TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.509424 %AT, 3765249 nt, 31758 terms. Intergenic: 0.574015 %AT, H2T: 640421 nt, 5646 terms; T2T: 193711 nt, 3948 terms; H2H: 260794 nt, 3919 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|16082691|ref|NC_003131.1| Yersinia pestis CO92 plasmid pCD1, complete sequence (length 70305) YPCD1.01 88 - 1110 + | putative transposase TERM 1 1191 - 1177 - g 77 -11.4 -3.3506 | overlap 1168 TGGAAAGCCTTATAA GCGCAG CGC CTGCGC TGTCACAACAGGCAG YPCD1.02 1110 - 1889 + | transposase/IS protein TERM 2 1972 - 1987 + T 76 -10.4 -3.03338 | ATCGCCTTAATTTCC GCGAGG ATGA CCTCGC TATTCCAGACATTCT yerA 3406 - 3014 - | secretion chaperone TERM 3 3538 - 3550 + H 76 -7.7 -4.11394 | CAGCGATTTTTTATA TAGCC ATC GGCTA TTTTCCCACTAAGAT yopE 3600 - 4259 + | putative outer membrane virulence protein TERM 4 4274 - 4292 + GT 73 -3 -4.99638 | opp_overlap 4272 4275, overlap 4275 ATATGGATAAAAACA AGGGGATA GTG TTTCCCCC TTTTTCTATCAATAT TERM 5 4291 - 4275 - gT 76 -6.5 -4.5448 | opp_overlap 4274 4275, overlap 4272 TATGGATAAAAACAA GGGGATA GTG TTTCCCC CTTTTTCTATCAATA TERM 6 4317 - 4346 + GT 80 -4.4 -5.06451 | gap 2, opp_overlap 4316, overlap 4316 4318 CAATATTGCGAATAT C--TTCGTCCCTGA TCTT TCAGGGGCGAATCG TTTTTTAGCATGCTC TERM 7 4318 - 4343 + GT 100 -14.1 -3.38726 | opp_overlap 4316, overlap 4316 4317 AATATTGCGAATATC TTCGTCCCTGA TCTT TCAGGGGCGAA TCGTTTTTTAGCATG YPCD1.08c 4698 - 4399 - | hypothetical protein YPCD1.07 4261 - 4557 + | hypothetical protein YPCD1.09c 4933 - 4691 - | hypothetical protein TERM 8 5551 - 5525 - R 100 -13.1 -4.72986 | TATCGCTATCAAAAA GCCGACATCAT GCTTA ATGACGTCGGC AGTCGACCAGGTCAG TERM 9 6172 - 6154 - R 73 -5.9 -4.55209 | opp_overlap 6154 TATACACTAAATAAA GGCGGGC AGACA ACCCACC TTGTTCTGATCTTAT sopB 7157 - 6195 - | plasmid-partitioning protein sopA 8323 - 7157 - | plasmid-partitioning protein SopA YPCD1.14n 9320 - 9123 - | hypothetical protein YPCD1.15c 9887 - 9429 - | hypothetical protein YPCD1.16c 10234 - 9911 - | hypothetical protein TERM 10 10880 - 10890 + r 85 -4 -5.4251 | AGCCAAGCATATTTT TATC TGA GATA TTTTTTATCTGTAGA yopQ 12110 - 11562 - | Yop targeting protein TERM 11 11664 - 11647 - G 80 -4.9 -5.16133 | opp_overlap 11650, overlap 11648 AGCATAATACAAAAA CGATGAA AATC TTCATCA TATAAATATTTTTTT TERM 12 11689 - 11706 + g 70 -4.9 -4.63527 | overlap 11690 TTTTTTATGTCATCA TTCTCTA TAAG TAGAGAG TTTTTCGGATCATAA TERM 13 12213 - 12203 - H 74 -4 -4.91712 | CGTAATTTATAAAAA TAGA ATA TCTA CTCTCAATGAGCTTC TERM 14 12869 - 12884 + G 73 -6.2 -4.46212 | CCTTCAGTATGATTA TGTATC GCAT GATACA TTTTGTACTCAGCAC yopT 12610 - 13578 + | Yop targeted effector sycT 13578 - 13976 + | YopT chaperone TERM 15 14058 - 14037 - T 70 -7.5 -3.8397 | opp_overlap 14034 14037 14039 ACATAGTTACAATAA TATCTATTA AATT TAATAGATA TGGTTTATATAATAA YPCD1.22c 14409 - 14020 - | hypothetical protein TERM 16 14985 - 15003 + G 73 -3 -4.93898 | opp_overlap 14973, overlap 14986 14989 AACGACTAGTGATAG CCACCGCA TTG TGCGCTGC TTTTTATGCTGGTAT YPCD1.23 14681 - 15100 + | hypothetical protein yopM 17565 - 16336 - | secreted effector protein TERM 17 17544 - 17534 - G 74 -4 -5.00616 | opp_overlap 17534 GGTTCTTGCAAAAAA GTAT TAG ATAC ATTTCTTGGATTTAT TERM 18 19200 - 19160 - R 70 -7.8 -3.73068 | gap 1, opp_overlap 19165 19166 19191 19191, overlap 19166 19191 TTTTTAATTTAATAA TCACAA-CCCTGGATTAAC TAAT GTTAATCCAGGGCTTTTCA GCACCTTATACCTTA TERM 19 19165 - 19194 + r 100 -13.7 -4.10007 | opp_overlap 19160 19166 19191, overlap 19166 19191 19191 AATTTAATAATCACA ACCCTGGATTAAC TAAT GTTAATCCAGGGC TTTTCAGCACCTTAT TERM 20 19193 - 19166 - R 100 -17.2 -3.6149 | opp_overlap 19166 19165 19191 19191, overlap 19160 19191 ATTTAATAATCACAA CCCTGGATTAAC TAAT GTTAATCCAGGG CTTTTCAGCACCTTA TERM 21 19166 - 19193 + r 100 -17.2 -3.05522 | opp_overlap 19160 19166 19191, overlap 19165 19191 19191 ATTTAATAATCACAA CCCTGGATTAAC TAAT GTTAATCCAGGG CTTTTCAGCACCTTA yopD 20214 - 19294 - | secreted effector protein yopB 21438 - 20233 - | secreted effector protein TERM 22 21046 - 21062 + g 91 -6.5 -5.14985 | opp_overlap 21045 21047, overlap 21047 GTTTTGTTCATGAAG ACGCTGA ATA TCAGCGA TTTTTATGTCTTTGC TERM 23 21047 - 21061 + g 77 -10 -3.67364 | opp_overlap 21047 21045, overlap 21046 TTTTGTTCATGAAGA CGCTGA ATA TCAGCG ATTTTTATGTCTTTG sycD 21922 - 21416 - | secretion chaperone lcrV 22915 - 21935 - | secreted effector protein TERM 24 22043 - 22053 + g 76 -3.2 -5.08824 | opp_overlap 22038, overlap 22038 TGATGTAATATCAGA CAGC TGA GTTG TTTTTTGGCTAACCA lcrG 23204 - 22917 - | low calcium response protein G lcrR 23686 - 23246 - | low calcium response protein R yscV 25797 - 23683 - | low calcium response protein D TERM 25 25102 - 25071 - G 78 -9.5 -3.89822 | CAGGTACCTGAGAAA CCATCCCATCCCC GACAGT GAGGATGGAATAG AGTTGCAGTGCCTCA yscY 26128 - 25784 - | hypothetical protein yscX 26493 - 26125 - | hypothetical protein sycN 26861 - 26490 - | hypothetical protein tyeA 27126 - 26848 - | Yop secretion and targeting control protein lcrE 27988 - 27107 - | secretion control protein TERM 26 28121 - 28138 + H 71 -4.1 -4.7497 | opp_overlap 28111 28110, overlap 28110 AAAACTCGCGGCTCC CGCTACA ATTT TTTAGCG TTTTTAGTCACTAAA TERM 27 28344 - 28375 + G 71 -11.6 -2.74605 | opp_overlap 28350, overlap 28341 28341 TTACTTACGTAACCC TGACAACAGCCTGT CTTT ACAGGCTGAAGTCA TAGGTTTTGCCCAAC TERM 28 28369 - 28350 - g 79 -12.2 -3.3344 | opp_overlap 28344 28341 28341 ACGTAACCCTGACAA CAGCCTGT CTTT ACAGGCTG AAGTCATAGGTTTTG yscN 28186 - 29505 + | type III secretion system ATPase yscO 29502 - 29966 + | type III secretion apparatus component yscP 29966 - 31333 + | type III secretion apparatus component yscQ 31330 - 32253 + | type III secretion system protein yscR 32250 - 32903 + | type III secretion system protein yscS 32905 - 33171 + | needle complex export protein TERM 29 33635 - 33647 + G 70 -4.7 -4.67011 | opp_overlap 33633 33632, overlap 33633 33632 CAGCTATGTAAATTG GCCGG TGG CCAGC TTTTTCCCTGCAGTT yscT 33168 - 33953 + | needle complex export protein yscU 33953 - 35017 + | needle complex export protein TERM 30 35376 - 35414 + F 100 -15.6 -4.03234 | opp_overlap 35382, overlap 35377 CTGATTCCGATTCTA ACCAAACATCCTTTTTTT ATG AAAGAAAGGATGTTTGGC TTTATATGCGCAAGG TERM 31 35377 - 35413 + F 100 -19.1 -3.01726 | opp_overlap 35382, overlap 35376 TGATTCCGATTCTAA CCAAACATCCTTTTTTT ATG AAAGAAAGGATGTTTGG CTTTATATGCGCAAG TERM 32 35408 - 35382 - f 83 -9.6 -3.91911 | opp_overlap 35377 35376 CCGATTCTAACCAAA CATCCTTTTTTT ATG AAAGAAAGGATG TTTGGCTTTATATGC TERM 33 35785 - 35795 + G 73 -5.4 -4.73973 | opp_overlap 35783 35785 ACTCATTTCGAAACA GGTA ACC TACC TTTATTCTTTTCTAT virG 35593 - 35988 + | needle complex outer membrane lipoprotein precursor virF 36112 - 36927 + | transcriptional regulator yscA 37006 - 37104 + | hypothetical protein yscB 37330 - 37743 + | type III secretion apparatus component TERM 34 39048 - 39036 - g 72 -4.1 -4.87291 | GATGGGAACCAAAAA CCGAA TAG TTCAG GGATTGACGGAATCC TERM 35 39235 - 39249 + G 74 -10 -3.57406 | opp_overlap 39223 39232, overlap 39234 AAAGTGAGTTAACTC GCCGTA CGG TACGGC TGTTTATCATCGAAC yscC 37749 - 39572 + | outer membrane secretin precursor TERM 36 39923 - 39902 - g 71 -5.1 -4.55287 | CCCACGCAGAGAAAA GAGCCAACC GACA GGTTACCTC GTTCACGACTTGGGA yscD 39569 - 40828 + | virulence protein yscE 40825 - 41025 + | type III secretion apparatus component yscF 41026 - 41289 + | needle complex major subunit yscG 41291 - 41638 + | type III secretion apparatus component TERM 37 41840 - 41870 + G 73 -9.1 -3.65351 | TTCTTGAGGTTTTGG CGACGCCAGT-ACGT GAG GCGTTACTGGCG-CG TTTCGGTCAACATCA yopR 41635 - 42132 + | secreted protein lcrO 42133 - 42480 + | type III secretion apparatus component ylpB 42487 - 43221 + | needle complex inner membrane lipoprotein yscK 43221 - 43850 + | type III secretion apparatus component yscL 43796 - 44461 + | type III secretion system protein lcrQ 44686 - 45033 + | LCR negative regulator lcrS 45581 - 45847 + | putative transposase ORFC 46302 - 46610 + | putative transposase TERM 38 46875 - 46896 + T 78 -8.7 -3.74693 | TTTATTATCGAGTTC GGTGACCGT CTAA ACGATCACC TTTAATACAGTGGCG TERM 39 47049 - 47013 - T 77 -11.2 -2.85999 | opp_overlap 47012 47017, overlap 47017 TTATTCTACAGCAGA TAAACCTCAACTAA TTGCTTACT TTAGTTGAGGTTTA AAGTTTCTTTGATTG TERM 40 47017 - 47045 + T 72 -7.6 -3.78141 | opp_overlap 47013 47017, overlap 47012 TCTACAGCAGATAAA CCTCAACTAA TTGCTTACT TTAGTTGAGG TTTAAAGTTTCTTTG TERM 41 47045 - 47017 - T 76 -7.6 -4.11404 | opp_overlap 47017 47012, overlap 47013 TCTACAGCAGATAAA CCTCAACTAA TTGCTTACT TTAGTTGAGG TTTAAAGTTTCTTTG yopH 48528 - 47122 - | putative secreted protein-tyrosine phosphatase TERM 42 48117 - 48081 - G 100 -26.7 -2.54523 | CTAGATGTGAACGCA GTCCTTCACGCACCGGG GTT CCCGGTGCGTGAAGGGC TGAATGTGAATGAGA TERM 43 50103 - 50077 - R 73 -5.1 -4.65895 | opp_overlap 50078, overlap 50078 GGGGTGACGGAAAAA TCTGGGATTCC GGCGT AGAACCCCAGT TAATCTGTTTCTTCA yopJ 51077 - 50211 - | targeted effector protein TERM 44 51275 - 51261 - R 78 -5.8 -4.77757 | opp_overlap 51261 51260 TGCGAAAAAGGAAAA TTTGAT AGC ATCAAA AATTTTCTCTATTAC ypkA 53671 - 51473 - | secreted protein kinase TERM 45 53515 - 53505 - G 74 -2.4 -5.14985 | CGAAAGAGAGAAAAA CCAC TGT GGGG GTTCAAGCGCAACAC YPCD1.73c 54128 - 53679 - | hypothetical protein TERM 46 53948 - 53915 - G 100 -5.9 -5.84432 | gap 1, opp_overlap 53925, overlap 53916 TATAACAGAAAAAAA GCT-GACTAGCGGCGC TGC GCGCCTCTGGTCCAGA AAATCCTAAGATTGG TERM 47 53947 - 53916 - G 77 -9.4 -4.08219 | gap 1, opp_overlap 53925, overlap 53915 ATAACAGAAAAAAAG CT-GACTAGCGGCGC TGC GCGCCTCTGGTCCAG AAAATCCTAAGATTG TERM 48 54783 - 54772 - R 78 -7.2 -4.45168 | GTTGCAAAAGACAAA GGCG GCTT CGCC TTGCCAGGGCTGATG TERM 49 55708 - 55751 + r 91 -7.9 -4.7497 | opp_overlap 55708 55709, overlap 55707 AACACTCATTGTAAA GCCACTCTGTTCCGGGCCG TTGGCC CGGGGCGGGGCGGGGCGGC TTTTTAGTGGGTAAG TERM 50 55746 - 55708 - R 70 -7.8 -3.61922 | opp_overlap 55707 55708, overlap 55709 AACACTCATTGTAAA GCCACTCTGTTCCGGGCC GTT GGCCCGGGGCGGGGCGGG GCGGCTTTTTAGTGG TERM 51 55745 - 55709 - R 81 -11.3 -2.76671 | opp_overlap 55707 55708, overlap 55708 ACACTCATTGTAAAG CCACTCTGTTCCGGGCC GTT GGCCCGGGGCGGGGCGG GGCGGCTTTTTAGTG repA1 57157 - 56291 - | replication protein TERM 52 56802 - 56783 - G 76 -4.8 -4.9792 | overlap 56785 CAGCTCAGATAAAAA GCGCAGCG CACG CGTGGCGC GGGTGATGGAAAGGT tap 57224 - 57150 - | repA translation protein TERM 53 57238 - 57264 + r 83 -8.9 -4.18018 | gap 1 ATGCACATATACTCC CTGTATAG-AGC AACA GCTTCTATACAG TTTTAAGTGGGCCCC TERM 54 57276 - 57322 + r 90 -7.4 -5.1417 | gap 1 ACAGTTTTAAGTGGG CCCCGGTAACCTTC-TCGCCT CGCCAA AGATGAGGAAGTTTATCGGGG TTTTTGCTTTTCTGG copB 57720 - 57466 - | replication protein TERM 55 59909 - 59873 - R 100 -28.3 -3.35798 | opp_overlap 59878, overlap 59878 ACTGCGTACTGATAA GTAAACCAATGGGCGGC CAT GCCGCCCATTGGTTTAC TCCAGCGCCGCGTAA TERM 56 59904 - 59878 - R 100 -22.4 -4.00868 | opp_overlap 59878, overlap 59873 GTACTGATAAGTAAA CCAATGGGCGGC CAT GCCGCCCATTGG TTTACTCCAGCGCCG TERM 57 59878 - 59904 + r 100 -22.4 -3.72576 | opp_overlap 59878 59873 GTACTGATAAGTAAA CCAATGGGCGGC CAT GCCGCCCATTGG TTTACTCCAGCGCCG TERM 58 60506 - 60531 + r 74 -6.9 -4.35518 | opp_overlap 60501 60506 AGCATATTAATAAAA CACCAATTACG ATTA TGTAATCGGTG TTTTCCTATAGACTT TERM 59 60531 - 60506 - R 100 -8.4 -4.76075 | opp_overlap 60506, overlap 60501 AGCATATTAATAAAA CACCAATTAC GATTAT GTAATCGGTG TTTTCCTATAGACTT TERM 60 61026 - 61038 + r 71 -3.4 -5.0133 | AAGTTGTTCTGGCAA CACT ATTTG AGTG TTTTTTGGCCGCATC TERM 61 61616 - 61626 + r 73 -5.4 -4.62054 | GGTTGTATTGCTTCT GCTA ATC TAGC TCTTTTTTTTCTGGA tnpA 65166 - 62851 - | putative transposase TERM 62 64279 - 64296 + g 72 -9.9 -3.35774 | opp_overlap 64250 TCTCCAGGTTTCATC CAGTTGG ACCG CCAACTG TTGTACGCCTTTATG tnpR 65330 - 65881 + | putative resolvase TERM 63 66212 - 66200 - g 70 -3.4 -4.87803 | GACGTTGAAAGAAAA GAAC TTACG GTTC AGTTTACATATAGCA YPCD1.91n 65900 - 66364 + | hypothetical protein YPCD1.92 66503 - 66832 + | hypothetical protein YPCD1.93 66932 - 67198 + | putative transposase YPCD1.94 67222 - 68031 + | putative transposase sycH 68604 - 68179 - | secretion chaperone YPCD1.96c 69378 - 68947 - | putative transposase YPCD1.97c 70304 - 69378 - | putative transposase SEQUENCE gi|16082679|ref|NC_003132.1| Yersinia pestis CO92 plasmid pPCP1, complete sequence (length 9612) YPPCP1.01 87 - 1109 + | putative transposase TERM 1 1190 - 1176 - g 77 -11.4 -3.3506 | overlap 1167 TGGAAAGCCTTATAA GCGCAG CGC CTGCGC TGTCACAACAGGCAG YPPCP1.02 1106 - 1888 + | transposase/IS protein TERM 2 2356 - 2372 + F 73 -2.9 -5.23016 | TTCGTTGTAACGCGA TTTTCCG TAC CGGGCAA TTTTTTCAGTTGTTT TERM 3 2632 - 2651 + F 89 -3.5 -5.67063 | overlap 2635 ATGTGTCAGACTTCG TTCTCCC CCTTCC GGGTGAA TTTTTTTGTCATCCG TERM 4 2785 - 2753 - f 95 -7.5 -5.58209 | TCAAAGGCAAAAAAA TCCCCCGGAACAGGC GGA ACCCGGACAGGGGGA GAACGAATCGCTAAA rop 2925 - 3119 + | putative replication regulatory protein TERM 5 3169 - 3124 - f 100 -12.6 -3.55453 | gap 1, overlap 3109 3160 CAGGAACATAACGAA GCTCCCGG-AGACGGTCACAG CTTGT CTGTGAACGGATGCCGGGAGC AGACAAGCCCGTCAG TERM 6 3518 - 3530 + F 100 -10.5 -4.66609 | opp_overlap 3515 3516, overlap 3515 ACCCCAGAAAAGGCC GCGCC GGA GGCGC TTTTTCCATAGGCTC TERM 7 4033 - 4068 + F 100 -14.2 -3.53012 | opp_overlap 4041, overlap 4041 GAAACTTCTAACCTT CGAAAGAACCCACG CCTGAGAA CGTGGGTTTTTTCG TTTACAGGCAGCAGA TERM 8 4041 - 4060 + F 89 -6.4 -5.37593 | opp_overlap 4041, overlap 4033 TAACCTTCGAAAGAA CCCACG CCTGAGAA CGTGGG TTTTTTCGTTTACAG TERM 9 4060 - 4041 - f 74 -7.8 -3.9243 | opp_overlap 4033 4041 TAACCTTCGAAAGAA CCCACGCC TGAG AACGTGGG TTTTTTCGTTTACAG TERM 10 4101 - 4117 + F 71 -6.6 -4.10958 | opp_overlap 4101 4113, overlap 4113 ACGCGCAGAAAAAAA GGATCT CAAGA AGATCC TTTGATCTTTTCTAC TERM 11 4117 - 4101 - f 100 -7.3 -5.61596 | opp_overlap 4101 4113, overlap 4113 ACGCGCAGAAAAAAA GGATCTC AAG AAGATCC TTTGATCTTTTCTAC pim 4355 - 4780 + | pesticin immunity protein TERM 12 4808 - 4787 - T 100 -14.5 -3.40163 | opp_overlap 4784 4784 4778 4798 TATCATTAATAGCAA GCCCCTCAT TATT ATGAGGGGC TCATGGTTATTTTAA pst 5888 - 4815 - | pesticin TERM 13 5969 - 5935 - H 100 -14.6 -5.87688 | ATAAGTTAAAAAAAA TACTGTACATAAAACC ACT GTTTTTATGTACAGTA ATAAAATTACGCCGC YPPCP1.06 6006 - 6422 + | hypothetical protein TERM 14 6865 - 6841 - g 74 -7.1 -4.37337 | AGAAACAGGAAGAAA GATCAGCCAGT TAG ACTGGAAGATC AAAAATGTCGCTATC TERM 15 6916 - 6963 + G 70 -11.4 -2.64933 | gap 1 GGATCCATACTCATT TCTGACCCTGAATGCCAGGGG GTGGACG TCTCTGGC-TTCCGGGTCAGG TAATATGGATGACTA TERM 16 7211 - 7237 + G 73 -5.8 -4.54449 | opp_overlap 7211 AACTTCCCGAAAGGA GTGCGGGTAATA GGT TATAACCAGCGC TTTTCTATGCCATAT pla 6665 - 7603 + | outer membrane protease TERM 17 7629 - 7652 + T 100 -16.8 -2.87132 | overlap 7631 TCATATCTCTCTTTT CATCCTCCCC TAGC GGGGAGGATG TCTGTGGAAAGGAGG TERM 18 7631 - 7650 + T 100 -13.6 -2.98823 | overlap 7629 ATATCTCTCTTTTCA TCCTCCCC TAGC GGGGAGGA TGTCTGTGGAAAGGA TERM 19 7687 - 7663 - T 71 -8.6 -3.53444 | overlap 7666 GGATGTCTGTGGAAA GGAGGTTGGT GTTTG ACCAACCTTC AGATGTGTGAAAAAT YPPCP1.08c 8089 - 7790 - | putative transcriptional regulator TERM 20 7903 - 7913 + g 71 -6.8 -4.2704 | TTAAATCATTTCCGC GCTG CTC CAGC TTTGTTACTGCTGGC YPPCP1.09c 8436 - 8089 - | hypothetical protein SEQUENCE gi|16082781|ref|NC_003134.1| Yersinia pestis CO92 plasmid pMT1, complete sequence (length 96210) YPMT1.01 87 - 1109 + | putative transposase TERM 1 1190 - 1176 - g 77 -11.4 -3.3506 | overlap 1167 TGGAAAGCCTTATAA GCGCAG CGC CTGCGC TGTCACAACAGGCAG YPMT1.02 1109 - 1888 + | transposase/IS protein YPMT1.03c 2630 - 2022 - | tail fiber assembly protein G TERM 2 2378 - 2389 + g 71 -7.2 -4.11404 | opp_overlap 2376 2378, overlap 2369 GTTCAGCGATGAACA CCGG TTCA CCGG TTTCTGTGCTGTAAA YPMT1.04c 5868 - 2932 - | putative phage tail protein TERM 3 4982 - 5016 + g 83 -12.8 -3.6106 | overlap 4984 5013 GCTTCATTTTCACTA TTGGCTGCCGCTGCTT CTG AAGCAGCAGCAGCCTC TTTAGAGGTCTTGGC TERM 4 4984 - 5014 + g 100 -19.8 -3.38201 | overlap 4982 5013 TTCATTTTCACTATT GGCTGCCGCTGCTT CTG AAGCAGCAGCAGCC TCTTTAGAGGTCTTG TERM 5 5107 - 5137 + g 70 -8.2 -3.68726 | CGCAGCAGCCTTGCT TTCAGCCGCATTGG TCT CTGACGCGGCAGAA TTATCTTCAGATGTT TERM 6 5223 - 5246 + g 71 -5.2 -4.46926 | overlap 5225 CCGATGCTTTTGATG CAGCGGCA CTTAGCTC TGCCGCAG TTTTATACTCAGATG TERM 7 5856 - 5837 - G 70 -9.2 -3.53012 | TTCGCTCCTTGTAAA GGCGGGCA TCCC TGCTCGCC ATAGGTAATCACTTA TERM 8 5921 - 5896 - R 71 -4.7 -4.63044 | gap 1 ACCGATATAAAGAAA GATGTCTACCGC CGA GCAG-AGCCATC CCCCCACCCGACCTG YPMT1.05c 6518 - 5901 - | hypothetical protein YPMT1.06c 11173 - 6536 - | host specificity protein J YPMT1.07c 11776 - 11189 - | putative phage tail protein YPMT1.08c 12561 - 11764 - | putative phage tail protein YPMT1.09c 13285 - 12554 - | minor tail fiber protein L TERM 9 13299 - 13273 - G 83 -9.4 -4.41348 | overlap 13275 CTTCCTTGAAATAAA GAGGCGCCAACA TCC TGTCAGCGCCTA TAGATAATAGTAAAT TERM 10 13297 - 13275 - G 86 -12 -3.81557 | overlap 13273 TCCTTGAAATAAAGA GGCGCCAACA TCC TGTCAGCGCC TATAGATAATAGTAA YPMT1.10c 13677 - 13342 - | minor tail fiber protein M YPMT1.11c 18296 - 13719 - | hypothetical protein TERM 11 15118 - 15143 + g 82 -10.5 -3.94409 | gap 1, overlap 15117 TCGTCGCTCGCGTTC GCCAGGTCAGCG AGG CG-TGACTTGGC TTTGTCGATCATCTC TERM 12 16763 - 16773 + g 76 -6.8 -4.56597 | opp_overlap 16763 TGCCCAGGCTGATAA CCAG CTC CTGG TTTTTAGCCAGCCAC TERM 13 18080 - 18092 + g 78 -6.3 -4.85599 | GCTCGAAGCCGGCAG CTACA TCC TGTAG TTTTTCTGCCGTGAC YPMT1.12c 18573 - 18304 - | hypothetical protein YPMT1.13c 18971 - 18654 - | hypothetical protein TERM 14 19014 - 18992 - R 76 -7.7 -4.0896 | opp_overlap 18992 18994, overlap 18981 18994 AAAGTCCTTTTAAAA GAGAGGCTC TTCCT GAGCCTCTG CTTAATTACGTCGCG TERM 15 18994 - 19012 + r 75 -10.3 -2.8507 | opp_overlap 18992 18994, overlap 18992 AGTCCTTTTAAAAGA GAGGCTC TTCCT GAGCCTC TGCTTAATTACGTCG TERM 16 19012 - 18994 - R 82 -10.3 -3.63922 | opp_overlap 18994 18992, overlap 18992 AGTCCTTTTAAAAGA GAGGCTC TTCCT GAGCCTC TGCTTAATTACGTCG YPMT1.14c 19777 - 19031 - | hypothetical protein TERM 17 19239 - 19278 + g 84 -10.8 -4.10453 | gap 1, opp_overlap 19276, overlap 19228 19274 AGTTGCACGGTCTCA CCGGCTTTAACT-TCCGGA GAT TCCGGAGAGATAGAGACGG TTTTAACCGGCTTTG YPMT1.15c 20235 - 19852 - | hypothetical protein YPMT1.16c 20710 - 20237 - | hypothetical protein YPMT1.17c 21159 - 20701 - | hypothetical protein YPMT1.18c 21976 - 21143 - | hypothetical protein YPMT1.19c 22410 - 21976 - | hypothetical protein TERM 18 22424 - 22449 + r 95 -12.7 -3.33696 | gap 1, opp_overlap 22427, overlap 22425 22427 ATTCTTCTTCTCACT TA-ATGGGCGGC TAT GCCGCCCATGTA TTGGTTACGCAGCCG TERM 19 22425 - 22447 + r 100 -13.4 -3.23853 | opp_overlap 22427, overlap 22424 22427 TTCTTCTTCTCACTT AATGGGCGGC TAT GCCGCCCATG TATTGGTTACGCAGC TERM 20 22445 - 22427 - R 100 -16 -3.05384 | opp_overlap 22427 22425 22424 CTTCTTCTCACTTAA TGGGCGGC TAT GCCGCCCA TGTATTGGTTACGCA TERM 21 22427 - 22445 + r 100 -16 -3.18366 | opp_overlap 22427, overlap 22425 22424 CTTCTTCTCACTTAA TGGGCGGC TAT GCCGCCCA TGTATTGGTTACGCA YPMT1.20c 23116 - 22454 - | hypothetical protein TERM 22 23135 - 23155 + r 100 -14 -3.10164 | opp_overlap 23135 TCGCTCCTACAAAAA GGGTGGGC GTATA GCCCACCC TTAAATGGTAGATAA TERM 23 23155 - 23135 - R 100 -14 -4.82901 | opp_overlap 23135 TCGCTCCTACAAAAA GGGTGGGC GTATA GCCCACCC TTAAATGGTAGATAA YPMT1.21c 24066 - 23191 - | hypothetical protein YPMT1.22c 24926 - 24093 - | hypothetical protein YPMT1.23c 26538 - 24949 - | hypothetical protein YPMT1.24c 27813 - 26557 - | hypothetical protein TERM 24 27523 - 27550 + g 74 -2.6 -5.06414 | overlap 27526 GATTTCAGAGCCGTT CTTCAGCACGAT GGTC ATCGTGGTGTCG TTTTTCTTACGAACC TERM 25 27610 - 27652 + g 80 -9.8 -4.04188 | ATCCCACAAGATCTG GCGAGCCATCTGGTACGTCG GTG CGACGTACCAGACACGTTGC TTCTTCTCTTTGGCT YPMT1.25c 28457 - 27816 - | hypothetical protein TERM 26 28424 - 28442 + g 72 -3.8 -4.86001 | ACTCAGCTGGCGTCA GGCGAG TTTTGCT CTCGTC TTTTTCTACAGTCAT TERM 27 28627 - 28573 - R 89 -11.9 -3.37796 | gap 2, opp_overlap 28591 28594 GGGGAGTATTCAGAA CCTGCTTCCGTATATAT--TTAATAAG TCA CTTAGTATTTATATATACGGAAGCAGG CTCTCAAACTGGCTC YPMT1.25Ac 28919 - 28653 - | hypothetical protein YPMT1.26c 29828 - 28929 - | hypothetical protein YPMT1.26Ac 30079 - 29825 - | hypothetical protein TERM 28 29955 - 29967 + g 83 -9.1 -4.34267 | opp_overlap 29928 29929 29954 29955 TTGATCATCAGCAAC GCCAG ACT CTGGC TTTTACCTTCTCTGG YPMT1.27c 30710 - 30072 - | putative ABC transporter ATP-binding protein TERM 29 30390 - 30409 + g 80 -10 -4.08945 | gap 1, opp_overlap 30386 30389 30384, overlap 30392 GGCCATAGACAGCAG CC-CCAGCG CAT CGCTGGTGG TTTTGCCCAACTGGT TERM 30 30392 - 30406 + g 74 -11.4 -3.08211 | opp_overlap 30386 30389 30384, overlap 30390 CCATAGACAGCAGCC CCAGCG CAT CGCTGG TGGTTTTGCCCAACT YPMT1.28c 31375 - 30707 - | hypothetical protein TERM 31 31265 - 31303 + g 74 -2.5 -5.10029 | overlap 31267 31273 31277 AAAACCGCGCTTTTT GATGGCGG-CAGCCAGGTC GCG GATCTG-CTGTTCGTCATG TTTTTTGGCGTTCAT YPMT1.29c 32073 - 31375 - | hypothetical protein TERM 32 32386 - 32372 - g 74 -4.2 -4.8622 | opp_overlap 32376 GTGCGCAAGGAAAAA GCCC CCGCGCT GGGC AAGCCGAACCCGGTA YPMT1.30 32138 - 33697 + | hypothetical protein YPMT1.31 33700 - 33978 + | hypothetical protein TERM 33 33987 - 34002 + F 86 -10.4 -3.8186 | opp_overlap 33986 33987 CGATTAAGCATTAAG GGCGTC GCAA GACGCC TTGTTCGTTGAAGTG TERM 34 34002 - 33987 - f 74 -10.4 -2.57136 | opp_overlap 33987, overlap 33986 CGATTAAGCATTAAG GGCGTC GCAA GACGCC TTGTTCGTTGAAGTG YPMT1.32 34038 - 34460 + | putative lipoprotein YPMT1.33 34465 - 34992 + | putative transcriptional regulator TERM 35 35004 - 35029 + F 100 -10.6 -4.62471 | opp_overlap 35010 TTAAATCTATAAGGG TAATAACCGG CTAAGT CCGGTTATTA TTTTATGTGTCACTT YPMT1.34 35314 - 35964 + | hypothetical protein TERM 36 36002 - 35969 - f 100 -16.3 -3.3907 | gap 1, opp_overlap 35978 TCAAAGCGTAATTAA TTGAATATAGCGCCCA CTA TGGGCGCT-TATTCAA AAGATCTTAAGTCTG TERM 37 35978 - 35994 + F 100 -13.7 -3.62224 | opp_overlap 35969 AATTAATTGAATATA GCGCCCA CTA TGGGCGC TTATTCAAAAGATCT YPMT1.34A 36049 - 36276 + | hypothetical protein TERM 38 36306 - 36280 - f 100 -9.4 -5.69262 | opp_overlap 36285, overlap 36283 36285 TTAGAAAAATAAAAA CAATAGCGCCCA CTA TGGGCGCTTTTT TCGTTTCAAGATCCG TERM 39 36303 - 36283 - f 100 -11.1 -4.855 | opp_overlap 36285, overlap 36280 36285 GAAAAATAAAAACAA TAGCGCCCA CTA TGGGCGCTT TTTTCGTTTCAAGAT TERM 40 36301 - 36285 - f 100 -13.7 -3.97385 | opp_overlap 36285, overlap 36283 36280 AAAATAAAAACAATA GCGCCCA CTA TGGGCGC TTTTTTCGTTTCAAG TERM 41 36285 - 36301 + F 100 -13.7 -5.37593 | opp_overlap 36283 36280 36285 AAAATAAAAACAATA GCGCCCA CTA TGGGCGC TTTTTTCGTTTCAAG TERM 42 36349 - 36332 - f 100 -12.7 -3.4678 | opp_overlap 36332 ATCCGCACACCATAA CGCGCCA TTGT TGGCGCG TTTTTTATTGTCTGA TERM 43 36332 - 36349 + F 100 -12.7 -5.60689 | opp_overlap 36332 ATCCGCACACCATAA CGCGCCA TTGT TGGCGCG TTTTTTATTGTCTGA TERM 44 36911 - 36887 - g 71 -7.1 -4.25283 | opp_overlap 36887, overlap 36891 ACTGGTGGACGAAAA GAAAGGGGC GTTTCCA GCCCCTCCC CTCTTACTTGCCAGC TERM 45 36907 - 36891 - g 79 -6.5 -4.72007 | opp_overlap 36887, overlap 36887 GTGGACGAAAAGAAA GGGGC GTTTCCA GCCCC TCCCCTCTTACTTGC YPMT1.34N 36577 - 36936 + | hypothetical protein YPMT1.35c 37397 - 36915 - | hypothetical protein YPMT1.35N 37643 - 37410 - | hypothetical protein TERM 46 37594 - 37575 - GR 79 -10.7 -3.06302 | opp_overlap 37572 37575, overlap 37564 37561 37562 37559 AGGATGGCCATTTAA GGCCACC AGCATG GGTGGCC TCGTTCTCTTAGTGG TERM 47 37575 - 37594 + gr 79 -10.7 -2.95751 | opp_overlap 37564 37561 37562 37559 37575, overlap 37572 AGGATGGCCATTTAA GGCCACC AGCATG GGTGGCC TCGTTCTCTTAGTGG YPMT1.36c 37890 - 37603 - | hypothetical protein TERM 48 38006 - 37982 - R 93 -9.9 -4.30987 | opp_overlap 37985, overlap 37984 37985 ATCGGGTATAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCATATGCGCCTAT TERM 49 38004 - 37984 - R 100 -12.5 -3.75817 | opp_overlap 37985, overlap 37982 37985 CGGGTATAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 50 37985 - 38003 + r 100 -16 -4.8048 | opp_overlap 37985 37984 37982 GGGTATAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 51 38003 - 37985 - R 100 -16 -2.85008 | opp_overlap 37985, overlap 37984 37982 GGGTATAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC YPMT1.37c 38593 - 38084 - | putative transposase TERM 52 38655 - 38673 + r 100 -16 -4.36914 | opp_overlap 38655 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 53 38673 - 38655 - R 100 -16 -3.07307 | opp_overlap 38655 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 54 38692 - 38711 + r 93 -12.2 -3.71998 | opp_overlap 38692 TCTGGGCACAAAAAA GGCCACTA AATA TAGTGGCC TTATGTTAATAGATA TERM 55 38711 - 38692 - R 100 -12.2 -5.24129 | opp_overlap 38692 TCTGGGCACAAAAAA GGCCACTA AATA TAGTGGCC TTATGTTAATAGATA YPMT1.38c 39320 - 38751 - | hypothetical protein YPMT1.39c 40079 - 39333 - | hypothetical protein TERM 56 39947 - 39957 + g 70 -3.2 -4.77757 | ATACCGAGAACTGGT CGTC ATT GATG TTTTCGTTTTTCCAC YPMT1.40c 41985 - 40069 - | putative exonuclease subunit 2 YPMT1.40Ac 42218 - 41994 - | hypothetical protein YPMT1.41c 43300 - 42215 - | putative exonuclease subunit 1 YPMT1.42 43716 - 44738 + | putative periplasmic protein TERM 57 44747 - 44775 + T 82 -10.3 -3.65902 | opp_overlap 44749, overlap 44749 CAAATAGTCTCATTA CAGGCGGTTGTCT ACT GGACAATCGCCTA TTTACCTGGAGTGCA TERM 58 44749 - 44773 + T 100 -12.9 -3.41073 | opp_overlap 44749, overlap 44747 AATAGTCTCATTACA GGCGGTTGTCT ACT GGACAATCGCC TATTTACCTGGAGTG TERM 59 44773 - 44749 - T 72 -10 -2.79679 | opp_overlap 44747 44749 AATAGTCTCATTACA GGCGGTTGTC TACTG GACAATCGCC TATTTACCTGGAGTG YPMT1.42Ac 45022 - 44876 - | hypothetical protein YPMT1.43c 45742 - 45098 - | hypothetical protein TERM 60 46025 - 46004 - H 74 -6.5 -4.44797 | opp_overlap 46019 CTATGAAGAGCAAAA CAACCTCTC TGGA GAGTGGTCG GTATCCACTGTAGTG TERM 61 46402 - 46390 - H 70 -2.6 -4.96762 | opp_overlap 46399, overlap 46398 TAGAGAGTAGAAAAA CCAC TATAG GCGG TAGGATAACCGCTGT YPMT1.44 46487 - 47551 + | putative replication protein A TERM 62 47576 - 47600 + T 100 -8.6 -5.05113 | opp_overlap 47576 TGTAGAGAGTAGAAA GGCTCACTAT CCGCT GTAGTGGGCC TTTTGTTTATCTGAA TERM 63 47741 - 47753 + T 70 -7.7 -3.68073 | GCTGCGAGGTTAGTG GTCAC TGG GTGAC TTGTTAAATCCACTC TERM 64 48028 - 48045 + T 74 -6.9 -4.2828 | CACTACAGTGGATAC CGGATGC CACG GCAGCCG TTTTACTCACTACAG YPMT1.45c 48335 - 48120 - | hypothetical protein YPMT1.46c 48667 - 48332 - | hypothetical protein YPMT1.46Ac 48843 - 48664 - | hypothetical protein YPMT1.46Bc 49159 - 48884 - | hypothetical protein YPMT1.47c 49637 - 49227 - | hypothetical protein YPMT1.48c 49992 - 49621 - | hypothetical protein TERM 65 50020 - 50032 + r 75 -5.5 -4.8622 | TCTTTCAGAAATTGC GTGGC GTT GTCAC TTTTTACTTCAACGG TERM 66 50109 - 50128 + r 74 -9.2 -3.24232 | opp_overlap 50110, overlap 50107 50105 50110 ATACGGAAATAAAAA AGGCGTCC AAGT GGACGCCG TATCTTTGAAAAGGG TERM 67 50110 - 50127 + r 86 -12.7 -2.54325 | opp_overlap 50110, overlap 50109 50107 50105 TACGGAAATAAAAAA GGCGTCC AAGT GGACGCC GTATCTTTGAAAAGG TERM 68 50127 - 50110 - R 100 -12.7 -5.65927 | opp_overlap 50109 50107 50105 50110 TACGGAAATAAAAAA GGCGTCC AAGT GGACGCC GTATCTTTGAAAAGG YPMT1.49c 50976 - 50146 - | putative lipoprotein YPMT1.49Ac 51180 - 50980 - | hypothetical protein TERM 69 51248 - 51264 + r 100 -15.1 -3.52539 | opp_overlap 51248, overlap 51237 TTTCAAGTATAAAAA GGCGCCC AAT GGGCGCC TTGTGATTACGCTTC TERM 70 51264 - 51248 - R 100 -15.1 -4.98255 | opp_overlap 51248 51237 TTTCAAGTATAAAAA GGCGCCC AAT GGGCGCC TTGTGATTACGCTTC YPMT1.50c 52347 - 51271 - | putative recombinase TERM 71 52286 - 52301 + g 80 -3.2 -5.26119 | GAGACCTTCTGAATC TCGTCA TTGC TGCCGA TTTTCTTTTTCAGCG YPMT1.50Ac 52616 - 52350 - | hypothetical protein YPMT1.51c 53560 - 52616 - | putative exonuclease TERM 72 53604 - 53581 - R 100 -15.4 -4.57073 | opp_overlap 53585 CACTCCTTCCAAAAA GTAAGGCGTC CGTA GACGCCTTAC TGGTCACGTTATGGG TERM 73 53585 - 53600 + r 77 -10.4 -3.22223 | opp_overlap 53581 CCTTCCAAAAAGTAA GGCGTC CGTA GACGCC TTACTGGTCACGTTA YPMT1.52c 54649 - 53621 - | hypothetical protein YPMT1.53c 55242 - 54769 - | hypothetical protein TERM 74 55680 - 55697 + H 83 -9.1 -4.1552 | overlap 55696 AAAAATAGTAGTTAG TGGCGGT TTTG GCCGCCA TTTGTTCCAAAGGTA YPMT1.54 55745 - 56308 + | hypothetical protein TERM 75 56307 - 56336 + T 100 -15.1 -3.91473 | opp_overlap 56314, overlap 56314 ACGCCGAATGCGCAT GAAAAAACCCGCC GATT GGCGGGTTTTTGC TTTATGCGACTTTCT TERM 76 56329 - 56314 - T 100 -11.8 -5.14965 | opp_overlap 56314 56307 ATGCGCATGAAAAAA CCCGCC GATT GGCGGG TTTTTGCTTTATGCG TERM 77 56314 - 56329 + T 100 -11.8 -5.04601 | opp_overlap 56314, overlap 56307 ATGCGCATGAAAAAA CCCGCC GATT GGCGGG TTTTTGCTTTATGCG YPMT1.55c 56781 - 56338 - | hypothetical protein YPMT1.57c 58115 - 57333 - | transposase/IS protein TERM 78 58031 - 58045 + g 77 -11.4 -3.3506 | overlap 58044 CTGCCTGTTGTGACA GCGCAG GCG CTGCGC TTATAAGGCTTTCCA YPMT1.58c 59134 - 58112 - | transposase TERM 79 59156 - 59138 - R 100 -13.2 -4.01078 | AAAAGTGACCATAAA CTCTCCTG AAT CAGGAGAG CAGATTACCCCCTGG YPMT1.59c 61267 - 59258 - | putative DNA-binding protein TERM 80 61301 - 61332 + r 70 -9.5 -2.82942 | gap 2, overlap 61300 TATTGATGATTGTCT G-GCCCTG-CGGAGT TCGC GCTCCGGCAGGGCAC CTCTTTCTTACTGCG YPMT1.60c 61570 - 61340 - | hypothetical protein TERM 81 61861 - 61839 - R 100 -14.8 -3.61398 | CGTTGCCCCGAAGAA GCCCGGCAGC ATT ACCGCCGGGC TGGTGAGAGCGGCGC TERM 82 61942 - 61963 + r 89 -11.5 -3.53012 | GGAAGCCCGACAGGG CGGAGACGG TTTA CCGGCTCCG TTTACGACAGCGCCG TERM 83 62186 - 62206 + r 95 -13.9 -2.70932 | opp_overlap 62186 GCACTGGCGGAGATA CGCGGCGCC GCA GGCGCGGCG TACTTCGCCGGCAGG TERM 84 62206 - 62186 - R 95 -13.9 -2.87564 | opp_overlap 62186 GCACTGGCGGAGATA CGCGGCGCC GCA GGCGCGGCG TACTTCGCCGGCAGG TERM 85 62212 - 62236 + r 100 -11.3 -4.07687 | overlap 62214 AGGCGCGGCGTACTT CGCCGGCAGGC AGA GCCTGCCAGGG TTTTGCGCGCGGGCT TERM 86 62214 - 62235 + r 93 -12.3 -3.04398 | gap 1, overlap 62212 GCGCGGCGTACTTCG CC-GGCAGGC AGA GCCTGCCAGG GTTTTGCGCGCGGGC YPMT1.61c 62789 - 62283 - | antirestriction protein TERM 87 63160 - 63181 + Gr 84 -11.5 -3.09327 | overlap 63163 TCCTTCGTGGTAGAT TCAGGGGGC CGCC GCCCCCTGC TGTTCGCTACACTGG TERM 88 63163 - 63178 + Gr 83 -11.8 -2.75992 | overlap 63160 TTCGTGGTAGATTCA GGGGGC CGCC GCCCCC TGCTGTTCGCTACAC YPMT1.62c 63967 - 63188 - | hypothetical protein YPMT1.61N 62997 - 63347 + | hypothetical protein TERM 89 63595 - 63579 - GT 72 -10.1 -2.87211 | ACCTGCCGGGATACA TCCCGCA CGG CGCGGGA CAGGCAATCCGTTAC TERM 90 63984 - 64023 + Tr 73 -2.9 -5.1101 | gap 2, opp_overlap 63997, overlap 63989 63995 ATGGGTTCCTCTGAA CGGGGTCAGTACACGCCGC CCGG GCGGCGTGT--TGATTTCA TTTTTTCAGTAATGC TERM 91 63989 - 64018 + Tr 82 -8 -4.43669 | gap 2, opp_overlap 63997, overlap 63984 63995 TTCCTCTGAACGGGG TCAGTACACGCCGC CCGG GCGGCGTGT--TGA TTTCATTTTTTCAGT TERM 92 63995 - 64014 + Tr 100 -15 -3.7256 | opp_overlap 63997, overlap 63989 63984 TGAACGGGGTCAGTA CACGCCGC CCGG GCGGCGTG TTGATTTCATTTTTT TERM 93 64012 - 63997 - TR 83 -11.8 -2.78715 | opp_overlap 63995 63989 63984 AACGGGGTCAGTACA CGCCGC CCGG GCGGCG TGTTGATTTCATTTT YPMT1.63c 64440 - 64021 - | hypothetical protein YPMT1.63Ac 64672 - 64451 - | hypothetical protein TERM 94 64628 - 64648 + g 72 -4 -4.82667 | gap 1, overlap 64621 64629 64644 CATGCTGTTGGCTAC TTCCGC-CA CTTC TGCGCGGAG TTTTTCGTGTCCTGC YPMT1.64c 65349 - 64672 - | putative methylase YPMT1.64N 64969 - 65496 + | hypothetical protein YPMT1.65 65742 - 66050 + | hypothetical protein YPMT1.66c 67609 - 66212 - | putative DNA-binding protein TERM 95 67980 - 67963 - R 91 -7 -5.53079 | opp_overlap 67963 AAAACATACAAAAAA GGATGC TCTTCG GCATCC TTATCCCTTACTCAC TERM 96 67996 - 68023 + r 75 -5.6 -4.73635 | overlap 67998 68000 TTATCCCTTACTCAC CTGATTCTGGAA GTCT TTCCAGAATACG TTTTATTGCCTTATC TERM 97 68000 - 68019 + r 70 -9.4 -2.85242 | overlap 67998 67996 CCCTTACTCACCTGA TTCTGGAA GTCT TTCCAGAA TACGTTTTATTGCCT parB 68959 - 67988 - | partitioning protein B TERM 98 68428 - 68447 + g 70 -2.8 -4.86731 | CCTGAAACGCACGTG TCACTTTC GCCG GAGAGAGA TTTTCTTTCAACGCA parA 70161 - 68956 - | partitioning protein A YPMT1.68A 70463 - 70690 + | hypothetical protein YPMT1.69 70690 - 71016 + | hypothetical protein YPMT1.70 71216 - 71836 + | putative resolvase YPMT1.71 71857 - 72843 + | hypothetical protein TERM 99 72853 - 72872 + T 100 -12.2 -3.92485 | opp_overlap 72853, overlap 72849 CACTAATCATTTAAA CGACTAGC GCTC GCTAGTCG TTCTCTTTCTCATGT TERM 100 72872 - 72853 - T 93 -12.2 -3.72241 | opp_overlap 72853 72849 CACTAATCATTTAAA CGACTAGC GCTC GCTAGTCG TTCTCTTTCTCATGT YPMT1.72c 73141 - 72866 - | hypothetical protein YPMT1.73 73881 - 74369 + | putative phospholipase D YPMT1.74 74447 - 76210 + | toxin protein TERM 101 76281 - 76258 - T 79 -8.2 -4.19123 | opp_overlap 76258 76276 76277, overlap 76276 CATAAATCACATAAA CCATCATGCT AATA ATCATGATGG TTATCATCTCTGTTT TERM 102 76258 - 76281 + T 71 -8.2 -3.52909 | opp_overlap 76258 76276, overlap 76276 76277 CATAAATCACATAAA CCATCATGCT AATA ATCATGATGG TTATCATCTCTGTTT YPMT1.75c 76925 - 76455 - | reverse transcriptase TERM 103 76773 - 76788 + g 70 -8.2 -3.74251 | CACACCATCAACGCC GGGGGT ATGC GCCCCC TTTGATGCAAGTGTG YPMT1.76 76996 - 77304 + | hypothetical protein YPMT1.76A 77219 - 77590 + | hypothetical protein YPMT1.79c 79308 - 78286 - | transposase TERM 104 79803 - 79782 - R 84 -10.1 -3.74693 | TGCCACCGTATTAAA GGTGATCGC TCAG GCGGTCACC GAACTCGATAATAAA YPMT1.80c 80985 - 79777 - | putative transposase YPMT1.81c 82257 - 81334 - | putative F1 operon positive regulatory protein TERM 105 82814 - 82801 - g 83 -3.1 -5.50774 | GAGAATAAAGAAAAA GAATC AGAG GATCC TTTCGTGGTCACTCC caf1M 82567 - 83343 + | putative F1 chaperone protein TERM 106 83699 - 83689 - g 73 -5.4 -4.67982 | overlap 83674 CCTGATTTAATAAAA TCTG GTA CAGA GCAATGTGTTGATTT TERM 107 84658 - 84634 - g 100 -5 -6.32017 | gap 1, opp_overlap 84639 AATAAACAAAAAAAA GAAAGCGGCCA ACGT TGGC-GCGTTC GATATAATAAGTACT caf1A 83368 - 85869 + | putative F1 capsule anchoring protein TERM 108 86350 - 86371 + G 79 -6.6 -4.69214 | overlap 86340 TGGGGGATGACGTCG TCTTGGCT ACGGGC AGCCAGGA TTTCTTTGTTCGCTC YPMT1.84 85950 - 86462 + | F1 capsule antigen TERM 109 86479 - 86508 + T 84 -10.8 -3.58879 | opp_overlap 86480 86484, overlap 86480 86484 CCATATAGATAATAG ATAAAGGAGGGC TATTAT GCCCTCCTTTAA TATTTATGAATTATC TERM 110 86480 - 86507 + T 95 -14.3 -2.74604 | opp_overlap 86480 86484, overlap 86479 86484 CATATAGATAATAGA TAAAGGAGGGC TATTAT GCCCTCCTTTA ATATTTATGAATTAT TERM 111 86507 - 86480 - T 100 -14.3 -3.26387 | opp_overlap 86480 86479 86484, overlap 86484 CATATAGATAATAGA TAAAGGAGGGC TATTAT GCCCTCCTTTA ATATTTATGAATTAT TERM 112 86484 - 86503 + T 90 -10.7 -4.04579 | opp_overlap 86480 86484, overlap 86480 86479 TAGATAATAGATAAA GGAGGGC TATTAT GCCCTCC TTTAATATTTATGAA TERM 113 86503 - 86484 - T 100 -10.7 -4.26393 | opp_overlap 86484 86480 86479, overlap 86480 TAGATAATAGATAAA GGAGGGC TATTAT GCCCTCC TTTAATATTTATGAA TERM 114 87019 - 87031 + T 93 -2.6 -5.99154 | CAAAGCAGCCTTTGC CCTC ACCCC GGGG TTTTTTTATTTGGTA TERM 115 87093 - 87121 + T 89 -11.9 -3.28712 | opp_overlap 87093 CATAGCCGGTAAAAA TGATTCCATACCT ATT AAGTATGGAATCA TTGTACAAAACAGGC TERM 116 87121 - 87093 - T 100 -14.1 -4.59109 | opp_overlap 87093 CATAGCCGGTAAAAA TGATTCCATACCT ATT AAGTATGGAATCA TTGTACAAAACAGGC YPMT1.86c 88706 - 88320 - | hypothetical protein YPMT1.86A 88969 - 89181 + | hypothetical protein TERM 117 89238 - 89204 - f 80 -10.1 -3.6682 | overlap 89205 TCCTACCTATTGAAA CCTGTACGAACAGCT TGGCC ACCTGTTCGTACAGC ATAAAATTACACACA TERM 118 89237 - 89205 - f 93 -13.6 -2.79878 | overlap 89204 CCTACCTATTGAAAC CTGTACGAACAGCT TGGCC ACCTGTTCGTACAG CATAAAATTACACAC TERM 119 89589 - 89621 + G 80 -4.8 -5.06414 | gap 1, opp_overlap 89585, overlap 89587 89585 AGAGAGGAAAGGCTC CGTCTACCGG-GCTT TGGA ACGCGCTGGAAGACG TTTTTATTGAACGCA cobT 89291 - 91657 + | porphyrin biosynthetic protein cobS 91754 - 92989 + | porphyrin biosynthetic protein SEQUENCE gi|16120353|ref|NC_003143.1| Yersinia pestis CO92, complete genome (length 4653728) YPO0001 711 - 271 - | putative flavoprotein asnC 1265 - 804 - | regulatory protein asnA 1435 - 2427 + | asparagine synthetase AsnA TERM 1 2455 - 2483 + T 100 -9.5 -4.84529 | ATCCCCCTATGCTAA CTCGCGATAACGG TAT CAGTCATCGCGGG TTTTTAACTTTATCA yieM 3992 - 2526 - | hypothetical protein TERM 2 3615 - 3627 + g 86 -6.9 -5.02476 | overlap 3616 CGTTTGCAGGCTATC TCCGC CTG GCGGG TTTTTTGCCAGGTCT YPO0005 5549 - 3996 - | regulatory ATPase RavA TERM 3 4922 - 4938 + g 71 -5.1 -4.46212 | overlap 4924 ACTGGTGGAATTCTT CATCAGT GAT ACTGAGG TTTTCTGCTACCGGG TERM 4 4990 - 5000 + g 76 -3.2 -5.18726 | CTGATCAGCAGTGAG CGGA AAT TCTG TTTTTCTTGTACCCG TERM 5 5905 - 5926 + G 73 -3 -4.94902 | ATATTGGCACCAGCC CACTCTAT ACCTTG AGAGAGTG TTTTTCTGGTCATTA TERM 6 7257 - 7224 - g 74 -11.7 -2.72471 | gap 1, opp_overlap 7225 7227, overlap 7223 7227 GCTTCACTAGAGAAG TCACCGCCAGTACGGG TAC CCGGTAC-GGCGGTGT ATATGTCGCGAGCAA TERM 7 7225 - 7256 + G 86 -15.2 -2.98823 | gap 1, opp_overlap 7224 7223 7227, overlap 7227 CTTCACTAGAGAAGT CACCGCCAGTACGGG TAC CCGGTAC-GGCGGTG TATATGTCGCGAGCA TERM 8 7254 - 7227 - g 73 -12 -2.64051 | gap 1, opp_overlap 7225 7227, overlap 7224 7223 TCACTAGAGAAGTCA CCGCCAGTACGGG TAC CCGGTAC-GGCGG TGTATATGTCGCGAG TERM 9 7227 - 7254 + G 77 -12 -3.05022 | gap 1, opp_overlap 7227 7224 7223, overlap 7225 TCACTAGAGAAGTCA CCGCCAGTACGGG TAC CCGGTAC-GGCGG TGTATATGTCGCGAG trkD 5823 - 7691 + | potassium transport protein Kup TERM 10 7724 - 7692 - f 76 -10 -3.29211 | gap 1, opp_overlap 7696, overlap 7687 7680 7696 CAAGTGGAAATTTAA TTG-AGAGGCCGTTA ATCA TAACGGCCTCTTCTA TCATCATTCACACTA TERM 11 7696 - 7719 + F 100 -15.4 -3.57731 | opp_overlap 7696 7692 7687 7680 TGGAAATTTAATTGA GAGGCCGTTA ATCA TAACGGCCTC TTCTATCATCATTCA TERM 12 7719 - 7696 - f 100 -15.4 -2.58812 | opp_overlap 7696, overlap 7692 7687 7680 TGGAAATTTAATTGA GAGGCCGTTA ATCA TAACGGCCTC TTCTATCATCATTCA YPO0007 7896 - 8315 + | D-ribose pyranase rbsK 8366 - 9292 + | ribokinase YPO0009 10936 - 9512 - | putative membrane transport protein TERM 13 9710 - 9696 - G 76 -4.2 -4.92783 | overlap 9697 9703 AACCCATCATAAAAA CGCAAC ACA GTCGCA CTGATAGCAATCCCA YPO0010 11705 - 11016 - | putative GntR-famly transcriptional regulator TERM 14 11591 - 11608 + g 76 -12.7 -2.6544 | overlap 11590 CCAACTCTATTTCGC CGGGCAG TATA CTGCCCG CTTCATATTCTCCTG TERM 15 14108 - 14071 - H 78 -5.7 -4.7629 | opp_overlap 14071 14065 14074, overlap 14074 TTATGAACTGAAAAA TAACGTAAAGATGACTT TACC AAGTCGTGTTTACGATA TTGCTCTTTAACAAT TERM 16 14105 - 14074 - H 78 -7.4 -4.47888 | opp_overlap 14071 14065 14074, overlap 14071 TGAACTGAAAAATAA CGTAAAGATGACTT TACC AAGTCGTGTTTACG ATATTGCTCTTTAAC TERM 17 15564 - 15546 - H 82 -10.3 -3.57798 | overlap 15559 CATAAGTAACGATAA TGCGGGT GAAAA ACCCGCA CGCCGGAAGACCAAG TERM 18 16024 - 15998 - H 70 -9.4 -2.75844 | opp_overlap 16012 16020, overlap 15997 16000 GGCGTTAGGTGAAAG GACTAGCTCCTG GAG CTGAAGCCAGTC GCAGATACCAGCTGG TERM 19 16071 - 16060 - H 74 -4.4 -5.06816 | ACTGTTTAATAAAAA CACA GCAC TGTG CAAACACGAAAGTGG TERM 20 17183 - 17193 + H 74 -6.8 -4.27316 | opp_overlap 17183 GGCTTAACCTTACAA CACC GAA GGTG TTTTGAATTGAGAGA TERM 21 17448 - 17414 - H 95 -9.2 -4.50627 | opp_overlap 17421 CAGGCATCAAATAAA GCCAAGACCCCATGCC CAA AGCGTGGGGTTTTTGC TGTGCGCGAAACACA TERM 22 17421 - 17441 + H 100 -10.4 -4.8048 | opp_overlap 17414 CAAATAAAGCCAAGA CCCCATGC CCAAA GCGTGGGG TTTTTGCTGTGCGCG TERM 23 19088 - 19109 + G 77 -10.1 -3.74693 | TTTATTATCGAGTTC GGTGACCGC CTGA GCGATCACC TTTAATACGGTGGCA YPO0011 17906 - 19114 + | transposase for the IS285 insertion element mobB 19702 - 19172 - | molybdopterin-guanine dinucleotide biosynthesis protein B TERM 24 19489 - 19503 + g 78 -10 -3.87815 | opp_overlap 19491 GTGCCCAACGGCAAT CACTGG CGA CCAGTG TTTGTAGCGCTCCAG TERM 25 19685 - 19665 - G 88 -14.1 -3.44051 | opp_overlap 19663 CCTGTACCACTATAA GCCGCTATT CCT AATAGCGGC GGTGACTTGTAGTTC mobA 20343 - 19702 - | molybdopterin-guanine dinucleotide biosynthesis protein A YPO0013a 20443 - 20712 + | hypothetical protein YPO0014 20792 - 21778 + | serine/threonine protein kinase dsbA 21806 - 22429 + | periplasmic protein disulfide isomerase I TERM 26 22446 - 22462 + F 100 -6.5 -6.32017 | opp_overlap 22445 22446 TTAGTACATAAAGAG GGGGC TTTTGTT GCCCC TTTTTTTTATTTATT TERM 27 23068 - 23101 + G 100 -10.5 -4.72272 | gap 1 ATGCTACGCAGTCTG CTGCTGCAATATCGAC CAA GTC-ATGTTGCAGTAG TTTTTGATGCAAAAG TERM 28 24255 - 24238 - g 83 -9.9 -4.19817 | opp_overlap 24250 GGTATCGATCTAAAA GGTATCG CTTT CGATACC ATGCTGGAGTCTTAT polA 22921 - 25719 + | DNA polymerase I TERM 29 25980 - 25950 - f 76 -11.1 -2.62184 | opp_overlap 25952 TTTGGCTGTATATTA GCCGCCCCAGTCA TTTAT TGACTGGGGCGTT TTTTGTGCCCAGAAA TERM 30 25952 - 25978 + F 100 -18.1 -5.24129 | opp_overlap 25950 TGGCTGTATATTAGC CGCCCCAGTCA TTTAT TGACTGGGGCG TTTTTTGTGCCCAGA TERM 31 26015 - 25997 - f 100 -16 -4.36914 | opp_overlap 25997 TTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC TERM 32 25997 - 26015 + F 100 -16 -3.07307 | opp_overlap 25997 TTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC tnp 26128 - 26586 + | transposase for the IS1541 insertion element TERM 33 26660 - 26692 + T 100 -11.3 -3.92143 | opp_overlap 26667, overlap 26664 26666 26667 CCTTATAGGCGCATA TGAAAAACCTCCGGC TAT GCCGGAGGATATTTA TTTATGGGGATTTTG TERM 34 26664 - 26688 + T 100 -9.9 -4.55697 | opp_overlap 26667, overlap 26660 26666 26667 ATAGGCGCATATGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTTATGGGGAT TERM 35 26666 - 26686 + T 100 -12.5 -3.88703 | opp_overlap 26667, overlap 26664 26660 26667 AGGCGCATATGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTTATGGGG TERM 36 26667 - 26685 + T 100 -16 -2.92499 | opp_overlap 26667, overlap 26666 26664 26660 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTATGGG TERM 37 26685 - 26667 - T 100 -16 -4.8048 | opp_overlap 26666 26664 26660 26667 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTATGGG YPO0019 27488 - 26838 - | GTPase EngB TERM 38 28034 - 28086 + H 100 -13.6 -3.99405 | gap 1, opp_overlap 28024 28049, overlap 28049 GGATATCCTTCCGCA GAAG-GTGCGAAAAAAGGCGACAGG TTAA CCTGCCGCCTTTTTTCTTTCTCTTC TTTCTGCTAGATTCC TERM 39 28049 - 28070 + H 100 -11.5 -5.7827 | opp_overlap 28049, overlap 28034 GAAGGTGCGAAAAAA GGCGACAGG TTAA CCTGCCGCC TTTTTTCTTTCTCTT TERM 40 28070 - 28049 - H 100 -13.7 -5.03145 | opp_overlap 28049 28034 GAAGGTGCGAAAAAA GGCGACAGG TTAA CCTGCCGCC TTTTTTCTTTCTCTT YPO0020 28233 - 28799 + | hypothetical protein TERM 41 29778 - 29752 - g 70 -8.6 -3.70102 | opp_overlap 29751 ACGTAAAATCAAAGA CGCTGATCTGCC AAC GGCGGAGCAACG GTTGGATATTTTGCA hemN 28982 - 30355 + | coproporphyrinogen III oxidase TERM 42 30394 - 30361 - T 83 -11.8 -2.80994 | gap 1, opp_overlap 30365 30372 TGTAATCTGACGATA TCACCCTC-AGTGCG GTTAT CGCTCTTGAGGGTGA CCATCTGGCGGGAAC glnG 31821 - 30409 - | nitrogen regulation protein NR(I) TERM 43 30791 - 30802 + g 76 -4.4 -4.98531 | overlap 30798 AGCGCCGCTTCGGTC TCTG GATG CAGA TTTTTGCTTTCCACG glnL 32878 - 31829 - | nitrogen regulation protein NR(II) TERM 44 33030 - 33013 - R 100 -11.3 -5.28826 | AAAGTGGAGAAAAAA GCCCATC CTAA GATGGGC CAAAAGTTTCCACGG glnA 34540 - 33131 - | glutamine synthetase TERM 45 33753 - 33763 + g 71 -6.8 -4.13945 | CCTGAGCCGTTATCG CCGA ACA TCGG TTTTGGCATAAAGGT YPO0025 34884 - 34726 - | possible membrane protein bipA 35102 - 36925 + | putative GTPase TERM 46 36947 - 36971 + F 100 -14.3 -3.75738 | TTTGCATTGTTGATA CTTAGGGCGCT CAA GGCGCCCTGAG TTCTTACTCCTCCTA YPO0027 37247 - 37837 + | phosphatase rbn 37934 - 38818 + | ribonuclease BN YPO0029 38825 - 39262 + | D-tyrosyl-tRNA deacylase YPO0030 40118 - 39336 - | transposase/IS protein TERM 47 40034 - 40048 + g 77 -11.4 -3.3506 | overlap 40047 CTGCCTGTTGTGACA GCGCAG GCG CTGCGC TTATAAGGCTTTCCA y1093 41137 - 40115 - | transposase for insertion sequence IS100 TERM 48 41159 - 41141 - H 100 -13.2 -4.01078 | AAAAGTGACCATAAA CTCTCCTG AAT CAGGAGAG CAGATTACCCCCTGG YPO0032 41407 - 42330 + | hypothetical protein TERM 49 42369 - 42350 - T 79 -8.6 -4.11216 | opp_overlap 42350 CTGGTACCCTTAAAA TCACTGAC ATGA GCCAGTGA TTTGCTGCCGGGCGA YPO0033 44174 - 42465 - | possible exported protein TERM 50 44296 - 44271 - R 100 -6.9 -5.9873 | gap 1, opp_overlap 44271 GGACCATAAAAAAAA TGGCCGG-CATC ATT AATGACCGACCA TTTCAGTGATGTGTT YPO0034 45707 - 44322 - | putative membrane permease TERM 51 44777 - 44789 + g 75 -9.1 -3.88498 | opp_overlap 44776 CATTGGCCAGTACAC CGCCT TTT AGGCG TTTCATATATAACGG TERM 52 45330 - 45351 + g 73 -2.9 -5.00616 | CAGCGCCGCCATCAT CGTTGGG ATATCTGC CCCACCG TTTTTTAGCGCCAGC gltC 45945 - 47159 + | sodium/glutamate symport carrier protein TERM 53 47263 - 47248 - T 78 -9 -3.81146 | GCTGGGAATTAAGAA GCCTCA TGAA TGAGGC TGAGGTTATTGACAA TERM 54 47341 - 47367 + T 73 -10.1 -2.97771 | gap 1, opp_overlap 47330, overlap 47336 47342 ACATCCATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCTTCTGCC TERM 55 47342 - 47368 + T 86 -10.1 -3.9749 | gap 1, opp_overlap 47330, overlap 47336 47341 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCTTCTGCCT recG 49606 - 47525 - | ATP-dependent DNA helicase RecG TERM 56 47780 - 47793 + g 71 -5.2 -4.45544 | ACGTAATACCTGCAA CCGC ATTTGA GCGG TTTTACTTAATGGCG trmH 50299 - 49607 - | tRNA guanosine-2'-O-methyltransferase TERM 57 49918 - 49932 + g 80 -4.2 -5.14563 | CCAGTGCCAGCGCTT CTGGTG AAA TACCGG TTTTTTCCTGACCCA spoT 52413 - 50305 - | bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase TERM 58 51213 - 51191 - G 76 -7.6 -4.28977 | opp_overlap 51191, overlap 51192 ACAACATAGGCAAAA TCGACCGGTG TGG CACCAGCCGG TAATTCCACAATGCG TERM 59 51212 - 51192 - G 74 -11.1 -3.16302 | opp_overlap 51191, overlap 51191 CAACATAGGCAAAAT CGACCGGTG TGG CACCAGCCG GTAATTCCACAATGC TERM 60 51857 - 51875 + g 70 -4.5 -4.68593 | opp_overlap 51857 TAGAGTGCTTCAAAA CCCAGCT CTTCC AGCTCGG TTTTTAAATGATGAA rpoZ 52708 - 52433 - | DNA-directed RNA polymerase subunit omega gmk 53386 - 52763 - | guanylate kinase TERM 61 53331 - 53319 - G 79 -9.1 -4.15044 | opp_overlap 53315 53319 TGTGTTTTTAACAAA GCCTG AAT CAGGC TTGATTTCCCTGCCC TERM 62 53319 - 53331 + g 70 -9.1 -3.54408 | opp_overlap 53319, overlap 53315 TGTGTTTTTAACAAA GCCTG AAT CAGGC TTGATTTCCCTGCCC TERM 63 54153 - 54130 - g 71 -7.4 -4.02206 | gap 1 AACTCAAAGATGAAA CCGCCCT-CAC AAG GTGGATGGCGG GGCGGAAAAATCTCT TERM 64 55040 - 55052 + G 70 -3.3 -4.8543 | ACGCTTACCACATGG CTGTG AAC CTCAG TTTTTATCCCGCTTG ligB 53787 - 55490 + | NAD-dependent DNA ligase LigB YPO0042 56126 - 55503 - | hypothetical protein TERM 65 56054 - 56033 - G 71 -7.3 -4.10566 | AGGCAATAATAATAA CGCCAAACA TATC CATTTGGCG GCGACCCGCAGCCAG TERM 66 56465 - 56496 + r 100 -15.9 -5.5208 | opp_overlap 56468 56472 GGCTTTTCCTGCGAA CCAGCAAGCCCGC AGATTA GCGAGCTTGCTGG TTTTTTGTGTTCTGG TERM 67 56493 - 56468 - R 88 -12.6 -2.70932 | opp_overlap 56465, overlap 56472 TTTTCCTGCGAACCA GCAAGCCCGC AGATTA GCGAGCTTGC TGGTTTTTTGTGTTC YPO0043 57392 - 56529 - | hypothetical protein rph 57519 - 58235 + | ribonuclease PH TERM 68 58244 - 58260 + F 100 -9.4 -5.41143 | opp_overlap 58241 ATCATAAATTTATTA GGCGAC GGATA GTCGCC TTTTTTTACCCGCTA pyrE 58402 - 59049 + | orotate phosphoribosyltransferase TERM 69 59076 - 59133 + T 100 -21.6 -3.68569 | gap 1, opp_overlap 59067 59086, overlap 59077 59078 59098 ATAACATGGGGTAAT C-CCGAATCAAGCTACGCCAAGAGGGC CGTTT GCCCTTTTTGCGTAGCTTGATTCGCTG TTCTCTCTATGTCTT TERM 70 59077 - 59131 + T 100 -25.3 -3.40967 | opp_overlap 59067 59086, overlap 59076 59078 59098 TAACATGGGGTAATC CCGAATCAAGCTACGCCAAGAGGGC CGTTT GCCCTTTTTGCGTAGCTTGATTCGC TGTTCTCTCTATGTC TERM 71 59078 - 59130 + T 100 -28.8 -2.63857 | opp_overlap 59067 59086, overlap 59077 59076 59098 AACATGGGGTAATCC CGAATCAAGCTACGCCAAGAGGGC CGTTT GCCCTTTTTGCGTAGCTTGATTCG CTGTTCTCTCTATGT TERM 72 59122 - 59086 - T 100 -15.2 -3.35867 | opp_overlap 59078 59077 59076 59098 GTAATCCCGAATCAA GCTACGCCAAGAGGGC CGTTT GCCCTTTTTGCGTAGC TTGATTCGCTGTTCT TERM 73 59098 - 59110 + T 77 -6.2 -4.68424 | opp_overlap 59086, overlap 59078 59077 59076 CAAGCTACGCCAAGA GGGC CGTTT GCCC TTTTTGCGTAGCTTG slmA 59780 - 59184 - | nucleoid occlusion protein TERM 74 59314 - 59349 + g 72 -4 -4.82901 | opp_overlap 59313, overlap 59314 59313 TGGGTGGCCAGTAAC GCTTCATCATGGATAA AGCC TTGTCCATCACGCAGC TTTTTCTCACGAAGG TERM 75 59517 - 59534 + g 76 -4.8 -4.90906 | CAGCAGGATTAAGCG GAGGCG ATTAAA CGTCTC TTTTTCATCTTGTAG TERM 76 59833 - 59860 + r 91 -12 -3.56562 | gap 1, opp_overlap 59828 AAAACCCAAACACCG GCCGCTCTGGGAA CAA TGCCCAG-GCGGC TTATGTGATAGCTTT dut 60357 - 59902 - | deoxyuridine 5'-triphosphate nucleotidohydrolase dfp 61552 - 60338 - | bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase TERM 77 61383 - 61372 - G 71 -7.2 -4.04209 | GCAAATCATCAGAAA CGGG ATAG CCCG AGACTGCCTGTAGCG radC 61749 - 62417 + | DNA repair protein RadC rpmB 62680 - 62916 + | 50S ribosomal protein L28 rpmG 62928 - 63095 + | 50S ribosomal protein L33 TERM 78 63102 - 63081 - f 83 -8.9 -4.07877 | GTACTCTATAAAGAA GCTAAAATT AAGT AATTTTAGC GGACTAAGAAAAACC TERM 79 63137 - 63110 - f 95 -12.8 -3.16683 | opp_overlap 63116, overlap 63116 ATTTTAGCGGACTAA GAAAAACCCGGC CTTG GCCGGGTTTTTT ATTATATAAAGTACA TERM 80 63116 - 63131 + F 100 -11.8 -5.60689 | opp_overlap 63110 63116 GCGGACTAAGAAAAA CCCGGC CTTG GCCGGG TTTTTTATTATATAA TERM 81 63131 - 63116 - f 100 -11.8 -5.1356 | opp_overlap 63116, overlap 63110 GCGGACTAAGAAAAA CCCGGC CTTG GCCGGG TTTTTTATTATATAA mutM 63178 - 63987 + | formamidopyrimidine-DNA glycosylase coaD 64472 - 63993 - | phosphopantetheine adenylyltransferase kdtX 65251 - 64469 - | lipopolysaccharide core biosynthesis glycosyl transferase kdtA 66529 - 65252 - | 3-deoxy-D-manno-octulosonic-acid transferase rfaC 67914 - 66949 - | ADP-heptose:LPS heptosyl transferase I rfaF 68978 - 67914 - | ADP-heptose:LPS heptosyltransferase II rfaD 69941 - 69009 - | ADP-L-glycero-D-mannoheptose-6-epimerase kbl 70187 - 71398 + | 2-amino-3-ketobutyrate coenzyme A ligase tdh 71408 - 72433 + | L-threonine 3-dehydrogenase TERM 82 72446 - 72486 + T 86 -11.3 -3.3506 | opp_overlap 72484, overlap 72439 TAGTTTATCCCCTTC GGGCTTGGTGTTGCA AAACTACCCGC TGCGATACCAAGCCC TTGTCAGGATTTACG YPO0063 74881 - 73529 - | hypothetical protein TERM 83 73790 - 73768 - G 71 -6.2 -4.28548 | opp_overlap 73772 73779, overlap 73771 AGTCAGCCAGTAAAA CACGGCCATC GGC GATGGCTTTG ACTTCGCTGCCTTCA TERM 84 73772 - 73786 + g 77 -10 -3.76952 | opp_overlap 73771 73768, overlap 73779 AGCCAGTAAAACACG GCCATC GGC GATGGC TTTGACTTCGCTGCC TERM 85 74609 - 74623 + g 95 -2.1 -6.13503 | TTTTAGTTGATCCAG CAATG AACTG CGTTG TTTTTTTTGTTGCTG TERM 86 74852 - 74810 - G 77 -12.1 -3.11634 | opp_overlap 74839, overlap 74814 CGGTAGACGACTCAA CTTATCTGACAGCAGAGAG GGAGA CTCTCTACCGTCAGAGACG GCATCTTTCGTAGTT TERM 87 74848 - 74814 - G 86 -15.9 -2.55722 | opp_overlap 74839, overlap 74810 AGACGACTCAACTTA TCTGACAGCAGAGAG GGAGA CTCTCTACCGTCAGA GACGGCATCTTTCGT YPO0064 76456 - 74909 - | phosphoglyceromutase TERM 88 75073 - 75102 + g 70 -8.6 -3.74747 | gap 1 GGCTGGTATGGGCGG TGTGTG-CCTGGC CAGTT GCCGGGTCACGCA TTTGCTCAGCGTTGC TERM 89 76035 - 76023 - G 70 -9.1 -3.6269 | opp_overlap 76023 76022, overlap 76021 GCATGCAGATAAATA GCGGT TGC ACCGC GTTTAGCCGCCAGCT YPO0065 76853 - 77287 + | hypothetical protein grxC 77406 - 77654 + | glutaredoxin 3 TERM 90 77629 - 77649 + F 82 -10.4 -3.68827 | ACGCCCTGGATGCGC GCGGTGGG CTAGA CCCACTGC TTTAACTCGTCAGTG secB 77742 - 78218 + | preprotein translocase subunit SecB TERM 91 78831 - 78843 + G 74 -7.7 -4.26076 | overlap 78811 78807 TCGGTGCAGGTATGT CCGAT GGC ATCGG TTTTGGTGCGAATGC gpsA 78218 - 79237 + | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase YPO0069 79297 - 79437 + | hypothetical protein cysE 79503 - 80324 + | serine acetyltransferase YPO0071 80935 - 80447 - | putative methyltransferase TERM 92 81442 - 81452 + G 80 -2.4 -5.50723 | TTGGCAGCTCAACTG GGGC TTA GCAC TTTTTATTTTCATCG YPO0072 81124 - 82188 + | bifunctional regulatory protein/DNA repair protein cpxA 83613 - 82237 - | two-component sensor protein TERM 93 82376 - 82389 + g 70 -9.5 -3.32498 | CCTGTTCCTCCCGAC GCCCG ATCT CGGGC TTCATCTGTACGATA TERM 94 82599 - 82588 - G 76 -7.2 -4.35644 | overlap 82589 82590 AGGATTACAAAATAA GGGC CATG GCCC CGGAGGTGCCGTGAC cpxR 84308 - 83610 - | DNA-binding transcriptional regulator CpxR TERM 95 84626 - 84611 - g 76 -6.8 -4.49316 | ATGATGAACAAGAAA GGCGAC CGCG GTCACC ATAACATGTTTGATG TERM 96 84983 - 84938 - g 70 -3.3 -4.75404 | overlap 84950 84972 AAATTGCAGCAAAAA CCAGCAGCACAACCTTCTTCT GCCC AGAAGTAAGTAGTAGTACTAG TAACACCCTGTTTTC cpxP 84482 - 84970 + | periplasmic stress adaptor protein CpxP TERM 97 85027 - 85045 + F 100 -14.6 -5.71638 | CCATCCCTGTCTTTC GCCCTCCA TGA TGGAGGGC TTTTTTTGCTTATTG YPO0076 85648 - 86607 + | hypothetical protein TERM 98 86892 - 86870 - f 74 -7 -4.2535 | AGACCATAGTGAAAA CGGCGGAATA CGG TATTCCACAG ACCAGAAATTCTCTG fieF 87169 - 88071 + | ferrous iron efflux protein F pfkA 88289 - 89272 + | 6-phosphofructokinase TERM 99 89297 - 89349 + F 100 -9.5 -5.00138 | gap 3, opp_overlap 89297 TCGCTCATTCATCAA GCCCTCGAAAT-TGAACTGATCCCAA AAAG TTGGG--CAGTTTACATTACGAGGGC TTTTTACTTTCGGTC sbp1 89493 - 90482 + | sulfate transporter subunit TERM 100 90610 - 90647 + T 77 -8.5 -3.91897 | gap 1, opp_overlap 90618 TACCAACCGCTTTAT CG-CCAACACCACATCGT TGT ATGTTGTGGTGTTGAACG TTTATCGCTACCGCG YPO0080 91550 - 90732 - | hypothetical protein TERM 101 91580 - 91546 - G 73 -12.3 -2.63623 | gap 1, opp_overlap 91576, overlap 91545 91543 91541 TGCGCCAAAAGACAG GCCACCGAAAAC-AGG ATGA CCTTGTCTTCAGTGGC TAAGCGACGTTTAAA YPO0081 93053 - 91626 - | putative membrane transport protein YPO0082 93832 - 93119 - | hypothetical protein TERM 102 93552 - 93542 - G 91 -6.8 -5.15634 | CAGGTCACCAAAAAA GCCA TCA TGGC ATTCGGAGGTCGGCG YPO0083 94761 - 93829 - | hypothetical protein YPO0084 94892 - 95938 + | possible transcriptional regulator TERM 103 96111 - 96132 + T 85 -5.8 -5.1523 | opp_overlap 96105 96111, overlap 96105 96103 TTGGATATATAAAAA CCGGCG CTTTTATTTA CGCCGG TTTTTGTGTTGTACC TERM 104 96132 - 96111 - T 84 -6.5 -5.03994 | opp_overlap 96111 96105 96103, overlap 96105 TTGGATATATAAAAA CCGGCGC TTTTATTT ACGCCGG TTTTTGTGTTGTACC tpiA 96937 - 96170 - | triosephosphate isomerase TERM 105 96995 - 96981 - R 73 -10 -3.03309 | opp_overlap 96981, overlap 96978 GGTCAATAATAATGA CTGCCT GAC AGGCAG TTTACCTGTCCAACA TERM 106 96981 - 96995 + r 80 -10 -3.70902 | opp_overlap 96978 96981 GGTCAATAATAATGA CTGCCT GAC AGGCAG TTTACCTGTCCAACA YPO0086 97701 - 97066 - | hypothetical protein YPO0087 97849 - 98283 + | hypothetical protein fpr 99370 - 98624 - | ferredoxin-NADP reductase TERM 107 99501 - 99472 - R 70 -7.8 -3.68619 | TCTAACTGATGTAAA CTTTACGGCGCT TTTACG AGCGCCGTGCAG AATAAAAATGATTGC TERM 108 99787 - 99801 + r 78 -9.2 -3.70446 | overlap 99788 CGTAATAACTCTTGT TCGCCG ATG CGGCGG TTATCTTCACTGTCG TERM 109 99788 - 99800 + r 75 -10.5 -2.81786 | overlap 99787 GTAATAACTCTTGTT CGCCG ATG CGGCG GTTATCTTCACTGTC TERM 110 100539 - 100549 + r 78 -5.4 -5.0538 | GCAGGAAGCAACCCG TACC GTA GGTA TTTTTTGCCATGCCC glpF 102380 - 101532 - | glycerol uptake facilitator protein YPO0092 102629 - 102390 - | hypothetical protein YPO0093 103008 - 103247 + | hypothetical protein TERM 111 103381 - 103349 - T 100 -11.3 -4.44046 | opp_overlap 103356, overlap 103353 103355 103356 GTCAGCGGAAATAAA TAAATATCCTCCGGC ATA GCCGGAGGTTTTTCA TATGCGCCTATAAGG TERM 112 103377 - 103353 - T 100 -9.9 -4.78326 | opp_overlap 103356, overlap 103349 103355 103356 GCGGAAATAAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCATATGCGCCTAT TERM 113 103375 - 103355 - T 100 -12.5 -3.99693 | opp_overlap 103356, overlap 103353 103349 103356 GGAAATAAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 114 103374 - 103356 - T 100 -16 -2.98189 | opp_overlap 103356, overlap 103355 103353 103349 GAAATAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 115 103356 - 103374 + T 100 -16 -4.8048 | opp_overlap 103356 103355 103353 103349 GAAATAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC tnp 103913 - 103455 - | transposase for the IS1541 insertion element TERM 116 104044 - 104026 - R 100 -16 -3.07307 | opp_overlap 104026 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAG TERM 117 104026 - 104044 + r 100 -16 -4.36914 | opp_overlap 104026 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAG TERM 118 104088 - 104059 - R 100 -13.7 -3.28712 | opp_overlap 104064, overlap 104064 GTTTTCTGGGCACAA GTAAAGGGCGATA TCAG TATCGCCCTTTTC TGTGGGTGCGCCGAT TERM 119 104083 - 104064 - R 100 -12.2 -3.9941 | opp_overlap 104064, overlap 104059 CTGGGCACAAGTAAA GGGCGATA TCAG TATCGCCC TTTTCTGTGGGTGCG TERM 120 104064 - 104083 + r 100 -12.2 -4.55287 | opp_overlap 104064 104059 CTGGGCACAAGTAAA GGGCGATA TCAG TATCGCCC TTTTCTGTGGGTGCG YPO0096 106427 - 105645 - | transposase/IS protein TERM 121 106343 - 106357 + g 77 -11.4 -3.3506 | overlap 106356 CTGCCTGTTGTGACA GCGCAG GCG CTGCGC TTATAAGGCTTTCCA y1093 107446 - 106424 - | transposase for insertion sequence IS100 TERM 122 107468 - 107450 - R 100 -13.2 -4.01078 | AAAAGTGACCATAAA CTCTCCTG AAT CAGGAGAG CAGATTACCCCCTGG YPO0099 109593 - 108358 - | hypothetical protein YPO0100 109863 - 110102 + | hypothetical protein TERM 123 110111 - 110136 + F 100 -14.1 -3.33815 | opp_overlap 110111 GCAGTAATAAGTAAA TATGCCAGCGT GAAA GCGCTGGCATA TTAATTGAAAGGGAT TERM 124 110136 - 110111 - f 100 -13.4 -4.09805 | opp_overlap 110111 GCAGTAATAAGTAAA TATGCCAGCG TGAAAG CGCTGGCATA TTAATTGAAAGGGAT YPO0101 110277 - 110426 + | hypothetical protein YPO0102 110732 - 111316 + | hypothetical protein menG 111918 - 111433 - | ribonuclease activity regulator protein RraA menA 112977 - 112060 - | 1,4-dihydroxy-2-naphthoate octaprenyltransferase TERM 125 112935 - 112958 + g 83 -13.2 -3.27029 | overlap 112929 112934 112933 GTGGTCGTAGGCTTT CCAGCCAAGC CTGG GTTTGGCTGG TGTTGATTGATAGGC TERM 126 113106 - 113084 - R 70 -2.8 -5.06451 | TATCATGTCAAAAAA TTATGACGTT ATC AAAATCATAA TGCGATAAGAATCAT TERM 127 113165 - 113135 - R 100 -15.4 -4.9934 | overlap 113138 ATAATACGATAAAAA CAAGAGTGGGAGGC GAT GCCTCCCACTCGGG ATACTCCATACTGGA TERM 128 113162 - 113138 - R 100 -20.1 -4.57057 | overlap 113135 ATACGATAAAAACAA GAGTGGGAGGC GAT GCCTCCCACTC GGGATACTCCATACT hslU 114544 - 113213 - | ATP-dependent protease ATP-binding subunit hslV 115139 - 114615 - | ATP-dependent protease peptidase subunit ftsN 116084 - 115239 - | cell division protein FtsN cytR 117178 - 116150 - | DNA-binding transcriptional regulator CytR TERM 129 117447 - 117400 - R 78 -5.6 -4.85918 | GATCAGACAATAAAA GATCGGGCGAACCCCTTT TTCTTGACGCTG CAAGGGGTTCGCCATATC CCCTCACCTGAATCA priA 119729 - 117531 - | primosome assembly protein PriA TERM 130 119871 - 119904 + H 90 -11.2 -3.94409 | opp_overlap 119877, overlap 119874 GATATCAAATCCTGT TAACCATCGTTGCT TATTTT ATCAACGATGGTTA TTTATCAATCGTGTG TERM 131 119874 - 119901 + H 79 -8.5 -4.09519 | opp_overlap 119877, overlap 119871 ATCAAATCCTGTTAA CCATCGTTGCT TATTTT ATCAACGATGG TTATTTATCAATCGT rpmE 119972 - 120187 + | 50S ribosomal protein L31 TERM 132 120209 - 120223 + T 100 -12.8 -5.45652 | opp_overlap 120209 CCCGTCAGATAAAAA GGCGCC TTG GGCGCC TTTTTTGTTGCCACT TERM 133 120223 - 120209 - T 100 -12.8 -4.96848 | opp_overlap 120209 CCCGTCAGATAAAAA GGCGCC TTG GGCGCC TTTTTTGTTGCCACT TERM 134 120603 - 120575 - T 100 -7.5 -5.63517 | opp_overlap 120575 TGCGTAAAGAAAAAA TGGCTAAGCACAA TTG TTATGCTGAACCA TTTTTTGTAGTGAAA TERM 135 120575 - 120603 + T 79 -3.1 -5.31275 | opp_overlap 120575 TGCGTAAAGAAAAAA TGGCTAAGCACAA TTG TTATGCTGAACCA TTTTTTGTAGTGAAA TERM 136 120691 - 120656 - T 74 -4.8 -4.74801 | overlap 120639 120638 120658 120662 120675 TAACTGCAGTAAAAA TATTAACTGCAGTGAA AAGG TTAACTGCAGTGAAAA GGTTAACTGCAGTGA TERM 137 120689 - 120658 - T 72 -7.4 -3.98658 | overlap 120639 120638 120656 120662 120675 ACTGCAGTAAAAATA TTAACTGCAGTGAA AAGG TTAACTGCAGTGAA AAGGTTAACTGCAGT TERM 138 120685 - 120662 - T 73 -8.2 -3.62531 | overlap 120639 120638 120658 120656 120675 CAGTAAAAATATTAA CTGCAGTGAA AAGG TTAACTGCAG TGAAAAGGTTAACTG YPO0112 121203 - 120748 - | hypothetical protein YPO0113 121254 - 121415 + | hypothetical protein metJ 121869 - 121552 - | transcriptional repressor protein MetJ TERM 139 124944 - 124962 + G 84 -10.3 -4.08767 | TTACGATGGTTTGGA TGCCAGC CGGAC GCTGGCA TTTTACAACGATGAA metL 123409 - 125844 + | bifunctional aspartate kinase II/homoserine dehydrogenase II metF 126077 - 126961 + | 5,10-methylenetetrahydrofolate reductase TERM 140 127158 - 127176 + T 77 -11 -2.73735 | overlap 127151 127168 127170 TGCTTTTCTACCTGA GTCCGGTA TTC TGCCGGAC TCATTCCGCCTGTTT YPO0118 127924 - 127139 - | transposase for insertion sequence IS1661 YPO0119 128493 - 127978 - | insertion element DNA-binding protein TERM 141 128493 - 128549 + r 78 -10.3 -3.30159 | gap 1, opp_overlap 128498 128503 128524, overlap 128494 128504 AAAAAGGGTGTTTCA TTGAACCGAACCTCCAGATCATGGAT AAAAAG ATCCAAGATCTGG-GGTTCAGTGCAC TTATGGCCCCCTTGG TERM 142 128494 - 128548 + r 95 -13.8 -2.57881 | gap 1, opp_overlap 128498 128503 128524, overlap 128493 128504 AAAAGGGTGTTTCAT TGAACCGAACCTCCAGATCATGGAT AAAAAG ATCCAAGATCTGG-GGTTCAGTGCA CTTATGGCCCCCTTG TERM 143 128544 - 128498 - R 100 -15.4 -3.05384 | gap 1, opp_overlap 128494 128493 128504, overlap 128503 128524 GGGTGTTTCATTGAA CCGAACCTCCAGATCATGGAT AAAAAG ATCCAAGATCTGG-GGTTCAG TGCACTTATGGCCCC TERM 144 128539 - 128503 - R 77 -10.3 -3.19192 | gap 1, opp_overlap 128494 128493 128504, overlap 128498 128524 TTTCATTGAACCGAA CCTCCAGATCATGGAT AAAAAG ATCCAAGATCTGG-GG TTCAGTGCACTTATG TERM 145 128504 - 128539 + r 93 -12.7 -3.08471 | opp_overlap 128503 128498 128524, overlap 128494 128493 TTCATTGAACCGAAC CTCCAGATCATGGAT AAAAAG ATCCAAGATCTGGGG TTCAGTGCACTTATG TERM 146 128534 - 128524 - R 75 -5.4 -4.88736 | opp_overlap 128504 128494 128493, overlap 128503 128498 GATCATGGATAAAAA GATC CAA GATC TGGGGTTCAGTGCAC glpR 129444 - 128686 - | DNA-binding transcriptional repressor GlpR TERM 147 129199 - 129211 + g 76 -6.2 -4.63218 | overlap 129198 GCTAGCAACGCGTTG GGCG ATCCG CGCC TTTTCTTCCGACCAC glpG 130315 - 129479 - | intramembrane serine protease GlpG glpE 130662 - 130333 - | thiosulfate sulfurtransferase malT 133748 - 131037 - | transcriptional regulator MalT TERM 148 131304 - 131294 - G 78 -4 -5.14163 | overlap 131284 ATTTATCAACAAAAA TTTC GTC GAAA TGCGCGAATTTATGC TERM 149 131401 - 131419 + g 70 -11 -2.55074 | TTGAGTTGGATCAGT TGGCGCAG TTG TTGCGCCA TGGCTTCACCTTCAA malQ 136483 - 138579 + | 4-alpha-glucanotransferase YPO0127 139483 - 138908 - | putative DNA uptake protein YPO0128 140244 - 139543 - | gluconate periplasmic binding protein TERM 150 139715 - 139753 + g 78 -13.1 -2.90763 | gap 1, overlap 139720 CGCACGTTCTTTCGC CGCTGTGCCGCCGTCAGC TGCT GTTG-CGGCGGCGTTGCG TGTATACGCTGTAGC TERM 151 139720 - 139748 + g 74 -11 -3.16177 | gap 1, overlap 139715 GTTCTTTCGCCGCTG TGCCGCCGTCAGC TGCT GTTG-CGGCGGCG TTGCGTGTATACGCT bioH 140331 - 141107 + | putative biotin biosynthesis protein YPO0130 141277 - 141546 + | hypothetical protein TERM 152 141684 - 141661 - T 76 -11 -2.50966 | opp_overlap 141662, overlap 141652 141660 141658 141656 ACGGAATCAACATAT TGAGATGCCC ATAT GGGCATCTCT TATTGGTGTGCGTGA TERM 153 141662 - 141683 + T 100 -14.5 -3.78034 | opp_overlap 141652 141661 141660 141658 141656 CGGAATCAACATATT GAGATGCCC ATAT GGGCATCTC TTATTGGTGTGCGTG YPO0131 141941 - 141684 - | hypothetical protein TERM 154 141995 - 141981 - R 74 -10 -3.15579 | opp_overlap 141980 CTAATGGGTGATCAA TGGCAG TTG CTGCCA CTACTTCGGCAGCAA feoB 144292 - 141977 - | ferrous iron transport protein B TERM 155 143860 - 143872 + g 80 -4.7 -5.11613 | opp_overlap 143860 ATACCAATGGAATGA CCGGG CAA CCCAG TTTTTTAGATAATGT feoA 144611 - 144384 - | ferrous iron transport protein A TERM 156 145115 - 145060 - R 100 -29.6 -2.90813 | opp_overlap 145065 145102, overlap 145065 TATTTTGTTAAATTA TTAAACTGCCCTCCTCATTATTGGAT ATCA ATCTAATAATGAGGAGGGCAGTTTAA TGGCCGTCCTTGTCA TERM 157 145110 - 145065 - R 100 -25.1 -3.8901 | opp_overlap 145065 145102, overlap 145060 TGTTAAATTATTAAA CTGCCCTCCTCATTATTGGAT ATCA ATCTAATAATGAGGAGGGCAG TTTAATGGCCGTCCT TERM 158 145065 - 145110 + r 100 -27.3 -3.73953 | opp_overlap 145065 145060, overlap 145102 TGTTAAATTATTAAA CTGCCCTCCTCATTATTGGAT ATCA ATCTAATAATGAGGAGGGCAG TTTAATGGCCGTCCT YPO0134 147510 - 145135 - | hypothetical protein TERM 159 147244 - 147267 + g 73 -5.8 -4.49337 | overlap 147248 TAGGGTGGCGTTGAT CGCCCCGGCC AGCT GGTCGGTGAG TTTTCCTTGATCTTC TERM 160 147344 - 147362 + g 74 -11.8 -2.85351 | TACCCCAGACGGCTT TCCAACTG ACG CAGTTGGA TATCATCTAACCCGC greB 148044 - 148559 + | transcription elongation factor GreB ompR 148695 - 149414 + | osmolarity response regulator envZ 149411 - 150763 + | osmolarity sensor protein TERM 161 150745 - 150759 + T 84 -11.4 -3.14564 | opp_overlap 150749 GGATGTGAAGCCCAA GCCACC AGC GGTGGC TTGATGGAGGGATAA TERM 162 150864 - 150841 - T 100 -6.7 -5.61913 | AATAAATAGAAAAAA GGGGCAC AATTCTGAAA GTGCCCC CTGTAACGCTAAACT pckA 152517 - 150898 - | phosphoenolpyruvate carboxykinase TERM 163 152700 - 152673 - R 100 -13.4 -3.82097 | GTGAAACGGAGGAAA TGGCCGGGCACC AATA GGTACCCGGCTA AGCATTACGAGGATT hslO 153595 - 152714 - | Hsp33-like chaperonin hslR 154165 - 153758 - | heat shock protein 15 YPO0141 154874 - 154194 - | hypothetical protein YPO0142 157165 - 155018 - | hypothetical protein TERM 164 155431 - 155418 - G 78 -3.7 -5.14563 | opp_overlap 155420, overlap 155420 CTGGTGATCAAAAAA CCGCC CGGA GGTGG GCTATTCAACGCTTC TERM 165 155762 - 155773 + g 71 -5.8 -4.28597 | opp_overlap 155759 ACTGGCATCAGAGCC CTGC GGGT GCAG TTGTTTATTGATTGT YPO0143 157445 - 157639 + | hypothetical protein TERM 166 158056 - 158066 + G 72 -8.2 -3.89617 | AAGAAGTTGGATATG GCGC TGA GCGC TTTGACTTTCTCGCT nudE 157752 - 158297 + | ADP-ribose diphosphatase NudE TERM 167 158377 - 158400 + T 100 -14 -5.10497 | opp_overlap 158377 TAATTTATAAAAAAA CCAGATGATC ATCA GATCATCTGG TTTTTTAGATAAGTT TERM 168 158400 - 158377 - T 100 -14 -5.66684 | opp_overlap 158377 TAATTTATAAAAAAA CCAGATGATC ATCA GATCATCTGG TTTTTTAGATAAGTT mrcA 160988 - 158433 - | peptidoglycan synthetase TERM 169 159784 - 159797 + g 70 -2.3 -5.00616 | overlap 159780 159778 159785 TGCTGACCAGGCTGA ACGAC ATCA GTCGC TTTTTTGGGGACCGG TERM 170 161544 - 161562 + G 75 -8.8 -3.96327 | TGCAGCAATGGCAAG CCTGCTTG GAA CAGGCGGG TTTATCCTCACAAGT TERM 171 161588 - 161598 + G 72 -8.2 -3.83323 | CAAGTGATTGATATT GCGC CAT GCGC TTTACGTTATATGGC TERM 172 161881 - 161892 + G 71 -7.2 -4.10657 | CACACGGTCTTGGTC GCCG CTAA CGGC TTTTGCGCACTATCA YPO0146 161063 - 162004 + | hypothetical protein YPO0147 162004 - 162609 + | hypothetical protein YPO0148 162602 - 163183 + | hypothetical protein YPO0149 163209 - 163577 + | hypothetical protein TERM 173 164967 - 164951 - g 70 -8.7 -3.62418 | ACAAGTTACTGTAAA CGATGGC GAA ACCATCG TGCTGGGCGGGATTT YPO0150 164004 - 165128 + | putative outer membrane porin HofQ aroK 165477 - 165998 + | shikimate kinase I aroB 166055 - 167143 + | 3-dehydroquinate synthase YPO0153 167397 - 168386 + | hypothetical protein TERM 174 168552 - 168514 - g 75 -10.2 -3.34398 | opp_overlap 168541, overlap 168512 168515 GGCTGGTGGGAAATA TCCGCTGGTTGATGACAT ACG ACGCCATCTTCCAGCGGG AGATTGTTTGATAGA TERM 175 168551 - 168515 - g 78 -13.7 -2.60496 | opp_overlap 168541, overlap 168514 168512 GCTGGTGGGAAATAT CCGCTGGTTGATGACAT ACG ACGCCATCTTCCAGCGG GAGATTGTTTGATAG TERM 176 168823 - 168846 + G 73 -9 -3.69094 | TCTCAATCGCCACTG TTATAACGGC CTGT GTCGTTATAA TTTGAGTGGTGAATT TERM 177 168910 - 168890 - g 82 -3.9 -5.24129 | GGTCGCTACAAAAAA CCCTACTTC CCA GAAGCGGAG TTATATTGGTTTGCT TERM 178 168932 - 168944 + G 91 -5.5 -5.38054 | opp_overlap 168932 168933, overlap 168926 168933 TGGTTTGCTGAAAAA TCGCA AAA TGCGG TTTTTGTTTGTGAGC dam 168470 - 169285 + | DNA adenine methylase rpe 169588 - 170265 + | ribulose-phosphate 3-epimerase TERM 179 170471 - 170497 + G 70 -8 -3.79882 | overlap 170450 CGTGAACATAATGCT CAGCTTGTGG CACAGAC CCGCGAGCTG TTTGATCACTATTAT gph 170258 - 170956 + | phosphoglycolate phosphatase trpS 170958 - 171998 + | tryptophanyl-tRNA synthetase TERM 180 172043 - 172020 - T 76 -11 -2.53641 | opp_overlap 172021, overlap 172019 CAACGCATCAGTAAT GTGAGGGGGA AATT TCCCCCTCAT TAATCAGCATTAACC TERM 181 172021 - 172042 + T 100 -14.5 -3.16742 | opp_overlap 172020 172019 AACGCATCAGTAATG TGAGGGGGA AATT TCCCCCTCA TTAATCAGCATTAAC cysG 173565 - 172153 - | siroheme synthase nirC 174459 - 173653 - | nitrite transporter NirC nirD 174988 - 174662 - | nitrite reductase small subunit nirB 177531 - 174985 - | nitrite reductase TERM 182 175383 - 175395 + g 80 -10.5 -3.73072 | opp_overlap 175382 175383 CGGCTGCCAGTAAAT CCGCG TGA CGCGG TTTCATGCCGCCGTT TERM 183 177500 - 177515 + g 100 -7.6 -5.50723 | TGGCCGACCATGCCG TTGCCA ATGA TGGCAA TTTTTATTTTGCTCA TERM 184 178025 - 178038 + G 76 -8.1 -4.15222 | ATGCGCAGGGCGGTT TGGCG CTCC CGCCA TTTATTGAGCCGCAT TERM 185 178409 - 178424 + G 89 -10.4 -4.35524 | TGGGTGCGGATGCGG TGGGGG CGAT CCCCCA TTTTGAATTTACCCG codA 177841 - 179151 + | cytosine deaminase TERM 186 179221 - 179193 - T 78 -10.2 -3.2827 | overlap 179195 TTAGTGAATCATCAA TACCCTGCCACC TTGGC GGCGGCAGGGCG GTAACGCAGATAAAT TERM 187 179219 - 179195 - T 100 -15 -3.20494 | overlap 179193 AGTGAATCATCAATA CCCTGCCACC TTGGC GGCGGCAGGG CGGTAACGCAGATAA YPO0163 180420 - 179236 - | hypothetical protein TERM 188 181171 - 181194 + G 70 -11 -2.68823 | opp_overlap 181158, overlap 181170 181173 AAGTGCCCCGCCAGC CAGTACCGGC CAGT GACGGTACTG ATTATCTGAGGACCA YPO0164 180906 - 182966 + | putative membrane receptor protein TERM 189 183012 - 182989 - T 100 -12.4 -3.40899 | opp_overlap 182989 AATGCGCTAGCAGAA CGTGGCAGGC GATG GCTTGCCACG TTAATAACAATTAAT TERM 190 182989 - 183012 + T 100 -14.6 -3.16921 | opp_overlap 182989 AATGCGCTAGCAGAA CGTGGCAGGC GATG GCTTGCCACG TTAATAACAATTAAT YPO0165 184053 - 183067 - | LacI-family transcriptional regulator TERM 191 183729 - 183744 + g 71 -7.6 -4.10179 | AGTTATACAGCCGCT GAATGG CTAA CCATTC TTTATCTGCATTATC TERM 192 183858 - 183838 - G 74 -2.4 -5.18357 | overlap 183839 TAAGGCACCAAAAAA GCCCCCTC GGTAT GAGGTGGT CACCAACCCCAGCGT YPO0166 185615 - 184302 - | putative glycosyl hydrolase TERM 193 185641 - 185631 - H 71 -8.2 -3.53811 | TGTAGGGGCTCCAAA CGGC TCT GCCG GCGATAAAGTTCAGT TERM 194 185705 - 185737 + H 86 -12.2 -3.00498 | gap 1, opp_overlap 185704 185703 185707, overlap 185707 185709 ATCTGTGGATAAATT CAGGCTCACCATGAT TTTC ATCA-GGTGAGTCTG TCTCTGTACGGTCTC TERM 195 185822 - 185809 - H 84 -5.3 -5.35224 | opp_overlap 185809 TGCAGAAAAACAAAA TGAGA GCGC TCTCA TTTGAAGCAGATTAG TERM 196 185912 - 185944 + H 81 -11.3 -2.8194 | opp_overlap 185908, overlap 185904 AGTAAGAGAATCGTG ATCCAGACTCCAGAA TCT TGCTGGAGTCTGGGA TGTGGTGACTCATTA ppiA 186131 - 186700 + | peptidyl-prolyl cis-trans isomerase A (rotamase A) YPO0168 187026 - 188567 + | hypothetical protein pabA 188810 - 189385 + | para-aminobenzoate synthase component II TERM 197 189421 - 189438 + F 76 -2.7 -5.30686 | CCATGACATCATTTA TCATTTG CTTG CGGATGA TTTTTTATGCATATT TERM 198 190115 - 190133 + F 100 -13.2 -4.01078 | CCAGGGGGTAATCTG CTCTCCTG ATT CAGGAGAG TTTATGGTCACTTTT y1093 190137 - 191159 + | transposase for insertion sequence IS100 TERM 199 191240 - 191226 - g 77 -11.4 -3.3506 | overlap 191217 TGGAAAGCCTTATAA GCGCAG CGC CTGCGC TGTCACAACAGGCAG YPO0172 191156 - 191938 + | transposase/IS protein TERM 200 192820 - 192794 - T 84 -10.1 -3.82218 | gap 1, opp_overlap 192803, overlap 192795 192810 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 201 192821 - 192795 - T 72 -10.1 -2.88849 | gap 1, opp_overlap 192803, overlap 192794 192810 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT YPO0174 195040 - 192920 - | hypothetical protein TERM 202 193478 - 193490 + g 71 -5.5 -4.58395 | opp_overlap 193471 CTGATAAGCCTCCAG TGCCT GAT GGGCA TTTTTACGCAATAAC TERM 203 194452 - 194464 + g 73 -5.5 -4.66833 | GTTGTCTATCGAGTA GCGGT GGT ATCGC TTTTTCGGGTTCAAG TERM 204 195082 - 195112 + r 100 -10.5 -4.57341 | gap 1, opp_overlap 195082 AGAAAACGGGAAAAA CCGGCGCTAATAGC TTCA GCT-TTAACGCCGG TTTTTAGAGGGAATT TERM 205 195112 - 195082 - R 100 -12.7 -4.75063 | gap 1, opp_overlap 195082 AGAAAACGGGAAAAA CCGGCGCTAATAGC TTCA GCT-TTAACGCCGG TTTTTAGAGGGAATT crp 195758 - 195126 - | cAMP-regulatory protein TERM 206 195162 - 195190 + g 78 -6.2 -4.8048 | gap 2 GATCGTTTTACCGTG TGC-GG-AGATCAA GTT TTGATCTTCCAGCA TTTTTAGTATCCGCC YPO0176 196094 - 196501 + | hypothetical protein TERM 207 196513 - 196536 + F 93 -8.9 -4.56775 | opp_overlap 196504 196503 196513 GTAAATGGTGAACCA CCCATAGCC CGGTTT GGTTATGGG TTTTTAGGCCAAAAT TERM 208 196638 - 196668 + G 100 -8.3 -5.3167 | overlap 196631 AATATCGGTTGCCTG TGGGGCGATATCA TTGTT TGTTGTCGCCTCA TTTTCTTTGTTTTTC YPO0177 196573 - 197004 + | hypothetical protein prk 198051 - 197182 - | phosphoribulokinase 1 TERM 209 197366 - 197330 - G 75 -8.7 -3.90038 | overlap 197364 AGCAAATAAGGGAAA TCGATGTGATCCAAACC ACG GAAATGGATCACAACGA AACTTTCGTCTAACG TERM 210 197708 - 197676 - G 72 -4 -4.84311 | gap 1, overlap 197678 CTTCATAGAATAAAA CATCCGTGGGTTCCG GTAG CGGCTCCCAAGGA-G TAAAGGTGCCAGGGA TERM 211 197707 - 197678 - G 71 -7.7 -4.03793 | overlap 197676 TCATAGAATAAAACA TCCGTGGGTTCCG GTAG CGGCTCCCAAGGA GTAAAGGTGCCAGGG YPO0179 198436 - 198200 - | hypothetical protein YPO0180 199413 - 198433 - | putative hydrolase TERM 212 199226 - 199202 - G 71 -5 -4.58283 | opp_overlap 199224, overlap 199204 199224 TAAGGGCTGTAAAAA TTCCCTTCCA AACCG TGGAAGAGCA CCACTCGGGGCTTCT YPO0181 199515 - 200117 + | putative ABC-transport protein TERM 213 200194 - 200232 + F 83 -12.1 -2.74597 | opp_overlap 200201, overlap 200197 200201 200202 AGTACATCTGTTATC GCATAAAGGAATAAA CAATATTCT TTTATTCCTTTATGC TGCTCTCTCTCTCGG tauA 200320 - 201381 + | taurine transporter substrate binding subunit TERM 214 201719 - 201699 - g 77 -9 -4.0274 | gap 1 GGGATGAGTAAAGAA CAGCGGCGG GTAA CCGCC-CTG AAAATGCTAAACCGG tauB 201390 - 202157 + | taurine transporter ATP-binding subunit TERM 215 202722 - 202736 + G 79 -7 -4.64846 | overlap 202720 CCCGTGCATTAGGTG CCAGCC GTT GGCAGG TTTTATGGTTTGTGG tauC 202154 - 203008 + | taurine transporter subunit tauD 203005 - 203853 + | taurine dioxygenase YPO0186 204846 - 203866 - | putative sugar transferase YPO0187 205928 - 204939 - | putative glycosyl transferase TERM 216 205978 - 206011 + H 73 -9.7 -3.04263 | opp_overlap 205968 205971, overlap 205980 AAAATCACGCCGCTC TAGTCGTGCGACT CTAACTCA ATTCGCACGACTA TATTCACGATGCCAT TERM 217 206301 - 206313 + H 75 -9.1 -3.65199 | opp_overlap 206294 206293 GTCATAATCTGCTTA CGCAG TGG CTGCG TTTGAGTGCGGAATT TERM 218 207651 - 207667 + H 100 -6.5 -5.63103 | overlap 207652 TACCGTGCACGGTTG CGATGGC ATG GCCATCA TTTTTTTCATTGGCA TERM 219 207652 - 207666 + H 86 -10 -3.96777 | overlap 207651 ACCGTGCACGGTTGC GATGGC ATG GCCATC ATTTTTTTCATTGGC YPO0190 208229 - 208780 + | glutathione-regulated potassium-efflux system ancillary protein KefG kefB 208784 - 210592 + | glutathione-regulated potassium-efflux system protein KefB YPO0192 210608 - 210829 + | hypothetical protein TERM 220 210950 - 210939 - g 74 -4.4 -4.85545 | ATGAAAGTAACAAAA GACT TGGT AGTC AGCCTGGCTTACCAG slyD 210924 - 211511 + | FKBP-type peptidyl-prolyl cis-trans isomerase TERM 221 211527 - 211559 + T 100 -16.5 -2.87931 | opp_overlap 211514 211534, overlap 211534 TATCTGACCCCGTCA GCAAAAAGCCAGC CTTCATC GCTGGCTTTTTGC TCTGTACGCGATCAC TERM 222 211552 - 211534 - T 81 -7.4 -4.72272 | opp_overlap 211527 211534 CCCCGTCAGCAAAAA GCCAGC CTTCATC GCTGGC TTTTTGCTCTGTACG TERM 223 211534 - 211552 + T 85 -7.4 -4.84527 | opp_overlap 211534, overlap 211527 CCCCGTCAGCAAAAA GCCAGC CTTCATC GCTGGC TTTTTGCTCTGTACG YPO0194 211950 - 211732 - | hypothetical protein TERM 224 212903 - 212889 - g 83 -2.8 -5.41359 | opp_overlap 212889, overlap 212891 AAGCAAATCAAAAAA GGTG GCAAAAT CACC TTGGTTATCCCGCCA fkpA 212265 - 213065 + | FKBP-type peptidyl-prolyl cis-trans isomerase TERM 225 213096 - 213119 + F 100 -9.6 -6.22802 | opp_overlap 213096 ATACTCTTCTCATAA CCGTTACGAT AATT GTCGTGACGG TTTTTTTTTGTGCGC YPO0196 213307 - 214041 + | putative DNA-binding protein YPO0197 214041 - 214436 + | hypothetical protein TERM 226 214619 - 214608 - g 80 -3 -5.30686 | overlap 214597 AACAGCCAGAAAAAA TTCT TGCC AGAA ACTATATTGCTACTT YPO0198 214436 - 214801 + | hypothetical protein YPO0199 214821 - 215108 + | tRNA 2-thiouridine synthesizing protein B rpsL 215246 - 215620 + | 30S ribosomal protein S12 rpsG 215717 - 216187 + | 30S ribosomal protein S7 fusA 216281 - 218389 + | elongation factor G TERM 227 218446 - 218412 - f 72 -9.3 -3.10579 | overlap 218409 GGTTTAAAACAATGA TCCAGTGCTCTCTCA TTTAG TGGGAGAGCACAAGA GTAAGGAATATAGTC tuf 218462 - 219646 + | elongation factor Tu TERM 228 219696 - 219681 - f 91 -10.4 -4.10953 | opp_overlap 219681 ATTGATCAAACCAAA GGGTGC CTCG GCACCC TTTTTTATTGTGCCC TERM 229 219681 - 219696 + F 100 -10.4 -5.55769 | opp_overlap 219681 ATTGATCAAACCAAA GGGTGC CTCG GCACCC TTTTTTATTGTGCCC TERM 230 219736 - 219718 - f 100 -16 -4.37092 | opp_overlap 219718 ATTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC TERM 231 219718 - 219736 + F 100 -16 -3.07307 | opp_overlap 219718 ATTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC tnp 219849 - 220307 + | transposase for the IS1541 insertion element TERM 232 220385 - 220409 + F 93 -9.9 -4.25056 | opp_overlap 220388, overlap 220387 220388 ATAGGCGCATATGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTGATAAAGTG TERM 233 220387 - 220407 + F 100 -12.5 -3.72374 | opp_overlap 220388, overlap 220385 220388 AGGCGCATATGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTGATAAAG TERM 234 220406 - 220388 - f 100 -16 -4.8048 | opp_overlap 220387 220385 220388 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTGATAAA TERM 235 220388 - 220406 + F 100 -16 -2.82942 | opp_overlap 220388, overlap 220387 220385 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTGATAAA bfd 220495 - 220689 + | bacterioferritin-associated ferredoxin bfr 220768 - 221241 + | bacterioferritin, iron storage and detoxification protein rpsJ 221655 - 221966 + | 30S ribosomal protein S10 rplC 221999 - 222628 + | 50S ribosomal protein L3 TERM 236 222677 - 222665 - g 77 -10.5 -3.54414 | opp_overlap 222659, overlap 222663 ATTGGTAATGAAAGA CGCGC CAG GCGCG CTGACTGTTTCCGAA rplD 222645 - 223250 + | 50S ribosomal protein L4 TERM 237 223531 - 223511 - g 74 -9.7 -3.57462 | opp_overlap 223514, overlap 223514 TACGTCACCCTGAAA GAAGGCCAG AAT CTGGACTTC ATCGGCGGCGCAGAG rplW 223247 - 223549 + | 50S ribosomal protein L23 rplB 223566 - 224390 + | 50S ribosomal protein l2 rpsS 224405 - 224683 + | 30S ribosomal protein S19 rplV 224698 - 225030 + | 50S ribosomal protein L22 TERM 238 225194 - 225162 - g 74 -10 -3.61654 | overlap 225163 GACAGCGACTTTAAA GTTCGCCAATTCCT GACTA AGGAATTAGCGAAA GCTTCCGTTTCTCGC TERM 239 225193 - 225163 - g 79 -13.5 -2.76671 | overlap 225162 ACAGCGACTTTAAAG TTCGCCAATTCCT GACTA AGGAATTAGCGAA AGCTTCCGTTTCTCG rpsC 225048 - 225746 + | 30S ribosomal protein S3 rplP 225759 - 226169 + | 50S ribosomal protein L16 rpmC 226169 - 226360 + | 50S ribosomal protein L29 rpsQ 226360 - 226614 + | 30S ribosomal protein S17 TERM 240 226664 - 226638 - f 70 -8 -3.69069 | opp_overlap 226638, overlap 226641 CCAACTCGAACATAA TAAGCGGCTC TGAAAAT GGGCCGCTTA TTTTTTCTACCCACT TERM 241 226638 - 226664 + F 100 -10.2 -5.24531 | opp_overlap 226638 226641 CCAACTCGAACATAA TAAGCGGCTC TGAAAAT GGGCCGCTTA TTTTTTCTACCCACT rplN 226795 - 227166 + | 50S ribosomal protein L14 rplX 227177 - 227491 + | 50S ribosomal protein L24 TERM 242 227668 - 227650 - g 76 -7.4 -4.30987 | opp_overlap 227649, overlap 227636 ATCGCTGACAAGAAA CTGCTGGA TAA TGCAGCAG CTGACTTGGCAGCAA rplE 227506 - 228045 + | 50S ribosomal protein L5 TERM 243 228101 - 228080 - g 77 -8.7 -4.02021 | overlap 228081 228083 AAGCAATCAATGAAA GCACGCGAA GTTG TTCGCGTGA AACTAGCTAACAAAT TERM 244 228100 - 228081 - g 76 -12.2 -3.00128 | overlap 228080 228083 AGCAATCAATGAAAG CACGCGAA GTTG TTCGCGTG AAACTAGCTAACAAA rpsN 228059 - 228364 + | 30S ribosomal protein S14 rpsH 228398 - 228790 + | 30S ribosomal protein S8 rplF 228805 - 229338 + | 50S ribosomal protein L6 rplR 229348 - 229701 + | 50S ribosomal protein L18 TERM 245 229922 - 229902 - g 70 -4.6 -4.67353 | opp_overlap 229914, overlap 229914 GCAGCGATCCAAAAA GCGATGGA AAAAG CCCGTCGC GCTATGATTAACGTT rpsE 229716 - 230219 + | 30S ribosomal protein S5 rpmD 230222 - 230401 + | 50S ribosomal protein L30 rplO 230405 - 230839 + | 50S ribosomal protein L15 TERM 246 231281 - 231310 + G 79 -7.9 -4.45168 | overlap 231273 GAATATGCCTGGGAT GCAAGGTCTGG TAATCAAT CCAGGCTTTGC TTTCTATTTTACCGC secY 230847 - 232178 + | preprotein translocase subunit SecY rpmJ 232212 - 232328 + | 50S ribosomal protein L36 TERM 247 232359 - 232388 + F 100 -12.3 -4.61868 | gap 1 TTTCTTGCAAAGTTG GGTTGAGCTGGCTA GAT TAGCCAGC-CAATC TTTTGTATGTGACTG rpsM 232476 - 232832 + | 30S ribosomal protein S13 rpsK 232849 - 233238 + | 30S ribosomal protein S11 TERM 248 233228 - 233244 + F 82 -7.9 -4.42851 | opp_overlap 233228 233227 GTCCGCCGAAAAAGC GCCGCGT ATA ACGCTGC TTTTAGGTTTGTTGG rpsD 233269 - 233889 + | 30S ribosomal protein S4 TERM 249 233874 - 233892 + F 77 -10.4 -3.14132 | ACACCTGATCGTCGA GCTTTACT CCA AGTAAAGC TTAGTACCAAAGAGA TERM 250 234821 - 234809 - g 73 -3.4 -5.01732 | AACCTGGGTAAAAAA TCTC TTACT GAGA TTAAAGACGTGCTCG rpoA 233915 - 234904 + | DNA-directed RNA polymerase subunit alpha TERM 251 234994 - 235022 + G 77 -10.4 -3.57246 | gap 1, overlap 234990 234992 GTAACAGCAGCCATC GCCAGGCTATGTT CCGT AACATGGCC-GGC TCTTTGGTTCGTCAT TERM 252 235216 - 235190 - g 71 -11.4 -2.73123 | opp_overlap 235187 235215 AAAACTGTTTAACGA GCTAGGCCCGCG TTT CGCGAGCCGCGC CGGTGGTTACACTCG rplQ 234945 - 235334 + | 50S ribosomal protein L17 TERM 253 235380 - 235343 - f 100 -20.1 -3.62032 | opp_overlap 235355, overlap 235344 235355 AGAGTAATCTGTAAA CGCGTAAAAAAACCGGG CTTG CCCGGTTTTTTTACGCC CACCATATACAGCTT TERM 254 235379 - 235344 - f 100 -23.6 -2.76737 | opp_overlap 235355, overlap 235343 235355 GAGTAATCTGTAAAC GCGTAAAAAAACCGGG CTTG CCCGGTTTTTTTACGC CCACCATATACAGCT TERM 255 235368 - 235355 - f 100 -9.5 -5.4477 | opp_overlap 235355, overlap 235344 235343 AAACGCGTAAAAAAA CCGGG CTTG CCCGG TTTTTTTACGCCCAC TERM 256 235355 - 235368 + F 100 -9.5 -5.40072 | opp_overlap 235344 235343 235355 AAACGCGTAAAAAAA CCGGG CTTG CCCGG TTTTTTTACGCCCAC zntR 235781 - 236206 + | zinc-responsive transcriptional regulator TERM 257 236446 - 236491 + G 100 -17.1 -2.90615 | opp_overlap 236443 236444, overlap 236449 AAAAGGTAGTAACTG GGAGGCCAGTGGTAAGCAATC AATA GATTTTTTACTACTGGCCTTC TGATTTAAAAGAAAT TERM 258 236449 - 236488 + G 91 -15.2 -3.60151 | opp_overlap 236443 236444, overlap 236446 AGGTAGTAACTGGGA GGCCAGTGGTAAGCAATC AATA GATTTTTTACTACTGGCC TTCTGATTTAAAAGA YPO0237 236294 - 236494 + | hypothetical protein mscL 237017 - 236604 - | large-conductance mechanosensitive channel TERM 259 236781 - 236767 - G 74 -3.6 -4.95547 | GCTACAATAACAAAA TCAAAA ATG CTTTGA ATAAATGTACCATAA trkA 238532 - 237156 - | potassium transporter peripheral membrane component TERM 260 237537 - 237557 + g 74 -3.9 -5.00884 | ATCGACGTAAGCACT GCGTTGG ATAAGTA CCATCGC TTTTTTCGCACCCAT YPO0240 239877 - 238588 - | 16S rRNA methyltransferase B TERM 261 238625 - 238645 + g 76 -5.3 -4.86731 | opp_overlap 238620 TAGAAGAAACCATCA CCGTCCTCA GGA TGTGGAAGG TTTTGTTTACCAGGC TERM 262 239903 - 239888 - R 89 -6.8 -5.32944 | TTCATAACCAAAAAA GCTGAC AAAC GCCAGC AAATAAAGGGAGAAG fmt 240918 - 239971 - | methionyl-tRNA formyltransferase TERM 263 240439 - 240455 + g 79 -8.1 -4.37886 | ACTGGTATCTTCTGG TTGAATG GCA CATTCAA TTTTATGCAGCATAG TERM 264 240873 - 240849 - G 89 -15 -3.17622 | overlap 240853 TATGTTGAGAAGAGA GCAACGCGCC TAAAT GGCGCGCTGC AAAATCAGGAGTTCC TERM 265 240869 - 240853 - G 75 -10.8 -3.40191 | overlap 240849 TTGAGAAGAGAGCAA CGCGCC TAAAT GGCGCG CTGCAAAATCAGGAG def 241455 - 240943 - | peptide deformylase TERM 266 242268 - 242285 + G 74 -9.9 -3.54414 | overlap 242265 GTGTTAGTCGTTGAG GCCACTT TAAA AAGTGGC TCTTTGATTACCGCT YPO0243 241590 - 242711 + | hypothetical protein YPO0244 242719 - 243156 + | hypothetical protein YPO0245 243197 - 243736 + | putative DNA-binding protein TERM 267 244235 - 244252 + G 73 -9.1 -3.67792 | overlap 244219 ATTACCGGTGTTATC CGGTCAC GTTG GTGGCCG TTTGAATCCATCTGA YPO0245a 243738 - 244310 + | putative ribosome maturation factor aroE 244319 - 245140 + | shikimate 5-dehydrogenase TERM 268 245447 - 245461 + T 72 -7.8 -3.87075 | opp_overlap 245440, overlap 245440 GTTACCAATGGTACA GCCGTG TAG CATGGC TTTATGACCAATAGT YPO0248 246574 - 245792 - | transposase/IS protein TERM 269 246490 - 246504 + g 77 -11.4 -3.3506 | overlap 246503 CTGCCTGTTGTGACA GCGCAG GCG CTGCGC TTATAAGGCTTTCCA y1093 247593 - 246571 - | transposase for insertion sequence IS100 TERM 270 247615 - 247597 - R 100 -13.2 -4.01078 | AAAAGTGACCATAAA CTCTCCTG AAT CAGGAGAG CAGATTACCCCCTGG TERM 271 248679 - 248692 + r 85 -9.5 -4.1721 | opp_overlap 248679 TTTGTCAGCAATCTA GGCCC CTAG GGGCC TTTTAACCTGTAAAT actP 250367 - 248712 - | acetate permease YPO0252 250675 - 250364 - | hypothetical protein TERM 272 250729 - 250706 - R 76 -11 -2.64199 | opp_overlap 250706 250706, overlap 250705 GAGGCATCAATTAAG TTTGCCGCCT ATAT AGGCGGCACA ATTTACGACGGTGTC TERM 273 250706 - 250729 + r 76 -11 -2.72829 | opp_overlap 250706 250705, overlap 250706 GAGGCATCAATTAAG TTTGCCGCCT ATAT AGGCGGCACA ATTTACGACGGTGTC TERM 274 250706 - 250730 + r 76 -9.4 -3.5525 | gap 1, opp_overlap 250706 250705, overlap 250706 GAGGCATCAATTAAG TT-TGCCGCCT ATAT AGGCGGCACAA TTTACGACGGTGTCT acs 252690 - 250732 - | acetyl-CoA synthetase TERM 275 252954 - 252970 + H 76 -6.7 -4.43909 | opp_overlap 252954, overlap 252951 GACTAAAGTAATTTA CATTTAT TAA ATAAATG TTGTTTTATTACCAT gltP 253545 - 254861 + | glutamate/aspartate:proton symporter TERM 276 254942 - 254970 + T 100 -17.5 -5.38054 | opp_overlap 254934 AATAGTATCTACCCA CTCCCCGTCAGCA TCA TACTGACGGGGAG TTTTTATTTGTCGCC YPO0255 255671 - 255039 - | putative two-component response regulator YPO0256 258503 - 255684 - | two-component sensor/regulator YPO0257 258675 - 260246 + | possible type III secretion protein YPO0258 260248 - 261462 + | putative type-III secretion protein YPO0259 261481 - 261702 + | putative type III secretion apparatus TERM 277 262274 - 262292 + G 71 -6 -4.386 | overlap 262276 ATTGGGTATTTCGAC CCGGAAAT TGA ATTTCCTG TTTTATGAGAAATTC YPO0260 261876 - 262496 + | putative AraC-family regulatory protein YPO0260a 262506 - 262721 + | putative type III secretion apparatus YPO0261 262718 - 262966 + | putative type III secretion apparatus YPO0262 263064 - 263315 + | putative type III secretion apparatus YPO0263 263312 - 264043 + | type III secretion system apparatus lipoprotein YPO0264 264218 - 264811 + | hypothetical protein YPO0265 264808 - 265455 + | putative type III secretion system apparatus protein TERM 278 266381 - 266400 + G 83 -3.4 -5.42514 | overlap 266376 266375 TTTATCACTTTGGCG GCCGCGGT TGCG GCTCCGGC TTTTTTACTTTATCG YPO0266 265448 - 267496 + | secretion system apparatus protein SsaV YPO0267 267483 - 268820 + | type III secretion system ATPase YPO0268 268817 - 269218 + | type III secretion system apparatus protein TERM 279 269531 - 269519 - g 86 -9.1 -4.54449 | ACAGCGCATACAAAA CCGCT GGC AGCGG CAACTGCATCAGTTA YPO0268a 269382 - 269597 + | hypothetical protein YPO0269 269617 - 270537 + | type III secretion system protein YPO0270 270664 - 271314 + | type III secretion system protein YPO0271 271311 - 271604 + | putative type III secretion apparatus protein TERM 280 272267 - 272278 + G 91 -7.2 -5.1244 | opp_overlap 272267 CGATGCCCATTAAAA GCGC ACTG GCGC TTTTTCTCTTACTGA TERM 281 272278 - 272267 - g 74 -7.2 -4.26076 | opp_overlap 272267 CGATGCCCATTAAAA GCGC ACTG GCGC TTTTTCTCTTACTGA YPO0272 271606 - 272400 + | putative type III secretion apparatus protein YPO0273 272390 - 273457 + | secretion system apparatus protein SsaU TERM 282 273578 - 273562 - f 76 -9.5 -3.40878 | overlap 273560 ATTATGTGAATAATA GGCTTAT TAT ATAAGCC TCAGACTGCTGACAA TERM 283 273667 - 273641 - f 84 -10.1 -3.82218 | gap 1, opp_overlap 273650, overlap 273642 273657 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 284 273668 - 273642 - f 72 -10.1 -2.88849 | gap 1, opp_overlap 273650, overlap 273641 273657 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT TERM 285 273746 - 273768 + F 72 -7.8 -3.77489 | opp_overlap 273749, overlap 273747 273749 TTGTCAATAACCTCA ATAGGCTTAT TAT ATAAGCCTAC TTTCCCTGTTACCTT TERM 286 273747 - 273767 + F 81 -11.3 -2.8577 | opp_overlap 273749, overlap 273746 273749 TGTCAATAACCTCAA TAGGCTTAT TAT ATAAGCCTA CTTTCCCTGTTACCT TERM 287 273765 - 273749 - f 72 -9.5 -3.12749 | opp_overlap 273747 273746 273749 TCAATAACCTCAATA GGCTTAT TAT ATAAGCC TACTTTCCCTGTTAC TERM 288 273749 - 273765 + F 71 -9.5 -2.974 | opp_overlap 273749, overlap 273747 273746 TCAATAACCTCAATA GGCTTAT TAT ATAAGCC TACTTTCCCTGTTAC TERM 289 274410 - 274377 - g 70 -2.3 -5.05228 | overlap 274378 ATTAAACTACAAAAA GTGACTGCCGCCTCA CCAC TGACGCAGCACCCAG CCAGAGCGGCACGCC YPO0274 273840 - 275054 + | putative inner membrane protein YPO0275 275051 - 275320 + | hypothetical protein YPO0276 276384 - 275398 - | putative LysR-family transcriptional regulator TERM 290 276175 - 276146 - G 74 -10.1 -3.63839 | gap 1, opp_overlap 276146 276145 276143 276142 276169 TGATGAAACAAGTAA TCGCCAGCATCGGT TAA AACGATGCTG-CGA GTGGTTCTTTTTAAT YPO0277 276551 - 277837 + | putative transmembrane transport protein metC 277883 - 279064 + | cystathionine beta-lyase TERM 291 279165 - 279177 + T 77 -4.7 -5.0538 | GTTGGTGCTTTGGAA CCGCC ATA GGCTG TTTTTTAGCATAGCG hmuV 280005 - 279205 - | hemin importer ATP-binding subunit TERM 292 279597 - 279585 - G 83 -9.1 -4.4009 | CGCCACCGGATAAAA CGCGA TAG TCGCG CTGTGCCAGTGCCAG hmuU 281002 - 279998 - | hemin transport system permease protein HmuU hmuT 281838 - 280999 - | hemin-binding periplasmic protein TERM 293 281634 - 281667 + g 74 -11 -3.11192 | opp_overlap 281634 281637 281639, overlap 281636 GCGTGCGCATATAAC CAACATCAGGCAGC TTTTGC GCTGCCTGAGGCTG TTGACTGGTGCTGTC TERM 294 281667 - 281634 - G 78 -13.2 -2.68823 | opp_overlap 281634 281636, overlap 281637 281639 GCGTGCGCATATAAC CAACATCAGGCAGC TTTTGC GCTGCCTGAGGCTG TTGACTGGTGCTGTC TERM 295 281664 - 281637 - G 77 -11.3 -3.49618 | opp_overlap 281636 281634, overlap 281634 281639 TGCGCATATAACCAA CATCAGGCAGC TTTTGC GCTGCCTGAGG CTGTTGACTGGTGCT TERM 296 281662 - 281639 - G 81 -12.5 -3.32023 | opp_overlap 281636 281634, overlap 281637 281634 CGCATATAACCAACA TCAGGCAGC TTTTGC GCTGCCTGA GGCTGTTGACTGGTG hmuS 282872 - 281835 - | hemin transport protein TERM 297 282958 - 282930 - R 82 -10.3 -3.60419 | opp_overlap 282926 ATTGTCAAATGATAA TCCGGCAAGCCAC AAA ATGGATTACCGGA TGAATGATTTCAGAC hmuR 285021 - 282991 - | hemin receptor precursor YPO0284 286086 - 285436 - | hypothetical protein YPO0285 286665 - 286120 - | hypothetical protein TERM 298 286311 - 286321 + g 71 -5.4 -4.52047 | overlap 286302 GTTCCAGCAGGGCGA TTGC CTG GCAA TTTTGTGCTCTGATA YPO0286 287975 - 286662 - | coproporphyrinogen III oxidase TERM 299 288204 - 288185 - R 70 -3.5 -4.78981 | opp_overlap 288197, overlap 288187 288199 ATCAAGCAAAAGAAA TGGGGGT TGATAT AGCCCCA CCCATCAGAGTGAGG YPO0287 289116 - 288316 - | putative methylenetetrahydrofolate reductase TERM 300 288546 - 288533 - G 74 -2.3 -5.09521 | opp_overlap 288534, overlap 288534 TCAATAAATGAAAAA TTGCC AAGT GGCAT TATGGATGGCGTAAA YPO0288 289919 - 289431 - | hypothetical protein YPO0289 291275 - 290316 - | putative ATP/GTP-binding protein YPO0290 292354 - 291275 - | hypothetical protein TERM 301 292062 - 292043 - G 73 -12.2 -2.57944 | overlap 292042 GAGCATCACACCAAG TGGTACGC CCGC GCGTACCA AGCTGGCGAGCACGA YPO0291 293159 - 292347 - | hypothetical protein TERM 302 292634 - 292623 - G 70 -4.4 -4.66938 | ACGGTGAATATAAAA TCCA TCAG TGGA AAAGAGGGATTCCAG YPO0292 294288 - 293152 - | hypothetical protein TERM 303 293883 - 293899 + g 76 -4.3 -4.94058 | AATAGAGCAGGTGAT CCGTTGC ATG GCTATGG TTTTCTTTGAATTCG YPO0293 295361 - 294300 - | hypothetical protein TERM 304 294925 - 294910 - G 71 -6 -4.30576 | TTTTCAGTATCAAAA GGCGGG TTAG CCAGCC ATTCACGCAATTCAT TERM 305 295159 - 295174 + g 71 -6.1 -4.3467 | opp_overlap 295159 295170 AATGCTTTCACGATA TGGCG GATAAA CGCCA TTTTGGTGTCAAGAT terZ 295637 - 296230 + | tellurium resistance protein TERM 306 296246 - 296258 + F 77 -10.5 -3.12327 | overlap 296244 TGAATCTGATGCCTG GGGGC AAT GCCCC TGTTGCGTCTCAGAC TERM 307 296387 - 296405 + G 71 -7.4 -4.03234 | ATGGTCAACCGGTTA CGGATGAT AGC ACCATCCG TTTGTCTGGGCAGGG TERM 308 297353 - 297339 - g 72 -10 -3.45634 | AGTTGAACGAATTAA CCGCTA TTT TAGCGG ACACAAAGAAATGGA terA 296362 - 297414 + | putative tellurite resistance protein TERM 309 297626 - 297611 - g 83 -3.3 -5.42605 | GGAAGAAAAACAAAA GATGA TCATGT TCATC AAGCAGTCGCCTGAA TERM 310 297697 - 297687 - g 71 -6.8 -4.1552 | GAGTTCTTTAACAAA CTGG TTA CCAG CTATGAATTTGATGC terB 297447 - 297902 + | tellurite resistance protein terC 297924 - 298961 + | tellurium resistance protein terD 299025 - 299603 + | tellurium resistance protein TERM 311 299734 - 299758 + F 100 -12.3 -3.61268 | opp_overlap 299724 299736 ATTAACGTATTCATA TATTCAGGGCA AAA TGCTCTGAATA TTTAACACTTCAGTG terE 299787 - 300362 + | tellurium resistance protein TERM 312 300384 - 300402 + F 100 -12.4 -5.93809 | opp_overlap 300384 CCCGTTTCAATTAAA CCCTGCTG CAT CGGCAGGG TTTTTTTTGTGCCCA TERM 313 300402 - 300384 - f 86 -10.2 -3.90112 | opp_overlap 300384 CCCGTTTCAATTAAA CCCTGCTG CAT CGGCAGGG TTTTTTTTGTGCCCA TERM 314 300423 - 300441 + F 100 -16 -3.07307 | opp_overlap 300423 TTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC TERM 315 300441 - 300423 - f 100 -16 -4.36914 | opp_overlap 300423 TTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC tnp 300554 - 301012 + | transposase for the IS1541 insertion element TERM 316 301090 - 301114 + F 100 -9.9 -4.46514 | opp_overlap 301093, overlap 301076 301092 301093 ATAGGCGCATATGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTTCGCTCAAT TERM 317 301092 - 301112 + F 100 -12.5 -3.83744 | opp_overlap 301093, overlap 301090 301076 301093 AGGCGCATATGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTTCGCTCA TERM 318 301093 - 301111 + F 100 -16 -2.89523 | opp_overlap 301093, overlap 301092 301090 301076 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTCGCTC TERM 319 301111 - 301093 - f 100 -16 -4.8048 | opp_overlap 301093 301092 301090 301076 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTCGCTC YPO0301 301786 - 302424 + | hypothetical protein TERM 320 303009 - 303021 + G 70 -10.5 -3.02013 | opp_overlap 303008 GTGAGAATATGGAAG CCCGG TGG CCGGG TATGGTTGTTAAACT YPO0302 302675 - 305053 + | putative outer membrane fimbrial usher protein YPO0303 305125 - 305868 + | putative periplasmic chaperone protein YPO0304 305876 - 306133 + | hypothetical protein TERM 321 307505 - 307485 - g 72 -8.3 -3.88291 | opp_overlap 307485 GACGAGCTGGATAAA CGTAATCCG GGG CTGATTACG TTTACGCATTGCCCA TERM 322 307803 - 307819 + G 71 -7.2 -4.07568 | opp_overlap 307803 GCGGTAACCCATACA CCTCGC TACTT GCGGGG TTTTACACCGGGGCA TERM 323 308476 - 308493 + G 70 -8.3 -3.79138 | opp_overlap 308466, overlap 308480 308482 ATTTACTGGGGTTCA CCCCCGG GCAG CAGGGGG TTTGCTGCGTGTATT YPO0306 307245 - 308645 + | hypothetical protein TERM 324 308657 - 308647 - f 75 -3.2 -5.1471 | overlap 308656 ACGAGAAAAAATAAA TCCC AAA GAGA TGGCTTGCTATTTTA YPO0307 309068 - 309322 + | hypothetical protein YPO0308 309654 - 311711 + | putative oxidoreductase TERM 325 311740 - 311719 - T 74 -10.1 -3.14878 | overlap 311717 311722 GTCGTTAATCCAACA GGAGGTGCC GAGA GGCACCTCA GACTGCTGACAAACC TERM 326 311737 - 311722 - T 75 -10.4 -2.77791 | overlap 311719 311717 GTTAATCCAACAGGA GGTGCC GAGA GGCACC TCAGACTGCTGACAA TERM 327 311826 - 311800 - T 84 -10.1 -3.82218 | gap 1, opp_overlap 311809, overlap 311801 311816 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 328 311827 - 311801 - T 72 -10.1 -2.88849 | gap 1, opp_overlap 311809, overlap 311800 311816 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT YPO0309 315771 - 312055 - | hypothetical protein TERM 329 313279 - 313299 + g 70 -11.1 -2.50816 | overlap 313278 GTTCACCCGGACCGA GGTGGTGCC GGT GGCATCGCC GTTGATCACTAACCG TERM 330 315616 - 315652 + g 76 -8 -4.21933 | overlap 315618 ACCTGGCCGGGTCTC AACGGCGATATCCGTG CCGAA CAGGGATATCGCGGTG TTATTTTCACCTTCG TERM 331 315618 - 315650 + g 80 -10.6 -3.70108 | overlap 315616 CTGGCCGGGTCTCAA CGGCGATATCCGTG CCGAA CAGGGATATCGCGG TGTTATTTTCACCTT TERM 332 316114 - 316126 + H 70 -2.7 -5.01823 | ATAAGACCCGGCTAA TTCTT TGT AGGAA TTTTCTTGTTATTGT TERM 333 316628 - 316640 + H 72 -7.7 -3.87925 | CGGGTACCTATTCTG CGCTA CAA TAGCG TTCTGTTTACTAATT ubiC 316696 - 317220 + | chorismate pyruvate lyase ubiA 317386 - 318252 + | 4-hydroxybenzoate octaprenyltransferase TERM 334 318366 - 318344 - T 100 -10.6 -5.09426 | opp_overlap 318344 318364 GGTAATGGTAAAAAA TGGCCGGA TAATGAG TCCGGCCA TTGTTATGGTATTCA TERM 335 318344 - 318366 + T 95 -11.3 -3.89291 | opp_overlap 318344, overlap 318364 GGTAATGGTAAAAAA TGGCCGGAT AATGA GTCCGGCCA TTGTTATGGTATTCA TERM 336 318386 - 318406 + T 93 -12.5 -3.0644 | opp_overlap 318387, overlap 318392 TATGGTATTCAGAAA ACCCCCTGC TAG GCAGGGGGC TGTTAAGCATTGAGT TERM 337 318405 - 318387 - T 100 -16 -4.42653 | opp_overlap 318386 318392 ATGGTATTCAGAAAA CCCCCTGC TAG GCAGGGGG CTGTTAAGCATTGAG plsB 320910 - 318433 - | glycerol-3-phosphate acyltransferase TERM 338 320433 - 320417 - G 70 -3 -4.83169 | gap 1, overlap 320418 ACGGTGGTAGAAAAA CGC-ACA AAAC TGTCGCG CCCCAACCACAATAC TERM 339 320831 - 320846 + g 76 -6.8 -4.57341 | TCAGAGACCGGATCT GCAGGG ATAA CCTTGC TTTTTACCAACAATT TERM 340 320952 - 320962 + H 71 -6.8 -4.18401 | opp_overlap 320952 TTCGTCGCAAGGATA CCAG AAA CTGG TTTTGAGATCTGTGG TERM 341 321189 - 321206 + G 70 -3.3 -4.84642 | CCTTCTGGTTGGATG TGGGTGC CATA GCGCGCA TTTTATTAATTTGCA YPO0313 321038 - 321409 + | diacylglycerol kinase lexA 321534 - 322142 + | LexA repressor TERM 342 322169 - 322197 + T 78 -9 -3.88015 | gap 1, opp_overlap 322172, overlap 322170 322172 TTCCTCCCAGAATAA TA-AGCCGTGCCT GTTG AGGTACGGCTCTA TTTCATGATTCTCTA TERM 343 322170 - 322195 + T 78 -9.7 -3.51793 | opp_overlap 322172, overlap 322169 322172 TCCTCCCAGAATAAT AAGCCGTGCCT GTTG AGGTACGGCTC TATTTCATGATTCTC TERM 344 322193 - 322172 - T 86 -10.1 -4.02817 | opp_overlap 322170 322169 322172 CTCCCAGAATAATAA GCCGTGCCT GTTG AGGTACGGC TCTATTTCATGATTC TERM 345 322172 - 322193 + T 95 -12.3 -3.32233 | opp_overlap 322172, overlap 322170 322169 CTCCCAGAATAATAA GCCGTGCCT GTTG AGGTACGGC TCTATTTCATGATTC YPO0315 322811 - 322302 - | zinc uptake transcriptional repressor TERM 346 322754 - 322788 + g 95 -12.2 -4.36411 | TCAGCCGGACGTTTC GTTGTTGGCACAGGCT TTC AGCTTGTGCGAGCAGC TTTTCCTGATTGATA YPO0316 323066 - 324103 + | tRNA-dihydrouridine synthase A TERM 347 324213 - 324246 + F 100 -15.5 -3.13908 | overlap 324207 TTCGGCAAATTGGGC CCCCGAATTATTTAC TGGC GTAAGTGATTCGGGG TTCACTCATTCACTT pspG 324619 - 324837 + | phage shock protein G TERM 348 325040 - 325024 - T 71 -3 -5.03994 | gap 1, opp_overlap 325032, overlap 325026 TGTTAGAGATAAAAA TAGCCGT ATAA ACGGC-A CGTTCATTTACGTGA TERM 349 325039 - 325026 - T 76 -8.1 -4.14422 | opp_overlap 325032, overlap 325024 TTAGAGATAAAAATA GCCGT ATAA ACGGC ACGTTCATTTACGTG TERM 350 325116 - 325143 + T 100 -14.9 -4.69664 | opp_overlap 325116 325108 325107 325118 325120 AAGAAAGTGTAATGA CAGAGGGCTCC TTAATC GGGGCCCTCTG TTTTTCAATCATGTA TERM 351 325143 - 325116 - T 89 -12.7 -2.78395 | opp_overlap 325116, overlap 325108 325107 325118 325120 AAGAAAGTGTAATGA CAGAGGGCTCC TTAATC GGGGCCCTCTG TTTTTCAATCATGTA TERM 352 325141 - 325118 - T 71 -9.5 -2.9296 | opp_overlap 325116, overlap 325116 325108 325107 325120 GAAAGTGTAATGACA GAGGGCTCC TTAATC GGGGCCCTC TGTTTTTCAATCATG qor 326165 - 325182 - | quinone oxidoreductase, NADPH-dependent TERM 353 325375 - 325397 + g 70 -2.6 -4.99134 | overlap 325379 TAGACATTCAGTGAA GGGCGGGT GACATAG ATCCCCCC TTTTTGGTTTAGAAT dnaB 326497 - 327903 + | replicative DNA helicase TERM 354 328626 - 328606 - g 70 -9.7 -3.28712 | opp_overlap 328594 CTGCGGTGGCCACAA GCGCACC GTGATTG GGTGCGC CCAGGGATTGTGCTG TERM 355 328783 - 328793 + G 70 -8.2 -3.727 | ACCTGGGTCAGTGAG CGCG ATA CGCG TTTAGGTGTGATCGC alr 328000 - 329079 + | alanine racemase tyrB 329265 - 330458 + | aromatic amino acid aminotransferase YPO0323 330985 - 331344 + | hypothetical protein TERM 356 331398 - 331432 + T 74 -9.4 -3.35088 | gap 1, overlap 331400 ACGCTGAATGTCATA CC-CTCTGGAGCAAT ACATTG ATTGCCCCAGAGTGG TTCATTAAACGGTTT TERM 357 331400 - 331429 + T 77 -10.8 -2.84098 | overlap 331398 GCTGAATGTCATACC CTCTGGAGCAAT ACATTG ATTGCCCCAGAG TGGTTCATTAAACGG uvrA 334280 - 331437 - | excinuclease ABC subunit A ssb 334738 - 335286 + | single-strand DNA-binding protein TERM 358 335375 - 335394 + T 100 -15 -3.52073 | opp_overlap 335372 335373 ATTAGCTTTAAACGG CCGCGCCA CGGA TGGCGCGG TTCTAGTATTCAGGA YPO0326 335847 - 335533 - | hypothetical protein YPO0327 337009 - 335861 - | probable alcohol dehydrogenase rhaD 337900 - 337076 - | rhamnulose-1-phosphate aldolase TERM 359 337422 - 337435 + g 72 -3.8 -4.88067 | AACAGGCGCGTGAAG CTGG CGTTCT CCAG TTTTTGTACATAACT rhaA 339169 - 337913 - | L-rhamnose isomerase rhaB 340623 - 339166 - | rhamnulokinase YPO0331 340646 - 340828 + | hypothetical protein TERM 360 341029 - 341010 - f 72 -9.2 -3.10164 | CTATCGAGGACTGAA GCAGGGCG ATTT CGCCGTGC CTGTCGAAAGAGGGC rhaS 341050 - 341871 + | transcriptional activator RhaS rhaR 342004 - 342876 + | transcriptional activator RhaR TERM 361 342959 - 342929 - T 86 -11.3 -3.25896 | gap 1, opp_overlap 342928, overlap 342932 CGATTAGCCATAAGA TAACGGGCAG-GTT TTTC AACGCTGCCCGTCA ATATCATCATCTTTA TERM 362 342956 - 342932 - T 88 -10.8 -3.76568 | gap 1, opp_overlap 342928, overlap 342929 TTAGCCATAAGATAA CGGGCAG-GTT TTTC AACGCTGCCCG TCAATATCATCATCT rhaT 344059 - 343025 - | rhamnose-proton symporter YPO0335 344213 - 344479 + | hypothetical protein TERM 363 344879 - 344864 - T 89 -7.5 -5.05116 | opp_overlap 344864 344877 TTAGAAATAACAAAA CCCGC ACATTG GCGGG TTCGTTGACATTAAA YPO0337 345340 - 344915 - | hypothetical protein YPO0338 345570 - 345737 + | hypothetical protein TERM 364 347783 - 347762 - g 70 -2.9 -4.89567 | overlap 347763 347764 TTGGAAAATATAAAA TCGGCAGCA GAAA TGCTGCGTA GTCACCCTATAATGT YPO0339 345752 - 348322 + | enhancing factor (viral) TERM 365 348744 - 348725 - T 100 -11.4 -4.84527 | opp_overlap 348724 348725 TCCAGATACGAAAAA GCCCCGCT TTGC AGCGAGGC CTTATAAATAATGGT TERM 366 348789 - 348805 + T 76 -10.9 -2.62616 | opp_overlap 348788 348786 348783 TCGAACCAAGGACAC GGGGATT TTC AATCCCC TGCTCTACCGACTGA YPO0341 349551 - 348976 - | putative transcriptional regulator TERM 367 349644 - 349654 + H 71 -8.2 -3.42621 | opp_overlap 349632 ATAGCCCTATCTTTA CGGG CAC CCCG TTGTCGGTTGACGTT TERM 368 350099 - 350081 - g 77 -11.8 -3.14126 | opp_overlap 350080, overlap 350073 TGATAAACCGGAATA TTTCACCC CAC GGGTGAAA GTATTCAAAGGCGAT TERM 369 350412 - 350398 - g 71 -7.1 -4.25104 | CTGCCTGTATTAAAA CCTGC CCTAC GCAGG CTCTGACCTTGGTGG TERM 370 350478 - 350462 - g 83 -9.4 -4.35461 | overlap 350471 TCAACAGCAGCAAAA GCGCCA ACACA TGGCGC TGAATGAGCACAATG TERM 371 350560 - 350548 - g 76 -5.5 -4.87803 | CATCGTCAAATAAAA GCATC CGC GACGC AACACCGGTTAACCT YPO0342 349971 - 351986 + | putative oxidoreductase Fe-S binding subunit hydN 352009 - 352566 + | 4Fe-4S ferrodoxin YPO0344 352589 - 354736 + | formate dehydrogenase H TERM 372 354754 - 354796 + T 100 -8.3 -4.77173 | overlap 354756 TGTCGTGATTGAGCG TTGATTATGCCACGGCGAG ACCTA CTCGCCGTGGCGACAGCTA TTTATTTTGTAACCG TERM 373 354756 - 354794 + T 90 -10.9 -3.99938 | overlap 354754 TCGTGATTGAGCGTT GATTATGCCACGGCGAG ACCTA CTCGCCGTGGCGACAGC TATTTATTTTGTAAC dipZ 356585 - 354798 - | thiol:disulfide interchange protein precursor YPO0346 356920 - 356561 - | divalent-cation tolerance protein CutA TERM 374 356699 - 356734 + g 73 -9.2 -3.75629 | gap 1 ATGGTCAGTATTGCT CTTGAACAAGAG-CTGA ACC TCATACTCTTGTTCGAG TTTACCTTCCCAGTA TERM 375 357026 - 357013 - R 71 -9.5 -2.91126 | overlap 357008 ACAAATCATACTATA CCCCG AAGC CGGGG CCAGTCAGAAGATGA TERM 376 357101 - 357070 - R 77 -10.2 -3.18511 | gap 1, overlap 357074 GAGAGATAGACCGAA GT-TATTGGGGCGCA TGA TGCGCCCCATCAGAC AGATTACAGAACCAG TERM 377 357096 - 357074 - R 91 -13.4 -2.56571 | overlap 357070 GATAGACCGAAGTTA TTGGGGCGCA TGA TGCGCCCCAT CAGACAGATTACAGA dcuA 358406 - 357105 - | anaerobic C4-dicarboxylate transporter TERM 378 358501 - 358473 - R 100 -10.4 -5.04601 | gap 2, opp_overlap 358477 GCCAGAAAGTAAAAA GGCACGC-TG-TCC AGA GGAGCATGCGTGCC TTAGAGGGCTACCGA aspA 359962 - 358526 - | aspartate ammonia-lyase fxsA 360410 - 360988 + | FxsA groES 361243 - 361536 + | co-chaperonin GroES TERM 379 362214 - 362204 - g 71 -6.8 -4.25056 | opp_overlap 362203 TACTTCATCAATAAA CCAG AAA CTGG CTCTATTGAACTTGA groEL 361583 - 363229 + | chaperonin GroEL TERM 380 363306 - 363337 + F 100 -16.8 -4.38154 | opp_overlap 363298 363311, overlap 363311 AGGTAAAGCTGTTGA TAAAAGCGAGTAGG GTGA CCTGCTCGCTTTTA TTTTGTGAAGACTGT TERM 381 363332 - 363311 - f 93 -10.1 -4.37658 | opp_overlap 363306 363311, overlap 363298 AAGCTGTTGATAAAA GCGAGTAGG GTGA CCTGCTCGC TTTTATTTTGTGAAG TERM 382 363311 - 363332 + F 100 -12.3 -5.18371 | opp_overlap 363298 363311, overlap 363306 AAGCTGTTGATAAAA GCGAGTAGG GTGA CCTGCTCGC TTTTATTTTGTGAAG YPO0352 363865 - 364251 + | putative lipoprotein YPO0353 365564 - 364536 - | hypothetical protein TERM 383 365708 - 365693 - g 76 -8.2 -4.1466 | opp_overlap 365693 365692 365695 AGCGAATTCGTAAAA CCCGGC AAAG GCCAGG CTTTTGCGCGTGTTA efp 365600 - 366166 + | elongation factor P TERM 384 366525 - 366539 + G 80 -4.2 -5.09762 | TTATTACCCTCGTCG CAATGG CTG CCAGTG TTTTTCTATTGGCCT sugE 366413 - 366727 + | quaternary ammonium compound-resistance protein SugE TERM 385 366868 - 366844 - T 93 -9.9 -4.3255 | opp_overlap 366847, overlap 366846 366847 GCTTTAACCAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCATATGCGCCTAT TERM 386 366866 - 366846 - T 100 -12.5 -3.7642 | opp_overlap 366847, overlap 366844 366847 TTTAACCAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 387 366865 - 366847 - T 100 -16 -2.85129 | opp_overlap 366847, overlap 366846 366844 TTAACCAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 388 366847 - 366865 + T 100 -16 -4.8048 | opp_overlap 366847 366846 366844 TTAACCAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC tnp 367404 - 366946 - | transposase for the IS1541 insertion element TERM 389 367535 - 367517 - R 100 -16 -3.07307 | opp_overlap 367517 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 390 367517 - 367535 + r 100 -16 -4.36914 | opp_overlap 367517 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 391 367576 - 367554 - R 100 -13.4 -4.06419 | TCTGGGCACAAAGAA CGGCCTGCCA GAA CAGCAGGCCG CGAATATGGCATGTG frdD 367958 - 367602 - | fumarate reductase subunit D frdC 368367 - 367975 - | fumarate reductase subunit C TERM 392 368308 - 368297 - G 74 -2.2 -5.10064 | overlap 368298 368306 CGCAACATATAAAAA CGGT AGAA ACCA AGCTGTTGCCACCAG frdB 369118 - 368384 - | fumarate reductase iron-sulfur subunit frdA 370934 - 369111 - | fumarate reductase flavoprotein subunit YPO0361 371041 - 371232 + | hypothetical protein YPO0362 371392 - 372369 + | lysyl-tRNA synthetase TERM 393 372466 - 372440 - T 82 -5.9 -4.97405 | gap 1, opp_overlap 372442 372445, overlap 372442 ACTTACAAAAACAAA TACCCTG-ACCT GTGA AGGCGCAGGGCA TTTTTATTTCTTACT TERM 394 372445 - 372466 + T 91 -6.5 -5.48514 | opp_overlap 372442 372440, overlap 372442 CAAAAACAAATACCC TGACCTGTG AAGG CGCAGGGCA TTTTTATTTCTTACT YPO0363 375849 - 372490 - | hypothetical protein TERM 395 373573 - 373600 + g 71 -11.3 -2.71364 | gap 1, opp_overlap 373590 TTCCTCACCACGGGC GCGCTGCGC-GA GAATA TCGGCGCGGCGC TGCTTGGCGCGATCA TERM 396 374025 - 374015 - G 70 -4.6 -4.65838 | opp_overlap 374019, overlap 374019 GACAGACGGTAAAAA CGCA TTG CGCG CGCAACTTGTGTTGG TERM 397 375162 - 375172 + g 76 -4.6 -5.04175 | overlap 375161 GCTGAGCCTGAACCC GTGC TTC GCGC TTTTTGTATAATTCG psd 376754 - 375873 - | phosphatidylserine decarboxylase TERM 398 376817 - 376789 - R 70 -5.8 -4.38141 | overlap 376791 CGTTAGATAAAATAA GGGGGCGCATTG TATCG CTCTGCGCCCAC CCTGTCAGACCCTTC YPO0365 378131 - 377079 - | ribosome-associated GTPase TERM 399 378843 - 378860 + G 76 -6.3 -4.71776 | GTCAGTCGCCGAGCT TGCTTAC TATC GTGAGCA TTTTATTCAATCTTA orn 378331 - 378876 + | oligoribonuclease TERM 400 379400 - 379385 - Tf 70 -7.6 -3.73647 | CGTACCGATGAAGAA TTCGCA AGCA TGCGAA GACAGATTTAGTACA TERM 401 379476 - 379460 - Tf 76 -10.9 -2.62616 | TCAGTTGGTAGAGCA CGACCTT GCC AAGGTCG GGGTCGCGAGTTCGA TERM 402 379736 - 379755 + TF 84 -2.9 -5.69262 | gap 1 ACTTGTGCTTTTTTT TGCACTTG ATTGC CAAG-GCA TTTTTATTTTTATGC YPO0367 381056 - 379821 - | putative iron-sulfur cluster-binding protein TERM 403 380758 - 380775 + gF 75 -8.5 -3.86202 | opp_overlap 380761, overlap 380761 GCATAGCGGCTGACA TAACCCA ATTC TGGGTTA TTTAATGTACTGGCA TERM 404 380884 - 380902 + gF 82 -10.3 -3.59087 | GCACGCAGCATACCG TGGCGTG CCATC CACGCCA TTTCGCCATGATATT TERM 405 380980 - 380962 - Gf 71 -8.2 -3.53012 | opp_overlap 380961 TCTTCCGCCGTCAAA TCGGTATC GCA AATACCGA CTTGCTGGAAACCTA TERM 406 382111 - 382099 - gH 80 -9.1 -3.97602 | CAACAGAGTGATAAA CCCAC CTT GTGGG ATGCGGATGCACTTA YPO0368 381055 - 382569 + | hypothetical protein YPO0369 382580 - 383050 + | putative ATPase TERM 407 383478 - 383464 - g 71 -5.7 -4.36433 | CGAAAGATGAACAAA GTACC CGCCT GGTAC TGGAACTGACGCAGA TERM 408 383527 - 383503 - g 73 -2.8 -5.04601 | gap 1 CGCAGAAAGTAAAAA CCCGTGCTGTC ACCC AACAGT-CGGG CAATAACTACACGGT TERM 409 384774 - 384760 - g 71 -11.4 -2.72511 | overlap 384759 GCCAGCGGTTGAAAG TGCCCG CGT CGGGCA GTACGGTAACGGCAG YPO0370 383190 - 384971 + | putative N-acetylmuramoyl-L-alanine amidase-family protein mutL 384987 - 386894 + | DNA mismatch repair protein TERM 410 387388 - 387406 + G 100 -3.9 -6.23545 | gap 1, opp_overlap 387387 387386, overlap 387391 AATGATCCCCAAAGG CTCTCCAG AGCA CTGGA-AG TTTTTTTTATTTCAG miaA 386887 - 387828 + | tRNA delta(2)-isopentenylpyrophosphate transferase hfq 387944 - 388249 + | RNA-binding protein Hfq hflX 388348 - 389634 + | putative GTPase HflX TERM 411 390044 - 390031 - g 74 -2.3 -5.19261 | AAACTGAGCAAAAAA CTGAG TAGC CTCGG TGGCAAAGGTAGCGG hflK 389875 - 391134 + | FtsH protease regulator HflK hflC 391138 - 392142 + | FtsH protease regulator HflC TERM 412 392256 - 392274 + F 95 -9.5 -4.43213 | TGAACGTAACACCGA GGCCCGT CTAGT GCGGGCC TTTTCATGTGTTGAA YPO0377 392314 - 392514 + | hypothetical protein TERM 413 392984 - 392974 - g 76 -6.8 -4.57341 | AATGCGCGTGAAAAA GCAC GTG GTGC AAAAGCTATCGGTAC TERM 414 393126 - 393103 - g 80 -10.4 -3.67976 | opp_overlap 393119, overlap 393107 393120 GCTATCAAGCTGAAA GAAATTGTGG AATA CCACAACTTC CAGTTGGTGCATTAC TERM 415 393122 - 393107 - g 79 -7.6 -4.46233 | opp_overlap 393119, overlap 393103 393120 TCAAGCTGAAAGAAA TTGTGG AATA CCACAA CTTCCAGTTGGTGCA purA 392614 - 393912 + | adenylosuccinate synthetase TERM 416 393999 - 394028 + F 100 -15.9 -2.80816 | opp_overlap 393999 394002 394006, overlap 394002 394006 TATTTGTGTTCGAAA CAATAAACCGGGC TGAT GTCCGGTTTATTG TCTAATACATCCAGC TERM 417 394028 - 393999 - f 100 -13.7 -3.53224 | opp_overlap 393999 394002 394006, overlap 394002 394006 TATTTGTGTTCGAAA CAATAAACCGGGC TGAT GTCCGGTTTATTG TCTAATACATCCAGC TERM 418 394002 - 394025 + F 91 -11.8 -3.55447 | opp_overlap 393999 394002 394006, overlap 393999 394006 TTGTGTTCGAAACAA TAAACCGGGC TGAT GTCCGGTTTA TTGTCTAATACATCC TERM 419 394025 - 394002 - f 81 -9.6 -3.90744 | opp_overlap 394002 393999 394006, overlap 393999 394006 TTGTGTTCGAAACAA TAAACCGGGC TGAT GTCCGGTTTA TTGTCTAATACATCC TERM 420 394006 - 394021 + F 87 -8.2 -4.41114 | opp_overlap 394002 393999 394006, overlap 394002 393999 GTTCGAAACAATAAA CCGGGC TGAT GTCCGG TTTATTGTCTAATAC TERM 421 394021 - 394006 - f 73 -6 -4.56978 | opp_overlap 394006 394002 393999, overlap 394002 393999 GTTCGAAACAATAAA CCGGGC TGAT GTCCGG TTTATTGTCTAATAC TERM 422 394676 - 394707 + G 86 -5.1 -5.30155 | overlap 394680 GGTTAAAGATAATTC CCCGCTCTACAAG CTATTA CTTGTTGAGTAGG TTTTTTACTTAATAA YPO0379 394281 - 394706 + | transcriptional repressor NsrR TERM 423 396350 - 396361 + G 76 -7.2 -4.36914 | opp_overlap 396349 GATTCTGGCGAATAT CGCG GCGG CGCG TTTTGTGGAAAAACA TERM 424 397292 - 397278 - g 91 -9.2 -4.82901 | GCGGGTGGACAAAAA CGCCCA CGT CGGGCG AAAAAACCGGTAAAC rnr 394947 - 397481 + | exoribonuclease R TERM 425 397515 - 397539 + F 74 -10 -3.08072 | gap 1 TGGTGGTGTGCTACT TGCCGGGCGGC TTTT GTCGCCCG-CA TATAATTTAATTATT YPO0381 397600 - 398340 + | 23S rRNA (guanosine-2'-O-)-methyltransferase TERM 426 398418 - 398397 - f 75 -8.8 -3.60098 | ACTCCGCAGCCTAAA GCCAACAT CTTTGT ATGTTGGC TCAGACTGCTGACAA TERM 427 398507 - 398481 - f 84 -10.1 -3.82218 | gap 1, opp_overlap 398490, overlap 398482 398497 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 428 398508 - 398482 - f 72 -10.1 -2.88849 | gap 1, opp_overlap 398490, overlap 398481 398497 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT TERM 429 398587 - 398608 + F 71 -3 -5.08088 | opp_overlap 398588, overlap 398588 TGTCAATAACCTCAA ACCAACAT CTTTGT ATGTTGGC TTTTTGTTGGGAATT aidB 398748 - 400391 + | isovaleryl CoA dehydrogenase YPO0384 400774 - 400463 - | putative lipoprotein YPO0385 401896 - 401114 - | transposase/IS protein TERM 430 401812 - 401826 + g 77 -11.4 -3.3506 | overlap 401825 CTGCCTGTTGTGACA GCGCAG GCG CTGCGC TTATAAGGCTTTCCA y1093 402915 - 401893 - | transposase for insertion sequence IS100 TERM 431 402937 - 402919 - H 100 -13.2 -4.01078 | AAAAGTGACCATAAA CTCTCCTG AAT CAGGAGAG CAGATTACCCCCTGG TERM 432 403129 - 403116 - g 70 -9.5 -3.25762 | overlap 403114 AAAATAATCAATACA GCCCC GACT GGGGC AAACACTATCGTCAG TERM 433 404918 - 404907 - g 79 -7.2 -4.58466 | GCGACAATCAGAAAA GCGG AAAC CCGC AGCTACAGTTCGTGT YPO0387 403049 - 405112 + | hypothetical protein YPO0388 405109 - 406425 + | hypothetical protein TERM 434 406638 - 406653 + G 100 -6.8 -5.81412 | opp_overlap 406638 TAGTATGAAAATTAA GTCACC GCAA GGTGGC TTTTTTTTGCCTAAA YPO0389 406492 - 406722 + | hypothetical protein YPO0390 406969 - 407436 + | hypothetical protein TERM 435 407557 - 407546 - g 70 -4.4 -4.7254 | AGGGGCGAGCAAAAA GACA ATAC TGTC ATGCTTTGATTCAAT TERM 436 408733 - 408723 - g 73 -5.4 -4.73388 | overlap 408725 AATGGCGATGAAAAA TAGC ATT GCTA ATACGATGGATAAAG YPO0391 407449 - 408774 + | modification methylase TERM 437 409002 - 408987 - g 71 -7.6 -4.04188 | opp_overlap 408990 AGTTAAAGATAATAA TTTCCG ATTA CGGAAA CGGTATGTCGGTAGA YPO0392 408824 - 409546 + | hypothetical protein YPO0393 409656 - 410891 + | hypothetical protein YPO0394 411522 - 411235 - | hypothetical protein TERM 438 411614 - 411604 - H 71 -6.8 -4.12188 | opp_overlap 411603, overlap 411611 TTACTACTCTGAAAA CGAG AAT CTCG CCTGTTTTCCGGCGG TERM 439 411693 - 411711 + H 70 -8 -3.64487 | CCTGCGTGGGCAGTT CCTTCCGC CGT GCGGGTGG TTCTTACCAGTGTCA YPO0395 411962 - 412054 + | transposase (partial) YPO0396 412139 - 413551 + | hypothetical protein YPO0397 413548 - 414702 + | hypothetical protein YPO0398 415894 - 414848 - | M48 peptidase family protein YPO0399 417101 - 415905 - | hypothetical protein YPO0400 417807 - 418343 + | hypothetical protein TERM 440 418392 - 418373 - g 77 -13.6 -2.55544 | opp_overlap 418371 418369, overlap 418369 TTATCAGTCAACTGA CGGCTCTG GTAT CAGAGCCG AATAGTATTCACCAT YPO0401 418345 - 419220 + | putative transcriptional regulator YPO0402 419557 - 419213 - | putative fructose-like phosphotransferase EIIB subunit 3 YPO0403 419970 - 419650 - | putative fructose-like phosphotransferase EIIB subunit 2 TERM 441 420093 - 420072 - R 95 -13.1 -3.15544 | overlap 420057 GCTCATCGGGACTAA TGAGCCTCA TCCT TGAGGCTCA CCCTGCGGGCTAGCA YPO0404 421396 - 420311 - | putative fructose-like permease EIIC subunit 2 TERM 442 421589 - 421576 - H 78 -5.3 -4.91511 | ATGTCATCAGAAAAA TGAGA GCCA TCTCA ACTTCCCGGCAATGA TERM 443 424009 - 424023 + G 76 -4.2 -5.05782 | TGGCTGCGGATGTGT GGGC GCGAGAA GCCC TTTTTTCCACTGGAT YPO0405 421758 - 424316 + | putative phosphoenolpyruvate-protein phosphotransferase YPO0406 424869 - 424378 - | hypothetical protein YPO0407 425460 - 425170 - | autoinducer-2 (AI-2) modifying protein LsrG YPO0408 426399 - 425524 - | aldolase TERM 444 425996 - 425976 - G 78 -12.5 -3.0094 | CCGTACCGATATACA CCTGTGCGG CGA CCGCGCAGG CATTGAGCCGTACAG TERM 445 426288 - 426273 - G 71 -5.4 -4.56597 | gap 1, opp_overlap 426273, overlap 426274 TTTTCGGGTTAAAAA TCCGCGC CAG GCG-GGA TTGCATTCCCCAATC YPO0409 427474 - 426455 - | putative periplasmic solute-binding protein YPO0410 428541 - 427540 - | putative ABC transporter permease protein YPO0411 429593 - 428538 - | putative ABC transporter permease protein YPO0412 431170 - 429587 - | putative ABC transporter ATP-binding protein TERM 446 430150 - 430167 + g 79 -9.1 -4.26076 | opp_overlap 430145, overlap 430162 AATACACTAAGCCCG CCGCCAG GCGA TTGGCGG TTTTCATCGCCGTGA YPO0413 431591 - 431280 - | hypothetical protein YPO0415 432673 - 434265 + | autoinducer-2 (AI-2) kinase TERM 447 434383 - 434349 - f 100 -10.7 -4.29928 | gap 1, opp_overlap 434366 AATTAATAGCGAAAA GCGGCCAGC-TTGCGC TTCG GGGCAATGCTCGCCGC CGTCACGTGCTGCGT TERM 448 434958 - 434922 - g 70 -8 -3.79747 | overlap 434944 GCATGCAGGATTAAA GGCGCAAATCAGTG GCGAAAAAG CACTGTTTAGCGCC CTAAAAAAACAACAT TERM 449 435014 - 435026 + G 71 -6.9 -4.15044 | ATCAATGGCGGGCTG CGGCG TAT TGCCG TTTGTTAAAACCCAC YPO0416 434734 - 435774 + | putative lipopolysaccharide core biosynthesis protein TERM 450 435924 - 435942 + G 70 -4.6 -4.59414 | CCAACGAATAATCAG CTAATGAG TGT TTCATTGG TTTTGATTATTATCA TERM 451 436655 - 436666 + G 73 -5.8 -4.5442 | TAATTCCTCCATGGG GCAG CGTT CTGC TTTTGTGGTTGAAGC YPO0417 435822 - 437054 + | putative O-antigen biosynthesis protein TERM 452 437163 - 437137 - f 70 -7.2 -3.74872 | gap 1, opp_overlap 437146, overlap 437138 AGGCAGGGGAGTAAA GCGTCCGCGCC AGGGAG GGCGCGG-CTC GAGCCTACATGGATA TERM 453 437264 - 437284 + F 100 -14 -3.67976 | TTTTTTGTTTAGCCG CGGCACCC TTTAT GGGTGCCG TTTAACGTTAATGGC YPO0418 437640 - 437837 + | hypothetical protein YPO0419 437864 - 438097 + | hypothetical protein YPO0420 438149 - 439231 + | putative lipoprotein TERM 454 440728 - 440716 - g 79 -5.5 -4.93365 | TTCCAGAACCAAAAA CAGCC TGA AGCTG ATGCGGATAAGCCGG TERM 455 440765 - 440749 - g 70 -8.7 -3.56099 | opp_overlap 440749 440748 440739, overlap 440739 440752 GATAAGCCGGTTAAA CAACCGT ATG ACGGCTG GTTATTCCGCTATTA TERM 456 441041 - 441051 + G 74 -8.2 -3.9712 | CAACCATAGGTCAGG GCGC AAT GCGC TTTATGCTGACCTAC YPO0421 439231 - 442317 + | putative multi-drug efflux protein TERM 457 442357 - 442380 + T 100 -11 -5.75342 | TAAAAGTAATTTCAG CAGCCCCG GTCAGTCA CGGGGCTG TTTTTTTTGACGAAC YPO0422 443010 - 442678 - | hypothetical protein YPO0423 443504 - 443157 - | hypothetical protein YPO0424 443813 - 444898 + | putative pectinesterase hmsT 446611 - 445439 - | HmsT protein TERM 458 447100 - 447114 + G 83 -5.6 -5.1356 | AGCATGTTGTACCAC GTGCGG TTG CGGCAC TTTTTGTTACTGCCA YPO0426 446953 - 447192 + | hypothetical protein rsmC 448748 - 447705 - | 16S ribosomal RNA m2G1207 methyltransferase TERM 459 447829 - 447801 - G 77 -9.5 -3.72576 | TTCGTGGCTACCAAA TGCGGCATCCAGC AAG GCAGGATACGGCA GGAAGGAGTTCGCTA TERM 460 448642 - 448656 + g 70 -10 -3.24924 | opp_overlap 448641 448642, overlap 448640 CCGGCTGCATCAAAT TGCGCT GGC AGCGCA TCTTGTAAATCACCG TERM 461 449174 - 449191 + GH 75 -8.4 -3.87815 | opp_overlap 449167 449174 GTGCACAATTACATA GCCCAG AATTAG CTGGGC TTTATCAAGATGCGG holD 448861 - 449298 + | DNA polymerase III subunit psi TERM 462 449358 - 449334 - gf 80 -4.2 -5.09895 | CATGGACGGAAAAAA CGTTCGCC AGTAATCAG GGCGACCG GTACCTCAATTTTAA rimI 449243 - 449686 + | ribosomal-protein-alanine N-acetyltransferase TERM 463 449667 - 449691 + F 84 -3.6 -5.43329 | gap 2, opp_overlap 449656, overlap 449668 AAGATGCCATTATGA TGGCG-T-TGCC AAT GGCATAGCGCCG TTTTATTTTGTTTTT TERM 464 450083 - 450057 - g 82 -6.6 -4.81851 | opp_overlap 450068, overlap 450061 450062 ATGGAAATGGAAAAA CAACGCGGTA TCTCCAT TACCACGTCG GTAATGCAGTTTCCG TERM 465 450318 - 450294 - g 79 -9.3 -4.2461 | ACCTTTATGAACAAA TTGGACCGCGA AAT TCGTGATCCAA TGGAAGTTCTGGATG prfC 449865 - 451454 + | peptide chain release factor 3 osmY 451781 - 452395 + | periplasmic protein TERM 466 452513 - 452534 + F 72 -8 -3.82946 | opp_overlap 452513 452512 AGAGCCAAATGAAAG GGTGTCTG TTTAAT CAGGCACC TTATCTTTAAACTGG YPO0432 452562 - 452723 + | hypothetical protein YPO0433 452797 - 454068 + | hypothetical protein YPO0434 454105 - 454893 + | putative metalloenzyme TERM 467 455176 - 455150 - f 84 -10.1 -3.82218 | gap 1, opp_overlap 455159, overlap 455151 455166 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 468 455177 - 455151 - f 72 -10.1 -2.88849 | gap 1, opp_overlap 455159, overlap 455150 455166 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT YPO0435 455428 - 456699 + | putative Na+ dependent nucleoside transporter-family protein TERM 469 456730 - 456708 - f 83 -12.1 -2.61383 | opp_overlap 456707, overlap 456707 ACTGTGATGTATAAG GTGCCGTTT TTGTC AAACGGCAC ATGCTATCAGGCGTA TERM 470 456782 - 456756 - f 79 -11 -3.15544 | opp_overlap 456741 GCGTATTCTCACCAA TACGCTATTCTT GAT ACGAATAGCGTA ATCGGGGCCAATAGA TERM 471 456895 - 456880 - f 76 -7.6 -4.21439 | TAATGTGAAGATAAA CACATC TCAT GATGTG CTAACGTGCTCAAAT deoC 457275 - 458072 + | deoxyribose-phosphate aldolase deoB 459643 - 460866 + | phosphopentomutase deoD 460991 - 461710 + | purine nucleoside phosphorylase TERM 472 461748 - 461783 + T 79 -7.6 -4.31293 | overlap 461752 TCCAGCGGTTTTTTC TTTCTTCAGCGGTAGA GATC TCTGCCGCTGAATTGA TTTATTCCTCTCTGA TERM 473 461752 - 461779 + T 100 -15 -3.71527 | overlap 461748 GCGGTTTTTTCTTTC TTCAGCGGTAGA GATC TCTGCCGCTGAA TTGATTTATTCCTCT smp 462523 - 461822 - | hypothetical protein TERM 474 462563 - 462581 + H 73 -8.8 -3.51597 | overlap 462564 CCTGCATACTTGATG TTGCTGCG TGA CGCAGCGG TTCTGATTCACCCTT TERM 475 462564 - 462580 + H 71 -10.1 -2.70476 | overlap 462563 CTGCATACTTGATGT TGCTGCG TGA CGCAGCG GTTCTGATTCACCCT serB 462755 - 463735 + | phosphoserine phosphatase TERM 476 464612 - 464599 - g 76 -5.2 -4.87665 | GCGTAGCCACAAAAA CCGC TTTGGT GCGG TTAACGAACTGGGTG radA 463823 - 465205 + | DNA repair protein RadA TERM 477 465315 - 465328 + F 71 -4.5 -4.74052 | TAATAGTGCCAATCC CGCAG CATA CTGTG TTATTTTTGTTTAGT TERM 478 465422 - 465406 - g 73 -2.9 -4.93547 | overlap 465407 GCAATTAAGCAAAAA GGCTGCA CCT TACAGCA GGTGGCTGAGGCCAG nadR 465364 - 466635 + | nicotinamide-nucleotide adenylyltransferase TERM 479 466736 - 466708 - f 83 -11.9 -2.84634 | overlap 466711 466721 CTGGATATCATCACA TGAGCCGAATA TACTGGC TATTCGGCTCA CCAAATGAGCCGAAT TERM 480 466767 - 466711 - f 76 -10.9 -2.67992 | overlap 466708 466721 466742 GATATCATCACATGA GCCGAATATACTGGCTATTCGGCTCAC CAA ATGAGCCGAATAATGAGGCTAATCGGC TCACTCTCCGGTTGG TERM 481 466757 - 466721 - f 72 -9.5 -3.09289 | overlap 466708 466711 466742 CATGAGCCGAATATA CTGGCTATTCGGCTCAC CAA ATGAGCCGAATAATGAG GCTAATCGGCTCACT TERM 482 466770 - 466742 - f 73 -8.2 -3.72695 | overlap 466721 466711 ATTCGGCTCACCAAA TGAGCCGAATAA TGAGG CTAATCGGCTCA CTCTCCGGTTGGGAG YPO0445 466792 - 467922 + | hypothetical protein TERM 483 467920 - 467949 + T 70 -9.3 -2.88861 | opp_overlap 467926, overlap 467925 467926 GCGAAATACCCTGAC TAAAAAGGCCTGC GATT GCAGGCCCTTCTA TCTGTCAGGCTACTA TERM 484 467925 - 467944 + T 78 -9.2 -3.64198 | opp_overlap 467926, overlap 467920 467926 ATACCCTGACTAAAA AGGCCTGC GATT GCAGGCCC TTCTATCTGTCAGGC TERM 485 467926 - 467943 + T 89 -12.7 -2.78197 | opp_overlap 467926, overlap 467925 467920 TACCCTGACTAAAAA GGCCTGC GATT GCAGGCC CTTCTATCTGTCAGG TERM 486 467943 - 467926 - T 100 -12.7 -4.72986 | opp_overlap 467926 467925 467920 TACCCTGACTAAAAA GGCCTGC GATT GCAGGCC CTTCTATCTGTCAGG TERM 487 468966 - 468980 + T 85 -2.1 -5.7946 | gap 1 TCAGAAGAGGCTTCT TGCGCC AGAC GG-GCA TTTTTTTGTTCCAGC TERM 488 469900 - 469879 - T 90 -10.9 -4.05926 | GAATAAAGGCAGAAA CCGGTTTAC AGCC GCAAACCGG TAAATAAAGGACGTT YPO0448 470420 - 469914 - | putative lipoprotein YPO0449 471703 - 470426 - | hypothetical protein TERM 489 471369 - 471401 + g 78 -10 -3.90766 | TGATGGATAGGCCCA TCGTCAGGTAGC GCCCAGTAA GCTATCTGACGA TTATGTTTATCAATG TERM 490 471506 - 471493 - G 70 -3.1 -4.77036 | gap 1 CGTTATCACCAAAAA CGACGG CGG CC-TCG GTGGTATAACTGATG YPO0450 472347 - 471724 - | hypothetical protein TERM 491 472464 - 472484 + r 72 -6.3 -4.34263 | overlap 472458 472462 472474 472476 ATATCATCGTAAATT TGAGATTTA TCT TAAATCTTA TTTATGTTATTGAAA TERM 492 472531 - 472515 - R 84 -2.9 -5.59879 | opp_overlap 472515 TAGAAATATAAAAAA CCCGA CTGTTTT CCGGG TTTTTGTCAGGTAGT TERM 493 472671 - 472701 + r 100 -15.4 -5.1523 | opp_overlap 472650 472671 TTATTTACCTCAAAA GCCCCGGAGCTG GGCTGGA CTGCTCCGGGGC TTTTTCTCTTCTGAC TERM 494 472701 - 472671 - R 100 -15.4 -4.14739 | opp_overlap 472671, overlap 472650 TTATTTACCTCAAAA GCCCCGGAGCTG GGCTGGA CTGCTCCGGGGC TTTTTCTCTTCTGAC YPO0451 475448 - 472722 - | putative cation-transporting P-type ATPase TERM 495 475308 - 475325 + g 70 -3.3 -4.7629 | overlap 475304 475310 GGGACCATATTGCGC CAGGCGC TCTT GTGCCTC TTTTTGGCTTAATCC slt 476018 - 477937 + | lytic murein transglycosylase trpR 478188 - 478565 + | Trp operon repressor YPO0454 479104 - 478562 - | NTPase TERM 496 479129 - 479159 + H 71 -4.8 -4.65512 | opp_overlap 479129 479128, overlap 479124 GAATATCCTTTAAAG CCTATCTAAAATAG GTT TTATCTCAGATAGG TTTTGTGCTTATTTT gpmB 479198 - 479845 + | phosphoglycerate mutase rob 480708 - 479842 - | putative right origin-binding protein creA 480934 - 481401 + | hypothetical protein TERM 497 481528 - 481551 + T 70 -7.4 -3.76607 | opp_overlap 481530, overlap 481530 GATATAAAAACAAAA AAGCCAGCAT CTGT GTGCTGGCTC TTTCCGTCTCTATTC TERM 498 481549 - 481530 - T 100 -9.3 -5.98675 | opp_overlap 481530 481528 TATAAAAACAAAAAA GCCAGCA TCTGTG TGCTGGC TCTTTCCGTCTCTAT TERM 499 481530 - 481549 + T 78 -10 -3.45632 | opp_overlap 481530, overlap 481528 TATAAAAACAAAAAA GCCAGCAT CTGT GTGCTGGC TCTTTCCGTCTCTAT arcA 482291 - 481575 - | two-component response regulator TERM 500 483302 - 483324 + H 100 -12 -6.11644 | opp_overlap 483302 AAACAATAGAAAAAA GCCCGCAC CTAGACA GTGCGGGC TTTTTTTTTCAATCA TERM 501 483324 - 483302 - H 100 -12.7 -5.57729 | opp_overlap 483302 AAACAATAGAAAAAA GCCCGCACC TAGAC AGTGCGGGC TTTTTTTTTCAATCA thrA 483395 - 485854 + | bifunctional aspartokinase I/homeserine dehydrogenase I TERM 502 486137 - 486158 + G 71 -10.9 -3.13164 | gap 1 ATATGCCGATCGGTT CAGG-GCTGG GTT CCAGCGCCTG TTCAGTGGTTGCCGG thrB 485857 - 486786 + | homoserine kinase TERM 503 486956 - 486971 + G 73 -5.4 -4.73613 | gap 1 TTGTGACCCGTAGTA GCCG-CA TTC TGTCGGC TTTTATTGGTAGTGA TERM 504 488027 - 488055 + G 70 -4.6 -4.74801 | TGCTATCCCATGATT TGCCCGCA GACTTTGCACAAA TGCGGGCA TTTTTGATGGCATTG thrC 486790 - 488079 + | threonine synthase YPO0462 489672 - 488896 - | hypothetical protein TERM 505 490866 - 490849 - g 100 -7 -5.32882 | CAGTACTACAAAAAA CACGGT TATAAG ACCGTG GTGATGGGTGCAAGC talB 490204 - 491157 + | transaldolase B TERM 506 491200 - 491215 + F 100 -10.4 -5.45652 | opp_overlap 491200 TCGGTATCTGAATGA GGTGGC GCAA GCCACC TTTTTTATTGCCGAT TERM 507 491215 - 491200 - f 74 -10.4 -2.73364 | opp_overlap 491200 TCGGTATCTGAATGA GGTGGC GCAA GCCACC TTTTTTATTGCCGAT mogA 491445 - 492032 + | molybdenum cofactor biosynthesis protein TERM 508 493190 - 493200 + G 74 -6.8 -4.37092 | TGATGCTGGCGATGT CGAC ATG GTCG TTTTATCACACCAAT TERM 509 493355 - 493366 + G 78 -5.8 -4.84363 | opp_overlap 493354 CTTTCTCGTACAATG TGGC CTAT GCCA TTTTTGGTGGTTTAA YPO0465 492160 - 493548 + | putative transport protein TERM 510 493561 - 493603 + T 78 -5.3 -5.04597 | gap 2, opp_overlap 493567, overlap 493562 493567 TAAGTCAATTCACTT TA-AAAAGCCCATAA-TTATT ATC AATAAATTATGGGCTTTTATC TTTTTCTCTATACCT TERM 511 493562 - 493601 + T 91 -10.4 -4.14422 | gap 1, opp_overlap 493567, overlap 493561 493567 AAGTCAATTCACTTT AAAAAGCCCATAA-TTATT ATC AATAAATTATGGGCTTTTA TCTTTTTCTCTATAC TERM 512 493567 - 493596 + T 100 -10.3 -5.02287 | gap 1, opp_overlap 493567, overlap 493562 493561 AATTCACTTTAAAAA GCCCATAA-TTATT ATC AATAAATTATGGGC TTTTATCTTTTTCTC TERM 513 493596 - 493567 - T 100 -10.3 -4.63184 | gap 1, opp_overlap 493567 493562 493561 AATTCACTTTAAAAA GCCCATAA-TTATT ATC AATAAATTATGGGC TTTTATCTTTTTCTC YPO0466 496065 - 493618 - | hypothetical protein TERM 514 495772 - 495799 + g 80 -2.1 -5.48163 | gap 1, opp_overlap 495772 ATTATATAGTCCAAA TGATTTCATACC GTCTA GGT-TGACATCA TTTTTTAATTTCTTT TERM 515 496321 - 496283 - R 100 -20 -4.55798 | opp_overlap 496283 GAGTGGAAAGTAAAA GCACCTTGAATATTAAAT TTT ATCTAATATTCAAGGTGC TGTGTAATATAAGCT TERM 516 496283 - 496321 + r 100 -17.8 -2.97925 | opp_overlap 496283 GAGTGGAAAGTAAAA GCACCTTGAATATTAAAT TTT ATCTAATATTCAAGGTGC TGTGTAATATAAGCT yaaH 496965 - 496354 - | hypothetical protein TERM 517 496771 - 496785 + g 90 -5.7 -5.31275 | opp_overlap 496762 GGTAAATGCGGTGGC GGCAA ATGTG TTGCC TTTTTTATACTCCAA TERM 518 496891 - 496877 - G 71 -7.1 -4.16842 | opp_overlap 496877 CTCAGTGGGAAGAAA CCTGC GTTGT GCAGG TTTAGCAAGACGGTA TERM 519 496938 - 496926 - G 75 -10.5 -3.39668 | overlap 496918 TCCCAAAGCCCATAA GGCCC AAT GGGCC AGGATTCGCCAACTT TERM 520 497677 - 497667 - g 74 -2.4 -5.12707 | overlap 497658 497668 497669 TTAAAGGCCAAAAAA TGGC ACC GCCG CAGATCTCTGCTGAA dnaK 497339 - 499249 + | chaperone protein DnaK TERM 521 499335 - 499298 - f 100 -15.5 -3.53224 | opp_overlap 499296, overlap 499301 TACTGTTGCTGGAAA CCAGCACGGGCGTCGAG GAAA CTCTACGCCCGTGCACG CATGTTAAGGGTAGG TERM 522 499332 - 499301 - f 100 -20.2 -2.90496 | opp_overlap 499296, overlap 499298 TGTTGCTGGAAACCA GCACGGGCGTCGAG GAAA CTCTACGCCCGTGC ACGCATGTTAAGGGT TERM 523 500450 - 500437 - g 83 -3.1 -5.40072 | TGCTGGTGAAAAAAA TAGCC CGCG AGCTA AAAGTTTCTTAGATG dnaJ 499361 - 500500 + | chaperone protein DnaJ TERM 524 500540 - 500581 + F 74 -9.7 -3.12803 | opp_overlap 500542 500551, overlap 500542 500551 500576 CAGCTAATAAAGTAA AATGAAAGAAATCCTCGGT TGAT ATCGAGGATTTTTTTTATC TGTTGAATATGGATA TERM 525 500579 - 500542 - f 75 -5.7 -4.67942 | opp_overlap 500540 500542 500551 500576, overlap 500551 GCTAATAAAGTAAAA TGAAAGAAATCCTCGGT TGAT ATCGAGGATTTTTTTTA TCTGTTGAATATGGA TERM 526 500542 - 500579 + F 93 -12.3 -3.12142 | opp_overlap 500542 500551, overlap 500540 500551 500576 GCTAATAAAGTAAAA TGAAAGAAATCCTCGGT TGAT ATCGAGGATTTTTTTTA TCTGTTGAATATGGA TERM 527 500570 - 500551 - f 77 -6.4 -4.67692 | opp_overlap 500542 500540 500551, overlap 500542 GTAAAATGAAAGAAA TCCTCGGT TGAT ATCGAGGA TTTTTTTTATCTGTT TERM 528 500551 - 500570 + F 100 -8.6 -6.08563 | opp_overlap 500551 500542, overlap 500542 500540 GTAAAATGAAAGAAA TCCTCGGT TGAT ATCGAGGA TTTTTTTTATCTGTT ant 500743 - 501927 + | sodium-proton antiporter TERM 529 501951 - 501980 + F 100 -13.7 -3.2048 | CACGTTATTGATTCA GCATTGCTGCC CAAGCGCA GGCAGCAATGC TTGGTGGAATTTAAA nhaR 502057 - 502956 + | transcriptional activator NhaR TERM 530 503065 - 503036 - T 100 -14.5 -3.08344 | opp_overlap 503042 503044, overlap 503044 GCCAAACGATAGAGA TAAAAAAACCGGC CTAA GCCGGTCTTTTTA CAAGCACTCAATGTC TERM 531 503042 - 503059 + T 76 -6.9 -4.57073 | opp_overlap 503036 503044, overlap 503044 CGATAGAGATAAAAA AACCGGC CTAA GCCGGTC TTTTTACAAGCACTC TERM 532 503057 - 503044 - T 100 -9.5 -5.77988 | opp_overlap 503044 503042, overlap 503036 ATAGAGATAAAAAAA CCGGC CTAA GCCGG TCTTTTTACAAGCAC TERM 533 503044 - 503057 + T 81 -9.5 -3.90048 | opp_overlap 503036 503044, overlap 503042 ATAGAGATAAAAAAA CCGGC CTAA GCCGG TCTTTTTACAAGCAC rpsT 503350 - 503087 - | 30S ribosomal protein S20 TERM 534 503188 - 503203 + g 76 -6.2 -4.62783 | GATCCACGATTGGTT GCATTT CATT AAATGC TTTTTGCGCTGCGTC YPO0473 503548 - 503372 - | hypothetical protein TERM 535 504141 - 504168 + G 88 -10.6 -4.15565 | gap 1 CGGTAGGTGATGACT TCCGCTTTGGCGC AGG GCGCCAGGG-GGA TTTTCAACTACTGCA ribF 503765 - 504703 + | bifunctional riboflavin kinase/FMN adenylyltransferase ileS 504735 - 507551 + | isoleucyl-tRNA synthetase TERM 536 507661 - 507681 + G 76 -4.7 -5.03314 | overlap 507662 CCACTTTGCTCTGTA TGAATCGGT GCC ACTGATTCC TTTTTTCAACCTAAC lspA 507551 - 508060 + | lipoprotein signal peptidase YPO0476a 508128 - 508586 + | FKBP-type peptidyl-prolyl cis-trans isomerase ispH 508567 - 509520 + | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase TERM 537 509597 - 509580 - g 70 -8.4 -3.767 | opp_overlap 509575 TATTTACTGACGAAA GCAGCC CTTTGC GGCTGC TTGAGGTTATTGATA YPO0478 509549 - 509713 + | hypothetical protein TERM 538 509732 - 509749 + F 100 -8.4 -5.55769 | overlap 509725 TGTCAGCAGTCTGAA GCAGCC CTTTGT GGCTGC TTTTTTATTGTGCCC TERM 539 509771 - 509789 + F 100 -16 -3.07307 | opp_overlap 509771 ATTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC TERM 540 509789 - 509771 - f 100 -16 -4.37092 | opp_overlap 509771 ATTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC tnp 509902 - 510360 + | transposase for the IS1541 insertion element TERM 541 510438 - 510462 + F 100 -9.9 -4.44046 | opp_overlap 510441, overlap 510440 510441 ATAGGCGCATATGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTTGGGGTAAG TERM 542 510440 - 510460 + F 100 -12.5 -3.82628 | opp_overlap 510441, overlap 510438 510441 AGGCGCATATGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTTGGGGTA TERM 543 510459 - 510441 - f 100 -16 -4.8048 | opp_overlap 510440 510438 510441 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTGGGGT TERM 544 510441 - 510459 + F 100 -16 -2.88854 | opp_overlap 510441, overlap 510440 510438 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTGGGGT dapB 510813 - 511634 + | dihydrodipicolinate reductase TERM 545 511647 - 511664 + F 82 -5.6 -4.93296 | opp_overlap 511647 TAATGCTTTAAATTA CAACCA GTGATG TGGTTG TTTTTATCATAATCA TERM 546 511690 - 511708 + F 85 -2.4 -5.80951 | opp_overlap 511690 AATCATTTGATAATA GGGCAATA TTT TATTATCC TTTTTTATTTTAAAT TERM 547 512847 - 512826 - g 71 -10.9 -3.05596 | CATCTTCTTATCCAA TGGTCCTGG GGAT CCAGAACCA TGCGATTACGCGATC carA 512107 - 513282 + | carbamoyl phosphate synthase small subunit TERM 548 513341 - 513323 - g 74 -2.2 -5.07275 | opp_overlap 513333 513335 513340, overlap 513327 GTACAGATATAAAAA GCATCCTG ATT CTGGGCGC AGGCCCGATTGTTAT TERM 549 514256 - 514237 - g 74 -10 -3.53444 | GCACTGGCCTCTAAA GCAACCGG TTTC CCGATTGC CAAGATTGCCGCCAA TERM 550 514265 - 514279 + G 70 -11.4 -2.52896 | CGATTGCCAAGATTG CCGCCA AAC TGGCGG TCGGTTACACACTGG carB 513298 - 516531 + | carbamoyl phosphate synthase large subunit TERM 551 516584 - 516557 - T 79 -8.4 -4.07885 | opp_overlap 516561, overlap 516561 CATCCGTGGCGAAAA TCAAGGGCGATG GCAA CATCGCCCTTTT TACGTTCGTAGCTTA TERM 552 516580 - 516561 - T 100 -13.6 -3.66908 | opp_overlap 516561, overlap 516557 CGTGGCGAAAATCAA GGGCGATG GCAA CATCGCCC TTTTTACGTTCGTAG TERM 553 516561 - 516580 + T 100 -13.6 -4.7629 | opp_overlap 516561 516557 CGTGGCGAAAATCAA GGGCGATG GCAA CATCGCCC TTTTTACGTTCGTAG YPO0483 517373 - 516759 - | putative LysE type translocator TERM 554 517555 - 517570 + H 70 -2.6 -4.93296 | CCGATGTGATTCAGT TCATTG AAAT TAATGA TTTTTATCCTGATGG YPO0484 517697 - 518497 + | hypothetical protein YPO0485 518494 - 518949 + | hypothetical protein TERM 555 519171 - 519222 + G 77 -11 -3.37796 | GCTATGCCATGGCAT TTACCGGCTGATTTAGCGTGGTTC AAAC GTAACACGTTAAATAAACCGGTAA TTATGGGTCGTAAGA folA 519099 - 519581 + | dihydrofolate reductase TERM 556 519646 - 519611 - f 74 -9.9 -3.13368 | gap 1, opp_overlap 519616, overlap 519609 519605 519616 519618 ACATCAAAACAATTA GCATACAGGCCCATTA GGTAA TAATGGGCCTGTTT-C ATTGTGCCCAGAAAA TERM 557 519642 - 519616 - f 100 -15.3 -2.91094 | opp_overlap 519616, overlap 519611 519609 519605 519618 AAAACAATTAGCATA CAGGCCCATTA GGTAA TAATGGGCCTG TTTCATTGTGCCCAG TERM 558 519616 - 519642 + F 100 -15.3 -3.9941 | opp_overlap 519616 519611 519609 519605 519618 AAAACAATTAGCATA CAGGCCCATTA GGTAA TAATGGGCCTG TTTCATTGTGCCCAG TERM 559 519640 - 519618 - f 86 -12.1 -2.9913 | opp_overlap 519616, overlap 519616 519611 519609 519605 AACAATTAGCATACA GGCCCATTA GGTAA TAATGGGCC TGTTTCATTGTGCCC TERM 560 519680 - 519662 - f 100 -16 -4.37092 | opp_overlap 519662 ATTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC TERM 561 519662 - 519680 + F 100 -16 -3.07307 | opp_overlap 519662 ATTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC tnp 519793 - 520251 + | transposase for the IS1541 insertion element TERM 562 520325 - 520357 + F 100 -11.3 -4.08767 | opp_overlap 520332 520354, overlap 520329 520331 520332 520354 CCTTATAGGCGCATA TGAAAAACCTCCGGC TAT GCCGGAGGATATTTA TTTTAGAAAAATAAA TERM 563 520329 - 520353 + F 100 -9.9 -4.64861 | opp_overlap 520332, overlap 520325 520331 520332 ATAGGCGCATATGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTTTAGAAAAA TERM 564 520331 - 520351 + F 100 -12.5 -3.93868 | opp_overlap 520332, overlap 520329 520325 520332 AGGCGCATATGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTTTAGAAA TERM 565 520350 - 520332 - f 100 -16 -4.8048 | opp_overlap 520331 520329 520325 520332 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTTAGAA TERM 566 520332 - 520350 + F 100 -16 -2.95598 | opp_overlap 520332, overlap 520331 520329 520325 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTTAGAA TERM 567 520354 - 520372 + F 72 -6.2 -4.34737 | opp_overlap 520354, overlap 520325 CTATGCCGGAGGATA TTTATTTT AGA AAAATAAA TTTATTACTTAATGG YPO0488 520786 - 521007 + | hypothetical protein YPO0489 521134 - 521598 + | hypothetical protein TERM 568 521650 - 521621 - T 77 -10.9 -2.78706 | opp_overlap 521626, overlap 521626 AATTATAGGTGAAAT CTAAAGACGCATA AGCT CATGCGTCTTTAA TTAGCGTCTTTACAA TERM 569 521626 - 521645 + T 74 -7.9 -3.93026 | opp_overlap 521621 521626 TAGGTGAAATCTAAA GACGCAT AAGCTC ATGCGTC TTTAATTAGCGTCTT TERM 570 521645 - 521626 - T 75 -8.6 -3.85165 | opp_overlap 521626, overlap 521621 TAGGTGAAATCTAAA GACGCATA AGCT CATGCGTC TTTAATTAGCGTCTT apaH 522557 - 521688 - | diadenosine tetraphosphatase apaG 522951 - 522574 - | ApaG ksgA 523783 - 522965 - | dimethyladenosine transferase pdxA 524771 - 523776 - | 4-hydroxythreonine-4-phosphate dehydrogenase TERM 571 524696 - 524666 - G 81 -14.1 -2.62396 | GATCCGCGCAGACTA CCAGCTCAACAGG CCAAT CCTGTTGAGCCAG AGTGATGGCTAAATC surA 526059 - 524755 - | peptidyl-prolyl cis-trans isomerase SurA imp 528469 - 526127 - | organic solvent tolerance protein djlA 528654 - 529487 + | Dna-J like membrane chaperone protein rluA 530405 - 529785 - | ribosomal large subunit pseudouridine synthase A TERM 572 531472 - 531498 + r 100 -15.4 -3.16881 | opp_overlap 531474 ATATATTTGGGGTAA TAGTGTCCATTA AGA TAATGGACACTA TTCGTCAGATACGTG TERM 573 531496 - 531474 - R 100 -13.6 -3.02263 | opp_overlap 531472 ATATTTGGGGTAATA GTGTCCATTA AGA TAATGGACAC TATTCGTCAGATACG YPO0498 532371 - 531628 - | hypothetical protein YPO0499 532701 - 533714 + | hypothetical protein YPO0500 533725 - 534285 + | hypothetical protein TERM 574 534417 - 534431 + G 70 -11.4 -2.52015 | overlap 534416 TCCGCCACAGTGCGC CGTGCC ATA GGCACG CTTGCTGCGTATGCC TERM 575 535061 - 535075 + G 70 -4.3 -4.67038 | opp_overlap 535061, overlap 535056 GTATGGTGCCAAAAA TCATC CTATT GATGA TTTTGCTTTTGAAGA YPO0501 534285 - 535796 + | hypothetical protein TERM 576 535819 - 535794 - f 73 -5.5 -4.74598 | gap 1, opp_overlap 535797 535802 GAAAGCGAAAAGAAA TAAGCGCTGTGA ATA TCACT-CGCTTA TTAGAGGGGGAATAT TERM 577 535909 - 535893 - f 76 -10.9 -2.72991 | GTACATTTTTAATGA GGCAACT TTG AGTTGCC GAATACTGATTTAAC YPO0502 535959 - 536477 + | hypothetical protein YPO0503 536551 - 536994 + | hypothetical protein YPO0504 537027 - 538871 + | hypothetical protein YPO0505 538864 - 539847 + | hypothetical protein clpB 539850 - 542453 + | putative Clp ATPase YPO0507 542557 - 544905 + | hypothetical protein YPO0508 544918 - 545490 + | hypothetical protein YPO0509 545515 - 547137 + | hypothetical protein TERM 578 547225 - 547265 + G 82 -6.9 -4.88795 | opp_overlap 547234 GATTATTGGCCGGCA CTTTACACAGCGTCAGTTG CAG CAGTTAACGCTGTCTGAGG TTTATTTTATTCAAT YPO0510 547163 - 548266 + | hypothetical protein YPO0511 548259 - 548876 + | hypothetical protein YPO0511a 548882 - 549247 + | hypothetical protein TERM 579 549461 - 549444 - g 79 -9.1 -4.18488 | opp_overlap 549446 ATTGAGCTGAATAAA GAGGGGT GGTC ACCCCCC GGTTTGTATCAGGGG YPO0512 549240 - 549731 + | putative lipoprotein TERM 580 550640 - 550628 - g 70 -4.8 -4.65895 | opp_overlap 550637 GTGTTGATGCAAAAA CAGG TACAC CCTG AGCAGTTGTTCCAAT YPO0513 549851 - 551206 + | hypothetical protein YPO0514 551203 - 552813 + | hypothetical protein YPO0515 552863 - 556315 + | hypothetical protein YPO0516 556337 - 556690 + | hypothetical protein TERM 581 556736 - 556714 - T 100 -13.5 -5.71712 | CGTCAGACAAAAAAA TATCCGGGG GAATG CCCCGGATA TCAGACTGCTGACAA TERM 582 556825 - 556799 - T 70 -7.2 -3.82218 | gap 1, opp_overlap 556808, overlap 556800 AGGCAGAGGAGTAAA GCGTCCGCGCC AGGGAG GGCGCGG-CTC GAGCCTACATGGATG hepA 559852 - 556946 - | ATP-dependent helicase HepA TERM 583 559505 - 559467 - G 90 -11.7 -4.08216 | opp_overlap 559478 559479 TTACGGGCGCGAAAA CGCAGGGCAAAGCGATC CATGC GATCGATTTGACCGGCG AATAAGCGATCCTGT dinA 562682 - 560313 - | DNA polymerase II TERM 584 561168 - 561142 - G 78 -3.7 -5.1101 | gap 2, overlap 561143 CGAGGATCGAAAAAA CGGCAGCCGCTGG AAC CCAGC-AC-GCCA TAAAAGGCATTCATA TERM 585 561864 - 561853 - G 71 -7.2 -4.09805 | CCATCAATAATTAAA CGCC CGGC GGCG GAAGCAAAGAAATGC TERM 586 563314 - 563337 + G 76 -8.1 -4.2074 | CCTTACCCAGTGTGA TTGGTGGCC TGACAT GGCCGCCGA TTTATCTCTTCCCCG YPO0519 562878 - 563645 + | putative DedA-family membrane protein thiQ 564397 - 563714 - | thiamine transporter ATP-binding subunit thiP 565970 - 564411 - | thiamine transporter membrane protein TERM 587 564639 - 564606 - G 77 -10.9 -3.58905 | opp_overlap 564605 564604, overlap 564608 564618 ATCGCCGATAGATAA CACACTGGCAAAGGC CAGC GCCTGAGCCAGTGGG CGTTTCAGGGCGCGT TERM 588 564637 - 564608 - G 80 -12.1 -3.37198 | opp_overlap 564605 564604, overlap 564606 564618 CGCCGATAGATAACA CACTGGCAAAGGC CAGC GCCTGAGCCAGTG GGCGTTTCAGGGCGC TERM 589 565988 - 565971 - R 77 -10.5 -3.14931 | CCCAGCGGCCAGCAA CCCCGGC CATA GCCAGGG CGCGATTAACGGCTG tbpA 566986 - 565994 - | thiamine transporter substrate binding subunit TERM 590 566678 - 566700 + g 74 -7 -4.30987 | opp_overlap 566677, overlap 566674 GTTACGGGTATCAAC CTGGCTTG GGGTAAA CAAGCCGG TTTGTTCTGCCGCCT TERM 591 566749 - 566759 + g 74 -4.6 -4.75174 | ACCCTAAAATCACAT CGGC CTG GCTG TTTTTACCTTCCATC YPO0523 567541 - 567825 + | hypothetical protein YPO0524 569587 - 567926 - | transcriptional regulator SgrR TERM 592 569766 - 569787 + H 100 -8.7 -5.93252 | TGGTGTTTTTCACCA GCCAGTAGG TTTT TCTGCTGGC TTTTTTCTTTTTCCC YPO0525 569825 - 569998 + | hypothetical protein TERM 593 570216 - 570227 + T 71 -4.4 -4.84359 | CACCATTATGATTAT GCTA ATAA TAGC TTTTTCTGGCGCTGG TERM 594 570778 - 570788 + T 79 -3.2 -5.31855 | GCTGATGTTTAGCAT TGCC GCC GGTA TTTTTGTTATTAGTG YPO0527 572033 - 571251 - | transposase/IS protein TERM 595 571949 - 571963 + g 77 -11.4 -3.3506 | overlap 571962 CTGCCTGTTGTGACA GCGCAG GCG CTGCGC TTATAAGGCTTTCCA y1093 573052 - 572030 - | transposase for insertion sequence IS100 TERM 596 573074 - 573056 - R 100 -13.2 -4.01078 | AAAAGTGACCATAAA CTCTCCTG AAT CAGGAGAG CAGATTACCCCCTGG TERM 597 573491 - 573521 + r 86 -12 -3.20896 | gap 1, overlap 573489 573488 AGTTAAACGTGTTAC TTGTTGG-GCCGG TACGAC CCGGCACCAACAA TCTATTAGTTACTTA leuD 574234 - 573632 - | isopropylmalate isomerase small subunit TERM 598 574168 - 574181 + g 70 -8.1 -3.78022 | GCTTAGGGATAATCG CGTCG GTAT CGACG TTTGCTGCATCTAAC leuC 575679 - 574249 - | isopropylmalate isomerase large subunit TERM 599 575180 - 575192 + g 70 -9.1 -3.64703 | ATGGTTTTGGCTCGC CCCTG CTT CAGGG TTTGGGTCGCCAACA TERM 600 575621 - 575637 + g 70 -2.9 -4.80882 | opp_overlap 575622, overlap 575622 GGGGCTTCATGCACA ATGTGCG CAT CGTACAA TTTTTGGTATAACGT leuB 576772 - 575681 - | 3-isopropylmalate dehydrogenase leuA 578337 - 576775 - | 2-isopropylmalate synthase TERM 601 578410 - 578378 - R 100 -11.3 -4.4009 | opp_overlap 578385, overlap 578382 578384 578385 GCTCAGCGGATAAAA TAAATATCCTCCGGC ATA GCCGGAGGTTTTTCA TATGCGCCTATAAGG TERM 602 578406 - 578382 - R 100 -9.9 -4.77775 | opp_overlap 578385, overlap 578378 578384 578385 AGCGGATAAAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCATATGCGCCTAT TERM 603 578404 - 578384 - R 100 -12.5 -3.99938 | opp_overlap 578385, overlap 578382 578378 578385 CGGATAAAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 604 578385 - 578403 + r 100 -16 -4.8048 | opp_overlap 578384 578382 578378 578385 GGATAAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 605 578403 - 578385 - R 100 -16 -2.98878 | opp_overlap 578385, overlap 578384 578382 578378 GGATAAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC tnp 578942 - 578484 - | transposase for the IS1541 insertion element TERM 606 579073 - 579055 - H 100 -16 -3.07307 | opp_overlap 579055 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 607 579055 - 579073 + H 100 -16 -4.36914 | opp_overlap 579055 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 608 579093 - 579112 + H 86 -10.6 -3.83155 | opp_overlap 579094, overlap 579094 CTGGGCACAAAAAAA ACCCGCGC ATTT GCGCGGGC TTGTTAATCTTGATG TERM 609 579111 - 579094 - H 100 -14.1 -5.93809 | opp_overlap 579093 579094 TGGGCACAAAAAAAA CCCGCGC ATTT GCGCGGG CTTGTTAATCTTGAT TERM 610 579094 - 579111 + H 95 -14.1 -2.8917 | opp_overlap 579094, overlap 579093 TGGGCACAAAAAAAA CCCGCGC ATTT GCGCGGG CTTGTTAATCTTGAT TERM 611 579876 - 579894 + H 72 -6.2 -4.35885 | opp_overlap 579869 579875 579876, overlap 579869 ATTATAATTAAAATT TTTATATT ACT AATATAAA TTTGTTGTGGTGGCT TERM 612 580946 - 580930 - g 80 -2.2 -5.39721 | opp_overlap 580930 TCATTAGATAAAAAA GGGTCA TTCAG TGAGCC TTATTACGACTCAAC leuO 580264 - 581220 + | leucine transcriptional activator YPO0536 581549 - 581755 + | hypothetical protein YPO0537 581752 - 583557 + | putative AMP-binding enzyme-family protein TERM 613 583576 - 583615 + F 100 -13.6 -3.5362 | overlap 583574 583578 GTTCACCATTCCTCC CCGCAGTGACCGGTGTTA AGTC TCACACTGGTCGCTGCTG TCTTTCTGACCGTTC TERM 614 583578 - 583613 + F 100 -14.8 -3.33798 | overlap 583576 583574 TCACCATTCCTCCCC GCAGTGACCGGTGTTA AGTC TCACACTGGTCGCTGC TGTCTTTCTGACCGT YPO0538 583588 - 583698 + | hypothetical protein TERM 615 583948 - 583934 - f 75 -5.6 -4.64159 | opp_overlap 583936, overlap 583936 ACAAATAAGAATAAA GAGGCG TTG CGCCTT TCCTACAGAATATCG TERM 616 583936 - 583946 + F 73 -8.2 -3.73402 | opp_overlap 583934 583936 AAATAAGAATAAAGA GGCG TTG CGCC TTTCCTACAGAATAT TERM 617 583946 - 583936 - f 75 -8.2 -3.90009 | opp_overlap 583936, overlap 583934 AAATAAGAATAAAGA GGCG TTG CGCC TTTCCTACAGAATAT TERM 618 584465 - 584488 + G 77 -11 -3.36492 | gap 1 CCTTTTATCTGGCAT CCACTGG-CCG TCC CGGTCCGGTGG TTATCGACTTGCCAA ilvI 584017 - 585744 + | acetolactate synthase 3 catalytic subunit ilvH 585747 - 586241 + | acetolactate synthase 3 regulatory subunit TERM 619 586270 - 586290 + F 100 -13.3 -5.24129 | CGCTCTAATGATCGG GCTCAGCGC ATA GCGTTGAGC TTTTTTGTGCCCAGA TERM 620 586327 - 586309 - f 100 -16 -4.36914 | opp_overlap 586309 TTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC TERM 621 586309 - 586327 + F 100 -16 -3.07307 | opp_overlap 586309 TTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC tnp 586440 - 586898 + | transposase for the IS1541 insertion element TERM 622 586972 - 587004 + T 100 -11.3 -5.54403 | opp_overlap 586979, overlap 586978 586979 CCTTATAGGCGCATA TGAAAAACCTCCGGC TAT GCCGGAGGATATTTA TTTTTCTTATTTTTT TERM 623 586978 - 586998 + T 100 -12.5 -4.13123 | opp_overlap 586979, overlap 586972 586979 AGGCGCATATGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTTTTCTTA TERM 624 586997 - 586979 - T 100 -16 -4.8048 | opp_overlap 586978 586972 586979 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTTTCTT TERM 625 586979 - 586997 + T 100 -16 -3.05433 | opp_overlap 586979, overlap 586978 586972 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTTTCTT YPO0542 587336 - 587220 - | hypothetical protein TERM 626 587354 - 587367 + H 74 -6.7 -4.33165 | overlap 587347 GGATGCTGGCTCTCG GCAGA GCGC TCTGC TTTTCATCACTTTAC TERM 627 587420 - 587436 + G 70 -9.3 -3.53012 | opp_overlap 587419 GAAACTGGATGAGAT CGCGCGC CTT GCGGGCG TTTCGCGCACAACGG fruR 587403 - 588413 + | DNA-binding transcriptional regulator FruR TERM 628 588428 - 588445 + T 100 -11.3 -4.45544 | opp_overlap 588428 GTTCACTATAACGAA TCAGGGC ACCC GCCCTGA TTTTGATTGCTGACA TERM 629 588445 - 588428 - T 89 -11.3 -3.47322 | opp_overlap 588428 GTTCACTATAACGAA TCAGGGC ACCC GCCCTGA TTTTGATTGCTGACA YPO0544 588990 - 588544 - | hypothetical protein TERM 630 588605 - 588593 - G 83 -5.5 -5.09173 | CAATATTCCAAAAAA TAGCC GTA GGCCA CCCCCATAACCATTG TERM 631 589433 - 589407 - H 84 -10.1 -3.82218 | gap 1, opp_overlap 589416, overlap 589408 589423 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 632 589434 - 589408 - H 72 -10.1 -2.88849 | gap 1, opp_overlap 589416, overlap 589407 589423 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT YPO0546 590086 - 590544 + | cell division protein MraZ mraW 590547 - 591509 + | S-adenosyl-methyltransferase MraW ftsL 591506 - 591823 + | cell division protein FtsL TERM 633 591933 - 591953 + G 74 -6.8 -4.31085 | opp_overlap 591934, overlap 591934 GCGTCAGGAAGAACA AGCCAGCT TTATT AGCTGGCG TTTTGCGTTGCTGTG TERM 634 591952 - 591934 - g 84 -10.3 -3.99374 | opp_overlap 591933 591934 CGTCAGGAAGAACAA GCCAGCT TTATT AGCTGGC GTTTTGCGTTGCTGT TERM 635 591934 - 591952 + G 71 -10.3 -3.17928 | opp_overlap 591934, overlap 591933 CGTCAGGAAGAACAA GCCAGCT TTATT AGCTGGC GTTTTGCGTTGCTGT TERM 636 593116 - 593132 + G 70 -8.7 -3.60098 | opp_overlap 593116 593118 CGGTGGTCTGACATA GAGAGGG CCA CCTTCTC TTTCGGCTACGGGCT ftsI 591889 - 593652 + | penicillin-binding protein 3 murE 593654 - 595126 + | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase murF 595123 - 596499 + | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase mraY 596493 - 597575 + | phospho-N-acetylmuramoyl-pentapeptide-transferase TERM 637 598416 - 598446 + G 79 -11.3 -3.55622 | gap 2 CCGCCCTGGCATTAG CT-GATG-CCGTGGG TAT CCCACGGGCATCCAG TTTGAAAGCCTTGAC murD 597578 - 598894 + | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase ftsW 598894 - 600096 + | cell division protein FtsW murG 600093 - 601163 + | N-acetylglucosaminyl transferase murC 601301 - 602776 + | UDP-N-acetylmuramate--L-alanine ligase ddl 602769 - 603689 + | D-alanine--D-alanine ligase TERM 638 603751 - 603738 - g 70 -3.1 -4.82901 | gap 1 TGCGGCGGAGAAAAA TGCAGC CCG GC-GCA GTAACGGGAGCCAAT TERM 639 604064 - 604052 - g 76 -7.7 -4.30014 | CGGATGAACTTAAAA TCCAC CTG GTGGA GTACGTGCCCTTCGC ftsQ 603691 - 604518 + | cell division protein FtsQ ftsA 604545 - 605801 + | cell division protein FtsA TERM 640 606156 - 606123 - g 72 -8.1 -3.85522 | overlap 606125 AATTCAGCAGAAGAA GACCGTGAAGCTCTG CGTG CAGCGCTTGACGGTG CGGATATGGTCTTTA TERM 641 606154 - 606125 - g 77 -10.7 -3.50808 | overlap 606123 TTCAGCAGAAGAAGA CCGTGAAGCTCTG CGTG CAGCGCTTGACGG TGCGGATATGGTCTT ftsZ 605874 - 607025 + | cell division protein FtsZ TERM 642 607204 - 607194 - g 79 -5.4 -5.04385 | CACACCGGTAAAAAA GTCA CGC TGAC AATGCGACCCGCGCC lpxC 607125 - 608045 + | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase TERM 643 608225 - 608262 + T 80 -11.4 -2.71731 | opp_overlap 608215 AGCTACTTATCACGC TTGGTTGCGTTGGC ACCCTCTCCG GCCAACGCAGCCAG TCGTTCCAAGATCAC YPO0562 608742 - 608212 - | hypothetical protein YPO0563 608765 - 609298 + | SecA regulator SecM TERM 644 609465 - 609445 - g 70 -4.7 -4.65895 | overlap 609448 CGCCGCATGCAAAAA GTAGTTGAT GTC ATCAACCGC ATGGAACCTGATATT TERM 645 610492 - 610482 - g 76 -6.8 -4.50661 | opp_overlap 610482 610481 AATCCAGAATGAAAA CCAG ACA CTGG CTTCTATCACTTTCC secA 609376 - 612090 + | preprotein translocase subunit SecA TERM 646 612137 - 612120 - f 100 -12.7 -4.21343 | opp_overlap 612116 612132, overlap 612132 TGTAATATAGATAAA GGGCGGT TAAT ACCGCCC TGAGGTTATTGACAA TERM 647 612215 - 612241 + F 72 -10.1 -2.88849 | gap 1, opp_overlap 612204, overlap 612210 612216 ACATCCATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCTCTGCC TERM 648 612216 - 612242 + F 84 -10.1 -3.82218 | gap 1, opp_overlap 612204, overlap 612210 612215 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCTCTGCCT TERM 649 612302 - 612326 + F 89 -7.2 -4.97888 | gap 1, overlap 612305 GGTTTGTCAGCAGTC TGA-GGGCGGT TAAT ACCGCCCTTTA TTTTTAAGTTTTTTT TERM 650 612305 - 612322 + F 100 -12.7 -4.92828 | overlap 612302 TTGTCAGCAGTCTGA GGGCGGT TAAT ACCGCCC TTTATTTTTAAGTTT mutT 612385 - 612771 + | nucleoside triphosphate pyrophosphohydrolase TERM 651 612809 - 612836 + T 100 -9.3 -5.24129 | gap 1, opp_overlap 612813 CCTACTTTATTTTAA TGGAGCAAGACG TCCGT CGT-TTGCTCCA TTTTTTGTGCCCAGA TERM 652 612873 - 612855 - T 100 -16 -4.36914 | opp_overlap 612855 TTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC TERM 653 612855 - 612873 + T 100 -16 -3.07307 | opp_overlap 612855 TTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC YPO0566 613815 - 613033 - | transposase/IS protein TERM 654 613731 - 613745 + g 77 -11.4 -3.3506 | overlap 613744 CTGCCTGTTGTGACA GCGCAG GCG CTGCGC TTATAAGGCTTTCCA y1093 614834 - 613812 - | transposase for insertion sequence IS100 TERM 655 614856 - 614838 - R 100 -13.2 -4.01078 | AAAAGTGACCATAAA CTCTCCTG AAT CAGGAGAG CAGATTACCCCCTGG TERM 656 615069 - 615047 - R 100 -8.5 -5.40072 | opp_overlap 615068 TCCCCCTTAAAAAAA TACCCTACC GGATG GATAGGGTA TCGCTGATATTAACT YPO0568 615481 - 615113 - | hypothetical protein YPO0569 616096 - 615812 - | hypothetical protein YPO0569a 616488 - 616093 - | hypothetical protein yqjD 616796 - 616491 - | hypothetical protein YPO0571 616947 - 616801 - | hypothetical protein YPO0572 617331 - 616951 - | hypothetical protein TERM 657 617525 - 617552 + r 91 -12 -3.4759 | overlap 617526 TGAGAGGAACGAGTT TGATACGGGGAG TCGA CTCCCCGTAGCG TTGATTATCCTAAGT TERM 658 617526 - 617551 + r 93 -13.3 -2.68072 | overlap 617525 GAGAGGAACGAGTTT GATACGGGGAG TCGA CTCCCCGTAGC GTTGATTATCCTAAG YPO0573 617946 - 617557 - | hypothetical protein yqjA 618641 - 617943 - | putative DedA-family membrane protein YPO0575 619473 - 618919 - | putative lipoprotein exuR 620495 - 619701 - | DNA-binding transcriptional repressor ExuR TERM 659 620074 - 620111 + g 70 -2.8 -4.81851 | gap 2, opp_overlap 620071, overlap 620077 TGGAATTTAAGATCC CATTGAGAGTCACGGAAG CGAT CTTCC-TGACGCGCA-TG TTTTTGAATTTCAAT TERM 660 620674 - 620707 + r 79 -11.1 -3.2115 | opp_overlap 620676 620681, overlap 620676 620681 GCGGATAACAGGAGA GATGAAAGCCCGATA AATT TACCGGGCTTTCATG TTAGTAGGTCATTTA TERM 661 620705 - 620676 - R 100 -15.9 -3.02381 | opp_overlap 620674 620676 620681, overlap 620681 GGATAACAGGAGAGA TGAAAGCCCGATA AATT TACCGGGCTTTCA TGTTAGTAGGTCATT TERM 662 620676 - 620705 + r 100 -13.7 -3.16264 | opp_overlap 620676 620681, overlap 620674 620681 GGATAACAGGAGAGA TGAAAGCCCGATA AATT TACCGGGCTTTCA TGTTAGTAGGTCATT TERM 663 620700 - 620681 - R 84 -10 -3.90358 | opp_overlap 620676 620674 620681, overlap 620676 ACAGGAGAGATGAAA GCCCGATA AATT TACCGGGC TTTCATGTTAGTAGG TERM 664 620681 - 620700 + r 74 -7.8 -3.95022 | opp_overlap 620681 620676, overlap 620676 620674 ACAGGAGAGATGAAA GCCCGATA AATT TACCGGGC TTTCATGTTAGTAGG exuT 622062 - 620758 - | ExuT transport protein YPO0578 622106 - 622276 + | hypothetical protein uxaC 622807 - 624216 + | glucuronate isomerase TERM 665 625402 - 625373 - g 73 -2.9 -5.00616 | gap 1 GCTTTGTGGAAAAAA CCATTA-CGGAAGA GAT TGTTCCGGTATTGG ATCTGCCCGAAGACG uxaB 624415 - 625866 + | altronate oxidoreductase uxaA 625877 - 627367 + | altronate hydrolase TERM 666 627417 - 627458 + F 75 -8.7 -3.63559 | gap 1, opp_overlap 627418, overlap 627415 627418 CTGTTTTTTATGGAA ACGCACTTCCCCTTCACACT TTA AGC-TGTAGGGGGAGTGCGC TGTTTGCTTATTAAT TERM 667 627457 - 627418 - f 93 -12.2 -3.64703 | gap 1, opp_overlap 627417 627415 627418 TGTTTTTTATGGAAA CGCACTTCCCCTTCACACT TTA AGC-TGTAGGGGGAGTGCG CTGTTTGCTTATTAA TERM 668 627418 - 627457 + F 83 -12.2 -2.77051 | gap 1, opp_overlap 627418, overlap 627417 627415 TGTTTTTTATGGAAA CGCACTTCCCCTTCACACT TTA AGC-TGTAGGGGGAGTGCG CTGTTTGCTTATTAA YPO0582 627520 - 628050 + | hypothetical protein TERM 669 628090 - 628066 - T 100 -9.9 -4.51812 | opp_overlap 628069, overlap 628068 628069 TTTGATAACAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCATATGCGCCTAT TERM 670 628088 - 628068 - T 100 -12.5 -3.86244 | opp_overlap 628069, overlap 628066 628069 TGATAACAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 671 628069 - 628087 + T 100 -16 -4.8048 | opp_overlap 628068 628066 628069 GATAACAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 672 628087 - 628069 - T 100 -16 -2.90662 | opp_overlap 628069, overlap 628068 628066 GATAACAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC tnp 628626 - 628168 - | transposase for the IS1541 insertion element TERM 673 628757 - 628739 - R 100 -16 -3.07307 | opp_overlap 628739 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 674 628739 - 628757 + r 100 -16 -4.36914 | opp_overlap 628739 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 675 628802 - 628777 - R 100 -9.8 -5.60993 | opp_overlap 628777 CTGGGCACAAAAAAA TGCCAGTCAA ACTTAA CTGACTGGCA TTTTGCGTAGGTAAA TERM 676 628777 - 628802 + r 83 -9.1 -4.19817 | opp_overlap 628777 CTGGGCACAAAAAAA TGCCAGTCA AACTTAAC TGACTGGCA TTTTGCGTAGGTAAA YPO0584 630095 - 628827 - | serine/threonine transporter SstT TERM 677 630262 - 630287 + r 76 -6.9 -4.44667 | gap 1 TGACTTTGGGTATAG CGCTCAAGCC GGAACGA GGC-TGAGCG TTTATTGTTCACACC TERM 678 630498 - 630477 - R 70 -3.7 -4.85653 | gap 1, opp_overlap 630496, overlap 630478 630479 TATATACAAAATAAA TGTGGGGCTA TGG TAGCCCCG-A TCGATAGATTGTAGT YPO0585 631613 - 630618 - | putative MocA-family oxidoreductase YPO0586 632325 - 631816 - | hypothetical protein TERM 679 632520 - 632548 + r 100 -11.7 -4.431 | GGATTAGCGGTCTGT CGATACCTGCACC ATA GGCACAGGTATCG TTTTATCAATGGATA YPO0587 635548 - 632564 - | putative autotransporter protein TERM 680 634493 - 634511 + g 70 -9 -3.55378 | overlap 634491 GATGTTAGAATCGCC TAGCATAT TCC ATATGCTA TGTTTATCGATAAAT TERM 681 635022 - 635040 + g 72 -3.8 -4.8543 | opp_overlap 635022 GAAACATAGAGAATA CCATTATC ACC GACAGTGG TTTTTGTGGCACTTC TERM 682 635912 - 635930 + H 100 -14.6 -3.54459 | opp_overlap 635926 635927 CTTGCGGTGTGGGTT CGCGCTTG GCA CAAGCGCG TTTAAAACGCATTAA YPO0588 636017 - 637204 + | putative methyltransferase TERM 683 637213 - 637244 + T 100 -15.2 -3.85879 | overlap 637239 TTTCTAATCGGTATT TCACAGGGTGGGGT TTTC GCCACACCCTGTGA TTATTCTCAGTTCTA fadH 639341 - 637320 - | 2,4-dienoyl-CoA reductase TERM 684 638355 - 638369 + g 70 -2.7 -4.82901 | overlap 638356 GTTAATTTCATCGGC CCGGC CCTGT GCCGC TTTTTGTACAAAAGC TERM 685 639383 - 639424 + r 82 -3 -5.4756 | gap 2 ACCATTATTGTTATA TCTCCGCCG-CC-CTTACTG AATC CAGCAAGTGGTCGGATGAGA TTTTTTATTCAAATT hdeD 640123 - 639554 - | acid-resistance membrane protein YPO0591 640219 - 640452 + | hypothetical protein YPO0592 642013 - 640514 - | putative kinase protein TERM 686 641969 - 641983 + g 73 -6.4 -4.4648 | CTCGTCAACGTACTG GATGGT TTC GCCATC TTTTGTCGTACAGGT YPO0593 643778 - 642045 - | hypothetical protein YPO0594 644817 - 643834 - | hypothetical protein TERM 687 644915 - 644881 - R 100 -8.6 -5.626 | opp_overlap 644884, overlap 644884 GATGCGACAAAAAAA TAAGGCAAAGCGCC GTGAATG GGGGCTTTGCCTTT ACATTACAGTACCAA TERM 688 644884 - 644912 + r 86 -10.3 -3.76125 | opp_overlap 644881 644884 GCGACAAAAAAATAA GGCAAAGCGCC GTGAATG GGGGCTTTGCC TTTACATTACAGTAC TERM 689 644912 - 644884 - R 100 -10.3 -4.89054 | opp_overlap 644884, overlap 644881 GCGACAAAAAAATAA GGCAAAGCGCC GTGAATG GGGGCTTTGCC TTTACATTACAGTAC YPO0595 645557 - 644919 - | hypothetical protein terX 646200 - 645559 - | putative tellurium resistance protein terY 646871 - 646233 - | putative tellurium resistance protein TERM 690 647764 - 647774 + G 70 -2.4 -5.04987 | overlap 647744 647770 ATGTGCGCTTATCTG CGCC CTC GGCC TTTTTTAGCCGTATT TERM 691 648023 - 648011 - g 73 -9.1 -3.6959 | overlap 648013 ACAGCAGGATTTAAA CAGCG GCA CGCTG GCGCTAAACGTCGTG YPO0598 647586 - 649274 + | putative hemolysin activator protein TERM 692 650591 - 650564 - g 75 -9 -3.83205 | overlap 650565 ACCCTTGATATTAAA GCCCGTGGGCAG CTAA CCGCCCAAGGGA AAAATATTAGCGGCA TERM 693 650590 - 650565 - g 78 -12.5 -2.89602 | overlap 650564 CCCTTGATATTAAAG CCCGTGGGCAG CTAA CCGCCCAAGGG AAAAATATTAGCGGC TERM 694 653836 - 653821 - g 70 -2.4 -4.91712 | overlap 653823 653831 TGCAACGGATAAAAA CGGCAC ACTA GCGCTG TTGGCACCGGTAATT TERM 695 654136 - 654121 - g 79 -8.2 -4.4009 | CTGGACGGCAGAAAA CCCCGA TATT CCGGGG GGGCGTTATACTCAA TERM 696 654592 - 654562 - g 80 -9.6 -4.07133 | TACGGTGATAAACAA TGGGGCAGCACCCG GCG CGATTGTCGCCCCA CGTGATCGCGACAGC TERM 697 656166 - 656150 - g 78 -3.6 -5.14965 | overlap 656151 656152 ACCGGGACTAAAAAA GGGCTG CTCTC CAGCAC CACCACCCGCAGCGA TERM 698 658458 - 658476 + G 74 -9.5 -3.55444 | opp_overlap 658457 CACTGAGTACATTAG CCGCCGG GCTGG CCGGTGG TTTGACAGGTGACAG YPO0599 649319 - 659206 + | putative adhesin YPO0600 659203 - 659436 + | hypothetical protein YPO0601 659702 - 659929 + | hypothetical protein YPO0602 660010 - 660441 + | hypothetical protein yapF 664010 - 661725 - | putative autotransporter protein YPO0607 665065 - 664070 - | hypothetical protein YPO0608 666546 - 665167 - | hypothetical protein TERM 699 665908 - 665920 + g 82 -4.1 -5.24129 | ATCAACGAAGTAGCC CAGTG ACG CATTG TTTTTTGTCGACCAA TERM 700 666992 - 667016 + G 71 -11.5 -2.79023 | opp_overlap 667002, overlap 666990 GTTGGCCCCTCTGGC TGCGCAAAATC AAC GATGTTGCGCA TGATTGCTGGCCTTG YPO0609 666869 - 667987 + | putative transporter ATP-binding protein TERM 701 668786 - 668819 + G 76 -8.1 -4.26792 | overlap 668788 668816 ACAGCTACAGCCAGT CACGCTGTCCGCG GGTGACAG CGCAGACAGCGTA TTTTACGGTTTCTAT TERM 702 668788 - 668817 + G 80 -10.7 -3.72407 | overlap 668786 668816 AGCTACAGCCAGTCA CGCTGTCCGCG GGTGACAG CGCAGACAGCG TATTTTACGGTTTCT YPO0610 668070 - 671423 + | hypothetical protein TERM 703 671496 - 671480 - f 72 -6.5 -4.36914 | opp_overlap 671480 TGTGGCGCTACAAAA GCCTGAG TGG CTCATGC TATAGTAAATTCCTT YPO0611 671532 - 672518 + | LacI-family regulatory protein TERM 704 673781 - 673768 - g 70 -8.1 -3.66095 | AAAGTGGTACTGAAA GGGGA AATA TCCCC GGAACAAGCGGTTGC YPO0612 672595 - 673839 + | putative sugar binding protein YPO0613 673893 - 674774 + | putative permease protein TERM 705 675292 - 675305 + G 80 -2.3 -5.42259 | overlap 675293 675303 CAGGATCGATGGCGC AGGTG AATT CACCA TTTTTTTCAAGGTGG YPO0614 674774 - 675592 + | putative permease TERM 706 675949 - 675965 + G 77 -12.3 -3.10164 | opp_overlap 675939 675936 ATTGATACCCGCTTC GTTGCCG AAG CGGCAAC TTGCCTGCTGGCTCG YPO0615 675622 - 676104 + | hypothetical protein TERM 707 676875 - 676888 + G 70 -4.5 -4.70879 | overlap 676876 GAGGCAGGCGTTGGC TCGGT GATG ACCGG TTTTTGCGATTTCGG TERM 708 677476 - 677454 - g 70 -9.9 -3.18383 | gap 1 ATGTCGATCTATCAA TCCCTCTGCG CTAT CGCAG-GGGA GGTTAAGGTGATCAC YPO0616 676155 - 678338 + | putative glycosyl hydrolase YPO0617 679928 - 678402 - | hypothetical protein YPO0618 681702 - 679933 - | hypothetical protein TERM 709 681716 - 681702 - R 71 -10 -2.62616 | GGATGCCGTATATCA TGGCGA TCA TCGCCA TCAATGCACATAGCA YPO0619 682867 - 681818 - | multidrug resistance protein MdtN YPO0620 683203 - 682877 - | hypothetical protein TERM 710 683117 - 683146 + g 71 -6.3 -4.39287 | opp_overlap 683117 CGCTATAGCCGATAA CAGGATCAATGGC CCAC GCCATAGCGCCTG TTTTGCTGTCGTTAA YPO0621 683409 - 683209 - | hypothetical protein YPO0622 683689 - 683582 - | hypothetical protein TERM 711 684266 - 684250 - g 80 -2.2 -5.44721 | opp_overlap 684250 AGCAGTGTAAAAAAA GCGG ATGTTGGTA CCGC TGTATTGGATCTCAT YPO0623 684175 - 685407 + | putative aminotransferase TERM 712 685450 - 685460 + G 78 -2.4 -5.25699 | opp_overlap 685441 685440 AAATATGGCATTACT GCCG ATG CTGC TTTTTATTGTGTCGT YPO0624 685400 - 686851 + | hypothetical protein YPO0625 686855 - 687301 + | hypothetical protein TERM 713 687646 - 687636 - g 72 -4 -4.7497 | CTTATCCATGAAAAA TCTT GGG AAGA ACGTGATTTTATCAT YPO0626 687471 - 688061 + | hypothetical protein YPO0627 688077 - 688457 + | putative translational inhibitor protein TERM 714 688778 - 688794 + G 73 -2.9 -4.91511 | CCCGAGACGATGTAC CCCAGTG TGC CATTCGG TTTTTCTCATGCGGT TERM 715 689015 - 689040 + G 78 -6.1 -4.82901 | TCACCGGCGAATTTG GCCGCAATTTG CGCA CAAATCGGGGC TTTTTATGAGGGCGC YPO0628 688742 - 689146 + | putative translational inhibitor protein YPO0629 689663 - 689361 - | hypothetical protein YPO0630 690639 - 689923 - | hypothetical protein YPO0631 690801 - 691733 + | LysR-family regulatory protein YPO0634 692850 - 692692 - | hypothetical protein TERM 716 692735 - 692750 + g 74 -4 -5.00616 | TGTGCCAGATTTTGT TTGAGT TGCT GCTCAA TTTTTTGCACAGAAA YPO0635 693248 - 693048 - | hypothetical protein YPO0636 693382 - 693636 + | hypothetical protein TERM 717 693779 - 693797 + F 100 -13.2 -4.01078 | CCAGGGGGTAATCTG CTCTCCTG ATT CAGGAGAG TTTATGGTCACTTTT y1093 693801 - 694823 + | transposase for insertion sequence IS100 TERM 718 694904 - 694890 - g 77 -11.4 -3.3506 | overlap 694881 TGGAAAGCCTTATAA GCGCAG CGC CTGCGC TGTCACAACAGGCAG YPO0638 694820 - 695602 + | transposase/IS protein YPO0639 695728 - 697110 + | hypothetical protein YPO0640 697119 - 697589 + | hypothetical protein YPO0641 697667 - 698071 + | hypothetical protein YPO0641a 698088 - 698378 + | hypothetical protein YPO0642 698575 - 698694 + | hypothetical protein TERM 719 698902 - 698932 + T 100 -9.8 -4.93877 | opp_overlap 698905, overlap 698905 TATCCCAGAAATAAC AAAGGAGTTACGCT ATT AACGTAACTCCTTG TTTTATTTGGTGGCC TERM 720 698905 - 698929 + T 100 -11.5 -4.56436 | opp_overlap 698905, overlap 698902 CCCAGAAATAACAAA GGAGTTACGCT ATT AACGTAACTCC TTGTTTTATTTGGTG TERM 721 698929 - 698905 - T 100 -13.7 -4.63048 | opp_overlap 698905 698902 CCCAGAAATAACAAA GGAGTTACGCT ATT AACGTAACTCC TTGTTTTATTTGGTG TERM 722 699165 - 699189 + T 78 -4.2 -5.1963 | opp_overlap 699165, overlap 699155 TTATAGGAAAAAAAA TCCCGACACA AATAA TATGCCGGGA TTTTTATTACTTCAC TERM 723 699189 - 699165 - T 100 -8.6 -5.90981 | opp_overlap 699165 699155 TTATAGGAAAAAAAA TCCCGACACA AATAA TATGCCGGGA TTTTTATTACTTCAC rpoD 701050 - 699212 - | RNA polymerase sigma factor RpoD TERM 724 700315 - 700340 + g 80 -3.1 -5.24551 | overlap 700316 GCTTCAGAATTTCAG CGGCAGCATTC GCGT GATTGCGGCCA TTTTTCTTGATTTCC TERM 725 701160 - 701179 + r 81 -9.3 -3.87869 | GCTATAGCGGCATAT TGTGGGG AGTTGC CCCCACA TTTATCGGCAATTAA dnaG 702956 - 701208 - | DNA primase TERM 726 701366 - 701356 - G 74 -6.8 -4.37092 | overlap 701358 AGCGTGTCGACAAAA GTCG GTT CGAC CATATCCTCTACAAT TERM 727 703018 - 702991 - R 100 -13.4 -3.94823 | opp_overlap 702991 702990 CATAAACGAGAACAA GCCGCGCATTCC TTTC GGAAAGCACGGC CTTCGTATGCAACTA TERM 728 702991 - 703018 + r 76 -11.2 -2.55668 | opp_overlap 702991, overlap 702990 CATAAACGAGAACAA GCCGCGCATTCC TTTC GGAAAGCACGGC CTTCGTATGCAACTA rpsU 703307 - 703092 - | 30S ribosomal protein S21 TERM 729 704688 - 704702 + G 70 -9.2 -3.551 | TTGAGTGTGTCGGTG CGGCCG CGG TGGCCG TTATCTGAGTTACCA gcp 703713 - 704726 + | O-sialoglycoprotein endopeptidase TERM 730 704743 - 704768 + T 100 -12.6 -3.47841 | overlap 704735 CAGAATGGCTGAGCG TGGCTGCGGC TGCGTT GCCGCAGTCA TTCTGATATGGGTGT TERM 731 704801 - 704820 + T 76 -10.7 -2.72661 | overlap 704790 AATGGCTGAGCGTGG CTGCGGC TGTGTT GCCGCAG TCATTCAAAATACTC TERM 732 704833 - 704855 + T 76 -2.7 -5.33921 | gap 1, opp_overlap 704833, overlap 704835 704836 CAGTCATTCAAAATA CTCA-TGGAC AAGA GTCCACTGCG TTTTTTCATTCCTTT TERM 733 704878 - 704936 + T 79 -11.1 -3.06696 | gap 1, overlap 704920 704927 ATTCCTTTGCGCCTT GCCTCGCTCATGCTCAGTCATTCTGATA TGGG TGTC-GAATGGCTGGGCGTGGCTGTGGC TGTGTTGCCGCAGCC TERM 734 704920 - 704959 + T 100 -12.1 -4.07885 | overlap 704878 704927 ATGGGTGTCGAATGG CTGGGCGTGGCTGTGGC TGTGTT GCCGCAGCCATTCTCGG TTTTGGGGAAAACTA TERM 735 704927 - 704952 + T 100 -12.6 -3.52113 | overlap 704878 704920 TCGAATGGCTGGGCG TGGCTGTGGC TGTGTT GCCGCAGCCA TTCTCGGTTTTGGGG YPO0647 705622 - 704972 - | putative glycerol-3-phosphate acyltransferase PlsY folB 705730 - 706089 + | bifunctional dihydroneopterin aldolase/dihydroneopterin triphosphate 2'-epimerase TERM 736 706299 - 706321 + F 100 -8.4 -5.77632 | opp_overlap 706299 AAATTCTAAATAGAA CGGCACTGTT TTC AGCATTGCCG TTTTTTTGTGGTTTT uppP 706363 - 707181 + | undecaprenyl pyrophosphate phosphatase TERM 737 707398 - 707380 - T 75 -8.8 -3.58343 | opp_overlap 707360 GGCAGGAGTCTGAAA CCCCTTGT TTT ACAGGGGG AAACGAACAGGGAGT cca 708655 - 707417 - | multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase TERM 738 708247 - 708225 - G 100 -12.7 -4.21275 | overlap 708236 CCAAGGTAGGCAAAA CGGGCGGCA AAGCG TGCCACCCG CAGAACGCGCAATGG YPO0651 709438 - 708815 - | putative signal transduction protein TERM 739 710524 - 710540 + G 73 -5.1 -4.64657 | overlap 710513 710526 CGCTTTGGCTATGGT TCGCCAA TCG TTGGCTA TTTTTGGCGGTTTGG YPO0652 709742 - 711049 + | hypothetical protein TERM 740 713688 - 713648 - g 82 -11.2 -3.73224 | gap 1 CTATTCGCCAGCAAA TTCTCTGCCGCCACCGCGA AGAT CCGCAGTTGCAGCAG-GAA GTCCGCGAAATGCGG glnE 711220 - 714075 + | bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase TERM 741 714400 - 714413 + G 70 -9.5 -3.18681 | ATATTGCCTCCCTTG GCGCG GTTG CGCGC TTAGTCGGGTTGACC rfaE 714210 - 715640 + | bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase TERM 742 715662 - 715645 - f 86 -12.7 -2.52464 | GCCGCGGCTAAGTCA GCGCCAG AGCG CTGGCGC ATAAGGATGTGGCAG TERM 743 715734 - 715752 + G 76 -5.2 -4.8048 | overlap 715735 GGGTTGTTATCCACT TCCCTGTT GGG GACGGGGG TTTTTGCTGTGCCAG asoB 715677 - 716927 + | inner membrane protein YjeH TERM 744 717047 - 717073 + T 72 -10.1 -2.88849 | gap 1, opp_overlap 717036, overlap 717042 717048 ACATCCATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCTCTGCC TERM 745 717048 - 717074 + T 84 -10.1 -3.82218 | gap 1, opp_overlap 717036, overlap 717042 717047 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCTCTGCCT YPO0656 717533 - 717252 - | hypothetical protein YPO0657 717689 - 717940 + | hypothetical protein ribB 718102 - 718755 + | 3,4-dihydroxy-2-butanone 4-phosphate synthase YPO0659 719214 - 719996 + | hypothetical protein TERM 746 720365 - 720401 + T 74 -10.3 -2.57564 | opp_overlap 720374, overlap 720364 720369 720373 GGCAATGACTTTGGG TATGGTAAAGGAAGGTG CAT TGCCTTCCCTTACTATA ATTATCCCAAAATAA YPO0660 721563 - 720403 - | hypothetical protein TERM 747 721577 - 721598 + r 73 -7.3 -4.23723 | gap 1 ATTAATCAGCCTTAG CCACC-CATG CTA CGTGTGGTGG TTTTGGATGATGTTG YPO0661 722259 - 721573 - | hypothetical protein YPO0662 722325 - 722495 + | hypothetical protein TERM 748 722527 - 722493 - T 100 -10.6 -5.09895 | overlap 722497 GAGGGAGGCAAAAAA TAAACCGGGCGCAGCC AAT GACTGTGCCCGGTGAA GCCAAACCGCTGACG TERM 749 722523 - 722497 - T 100 -15.8 -5.0666 | overlap 722493 GAGGCAAAAAATAAA CCGGGCGCAGCC AAT GACTGTGCCCGG TGAAGCCAAACCGCT tolC 723957 - 722560 - | outer membrane channel protein TERM 750 723342 - 723327 - G 74 -6.8 -4.30987 | opp_overlap 723340 ATTCGGGATAATAAA CACCAG TAAT CTGGCG CAAGCTCTCTAGTGC nudF 724353 - 724985 + | ADP-ribose pyrophosphatase NudF YPO0665 725019 - 725444 + | hypothetical protein icc 725526 - 726353 + | cyclic 3',5'-adenosine monophosphate phosphodiesterase YPO0667 726350 - 726934 + | esterase YqiA TERM 751 728245 - 728209 - g 90 -8 -5.00616 | opp_overlap 728209 728208, overlap 728213 GTGGTGCGTAAAAAA CTGACCAG-TGGCCCGGC ACT GCCTGGCAAACTGG-CAG ATTGTACTTCGCAGG parE 727036 - 728931 + | DNA topoisomerase IV subunit B crgA 728935 - 729846 + | LysR-family regulatory protein TERM 752 729897 - 729871 - T 100 -17.3 -4.4715 | GGGTAACGTATAAAA CGGCCCTCCCC AGAGA GAGGAGGGCCG AACCGCTTAGCTGTT mda66 730488 - 729904 - | putative modulator of drug activity TERM 753 731017 - 730990 - g 84 -4.8 -5.22039 | gap 1, overlap 730991 GCTAAATTCAAAAAA TCAGCCCGT-ACC GTG GGTGACGTGCTGG GTAAATATCATCCGC TERM 754 731016 - 730991 - g 70 -8.3 -3.72139 | gap 1, overlap 730990 CTAAATTCAAAAAAT CAGCCCGT-ACC GTG GGTGACGTGCTG GGTAAATATCATCCG TERM 755 731581 - 731545 - g 90 -8 -5.00616 | gap 1, overlap 731548 731550 GCGGTGTGGAAAAAA GAAGATGGCAGCGCCGT GATC ACGGCGTTACCA-CATC AGGTTTCCGGCGCGA TERM 756 731578 - 731548 - g 86 -8.3 -4.61482 | gap 1, overlap 731545 731550 GTGTGGAAAAAAGAA GATGGCAGCGCCGT GATC ACGGCGTTACCA-C ATCAGGTTTCCGGCG TERM 757 731577 - 731550 - g 86 -12 -3.91465 | overlap 731548 731545 GTGGAAAAAAGAAGA TGGCAGCGCCGT GATC ACGGCGTTACCA CATCAGGTTTCCGGC TERM 758 732005 - 732020 + G 74 -4.6 -4.81249 | opp_overlap 732004 732005 AAGATGATCCTAAAC CGCTAC TGAT GCAGCG TTTTTCCATTTCGGA parC 730792 - 733065 + | DNA topoisomerase IV subunit A TERM 759 733789 - 733766 - g 73 -3.2 -5.04987 | AACAGGTGCAAAAAA GAAACATC TCTATTTG GATGTTCC CAGAAGGCACACGCA parF 733354 - 734085 + | putative acyltransferase TERM 760 734120 - 734130 + F 75 -8.2 -3.89695 | overlap 734113 CAGGCTATCGCGGCC CCGC GCG GCGG TTATATTTATCGCCA TERM 761 734397 - 734408 + G 100 -7.2 -5.47399 | TATTAGAATCTCGCC GCGG CCAA CCGC TTTTTTTAACCTTGC sufI 734264 - 735688 + | repressor protein for FtsI TERM 762 735819 - 735831 + T 78 -9.1 -3.83409 | CGCATGTCTCGCTTG CCTGC TTC GCAGG TTTACTGATATGTAC TERM 763 736657 - 736633 - T 70 -5.8 -4.36914 | CTGCGGGTGAGAAAA TTACGGATAT TCAGG ATGTCCGTAA CACCGTTGTGATGCG TERM 764 738358 - 738328 - T 86 -7.7 -4.71061 | gap 1 ATCCAGAGGGAAAAA CAGGC-AGCATTAA GGGG TTATTGCTGGCCTG AAATCAGCGGTCAGA dkgA 739195 - 738362 - | 2,5-diketo-D-gluconate reductase A TERM 765 739240 - 739265 + H 71 -3.4 -4.99645 | overlap 739234 GTATTAGCCCGTTGC TGATAACG TAAGTTTAGT CGTTATCA TTTTATTTATGACCT YPO0677 739342 - 739551 + | hypothetical protein TERM 766 739530 - 739560 + T 93 -9.7 -4.2558 | opp_overlap 739527 GTATAAACAGGAGGA CTGGCAGCATGAC ATGCG GTAATGCCGCCAG TTTTGGTACGAGATA TERM 767 739621 - 739611 - T 76 -6.8 -4.55721 | AAATCTTACATAAAA CGGT TAT ACCG CCGCTTCATAGATAC YPO0678 740771 - 739614 - | putative iron-containing alcohol dehydrogenase TERM 768 740678 - 740695 + g 71 -6.9 -4.21631 | opp_overlap 740678 740676 CGTAGGTAATCAATA TCCGGGC ATCC GCCGGGA TTTCTTGAGTCAATT TERM 769 740870 - 740882 + H 80 -4.8 -5.17353 | CGTAACCACATCACT GTGC CTGGA GCAC TTTTTTCGTCAATAT YPO0679 741169 - 742062 + | AraC-family regulatory protein TERM 770 742107 - 742123 + T 75 -5.8 -4.65916 | opp_overlap 742107 AAGGCTTCATAGAAA CGGCGT ATTAG ATGCCG TTTTATTCACCTGGA YPO0680 742816 - 742154 - | putative DedA-family membrane protein metC 744220 - 743009 - | cystathionine beta-lyase TERM 771 744052 - 744076 + g 86 -5 -5.2696 | gap 1, overlap 744055 CATAGAACAACTCAC CATTGCCCCGA TTGA TCGTGGCA-TG TTTTTTCGCTTTTAC TERM 772 744055 - 744074 + g 74 -7.8 -4.24654 | overlap 744052 AGAACAACTCACCAT TGCCCCGA TTGA TCGTGGCA TGTTTTTTCGCTTTT YPO0682 745023 - 745736 + | MotA/TolQ/ExbB proton channel family protein YPO0683 745740 - 746171 + | biopolymer transport protein ExbD TERM 773 746172 - 746212 + T 93 -9.7 -4.32046 | opp_overlap 746172 746173, overlap 746173 AGCGGCGCAAAATAA TTTTTTGCAAGCGCGGTTA CTG TTACCGCGCTTGCATCAAC TTTGGTTTTTGAGGA TERM 774 746212 - 746172 - T 88 -9.7 -4.17316 | opp_overlap 746172 746173, overlap 746173 AGCGGCGCAAAATAA TTTTTTGCAAGCGCGGTTA CTG TTACCGCGCTTGCATCAAC TTTGGTTTTTGAGGA TERM 775 746211 - 746173 - T 95 -13.2 -3.09908 | opp_overlap 746172 746173, overlap 746172 GCGGCGCAAAATAAT TTTTTGCAAGCGCGGTTA CTG TTACCGCGCTTGCATCAA CTTTGGTTTTTGAGG TERM 776 746173 - 746211 + T 95 -13.2 -3.18505 | opp_overlap 746173 746172, overlap 746172 GCGGCGCAAAATAAT TTTTTGCAAGCGCGGTTA CTG TTACCGCGCTTGCATCAA CTTTGGTTTTTGAGG YPO0684 747824 - 746268 - | hypothetical protein TERM 777 747800 - 747780 - G 87 -4.8 -5.45652 | overlap 747781 ATTTTTAATAAAAAA CTCATACT TCTCT AGTATGAA AGTTATCATTGTTTT YPO0685 748355 - 747849 - | hypothetical protein YPO0686 748875 - 748405 - | hypothetical protein YPO0687 749609 - 748875 - | hypothetical protein TERM 778 749617 - 749603 - G 80 -4.3 -5.0916 | CGCTTAACAGAAAAA TCATC ACTGG GATGA TAATAATAGTATTAA YPO0688 750462 - 749629 - | hypothetical protein TERM 779 749838 - 749861 + g 86 -8.2 -4.67563 | opp_overlap 749837 749835 749838, overlap 749837 AGCCAAAACTAATAC TGTATTGCAG TGTG CTGCAAAACA TTTTCATTTCTATTG YPO0689 751334 - 750459 - | hypothetical protein YPO0690 752617 - 751331 - | putative type II secretion protein YPO0691 753861 - 752629 - | hypothetical protein TERM 780 753208 - 753237 + g 100 -4.3 -5.96894 | overlap 753210 GAGATCTTGCGAGCC TTGATTGCCTTGT AATA ACAAGGTAGGCGA TTTTTTTATTTGGGT TERM 781 754429 - 754412 - R 71 -9.1 -3.34895 | CGTATGCGTAATGAA GGGTAGG AGTC CCCACCC CTAAGATTAAATACC TERM 782 754855 - 754869 + r 80 -10 -3.57418 | opp_overlap 754854 754853 ATTTTATTAATAACC CCCTGA TAC TCAGGG TTGCTTTGATAACTC YPO0694 756235 - 755369 - | hypothetical protein YPO0695 756709 - 756287 - | hypothetical protein TERM 783 756331 - 756346 + g 73 -5.4 -4.70659 | gap 1 CAGTGATAGCAACGG CGTAGGG AAC CCC-ACG TTTTTGGATATCAAC TERM 784 756761 - 756735 - H 81 -9.5 -3.8594 | opp_overlap 756737, overlap 756737 AATAGTGAGATGAAA GATATGGCAGC AGATG GCTGCCATATT TATTGTGCCCAGAAA TERM 785 756737 - 756759 + H 100 -12.1 -4.30719 | opp_overlap 756737 756735 TAGTGAGATGAAAGA TATGGCAGC AGATG GCTGCCATA TTTATTGTGCCCAGA TERM 786 756759 - 756737 - H 91 -12.1 -3.51034 | opp_overlap 756737, overlap 756735 TAGTGAGATGAAAGA TATGGCAGC AGATG GCTGCCATA TTTATTGTGCCCAGA TERM 787 756778 - 756796 + H 100 -16 -3.07307 | opp_overlap 756778 ATTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC TERM 788 756796 - 756778 - H 100 -16 -4.37092 | opp_overlap 756778 ATTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC tnp 756909 - 757367 + | transposase for the IS1541 insertion element TERM 789 757445 - 757469 + F 93 -9.9 -4.30719 | opp_overlap 757448, overlap 757447 757448 ATAGGCGCATATGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTGTGCCCAGA TERM 790 757447 - 757467 + F 100 -12.5 -3.75817 | opp_overlap 757448, overlap 757445 757448 AGGCGCATATGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTGTGCCCA TERM 791 757466 - 757448 - f 100 -16 -4.8048 | opp_overlap 757448 757447 757445 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTGTGCCC TERM 792 757448 - 757466 + F 100 -16 -2.85008 | opp_overlap 757448, overlap 757447 757445 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTGTGCCC TERM 793 757488 - 757506 + F 100 -16 -3.07307 | opp_overlap 757488 ATTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC TERM 794 757506 - 757488 - f 100 -16 -4.37092 | opp_overlap 757488 ATTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC tnp 757619 - 758077 + | transposase for the IS1541 insertion element TERM 795 758155 - 758179 + F 93 -9.9 -4.38927 | opp_overlap 758158, overlap 758157 758158 ATAGGCGCATATGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTCTATGAAAA TERM 796 758157 - 758177 + F 100 -12.5 -3.79864 | opp_overlap 758158, overlap 758155 758158 AGGCGCATATGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTCTATGAA TERM 797 758176 - 758158 - f 100 -16 -4.8048 | opp_overlap 758158 758157 758155 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTCTATGA TERM 798 758158 - 758176 + F 100 -16 -2.87195 | opp_overlap 758158, overlap 758157 758155 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTCTATGA YPO0698 758430 - 760910 + | outer membrane usher protein TERM 799 761148 - 761126 - g 74 -4.1 -4.93316 | GAACAACAGCAAAAA GTCACCACC CCGTT AGTGGCAAC GCCACCAGTTCAGCG YPO0699 760928 - 761647 + | fimbrial chaperone protein TERM 800 762126 - 762114 - g 73 -6.3 -4.5448 | CAGGGACAAAAATAA CGATT GCT AATCG AGTCACGGTCCAACT YPO0700 761672 - 762778 + | Fimbrial protein TERM 801 762961 - 762978 + T 71 -4.1 -4.87786 | TGTCAATAACCTCAA GCGAC CAATAAGT GTCGC TTTTTATGCCGTTAG YPO0701 764003 - 762990 - | iron-enterobactin transporter periplasmic binding protein TERM 802 764940 - 764950 + G 91 -3.2 -5.72616 | ATGAATATTCTTTCC CTAC GCG GTGG TTTTTTTCTGTGGAT YPO0702 764925 - 765920 + | hypothetical protein TERM 803 765986 - 765951 - T 100 -12 -4.39426 | opp_overlap 765948 765947 TACAGGGCCATAAAA TCGCCACAGTAATC TCATACTC GCTTACTGTGGCGA TCCCTCTTCTTCCGT YPO0703 766581 - 766012 - | putative lipoprotein TERM 804 767736 - 767750 + r 84 -10 -3.74178 | overlap 767728 767730 767744 TCGCACGCCGCGTAG CCGTTG GTT CAACGG TTTACCCTTTGATTC flhB 770010 - 768877 - | flagellar biosynthesis protein FlhB TERM 805 769338 - 769355 + g 73 -2.7 -4.94243 | TTTTATGCTCTTGTT TGACC TCCTGTTT GGTCA TTTTCATTTTTTTGG TERM 806 769967 - 769977 + g 74 -4.6 -4.76312 | overlap 769960 769957 GCTTTCGACAGCTTC CCCG CTG TGGG TTTTTCACTCTTCTC fliR 770783 - 770010 - | putative flagellar assembly protein fliQ 771059 - 770790 - | putative flagellar assembly protein fliP 771834 - 771064 - | flagellar biosynthesis protein FliP fliN 772244 - 771831 - | flagellar switch protein TERM 807 771875 - 771887 + g 70 -3.4 -4.90266 | opp_overlap 771875 TATTGATGTTAATAA TACG CAGGC CGTA TTTTTCATTAATCAC fliM 773148 - 772237 - | putative flagellar motor switch protein TERM 808 772478 - 772498 + g 88 -3.9 -5.67967 | ACTAAGTGTTCAAGT TGCCTCTCT GAC AGTGAGACA TTTTTTTCTACTGCT TERM 809 772713 - 772726 + g 76 -3.1 -5.1361 | AGAGATCGGTTATTT CAAGC CCGA GTTTG TTTTTTAGCCTTTCT TERM 810 774242 - 774258 + G 74 -7.3 -4.258 | GGCCAGAGGATATTC TGCCTTT GGT GAAGGCA TTTATTAATAAGTAC flbD 773659 - 774687 + | sigma-54 transcriptional regulatory protein fliE 774704 - 775084 + | putative flagellar hook-basal body complex protein fliF 775094 - 776734 + | flagellar MS-ring protein fliG 776706 - 777749 + | flagellar motor switch protein G TERM 811 777786 - 777768 - g 82 -3.8 -5.252 | overlap 777770 GATGTTGATAAAAAA TACCCC ACGGGCG GGGGCA GTGAAACTGCGGGTT TERM 812 778432 - 778442 + G 73 -3.2 -5.00616 | CAATGCATTGGTGCG TTGC ACA GCAG TTTTTTGACGGAACC fliH 777751 - 778470 + | flagellar assembly protein H TERM 813 778517 - 778537 + G 77 -11.8 -3.15544 | opp_overlap 778513 ATCGAAAACATTCAT CTGGCCCG AGTGG CGGGCCGG TTAGTGCGAGTGACG fliI 778463 - 779803 + | flagellum-specific ATP synthase YPO0718 779816 - 780190 + | hypothetical protein TERM 814 780221 - 780250 + T 100 -15.9 -5.4833 | opp_overlap 780221 GCGACCATAAAAAAA TCCGTCATAGGGA ATAT TCTCTATGACGGA TTTTTTATTGGGTGG TERM 815 780250 - 780221 - T 100 -13.7 -5.67063 | opp_overlap 780221 GCGACCATAAAAAAA TCCGTCATAGGGA ATAT TCTCTATGACGGA TTTTTTATTGGGTGG YPO0719 780841 - 780518 - | hypothetical protein YPO0720 781216 - 780950 - | putative flagellar regulatory protein flgA 782158 - 781445 - | flagellar basal body P-ring biosynthesis protein FlgA TERM 816 781506 - 781523 + g 76 -3.3 -5.17576 | overlap 781507 ACCGTGGCGGTCACC ACTCGGC CACT GCTGAGG TTTTTTACCTTGATA flgB 782351 - 782797 + | flagellar basal body rod protein FlgB flgC 782800 - 783225 + | flagellar basal body rod protein FlgC flgD 783228 - 783884 + | flagellar basal body rod modification protein TERM 817 784296 - 784312 + G 70 -11.5 -2.62184 | opp_overlap 784287 AAATTACAGGGCTAC CCGGCGG ATG CTGCCGG TAATATCCAGGCGGG flgE 783939 - 785180 + | flagellar hook protein FlgE TERM 818 785326 - 785302 - T 100 -9.9 -4.42806 | opp_overlap 785305, overlap 785304 785305 TGATCTGGAAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCATATGCGCCTAT TERM 819 785324 - 785304 - T 100 -12.5 -3.81958 | opp_overlap 785305, overlap 785302 785305 ATCTGGAAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 820 785323 - 785305 - T 100 -16 -2.88452 | opp_overlap 785305, overlap 785304 785302 TCTGGAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 821 785305 - 785323 + T 100 -16 -4.8048 | opp_overlap 785305 785304 785302 TCTGGAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC tnp 785862 - 785404 - | transposase for the IS1541 insertion element TERM 822 785993 - 785975 - H 100 -16 -3.07307 | opp_overlap 785975 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 823 785975 - 785993 + H 100 -16 -4.36914 | opp_overlap 785975 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 824 786040 - 786011 - H 70 -3.5 -4.82901 | opp_overlap 786015, overlap 786012 786015 TTCTGGGCACAAAAA GCCACCGCC ACCCAGGTCATG GGCGGTGGT TATAGCAGCCGTGTC TERM 825 786039 - 786015 - H 70 -9.2 -2.88667 | opp_overlap 786015, overlap 786012 786011 GGGCACAAAAAGCCA CCGCCACCCA GGTCA TGGGCGGTGG TTATAGCAGCCGTGT TERM 826 786015 - 786039 + H 74 -9.2 -3.29263 | opp_overlap 786012 786015 786011 GGGCACAAAAAGCCA CCGCCACCCA GGTCA TGGGCGGTGG TTATAGCAGCCGTGT TERM 827 786152 - 786142 - H 70 -5.4 -4.57073 | TATTGCCCTTAAAAA TCAG GGG CTGA TCGCGGTGCTCAGTG TERM 828 786438 - 786412 - H 75 -5.9 -4.73105 | gap 1 ACTCAGAAAAAACAA CCGCGGTTTACT GGTC AGTAA-CCGTGG CCCGGCGGCCCGTGA flgG 786690 - 787475 + | flagellar basal body rod protein FlgG TERM 829 787991 - 787975 - g 79 -7.3 -4.56775 | ATCCGTGGCGAAAAA TGGCTGA CCC TCAACCA AGGCGATGAATATAT flgH 787510 - 788175 + | flagellar basal body L-ring protein TERM 830 788943 - 788971 + G 71 -6.6 -4.14541 | gap 1, opp_overlap 788953 ACGTTATGGTCAATG CGCCACAAGACGC CGGT GCG-CGCGTGGCG TTTATGTCATTGCTG flgI 788252 - 789364 + | flagellar basal body P-ring protein TERM 831 789418 - 789395 - g 74 -7.4 -4.26871 | gap 1, opp_overlap 789397 789398, overlap 789396 789398 GAAGCCATTAATAAA TCATCCCCGGT GAT ACCGGGGA-GT TTTGTCGGTGACCTC TERM 832 789417 - 789396 - g 71 -10.9 -3.154 | gap 1, opp_overlap 789397 789398, overlap 789395 789398 AAGCCATTAATAAAT CATCCCCGGT GAT ACCGGGGA-G TTTTGTCGGTGACCT TERM 833 789397 - 789417 + G 91 -11.1 -4.42653 | opp_overlap 789396 789395 789398, overlap 789398 AGCCATTAATAAATC ATCCCCGGT GAT ACCGGGGAG TTTTGTCGGTGACCT TERM 834 789416 - 789398 - g 86 -14.6 -3.12942 | opp_overlap 789397 789398, overlap 789396 789395 GCCATTAATAAATCA TCCCCGGT GAT ACCGGGGA GTTTTGTCGGTGACC TERM 835 789398 - 789416 + G 86 -14.6 -3.2511 | opp_overlap 789398 789396 789395, overlap 789397 GCCATTAATAAATCA TCCCCGGT GAT ACCGGGGA GTTTTGTCGGTGACC flgJ 789374 - 789667 + | peptidoglycan hydrolase flgK 789780 - 791141 + | flagellar hook-associated protein FlgK TERM 836 791944 - 791931 - g 80 -2.4 -5.44721 | ATTACTGCAAAAAAA CCAT GAAGAG ATGG AGCTGTCGAATGCCA flgL 791170 - 792093 + | flagellar hook-associated protein FlgL YPO0734 792138 - 793118 + | hypothetical protein TERM 837 793199 - 793232 + T 82 -6 -5.00616 | gap 1, overlap 793200 793201 TACCCGTTATTCTTC AAGCTG-CATGTGCG TTGAT CGCACATGTCAGCCG TTTTTTCAGCCCCAG TERM 838 793200 - 793231 + T 78 -9.5 -3.60048 | gap 1, overlap 793199 793201 ACCCGTTATTCTTCA AGCTG-CATGTGCG TTGAT CGCACATGTCAGCC GTTTTTTCAGCCCCA TERM 839 793201 - 793230 + T 91 -13 -2.75708 | gap 1, overlap 793200 793199 CCCGTTATTCTTCAA GCTG-CATGTGCG TTGAT CGCACATGTCAGC CGTTTTTTCAGCCCC YPO0735 793605 - 793282 - | hypothetical protein YPO0736 794755 - 793709 - | putative regulatory protein TERM 840 794432 - 794420 - G 71 -5.5 -4.43859 | GATAATTTCACAAAA GCTGG CAT CCAAC AGATAACCTATCTTG TERM 841 795226 - 795210 - H 72 -7.3 -3.99805 | opp_overlap 795210, overlap 795215 795219 TCTTAAAAATTTAAA GCAGATT AAT AACCTGC GTTATTAAAATACTA flaA1 795381 - 796595 + | putative flagellin TERM 842 796622 - 796641 + F 81 -9.3 -3.87815 | CCTTCGCGTTGCAGG GGGGGTA CTCAGT TACCCCC TTTCTGCCACTCGAA TERM 843 796913 - 796932 + F 100 -8.6 -5.60689 | opp_overlap 796913 CCATTAATAAATCGA TACCGCTT CCTG GAGCGGTA TTTTTTATTGTATAC flaA2 797110 - 798309 + | putative flagellin TERM 844 798335 - 798354 + F 81 -9.3 -3.87815 | TCCTTCGCGTTGCAG GGGGGTA CTCAGT TACCCCC TTTCTGCCACTCGAA TERM 845 798395 - 798414 + F 100 -8.6 -5.60689 | opp_overlap 798395 CCATTAATAAATCGA TACCGCTT CCTG GAGCGGTA TTTTTTATTGTATAC flaA3 798592 - 799797 + | putative flagellin TERM 846 799841 - 799865 + F 73 -5.8 -4.41844 | gap 1, opp_overlap 799843, overlap 799843 GCCATGAACTTAATC GA-TACCGCTT TTCG GAGCGGTATTC TTTTATCAACGTTTT TERM 847 799843 - 799862 + F 82 -8.6 -4.31397 | opp_overlap 799843, overlap 799841 CATGAACTTAATCGA TACCGCTT TTCG GAGCGGTA TTCTTTTATCAACGT fliD 800017 - 801294 + | putative flagellar hook-associated protein fliS 801304 - 801684 + | putative flagellar protein YPO0742 801686 - 802012 + | hypothetical protein YPO0743 802014 - 803195 + | putative flagellar hook-length control protein TERM 848 803270 - 803252 - g 86 -9 -4.51224 | overlap 803248 AAGACTAAGAAGAAA GTATTTTC GCC GAAAATAC GGGCATTCCTATTGC YPO0744 803234 - 803704 + | putative flagellar biogenesis protein fliA 803710 - 804405 + | flagellar biosynthesis sigma factor TERM 849 804643 - 804663 + G 70 -9.1 -3.55814 | opp_overlap 804632, overlap 804630 804646 TATACGGTTGAGTTT CAACAGCAA TTA TTGTTGTTG TTGTATGAATTGCTG motA 804421 - 805287 + | flagellar motor protein MotA TERM 850 805814 - 805825 + G 73 -5.8 -4.5123 | overlap 805800 CCAGCGCAGTAGTGC GGTG TTAA CACC TTTCTTTAGTCGGTT motB 805287 - 806198 + | hypothetical protein TERM 851 806413 - 806427 + G 78 -6.4 -4.80455 | opp_overlap 806413 CGTGTCAATTTTAAA TCGGTT TCT GACCGA TTTTCTCTTTCGCTG YPO0748 806267 - 806455 + | hypothetical protein TERM 852 806819 - 806805 - g 80 -4.3 -5.18357 | CAACTCACCAAAAAA CAAGA CGTTT TCTTG GATGGCGAGAAAGTC TERM 853 807105 - 807080 - g 82 -4.1 -5.35459 | gap 1, opp_overlap 807078 807080 807082, overlap 807082 AGACACGATAAAAAA TATTAC-TCTGC ATG GCAGAAGTAATG TGTCTTTCTTTATGG TERM 854 807103 - 807082 - g 74 -6.7 -4.30057 | gap 1, opp_overlap 807080 807078 807082, overlap 807080 ACACGATAAAAAATA TTAC-TCTGC ATG GCAGAAGTAA TGTGTCTTTCTTTAT YPO0749 806658 - 807254 + | hypothetical protein TERM 855 807645 - 807659 + G 87 -4.4 -5.49579 | opp_overlap 807645 ACATTATATCAACAG TAATAA GTT TTATTA TTTTATTTTTTCTGA YPO0750 807251 - 807706 + | hypothetical protein TERM 856 807784 - 807807 + G 74 -9.7 -3.6393 | opp_overlap 807780, overlap 807762 807782 GATTACAATATGTGA GCATTGTCT TATTTC AGACAATGC TATTTCTCTGCTACG TERM 857 807961 - 807977 + G 74 -6.5 -4.31837 | ATGATGCCGGATACT CAGCCTT CGT ATGGCTG TTTGTTCCCTTTCTT YPO0751 807780 - 808061 + | hypothetical protein TERM 858 808688 - 808678 - T 70 -5.4 -4.49316 | opp_overlap 808678, overlap 808674 AGCAGCAAGAATAAA TGGT TTA ACCA TGGTGTAGCCCCTTT YPO0754 809241 - 808939 - | hypothetical protein TERM 859 809002 - 809029 + g 100 -7.2 -5.78622 | opp_overlap 809002 TAGTAATATACTTAA CAGATTCAAAAA TTGA TTTTTAAATCTG TTTTTTTTCAAATAA TERM 860 809219 - 809231 + g 91 -2.7 -5.73672 | CAAAAAATATAATAA CAATG TAC TATTG TTTTTTTCATTATTT TERM 861 809661 - 809647 - H 95 -9.2 -4.46267 | opp_overlap 809647 AGAAGGCAAGGAAAA CGGGCA GGA CGCCCG TTTTAGGCGTCACGC TERM 862 809647 - 809661 + H 79 -8.5 -4.11216 | opp_overlap 809647 AGAAGGCAAGGAAAA CGGGC AGGAC GCCCG TTTTAGGCGTCACGC TERM 863 809725 - 809694 - H 76 -9.4 -3.54543 | gap 1, overlap 809713 AGGGACCCGCGTAAA GCCGTCCGCCAGCCG AAA CGA-TGACGGAGGGC ATCCACGCAGTGGAC TERM 864 809791 - 809837 + H 100 -15.4 -3.05384 | gap 1, opp_overlap 809775 809796, overlap 809796 809801 GGGTCACGCGCTGCA CTGAACC-CCAGATCTTGGAT CTTTTT ATCCATGATCTGGAGGTTCGG TTCAATGAAACACCC TERM 865 809796 - 809832 + H 77 -10.3 -3.19192 | gap 1, opp_overlap 809775 809796, overlap 809791 809801 ACGCGCTGCACTGAA CC-CCAGATCTTGGAT CTTTTT ATCCATGATCTGGAGG TTCGGTTCAATGAAA TERM 866 809831 - 809796 - H 93 -12.7 -3.05463 | opp_overlap 809791 809796 809801, overlap 809775 ACGCGCTGCACTGAA CCCCAGATCTTGGAT CTTTTT ATCCATGATCTGGAG GTTCGGTTCAATGAA TERM 867 809801 - 809811 + H 75 -5.4 -4.88736 | opp_overlap 809796, overlap 809796 809791 CTGCACTGAACCCCA GATC TTG GATC TTTTTATCCATGATC YPO0755 809842 - 810357 + | insertion element DNA-binding protein TERM 868 811177 - 811159 - g 71 -11 -2.73735 | overlap 811149 811147 811170 AAACAGGCGGAATGA GTCCGGCA GAA TACCGGAC TCAGGTAGAAAAGCA YPO0756 810411 - 811196 + | transposase for insertion sequence IS1661 TERM 869 812581 - 812556 - f 88 -3.3 -5.85737 | gap 1, overlap 812561 812565 ATATGAATAAAAAAA CG-AAAGTGACT ATG AGCCACATTGCG GCCAAAGCGGGAGTA TERM 870 812575 - 812561 - f 74 -6.4 -4.57518 | overlap 812556 812565 AATAAAAAAACGAAA GTGACT ATG AGCCAC ATTGCGGCCAAAGCG TERM 871 812720 - 812708 - g 75 -9.1 -3.87815 | GGCTATGTCCATAAA GCCGT GGA ACGGC CCATTGCCAGAGATA YPO0758 812567 - 813562 + | LacI-family regulatory protein YPO0759 813844 - 815214 + | Sodium:sulfate symporter-family protein TERM 872 815251 - 815272 + T 86 -10.2 -3.86346 | opp_overlap 815251 TACGCCGTCAGGGAA TTAGGCCC CTGCAT GGGCCTAA TTTATGGGGCAATGA TERM 873 815272 - 815251 - T 76 -10.2 -3.05596 | opp_overlap 815251 TACGCCGTCAGGGAA TTAGGCCC CTGCAT GGGCCTAA TTTATGGGGCAATGA YPO0760 815807 - 815394 - | hypothetical protein TERM 874 815744 - 815757 + g 79 -6.7 -4.59773 | TGCCGGAGACAACTT TCTGG CTAT CCAGA TTTTTCAAAGTAAGA YPO0761 816593 - 816351 - | hypothetical protein YPO0762 821184 - 816868 - | hypothetical protein TERM 875 819061 - 819043 - G 73 -5.2 -4.60889 | overlap 819045 AATGACCCGCAAAAA GCCCCATG CAT CATAGGCC AGTTCCGTGCGCTGC YPO0763 822517 - 821198 - | hypothetical protein YPO0764 824768 - 822543 - | hypothetical protein TERM 876 822730 - 822760 + g 70 -9 -3.63228 | AGCGTAATACTGGTG CCGGCGGTGATA GTGATTG TGTCACCGACGG TTAATTTATCGTGCC TERM 877 822821 - 822834 + g 84 -2.3 -5.58454 | TCTTGGATTTTTTAT AACCC TCGA GGGTA TTTTTTTGATATCCG TERM 878 825303 - 825335 + r 76 -9.2 -3.57144 | TTAGGTTATTTATTA GGGTATCAGTACCC TCACT GCATACTGATACCC TTTACGCATAAAAAC TERM 879 826578 - 826598 + r 76 -11.1 -2.50816 | opp_overlap 826578, overlap 826577 GTTCACCCGAACCGA GGTGGTGCC GGT GGCATCGCC GTTGATCACTAACCG TERM 880 829596 - 829606 + r 75 -3.2 -5.14626 | TTCCTTACCCTACGT CGTT TCG AGCG TTTTATTTTCGTGAT gntP 831461 - 830118 - | fructuronate transporter TERM 881 831144 - 831117 - G 74 -7 -4.42788 | gap 1 GGCAACCTCATAAAA CATC-GCCAGACC AAA GATCAGGCCGATG ATAATTACCGCGGCT TERM 882 831781 - 831759 - H 83 -11.4 -2.94912 | opp_overlap 831763, overlap 831763 GCGGCAAGCGAGAGA CAAATGGGTC TGG AACCCATTTG AACCGCATTTATGTT YPO0768 833001 - 833399 + | hypothetical protein TERM 883 833641 - 833621 - f 84 -9.9 -3.75933 | overlap 833638 ATATATGTTATTAAA TATGCTTAA CTA TTAAGCATA AAATAATATAAATAG YPO0769 833835 - 834710 + | hypothetical protein YPO0770 836790 - 835033 - | ABC-transporter transmembrane protein TERM 884 835987 - 835975 - G 70 -9.1 -3.52079 | CAATACTTCAGACAA GGGGA TCC TCCCC CCTACCCAGCCCCAG TERM 885 836064 - 836076 + g 74 -4.7 -4.87786 | overlap 836073 TAAAACTGTAGATCG GCCAG ACA CCGGC TTTTTCTGCCGTTAA TERM 886 836318 - 836301 - G 79 -11.3 -3.60971 | opp_overlap 836295 AGGGTAACGTTGAAA GCATGGC TAAC GCCATGC GCCAATCTTTTAGCA YPO0771 838555 - 836783 - | ABC-transporter transmembrane protein TERM 887 837771 - 837748 - G 100 -9.6 -5.00616 | CCCCTTGGGAAAAAA GCATGATGCC AACA GGCATAATGC ACAATAAACCGAGAT TERM 888 838134 - 838085 - G 83 -2.9 -5.38326 | gap 2, overlap 838093 CCAATCAAAGAAAAA CAGTAAAATGGCGGCAGCAATAG GCGTGA CAATTGCCGCCGCCATA-T-CGG GTAAATGGTGAGCCA TERM 889 838128 - 838093 - G 100 -15.5 -4.62102 | overlap 838085 AGAAAAACAGTAAAA TGGCGGCAGCAATAG GCGTGA CAATTGCCGCCGCCA TATCGGGTAAATGGT YPO0772 839859 - 838555 - | hypothetical protein TERM 890 839318 - 839302 - G 100 -6.5 -5.29445 | CTGTAACAACAAAAA CCACCAC ACG GTGACGG ACCACCCCCAAACAC TERM 891 839555 - 839539 - G 73 -2.9 -5.00616 | CTCTGGCGCAAAAAA CCATAGC AGC GTCATGG CAATCAAAGAGCACA YPO0773 840613 - 839849 - | putative thioesterase TERM 892 839967 - 839955 - G 76 -3.3 -5.1244 | TGATTAAGATAAAAA TGCCC ACC GGGGA ACACCTGTAGCCGAA TERM 893 840183 - 840198 + g 70 -4.6 -4.64676 | overlap 840184 TAGTCCAATGTGCTG CCACCC AATT GGGTGA TTTTGTTCAAGATAC YPO0774 841733 - 840606 - | hypothetical protein TERM 894 840664 - 840642 - G 100 -9.8 -4.99035 | CCATTGAGATAAAAA TGTCGCCACC TTA GGTGACGCCA TCATCGGTTCGACAA YPO0775 842806 - 841730 - | hypothetical protein YPO0776 848622 - 842803 - | putative siderophore biosysnthesis protein TERM 895 844890 - 844872 - G 70 -3.2 -4.78107 | opp_overlap 844872 GACCATCAGGAAAAA GAAGAT TGAGGGG ATCTTC TTTGCCCTGTAAGAG TERM 896 846136 - 846120 - G 79 -12.3 -3.19192 | CTGGAGGTAAGTTAA CGGGGAT CCA ATCCCCG GAAAGCAAGATATAA TERM 897 847033 - 847009 - G 83 -9.9 -4.21933 | TGAATGCCAAAACAA GGGCGAGTCAC AAA GTGCCTCTCCC GTGCCGACCTCCTCC TERM 898 847360 - 847374 + g 79 -11.4 -3.61398 | AACGATGGGCATTCT GGCGTG CCC CACGCC TTGTTGCCGCCCCCA YPO0777 850287 - 848635 - | putative siderophore biosysnthesis protein TERM 899 850325 - 850306 - R 81 -10.8 -3.34398 | opp_overlap 850304 850296 850318, overlap 850304 TTGCTCGTGTAAATA CTGTGCAA GCCG TTGCACAG CGTGTTCAAGTTGTT YPO0778 856936 - 850331 - | putative siderophore biosysnthesis protein TERM 900 852619 - 852598 - G 77 -10.2 -3.53012 | TCCCTCCGTGGCAAA GGGATTGC AGCATG GCAATCCC CTCAGGCAGGGCATC TERM 901 854730 - 854742 + g 79 -9.1 -4.13767 | opp_overlap 854730 854729 854711 ACTTGCTGCCAAAAG CCCTG ATG CAGGG TTTTGGCCTCAAAAG TERM 902 854782 - 854804 + g 72 -9.8 -3.41051 | opp_overlap 854781 854780 GGACACCCGATAACG GCTGTTGGCG ATG CGCCAGCACC TTGTCATCCACATAC TERM 903 855812 - 855798 - G 75 -9.2 -3.90586 | opp_overlap 855805 855808 ATACGATGGGATAAA CGCGCC CGT AGCGCG TAGCGCTCCTTTGCA TERM 904 856578 - 856589 + g 71 -7.2 -4.07568 | GCCAACCATTGTTTG GGCG ATTG CGCC TTTTCAAAGCGACAG YPO0779 857779 - 856997 - | transposase/IS protein TERM 905 857695 - 857709 + g 77 -11.4 -3.3506 | overlap 857708 CTGCCTGTTGTGACA GCGCAG GCG CTGCGC TTATAAGGCTTTCCA y1093 858798 - 857776 - | transposase for insertion sequence IS100 TERM 906 858820 - 858802 - R 100 -13.2 -4.01078 | AAAAGTGACCATAAA CTCTCCTG AAT CAGGAGAG CAGATTACCCCCTGG TERM 907 859203 - 859215 + r 77 -4.9 -5.04601 | TTATTAGTGATCTTT GTTTT ATA AAAAC TTTTTGCTTTCTAAG YPO0782 859486 - 859268 - | hypothetical protein TERM 908 859385 - 859400 + g 74 -4.7 -4.82901 | AAATACAGGGAGGTC TGCGA TACGAC TCGCA TTTTTATCGGAAGAC TERM 909 859507 - 859489 - R 86 -8.8 -4.36485 | ATAAAAGACGCAAAA CGGAGCCA TTA CAGCTCCG ATATGAAGATTAAAT thyA 860311 - 859517 - | thymidylate synthase TERM 910 859889 - 859868 - G 82 -7.3 -4.6902 | gap 1, opp_overlap 859868 859877, overlap 859872 GTAGAACTGGAAAAA GGCA-TGGCA TGG TGCCAACGCC ATTTGATCCAGTTCG lgt 861190 - 860318 - | prolipoprotein diacylglyceryl transferase ptsP 863687 - 861441 - | fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain TERM 911 863527 - 863497 - G 76 -12.5 -2.62983 | opp_overlap 863497 863498, overlap 863486 GCCAGCGTGATAGTA CGCCCACGGGGCT TTTTC AGCCCCCTGGTCG CCATTAGGTAGTAAC TERM 912 863498 - 863508 + g 82 -8.2 -4.57073 | opp_overlap 863486 863497, overlap 863497 CCAGCGTGATAGTAC GCCC ACG GGGC TTTTTCAGCCCCCTG YPO0786 864227 - 863700 - | dinucleoside polyphosphate hydrolase YPO0787 864504 - 864253 - | hypothetical protein YPO0788 864692 - 864501 - | hypothetical protein TERM 913 864647 - 864637 - G 83 -5.4 -5.10497 | AAGTTACGCAAAAAA GAGT AAA ACTC GCAAAAAAGCCTCTC TERM 914 864670 - 864656 - G 78 -3.5 -5.08011 | AAAACTCGCAAAAAA GCCTC TCGTC AAGGC TGTAAATTGAACCAG TERM 915 865216 - 865189 - g 71 -5.6 -4.49389 | gap 1 AGTGCACAAGGAAAA CCACTGGAAACGA CAT TCGTCTGC-GTGG CACCACTCACCGGGA mutH 864925 - 865611 + | DNA mismatch repair protein TERM 916 865717 - 865697 - f 77 -8.3 -3.96298 | TAGTGATTAATTAAA GCGGGAT GTTCTCT ATCCCGC AGGTGCTTTATATCT TERM 917 866183 - 866171 - g 71 -10.5 -3.1733 | overlap 866169 866168 CGCTGGATAAAAGCA CGCGG TTG CCGCG AAAAAATTATTTTAG TERM 918 866834 - 866845 + G 74 -7.2 -4.16842 | overlap 866818 GCTCTGGCCTTTGTG CGGC AACA GCCG TTTGTTGCCAGTACG tas 865946 - 866986 + | putative aldo-keto reductase TERM 919 867041 - 867026 - T 91 -11.8 -3.43203 | opp_overlap 867021 867020 CTATCATAATATGAA GGCCGC TGAT GCGGCC TTGAGGTTATTGACA TERM 920 867121 - 867147 + T 70 -7.2 -3.74872 | gap 1, opp_overlap 867109, overlap 867120 CATCCATGTAGGCTC GAG-CCGCGCC CTCCCT GGCGCGGACGC TTTACTCCCCTGCCT TERM 921 867204 - 867233 + T 100 -16.5 -3.02511 | CGGGGTTTGTCAGCA TTCTGAAGGCCGC TGAT GCGGCCTTCAGGG TATTGACAAAGTGCC YPO0791 867788 - 867363 - | hypothetical protein TERM 922 867898 - 867949 + r 83 -11.8 -2.69964 | gap 1, opp_overlap 867918, overlap 867915 TTTCAAAAGGCGATA TTTGTCAGCAGTCTGAA-GGATCTC CTT GAGATCCTTTCAGATGACAGACAAA TCATATCATTCAGGC TERM 923 867915 - 867931 + r 84 -10.9 -3.59979 | opp_overlap 867918, overlap 867898 TGTCAGCAGTCTGAA GGATCTC CTT GAGATCC TTTCAGATGACAGAC ygeD 869175 - 867955 - | hypothetical protein TERM 924 868373 - 868352 - G 87 -10.1 -4.38712 | gap 1, overlap 868353 TTTAGCGTCACAAAA CGGGCGGCGG CAC CCG-CGCCCA CCACAATCCCAATCG TERM 925 868372 - 868353 - G 76 -11.4 -3.22906 | gap 1, overlap 868352 TTAGCGTCACAAAAC GGGCGGCGG CAC CCG-CGCCC ACCACAATCCCAATC aas 871328 - 869172 - | bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase TERM 926 871460 - 871443 - R 100 -11.3 -6.11644 | GTACCTAAAAAAAAA CCTACGC ATCT GCGTAGG TCGGTGCAAATAAAA bisC 874038 - 871777 - | putative biotin sulfoxide reductas2 galR 874348 - 875370 + | DNA-binding transcriptional regulator GalR lysA 876629 - 875367 - | diaminopimelate decarboxylase TERM 927 876373 - 876387 + g 70 -11.4 -2.64155 | opp_overlap 876370, overlap 876370 876369 CCCGGTTGATAACCC GCGTGC AAG GCACGC TCGATTTCACCCAAA lysR 876844 - 877785 + | DNA-binding transcriptional regulator LysR YPO0798 878942 - 877782 - | putative sugar transport protein YPO0799 880219 - 879311 - | LysR-family transcriptional regulatory protein YPO0800 880326 - 881213 + | hypothetical protein YPO0801 881326 - 881961 + | hypothetical protein cheD 883590 - 881947 - | putative methyl-accepting chemotaxis protein TERM 928 881979 - 882009 + g 91 -9.1 -4.84359 | overlap 881981 CAATAGCAGCAATCG TGCTCTCCTTTGC TAATC GTAGAGGAGAGTA TTTTTCTACAGGTAA TERM 929 881981 - 882007 + g 80 -9.5 -4.04397 | overlap 881979 ATAGCAGCAATCGTG CTCTCCTTTGC TAATC GTAGAGGAGAG TATTTTTCTACAGGT YPO0803 884194 - 883793 - | hypothetical protein YPO0804 884907 - 884191 - | putative regulatory membrane protein TERM 930 884351 - 884367 + g 71 -6.7 -4.15703 | opp_overlap 884349 884351 TGCTGCTGATAAACA GATAAAA ACG TTTTATC TTGTTCTTTATCCAA YPO0805 885191 - 885496 + | putative lipoprotein YPO0806 886390 - 885548 - | prepilin peptidase YPO0807 886877 - 886416 - | hypothetical protein YPO0808 888043 - 886874 - | general secretion pathway protein L YPO0809 889004 - 888048 - | general secretion pathway protein K YPO0810 889609 - 889013 - | general secretion pathway protein J YPO0811 889946 - 889602 - | general secretion pathway protein I YPO0812 890526 - 889984 - | general secretion pathway protein H YPO0813 890968 - 890531 - | general secretion pathway protein G TERM 931 890765 - 890748 - G 77 -9.9 -3.76224 | GGTTTAGTTACTAAA GCAGCAA TGCC TTGCTGC TCGGTCGGATAATCC YPO0815 893687 - 892176 - | general secretion pathway protein E TERM 932 893248 - 893258 + g 82 -4 -5.24129 | opp_overlap 893248 CCATCAATACGAAAT CTTA CAG TAAG TTTTTTATCGAAAGA YPO0816 895606 - 893684 - | general secretion pathway protein D TERM 933 895435 - 895446 + g 70 -3 -4.79657 | overlap 895441 CTTGGACCGTAGGAT CTAT GATA ATAG TTTTATTAATATTCT TERM 934 895579 - 895564 - G 89 -2.6 -5.8187 | gap 1, opp_overlap 895564, overlap 895565 GAGTGAATAAAAAAA TC-ATCC CAT GGATAGA TTTAATTCCTTTGCC YPO0817 896190 - 895687 - | general secretion pathway protein C TERM 935 896157 - 896167 + g 86 -5.4 -5.30189 | overlap 896159 GATTACAGTTGAGTG TCCT AAA AGGA TTTTTTAGTCTTATC YPO0818 896674 - 896258 - | hypothetical protein YPO0819 898172 - 897417 - | putative carbonic anhydrase TERM 936 898206 - 898228 + H 88 -9.8 -4.12188 | overlap 898207 TATAACCCTATTGTA TGCCGGGCAT TTA ATGCACGGCG TTTTAAAGGTAGTAC TERM 937 898207 - 898227 + H 79 -11.1 -3.06991 | overlap 898206 ATAACCCTATTGTAT GCCGGGCAT TTA ATGCACGGC GTTTTAAAGGTAGTA YPO0820 898548 - 898856 + | hypothetical protein YPO0821 899243 - 899437 + | hypothetical protein YPO0822 899459 - 900409 + | hypothetical protein YPO0823 900524 - 902710 + | hypothetical protein TERM 938 905015 - 905035 + G 75 -9.1 -3.87149 | opp_overlap 905023 905024 CACTCATCACTAAGT GGCAAATAT GGC ATGTTTGCC TTTAAATTTGATGCG YPO0824 902780 - 905893 + | hypothetical protein TERM 939 905969 - 905935 - T 79 -7.9 -4.33274 | gap 1, opp_overlap 905939 905940, overlap 905937 905940 GTTACATGATTAAAA CATGAC-TCAGGGCGC TTAG GCGCCCTGAGGTTATT GTGCCCAGAAAACCC TERM 940 905967 - 905937 - T 86 -10.5 -3.76811 | gap 1, opp_overlap 905939 905940, overlap 905935 905940 TACATGATTAAAACA TGAC-TCAGGGCGC TTAG GCGCCCTGAGGTTA TTGTGCCCAGAAAAC TERM 941 905939 - 905964 + T 100 -14.7 -3.78934 | opp_overlap 905937 905935 905940, overlap 905940 CATGATTAAAACATG ACTCAGGGCGC TTAG GCGCCCTGAGG TTATTGTGCCCAGAA TERM 942 905940 - 905963 + T 100 -18.2 -2.87146 | opp_overlap 905940 905937 905935, overlap 905939 ATGATTAAAACATGA CTCAGGGCGC TTAG GCGCCCTGAG GTTATTGTGCCCAGA TERM 943 905963 - 905940 - T 100 -18.2 -2.96723 | opp_overlap 905939 905940, overlap 905937 905935 ATGATTAAAACATGA CTCAGGGCGC TTAG GCGCCCTGAG GTTATTGTGCCCAGA TERM 944 906000 - 905982 - T 100 -16 -4.37092 | opp_overlap 905982 ATTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC TERM 945 905982 - 906000 + T 100 -16 -3.07307 | opp_overlap 905982 ATTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC YPO0825 907020 - 906238 - | transposase/IS protein TERM 946 906936 - 906950 + g 77 -11.4 -3.3506 | overlap 906949 CTGCCTGTTGTGACA GCGCAG GCG CTGCGC TTATAAGGCTTTCCA y1093 908039 - 907017 - | transposase for insertion sequence IS100 TERM 947 908061 - 908043 - R 100 -13.2 -4.01078 | AAAAGTGACCATAAA CTCTCCTG AAT CAGGAGAG CAGATTACCCCCTGG TERM 948 908608 - 908632 + r 88 -9.9 -4.1552 | opp_overlap 908611, overlap 908610 908611 ATAGGCGCATATGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTGACAAAGTG TERM 949 908610 - 908630 + r 100 -12.5 -3.6761 | opp_overlap 908611, overlap 908608 908611 AGGCGCATATGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTGACAAAG TERM 950 908611 - 908629 + r 100 -16 -2.80244 | opp_overlap 908611, overlap 908610 908608 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTGACAAA TERM 951 908629 - 908611 - R 100 -16 -4.8048 | opp_overlap 908611 908610 908608 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTGACAAA TERM 952 908706 - 908732 + r 72 -10.1 -2.88849 | gap 1, opp_overlap 908695, overlap 908701 908707 ACATCCATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCTCTGCC TERM 953 908707 - 908733 + r 84 -10.1 -3.82218 | gap 1, opp_overlap 908695, overlap 908701 908706 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCTCTGCCT TERM 954 908796 - 908811 + r 100 -11.8 -4.91084 | TTGTCAGCAGTCTGC GGGCGC TTAG GCGCCC TTTTATTATTAGGTC TERM 955 908960 - 908931 - R 100 -14.5 -3.44206 | gap 1 CAAGATCCACGATAA CCTCTTCCTGAGCA GAT TG-TCAGGAAGAGG AAGTCAGCCGTCGAT YPO0829 910535 - 908982 - | putative sulfatase YPO0831 911375 - 912151 + | DeoR-family regulatory protein TERM 956 912511 - 912485 - g 80 -10.2 -3.79747 | overlap 912486 CCATTTAGGACCAAA CCGTTGGCAG CACTTGC CTGCCAACGA AGCCATGGCGCATGC TERM 957 912510 - 912486 - g 73 -11.5 -2.87527 | overlap 912485 CATTTAGGACCAAAC CGTTGGCAG CACTTGC CTGCCAACG AAGCCATGGCGCATG agaZ 912201 - 913499 + | putative tagatose 6-phosphate kinase TERM 958 913655 - 913673 + G 71 -5.8 -4.41633 | overlap 913652 913656 CTGCATCAGGCATTA GCCGCGAG TAA CACGCGGA TTATTTTTACCGGTG YPO0833 913496 - 914662 + | putative phosphosugar isomerase manX 914680 - 915177 + | putative PTS transport protein YPO0835 915224 - 916012 + | putative PTS permease protein TERM 959 916247 - 916228 - g 76 -6.4 -4.63218 | opp_overlap 916227, overlap 916230 CCGCGTTGAAGAAAA TCCACGGT AACA ACCGTGCA GATTTGGCGAAATCG YPO0836 916002 - 916892 + | putative PTS permease protein YPO0837 916978 - 917418 + | putative PTS permease protein TERM 960 917799 - 917809 + G 74 -6.8 -4.36914 | ACCCGCACCGCAACC CTGC TCG GCAG TTTTCTGGAGGGGCC YPO0838 917421 - 918587 + | putative acetylglucosamine-6-phosphate deacetylase kduD2 918783 - 919538 + | 2-deoxy-D-gluconate 3-dehydrogenase TERM 961 920363 - 920378 + G 79 -6.8 -4.63932 | opp_overlap 920362 TCCTGCCCCAGAGAG CAGTGC AACA GCGCTG TTTTGTTACGGGCTG YPO0840 919554 - 920612 + | hypothetical protein TERM 962 920685 - 920704 + F 100 -12.2 -5.24531 | ATTTTGTTGCACTGG CGCACATC ACCT GATGTGCG TTTTTTATAGGCGAT YPO0841 920856 - 922082 + | putative regulatory protein TERM 963 922294 - 922280 - g 84 -4.2 -5.25803 | overlap 922283 922287 922291 AATCTGGATAAAAAA GCACTA AGC CAGCGC CCAGTTCCCGTACGC TERM 964 922648 - 922632 - g 71 -6.5 -4.15565 | CCGATGAGGTCAAAA GCCGCGA TTA TCACGAC AACATGATCTCCGTC TERM 965 923666 - 923648 - g 91 -11 -4.36903 | TGGATCAAAGATAAA CCCAAACC CGT GGCTTGGG GGCAAGATCGCTATC YPO0842 922103 - 923710 + | putative sulfatase YPO0843 923833 - 925320 + | hypothetical protein gatY 925429 - 926283 + | tagatose-bisphosphate aldolase TERM 966 926481 - 926452 - g 74 -9.9 -3.57792 | opp_overlap 926461 GCACCTATTTTGAAA CGCCGATCAGCGC AGAT GCGCTGTTAAGCG ATCGTCTGGATCACC YPO0845 926307 - 926885 + | ThiJ/PfpI-family thiamine biogenesis protein TERM 967 927011 - 927037 + T 95 -13.1 -3.05844 | opp_overlap 927017, overlap 927013 927017 ATAGCCAGTACCGTT GATGAACCGCA TGGTC TGCGGTTCGTC TCTTCGACTCCCCAA TERM 968 927013 - 927035 + T 74 -9.9 -3.08813 | opp_overlap 927017, overlap 927011 927017 AGCCAGTACCGTTGA TGAACCGCA TGGTC TGCGGTTCG TCTCTTCGACTCCCC YPO0846 928208 - 927126 - | LacI-family regulatory protein TERM 969 928152 - 928178 + g 75 -8.8 -3.8691 | overlap 928151 CACTCTTGATACCGT GCTAATCGAAAG ACC CGTTTGATTAGC TATTTCTTGTATTTT TERM 970 928465 - 928447 - H 82 -3.2 -5.56264 | opp_overlap 928447 TTGAAATATAAAAAA CTCAAT ATTATCA ATTGAG TATATTTTATATCGC TERM 971 929049 - 929031 - g 70 -2.3 -5.00616 | overlap 929034 929036 TGGTTCCCGAAAAAA GAACGGC CCATT GCCGCTG GATGGGCAGGGGTGG TERM 972 929046 - 929034 - g 76 -6.2 -4.61482 | overlap 929031 929036 TTCCCGAAAAAAGAA CGGC CCATT GCCG CTGGATGGGCAGGGG YPO0847 928602 - 929909 + | putative sugar transporter YPO0848 930057 - 932435 + | putative glucosidase TERM 973 932481 - 932456 - T 84 -9.7 -3.84017 | opp_overlap 932465, overlap 932458 TAATGTTAAATACAA GACGGACTTCC TGAT GGAAGCCCGTG AGGTTATTGACAAAG TERM 974 932479 - 932458 - T 100 -12.3 -3.49634 | opp_overlap 932465, overlap 932456 ATGTTAAATACAAGA CGGACTTCC TGAT GGAAGCCCG TGAGGTTATTGACAA TERM 975 932557 - 932583 + T 73 -10.1 -2.98487 | gap 1, overlap 932553 932552 932550 932558 ACATCCATGTAGGCT CGAGCCGCGCCA TCTT TGGCGCGGA-CG CTTTACTTCCTCTGC TERM 976 932558 - 932584 + T 86 -10.1 -3.98282 | gap 1, overlap 932553 932552 932550 932557 CATCCATGTAGGCTC GAG-CCGCGCCA TCTT TGGCGCGGACGC TTTACTTCCTCTGCC TERM 977 932648 - 932669 + T 100 -15.9 -4.96501 | overlap 932631 TTGTCAGCAGTCTGA CGGGCTTCC TGAT GGAAGCCCG TTTATTTTTGTACGG lacI 933837 - 932764 - | lac repressor lamB 934109 - 935368 + | maltoporin TERM 978 935547 - 935572 + T 100 -16.3 -4.73108 | TCGGTTATTCTTCTA TGCTCACTACC CTTA GGTAGTGAGCA TTTTAGTTTTATACC YPO0851 936052 - 935741 - | PTS transport protein (partial) TERM 979 936121 - 936142 + r 73 -10.1 -2.9186 | opp_overlap 936121 GTCGATGTAAAAAAA CGCCCACTC GGCT GAATGGGCG TGTATGGCATTCAGT TERM 980 936142 - 936121 - R 100 -12.3 -5.47218 | opp_overlap 936121 GTCGATGTAAAAAAA CGCCCACTC GGCT GAATGGGCG TGTATGGCATTCAGT bgaB 938224 - 936164 - | puative beta-galactosidase TERM 981 936345 - 936311 - G 71 -7.8 -3.99324 | overlap 936315 TTCTACCACGATAAA TTCACTCTCACCATCG GTA CGACGGTGAGCGGTAA CCCCATAAGGGAACT TERM 982 936341 - 936315 - G 77 -13 -2.7242 | overlap 936311 ACCACGATAAATTCA CTCTCACCATCG GTA CGACGGTGAGCG GTAACCCCATAAGGG TERM 983 936623 - 936654 + g 74 -7.4 -4.15044 | gap 1, overlap 936610 936609 TGCAAGTCCTTGGAC TTGATTGCTCTCGCC ATC GGCCAGA-CAGTCAA TTTCTTCGGACCAGA TERM 984 937016 - 937003 - G 76 -5.3 -4.8622 | TTTCCCAATCAAAAA TGATG GCAA CATCA GCGTCTACTTTACTT TERM 985 938253 - 938273 + r 83 -11.9 -2.60571 | opp_overlap 938249, overlap 938252 ATAATAAATACTTGG TGTTGCCCA TAA TGGGCAACG ATTAATTAAAAACTT YPO0853 939477 - 938275 - | putative galactosidase YPO0854 940333 - 939482 - | putative maltodextrin permease protein YPO0855 941652 - 940345 - | putative maltodextrin transport permease TERM 986 940751 - 940741 - G 74 -4.6 -4.87389 | CATGGCAAAAACAAA CGGG AAA CCCA GCCACGTCTGCATCA YPO0856 943074 - 941812 - | putative sugar-binding protein TERM 987 943373 - 943353 - H 84 -3.9 -5.50313 | opp_overlap 943354, overlap 943355 CATAAAATCAAAAAA CGCACCTCA GGG TGATGTGTG ATGGCCCCCTGACTG YPO0857 943410 - 944510 + | sugar transport ATP-binding protein TERM 988 944585 - 944563 - f 73 -9.1 -3.46509 | overlap 944557 GGTTAAGAATACCAA GCGGGTTTC CTGTT GAAGCCCGC TGAATATTAAGATAG YPO0858 945059 - 946567 + | sugar transport ATP-binding protein YPO0859 946633 - 947643 + | sugar transport system permease TERM 989 948116 - 948088 - g 80 -2.3 -5.52384 | overlap 948091 CTTTTATGAAAAAAA CAATGCTACAAAC TCT GCTTGCTGCAACG CTGATACTTTCCTTT TERM 990 948113 - 948091 - g 74 -4.8 -4.8487 | overlap 948088 TTATGAAAAAAACAA TGCTACAAAC TCT GCTTGCTGCA ACGCTGATACTTTCC YPO0860 948078 - 949079 + | sugar-binding periplasmic protein TERM 991 949100 - 949127 + F 100 -12.7 -3.57792 | opp_overlap 949089 ATGATCGCTATCGCC CCCGGCAGCGG CAAAAT CTGCTGTCGGG TTTGAGGGTAAATCC YPO0862 949858 - 950376 + | hypothetical protein YPO0863 950752 - 951609 + | hypothetical protein TERM 992 951616 - 951628 + F 74 -4.8 -4.82901 | opp_overlap 951611 AGCCAATAACCGTTT GGTG CTGCT CACC TTTTTATCAGAAGGG TERM 993 951806 - 951819 + F 77 -3.9 -5.21709 | overlap 951797 CCCAGTTCAACATTT TGATT TAAA AATCA TTTTTTGATATCCCC TERM 994 951931 - 951949 + F 75 -7.4 -4.27861 | opp_overlap 951921 951924, overlap 951932 TAAAAGCACGCGGGA TGCGTTGC GCA GTAACGCG TTTTAGATATATCTT TERM 995 952624 - 952600 - g 73 -9.4 -3.80733 | gap 1 CTCACGCCAGAACAA GTAGCG-CGTA TTAA TACGGCGCTAC TGGCTGCGGTAGACA YPO0864 952033 - 952713 + | hypothetical protein YPO0865 952713 - 953033 + | hypothetical protein YPO0866 953421 - 953116 - | hypothetical protein YPO0867 954417 - 953638 - | hypothetical protein YPO0868 954710 - 954498 - | hypothetical protein YPO0869 955738 - 955022 - | hypothetical protein TERM 996 955540 - 955551 + g 71 -5.8 -4.36914 | overlap 955536 GTGTCAGCCTAGAGC TGGG TAGC CCCA TTTTCTGAAACCAGG YPO0870 958083 - 955759 - | hypothetical protein TERM 997 956387 - 956397 + g 76 -3.2 -5.11836 | TGCTGTTGTAAAAGT GCTT TTT GAGC TTTTGTTTTGAGTAT YPO0871 958612 - 958328 - | putative colicin immunity protein YPO0872 958916 - 958659 - | hypothetical protein TERM 998 959270 - 959287 + r 70 -2.7 -4.93877 | gap 1, overlap 959272 GCTTGTAGGCTTCTT TG-GCTTC GTT GAGGCTCA TTTTATTTGCTCCAC YPO0873 960964 - 959426 - | hypothetical protein YPO0874 962610 - 961468 - | hypothetical protein YPO0875 962879 - 963244 + | hypothetical protein YPO0876 963257 - 963493 + | hypothetical protein YPO0877 963499 - 963831 + | hypothetical protein TERM 999 963912 - 963925 + F 75 -3.1 -5.18866 | opp_overlap 963912, overlap 963916 TGACCTAAAACGACA GGAAT AAAG GTTCC TTTTATTTATTTGCC TERM 1000 964148 - 964097 - g 74 -6.6 -4.40993 | gap 1, opp_overlap 964132 TATAAATTATTAAAA CAAAAGCGCT-TCCCGCCACC GATAAAAATAG GGGGGCGGGCTATCGCTTTTG TTGAAAGTGAGGTGA YPO0878 964013 - 964213 + | putative regulatory protein YPO0879 964698 - 964372 - | hypothetical protein TERM 1001 964426 - 964439 + g 79 -5.2 -5.00616 | GCCTTTCTCTTTCCA CGGC ATATAA GCCG TTTTTTGCACCACAA TERM 1002 964790 - 964752 - H 74 -6.6 -4.2828 | opp_overlap 964756, overlap 964756 964776 GCGGATGTATCAAAA GGAACGCCCCGACATCAC TCA ATACTGCCGGGGCGTTTA TCCACCACGGAGCAA TERM 1003 964786 - 964756 - H 93 -11.8 -3.72073 | opp_overlap 964756, overlap 964752 964776 ATGTATCAAAAGGAA CGCCCCGACATCAC TCA ATACTGCCGGGGCG TTTATCCACCACGGA TERM 1004 965761 - 965748 - g 72 -3.7 -4.82901 | overlap 965749 TTGTCCGCAGAAAAA GCCGC CAAC GCGGT CAATGGTTGGGTGAC TERM 1005 967190 - 967179 - g 80 -2.2 -5.5208 | GCAGAATACAAAAAA GCCA GAAC TGAC AAAGGGTTCCGCTAC YPO0880 964998 - 967289 + | putative primase TERM 1006 967395 - 967361 - T 100 -10.2 -5.26155 | opp_overlap 967361 ATACAAAGATAAAAA CTGACTGAATAGTT TACTAAT AACTGTTCAGTCAG TATTCAGAGGTGTTC TERM 1007 967361 - 967395 + T 93 -12.4 -3.04248 | opp_overlap 967361 ATACAAAGATAAAAA CTGACTGAATAGTT TACTAAT AACTGTTCAGTCAG TATTCAGAGGTGTTC TERM 1008 967471 - 967440 - T 71 -4.4 -4.7497 | GGCAGGTATTAAAAA CTGAACACCTGAAC AGTT GCTGAAGAGTTCAG CGGGGAGTATTCAGA YPO0881 968087 - 967689 - | hypothetical protein YPO0882 968383 - 968087 - | hypothetical protein TERM 1009 968422 - 968436 + r 70 -7.2 -3.87075 | opp_overlap 968420 968422, overlap 968425 TCCACTTAATAAATA TAACCT AGT AGGTTA TTTATAGCAAGTCAT YPO0883 968909 - 968547 - | putative DNA binding protein YPO0884 969232 - 968972 - | hypothetical protein TERM 1010 969495 - 969522 + r 80 -10.5 -3.54424 | GGTCAGATATAGTGC CCCCGCAGCGG CAAAAT CCGTTGCTGGG TTTAGCAGCCTGAGA TERM 1011 970032 - 970047 + r 75 -9 -3.5936 | opp_overlap 970032 CTCTAAATACAAAAA GGCATC GTGA GATGCC TTTAAAAAGTTTGGA TERM 1012 970047 - 970032 - R 100 -9 -5.19879 | opp_overlap 970032 CTCTAAATACAAAAA GGCATC GTGA GATGCC TTTAAAAAGTTTGGA int 971311 - 970097 - | integrase TERM 1013 971715 - 971700 - R 100 -11.8 -4.7497 | CTGACTCAGTAAAAA GGGCGC CGTA GCGCCC TGAGGAATTTATCGT lysS 973261 - 971744 - | lysyl-tRNA synthetase prfB 974369 - 973271 - | peptide chain release factor 2 TERM 1014 974233 - 974255 + g 93 -13.4 -4.0802 | CGGGTTCATTCCAGA CGTCGGGCTG TTC CAGCTCGGCG TTTACTTCTTCCAGT recJ 976281 - 974548 - | ssDNA exonuclease RecJ TERM 1015 976026 - 976001 - G 79 -11.1 -3.56643 | overlap 976002 CCCATACTGCGCAAA GCCAGCACCGC CAAC GCGGTACTGGT CGCGCCGTCAGCATC TERM 1016 976025 - 976002 - G 82 -14.6 -2.73771 | overlap 976001 CCATACTGCGCAAAG CCAGCACCGC CAAC GCGGTACTGG TCGCGCCGTCAGCAT dsbC 977004 - 976288 - | thiol:disulfide interchange protein DsbC xerD 977934 - 977035 - | site-specific tyrosine recombinase XerD fldB 978041 - 978559 + | flavodoxin FldB TERM 1017 978590 - 978628 + T 77 -11.2 -2.8655 | opp_overlap 978600, overlap 978595 978596 CCTGTTACATCAGAG CTCAATTTAACGGGCA CCCGATA TGCCCGTTAAGTTTAG TCTAGTCTAGCTGCG TERM 1018 978595 - 978623 + T 84 -9.7 -3.8766 | opp_overlap 978600, overlap 978590 978596 TACATCAGAGCTCAA TTTAACGGGCA CCCGATA TGCCCGTTAAG TTTAGTCTAGTCTAG TERM 1019 978596 - 978622 + T 79 -11 -2.92114 | opp_overlap 978600, overlap 978595 978590 ACATCAGAGCTCAAT TTAACGGGCA CCCGATA TGCCCGTTAA GTTTAGTCTAGTCTA creD 980127 - 978649 - | hypothetical protein TERM 1020 979660 - 979641 - G 70 -9.2 -3.55444 | CGCTGAGTGGCGAAA TGCGCTGG ATAC CCCGCGCA TCACTCAGTGCCAGC creC 981645 - 980227 - | sensory histidine kinase CreC creB 982371 - 981670 - | DNA-binding response regulator CreB YPO0896a 982793 - 982368 - | hypothetical protein YPO0897 983040 - 982774 - | hypothetical protein TERM 1021 983159 - 983140 - H 78 -10 -3.54382 | overlap 983123 CGTTAATATAACTAA CGGGAATG TTAC CACTCCCG GGATAGGGGGTTAAG TERM 1022 983183 - 983197 + H 80 -2.8 -5.52384 | opp_overlap 983183 983185, overlap 983185 GGTTAAGGTACTAAA TACACT GCA AGTGCA TTTTTTTAATCGCCC TERM 1023 983750 - 983739 - g 74 -7.2 -4.14739 | GTAGCCAGGCCAAAA CCGC GCTG GCGG AAATCTTTACTGAAT YPO0898 983357 - 984349 + | putative global regulator TERM 1024 984364 - 984354 - T 73 -5.4 -4.66814 | AAGATAAATAATAAA GAGT TCT ACTC TACAGAGACCGGTTA TERM 1025 984365 - 984392 + T 100 -18.6 -5.23292 | opp_overlap 984371 984373 TAAAGAGTTCTACTC TACAGAGACCGG TTAA CCGGTCTCTGTA TTTTGTTTTATATCA TERM 1026 984386 - 984371 - T 75 -10.4 -2.89564 | opp_overlap 984365, overlap 984373 GTTCTACTCTACAGA GACCGG TTAA CCGGTC TCTGTATTTTGTTTT YPO0899 984919 - 984422 - | hypothetical protein YPO0900 985878 - 985177 - | putative hemolysin III YPO0901 987225 - 986080 - | hypothetical protein YPO0902 989263 - 987287 - | putative surface protein (partial) TERM 1027 989582 - 989569 - R 70 -5.3 -4.47183 | overlap 989575 TATTATCTAAACAAA CCATA ACAT TATGG AATGTCGGCTAGTTG YPO0904 990910 - 990473 - | hypothetical protein TERM 1028 991171 - 991145 - R 72 -7.2 -3.9749 | gap 1, opp_overlap 991154, overlap 991146 991162 AGGCAGAAGAGTAAA GCGTCCGCGCC AGAGAA GGCGCGG-CTC GAGCCTACATGGATG TERM 1029 991246 - 991271 + r 82 -8.2 -4.26903 | opp_overlap 991245 991246, overlap 991250 CACTTTGTCAATAAC CTCAGGGCCG CTTTCA CGGCCCTTGG TTTTGCTCAGATGAG TERM 1030 991250 - 991267 + r 80 -9.8 -3.71672 | opp_overlap 991245 991246, overlap 991246 TTGTCAATAACCTCA GGGCCG CTTTCA CGGCCC TTGGTTTTGCTCAGA gcvP 994167 - 991288 - | glycine dehydrogenase TERM 1031 994348 - 994373 + r 71 -9 -3.23979 | overlap 994342 TTTAACCTACTCGGC GTCAGGGCCA ATAAAA TGGCCCTCAC TTGAGTTACTCTTCA gcsH 994765 - 994379 - | glycine cleavage system protein H gcvT 995931 - 994834 - | glycine cleavage system aminomethyltransferase T TERM 1032 996088 - 996078 - R 75 -8.2 -3.76167 | opp_overlap 996077, overlap 996076 CCATAAGCTAAAATA GGCG AGG CGCC CTCTTCAGGCGACAA visC 997872 - 996652 - | hypothetical protein ubiH 999223 - 998045 - | 2-octaprenyl-6-methoxyphenyl hydroxylase pepP 1000605 - 999292 - | proline aminopeptidase P II TERM 1033 999761 - 999747 - G 75 -9.2 -3.91032 | opp_overlap 999743 999748, overlap 999748 GAACGATGTCATAAA CCGCCC GCT GAGCGG GGGTAAATTTGCCAT YPO0911 1001271 - 1000693 - | hypothetical protein TERM 1034 1001549 - 1001569 + H 73 -8.3 -3.62096 | ACGCCCGCTTTGCAG CCACAAGCA ATT TGCTTCTGG TTTGCAGTGCTGGCG YPO0912 1001608 - 1001937 + | Z-ring-associated protein TERM 1035 1002453 - 1002465 + G 79 -9.1 -4.17516 | AATCCAGCAAGCTCA CACGG TAG CCGTG TTTCTCTCCTTTGAC YPO0913 1002301 - 1002897 + | putative 5-formyltetrahydrofolate cyclo-ligase-family protein TERM 1036 1002950 - 1002924 - T 100 -22.4 -6.02914 | TCGAGATAAAAAAAA CACCGGGGATCC TAT GGATCCCCGGTG TCAGACTGCTGACAA TERM 1037 1003039 - 1003013 - T 72 -7.2 -3.9749 | gap 1, opp_overlap 1003022, overlap 1003014 AGGCAGAAGAGTAAA GCGTCCGCGCC AGGGAG GGCGCGG-CTC GAGCCTACATGGATG TERM 1038 1003118 - 1003144 + T 88 -10.8 -3.8901 | opp_overlap 1003114 1003113 TTGTCAATAACCTCA CACCTGAGATCC TAT GGATCCCAGGCG TTTAATCATTTCAGG serA 1004403 - 1003162 - | D-3-phosphoglycerate dehydrogenase TERM 1039 1003208 - 1003218 + g 79 -6.8 -4.63542 | GGAATGGCCTTCATC GCCT GCA AGGC TTTTTCCGCATTATC TERM 1040 1004085 - 1004051 - G 73 -12.2 -2.57974 | opp_overlap 1004058, overlap 1004047 ATCAGCAGCAACTCA CCCAATACCATTTCGG CTA CCGAACGGGTATTGGA GAAAGGCGCATTGAA TERM 1041 1004706 - 1004670 - R 71 -2.2 -5.22039 | overlap 1004661 TTCAAAGGCAAAAAA TTATCAGGGTGAAGCC AAATA AACGACACCCTGAAAA ATTTTAGCCAATCAC rpiA 1005366 - 1004710 - | ribose-5-phosphate isomerase A iciA 1005708 - 1006616 + | chromosome replication initiation inhibitor protein TERM 1042 1006611 - 1006643 + T 71 -4.9 -4.64676 | GACTCGTTTATTGGG CAGTAGCTGTTTA TGTTTAC TGAGCAGCAACTG TTTTATTGGCAGTAG yggE 1007406 - 1006627 - | hypothetical protein TERM 1043 1007191 - 1007206 + g 79 -6.8 -4.64766 | AAAGTATTGCGCGAC GCGGGT ATCG ACCTGC TTTTTGGCATCTGCA yggA 1008213 - 1007596 - | arginine exporter protein TERM 1044 1007765 - 1007745 - G 76 -7.5 -4.30001 | overlap 1007742 CAAAAAACCAAACAA TAGAGGCCG TAA CCGCCCCTA AAGCAAACCAAGGGC TERM 1045 1008440 - 1008425 - R 85 -7.5 -4.7497 | opp_overlap 1008425 CCGAGCGAGTAAAAA CGGGC ACTGAG GCCCG TTTAATCTATTTACC TERM 1046 1008425 - 1008440 + r 72 -7.5 -3.97308 | opp_overlap 1008425 CCGAGCGAGTAAAAA CGGGC ACTGAG GCCCG TTTAATCTATTTACC YPO0919 1009345 - 1008476 - | hypothetical protein TERM 1047 1009380 - 1009366 - R 100 -7.8 -5.26316 | CCATCCTACAAAAAA GCTCCC TAC AGGAGC AATTACGCCAAAAAA TERM 1048 1009417 - 1009398 - R 93 -4.2 -5.78622 | overlap 1009409 TTACGCCAAAAAAAA TCACCATC TAAC GCTGGCGA CTCTAGCCAACGGCC TERM 1049 1009570 - 1009557 - R 100 -9.5 -5.30155 | opp_overlap 1009557 TCAGCAACGAAAAAA GGCCC CGTA GGGCC TTTCAGACTGCTGAC TERM 1050 1009557 - 1009570 + r 78 -9.5 -3.58343 | opp_overlap 1009557 TCAGCAACGAAAAAA GGCCC CGTA GGGCC TTTCAGACTGCTGAC TERM 1051 1009661 - 1009635 - R 84 -10.1 -3.82218 | gap 1, opp_overlap 1009644, overlap 1009636 1009651 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 1052 1009662 - 1009636 - R 72 -10.1 -2.88849 | gap 1, opp_overlap 1009644, overlap 1009635 1009651 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT TERM 1053 1009762 - 1009735 - R 100 -14.2 -3.62046 | opp_overlap 1009742, overlap 1009742 GCACTTTGTCAATAA CCTCAAAGGCCC CGTA GGGCCTTTTAGG TCAGTCCGAACAGAC TERM 1054 1009742 - 1009755 + r 85 -9.5 -4.19817 | opp_overlap 1009742 1009735 GTCAATAACCTCAAA GGCCC CGTA GGGCC TTTTAGGTCAGTCCG TERM 1055 1009755 - 1009742 - R 78 -9.5 -3.72051 | opp_overlap 1009742, overlap 1009735 GTCAATAACCTCAAA GGCCC CGTA GGGCC TTTTAGGTCAGTCCG fbaA 1010862 - 1009783 - | fructose-bisphosphate aldolase pgk 1012145 - 1010982 - | phosphoglycerate kinase TERM 1056 1011223 - 1011238 + g 76 -7.6 -4.31329 | opp_overlap 1011219 AACACACCAACCGGA CCATTC CACA GAATGG TTTTGGCATTTTTCA TERM 1057 1011599 - 1011617 + g 100 -16 -3.56568 | opp_overlap 1011586 1011593 1011591 TAGCAACCATTGGAC GCGCTGGG TTA CCCAGCGC TTTACCCAATGCTTC epd 1013264 - 1012248 - | erythrose 4-phosphate dehydrogenase TERM 1058 1013347 - 1013368 + r 73 -5.8 -4.42653 | opp_overlap 1013348, overlap 1013348 1013349 ATCGTATTATCACAA TTCGGCCA TAATAC TGGCCGGG TTTTCTCGGTGGGAT TERM 1059 1013462 - 1013452 - R 70 -5.4 -4.49344 | overlap 1013458 1013459 AAAGTCATGATAAAA GGAA TAT TTCC CTGAAAAAGGGCACA YPO0923 1014361 - 1013579 - | transposase/IS protein TERM 1060 1014277 - 1014291 + g 77 -11.4 -3.3506 | overlap 1014290 CTGCCTGTTGTGACA GCGCAG GCG CTGCGC TTATAAGGCTTTCCA y1093 1015380 - 1014358 - | transposase for insertion sequence IS100 TERM 1061 1015402 - 1015384 - R 100 -13.2 -4.01078 | AAAAGTGACCATAAA CTCTCCTG AAT CAGGAGAG CAGATTACCCCCTGG TERM 1062 1015465 - 1015483 + r 100 -10.2 -4.8048 | overlap 1015467 TTGCACCGTTCGTTA CATCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 1063 1015467 - 1015481 + r 80 -11.4 -2.68202 | overlap 1015465 GCACCGTTCGTTACA TCCGGC ATA GCCGGA GGTTTTTCATATGCG tnp 1016022 - 1015564 - | transposase for the IS1541 insertion element TERM 1064 1016135 - 1016153 + r 100 -16 -4.36914 | opp_overlap 1016135 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 1065 1016153 - 1016135 - R 100 -16 -3.07307 | opp_overlap 1016135 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 1066 1016174 - 1016189 + r 91 -10.4 -4.09864 | opp_overlap 1016174 TGGGCACAAAAAAAA GACCGC AAAA GCGGTC TTTTAACAGGTGCAT TERM 1067 1016189 - 1016174 - R 100 -10.4 -5.93809 | opp_overlap 1016174 TGGGCACAAAAAAAA GACCGC AAAA GCGGTC TTTTAACAGGTGCAT TERM 1068 1016252 - 1016279 + r 75 -5.6 -4.58663 | TGCAGTATTGATAAC GTCGTTGCCTGT TTTA ACAGTTAATGAC TTTTTAACGGCTAAT tktA 1018324 - 1016330 - | transketolase TERM 1069 1018498 - 1018488 - H 71 -4.6 -4.63218 | TTGGGGTGAACAAAA GCAG CCA CCGC ACAACGACAAACCAT TERM 1070 1019435 - 1019421 - g 86 -7 -5.0133 | GATTTGCTGAAAAAA CGGGGC ATT GACCCG AACGGTCTGGTAACC YPO0927 1018815 - 1019567 + | putative lipoprotein TERM 1071 1019620 - 1019592 - T 72 -9.6 -3.14564 | gap 1, overlap 1019596 CCAGTCTCTTATCAA TGCAGACGCCCCA CTGT TGGGGCGTCAG-A CTGCTGACAAACCCC TERM 1072 1019617 - 1019596 - T 100 -15.9 -2.56596 | overlap 1019592 TCTCTTATCAATGCA GACGCCCCA CTGT TGGGGCGTC AGACTGCTGACAAAC TERM 1073 1019704 - 1019678 - T 84 -10.1 -3.82218 | gap 1, opp_overlap 1019687, overlap 1019679 1019694 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 1074 1019705 - 1019679 - T 72 -10.1 -2.88849 | gap 1, opp_overlap 1019687, overlap 1019678 1019694 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT TERM 1075 1019805 - 1019778 - T 80 -9.8 -3.62046 | opp_overlap 1019779 1019799, overlap 1019779 GCACTTTGTCAATAA CCTCACTCCCCA CTGT TGGGGCGTGAGT TCTGTAGCTGACGTT TERM 1076 1019779 - 1019804 + T 100 -13.3 -3.52102 | opp_overlap 1019778 1019779, overlap 1019799 CACTTTGTCAATAAC CTCACTCCCCA CTGT TGGGGCGTGAG TTCTGTAGCTGACGT TERM 1077 1019804 - 1019779 - T 93 -13.3 -2.77013 | opp_overlap 1019779 1019799, overlap 1019778 CACTTTGTCAATAAC CTCACTCCCCA CTGT TGGGGCGTGAG TTCTGTAGCTGACGT YPO0928 1020177 - 1019857 - | putative Rieske protein TERM 1078 1020306 - 1020287 - R 100 -8.6 -5.40072 | opp_overlap 1020287 TCGCGCCGAAAAAAA GGACAAAC CTGA GTTTGCCC TTTAATCGATACTGA speA 1022316 - 1020337 - | arginine decarboxylase metK 1023523 - 1024677 + | S-adenosylmethionine synthetase TERM 1079 1024723 - 1024753 + F 100 -13.3 -4.62441 | opp_overlap 1024723 TAAAACGATGAAGAA CCACCCTGTAAGC AACAC GCTGGCAGGGTGG TTTATTTGTATGCAC TERM 1080 1024753 - 1024723 - f 100 -11.8 -3.81516 | opp_overlap 1024723 TAAAACGATGAAGAA CCACCCTGTAAGCA ACA CGCTGGCAGGGTGG TTTATTTGTATGCAC YPO0932 1024870 - 1025382 + | hypothetical protein TERM 1081 1025717 - 1025698 - g 84 -4.2 -5.31456 | gap 1, opp_overlap 1025699, overlap 1025699 1025702 TCAACCCAGAAAAAA TGCAGCGCG AGC CGCGCGG-A TTGAATGGGAACATG TERM 1082 1025714 - 1025702 - g 70 -10.5 -2.96157 | opp_overlap 1025699, overlap 1025699 1025698 CCCAGAAAAAATGCA GCGCG AGC CGCGC GGATTGAATGGGAAC endA 1025480 - 1026187 + | endonuclease I TERM 1083 1026636 - 1026618 - g 74 -3.8 -4.9725 | opp_overlap 1026608 ACGGGCAGATAAAAA GAATCTGA TTG TCCGACTC GCTGAAGGGCAATGG YPO0934 1026439 - 1027170 + | hypothetical protein gshB 1027196 - 1028155 + | glutathione synthetase YPO0936 1028271 - 1028834 + | hypothetical protein YPO0937 1028834 - 1029256 + | Holliday junction resolvase-like protein TERM 1084 1029394 - 1029408 + F 95 -5.7 -5.59564 | GTTTAAAATATTGCA CACCT CTTGC AGGTG TTTTTTTACATTTAT YPO0938 1029436 - 1030320 + | putative carbon-nitrogen hydrolase YPO0939 1030324 - 1031439 + | agmatine deiminase TERM 1085 1031464 - 1031491 + T 100 -15 -4.20783 | AAATAAGCCGCCTGC TTGACCCGGATC ATCC GATCCGGGTTAA TTTATTGCATCACCT YPO0940 1032624 - 1031548 - | hypothetical protein TERM 1086 1033129 - 1033093 - g 78 -13.1 -2.87527 | opp_overlap 1033096, overlap 1033097 CAGTGATGAGCAAAG CAAAGCGGGGATTTC CTTGAGT GAACTCCCCGCCTTG GCTGACAGCATTAGT TERM 1087 1033125 - 1033097 - g 84 -10.3 -4.11623 | opp_overlap 1033096, overlap 1033093 GATGAGCAAAGCAAA GCGGGGATTTC CTTGAGT GAACTCCCCGC CTTGGCTGACAGCAT YPO0941 1032692 - 1033390 + | hypothetical protein proC 1033523 - 1034344 + | pyrroline-5-carboxylate reductase TERM 1088 1034828 - 1034838 + G 70 -3.2 -4.77036 | TCGATAGCGCATCAT TGCT GTT GGCA TTTTTACTGATGACC yggT 1034632 - 1035186 + | hypothetical protein YPO0944 1035183 - 1035473 + | hypothetical protein YPO0945 1035573 - 1036166 + | putative deoxyribonucleotide triphosphate pyrophosphatase TERM 1089 1036468 - 1036485 + G 70 -9.1 -3.56643 | opp_overlap 1036461, overlap 1036477 GAAGCCAACCCCGGA GCGGTCG AAGC CGATCGC TTTAGCGGCTATCAG YPO0946 1036159 - 1037289 + | coproporphyrinogen III oxidase TERM 1090 1037425 - 1037452 + T 74 -9.8 -3.14961 | overlap 1037423 1037421 CAGTATGACTGGTGT CTCTGAGGGCAG AAAC CTGCCCTCAGCC TCTCTTCCTGCTAAT YPO0947 1046811 - 1037479 - | putative virulence determinant TERM 1091 1043392 - 1043411 + g 70 -10 -3.28447 | opp_overlap 1043392 1043391, overlap 1043391 1043393 TTCATTATGACTAAT TTCACGCC ACTC GGCGTGAG TATTATCGTCAATGA TERM 1092 1043393 - 1043410 + g 70 -11.3 -2.56747 | opp_overlap 1043392 1043391, overlap 1043392 1043391 TCATTATGACTAATT TCACGCC ACTC GGCGTGA GTATTATCGTCAATG TERM 1093 1044442 - 1044462 + g 76 -12.7 -2.57243 | overlap 1044441 1044439 1044444 AGCAATAATCTCTCC GACTCTCTT AGA AAGAGAGTC ATCTTGTAATAATAC TERM 1094 1044494 - 1044505 + g 70 -3 -4.86731 | ATAAATTGTAGGTGG TGAT TTTT ATCA TTTTGTTTAAAGGAA TERM 1095 1047280 - 1047304 + r 78 -5.6 -4.75472 | opp_overlap 1047278 1047277, overlap 1047280 1047280 GGCGATTCTAAATTT GGAGGGGG AATATCCCC CCCCCCCC TTTTATTACTCTAAG YPO0949 1049081 - 1048155 - | glutaminase TERM 1096 1049160 - 1049143 - R 100 -9.8 -4.91852 | opp_overlap 1049142 1049140 1049143 GCCAGTAAAAACAAA GGCGCC GGTTAG GGCGCC CTGTTTAATGATCAG TERM 1097 1049143 - 1049160 + r 71 -9.8 -2.68493 | opp_overlap 1049143, overlap 1049142 1049140 GCCAGTAAAAACAAA GGCGCC GGTTAG GGCGCC CTGTTTAATGATCAG YPO0950 1049518 - 1049192 - | hypothetical protein trmB 1050237 - 1049518 - | tRNA (guanine-N(7))-methyltransferase mutY 1050575 - 1051690 + | adenine DNA glycosylase YPO0953 1051868 - 1052140 + | hypothetical protein TERM 1098 1052144 - 1052168 + F 83 -9.3 -4.015 | gap 1, opp_overlap 1052141 1052137 1052146, overlap 1052146 CCGAGTAAGTAACCA CA-CGGGGCC AATTAA GGCCCCGCTG TTATTTCCTAAATAG TERM 1099 1052146 - 1052165 + F 83 -12.1 -2.75069 | opp_overlap 1052141 1052137 1052146, overlap 1052144 GAGTAAGTAACCACA CGGGGCC AATTAA GGCCCCG CTGTTATTTCCTAAA TERM 1100 1052165 - 1052146 - f 86 -12.1 -2.97613 | opp_overlap 1052146 1052144, overlap 1052141 1052137 GAGTAAGTAACCACA CGGGGCC AATTAA GGCCCCG CTGTTATTTCCTAAA TERM 1101 1052831 - 1052807 - g 100 -9.4 -5.18371 | gap 1, opp_overlap 1052807 TGCTACAAAACAAAA TGCAAACACGG ACTT CCG-GTTTGCA TGTGATCTCGTTCGT mltC 1052323 - 1053399 + | murein transglycosylase C YPO0955 1053828 - 1054799 + | hypothetical protein TERM 1102 1055646 - 1055611 - g 79 -11.1 -3.57792 | opp_overlap 1055613 CCACGCACTGGCAAA CCCGTCGACACGCCG CGTGAT CGCCGTTTCGACGAG AGCTATAACGCCACC YPO0956 1054837 - 1056936 + | putative hydroxamate-type ferrisiderophore receptor YPO0957 1058038 - 1057019 - | putative sugar transport system permease protein TERM 1103 1057920 - 1057909 - G 84 -4.4 -5.35721 | ACATAACAATAAAAA CAAC GGTC GTTG AGTTGTCTAGCAGGA mglA 1059534 - 1058035 - | putative sugar transport ATP-binding protein YPO0959 1060539 - 1059580 - | putative sugar ABC transporter periplasmic binding protein TERM 1104 1061070 - 1061041 - R 83 -11.5 -3.05521 | ATGAGATGTTTAATA CCGAGGCCATC AATTAAAA AATGGCCTCGG CTGATGGAGCGGAGA speC 1063257 - 1061095 - | ornithine decarboxylase TERM 1105 1062833 - 1062823 - G 74 -2.4 -5.1925 | GTAGAATTCAAAAAA CTGG CGT CCTG CAGGATGCTTGCGAA TERM 1106 1062882 - 1062853 - G 76 -4.3 -5.00884 | gap 1 ATGCTTGCGAAAAAA TTCGCCC-CCCTGA TGG CCAGGGCAAGCAAA GGTCGAGTTATTCAT TERM 1107 1063968 - 1063952 - R 76 -10.9 -2.62616 | opp_overlap 1063951 1063950 1063947 TCAGTCGGTAGAGCA GGGGATT GAA AATCCCC GTGTCCTTGGTTCGA TERM 1108 1064123 - 1064149 + r 81 -7.2 -4.71776 | opp_overlap 1064123 TACGGGACGAAGAAA CCGGAGGATGTC GAT GACAAACTTCGG TTTTCTTGCGTCTTA YPO0961 1064562 - 1064254 - | integrase (partial) YPO0962 1065221 - 1064586 - | hypothetical protein TERM 1109 1065586 - 1065576 - R 76 -2.6 -5.36441 | opp_overlap 1065576 TCCTTATACAAAAAA TTAT TAT ATAA ATAGTTTGTGTAATG TERM 1110 1065576 - 1065602 + r 71 -3.2 -5.01042 | opp_overlap 1065576 TCCTTATACAAAAAA TTATTATATAAA TAG TTTGTGTAATGA TTTTTCCTTTAAATT insB 1066185 - 1065829 - | insertion sequence protein insA 1066526 - 1066251 - | insertion sequence protein YPO0965 1067371 - 1066622 - | hypothetical protein TERM 1111 1067247 - 1067258 + g 74 -4.4 -4.84033 | TGGTTTTTTTTTACA TGCA AAAT TGCA TTTTCATTTTTGTCT TERM 1112 1067364 - 1067345 - G 73 -3 -5.00616 | GTGGGGTGTAAAAAA TAAAATAT AAAA ATATTTCA ATGTCAATTTTTTAA YPO0966 1069673 - 1067376 - | putative kinase TERM 1113 1067502 - 1067515 + g 72 -3.9 -4.75288 | ATCGGCACTTTCTGC TTGAT CTTT ATCAA TTTCTTTTACTGTAC TERM 1114 1068896 - 1068906 + g 74 -6.8 -4.31329 | TGTATTCGTAATCTG CACC ATC GGTG TTTTCCAGTTTTTCA YPO0967 1070324 - 1069689 - | hypothetical protein TERM 1115 1070689 - 1070679 - R 76 -2.6 -5.36441 | opp_overlap 1070679 TCCTTATACAAAAAA TTAT TAT ATAA ATAGTTTGTGTAATG TERM 1116 1070679 - 1070705 + r 71 -3.2 -5.01042 | opp_overlap 1070679 TCCTTATACAAAAAA TTATTATATAAA TAG TTTGTGTAATGA TTTTTCCTTTAAATT YPO0967a 1071191 - 1070859 - | insertion sequence protein (partial) insA 1071520 - 1071245 - | insertion sequence protein YPO0968a 1072287 - 1071907 - | hypothetical protein TERM 1117 1072307 - 1072327 + r 73 -9.7 -3.03348 | opp_overlap 1072309, overlap 1072306 1072310 CAGGAATATTTATAG CAGCCTCTC CCA GAGGGGTTG ATTTATGCTCTTCCC TERM 1118 1072310 - 1072324 + r 70 -7.8 -3.64902 | opp_overlap 1072309, overlap 1072307 1072306 GAATATTTATAGCAG CCTCTC CCA GAGGGG TTGATTTATGCTCTT YPO0969 1074620 - 1072398 - | hypothetical protein TERM 1119 1074560 - 1074580 + g 95 -15.5 -3.18511 | opp_overlap 1074564 GCATCATCGCGTCAA CCCAGTCAG CAT CTGACTGGG TTGCATCTCTATCTC YPO0970 1076983 - 1074635 - | hypothetical protein TERM 1120 1075811 - 1075830 + g 70 -2.8 -4.8143 | gap 1, overlap 1075811 1075812 1075827 GGTGCTGGTGACCCG T-GCGGGCA AGG TGCCGGCCA TTTTTGGCTTGTTGA clpB3 1079628 - 1076980 - | Clp ATPase TERM 1121 1079962 - 1079943 - R 100 -11.4 -5.69068 | opp_overlap 1079946 TAAAAACACAAAAAA GCAGGCGG CGAA CCGCCTAC TTGCGGGGTTACCCT YPO0973 1080537 - 1080046 - | hypothetical protein YPO0974 1082277 - 1080541 - | putative OmpA-family membrane protein TERM 1122 1081190 - 1081160 - G 77 -10.4 -3.61398 | GCTTTCGGGGAATAA TCCGTCATCGCCAC GCT GTGGTACTGACGGA TATCAAAGGCCACCC YPO0975 1082963 - 1082277 - | hypothetical protein TERM 1123 1082673 - 1082656 - G 74 -2.6 -5.09225 | overlap 1082657 1082658 AGGGTATTGAAAAAA TGCGCC TGTAAG GGCGAA TGGCACCACACGAAG YPO0976 1084312 - 1082960 - | hypothetical protein YPO0977 1085868 - 1084324 - | hypothetical protein TERM 1124 1085823 - 1085845 + g 71 -6.3 -4.34402 | gap 1, overlap 1085824 TATTCTTTAATACGG TCGT-CGCAG TACC CTGCGCACGG TTTTCCTGTACAGAC YPO0978 1086411 - 1085911 - | hypothetical protein YPO0980 1088155 - 1087811 - | putative phage protein (partial) TERM 1125 1088039 - 1088028 - G 91 -3 -5.84011 | AATAAAAAATAAAAA GATA TAAA TATC ATCCCAACGCTTCTG TERM 1126 1088148 - 1088158 + g 70 -2.6 -4.96773 | ATAAAAATAATTAGT TTTA ACA TAAA TTTATTTTTGATTCC insB 1088320 - 1088261 - | insertion element protein (partial) insA 1088619 - 1088356 - | insertion element protein YPO0982 1089082 - 1088687 - | putative lipoprotein YPO0983 1090183 - 1089533 - | hypothetical protein TERM 1127 1091456 - 1091440 - g 70 -2.2 -4.95957 | opp_overlap 1091440 TAAATTAAGGAAAAA GACGTT TAAGG ATCGTC TTAACTGGGAGGTGA yspI 1091363 - 1092013 + | N-acylhomoserine lactone synthase YspI yspR 1092737 - 1091994 - | quorum-sensing transcriptional regulator TERM 1128 1092763 - 1092783 + H 74 -9.8 -3.15544 | opp_overlap 1092763 1092772 1092777 CATTTACTGTACTAA GGTGCAAT AGGAA ATTGCACC TTAGTACAACTACCG TERM 1129 1092783 - 1092763 - H 74 -9.8 -3.16881 | opp_overlap 1092763, overlap 1092772 1092777 CATTTACTGTACTAA GGTGCAAT AGGAA ATTGCACC TTAGTACAACTACCG TERM 1130 1092969 - 1092913 - H 70 -3.9 -4.78157 | gap 1, opp_overlap 1092919, overlap 1092919 ACCAAAAATAATAAA GGAAAATGCTACAGAAGTGC-ACCTG TTTCTG CAAGTAGAACTTCTGTAGCATTTAAT ATAATGTCTAGCTCC TERM 1131 1092963 - 1092919 - H 100 -11.7 -4.71708 | gap 1, opp_overlap 1092919, overlap 1092913 AATAATAAAGGAAAA TGCTACAGAAGTGC-ACCTG TTTCTG CAAGTAGAACTTCTGTAGCA TTTAATATAATGTCT TERM 1132 1092919 - 1092963 + H 86 -10.2 -3.88062 | gap 1, opp_overlap 1092919 1092913 AATAATAAAGGAAAA TGCTACAGAAGTGC-ACCTGT TTCT GCAAGTAGAACTTCTGTAGCA TTTAATATAATGTCT TERM 1133 1093582 - 1093564 - g 73 -11 -2.88579 | opp_overlap 1093562 1093559 1093564 1093566, overlap 1093566 CTAATCCGGCAGATA TAGCGCCC TCA GGACGCTA TATGATTATAGCGCT YPO0986 1093299 - 1094675 + | hypothetical protein TERM 1134 1094849 - 1094888 + F 100 -15.4 -5.93809 | opp_overlap 1094856 1094882 ATTGTCCCTTCCCTA TGATAAATTTCATGCTAA TAAT TAAGCATGAAATTTATCA TTTTTTTTATAAAAA TERM 1135 1094881 - 1094856 - f 74 -7.7 -3.96148 | opp_overlap 1094849 CTTCCCTATGATAAA TTTCATGCTAA TAAT TAAGCATGAAA TTTATCATTTTTTTT YPO0987 1095052 - 1095885 + | hypothetical protein YPO0988 1097398 - 1096175 - | hypothetical protein TERM 1136 1096626 - 1096609 - G 71 -6.3 -4.42238 | gap 1, overlap 1096610 1096611 CTATGCTAAGCAAAA TG-GCCAC GTG GTGGCTCA CCGTGGTGGCCGAAT TERM 1137 1098475 - 1098451 - H 70 -7.8 -3.63744 | opp_overlap 1098451 1098450, overlap 1098449 1098452 CCTGTCGGTAAAAGA GGCCAAACGC GGTAT GCGCTTGGCA CGTTTGGCTCAAACG TERM 1138 1098474 - 1098452 - H 81 -11.3 -2.78032 | opp_overlap 1098451 1098450, overlap 1098451 1098449 CTGTCGGTAAAAGAG GCCAAACGC GGTAT GCGCTTGGC ACGTTTGGCTCAAAC iucB 1099293 - 1100243 + | putative siderophore biosynthesis protein IucB iucC 1100240 - 1101988 + | putative siderophore biosynthesis protein IucC TERM 1139 1102862 - 1102840 - g 70 -3.3 -4.8048 | gap 1, overlap 1102842 GTGTTACATGAAAAA CCGTGGGCGC GCCT GCTCCC-CAG CCGCTCACTGACCAA iucD 1101985 - 1103313 + | putative siderophore biosynthesis protein IucD iutA 1103385 - 1105565 + | putative ferric siderophore receptor TERM 1140 1105678 - 1105633 - T 80 -10 -3.73914 | opp_overlap 1105633 1105637, overlap 1105637 ATCACCCATCAATAA TTA-AGGGGCTTTGCGCAAAAT TAAG ACATTGCGCAA-GCCCCTATAA TTTGTTTATGGCAAT TERM 1141 1105633 - 1105678 + T 82 -7.9 -4.55697 | opp_overlap 1105633 1105637, overlap 1105637 ATCACCCATCAATAA TTA-AGGGGCTTTGCGCAA AATTAAGACA TTGCGCAA-GCCCCTATAA TTTGTTTATGGCAAT TERM 1142 1105673 - 1105637 - T 100 -12.4 -3.56142 | gap 1, opp_overlap 1105633 1105637, overlap 1105633 CCCATCAATAATTAA GGGGCTTTGCGCAAAAT TAAG ACATTGCGCAA-GCCCC TATAATTTGTTTATG TERM 1143 1105637 - 1105673 + T 77 -10.3 -3.16414 | gap 1, opp_overlap 1105637 1105633, overlap 1105633 CCCATCAATAATTAA GGGGCTTTGCGCAA AATTAAGACA TTGCGCAA-GCCCC TATAATTTGTTTATG YPO0995 1107257 - 1105824 - | Sodium:galactoside symporter family protein TERM 1144 1106537 - 1106558 + g 71 -5.1 -4.44211 | gap 1, overlap 1106537 1106538 TTAGCGTGACCTTTT C-CGTCACCG TGA CGTTGACGCG TTCTTTTGTATTAAA TERM 1145 1107519 - 1107465 - H 100 -13.8 -3.30771 | gap 1, opp_overlap 1107469 1107474 1107479 TCAGAGGGGTCATAA TGCACTGAACC-CCAGATCTTGGAT CTTTTT ATCCATGATCTGGAGGTTCGGTTCA ATGAAACACCCTTTT TERM 1146 1107469 - 1107515 + H 100 -15.4 -3.05384 | gap 1, opp_overlap 1107465, overlap 1107474 1107479 AGGGGTCATAATGCA CTGAACC-CCAGATCTTGGAT CTTTTT ATCCATGATCTGGAGGTTCGG TTCAATGAAACACCC TERM 1147 1107474 - 1107510 + H 77 -10.3 -3.19192 | gap 1, opp_overlap 1107465, overlap 1107469 1107479 TCATAATGCACTGAA CC-CCAGATCTTGGAT CTTTTT ATCCATGATCTGGAGG TTCGGTTCAATGAAA TERM 1148 1107479 - 1107489 + H 75 -5.4 -4.88736 | opp_overlap 1107465, overlap 1107474 1107469 ATGCACTGAACCCCA GATC TTG GATC TTTTTATCCATGATC YPO0996 1107499 - 1108035 + | insertion element IS1661 DNA-binding protein TERM 1149 1108855 - 1108837 - g 71 -11 -2.73735 | overlap 1108827 1108825 1108848 AAACAGGCGGAATGA GTCCGGCA GAA TACCGGAC TCAGGTAGAAAAGCA YPO0997 1108089 - 1108874 + | transposase for insertion sequence IS1661 YPO0998 1111436 - 1109070 - | hypothetical protein TERM 1150 1110690 - 1110713 + g 73 -8.8 -3.67597 | opp_overlap 1110685 TAACCAATCACTGGC CGATTCTGCC ACAT GGCGGAAACG TTCTTCGCTGGCAGC YPO0999 1111637 - 1111440 - | hypothetical protein YPO1000 1112076 - 1113353 + | putative drug efflux protein TERM 1151 1114692 - 1114725 + G 70 -8.9 -3.52906 | gap 1, overlap 1114690 AGCCAGATTGCCGGG CCGATCATCGCCACCA CAC TGGTGTTGATGG-CGG TATTTGTGCCAATCG TERM 1152 1114840 - 1114854 + G 70 -9.2 -3.50853 | overlap 1114830 CGTTAACGCTGAGTC CGGCGC TGT GTGCCG TTCTGCTTAAGCGGC YPO1001 1113366 - 1116485 + | putative integral membrane efflux protein TERM 1153 1116554 - 1116595 + T 86 -11.5 -3.34715 | opp_overlap 1116557 1116558, overlap 1116553 1116555 ATGCTGTTTTGTCAT AAAGCCCATACCCGCCGGT TAAG ACCGGTGGGTATGGGTGAC TCTTTGGGGGCAGTG TERM 1154 1116555 - 1116594 + T 100 -15 -2.60615 | opp_overlap 1116557 1116558, overlap 1116554 1116553 TGCTGTTTTGTCATA AAGCCCATACCCGCCGGT TAAG ACCGGTGGGTATGGGTGA CTCTTTGGGGGCAGT TERM 1155 1116592 - 1116557 - T 100 -17.6 -3.85698 | opp_overlap 1116555 1116554 1116553, overlap 1116558 CTGTTTTGTCATAAA GCCCATACCCGCCGGT TAAG ACCGGTGGGTATGGGT GACTCTTTGGGGGCA TERM 1156 1116591 - 1116558 - T 100 -21.1 -2.91276 | opp_overlap 1116555 1116554 1116553, overlap 1116557 TGTTTTGTCATAAAG CCCATACCCGCCGGT TAAG ACCGGTGGGTATGGG TGACTCTTTGGGGGC YPO1002 1118110 - 1116620 - | enterotoxin-like protein TERM 1157 1118322 - 1118340 + H 100 -12.4 -4.13995 | CAATTCTGCCTTTGA CCTTCCCC CAG GGGGAGGG TTTAGTTTGTAGGCA TERM 1158 1118656 - 1118675 + G 70 -2.2 -5.04733 | gap 1, overlap 1118658 1118661 1118666 GGCAACAGAAATTTG TTTATCCGC TGG GCG-ATAGA TTTTATTTGTCATTC YPO1003 1118388 - 1118975 + | hypothetical protein TERM 1159 1119197 - 1119181 - f 82 -5.9 -5.02645 | AACAAATAAAATAAA CAGTAAC TAC ATTACTG AATCATCTTGTTGTT TERM 1160 1119236 - 1119246 + F 79 -3.2 -5.35224 | ATTTAATAAATTATT GTGG TGT CTAC TTTTCTTTTTATAAG TERM 1161 1119369 - 1119379 + F 82 -3.2 -5.5208 | TTCTTGTATTTTTGT GGGA TTT TTCC TTTTTTATATTATAC TERM 1162 1120073 - 1120095 + G 72 -9.9 -3.34222 | gap 1 ATATTACTGTCAGCA CGCAGGCAGA GCTT TCTGCC-GCG TTATCCAATGGTACT TERM 1163 1124462 - 1124449 - g 71 -6.7 -4.13767 | CGTGCCACCTTAAAA CTGTC GGAT GACAG TGTGACCACCGTCGG TERM 1164 1126283 - 1126270 - g 71 -6.7 -4.13767 | CGTGCCACCTTAAAA CTGTC GGAT GACAG TGTGACCACCGTCGG TERM 1165 1130807 - 1130797 - g 72 -8.2 -3.92542 | GTCACGGTGAAACAA GCCG GGA CGGC GAATATCGCGGAGCT yapH 1119829 - 1130946 + | putative autotransporter protein TERM 1166 1130989 - 1131019 + T 100 -11.3 -5.26316 | opp_overlap 1130989 CGACATGATGATCAA CGGCGCATATT GCAGGACAG AATATGCGCCG TTTTTTATGGGATAA TERM 1167 1131019 - 1130989 - T 86 -11.3 -3.24188 | opp_overlap 1130989 CGACATGATGATCAA CGGCGCATATT GCAGGACAG AATATGCGCCG TTTTTTATGGGATAA YPO1005 1132929 - 1131049 - | putative antigenic leucine-rich repeat protein TERM 1168 1131517 - 1131536 + g 74 -3.6 -5.02231 | overlap 1131505 1131519 GACTTCGATATCATC GACTGAAT TTAC ATTCAGTG TTTTTAGTATTTTTA TERM 1169 1131868 - 1131858 - G 91 -6.8 -5.08088 | AACGGTGAAGAAAAA CGCT AAA AGCG GCTGAGTTAGCTTCT TERM 1170 1132755 - 1132767 + g 80 -10.5 -3.73647 | CTTTCATGCATTCCA CGGCG AAG CGCCG TTGTTCGTCAGTACC TERM 1171 1133084 - 1133114 + r 100 -11.3 -5.26316 | overlap 1133112 AGAATGACCTATCTA CGGCGCATATT GCAGGACAG AATATGCGCCG TTTTTTATGAGATAA TERM 1172 1133246 - 1133274 + r 90 -11 -3.9749 | gap 1 ACCCTTCCTTGGGGG GCGATCCGCACCA TCCC TGGCGCGGA-CGC TTTACTCTTCTGCCT YPO1006 1134367 - 1133492 - | putative antigenic leucine-rich repeat protein TERM 1173 1134516 - 1134546 + r 100 -11.3 -5.26316 | AGAATGACCTATCTG CGGCGCATATT GCAGGACAG AATATGCGCCG TTTTTTATGGGATAC YPO1007 1136392 - 1134575 - | putative antigenic leucine-rich repeat protein TERM 1174 1137219 - 1137239 + G 75 -8.9 -3.83756 | TTTATTTACGCGCTG GGGGTGTGC TGG GCACTCTCC TTTGGATTATCGTTT TERM 1175 1137314 - 1137335 + G 74 -7.3 -4.17556 | gap 1, opp_overlap 1137304 1137300, overlap 1137314 AGTTACCAATATGTT GG-CACCGGT TGA ACTGGTGACC TTTATTACCACTATG YPO1008 1137111 - 1138667 + | putative integral membrane efflux protein YPO1009 1138745 - 1139977 + | peptidase T TERM 1176 1140018 - 1140051 + F 100 -16.1 -3.42861 | overlap 1140014 TGCCTTATCTCCATG TAGGGTACTGGCGTG TTAG CTTGCCAGTACCCTA TTAATGTTGTGACTT TERM 1177 1140530 - 1140513 - g 76 -2.7 -5.2112 | AACAGCAGCAAAAAA CACCCAT AAGT ATAAGTG TATTAACGGGCTTTG TERM 1178 1140629 - 1140639 + G 83 -3.2 -5.44119 | AAAGCGGGCAATCCA TCTG ACG CAGG TTTTTTTACCATGCG YPO1011 1140365 - 1142437 + | putative TonB-dependent outer membrane receptor TERM 1179 1143380 - 1143396 + F 76 -7.9 -4.20106 | overlap 1143382 1143390 GATTATCAGGCTAAC TCCGGGG CTG CCCCCGA TTTTGCGTGGGATTT TERM 1180 1143382 - 1143395 + F 72 -9.5 -3.11341 | overlap 1143380 1143390 TTATCAGGCTAACTC CGGGG CTGC CCCCG ATTTTGCGTGGGATT TERM 1181 1145993 - 1146011 + F 100 -13.2 -4.01078 | CCAGGGGGTAATCTG CTCTCCTG ATT CAGGAGAG TTTATGGTCACTTTT y1093 1146015 - 1147037 + | transposase for insertion sequence IS100 TERM 1182 1147118 - 1147104 - g 77 -11.4 -3.3506 | overlap 1147095 TGGAAAGCCTTATAA GCGCAG CGC CTGCGC TGTCACAACAGGCAG YPO1014 1147034 - 1147816 + | transposase/IS protein YPO1014a 1147881 - 1148057 + | prepilin peptidase (partial) YPO1015 1148051 - 1148659 + | hypothetical protein YPO1016 1148656 - 1149126 + | hypothetical protein YPO1017 1149114 - 1149524 + | putative prepilin peptidase dependent protein recC 1149659 - 1153030 + | exonuclease V subunit gamma TERM 1183 1154217 - 1154231 + G 78 -6.4 -4.88407 | TGGCACAACGTGATG TTGTCG TCG CGGCAA TTTTTGATTACATCA TERM 1184 1154295 - 1154277 - g 95 -6 -5.52986 | AGGGGATTAAAAAAA GCTATTTC GAT GAAATTGC ACATGTATTGAATCT TERM 1185 1155436 - 1155448 + G 70 -9.1 -3.61715 | AGAAATTGCTGGTAT GGCAC GTA GTGCC TTGTTAGGGCAGATC ptr 1153112 - 1156000 + | protease III precursor TERM 1186 1157038 - 1157026 - g 70 -3.3 -4.79223 | GTACAGCAGGAAAAA CGGCA GCG TGCAG AGCTGGGGTTTGATG RecB 1155997 - 1159659 + | exonuclease V subunit beta TERM 1187 1161500 - 1161516 + G 71 -6.5 -4.1552 | overlap 1161501 CGCCATTACCCGCGC CCGTCAG CAT CTGACGC TTTATTGCAGCGATG RecD 1159656 - 1161614 + | exonuclease V subunit alpha TERM 1188 1161638 - 1161615 - T 75 -8.8 -3.66772 | opp_overlap 1161616, overlap 1161616 TTAAATCGCCAATAA TCTCAGGGCA TAAG CGCCCTGAGT TATCTGTTTCAAATA TERM 1189 1161637 - 1161616 - T 89 -12.3 -2.79581 | opp_overlap 1161616, overlap 1161615 TAAATCGCCAATAAT CTCAGGGCA TAAG CGCCCTGAG TTATCTGTTTCAAAT TERM 1190 1161616 - 1161637 + T 95 -11.6 -3.76634 | opp_overlap 1161615 1161616 TAAATCGCCAATAAT CTCAGGGC ATAAGC GCCCTGAG TTATCTGTTTCAAAT argA 1163094 - 1161769 - | N-acetylglutamate synthase YPO1023 1163330 - 1164580 + | N-acetylmuramoyl-L-alanine amidase AmiC precursor TERM 1191 1164779 - 1164766 - f 100 -8.1 -6.02919 | opp_overlap 1164766 CCAGAAACAAAAAAA CACCC GATA GGGTG TCTAATGATGATATC TERM 1192 1166432 - 1166409 - g 75 -8.8 -3.86897 | gap 1 TTCACTGCTTATAAA GGT-GGCACGC AGA GCGAGCCTACC AGTAATGATTCGTCA mltA 1165302 - 1166474 + | murein transglycosylase A TERM 1193 1166528 - 1166513 - f 86 -11.8 -3.14211 | opp_overlap 1166513 ATTTGTTTTGATTAA GCGGCC AGTT GGCCGC TTTTGCATGAGTACT TERM 1194 1166513 - 1166528 + F 100 -11.8 -4.20084 | opp_overlap 1166513 ATTTGTTTTGATTAA GCGGCC AGTT GGCCGC TTTTGCATGAGTACT TERM 1195 1167352 - 1167363 + G 71 -5.8 -4.31895 | GCAACGATGGTTACT GCCA CGTT TGGC TTTGTTGCTGTGTCT YPO1026 1166617 - 1167444 + | hypothetical protein YPO1027 1167923 - 1167480 - | hypothetical protein YPO1028 1169377 - 1168058 - | cysteine sulfinate desulfinase TERM 1196 1169618 - 1169598 - H 100 -9.7 -6.00086 | ATAGGATAAAAAAAA GCACCGCCA AAA TAACGGTGC TGCATAAAATCACTA TERM 1197 1169689 - 1169671 - H 84 -3.8 -5.54192 | opp_overlap 1169674, overlap 1169672 1169674 AGGAAGTGAAAAAAA GCAGTAGC TTA GCTACTAT GTCTGGCATACCAGA TERM 1198 1169688 - 1169672 - H 72 -7.3 -3.90888 | opp_overlap 1169674, overlap 1169671 1169674 GGAAGTGAAAAAAAG CAGTAGC TTA GCTACTA TGTCTGGCATACCAG gcvA 1169923 - 1170840 + | DNA-binding transcriptional activator GcvA TERM 1199 1171034 - 1171046 + G 100 -9.1 -5.47431 | TAATGCTGATATTTT CCGCT CTG AGCGG TTTTTTCTATGTTGC TERM 1200 1171303 - 1171345 + G 73 -6.2 -4.46404 | opp_overlap 1171307 1171310, overlap 1171307 CTGAGACTGTGGATA TATATCACGCCAGTAGGCGG AGT CTGTTTTCTGGCGGGATGGA TTTTGATGTTGATTG YPO1030 1171006 - 1171401 + | hypothetical protein YPO1031 1171394 - 1172500 + | putative RNA 2'-O-ribose methyltransferase TERM 1201 1172546 - 1172531 - T 86 -11.8 -3.16154 | opp_overlap 1172527 1172526 TAACATCATATTTAA GGGGCC TGTT GGCCCC TGAGGTTATTGACAA TERM 1202 1172627 - 1172653 + T 72 -10.1 -2.88849 | gap 1, overlap 1172622 1172628 TCCATGTAGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCTCTGCC TERM 1203 1172628 - 1172654 + T 84 -10.1 -3.82218 | gap 1, overlap 1172622 1172627 CCATGTAGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCTCTGCCT TERM 1204 1172713 - 1172736 + T 100 -14.6 -4.90455 | GGGTTTGTCAGCAGT CTGAGGGGCC TATT GGCCCCTTAG TTTTTATGCGTATAT xni 1173506 - 1172751 - | exonuclease IX TERM 1205 1173677 - 1173690 + r 75 -3.1 -5.1861 | ATTTAAATTTACTCT TGGCA GATT TGTCA TTTTTTGCTGCTCAA YPO1033 1175130 - 1173766 - | hypothetical protein TERM 1206 1174117 - 1174094 - G 75 -10.3 -3.42354 | opp_overlap 1174094 1174092 1174097 CAGTTGAAGCTATAA GCATCGCCG GTATTA CGGCGATAC TCTTTCACCAGTGGC TERM 1207 1174747 - 1174735 - G 72 -4.1 -4.90471 | ACGTAAAATAGAAAA GACCA GGT TAGTC AAATGACTGGAGCTC queF 1176128 - 1175283 - | 7-cyano-7-deazaguanine reductase syd 1176266 - 1176811 + | SecY interacting protein Syd TERM 1208 1177351 - 1177328 - f 88 -12.5 -2.67189 | opp_overlap 1177328, overlap 1177325 1177324 TATAAAACGAATTGA GGGGTACTG GTAAAA CAGTACCCC TTTTTTGTGCCCAGA TERM 1209 1177328 - 1177351 + F 100 -12.5 -5.24129 | opp_overlap 1177325 1177324 1177328 TATAAAACGAATTGA GGGGTACTG GTAAAA CAGTACCCC TTTTTTGTGCCCAGA TERM 1210 1177370 - 1177388 + F 100 -16 -3.07307 | opp_overlap 1177370 TTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC TERM 1211 1177388 - 1177370 - f 100 -16 -4.36914 | opp_overlap 1177370 TTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC tnp 1177501 - 1177959 + | transposase for the IS1541 insertion element TERM 1212 1178029 - 1178069 + F 100 -11.9 -6.17669 | opp_overlap 1178040, overlap 1178039 1178040 AGAGCCTTATAGGCG CATATGAAAAACCTCCGGC TAT GCCGGAGGATATTTATTTG TTTTTTTGTTTTGTT TERM 1213 1178039 - 1178059 + F 100 -12.5 -4.05342 | opp_overlap 1178040, overlap 1178029 1178040 AGGCGCATATGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTTGTTTTT TERM 1214 1178040 - 1178058 + F 100 -16 -2.99545 | opp_overlap 1178040, overlap 1178039 1178029 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTGTTTT TERM 1215 1178058 - 1178040 - f 100 -16 -4.8048 | opp_overlap 1178040 1178039 1178029 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTGTTTT YPO1037 1178213 - 1178545 + | hypothetical protein YPO1038 1178545 - 1179318 + | tRNA pseudouridine synthase C YPO1039 1179346 - 1179795 + | flavodoxin TERM 1216 1179816 - 1179851 + T 86 -12.1 -3.17194 | overlap 1179818 ATATCTTGATTTTAT TGCGTATTGTGGCAA GTTTCG TTGTCACAATACGTA TTCGGTTACCGAGGT TERM 1217 1179818 - 1179849 + T 93 -12.5 -3.14878 | overlap 1179816 ATCTTGATTTTATTG CGTATTGTGGCAA GTTTCG TTGTCACAATACG TATTCGGTTACCGAG YPO1040 1180274 - 1179885 - | hypothetical protein TERM 1218 1179951 - 1179976 + g 80 -2.5 -5.46706 | ATTGGTGACAACACT TTCCAGGTGAC GTAG GTCATCCAGAA TTTTTCTTTTCAAAT TERM 1219 1180388 - 1180368 - R 100 -8.3 -5.53288 | opp_overlap 1180368 1180367 1180365 1180370 CGTAAGGCAAAAAAA TAGCGGG TGGTTAG CCCGCTA CTCTTAATCTTAGTC dapD 1181222 - 1180398 - | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase glnD 1184135 - 1181397 - | PII uridylyl-transferase TERM 1220 1182193 - 1182203 + g 70 -4.6 -4.65895 | CTATTTTGCATTCCG CGGC GTA GCTG TTTTTCGGTCGCAAA TERM 1221 1184128 - 1184114 - G 100 -12.8 -5.26316 | opp_overlap 1184108 1184114 GCAGCCCATAAAAAA GCCGGC GGT GCCGGC TTGTCATTATTACTC TERM 1222 1184114 - 1184128 + g 83 -12.8 -3.6216 | opp_overlap 1184114, overlap 1184108 GCAGCCCATAAAAAA GCCGGC GGT GCCGGC TTGTCATTATTACTC ampM 1184929 - 1184138 - | methionine aminopeptidase rpsB 1185364 - 1186089 + | 30S ribosomal protein S2 TERM 1223 1186082 - 1186070 - f 76 -7.7 -4.16842 | TTCAGGCGGAAGAAA GCTTC GTA GAAGC TGAATAATAAGTCCG TERM 1224 1186145 - 1186163 + F 100 -16 -3.74792 | AAATATGTTGGTTAG GGGGGCCT TAT AGGCCCCC TTTGCATATCTAATG tsf 1186217 - 1187074 + | elongation factor Ts TERM 1225 1187107 - 1187084 - f 70 -8 -3.57561 | opp_overlap 1187084 TCTTAATGCTCCAAA TGGGGCCGCC AATA GGCGGTTCCA TTTTATTCACTCGAT TERM 1226 1187084 - 1187107 + F 100 -12.4 -4.68384 | opp_overlap 1187084 TCTTAATGCTCCAAA TGGGGCCGCC AATA GGCGGTTCCA TTTTATTCACTCGAT TERM 1227 1187666 - 1187679 + G 73 -5.3 -4.72986 | TAGCTTGCTGCGTCA TAACC GTGT GGTTA TTTTTGCTGCGGGTA TERM 1228 1187967 - 1187949 - g 71 -5.8 -4.33153 | opp_overlap 1187951, overlap 1187951 TTCAACATGAATAAA CCCGGCGC TTT GCGTCGTG TGGTGATGGGTGAGA pyrH 1187283 - 1188008 + | uridylate kinase TERM 1229 1188208 - 1188189 - g 70 -4.4 -4.65895 | gap 1, overlap 1188190 1188191 GTGCGCATGGAAAAA TGTCTGGAA GCA TTCCAGA-A CCACATTAGTAAAAT frr 1188144 - 1188701 + | ribosome recycling factor TERM 1230 1188716 - 1188745 + F 100 -11.5 -5.44721 | gap 1, opp_overlap 1188722, overlap 1188722 ATCTCTACTCGCATT GTATAAGCGTCGCC TTA GGCGGCGCTT-TGC TTTTTTTCCGGTCAT TERM 1231 1188740 - 1188722 - f 86 -11.6 -3.32963 | opp_overlap 1188716 1188722 ACTCGCATTGTATAA GCGTCGCC TTA GGCGGCGC TTTGCTTTTTTTCCG TERM 1232 1188722 - 1188740 + F 100 -13.8 -4.5187 | opp_overlap 1188722, overlap 1188716 ACTCGCATTGTATAA GCGTCGCC TTA GGCGGCGC TTTGCTTTTTTTCCG dxr 1188915 - 1190111 + | 1-deoxy-D-xylulose 5-phosphate reductoisomerase TERM 1233 1190246 - 1190265 + F 100 -8.6 -5.63504 | gap 1, opp_overlap 1190246, overlap 1190234 GCTGTCACTCCAGAA GCCGTG-AC TTG GTACACGGC TTTTTTTGTGCACTT TERM 1234 1190578 - 1190590 + G 83 -5.5 -5.06414 | GACCAAGAAGTGACC GCTCT GAT GGAGC TTTTTGTTCGAGCAC rth 1190335 - 1191093 + | undecaprenyl pyrophosphate synthetase cdsA 1191103 - 1191951 + | CDP-diglyceride synthase YPO1051 1191980 - 1193335 + | zinc metallopeptidase TERM 1235 1194382 - 1194372 - g 71 -5.4 -4.49311 | overlap 1194380 ATGATGACGATAAAA CAGT TAA ACTG CATATCAACGTGGAT YPO1052 1193372 - 1195759 + | outer membrane protein assembly factor YaeT TERM 1236 1196296 - 1196278 - g 70 -4.6 -4.6759 | opp_overlap 1196278 1196273 AAGAGCGTAACAAAA TCCTGA GCCGTAT TCAGGA TGCTGTTAAATCTGT ompH 1195917 - 1196414 + | periplasmic chaperone TERM 1237 1196467 - 1196499 + G 70 -11.4 -2.63823 | gap 1, overlap 1196464 1196463 1196497 AGTTGGATGCACAGG TGCACGGTGATGGCG ATCT TGTCATCACCG-GCA TCGCTTCTATGCATT lpxD 1196418 - 1197440 + | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase TERM 1238 1197563 - 1197575 + F 70 -2.7 -5.00616 | overlap 1197564 GTGCAGGCCGTGTTG TTGAT AGC ATCAG TTTTTTAGACAGGAA fabZ 1197598 - 1198143 + | (3R)-hydroxymyristoyl-ACP dehydratase lpxA 1198147 - 1198935 + | UDP-N-acetylglucosamine acyltransferase lpxB 1198939 - 1200123 + | lipid-A-disaccharide synthase TERM 1239 1200295 - 1200267 - g 80 -2.3 -5.50499 | overlap 1200268 1200269 1200271 GCAGATTCAAAAAAA CTCAGCGAGAAGC GCC GCCTGTCACTGTA TGACGAAATCACTGA rnhB 1200120 - 1200716 + | ribonuclease HII TERM 1240 1201780 - 1201764 - g 76 -5.1 -4.82901 | overlap 1201765 TTTCTGGTAGAAAAA GCCAAAC AAG GTTTGGA AGAACGTTTGGAATT TERM 1241 1202227 - 1202240 + G 71 -6.7 -4.25056 | overlap 1202224 TCGGCCGTGTATTAG GCCAT CCCT ATGGC TTTGTTGATCGGATC TERM 1242 1203049 - 1203026 - g 83 -5.2 -5.07486 | opp_overlap 1203026, overlap 1203028 CATGGGTAAGAAAAA CCCTGCTGAG ATGG CTAAGCAGCG TTCTGTATTTGAAGA TERM 1243 1203507 - 1203497 - g 76 -5.4 -4.8048 | opp_overlap 1203497 TGTCGATACCAAAAA GCTT AAC AAGC GTATTTTAGAAAAAC dnaE 1200846 - 1204361 + | DNA polymerase III subunit alpha TERM 1244 1204457 - 1204429 - g 71 -6.8 -4.27584 | gap 1 AGCTGGAAGCGAAAA TTGACTCGCTGAC TGCA GTCAGCC-GTCAA GACGAAAAATTAGAT TERM 1245 1205144 - 1205121 - g 76 -11 -3.31792 | CCATTAGCCGCAGAA GCGATGGGCA TTAC TGCACATCGC CTAAAAGAACTGAAG accA 1204374 - 1205333 + | acetyl-CoA carboxylase carboxyltransferase subunit alpha TERM 1246 1205356 - 1205378 + F 100 -5.5 -6.08563 | opp_overlap 1205355 1205350 1205356 GCCAACTGATAAAAG CCGGTGC GGAATTTAA GCGCCGG TTTTTTTTATCTATT YPO1061 1205517 - 1205915 + | hypothetical protein TERM 1247 1207159 - 1207179 + G 75 -9 -3.84185 | GGTATTCCCCCATGG CAGCGGGA ACGTA TTCCGCTG TTATATTTCGGTGAA tilS 1205917 - 1207299 + | tRNA(Ile)-lysidine synthetase YPO1063 1207536 - 1207853 + | putative cytochrome TERM 1248 1208103 - 1208068 - T 100 -17 -4.1043 | opp_overlap 1208075, overlap 1208075 TGTAAATAGGATAAA TGCAAAACGGGCCGCT CTTC AGCGACCCGTTTTTCA CAAGGAAGTGGAAAC TERM 1249 1208075 - 1208096 + T 100 -11.5 -4.56597 | opp_overlap 1208068 1208075 AGGATAAATGCAAAA CGGGCCGCT CTTC AGCGACCCG TTTTTCACAAGGAAG TERM 1250 1208096 - 1208075 - T 100 -13.7 -4.40173 | opp_overlap 1208075, overlap 1208068 AGGATAAATGCAAAA CGGGCCGCT CTTC AGCGACCCG TTTTTCACAAGGAAG YPO1064 1208378 - 1208118 - | Rho-binding antiterminator YPO1064a 1208565 - 1208365 - | hypothetical protein TERM 1251 1208401 - 1208416 + g 77 -11.8 -3.08679 | opp_overlap 1208399 CACCAATAAGTTAGC GGCGGC ATAG GCCGCC TGTTCCCTAACGGAG TERM 1252 1209346 - 1209321 - g 70 -9.1 -3.6445 | overlap 1209322 1209324 AGAATAATCTGGAAA TTAGTTTTGCC GAAT GGCAAAACTAC GGGCAATAAGTGTGT TERM 1253 1209345 - 1209322 - g 77 -12.6 -2.77947 | overlap 1209321 1209324 GAATAATCTGGAAAT TAGTTTTGCC GAAT GGCAAAACTA CGGGCAATAAGTGTG TERM 1254 1209343 - 1209324 - g 70 -10.8 -2.92935 | overlap 1209322 1209321 ATAATCTGGAAATTA GTTTTGCC GAAT GGCAAAAC TACGGGCAATAAGTG YPO1065 1208807 - 1209355 + | hypothetical protein YPO1066 1209358 - 1209774 + | hypothetical protein cutF 1209814 - 1210542 + | lipoprotein involved with copper homeostasis and adhesion TERM 1255 1210600 - 1210565 - T 76 -7.7 -4.23999 | gap 2, opp_overlap 1210568 CCATAGCTAAAATAA GAAGCCGCACGGTAG TTCAAGTT CT-CCG-GCGGCTTC ATCAGTAAAATACCC proS 1212394 - 1210676 - | prolyl-tRNA synthetase TERM 1256 1210740 - 1210751 + g 86 -5.8 -5.09762 | ATCATTTGTTTCTCA CCGA CGCG TCGG TTTTTGTATTCCACT YPO1069 1213205 - 1212498 - | hypothetical protein TERM 1257 1213129 - 1213149 + g 74 -3.9 -4.99645 | overlap 1213131 TCCTCAACCAAACCG GGTTGCCGT GGT ACCGCAAAC TTTTCTTTATACGGT rcsF 1213609 - 1213202 - | outer membrane lipoprotein TERM 1258 1213694 - 1213671 - R 100 -16.8 -3.97674 | opp_overlap 1213674, overlap 1213674 CTATTATTCAAATAA CAAGACGGGC TATA GCCCGTCTTG TCGATATATTCAATA TERM 1259 1213691 - 1213674 - R 100 -12.7 -4.10744 | opp_overlap 1213674, overlap 1213671 TTATTCAAATAACAA GACGGGC TATA GCCCGTC TTGTCGATATATTCA TERM 1260 1213674 - 1213691 + r 100 -12.7 -3.42583 | opp_overlap 1213674 1213671 TTATTCAAATAACAA GACGGGC TATA GCCCGTC TTGTCGATATATTCA metQ 1214542 - 1213727 - | DL-methionine transporter substrate-binding subunit YPO1072 1215259 - 1214606 - | DL-methionine transporter permease subunit TERM 1261 1214841 - 1214852 + g 74 -4.4 -4.79223 | CCGGGCAGGGCTTCT GGTA ATAA TACC TTTTTGATGATCTGC metN 1216283 - 1215252 - | DL-methionine transporter ATP-binding subunit YPO1074 1216470 - 1217036 + | D,D-heptose 1,7-bisphosphate phosphatase TERM 1262 1219321 - 1219284 - f 78 -5.7 -4.7629 | opp_overlap 1219278 1219284 1219287, overlap 1219287 TTATGAACTGAAAAA TAACGTAAAGATGACTT TACC AAGTCGTGTTTACGATA TTGCTCTTTAACAAT TERM 1263 1219318 - 1219287 - f 78 -7.4 -4.47888 | opp_overlap 1219284 1219278 1219287, overlap 1219284 TGAACTGAAAAATAA CGTAAAGATGACTT TACC AAGTCGTGTTTACG ATATTGCTCTTTAAC TERM 1264 1220777 - 1220759 - f 82 -10.3 -3.57798 | overlap 1220772 CATAAGTAACGATAA TGCGGGT GAAAA ACCCGCA CGCCGGAAGACCAAG TERM 1265 1221284 - 1221273 - f 74 -4.4 -5.06816 | ACTGTTTAATAAAAA CACA GCAC TGTG CAAACACGAAAGTGG TERM 1266 1222396 - 1222406 + F 74 -6.8 -4.27316 | opp_overlap 1222396 GGCTTAACCTTACAA CACC GAA GGTG TTTTGAATTGAGAGA TERM 1267 1222851 - 1222831 - f 100 -14.1 -4.14739 | opp_overlap 1222831 CCACTTATTGCAAAA CCCTGAATC TTA GATTCAGGG TTTTTTGCATTTATA TERM 1268 1222831 - 1222851 + F 100 -14.1 -5.24449 | opp_overlap 1222831 CCACTTATTGCAAAA CCCTGAATC TTA GATTCAGGG TTTTTTGCATTTATA TERM 1269 1223325 - 1223299 - g 71 -5.1 -4.47397 | overlap 1223304 ACAAATATATGAAAA TGAAGCGCCTG TTGGT CAGGCAATCCA AGAAAGTGGTATTAA dkgB 1223177 - 1223980 + | 2,5-diketo-D-gluconate reductase B TERM 1270 1224005 - 1224023 + F 100 -9.6 -5.83211 | AAGACACTGGACGAG CCACCTTA CAT TGAGGTGG TTTTTTATTTTGGTG YPO1076 1224015 - 1224479 + | hypothetical protein TERM 1271 1225512 - 1225526 + G 76 -3.4 -5.13354 | overlap 1225514 CGCAGTCGTGCGTTC GGCCGG CCT CTGGAC TTTATTTTTTATCGC YPO1077 1224840 - 1225622 + | hypothetical protein TERM 1272 1225649 - 1225620 - T 77 -10.9 -2.75481 | opp_overlap 1225627, overlap 1225627 GTCGAATTCCAACCA TAAAAAAGCACCT CGAA AGGTGCTTTTTGA CAGTGATTCTGGCTC TERM 1273 1225642 - 1225627 - T 100 -9 -5.37345 | opp_overlap 1225627, overlap 1225620 TCCAACCATAAAAAA GCACCT CGAA AGGTGC TTTTTGACAGTGATT TERM 1274 1225627 - 1225642 + T 100 -9 -4.60889 | opp_overlap 1225627 1225620 TCCAACCATAAAAAA GCACCT CGAA AGGTGC TTTTTGACAGTGATT mltD 1227091 - 1225664 - | membrane-bound lytic murein transglycosylase D TERM 1275 1226293 - 1226325 + g 76 -7 -4.58395 | TTATACCGTACTTTT TGCTGTTCTTGAGT AAATC ACCCAAGGCCAGCA TTTTTGGAACATAAA gloB 1227879 - 1227124 - | putative hydroxyacylglutathione hydrolase TERM 1276 1227595 - 1227630 + g 76 -3.2 -5.07107 | overlap 1227591 1227597 TTGTCCGGCAATGGT GAGGCTATCGCCAT CATTAACA ATGACGGTGGCCCC TTTTTTCGCAGTTTC TERM 1277 1228501 - 1228475 - g 75 -8.7 -3.9461 | overlap 1228476 GCCCTTCAATAAGAA CGGTGGGCACT TTATC AGTACCCACCT GCCTGCGTTGGGATG TERM 1278 1228500 - 1228476 - g 76 -12.2 -2.96444 | overlap 1228475 CCCTTCAATAAGAAC GGTGGGCACT TTATC AGTACCCACC TGCCTGCGTTGGGAT YPO1080 1227924 - 1228643 + | hypothetical protein rnhA 1229162 - 1228698 - | ribonuclease H TERM 1279 1228881 - 1228901 + g 74 -2.4 -5.11033 | overlap 1228882 1228883 GCGCACTGGCTTACG ATCGGCTG TTTTC CAGCCGCG TTTTTTCCAGTTATG dnaQ 1229232 - 1229996 + | DNA polymerase III subunit epsilon TERM 1280 1230222 - 1230196 - T 100 -15.3 -3.52113 | opp_overlap 1230196 CGCCAAAATTTAGAA GCCCTGAGTTA AGTAA TAACTCAGGGC TTTGTCGTTTCTGCT TERM 1281 1230196 - 1230222 + T 100 -15.3 -4.18303 | opp_overlap 1230196 CGCCAAAATTTAGAA GCCCTGAGTTA AGTAA TAACTCAGGGC TTTGTCGTTTCTGCT YPO1083 1231726 - 1230242 - | putative permease YPO1085 1233131 - 1232349 - | transposase/IS protein TERM 1282 1233047 - 1233061 + g 77 -11.4 -3.3506 | overlap 1233060 CTGCCTGTTGTGACA GCGCAG GCG CTGCGC TTATAAGGCTTTCCA y1093 1234150 - 1233128 - | transposase for insertion sequence IS100 TERM 1283 1234172 - 1234154 - R 100 -13.2 -4.01078 | AAAAGTGACCATAAA CTCTCCTG AAT CAGGAGAG CAGATTACCCCCTGG intA 1234340 - 1234239 - | phage integrase (partial) TERM 1284 1234450 - 1234476 + H 93 -12.2 -3.71527 | opp_overlap 1234450, overlap 1234472 TACAGACACAAAAAA GCCCGCAAACCT AGA AGGGATGCGGGC TTTCCGTACTTCACC TERM 1285 1234476 - 1234450 - H 100 -12.2 -5.4492 | opp_overlap 1234450 1234472 TACAGACACAAAAAA GCCCGCAAACCT AGA AGGGATGCGGGC TTTCCGTACTTCACC TERM 1286 1234746 - 1234729 - H 80 -9.9 -3.58305 | opp_overlap 1234728 1234726 AATCAACTTGCGAAA TGTAGCC TAAA GGCTACA ATATATTGATGAAAA YPO1087 1234752 - 1235063 + | putative prophage protein TERM 1287 1235338 - 1235327 - g 74 -4.4 -4.88228 | opp_overlap 1235327 ATCCAACACTAAAAA CACT GCTT AGTG TGGTATCTGCAACGG YPO1088 1235071 - 1235391 + | putative DNA-binding prophage protein YPO1089 1236828 - 1235740 - | putative regulatory prophage protein YPO1090 1237784 - 1236825 - | putative prophage DNA primase YPO1091 1238319 - 1237777 - | putative prophage protein YPO1092 1239408 - 1238512 - | putative DNA-binding prophage protein YPO1092a 1239711 - 1239421 - | hypothetical protein YPO1094 1239976 - 1239803 - | hypothetical protein YPO1095 1240207 - 1240434 + | hypothetical protein TERM 1288 1240451 - 1240409 - T 78 -7.1 -4.57569 | opp_overlap 1240415 CTAGCCTGCCAAAAA GAGCACTGCATGCATAT AGTGCATGA ATTTGCATGCAACGCCC CGGCTAAAACAACTG YPO1096 1242266 - 1240596 - | hypothetical protein TERM 1289 1240984 - 1240994 + g 70 -2.6 -4.91357 | TTAGATATGTCAACG TTAA CTT TTAA TTTTGTTATGTATTT TERM 1290 1241297 - 1241319 + g 73 -3.4 -5.055 | TTATTCCGTTGACTT CTGACTCTAA GGA TTCGAGTTGG TTTTTTGCAAGTTCC TERM 1291 1241485 - 1241500 + g 83 -5.4 -5.09173 | overlap 1241481 1241487 TTGGCTAATTTGATT TGCGAC TCAA GTCGTA TTTTTTCAACTCTTA TERM 1292 1241524 - 1241538 + g 100 -5 -6.47325 | overlap 1241531 ACTCTTAAGTTAGTT CTTTCT TCA AGAAGG TTTTTTTTGTTTTTT TERM 1293 1241531 - 1241547 + g 89 -2.3 -5.73339 | overlap 1241524 AGTTAGTTCTTTCTT CAAGAAG GTT TTTTTTG TTTTTTTCTGATTCT TERM 1294 1242112 - 1242098 - G 76 -4.2 -5.03747 | overlap 1242100 AAACCTCGGAAAAAA TGGGCT CAC AGCCAA AAGTCCAAAAAATCA YPO1097 1243405 - 1242317 - | hypothetical protein TERM 1295 1242992 - 1243004 + g 73 -6.3 -4.47707 | opp_overlap 1242991 CAGTTTATATGAAGC CAAGT TTA ACTTG TTGTTTTTAGTGAGG YPO1098 1244683 - 1243484 - | putative prophage integrase TERM 1296 1244609 - 1244595 - G 73 -2.8 -4.92756 | opp_overlap 1244601, overlap 1244599 ACTAGCAAAAATAAA CCATCA CCA TCATGG AGGGTTAGGTCTTTG TERM 1297 1244839 - 1244795 - R 95 -12.9 -2.96216 | opp_overlap 1244808, overlap 1244801 1244805 1244807 1244808 TTGGACTACTACAGA CACAAATAAATATCCTCCGGC ATA GCCGGAGGTTTTTCATATGCG CCTATAAGGCTCTGT TERM 1298 1244833 - 1244801 - R 100 -11.3 -4.18367 | opp_overlap 1244808, overlap 1244795 1244805 1244807 1244808 TACTACAGACACAAA TAAATATCCTCCGGC ATA GCCGGAGGTTTTTCA TATGCGCCTATAAGG TERM 1299 1244829 - 1244805 - R 100 -9.9 -4.66625 | opp_overlap 1244808, overlap 1244801 1244795 1244807 1244808 ACAGACACAAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCATATGCGCCTAT TERM 1300 1244827 - 1244807 - R 100 -12.5 -3.92887 | opp_overlap 1244808, overlap 1244805 1244801 1244795 1244808 AGACACAAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 1301 1244826 - 1244808 - R 100 -16 -2.94105 | opp_overlap 1244808, overlap 1244807 1244805 1244801 1244795 GACACAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 1302 1244808 - 1244826 + r 100 -16 -4.8048 | opp_overlap 1244808 1244807 1244805 1244801 1244795 GACACAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC tnp 1245365 - 1244907 - | transposase for the IS1541 insertion element TERM 1303 1245478 - 1245496 + r 100 -16 -4.36914 | opp_overlap 1245478 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 1304 1245496 - 1245478 - R 100 -16 -3.07307 | opp_overlap 1245478 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 1305 1245515 - 1245541 + r 93 -12.2 -3.71527 | opp_overlap 1245515, overlap 1245537 TCTGGGCACAAAAAA GCCCGCAAACCT AGA AGGGATGCGGGC TTTCCGTACTTCACC TERM 1306 1245541 - 1245515 - R 100 -12.2 -5.24129 | opp_overlap 1245515 1245537 TCTGGGCACAAAAAA GCCCGCAAACCT AGA AGGGATGCGGGC TTTCCGTACTTCACC smpB 1246482 - 1246000 - | SsrA-binding protein YPO1102 1246643 - 1247077 + | hypothetical protein YPO1103 1247070 - 1247354 + | hypothetical protein TERM 1307 1247373 - 1247351 - T 78 -4.1 -5.1101 | opp_overlap 1247352, overlap 1247352 1247355 TGAGCAGGCAAAAAA GTAAGGCAC AATCA GCGCCTTAT TTTTTGTTGTCACTC TERM 1308 1247352 - 1247372 + T 87 -5.4 -5.56673 | opp_overlap 1247351 1247352 1247355 GAGCAGGCAAAAAAG TAAGGCAC AATCA GCGCCTTA TTTTTTGTTGTCACT TERM 1309 1247372 - 1247352 - T 70 -7.6 -3.65883 | opp_overlap 1247352, overlap 1247351 1247355 GAGCAGGCAAAAAAG TAAGGCAC AATCA GCGCCTTA TTTTTTGTTGTCACT YPO1104 1247854 - 1247504 - | hypothetical protein TERM 1310 1247573 - 1247589 + g 76 -3 -5.14563 | ATCAAAGGTCAACGT TAACGT TTGTT GCGTTA TTTTTTCGTGACCAG YPO1105 1249638 - 1247959 - | recombination and repair protein ppnK 1250588 - 1249707 - | inorganic polyphosphate/ATP-NAD kinase YPO1107 1250712 - 1251290 + | heat shock protein GrpE TERM 1311 1251325 - 1251309 - T 85 -9.4 -4.19238 | GCTCTAACGTTAAAA GGCACC TCAAC GGTGCC TCAAATTGCTAACAA TERM 1312 1251337 - 1251368 + T 79 -10.9 -3.09823 | opp_overlap 1251342, overlap 1251331 1251342 TGCCTCAAATTGCTA ACAAAGTCCTGGC CTCCTA GCCGGGACTTTGC TCTAATTTTACGCGG TERM 1313 1251363 - 1251342 - T 76 -7.9 -4.19371 | opp_overlap 1251337 1251331 1251342 CAAATTGCTAACAAA GTCCTGGCC TCCT AGCCGGGAC TTTGCTCTAATTTTA TERM 1314 1251342 - 1251363 + T 83 -9.4 -3.92694 | opp_overlap 1251342, overlap 1251337 1251331 CAAATTGCTAACAAA GTCCTGGC CTCCTA GCCGGGAC TTTGCTCTAATTTTA gltA 1252678 - 1251398 - | type II citrate synthase sdhC 1253388 - 1253777 + | succinate dehydrogenase cytochrome b556 large membrane subunit sdhD 1253771 - 1254118 + | succinate dehydrogenase cytochrome b556 small membrane subunit TERM 1315 1254840 - 1254871 + G 74 -11.6 -3.18264 | gap 1, opp_overlap 1254825 1254832, overlap 1254842 TGGAAATGTGGCAGT TCCACCCG-ACCGGT ATT GCCGGTGCGGGTGTA TTAGTGACTGAAGGC TERM 1316 1254842 - 1254869 + G 86 -14.2 -3.1552 | gap 1, opp_overlap 1254825 1254832, overlap 1254840 GAAATGTGGCAGTTC CACCCG-ACCGGT ATT GCCGGTGCGGGTG TATTAGTGACTGAAG sdhA 1254119 - 1255885 + | succinate dehydrogenase flavoprotein subunit sdhB 1255935 - 1256651 + | succinate dehydrogenase iron-sulfur subunit TERM 1317 1256790 - 1256811 + F 86 -12.3 -2.53263 | opp_overlap 1256790 ATGTGAGTTTATTAA CCCGGAGAG GGGA TTCTCCGGG TAGCTTCACGGTAGG TERM 1318 1256811 - 1256790 - f 84 -11.6 -3.16683 | opp_overlap 1256790 ATGTGAGTTTATTAA CCCGGAGA GGGGAT TCTCCGGG TAGCTTCACGGTAGG TERM 1319 1256914 - 1256900 - f 70 -7.1 -3.75378 | AGGTCCATAACAGAA CGTGC ATTGA GCACG TCGAGTGAACCGTTT TERM 1320 1257066 - 1257093 + G 76 -6.4 -4.68994 | gap 1, opp_overlap 1257066, overlap 1257069 GGCGGGCGCGAACCA GTCCTACATAGAG CAG CTCTATGAA-GAC TTTTTAACTGATCCT TERM 1321 1257566 - 1257550 - g 83 -5.1 -5.12971 | opp_overlap 1257550 1257548, overlap 1257551 AACACCGAAGAAAAA CGCTG GATTCAG CAGCG TATTGAATCGGTTGT TERM 1322 1258686 - 1258669 - g 74 -8.3 -4.08919 | AAAGTTGAAATGAAA CGCCTGC AAGA GCTGGCG CGTCGGATCAGCTCT kgd 1257007 - 1259814 + | alpha-ketoglutarate decarboxylase sucB 1259844 - 1261067 + | dihydrolipoamide acetyltransferase TERM 1323 1261152 - 1261139 - f 70 -9.5 -2.81045 | overlap 1261136 TTATCCAGAACACTA CGGGC TTCG GCCCG TCTCAGACCTTATAT TERM 1324 1261434 - 1261420 - g 74 -2.1 -5.08824 | overlap 1261421 TGGCTAGGTAAAAAA CTGGT CACTT ACCAA ACAGATGCCAACGGA sucC 1261180 - 1262346 + | succinyl-CoA synthetase subunit beta sucD 1262346 - 1263218 + | succinyl-CoA synthetase subunit alpha TERM 1325 1263265 - 1263282 + F 100 -12.7 -5.252 | opp_overlap 1263263 CTAACGCGACATACT GGCCACC TTTT GGTGGCC TTTTTTATACAAATG TERM 1326 1263520 - 1263504 - f 70 -3.7 -4.7889 | overlap 1263512 ATAAATATGTAAAAA TCAAAAC TGT GATTTGA CTCACTCTGAATTTA TERM 1327 1263723 - 1263744 + F 70 -8.1 -3.62046 | opp_overlap 1263723 1263722 CATATAGGCTTAAAT TGTCGTAGA TCAA TTTACGACA TTGTTACCAAAATGC TERM 1328 1264029 - 1264045 + G 76 -5.1 -4.87786 | ACAGTTTGCCTTAAC GGCAATG TAC CATTTCC TTTTTGTCCCATTAA cydA 1263985 - 1265553 + | cytochrome D ubiquinol oxidase subunit I TERM 1329 1265712 - 1265693 - g 82 -7.2 -4.60487 | opp_overlap 1265693 TATCATCGGTAAAAA TGATACAG AGCG CCGTATCA TGATTAACTCGATTG cydB 1265568 - 1266707 + | cytochrome D ubiquinol oxidase subunit II TERM 1330 1266879 - 1266895 + G 80 -10.8 -3.69323 | opp_overlap 1266879 CGAATTAATGGATAA GGGCCC ATTGA GGGCCC TTTCACTGGTGCTCG TERM 1331 1266895 - 1266879 - g 75 -10.8 -3.45134 | opp_overlap 1266879 CGAATTAATGGATAA GGGCCC ATTGA GGGCCC TTTCACTGGTGCTCG YPO1119 1266799 - 1267131 + | hypothetical protein TERM 1332 1267151 - 1267178 + F 76 -7 -4.57218 | opp_overlap 1267149, overlap 1267154 1267155 CCTTGAGCACAATCC TACCTATGGGCC ATCC GGCCCATAATTA TTTTCGTTCTATTCT TERM 1333 1267154 - 1267175 + F 86 -8.7 -4.36586 | opp_overlap 1267149, overlap 1267151 1267155 TGAGCACAATCCTAC CTATGGGCC ATCC GGCCCATAA TTATTTTCGTTCTAT TERM 1334 1267155 - 1267174 + F 86 -12.2 -3.20325 | opp_overlap 1267149, overlap 1267154 1267151 GAGCACAATCCTACC TATGGGCC ATCC GGCCCATA ATTATTTTCGTTCTA YPO1120 1267263 - 1267664 + | acyl-CoA thioester hydrolase YbgC tolQ 1267664 - 1268350 + | colicin uptake protein TolQ tolR 1268363 - 1268791 + | colicin uptake protein TolR TERM 1335 1269319 - 1269306 - g 76 -3.1 -5.11254 | AACAACAAAAACAAA TCGCT GAAC AGCAA AAGCAGGCCGCTGAA TERM 1336 1269504 - 1269485 - g 76 -3.4 -5.15969 | overlap 1269488 GCTGAAGCCAAAAAA GAAGCTGC TGTT GCCGCTGC GGCGAAGAAACAAGC TERM 1337 1269621 - 1269611 - g 80 -2.4 -5.38047 | GATGCAGAGAAAAAA GCCG CTG CTGC TAAAAAAGTTGCTGC TERM 1338 1269681 - 1269659 - g 100 -9 -5.46657 | opp_overlap 1269678 1269680, overlap 1269631 1269661 GAGGCCAAGAAAAAA GCGGCAGCAG AAG CGGCTGCCTC AACGGATGTTGATGA TERM 1339 1269679 - 1269661 - g 70 -10.2 -2.91061 | opp_overlap 1269678, overlap 1269631 1269659 GGCCAAGAAAAAAGC GGCAGCAG AAG CGGCTGCC TCAACGGATGTTGAT TERM 1340 1269751 - 1269727 - g 73 -5.1 -4.70879 | gap 1 GGCAAACGCTAAAAA TGCA-CCGAA GAGTGG TTCGGGTGCA GGTGCCGCTGCTGCC tolA 1268903 - 1270069 + | cell envelope integrity inner membrane protein TolA tolB 1270189 - 1271481 + | translocation protein TolB pal 1271532 - 1272038 + | peptidoglycan-associated outer membrane lipoprotein YPO1126 1272048 - 1272857 + | hypothetical protein TERM 1341 1272867 - 1272901 + F 100 -14.4 -4.0162 | CTTTAGCTTTTTTGA GCCCAGGATTTAGTCA ATT TGACTGATTTCTGGGC TTTATCGTGTGAAGA TERM 1342 1273346 - 1273331 - f 73 -9 -3.5399 | overlap 1273334 AGCAGAGCGAGACAA CAACGC GCCA GCGTTG ACCCGAAGGGCGAGT TERM 1343 1273581 - 1273591 + F 70 -5.4 -4.54026 | opp_overlap 1273566, overlap 1273566 1273565 TTTGGCGACTTTTTG CCAA ATA TTGG TTATTTTGTTTAGGA TERM 1344 1274472 - 1274488 + G 76 -4.4 -5.02074 | gap 1 GAAAACGTTAATTGT TGCCACC GATC GG-GGCA TTTTTTACAAGATGC nadA 1273693 - 1274754 + | quinolinate synthetase pnuC 1274876 - 1275601 + | intergral membrane NMN transport protein PnuC YPO1129 1276654 - 1275716 - | zinc transporter ZitB TERM 1345 1277526 - 1277504 - R 73 -9 -3.51411 | opp_overlap 1277513 1277514, overlap 1277500 ACTCGTCGAAATTAA CGACAGCGGG TTA CCGGCCGCCG GTGAGTTTTTGGATA TERM 1346 1277513 - 1277531 + r 73 -5.2 -4.72333 | opp_overlap 1277504 1277500, overlap 1277514 AATTAACGACAGCGG GTTACCGG CCG CCGGTGAG TTTTTGGATATGATT TERM 1347 1277514 - 1277530 + r 73 -8.7 -3.42315 | opp_overlap 1277504 1277500, overlap 1277513 ATTAACGACAGCGGG TTACCGG CCG CCGGTGA GTTTTTGGATATGAT TERM 1348 1277679 - 1277663 - R 93 -8.7 -4.56597 | CGTTGGTTTTAAAAA TGGTACC GAC GGCACCA TTAAAGTGGCTATTG TERM 1349 1277711 - 1277725 + r 70 -5.7 -4.33417 | opp_overlap 1277705 TGCGATCAACGCGGC CAGTG CCCCA CACTG TTTCTTGTCGGTGAC YPO1131 1278911 - 1278129 - | transposase/IS protein TERM 1350 1278827 - 1278841 + g 77 -11.4 -3.3506 | overlap 1278840 CTGCCTGTTGTGACA GCGCAG GCG CTGCGC TTATAAGGCTTTCCA y1093 1279930 - 1278908 - | transposase for insertion sequence IS100 TERM 1351 1279952 - 1279934 - R 100 -13.2 -4.01078 | AAAAGTGACCATAAA CTCTCCTG AAT CAGGAGAG CAGATTACCCCCTGG TERM 1352 1280245 - 1280268 + r 100 -7.5 -5.62219 | gap 1, opp_overlap 1280245 GCCGTCAATAAAAAA CCCCG-ACAT TATTC ATGTACGGGG TTTTTTTACTGTGTT TERM 1353 1280268 - 1280245 - R 95 -7.5 -5.4505 | gap 1, opp_overlap 1280245 GCCGTCAATAAAAAA CCCCG-ACAT TATTC ATGTACGGGG TTTTTTTACTGTGTT gpm 1281048 - 1280296 - | phosphoglycerate mutase 1 psiF 1281730 - 1281395 - | putative starvation-inducible protein galK 1284237 - 1283086 - | galactokinase galT 1285286 - 1284234 - | galactose-1-phosphate uridylyltransferase galE 1286312 - 1285296 - | UDP-galactose-4-epimerase TERM 1354 1285459 - 1285478 + g 73 -9.2 -3.76224 | opp_overlap 1285453 GGGGCAAAATGGTAG GCCAGTGG TTTA CCACAGGC TTTACTGAATGCGGC TERM 1355 1286122 - 1286111 - G 70 -4.4 -4.60487 | GATGAGCCGCAAAAA TGCT ATCG AGCA GTGTGCGATCACGGA YPO1140 1287490 - 1286672 - | hypothetical protein TERM 1356 1287081 - 1287097 + g 78 -3.6 -5.09426 | ACAACCCAACCCATG CGCCCG ACTGA TGGGTG TTTTTTCACCTTGAA TERM 1357 1287547 - 1287557 + r 78 -2.4 -5.44119 | CCTAAATGACGGTTT AGCC TAA GGCA TTTTTTTGAGCTAAA modF 1289197 - 1287707 - | putative molybdenum transport ATP-binding protein modF TERM 1358 1288128 - 1288113 - G 78 -4 -5.16572 | gap 1, overlap 1288124 1288127 ATCGAATCGAAAAAA CCG-GAT AAA ATCACGG TACGTACACGGGTGC TERM 1359 1288858 - 1288832 - G 70 -8.7 -3.59979 | overlap 1288834 GTGGCTGATTCCAAA TAGCGCTGCCA GTTGT TGACAGCGCTG CGGGTCACGGGCCGC TERM 1360 1288856 - 1288834 - G 77 -11.3 -3.38046 | overlap 1288832 GGCTGATTCCAAATA GCGCTGCCA GTTGT TGACAGCGC TGCGGGTCACGGGCC modE 1290098 - 1289307 - | DNA-binding transcriptional regulator ModE TERM 1361 1290320 - 1290359 + H 78 -9.6 -3.59279 | gap 1, opp_overlap 1290322 1290334, overlap 1290352 ATAACAGGGTTAATT CATTGCTG-ATATCATTTA CAG TAAATGATAGGCAGCAGTG TTGGTTATTGTGATA YPO1144 1290415 - 1290567 + | hypothetical protein TERM 1362 1290618 - 1290641 + F 89 -7.4 -5.04175 | TCTCTGATTTCTGAA TGCCTGGCGT ATAA ACGTTGGGCA TTTTTGTATCATTCC TERM 1363 1291012 - 1291041 + G 71 -5 -4.44046 | gap 1 TCCACGCTGGCACGG CAGATTGAGCAGG GGGCA CCGGC-CGATCTG TTTATTTCCGCTGAC modA 1290802 - 1291581 + | molybdate transporter periplasmic protein TERM 1364 1291737 - 1291764 + G 73 -10.6 -3.19657 | overlap 1291732 1291730 1291740 GACAGTGTGATTCAT TTGCCACTGGTG CTGC CACCGGTGGTGA TTGGCTATCTCTTGT TERM 1365 1291740 - 1291761 + G 74 -12.3 -2.78422 | overlap 1291737 1291732 1291730 AGTGTGATTCATTTG CCACTGGTG CTGC CACCGGTGG TGATTGGCTATCTCT modB 1291581 - 1292276 + | molybdate ABC transporter permease protein TERM 1366 1292274 - 1292256 - f 100 -8.8 -5.01732 | overlap 1292257 AATTGGGGTAAAAAA CGCATGGG GGC CCCATGCT AGAACTGAATTTCAG TERM 1367 1292273 - 1292257 - f 100 -12.3 -3.60316 | overlap 1292256 ATTGGGGTAAAAAAC GCATGGG GGC CCCATGC TAGAACTGAATTTCA modC 1292270 - 1293349 + | molybdate transporter ATP-binding protein YPO1148 1294226 - 1293405 - | phosphotransferase YPO1149 1294517 - 1295521 + | 6-phosphogluconolactonase bioA 1296974 - 1295706 - | adenosylmethionine--8-amino-7-oxononanoate transaminase TERM 1368 1295840 - 1295830 - G 74 -6.8 -4.36914 | CCCTGTTCGACAAAA CTGC GTT GCAG GCGGGCGACATTAAC bioB 1297073 - 1298110 + | biotin synthase bioF 1298110 - 1299261 + | 8-amino-7-oxononanoate synthase TERM 1369 1299772 - 1299783 + G 76 -3 -5.09426 | opp_overlap 1299782 GGTGGATGGTCAGCG TCAT GTAA ATGA TTTTTTGCCATTGCA bioC 1299245 - 1300048 + | biotin synthesis protein BioC TERM 1370 1300254 - 1300267 + G 79 -5.3 -5.00616 | opp_overlap 1300254 CTCGGTTACTCACAA GTGAA TCCG TTCAC TTTTTTGGAAGCGAC bioD 1300041 - 1300763 + | dithiobiotin synthetase YPO1155 1301625 - 1300915 - | putative amino acid transporter TERM 1371 1301288 - 1301268 - G 90 -9 -4.6856 | gap 1, opp_overlap 1301267 1301268 GAAATAGCTCAAAAA CCCAGCCCG GAAT CGGG-TGGG ATTTGTGGCGGCCTG TERM 1372 1301396 - 1301419 + g 74 -8.2 -4.09739 | CCTAACGCATTGCGT CTTTCAACAG GCTG CTGTTGCAAG TTTTGCGGGGGTTCA TERM 1373 1302823 - 1302804 - g 71 -7.8 -4.08216 | overlap 1302805 1302819 1302821 GGAGGGGCTGGAAAA TGGTCTGG CACA CCAGACCC TGCTAGGCGTAACAG TERM 1374 1302822 - 1302805 - g 74 -11.3 -3.04715 | overlap 1302804 1302819 1302821 GAGGGGCTGGAAAAT GGTCTGG CACA CCAGACC CTGCTAGGCGTAACA uvrB 1302715 - 1304730 + | excinuclease ABC subunit B YPO1157 1305022 - 1305267 + | hypothetical protein YPO1158 1306321 - 1305398 - | hypothetical protein moaA 1306853 - 1307833 + | molybdenum cofactor biosynthesis protein A moaC 1307934 - 1308413 + | molybdenum cofactor biosynthesis protein C moaD 1308410 - 1308655 + | molybdopterin synthase small subunit MoaE 1308655 - 1309110 + | molybdopterin synthase large subunit TERM 1375 1309453 - 1309466 + G 85 -3.8 -5.38549 | overlap 1309451 TGGCTTGATTATTGC CCAG CTTGGT CTGG TTTTTGTTATTTCCG YPO1163 1309253 - 1309963 + | hypothetical protein TERM 1376 1310026 - 1310046 + F 100 -11.2 -5.18726 | opp_overlap 1310026 GTTTGAGATAGTAAA GGACACCA AAATC TGGTGTCC TTTTTGTTGTGCCCA TERM 1377 1310046 - 1310026 - f 100 -11.9 -3.88498 | opp_overlap 1310026 GTTTGAGATAGTAAA GGACACCAA AAT CTGGTGTCC TTTTTGTTGTGCCCA TERM 1378 1310067 - 1310085 + F 100 -16 -3.07307 | opp_overlap 1310067 GTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC TERM 1379 1310085 - 1310067 - f 100 -16 -4.36914 | opp_overlap 1310067 GTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC tnp 1310198 - 1310656 + | transposase for the IS1541 insertion element TERM 1380 1310730 - 1310762 + T 100 -11.3 -5.63517 | opp_overlap 1310737, overlap 1310736 1310737 CCTTATAGGCGCATA TGAAAAACCTCCGGC TAT GCCGGAGGATATTTA TTTTTTCTTTCACCA TERM 1381 1310736 - 1310756 + T 100 -12.5 -4.1934 | opp_overlap 1310737, overlap 1310730 1310737 AGGCGCATATGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTTTTTCTT TERM 1382 1310737 - 1310755 + T 100 -16 -3.07944 | opp_overlap 1310737, overlap 1310736 1310730 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTTTTCT TERM 1383 1310755 - 1310737 - T 100 -16 -4.8048 | opp_overlap 1310736 1310730 1310737 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTTTTCT betA 1312588 - 1310885 - | choline dehydrogenase betB 1314083 - 1312611 - | betaine aldehyde dehydrogenase TERM 1384 1313928 - 1313940 + g 73 -10.5 -3.3197 | CTGACCTTGTTTGGC GGCGG CTA CCGCC TTATCAACATCCTGT betI 1314737 - 1314141 - | transcriptional regulator BetI TERM 1385 1314560 - 1314576 + g 74 -4.4 -4.82901 | opp_overlap 1314552, overlap 1314552 TCAGATACCTCATTG TGGCTT CTAGC AGGCCA TTTTTGTCACGGAAA TERM 1386 1314783 - 1314798 + H 75 -10.4 -2.73542 | AATACTGTTATTCAT GCTGCC TATT GGCAGC TAGTTACCCGTTACG TERM 1387 1315170 - 1315188 + G 77 -9.5 -3.7319 | GGTGTTCTTTACGTC CGCGGGG TTGAT CCTCGCG TTCTGTCTTATGACT betT 1315102 - 1317123 + | choline transport protein BetT YPO1169 1317355 - 1318248 + | DNA-binding transcriptional activator XapR YPO1170 1319167 - 1318286 - | hypothetical protein xapA 1319480 - 1320343 + | purine nucleoside phosphorylase TERM 1388 1321120 - 1321105 - f 77 -4.8 -4.9138 | opp_overlap 1321105 ATTATTTAAACAAAA GAAAAT GGCT ATTTTC TTCTTGTTGTGCCCA TERM 1389 1321159 - 1321141 - f 100 -16 -4.36914 | opp_overlap 1321141 GTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC TERM 1390 1321141 - 1321159 + F 100 -16 -3.07307 | opp_overlap 1321141 GTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC tnp 1321272 - 1321730 + | transposase for the IS1541 insertion element TERM 1391 1321808 - 1321832 + F 100 -9.9 -4.55697 | opp_overlap 1321811, overlap 1321810 1321811 ATAGGCGCATATGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTTATCAAAAT TERM 1392 1321810 - 1321830 + F 100 -12.5 -3.88703 | opp_overlap 1321811, overlap 1321808 1321811 AGGCGCATATGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTTATCAAA TERM 1393 1321829 - 1321811 - f 100 -16 -4.8048 | opp_overlap 1321810 1321808 1321811 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTATCAA TERM 1394 1321811 - 1321829 + F 100 -16 -2.92499 | opp_overlap 1321811, overlap 1321810 1321808 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTATCAA TERM 1395 1322420 - 1322394 - g 80 -9.5 -4.11404 | opp_overlap 1322398, overlap 1322396 TCTATAGTAGATAAA GACATCACCAC AGTAA GTGGTGATGTT AACGCGGTGAATTCG TERM 1396 1322418 - 1322396 - g 82 -12.1 -3.65001 | opp_overlap 1322398, overlap 1322394 TATAGTAGATAAAGA CATCACCAC AGTAA GTGGTGATG TTAACGCGGTGAATT TERM 1397 1322825 - 1322847 + G 70 -8.6 -3.72374 | opp_overlap 1322819 1322825 1322826, overlap 1322819 1322818 1322823 1322826 TTCAGGAGAGGTAAA TTTTACCATT ACT AATGGTAAAG TATTTGTTAATGAAC YPO1174 1322145 - 1323074 + | hypothetical protein TERM 1398 1323090 - 1323138 + F 88 -9.8 -4.07687 | gap 1, opp_overlap 1323120, overlap 1323093 AATACGTATTTAGAC TATCTCTTTGGCAATGTCCATTT TCAT AAATGGGCATTGCCCATGGG-TA TTTTACCACACGACT TERM 1399 1323093 - 1323136 + F 100 -14 -3.63744 | opp_overlap 1323120, overlap 1323090 ACGTATTTAGACTAT CTCTTTGGCAATGTCCATTT TCAT AAATGGGCATTGCCCATGGG TATTTTACCACACGA TERM 1400 1323132 - 1323120 - f 78 -9.1 -3.87815 | opp_overlap 1323093 1323090 GTCCATTTTCATAAA TGGGC ATT GCCCA TGGGTATTTTACCAC YPO1175 1323368 - 1324312 + | tRNA-dihydrouridine synthase C pbpG 1324904 - 1325839 + | D-alanyl-D-alanine endopeptidase TERM 1401 1325892 - 1325863 - T 95 -12.3 -3.35996 | opp_overlap 1325863 CATCGCGACTGAGAA GCGGAATTTGC TAGCAGAG GCAAATTCCGC TTTAGTGACTAATTG TERM 1402 1325863 - 1325892 + T 100 -13 -3.7791 | opp_overlap 1325863 CATCGCGACTGAGAA GCGGAATTTGCT AGCAGA GGCAAATTCCGC TTTAGTGACTAATTG dld 1327675 - 1325960 - | D-lactate dehydrogenase TERM 1403 1326761 - 1326733 - G 70 -3.2 -4.87626 | gap 1 CCGCAATATCAAAAA TATCAC-GGTGCA GATA TTCACCCGCGATA GGTAAATGTTTAAAG TERM 1404 1328344 - 1328334 - g 71 -6.8 -4.13995 | opp_overlap 1328333 GCTTGATAAATTAAA GGCA GAA TGCC GTGATTTTGCCAATA cyaB 1327882 - 1328421 + | adenylate cyclase 2 YPO1179 1328788 - 1328447 - | hypothetical protein TERM 1405 1328884 - 1328898 + H 76 -2.7 -5.34365 | opp_overlap 1328878 1328886 ATACTCAAACGCCAA CACGC CATTA GCGCG TTTTTCTTCTTATCG TERM 1406 1329169 - 1329182 + G 74 -2.3 -5.0707 | opp_overlap 1329143 1329170, overlap 1329170 TGCAGTCGTGCAACA AGACC TGAG GGTCG TTTATTTTTATATTT YPO1180 1329101 - 1330204 + | hypothetical protein YPO1181 1330314 - 1330637 + | hypothetical protein TERM 1407 1330773 - 1330734 - f 80 -8.7 -3.96298 | opp_overlap 1330745, overlap 1330739 1330745 CAGTCATTAATTAAA CACACGAAAAAGGTGGC TATTTT GTCACCTTTTTCACATG CAACTATCATCAATA TERM 1408 1330745 - 1330762 + F 71 -4.8 -4.62069 | opp_overlap 1330739 1330734 1330745 TAAACACACGAAAAA GGTGGC TATTTT GTCACC TTTTTCACATGCAAC TERM 1409 1331478 - 1331468 - g 73 -5.4 -4.62069 | opp_overlap 1331468, overlap 1331442 1331470 1331475 GTTGGACCCTAAAAA TACG ACA CGTA TTATGAATACGTTAC YPO1182 1330845 - 1331681 + | putative ABC transport ATP-binding subunit YPO1183 1331718 - 1332647 + | putative substrate-binding periplasmic transport protein TERM 1410 1332670 - 1332696 + F 75 -5.9 -4.70659 | gap 1, opp_overlap 1332672, overlap 1332672 1332674 CAACGGATAAAACAA CA-TGGCTCTGG TTCG CCGGAGCTATTG TTTTTAGGTGTAACA TERM 1411 1332672 - 1332693 + F 93 -8.7 -4.46215 | opp_overlap 1332672, overlap 1332670 1332674 ACGGATAAAACAACA TGGCTCTGG TTCG CCGGAGCTA TTGTTTTTAGGTGTA TERM 1412 1332674 - 1332691 + F 78 -9.1 -3.82353 | opp_overlap 1332672, overlap 1332672 1332670 GGATAAAACAACATG GCTCTGG TTCG CCGGAGC TATTGTTTTTAGGTG YPO1184 1332810 - 1333610 + | putative ABC transport membrane permease TERM 1413 1333688 - 1333666 - g 74 -4 -5.00196 | GCTGAAACAACAAAA TCCGCAGCTT TTC AGGCAGCAGA AACGTTATATCAGAT YPO1185 1333607 - 1334494 + | putative ABC transport membrane permease TERM 1414 1334662 - 1334677 + F 74 -4 -4.94243 | gap 1, overlap 1334664 1334666 CAATACTGCCCGCTA GA-CGTC AAA GACGCTC TTTTAGTTTTTTTGC TERM 1415 1335028 - 1335016 - g 73 -3.3 -5.00884 | overlap 1335017 ATTGTGTTGAAAAAA CTGCG TGT CGCAT TCGAATTGAAAGACA YPO1186 1334740 - 1335213 + | hypothetical protein TERM 1416 1335344 - 1335368 + F 72 -6.4 -4.31085 | CTGTTAGTAAAAAAA CAGGTGTGGT AATCC GCCATGCCTG TTTTAGATTAATATA YPO1187 1335648 - 1336916 + | putative substrate-binding periplasmic transport protein TERM 1417 1336976 - 1337007 + F 100 -10.9 -4.57837 | overlap 1336978 GGTAATCGCTGTGAC GTGCTGATGTCAG CGGGAT CTGACGTCAGCTC TTTTTCACCACATAT TERM 1418 1336978 - 1337005 + F 100 -12.1 -3.90316 | overlap 1336976 TAATCGCTGTGACGT GCTGATGTCAG CGGGAT CTGACGTCAGC TCTTTTTCACCACAT YPO1188 1337040 - 1338641 + | putative Branched-chain amino acid transport system, permease component TERM 1419 1339613 - 1339630 + G 83 -3.3 -5.46657 | overlap 1339614 TGGTTCACCATGGCG ATGCCGG AATA CTGGCAA TTTTTTCTTGGCCTG YPO1189 1338641 - 1339717 + | putative Branched-chain amino acid transport system, permease component YPO1190 1339714 - 1340550 + | putative ABC transport ATP-binding subunit TERM 1420 1341205 - 1341219 + G 100 -10 -4.67635 | GGGGATATGGCTATC CTGCTC GTG GAGCAG TTTTATGATTTTGCC YPO1191 1340644 - 1341342 + | putative ABC transport ATP-binding subunit YPO1192 1341457 - 1342314 + | hypothetical protein YPO1193 1342338 - 1343753 + | putative pyridoxal-dependent decarboxylase TERM 1421 1343882 - 1343900 + T 72 -8.1 -3.83026 | ATGAGTCATGTCAGT GGCTGGT GGTGA GCCAGCC TTTGGTATCACGCCA YPO1194 1344762 - 1343908 - | putative sulfurtransferase TERM 1422 1345695 - 1345684 - H 70 -5.8 -4.31737 | AAAACCACCAATAAA TCCC AACT GGGA GCAACCAAAGTCGTA TERM 1423 1346437 - 1346427 - H 71 -4 -4.7497 | overlap 1346434 CGGATTTATTAAAAA CTAA CCA TTAG CTGGGGGAGCCAGCC YPO1197 1346691 - 1347845 + | putative ABC transport integral membrane subunit YPO1198 1347842 - 1348780 + | putative ABC transport ATP-binding subunit YPO1199 1348777 - 1349613 + | putative ABC transport integral membrane subunit TERM 1424 1351122 - 1351138 + G 71 -10.9 -3.13376 | overlap 1351107 1351121 1351120 1351116 TATTTCGCCGAATGC GGCCAAA GAG TTTGGCC TGGTTTCTTCCGTTT YPO1200 1350091 - 1351425 + | arginine:agmatin antiporter TERM 1425 1353665 - 1353688 + G 71 -11.1 -2.81207 | overlap 1353664 CGGGGGAGAGTTTTG GTAGCCATG AAGAAC CATGGCTAC GTTATATCTTAAGTA YPO1201 1351495 - 1353801 + | putative amino acid decarboxylase YPO1203 1355137 - 1354247 - | hypothetical protein TERM 1426 1355485 - 1355468 - R 100 -12.7 -5.0133 | GAGTGGCGTAAAAAA GCCGGGA ATAA TCCCGGC ATAATAAATACATTC ompC2 1356664 - 1355549 - | outer membrane protein C2 TERM 1427 1355798 - 1355811 + g 73 -5.3 -4.63218 | opp_overlap 1355786 1355798, overlap 1355786 ATATTGAGCCACTAA CTCAA TGTT TTGAG TTTTATTAGCAAAAC TERM 1428 1357825 - 1357815 - g 70 -2.4 -5.02476 | ATACCGGCCAAAAAA CCCC CCT GGGC TTGCCCATCCTGAAC TERM 1429 1358177 - 1358167 - g 73 -5.4 -4.65895 | GCGGCGATGGAAAAA GCAT CGA ATGC GCCGATTTCTAAATG dinG 1356934 - 1359114 + | ATP-dependent DNA helicase DinG TERM 1430 1359160 - 1359118 - T 84 -6.5 -4.93318 | gap 1, overlap 1359120 GATAAGCCATAAAAA TACACCTCCAAATGTCAG GGGGTTAT CCAACATTTGG-GGTGCA GTTCAAAGGGGCTGA TERM 1431 1359158 - 1359120 - T 71 -6.9 -4.07789 | gap 1, overlap 1359118 TAAGCCATAAAAATA CACCTCCAAATGTCAG GGGGTTAT CCAACATTTGG-GGTG CAGTTCAAAGGGGCT katA 1360624 - 1359182 - | catalase TERM 1432 1359307 - 1359287 - G 70 -9.7 -3.31501 | overlap 1359288 AGGAACTTGCGATAA CTCACCCGC AAT ACGGGTGAA CATGCGTTGATGCTC TERM 1433 1359306 - 1359288 - G 70 -11 -2.58579 | overlap 1359287 GGAACTTGCGATAAC TCACCCGC AAT ACGGGTGA ACATGCGTTGATGCT TERM 1434 1360347 - 1360362 + g 91 -5.4 -5.42862 | opp_overlap 1360347 GCCACAGTGGAGAAG CGGACA AACA TGTCTG TTTTTTTACCGATCT YPO1208 1360997 - 1361524 + | hypothetical protein TERM 1435 1361736 - 1361763 + T 100 -15 -4.0342 | gap 1, opp_overlap 1361736 TGGGCTGACGGAAAA GGGCGCAT-TCCT ATC AGGATATGCGCCC TTATTATTGCTTACG TERM 1436 1361763 - 1361736 - T 100 -15 -4.18018 | gap 1, opp_overlap 1361736 TGGGCTGACGGAAAA GGGCGCAT-TCCT ATC AGGATATGCGCCC TTATTATTGCTTACG tyrP 1362989 - 1361781 - | tyrosine-specific transport protein YPO1210 1363608 - 1364801 + | competence damage-inducible protein A TERM 1437 1364827 - 1364848 + T 95 -13 -3.20207 | opp_overlap 1364821 ATGTTAATATTTAGC CCAGGCGC GGAATA GCGCCTGG TTAATGAGTGCTATT eco 1365368 - 1364859 - | ecotin precursor YPO1212 1365660 - 1365403 - | 2Fe-2S ferredoxin YfaE nrdB 1366794 - 1365664 - | ribonucleotide-diphosphate reductase subunit beta nrdA 1369245 - 1366957 - | ribonucleotide-diphosphate reductase subunit alpha TERM 1438 1367549 - 1367530 - G 71 -10.8 -3.03007 | overlap 1367545 AATACCTTGTGAATA CGTGGTTT CGTT AAACCACG GGCAAGCGCCTTGTT TERM 1439 1368354 - 1368337 - G 70 -8.4 -3.7941 | CATTGGGTAGAACAA CGTGGC CGCGCC GCCACG AACACCGCCCTGTGA TERM 1440 1369717 - 1369696 - R 81 -10.9 -3.27786 | gap 1, opp_overlap 1369690 1369689 1369711, overlap 1369688 GGGAAAAGCCAGGAA GAGCAGGTGC TTA GC-CCTGCTC CCAGTGGGTTCTACG ubiG 1370467 - 1369739 - | 3-demethylubiquinone-9 3-methyltransferase TERM 1441 1371355 - 1371334 - g 73 -5.9 -4.48263 | overlap 1371326 TATAGAAGATGAAAA CATCAGC ATTGAAGG GCTGATG GAGTATATCCCTGGC TERM 1442 1371406 - 1371386 - g 77 -11.9 -3.03771 | opp_overlap 1371384 1371381 CCAGACTTCCCAACA GCAGCCATT ATT AATGGCCGC CGTGGTATTGAAGAG gyrA 1370729 - 1373404 + | DNA gyrase subunit A TERM 1443 1373418 - 1373441 + F 77 -11 -2.81547 | overlap 1373416 AATAATGTTGCTCTG GCAGGTGCGG TTTA TTGCACCTGC TCATTCATCTGCGGC TERM 1444 1373540 - 1373491 - f 81 -5.2 -5.14563 | opp_overlap 1373493, overlap 1373493 CGTGTCATTAAAAAA CAGCCAGC-CAGTGAGCTTAAC GCCCATCA GTTAAGCA-ACTGAGCTGGCTT TTTTATCGGTTATCG TERM 1445 1373493 - 1373538 + F 100 -7.8 -5.3236 | opp_overlap 1373491 1373493 TGTCATTAAAAAACA GCCAGC-CAGTGAGCTTAAC GCCCATCA GTTAAGCA-ACTGAGCTGGC TTTTTTATCGGTTAT TERM 1446 1373538 - 1373493 - f 76 -7.8 -4.20707 | opp_overlap 1373493, overlap 1373491 TGTCATTAAAAAACA GCCAGC-CAGTGAGCTTAAC GCCCATCA GTTAAGCA-ACTGAGCTGGC TTTTTTATCGGTTAT TERM 1447 1373763 - 1373751 - g 100 -3.3 -5.95166 | CTTAACGAAAAAAAA GCCGA TAT TCGTC AGGAATATAACAACA TERM 1448 1373892 - 1373867 - g 81 -6.1 -4.96848 | opp_overlap 1373879 1373882, overlap 1373869 TCGGCTAGATAAAAA CGCCAGTGACA CTGA TGCCACTAGTG GCATGGTTATGAATA TERM 1449 1374307 - 1374319 + G 76 -3.3 -5.09762 | overlap 1374293 GCTTTGAGCAGAGTG TCCGC TTA GAGGA TTTTATTTCTTCCCG rcsC 1373592 - 1376465 + | hybrid sensory kinase in two-component regulatory system with RcsB and YojN TERM 1450 1376509 - 1376483 - T 100 -15.2 -3.83844 | TTCATTAATTAATAA GCCCAGTATTGC AGA GCAAAACTGGGC TTGAGAGTCGAGCGG rcsB 1377186 - 1376533 - | transcriptional regulator RcsB TERM 1451 1377241 - 1377229 - R 73 -2.7 -5.14563 | opp_overlap 1377206 CTGGTGATGAAAAAA TCAAT CTG ACTGA TGCTATTTTCGATCT TERM 1452 1377468 - 1377480 + r 76 -7.7 -4.14193 | ACTGGTTTTTAGTTG CCTCT CAT AGAGG TTTATATCATCTTCT TERM 1453 1378711 - 1378725 + r 81 -4.2 -5.31456 | overlap 1378712 CACCGTGGTGCTGCT CTGCCA TAG TGGCAA TTTTTTGTAGATTCA TERM 1454 1378712 - 1378724 + r 72 -7.7 -3.77789 | overlap 1378711 ACCGTGGTGCTGCTC TGCCA TAG TGGCA ATTTTTTGTAGATTC TERM 1455 1379108 - 1379120 + r 75 -10.5 -2.75183 | overlap 1379105 TGCCGCAATATCTTC GGGGG TAG CCCCC TCATTGAGTGGCACT YPO1221 1381059 - 1379905 - | hypothetical protein TERM 1456 1381779 - 1381765 - H 100 -11.4 -5.626 | GACCGGAGAAAAAAA CCGGTC AGA GACCGG TCGTAACATTAACGA ompC 1382162 - 1383277 + | outer membrane porin protein C TERM 1457 1383305 - 1383330 + F 100 -15.5 -3.78934 | opp_overlap 1383309, overlap 1383309 GTGTGAGTCCTGAGA GAAACGCGGTC ATTC GGCCGCGTTTC TTATTGTGCCCAGAA TERM 1458 1383326 - 1383309 - f 77 -8.3 -4.0371 | opp_overlap 1383309 1383305 GAGTCCTGAGAGAAA CGCGGTC ATTC GGCCGCG TTTCTTATTGTGCCC TERM 1459 1383309 - 1383326 + F 100 -10.5 -4.51812 | opp_overlap 1383309, overlap 1383305 GAGTCCTGAGAGAAA CGCGGTC ATTC GGCCGCG TTTCTTATTGTGCCC TERM 1460 1383348 - 1383366 + F 100 -16 -3.07307 | opp_overlap 1383348 ATTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC TERM 1461 1383366 - 1383348 - f 100 -16 -4.37092 | opp_overlap 1383348 ATTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC tnp 1383479 - 1383937 + | transposase for the IS1541 insertion element TERM 1462 1384015 - 1384039 + T 93 -9.9 -4.32177 | opp_overlap 1384018, overlap 1384017 1384018 ATAGGCGCATATGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTGTGAGCTAC TERM 1463 1384017 - 1384037 + T 100 -12.5 -3.76219 | opp_overlap 1384018, overlap 1384015 1384018 AGGCGCATATGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTGTGAGCT TERM 1464 1384036 - 1384018 - T 100 -16 -4.8048 | opp_overlap 1384018 1384017 1384015 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTGTGAGC TERM 1465 1384018 - 1384036 + T 100 -16 -2.85008 | opp_overlap 1384018, overlap 1384017 1384015 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTGTGAGC TERM 1466 1384572 - 1384548 - T 85 -7.2 -4.90266 | opp_overlap 1384548 GGCACCAATTAAAAA CCTGTTATCT GAATA AGATAACGGG TTTTTGCTTTTCTCT TERM 1467 1384548 - 1384572 + T 100 -9.4 -5.15526 | opp_overlap 1384548 GGCACCAATTAAAAA CCTGTTATCT GAATA AGATAACGGG TTTTTGCTTTTCTCT TERM 1468 1384624 - 1384636 + T 77 -10.5 -3.22858 | overlap 1384623 1384633 GCTTATCCAGCATGT GCCCG GTG CGGGC TATTGCTCTCATTAC ampH 1385893 - 1384727 - | beta-lactamase/D-alanine carboxypeptidase TERM 1469 1384869 - 1384881 + g 80 -4.7 -5.1101 | opp_overlap 1384866 1384869 TAAGTAATAAATCCA CCGCC ACC GCCGG TTTTTTGCATAATGC TERM 1470 1385385 - 1385403 + g 73 -3.1 -5.00616 | gap 1 CGATTATCTTTGGTC GGCCAGGT AAAC ACC-GGTC TTTTTTGCGGGCCGC TERM 1471 1386149 - 1386115 - R 93 -13.6 -2.65388 | opp_overlap 1386121 1386144, overlap 1386121 CAGGGAAGGGAGAAG CAAAAACCGCACTGGC GGG ACCGGTGCGGTTTGTG GTCACGACCAGAAAT TERM 1472 1386121 - 1386143 + r 100 -12.7 -3.96148 | opp_overlap 1386121 1386115 AGGGAGAAGCAAAAA CCGCACTGG CGGGA CCGGTGCGG TTTGTGGTCACGACC TERM 1473 1386143 - 1386121 - R 100 -11.2 -4.93968 | opp_overlap 1386121, overlap 1386115 AGGGAGAAGCAAAAA CCGCACTGGC GGG ACCGGTGCGG TTTGTGGTCACGACC YPO1226 1387664 - 1386168 - | putative transport protein TERM 1474 1386305 - 1386315 + g 79 -6.8 -4.7373 | overlap 1386276 CGGGGATATCTGCCA TGGC ACC GCCA TTTTTAATACGCTCA TERM 1475 1387822 - 1387847 + H 76 -10.7 -2.52464 | opp_overlap 1387822 1387819 1387838 CGACGTAGAAAGCCA TGTATATCAAT AAAA ATTGATATACA TCAATTGAGAGGAAG TERM 1476 1387847 - 1387822 - H 76 -10.7 -2.71325 | opp_overlap 1387822, overlap 1387819 1387838 CGACGTAGAAAGCCA TGTATATCAAT AAAA ATTGATATACA TCAATTGAGAGGAAG TERM 1477 1387851 - 1387838 - H 77 -3.9 -5.16841 | opp_overlap 1387822, overlap 1387822 1387819 GTATATCAATAAAAA TTGAT ATAC ATCAA TTGAGAGGAAGACGC YPO1228 1388071 - 1389099 + | hypothetical protein cheD2 1390960 - 1389173 - | putative methyl-accepting chemotaxis protein pla2 1392317 - 1391382 - | outer membrane protease TERM 1478 1392412 - 1392402 - R 84 -2.6 -5.66989 | opp_overlap 1392402, overlap 1392393 TAAAGATTAAAAAAA TTTT AAA AAAA TTAATTTCTCATTGA dinI 1392731 - 1392489 - | putative stress response protein YPO1233 1393659 - 1392937 - | putative prophage repressor protein YPO1234 1393933 - 1394412 + | probable phage antitermination protein Q TERM 1479 1394500 - 1394488 - f 74 -4.9 -4.8743 | opp_overlap 1394492, overlap 1394480 TCTAAAATAAATAAA GTTAT TTA ATAAC ATTAAGTTAAATTGA YPO1235 1394614 - 1395927 + | hypothetical protein YPO1236 1395924 - 1396535 + | putative aldolase YPO1237 1396615 - 1397430 + | putative transcriptional regulatory protein YPO1238 1397448 - 1398200 + | hypothetical protein TERM 1480 1398229 - 1398255 + F 100 -8.1 -5.30189 | gap 1, overlap 1398234 TGTATAGCTAACTGT GATAGGCCACAC TTCG GTGTGGC-TGTC TTTTTTCATCTTATA TERM 1481 1398234 - 1398251 + F 90 -11.3 -3.7035 | overlap 1398229 AGCTAACTGTGATAG GCCACAC TTCG GTGTGGC TGTCTTTTTTCATCT TERM 1482 1398557 - 1398570 + F 100 -8.1 -6.04953 | AAGACCGATTAACTT CCTGC TGTG GCAGG TTTTTTTGTTTCTAT TERM 1483 1398709 - 1398725 + F 91 -3.5 -5.85737 | opp_overlap 1398705 1398708 1398709 GTAAACAATAAGAAG CCCCAGC ATC GACGGGG TTTTTTTATTGCTGT YPO1239 1398814 - 1399104 + | putative bacteriophage protein YPO1240 1399150 - 1399767 + | putative ATP-binding protein YPO1241 1399772 - 1399966 + | putative bacteriophage protein TERM 1484 1400294 - 1400308 + G 71 -7.8 -4.06633 | CCATCAATACGGCGG CATCGG AGA CCGGTG TTATTTCACTTTATA YPO1242 1399963 - 1401471 + | putative bacteriophage tail sheath protein YPO1243 1401493 - 1401861 + | hypothetical protein TERM 1485 1401946 - 1401928 - g 84 -13.2 -3.38316 | TCACGACGCAAGCAA GACCACCT ATG AGGTGGTC GAACTCAGCGAACCT YPO1244 1401863 - 1402162 + | hypothetical protein YPO1245 1402283 - 1403776 + | putative bacteriophage coat protein TERM 1486 1403907 - 1403881 - f 84 -10.1 -3.82218 | gap 1, opp_overlap 1403890, overlap 1403882 1403897 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 1487 1403908 - 1403882 - f 72 -10.1 -2.88849 | gap 1, opp_overlap 1403890, overlap 1403881 1403897 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT TERM 1488 1403988 - 1404001 + F 100 -9.5 -5.4387 | GTCAATAACCTCGAA CCCGC TCCA GCGGG TTTTTTACTTTCTGT YPO1246 1404043 - 1405449 + | putative bacteriophage protein YPO1247 1405446 - 1406501 + | putative bacteriophage tail protein TERM 1489 1406582 - 1406593 + G 71 -7.2 -4.07568 | overlap 1406579 GCTGCTGGGGATCGG GCGG GTGA CCGC TTTTGACGACAGCAA YPO1248 1406517 - 1407113 + | putative bacteriophage (baseplate assembly) protein YPO1249 1407110 - 1407565 + | putative bacteriophage protein GP46 YPO1250 1407569 - 1408705 + | putative bacteriophage protein YPO1250a 1408702 - 1408962 + | putative bacteriophage protein YPO1251 1408959 - 1409306 + | putative bacteriophage protein TERM 1490 1409475 - 1409447 - g 70 -9.5 -3.25942 | opp_overlap 1409434 1409474, overlap 1409433 1409458 ACGCGCCGACAGTAA CGGCGAATTTACC GAC GGCAACGTCGCCG GTGGCGTTCCACCCA stf 1409403 - 1410182 + | putative bacteriophage tail fiber protein TERM 1491 1410299 - 1410275 - f 75 -7.2 -4.33621 | gap 1, opp_overlap 1410279, overlap 1410277 1410279 CAGTGAATTAATAAA TATACCGGGCA ATTA CGCCCGGT-TA GCTATCTACAAAGAA TERM 1492 1410298 - 1410277 - f 72 -7.9 -3.7642 | opp_overlap 1410279, overlap 1410275 1410279 GTGAATTAATAAATA TACCGGGCA ATTA CGCCCGGTT AGCTATCTACAAAGA TERM 1493 1410279 - 1410296 + F 74 -9.8 -3.15999 | opp_overlap 1410279 1410277 1410275 GAATTAATAAATATA CCGGGC AATTAC GCCCGG TTAGCTATCTACAAA TERM 1494 1410296 - 1410279 - f 80 -10.5 -3.45532 | opp_overlap 1410279, overlap 1410277 1410275 GAATTAATAAATATA CCGGGCA ATTA CGCCCGG TTAGCTATCTACAAA YPO1253 1410480 - 1411220 + | putative LacI-family regulatory protein TERM 1495 1412870 - 1412857 - g 74 -4.5 -4.84359 | TTATGTCGATAAAAA CGATG ATGG CACCG GTACAATGGCGCGTT bglA 1411511 - 1412947 + | 6-phospho-beta-glucosidase TERM 1496 1412993 - 1413014 + T 100 -12.3 -4.8143 | opp_overlap 1412992 1412991 TTGAATTCAAGAAGG CCGTTCACC CTTT GGTGAGCGG TTTTTACCTTGTTAC YPO1255 1413435 - 1413073 - | hypothetical protein TERM 1497 1413197 - 1413182 - G 71 -6.2 -4.34402 | opp_overlap 1413181 TCTTTCATATCAAAA GGATAA CCTA TTATCC CAGTTTTTAATTTAA YPO1257 1414623 - 1414135 - | hypothetical protein YPO1258 1415784 - 1414636 - | hypothetical protein TERM 1498 1416039 - 1416002 - R 87 -8.6 -4.5464 | overlap 1416003 TATATATAAGCAAAA GTATGTTGGTTCAGAT TGAACT AACTGAACCAACATAA AAACCTCGCATGTGA TERM 1499 1416038 - 1416003 - R 89 -12.1 -3.317 | overlap 1416002 ATATATAAGCAAAAG TATGTTGGTTCAGAT TGAACT AACTGAACCAACATA AAAACCTCGCATGTG YPO1259 1416524 - 1416141 - | putative bacteriophage protein (partial) TERM 1500 1416566 - 1416533 - R 100 -13.3 -3.91144 | opp_overlap 1416531 1416541, overlap 1416536 1416541 GCCACACTCCACAAA CGACAAAACCAACCC GAAT GGATTGGTTTTGTTG AGGTATTTGGTCGGC TERM 1501 1416563 - 1416536 - R 100 -13.6 -3.02186 | opp_overlap 1416531 1416541, overlap 1416533 1416541 ACACTCCACAAACGA CAAAACCAACCC GAAT GGATTGGTTTTG TTGAGGTATTTGGTC TERM 1502 1416558 - 1416541 - R 86 -7.7 -4.64846 | opp_overlap 1416531 1416541, overlap 1416536 1416533 CCACAAACGACAAAA CCAACCC GAAT GGATTGG TTTTGTTGAGGTATT TERM 1503 1416541 - 1416558 + r 73 -5.5 -4.6759 | opp_overlap 1416541 1416536 1416533, overlap 1416531 CCACAAACGACAAAA CCAACCC GAAT GGATTGG TTTTGTTGAGGTATT YPO1260 1418551 - 1416755 - | hypothetical protein TERM 1504 1417655 - 1417641 - G 71 -5.6 -4.4572 | AACAGGCCAAATAAA CCGGTA TCT TGCCGG TTACCCGAACTGTAA YPO1261 1418806 - 1418579 - | hypothetical protein YPO1262 1418984 - 1419988 + | nucleoid-associated protein NdpA TERM 1505 1420014 - 1420043 + F 100 -18.1 -3.28712 | opp_overlap 1420014 1420021, overlap 1420021 TGCGTATTTAGCCAA TAAAAAACGCCGC ATCA GCGGCGTTTTTTA TTGTGCCCAGAAAAC TERM 1506 1420043 - 1420014 - f 100 -18.1 -3.07816 | opp_overlap 1420014 1420021, overlap 1420021 TGCGTATTTAGCCAA TAAAAAACGCCGC ATCA GCGGCGTTTTTTA TTGTGCCCAGAAAAC TERM 1507 1420021 - 1420036 + F 100 -11.8 -5.55769 | opp_overlap 1420021 1420014, overlap 1420014 TTAGCCAATAAAAAA CGCCGC ATCA GCGGCG TTTTTTATTGTGCCC TERM 1508 1420036 - 1420021 - f 100 -11.8 -5.4833 | opp_overlap 1420014 1420021, overlap 1420014 TTAGCCAATAAAAAA CGCCGC ATCA GCGGCG TTTTTTATTGTGCCC TERM 1509 1420076 - 1420058 - f 100 -16 -4.37092 | opp_overlap 1420058 ATTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC TERM 1510 1420058 - 1420076 + F 100 -16 -3.07307 | opp_overlap 1420058 ATTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC tnp 1420189 - 1420647 + | transposase for the IS1541 insertion element TERM 1511 1420725 - 1420749 + T 100 -9.9 -4.42806 | opp_overlap 1420728, overlap 1420727 1420728 ATAGGCGCATATGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTTCGGCGTCC TERM 1512 1420727 - 1420747 + T 100 -12.5 -3.81958 | opp_overlap 1420728, overlap 1420725 1420728 AGGCGCATATGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTTCGGCGT TERM 1513 1420746 - 1420728 - T 100 -16 -4.8048 | opp_overlap 1420727 1420725 1420728 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTCGGCG TERM 1514 1420728 - 1420746 + T 100 -16 -2.88452 | opp_overlap 1420728, overlap 1420727 1420725 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTCGGCG rplY 1421070 - 1420786 - | 50S ribosomal protein L25 YPO1265 1422989 - 1421232 - | putative DEAD box helicase family protein TERM 1515 1422679 - 1422660 - G 73 -5.8 -4.59027 | gap 1, overlap 1422662 AATCAGCAGAGAAAA TG-CGCTAT CAA ATAGCGGCA GATTACGGGCCACCG TERM 1516 1422947 - 1422937 - G 71 -6.8 -4.17048 | TGGCGTCGAAAATAA GCCA CCG TGGC ATCGACCGCTTCTCG rsuA 1423503 - 1424210 + | 16S rRNA pseudouridylate synthase A bcr 1424329 - 1425528 + | bicyclomycin/multidrug efflux system TERM 1517 1426275 - 1426260 - f 95 -7.6 -5.00412 | AAATATAACGAAAAA TGGGAT CTGA ATCCCA AATCTACAGCTTCTG YPO1269 1426495 - 1426839 + | hypothetical protein TERM 1518 1426855 - 1426876 + T 82 -5.8 -4.9792 | TACTTTTTAGCTGTT TGTCCGTG TGCTAT CGCGGGCA TTTTTGTCTAGGCTA YPO1270 1428492 - 1426900 - | putative ABC transporter ATP-binding subunit TERM 1519 1427559 - 1427579 + g 73 -6.1 -4.58663 | opp_overlap 1427542 CCAGACTTTCGCCGG GCTTCAGGT CAA AACTGAGGC TTTTTAGCGCATAGT YPO1271 1429522 - 1428494 - | putative ABC transporter integral membrane subunit YPO1272 1430622 - 1429522 - | putative ABC transporter integral membrane subunit TERM 1520 1430126 - 1430145 + g 100 -10.7 -5.60993 | opp_overlap 1430125 CTCCAGGTATCGAAG GCGGTGC CATTGC GCACCGC TTTTTTTATCCCCAG YPO1273 1432440 - 1430632 - | putative substrate-binding transport protein YPO1274 1433895 - 1432522 - | hypothetical protein TERM 1521 1434643 - 1434627 - R 100 -8.7 -5.4833 | opp_overlap 1434627 TGAGCCAATAAAAAA CGCTGTC ATA AACAGCG TTTCAACGTTTGGTT TERM 1522 1434627 - 1434643 + r 70 -8 -3.65084 | opp_overlap 1434627 TGAGCCAATAAAAAA CGCTGT CATAA ACAGCG TTTCAACGTTTGGTT spr 1435274 - 1434690 - | putative outer membrane lipoprotein TERM 1523 1434886 - 1434896 + g 71 -6.8 -4.1552 | opp_overlap 1434886 CCTGGACGTAATTTA GTCC GCT GGAC TTTCTTGCCGAGATC TERM 1524 1435104 - 1435156 + g 75 -9.1 -3.82865 | opp_overlap 1435102 CGCTTCGAATTCATC CTGAGAGGCTTGCAGTAAAAGCCCA TCT TTGTCATTAACTGCACGCATCTCAG TTTGCGTATTATTTA YPO1276 1436417 - 1435716 - | hypothetical protein YPO1277 1437459 - 1436476 - | putative cobalamin synthesis protein TERM 1525 1436928 - 1436947 + g 70 -4.9 -4.68705 | overlap 1436938 1436941 ATTCGCTATGATACA GCGGCCG CGATAA TGGCTGC TTTTGTTGCCATTGT YPO1278 1437775 - 1438101 + | hypothetical protein TERM 1526 1438124 - 1438152 + F 100 -15.5 -3.89524 | CAACATGTTTGGGCA TCACGGTTTATCG ACG TGATAAACCGTGA TTTATCACCTGAAGT YPO1279 1438210 - 1439010 + | putative transcriptional regulatory protein TERM 1527 1439145 - 1439111 - T 89 -11.6 -3.4314 | opp_overlap 1439109 1439112, overlap 1439109 1439112 TAAACGCCAACAATA CCGATGAGCTGAAT AGCCTTG ATTCAGCTCATCGT CGTGTGTCTTAAGCC TERM 1528 1439112 - 1439144 + T 100 -15.1 -2.75975 | opp_overlap 1439111 1439109 1439112, overlap 1439109 AAACGCCAACAATAC CGATGAGCTGAAT AGCCTTG ATTCAGCTCATCG TCGTGTGTCTTAAGC TERM 1529 1439144 - 1439112 - T 100 -15.1 -2.65161 | opp_overlap 1439112 1439109, overlap 1439111 1439109 AAACGCCAACAATAC CGATGAGCTGAAT AGCCTTG ATTCAGCTCATCG TCGTGTGTCTTAAGC YPO1280 1440626 - 1439154 - | putative D-mannonate oxidoreductase TERM 1530 1439876 - 1439859 - G 71 -6.9 -4.2123 | GACCCACTGAATAAA GGGTTCG CAGG CGATCCC ACAAGAGTCTGCGAC TERM 1531 1440873 - 1440861 - H 75 -3.4 -5.23292 | opp_overlap 1440861 TGACAGAAAATAAAA TTGG TAAGT CCAA TATTGATAATATTCG TERM 1532 1441155 - 1441173 + H 71 -3.2 -5.00467 | opp_overlap 1441150, overlap 1441171 CAGAAAAAGGCGGCT TTAACC GTTAGCG GGTTAA TTTTATTATTGTTGC TERM 1533 1442151 - 1442139 - g 85 -7.7 -4.83759 | AAGGAAATCCAAAAA CCTTC CAT GAAGG GGGGCATTTGCAAGG uxuA 1441211 - 1442404 + | mannonate dehydratase TERM 1534 1442460 - 1442430 - T 100 -14 -3.69482 | opp_overlap 1442439, overlap 1442431 TCAGTGAAGAGATAA CCGTTAAGGGCCGG TTT CCGGCTCTTAACGT AGAGAGACCCAATAG TERM 1535 1442459 - 1442431 - T 100 -17.5 -2.81207 | opp_overlap 1442439, overlap 1442430 CAGTGAAGAGATAAC CGTTAAGGGCCGG TTT CCGGCTCTTAACG TAGAGAGACCCAATA TERM 1536 1442439 - 1442451 + T 76 -10.5 -3.05844 | opp_overlap 1442431 1442430 AGATAACCGTTAAGG GCCGG TTT CCGGC TCTTAACGTAGAGAG YPO1284 1443116 - 1442544 - | elongation factor P mtr 1444464 - 1443220 - | putative tryptophan-specific transport protein TERM 1537 1444478 - 1444497 + H 76 -7.8 -4.22375 | opp_overlap 1444482 ATCTATTGCTCCTGA GATACCCG GCTG CGGGTAAC TTCTTTATATTAAGT YPO1286 1444839 - 1445093 + | hypothetical protein YPO1287 1445977 - 1445162 - | putative short chain oxidoreductase TERM 1538 1445822 - 1445800 - G 70 -11.3 -2.62613 | overlap 1445799 1445797 GTTCACGTGAAATAT CGGTGCAGA TCACT TCCGCACCG GTTGCCGCCAGCCCT TERM 1539 1446028 - 1445996 - R 76 -11.1 -2.52464 | opp_overlap 1446023 CTTCTCCTTAAGTCA GTGGGCAGCGCAGTG GCT CACCGCGCAGTCCCC GTAGGGCCTCTTCAG YPO1288 1446953 - 1445988 - | putative D-isomer specific 2-hydroxyacid dehydrogenase family protein YPO1289 1448092 - 1446950 - | hypothetical protein TERM 1540 1448636 - 1448646 + G 79 -8.2 -4.2828 | overlap 1448635 GAGGCGGTTGCTGCG GCGC GTC GCGC TTTTCCTGCCTGGGC YPO1290 1448444 - 1449940 + | putative aldehyde dehydrogenase TERM 1541 1450469 - 1450484 + G 71 -6.8 -4.24204 | gap 1, overlap 1450471 ACTGAAGTTTCGGAT GCCTCGG GGA CCG-GGC TTTTCGATGTACGTG YPO1291 1449944 - 1451497 + | putative carbohydrate kinase rpiA 1451517 - 1452227 + | putative ribose 5-phosphate isomerase YPO1293 1452359 - 1453447 + | putative periplasmic carbohydrate-binding transport protein TERM 1542 1453711 - 1453690 - g 70 -2.9 -4.8083 | gap 1, opp_overlap 1453694, overlap 1453691 1453693 1453694 GAATATCAGCAAAAA CTATGGCCCG GTG CAGGCCTT-G TGCGGCGTGACGACC TERM 1543 1454623 - 1454610 - g 74 -8.1 -4.07687 | opp_overlap 1454610 AGGCTCTGCCGAAAA GGCCA CGCA TGGCC TTCAATATTGGCATT YPO1294 1453556 - 1455130 + | putative ABC transport ATP-binding subunit TERM 1544 1455877 - 1455891 + G 78 -3.5 -5.08601 | gap 1 ATTTCAGGGTTCCTT GCC-GC ACTT GCTGGC TTTTTGTTGGCATCG YPO1295 1455166 - 1456164 + | putative ABC transport integral membrane subunit YPO1296 1456798 - 1456277 - | putative Mut family protein fruB 1456994 - 1458127 + | bifunctional fructose-specific PTS IIA/HPr protein TERM 1545 1458241 - 1458221 - g 79 -6.8 -4.59853 | TCAATCTGGTAAAAA CCGCCG GTCTGCATG CGGCGG GTAAAGGGATCAACG fruK 1458124 - 1459062 + | 1-phosphofructokinase fruA 1459077 - 1460777 + | fructose-specific PTS system IIBC component TERM 1546 1460836 - 1460861 + F 100 -13.4 -5.30686 | opp_overlap 1460836 GTCAGCAGTCTGAAA TGCCAGTCAG TTAATT CTGACTGGCA TTTTTTATGGGTGTT TERM 1547 1460861 - 1460836 - f 100 -13.4 -3.58343 | opp_overlap 1460836 GTCAGCAGTCTGAAA TGCCAGTCAG TTAATT CTGACTGGCA TTTTTTATGGGTGTT TERM 1548 1460963 - 1460940 - f 71 -8.4 -3.53224 | opp_overlap 1460940 1460955, overlap 1460955 TATTTTTTTGTTAAA TTATTAAGAT AATA ATCTTAATAA GACTTAATCTTGTGC TERM 1549 1461533 - 1461554 + G 82 -6.7 -4.77036 | CTTTTTTATCGCTAT TATGATGGT CATC ATCATCATA TTTTTCATGGTAGGA psaE 1461102 - 1461746 + | putative regulatory protein TERM 1550 1462133 - 1462105 - g 80 -4.5 -5.08831 | opp_overlap 1462104, overlap 1462093 1462107 TAATAAAAAAAATAA CGTTGTCACCTTT TTT AATGGTGACAGAG GCTTTATTGATGTCA psaF 1461743 - 1462231 + | hypothetical protein psaA 1462776 - 1463252 + | pH 6 antigen precursor (antigen 4) (adhesin) TERM 1551 1463261 - 1463302 + F 89 -6.7 -5.31855 | opp_overlap 1463264 1463265 1463267, overlap 1463264 1463265 ATTTTAAATAACGAG TAATCATAGAACATGATGG CTTG CTGTCATGTTCTATGTATG TTTTTGTTATTGATG TERM 1552 1463264 - 1463300 + F 86 -9 -4.27297 | gap 1, opp_overlap 1463264 1463265 1463267, overlap 1463261 1463265 TTAAATAACGAGTAA T-CATAGAACATGATGG CTTG CTGTCATGTTCTATGTA TGTTTTTGTTATTGA TERM 1553 1463265 - 1463298 + F 100 -14.1 -3.70836 | opp_overlap 1463264 1463265 1463267, overlap 1463264 1463261 TAAATAACGAGTAAT CATAGAACATGATGG CTTG CTGTCATGTTCTATG TATGTTTTTGTTATT TERM 1554 1463298 - 1463265 - f 71 -9.7 -2.60492 | opp_overlap 1463265 1463264 1463261, overlap 1463264 1463267 TAAATAACGAGTAAT CATAGAACATGATGG CTTG CTGTCATGTTCTATG TATGTTTTTGTTATT TERM 1555 1463318 - 1463352 + F 95 -14 -2.84192 | opp_overlap 1463342 TTTTTGTTATTGATG TTTTATTGTGAGTTTT TTT AAAATTCACAATAAAA TATCATGATAATGTG TERM 1556 1464080 - 1464062 - g 88 -3.8 -5.68438 | GGATGAAATAAAAAA TGGCAG CTATGTT CCGCCA TTCTCTTCTAGGGAT TERM 1557 1464082 - 1464094 + G 72 -4.1 -4.90079 | GCTATGTTCCGCCAT TCTCT TCT AGGGA TTTTATTATTCCGGT psaB 1463379 - 1464200 + | chaperone protein PsaB precursor TERM 1558 1464972 - 1464984 + G 73 -3.3 -5.00884 | overlap 1464973 CCTTAGGGGAGAGTT ACACC CCA GGTGA TTTTTTCGACAGCAT psaC 1464242 - 1466755 + | outer membrane usher protein PsaC precursor TERM 1559 1466808 - 1466832 + T 100 -11.4 -4.4715 | overlap 1466810 TCCCGTCAGGTTCAA TTCCCGCCAG GTTTA CTGGCGGGCA TTTTCTACGTTACAA TERM 1560 1466810 - 1466830 + T 93 -14 -2.56203 | overlap 1466808 CCGTCAGGTTCAATT CCCGCCAG GTTTA CTGGCGGG CATTTTCTACGTTAC nfo 1467699 - 1466842 - | endonuclease IV TERM 1561 1467175 - 1467185 + g 86 -8.2 -4.67608 | opp_overlap 1467172 1467174 GGTATCAATACAGAC GCCG ACG CGGC TTTTATCTTCCACTC TERM 1562 1467799 - 1467776 - R 100 -13.2 -3.75332 | overlap 1467779 AGCGGTGAAGGGAAA TAAGGGCCGC GGAT ACGGCCCTTA AACGGTTTGTTTTAG TERM 1563 1467796 - 1467779 - R 89 -10.5 -4.0098 | overlap 1467776 GGTGAAGGGAAATAA GGGCCGC GGAT ACGGCCC TTAAACGGTTTGTTT YPO1307 1468951 - 1467863 - | hypothetical protein TERM 1564 1470335 - 1470368 + G 84 -13.3 -3.44334 | gap 1, opp_overlap 1470344, overlap 1470320 TCGCGGCGAGTGATT GCT-GATCAACTCGCC AGC GGTGAGTTGGTCGAGC TTAATATTCCTTTAC YPO1308 1469609 - 1470481 + | putative DNA-binding transcriptional regulator TERM 1565 1471654 - 1471670 + G 73 -8.7 -3.79419 | opp_overlap 1471653 1471654 GCGGCAGTGATGAAT GCGGTTA TTT TGACCGC TGTTTTATCGGCGGG lysP 1470739 - 1472250 + | lysine transporter TERM 1566 1472281 - 1472300 + F 100 -12.2 -4.01902 | opp_overlap 1472281 AACGTGCGGATGAAA GGGCGATA ACGC TATCGCCC TTCTTTAGTGCCTAT TERM 1567 1472300 - 1472281 - f 93 -12.2 -3.73072 | opp_overlap 1472281 AACGTGCGGATGAAA GGGCGATA ACGC TATCGCCC TTCTTTAGTGCCTAT TERM 1568 1472330 - 1472369 + F 100 -17.4 -3.51924 | gap 1, opp_overlap 1472322 1472333 1472341 TAAATTAGCGGTAAC TGACGCCAATACCAGTACG AAA TGTGCTGGTATTGGCG-CA TTCTATCCGTGAACA TERM 1569 1472367 - 1472333 - f 100 -17.3 -2.53382 | opp_overlap 1472330, overlap 1472322 1472341 ATTAGCGGTAACTGA CGCCAATACCAGTAC GAAAT GTGCTGGTATTGGCG CATTCTATCCGTGAA TERM 1570 1472472 - 1472486 + F 70 -5.8 -4.26832 | overlap 1472467 TTATGGCAATCTTAT TGATAA GTA TTATCA TTTGCTTTATTGTTA YPO1310 1472536 - 1473681 + | putative periplasmic substrate-binding transport protein TERM 1571 1474775 - 1474789 + G 78 -6.4 -4.8622 | overlap 1474776 CGCACGCATGATTTT TGGTGA AGA TCACCG TTTTTACTTACCAGC YPO1311 1473876 - 1474958 + | putative FecCD-family membrane transport protein YPO1312 1474955 - 1475743 + | putative siderophore ABC transporter, ATP-binding subunit TERM 1572 1476869 - 1476886 + G 71 -5.7 -4.3534 | opp_overlap 1476857, overlap 1476857 TAATTATGCGGTTAC TCATAAT GGTT ATTATGA TTTTGGTAATTCAAC TERM 1573 1477345 - 1477333 - g 71 -10.5 -3.04398 | opp_overlap 1477332 1477332, overlap 1477332 CTGGTGGGGGAAAAG GCGGG CTT CCCGC ACTTATTCTGGGTAA YPO1313 1476003 - 1478000 + | putative outer membrane receptor TERM 1574 1478175 - 1478225 + T 85 -9.3 -4.07885 | gap 1, overlap 1478176 TAGCTGAGCGCACTT ACCCGAATCACTTACTGGTTGTTG ACTT TAA-AATAAGTAAGTGATTCGGGA TTTTGACCAGCAATG TERM 1575 1478176 - 1478224 + T 95 -12.8 -3.04517 | gap 1, overlap 1478175 AGCTGAGCGCACTTA CCCGAATCACTTACTGGTTGTTG ACTT TAA-AATAAGTAAGTGATTCGGG ATTTTGACCAGCAAT YPO1314 1478890 - 1478270 - | putative glutathione S-transferase-family protein YPO1315 1479694 - 1479044 - | putative hydrolase TERM 1576 1479320 - 1479308 - G 75 -10.5 -3.37622 | AACACCGATTGATAA CGCCG TAT CGGCG GCAAAGTGTTTCGCG TERM 1577 1480603 - 1480572 - g 71 -7.2 -3.99324 | CCCCATTACCACAAA TCGCAGGCGCACCC AGTT GGACACGGCTGCAA GGCCCGAACCAATGG TERM 1578 1481070 - 1481095 + G 75 -10.5 -3.494 | TTTTAGGTGCGCGTT TGGATGCGGTG GTGC CACTGTATCCA TTATCTGCCGCATTG YPO1316 1480181 - 1481248 + | putative iron/ascorbate oxidoreductase family protein YPO1317 1481476 - 1482300 + | hypothetical protein TERM 1579 1483200 - 1483225 + G 70 -9.1 -3.54307 | gap 1 CGCTTGCACGTTGAT TTCAAC-CGTCC AGA GGGCGGGTTGAA TTTAGCCGAAGTGTT YPO1318 1482297 - 1483283 + | putative ABC transport ATP-binding subunit TERM 1580 1483482 - 1483494 + G 71 -5.5 -4.55625 | CACTGGTCAATGTGG GGCGT TCA ATGCC TTTTGTGGTGTTACT YPO1319 1483280 - 1483951 + | putative ABC transport integral membrane subunit TERM 1581 1485029 - 1485055 + G 84 -10.9 -4.08887 | opp_overlap 1485024 GGGGTATAATTTGGT CGCATCGGC GACAGATGG GCCGATGCG TTTGATTTCCGTGGT dacC 1484193 - 1485491 + | D-alanyl-D-alanine carboxypeptidase TERM 1582 1485661 - 1485606 - T 100 -14.3 -4.60255 | opp_overlap 1485613 1485624, overlap 1485613 1485624 ATAAGTCCTTAAAAA TCCATAACATCCTAAAAAGCGCGAT GTGACT ATCGCGCTTTTTAGGATGTTTCTCA GGGGATAAGCTACAG TERM 1583 1485654 - 1485613 - T 100 -23.4 -3.5616 | opp_overlap 1485613 1485624, overlap 1485606 1485624 CTTAAAAATCCATAA CATCCTAAAAAGCGCGAT GTGACT ATCGCGCTTTTTAGGATG TTTCTCAGGGGATAA TERM 1584 1485613 - 1485654 + T 100 -24.1 -3.86346 | opp_overlap 1485613 1485606 1485624, overlap 1485624 CTTAAAAATCCATAA CATCCTAAAAAGCGCGATG TGAC TATCGCGCTTTTTAGGATG TTTCTCAGGGGATAA TERM 1585 1485643 - 1485624 - T 100 -9.3 -4.67556 | opp_overlap 1485613 1485624, overlap 1485613 1485606 ATAACATCCTAAAAA GCGCGAT GTGACT ATCGCGC TTTTTAGGATGTTTC TERM 1586 1485624 - 1485643 + T 100 -10 -4.6856 | opp_overlap 1485624 1485613 1485606, overlap 1485613 ATAACATCCTAAAAA GCGCGATG TGAC TATCGCGC TTTTTAGGATGTTTC TERM 1587 1485894 - 1485862 - T 90 -5.6 -5.54403 | gap 1, overlap 1485865 AAAAAAGAAGAAAAA TAACAGGCTGGCC GTGGAAGT GGCCAGCCTGG-A GCGGTTAATCAAACG TERM 1588 1485892 - 1485865 - T 100 -14.2 -4.74161 | overlap 1485862 AAAGAAGAAAAATAA CAGGCTGGCC GTGGAAGT GGCCAGCCTG GAGCGGTTAATCAAA YPO1321 1487232 - 1485931 - | serine transporter TERM 1589 1486115 - 1486129 + g 74 -10 -3.59979 | AATGTTTCGATCATC CCCAAG ATA CTTGGG TTTAAGGTCGCGACA TERM 1590 1486462 - 1486441 - G 78 -9.5 -3.82486 | opp_overlap 1486443 ACTGAAGACGAAGAA CATGACGGT GATA ACCATCATG ATGTGGGCAAAGCTC TERM 1591 1488172 - 1488159 - R 70 -3.9 -4.83615 | opp_overlap 1488159 GATTCTGTATAAAAA TAATC TATG GATTA TTTGCCAACATAGCG deoR 1489096 - 1488332 - | DNA-binding transcriptional repressor DeoR TERM 1592 1489185 - 1489158 - R 100 -11.4 -4.36554 | CAGTACGATAATAAA TAAGCCCGGT AATTGTGG ACCGGGCTTA GACTACTGACAAAAT deoC 1489997 - 1489326 - | deoxyribose-phosphate aldolase TERM 1593 1490229 - 1490205 - R 100 -15.1 -2.91264 | GGGCGCATGGAGAGA TTGCCGGTCAG AGA CTAACCGGCAA GTGTGAAGCGAATAC YPO1324 1490851 - 1490255 - | undecaprenyl pyrophosphate phosphatase YPO1325 1491675 - 1490860 - | hypothetical protein TERM 1594 1490978 - 1490966 - G 90 -9.1 -4.73613 | opp_overlap 1490966 TTATGAGTAAGAAAA TGCGC CCC GCGCA TTATTTGACCGAAAC TERM 1595 1490966 - 1490978 + g 75 -9.1 -3.90744 | opp_overlap 1490966 TTATGAGTAAGAAAA TGCGC CCC GCGCA TTATTTGACCGAAAC YPO1326 1493696 - 1492008 - | hypothetical protein TERM 1596 1493191 - 1493174 - G 74 -7.7 -4.18197 | AGCGCGCACCTAAAA TCAGGCT AACC AGCCCGA TAAGATAAGTCAGGG TERM 1597 1494049 - 1494065 + r 95 -12.3 -3.33492 | opp_overlap 1494049 CCAGCAATAAAGAAA GGGTGTC TTG GACACCC TTATCGGATAAATGC TERM 1598 1494065 - 1494049 - R 100 -12.3 -4.70887 | opp_overlap 1494049 CCAGCAATAAAGAAA GGGTGTC TTG GACACCC TTATCGGATAAATGC grxA 1494369 - 1494106 - | glutaredoxin 1 TERM 1599 1494205 - 1494218 + g 76 -4.5 -5.03314 | overlap 1494195 1494194 TGGCACGGTTTCAAC CGGTT TACC GACCG TTTTTTCCAGATCAG YPO1328 1494832 - 1495146 + | hypothetical protein TERM 1600 1495195 - 1495169 - g 72 -9.5 -3.41013 | TAAGCACATTGAGAA TATCTAAGCCG AGGAA CGGCCCAGATA TCAAATTAGTCGGGA YPO1329 1495162 - 1495281 + | hypothetical protein YPO1330 1495288 - 1495773 + | hypothetical protein TERM 1601 1495832 - 1495868 + F 71 -5 -4.74013 | gap 1, opp_overlap 1495834 1495836 1495838, overlap 1495835 1495836 GAACGTGTCCGAATA AAGACAGTGTGCCGCAG ATAT CAGCGGCACGCGG-CTA TTTTCTCTATTTACG TERM 1602 1495835 - 1495866 + F 74 -7.8 -3.97364 | opp_overlap 1495834 1495836 1495838, overlap 1495832 1495836 CGTGTCCGAATAAAG ACAGTGTGCCGCAG ATAT CAGCGGCACGCGGC TATTTTCTCTATTTA TERM 1603 1495865 - 1495836 - f 75 -9.1 -3.6761 | opp_overlap 1495835 1495832 1495836, overlap 1495834 1495838 GTGTCCGAATAAAGA CAGTGTGCCGCAG ATAT CAGCGGCACGCGG CTATTTTCTCTATTT TERM 1604 1495836 - 1495865 + F 83 -11.3 -2.96792 | opp_overlap 1495836 1495834 1495838, overlap 1495835 1495832 GTGTCCGAATAAAGA CAGTGTGCCGCAG ATAT CAGCGGCACGCGG CTATTTTCTCTATTT TERM 1605 1495863 - 1495838 - f 80 -10.3 -3.41738 | opp_overlap 1495836 1495835 1495832, overlap 1495836 1495834 GTCCGAATAAAGACA GTGTGCCGCAG ATAT CAGCGGCACGC GGCTATTTTCTCTAT TERM 1606 1496633 - 1496620 - g 70 -2.3 -4.98857 | opp_overlap 1496621, overlap 1496621 ACCGAATGAGAAAAA TCTCG ACCC CGAGT TACTGGCGCTGGTCA TERM 1607 1496912 - 1496922 + G 71 -6.8 -4.25458 | opp_overlap 1496907 GCCGATTACACGGGC TCCG CGA CGGA TTTATTGCTGAAGTT potF 1496291 - 1497400 + | putrescine transporter subunit: periplasmic-binding component of ABC superfamily potG 1497571 - 1498704 + | putrescine transporter ATP-binding subunit potH 1498729 - 1499694 + | putrescine transporter subunit: membrane component of ABC superfamily potI 1499691 - 1500536 + | putrescine transporter subunit: membrane component of ABC superfamily TERM 1608 1500570 - 1500593 + F 100 -15.4 -3.30124 | overlap 1500573 GTCTTTCGTCTCCTT TAACGCCGCT TTAG AGCGGCGTTA TTGTGAGAGATAACA TERM 1609 1500573 - 1500590 + F 100 -12.7 -3.7941 | overlap 1500570 TTTCGTCTCCTTTAA CGCCGCT TTAG AGCGGCG TTATTGTGAGAGATA YPO1335 1500661 - 1501125 + | hypothetical protein TERM 1610 1501228 - 1501243 + G 82 -10.4 -3.83226 | opp_overlap 1501228 ATTGCGCACAGTATA CGGCAG GTCG CTGCCG TTCTTGTCAGTGGTT TERM 1611 1501794 - 1501782 - g 73 -9.1 -3.67597 | opp_overlap 1501788, overlap 1501785 CCGCTGACCGAACAA CAGGC CCT GCCTG AGCGGTTTAATCAGG rumB 1501209 - 1502339 + | 23S rRNA methyluridine methyltransferase TERM 1612 1502805 - 1502823 + F 100 -13.2 -4.01078 | CCAGGGGGTAATCTG CTCTCCTG ATT CAGGAGAG TTTATGGTCACTTTT y1093 1502827 - 1503849 + | transposase for insertion sequence IS100 TERM 1613 1503930 - 1503916 - g 77 -11.4 -3.3506 | overlap 1503907 TGGAAAGCCTTATAA GCGCAG CGC CTGCGC TGTCACAACAGGCAG YPO1339 1503846 - 1504628 + | transposase/IS protein TERM 1614 1505606 - 1505622 + G 71 -6.7 -4.21974 | opp_overlap 1505613, overlap 1505613 1505614 CTGGTATTAGCATGG TGATAAT TTC ATTATCA TTTGTTAAATGATAA YPO1341 1505404 - 1505634 + | hypothetical protein YPO1342 1505975 - 1506901 + | putative SPFH domain protein TERM 1615 1506930 - 1506965 + F 100 -11.8 -5.35459 | opp_overlap 1506926 ATCAATAAATCTGAA GCCCACTTCCCCATGG AGAT TCGTGGTGTAGTGGGC TTTTTTATCATCTGT TERM 1616 1508048 - 1508069 + G 72 -3.7 -4.82901 | CGCGCAGAGTATGTG TTATCTCAG AAAC CCGAGGTAA TTTTTCTGGCGGGCG TERM 1617 1508250 - 1508261 + G 70 -3 -4.89393 | GCGGCGTCCGCACGT TGTA CGAC TACA TTTTTGTGCAGTTTG YPO1343 1507268 - 1508404 + | putative periplasmic binding protein YPO1344 1508555 - 1509460 + | FecCD transport family protein TERM 1618 1510179 - 1510169 - g 70 -8.2 -3.70919 | TCGAAAGTGGAACAA GCCC TTT GGGC TATCGCTACTTATTG YPO1345 1509457 - 1510242 + | putative transport ATP-binding protein TERM 1619 1510984 - 1510971 - g 70 -8.1 -3.73775 | opp_overlap 1510970 1510976 CGCACCGCCAGTAAA CCGGT GACC ACCGG GCTTTATGACCTTAT YPO1346 1510239 - 1511027 + | hypothetical protein YPO1347 1511020 - 1512390 + | hypothetical protein YPO1348 1512387 - 1513232 + | hypothetical protein TERM 1620 1513395 - 1513361 - T 100 -12.2 -3.90112 | opp_overlap 1513360 1513359 GGGGCGTTAAGGAAA CCGGATCATCACGCAA TTT CTGGTTGATGATCCGG CGTTGTCGCATAAGG artM 1514090 - 1513422 - | arginine transporter permease subunit ArtM artQ 1514806 - 1514090 - | arginine transporter permease subunit ArtQ TERM 1621 1514787 - 1514752 - G 82 -10.4 -3.89346 | gap 1, opp_overlap 1514758, overlap 1514753 GTGCCAGTGCACAAA CGGCAAG-GCCGACGGT CAT ACCGGCGGCACTTGCTA AAGGTTGAAATTCAT TERM 1622 1514786 - 1514753 - G 76 -11.7 -2.93393 | gap 1, opp_overlap 1514758, overlap 1514752 TGCCAGTGCACAAAC GGCAAG-GCCGACGGT CAT ACCGGCGGCACTTGCT AAAGGTTGAAATTCA artI 1515549 - 1514818 - | arginine-binding periplasmic protein 1 precursor artP 1516298 - 1515570 - | arginine transporter ATP-binding subunit TERM 1623 1516562 - 1516534 - R 78 -8.8 -3.89354 | TTTGTAAATCAATAA GTACCGGGCCAC GGGAA GGAACCCGGTAC GAAAGATGTGTGGCC YPO1353 1517153 - 1516593 - | chorismate mutase YPO1354 1517898 - 1517323 - | putative lipoprotein YPO1355 1519002 - 1517995 - | hypothetical protein TERM 1624 1518809 - 1518819 + g 71 -6.8 -4.2349 | AGCGTATCGACATCC GCCA GCA TGGC TTTTGCCTGTGAGGA YPO1356 1520592 - 1519102 - | hypothetical protein ltaA 1521608 - 1520589 - | L-threonine aldolase poxB 1523678 - 1521957 - | pyruvate dehydrogenase TERM 1625 1522149 - 1522134 - G 70 -9 -3.58343 | opp_overlap 1522127 GCCAGGATGTGCAAA GGCACT TTCC AGTGCC GCATTTAACTCAGAG hcr 1524844 - 1523822 - | HCP oxidoreductase, NADH-dependent TERM 1626 1524943 - 1524909 - R 76 -10 -3.39288 | overlap 1524897 1524907 CAGCGTGCAATAATA GCCCGGTCAACGGC GAGAAAG GCGATTGACCAGGC AAGGTATAATTAACT hcp 1526610 - 1524958 - | hydroxylamine reductase TERM 1627 1526416 - 1526404 - G 70 -3.3 -4.83615 | overlap 1526405 CAGCGTTGAGAAAAA TGCTC TGG GGGCA AAGCTGTCAATTTGG TERM 1628 1526781 - 1526769 - R 76 -6.9 -4.44548 | overlap 1526770 TATAGGGAAGGAAAA GCCCC CAG AGGGC GGGGGGGGGCGACTG YPO1361 1527708 - 1526812 - | hypothetical protein TERM 1629 1528386 - 1528372 - g 76 -5.7 -4.72201 | opp_overlap 1528372 GTGGATAAAAAATAA CGATG GGTTA CATCG TATCTACTATCGAGT TERM 1630 1528910 - 1528898 - g 83 -9.1 -4.42238 | TTATTGCAAGCAAAA GGCTC ACT GAGCC TCGATCCTCATGCCC TERM 1631 1529473 - 1529490 + G 78 -2.6 -5.24129 | CCTAACAATTTTGCC TGCACC CGATAT GGAGCA TTTTTTATACCGCGC YPO1362 1528061 - 1529728 + | hypothetical protein YPO1363 1530812 - 1529865 - | putative virulence factor YPO1364 1531046 - 1532161 + | macrolide transporter subunit MacA YPO1365 1532161 - 1534110 + | macrolide transporter ATP-binding /permease protein TERM 1632 1534288 - 1534255 - T 100 -11.2 -4.63007 | opp_overlap 1534261, overlap 1534261 TAGAAGTAGATAAAA TAAAAATGCCAGTC GTCATT GACTGGCATTTTGA ATCAAAGTACAGGTA TERM 1633 1534261 - 1534282 + T 93 -10.9 -4.18494 | opp_overlap 1534255 1534261 TAGATAAAATAAAAA TGCCAGTCG TCAT TGACTGGCA TTTTGAATCAAAGTA TERM 1634 1534282 - 1534261 - T 100 -10.2 -5.58522 | opp_overlap 1534261, overlap 1534255 TAGATAAAATAAAAA TGCCAGTC GTCATT GACTGGCA TTTTGAATCAAAGTA cspD 1534654 - 1534391 - | cold shock-like protein TERM 1635 1534621 - 1534607 - G 82 -8.6 -4.44046 | opp_overlap 1534607 1534606 CTCAGGGCAAATAAA GCCAAA ACC TTTGGC GTTGTTGAACCATTT TERM 1636 1535093 - 1535070 - g 76 -6 -4.73432 | gap 1, opp_overlap 1535070 1535074 TCAAAGATAAACAAA TCG-AGGCGCT TCA ACCGCCTTCGA TGTATAAAGTGATAC clpS 1535015 - 1535335 + | ATP-dependent Clp protease adaptor protein ClpS TERM 1637 1535342 - 1535330 - f 71 -4.8 -4.58395 | TGTACGCTGGAAAAA GCCT GATTA AGGC AATTATTGGGAGGTG clpA 1535361 - 1537637 + | ATP-dependent Clp protease ATP-binding subunit TERM 1638 1537751 - 1537778 + F 100 -10.7 -5.18726 | gap 1, opp_overlap 1537751 ATCCAGTAAAATAAA GGGCGATA-GCT AAAAC AGCGTATCGCCC TTTTTATTGTGCCCA TERM 1639 1537778 - 1537751 - f 100 -11.4 -4.7261 | gap 1, opp_overlap 1537751 ATCCAGTAAAATAAA GGGCGATA-GCTA AAA CAGCGTATCGCCC TTTTTATTGTGCCCA TERM 1640 1537799 - 1537817 + F 100 -16 -3.07307 | opp_overlap 1537799 ATTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC TERM 1641 1537817 - 1537799 - f 100 -16 -4.37092 | opp_overlap 1537799 ATTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC tnp 1537930 - 1538388 + | transposase for the IS1541 insertion element TERM 1642 1538466 - 1538490 + T 88 -9.9 -4.15788 | opp_overlap 1538469, overlap 1538468 1538469 ATAGGCGCATATGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTGCCAACGTT TERM 1643 1538468 - 1538488 + T 100 -12.5 -3.6761 | opp_overlap 1538469, overlap 1538466 1538469 AGGCGCATATGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTGCCAACG TERM 1644 1538469 - 1538487 + T 100 -16 -2.80244 | opp_overlap 1538469, overlap 1538468 1538466 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTGCCAAC TERM 1645 1538487 - 1538469 - T 100 -16 -4.8048 | opp_overlap 1538469 1538468 1538466 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTGCCAAC TERM 1646 1538701 - 1538676 - T 100 -13.3 -4.36778 | overlap 1538670 AAAGATAACGCAAAA CGCCCTTGCCA TAAA TGGGAAGGGCG CCGGAGGGGGACTAC infA 1538978 - 1538760 - | translation initiation factor IF-1 aat 1539854 - 1539144 - | leucyl/phenylalanyl-tRNA--protein transferase cydC 1541797 - 1540073 - | cysteine/glutathione ABC transporter membrane/ATP-binding component cydD 1543584 - 1541800 - | cysteine/glutathione ABC transporter membrane/ATP-binding component TERM 1647 1541966 - 1541988 + g 73 -9 -3.72893 | AGCAGGGTAGACTGC GCACGGGAGG CCT CCTCCAGCGC TTTCATCACCAACTG TERM 1648 1542719 - 1542698 - G 78 -3.7 -5.19212 | gap 1, overlap 1542699 1542706 ATTAGCACCAAAAAA CCGGCA-AAC AGC GTTACGCCGA GGCCATAGCTACCAA TERM 1649 1543506 - 1543517 + g 87 -7.2 -5.04249 | overlap 1543497 GGCGGAGCCAACGTT GCGC GGGG GCGC TTTGTTTTTTCAGCC TERM 1650 1543967 - 1543943 - R 100 -9.2 -5.53079 | overlap 1543944 AAAACAGATAAAAAA GCGGGTGGCC CATGT AGCCACCCGT ATAGAACGAGGTGAA TERM 1651 1543966 - 1543944 - R 100 -12.7 -3.88187 | overlap 1543943 AAACAGATAAAAAAG CGGGTGGCC CATGT AGCCACCCG TATAGAACGAGGTGA trxB 1544987 - 1544025 - | thioredoxin reductase TERM 1652 1544878 - 1544894 + g 70 -8 -3.66178 | opp_overlap 1544891 CCGCCCTTTTCCATC CCGGTA ATCAA TACCGG TTTCAGGTTGGCACG TERM 1653 1545074 - 1545054 - H 90 -4 -5.59357 | opp_overlap 1545054 ATGACATTAAAAAAA GCAAACAA AAATG TTGTTAGC AATTTTTTTGATAGG TERM 1654 1546067 - 1546050 - g 70 -4.2 -4.65895 | TGCCGCAGTTAAAAA TCTTGA GGAAAT TCAAGA GTGTCACTTGGTCTC lrp 1545754 - 1546248 + | leucine-responsive transcriptional regulator TERM 1655 1546306 - 1546332 + F 100 -15.2 -3.14463 | opp_overlap 1546302, overlap 1546309 TTATTCATACAGTTT CAACGCCGGGGA GGC TTCTCGGCGTTG TTGCTCAGACCCGTT TERM 1656 1546309 - 1546329 + F 84 -11.1 -3.71848 | opp_overlap 1546302, overlap 1546306 TTCATACAGTTTCAA CGCCGGGGA GGC TTCTCGGCG TTGTTGCTCAGACCC TERM 1657 1546601 - 1546611 + G 71 -6.8 -4.13767 | TGACACGCTGTTTTC CACC TTT GGTG TTTTAGCCTACGCAA TERM 1658 1547128 - 1547163 + G 72 -3.9 -4.77165 | TGGGGGCGGGTGTTG CGGCCTCATCGGCGT TAGCCC ATGGCGATGATGACG TTTTGTTCTCAGCCC TERM 1659 1547872 - 1547841 - g 71 -5 -4.54026 | opp_overlap 1547850, overlap 1547838 1547845 TCCCAAATAAAACAA GGTATTGGCCCTGA ATTG CCACGGCCAAATCC GGTTCGTATTCCAAC TERM 1660 1548035 - 1548065 + G 70 -9.1 -3.57144 | gap 1, opp_overlap 1548032 1548030, overlap 1548033 1548036 ATCTGATGAAGATGC TGCTTTGCAGCAGG CTAT CTTGC-GCAAAGCG TTTGCCGATCAGCAA TERM 1661 1548356 - 1548375 + G 83 -10 -4.14004 | opp_overlap 1548352 AGTCGATGACAGCCC GCGTGAGC CTCT GTTCACGC TTTCTCCTTATGTTG ftsK 1546371 - 1550288 + | putative cell division protein lolA 1550481 - 1551089 + | outer-membrane lipoprotein carrier protein TERM 1662 1551147 - 1551164 + G 80 -10.5 -3.6715 | opp_overlap 1551145 TGAGTTTCAACCACT GGCCGCG CGTA TGCGGCC TTTGACGTTGGATCA TERM 1663 1552094 - 1552111 + G 73 -6.3 -4.44046 | CCGAAGGGGAGCGGG CGATTGC CCAG GCAATTG TTTATTTAGCCTGCG YPO1378 1551100 - 1552443 + | recombination factor protein RarA TERM 1664 1552456 - 1552432 - f 93 -9.9 -4.39828 | opp_overlap 1552433 1552438 1552439 AATAGCCCGATAAAA CGCTACCGCTA GCT TTGCGGTTGCG GTAAGGTTAGCATTA TERM 1665 1553119 - 1553129 + G 70 -8.2 -3.71672 | opp_overlap 1553119 1553118 TTCTCTGGGCGAAAT GGCC GGT GGCC TTGATTTTGCTGCCG TERM 1666 1553195 - 1553183 - g 73 -9.1 -3.72576 | TTTGTGGTGATGAAA GGGCA AAT TGCCC GTATGCACCGTGCTC serS 1552685 - 1553977 + | seryl-tRNA synthetase TERM 1667 1554052 - 1554074 + F 95 -4.9 -5.76633 | gap 1, opp_overlap 1554056, overlap 1554056 GTTATCTGCTATTTC G-AAAGCGTC TACG GGCGCTTTTC TTTTTTTGTGTATCC TERM 1668 1554056 - 1554069 + F 95 -5.9 -5.61277 | opp_overlap 1554056, overlap 1554052 TCTGCTATTTCGAAA GCGTC TACG GGCGC TTTTCTTTTTTTGTG YPO1380 1554240 - 1555388 + | putative MFS family transporter protein TERM 1669 1555468 - 1555430 - T 83 -11.2 -3.43033 | gap 3, opp_overlap 1555433 1555433, overlap 1555433 TATCAATATATAAGA CAAC-GCCGCCA-GC-GGA TTCA TCCAGCATGGCGGCAGTTG TTAGGCCAAACCTAA TERM 1670 1555464 - 1555433 - T 81 -9.5 -3.83668 | gap 2, opp_overlap 1555433 1555433, overlap 1555430 CAATATATAAGACAA CGCCGCCA-GC-GGA TTCA TCCAGCATGGCGGCA GTTGTTAGGCCAAAC pflA 1556276 - 1555542 - | pyruvate formate lyase-activating enzyme 1 YPO1382 1557263 - 1557937 + | hypothetical protein TERM 1671 1558001 - 1558021 + T 90 -11.1 -3.97088 | opp_overlap 1558001 CTCTGAATGAATAAA GGCCCCACA ATA TGTGGAGCC TTTCATGTTGTAACA TERM 1672 1558021 - 1558001 - T 100 -13.3 -4.3255 | opp_overlap 1558001 CTCTGAATGAATAAA GGCCCCACA ATA TGTGGAGCC TTTCATGTTGTAACA pfl 1560337 - 1558055 - | formate acetyltransferase 1 TERM 1673 1559915 - 1559929 + g 76 -2.8 -5.1925 | overlap 1559923 GTTATGTGTTTTACG GTATTC GGT GAAGAC TTTTTTCAGTTGTGG focA 1561250 - 1560393 - | formate transporter YPO1385 1563713 - 1561947 - | hypothetical protein TERM 1674 1563080 - 1563093 + g 86 -8.1 -4.62069 | GCAAGCTGATGGACT CCGCA ATAA TGCGG TTTTTCACATAACGC ansB 1563862 - 1564899 + | L-asparaginase II TERM 1675 1564911 - 1564938 + F 100 -13.6 -3.53343 | TTGATACTGTGACTT TTTTGCGAAGGC TACG GTCTTCGCAAAA TTTCCGCCAGACATT TERM 1676 1566207 - 1566228 + G 76 -12.3 -3.0264 | overlap 1566226 GAGTCAATGTTTCTG CCGACACTG AAGG CGGTGTCGG TGTTGCAGCGGGTTT YPO1387 1565168 - 1566262 + | hypothetical protein YPO1388 1566262 - 1568130 + | hypothetical protein TERM 1677 1568246 - 1568232 - f 71 -8.6 -3.56568 | opp_overlap 1568232 CAAGCAGCGTTCAAA TCTGCT CCC AGCAGA TTTGTCACCCCAGTC TERM 1678 1568232 - 1568246 + F 75 -8.6 -3.86015 | opp_overlap 1568232 CAAGCAGCGTTCAAA TCTGCT CCC AGCAGA TTTGTCACCCCAGTC serC 1568497 - 1569582 + | phosphoserine aminotransferase TERM 1679 1569577 - 1569624 + F 73 -9.8 -3.02511 | overlap 1569569 TTTGAACGCCGCCAT GGCTGATTTTTCTGGAGCGGGT ACTC ATCCGCTCCGGATCGATGGGCC TCTTGCAACAATGAG aroA 1569745 - 1571031 + | 3-phosphoshikimate 1-carboxyvinyltransferase TERM 1680 1571324 - 1571281 - f 76 -11.2 -2.59881 | opp_overlap 1571266 1571285, overlap 1571280 GATGCAGCGTATAAT GC-TACCTCTGTGTCTGCCC TGCCGG GGGCAGACA-AGAGGTTTGC CTACCGAAAGGAGAG TERM 1681 1571285 - 1571319 + F 100 -15.9 -3.64703 | gap 1, opp_overlap 1571281 1571280, overlap 1571266 CAGCGTATAATGCTA CCTCTGTGTCTGCCCT GCCG GGGGCAGACA-AGAGG TTTGCCTACCGAAAG TERM 1682 1571535 - 1571552 + G 72 -4.1 -4.86731 | ATTGGTACCACTTGC CGCACAT CTCG ATGTTCG TTTTGTTTCACAGAA cmk 1571344 - 1572036 + | cytidylate kinase rpsA 1572210 - 1573883 + | 30S ribosomal protein S1 ihfB 1573944 - 1574228 + | integration host factor subunit beta TERM 1683 1574274 - 1574293 + F 100 -7.1 -5.81412 | opp_overlap 1574274 AACGCTGATACGAAA CGGTGCC CTTATC GGCATCG TTTTTTTTGCGTAAA YPO1394 1574775 - 1577066 + | hypothetical protein TERM 1684 1577416 - 1577438 + G 70 -2.7 -4.78326 | CCGCCGCCGCTTATT CAGCCATAT GATGG GTATGCCTG TTTCTTTCTTTGACC TERM 1685 1577648 - 1577664 + G 74 -6.5 -4.33274 | GTGTCTATTTCGATC CGTCTGG TAT CCAAACG TTTTCGTAATATCAG msbA 1577102 - 1578850 + | lipid transporter ATP-binding/permease protein TERM 1686 1579041 - 1579031 - g 71 -6.8 -4.19238 | opp_overlap 1579030 GGGGGAACGGTAAAA CACC GGT GGTG ATCTGGTTGGTTGAA lpxK 1578847 - 1579833 + | tetraacyldisaccharide 4'-kinase YPO1397 1581277 - 1579841 - | hypothetical protein TERM 1687 1579875 - 1579906 + g 76 -11 -3.18681 | gap 1, overlap 1579880 1579881 AGTTTGAGGGCGGCT GCACATTCAGCAACG GAA CGTTGCTGGGT-TGC TTCGTAGAGTTGCAG TERM 1688 1579880 - 1579902 + g 75 -10.6 -3.40639 | overlap 1579875 1579881 GAGGGCGGCTGCACA TTCAGCAACG GAA CGTTGCTGGG TTGCTTCGTAGAGTT TERM 1689 1579881 - 1579901 + g 73 -11.9 -2.63901 | overlap 1579880 1579875 AGGGCGGCTGCACAT TCAGCAACG GAA CGTTGCTGG GTTGCTTCGTAGAGT TERM 1690 1581837 - 1581815 - H 74 -4.3 -4.93877 | gap 1 TCTCAGGAAATAAAA TGATTATGCA AGCG TGC-TAATCA TTCACCAAGATAGAC TERM 1691 1581880 - 1581865 - H 71 -4.6 -4.70046 | opp_overlap 1581866, overlap 1581866 GACAAAATTACAAAA CCCGCA ATTA TGCGGT TTTTTCATAAAATCA TERM 1692 1581866 - 1581879 + H 95 -8.1 -5.15634 | opp_overlap 1581865 1581866 ACAAAATTACAAAAC CCGCA ATTA TGCGG TTTTTTCATAAAATC cspB 1581996 - 1582205 + | cold shock-like protein TERM 1693 1582211 - 1582231 + F 100 -12.6 -4.00468 | opp_overlap 1582211 CGCTTTCTAAGCAAA CGGCTACC TCATC GGTAGCCG TTTCTCCCTTCTCGT TERM 1694 1582231 - 1582211 - f 100 -12.6 -3.90112 | opp_overlap 1582211 CGCTTTCTAAGCAAA CGGCTACC TCATC GGTAGCCG TTTCTCCCTTCTCGT YPO1399 1582753 - 1582935 + | hypothetical protein kdsB 1582932 - 1583684 + | 3-deoxy-manno-octulosonate cytidylyltransferase TERM 1695 1583705 - 1583729 + F 100 -12.1 -4.15703 | opp_overlap 1583701 GCGACGGAAACTTTA CGCCAGAACCT ACC GGGCTCTGGCG TTGTTATTTCTAACC YPO1401 1584047 - 1584940 + | hypothetical protein TERM 1696 1585994 - 1585980 - g 70 -4.2 -4.7373 | overlap 1585982 GCAGCTCACGAAAAA GGTGTG AGC CACAAC ATGCAATTTATACAA TERM 1697 1586083 - 1586115 + G 70 -4.2 -4.7373 | gap 1, opp_overlap 1586083 1586086, overlap 1586085 1586086 1586086 ATGCGGTATTAGAAT GGATT-GCTGAACCT CAGC AGGTTCTGCAAATAC TTTTTGATACGCTAA smtA 1585713 - 1586498 + | putative metallothionein SmtA mukF 1586495 - 1587817 + | condesin subunit F mukE 1587825 - 1588526 + | condesin subunit E TERM 1698 1589168 - 1589178 + G 71 -6.8 -4.20367 | overlap 1589167 AGCGCCATTACTCGC TCGC TAC GCGA TTATTTATTGCCAGA TERM 1699 1591917 - 1591903 - g 72 -8.5 -3.82603 | AATGGTGAAAGATAA CGGCG TTGAG CGCCG CTTGCACCGCCGTGA mukB 1588523 - 1592980 + | cell division protein MukB TERM 1700 1593025 - 1593044 + F 90 -7.1 -5.18726 | opp_overlap 1593025 ATTAGTTTTATTAAA TGGTCGC ACAGAA GCGGCCA TTTTTATTGTGCCCA TERM 1701 1593065 - 1593083 + F 100 -16 -3.07307 | opp_overlap 1593065 ATTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC TERM 1702 1593083 - 1593065 - f 100 -16 -4.37092 | opp_overlap 1593065 ATTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC tnp 1593196 - 1593654 + | transposase for the IS1541 insertion element TERM 1703 1593728 - 1593760 + F 100 -11.3 -5.26918 | opp_overlap 1593735, overlap 1593734 1593735 CCTTATAGGCGCATA TGAAAAACCTCCGGC TAT GCCGGAGGATATTTA TTTTTTGTAACATCT TERM 1704 1593734 - 1593754 + F 100 -12.5 -4.17307 | opp_overlap 1593735, overlap 1593728 1593735 AGGCGCATATGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTTTTTGTA TERM 1705 1593735 - 1593753 + F 100 -16 -3.07944 | opp_overlap 1593735, overlap 1593734 1593728 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTTTTGT TERM 1706 1593753 - 1593735 - f 100 -16 -4.8048 | opp_overlap 1593735 1593734 1593728 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTTTTGT TERM 1707 1595766 - 1595779 + G 74 -2.3 -5.08601 | opp_overlap 1595744 CTGGTGCACAAATCT CACAG CAGG CTGAG TTTTTATTGCAATAA YPO1407 1593938 - 1595794 + | hypothetical protein YPO1408 1596018 - 1596566 + | hypothetical protein YPO1409 1596627 - 1597274 + | metallo-beta-lactamase superfamily protein TERM 1708 1597368 - 1597397 + T 74 -7.9 -3.94482 | opp_overlap 1597369 1597375, overlap 1597370 1597375 AGATGAATGTTCAAT AGCAAAAGATGCC GGAA GGCGTCTTTTGTG TTCTCTTTCGTTTAT TERM 1709 1597370 - 1597395 + T 100 -12.7 -3.53929 | opp_overlap 1597369 1597375, overlap 1597368 1597375 ATGAATGTTCAATAG CAAAAGATGCC GGAA GGCGTCTTTTG TGTTCTCTTTCGTTT TERM 1710 1597375 - 1597390 + T 82 -6.8 -4.80729 | opp_overlap 1597375 1597369, overlap 1597370 1597368 TGTTCAATAGCAAAA GATGCC GGAA GGCGTC TTTTGTGTTCTCTTT TERM 1711 1597447 - 1597478 + T 100 -14.6 -2.77013 | opp_overlap 1597454, overlap 1597454 GTCATCGAGTGACCA GTCAAAAGGATGGC TTGG GCCATCCTTTTGAG GTTATTGACAAAGTG TERM 1712 1597454 - 1597471 + T 100 -11.3 -4.24123 | opp_overlap 1597454, overlap 1597447 AGTGACCAGTCAAAA GGATGGC TTGG GCCATCC TTTTGAGGTTATTGA TERM 1713 1597471 - 1597454 - T 100 -11.3 -4.21462 | opp_overlap 1597454 1597447 AGTGACCAGTCAAAA GGATGGC TTGG GCCATCC TTTTGAGGTTATTGA TERM 1714 1597552 - 1597578 + T 72 -10.1 -2.88849 | gap 1, opp_overlap 1597541, overlap 1597547 1597553 ACATCCATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCTCTGCC TERM 1715 1597553 - 1597579 + T 84 -10.1 -3.82218 | gap 1, opp_overlap 1597541, overlap 1597547 1597552 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCTCTGCCT TERM 1716 1597643 - 1597660 + T 100 -11.3 -4.4767 | opp_overlap 1597646 TGTCAGCAGTCTGAA GGATGGC TTGG GCCATCC TTTTATGGTCAGTCA aspC 1598888 - 1597698 - | aromatic amino acid aminotransferase TERM 1717 1598471 - 1598484 + g 70 -2.3 -5.04325 | CCACTTCCAGCCCTG CGGCT TCGA AGACG TTTTTATGGTTTGGC TERM 1718 1599033 - 1599017 - R 73 -5.1 -4.62336 | overlap 1599028 1599029 ATCTGAGGTGAAAAA TCGGC AAAATAG GCCGA TAGACAGAGTAATCT TERM 1719 1599098 - 1599079 - R 100 -10 -5.48623 | opp_overlap 1599079 AAATAGAAACAAAAA GACAGAGC CGAG GCCCTGTC TTTTTTCAACTTAGG TERM 1720 1599079 - 1599098 + r 95 -7.8 -5.09426 | opp_overlap 1599079 AAATAGAAACAAAAA GACAGAGC CGAG GCCCTGTC TTTTTTCAACTTAGG ompF 1600227 - 1599145 - | Outer membrane porin protein F TERM 1721 1600491 - 1600461 - R 100 -9.8 -5.09426 | opp_overlap 1600464 1600469, overlap 1600462 1600464 1600469 TCGAATTTTAAAAAA TGATAAAAGCCAGC AGA GCTGGCTTTTATTT GTACAAATTGACGTT TERM 1722 1600490 - 1600462 - R 100 -13.3 -3.64933 | opp_overlap 1600464 1600469, overlap 1600461 1600464 1600469 CGAATTTTAAAAAAT GATAAAAGCCAGC AGA GCTGGCTTTTATT TGTACAAATTGACGT TERM 1723 1600464 - 1600488 + r 100 -15.9 -3.89614 | opp_overlap 1600464 1600462 1600461 1600469, overlap 1600469 AATTTTAAAAAATGA TAAAAGCCAGC AGA GCTGGCTTTTA TTTGTACAAATTGAC TERM 1724 1600488 - 1600464 - R 100 -15.9 -3.39328 | opp_overlap 1600464 1600469, overlap 1600462 1600461 1600469 AATTTTAAAAAATGA TAAAAGCCAGC AGA GCTGGCTTTTA TTTGTACAAATTGAC TERM 1725 1600469 - 1600483 + r 100 -11.4 -4.99043 | opp_overlap 1600469 1600464 1600462 1600461, overlap 1600464 TAAAAAATGATAAAA GCCAGC AGA GCTGGC TTTTATTTGTACAAA TERM 1726 1600483 - 1600469 - R 100 -11.4 -4.76171 | opp_overlap 1600464 1600469, overlap 1600464 1600462 1600461 TAAAAAATGATAAAA GCCAGC AGA GCTGGC TTTTATTTGTACAAA asnC 1601925 - 1600525 - | asparaginyl-tRNA synthetase pncB 1603629 - 1602424 - | nicotinate phosphoribosyltransferase TERM 1727 1602711 - 1602726 + g 85 -7.6 -4.77036 | CCAATACCTTTTTCA TTGGGT CAAT ACCCAA TTTTTCATAATGCGC TERM 1728 1604192 - 1604209 + H 93 -4.1 -5.76949 | TATTTGCCGGAGTTG CCTGGGT TCTC ATCTAGG TTTTTTTTACAACTG TERM 1729 1604458 - 1604445 - g 74 -3.7 -5.03314 | TGGATGCGCAAAAAA CGACG GTAA CGGCG GTCAGTAAAGTAAAA pepN 1604345 - 1606960 + | putative aminopeptidase N pyrD 1607578 - 1608588 + | dihydroorotate dehydrogenase 2 TERM 1730 1609045 - 1609060 + G 76 -7.6 -4.36914 | TCTTGAAACCACTCA TGCCAA AAAG TTGGCA TTTTGTACAGCAACC YPO1416 1608771 - 1609322 + | hypothetical protein YPO1417 1610460 - 1609348 - | putative iron-sulfur binding protein TERM 1731 1611575 - 1611563 - g 71 -6.2 -4.30576 | GCCGTATGATGAAAA CCGC ATTTG GCGG CTGGCGTCTGTCACT YPO1418 1610560 - 1612680 + | 23S rRNA m(2)G2445 methyltransferase TERM 1732 1614462 - 1614482 + G 77 -9.1 -4.07568 | opp_overlap 1614445, overlap 1614466 AGCAAGTTACAGGCT GAAGTCAGT GAT ACTGATTTC TTTTCCCGCCCACAC TERM 1733 1614466 - 1614478 + G 76 -6.3 -4.64861 | overlap 1614462 AGTTACAGGCTGAAG TCAGT GAT ACTGA TTTCTTTTCCCGCCC uup 1612686 - 1614599 + | ABC transporter ATPase component pqiA 1614728 - 1616014 + | putative paraquat-inducible protein A pqiB 1616028 - 1617653 + | paraquat-inducible protein B YPO1422 1617650 - 1618228 + | putative lipoprotein protein TERM 1734 1618252 - 1618293 + F 70 -5.9 -4.3851 | overlap 1618253 TCTAAATCAGTCTAA TCCTCTTTCTCTGGTAATA ATCA TCTTGTCAGGGGAAGGGGG TTTCTATTTAATATC YPO1423 1618277 - 1618417 + | hypothetical protein rmf 1618498 - 1618665 + | putative ribosome modulation factor TERM 1735 1618693 - 1618711 + F 100 -11.7 -4.48987 | opp_overlap 1618688 1618687 CATTATCAAGGGTAA CCTCCGC ATTAG GCGGAGG TTTTCATTGTGCCCA TERM 1736 1618732 - 1618750 + F 100 -16 -3.07307 | opp_overlap 1618732 ATTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC TERM 1737 1618750 - 1618732 - f 100 -16 -4.37092 | opp_overlap 1618732 ATTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC tnp 1618863 - 1619321 + | transposase for the IS1541 insertion element TERM 1738 1619395 - 1619427 + T 100 -11.3 -4.72631 | opp_overlap 1619402, overlap 1619399 1619401 1619402 CCTTATAGGCGCATA TGAAAAACCTCCGGC TAT GCCGGAGGATATTTA TTTTATTGCGTTAGT TERM 1739 1619399 - 1619423 + T 100 -9.9 -4.88795 | opp_overlap 1619402, overlap 1619395 1619401 1619402 ATAGGCGCATATGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTTTATTGCGT TERM 1740 1619401 - 1619421 + T 100 -12.5 -4.04859 | opp_overlap 1619402, overlap 1619399 1619395 1619402 AGGCGCATATGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTTTATTGC TERM 1741 1619420 - 1619402 - T 100 -16 -4.8048 | opp_overlap 1619402 1619401 1619399 1619395 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTTATTG TERM 1742 1619402 - 1619420 + T 100 -16 -3.01288 | opp_overlap 1619402, overlap 1619401 1619399 1619395 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTTATTG TERM 1743 1620261 - 1620249 - T 75 -9.1 -3.61232 | opp_overlap 1620247, overlap 1620247 TGTTTGATAGAAACA TGGCC AGC GGCCA AATTCACTAAGAATG YPO1426 1621264 - 1620482 - | transposase/IS protein TERM 1744 1621180 - 1621194 + g 77 -11.4 -3.3506 | overlap 1621193 CTGCCTGTTGTGACA GCGCAG GCG CTGCGC TTATAAGGCTTTCCA y1093 1622283 - 1621261 - | transposase for insertion sequence IS100 TERM 1745 1622305 - 1622287 - H 100 -13.2 -4.01078 | AAAAGTGACCATAAA CTCTCCTG AAT CAGGAGAG CAGATTACCCCCTGG TERM 1746 1622542 - 1622508 - H 70 -10.1 -2.52464 | gap 1 TCTTCTGCTAACGTA GGC-ACTTGCCCACCA ATTT TAGCGGGCAAGTCACC GACAATTTCATCCGA YPO1429 1622917 - 1623105 + | hypothetical protein TERM 1747 1623347 - 1623311 - T 79 -6.8 -4.69664 | gap 1, opp_overlap 1623314 1623317, overlap 1623314 TATATCACGTAAAAA CAATAAGGCG-ACATGA TTAA TCATATTCGCCTTATTT TACAATGCATTGACT TERM 1748 1623344 - 1623314 - T 87 -8.5 -4.4521 | gap 1, opp_overlap 1623314 1623317, overlap 1623311 ATCACGTAAAAACAA TAAGGCG-ACATGA TTAA TCATATTCGCCTTA TTTTACAATGCATTG fabA 1623889 - 1623371 - | 3-hydroxydecanoyl-(acyl carrier protein) dehydratase YPO1431 1625730 - 1623958 - | putative Lon protease TERM 1749 1624931 - 1624942 + g 76 -5.8 -4.65916 | opp_overlap 1624931 1624930 GCATCGGCAGATAAG GCAG GGAG CTGC TTTTGTTGCAATAGG TERM 1750 1625643 - 1625615 - G 70 -4.4 -4.61231 | TGATAGGCTGAAAAA GCAACAGGCTCC AATTG GGAGGCAGTAGC AAATAACGCTTCATA TERM 1751 1625995 - 1625983 - g 76 -4.8 -5.0133 | TATTTGGTCAAAAAA CACC GTGAA GGTG AAGCCATTACCCGCC YPO1433 1625920 - 1626375 + | hypothetical protein TERM 1752 1626470 - 1626438 - T 100 -11.3 -4.04149 | opp_overlap 1626445, overlap 1626442 1626444 1626445 GAATCACAGGATAAA TAAATATCCTCCGGC ATA GCCGGAGGTTTTTCA TATGCGCCTATAAGG TERM 1753 1626466 - 1626442 - T 100 -9.9 -4.60949 | opp_overlap 1626445, overlap 1626438 1626444 1626445 CACAGGATAAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCATATGCGCCTAT TERM 1754 1626464 - 1626444 - T 100 -12.5 -3.90309 | opp_overlap 1626445, overlap 1626442 1626438 1626445 CAGGATAAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 1755 1626445 - 1626463 + T 100 -16 -4.8048 | opp_overlap 1626444 1626442 1626438 1626445 AGGATAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 1756 1626463 - 1626445 - T 100 -16 -2.93101 | opp_overlap 1626445, overlap 1626444 1626442 1626438 AGGATAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC tnp 1627002 - 1626544 - | transposase for the IS1541 insertion element TERM 1757 1627115 - 1627133 + r 100 -16 -4.36914 | opp_overlap 1627115 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 1758 1627133 - 1627115 - R 100 -16 -3.07307 | opp_overlap 1627115 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 1759 1627154 - 1627170 + r 100 -10.8 -4.56597 | opp_overlap 1627154 TGGGCACAAAAAAAA CCCCGC ATAGC GCGGGG TTTTTCACGAAAGAA TERM 1760 1627170 - 1627154 - R 100 -11.5 -5.93809 | opp_overlap 1627154 TGGGCACAAAAAAAA CCCCGCA TAG CGCGGGG TTTTTCACGAAAGAA ompA 1628253 - 1627192 - | outer membrane protein A TERM 1761 1628303 - 1628327 + r 71 -5 -4.62336 | CTTTAAAAGCTAAGC CCTTGGTTAA AATTC TTCGCCAAGG TTTTTACGCTCCCGT sulA 1629117 - 1628611 - | SOS cell division inhibitor TERM 1762 1629246 - 1629265 + H 75 -5.8 -4.68506 | CATTTTATGTTTGGC TACGTAAT CCAT ATTGCGTA TTTTTGCAATTAGTT YPO1437 1629346 - 1629981 + | hypothetical protein TERM 1763 1630055 - 1630073 + T 84 -11.7 -3.09933 | opp_overlap 1630054 1630055 ATGAAACCGTATAAT GGGCCAC GATGG GTGGCCC TTGGGTACCTTAGGC TERM 1764 1630073 - 1630055 - T 80 -11.7 -2.63747 | opp_overlap 1630055, overlap 1630054 ATGAAACCGTATAAT GGGCCAC GATGG GTGGCCC TTGGGTACCTTAGGC YPO1438 1632221 - 1630083 - | hypothetical protein TERM 1765 1630818 - 1630796 - G 71 -7.1 -4.19369 | gap 1, opp_overlap 1630799 ACGCAAAAAACAGAA CACCACTGAT CACA ATCAG-GGTG AGTTGCCCCTCAATA YPO1439 1632697 - 1632251 - | hypothetical protein TERM 1766 1632739 - 1632729 - H 71 -2.4 -5.08824 | opp_overlap 1632738 CGTTGAGTGAAAAAA CCGC AAT GTGG CTGAGCGATAGCCTA helD 1632891 - 1634876 + | DNA helicase IV TERM 1767 1634903 - 1634932 + T 86 -11.5 -3.29187 | gap 1, opp_overlap 1634908, overlap 1634908 1634927 AAGCGATGCTCAATA CTAAACCCGGTGGT TGA ACCACCGGGTG-AG TTACCTATTTTAGGT TERM 1768 1634908 - 1634928 + T 100 -16.9 -2.58183 | opp_overlap 1634908, overlap 1634903 1634927 ATGCTCAATACTAAA CCCGGTGGT TGA ACCACCGGG TGAGTTACCTATTTT TERM 1769 1634928 - 1634908 - T 100 -16.9 -3.92592 | opp_overlap 1634908 1634903 1634927 ATGCTCAATACTAAA CCCGGTGGT TGA ACCACCGGG TGAGTTACCTATTTT mgsA 1635401 - 1634937 - | methylglyoxal synthase YPO1442 1636260 - 1635580 - | hypothetical protein YPO1443 1636576 - 1636992 + | hypothetical protein TERM 1770 1637057 - 1637027 - T 100 -9.7 -5.00616 | overlap 1637028 GGGCTTTCTAAAAAA GCACCCTGTCAGC GTGCT GCTCACAGGGTGG CGAACCTGGCAATCA TERM 1771 1637056 - 1637028 - T 100 -13.2 -3.60048 | overlap 1637027 GGCTTTCTAAAAAAG CACCCTGTCAGC GTGCT GCTCACAGGGTG GCGAACCTGGCAATC YPO1444 1637442 - 1637101 - | hypothetical protein YPO1445 1638669 - 1637479 - | hypothetical protein TERM 1772 1637553 - 1637528 - G 73 -10.5 -3.2964 | gap 1, opp_overlap 1637544 AAACCTTCTGGATAA GCCGC-GATCAC TGG GTGATCCGCAGC TTGGCGGAACTGCTC TERM 1773 1638919 - 1638898 - g 70 -9.5 -3.33162 | gap 1 GATGGTAGCGTAGAA GTGG-TTGCC AGC GGCAATCCAC AAGCAGTTGAACGTC YPO1446 1638763 - 1639041 + | putative acylphosphatase YPO1447 1639419 - 1639093 - | putative sulfite reductase subunit protein TERM 1774 1640647 - 1640659 + r 75 -2 -5.29782 | opp_overlap 1640647 TATATATCCAATATA TACT CACGA AGTA TTTTTTATGGATATA TERM 1775 1643045 - 1643026 - R 91 -10.6 -4.08064 | AAGTTCGCCGTAAAA CCCCGTCC TTCA GGGCGGGG AGATAAGGCGCTGAG YPO1451 1645485 - 1643068 - | putative oxidoreductase YPO1452 1646385 - 1645639 - | putative short chain dehydrogenase TERM 1776 1645882 - 1645892 + g 74 -6.8 -4.28548 | AGTAGTCGCAACCTC CAGC GCT GCTG TTTTGGTCAATCCCT YPO1453 1647014 - 1647334 + | hypothetical protein YPO1454 1647664 - 1648122 + | putative (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydrase TERM 1777 1648334 - 1648352 + G 71 -5.2 -4.56597 | ATTCCCGATATAGTT CTTTCCCG TGC CGAGAAGG TTTTTAAACAGACGA YPO1455 1648112 - 1649395 + | putative beta-ketoacyl-[acyl-carrier-protein] synthase TERM 1778 1649390 - 1649403 + G 74 -2.4 -5.07486 | TTTAGTCGATATCAT GGTT AACATG AACC TTTTTATTAGCGGTG YPO1456 1649388 - 1650134 + | putative beta-ketoacyl-[acyl-carrier-protein] reductase TERM 1779 1651012 - 1651000 - g 74 -4.1 -5.03715 | opp_overlap 1651000 ATTACGCGCAAAAAA TAGGC GCG ACCTA TTGTGGCAGCATTTT YPO1457 1650150 - 1651388 + | putative hydroxymethylglutaryl-coenzyme A synthase TERM 1780 1651666 - 1651676 + G 70 -3.2 -4.87592 | GGGCTTGCCTTACTG TCGG TTG TCGA TTTTATTCTGTCTAG YPO1458 1651381 - 1652100 + | putative enoyl-CoA hydratase YPO1459 1652093 - 1652854 + | polyketide biosynthesis enoyl-CoA hydratase YPO1460 1652857 - 1653645 + | putative short chain dehydrogenase YPO1461 1653684 - 1654172 + | hypothetical protein YPO1462 1654210 - 1654458 + | putative acyl carrier protein YPO1463 1654557 - 1655405 + | putative acyl transferase YPO1464 1655562 - 1655729 + | hypothetical protein TERM 1781 1655979 - 1655954 - f 82 -4.8 -5.41143 | opp_overlap 1655956, overlap 1655956 CATTTCTGAAAAAAA TATTTGTAGG CGAATT CCTACAAATC ACTTCCCAAATTCCT TERM 1782 1655977 - 1655956 - f 75 -7.4 -4.34482 | opp_overlap 1655956, overlap 1655954 TTTCTGAAAAAAATA TTTGTAGG CGAATT CCTACAAA TCACTTCCCAAATTC YPO1465 1656394 - 1656894 + | hypothetical protein TERM 1783 1656982 - 1656960 - g 71 -6.3 -4.34402 | gap 1, overlap 1656961 GTCTGTACAGGAAAA CCGTGCGCAG GGTA CTGCG-ACGA CCGTATTAAAGAATA YPO1466 1656937 - 1658487 + | hypothetical protein TERM 1784 1658515 - 1658532 + G 71 -5.5 -4.54727 | TGAAGATTGAACGTC CTCTGTG GACT CGCGGAG TTTTGATTTCCCCGC TERM 1785 1658581 - 1658562 - g 90 -13.6 -3.68936 | CAGCAATTTCAACAA CAGGCCTC CTGG GAGGCCTG GACCAATGAATGCAT YPO1467 1658499 - 1659851 + | hypothetical protein TERM 1786 1660138 - 1660155 + G 74 -2.6 -5.09225 | overlap 1660140 1660141 CTTCGTGTGGTGCCA TTCGCC CTTACA GGCGCA TTTTTTCAATACCCT YPO1468 1659848 - 1660534 + | hypothetical protein TERM 1787 1661621 - 1661651 + G 77 -10.4 -3.61398 | GGGTGGCCTTTGATA TCCGTCAGTACCAC AGC GTGGCGATGACGGA TTATTCCCCGAAAGC YPO1469 1660534 - 1662270 + | hypothetical protein YPO1470 1662274 - 1662765 + | hypothetical protein TERM 1788 1662971 - 1662990 + F 100 -9.2 -5.72118 | opp_overlap 1662969, overlap 1662972 ACGTTGTCATCAACT TCAGGCGG TTCG CCGCCTGC TTTTTTGTGTTTTTT TERM 1789 1662972 - 1662989 + F 100 -12.7 -3.9778 | opp_overlap 1662969, overlap 1662971 CGTTGTCATCAACTT CAGGCGG TTCG CCGCCTG CTTTTTTGTGTTTTT TERM 1790 1663886 - 1663863 - g 71 -6 -4.40561 | overlap 1663860 CCGCCGTAAAAACAA CCCGATTC TGGTGGGT GAACCGGG TGTGGGGAAAACCGC YPO1471 1663153 - 1665795 + | putative ATPase subunit of ATP-dependent protease YPO1472 1665798 - 1668146 + | hypothetical protein YPO1473 1668162 - 1670462 + | hypothetical protein YPO1474 1670459 - 1671232 + | hypothetical protein YPO1475 1671386 - 1671646 + | hypothetical protein TERM 1791 1671844 - 1671860 + G 91 -6.5 -5.09895 | overlap 1671840 1671847 GGAGCAAGTGCGTGC CATTGCC GAC GGCACTG TTTTTTCAGTACGTC TERM 1792 1673149 - 1673169 + G 84 -2.5 -5.55664 | opp_overlap 1673149 1673153, overlap 1673152 1673153 AAAATATTTAATCAA CACACCATT CCG AATGGCCTG TTTTTTTGGTAATGC TERM 1793 1673291 - 1673307 + G 76 -2.9 -5.09426 | AATATTTGGTATTAC CCGTG GTATGGG CGCGG TTTTTTGCAATTAAC YPO1476 1671662 - 1673845 + | hypothetical protein TERM 1794 1674254 - 1674240 - g 72 -3.6 -4.75518 | TATATAAAATTAAAA CTTTAC AAT ATAAAG TCCCCAAACTCTTTG YPO1477 1674018 - 1674488 + | hypothetical protein TERM 1795 1676813 - 1676830 + G 86 -9.1 -4.44915 | AGTTCTGGTGGTTTG CCATCGG TATC CCGGTGG TTTTCTGGCTGGTTC YPO1481 1676764 - 1677885 + | hypothetical protein TERM 1796 1679365 - 1679353 - g 70 -10.5 -3.01791 | AGCTGCCCGCCAACA GCCCG CAA CGGGC AGCACGGGCAAAAAC TERM 1797 1679419 - 1679380 - g 73 -5 -4.60487 | CAGCACGGGCAAAAA CAGGCTATGACCAGTTAA AGGC TTATCTGATGATGGCCCG CCCGGAAAAAGCCGA TERM 1798 1679576 - 1679588 + G 71 -10.5 -3.14344 | opp_overlap 1679575 1679572 GGACTGGAAAATTAC CCCGG ATA CCGGG TTGATCAGCCAGGTG TERM 1799 1679836 - 1679821 - g 76 -6 -4.61199 | overlap 1679823 AGGCGATAGATAAAA CGGTGG CCTC CCGCCG CGAAGAAATTGACTG TERM 1800 1680281 - 1680260 - g 74 -6.5 -4.42653 | overlap 1680263 AGGCGATGCACAAAA CAGGCTGTC GTCG GACAGCTCG CTGAGCCTGCAAACG YPO1482 1677882 - 1681304 + | hypothetical protein TERM 1801 1682087 - 1682069 - g 74 -6.6 -4.371 | opp_overlap 1682080, overlap 1682063 1682080 1682082 TCGATCAGACCAAAA CGCTGGCA AAA TACCTGCG CAACCAGCCGCAGGG TERM 1802 1682208 - 1682182 - g 70 -11.4 -2.54523 | TTAGATGTGAACGGA CGGACCCGGCTG GTA CCGCCGCGCCCG GAATATCGCGTACAA YPO1483 1681348 - 1682949 + | hypothetical protein YPO1484 1682940 - 1684025 + | hypothetical protein TERM 1803 1684366 - 1684382 + G 71 -6.5 -4.254 | overlap 1684377 ACAAGCATTTATGCT CACCAGA GCC TCTGGAG TTTGTTCAGTATTGA YPO1484a 1684025 - 1684495 + | hypothetical protein TERM 1804 1685421 - 1685398 - gf 83 -11.8 -2.82516 | gap 1, opp_overlap 1685396 1685391 1685400, overlap 1685400 TCGGGGAGCAGGATA CACTGT-GGCC GAA GGCCGACAGTG CGTTCAGTGGTTATC YPO1485 1684716 - 1686479 + | hypothetical protein YPO1486 1686443 - 1687528 + | hypothetical protein YPO1487 1687596 - 1688084 + | hypothetical protein YPO1488 1688084 - 1688536 + | hypothetical protein TERM 1805 1688667 - 1688651 - g 71 -5 -4.56702 | opp_overlap 1688657 1688660, overlap 1688653 GGTGAATTAAATAAA CTGGCC CACCC GGCCCG CCCGGATGTTGATTG TERM 1806 1689200 - 1689215 + G 79 -9 -4.19817 | AGCGAACCGGCCCCG CCACCT GTTC AGGTGG TTTTACCTGCCTCAC YPO1489 1688561 - 1689928 + | hypothetical protein TERM 1807 1690081 - 1690032 - T 81 -10.8 -3.27923 | gap 1, opp_overlap 1690037, overlap 1690036 1690041 TTTGAATATTATTAA TTAATGATAGCGCTCACAGCGGG GTGAT CCTGCTG-GAGCGCGACCTTTAA ACTGTATTAACACCA TERM 1808 1690037 - 1690076 + T 90 -11.4 -3.66883 | gap 1, opp_overlap 1690036 1690032 1690041 ATATTATTAATTAAT GATAGCGCTCACAGCGGGG TGA TCCTGCTG-GAGCGCGACC TTTAAACTGTATTAA TERM 1809 1690072 - 1690041 - T 93 -12.3 -2.97613 | gap 1, opp_overlap 1690037, overlap 1690036 1690032 TATTAATTAATGATA GCGCTCACAGCGGG GTGAT CCTGCTG-GAGCGC GACCTTTAAACTGTA YPO1490 1690763 - 1690140 - | hypothetical protein TERM 1810 1690575 - 1690560 - G 76 -3.2 -5.18371 | TTCGACAAAATAAAA CTCAGC TGTT GTTGAG GCGTTATAGCGTTCT TERM 1811 1690643 - 1690653 + g 82 -4 -5.28166 | overlap 1690630 TATGTTGGGTCTCAG CATT TAT AATG TTTTTGTTGATTTTC TERM 1812 1691241 - 1691267 + H 73 -3.6 -5.02502 | TATATAGGTAAAACG TCGTGTCTGCGA GCT TTGATGGCACGA TTTTTCTGTCATGTC ybiT 1691446 - 1693041 + | ABC transporter ATP-binding protein TERM 1813 1693067 - 1693085 + F 100 -11 -5.80248 | opp_overlap 1693067 GACCTAACAAAAAAA GCTGATGC TAT GCGTCAGC TTTTTTTATGTCTTC TERM 1814 1693085 - 1693067 - f 100 -8.8 -5.8187 | opp_overlap 1693067 GACCTAACAAAAAAA GCTGATGC TAT GCGTCAGC TTTTTTTATGTCTTC YPO1492 1693269 - 1693922 + | hypothetical protein TERM 1815 1693939 - 1693927 - T 100 -7.7 -5.5762 | AGCAAATATAAAAAA GACAG AGC CTGTC CATAATTCTGTGTAA TERM 1816 1693992 - 1693971 - T 84 -10.1 -3.74693 | TGCCACCGTATTAAA GGTGATCGC TCAG GCGGTCACC GAACTCGATAATAAA y1062 1695174 - 1693966 - | transposase moeB 1696077 - 1695310 - | molybdopterin biosynthesis protein MoeB moeA 1697356 - 1696082 - | molybdopterin biosynthesis protein MoeA TERM 1817 1697510 - 1697535 + r 100 -11.3 -4.34345 | AAAAATGAGATGGCT TGATACTGCTT TTAC GAGCAGTATCA TTTTCATCGTATATA TERM 1818 1697731 - 1697743 + r 74 -6.3 -4.56775 | CTTCAATATAACTTT CATTG CAA CAATG TTTTTACCAACACAT TERM 1819 1697896 - 1697867 - R 72 -9.3 -3.11687 | opp_overlap 1697865 TGAATCATGAGGCAA CGTTGACGCCATA ATGA TGTGGCTTCAACG AATATCTGCCAGATA YPO1496 1699201 - 1697891 - | putative heme-binding protein YPO1497 1699879 - 1699211 - | ABC transporter ATP-binding protein YPO1498 1701143 - 1699881 - | hypothetical protein YPO1499 1703505 - 1701145 - | hypothetical protein TERM 1820 1701845 - 1701859 + g 78 -5.8 -4.76041 | opp_overlap 1701845 TTTGTCGCTATAGCA TGATAA GTA TTATCA TTTTTACTGGGTGTA TERM 1821 1702124 - 1702143 + g 76 -5.8 -4.72272 | AATTCATCGCTTAGT GGAAATGT CACG ACATTTTC TTTTTCATAACCAAA TERM 1822 1702532 - 1702522 - G 73 -5.4 -4.72272 | TGTTGCGATGAAAAA TGAC TCT GTCA GTAATTGATAATTAG TERM 1823 1703235 - 1703245 + g 100 -5.4 -5.81622 | GTAAAGCGTAGGCGA CATC TTT GATG TTTTTTTCATTTTGT YPO1500 1703801 - 1703589 - | hypothetical protein TERM 1824 1704018 - 1704005 - R 95 -8.1 -5.10461 | opp_overlap 1704001 TCTATCGAATAAAAA GCCCT CGAA AGGGC TTGGGGTTTTATGTG YPO1501 1704900 - 1704058 - | putative esterase TERM 1825 1704861 - 1704815 - G 75 -10.9 -3.47345 | gap 1, opp_overlap 1704819, overlap 1704816 1704819 AAGGTCATATGACAA TTCAGGCTGCTGGCAGCATGGC GGTA GCGCTGTTGCCAGCAGCC-AAA CATCCGATGCTCTTC TERM 1826 1704861 - 1704816 - G 76 -12.5 -2.67925 | opp_overlap 1704819, overlap 1704815 1704819 AGGTCATATGACAAT TCAGGCTGCTGGCAGCATGGC GGTA GCGCTGTTGCCAGCAGCCAAA CATCCGATGCTCTTC TERM 1827 1704858 - 1704819 - G 91 -16.4 -2.6252 | opp_overlap 1704819, overlap 1704815 1704816 TCATATGACAATTCA GGCTGCTGGCAGCATGGC GGTA GCGCTGTTGCCAGCAGCC AAACATCCGATGCTC YPO1502 1706054 - 1704921 - | probable alcohol dehydrogenase TERM 1828 1705947 - 1705937 - G 72 -8.2 -3.87815 | overlap 1705921 CGTCAGTGTGACAAA CGCC ACT GGCG ACAATCCGCACTAAC YPO1503 1707203 - 1706334 - | putative LysR-family transcriptional regulatory protein TERM 1829 1707714 - 1707754 + G 79 -11.7 -3.19824 | overlap 1707708 1707713 1707713 1707715 GCACATTTTGGCCGT CCGGCGCTCAGTGCGGC CGTATTT GCCGGGCCGGGTGCCGG TATATTCATTAGTGG YPO1504 1707339 - 1708490 + | hypothetical protein TERM 1830 1708612 - 1708584 - f 93 -13.3 -2.84 | opp_overlap 1708607, overlap 1708581 ATCACTGGATAATCA TTTCGCTCTCAAT TAG AGTGAGAGCGAAA TTCGGGTGTGACCCG folE 1708674 - 1709336 + | GTP cyclohydrolase I TERM 1831 1709791 - 1709805 + G 70 -10 -3.30418 | overlap 1709789 1709788 CAGCCAGCTTATTAC GTACCG GCG CGGTAC TCTATTTGATCGGTG TERM 1832 1710169 - 1710181 + G 80 -4.7 -5.14965 | overlap 1710170 ATGTCGGTTGGGATT ACCGC TGG GCGGG TTTTTTGCTACAAGT TERM 1833 1710170 - 1710180 + G 70 -8.2 -3.68256 | overlap 1710169 TGTCGGTTGGGATTA CCGC TGG GCGG GTTTTTTGCTACAAG yeiB 1709391 - 1710557 + | hypothetical protein TERM 1834 1712276 - 1712254 - g 76 -3.4 -5.14698 | opp_overlap 1712255, overlap 1712255 AAATTGAAAACAAAA TCGTACGTAT TCC ATACGTAGGT GTTGATAAAGATAAT mglB 1711305 - 1712312 + | galactose-binding protein TERM 1835 1712803 - 1712783 - g 74 -6.9 -4.30448 | overlap 1712776 AAATTGAATTTAAAA GTTCTAAAG AAG CATTAGAAC AGGGTGTTTCGATGG TERM 1836 1712865 - 1712894 + G 86 -2.8 -5.64274 | opp_overlap 1712862 1712865 1712867, overlap 1712867 TACAGTAATGGACAA CATGTGGTTGGG GCGCTA TCCAACCAAAGG TTTTTTTGTCGATCA mglA 1712542 - 1714062 + | galactose/methyl galaxtoside transporter ATP-binding protein mglC 1714083 - 1715093 + | beta-methylgalactoside transporter inner membrane component TERM 1837 1715275 - 1715249 - T 100 -13.1 -4.68846 | gap 1, opp_overlap 1715244 AGGAATAAAGTAAAA GCCAGTCAGGGC GATA GCCCT-ACTGGC TGAAGTTAATGACAA sanA 1716275 - 1715538 - | hypothetical protein TERM 1838 1715685 - 1715673 - G 71 -6.9 -4.26871 | CAATGGACCAAGAAA GCGAG GTT CCCGC TTAAGAATATAGAGG TERM 1839 1716441 - 1716452 + r 71 -3 -5.06816 | CGCATGTGCTTTGGG GTTA CAAG TAAC TTTTTGTTCAACGCT TERM 1840 1716522 - 1716549 + r 73 -8.3 -3.65812 | overlap 1716523 GATAGCATCTGAGTA CCCGGCCTGCG GTATAG CACAGGCCGGA TTATATTCAAAACGA TERM 1841 1716523 - 1716548 + r 83 -11.8 -2.79273 | overlap 1716522 ATAGCATCTGAGTAC CCGGCCTGCG GTATAG CACAGGCCGG ATTATATTCAAAACG sfcA 1718253 - 1716556 - | malate dehydrogenase TERM 1842 1717162 - 1717178 + g 78 -2.2 -5.25803 | ATTGTGCAGATTCCA GTGGTG TAGGT CGTCAC TTTTTTGTACCAATT cdd 1719493 - 1718609 - | cytidine deaminase TERM 1843 1719808 - 1719784 - R 71 -9.3 -2.98729 | overlap 1719764 GATAAGGATTACAGA CCCTGACGT CGCTATC ACGCCAGGG GAAAGTGGGTTCAAC yohK 1720514 - 1719819 - | hypothetical protein TERM 1844 1720077 - 1720061 - G 82 -7.3 -4.62904 | AAATACCGGCAAAAA TAACGCA AAC TGCGCTA ATAGCGGGTAAACCA yohJ 1720918 - 1720511 - | hypothetical protein TERM 1845 1720896 - 1720878 - G 70 -8.8 -3.6512 | TAAATAATGGTGAAA GCTCGCAG GTA CTGCCAGC AAAGTGACATCATAT YPO1515 1722341 - 1721160 - | putative multidrug resistance protein TERM 1846 1721419 - 1721408 - G 73 -5.8 -4.5442 | CGCCCAATGAGAAAA TGGC CATT GCCA GCATCCATAACGGAA TERM 1847 1722318 - 1722344 + g 74 -2.2 -5.16681 | opp_overlap 1722297, overlap 1722323 AATCAGCAGATTGGT TACGCGCGATGA GAA TCTTTGCATGTA TTTTCTTATTTTTAG TERM 1848 1722497 - 1722524 + r 93 -9.8 -4.39226 | opp_overlap 1722499, overlap 1722494 1722499 GAAAATTTTTGCAGG AAGCAGTTCGGC CAGA GCCGATCTGCTA TTATTTTCTAGTTAT TERM 1849 1722522 - 1722499 - R 93 -12.4 -3.1506 | opp_overlap 1722497 1722494 1722499 AAATTTTTGCAGGAA GCAGTTCGGC CAGA GCCGATCTGC TATTATTTTCTAGTT TERM 1850 1722499 - 1722522 + r 100 -12.4 -3.78091 | opp_overlap 1722499, overlap 1722497 1722494 AAATTTTTGCAGGAA GCAGTTCGGC CAGA GCCGATCTGC TATTATTTTCTAGTT YPO1516 1723930 - 1722674 - | hypothetical protein TERM 1851 1723734 - 1723748 + g 90 -9.2 -4.63184 | opp_overlap 1723734 GGCGCAGCGATGAAA CCTGCG GGA CGCGGG TTTTTGGCATCCCTT TERM 1852 1723893 - 1723873 - G 74 -11.1 -3.15544 | opp_overlap 1723874 1723876, overlap 1723876 GGTCACTGTGACCAA TCAGCCGCA TAT TGCGGCTGT ATTCAGGTATCGGCA TERM 1853 1723874 - 1723892 + g 86 -14.6 -3.07962 | opp_overlap 1723873 1723876, overlap 1723876 GTCACTGTGACCAAT CAGCCGCA TAT TGCGGCTG TATTCAGGTATCGGC TERM 1854 1723876 - 1723890 + g 74 -11.4 -3.09785 | opp_overlap 1723873 1723876, overlap 1723874 CACTGTGACCAATCA GCCGCA TAT TGCGGC TGTATTCAGGTATCG TERM 1855 1723890 - 1723876 - G 71 -11.4 -2.78216 | opp_overlap 1723876 1723874, overlap 1723873 CACTGTGACCAATCA GCCGCA TAT TGCGGC TGTATTCAGGTATCG YPO1517 1725036 - 1723945 - | putative sugar ABC transporter TERM 1856 1725653 - 1725663 + H 86 -3.2 -5.61689 | GCCTATTTTTATATA TCGC GCA GTGA TTTTTTATTAATTTT TERM 1857 1726088 - 1726102 + G 72 -3.6 -4.84274 | GTGTGGTTTGATCTA GATGAT GCG ATTATC TTTTTGATGTCGTTA YPO1518 1725854 - 1726381 + | hypothetical protein TERM 1858 1726417 - 1726453 + T 71 -8.8 -3.28712 | gap 1, opp_overlap 1726422, overlap 1726422 ACGGGTTTCAATCAT AAAAATGCCGGT-AGGG TTAC CCCAGACCGGCATTTTG TTGTGCCCAGAAAAC TERM 1859 1726448 - 1726422 - T 100 -8.7 -4.98255 | gap 1, opp_overlap 1726422 1726417 TTTCAATCATAAAAA TGCCGGT-AGGG TTAC CCCAGACCGGCA TTTTGTTGTGCCCAG TERM 1860 1726422 - 1726448 + T 100 -8.7 -4.77165 | gap 1, opp_overlap 1726422, overlap 1726417 TTTCAATCATAAAAA TGCCGGT-AGGG TTAC CCCAGACCGGCA TTTTGTTGTGCCCAG TERM 1861 1726468 - 1726486 + T 100 -16 -3.07307 | opp_overlap 1726468 GTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC TERM 1862 1726486 - 1726468 - T 100 -16 -4.36914 | opp_overlap 1726468 GTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC YPO1519 1727428 - 1726646 - | transposase/IS protein TERM 1863 1727344 - 1727358 + g 77 -11.4 -3.3506 | overlap 1727357 CTGCCTGTTGTGACA GCGCAG GCG CTGCGC TTATAAGGCTTTCCA y1093 1728447 - 1727425 - | transposase for insertion sequence IS100 TERM 1864 1728469 - 1728451 - H 100 -13.2 -4.01078 | AAAAGTGACCATAAA CTCTCCTG AAT CAGGAGAG CAGATTACCCCCTGG tnp 1728558 - 1729016 + | transposase for the IS1541 insertion element TERM 1865 1729090 - 1729122 + T 100 -11.3 -4.43208 | opp_overlap 1729097, overlap 1729094 1729096 1729097 CCTTATAGGCGCATA TGAAAAACCTCCGGC TAT GCCGGAGGATATTTA TTTCTTTAAGGATCT TERM 1866 1729094 - 1729118 + T 100 -9.9 -4.78326 | opp_overlap 1729097, overlap 1729090 1729096 1729097 ATAGGCGCATATGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTTCTTTAAGG TERM 1867 1729096 - 1729116 + T 100 -12.5 -3.99693 | opp_overlap 1729097, overlap 1729094 1729090 1729097 AGGCGCATATGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTTCTTTAA TERM 1868 1729097 - 1729115 + T 100 -16 -2.98189 | opp_overlap 1729097, overlap 1729096 1729094 1729090 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTCTTTA TERM 1869 1729115 - 1729097 - T 100 -16 -4.8048 | opp_overlap 1729097 1729096 1729094 1729090 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTCTTTA metG 1731207 - 1729180 - | methionyl-tRNA synthetase YPO1523 1731472 - 1732584 + | putative ATPase TERM 1870 1732656 - 1732618 - f 86 -11.8 -3.07344 | opp_overlap 1732632 TGAGCGCGTAACACA CTGAGCCGGAAAGGTCAT TCA ATGATGCTTCCGGCTCAA GATCGGCTTAAATAG TERM 1871 1733161 - 1733145 - g 74 -2.2 -5.0666 | overlap 1733146 CACGTAAAAAAGAAA CGGTTC ATTTA GAACCT AAAAAAGTGATCATT udk 1732829 - 1733470 + | uridine kinase dcd 1733575 - 1734156 + | deoxycytidine triphosphate deaminase TERM 1872 1734271 - 1734298 + F 71 -4.8 -4.63592 | CGCTTTCCCTTCATT TGACTTGGTCAG CAGT CTGGACTAGTCA TTCTTTTTATTGAGA TERM 1873 1734482 - 1734468 - g 76 -4.2 -4.99638 | overlap 1734470 ACAGGTAGAGAAAAA GAGTGG TTA CCACTT GCAGTTGGAGGGTGA TERM 1874 1736171 - 1736157 - g 72 -3.5 -4.79174 | ACGTAACCAACAAAA TCGCC GTGTG GACGA TCTGAAAAAGTCACT YPO1526 1734343 - 1736199 + | putative assembly protein TERM 1875 1736289 - 1736254 - T 82 -10.5 -3.61922 | gap 1, opp_overlap 1736255 1736256 1736258, overlap 1736256 1736258 AATAGGTAGTGGAAA GAGATAGGCCCGATGG TTTCT CCACCGGGCCTAA-TC ATTTATTTTTCCAGG TERM 1876 1736255 - 1736290 + T 100 -8.3 -4.85782 | gap 1, opp_overlap 1736254 1736256 1736258, overlap 1736256 1736258 ATAGGTAGTGGAAAG AGA-TAGGCCCGATGG TTTCT CCACCGGGCCTAATCA TTTATTTTTCCAGGC TERM 1877 1736289 - 1736256 - T 100 -14 -3.38522 | gap 1, opp_overlap 1736256 1736255 1736258, overlap 1736254 1736258 TAGGTAGTGGAAAGA GA-TAGGCCCGATGG TTTCT CCACCGGGCCTAATC ATTTATTTTTCCAGG TERM 1878 1736256 - 1736289 + T 91 -11.8 -3.50746 | gap 1, opp_overlap 1736254 1736256 1736258, overlap 1736255 1736258 TAGGTAGTGGAAAGA GA-TAGGCCCGATGG TTTCT CCACCGGGCCTAATC ATTTATTTTTCCAGG TERM 1879 1736286 - 1736258 - T 100 -16.8 -3.26031 | opp_overlap 1736258 1736256 1736255, overlap 1736254 1736256 GGTAGTGGAAAGAGA TAGGCCCGATGG TTTCT CCACCGGGCCTA ATCATTTATTTTTCC TERM 1880 1736258 - 1736286 + T 100 -14.6 -2.57916 | opp_overlap 1736254 1736256 1736258, overlap 1736256 1736255 GGTAGTGGAAAGAGA TAGGCCCGATGG TTTCT CCACCGGGCCTA ATCATTTATTTTTCC YPO1527 1737930 - 1736344 - | hypothetical protein TERM 1881 1738022 - 1738000 - H 72 -7.1 -3.91716 | gap 1 CCATTTGTTAAAGAA GTGCATCGAC CAGA GTCGAT-CAC AAAAAAATCAATCCA YPO1528 1738372 - 1739151 + | ferric iron reductase involved in ferric hydroximate transport TERM 1882 1739152 - 1739180 + F 72 -7.5 -3.9751 | opp_overlap 1739156 AATCTTATTAGTTAG CCAAGTTCCTG CATTAGA CAGAAACTTGG TTGTATTCTTTATTT TERM 1883 1739787 - 1739766 - g 74 -6.5 -4.37886 | overlap 1739768 GGACCCGCGATAAAA TGGCCCTAG GTAG CCAGGGCGA CGGTATTTTCACCAG TERM 1884 1740488 - 1740507 + G 74 -7.9 -4.14874 | CTACGGATTATGGGA GCCAAAC AGCTTG GTTTGGC TTTTGAACATGTTAT YPO1529 1739303 - 1740850 + | putative decarboxylase TERM 1885 1742152 - 1742135 - g 70 -2.7 -4.87665 | opp_overlap 1742137, overlap 1742137 1742151 TCCGATTGAGAAAAA CATTGCT TTTC AGCAATT CAGTGCGCCATCACT alcA 1740885 - 1742183 + | putative siderophore biosynthetic enzyme alcB 1742180 - 1742761 + | putative siderophore biosynthetic enzyme TERM 1886 1744519 - 1744506 - g 72 -8.1 -3.96469 | opp_overlap 1744505 1744506 ACAGCTCAACAATAA CCAGC ACAT GCTGG ATTTAGCTGACCCTG YPO1532 1742758 - 1744602 + | putative siderophore biosynthetic enzyme YPO1533 1745559 - 1744711 - | putative iron-siderophore transport system,ATP-binding component YPO1534 1746596 - 1745556 - | putative iron-siderophore transport system,membrane permease component YPO1535 1747623 - 1746583 - | putative iron-siderophore transport system,transmembrane component TERM 1887 1746859 - 1746821 - G 70 -2.9 -4.75472 | gap 1, overlap 1746822 1746823 1746825 GCCAGACCAATAAAA GC-GACCGGACCCGCTAC TGCC GTCGCGGTAGCGGCCAGC AATGTTGCGCCTACT TERM 1888 1747163 - 1747151 - G 75 -9.1 -3.84246 | opp_overlap 1747151 1747149 CCGGTAAGCACCAAA CGCAC CGA GTGCG TATTCCGTTGCCCGC YPO1536 1748699 - 1747620 - | putative iron-siderophore transport system,periplasmic binding protein TERM 1889 1748766 - 1748745 - R 71 -8.7 -3.39908 | overlap 1748743 CGTTGGCAAAAGATA CAGCCGG AAAAGTGG CCGGCTG TGAGGGTATCCAACT YPO1537 1751050 - 1748789 - | putative iron-siderophore receptor TERM 1890 1750091 - 1750124 + g 80 -13.9 -3.00946 | overlap 1750088 1750104 TCGGGTTTCGGCGGA TGCCCAATCCGATGC GGTG GTGGCGGATTGGGCA TAATTTGTCCGCCCA TERM 1891 1750253 - 1750265 + g 73 -3.3 -5.01811 | opp_overlap 1750254, overlap 1750254 1750256 ATCTATCTCCAAGAT ACCGT AAA ACGGG TTTTTACTTTGATCA TERM 1892 1751013 - 1751030 + g 89 -2.5 -5.70829 | opp_overlap 1751014, overlap 1751014 1751016 GTGCAGTTAAAACGC ACTCGGC TTTT GCCGTGA TTTTTTTCTAGTATT YPO1538 1753077 - 1751263 - | putative siderophore biosynthetic enzyme TERM 1893 1752604 - 1752591 - G 74 -4.5 -4.83615 | gap 1 TATTCGCGATAAAAA CG-GGG TGG CCCTCG CTCATCGCTGTTTCT TERM 1894 1754716 - 1754705 - g 71 -5.8 -4.36914 | overlap 1754707 CGTTGCTTGAGAAAA CACC ACGT GGTG CGGGGGATGAAATTC galU 1754023 - 1754913 + | UTP-glucose-1-phosphate uridylyltransferase galF 1754997 - 1755890 + | UTP-glucose-1-phosphate uridylyltransferase TERM 1895 1755969 - 1755984 + F 89 -10.4 -4.01603 | overlap 1755964 1755981 TTGGCAGTTTAGGCC GCGCCA TTTG TGGCGC TTTGCTCTTTGCCTA gnd 1756276 - 1757685 + | 6-phosphogluconate dehydrogenase TERM 1896 1757856 - 1757832 - T 100 -8.6 -5.06414 | opp_overlap 1757832 GCTGCCCAATAAAAA CGCCTCCA GTGATAAGT TGGAGGCG TTTTTTTGCCAGTGA TERM 1897 1757832 - 1757856 + T 100 -10 -5.42259 | opp_overlap 1757832 GCTGCCCAATAAAAA CGCCTCCAGT GATAA GTTGGAGGCG TTTTTTTGCCAGTGA hisI 1758499 - 1757885 - | bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein hisF 1759269 - 1758493 - | imidazole glycerol phosphate synthase subunit HisF TERM 1898 1758798 - 1758810 + g 73 -9.1 -3.77206 | CCCAATCTTCGGTTT GCCAC GTG GTGGC TTTGGTACGCTTCTC hisA 1759988 - 1759251 - | 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase TERM 1899 1759803 - 1759823 + g 73 -9 -3.65902 | opp_overlap 1759788 CTCGCGCAGTAGTGG GATCTGGC GAGCG GCCGGATC TTTGGCTCCGGTCAG hisH 1760584 - 1759994 - | imidazole glycerol phosphate synthase subunit HisH hisB 1761651 - 1760584 - | imidazole glycerol-phosphate dehydratase/histidinol phosphatase hisC 1762796 - 1761648 - | histidinol-phosphate aminotransferase hisD 1764130 - 1762799 - | histidinol dehydrogenase TERM 1900 1764053 - 1764067 + g 70 -2.1 -4.93316 | gap 1, overlap 1764062 TGCATTGATGGCTGG GCGGCT CAAC AGC-GC TTTTTGCTGTTCTTC hisG 1765033 - 1764134 - | ATP phosphoribosyltransferase TERM 1901 1764170 - 1764188 + g 73 -10.2 -3.33711 | opp_overlap 1764163 1764170 1764169 1764166 CGGTAATACCAGAAT GGAGCTGG CAC CCAGCGCC TTCAATTTCTCCATG TERM 1902 1765207 - 1765256 + G 72 -10.1 -3.48395 | gap 1, opp_overlap 1765219, overlap 1765219 GTCTATAAAATGATG AGCAATAAAAAAGCCCTCGGAAGA TTA TCTTCCGAGGGCTCTCT-ACTGCG TTCTCTACGCCACCT TERM 1903 1765245 - 1765219 - g 100 -21 -5.52023 | opp_overlap 1765207 1765219 ATGAGCAATAAAAAA GCCCTCGGAAGA TTA TCTTCCGAGGGC TCTCTACTGCGTTCT TERM 1904 1765219 - 1765245 + G 100 -21 -2.96538 | opp_overlap 1765219, overlap 1765207 ATGAGCAATAAAAAA GCCCTCGGAAGA TTA TCTTCCGAGGGC TCTCTACTGCGTTCT YPO1550 1765123 - 1765347 + | hypothetical protein YPO1551 1765739 - 1766566 + | hypothetical protein YPO1552 1767155 - 1766721 - | hypothetical protein YPO1553 1768395 - 1767400 - | ribose transport system, permease protein YPO1556 1770218 - 1771309 + | hypothetical protein TERM 1905 1771419 - 1771444 + F 100 -7.6 -6.15259 | opp_overlap 1771419 1771422 ATACGCCGAATGAAA TAGCCGACGT TTAAAC GCGTCGGTTA TTTTTTTTTGCATTC TERM 1906 1771606 - 1771621 + F 74 -10.4 -2.57132 | overlap 1771605 GTGCCCACCGGTATG CGCTGC ACAT GCAGCG ATTATGGCGCAGCAG yeeF 1771769 - 1773160 + | Amino acid permease TERM 1907 1773193 - 1773216 + T 100 -11.8 -5.47159 | gap 1, opp_overlap 1773193 CATTAAGTTTATCAA TCCGGC-ACAG TCT CTGTTGCCGGA TTTTTTGTATTCAGA TERM 1908 1773216 - 1773193 - T 86 -11.8 -3.19157 | gap 1, opp_overlap 1773193 CATTAAGTTTATCAA TCCGGC-ACAG TCT CTGTTGCCGGA TTTTTTGTATTCAGA TERM 1909 1773778 - 1773767 - T 71 -4.4 -4.84761 | AGATGCTGACAAAAA GAAC TTAA GTTC ACTGCCGCACAGGCA sbcB 1775327 - 1773897 - | exonuclease I YPO1559 1775590 - 1776729 + | hypothetical protein YPO1560 1777163 - 1777480 + | hypothetical protein TERM 1910 1777537 - 1777559 + F 100 -11.3 -5.16841 | opp_overlap 1777535 AGGGGAAAGAGAGTG GGGCTGGCA TCTAT TGTCAGCCC TTTTTATTGGTGTGC TERM 1911 1779033 - 1779054 + G 77 -10.1 -3.74693 | TTTATTATCGAGTTC GGTGACCGC CTGA GCGATCACC TTTAATACGGTGGCA y1062 1777851 - 1779059 + | transposase for the IS285 insertion element TERM 1912 1781026 - 1781039 + F 71 -6.7 -4.21773 | TTGTGCTGTGGCATT TGCCA CTAA TGGCA TTGTTTGTCTTGCCG TERM 1913 1782718 - 1782701 - f 76 -2.7 -5.38054 | opp_overlap 1782715, overlap 1782715 TTTTATAAATAAAAA TGACATT TTAA AAAGTCA ATCTGACATTATTCT TERM 1914 1782725 - 1782715 - f 73 -5.4 -4.65168 | opp_overlap 1782715, overlap 1782701 ATGACATTTTAAAAA GTCA ATC TGAC ATTATTCTGAAAACA TERM 1915 1783784 - 1783795 + G 70 -2.2 -4.92314 | CCCGCCGTGGGGTTA GGTA TTTT TGCC TTTTTCTACCTTGAT YPO1563 1783103 - 1784503 + | putative transmembrane transporter YPO1564 1784937 - 1784512 - | hypothetical protein YPO1565 1785362 - 1786102 + | putative oxidoreductase YPO1566 1786150 - 1786992 + | putative hydrolase YPO1567 1787099 - 1788301 + | putative racemase YPO1568 1788380 - 1788553 + | hypothetical protein TERM 1916 1788802 - 1788814 + G 70 -9.1 -3.50853 | CTTTTCGGCGAGACG CAGGC AAT GCCTG TTGTCCTTGGGCCAG lldD 1788598 - 1789743 + | L-lactate dehydrogenase TERM 1917 1789869 - 1789840 - T 83 -10.7 -3.4678 | overlap 1789841 ACTGTGACACGAGAA GGGTTAAGGGGGG GAAG CTCCCCTTAACCG CTTGGGGTCGCGCAG TERM 1918 1789868 - 1789841 - T 95 -14.2 -2.67747 | overlap 1789840 CTGTGACACGAGAAG GGTTAAGGGGGG GAAG CTCCCCTTAACC GCTTGGGGTCGCGCA argG 1791315 - 1789948 - | argininosuccinate synthase TERM 1919 1791845 - 1791856 + G 85 -3.6 -5.47821 | CGACAGTTTCAATAT GCTG ATTG CGGC TTTTTTTGCCTCCGT yeeO 1791609 - 1793039 + | hypothetical protein YPO1572 1794407 - 1793067 - | putative sugar transporter TERM 1920 1794357 - 1794388 + g 86 -3 -5.65177 | gap 1, overlap 1794360 1794361 GACATCTTTGATTGT TAATTGCTG-CGGCT GCC AGCCATCAGCAGATA TTTTTTTATAGATGT YPO1573 1795351 - 1794443 - | putative polysaccharide deacetylase TERM 1921 1795092 - 1795102 + g 76 -8.2 -4.21141 | ACTTCGTGTCCAGCC GCGG CTA CCGC TTTCATTTGTTCAGG YPO1574 1795901 - 1796596 + | hypothetical protein TERM 1922 1796795 - 1796776 - g 90 -8.6 -5.06103 | AGAACGGCTAAAAAA TCACGAGC TCAG ACTCGTGA GGCAAGAGAGGCTGT TERM 1923 1796839 - 1796827 - g 91 -3.3 -5.83211 | GAGGAAAATAAAAAA GCACA ACT TGAGC GTGATAAACAGCTAA YPO1575 1796713 - 1797225 + | hypothetical protein TERM 1924 1797292 - 1797328 + T 79 -6.8 -4.66537 | gap 1, opp_overlap 1797299 1797305 1797306, overlap 1797295 AATCTTTACAAATAC TCATAGATGAAAAGTCC CTCA GGGCTTTTCAT-TAAGA TTTTATGTTCAGCCA TERM 1925 1797560 - 1797537 - T 100 -11 -4.81851 | opp_overlap 1797537 ACTGAAATGCAAAAA CCCTGCTTAG TTAC CTAGGCAGGG TTCTTTAATTTGGCT TERM 1926 1797537 - 1797560 + T 100 -13.2 -4.15998 | opp_overlap 1797537 ACTGAAATGCAAAAA CCCTGCTTAG TTAC CTAGGCAGGG TTCTTTAATTTGGCT TERM 1927 1798038 - 1797981 - T 82 -10.2 -3.68988 | gap 3, opp_overlap 1797983 1797984 1797996, overlap 1797982 1797996 GGCGAGGTAACAGAA TCCTCAGCGCCTAAATACCGTCTTGCCAA CTA TCGGCAAG-CGGTATTTAGGC-C-GCAAA TGGTTTGCCCGACTT TERM 1928 1798040 - 1797982 - T 100 -16.3 -2.81072 | opp_overlap 1797983 1797984 1797996, overlap 1797981 1797996 GCGAGGTAACAGAAT CCTCAGC-GCCTAAATACCGTCTTGCCAA CTA TCGGCAAG-CGGTATTTAGGCCGCAAATG GTTTGCCCGACTTCA TERM 1929 1797984 - 1798038 + T 95 -13.1 -2.90992 | opp_overlap 1797981 1797982 1797996, overlap 1797983 1797996 GAGGTAACAGAATCC TCAGCG-CCTAAATACCGTCTTGCCAA CTA TCGGCAAG-CGGTATTTAGGCCGCAAA TGGTTTGCCCGACTT TERM 1930 1797996 - 1798025 + T 78 -10.1 -3.53224 | gap 1, opp_overlap 1797996 1797981 1797982, overlap 1797984 1797983 TCCTCAGCGCCTAAA TACCGTCTTGCCAA CTA TCGGCAAG-CGGTA TTTAGGCCGCAAATG TERM 1931 1798025 - 1797996 - T 100 -12.3 -3.55444 | gap 1, opp_overlap 1797984 1797983 1797996, overlap 1797981 1797982 TCCTCAGCGCCTAAA TACCGTCTTGCCAA CTA TCGGCAAG-CGGTA TTTAGGCCGCAAATG YPO1576 1798721 - 1798092 - | putative GerR-family transcriptional regulatory protein TERM 1932 1799018 - 1799002 - R 73 -8.7 -3.40558 | overlap 1799000 TATATATTCCAAACA TCCGTGG CAA CCACAGA GAGATTTCCGGAATA YPO1577 1800271 - 1798979 - | putative C4-dicarboxylate transporter, large subunit YPO1578 1800797 - 1800291 - | putative C4-dicarboxylate transporter, small subunit TERM 1933 1800630 - 1800618 - G 74 -7.7 -4.15044 | CGCTGCGCCAATAAA GGTGA ACG TCACC ATACATAAAATAGCG TERM 1934 1800910 - 1800884 - R 75 -10.3 -2.73875 | overlap 1800881 CGTTGGGTAATATCA GCGGTATTAAA AATAA TTCAATACCGC CGGATGGATGTTATT YPO1579 1801913 - 1800921 - | putative C4-dicarboxylate transporter,periplasmic protein YPO1580 1802436 - 1803176 + | putative phosphopantetheinyl transferase TERM 1935 1803557 - 1803538 - T 95 -12.8 -2.94322 | opp_overlap 1803534, overlap 1803535 ATTGGACGCAAAGTA GGCCGCCA TAAA CGGCGGCC TGAGGTTAATTTACG rafA 1805689 - 1803563 - | alpha-galactosidase TERM 1936 1808251 - 1808272 + G 77 -10.1 -3.74693 | TTTATTATCGAGTTC GGTGACCGC CTGA GCGATCACC TTTAATACGGTGGCA y1062 1807069 - 1808277 + | transposase for the IS285 insertion element TERM 1937 1808589 - 1808610 + F 75 -7.3 -4.371 | TAACGAGGATCAATG CGGCTCATT ACCG AGTGAGCTG TTTTAGTATACTCAA TERM 1938 1808789 - 1808767 - g 86 -5.4 -5.26875 | overlap 1808745 1808768 GTTTTAAGCAAAAAA GGCTGAGGAG CGA CTCCCCGGCA AAATGGTATTGTGGT TERM 1939 1808788 - 1808768 - g 73 -8.9 -3.75402 | overlap 1808745 1808767 TTTTAAGCAAAAAAG GCTGAGGAG CGA CTCCCCGGC AAAATGGTATTGTGG YPO1585 1808703 - 1808843 + | hypothetical protein dinI 1809287 - 1809042 - | DNA damage-inducible protein I pyrC 1810646 - 1809600 - | dihydroorotase YPO1588 1810881 - 1811168 + | hypothetical protein TERM 1940 1811355 - 1811310 - T 100 -15 -4.62957 | gap 1, overlap 1811315 1811316 1811341 AGAATCAAAGTAAAA TTAA-ACGGCCTGAGTCCGGT GCAGT ACCGAACTCAGGCCATGTCAA CCGCCAGAGAAAGTG TERM 1941 1811349 - 1811315 - T 100 -18.7 -4.29472 | overlap 1811310 1811316 1811341 CAAAGTAAAATTAAA CGGCCTGAGTCCGGT GCAGT ACCGAACTCAGGCCA TGTCAACCGCCAGAG TERM 1942 1811348 - 1811316 - T 100 -20 -3.16056 | overlap 1811315 1811310 1811341 AAAGTAAAATTAAAC GGCCTGAGTCCGGT GCAGT ACCGAACTCAGGCC ATGTCAACCGCCAGA TERM 1943 1811471 - 1811450 - T 84 -10.1 -3.74693 | TGCCACCGTATTAAA GGTGATCGC TCAG GCGGTCACC GAACTCGATAATAAA y1062 1812653 - 1811445 - | transposase for the IS285 insertion element rne 1816414 - 1812749 - | ribonuclease E TERM 1944 1813561 - 1813584 + g 80 -12.4 -3.43203 | overlap 1813570 1813572 1813573 GTGGGGCCAGTGTTA CCGCTGCGGT GGCA ACCGCAACGG TTGGTGTTGTCATAA TERM 1945 1813841 - 1813827 - G 74 -7.8 -4.18018 | opp_overlap 1813826 TCTGGTGAGGCAAAA GCCCCT GCC AGAGGC ATGGCCGATTGTGCC TERM 1946 1815174 - 1815154 - G 71 -6.1 -4.28791 | AACGCAGAATAGAAA GTGACAGCG ATT CATTGTCAC GTACGGTGCCGGTAC TERM 1947 1815820 - 1815800 - G 74 -11.1 -3.18264 | opp_overlap 1815811 1815812, overlap 1815803 TTCCTGATGGATTAA GAAGGGCGC GGG GCGACCTTC AGCCGCTTTTTTAAT TERM 1948 1815812 - 1815826 + g 76 -2.7 -5.15634 | opp_overlap 1815803 1815800, overlap 1815811 TAAGAAGGGCGCGGG GCGAC CTTCA GCCGC TTTTTTAATCGCATC TERM 1949 1817705 - 1817688 - g 70 -9.1 -3.53811 | overlap 1817692 GCCACGCTGGTTAAA GCCAGCC CAGT GACTGGC CGGACGCATCAAATC rluC 1816989 - 1817951 + | 23S rRNA pseudouridylate synthase C TERM 1950 1817997 - 1818019 + F 100 -10.5 -5.18726 | opp_overlap 1817996 1817995 1817997 GATGATCATAAAAGG CGGGGGGCA CAGCA TGCGCCCCG TTTTTATTGTGCCCA TERM 1951 1818019 - 1817997 - f 76 -11.2 -2.56836 | opp_overlap 1817997, overlap 1817996 1817995 GATGATCATAAAAGG CGGGGGGCAC AGC ATGCGCCCCG TTTTTATTGTGCCCA TERM 1952 1818040 - 1818058 + F 100 -16 -3.07307 | opp_overlap 1818040 ATTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC TERM 1953 1818058 - 1818040 - f 100 -16 -4.37092 | opp_overlap 1818040 ATTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC tnp 1818171 - 1818629 + | transposase for the IS1541 insertion element TERM 1954 1818707 - 1818731 + T 88 -9.9 -4.21351 | opp_overlap 1818710, overlap 1818693 1818709 1818710 ATAGGCGCATATGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTCGACTGTTT TERM 1955 1818709 - 1818729 + T 100 -12.5 -3.69469 | opp_overlap 1818710, overlap 1818707 1818693 1818710 AGGCGCATATGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTCGACTGT TERM 1956 1818710 - 1818728 + T 100 -16 -2.80958 | opp_overlap 1818710, overlap 1818709 1818707 1818693 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTCGACTG TERM 1957 1818728 - 1818710 - T 100 -16 -4.8048 | opp_overlap 1818710 1818709 1818707 1818693 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTCGACTG maf 1819380 - 1818784 - | Maf-like protein TERM 1958 1819828 - 1819782 - g 70 -11.6 -2.69471 | overlap 1819781 CCATGTTCATACAAC GTATTGTTTCAGCCCGATCGTC AAT GATGAGCAGGCTGAAGCATTAC CGGAAGCGTACGAGC YPO1594 1819522 - 1820046 + | hypothetical protein rpmF 1820059 - 1820226 + | 50S ribosomal protein L32 plsX 1820260 - 1821294 + | putative glycerol-3-phosphate acyltransferase PlsX TERM 1959 1821743 - 1821768 + G 74 -9.9 -3.57263 | gap 1, opp_overlap 1821748, overlap 1821747 CCCGTGCATTGGATC CAGAA-GATCGT GGT ACGATCATTCTG TTTGGCGATGGCGCT TERM 1960 1821857 - 1821869 + G 70 -9.1 -3.63627 | overlap 1821849 CTGATGGTCGTTATG GCGAG TTG CTCGC TTTACCGTATCCAGA fabH 1821301 - 1822251 + | 3-oxoacyl-(acyl carrier protein) synthase III fabD 1822289 - 1823218 + | malonyl CoA-acyl carrier protein transacylase fabG 1823232 - 1823966 + | 3-ketoacyl-(acyl-carrier-protein) reductase acpP 1824120 - 1824356 + | acyl carrier protein TERM 1961 1824381 - 1824406 + F 100 -11.9 -5.93809 | opp_overlap 1824381, overlap 1824382 CTTTAAGTTTAGATA GTTAGGCGGTC ATTC GACCGCCTAAG TTTTTTTTGTCCGAA TERM 1962 1824406 - 1824381 - f 86 -11.9 -2.91681 | opp_overlap 1824381 1824382 CTTTAAGTTTAGATA GTTAGGCGGTC ATTC GACCGCCTAAG TTTTTTTTGTCCGAA TERM 1963 1824382 - 1824405 + F 100 -15.4 -4.15201 | opp_overlap 1824381, overlap 1824381 TTTAAGTTTAGATAG TTAGGCGGTC ATTC GACCGCCTAA GTTTTTTTTGTCCGA fabF 1824451 - 1825692 + | 3-oxoacyl-(acyl carrier protein) synthase II TERM 1964 1825718 - 1825746 + F 74 -9.6 -3.28712 | opp_overlap 1825723 1825725, overlap 1825723 TAAGGTTCTGATGCT AAAAAGGCCCGG TTTTT CCGGGTCTTTTA TTGTGCCCAGAAAAC TERM 1965 1825723 - 1825741 + F 100 -9.5 -4.77165 | opp_overlap 1825723 1825725, overlap 1825718 TTCTGATGCTAAAAA GGCCCGG TTTTT CCGGGTC TTTTATTGTGCCCAG TERM 1966 1825741 - 1825723 - f 81 -7.3 -4.62069 | opp_overlap 1825718 1825723, overlap 1825725 TTCTGATGCTAAAAA GGCCCGG TTTTT CCGGGTC TTTTATTGTGCCCAG TERM 1967 1825779 - 1825761 - f 100 -16 -4.37092 | opp_overlap 1825761 ATTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC TERM 1968 1825761 - 1825779 + F 100 -16 -3.07307 | opp_overlap 1825761 ATTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC tnp 1825892 - 1826350 + | transposase for the IS1541 insertion element TERM 1969 1826428 - 1826452 + F 100 -9.9 -4.50761 | opp_overlap 1826431, overlap 1826430 1826431 ATAGGCGCATATGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTTAAATTCAT TERM 1970 1826430 - 1826450 + F 100 -12.5 -3.8535 | opp_overlap 1826431, overlap 1826428 1826431 AGGCGCATATGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTTAAATTC TERM 1971 1826449 - 1826431 - f 100 -16 -4.8048 | opp_overlap 1826430 1826428 1826431 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTAAATT TERM 1972 1826431 - 1826449 + F 100 -16 -2.90126 | opp_overlap 1826431, overlap 1826430 1826428 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTAAATT pabC 1826766 - 1827572 + | 4-amino-4-deoxychorismate lyase TERM 1973 1827684 - 1827710 + F 72 -10.1 -2.89563 | gap 1, opp_overlap 1827673, overlap 1827679 1827685 ACATCCATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCTCTGTC TERM 1974 1827685 - 1827711 + F 84 -10.1 -3.8381 | gap 1, opp_overlap 1827673, overlap 1827679 1827684 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCTCTGTCT yceG 1827861 - 1828886 + | hypothetical protein TERM 1975 1828959 - 1828925 - g 74 -7.8 -4.18762 | gap 1, overlap 1828928 AAGGGGCAGGGAAAA CCACCAC-CCGCGAC ACCGTG GTCGCGGTGCTGCGG GCCCAAGGGATTAAC tdk 1828876 - 1829514 + | thymidylate kinase TERM 1976 1829966 - 1829987 + G 71 -6.6 -4.20491 | gap 1, overlap 1829968 1829976 CCAACCCGCCAGCTT GCTGGCTAC ACTGC GTAGCC-GC TGTTTTTATTGGTAT TERM 1977 1829976 - 1829989 + G 78 -3.7 -5.17744 | overlap 1829968 1829966 AGCTTGCTGGCTACA CTGCG TAGC CGCTG TTTTTATTGGTATCT TERM 1978 1830129 - 1830172 + G 71 -7.3 -4.03413 | opp_overlap 1830114 1830152, overlap 1830120 GGCGCACCGCTGGCG GCTGAGCGGTTGCTCCAAC CAGAGC GTTGGAGTATCCGCAGCGC TTTGTGTAGCGGGCT holB 1829514 - 1830536 + | DNA polymerase III subunit delta' YPO1607 1830551 - 1831360 + | putative metallodependent hydrolase TERM 1979 1831462 - 1831488 + F 73 -7.3 -4.15044 | opp_overlap 1831462 1831465 GTTTCTTTACGTAAA GTACGAAATCC GAGAG GGATTACGTGC TTTCTTGAAAGAAAC ptsG 1831666 - 1833099 + | glucose-specific PTS system IIBC components TERM 1980 1833139 - 1833122 - f 100 -12.7 -4.35116 | opp_overlap 1833122 TAGGGGAGAGCAAAA GGGAGGC GAAA GCCTCCC TTTATTGTGCCCAGA TERM 1981 1833122 - 1833139 + F 100 -12.7 -4.30719 | opp_overlap 1833122 TAGGGGAGAGCAAAA GGGAGGC GAAA GCCTCCC TTTATTGTGCCCAGA TERM 1982 1833176 - 1833158 - f 100 -16 -4.37092 | opp_overlap 1833158 1833164 ATTGTGCCCAGAAAA CCCCCAGC TAT GCTGGGGG TTCAGTAAAGCTTTC TERM 1983 1833158 - 1833176 + F 100 -16 -3.07307 | opp_overlap 1833158, overlap 1833164 ATTGTGCCCAGAAAA CCCCCAGC TAT GCTGGGGG TTCAGTAAAGCTTTC tnp 1833289 - 1833747 + | transposase for the IS1541 insertion element TERM 1984 1833821 - 1833853 + F 100 -11.3 -4.42806 | opp_overlap 1833828, overlap 1833825 1833827 1833828 CCTTATAGGCGCATA TGAAAAACCTCCGGC TAT GCCGGAGGATATTTA TTTATTTCAAACTAA TERM 1985 1833825 - 1833849 + F 100 -9.9 -4.78326 | opp_overlap 1833828, overlap 1833821 1833827 1833828 ATAGGCGCATATGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTTATTTCAAA TERM 1986 1833827 - 1833847 + F 100 -12.5 -3.99693 | opp_overlap 1833828, overlap 1833825 1833821 1833828 AGGCGCATATGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTTATTTCA TERM 1987 1833846 - 1833828 - f 100 -16 -4.8048 | opp_overlap 1833827 1833825 1833821 1833828 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTATTTC TERM 1988 1833828 - 1833846 + F 100 -16 -2.98189 | opp_overlap 1833828, overlap 1833827 1833825 1833821 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTATTTC aroE 1834190 - 1835008 + | shikimate 5-dehydrogenase YPO1611 1835182 - 1835535 + | purine nucleoside phosphoramidase TERM 1989 1835923 - 1835946 + G 70 -2.4 -4.96501 | gap 1, overlap 1835924 1835927 1835928 AATTAACAATAATTT TA-ATGCGCGC AGT GCGCGTCTCTA TTTATTTTTATAACG TERM 1990 1835928 - 1835940 + G 75 -10.5 -3.34428 | overlap 1835927 1835924 1835923 ACAATAATTTTAATG CGCGC AGT GCGCG TCTCTATTTATTTTT ycfL 1835570 - 1835959 + | putative lipoprotein YPO1613 1836000 - 1836575 + | putative lipoprotein TERM 1991 1836633 - 1836605 - f 71 -8.2 -3.55084 | gap 1, opp_overlap 1836606 1836610 1836611, overlap 1836603 1836606 CCTTAATAGCAAACA TCAATCCGGCGGT GAAA ACCGCCG-ATTGT CATATTAGCCCGGTA TERM 1992 1836632 - 1836606 - f 80 -11.7 -2.72568 | gap 1, opp_overlap 1836606 1836610 1836611, overlap 1836605 1836603 CTTAATAGCAAACAT CAATCCGGCGGT GAAA ACCGCCG-ATTG TCATATTAGCCCGGT TERM 1993 1836606 - 1836632 + F 81 -11.7 -2.73994 | gap 1, opp_overlap 1836606 1836605 1836603, overlap 1836610 1836611 CTTAATAGCAAACAT CAATCCGGCGGT GAAA ACCGCCG-ATTG TCATATTAGCCCGGT TERM 1994 1836610 - 1836629 + F 76 -9.2 -3.52073 | opp_overlap 1836606 1836605 1836603, overlap 1836606 1836611 ATAGCAAACATCAAT CCGGCGGT GAAA ACCGCCGA TTGTCATATTAGCCC TERM 1995 1836611 - 1836628 + F 88 -12.7 -2.70923 | opp_overlap 1836606 1836605 1836603, overlap 1836610 1836606 TAGCAAACATCAATC CGGCGGT GAAA ACCGCCG ATTGTCATATTAGCC TERM 1996 1836748 - 1836728 - g 76 -7.6 -4.37658 | AATCGCCGCACAAAA GTCAGTTG GGGGT CAACCGAC GACGTGAGCGTAAAT TERM 1997 1837391 - 1837403 + G 82 -7.7 -4.68919 | TGGCATGGGCCGCGC CGTTG CGC CAACG TTTTAATTTGTCTTT YPO1614 1836616 - 1837422 + | hypothetical protein ycfO 1837493 - 1838524 + | beta-hexosaminidase YPO1616 1838652 - 1839194 + | hypothetical protein TERM 1998 1839861 - 1839849 - g 82 -7.7 -4.6313 | opp_overlap 1839848 GTGAAAACAAAACAA TCAGC CTG GCTGA GATTTGTGATGAACA ndh 1839569 - 1840873 + | NADH dehydrogenase TERM 1999 1840997 - 1840976 - f 95 -13.1 -3.15663 | overlap 1840960 ACTCATCGGGATTAA TGAGCCTCA TTCG TGAGGCTCA CCCTGCGGGCTAGCA YPO1618 1841044 - 1841238 + | hypothetical protein YPO1619 1841411 - 1841980 + | hypothetical protein YPO1620 1841988 - 1842401 + | hypothetical protein TERM 2000 1843679 - 1843700 + G 77 -10.1 -3.74693 | TTTATTATCGAGTTC GGTGACCGC CTGA GCGATCACC TTTAATACGGTGGCA y1062 1842497 - 1843705 + | transposase for the IS285 insertion element TERM 2001 1843906 - 1843888 - T 70 -7.3 -3.85698 | CCCTGTGTTTACAAA CGGCGAG TCACG CACGCCG TATCCCGGTATTTTA YPO1622 1844871 - 1844089 - | transposase/IS protein TERM 2002 1844787 - 1844801 + g 77 -11.4 -3.3506 | overlap 1844800 CTGCCTGTTGTGACA GCGCAG GCG CTGCGC TTATAAGGCTTTCCA y1093 1845890 - 1844868 - | transposase for insertion sequence IS100 TERM 2003 1845912 - 1845894 - H 100 -13.2 -4.01078 | AAAAGTGACCATAAA CTCTCCTG AAT CAGGAGAG CAGATTACCCCCTGG TERM 2004 1846523 - 1846504 - g 70 -2.8 -4.87665 | CCCCATTGATAAAAA TGGTCAAC TGGT GCTGAACA ACCGAGCGTAATACC ycfJ 1845995 - 1846534 + | hypothetical protein mfd 1850219 - 1846773 - | transcription-repair coupling factor TERM 2005 1848244 - 1848266 + g 71 -6.3 -4.34486 | gap 1, overlap 1848243 1848240 TGTTGAGCCAGCAGG GTGGTGG-GT ACCA ACACCGCCAC TTGTTTATTATTGGT TERM 2006 1850544 - 1850560 + G 90 -10.1 -4.5123 | TGCGTGGGCGTGCTT CTGACCG CTT CGGTCGG TTTGTTTCGTGGCTT TERM 2007 1850963 - 1850979 + G 77 -10.1 -3.78775 | opp_overlap 1850963 CAGCTCGGGGTTAAA CGCGGTG AAA CACTGCG TTTGATGGTACCGAG lolC 1850489 - 1851691 + | outer membrane-specific lipoprotein transporter subunit LolC lolD 1851684 - 1852388 + | lipoprotein transporter ATP-binding subunit TERM 2008 1852950 - 1852964 + G 70 -4.2 -4.62783 | CTAAGCGCATCCGTT TACAGG TTG CCGGTA TTTTTCAACTGAGTG lolE 1852385 - 1853635 + | outer membrane-specific lipoprotein transporter subunit LolE TERM 2009 1854021 - 1854053 + G 70 -9.8 -3.2327 | opp_overlap 1854024, overlap 1854018 1854024 1854041 AGTTTCGCACTTACC CAACGGTGCTGGGG CTTAT TCTCGGCACCGGTG TTGGTGGTGGGTTAA YPO1629 1853654 - 1854424 + | N-acetyl-D-glucosamine kinase TERM 2010 1854581 - 1854567 - f 85 -7.2 -4.83615 | CATTTGGCAGAAAAA TAATCG TCA CGATTA ATAACAAGACAGATA cobB 1854618 - 1855454 + | NAD-dependent deacetylase TERM 2011 1856197 - 1856187 - g 71 -6.8 -4.14739 | CGACTGATGGTAAAA CCCT GTT AGGG GCGGATGATAAAGCG pepT 1855784 - 1857019 + | peptidase T TERM 2012 1857039 - 1857055 + T 84 -10.8 -3.72051 | opp_overlap 1857039 AACGATAGAGAGAAA CGCCCC GAAAA GGGGCG TTTGAGGTTATTGAC TERM 2013 1857055 - 1857039 - T 93 -10.8 -4.1897 | opp_overlap 1857039 AACGATAGAGAGAAA CGCCCC GAAAA GGGGCG TTTGAGGTTATTGAC YPO1632 1858373 - 1857252 - | hypothetical protein phoQ 1859911 - 1858457 - | sensor protein PhoQ TERM 2014 1859066 - 1859079 + g 76 -8.1 -4.13014 | TAGTGTGGTTTGTAG CACCG CCAG CGGTG TTTTAAGGCTGTGAG phoP 1860588 - 1859917 - | DNA-binding transcriptional regulator PhoP YPO1635 1861422 - 1860799 - | putative lipoprotein TERM 2015 1861256 - 1861276 + g 74 -6.9 -4.42386 | ATCCCACCCATATTT TTATTGCCA ATA TGGCTATAA TTTTGTCGGTCAAAC TERM 2016 1861598 - 1861553 - R 100 -13 -3.34192 | gap 1, opp_overlap 1861556 1861558, overlap 1861556 AAGGGGGGGAAGGAA TAATACAGATGGCGTTAGCTT TTACC AAACTAA-GCCACCTGTATTA GATAAAGAATATTAC TERM 2017 1861595 - 1861556 - R 86 -10.3 -3.81146 | gap 1, opp_overlap 1861556 1861558, overlap 1861553 GGGGGGAAGGAATAA TACAGATGGCGTTAGCTT TTACC AAACTAA-GCCACCTGTA TTAGATAAAGAATAT purB 1862980 - 1861610 - | adenylosuccinate lyase YPO1637 1863667 - 1863041 - | hypothetical protein trmU 1864840 - 1863725 - | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TERM 2018 1864406 - 1864422 + g 71 -6.5 -4.13945 | opp_overlap 1864405 TTTATTTCCATCAAG GCCGC GCAGTAG GCGGC TTTTACCATCAACAT TERM 2019 1864790 - 1864816 + g 82 -3.5 -5.30686 | opp_overlap 1864787, overlap 1864792 GGAAACGGAAGAGTC GACACCGCCGG ACATG CCGACGATGAC TTTTTTCTGGCTATT YPO1639 1865473 - 1865027 - | hypothetical protein TERM 2020 1865369 - 1865386 + g 70 -2.6 -5.00339 | overlap 1865370 GGCTTCCAGATGACC GGCTGG CTGGTT CCAGCG TTTTTCATTGTTGAT ymfC 1866092 - 1865466 - | putative pseudouridine synthase TERM 2021 1866020 - 1866002 - G 74 -9.5 -3.57389 | overlap 1866000 TATTGAATAACAATA CCCGCCG TGGCG CAGCGGG GGGGGACTGCCTGGC TERM 2022 1866149 - 1866127 - H 83 -12 -2.80113 | GATTAGCGCATTATA CCCCAATCCG TTT CGGATTGGCG CGGAACGAATATTCA icdA 1866223 - 1867476 + | isocitrate dehydrogenase TERM 2023 1867488 - 1867529 + T 100 -14.7 -3.54 | opp_overlap 1867495, overlap 1867489 1867491 1867495 GTAGTTCTGACGTAT CTATAAACTTCACGAGGGC TTAT GCTTTCGTGAAGTTTATAC TATTTATGGCGTGCT TERM 2024 1867489 - 1867528 + T 100 -18.2 -2.71918 | opp_overlap 1867495, overlap 1867488 1867491 1867495 TAGTTCTGACGTATC TATAAACTTCACGAGGGC TTAT GCTTTCGTGAAGTTTATA CTATTTATGGCGTGC TERM 2025 1867491 - 1867526 + T 100 -16.4 -2.90065 | opp_overlap 1867495, overlap 1867489 1867488 1867495 GTTCTGACGTATCTA TAAACTTCACGAGGGC TTAT GCTTTCGTGAAGTTTA TACTATTTATGGCGT TERM 2026 1867495 - 1867522 + T 100 -12.8 -4.12037 | opp_overlap 1867495, overlap 1867491 1867489 1867488 TGACGTATCTATAAA CTTCACGAGGGC TTAT GCTTTCGTGAAG TTTATACTATTTATG TERM 2027 1867522 - 1867495 - T 77 -8.4 -3.92869 | opp_overlap 1867495 1867491 1867489 1867488 TGACGTATCTATAAA CTTCACGAGGGC TTAT GCTTTCGTGAAG TTTATACTATTTATG cscR 1868665 - 1867622 - | sucrose operon repressor LacI-family TERM 2028 1868391 - 1868381 - G 79 -6.8 -4.72986 | TAGGTTCACTAAAAA GCTG TTC CAGC CAAACTCTCGGGCAG TERM 2029 1868887 - 1868868 - R 79 -7.8 -4.3129 | overlap 1868869 CAGGCAGCAGTAAAA CGCCCTCA ATAT TGAGGGCT GAATGTATTGAGGAA TERM 2030 1868886 - 1868869 - R 84 -11.3 -3.18292 | overlap 1868868 AGGCAGCAGTAAAAC GCCCTCA ATAT TGAGGGC TGAATGTATTGAGGA YPO1643 1869201 - 1868941 - | hypothetical protein aer 1870901 - 1869321 - | putative methyl-accepting chemotaxis protein YPO1645 1872678 - 1871821 - | hypothetical protein YPO1646 1872838 - 1873221 + | hypothetical protein TERM 2031 1874470 - 1874452 - g 82 -8.1 -4.51847 | opp_overlap 1874457, overlap 1874443 AAAGAAGGGACAAAA GTGACCC TCAGT GGGCCAC TGGCGTTATCATCGA YPO1648 1873753 - 1875078 + | phosphoanhydride phosphorylase TERM 2032 1875255 - 1875220 - T 91 -5.5 -5.60993 | gap 2 GCTGTCATAAAAAAA GCCGGG--TGGCCCA ATAAAAGG TAGGCCAGACCCGGC AAATAAATACCGGCA YPO1649 1875595 - 1875380 - | hypothetical protein YPO1650 1876788 - 1875886 - | hypothetical protein YPO1651 1877326 - 1876877 - | AsnC-family transcriptional regulatory protein TERM 2033 1877039 - 1877028 - G 70 -2.2 -5.03747 | AAACGGCTCAAAAAA CAGT CATC ACCG GTTATTTTGTCACAC ylaC 1878350 - 1877817 - | hypothetical protein TERM 2034 1878488 - 1878508 + r 76 -9.7 -3.37879 | opp_overlap 1878505, overlap 1878506 ACCCTTTATACCCGT CGCCCTTCA AGA TGAAGGGGG TTAGTTGCCCTTGCT YPO1653 1879643 - 1878633 - | probable Zinc-binding dehydrogenase TERM 2035 1879780 - 1879768 - R 71 -2 -5.15969 | GTGTAATGGAAAAAA TTCA TAGAG TGAA CGTGCGTAACTATCA TERM 2036 1879864 - 1879846 - R 100 -11 -5.9003 | opp_overlap 1879845 AAAGGAACAAAAAAA GCGCCCAT AGG ATGAGCGC GTAAATTTTGCAAAG lacZ 1883232 - 1880050 - | beta-D-galactosidase TERM 2037 1881508 - 1881490 - G 89 -10.2 -4.42806 | CCAGTCCCAAATAAA CCCGCCCT GTA AGCGCGGG TACTGACGAAATGCC TERM 2038 1883437 - 1883422 - H 70 -2.5 -5.07567 | TGAGAGGCCAAAAAA CGCAG GGCGCA CTACG AAGAGATAACAATTT cspC 1883773 - 1883985 + | cold shock protein TERM 2039 1884012 - 1884025 + F 100 -9.5 -5.25893 | opp_overlap 1884012 CTGATTATAAAAAAA CCCGC TAAG GCGGG TTTTTTACTGTCTGT TERM 2040 1884025 - 1884012 - f 100 -9.5 -5.67063 | opp_overlap 1884012 CTGATTATAAAAAAA CCCGC TAAG GCGGG TTTTTTACTGTCTGT YPO1656 1884200 - 1884391 + | hypothetical protein TERM 2041 1884442 - 1884471 + F 95 -8 -5.2197 | gap 2, opp_overlap 1884442 TATTGCGATAAAAAA CCGGAGG--AAGGT TCAT ACCTTATCCTCCGG TTTTTGCTTTTTATC TERM 2042 1884471 - 1884442 - f 100 -8 -5.252 | gap 2, opp_overlap 1884442 TATTGCGATAAAAAA CCGGAGG--AAGGT TCAT ACCTTATCCTCCGG TTTTTGCTTTTTATC TERM 2043 1885294 - 1885323 + F 76 -7.9 -4.1822 | gap 1, overlap 1885295 CATTCTGTTTCACGG TTGCGGTCAGT-TG CTC CATGCTGGCCGCAG TTTGTTCAAGTGAAG TERM 2044 1885295 - 1885322 + F 72 -9.2 -3.10611 | gap 1, overlap 1885294 ATTCTGTTTCACGGT TGCGGTCAGT-TG CTC CATGCTGGCCGCA GTTTGTTCAAGTGAA TERM 2045 1885957 - 1885970 + F 77 -4.5 -5.055 | GCTGTGACTGAGCTA TGCGG CCTT CTGCA TTTTTTAGGCCTTGC YPO1659 1886912 - 1887082 + | hypothetical protein mgtC 1887422 - 1888132 + | Mg(2+) transport ATPase protein C TERM 2046 1889575 - 1889556 - g 71 -7.8 -4.11484 | opp_overlap 1889574, overlap 1889557 TCTAATCTGGCAAAA GGGGCCAT CGCG ATGGCCCG GCGTAAAGTCGTGGT TERM 2047 1889574 - 1889557 - g 74 -11.3 -3.06569 | overlap 1889556 CTAATCTGGCAAAAG GGGCCAT CGCG ATGGCCC GGCGTAAAGTCGTGG mgtB 1888533 - 1891232 + | Mg(2+) transport ATPase protein B TERM 2048 1891266 - 1891306 + F 71 -9.1 -3.36569 | opp_overlap 1891270 1891272, overlap 1891264 1891268 1891270 AGCCTGGTTGATCTC AAGACACTATTCCGGGG GTGGCTG CCCTGGAATAGTGTGTG TATTTAAAAGATTAG TERM 2049 1891268 - 1891304 + F 86 -11.7 -3.24976 | opp_overlap 1891270 1891272, overlap 1891266 1891264 1891270 CCTGGTTGATCTCAA GACACTATTCCGGGG GTGGCTG CCCTGGAATAGTGTG TGTATTTAAAAGATT TERM 2050 1891302 - 1891270 - f 86 -12.1 -3.05844 | opp_overlap 1891268 1891266 1891264 1891270, overlap 1891272 TGGTTGATCTCAAGA CACTATTCCGGGG GTGGCTG CCCTGGAATAGTG TGTGTATTTAAAAGA TERM 2051 1891270 - 1891302 + F 100 -14.3 -3.18571 | opp_overlap 1891270 1891272, overlap 1891268 1891266 1891264 TGGTTGATCTCAAGA CACTATTCCGGGG GTGGCTG CCCTGGAATAGTG TGTGTATTTAAAAGA TERM 2052 1892358 - 1892382 + F 78 -7.3 -4.45168 | GAAGGATCCCTGGTT TTGAGTGATAA ATT TTGTCATTCAA TTTATGTTTTAAAAC flhC 1892772 - 1893356 + | transcriptional activator FlhC TERM 2053 1894284 - 1894270 - g 79 -8.6 -4.40993 | CAGAAACGACCAAAA TGATGC AAT GCATCA AAGTGACTCTGCTGT motA 1893561 - 1894448 + | flagellar motor protein MotA TERM 2054 1895022 - 1895000 - g 73 -11.4 -3.00476 | overlap 1895005 ATCCTGAATGACATA CCGAATAAAC TCA GTTTATCCGG TCACACCGATGACCT TERM 2055 1895325 - 1895303 - g 70 -2.6 -5.03994 | opp_overlap 1895308, overlap 1895304 CTGGATATAGAAAAA GCAACCGGCT TAA AGCAGATTGA TACTCACGGGACGGT motB 1894445 - 1895728 + | flagellar motor protein MotB TERM 2056 1895758 - 1895771 + G 76 -3.1 -5.14563 | GCATGGATATTACCG CGTTT TATC AGACG TTTTTTGATGAAGCA TERM 2057 1896281 - 1896261 - g 71 -11.1 -2.7535 | opp_overlap 1896258 1896254, overlap 1896258 GCTGGCAACACATCA CCCGCGTTG CTT CAAGGCGGG ATGCGTATTCGTTTG TERM 2058 1897599 - 1897635 + G 74 -10.1 -3.55084 | overlap 1897583 1897597 CGCGTGCTGCAAGTT CGCGGTGAATTTCTACC ATT GGTTGAATTGTACCGCG TCTTTGATGTTAAAA cheA 1895739 - 1897910 + | chemotaxis protein CheA TERM 2059 1898530 - 1898520 - g 79 -6.8 -4.70659 | GTTGATATCGAAAAA CTGC TGA GCAG TGAAGAGATGTCGTT cheW 1898073 - 1898570 + | purine-binding chemotaxis protein TERM 2060 1898794 - 1898824 + T 81 -9.6 -3.87075 | opp_overlap 1898793 1898792 1898794 1898797, overlap 1898797 CTGAAATAAAGAACT GAACCGCCATTGCA TAT TGCTCGGGCGGTTC TTTATGACAAGTCAT yihN 1900097 - 1898862 - | hypothetical protein TERM 2061 1899655 - 1899645 - G 70 -2.4 -5.05606 | CTGAACAAAAACAAA CAGG GCA CCAG AAGCGATAAGTACAT YPO1669 1900487 - 1900110 - | YjgF-family lipoprotein YPO1670 1901470 - 1900484 - | hypothetical protein TERM 2062 1901190 - 1901170 - G 82 -11.9 -3.62597 | opp_overlap 1901180 1901184 TGTAGGTTCGAATAA CATCCGCAC CCA GTGCAGATG CAAATTGCACGGCTT YPO1671 1901648 - 1902325 + | putative DNA-binding protein TERM 2063 1902403 - 1902383 - f 89 -12.7 -2.73875 | overlap 1902380 GTTGGCCGAATAGTA TCGCCATAA ATT TTATGGCGA AGTAACATTAATATG TERM 2064 1905382 - 1905362 - g 70 -11.1 -2.50816 | overlap 1905361 CGGTTAGTGATCAAC GGCGATGCC ACC GGCACCACC TCGGTCCGGGTGAAC YPO1672 1902800 - 1906606 + | hypothetical protein TERM 2065 1908927 - 1908952 + G 73 -5.4 -4.70319 | gap 1 TTTCAGCCAGGTTAC GCTAACCCTGC TGCTC GC-GGGTCAGC TTTTAGTTTTGGTAC YPO1673 1907134 - 1910010 + | putative integral membrane protein TERM 2066 1910602 - 1910592 - g 76 -6.8 -4.55689 | ACTATTCACAGAAAA GGTG CTA CACC GGCCGATATCTTCCG YPO1674 1910079 - 1910780 + | hypothetical protein TERM 2067 1911044 - 1911062 + G 70 -8.9 -3.51158 | GCGTATGAAAGTGGT TACCAGC CTGCT GCTGGTA TTAGTATTATTTGGT TERM 2068 1911421 - 1911393 - g 70 -2.5 -5.03145 | opp_overlap 1911402, overlap 1911394 GAAGGCGCCAAAAAA TTAAAACAGTCCT ACG AGGAATATTTTAG TGCCTTAACCGAACT TERM 2069 1911998 - 1911986 - g 71 -6.9 -4.16251 | overlap 1911977 ACAGAACGCTGAAAA CGCCC GTC AGGCG AGTCAATTAGCATTG cheD 1911021 - 1912694 + | methyl-accepting chemotaxis protein TERM 2070 1914575 - 1914543 - f 76 -10.7 -2.60808 | overlap 1914539 AGGAGTGACAATCGA TCATCACTCGTAACG GGT CATCACGAGTAACGA CAAGTGGCTGTAAAG TERM 2071 1915385 - 1915409 + G 73 -6.4 -4.51799 | opp_overlap 1915386, overlap 1915386 TCTATTTTGATAAAG AGACGCAGGA ACGCA TTCTGCGTCG TTTTGTACCTTTGCT TERM 2072 1915386 - 1915408 + G 70 -9.9 -3.29995 | opp_overlap 1915386, overlap 1915385 CTATTTTGATAAAGA GACGCAGGA ACGCA TTCTGCGTC GTTTTGTACCTTTGC cheR 1914661 - 1915533 + | chemotaxis methyltransferase CheR TERM 2073 1916295 - 1916316 + G 71 -6.6 -4.25859 | gap 1, overlap 1916287 GGACCCGCGGTTAAT CGTC-ACCG TCCTT CGGTTGACG TTCTTTTCCGTTCGG cheB 1915533 - 1916582 + | chemotaxis-specific methylesterase cheY 1916683 - 1917072 + | chemotaxis regulatory protein CheY cheZ 1917082 - 1917726 + | chemotaxis regulator CheZ TERM 2074 1917742 - 1917777 + T 74 -4.6 -4.81685 | overlap 1917748 TGACGTTATCGATAG CGCTAACCGGTAGGGA ATTG TCCCTGCCGGTTTATA TTTTTCATACTTCAT TERM 2075 1917748 - 1917771 + T 100 -14.6 -4.58297 | overlap 1917742 TATCGATAGCGCTAA CCGGTAGGGA ATTG TCCCTGCCGG TTTATATTTTTCATA YPO1682 1918159 - 1918040 - | hypothetical protein TERM 2076 1918210 - 1918224 + H 71 -10 -2.63257 | overlap 1918204 AAATATTGATGCGGC GCACAC ATT GTGTGC TGGATTATATACAGT YPO1683 1918291 - 1919055 + | probable N-acetylmuramoyl-L-alanine amidase TERM 2077 1919709 - 1919723 + F 72 -7.8 -3.85817 | GGAAAAGGTGGGATC GCTGGG AAG CCTAGC TTTATCGCCACCCCT TERM 2078 1919911 - 1919925 + F 84 -11.4 -3.1506 | CGATTTCATCGACCT CCACCG ATG CGGTGG TTGGTAGCCAGCTTT TERM 2079 1920013 - 1919990 - f 72 -9.6 -3.09933 | gap 1 CGCCAACTCAGTGAA CCCGCAAG-AC TCC GTGCCTGCGGG TCAGGATGCTATTGC TERM 2080 1920379 - 1920393 + F 80 -11.4 -2.68719 | opp_overlap 1920370, overlap 1920378 1920381 AGATCACCGGTGTGG CAGCCG GTT CGGCTG ATTATGATGTGGTCA TERM 2081 1920856 - 1920870 + F 80 -11.4 -2.64747 | opp_overlap 1920847, overlap 1920855 1920858 AGATCACCGGTGTGG CAGCCG GTT CGGCTG ATTATGATGCGGTCA TERM 2082 1922081 - 1922110 + F 84 -10.7 -3.61089 | opp_overlap 1922082, overlap 1922082 GTTTAATAATCATTA ACGGGTTGTGCGA TTTT TTGCACAGCCCGA TTCTACTTCTTAGGG TERM 2083 1922109 - 1922082 - f 76 -9.8 -3.33171 | opp_overlap 1922082 1922081 TTTAATAATCATTAA CGGGTTGTGCGA TTTT TTGCACAGCCCG ATTCTACTTCTTAGG TERM 2084 1922082 - 1922109 + F 95 -14.2 -2.76171 | opp_overlap 1922082, overlap 1922081 TTTAATAATCATTAA CGGGTTGTGCGA TTTT TTGCACAGCCCG ATTCTACTTCTTAGG YPO1686 1922143 - 1923096 + | hypothetical protein alr 1924944 - 1923715 - | alanine racemase YPO1688 1926119 - 1926367 + | hypothetical protein TERM 2085 1926507 - 1926533 + F 72 -7.2 -3.9749 | gap 1, overlap 1926506 CATCCCTGGGGGCTC GAG-CCGCGCC CTCCCT GGCGCGGACGC TTTACTCTTCTGCCT TERM 2086 1927896 - 1927882 - g 76 -11.4 -3.19522 | opp_overlap 1927881 1927880 CCAGTCAAGATGGAA CGCCTG TAT CAGGCG GGTTATGCCGAAGGA YPO1689 1926760 - 1928016 + | putative lipoprotein TERM 2087 1928284 - 1928258 - g 84 -2.2 -5.60993 | opp_overlap 1928258 TCCTCGATAAAAAAA GTGTTCAGCG ATAGCTA CTCGGAACAC TCTTTCGATGAATGG YPO1690 1928171 - 1928404 + | hypothetical protein YPO1691 1929721 - 1928939 - | transposase/IS protein TERM 2088 1929637 - 1929651 + g 77 -11.4 -3.3506 | overlap 1929650 CTGCCTGTTGTGACA GCGCAG GCG CTGCGC TTATAAGGCTTTCCA y1093 1930740 - 1929718 - | transposase for insertion sequence IS100 TERM 2089 1930762 - 1930744 - H 100 -13.2 -4.01078 | AAAAGTGACCATAAA CTCTCCTG AAT CAGGAGAG CAGACTACCCCCTGG YPO1693 1931147 - 1931536 + | hypothetical protein YPO1694 1931885 - 1931646 - | hypothetical protein YPO1695 1933082 - 1932093 - | hypothetical protein YPO1696 1935735 - 1933288 - | probable outer membrane usher protein YPO1697 1936675 - 1935923 - | putative chaperone protein YPO1698 1937263 - 1936706 - | hypothetical protein YPO1699 1937814 - 1937284 - | hypothetical protein YPO1700 1938374 - 1937820 - | hypothetical protein TERM 2090 1938146 - 1938130 - G 74 -6.5 -4.29304 | opp_overlap 1938135 1938136, overlap 1938126 GCACTACAATACAAA CTGAGAG TCC CGCTCAG TGTGCCACTGAATGC YPO1701 1941504 - 1938853 - | hypothetical protein TERM 2091 1939593 - 1939607 + gr 77 -8.5 -3.98282 | overlap 1939594 TAATCTGGCTACCCA CGGCC CGTGC GGCCG TTTCATTACTATACA TERM 2092 1941025 - 1941044 + gr 72 -10 -2.76671 | opp_overlap 1941025, overlap 1941024 GAGATGAATCATTAA TTCGCCTG TATT CAGGCGGA ATTTAGGCTGAGTAT yebS 1942825 - 1941473 - | hypothetical protein TERM 2093 1942547 - 1942532 - GH 71 -9 -3.39449 | CGGTATTAACAGCAA CATGGC GCAA GCCATG GCGGTCAACCGGGTC TERM 2094 1942880 - 1942861 - H 81 -10.8 -3.34936 | opp_overlap 1942861 1942871 AACATTACAGAGGAA TACCCTTG TCGC CAAGGGTA TTTAATGATTATTTT TERM 2095 1942861 - 1942880 + H 90 -10.8 -3.91642 | opp_overlap 1942861, overlap 1942871 AACATTACAGAGGAA TACCCTTG TCGC CAAGGGTA TTTAATGATTATTTT TERM 2096 1943212 - 1943200 - g 73 -6.2 -4.4891 | CGCAGTAGCAGAAAA CCGC GTTCA GCGG GTAGGTAATGTGCAT YPO1703 1942952 - 1943449 + | hypothetical protein TERM 2097 1943477 - 1943496 + F 86 -12.2 -3.1552 | overlap 1943475 GTGGCAATTGCTGAT GGCGTCAT TATA ATGACGCC TGTTCATGCCTGCGC TERM 2098 1943601 - 1943611 + G 79 -8.2 -4.41348 | AGCCTTTTTGGCCGA GCGG TTC CCGC TTTGTTTCACCGCCG TERM 2099 1943723 - 1943702 - g 73 -10.9 -3.29147 | GGGAAGAGAATTTAA GCAAAACGC AATT GCGTTCTGC GCTGCGTCTCTACAC TERM 2100 1944001 - 1943974 - g 76 -2.7 -5.08824 | overlap 1943975 CCGGCAGGTAAAAAA CCTGCA-CCGCGT CGTG AAGCGGGTGC-GG CTCCGGAAAACCGCA proQ 1943545 - 1944258 + | putative solute/DNA competence effector prc 1944278 - 1946350 + | carboxy-terminal protease TERM 2101 1946372 - 1946393 + F 100 -8.7 -6.31682 | opp_overlap 1946372 AAATAATATGAAGAA TCCGGGTCT TATT GGACTCGGA TTTTTTTTTGCTTTT htpX 1946824 - 1947705 + | heat shock protein HtpX TERM 2102 1947783 - 1947811 + F 100 -13.2 -5.44119 | ATAATATGGTCTTCA CACCCTGTGAGC GGTAA GCTGACAGGGTG TTTTTTTACCGTGGC TERM 2103 1947972 - 1947987 + F 100 -4.8 -5.9362 | AAATCTGTGACTTAC TTCATT GAAA AATGAA TTTTTTTGTCTTTTC YPO1707 1948363 - 1948905 + | putative fimbrial protein TERM 2104 1949026 - 1949008 - f 100 -10.3 -4.386 | opp_overlap 1949007 1949006 CAATCCGGCATAAAA TGGGAGC TTAGT GCTCCCA GCTTTATAAGTTCGA ecpD 1949058 - 1949837 + | putative chaperone protein TERM 2105 1949835 - 1949886 + F 72 -10 -2.84999 | opp_overlap 1949835 1949850, overlap 1949850 CAAAAACTGACCCAA TAAAACTATAAAAAATACAAATTA AGGG TAATTTGTATTTTTTGCACTTTTA TATACTGCATTTAAT TERM 2106 1949886 - 1949835 - f 74 -10 -3.14261 | opp_overlap 1949835 1949850, overlap 1949850 CAAAAACTGACCCAA TAAAACTATAAAAAATACAAATTA AGGG TAATTTGTATTTTTTGCACTTTTA TATACTGCATTTAAT TERM 2107 1949850 - 1949871 + F 90 -7.5 -5.15117 | opp_overlap 1949835 1949850, overlap 1949835 TAAAACTATAAAAAA TACAAATTA AGGG TAATTTGTA TTTTTTGCACTTTTA TERM 2108 1949871 - 1949850 - f 95 -7.5 -5.4588 | opp_overlap 1949850 1949835, overlap 1949835 TAAAACTATAAAAAA TACAAATTA AGGG TAATTTGTA TTTTTTGCACTTTTA TERM 2109 1952215 - 1952205 - g 73 -5.4 -4.68994 | opp_overlap 1952208, overlap 1952207 AGTACTAGCCAAAAA GTTG CGC CAAC CGCAGGTGCTGTTGC htrE 1949919 - 1952531 + | putative outer membrane usher protein YPO1710 1952528 - 1953691 + | putative fimbrial protein YPO1711 1953688 - 1954491 + | putative chaperone protein YPO1712 1955912 - 1954545 - | putative transport protein TERM 2110 1955496 - 1955471 - G 84 -11.3 -3.81691 | overlap 1955491 AAGACACAGCAACAA TCAAGGTATTG ATAC CAATACCTCGA CCAAGTTGGGCTCGA ogl 1956239 - 1957405 + | oligogalacturonate lyase TERM 2111 1957418 - 1957444 + F 100 -12.4 -3.88498 | TAGCCGAGTTTTCCA TTAGCCTCTCTC TTA GAAAGAGGCTAA TTTGCTGTCTGCAAG kdgR 1957592 - 1958383 + | IclR-family transcriptional regulatory protein TERM 2112 1958506 - 1958486 - f 82 -6.8 -4.82901 | opp_overlap 1958486 CTCTTTTTATAAAAA CAGCTCCT CTGGC AGGGGCTG TTTTTCATCACATGA TERM 2113 1958486 - 1958506 + F 100 -9 -4.7373 | opp_overlap 1958486 CTCTTTTTATAAAAA CAGCTCCT CTGGC AGGGGCTG TTTTTCATCACATGA YPO1715 1958768 - 1959619 + | probable N-acetylmuramoyl-L-alanine amidase gltP 1961231 - 1959834 - | putative transport protein ydjM 1961977 - 1961429 - | hypothetical protein TERM 2114 1961619 - 1961580 - G 82 -11.2 -3.76641 | opp_overlap 1961577 AGCGGAATACTGAAA CGCCAGCGGCAGGGCCAC AATA GCGGCACACCGGCTGGCG TAATCATATCGGCCA TERM 2115 1962389 - 1962360 - R 100 -13.1 -5.53288 | gap 1, opp_overlap 1962367 1962367 GCTAAGCTAAAAAAA GGGAAAAG-TGACT GGG AGTCAACTTTTCCC CAAAATAATGCAGAG YPO1718 1963167 - 1962457 - | hypothetical protein TERM 2116 1963401 - 1963438 + r 71 -10 -2.57192 | opp_overlap 1963401 1963406, overlap 1963406 TTTTATTTGATTAAA CAAAATAACCCCACCA AATAAA TGGCAGGGTTATTTTG TGACTTAAGTTAAAT TERM 2117 1963438 - 1963401 - R 100 -14.4 -3.74693 | opp_overlap 1963401 1963406, overlap 1963406 TTTTATTTGATTAAA CAAAATAACCCCACCA AATAAA TGGCAGGGTTATTTTG TGACTTAAGTTAAAT TERM 2118 1963433 - 1963406 - R 100 -8.5 -4.93877 | opp_overlap 1963401 1963406, overlap 1963401 TTTGATTAAACAAAA TAACCCCACCA AATAAA TGGCAGGGTTA TTTTGTGACTTAAGT YPO1719 1964757 - 1963465 - | putative sugar-binding protein TERM 2119 1964218 - 1964229 + g 84 -4.4 -5.30616 | opp_overlap 1964210 1964218 TACAACAGGGTAATA TTGG TCAC CCAA TTTTTCTTTAAATAC YPO1720 1965900 - 1964773 - | putative sugar ABC transporter YPO1721 1966834 - 1965914 - | putative sugar ABC transporter (permease) YPO1722 1967717 - 1966827 - | putative ABC sugar transporter (permease) kdgC 1969425 - 1967758 - | exopolygalacturonate lyase TERM 2120 1969559 - 1969575 + r 91 -3.7 -5.83211 | AAAGTGTGATCGAAG TCGGAAC GTT GTTTTGA TTTTTTATTTTGGTG TERM 2121 1969673 - 1969654 - R 100 -12.2 -5.74288 | opp_overlap 1969651 ATAAATAATAAAAAA GGCACAAC CAAA GTTGTGCC TGATGCGTTTTTGAG kduD1 1970522 - 1969761 - | 2-deoxy-D-gluconate 3-dehydrogenase TERM 2122 1970369 - 1970349 - G 70 -4.6 -4.59773 | opp_overlap 1970349 1970357 GGTCAGGCTGAAAAA GCGACGGC CCAGT GCAGTCAC TTGTTCGATAGTCTC TERM 2123 1970582 - 1970598 + r 70 -7.2 -3.77196 | opp_overlap 1970582 TTATTGGAGGTGAAA GCCGCC GTAAA GGTGGC TTTAATAGGTGATAC kduI 1971450 - 1970614 - | 5-keto-4-deoxyuronate isomerase TERM 2124 1973366 - 1973387 + G 77 -10.1 -3.74693 | TTTATTATCGAGTTC GGTGACCGC CTGA GCGATCACC TTTAATACGGTGGCA y1062 1972184 - 1973392 + | transposase for the IS285 insertion element TERM 2125 1973655 - 1973670 + F 70 -7.6 -3.7108 | opp_overlap 1973650 1973655, overlap 1973655 1973662 CGGCATTAGAGTAGA TCCGAA ACGT TTCGGA TTTAAATCTAAACGT TERM 2126 1973691 - 1973655 - f 75 -10.4 -2.87468 | gap 1, opp_overlap 1973655 1973655 1973662, overlap 1973650 CGGCATTAGAGTAGA TCCGAAACGTTTCGGAT TTAA AT-CTAAACGTTTCGGA TGTGTGACGAACTTA TERM 2127 1973655 - 1973691 + F 89 -12.6 -2.87881 | gap 1, opp_overlap 1973650 1973655, overlap 1973655 1973662 CGGCATTAGAGTAGA TCCGAAACGTTTCGGAT TTAA ATCT-AAACGTTTCGGA TGTGTGACGAACTTA TERM 2128 1974078 - 1974094 + F 75 -5.9 -4.60487 | CATCACGTCCACGAG TGTTGAA TAA TTCGACA TTTTTGGAAATGATA TERM 2129 1974531 - 1974521 - f 71 -4.6 -4.59773 | GGGTATCTGCAAAAA GCGG ATC CCAC TCGTCCTGGCGGTTA TERM 2130 1974746 - 1974764 + F 100 -13.2 -4.01078 | CCAGGGGGTAATCTG CTCTCCTG ATT CAGGAGAG TTTATGGTCACTTTT y1093 1974768 - 1975790 + | transposase for insertion sequence IS100 TERM 2131 1975871 - 1975857 - g 77 -11.4 -3.3506 | overlap 1975848 TGGAAAGCCTTATAA GCGCAG CGC CTGCGC TGTCACAACAGGCAG YPO1730 1975787 - 1976569 + | transposase/IS protein TERM 2132 1976945 - 1976978 + T 71 -9.7 -2.66748 | opp_overlap 1976950, overlap 1976950 CAGTGATAGAAAAGC AAAAATCCCGCTTAG TTTC CTAAACGGGATTTTC TAAATTTGGCTCCTC TERM 2133 1976973 - 1976950 - T 100 -11.8 -5.15526 | opp_overlap 1976945 1976950 ATAGAAAAGCAAAAA TCCCGCTTAG TTTC CTAAACGGGA TTTTCTAAATTTGGC TERM 2134 1976950 - 1976973 + T 95 -9.6 -4.51196 | opp_overlap 1976950, overlap 1976945 ATAGAAAAGCAAAAA TCCCGCTTAG TTTC CTAAACGGGA TTTTCTAAATTTGGC YPO1732 1978050 - 1977238 - | hypothetical protein TERM 2135 1977999 - 1978020 + g 76 -5.8 -4.62772 | overlap 1978000 GTGCCTCATGCCATT GCGCAAGC ATCTCC GCTTGCGG TTTATTTGCTTTCCA TERM 2136 1978394 - 1978413 + r 76 -9.3 -3.49858 | opp_overlap 1978388, overlap 1978405 CTGAACTTATCAGCA GCCATGG CATTCA CCATGGC TTATGGTGTGCTTGA YPO1733 1978724 - 1978440 - | hypothetical protein TERM 2137 1978894 - 1978908 + r 75 -5.6 -4.71318 | GAGGAGCAGGGAAGG CCGCTG CTC CAGAGG TTGTTTTTTGATCTT YPO1734 1979812 - 1978961 - | hypothetical protein YPO1735 1981633 - 1979915 - | putative ABC transporter (ATP-binding protein) YPO1736 1982289 - 1982453 + | hypothetical protein YPO1737 1982921 - 1982535 - | AraC-family transcriptional regulatory protein TERM 2138 1982852 - 1982866 + g 70 -9.2 -3.56594 | opp_overlap 1982852, overlap 1982863 CTTCAAGATAGATGA CCCGCC CTA GGTGGG TTTCGACCCATTTAC TERM 2139 1983028 - 1983054 + H 71 -6.6 -4.14243 | opp_overlap 1983028 AATGTGCGGTAAAGA CTTTTTGGCCGA GGT TTGGCAAAAGAG TTTTCAAGTGCCATA TERM 2140 1983190 - 1983200 + H 87 -5.4 -5.42259 | TCTGATAGCGGTTGT TGGT GTA ACCA TTTTTTTAAAGATGC YPO1738 1983477 - 1983716 + | hypothetical protein YPO1739 1984025 - 1983807 - | hypothetical protein YPO1740 1984623 - 1984898 + | hypothetical protein TERM 2141 1984910 - 1984939 + F 95 -12.9 -3.10071 | opp_overlap 1984901 1984925, overlap 1984937 ATAAACGTGTCCCGA TGCTGGCACTACC AACA GGCAGTGTCAGCA TGTTACCTGCAATTT YPO1741 1985161 - 1985460 + | hypothetical protein YPO1742 1985503 - 1985814 + | hypothetical protein aroP 1986051 - 1987424 + | aromatic amino acid transport protein TERM 2142 1987658 - 1987694 + T 89 -6.8 -5.28481 | opp_overlap 1987660, overlap 1987660 AATTCGCCCTCAACC AAGCATATAACCAT TTTAATATT ATGGTTATATGCTG TTTTTTAGTTAAATA TERM 2143 1987692 - 1987660 - T 74 -9.4 -3.33696 | opp_overlap 1987658 1987660 TTCGCCCTCAACCAA GCATATAACCAT TTTAATATT ATGGTTATATGC TGTTTTTTAGTTAAA TERM 2144 1987660 - 1987692 + T 88 -9.4 -4.26777 | opp_overlap 1987660, overlap 1987658 TTCGCCCTCAACCAA GCATATAACCAT TTTAATATT ATGGTTATATGC TGTTTTTTAGTTAAA YPO1744 1988328 - 1987729 - | palmitoyl transferase for Lipid A YPO1745 1989330 - 1989446 + | hypothetical protein cspC 1989489 - 1989698 + | cold shock-like protein CspC TERM 2145 1989710 - 1989741 + T 86 -11.7 -3.34398 | opp_overlap 1989699 1989718, overlap 1989718 CTAATCAGCGTTTGC TGTAAAAACCCGC CTTTGT GCGGGTTTTTTCA TATTTGGGGAAACCC TERM 2146 1989718 - 1989733 + T 91 -7.5 -5.32699 | opp_overlap 1989718, overlap 1989710 CGTTTGCTGTAAAAA CCCGC CTTTGT GCGGG TTTTTTCATATTTGG TERM 2147 1989733 - 1989718 - T 78 -7.5 -4.56597 | opp_overlap 1989718 1989710 CGTTTGCTGTAAAAA CCCGC CTTTGT GCGGG TTTTTTCATATTTGG YPO1747 1990544 - 1989789 - | hypothetical protein TERM 2148 1990896 - 1990910 + H 76 -7.8 -4.22858 | overlap 1990893 TAACGCCGCATCTGC CCGCTA TCT TGGCGG TTATTTATCTGTTAT rrmA 1990939 - 1991778 + | 23S rRNA methyltransferase A YPO1749 1992278 - 1992000 - | hypothetical protein TERM 2149 1992495 - 1992464 - H 100 -9.5 -4.98255 | overlap 1992466 GGCCAATCATAAAAA CATTGCAGGTGAC ATGATA GCCACCCGCAATA TACCTCAAGAGGTGA TERM 2150 1992493 - 1992466 - H 88 -9.9 -4.11322 | overlap 1992464 CCAATCATAAAAACA TTGCAGGTGAC ATGATA GCCACCCGCAA TATACCTCAAGAGGT TERM 2151 1992624 - 1992642 + H 100 -13.2 -4.01078 | CCAGGGGGTAATCTG CTCTCCTG ATT CAGGAGAG TTTATGGTCACTTTT y1093 1992646 - 1993668 + | transposase for insertion sequence IS100 TERM 2152 1993749 - 1993735 - g 77 -11.4 -3.3506 | overlap 1993726 TGGAAAGCCTTATAA GCGCAG CGC CTGCGC TGTCACAACAGGCAG YPO1751 1993665 - 1994447 + | transposase/IS protein TERM 2153 1995367 - 1995385 + F 71 -6.6 -4.22214 | GGGCAGCTTCACTGG CGCGCAGG GCA TCTTCGCG TTGTTTTCGCTCACT TERM 2154 1996946 - 1996924 - g 74 -12 -2.82623 | opp_overlap 1996922 1996921 1996925, overlap 1996921 CTCTCTCCATAAGTA CGGAGCCGAA ACG TTCGGCTCCT CGTCTTTTGTGCGTC TERM 2155 1996925 - 1996945 + G 90 -15.5 -2.98789 | opp_overlap 1996924 1996921, overlap 1996922 1996921 TCTCTCCATAAGTAC GGAGCCGAA ACG TTCGGCTCC TCGTCTTTTGTGCGT TERM 2156 1997338 - 1997312 - g 71 -5.8 -4.36914 | overlap 1997297 1997295 1997313 CGCTTCGGTACAAAA CGTGCGGGGTTA TGG TAACCCATCACA GAATTACCGTATTCG TERM 2157 1998833 - 1998823 - g 74 -6.8 -4.33165 | CTAAACTGACTAAAA CCCA AAA TGGG ACGAACAACGGTAAC fcuA 1996899 - 1999175 + | ferrichrome receptor protein TERM 2158 1999243 - 1999281 + T 100 -24.8 -3.00946 | opp_overlap 1999247, overlap 1999247 AACAGGTGCTTTACT GAAATCCCCCGGCGATTT GAT ATATCGCCGGGGGATTTC TCATTTATCGCGCAG TERM 2159 1999247 - 1999277 + T 100 -19.8 -4.17701 | opp_overlap 1999247, overlap 1999243 GGTGCTTTACTGAAA TCCCCCGGCGATTT GAT ATATCGCCGGGGGA TTTCTCATTTATCGC TERM 2160 1999277 - 1999247 - T 100 -19.8 -3.64703 | opp_overlap 1999243 1999247 GGTGCTTTACTGAAA TCCCCCGGCGATTT GAT ATATCGCCGGGGGA TTTCTCATTTATCGC yebN 1999905 - 1999336 - | hypothetical protein TERM 2161 1999599 - 1999610 + g 78 -2.2 -5.24449 | CCAACACCCAAAAAC TGTG ACTG CGCA TTTTTTCCGTTTCTG yobD 2000795 - 2000334 - | hypothetical protein TERM 2162 2000972 - 2000949 - R 100 -8.8 -4.89567 | opp_overlap 2000952, overlap 2000952 GTCTAAAAGATAAAA TAACCGGGAG CAAG CCCCCGGTTT TGGATGAAGATAATC TERM 2163 2000969 - 2000952 - R 100 -10.5 -4.52747 | opp_overlap 2000952, overlap 2000949 TAAAAGATAAAATAA CCGGGAG CAAG CCCCCGG TTTTGGATGAAGATA TERM 2164 2000952 - 2000969 + r 79 -8.3 -4.18494 | opp_overlap 2000952 2000949 TAAAAGATAAAATAA CCGGGAG CAAG CCCCCGG TTTTGGATGAAGATA manZ 2001882 - 2000995 - | mannose-specific PTS system protein IID TERM 2165 2001514 - 2001481 - G 70 -9.5 -3.33162 | overlap 2001457 TACGGTACCCCAGAA GATCGGGTCACCGAC ACCG GCCAGTGGCCCCATC AGACCCACTTTAATG manY 2002686 - 2001889 - | PTS system, mannose-specific IIC component gptB 2003752 - 2002778 - | PTS system, mannose-specific IIAB component yoaE 2004523 - 2005917 + | hypothetical protein TERM 2166 2005931 - 2005958 + T 100 -17 -3.62046 | opp_overlap 2005925 AAGCAGAGAGTGGAA CCTCAGGGGCGC TTCG GCTCCCCTGAGG TTATTGACAACGTAC hpaR 2006486 - 2006019 - | homoprotocatechuate degradative operon repressor TERM 2167 2006444 - 2006434 - G 87 -4.6 -5.42862 | ATAGGCCGAAAAAAA GCCA TAG CGGC TTCACGAGCCTGCAA TERM 2168 2006707 - 2006731 + H 78 -10.3 -3.31144 | opp_overlap 2006705 2006707 2006710, overlap 2006692 2006710 TTGTTTTTTTAAAGA CAATTTATTTA TTG TAAATAAATTG TTATCAAGATCACGA TERM 2169 2006731 - 2006707 - H 78 -10.3 -3.34398 | opp_overlap 2006692 2006707 2006710, overlap 2006705 2006710 TTGTTTTTTTAAAGA CAATTTATTTA TTG TAAATAAATTG TTATCAAGATCACGA TERM 2170 2007057 - 2007071 + H 73 -10 -2.96249 | overlap 2007054 TTACCGTGATGAGTG GTGCCA CCT TGGCAC TGGTTGTTGGTCAGG TERM 2171 2009091 - 2009109 + G 74 -2.3 -5.06414 | CTCAATGGTGAACGT TGCACGG CGGGT TCGCGCA TTTTTATTCAAGAGA hpaE 2008260 - 2009657 + | 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase hpaD 2009776 - 2010633 + | 3,4-dihydroxyphenylacetate 2,3-dioxygenase hpaF 2010658 - 2011056 + | 5-carboxymethyl-2-hydroxymuconate delta-isomerase TERM 2172 2011663 - 2011651 - g 71 -10.5 -3.10344 | opp_overlap 2011658 GCGTGATTGAAGAGA GCGGC GTT GCCGC GGCGGTATTGAATCA hpaH 2011050 - 2011853 + | 2-oxo-hept-3-ene-1,7-dioate hydratase TERM 2173 2011929 - 2011912 - g 91 -2.7 -5.72207 | CTGAAAGCAAAAAAA CCACAAA TTGG CTTATGG CTAGGTTTGTGTAGC hpaI 2011864 - 2012670 + | 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase TERM 2174 2012764 - 2012749 - g 76 -3.2 -5.06414 | GCCGGTCAATAAAAA CACACC ATTA AGTGCG CAGCAGCAGTCCGTC TERM 2175 2013469 - 2013439 - g 75 -10.5 -3.36569 | overlap 2013437 2013440 2013465 GCAATTGGCGAAACA GGCGGATTATGGT GCCTT ACCACAATCCGCG ATGTGGCGGGAAATT TERM 2176 2013468 - 2013440 - g 81 -14 -2.6162 | overlap 2013439 2013437 2013465 CAATTGGCGAAACAG GCGGATTATGGT GCCTT ACCACAATCCGC GATGTGGCGGGAAAT hpaX 2012696 - 2014063 + | putative 4-hydroxyphenylacetate permease hpaB 2014131 - 2015693 + | 4-hydroxyphenylacetate 3-monooxygenase hpaC 2015714 - 2016211 + | 4-hydroxyphenylacetate 3-monooxygenase coupling protein TERM 2177 2016252 - 2016213 - T 100 -15.2 -3.55444 | opp_overlap 2016213 CGGTGATGGTGTAAA CCTCTAATGCCCGTCA TATTTAAC TGACGTGCATTAGAGG TTGTTGACAAAGTGC TERM 2178 2016213 - 2016252 + T 100 -15.2 -3.62046 | opp_overlap 2016213 CGGTGATGGTGTAAA CCTCTAATGCCCGTCA TATTTAAC TGACGTGCATTAGAGG TTGTTGACAAAGTGC TERM 2179 2016340 - 2016322 - T 100 -8.8 -4.82901 | opp_overlap 2016336 TTCCCTGCATAAAAA TAGCCCTC CCT GGGGGCTA GCCGCGCCATCCTTT TERM 2180 2016509 - 2016491 - T 78 -2.4 -5.47218 | overlap 2016495 TGTCAGCGAAAAAAA TCAAGTAC ACT GCACTTTA ATCGCCAGGCCACCA sdaA 2017855 - 2016491 - | L-serine dehydratase TERM 2181 2017422 - 2017410 - G 71 -5.5 -4.56607 | opp_overlap 2017414, overlap 2017414 TCATCAACGATAAAA CCACC GCC GATGG AGTAGTATGTTTTGC TERM 2182 2018152 - 2018172 + r 70 -7.5 -3.79993 | TTCTAGTTATTCAGC TACGGGGTC AAT GGCCCGGTA TATTTTGGTCTCTAA TERM 2183 2018554 - 2018539 - R 86 -11.8 -3.07962 | opp_overlap 2018539 TGTCACAGGTTAACA GCCGCC AAAT GGCGGC TTTATGAGTCAAATA TERM 2184 2018539 - 2018554 + r 100 -11.8 -3.92373 | opp_overlap 2018539 TGTCACAGGTTAACA GCCGCC AAAT GGCGGC TTTATGAGTCAAATA YPO1772 2019162 - 2018563 - | hypothetical protein pabB 2020535 - 2019159 - | para-aminobenzoate synthase component I YPO1774 2020700 - 2020957 + | hypothetical protein TERM 2185 2021020 - 2021047 + T 87 -8.5 -4.49958 | opp_overlap 2021020, overlap 2021024 ATTGATAGATAAAAA TAAACCCGCTG GCTGAA TGGCGGGTTTA TTTATTTGCTAGCGT TERM 2186 2021047 - 2021020 - T 89 -7.1 -5.04597 | opp_overlap 2021020 2021024 ATTGATAGATAAAAA TAAACCCGC TGGCTGAATG GCGGGTTTA TTTATTTGCTAGCGT TERM 2187 2021024 - 2021043 + T 74 -4.9 -4.80736 | opp_overlap 2021020, overlap 2021020 ATAGATAAAAATAAA CCCGCTG GCTGAA TGGCGGG TTTATTTATTTGCTA purT 2022264 - 2021083 - | phosphoribosylglycinamide formyltransferase 2 TERM 2188 2021223 - 2021263 + g 72 -9.8 -3.37975 | gap 1, overlap 2021244 ATAACCGAATCTGTG TATCGCCTATC-AGGGCAG TTTC CAGCCCGCGATAGGTGATA TTCTGGCTGGTCAGT dbpA 2022577 - 2023959 + | ATP-dependent RNA helicase DbpA YPO1777 2024053 - 2024373 + | hypothetical protein YPO1778 2024413 - 2024721 + | hypothetical protein YPO1779 2024813 - 2025238 + | hypothetical protein TERM 2189 2025311 - 2025331 + F 72 -9.7 -2.83112 | opp_overlap 2025301 AATAACCCGCTATGT TTGAGGGCA TAT TGCCCTCCA TCTGGTCAATTCAAT ptrB 2025548 - 2027599 + | oligopeptidase B TERM 2190 2027860 - 2027843 - f 100 -9.8 -5.66229 | opp_overlap 2027843 ATGAACAATAAAAAA CCCGCC GATAAT GGCGGG TTAACTCACGAAACG TERM 2191 2027843 - 2027860 + F 76 -10.5 -3.05384 | opp_overlap 2027843 ATGAACAATAAAAAA CCCGCCG ATAA TGGCGGG TTAACTCACGAAACG pip 2028321 - 2029271 + | proline iminopeptidase holE 2029561 - 2029331 - | DNA polymerase III subunit theta TERM 2192 2030115 - 2030096 - g 70 -2.2 -5.00616 | gap 1, opp_overlap 2030081, overlap 2030099 TGCCTTTTTAAAAAA GCAT-TCTC AAG AAGAAATGC AACATATGGAACGTT ftn 2029962 - 2030471 + | ferritin TERM 2193 2030492 - 2030520 + F 100 -10.3 -4.47456 | ATTGAGAAAATATTC GCCGCGGTACT ATTATTG GGTACTGCGGC TTTGTTGTTGCCTAT TERM 2194 2030543 - 2030555 + F 75 -3.3 -5.18715 | overlap 2030544 TTGCCTATCCCTCCC CGCGA TCC TCGCC TTTTCTTGTTTTTCT YPO1784 2030868 - 2031254 + | putative copper resistance protein TERM 2195 2031306 - 2031332 + G 77 -12.4 -3.03903 | overlap 2031308 TTCTGCACTTTATGG CAGTGATGCTGA TGT TTGGCATCACTG TATTCACCGCCTTTT YPO1785 2031257 - 2032141 + | putative copper resistance protein D yebY 2032223 - 2032579 + | hypothetical protein TERM 2196 2032808 - 2032835 + F 100 -7.8 -5.77856 | AGAGCCATTTCCCTA GACCGAATATCA GGAA TCGTATTCGGTC TTTTTTTAATTTATT TERM 2197 2032965 - 2032982 + G 71 -5.5 -4.57073 | ATGAGTCATTTTCAT CGACTTG TGGC CAAGCCG TTTTTGGGCGAACTG YPO1787 2032859 - 2033089 + | hypothetical protein TERM 2198 2033095 - 2033078 - T 75 -8.4 -3.89336 | opp_overlap 2033077 TTAACCAAAGCGAAA CTGGGC AATTAA GCCCAG CCTATTTCAGTCATA YPO1788 2033428 - 2033102 - | putative acyl carrier protein YPO1789 2033880 - 2033422 - | hypothetical protein TERM 2199 2033618 - 2033631 + g 78 -2.3 -5.27476 | overlap 2033619 CATGTAGGTAGCGAC ATCCC AAAT GGGAA TTTTGTTTTCTTAAA TERM 2200 2033668 - 2033682 + g 70 -4.2 -4.65078 | overlap 2033659 TCGTGCCGCTTTGGA GGCGTA TGA TGTGCC TTTTGTTGCACCTAT TERM 2201 2035169 - 2035156 - g 70 -9.5 -3.21218 | ATTCGTCAGCAGCAA CGGGC GATG GCCCG TCGTCGGATGATGGT flhB 2034412 - 2035572 + | flagellar biosynthesis protein FlhB TERM 2202 2035850 - 2035838 - g 73 -9.1 -3.78775 | opp_overlap 2035837 2035834 GCGTCTATCACTAAA CGTGG CTT CCACG CGTATTATTCTGATG TERM 2203 2036133 - 2036121 - g 74 -2.6 -5.17576 | GATGAAGCGAAAAAA CGCC GCTCT GACG TTACGCAAGAGGCTG TERM 2204 2036579 - 2036566 - g 74 -6.7 -4.42062 | overlap 2036571 TACGTGGTAAACAAA CACAG CAGC CTGTG GCAGTAGAAGCACCC flhA 2035572 - 2037650 + | flagellar biosynthesis protein FlhA flhE 2037650 - 2038072 + | flagellar protein FlhE precursor TERM 2205 2039617 - 2039599 - f 100 -16 -4.37092 | opp_overlap 2039599 ATTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC TERM 2206 2039599 - 2039617 + F 100 -16 -3.07307 | opp_overlap 2039599 ATTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC tnp 2039730 - 2040188 + | transposase for the IS1541 insertion element TERM 2207 2040262 - 2040294 + T 100 -11.3 -4.26076 | opp_overlap 2040269, overlap 2040266 2040268 2040269 CCTTATAGGCGCATA TGAAAAACCTCCGGC TAT GCCGGAGGATATTTA TTTTGGTAAAGATAA TERM 2208 2040266 - 2040290 + T 100 -9.9 -4.72007 | opp_overlap 2040269, overlap 2040262 2040268 2040269 ATAGGCGCATATGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTTTGGTAAAG TERM 2209 2040268 - 2040288 + T 100 -12.5 -3.97149 | opp_overlap 2040269, overlap 2040266 2040262 2040269 AGGCGCATATGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTTTGGTAA TERM 2210 2040269 - 2040287 + T 100 -16 -2.97205 | opp_overlap 2040269, overlap 2040268 2040266 2040262 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTTGGTA TERM 2211 2040287 - 2040269 - T 100 -16 -4.8048 | opp_overlap 2040268 2040266 2040262 2040269 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTTGGTA TERM 2212 2042459 - 2042489 + T 100 -17.7 -5.40474 | opp_overlap 2042459 2042462 CAAACGTCCAGAGAA CAACGCCGCTCAG GTTAA TTGAGCGGCGTTG TTTTTTTAAAAGGAT TERM 2213 2042489 - 2042459 - T 100 -17 -3.51161 | opp_overlap 2042459, overlap 2042462 CAAACGTCCAGAGAA CAACGCCGCTCA GGTTAAT TGAGCGGCGTTG TTTTTTTAAAAGGAT TERM 2214 2042486 - 2042462 - T 100 -12.9 -3.885 | opp_overlap 2042459, overlap 2042459 ACGTCCAGAGAACAA CGCCGCTCA GGTTAAT TGAGCGGCG TTGTTTTTTTAAAAG flgN 2042980 - 2042540 - | flagella synthesis protein FlgN flgM 2043301 - 2042999 - | anti-sigma28 factor FlgM flgA 2044150 - 2043452 - | flagellar basal body P-ring biosynthesis protein FlgA flgB 2044389 - 2044802 + | flagellar basal body rod protein FlgB flgC 2044808 - 2045212 + | flagellar basal body rod protein FlgC flgD 2045227 - 2045904 + | flagellar basal body rod modification protein TERM 2215 2046323 - 2046347 + G 80 -4.9 -5.1287 | overlap 2046324 2046325 CCACTAATCGTCGTT TGGATCTGGCT ATC AGCCAGAACGG TTTTTTCCGTATGCA flgE 2046106 - 2047392 + | flagellar hook protein FlgE flgF 2047414 - 2048043 + | flagellar basal body rod protein FlgF YPO1804 2048024 - 2048722 + | flagellar basal-body rod protein FlgG TERM 2216 2048759 - 2048725 - f 72 -9.8 -2.74144 | overlap 2048724 GGCTCAGCTGTAAAC CTGCTTTCGGGGGGCA TCA TGCCCCCTGATCGCCG CAGCATAATAGGTCT flgH 2048866 - 2049555 + | flagellar basal body L-ring protein flgI 2049570 - 2050679 + | flagellar basal body P-ring protein flgJ 2050679 - 2051623 + | peptidoglycan hydrolase TERM 2217 2052951 - 2052934 - g 72 -9.9 -3.38178 | GAACCAATTCCAGAA CGCAGAT AAAT ATCTGCG GGATATGGATGACGG TERM 2218 2053917 - 2053932 + G 70 -8.2 -3.76402 | opp_overlap 2053909 GTAAAACCACCTTGT CCGGTG CTTA CGCCGG TTTAGTCAGTAACGT flgK 2052494 - 2054158 + | flagellar hook-associated protein FlgK TERM 2219 2054927 - 2054917 - g 85 -4 -5.40072 | TGCTGCGGAAAAAAA TATC TTT GATA CCATTGATACGGTAC TERM 2220 2054970 - 2054958 - g 70 -3.3 -4.77157 | TGAATTCATTAAAAA CCCCG CTG CAAGG AGCCTCTGACGAGGT flgL 2054264 - 2055277 + | flagellar hook-associated protein FlgL YPO1810 2056283 - 2055306 - | putative transcriptional regulatory protein YPO1811 2056525 - 2058591 + | short chain dehydrogenase YPO1812 2058739 - 2059800 + | putative sugar transport system permease protein TERM 2221 2060654 - 2060680 + G 88 -14.4 -3.4252 | opp_overlap 2060650 2060649 2060647 ATCCTAAAGATGCCA GCCTGGCGATGG ATA CCGTCGCCAAGC TTCTGCTCGATAAAA TERM 2222 2060712 - 2060698 - g 86 -5.6 -5.24129 | CTGCTCGATAAAAAA CCCCTC ACT GATGGG ATGAATCTGGGGGTG YPO1813 2059843 - 2060838 + | putative sugar-binding periplasmic protein YPO1814 2060904 - 2062481 + | putative sugar ABC transporter, ATP-binding protein YPO1815 2062577 - 2063506 + | putative sugar ABC transporter, permease TERM 2223 2064202 - 2064218 + G 71 -7.9 -4.11216 | GTTTTTCCTGAACCG CGGGGTG GGC CACACCG TTTTCAAAATGGGGG YPO1816 2063555 - 2064514 + | putative sugar kinase TERM 2224 2064738 - 2064721 - T 87 -8.3 -4.41548 | overlap 2064732 CGAGAGGTCAGAAAA GGGGGGG TAAA CCCCGCC GAAACGGGGCGATAA TERM 2225 2064747 - 2064732 - T 71 -8.2 -3.55203 | overlap 2064721 AAAAGGGGGGGTAAA CCCCGC CGAA ACGGGG CGATAAGCAGCGACA YPO1817 2065191 - 2064772 - | hypothetical protein YPO1818 2065604 - 2065236 - | hypothetical protein fliR 2066407 - 2065625 - | flagellar biosynthesis protein FliR fliQ 2066679 - 2066410 - | flagellar biosynthesis protein FliQ fliP 2067609 - 2066785 - | flagellar biosynthesis protein FliP fliO 2067974 - 2067606 - | flagellar protein FliO TERM 2226 2067985 - 2067959 - G 76 -12.2 -3.02144 | opp_overlap 2067957 2067956 CCACCTGCGTTAACA CCCCCCCTGC AGGCATG GCCGGGGGGG CGGCGCTTGATTGCG fliN 2068558 - 2068142 - | flagellar motor switch protein FliN TERM 2227 2068446 - 2068465 + g 76 -3.4 -5.1485 | overlap 2068450 AGCGATTTAAAGACG CCTTCGGT TGTG GCCGTGGG TTTTTCTGTTGCTTG fliM 2069556 - 2068555 - | flagellar motor switch protein FliM TERM 2228 2069225 - 2069235 + g 76 -8.2 -4.18018 | opp_overlap 2069218 ACGAATAGCGCAGTA CCGC GTA GCGG TTTTAGATGCACCAG fliL 2070032 - 2069562 - | flagellar basal body-associated protein FliL fliK 2071651 - 2070299 - | flagellar hook-length control protein FliK fliJ 2072094 - 2071648 - | flagellar biosynthesis chaperone fliI 2073648 - 2072194 - | flagellum-specific ATP synthase fliH 2074327 - 2073611 - | flagellar assembly protein H fliG 2075312 - 2074320 - | flagellar motor switch protein G fliF 2077021 - 2075309 - | flagellar MS-ring protein TERM 2229 2076885 - 2076867 - G 77 -11 -3.3573 | overlap 2076856 TAAAGGACGCGATAA TCCGGGCT TTT AGCCCAGA GCATCAAGGCGACAA TERM 2230 2077468 - 2077450 - g 70 -4.5 -4.72272 | gap 1, overlap 2077451 2077452 CGGGGTCAGCAAAAA CCCTGCCC GCAG AGGC-GGG CTTCGCCAGTGAACT fliE 2077374 - 2077685 + | flagellar hook-basal body protein FliE YPO1832 2077947 - 2078252 + | hypothetical protein YPO1833 2078263 - 2078739 + | hypothetical protein TERM 2231 2078759 - 2078774 + T 80 -6.1 -4.8066 | opp_overlap 2078759 CGTATGAGATATCAA CCCAC TTAGCT GTGGG TTTTTGCGTTATCTT YPO1834 2079536 - 2078925 - | putative glycosidase TERM 2232 2080778 - 2080791 + r 89 -6.7 -5.38549 | TTTACTCTCCATCGC TGCTC TGGC GAGCA TTTTTGTTATTTCAG TERM 2233 2081189 - 2081170 - R 70 -3.6 -4.79223 | overlap 2081173 GTACAGGATTAAAAA TATTGAAG TTAT CTTCATTA ACCTGCAACGATGGC TERM 2234 2082306 - 2082294 - R 95 -4.7 -5.80817 | overlap 2082295 CGCAACATAAAAAAA TCCCC ATT GGGGT AAGCGCTGTATACGG TERM 2235 2082305 - 2082295 - R 77 -8.2 -4.06863 | overlap 2082294 GCAACATAAAAAAAT CCCC ATT GGGG TAAGCGCTGTATACG TERM 2236 2082840 - 2082829 - R 70 -5.8 -4.40561 | opp_overlap 2082813 CGGCCTTAAAAAGAA CGCT TTAA AGCG CAAAATATCTAAAAG YPO1837 2083881 - 2083006 - | putative AraC-family transcriptional regulatory protein YPO1838 2084127 - 2083888 - | hypothetical protein TERM 2237 2083973 - 2083960 - G 83 -3.1 -5.46657 | TATTTTAATAAAAAA CTTAC CATA GCAAG CCACTTCGACTATAA fliT 2084544 - 2084182 - | flagellar biosynthesis protein FliT fliS 2084953 - 2084555 - | flagellar protein FliS TERM 2238 2084853 - 2084839 - G 76 -12.8 -2.71144 | opp_overlap 2084829, overlap 2084827 TACGTGCGCGAATCA GGGCGC TTT GCGCCC CATCGAACAGCATCA fliD 2086364 - 2084964 - | flagellar capping protein fliC 2086661 - 2087770 + | flagellin TERM 2239 2087799 - 2087814 + F 91 -8.2 -4.69027 | overlap 2087811 ATACCCTTATTCCAA CCCTGC TGCG GCGGGG TTTTTACCTCAGTTT TERM 2240 2087945 - 2087935 - f 81 -5.4 -5.10064 | GGGAACAGATAAAAA TCAG ACG CTGA GAATGCACTTCAAGG fliA 2088117 - 2088839 + | flagellar biosynthesis sigma factor TERM 2241 2089098 - 2089085 - g 95 -5.9 -5.47218 | opp_overlap 2089085 CTCCAGTTAAAAAAA CGGCC GCTG AGCCG TTATTTAAAAGATTA fliZ 2089061 - 2089570 + | flagella biosynthesis protein FliZ yedO 2089859 - 2090851 + | D-cysteine desulfhydrase fliY 2090975 - 2091775 + | cystine transporter subunit TERM 2242 2091794 - 2091813 + G 100 -12.2 -5.06816 | opp_overlap 2091793 CAGAAAGTATGCAAT TGGTGCTG GATT CAGCACCA TTTTTATTGAAGGGT yecS 2091775 - 2092437 + | putative amino-acid ABC transporter (permease) yecC 2092440 - 2093201 + | putative amino-acid ABC transporter ATP-binding protein YecC TERM 2243 2093278 - 2093252 - T 84 -10.1 -3.82218 | gap 1, opp_overlap 2093261, overlap 2093253 2093268 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 2244 2093279 - 2093253 - T 72 -10.1 -2.88849 | gap 1, opp_overlap 2093261, overlap 2093252 2093268 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT TERM 2245 2093358 - 2093372 + T 100 -10 -4.72272 | opp_overlap 2093352 TGTCAATAACCTCAA CCACTG ATT CAGTGG TTTTTGGTGGCAAAA TERM 2246 2093454 - 2093478 + T 100 -12.2 -3.78312 | opp_overlap 2093452 GGCATTTTTAATATG TTGGGGGCCA CGGTA TGGTCCCCAA TTTGCTAGATAATTT YPO1849 2093831 - 2093493 - | hypothetical protein YPO1850 2094200 - 2093865 - | hypothetical protein TERM 2247 2094578 - 2094591 + r 74 -9.5 -3.39895 | opp_overlap 2094578 TGTTGGTTGGCAAAA GGCCC CGAA GGGCC TTAATTGATAAACCG TERM 2248 2094591 - 2094578 - R 83 -9.5 -4.07568 | opp_overlap 2094578 TGTTGGTTGGCAAAA GGCCC CGAA GGGCC TTAATTGATAAACCG putA 2098635 - 2094664 - | trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase TERM 2249 2096409 - 2096386 - G 70 -9.6 -3.28745 | opp_overlap 2096406, overlap 2096389 GGCGTAATAATGCAA GAAGTCCACG GCTT CACGGACTTC GGCGATGGCATTACT TERM 2250 2098203 - 2098214 + g 78 -2.2 -5.26875 | gap 1, overlap 2098194 GTACCATGCCCGCGC G-GCC ATG GGCAC TTTTTTGATTACGCA YPO1852 2098980 - 2099177 + | hypothetical protein TERM 2251 2100588 - 2100602 + G 76 -4.2 -4.91109 | overlap 2100590 TTCCAGGCTTCTTGT TTGCCA GTT TGGCTA TTTTTGTCGTCAGCC putP 2099207 - 2100691 + | proline permease TERM 2252 2100731 - 2100760 + F 73 -8.6 -3.59698 | opp_overlap 2100733 2100735, overlap 2100733 ATACGTTTAACTACA CATAGCCTCCTG CCATAA CAGGGGGCTATC TTGTATGTAAAATCA TERM 2253 2100733 - 2100758 + F 81 -11.2 -3.37466 | opp_overlap 2100733 2100735, overlap 2100731 ACGTTTAACTACACA TAGCCTCCTG CCATAA CAGGGGGCTA TCTTGTATGTAAAAT TERM 2254 2100758 - 2100733 - f 73 -9.7 -3.00476 | opp_overlap 2100733 2100731, overlap 2100735 ACGTTTAACTACACA TAGCCTCCTGC CATA ACAGGGGGCTA TCTTGTATGTAAAAT YPO1854 2101024 - 2101872 + | hypothetical protein TERM 2255 2102392 - 2102370 - g 74 -8.4 -4.08485 | GTCAGCCAAACCAAA GCGTTCACCG ATG CAGTGAAGGC TGGGGATCTGGCACT YPO1855 2101902 - 2103032 + | hypothetical protein TERM 2256 2103076 - 2103056 - g 100 -12.5 -4.63586 | overlap 2103057 2103068 ACATGAGAGACAAAA CCGGCCCGA AAT TCGGGCCGT ATCAACCGGATGATG TERM 2257 2103075 - 2103057 - g 100 -16 -3.37067 | overlap 2103056 2103068 CATGAGAGACAAAAC CGGCCCGA AAT TCGGGCCG TATCAACCGGATGAT TERM 2258 2103101 - 2103116 + G 74 -7.5 -4.20136 | overlap 2103099 ATGATGAGGCGGTGT CGCCG TCACGT CGGCG TTTAATTTTAGGGAT TERM 2259 2103861 - 2103846 - g 77 -9 -4.00042 | CTGGGTATCAAATAA TGCAGG CGAG CCTGCA TGGGCGGTAGGGGGA YPO1856 2103043 - 2104347 + | hypothetical protein TERM 2260 2104354 - 2104376 + T 91 -7.7 -4.8667 | opp_overlap 2104354 2104352 2104350 GAAGCTTAAAATACA GCACCGC CATCATCGC GCGGTGC TTTTTATGACGTCTA wrbA 2105032 - 2104433 - | TrpR binding protein WrbA TERM 2261 2105110 - 2105065 - H 80 -9.9 -3.69684 | gap 1, opp_overlap 2105072 AAATTTATTGAATAA GGCTGAT-GATGTCATTAGTCG TCG CGGCTAATGACACCTATTAACC ATAAGCTAATCAGCA TERM 2262 2105072 - 2105102 + H 100 -13.4 -3.04263 | opp_overlap 2105065 TTGAATAAGGCTGAT GATGTCATTAGTCG TCG CGGCTAATGACACC TATTAACCATAAGCT YPO1858 2105426 - 2106604 + | hypothetical protein TERM 2263 2106718 - 2106684 - T 100 -17.4 -3.59738 | opp_overlap 2106689, overlap 2106689 GATTAGAGGGGGAAA TAAAACGGTACCAGAA CAC CTCTGGCACCGTTTTA TCACACTGTGGTTAT TERM 2264 2106713 - 2106689 - T 100 -12.9 -4.87803 | opp_overlap 2106689, overlap 2106684 GAGGGGGAAATAAAA CGGTACCAGAA CAC CTCTGGCACCG TTTTATCACACTGTG TERM 2265 2106689 - 2106713 + T 93 -10 -4.39426 | opp_overlap 2106684 2106689 GAGGGGGAAATAAAA CGGTACCAGA ACACC TCTGGCACCG TTTTATCACACTGTG cycA 2108154 - 2106730 - | D-alanine/D-serine/glycine permease TERM 2266 2106877 - 2106865 - G 76 -6.2 -4.73614 | CAGTACCAAAACAAA GGCG AAAAA CGCC ATACAAACCCATGAC TERM 2267 2106911 - 2106900 - G 70 -2.2 -5.00895 | opp_overlap 2106910 CCCATGACATAAAAA TACC GGCT GGCA TTTTGTAGATGGATT ail 2109269 - 2109820 + | attachment invasion locus protein TERM 2268 2109846 - 2109872 + T 85 -5.9 -5.18357 | gap 1 TCTATATAATAATAA CAGCCGTATTAG TTCA CTG-TGCGGCTG TTTTTTCATCAGTTG YPO1861 2110041 - 2109859 - | hypothetical protein YPO1862 2110160 - 2110414 + | hypothetical protein glpM 2110783 - 2110442 - | hypothetical protein YPO1864 2111135 - 2110911 - | hypothetical protein TERM 2269 2111538 - 2111548 + H 78 -4 -5.14477 | TTAACTTATCTAATG CTAA TAA TTAG TTTTTTGAATGTATG TERM 2270 2111996 - 2112009 + GH 71 -5.3 -4.57569 | opp_overlap 2111994 2111996, overlap 2111976 GGGTTGGAAGCAACA CGTAA AATT TTACG TTTTTCGCCGGATAC uvrY 2111798 - 2112454 + | response regulator uvrC 2112426 - 2114279 + | excinuclease ABC subunit C pgsA 2114338 - 2114886 + | phosphatidylglycerophosphate synthetase TERM 2271 2115073 - 2115057 - T 76 -10.9 -2.62616 | TCAGTTGGTAGAGCA CGACCTT GCC AAGGTCG GGGTCGCGAGTTCGA TERM 2272 2115288 - 2115268 - T 76 -10.5 -2.90714 | opp_overlap 2115267, overlap 2115271 TGAAATCGGTAGACA CAAGGGATT TAA AATCCCTCG GCTTATGGCTGTGCG TERM 2273 2115285 - 2115271 - T 73 -8.6 -3.5947 | opp_overlap 2115267, overlap 2115268 AATCGGTAGACACAA GGGATT TAA AATCCC TCGGCTTATGGCTGT TERM 2274 2115375 - 2115388 + T 100 -9.5 -5.69473 | CGAGTATGTCGTTAA CCGCC GAGA GGCGG TTTTTTTGTGATCTA YPO1868 2116141 - 2115626 - | hypothetical protein YPO1869 2116252 - 2116479 + | replicative DNA helicase (partial) YPO1870 2116848 - 2116994 + | hypothetical protein TERM 2275 2117080 - 2117097 + T 75 -3.3 -5.12172 | ATGTACTGAGCCACC CGTCGGG AACG CCTTACG TTTTATTTATTGCTA YPO1871 2117974 - 2117816 - | hypothetical protein YPO1872 2118347 - 2118003 - | hypothetical protein tnpA 2119526 - 2118567 - | putative transposase YPO1874 2120044 - 2119598 - | hypothetical protein TERM 2276 2119803 - 2119813 + g 76 -4.6 -5.0133 | TGCGCTATCTGCGCG GGGT AAA GCCC TTTTTTACGGCAGTA YPO1875 2120268 - 2120128 - | putative major tail sheath protein (partial) TERM 2277 2120411 - 2120379 - R 71 -10 -2.62614 | overlap 2120372 2120377 2120378 GAAAACTATAAAACG GGTAACCACTTTAC GCGAT ATAGAGTGGTTACC ATTAACAGGAAAGTG YPO1876 2120687 - 2120433 - | hypothetical protein YPO1877 2120997 - 2120692 - | hypothetical protein YPO1878 2121209 - 2120994 - | hypothetical protein TERM 2278 2121170 - 2121155 - G 70 -3.3 -4.89233 | TACCAACACCAAAAA TACTC AAAGGG GAGTA GTGAGCATTGTTAAC YPO1879 2121931 - 2121644 - | hypothetical protein YPO1880 2122247 - 2121948 - | hypothetical protein YPO1881 2122603 - 2122244 - | hypothetical protein TERM 2279 2122354 - 2122338 - G 85 -7.2 -4.8048 | overlap 2122342 GGCGCAGACCAAAAA CGCACC CGCCC GGCGCG CAGGGTTAACCAATT YPO1882 2122887 - 2123177 + | hypothetical protein TERM 2280 2123297 - 2123267 - T 76 -11.2 -2.72511 | overlap 2123266 TGCATCCCCCCAAAG GTTCCCGGATACTT ACA AAGAATTCGGGAAC AATATAAGGAAAGTG TERM 2281 2123776 - 2123762 - T 74 -10 -3.1211 | CATGAGACTATCGAA CCACTC AAA GAGTGG AGAAATGAGATCGTT TERM 2282 2125539 - 2125560 + T 84 -10.1 -3.74693 | TTTATTATCGAGTTT GGTGACCGC CTGA GCGATCACC TTTAATACAGTGGCG TERM 2283 2125891 - 2125862 - T 86 -11.7 -3.31428 | gap 1, overlap 2125860 2125858 2125883 TTTAAATACAATAGA TAGCTCTGATTGAG TTA CT-AATCAGAGCTA CTGAGTACCTGTTTG YPO1886 2126552 - 2125983 - | hypothetical protein YPO1887 2126998 - 2126564 - | hypothetical protein YPO1889 2127649 - 2127780 + | putative transposase (partial) YPO1890 2127967 - 2128764 + | GntR-family putative transcriptional regulatory protein YPO1891 2129024 - 2128734 - | hypothetical protein TERM 2284 2129188 - 2129202 + H 72 -7.8 -3.87149 | opp_overlap 2129177, overlap 2129182 2129194 TAAAGCGAACCTTAC GCACCG TGA TGGTGC TTTGAGTTTGCTCAA TERM 2285 2129194 - 2129228 + H 100 -15.3 -3.88232 | gap 1, overlap 2129182 2129188 GAACCTTACGCACCG TGATGGTGCT-TTGAG TTTG CTCAAGAGCACCATCA TTGTTCTGTAAACGA YPO1892 2129432 - 2130445 + | putative oxidoreductase YPO1893 2130475 - 2131743 + | putative exported solute-binding protein TERM 2286 2131743 - 2131783 + F 72 -9.9 -2.77192 | gap 1, overlap 2131744 AGCGTTGTCCCGTTA ATCGCTTTCCGTCAGTGC AGTTGC GCACTGACGGAAA-TGAA ATTCTTACGCAGGTT TERM 2287 2131744 - 2131784 + F 70 -7.7 -3.6279 | gap 1, overlap 2131743 GCGTTGTCCCGTTAA TCGC-TTTCCGTCAGTGC AGTTGC GCACTGACGGAAATGAAA TTCTTACGCAGGTTT YPO1894 2131810 - 2132670 + | putative binding-protein-dependent transport system, inner membrane component TERM 2288 2133282 - 2133299 + G 70 -8.5 -3.80174 | TGACACTGTTCTTTA TCTGGAA CGAA TTCCAGA TTGTTCTAACGCTCT YPO1895 2132663 - 2133490 + | putative binding-protein-dependent transport system, inner membrane component YPO1896 2133515 - 2134405 + | putative binding-protein-dependent transport system, ATP-binding component YPO1897 2134866 - 2134642 - | hypothetical protein YPO1898 2135067 - 2134882 - | hypothetical protein YPO1899 2135488 - 2135261 - | hypothetical protein TERM 2289 2135523 - 2135541 + H 100 -13.2 -4.01078 | CCAGGGGGTAATCTG CTCTCCTG ATT CAGGAGAG TTTATGGTCACTTTT y1093 2135545 - 2136567 + | transposase for insertion sequence IS100 TERM 2290 2136648 - 2136634 - g 77 -11.4 -3.3506 | overlap 2136625 TGGAAAGCCTTATAA GCGCAG CGC CTGCGC TGTCACAACAGGCAG YPO1901 2136564 - 2137346 + | transposase/IS protein TERM 2291 2137738 - 2137713 - T 100 -10.5 -4.34402 | TGGTGCATATTAAAA TGTGCGGAG CTATTCTC CTCCGCACA TACAGATTTAACGTC YPO1902 2138526 - 2137945 - | hypothetical protein YPO1903 2138696 - 2138532 - | hypothetical protein YPO1904 2138996 - 2138715 - | putative transcriptional regulator TERM 2292 2138978 - 2139011 + g 95 -15.5 -3.31322 | opp_overlap 2138969 2138985 2138999, overlap 2138985 2138988 GAGAAAGCTGGTGAG CCCTAAATAAGGGAT GCAA AACCCTTATTTAGGG TTGTCGGCCATTACA YPO1905 2139594 - 2139040 - | hypothetical protein TERM 2293 2139259 - 2139272 + g 93 -3.8 -5.72616 | opp_overlap 2139259 ACGGGAAGGTGAAAT GGGA TGACTC TCCC TTTTTTTGTATAAAT TERM 2294 2139425 - 2139443 + g 76 -4.6 -4.96501 | ACATCTAATGCTGTG TTTTCAGG TAG TCTGGAAA TTTGTTTTTCTACGC YPO1905a 2139967 - 2139602 - | hypothetical protein TERM 2295 2139938 - 2139955 + g 83 -2.7 -5.44721 | TGACATATAATGAGT TATAAGC AATG GCTGATA TTTTTTTGACATAAT TERM 2296 2140828 - 2140808 - R 93 -11.2 -4.08945 | opp_overlap 2140808 ACTAGTGGTGTAAAA GGGATACC TTTTC GGTATCCC TTTTACAATAATCAG TERM 2297 2140808 - 2140828 + r 93 -11.2 -4.15565 | opp_overlap 2140808 ACTAGTGGTGTAAAA GGGATACC TTTTC GGTATCCC TTTTACAATAATCAG fyuA 2142861 - 2140840 - | pesticin/yersiniabactin receptor protein TERM 2298 2142660 - 2142679 + g 76 -12.8 -2.60244 | overlap 2142656 CTCTGGGGAGTTTGT CGCTGGCG GTGA CGCCGGCG TCGCTTAATTCCGGC TERM 2299 2142945 - 2142984 + r 90 -11.5 -3.72051 | overlap 2142946 2142949 2142949 ATTTCTAATAGTGGT GCTACCCGAAACGGGTT TATTTC AACCTGTTTCGGGTCGG TTTGCGCTTATTGGG TERM 2300 2142946 - 2142983 + r 100 -15 -2.82749 | overlap 2142945 2142949 2142949 TTTCTAATAGTGGTG CTACCCGAAACGGGTT TATTTC AACCTGTTTCGGGTCG GTTTGCGCTTATTGG TERM 2301 2142949 - 2142980 + r 100 -15.3 -2.66593 | overlap 2142949 2142946 2142945 CTAATAGTGGTGCTA CCCGAAACGGGTT TATTTC AACCTGTTTCGGG TCGGTTTGCGCTTAT TERM 2302 2142949 - 2142959 + r 87 -8.2 -4.43208 | overlap 2142946 2142945 2142949 CTAATAGTGGTGCTA CCCG AAA CGGG TTTATTTCAACCTGT TERM 2303 2143014 - 2143039 + r 91 -6.7 -5.46276 | opp_overlap 2143014, overlap 2143016 GCAGAATGGCGATAA CGGTCGACGGC GAGA GCCGTCAGGCG TTTTTTGTCTATCTT TERM 2304 2143016 - 2143038 + r 72 -7.7 -3.85325 | gap 1, opp_overlap 2143014, overlap 2143014 AGAATGGCGATAACG GTC-GACGGC GAGA GCCGTCAGGC GTTTTTTGTCTATCT irp5 2144569 - 2142992 - | yersiniabactin siderophore biosynthetic protein TERM 2305 2143634 - 2143624 - G 71 -6.8 -4.2349 | overlap 2143601 CCGCCATACCGAAAA CCTG TTG CAGG GTACAGTCAAAGGTG TERM 2306 2143709 - 2143727 + g 71 -10.3 -3.04461 | opp_overlap 2143705, overlap 2143711 TGCCTGAATGACGCG CAGCGAC GAAAG GTCGCTG TCTTCCCACTCCCTG irp4 2145376 - 2144573 - | yersiniabactin biosynthetic protein YbtT irp3 2146473 - 2145373 - | yersiniabactin biosynthetic protein YbtU TERM 2307 2145975 - 2145965 - G 71 -5.4 -4.48713 | GCCAGCAACAACAAA TCCA GAG TGGA GTAGAGCAACTGTCG irp1 2155961 - 2146470 - | yersiniabactin biosynthetic protein TERM 2308 2146753 - 2146773 + g 71 -7.5 -4.07885 | overlap 2146754 TTGTCGAGCCACGTT TCTGCCGCT TGC AGCGTCAGG TTTTGCGACACCATA TERM 2309 2149932 - 2149946 + g 79 -11.4 -3.61398 | ATGCCGCCGTTTTTC CAGCGC GAT GCGCTG TTCTTCCGGGGAAAG TERM 2310 2150563 - 2150573 + g 70 -2.4 -4.9725 | overlap 2150564 GCAGGAGGAATGACC GGCG TTG CGGC TTTTTCTGTGGCGCT TERM 2311 2150726 - 2150746 + g 79 -11.1 -3.55444 | overlap 2150727 ACGCGCCCATACCTC GGCTGGCGA GCG TCGCCAGCA TTTCCGGCGTGGCCG TERM 2312 2150727 - 2150745 + g 82 -14.6 -2.73124 | overlap 2150726 CGCGCCCATACCTCG GCTGGCGA GCG TCGCCAGC ATTTCCGGCGTGGCC TERM 2313 2151003 - 2150960 - G 80 -13.2 -3.02144 | gap 1 GCAGGGTTTGCAACA GCTGGCTTGCCGCCTGCGC TTTTACC GCGAAAACGGCA-GCCAGC TGGTGGTCATCAAGC TERM 2314 2151154 - 2151137 - G 70 -11.3 -2.67747 | overlap 2151136 CGCCCACATCACAAC GGCAGAC GCGC GTCTGCC CGCCCTCCACGTCGC TERM 2315 2151191 - 2151221 + g 73 -3.2 -4.96848 | gap 1, overlap 2151193 2151203 ATGACTCATCCACGC GCGGCGCCA-GCA GGGCGA TGCGTCGCGCCCC TTTTTCTCTGAGCCA TERM 2316 2153540 - 2153528 - G 74 -4.7 -4.84359 | CCATCTCCAGAAAAA CGCGG GCG CCGAG CTGATGCGCCACCTG TERM 2317 2154365 - 2154391 + g 86 -13.6 -3.64682 | CCCCCGATTTCTCAC CGGCCCAGGCGC TGA GCGCCTCGGCGG TTTCACGGTTTAATG TERM 2318 2154521 - 2154562 + g 85 -7.9 -4.84761 | gap 1, opp_overlap 2154506 2154505, overlap 2154524 2154525 CCGTCGCCAGCCGCC GCAACGCGCTGTCGCT-GGC GGC GCTGAGCAGCAGCGCGGTAC TTTTTCTGCCGCTAT TERM 2319 2154525 - 2154558 + g 73 -11.7 -2.58667 | gap 1, opp_overlap 2154506 2154505, overlap 2154524 2154521 CGCCAGCCGCCGCAA CGCGCTGTCGCT-GGC GGC GCTGAGCAGCAGCGCG GTACTTTTTCTGCCG TERM 2320 2155037 - 2155077 + g 78 -12.5 -2.93073 | overlap 2155045 2155049 TGACTGCCTGTTGCC CTGCGACGGAAGGGGCGGT ATA GCCGACCTTTCTGTTGCCG TCGTTGTTGACCGCG TERM 2321 2156026 - 2155996 - R 78 -10.5 -3.33711 | gap 1, overlap 2155991 GATTCACAAAGTCAA TGGAACGCCAT-GC GTTC GCGATGGCGTTCCG GGGAAAATCAGTTTG irp2 2162156 - 2156049 - | yersiniabactin biosynthetic protein TERM 2322 2156349 - 2156391 + g 75 -10.5 -3.34398 | gap 1, overlap 2156347 GTGTGGCTGAGAGTG CTCAGGGCATACGCGCGGTG AGCG CTCTGCGCAT-TGCCCTGCG TGTTTAACGGGAGGC TERM 2323 2156420 - 2156437 + g 70 -8.3 -3.78775 | GCACCAGCGCGGCGA GCGGCAG TTGC CAGCCGC TTTCATCCTCGGCCA TERM 2324 2156978 - 2156945 - G 74 -9.5 -3.60525 | overlap 2156966 2156969 TCCATGCAGAGAGAA CCGTTGACCACACCG ACAA CAGTACGGCCGACGG GGTGAGATGGGCGTC TERM 2325 2156986 - 2157002 + g 87 -7.2 -5.0133 | opp_overlap 2156969 2156966, overlap 2156987 GCCGACGGGGTGAGA TGGGCG TCAGC CGCCCG TTTTTTCAGCCGATG TERM 2326 2157895 - 2157923 + g 76 -6 -4.70659 | gap 1, opp_overlap 2157897 2157899, overlap 2157898 2157899 ACATTGCCAGTTGAT AAGAGTTGCTGCC AGAG GGCGGCAAC-CTG TTTTTCAATGTCGCC TERM 2327 2157898 - 2157921 + g 77 -8.8 -3.96999 | opp_overlap 2157897 2157899, overlap 2157895 2157899 TTGCCAGTTGATAAG AGTTGCTGCC AGAG GGCGGCAACC TGTTTTTCAATGTCG TERM 2328 2157920 - 2157899 - G 70 -10.1 -3.23393 | opp_overlap 2157899 2157898 2157895, overlap 2157897 TGCCAGTTGATAAGA GTTGCTGCC AGAG GGCGGCAAC CTGTTTTTCAATGTC TERM 2329 2157899 - 2157920 + g 76 -12.3 -2.97476 | opp_overlap 2157897 2157899, overlap 2157898 2157895 TGCCAGTTGATAAGA GTTGCTGCC AGAG GGCGGCAAC CTGTTTTTCAATGTC TERM 2330 2159453 - 2159471 + g 71 -10.2 -3.14132 | CACCCGGCACCCAGT CAGGGCAG TCC CGGCCCTG TTCATCCACCACCCG TERM 2331 2160241 - 2160221 - G 70 -8.2 -3.6682 | overlap 2160233 GCTGATCCAGCGAAA CCGGAACG TAAAC CGCCCCGG CCAGCAGGACGGCCA TERM 2332 2160253 - 2160233 - G 70 -8.2 -3.77241 | overlap 2160221 AAACCGGAACGTAAA CCGCCCCG GCCAG CAGGACGG CCAGAACCGCAACAA TERM 2333 2162232 - 2162242 + r 87 -8.2 -4.55697 | opp_overlap 2162223, overlap 2162232 2162239 AACAATTGGATGCTA CCCG AAA CGGG TTTATTTATGCCCGT TERM 2334 2162232 - 2162263 + r 100 -15.2 -3.14132 | opp_overlap 2162223, overlap 2162232 2162239 AACAATTGGATGCTA CCCGAAACGGGTTT ATTT ATGCCCGTTTCGGG TTGGTAACAGGCGGA TERM 2335 2162314 - 2162284 - R 100 -21.3 -3.93658 | opp_overlap 2162288 AACAGGCGGAAAGAA CAGAGGCCCGGAT GGGGT ATCCGGGCCTCTG TCAGGGAGGAGTTTA TERM 2336 2162288 - 2162310 + r 100 -15.6 -2.87132 | opp_overlap 2162284 GGCGGAAAGAACAGA GGCCCGGATG GGG TATCCGGGCC TCTGTCAGGGAGGAG ybtA 2163306 - 2162347 - | transcriptional regulator YbtA TERM 2337 2163598 - 2163608 + G 74 -4.6 -4.85599 | GGCATTAACCAGCCT GGGG GCG CTCC TTTTTCTGGCGTGGA irp6 2163473 - 2165275 + | lipoprotein inner membrane ABC-transporter TERM 2338 2165337 - 2165372 + G 81 -13.4 -3.14881 | gap 1 TCCAGCGTTGGCAGT CAG-GCCAGGATGCTGC GAC GCAGTATGCTGGCGCTG TTGCTGGCGGCATTC TERM 2339 2165880 - 2165848 - g 72 -8.5 -3.86346 | gap 1, overlap 2165849 2165852 CGATGCGGCGACAAA TGCAGACGCTGGGG GAAGCG CACCAGCGTCTG-A GCGGCGATATCGTTG irp7 2165262 - 2167064 + | inner membrane ABC-transporter YbtQ irp8 2167057 - 2168337 + | putative signal transducer ybtS 2168365 - 2169669 + | salicylate synthase Irp9 TERM 2340 2169804 - 2169832 + T 74 -10.3 -2.72829 | opp_overlap 2169809, overlap 2169803 2169809 TGATAAAAGTCTATA TAGAACCACCTCC TGT GGAGGTGGTGGTA ATTTGCCAGAGTGTG TERM 2341 2169827 - 2169809 - T 100 -14.6 -3.60814 | opp_overlap 2169804 2169803 2169809 AAAGTCTATATAGAA CCACCTCC TGT GGAGGTGG TGGTAATTTGCCAGA TERM 2342 2169809 - 2169830 + T 73 -10.1 -2.90813 | opp_overlap 2169809, overlap 2169804 2169803 AAAGTCTATATAGAA CCACCTCCT GTGG AGGTGGTGG TAATTTGCCAGAGTG int 2171125 - 2169863 - | integrase TERM 2343 2170278 - 2170290 + g 71 -5.5 -4.56597 | opp_overlap 2170278, overlap 2170273 GAGAGGGGGACGATA TGCGG CAT TCGCA TTTTTGCCCCGCGGC YPO1918 2172405 - 2171665 - | probable pili assembly chaperone TERM 2344 2171912 - 2171926 + g 76 -5.8 -4.65895 | opp_overlap 2171911 2171914 TTCGCGATTATAACG TATTGA TTA TCAATA TTTTTAAGTGAAAAC YPO1919 2173751 - 2172402 - | hypothetical protein YPO1920 2176358 - 2173767 - | probable fimbrial usher protein TERM 2345 2174021 - 2174032 + g 73 -5.8 -4.52781 | CCATAGGCAATTGGC TGCC ATCG GGCA TTTTAATTGTGATTA TERM 2346 2175635 - 2175609 - G 70 -2.9 -4.87273 | AAGACTGGAGAAAAA CTGGCCGGAAC TGAAG GTTTCACCCAG CGTAATTTCACTGCC YPO1921 2177051 - 2176407 - | probable pili assembly chaperone YPO1922 2177674 - 2177144 - | fimbrial protein TERM 2347 2178025 - 2178009 - R 100 -5.8 -6.23209 | opp_overlap 2178009 TGAATCAAAAAAAAA CGCCAA GAAGA CTGGCG CTTTTAATAGGGGAA TERM 2348 2181013 - 2180998 - R 71 -3.2 -4.99638 | AGATCGACAGAAAAA CCGG CCATTTCT CCGG TCCGGCGGTCACGGA TERM 2349 2181954 - 2181930 - R 81 -12.2 -2.52491 | overlap 2181929 TAGAGACGCATGAAG CTGCCCGCTA ATCAG TAGCAGGCAG TAGAGTACGGTACGT YPO1925 2182644 - 2182012 - | putative two-component response regulator YPO1926 2184792 - 2183470 - | putative 4-hydroxybutyrate coenzyme A transferase YPO1927 2185357 - 2184815 - | putative transcription regulatory protein TERM 2350 2185444 - 2185420 - R 100 -13.6 -3.01416 | gap 1, overlap 2185410 TATCAGGCAGAGATA CCCGCTCGGGT AAGT ACCCG-GCGGG CCTGACGTGCAACAG YPO1928 2186249 - 2185407 - | putative citrate lyase beta chain TERM 2351 2186284 - 2186318 + H 78 -9.4 -3.61541 | overlap 2186282 CGCTTAGTCTATGGT CGCCGTTATCATTTAT CCA ATATATGATACCGGTG TGTTTAATTGCTTTT TERM 2352 2187165 - 2187187 + G 100 -16.3 -3.03635 | GCTCGCGTTGGCGTA CCGGCGAGG GGATA CCTCGCCGG TATTAAGAAACTTTG YPO1929 2186344 - 2187222 + | probable LysR-family transcriptional regulator TERM 2353 2187293 - 2187281 - T 71 -3.3 -5.03145 | overlap 2187282 CAATCGGTTAAAAAA CGCCC CAA GAGCA AAATTATTGGCTATC YPO1930 2187770 - 2187297 - | putative lipoprotein TERM 2354 2187546 - 2187524 - G 74 -2 -5.10208 | overlap 2187526 CAATGGGAATAAAAA CATTCCAC TCGCCTT GCGGAATA AACGAGAAATGTCCC YPO1931 2188355 - 2187795 - | hypothetical protein YPO1932 2189804 - 2188575 - | putative sugar transporter TERM 2355 2189302 - 2189261 - G 71 -5.7 -4.33274 | opp_overlap 2189288, overlap 2189289 TGTAGAGTACTAAAA GGGCGGGAAGCACACCAAT CCAG AATAATGCGCGCCACGCCC ACTCCTCTGATAGTA TERM 2356 2189832 - 2189858 + r 73 -2.5 -5.16681 | gap 2, overlap 2189837 TACAGACTGGCTTTT TAACTCTTGTGAG CAC CTCACA--AGTTA TTTTGTTATTTTTAA TERM 2357 2189837 - 2189855 + r 100 -11.8 -4.59946 | overlap 2189832 ACTGGCTTTTTAACT CTTGTGAG CAC CTCACAAG TTATTTTGTTATTTT YPO1933 2190739 - 2189870 - | putative dicarboxylic acid hydrolase TERM 2358 2191374 - 2191392 + G 70 -11 -2.52464 | opp_overlap 2191374 2191372 CGACGTTAGCAAATA CTGTCGGT ACC GCCGACAG TGCGTTACGGCAGGC TERM 2359 2191392 - 2191374 - g 75 -10.3 -3.4582 | opp_overlap 2191374, overlap 2191372 CGACGTTAGCAAATA CTGTCGG TACCG CCGACAG TGCGTTACGGCAGGC YPO1934 2190851 - 2191813 + | putative LysR-family transcriptional regulatory protein YPO1935 2192717 - 2192118 - | Na(+)-translocating NADH-quinone reductase subunit E TERM 2360 2192346 - 2192336 - G 79 -5.4 -4.98255 | GCTGAACCATAAAAA TGGT TGC ACCA AATATTGCACAGTGG YPO1936 2193069 - 2194229 + | putative aminotransferase ansP 2195951 - 2194425 - | L-asparagine permease TERM 2361 2195745 - 2195733 - G 73 -2.7 -4.93365 | CCGGAGAATGAAAAA TGAAA AAA TTCCA CAAACCAGATAAACC TERM 2362 2196361 - 2196395 + r 73 -3.7 -4.96845 | TTATATTGCATTTTA TCTTATTTCATATGT ATCTA ACCCATGGAATAAGA TTTATTTATTTTTAT YPO1938 2197446 - 2196676 - | probable deoR-family transcriptional regulatory protein TERM 2363 2197096 - 2197063 - G 70 -4.7 -4.7373 | GGATTCGATCAAAAA GTTAGCAATAACAAA GTCG TTGGTTACCACTAAC AGATCATCTCTGTCC YPO1939 2198642 - 2199664 + | glutaminase TERM 2364 2200608 - 2200595 - g 79 -8.1 -4.30416 | AGGAGCAAGGTAAAA CGCCA TTAC TGGCG CTAGACGTGATTACA TERM 2365 2201288 - 2201275 - g 72 -8.1 -3.81146 | CGGGTGAATGAAGAA GCACG GTTA CGTGC GCTGAAATTCGGTTT YPO1940 2199775 - 2201415 + | hypothetical protein TERM 2366 2201424 - 2201404 - f 84 -5.4 -5.25803 | overlap 2201392 2201405 AATCTGGATAAAAAA GCCAGCAA GTAAG TTGCTGGA GGTTATTGACAAAGT TERM 2367 2201423 - 2201405 - f 78 -8.9 -3.74397 | overlap 2201392 2201404 ATCTGGATAAAAAAG CCAGCAA GTAAG TTGCTGG AGGTTATTGACAAAG TERM 2368 2201499 - 2201525 + F 72 -10.1 -2.88849 | gap 1, opp_overlap 2201488, overlap 2201494 2201500 ACATCCATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCTCTGCC TERM 2369 2201500 - 2201526 + F 84 -10.1 -3.82218 | gap 1, opp_overlap 2201488, overlap 2201494 2201499 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCTCTGCCT TERM 2370 2201605 - 2201615 + F 70 -2.6 -5.07567 | GCAAGTAAGTTGCTG TTAA AAT TTAA TTTTTTGAAATATAA TERM 2371 2201682 - 2201650 - f 91 -12.8 -2.88887 | gap 1, opp_overlap 2201650, overlap 2201646 2201669 TTGAAATAAAAGTGA CTGGCAGTGTGTTGC GAAA GCAGC-CACTGCCAG TTTTTTCTTTCTGGC TERM 2372 2201650 - 2201682 + F 100 -15 -5.72622 | gap 1, opp_overlap 2201650 2201646 2201669 TTGAAATAAAAGTGA CTGGCAGTGTGTTGC GAAA GCAGC-CACTGCCAG TTTTTTCTTTCTGGC TERM 2373 2201863 - 2201878 + F 71 -3.2 -5.00884 | opp_overlap 2201863 ATTGGTGGGGTAAAT TGCGCA TCAG TACGCA TTTTTTGAAAAAAAT TERM 2374 2202252 - 2202237 - g 76 -4.6 -5.00616 | TCTCCGCGCAAAAAA GCTTCC AGAT GGAGGC GGCCTTTGGCGAAAT TERM 2375 2202329 - 2202318 - g 70 -3 -4.77567 | ATGTCGATAATAAAA TCAA TTGG TTGA AAGGCGAACTAACGG TERM 2376 2202901 - 2202882 - g 74 -7.8 -4.26461 | AGCAAGGGAAAATAA CACCGGCA ATGA TGGCGGTG CAGGATGCCTACTTT YPO1941 2201996 - 2203915 + | hypothetical protein YPO1942 2204119 - 2204646 + | hypothetical protein TERM 2377 2205318 - 2205333 + G 73 -9 -3.69333 | ATTGCTCAATCTGGC TGCCAC CGTG GTGGCA TTTGGCTGGGTTATA YPO1943 2204947 - 2206356 + | hypothetical protein YPO1944 2206359 - 2207651 + | hypothetical protein TERM 2378 2208388 - 2208406 + G 70 -8.8 -3.62046 | opp_overlap 2208385 2208388, overlap 2208389 CCAATTCGCAAAGTA TCTGCCTC TGA GGGGCAGG TTCTTGACAAGATAA TERM 2379 2208545 - 2208535 - g 76 -6.8 -4.56597 | overlap 2208536 TTTGCGTTGCAAAAA GCAC TGG GTGC CAGTGGGCGTGACAT TERM 2380 2208550 - 2208536 - g 70 -10 -3.33744 | overlap 2208535 TTGCGTTGCAAAAAG CACTGG GTG CCAGTG GGCGTGACATTATCC TERM 2381 2208728 - 2208745 + G 70 -9.1 -3.61398 | TGCTTTCGTTGTTTG TTGCCGC TGTG GCGGCGA TTGTTCCCACCCGAC YPO1945 2207641 - 2208804 + | hypothetical protein YPO1946 2208808 - 2209521 + | ABC transporter, ATP-binding protein YPO1947 2209511 - 2210008 + | putative thioredoxin YPO1948 2210008 - 2210319 + | putative cytochrome TERM 2382 2211147 - 2211120 - g 76 -8.6 -4.1523 | TGCAACCAGAAAGAA TCCCACATATTA TCAG TAATATGCAGGA GTGTACTTTACCCGG tehB 2210492 - 2211379 + | tellurite resistance protein TehB TERM 2383 2211874 - 2211850 - g 80 -2.8 -5.32882 | gap 1, overlap 2211851 2211852 CATCATTATAAAAAA CGTGATCGGCC TATT GGCCCACCA-G TGGAAGCGGTCTTTA YPO1950 2211520 - 2212737 + | putative peptidase TERM 2384 2215442 - 2215456 + G 85 -7.8 -4.84359 | opp_overlap 2215424 2215441 TGATGCTGAACTTAG CGTGAC GCC GTCGCG TTTTTCTGACGGTAA hmsH 2213406 - 2215874 + | outer membrane protein PgaA TERM 2385 2216541 - 2216529 - g 76 -3.4 -5.09259 | GATCCCAAAACAAAA CAGT ATGAA ACTG TTGAAGCCTTTAAGC hmsF 2215887 - 2217908 + | haemin storage system, HmsF protein hmsR 2217898 - 2219232 + | N-glycosyltransferase PgaC TERM 2386 2219379 - 2219404 + G 77 -10.5 -3.54459 | CATATGGGGCCGATA CCGTTGAGGAT TTAT ATTCTCAGCGG TTTGACGACGATTGC hmsS 2219229 - 2219696 + | haemin storage system, HmsS protein YPO1955 2220029 - 2220928 + | putative acetyltransferase TERM 2387 2221412 - 2221402 - g 78 -4 -5.07652 | GCTGTTAAAACAAAA TCAA AGA TTGA CTCAAGCGACTCGTT YPO1956 2221367 - 2221645 + | hypothetical protein phoH 2221705 - 2222493 + | hypothetical protein TERM 2388 2222552 - 2222576 + T 100 -16.5 -3.92324 | opp_overlap 2222552 AGAATACACAAAAAA GGGCAAGCGTT AAC AGCGCTTGCCC TTTGCTATTCAGACG TERM 2389 2222576 - 2222552 - T 100 -14.3 -5.48787 | opp_overlap 2222552 AGAATACACAAAAAA GGGCAAGCGTT AAC AGCGCTTGCCC TTTGCTATTCAGACG chaA 2223696 - 2222596 - | calcium/sodium:proton antiporter TERM 2390 2223747 - 2223733 - R 75 -8.5 -3.74693 | CTTTACTGTATTAAA CGGGC ATTAG GCCCG GTTAACGATAAATAA narX 2226026 - 2224245 - | nitrate/nitrite sensor protein NarX TERM 2391 2227543 - 2227505 - g 71 -5.3 -4.57837 | opp_overlap 2227514 2227516, overlap 2227513 2227514 2227516 ACACTTCCCCAAAAA CATCAAAATCAGCCACC CCGCT GGCGGCTATTTCTTATG GTTAGAATTGGAGCC YPO1960 2226336 - 2227757 + | putative GntR-family regulatory protein YPO1961 2227999 - 2228196 + | hypothetical protein argD 2228394 - 2229638 + | bifunctional succinylornithine transaminase/acetylornithine transaminase TERM 2392 2229639 - 2229627 - f 74 -6.3 -4.57073 | opp_overlap 2229627 2229626, overlap 2229629 CAGGTTTGTCAAAAA GTTAC GTC GTAAC GTTTATGCCGTAGGC astA 2229668 - 2230720 + | arginine succinyltransferase TERM 2393 2230891 - 2230904 + G 80 -9.5 -4.09685 | ACTCTGGCCTGCCAT GCCGC AAGA GCGGC TTTTCCGGCATGGGC TERM 2394 2231130 - 2231120 - g 70 -8.2 -3.70902 | CCGGCCATAGCCAAA CCCC AAT GGGG GACAGCATGTCAGTG astD 2230717 - 2232234 + | succinylglutamic semialdehyde dehydrogenase TERM 2395 2232368 - 2232392 + G 83 -12.9 -3.63515 | opp_overlap 2232356 AAATCGTACTTCCAA CCCTCGTTTGG CAG CCAAACAAGGG TTATTGAAGATGAAA TERM 2396 2232446 - 2232435 - g 71 -7.2 -4.07877 | TTAGGCTACAAACAA GGGG TTCT CCCC CCTCAGGAGCGGCCG astB 2232258 - 2233601 + | succinylarginine dihydrolase astE 2233662 - 2234654 + | succinylglutamate desuccinylase TERM 2397 2236329 - 2236347 + F 100 -13.2 -4.01078 | CCAGGGGGTAATCTG CTCTCCTG ATT CAGGAGAG TTTATGGTCACTTTT y1093 2236351 - 2237397 + | transposase for insertion sequence IS100 TERM 2398 2237451 - 2237437 - g 77 -11.4 -3.3506 | overlap 2237428 TGGAAAGCCTTATAA GCGCAG CGC CTGCGC TGTCACAACAGGCAG YPO1969 2237397 - 2238149 + | transposase/IS protein TERM 2399 2238404 - 2238422 + T 71 -4.6 -4.58395 | CGGATGATGTTGTTG CGGTAA ACTTGAC TTACCG TTTTTAAGCAGTAGA TERM 2400 2238582 - 2238550 - T 70 -5.6 -4.3207 | gap 1, opp_overlap 2238558, overlap 2238552 2238558 ATAGAAAGATAGAAA GATAGAAAGGCGGGG GAAA CCCCGTCTTTTTA-C TGTGAGCTGTAAACC TERM 2401 2238581 - 2238552 - T 81 -9.3 -3.74227 | opp_overlap 2238558, overlap 2238550 2238558 AGAAAGATAGAAAGA TAGAAAGGCGGGG GAAA CCCCGTCTTTTTA CTGTGAGCTGTAAAC TERM 2402 2238558 - 2238575 + T 100 -10.5 -4.80882 | opp_overlap 2238558 2238552 2238550 ATAGAAAGATAGAAA GGCGGGG GAAA CCCCGTC TTTTTACTGTGAGCT TERM 2403 2238575 - 2238558 - T 82 -8.3 -4.3207 | opp_overlap 2238558, overlap 2238552 2238550 ATAGAAAGATAGAAA GGCGGGG GAAA CCCCGTC TTTTTACTGTGAGCT hutG 2239532 - 2238726 - | putative N-formylglutamate amidohydrolase hutI 2240749 - 2239529 - | imidazolonepropionase TERM 2404 2240904 - 2240882 - R 70 -7.1 -3.9009 | AACCTAGCCTATAAA TTCACTATC AGCAA GATAGCGAA TTCACAATTGCGTAA hutC 2241720 - 2240953 - | putative GntR-family transcriptional regulatory protein YPO1974 2241868 - 2243238 + | N-formimino-L-glutamate deiminase YPO1975 2243238 - 2243810 + | hypothetical protein YPO1976 2245964 - 2243988 - | hypothetical protein TERM 2405 2244087 - 2244115 + g 76 -5.3 -4.89477 | GTCTGCTTGATGGGT GATTTCGGTTCCG GCT CGTAATCCAAATC TTTTATTCTTACGGG YPO1979 2247623 - 2248639 + | putative dehydrogenase YPO1980 2248632 - 2249438 + | hypothetical protein YPO1981 2249435 - 2250721 + | putative coenzyme synthetase TERM 2406 2250895 - 2250914 + G 73 -9.2 -3.727 | CATCGGGGTTTATTG GCGGGGCA TTTA TGCGCCGC TTTGCCTGTCATGAC YPO1982 2250855 - 2251817 + | putative dehydrogenase YPO1983 2251817 - 2252971 + | putative glycosyl transferase TERM 2407 2253500 - 2253512 + G 73 -5.5 -4.63486 | ACCCAGCATTACTGA CGCTT TGT GAGCG TTTTATTGCGGCAGT YPO1984 2252968 - 2253552 + | hypothetical protein YPO1985 2253549 - 2254736 + | putative glycosyl transferase YPO1986 2255361 - 2254897 - | hypothetical protein TERM 2408 2255494 - 2255472 - R 77 -6.3 -4.65933 | CATCTTTAAAAGAAA GCAGACAAC ATTTA ATTGCCTGC TCCTCAATATTGCCA YPO1987 2257189 - 2255531 - | hypothetical protein TERM 2409 2257248 - 2257232 - H 78 -2.3 -5.49809 | TAAAGTTGAAAAAAA GTTTAGA GAC TGTAAAC AATATTGTGTAATTG TERM 2410 2258490 - 2258511 + G 77 -10.1 -3.74693 | TTTATTATCGAGTTC GGTGACCGC CTGA GCGATCACC TTTAATACGGTGGCA y1062 2257308 - 2258516 + | transposase for the IS285 insertion element YPO1989 2260798 - 2258636 - | hypothetical protein YPO1990 2261376 - 2263487 + | hypothetical protein YPO1991 2263734 - 2264372 + | hypothetical protein YPO1992 2265166 - 2264507 - | hypothetical protein YPO1993 2265951 - 2265271 - | putative dehydrogenase TERM 2411 2266015 - 2265986 - R 87 -8.5 -4.57353 | gap 1, opp_overlap 2265986 GGCTATTAGATAAAA GCCGGGTGTGA-GA AGA CCGCCACTCCCGGC TTGAGTCACTAAGTT TERM 2412 2266298 - 2266280 - R 70 -9.6 -2.78695 | opp_overlap 2266279 2266278, overlap 2266279 TTGAGATAAAGTAAT CCGCTAAC TAT ATTAGCGG GGTTTTGGACTCATG YPO1994 2267242 - 2266292 - | hypothetical protein YPO1995 2268161 - 2267229 - | hypothetical protein TERM 2413 2267398 - 2267414 + g 84 -2.2 -5.59357 | overlap 2267390 GCTTTATGATTGTGT GCGATC TTTTC GATAGC TTTTTTTGATCTCAT YPO1996 2269072 - 2268167 - | hypothetical protein TERM 2414 2269742 - 2269773 + r 84 -10.9 -3.63515 | opp_overlap 2269741 2269740 GGCAACGAAGTAAGT CCCCAGGCGCTTA CATAAA TAAGTACCTGGGG TTGTTGAGCGTAGCC TERM 2415 2269828 - 2269855 + r 85 -4 -5.5112 | opp_overlap 2269828 2269825, overlap 2269829 ACGAGTATATAAGCA GTAGTGGAGCCG TCAA CGACCCCACTAA TTTTTTATTACTGAA TERM 2416 2269829 - 2269854 + r 70 -7.5 -3.89587 | opp_overlap 2269828 2269825, overlap 2269828 CGAGTATATAAGCAG TAGTGGAGCCG TCAA CGACCCCACTA ATTTTTTATTACTGA YPO1997 2270936 - 2269863 - | hypothetical protein TERM 2417 2270331 - 2270321 - G 70 -3.2 -4.87133 | AGTGTGTAAACAAAA TAGC CGG GCCA GATTTATCCACTACG YPO1998 2271619 - 2271149 - | hypothetical protein YPO1999 2272096 - 2271674 - | putative decarboxylase TERM 2418 2272275 - 2272251 - R 82 -8.6 -4.30104 | opp_overlap 2272256, overlap 2272248 2272254 TAAAGCAAGAAAGAA GAAGAGGAGG GAGAT CCTCCTCTTA AACCTGTATGCAAAA TERM 2419 2272272 - 2272254 - R 91 -10.3 -4.22676 | opp_overlap 2272256, overlap 2272248 2272251 AGCAAGAAAGAAGAA GAGGAGG GAGAT CCTCCTC TTAAACCTGTATGCA YPO2000 2273764 - 2272373 - | putative two-component system sensor protein TERM 2420 2273075 - 2273098 + g 70 -4.4 -4.67904 | overlap 2273077 TTCCTGCCGTTCGAG CACGCCGTTG AATG CGACGGCCAG TTTTTGCAGTTCATC copR 2274462 - 2273770 - | transcriptional activator TERM 2421 2273863 - 2273874 + g 76 -7.2 -4.3739 | GGGCGTATCTATTTT CGCC CGCA GGCG TTTTATCGCCACCTC TERM 2422 2274544 - 2274573 + H 93 -8.7 -4.46112 | overlap 2274546 2274547 2274555 2274567 CCAACACCAGGCTGA CATTTTCCTGACA TTTT TGTCAGGAAAGTA TTTCTTTAACTGACA TERM 2423 2274546 - 2274571 + H 95 -11.3 -3.83744 | overlap 2274544 2274547 2274555 2274567 AACACCAGGCTGACA TTTTCCTGACA TTTT TGTCAGGAAAG TATTTCTTTAACTGA TERM 2424 2274547 - 2274570 + H 89 -12.6 -2.89523 | overlap 2274546 2274544 2274555 2274567 ACACCAGGCTGACAT TTTCCTGACA TTTT TGTCAGGAAA GTATTTCTTTAACTG YPO2002 2274727 - 2275818 + | hypothetical protein YPO2003 2275967 - 2276674 + | flavodoxin TERM 2425 2277112 - 2277126 + G 79 -7.1 -4.73682 | opp_overlap 2277111, overlap 2277091 TTTTTCTGTAAAATC TGGCG TATTT CGCCA TTTTCTCTTCTGGCG TERM 2426 2277183 - 2277193 + G 70 -3.2 -4.88736 | CAGTATTGTGGTATA CGGA GTG TCTG TTTTTATGGGTCGTG YPO2004 2276689 - 2277384 + | hypothetical protein YPO2005 2278435 - 2277593 - | hypothetical protein TERM 2427 2278463 - 2278480 + H 79 -7 -4.58242 | opp_overlap 2278463, overlap 2278458 TATGAAAACAAAAAA TCCACG CAAGCA CGTGGA TTTTATCGGTTTTTT TERM 2428 2278480 - 2278463 - H 100 -7.7 -5.83211 | opp_overlap 2278463 2278458 TATGAAAACAAAAAA TCCACGC AAGC ACGTGGA TTTTATCGGTTTTTT YPO2006 2279186 - 2279722 + | hypothetical protein YPO2007 2279719 - 2280549 + | putative esterase YPO2008 2280557 - 2280955 + | putative rhodanese-like protein TERM 2429 2281004 - 2281036 + T 100 -16.5 -3.63744 | opp_overlap 2281009, overlap 2281009 GACACTTTTTTGCCT TAAAACGCCTGATGA ACT TCATCGGGCGTTTTG TATTTTAACGACAGA TERM 2430 2281031 - 2281009 - T 100 -12 -4.07568 | opp_overlap 2281004 2281009 TTTTTTGCCTTAAAA CGCCTGATGA ACT TCATCGGGCG TTTTGTATTTTAACG TERM 2431 2281009 - 2281031 + T 100 -14.2 -4.89567 | opp_overlap 2281009, overlap 2281004 TTTTTTGCCTTAAAA CGCCTGATGA ACT TCATCGGGCG TTTTGTATTTTAACG YPO2009 2281512 - 2281003 - | putative integrase core domain protein YPO2009a 2281844 - 2281530 - | hypothetical protein TERM 2432 2282061 - 2282078 + r 100 -11.3 -4.47485 | opp_overlap 2282061 CTATGAAAACAAAAA TCCACGC AATT GCGTGGA TTTTATAGCATTTTT TERM 2433 2282078 - 2282061 - R 100 -11.3 -5.50723 | opp_overlap 2282061 CTATGAAAACAAAAA TCCACGC AATT GCGTGGA TTTTATAGCATTTTT ychF 2283232 - 2282141 - | translation-associated GTPase pth 2283986 - 2283396 - | peptidyl-tRNA hydrolase TERM 2434 2283552 - 2283536 - G 74 -7.3 -4.18018 | opp_overlap 2283536 GGGGTTTACCCAAAA CAAAGCC AGT GACTTTG CTTTTATCACCAGGA TERM 2435 2284121 - 2284151 + H 93 -12.1 -3.68836 | opp_overlap 2284116 AAAAATAATTGTATA GTTGAATGATTTC CCTTC GGAATCATTCAAC TTCTTGGCTAAATAT YPO2012 2284348 - 2284620 + | hypothetical protein TERM 2436 2284687 - 2284652 - T 80 -9 -3.92577 | opp_overlap 2284657, overlap 2284657 GAATCTTCAAAAACA GAAAACCCGTTGTCGC ACAG GCTTCAACGGGTTTTT CTTTATCTGCTTCAA TERM 2437 2284682 - 2284657 - T 100 -8.9 -4.98672 | opp_overlap 2284657, overlap 2284652 TTCAAAAACAGAAAA CCCGTTGTCGC ACAG GCTTCAACGGG TTTTTCTTTATCTGC TERM 2438 2284657 - 2284682 + T 100 -8.9 -5.42975 | opp_overlap 2284657 2284652 TTCAAAAACAGAAAA CCCGTTGTCGC ACAG GCTTCAACGGG TTTTTCTTTATCTGC prsA 2285769 - 2284822 - | ribose-phosphate pyrophosphokinase ipk 2287009 - 2286110 - | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase lolB 2287634 - 2287011 - | outer membrane lipoprotein LolB hemA 2287940 - 2289202 + | glutamyl-tRNA reductase TERM 2439 2289591 - 2289610 + G 79 -7.1 -4.60487 | opp_overlap 2289579, overlap 2289593 AATCCGCGCGGGGAC TGGCGGC GATGAA GCCGCTA TTTTTGCCGGTGATA prfA 2289235 - 2290317 + | peptide chain release factor 1 YPO2018 2290317 - 2291147 + | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase YPO2019 2291211 - 2291612 + | hypothetical protein YPO2020 2291609 - 2292418 + | putative transcriptional regulator kdsA 2292514 - 2293368 + | 2-dehydro-3-deoxyphosphooctonate aldolase TERM 2440 2293510 - 2293487 - f 100 -11 -5.46657 | overlap 2293501 2293505 TAGGGCAATAAAAAA GGCAGCGTAG GCAA CTAAGCTGCC TCAGACTGCTGACAA TERM 2441 2293599 - 2293573 - f 84 -10.1 -3.82218 | gap 1, opp_overlap 2293582, overlap 2293574 2293589 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 2442 2293600 - 2293574 - f 72 -10.1 -2.88849 | gap 1, opp_overlap 2293582, overlap 2293573 2293589 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT TERM 2443 2293678 - 2293701 + F 75 -5.2 -4.82901 | opp_overlap 2293673, overlap 2293679 TTGTCAATAACCTCA CGCAGCGTAG GTAA CTAAGCTGCC TTTTTGTGCCCAGAA TERM 2444 2293679 - 2293700 + F 73 -8.7 -3.49419 | opp_overlap 2293673, overlap 2293678 TGTCAATAACCTCAC GCAGCGTAG GTAA CTAAGCTGC CTTTTTGTGCCCAGA TERM 2445 2293719 - 2293737 + F 100 -16 -3.07307 | opp_overlap 2293719 TTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC TERM 2446 2293737 - 2293719 - f 100 -16 -4.36914 | opp_overlap 2293719 TTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC tnp 2293850 - 2294308 + | transposase for the IS1541 insertion element TERM 2447 2294386 - 2294410 + T 100 -9.9 -4.51743 | opp_overlap 2294389, overlap 2294388 2294389 ATAGGCGCATATGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTTGATAATCA TERM 2448 2294388 - 2294408 + T 100 -12.5 -3.86206 | opp_overlap 2294389, overlap 2294386 2294389 AGGCGCATATGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTTGATAAT TERM 2449 2294389 - 2294407 + T 100 -16 -2.90639 | opp_overlap 2294389, overlap 2294388 2294386 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTGATAA TERM 2450 2294407 - 2294389 - T 100 -16 -4.8048 | opp_overlap 2294389 2294388 2294386 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTGATAA YPO2025 2295710 - 2294928 - | transposase/IS protein TERM 2451 2295626 - 2295640 + g 77 -11.4 -3.3506 | overlap 2295639 CTGCCTGTTGTGACA GCGCAG GCG CTGCGC TTATAAGGCTTTCCA y1093 2296729 - 2295707 - | transposase for insertion sequence IS100 TERM 2452 2296751 - 2296733 - R 100 -13.2 -4.01078 | AAAAGTGACCATAAA CTCTCCTG AAT CAGGAGAG CAGATTACCCCCTGG YPO2027a 2298623 - 2298327 - | hypothetical protein TERM 2453 2298910 - 2298889 - R 100 -6.5 -5.95166 | TGTAACCAAAAAAAA GGCCCCGAC TTTC GTCAGAACC TTATTTTTGAATTTG TERM 2454 2299012 - 2299049 + r 88 -12.7 -2.62184 | CACTCAGACACCTCA CCGTTTCGTTGCGCCGT TATA GTGGTGCAACGGGGCGG TACTATAGGGGGCGA TERM 2455 2299173 - 2299159 - R 74 -10 -3.18452 | ATTAGGTGAATTTAA CGCCAA TTT TTGGCG GTGGCGGGGGAGTCA YPO2028 2300030 - 2299155 - | hypothetical protein TERM 2456 2300243 - 2300215 - R 75 -10.3 -2.87564 | overlap 2300235 TCATTCGCTGATACA GTCGCCGTTTCGT CGA ACAATACAGCGAC TGTACCCGCCAAGGA YPO2029 2301413 - 2300331 - | hypothetical protein YPO2030 2302269 - 2301433 - | putative binding-protein-dependent transport system membrane protein YPO2031 2303132 - 2302266 - | putative binding-protein-dependent transport system membrane protein TERM 2457 2302469 - 2302458 - G 85 -7.2 -4.87665 | GGCGACCGAGAAAAA GGCG AAAT CGCC CAGTGCACCGATAAA TERM 2458 2303921 - 2303903 - H 100 -16 -4.36914 | opp_overlap 2303903 TTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC TERM 2459 2303903 - 2303921 + H 100 -16 -3.07307 | opp_overlap 2303903 TTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC tnp 2304034 - 2304492 + | transposase for the IS1541 insertion element TERM 2460 2304570 - 2304594 + F 93 -9.9 -4.3953 | opp_overlap 2304573, overlap 2304572 2304573 ATAGGCGCATATGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTCTGCTTCAG TERM 2461 2304572 - 2304592 + F 100 -12.5 -3.79611 | opp_overlap 2304573, overlap 2304570 2304573 AGGCGCATATGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTCTGCTTC TERM 2462 2304573 - 2304591 + F 100 -16 -2.86682 | opp_overlap 2304573, overlap 2304572 2304570 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTCTGCTT TERM 2463 2304591 - 2304573 - f 100 -16 -4.8048 | opp_overlap 2304572 2304570 2304573 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTCTGCTT YPO2035 2305121 - 2305951 + | hypothetical protein YPO2036 2305965 - 2307077 + | putative transcriptional regulatory protein TERM 2464 2307195 - 2307182 - f 76 -2.5 -5.252 | opp_overlap 2307175 TACTGGTATAAAAAA TTTAT TGAT ATAAA ACAGTGATTGATACA TERM 2465 2307323 - 2307305 - f 100 -8.1 -5.80951 | opp_overlap 2307305 2307304 ATGCAAAAGAAAAAA CCCAACC ATAAA GGTCGGG GTTTATTATTTGGCG TERM 2466 2307543 - 2307559 + F 73 -7.3 -4.16016 | overlap 2307535 AAAGTTATAGCAATT TGCTGAT TTC ATCGGCA TTTATTGAGGGATAC YPO2037 2307712 - 2308449 + | putative hydrolase YPO2038 2308486 - 2309046 + | hypothetical protein TERM 2467 2309491 - 2309532 + T 78 -8.7 -3.80625 | GTAGCGTGAAATGAC CTGTGCCGGTTAGTCAGTC AATG GGATGACTAATTGGCCCGG TTTAACTTCTAACCC YPO2039 2310063 - 2309500 - | hypothetical protein TERM 2468 2309934 - 2309946 + g 70 -4.9 -4.62302 | TACCGATCTGTTTTT CATAA TTA TTATG TTTTTGCAGGTATTC TERM 2469 2310452 - 2310405 - R 79 -10.8 -3.14931 | gap 1, opp_overlap 2310417 CGTATGCGCGAGGAA TGT-GCTTATCAACCGGAAAGGC AAA ACGTCTCCGGTTGATAAGGGACA TAACGTTAGCTGCTG YPO2040 2311663 - 2310458 - | multidrug resistance protein MdtH TERM 2470 2311419 - 2311435 + g 70 -8.7 -3.53012 | opp_overlap 2311432 GCTCGCATTAGCATC CCGGTGA CAA TCATCGG TTTGGCACCGAACCG rimJ 2311957 - 2312541 + | ribosomal-protein-S5-alanine N-acetyltransferase TERM 2471 2313196 - 2313159 - g 79 -5.5 -5.0133 | opp_overlap 2313181, overlap 2313161 TAGCCCTTGAAAAAA CAGCCCTTGAAGCTAGG GTTG CCCAGCTTGAACAGCAG GTTATCCAGTTGTCA TERM 2472 2313194 - 2313161 - g 71 -6.7 -4.13561 | opp_overlap 2313181, overlap 2313159 GCCCTTGAAAAAACA GCCCTTGAAGCTAGG GTTG CCCAGCTTGAACAGC AGGTTATCCAGTTGT TERM 2473 2313432 - 2313446 + G 82 -7.1 -4.88736 | TGGATACGCTCGCTG CGGCA AGTGA TGCCG TTTTTGTCCATAGTA YPO2042 2312549 - 2314159 + | putative oxidoreductase TERM 2474 2314362 - 2314388 + F 71 -8.7 -3.34894 | opp_overlap 2314366, overlap 2314360 2314363 2314366 CCCCCATTGGGTAGA GCAACGCCTGC AGACC GTAGGCGTTGG TATTTACAGCACATT TERM 2475 2314363 - 2314387 + F 83 -12.2 -2.60615 | opp_overlap 2314366, overlap 2314362 2314360 2314366 CCCCATTGGGTAGAG CAACGCCTGC AGACC GTAGGCGTTG GTATTTACAGCACAT TERM 2476 2314533 - 2314545 + G 90 -6.2 -5.28826 | ATTTGGTGCAGGTAT GGCG ACGGA CGCC TTTTTTGTGGCATTT mviN 2314426 - 2315961 + | hypothetical protein TERM 2477 2316084 - 2316068 - f 71 -9.4 -2.96538 | opp_overlap 2316068 ATAATGTATTATATA GCCCGA TAATT TCGGGC TTTTTTACATATTGA TERM 2478 2316068 - 2316084 + F 100 -9.4 -5.1615 | opp_overlap 2316068 ATAATGTATTATATA GCCCGA TAATT TCGGGC TTTTTTACATATTGA TERM 2479 2316660 - 2316649 - g 100 -4.4 -5.74122 | CATCACAGAAAAAAA TCTC CCCA GAGA AAATATGCCTGCCAA YPO2044 2316429 - 2318102 + | putative hemolysin activator protein TERM 2480 2320982 - 2320968 - g 71 -5.7 -4.42238 | overlap 2320979 GCAGTCGAACCAAAA CGTCA GACAA TGACG CGTTAGCGTTGGTTA YPO2045 2318132 - 2322862 + | putative hemolysin TERM 2481 2322897 - 2322909 + T 72 -6.2 -4.2461 | overlap 2322897 TAAAGATGTCTCTGA GGGG AAAAC CCCC TTTATTCATCACCCT TERM 2482 2323067 - 2323080 + T 100 -9.5 -5.07107 | CTAATCGTTTTTTAA GGCCC CGAG GGGCC TTTTTTGACGATTTA TERM 2483 2323108 - 2323134 + T 74 -8 -3.95674 | TTACATCCGCTCAAC GGTTTGAATACC CAA GGTGTCCAGACC TTGTTTCAGCGTTTT argS 2324823 - 2323093 - | arginyl-tRNA synthetase YPO2047 2325446 - 2326021 + | hypothetical protein TERM 2484 2326426 - 2326443 + G 76 -2.7 -5.06414 | gap 1, overlap 2326430 GGTTCATCCGATAGT TCGGCCAC GTG GTGG-TGA TTTTTGTTACAGCAG cutC 2326253 - 2327017 + | copper homeostasis protein CutC TERM 2485 2327180 - 2327204 + T 100 -10 -4.80959 | ATATAACGAACGGTA TCCCCCATCT GGGTG AGTTGGGGGA TTTTCTTATGGCTTA YPO2049 2328181 - 2327210 - | hypothetical protein YPO2050 2328981 - 2328178 - | hypothetical protein TERM 2486 2328258 - 2328274 + g 70 -2.1 -4.94992 | opp_overlap 2328257, overlap 2328259 CCGCGTGTTCAAACC CCGCCTG ATG CAGACGA TTTTTGTGGGTTTCC TERM 2487 2329112 - 2329096 - R 100 -10.8 -4.46072 | GGGAATAAACATAAA GGCGGC GATAT GCCGCC CAGACTAACGGTTGC YPO2051 2329567 - 2329172 - | hypothetical protein YPO2052 2330562 - 2329747 - | hypothetical protein TERM 2488 2331706 - 2331719 + G 74 -2.3 -5.16841 | TAACCGTCGTCGTGA TCTGG GTGG CCTGA TTTTTATTGATATGC aspS 2331620 - 2333416 + | aspartyl-tRNA synthetase TERM 2489 2333783 - 2333797 + G 73 -11.4 -3.0263 | ACCAGTGGTTGGATG CGGCAG AGG CTGCCG TATTGACCAAGTCCT ntpA 2333416 - 2333859 + | dATP pyrophosphohydrolase TERM 2490 2333964 - 2333950 - g 73 -5.6 -4.66537 | overlap 2333952 2333960 TGGGCCAACACAAAA CACCGC AAA GCGGCA CAGGATGCCAAACGC TERM 2491 2333962 - 2333952 - g 72 -8.2 -3.94773 | overlap 2333950 2333960 GGCCAACACAAAACA CCGC AAA GCGG CACAGGATGCCAAAC YPO2055 2333917 - 2334660 + | hypothetical protein ruvC 2334869 - 2335390 + | Holliday junction resolvase TERM 2492 2335429 - 2335448 + F 100 -12.2 -5.34555 | opp_overlap 2335429, overlap 2335444 TTAACTGTTATCACA GGCTGGAT ATCC ATCCAGCC TTTTTTATGCTATAA TERM 2493 2335448 - 2335429 - f 83 -12.2 -2.79831 | opp_overlap 2335429 2335444 TTAACTGTTATCACA GGCTGGAT ATCC ATCCAGCC TTTTTTATGCTATAA TERM 2494 2335726 - 2335709 - g 73 -6.3 -4.58663 | gap 1 ATCATTCTGGAAAAA CAGCCACC GCT GGTG-CTG CTGGAAACAAACGGT TERM 2495 2336043 - 2336029 - g 71 -5.6 -4.56597 | opp_overlap 2336031, overlap 2336031 GGGTGTCGGTAAAAA GACCGC CGA GCGGTT AGTGGTCGAAATGAA TERM 2496 2336041 - 2336031 - g 72 -8.2 -3.90048 | opp_overlap 2336031, overlap 2336029 GTGTCGGTAAAAAGA CCGC CGA GCGG TTAGTGGTCGAAATG ruvA 2335673 - 2336287 + | Holliday junction DNA helicase motor protein ruvB 2336449 - 2337453 + | Holliday junction DNA helicase B TERM 2497 2337450 - 2337508 + T 72 -9.8 -2.85803 | gap 1, opp_overlap 2337454 2337456, overlap 2337434 TATTACTCGGGAAGA ATAATACGTTTCACGCTGTGGGGGTTA TAGGCC TAAACCCCACAGCGTGAAGTG-ATGAC TATCCTCGTGCTTTT TERM 2498 2337504 - 2337454 - T 89 -10.6 -3.94877 | gap 1, opp_overlap 2337434 2337450, overlap 2337456 ACTCGGGAAGAATAA TACGTTTCACGCTGTGGGGGTTA TAGGCC TAAACCCCACAGCGTGAAGTG-A TGACTATCCTCGTGC TERM 2499 2337503 - 2337456 - T 100 -15.7 -3.56318 | opp_overlap 2337450, overlap 2337454 TCGGGAAGAATAATA CGTTTCACGCTGTGGGGGTTA TAGGCC TAAACCCCACAGCGTGAAGTG ATGACTATCCTCGTG znuB 2338293 - 2337508 - | high-affinity zinc transporter membrane component TERM 2500 2338236 - 2338223 - G 76 -5.9 -4.61566 | CGCCAAACGACAAAA GACCC CAGC GGGCC AGCGGCTGTTGCCAG znuC 2339048 - 2338290 - | high-affinity zinc transporter ATPase TERM 2501 2338738 - 2338754 + g 76 -4.3 -5.00616 | opp_overlap 2338717 TGCACCCGTGTGAGT GCAGGCA GAA TGTCGGC TTTTTTCACCCCCGG TERM 2502 2338868 - 2338840 - G 70 -8.1 -3.65812 | TTTTGCGGAACATAA CCGATGCGTAAGC CAG GCTCACGAACCAG AGATCCACTACTTGG znuA 2339124 - 2340080 + | high-affinity zinc transporter periplasmic component TERM 2503 2340193 - 2340213 + G 86 -8.2 -4.60797 | GACTGTAATGACACT GGCCGTCG CTGTT TGGCGGCC TTTTATCTATCACCC YPO2062 2340101 - 2341417 + | hypothetical protein TERM 2504 2341424 - 2341447 + F 73 -8.8 -3.5511 | overlap 2341422 2341426 CTGGATTAGCAGTGA TACCGTCAGG TTAG CCTGTCGGTG TGTTTATCCCTAAGC TERM 2505 2341426 - 2341445 + F 74 -9.2 -3.34988 | overlap 2341424 2341422 GGATTAGCAGTGATA CCGTCAGG TTAG CCTGTCGG TGTGTTTATCCCTAA TERM 2506 2341457 - 2341491 + F 100 -15.2 -3.74077 | overlap 2341462 TCGGTGTGTTTATCC CTAAGCTGCCAGTG AGTTGAG CACTGGCAGTTTAG TTTCAGTCTGTCAGC TERM 2507 2341462 - 2341486 + F 100 -11.5 -4.09556 | overlap 2341457 GTGTTTATCCCTAAG CTGCCAGTG AGTTGAG CACTGGCAG TTTAGTTTCAGTCTG msbB 2341684 - 2342646 + | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase TERM 2508 2342767 - 2342746 - T 100 -15.9 -4.36595 | opp_overlap 2342742 2342741 CAGTTAAAGGTAAAA GGCCCGCTA GTGA TAGCGGGCC TGAGGTTATTGACAA TERM 2509 2342935 - 2342966 + T 100 -10.8 -4.46757 | overlap 2342940 GGGGTTTGTCAGCAG TCTGAGGCCCGCTA GTGA TAGCGGGCCTTTGC TTTTCTGCCTATCTT TERM 2510 2342940 - 2342961 + T 100 -15.9 -4.27483 | overlap 2342935 TTGTCAGCAGTCTGA GGCCCGCTA GTGA TAGCGGGCC TTTGCTTTTCTGCCT pykA 2344433 - 2342991 - | pyruvate kinase hexR 2345632 - 2344763 - | DNA-binding transcriptional regulator HexR zwf 2345994 - 2347469 + | glucose-6-phosphate 1-dehydrogenase TERM 2511 2347523 - 2347488 - f 78 -9.7 -3.42574 | overlap 2347490 2347491 CTAACCGCACGATAA TAGCGCGCCACCAGA GGCGAA TCTGATGGCGCGTGA CTGCCAGGGAGAGCA TERM 2512 2347521 - 2347490 - f 95 -12.3 -3.28219 | overlap 2347488 2347491 AACCGCACGATAATA GCGCGCCACCAGA GGCGAA TCTGATGGCGCGT GACTGCCAGGGAGAG TERM 2513 2347520 - 2347491 - f 100 -15.8 -2.56449 | overlap 2347490 2347488 ACCGCACGATAATAG CGCGCCACCAGA GGCGAA TCTGATGGCGCG TGACTGCCAGGGAGA eda 2347711 - 2348352 + | keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase TERM 2514 2348405 - 2348431 + F 100 -11.6 -5.03314 | opp_overlap 2348403 2348405 2348409 2348410, overlap 2348410 TATTTTCACCAAAGA CAGAGCCTCTGC ATT GCAGGGGTTTTG TTTTTTCAGAATCAC TERM 2515 2348410 - 2348426 + F 100 -10.1 -5.42198 | opp_overlap 2348405 2348410 2348409 2348403, overlap 2348405 TCACCAAAGACAGAG CCTCTGC ATT GCAGGGG TTTTGTTTTTTCAGA YPO2068 2349046 - 2349510 + | putative integral membrane protein YPO2069 2349530 - 2349826 + | multidrug efflux system protein MdtI TERM 2516 2349873 - 2349846 - T 70 -9.8 -2.52015 | opp_overlap 2349847, overlap 2349845 GCCAGAGGCAGTAAG CGGAGGGTAGCC TGGC GGCTACTCTCCT TTGTTTTTGTGGCTT TERM 2517 2349847 - 2349872 + T 100 -15.5 -4.97405 | opp_overlap 2349846 2349845 CCAGAGGCAGTAAGC GGAGGGTAGCC TGGC GGCTACTCTCC TTTGTTTTTGTGGCT YPO2070 2350302 - 2349958 - | hypothetical protein TERM 2518 2350995 - 2350982 - g 74 -9.5 -3.53012 | TGTTTTGTGGTGAAA GCCCG TCGT CGGGC GATGGATGCTGATGT TERM 2519 2351011 - 2351030 + G 100 -10 -4.82901 | opp_overlap 2351023 GATGGATGCTGATGT GGTGGTGG TAAA CCACCATC TTTTTCTGGCGGACA TERM 2520 2351608 - 2351597 - g 78 -5.8 -4.7497 | opp_overlap 2351597 2351596 TTGATTGAGGAAAAA CCAG GCAC CTGG ATTTTCACCTCAGCG YPO2071 2350433 - 2352337 + | putative DEAD box family helicase YPO2072 2352409 - 2353107 + | hypothetical protein YPO2073 2353262 - 2353849 + | putative lipoprotein TERM 2521 2353887 - 2353870 - f 100 -9.1 -4.82901 | gap 1 TTTGGGCCACAAAAA GGCGC-GG AGT CCAGCGCC TGAGGTTATTGACAA TERM 2522 2353965 - 2353991 + F 72 -10.1 -2.87229 | gap 1, opp_overlap 2353954, overlap 2353960 2353966 ACATCCATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCTACCGT TERM 2523 2353966 - 2353992 + F 84 -10.1 -3.79519 | gap 1, opp_overlap 2353954, overlap 2353960 2353965 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCTACCGTT TERM 2524 2354043 - 2354060 + F 100 -12.7 -4.64844 | TTGTCAGCAGTCAGA GGCGCTG AGTC CAGCGCC TTTTCTATATCTACA TERM 2525 2354599 - 2354614 + G 71 -6.1 -4.29106 | opp_overlap 2354609 CGCGGCGTTGCGTTA TGCGG ACCAAC CCGCA TTTATTAATATGGGC fadD 2354492 - 2356180 + | long-chain-fatty-acid--CoA ligase TERM 2526 2356235 - 2356199 - f 100 -14.6 -3.767 | gap 1, opp_overlap 2356200 2356203, overlap 2356200 2356202 2356206 2356209 GACGGAGTCACTAAA TCATCAACAACGCCGGT TATC ACCGGCGTTGTTG-TGT TTGTTATCGAACTAT TERM 2527 2356234 - 2356200 - f 100 -18.1 -2.85699 | gap 1, opp_overlap 2356200 2356203, overlap 2356199 2356202 2356206 2356209 ACGGAGTCACTAAAT CATCAACAACGCCGGT TATC ACCGGCGTTGTTG-TG TTTGTTATCGAACTA TERM 2528 2356200 - 2356234 + F 100 -18.1 -4.31433 | gap 1, opp_overlap 2356199 2356200 2356202 2356206 2356209, overlap 2356203 ACGGAGTCACTAAAT CATCAACAACGCCGGT TATC ACCGGCGTTGTTG-TG TTTGTTATCGAACTA TERM 2529 2356233 - 2356202 - f 100 -17.4 -2.97667 | opp_overlap 2356200 2356203, overlap 2356200 2356199 2356206 2356209 GGAGTCACTAAATCA TCAACAACGCCGGT TATC ACCGGCGTTGTTGT GTTTGTTATCGAACT TERM 2530 2356203 - 2356232 + F 100 -20.9 -3.75817 | opp_overlap 2356202 2356200 2356199 2356206 2356209, overlap 2356200 GAGTCACTAAATCAT CAACAACGCCGGT TATC ACCGGCGTTGTTG TGTTTGTTATCGAAC TERM 2531 2356229 - 2356206 - f 100 -16.8 -3.34227 | opp_overlap 2356203 2356200, overlap 2356202 2356200 2356199 2356209 TCACTAAATCATCAA CAACGCCGGT TATC ACCGGCGTTG TTGTGTTTGTTATCG TERM 2532 2356226 - 2356209 - f 100 -12.7 -3.79909 | opp_overlap 2356203 2356200, overlap 2356206 2356202 2356200 2356199 CTAAATCATCAACAA CGCCGGT TATC ACCGGCG TTGTTGTGTTTGTTA TERM 2533 2357275 - 2357255 - g 78 -2.6 -5.24129 | opp_overlap 2357255, overlap 2357257 CCGGGGTACAAAAAA GTCTTTAA AGATA TTAAAGCC TTGATTCAATCGGTC rnd 2356340 - 2357461 + | ribonuclease D TERM 2534 2357484 - 2357513 + T 70 -10.1 -2.54204 | opp_overlap 2357479 2357481 2357502, overlap 2357483 2357482 2357509 2357510 TGATATTAATCAGCC TTCAGGGTGGGAT ATTA ATTCCACGCTGAA ACTTTTCAGTTTTAA TERM 2535 2357509 - 2357522 + T 73 -5.3 -4.61873 | opp_overlap 2357502 2357481, overlap 2357484 2357483 2357482 2357510 GATATTAATTCCACG CTGAA ACTT TTCAG TTTTAATTTATGAAC TERM 2536 2357686 - 2357655 - T 100 -17.5 -3.43117 | opp_overlap 2357658, overlap 2357658 ACAGTCAATTGAGAA TAACGCCCCTGTA AATAAA TACAGGGGCGTTA TTGAGAAGAAATCAT TERM 2537 2357683 - 2357658 - T 100 -14.8 -3.84808 | opp_overlap 2357658, overlap 2357655 GTCAATTGAGAATAA CGCCCCTGTA AATAAA TACAGGGGCG TTATTGAGAAGAAAT TERM 2538 2357658 - 2357683 + T 100 -14.8 -3.61517 | opp_overlap 2357655 2357658 GTCAATTGAGAATAA CGCCCCTGTA AATAAA TACAGGGGCG TTATTGAGAAGAAAT minE 2357967 - 2357698 - | cell division topological specificity factor MinE minD 2358783 - 2357971 - | cell division inhibitor MinD minC 2359494 - 2358808 - | septum formation inhibitor TERM 2539 2359164 - 2359179 + g 70 -4.6 -4.70879 | overlap 2359166 2359175 CCGGCGGACTGATGA CCGGCT CTGG AGCCAG TTTTTGGCCTTTACC TERM 2540 2359700 - 2359716 + r 74 -6.5 -4.55491 | TTGACCCCCTATATT TAGCGAC TCA GCCGCTA TTTTATGATTGCATA TERM 2541 2359720 - 2359731 + r 71 -3 -5.03145 | ACTCAGCCGCTATTT TATG ATTG CATA TTTTTTCAACACTTG YPO2079 2360183 - 2359920 - | hypothetical protein YPO2080 2360215 - 2360487 + | hypothetical protein YPO2081 2360628 - 2361713 + | putative lipoprotein YPO2082 2361784 - 2362440 + | hypothetical protein TERM 2542 2362479 - 2362448 - f 82 -7.9 -4.45693 | overlap 2362449 2362450 TAATATAAAGAGAAA CGTGCCGTCCGAC TCTACT GTCGGGCGGCAAA ACTTGCATCTGTAAG TERM 2543 2362478 - 2362449 - f 74 -9.2 -3.25789 | overlap 2362448 2362450 AATATAAAGAGAAAC GTGCCGTCCGAC TCTACT GTCGGGCGGCAA AACTTGCATCTGTAA TERM 2544 2362477 - 2362450 - f 86 -12.7 -2.53847 | overlap 2362449 2362448 ATATAAAGAGAAACG TGCCGTCCGAC TCTACT GTCGGGCGGCA AAACTTGCATCTGTA YPO2083 2362543 - 2362989 + | hypothetical protein TERM 2545 2363387 - 2363400 + F 80 -4.5 -5.20328 | opp_overlap 2363359 2363357 TGCCAAATTCGCGAA GGTGG ACAT CTACC TTTATTTTTTTCCCC TERM 2546 2364302 - 2364320 + F 100 -13.2 -4.01078 | CCAGGGGGTAATCTG CTCTCCTG ATT CAGGAGAG TTTATGGTCACTTTT y1093 2364324 - 2365346 + | transposase for insertion sequence IS100 TERM 2547 2365427 - 2365413 - g 77 -11.4 -3.3506 | overlap 2365404 TGGAAAGCCTTATAA GCGCAG CGC CTGCGC TGTCACAACAGGCAG YPO2086 2365343 - 2366125 + | transposase/IS protein YPO2087 2366553 - 2366293 - | putative phage excisionase YPO2087a 2366834 - 2366631 - | hypothetical protein YPO2088 2367497 - 2366853 - | putative methyltransferase TERM 2548 2366933 - 2366945 + g 70 -3.3 -4.86773 | AGCCTTTCCGTCCGG CAGCC GAT GACTG TTTTTCCTGCTTTTG ninB 2367596 - 2368024 + | hypothetical protein YPO2090 2368098 - 2368703 + | hypothetical protein YPO2091 2368704 - 2369093 + | putative phage antitermination protein TERM 2549 2369182 - 2369193 + G 100 -7.2 -5.64274 | opp_overlap 2369175, overlap 2369175 CACAACAACGCATAG CCGC GTTT GCGG TTTTTTTATGCGTAA YPO2092 2369097 - 2369315 + | hypothetical protein YPO2093 2369364 - 2369927 + | hypothetical protein TERM 2550 2370021 - 2370039 + T 82 -5.9 -5.04601 | opp_overlap 2370021 ACACCATTAAAAAAG GCCTCGT ATATC GCGGGGC TTTTTCGTTTCTACA YPO2094 2370194 - 2370012 - | hypothetical protein TERM 2551 2370246 - 2370271 + H 76 -9.7 -3.39856 | opp_overlap 2370222, overlap 2370247 GCAAGTCCTCGGCAT GGTCGCCCTCA TTGG TGAGGGTGACA TTCATTAACTATATG TERM 2552 2370247 - 2370270 + H 91 -13.2 -2.63432 | overlap 2370246 CAAGTCCTCGGCATG GTCGCCCTCA TTGG TGAGGGTGAC ATTCATTAACTATAT TERM 2553 2370311 - 2370328 + H 100 -9.1 -4.8622 | ACCAACTAATTTCAA GGCTCAC TTCG GTGGGCC TTTTTACTTCAGAGA YPO2095 2370351 - 2370560 + | hypothetical protein YPO2096 2370832 - 2370557 - | hypothetical protein TERM 2554 2370941 - 2370960 + H 100 -11.4 -4.43272 | CCGGTACTTTTTCAG GGCTACGC TTAT GCGTGGCC TTTTCCGTTTTAGCT YPO2097 2370955 - 2371275 + | hypothetical protein YPO2098 2371306 - 2371818 + | putative phage lysozyme rzpR 2371803 - 2372261 + | putative prophage endopeptidase TERM 2555 2372636 - 2372657 + F 100 -8.7 -5.45652 | opp_overlap 2372636 AACAAAGAACATGAA GGCTCAGTT TAAC GACTGGGCC TTTTTTATTGGCAGT YPO2100 2372723 - 2373520 + | phage regulatory protein TERM 2556 2373596 - 2373568 - f 93 -9 -4.48483 | GATAATAAAGACAAA TTGAGAGCTACT TTCAC AACAGCTCTCAA TCAACTAAAAGCATT TERM 2557 2373926 - 2373950 + F 95 -11.5 -3.85698 | opp_overlap 2373926 2373940 TTTTCACATATCGAA GTCTCAGCC AATTAGC GGCTGAGAC TTTATCAACCAGCGG TERM 2558 2373950 - 2373926 - f 86 -12.2 -3.15999 | opp_overlap 2373926, overlap 2373940 TTTTCACATATCGAA GTCTCAGCCA ATTAG CGGCTGAGAC TTTATCAACCAGCGG YPO2101 2373977 - 2374612 + | hypothetical protein YPO2102 2374643 - 2375092 + | hypothetical protein TERM 2559 2375202 - 2375182 - f 73 -2.5 -5.23644 | overlap 2375184 AATCAAAGACAAAAA TGGGAAGTG TGT CACTTTCAA AATGACTCCAGAGCA TERM 2560 2376910 - 2376931 + G 77 -10.1 -3.74693 | TTTATTATCGAGTTC GGTGACCGC CTGA GCGATCACC TTTAATACGGTGGCA y1062 2375728 - 2376936 + | transposase for the IS285 insertion element TERM 2561 2378228 - 2378210 - f 76 -8 -4.1964 | overlap 2378214 TGGAATACCTGAAAA CCAACGCC AAT GGCGCAGG TATCAGCATTTATCA TERM 2562 2378224 - 2378214 - f 73 -8.2 -3.68767 | overlap 2378210 ATACCTGAAAACCAA CGCC AAT GGCG CAGGTATCAGCATTT YPO2108 2379304 - 2380416 + | hypothetical protein TERM 2563 2380450 - 2380435 - f 70 -7.6 -3.62775 | ATTACGCTTTAACAA TTACCG CCAA CGGTAA CAAACTGAGTTATCC TERM 2564 2380476 - 2380493 + F 87 -6.2 -5.14563 | TATCCAAAATCTGAG CCTCGC CATCGT GCGGGG TTTTTTAATGGGCCA TERM 2565 2380533 - 2380523 - f 74 -6.8 -4.2461 | AGGCCCAGCAATAAA TCCC AAG GGGA CAGCATGCTATTCCG TERM 2566 2380997 - 2380983 - g 76 -8.5 -4.18018 | CCGCCGCATTGAAAA CCGGC GCATT GCCGG GCGCTGCTGACGACA YPO2109 2380538 - 2381311 + | hypothetical protein YPO2110 2381325 - 2382530 + | hypothetical protein TERM 2567 2382545 - 2382558 + G 100 -9.5 -4.66537 | overlap 2382556 ATGGTGATGACTATG GGGGC TGTG GCCCC TTTTCTATTGGAGGA TERM 2568 2382774 - 2382753 - g 70 -8 -3.71672 | overlap 2382738 2382749 GCCGAGCAAAACTAA CTCAGCCA TTACCC TGGCCGAG ATCAGATATCATTTT YPO2111 2382530 - 2383060 + | hypothetical protein YPO2112 2383057 - 2383311 + | hypothetical protein YPO2113 2383313 - 2383663 + | hypothetical protein YPO2114 2383665 - 2384249 + | hypothetical protein YPO2115 2384246 - 2384653 + | hypothetical protein TERM 2569 2384675 - 2384688 + F 100 -9.5 -5.71712 | opp_overlap 2384675 2384672 ATCAATCCAACACCA CCGGC CTAT GCCGG TTTTTTTATATCCAA TERM 2570 2384688 - 2384675 - f 70 -9.5 -2.78058 | opp_overlap 2384675, overlap 2384672 ATCAATCCAACACCA CCGGC CTAT GCCGG TTTTTTTATATCCAA YPO2116 2384719 - 2385639 + | hypothetical protein YPO2117 2385652 - 2385963 + | hypothetical protein YPO2118 2386050 - 2386271 + | hypothetical protein TERM 2571 2387486 - 2387471 - g 76 -7.6 -4.38712 | CTCACTTTCAGAAAA TGCCAA CAAT TTGGCA GAGAATGCAGATAAT TERM 2572 2388439 - 2388429 - g 80 -2.4 -5.46657 | GAGTCTAACAAAAAA GCGG CAG CAGC AGGGAAAGCTACATT TERM 2573 2388553 - 2388534 - g 78 -2.2 -5.27023 | gap 1 ACGCCAAAAATAAAA GCT-TATCA AGA CGATATAGC AACAAGGGAGTTACT YPO2119 2386272 - 2389775 + | putative phage tail protein YPO2120 2389778 - 2390119 + | hypothetical protein TERM 2574 2390257 - 2390274 + F 100 -10.5 -5.24129 | opp_overlap 2390244 2390242 2390257, overlap 2390245 CACGCCCTTTCTAAA GGCTGCC TTAT GGCGGCC TTTTTTGTGCCCAGA TERM 2575 2390274 - 2390257 - f 71 -8.3 -3.53224 | opp_overlap 2390245 2390257, overlap 2390244 2390242 CACGCCCTTTCTAAA GGCTGCC TTAT GGCGGCC TTTTTTGTGCCCAGA TERM 2576 2390311 - 2390293 - f 100 -16 -4.36914 | opp_overlap 2390293 TTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC TERM 2577 2390293 - 2390311 + F 100 -16 -3.07307 | opp_overlap 2390293 TTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC tnp 2390424 - 2390882 + | transposase for the IS1541 insertion element TERM 2578 2390956 - 2390988 + F 100 -11.3 -3.92373 | opp_overlap 2390963, overlap 2390960 2390962 2390963 CCTTATAGGCGCATA TGAAAAACCTCCGGC TAT GCCGGAGGATATTTA TTTATGGGTGAAATA TERM 2579 2390960 - 2390984 + F 100 -9.9 -4.57482 | opp_overlap 2390963, overlap 2390956 2390962 2390963 ATAGGCGCATATGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTTATGGGTGA TERM 2580 2390962 - 2390982 + F 100 -12.5 -3.89305 | opp_overlap 2390963, overlap 2390960 2390956 2390963 AGGCGCATATGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTTATGGGT TERM 2581 2390981 - 2390963 - f 100 -16 -4.8048 | opp_overlap 2390962 2390960 2390956 2390963 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTATGGG TERM 2582 2390963 - 2390981 + F 100 -16 -2.92499 | opp_overlap 2390963, overlap 2390962 2390960 2390956 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTATGGG YPO2122 2391003 - 2391755 + | hypothetical protein TERM 2583 2391781 - 2391771 - g 79 -6.8 -4.63586 | opp_overlap 2391770 AGATGAGAGATAAAA CGCT TAA AGCG ATATTGGCCCATGCC YPO2123 2391758 - 2392468 + | putative phage minor tail protein TERM 2584 2392672 - 2392689 + F 71 -3.4 -4.9218 | opp_overlap 2392647 GGTTATGCCGTTACA CCGAAG ACGAAA TTTCGG TTTTTGTCATAAGTA YPO2124 2392729 - 2393361 + | hypothetical protein TERM 2585 2393402 - 2393379 - T 78 -5.2 -5.06414 | opp_overlap 2393384, overlap 2393384 TGCTCCGAATAAAAA CTAAACCCGC TCCG GCGGGTTTTT GCATTCTAGCCCACT TERM 2586 2393397 - 2393384 - T 95 -9.5 -4.43037 | opp_overlap 2393384, overlap 2393379 CGAATAAAAACTAAA CCCGC TCCG GCGGG TTTTTGCATTCTAGC TERM 2587 2393384 - 2393397 + T 100 -9.5 -4.78149 | opp_overlap 2393379 2393384 CGAATAAAAACTAAA CCCGC TCCG GCGGG TTTTTGCATTCTAGC TERM 2588 2393412 - 2393425 + T 100 -8.1 -5.46657 | GTTTTTGCATTCTAG CCCAC TCTG GTGGG TTTTTTATTGGCATC YPO2125 2393979 - 2393440 - | putative phage regulatory protein YPO2126 2394149 - 2395243 + | hypothetical protein TERM 2589 2395273 - 2395288 + F 80 -6.1 -4.85195 | opp_overlap 2395273 TCACACAAAACCCAA CCCAC TTAACT GTGGG TTTTTGCGTTATTTT YPO2127 2395342 - 2395893 + | putative phage-related membrane protein YPO2128 2395901 - 2396251 + | putative phage-related lipoprotein TERM 2590 2396273 - 2396288 + F 100 -8.2 -5.45652 | opp_overlap 2396273 TGTAAAACAAATCGA GGTCGC TTAG GCGGCC TTTTTTATTGGAGAT YPO2129 2396307 - 2396927 + | putative phage tail assembly protein TERM 2591 2397060 - 2397023 - T 95 -12.9 -3.15999 | gap 1, opp_overlap 2397028 2397030, overlap 2397025 GTGTCAGACATGCAA CAGCAGATCACTAGCATC CAA GAGGC-AGTGATCTGCTA TCAAGATTTAAACCA TERM 2592 2397058 - 2397025 - T 100 -13.3 -3.14125 | gap 1, opp_overlap 2397028 2397030, overlap 2397023 GTCAGACATGCAACA GCAGATCACTAGCATC CAA GAGGC-AGTGATCTGC TATCAAGATTTAAAC YPO2130 2397413 - 2397102 - | hypothetical protein TERM 2593 2397397 - 2397372 - G 79 -11.1 -3.58726 | TCCTCCGATAGATAA CACCCTAGCCA TGCG CGGCTTGGGTG GGCTGACCTTACACA TERM 2594 2397464 - 2397480 + H 100 -12.3 -5.64274 | AATAAACACGCCAAT GCCCACA CTT TGTGGGC TTTTTTTATGGGTGA TERM 2595 2398100 - 2398079 - g 70 -4.3 -4.6902 | GTACAAGGCGAAAAA CAGCCAATG CCAA CTCTGGCCG CATTGCCGACAAGAT YPO2131 2397499 - 2400702 + | putative phage host specificity protein YPO2132 2400702 - 2401700 + | hypothetical protein TERM 2596 2401937 - 2401921 - g 73 -5.1 -4.6821 | opp_overlap 2401921 AATGGCAATATAAAA GAATCCG TGG CCGATTC CTCTTATGCAATTAT YPO2133 2401717 - 2402634 + | hypothetical protein YPO2134 2402645 - 2403064 + | putative phage tail fiber assembly protein YPO2135 2403061 - 2403216 + | hypothetical protein TERM 2597 2403311 - 2403290 - T 84 -10.1 -3.74693 | TGCCACCGTATTAAA GGTGATCGC TCAG GCGGTCACC GAACTCGATAATAAA y1062 2404493 - 2403285 - | transposase for the IS285 insertion element TERM 2598 2404747 - 2404768 + r 78 -8.7 -3.827 | TAAATTGCTTTAGCC GATGACAGC CTAA GCTGCCATC TTTACCTTCATTGTT YPO2137 2405970 - 2404798 - | hypothetical protein TERM 2599 2404963 - 2404947 - G 83 -5.1 -5.0925 | overlap 2404949 GCGGAAAACCAAAAA TACCCAC GAA GTAGGCA ACGACAAACCAAGTC YPO2138 2407173 - 2405974 - | putative aminotransferase YPO2139 2407930 - 2407190 - | hypothetical protein TERM 2600 2408778 - 2408803 + H 70 -7.7 -3.65046 | opp_overlap 2408777 TTTTCTTTAATAGAT TCACTATTCCT GCGC AGGAATAATGA TTATTAACATAGCCA TERM 2601 2408950 - 2408931 - H 80 -6.4 -4.88067 | ATGCATGGAGAAAAA GGTGAGGA TATG TCCTTACC CATGGCGGTTTTTAC YPO2140 2409022 - 2409378 + | hypothetical protein TERM 2602 2409430 - 2409465 + T 73 -8.5 -3.66378 | opp_overlap 2409429 2409424 2409430 ATTGACTAATGAAAC TCAGATCAACAGG GGATGGAAAA TCTGTTGATCTGA TTTCAATCCAATCTG TERM 2603 2409769 - 2409751 - T 100 -11.7 -4.98522 | opp_overlap 2409751 AATCTGATATAAAAA TGGCGCC AGAGA GGCGCCA TTGATAATAAAGATA TERM 2604 2409751 - 2409769 + T 84 -11.7 -3.21416 | opp_overlap 2409751 AATCTGATATAAAAA TGGCGCC AGAGA GGCGCCA TTGATAATAAAGATA dsbB 2410325 - 2409795 - | disulfide bond formation protein B nhaB 2412135 - 2410561 - | sodium/proton antiporter TERM 2605 2410773 - 2410783 + g 72 -8.2 -3.83026 | opp_overlap 2410772 2410773 GCAGGAACAAGAAAG CGGC CTG GCCG TTTGGTGTCGCCACG TERM 2606 2410971 - 2410960 - G 78 -5.8 -4.74917 | ATTAAACAGATAAAA CAGC GATA GCTG AGCGGAAGGCGAGGC TERM 2607 2411669 - 2411654 - G 73 -3.2 -5.00846 | overlap 2411655 TAAATAGTATAAAAA CCAACG GATA CGCTGA TAACTACCGCGATTA TERM 2608 2411802 - 2411791 - G 71 -5.8 -4.32857 | opp_overlap 2411791 TTTCGTAAATACAAA CAGC AGCA GCTG TTTCATAAAGTAGAT TERM 2609 2412766 - 2412748 - g 70 -3 -4.88736 | overlap 2412758 CATCATCCAGAAAAA GCGCAAGA AAT TTTGGCGC GAGCGAAAACAGTGG fadR 2412379 - 2413098 + | fatty acid metabolism regulator TERM 2610 2413269 - 2413285 + T 100 -10.1 -5.04385 | TTGTCAGCAGTCTGA GGGGCGT TTA ATGCCCC TTTTTTACCGATGTC YPO2145 2414851 - 2413316 - | hypothetical protein TERM 2611 2416100 - 2416120 + G 77 -8.9 -3.97368 | overlap 2416096 CTACCGCGCTACTGG CCGGGCTGG TGT CTATCCCGG TTTATCCATTGAAGG TERM 2612 2416589 - 2416635 + G 80 -9.6 -3.98291 | opp_overlap 2416586, overlap 2416590 AGCCACTGAATATTG CCCCGTTACACGATATTCAC CCCATCC GTTAATATCGTGTAACGCGA TTATTTGCCGTTGTT TERM 2613 2416590 - 2416634 + G 78 -13.1 -2.9789 | opp_overlap 2416586, overlap 2416589 GCCACTGAATATTGC CCCGTTACACGATATTCAC CCCATCC GTTAATATCGTGTAACGCG ATTATTTGCCGTTGT dadA 2415316 - 2416620 + | D-amino acid dehydrogenase small subunit YPO2148 2417838 - 2416636 - | putative multidrug resistance protein TERM 2614 2418077 - 2418041 - R 100 -15.4 -5.5112 | CTCATCAATAAAAAA TGCTATTACCTGCCCA GAGGG TAGACAGGTAATAGCA GACAGGTAATGGCGG YPO2149 2418972 - 2418103 - | hypothetical protein TERM 2615 2418942 - 2418963 + g 80 -2.9 -5.3671 | CCCAATGTTGACGAG GTGCACGGT AAAT ACCTTGAAC TTTTTTCATTATCTT YPO2150 2419170 - 2420075 + | LysR-family transcriptional regulatory protein YPO2151 2421231 - 2420110 - | hypothetical protein TERM 2616 2420742 - 2420727 - G 71 -6.8 -4.20084 | AGCAGGCACCTAAAA TGGCCA GCGT CGGCCA TAATCCGGCAAATTG TERM 2617 2421324 - 2421286 - R 78 -5.3 -4.9792 | opp_overlap 2421286 TAGCCCATAGAAAAA GCCGGAAAATGCTTTCT GAACA AGAAAAAATTAACCGGC TGATATTGCTGCTAA YPO2152 2422610 - 2421336 - | hypothetical protein TERM 2618 2422658 - 2422715 + r 74 -9.9 -3.14307 | gap 1 CCACCGGCCTCACAC TGTCCCTTTGTCCTTGGCGTTACAGC ATGGTTA GCGGCAACGCCAAGGACGTAGTG-CA TAGTTTTGCCTTCCT YPO2153 2424694 - 2422760 - | hypothetical protein TERM 2619 2424436 - 2424464 + g 70 -10.4 -3.01712 | opp_overlap 2424434 GATAAGAAACAATCT GTTCTATGGCTT CCTCC ATGCCATAGAAC TCTTCAAACGCAGGA YPO2155 2425117 - 2425887 + | hypothetical protein TERM 2620 2425917 - 2425933 + T 100 -13.7 -5.0916 | opp_overlap 2425917 2425914 2425912 CTATGAGCAAGACCA TGGGGCC AAA GGCCCCA TTTTTATATTGACCG TERM 2621 2425933 - 2425917 - T 93 -13.7 -2.78495 | opp_overlap 2425917, overlap 2425914 2425912 CTATGAGCAAGACCA TGGGGCC AAA GGCCCCA TTTTTATATTGACCG YPO2156 2426835 - 2425960 - | hypothetical protein TERM 2622 2427105 - 2427122 + r 90 -11.3 -3.65529 | opp_overlap 2427105 CTATAAACAAGAAAA GCCACTC GCGT GAGTGGC TTTAGGTAGAAATCT TERM 2623 2427122 - 2427105 - R 100 -11.3 -5.05116 | opp_overlap 2427105 CTATAAACAAGAAAA GCCACTC GCGT GAGTGGC TTTAGGTAGAAATCT gapA 2428153 - 2427149 - | glyceraldehyde 3-phosphate dehydrogenase A TERM 2624 2428412 - 2428430 + H 82 -2.4 -5.70522 | CAGTTTAGGACAATT TTAACTGC TTT GTTGTTAA TTTTTTGTTATTATT YPO2158 2428492 - 2428905 + | methionine sulfoxide reductase B YPO2159 2428976 - 2429248 + | hypothetical protein TERM 2625 2429363 - 2429342 - T 100 -13 -5.47159 | opp_overlap 2429342 TCTGAATACAAAAAA TGGGCGCC GAGGCA GGCGCCCA TTTTTGCGCAGAAAG TERM 2626 2429342 - 2429363 + T 100 -13 -4.56597 | opp_overlap 2429342 TCTGAATACAAAAAA TGGGCGCC GAGGCA GGCGCCCA TTTTTGCGCAGAAAG pncA 2430029 - 2429382 - | nicotinamidase/pyrazinamidase ansA 2431060 - 2430044 - | cytoplasmic asparaginase I TERM 2627 2431148 - 2431127 - R 100 -14.5 -4.7497 | opp_overlap 2431121 2431118 CTCAGCGAGGAAAAA CAGCCCGAT GGGT ATCGGGCTG AATATCTATCTGTAT sppA 2433027 - 2431177 - | protease 4 YPO2163 2433190 - 2433741 + | hypothetical protein TERM 2628 2434156 - 2434168 + G 86 -3.4 -5.61596 | ACGGTGTTGGCATTA TCAG CACGA CTGA TTTTTTTATGCCGAT selD 2433966 - 2435012 + | selenophosphate synthetase topB 2435071 - 2436999 + | DNA topoisomerase III YPO2166 2436996 - 2437286 + | hypothetical protein nudG 2437685 - 2437299 - | pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase xthA 2438589 - 2437783 - | exonuclease III TERM 2629 2438364 - 2438376 + g 77 -9.1 -4.015 | GGAAACCTCGGCGCA CAGCC AGT GGCTG TTCTTTCGTCAATAG TERM 2630 2438442 - 2438430 - G 73 -3.3 -5.0538 | GCCCATGGTAAAAAA CGTGG TAA CCATG CTGGCTGACGTCTTC TERM 2631 2439552 - 2439540 - g 86 -6.3 -5.17054 | ATAATAGGGAAAAAA CTCTT TAA AAGAG AGAAATTTGGCATGA YPO2169 2439399 - 2440259 + | putative LysR-family transcriptional regulatory protein TERM 2632 2442313 - 2442334 + G 77 -10.1 -3.74693 | TTTATTATCGAGTTC GGTGACCGC CTGA GCGATCACC TTTAATACGGTGGCA y1062 2441131 - 2442339 + | transposase for the IS285 insertion element YPO2172 2443719 - 2443255 - | hypothetical protein TERM 2633 2444248 - 2444268 + H 95 -7.6 -4.9138 | opp_overlap 2444250 AATGTTTACGCTGAA TAGCCACC TTTAT GGTGGTTA TTTTGTTTGCGTACT YPO2173 2445053 - 2446069 + | response regulator of RpoS YPO2174 2446376 - 2447722 + | putative nucleotide sugar dehydrogenase TERM 2634 2448101 - 2448124 + T 100 -15.4 -3.69323 | opp_overlap 2448101 TGAAAGACAAAAAAA CACCCTCCTA TTAA TAGGAGGGTG TTTCGATAGTAATAG TERM 2635 2448124 - 2448101 - T 100 -15.4 -5.88197 | opp_overlap 2448101 TGAAAGACAAAAAAA CACCCTCCTA TTAA TAGGAGGGTG TTTCGATAGTAATAG hns 2448555 - 2448157 - | global DNA-binding transcriptional dual regulator H-NS tdk 2449305 - 2449895 + | thymidine kinase YPO2177 2451046 - 2450264 - | transposase/IS protein TERM 2636 2450962 - 2450976 + g 77 -11.4 -3.3506 | overlap 2450975 CTGCCTGTTGTGACA GCGCAG GCG CTGCGC TTATAAGGCTTTCCA y1093 2452065 - 2451043 - | transposase for insertion sequence IS100 TERM 2637 2452087 - 2452069 - R 100 -13.2 -4.01078 | AAAAGTGACCATAAA CTCTCCTG AAT CAGGAGAG CAGATTACCCCCTGG TERM 2638 2452514 - 2452555 + r 86 -6 -5.27477 | gap 2, opp_overlap 2452520, overlap 2452515 2452520 TAATTGGTCTGTAAA AGA-A-AACCCCCGATCAGC GGCT GCTCATCGGGGGTTATATCA TTTTTTGCTTACCCT TERM 2639 2452515 - 2452554 + r 81 -9.5 -3.75402 | gap 2, opp_overlap 2452520, overlap 2452514 2452520 AATTGGTCTGTAAAA GA-A-AACCCCCGATCAGC GGCT GCTCATCGGGGGTTATATC ATTTTTTGCTTACCC TERM 2640 2452520 - 2452547 + r 100 -15.6 -3.74447 | opp_overlap 2452520, overlap 2452515 2452514 GTCTGTAAAAGAAAA CCCCCGATCAGC GGCT GCTCATCGGGGG TTATATCATTTTTTG TERM 2641 2452547 - 2452520 - R 100 -15.6 -5.07652 | opp_overlap 2452515 2452514 2452520 GTCTGTAAAAGAAAA CCCCCGATCAGC GGCT GCTCATCGGGGG TTATATCATTTTTTG adhE 2455280 - 2452605 - | bifunctional acetaldehyde-CoA/alcohol dehydrogenase TERM 2642 2453489 - 2453524 + g 77 -9.1 -4.10007 | opp_overlap 2453500, overlap 2453500 AACCGGTACCTGATG TGGTTGTAATAGCGA CCAATT TCGCTTTTACACCCA TTTTCGGGAACTTAT TERM 2643 2454802 - 2454836 + g 83 -8.7 -4.33621 | gap 2, opp_overlap 2454788 2454787, overlap 2454831 TCCGCTGGCGCACCT GCTGC-GATAGCG-GCT TGA AGCACGATATCCGCAGC TTTATTGGTTGCGTC TERM 2644 2456047 - 2456057 + H 74 -4 -5.08088 | overlap 2456041 GTTATAATGCACTGT TATC GGT GATA TTTTTATTAGCAATT YPO2181 2456087 - 2456731 + | hypothetical protein TERM 2645 2456752 - 2456787 + F 80 -2.6 -5.49809 | gap 1, overlap 2456753 ACCATTCAGAATTTT CGAG-AGGCCACTGA ACTATTC TTGGTGGCCTTCTCC TTTTTTTCCGCTTTG TERM 2646 2457157 - 2457144 - f 73 -2.5 -5.24531 | ATTCTGCATAAAAAA TATTT TAGT AAATA AATTCAATATGTTAT oppA 2457569 - 2459206 + | periplasmic oligopeptide-binding protein precursor oppB 2459293 - 2460213 + | oligopeptide transporter permease oppC 2460232 - 2461137 + | oligopeptide transport system permease protein TERM 2647 2461610 - 2461600 - g 70 -3.2 -4.7497 | TTGATGCAGTAAAAA TGCC CGA AGCA CGTAAACGTATGCGC oppD 2461149 - 2462150 + | oligopeptide transporter ATP-binding component TERM 2648 2463109 - 2463119 + G 70 -8.2 -3.794 | ATTAGAAGGGAGTTT CCGC CAC GCGG TTTCGTGCCTTAAAG oppF 2462147 - 2463148 + | oligopeptide transport ATP-binding protein TERM 2649 2463609 - 2463625 + T 77 -4.5 -5.05228 | opp_overlap 2463572 2463609 2463604 ATTGACGAATTAAAA CATATTA AGT TAATGTG TTTTTGTCATTTAAT TERM 2650 2464016 - 2464049 + T 100 -16.9 -3.80114 | overlap 2464017 GAGCTGCTCTTGCTC ACCTCAGTCACTTAG TTAT CTAAGTGACTGAGGA TTTACTCGATTGCTG TERM 2651 2464017 - 2464048 + T 100 -20.4 -2.87586 | overlap 2464016 AGCTGCTCTTGCTCA CCTCAGTCACTTAG TTAT CTAAGTGACTGAGG ATTTACTCGATTGCT TERM 2652 2464165 - 2464197 + T 71 -9.1 -3.31416 | opp_overlap 2464164 2464166, overlap 2464168 AAGGATAATTAAGAT ACATTGCCCCGGGGT TGA ACTATGGGGCAATGA TTAACTCTTTATTTT TERM 2653 2464168 - 2464194 + T 70 -9.4 -2.8084 | opp_overlap 2464166 2464164, overlap 2464165 GATAATTAAGATACA TTGCCCCGGGGT TGA ACTATGGGGCAA TGATTAACTCTTTAT YPO2187 2464546 - 2464223 - | dsDNA-mimic protein cls 2466171 - 2464711 - | cardiolipin synthetase YPO2189 2466488 - 2466240 - | hypothetical protein TERM 2654 2466390 - 2466416 + g 78 -10.1 -3.82218 | gap 1, opp_overlap 2466378, overlap 2466384 2466389 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCTCTGCCT TERM 2655 2466811 - 2466827 + H 100 -8.7 -5.48213 | opp_overlap 2466810 2466813 ATTATGGTAATAAGG CAGTCTC TAT GAGGCTG TTTTTGTTTTGAATC ail 2467211 - 2467750 + | attachment invasion locus protein precursor YPO2191 2467971 - 2468234 + | hypothetical protein TERM 2656 2468317 - 2468278 - T 100 -11 -6.15536 | opp_overlap 2468280 2468282 2468285 2468288, overlap 2468279 2468280 AATTAACAAAAAAAA CTTATAATAATACGCCTA GCTT TAGGCGTATTATTATATC TAGTGTCTACAACCG TERM 2657 2468316 - 2468279 - T 100 -14.5 -4.25661 | opp_overlap 2468280 2468282 2468285 2468288, overlap 2468278 2468280 ATTAACAAAAAAAAC TTATAATAATACGCCTA GCTT TAGGCGTATTATTATAT CTAGTGTCTACAACC TERM 2658 2468315 - 2468280 - T 100 -18 -3.12957 | opp_overlap 2468280 2468282 2468285 2468288, overlap 2468279 2468278 TTAACAAAAAAAACT TATAATAATACGCCTA GCTT TAGGCGTATTATTATA TCTAGTGTCTACAAC TERM 2659 2468280 - 2468315 + T 100 -18 -2.88999 | opp_overlap 2468280 2468279 2468278, overlap 2468282 2468285 2468288 TTAACAAAAAAAACT TATAATAATACGCCTA GCTT TAGGCGTATTATTATA TCTAGTGTCTACAAC TERM 2660 2468282 - 2468313 + T 100 -16.2 -2.99545 | opp_overlap 2468280 2468279 2468278, overlap 2468280 2468285 2468288 AACAAAAAAAACTTA TAATAATACGCCTA GCTT TAGGCGTATTATTA TATCTAGTGTCTACA TERM 2661 2468285 - 2468310 + T 100 -13.5 -3.63762 | opp_overlap 2468280 2468279 2468278, overlap 2468282 2468280 2468288 AAAAAAAACTTATAA TAATACGCCTA GCTT TAGGCGTATTA TTATATCTAGTGTCT TERM 2662 2468288 - 2468307 + T 90 -10.8 -3.94067 | opp_overlap 2468280 2468279 2468278, overlap 2468285 2468282 2468280 AAAAACTTATAATAA TACGCCTA GCTT TAGGCGTA TTATTATATCTAGTG YPO2192 2469114 - 2468818 - | YciI-like protein tonB 2469415 - 2470173 + | transport protein TonB TERM 2663 2470235 - 2470214 - T 84 -10.1 -3.74693 | TGCCACCGTATTAAA GGTGATCGC TCAG GCGGTCACC GAACTCGATAATAAA y1062 2471417 - 2470209 - | transposase for the IS285 insertion element TERM 2664 2471518 - 2471535 + r 100 -14.1 -4.12603 | CTGTCACCAACCTCA GGGCCGC TTTT GCGGCCC TTCTTGTTTGATCAA YPO2195 2472014 - 2471565 - | acyl-CoA thioester hydrolase ispZ 2472636 - 2472094 - | intracellular septation protein A TERM 2665 2474647 - 2474669 + r 100 -16.4 -4.68593 | TGTCTACAGTTTGAA CGCCTGATGT AAT ACATCAGGCG TTTTTGAATGATACA YPO2199 2475492 - 2474722 - | hypothetical protein YPO2200 2475654 - 2475869 + | hypothetical protein TERM 2666 2475920 - 2475900 - f 73 -8.4 -3.57715 | AAAAGATACGAAAGA TGTGATCT CGATT AGATCACA AATACTCATTTGTAG TERM 2667 2475971 - 2475923 - f 100 -13.6 -4.03078 | gap 1, overlap 2475925 2475926 CGATTAGATCACAAA TACTCATTTGTAGGTATATTCAC CCCC GTAAATATACCTACAAATG-GAA TGGATAATGAAAAAA TERM 2668 2475969 - 2475925 - f 100 -16.2 -3.60505 | gap 1, overlap 2475923 2475926 ATTAGATCACAAATA CTCATTTGTAGGTATATTCAC CCCC GTAAATATACCTACAAATG-G AATGGATAATGAAAA TERM 2669 2475969 - 2475926 - f 100 -16.4 -2.7558 | overlap 2475925 2475923 TTAGATCACAAATAC TCATTTGTAGGTATATTCAC CCCC GTAAATATACCTACAAATGG AATGGATAATGAAAA ompW 2475978 - 2476613 + | outer membrane protein W TERM 2670 2476723 - 2476755 + T 89 -7 -5.30155 | gap 1, opp_overlap 2476729, overlap 2476727 2476729 CATCAGTTAGGCGGG CAGTAAGGAGGTGCG GTTA TGCGCCTCC-TCCTG TTTTTTACTTAATCA TERM 2671 2476729 - 2476750 + T 74 -10.1 -3.11487 | opp_overlap 2476729, overlap 2476727 2476723 TTAGGCGGGCAGTAA GGAGGTGCG GTTA TGCGCCTCC TCCTGTTTTTTACTT YPO2202 2477074 - 2476760 - | putative lipoprotein TERM 2672 2477328 - 2477296 - R 76 -7.8 -4.13343 | overlap 2477298 AGAAATGGCTGAAAA TAGCGCCTGTTT CATGTAAAC AAACAGGCGCTG AAGGGCGGTAATGAC TERM 2673 2477326 - 2477298 - R 82 -10.4 -3.65832 | overlap 2477296 AAATGGCTGAAAATA GCGCCTGTTT CATGTAAAC AAACAGGCGC TGAAGGGCGGTAATG TERM 2674 2477423 - 2477434 + r 72 -7.2 -3.91196 | opp_overlap 2477420 AAATAATAACTAGCT GCGG GTTG CCGC TTTCATCTCTGTGAC trpA 2478223 - 2477417 - | tryptophan synthase subunit alpha TERM 2675 2477543 - 2477560 + g 79 -8.3 -4.4078 | opp_overlap 2477532 2477535 AATAGCACCCGCCGC GCCCGCC GCCA GGCTGGC TTTTACTTGCGCGGG trpB 2479413 - 2478223 - | tryptophan synthase subunit beta trpC 2480997 - 2479570 - | bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase trpD 2481999 - 2481001 - | anthranilate phosphoribosyltransferase TERM 2676 2481175 - 2481193 + g 73 -5.2 -4.63932 | opp_overlap 2481175 TTTACCTTGTAACAA CCGTGCTA AAA TGTCACGG TTTTCTTCCGGCATA TERM 2677 2481926 - 2481944 + g 71 -5.3 -4.46854 | gap 1 TCACCACGTACAATC GCC-GCAA ACAG TTGCTGGC TTTCTTCTTGGCTCA trpG 2482592 - 2482014 - | anthranilate synthase component II trpE 2484157 - 2482592 - | anthranilate synthase component I TERM 2678 2484233 - 2484219 - R 100 -11.4 -5.64274 | CTATCCATAAAAAAA CCCGCT ATT AGCGGG CTGAAGCAATCTGCA YPO2209 2484335 - 2484273 - | putative trp operon leader peptide YPO2210 2484492 - 2484364 - | hypothetical protein trpH 2484609 - 2485508 + | hypothetical protein YPO2212 2485525 - 2486145 + | hypothetical protein TERM 2679 2486341 - 2486326 - f 83 -9 -4.16681 | AATATTAGTGTAAAA TGTCCG GCCA CGGACA AGTGTGTGTGCCAGT TERM 2680 2487258 - 2487236 - g 70 -9 -3.55801 | ATTAATTTGCCGAAA GGCCTGCCAC GGG GTGGCTGGAC TGAACTGGATCTTAA YPO2213 2486492 - 2487526 + | 23S rRNA pseudouridylate synthase B TERM 2681 2487591 - 2487628 + T 75 -5.7 -4.63542 | gap 1, opp_overlap 2487591 2487592, overlap 2487595 TAGCGACGTGAATAA TGCTTATTGCCGCAGTTT TTT GGACTGCGGCAATAT-TA TTTTTAACGCTTATA TERM 2682 2487595 - 2487625 + T 100 -15.6 -4.42235 | opp_overlap 2487591 2487592, overlap 2487591 GACGTGAATAATGCT TATTGCCGCAGTTT TTT GGACTGCGGCAATA TTATTTTTAACGCTT btuR 2488239 - 2487649 - | cob(I)yrinic acid a,c-diamide adenosyltransferase YPO2215 2489017 - 2488256 - | short chain dehydrogenase TERM 2683 2488400 - 2488413 + g 76 -8.1 -4.21439 | overlap 2488408 ATCTTCATCGGGGAA TGCGG TCGC CCGCA TTTGTGTTCGGGTTC TERM 2684 2489527 - 2489562 + G 85 -12.8 -3.67 | gap 1, overlap 2489525 2489531 AGGGAGCATTGGGGC GCAGGAGGTCTCTTCAT TAC GTGAAGAGATCTC-TGC TATTTTGGCCGTTGC TERM 2685 2489531 - 2489559 + G 80 -13.3 -2.93891 | overlap 2489527 2489525 AGCATTGGGGCGCAG GAGGTCTCTTCAT TAC GTGAAGAGATCTC TGCTATTTTGGCCGT TERM 2686 2489712 - 2489724 + G 77 -10.5 -3.54951 | opp_overlap 2489709, overlap 2489723 CGGTTGATAAAGTTG CCGCC AGT GGCGG TTATATGATGGCCTG sohB 2489189 - 2490235 + | putative periplasmic protease TERM 2687 2490298 - 2490267 - T 73 -7.3 -4.18488 | opp_overlap 2490267 2490268, overlap 2490268 AGTGATGGCAATAAA TGCAGGGGGTA ATCTGAACGG TACCCCCTGCT ATTTGCTACCAACCC TERM 2688 2490297 - 2490268 - T 79 -10.8 -3.10611 | opp_overlap 2490268 2490267, overlap 2490267 GTGATGGCAATAAAT GCAGGGGGTA ATCTGAACGG TACCCCCTGC TATTTGCTACCAACC TERM 2689 2490268 - 2490297 + T 83 -10.8 -3.44848 | gap 1, opp_overlap 2490267 2490268, overlap 2490267 GTGATGGCAATAAAT GCAGGGGGTAATC TGAAC GGT-ACCCCCTGC TATTTGCTACCAACC YPO2217 2490605 - 2490354 - | hypothetical protein YPO2217a 2490623 - 2490997 + | hypothetical protein TERM 2690 2491001 - 2490987 - f 80 -5 -5.13344 | overlap 2490988 ACAGCAAGATAAAAA CCTTCT TTT AGAAGA AATAATTTAGGTAAA TERM 2691 2491249 - 2491233 - g 76 -6.5 -4.55446 | GAAGAAAGACGAAAA GGTTGCC TTA GTCAACC GTATGGGGGTCGATC TERM 2692 2491963 - 2491952 - g 87 -4.4 -5.40072 | TTGGTGTGAAAAAAA CCAT GATG ATGG CACAGCGCCTGTATG topA 2491024 - 2493639 + | DNA topoisomerase I TERM 2693 2493700 - 2493716 + F 100 -9.4 -5.46657 | opp_overlap 2493700 2493699 CTGACCTCGGTAAAG CCAGCC TTCGC GGCTGG TTTTTTATTGGGCTA cysB 2494036 - 2495010 + | transcriptional regulator CysB YPO2220 2495346 - 2496203 + | hypothetical protein TERM 2694 2496639 - 2496657 + G 77 -11.7 -3.11768 | opp_overlap 2496637 TATTACTACTACAGC CTGCCGC AATTG GCGGCAG TGTTGGGTGATATCA acnA 2496567 - 2499239 + | aconitate hydratase TERM 2695 2499345 - 2499371 + T 91 -10.2 -4.16033 | opp_overlap 2499345 TTATCAGCCTCTAAA GGGTAGGTATAA TTA TTGAACCTACCC TTATTCTTATTTCGC ribA 2499993 - 2499403 - | GTP cyclohydrolase II TERM 2696 2499516 - 2499532 + g 70 -4.3 -4.70626 | overlap 2499528 2499531 TATTGATCCCCGCTT GGGTGAG GAT CTCGACC TTTTTAGGGTTGTTG TERM 2697 2499964 - 2499943 - G 72 -3.7 -4.77438 | opp_overlap 2499948, overlap 2499945 ACCGACCATTAAAAA GTCACCC CAAGGAGT GGGTAAC TTTGCTTCTGCTACA pgpB 2500499 - 2501260 + | phosphatidylglycerophosphatase B YPO2224 2501429 - 2501740 + | hypothetical protein TERM 2698 2502372 - 2502362 - g 74 -2.4 -5.08824 | overlap 2502363 GGGTTACTGAAAAAA GCGG CAA CGGC GGATAAACAATGTGC YPO2225 2501747 - 2502916 + | hypothetical protein TERM 2699 2503003 - 2502984 - T 71 -10 -2.63073 | opp_overlap 2502983 2502984, overlap 2502983 2502981 CTTTGCTAATAAGAT CGGGTGAA CGGG TCCACCCG GTTGTTAGCTGTTGT YPO2226 2503340 - 2503038 - | hypothetical protein pyrF 2503807 - 2504544 + | orotidine 5'-phosphate decarboxylase YPO2228 2504544 - 2504870 + | translation initiation factor Sui1 TERM 2700 2504938 - 2504901 - T 95 -13.8 -2.87132 | gap 1, opp_overlap 2504901 2504906, overlap 2504906 TTTTCCGCGCAGATA TAAAATACGGCGT-TGA TATTG TCAAACGCCGTATTTTA TTTAGAACTTCTAAT TERM 2701 2504901 - 2504938 + T 100 -14.5 -3.62859 | gap 1, opp_overlap 2504901 2504906, overlap 2504906 TTTTCCGCGCAGATA TAAAATACGGCGT-TGAT ATT GTCAAACGCCGTATTTTA TTTAGAACTTCTAAT TERM 2702 2504906 - 2504933 + T 100 -10 -4.88405 | gap 1, opp_overlap 2504906 2504901, overlap 2504901 CGCGCAGATATAAAA TACGGCGT-TGAT ATT GTCAAACGCCGTA TTTTATTTAGAACTT TERM 2703 2504933 - 2504906 - T 100 -9.3 -4.60797 | gap 1, opp_overlap 2504901 2504906, overlap 2504901 CGCGCAGATATAAAA TACGGCGT-TGA TATTG TCAAACGCCGTA TTTTATTTAGAACTT osmB 2505323 - 2505108 - | lipoprotein araD 2505803 - 2506498 + | L-ribulose-5-phosphate 4-epimerase TERM 2704 2506520 - 2506541 + T 70 -5.1 -4.56597 | AACATAAATAATGAG CCCGTGT TCAGTCTT GCACGGG TTTTTCCAGCCAGAG YPO2231 2506775 - 2506527 - | hypothetical protein mipB 2507109 - 2507774 + | fructose-6-phosphate aldolase TERM 2705 2507860 - 2507830 - T 100 -13.5 -4.18506 | overlap 2507816 2507833 TGAGCGGTAAAAGAA TAACGCCCTATAA AATCA CTATAGGGCGTTA CGGTGTCACTAATTT TERM 2706 2507857 - 2507833 - T 93 -10.8 -4.20868 | overlap 2507816 2507830 GCGGTAAAAGAATAA CGCCCTATAA AATCA CTATAGGGCG TTACGGTGTCACTAA YPO2233 2508196 - 2507891 - | hypothetical protein cstA 2510255 - 2508189 - | putative carbon starvation protein A TERM 2707 2508445 - 2508455 + g 73 -5.4 -4.74132 | opp_overlap 2508445 GCTTGAGCAAGGAAG CCAA TAC TTGG TTTTTCATGGAATAT TERM 2708 2508973 - 2508989 + g 70 -8.7 -3.53733 | overlap 2508971 2508974 TTTTCACCAACATCT TTGGCGA CCA TCGCCAG TGTTTCTGGCGTAAC TERM 2709 2510551 - 2510586 + r 71 -9.6 -3.03124 | opp_overlap 2510556, overlap 2510556 GCAAACATAACATTA AAAAAGCCGTCGGGGG AATT CCTCCGACGGCTATCA TGTTAAAACATAAGA TERM 2710 2510556 - 2510581 + r 100 -18.3 -2.9155 | opp_overlap 2510556, overlap 2510551 CATAACATTAAAAAA GCCGTCGGGGG AATT CCTCCGACGGC TATCATGTTAAAACA TERM 2711 2510581 - 2510556 - R 100 -16.1 -5.30189 | opp_overlap 2510551 2510556 CATAACATTAAAAAA GCCGTCGGGGG AATT CCTCCGACGGC TATCATGTTAAAACA rnb 2512539 - 2510605 - | exoribonuclease II TERM 2712 2512114 - 2512125 + g 76 -7.2 -4.2828 | opp_overlap 2512114 TAGGTCAGCCTGAAA GGCG CGGT CGCC TTTTAATGGGTGGCG TERM 2713 2512307 - 2512297 - G 70 -3.2 -4.86033 | AAAGCGGGATAAAAA TGGC TCA ACCA ATGTTTCAGGTTCAG TERM 2714 2513273 - 2513244 - g 86 -6.5 -4.95547 | gap 1, opp_overlap 2513247 2513261, overlap 2513247 GTTACAAGAAGAAAA TAATGCC-TACCGT AAA ACGGTATGGCATCT CTTGCCGCTACTGAT TERM 2715 2513247 - 2513270 + G 71 -10.4 -3.08073 | gap 1, opp_overlap 2513247 2513244, overlap 2513261 ACAAGAAGAAAATAA TGCC-TACCGT AAA ACGGTATGGCA TCTCTTGCCGCTACT TERM 2716 2513270 - 2513247 - g 91 -10.4 -4.55653 | gap 1, opp_overlap 2513247 2513261, overlap 2513244 ACAAGAAGAAAATAA TGCC-TACCGT AAA ACGGTATGGCA TCTCTTGCCGCTACT YPO2237 2513188 - 2514498 + | putative integral membrane protein TERM 2717 2515016 - 2514998 - g 70 -4.6 -4.66609 | opp_overlap 2514998 2515002 TATGGTACGCAAAAA GCATTAAA CGA TTTATTGC TGTCTGATTACAGCC YPO2238 2514533 - 2515534 + | hypothetical protein nth 2516358 - 2515717 - | endonuclease III TERM 2718 2516324 - 2516343 + g 85 -3.5 -5.48514 | TTGTTATCCCGCAGA CGGGTCA AAATAG TGACACG TTTTTCTTTATTCAT YPO2240 2517056 - 2516355 - | SoxR-reducing system protein RsxE TERM 2719 2516933 - 2516912 - G 70 -8.7 -3.59202 | TATTGGTACACACAA GGACTAGCG TGGT CGCTAACCC CAGCCCCAATGCGTT TERM 2720 2517026 - 2517039 + g 70 -3.1 -4.75174 | TATTTTTCCACAACC CTTGT GCTA ACAGG TTTTTCGCTTCACTC YPO2241 2517682 - 2517053 - | electron transport complex protein RnfG rnfD 2518747 - 2517692 - | electron transport complex protein RnfD TERM 2721 2519585 - 2519563 - g 90 -8.4 -5.03314 | overlap 2519565 CGTACCTTTAAAAAA CGGTTTGGCG TGA CACCAAACAG CTTCCGCCAGATGAA YPO2243 2519275 - 2520168 + | putative AraC-family transcriptional regulatory protein YPO2244 2522135 - 2520273 - | electron transport complex protein RnfC TERM 2722 2521136 - 2521166 + g 77 -9.8 -3.6682 | opp_overlap 2521131 CCCCCATAATCACCA TTGGCGGGTTTTGA GGC TTGAAACCGGCCAA TTTAAGTAAATACAG TERM 2723 2521760 - 2521772 + g 70 -9.1 -3.61398 | CGCGCTGGCGATAGT CAGCC CAC GGCTG TTGTTCACGCCAGCG YPO2245 2522751 - 2522185 - | electron transport complex protein RnfB TERM 2724 2522513 - 2522532 + g 86 -9.2 -4.54301 | AGTTTCAGCATCACC TGCTCGCC ACCC GGCGCGCA TTTGTTGATTTTTTC YPO2246 2523332 - 2522751 - | Na(+)-translocating NADH-quinone reductase subunit E TERM 2725 2523385 - 2523360 - R 87 -5.4 -5.55855 | CCTAAAAAAATAAAA GCCGCCTATT ATCCAA AATTGACGGC CCGACGACAACAGAT YPO2247 2523903 - 2523460 - | hypothetical protein TERM 2726 2523530 - 2523519 - G 80 -4.4 -5.1963 | overlap 2523521 TGTAAGGAACAAAAA TAGC TGCA GCTA GCAGCGGCCACCCGA TERM 2727 2523535 - 2523521 - G 71 -7.1 -4.21997 | overlap 2523519 TAAGGAACAAAAATA GCTGC AGCTA GCAGC GGCCACCCGAGTGTT TERM 2728 2525158 - 2525142 - H 76 -10.9 -2.59793 | overlap 2525141 2525139 TGAGTTAGATAATAT CCGTGAT TTC ATCACGG GTTCGGCCCTGACAT TERM 2729 2525337 - 2525352 + H 81 -7.5 -4.65895 | overlap 2525326 TCTCTGTGGTTTTGC CGCGC AAAACG GCGCG TTTTTGACTGAAACG YPO2252 2527832 - 2529970 + | putative toxin transport protein TERM 2730 2530096 - 2530112 + T 70 -5.1 -4.49311 | opp_overlap 2530058 2530054, overlap 2530060 2530097 CAGGCCTCTGAGGGT GTCGCTA TCA TAGCGAA TTTTATAATACTGAT araA 2531662 - 2530160 - | L-arabinose isomerase araB 2533449 - 2531746 - | ribulokinase TERM 2731 2534104 - 2534062 - g 74 -6.8 -4.38712 | CCGATGGTGAGAAAA CCCTGAACGCCATCGACAGC CTG GCGGCCAGTGGTGCCCAAGG TTTTGTTATTTGTAC araF 2533857 - 2534840 + | L-arabinose-binding periplasmic protein precursor TERM 2732 2536102 - 2536089 - g 70 -8.1 -3.71848 | CTGTCTGATTAACAA CCGCT GGGA AGCGG ATAATGCGTTGCTGC araG 2534938 - 2536509 + | L-arabinose transporter ATP-binding protein araH 2536527 - 2537576 + | L-arabinose transporter permease protein araC 2537797 - 2538729 + | DNA-binding transcriptional regulator AraC TERM 2733 2539896 - 2539880 - g 80 -2.2 -5.49569 | GATCAACAGAAAAAA GCACTG CCGAT CATTGC TAAAAATTGATGTTT YPO2259 2538857 - 2539906 + | putative oxidoreductase TERM 2734 2539951 - 2539978 + F 100 -7.8 -6.32976 | gap 1, opp_overlap 2539949 2539964 AGGGTGGAAATATCT CTCTGGG-CAC AATCTCC GTGGCCCAGAG TTTTTTTATTTTTTT TERM 2735 2540711 - 2540691 - g 90 -6.1 -5.27923 | opp_overlap 2540691, overlap 2540693 GAACGGCACAAAAAA CTGGTCAAT ATC ACTGACCGG TCATCTATTTTGTTG YPO2260 2540100 - 2541128 + | hypothetical protein TERM 2736 2541484 - 2541472 - g 100 -4.8 -5.98781 | GATAATGAAAAAAAA CTGC ATATA GCAG AAATAGATAAAGGTA YPO2261 2541334 - 2541933 + | hypothetical protein TERM 2737 2541959 - 2541930 - T 91 -13.7 -2.51657 | opp_overlap 2541936, overlap 2541936 AAAGAGAATAGAGAT TTAAAACGGAGCC AATG GGCTCCGTTTTTA TCAAACAAATATAAT TERM 2738 2541953 - 2541936 - T 100 -12.7 -4.27861 | opp_overlap 2541936, overlap 2541930 AATAGAGATTTAAAA CGGAGCC AATG GGCTCCG TTTTTATCAAACAAA TERM 2739 2541936 - 2541953 + T 100 -12.7 -4.82901 | opp_overlap 2541936 2541930 AATAGAGATTTAAAA CGGAGCC AATG GGCTCCG TTTTTATCAAACAAA YPO2262 2543526 - 2541982 - | hypothetical protein TERM 2740 2542340 - 2542350 + g 79 -5.4 -5.00616 | ATTGGAATGCTCAGG TTGG CGT CCAA TTTTTTCACCGCGGG TERM 2741 2542425 - 2542443 + g 74 -7.4 -4.13748 | TCAGTTCGATATTCA GGGTAAAG GTA CTTTCCCC TTTAGTATTTTTCCA TERM 2742 2543639 - 2543626 - R 71 -3.1 -5.07107 | GAAATCCCCAAAAAA GAAGA TATA TCTCC CAAATAATATAGGCC manA 2544941 - 2543766 - | mannose-6-phosphate isomerase TERM 2743 2544584 - 2544603 + g 70 -2.8 -4.86731 | gap 1, overlap 2544587 TGCGCTCAGCCGCAT CCA-GTGGG ATA CCTGCCTGG TTTTCTTTAGCAAAA fumC 2545225 - 2546622 + | fumarate hydratase TERM 2744 2546645 - 2546665 + T 79 -6.8 -4.62783 | opp_overlap 2546645 ACATTGTTATATTAA CGCCGG GGTGGATTA CCGGCG TTTTTACAGTGGCTA tus 2547637 - 2546702 - | DNA replication terminus site-binding protein TERM 2745 2547047 - 2547060 + g 82 -3.7 -5.29782 | TGGAGGAACAGCTCG GCCAG CATT CAGGC TTTTTTCTAGCTGTA YPO2266 2549140 - 2548022 - | hypothetical protein TERM 2746 2550313 - 2550300 - H 87 -5.3 -5.47846 | overlap 2550307 AAGGAAAAAAGAAAA CACAT GATT ATGTG CAGCAAATCACATAA mlc 2550453 - 2551670 + | putative ROK family transcriptional regulatory protein TERM 2747 2551705 - 2551681 - f 75 -10.3 -2.84602 | opp_overlap 2551685 2551688, overlap 2551680 2551688 GCTAGTGTATTAAAT CTAATAATTAA GAG TTAATTATTAG TGGGTACCTTCGGTC bioD 2551894 - 2552562 + | putative dethiobiotin synthetase YPO2270 2553947 - 2552703 - | putative voltage-gated ClC-type chloride channel ClcB TERM 2748 2553252 - 2553238 - G 74 -4.9 -4.85782 | GCTTTTAAAAATAAA GGGCC GCTGA AGCCC GCCATTAATCCTAGA TERM 2749 2554196 - 2554231 + r 75 -9 -3.60627 | opp_overlap 2554198, overlap 2554198 ACTCGTTATGTTGAA AAGGCCGCTGCG AAAATCGAATCC CGCAGCGGCCTC TTTAGCATAACGTCA TERM 2750 2554198 - 2554229 + r 86 -11.6 -3.38224 | opp_overlap 2554198, overlap 2554196 TCGTTATGTTGAAAA GGCCGCTGCG AAAATCGAATCC CGCAGCGGCC TCTTTAGCATAACGT TERM 2751 2554229 - 2554198 - R 100 -15.9 -4.11216 | opp_overlap 2554198 2554196 TCGTTATGTTGAAAA GGCCGCTGCGAAA ATCGAA TCCCGCAGCGGCC TCTTTAGCATAACGT YPO2271 2554636 - 2554373 - | hypothetical protein YPO2272 2555065 - 2554658 - | hypothetical protein TERM 2752 2555107 - 2555131 + r 100 -13.7 -4.14541 | opp_overlap 2555107 TCGCACAATCCAGAA CGTGCAGTGTT GGT AATACTGCACG TTTGTCTCATTCCTG TERM 2753 2555131 - 2555107 - R 89 -11.5 -3.45054 | opp_overlap 2555107 TCGCACAATCCAGAA CGTGCAGTGTT GGT AATACTGCACG TTTGTCTCATTCCTG YPO2273 2555584 - 2555162 - | hypothetical protein YPO2274 2555780 - 2556832 + | hypothetical protein YPO2275 2556844 - 2557161 + | hypothetical protein YPO2276 2557164 - 2557415 + | putative phage-related membrane protein YPO2276a 2557412 - 2557684 + | putative phage-related membrane protein TERM 2754 2557697 - 2557717 + F 100 -9.7 -4.43309 | overlap 2557698 TAAATTCATTATTCA TGGGCGATG CAA TATCGCCCG TTTTACTTGAGGTTA TERM 2755 2557698 - 2557716 + F 81 -11 -3.25262 | overlap 2557697 AAATTCATTATTCAT GGGCGATG CAA TATCGCCC GTTTTACTTGAGGTT YPO2277 2557749 - 2559461 + | hypothetical protein YPO2278 2559474 - 2559761 + | putative phage-related membrane protein YPO2279 2559765 - 2560790 + | putative phage-related membrane protein YPO2280 2560790 - 2562034 + | putative phage-related secreted protein TERM 2756 2562089 - 2562116 + F 73 -5.7 -4.4458 | ATGAACAGTACGACA TCTTCTAGGTA TTCAGT TACTTAGAGGA TTTATTATGTCTGTA TERM 2757 2562171 - 2562137 - f 82 -5.7 -5.0133 | gap 1, opp_overlap 2562140 TATGTCTGTAAAAAA TAAGGCGCGTGACCGA CTTC CCGGTGGC-CGCCTTA AGTCTTATCGTCGTG TERM 2758 2562482 - 2562443 - f 72 -7.8 -3.81488 | opp_overlap 2562456, overlap 2562417 TGTTTTGAAAGATAA CGCCGGTCAGTGACAAAA CTTG TTTTGTTGCTGTCCGGGG TTGGCCAAGCCGTAC YPO2281 2562517 - 2562765 + | hypothetical protein YPO2282 2563203 - 2563093 - | hypothetical protein YPO2283 2564341 - 2563325 - | putative LacI-family transcriptional regulatory protein YPO2284 2564878 - 2564405 - | hypothetical protein YPO2285 2565645 - 2565022 - | putative ribose-binding periplasmic protein (partial) TERM 2759 2566077 - 2566052 - g 70 -10.5 -3.01708 | gap 1, opp_overlap 2566051 2566052 CAAAGGGGATAGATA TTGCTCCCGCAA TCG TCGCGGG-GCAA ATTGATATAGCGGCC TERM 2760 2566543 - 2566522 - g 75 -8.7 -3.93583 | GAAGCCATGTATAAA GAGAAGCCA GAGG TGGCTGCTC GCGTACTTAAACTGT YPO2286 2565808 - 2566839 + | hypothetical protein TERM 2761 2567248 - 2567268 + G 95 -2.3 -5.86965 | overlap 2567249 GCGATGCTGTGGTTC GGCCTGGGG AAT CCGCCGGCA TTTTTTTTGATAAGT YPO2287 2566843 - 2567664 + | putative transport system permease TERM 2762 2567799 - 2567811 + T 72 -6.3 -4.29493 | AATAAATCTTCATAT TTCAC ATG GTGAA TTTGTCTGTTTACTG amn 2569595 - 2567955 - | AMP nucleosidase TERM 2763 2568762 - 2568788 + g 73 -3 -5.00616 | overlap 2568764 CTGCCCATTTTTGGC TATCAGGTGATA GGC TGGCATCTGATG TTTTTTCCACGCCAG TERM 2764 2569111 - 2569129 + g 90 -11.8 -4.09243 | ATCGTTTCAATTCCG TCGGTGAT GCC ATCACCGA TTTTAGCCAGATCTG TERM 2765 2570139 - 2570119 - g 72 -3.9 -4.77925 | overlap 2570120 AAAAAATCGGAAAAA GCCGCACAA CAG TTGTTCGGG GCATTACTCGCGAAA TERM 2766 2570380 - 2570366 - g 73 -5.6 -4.62904 | opp_overlap 2570373 AAATACGGGCAAAAA CGGTTG TCA CACCCG CAGCGGTTGAGTTAT YPO2289 2569831 - 2571234 + | putative virulence factor TERM 2767 2571297 - 2571309 + G 79 -7.7 -4.54727 | overlap 2571284 TTCAGGATAGTGGGA TCCAG TTC CTGGA TTTTGCTTTAACGCC TERM 2768 2571429 - 2571449 + G 76 -11.1 -3.30243 | AATATTCACTGATGC TCCCAGGGG CAG CCCCTGAGA TTGTGAAACCTGAAT YPO2290 2571239 - 2574310 + | putative virulence factor TERM 2769 2574810 - 2574836 + G 75 -9.4 -3.82604 | CGCCCGTGCTTTCTT GCTGGATTGCCC TCA GGAAAATCCAGC TTATTCGTTGGATGA YPO2291 2574307 - 2576847 + | putative virulence factor TERM 2770 2576919 - 2576893 - T 91 -7.9 -4.84017 | opp_overlap 2576893 AACGTGCCACAAAAA TGCGCAACTCC CCGAC GGAGAAGCGCA TTTTTTAAACAGCAG TERM 2771 2576893 - 2576919 + T 95 -7.9 -5.00616 | opp_overlap 2576893 AACGTGCCACAAAAA TGCGCAACTCC CCGAC GGAGAAGCGCA TTTTTTAAACAGCAG YPO2292 2577810 - 2577016 - | putative lipoprotein TERM 2772 2578342 - 2578318 - H 100 -15 -3.6292 | gap 1, opp_overlap 2578318 AGAAAGATTCCCAAA CCCCGC-CGGC GCCA GCCGAGCGGGG TTTCTTTTTATCGCC TERM 2773 2578318 - 2578342 + H 100 -15 -4.96501 | gap 1, opp_overlap 2578318 AGAAAGATTCCCAAA CCCCGC-CGGC GCCA GCCGAGCGGGG TTTCTTTTTATCGCC TERM 2774 2579268 - 2579252 - g 77 -10.9 -3.59979 | TCGGGCCATCGGAAA GGCAGAA CAA TTCTGCC CTCATGCCAATATTA ilvB 2578383 - 2580065 + | acetolactate synthase catalytic subunit ilvN 2580067 - 2580369 + | acetolactate synthase 1 regulatory subunit TERM 2775 2580377 - 2580419 + T 100 -15 -3.65046 | opp_overlap 2580366 2580365 2580387, overlap 2580378 AAAGGTGACGTTGTC ACACGTTAAACCCTGTCG TTACTGC CGACAGGGTTTAACGGGC TTATTCGAGTAGGGA TERM 2776 2580378 - 2580418 + T 100 -18.5 -2.78813 | opp_overlap 2580365 2580387, overlap 2580377 AAGGTGACGTTGTCA CACGTTAAACCCTGTCG TTACTGC CGACAGGGTTTAACGGG CTTATTCGAGTAGGG TERM 2777 2580409 - 2580387 - T 82 -10.6 -3.63627 | opp_overlap 2580378 2580377 TTGTCACACGTTAAA CCCTGTCG TTACTGC CGACAGGG TTTAACGGGCTTATT YPO2295 2581110 - 2580436 - | nucleotidase YPO2296 2582626 - 2581241 - | hypothetical protein YPO2297 2583636 - 2582626 - | hypothetical protein TERM 2778 2583754 - 2583738 - R 71 -8.7 -3.39908 | CTTTTTTAAAACAGA CTGCCGT AAC ACAGCAG AAAAACCCATTAATT TERM 2779 2584157 - 2584135 - R 100 -9.9 -4.96646 | gap 1 GGACATAAGCAAAAA TCCCGGC-CA TTAC TGCGCCGGGA CGTTCCAGTGAGATA phoA 2585627 - 2584182 - | bacterial alkaline phosphatase ogt 2585868 - 2586386 + | putative methylated-DNA--protein-cysteine methyltransferase fnr 2586459 - 2587211 + | fumarate/nitrate reduction transcriptional regulator YPO2301 2587346 - 2588302 + | universal stress protein UspE TERM 2780 2588363 - 2588340 - T 100 -13.2 -4.28049 | CGTAAAATCCTAAAA TAAGGGCCAC CGAA GTGGCCCTCA GACTGCTGACAAACC TERM 2781 2588449 - 2588423 - T 84 -10.1 -3.82218 | gap 1, opp_overlap 2588432, overlap 2588424 2588439 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 2782 2588450 - 2588424 - T 72 -10.1 -2.88849 | gap 1, opp_overlap 2588432, overlap 2588423 2588439 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT TERM 2783 2588549 - 2588522 - T 100 -15.6 -3.62046 | overlap 2588523 GCACTTTGTCAATAA CCTCAGGGCCAC CGAA GTGGCCCTGAGC AATACAATGGATGTT TERM 2784 2588548 - 2588523 - T 100 -19.1 -2.77013 | overlap 2588522 CACTTTGTCAATAAC CTCAGGGCCAC CGAA GTGGCCCTGAG CAATACAATGGATGT pntB 2589971 - 2588577 - | pyridine nucleotide transhydrogenase pntA 2591570 - 2590044 - | NAD(P) transhydrogenase subunit alpha TERM 2785 2590517 - 2590542 + g 76 -3.2 -5.19879 | CGCGAATCACGGTAT CGTCGAAATC AATATC GATCTCGCCG TTTTTCTCTTTGCAA YPO2304 2591894 - 2591691 - | hypothetical protein YPO2305 2592100 - 2593053 + | hypothetical protein TERM 2786 2593060 - 2593084 + F 82 -7.8 -4.4727 | overlap 2593063 TTCAAATAATTATCT TAAGGGCGGC CAAGT GCTGCCCTTC TTTTATCCGTGTTGC TERM 2787 2593063 - 2593081 + F 88 -9.5 -4.33785 | overlap 2593060 AAATAATTATCTTAA GGGCGGC CAAGT GCTGCCC TTCTTTTATCCGTGT TERM 2788 2593861 - 2593879 + G 80 -10.4 -3.68619 | GCATCGCATTTAGCC TCGATACT TTT AGTATCGA TTTCACTGGCTTAGC YPO2306 2593323 - 2594714 + | putative amino acid antiporter YPO2307 2595154 - 2594738 - | hypothetical protein TERM 2789 2594963 - 2594985 + g 82 -12 -3.646 | opp_overlap 2594950, overlap 2594964 TACTTGCAGCGCCAA TGCCGTAAGC TGA GCTTGCGGCG TTCTCTCTAATTCAG TERM 2790 2594964 - 2594984 + g 79 -13.3 -2.78278 | opp_overlap 2594950, overlap 2594963 ACTTGCAGCGCCAAT GCCGTAAGC TGA GCTTGCGGC GTTCTCTCTAATTCA rstA 2595451 - 2596197 + | DNA-binding transcriptional regulator RstA rstB 2596225 - 2597502 + | sensor protein RstB YPO2310 2597596 - 2599095 + | putative carboxypeptidase TERM 2791 2599139 - 2599115 - T 100 -9.9 -4.43877 | opp_overlap 2599118, overlap 2599117 2599118 TAATTCGGAAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCATATGCGCCTAT TERM 2792 2599137 - 2599117 - T 100 -12.5 -3.81958 | opp_overlap 2599118, overlap 2599115 2599118 ATTCGGAAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 2793 2599118 - 2599136 + T 100 -16 -4.8048 | opp_overlap 2599117 2599115 2599118 TTCGGAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 2794 2599136 - 2599118 - T 100 -16 -2.88452 | opp_overlap 2599118, overlap 2599117 2599115 TTCGGAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC tnp 2599675 - 2599217 - | transposase for the IS1541 insertion element TERM 2795 2599806 - 2599788 - H 100 -16 -3.07307 | opp_overlap 2599788 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAT TERM 2796 2599788 - 2599806 + H 100 -16 -4.37092 | opp_overlap 2599788 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAT TERM 2797 2601147 - 2601135 - g 76 -4.7 -5.03314 | CTGACGCGGAAAAAA GCCTG AAC CTGGC CGGCGCGTGCGTCAG TERM 2798 2602287 - 2602274 - g 78 -3.8 -5.1861 | CTGAGGAGTAAAAAA TCCG GCGATA CGGA AACGGAAGGCCTGCA TERM 2799 2602561 - 2602536 - g 73 -6.1 -4.47328 | AAGCGGATTACAAAA CCGTCCGCTAC TCTG GTAAGGAACGG GATGCGACGGGGTTG YPO2312 2600645 - 2603269 + | putative insecticidal toxin complex YPO2313 2603272 - 2603628 + | hypothetical protein TERM 2800 2603611 - 2603621 + T 75 -5.4 -4.78752 | ACTCCAGAACATAGT CCAA TTT TTGG TTTTTAAGTTGTAGT TERM 2801 2603687 - 2603656 - T 86 -10.4 -3.79043 | opp_overlap 2603660, overlap 2603675 CATTACTAACCGAAA GATAGTTATATTCA GAAA TGGATATAACTATC CTAAAAAATTCACAC YPO2314 2603941 - 2603735 - | putative invertase protein (partial) TERM 2802 2603772 - 2603791 + g 70 -4.2 -4.65895 | gap 1, opp_overlap 2603772 GCTTCCATAACGAGA CGCG-CCTG TTT TGGGTCGCG TTTTTGCATGACCAA TERM 2803 2604162 - 2604149 - R 74 -8.1 -3.95435 | GGGGTTAAAATATAA GTGGC GTAA GCCAC CGGAGCGCCCCGAGG TERM 2804 2604252 - 2604225 - R 78 -9.2 -3.61715 | opp_overlap 2604232, overlap 2604212 2604226 2604232 TAGCTTTTTCAATAA CCTCAAAGGAGC CAAA GCTCCTTTCAGA CTGCTGACAAACCCC TERM 2805 2604251 - 2604226 - R 75 -10.5 -2.76815 | opp_overlap 2604232, overlap 2604225 2604212 2604232 AGCTTTTTCAATAAC CTCAAAGGAGC CAAA GCTCCTTTCAG ACTGCTGACAAACCC TERM 2806 2604245 - 2604232 - R 70 -8.1 -3.72051 | opp_overlap 2604232, overlap 2604226 2604225 2604212 TTCAATAACCTCAAA GGAGC CAAA GCTCC TTTCAGACTGCTGAC TERM 2807 2604232 - 2604245 + r 70 -8.1 -3.58343 | opp_overlap 2604226 2604225 2604212 2604232 TTCAATAACCTCAAA GGAGC CAAA GCTCC TTTCAGACTGCTGAC TERM 2808 2604336 - 2604310 - R 84 -10.1 -3.82218 | gap 1, opp_overlap 2604319, overlap 2604311 2604326 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 2809 2604337 - 2604311 - R 72 -10.1 -2.88849 | gap 1, opp_overlap 2604319, overlap 2604310 2604326 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT TERM 2810 2604430 - 2604417 - R 70 -8.1 -3.72051 | opp_overlap 2604417, overlap 2604427 GTCAATAACCTCAAA GGAGC CAAA GCTCC TTTTTATAAGGTGAC TERM 2811 2604417 - 2604430 + r 91 -8.1 -4.85599 | opp_overlap 2604417 2604427 GTCAATAACCTCAAA GGAGC CAAA GCTCC TTTTTATAAGGTGAC YPO2315 2605033 - 2604455 - | hypothetical protein YPO2316 2605613 - 2605059 - | hypothetical protein YPO2317 2606008 - 2606220 + | hypothetical protein asr 2606217 - 2606501 + | putative acid shock protein TERM 2812 2606586 - 2606569 - f 93 -12.7 -3.09208 | opp_overlap 2606569, overlap 2606571 AAATGATTCACTCAA CACCCGG TTCT CCGGGTG TTTTTTATCAGGAGT TERM 2813 2606569 - 2606586 + F 100 -12.7 -5.24531 | opp_overlap 2606569 2606571 AAATGATTCACTCAA CACCCGG TTCT CCGGGTG TTTTTTATCAGGAGT TERM 2814 2606584 - 2606571 - f 72 -9.5 -3.10056 | opp_overlap 2606569, overlap 2606569 ATGATTCACTCAACA CCCGG TTCT CCGGG TGTTTTTTATCAGGA YPO2319 2606835 - 2607671 + | putative pepetidase YPO2320 2608050 - 2607727 - | putative DNA-binding phage-related protein YPO2321 2608361 - 2608047 - | hypothetical protein TERM 2815 2608705 - 2608665 - R 100 -8.4 -5.48514 | gap 1, overlap 2608668 ACTAAGAAATAAAAA GAATTCGACGCCTAAGTCT AGAT AG-CTCAGGCGTCGAATAG GGGCATCAATCAGAC TERM 2816 2608702 - 2608668 - R 100 -14.5 -4.78345 | gap 1, overlap 2608665 AAGAAATAAAAAGAA TTCGACGCCTAAGTCT AGAT AG-CTCAGGCGTCGAA TAGGGGCATCAATCA hrpA 2612557 - 2608715 - | ATP-dependent RNA helicase HrpA TERM 2817 2610258 - 2610271 + g 76 -8.1 -4.19624 | opp_overlap 2610256 2610258 TCATCGACCAGAATA TCCCG CCGA CGGGA TTTGTGTTCCAACTC TERM 2818 2612941 - 2612922 - H 72 -6.4 -4.3351 | overlap 2612924 ATAAAATCGAACAAA GAGCGCAA AATA TTGCGCTA TCACTGGTAGCAAAA TERM 2819 2612939 - 2612924 - H 78 -9 -3.75005 | overlap 2612922 AAAATCGAACAAAGA GCGCAA AATA TTGCGC TATCACTGGTAGCAA acpD 2613025 - 2613630 + | azoreductase TERM 2820 2613729 - 2613746 + T 100 -14.1 -5.35222 | AGCCATGTGATGATT GCGCGCC AACC GGCGCGC TTTTTTATGCCTTTT YPO2324 2614707 - 2613751 - | putative transcriptional regulatory protein TERM 2821 2614856 - 2614845 - H 70 -7.2 -3.86283 | TTAACCTACACGAAA GGGC AAAT GCCC AAATATTGAATTTAT TERM 2822 2615622 - 2615599 - g 73 -3.1 -5.00616 | gap 1, overlap 2615600 GGGTGTTGGAAAAAA CCGGTATCGT AGATA ACGCT-CCGG TGATGGGGGAATCAT dalD 2614917 - 2616308 + | putative mannitol dehydrogenase YPO2326 2616880 - 2616509 - | hypothetical protein YPO2327 2617075 - 2616890 - | putative lipoprotein YPO2328 2619777 - 2617081 - | hypothetical protein TERM 2823 2617415 - 2617401 - G 74 -11.4 -3.13908 | opp_overlap 2617398 AACGCAACCAGTCAA TCGCCG CAC CGGCGA CAGTATTGCTCTCAC hslI 2620043 - 2621035 + | D-lactate dehydrogenase hslJ 2621105 - 2621557 + | heat-inducible protein YPO2331 2621956 - 2621615 - | putative lipoprotein YPO2332 2622241 - 2622900 + | putative Mg(2+) transport ATPase qacE 2623298 - 2622960 - | quaternary ammonium compound-resistance protein TERM 2824 2626217 - 2626232 + G 75 -10.4 -3.40403 | opp_overlap 2626215 CGCTGTTCGAATATT CCGGAG CCTG CTCCGG TTGTGGTGAAACACC nifJ 2623771 - 2627304 + | putative pyruvate-flavodoxin oxidoreductase TERM 2825 2627339 - 2627364 + F 100 -13.4 -5.18995 | TGTGCGATTTACTGA GCCAGTTAGC TAAACC GCTAACTGGC TTTTTCTATTATCTT TERM 2826 2627649 - 2627639 - g 86 -8.2 -4.64144 | overlap 2627641 AACAAGCTGCAAAAA CGGC TGC GCCG TAACGTCGGCCAAGC TERM 2827 2628495 - 2628482 - g 74 -2.3 -5.09685 | GAAGACACAGAAAAA CGTCC ACCA GTACG CCTTGATGTGTTGGA YPO2335 2627579 - 2628520 + | C32 tRNA thiolase YPO2336 2628791 - 2629795 + | hypothetical protein TERM 2828 2629798 - 2629821 + F 71 -8.8 -3.38991 | opp_overlap 2629799 2629801, overlap 2629796 2629801 TCATAGCCAGTAAAA ATAGTGGGCC AAAT GGCCCACTGA TGTTATTGGCAAAGT TERM 2829 2629820 - 2629799 - f 100 -10.1 -4.76041 | opp_overlap 2629798 2629796 2629801, overlap 2629801 CATAGCCAGTAAAAA TAGTGGGCC AAAT GGCCCACTG ATGTTATTGGCAAAG TERM 2830 2629801 - 2629818 + F 89 -12.7 -2.85545 | opp_overlap 2629799 2629801, overlap 2629798 2629796 TAGCCAGTAAAAATA GTGGGCC AAAT GGCCCAC TGATGTTATTGGCAA TERM 2831 2629818 - 2629801 - f 100 -12.7 -3.99327 | opp_overlap 2629801 2629798 2629796, overlap 2629799 TAGCCAGTAAAAATA GTGGGCC AAAT GGCCCAC TGATGTTATTGGCAA TERM 2832 2629912 - 2629938 + F 80 -8.7 -3.9749 | gap 1, overlap 2629912 CTTCCATGGGGGCTA G-ATCCGCGCCA CTAC TGGCGCGGACGC TTTACTCTTCTGCCT TERM 2833 2630308 - 2630294 - g 100 -7.2 -5.26875 | opp_overlap 2630294 TTTCTAATGAAAAAA TCAAGA GCA TCTTGA TGGATTACTCATCCC YPO2337 2630107 - 2630946 + | putative regulatory protein TERM 2834 2631122 - 2631099 - T 100 -14 -5.60993 | CGGCGCACAAAAAAA TGCCGATGTT TTTC AACATCGGCA CCGTAACAATTAAAT zntB 2632303 - 2631320 - | zinc transporter TERM 2835 2632515 - 2632485 - R 93 -9 -4.54323 | opp_overlap 2632487, overlap 2632487 2632491 AAGGACAAGAATAAA TGCAAAGGCGGATT TAA AATCCGCCTCTGTT AATTAGTTAAAAACA TERM 2836 2632513 - 2632487 - R 100 -16 -2.57496 | opp_overlap 2632487, overlap 2632485 2632491 GGACAAGAATAAATG CAAAGGCGGATT TAA AATCCGCCTCTG TTAATTAGTTAAAAA TERM 2837 2632487 - 2632513 + r 100 -13.8 -3.45366 | opp_overlap 2632487 2632485 2632491 GGACAAGAATAAATG CAAAGGCGGATT TAA AATCCGCCTCTG TTAATTAGTTAAAAA TERM 2838 2632509 - 2632491 - R 100 -13.2 -3.95772 | opp_overlap 2632487, overlap 2632487 2632485 AAGAATAAATGCAAA GGCGGATT TAA AATCCGCC TCTGTTAATTAGTTA mppA 2634162 - 2632546 - | putative periplasmic murein peptide-binding protein YPO2340 2634540 - 2635310 + | murein peptide amidase A YPO2341 2636326 - 2635352 - | putative mandelate racemase / muconate lactonizing protein TERM 2839 2636361 - 2636377 + H 71 -9.5 -2.98368 | overlap 2636360 ACAGTTTTAGCTTAG GTATGAG ACC CTCATAC GTTTATCCGTTAAGT TERM 2840 2636383 - 2636403 + H 70 -2.5 -5.01732 | overlap 2636384 ACCCTCATACGTTTA TCCGTTAAG TCT TTAAACGGG TTTTTTAGCGAACTT tpx 2636489 - 2636992 + | thiol peroxidase TERM 2841 2637068 - 2637092 + F 100 -7.8 -5.55769 | gap 1, opp_overlap 2637068 TATCGTGACTCAAAA CGGCTG-CCCC ACTC GGGTACAGCCG TTTTTTATTGTGCCC TERM 2842 2637092 - 2637068 - f 88 -10 -4.18494 | gap 1, opp_overlap 2637068 TATCGTGACTCAAAA CGGCTGC-CCC ACTC GGGTACAGCCG TTTTTTATTGTGCCC TERM 2843 2637132 - 2637114 - f 100 -16 -4.37092 | opp_overlap 2637114 ATTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC TERM 2844 2637114 - 2637132 + F 100 -16 -3.07307 | opp_overlap 2637114 ATTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC tnp 2637245 - 2637703 + | transposase for the IS1541 insertion element TERM 2845 2637770 - 2637816 + T 95 -7.2 -5.5762 | opp_overlap 2637761 2637784, overlap 2637777 2637781 2637783 2637784 AACAGAGCCTTATAG GCGCATATGAAAAACCTCCGGC TAT GCCGGAGGATATTTATTTACTC TTTTTTATGTTTGAT TERM 2846 2637777 - 2637809 + T 100 -11.3 -4.20024 | opp_overlap 2637784, overlap 2637770 2637781 2637783 2637784 CCTTATAGGCGCATA TGAAAAACCTCCGGC TAT GCCGGAGGATATTTA TTTACTCTTTTTTAT TERM 2847 2637781 - 2637805 + T 100 -9.9 -4.60648 | opp_overlap 2637784, overlap 2637777 2637770 2637783 2637784 ATAGGCGCATATGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTTACTCTTTT TERM 2848 2637783 - 2637803 + T 100 -12.5 -3.88114 | opp_overlap 2637784, overlap 2637781 2637777 2637770 2637784 AGGCGCATATGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTTACTCTT TERM 2849 2637784 - 2637802 + T 100 -16 -2.91241 | opp_overlap 2637784, overlap 2637783 2637781 2637777 2637770 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTACTCT TERM 2850 2637802 - 2637784 - T 100 -16 -4.8048 | opp_overlap 2637783 2637781 2637777 2637770 2637784 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTACTCT tyrR 2639427 - 2637850 - | DNA-binding transcriptional regulator TyrR YPO2345 2639762 - 2640208 + | hypothetical protein YPO2346 2640270 - 2640728 + | hypothetical protein YPO2347 2641799 - 2640738 - | hypothetical protein TERM 2851 2641159 - 2641177 + g 75 -8.8 -3.85817 | opp_overlap 2641153 2641152 ATCATCAACGCTGAT TCAGCAGC ATA GCGGCTGA TTTCTGCCCGAGCCT YPO2348 2643193 - 2641796 - | hypothetical protein TERM 2852 2642896 - 2642865 - G 74 -7.3 -4.1899 | gap 1, opp_overlap 2642882 TCACTGGAGCGAAAA CGTAACGCCAGACG GATTT CG-CTGACGCCACG GGTCGGCGTTGGCCA pspC 2643860 - 2643501 - | DNA-binding transcriptional activator PspC TERM 2853 2643747 - 2643726 - G 76 -3.1 -5.09173 | gap 1, overlap 2643728 GAATAGGCCAAAAAA CAGTGATAAC ACC ATTATCAC-G CGAACCAACCGTACT TERM 2854 2643746 - 2643728 - G 71 -6.8 -4.16351 | overlap 2643726 ATAGGCCAAAAAACA GTGATAAC ACC ATTATCAC GCGAACCAACCGTAC TERM 2855 2643813 - 2643833 + g 83 -5.3 -5.1675 | overlap 2643821 CCCTTTGATCATGCC CTCTTCCGG TAC CCGGTACAG TTTTTTACTGCCTAA pspB 2644087 - 2643860 - | phage shock protein B pspA 2644914 - 2644249 - | phage shock protein PspA pspF 2645159 - 2646187 + | phage shock protein operon transcriptional activator TERM 2856 2646278 - 2646246 - T 76 -7.7 -4.20696 | opp_overlap 2646253, overlap 2646234 2646250 2646252 2646253 GGACGAAGGGTAAAA TAAATATCCTCCGAC ATA GCCGGAGGTTTTTCA TATGCGCCTATAAGG TERM 2857 2646274 - 2646250 - T 77 -6.3 -4.68655 | opp_overlap 2646253, overlap 2646234 2646246 2646252 2646253 GAAGGGTAAAATAAA TATCCTCCGAC ATA GCCGGAGGTTT TTCATATGCGCCTAT TERM 2858 2646272 - 2646252 - T 80 -8.9 -3.94471 | opp_overlap 2646253, overlap 2646234 2646250 2646246 2646253 AGGGTAAAATAAATA TCCTCCGAC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 2859 2646271 - 2646253 - T 93 -12.4 -2.95598 | opp_overlap 2646253, overlap 2646234 2646252 2646250 2646246 GGGTAAAATAAATAT CCTCCGAC ATA GCCGGAGG TTTTTCATATGCGCC TERM 2860 2646253 - 2646271 + T 100 -10.2 -4.8048 | opp_overlap 2646234 2646253 2646252 2646250 2646246 GGGTAAAATAAATAT CCTCCGAC ATA GCCGGAGG TTTTTCATATGCGCC tnp 2646810 - 2646352 - | transposase for the IS1541 insertion element TERM 2861 2646941 - 2646923 - H 100 -16 -3.07307 | opp_overlap 2646923 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 2862 2646923 - 2646941 + H 100 -16 -4.36914 | opp_overlap 2646923 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 2863 2646977 - 2646960 - H 100 -8.4 -5.24129 | TCTGGGCACAAAAAA GCCAGC ACCCGA GCTGGC TTAAAATACTGGAAG TERM 2864 2647078 - 2647064 - H 70 -5.8 -4.28361 | TGAATCGCATCAAAA TGATAA TAC TTATCA ATATCAATTGTAAAT YPO2354 2647154 - 2647339 + | hypothetical protein sapA 2647475 - 2649121 + | peptide transport periplasmic protein precursor sapB 2649118 - 2650083 + | peptide transport system permease protein sapC 2650070 - 2650960 + | peptide transport system permease protein TERM 2865 2651329 - 2651342 + G 79 -8.1 -4.42238 | opp_overlap 2651327 TGGACATATAAAGGC CGCTG GTGG CAGCG TTTTCATTGGCGTAA sapD 2650960 - 2651952 + | peptide transport system ATP-binding protein sapF 2651952 - 2652767 + | peptide transport system ATP-binding protein TERM 2866 2652808 - 2652827 + F 100 -12.2 -3.96534 | overlap 2652820 CGGTGGTTAACCTCC CCGCTATC TTTT GATAGCGG TTATCTTCTTTTAAC YPO2360 2653157 - 2654437 + | hypothetical protein tppB 2655080 - 2656585 + | putative tripeptide transporter permease TERM 2867 2656615 - 2656596 - f 81 -9.2 -3.77607 | opp_overlap 2656597, overlap 2656597 AATAAGCTGACTAAA CGCGCTCC TGCG GGAGCGCT TTTAGTGCTAGTTAG TERM 2868 2656614 - 2656597 - f 89 -12.7 -2.85841 | opp_overlap 2656597, overlap 2656596 ATAAGCTGACTAAAC GCGCTCC TGCG GGAGCGC TTTTAGTGCTAGTTA TERM 2869 2656597 - 2656614 + F 100 -12.7 -4.33105 | opp_overlap 2656596 2656597 ATAAGCTGACTAAAC GCGCTCC TGCG GGAGCGC TTTTAGTGCTAGTTA YPO2362 2656840 - 2657430 + | hypothetical protein TERM 2870 2657564 - 2657576 + F 74 -4.8 -4.84492 | TCCATCAGCATTGGA GCCT CTAAC AGGC TTTTATTGTCATTAA YPO2363 2657676 - 2657939 + | hypothetical protein YPO2364 2658874 - 2658092 - | transposase/IS protein TERM 2871 2658790 - 2658804 + g 77 -11.4 -3.3506 | overlap 2658803 CTGCCTGTTGTGACA GCGCAG GCG CTGCGC TTATAAGGCTTTCCA y1093 2659893 - 2658871 - | transposase for insertion sequence IS100 TERM 2872 2659915 - 2659897 - H 100 -13.2 -4.01078 | AAAAGTGACCATAAA CTCTCCTG AAT CAGGAGAG CAGATTACCCCCTGG TERM 2873 2660033 - 2660004 - H 72 -9.3 -3.16553 | opp_overlap 2659997, overlap 2660002 ACAACTATCAATACA CTACAGCGGGG GAAATCAT CACCGCTGTAG GACTTGTATTGCCCC gst 2660143 - 2660748 + | glutathionine S-transferase TERM 2874 2660796 - 2660766 - T 100 -15.6 -3.51694 | opp_overlap 2660763, overlap 2660762 AATAATGAGAATCAA TCAATTGCCCCC ATCACTA GGGGGCAATTGA AAATGGTTAGATTAC pdxY 2661668 - 2660808 - | pyridoxamine kinase TERM 2875 2661809 - 2661788 - R 87 -5.1 -5.52384 | opp_overlap 2661791, overlap 2661791 GTCTCAGCAAAAAAA TAAGGGACA TTTC TGCCCCTTC TCTTATTTTACGCTT TERM 2876 2661806 - 2661791 - R 82 -6.8 -4.8487 | opp_overlap 2661791, overlap 2661788 TCAGCAAAAAAATAA GGGACA TTTC TGCCCC TTCTCTTATTTTACG tyrS 2663097 - 2661823 - | tyrosyl-tRNA synthetase TERM 2877 2662207 - 2662222 + g 74 -2.5 -5.21506 | overlap 2662202 AACATATTGCGCGCG CGGTG CTTTAC CACTG TTTTTATCTTCTTCT TERM 2878 2662378 - 2662392 + g 70 -8.6 -3.74693 | CCAGACTGCACCCCC TTCGGT TTT ACCGAA TTTAGTGCCATCGGC pdxH 2663932 - 2663279 - | pyridoxamine 5'-phosphate oxidase YPO2371 2664337 - 2664023 - | putative lipoprotein anmK 2665507 - 2664395 - | anhydro-N-acetylmuramic acid kinase TERM 2879 2665079 - 2665059 - G 70 -8.1 -3.69094 | AACGCATGATGGAAA GCGGGCACC AAG GGGGCCCCC TGCCCGCCATAGGCC pcp 2666063 - 2666530 + | putative lipoprotein TERM 2880 2666582 - 2666612 + T 100 -14.1 -5.34555 | opp_overlap 2666586, overlap 2666586 TAAATCAGAACAGTA AAAACCGGGGTTC ATTGC GAACCCCGGTTTG TTTTTTGTACTGTGG TERM 2881 2666586 - 2666608 + T 100 -14.9 -5.1471 | opp_overlap 2666586, overlap 2666582 TCAGAACAGTAAAAA CCGGGGTTC ATTGC GAACCCCGG TTTGTTTTTTGTACT TERM 2882 2666608 - 2666586 - T 100 -15.6 -4.90906 | opp_overlap 2666582 2666586 TCAGAACAGTAAAAA CCGGGGTTCA TTG CGAACCCCGG TTTGTTTTTTGTACT slyA 2667105 - 2666674 - | transcriptional regulator SlyA TERM 2883 2667267 - 2667247 - R 81 -5.5 -5.24531 | opp_overlap 2667250, overlap 2667250 ATTCTTTAGAAAAAA TGATGTATC AAC GATACATTA CCTCTTAAGGATTAA TERM 2884 2667895 - 2667867 - R 100 -8.9 -4.67942 | CCGAAGAAAGTAAAA CTACGCCAGTC TGAGCGC GATTGGCGTAG AGAAAGATTAAGGGA YPO2375 2668799 - 2667903 - | putative aldo/keto reductase YPO2376 2669296 - 2668931 - | hypothetical protein TERM 2885 2669130 - 2669099 - G 100 -14.6 -4.51097 | gap 1, overlap 2669088 GCAACCACGACAAAA GCCACGGTCATCTGT TTG ACAGAT-ACCGCGGC AGGGGCTGGGAATAT TERM 2886 2669166 - 2669153 - G 80 -3.1 -5.27779 | overlap 2669158 GGGAATATCAAAAAA CTCAA GTTG CTGAG CCACGCTGCCTCCTA TERM 2887 2669469 - 2669480 + G 87 -4.4 -5.40072 | opp_overlap 2669469 GATCCGATTCGACAA TAGC GACA GCTA TTTTTTTGCAGCAAC YPO2377 2669344 - 2670981 + | putative cell division protein TERM 2888 2671141 - 2671160 + F 100 -5.7 -5.80364 | AGACCATAGCCTTGA TGCCAGC GCCTTG GTTGGCA TTTTTTTCTTGACCT YPO2378 2671204 - 2671803 + | TetR-family transcriptional regulatory protein YPO2379 2671891 - 2672988 + | N-ethylmaleimide reductase sepC 2676163 - 2673209 - | insecticial toxin TERM 2889 2676749 - 2676767 + G 70 -4.6 -4.64676 | CTGGCCCGGTAAAAG GCGGTAAT ACC ATTATTGC TTTTGTTGAAGATCC gloA 2676436 - 2676843 + | lactoylglutathione lyase TERM 2890 2676854 - 2676871 + F 87 -8.4 -4.48987 | opp_overlap 2676853 ACTGATTAACTTAAG GGCACC TCGGAC GGTGCC TTTTACTTATCACAA rnt 2676955 - 2677602 + | ribonuclease T TERM 2891 2677642 - 2677625 - T 100 -8.4 -5.26875 | CTTGTAATTAAAAAA GGTGGC CATTAC GCCACC TGAGGTTATTGACAA TERM 2892 2677720 - 2677746 + T 72 -10.1 -2.88849 | gap 1, opp_overlap 2677709, overlap 2677715 2677719 ACATCCATGTAGGCT CGAACCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCTCTGCC TERM 2893 2677810 - 2677827 + T 79 -8.4 -4.15703 | TTGTCAGCAGTCTGA GGTGGC CATTAC GCCACC TTCTTATTTATCACA YPO2383 2678261 - 2677911 - | hypothetical protein YPO2384 2678582 - 2678361 - | hypothetical protein TERM 2894 2678587 - 2678565 - G 91 -7 -5.1287 | opp_overlap 2678565 2678571, overlap 2678568 CTCAGAGTGAAAAAA CAACAATGGC AAC GCCATTAATG TTTTCTCACAATATC TERM 2895 2678584 - 2678568 - G 82 -7.3 -4.65666 | opp_overlap 2678565 2678571, overlap 2678565 AGAGTGAAAAAACAA CAATGGC AAC GCCATTA ATGTTTTCTCACAAT TERM 2896 2678992 - 2678976 - g 70 -2.9 -4.87892 | overlap 2678979 TCGCAATAAAATAAA CAGCAGT CGG ACAACTG AAAGTAAAACTGCAG YPO2385 2678686 - 2679552 + | hypothetical protein TERM 2897 2680117 - 2680105 - g 88 -10.5 -4.1413 | opp_overlap 2680105 2680103 2680101 AAGAGATCGTGAAAA CCGCC AAT GGCGG TGTGTTTAATAATGC TERM 2898 2680105 - 2680117 + G 73 -10.5 -3.31162 | opp_overlap 2680105, overlap 2680103 2680101 AAGAGATCGTGAAAA CCGCC AAT GGCGG TGTGTTTAATAATGC sodB 2679930 - 2680508 + | superoxide dismutase TERM 2899 2680583 - 2680561 - f 100 -16.4 -4.28188 | opp_overlap 2680561 2680564 CATCGATAACATAAA TAAGGGCGGT TTA ACCGCCCTTA TTATTACCATTCACC TERM 2900 2680561 - 2680583 + F 100 -16.4 -3.68222 | opp_overlap 2680561, overlap 2680564 CATCGATAACATAAA TAAGGGCGGT TTA ACCGCCCTTA TTATTACCATTCACC TERM 2901 2680564 - 2680580 + F 100 -13.7 -3.97139 | opp_overlap 2680561, overlap 2680561 CGATAACATAAATAA GGGCGGT TTA ACCGCCC TTATTATTACCATTC TERM 2902 2681763 - 2681746 - g 86 -6.9 -4.9725 | opp_overlap 2681746 2681748, overlap 2681749 ATTCTGACACAAAAA CATCGCC CAAC GGCGGTG TTCTGTGGCGGCGAT purR 2681035 - 2682060 + | DNA-binding transcriptional repressor PurR TERM 2903 2682107 - 2682127 + T 84 -9.8 -3.85092 | opp_overlap 2682110, overlap 2682101 2682110 CCGGCCCGATTCGGA TAACCGCA TTCCC TGCGGTTA TTTGCTATCGATGGT TERM 2904 2682110 - 2682124 + T 72 -7.1 -4.05208 | opp_overlap 2682110, overlap 2682101 2682107 GCCCGATTCGGATAA CCGCA TTCCC TGCGG TTATTTGCTATCGAT YPO2388 2683081 - 2682149 - | putative DNA-binding transcriptional regulator TERM 2905 2682632 - 2682612 - G 74 -4.5 -4.82128 | overlap 2682613 TCACGAAAGACAAAA CGCCCACCC ACT GGGATGGCA CGGGTCGCCCCTATG YPO2389 2683371 - 2684573 + | inner membrane transport protein YdhC cfa 2685053 - 2686204 + | cyclopropane fatty acyl phospholipid synthase TERM 2906 2686214 - 2686243 + T 86 -5.7 -5.3236 | opp_overlap 2686214 2686217 2686219 2686221, overlap 2686217 CGCTAACCTCAGATA GGAGACAGGGG GATAAAAA CCCCTGTCTTA TTTTTTGTAGGTTAT TERM 2907 2686217 - 2686240 + T 100 -9.6 -4.73105 | opp_overlap 2686217 2686214 2686219 2686221, overlap 2686214 TAACCTCAGATAGGA GACAGGGG GATAAAAA CCCCTGTC TTATTTTTTGTAGGT ribE 2686911 - 2686255 - | riboflavin synthase subunit alpha YPO2392 2687160 - 2688533 + | multidrug efflux protein TERM 2908 2688622 - 2688612 - f 82 -6.8 -4.87803 | overlap 2688613 TAGTCTCAAATAAAA GGGA GTC TCCC CAACAACATCTGGAT TERM 2909 2690678 - 2690668 - g 70 -3.2 -4.89393 | GAAACCGCAGAAAAA CTGG AAG CCAA AGTGATTGTGGTCGC pykF 2689564 - 2690976 + | pyruvate kinase TERM 2910 2691031 - 2691002 - f 77 -10.8 -2.77344 | opp_overlap 2691002 2691007, overlap 2691007 TTATTGTTCAATAAT TAAAACGCCGCT CTCTAT AGCGGCGTTTTC TTTTTTAAAGCTTGC TERM 2911 2691002 - 2691031 + F 100 -10.8 -5.055 | opp_overlap 2691002 2691007, overlap 2691007 TTATTGTTCAATAAT TAAAACGCCGCT CTCTAT AGCGGCGTTTTC TTTTTTAAAGCTTGC TERM 2912 2691007 - 2691026 + F 100 -10.7 -5.42198 | opp_overlap 2691002 2691007, overlap 2691002 GTTCAATAATTAAAA CGCCGCT CTCTAT AGCGGCG TTTTCTTTTTTAAAG TERM 2913 2691026 - 2691007 - f 100 -10.7 -4.56133 | opp_overlap 2691007 2691002, overlap 2691002 GTTCAATAATTAAAA CGCCGCT CTCTAT AGCGGCG TTTTCTTTTTTAAAG lpp 2691297 - 2691533 + | major outer membrane lipoprotein TERM 2914 2691573 - 2691555 - f 100 -14.6 -4.8622 | opp_overlap 2691555 TTCCTGAATGAAAAA TGGCGCAC ATT GTGCGCCA TTTTTTTGTGCCCAG TERM 2915 2691555 - 2691573 + F 100 -14.6 -5.60993 | opp_overlap 2691555 TTCCTGAATGAAAAA TGGCGCAC ATT GTGCGCCA TTTTTTTGTGCCCAG TERM 2916 2691611 - 2691593 - f 100 -16 -4.36914 | opp_overlap 2691593 TTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC TERM 2917 2691593 - 2691611 + F 100 -16 -3.07307 | opp_overlap 2691593 TTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC tnp 2691724 - 2692182 + | transposase for the IS1541 insertion element TERM 2918 2692260 - 2692284 + F 100 -9.9 -4.44046 | opp_overlap 2692263, overlap 2692262 2692263 ATAGGCGCATATGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTTGCCCTACG TERM 2919 2692262 - 2692282 + F 100 -12.5 -3.82628 | opp_overlap 2692263, overlap 2692260 2692263 AGGCGCATATGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTTGCCCTA TERM 2920 2692281 - 2692263 - f 100 -16 -4.8048 | opp_overlap 2692262 2692260 2692263 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTGCCCT TERM 2921 2692263 - 2692281 + F 100 -16 -2.88854 | opp_overlap 2692263, overlap 2692262 2692260 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTGCCCT TERM 2922 2692598 - 2692554 - f 90 -11.6 -3.66556 | gap 1, opp_overlap 2692546 2692541, overlap 2692555 AAGCGCGGAATACAA TTCTG-GCTTTACCACGATGG ATCT CCACCACGGTAAAGCACAGAC AAGTGATTAGTTATT TERM 2923 2692597 - 2692555 - f 100 -15.1 -2.79452 | gap 1, opp_overlap 2692546 2692541, overlap 2692554 AGCGCGGAATACAAT TCTG-GCTTTACCACGATGG ATCT CCACCACGGTAAAGCACAGA CAAGTGATTAGTTAT TERM 2924 2692742 - 2692760 + F 100 -13.2 -4.01078 | CCAGGGGGTAATCTG CTCTCCTG ATT CAGGAGAG TTTATGGTCACTTTT y1093 2692764 - 2693786 + | transposase for insertion sequence IS100 TERM 2925 2693867 - 2693853 - g 77 -11.4 -3.3506 | overlap 2693844 TGGAAAGCCTTATAA GCGCAG CGC CTGCGC TGTCACAACAGGCAG YPO2397 2693783 - 2694565 + | transposase/IS protein YPO2399 2696321 - 2695899 - | cysteine desufuration protein SufE TERM 2926 2696377 - 2696353 - R 91 -6.4 -5.43553 | opp_overlap 2696353 ACGTAAAAAATAAAA GCCGACTGCT GAAAG AATAGTCGGC TTTGGTGTTGCCTGT YPO2400 2697630 - 2696410 - | selenocysteine lyase TERM 2927 2697409 - 2697398 - G 70 -4.4 -4.63218 | GCGGCGTGAATAAAA TCAG CCAC CTGA GTGCGTACGGCTTCC YPO2401 2698850 - 2697627 - | cysteine desulfurase activator complex subunit SufD sufC 2699673 - 2698927 - | cysteine desulfurase ATPase component YPO2403 2701370 - 2699859 - | cysteine desulfurase activator complex subunit SufB TERM 2928 2700015 - 2700028 + g 79 -5.3 -4.90906 | opp_overlap 2700015, overlap 2700023 CAAGCAATAGAACAG TTGGT CATC ACCAA TTTTTGATGTTGTGG TERM 2929 2700576 - 2700590 + g 74 -11.4 -3.1355 | ATAGCTGTCGCGCAC GGGTGC CGA GCACCC TTCGATATAGCTGAC sufA 2701756 - 2701385 - | iron-sulfur cluster assembly scaffold protein TERM 2930 2701611 - 2701599 - G 74 -6.9 -4.28977 | opp_overlap 2701598 ATAACATAGGCAAAA CCGGC ACA ACCGG ACTGTTTGACGCCGA YPO2405 2702092 - 2701934 - | hypothetical protein TERM 2931 2702361 - 2702343 - R 78 -5.3 -5.03314 | gap 1 GCTATTGGCAAAAAA TGACGACG TTAG CG-CGTCA ATACGGCGATCGTTA YPO2406 2702767 - 2702351 - | hypothetical protein YPO2407 2705945 - 2702889 - | hypothetical protein TERM 2932 2705861 - 2705871 + g 74 -6.8 -4.4078 | opp_overlap 2705870 TAGTAGCAGTATCGC CGGT AAA ACCG TTTTGCTTCAAAGCG TERM 2933 2705911 - 2705896 - G 74 -4 -5.03747 | overlap 2705898 AAAGCGTCCAAAAAA TCCAGT ACCG ACTGAA TGACACCCGGTGCCT YPO2408 2706566 - 2707669 + | putative inner membrane protein TERM 2934 2707843 - 2707853 + T 80 -2.6 -5.4505 | ATCTCATTCTACTTC TTAT TTA ATAA TTTTTTATTCAGAGG TERM 2935 2708012 - 2708031 + T 100 -9.3 -6.21477 | CTGTGTGTAGTCTTT GCCTGTC ACCTAA GACAGGC TTTTTTTTTGCTATT TERM 2936 2708185 - 2708166 - T 100 -10 -5.47399 | overlap 2708155 TTAATTGCAAAAAAA TCCGCAAC CTAA GCTGCGGA TGATGAATACCTATA ppsA 2710652 - 2708268 - | phosphoenolpyruvate synthase YPO2410 2710989 - 2711810 + | hypothetical protein TERM 2937 2712082 - 2712068 - g 74 -10 -3.50393 | GGTTATTGCAGATAA CGTGAC GGC GTCACG TAAACGAATAGAGAA aroH 2711967 - 2713013 + | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 2938 2713063 - 2713111 + T 95 -7.8 -5.00616 | gap 1, opp_overlap 2713078, overlap 2713065 2713106 ATTAAATGAATACCT TCGGGATAGGGAAAAGTTAAC GTTGTCGG GTTAACTTTT-TCTATCCCTA TTTTTTCCGAAAAAA TERM 2939 2713065 - 2713109 + T 91 -10.4 -4.13561 | gap 1, opp_overlap 2713078, overlap 2713063 2713106 TAAATGAATACCTTC GGGATAGGGAAAAGTTAAC GTTGTCGG GTTAACTTTT-TCTATCCC TATTTTTTCCGAAAA lplA 2715713 - 2714697 - | lipoate-protein ligase A nlpC 2716302 - 2715838 - | putative lipoprotein YPO2416 2716968 - 2716582 - | hypothetical protein YPO2417 2717309 - 2716965 - | hypothetical protein TERM 2940 2717115 - 2717088 - G 87 -9.9 -4.32571 | CAACACAAAATTAAA GCTGAGCATAG GATAGG CCACGCTCAGC GGGAGTTGCTGCAAT TERM 2941 2717236 - 2717188 - G 82 -13.1 -3.34895 | opp_overlap 2717205 GCTATCGCCAACCAA CGCAATGTCAGATTCAACCGCCG GGC CTGCGGTTGCTCCCAACACTGCG CAGCCTGTTTTTGAC arnT 2718970 - 2717306 - | 4-amino-4-deoxy-L-arabinose transferase TERM 2942 2718771 - 2718781 + g 86 -8.2 -4.59773 | opp_overlap 2718770 2718768 2718771 TTATTAAACCAATAC CCGG CGA CCGG TTTTTCAAAATAACG YPO2419 2719872 - 2718967 - | hypothetical protein TERM 2943 2719736 - 2719719 - G 79 -6.9 -4.7254 | opp_overlap 2719718, overlap 2719721 AGCGCGGACGAAAAA GGCGCCA TAAA TGGCGTC CCATATTATCCGGCC YPO2420 2721872 - 2719869 - | bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase TERM 2944 2721763 - 2721753 - G 91 -6.8 -5.10767 | overlap 2721745 GACCGAAGAGAAAAA GCGA TTC TCGC CAGGATTATCAGTAT pmrF 2722852 - 2721869 - | undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase TERM 2945 2722610 - 2722592 - G 82 -11 -3.76492 | opp_overlap 2722592 GCTAACCTGATTAAA TCCCGCCA TAA TGGCGGAA TGTTGACCATAATTA YPO2422 2723993 - 2722839 - | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase btuD 2725104 - 2724343 - | vitamin B12-transporter ATPase btuE 2725680 - 2725126 - | putative glutathione peroxidase btuC 2726757 - 2725750 - | vtamin B12-transporter permease TERM 2946 2726967 - 2726923 - R 75 -8.7 -3.63515 | opp_overlap 2726923 2726921 CTTTATTGCTAATAA GTCGCTAACTCTGCTTGGTCA TAG CAAACAAGTAAAGTTAGCAAC TGTTTGTTATGCTCG YPO2426 2727442 - 2726984 - | hypothetical protein TERM 2947 2727757 - 2727742 - R 100 -11.8 -5.45802 | opp_overlap 2727742 TCTTGAAAAGAAAAA GGCCGC TTGC GCGGCC TTTTATGTCGGAAAC TERM 2948 2727742 - 2727757 + r 100 -11.8 -4.52589 | opp_overlap 2727742 TCTTGAAAAGAAAAA GGCCGC TTGC GCGGCC TTTTATGTCGGAAAC ihfA 2728072 - 2727776 - | integration host factor subunit alpha pheT 2730464 - 2728077 - | phenylalanyl-tRNA synthetase subunit beta pheS 2731461 - 2730478 - | phenylalanyl-tRNA synthetase subunit alpha TERM 2949 2730603 - 2730587 - G 79 -8 -4.29176 | ATACCGAATGCAAAA CCTGAG TAAAT CTCAGG ATCGATACCGACATT TERM 2950 2731345 - 2731356 + g 78 -3.6 -5.09895 | overlap 2731334 CGATGTCATTTGAAG GGTC AAGT GGCC TTTTTTACCTAGATA TERM 2951 2731770 - 2731753 - R 100 -8.4 -6.04324 | GTAAAAAACAAAAAA GCCTCC ACGATG GGAGGC TTCGGCGCTATTTTT YPO2429a 2731862 - 2731818 - | phenylalanyl-tRNA synthetase operon leader peptide TERM 2952 2731947 - 2731929 - R 100 -10.3 -4.49756 | opp_overlap 2731924 2731929 GTGCAAAGATTAAAA GAGGGAG ACAAG CTCCCTC TTCAATTCTGACTTA TERM 2953 2731929 - 2731947 + r 78 -10.3 -3.2496 | opp_overlap 2731929, overlap 2731924 GTGCAAAGATTAAAA GAGGGAG ACAAG CTCCCTC TTCAATTCTGACTTA rplT 2732316 - 2731960 - | 50S ribosomal protein L20 rpmI 2732551 - 2732354 - | 50S ribosomal protein L35 infC 2733199 - 2732648 - | translation initiation factor IF-3 thrS 2735131 - 2733203 - | threonyl-tRNA synthetase TERM 2954 2733436 - 2733448 + g 80 -3.3 -5.32565 | CTTTTGCTCTAATAC CCGCA TCT TGCAG TTTTTTGGTTACTTG TERM 2955 2735664 - 2735682 + G 86 -3 -5.56568 | overlap 2735666 ATCAAAACTTTATGT CTGCCGTT TCG AAAGGCCG TTTTTTTGATGGTGT YPO2434 2735522 - 2735734 + | hypothetical protein TERM 2956 2736373 - 2736400 + G 100 -13.5 -5.19275 | TGGTTACTGGAACGT CGCCCTGATTG TTTATT CAATCGGGGCG TTTTATTTTCTGGCT YPO2435 2736044 - 2736421 + | hypothetical protein YPO2436 2736807 - 2736493 - | hypothetical protein marC 2737063 - 2737746 + | multiple drug resistance protein MarC YPO2438 2738530 - 2737868 - | putative membrane-bound lytic murein transglycosylase TERM 2957 2738419 - 2738430 + g 85 -3.6 -5.40072 | CTACGTTAAGAGAAT TGCC CTGT GGCG TTTTTTTCAGCCACC TERM 2958 2738513 - 2738500 - G 82 -6.7 -4.89477 | CCGCCAACAATAAAA TTGCC ATTA GGCAA CCGACTTTTGAATTC yfeA 2738739 - 2739710 + | periplasmic-binding protein yfeB 2739707 - 2740597 + | ATP-binding transport protein yfeC 2740597 - 2741481 + | chelated iron transport system membrane protein TERM 2959 2741642 - 2741659 + G 73 -5.5 -4.67755 | TTCTCATGCTGTGCT GCCAGGG ATTG TTCTGGC TTTTTGGCTCGGTAT yfeD 2741478 - 2742371 + | chelated iron transport system membrane protein YPO2443 2742439 - 2742651 + | hypothetical protein YPO2444 2742676 - 2743551 + | hypothetical protein yfeE 2744234 - 2743680 - | putative yfeABCD locus regulator TERM 2960 2744298 - 2744312 + H 76 -10 -3.36195 | overlap 2744287 2744297 2744295 ACATCCACACGTTGT GCGGTA CTT TACCGC TATGTTTGCTATTTA YPO2446 2744645 - 2745310 + | 2-deoxyglucose-6-phosphatase TERM 2961 2745433 - 2745420 - T 71 -2.3 -5.14563 | overlap 2745401 2745400 2745421 CTTTTTAGTAAAAAA GTCGC TATA GCGAT ACGGAGTGGAAAGGA TERM 2962 2745503 - 2745474 - T 93 -10.7 -4.16842 | gap 1, opp_overlap 2745473 2745470, overlap 2745475 GTCAGCGGTAATAAA GGGCGGCCAGAGTC AGT GACTC-AGCCGCCG AATATATTTTAGAGA TERM 2963 2745502 - 2745475 - T 100 -14.2 -3.09784 | gap 1, opp_overlap 2745473 2745470, overlap 2745474 TCAGCGGTAATAAAG GGCGGCCAGAGTC AGT GACTC-AGCCGCC GAATATATTTTAGAG TERM 2964 2745587 - 2745566 - T 84 -10.1 -3.74693 | TGCCACCGTATTAAA GGTGATCGC TCAG GCGGTCACC GAACTCGATAATAAA y1062 2746769 - 2745561 - | transposase for the IS285 insertion element TERM 2965 2746920 - 2746945 + H 95 -7.7 -5.06816 | gap 1, opp_overlap 2746918 2746920 TATTACCCATAAACA GGCACCAG-TAA ATA TTATCTGGTGTC TTTTTATTAACCACT solA 2747130 - 2748245 + | N-methyltryptophan oxidase YPO2449 2748512 - 2749126 + | putative LuxR-family regulatory protein TERM 2966 2749639 - 2749678 + T 100 -11.4 -4.37092 | overlap 2749640 TACCCCATTTTCGGT TCCTCAGGGCCGTAGG CCAATTAA CCAGTGGCCCTGAGGG TTTTCTAACCACCGT TERM 2967 2749640 - 2749677 + T 93 -12.7 -3.21934 | overlap 2749639 ACCCCATTTTCGGTT CCTCAGGGCCGTAGG CCAATTAA CCAGTGGCCCTGAGG GTTTTCTAACCACCG tqsA 2750756 - 2749698 - | putative transport protein YPO2451 2751972 - 2750905 - | hypothetical protein YPO2452 2752144 - 2752016 - | hypothetical protein YPO2453 2752693 - 2752331 - | hypothetical protein YPO2454 2752986 - 2752825 - | hypothetical protein YPO2455 2753721 - 2753023 - | hypothetical protein TERM 2968 2753682 - 2753665 - G 71 -5.7 -4.34866 | ACCGAAGAAGACAAA CTTTTTA CTCG TAAAAAG AGAAGGACTGCGGTC ypeI 2754119 - 2754775 + | N-acylhomoserine lactone synthase YpeI ypeR 2755505 - 2754768 - | quorum-sensing transcriptional activator YpeR TERM 2969 2754958 - 2754970 + g 81 -6.3 -5.0095 | TCATTTTCCCGAGGA GAGAA AAT TTCTC TTTTATTCTCTTTTT TERM 2970 2755606 - 2755589 - R 85 -4.2 -5.52909 | CAAGATGTAAAAAAA TGTGAT CACTGC ATCACA TTCAAATTATTGACA TERM 2971 2755851 - 2755878 + r 91 -12.1 -3.47227 | opp_overlap 2755846 GCTCTATGAACTCCG CCATCTGGGTG CATTTA CATCCAGATGG TTGTGATGCTTACCC YPO2458 2756972 - 2755992 - | putative LysR-family transcriptional regulator TERM 2972 2757414 - 2757391 - g 84 -4.6 -5.32882 | gap 1 TACCATCAGAAAAAA TCAGGATGGAC GAT GTCC-CCCTAA ATCGCTTCCATATAA TERM 2973 2757540 - 2757513 - g 82 -11.4 -3.78409 | opp_overlap 2757508 TTAATTCAACTCAAA CCCATAATGGCA CTTA CACCATTATGGG AGGGATTACTCGGAT YPO2459 2757366 - 2758724 + | putative transporter protein YPO2460 2758771 - 2759274 + | hypothetical protein TERM 2974 2760278 - 2760288 + G 72 -8.2 -3.90762 | GCGCGGGAAGCTCGC CCGC CAA GCGG TATTTTTGCCCCATA YPO2461 2759285 - 2760304 + | putative oxidoreductase TERM 2975 2760375 - 2760334 - T 71 -9.7 -2.71731 | gap 1 GTGATTCTTTAACTA TTGGCCAGTG-CAACATA AAATCAA TACGTTAACACTGGCCAA AAAGAATCAAAACCA YPO2462 2760936 - 2760382 - | hypothetical protein YPO2463 2761951 - 2760947 - | hypothetical protein TERM 2976 2761357 - 2761343 - G 76 -5.7 -4.62872 | ATCAACGGTGAAAAA GGCAA AACCG TTGCC CGCTAAACCTTGTTC TERM 2977 2761803 - 2761819 + g 84 -4.3 -5.34309 | overlap 2761804 2761805 TTCAACCGGTTGGAG ATGGTGC CCC GCACCGC TTTTTCTTTAATGAT YPO2464 2762919 - 2761969 - | hypothetical protein YPO2465 2764262 - 2762916 - | hypothetical protein YPO2466 2764554 - 2764300 - | hypothetical protein YPO2467 2767957 - 2764670 - | hypothetical protein TERM 2978 2765014 - 2764992 - G 70 -9 -3.54424 | CTGGATTGTCGGAAA GGGGTGCACC GTT GCTGCTCCCC ACTCCAGGTCGCCTG TERM 2979 2765125 - 2765137 + g 74 -7.7 -4.20454 | opp_overlap 2765124 2765125 AATCAACAAAATTAT CTCGA GGT TCGAG TTTGGTTCTTTCTTG TERM 2980 2765267 - 2765278 + g 70 -4.4 -4.67353 | TTTGCAATAAACGGG GATC GCCG GATC TTTTTGAGTCAGTGC YPO2468 2768940 - 2767954 - | hypothetical protein YPO2469 2769654 - 2769322 - | hypothetical protein TERM 2981 2770083 - 2770106 + H 74 -6.6 -4.28361 | AGGTGCCCCCCCTGC GCCCATAGCC TTTA GGCTAAGGCC TTTTAGTCAGATTGA YPO2470 2770137 - 2771384 + | hypothetical protein TERM 2982 2771937 - 2771902 - T 86 -12 -3.14132 | opp_overlap 2771895 TGGCTGGTGTACTAA TGGTGCTCTGAAATAT AAAA ATAATTCAGAGCACCG GGGCTACTATTTACA YPO2471 2773241 - 2771967 - | hypothetical protein TERM 2983 2772840 - 2772862 + g 73 -6.2 -4.59207 | opp_overlap 2772844 TGCACGCCATGTCCA CCAATTTGGC TCC GCCACACTGG TTTTATACTCTTTAT TERM 2984 2773033 - 2773016 - G 80 -3.3 -5.252 | overlap 2773017 GACGTTGATAAAAAA TTGCCGC GCGG GCGACAT CATCAATGGCGGATA YPO2472 2774395 - 2773280 - | hypothetical protein TERM 2985 2773656 - 2773673 + g 70 -8.5 -3.75332 | opp_overlap 2773659 ATACCGACGTGCACA TTATCGG CGAC CCGATAA TTTACATTAACAAGT TERM 2986 2773842 - 2773856 + g 87 -4.2 -5.52986 | overlap 2773840 CCAATATTGTTATCG CCGC CTGTCGT GCGG TTTTTTTCGTAGCCT TERM 2987 2774039 - 2774028 - G 78 -3.6 -5.14563 | TGCTTGAGTAAAAAA CCGG TATT CCAG CCCGTATCGCCAAAA TERM 2988 2774455 - 2774470 + r 76 -2.6 -5.38047 | overlap 2774452 2774456 GGGAACTCCACCCAA TCTAAT TGAT ATTAGG TTTTTTCTATAAATC YPO2473 2775456 - 2774518 - | hypothetical protein YPO2474 2776538 - 2775483 - | hypothetical protein TERM 2989 2776566 - 2776587 + r 83 -8.7 -4.16943 | opp_overlap 2776565 2776566 TATAAATAGCAATAT CGTGGTGAG TCAT TTCACCGCG TTTTCGAGTATCAAA YPO2475 2777509 - 2776685 - | sugar ABC transporter, permease protein YPO2476 2778385 - 2777510 - | sugar ABC transporter, permease protein TERM 2990 2778325 - 2778297 - G 70 -2.5 -4.90778 | gap 1, opp_overlap 2778305, overlap 2778305 GCGAGCCAAATAAAA GGATAAAACCAG AATATG CTGGTAT-ATCC CAGATAAGAGGCCGC YPO2477 2779780 - 2778494 - | putative solute-binding protein TERM 2991 2779867 - 2779893 + H 70 -3.7 -4.79451 | opp_overlap 2779867 2779868 2779870, overlap 2779862 2779870 GCGTAATTTCGATAA TGATGTGAAGT ATTTC ACATCTCATCA TTTTATGTTTAACGT YPO2478 2780052 - 2781092 + | LacI-family transcriptional regulatory protein manB 2781109 - 2782497 + | phosphomannomutase TERM 2992 2782570 - 2782537 - f 100 -14.7 -4.93177 | overlap 2782541 TAAAAACTAATAAAA TCAACCTCGCGTTCA TTAT TGAACGCGAGGGTAA ATAGCAGCATATTGT TERM 2993 2782566 - 2782541 - f 100 -17.7 -3.84772 | overlap 2782537 AACTAATAAAATCAA CCTCGCGTTCA TTAT TGAACGCGAGG GTAAATAGCAGCATA mtlK 2782597 - 2783676 + | putative mannitol transport ATP-binding protein YPO2481 2784486 - 2783941 - | hypothetical protein YPO2482 2785196 - 2784744 - | hypothetical protein YPO2483 2785700 - 2785296 - | hypothetical protein TERM 2994 2785543 - 2785567 + g 70 -2.2 -4.98255 | gap 2 TTCTCTGTACAGATT GACC-AGC-TAG TCT CTGTGCTCGGTC TTTTTCTCGTTCCGC YPO2484 2786009 - 2785842 - | hypothetical protein TERM 2995 2786167 - 2786196 + r 95 -12.9 -3.16055 | gap 1, opp_overlap 2786171 2786172, overlap 2786155 2786172 ATCTTAGAGTTTGAA GCAAGCCCCAGCCA AAT TGGCCGGG-CTTGC TTCATCACGGGTTTC TERM 2996 2786192 - 2786171 - R 71 -8.7 -3.35371 | gap 1, opp_overlap 2786167 2786155 2786172, overlap 2786172 TAGAGTTTGAAGCAA GCCCCAGCCA AAT TGGCCGGG-C TTGCTTCATCACGGG YPO2485 2786409 - 2786212 - | hypothetical protein YPO2486 2788452 - 2786419 - | hypothetical protein TERM 2997 2786458 - 2786470 + g 73 -3.3 -5.00616 | overlap 2786459 GTTAGAAATATACTT ACCTG TTT CAGGA TTTTTTACACCAAAG TERM 2998 2788515 - 2788562 + H 100 -22.4 -3.18264 | gap 1 TATCGCTAGGCCCAA TGCCGATCAGTTAAGGATC-GGT TGA ACGAGATCCTTAACTGATCGGCA TTGCTGCATAGCAGG TERM 2999 2788626 - 2788594 - H 93 -12.1 -3.58726 | opp_overlap 2788597, overlap 2788597 GTTTTCTATAGACAA TAATTATCCTCCGGC ATA GTCGGGGGATAATTA TTCAAGGTTTAGGAT TERM 3000 2788623 - 2788597 - H 83 -9.4 -3.92996 | opp_overlap 2788597, overlap 2788594 TTCTATAGACAATAA TTATCCTCCGGC ATA GTCGGGGGATAA TTATTCAAGGTTTAG TERM 3001 2788597 - 2788623 + H 100 -13.8 -3.66772 | opp_overlap 2788594 2788597 TTCTATAGACAATAA TTATCCTCCGGC ATA GTCGGGGGATAA TTATTCAAGGTTTAG TERM 3002 2788843 - 2788829 - g 100 -2.8 -5.95539 | TCCTAAACAAAAAAA TACAGC CCA ACCGTA TAAGATAGCTAATAT YPO2487 2788665 - 2789003 + | hypothetical protein YPO2488 2789367 - 2789116 - | hypothetical protein YPO2489 2790115 - 2789612 - | hypothetical protein TERM 3003 2790128 - 2790140 + r 71 -3.3 -5.02715 | overlap 2790129 CATATCCATATTATT TCACC TTC GGTGC TTTTTGGTTTGGTAT YPO2490 2797730 - 2790123 - | putative hemolysin TERM 3004 2796888 - 2796902 + g 73 -9.2 -3.69092 | CACGGTTGGCCGCGG GCTGCC ATC GGCGGC TTTGGCGTTAATGTT YPO2491 2799562 - 2797874 - | putative hemolysin activator protein YPO2492 2801179 - 2800214 - | putative dioxygenase beta subunit TERM 3005 2800553 - 2800568 + g 80 -10.4 -3.69395 | ACCGCGTTGTGTTGC CGCCGT TTTA ACGGCG TTATTCAATGATACC TERM 3006 2800956 - 2800980 + g 100 -16.5 -3.53091 | GAATGCTCACTCAGG CGCACCGCTAT TTG GTAGCGGTGCG TTTCAAAAGGAGAAT TERM 3007 2801263 - 2801239 - R 100 -14.3 -3.54951 | TACGCTATCAGAGAA GACCCACAGCG GCT CACTGTGGGCC ATAATAATAGGCTAC YPO2493 2802399 - 2801275 - | putative dioxygenase alpha subunit YPO2494 2803997 - 2802516 - | putative transporter TERM 3008 2804547 - 2804513 - R 78 -10 -3.45031 | overlap 2804508 2804515 TTCTCAAAAAGTTAA TAGGCATTCGTCCGAT TAA AACGGACGCATACCCA AACCCGCCAACGCAG TERM 3009 2804545 - 2804515 - R 78 -10.4 -3.2916 | overlap 2804513 2804508 CTCAAAAAGTTAATA GGCATTCGTCCGAT TAA AACGGACGCATACC CAAACCCGCCAACGC YPO2495 2804710 - 2804528 - | hypothetical protein TERM 3010 2804654 - 2804680 + g 78 -10.1 -3.82218 | gap 1, opp_overlap 2804642, overlap 2804648 2804653 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCTCTGCCT YPO2496 2805876 - 2804779 - | tartrate dehydrogenase YPO2497 2805967 - 2806908 + | putativeLlysR-family transcriptional regulatory protein TERM 3011 2807020 - 2807006 - f 74 -4.2 -5.08088 | AACGTGGAATAAAAA CTCAGG ACG CTTGAG AGGTAAAAATTACCC YPO2498 2807155 - 2808159 + | putative LacI-family transcriptional regulatory protein rbsC 2809284 - 2808292 - | putative sugar transport system, permease protein rbsA 2810771 - 2809281 - | putative sugar transport system, ATP-binding protein rbsB 2811728 - 2810811 - | sugar binding protein precursor gutB 2813129 - 2811903 - | putative zinc-binding dehydrogenase TERM 3012 2813015 - 2813025 + g 71 -5.4 -4.56597 | overlap 2813009 GTATGGATACAATGT TGAC GTT GTCA TTTTTGAACAAACCA TERM 3013 2813504 - 2813494 - R 86 -6.8 -4.98672 | overlap 2813487 TTCAAAAAGACAAAA CGTC GGT GACG GTGAGAAATAAAAAA YPO2503 2814380 - 2813712 - | hypothetical protein TERM 3014 2814214 - 2814227 + g 73 -5.3 -4.614 | opp_overlap 2814214, overlap 2814205 CCGTTGTGATAACAA TCATC TATA GATGA TTTTATATCCTTCAA YPO2504 2815118 - 2814576 - | hypothetical protein TERM 3015 2815315 - 2815292 - R 100 -11 -4.81083 | GGTAACCATTAAAAA CCCCCAGC AAATCACG GCTGGGGG AAGATAAAAGCACGG YPO2505 2816294 - 2815356 - | hypothetical protein TERM 3016 2816549 - 2816534 - R 100 -9 -5.82316 | opp_overlap 2816534 2816533 AGCAGGCAAAAAAAA TCCGCT CGAA AGCGGA CTTTTATCAGACACA ompX 2817134 - 2816610 - | outer membrane protein X TERM 3017 2817842 - 2817825 - g 76 -6.9 -4.57837 | ACATGTCGTTAAAAA CGGTGCC ATTA GGCATCG CTGTAGCACTGGAAT TERM 3018 2818179 - 2818190 + G 73 -5.8 -4.57755 | TCTTGCCCATTGCAC TGGC CGTC GCCA TTTTGTCTACTGCAT YPO2507 2817539 - 2818426 + | threonine and homoserine efflux system YPO2508 2818442 - 2818939 + | hypothetical protein TERM 3019 2819580 - 2819590 + G 70 -8.2 -3.65991 | overlap 2819579 TGGCTGCGGGCAACG GGGC TAC GCCC TTATCTTGCCCCCCT tam 2818962 - 2819738 + | trans-aconitate 2-methyltransferase dps 2819995 - 2820498 + | DNA starvation/stationary phase protection protein Dps TERM 3020 2820533 - 2820549 + F 76 -10.8 -2.71364 | opp_overlap 2820533 CTATTACGCTGAACA GGGCCG TTAAC CGGCCC TGCTTGCCGCCCTCC TERM 3021 2820549 - 2820533 - f 79 -10.8 -3.04792 | opp_overlap 2820533 CTATTACGCTGAACA GGGCCG TTAAC CGGCCC TGCTTGCCGCCCTCC TERM 3022 2821443 - 2821413 - g 78 -13.4 -2.65354 | opp_overlap 2821410, overlap 2821410 2821409 2821418 CGCAGTTGAAAGCGA CCCAAGGCGAAAAT GCG ATTGTCACCTTGGG CTATGCGTTAAATCC YPO2511 2820818 - 2821945 + | hypothetical protein glnH 2822515 - 2823258 + | glutamine ABC transporter periplasmic protein glnP 2823293 - 2823949 + | glutamine ABC transporter permease protein TERM 3023 2824268 - 2824258 - g 79 -6.8 -4.63218 | overlap 2824259 TTTGGCCCAACAAAA GTGC GTG GCAC ATCCAAGGAAGAGGC glnQ 2823946 - 2824668 + | glutamine ABC transporter ATP-binding protein TERM 3024 2824775 - 2824747 - T 95 -13.2 -3.05997 | opp_overlap 2824747, overlap 2824742 TGGCTAGAAATCACA CTGGCGGACATC TTACT GATACCCGCCAG TTTTTTATAGGCTAT TERM 3025 2824747 - 2824775 + T 100 -8.8 -5.26918 | opp_overlap 2824742 2824747 TGGCTAGAAATCACA CTGGCGGACATC TTACT GATACCCGCCAG TTTTTTATAGGCTAT YPO2515 2826155 - 2824908 - | putative chemotactic transducer TERM 3026 2825068 - 2825080 + g 71 -6.3 -4.39989 | overlap 2825059 ATCGCGGCGGTAACC CCATT CTG AATGG TTTTAGTCATTTGCT TERM 3027 2826243 - 2826261 + H 100 -13.2 -4.01078 | CCAGGGGGTAATCTG CTCTCCTG ATT CAGGAGAG TTTATGGTCACTTTT y1093 2826265 - 2827287 + | transposase for insertion sequence IS100 TERM 3028 2827368 - 2827354 - g 77 -11.4 -3.3506 | overlap 2827345 TGGAAAGCCTTATAA GCGCAG CGC CTGCGC TGTCACAACAGGCAG YPO2517 2827284 - 2828066 + | transposase/IS protein TERM 3029 2828331 - 2828305 - T 72 -10.1 -2.88849 | gap 1, opp_overlap 2828313, overlap 2828304 2828320 2828321 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGAA TGGCGCGGTTCG AGCCTACATGGATGT YPO2519 2829938 - 2828928 - | putative SAM-dependent methyltransferase TERM 3030 2829845 - 2829859 + g 91 -4.2 -5.63517 | overlap 2829847 AGCAATGACGATTTC GGGGAT GCA ATCCGC TTTTTTCTTTGGGGA YPO2521 2830226 - 2830486 + | hypothetical protein TERM 3031 2830652 - 2830630 - T 100 -9.1 -4.78848 | CTTGGAAATACAAAA GCCCATCCG TTCAT CTGATGGGC TCAGACTGCTGACAA TERM 3032 2830741 - 2830715 - T 84 -10.1 -3.82218 | gap 1, opp_overlap 2830724, overlap 2830716 2830731 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 3033 2830742 - 2830716 - T 72 -10.1 -2.88849 | gap 1, opp_overlap 2830724, overlap 2830715 2830731 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT TERM 3034 2830820 - 2830842 + T 100 -9.1 -4.93296 | TTGTCAATAACCTCA GCCCATCCG TTCAT CTGATGGGC TTTTTCTGGTGGTGA ybiB 2831827 - 2830868 - | hypothetical protein menE 2833308 - 2831893 - | O-succinylbenzoic acid--CoA ligase TERM 3035 2832152 - 2832140 - G 73 -3.3 -4.93661 | ACAGGAATAACAAAA GCGTG CTG CACCC CTGAATACTGCAATA menC 2834267 - 2833296 - | O-succinylbenzoate synthase menB 2835124 - 2834267 - | naphthoate synthase TERM 3036 2834564 - 2834587 + g 78 -2.3 -5.24129 | GGCATCATATTGGCG GCACAGGAA CCAAAT TTCCCGCGC TTTTTTCTGGCCGAC YPO2526 2835956 - 2835138 - | acyl-CoA thioester hydrolase YfbB TERM 3037 2835201 - 2835186 - G 72 -4 -4.84359 | gap 1, overlap 2835188 TGACTGTGACAAAAA TGC-CAG CAC CTGTGCA GCAAAAGCACCGGGA menD 2837656 - 2835953 - | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase menF 2839251 - 2837884 - | menaquinone-specific isochorismate synthase TERM 3038 2838029 - 2838063 + g 70 -9.2 -3.6502 | TGCTGCCCATCGACT CGCGCTGAACGCAGGG CCA CACTGAATTCAGTGCG TTTAAGTGACAAATA YPO2530 2840423 - 2839779 - | hypothetical protein elaB 2841286 - 2840978 - | hypothetical protein YPO2532 2842146 - 2841934 - | hypothetical protein edd 2844089 - 2842212 - | phosphogluconate dehydratase TERM 3039 2842707 - 2842723 + g 71 -5.7 -4.4078 | AATAACCTGATGCTC CCGTGGC ACT GCCGAGG TTTTCATTACCGCCC TERM 3040 2842798 - 2842786 - G 73 -3.3 -4.91109 | CCCTGAGCAGAAAAA GGCTG TTC CAGAC TGGCGATCACCGTCG YPO2534 2844608 - 2844093 - | hypothetical protein YPO2535 2845969 - 2844638 - | putative sugar transporter TERM 3041 2845131 - 2845093 - G 89 -10.3 -4.40333 | gap 1, overlap 2845095 2845123 CGGAAATAACATAAA TACCGGCGGTGGTAGCCA CAAA TGGCAAC-ACCGCCAGAA TACCGACGGATGCCA TERM 3042 2845129 - 2845095 - G 85 -12.9 -3.79177 | gap 1, overlap 2845093 2845123 GAAATAACATAAATA CCGGCGGTGGTAGCCA CAAA TGGCAAC-ACCGCCAG AATACCGACGGATGC TERM 3043 2846241 - 2846270 + r 76 -10.8 -2.50195 | overlap 2846240 2846238 ATAATTTTCGATTGA CGCGTCAGATAA ACTTTA TTTTCTGACGCG CTATTACTCATGGAT TERM 3044 2846307 - 2846294 - R 70 -5.3 -4.50058 | CATGGATAACTAAAA TCACT AAAG AGTGA TTGAGGTTATTGACA TERM 3045 2846386 - 2846412 + r 72 -10.1 -2.88849 | gap 1, opp_overlap 2846375, overlap 2846381 2846387 ACATCCATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCTCTGCC TERM 3046 2846387 - 2846413 + r 84 -10.1 -3.82218 | gap 1, opp_overlap 2846375, overlap 2846381 2846386 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCTCTGCCT YPO2536 2847450 - 2846500 - | putative D-isomer specific 2-hydroxyacid dehydrogenase family protein TERM 3047 2847686 - 2847669 - R 80 -2.7 -5.44721 | overlap 2847672 ACCATGTTAAAAAAA CATGTTA CCGG TAACGTG ACCAGCTTATCATTA TERM 3048 2847912 - 2847884 - R 73 -5.3 -4.72272 | opp_overlap 2847889, overlap 2847889 CGTGGTGATGAAAAA TAACAGGAAACCG AAT CGACTTCCCTTTA GTCTCAGATAGTCCC TERM 3049 2847907 - 2847889 - R 70 -7.4 -3.84027 | opp_overlap 2847889, overlap 2847884 TGATGAAAAATAACA GGAAACCG AAT CGACTTCC CTTTAGTCTCAGATA YPO2537 2848908 - 2847916 - | putative LacI-family transcriptional regulatory protein TERM 3050 2849044 - 2849063 + H 80 -10.6 -3.5511 | overlap 2849043 CGGCAGTTACACCGT CGGGAGGG GATG CCCGCCCG TATTTCTCAATGGCA YPO2538 2849377 - 2850660 + | putative lipoprotein TERM 3051 2851305 - 2851279 - f 84 -10.1 -3.82218 | gap 1, opp_overlap 2851288, overlap 2851280 2851295 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 3052 2851306 - 2851280 - f 72 -10.1 -2.88849 | gap 1, opp_overlap 2851288, overlap 2851279 2851295 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT idnO 2851419 - 2852183 + | gluconate 5-dehydrogenase TERM 3053 2852380 - 2852368 - g 100 -9.1 -5.1615 | overlap 2852370 CCAATATCCAAAAAA TGGCC GCC GGCCA GCCACTGAACGATCA gntV 2852232 - 2852768 + | putative thermosensitive gluconokinase YPO2541 2852846 - 2853313 + | hypothetical protein YPO2542 2854841 - 2853651 - | hypothetical protein TERM 3054 2855030 - 2855003 - R 100 -14.2 -5.23292 | opp_overlap 2854998 CCAGATAAAACAAAA CCCCCTGTAAGC CGAT ACTCACAGGGGG TAGGGTCTATCTCGA nuoN 2856540 - 2855077 - | NADH dehydrogenase subunit N nuoM 2858079 - 2856547 - | NADH dehydrogenase subunit M TERM 3055 2857871 - 2857859 - G 70 -9.1 -3.61536 | AATCTAATGCCGAAA CGTGG GAT CCACG GCACATTATAATATG nuoL 2859963 - 2858119 - | NADH dehydrogenase subunit L TERM 3056 2859019 - 2858998 - G 72 -8.1 -3.87815 | gap 1 GCCCAGCGCCAGAAA CATGTAGCCA ATC TGGCT-CATG GTGGAGTACGCCAAC nuoK 2860262 - 2859960 - | NADH dehydrogenase subunit K nuoJ 2860804 - 2860259 - | NADH dehydrogenase subunit J nuoI 2861359 - 2860817 - | NADH dehydrogenase subunit I nuoH 2862351 - 2861374 - | NADH dehydrogenase subunit H nuoG 2865092 - 2862348 - | NADH dehydrogenase subunit G TERM 3057 2863216 - 2863206 - G 70 -8.2 -3.67173 | opp_overlap 2863199, overlap 2863196 ATAAACCTGGAAGAA GCGC TGT GCGC GGCCTTCCTGATTGA nuoF 2866564 - 2865179 - | NADH dehydrogenase I subunit F TERM 3058 2866435 - 2866445 + g 86 -8.2 -4.7373 | ACGCTTTTTCTGCCC CGGC ATA GCCG TTTTTGCTGCGATAC nuoE 2867079 - 2866561 - | NADH dehydrogenase subunit E nuoD 2868923 - 2867127 - | bifunctional NADH:ubiquinone oxidoreductase subunit C/D TERM 3059 2868826 - 2868816 - G 79 -8.2 -4.30719 | TGCTTGCACAACAAA GGCC TCT GGCC CAAAACGGTTCGACA nuoB 2869741 - 2869064 - | NADH dehydrogenase subunit B nuoA 2870337 - 2869843 - | NADH dehydrogenase subunit A TERM 3060 2870525 - 2870504 - R 74 -10.3 -2.57211 | overlap 2870503 ACTCCTTTCGATAAC CTTTTGTCA ACTT TGACAAAAG TAACTACACATTAAT TERM 3061 2870669 - 2870681 + r 70 -7.7 -3.65522 | ACTATACCATTGTCT CAGGA ATA TCCTG TTCTTCCACTCAGTA TERM 3062 2870682 - 2870706 + r 78 -2.2 -5.52384 | gap 1, overlap 2870684 CTCAGGAATATCCTG TTCT-TCCACT CAGT AGTGGACAGTA TTTTTTTGATCCAGG hexA 2871953 - 2871021 - | LysR-family transcriptional regulatory protein YPO2557 2872676 - 2872404 - | hypothetical protein TERM 3063 2873683 - 2873671 - g 80 -10.5 -3.6608 | overlap 2873649 AGCATGCGATTCAAA CCGCC TTG GGCGG CTATCAGAGCATTAG aat 2872809 - 2874023 + | aminotransferase AlaT YPO2559 2874174 - 2874767 + | hypothetical protein TERM 3064 2874770 - 2874797 + T 100 -15.8 -3.28924 | TTCACTGGATTGATC TTTATAGCCTGC TTGT GCAGGCTATAAA TTATGACAAGAGATA YPO2560 2875083 - 2874814 - | hypothetical protein TERM 3065 2874977 - 2874967 - G 71 -6.8 -4.15222 | ATTTTCGGCAAGAAA CTGC TCA GCAG TCATCGCATGAACAT YPO2561 2876942 - 2875110 - | putative ion transport protein TERM 3066 2877170 - 2877154 - R 100 -9.4 -5.42131 | opp_overlap 2877153 TAACGATACAAAAAA GGTGCC GTCGA GGCACC CTACTATTGGCTTAT YPO2562 2877890 - 2877234 - | putative phosphatase YPO2563 2878549 - 2878055 - | hypothetical protein YPO2564 2879312 - 2878857 - | hypothetical protein TERM 3067 2879198 - 2879179 - G 76 -7.8 -4.37534 | opp_overlap 2879178 2879179 AAACGGATACCAAAA CGGGTCAC TACC GTGACACG ATTCTCGGGGAACAC YPO2565 2879553 - 2879744 + | hypothetical protein ackA 2879734 - 2880936 + | acetate kinase TERM 3068 2881225 - 2881194 - g 72 -3.7 -4.7497 | overlap 2881196 TCCATGGAGCAAAAA GGGGTAAGCTTGA GCGTAT TCAAGCCTATCGC CCAGCCACGTGCGGG pta 2881104 - 2883257 + | phosphate acetyltransferase TERM 3069 2883349 - 2883375 + T 72 -10.1 -2.84602 | gap 1, opp_overlap 2883338, overlap 2883344 2883350 ACATCCATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCCCTGCC TERM 3070 2883350 - 2883376 + T 84 -10.1 -3.74872 | gap 1, opp_overlap 2883338, overlap 2883344 2883349 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCCCTGCCT TERM 3071 2883435 - 2883466 + T 79 -10.9 -3.05463 | opp_overlap 2883441, overlap 2883441 GGGTTTGTCAGCAGT CTGAAACGCCAGC CTCTGC GCTGGCGTTTTTG TTACATCAGACACGT TERM 3072 2883441 - 2883460 + T 100 -10.7 -5.10461 | opp_overlap 2883441, overlap 2883435 GTCAGCAGTCTGAAA CGCCAGC CTCTGC GCTGGCG TTTTTGTTACATCAG TERM 3073 2883460 - 2883441 - T 84 -10.7 -3.58343 | opp_overlap 2883441 2883435 GTCAGCAGTCTGAAA CGCCAGC CTCTGC GCTGGCG TTTTTGTTACATCAG TERM 3074 2883500 - 2883486 - T 75 -7.1 -4.26589 | opp_overlap 2883485 2883493 ATCAGACACGTAAAA CAGGG AGCCG CCCTG CATTCTGGGGCGGTT TERM 3075 2883493 - 2883513 + T 87 -8.2 -4.50358 | opp_overlap 2883486, overlap 2883485 ACGTAAAACAGGGAG CCGCCCTG CATTC TGGGGCGG TTTTCCTCTTTAGGT YPO2568 2884557 - 2883523 - | LacI-family transcriptional regulatory protein TERM 3076 2883882 - 2883901 + g 81 -6.4 -4.93296 | overlap 2883876 TGGCCGCATCGGGCG TGGTGACC GTTT GGTCAGCA TTTTTGTAATGCTCG TERM 3077 2884833 - 2884799 - H 100 -15.2 -3.9712 | opp_overlap 2884823, overlap 2884817 2884818 TCATGGCATGACAAA TGATAGCGCTATCACA AAT TTTGATAGCGCTACCA GATAGCGCTATCAAT TERM 3078 2884849 - 2884817 - H 77 -8.5 -3.96624 | opp_overlap 2884823, overlap 2884799 2884818 TAGCGCTATCACAAA TTTTGATAGCGCTAC CAG ATAGCGCTATCAATT GAGATCCAGATCACA TERM 3079 2884848 - 2884818 - H 86 -12 -2.97653 | opp_overlap 2884823, overlap 2884799 2884817 AGCGCTATCACAAAT TTTGATAGCGCTAC CAG ATAGCGCTATCAAT TGAGATCCAGATCAC TERM 3080 2884823 - 2884843 + H 70 -9.8 -2.53876 | opp_overlap 2884799 2884818 2884817 TATCACAAATTTTGA TAGCGCTA CCAGA TAGCGCTA TCAATTGAGATCCAG YPO2569 2884924 - 2885367 + | phosphotransferase enzyme II, A component TERM 3081 2885838 - 2885817 - T 84 -10.1 -3.74693 | TGCCACCGTATTAAA GGTGATCGC TCAG GCGGTCACC GAACTCGATAATAAA y1062 2887020 - 2885812 - | transposase for the IS285 insertion element TERM 3082 2887951 - 2887981 + r 83 -9 -4.23434 | gap 1, overlap 2887955 2887956 GTTACGGCTGAAATC CGATAGCGCCCCG GCGATG CGGGGCGC-GTTG TTTTCAGCTATTTTG TERM 3083 2887955 - 2887978 + r 93 -10.9 -4.2142 | overlap 2887951 2887956 CGGCTGAAATCCGAT AGCGCCCCG GCGATG CGGGGCGCG TTGTTTTCAGCTATT TERM 3084 2887956 - 2887977 + r 100 -14.4 -3.11767 | overlap 2887955 2887951 GGCTGAAATCCGATA GCGCCCCG GCGATG CGGGGCGC GTTGTTTTCAGCTAT YPO2573 2894003 - 2887989 - | hypothetical protein TERM 3085 2891892 - 2891909 + g 71 -5.5 -4.56597 | opp_overlap 2891895, overlap 2891891 GGCTCGGGTGGGCAG GAAGGAG ACAT CCCCTTC TTTTTCCACCAGGAA TERM 3086 2892728 - 2892746 + g 79 -11 -3.61894 | CGGCCTCATTGAGGG TCAGCGCC AGC GGCGTTGA TTGTTGCAGCAGATT TERM 3087 2894319 - 2894341 + r 77 -10.6 -3.14344 | GCTATGGCAGAGTCA TGCCCTGAGA GCG TTTCAGGGCG TTGGTACAGCAAGTA YPO2574 2894928 - 2894374 - | hypothetical protein YPO2576 2896471 - 2895617 - | hypothetical protein YPO2577 2896777 - 2898303 + | putative aldehyde dehydrogenase TERM 3088 2899159 - 2899177 + G 70 -11 -2.5655 | overlap 2899158 GCTGCCAAGTGATCA TCCCCTCA ACT TGGGGGGA ATTGGTGTCACTGGC TERM 3089 2899415 - 2899439 + G 76 -12.9 -2.70932 | overlap 2899417 GAAGGGCTGGCAGGT TATCGCACTGC TTG GCAGGGCGATA TCATTGAGGCCAAAG TERM 3090 2899417 - 2899437 + G 73 -11.1 -2.90075 | overlap 2899415 AGGGCTGGCAGGTTA TCGCACTGC TTG GCAGGGCGA TATCATTGAGGCCAA YPO2578 2898317 - 2900263 + | putative thiamine pyrophosphate-dependent protein TERM 3091 2901891 - 2901906 + G 70 -3.2 -4.84311 | gap 1, opp_overlap 2901884, overlap 2901891 TGGAAAATGCCATCA CCC-GTG GCG CGCAGGG TTTTATTGTCTCGCC YPO2581 2901668 - 2902597 + | putative sugar-binding periplasmic protein YPO2582 2902646 - 2904193 + | sugar transport ATP-binding protein TERM 3092 2904284 - 2904295 + G 74 -2.2 -5.1244 | overlap 2904277 CTTTTTTTGAACGCT TCGG CGTC CTGA TTTTTATGTTCCTGC YPO2583 2904205 - 2905233 + | sugar transport system permease protein YPO2584 2905257 - 2906390 + | hypothetical protein TERM 3093 2906764 - 2906751 - g 74 -3.7 -5.05601 | GACCACAGATAAAAA GCGGC TCAC GGCGC TGGTACTCCTGAGTA YPO2585 2906422 - 2908392 + | putative carbohydrate kinase TERM 3094 2909259 - 2909248 - g 71 -5.8 -4.31329 | TCAAAAACCGTAAAA CCAG TTTT CTGG ACGCGGTGTTGAGTG YPO2586 2908545 - 2909465 + | hypothetical protein TERM 3095 2909605 - 2909629 + G 70 -9.9 -3.1944 | opp_overlap 2909588, overlap 2909598 AAGGGCAGCCACTGA CGCTCACCGCG GTT CCCGATGAGCG TTGCCTGGTTTTGAT YPO2587 2909475 - 2910290 + | hypothetical protein TERM 3096 2910363 - 2910374 + F 75 -3 -5.24551 | opp_overlap 2910363 TTCATTGTAAATAAC CAAA TTTC TTTG TTTTTATTCGTTTGA TERM 3097 2911212 - 2911234 + G 70 -10.6 -2.94695 | overlap 2911214 2911216 GTTTGCGGTTTCACC TAGAGCGCCA GAC TGGCGGTCTA TCATTATCTATTGAG YPO2588 2910755 - 2912650 + | putative ABC transport protein YPO2589 2912953 - 2912666 - | hypothetical protein YPO2590 2913396 - 2913590 + | hypothetical protein YPO2591 2913790 - 2913608 - | hypothetical protein YPO2592 2914937 - 2913972 - | hypothetical protein TERM 3098 2915469 - 2915445 - g 91 -2.9 -5.78622 | overlap 2915447 CTATCGTAAAAAAAA TCTTCACATCC TTA GGATTTAAAAA AGAGATTAAATTCTA TERM 3099 2915569 - 2915590 + G 81 -5.7 -5.05505 | opp_overlap 2915559 2915569, overlap 2915574 CAAACGTCTGGATAA GACCCCCGC AGAA GCGGATGTC TTTTTGATTTGTGAT YPO2593 2915360 - 2915977 + | putative LuxR-family regulatory proteins YPO2594 2916668 - 2916297 - | hypothetical protein cspE 2917054 - 2917263 + | cold shock protein CspE TERM 3100 2917301 - 2917284 - T 100 -9.8 -4.61231 | opp_overlap 2917284 CCATATCTTTAAAAA CCCGCC TTACTG GGCGGG TTTTTTATGGGTAGC TERM 3101 2917284 - 2917301 + T 100 -10.5 -5.28176 | opp_overlap 2917284 CCATATCTTTAAAAA CCCGCCT TACT GGGCGGG TTTTTTATGGGTAGC crcB 2918069 - 2917686 - | hypothetical protein tatE 2918636 - 2918893 + | twin arginine translocase protein A TERM 3102 2918982 - 2919002 + T 100 -9.7 -5.1675 | opp_overlap 2918982 GGCTGATAAAAAAAA CGGATCTCC AAT GGAAATCCG TTTTTTGGTGGCTGC TERM 3103 2919002 - 2918982 - T 100 -11.9 -5.93809 | opp_overlap 2918982 GGCTGATAAAAAAAA CGGATCTCC AAT GGAAATCCG TTTTTTGGTGGCTGC TERM 3104 2919040 - 2919058 + T 74 -9.6 -3.38046 | opp_overlap 2919040, overlap 2919038 2919041 2919045 AGGTGTAATAAGTTA TTTCAGCC ATG GGCTGAAG TCTTTAGCCTACCGC TERM 3105 2919041 - 2919057 + T 76 -10.9 -2.62613 | opp_overlap 2919040, overlap 2919040 2919038 2919045 GGTGTAATAAGTTAT TTCAGCC ATG GGCTGAA GTCTTTAGCCTACCG lipA 2920039 - 2919074 - | lipoyl synthase TERM 3106 2920066 - 2920078 + r 80 -6.3 -4.90013 | TTCCAGTTCTGAATC TCTCA ACT TGAGA TTTTTCATTAAATTC lipB 2920921 - 2920232 - | lipoyltransferase YPO2600 2921408 - 2921145 - | hypothetical protein TERM 3107 2921502 - 2921473 - R 72 -6.3 -4.3739 | opp_overlap 2921474, overlap 2921479 TATCCGGCTATAAAA TCACAACTCCCGC CGGA GCGGGAGTGACGT ACTGTTCGCCAGATA TERM 3108 2921496 - 2921479 - R 100 -12.7 -3.72405 | opp_overlap 2921474, overlap 2921473 GCTATAAAATCACAA CTCCCGC CGGA GCGGGAG TGACGTACTGTTCGC dacA 2922808 - 2921606 - | D-alanyl-D-alanine carboxypeptidase fraction A TERM 3109 2923130 - 2923167 + r 100 -14.3 -5.14163 | opp_overlap 2923124 2923127 2923141 TCACCCAAACAGTTT TAACCGTAACACCCTGT TTGC ACAGGCGGTTACGGTTA TTTTTATTAGTCAGT rlpA 2924293 - 2923211 - | rare lipoprotein A rodA 2925415 - 2924303 - | cell wall shape-determining protein TERM 3110 2924915 - 2924905 - G 70 -8.2 -3.76767 | overlap 2924903 2924906 GGAACAACACAAACA GGCC GGA GGCC GCAACCAGAATTGAT pbpA 2927495 - 2925600 - | penicillin-binding protein 2 TERM 3111 2925797 - 2925774 - G 73 -8.9 -3.78022 | CTCATAGGGAGCAAA CGCAACCAT TAACTT ATGGTCGCG CAGGTGTTCTGCCAC TERM 3112 2926420 - 2926446 + g 72 -3.6 -4.77036 | GAACCGGGCAGTTGC CACCAACCAG GATCGAA CAGGCTGGTG TTTTTGGTGATAACC TERM 3113 2927116 - 2927129 + g 86 -8.1 -4.62471 | GAGGTAAAGCGACGT GAGCG TTTG CGCTC TTTTTCAAAGTTAGC YPO2605 2928047 - 2927577 - | SPOUT methyltransferase superfamily protein YPO2606 2928368 - 2928051 - | hypothetical protein nadD 2929254 - 2928592 - | nicotinic acid mononucleotide adenylyltransferase holA 2930278 - 2929244 - | DNA polymerase III subunit delta TERM 3114 2930250 - 2930223 - G 77 -9 -3.98649 | opp_overlap 2930220, overlap 2930224 CACAATAGATAACAA GCGCGTAGCCCC TCAT GGAGCTGCGCGA CAAGTTGTTCAGGGT TERM 3115 2930249 - 2930224 - G 78 -12.5 -2.98105 | opp_overlap 2930220, overlap 2930223 ACAATAGATAACAAG CGCGTAGCCCC TCAT GGAGCTGCGCG ACAAGTTGTTCAGGG rlpB 2930898 - 2930275 - | LPS-assembly lipoprotein RplB TERM 3116 2930871 - 2930837 - G 71 -6.3 -4.34402 | CCCCGCAGATTAAAA CCGCAGCCAGCGGTG ACCAG CACCGCCAACCCCAG CAACAACGTCAGAAT leuS 2933495 - 2930913 - | leucyl-tRNA synthetase TERM 3117 2931570 - 2931587 + g 70 -3.4 -4.85599 | opp_overlap 2931569 CATCATAAACAGACG TACGGT ATCCGC GCCGTA TTTTTCTACCATGAC YPO2611 2933756 - 2934238 + | hypothetical protein TERM 3118 2934367 - 2934336 - T 87 -5 -5.49579 | overlap 2934337 2934340 TCATAAAAAATAAAA GTGACCTCCCCTAC AAAC GCAGGGGAGGAGAA CGAATTAATGCAAGA TERM 3119 2934366 - 2934337 - T 75 -8.5 -3.87307 | overlap 2934336 2934340 CATAAAAAATAAAAG TGACCTCCCCTAC AAAC GCAGGGGAGGAGA ACGAATTAATGCAAG TERM 3120 2934363 - 2934340 - T 100 -14.6 -2.95933 | overlap 2934337 2934336 AAAAAATAAAAGTGA CCTCCCCTAC AAAC GCAGGGGAGG AGAACGAATTAATGC gltL 2935100 - 2934372 - | putative glutamate/aspartate transport ATP-binding protein gltK 2935771 - 2935097 - | putative glutamate/aspartate transport system permease gltJ 2936511 - 2935771 - | putative glutamate/aspartate transport system permease TERM 3121 2936594 - 2936620 + r 100 -15.2 -2.69468 | opp_overlap 2936594, overlap 2936591 GGGTTGACAAAAAAA TGCGGGGTGG GGAACGA CCACCCCGCA TCCTGTCTACCAATA TERM 3122 2936620 - 2936594 - R 100 -15.2 -5.60993 | opp_overlap 2936594 2936591 GGGTTGACAAAAAAA TGCGGGGTGG GGAACGA CCACCCCGCA TCCTGTCTACCAATA TERM 3123 2936654 - 2936672 + r 77 -10.2 -3.07102 | overlap 2936651 CATCATCAATCGGTA GGGCAGGT ATG ACCCGCCC TGATTATTATTGTTA glnH 2937602 - 2936685 - | glutamate and aspartate transporter subunit TERM 3124 2937146 - 2937168 + g 91 -11.4 -4.2131 | opp_overlap 2937145 2937146, overlap 2937159 CTTTACCTGCCAAAT CTTTGAAGTC TTT GACTTCAGAG TCTTTTTTGGTGAGT TERM 3125 2937159 - 2937170 + g 80 -4.4 -5.1675 | opp_overlap 2937146 2937145, overlap 2937146 ATCTTTGAAGTCTTT GACT TCAG AGTC TTTTTTGGTGAGTAA TERM 3126 2937464 - 2937480 + g 73 -5.1 -4.7416 | opp_overlap 2937467 ATTCACGGTGGCCCA CAACGAT AAC ACCGTTG TTTTTAACCTTTTGC TERM 3127 2938094 - 2938074 - R 79 -11.2 -3.11178 | GAACTAAGCGGAATA TAGCCCTG GAGTG CAGGGCTA TCAGGTATAAATAGA TERM 3128 2938148 - 2938136 - R 74 -4.1 -4.97666 | AACAGATGAGAAAAA CAGAC GTT ATCTG TGACTGGAAGCACTA lnt 2939914 - 2938367 - | apolipoprotein N-acyltransferase TERM 3129 2939879 - 2939861 - G 86 -5.9 -5.17353 | overlap 2939863 2939864 ACAGGCACCAAAAAA TAGCGCC AGTAG GGCGCGA ACCCACTGGCGTTGG TERM 3130 2939877 - 2939863 - G 76 -8.5 -4.2131 | overlap 2939861 2939864 AGGCACCAAAAAATA GCGCC AGTAG GGCGC GAACCCACTGGCGTT TERM 3131 2939890 - 2939864 - G 74 -11.6 -3.11701 | overlap 2939863 2939861 GGCACCAAAAAATAG CGCCAGTAGG GCGCGAA CCCACTGGCG TTGGAGGAATAGAGC ybeX 2940800 - 2939922 - | hypothetical protein TERM 3132 2940650 - 2940660 + g 73 -5.4 -4.64676 | overlap 2940647 CTCGGGTATCGGGAT CGAT CAG ATCG TTTTGTTCAGAATCA YPO2618 2941391 - 2940918 - | putative metalloprotease YPO2619 2942500 - 2941388 - | hypothetical protein TERM 3133 2942714 - 2942691 - R 86 -6.7 -5.07652 | opp_overlap 2942693, overlap 2942693 CCCGCTAAAATAAAA CAGGCACTG ACAATG CAGTGCCTC GTTACGCGGGCGGGA TERM 3134 2942712 - 2942693 - R 85 -9.3 -4.16397 | opp_overlap 2942693, overlap 2942691 CGCTAAAATAAAACA GGCACTG ACAATG CAGTGCC TCGTTACGCGGGCGG miaB 2944212 - 2942788 - | putative tRNA-thiotransferase TERM 3135 2944424 - 2944409 - H 70 -5.4 -4.52589 | opp_overlap 2944397, overlap 2944410 TGCGGTTAGACAAAA CCTTGC TAAT GCAAGA AGTACATTCACTTTT ubiF 2944454 - 2945635 + | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase TERM 3136 2945813 - 2945837 + F 100 -16.5 -2.73364 | overlap 2945811 TACTGCCTTTCTGCC TGAGCCCGGTA TTC TGCCGGGCTCA TCATTCCGCTGACGG TERM 3137 2946002 - 2946017 + F 73 -6 -4.51196 | opp_overlap 2946002, overlap 2945997 ATGAAAAAGCAAAAA GCCCGC CGAA GCGAGC TTTTCTAAATTTGGC TERM 3138 2946017 - 2946002 - f 100 -8.2 -5.1971 | opp_overlap 2946002 2945997 ATGAAAAAGCAAAAA GCCCGC CGAA GCGAGC TTTTCTAAATTTGGC TERM 3139 2946229 - 2946267 + F 79 -11.7 -2.53911 | opp_overlap 2946232 TGTATGGCTGGGATA CCAGGATTCGAACCTGG GAATG CCAGGATCAAAACCTGG TGCCTTACCGCTTGG TERM 3140 2946740 - 2946764 + F 79 -11.4 -2.50385 | opp_overlap 2946740, overlap 2946739 2946735 2946743 GGTGACGTAAAAAAA CAAGGCCGCC CCAGA GGCGACCTTG CTATCTATTCTCTAT TERM 3141 2946764 - 2946740 - f 100 -14.3 -5.47218 | opp_overlap 2946739 2946735 2946740 2946743 GGTGACGTAAAAAAA CAAGGCCGCCC CAG AGGCGACCTTG CTATCTATTCTCTAT YPO2622 2946762 - 2946899 + | hypothetical protein TERM 3142 2946917 - 2946934 + T 78 -9.8 -3.53189 | TTGTCAGCAGTCGGC GCGGGG GATTAA CCCCGC TTATCGTGTTCAATT asnB 2948612 - 2946948 - | asparagine synthetase B nagD 2949719 - 2948967 - | UMP phosphatase TERM 3143 2949447 - 2949461 + g 80 -4.2 -5.06451 | AACTAAAGCACCCTC GCCAAT AAC ATAGGC TTTTTTGCCATCCTG nagC 2951021 - 2949792 - | putative N-acetylglucosamine regulatory protein nagA 2952180 - 2951035 - | N-acetylglucosamine-6-phosphate deacetylase TERM 3144 2951808 - 2951818 + g 80 -2.4 -5.42862 | GGTGCAAGCCGAGCG CCTG ATG CTGG TTTTTTTGCAGATAT nagB 2953000 - 2952200 - | glucosamine-6-phosphate deaminase nagE 2953400 - 2955433 + | pts system, N-acetylglucosamine-specific IIABC component TERM 3145 2955524 - 2955547 + F 100 -15.4 -5.60993 | opp_overlap 2955524 TTTTAATCGAACCAA CGGGAAGAGA GCGA TCTCTTCCCG TTTTTTTGTGCCCAG TERM 3146 2955547 - 2955524 - f 100 -15.4 -3.4052 | opp_overlap 2955524 TTTTAATCGAACCAA CGGGAAGAGA GCGA TCTCTTCCCG TTTTTTTGTGCCCAG TERM 3147 2955567 - 2955585 + F 100 -16 -3.07307 | opp_overlap 2955567 TTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC TERM 3148 2955585 - 2955567 - f 100 -16 -4.36914 | opp_overlap 2955567 TTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC tnp 2955698 - 2956156 + | transposase for the IS1541 insertion element TERM 3149 2956226 - 2956265 + F 100 -9.4 -4.88918 | gap 1, opp_overlap 2956237, overlap 2956230 2956234 2956236 2956237 AGAGCCTTATAGGCG CATATGAAAAACCTCCGGC TAT GCCGGAGGATATTTAT-TG TTTTGTTTGCCGTAA TERM 3150 2956230 - 2956262 + F 100 -11.3 -4.54026 | opp_overlap 2956237, overlap 2956226 2956234 2956236 2956237 CCTTATAGGCGCATA TGAAAAACCTCCGGC TAT GCCGGAGGATATTTA TTGTTTTGTTTGCCG TERM 3151 2956234 - 2956258 + F 100 -9.9 -4.78266 | opp_overlap 2956237, overlap 2956230 2956226 2956236 2956237 ATAGGCGCATATGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTGTTTTGTTT TERM 3152 2956236 - 2956256 + F 100 -12.5 -3.95309 | opp_overlap 2956237, overlap 2956234 2956230 2956226 2956237 AGGCGCATATGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTGTTTTGT TERM 3153 2956255 - 2956237 - f 100 -16 -4.8048 | opp_overlap 2956236 2956234 2956230 2956226 2956237 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTGTTTTG TERM 3154 2956237 - 2956255 + F 100 -16 -2.94745 | opp_overlap 2956237, overlap 2956236 2956234 2956230 2956226 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTGTTTTG glnS 2956358 - 2958025 + | glutaminyl-tRNA synthetase TERM 3155 2958048 - 2958067 + F 100 -10.7 -5.43414 | opp_overlap 2958046 CGCTCAGATTCAATT GGCGTGG CACAGT CCACGCC TTTTTTGTCTCTGAT TERM 3156 2959107 - 2959089 - g 71 -7.4 -4.11623 | CAGCACCAAATGAAA TTGGCTTC AGT GACGCCAA AACCCGCTGGGACGA ybfM 2958731 - 2960152 + | hypothetical protein TERM 3157 2962655 - 2962685 + T 76 -10.4 -3.05844 | overlap 2962653 GAAGAGTGATAAACC CTGGCCGGGTGTAC AGG GTATCTCCGGTCAG TCTTGGAATGAAACG TERM 3158 2963255 - 2963273 + T 100 -11.7 -5.40072 | TGAGTTGATCGTATT TCCCCGG CTGGT CCGGGGA TTTTTTTGCCCGAAA fur 2964031 - 2963585 - | ferric uptake regulator TERM 3159 2964383 - 2964347 - R 71 -9.6 -3.06492 | opp_overlap 2964347 2964351, overlap 2964351 CCAGTGACTGGAACA GAAACGCTCTGC TGTGAATACTATC GCAGAGCGTTTC TTGTTGCGGGGAGAT TERM 3160 2964347 - 2964383 + r 100 -12.4 -3.61517 | opp_overlap 2964347 2964351, overlap 2964351 CCAGTGACTGGAACA GAAACGCTCTGCTGTG AATAC TATCGCAGAGCGTTTC TTGTTGCGGGGAGAT TERM 3161 2964351 - 2964379 + r 78 -7.4 -4.44667 | opp_overlap 2964347 2964351, overlap 2964347 TGACTGGAACAGAAA CGCTCTGCTGTG AATAC TATCGCAGAGCG TTTCTTGTTGCGGGG fldA 2964925 - 2964398 - | flavodoxin FldA TERM 3162 2965330 - 2965287 - R 73 -6 -4.43859 | opp_overlap 2965294 2965325, overlap 2965294 CATAACGGCATAAAA GTAATAACAGCGTGGCGTAA TCAC TTACACCACGCTGTTGTGGT AACCGACAGGGTTAG TERM 3163 2965323 - 2965294 - R 100 -17.3 -3.9978 | opp_overlap 2965294, overlap 2965287 GCATAAAAGTAATAA CAGCGTGGCGTAA TCAC TTACACCACGCTG TTGTGGTAACCGACA TERM 3164 2965294 - 2965323 + r 100 -15.1 -3.40403 | opp_overlap 2965287 2965294 GCATAAAAGTAATAA CAGCGTGGCGTAA TCAC TTACACCACGCTG TTGTGGTAACCGACA YPO2637 2965629 - 2965342 - | LexA regulated protein YPO2638 2966728 - 2965961 - | hypothetical protein TERM 3165 2967710 - 2967723 + r 78 -9.5 -3.737 | opp_overlap 2967708 2967705 TCTTGATTAACTATT GGGGC GAAC GCCCC TTTCGTAGAAGGTTG YPO2639 2968038 - 2967853 - | integrase (partial) YPO2640 2968384 - 2968121 - | IS1400 transposase A intA 2968864 - 2968433 - | phage family integrase (partial) YPO2642 2969713 - 2968931 - | transposase/IS protein TERM 3166 2969629 - 2969643 + g 77 -11.4 -3.3506 | overlap 2969642 CTGCCTGTTGTGACA GCGCAG GCG CTGCGC TTATAAGGCTTTCCA y1093 2970732 - 2969710 - | transposase for insertion sequence IS100 TERM 3167 2970754 - 2970736 - R 100 -13.2 -4.01078 | AAAAGTGACCATAAA CTCTCCTG AAT CAGGAGAG CAGATTACCCCCTGG TERM 3168 2971586 - 2971567 - R 91 -7.2 -5.28176 | overlap 2971574 2971580 2971583 GGTAGGGATAAAAAA CAGATACC CGAA AGTATCTG TCAGACTGCTGACAA TERM 3169 2971675 - 2971649 - R 84 -10.1 -3.82218 | gap 1, opp_overlap 2971658, overlap 2971650 2971665 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 3170 2971676 - 2971650 - R 72 -10.1 -2.88849 | gap 1, opp_overlap 2971658, overlap 2971649 2971665 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT proX 2972790 - 2971786 - | glycine betaine transporter periplasmic subunit TERM 3171 2971988 - 2972001 + g 80 -2.3 -5.4505 | overlap 2971975 TTGGCGGCTGCCGGA TTGGC TTCA GCCCA TTTTTTGTTCGCCAC proW 2974004 - 2972838 - | glycine betaine transporter membrane protein proV 2975196 - 2973997 - | glycine betaine/L-proline transport ATP-binding protein TERM 3172 2974265 - 2974276 + g 71 -5.8 -4.30576 | opp_overlap 2974265 CGTTCCAGCACATAA CCGT AATC ACGG TTTTCATCCTGAAGC TERM 3173 2975790 - 2975806 + r 80 -3.5 -5.37043 | GGCTAACTGCCTATT GGGGCTG AGT CTCCCCC TTTTTTATCTAGAAT nrdF 2976843 - 2975872 - | ribonucleotide-diphosphate reductase subunit beta nrdE 2979031 - 2976950 - | ribonucleotide-diphosphate reductase subunit alpha TERM 3174 2977661 - 2977648 - G 81 -5.9 -5.03314 | CCGAGCCGTAAAAAA GACGC TCCC GCGCC AGATAACCGTGCAGG nrdI 2979486 - 2979082 - | ribonucleotide reductase stimulatory protein nrdH 2979736 - 2979500 - | putative glutaredoxin TERM 3175 2980570 - 2980545 - g 90 -9 -4.63527 | gap 1, overlap 2980546 2980547 GCATCAGTTCAAAAA GC-GCCCGTGC AAAAA GCACAGGCAGC GAAAAAGCACCATAA asr 2980257 - 2980622 + | acid shock protein precursor TERM 3176 2980662 - 2980681 + F 100 -9.3 -5.63504 | opp_overlap 2980664 CAGGTTAATCCCAAT CACCCAC TTAATT GTGGGTG TTTTTTTATAAGCTT YPO2653 2981100 - 2981435 + | hypothetical protein yicN 2981982 - 2981533 - | hypothetical protein TERM 3177 2981850 - 2981868 + g 74 -2.4 -5.10933 | opp_overlap 2981850, overlap 2981851 CCATCTCTTGCAACA TCGATTCA ATA TAAATCGG TTTTATTTTCAGTAG TERM 3178 2983530 - 2983551 + G 77 -10.1 -3.74693 | TTTATTATCGAGTTC GGTGACCGC CTGA GCGATCACC TTTAATACGGTGGCA y1062 2982348 - 2983556 + | transposase for the IS285 insertion element cspB 2984316 - 2984528 + | cold shock protein TERM 3179 2984574 - 2984591 + F 100 -9.1 -6.25741 | opp_overlap 2984574 2984573 AAATAGATTTAGAAG CCTCGTC TTTT GACGGGG TTTTTTTTATTATTT TERM 3180 2985032 - 2985052 + F 72 -6.1 -4.35644 | opp_overlap 2985024 2985032 2985036, overlap 2985029 2985033 TAATAATCAAGCCAA TCAATAGCC TGG GGCTTTTGG TTCTTTTCTACTACT TERM 3181 2985448 - 2985459 + G 78 -2.2 -5.36441 | CCTTGGTGGCAACTG CGTT ATTG AGCG TTTTTTCTGTCCCAG TERM 3182 2986476 - 2986463 - g 90 -8.1 -5.05601 | CACCAGAGAGAAAAA TGGCC TACC GGCCA AGATAACGCTTTGGT YPO2660 2985405 - 2986982 + | putative solute-binding protein YPO2661 2986979 - 2987950 + | hypothetical protein TERM 3183 2988371 - 2988384 + G 70 -8.1 -3.69605 | TAGCATTAACCCACT GGCCA AAGC TGGCC TTGATTTTACGTGCC YPO2662 2987947 - 2988753 + | binding-protein-dependent transport protein YPO2663 2988753 - 2989559 + | putative transport ATPase YPO2664 2989552 - 2990217 + | putative transport ATPase ureA 2991416 - 2991718 + | urease subunit gamma ureB 2991771 - 2992205 + | urease subunit beta TERM 3184 2992909 - 2992921 + G 71 -10.5 -3.14211 | opp_overlap 2992907, overlap 2992917 GAAAGGTAATTCATA CGGGC GCG GCCCG TTGCTGGAACAGGCT ureC 2992295 - 2994013 + | urease subunit alpha ureE 2994309 - 2995004 + | urease accessory protein UreE ureF 2995026 - 2995712 + | urease accessory protein ureG 2995839 - 2996501 + | urease accessory protein TERM 3185 2996890 - 2996870 - f 74 -6.2 -4.431 | overlap 2996884 CAGTCAGCCACAAAA GTTCACAT GATGA ATGCGAAC TACGCCTCGCAGATC TERM 3186 2997527 - 2997548 + F 84 -10.1 -3.86346 | opp_overlap 2997528 2997530, overlap 2997528 2997530 GTCAGTCTATTGAAT AGAGGCTGG GTAC CCAGCCTCG TTTATCAGCCAGTGA TERM 3187 2997528 - 2997547 + F 100 -13.6 -2.91593 | opp_overlap 2997528 2997530, overlap 2997527 2997530 TCAGTCTATTGAATA GAGGCTGG GTAC CCAGCCTC GTTTATCAGCCAGTG TERM 3188 2997547 - 2997528 - f 100 -13.6 -3.09327 | opp_overlap 2997528 2997527 2997530, overlap 2997530 TCAGTCTATTGAATA GAGGCTGG GTAC CCAGCCTC GTTTATCAGCCAGTG TERM 3189 2997545 - 2997530 - f 77 -10.4 -3.10522 | opp_overlap 2997530 2997528 2997527, overlap 2997528 AGTCTATTGAATAGA GGCTGG GTAC CCAGCC TCGTTTATCAGCCAG TERM 3190 2997530 - 2997545 + F 76 -10.4 -3.00946 | opp_overlap 2997528 2997530, overlap 2997528 2997527 AGTCTATTGAATAGA GGCTGG GTAC CCAGCC TCGTTTATCAGCCAG TERM 3191 2997766 - 2997790 + G 70 -4.3 -4.72986 | opp_overlap 2997769 2997772 TCAGGTAATGTTTCA GAATAACCC ATTGACC GGGCTATTC TTTTTCATCGCAATA YPO2672 2997656 - 2998648 + | putative urea transporter TERM 3192 2998756 - 2998724 - f 73 -10 -2.93853 | gap 1, overlap 2998721 ATAGACCTCAAATTA TTGGCGTTATCG-TG TTGT CAGCGATAACGCCAG GTCAGAACGGGTAGG YPO2673 2998797 - 2999855 + | putative nickel transport protein TERM 3193 2999976 - 2999935 - T 91 -10.3 -4.20918 | opp_overlap 2999939, overlap 2999937 2999939 GGGAAGGCTAACAAA TAGAGACACTCATTAACCG ATAA CGCTTAATGAGTGTCTTTT TTTTACAGGTTACAT TERM 3194 2999974 - 2999937 - T 100 -12.9 -3.70139 | opp_overlap 2999939, overlap 2999935 2999939 GAAGGCTAACAAATA GAGACACTCATTAACCG ATAA CGCTTAATGAGTGTCTT TTTTTTACAGGTTAC TERM 3195 2999939 - 2999972 + T 100 -15.5 -5.77853 | opp_overlap 2999937 2999935 2999939 AGGCTAACAAATAGA GACACTCATTAACCG ATAA CGCTTAATGAGTGTC TTTTTTTTACAGGTT TERM 3196 2999972 - 2999939 - T 100 -15.5 -3.4214 | opp_overlap 2999939, overlap 2999937 2999935 AGGCTAACAAATAGA GACACTCATTAACCG ATAA CGCTTAATGAGTGTC TTTTTTTTACAGGTT hdeB 3000353 - 3000024 - | acid-resistance protein TERM 3197 3001875 - 3001859 - g 71 -6.5 -4.13767 | overlap 3001862 GTTGCCACGCTAAAA TTAGCCG GTG CGGCGAA GGCAAAATATATTAT YPO2675 3000971 - 3002146 + | voltage-gated potassium channel TERM 3198 3002207 - 3002186 - T 75 -7.3 -4.34402 | opp_overlap 3002186 GTGTTTATATCAAAA CACCCTC GGTTAAGT GAGGGTG TTTTTTTTGTCACGA TERM 3199 3002186 - 3002207 + T 100 -8 -5.93809 | opp_overlap 3002186 GTGTTTATATCAAAA CACCCTCG GTTAAG TGAGGGTG TTTTTTTTGTCACGA ccrB 3002648 - 3002244 - | camphor resistance protein CrcB YPO2677 3003044 - 3002664 - | hypothetical protein TERM 3200 3002757 - 3002775 + g 73 -11 -2.92668 | overlap 3002752 TGCTCTGCCTCGGGC TGTGGCCA GTT TGGCCGCA TCTAATTGCATACTG celA 3004085 - 3004402 + | N,N'-diacetylchitobiose-specific PTS system transporter subunit IIB celB 3004413 - 3005774 + | N,N'-diacetylchitobiose-specific PTS system transporter subunit IIC celC 3005941 - 3006288 + | N,N'-diacetylchitobiose-specific PTS system transporter subunit IIA TERM 3201 3006653 - 3006683 + G 86 -6.8 -4.98061 | overlap 3006656 TGTCTCGGCCTATTG TGGCCTCTCAGGCG TAT CGCTTAAGAGGTGA TTTTCTTTCCTATAT TERM 3202 3006656 - 3006680 + G 75 -10.7 -3.34291 | overlap 3006653 CTCGGCCTATTGTGG CCTCTCAGGCG TAT CGCTTAAGAGG TGATTTTCTTTCCTA celD 3006325 - 3007167 + | DNA-binding transcriptional regulator ChbR TERM 3203 3007954 - 3007965 + G 72 -3.6 -4.8143 | GCGCAACGTGGTTAT CGGC TGGG GTCG TTTTTAGATTGTTAA YPO2682 3007219 - 3007980 + | hypothetical protein YPO2683 3008163 - 3007987 - | hypothetical protein TERM 3204 3008229 - 3008200 - R 100 -15.9 -2.91065 | opp_overlap 3008205, overlap 3008191 3008202 3008205 ATCATAGACATCACA GATAATGCCCCCA TTTT TAGGGGCATTATC CTACAAGAGGCGACT TERM 3205 3008227 - 3008202 - R 93 -12.7 -3.00259 | opp_overlap 3008205, overlap 3008191 3008200 3008205 CATAGACATCACAGA TAATGCCCCCA TTTT TAGGGGCATTA TCCTACAAGAGGCGA TERM 3206 3008224 - 3008205 - R 80 -10 -3.63762 | opp_overlap 3008205, overlap 3008191 3008202 3008200 AGACATCACAGATAA TGCCCCCA TTTT TAGGGGCA TTATCCTACAAGAGG YPO2684 3008643 - 3008275 - | hypothetical protein TERM 3207 3009378 - 3009389 + G 74 -7.2 -4.27467 | opp_overlap 3009374 GCAGAACAGAGTAGG GCGG TTAA CCGC TTTATGTTGGTATTA seqA 3009138 - 3009665 + | replication initiation regulator SeqA pgm 3009738 - 3011381 + | phosphoglucomutase TERM 3208 3011459 - 3011436 - T 86 -11.8 -3.16564 | gap 1, opp_overlap 3011436 TTGGCACTCGATCAA TCCGGC-ACAG GCT CTGTTGCCGGA TTTTTTATGTGTTTT TERM 3209 3011436 - 3011459 + T 100 -11.8 -5.53079 | gap 1, opp_overlap 3011436 TTGGCACTCGATCAA TCCGGC-ACAG GCT CTGTTGCCGGA TTTTTTATGTGTTTT TERM 3210 3012060 - 3012043 - T 100 -11.3 -4.8622 | opp_overlap 3012036 3012046 TGGCGCAATTAAAAA TGACCGC TCAG GCGGTCA TCTAAGATTAATTTA YPO2687 3012553 - 3012125 - | hypothetical protein kdpE 3013277 - 3012648 - | DNA-binding transcriptional activator KdpE TERM 3211 3013545 - 3013555 + r 82 -6.8 -4.77567 | overlap 3013542 CTTCGTTATTCTGTC TGCC GCG GGCA TTTTGTTATCAACCT kdpD 3016296 - 3013570 - | sensor protein KdpD TERM 3212 3013675 - 3013661 - G 78 -3.5 -5.08255 | opp_overlap 3013668, overlap 3013666 AGTGGCAAAACAAAA CGGAA GCTGG CTCCG CCCTCTTGACGCTTC TERM 3213 3014757 - 3014783 + g 76 -8 -4.15565 | opp_overlap 3014777 TTTCATACAGATGTC TGGCCCGTTGTT CCC GATAACGGGCAA TTTTAGCCTGATAGC TERM 3214 3014947 - 3014920 - G 70 -9.8 -3.2657 | overlap 3014915 3014934 AAAAAACAGATCGAA GCTGGCGACATT AATC ACCGCCGCCAGC ACTGAAGGCCAGCGG kdpC 3016908 - 3016306 - | potassium-transporting ATPase subunit C TERM 3215 3016781 - 3016797 + g 79 -12.3 -3.25942 | TTATCGCCCAGTCGC GCCAGTG AAC CACTGGC TTGCTGTGAAAACAT TERM 3216 3016986 - 3017013 + r 71 -9.8 -2.72855 | opp_overlap 3016986 3016985, overlap 3016988 TTTGTGTCTTAAAAC CGGCCACCGCAT CAGG GTGCGATGGCTG TGGTTAAACGGTTTA kdpB 3019186 - 3017120 - | potassium-transporting ATPase subunit B TERM 3217 3017709 - 3017747 + g 70 -9.5 -3.30441 | gap 1, opp_overlap 3017707, overlap 3017710 GCCAGAAAATCATCT ACGCC-AGCTTCAGCGGC AATT GCCGCTGCGGTTAGGCGA TTGTCACCGGTGATC TERM 3218 3017710 - 3017746 + g 76 -13 -2.5805 | gap 1, opp_overlap 3017707, overlap 3017709 CCAGAAAATCATCTA CGCC-AGCTTCAGCGGC AATT GCCGCTGCGGTTAGGCG ATTGTCACCGGTGAT TERM 3219 3018433 - 3018399 - G 83 -9.2 -4.40298 | opp_overlap 3018399, overlap 3018400 AGGCAAACCAATAAA GCGACTAGCACGGTGA TGG TCACCGGGCTACCGGC TTGGCTGGCCTCCAC TERM 3220 3018431 - 3018400 - G 73 -10.2 -3.23094 | gap 1, opp_overlap 3018399, overlap 3018399 GGCAAACCAATAAAG CGACTAGCACGGTGA TGG TCACCGGGCTA-CCG GCTTGGCTGGCCTCC kdpA 3020968 - 3019280 - | potassium-transporting ATPase subunit A TERM 3221 3020059 - 3020047 - G 70 -10.5 -2.93447 | overlap 3020046 CTAACGGGGATAAAT GCGGG TTT CCCGC CAGTTCGGCGTACAT TERM 3222 3020210 - 3020194 - G 70 -2.2 -4.92783 | AAGGGATCAGAAAAA TGGCCA GCATT TGGACA AAATTACTGAATGCA TERM 3223 3020910 - 3020894 - G 82 -7.9 -4.60924 | CAAACGTGCTAAAAA CCCACCC AAC GGACGGG ACAACACGAACAACA TERM 3224 3021237 - 3021257 + H 71 -6.9 -4.12225 | opp_overlap 3021236 3021239 TTGGTTTGTGAAACT TACTTTCAC CGG GTGAATGTA TTTGGTTTGCTAATT TERM 3225 3021625 - 3021611 - g 72 -3.5 -4.84359 | GTATCTGGATAAAAA CCAGT GATAA ACCGG TTTGGCTGACCCAAT ybfA 3021463 - 3021669 + | hypothetical protein TERM 3226 3021721 - 3021745 + F 100 -12.1 -5.16237 | TACAAAAAATAGCTG GCCCGTGAGTA TCA TGCCCACGGGC TTTTTTAATGCGCTT YPO2694 3022008 - 3022490 + | hypothetical protein TERM 3227 3022905 - 3022919 + G 72 -3.5 -4.77165 | TTTTGTCAGCAACAG CAGGT CGATA GCCTG TTTTATTCTCAACAG TERM 3228 3023231 - 3023263 + G 74 -4 -4.91109 | opp_overlap 3023240, overlap 3023232 3023240 CCAGTTATTTCCTGC AGGGGAAGACGCTG CCTTA CAGCGTTTACGCCG TTTTTGTCGTGAACA phrB 3022620 - 3024083 + | deoxyribodipyrimidine photolyase YPO2696 3024080 - 3025111 + | putative 3',5'-cyclic-nucleotide phosphodiesterase YPO2697 3025234 - 3025980 + | putative hydrolase-oxidase TERM 3229 3026002 - 3026022 + F 100 -13.3 -2.9518 | overlap 3026018 GGATAGGGCTATTTT CGCCGATGT TTA GCATCGGCG TGTCTCCGTCTTACA YPO2699 3027249 - 3028199 + | hypothetical protein YPO2700 3028196 - 3028933 + | hypothetical protein TERM 3230 3029610 - 3029636 + G 74 -7.3 -4.15841 | gap 1, overlap 3029613 CGGAACCATTGCATA TCGCGCTGTGGG GGAT CCCA-ACCGCGA TTTGTGCTTTCCTGA YPO2701 3029018 - 3029749 + | hypothetical protein YPO2702 3029746 - 3030765 + | hypothetical protein pcp 3030775 - 3031422 + | pyrrolidone-carboxylate peptidase TERM 3231 3031461 - 3031434 - T 82 -10.6 -3.62597 | gap 1 CTGATCTTCCAATAA CCTCACGGCAGCC GAA GG-TGGCGTGAGG TTACAGACAACGTCC ung 3032199 - 3031513 - | uracil-DNA glycosylase TERM 3232 3032438 - 3032425 - H 73 -3.9 -5.0133 | overlap 3032429 GATGTGGTGAAAAAA TTGAT TTGA ATCAA AGAATGGTAGGGGCT YPO2705 3032552 - 3032935 + | autonomous glycyl radical cofactor GrcA TERM 3233 3032984 - 3032999 + F 100 -10.4 -5.1675 | opp_overlap 3032982 AATCATAAAGTGATA GGGGAC TTCG GTCCCC TTTTTTCATGCCTGA plaA 3033114 - 3034076 + | phospholipase A yplB 3034154 - 3034810 + | putative phospholipase A accessory protein TERM 3234 3034920 - 3034903 - T 74 -4.8 -4.78237 | opp_overlap 3034898, overlap 3034898 3034890 TATCTGACAACAAAA CCGCTA TGTGAG CAGCGG CTTTGTTGTCGTGCA srmB 3036266 - 3034941 - | ATP-dependent RNA helicase SrmB TERM 3235 3036032 - 3036047 + g 79 -5.4 -5.00616 | gap 1 GCGTCAGGATCAGGA TCCGCGG TGG CC-CGGA TTTTTTGCGGGGGAA YPO2709 3036506 - 3037264 + | hypothetical protein TERM 3236 3037339 - 3037316 - T 83 -8.9 -4.08958 | gap 1, opp_overlap 3037315 AGCGTGAAATAAGAA TC-GGGCGTC GTAGA GACGCCCTGA GGTTATTGACAAAGT TERM 3237 3037414 - 3037440 + T 72 -10.1 -2.88849 | gap 1, overlap 3037409 3037415 ACATCTATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCTCTGCC TERM 3238 3037415 - 3037441 + T 84 -10.1 -3.82218 | gap 1, overlap 3037409 3037414 CATCTATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCTCTGCCT TERM 3239 3037501 - 3037525 + T 79 -11.4 -2.56539 | overlap 3037500 3037498 GGTTTGTCAGCAGTC TGCGGGCGTC GTAGA GACGCCCTCA ATCTTATGGATTCAG nadB 3039184 - 3037547 - | L-aspartate oxidase TERM 3240 3037764 - 3037774 + g 76 -6.8 -4.46212 | ATGCGCCGTAAAGCC CGCT CTA AGCG TTTTGTGGTACGGAC TERM 3241 3039022 - 3039012 - G 70 -2.4 -4.91109 | overlap 3039014 CCCTGAGCATAAAAA GTGG CTC CCTC ATTAAGAGGCCCTTT rpoE 3039372 - 3039947 + | RNA polymerase sigma factor RpoE rseA 3039973 - 3040629 + | anti-RNA polymerase sigma factor SigE TERM 3242 3040718 - 3040685 - g 86 -13.3 -3.59979 | gap 1, opp_overlap 3040687 CCTGTTCATGGCAAA CATTGCT-TCGGCGGA ATC TACGCCGATAGCAATG TTGCAGGAAATGGGC rseB 3040629 - 3041585 + | periplasmic negative regulator of sigmaE TERM 3243 3041961 - 3041951 - g 71 -6.8 -4.26076 | TTACTGGCACGAAAA CTGG CAA CCAG AATTGAGGGGCTCAG rseC 3041582 - 3042037 + | SoxR reducing system protein RseC lepA 3042912 - 3042058 - | hypothetical protein TERM 3244 3042844 - 3042862 + g 70 -4.4 -4.64383 | opp_overlap 3042833, overlap 3042845 TATAGCTATTATTGT AGCAAGGG TAA CCCATGCA TTTTCATTTCTCATT TERM 3245 3042932 - 3042952 + H 75 -8.3 -3.80733 | CTCTCCTCGTTACCG CCAAGAGAA TAT TTCACTTGG TTATTATAAAATCAC TERM 3246 3043416 - 3043403 - H 73 -3.9 -5.01497 | ACGACTAGAGAAAAA TTCAT ATAA ATGAA GCACATAAGAAACTT lepA 3043412 - 3045211 + | GTP-binding protein LepA lepB 3045221 - 3046219 + | lsignal peptidase I rnc 3046571 - 3047251 + | ribonuclease III era 3047248 - 3048159 + | GTP-binding protein Era TERM 3247 3048323 - 3048310 - g 76 -8.1 -4.27316 | opp_overlap 3048310 CGTTCCAATTTAAAA GGCTG CTTG CAGCC TTTTACGCCGTTATT TERM 3248 3048310 - 3048323 + G 76 -8.1 -4.12599 | opp_overlap 3048310 CGTTCCAATTTAAAA GGCTG CTTG CAGCC TTTTACGCCGTTATT recO 3048169 - 3048894 + | DNA repair protein RecO TERM 3249 3048999 - 3049017 + F 100 -13.2 -4.01078 | CCAGGGGGTAATCTG CTCTCCTG ATT CAGGAGAG TTTATGGTCACTTTT y1093 3049021 - 3050043 + | transposase for insertion sequence IS100 TERM 3250 3050124 - 3050110 - g 77 -11.4 -3.3506 | overlap 3050101 TGGAAAGCCTTATAA GCGCAG CGC CTGCGC TGTCACAACAGGCAG YPO2722 3050040 - 3050822 + | transposase/IS protein YPO2723 3050889 - 3051674 + | putative OmpA family protein TERM 3251 3051882 - 3051892 + G 74 -8.2 -4.05446 | overlap 3051881 TAGGTTTTTGGTACG GCGC ACC GCGC TTTGTCATTGCCGCC TERM 3252 3052083 - 3052069 - g 73 -6.4 -4.58663 | opp_overlap 3052069 AGCATTGGCGAAAAA TCCAGC GTT ACTGGA TAACTTCATTAAGCA TERM 3253 3053447 - 3053412 - g 71 -7 -4.14739 | gap 1, opp_overlap 3053422 TGAGTTATGCCAAAA CGTCCAATGA-GCAGAT CTT ACCTGCGTTATTGAACG CGACACAGCAGTTAC TERM 3254 3054482 - 3054455 - g 79 -5.6 -5.05782 | overlap 3054461 AGCCAGGCTAAAAAA TTACAAGAAACG ATCG CGTTTCGTGAAA ATAAACTGATTAAAG TERM 3255 3054811 - 3054800 - g 70 -4.4 -4.69559 | AAATTTGAAAATAAA GTGA TTAC TCAC ACGTCCAAAGCGATT TERM 3256 3055290 - 3055276 - g 72 -10 -3.36492 | opp_overlap 3055274 GGCCCAACGCCAGAA GGCATC CGC GATGCC CGATATTCTTTTTCG YPO2724 3051683 - 3055510 + | hypothetical protein TERM 3257 3057367 - 3057380 + G 70 -8.1 -3.65351 | TGGGAACAGGCCGAG CGCGA TATG TCGCG TTTGACTAAAAATAA TERM 3258 3058215 - 3058190 - g 77 -8.9 -4.07133 | overlap 3058172 3058208 CACCGCCAGAAACAA CGGCACCGCCG GAAA CAACGGCACCG CCGGAAACAACGGCA TERM 3259 3058233 - 3058208 - g 75 -8.9 -3.9122 | overlap 3058190 3058226 CACCGCCGGAAACAA CGGCACCGCCG GAAA CAACGGCACCG CCGGAAACAACGGCA TERM 3260 3058251 - 3058226 - g 75 -8.9 -3.9122 | overlap 3058208 3058244 3058245 CACCGCCGGAAACAA CGGCACCGCCG GAAA CAACGGCACCG CCGGAAACCACGGCA TERM 3261 3058254 - 3058244 - g 72 -8.2 -3.9122 | overlap 3058226 3058245 CACCGCCGGAAACAA CGGC ACC GCCG GAAACCACGGCACCG TERM 3262 3058323 - 3058298 - g 70 -8.9 -3.59202 | overlap 3058280 3058316 CACCGCCAGAGACAA CGGCACCGCCG GAAA CAACGGCACCG CCAGAAACAACGGCA TERM 3263 3058359 - 3058334 - g 77 -8.9 -4.07133 | overlap 3058316 3058352 CACCGCCAGAAACAA CGGCACCGCCG GAAA CAACGGCACCG CCGGAAACAACGGCA TERM 3264 3058377 - 3058352 - g 75 -8.9 -3.9122 | overlap 3058334 3058370 CACCGCCGGAAACAA CGGCACCGCCG GAAA CAACGGCACCG CCGGAAACAACGGCA TERM 3265 3058395 - 3058370 - g 75 -8.9 -3.9122 | overlap 3058352 3058388 CACCGCCGGAAACAA CGGCACCGCCG GAAA CAACGGCACCG CCGGAAACAACGGCA TERM 3266 3058413 - 3058388 - g 75 -8.9 -3.9122 | overlap 3058370 3058406 CACCGCCGGAAACAA CGGCACCGCCG GAAA CAACGGCACCG CCAGAAACAACGGCA TERM 3267 3058449 - 3058424 - g 77 -8.9 -4.07133 | overlap 3058406 3058442 CACCGCCAGAAACAA CGGCACCGCCG GAAA CAACGGCACCG CCAGAAACAACGGCA TERM 3268 3058485 - 3058460 - g 77 -8.9 -4.07133 | overlap 3058442 3058478 CACCGCCAGAAACAA CGGCACCGCCG GAAA CAACGGCACCG CCAGAAACAACGGCA TERM 3269 3058524 - 3058514 - g 74 -8.2 -4.07133 | overlap 3058496 3058515 CACCGCCAGAAACAA CGGC ACC GCCG GAACCGACGCGAACA YPO2725 3055804 - 3058569 + | hypothetical protein TERM 3270 3058623 - 3058589 - f 89 -11.4 -3.44377 | opp_overlap 3058587 3058585 3058584 3058582, overlap 3058608 ATAGATAAAAGGTAA GCATGTTCTGCGTGGG AAA CACACGTAGAGCATGC GGTCTCTGATTTTTC YPO2726 3058928 - 3059776 + | hypothetical protein YPO2727 3059796 - 3060602 + | hypothetical protein TERM 3271 3060725 - 3060714 - g 89 -2.2 -5.80951 | overlap 3060707 ATGGAAAAGAAAAAA CAGT TTTT ACCG GCGTTGTTAGAGCGT YPO2728 3060699 - 3061178 + | hypothetical protein YPO2729 3061203 - 3061550 + | hypothetical protein TERM 3272 3061597 - 3061569 - T 78 -8.9 -3.77808 | opp_overlap 3061569 3061581 TCCAGGATAATAGAA GGGCTCTCTGC TTGGGTG GCAAAGAACCC ATTAATGCATTAGCT YPO2730 3061948 - 3061607 - | hypothetical protein TERM 3273 3062015 - 3062031 + r 75 -2.3 -5.38326 | GGTTACTGTATTGAT GTGTA TGCATTT TACAC TTTTTATTTAATTAA TERM 3274 3062236 - 3062213 - R 90 -2.4 -5.94214 | gap 1 AATAGAATAAAAAAA TGTCCCAACAC CGA GTGACGG-ACA CATCGAACTGATACC YPO2731 3064363 - 3062324 - | hypothetical protein TERM 3275 3063278 - 3063296 + g 70 -2.4 -5.04265 | TTCATCGCGGCTGTT TAAAACCC ATG GGCTTTTG TTTTTACTCTTTTTT lemA 3064910 - 3064368 - | hypothetical protein TERM 3276 3065238 - 3065224 - H 74 -7.8 -3.91364 | opp_overlap 3065224 3065221 AAACGGATATAACAA GCCCCT CCT AAGGGC TAGTTACTGGTTCGA YPO2733 3065526 - 3065993 + | hypothetical protein TERM 3277 3066467 - 3066481 + GF 73 -5.6 -4.42464 | overlap 3066469 AAATCTGACCTGTAT CCGCGA TGA TCGCTG TTTATTTCAGCAGTT ccmA 3066438 - 3067094 + | cytochrome c biogenesis protein CcmA ccmB 3067064 - 3067723 + | heme exporter protein B ccmC 3067786 - 3068523 + | putative heme exporter protein C TERM 3278 3068562 - 3068573 + G 76 -5.8 -4.61868 | overlap 3068558 GAATTTTTTGCCATG GGCA ACTA TGCC TTTTATGTCTGGCTC ccmD 3068520 - 3068822 + | putative heme exporter protein D ccmE 3068819 - 3069313 + | cytochrome c-type biogenesis protein CcmE TERM 3279 3070327 - 3070309 - g 74 -8.1 -4.09685 | gap 1 CTGTATGCGGTAAAA GGC-GCGC AGGT GCGCAGCC GGACTCAGCATGAAG ccmF 3069310 - 3071280 + | putative cytochrome c-type biogenesis protein ccmG 3071277 - 3071843 + | thiol:disulfide interchange protein DsbE ccmH 3071840 - 3072352 + | putative cytochrome c-type biogenesis protein YP02742 3072352 - 3073578 + | putative cytochrome c-type biogenesis protein TERM 3280 3073588 - 3073571 - f 78 -5.6 -4.88895 | AAATAAATAAACAAA TCCCTT AAGTGA AAGGGA TAGACAGACTTTCAT vacJ 3073614 - 3074378 + | VacJ lipoprotein TERM 3281 3074430 - 3074457 + T 100 -17.2 -3.07113 | opp_overlap 3074430 3074437, overlap 3074432 3074437 CCGCCGTATTCAAAA TAGAAAAGCGCC ATCA GGCGCTTTTCTA TTGGATAAGGTGATG TERM 3282 3074457 - 3074430 - T 100 -17.2 -4.18018 | opp_overlap 3074430 3074432 3074437, overlap 3074437 CCGCCGTATTCAAAA TAGAAAAGCGCC ATCA GGCGCTTTTCTA TTGGATAAGGTGATG TERM 3283 3074432 - 3074455 + T 100 -15.4 -3.09327 | opp_overlap 3074430 3074437, overlap 3074430 3074437 GCCGTATTCAAAATA GAAAAGCGCC ATCA GGCGCTTTTC TATTGGATAAGGTGA TERM 3284 3074450 - 3074437 - T 100 -9.5 -4.90471 | opp_overlap 3074432 3074430 3074437, overlap 3074430 ATTCAAAATAGAAAA GCGCC ATCA GGCGC TTTTCTATTGGATAA TERM 3285 3074437 - 3074450 + T 100 -9.5 -4.68724 | opp_overlap 3074437 3074430, overlap 3074432 3074430 ATTCAAAATAGAAAA GCGCC ATCA GGCGC TTTTCTATTGGATAA fadL 3075756 - 3074485 - | long-chain fatty acid outer membrane transporter YPO2745 3076164 - 3076460 + | hypothetical protein TERM 3286 3076517 - 3076497 - f 93 -12.6 -3.18239 | opp_overlap 3076497 TACATACCTGACCAA CGCGAAGC CTTTT GCTTCGCG TTATTACTTTAGATG TERM 3287 3076497 - 3076517 + F 100 -12.6 -3.90425 | opp_overlap 3076497 TACATACCTGACCAA CGCGAAGC CTTTT GCTTCGCG TTATTACTTTAGATG TERM 3288 3076683 - 3076695 + F 79 -7.7 -4.34559 | TAACAATGTTCGGAT CAGGT CAG ACCTG TTATTTGTTATCTTT TERM 3289 3077824 - 3077795 - g 75 -9.3 -3.85698 | opp_overlap 3077794 3077792 CCTTCGCCGCACAAA CACTGGCTAACCT GAAA ATGTTTGCCAGTG ATACTTTTGCTCGCG fadI 3076747 - 3078057 + | 3-ketoacyl-CoA thiolase TERM 3290 3078806 - 3078835 + G 71 -5.1 -4.47456 | gap 1, overlap 3078809 ATTACCATGGCAGGA GCGTTTACTCAGTG GGC CGTTGGGTAAA-GC TTTATTATTCCGTAT TERM 3291 3079456 - 3079481 + G 71 -11.2 -2.78813 | overlap 3079445 3079455 3079474 3079476 CCATCAGCCAGATTG CTGCTTTGGC GCAACG GCCAGAGCAG GTTATTGGCCTGCAC TERM 3292 3079623 - 3079606 - g 71 -7 -4.21827 | GGAAACAGGGTAAAA CAGCCA TTGTGG TGGCTG ATCGCGCTGGGTTCT fadJ 3078057 - 3080381 + | multifunctional fatty acid oxidation complex subunit alpha sixA 3080950 - 3081441 + | phosphohistidine phosphatase TERM 3293 3081510 - 3081529 + T 100 -15 -3.8579 | ATCAACGTCTAACTG GCGCGGCA TTCT TGCCGCGC TTTCGCTTATTGGCT YPO2749 3082357 - 3081827 - | hypothetical protein YPO2750 3082727 - 3083659 + | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase aroC 3083736 - 3084821 + | chorismate synthase TERM 3294 3084953 - 3084975 + G 70 -9.1 -3.57462 | GGTGGCTTTGCTAAT GGTTGCGTG ATTGG CGCGCAGCC TTTGCCGCTCGAGTC mepA 3084827 - 3085654 + | penicillin-insensitive murein endopeptidase TERM 3295 3085742 - 3085772 + G 74 -11.1 -3.04263 | gap 1, overlap 3085739 ATTGATTCCATTGCC G-GCGGGGGCGGCT TGTT AACCGTCCCCGCAC TGTTAGCGGTGGGAT yfcA 3085658 - 3086464 + | hypothetical protein TERM 3296 3086510 - 3086538 + F 82 -10.3 -3.66883 | AATTTAGGCACCCAC CACCGCTAAATAC GGT GACTTTAGCGGTG TTTACCCTCTCTTAC TERM 3297 3086686 - 3086699 + G 82 -6.7 -4.77438 | overlap 3086666 CGATGAAGAATCTCC TCACC ATCG GGTGA TTTTTGCTCATGGCT YPO2754 3086564 - 3087106 + | hypothetical protein YPO2755 3087164 - 3087442 + | hypothetical protein mnmC 3089689 - 3087620 - | 5-methylaminomethyl-2-thiouridine methyltransferase TERM 3298 3088401 - 3088415 + g 76 -5.7 -4.65916 | AGTTCATGTTGGTAG TGGCA GGTCA TGCCA TTTTGTTGCGCTAGC fabB 3089861 - 3091084 + | 3-oxoacyl-(acyl carrier protein) synthase I TERM 3299 3091124 - 3091155 + T 90 -11.6 -3.62046 | opp_overlap 3091130 GATTCAGATTTACTC CCCAAAGCCTACGA GAGA TCGTAGGCTTGAGG TTATTGACAAAGTGC TERM 3300 3091149 - 3091130 - T 91 -12.2 -3.55761 | opp_overlap 3091124 GATTTACTCCCCAAA GCCTACGA GAGA TCGTAGGC TTGAGGTTATTGACA TERM 3301 3091228 - 3091254 + T 72 -10.1 -2.88849 | gap 1, opp_overlap 3091217, overlap 3091223 3091229 ACATCCATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCTCTGCC TERM 3302 3091229 - 3091255 + T 84 -10.1 -3.82218 | gap 1, opp_overlap 3091217, overlap 3091223 3091228 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCTCTGCCT TERM 3303 3091319 - 3091338 + T 100 -12.2 -5.24003 | TGTCAGCAGTCTGAA GCCTACGA GAGA TCGTAGGC TTTTTACTTTTTATT YPO2758 3092187 - 3091492 - | putative aspartate/glutamate racemase TERM 3304 3092261 - 3092222 - H 72 -9.2 -3.14344 | gap 1 GACTGGGGTGAGCAA GGGCAGCTAACTCCCTGCA TCT TGAAGGGCGACAGC-GCCC CCACGTTATAAGTGA mrpA 3092975 - 3093505 + | putative mannose-resistant/Proteus-like fimbrial protein TERM 3305 3093531 - 3093577 + T 75 -10.5 -2.87564 | gap 1, opp_overlap 3093513 3093530 3093542, overlap 3093542 3093561 TAAGCTGTCTAAATT GCTTA-AAAAAAGCATGTGGAA GATA TTCTGCATGCTTTTTTATATGC TGTATAAAAGAATGA TERM 3306 3093542 - 3093565 + T 100 -8.2 -5.40625 | opp_overlap 3093530 3093542, overlap 3093531 3093561 AATTGCTTAAAAAAA GCATGTGGAA GATA TTCTGCATGC TTTTTTATATGCTGT TERM 3307 3093565 - 3093542 - T 84 -3.8 -5.41746 | opp_overlap 3093531 3093542 3093561, overlap 3093530 AATTGCTTAAAAAAA GCATGTGGAA GATA TTCTGCATGC TTTTTTATATGCTGT TERM 3308 3093745 - 3093774 + T 93 -10.9 -4.22132 | opp_overlap 3093751, overlap 3093751 GCGTAAGCGGTTTGT TAAAAAGCGACTG ATAT TAGTCGCTTTTTG TATTTTTGTATTTAA TERM 3309 3093768 - 3093751 - T 76 -7 -4.56597 | opp_overlap 3093745 3093751 GCGGTTTGTTAAAAA GCGACT GATATT AGTCGC TTTTTGTATTTTTGT TERM 3310 3093751 - 3093768 + T 100 -7.7 -5.38398 | opp_overlap 3093751, overlap 3093745 GCGGTTTGTTAAAAA GCGACTG ATAT TAGTCGC TTTTTGTATTTTTGT flk 3094884 - 3093847 - | flagella biosynthesis regulator YPO2761 3096086 - 3095169 - | hypothetical protein YPO2762 3096312 - 3097097 + | putative AraC-family regulatory protein pdxB 3097144 - 3098271 + | putative D-isomer specific 2-hydroxyacid dehydrogenase TERM 3311 3098341 - 3098309 - T 100 -11.3 -4.32046 | opp_overlap 3098316, overlap 3098313 3098315 3098316 CGCGTAAAAATTAAA TAAATATCCTCCGGC ATA GCCGGAGGTTTTTCA TATGCGCCTATAAGG TERM 3312 3098337 - 3098313 - T 100 -9.9 -4.71307 | opp_overlap 3098316, overlap 3098309 3098315 3098316 TAAAAATTAAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCATATGCGCCTAT TERM 3313 3098335 - 3098315 - T 100 -12.5 -3.92649 | opp_overlap 3098316, overlap 3098313 3098309 3098316 AAAATTAAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 3314 3098334 - 3098316 - T 100 -16 -2.93149 | opp_overlap 3098316, overlap 3098315 3098313 3098309 AAATTAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 3315 3098316 - 3098334 + T 100 -16 -4.8048 | opp_overlap 3098315 3098313 3098309 3098316 AAATTAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC tnp 3098873 - 3098415 - | transposase for the IS1541 insertion element TERM 3316 3098986 - 3099004 + H 100 -16 -4.37092 | opp_overlap 3098986 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAT TERM 3317 3099004 - 3098986 - H 100 -16 -3.07307 | opp_overlap 3098986 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAT TERM 3318 3099044 - 3099022 - H 78 -9.1 -3.78934 | opp_overlap 3099024, overlap 3099024 TTCTGGGCACAATAA CAGGGCGGT GTGTT ACCGCCCTT GCTGTTCAATAACGT TERM 3319 3099024 - 3099042 + H 95 -12.4 -3.38072 | opp_overlap 3099022 3099024 CTGGGCACAATAACA GGGCGGTG TGT TACCGCCC TTGCTGTTCAATAAC TERM 3320 3099042 - 3099024 - H 89 -11.7 -3.4811 | opp_overlap 3099024, overlap 3099022 CTGGGCACAATAACA GGGCGGT GTGTT ACCGCCC TTGCTGTTCAATAAC TERM 3321 3100026 - 3099990 - g 71 -10.7 -3.11459 | opp_overlap 3099990 3099988 AAGATGATTATCCAA CCCAGGTCAGCGACGCC TCC GGCAGCGATGCCCTGAG TATTGGTTGCGTTCG asd 3099152 - 3100162 + | putative semialdehyde dehydrogenase TERM 3322 3100247 - 3100231 - f 87 -6.5 -5.1356 | opp_overlap 3100231 GCTCAGCAAGAAAAA CCGGC AGAAGTG GCCGG TTTGAAAATTGCGTT TERM 3323 3100998 - 3101019 + G 71 -5.1 -4.58395 | overlap 3100995 CCACTTCGCGTTACC CAAAGTTCC TATG GGGCCTTTG TTTTTGGCGGATGAC truA 3100249 - 3101043 + | tRNA pseudouridine synthase A dedA 3101200 - 3101862 + | hypothetical protein TERM 3324 3101972 - 3102008 + F 78 -2.2 -5.4505 | gap 1, overlap 3101981 3101983 CAATCCAAGTTTCGG TGCCTTAGCCACGTCGC ACTG GCG-TGTATCTCAGGCA TTTTTTATTGGAGAG accD 3102093 - 3103007 + | acetyl-CoA carboxylase subunit beta TERM 3325 3103017 - 3103045 + F 76 -10.4 -2.90804 | gap 1, opp_overlap 3103017, overlap 3103016 GTCTGATTAACTCAA CGGGCATCACTCT TGTA AGA-TGGTGCCCG GTTATTGTGCCTTAT TERM 3326 3103280 - 3103304 + G 90 -13.5 -3.93262 | opp_overlap 3103272 3103267 CATCAAACTCCCCAA GCCACGTCGCC TTT GGCCGCGTGGC TTTGCTATCTTGAGC folC 3103256 - 3104560 + | bifunctional folylpolyglutamate synthase/ dihydrofolate synthase TERM 3327 3105103 - 3105082 - g 79 -5.1 -5.05113 | CCGATAGAAACAAAA CCAGCAG AGAAAAAA CCGCTGG AAGTGAAACCTAAGC TERM 3328 3105160 - 3105148 - g 80 -4.7 -5.06414 | opp_overlap 3105150, overlap 3105149 CCGGTGGAAGAAAAA GCGCC AGT GGGGC AGGCTTATGTTGTCC dedD 3104680 - 3105402 + | hypothetical protein TERM 3329 3105905 - 3105915 + G 79 -6.8 -4.71426 | opp_overlap 3105904 TGTTCGCAACGGAAT TGCC ATC GGCA TTTTGTTCATCGCGA cvpA 3105714 - 3106223 + | colicin V production protein purF 3106236 - 3107753 + | amidophosphoribosyltransferase TERM 3330 3107811 - 3107792 - f 76 -10.8 -2.57344 | overlap 3107791 3107794 TATGGCGGGTAGAAG TATGACGG GTAT CCGTCATA AAACAGAATGAGCCA TERM 3331 3107860 - 3107831 - f 77 -6.5 -4.71382 | gap 2, opp_overlap 3107831 AGAATGAGCCAAAAA GGTGCAACCTGCG TTTAGG CGC-GG-TGCACC TTTTTATTCATGGTG TERM 3332 3107831 - 3107860 + F 90 -7.2 -5.15167 | gap 2, opp_overlap 3107831 AGAATGAGCCAAAAA GGTGCAACCTGCGT TTAG GCGC-GGT-GCACC TTTTTATTCATGGTG ubiX 3108000 - 3108572 + | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase TERM 3333 3108736 - 3108765 + F 90 -7.1 -5.18995 | overlap 3108737 TATGCTCCACAATGA TCCTGCAACAGCG ATGG TGCTGTAGTAGGG TTTTTGTATTCTGTT TERM 3334 3108737 - 3108764 + F 73 -8.4 -3.68957 | overlap 3108736 ATGCTCCACAATGAT CCTGCAACAGCG ATGG TGCTGTAGTAGG GTTTTTGTATTCTGT hisJ 3109091 - 3109879 + | histidine-binding periplasmic protein TERM 3335 3110356 - 3110368 + G 88 -10.5 -4.21922 | opp_overlap 3110353 3110356 TAAAGGGCAAATTGA GGCCG CGA CGGCC TTTGGTTTTACCTCC hisQ 3109982 - 3110668 + | histidine transport system permease protein HisQ TERM 3336 3110933 - 3110951 + G 83 -3.1 -5.42259 | TGGAGATAATCCGAG GCAATGA TCTGC TCAATGC TTTTTTTCGCAGTGG hisM 3110665 - 3111381 + | histidine transport system permease protein HisM hisP 3111395 - 3112192 + | histidine/lysine/arginine/ornithine transporter subunit YPO2778 3113224 - 3112316 - | hypothetical protein TERM 3337 3113444 - 3113432 - H 100 -4.1 -6.47325 | AAAAAATAAAAAAAA GAATC AGG GACTC AATAAACCGCTCAAC YPO2779 3113572 - 3114270 + | hypothetical protein TERM 3338 3114502 - 3114512 + G 71 -6.8 -4.16146 | overlap 3114492 TGGTTCGTTACCGGC CACG GAA CGTG TTTTGGCGATCTTTT YPO2780 3114471 - 3115046 + | phosphodiesterase YPO2781 3115268 - 3115816 + | hypothetical protein TERM 3339 3115840 - 3115864 + T 90 -5.7 -5.56673 | opp_overlap 3115840 TGCTCAATAAAAAAA CCAAAGCCC CGCTAAA GCGCTTTGG TTTTTTATTATCAGT TERM 3340 3115864 - 3115840 - T 100 -6.4 -5.7946 | opp_overlap 3115840 TGCTCAATAAAAAAA CCAAAGCCCC GCTAA AGCGCTTTGG TTTTTTATTATCAGT TERM 3341 3115902 - 3115885 - T 100 -12.7 -3.62572 | TATTATCAGTTTAAA CCCCCTC CAAG GAGGGGG TGATGGTGACGTCTT ulaA 3117189 - 3115933 - | ascorbate-specific PTS system enzyme IIC TERM 3342 3118511 - 3118532 + G 77 -10.1 -3.74693 | TTTATTATCGAGTTC GGTGACCGC CTGA GCGATCACC TTTAATACGGTGGCA y1062 3117329 - 3118537 + | transposase for the IS285 insertion element TERM 3343 3119428 - 3119449 + T 73 -7.2 -4.15114 | CAACAGCGCCTTTGT CGGTGCCG ATGCCG CCGCACCG TTATTCTTTAATATT TERM 3344 3120275 - 3120249 - T 95 -8.1 -5.16237 | gap 2 AAGGGGATCAAAAAA GCCCCAC-A-GGT CAC ACCATTGTGGGGC AGCAATCTCGCGTTT nlp 3120561 - 3120316 - | putative DNA-binding protein TERM 3345 3121010 - 3120986 - H 73 -5.7 -4.44355 | opp_overlap 3120986, overlap 3120988 TAATTCTAAAAATAA GTTGAATGGCT CAT ACCCATTCAGC TCTGGTCATCTTCTT TERM 3346 3121023 - 3121035 + H 78 -4.1 -5.24551 | overlap 3121031 AGCTCTGGTCATCTT CTTCG TAA TGAAG TTTTTCTTCATTTAA TERM 3347 3121472 - 3121486 + G 100 -5.7 -5.76949 | CTATTTTTTCCTGTA CCGAT CCCAC ATCGG TTTTTTTTGGAAGTC YPO2788 3121234 - 3121815 + | hypothetical protein YPO2790 3122083 - 3122484 + | hypothetical protein YPO2792 3122738 - 3123118 + | hypothetical protein YPO2793 3123702 - 3123130 - | hypothetical protein TERM 3348 3123190 - 3123209 + g 73 -10.8 -3.25823 | opp_overlap 3123184 3123183 3123181 TATAAATATGTTCAA GCACACTT GAAA AAGTGTGC TTGATATCAGAAACG YPO2794 3123977 - 3123726 - | hypothetical protein YPO2795 3124255 - 3124016 - | hypothetical protein TERM 3349 3124981 - 3125003 + H 78 -9.8 -3.54926 | opp_overlap 3124985, overlap 3124979 GATAAACATAACGTT CAAACCGTCC CAA GGGCGGTGTG TCTCTTTTTACAATG TERM 3350 3125616 - 3125593 - g 82 -11.8 -3.53012 | gap 1, opp_overlap 3125584 3125592 3125603 CGGGTCTGGTCGAAA TCG-GCCCTTC CTG GAAGGGCACGA GTATCGTGCCGCTTC yapC 3125064 - 3126980 + | putaive autotransporter protein TERM 3351 3127095 - 3127069 - f 84 -10.1 -3.82218 | gap 1, opp_overlap 3127078, overlap 3127070 3127085 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 3352 3127096 - 3127070 - f 72 -10.1 -2.88849 | gap 1, opp_overlap 3127078, overlap 3127069 3127085 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT TERM 3353 3127172 - 3127193 + F 91 -6.5 -5.56264 | opp_overlap 3127169, overlap 3127175 CTTTGTCAATAACCT CAGCCCCTC TTCT GAGGGGTTA TTTTTTCTATTTCAC TERM 3354 3127175 - 3127190 + F 100 -10.4 -4.8277 | opp_overlap 3127169, overlap 3127172 TGTCAATAACCTCAG CCCCTC TTCT GAGGGG TTATTTTTTCTATTT TERM 3355 3127246 - 3127234 - f 95 -3.4 -6.28631 | TAAATTAAAAAAAAA TGCT CAGTC AGCA AGATAATTTCCACAA YPO2797 3127515 - 3128096 + | hypothetical protein YPO2798 3128461 - 3128111 - | conserved hypothetical protein (partial) TERM 3356 3128524 - 3128503 - R 84 -10.1 -3.74693 | TGCCACCGTATTAAA GGTGATCGC TCAG GCGGTCACC GAACTCGATAATAAA y1062 3129706 - 3128498 - | transposase for the IS285 insertion element TERM 3357 3130732 - 3130743 + G 80 -3 -5.36441 | CGGTCTCTTTCTCAC TGTT CGAC AACA TTTTTTATCTCAACA YPO2801 3130158 - 3132365 + | hypothetical protein YPO2802 3132358 - 3132888 + | hypothetical protein TERM 3358 3132920 - 3132907 - f 82 -2.3 -5.72254 | overlap 3132912 TTAAACAATAAAAAA GAACC GTCT GGCCC CATGCCAACCCGTTA bglB 3133047 - 3135428 + | putative beta-glucosidase YPO2804 3137135 - 3135507 - | hypothetical protein TERM 3359 3136311 - 3136325 + g 70 -3.4 -4.8066 | AGCCCCCAGTAATAG CGGCGC ATC GGGCTG TTTTTGCATTGTCTT YPO2805 3137566 - 3138459 + | putative aldo/keto reductase TERM 3360 3139320 - 3139298 - g 78 -6.2 -4.82901 | opp_overlap 3139281 TTGTTGGCACAAAAA CCTTGGATTG TGC CAATCCCCGG AACCACAAAACTGCA YPO2806 3138485 - 3139474 + | putative aldo/keto reductase TERM 3361 3139503 - 3139528 + T 100 -13.4 -3.15544 | opp_overlap 3139498 3139497 TCGCTCAAATTTCAT CTGGCTTACG ATAATC CGTAAGCCAG TTAATCCGAATAACG ptxR 3140422 - 3139529 - | putative LysR-family transcriptional regulatory protein TERM 3362 3140494 - 3140512 + H 100 -13.2 -4.01078 | CCAGGGGGTAATCTG CTCTCCTG ATT CAGGAGAG TTTATGGTCACTTTT y1093 3140516 - 3141538 + | transposase for insertion sequence IS100 TERM 3363 3141619 - 3141605 - g 77 -11.4 -3.3506 | overlap 3141596 TGGAAAGCCTTATAA GCGCAG CGC CTGCGC TGTCACAACAGGCAG YPO2809 3141535 - 3142317 + | transposase/IS protein TERM 3364 3142502 - 3142485 - T 86 -7.7 -4.61231 | gap 1, opp_overlap 3142485 3142485, overlap 3142487 TTAGACCCCCAAAAA CGGGAAGC CCT GCT-CCCG GTATTCGATTTCAGC YPO2811 3142989 - 3142684 - | hypothetical protein YPO2812 3143457 - 3143086 - | hypothetical protein TERM 3365 3143413 - 3143393 - G 79 -7.5 -4.58236 | TACAAAAGATTAAAA GCCAGCACC AGC GGTGGTAGC GTTAATAAGGCGAAA ynbD 3144788 - 3143469 - | putative dual specificity phosphatase YPO2814 3146544 - 3144781 - | hypothetical protein TERM 3366 3146500 - 3146482 - G 74 -9.6 -3.64716 | opp_overlap 3146488, overlap 3146480 3146485 CCAGTGGCGAAAATA CAACGATG TTT CATCGCTG GCGGTGAACATGCCT YPO2815 3147173 - 3146541 - | putative acyltransferase ynbB 3148112 - 3147183 - | putative phosphatidate cytidylyltransferase YPO2817 3148707 - 3148105 - | putative CDP-alcohol phosphatidyltransferase YPO2818 3149167 - 3148934 - | hypothetical protein int 3149504 - 3149803 + | phage integrase (partial) YPO2820 3149886 - 3150224 + | hypothetical protein TERM 3367 3150287 - 3150246 - f 76 -10.3 -2.91702 | opp_overlap 3150251, overlap 3150251 AACACGATAAAATAT TAAAATGGCCGGAAGTTAA TGAT TTAGCTTACGGCCATTTTT TATGGCTCCCTGAAT TERM 3368 3150251 - 3150282 + F 100 -12.4 -5.28176 | opp_overlap 3150251 3150246 GATAAAATATTAAAA TGGCCGGAAGTTAA TGAT TTAGCTTACGGCCA TTTTTTATGGCTCCC TERM 3369 3150282 - 3150251 - f 100 -10.2 -4.58236 | opp_overlap 3150251, overlap 3150246 GATAAAATATTAAAA TGGCCGGAAGTTAA TGAT TTAGCTTACGGCCA TTTTTTATGGCTCCC YPO2821 3150510 - 3150857 + | hypothetical protein YPO2822 3150971 - 3151171 + | hypothetical protein YPO2823 3151430 - 3151612 + | putative regulatory protein TERM 3370 3151625 - 3151641 + F 85 -7.2 -4.89567 | TAAATCACTACCTGA CCCGTC TAAAT GGCGGG TTTTGTATTTTAAGC folD 3151967 - 3152833 + | bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase YPO2825 3152848 - 3153060 + | hypothetical protein TERM 3371 3153089 - 3153075 - T 83 -11.4 -3.02263 | opp_overlap 3153074 ATAGCCGTTGTAATA GCCAGC ATT GCTGGC CTATTGAACAATAAA TERM 3372 3153129 - 3153105 - T 100 -9.9 -4.46854 | opp_overlap 3153108, overlap 3153107 3153108 CTATTGAACAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCATATGCGCCTAT TERM 3373 3153127 - 3153107 - T 100 -12.5 -3.83566 | opp_overlap 3153108, overlap 3153105 3153108 ATTGAACAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 3374 3153126 - 3153108 - T 100 -16 -2.89055 | opp_overlap 3153108, overlap 3153107 3153105 TTGAACAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 3375 3153108 - 3153126 + T 100 -16 -4.8048 | opp_overlap 3153108 3153107 3153105 TTGAACAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC tnp 3153665 - 3153207 - | transposase for the IS1541 insertion element TERM 3376 3153796 - 3153778 - R 100 -16 -3.07307 | opp_overlap 3153778 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 3377 3153778 - 3153796 + r 100 -16 -4.36914 | opp_overlap 3153778 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 3378 3153832 - 3153815 - R 100 -8.4 -5.24129 | opp_overlap 3153815 TCTGGGCACAAAAAA GCCGAC TTTCAC GTCGGC TATCATCGTTATTTA upp 3154467 - 3153841 - | uracil phosphoribosyltransferase purI 3154864 - 3155907 + | phosphoribosylaminoimidazole synthetase TERM 3379 3156209 - 3156221 + G 76 -7.7 -4.36262 | ATGCCAAGGCTTTTA CTGAC CGC GTCAG TTTTGATCTGGCTCT purN 3156022 - 3156660 + | phosphoribosylglycinamide formyltransferase speG 3156889 - 3157434 + | spermidine acetyltransferase TERM 3380 3157439 - 3157458 + T 88 -10 -4.20768 | AAAATGCTTAATACG TTGGGGTC AGAT GGCCCCAA TTGTTTCTTCCCCGT TERM 3381 3157995 - 3157985 - T 74 -6.8 -4.37658 | AATTGTGTCATAAAA TGCC CCA GGCA AGCCAATAACACCTT pstb 3159757 - 3158945 - | putative phosphate transport ATP-binding protein pstA 3161497 - 3159785 - | putative phosphate transport system permease TERM 3382 3160834 - 3160849 + g 70 -3.2 -4.77173 | TGCTGTCTAAATCTC CGGC AATTTGCA GCCG TTTCTTTTGTAACCG pstC 3163746 - 3161497 - | putative phosphate transport system permease TERM 3383 3162788 - 3162798 + g 74 -8.2 -4.09685 | opp_overlap 3162787 GTCAAATGGAACGAT GGGC TTG GCCC TTTTCGCACATCAAA ppk 3163999 - 3166062 + | polyphosphate kinase TERM 3384 3167140 - 3167128 - g 71 -6.3 -4.37092 | overlap 3167134 ATGGTTGGCACAAAA TACCA AGC TGGTA CAGCCCCAACTGGAA ppx 3166073 - 3167632 + | exopolyphosphatase TERM 3385 3167685 - 3167649 - f 86 -8 -4.65916 | gap 1, opp_overlap 3167652, overlap 3167651 CTGACGCTAATAAAA TCG-TGCACCGGGTGGT TGTC ATCACCCGGTGCGTCAA TTGACAGCATGAGCG TERM 3386 3167652 - 3167681 + F 100 -16.5 -2.52676 | opp_overlap 3167651 3167649 ACGCTAATAAAATCG TGCACCGGGTGGT TGTC ATCACCCGGTGCG TCAATTGACAGCATG yfgG 3167744 - 3167956 + | hypothetical protein mgtE 3168008 - 3169483 + | putative divalent cation transport protein YPO2840 3169623 - 3170975 + | putative chaperone TERM 3387 3170992 - 3171019 + T 100 -9.9 -5.09204 | overlap 3170988 CCCTATTATGTTCAC CTCTCAGTGAG TTATCT CGCACTGAGAG TTTTTGTTGGCGTAT YPO2841 3172095 - 3171247 - | putative ABC transporter permease YPO2842 3173422 - 3172157 - | putative ABC transporter permease TERM 3388 3172999 - 3173020 + g 82 -11.6 -3.70149 | TGATTAGCGCTTCAC GTACCGGC CCTTCA GCCGGTAC TTTCCGTAGTGTCGA YPO2843 3174497 - 3173469 - | putative transport system periplasmic protein TERM 3389 3173570 - 3173548 - G 74 -7.6 -4.13767 | TTGTTCATGGGAAAA GCCTCAGCCA GGT TGGCTGGCGC AGTGGGTAAATTAGC goaG 3175863 - 3174550 - | 4-aminobutyrate aminotransferase TERM 3390 3174778 - 3174807 + g 70 -4.3 -4.62783 | gap 1 TCCACGCGCACGAAT GCCCACAATGGCCG CAT TGCTCATT-TGGGC TTTTTCCAGTACGTC TERM 3391 3176714 - 3176702 - g 73 -9.1 -3.67597 | GCCTGGATTGAAGAA CCCAG CTA CTGGG GGATCCGCAACGTGT TERM 3392 3177049 - 3177036 - g 76 -8.1 -4.26076 | GTACCTTCAGTAAAA CCCTG TATC CAGGG ATGCGTATCAGCTAC TERM 3393 3177422 - 3177405 - g 73 -5.5 -4.68593 | gap 1, opp_overlap 3177406 3177407, overlap 3177406 3177407 GCTATTACTTAAAAA GTCCCCCG CGA CGAGGG-C TGTTACTCGGTTATG YPO2845 3176021 - 3177526 + | putative GntR-family regulatory protein YPO2846 3177909 - 3178994 + | putitive ABC-transporter ATP-binding protein TERM 3394 3179354 - 3179343 - f 75 -2.2 -5.31877 | gap 1, overlap 3179344 AGCCACGATAAAAAA GGACG CTT CG-CC ATCATGAAATCTCAA yegM 3179358 - 3180692 + | multidrug efflux system subunit MdtA TERM 3395 3180711 - 3180736 + G 71 -6.1 -4.30719 | gap 1, opp_overlap 3180698 3180713, overlap 3180715 3180724 AAGTGATGCCTCCAA CACCCGGTGGCG GGC CGTCAC-GGCTG TTTATTCTGCGCCCG TERM 3396 3180724 - 3180734 + G 70 -8.2 -3.75817 | overlap 3180715 3180711 AACACCCGGTGGCGG GCCG TCA CGGC TGTTTATTCTGCGCC TERM 3397 3181545 - 3181529 - g 76 -5.8 -4.67697 | overlap 3181530 GCGGAAAATAACAAA CTGGCC GCCTG GGCCAA TACTCAATCAGCAAT TERM 3398 3182313 - 3182348 + G 77 -9 -3.97042 | CGTGGCTGACCCTAA GTGTCGCGTTCAGCAC ACTG GTGCTGACGGTGATAC TTTACTTGCTGATCC yegN 3180692 - 3183850 + | multidrug efflux system subunit MdtB yegO 3183847 - 3186921 + | multidrug efflux system subunit MdtC TERM 3399 3187378 - 3187419 + G 100 -10.8 -4.75404 | gap 1 GCGTTTGTCACACTG CCCGGCCAG-ATTGGGCCA TTAGT TGGCCCGGCGCTGGGCGGG TTTTTAGTGGAATTT TERM 3400 3188012 - 3188031 + G 72 -8.6 -3.9461 | CAATCATGGGTTGGA CACTGCTG ATGC CAGTAGTG TTATTCTTCCAAGGC yegB 3186955 - 3188352 + | multidrug efflux system protein MdtE TERM 3401 3189387 - 3189375 - f 78 -4.1 -5.18726 | CTTCCAGAACAAAAA GATGA CCA TCACC GCCCACCTGCCTGAA baeR 3189777 - 3190496 + | DNA-binding transcriptional regulator BaeR YPO2854 3190633 - 3190971 + | hypothetical protein TERM 3402 3191031 - 3191053 + F 79 -7.7 -4.32046 | ACGACCACTTATCCC TGCGCGG GGCCATTAA CCGCGCA TTTCATTTTTGCACG YPO2855 3191246 - 3192640 + | putative protease TERM 3403 3192660 - 3192678 + F 85 -6 -5.17353 | opp_overlap 3192660 ATTCAATAAAATGAA TGCCAC AGATAAA GTGGCA TTTTTTAGTAAATAT TERM 3404 3192794 - 3192821 + F 100 -13.5 -5.43553 | AGGAACCACCTCCTT GGCTAGCCCAA TCTCCC TTGGGCTGGCC TTTTCTTTTTTCCCT TERM 3405 3194041 - 3194007 - g 74 -6.5 -4.36508 | gap 1, overlap 3194004 TGAGAAAAATAAGAA TGTTATCGACGCCACG GTAC CTTGGC-TCGATATCA CTGCACCGAACGATA YPO2856 3193276 - 3194166 + | lipid kinase TERM 3406 3194370 - 3194330 - T 76 -6.7 -4.56113 | opp_overlap 3194340 3194341, overlap 3194332 AACAGAGTAAATAAA CAGCGGAGCACGGCGAGAA CCG CCCTTGTCTTGCTCCGCCA TTGGCGATTCGGGGC TERM 3407 3194368 - 3194332 - T 81 -9.3 -3.8721 | opp_overlap 3194340 3194341, overlap 3194330 CAGAGTAAATAAACA GCGGAGCACGGCGAGAA CCG CCCTTGTCTTGCTCCGC CATTGGCGATTCGGG TERM 3408 3194423 - 3194400 - T 73 -8.2 -3.61715 | CATTGTTGGCAATAA GTCATCACTC ATAA GAGTCATGAC GTGCAAAACTCAGCG YPO2857 3194897 - 3194433 - | hypothetical protein TERM 3409 3195386 - 3195375 - g 82 -7.2 -4.74518 | opp_overlap 3195377 AATTATCAAAACAAA CGCG GTAC CGCG AACGGTTTTGTCATT YPO2858 3195291 - 3196061 + | hypothetical protein TERM 3410 3196192 - 3196145 - T 79 -10.7 -3.08508 | gap 1, opp_overlap 3196152, overlap 3196142 3196149 CATTGGTGAAAATGA TGAACAGGCCCGATGCCCTG CCCCACCTC CAGGGTATCGG-CCTGTTCC AGCGCACGTTGCAAA thiD 3196923 - 3196123 - | phosphomethylpyrimidine kinase TERM 3411 3196188 - 3196149 - G 72 -10.1 -3.37533 | gap 1, opp_overlap 3196152, overlap 3196145 3196142 GGTGAAAATGATGAA CAGGCCCGATGCCCTG CCCCACCTC CAGGGTATCGG-CCTG TTCCAGCGCACGTTG TERM 3412 3196779 - 3196789 + g 74 -6.8 -4.36914 | GATAAACCGACTGCA CACC ACG GGTG TTTTGTGCCACCAGC TERM 3413 3196986 - 3196968 - H 75 -8.9 -3.57561 | GGCTAATGGCGTAAA TTCAGCC GCAGT GGCTGAA AAGAGAACGGCAGGT YPO2860 3197433 - 3197912 + | hypothetical protein TERM 3414 3198287 - 3198266 - T 84 -10.1 -3.74693 | TGCCACCGTATTAAA GGTGATCGC TCAG GCGGTCACC GAACTCGATAATAAA y1062 3199469 - 3198261 - | transposase for the IS285 insertion element TERM 3415 3199944 - 3199954 + G 76 -6.8 -4.49377 | GCTAAAATAGCCATT GTCG CGG CGAC TTCTTTTATTGTAGG YPO2863 3199551 - 3200195 + | hypothetical protein YPO2864 3200192 - 3200587 + | hypothetical protein YPO2865 3200651 - 3201046 + | hypothetical protein TERM 3416 3201060 - 3201050 - f 70 -2.6 -4.96848 | CTTTGTAGATAAAAA TAAA ATA TTTA ACAAGAAAATAATTT YPO2866 3201084 - 3201503 + | hypothetical protein YPO2867 3201567 - 3201965 + | hypothetical protein YPO2868 3201989 - 3202468 + | hypothetical protein TERM 3417 3202554 - 3202522 - T 100 -11.3 -5.1286 | opp_overlap 3202529, overlap 3202528 3202529 TAAAAACCATAAAAA TAAATATCCTCCGGC ATA GCCGGAGGTTTTTCA TATGCGCCTATAAGG TERM 3418 3202548 - 3202528 - T 100 -12.5 -4.09508 | opp_overlap 3202529, overlap 3202522 3202529 CCATAAAAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 3419 3202547 - 3202529 - T 100 -16 -3.04078 | opp_overlap 3202529, overlap 3202528 3202522 CATAAAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 3420 3202529 - 3202547 + T 100 -16 -4.8048 | opp_overlap 3202528 3202522 3202529 CATAAAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC tnp 3203086 - 3202628 - | transposase for the IS1541 insertion element TERM 3421 3203199 - 3203217 + r 100 -16 -4.36914 | opp_overlap 3203199, overlap 3203213 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAC TERM 3422 3203217 - 3203199 - R 100 -16 -3.07307 | opp_overlap 3203199 3203213 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAC TERM 3423 3203239 - 3203258 + r 70 -7.8 -3.58343 | opp_overlap 3203239, overlap 3203213 GGGCACAACAAAAAA CCGCCTAA TATT TAAGGCGG TTTCAGACTGCTGGC TERM 3424 3203258 - 3203239 - R 100 -7.8 -5.55769 | opp_overlap 3203213 3203239 GGGCACAACAAAAAA CCGCCTAA TATT TAAGGCGG TTTCAGACTGCTGGC TERM 3425 3203394 - 3203413 + r 84 -6.4 -4.98616 | opp_overlap 3203394 GTCAATAACCTCAAA CCGCCT AATATTCA AGGCGG TTTTTGCTATTTTCA guaA 3205038 - 3203461 - | bifunctional GMP synthase/glutamine amidotransferase protein TERM 3426 3205205 - 3205175 - R 100 -9.9 -5.79595 | opp_overlap 3205175 3205178 3205179 TTTTAAAATAAAAAA TAACCATCTGATG GCCAG CACCAGATGATTA TTTAACTAATTGTTA guaB 3206681 - 3205218 - | inositol-5-monophosphate dehydrogenase TERM 3427 3206142 - 3206158 + g 70 -2.2 -5.00616 | overlap 3206144 GACCAACACTTTCTC TACACG TTTTT CGTGCA TTTTTTGCAGCACAA xseA 3206851 - 3208230 + | exodeoxyribonuclease VII large subunit YPO2873 3208587 - 3208363 - | hypothetical protein YPO2874 3209592 - 3208636 - | hypothetical protein TERM 3428 3209743 - 3209732 - R 85 -2.2 -5.77988 | ATATAGAGAAAAAAA CCAG GCTA CTGA CAAACCCCGATGACG TERM 3429 3209820 - 3209794 - R 86 -10.1 -3.9749 | gap 1, overlap 3209795 AGGCAGAAGAGTAAA GTGTCCGCGCCA GAGA TGGCGCGG-CTC AAGCTCCCAAGGAAG engA 3211426 - 3209939 - | GTP-binding protein EngA TERM 3430 3211507 - 3211529 + r 100 -10.5 -4.63527 | opp_overlap 3211486 3211507 TTTTTAGAATACAAA CGGCCCCTG AGTCC CAGGAGCCG TTTTTGAGGTACTGG TERM 3431 3211529 - 3211507 - R 100 -13.4 -4.27117 | opp_overlap 3211507, overlap 3211486 TTTTTAGAATACAAA CGGCCCCTGA GTC CCAGGAGCCG TTTTTGAGGTACTGG yfgL 3212755 - 3211574 - | outer membrane protein assembly complex subunit YfgL yfgM 3213402 - 3212767 - | hypothetical protein hisS 3214690 - 3213416 - | histidyl-tRNA synthetase ispG 3216026 - 3214899 - | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase TERM 3432 3214942 - 3214958 + g 74 -9.5 -3.55203 | ACAATCCGGTTATTC GCATCAA GAA TTGATGC TTTGGCACGAATTTT TERM 3433 3215903 - 3215914 + g 73 -5.8 -4.44797 | opp_overlap 3215896, overlap 3215911 GGGCAACAGTGGCAT CCAC ATCC GTGG TTTTGGTATTGGTCA yfgA 3217125 - 3216088 - | hypothetical protein YPO2881 3217864 - 3217115 - | putative fimbrial biogenesis protein YPO2882 3219214 - 3218018 - | hypothetical protein TERM 3434 3219349 - 3219310 - R 100 -13.6 -4.11906 | opp_overlap 3219310 3219312, overlap 3219315 AGAATGTATAAATAA TAGAACGCCCCAGCAGAG CTGT CTCTACTGGGGCGTGGCA TTGTACAAATTTTAA TERM 3435 3219310 - 3219349 + r 74 -9.2 -3.36518 | opp_overlap 3219310 3219315, overlap 3219312 AGAATGTATAAATAA TAGAACGCCCCAGCAGAG CTGT CTCTACTGGGGCGTGGCA TTGTACAAATTTTAA TERM 3436 3219312 - 3219348 + r 80 -11.6 -2.61429 | gap 1, opp_overlap 3219310 3219315, overlap 3219310 AATGTATAAATAATA G-AACGCCCCAGCAGAG CTGT CTCTACTGGGGCGTGGC ATTGTACAAATTTTA TERM 3437 3219344 - 3219315 - R 100 -20.1 -3.93744 | opp_overlap 3219312 3219310, overlap 3219310 GTATAAATAATAGAA CGCCCCAGCAGAG CTGT CTCTACTGGGGCG TGGCATTGTACAAAT ndk 3219904 - 3219476 - | nucleoside diphosphate kinase TERM 3438 3219606 - 3219588 - G 70 -3 -4.86033 | opp_overlap 3219591 3219599, overlap 3219589 AAACTGTCAGAAAAA TCAGCACG TAG CGTACCGG CTAGTGCGTTATCTG YPO2884 3222651 - 3220231 - | hypothetical protein TERM 3439 3220826 - 3220814 - G 71 -6.3 -4.37092 | ACCGTCTCGATAAAA TGGTA ATC TACCA GTGCCAGTTCATAAC TERM 3440 3221773 - 3221752 - G 76 -3.1 -5.17507 | AAAACGCAATAAAAA TGACAAA TTACTACT TTTGTCA CTTAAATTAAACAAA TERM 3441 3222157 - 3222167 + g 76 -3.2 -5.12068 | GACTGTAGTTTGCAT TCCT GGA GGGA TTTTTATTGAATATA YPO2885 3222826 - 3223083 + | hypothetical protein TERM 3442 3224495 - 3224472 - g 83 -5.2 -5.13521 | overlap 3224475 AAAGCAGCTAAAAAA GAACTTGACG CTAT CGCCAAGGCC CAAAAAGCAGTTGAG TERM 3443 3224492 - 3224475 - g 82 -7.7 -4.64763 | overlap 3224472 GCAGCTAAAAAAGAA CTTGACG CTAT CGCCAAG GCCCAAAAAGCAGTT TERM 3444 3224808 - 3224791 - g 76 -6.3 -4.67942 | gap 1 CGGAACAAACTAAAA CAGCC-CT TGA AGCGGCTG AAAAAGCTAAAGAAG yapA 3223437 - 3227729 + | putative autotransporter protein TERM 3445 3227819 - 3227844 + T 100 -11.1 -4.7078 | opp_overlap 3227818 3227817 3227819 TGACTGATAAAAACC GCAGGGGGCTG CAAT TGGCTCCCTGC TTTTTACCTGATTAA TERM 3446 3231865 - 3231846 - T 81 -10.7 -3.32997 | GTGGCAGAAATGGAA GGGAGCC TCTATT GGCTCCC TGAGGTTATTGACAA TERM 3447 3231943 - 3231969 + T 72 -10.1 -2.88849 | gap 1, opp_overlap 3231932, overlap 3231938 3231944 ACATCCATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCTCTGCC TERM 3448 3231944 - 3231970 + T 84 -10.1 -3.82218 | gap 1, opp_overlap 3231932, overlap 3231938 3231943 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCTCTGCCT TERM 3449 3232031 - 3232050 + T 79 -10.7 -3.11281 | overlap 3232030 3232027 GTTTGTCAGCAGTCT GGGAGCC TCTATT GGCTCCC TATCCTTTTAGATAC YPO2888 3233022 - 3232069 - | enhanced serine sensitivity protein SseB TERM 3450 3232461 - 3232483 + g 86 -13.4 -3.61715 | TGTCTACCACCATTT CAGCGGGTTG CAC CAACCCGCCG TTCTTCAACAGCATC TERM 3451 3232749 - 3232727 - G 70 -8.5 -3.7398 | gap 1, overlap 3232725 TCCCAATGCAAAATA TTCACC-CCG TTAG CGGTGGTGAA ACTCATTTCGCCATC TERM 3452 3233079 - 3233053 - R 78 -10.1 -3.42459 | opp_overlap 3233057 3233077, overlap 3233047 3233057 CATCGAGAAGATGAA CGAAGGGACGC CAAAT GCGCCCCTTTG AGTCTTCTCAATTCA TERM 3453 3233057 - 3233075 + r 70 -7.3 -3.79071 | opp_overlap 3233057 3233053 3233047 GAGAAGATGAACGAA GGGACGC CAAAT GCGCCCC TTTGAGTCTTCTCAA TERM 3454 3233075 - 3233057 - R 76 -9.5 -3.4684 | opp_overlap 3233057, overlap 3233053 3233047 GAGAAGATGAACGAA GGGACGC CAAAT GCGCCCC TTTGAGTCTTCTCAA pepB 3234399 - 3233101 - | aminopeptidase B TERM 3455 3233491 - 3233512 + g 71 -6.5 -4.25104 | opp_overlap 3233506 GCCGGTTAAGGTGGC TGCGTCGAT AATC AACGGCGCA TTTTGCTCGGAGGCA TERM 3456 3234528 - 3234513 - R 100 -8.2 -5.49234 | ATACGCAATAAAAAA GGCCGC TTGC GCGACC CAGTCAGTATTCACT YPO2890 3234739 - 3234539 - | hypothetical protein fdx 3235104 - 3234769 - | adrenodoxin family ferredoxin hscA 3237059 - 3235107 - | chaperone protein HscA TERM 3457 3235169 - 3235138 - G 91 -15.2 -3.56568 | GAATGACCCGCTAAA GCACGGCGAATGGA AGCG TCCATCCGGCGTGC GGCAAAATCTTGCGT TERM 3458 3235278 - 3235257 - G 86 -13.7 -3.61398 | opp_overlap 3235254 CTGCTGCTGTAATAA CGCGACCGC TTGG GCGATCGCG GCACTTTCTTGCTCA hscB 3237826 - 3237302 - | co-chaperone HscB iscA 3238260 - 3237937 - | iron-sulfur cluster assembly protein nifU 3238916 - 3238530 - | scaffold protein iscS 3240176 - 3238947 - | putative aminotransferase YPO2897 3240724 - 3240230 - | DNA-binding transcriptional regulator IscR YPO2898 3241653 - 3240880 - | putative SpoU-family rRNA methylase TERM 3459 3241537 - 3241574 + g 87 -9.5 -4.29738 | gap 1, opp_overlap 3241527 3241540 3241557 AGAATCTGGTTTTAC CAAT-GGATTAACCAA ATATAGA TTGGTTAATCCCATTG TTTTCATGGCTCTGG suhB 3241772 - 3242575 + | inositol monophosphatase TERM 3460 3242629 - 3242606 - f 100 -10.3 -4.96848 | opp_overlap 3242606 CGTTTCAGATAAAAA GCCAGTCAG GGTTAG CCGACTGGC TTTTTTGTGCCCAGA TERM 3461 3242606 - 3242629 + F 100 -8.9 -5.24129 | gap 1, opp_overlap 3242606 CGTTTCAGATAAAAA GCCAGTCAGG GTTAG CC-GACTGGC TTTTTTGTGCCCAGA TERM 3462 3242648 - 3242666 + F 100 -16 -3.07307 | opp_overlap 3242648 TTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC TERM 3463 3242666 - 3242648 - f 100 -16 -4.36914 | opp_overlap 3242648 TTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC tnp 3242779 - 3243237 + | transposase for the IS1541 insertion element TERM 3464 3243311 - 3243343 + T 100 -11.3 -4.15044 | opp_overlap 3243318, overlap 3243315 3243317 3243318 CCTTATAGGCGCATA TGAAAAACCTCCGGC TAT GCCGGAGGATATTTA TTTATTGGGAACCCC TERM 3465 3243315 - 3243339 + T 100 -9.9 -4.67607 | opp_overlap 3243318, overlap 3243311 3243317 3243318 ATAGGCGCATATGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTTATTGGGAA TERM 3466 3243317 - 3243337 + T 100 -12.5 -3.94772 | opp_overlap 3243318, overlap 3243315 3243311 3243318 AGGCGCATATGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTTATTGGG TERM 3467 3243336 - 3243318 - T 100 -16 -4.8048 | opp_overlap 3243317 3243315 3243311 3243318 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTATTGG TERM 3468 3243318 - 3243336 + T 100 -16 -2.95779 | opp_overlap 3243318, overlap 3243317 3243315 3243311 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTATTGG YPO2901 3244406 - 3243384 - | hypothetical protein YPO2902 3245071 - 3244397 - | hypothetical protein TERM 3469 3244789 - 3244775 - G 72 -10 -3.36073 | overlap 3244773 TATATCGGTGAAATA GTGCTG CCC CAGCAC ATTAGCCATCACTTC TERM 3470 3246485 - 3246512 + G 79 -12.8 -3.03781 | opp_overlap 3246486, overlap 3246482 TATGTTTTGCAATCA ACTGAATCAGCG CCGC CGCTGATTCAGA TATCATTTCCGTTAA TERM 3471 3246511 - 3246486 - g 100 -16.3 -3.33815 | opp_overlap 3246485 3246482 ATGTTTTGCAATCAA CTGAATCAGCG CCGC CGCTGATTCAG ATATCATTTCCGTTA YPO2903 3245213 - 3246574 + | stationary phase inducible protein CsiE hcaT 3247728 - 3246571 - | putative 3-phenylpropionic acid transporter TERM 3472 3248043 - 3248059 + r 72 -6.5 -4.3534 | opp_overlap 3248044, overlap 3248044 TGTCAGCAATTTGAA ACCACCA TTA TGGTGGG TTTTCATGGTTAGGA TERM 3473 3248058 - 3248044 - R 80 -10 -3.67976 | opp_overlap 3248043 3248044 GTCAGCAATTTGAAA CCACCA TTA TGGTGG GTTTTCATGGTTAGG TERM 3474 3248044 - 3248058 + r 74 -10 -3.20722 | opp_overlap 3248044, overlap 3248043 GTCAGCAATTTGAAA CCACCA TTA TGGTGG GTTTTCATGGTTAGG ail 3248628 - 3248080 - | attachment invasion locus protein YPO2906 3248959 - 3248738 - | hypothetical protein TERM 3475 3249058 - 3249037 - R 95 -11.5 -3.86202 | CCCGATGAGATCAAA GCCCCGGCC AGGA GGCCAGGAC GGTGACAGCCGCCTT glyA 3250325 - 3249072 - | serine hydroxymethyltransferase TERM 3476 3250711 - 3250723 + H 80 -6.3 -4.87626 | overlap 3250720 AGAATTATCCTCATA TTCAC TAT GTGAA TTTTTCATCTTCAGC hmp 3250866 - 3252056 + | nitric oxide dioxygenase TERM 3477 3252093 - 3252120 + T 80 -9.9 -3.695 | overlap 3252094 CTACGCACTTAATGC CGCTGATCAGG AAGGTA CCTGATCAGCA TTTCGGCTATTTCAA TERM 3478 3252094 - 3252119 + T 93 -13.4 -2.81218 | overlap 3252093 TACGCACTTAATGCC GCTGATCAGG AAGGTA CCTGATCAGC ATTTCGGCTATTTCA TERM 3479 3253550 - 3253525 - T 91 -6.2 -5.50499 | gap 1, opp_overlap 3253525 TTATATGTAAAAAAA CCCGCATCGTT TTGGC AACGA-ACGGG CTTTTGTTATTCAGC glnB 3253927 - 3253589 - | nitrogen regulatory protein P-II 1 nadE 3255564 - 3253942 - | NAD synthetase YPO2914 3257061 - 3255724 - | two-component system response regulator TERM 3480 3256077 - 3256066 - GR 74 -7.2 -4.19371 | GAAACTGCGAACAAA CGGC TTAT GCCG CTTAGCCGACTCCCG YPO2915 3258019 - 3257024 - | hypothetical protein TERM 3481 3258005 - 3257989 - GR 89 -7.3 -5.00884 | ACGCTCCCCAAAAAA TCCCTCT GCC AGAGAGA CCGGTCTGTTTCACG YPO2916 3259546 - 3258095 - | two-component system sensor kinase TERM 3482 3259678 - 3259646 - R 100 -11.3 -5.00196 | opp_overlap 3259653, overlap 3259652 3259653 GTTGAAATAACAAAA TAAATATCCTCCGGC ATA GCCGGAGGTTTTTCA TATGCGCCTATAAGG TERM 3483 3259672 - 3259652 - R 100 -12.5 -4.06214 | opp_overlap 3259653, overlap 3259646 3259653 ATAACAAAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 3484 3259653 - 3259671 + r 100 -16 -4.8048 | opp_overlap 3259652 3259646 3259653 TAACAAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 3485 3259671 - 3259653 - R 100 -16 -3.01288 | opp_overlap 3259653, overlap 3259652 3259646 TAACAAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC tnp 3260210 - 3259752 - | transposase for the IS1541 insertion element TERM 3486 3260323 - 3260341 + H 100 -16 -4.36914 | opp_overlap 3260323 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 3487 3260341 - 3260323 - H 100 -16 -3.07307 | opp_overlap 3260323 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 3488 3260361 - 3260382 + H 100 -8.1 -5.43866 | gap 1, opp_overlap 3260361 CTGGGCACAAAAAAA GCAC-TTGCT GCG AGCAAAGTGC TTTTTTTAAAGGTTG TERM 3489 3260382 - 3260361 - H 100 -8.1 -5.60993 | gap 1, opp_overlap 3260361 CTGGGCACAAAAAAA GCAC-TTGCT GCG AGCAAAGTGC TTTTTTTAAAGGTTG TERM 3490 3260569 - 3260536 - H 80 -9.8 -3.617 | gap 2, opp_overlap 3260536, overlap 3260534 3260544 3260556 ATAGACAACTAAACA TTGATCAACGGGGCAA TAAA TTGCCCCGTTG--CAA GAATATGTGGATGCC TERM 3491 3260563 - 3260544 - H 100 -13.6 -3.23638 | opp_overlap 3260536, overlap 3260536 3260534 3260556 CTAAACATTGATCAA CGGGGCAA TAAA TTGCCCCG TTGCAAGAATATGTG YPO2918 3261437 - 3261997 + | hypothetical protein TERM 3492 3262280 - 3262266 - f 73 -8.6 -3.68222 | TTTTAAGGTCAACAA CAAGTC AGT GACTTG GATGACAACGGTTAT YPO2919 3262320 - 3262898 + | hypothetical protein TERM 3493 3262974 - 3262946 - T 70 -2.6 -4.98352 | gap 1, overlap 3262953 ATTAAATAAAATAAA CTATATACCCAAA ATAA TTTGAGT-TACAG AAAGGCAACAAGGGA TERM 3494 3263110 - 3263088 - T 90 -11.4 -3.60597 | overlap 3263086 3263091 ATAAATTGATAAAGA GAAGGGTATC TTC AATACCCTTC AGACTGCTGACAAAC TERM 3495 3263107 - 3263091 - T 72 -7.3 -3.91369 | overlap 3263088 3263086 AATTGATAAAGAGAA GGGTATC TTC AATACCC TTCAGACTGCTGACA TERM 3496 3263197 - 3263171 - T 84 -10.1 -3.82218 | gap 1, opp_overlap 3263180, overlap 3263172 3263187 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 3497 3263198 - 3263172 - T 72 -10.1 -2.88849 | gap 1, opp_overlap 3263180, overlap 3263171 3263187 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT purL 3267200 - 3263310 - | phosphoribosylformylglycinamidine synthase TERM 3498 3264253 - 3264266 + g 72 -8.1 -3.95073 | opp_overlap 3264253 3264252, overlap 3264252 TCTGCCCACCACAAG CGCAG AGTG CTGCG TTTCTCGCTGTACAC TERM 3499 3265214 - 3265255 + g 73 -2.9 -5.0538 | gap 1, opp_overlap 3265219 TCTGATCACGGGTGA CCATACCGGTTACCGTGCGG TCG CCG-ATGGTGATCAGGAAGG TTTTTTCCGCTACCG TERM 3500 3265911 - 3265922 + g 76 -5.8 -4.60487 | overlap 3265904 CAATTTGGCCCCCAC GGTG ATTT CACC TTTTTGCACATGATC TERM 3501 3268912 - 3268896 - g 100 -6.5 -5.69068 | overlap 3268907 GAAAAAGAGAAAAAA GCGGC TCAACAT GCCGC CATTGAGGCGGAGCT YPO2922 3267516 - 3268976 + | putative transglycosylase TERM 3502 3269069 - 3269039 - T 79 -11 -3.18912 | overlap 3269040 TGATTTAGTCACCAA CCGCCGCCCGTCAT AAC ATGCTGGGCGGCGC ATCACCTGGCCACCG TERM 3503 3269068 - 3269040 - T 100 -14.5 -2.51133 | overlap 3269039 GATTTAGTCACCAAC CGCCGCCCGTCAT AAC ATGCTGGGCGGCG CATCACCTGGCCACC YPO2923 3269564 - 3269085 - | tRNA-specific adenosine deaminase yfhB 3270405 - 3269758 - | hypothetical protein murQ 3271567 - 3270680 - | N-acetylmuramic acid-6-phosphate etherase YPO2926 3271775 - 3272614 + | putative DNA-binding transcriptional regulator fdx 3272776 - 3273036 + | putative [4Fe-4S] ferredoxin TERM 3504 3273114 - 3273090 - T 88 -9.9 -4.21974 | opp_overlap 3273093, overlap 3273092 3273093 CCAGTATGCAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCATATGCGCCTAT TERM 3505 3273112 - 3273092 - T 100 -12.5 -3.70709 | opp_overlap 3273093, overlap 3273090 3273093 AGTATGCAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 3506 3273093 - 3273111 + T 100 -16 -4.8048 | opp_overlap 3273092 3273090 3273093 GTATGCAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 3507 3273111 - 3273093 - T 100 -16 -2.81702 | opp_overlap 3273093, overlap 3273092 3273090 GTATGCAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC tnp 3273650 - 3273192 - | transposase for the IS1541 insertion element TERM 3508 3273763 - 3273781 + r 100 -16 -4.36914 | opp_overlap 3273763 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 3509 3273781 - 3273763 - R 100 -16 -3.07307 | opp_overlap 3273763 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 3510 3273823 - 3273799 - R 78 -5.8 -4.82901 | gap 1, opp_overlap 3273799 TTCTGGGCACAAAAA GGGATG-GCAT TTCC ATACCCATCCC TTAAATTTTCGGCTA acpS 3274232 - 3273852 - | 4'-phosphopantetheinyl transferase pdxJ 3274963 - 3274232 - | pyridoxal phosphate biosynthetic protein PdxJ YPO2931 3275935 - 3275153 - | transposase/IS protein TERM 3511 3275851 - 3275865 + g 77 -11.4 -3.3506 | overlap 3275864 CTGCCTGTTGTGACA GCGCAG GCG CTGCGC TTATAAGGCTTTCCA y1093 3276954 - 3275932 - | transposase for insertion sequence IS100 TERM 3512 3276976 - 3276958 - R 100 -13.2 -4.01078 | AAAAGTGACCATAAA CTCTCCTG AAT CAGGAGAG CAGATTACCCCCTGG TERM 3513 3277609 - 3277593 - R 88 -9.4 -4.25104 | CTGCTTCTATCAAAA GGAGGC ATTGA GCCTCC AAGGTTCAAATCACT YPO2934 3278982 - 3277633 - | hypothetical protein TERM 3514 3277722 - 3277738 + g 82 -3.6 -5.31456 | overlap 3277723 CAGCATTGGAAACTT TGTCCC AGAAG GGGCCA TTTTTTATCAATTCA YPO2935 3279546 - 3278986 - | hypothetical protein TERM 3515 3279751 - 3279773 + r 75 -9.1 -3.72893 | opp_overlap 3279751 CACTTATTAAGAAAA CCTGCCACC CCAAA GGTGGCAAG TTTGATAGCGACATG TERM 3516 3279773 - 3279751 - R 100 -12 -4.72497 | opp_overlap 3279751 CACTTATTAAGAAAA CCTGCCACCC CAA AGGTGGCAAG TTTGATAGCGACATG YPO2937 3280284 - 3279799 - | hypothetical protein TERM 3517 3280131 - 3280121 - G 76 -5.4 -4.8622 | TGTGCGAAGCAAAAA TCTG AAA CAGA GGCTTTACCTGAACC YPO2938 3282112 - 3280610 - | hypothetical protein TERM 3518 3281828 - 3281842 + g 70 -8.6 -3.75024 | CCCACGCCATGCGCT TTCCAG AGA CTGGAA TTCTTGGTGGTGCAA YPO2939 3282660 - 3282136 - | hypothetical protein YPO2940 3283319 - 3282765 - | fimbrial protein TERM 3519 3283870 - 3283860 - H 79 -8.2 -4.15565 | TTGATGATGGCAAAA GGCG CAT CGCC AAGTCGTGGGCCCGC TERM 3520 3285755 - 3285776 + G 77 -10.1 -3.74693 | TTTATTATCGAGTTC GGTGACCGC CTGA GCGATCACC TTTAATACGGTGGCA y1062 3284573 - 3285781 + | transposase for the IS285 insertion element TERM 3521 3286316 - 3286329 + T 72 -8.1 -3.78312 | CAGTTCAAAGGCTCC CGGTG TGAC CACCG TTTCATAAATAATTT YPO2944 3288260 - 3287481 - | putative pili chaperone protein TERM 3522 3288288 - 3288337 + r 73 -10.1 -2.98493 | gap 1, opp_overlap 3288291 3288295, overlap 3288285 3288291 GCAGACTTATCTTTA TAACAGACTTGCTACCGCAGCG TTTTATC CGCCTCGGCAGCAAG-CTGTTA TGCTTTACTGCTGCG TERM 3523 3288334 - 3288291 - R 89 -11.8 -3.31461 | gap 1, opp_overlap 3288288 3288285 3288291, overlap 3288295 GACTTATCTTTATAA CAGACTTGCTACCGCAGCG TTTTATC CGCCTCGGCAGCAAG-CTG TTATGCTTTACTGCT TERM 3524 3288331 - 3288295 - R 93 -12.3 -3.17622 | opp_overlap 3288291 3288288 3288285, overlap 3288291 TATCTTTATAACAGA CTTGCTACCGCAGCG TTTTATC CGCCTCGGCAGCAAG CTGTTATGCTTTACT YPO2945 3288944 - 3288399 - | frimbrial protein TERM 3525 3288988 - 3289019 + r 84 -3.8 -5.52096 | opp_overlap 3288988 GATTTATTAAATATA TAGTTAATATTCGC TCAT GCCAATACTAGCTA TTTTTTATTGCCTTT clpB5 3291820 - 3289145 - | Clp ATPase TERM 3526 3290407 - 3290419 + g 70 -9.1 -3.54424 | overlap 3290413 3290416 TCAACTGCTCAGTAC GCGCA TCC TGCGC TTTACCAAAGTGCCG YPO2947 3292603 - 3294483 + | hypothetical protein TERM 3527 3294672 - 3294627 - g 74 -7.5 -4.26076 | gap 1 CCAGCGCCAGGAAAA GCGC-CCTTGCCTGAACAGGAA GCC TTCCGCATCGGGCAAAGTGCGC ACATGACGTTCTCTC YPO2948 3294483 - 3295508 + | hypothetical protein TERM 3528 3296354 - 3296334 - g 70 -9.7 -3.29511 | TTGATGCCGCGATAA CCCCGATAG CGC CTATCGTGG TGCCGATCCCAGAAG YPO2949 3295607 - 3296788 + | hypothetical protein TERM 3529 3297002 - 3296990 - g 76 -5.5 -4.85599 | CCTATCCTAGAAAAA GTGGC ACA ACCAC AAGGTTTGGCAGTAA TERM 3530 3297126 - 3297108 - g 70 -9.6 -3.23853 | overlap 3297106 TTTTTGCAACGAATA TCGATGGC ATT GCCATCAA ACCTGCATGGAATAA YPO2950 3296795 - 3297826 + | putative fimbrial protein TERM 3531 3298875 - 3298862 - g 89 -2.4 -5.75342 | opp_overlap 3298862 GCGGGTGAAAAAAAA GTGA GTTTCT TCAC TGATCTTCCCACATC TERM 3532 3298945 - 3298935 - g 100 -5.4 -5.7946 | GTGTGAATAAAAAAA CACT AAA AGTG GAAAAGAAAGAGGTG YPO2951 3297866 - 3299203 + | hypothetical protein YPO2952 3299200 - 3299883 + | hypothetical protein TERM 3533 3299975 - 3299989 + G 76 -7.2 -4.34912 | opp_overlap 3299974 ATTTTAAGGGAAATG CGTTAT GGA ATAACG TTATTTTCATTACTT TERM 3534 3300771 - 3300753 - g 85 -3.8 -5.40072 | overlap 3300755 CTGGCTGGAAAAAAA GTTTGGCA TCA TACCAAGC TTAGCCTCAACCTTG YPO2953 3299884 - 3301566 + | hypothetical protein YPO2954 3301563 - 3302045 + | hypothetical protein TERM 3535 3302059 - 3302096 + T 83 -12.2 -2.73994 | opp_overlap 3302062, overlap 3302056 AATTTTTGAGCGATA TCACGTCATGCTAAAT AACCCG ACTTAGCATGACGTGG TCGTATTGGAAGAAT TERM 3536 3302093 - 3302062 - T 88 -12.5 -2.64616 | opp_overlap 3302059 3302056 TTTTGAGCGATATCA CGTCATGCTAAAT AACCCG ACTTAGCATGACG TGGTCGTATTGGAAG YPO2955 3303005 - 3302403 - | putative luxR-family regulatory protein TERM 3537 3304250 - 3304222 - R 100 -11.7 -4.65078 | opp_overlap 3304222 ATATCGTTAAGAAAA GAGGGCGGCATAA CCC TAATGCAGCCCTC TTTTTCATGCTATTG TERM 3538 3304222 - 3304250 + r 100 -11.7 -4.8083 | opp_overlap 3304222 ATATCGTTAAGAAAA GAGGGCGGCATAA CCC TAATGCAGCCCTC TTTTTCATGCTATTG mltB 3305372 - 3304260 - | murein hydrolase B TERM 3539 3305262 - 3305245 - G 80 -3.3 -5.26875 | opp_overlap 3305247, overlap 3305246 3305247 GGCTCAAGCAAAAAA CCGCCCT GAAC AGGGCTA TCTGACGGGGTTGCA TERM 3540 3306185 - 3306148 - g 79 -11.3 -3.54543 | gap 1, overlap 3306138 3306160 ATGGACCTGGCGAAA CCAGAGTGGAAAGGCCGC TGG GCAGC-TTCCCCCTCCGG TGCTGACTTCCAGGC sfuA 3305683 - 3306702 + | iron(III)-binding periplasmic protein TERM 3541 3306715 - 3306729 + F 71 -8.5 -3.53091 | TAATCCGTTTTACTC CGCCC CCTGC GGGCG TTTAACAAACCGAGT TERM 3542 3307106 - 3307116 + G 74 -6.8 -4.386 | GCAATAGCACCACTG GCAG TAC CTGC TTTTGTACAAAGTTA TERM 3543 3307164 - 3307178 + G 73 -3.4 -4.99035 | overlap 3307165 TCCCCTCAATGAATG GGCTGG CCG CCGGCG TTTTTATCTCGGTGA TERM 3544 3307477 - 3307492 + G 72 -8.2 -3.90464 | CGCCGCTAACATGCT GGCGGG AGTA CTCGCC TTATGTTGTTTGGGG TERM 3545 3308125 - 3308137 + G 70 -9.1 -3.50737 | overlap 3308121 TGCTCCCGGCGCCGC TGCGG GTG CCGCA TTAGTCTTTCTGGCT sfuB 3306758 - 3308344 + | iron(III)-transport system permease sfuC 3308341 - 3309390 + | iron(III)-transport ATP-binding protein YPO2961 3309987 - 3309463 - | hypothetical protein TERM 3546 3310275 - 3310250 - H 79 -10.7 -3.00986 | overlap 3310247 AACCACATTAAATTA TGTTTTGTTTT AAAA AAAACAAAACA CTCACCATTATAATT YPO2962 3310448 - 3310933 + | hypothetical protein TERM 3547 3310942 - 3310961 + T 85 -9.3 -4.11346 | GTATTAATTTATTCG GGGATGG CCTACA CCATCCC TTATTATTTACGTGT YPO2963 3312011 - 3311163 - | hypothetical protein TERM 3548 3314235 - 3314225 - g 86 -3.2 -5.63012 | AAAAATAAAGAAAAA CTGG ATA CCAA TATTAAGTTTCTCTG TERM 3549 3314311 - 3314335 + G 74 -4.3 -4.75288 | TAAAACCAATACTAT TTTGCAAGATG AGT CATTGTGCGAA TTTATTTTGGTCTGG dmsA 3312842 - 3315268 + | putative dimethyl sulfoxide reductase chain A protein dmsB 3315280 - 3315897 + | putative dimethyl sulfoxide reductase chain B protein dmsC 3315899 - 3316675 + | putative dimethyl sulfoxide reductase chain C protein TERM 3550 3316711 - 3316730 + F 77 -6.4 -4.60487 | overlap 3316714 TTCCATGTGGTGATT TACCCGCT GATT AGCGGCTA TTTTTGCGGCTAATC YPO2968 3317088 - 3317753 + | hypothetical protein YPO2969 3317750 - 3318319 + | putative iron-sulphur protein TERM 3551 3318357 - 3318370 + T 71 -6.7 -4.13767 | ACTGCACCTTATTCA GTTGG GTAT CCAAC TTTTGGGGTGCAGCC YPO2970 3319221 - 3318565 - | putative lipoprotein TERM 3552 3318960 - 3318970 + g 73 -3.2 -4.93288 | overlap 3318969 TAATATCACCCGCGT TGGT CAT GCCA TTTTGTTTAAATGTT YPO2971 3319574 - 3319218 - | putative lipoprotein YPO2972 3320272 - 3319601 - | putative lipoprotein YPO2973 3320862 - 3321293 + | hypothetical protein YPO2974 3321912 - 3321388 - | putative B-type cytochrome YPO2975 3323392 - 3322157 - | aminotransferase TERM 3553 3322852 - 3322821 - G 100 -7.4 -5.40474 | gap 1, opp_overlap 3322826 ACTCGCTCAAAAAAA TCCAACTCAACA-CA TTG CGCTGTTGGGTTGGA TGGAAAACCGAGGAT TERM 3554 3322951 - 3322926 - G 87 -4.7 -5.40474 | AGCTCGCCAAAAAAA TCAATGCCTTC GGTC AACGGCACTGA ACGCACTTGCGCACC TERM 3555 3323437 - 3323455 + H 70 -7.4 -3.88787 | overlap 3323439 3323454 ACCGTCCGAGCGACG CTGACCAT CAG ATGGTCTG TTTATGAACATATCC TERM 3556 3323439 - 3323453 + H 71 -8.6 -3.53174 | overlap 3323437 CGTCCGAGCGACGCT GACCAT CAG ATGGTC TGTTTATGAACATAT TERM 3557 3323902 - 3323892 - g 73 -3.2 -4.91429 | AAAGCGCAAATAAAA CAAC GCG GCTG TTGTGCCATTCTCGG TERM 3558 3324184 - 3324158 - g 70 -9.4 -3.59293 | opp_overlap 3324158, overlap 3324154 GCAAACCGAAAGCAA CGGTAAGCAACA TTT TGATGCTAACCG TGTCGTCACCTATGC TERM 3559 3324873 - 3324863 - g 70 -3.2 -4.77438 | AGCCACCATCAAAAA CCTC ACT GAGA TAGGTAAACAGCAGT YPO2976 3323658 - 3324905 + | hypothetical protein TERM 3560 3324921 - 3324951 + T 84 -9.8 -3.78934 | opp_overlap 3324923 CCTTCTTCCGCATCA TATCTGCCGGAA CTTATCC TCCCGGCAGATA TTCTTCTACGCCCAC TERM 3561 3324949 - 3324923 - T 75 -10.2 -2.78384 | opp_overlap 3324921 TTCTTCCGCATCATA TCTGCCGGAA CTTATCC TCCCGGCAGA TATTCTTCTACGCCC glk 3325954 - 3324983 - | glucokinase TERM 3562 3325430 - 3325444 + g 71 -7.8 -3.98981 | opp_overlap 3325429 CTCCTGGCGCAATAC GGCCAG AAT CTGGTC TTCTTCTTCACTATT YPO2978 3326662 - 3326135 - | hypothetical protein TERM 3563 3327536 - 3327525 - g 100 -7.2 -5.40072 | overlap 3327527 TTTGGTCGAAAAAAA GCCC ACCG GGGC CTGCTGGCTATTGGC YPO2979 3326714 - 3327592 + | putative lysR-family transcriptional regulatory protein YPO2980 3327728 - 3328717 + | putative ion channel protein YPO2981 3328888 - 3329301 + | hypothetical protein TERM 3564 3329337 - 3329327 - T 71 -6.8 -4.16016 | opp_overlap 3329328 TCATCGCTCAATAAA GCCT GTC AGGC GGGTTTTCATGGAAT mntH 3330623 - 3329394 - | manganese transport protein MntH TERM 3565 3329855 - 3329845 - G 82 -8.2 -4.56914 | overlap 3329846 CCATTGAAATGAAAA GCCG CAG CGGC GGTTGCCATCATCGC TERM 3566 3330708 - 3330722 + H 90 -5.8 -5.5112 | ATCAAGCGCATTTGT GATAAT GGA ATTATC TTTTTTGTTAGTAGA cru 3331058 - 3332242 + | nucleoside permease TERM 3567 3332268 - 3332281 + F 84 -3.7 -5.4492 | opp_overlap 3332268 ACGATCGCTTAACGA GGCGC TACG GCACC TTTTTTGTATCTATA gltX 3333476 - 3334891 + | glutamyl-tRNA synthetase TERM 3568 3334916 - 3334934 + F 100 -12.4 -5.24129 | TTTTCCGTGTTATCA GGCGGCCA CTC TGGTCGCC TTTTTTGTGCCCAGA TERM 3569 3334971 - 3334953 - f 100 -16 -4.36914 | opp_overlap 3334953 TTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC TERM 3570 3334953 - 3334971 + F 100 -16 -3.07307 | opp_overlap 3334953 TTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC tnp 3335084 - 3335542 + | transposase for the IS1541 insertion element TERM 3571 3335616 - 3335648 + F 95 -11.3 -3.86252 | opp_overlap 3335623, overlap 3335620 3335622 3335623 CCTTATAGGCGCATA TGAAAAACCTCCGGC TAT GCCGGAGGATATTTA TTATATTTGATAACA TERM 3572 3335620 - 3335644 + F 100 -9.9 -4.53047 | opp_overlap 3335623, overlap 3335616 3335622 3335623 ATAGGCGCATATGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTATATTTGAT TERM 3573 3335622 - 3335642 + F 100 -12.5 -3.85554 | opp_overlap 3335623, overlap 3335620 3335616 3335623 AGGCGCATATGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTATATTTG TERM 3574 3335623 - 3335641 + F 100 -16 -2.89706 | opp_overlap 3335623, overlap 3335622 3335620 3335616 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTATATTT TERM 3575 3335641 - 3335623 - f 100 -16 -4.8048 | opp_overlap 3335623 3335622 3335620 3335616 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTATATTT TERM 3576 3336067 - 3336095 + F 100 -14.7 -3.16068 | opp_overlap 3336072 3336074, overlap 3336074 AGCTCCACCACCCTT TAAAAGACCGGCC TTT GGCCGGTTTTTTG CTTTTCAGTTCCGAC TERM 3577 3336090 - 3336072 - f 91 -10.2 -4.10161 | opp_overlap 3336067 3336074, overlap 3336074 CACCACCCTTTAAAA GACCGGCC TTT GGCCGGTT TTTTGCTTTTCAGTT TERM 3578 3336088 - 3336074 - f 100 -12.8 -3.64716 | opp_overlap 3336067 3336074, overlap 3336072 CCACCCTTTAAAAGA CCGGCC TTT GGCCGG TTTTTTGCTTTTCAG TERM 3579 3336074 - 3336088 + F 100 -12.8 -5.46698 | opp_overlap 3336074 3336072, overlap 3336067 CCACCCTTTAAAAGA CCGGCC TTT GGCCGG TTTTTTGCTTTTCAG TERM 3580 3336354 - 3336365 + G 73 -5.8 -4.44245 | opp_overlap 3336345, overlap 3336352 3336351 ATTAAACCAGTGGTG CCTG GCGG CAGG TTTTGTCCGTAATCT YPO2986 3336256 - 3336861 + | hypothetical protein TERM 3581 3337181 - 3337170 - g 70 -2.2 -5.03945 | GAAGAATTACAAAAA CAGC AGCA ACTG ATTGAGACCCAAATT YPO2987 3336993 - 3337340 + | hypothetical protein YPO2988 3337656 - 3337441 - | hypothetical protein ligA 3339688 - 3337676 - | NAD-dependent DNA ligase LigA TERM 3582 3338904 - 3338886 - G 70 -2.4 -4.91511 | opp_overlap 3338899 ATTTGACGATAAAAA GCAATAAC CTG ATCACTGC CAGTGCAGAGTTTCA TERM 3583 3339196 - 3339169 - G 70 -3.2 -4.82901 | CTTGTGGCATAAAAA CCTCGCCACGGA CTTC TACGCGCCGCGG GACATTATCCCCATG TERM 3584 3339728 - 3339712 - R 100 -10.8 -5.5762 | opp_overlap 3339707 ACCAAAGATAAAAAA CCCCCG GCATG CGGGGG TTCGGGTTAATTCGA zipA 3340765 - 3339779 - | cell division protein ZipA TERM 3585 3340279 - 3340291 + g 70 -4.8 -4.59773 | overlap 3340269 GCTGTTGTGGAGCCA CCTG ATGTG CAGG TTTTTCCACATGCGG cysZ 3341014 - 3341748 + | putative sulfate transport protein CysZ TERM 3586 3341760 - 3341778 + F 100 -14.6 -3.97139 | ATGATCATTTTCGGT GGGCGTGT CTA ACACGCCC TTGTTATTGGGATTA TERM 3587 3342114 - 3342096 - g 84 -13.2 -3.41073 | overlap 3342094 GACCGCAGGCAAAGA GCTGGTTG AAC CAACCAGC GGGAATACAGGTGTT cysK 3341905 - 3342873 + | cysteine synthase A TERM 3588 3342928 - 3342893 - f 100 -16.4 -3.74693 | opp_overlap 3342903 3342908, overlap 3342903 GGCTACCGCACTAAA TGCAAAAAAAGCACCC TTTG GGGTGCTTTTTTTGTA GAGTACATCAAAGTT TERM 3589 3342918 - 3342903 - f 100 -10.4 -5.58209 | opp_overlap 3342903 3342908, overlap 3342893 CTAAATGCAAAAAAA GCACCC TTTG GGGTGC TTTTTTTGTAGAGTA TERM 3590 3342903 - 3342918 + F 100 -10.4 -5.626 | opp_overlap 3342893 3342903, overlap 3342908 CTAAATGCAAAAAAA GCACCC TTTG GGGTGC TTTTTTTGTAGAGTA ptsH 3343372 - 3343629 + | phosphohistidinoprotein-hexose phosphotransferase component of PTS system (Hpr) TERM 3591 3344744 - 3344733 - g 81 -5.8 -5.00196 | GCCGAAAGAAGAAAA CCCA TTCC TGGG CTGGCGTGCTATTCG TERM 3592 3345005 - 3345026 + G 70 -10.3 -3.01712 | opp_overlap 3345010, overlap 3345010 TCGCTCGCCATTTAG CTAAAGAAG TTGA CTTCTTTAG TATTGGGACAAACGA ptsI 3343678 - 3345405 + | phosphoenolpyruvate-protein phosphotransferase TERM 3593 3345536 - 3345502 - g 82 -3.5 -5.34555 | opp_overlap 3345504 TCAGATGATAAAAAA GACAGCAGTGTTATT GAGAT AGTTGCACCGCTGTC TGGTGAAATCGTCAA crr 3345454 - 3345963 + | glucose-specific PTS system component TERM 3594 3346028 - 3346004 - T 93 -9.9 -4.34488 | opp_overlap 3346007, overlap 3346006 3346007 GATACCGATAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCATATGCGCCTAT TERM 3595 3346026 - 3346006 - T 100 -12.5 -3.76888 | opp_overlap 3346007, overlap 3346004 3346007 TACCGATAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 3596 3346025 - 3346007 - T 100 -16 -2.8541 | opp_overlap 3346007, overlap 3346006 3346004 ACCGATAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 3597 3346007 - 3346025 + T 100 -16 -4.8048 | opp_overlap 3346006 3346004 3346007 ACCGATAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC tnp 3346564 - 3346106 - | transposase for the IS1541 insertion element TERM 3598 3346695 - 3346677 - R 100 -16 -3.07307 | opp_overlap 3346677 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 3599 3346677 - 3346695 + r 100 -16 -4.36914 | opp_overlap 3346677 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 3600 3346715 - 3346732 + r 100 -10.5 -4.25104 | opp_overlap 3346715 CTGGGCACAAAAAAA CGGCGCT CAAG GGCGCCG TTTTGCTGCCGGCCA TERM 3601 3346732 - 3346715 - R 100 -9.8 -5.60993 | opp_overlap 3346715 CTGGGCACAAAAAAA CGGCGC TCAAGG GCGCCG TTTTGCTGCCGGCCA YPO2997 3348183 - 3346834 - | putative two-component system sensor kinase TERM 3602 3347900 - 3347946 + g 100 -10.3 -5.27923 | opp_overlap 3347900 3347935 3347937, overlap 3347902 GAGAGAGCCGATATA TCTTTTTCTGCCGTATCTGCC ATCTC GGCAGGTAAGACAGAAAAATA TTTTTTGTCCGCTTC TERM 3603 3347946 - 3347900 - G 73 -11 -2.91239 | opp_overlap 3347900 3347902, overlap 3347935 3347937 GAGAGAGCCGATATA TCTTTTTCTGCCGTATCTGCCA TCT CGGCAGGTAAGACAGAAAAATA TTTTTTGTCCGCTTC TERM 3604 3347902 - 3347944 + g 100 -12.9 -4.26475 | opp_overlap 3347900 3347935 3347937, overlap 3347900 GAGAGCCGATATATC TTTTTCTGCCGTATCTGCC ATCTC GGCAGGTAAGACAGAAAAA TATTTTTTGTCCGCT YPO2998 3348892 - 3348209 - | putative two-component system response regulator TERM 3605 3348650 - 3348684 + g 83 -2.7 -5.41746 | CCGATCAATATTGTC GCCTTTAGCCGTTAA CATAA TGATCGGCAAACGGC TTTTTTTACGCACTT YPO2999 3349080 - 3350285 + | putative HlyD family secretion protein YPO3000 3350289 - 3352325 + | putative ABC transporter, ATP-binding protein TERM 3606 3352369 - 3352382 + T 86 -6.7 -4.9645 | GCTTTCATCGTGATA GGTCA TCCG TGACC TTTTATTGTTATCAT TERM 3607 3352547 - 3352560 + T 74 -4.5 -4.83615 | AACGCGAATTATTTT GGGTA TAGA TGCCC TTTTTATACAAAATA YPO3001 3354226 - 3352580 - | putative pyridine nucleotide-disulphide oxidoreductase TERM 3608 3353326 - 3353298 - G 71 -11 -2.81584 | gap 1, opp_overlap 3353316, overlap 3353297 ATATCAGCCAATAAT CT-GCCTTGCCGG TTAG CCGGCCAGGCCAG TGGAATATACGTTGC YPO3002 3355746 - 3354286 - | putative permease TERM 3609 3354850 - 3354833 - G 71 -5.5 -4.45117 | opp_overlap 3354834, overlap 3354834 GATATTTCAAATAAA GCCAGGT CAAC ATCTGGC CCGGTTAAGTCAGGG TERM 3610 3355560 - 3355528 - G 70 -9.1 -3.50393 | overlap 3355530 GGTGAGCGTATATAA TATGGCTGGGCCTTT TCC ATAAGCCCAGCCACT GCCCCCCAAGAATGT TERM 3611 3355558 - 3355530 - G 83 -13.9 -3.32698 | overlap 3355528 TGAGCGTATATAATA TGGCTGGGCCTTT TCC ATAAGCCCAGCCA CTGCCCCCCAAGAAT YPO3003 3355940 - 3355743 - | hypothetical protein YPO3006 3358517 - 3357336 - | putative aminotransferase YPO3007 3359114 - 3360643 + | hypothetical protein TERM 3612 3360728 - 3360754 + F 72 -10.1 -2.88849 | gap 1, opp_overlap 3360717, overlap 3360723 3360729 ACATCCATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCTCTGCC TERM 3613 3360729 - 3360755 + F 84 -10.1 -3.82218 | gap 1, opp_overlap 3360717, overlap 3360723 3360728 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCTCTGCCT TERM 3614 3360833 - 3360858 + F 93 -11.9 -3.66378 | overlap 3360834 ATAAAAGTTCATTTA TGCTGAGTCAG TACG CTGGCTCAGCG TTTACATGGGATATG TERM 3615 3360834 - 3360857 + F 91 -13.2 -2.79505 | overlap 3360833 TAAAAGTTCATTTAT GCTGAGTCAG TACG CTGGCTCAGC GTTTACATGGGATAT YPO3008 3360876 - 3362420 + | putative two-component sensor histidine kinase YPO3009 3362417 - 3363124 + | putative two-component response regulator YPO3010 3364737 - 3363505 - | hypothetical protein cysM 3365860 - 3364982 - | cysteine synthase B cysA 3367122 - 3366031 - | sulfate/thiosulfate transporter subunit TERM 3616 3366441 - 3366431 - G 74 -2.4 -5.10163 | AATTCCAAAACAAAA CGGG TTG CCGG TTCACGCCAGACTTC cysW 3367987 - 3367112 - | sulfate/thiosulfate transporter permease subunit TERM 3617 3367756 - 3367744 - G 70 -4.8 -4.63527 | GCACCACCCCAAAAA CCAG GTTCA CTGG CACGGTTATCAATGC cysT 3368820 - 3367987 - | sulfate/thiosulfate transporter subunit TERM 3618 3368086 - 3368044 - G 91 -12.6 -3.96618 | GTTAATGCTAAACAA CAGCGCCAGTGACACGGCCA GAA TCACCGAGGCAATGGCGCTG GCTGCCGGGTAATCA cysP 3369857 - 3368820 - | thiosulfate transporter subunit TERM 3619 3370124 - 3370103 - R 100 -12.3 -6.32017 | gap 1 AACAAATAAAAAAAA GCCCGGT-CG TCG CGCACCGGGC AAGAAAAACAGTTTA nanT 3371704 - 3370172 - | putative sialic acid transporter TERM 3620 3371501 - 3371485 - G 74 -8 -3.99405 | TGAAGGCAGCAGAAA TCAGGC TGGTC GCCTGA ATCAGTGTCAGGCCA TERM 3621 3371889 - 3371877 - R 76 -7.7 -4.23615 | opp_overlap 3371876 3371877 ATGACATTCAATAAA GGAGT AAA ACTCC ATTTGAGTGTATAAG YPO3017 3373187 - 3372309 - | putative rpiR-family transcriptional regulatory protein TERM 3622 3372765 - 3372749 - G 72 -3.7 -4.88228 | overlap 3372751 3372755 3372756 AGCCAACACCAAAAA TACAGAT GCG ATCCGCA GGGCGCAGCACTTTG YPO3018 3373336 - 3373184 - | hypothetical protein TERM 3623 3373324 - 3373311 - G 100 -9.5 -5.85737 | AGATCAATAAAAAAA CCCGG AAAA CCGGG TAAAAAGGTCAAAAA YPO3019 3373831 - 3373376 - | hypothetical protein YPO3020 3374800 - 3373928 - | N-acetylmannosamine kinase TERM 3624 3375217 - 3375191 - H 70 -3.6 -4.89521 | opp_overlap 3375191, overlap 3375192 AGAGTGGAAAGAAAA TGCAGTTCCC GGAGAAG GGGAACAGCG TGGTATTGCCGTAGA YPO3023 3376403 - 3377104 + | N-acetylmannosamine-6-phosphate 2-epimerase nanA 3377167 - 3378060 + | probable N-acetylneuraminate lyase TERM 3625 3378120 - 3378098 - T 100 -13.5 -4.18044 | TGATAAATAATGAAA GGCCGGATT TCATC AATCCGGCC AACGGTGATATATTT YPO3025 3379057 - 3378158 - | hypothetical protein TERM 3626 3378204 - 3378214 + g 70 -8.2 -3.72576 | GCAAAATAATAGCTG CCGG TAA CCGG TTTGCTAAAACGCAG TERM 3627 3379146 - 3379123 - R 74 -6.8 -4.39386 | CTGAAACGATTAAAA TTACCTTGCG ACAA CGCAAAATAA AGCGGGAAGAGAGAG TERM 3628 3379204 - 3379188 - R 76 -9.4 -3.4758 | TAGGAATAATATTAA GGCGCT GAGGT AGCGCC CAAGTGATAATAGCA yfeY 3379846 - 3379235 - | hypothetical protein ygiW 3380205 - 3380618 + | hypothetical protein TERM 3629 3382804 - 3382816 + G 75 -9.1 -3.96216 | ATAGTTATAGCTTGG GTGCC TAC GGCAC TTATTTCGATAACAG YPO3028 3381105 - 3383384 + | putative autotransporter TERM 3630 3383402 - 3383429 + T 100 -14.2 -5.53991 | opp_overlap 3383401 AACATACCAGATGAG TGGTTTCCCGCG ATAA TGCGGGAGACCA TTTTTTTGCTCAATA YPO3029 3383892 - 3383476 - | hypothetical protein YPO3030 3383998 - 3384183 + | hypothetical protein YPO3031 3384790 - 3384365 - | putative acetyltransferase TERM 3631 3385514 - 3385496 - g 70 -8.9 -3.61715 | TACGGCTTTGAAGAA GATGCCA TTCAT TGGCATC AGGTAGCGCATAGCC TERM 3632 3385607 - 3385633 + G 73 -2.8 -5.04385 | overlap 3385606 TATATTAAACATCGC CAGGAAGCCCGT GGT ATTGGCGGCCTG TTTTTTGACGATCTG TERM 3633 3385929 - 3385909 - g 77 -9.7 -3.65812 | GCGCTGGGAATATAA CTATCAGCC AGA GGCAGATAG TGCAGAAGCCGCGTT hemF 3385073 - 3386002 + | coproporphyrinogen III oxidase TERM 3634 3386218 - 3386205 - g 91 -5.3 -5.40072 | GCGGGTGGAAAAAAA TGATC TGGT GATCA CCGCAGATATCCCAC YPO3033 3386002 - 3386460 + | hypothetical protein maeB 3388896 - 3386611 - | malic enzyme TERM 3635 3388038 - 3388070 + g 71 -7 -4.13728 | gap 1, opp_overlap 3388051, overlap 3388068 CCGGTTCCGGGTTTG CCAGGGC-CAGAATC AACG GATTCGGTGCCATGG TTTTCACCATCTCTG TERM 3636 3388798 - 3388815 + g 84 -11.3 -3.90112 | opp_overlap 3388797 3388796, overlap 3388803 CGCCAGTGCCAAATC CCGTTGG GTCG CCAACGG TTTGGTTGGCGAAAC YPO3035 3389688 - 3389092 - | hypothetical protein TERM 3637 3389770 - 3389798 + r 77 -10.2 -3.22774 | opp_overlap 3389770 CTGCTGCAGTAAAAA CGCCCTGCCGAC GCAAA GTCCACAGGGCG TTAATCATCACTCTC TERM 3638 3389798 - 3389770 - R 100 -12.4 -4.72272 | opp_overlap 3389770 CTGCTGCAGTAAAAA CGCCCTGCCGAC GCAAA GTCCACAGGGCG TTAATCATCACTCTC napC 3390474 - 3389872 - | cytochrome C-type protein NapC TERM 3639 3390523 - 3390511 - R 78 -9.1 -3.76224 | CGGTTACTGACCAAA GCCAG GTG CTGGC TGGAAGCTATTACCA napB 3390966 - 3390499 - | diheme cytochrome c550 TERM 3640 3390754 - 3390786 + g 80 -2 -5.38549 | overlap 3390725 3390755 GCTATGTGGGATCAT CGG-TGGCTGGTTAAC ATA GTTCAGC-GCCATCCG TTTTTGTTGTTTAGG napA 3393541 - 3391049 - | nitrate reductase napD 3393804 - 3393538 - | assembly protein for periplasmic nitrate reductase napF 3394297 - 3393794 - | ferredoxin-type protein NapF TERM 3641 3394093 - 3394082 - G 71 -5.8 -4.38154 | overlap 3394047 ACAGGCCTGACAAAA GCTG CACT CAGC ACGTTGAAAATCTAT TERM 3642 3394596 - 3394629 + H 73 -2.6 -5.11613 | opp_overlap 3394599, overlap 3394627 TTCATTTAACGGGAA TAATTACCAAAACA AGACGA TGCTTTGATAATTA TTTTTTAGATAATCT TERM 3643 3394964 - 3394929 - H 80 -9 -3.9578 | ACATACGCTAAATAA TTCGAGTGGCAGGAAG ACAG CCCCCTGCAACTTGAA GTATGACGGGTATAG narP 3395130 - 3395759 + | nitrate/nitrite response regulator protein NarP TERM 3644 3395774 - 3395754 - T 86 -2.6 -5.79595 | opp_overlap 3395754 3395757, overlap 3395757 TTGGAAAATAAAAAA TACTGACA TCCGT TGTCACTA TTTAATGGCCGCTAA YPO3042 3396050 - 3395772 - | hypothetical protein TERM 3645 3397206 - 3397191 - g 70 -9 -3.5511 | overlap 3397189 TCCCAGCTACAAACA CCCGAA GAGT TTCGGG AAATTACGCTACGGG YPO3043 3396465 - 3399596 + | aminoglycoside/multidrug efflux system TERM 3646 3399656 - 3399681 + F 76 -7.6 -4.20783 | AGTCGGTTCTCCCCT GCGGCATG ACGAAAAAAC CATGCCGC TTTATTGCATCAGAT YPO3044 3399827 - 3400411 + | hypothetical protein TERM 3647 3400462 - 3400481 + F 74 -7.8 -4.01564 | overlap 3400463 3400465 CGCGCAATACTCACC CTAGGGCG TCCC CGCCCTAC TTTCTGGCTATTTTA TERM 3648 3400463 - 3400480 + F 83 -11.3 -2.99854 | overlap 3400462 3400465 GCGCAATACTCACCC TAGGGCG TCCC CGCCCTA CTTTCTGGCTATTTT TERM 3649 3400465 - 3400478 + F 71 -9.5 -3.0386 | overlap 3400463 3400462 GCAATACTCACCCTA GGGCG TCCC CGCCC TACTTTCTGGCTATT ybcI 3400700 - 3401248 + | hypothetical protein TERM 3650 3401436 - 3401414 - T 87 -4.7 -5.4505 | opp_overlap 3401414 GCGGGTAATAAAAAA GGCAGTGCC TCTAC GGTTCTGCC TTTTTGCGAGGATTC TERM 3651 3401414 - 3401436 + T 79 -6.9 -4.58283 | opp_overlap 3401414 GCGGGTAATAAAAAA GGCAGTGCC TCTAC GGTTCTGCC TTTTTGCGAGGATTC YPO3046 3403177 - 3402002 - | putative sulfatase modifier protein TERM 3652 3402167 - 3402153 - G 71 -5 -4.57073 | overlap 3402155 TACCCTGCGCAAAAA TAGGAT TTC ATCCCA TCGCTGTCCTGATCA TERM 3653 3402787 - 3402814 + g 70 -9.2 -3.54543 | ATCCTTTGCCTGAGC GAGTCACACGGT AGCG ATCGTGTAACTC TTTAGGGCCATCAAT TERM 3654 3403201 - 3403225 + r 73 -8.5 -3.58305 | opp_overlap 3403201 3403203 3403217 3403218, overlap 3403220 TCATGGAGATAGACA GACGGCAAGAA AAA TACTTGCCGCC TTTGGCGGCTTAATT TERM 3655 3403225 - 3403201 - R 79 -10.7 -3.05993 | opp_overlap 3403201 3403220, overlap 3403203 3403217 3403218 TCATGGAGATAGACA GACGGCAAGAA AAA TACTTGCCGCC TTTGGCGGCTTAATT TERM 3656 3403223 - 3403203 - R 74 -9.7 -3.08465 | opp_overlap 3403201 3403220, overlap 3403201 3403217 3403218 ATGGAGATAGACAGA CGGCAAGAA AAA TACTTGCCG CCTTTGGCGGCTTAA TERM 3657 3403220 - 3403234 + r 100 -12.8 -3.39895 | opp_overlap 3403203 3403201 3403218 3403217, overlap 3403201 GCAAGAAAAATACTT GCCGCC TTT GGCGGC TTAATTCATACCAAG ydeN 3404908 - 3403235 - | putative sulfatase TERM 3658 3405162 - 3405151 - R 71 -2.2 -5.10497 | AAGCCACTGAAAAAA CACA ATGA TGCG ATATTAAACGGTGAG YPO3048 3406456 - 3405386 - | probable ABC-transporter, ATP-binding protein YPO3049 3408218 - 3406449 - | putative binding protein-dependent transport system, inner-membrane component TERM 3659 3408071 - 3408057 - G 74 -2.1 -5.1471 | ATCAGAAAAAATAAA CCTGA ACGCA TCAAG ACTCAGTACCTTTGA TERM 3660 3408301 - 3408270 - R 81 -9.4 -3.75517 | gap 1, overlap 3408271 AGCCGATAAAACCAA GGACTGCGCATGCCC ATA AGGCAAGCGCA-CCC AGATAAAGCCACTAT TERM 3661 3408301 - 3408271 - R 70 -9.6 -2.84587 | overlap 3408270 GCCGATAAAACCAAG GACTGCGCATGCCC ATA AGGCAAGCGCACCC AGATAAAGCCACTAT YPO3050 3409401 - 3408313 - | hypothetical protein TERM 3662 3408496 - 3408513 + g 71 -7.7 -4.03234 | opp_overlap 3408485 AATATCTGACTGATT GGCCAGA ATAT TTTGGCC TTTCTCTGAGAGCAG TERM 3663 3408981 - 3408997 + g 73 -5.1 -4.74706 | opp_overlap 3408983 CAACGGGTTCGTAAG TAGAGCC GTA GGCTTTG TTTTTCCATATTGCC TERM 3664 3409690 - 3409674 - H 71 -9.5 -2.96184 | overlap 3409673 3409676 CAGCAAAATCTAAAG CAGCAAA CAG TTTGCTG ATAAGCCACGGTGTG YPO3051 3409685 - 3410185 + | hypothetical protein YPO3052 3410345 - 3410743 + | hypothetical protein TERM 3665 3411111 - 3411122 + G 71 -7.2 -3.9712 | opp_overlap 3411111 CACCCTGACCACAAA GGCC GCCT GGCC TTTATGATAACCTCC TERM 3666 3411122 - 3411111 - g 71 -7.2 -3.96624 | opp_overlap 3411111 CACCCTGACCACAAA GGCC GCCT GGCC TTTATGATAACCTCC dapE 3410745 - 3411872 + | succinyl-diaminopimelate desuccinylase TERM 3667 3411948 - 3411972 + G 71 -7.9 -4.08767 | gap 1 TAAGTGGCGCTCATC GCCTACAGCC ACAGGC GGCTG-AGGC TTTTCAAGCAATGCA YPO3054 3411869 - 3412546 + | putative carboxypeptidase YPO3055 3412614 - 3412808 + | hypothetical protein YPO3056 3415112 - 3413013 - | putative acetyltransferase TERM 3668 3413739 - 3413765 + g 73 -10.8 -3.29043 | overlap 3413740 3413742 CAGCGTTGGTGCCTG CCACTGCCCGCT ATG AGCGGCCAGTGA TTGTGCCACCAGATT TERM 3669 3413740 - 3413764 + g 81 -14.3 -2.57211 | overlap 3413739 3413742 AGCGTTGGTGCCTGC CACTGCCCGCT ATG AGCGGCCAGTG ATTGTGCCACCAGAT TERM 3670 3413742 - 3413762 + g 71 -11.1 -2.82623 | overlap 3413740 3413739 CGTTGGTGCCTGCCA CTGCCCGCT ATG AGCGGCCAG TGATTGTGCCACCAG TERM 3671 3414223 - 3414211 - G 76 -3.3 -5.16237 | overlap 3414212 AATTTCAGTAAAAAA CCACG CCC CGTGC CCTCATATCCCTGTA yeaL 3415566 - 3415114 - | hypothetical protein YPO3058 3416526 - 3415660 - | hypothetical protein TERM 3672 3416144 - 3416131 - G 76 -5.9 -4.63218 | TGCCGGGCAATAAAA CGGCC CCAT GACCG ACTGACCGGTACCAC purC 3417458 - 3416745 - | phosphoribosylaminoimidazole-succinocarboxamide synthase TERM 3673 3417528 - 3417504 - R 100 -9.9 -4.49556 | opp_overlap 3417507, overlap 3417506 3417507 TCGTCATGAAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCATATGCGCCTAT TERM 3674 3417526 - 3417506 - R 100 -12.5 -3.85603 | opp_overlap 3417507, overlap 3417504 3417507 GTCATGAAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 3675 3417507 - 3417525 + r 100 -16 -4.8048 | opp_overlap 3417506 3417504 3417507 TCATGAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 3676 3417525 - 3417507 - R 100 -16 -2.90639 | opp_overlap 3417507, overlap 3417506 3417504 TCATGAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC tnp 3418064 - 3417606 - | transposase for the IS1541 insertion element TERM 3677 3418177 - 3418195 + r 100 -16 -4.37092 | opp_overlap 3418177 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAT TERM 3678 3418195 - 3418177 - R 100 -16 -3.07307 | opp_overlap 3418177 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAT TERM 3679 3418213 - 3418236 + r 100 -13.2 -5.18371 | opp_overlap 3418213 3418218 TTCTGGGCACAATAA CTAAAGGGGC CGAA GCCCCTTTGG TTTTATTTTATCGCG TERM 3680 3418236 - 3418213 - R 88 -11 -3.78934 | opp_overlap 3418213, overlap 3418218 TTCTGGGCACAATAA CTAAAGGGGC CGAA GCCCCTTTGG TTTTATTTTATCGCG TERM 3681 3418231 - 3418218 - R 85 -9.5 -4.11664 | opp_overlap 3418213, overlap 3418213 GGCACAATAACTAAA GGGGC CGAA GCCCC TTTGGTTTTATTTTA dapX 3419297 - 3418239 - | lipoprotein TERM 3682 3418628 - 3418661 + g 82 -10.9 -3.86822 | GCGTACCGACTTTAC GTGAGGCCTGACTGC TCTC GCTGTCAGCCCGCAC TTTATCCAAACCTTC dapA 3420196 - 3419315 - | dihydrodipicolinate synthase TERM 3683 3420296 - 3420307 + H 93 -2.2 -6.15717 | ACTGTGTTGTAAGCG CTTG GCAG CAGG TTTTTTTTATGTTTA TERM 3684 3420493 - 3420507 + G 71 -6.4 -4.36554 | CGGCTGGCTATGTTC GGTGAG GAG TTCACC TTTATTATGCTGCTG gcvR 3420361 - 3420930 + | glycine cleavage system transcriptional repressor bcp 3420930 - 3421403 + | thioredoxin-dependent thiol peroxidase TERM 3685 3421460 - 3421445 - T 100 -10.4 -4.34711 | opp_overlap 3421447 AAAATTAACGGAAAA GAGCGC TCTG GCGCTC TTGAGGTTATTGACA YPO3065 3422066 - 3421647 - | hypothetical protein YPO3066 3422765 - 3422070 - | hypothetical protein YPO3067 3423103 - 3423276 + | hypothetical protein perM 3424429 - 3423365 - | hypothetical protein TERM 3686 3423856 - 3423843 - G 74 -9.5 -3.53091 | ACCTGCCCGGCCAAA CCGCG GTTA CGCGG CAAAACACGGCGCAC TERM 3687 3424234 - 3424213 - G 70 -8.7 -3.63897 | overlap 3424211 CAAATAGCACAAATA CGATACTGG CCGC CCAGGATCG TGAACAACCAATACG YPO3069 3424784 - 3426244 + | hypothetical protein yfgD 3426351 - 3426707 + | putative arsenate reductase YPO3071 3427638 - 3426919 - | DNA replication initiation factor TERM 3688 3427736 - 3427712 - R 88 -9.9 -4.15788 | opp_overlap 3427715, overlap 3427714 3427715 AATTTGGTGAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCATATGCGCCTAT TERM 3689 3427734 - 3427714 - R 100 -12.5 -3.6761 | opp_overlap 3427715, overlap 3427712 3427715 TTTGGTGAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 3690 3427715 - 3427733 + r 100 -16 -4.8048 | opp_overlap 3427715 3427714 3427712 TTGGTGAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 3691 3427733 - 3427715 - R 100 -16 -2.80244 | opp_overlap 3427715, overlap 3427714 3427712 TTGGTGAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC tnp 3428272 - 3427814 - | transposase for the IS1541 insertion element TERM 3692 3428385 - 3428403 + r 100 -16 -4.36914 | opp_overlap 3428385 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 3693 3428403 - 3428385 - R 100 -16 -3.07307 | opp_overlap 3428385 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 3694 3428453 - 3428423 - R 100 -11.3 -5.60993 | gap 1, opp_overlap 3428423 3428425, overlap 3428425 CTGGGCACAAAAAAA TCGCGGTTACTGGT AAAC ACCAG-AACCGCAA TTTTTTTAGTACTAT TERM 3695 3428423 - 3428453 + r 100 -9.1 -5.56568 | gap 1, opp_overlap 3428423 3428425, overlap 3428425 CTGGGCACAAAAAAA TCGCGGTTACTGGT AAAC ACCAG-AACCGCAA TTTTTTTAGTACTAT TERM 3696 3428425 - 3428451 + r 83 -11.7 -2.94304 | gap 1, opp_overlap 3428423 3428425, overlap 3428423 GGGCACAAAAAAATC GCGGTTACTGGT AAAC ACCAG-AACCGC AATTTTTTTAGTACT TERM 3697 3428451 - 3428425 - R 83 -11.7 -2.96801 | gap 1, opp_overlap 3428425 3428423, overlap 3428423 GGGCACAAAAAAATC GCGGTTACTGGT AAAC ACCAG-AACCGC AATTTTTTTAGTACT cysS 3430004 - 3428619 - | cysteinyl-tRNA synthetase TERM 3698 3429031 - 3429043 + g 70 -10.5 -2.87931 | GCGTTAGCATCAGTA CCGCG CAG CGCGG TATATAAACGCTCCA TERM 3699 3429066 - 3429052 - G 71 -7.8 -4.03413 | AGCGCGGTATATAAA CGCTCC AGT GAAGCG CGTGCCTGCTTCAGA ppiB 3430215 - 3430709 + | peptidyl-prolyl cis-trans isomerase B (rotamase B) TERM 3700 3430765 - 3430781 + G 86 -9.4 -4.5538 | opp_overlap 3430765, overlap 3430759 CTCAGCGTTCAGGAA CCGGCA ATCAC TGCCGG TTTTCTGCATTTTAT TERM 3701 3430921 - 3430940 + G 71 -6.4 -4.36914 | opp_overlap 3430924, overlap 3430924 CTGAAATCACTCCAA CAACAGGG GGTG CCCTGTTA TTTTATCCACGGGAA TERM 3702 3430924 - 3430937 + G 79 -8.1 -4.30995 | opp_overlap 3430924, overlap 3430921 AAATCACTCCAACAA CAGGG GGTG CCCTG TTATTTTATCCACGG TERM 3703 3430937 - 3430924 - g 70 -8.1 -3.67134 | opp_overlap 3430924 3430921 AAATCACTCCAACAA CAGGG GGTG CCCTG TTATTTTATCCACGG YPO3075 3430720 - 3431442 + | UDP-2,3-diacylglucosamine hydrolase purE 3431738 - 3432262 + | phosphoribosylaminoimidazole carboxylase catalytic subunit PurE purK 3432259 - 3433323 + | phosphoribosylaminoimidazole carboxylase ATPase subunit TERM 3704 3433354 - 3433330 - T 86 -9.9 -4.04491 | overlap 3433327 AAGTTATAACAAGAA GCGGGCGGC CTCTGCT GCTGCCCGC GAATAAAATCCACTA ybbP 3435796 - 3433367 - | putative permease TERM 3705 3435229 - 3435246 + g 76 -7.7 -4.38712 | gap 1 AAGTCAAACGGCTAC CCGGTTGC ACC GCA-CCGG TTTTCTCGACATCAG TERM 3706 3435574 - 3435551 - G 73 -10.2 -3.24422 | opp_overlap 3435568, overlap 3435549 3435548 CATGGTCAAAAATGA GAGTTGGCGG CTAA CCGCCAGCCC CTGCTGCTTCGCTTC ybbA 3436479 - 3435793 - | putative ABC transporter ATP-binding protein YbbA tesA 3436447 - 3437085 + | multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1 TERM 3707 3437179 - 3437150 - fH 86 -5.7 -5.26316 | gap 1, opp_overlap 3437150, overlap 3437156 3437157 TCAGGCTAGAAAAAA GGGA-AAGCGCACT AAA AGTGCGGTAATCCC TTCGCTTACCAATCA TERM 3708 3437171 - 3437157 - fH 73 -10 -3.03344 | opp_overlap 3437150, overlap 3437156 3437150 AGAAAAAAGGGAAAG CGCACT AAA AGTGCG GTAATCCCTTCGCTT ybbO 3437472 - 3438248 + | short chain dehydrogenase TERM 3709 3438377 - 3438410 + G 70 -3.2 -4.8048 | opp_overlap 3438373 ACCTGCACCAAGCCA TAGAACAATCCATG TCAGTT CCTGTGTTGTTCTA TTTTTGGTCTGAACG TERM 3710 3438510 - 3438540 + G 71 -7.7 -4.07647 | gap 2 TCTGGCCCGTGTCGA TTGCGATGCACAACC CAT GGT-G-GCGTCGCAA TTTGGTTTACGCTCT ybbN 3438325 - 3439194 + | putative thioredoxin TERM 3711 3439245 - 3439267 + F 100 -13.4 -4.52703 | overlap 3439264 TACCATCATTTGCTA CTGCGCGGGG CAA TCCTGCGCAG TTTTATGCTGCTTTC YPO3083 3439389 - 3440303 + | hypothetical protein ybbJ 3440306 - 3440755 + | hypothetical protein TERM 3712 3440850 - 3440805 - T 100 -13.5 -3.80114 | opp_overlap 3440812, overlap 3440796 3440809 3440811 3440812 CAGCAAGGCAGTAAA CAAACAGCCCGAATCACTTAC TCTG GTAGGTGATTCGGGTTATTTA TCACGGCAGCGTATT TERM 3713 3440846 - 3440809 - T 100 -12.1 -4.5123 | opp_overlap 3440812, overlap 3440796 3440805 3440811 3440812 AAGGCAGTAAACAAA CAGCCCGAATCACTTAC TCTG GTAGGTGATTCGGGTTA TTTATCACGGCAGCG TERM 3714 3440844 - 3440811 - T 100 -12.5 -3.85603 | opp_overlap 3440812, overlap 3440796 3440809 3440805 3440812 GGCAGTAAACAAACA GCCCGAATCACTTAC TCTG GTAGGTGATTCGGGT TATTTATCACGGCAG TERM 3715 3440812 - 3440843 + T 100 -18.2 -4.06419 | opp_overlap 3440796 3440812 3440811 3440809 3440805 GCAGTAAACAAACAG CCCGAATCACTTAC TCTG GTAGGTGATTCGGG TTATTTATCACGGCA TERM 3716 3440843 - 3440812 - T 100 -16 -2.90639 | opp_overlap 3440812, overlap 3440796 3440811 3440809 3440805 GCAGTAAACAAACAG CCCGAATCACTTAC TCTG GTAGGTGATTCGGG TTATTTATCACGGCA cueR 3441283 - 3440864 - | putative regulatory protein TERM 3717 3441145 - 3441114 - G 100 -13.8 -4.14739 | gap 1, opp_overlap 3441113 3441111 TCATCCAGTGTAAAA CCCAC-TTGCCGCGC CTG GCGCAGCAACGTGAG CTCTTCAATATGTTT TERM 3718 3441196 - 3441211 + g 100 -4.6 -6.13503 | opp_overlap 3441198, overlap 3441198 CGTTATCCGTGCGAA CAGGTG GCGT CACCAG TTTTTTTTCTTCATA TERM 3719 3441243 - 3441255 + g 91 -5.5 -5.40474 | AAACGAATGGCTTTG CTGGT TAA ACCGG TTTTTTTCGCAACAT TERM 3720 3441996 - 3441981 - g 71 -6.8 -4.15222 | opp_overlap 3441973, overlap 3441982 AGTTCCGGCAACAAA CGTGGC TTTA GCCACA AGTACGGTTTCTGAT TERM 3721 3442647 - 3442611 - g 90 -9.3 -4.59773 | overlap 3442612 3442613 GGTCAGCCTGAAAAA TGGCAGAGCGACCATGG ATA CCTTGGTCGCTCTGGGG ACAGGTGCGGCCTGG TERM 3722 3442646 - 3442612 - g 82 -12.8 -3.35542 | overlap 3442611 3442613 GTCAGCCTGAAAAAT GGCAGAGCGACCATGG ATA CCTTGGTCGCTCTGGG GACAGGTGCGGCCTG TERM 3723 3442645 - 3442613 - g 91 -16.3 -2.61004 | overlap 3442612 3442611 TCAGCCTGAAAAATG GCAGAGCGACCATGG ATA CCTTGGTCGCTCTGG GGACAGGTGCGGCCT TERM 3724 3443268 - 3443292 + G 75 -10.7 -3.45118 | overlap 3443270 ACCCCAGTTGGTCTA TACCCTGGTGG TGG CCACCACGGTG TTAATTATCGCCTGC TERM 3725 3443270 - 3443290 + G 76 -11.1 -3.29593 | overlap 3443268 CCCAGTTGGTCTATA CCCTGGTGG TGG CCACCACGG TGTTAATTATCGCCT ybaR 3441490 - 3444375 + | copper exporting ATPase TERM 3726 3444389 - 3444428 + F 100 -17.4 -3.2614 | gap 1, opp_overlap 3444378, overlap 3444389 AAATGCTTTCAGTGA C-CTCAATGGCGCACAATA TCG TTTTGTGCGCCATTGAGCG TTGATATCCAAAATG TERM 3727 3444389 - 3444427 + F 100 -17.6 -2.5547 | opp_overlap 3444378, overlap 3444389 AAATGCTTTCAGTGA CCTCAATGGCGCACAATA TCG TTTTGTGCGCCATTGAGC GTTGATATCCAAAAT YPO3087 3444896 - 3445705 + | hypothetical protein TERM 3728 3445732 - 3445711 - f 100 -10.9 -5.87996 | CAATCAATAAAAAAA TGGCCGATA TCAC TACCGGCCA GTCAAAGAGGAATTT YPO3088 3445969 - 3446448 + | hypothetical protein TERM 3729 3446529 - 3446515 - f 73 -7.2 -4.10437 | overlap 3446527 CTATGAAGGAAAGAA TGAGTT TAA AACTCA TCAGACTGCTGACAA TERM 3730 3446618 - 3446592 - f 84 -10.1 -3.82218 | gap 1, opp_overlap 3446601, overlap 3446593 3446608 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 3731 3446619 - 3446593 - f 72 -10.1 -2.88849 | gap 1, opp_overlap 3446601, overlap 3446592 3446608 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT YPO3089 3446740 - 3447024 + | hypothetical protein TERM 3732 3449857 - 3449872 + G 70 -2.6 -5.00196 | TCGGTACAAAGTGCC CAGATA CACC TATTTG TTTTCTTATTTGCGG fsr 3449065 - 3450279 + | putative membrane efflux protein TERM 3733 3451546 - 3451557 + G 82 -7.2 -4.68908 | opp_overlap 3451545 AGTTTGGCACAAATC GGCG AGTT CGCC TTTATTTTGGCTGGG rosB 3450514 - 3452205 + | putative cation:proton antiport protein TERM 3734 3452282 - 3452248 - T 100 -13.6 -5.06816 | opp_overlap 3452250 3452251, overlap 3452251 ACTCTGTAATAAAAA CAATCAGGGCCAGCTT ACT ATGCTGGCCCTGACTT ATATCCCGCGTCTAC TERM 3735 3452250 - 3452280 + T 100 -14 -3.49102 | opp_overlap 3452248 3452251, overlap 3452251 TCTGTAATAAAAACA ATCAGGGCCAGCTT ACT ATGCTGGCCCTGAC TTATATCCCGCGTCT TERM 3736 3452251 - 3452279 + T 100 -17.5 -2.6914 | opp_overlap 3452248 3452251, overlap 3452250 CTGTAATAAAAACAA TCAGGGCCAGCTT ACT ATGCTGGCCCTGA CTTATATCCCGCGTC TERM 3737 3452279 - 3452251 - T 100 -17.5 -4.63592 | opp_overlap 3452251 3452250, overlap 3452248 CTGTAATAAAAACAA TCAGGGCCAGCTT ACT ATGCTGGCCCTGA CTTATATCCCGCGTC gsk 3453606 - 3452302 - | inosine-guanosine kinase TERM 3738 3452750 - 3452739 - G 71 -7.2 -4.03413 | overlap 3452740 ATCCCGCCATATAAA GCCC GCTG GGGC CTGCGGTACATAACA TERM 3739 3453792 - 3453756 - R 74 -6.6 -4.39426 | gap 1, opp_overlap 3453761, overlap 3453761 TACAGGGTGATAAAA CAGAACGGCCAGATGAG AAAC CTCACCCAGCCGTTA-G ATAAATTCGTTTAAA TERM 3740 3453788 - 3453761 - R 100 -12 -4.02581 | opp_overlap 3453761, overlap 3453756 GGTGATAAAACAGAA CGGCCAGATGAG AAAC CTCACCCAGCCG TTAGATAAATTCGTT wzz 3454961 - 3453810 - | ferric enterobactin transport protein FepE manB 3456382 - 3455009 - | phosphomannomutase wbyL 3457130 - 3456387 - | probable glycosyltransferase TERM 3741 3456700 - 3456679 - G 76 -4.4 -4.96848 | overlap 3456682 CGTTTCATATAAAAA GTAGGATG GGGAGG CATCCAAC CATACTTCATTTTTT TERM 3742 3456797 - 3456812 + g 70 -4.7 -4.60924 | opp_overlap 3456797 GTAAGTCACCATATA CAGCA TCACAT TGCTG TTTTTCAAAGGTTTC manC 3458545 - 3457133 - | mannose-1-phosphate guanylyltransferase wbyK 3461854 - 3460841 - | putative mannosyltransferase TERM 3743 3462445 - 3462433 - R 77 -6.3 -4.67755 | ATAGTCAGGGAAAAA TGCAA GCA TTGCA GAATTATTCAGTGCG TERM 3744 3462959 - 3462941 - R 75 -6 -4.63863 | opp_overlap 3462945, overlap 3462945 GTAATAGAAAAAGAA TATAGCAC TGG GTGCTGTA ATAGAAAATATGGGA wbyJ 3464463 - 3463321 - | putative mannosyltransferase TERM 3745 3463383 - 3463373 - G 83 -5.4 -5.09762 | ATCGTAATATAAAAA GAAC CAG GTTC ATCATCAGTAATATA TERM 3746 3463468 - 3463480 + g 100 -4.9 -5.95286 | GGGGATTTTTAATTT TATAG CTT CTATA TTTTTTATTTTTACT wzx 3466910 - 3465567 - | putative O-unit flippase TERM 3747 3465729 - 3465691 - G 100 -15.7 -4.2535 | overlap 3465679 ACACCATATTTAAAA TGGACTGATAACATTAT GGATA ATAATATTATCAGTCCA CCAGAAAATAACGAT wbyH 3468267 - 3466984 - | hypothetical protein TERM 3748 3467140 - 3467192 + g 84 -2 -5.64006 | gap 1, opp_overlap 3467135 TACTACATTACCCCA TGGGAGACGCTTGTGATGCAAGAAA ACAA TATCTT-CATCATTTGCAACTCCCA TTTTTTTCATTGCAT prt 3469125 - 3468268 - | paratose synthase TERM 3749 3469151 - 3469136 - R 100 -9 -5.58454 | opp_overlap 3469135 3469136 3469138 TTCATATTAAAAAAA GAGGCA GTGT TGCCTC CTTGCTCCTGTTAAA ddhC 3470475 - 3469162 - | putative CDP-4-keto-6-deoxy-D-glucose-3-dehydratase TERM 3750 3471021 - 3470986 - R 75 -10.4 -2.81045 | gap 1, opp_overlap 3470983, overlap 3470983 3470981 CCACCGATAACATTA CCCGCAC-GCACTGTCG CTA CGGCAGTGCCATGCTGG CCATAGTTCGCTGGA ddhA 3472358 - 3471573 - | glucose-1-phosphate cytidylyltransferase TERM 3751 3472368 - 3472383 + r 72 -6.2 -4.25256 | CTCCATTACGTATTA CTTTGA TCTC TCAAAG TTATTTTGATGGCAC ddhD 3473373 - 3472384 - | CDP-6-deoxy-delta-3,4-glucoseen reductase TERM 3752 3472809 - 3472795 - G 85 -7.8 -4.90266 | opp_overlap 3472795 TTCACGAACGAAAAA GGTCCC TTG AGGACC TTCAATTCGTAAAAG TERM 3753 3473453 - 3473441 - R 80 -2.7 -5.53288 | CTTAAGTCAAAAAAA TTCAG TGA CTAAA ATAGAAACAAAAAAG hemH 3474933 - 3473971 - | ferrochelatase TERM 3754 3475007 - 3474977 - R 100 -17 -3.59979 | opp_overlap 3474984, overlap 3474996 3474997 CCTTCTTACTTGAAA TAGCTAAGGCGGCC TTA AACCGCCTTAGCTA TAAGGCCATCCAGAA adk 3475667 - 3475023 - | adenylate kinase TERM 3755 3475853 - 3475881 + r 100 -6.8 -5.66684 | gap 1, opp_overlap 3475853 AGGTACAATAAAAAA CACCCTTG-GCAA TACG TTGAACAAGGGTG TTTTTTTATCGATTA TERM 3756 3475881 - 3475853 - R 91 -6.8 -5.56673 | gap 1, opp_overlap 3475853 AGGTACAATAAAAAA CACCCTTG-GCAA TACG TTGAACAAGGGTG TTTTTTTATCGATTA htpG 3477768 - 3475894 - | heat shock protein 90 TERM 3757 3477570 - 3477539 - G 74 -9.6 -3.57792 | opp_overlap 3477537, overlap 3477566 TCACTCAGGGTTAAA GTACGTTTCTCTTT ATCA AAAGATAAACGCAC TCTCAGTTCGCCATC recR 3478565 - 3477960 - | recombination protein RecR TERM 3758 3478589 - 3478620 + r 73 -3.6 -4.98672 | CATCTTAAAGCCTGG TGGCAATTGCATCC CATT GGATACAGAGGCCA TTTTCTCTTTTTGCG YPO3121 3478897 - 3478565 - | hypothetical protein TERM 3759 3478824 - 3478836 + g 76 -3.4 -5.17353 | TTGGCGACTTCTTCC TGCA TCTGC TGCA TTTTTTCCTGCATCT dnaX 3480929 - 3478953 - | DNA polymerase III subunits gamma and tau TERM 3760 3479454 - 3479480 + g 79 -7.3 -4.46675 | overlap 3479444 TTGATTTTTCGCGGT CCAGCGATAAG CTTCT TTTTTCGCTGG TTTCTTCTCTTCCGT TERM 3761 3479557 - 3479598 + g 100 -10 -5.58179 | overlap 3479526 3479563 AAACGCTCCAGTGCT GAGTTTGCCGGCCGCGCT TTTCCT GGCGCCGCCGGCTCATTC TTTTTTGTTGTGGTC TERM 3762 3479563 - 3479592 + g 86 -14.2 -3.2756 | overlap 3479557 TCCAGTGCTGAGTTT GCCGGCCGCGCT TTTCCT GGCGCCGCCGGC TCATTCTTTTTTGTT TERM 3763 3481435 - 3481421 - R 75 -5.7 -4.58424 | TATGACGATATAAAA CCAGA GTTTG TCTGG CTGGAATACCTTAAC apt 3482148 - 3481585 - | adenine phosphoribosyltransferase TERM 3764 3483263 - 3483277 + H 86 -11.4 -3.3506 | overlap 3483276 CTGCCTGTTGTGACA GCGCAG GCG CTGCGC TTATAAGGCTTTCCA TERM 3765 3484386 - 3484368 - H 100 -13.2 -4.01078 | AAAAGTGACCATAAA CTCTCCTG AAT CAGGAGAG CAGATTACCCCCTGG TERM 3766 3484772 - 3484757 - H 76 -7.6 -4.15222 | opp_overlap 3484756 ACTTTCGTCAAGAAA GCGTTA TCAT TAACGC ATGTAGTGCCGACCA TERM 3767 3485333 - 3485319 - g 74 -7.8 -4.21343 | TCCAAGACAGAGAAA GCCAAC TGG GTCGGC AGAGTTTGTTAGTTG priC 3484925 - 3485461 + | primosomal replication protein n'' YPO3128 3485632 - 3485787 + | hypothetical protein aefA 3489546 - 3486127 - | potassium efflux protein KefA YPO3130 3490139 - 3489786 - | hypothetical protein acrR 3490808 - 3490152 - | DNA-binding transcriptional repressor AcrR TERM 3768 3490695 - 3490667 - G 77 -9.5 -3.74747 | overlap 3490670 TGAAGTGCCAGTAAA TAGCGCCTCGGGT TAC ACCCGCAGCGATA GCAATATCGGTAAGA TERM 3769 3490692 - 3490670 - G 70 -11.2 -2.66873 | overlap 3490667 AGTGCCAGTAAATAG CGCCTCGGGT TAC ACCCGCAGCG ATAGCAATATCGGTA TERM 3770 3490982 - 3490964 - g 78 -6 -4.77438 | ATCTATGAGCAAAAA CAGAGG GGTAATG CCTCTG GCTGCAATTCTGGTA acrA 3490953 - 3492140 + | multidrug efflux protein TERM 3771 3492283 - 3492244 - g 85 -12.3 -3.78775 | CTTGCGATCATGAAA TTACCAGTAGCGCAATA TCCGAC CATTGCGCCACCGGCAA TTACAATTGCCGCCA acrB 3492157 - 3495309 + | multidrug efflux protein TERM 3772 3495357 - 3495342 - f 100 -11.8 -3.83998 | opp_overlap 3495342 TCATTTCATACTAAA GGCCGC GCAA GCGGCC TTTTTATTGCTGAGC TERM 3773 3495342 - 3495357 + F 100 -11.8 -5.1356 | opp_overlap 3495342 TCATTTCATACTAAA GGCCGC GCAA GCGGCC TTTTTATTGCTGAGC rpmE2 3495495 - 3495755 + | 50S ribosomal protein L31 type B rpmJ 3495771 - 3495914 + | 50S ribosomal protein L36 TERM 3774 3496007 - 3496035 + F 88 -6.7 -5.24551 | gap 1, opp_overlap 3496007 CATCAGTCCCCAAAA GGCCCTTTGTGC ACTAAC GC-CAACGGGCC TTTTTATTCATTTGC TERM 3775 3496035 - 3496007 - f 73 -7.4 -4.10161 | gap 1, opp_overlap 3496007 CATCAGTCCCCAAAA GGCCCTTTGTGCA CTAA CGC-CAACGGGCC TTTTTATTCATTTGC TERM 3776 3496974 - 3496964 - g 76 -5.4 -4.8048 | overlap 3496948 3496949 TCTTGAGATTAAAAA TCTC AAA GAGA ACCAGTATTCAATGA TERM 3777 3496992 - 3497008 + G 70 -8.1 -3.71745 | opp_overlap 3496990, overlap 3496991 CAGTATTCAATGACT TACCAAT ATA ATTGGTA TATTTTCAATGCTTG YPO3136 3496788 - 3497141 + | hypothetical protein YPO3137 3497300 - 3497668 + | hypothetical protein ymoA 3497717 - 3497920 + | hemolysin expression-modulating protein TERM 3778 3498256 - 3498240 - f 76 -6.6 -4.46652 | TAAATAAAAATCAAA CCATTC GTTCA GAATGG GAGGAATCTTATTTT TERM 3779 3498326 - 3498315 - f 79 -3 -5.27335 | TGCCGGAAATAAAAA TCTA CTGA TAGA GAGCGTTCACGACAA YPO3139 3498652 - 3499197 + | putative 6-O-methylguanine DNA methyltransferase family protein ybaY 3499854 - 3499333 - | putative lipoprotein TERM 3780 3499689 - 3499703 + g 77 -11.4 -3.44146 | opp_overlap 3499685 3499683 GTTCACGAATATTCA CGGTCC CAT GGACCG TTGATTGTGCGACCG TERM 3781 3500275 - 3500259 - g 74 -6.5 -4.41616 | ATGCTGCGAAACAAA CCGTCCC CGC AGAACGG ACTGTTCACTCATTT tesB 3500111 - 3500971 + | acyl-CoA thioesterase II TERM 3782 3501022 - 3501067 + T 72 -7.5 -4.04089 | opp_overlap 3501027 3501029 3501032 3501034, overlap 3501030 3501032 CAGTTGATGAATCAA TGAAATAGCACAGGGGCGATG TCAC CATCGCCCCTGTAGTTCATCA TTATTATGTATTTTT TERM 3783 3501062 - 3501027 - T 100 -12.6 -4.01419 | opp_overlap 3501022 3501030 3501032, overlap 3501029 3501032 3501034 GATGAATCAATGAAA TAGCACAGGGGCGATG TCAC CATCGCCCCTGTAGTT CATCATTATTATGTA TERM 3784 3501060 - 3501029 - T 100 -15.2 -3.59031 | opp_overlap 3501022 3501030 3501032, overlap 3501027 3501032 3501034 TGAATCAATGAAATA GCACAGGGGCGATG TCAC CATCGCCCCTGTAG TTCATCATTATTATG TERM 3785 3501030 - 3501060 + T 100 -16.3 -3.34242 | gap 1, opp_overlap 3501029 3501027 3501032 3501034, overlap 3501022 3501032 GAATCAATGAAATAG C-ACAGGGGCGATG TCAC CATCGCCCCTGTAG TTCATCATTATTATG TERM 3786 3501057 - 3501032 - T 100 -19.1 -2.906 | opp_overlap 3501030 3501022 3501032, overlap 3501029 3501027 3501034 ATCAATGAAATAGCA CAGGGGCGATG TCAC CATCGCCCCTG TAGTTCATCATTATT TERM 3787 3501032 - 3501057 + T 100 -19.1 -2.8293 | opp_overlap 3501032 3501029 3501027 3501034, overlap 3501030 3501022 ATCAATGAAATAGCA CAGGGGCGATG TCAC CATCGCCCCTG TAGTTCATCATTATT TERM 3788 3501055 - 3501034 - T 100 -15.9 -2.9955 | opp_overlap 3501032 3501030 3501022, overlap 3501032 3501029 3501027 CAATGAAATAGCACA GGGGCGATG TCAC CATCGCCCC TGTAGTTCATCATTA amtB 3502526 - 3501231 - | ammonium transporter glnK 3502898 - 3502560 - | nitrogen regulatory protein P-II 2 TERM 3789 3502692 - 3502717 + g 74 -4.1 -5.00138 | gap 1 AATCACTTCGTCTAA TTGATCATCGGC GAT GGCGAT-ATCAA TTTTTACTTTGGGTA TERM 3790 3503299 - 3503278 - R 100 -13.7 -4.22554 | TGAGTCAATAAATAA CGTGGGGCG ACAT CACCCCACG CGTGCTGCTTAACTC mdlB 3505131 - 3503308 - | putative multidrug transporter membrane\ATP-binding components TERM 3791 3503542 - 3503557 + g 73 -3.2 -5.0538 | opp_overlap 3503544 3503545, overlap 3503544 AAGGCGATGAGCAAT AACCAC CAGC GTGGTA TTTTTTCGAATCACC mdlA 3506890 - 3505124 - | putative multidrug transporter membrane\ATP-binding components TERM 3792 3505336 - 3505349 + g 74 -2.3 -5.12707 | CGGTACGCTGTTCGC CCCAC TCGC GTAGG TTTTTTAAAATTTCA TERM 3793 3506278 - 3506297 + g 82 -12.2 -3.61398 | opp_overlap 3506274 TCATGCGAATACTGG TCAGGCTC TCTT GAGCCTGA TTATTAAGCAAAGAA YPO3146 3507453 - 3506992 - | probable AsnC-family regulatory protein TERM 3794 3507932 - 3507943 + G 73 -5.8 -4.43844 | opp_overlap 3507920, overlap 3507925 AATCACCTTCTACGG TGGC CGTT GCCA TTTTGTCGATCATGC YPO3147 3507579 - 3508619 + | putative Pyridoxal-phosphate dependent protein TERM 3795 3508779 - 3508743 - T 100 -10.3 -4.74013 | TTCAAAGAGATAAAA GCGGTTTGTCAGC TAGGCATGAAC ACTGACAAACCGC CTACGGAAGAAAAAA TERM 3796 3508811 - 3508796 - T 100 -6.1 -5.8187 | TACGGAAGAAAAAAA CCGGA TGGTTC TCCGG CTGGCTAATAGCTAT YPO3148 3509652 - 3508831 - | putative haloacid dehalogenase-like hydrolase TERM 3797 3510700 - 3510689 - g 71 -5.8 -4.29326 | GGTAAATTCAACAAA TGGC AGTT GCCA GCATCCGGTTCGCAT TERM 3798 3511267 - 3511249 - g 74 -2.4 -5.19212 | overlap 3511250 ACCAGCAGCAAAAAA CGCTGA CCTTCAT TCAGCA GATAGAAAGCGCGCC YPO3149 3509757 - 3511460 + | hypothetical protein YPO3150 3511725 - 3512423 + | queuosine biosynthesis protein QueC YPO3151 3512916 - 3512509 - | hypothetical protein TERM 3799 3513149 - 3513106 - R 83 -8.8 -4.08945 | gap 1, opp_overlap 3513137 3513138 ATTATGTTGGTAAAA GCCGCCAGACCAATACCTACC GAT GGCCAGCACC-GCCTGGCGGC TTGATTTACCAACTT ybaV 3513716 - 3513270 - | hypothetical protein TERM 3800 3513579 - 3513594 + g 74 -2.4 -5.07107 | overlap 3513565 3513581 AGCGCCGTTATCTGC GGCGCT ATTA GGCGAC TTTTTTGAGACTTTA TERM 3801 3513798 - 3513821 + r 100 -15.4 -4.68384 | opp_overlap 3513802, overlap 3513802 AGATCACAGATATGC GAAAGGTCGC CAAA GCGACCTTTC TTTTATTACATCGGT TERM 3802 3513817 - 3513802 - R 82 -10.4 -3.66139 | opp_overlap 3513798 3513802 CACAGATATGCGAAA GGTCGC CAAA GCGACC TTTCTTTTATTACAT TERM 3803 3513802 - 3513817 + r 100 -10.4 -4.88795 | opp_overlap 3513802, overlap 3513798 CACAGATATGCGAAA GGTCGC CAAA GCGACC TTTCTTTTATTACAT ppiD 3515742 - 3513856 - | peptidyl-prolyl cis-trans isomerase (rotamase D) TERM 3804 3514589 - 3514599 + g 74 -4.6 -4.81083 | opp_overlap 3514586 TGTAGCGCATAATAA GCGT CAA GCGC TTTTTCCTGCTTAAG TERM 3805 3515939 - 3515958 + r 70 -9.3 -2.81609 | opp_overlap 3515939, overlap 3515938 3515952 CTAAGCGAAAAAAAA GCGCATC ATAAAC GATGCGC CTTGTATCTTACCTT TERM 3806 3515958 - 3515939 - R 100 -10 -5.86332 | opp_overlap 3515939 3515938 3515952 CTAAGCGAAAAAAAA GCGCATCA TAAA CGATGCGC CTTGTATCTTACCTT hupB 3516315 - 3516043 - | transcriptional regulator HU subunit beta TERM 3807 3516499 - 3516472 - R 72 -6.3 -4.25873 | opp_overlap 3516472 GCGGCACAAAAAATA GCTGGCAAGCA GGATTT CACTTACCAGC ATTAGTTTTATCAAT lon 3518887 - 3516533 - | DNA-binding ATP-dependent protease La TERM 3808 3518435 - 3518445 + g 100 -5.4 -5.83226 | opp_overlap 3518427 CAGCGAAGCCAGCAC TTCC GGC GGAA TTTTTTTGTTCAGTT TERM 3809 3518944 - 3518930 - R 72 -10 -2.7752 | opp_overlap 3518930, overlap 3518929 CAGATTACTGGAAAT CTCGTG AAA CACGAG TCATCACGAGTTTCA TERM 3810 3519048 - 3519030 - R 100 -13.2 -4.91852 | opp_overlap 3519030 GCGAGGAAAAAGAAA TGGGGGAT AAA ATCCCCCA TTGTCATACTAACTG TERM 3811 3519030 - 3519048 + r 100 -13.2 -3.44527 | opp_overlap 3519030 GCGAGGAAAAAGAAA TGGGGGAT AAA ATCCCCCA TTGTCATACTAACTG clpX 3520353 - 3519082 - | ATP-dependent protease ATP-binding subunit clpP 3521182 - 3520559 - | ATP-dependent Clp protease proteolytic subunit TERM 3812 3521010 - 3520997 - G 76 -6.7 -4.56597 | opp_overlap 3520997 CTCGGCTTCCAAAAA CAGCA TCTG TGCTG TGATTAGGTTAGCCA TERM 3813 3521589 - 3521564 - R 100 -11.1 -5.50723 | opp_overlap 3521564 TTACCAAAAGAAAAA GCCCGTGACCA ATAA TGGCGACGGGC TTAATCAATCAAAAT TERM 3814 3521626 - 3521604 - R 95 -9.2 -4.4959 | overlap 3521606 CTTAATCAATCAAAA TACTGAATGG GTC CCATCCAGCA TCATGCGCTGAAAAA TERM 3815 3521624 - 3521606 - R 81 -9.6 -3.85043 | overlap 3521604 TAATCAATCAAAATA CTGAATGG GTC CCATCCAG CATCATGCGCTGAAA tig 3522948 - 3521644 - | trigger factor YPO3159 3523224 - 3523021 - | hypothetical protein TERM 3816 3523298 - 3523273 - R 91 -10.5 -4.12532 | opp_overlap 3523279, overlap 3523275 3523279 TCGCCTATACAGAAA CACAAACGGCC CTAG AGCCGTTTGTA AAATTCTCATCTACT TERM 3817 3523296 - 3523275 - R 84 -10.9 -3.65996 | opp_overlap 3523279, overlap 3523273 3523279 GCCTATACAGAAACA CAAACGGCC CTAG AGCCGTTTG TAAAATTCTCATCTA TERM 3818 3523292 - 3523279 - R 73 -5.9 -4.44187 | opp_overlap 3523279, overlap 3523275 3523273 ATACAGAAACACAAA CGGCC CTAG AGCCG TTTGTAAAATTCTCA bolA 3523685 - 3523365 - | transcriptional regulator BolA yajG 3524034 - 3524612 + | hypothetical protein TERM 3819 3524717 - 3524689 - f 73 -8.2 -3.65991 | gap 1, opp_overlap 3524687 AGTTGCTCAACAGAA TGCTCTGCC-CGA TACC TTGCGGCAGAGCA GGTAGATTTATTATG TERM 3820 3524936 - 3524954 + G 73 -5.9 -4.58395 | overlap 3524939 TTGGTCCCCGCTGAT GGACCGC TACAC GCCGTCC TTTTTAGGGCGTCGG TERM 3821 3525858 - 3525876 + G 73 -3 -4.91194 | overlap 3525860 GCCGGTTGGTTTGTA GAGGCC CATGGCT GGCCAC TTTTCTATTTATTCT ampG 3524730 - 3526208 + | muropeptide transporter TERM 3822 3526231 - 3526258 + F 86 -3.4 -5.59879 | CATAAGTGACATAAA GCCGGTGC TGTTCAGTTTGT GCACTGGC TTTTTTGTGTTTATC TERM 3823 3526346 - 3526360 + F 85 -2.1 -5.75342 | TAAATCACAACTTTT CATGT TTGTT GCATG TTTTTTTTAAAAAAA yfeN 3526500 - 3527267 + | hypothetical protein TERM 3824 3527314 - 3527279 - f 72 -7.1 -4.04295 | opp_overlap 3527279 3527280 3527282, overlap 3527282 CTAACTATAACTAAA TGATTCCGAGGTG-CCT ATTT AGGACACCTCGAAAT-A TATTTTAATTTACCT TERM 3825 3527282 - 3527312 + F 73 -9.1 -3.51998 | gap 1, opp_overlap 3527279 3527282, overlap 3527280 3527279 ACTATAACTAAATGA TTCCGAGGTG-CCT ATTT AGGACACCTCGAAA TATATTTTAATTTAC TERM 3826 3527312 - 3527282 - f 83 -11.3 -3.05266 | gap 1, opp_overlap 3527282 3527280 3527279, overlap 3527279 ACTATAACTAAATGA TTCCGAGGTG-CCT ATTT AGGACACCTCGAAA TATATTTTAATTTAC TERM 3827 3527509 - 3527494 - f 80 -9 -3.95674 | AAAATTGCCAAATAA GGTCAC ATCT GTGACC CCCTTAACATAAAGT TERM 3828 3528524 - 3528509 - g 74 -2.6 -5.09173 | gap 1, overlap 3528500 3528497 3528520 GAACATGCCAAAAAA TGGCCAT GAC AT-GCCA AAAGGCATGGATATG cyoA 3527637 - 3528593 + | cytochrome o ubiquinol oxidase subunit II TERM 3829 3529661 - 3529684 + G 71 -6 -4.32804 | TTGCCACGATGATCA TTTCCATCCC AACA GGGGTGAAAA TTTTCAATTGGTTGT cyoB 3528598 - 3530589 + | cytochrome O ubiquinol oxidase subunit I TERM 3830 3530642 - 3530602 - g 77 -12 -3.17714 | gap 2, overlap 3530608 3530612 TGAAACTCTGACTAA CCACAACGT-A-GCCCATGC AGA GCATGGGCATCACGATGCGG GAGCGACGAAAGTAT TERM 3831 3530636 - 3530608 - g 70 -9 -3.54029 | gap 2, overlap 3530602 3530612 TCTGACTAACCACAA CGT-A-GCCCATGC AGA GCATGGGCATCACG ATGCGGGAGCGACGA TERM 3832 3530630 - 3530612 - g 81 -14.6 -2.63614 | overlap 3530608 3530602 ACTAACCACAACGTA GCCCATGC AGA GCATGGGC ATCACGATGCGGGAG TERM 3833 3530880 - 3530867 - g 71 -6.7 -4.15854 | AAAGGGAGTGTAAAA CAGGT CAAT ACCTG GTTGGGCTTCACCTT cyoC 3530579 - 3531193 + | cytochrome o ubiquinol oxidase subunit III cyoD 3531193 - 3531525 + | cytochrome o ubiquinol oxidase subunit IV cyoE 3531536 - 3532426 + | protoheme IX farnesyltransferase TERM 3834 3532495 - 3532457 - f 100 -11 -4.48299 | opp_overlap 3532461, overlap 3532461 TGAGAGTGAAATAAA TCAAGTGGCTGGCAGGAA TCG CTCTTGCCAGCCACTTTG TATTTGTTCCCTGTT TERM 3835 3532491 - 3532461 - f 100 -16.2 -3.76486 | opp_overlap 3532461, overlap 3532457 AGTGAAATAAATCAA GTGGCTGGCAGGAA TCG CTCTTGCCAGCCAC TTTGTATTTGTTCCC TERM 3836 3532461 - 3532491 + F 100 -17.7 -4.46072 | opp_overlap 3532461 3532457 AGTGAAATAAATCAA GTGGCTGGCAGGA ATCGC TCTTGCCAGCCAC TTTGTATTTGTTCCC yajR 3532904 - 3534274 + | putative transporter TERM 3837 3534333 - 3534304 - T 71 -8.5 -3.44622 | opp_overlap 3534304 TAGGGCCAGAATTAA GGGGCAAAGACAT GAAA AAGCCGTTGCCCC TTTAGTCGTTATACC YPO3170 3534889 - 3534398 - | nucleotide-binding protein apbA 3535121 - 3536032 + | 2-dehydropantoate 2-reductase TERM 3838 3536565 - 3536536 - gT 76 -7.9 -4.19974 | gap 1, opp_overlap 3536537, overlap 3536537 AAAAGGCGGAAGAAA TTGCCTGGCAGCTA GTG TTGCCGCCAGG-AA TTTATAATTATCGGG TERM 3839 3536537 - 3536565 + GT 73 -7.3 -4.1021 | opp_overlap 3536536 3536537 AAAGGCGGAAGAAAT TGCCTGGCAGCTA GTG TTGCCGCCAGGAA TTTATAATTATCGGG TERM 3840 3536565 - 3536537 - gT 72 -9.5 -3.109 | opp_overlap 3536537, overlap 3536536 AAAGGCGGAAGAAAT TGCCTGGCAGCTA GTG TTGCCGCCAGGAA TTTATAATTATCGGG thiJ 3535995 - 3536585 + | hypothetical protein thiI 3538104 - 3536653 - | thiamine biosynthesis protein ThiI YPO3174 3538372 - 3538202 - | hypothetical protein TERM 3841 3538500 - 3538482 - g 72 -8.2 -3.96148 | CCGCTTCACCAGAAA TCAAAGCC GCC AGCTTTGA AACATCACTCAGTGA xseB 3538454 - 3538708 + | exodeoxyribonuclease VII small subunit TERM 3842 3539069 - 3539096 + G 78 -6.2 -4.90471 | gap 1 GGCCCACGCTATTTT GGCCGGTG-ATGC ACT GCAAACGCTGGCC TTTTCTATTTTGGCT ispA 3538713 - 3539633 + | geranyltranstransferase dxs 3539789 - 3541648 + | 1-deoxy-D-xylulose-5-phosphate synthase TERM 3843 3541753 - 3541721 - T 100 -11.3 -4.13973 | opp_overlap 3541728, overlap 3541725 3541727 3541728 AGATATCAGAAACAA TAAATATCCTCCGGC ATA GCCGGAGGTTTTTCA TATGCGCCTATAAGG TERM 3844 3541749 - 3541725 - T 100 -9.9 -4.63952 | opp_overlap 3541728, overlap 3541721 3541727 3541728 ATCAGAAACAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCATATGCGCCTAT TERM 3845 3541747 - 3541727 - T 100 -12.5 -3.91443 | opp_overlap 3541728, overlap 3541725 3541721 3541728 CAGAAACAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 3846 3541746 - 3541728 - T 100 -16 -2.93239 | opp_overlap 3541728, overlap 3541727 3541725 3541721 AGAAACAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 3847 3541728 - 3541746 + T 100 -16 -4.8048 | opp_overlap 3541728 3541727 3541725 3541721 AGAAACAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC tnp 3542285 - 3541827 - | transposase for the IS1541 insertion element TERM 3848 3542416 - 3542398 - R 100 -16 -3.07307 | opp_overlap 3542398 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAT TERM 3849 3542398 - 3542416 + r 100 -16 -4.37092 | opp_overlap 3542398 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAT TERM 3850 3542460 - 3542431 - R 95 -12.3 -3.28712 | opp_overlap 3542435, overlap 3542435 GTTTTCTGGGCACAA TAAAGGCATAGCC CGTG GGTTATGCCTTTA CGTGATAGTCTCTCT TERM 3851 3542435 - 3542456 + r 84 -10.9 -3.6959 | opp_overlap 3542431 3542435 TCTGGGCACAATAAA GGCATAGCC CGTG GGTTATGCC TTTACGTGATAGTCT TERM 3852 3542456 - 3542435 - R 86 -8.7 -4.30719 | opp_overlap 3542435, overlap 3542431 TCTGGGCACAATAAA GGCATAGCC CGTG GGTTATGCC TTTACGTGATAGTCT pgpA 3542984 - 3542499 - | phosphatidylglycerophosphatase A thiL 3543966 - 3542977 - | thiamine monophosphate kinase TERM 3853 3543995 - 3544029 + r 100 -21.8 -2.84059 | opp_overlap 3543997 3544001, overlap 3543997 3544001 AAATGTTAACTGATA TATAAATTAAGGCCGG ATA CCGGCCTTAATTTATA TCGTTAATGTATATC TERM 3854 3543997 - 3544027 + r 100 -20 -2.96235 | opp_overlap 3543997 3544001, overlap 3543995 3544001 ATGTTAACTGATATA TAAATTAAGGCCGG ATA CCGGCCTTAATTTA TATCGTTAATGTATA TERM 3855 3544027 - 3543997 - R 100 -20 -2.95091 | opp_overlap 3543997 3543995 3544001, overlap 3544001 ATGTTAACTGATATA TAAATTAAGGCCGG ATA CCGGCCTTAATTTA TATCGTTAATGTATA TERM 3856 3544023 - 3544001 - R 100 -16.4 -4.15061 | opp_overlap 3543997 3543995 3544001, overlap 3543997 TAACTGATATATAAA TTAAGGCCGG ATA CCGGCCTTAA TTTATATCGTTAATG TERM 3857 3544001 - 3544023 + r 100 -16.4 -4.14541 | opp_overlap 3544001 3543997, overlap 3543997 3543995 TAACTGATATATAAA TTAAGGCCGG ATA CCGGCCTTAA TTTATATCGTTAATG nusB 3544623 - 3544207 - | transcription antitermination protein NusB TERM 3858 3544461 - 3544421 - G 70 -3.3 -4.88918 | opp_overlap 3544433, overlap 3544423 TGACGGGAAAGAAAA GGTGCCATTAATGCATC CAGAGAT GCTGCATTAACCGCAAC CCCTGACAGCAATTC TERM 3859 3544533 - 3544549 + g 71 -5.1 -4.57569 | opp_overlap 3544536, overlap 3544536 ACAGGAACTGTAATT CAACATC AGC GATGTCG TTTTTAGACAACTGC ribH 3545114 - 3544644 - | riboflavin synthase subunit beta ribD 3546359 - 3545250 - | bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase YPO3184 3546958 - 3546509 - | transcriptional regulator NrdR YPO3185 3547622 - 3547029 - | hypothetical protein TERM 3860 3547166 - 3547180 + g 82 -8.6 -4.54608 | CTTTGATGCTCGCAT CCAGTA ATT TACTGG TTTCTGTTTCTTTTA TERM 3861 3547577 - 3547559 - G 79 -11.8 -3.26807 | opp_overlap 3547557, overlap 3547557 ATGATTTAAAAACCA CAGACTGA TTT TCAGTCTG ACTCTCTATCGTTCG YPO3186 3548350 - 3547655 - | hypothetical protein TERM 3862 3548574 - 3548542 - R 100 -11.3 -4.43501 | opp_overlap 3548549, overlap 3548546 3548548 3548549 AATTTACTGATAAAA TAAATATCCTCCGGC ATA GCCGGAGGTTTTTCA TATGCGCCTATAAGG TERM 3863 3548570 - 3548546 - R 100 -9.9 -4.7878 | opp_overlap 3548549, overlap 3548542 3548548 3548549 TACTGATAAAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCATATGCGCCTAT TERM 3864 3548568 - 3548548 - R 100 -12.5 -3.99938 | opp_overlap 3548549, overlap 3548546 3548542 3548549 CTGATAAAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 3865 3548567 - 3548549 - R 100 -16 -2.98878 | opp_overlap 3548549, overlap 3548548 3548546 3548542 TGATAAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 3866 3548549 - 3548567 + r 100 -16 -4.8048 | opp_overlap 3548549 3548548 3548546 3548542 TGATAAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC tnp 3549106 - 3548648 - | transposase for the IS1541 insertion element TERM 3867 3549219 - 3549237 + r 100 -16 -4.36914 | opp_overlap 3549219 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 3868 3549237 - 3549219 - R 100 -16 -3.07307 | opp_overlap 3549219 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 3869 3549253 - 3549281 + r 71 -8.9 -3.24924 | opp_overlap 3549256, overlap 3549251 3549255 3549256 TTTTCTGGGCACAAA AAACCCTGAAACT AAC AGTTTCAGGGCTA TCTTATACATCGAAC TERM 3870 3549255 - 3549279 + r 84 -11.5 -3.18945 | opp_overlap 3549256, overlap 3549253 3549251 3549256 TTCTGGGCACAAAAA ACCCTGAAACT AAC AGTTTCAGGGC TATCTTATACATCGA TERM 3871 3549278 - 3549256 - R 100 -15 -5.24129 | opp_overlap 3549255 3549253 3549251 3549256 TCTGGGCACAAAAAA CCCTGAAACT AAC AGTTTCAGGG CTATCTTATACATCG TERM 3872 3549256 - 3549278 + r 100 -15 -2.51045 | opp_overlap 3549256, overlap 3549255 3549253 3549251 TCTGGGCACAAAAAA CCCTGAAACT AAC AGTTTCAGGG CTATCTTATACATCG secF 3550281 - 3549313 - | preprotein translocase subunit SecF secD 3552139 - 3550292 - | preprotein translocase subunit SecD TERM 3873 3552000 - 3552030 + g 77 -10.5 -3.53091 | gap 1 TGGACCAGCGTTGTC TCACTGGCG-GCGA TTCC TCGCGCACCAGTGA TTTGAACAGCCGGAT yajC 3552502 - 3552167 - | preprotein translocase subunit YajC TERM 3874 3552428 - 3552446 + g 78 -9.6 -3.90112 | opp_overlap 3552418 TACTACCAGCATGAT CAGCATGG AGG TCATGCTG TTTCCTTGAGCCGGA tgt 3553738 - 3552614 - | queuine tRNA-ribosyltransferase TERM 3875 3553250 - 3553223 - G 73 -9.1 -3.74872 | gap 1, opp_overlap 3553217 ATTCAGCTCATCAAA GCGCTG-GCGGC TACGG GCAGCCCAGCGC AGTGACATTTCCATC TERM 3876 3553706 - 3553685 - G 70 -9.3 -3.57462 | opp_overlap 3553699 3553701, overlap 3553655 CACGCCACGCTCAAA CACCAGCCG ACCA CGGCGGGCG CGCCCATCCGTTTTT TERM 3877 3553701 - 3553716 + g 80 -2.4 -5.38249 | opp_overlap 3553685, overlap 3553699 ACCAGCCGACCACGG CGGGCG CGCC CATCCG TTTTTTGTAATTCGT TERM 3878 3553747 - 3553773 + r 81 -7.4 -4.68593 | ACTTCACATAACCTC CAGCATCAGA GAAACAG TCTGATGTTG TTTTTGCCTGATCAC queA 3554901 - 3553831 - | S-adenosylmethionine:tRNA ribosyltransferase-isomerase YPO3193 3555104 - 3555685 + | hypothetical protein TERM 3879 3555862 - 3555852 - f 73 -5.4 -4.67641 | ACTGCAAAACTAAAA TCGT TTA ACGA TAGGCAAAAACTATC ahpC 3555984 - 3556586 + | putative alkyl hydroperoxide reductase subunit c TERM 3880 3556650 - 3556627 - f 93 -12.5 -3.14132 | opp_overlap 3556627 CTCGGGGGCTATCAA GCCAGTCAG TTCACT CTGACTGGC TTTTTTTGTGCCCAG TERM 3881 3556627 - 3556650 + F 100 -12.5 -5.60993 | opp_overlap 3556627 CTCGGGGGCTATCAA GCCAGTCAG TTCACT CTGACTGGC TTTTTTTGTGCCCAG TERM 3882 3556688 - 3556670 - f 100 -16 -4.36914 | opp_overlap 3556670 TTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC TERM 3883 3556670 - 3556688 + F 100 -16 -3.07307 | opp_overlap 3556670 TTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC tnp 3556801 - 3557259 + | transposase for the IS1541 insertion element TERM 3884 3557333 - 3557365 + T 100 -11.3 -4.14739 | opp_overlap 3557340, overlap 3557337 3557339 3557340 CCTTATAGGCGCATA TGAAAAACCTCCGGC TAT GCCGGAGGATATTTA TTTTCCCCTAGATAC TERM 3885 3557337 - 3557361 + T 100 -9.9 -4.67048 | opp_overlap 3557340, overlap 3557333 3557339 3557340 ATAGGCGCATATGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTTTCCCCTAG TERM 3886 3557339 - 3557359 + T 100 -12.5 -3.94471 | opp_overlap 3557340, overlap 3557337 3557333 3557340 AGGCGCATATGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTTTCCCCT TERM 3887 3557358 - 3557340 - T 100 -16 -4.8048 | opp_overlap 3557339 3557337 3557333 3557340 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTTCCCC TERM 3888 3557340 - 3557358 + T 100 -16 -2.95598 | opp_overlap 3557340, overlap 3557339 3557337 3557333 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTTCCCC YPO3196 3557518 - 3557387 - | hypothetical protein TERM 3889 3557468 - 3557457 - G 70 -3 -4.89852 | opp_overlap 3557447 TTATATTGATAAAAA TCAA TACG TTGA ATTAAAAACCCTCTC YPO3197 3557819 - 3557544 - | hypothetical protein TERM 3890 3559424 - 3559436 + r 75 -10.5 -2.76468 | overlap 3559421 CCAATGATGTCCGTC GCCCC GCA GGGGC TGCTATTGGCTACTA TERM 3891 3559591 - 3559620 + r 95 -12.3 -3.35813 | opp_overlap 3559590 3559591 3559593 AGTATCTGAAAATAT TATCCCCTATCGA ACTA TTGATGGGGGATA TTCATTAGAGTGGAG YPO3199 3560340 - 3559660 - | short chain dehydrogenase TERM 3892 3560458 - 3560423 - R 87 -4.7 -5.52986 | opp_overlap 3560423 3560427, overlap 3560427 ACTGGAGCAAAAAAA CAGCTCAGTTATCAC TGAATT GTTATCCCTGAGCTG CTCTAGTGAGTTATC malZ 3562324 - 3560495 - | maltodextrin glucosidase TERM 3893 3561980 - 3561964 - G 80 -2.9 -5.26918 | overlap 3561965 AGATCTGATAAAAAA CTTGGTC CGC GACCCAA TCAGGCCCGCTATCG TERM 3894 3562843 - 3562817 - R 100 -6.5 -5.85244 | opp_overlap 3562817 AATTAAAAGAAAAAA GCCGGGACAGA TGAAC TGTACCCCGGC TTTGTATCGATTATC proY 3564276 - 3562885 - | putative proline-specific permease TERM 3895 3563477 - 3563460 - G 77 -11.3 -3.36492 | opp_overlap 3563453, overlap 3563464 GCTGGAAGGTCAGAA CGAACGG ACTA CCGTTCG TGCCCACTTGATTCC TERM 3896 3564327 - 3564307 - R 100 -11.1 -4.72272 | overlap 3564285 TTTTTTCAGCAAAAA GCCACGGAT ATT AACCGTGGC TAAAAATACTCTATT brnQ 3565671 - 3564352 - | branched-chain amino acid transport system II carrier protein pstS 3567209 - 3566145 - | phosphate binding protein TERM 3897 3566387 - 3566405 + g 79 -11 -3.54307 | CAAAATCTTGCCCAC TCGCTGCC AAC GGCAGTGA TTTAACACCACTGTT phoR 3568547 - 3567231 - | phosphate regulon sensor protein TERM 3898 3567311 - 3567301 - G 78 -2.4 -5.29885 | AAGGTAAAAATAAAA CGGG TAC CCAG ACCAATTTCACTCAT TERM 3899 3568219 - 3568202 - G 76 -11.3 -3.25304 | overlap 3568192 3568214 3568215 AAATATTACCATCAA CCGTGGT GATA ACCACGG CATCAGGCAGTGACT TERM 3900 3568521 - 3568504 - G 71 -5.5 -4.45696 | GGCAAACAAAAAAGA GCCAGCT CTAA AGCCAGC GTTTTCCATGATAAG phoB 3569261 - 3568572 - | phosphate regulon transcriptional regulatory protein sbcD 3569529 - 3570773 + | exonuclease subunit SbcD TERM 3901 3571996 - 3571967 - T 80 -6.5 -4.81083 | overlap 3571960 3571986 CTGAATGAGCAAAAA CTATTGCAGAC CCATCAAC GCCTGCAACAG CTAGCAGACTATGCC YPO3208 3575269 - 3574487 - | transposase/IS protein TERM 3902 3575185 - 3575199 + g 77 -11.4 -3.3506 | overlap 3575198 CTGCCTGTTGTGACA GCGCAG GCG CTGCGC TTATAAGGCTTTCCA y1093 3576288 - 3575266 - | transposase for insertion sequence IS100 TERM 3903 3576310 - 3576292 - R 100 -13.2 -4.01078 | AAAAGTGACCATAAA CTCTCCTG AAT CAGGAGAG CAGATTACCCCCTGG YPO3211 3577934 - 3577020 - | fructokinase TERM 3904 3578001 - 3577983 - H 88 -9.6 -4.25104 | TTCTCGCGATCAAAA TACCCTGC TAG GCAGGATA ACTGTGATCTGGATA TERM 3905 3578252 - 3578228 - H 84 -11.3 -3.14132 | CCCTGCGTTGATTAA CTCGCGCGCTC CAG GCGCGCCCGAG CCAAGGATAACACTA rdgC 3578267 - 3579178 + | recombination associated protein TERM 3906 3579390 - 3579360 - T 86 -11.9 -2.91086 | overlap 3579353 3579355 AAAGGATAGATGATA TGTCGCCCCCTCT GGCAT AGAGAGGGTGACA GACTCGCTAACTCAA YPO3213 3579701 - 3579414 - | hypothetical protein YPO3214 3579935 - 3579765 - | hypothetical protein aroL 3580715 - 3580191 - | shikimate kinase II TERM 3907 3580790 - 3580770 - R 75 -3.2 -5.21709 | opp_overlap 3580787 TTCGACATCAAAAAA CCGACC GTTATTATT GGCCGG TTGAACAGGTTTACT YPO3216 3581519 - 3580962 - | putative methyltransferase YPO3217 3581787 - 3582002 + | hypothetical protein YPO3218 3582770 - 3582249 - | hypothetical protein TERM 3908 3582732 - 3582746 + g 83 -2.8 -5.39721 | CAGCCCTTGTTGTAT CTCAAT ATT AGTGAG TTTTTTATCTGCTGC YPO3219 3583285 - 3583016 - | hypothetical protein YPO3220 3584226 - 3583468 - | hypothetical protein TERM 3909 3584056 - 3584022 - G 71 -5.8 -4.29325 | overlap 3584024 CACCAAGAGCCAAAA CATTTTCGTTTTCTAC ACT GCCGAAATCGAAAATA AACTGATTAGTCTCA TERM 3910 3584470 - 3584443 - R 100 -13.6 -5.78622 | gap 1, opp_overlap 3584443 3584467 TGATTTGAAAAAAAA GCGACAT-TGGCA AAT TGCCACATGTCGC TTTACTAGCGATTTT TERM 3911 3584443 - 3584470 + r 100 -13.6 -3.75863 | gap 1, opp_overlap 3584443, overlap 3584467 TGATTTGAAAAAAAA GCGACAT-TGGCA AAT TGCCACATGTCGC TTTACTAGCGATTTT TERM 3912 3584467 - 3584481 + r 78 -5.7 -4.7497 | opp_overlap 3584443, overlap 3584443 GCAAATTGCCACATG TCGCT TTACT AGCGA TTTTTAATCAATCAG proA 3585813 - 3584554 - | gamma-glutamyl phosphate reductase TERM 3913 3584735 - 3584718 - G 74 -7.7 -4.1891 | TCGCGTTAACATAAA CTGCCGA TGAA TCGACAG CGCGGACAAAATACT proB 3586926 - 3585823 - | gamma-glutamyl kinase TERM 3914 3587047 - 3587017 - R 78 -9.1 -3.83205 | AGGCTTGATACGAAA TCACCCCCTTTAT TGTGC AGAAAGGGGGTAA TGGGGACAGTTTATG crl 3587504 - 3587103 - | DNA-binding transcriptional regulator Crl frsA 3588811 - 3587564 - | fermentation/respiration switch protein TERM 3915 3588926 - 3588897 - R 100 -9.3 -4.69326 | overlap 3588902 ATACTGAAGAGAAAA TGAAACGTCCGGC AGGC ACCGGACGCTTAA AGAACAGTAAATTAT TERM 3916 3588921 - 3588902 - R 100 -11.4 -4.32571 | overlap 3588897 GAAGAGAAAATGAAA CGTCCGGC AGGC ACCGGACG CTTAAAGAACAGTAA gpt 3589396 - 3588938 - | xanthine-guanine phosphoribosyltransferase TERM 3917 3589946 - 3589936 - g 70 -3.2 -4.89729 | overlap 3589937 TACAAAATCTAAAAA CCTC CGA GAGA AGATATCAGCAATAT YPO3226 3589823 - 3590128 + | hypothetical protein TERM 3918 3590229 - 3590219 - f 77 -4.6 -4.9218 | TAGTGATTATAAAAA CCCA TTC CGGG CGGGAGGGATGCGCA TERM 3919 3590340 - 3590326 - g 78 -5.8 -4.88258 | overlap 3590336 AAAAGGATAATAAAA TGAAAT TAC ATTTCA ATGCACAACTACATC YPO3227 3590325 - 3591929 + | putative carbohydrate-binding protein TERM 3920 3591943 - 3591965 + T 100 -13.6 -5.26875 | opp_overlap 3591924 AATCGTCTCTATCAG CGGGTATTAT TCT ATAATACCCG TTTTTTAATTCAGAA YPO3228 3593300 - 3592389 - | putative LysR-family transcriptional regulatory protein TERM 3921 3592458 - 3592468 + g 78 -4 -5.13016 | opp_overlap 3592458 3592452, overlap 3592452 ATTATCACATAAATA GTAA GCG TTAC TTTTTACTTTTAATT TERM 3922 3593611 - 3593601 - R 70 -2.6 -4.9725 | opp_overlap 3593601 ATGCCGACACAAAAA TAAA GGA TTTA ATTCTTATTTTTCCG YPO3229 3594177 - 3594022 - | hypothetical protein TERM 3923 3594492 - 3594478 - H 82 -2.1 -5.72053 | gap 1 GAATTAAATAAAAAA TG-GGC TACA GCCTCA AGTAAAAACCTCATT TERM 3924 3596513 - 3596492 - g 70 -2.2 -5.00616 | overlap 3596505 GGTTTGTTCAAAAAA CCCTATCC TAACAT GGACATGG TGTCGATTGGGCCAA pepD 3595175 - 3596635 + | aminoacyl-histidine dipeptidase dinP 3597807 - 3596749 - | DNA polymerase IV TERM 3925 3598909 - 3598895 - g 74 -4.2 -4.8543 | overlap 3598897 3598899 GAAGTTGTAGAAAAA TACACC TTG GGTGAA GGGCGTTCTAGCGCA YPO3232 3598163 - 3599110 + | hypothetical protein TERM 3926 3599186 - 3599226 + T 100 -19.1 -3.32844 | opp_overlap 3599187 3599191, overlap 3599187 3599191 GACAATAATTGAGCA ACAAAGCCCCCGAACAATG ATG CGTCGTTCGGGGGCTTTGC TTGTCAGATAAAAAA TERM 3927 3599187 - 3599225 + T 100 -22.6 -2.59564 | opp_overlap 3599187 3599191, overlap 3599186 3599191 ACAATAATTGAGCAA CAAAGCCCCCGAACAATG ATG CGTCGTTCGGGGGCTTTG CTTGTCAGATAAAAA TERM 3928 3599225 - 3599187 - T 100 -22.6 -3.2557 | opp_overlap 3599187 3599186 3599191, overlap 3599191 ACAATAATTGAGCAA CAAAGCCCCCGAACAATG ATG CGTCGTTCGGGGGCTTTG CTTGTCAGATAAAAA TERM 3929 3599191 - 3599221 + T 100 -17.6 -4.00124 | opp_overlap 3599187 3599191, overlap 3599187 3599186 TAATTGAGCAACAAA GCCCCCGAACAATG ATG CGTCGTTCGGGGGC TTTGCTTGTCAGATA TERM 3930 3599221 - 3599191 - T 100 -17.6 -4.26871 | opp_overlap 3599191 3599187 3599186, overlap 3599187 TAATTGAGCAACAAA GCCCCCGAACAATG ATG CGTCGTTCGGGGGC TTTGCTTGTCAGATA YPO3233 3599581 - 3599354 - | hypothetical protein apbE 3600616 - 3599594 - | thiamine biosynthesis lipoprotein TERM 3931 3599956 - 3599974 + g 74 -4.4 -4.79683 | overlap 3599958 CCGCGACTGGCTTTT CAATGGCG ATA CGCCAAGG TTTATTTTCTCCATT nqrF 3601880 - 3600657 - | Na(+)-translocating NADH-quinone reductase subunit F nqrE 3602492 - 3601896 - | Na(+)-translocating NADH-quinone reductase subunit E nqrD 3603128 - 3602499 - | Na(+)-translocating NADH-quinone reductase subunit D TERM 3932 3602991 - 3602970 - G 79 -8.7 -4.27796 | overlap 3602971 GAAGAAACTCGAAAA CGCAGTCAC CAGC GTGACTGCC AGAGTCATCACTAAT TERM 3933 3602990 - 3602971 - G 77 -12.2 -3.15593 | overlap 3602970 AAGAAACTCGAAAAC GCAGTCAC CAGC GTGACTGC CAGAGTCATCACTAA nqrC 3603921 - 3603121 - | Na(+)-translocating NADH-quinone reductase subunit C nqrB 3605152 - 3603911 - | Na(+)-translocating NADH-quinone reductase subunit B nqrA 3606499 - 3605156 - | Na(+)-translocating NADH-quinone reductase subunit A TERM 3934 3606723 - 3606739 + H 72 -6.5 -4.28049 | opp_overlap 3606718 CATTACACAAGCAGG TCACCAG CTG CGGGTGA TTTTAGCATTTTCCG yafK 3606995 - 3607735 + | hypothetical protein YPO3242 3608473 - 3607700 - | hypothetical protein TERM 3935 3607746 - 3607767 + g 75 -8.7 -3.91084 | opp_overlap 3607746 AATAAAGCAAATTCA CCTGGTGCA ATTT TGTGCCAGG TTTCATTACCGGTCA gmhA 3609257 - 3608676 - | phosphoheptose isomerase fadE 3609497 - 3611944 + | acyl-CoA dehydrogenase TERM 3936 3611984 - 3612009 + T 100 -9 -4.82128 | opp_overlap 3611980 3611984 TATCGAAATAATCAA CCAAGCCTCC CATTAA GGAGGCTTAG TTTTATGTTTAATAA TERM 3937 3612009 - 3611984 - T 93 -11.9 -3.62723 | opp_overlap 3611984, overlap 3611980 TATCGAAATAATCAA CCAAGCCTCCC ATTA AGGAGGCTTAG TTTTATGTTTAATAA YPO3245 3612862 - 3612116 - | hypothetical protein TERM 3938 3612614 - 3612598 - G 72 -10.1 -3.44284 | overlap 3612596 GCCCCATCAACAACA GGCGCAA ACC CTGCGCC CCGAGTAATCGCTGT TERM 3939 3612794 - 3612775 - G 71 -7.9 -4.08216 | TGATGTGCTGTAAAA TGCCGAT CGGGAT ATCGGCA ACCAAGCGATGAAGT hmwC 3614717 - 3612864 - | putative accessory processing protein TERM 3940 3614322 - 3614337 + g 70 -9 -3.62478 | TCGCTCGAATCGCAA TGGGTG CGAG CACCCA TTTCCGGCTTCATTA hmwA 3620604 - 3614872 - | putative adhesin TERM 3941 3618957 - 3618968 + g 76 -7.2 -4.33274 | overlap 3618956 3618965 ATGTCAGCGTCGCAT CGGC TCCC GCCG TTTTAGTGATATCGG hxuB 3622435 - 3620645 - | putative surface-exposed protein TERM 3942 3622656 - 3622620 - R 82 -2.4 -5.66989 | gap 1, overlap 3622637 TAAACACTAAAAAAA CCGTAAACTTA-GAC TAATTGCC GTCACAGGTTTACGG CAAACAGCAATTTGA TERM 3943 3623148 - 3623173 + r 93 -11.9 -3.62046 | overlap 3623149 TATGCTAGCTCGTAG GCTGAGCCTCA GGGA TGAGGCTCAGG TTATTGACAAAGTGC TERM 3944 3623149 - 3623172 + r 100 -15.4 -2.77013 | overlap 3623148 ATGCTAGCTCGTAGG CTGAGCCTCA GGGA TGAGGCTCAG GTTATTGACAAAGTG TERM 3945 3623246 - 3623272 + r 72 -10.1 -2.88849 | gap 1, opp_overlap 3623235, overlap 3623241 3623247 ACATCCATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCTCTGCC TERM 3946 3623247 - 3623273 + r 84 -10.1 -3.82218 | gap 1, opp_overlap 3623235, overlap 3623241 3623246 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCTCTGCCT TERM 3947 3623336 - 3623351 + r 73 -9 -3.41359 | overlap 3623334 TTGTCAGCAGTCTGA GCCTCA GGGA TGAGGC TATTAATTTTGAGGC TERM 3948 3623438 - 3623428 - R 100 -8.2 -4.8622 | overlap 3623429 GGCGTCAAGTAAAAA GGGG GAT CCCC GACGTCATTGGCGTT YPO3249 3624816 - 3623524 - | allantoate amidohydrolase TERM 3949 3624320 - 3624338 + g 71 -11 -2.84504 | overlap 3624318 3624316 ATCGCTTGCGCGACA CTGATGCC ATC GGCATCGG TCGTATTTAACCACT TERM 3950 3625322 - 3625340 + H 100 -13.2 -4.01078 | CCAGGGGGTAATCTG CTCTCCTG ATT CAGGAGAG TTTATGGTCACTTTT y1093 3625344 - 3626366 + | transposase for insertion sequence IS100 TERM 3951 3626447 - 3626433 - g 77 -11.4 -3.3506 | overlap 3626424 TGGAAAGCCTTATAA GCGCAG CGC CTGCGC TGTCACAACAGGCAG YPO3252 3626363 - 3627145 + | transposase/IS protein YPO3254 3628897 - 3628151 - | putative amino acid ABC transporter, ATP-binding protein YPO3255 3629531 - 3628878 - | putative amino acid ABC transporter, permease protein YPO3256 3630196 - 3629528 - | putative amino acid ABC transporter, permease protein YPO3257 3630997 - 3630209 - | putative amino acid ABC transporter, periplasmic protein YPO3258 3631323 - 3631108 - | hypothetical protein YPO3259 3632170 - 3631325 - | putative rpiR-family transcriptional regulatory protein TERM 3952 3631376 - 3631393 + g 73 -9.1 -3.80877 | overlap 3631374 AATTTGATGTATCCG CTGGCGG CCTT CTGCCAG TATTTTATGCAGTAA YPO3260 3632468 - 3632671 + | hypothetical protein YPO3261 3632668 - 3634065 + | amidase YPO3262 3634094 - 3634561 + | hypothetical protein TERM 3953 3634696 - 3634680 - f 78 -9.3 -3.59979 | GGTTGTCATTCCAAA GGGGGCC TTT GGCCCTC GCTCGAAAATGCCTC TERM 3954 3635300 - 3635329 + G 86 -15.1 -2.91695 | overlap 3635257 3635272 3635298 CCATTTATTGGGTTG CCAGTGCCTTGAT GTTT ATCATGGCACTGG TCCTTTGGCGCTGCC YPO3263 3634789 - 3635988 + | probable sugar transporter YPO3264 3636148 - 3636921 + | putative amino acid transporter YPO3265 3636918 - 3637259 + | hypothetical protein emrR 3637431 - 3637943 + | transcriptional repressor MprA TERM 3955 3638398 - 3638378 - g 84 -2.6 -5.55769 | gap 1 CCGCAGAATAAAAAA CAGCA-ACG TAAA CGTGTACTG CTGTTGCTGACGGCC emrA 3638327 - 3639499 + | multidrug resistance protein A emrB 3639538 - 3641073 + | multidrug resistance protein B TERM 3956 3641161 - 3641105 - T 100 -13.8 -3.40775 | opp_overlap 3641106 3641115 3641120 3641159, overlap 3641106 3641120 ATTTTTAGCCAAATA GCGGTCAACAAAAAAGGGGGCCCTGA ACTCA TCAGCGCCCCCTTTTATTTTTACCGT TCTAAAACGTCTCTC TERM 3957 3641160 - 3641106 - T 100 -17.3 -2.64144 | opp_overlap 3641106 3641115 3641120 3641159, overlap 3641105 3641120 TTTTTAGCCAAATAG CGGTCAACAAAAAAGGGGGCCCTGA ACTCA TCAGCGCCCCCTTTTATTTTTACCG TTCTAAAACGTCTCT TERM 3958 3641106 - 3641160 + T 100 -17.3 -3.3095 | opp_overlap 3641106 3641105 3641120, overlap 3641115 3641120 3641159 TTTTTAGCCAAATAG CGGTCAACAAAAAAGGGGGCCCTGA ACTCA TCAGCGCCCCCTTTTATTTTTACCG TTCTAAAACGTCTCT TERM 3959 3641115 - 3641151 + T 100 -13.8 -4.6902 | opp_overlap 3641106 3641105 3641120, overlap 3641106 3641120 AAATAGCGGTCAACA AAAAAGGGGGCCCTGA ACTCA TCAGCGCCCCCTTTTA TTTTTACCGTTCTAA TERM 3960 3641146 - 3641120 - T 100 -13.7 -5.4505 | opp_overlap 3641115 3641106 3641120, overlap 3641106 3641105 GCGGTCAACAAAAAA GGGGGCCCTGA ACTCA TCAGCGCCCCC TTTTATTTTTACCGT TERM 3961 3641120 - 3641146 + T 100 -13.7 -5.27023 | opp_overlap 3641120 3641106 3641105, overlap 3641115 3641106 GCGGTCAACAAAAAA GGGGGCCCTGA ACTCA TCAGCGCCCCC TTTTATTTTTACCGT yfiF 3642362 - 3641196 - | putative methyltransferase TERM 3962 3642390 - 3642378 - H 77 -10.5 -3.14132 | opp_overlap 3642374 TGTCTTCTCCACCAA CGCGC AGG GCGCG AAGATTACCTGATGT trxC 3642614 - 3643051 + | thioredoxin 2 TERM 3963 3643176 - 3643203 + F 75 -8.6 -3.86897 | gap 1, opp_overlap 3643147 3643146, overlap 3643171 3643177 TTTTCTGTCGGGGCG TGG-GCCATTCTA TAT TAGAATGGCGCTA TTTCTCAGGAGTCCG TERM 3964 3643177 - 3643201 + F 89 -11.5 -3.5241 | opp_overlap 3643147 3643146, overlap 3643171 3643176 TTTCTGTCGGGGCGT GGGCCATTCTA TAT TAGAATGGCGC TATTTCTCAGGAGTC YPO3271 3643221 - 3643970 + | hypothetical protein yfiQ 3644013 - 3646655 + | putative acetyltransferase pssA 3646828 - 3648186 + | phosphatidylserine synthase TERM 3965 3648218 - 3648202 - f 70 -3.6 -4.78848 | opp_overlap 3648202, overlap 3648195 GTCTTAAAGATAAAA CCCGGT GAATT AGCGGG TTTTCATCTCCCACT YPO3274 3648248 - 3648589 + | hypothetical protein TERM 3966 3648761 - 3648741 - T 72 -6.1 -4.34402 | TCGCGCACAGCAAAA CCCCACG TTTTTGG CATGGGG TCATCATTACAACGC TERM 3967 3648807 - 3648827 + T 71 -8.9 -3.35798 | opp_overlap 3648807 CGCGCACAGCAAAAA CCCCACGCT TTG GGCATGGGG TTATCAATACAACGT TERM 3968 3648827 - 3648807 - T 100 -10.4 -4.8048 | opp_overlap 3648807 CGCGCACAGCAAAAA CCCCACGC TTTGG GCATGGGG TTATCAATACAACGT TERM 3969 3648893 - 3648873 - T 100 -10.4 -4.8048 | opp_overlap 3648870 CGCGCACAGCAAAAA CCCCACGC TTTTG GCATGGGG TCATCATTACAACGC TERM 3970 3648932 - 3648966 + T 95 -9.2 -4.50627 | opp_overlap 3648939 TGTGTTTCGCGCACA GCAAAAACCCCACGCT TTG GGCATGGGGTCTTGGC TTTATTTGATGCCTG TERM 3971 3648959 - 3648939 - T 100 -10.4 -4.8048 | opp_overlap 3648932 CGCGCACAGCAAAAA CCCCACGC TTTGG GCATGGGG TCTTGGCTTTATTTG TERM 3972 3649197 - 3649187 - T 74 -6.8 -4.27316 | opp_overlap 3649187 TCTCTCAATTCAAAA CACC TTC GGTG TTGTAAGGTTAAGCC TERM 3973 3650309 - 3650320 + T 74 -4.4 -5.06816 | CCACTTTCGTGTTTG CACA GTGC TGTG TTTTTATTAAACAGT TERM 3974 3650356 - 3650382 + T 70 -9.4 -2.75844 | opp_overlap 3650332 3650334, overlap 3650355 3650358 CCAGCTGGTATCTGC GACTGGCTTCAG CTC CAGGAGCTAGTC CTTTCACCTAACGCC TERM 3975 3650816 - 3650834 + T 82 -10.3 -3.57798 | overlap 3650809 CTTGGTCTTCCGGCG TGCGGGT TTTTC ACCCGCA TTATCGTTACTTATG TERM 3976 3654676 - 3654659 - T 100 -12.7 -5.80727 | AAAAACAACAAAAAA GGGGCGA TTTC TCGCCCC TTAGAGGATCAGCTA clpB 3657265 - 3654692 - | protein disaggregation chaperone TERM 3977 3655959 - 3655972 + g 80 -2.3 -5.41143 | AACCGTTTTTTACTG GCGTC ATCT GACTC TTTTTTTAGGGCCTG YPO3276 3658126 - 3657395 - | hypothetical protein TERM 3978 3657689 - 3657714 + g 71 -10.4 -3.06696 | opp_overlap 3657689 3657686 AGCCATAAGAGAGGA CGGTGCCGCA TTGAAT TGCGCCACCG TGTGTTCCAGAACAC TERM 3979 3658090 - 3658077 - G 70 -9.5 -3.29144 | CGAGTGGTGCTACAA GCCCG GACG CGGGC AGGCATCGGCCAATC rluD 3659105 - 3658128 - | 23S rRNA pseudouridine synthase D TERM 3980 3659140 - 3659150 + H 75 -8.2 -3.8766 | AACGTTGGGTTTTGA CGGC GAT GCCG TTTAATATAATGTGC yfiO 3659241 - 3659972 + | outer membrane protein assembly complex subunit YfiO TERM 3981 3660023 - 3659994 - f 74 -4.9 -4.77757 | opp_overlap 3660000, overlap 3659996 3660000 CCCGAAAAATGAAAA CACCAACGGCAGC TCAG GCTGCCGTTTTCA ATTTAGGTTTTCAAC TERM 3982 3660021 - 3659996 - f 72 -7.5 -3.99386 | opp_overlap 3660000, overlap 3659994 3660000 CGAAAAATGAAAACA CCAACGGCAGC TCAG GCTGCCGTTTT CAATTTAGGTTTTCA TERM 3983 3660000 - 3660017 + F 100 -12.7 -4.37198 | opp_overlap 3659996 3659994 3660000 AAATGAAAACACCAA CGGCAGC TCAG GCTGCCG TTTTCAATTTAGGTT TERM 3984 3660017 - 3660000 - f 100 -12.7 -3.58476 | opp_overlap 3660000, overlap 3659996 3659994 AAATGAAAACACCAA CGGCAGC TCAG GCTGCCG TTTTCAATTTAGGTT yfiA 3660327 - 3660689 + | putative sigma 54 modulation protein TERM 3985 3660718 - 3660733 + T 100 -11.8 -4.87291 | CTAATTTCGGTGTAA CGCGCC TTCG GGCGCG TTTTTAATTGACATC TERM 3986 3660942 - 3660918 - T 93 -9.9 -4.33153 | opp_overlap 3660921, overlap 3660920 3660921 GCGAAGACGAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCATATGCGCCTAT TERM 3987 3660940 - 3660920 - T 100 -12.5 -3.76167 | opp_overlap 3660921, overlap 3660918 3660921 GAAGACGAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 3988 3660921 - 3660939 + T 100 -16 -4.8048 | opp_overlap 3660920 3660918 3660921 AAGACGAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 3989 3660939 - 3660921 - T 100 -16 -2.84616 | opp_overlap 3660921, overlap 3660920 3660918 AAGACGAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC tnp 3661478 - 3661020 - | transposase for the IS1541 insertion element TERM 3990 3661591 - 3661609 + H 100 -16 -4.36914 | opp_overlap 3661591 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAC TERM 3991 3661609 - 3661591 - H 100 -16 -3.07307 | opp_overlap 3661591 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAC TERM 3992 3661631 - 3661648 + H 100 -12.7 -5.77988 | opp_overlap 3661631 GGGCACAACAAGAAA GCCTCCC AAGC GGGAGGC TTTTTTTATGTATAT TERM 3993 3661648 - 3661631 - H 100 -12.7 -4.51812 | opp_overlap 3661631 GGGCACAACAAGAAA GCCTCCC AAGC GGGAGGC TTTTTTTATGTATAT TERM 3994 3662759 - 3662777 + H 100 -13.2 -4.01078 | CCAGGGGGTAATCTG CTCTCCTG ATT CAGGAGAG TTTATGGTCACTTTT y1093 3662781 - 3663803 + | transposase for insertion sequence IS100 TERM 3995 3663884 - 3663870 - g 77 -11.4 -3.3506 | overlap 3663861 TGGAAAGCCTTATAA GCGCAG CGC CTGCGC TGTCACAACAGGCAG YPO3283 3663800 - 3664582 + | transposase/IS protein TERM 3996 3664951 - 3664923 - T 100 -13.2 -5.69473 | CACACCATAAAAAAA GTCATCCCGGCA GGCTG TGCTGGGATGAC CTATAAAAATCTATC tyrA 3666103 - 3664982 - | bifunctional chorismate mutase/prephenate dehydrogenase TERM 3997 3665131 - 3665117 - G 74 -10 -3.61517 | ATGGTGCTCTAACAA GGTGAG CGC CTCACC AAAGCGTTTGTAGTA aroF 3667186 - 3666116 - | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 3998 3667099 - 3667112 + g 76 -5.3 -4.8143 | opp_overlap 3667109, overlap 3667092 3667109 ACTGATCATTTTCGC TCAGT GGAA ACTGA TTTTTCAGTTCTTCC YPO3287 3667419 - 3668135 + | putative two-component response-regulatory protein YehT ydiY 3670231 - 3670998 + | hypothetical protein TERM 3999 3671016 - 3671038 + T 74 -10.6 -2.69545 | opp_overlap 3671018, overlap 3671015 3671018 CACCATTCGTCTATA TAGCGTGGTG TGA TACCGCGCTA ATTCTCCTCTCTGCC TERM 4000 3671237 - 3671184 - T 100 -13.3 -5.63103 | gap 1, opp_overlap 3671202 3671233, overlap 3671188 3671202 TGCCAACTAAAAAAA TAGAGCACAAATAAATATCCTCCGGC ATA GCCGGAGGTTTTTCATATGCGC-CTA TAAGGCTCTGTTACC TERM 4001 3671234 - 3671188 - T 100 -15.2 -3.80651 | opp_overlap 3671202 3671233, overlap 3671184 3671202 AACTAAAAAAATAGA GCACAAATAAATATCCTCCGGC ATA GCCGGAGGTTTTTCATATGCGC CTATAAGGCTCTGTT TERM 4002 3671202 - 3671220 + T 100 -16 -4.8048 | opp_overlap 3671188 3671184 3671202 AGCACAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 4003 3671220 - 3671202 - T 100 -16 -2.93101 | opp_overlap 3671202, overlap 3671188 3671184 AGCACAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC tnp 3671759 - 3671301 - | transposase for the IS1541 insertion element TERM 4004 3671890 - 3671872 - R 100 -16 -3.07307 | opp_overlap 3671872 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 4005 3671872 - 3671890 + r 100 -16 -4.36914 | opp_overlap 3671872 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 4006 3671909 - 3671929 + r 86 -12.6 -2.52987 | opp_overlap 3671909, overlap 3671908 TCTGGGCACAAAAAA GGGCTAGC ACATG GCTAGCCC CTTCATAAGTATTAA TERM 4007 3671929 - 3671909 - R 100 -12.6 -5.24129 | opp_overlap 3671909 3671908 TCTGGGCACAAAAAA GGGCTAGC ACATG GCTAGCCC CTTCATAAGTATTAA rplS 3672318 - 3671971 - | 50S ribosomal protein L19 trmD 3673139 - 3672399 - | tRNA (guanine-N(1)-)-methyltransferase rimM 3673726 - 3673178 - | 16S rRNA-processing protein rpsP 3673996 - 3673748 - | 30S ribosomal protein S16 TERM 4008 3674053 - 3674020 - R 100 -18.3 -4.67982 | CTTTAGTTAATAAAA CAACTGGACCCCATC GGGG AACGGGGTCCAGTTG CAATATAAAAAGCCC TERM 4009 3674117 - 3674097 - R 70 -2.6 -5.00884 | opp_overlap 3674097 ATTTTGGCGAAAAAA GCAATCTA AAGCG TAGATTCC TGTTCGCACATTTTG ffh 3675585 - 3674224 - | signal recognition particle protein TERM 4010 3674515 - 3674525 + g 71 -6.8 -4.26076 | opp_overlap 3674513 TTCTGGCAACTGACC TGCC CCT GGCA TTTTACTCAACATAC TERM 4011 3675125 - 3675137 + g 70 -9.1 -3.62518 | opp_overlap 3675125 AAATCAATGCCAACA CCCTG AGC CAGGG TTTCCAACTGTTTGA corE 3675649 - 3676542 + | hypothetical protein YPO3298 3676704 - 3677894 + | hypothetical protein TERM 4012 3677954 - 3677930 - T 100 -9.9 -4.44046 | opp_overlap 3677933, overlap 3677932 3677933 GTCAGTTTAAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCATATGCGCCTAT TERM 4013 3677952 - 3677932 - T 100 -12.5 -3.82628 | opp_overlap 3677933, overlap 3677930 3677933 CAGTTTAAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 4014 3677951 - 3677933 - T 100 -16 -2.88854 | opp_overlap 3677933, overlap 3677932 3677930 AGTTTAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 4015 3677933 - 3677951 + T 100 -16 -4.8048 | opp_overlap 3677933 3677932 3677930 AGTTTAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC tnp 3678490 - 3678032 - | transposase for the IS1541 insertion element TERM 4016 3678621 - 3678603 - R 100 -16 -3.07307 | opp_overlap 3678603 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAT TERM 4017 3678603 - 3678621 + r 100 -16 -4.37092 | opp_overlap 3678603 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAT TERM 4018 3678660 - 3678643 - R 87 -4.8 -5.55769 | opp_overlap 3678638 3678643 3678645 GGGCACAATAAAAAA GACGCT TTAATC AGCGCC TTTTATCATTCTCCT luxS 3679209 - 3678694 - | S-ribosylhomocysteinase TERM 4019 3679283 - 3679311 + r 100 -10.4 -4.36554 | AACTTTTACTCATCC TGCGCGTCTT AATATGTGA AAGACGCGCA TTTGTTATCATCATC TERM 4020 3679350 - 3679367 + r 100 -11.3 -5.55001 | TAGAGATGTTAATTT GGCCACA GTGA TGTGGCC TTTTCTTTTTTATTG gshA 3680936 - 3679377 - | glutamate--cysteine ligase yqaA 3681447 - 3681019 - | hypothetical protein yqaB 3682010 - 3681444 - | fructose-1-phosphatase TERM 4021 3682250 - 3682235 - R 91 -8.2 -4.67635 | opp_overlap 3682235, overlap 3682227 GCCAAAAGCAGAAAA CCCCGC TATA GCGAGG TTCCTTAATATGGTG TERM 4022 3682307 - 3682322 + r 73 -9 -3.52102 | overlap 3682295 CCTCGCCCTACGGGC CGTTGC TAAA GCAACG TTGTCTCGCTACGCT TERM 4023 3682422 - 3682407 - R 91 -8.2 -4.58466 | opp_overlap 3682407, overlap 3682399 GCCAGAAGCAGAAAA CCCCGC TATA GCGAGG TTCCTTAATATGGTG TERM 4024 3682479 - 3682494 + r 73 -9 -3.52102 | overlap 3682467 CCTCGCCCTACGGGC CGTTGC TAAA GCAACG TTGTCTCGCTACGCT TERM 4025 3682594 - 3682579 - R 91 -8.2 -4.67635 | opp_overlap 3682579, overlap 3682571 GCCAAAAGCAGAAAA CCCCGC TATA GCGAGG TTCCTTAATATGGTG TERM 4026 3683274 - 3683240 - R 100 -15 -5.27206 | opp_overlap 3683246, overlap 3683243 TAGAGACAATAAAAA GCAGTAGCGCCTCGTG TTA CACGAGACGCTGCTTC AAAATCAGTAAGTCG TERM 4027 3683271 - 3683243 - R 100 -15.3 -3.43245 | opp_overlap 3683246, overlap 3683240 AGACAATAAAAAGCA GTAGCGCCTCGTG TTA CACGAGACGCTGC TTCAAAATCAGTAAG TERM 4028 3683246 - 3683268 + r 93 -13.4 -2.72463 | opp_overlap 3683243 3683240 CAATAAAAAGCAGTA GCGCCTCGTG TTA CACGAGACGC TGCTTCAAAATCAGT csrA 3683464 - 3683279 - | carbon storage regulator TERM 4029 3683665 - 3683691 + r 74 -9.4 -3.35849 | opp_overlap 3683665, overlap 3683663 AGGAAAATTAAAAAA CGCCATACCTAG TAC CGAGATATGGCG TGTTGATTTAATAGA TERM 4030 3683691 - 3683665 - R 100 -11.6 -5.48054 | opp_overlap 3683663 3683665 AGGAAAATTAAAAAA CGCCATACCTAG TAC CGAGATATGGCG TGTTGATTTAATAGA alaS 3686341 - 3683714 - | alanyl-tRNA synthetase TERM 4031 3684411 - 3684424 + g 78 -2.3 -5.27335 | opp_overlap 3684412, overlap 3684412 TACTTCTCGCCGAAC AGTGC CATT GCACC TTTTTCTTTCGCCGC recX 3687044 - 3686481 - | recombination regulator RecX TERM 4032 3687154 - 3687123 - R 100 -18.2 -3.6682 | opp_overlap 3687123 3687127, overlap 3687127 TGTTATTTACTCAAA CAAACAGACCGCCA CAAG TGACGGTCTGTTTG TTTACTCCAACTGGT TERM 4033 3687123 - 3687154 + r 100 -16 -3.73953 | opp_overlap 3687123 3687127, overlap 3687127 TGTTATTTACTCAAA CAAACAGACCGCCA CAAG TGACGGTCTGTTTG TTTACTCCAACTGGT TERM 4034 3687127 - 3687150 + r 100 -11 -4.49556 | opp_overlap 3687123 3687127, overlap 3687123 ATTTACTCAAACAAA CAGACCGCCA CAAG TGACGGTCTG TTTGTTTACTCCAAC TERM 4035 3687150 - 3687127 - R 100 -13.2 -4.46514 | opp_overlap 3687127 3687123, overlap 3687123 ATTTACTCAAACAAA CAGACCGCCA CAAG TGACGGTCTG TTTGTTTACTCCAAC recA 3688252 - 3687182 - | recombinase A TERM 4036 3687296 - 3687314 + g 78 -3.8 -5.10933 | opp_overlap 3687300, overlap 3687301 CAGTTTTTTATCTAA CTCAGC AGCAATG GCTGGG TTTTCTTTTAAATAG YPO3308 3688855 - 3688367 - | competence damage-inducible protein A TERM 4037 3688788 - 3688798 + g 71 -6.8 -4.27465 | TCTGCACAGGTCACC CACG CAC CGTG TTCTTTTAACTTATG TERM 4038 3689044 - 3689057 + H 70 -5.2 -4.56775 | opp_overlap 3689054 CGAATAGCGGTGAGA GGGG AGAAAA CCCC TTTTTAAAAGGGGAT TERM 4039 3689070 - 3689054 - H 100 -10.9 -4.41548 | opp_overlap 3689044 TGAGAGGGGAGAAAA CCCCTTT TTA AAAGGGG ATAAAAAATCATGAT TERM 4040 3689627 - 3689646 + G 70 -9.3 -3.59233 | overlap 3689624 GGTGGTGCTTATGTT TCAGCCC GCGCTG GGGCTGA TTACTTTAATGGTTA YPO3309 3689172 - 3690512 + | hypothetical protein YPO3310 3690760 - 3691704 + | putative transcriptional regulatory protein TERM 4041 3691746 - 3691731 - T 76 -10.4 -3.0395 | opp_overlap 3691726 ACATATTGGTTAACA GCCCCA GCCA TGGGGC GGACACTTTACTCTT YPO3311 3693350 - 3691926 - | hypothetical protein TERM 4042 3693163 - 3693177 + g 74 -8.6 -4.08767 | AATTCAGCGCACACC TTGGCA TCA TGCCAA TTTTCCACACCTCCC TERM 4043 3693398 - 3693387 - R 73 -7.2 -4.07885 | TATTTCGGCTGAAAA CGCG CACG CGCG ATGGCCGTTTGCCAG YPO3312 3694858 - 3693371 - | glycerol kinase TERM 4044 3694547 - 3694587 + g 80 -10.5 -3.66178 | gap 2, opp_overlap 3694548, overlap 3694548 GAAAGCCTCTGAACG ACGGCACTGCCAGCTTACG ACTGG CGTGAGC-GGC-GTGCCGG TTTCCCGTTCCCAAA TERM 4045 3694548 - 3694586 + g 82 -14 -2.79492 | gap 2, opp_overlap 3694548, overlap 3694547 AAAGCCTCTGAACGA CGGCACTGCCAGCTTACG ACTGG CGTGAGC-GGC-GTGCCG GTTTCCCGTTCCCAA TERM 4046 3694586 - 3694548 - G 74 -11.8 -2.7186 | gap 2, opp_overlap 3694548 3694547 AAAGCCTCTGAACGA CGGCACTGCCAGCTTACG ACTGG CGTGAGC-GGC-GTGCCG GTTTCCCGTTCCCAA YPO3313 3695805 - 3694861 - | C-terminal region of transketolase YPO3314 3696628 - 3695798 - | putative N-terminal region of transketolase TERM 4047 3696067 - 3696079 + g 76 -4.8 -5.00267 | TTGATTTAGTGGTCC CTGC CAGTT GCAG TTTATTTTTGTCGTT TERM 4048 3696265 - 3696291 + g 72 -3.7 -4.89567 | gap 1, opp_overlap 3696252, overlap 3696260 3696265 3696266 AACCGTGCCCTAAAG C-CCCGGTATTG AGTT CAATGCCTGGCG TTTTGTGTTTTACAG rbsC 3698029 - 3696884 - | putative sugar ABC transporter, permease protein YPO3316 3699549 - 3698026 - | putative sugar ABC transporter, ATP-binding protein TERM 4049 3698486 - 3698502 + g 91 -7.9 -5.09173 | opp_overlap 3698486 CAGGCGACCGATGAA GCAGGGA AAA TCCCGGC TTTTTTACGATCTTC YPO3317 3700166 - 3699549 - | putative lipoprotein TERM 4050 3700202 - 3700181 - R 89 -11.5 -3.53761 | opp_overlap 3700184, overlap 3700170 3700169 3700182 3700184 TAATGCCTCCTGAAA GGAGGGGCG ATGT CGCCCCTCA TTACGGCTAAAGCGG TERM 4051 3700201 - 3700182 - R 100 -15 -2.72043 | opp_overlap 3700184, overlap 3700170 3700169 3700181 3700184 AATGCCTCCTGAAAG GAGGGGCG ATGT CGCCCCTC ATTACGGCTAAAGCG TERM 4052 3700199 - 3700184 - R 86 -11.8 -2.90496 | opp_overlap 3700184, overlap 3700170 3700169 3700182 3700181 TGCCTCCTGAAAGGA GGGGCG ATGT CGCCCC TCATTACGGCTAAAG TERM 4053 3700184 - 3700199 + r 83 -11.8 -2.72344 | opp_overlap 3700170 3700169 3700184 3700182 3700181 TGCCTCCTGAAAGGA GGGGCG ATGT CGCCCC TCATTACGGCTAAAG YPO3318 3701233 - 3700259 - | putative sugar ABC transporter, periplasmic protein TERM 4054 3700344 - 3700356 + g 79 -9.1 -4.15833 | TGTTTCTCTTCCAGA CCGGT TTT ACCGG TTTTCAGATACTGAT TERM 4055 3700502 - 3700513 + g 74 -7.2 -4.2679 | CACCACCACATCATT GCGG CCCG CCGC TTTTAATGCGGCTTC TERM 4056 3703238 - 3703227 - g 76 -4.4 -4.91109 | CTGGCACCACAAAAA GACT GGCC AGTC AACGATCCCGCAGAG katY 3701736 - 3703949 + | catalase-peroxidase TERM 4057 3703992 - 3703946 - f 82 -6.9 -4.77122 | gap 2, opp_overlap 3703955 3703957, overlap 3703950 3703951 3703955 3703957 TGATATAAAAAATAA CTAACTAAATAGAGGGGAGGA TTTATCT TCC-CCCCTCTATTTA-TAAG AGAAGAAAATCATAA TERM 4058 3703989 - 3703950 - f 78 -8.8 -3.81144 | gap 1, opp_overlap 3703955 3703957, overlap 3703946 3703951 3703955 3703957 ATAAAAAATAACTAA CTAAATAGAGGGGAGGA TTTATCT TCC-CCCCTCTATTTAT AAGAGAAGAAAATCA TERM 4059 3703988 - 3703951 - f 89 -12.3 -2.86246 | gap 1, opp_overlap 3703955 3703957, overlap 3703950 3703946 3703955 3703957 TAAAAAATAACTAAC TAAATAGAGGGGAGGA TTTATCT TCC-CCCCTCTATTTA TAAGAGAAGAAAATC TERM 4060 3703984 - 3703955 - f 80 -8.7 -4.05045 | gap 1, opp_overlap 3703955 3703957, overlap 3703951 3703950 3703946 3703957 AAATAACTAACTAAA TAGAGGGGAGGA TTTATCT TCC-CCCCTCTA TTTATAAGAGAAGAA TERM 4061 3703955 - 3703984 + F 78 -8.7 -3.85698 | gap 1, opp_overlap 3703955 3703951 3703950 3703946 3703957, overlap 3703957 AAATAACTAACTAAA TAGAGGGGAGGA TTTATCT TCC-CCCCTCTA TTTATAAGAGAAGAA TERM 4062 3703980 - 3703957 - f 75 -8.8 -3.59634 | opp_overlap 3703955 3703957, overlap 3703955 3703951 3703950 3703946 ATAACTAACTAAATA GAGGGGAGGA TTTA TCTTCCCCCC TCTATTTATAAGAGA TERM 4063 3703957 - 3703980 + F 71 -8.8 -3.3353 | opp_overlap 3703957 3703955 3703951 3703950 3703946, overlap 3703955 ATAACTAACTAAATA GAGGGGAGGA TTTA TCTTCCCCCC TCTATTTATAAGAGA cybC 3704026 - 3704409 + | putative cytochrome B562 TERM 4064 3704529 - 3704488 - f 76 -11 -2.56571 | gap 1, overlap 3704496 3704513 TATATACCCAAGTGA CTTCAAGATGCAGGTAGGC AGCTA ACCC-CCTGCATCGTGAAG GGCGACGGGTATATT cybB 3704557 - 3705087 + | cytochrome b561 TERM 4065 3705121 - 3705140 + T 100 -13.6 -4.09685 | TGTTCCGTTTCTCTT TGTCCCGC GTTT GCGGGACA TTTTAAAGAATGCAA YPO3322 3706054 - 3705344 - | twin-argninine leader-binding protein DmsD TERM 4066 3705961 - 3705949 - G 84 -2.6 -5.55769 | GCTCACAATAAAAAA GCGC ACCTA GCAC TCGCCCCGTTAGTCC TERM 4067 3706175 - 3706149 - R 100 -15.3 -3.85092 | ATGAGGCAGAGCAAA GCTATTCTGGG CGCTC CCCAGAATAGC CAAAGTGTCACCGCC dmsC 3707060 - 3706200 - | anaerobic dimethyl sulfoxide reductase chain C dmsB 3707679 - 3707062 - | anaerobic dimethyl sulfoxide reductase chain B dmsA 3710141 - 3707691 - | anaerobic dimethyl sulfoxide reductase chain A araD 3711299 - 3710604 - | L-ribulose-5-phosphate 4-epimerase TERM 4068 3711348 - 3711370 + H 83 -11.4 -2.95116 | opp_overlap 3711348, overlap 3711345 3711350 GGCGATAATGAAAAA CATCATTCGG TAT TCGAATGATG TCATTTAACTAATAG TERM 4069 3711370 - 3711348 - H 100 -10.7 -4.93365 | opp_overlap 3711345 3711348 3711350 GGCGATAATGAAAAA CATCATTCG GTATT CGAATGATG TCATTTAACTAATAG TERM 4070 3712162 - 3712140 - g 100 -4.9 -5.75342 | GTGTTGCAAAAAAAA CAAAAACTG ATCCG CAGTTTTGG CGGCGCTGTCGCACT fucR 3712002 - 3712811 + | putative deoR-family regulatory protein YPO3328 3712873 - 3713976 + | putative sugar ABC transporter, periplasmic protein TERM 4071 3714114 - 3714096 - f 100 -16 -4.37092 | opp_overlap 3714096 ATTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC TERM 4072 3714096 - 3714114 + F 100 -16 -3.07307 | opp_overlap 3714096 ATTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC tnp 3714227 - 3714685 + | transposase for the IS1541 insertion element TERM 4073 3714759 - 3714791 + F 100 -11.3 -4.07687 | opp_overlap 3714766, overlap 3714763 3714765 3714766 CCTTATAGGCGCATA TGAAAAACCTCCGGC TAT GCCGGAGGATATTTA TTTTCGACCCGCGGT TERM 4074 3714763 - 3714787 + F 100 -9.9 -4.64861 | opp_overlap 3714766, overlap 3714759 3714765 3714766 ATAGGCGCATATGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTTTCGACCCG TERM 4075 3714765 - 3714785 + F 100 -12.5 -3.93868 | opp_overlap 3714766, overlap 3714763 3714759 3714766 AGGCGCATATGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTTTCGACC TERM 4076 3714766 - 3714784 + F 100 -16 -2.95598 | opp_overlap 3714766, overlap 3714765 3714763 3714759 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTTCGAC TERM 4077 3714784 - 3714766 - f 100 -16 -4.8048 | opp_overlap 3714766 3714765 3714763 3714759 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTTCGAC TERM 4078 3715233 - 3715254 + G 71 -5.8 -4.3586 | TCAAACAAAAAGCCT GCCAGATC TTGCAT GAACTGGC TTTTAGTCTCGATCC YPO3330 3714836 - 3716350 + | putative sugar ABC transporter, ATP-binding protein YPO3331 3716343 - 3717332 + | putative sugar ABC transporter, permease protein YPO3332 3717345 - 3718382 + | putative sugar ABC transporter, permease protein TERM 4079 3718392 - 3718410 + F 72 -7.4 -4.0641 | opp_overlap 3718408 AAGTGATTGGGATTC CAGTGAGC GCA GCTAACTG TTTATGTAGATAAAC TERM 4080 3718635 - 3718621 - g 74 -4.2 -4.87807 | GGAATATACGAAAAA GCCC TACCTGC GGGC ACCAGTTGGGTCGAA sgbU 3718588 - 3719469 + | putative L-xylulose 5-phosphate 3-epimerase TERM 4081 3720230 - 3720246 + G 70 -8.7 -3.60151 | GGCATGTTTGATGTG GTCGGTG CGG CACTGAC TTCTGGTTTACACGA lyx 3719480 - 3720976 + | putative L-xylulose kinase TERM 4082 3721131 - 3721108 - f 72 -9.6 -3.09823 | opp_overlap 3721103, overlap 3721123 GTGCGGAAAATGAGA TCCACCCTTT ATAA AGAGGGTGGA ACCGTCGCTTAAGCC TERM 4083 3721741 - 3721725 - g 74 -3.6 -5.03715 | overlap 3721727 ATCATGGGCAAAAAA GGCCAG CGGGT CTGGAC TGGGGGTAACGATGC fumA 3721374 - 3723017 + | fumarate hydratase, class I TERM 4084 3723086 - 3723117 + F 100 -10.2 -4.36595 | opp_overlap 3723086, overlap 3723077 TTAAGCGGCTATCAA GGCCTGAGTTCT TCATTCAC GGAGCTCAGGCC TTTTCCGTTTCAGTG YPO3336 3723146 - 3723451 + | hypothetical protein map 3723448 - 3724233 + | methionine aminopeptidase TERM 4085 3724328 - 3724352 + T 82 -7.8 -4.4261 | gap 1, opp_overlap 3724329, overlap 3724329 3724329 CCTGAATGCCATTCA AG-CCGCGCCA TCTC TGGCGCGGACG TTTTACTCTTCGGCC TERM 4086 3724350 - 3724329 - T 84 -11.5 -3.07994 | opp_overlap 3724328 3724329 3724329 CTGAATGCCATTCAA GCCGCGCCA TCTC TGGCGCGGA CGTTTTACTCTTCGG TERM 4087 3724329 - 3724351 + T 86 -11.3 -3.25084 | gap 1, opp_overlap 3724329, overlap 3724328 3724329 CTGAATGCCATTCAA G-CCGCGCCA TCTC TGGCGCGGAC GTTTTACTCTTCGGC TERM 4088 3724329 - 3724350 + T 79 -11.5 -2.54568 | opp_overlap 3724329, overlap 3724329 3724328 CTGAATGCCATTCAA GCCGCGCCA TCTC TGGCGCGGA CGTTTTACTCTTCGG TERM 4089 3724404 - 3724436 + T 100 -13.6 -3.08073 | opp_overlap 3724413 3724414, overlap 3724396 CGTCATCGGGGGTTG TCTGCAGAATGAAG TTATC CTCCATTCTGCAGA TGTATTAGCGCTGCT YPO3339 3725778 - 3724591 - | hypothetical protein TERM 4090 3725978 - 3726000 + H 70 -7.7 -3.62255 | opp_overlap 3725977, overlap 3725975 TGAATTCCAATTCAG CCCGCCTTT GGATA AAAGGCCGG TTAGTTCTTCTTGAA yhjA 3728968 - 3730347 + | putative cytochrome C peroxidase YPO3343 3730412 - 3731182 + | probable extracellular solute-binding protein TERM 4091 3731788 - 3731767 - g 91 -3.1 -5.69068 | opp_overlap 3731771, overlap 3731771 TAAAAAGATAAAAAA TAAATTCAT TGAG ATGAAATTA ATGACTTTACAGCTT TERM 4092 3731784 - 3731771 - g 78 -3.9 -5.19003 | opp_overlap 3731771, overlap 3731767 AAGATAAAAAATAAA TTCAT TGAG ATGAA ATTAATGACTTTACA YPO3344 3731603 - 3731809 + | hypothetical protein YPO3345 3732005 - 3732283 + | hypothetical protein arsR 3732530 - 3732871 + | DNA-binding transcriptional repressor ArsR TERM 4093 3732963 - 3732974 + G 70 -2.2 -4.9218 | GAGGCGTTATGTTGT TGGC TGGT GCTA TTTTTATCCTGACTA arsB 3732956 - 3734245 + | arsenical pump membrane protein TERM 4094 3734359 - 3734383 + F 72 -6.3 -4.2558 | overlap 3734345 3734360 GCCTATTAGCATTGC CGCCAGTAGGG TTA CTCTCCTGGCA TTTTGATGAAGGATC TERM 4095 3734360 - 3734382 + F 74 -9.8 -3.15027 | overlap 3734345 3734359 CCTATTAGCATTGCC GCCAGTAGGG TTA CTCTCCTGGC ATTTTGATGAAGGAT TERM 4096 3734608 - 3734594 - f 75 -2.2 -5.33131 | overlap 3734604 TAATAAAAAAACAAA TTTAAC AAA ATTAAA GACCAGTTACTGATT TERM 4097 3735471 - 3735453 - g 73 -6 -4.4773 | TGATATGAACGAAAA CAGCTATA TGG TAGAGCTG GGCTGGTTCACTCCT YPO3348 3734812 - 3735771 + | transcriptional regulatory protein YPO3349 3736566 - 3735892 - | hypothetical protein dhaK 3737574 - 3736573 - | putative dihydroxyacetone kinase TERM 4098 3737362 - 3737317 - G 71 -5.3 -4.58685 | overlap 3737318 3737319 AAACGCTTCTAAAAA TGCCCCAGCCGCCGGGGAG GAGAAGAT CTCACCAACCGCTACGGCA TCCAGCATATTTTTA TERM 4099 3737542 - 3737501 - G 91 -5.2 -5.52384 | GTTTTAGCAAAAAAA TGTGGATAAGCCGCTAAA TAGCCT TTTATCGCCTCTTCCACA ACCTGATCCGGATCG YPO3351 3738431 - 3737661 - | short chain dehydrogenase ydjJ 3739610 - 3738495 - | putative Zinc-binding dehydrogenase TERM 4100 3739960 - 3739936 - H 80 -10.1 -3.69364 | opp_overlap 3739941 3739954, overlap 3739940 ATTGAATATATATAA CAAATGATCAC ATG GTGATCTTTTG AAAGACTTGGTTTTA TERM 4101 3739956 - 3739940 - H 70 -5.1 -4.45484 | opp_overlap 3739941 3739954, overlap 3739936 AATATATATAACAAA TGATCAC ATG GTGATCT TTTGAAAGACTTGGT TERM 4102 3739941 - 3739955 + H 79 -8.6 -4.09739 | opp_overlap 3739940 3739936, overlap 3739954 ATATATATAACAAAT GATCAC ATG GTGATC TTTTGAAAGACTTGG rpiB 3740093 - 3740548 + | ribose-5-phosphate isomerase B TERM 4103 3740786 - 3740804 + F 71 -6.6 -4.18351 | overlap 3740790 ATCTTTCAGCTCAGA TGCGGGGC AGT GCCCTTCA TTTCTGATTTGCTTT TERM 4104 3740790 - 3740800 + F 73 -8.2 -3.67022 | overlap 3740786 TTCAGCTCAGATGCG GGGC AGT GCCC TTCATTTCTGATTTG TERM 4105 3742378 - 3742360 - g 75 -8.8 -3.91897 | opp_overlap 3742360 CCGCCGAGTTACAAA CCCCCTTG AGA CAAGTGGG CGATTTAGAACGTAT mutS 3741342 - 3743897 + | DNA mismatch repair protein TERM 4106 3744095 - 3744122 + T 72 -7.1 -4.05193 | opp_overlap 3744095 CAAGGCATAAAAAAA CGGTGAACA TTTATCTATC TGTTCACCG TTGTTGTGTTTCATC TERM 4107 3744122 - 3744095 - T 100 -7.1 -5.66684 | opp_overlap 3744095 CAAGGCATAAAAAAA CGGTGAACA TTTATCTATC TGTTCACCG TTGTTGTGTTTCATC rpoS 3745223 - 3744225 - | RNA polymerase sigma factor RpoS nlpD 3746279 - 3745278 - | lipoprotein NlpD TERM 4108 3745727 - 3745702 - G 76 -11.9 -3.01712 | opp_overlap 3745689 CTTGGTGCGGTAACA GGTGCTGTTGT AGCG ACAACCGCACC AGATGATGGCAACAT pcm 3747009 - 3746383 - | protein-L-isoaspartate O-methyltransferase TERM 4109 3746432 - 3746417 - G 70 -3.2 -4.76075 | gap 1, overlap 3746418 3746419 3746421 ACCAGAGGAACAAAA CGGACGG CTT CCA-CCG TCTCAATATGGTATT TERM 4110 3746932 - 3746946 + g 76 -11.4 -3.22298 | opp_overlap 3746943, overlap 3746943 CGGTACCGCTTCGAT CGCCTG TAA CAGGCG TTCATCGTGAATACC surE 3747767 - 3747003 - | stationary phase survival protein SurE TERM 4111 3747361 - 3747346 - G 71 -6.8 -4.21631 | AACGCACGTAATAAA CGGCAA GTCA CTGCCG CCGCCGTATCGTAAT truD 3748794 - 3747745 - | tRNA pseudouridine synthase D TERM 4112 3747829 - 3747814 - G 77 -10.4 -3.54129 | CACACTGGTCGCAAA GCTCCC CGCA GGGAGC CAGAAACTCAGCTCA TERM 4113 3748546 - 3748560 + g 86 -11.4 -4.07885 | AAACCACTGTTCGGT GACCGC ATG GCGGTC TTTTAACCCCGCATA ispF 3749293 - 3748805 - | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase ispD 3750157 - 3749432 - | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ftsB 3750481 - 3750161 - | cell division protein FtsB ygbE 3751112 - 3750795 - | hypothetical protein cysC 3751944 - 3751303 - | adenylylsulfate kinase cysN 3753382 - 3751946 - | sulfate adenylyltransferase subunit 1 cysD 3754383 - 3753475 - | sulfate adenylyltransferase subunit 2 cysG 3755812 - 3754394 - | siroheme synthase YPO3368 3756379 - 3756113 - | hypothetical protein TERM 4114 3756273 - 3756293 + g 87 -9.7 -4.37991 | opp_overlap 3756272 3756268 ATAAATTCAAGGCAT GGACGATCA TTA TGATCGCCC TTTTCCGTGTTTTTC TERM 4115 3756385 - 3756357 - G 93 -15.5 -3.1085 | CTAATTGACTCAATA CTACTTGTAGGTA TGA TACCCACAAGTAG CTCACCAGGGGGTTC TERM 4116 3756824 - 3756806 - g 71 -7.4 -4.11216 | opp_overlap 3756806 TTTTCATCTTCAAAA CCGTTGAA GGA TTCGACGG TTATTTCCCCGATAT TERM 4117 3756806 - 3756824 + G 78 -9.6 -3.91984 | opp_overlap 3756806 TTTTCATCTTCAAAA CCGTTGAA GGA TTCGACGG TTATTTCCCCGATAT YPO3369 3756778 - 3757185 + | hypothetical protein TERM 4118 3757296 - 3757322 + T 72 -10.1 -2.88849 | gap 1, opp_overlap 3757285, overlap 3757291 3757297 ACATCCATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCTCTGCC TERM 4119 3757297 - 3757323 + T 84 -10.1 -3.82218 | gap 1, opp_overlap 3757285, overlap 3757291 3757296 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCTCTGCCT TERM 4120 3757384 - 3757404 + T 100 -14.7 -3.14931 | GTTTGTCAGCAGTCT GGGGGCGCT CTT AGCGCCCTC TTAATGAGCCATAGA cysI 3759881 - 3758151 - | sulfite reductase subunit beta cysJ 3761701 - 3759881 - | sulfite reductase subunit alpha TERM 4121 3760743 - 3760757 + g 71 -6.4 -4.431 | overlap 3760738 3760745 TGACTGAGCAGCGCC TGTGCC AGT GGCATA TTTTGTCCGTCAATA ygcM 3762094 - 3762453 + | putative 6-pyruvoyl tetrahydrobiopterin synthase family protein YPO3374 3763358 - 3762687 - | hypothetical protein TERM 4122 3763306 - 3763289 - G 83 -5.5 -5.13741 | GCAAGCGAACAAAAA TCGCTGG AACG CCAGTGA AATAACCCTCGCCCT TERM 4123 3763422 - 3763443 + r 86 -10.2 -3.74077 | opp_overlap 3763422 CCGGCCTCCACCAAA CTGGCTAC GCTCGG GTAGCCAG TTTAACTGTATCAGA TERM 4124 3763443 - 3763422 - R 82 -10.2 -3.72576 | opp_overlap 3763422 CCGGCCTCCACCAAA CTGGCTAC GCTCGG GTAGCCAG TTTAACTGTATCAGA sodC 3764067 - 3763462 - | superoxide dismutase [Cu-Zn] precursor TERM 4125 3764348 - 3764373 + r 74 -10.5 -2.67166 | opp_overlap 3764354, overlap 3764354 CAAAATCAACGCATA AAAAAACCCGC CGAA GCGGGTTTTTA ATTAATTAGTTAACT TERM 4126 3764367 - 3764354 - R 100 -9.5 -5.66684 | opp_overlap 3764348 3764354 CAACGCATAAAAAAA CCCGC CGAA GCGGG TTTTTAATTAATTAG TERM 4127 3764354 - 3764367 + r 100 -9.5 -4.93547 | opp_overlap 3764354, overlap 3764348 CAACGCATAAAAAAA CCCGC CGAA GCGGG TTTTTAATTAATTAG eno 3765734 - 3764439 - | phosphopyruvate hydratase TERM 4128 3765800 - 3765777 - R 95 -13.1 -3.02109 | AAAACTCCAGACAGA GGGGGCGAC ATCTCA GCCGCCCCC TACCACCAAATATTT pyrG 3767452 - 3765815 - | CTP synthetase mazG 3768506 - 3767664 - | nucleoside triphosphate pyrophosphohydrolase YPO3379 3768671 - 3768513 - | hypothetical protein relA 3770942 - 3768708 - | GDP/GTP pyrophosphokinase TERM 4129 3769093 - 3769075 - G 71 -6 -4.36914 | CCTTGCGTGATAAAA CCGATAAT TTG ATCACCGG GGATCGGCTGGCAAC TERM 4130 3769518 - 3769544 + g 73 -5 -4.68994 | ACCGAGGTTAGGATT CAGCCAGTCACG GCT TGGGTTTGGCTG TTTTTGAGTGATAAT barA 3771386 - 3774178 + | hybrid sensory histidine kinase BarA TERM 4131 3774239 - 3774215 - T 100 -9.3 -5.15526 | ATAGAAAACCAAAAA GGGCACAGC GAGATAA ACTGTGCCC TTGAGCTAGATGGAA gsrA 3775798 - 3774353 - | serine endoprotease dgt 3777516 - 3775996 - | deoxyguanosinetriphosphate triphosphohydrolase mtn 3777810 - 3778511 + | 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase btuF 3778511 - 3779353 + | vitamin B12-transporter protein BtuF yadS 3779353 - 3779967 + | hypothetical protein TERM 4132 3780006 - 3780029 + T 100 -8.8 -5.03715 | opp_overlap 3780006 TTTGAGCATAAAAAA CCGCTGCCAT TCTC ATGGTCGCGG TTTTTTAGCGATGCT TERM 4133 3780029 - 3780006 - T 89 -6.6 -5.31275 | opp_overlap 3780006 TTTGAGCATAAAAAA CCGCTGCCAT TCTC ATGGTCGCGG TTTTTTAGCGATGCT YPO3387 3780596 - 3780252 - | iron-sulfur cluster insertion protein ErpA yadQ 3782168 - 3780732 - | chloride channel protein TERM 4134 3781185 - 3781170 - G 71 -7.6 -4.0498 | GATAAAAATGAACAA CAGCAT GCCG ATGCTG AAATTACCGGCTGCC TERM 4135 3781425 - 3781409 - G 70 -3 -4.78597 | CTAATAATAAATAAA GCCAAA GGGTG TTTAGC GGAGCATCACTGAGT TERM 4136 3781622 - 3781603 - G 71 -11.4 -2.83522 | opp_overlap 3781604, overlap 3781602 AGCGGGGCATTAAAT GCCGCAGA CAGC CCTGCGGC TGCACCGGTTGCTAA TERM 4137 3783577 - 3783610 + G 73 -9 -3.69934 | gap 2, opp_overlap 3783572 3783577 CGCTAAAGAGGAGAA CATCCCACTG--GTGG TTAA CCACGTCGGTGGGATG TTTGGCCTATTCTTT hemL 3782549 - 3783829 + | glutamate-1-semialdehyde aminotransferase TERM 4138 3784082 - 3784099 + T 80 -9.9 -3.58343 | opp_overlap 3784076 3784075 GTCAATAACCTCTAA TCTCCTC TCCG GAGGAGA TTTCAGACTGCTGAC fhuB 3786200 - 3784203 - | iron-hydroxamate transporter permease subunit TERM 4139 3784249 - 3784237 - G 76 -3.3 -5.20222 | AGCAAATAAACAAAA TAGGG CGC CCCGA TAAATGTCGCTAATA fhuD 3787285 - 3786197 - | iron-hydroxamate transporter substrate-binding subunit TERM 4140 3787320 - 3787298 - R 75 -3.2 -5.12172 | overlap 3787299 3787302 CATTAATAAACAAAA CTTACCGGCG CAC CGCCAGCCGG GTGCGGTAAAATACC TERM 4141 3787316 - 3787302 - R 71 -9.2 -2.91398 | overlap 3787298 3787299 AATAAACAAAACTTA CCGGCG CAC CGCCAG CCGGGTGCGGTAAAA fhuC 3788079 - 3787285 - | iron-hydroxamate transporter ATP-binding subunit TERM 4142 3788378 - 3788345 - R 100 -8.7 -5.95539 | overlap 3788346 3788347 GCGCAAAGAAAAAAA TTGGCGGGCGCAGTC TGTA AACCACGCCCGCCGT CACATTTTATTGACC TERM 4143 3788377 - 3788346 - R 100 -12.2 -4.15696 | overlap 3788345 3788347 CGCAAAGAAAAAAAT TGGCGGGCGCAGTC TGTA AACCACGCCCGCCG TCACATTTTATTGAC TERM 4144 3788376 - 3788347 - R 100 -15.7 -3.07791 | overlap 3788346 3788345 GCAAAGAAAAAAATT GGCGGGCGCAGTC TGTA AACCACGCCCGCC GTCACATTTTATTGA mrcB 3790875 - 3788401 - | penicillin-binding protein 1b hrpB 3793542 - 3790984 - | ATP-dependent RNA helicase HrpB ligT 3793586 - 3794161 + | putative 2'-5' RNA ligase TERM 4145 3794575 - 3794564 - g 91 -4.4 -5.53288 | opp_overlap 3794564 GGCAATTGAAAAAAA TCAG ATTG CTGA ATTATCTGGTTACAA sfsA 3794274 - 3795011 + | sugar fermentation stimulation protein A dksA 3795181 - 3795636 + | DnaK transcriptional regulator DksA TERM 4146 3795706 - 3795664 - f 81 -10.7 -3.3676 | gap 1, opp_overlap 3795671, overlap 3795648 3795673 TGTAACACGGCATAA TGTGTAACACGGTGCCAGAG CCCT CTCCGGCACCGTGTTTGA-A CTGTTGGACCCCTTC TERM 4147 3795671 - 3795700 + F 100 -17.9 -3.66803 | opp_overlap 3795648 3795664 3795673 CGGCATAATGTGTAA CACGGTGCCAGAG CCCT CTCCGGCACCGTG TTTGAACTGTTGGAC TERM 4148 3795698 - 3795673 - f 100 -16.9 -3.07233 | opp_overlap 3795671, overlap 3795664 GCATAATGTGTAACA CGGTGCCAGAG CCCT CTCCGGCACCG TGTTTGAACTGTTGG yadB 3795916 - 3796881 + | glutamyl-Q tRNA(Asp) synthetase TERM 4149 3797013 - 3796992 - g 76 -5.7 -4.66537 | TCCGCGAAGACAAAA CGGTCCGTG ATGA CAAGGCCCG TAAAGATAAAGTGCC TERM 4150 3797881 - 3797843 - g 71 -6.7 -4.22948 | opp_overlap 3797845 AAAACCTATTTAAAA CTGTGCGAATACCAGCT TTTCC AGCCGCTATTCCCACTG ATTGCCCGTAATTTT pcnB 3796970 - 3798445 + | poly(A) polymerase I folK 3798453 - 3798932 + | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridin e pyrophosphokinase panB 3799198 - 3799998 + | 3-methyl-2-oxobutanoate hydroxymethyltransferase TERM 4151 3800234 - 3800248 + G 76 -2.8 -5.1356 | opp_overlap 3800223, overlap 3800236 AAACCCGCGCTGACG TGGTCG TGG TGACTA TTTTTGTTAATCCGC panC 3800086 - 3800940 + | pantoate--beta-alanine ligase TERM 4152 3801065 - 3801047 - f 78 -10.3 -3.2963 | AGCATTCCCCCATAA CGGGTTC GCTCG GAACCCG TGACCGCCGATGAGC panD 3801351 - 3801731 + | aspartate alpha-decarboxylase YPO3404 3803073 - 3801880 - | hypothetical protein TERM 4153 3802870 - 3802882 + g 91 -3.4 -5.75599 | CTTATTTAAATCGCC CAAC ATGTC GTTG TTTTTTTGTGCTTTA yadH 3804170 - 3803400 - | putative ABC transporter, integral membrane protein yadG 3805093 - 3804167 - | putative ABC transporter, ATP-binding protein TERM 4154 3805255 - 3805274 + H 70 -9.4 -2.75307 | opp_overlap 3805270, overlap 3805244 3805270 TTACCGAAACTACTG TTCCGATT TCAA AATCGGAA TCCTTGCCGTATATT TERM 4155 3805862 - 3805848 - g 79 -7.8 -4.57341 | opp_overlap 3805849 AAGCGCGGGCAAAAA GCCATG ATC CACGGC TGGGTATATGGTATT yadF 3805329 - 3805991 + | putative carbonic anhydrase YPO3408 3806681 - 3806145 - | hypoxanthine phosphoribosyltransferase TERM 4156 3806896 - 3806873 - R 100 -18.2 -5.24129 | CGGTTTTATAAAAAA CACCCCGGTC AACC GACCGGGGTG TGGCTCAGGCGCTGA yacK 3808502 - 3806901 - | multicopper oxidase yacC 3808819 - 3809166 + | hypothetical protein TERM 4157 3809381 - 3809371 - g 73 -3.2 -5.00616 | opp_overlap 3809375 3809376 TGTTCCGCGAAAAAA CCGA GCA TCAG GACCTGGTGATTTTT speE 3809283 - 3810173 + | spermidine synthase speD 3810251 - 3811045 + | S-adenosylmethionine decarboxylase TERM 4158 3811119 - 3811098 - f 89 -10.2 -3.94746 | TGATACGGAATTAAA GGTGATCG TTCAGG CGATCACC TAAAAACGGCTCGTC TERM 4159 3812027 - 3812043 + G 82 -7.9 -4.7373 | opp_overlap 3812023 TATATAGCCAAGGGC CAGGGGC GCT GCCACTG TTTTTAATCGCCTGC TERM 4160 3812241 - 3812218 - g 86 -5.2 -5.27477 | gap 1, opp_overlap 3812232 AGCGCAATGAAAAAA GGCAACG-CCA CAC TGGTCGCGGCC CTATCCTATTTCACG yddG 3811483 - 3812391 + | hypothetical protein YPO3414 3812861 - 3812502 - | hypothetical protein TERM 4161 3813087 - 3813107 + r 100 -13.9 -4.21194 | opp_overlap 3813069 3813087 TTTTTAAAATAGAAA CGGGAGGCC AAT GGCCCCCCG TTTTAGCTGATGCGA TERM 4162 3813107 - 3813087 - R 100 -16.1 -4.45168 | opp_overlap 3813087, overlap 3813069 TTTTTAAAATAGAAA CGGGAGGCC AAT GGCCCCCCG TTTTAGCTGATGCGA acnB 3815757 - 3813160 - | bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase TERM 4163 3815341 - 3815352 + g 71 -5.8 -4.28188 | TTTTGCATACGGATT GCCA GCTT TGGC TTTATCTTCTACGTC TERM 4164 3815358 - 3815374 + g 70 -9.5 -3.30124 | CAGCTTTGGCTTTAT CTTCTAC GTC GTAGAAG TTATCGAACATCAGC TERM 4165 3815635 - 3815650 + g 100 -6.8 -5.2189 | overlap 3815637 TAATAGGAATTCTTC TTCGCC CGCA GGCGGA TTTTTTAATGATTCA TERM 4166 3816253 - 3816221 - R 100 -11.3 -4.16943 | opp_overlap 3816228, overlap 3816225 3816227 3816228 GCGTATAGGCTAAAA TAAATATCCTCCGGC ATA GCCGGAGGTTTTTCA TATGCGCCTATAAGG TERM 4167 3816249 - 3816225 - R 100 -9.9 -4.67651 | opp_overlap 3816228, overlap 3816221 3816227 3816228 ATAGGCTAAAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCATATGCGCCTAT TERM 4168 3816247 - 3816227 - R 100 -12.5 -3.94471 | opp_overlap 3816228, overlap 3816225 3816221 3816228 AGGCTAAAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 4169 3816228 - 3816246 + r 100 -16 -4.8048 | opp_overlap 3816227 3816225 3816221 3816228 GGCTAAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 4170 3816246 - 3816228 - R 100 -16 -2.95598 | opp_overlap 3816228, overlap 3816227 3816225 3816221 GGCTAAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC tnp 3816785 - 3816327 - | transposase for the IS1541 insertion element TERM 4171 3816898 - 3816916 + r 100 -16 -4.36914 | opp_overlap 3816898 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 4172 3816916 - 3816898 - R 100 -16 -3.07307 | opp_overlap 3816898 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 4173 3816956 - 3816937 - R 100 -11.4 -5.93809 | opp_overlap 3816937 TGGGCACAAAAAAAA CGGCCCCT ATGT AGGGACCG TTTCACTTTTATTTA TERM 4174 3816937 - 3816956 + r 83 -9.2 -4.02396 | opp_overlap 3816937 TGGGCACAAAAAAAA CGGCCCCT ATGT AGGGACCG TTTCACTTTTATTTA lpdA 3818455 - 3817028 - | dihydrolipoamide dehydrogenase TERM 4175 3817541 - 3817531 - G 76 -5.4 -4.81551 | opp_overlap 3817531 3817535 CACCGATAGCAAAAA TGTG TGG CACA TTGGTGCGCAGTTGC TERM 4176 3818753 - 3818729 - R 100 -17.2 -3.54743 | opp_overlap 3818725, overlap 3818714 3818732 3818744 GAGCAGTAACCACAA CAAGGCCGGC ACGAA GCCGGCCTTG GCGATTACATCACCA TERM 4177 3818750 - 3818732 - R 100 -13.1 -3.90241 | opp_overlap 3818725, overlap 3818729 3818714 3818744 CAGTAACCACAACAA GGCCGGC ACGAA GCCGGCC TTGGCGATTACATCA aceF 3820287 - 3818758 - | dihydrolipoamide acetyltransferase TERM 4178 3819987 - 3820020 + g 100 -6.6 -5.25772 | gap 1 TTTTCGCCGCAGAGG CTGCCGGAGCC-GCT ACCTG AGCAGGCGCCGCCGG TTTTTCTTCTGCTTT aceE 3822964 - 3820301 - | pyruvate dehydrogenase subunit E1 pdhR 3823924 - 3823160 - | transcriptional regulator PdhR TERM 4179 3823885 - 3823862 - G 72 -9.6 -3.36273 | opp_overlap 3823866 CCCTTCCAAGATCAA GTATTCGAGC TGCT GCTCGATTAC ATCTGATAGTTTGGG TERM 4180 3824238 - 3824212 - H 71 -6.8 -4.08689 | overlap 3824208 CATTTAATAATTAAA TTTAAATTCATA TTT TTTGAATTTAAA TTCACACTTAACTAA TERM 4181 3824991 - 3825026 + G 70 -8.4 -3.72141 | gap 1, opp_overlap 3825003 CAGCTAGGCGAAATG GTGGTTGAA-GAACCTG TAG CCGGTTCCTTTAGCCAC TTTGCGTATAAATAT TERM 4182 3825265 - 3825285 + G 74 -4.7 -4.88405 | opp_overlap 3825265 3825268, overlap 3825250 3825260 TTGCCATCATTAAAG TGATCGCGA TTA TTGCGATGA TTTTATTTGGCGGTT aroP 3824787 - 3826184 + | aromatic amino acid transport protein TERM 4183 3826259 - 3826220 - T 100 -14.4 -3.06312 | gap 1, opp_overlap 3826224 AAATCCGCTAGTTAA CCCTA-CCTAGGCCAGCAC TTA GTGCTGGCCTAGGCTATTG ACAAAGTACCTATGG TERM 4184 3826224 - 3826254 + T 100 -19.8 -3.02511 | opp_overlap 3826220 CCGCTAGTTAACCCT ACCTAGGCCAGCAC TTA GTGCTGGCCTAGGC TATTGACAAAGTACC ampE 3827456 - 3826602 - | regulatory protein AmpE TERM 4185 3827289 - 3827267 - G 74 -3.5 -4.94058 | overlap 3827262 3827269 GGAAGCCAAACAAAA TATTTTGCA CTAAT TGCAAAATC CCCCAAACCAGCACC ampD 3828297 - 3827746 - | N-acetyl-anhydromuranmyl-L-alanine amidase nadC 3828410 - 3829318 + | quinolinate phosphoribosyltransferase TERM 4186 3829491 - 3829479 - f 79 -3.3 -5.30155 | overlap 3829480 GTATGAATTAAAAAA CGGCA CCC TGCCT CCAGTTTCTTAAACA ppdD 3829521 - 3829985 + | putative major pilin subunit hofB 3829978 - 3831516 + | hypothetical protein hofC 3831513 - 3832712 + | type IV pilin biogenesis protein guaC 3834182 - 3833139 - | guanosine 5'-monophosphate oxidoreductase YPO3429 3834223 - 3834468 + | hypothetical protein coaE 3834478 - 3835098 + | dephospho-CoA kinase YPO3431 3835095 - 3835847 + | hypothetical protein TERM 4187 3836089 - 3836112 + G 76 -3.1 -5.06414 | AAAAGTCGTTATCTG GGGTGAACA AAGCCC TTTTCGCCC TTTTTGTTGCAAGCG YPO3432 3836033 - 3836239 + | zinc-binding protein TERM 4188 3836351 - 3836327 - T 88 -9.9 -4.15222 | opp_overlap 3836330, overlap 3836329 3836330 ATGTGTTTTAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCATATGCGCCTAT TERM 4189 3836349 - 3836329 - T 100 -12.5 -3.6761 | opp_overlap 3836330, overlap 3836327 3836330 GTGTTTTAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 4190 3836348 - 3836330 - T 100 -16 -2.80244 | opp_overlap 3836330, overlap 3836329 3836327 TGTTTTAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 4191 3836330 - 3836348 + T 100 -16 -4.8048 | opp_overlap 3836330 3836329 3836327 TGTTTTAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC tnp 3836887 - 3836429 - | transposase for the IS1541 insertion element TERM 4192 3836976 - 3836994 + H 100 -13.2 -4.01078 | CCAGGGGGTAATCTG CTCTCCTG ATT CAGGAGAG TTTATGGTCACTTTT y1093 3836998 - 3838020 + | transposase for insertion sequence IS100 TERM 4193 3838101 - 3838087 - g 77 -11.4 -3.3506 | overlap 3838078 TGGAAAGCCTTATAA GCGCAG CGC CTGCGC TGTCACAACAGGCAG YPO3435 3838017 - 3838799 + | transposase/IS protein TERM 4194 3838964 - 3838989 + T 90 -11.3 -3.68619 | TAACTCTGAGCGGTT TTGCATCAGAG CATC CTCTGATGTAA TTTCAGTAAATTCCA YPO3437 3841862 - 3839952 - | hypothetical protein TERM 4195 3840255 - 3840233 - G 83 -9.2 -4.4261 | opp_overlap 3840233, overlap 3840242 CTGGTAAGAGTAAAA TTGACGCAAC ATG ATTGCGCCAA TCTTGAAATTCCTGC TERM 4196 3841572 - 3841538 - G 70 -8 -3.70902 | gap 1 CTCGGTACAGGCAAA TCAGCAACAGTGTCA AGGAAG TGAC-CCGCTGCTGA CCATCAATTAAGTAG TERM 4197 3841999 - 3841975 - R 100 -8 -5.39755 | CACAATTAGAAAAAA TAAGGCATAT CAGAT ACATGCCTTA CAGAAACTTTTTTTA intB 3843275 - 3842016 - | integrase TERM 4198 3842254 - 3842233 - G 70 -8.7 -3.57128 | overlap 3842248 ATCAATGAACTACAA GCCATGGTT CTGA AACCGTGGC CACAGACTTCAACTT TERM 4199 3843457 - 3843442 - R 91 -6.8 -5.47218 | opp_overlap 3843442 TTTTAGGCAAAAAAA GCCACC TTGC GGTGAC TTAATTTTCATACTA YPO3439 3844739 - 3843663 - | hypothetical protein TERM 4200 3844121 - 3844138 + g 73 -3.4 -5.0095 | gap 1 AATCAGATTCATCGA CCT-GCG ATAAC CGCCAGG TTTTATTGTCTTTTT YPO3440 3845833 - 3844739 - | hypothetical protein pepA 3846113 - 3847624 + | leucyl aminopeptidase TERM 4201 3847738 - 3847755 + F 95 -11.3 -3.80625 | TTGTTAGCAGTCTGA GGGCACA TTTT TGTGCCC TTTACGTTGTAGAGA holC 3847775 - 3848224 + | DNA polymerase III subunit chi valS 3848237 - 3851134 + | valyl-tRNA synthetase TERM 4202 3851161 - 3851199 + F 100 -14.7 -4.66833 | overlap 3851162 ATCAGTCAGTCGTCA CCAGGGGCCATGATAAT TATTC ACTATCATGGCCCCTGC TTTTTACCATTGCAC TERM 4203 3851162 - 3851198 + F 100 -18.2 -3.39618 | overlap 3851161 TCAGTCAGTCGTCAC CAGGGGCCATGATAAT TATTC ACTATCATGGCCCCTG CTTTTTACCATTGCA YPO3444 3851277 - 3851780 + | putative acetyltransferase YPO3445 3852718 - 3852287 - | hypothetical protein argI 3852930 - 3853937 + | ornithine carbamoyltransferase subunit I YPO3447 3854702 - 3854244 - | hypothetical protein TERM 4204 3855066 - 3855040 - H 84 -10.1 -3.82218 | gap 1, opp_overlap 3855049, overlap 3855041 3855056 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 4205 3855067 - 3855041 - H 72 -10.1 -2.88849 | gap 1, opp_overlap 3855049, overlap 3855040 3855056 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT TERM 4206 3855149 - 3855165 + H 75 -5.2 -4.79352 | CAATAACCTCATCAT TATTCC TTTAC GGAATA TTTTATTATCACTAA TERM 4207 3857021 - 3857052 + G 76 -4.3 -4.94243 | opp_overlap 3857021 3857023 3857026, overlap 3857023 3857026 GTCTGTAGCATTAAA TACCACGCCGGGA ACCCCC TCCCGGCGTCATC TTTTGGTTTTTTTAC TERM 4208 3857050 - 3857023 - g 72 -9.8 -3.48024 | opp_overlap 3857021 3857023 3857026, overlap 3857021 3857026 CTGTAGCATTAAATA CCACGCCGGGAA CCCC CTCCCGGCGTCA TCTTTTGGTTTTTTT TERM 4209 3857047 - 3857026 - g 80 -13.7 -2.88215 | opp_overlap 3857023 3857021 3857026, overlap 3857023 3857021 TAGCATTAAATACCA CGCCGGGAA CCCC CTCCCGGCG TCATCTTTTGGTTTT TERM 4210 3857026 - 3857047 + G 78 -13 -3.01018 | opp_overlap 3857026 3857023 3857021, overlap 3857023 3857021 TAGCATTAAATACCA CGCCGGGA ACCCCC TCCCGGCG TCATCTTTTGGTTTT YPO3450 3857004 - 3858053 + | putative transporter, permease protein YPO3451 3858072 - 3858908 + | putative transporter, permease protein TERM 4211 3859326 - 3859293 - g 79 -11.7 -3.28712 | opp_overlap 3859295, overlap 3859295 TCTGTTGCTGCATAA CACCCTTTCAAGCGC TGAT GCGCATGAACGGGTA TTAAATGCACTGGCC TERM 4212 3859295 - 3859324 + G 77 -12.1 -3.09327 | opp_overlap 3859293 3859295 TGTTGCTGCATAACA CCCTTTCAAGCGC TGAT GCGCATGAACGGG TATTAAATGCACTGG TERM 4213 3859324 - 3859295 - g 79 -12.1 -3.21276 | opp_overlap 3859295, overlap 3859293 TGTTGCTGCATAACA CCCTTTCAAGCGC TGAT GCGCATGAACGGG TATTAAATGCACTGG YPO3452 3858901 - 3859779 + | putative ABC transporter transporter, ATP-binding protein YPO3453 3859781 - 3860482 + | putative ABC transporter, ATP-binding protein TERM 4214 3860687 - 3860674 - f 75 -5.3 -4.82901 | CCCTCGCCATAAAAA TCACA ATTC TGTGA CGTACTGAACAGGGA TERM 4215 3860847 - 3860870 + F 78 -10.2 -3.24245 | overlap 3860850 AGCATCCACATCCCC CTCGCAGCCC TGAT GTGCTGCGGG TTGCCTTGTGGATAA TERM 4216 3861888 - 3861878 - g 76 -6.8 -4.56597 | GGGCTTGGGTAAAAA CCGT AAA ACGG CGGTATTCCCAAAAC nrdD 3860916 - 3863054 + | anaerobic ribonucleoside triphosphate reductase TERM 4217 3863166 - 3863137 - f 74 -9.2 -3.33492 | GTAGGTAGGCGACAA CCTCAGGCCTCG TCAATG CGAGGCCTGCTG ATGGGCTGAGTCACC nrdG 3863261 - 3863695 + | anaerobic ribonucleotide reductase-activating protein phnF 3864023 - 3864748 + | putative transcriptional regulator TERM 4218 3864906 - 3864924 + G 87 -8 -4.79352 | overlap 3864907 AATTGCAGGCGCGGA TGGGGGCC ACC GGCCGCCG TTTTATTCTCGGTGA phnG 3864749 - 3865225 + | PhnG protein phnH 3865225 - 3865851 + | carbon-phosphorus lyase complex subunit phnI 3865851 - 3867029 + | PhnI protein phnJ 3867022 - 3867903 + | PhnJ protein phnK 3867903 - 3868694 + | phosphonates transport ATP-binding protein TERM 4219 3868873 - 3868842 - f 100 -12.4 -3.5393 | AGGACGTCGGCGAAA GGCGTCAACCTACA GGGA TGTAGGTTAAAGCC AGCCCGTAAAGCCGA TERM 4220 3868918 - 3868906 - f 71 -9.1 -3.30605 | opp_overlap 3868904 AGATGAAGAAGGGAA CCCAC GTA GTGGG CGTTGGATGTTGAGC TERM 4221 3868946 - 3868971 + F 81 -11.9 -2.52543 | gap 1, opp_overlap 3868938 3868937 AGCAAAGCCGCAGGT GCAGGAGGGGCG GCC TGCCC-TCCTGC TCGATTGCAGGCACT TERM 4222 3869697 - 3869686 - g 71 -7.2 -4.02051 | opp_overlap 3869686 3869685 3869694 GATGAAGCTAAACAA CGCG GTGC CGCG ATTGTCGGGATTTTC phnL 3869083 - 3869802 + | phosphonates transport ATP-binding protein phnM 3869799 - 3870935 + | PhnM protein phnN 3870935 - 3871516 + | ribose 1,5-bisphosphokinase phnP 3871507 - 3872259 + | carbon-phosphorus lyase complex accessory protein YPO3466 3872910 - 3872272 - | hypothetical protein YPO3467 3873505 - 3873062 - | hypothetical protein YPO3468 3874770 - 3873604 - | hypothetical protein TERM 4223 3874662 - 3874648 - G 73 -9.2 -3.67597 | CGCTTCACTCAATAA CCGACG TAA CGCCGG TTGCAGAGGTGAAAA YPO3469 3875879 - 3874785 - | putative sugar ABC transporter, ATP-binding protein TERM 4224 3874924 - 3874914 - G 70 -8.2 -3.77209 | overlap 3874915 AAATACAGAGGTAAA GCGG CCC CCGC CCGTGCTGCAAAAGA TERM 4225 3875527 - 3875515 - G 70 -9.1 -3.5393 | opp_overlap 3875513 AGCAGCGCTTGTAAA CCGAG CAA CTCGG CGGTTGATTCGACCT TERM 4226 3875529 - 3875541 + g 71 -5.5 -4.4773 | ACCGAGCAACTCGGC GGTTG ATT CGACC TTTTGGTTAATATCA YPO3470 3876730 - 3875891 - | sugar transport system, permease protein TERM 4227 3876756 - 3876766 + r 77 -4.6 -5.03314 | CGGCTCGGTTAGTAA CGGG CGA TCCG TTTTTTCAAGGTGAG YPO3471 3877633 - 3876749 - | sugar transport system, permease protein TERM 4228 3877400 - 3877376 - G 72 -8.5 -3.95653 | AAAGAAGGCGATAAA CGCGGCCACCA CCA TGGTGACCAGG ACATATAACAACGTG YPO3472 3878954 - 3877641 - | putative sugar binding protein YPO3473 3879512 - 3880738 + | hypothetical protein TERM 4229 3882605 - 3882619 + G 76 -5.6 -4.75174 | overlap 3882607 ACCAACAACCAGCAG CTCAGG TCA CCTGTG TTTTTGACTTGAATG YPO3474 3880762 - 3882780 + | hypothetical protein TERM 4230 3883263 - 3883247 - g 100 -8 -5.32396 | ACAGCAAAAAGAAAA GCTGGT GATTG ACCAGC CGAGGTTATTGACAA YPO3475 3883011 - 3883298 + | GIY-YIG nuclease superfamily protein YPO3476 3883979 - 3883473 - | putative acetyltransferase YPO3477 3884494 - 3883973 - | putative lipid carrier protein YPO3478 3884575 - 3884700 + | hypothetical protein TERM 4231 3884853 - 3884879 + G 71 -7.3 -4.11295 | gap 1, opp_overlap 3884852 3884851, overlap 3884871 TACCTGCATTAAAGG CCGCAATCGACA ATGG TGCCGAT-GCGG TTTATATCGGTTTGA YPO3479 3884810 - 3885805 + | putative protease YPO3480 3885817 - 3886695 + | hypothetical protein TERM 4232 3886711 - 3886755 + T 100 -16 -4.183 | gap 1, opp_overlap 3886718 3886721, overlap 3886718 ACGGCCTTGCCTTAT CAAGTAATAACAGGGAGGTCA TTGC TGGCCTCCCTGTTATT-CATG TTTATTAACGCTTAA TERM 4233 3886718 - 3886749 + T 100 -18.2 -3.54382 | opp_overlap 3886718 3886721, overlap 3886711 TGCCTTATCAAGTAA TAACAGGGAGGTCA TTGC TGGCCTCCCTGTTA TTCATGTTTATTAAC TERM 4234 3886749 - 3886718 - T 100 -16 -3.39895 | opp_overlap 3886718 3886711, overlap 3886721 TGCCTTATCAAGTAA TAACAGGGAGGTCA TTGC TGGCCTCCCTGTTA TTCATGTTTATTAAC TERM 4235 3886746 - 3886721 - T 100 -13.3 -3.83844 | opp_overlap 3886718 3886711, overlap 3886718 CTTATCAAGTAATAA CAGGGAGGTCA TTGC TGGCCTCCCTG TTATTCATGTTTATT ibeB 3888242 - 3886836 - | probable outer membrane efflux lipoprotein TERM 4236 3887794 - 3887812 + g 83 -3 -5.41143 | opp_overlap 3887794 3887797, overlap 3887795 AGATAGGTTTCAAAT TCAGCATG AGA CAAGCTGC TTTTTTTACCAAATA TERM 4237 3887965 - 3887999 + g 81 -13.6 -3.1247 | gap 1 ACCGTTGGTATCTGG GCGGCCCGTTGCACA CCATAT TGCGCA-CGGGCCGC TTCGATATCGGCAAT YPO3482 3891369 - 3888244 - | multidrug efflux protein TERM 4238 3889703 - 3889690 - G 73 -5.9 -4.56597 | TTCGGTCGGTAAAAA GCCCG TTGG CAGGC GAATAAACAACACAC YPO3483 3892533 - 3891373 - | multidrug efflux protein TERM 4239 3892066 - 3892076 + g 70 -2.4 -5.00884 | opp_overlap 3892053 GATACGCGCCGTTTC CAGC GCA GCAG TTTTTTCGGCCACAT TERM 4240 3892118 - 3892150 + g 70 -2 -4.9138 | TGCTGATAGCTGGTT TGG-GCGTCATCAGCA TCT TGCTGC-GACACACCA TTTTCTTTGGCTAAT YPO3484 3893041 - 3894096 + | hypothetical protein TERM 4241 3894148 - 3894133 - T 100 -10.4 -5.61596 | opp_overlap 3894133 ACCGCCATAAAAAAA CCAGCC CGAA GGCTGG TTTGAGGTTGTTGAC TERM 4242 3894133 - 3894148 + T 82 -10.4 -3.72051 | opp_overlap 3894133 ACCGCCATAAAAAAA CCAGCC CGAA GGCTGG TTTGAGGTTGTTGAC TERM 4243 3894228 - 3894254 + T 72 -10.1 -2.88849 | gap 1, opp_overlap 3894217, overlap 3894223 3894229 ACATCCATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCTCTGCC TERM 4244 3894229 - 3894255 + T 84 -10.1 -3.82218 | gap 1, opp_overlap 3894217, overlap 3894223 3894228 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCTCTGCCT TERM 4245 3894319 - 3894334 + T 100 -10.4 -4.82855 | TGTCAGCAGTCTGAA CCAGCC CGAA GGCTGG TTTTTACGTTTAATC YPO3485 3894662 - 3894351 - | putative transcriptional regulatory protein YPO3486 3895054 - 3894686 - | hypothetical protein YPO3487 3895270 - 3895097 - | hypothetical protein TERM 4246 3895238 - 3895253 + g 100 -10.4 -4.82855 | opp_overlap 3895238 ATAGCCATAAAAAAA CCAGCC CGAA GGCTGG TTTTTACGTTTAATC TERM 4247 3895253 - 3895238 - G 100 -10.4 -5.65177 | opp_overlap 3895238 ATAGCCATAAAAAAA CCAGCC CGAA GGCTGG TTTTTACGTTTAATC deaD 3897284 - 3895290 - | ATP-dependent RNA helicase DeaD TERM 4248 3896493 - 3896511 + g 72 -3.8 -4.7497 | ACGCTCAAGGGCTTC TGCTACTT CCA AGGTCGCA TTTTTGGTACGTACG nlpI 3898355 - 3897471 - | lipoprotein NlpI TERM 4249 3897591 - 3897603 + g 73 -9.1 -3.78934 | opp_overlap 3897590 CGTCAGTTTGAACAG CACCG AAG CGGTG TTCTTGTCCCCCAGA TERM 4250 3898468 - 3898437 - R 100 -13.8 -3.48276 | opp_overlap 3898434 CCGCCCCTGAGATAA CACAGCCCCTTACC GATG AGCAAGGAGCTGTG GAATGACTTAATTAC TERM 4251 3898487 - 3898524 + r 100 -11.3 -4.0274 | TGACTTAATTACTCT GCTGCTGCTTCTGGTGC TTCT GCGTCAGGAGTAGTGGC TTCTTTGATGCTCAG pnp 3900597 - 3898480 - | polynucleotide phosphorylase/polyadenylase TERM 4252 3900883 - 3900901 + r 77 -11 -2.73735 | overlap 3900876 3900893 3900895 TGCTTTTCTACCTGA GTCCGGTA TTC TGCCGGAC TCATTCCGCCTGTTT YPO3491 3901649 - 3900864 - | transposase for insertion sequence IS1661 YPO3492 3902218 - 3901703 - | insertion element IS1661 DNA-binding protein TERM 4253 3902269 - 3902223 - R 100 -15.4 -3.05384 | gap 1, opp_overlap 3902229 3902261, overlap 3902228 3902249 GGGTGTTTCATTGAA CCGAACCTCCAGATCATGGAT AAAAAG ATCCAAGATCTGG-GGTTCAG TGCAACTTGGCCCCT TERM 4254 3902264 - 3902228 - R 77 -10.3 -3.19192 | gap 1, opp_overlap 3902229 3902261, overlap 3902223 3902249 TTTCATTGAACCGAA CCTCCAGATCATGGAT AAAAAG ATCCAAGATCTGG-GG TTCAGTGCAACTTGG TERM 4255 3902229 - 3902264 + r 93 -12.7 -3.06831 | opp_overlap 3902228 3902223 3902249, overlap 3902261 TTCATTGAACCGAAC CTCCAGATCATGGAT AAAAAG ATCCAAGATCTGGGG TTCAGTGCAACTTGG TERM 4256 3902259 - 3902249 - R 75 -5.4 -4.88736 | opp_overlap 3902229, overlap 3902228 3902223 GATCATGGATAAAAA GATC CAA GATC TGGGGTTCAGTGCAA rpsO 3902574 - 3902305 - | 30S ribosomal protein S15 TERM 4257 3902682 - 3902699 + r 91 -6.9 -5.56263 | opp_overlap 3902685, overlap 3902685 TCGCGGGATCGCAAG GCAGGCC GTGT GGCCTAC TTTTTATTTTCTACT truB 3903670 - 3902696 - | tRNA pseudouridine synthase B rbfA 3904080 - 3903670 - | ribosome-binding factor A TERM 4258 3904094 - 3904125 + r 81 -10.8 -3.36515 | opp_overlap 3904097, overlap 3904092 3904095 ATTTGGATTCTCCAG ACAGTTTGGGGGGC CAAG GCCCCCCAAATGGA TATTTGCAAATCAGA TERM 4259 3904095 - 3904124 + r 95 -14.3 -2.61695 | opp_overlap 3904097, overlap 3904094 3904092 TTTGGATTCTCCAGA CAGTTTGGGGGGC CAAG GCCCCCCAAATGG ATATTTGCAAATCAG TERM 4260 3904122 - 3904097 - R 93 -13.3 -2.87931 | opp_overlap 3904095 3904094 3904092 TGGATTCTCCAGACA GTTTGGGGGGC CAAG GCCCCCCAAAT GGATATTTGCAAATC infB 3906800 - 3904146 - | translation initiation factor IF-2 TERM 4261 3906315 - 3906328 + g 76 -3.1 -5.19261 | ACGTGCTTTATCGGT CTGAG CTGG CTTAG TTTTTTCGTCGGTTT nusA 3908312 - 3906825 - | transcription elongation factor NusA YPO3498 3908786 - 3908334 - | hypothetical protein TERM 4262 3908824 - 3908811 - R 100 -8.1 -5.80248 | CAAGACATAAAAAAA GGGCT TAAT AGCCC AGTGATTCTGCTGTC TERM 4263 3908874 - 3908846 - R 100 -12.5 -3.90744 | opp_overlap 3908852 3908853, overlap 3908853 TCTGCTGTCAAATAA CAAAAAACCCCGA AAT TCGGGGCTTTATG CAACTGGACCCTGTT TERM 4264 3908852 - 3908868 + r 72 -7.9 -3.87815 | opp_overlap 3908846 3908853, overlap 3908853 GTCAAATAACAAAAA ACCCCGA AAT TCGGGGC TTTATGCAACTGGAC TERM 4265 3908853 - 3908867 + r 83 -11.4 -2.92475 | opp_overlap 3908853 3908846, overlap 3908852 TCAAATAACAAAAAA CCCCGA AAT TCGGGG CTTTATGCAACTGGA TERM 4266 3908867 - 3908853 - R 100 -11.4 -5.72254 | opp_overlap 3908852 3908853, overlap 3908846 TCAAATAACAAAAAA CCCCGA AAT TCGGGG CTTTATGCAACTGGA TERM 4267 3908891 - 3908903 + r 76 -10.5 -3.06501 | AACTGGACCCTGTTT GCCGC AAA GCGGC TTCGGTGCAACTCTC TERM 4268 3909003 - 3908989 - R 100 -7.2 -5.79526 | opp_overlap 3908991 ACATTTGAAAAAAAA CACTTT AGG AAAGTG GTTGCGGGGGCCGGA TERM 4269 3909238 - 3909268 + r 74 -9.9 -3.08603 | opp_overlap 3909236, overlap 3909237 GGCACTGATTCAACT GGTTGTTTTTACT GTCCA AGTAACAACAACC CTTTTAAAACTCTTT secG 3909653 - 3909318 - | preprotein translocase subunit SecG TERM 4270 3909843 - 3909863 + r 83 -11.1 -3.53761 | TCAGCGTAATTTCTT GGGGAAGAG TGC CTCTCCCCC TTTAAAAAAGGGTTA glmM 3911216 - 3909876 - | phosphoglucosamine mutase TERM 4271 3910327 - 3910317 - G 71 -6.8 -4.24342 | opp_overlap 3910316 TTTGGCACGAACAAA TGGG ATA CCCA GATCTTTCAGGGCTA folP 3912059 - 3911226 - | dihydropteroate synthase TERM 4272 3912118 - 3912135 + r 90 -11.3 -3.71284 | opp_overlap 3912118 TTAGCAACAAAAAAA CCCTAGG CAAG CCTAGGG TTATATTAGTCACAA TERM 4273 3912135 - 3912118 - R 100 -11.3 -5.84381 | opp_overlap 3912118 TTAGCAACAAAAAAA CCCTAGG CAAG CCTAGGG TTATATTAGTCACAA hflB 3914113 - 3912179 - | ATP-dependent metalloprotease TERM 4274 3914025 - 3914007 - G 72 -8.2 -3.83205 | ACGTCGGACATGAAA GTAGAGTA ATC CACTCTAC GGCCATTCGATTCGC rrmJ 3914799 - 3914170 - | 23S rRNA methyltransferase J YPO3504 3914946 - 3915239 + | hypothetical protein TERM 4275 3915261 - 3915271 + T 74 -6.8 -4.35483 | opp_overlap 3915260 3915261 TTGTTTTAGAGAAAG GTGC CAT GCAC TTTGTTCTGATAAAA TERM 4276 3915281 - 3915306 + T 100 -10.5 -4.88405 | opp_overlap 3915287, overlap 3915282 ATGCACTTTGTTCTG ATAAAAGGCCG CTTG CGGCCTTTTAC TTTTCTTTACAACTT TERM 4277 3915282 - 3915305 + T 100 -14 -3.51958 | opp_overlap 3915287, overlap 3915281 TGCACTTTGTTCTGA TAAAAGGCCG CTTG CGGCCTTTTA CTTTTCTTTACAACT TERM 4278 3915300 - 3915287 - T 88 -9.5 -4.36914 | opp_overlap 3915282 3915281 TTTGTTCTGATAAAA GGCCG CTTG CGGCC TTTTACTTTTCTTTA greA 3915843 - 3915367 - | transcription elongation factor GreA TERM 4279 3915694 - 3915709 + g 72 -4 -4.88918 | gap 1, overlap 3915686 TTGTTGCTCACGGGC TGCGTGA TAT TC-CGCA TTTTCTTTCAAGTCG TERM 4280 3915978 - 3915958 - H 100 -3.9 -6.5058 | ATAAACAAAAAAAAA CCTAGGGCC AAA AACCCCAAG TCAGGATCAATTTTG TERM 4281 3917050 - 3917031 - g 70 -2.2 -5.03715 | gap 1 ATCATGCTGAAAAAA TCAGACAAT ATG ATCG-CTGA CACCGTCTTCAGAAC dacB 3916101 - 3917549 + | D-alanyl-D-alanine carboxypeptidase/endopeptidase basR 3917555 - 3918217 + | DNA-binding transcriptional regulator BasR basS 3918214 - 3919281 + | sensor protein BasS/PmrB TERM 4282 3919354 - 3919323 - T 100 -9.5 -5.0133 | CACCCTGCCAAAAAA TAAGGGCCACCAC GAAAAA ATGGCAGCCCTTA TTCAAAGAATAACTG obgE 3920548 - 3919376 - | GTPase ObgE TERM 4283 3920572 - 3920597 + r 79 -6.9 -4.62441 | gap 1, opp_overlap 3920568, overlap 3920572 TCCGTAAATCATTCA CC-GGCTGCTTT TGC AAAGCAACCAGG TTTATTTCTGTCCGA YPO3510 3921535 - 3920549 - | hypothetical protein TERM 4284 3921594 - 3921572 - R 100 -12 -4.84529 | opp_overlap 3921572 CCAGAAATGTAAAAA GCCCCGCAAC GAA ATTGCAGGGC TTACATCTATTTACA rpmA 3921880 - 3921623 - | 50S ribosomal protein L27 rplU 3922211 - 3921900 - | 50S ribosomal protein L21 ispB 3922471 - 3923442 + | octaprenyl diphosphate synthase TERM 4285 3923488 - 3923470 - T 89 -10.3 -3.96224 | opp_overlap 3923470 GAAATTATTTAGAAA CCCGGAT TCACC ATCCGGG TTTATCCCATTAATG TERM 4286 3923470 - 3923488 + T 89 -10.3 -3.93236 | opp_overlap 3923470 GAAATTATTTAGAAA CCCGGAT TCACC ATCCGGG TTTATCCCATTAATG YPO3514 3923940 - 3923539 - | hypothetical protein TERM 4287 3923937 - 3923927 - G 74 -2.6 -5.16969 | GACACAAAAAAGAAA TTTT TAG AAAA CATTTAAATTTTTTT YPO3515 3924370 - 3924176 - | hypothetical protein TERM 4288 3924443 - 3924475 + r 95 -7.8 -5.08178 | opp_overlap 3924443 ATCATTACAATATCA GGGGCTACTG TTCGTACTCTTTT CAGTAGCCCC TTTTTATCTCTATAT TERM 4289 3924729 - 3924714 - R 74 -10.4 -2.59431 | overlap 3924710 GCCTCGCAGAAGCGA GGCCCA TGGA TGGGCC GAGTAACGCTTGCAG mdh 3925717 - 3924779 - | malate dehydrogenase argR 3926181 - 3926651 + | arginine repressor TERM 4290 3926698 - 3926680 - f 75 -7.4 -4.3129 | opp_overlap 3926680 CACCGAGCAGTAAAA TGCGGC CTTATGT GCCGCA TTATCTCACCCTCGC YPO3518 3927040 - 3927303 + | hypothetical protein TERM 4291 3927407 - 3927433 + T 72 -10.1 -2.88849 | gap 1, opp_overlap 3927396, overlap 3927402 3927408 ACATCCATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCTCTGCC TERM 4292 3927408 - 3927434 + T 84 -10.1 -3.82218 | gap 1, opp_overlap 3927396, overlap 3927402 3927407 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCTCTGCCT TERM 4293 3927497 - 3927520 + T 85 -9.6 -4.12188 | overlap 3927499 TTGTCAGCAGTCTGC AATGCCCCAT TAAC ATGGGGCATA TTTTCAAGATGATGA TERM 4294 3927499 - 3927518 + T 93 -12.2 -3.6581 | overlap 3927497 GTCAGCAGTCTGCAA TGCCCCAT TAAC ATGGGGCA TATTTTCAAGATGAT mpl 3928981 - 3927599 - | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-m e so-diaminopimelate ligase TERM 4295 3929427 - 3929437 + G 73 -5.4 -4.72272 | opp_overlap 3929427 3929425 CTCCGAAGAAGAAGA TGAC ATT GTCA TTTTTGATGGCGGAA TERM 4296 3930116 - 3930106 - g 73 -5.4 -4.63218 | TTCGTGGGAACAAAA TCCA TGG TGGA AGATGCGGAAGGGTT fbp 3929152 - 3930165 + | fructose-1,6-bisphosphatase TERM 4297 3930205 - 3930225 + F 100 -11.1 -5.72622 | opp_overlap 3930197 3930205 TCAAAAATAAGCTAA CAGCGGCCT TTT AAGCCGCTG TTTTTTATTTCTAAC TERM 4298 3930225 - 3930205 - f 100 -13.3 -3.40836 | opp_overlap 3930205, overlap 3930197 TCAAAAATAAGCTAA CAGCGGCCT TTT AAGCCGCTG TTTTTTATTTCTAAC ppa 3930365 - 3930892 + | inorganic pyrophosphatase TERM 4299 3930917 - 3930968 + T 100 -9.4 -5.84381 | gap 1, opp_overlap 3930917 3930935 TCGCCTATAAAAAAA CACCGCCTATCGTGAACAGGCCCCA AAA TAGGGCC-GTTTACCTTGTGCGGTG TTTTTTTGTTACTGC TERM 4300 3930968 - 3930917 - T 100 -7.2 -5.60993 | gap 1, opp_overlap 3930917, overlap 3930935 TCGCCTATAAAAAAA CACCGCCTATCGTGAACAGGCCCCA AAA TAGGGCC-GTTTACCTTGTGCGGTG TTTTTTTGTTACTGC TERM 4301 3930951 - 3930935 - T 73 -10.1 -3.04144 | opp_overlap 3930917, overlap 3930917 CGCCTATCGTGAACA GGCCCCA AAA TAGGGCC GTTTACCTTGTGCGG YPO3522 3931366 - 3931010 - | hypothetical protein YPO3523 3935286 - 3931369 - | hypothetical protein YPO3524 3937019 - 3935283 - | hypothetical protein TERM 4302 3937809 - 3937783 - g 82 -7.3 -4.68424 | CAAGCCATGGAAAAA GCCGGTGATCA ACGGG TGATTACCAGC GAAATTACGGTTGCC msrA 3937294 - 3937932 + | methionine sulfoxide reductase A TERM 4303 3938457 - 3938478 + G 71 -5.2 -4.43844 | CCGCTTTCTCCCCTT CGTTCAAA CTCGTT TTTGAGCG TTTTATGGCTCCTGA TERM 4304 3938861 - 3938876 + G 74 -7.6 -4.12738 | CCTTCCTCCATGACT TCACGT GAAA ACGTGA TTTACTTTGATCTAC YPO3526 3938210 - 3939541 + | hypothetical protein TERM 4305 3939578 - 3939603 + T 77 -10.4 -3.14468 | opp_overlap 3939581, overlap 3939581 TGATCACGGTAAACA TAACGGCCCC TGAGTT GGGGCCGTGA TTAAATCTGCTCAGG TERM 4306 3939581 - 3939600 + T 83 -12.1 -2.77658 | opp_overlap 3939581, overlap 3939578 TCACGGTAAACATAA CGGCCCC TGAGTT GGGGCCG TGATTAAATCTGCTC TERM 4307 3939600 - 3939581 - T 100 -12.1 -3.82946 | opp_overlap 3939581 3939578 TCACGGTAAACATAA CGGCCCC TGAGTT GGGGCCG TGATTAAATCTGCTC YPO3527 3939861 - 3939649 - | hypothetical protein TERM 4308 3940743 - 3940715 - g 84 -15.3 -2.84812 | opp_overlap 3940713 3940713, overlap 3940737 ACTGACATCAGCAGA GGTGCAGCAGGTC ATC GACCAACTGCACC AACTTGTGCAGCAAT YPO3528 3940197 - 3940760 + | hypothetical protein cysQ 3941506 - 3940763 - | PAPS (adenosine 3'-phosphate 5'-phosphosulfate) 3'(2'),5'-bisphosphate nucleotidase cpdB 3941938 - 3943908 + | bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein TERM 4309 3944035 - 3943979 - f 100 -13.6 -3.47573 | opp_overlap 3943979 3943986 3944029, overlap 3943980 GGAGTTATATCACAA TCTATAACATGCATTTATTATGCA TGTTATAGG TGTATAATAAATACATGTTATAGA TATATAATTACTCAA TERM 4310 3943979 - 3944035 + F 100 -15.7 -3.02096 | opp_overlap 3943979 3943980, overlap 3943986 3944029 GGAGTTATATCACAA TCTATAACATGCATTTATTATGCATGT TAT AGGTGTATAATAAATACATGTTATAGA TATATAATTACTCAA TERM 4311 3944010 - 3943980 - f 95 -14.3 -2.68223 | opp_overlap 3943979 3943986, overlap 3943979 GAGTTATATCACAAT CTATAACATGCAT TTATT ATGCATGTTATAG GTGTATAATAAATAC YPO3531 3944063 - 3944728 + | cell morphogenesis/cell wall metabolism regulator TERM 4312 3944808 - 3944776 - T 100 -22.9 -4.44046 | opp_overlap 3944783, overlap 3944777 CTTATCGTAAATAAA CGCCAAAGGGCGACA CCC TGTCGCCCTTTGGCA TAATCGGTACCAAGG TERM 4313 3944807 - 3944777 - T 100 -24.2 -3.25946 | opp_overlap 3944783, overlap 3944776 TTATCGTAAATAAAC GCCAAAGGGCGACA CCC TGTCGCCCTTTGGC ATAATCGGTACCAAG TERM 4314 3944783 - 3944801 + T 100 -14.6 -3.62275 | opp_overlap 3944777 3944776 TAAATAAACGCCAAA GGGCGACA CCC TGTCGCCC TTTGGCATAATCGGT fklB 3945446 - 3944826 - | peptidyl-prolyl cis-trans isomerase YPO3533 3945789 - 3946529 + | hypothetical protein YPO3534 3946669 - 3947124 + | hypothetical protein TERM 4315 3947172 - 3947140 - T 100 -11.3 -4.50058 | opp_overlap 3947147, overlap 3947144 3947146 3947147 TACCGATAACCAAAA TAAATATCCTCCGGC ATA GCCGGAGGTTTTTCA TATGCGCCTATAAGG TERM 4316 3947168 - 3947144 - T 100 -9.9 -4.80487 | opp_overlap 3947147, overlap 3947140 3947146 3947147 GATAACCAAAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCATATGCGCCTAT TERM 4317 3947166 - 3947146 - T 100 -12.5 -3.99559 | opp_overlap 3947147, overlap 3947144 3947140 3947147 TAACCAAAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 4318 3947147 - 3947165 + T 100 -16 -4.8048 | opp_overlap 3947146 3947144 3947140 3947147 AACCAAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 4319 3947165 - 3947147 - T 100 -16 -2.98108 | opp_overlap 3947147, overlap 3947146 3947144 3947140 AACCAAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC tnp 3947704 - 3947246 - | transposase for the IS1541 insertion element TERM 4320 3947817 - 3947835 + r 100 -16 -4.36914 | opp_overlap 3947817 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAG TERM 4321 3947835 - 3947817 - R 100 -16 -3.07307 | opp_overlap 3947817 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAG TERM 4322 3947879 - 3947851 - R 95 -14 -2.57132 | opp_overlap 3947856, overlap 3947856 TTTTCTGGGCACAAG CAAAACGCCAGC ACTAG GCTGGCGTTTTA ACAGGTTACAGCCGC TERM 4323 3947874 - 3947856 - R 100 -11.7 -4.48987 | opp_overlap 3947856, overlap 3947851 TGGGCACAAGCAAAA CGCCAGC ACTAG GCTGGCG TTTTAACAGGTTACA TERM 4324 3947856 - 3947874 + r 100 -11.7 -4.11484 | opp_overlap 3947856 3947851 TGGGCACAAGCAAAA CGCCAGC ACTAG GCTGGCG TTTTAACAGGTTACA rplI 3948352 - 3947900 - | 50S ribosomal protein L9 rpsR 3948619 - 3948392 - | 30S ribosomal protein S18 priB 3948944 - 3948624 - | primosomal replication protein n rpsF 3949342 - 3948950 - | 30S ribosomal protein S6 TERM 4325 3948997 - 3949022 + g 70 -9.1 -3.50832 | gap 1, overlap 3948993 3948996 CATTGGCTTCTGACG CGAA-GTCGTGA CGC TCACGGCGTTCG TCTTTCGCTTTAACC YPO3540 3949634 - 3949356 - | hypothetical protein TERM 4326 3950445 - 3950463 + H 100 -13.2 -4.01078 | CCAGGGGGTAATCTG CTCTCCTG ATT CAGGAGAG TTTATGGTCACTTTT y1093 3950467 - 3951489 + | transposase for insertion sequence IS100 TERM 4327 3951570 - 3951556 - g 77 -11.4 -3.3506 | overlap 3951547 TGGAAAGCCTTATAA GCGCAG CGC CTGCGC TGTCACAACAGGCAG YPO3543 3951486 - 3952268 + | transposase/IS protein TERM 4328 3953289 - 3953264 - T 75 -8.9 -3.6284 | AATTAGCACGCTAAA CGCCCTTTTCC CCAA GGCCAAGGGCG TAGCAAGCGAACGTT YPO3545 3954242 - 3953349 - | lysR-family transcriptional regulatory protein YPO3546 3954504 - 3955208 + | hypothetical protein TERM 4329 3955288 - 3955263 - T 100 -11.9 -4.09685 | opp_overlap 3955268 3955269, overlap 3955269 CCCTATCGTGTAAAA CAAAAACCCGC CAAA GCGGGATTTTG TGGCATGAGTGGCGT TERM 4330 3955268 - 3955283 + T 70 -6 -4.40358 | opp_overlap 3955263 3955269, overlap 3955269 TCGTGTAAAACAAAA ACCCGC CAAA GCGGGA TTTTGTGGCATGAGT TERM 4331 3955269 - 3955282 + T 72 -9.5 -3.23733 | opp_overlap 3955263 3955269, overlap 3955268 CGTGTAAAACAAAAA CCCGC CAAA GCGGG ATTTTGTGGCATGAG TERM 4332 3955282 - 3955269 - T 100 -9.5 -5.45802 | opp_overlap 3955269 3955268, overlap 3955263 CGTGTAAAACAAAAA CCCGC CAAA GCGGG ATTTTGTGGCATGAG TERM 4333 3955401 - 3955376 - T 83 -11.9 -2.73124 | opp_overlap 3955381 3955382, overlap 3955382 CCCTATCCTGCAAAG CAAAAACCCGC CGAA GCGGGATTTTG TGGCATGAGTGGCGT TERM 4334 3955381 - 3955396 + T 70 -6 -4.40358 | opp_overlap 3955376 3955382, overlap 3955382 TCCTGCAAAGCAAAA ACCCGC CGAA GCGGGA TTTTGTGGCATGAGT TERM 4335 3955395 - 3955382 - T 100 -9.5 -4.98531 | opp_overlap 3955381 3955382, overlap 3955376 CCTGCAAAGCAAAAA CCCGC CGAA GCGGG ATTTTGTGGCATGAG TERM 4336 3955382 - 3955395 + T 72 -9.5 -3.23733 | opp_overlap 3955382 3955376, overlap 3955381 CCTGCAAAGCAAAAA CCCGC CGAA GCGGG ATTTTGTGGCATGAG TERM 4337 3955514 - 3955489 - T 83 -11.9 -2.73124 | opp_overlap 3955494 3955495, overlap 3955495 CCCTATCCTGCAAAG CAAAAACCCGC CGAA GCGGGATTTTG TGGAATGAGTGGCGT TERM 4338 3955494 - 3955509 + T 70 -6 -4.40358 | opp_overlap 3955489 3955495, overlap 3955495 TCCTGCAAAGCAAAA ACCCGC CGAA GCGGGA TTTTGTGGAATGAGT TERM 4339 3955508 - 3955495 - T 100 -9.5 -4.98531 | opp_overlap 3955494 3955495, overlap 3955489 CCTGCAAAGCAAAAA CCCGC CGAA GCGGG ATTTTGTGGAATGAG TERM 4340 3955495 - 3955508 + T 72 -9.5 -3.23733 | opp_overlap 3955495 3955489, overlap 3955494 CCTGCAAAGCAAAAA CCCGC CGAA GCGGG ATTTTGTGGAATGAG TERM 4341 3955627 - 3955602 - T 83 -11.9 -2.73124 | opp_overlap 3955607 3955608, overlap 3955608 CCCTATCCTCCAAAG CAAAAACCCGC CGAA GCGGGATTTTG TGGAATGAGTGGCGT TERM 4342 3955607 - 3955622 + T 70 -6 -4.40358 | opp_overlap 3955602 3955608, overlap 3955608 TCCTCCAAAGCAAAA ACCCGC CGAA GCGGGA TTTTGTGGAATGAGT TERM 4343 3955621 - 3955608 - T 100 -9.5 -4.98531 | opp_overlap 3955607 3955608, overlap 3955602 CCTCCAAAGCAAAAA CCCGC CGAA GCGGG ATTTTGTGGAATGAG TERM 4344 3955608 - 3955621 + T 72 -9.5 -3.23733 | opp_overlap 3955608 3955602, overlap 3955607 CCTCCAAAGCAAAAA CCCGC CGAA GCGGG ATTTTGTGGAATGAG TERM 4345 3955740 - 3955715 - T 83 -11.9 -2.73124 | opp_overlap 3955720 3955721, overlap 3955721 CCCTATCCTCCAAAG CAAAAACCCGC CGAA GCGGGATTTTG TGGAATGAGTGGAGT TERM 4346 3955720 - 3955735 + T 70 -6 -4.40358 | opp_overlap 3955715 3955721, overlap 3955721 TCCTCCAAAGCAAAA ACCCGC CGAA GCGGGA TTTTGTGGAATGAGT TERM 4347 3955734 - 3955721 - T 100 -9.5 -4.98531 | opp_overlap 3955720 3955721, overlap 3955715 CCTCCAAAGCAAAAA CCCGC CGAA GCGGG ATTTTGTGGAATGAG TERM 4348 3955721 - 3955734 + T 72 -9.5 -3.23733 | opp_overlap 3955721 3955715, overlap 3955720 CCTCCAAAGCAAAAA CCCGC CGAA GCGGG ATTTTGTGGAATGAG YPO3547 3957044 - 3956145 - | putative tetrapyrrole methylase TERM 4349 3956240 - 3956257 + g 77 -10.5 -3.60762 | overlap 3956242 TGACTCCATGAATTT CTGCCGC TAAT GCGGCGG CTTTTTTCAGCGGTA TERM 4350 3956242 - 3956258 + g 87 -7.2 -5.02074 | overlap 3956240 ACTCCATGAATTTCT GCCGCT AATGC GGCGGC TTTTTTCAGCGGTAA TERM 4351 3957109 - 3957091 - H 80 -2.5 -5.42259 | gap 1, opp_overlap 3957091, overlap 3957094 GCATCTTGAAAAAAA CATCACTG GATA CAGT-ATG CTTTCCTCAACGTTC TERM 4352 3957460 - 3957450 - g 74 -8.2 -4.03995 | opp_overlap 3957452 3957453, overlap 3957451 TCGCGCAGAAAAATA CGCC AGC GGCG GCTGATATTCTTGCC YPO3548 3957107 - 3959080 + | hypothetical protein TERM 4353 3959244 - 3959278 + G 78 -10 -3.82824 | TCTCGTTTTTCAAGC GGCCAATGTTGCCTTC CGT GGAGGCGAAATTGACC TTATTATGCGTGATG TERM 4354 3959392 - 3959429 + G 71 -7.9 -4.07885 | gap 3, opp_overlap 3959383 3959380 3959384, overlap 3959380 CAACAACGGCTACAT CTGGCCGCCGCTGTT-TG GCTGG CACAAC-GCGGC-GCCAG TTTTGCCACAACATC YPO3549 3959164 - 3959517 + | hypothetical protein TERM 4355 3959606 - 3959592 - f 77 -5 -5.00642 | opp_overlap 3959592 CAAGCGAGAGAAAAA TTGGTC TGG AACCAA TTTGAACAGCATTTA YPO3550 3959788 - 3960378 + | DnaA initiator-associating protein DiaA TERM 4356 3960531 - 3960489 - g 85 -7.6 -4.82901 | CGGTTGCCACAAAAA CCGCCACGGATCCACGTACC ATC GGTACGCAGGTAGATGACGG CACACTGGAAGCCAG YPO3551 3960389 - 3960964 + | hypothetical protein TERM 4357 3961037 - 3960992 - T 71 -6.8 -4.11363 | opp_overlap 3961001, overlap 3960985 AAGAAGATTAAATAA GATTTATCACGGGCTTAGCG CTAAAC CGCCAAGCCCGTTTTTTATC CACCACATCGATACC TERM 4358 3961001 - 3961028 + T 100 -12.7 -5.24129 | opp_overlap 3960992 AAATAAGATTTATCA CGGGCTTAGCG CTAAAC CGCCAAGCCCG TTTTTTATCCACCAC mtgA 3961896 - 3961171 - | monofunctional biosynthetic peptidoglycan transglycosylase elbB 3962546 - 3961893 - | isoprenoid biosynthesis protein with amidotransferase-like domain YPO3554 3962770 - 3962576 - | hypothetical protein TERM 4359 3962767 - 3962790 + g 100 -4.4 -5.81032 | overlap 3962770 TGGCGCAGTCTTCGC GCACCCCGGC CTCG GTCGGGGTTA TTTTTTTTCAACTTC TERM 4360 3962770 - 3962787 + r 100 -10.5 -4.96028 | overlap 3962767 CGCAGTCTTCGCGCA CCCCGGC CTCG GTCGGGG TTATTTTTTTTCAAC arcB 3965124 - 3962788 - | aerobic respiration control sensor protein ArcB YPO3556 3966311 - 3965388 - | hypothetical protein TERM 4361 3965695 - 3965705 + g 79 -6.8 -4.60924 | opp_overlap 3965690 ATCCCATCAACACCG GTGG TGA CCAC TTTTTCCAAGGTTTC TERM 4362 3967880 - 3967858 - g 70 -9.8 -3.33419 | overlap 3967844 3967856 3967852 ACGGCGAAATCAACA CCATCGCCGG TAA CCGCCAATGG GCCAAGGCGCGTGCC gltB 3967134 - 3971600 + | glutamate synthase subunit alpha TERM 4363 3971762 - 3971727 - g 78 -9.6 -3.89695 | opp_overlap 3971738 3971740 TTCTCAGAAACACAA GCCAAAGCACAGGCCG ATCG CTGCCTGTCCTGCGGC AATCCGTACTGTGAA TERM 4364 3972068 - 3972089 + G 84 -15.1 -2.8632 | overlap 3972061 3972059 TGTGGCCGTGATCGG GGCCGGCCC TGCC GGGCTGGCC TGTGCTGATGTATTA gltD 3971610 - 3973028 + | glutamate synthase subunit beta TERM 4365 3973095 - 3973058 - f 71 -6.9 -4.23647 | opp_overlap 3973057 3973063, overlap 3973059 AAATCATTCAATAAA CGCTAGGGCGGGTTC AATTCACA GAACCCGCCCTTTCT ATTTATTCTATTTAT TERM 4366 3973094 - 3973059 - f 77 -10.4 -3.13104 | opp_overlap 3973057 3973063, overlap 3973058 AATCATTCAATAAAC GCTAGGGCGGGTTC AATTCACA GAACCCGCCCTTTC TATTTATTCTATTTA TERM 4367 3973063 - 3973090 + F 100 -14.2 -4.48483 | opp_overlap 3973059 3973058, overlap 3973057 ATTCAATAAACGCTA GGGCGGGTTC AATTCACA GAACCCGCCC TTTCTATTTATTCTA YPO3559 3973469 - 3973954 + | hypothetical protein TERM 4368 3974073 - 3974045 - T 70 -5.2 -4.51238 | gap 1, overlap 3974051 CGCACAAAACAGAAA CGATAAGGGCGGC TAAC GCCGCCCTGAA-G AGATAGAGCCTGTAT TERM 4369 3974068 - 3974051 - T 100 -14.1 -3.69613 | overlap 3974045 AAACAGAAACGATAA GGGCGGC TAAC GCCGCCC TGAAGAGATAGAGCC TERM 4370 3974126 - 3974161 + T 76 -9.6 -3.41602 | gap 1, opp_overlap 3974115 TTAACCACGCGTAAT GCCG-GGCGGCCACCAC TCC GTGGCGGTTGCGGCGGC TTATCATCCGGTGAA sspB 3974622 - 3974107 - | ClpXP protease specificity-enhancing factor sspA 3975269 - 3974628 - | stringent starvation protein A TERM 4371 3975606 - 3975590 - R 100 -13.7 -5.64274 | opp_overlap 3975590 TCAGGCATAAAAAAA CCCGGTG AGA CACCGGG TTTTTACCATCAATC TERM 4372 3975590 - 3975606 + r 100 -13.7 -4.62783 | opp_overlap 3975590 TCAGGCATAAAAAAA CCCGGTG AGA CACCGGG TTTTTACCATCAATC rpsI 3976035 - 3975643 - | 30S ribosomal protein S9 rplM 3976478 - 3976050 - | 50S ribosomal protein L13 TERM 4373 3976278 - 3976295 + g 79 -5.5 -4.91712 | CTTGTCTGTACGCTT GTTGCCG GTTA CAGCAAC TTTTTCTGCGTTCAG TERM 4374 3976602 - 3976626 + r 71 -8.8 -3.33162 | opp_overlap 3976606, overlap 3976606 CAATGCTGGCACTAT CAAAGTTTTT GGGAA AAAAACTTTG TTGTAACGTGGGGTC TERM 4375 3976737 - 3976718 - R 81 -11.4 -2.76249 | TAAACATGTTAAGTA CGGACGAC AAAT GTCGCCCG CCATAGAATAGCATT YPO3564 3977919 - 3976792 - | hypothetical protein TERM 4376 3978118 - 3978107 - H 71 -4.4 -4.7629 | TTATTAAGTGAAAAA GTTC TGCT GAAC AATGAAGTCAAAAAA YPO3565 3978143 - 3978547 + | cytochrome d ubiquinol oxidase subunit III TERM 4377 3979538 - 3979510 - g 72 -9.7 -3.35992 | gap 1, opp_overlap 3979512 ACTGATCGGAATTAA TACCGCCATCCT TGCGCC AGG-TGGCGGTA ATATCGGTATCGGCT degQ 3978818 - 3980191 + | protease TERM 4378 3980234 - 3980202 - T 95 -11.3 -3.89614 | opp_overlap 3980209, overlap 3980206 3980208 3980209 GCTAATTTGCAGAAA TAAATATCCTCCGGC ATA GCCGGAGGTTTTTCA TATGCGCCTATAAGG TERM 4379 3980230 - 3980206 - T 100 -9.9 -4.55697 | opp_overlap 3980209, overlap 3980202 3980208 3980209 ATTTGCAGAAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCATATGCGCCTAT TERM 4380 3980228 - 3980208 - T 100 -12.5 -3.88703 | opp_overlap 3980209, overlap 3980206 3980202 3980209 TTGCAGAAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 4381 3980227 - 3980209 - T 100 -16 -2.92499 | opp_overlap 3980209, overlap 3980208 3980206 3980202 TGCAGAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 4382 3980209 - 3980227 + T 100 -16 -4.8048 | opp_overlap 3980209 3980208 3980206 3980202 TGCAGAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC tnp 3980766 - 3980308 - | transposase for the IS1541 insertion element TERM 4383 3980879 - 3980897 + H 100 -16 -4.36914 | opp_overlap 3980879 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 4384 3980897 - 3980879 - H 100 -16 -3.07307 | opp_overlap 3980879 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 4385 3980941 - 3980915 - H 100 -15.2 -4.82901 | overlap 3980916 TTCTGGGCACAAAAA TCGGACACAGCA CGA TGCTGTGTCCGC CTAACTCATGCTATT TERM 4386 3980940 - 3980916 - H 100 -18.7 -3.49419 | overlap 3980915 TCTGGGCACAAAAAT CGGACACAGCA CGA TGCTGTGTCCG CCTAACTCATGCTAT degS 3980992 - 3982080 + | serine endoprotease TERM 4387 3982177 - 3982201 + T 100 -8.6 -5.27335 | opp_overlap 3982177 TATAAACATAAAAAA TGCCAGCC CCAATCACC GGCTGGCA TTTTTATTTACCGAA TERM 4388 3982201 - 3982177 - T 100 -8.6 -5.59879 | opp_overlap 3982177 TATAAACATAAAAAA TGCCAGCC CCAATCACC GGCTGGCA TTTTTATTTACCGAA murA 3983523 - 3982261 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase YPO3570 3983940 - 3983677 - | BolA-like protein TERM 4389 3984039 - 3984011 - R 84 -6.1 -5.04868 | gap 1, opp_overlap 3984011 TGAAACTAAAGAAAA GCCCCTGTG-AT GCCATT ATGCACAGGAGC TTGATTATCTTACCT YPO3571 3984380 - 3984078 - | putative anti-sigma B factor antagonist TERM 4390 3984286 - 3984310 + g 82 -12.2 -3.5764 | opp_overlap 3984299 GCCAGCAAGGTTTCA CGCTGTTGCC AAAGC GGTAACAGCG TTTCACGATCCAGTT yrbC 3985039 - 3984416 - | hypothetical protein yrbD 3985609 - 3985052 - | hypothetical protein yrbE 3986396 - 3985614 - | hypothetical protein yrbF 3987432 - 3986614 - | putative ABC transporter ATP-binding protein YrbF TERM 4391 3988099 - 3988109 + G 70 -2.4 -4.9645 | overlap 3988097 GTCATCTTGCTCTTG GCTG CTG CCGC TTTTATTGTTCTGAT yrbG 3987697 - 3988671 + | putative calcium/sodium:proton antiporter YPO3577 3988782 - 3989768 + | D-arabinose 5-phosphate isomerase YPO3578 3990017 - 3990580 + | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase yrbK 3990577 - 3991140 + | hypothetical protein YPO3580 3991124 - 3991669 + | hypothetical protein yhbG 3991676 - 3992401 + | putative ABC transporter ATP-binding protein YhbG TERM 4392 3993638 - 3993648 + G 79 -6.8 -4.62336 | opp_overlap 3993604 3993597 GAAATTCTTGCACAG TCCC CGA GGGA TTTTTGAACTGAAGT rpoN 3992463 - 3993896 + | RNA polymerase factor sigma-54 TERM 4393 3994076 - 3994065 - f 71 -4.4 -4.88646 | AAAAAGTAAAACAAA TTGC AGAA GCAA CGGTACATGTGAATG TERM 4394 3994297 - 3994258 - f 100 -21.6 -2.88249 | opp_overlap 3994266 3994296, overlap 3994266 TACACTCGCTACATA GCCAGATACCGGTGGATA TTTA TTCCCACCGGTATCTGGC GTAAACAGCGCTTAA ptsN 3994325 - 3994807 + | sugar-specific enzyme IIA component of PTS TERM 4395 3995034 - 3995016 - f 74 -10.3 -2.60496 | overlap 3995015 3995013 TGCGGCTCGAAAGAG GGTGGGT TCCGC ACCCACC ACACCCCGGTTTGTA YPO3586 3995113 - 3995967 + | hypothetical protein ptsO 3995964 - 3996236 + | phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr) TERM 4396 3996461 - 3996477 + F 100 -13.7 -6.06529 | AACCGATCCTGTAAG GCCCCTC GTT GAGGGGC TTTTTTTTGTCTGTC pyrB 3996574 - 3997509 + | aspartate carbamoyltransferase catalytic subunit pyrI 3997521 - 3997985 + | aspartate carbamoyltransferase regulatory subunit YPO3590 3998123 - 3998509 + | hypothetical protein TERM 4397 3998521 - 3998560 + F 100 -15 -5.05113 | TTAATCCCTCCCCCA TCACCGCATACGGCGGGT TATC GCCAGCCGCATGTGGTGA TTTTATTTCTCTCCG TERM 4398 3998828 - 3998846 + F 100 -13.2 -4.01078 | CCAGGGGGTAATCTG CTCTCCTG ATT CAGGAGAG TTTATGGTCACTTTT y1093 3998850 - 3999872 + | transposase for insertion sequence IS100 TERM 4399 3999953 - 3999939 - g 77 -11.4 -3.3506 | overlap 3999930 TGGAAAGCCTTATAA GCGCAG CGC CTGCGC TGTCACAACAGGCAG YPO3592 3999869 - 4000651 + | transposase/IS protein YPO3592A 4000924 - 4000721 - | insertion element IS1661 protein (gene fragment) TERM 4400 4000975 - 4000929 - H 100 -15.4 -3.05384 | gap 1, opp_overlap 4000935, overlap 4000934 4000955 GGGTGTTTCATTGAA CCGAACCTCCAGATCATGGAT AAAAAG ATCCAAGATCTGG-GGTTCAG TGCACCGGGGTCATG TERM 4401 4000970 - 4000934 - H 77 -10.3 -3.19192 | gap 1, opp_overlap 4000935, overlap 4000929 4000955 TTTCATTGAACCGAA CCTCCAGATCATGGAT AAAAAG ATCCAAGATCTGG-GG TTCAGTGCACCGGGG TERM 4402 4000935 - 4000970 + H 93 -12.7 -3.05384 | opp_overlap 4000934 4000929 4000955 TTCATTGAACCGAAC CTCCAGATCATGGAT AAAAAG ATCCAAGATCTGGGG TTCAGTGCACCGGGG TERM 4403 4000965 - 4000955 - H 75 -5.4 -4.88736 | opp_overlap 4000935, overlap 4000934 4000929 GATCATGGATAAAAA GATC CAA GATC TGGGGTTCAGTGCAC YPO3594 4001721 - 4002770 + | hypothetical protein TERM 4404 4002919 - 4002908 - g 78 -2.2 -5.28778 | overlap 4002912 ACCATGGATAAAAAA CAAC CAAC GCTG TCATTGCGGGTCGTC YPO3595 4002896 - 4004212 + | hypothetical protein YPO3596 4004212 - 4004757 + | putative lipoprotein YPO3597 4004760 - 4006106 + | hypothetical protein YPO3598 4006106 - 4006873 + | hypothetical protein TERM 4405 4007644 - 4007634 - g 70 -3.2 -4.83615 | CAGGTGCCAGAAAAA CTGC GTA ACAG CGAGTTGATGACGCT TERM 4406 4009430 - 4009404 - g 74 -8.6 -4.08706 | overlap 4009400 TTGTTATTACAGAAA GTGGCCGCTGGC ACC GCTATCAGCCAC ATTCGGATCGCGGTA clpB2 4006884 - 4009487 + | Clp ATPase TERM 4407 4010217 - 4010205 - g 73 -6.2 -4.54821 | ACGGTAACGACAAAA GCCG TATTG CGGC CAGTTTGGGGCTATC YPO3600 4009484 - 4010281 + | hypothetical protein YPO3601 4010278 - 4010964 + | hypothetical protein YPO3602 4010961 - 4012358 + | hypothetical protein TERM 4408 4012445 - 4012467 + G 81 -12.8 -3.23711 | opp_overlap 4012445 4012444, overlap 4012436 TTCCTCGCCTTAAAG CGTCAATACC GGT GGTATTGGCG TTGATGGCTTGTGCG TERM 4409 4013757 - 4013732 - g 86 -6.9 -5.00616 | TCTGGCTGCAAAAAA CGAGAAAGCGA ATGT TCATTTTCTCG GGGGTGGGTGCCCTG TERM 4410 4015074 - 4015056 - g 79 -8.8 -4.18018 | overlap 4015057 GTTGGCGATCCAAAA CTCGCCCG CGC CGGGCAAA GCGGCGTTGAAGGCG YPO3603 4012390 - 4015923 + | hypothetical protein TERM 4411 4016169 - 4016142 - g 70 -3.4 -4.77983 | gap 1, overlap 4016146 4016149 AAGAGATCAACAAAA TCAACCACCCGGC ACG GCCAGA-GGTCAA CTGGGGTTTGATTGA TERM 4412 4016279 - 4016269 - g 80 -2.4 -5.47218 | opp_overlap 4016269 CCGCACCCAAAAAAA TGGC CTG GCCG GTTTCACCGAGGGCT YPO3604 4016048 - 4016830 + | hypothetical protein TERM 4413 4017274 - 4017262 - g 75 -10.5 -3.39449 | opp_overlap 4017260 4017262 GCCGATGAACATCAA CCGGC CTC GCCGG TCTTGATAAAACAAA TERM 4414 4017262 - 4017274 + G 71 -10.5 -3.13403 | opp_overlap 4017262, overlap 4017260 GCCGATGAACATCAA CCGGC CTC GCCGG TCTTGATAAAACAAA YPO3605 4016827 - 4017360 + | hypothetical protein YPO3606 4017382 - 4019784 + | putative Rhs accessory genetic element YPO3607 4019790 - 4020248 + | hypothetical protein TERM 4415 4020384 - 4020399 + G 74 -6.8 -4.34488 | overlap 4020375 CACCGGCGGGGCGAC GCTGGT CGCT ACCGGC TTTATTGTGGGTATG TERM 4416 4022249 - 4022222 - g 70 -10.6 -2.93348 | GCTACGAATATGATA TCGATGGCCATC TGCT GACGGTCATCGA TGCTGAAAACCATTC YPO3608 4020241 - 4023105 + | hypothetical protein YPO3609 4023133 - 4024503 + | hypothetical protein YPO3610 4024505 - 4024990 + | hypothetical protein TERM 4417 4025008 - 4025030 + T 72 -9.2 -3.19175 | CATGTAAGCGTATGG GGAGGATC ATTGTTG GATCCTCC TTGAATATATTACAA YPO3611 4025231 - 4025040 - | hypothetical protein TERM 4418 4025562 - 4025593 + r 93 -12.3 -3.0752 | overlap 4025564 GTTGCTTGTGGTTAG CGGGGCTGAGGTG CTGATA CACCTCAACCCTG TGTTAAAATACTGTG TERM 4419 4025564 - 4025591 + r 84 -11.3 -3.09289 | overlap 4025562 TGCTTGTGGTTAGCG GGGCTGAGGTG CTGATA CACCTCAACCC TGTGTTAAAATACTG YPO3612 4026020 - 4025613 - | putative transcriptional regulatory protein TERM 4420 4025887 - 4025919 + g 70 -2.6 -4.95843 | opp_overlap 4025891 TATTTATTGTACTGT GAAAGTTGCAAGCC AATAC GGGTCGCGACTTCC TTTTGTGTTTTATGT TERM 4421 4026273 - 4026261 - H 78 -10.5 -3.39449 | opp_overlap 4026261 4026259 GCCGATGAACATCAA CCGGC CTC GCCGG TCTTGATAAAACAAA TERM 4422 4026261 - 4026273 + H 77 -10.5 -3.13403 | opp_overlap 4026261, overlap 4026259 GCCGATGAACATCAA CCGGC CTC GCCGG TCTTGATAAAACAAA TERM 4423 4028347 - 4028368 + G 73 -5.1 -4.65916 | gap 1, opp_overlap 4028347, overlap 4028349 CCGAGACGATCAAAG TGCGTCGCAG TAC CTGCG-CGAA TTTTATTCAGGTGAA YPO3613 4026381 - 4028579 + | putative Rhs accessory genetic element YPO3614 4028582 - 4029004 + | hypothetical protein TERM 4424 4029144 - 4029116 - g 77 -10.2 -3.62096 | opp_overlap 4029111, overlap 4029134 CGGCATTACGTCAAA CCGCGCTGGG GCAACAGAG CCCGGCGCGG ACGGATTATCAGGTC TERM 4425 4032520 - 4032508 - g 70 -4.7 -4.69027 | overlap 4032497 4032510 AAACGCAGCCAAAAA GACGG CTA CCGGC CACAGCTGTGGCGCT YPO3615 4029049 - 4033587 + | hypothetical protein YPO3616 4033596 - 4034390 + | hypothetical protein TERM 4426 4034395 - 4034429 + T 100 -14.4 -5.14563 | opp_overlap 4034398, overlap 4034398 AACTGCCATAAATAA AAACCGGGAAGATCCT AAG AAGATCTTCCCGGTTG TTTTTTGATCGCCAG TERM 4427 4034426 - 4034398 - T 100 -18.3 -5.38054 | opp_overlap 4034395 4034398 TGCCATAAATAAAAA CCGGGAAGATCCT AAG AAGATCTTCCCGG TTGTTTTTTGATCGC TERM 4428 4034398 - 4034426 + T 100 -16.1 -4.67552 | opp_overlap 4034398, overlap 4034395 TGCCATAAATAAAAA CCGGGAAGATCCT AAG AAGATCTTCCCGG TTGTTTTTTGATCGC TERM 4429 4034677 - 4034699 + T 100 -4 -6.14618 | opp_overlap 4034678, overlap 4034678 TTTTTAGTGATACAA AGTGACTGGT TTA GCCAGCCACA TTTTTTTGTTTTATA TERM 4430 4034698 - 4034678 - T 80 -9 -4.0641 | opp_overlap 4034677 4034678 TTTTAGTGATACAAA GTGACTGG TTTAG CCAGCCAC ATTTTTTTGTTTTAT TERM 4431 4034678 - 4034698 + T 75 -7.5 -4.25111 | opp_overlap 4034678, overlap 4034677 TTTTAGTGATACAAA GTGACTGGT TTA GCCAGCCAC ATTTTTTTGTTTTAT YPO3617 4035636 - 4034737 - | hypothetical protein YPO3618 4036763 - 4035633 - | putative oxidoreductase YPO3619 4036958 - 4037899 + | putative araC-family transcriptional regulatory protein YPO3620 4038564 - 4038061 - | putative carbohydrate transport protein YPO3621 4039502 - 4038570 - | probable carbohydrate kinase TERM 4432 4039328 - 4039308 - G 82 -11.9 -3.58536 | AAATTCATGGCCAAA GGTGTCATC ACC GACGACACC CGCATAGGCGACCTC YPO3622 4040357 - 4039656 - | putative deoxyribose-phosphate aldolase ssuE 4040828 - 4041409 + | NAD(P)H-dependent FMN reductase ssuA 4041424 - 4042545 + | alkanesulfonate transporter substrate-binding subunit ssuD 4042564 - 4043712 + | alkanesulfonate monooxygenase ssuC 4043721 - 4044518 + | putative aliphatic sulfonates transport permease protein TERM 4433 4044948 - 4044972 + G 95 -11.3 -4.57882 | AACGTGTTGCACTGG CGCGGGCGCTG ATC CATCGCCCCCG TTTATTGTTGTTGGA ssuB 4044515 - 4045330 + | aliphatic sulfonates transport ATP-binding subunit TERM 4434 4045783 - 4045809 + T 72 -10.1 -2.84602 | gap 1, opp_overlap 4045772, overlap 4045778 4045784 ACATCCATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCCCTGCC TERM 4435 4045784 - 4045810 + T 84 -10.1 -3.74872 | gap 1, opp_overlap 4045772, overlap 4045778 4045783 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCCCTGCCT TERM 4436 4045893 - 4045910 + T 70 -2.7 -5.00884 | CGCCTTTTTATTCTT GGTGTAA CGCT TTGCATC TTTTTTAAAGCGGCT YPO3628 4046152 - 4045949 - | putative DNA-damage-inducible protein TERM 4437 4046264 - 4046223 - H 88 -11.1 -3.75015 | gap 1, opp_overlap 4046214 4046226 4046227, overlap 4046226 ATAACCTCCATTAAA TTAC-CCTTATTGTAGCTAC GAT GTAGCTACAATAAGGTGTTT GAGCGATGTTTATTC TERM 4438 4046260 - 4046226 - H 100 -17.4 -2.96873 | opp_overlap 4046214 4046226 4046227, overlap 4046223 ACCTCCATTAAATTA CCCTTATTGTAGCTAC GAT GTAGCTACAATAAGGT GTTTGAGCGATGTTT TERM 4439 4046226 - 4046261 + H 100 -17.2 -3.58329 | gap 1, opp_overlap 4046226 4046223, overlap 4046214 4046227 ACCTCCATTAAATTA C-CCTTATTGTAGCTAC GAT GTAGCTACAATAAGGTG TTTGAGCGATGTTTA TERM 4440 4046227 - 4046259 + H 100 -20.9 -3.36341 | opp_overlap 4046226 4046223, overlap 4046226 4046214 CCTCCATTAAATTAC CCTTATTGTAGCTAC GAT GTAGCTACAATAAGG TGTTTGAGCGATGTT TERM 4441 4046778 - 4046791 + G 72 -8.1 -3.86346 | opp_overlap 4046768, overlap 4046777 GCAAAGCCGGTTTCC CACCG ACGG CGGTG TTTGTCGCGACCTGC TERM 4442 4047507 - 4047530 + G 70 -4.6 -4.64657 | gap 1, opp_overlap 4047489, overlap 4047510 GCGGTGGTAAAGCGC TGACCACTGAC TCC GTCAGTAG-CA TTTTTGCGGGTTTGG yjcD 4046606 - 4047961 + | putative xanthine/uracil permease TERM 4443 4048113 - 4048149 + F 76 -9.3 -3.45514 | overlap 4048112 4048104 TAATAACAATTGGTT GCAGGCATCGGGGGGGA TTA TCCTCCCCGATGTGAAC TTAATGTTATATATC yjcE 4048310 - 4049959 + | putative putative Na(+)/H(+) exchanger protein TERM 4444 4049971 - 4049989 + T 100 -12.4 -3.61268 | TTAATATCTTACGGA CGGGGCTA ATT TGGCCCCG TTTACCGATTACATG YPO3631 4051364 - 4050177 - | hypothetical protein TERM 4445 4050742 - 4050774 + g 86 -8.4 -4.74801 | opp_overlap 4050742 4050741 ATGGGTTCACCAAAG GCGGTGACTAACGC ATTTC GCGTTAATGGCCGC TTTTTGCTCAGATTA ddg 4052436 - 4051516 - | lipid A biosynthesis palmitoleoyl acyltransferase YPO3633 4053161 - 4054219 + | putative periplasmic binding protein YPO3634 4054423 - 4055919 + | ABC transporter ATP binding protein TERM 4446 4055936 - 4055953 + G 71 -5.5 -4.55118 | opp_overlap 4055928 CTAAAACTGCGCCAA CTCACGG GGCA CCATGAG TTTTATCTCGGGTTG YPO3635 4055912 - 4056901 + | putative branched-chain amino acid transport system, permease component YPO3636 4056903 - 4057856 + | putative ABC transporter, permease protein YPO3637 4057875 - 4059512 + | putative carbohydrate kinase YPO3638 4059509 - 4060114 + | putative phosphosugar isomerase/binding protein TERM 4447 4060173 - 4060148 - T 86 -9 -4.32857 | gap 1, opp_overlap 4060148 CGCGTGAAAGAGAAA CACCGCAACGG TATGG CCGC-GCGGTG TTTTTTTATGTCAGT TERM 4448 4060148 - 4060173 + T 100 -7.5 -5.72616 | gap 1, opp_overlap 4060148 CGCGTGAAAGAGAAA CACCGCAACGGT ATG GCCGC-GCGGTG TTTTTTTATGTCAGT TERM 4449 4060245 - 4060266 + T 70 -3.6 -4.85599 | TTTTTTCAGCACTCT GAGCCTGC ACTAAG GCCGGTTC TTTTTATCAGGTCAG yghU 4061158 - 4060304 - | putative glutathione S-transferase YghU TERM 4450 4060698 - 4060677 - G 74 -7.9 -4.20883 | opp_overlap 4060692, overlap 4060692 4060693 TAAAAATGCCCAAAA CCGCCCCCT AAAT AAGGGGCTG CACCTTGTAGCCAGA TERM 4451 4060782 - 4060764 - G 71 -6.7 -4.1552 | opp_overlap 4060752 GATTTCGGTAAGAAA TGACCGA ATTTA TCGGCCA AATAAAGCAGAATGG YPO3640 4061409 - 4062755 + | hypothetical protein TERM 4452 4062779 - 4062824 + T 88 -6.8 -5.12707 | opp_overlap 4062779 4062778 ATCTTTCCTGACAAG CCCGGGTATGAACTGTCC AACTTTATGG GGCCAGTCCATGCGCGGG TTTTTTACGCTTTAA YPO3641 4064037 - 4062862 - | hypothetical protein TERM 4453 4062919 - 4062934 + g 81 -6.2 -5.04082 | overlap 4062925 CTCAAGAATGTTAAG TGTCTT GGAT AAGACA TTTTCTTGTTCTTTG TERM 4454 4063936 - 4063920 - G 73 -2.9 -4.93296 | overlap 4063921 4063924 CCATGACGATAAAAA CCAGCAC AGG GTCCTGA GTCTCACTTTTAAGA TERM 4455 4064272 - 4064293 + H 71 -4.4 -4.82901 | opp_overlap 4064275, overlap 4064275 GTCATAGGCACAAAA AAACCTGC ACGGAG GCAGGTTC TTTTTGTGCCCAGAA TERM 4456 4064290 - 4064275 - H 100 -6.1 -5.65177 | opp_overlap 4064272 4064275 ATAGGCACAAAAAAA CCTGC ACGGAG GCAGG TTCTTTTTGTGCCCA TERM 4457 4064275 - 4064290 + H 74 -6.1 -4.52873 | opp_overlap 4064275, overlap 4064272 ATAGGCACAAAAAAA CCTGC ACGGAG GCAGG TTCTTTTTGTGCCCA TERM 4458 4064329 - 4064311 - H 100 -16 -4.36914 | opp_overlap 4064311 TTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC TERM 4459 4064311 - 4064329 + H 100 -16 -3.07307 | opp_overlap 4064311 TTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC tnp 4064442 - 4064900 + | transposase for the IS1541 insertion element TERM 4460 4064978 - 4065002 + T 100 -9.9 -4.47456 | opp_overlap 4064981, overlap 4064980 4064981 ATAGGCGCATATGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTATTCGGTAT TERM 4461 4064980 - 4065000 + T 100 -12.5 -3.83566 | opp_overlap 4064981, overlap 4064978 4064981 AGGCGCATATGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTATTCGGT TERM 4462 4064981 - 4064999 + T 100 -16 -2.89055 | opp_overlap 4064981, overlap 4064980 4064978 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTATTCGG TERM 4463 4064999 - 4064981 - T 100 -16 -4.8048 | opp_overlap 4064981 4064980 4064978 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTATTCGG cspa2 4065295 - 4065083 - | major cold shock protein Cspa2 cspa1 4065767 - 4065555 - | major cold shock protein Cspa1 YPO3645 4066024 - 4065860 - | hypothetical protein TERM 4464 4066265 - 4066229 - R 78 -10.3 -3.33162 | gap 1, overlap 4066230 TACGGCATTTGATAA CCAGTCCGTAGGCATG GGCTAT CA-GCCTACAGACTGA AAACTGGGGTTAACG TERM 4465 4066264 - 4066230 - R 80 -11.6 -2.59683 | gap 1, overlap 4066229 ACGGCATTTGATAAC CAGTCCGTAGGCATG GGCTAT CA-GCCTACAGACTG AAAACTGGGGTTAAC pcp 4066767 - 4066300 - | outer membrane lipoprotein YPO3647 4067228 - 4068055 + | hypothetical protein YPO3648 4068120 - 4069010 + | putative 2-hydroxy-3-oxopropionate reductase YPO3649 4069188 - 4069583 + | putative gamma carboxymuconolactone decarboxylase YPO3650 4069737 - 4071101 + | putative metabolite transport protein YPO3651 4071191 - 4071853 + | putative GntR-family transcriptional regulatory protein YPO3652 4071919 - 4072395 + | hypothetical protein YPO3653 4072626 - 4072745 + | putative colicin immunity protein TERM 4466 4073119 - 4073094 - T 89 -6.8 -5.32882 | opp_overlap 4073094 CATTATTATAAAAAA GGCGCTAACC AATTAA GGATAACGCC TTTTTAAACAACACC fis 4073445 - 4073149 - | DNA-binding protein Fis YPO3655 4074435 - 4073470 - | tRNA-dihydrouridine synthase B TERM 4467 4074983 - 4075008 + r 100 -19.1 -2.52464 | opp_overlap 4074972, overlap 4074972 AAAGGTGAGTTGTGA CGCACACGGAC TCAA GTCCGTGTGCG TCAGTTAAGGCAAAA prmA 4075905 - 4075024 - | ribosomal protein L11 methyltransferase TERM 4468 4075057 - 4075086 + g 71 -7.2 -3.99324 | AATGCGGCACCATTC TTCTTTCTCGGC GACTGG GTCGAGAATGAA TTTATCCTCATAGGC TERM 4469 4075225 - 4075257 + g 77 -9.2 -4.09685 | gap 1, opp_overlap 4075218 CAGAATATTGGCCAC GACCACGTCAGCAGA TAGT TCTGCGGGC-TGGTC TTTTGCCAGATACAG TERM 4470 4075922 - 4075953 + r 100 -15.9 -2.77148 | overlap 4075920 4075917 4075915 GCAATTCTCTCAAGC GCCGGTATCGGGG CCATAA CCACGATACCGGC TGATGTGTTGATAGA panF 4077435 - 4075981 - | sodium/panthothenate symporter TERM 4471 4077316 - 4077302 - G 73 -5.6 -4.66938 | ATCGCCAATACAAAA CCGCCC ATC GAACGG TTGCCGATAAAATAT yhdT 4077667 - 4077425 - | hypothetical protein TERM 4472 4078805 - 4078784 - R 75 -2.3 -5.40004 | overlap 4078785 GAGCAAATTAAAAAA TTTCAGCTT AAAT AAACTGAAG GTAAGATATACGGCT TERM 4473 4078900 - 4078868 - R 86 -12.1 -3.20435 | opp_overlap 4078869, overlap 4078869 TTAATTAGCCATCAA GGCCTGAATTCCGCA CTC TACAGAATTCAGGCT TTTTAACTTCAGTTT TERM 4474 4078899 - 4078869 - R 100 -15.6 -2.5194 | opp_overlap 4078869, overlap 4078868 TAATTAGCCATCAAG GCCTGAATTCCGCA CTC TACAGAATTCAGGC TTTTTAACTTCAGTT TERM 4475 4078869 - 4078899 + r 100 -11.2 -4.75776 | opp_overlap 4078869 4078868 TAATTAGCCATCAAG GCCTGAATTCCGCA CTC TACAGAATTCAGGC TTTTTAACTTCAGTT TERM 4476 4078970 - 4078929 - R 100 -15.3 -5.26316 | opp_overlap 4078929, overlap 4078930 TTATGCCATAAAAAA CTGCCCCCCAATATCAGGT TATT ATCCAATATTGGGGGGCAA TTCAATTAACCGGCC TERM 4477 4078929 - 4078970 + r 79 -10.9 -3.17075 | opp_overlap 4078929 4078930 TTATGCCATAAAAAA CTGCCCCCCAATATCAGGT TATT ATCCAATATTGGGGGGCAA TTCAATTAACCGGCC TERM 4478 4078969 - 4078930 - R 100 -16.6 -3.75067 | opp_overlap 4078929, overlap 4078929 TATGCCATAAAAAAC TGCCCCCCAATATCAGGT TATT ATCCAATATTGGGGGGCA ATTCAATTAACCGGC accC 4080374 - 4079025 - | acetyl-CoA carboxylase biotin carboxylase subunit accB 4080850 - 4080386 - | acetyl-CoA carboxylase biotin carboxyl carrier protein subunit TERM 4479 4080667 - 4080688 + g 80 -12.3 -3.40403 | GTGCTGGGGCGACGG CGGCAGCCA GCGC TGGCTGCTG TTGTGGTGCAGCAAA aroQ 4081460 - 4081008 - | 3-dehydroquinate dehydratase YPO3661 4082343 - 4081723 - | putative sulfite oxidase subunit YedZ YPO3662 4083443 - 4082343 - | putative sulfite oxidase subunit YedY TERM 4480 4082729 - 4082694 - G 74 -7.4 -4.14257 | opp_overlap 4082695 GCCAACAACCATAAA GGCCAGCGGGTGCATG GCTT CATCCAACCGCAGCCC TTCGACATAGGGGTA TERM 4481 4082755 - 4082769 + g 74 -4.2 -4.82901 | opp_overlap 4082739 GGGTAGTCCAGTCCC CCGC CAATAAA GCGG TTTTTCTGCCCAGGC TERM 4482 4083562 - 4083594 + r 89 -12 -3.26947 | opp_overlap 4083557 4083556 AATATGAAATTTCTA CCACCGAGGCAAGT GTGAA ACTGACCTCGGTGG TTGCTGTAACGATTA yhdH 4084643 - 4083666 - | probable zinc-binding dehydrogenase TERM 4483 4084795 - 4084782 - H 84 -3.8 -5.4433 | AGACAGAAATAAAAA CCCT GTGTTA AGGG TGAGCCAATATAGCG TERM 4484 4085171 - 4085156 - g 76 -5.4 -4.77165 | TGTGCCAGAAGAAAA TGGAAC AACG GCTCCA AAGTATTGTGACCGC yhdA 4085044 - 4086960 + | regulatory protein CsrD TERM 4485 4086962 - 4086952 - f 84 -2.6 -5.63517 | TCCGGAAAGAAAAAA TATT CGT AATA GGGCCATGTTAGCCT TERM 4486 4087529 - 4087544 + G 73 -6 -4.55295 | opp_overlap 4087528 4087530, overlap 4087530 TTCGTCCAATGAAAG ACGGCG TTAT CGCCGA TTTCTTTGTCACGGA TERM 4487 4087543 - 4087530 - g 74 -9.5 -3.54146 | opp_overlap 4087529 4087530, overlap 4087528 TCGTCCAATGAAAGA CGGCG TTAT CGCCG ATTTCTTTGTCACGG TERM 4488 4087530 - 4087543 + G 70 -9.5 -3.32695 | opp_overlap 4087530 4087528, overlap 4087529 TCGTCCAATGAAAGA CGGCG TTAT CGCCG ATTTCTTTGTCACGG envB 4087297 - 4088340 + | rod shape-determining protein MreB mreC 4088544 - 4089539 + | cell wall structural complex MreBCD transmembrane component MreC mreD 4089536 - 4090024 + | rod shape-determining protein MreD maf 4090038 - 4090631 + | Maf-like protein cafA 4090621 - 4092090 + | ribonuclease G TERM 4489 4093715 - 4093694 - g 80 -10.1 -4.07687 | opp_overlap 4093698 AGCCGTGGCTGAAAA TACTGGCGG GCAT CCGCCTGTA TGATGCCACCGATGC TERM 4490 4094652 - 4094631 - g 73 -3 -4.96848 | gap 1 GCCGCTAGATAAAAA CAGCGGTCA GGCAT TG-CCACTG CATGTTCAGGTGAAC YPO3670 4092184 - 4096107 + | hypothetical protein YPO3671 4096104 - 4096973 + | putative carbon-nitrogen hydrolase tldD 4096985 - 4098430 + | protease TldD TERM 4491 4098457 - 4098510 + T 73 -10.5 -2.50699 | overlap 4098455 AATACAATATGGGTA TTAGGCTTTGTTGGCACTGCATTTG ATAC TAAATTTAGTGCCAACAAAGCATCG GTATATTAGTTAACC TERM 4492 4098617 - 4098589 - T 100 -19.1 -2.88861 | opp_overlap 4098589, overlap 4098591 TATTACGGGTATAGA CACCTTCCCTATT CAA AATAGGGAAGGTG TTTAAAATTAATAAA TERM 4493 4098589 - 4098617 + T 100 -19.1 -3.67976 | opp_overlap 4098589 4098591 TATTACGGGTATAGA CACCTTCCCTATT CAA AATAGGGAAGGTG TTTAAAATTAATAAA TERM 4494 4098615 - 4098591 - T 100 -15.9 -2.99471 | opp_overlap 4098589, overlap 4098589 TTACGGGTATAGACA CCTTCCCTATT CAA AATAGGGAAGG TGTTTAAAATTAATA YPO3673 4101491 - 4098633 - | putative insecticidal toxin TERM 4495 4101094 - 4101069 - G 73 -3.1 -4.96848 | opp_overlap 4101069 4101070 4101090, overlap 4101070 TGTGGCATAGAAAAA GCGGTCGGTAA CCGT TTTCAGGCCGC CTTTGGCTTGCTCGT YPO3674 4104551 - 4101516 - | putative insecticidal toxin TERM 4496 4101557 - 4101544 - G 71 -6.7 -4.14627 | opp_overlap 4101542 TTGCTATATAAATAA CGTGA GTAT TCACG TGCTGCTTTTATGTC TERM 4497 4103950 - 4103925 - G 73 -3.1 -4.96848 | opp_overlap 4103925 4103946 TGTGGCATAGAAAAA GCGGTCGGTAA CTGT TTTCAGGCCGC CTTTGGCTTGCTCGT YPO3675 4104907 - 4104548 - | hypothetical protein YPO3676 4105305 - 4104904 - | putative phage-related protein YPO3677 4105620 - 4105318 - | putative phage-related protein TERM 4498 4105740 - 4105714 - R 71 -9.4 -2.90941 | opp_overlap 4105706, overlap 4105703 ATGACAGGGTATAGA GCCTGACCGG GAAGGGG CCGGTTAGGC TCTGCGGCTAATATT tcaC 4110244 - 4105754 - | insecticidal toxin complex TERM 4499 4109368 - 4109386 + g 73 -6 -4.5442 | AGAAGGCGTCCTGAC GGAAATTC CAG GATTTTCC TTTTATGATTACCGG TERM 4500 4110260 - 4110279 + r 83 -11.4 -3.06796 | opp_overlap 4110248, overlap 4110248 4110262 AAAGGGCTCTCCTAT CAGGCCCT CTGT GGGGCCTG TTGACTGAGGTAACG TERM 4501 4110349 - 4110360 + r 75 -2.2 -5.34309 | GATGTCGCTCAGGCT TTGC AGCA GCAG TTTTTGTTTGCTAGT TERM 4502 4111158 - 4111173 + r 71 -4.7 -4.59511 | opp_overlap 4111160 GGCCTTGCTCTAACT CAGCT AAATTC AGCTG TTTTTGCGCCATATT TERM 4503 4113835 - 4113865 + r 70 -2.7 -4.93877 | gap 1, overlap 4113843 4113847 TTAGCAAGATAGTAG TTAACCAAT-GCGT CGCG GCGCGATTCGTTAA TTTTATTTAATACAG YPO3681 4116435 - 4113934 - | putative insecticial toxin TERM 4504 4114021 - 4114031 + g 83 -5.4 -5.18355 | TATTTTAATTATGGT TCCA GGA TGGA TTTTTAATTTTTCAG TERM 4505 4116614 - 4116642 + r 78 -9.1 -3.84185 | TTTTTATTGTTATCT TCTGTTTAACTAA ATT TTAGTTAAACAAA TTGTATTTAACTACG YPO3682 4117537 - 4116671 - | putative lysR-family transcriptional regulatory protein YPO3683 4118709 - 4117798 - | putative DNA-binding transcriptional regulator TERM 4506 4119074 - 4119088 + G 86 -5 -5.22768 | GATATTTCTTGAGCT GCTAAT TTC ATTGGC TTTGTTTTTTGTTGT YPO3684 4119012 - 4119215 + | hypothetical protein yhcQ 4119223 - 4120158 + | p-hydroxybenzoic acid efflux subunit AaeA yhcP 4120160 - 4122115 + | p-hydroxybenzoic acid efflux subunit AaeB TERM 4507 4122254 - 4122276 + F 71 -7 -4.22858 | opp_overlap 4122258, overlap 4122258 CGGTTCGAGCCCTCA TAAAGGCGCT CAC GGCGTCTTTG TTATTTCTCTCTTCT TERM 4508 4122258 - 4122272 + F 75 -5.6 -4.65458 | opp_overlap 4122258, overlap 4122254 TCGAGCCCTCATAAA GGCGCT CAC GGCGTC TTTGTTATTTCTCTC TERM 4509 4122618 - 4122599 - f 82 -7.8 -4.56597 | overlap 4122565 4122600 CTGCCTGGCGAAAAA CGCCCGCT AAAC AGCGAGCA GAGATTTTACAGCGT TERM 4510 4122617 - 4122600 - f 71 -9.1 -3.33744 | overlap 4122565 4122599 TGCCTGGCGAAAAAC GCCCGCT AAAC AGCGAGC AGAGATTTTACAGCG YPO3689 4124060 - 4124518 + | putative ribonuclease YPO3690 4124523 - 4124804 + | putative ribonuclease inhibitor TERM 4511 4124874 - 4124921 + T 100 -10.5 -5.75342 | gap 1, opp_overlap 4124876 GATTACGCCCGCCAA CAGTATTGAGTCGGGAGCCGGG AGTGA CCCGGC-CCCGCCCGATTACTG TTTTTTTTCAGCCAG TERM 4512 4124919 - 4124876 - T 71 -9.5 -3.02144 | gap 1, opp_overlap 4124874 TTACGCCCGCCAACA GTATTGAGTCGGGAGCCGGG AGTGA CCCGGC-CCCGCCCGATTAC TGTTTTTTTTCAGCC YPO3691 4125464 - 4124916 - | hypothetical protein TERM 4513 4125227 - 4125239 + g 70 -4.7 -4.71318 | overlap 4125224 4125227 CAATTAACTGGAGCT GGCGG CGG CGGCC TTCTTTTTTGATCTT TERM 4514 4125227 - 4125242 + g 78 -2.4 -5.30189 | overlap 4125224 4125227 CAATTAACTGGAGCT GGCGGC GGCG GCCTTC TTTTTTGATCTTCTG TERM 4515 4125404 - 4125414 + g 84 -2.4 -5.54907 | CCCAGATAATCTCAT CGTC ATC GTCG TTTTTATTTTCTGGG TERM 4516 4125686 - 4125672 - g 70 -10 -3.3344 | ACTCAAGTTGCAGAA CAGCGT AAA ACGCTG GAACAAGCTGTTGCA pmbA 4125645 - 4126985 + | peptidase PmbA TERM 4517 4127007 - 4127051 + F 70 -5.1 -4.4773 | gap 2, opp_overlap 4127016, overlap 4127016 TCCTGTCATCTTACT GTTC-CAC-AACTCGCGGGTA GAAAA TACCCGCGAGTTTGTATGCGC TTTTCCTTGATATGA TERM 4518 4127016 - 4127040 + F 100 -15.8 -4.08164 | opp_overlap 4127016, overlap 4127007 CTTACTGTTCCACAA CTCGCGGGTA GAAAA TACCCGCGAG TTTGTATGCGCTTTT TERM 4519 4127040 - 4127016 - f 100 -15.8 -3.29511 | opp_overlap 4127016 4127007 CTTACTGTTCCACAA CTCGCGGGTA GAAAA TACCCGCGAG TTTGTATGCGCTTTT TERM 4520 4127721 - 4127734 + G 71 -6.7 -4.24726 | TGTTTATATTAGATT CTGAC GTTG GTCAG TTTTACCCTTATTGT YPO3693 4127240 - 4127878 + | hypothetical protein YPO3694 4128086 - 4128472 + | putative cytochrome TERM 4521 4128597 - 4128629 + T 100 -15.7 -3.83921 | opp_overlap 4128590 4128601 TATAAAAGTGAGCGA TAGAGGGTAATGGCC TGC GGCGGTTACCCTCTA TTATCTTCTATTACC rnk 4129106 - 4128696 - | nucleoside diphosphate kinase regulator TERM 4522 4129040 - 4129027 - G 74 -9.5 -3.54475 | overlap 4129037 GTTGCGACCACAGAA CCGGC AAAA GCCGG TTGCGCTAGCAACGC TERM 4523 4129175 - 4129143 - R 100 -14.1 -5.30339 | opp_overlap 4129148 AGCAAAACATAAAAA CAACACCCCCACGCC ATA GGAGAGGGGGTGTTA GAAAATAGCTTAATG TERM 4524 4129148 - 4129170 + r 76 -10.4 -3.03243 | opp_overlap 4129143 AACATAAAAACAACA CCCCCACGCC ATA GGAGAGGGGG TGTTAGAAAATAGCT TERM 4525 4129374 - 4129340 - R 73 -10 -3.02829 | TATATTTTGCGAATA CGGCTCCATCAGGACA TTT TGCACTGATGGAGTCA CCTATCACCGGCCCT treC 4131126 - 4129459 - | trehalose-6-phosphate hydrolase TERM 4526 4130473 - 4130459 - G 87 -8.5 -4.84359 | overlap 4130437 CCATCGGTATAAAAA CGGCG GCCAT CGCCG TCCAGATCATTAGGG TERM 4527 4131184 - 4131151 - R 75 -5.9 -4.67353 | gap 1, overlap 4131154 4131155 TTATTCATTGAAAAA TGACCCCGCCAGACGA TCA CCG-CTGGCGGGAGAA CACAACTTATATCGA TERM 4528 4131181 - 4131154 - R 89 -12 -3.26405 | gap 1, overlap 4131151 4131155 TTCATTGAAAAATGA CCCCGCCAGACGA TCA CCG-CTGGCGGGA GAACACAACTTATAT TERM 4529 4131180 - 4131155 - R 91 -13.3 -2.55361 | gap 1, overlap 4131154 4131151 TCATTGAAAAATGAC CCCGCCAGACGA TCA CCG-CTGGCGGG AGAACACAACTTATA treB 4132636 - 4131221 - | trehalose(maltose)-specific PTS system components IIBC TERM 4530 4131741 - 4131718 - G 70 -8.8 -3.65143 | overlap 4131716 ACAGGAAACCAAATA GTGCCGCACC GACC GGTGCGAAAC TGCCGGTCATCACCG TERM 4531 4132487 - 4132501 + g 76 -7.2 -4.32436 | overlap 4132483 GCCTTTGACCATTGA GAGATT TTC AATCTC TTTTGGTGATGCTAT TERM 4532 4132940 - 4132953 + r 79 -6.7 -4.66938 | opp_overlap 4132940, overlap 4132936 TTTATTTTTATGGAA TGGGA ACGT TCCCA TTTTGTATTGAAGAT treR 4134000 - 4133047 - | trehalose repressor TERM 4533 4133637 - 4133652 + g 70 -9 -3.63073 | opp_overlap 4133634 4133631 AACCGAACAGGATCA CGCCAT CAAC ATGGCG TTGTTGCAGAATATG TERM 4534 4134131 - 4134161 + r 88 -7 -5.15634 | opp_overlap 4134131 CTGGCAGCATAGGAA TACCCTAACG AATTTTCTCAC CGTTAGGGTA TTTTTTACTGCGGTG YPO3699 4134710 - 4134234 - | hypothetical protein TERM 4535 4134623 - 4134633 + g 79 -6.8 -4.74706 | overlap 4134630 TATCAGGTAATGGGA TGGC GAC GCCA TTTTTGGCTATTGCG YPO3700 4135608 - 4134826 - | transposase/IS protein TERM 4536 4135524 - 4135538 + g 77 -11.4 -3.3506 | overlap 4135537 CTGCCTGTTGTGACA GCGCAG GCG CTGCGC TTATAAGGCTTTCCA y1093 4136627 - 4135605 - | transposase for insertion sequence IS100 TERM 4537 4136649 - 4136631 - H 100 -13.2 -4.01078 | AAAAGTGACCATAAA CTCTCCTG AAT CAGGAGAG CAGATTACCCCCTGG YPO3702 4136714 - 4137028 + | insertion element IS1661 DNA-binding protein (partial) TERM 4538 4137848 - 4137830 - g 71 -11 -2.73735 | overlap 4137820 4137818 4137841 AAACAGGCGGAATGA GTCCGGCA GAA TACCGGAC TCAGGTAGAAAAGCA YPO3703 4137082 - 4137867 + | transposase for insertion sequence IS1661 YPO3705 4139423 - 4138983 - | hypothetical protein YPO3706 4140911 - 4139430 - | hypothetical protein TERM 4539 4139753 - 4139767 + g 74 -8.6 -3.97406 | overlap 4139744 4139765 ACGGCAGTTGCGTGC CCAACT TGT AGTTGG TTTCTGCCATTTTCC TERM 4540 4140227 - 4140208 - G 70 -8.6 -3.80094 | GTCAAACCAAGATAA CGTGAATC TTCA GACTCACG CAGAGCACGCCATTT YPO3707 4141476 - 4140979 - | hypothetical protein TERM 4541 4141116 - 4141143 + g 79 -5.6 -5.01732 | CTAACGCTTCCCGTA GTTCCAGAATTT TTTT GAGCTCTGGAAC TTTTTTCGCCACATT YPO3708 4142000 - 4142518 + | hypothetical protein TERM 4542 4142531 - 4142560 + T 100 -13.7 -4.7871 | overlap 4142532 TAATATTGTATTTCT TCAGCAGCCAATG AGGT TATTGGCTGCTGG TTTTTACTGATGGTT TERM 4543 4142532 - 4142559 + T 100 -15 -3.46141 | overlap 4142531 AATATTGTATTTCTT CAGCAGCCAATG AGGT TATTGGCTGCTG GTTTTTACTGATGGT YPO3709 4143008 - 4142670 - | hypothetical protein TERM 4544 4143386 - 4143369 - R 100 -12.7 -5.41359 | AACCAAACGAAAAAA GGTGCGC CAAG GCGCACC AACCATCCAGCCATA malM 4144348 - 4143419 - | maltose regulon periplasmic protein TERM 4545 4143913 - 4143940 + g 74 -4.9 -4.7497 | gap 1, overlap 4143906 ATTTCATCACGCCTT GCAGGCGATCAT TGATC ATGAT-GCCCGC TTTTTCATAGGTGAA TERM 4546 4144102 - 4144092 - G 79 -8.2 -4.28774 | GCAGGCAAGGCAAAA GCGG CTA CCGC GCCTTCAACCTCACC TERM 4547 4144142 - 4144128 - G 79 -11.4 -3.52906 | opp_overlap 4144127, overlap 4144126 TCACCCTGAGAAATA TGCGGG CTG CCCGCA GTAAGTTGAATATCT TERM 4548 4144559 - 4144540 - R 80 -11.4 -2.66969 | overlap 4144536 4144537 CATCAAGATAACGTA CAGCCGCC CGCA GACGGCTG AAGAATCGCTGTTAC lamB 4145842 - 4144571 - | maltoporin malK 4147022 - 4145913 - | maltose/maltodextrin transporter ATP-binding protein TERM 4549 4146794 - 4146814 + g 70 -11.1 -2.64466 | opp_overlap 4146788, overlap 4146793 GAAACACCATGCCAA TGCCGCGCT CAG AGGGCGGCA CTTCATTCATGCGTT YPO3713 4147262 - 4147026 - | hypothetical protein TERM 4550 4148081 - 4148119 + G 76 -7.5 -4.29738 | gap 1, opp_overlap 4148071 ACAAGTCGCCGCAAC CGGTGAT-GGCCCGGA CATTATCT TCTGGGCCCATGACCG TTTTGGTGGCTATGC malE 4147824 - 4149035 + | maltose ABC transporter periplasmic protein TERM 4551 4149074 - 4149053 - f 95 -11.5 -3.87815 | GTCTACTCTGAGAAA GGGGCACGG TTCG CCGTGCCTC GACAGAATTTGCCAT TERM 4552 4149279 - 4149265 - g 80 -2.1 -5.42198 | gap 1, overlap 4149266 GCCGAAAAAAGAAAA TC-GCC TGGT GGCAGA GTGATGCGCTTAAAT malF 4149222 - 4150799 + | maltose transporter membrane protein malG 4150813 - 4151703 + | maltose transporter permease TERM 4553 4151781 - 4151801 + T 100 -9.6 -5.24799 | overlap 4151782 GGTACTGTGTCTTTA GGGCGGCC TTAAT GGCCGCCA TTTTTATGTTTATCA TERM 4554 4151782 - 4151800 + T 100 -13.1 -3.73253 | overlap 4151781 GTACTGTGTCTTTAG GGCGGCC TTAAT GGCCGCC ATTTTTATGTTTATC yjbA 4152253 - 4151846 - | phosphate-starvation-inducible protein PsiE TERM 4555 4152177 - 4152163 - G 87 -4.2 -5.52384 | overlap 4152142 CCTTCACCAAAAAAA CCACCA AAA TAGCGG CCAACATAATCAATC TERM 4556 4152348 - 4152326 - R 100 -10.6 -5.86332 | TCAAGCCAAAAAAAA GGCCCCTTAC AGA ATAAGAGGCC TAATAAAGTACAGAT pgi 4154034 - 4152388 - | glucose-6-phosphate isomerase TERM 4557 4153749 - 4153768 + g 82 -11.4 -3.75115 | opp_overlap 4153742 4153747 4153749, overlap 4153746 GAGCAATATGCAATA CCGCACGG TCTT CTGTGCGG TTAATTTTCTCACCA lysC 4154404 - 4155789 + | aspartate kinase III TERM 4558 4156036 - 4156018 - f 74 -4.5 -4.89393 | opp_overlap 4156018, overlap 4156008 4156007 TAAACCTCAGAAAAA TGCCTGA GATCA TCGGGCA TTCACTGCTAACACG TERM 4559 4157892 - 4157881 - g 76 -5.8 -4.72272 | opp_overlap 4157887, overlap 4157882 CGTCTCCAGCAAAAA CCAC AGGG GTGG GTCAGCGCTATGGGG hpmB 4156357 - 4158042 + | hemolysin activator protein TERM 4560 4161505 - 4161472 - g 82 -10.9 -3.9344 | AAGCCGAACAGTAAA GACTTTGGCGGCGGC TTGG GCGGCGGCCATAGTC AAGGCAGCACCAGTG TERM 4561 4162206 - 4162182 - g 70 -4.4 -4.67982 | gap 1, overlap 4162185 TGTGACGCAACAAAA CACCCATATCA ACAG TGATA-AGGTG ACCCTGAACAGCGCT TERM 4562 4162516 - 4162503 - g 93 -8.1 -5.13722 | CTTAGGAAAAGAAAA GGACG ATAG CGTCC AGACCATCAGCTATA YPO3721 4158112 - 4163019 + | hemolysin TERM 4563 4163090 - 4163037 - T 80 -8.9 -3.967 | opp_overlap 4163046, overlap 4163045 4163050 AATCCATTAATTAAA CTGTAATATCGAAGGGGATAAACCA ATCA CGGTTTATCCCCCTCGTTAGATCAA CATTATCTCGCCTTT TERM 4564 4163082 - 4163045 - T 100 -15.7 -3.13784 | opp_overlap 4163046, overlap 4163037 4163050 AATTAAACTGTAATA TCGAAGGGGATAAACCA ATCA CGGTTTATCCCCCTCGT TAGATCAACATTATC TERM 4565 4163046 - 4163081 + T 100 -16.3 -3.0701 | opp_overlap 4163045 4163037 4163050 ATTAAACTGTAATAT CGAAGGGGATAAACC AATCAC GGTTTATCCCCCTCG TTAGATCAACATTAT TERM 4566 4163077 - 4163050 - T 100 -15 -3.19293 | opp_overlap 4163046, overlap 4163045 4163037 AACTGTAATATCGAA GGGGATAAACCA ATCA CGGTTTATCCCC CTCGTTAGATCAACA metH 4166810 - 4163115 - | B12-dependent methionine synthase TERM 4567 4164069 - 4164104 + g 87 -7.5 -5.0133 | opp_overlap 4164089 CACCGTTGGGTTATT CCGTGCAGCCTGC AAACTGACCG GCGGGGTGCGCGG TTTTTTACGGGCGTG TERM 4568 4164872 - 4164884 + g 74 -4.1 -4.9218 | CGACCTCGCCACTTT TACTG TCA CGGTA TTTTTCTGCTAAATC TERM 4569 4167230 - 4167245 + r 71 -4.6 -4.71828 | ACCGTTTACTCACGA CCATGC AACA GCAGGG TTTTGTTCGTCAGGT aceK 4169716 - 4167989 - | bifunctional isocitrate dehydrogenase kinase/phosphatase protein TERM 4570 4168146 - 4168127 - G 73 -2.8 -5.0133 | gap 1 CATCTCCTCAAAAAA GTG-CCTGA CTT TCCGGTCAC TGCATAAGAAATGGC TERM 4571 4169761 - 4169738 - R 74 -6.6 -4.4009 | opp_overlap 4169738 4169737, overlap 4169742 CCCTACCGTACAAAA CGGAGCCTGC ATAA GCAGGCTGAG GTTATTGACAAAGTG TERM 4572 4169757 - 4169742 - R 75 -10.4 -2.80345 | opp_overlap 4169738 4169737, overlap 4169738 ACCGTACAAAACGGA GCCTGC ATAA GCAGGC TGAGGTTATTGACAA TERM 4573 4169835 - 4169861 + r 72 -10.1 -2.88849 | gap 1, opp_overlap 4169824, overlap 4169830 4169836 ACATCCATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCTCTGCC TERM 4574 4169836 - 4169862 + r 84 -10.1 -3.82218 | gap 1, opp_overlap 4169824, overlap 4169830 4169835 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCTCTGCCT aceA 4171279 - 4169972 - | isocitrate lyase aceB 4172924 - 4171326 - | malate synthase TERM 4575 4172313 - 4172302 - G 74 -7.2 -4.27843 | opp_overlap 4172305, overlap 4172299 GGCAAATAGAAATAA GGGC CGCT GCCC TTCGCCAGCAGTTGC TERM 4576 4173300 - 4173280 - R 70 -7.5 -3.8165 | opp_overlap 4173279, overlap 4173278 GGGAAGAAAATAATA GGCGGCC TCGATTC AGCCGCC ATAATTAGCATCTAT metA 4174274 - 4173345 - | homoserine O-succinyltransferase TERM 4577 4175003 - 4174971 - H 100 -13.6 -4.62783 | gap 1, opp_overlap 4174971 4174978, overlap 4174978 GACGGATCGCAAAAA CAGAAAAGGCCACCC TAAT GGATGGCC-TTTCTG TTTATTTGATACCTG TERM 4578 4174971 - 4175003 + H 100 -11.4 -4.50627 | gap 1, opp_overlap 4174971 4174978, overlap 4174978 GACGGATCGCAAAAA CAGAAAAGGCCACCC TAAT GGATGGCC-TTTCTG TTTATTTGATACCTG TERM 4579 4174997 - 4174978 - H 100 -11.4 -4.98672 | opp_overlap 4174971 4174978, overlap 4174971 CGCAAAAACAGAAAA GGCCACCC TAAT GGATGGCC TTTCTGTTTATTTGA TERM 4580 4174978 - 4174997 + H 95 -9.2 -4.50993 | opp_overlap 4174978 4174971, overlap 4174971 CGCAAAAACAGAAAA GGCCACCC TAAT GGATGGCC TTTCTGTTTATTTGA TERM 4581 4175481 - 4175471 - H 74 -6.8 -4.27316 | opp_overlap 4175471 TCTCTCAATTCAAAA CACC TTC GGTG TTGTAAGGTTAAGCC TERM 4582 4176593 - 4176604 + H 74 -4.4 -5.06816 | CCACTTTCGTGTTTG CACA GTGC TGTG TTTTTATTAAACAGT TERM 4583 4176640 - 4176666 + H 70 -9.4 -2.75844 | opp_overlap 4176616 4176618, overlap 4176639 4176642 CCAGCTGGTATCTGC GACTGGCTTCAG CTC CAGGAGCTAGTC CTTTCACCTAACGCC TERM 4584 4177100 - 4177118 + H 82 -10.3 -3.57798 | overlap 4177093 CTTGGTCTTCCGGCG TGCGGGT TTTTC ACCCGCA TTATCGTTACTTATG purH 4181118 - 4182707 + | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase TERM 4585 4183777 - 4183809 + G 76 -12 -2.87003 | overlap 4183773 4183773 GGGGGTCGTTTTAGC CGCTGGCGGTTATC CAGCA GATTACCGCCAGGG TGATGTTATTCATGG purD 4182767 - 4184053 + | phosphoribosylamine--glycine ligase yjaH 4184902 - 4184201 - | hypothetical protein TERM 4586 4184876 - 4184863 - G 79 -5.2 -4.99043 | GCTGCATAAACAAAA GGGG TTTTAT CCCC CCCCTGCTTATTATT hupA 4185179 - 4184904 - | transcriptional regulator HU subunit alpha YPO3732 4185958 - 4185368 - | hypothetical protein nfi 4186708 - 4186004 - | endonuclease V TERM 4587 4186516 - 4186500 - G 77 -10.9 -3.56959 | opp_overlap 4186499, overlap 4186491 ATATAAGGCAGAGAA GTTGCCA CTC TGGCAAC CTGGTATTCCACCAG hemE 4187841 - 4186774 - | uroporphyrinogen decarboxylase TERM 4588 4186969 - 4186986 + g 78 -9.9 -3.85698 | AACCGAAGGATCCAT GTTGCCT TGCA AGGCAAC TTTATCACCAACACG TERM 4589 4187663 - 4187645 - G 76 -11 -3.33492 | GCATCCAGCGGATAA CGACGCAG TGG CTGCATCG TGACCTCACAGGCTA YPO3735 4188745 - 4187960 - | hypothetical protein nudC 4189620 - 4188838 - | NADH pyrophosphatase rsd 4189717 - 4190226 + | anti-RNA polymerase sigma 70 factor TERM 4590 4190301 - 4190278 - f 86 -8.9 -4.37886 | opp_overlap 4190286 4190291, overlap 4190291 GTAGCGTGCACAAAA TGAGCAAGC AGAATA GCCTGCTCA TAAGTAGGCTATTGT TERM 4591 4190291 - 4190312 + F 78 -9.5 -3.72152 | opp_overlap 4190278 4190291, overlap 4190286 AATGAGCAAGCAGAA TAGCCTGCT CATA AGTAGGCTA TTGTAGTTTTAATTC YPO3738 4190349 - 4190609 + | hypothetical protein thiC 4190602 - 4192647 + | thiamine biosynthesis protein ThiC TERM 4592 4193079 - 4193101 + G 71 -11.2 -2.71731 | opp_overlap 4193074 4193077 4193076 AGACCAAACAGATGC CGTCATCCCC ACA GGGGTTGGCG TCGTTAAGCCGTCAG thiE 4192661 - 4193308 + | thiamine-phosphate pyrophosphorylase TERM 4593 4193794 - 4193781 - g 74 -4.5 -4.85599 | overlap 4193789 GTCACGGCACAAAAA CCACT AATC AGCGG CAGTGCTGTGGGGTT thiF 4193298 - 4194095 + | thiamine biosynthesis protein ThiF thiG 4194309 - 4195124 + | thiazole synthase TERM 4594 4195838 - 4195848 + G 70 -3.2 -4.86731 | overlap 4195832 ACTGTTATATGCTGG CGGA GCA TCTG TTTTATTTGCAACAA TERM 4595 4196204 - 4196188 - g 70 -4.3 -4.65747 | overlap 4196189 CAAGCGTTAACAAAA GCAGGCT TAC AGCCCGT GTGGAAAGATTGGGA thiH 4195117 - 4196247 + | thiamine biosynthesis protein ThiH TERM 4596 4196285 - 4196272 - T 70 -3.7 -4.74706 | opp_overlap 4196273, overlap 4196273 CGTAATATTGAAAAA CCGCC CGAA GGCGT AATATCAGTGAGTTA YPO3744 4196403 - 4196290 - | hypothetical protein TERM 4597 4196491 - 4196474 - H 100 -9.8 -6.32017 | opp_overlap 4196474 AATAAACAAAAAAAA CGGCCC GAGAAG GGGCCG TTCGTCTCTCAAAAA TERM 4598 4196474 - 4196491 + H 76 -9.8 -3.32022 | opp_overlap 4196474 AATAAACAAAAAAAA CGGCCC GAGAAG GGGCCG TTCGTCTCTCAAAAA TERM 4599 4196502 - 4196533 + H 86 -11.7 -3.28712 | opp_overlap 4196507 4196521 4196523, overlap 4196507 GGCCGTTCGTCTCTC AAAAACCCGCATC CCGAAA GATGCGGGTTTTG TTGTGCCCAGAAAAC TERM 4600 4196528 - 4196507 - H 100 -12.3 -4.56597 | opp_overlap 4196502 4196507, overlap 4196521 4196523 TTCGTCTCTCAAAAA CCCGCATCC CGAA AGATGCGGG TTTTGTTGTGCCCAG TERM 4601 4196507 - 4196528 + H 100 -11.6 -4.77165 | opp_overlap 4196507 4196521 4196523, overlap 4196502 TTCGTCTCTCAAAAA CCCGCATC CCGAAA GATGCGGG TTTTGTTGTGCCCAG TERM 4602 4196566 - 4196548 - H 100 -16 -4.36914 | opp_overlap 4196548, overlap 4196523 4196521 GTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC TERM 4603 4196548 - 4196566 + H 100 -16 -3.07307 | opp_overlap 4196523 4196521 4196548 GTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC tnp 4196679 - 4197137 + | transposase for the IS1541 insertion element TERM 4604 4197215 - 4197239 + T 100 -9.9 -4.51743 | opp_overlap 4197218, overlap 4197217 4197218 ATAGGCGCATATGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTTGGTAGTAG TERM 4605 4197217 - 4197237 + T 100 -12.5 -3.86206 | opp_overlap 4197218, overlap 4197215 4197218 AGGCGCATATGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTTGGTAGT TERM 4606 4197218 - 4197236 + T 100 -16 -2.90639 | opp_overlap 4197218, overlap 4197217 4197215 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTGGTAG TERM 4607 4197236 - 4197218 - T 100 -16 -4.8048 | opp_overlap 4197218 4197217 4197215 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTGGTAG rpoC 4201484 - 4197264 - | DNA-directed RNA polymerase subunit beta' TERM 4608 4199672 - 4199687 + g 70 -2.6 -5.00616 | gap 1 GGTAACACGTGTTCA GC-ATCT TAG AGATAGC TTTTTTACCCAGCGG rpoB 4205641 - 4201613 - | DNA-directed RNA polymerase subunit beta TERM 4609 4201711 - 4201721 + g 79 -5.4 -4.91459 | overlap 4201718 CCATACGGTGATCGC CATC CAC GATG TTTTTGTACATCTTG TERM 4610 4202599 - 4202615 + g 91 -10.9 -4.56314 | CGTCGTACTGCTCTG CCAACTG TTC CAGTTGG TTTTGCTTGTCTTCG TERM 4611 4204987 - 4204973 - G 72 -8.6 -3.9122 | opp_overlap 4204961 CACTTTCTCAAAGAA CAGATC CAA GATCTG TGCAGTGGTGAAATT TERM 4612 4205944 - 4205919 - R 100 -14.1 -4.64766 | CCTACAGCGCAAAAA GGCTGATGACT AAAA AGTCACCAGCC ATCAGCCTATAAAGT rplL 4206352 - 4205984 - | 50S ribosomal protein L7/L12 rplJ 4206916 - 4206419 - | 50S ribosomal protein L10 TERM 4613 4206956 - 4206938 - R 95 -13.2 -3.14132 | TTGCTCCTGGATTAA CCGGAGAA TAA TTCTCCGG AACTCACGTCACCCA TERM 4614 4206994 - 4206973 - R 71 -9.5 -3.06915 | ACTCACGTCACCCAA TTCACGACA AAAT TGCCGTGAA CGAGCGTTGAAACAC TERM 4615 4207038 - 4207073 + r 73 -3.5 -4.94962 | opp_overlap 4207068, overlap 4207068 CAGCAAAGACTATTC TTTATCATTCTTTAT AAACAA ATAAAGAAAGAAAAA TTTTCTTTAGGTTCT TERM 4616 4207078 - 4207068 - R 71 -4 -4.88895 | opp_overlap 4207038 4207068 AAACAAATAAAGAAA GAAA AAT TTTC TTTAGGTTCTGTCAC TERM 4617 4207258 - 4207217 - R 93 -12.6 -3.16553 | gap 1, overlap 4207215 4207219 4207222 4207244 ACAACGATCAACAGA TAGCATGGGCGTAAGATTT TAGAC AAACCTTACGCCCACG-TA AAGCGATAAAAGCAA TERM 4618 4207257 - 4207219 - R 100 -13.3 -3.13565 | overlap 4207217 4207215 4207222 4207244 AACGATCAACAGATA GCATGGGCGTAAGATTT TAGAC AAACCTTACGCCCACGT AAAGCGATAAAAGCA TERM 4619 4207254 - 4207222 - R 100 -15.8 -2.76689 | overlap 4207219 4207217 4207215 4207244 GATCAACAGATAGCA TGGGCGTAAGATTT TAGAC AAACCTTACGCCCA CGTAAAGCGATAAAA rplA 4207985 - 4207281 - | 50S ribosomal protein L1 rplK 4208417 - 4207989 - | 50S ribosomal protein L11 TERM 4620 4208567 - 4208539 - R 100 -16.2 -5.2853 | CATCTAAAAACAAAA GGCGCGAAATTA TATTT TAATTTCGCGCC TAAGACAAGACTCAA nusG 4209153 - 4208608 - | transcription antitermination protein NusG TERM 4621 4209222 - 4209179 - R 74 -6.8 -4.25056 | gap 1, overlap 4209188 CAGGCCAGTAATAAA TGATACCAAGCGGACTAGGAT ACC ATCC-AGTCCCCATAGAATCA GTGACATTACAGCAG secE 4209538 - 4209155 - | preprotein translocase subunit SecE TERM 4622 4209597 - 4209573 - R 79 -7.9 -4.28115 | overlap 4209566 4209574 ATTCAGAACAAACAA CTTTGCTTCGC ATC GCAAAGCAAAC CAAGCCGAAGGATGC TERM 4623 4209596 - 4209574 - R 84 -11.4 -3.15784 | overlap 4209566 4209573 TTCAGAACAAACAAC TTTGCTTCGC ATC GCAAAGCAAA CCAAGCCGAAGGATG TERM 4624 4209747 - 4209764 + r 100 -11.3 -4.41548 | opp_overlap 4209747 TGCAACGTATAAAAA GGGCATC AAAT GATGCCC TTTTATCGCATGTCG TERM 4625 4209764 - 4209747 - R 100 -11.3 -4.91712 | opp_overlap 4209747 TGCAACGTATAAAAA GGGCATC AAAT GATGCCC TTTTATCGCATGTCG tuf 4210973 - 4209789 - | elongation factor Tu YPO3755 4212812 - 4212030 - | transposase/IS protein TERM 4626 4212728 - 4212742 + g 77 -11.4 -3.3506 | overlap 4212741 CTGCCTGTTGTGACA GCGCAG GCG CTGCGC TTATAAGGCTTTCCA y1093 4213831 - 4212809 - | transposase for insertion sequence IS100 TERM 4627 4213853 - 4213835 - H 100 -13.2 -4.01078 | AAAAGTGACCATAAA CTCTCCTG AAT CAGGAGAG CAGATTACCCCCTGG YPO3757 4213921 - 4214472 + | putative acetyltransferase TERM 4628 4214619 - 4214593 - f 91 -8 -4.8048 | opp_overlap 4214594, overlap 4214594 TGTCTACACCAAAAA CCAAGCTGCCTA TAA TATGCAGCTTGT TTCTTATCTGGAGTT TERM 4629 4214594 - 4214618 + F 100 -11.5 -4.39329 | opp_overlap 4214593 4214594 GTCTACACCAAAAAC CAAGCTGCCTA TAA TATGCAGCTTG TTTCTTATCTGGAGT TERM 4630 4214618 - 4214594 - f 89 -11.5 -3.47806 | opp_overlap 4214594, overlap 4214593 GTCTACACCAAAAAC CAAGCTGCCTA TAA TATGCAGCTTG TTTCTTATCTGGAGT TERM 4631 4214813 - 4214789 - g 73 -5.7 -4.55093 | TGACAGAAGAAGAAA TCGTTAAACTC AAA GGGATTAACGA AGACCTTTCATTAGA TERM 4632 4215132 - 4215118 - g 100 -8.6 -5.5604 | opp_overlap 4215118 CTAATGAAGAAAAAA GGATTC CCG GAATCC TATGATATGCATAAT coaA 4214683 - 4215633 + | pantothenate kinase TERM 4633 4215641 - 4215658 + T 71 -9.9 -2.63723 | opp_overlap 4215638 4215635 4215631, overlap 4215640 GAAAATAATCTATAC GGGAGAT AGTT ATCTCCC ATTAATTAATCAGAC birA 4216627 - 4215668 - | biotin--protein ligase murB 4217661 - 4216624 - | UDP-N-acetylenolpyruvoylglucosamine reductase TERM 4634 4218106 - 4218088 - R 100 -8.1 -5.24989 | opp_overlap 4218088 4218080 GCACACAGCAAAAAA CCCACGC TTTGG GCATGGG GTCTTGGCTTTATTT TERM 4635 4218345 - 4218335 - R 74 -6.8 -4.27316 | opp_overlap 4218335 TCTCTCAATTCAAAA CACC TTC GGTG TTGTAAGGTTAAGCC TERM 4636 4219457 - 4219468 + r 74 -4.4 -5.06816 | CCACTTTCGTGTTTG CACA GTGC TGTG TTTTTATTAAACAGT TERM 4637 4219504 - 4219530 + r 70 -9.4 -2.75844 | opp_overlap 4219480 4219482, overlap 4219503 4219506 CCAGCTGGTATCTGC GACTGGCTTCAG CTC CAGGAGCTAGTC CTTTCACCTAACGCC TERM 4638 4219964 - 4219982 + r 82 -10.3 -3.57798 | overlap 4219957 CTTGGTCTTCCGGCG TGCGGGT TTTTC ACCCGCA TTATCGTTACTTATG hemG 4224331 - 4223798 - | protoporphyrinogen oxidase trkH 4225804 - 4224353 - | potassium transporter TERM 4639 4225273 - 4225284 + g 81 -5.8 -4.95302 | opp_overlap 4225273 TAGCCGTTTCAGCAA TGCG GGGC CGCA TTTTATTATCTTTCA TERM 4640 4225564 - 4225545 - G 95 -5 -5.55769 | TCTGAGAATAAAAAA GGTAATGC CCCG ACACTACC CAACACCGTCCAAAA TERM 4641 4226315 - 4226291 - R 88 -9.9 -4.16842 | opp_overlap 4226294, overlap 4226293 4226294 GGGACCGGCAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCATATGCGCCTAT TERM 4642 4226313 - 4226293 - R 100 -12.5 -3.68324 | opp_overlap 4226294, overlap 4226291 4226294 GACCGGCAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 4643 4226294 - 4226312 + r 100 -16 -4.8048 | opp_overlap 4226293 4226291 4226294 ACCGGCAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 4644 4226312 - 4226294 - R 100 -16 -2.80512 | opp_overlap 4226294, overlap 4226293 4226291 ACCGGCAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC tnp 4226851 - 4226393 - | transposase for the IS1541 insertion element TERM 4645 4226964 - 4226982 + r 100 -16 -4.36914 | opp_overlap 4226964 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAC TERM 4646 4226982 - 4226964 - R 100 -16 -3.07307 | opp_overlap 4226964 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAC TERM 4647 4227021 - 4227002 - R 100 -11.4 -4.77165 | opp_overlap 4227000 4226996 CTGGGCACAACAAAA GCCCAGCA ATGA TGCCGGGC CGTTGGATGTTGTTG pepQ 4228496 - 4227165 - | proline dipeptidase TERM 4648 4228409 - 4228376 - G 74 -2.6 -5.1356 | overlap 4228377 4228378 GGTCATCAAGAAAAA GCCGCTG-TAATTCAC CAGA GTGAATCAGCAACG-C ATCTAATTGATGACG TERM 4649 4228542 - 4228568 + H 79 -8 -4.31835 | opp_overlap 4228543, overlap 4228543 TTTTTATCTTATCAT AGTCACCGAAAC CAT GTTTCGATGACG TTTATTCTACAAATT TERM 4650 4228567 - 4228543 - H 93 -13.7 -2.79796 | opp_overlap 4228543 4228542 TTTTATCTTATCATA GTCACCGAAAC CAT GTTTCGATGAC GTTTATTCTACAAAT TERM 4651 4228543 - 4228567 + H 84 -11.5 -3.18378 | opp_overlap 4228543, overlap 4228542 TTTTATCTTATCATA GTCACCGAAAC CAT GTTTCGATGAC GTTTATTCTACAAAT TERM 4652 4229085 - 4229102 + G 76 -8.5 -4.1899 | opp_overlap 4229074 4229073, overlap 4229077 AACTGCACCAGTGGC TGGTGTT CGCC AACACCA TTTTCAATCGACTGG TERM 4653 4230286 - 4230273 - g 74 -8.1 -4.05033 | opp_overlap 4230272 4230269 CTTACGCTACACAAA TGGGG AAAA CCCCA ATTGTTGTCAATGAT TERM 4654 4230971 - 4230983 + G 70 -9.1 -3.50335 | AGTTATTATCCTGTG GCAGC AGC GCTGC TTGATGTTTCTACCA fadB 4228823 - 4231012 + | multifunctional fatty acid oxidation complex subunit alpha TERM 4655 4231067 - 4231085 + G 79 -8 -4.33274 | TGCGTACACCGATGG GCCGCTCC AAA GGGGGGGC TTTTCGTCATGTACG fadA 4231024 - 4232187 + | 3-ketoacyl-CoA thiolase TERM 4656 4232315 - 4232333 + T 73 -8.8 -3.56814 | overlap 4232318 TTTAGTTGCTATTTC CCCGCC GGTCAGA GGCGGG CTTTTTATCGCTTTT TERM 4657 4232318 - 4232334 + T 82 -5.7 -4.97402 | overlap 4232315 AGTTGCTATTTCCCC GCCGGTC AGA GGCGGGC TTTTTATCGCTTTTA fre 4233048 - 4232347 - | FMN reductase YPO3769 4234599 - 4233103 - | 3-octaprenyl-4-hydroxybenzoate decarboxylase rfaH 4234847 - 4235335 + | transcriptional activator RfaH TERM 4658 4235423 - 4235385 - T 73 -8.9 -3.56273 | opp_overlap 4235389 4235397, overlap 4235386 4235389 CTCATCATTATAGAA TTCATTCAGATAGGCGC AGTTA GTGCCTATCTGAATGCT GTGACTCTTAGTTAT TERM 4659 4235422 - 4235386 - T 88 -12.4 -2.73443 | opp_overlap 4235389 4235397, overlap 4235385 4235389 TCATCATTATAGAAT TCATTCAGATAGGCGC AGTTA GTGCCTATCTGAATGC TGTGACTCTTAGTTA TERM 4660 4235419 - 4235389 - T 88 -12.7 -2.64051 | opp_overlap 4235389 4235397, overlap 4235386 4235385 TCATTATAGAATTCA TTCAGATAGGCGC AGTTA GTGCCTATCTGAA TGCTGTGACTCTTAG TERM 4661 4235389 - 4235419 + T 100 -14.9 -2.66787 | opp_overlap 4235389 4235386 4235385, overlap 4235397 TCATTATAGAATTCA TTCAGATAGGCGC AGTTA GTGCCTATCTGAA TGCTGTGACTCTTAG hemB 4236467 - 4235445 - | delta-aminolevulinic acid dehydratase TERM 4662 4236507 - 4236487 - R 86 -10.3 -3.75153 | opp_overlap 4236486 4236485 4236487 TTCTCCTAACTCAAA CCAGCCGGA AAA CCCGGCGGG CGTTTTCATCAGTTT YPO3773 4237638 - 4236856 - | transposase/IS protein TERM 4663 4237554 - 4237568 + g 77 -11.4 -3.3506 | overlap 4237567 CTGCCTGTTGTGACA GCGCAG GCG CTGCGC TTATAAGGCTTTCCA y1093 4238657 - 4237635 - | transposase for insertion sequence IS100 TERM 4664 4238679 - 4238661 - R 100 -13.2 -4.01078 | AAAAGTGACCATAAA CTCTCCTG AAT CAGGAGAG CAGATTACCCCCTGG TERM 4665 4239258 - 4239243 - R 100 -11.8 -4.45168 | GTTCCAAAACAGAAA CCGCCC AGAA GGGCGG CTAAATATCAACGCA tatC 4240055 - 4239279 - | twin-arginine protein translocation system subunit TatC TERM 4666 4239982 - 4239968 - G 81 -6.4 -4.98436 | opp_overlap 4239968 4239969, overlap 4239969 CCAATACCAGAAAAA CCACCA AAA TGGTGA TTATACAATTCAGTA mtta2 4240720 - 4240058 - | Sec-independent protein translocase protein TatB YPO3778 4240990 - 4240724 - | Sec-independent protein translocase protein TatA ubiB 4242801 - 4241170 - | putative ubiquinone biosynthesis protein UbiB TERM 4667 4241432 - 4241445 + g 71 -5.2 -4.48449 | overlap 4241435 4241437 TCAGGGAATTTTTCA GCCC AGAAAG GGGC TTTCTCTTTTAATGC YPO3780 4243433 - 4242801 - | hypothetical protein ubiE 4244220 - 4243465 - | ubiquinone/menaquinone biosynthesis methyltransferase TERM 4668 4244303 - 4244279 - R 72 -7.7 -3.75015 | AGAACTCCGATGAAA GCCCCACACCC CCT GGTTGCGGTGC CAATTAAATTACTCT rumC 4245745 - 4244312 - | putative DNA recombination protein YPO3783 4246555 - 4246025 - | hypothetical protein TERM 4669 4246215 - 4246202 - G 74 -2.3 -5.07107 | overlap 4246192 GAAACGGCCAAAAAA GGCCC CAAA GAACC CCCAACGCTCGAAGA TERM 4670 4246798 - 4246771 - R 100 -13.6 -5.5074 | opp_overlap 4246775 TAACTTAACAAAAAA TAAACGGCTAGA AGAT TCCAGCCGTTTA AACAAATTAGCACAA YPO3784 4248644 - 4246827 - | putative carbon starvation protein TERM 4671 4247099 - 4247083 - G 77 -12.3 -3.10895 | GTCAACATATACACA CGCTTGG TCG CCAAGCG CAGGATAATCGTGGC TERM 4672 4247815 - 4247802 - G 76 -8.1 -4.15222 | ACCGCCGTGAATAAA CTGCG TAAC CGCAG GGAATTGAATTTCAG TERM 4673 4248586 - 4248567 - G 95 -6.4 -5.5112 | overlap 4248569 CTTACGAACAAAAAA GATACCGT ATAA ACGGTAGC AGATCGTAAGGATAC TERM 4674 4248584 - 4248569 - G 76 -7.6 -4.39002 | overlap 4248567 TACGAACAAAAAAGA TACCGT ATAA ACGGTA GCAGATCGTAAGGAT YPO3785 4249832 - 4249002 - | hypothetical protein TERM 4675 4249919 - 4249900 - R 100 -11.4 -4.36862 | AGATGAAATAAAGAA CGGGCCAG TAAA CTGACCCG AGAACAAACCCTCTA udp 4250714 - 4249953 - | uridine phosphorylase TERM 4676 4251526 - 4251538 + G 76 -7.7 -4.29738 | opp_overlap 4251525 CTGGTAAAAAAAGTC CCTGA TCG TCAGG TTTTGGTGGATCTCG TERM 4677 4251760 - 4251775 + G 70 -10.4 -2.88544 | GCTATCGATCTCTGC GCCCCA GTGT TGGGGC TATATGGAGGTAAAG YPO3787 4251211 - 4252014 + | putative carboxymethylenebutenolidase TERM 4678 4252034 - 4252019 - T 100 -11.8 -5.52096 | AAACGCAATAAAAAA GGGCGC GAAA GCGCCC CAAAAGCCCCACTAC metE 4254345 - 4252069 - | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase yigM 4256191 - 4255292 - | hypothetical protein metR 4254451 - 4255404 + | lysR-family transcriptional regulatory protein TERM 4679 4256078 - 4256066 - GT 70 -3.3 -4.89729 | overlap 4256071 CAGAAAAGGCAAAAA GACCA GTG CGGCC AGCCCGACACGCATC YPO3791 4257499 - 4256573 - | hypothetical protein TERM 4680 4257524 - 4257558 + r 85 -5.7 -5.18726 | CCTGTCAGGCCGGGC CAGGTCAGCCCGT AAATGTAAG AATGGCTGACCTG TTTTTATTATGGCGG ugpQ 4258349 - 4257600 - | cytoplasmic glycerophosphodiester phosphodiesterase ugpC 4259419 - 4258346 - | glycerol-3-phosphate transporter ATP-binding subunit TERM 4681 4258427 - 4258437 + g 71 -6.8 -4.25056 | opp_overlap 4258422, overlap 4258424 ATGCAATGTACTGCC TGCC ACT GGCA TTTCTTCATGGGATA TERM 4682 4258476 - 4258454 - G 70 -9.8 -3.32844 | TTCTTCATGGGATAA GCGAGCAATG ATA CTTTGCCCGC CCCACAGGCCGTGCG TERM 4683 4258763 - 4258789 + g 74 -7.9 -4.2461 | opp_overlap 4258756 TTTATAAACCTCGCT GGGGGTACCGA TTTGC TCGGCAACCCC TTTGTTCATCACAAT ugpE 4260271 - 4259426 - | glycerol-3-phosphate transporter membrane protein TERM 4684 4259494 - 4259479 - G 71 -6.8 -4.25256 | GCTGCATCAAAAGAA CCACCA CGAC CGGTGG AATTAAAGTCAAAAT TERM 4685 4260043 - 4260033 - G 76 -5.4 -4.81863 | AAAGCCATAACAAAA CTGT TCA ACAG CATCAACCCGAAAGG ugpA 4261155 - 4260268 - | glycerol-3-phosphate transporter permease ugpB 4262772 - 4261453 - | glycerol-3-phosphate transporter periplasmic binding protein TERM 4686 4262026 - 4262037 + g 100 -5.8 -5.5353 | opp_overlap 4262026 4262024 TTTACGGCCAAAATA GGTG AAAT CACC TTTTTTATTCATATC TERM 4687 4263154 - 4263141 - H 70 -5.3 -4.55689 | ATCATTCAGACAAAA TGGTA TAAT TACCA CTTGAAATAACGTTA YPO3797 4263327 - 4263818 + | hypothetical protein TERM 4688 4263884 - 4263856 - f 71 -9 -3.4052 | gap 1, opp_overlap 4263856 4263858 4263860 TGTTAATTTAATGAA TACAGCCATGGAA TTAT CTCC-TGGCTGTA TATATCTGTCATACT TERM 4689 4265215 - 4265181 - g 87 -4.8 -5.49809 | overlap 4265183 CAAAGGGTAAAAAAA CGCCCCGTTTAGTCCA GTT TGGACGCAGCAGGGTG ATAGAAAGCGTACAA YPO3798 4264085 - 4266418 + | hypothetical protein TERM 4690 4266589 - 4266575 - gf 72 -9.2 -3.22475 | opp_overlap 4266575, overlap 4266573 TGCAGGTGTATAACA GCGGCG ATA CACCGC TTTATCTGGATATCA TERM 4691 4266575 - 4266589 + GF 71 -7 -4.07868 | opp_overlap 4266575 4266573 TGCAGGTGTATAACA GCGGCG ATA CACCGC TTTATCTGGATATCA YPO3799 4266436 - 4267122 + | hypothetical protein YPO3800 4267094 - 4267741 + | hypothetical protein TERM 4692 4268264 - 4268250 - g 79 -9.2 -4.13728 | CAGATATCCGCAAAA GCCCCC GCT GGGGAC AATACTGCGGGGAAA YPO3801 4267803 - 4268321 + | hypothetical protein YPO3802 4268434 - 4269540 + | hypothetical protein YPO3803 4270116 - 4269655 - | hypothetical protein livF 4271045 - 4270344 - | leucine/isoleucine/valine transporter ATP-binding subunit livG 4271857 - 4271090 - | leucine/isoleucine/valine transporter ATP-binding subunit livM 4273140 - 4271854 - | leucine/isoleucine/valine transporter permease subunit TERM 4693 4272184 - 4272205 + g 73 -8.7 -3.71672 | ACCTGCAAAGGCCGC GCTGATGGT AAAT GCCGTCAGC TTAATTTTGGTCGGG livH 4274063 - 4273137 - | branched-chain amino acid transporter permease subunit LivH TERM 4694 4274154 - 4274134 - R 100 -10.4 -4.70659 | CTGTAGAGGGAAAAA TCCCCCCG GAATA CGAGGGGA TGCAGTTGATAGAAG livJ 4275359 - 4274244 - | branched-chain amino acid-binding protein TERM 4695 4274354 - 4274365 + g 74 -7.2 -4.17023 | overlap 4274345 4274344 CCATCACGGTCTCAA CCGG TTTG CCGG TTTTCAGATCGTTAG TERM 4696 4274992 - 4275011 + g 80 -12.2 -3.39717 | GCGTTTGTAGCAGCA GGGGTGAT CATT ATCACCCC TTCATCTTCATAAAT TERM 4697 4275879 - 4275901 + G 70 -4.8 -4.73388 | opp_overlap 4275862 TGCTGCCTGGCAACA GTGGATTACT GAG GGTAGACCAC TTTTTGCTGCACGTT yhhK 4275781 - 4276173 + | putative acetyltransferase TERM 4698 4276345 - 4276313 - T 100 -11.3 -5.41143 | opp_overlap 4276320, overlap 4276319 4276320 TATCTGCCAAAAAAA TAAATATCCTCCGGC ATA GCCGGAGGTTTTTCA TATGCGCCTATAAGG TERM 4699 4276339 - 4276319 - T 100 -12.5 -4.21073 | opp_overlap 4276320, overlap 4276313 4276320 CCAAAAAAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 4700 4276320 - 4276338 + T 100 -16 -4.8048 | opp_overlap 4276319 4276313 4276320 CAAAAAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 4701 4276338 - 4276320 - T 100 -16 -3.10203 | opp_overlap 4276320, overlap 4276319 4276313 CAAAAAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC tnp 4276877 - 4276419 - | transposase for the IS1541 insertion element TERM 4702 4276990 - 4277008 + r 100 -16 -4.36914 | opp_overlap 4276990 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAGC TERM 4703 4277008 - 4276990 - R 100 -16 -3.07307 | opp_overlap 4276990 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAGC TERM 4704 4277048 - 4277028 - R 100 -11.2 -4.34402 | opp_overlap 4277028 CTGGGCACAGCAAAA GGGCGATA ATCAA TATCGCCC TTCTTTATCGTGCCG TERM 4705 4277028 - 4277048 + r 93 -11.2 -4.11183 | opp_overlap 4277028 CTGGGCACAGCAAAA GGGCGATA ATCAA TATCGCCC TTCTTTATCGTGCCG rpoH 4277948 - 4277091 - | RNA polymerase factor sigma-32 TERM 4706 4277510 - 4277524 + g 71 -7.8 -4.09739 | opp_overlap 4277506, overlap 4277506 CCTGATTAAACCAGC CCAGGC GCT GCTTGG TTTTACGCAGGTTGA ftsX 4279212 - 4278259 - | cell division protein FtsX ftsE 4279870 - 4279202 - | cell division protein FtsE ftsY 4281501 - 4279876 - | cell division protein TERM 4707 4280131 - 4280151 + g 80 -3.1 -5.26875 | opp_overlap 4280127, overlap 4280132 TGTCAGCATAACCTC ATGGGGGGC GTC GCCGTCCAG TTTTTTCATTACCCG TERM 4708 4281420 - 4281438 + g 85 -12.4 -3.70773 | overlap 4281416 CTTCTTTTTCAGTCG CCAGCGGC TCT GCTGCTGG TTCTTCACTCTGACG YPO3815 4281530 - 4281673 + | hypothetical protein YPO3816 4281783 - 4282445 + | 16S rRNA m(2)G966-methyltransferase TERM 4709 4282465 - 4282476 + G 78 -2.2 -5.32882 | overlap 4282461 4282459 GGCCGGTTACTGATG CTAG GCGT CTGG TTTTTTATACTGCTG yhhL 4282435 - 4282707 + | hypothetical protein YPO3817 4283313 - 4282894 - | hypothetical protein TERM 4710 4283220 - 4283232 + g 80 -3.3 -5.252 | GTGCGCGATCATTTT CTGCA TCC TGCTG TTTTTTCTGCCAATA YPO3818 4283845 - 4283525 - | hypothetical protein yhhN 4284135 - 4284761 + | hypothetical protein zntA 4285175 - 4287541 + | zinc/cadmium/mercury/lead-transporting ATPase YPO3821 4287879 - 4287625 - | cell developmental protein SirA yhhQ 4288163 - 4288831 + | hypothetical protein dcrB 4288961 - 4289488 + | hypothetical protein TERM 4711 4289499 - 4289523 + T 100 -13.6 -4.72631 | opp_overlap 4289489 4289503 AATAATCTGTCCCAG CAGAGCGCGG TTCAC TCGCGCTCTG TTTTATTGACTTACT glpC 4290945 - 4289650 - | sn-glycerol-3-phosphate dehydrogenase subunit C glpB 4292216 - 4290942 - | anaerobic glycerol-3-phosphate dehydrogenase subunit B glpA 4293861 - 4292206 - | sn-glycerol-3-phosphate dehydrogenase subunit A glpQ 4294486 - 4295601 + | glycerophosphodiester phosphodiesterase TERM 4712 4295689 - 4295708 + T 81 -4.4 -5.41143 | gap 1 ATTATTCAACGTGAC TCACTA-CA TTC TGATAGTGA TTTTTTTCACCCATG YPO3828 4296727 - 4295675 - | hypothetical protein TERM 4713 4297105 - 4297087 - R 95 -12.4 -3.28041 | AACGCCAAGGAGGAA GGGTGACC AAA GGCCACCC TACTCCACAGCATCA YPO3829 4297952 - 4297143 - | putative sugar phosphatase pldB 4299000 - 4297987 - | lysophospholipase L2 TERM 4714 4298036 - 4298023 - G 71 -5.2 -4.56775 | overlap 4298031 ATGTTGCGCGAAAAA GCGC AATATG GCGC TAAGCGCCTCGGCAC rhtB 4299196 - 4299816 + | homoserine/homoserine lactone efflux protein TERM 4715 4299871 - 4299820 - T 84 -10.9 -3.66216 | gap 1, opp_overlap 4299839, overlap 4299818 4299821 CGCAAAGTATAAAGA GCCTGTCAGGCTAGCCAACCGGGT TAAAT ACCCCGTTGGCTAACCCGTTAG-C GGGACAATATCAGTT TERM 4716 4299871 - 4299821 - T 77 -11.1 -2.79007 | opp_overlap 4299839, overlap 4299818 4299820 GCAAAGTATAAAGAG CCTGTCAGGCTAGCCAACCGGGT TAAAT ACCCCGTTGGCTAACCCGTTAGC GGGACAATATCAGTT rhtC 4300487 - 4299867 - | threonine efflux system recQ 4302426 - 4300594 - | ATP-dependent DNA helicase RecQ TERM 4717 4302480 - 4302448 - R 95 -14.2 -2.86164 | gap 1, opp_overlap 4302454 4302456 CCCCCAACTATTAGA TCTG-CACAGGCCGG CTAA CCGGCCTGTGTCTGA AACTGTGATAACGCC TERM 4718 4302454 - 4302473 + r 100 -15 -2.89191 | opp_overlap 4302448, overlap 4302456 ACTATTAGATCTGCA CAGGCCGG CTAA CCGGCCTG TGTCTGAAACTGTGA TERM 4719 4302456 - 4302471 + r 86 -11.8 -2.99649 | opp_overlap 4302448, overlap 4302454 TATTAGATCTGCACA GGCCGG CTAA CCGGCC TGTGTCTGAAACTGT pldA 4303382 - 4302504 - | phospholipase A YPO3835 4303604 - 4304074 + | hypothetical protein TERM 4720 4304387 - 4304401 + G 83 -9.2 -4.41494 | overlap 4304388 AGCGCCTATTGTTAC TGGCGG TGA CCGCCG TTTTGATTGCCAGTA TERM 4721 4304388 - 4304400 + G 73 -10.5 -3.24414 | overlap 4304387 GCGCCTATTGTTACT GGCGG TGA CCGCC GTTTTGATTGCCAGT rarD 4304161 - 4305051 + | hypothetical protein TERM 4722 4305066 - 4305110 + T 100 -11.7 -5.5604 | gap 2, opp_overlap 4305066 AGATGCCGAAAAAAA GCCCGGTTACTCAATATTGGG GTTAG TCCAAT-T-GAGTGACCGGGC TTTTTTATTCGTTGC TERM 4723 4305110 - 4305066 - T 100 -8.8 -5.42862 | gap 2, opp_overlap 4305066 AGATGCCGAAAAAAA GCCCGGTTACTCAATATTGG GGTTAGT CCAAT-T-GAGTGACCGGGC TTTTTTATTCGTTGC corA 4306099 - 4305149 - | magnesium/nickel/cobalt transporter CorA TERM 4724 4305923 - 4305909 - G 85 -3.5 -5.42259 | gap 1, overlap 4305911 TCATCTTCAAAAAAA CG-GGC CGAA GCCTCG ATATCGTCCAACTCT TERM 4725 4306664 - 4306643 - R 100 -7.3 -5.85178 | opp_overlap 4306643 AAGACCCAAAAAAAA CCGAAGTCA GTAA CAACTTCGG TTTTGCGTACCCTGC YPO3838 4307590 - 4306748 - | hypothetical protein YPO3839 4308821 - 4307604 - | hypothetical protein TERM 4726 4308582 - 4308571 - G 73 -5.8 -4.46212 | CGGCTCACCATAAAA CGCT CGAA AGCG ATAGCCATAGCATTA YPO3840 4309249 - 4309935 + | putative TetR-family regulatory protein TERM 4727 4310036 - 4310010 - T 76 -9.4 -3.40971 | overlap 4310008 AAATAAAAATAGATA GGTGGCCGCACT GAC ACTGCAACCACC ACAAATATCAGATTA uvrD 4312211 - 4310049 - | DNA-dependent helicase II TERM 4728 4311745 - 4311755 + g 70 -8.2 -3.66995 | CTCTCAATATGTTGC GGGC GCA GCCC TTCGTCTTTTTTGCC TERM 4729 4312160 - 4312140 - G 85 -12.5 -3.75024 | opp_overlap 4312142 4312144 4312147 GGCCAGTACCAACAA GTTGCCGCG CGG CGCGGCCAC GGCGTCACGTTGTTT TERM 4730 4312144 - 4312172 + g 74 -4.3 -4.86621 | opp_overlap 4312140, overlap 4312142 4312147 AGTACCAACAAGTTG CCGCGCGGCGCGG CCA CGGCGTCACGTTG TTTTTCATTCAGGCT TERM 4731 4312147 - 4312169 + g 76 -6.8 -4.53777 | opp_overlap 4312140, overlap 4312142 4312144 ACCAACAAGTTGCCG CGCGGCGCGG CCA CGGCGTCACG TTGTTTTTCATTCAG YPO3842 4313029 - 4312313 - | flavin mononucleotide phosphatase TERM 4732 4312945 - 4312920 - G 74 -4 -5.0133 | gap 1, overlap 4312921 4312922 4312924 TACTGTTGTAAAAAA GCCACAGACTG CTGTT CAGTCCGCG-C GATCACTGGCCGATT xerC 4313940 - 4313029 - | site-specific tyrosine recombinase XerC YPO3844 4314641 - 4313937 - | hypothetical protein dapF 4315530 - 4314706 - | diaminopimelate epimerase TERM 4733 4315105 - 4315077 - G 73 -11.7 -2.64616 | overlap 4315086 TGCCCATCGACACCA CGCCACACAGCAC CGT ATGCTCTGCGGCG CGTAAAATATAGGTT YPO3846 4315902 - 4315714 - | putative lipoprotein cyaY 4316054 - 4316374 + | frataxin-like protein TERM 4734 4316414 - 4316394 - T 73 -2.5 -5.14965 | overlap 4316395 AGTTGGATCAAAAAA GGACACG ATTTTTA CGTGTCA GACTGCTGACAAACC TERM 4735 4316500 - 4316474 - T 84 -10.1 -3.82218 | gap 1, opp_overlap 4316483, overlap 4316475 4316490 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 4736 4316501 - 4316475 - T 72 -10.1 -2.88849 | gap 1, opp_overlap 4316483, overlap 4316474 4316490 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT cyaA 4319170 - 4316618 - | adenylate cyclase TERM 4737 4319536 - 4319562 + H 78 -2.3 -5.4477 | overlap 4319534 4319541 GTCATGCATCCATTA CAATCGTTGTA TTCAT TGCAACAGTTG TTTTTTTAGGCATTT hemC 4319664 - 4320605 + | porphobilinogen deaminase TERM 4738 4321118 - 4321136 + G 77 -11 -3.43203 | AGCGAACAAAGTGCT CACTGGCA ACG TGCCGGTG TTGATATTCTGGTGG hemD 4320602 - 4321351 + | uroporphyrinogen-III synthase TERM 4739 4322124 - 4322134 + G 71 -6.8 -4.19024 | opp_overlap 4322124 AGAATCTGAGCAAAA GCTG GCA CAGC TTTATGTCTGATTTC TERM 4740 4322134 - 4322124 - g 74 -6.8 -4.28762 | opp_overlap 4322124 AGAATCTGAGCAAAA GCTG GCA CAGC TTTATGTCTGATTTC hemX 4321382 - 4322506 + | putative uroporphyrinogen III C-methyltransferase hemY 4322509 - 4323729 + | putative protoheme IX biogenesis protein TERM 4741 4323848 - 4323816 - T 100 -11.3 -4.19704 | opp_overlap 4323823, overlap 4323820 4323822 4323823 GAAGCGCACCCAAAA TAAATATCCTCCGGC ATA GCCGGAGGTTTTTCA TATGCGCCTATAAGG TERM 4742 4323844 - 4323820 - T 100 -9.9 -4.68908 | opp_overlap 4323823, overlap 4323816 4323822 4323823 CGCACCCAAAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCATATGCGCCTAT TERM 4743 4323842 - 4323822 - T 100 -12.5 -3.95475 | opp_overlap 4323823, overlap 4323820 4323816 4323823 CACCCAAAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 4744 4323823 - 4323841 + T 100 -16 -4.8048 | opp_overlap 4323822 4323820 4323816 4323823 ACCCAAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 4745 4323841 - 4323823 - T 100 -16 -2.962 | opp_overlap 4323823, overlap 4323822 4323820 4323816 ACCCAAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC tnp 4324380 - 4323922 - | transposase for the IS1541 insertion element TERM 4746 4324511 - 4324493 - R 100 -16 -3.07307 | opp_overlap 4324493 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 4747 4324493 - 4324511 + r 100 -16 -4.36914 | opp_overlap 4324493 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 4748 4324552 - 4324531 - R 100 -10.2 -5.60993 | opp_overlap 4324533 CTGGGCACAAAAAAA CACTTGCC GAAAAG GGCAAGTG TCTAAAATTTTCAGG TERM 4749 4325219 - 4325233 + r 100 -12.8 -4.33248 | opp_overlap 4325219 TCAGGCGAAAAAAAA CCCCGC ATT GCGGGG TTTCTTCTGAAATTG TERM 4750 4325233 - 4325219 - R 100 -12.8 -5.78622 | opp_overlap 4325219 TCAGGCGAAAAAAAA CCCCGC ATT GCGGGG TTTCTTCTGAAATTG TERM 4751 4325365 - 4325392 + r 73 -7.2 -4.08706 | CTCTCGACCTATGTC CATGTAAATATT AATA AATATCTACATG TTTGTGTGGTGCGAA YPO3854 4327277 - 4325886 - | putative transport protein YifK TERM 4752 4326706 - 4326694 - G 89 -10.5 -4.41348 | CCCCCGGCAAAGAAA CCGCC ATG GGCGG TCAGGTTATCGAAGC wecG 4328541 - 4327801 - | putative UDP-N-acetyl-D-mannosaminuronic acid transferase TERM 4753 4327848 - 4327834 - G 76 -7.2 -4.4078 | overlap 4327839 ATAATAACCAACAAA CTTAAG CAG CTTAAG CTGACGACGAATGCG wecF 4329914 - 4328550 - | putative enterobacterial common antigen polymerase YPO3857 4330996 - 4329911 - | 4-alpha-L-fucosyltransferase TERM 4754 4330780 - 4330755 - G 82 -7.5 -4.64861 | gap 1, overlap 4330751 CCGTGCCAAAAGAAA CGCGCAC-TGCG ATC CGCCTGTGCACG GGCAATAACCGCCTC YPO3858 4332275 - 4331019 - | putative lipopolysaccharide biosynthesis protein TERM 4755 4332241 - 4332212 - G 83 -13.7 -3.20227 | overlap 4332210 GTTTAACCACCAATA GCCCTACGCCAAT CTTG ATTAGCGTAGAGC AGGCAGTCCAAATCG rffA 4333407 - 4332277 - | TDP-4-oxo-6-deoxy-D-glucose transaminase rffC 4334077 - 4333409 - | TDP-fucosamine acetyltransferase rffH 4335005 - 4334124 - | glucose-1-phosphate thymidylyltransferase TERM 4756 4334624 - 4334642 + g 82 -10.2 -3.93061 | opp_overlap 4334614 4334615 4334612 AAACAGTCGCGCCCT GCTGACGC GCG GCGACAGC TTTCAGTTTTGGACT TERM 4757 4335145 - 4335186 + r 77 -10.9 -2.74144 | opp_overlap 4335145, overlap 4335144 4335148 CCGATGATTAATCGA CTTTGGTGTCTCTCGTAGG TCGC CCAACGATAGACACTATAG ATTTCAAGGTGCAGG TERM 4758 4335148 - 4335183 + r 76 -11.2 -2.64803 | opp_overlap 4335145, overlap 4335145 4335144 ATGATTAATCGACTT TGGTGTCTCTCGTAGG TCGC CCAACGATAGACACTA TAGATTTCAAGGTGC rffG 4336367 - 4335300 - | dTDP-D-glucose-4,6-dehydratase wecC 4337626 - 4336364 - | UDP-N-acetyl-D-mannosamine dehydrogenase TERM 4759 4337579 - 4337565 - G 74 -7 -4.42238 | overlap 4337566 TTACGCGAAGCAAAA GCCGCC GCG GTCGGC AGACCAATATACCCA nfrC 4338753 - 4337623 - | UDP-N-acetylglucosamine 2-epimerase wzzE 4340095 - 4339034 - | lipopolysaccharide biosynthesis protein WzzE YPO3866 4341228 - 4340131 - | putative undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase TERM 4760 4341593 - 4341611 + r 100 -11.7 -4.23892 | opp_overlap 4341593 TCCAAAAGTAAAAAA CGCCACG ACTGG CGTGGCG TTTTGACTGATTCAA TERM 4761 4341611 - 4341593 - R 100 -11.7 -5.46698 | opp_overlap 4341593 TCCAAAAGTAAAAAA CGCCACG ACTGG CGTGGCG TTTTGACTGATTCAA rho 4343022 - 4341763 - | transcription termination factor Rho TERM 4762 4342434 - 4342416 - G 74 -6.8 -4.35461 | overlap 4342418 GCAATACCATCAAAA CACAATCA GGG TGATTGTA AGCAATGCTGGTCGC TERM 4763 4342719 - 4342697 - G 74 -6.9 -4.28369 | AACAATGCAAAATAA CGCTCGCCT TCTTT AGGCGGACG AATCTTACCGGCAAC fipA 4343828 - 4343502 - | thioredoxin 1 TERM 4764 4344636 - 4344626 - g 78 -2.4 -5.25803 | AACCGTTACAAAAAA CCGG TCA CCGC ATCAAAGAAGAGCTG TERM 4765 4344695 - 4344677 - g 86 -3 -5.59655 | opp_overlap 4344679, overlap 4344678 4344679 CAAATGAAGAAAAAA TGCGTCTG TTA CAGACGTT AATTGAAGAAGAATG TERM 4766 4344679 - 4344693 + G 70 -10 -3.33696 | opp_overlap 4344678 4344677 4344679 AATGAAGAAAAAATG CGTCTG TTA CAGACG TTAATTGAAGAAGAA rhlB 4343947 - 4345233 + | ATP-dependent RNA helicase RhlB TERM 4767 4346819 - 4346842 + T 84 -11.1 -3.69702 | overlap 4346822 GCCTTAATGCATGGC TAACGGGCA ATAGAC TGCCCGTTA TTATCTTCACTACTG TERM 4768 4346822 - 4346839 + T 77 -8.4 -3.97511 | overlap 4346819 TTAATGCATGGCTAA CGGGCA ATAGAC TGCCCG TTATTATCTTCACTA rep 4348920 - 4346899 - | ATP-dependent DNA helicase Rep TERM 4769 4346938 - 4346955 + g 100 -11.3 -4.66609 | opp_overlap 4346937 4346936 CTGAGCACGAAGATT GGCCAGA TGAC TCTGGCC TTTTTGCATACGCTC TERM 4770 4347054 - 4347038 - G 79 -7.9 -4.47328 | AACTCCATCAGAAAA CGGCTAG GTT CTGGCCG AATCAACTCGCCGTA TERM 4771 4348032 - 4348017 - G 78 -2.6 -5.26316 | opp_overlap 4348010 TCAGTTCAGAAAAAA GTTTCT TTTC AAAAAC ATGTGGGTTGTTGGC ppiC 4349124 - 4349405 + | peptidyl-prolyl cis-trans isomerase C TERM 4772 4349447 - 4349406 - f 71 -9.6 -3.06796 | gap 1, opp_overlap 4349407 4349409 4349414, overlap 4349414 TTGTACCGCAGCTAA TCCTGAAATACGCCACGCT ATAAA AG-GTGGCGTATTTCATGT TTATACTCGTCATAC TERM 4773 4349407 - 4349446 + F 100 -13.1 -4.00038 | gap 1, opp_overlap 4349406 4349414, overlap 4349409 4349414 TGTACCGCAGCTAAT CCTGAAATACGCCACGCT ATAAA AG-GTGGCGTATTTCATG TTTATACTCGTCATA TERM 4774 4349409 - 4349444 + F 100 -14.3 -3.58864 | gap 1, opp_overlap 4349406 4349414, overlap 4349407 4349414 TACCGCAGCTAATCC TGAAATACGCCACGCT ATAAA AG-GTGGCGTATTTCA TGTTTATACTCGTCA TERM 4775 4349439 - 4349414 - f 73 -8.4 -3.61268 | gap 1, opp_overlap 4349409 4349407 4349414, overlap 4349406 CAGCTAATCCTGAAA TACGCCACGCT ATAAA AG-GTGGCGTA TTTCATGTTTATACT TERM 4776 4349414 - 4349439 + F 77 -8.4 -4.05181 | gap 1, opp_overlap 4349414 4349406, overlap 4349409 4349407 CAGCTAATCCTGAAA TACGCCACGCT ATAAA AG-GTGGCGTA TTTCATGTTTATACT YPO3874 4349644 - 4350435 + | hypothetical protein TERM 4777 4351714 - 4351735 + G 77 -10.1 -3.74693 | TTTATTATCGAGTTC GGTGACCGC CTGA GCGATCACC TTTAATACGGTGGCA y1062 4350532 - 4351740 + | transposase for the IS285 insertion element YPO3876 4352290 - 4352063 - | hypothetical protein TERM 4778 4352201 - 4352184 - G 70 -2.7 -4.75356 | opp_overlap 4352184 4352187, overlap 4352187 AAATATATCGAAAAA TAATACC CAAG GGTATGA TTGGTAATGAAAATA TERM 4779 4352428 - 4352393 - H 100 -6.4 -6.06529 | gap 1, opp_overlap 4352403, overlap 4352395 TACACAGAAAAAAAA CATCAAAACACCTTTGA AAT TAAAAGGTATTTTGA-G ACGAATAATAAAAAC TERM 4780 4352427 - 4352395 - H 100 -10.1 -4.65669 | opp_overlap 4352403, overlap 4352393 CACAGAAAAAAAACA TCAAAACACCTTTGA AAT TAAAAGGTATTTTGA GACGAATAATAAAAA TERM 4781 4352469 - 4352523 + H 82 -10.2 -3.71794 | opp_overlap 4352478, overlap 4352478 GGAATATATATTCAC TCAATCAAATTCCCCATTCGGATTTT ATT AAAATCCGAATGGGGAATTAACTCCA TTTCAATGATTACAT TERM 4782 4352514 - 4352478 - H 100 -24.1 -3.93556 | opp_overlap 4352469 4352478 ATTCACTCAATCAAA TTCCCCATTCGGATTTT ATT AAAATCCGAATGGGGAA TTAACTCCATTTCAA TERM 4783 4352478 - 4352514 + H 100 -24.1 -3.11732 | opp_overlap 4352478, overlap 4352469 ATTCACTCAATCAAA TTCCCCATTCGGATTTT ATT AAAATCCGAATGGGGAA TTAACTCCATTTCAA YPO3877 4352550 - 4353080 + | putative fimbrial protein YPO3878 4353144 - 4353875 + | putative fimbrial chaperone YPO3879 4353903 - 4356530 + | putative outer membrane usher protein TERM 4784 4357295 - 4357276 - g 77 -10.7 -3.54129 | TATATCGCGTTTAAA GGGCCAG GAATTA CTGGCCC GATTGAGGGTACTGA TERM 4785 4357868 - 4357850 - g 71 -5.9 -4.33004 | AGTTAAGCAAAATAA GCGGGCA AACAG TGACCGC CGGAGCAGTGAATGC YPO3880 4356547 - 4357914 + | hypothetical protein TERM 4786 4358231 - 4358260 + G 70 -11.5 -2.6062 | gap 1, opp_overlap 4358234, overlap 4358230 4358227 4358234 CCGGTATTCCGGTTA CAACCTCAGGC-AC AGC GTAGCCTGCGGTTG ATCTTATCTGGTGGG YPO3881 4357952 - 4358698 + | putative chaperone protein YPO3882 4358722 - 4358880 + | hypothetical protein TERM 4787 4358917 - 4358896 - T 72 -9.5 -3.14564 | GCACCTGGGGATTAA TGAGCCTCA CCCC TGAGACTCA CCCTGCGGGCAGCAT TERM 4788 4359313 - 4359300 - T 78 -5.9 -4.81163 | opp_overlap 4359295 4359300, overlap 4359295 TAAATATTAACAAAA CCACC AGAA GGCGG TTTGGATTATATATT imm 4359590 - 4359333 - | colicin immunity protein YPO3884 4359843 - 4359592 - | colicin (partial) TERM 4789 4360074 - 4360046 - R 82 -3.2 -5.47964 | gap 1 ATAAAATAAGAAAAA CGCCCAA-CAATA CACT CATTGACTGGACG TTAACTGAAGCATAT YPO3885 4360359 - 4360096 - | hypothetical protein TERM 4790 4360181 - 4360191 + g 76 -6.8 -4.43909 | CCCTTTTCATCCTCA GCCA ACT TGGC TTCTTTTATTAGCCT YPO3886 4361882 - 4360359 - | colicin (partial) YPO3887 4362197 - 4361997 - | hypothetical protein TERM 4791 4362262 - 4362274 + r 75 -9.1 -3.58533 | TACCTAATATTCTTA CCCCA CCC TGGGG TTTCGGCAATTCTAC TERM 4792 4362346 - 4362324 - R 100 -9.8 -5.36441 | GGTGCACATAAAAAA GCCCCCCTTT TTT ACAGGGAGGC TCAATATAAAATCAC ilvC 4363856 - 4362378 - | ketol-acid reductoisomerase TERM 4793 4364090 - 4364065 - H 72 -9.9 -2.87529 | gap 1, opp_overlap 4364063, overlap 4364064 TGATATATTAACAAT GTGATATTGCAG TTT CTGCAATA-CAC CCGATTTCTTATGCA TERM 4794 4364250 - 4364282 + G 79 -7.6 -4.58395 | CTTTCCCGCCAGATC CAGCGGCTGGAAGA GACTA TCGGCCAGCCCCTG TTTTTACGCGATAAC TERM 4795 4364993 - 4364979 - g 100 -11.4 -5.08824 | opp_overlap 4364966 4364979 TGTGTACCGAAAAAA CGGCTC CAA GAGCCG TTGATTGATGCATTT TERM 4796 4364979 - 4364993 + G 77 -11.4 -3.41982 | opp_overlap 4364979, overlap 4364966 TGTGTACCGAAAAAA CGGCTC CAA GAGCCG TTGATTGATGCATTT ilvY 4364142 - 4365023 + | DNA-binding transcriptional regulator IlvY YPO3890 4365287 - 4365078 - | hypothetical protein TERM 4797 4365611 - 4365645 + H 70 -7.9 -3.64831 | opp_overlap 4365632, overlap 4365609 4365612 ATTTAGGCGGTGTTA ACCGGATAAGCGTGT CAATA ATAAGCTTATCCGGC TTATGTCATTATTAG TERM 4798 4365612 - 4365644 + H 81 -11.4 -2.78176 | opp_overlap 4365632, overlap 4365611 4365609 TTTAGGCGGTGTTAA CCGGATAAGCGTGT CAATA ATAAGCTTATCCGG CTTATGTCATTATTA YPO3891 4365899 - 4366090 + | hypothetical protein TERM 4799 4366122 - 4366109 - f 73 -5.3 -4.74453 | CAACACAGTTAAAAA CAGAT TTTA ATCTG CATAATATTTCAAGC YPO3892 4366162 - 4366854 + | hypothetical protein YPO3893 4366838 - 4367299 + | hypothetical protein YPO3894 4367358 - 4367840 + | hypothetical protein TERM 4800 4368090 - 4368066 - g 79 -9.4 -4.25056 | overlap 4368067 TATTTTAGTAAGAAA CTTCCCTTTC ACTGA GAAAGGGAAA ATAAACTGGTGGCTA TERM 4801 4368089 - 4368067 - g 71 -10.7 -3.14552 | overlap 4368066 ATTTTAGTAAGAAAC TTCCCTTTC ACTGA GAAAGGGAA AATAAACTGGTGGCT YPO3895 4367899 - 4368384 + | hypothetical protein ilvA 4370059 - 4368515 - | threonine dehydratase ilvD 4371915 - 4370065 - | dihydroxy-acid dehydratase ilvE 4373152 - 4372226 - | branched-chain amino acid aminotransferase TERM 4802 4372739 - 4372753 + g 70 -10 -3.28924 | opp_overlap 4372739 4372738 CACCATAGCATCAAT GCCTTG CTC CAAGGC TTCTGCACCCAGATA ilvM 4373432 - 4373175 - | acetolactate synthase 2 regulatory subunit ilvG 4375075 - 4373429 - | acetolactate synthase 2 catalytic subunit TERM 4803 4374050 - 4374076 + g 74 -11.6 -3.14132 | opp_overlap 4374046 GTGGTCATAACGCCA GTGATGTTGCTG TTT CAGCGCCATCAC TTCATCACGCCACGA TERM 4804 4375167 - 4375190 + H 100 -13.8 -3.69069 | opp_overlap 4375167 CGTGCCAATAAAAAA CCCCCGGACC TTTC GGTGCGGGGG TTCTCTTGAGATTAA TERM 4805 4375190 - 4375167 - H 100 -13.8 -5.4505 | opp_overlap 4375167 CGTGCCAATAAAAAA CCCCCGGACC TTTC GGTGCGGGGG TTCTCTTGAGATTAA YPO3902 4375698 - 4377221 + | putative magnesium chelatase family protein TERM 4806 4377241 - 4377226 - T 100 -11.8 -4.20516 | GCCTGATGTAACAAA GGGGGC CAAA GCCCCC TAATACTCAACTAAC YPO3903 4377816 - 4377478 - | hypothetical protein TERM 4807 4377646 - 4377632 - G 72 -10 -3.38046 | opp_overlap 4377630 4377632, overlap 4377630 TCGCCACGGCAAACA GCAACG AAC CGTTGC TCTTCTTCCGTTACT TERM 4808 4377632 - 4377646 + g 72 -10 -3.45087 | opp_overlap 4377632 4377630, overlap 4377630 TCGCCACGGCAAACA GCAACG AAC CGTTGC TCTTCTTCCGTTACT YPO3904 4377935 - 4378816 + | transcriptional regulator HdfR YPO3905 4379795 - 4378803 - | inner membrane ABC transporter permease protein YjfF YPO3906 4380814 - 4379795 - | putative sugar transport system permease YPO3907 4382316 - 4380826 - | putative sugar transport system ATP-binding protein TERM 4809 4382397 - 4382373 - R 87 -8.4 -4.4195 | overlap 4382376 ATACAGGTGATAAAA GCAGGCGGGG GCAAG CCCCGCCATC TGAATCAATAACCAA TERM 4810 4382394 - 4382376 - R 95 -13.1 -3.18044 | overlap 4382373 CAGGTGATAAAAGCA GGCGGGG GCAAG CCCCGCC ATCTGAATCAATAAC YPO3908 4383358 - 4382402 - | putative periplasmic protein precursor TERM 4811 4384229 - 4384213 - R 73 -3.8 -5.02201 | AAAATATTATAAAAA TCATTA AATTA TAATGA GGAAAGAGAAAGCGA TERM 4812 4384326 - 4384307 - R 100 -11.4 -5.80951 | opp_overlap 4384307 ACTTAAAATAAAAAA CCCCTCGC TTTC GCGAAGGG TTTTTTATCTGGCAG TERM 4813 4384307 - 4384326 + r 100 -9.2 -5.36441 | opp_overlap 4384307 ACTTAAAATAAAAAA CCCCTCGC TTTC GCGAAGGG TTTTTTATCTGGCAG TERM 4814 4384842 - 4384832 - R 74 -6.8 -4.27316 | opp_overlap 4384832 TCTCTCAATTCAAAA CACC TTC GGTG TTGTAAGGTTAAGCC TERM 4815 4385954 - 4385965 + r 74 -4.4 -5.06816 | CCACTTTCGTGTTTG CACA GTGC TGTG TTTTTATTAAACAGT TERM 4816 4386001 - 4386027 + r 70 -9.4 -2.75844 | opp_overlap 4385977 4385979, overlap 4386000 4386003 CCAGCTGGTATCTGC GACTGGCTTCAG CTC CAGGAGCTAGTC CTTTCACCTAACGCC TERM 4817 4386461 - 4386479 + r 82 -10.3 -3.57798 | overlap 4386454 CTTGGTCTTCCGGCG TGCGGGT TTTTC ACCCGCA TTATCGTTACTTATG TERM 4818 4387917 - 4387954 + r 78 -5.7 -4.7629 | opp_overlap 4387917 4387911 4387920, overlap 4387920 ATTGTTAAAGAGCAA TATCGTAAACACGACTT GGTA AAGTCATCTTTACGTTA TTTTTCAGTTCATAA TERM 4819 4387920 - 4387951 + r 78 -7.4 -4.47888 | opp_overlap 4387917 4387911 4387920, overlap 4387917 GTTAAAGAGCAATAT CGTAAACACGACTT GGTA AAGTCATCTTTACG TTATTTTTCAGTTCA murI 4391079 - 4390216 - | glutamate racemase TERM 4820 4390463 - 4390451 - GR 72 -7.7 -3.76775 | opp_overlap 4390450 4390447 GTTAATAGAGGGAAA TGGGT GCA ACCCA ATACTATAGTATCCG TERM 4821 4390927 - 4390953 + gr 100 -13.8 -3.14132 | opp_overlap 4390924 4390920 AGCATATATATAGTG GAGATCCGGCAA CAG TTGCCGAATCTC TTGATAGACAGACAG btuB 4392901 - 4391024 - | vitamin B12/cobalamin outer membrane transporter trmA 4393381 - 4394484 + | tRNA (uracil-5-)-methyltransferase TERM 4822 4394486 - 4394476 - T 76 -6.8 -4.57569 | GTACTGCTGGAAAAA CGTC ACT GACG AATAATTCATACCGC TERM 4823 4394532 - 4394514 - T 100 -10.3 -4.83243 | opp_overlap 4394514, overlap 4394523 CGCAGATAAAAGAAA GGGCAAC GACAT GTTGCCC TTAGTTGGCAAGACG TERM 4824 4394514 - 4394532 + T 81 -11 -3.33696 | opp_overlap 4394514 4394523 CGCAGATAAAAGAAA GGGCAACG ACA TGTTGCCC TTAGTTGGCAAGACG yijD 4395025 - 4394618 - | hypothetical protein YPO3913 4395685 - 4395038 - | DNA-binding transcriptional repressor FabR sthA 4395891 - 4397291 + | soluble pyridine nucleotide transhydrogenase oxyR 4398191 - 4397274 - | DNA-binding transcriptional regulator OxyR TERM 4825 4398773 - 4398756 - g 84 -4.2 -5.24129 | overlap 4398772 GCGTGGTAGAAAAAA TGTTTG TCGAGC CAAACA AACCGGGCGACCCGT TERM 4826 4398777 - 4398787 + G 70 -8.2 -3.65693 | opp_overlap 4398777 4398776 4398772 TCGAGCCAAACAAAC CGGG CGA CCCG TTTGAAGTATCTGAT YPO3916 4398338 - 4399069 + | putative peroxiredoxin/glutaredoxin family protein TERM 4827 4399123 - 4399140 + F 100 -11.3 -6.10295 | opp_overlap 4399121 AATAGGAAGTAACTT GGTAGGC TCCG GCCTACC TTTTTTTTCTGTTAG TERM 4828 4399689 - 4399707 + G 79 -7.4 -4.56597 | TTTAATTGGGACGAT CTGCCAGA ATC TGTGGCAG TTTTTGGCCCAGGCG YPO3917 4399164 - 4400627 + | dihydrolipoamide dehydrogenase TERM 4829 4400662 - 4400646 - T 89 -11.5 -3.53811 | opp_overlap 4400646 CTCAGGCGGTTCAAA CCGGGCA CGG CGCCCGG TTTTTAATCCCCCGT TERM 4830 4400646 - 4400662 + T 100 -10.8 -4.7254 | opp_overlap 4400646 CTCAGGCGGTTCAAA CCGGGC ACGGC GCCCGG TTTTTAATCCCCCGT YPO3918 4401546 - 4400743 - | hypothetical protein YPO3919 4402939 - 4401611 - | HlyD family secretion protein YPO3920 4404823 - 4403015 - | ABC transporter protein TERM 4831 4404958 - 4404982 + r 100 -13.7 -5.06414 | opp_overlap 4404953 4404956 GTGGTATCAATGACT CAGCCAGAAAG TTA TTTTCTGGCTG TTTTTCTTAAGCGGC YPO3922 4405606 - 4404989 - | hemophore HasA TERM 4832 4405733 - 4405766 + r 100 -18.3 -4.26351 | overlap 4405734 TAGCTGTGTTCTCTC ACCCGCATCATTGAC TGCC GTCAATGATGCGGGA TTTATTCACTTGCTG TERM 4833 4405734 - 4405765 + r 100 -21.8 -3.15087 | overlap 4405733 AGCTGTGTTCTCTCA CCCGCATCATTGAC TGCC GTCAATGATGCGGG ATTTATTCACTTGCT YPO3923 4408320 - 4405828 - | putative TonB dependent receptor protein TERM 4834 4406526 - 4406516 - G 71 -6.8 -4.25256 | CGGGTATCAAAATAA GCGA CCT TCGC GGCAAAGTGATCGTC TERM 4835 4408269 - 4408289 + g 70 -2 -4.92669 | opp_overlap 4408260, overlap 4408260 ATAATATACAAGTTG TAATTTTA TTCAC TGAAATTA TTGTTTTTTTATCTC TERM 4836 4408861 - 4408894 + r 76 -10.1 -3.33261 | opp_overlap 4408865 TAGTAACTGTTAATG CAAAGCGGGCCGCTG CAAT TAGCGGCCCGCCCCG TTCTCAAGATTAAAA TERM 4837 4408890 - 4408865 - R 100 -17.6 -3.75897 | opp_overlap 4408861 AACTGTTAATGCAAA GCGGGCCGCT GCAATT AGCGGCCCGC CCCGTTCTCAAGATT argH 4410292 - 4408919 - | argininosuccinate lyase TERM 4838 4408965 - 4408981 + g 70 -9.3 -3.5594 | opp_overlap 4408927 4408960 4408976, overlap 4408966 GCCGATGCAACCTGC TGCGGCG AAA CGCCGCC TTTGGCCACTCGCTT TERM 4839 4408966 - 4408980 + g 77 -12.8 -2.73243 | opp_overlap 4408927 4408960 4408976, overlap 4408965 CCGATGCAACCTGCT GCGGCG AAA CGCCGC CTTTGGCCACTCGCT TERM 4840 4409424 - 4409438 + g 90 -5.7 -5.24796 | overlap 4409417 4409415 TTACCACGGATGAGC TCCAG CGCAT CTGGA TTTTTCTTCTGTGGC argB 4411232 - 4410459 - | acetylglutamate kinase argC 4412405 - 4411401 - | N-acetyl-gamma-glutamyl-phosphate reductase argE 4412650 - 4413819 + | acetylornithine deacetylase ppc 4414193 - 4416829 + | phosphoenolpyruvate carboxylase TERM 4841 4417025 - 4417000 - f 100 -16.2 -2.52543 | AGTCGCCTCAACCGA GCAGGAGGGC TAGCCG GCCCTCCTGC ACCTGCGGCTTGCGC TERM 4842 4417092 - 4417120 + F 93 -11 -4.1899 | gap 1 CGGGCTGACGAGCCA GCGCGAT-GGGCA TCCC TGCCCAAGCGCGC TTTTCGCTGGCGTCC TERM 4843 4417235 - 4417202 - f 87 -5.5 -5.47399 | opp_overlap 4417202 TCAACGTCAAAAAAA CAATTCAAAACCC TCTTCTTT AGATTTTGAATTG GTCTTTGACCTTAAA TERM 4844 4417491 - 4417513 + F 75 -9 -3.59979 | CGATAGTGCGAAAGC GCGGGGTTCC AAG GGGGCCACGC TTTGCACTGAACCCC TERM 4845 4417520 - 4417566 + F 100 -15.4 -3.05384 | gap 1, opp_overlap 4417525, overlap 4417525 4417530 GGGCCACGCTTTGCA CTGAACC-CCAGATCTTGGAT CTTTTT ATCCATGATCTGGAGGTTCGG TTCAATGAAACACCC TERM 4846 4417525 - 4417561 + F 77 -10.3 -3.19192 | gap 1, opp_overlap 4417525, overlap 4417520 4417530 ACGCTTTGCACTGAA CC-CCAGATCTTGGAT CTTTTT ATCCATGATCTGGAGG TTCGGTTCAATGAAA TERM 4847 4417560 - 4417525 - f 93 -12.7 -3.05463 | opp_overlap 4417520 4417525 4417530 ACGCTTTGCACTGAA CCCCAGATCTTGGAT CTTTTT ATCCATGATCTGGAG GTTCGGTTCAATGAA TERM 4848 4417530 - 4417540 + F 75 -5.4 -4.88736 | opp_overlap 4417525, overlap 4417525 4417520 TTGCACTGAACCCCA GATC TTG GATC TTTTTATCCATGATC YPO3931 4417571 - 4418086 + | insertion element IS1661 DNA-binding protein TERM 4849 4418906 - 4418888 - g 71 -11 -2.73735 | overlap 4418878 4418876 4418899 AAACAGGCGGAATGA GTCCGGCA GAA TACCGGAC TCAGGTAGAAAAGCA YPO3932 4418140 - 4418925 + | transposase for insertion sequence IS1661 TERM 4850 4418982 - 4418960 - T 71 -9 -3.32844 | GGGTTCAGTGCATAA GCGTGGCCCC CTT GGAACCCCGC GCTTTCGCACTATCG YPO3934 4419711 - 4419280 - | hypothetical protein TERM 4851 4419698 - 4419722 + g 74 -7.9 -4.22524 | GAAACACGGTCACTA CGCGAGAAAAA CAA TTTTATTCGCG TTTCATTTTAACTAT YPO3935 4420178 - 4419714 - | hypothetical protein YPO3936 4420861 - 4420487 - | hypothetical protein TERM 4852 4421876 - 4421857 - g 72 -8.6 -3.90291 | gap 1, opp_overlap 4421874 ATCCGCCTAATTAAA GGCAGCCAC ATT GTGG-TGCC TCGGGTTCATAACCA TERM 4853 4422329 - 4422314 - g 71 -6.8 -4.2558 | gap 1 CAGCGTGGACTAAAA CCGGTGC CTT GC-CCGG TGGGGATATCGGCGG TERM 4854 4422669 - 4422655 - g 70 -4.2 -4.70659 | opp_overlap 4422658 GCGCACACTGAAAAA CAACAG GCG CTGCCG CTGGTTTCTTAATAG glpD 4421260 - 4422681 + | aerobic glycerol-3-phosphate dehydrogenase (partial) TERM 4855 4422799 - 4422770 - T 78 -5.8 -4.86939 | gap 2, opp_overlap 4422770 CAAGAAATTTAAAAA CCCTCTTCAATCGG ATAA CCG-C-GAAGAGGG TTTTTTACGGTGGCA TERM 4856 4422770 - 4422799 + T 73 -3.6 -5.0538 | gap 2, opp_overlap 4422770 CAAGAAATTTAAAAA CCCTCTTCAATCGG ATAA CCGC--GAAGAGGG TTTTTTACGGTGGCA glgP 4425291 - 4422844 - | glycogen phosphorylase TERM 4857 4423521 - 4423511 - G 72 -8.2 -3.84406 | opp_overlap 4423511 TTGGCATTATAATAA GCCG AGG CGGC TTTACCGGCAAAAAT TERM 4858 4423873 - 4423898 + g 100 -11.1 -4.63218 | opp_overlap 4423876, overlap 4423851 GTTGGCTAACCCCAA CCAGCGCCGTG GTGT CACGCCGTTGG TTTTATTGCAGAAAC glgA 4426890 - 4425460 - | glycogen synthase glgC 4428388 - 4426958 - | glucose-1-phosphate adenylyltransferase glgX 4430386 - 4428398 - | glycogen debranching enzyme TERM 4859 4428498 - 4428482 - G 74 -10.1 -3.63627 | GTCTGACACCCCAAA GGGAGGA ATC CCCTCCC ATTCCCCTTCAGGTA glgB 4432571 - 4430388 - | glycogen branching enzyme YPO3943 4433077 - 4434774 + | hypothetical protein TERM 4860 4434880 - 4434847 - T 75 -5.4 -4.90296 | opp_overlap 4434845 4434848 4434851, overlap 4434848 4434851 AAAACCCTATAAAAA TTAATGCCAGAG TATAACCCAC CTCTGGCATTAC TATTATTCCTGACAC TERM 4861 4434879 - 4434848 - T 73 -8.9 -3.52551 | opp_overlap 4434848 4434845 4434851, overlap 4434847 4434851 AAACCCTATAAAAAT TAATGCCAGAG TATAACCCAC CTCTGGCATTA CTATTATTCCTGACA YPO3944 4444023 - 4434982 - | putative invasin TERM 4862 4439941 - 4439920 - G 72 -8 -3.90112 | GTTGGCCGAACTAAA GACCACCG CAGCAC CGGTGATC GGGTTGCCGTTAGCA TERM 4863 4440808 - 4440787 - G 72 -8 -3.90112 | GTTGGCCGAACTAAA GACCACCG CAGCAC CGGTGATC GGGTTGCCGTTAGCA TERM 4864 4444940 - 4444924 - H 75 -3.1 -5.08824 | TCTTCACGCAAAAAA TAAAAAA CCA TTTTCTA TACGGCATTCAATTT TERM 4865 4445269 - 4445250 - H 100 -10 -5.63645 | opp_overlap 4445250 4445248 4445243 TTAAAATATAAAAAA CCCTGACC ATAA GATCAGGG TGCTTTGTTGTTCTT YPO3945 4445294 - 4445668 + | hypothetical protein YPO3946 4446046 - 4445759 - | hypothetical protein YPO3947 4446427 - 4446053 - | hypothetical protein YPO3948 4446949 - 4446668 - | hypothetical protein TERM 4866 4447076 - 4447059 - R 100 -9.8 -4.60949 | CATACGATAAACAAA GCCCGC ACTCTG GCGGGC TTACGGGTCTTCCAC asd 4448221 - 4447118 - | aspartate-semialdehyde dehydrogenase TERM 4867 4448595 - 4448611 + G 79 -5.1 -4.93968 | overlap 4448597 TGACTGAGATGATTG CAGCAAC TGT GTTGCTA TTTTTAATTATGGAT TERM 4868 4448597 - 4448609 + G 71 -7.7 -4.08682 | overlap 4448595 ACTGAGATGATTGCA GCAAC TGT GTTGC TATTTTTAATTATGG yhgN 4448588 - 4449172 + | putative eubacterial dITP- and XTP- hydrolyzing enzyme TERM 4869 4449257 - 4449243 - T 80 -2.8 -5.47399 | opp_overlap 4449243, overlap 4449256 TCAACGTCAAAAAAA CCAATT CAA AATGGG TCTTTGACTGCTGAC TERM 4870 4449389 - 4449402 + T 79 -8.1 -4.3534 | opp_overlap 4449383 TGTCAATAACCTCAA GCCTC TTCT GAGGC TTTTAATAATTAGAC YPO3951 4449816 - 4449412 - | hypothetical protein TERM 4871 4449439 - 4449449 + g 80 -3.2 -5.3671 | ATCATCAGGGTAAGC GGCT TTG AGTC TTTTTTGCTTGTCTT YPO3952 4450420 - 4450187 - | hypothetical protein YPO3953 4451105 - 4450602 - | putative gluconokinase gntM 4451322 - 4452638 + | putative gluconate permease gntR 4453725 - 4452730 - | gluconate utilization system Gnt-I transcriptional repressor TERM 4872 4453799 - 4453776 - R 82 -6 -4.93877 | gap 1, opp_overlap 4453776, overlap 4453771 TTCTAGCAAAGAAAA GGGTATAGCGC GAT GTGC-ATACCC TTTTTAGTTAACGTA TERM 4873 4453776 - 4453799 + r 100 -8.2 -4.87291 | gap 1, opp_overlap 4453776 4453771 TTCTAGCAAAGAAAA GGGTATAGCGC GAT GTGC-ATACCC TTTTTAGTTAACGTA YPO3956 4454549 - 4453854 - | hypothetical protein TERM 4874 4454790 - 4454774 - H 100 -9.4 -6.17292 | AAAGGCAAAAAAAAA GCCAGC ACCCG GCTGGC TAAGTAAACACTGGA YPO3957 4455044 - 4455313 + | hypothetical protein YPO3958 4455313 - 4456050 + | putative response regulator protein YPO3959 4457242 - 4456235 - | PfkB family carbohydrate kinase TERM 4875 4456767 - 4456750 - G 76 -12.7 -2.62933 | overlap 4456738 CAAGCTGCGACATCA GCGCCAG TAGT CTGGCGC TACGAGTACCGTACT YPO3960 4458112 - 4457252 - | hypothetical protein YPO3961 4458821 - 4458138 - | hypothetical protein YPO3962 4459840 - 4458896 - | sugar-binding transport protein YPO3963 4460863 - 4459871 - | sugar transport system permease protein TERM 4876 4460821 - 4460796 - G 77 -9.9 -3.72695 | opp_overlap 4460815, overlap 4460807 ACGGTTTGCAGTAAA TCGCTAAAAAA CGCT TTTTTCAGCGA GGCCGATTTTGCCAC TERM 4877 4460820 - 4460807 - G 78 -3.8 -5.07107 | opp_overlap 4460815, overlap 4460796 TAAATCGCTAAAAAA CGCT TTTTTC AGCG AGGCCGATTTTGCCA YPO3964 4462379 - 4460856 - | sugar transport ATP-binding protein TERM 4878 4462727 - 4462705 - g 71 -6.3 -4.37658 | gap 1 AAGCCGCTTACAAAA GCAG-GTCCA GGAG CGGACACTGC GCGATATGTCAAGCA YPO3965 4462568 - 4465123 + | putative hybrid two-component system regulatory protein YPO3966 4466455 - 4465259 - | hypothetical protein TERM 4879 4466154 - 4466166 + g 76 -3.3 -5.14563 | opp_overlap 4466155, overlap 4466155 GAATCATCACAAAAA AGCTG CCC CAGCG TTTTTTCATGCCAGG TERM 4880 4466165 - 4466155 - G 100 -6.8 -5.33785 | opp_overlap 4466154 4466155 AATCATCACAAAAAA GCTG CCC CAGC GTTTTTTCATGCCAG YPO3967 4466766 - 4468262 + | phosphate transport protein TERM 4881 4468358 - 4468378 + F 100 -10.4 -5.24129 | opp_overlap 4468358 GATGAGCAATAAAAA GGCGGCCT AAATC AGGTCGCC TTTTTTGTGCCCAGA TERM 4882 4468378 - 4468358 - f 100 -8.9 -5.15167 | opp_overlap 4468358 GATGAGCAATAAAAA GGCGGCCTA AAT CAGGTCGCC TTTTTTGTGCCCAGA TERM 4883 4468415 - 4468397 - f 100 -16 -4.36914 | opp_overlap 4468397 TTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC TERM 4884 4468397 - 4468415 + F 100 -16 -3.07307 | opp_overlap 4468397 TTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC tnp 4468528 - 4468986 + | transposase for the IS1541 insertion element TERM 4885 4469064 - 4469088 + T 100 -9.9 -4.43642 | opp_overlap 4469067, overlap 4469066 4469067 ATAGGCGCATATGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTAATTCTTTT TERM 4886 4469066 - 4469086 + T 100 -12.5 -3.78931 | opp_overlap 4469067, overlap 4469064 4469067 AGGCGCATATGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTAATTCTT TERM 4887 4469085 - 4469067 - T 100 -16 -4.8048 | opp_overlap 4469066 4469064 4469067 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTAATTCT TERM 4888 4469067 - 4469085 + T 100 -16 -2.85732 | opp_overlap 4469067, overlap 4469066 4469064 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTAATTCT uspB 4469454 - 4469119 - | universal stress protein UspB uspA 4470162 - 4470608 + | universal stress protein A TERM 4889 4470636 - 4470656 + F 100 -11.8 -4.91109 | opp_overlap 4470636 TTGAGTAACGTTAAA CGCTCGCC TCTCC GGCGGGCG TTTTTGTGATAGACG TERM 4890 4470656 - 4470636 - f 78 -9.6 -3.67976 | opp_overlap 4470636 TTGAGTAACGTTAAA CGCTCGCC TCTCC GGCGGGCG TTTTTGTGATAGACG TERM 4891 4471421 - 4471409 - g 74 -4.9 -4.77036 | TGGCATGATGAAAAA GTTAT CCA ATAAC ACCGCTTGCGTCTTT gdhA 4470855 - 4472198 + | glutamate dehydrogenase YPO3973 4472443 - 4473780 + | metalloprotease TERM 4892 4473855 - 4473840 - T 70 -6 -4.37092 | overlap 4473841 ATTCGGGTGAGAAAA TGCCGC TAAC GCGGCG GCGTCACCGATGAAG TERM 4893 4473854 - 4473841 - T 72 -9.5 -3.21934 | overlap 4473840 TTCGGGTGAGAAAAT GCCGC TAAC GCGGC GGCGTCACCGATGAA YPO3974 4474615 - 4473845 - | putative methyltransferase TERM 4894 4474579 - 4474562 - G 93 -14.1 -3.7319 | opp_overlap 4474562 AGCCAGAATAGATAA GGCGCCG GGAT CGGCGCC TGCTTCAGATAATAA TERM 4895 4474562 - 4474579 + g 82 -14.1 -2.74012 | opp_overlap 4474562 AGCCAGAATAGATAA GGCGCCG GGAT CGGCGCC TGCTTCAGATAATAA opdA 4476661 - 4474619 - | oligopeptidase A TERM 4896 4477511 - 4477501 - g 71 -5.4 -4.58773 | CGTATGAAATGAAAA CTGA TTA TCAG GATGTGGTGAAAGGT YPO3976 4476990 - 4477832 + | hypothetical protein TERM 4897 4478738 - 4478728 - g 70 -4.6 -4.7254 | overlap 4478714 4478729 4478730 AGCGGTTATCAAAAA CGCC GAT GGCA GCCTGACGCTGCAAT TERM 4898 4478964 - 4478976 + G 82 -10.5 -3.86524 | overlap 4478975 CCCCGGTTGCCGTTG CGGCG GGC CGCCG TTTGTCCGAACGTCT gor 4478018 - 4479370 + | glutathione reductase TERM 4899 4479380 - 4479417 + F 95 -11.3 -3.89524 | gap 1, opp_overlap 4479371, overlap 4479382 AGATGATTTCGTTAC TATGGCCCGAACAGGCAG AGA CT-CCTGCACGGGCCATG TTTCTGAAATACACT TERM 4900 4479382 - 4479415 + F 89 -11.7 -3.53733 | gap 1, opp_overlap 4479371, overlap 4479380 ATGATTTCGTTACTA TGGCCCGAACAGGCAG AGA CT-CCTGCACGGGCCA TGTTTCTGAAATACA TERM 4901 4479435 - 4479461 + F 75 -5.9 -4.70583 | opp_overlap 4479435 TCTGAAATACACTAA GCCAGGTTG AAAATGAGC TAACCTGGC TTTTATCTTAATAGA TERM 4902 4480250 - 4480265 + G 71 -6 -4.36262 | opp_overlap 4480244, overlap 4480249 TGCGCAAATTGTATG CGCTGC TACA GCCGCG TTTTAGTCTGAATAT YPO3978 4479562 - 4480689 + | putative regulatory protein YPO3979 4480867 - 4482135 + | GntP family permease glxK 4482146 - 4483282 + | putative glycerate kinase TERM 4903 4483418 - 4483387 - T 70 -7.2 -3.74872 | opp_overlap 4483385 4483414, overlap 4483389 AGGGACTTTATCAAA TACCGACGGTCAGA TATC TCTGGCCGTTGGGA CATCCTATTTTCCAC TERM 4904 4483416 - 4483389 - T 78 -9.8 -3.4582 | opp_overlap 4483385 4483414, overlap 4483387 GGACTTTATCAAATA CCGACGGTCAGA TATC TCTGGCCGTTGG GACATCCTATTTTCC YPO3981 4484034 - 4483528 - | hypothetical protein TERM 4905 4483822 - 4483832 + g 74 -2.6 -5.093 | opp_overlap 4483816 AACACCATATTTTTC TTTT AAA AAAA TTTTGTTATTTTCCC YPO3982 4484599 - 4484102 - | hypothetical protein TERM 4906 4484588 - 4484598 + g 82 -4 -5.24291 | TAAGATATTGTATTT TGTT TTT AACA TTTTATTTTCGTTTT YPO3983 4485470 - 4484601 - | hypothetical protein TERM 4907 4484942 - 4484976 + g 71 -5.3 -4.52589 | gap 1 TCATCATTCCTTTGT TATTGATAGG-ATAAT GACC ATTATTCCAATCAATA TTTTCTATCAAAGCA TERM 4908 4485545 - 4485521 - R 100 -12.1 -3.80625 | CCGTCATAACGCAAA GCGGCATCCAG TAA CAAGATGCCGC CCCAAATCATTATCA yapE 4488770 - 4485558 - | putative autotransporter protein TERM 4909 4486247 - 4486257 + g 79 -6.8 -4.63527 | opp_overlap 4486231, overlap 4486231 4486230 CGCCAGTCACTTGAG TGCC TGC GGCA TTTTTGGCCTGATAG TERM 4910 4487637 - 4487649 + g 73 -2.7 -5.0538 | GTTATTCCCTTTAGT TATCA CCG TGGTA TTTTTTACGATAGCG TERM 4911 4489554 - 4489538 - g 83 -5.1 -5.08011 | AAAACCGGCAAAAAA GCCATCT CTC ATATGGC CTGCCTCAGTGATCG TERM 4912 4490230 - 4490219 - g 85 -3.6 -5.4756 | AAGCCGAAGAAAAAA GCGC TGTT ACGC GGAGCCCTCATTGCC YPO3985 4489448 - 4490530 + | hypothetical protein TERM 4913 4491210 - 4491222 + G 76 -3.3 -5.1861 | TGGCAATAACCGCAC TACCC TCT GGGGA TTTTTTACTGCTGGC cdh 4490555 - 4491331 + | CDP-diacylglycerol pyrophosphatase YPO3987 4493530 - 4491308 - | hypothetical protein TERM 4914 4493106 - 4493088 - G 70 -9.6 -3.33151 | overlap 4493086 CGTTGCAAATGAATA TCTGGCTG CGT CAGCCAAA GGCGGGGGATACGAA TERM 4915 4493824 - 4493809 - R 80 -9 -3.98159 | CAGGAGAAGATGAAA GGCGAT CATT ATCGCC TTAGGGAGCGTTAGC YPO3988 4494665 - 4493835 - | EAL domain-containing protein YPO3989 4494899 - 4495099 + | putative tautomerase TERM 4916 4495172 - 4495154 - f 79 -3.2 -5.34555 | opp_overlap 4495155, overlap 4495147 4495155 TTACATCATAAAAAA TTTAAAAC ACC GTTTTAAT CCTATTGACTCTGGA kdgK 4495378 - 4496322 + | 2-dehydro-3-deoxygluconokinase TERM 4917 4496409 - 4496354 - T 86 -11.3 -3.38991 | gap 1, opp_overlap 4496362 4496408, overlap 4496352 AGGCCGCGAATAACA GACGTTAA-TGACCGATCGTTGCAGG ATAAA CCTACAGCCATCGGTCATTTTACGCC TGGCTAACGTGGCCT TERM 4918 4496362 - 4496400 + T 100 -12.5 -4.11692 | opp_overlap 4496354 4496352 AATAACAGACGTTAA TGACCGATCGTTGCAGG ATAAA CCTACAGCCATCGGTCA TTTTACGCCTGGCTA YPO3991 4497985 - 4496486 - | putative insulinase family protease TERM 4919 4496824 - 4496846 + g 86 -7 -5.05601 | TACGCGCATAGGTGG CGAACAACTT ACT GAGTTGGTCG TTTTTCTGTGTCATC TERM 4920 4497460 - 4497429 - G 74 -8.6 -4.00042 | opp_overlap 4497432, overlap 4497432 TGGCCGATTAAAGAA GAACCTTTGAGGCG ATAA CGCCACCACGGTTC CTGAATATTTTGTGG TERM 4921 4497762 - 4497750 - G 73 -9.1 -3.77464 | opp_overlap 4497749 4497743 4497741 AGACGAGGCAGTAAA TGGGC AAA GCCCA CTTCCTGTGTATTTT TERM 4922 4498307 - 4498277 - R 100 -17.7 -2.9294 | overlap 4498295 GACATTATGCAGAGA CGCTACCAGTGAC AGCAA GCCACTGGTAGCG AATTGAAGGGAGAAA dctA 4499639 - 4498350 - | C4-dicarboxylate transporter DctA TERM 4923 4500040 - 4500069 + r 76 -10.7 -2.71791 | opp_overlap 4500038 4500034, overlap 4500039 GGGATAGAACTTACA GGCTCCTGTGCAA TAAC TAGCACAGGAGCG GTTTACGGCAGCGAT YPO3993 4500573 - 4500094 - | hypothetical protein TERM 4924 4500211 - 4500235 + g 70 -2.8 -4.84017 | opp_overlap 4500220, overlap 4500212 ATATTTGGCGTTGAT AGGCGAAAAG GTCAA CTTTTCACCC TTTTTGTCCGCAGTT pelY 4502416 - 4500698 - | periplasmic pectate lyase precursor TERM 4925 4502613 - 4502590 - R 72 -9.5 -3.14344 | opp_overlap 4502590 4502603 4502608 GACTCGGCCCATCAA GGGGCCTCG CCTCTT CGAGGCCGC AGCAAGCAGCCTTCC YPO3995 4503366 - 4502662 - | hypothetical protein yhjK 4506192 - 4504006 - | biofilm formation regulator HmsP dppF 4508629 - 4507553 - | dipeptide transporter ATP-binding subunit dppD 4509606 - 4508626 - | dipeptide transporter ATP-binding subunit dppC 4510522 - 4509620 - | dipeptide transporter dppB 4511551 - 4510604 - | dipeptide transport system permease protein TERM 4926 4511575 - 4511600 + r 75 -8.9 -3.64487 | opp_overlap 4511575 4511574 CTCTCTGTGTAGAAT GCCGGGCTGCT CATA GGCAACCTGGC TTATTAAACCTCTCC TERM 4927 4511819 - 4511786 - R 73 -5.9 -4.50159 | overlap 4511788 TTTAACCTAAATAAA TAGACCGATGAACGT TGAT ACGCACACCGGTCCG GTATAAGGGTAAAAT TERM 4928 4511817 - 4511788 - R 88 -10.7 -3.8535 | overlap 4511786 TAACCTAAATAAATA GACCGATGAACGT TGAT ACGCACACCGGTC CGGTATAAGGGTAAA dppA 4513441 - 4511834 - | periplasmic dipeptide transport protein YPO4004 4514092 - 4513844 - | hypothetical protein YPO4005 4515873 - 4514110 - | putative hemolysin activator protein TERM 4929 4515946 - 4515925 - R 70 -3.7 -4.90918 | overlap 4515920 ACAAAATCAATAAAA GTTAGCCAC GAAA GCAACTAAC TTTAAATAAAAAATC YPO4006 4517373 - 4515982 - | hypothetical protein TERM 4930 4517675 - 4517656 - R 100 -13.6 -5.63504 | opp_overlap 4517656 AATGGCACAAAAAAA CCCTGACG TTAC CGTCAGGG TTCTTAAATTTGGTC TERM 4931 4517656 - 4517675 + r 100 -13.6 -3.78904 | opp_overlap 4517656 AATGGCACAAAAAAA CCCTGACG TTAC CGTCAGGG TTCTTAAATTTGGTC TERM 4932 4517853 - 4517817 - R 70 -8.1 -3.62775 | gap 1, opp_overlap 4517820, overlap 4517818 4517843 ATCACTTTTTAATAA CCTGCGGATGACTGCT GTTAAA AGCA-TCACCCGCAGT GAAAATGGCCGCCTT TERM 4933 4517852 - 4517818 - R 81 -11.6 -2.77344 | gap 1, opp_overlap 4517820, overlap 4517817 4517843 TCACTTTTTAATAAC CTGCGGATGACTGCT GTTAAA AGCA-TCACCCGCAG TGAAAATGGCCGCCT uhpC 4519210 - 4517879 - | regulatory protein UhpC TERM 4934 4518082 - 4518062 - G 71 -6.7 -4.21351 | opp_overlap 4518065 AAATAGCCCAACAAA GCCGGTTGC AGC GCCAGCGGC ATCCTTATGAGAGCA YPO4009 4520892 - 4520110 - | transposase/IS protein TERM 4935 4520808 - 4520822 + g 77 -11.4 -3.3506 | overlap 4520821 CTGCCTGTTGTGACA GCGCAG GCG CTGCGC TTATAAGGCTTTCCA y1093 4521911 - 4520889 - | transposase for insertion sequence IS100 TERM 4936 4521933 - 4521915 - R 100 -13.2 -4.01078 | AAAAGTGACCATAAA CTCTCCTG AAT CAGGAGAG CAGATTACCCCCTGG TERM 4937 4522377 - 4522362 - R 73 -8.2 -3.69338 | opp_overlap 4522366, overlap 4522353 4522365 AACCAACCCTAATAA GAGCGC CATT GCGCCC TGCCCACTGGCTATC uhpA 4523380 - 4522790 - | two-component system response regulator TERM 4938 4523489 - 4523461 - R 74 -4.6 -4.81551 | gap 1, overlap 4523462 4523463 GAGGCACATCAAAAA TTGGGCCAGACTT GGGT AAGCCTGGCC-AG TTACGGCTAAATTGC TERM 4939 4523488 - 4523463 - R 71 -9.7 -2.68202 | overlap 4523462 4523461 GGCACATCAAAAATT GGGCCAGACTT GGGT AAGCCTGGCCA GTTACGGCTAAATTG yhjW 4525187 - 4523496 - | phosphoethanolamine transferase TERM 4940 4525608 - 4525583 - R 100 -10.3 -4.46656 | overlap 4525584 4525585 GGCAGAAGAGTAAAA TGCCCGCGCCA GAGA TGGCGCGGGTC GAGCTCCCAAGGAAG TERM 4941 4525607 - 4525584 - R 100 -13.8 -3.27271 | overlap 4525583 4525585 GCAGAAGAGTAAAAT GCCCGCGCCA GAGA TGGCGCGGGT CGAGCTCCCAAGGAA TERM 4942 4525606 - 4525585 - R 100 -17.3 -2.5564 | overlap 4525584 4525583 CAGAAGAGTAAAATG CCCGCGCCA GAGA TGGCGCGGG TCGAGCTCCCAAGGA TERM 4943 4525689 - 4525700 + r 82 -5.8 -5.00616 | overlap 4525685 GTCGCGAGCACGTTG CCAG CAGC CTGG TTTTTTGCAGGCAAA YPO4014 4527179 - 4525716 - | hypothetical protein TERM 4944 4526969 - 4526986 + g 70 -2.1 -5.00895 | gap 1, overlap 4526969 4526970 TAATTCGGACTTCAT C-GAAAAT ATT ATTTTCAG TTTTTATGTAATCCG TERM 4945 4527098 - 4527118 + g 73 -9.1 -3.72324 | opp_overlap 4527097 GTGTATCGTAGATAC GTATTGCCA GTA TGGTAATAC TTATTACTACCAATA TERM 4946 4527635 - 4527598 - R 82 -4.9 -5.41143 | gap 1, overlap 4527602 4527603 CATGCTTGAAAAAAA TAAATCGGGCCGCTGATA CCC CATCAACCGCCCG-TTAA CATTTGTTCCCTTAC TERM 4947 4527632 - 4527602 - R 100 -8.2 -5.20328 | overlap 4527598 4527603 CTTGAAAAAAATAAA TCGGGCCGCTGATA CCC CATCAACCGCCCGT TAACATTTGTTCCCT TERM 4948 4527631 - 4527603 - R 90 -11.7 -3.7057 | overlap 4527602 4527598 TTGAAAAAAATAAAT CGGGCCGCTGATA CCC CATCAACCGCCCG TTAACATTTGTTCCC YPO4015 4529050 - 4527647 - | amino acid permease hutH 4531000 - 4529468 - | histidine ammonia-lyase hutU 4532688 - 4530997 - | urocanate hydratase TERM 4949 4532000 - 4531983 - G 71 -6.9 -4.20769 | opp_overlap 4531981 4531983 ACAGTGCAATAGAAA CCGCGAC ACCT GTAGCGG TATATTTCTCGATGC cysM 4533415 - 4534359 + | pyridoxal-phosphate dependent protein TERM 4950 4534890 - 4534873 - g 71 -7.1 -4.20696 | opp_overlap 4534875 GCATTAACGTTAAAA CACTAAT GAAA ATTAGTG TTAAACCTCATGGGG YPO4019 4534356 - 4534922 + | adenine phosphoribosyltransferase TERM 4951 4535920 - 4535903 - g 73 -2.7 -4.99043 | overlap 4535906 TCGGCATAAACAAAA TTATTGG GAAC CCAAAAA CAAAAGGGGCATAAC YPO4020 4535005 - 4535934 + | hypothetical protein TERM 4952 4536437 - 4536447 + G 91 -6.8 -5.17054 | opp_overlap 4536427 CAAGATAAGCAGAGT GCGT ATC ACGC TTTTTTGGCTATTCT TERM 4953 4536732 - 4536721 - g 76 -5.8 -4.72272 | opp_overlap 4536725, overlap 4536722 TCTGGGGATCAAAAA TGGC CCTA GCCA TGCGGAGGTGATGAT YPO4021 4535936 - 4537180 + | hypothetical protein YPO4022 4537703 - 4538656 + | putative iron transport protein YPO4023 4538666 - 4539625 + | putative iron transport permease TERM 4954 4539709 - 4539729 + G 83 -9.7 -4.25256 | overlap 4539706 TATTGCTACTGAGCA TCATCGCTC TCG GTGCGATGA TTATTTTCATGACAA YPO4024 4539615 - 4540622 + | putative iron transport permease YPO4025 4540619 - 4541377 + | putative iron ABC transporter, ATP-binding protein YPO4026 4541958 - 4541377 - | conserved hypothetical protein (partial) YPO4028 4543227 - 4543589 + | putative regulator TERM 4955 4544041 - 4544028 - f 75 -5.2 -4.76041 | overlap 4544030 CATAGTCAGGAAAAA CGCC GCGTCT GGCG AAAACGGCACCTTGC YPO4031 4544734 - 4544979 + | putative regulatory protein TERM 4956 4545040 - 4545058 + T 76 -6.7 -4.55287 | overlap 4545039 GGCTCTCACCACTTC GCCCTTG CCGTT TAAGGGC TTTTCTCTGGCTAGC YPO4032 4546554 - 4545247 - | hypothetical protein YPO4033 4547806 - 4546613 - | putative phage integrase YPO4034 4549385 - 4548192 - | putative AraC-family transcriptional regulatory protein TERM 4957 4549456 - 4549437 - R 82 -5.7 -4.91459 | opp_overlap 4549437 GAACAGGCAGAAAAA TCAGCGC GGTATG GCACTGA TTTTCCTATGGGATA YPO4035 4550659 - 4549475 - | sugar transport system permease protein TERM 4958 4550372 - 4550359 - G 72 -3.8 -4.84527 | overlap 4550360 GCCAGACATCAAAAA TGGC CGCTAT GCCA CCCAATAACCCCATC YPO4036 4552178 - 4550646 - | xylose transporter ATP-binding subunit TERM 4959 4551867 - 4551850 - G 80 -10.5 -3.727 | overlap 4551839 4551844 TCCATGATACCGAAA CGGCCCC ATTC GGAGCCG AGGAACATGTTCTCC xylF 4553381 - 4552386 - | D-xylose transporter subunit XylF TERM 4960 4553523 - 4553538 + H 70 -2.6 -4.95484 | overlap 4553525 GTTTAATGTTAATTT TATGAT AACG ATCATG TTTTCTTTCCTCATA TERM 4961 4553827 - 4553817 - H 74 -6.8 -4.2717 | opp_overlap 4553805 ACCAGCCCAGCAAAA GCAG GGC CTGC TTCCAAGGAGTATTG xylA 4553844 - 4555163 + | xylose isomerase TERM 4962 4555554 - 4555588 + G 76 -5.7 -4.59773 | gap 1, opp_overlap 4555542 4555550 AAACAACATCAGGTG CTGCGCCCCGCCATTT TATG GAATGACGGC-CGCAG TTTTTCCCAGTGCCA TERM 4963 4556270 - 4556245 - g 84 -4.6 -5.28176 | opp_overlap 4556245 CTGAGGTAGAAAAAA CCCCAATGGC TGCAAC GCCAGTGTGG TTCCTACCCTATCTT xylB 4555287 - 4556741 + | xylulose kinase TERM 4964 4556803 - 4556833 + T 100 -9.1 -4.82901 | opp_overlap 4556802 4556800 4556803, overlap 4556804 AGTGCGAATAAACAC CGTGCTGGGTAAT TCATT ATTACTCAGCACA TTTTTATAGGGCCAC TERM 4965 4556804 - 4556832 + T 100 -12.6 -3.49419 | opp_overlap 4556803 4556802 4556800, overlap 4556803 GTGCGAATAAACACC GTGCTGGGTAAT TCATT ATTACTCAGCAC ATTTTTATAGGGCCA YPO4040 4557845 - 4556859 - | hypothetical protein YPO4041 4558651 - 4557884 - | putative fimbrial chaperone TERM 4966 4558002 - 4557980 - G 70 -11.4 -2.69717 | overlap 4557979 4557975 ATCCATATAACCAAC GTTATAACGG CTA CCGCTATAAC CCGGCGTTTTAACAA TERM 4967 4559296 - 4559308 + r 74 -6.3 -4.5448 | CCAGTTGGTATTGAT TGAGT TGT ACTCA TTATTTTTATGGCTA TERM 4968 4561192 - 4561206 + r 93 -2.1 -6.34616 | TTGTTAATACTTTCA CCATT AGGAA GATGG TTTTTTTTCTTTTAG TERM 4969 4561264 - 4561297 + r 93 -11.9 -3.66497 | opp_overlap 4561265 4561268, overlap 4561256 4561265 4561268 4561273 CTTATGGCGATAATA TTAATTAGAGGGGAG TTAC CTCCCCTTTAATTAC TTTAAACATTTGTTA TERM 4970 4561265 - 4561296 + r 100 -15.4 -2.79175 | opp_overlap 4561265 4561268, overlap 4561264 4561256 4561268 4561273 TTATGGCGATAATAT TAATTAGAGGGGAG TTAC CTCCCCTTTAATTA CTTTAAACATTTGTT TERM 4971 4561296 - 4561265 - R 90 -13.2 -2.53271 | opp_overlap 4561265 4561264 4561256 4561268 4561273, overlap 4561268 TTATGGCGATAATAT TAATTAGAGGGGAG TTAC CTCCCCTTTAATTA CTTTAAACATTTGTT TERM 4972 4561268 - 4561293 + r 100 -12.7 -3.5332 | opp_overlap 4561265 4561268, overlap 4561265 4561264 4561256 4561273 TGGCGATAATATTAA TTAGAGGGGAG TTAC CTCCCCTTTAA TTACTTTAAACATTT TERM 4973 4561293 - 4561268 - R 80 -10.5 -3.41745 | opp_overlap 4561268 4561265 4561264 4561256 4561273, overlap 4561265 TGGCGATAATATTAA TTAGAGGGGAG TTAC CTCCCCTTTAA TTACTTTAAACATTT TERM 4974 4561273 - 4561288 + r 89 -10.4 -4.04394 | opp_overlap 4561268 4561265, overlap 4561268 4561265 4561264 4561256 ATAATATTAATTAGA GGGGAG TTAC CTCCCC TTTAATTACTTTAAA YPO4044 4561867 - 4561310 - | fimbrial protein TERM 4975 4562548 - 4562575 + r 75 -3.4 -5.24129 | opp_overlap 4562548 TTTAACACAATCCAA GCCACTGAGA ATAAACCC TCTCGGTAGC TTTTTTATAAACCAA TERM 4976 4562619 - 4562600 - R 85 -4.4 -5.50925 | opp_overlap 4562616 AACCAAGATAAAAAA TAACTTTA GCAT TAAAGTCA GTGTCGTATATTGGC YPO4045 4563741 - 4562749 - | hypothetical protein TERM 4977 4563320 - 4563330 + g 70 -8.2 -3.67976 | ATTGCCAGATAGCGG CCCG AAA CGGG TTTAACCTTAATAAG TERM 4978 4564104 - 4564048 - H 78 -10.3 -3.30159 | gap 1, opp_overlap 4564053 4564058 4564063, overlap 4564049 4564058 CCAATGGGGCCATAA GTGCACTGAACC-CCAGATCTTGGAT CTTTTT ATCCATGATCTGGAGGTTCGGTTCAA TGAAACACCCTTTTT TERM 4979 4564103 - 4564049 - H 95 -13.8 -2.57881 | gap 1, opp_overlap 4564053 4564058 4564063, overlap 4564048 4564058 CAATGGGGCCATAAG TGCACTGAACC-CCAGATCTTGGAT CTTTTT ATCCATGATCTGGAGGTTCGGTTCA ATGAAACACCCTTTT TERM 4980 4564053 - 4564099 + H 100 -15.4 -3.05384 | gap 1, opp_overlap 4564049 4564048 4564058, overlap 4564058 4564063 GGGGCCATAAGTGCA CTGAACC-CCAGATCTTGGAT CTTTTT ATCCATGATCTGGAGGTTCGG TTCAATGAAACACCC TERM 4981 4564058 - 4564094 + H 77 -10.3 -3.19192 | gap 1, opp_overlap 4564049 4564048 4564058, overlap 4564053 4564063 CATAAGTGCACTGAA CC-CCAGATCTTGGAT CTTTTT ATCCATGATCTGGAGG TTCGGTTCAATGAAA TERM 4982 4564093 - 4564058 - H 93 -12.7 -3.08471 | opp_overlap 4564058 4564053 4564063, overlap 4564049 4564048 CATAAGTGCACTGAA CCCCAGATCTTGGAT CTTTTT ATCCATGATCTGGAG GTTCGGTTCAATGAA TERM 4983 4564063 - 4564073 + H 75 -5.4 -4.88736 | opp_overlap 4564058 4564049 4564048, overlap 4564058 4564053 GTGCACTGAACCCCA GATC TTG GATC TTTTTATCCATGATC YPO4046 4564104 - 4564619 + | insertion element IS1661 DNA-binding protein TERM 4984 4565439 - 4565421 - g 71 -11 -2.73735 | overlap 4565411 4565409 4565432 AAACAGGCGGAATGA GTCCGGCA GAA TACCGGAC TCAGGTAGAAAAGCA YPO4047 4564673 - 4565458 + | transposase for insertion sequence IS1661 TERM 4985 4565515 - 4565493 - f 71 -9 -3.32844 | GGGTTCAGTGCATAA GCGTGGCCCC CTT GGAACCCCGC GCTTTCGCACTATCG cmr 4565931 - 4567160 + | multidrug translocase TERM 4986 4567165 - 4567208 + F 73 -7.4 -4.08394 | overlap 4567168 CTACCGAGTAAGTTT ATTCCCTGCTGGAGGAGC GTCAGGTA GCTTCTCCAGCAGGATAG TTTTACCCACGCTAT TERM 4987 4567168 - 4567205 + F 100 -13.5 -3.08032 | overlap 4567165 CCGAGTAAGTTTATT CCCTGCTGGAGGAGC GTCAGGTA GCTTCTCCAGCAGGA TAGTTTTACCCACGC YPO4049 4567870 - 4568451 + | hypothetical protein TERM 4988 4568480 - 4568453 - T 78 -9.2 -3.62235 | opp_overlap 4568459, overlap 4568451 4568456 ATGAAAGAAAATAGA CAGCAAGGAGGA TCAT TCCTCCTTATTG GAAAGATATCTATAT TERM 4989 4568459 - 4568474 + T 75 -9 -3.62224 | opp_overlap 4568456 4568453 4568451 GAAAATAGACAGCAA GGAGGA TCAT TCCTCC TTATTGGAAAGATAT YPO4050 4568797 - 4568465 - | hypothetical protein TERM 4990 4569275 - 4569287 + G 86 -6.3 -5.18726 | GTTGTACCGGGCACC TTGAG GGA CTCAA TTTTTATTCTGGAGG tnpA 4569065 - 4569550 + | transposase (partial) TERM 4991 4571101 - 4571077 - T 71 -8.5 -3.51934 | opp_overlap 4571077, overlap 4571075 CCGCCGTGACAAACA GACTGATCTGC TCC GCTGACCAGCC TTGTGCCACCAACTC selA 4572895 - 4571507 - | selenocysteine synthase fdhE 4574008 - 4573079 - | formate dehydrogenase accessory protein FdhE TERM 4992 4573954 - 4573927 - G 74 -7.6 -4.12942 | opp_overlap 4573919 4573928 4573931, overlap 4573931 TTAAATTTGCGAAAA GTAACGGCGGGA TATT CCCCGCCGTTGT ACCTTTTTCGCGTTG TERM 4993 4573928 - 4573953 + g 77 -12.6 -2.85019 | opp_overlap 4573927 4573931, overlap 4573919 4573931 TAAATTTGCGAAAAG TAACGGCGGG ATATTC CCCGCCGTTG TACCTTTTTCGCGTT TERM 4994 4573950 - 4573931 - G 85 -12.8 -3.67175 | opp_overlap 4573928 4573919 4573931, overlap 4573927 ATTTGCGAAAAGTAA CGGCGGGA TATT CCCCGCCG TTGTACCTTTTTCGC TERM 4995 4573931 - 4573950 + g 82 -12.1 -3.5616 | opp_overlap 4573931 4573927, overlap 4573928 4573919 ATTTGCGAAAAGTAA CGGCGGG ATATTC CCCGCCG TTGTACCTTTTTCGC fdoI 4574682 - 4574008 - | formate dehydrogenase-O subunit gamma TERM 4996 4574527 - 4574482 - G 74 -4.7 -4.81734 | gap 2, overlap 4574483 4574493 4574496 AAACATGATCAAAAA GGCCGCGAACATCACCACCCC GGCAAA GGGGTGAAGA-ATGCGCG-CC ATCTGTGGTGTACCA TERM 4997 4574638 - 4574667 + g 100 -7 -5.77571 | overlap 4574639 TATCCAGTGGTTAAT GCGCTCCGGCGC GCTGTA GCGCTGGATCGG TTTTTCTTTTTTCAT TERM 4998 4574639 - 4574666 + g 84 -10.5 -4.02882 | overlap 4574638 ATCCAGTGGTTAATG CGCTCCGGCGC GCTGTA GCGCTGGATCG GTTTTTCTTTTTTCA fdoH 4575650 - 4574679 - | formate dehydrogenase-O, iron-sulfur subunit TERM 4999 4574994 - 4575015 + g 76 -11.6 -3.28712 | opp_overlap 4575009, overlap 4575009 4575009 GGTACCGCCGACGCC CGCAGGGT CATATA ACCCTGCG TTATCAAACCCACGG TERM 5000 4576988 - 4577006 + H 71 -3 -4.96501 | overlap 4576989 4576990 4576992 CCAAGAATTTCAGCT TCGACAGC GCC GCTGTCAC TTTGTTTTTATCCGG TERM 5001 4576990 - 4577004 + H 71 -10 -2.73005 | overlap 4576989 4576988 4576992 AAGAATTTCAGCTTC GACAGC GCC GCTGTC ACTTTGTTTTTATCC TERM 5002 4579418 - 4579381 - g 79 -9.1 -4.18018 | opp_overlap 4579415 4579416, overlap 4579383 CTTGCCCAGCTAAAA CAGGTACAACCGGTCGG TCAA CTCACCGGCTGTACCCA TGCTGCCGCGTGGAT TERM 5003 4579416 - 4579383 - g 85 -11.7 -3.69216 | opp_overlap 4579415, overlap 4579381 TGCCCAGCTAAAACA GGTACAACCGGTCGG TCAA CTCACCGGCTGTACC CATGCTGCCGCGTGG fdhD 4578907 - 4579731 + | formate dehydrogenase accessory protein TERM 5004 4579789 - 4579767 - f 78 -4.2 -5.22312 | ATCCACACCAAAAAA TATCATTGAT GAC ACCAAAGATA TAACGATAGTGGCGA TERM 5005 4579988 - 4579969 - f 71 -4.9 -4.7416 | overlap 4579972 GTAAAACGTCAAAAA GAAGCGG GTTACG CCGCATC ATAAATTAATTTTAT TERM 5006 4579985 - 4579972 - f 70 -5.2 -4.45259 | overlap 4579969 AAACGTCAAAAAGAA GCGG GTTACG CCGC ATCATAAATTAATTT sodA 4580167 - 4580790 + | superoxide dismutase TERM 5007 4580825 - 4580808 - f 70 -5.5 -4.42386 | opp_overlap 4580808 CGCTTATCCATAAAA CGGGC CTTAAACC GCCCG TTGCATAGCCAAAGA TERM 5008 4580908 - 4580876 - f 76 -9.2 -3.50722 | opp_overlap 4580880, overlap 4580874 4580878 4580880 TTCAAGTACGAAAGA TACATGCCAGCAAG GCCCT CTTGCTGGCATTTT TATTGTTAAAGTTTC TERM 5009 4580906 - 4580878 - f 89 -11.8 -3.32233 | opp_overlap 4580880, overlap 4580876 4580874 4580880 CAAGTACGAAAGATA CATGCCAGCAAG GCCCT CTTGCTGGCATT TTTATTGTTAAAGTT TERM 5010 4580904 - 4580880 - f 100 -14.4 -3.21671 | opp_overlap 4580880, overlap 4580878 4580876 4580874 AGTACGAAAGATACA TGCCAGCAAG GCCCT CTTGCTGGCA TTTTTATTGTTAAAG TERM 5011 4580880 - 4580904 + F 100 -15.1 -5.29445 | opp_overlap 4580880 4580878 4580876 4580874 AGTACGAAAGATACA TGCCAGCAAGG CCC TCTTGCTGGCA TTTTTATTGTTAAAG cheM 4581134 - 4583083 + | methyl-accepting chemotaxis protein II TERM 5012 4583511 - 4583501 - g 100 -5.4 -6.15717 | GAAATAGAAAAAAAA GTGA ATG TCAC GTGTAGCAAAGCACG TERM 5013 4583553 - 4583543 - g 74 -2.6 -5.06816 | AGTTTGCAAGAAAAA TTAA GCG TTAA ATACAAAAAAAGACA YPO4063 4583273 - 4583605 + | hypothetical protein YPO4064 4584161 - 4584613 + | hypothetical protein TERM 5014 4584763 - 4584736 - T 80 -10.5 -3.56375 | overlap 4584734 4584731 4584727 4584738 GCAAAAGGAACAACA CACCGGGTGGC GGCCAT GCCACCCAGAG GTTACCGCAAAGCGG TERM 5015 4584761 - 4584738 - T 86 -11.7 -3.33839 | overlap 4584736 4584734 4584731 4584727 AAAAGGAACAACACA CCGGGTGGC GGCCAT GCCACCCAG AGGTTACCGCAAAGC TERM 5016 4584778 - 4584790 + T 71 -3.3 -5.0538 | opp_overlap 4584788 GGTTACCGCAAAGCG GCGAT CAA AACGC TTTTTTAGCGTAGCC YPO4065 4585138 - 4584782 - | hypothetical protein TERM 5017 4584957 - 4584968 + g 70 -2.2 -5.03715 | GCCAGTTTTTGAGCT TCTG CACT CAGG TTTTTTACCCGTACT TERM 5018 4584989 - 4585012 + g 82 -7.4 -4.66456 | gap 1, overlap 4584987 4584991 TACCCGTACTTCTTT CAGGC-GCTGA ATT TCAGCGGCCAG TTTCTCTTTTTCTTT mtlR 4585941 - 4585387 - | mannitol repressor protein TERM 5019 4586122 - 4586085 - R 73 -9.1 -3.54424 | overlap 4586086 4586088 CTTTAGTGTCTTAAA TCATTGGCCCGCTATCG TTTC CGTTATCAGGCCAATGG GACATAGCTGGCTTA TERM 5020 4586121 - 4586086 - R 88 -12.6 -2.72511 | overlap 4586085 4586088 TTTAGTGTCTTAAAT CATTGGCCCGCTATCG TTTC CGTTATCAGGCCAATG GGACATAGCTGGCTT TERM 5021 4586119 - 4586088 - R 71 -9.4 -2.90813 | overlap 4586086 4586085 TAGTGTCTTAAATCA TTGGCCCGCTATCG TTTC CGTTATCAGGCCAA TGGGACATAGCTGGC mtlD 4587311 - 4586148 - | mannitol-1-phosphate 5-dehydrogenase mtlA 4589379 - 4587448 - | PTS system, mannitol-specific IIABC component TERM 5022 4589416 - 4589384 - R 71 -4.2 -4.89567 | GGTGAAAACATAAAA CACCCCTATTGGTA CGCGC TAACAATAAGAGCG CGATATAATTATTTT TERM 5023 4589549 - 4589537 - R 72 -6.3 -4.26903 | CGTAGCTCACGAAAA TTTCG TGA CGAAA GTCACACAAAACAAC TERM 5024 4589828 - 4589809 - R 100 -11.4 -4.44914 | opp_overlap 4589807 TATGTAAGAAAATAA CAGGGACC AAAA GGCCCCTG AGGTTATTGACAAAG TERM 5025 4589904 - 4589930 + r 72 -10.1 -2.88849 | gap 1, opp_overlap 4589893, overlap 4589899 4589905 ACATCCATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCTCTGCC TERM 5026 4589905 - 4589931 + r 84 -10.1 -3.82218 | gap 1, opp_overlap 4589893, overlap 4589899 4589904 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCTCTGCCT yiaF 4590754 - 4590029 - | hypothetical protein TERM 5027 4591013 - 4590974 - R 85 -7.3 -4.87786 | gap 1, opp_overlap 4590978 4590979, overlap 4590976 4590979 4590984 CTAACCCCACAAAAA CATAACGT-AAGGGGAGC GTATA GCTCCCCTTGAGGTTATT GACAAAGTGCCCGCG TERM 5028 4591011 - 4590976 - R 86 -9.9 -4.05669 | gap 1, opp_overlap 4590978 4590979, overlap 4590974 4590979 4590984 AACCCCACAAAAACA TAACGT-AAGGGGAGC GTATA GCTCCCCTTGAGGTTA TTGACAAAGTGCCCG TERM 5029 4591007 - 4590979 - R 83 -8.8 -4.13816 | opp_overlap 4590978 4590979, overlap 4590976 4590974 4590984 CCCACAAAAACATAA CGTAAGGGGAGC GTATA GCTCCCCTTGAG GTTATTGACAAAGTG TERM 5030 4590979 - 4591007 + r 77 -11 -2.77013 | opp_overlap 4590979 4590976 4590974 4590984, overlap 4590978 CCCACAAAAACATAA CGTAAGGGGAGC GTATA GCTCCCCTTGAG GTTATTGACAAAGTG TERM 5031 4591002 - 4590984 - R 86 -11.7 -3.33845 | opp_overlap 4590979 4590978, overlap 4590979 4590976 4590974 AAAAACATAACGTAA GGGGAGC GTATA GCTCCCC TTGAGGTTATTGACA TERM 5032 4591081 - 4591107 + r 72 -10.1 -2.88849 | gap 1, opp_overlap 4591070, overlap 4591076 4591080 ACATCCATGTAGGCT CGAACCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCTCTGCC TERM 5033 4591172 - 4591190 + r 90 -11.7 -3.61398 | TGTCAGCAGTCTGAA GGGGAGC GTATA GCTCCCC TTATTGCCCAGCACG glyS 4593290 - 4591221 - | glycyl-tRNA synthetase subunit beta TERM 5034 4591653 - 4591615 - G 74 -7.6 -4.25283 | gap 2, opp_overlap 4591614 ACTCGCGCATCAAAA TCAGCCGGT-TTGG-TCG GACGA CGAGCCAAGACCGCCTGA ATGGTATCGACGCTA glyQ 4594214 - 4593300 - | glycyl-tRNA synthetase subunit alpha TERM 5035 4594717 - 4594704 - g 70 -2.3 -5.00884 | overlap 4594690 ACCGTGCTCAAAAAA CGGGA GCAT TACCG CAAAAGCTTCCATCA tag 4594542 - 4595114 + | DNA-3-methyladenine glycosylase YPO4075 4595111 - 4595566 + | hypothetical protein yiaD 4595924 - 4596583 + | putative outer membrane lipoprotein TERM 5036 4596669 - 4596641 - T 72 -7.6 -3.80133 | gap 2, opp_overlap 4596644, overlap 4596639 CACCGTGATAAAACA TGCGGATAATGTCC TTT GG-C-TTATCCGCA CTGCTCCCCATTTTC YPO4077 4597358 - 4596714 - | hypothetical protein YPO4078 4597877 - 4598857 + | putative D-isomer specific 2-hydroxyacid dehydrogenase TERM 5037 4598878 - 4598911 + F 76 -9.7 -3.35597 | overlap 4598876 CATCCGCCCGTCAAT TCTATTGGCCTGC CCTGTTTA GCGGGTCAATAGA TGTTTGGCAGGTCAA TERM 5038 4599085 - 4599051 - f 71 -4.2 -4.82901 | TCCTCCCTACAAAAA CCGCTCAGGGATGA GGCTATT TCTTCGCCAAGCGG CACACTGAATCTGCC malS 4599146 - 4601209 + | periplasmic alpha-amylase precursor YPO4081 4601624 - 4602067 + | hypothetical protein TERM 5039 4602357 - 4602367 + F 91 -5.4 -5.59502 | AATTCTCTCCTCTTG CCAT TTC ATGG TTTTTTACTTTTTTA avtA 4602522 - 4603787 + | valine--pyruvate transaminase TERM 5040 4603872 - 4603848 - T 100 -12.9 -4.23674 | opp_overlap 4603846 4603845 CTTCACCAATACAAA CAGGGCAGC CAATTAC GCTGCCCTG AAGTTTAATAGCCCG yidE 4605558 - 4603900 - | hypothetical protein TERM 5041 4605765 - 4605734 - R 100 -10.2 -4.41548 | overlap 4605736 GGATACGCCACAAAA TGCACCGGAGAG CGGGGAAT CTCTCCGGTGAA AAGACAAACAAGGGA TERM 5042 4605763 - 4605736 - R 90 -12.8 -2.54186 | overlap 4605734 ATACGCCACAAAATG CACCGGAGAG CGGGGAAT CTCTCCGGTG AAAAGACAAACAAGG ibpB 4606395 - 4605931 - | heat shock chaperone IbpB ibpA 4607089 - 4606676 - | heat shock protein IbpA TERM 5043 4607265 - 4607253 - H 77 -3.5 -5.23316 | opp_overlap 4607253 CATGAGATCAAAAAA TTTTT CGC AAAAA ATCGTATTGGAAAAT TERM 5044 4607606 - 4607571 - g 71 -10.6 -3.05596 | gap 1, overlap 4607576 TACTCTGGCACCGAA GCCAATATCGCCATGCT CAA AG-ATGACGATACCGGC TGGGCACTACGCCCC YPO4086 4607457 - 4607795 + | hypothetical protein TERM 5045 4608420 - 4608433 + F 78 -2.3 -5.43866 | AGGTAAGCTGCTGTT CCGGT AAGA AACGG TTTTTTTGCGCATTC YPO4089 4608658 - 4609620 + | hypothetical protein YPO4090 4609614 - 4610567 + | ornithine cyclodeaminase TERM 5046 4610774 - 4610718 - f 78 -10.3 -3.30159 | gap 1, opp_overlap 4610723 4610728 4610733, overlap 4610719 4610728 CCAAGGGGGCCATAA GTGCACTGAACC-CCAGATCTTGGAT CTTTTT ATCCATGATCTGGAGGTTCGGTTCAA TGAAACACCCTTTTT TERM 5047 4610773 - 4610719 - f 95 -13.8 -2.57881 | gap 1, opp_overlap 4610723 4610728 4610733, overlap 4610718 4610728 CAAGGGGGCCATAAG TGCACTGAACC-CCAGATCTTGGAT CTTTTT ATCCATGATCTGGAGGTTCGGTTCA ATGAAACACCCTTTT TERM 5048 4610723 - 4610769 + F 100 -15.4 -3.05384 | gap 1, opp_overlap 4610719 4610718 4610728, overlap 4610728 4610733 GGGGCCATAAGTGCA CTGAACC-CCAGATCTTGGAT CTTTTT ATCCATGATCTGGAGGTTCGG TTCAATGAAACACCC TERM 5049 4610763 - 4610728 - f 93 -12.7 -3.08471 | opp_overlap 4610728 4610723 4610733, overlap 4610719 4610718 CATAAGTGCACTGAA CCCCAGATCTTGGAT CTTTTT ATCCATGATCTGGAG GTTCGGTTCAATGAA TERM 5050 4610728 - 4610764 + F 77 -10.3 -3.19192 | gap 1, opp_overlap 4610719 4610718 4610728, overlap 4610723 4610733 CATAAGTGCACTGAA CC-CCAGATCTTGGAT CTTTTT ATCCATGATCTGGAGG TTCGGTTCAATGAAA TERM 5051 4610733 - 4610743 + F 75 -5.4 -4.88736 | opp_overlap 4610728 4610719 4610718, overlap 4610728 4610723 GTGCACTGAACCCCA GATC TTG GATC TTTTTATCCATGATC YPO4091 4610774 - 4611289 + | insertion element IS1661 DNA-binding protein TERM 5052 4612109 - 4612091 - g 71 -11 -2.73735 | overlap 4612081 4612079 4612102 AAACAGGCGGAATGA GTCCGGCA GAA TACCGGAC TCAGGTAGAAAAGCA YPO4092 4611343 - 4612128 + | transposase for insertion sequence IS1661 TERM 5053 4612184 - 4612162 - T 75 -9 -3.59979 | GGGGTTCAGTGCAAA GCGTGGCCCC CTT GGAACCCCGC GCTTTCGCACTATCG YPO4093 4613328 - 4612519 - | sugar phosphatase TERM 5054 4613507 - 4613480 - R 93 -4.1 -5.81412 | gap 1 TTCAGGCAAAAAAAA GCCCAGTGGCAG TTTTC CCACC-CTGGAC TTTTTTATCTGGCCA gyrB 4615958 - 4613544 - | DNA gyrase subunit B recF 4617063 - 4615978 - | recombination protein F TERM 5055 4616293 - 4616304 + g 71 -7.2 -4.03234 | ACCATCGGCCCGAAT GCGG AAAT CCGC TTTATGTGGCCCAAC TERM 5056 4616566 - 4616584 + g 74 -12.4 -2.7556 | opp_overlap 4616563, overlap 4616568 ATAGCGACTAACCTG GCGCAGCG CGG CGTTGCGC TGCTTGAGTAACCTT TERM 5057 4616568 - 4616587 + g 74 -11.4 -3.10082 | opp_overlap 4616563, overlap 4616566 AGCGACTAACCTGGC GCAGCGCG GCGT TGCGCTGC TTGAGTAACCTTTTT TERM 5058 4616684 - 4616663 - G 76 -4.3 -5.0538 | opp_overlap 4616662 CCCCAGTCTAAAAAA GCGCGCC GGAATTTT GGCCCGC CATTTAATAACGTAA dnaN 4618336 - 4617236 - | DNA polymerase III subunit beta dnaA 4619729 - 4618341 - | chromosomal replication initiation protein YPO4098 4619853 - 4620062 + | hypothetical protein TERM 5059 4620397 - 4620411 + F 75 -7.2 -4.29139 | AGCAGCCAAACGCGT TTACTG AAT CAGTAA TTATTTTAAGTTTAG rpmH 4620439 - 4620579 + | 50S ribosomal protein L34 rnpA 4620598 - 4620957 + | ribonuclease P TERM 5060 4620959 - 4620995 + F 100 -16.7 -3.14211 | CTCCCGCATCCTGAT CGGGCTGATTAGGGGCT ATC AGCTCGTAATCAGTCCG TTGCTGGGGCCGCGT TERM 5061 4621342 - 4621326 - g 70 -9.3 -3.6053 | overlap 4621322 CCGGTGATAAAGCAA GCCAGGC TGT GCCAGGC AGCGGTCAGGGTCAA TERM 5062 4622143 - 4622127 - g 82 -6.5 -4.79955 | AGATTCAGAATAAAA TGGCGGA AAT TGCGCCA CATCTGGACCTGACT TERM 5063 4622807 - 4622789 - g 73 -5.9 -4.56597 | CGTGGTCTGGAAAAA CGTGGCT TACAC AGCCGCG AGAAGAAAAAATAAC yidC 4621181 - 4622821 + | putative inner membrane protein translocase component YidC TERM 5064 4622846 - 4622870 + F 100 -15.1 -4.40561 | overlap 4622843 ATAATCATGAGTATT TAGGGCGGTCA ATA TGACCGCCTTA TTCTTTTTACAGAAG TERM 5065 4623701 - 4623723 + G 71 -7.7 -4.07568 | opp_overlap 4623701, overlap 4623703 GGCGATTGTAACGGA TATCGCGGG CACCA CCCGTGATG TTTTACGGGAACACA trmE 4622964 - 4624328 + | tRNA modification GTPase TrmE TERM 5066 4624539 - 4624526 - g 73 -5.9 -4.4891 | opp_overlap 4624521 4624526 CCCATGATTATAAAA CCACG TGTA CGCGG CTTTATCTGTGTGAC TERM 5067 4624711 - 4624727 + G 72 -3.6 -4.86731 | AGCATTTGGTTGTGG CGCCGA TACGC TGGGCG TTTTCTTTGAACGCC TERM 5068 4624848 - 4624833 - g 73 -5.4 -4.65895 | opp_overlap 4624833 GCTTGTACGCAAAAA GCATCA ACGG CGATGC GTTCTCTGATGAGAT YPO4104 4624514 - 4625713 + | trans-2-enoyl-CoA reductase TERM 5069 4625727 - 4625771 + T 78 -9.3 -3.73534 | opp_overlap 4625736, overlap 4625729 4625736 AAGCTCCGGTTTATT GCTCAATAACCTGCTGCGTCA CTA TCACGCAGCAGGTTGATCATC TTCTTACTGGGGTTA TERM 5070 4625729 - 4625769 + T 80 -10.5 -3.44552 | opp_overlap 4625736, overlap 4625727 4625736 GCTCCGGTTTATTGC TCAATAACCTGCTGCGTCA CTA TCACGCAGCAGGTTGATCA TCTTCTTACTGGGGT TERM 5071 4625736 - 4625762 + T 100 -15.2 -3.30452 | opp_overlap 4625736, overlap 4625729 4625727 TTTATTGCTCAATAA CCTGCTGCGTCA CTA TCACGCAGCAGG TTGATCATCTTCTTA TERM 5072 4625762 - 4625736 - T 100 -15.2 -3.62597 | opp_overlap 4625736 4625729 4625727 TTTATTGCTCAATAA CCTGCTGCGTCA CTA TCACGCAGCAGG TTGATCATCTTCTTA YPO4105 4626456 - 4626181 - | hypothetical protein YPO4106 4627144 - 4626524 - | hypothetical protein yieG 4629017 - 4627689 - | Xanthine/uracil permeases family protein TERM 5073 4628122 - 4628107 - G 78 -6 -4.75219 | GAAGTACCAATAAAA GCACCG GCAA CGGAGC TGATACTGTCCACAT TERM 5074 4628477 - 4628452 - G 76 -6.1 -4.73677 | overlap 4628454 GCGATAATAAAGAAA CCCAGTGCACC CAAC AGTACACTGTG AGAGGTCAGATTACC TERM 5075 4629082 - 4629097 + H 75 -3.2 -5.19916 | AAAATCATTTGTTTA GAGCGT GATC ACACTC TTTTTTACCTCTTTT TERM 5076 4629328 - 4629302 - H 84 -10.1 -3.82218 | gap 1, opp_overlap 4629311, overlap 4629303 4629318 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 5077 4629329 - 4629303 - H 72 -10.1 -2.88849 | gap 1, opp_overlap 4629311, overlap 4629302 4629318 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT TERM 5078 4630040 - 4630055 + G 87 -8.2 -4.75472 | overlap 4630030 4630031 CCAGGCCGGGATTGC CGCCGG TATT CCGGTG TTTTATTACTGTGCC YPO4108 4629510 - 4630178 + | 6-phosphogluconate phosphatase YPO4109 4630968 - 4630213 - | putative amino acid transport system permease TERM 5079 4630865 - 4630845 - G 74 -11.1 -3.0395 | ACACAGTGCCTAATA CGGCTGAGG CTA CCCCAGCCA TGATACTGATCACCA YPO4110 4631707 - 4630970 - | ABC transporter permease YPO4111 4632744 - 4631890 - | putative periplasmic solute-binding protein YPO4112 4633635 - 4632964 - | hypothetical protein TERM 5080 4633921 - 4633897 - R 100 -7.8 -5.626 | GAGTGGATAAAAAAA CCGGTCAAAC GAGTA GGCTGACCGG GGTTAAATATTATTT phoU 4634653 - 4633931 - | transcriptional regulator PhoU pstB 4635517 - 4634741 - | phosphate transporter subunit pstA 4636485 - 4635598 - | phosphate transporter permease subunit pstC 4637458 - 4636487 - | phosphate transporter permease subunit pstS 4638712 - 4637672 - | phosphate transporter subunit TERM 5081 4639147 - 4639130 - R 100 -9.1 -5.61913 | opp_overlap 4639130 AATAAAGACAAAAAA GCCGACA AATT TGCCGGC TTTCGTTAATACGCT glmS 4641024 - 4639195 - | D-fructose-6-phosphate amidotransferase glmU 4642595 - 4641225 - | bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase TERM 5082 4641847 - 4641820 - G 71 -5.4 -4.54727 | CCGCGCAAATCAAAA CGGGAGGGATCC AATA GCATCACGCCCG CTAACAATAATTTTT TERM 5083 4642021 - 4642011 - G 71 -5.4 -4.55287 | GTCAGTGATATAAAA CTCA CCT TGAG CATTATTATTATCCA TERM 5084 4642238 - 4642215 - G 70 -8.8 -3.63515 | TTTTACTGTCAACAA GCCAATCCCG CCCT CGGGCTTAGC GGCCAGCAGACGTTG TERM 5085 4642754 - 4642771 + r 91 -4.8 -5.61596 | AAAAGTGTCGGTGAT CGGCGA CGTTTT TTGCCG TTTTTTTGTCAAAAT TERM 5086 4642866 - 4642833 - R 100 -10.6 -4.57353 | gap 1, opp_overlap 4642832 4642833 TTTTACGACAGAAAA CAAGGATTATCCGAA AGAAA TTCG-ATAATCCTTG CTTATGATTTATTGA TERM 5087 4642833 - 4642866 + r 75 -10.6 -2.80654 | gap 1, opp_overlap 4642833, overlap 4642832 TTTTACGACAGAAAA CAAGGATTATCCGAA AGAAA TTCG-ATAATCCTTG CTTATGATTTATTGA TERM 5088 4643092 - 4643067 - R 100 -14.1 -5.22794 | opp_overlap 4643067 ATAAGTATTAAAAAA TGCCAGTCAGT TTTC ACCGACTGGCA TTCTATCGTTACTTA TERM 5089 4643067 - 4643092 + r 93 -11.9 -3.62476 | opp_overlap 4643067 ATAAGTATTAAAAAA TGCCAGTCAGT TTTC ACCGACTGGCA TTCTATCGTTACTTA atpC 4643638 - 4643216 - | F0F1 ATP synthase subunit epsilon atpD 4645042 - 4643660 - | F0F1 ATP synthase subunit beta atpG 4646061 - 4645198 - | F0F1 ATP synthase subunit gamma TERM 5090 4645294 - 4645317 + g 70 -8 -3.76402 | CAGCTCTTTGATCAG GCTACCGCCG TTAT CGGTGGCGGC TTTCATCGCTACCAT TERM 5091 4646115 - 4646085 - R 89 -12.7 -2.82516 | gap 1, overlap 4646110 CTCCTCATTACCAGA CGG-CCTGCTTTCC TAAC GAAAAGCAGGACCG CATAGCGTTACCAGG atpA 4647664 - 4646123 - | F0F1 ATP synthase subunit alpha atpH 4648212 - 4647679 - | F0F1 ATP synthase subunit delta atpF 4648697 - 4648227 - | F0F1 ATP synthase subunit B atpE 4648998 - 4648759 - | F0F1 ATP synthase subunit C atpB 4649872 - 4649048 - | F0F1 ATP synthase subunit A TERM 5092 4649550 - 4649530 - G 76 -6.1 -4.71426 | TGTTCATCAATAAAA CCCAAACAA AGA CTGTTAGGG CTAATGGTGCGATGA atpI 4650295 - 4649912 - | F0F1 ATP synthase subunit I gidB 4651582 - 4650962 - | glucose-inhibited division protein B gidA 4653617 - 4651728 - | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA