TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.508208 %AT, 3771189 nt, 31279 terms. Intergenic: 0.580052 %AT, H2T: 636256 nt, 4960 terms; T2T: 184840 nt, 3578 terms; H2H: 276290 nt, 3840 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|145597103|ref|NC_009377.1| Yersinia pestis Pestoides F plasmid CD, complete sequence (length 71507) YPDSF_3938 785 - 1033 + | phospholipase D/transphosphatidylase YPDSF_3939 1171 - 1425 + | replication protein YPDSF_3940 1620 - 1468 - | hypothetical protein TERM 1 1615 - 1569 - G 91 -7.4 -5.1417 | gap 1 CCAGAAAAGCAAAAA CCCCGATAAACTTCCTCATCT TTGGCG AGGCGA-GAAGGTTACCGGGG CCCACTTAAAACTGT TERM 2 1653 - 1627 - H 83 -8.9 -4.18018 | gap 1 GGGGCCCACTTAAAA CTGTATAGAAGC TGTT GCT-CTATACAG GGAGTATATGTGCAT TERM 3 2089 - 2108 + G 76 -4.8 -4.9792 | overlap 2080 ACCTTTCCATCACCC GCGCCACG CGTG CGCTGCGC TTTTTATCTGAGCTG YPDSF_3941 1734 - 2600 + | replication protein TERM 4 3178 - 3140 - f 100 -20.2 -4.7497 | opp_overlap 3140 CTTACCCACTAAAAA GCCGCCCCGCCCCGGGCC AAC GGCCCGGAACAGAGTGGC TTTACAATGAGTGTT TERM 5 3140 - 3178 + F 100 -13.6 -3.61922 | opp_overlap 3140 CTTACCCACTAAAAA GCCGCCCCGCCCCGGGCC AAC GGCCCGGAACAGAGTGGC TTTACAATGAGTGTT YPDSF_3942 3773 - 4012 + | hypothetical protein TERM 6 4103 - 4114 + F 78 -7.2 -4.45168 | CATCAGCCCTGGCAA GGCG AAGC CGCC TTTGTCTTTTGCAAC TERM 7 4938 - 4971 + F 100 -5.9 -5.84432 | gap 1, opp_overlap 4949, overlap 4939 CCAATCTTAGGATTT TCTGGACCAGAGGCGC GCA GCGCCGCTAGTC-AGC TTTTTTTCTGTTATA TERM 8 4939 - 4970 + F 85 -9.4 -4.08219 | gap 1, opp_overlap 4949, overlap 4938 CAATCTTAGGATTTT CTGGACCAGAGGCGC GCA GCGCCGCTAGTC-AG CTTTTTTTCTGTTAT TERM 9 4961 - 4949 - f 75 -10.5 -2.78463 | opp_overlap 4939 4938 ATTTTCTGGACCAGA GGCGC GCA GCGCC GCTAGTCAGCTTTTT TERM 10 5360 - 5370 + G 74 -2.4 -5.14985 | GTGTTGCGCTTGAAC CCCC ACA GTGG TTTTTCTCTCTTTCG YPDSF_3944 5204 - 7402 + | targeted effector protein kinase TERM 11 7600 - 7614 + F 78 -5.8 -4.77757 | opp_overlap 7599 7600 GTAATAGAGAAAATT TTTGAT GCT ATCAAA TTTTCCTTTTTCGCA YPDSF_3945 7798 - 8664 + | targeted effector protein TERM 12 8772 - 8798 + F 73 -5.1 -4.65895 | opp_overlap 8773, overlap 8773 TGAAGAAACAGATTA ACTGGGGTTCT ACGCC GGAATCCCAGA TTTTTCCGTCACCCC YPDSF_3946 8945 - 9037 + | hypothetical protein YPDSF_3947 9897 - 9250 - | hypothetical protein YPDSF_3948 9858 - 10064 + | hypothetical protein TERM 13 10758 - 10794 + G 100 -26.7 -2.54523 | TCTCATTCACATTCA GCCCTTCACGCACCGGG GTT CCCGGTGCGTGAAGGAC TGCGTTCACATCTAG YPDSF_3949 10347 - 11753 + | protein-tyrosine phosphatase Yop effector TERM 14 11826 - 11862 + T 77 -11.2 -2.85999 | opp_overlap 11825 11830, overlap 11830 CAATCAAAGAAACTT TAAACCTCAACTAA AGTAAGCAA TTAGTTGAGGTTTA TCTGCTGTAGAATAA TERM 15 11858 - 11830 - T 72 -7.6 -3.78141 | opp_overlap 11830 11826, overlap 11825 CAAAGAAACTTTAAA CCTCAACTAA AGTAAGCAA TTAGTTGAGG TTTATCTGCTGTAGA TERM 16 11830 - 11858 + T 76 -7.6 -4.11404 | opp_overlap 11825 11830, overlap 11826 CAAAGAAACTTTAAA CCTCAACTAA AGTAAGCAA TTAGTTGAGG TTTATCTGCTGTAGA TERM 17 12000 - 11979 - T 78 -8.7 -3.74693 | CGCCACTGTATTAAA GGTGATCGT TTAG ACGGTCACC GAACTCGATAATAAA YPDSF_3950 12153 - 11974 - | hypothetical protein YPDSF_3951 12429 - 12265 - | transposase YPDSF_3952 13247 - 12468 - | transposase/IS protein TERM 18 13166 - 13180 + g 77 -11.4 -3.3506 | overlap 13179 CTGCCTGTTGTGACA GCGCAG GCG CTGCGC TTATAAGGCTTTCCA YPDSF_3953 14269 - 13247 - | transposase TERM 19 14291 - 14273 - R 100 -13.2 -4.01078 | AAAAGTGACCATAAA CTCTCCTG AAT CAGGAGAG CAGATTACCCCCTGG YPDSF_3954 14533 - 14351 - | transposase YPDSF_3955 14964 - 14530 - | transposase YPDSF_3956 15254 - 14988 - | transposase ORFA TERM 20 15805 - 15837 + r 71 -9 -3.32536 | ATATATATTATCTCA GCCGTCAGCCGCCG TATCC TGGCGCATGGCGGC TTCTAGCAATAATTT YPDSF_3957 16149 - 15802 - | type III secretion regulatory protein YPDSF_3958 17006 - 16374 - | type III secretion system protein YPDSF_3959 17614 - 16985 - | type III secretion protein YPDSF_3960 18348 - 17614 - | type III secretion lipoprotein YPDSF_3961 18702 - 18355 - | type III secretion protein YPDSF_3962 19200 - 18703 - | type III secretion protein TERM 21 18995 - 18965 - G 73 -9.1 -3.65351 | TGATGTTGACCGAAA CG-CGCCAGTAACGC CTC ACGT-ACTGGCGTCG CCAAAACCTCAAGAA YPDSF_3963 19544 - 19197 - | type III secretion protein YPDSF_3964 19809 - 19546 - | type III secretion protein YPDSF_3965 20010 - 19810 - | type III secretion protein YPDSF_3966 21266 - 20007 - | type III secretion protein TERM 22 20912 - 20933 + g 71 -5.1 -4.55287 | TCCCAAGTCGTGAAC GAGGTAACC TGTC GGTTGGCTC TTTTCTCTGCGTGGG YPDSF_3967 23086 - 21263 - | type III secretion protein TERM 23 21600 - 21586 - G 74 -10 -3.57406 | opp_overlap 21584 21599, overlap 21584 GTTCGATGATAAACA GCCGTA CCG TACGGC GAGTTAACTCACTTT TERM 24 21787 - 21799 + g 72 -4.1 -4.87291 | GGATTCCGTCAATCC CTGAA CTA TTCGG TTTTTGGTTCCCATC YPDSF_3968 23505 - 23092 - | hypothetical protein YPDSF_3969 24723 - 23908 - | thermoregulatory protein TERM 25 25050 - 25040 - R 73 -5.4 -4.73973 | opp_overlap 25040 25042 ATAGAAAAGAATAAA GGTA GGT TACC TGTTTCGAAATGAGT TERM 26 25459 - 25421 - R 100 -15.6 -4.03234 | opp_overlap 25427, overlap 25422 CCTTGCGCATATAAA GCCAAACATCCTTTCTTT CAT AAAAAAAGGATGTTTGGT TAGAATCGGAATCAG TERM 27 25458 - 25422 - R 100 -19.1 -3.01726 | opp_overlap 25427, overlap 25421 CTTGCGCATATAAAG CCAAACATCCTTTCTTT CAT AAAAAAAGGATGTTTGG TTAGAATCGGAATCA TERM 28 25427 - 25453 + r 83 -9.6 -3.91911 | opp_overlap 25422 25421 GCATATAAAGCCAAA CATCCTTTCTTT CAT AAAAAAAGGATG TTTGGTTAGAATCGG YPDSF_3970 26881 - 25817 - | type III secretion protein YPDSF_3971 27666 - 26881 - | type III secretion protein TERM 29 27199 - 27187 - G 70 -4.7 -4.67011 | opp_overlap 27188 27189, overlap 27188 27189 AACTGCAGGGAAAAA GCTGG CCA CCGGC CAATTTACATAGCTG YPDSF_3972 27929 - 27663 - | type III secretion protein YPDSF_3973 28584 - 27931 - | type III secretion system protein YPDSF_3974 29504 - 28581 - | type III secretion system protein YPDSF_3975 30868 - 29501 - | type III secretion protein YPDSF_3976 31332 - 30868 - | type III secretion protein YPDSF_3977 32648 - 31329 - | type III secretion system ATPase TERM 30 32490 - 32459 - G 71 -11.6 -2.74605 | opp_overlap 32465, overlap 32455 32456 GTTGGGCAAAACCTA TGACTTCAGCCTGT AAAG ACAGGCTGTTGTCA GGGTTACGTAAGTAA TERM 31 32465 - 32484 + g 79 -12.2 -3.3344 | opp_overlap 32459 32455 32456 CAAAACCTATGACTT CAGCCTGT AAAG ACAGGCTG TTGTCAGGGTTACGT TERM 32 32713 - 32696 - H 71 -4.1 -4.7497 | opp_overlap 32708 32709, overlap 32708 TTTAGTGACTAAAAA CGCTAAA AAAT TGTAGCG GGAGCCGCGAGTTTT YPDSF_3978 32846 - 33727 + | membrane-bound Yop targeting protein YPDSF_3979 33708 - 33986 + | Yop secretion and targeting protein YPDSF_3980 33973 - 34344 + | type III secretion protein YPDSF_3981 34341 - 34709 + | type III secretion protein YPDSF_3982 34706 - 35050 + | type III secretion protein TERM 33 35732 - 35763 + G 78 -9.5 -3.89822 | TGAGGCACTGCAACT CTATTCCATCCTC ACTGTC GGGGATGGGATGG TTTCTCAGGTACCTG YPDSF_3983 35037 - 37151 + | membrane-bound Yop protein YPDSF_3984 37148 - 37588 + | hypothetical protein YPDSF_3985 37630 - 37917 + | Yop regulator TERM 34 38791 - 38781 - g 76 -3.2 -5.08824 | opp_overlap 38785, overlap 38785 TGGTTAGCCAAAAAA CAAC TCA GCTG TCTGATATTACATCA YPDSF_3986 37919 - 38893 + | V antigen, antihost protein/regulator YPDSF_3987 38896 - 39402 + | yopB/yopD chaperone TERM 35 39772 - 39756 - g 91 -6.5 -5.14985 | opp_overlap 39755 39757, overlap 39757 GCAAAGACATAAAAA TCGCTGA TAT TCAGCGT CTTCATGAACAAAAC TERM 36 39771 - 39757 - g 77 -10 -3.67364 | opp_overlap 39757 39755, overlap 39756 CAAAGACATAAAAAT CGCTGA TAT TCAGCG TCTTCATGAACAAAA YPDSF_3988 39380 - 40585 + | Yop targeting protein YPDSF_3989 40604 - 41524 + | Yop negative regulation/targeting component TERM 37 41653 - 41624 - f 85 -9.4 -4.10007 | opp_overlap 41614 41618 41625, overlap 41613 41614 41625 ATAAGGTGCTGAAAA GCCCTGGATTAA TATTAG TTAATCCAGGGT TGTGATTATTAAATT TERM 38 41652 - 41625 - f 95 -12.9 -3.05522 | opp_overlap 41614 41625 41618, overlap 41613 41614 41624 TAAGGTGCTGAAAAG CCCTGGATTAA TATTAG TTAATCCAGGG TTGTGATTATTAAAT TERM 39 41625 - 41652 + F 100 -13.6 -3.6149 | opp_overlap 41613 41614 41624 41625, overlap 41614 41618 TAAGGTGCTGAAAAG CCCTGGATTAAT ATTA GTTAATCCAGGG TTGTGATTATTAAAT TERM 40 43249 - 43270 + G 77 -10.1 -3.74693 | TTTATTATCGAGTTC GGTGACCGC CTGA GCGATCACC TTTAATACGGTGGCA YPDSF_3990 42067 - 43275 + | transposase YPDSF_3993 43952 - 43830 - | hypothetical protein YPDSF_3994 43973 - 44182 + | hypothetical protein YPDSF_3995 44293 - 44388 + | hypothetical protein TERM 41 44597 - 44607 + F 74 -4 -5.00616 | opp_overlap 44597 ATAAATCCAAGAAAT GTAT CTA ATAC TTTTTTGCAAGAACC YPDSF_3996 44753 - 45805 + | targeted effector protein YPDSF_3997 46147 - 45848 - | hypothetical protein YPDSF_3998 46322 - 46513 + | hypothetical protein TERM 42 47156 - 47138 - T 71 -3 -4.93898 | opp_overlap 47155, overlap 47139 47142 ATACCAGCATAAAAA GCAGCGCA CAA TGCGGTGG CTATCACTAGTCGTT YPDSF_3999 47600 - 47478 - | hypothetical protein TERM 43 48083 - 48104 + r 70 -7.5 -3.8397 | opp_overlap 48080 48083 48085 TTATTATATAAACCA TATCTATTA AATT TAATAGATA TTATTGTAACTATGT YPDSF_4000 48539 - 48165 - | yopT chaperone YPDSF_4001 49342 - 48563 - | cytotoxic effector protein TERM 44 49272 - 49257 - G 73 -6.2 -4.46212 | GTGCTGAGTACAAAA TGTATC ATGC GATACA TAATCATACTGAAGG TERM 45 49927 - 49937 + H 74 -4 -4.91712 | GAAGCTCATTGAGAG TAGA TAT TCTA TTTTTATAAATTACG TERM 46 50451 - 50434 - H 71 -4.9 -4.63527 | overlap 50435 TTATGATCCGAAAAA CTCTCTA CTTA TAGAGAA TGATGACATAAAAAA TERM 47 50476 - 50493 + H 80 -4.9 -5.16133 | opp_overlap 50479, overlap 50477 AAAAAAATATTTATA TGATGAA GATT TTCATCG TTTTTGTATTATGCT YPDSF_4002 50722 - 50961 + | hypothetical protein TERM 48 51260 - 51250 - g 85 -4 -5.4251 | TCTACAGATAAAAAA TATC TCA GATA AAAATATGCTTGGCT YPDSF_4003 51188 - 51805 + | conjugative transfer surface exclusion protein YPDSF_4004 51912 - 52229 + | hypothetical protein YPDSF_4005 52253 - 52711 + | hypothetical protein YPDSF_4006 52823 - 53017 + | hypothetical protein YPDSF_4007 53268 - 53155 - | hypothetical protein YPDSF_4008 53775 - 54983 + | plasmid-partitioning protein SopA YPDSF_4009 54980 - 55945 + | plasmid-partitioning protein TERM 49 55968 - 55986 + T 73 -5.9 -4.55209 | opp_overlap 55968 ATAAGATCAGAACAA GGTGGGT TGTCT GCCCGCC TTTATTTAGTGTATA YPDSF_4010 56573 - 56400 - | hypothetical protein TERM 50 56499 - 56525 + g 100 -13.1 -4.72986 | CTGACCTGGTCGACT GCCGACGTCAT TAAGC ATGATGTCGGC TTTTTGATAGCGATA YPDSF_4011 57118 - 57360 + | hypothetical protein YPDSF_4012 57353 - 57652 + | hypothetical protein TERM 51 57734 - 57705 - T 74 -4.4 -5.06451 | gap 2, opp_overlap 57706, overlap 57706 57708 GAGCATGCTAAAAAA CGATTCGCCCCTGA AAGA TCAGGGACGAA--G ATATTCGCAATATTG TERM 52 57733 - 57708 - T 100 -14.1 -3.38726 | opp_overlap 57706, overlap 57705 57706 CATGCTAAAAAACGA TTCGCCCCTGA AAGA TCAGGGACGAA GATATTCGCAATATT TERM 53 57777 - 57759 - T 71 -3 -4.99638 | opp_overlap 57757 57760, overlap 57760 ATATTGATAGAAAAA GGGGGAAA CAC TATCCCCT TGTTTTTATCCATAT TERM 54 57760 - 57776 + T 74 -6.5 -4.5448 | opp_overlap 57760 57759, overlap 57757 TATTGATAGAAAAAG GGGGAAA CAC TATCCCC TTGTTTTTATCCATA YPDSF_4013 58451 - 57792 - | outer membrane virulence protein TERM 55 58513 - 58501 - H 76 -7.7 -4.11394 | ATCTTAGTGGGAAAA TAGCC GAT GGCTA TATAAAAAATCGCTG YPDSF_4014 58645 - 59037 + | yopE chaperone YPDSF_4015 59714 - 59100 - | hypothetical protein TERM 56 60079 - 60064 - g 71 -10.4 -3.03338 | AGAATGTCTGGAATA GCGAGG TCAT CCTCGC GGAAATTAAGGCGAT YPDSF_4016 59847 - 61019 + | transposase YPDSF_4017 61019 - 61450 + | transposase YPDSF_4018 61794 - 62219 + | yopH targeting protein YPDSF_4019 63122 - 62367 - | transposase YPDSF_4020 63466 - 63200 - | transposase YPDSF_4021 65068 - 64517 - | resolvase TERM 57 66119 - 66102 - g 72 -9.9 -3.35774 | opp_overlap 66117 CATAAAGGCGTACAA CAGTTGG CGGT CCAACTG GATGAAACCTGGAGA YPDSF_4022 65232 - 67547 + | transposase YPDSF_4023 67924 - 67544 - | hypothetical protein TERM 58 68782 - 68772 - H 73 -5.4 -4.62054 | TCCAGAAAAAAAAGA GCTA GAT TAGC AGAAGCAATACAACC TERM 59 69372 - 69360 - g 73 -3.4 -5.0133 | GATGCGGCCAAAAAA CACT CAAAT AGTG TTGCCAGAACAACTT YPDSF_4024 68913 - 69833 + | hypothetical protein TERM 60 69867 - 69892 + F 100 -8.4 -4.76075 | opp_overlap 69867, overlap 69862 AAGTCTATAGGAAAA CACCGATTAC ATAATC GTAATTGGTG TTTTATTAATATGCT TERM 61 69892 - 69867 - f 74 -6.9 -4.35518 | opp_overlap 69867 69862 AAGTCTATAGGAAAA CACCGATTACA TAAT CGTAATTGGTG TTTTATTAATATGCT YPDSF_4025 69956 - 70162 + | hypothetical protein YPDSF_4026 70347 - 70159 - | hypothetical protein TERM 62 70489 - 70525 + H 100 -28.3 -3.35798 | opp_overlap 70494, overlap 70494 TTACGCGGCGCTGGA GTAAACCAATGGGCGGC ATG GCCGCCCATTGGTTTAC TTATCAGTACGCAGT TERM 63 70520 - 70494 - H 100 -22.4 -3.72576 | opp_overlap 70489 70494 CGGCGCTGGAGTAAA CCAATGGGCGGC ATG GCCGCCCATTGG TTTACTTATCAGTAC TERM 64 70494 - 70520 + H 100 -22.4 -4.00868 | opp_overlap 70494, overlap 70489 CGGCGCTGGAGTAAA CCAATGGGCGGC ATG GCCGCCCATTGG TTTACTTATCAGTAC YPDSF_4027 70497 - 70955 + | hypothetical protein YPDSF_4028 71127 - 71444 + | hypothetical protein SEQUENCE gi|145597192|ref|NC_009378.1| Yersinia pestis Pestoides F plasmid MT, complete sequence (length 137010) YPDSF_4029 87 - 1109 + | transposase TERM 1 1190 - 1176 - g 77 -11.4 -3.3506 | overlap 1167 TGGAAAGCCTTATAA GCGCAG CGC CTGCGC TGTCACAACAGGCAG YPDSF_4030 1109 - 1888 + | transposase/IS protein YPDSF_4031 2630 - 2022 - | hypothetical protein TERM 2 2378 - 2389 + g 71 -7.2 -4.11404 | opp_overlap 2376 2378, overlap 2369 GTTCAGCGATGAACA CCGG TTCA CCGG TTTCTGTGCTGTAAA YPDSF_4032 5820 - 2932 - | phage tail protein TERM 3 4982 - 5016 + g 83 -12.8 -3.6106 | overlap 4984 5013 GCTTCATTTTCACTA TTGGCTGCCGCTGCTT CTG AAGCAGCAGCAGCCTC TTTAGAGGTCTTGGC TERM 4 4984 - 5014 + g 100 -19.8 -3.38201 | overlap 4982 5013 TTCATTTTCACTATT GGCTGCCGCTGCTT CTG AAGCAGCAGCAGCC TCTTTAGAGGTCTTG TERM 5 5107 - 5137 + g 70 -8.2 -3.68726 | CGCAGCAGCCTTGCT TTCAGCCGCATTGG TCT CTGACGCGGCAGAA TTATCTTCAGATGTT TERM 6 5223 - 5246 + g 71 -5.2 -4.46926 | overlap 5225 CCGATGCTTTTGATG CAGCGGCA CTTAGCTC TGCCGCAG TTTTATACTCAGATG TERM 7 5856 - 5837 - R 76 -9.2 -3.53012 | TTCGCTCCTTGTAAA GGCGGGCA TCCC TGCTCGCC ATAGGTAATCACTTA TERM 8 5921 - 5896 - R 71 -4.7 -4.63044 | gap 1 ACCGATATAAAGAAA GATGTCTACCGC CGA GCAG-AGCCATC CCCCCACCCGACCTG YPDSF_4033 6518 - 5901 - | hypothetical protein YPDSF_4034 11167 - 6536 - | phage tail protein YPDSF_4035 11776 - 11189 - | phage tail protein YPDSF_4036 12522 - 11764 - | phage tail protein YPDSF_4037 13252 - 12554 - | phage tail protein TERM 9 13299 - 13273 - R 95 -9.4 -4.41348 | overlap 13275 CTTCCTTGAAATAAA GAGGCGCCAACA TCC TGTCAGCGCCTA TAGATAATAGTAAAT TERM 10 13297 - 13275 - R 100 -12 -3.81557 | overlap 13273 TCCTTGAAATAAAGA GGCGCCAACA TCC TGTCAGCGCC TATAGATAATAGTAA YPDSF_4038 13677 - 13342 - | phage tail protein YPDSF_4039 18296 - 13719 - | membrane protein TERM 11 15118 - 15143 + g 82 -10.5 -3.94409 | gap 1, overlap 15117 TCGTCGCTCGCGTTC GCCAGGTCAGCG AGG CG-TGACTTGGC TTTGTCGATCATCTC TERM 12 16763 - 16773 + g 76 -6.8 -4.56597 | opp_overlap 16763 TGCCCAGGCTGATAA CCAG CTC CTGG TTTTTAGCCAGCCAC TERM 13 18080 - 18092 + g 78 -6.3 -4.85599 | GCTCGAAGCCGGCAG CTACA TCC TGTAG TTTTTCTGCCGTGAC YPDSF_4040 18537 - 18304 - | hypothetical protein YPDSF_4041 18971 - 18654 - | hypothetical protein TERM 14 19014 - 18992 - R 76 -7.7 -4.0896 | opp_overlap 18992 18994, overlap 18981 18994 AAAGTCCTTTTAAAA GAGAGGCTC TTCCT GAGCCTCTG CTTAATTACGTCGCG TERM 15 19012 - 18994 - R 82 -10.3 -3.63922 | opp_overlap 18992 18994, overlap 18992 AGTCCTTTTAAAAGA GAGGCTC TTCCT GAGCCTC TGCTTAATTACGTCG TERM 16 18994 - 19012 + r 75 -10.3 -2.8507 | opp_overlap 18994 18992, overlap 18992 AGTCCTTTTAAAAGA GAGGCTC TTCCT GAGCCTC TGCTTAATTACGTCG YPDSF_4042 19777 - 19031 - | hypothetical protein TERM 17 19239 - 19278 + g 84 -10.8 -4.10453 | gap 1, opp_overlap 19276, overlap 19228 19274 AGTTGCACGGTCTCA CCGGCTTTAACT-TCCGGA GAT TCCGGAGAGATAGAGACGG TTTTAACCGGCTTTG YPDSF_4043 20235 - 19852 - | hypothetical protein YPDSF_4044 20710 - 20237 - | hypothetical protein YPDSF_4045 21045 - 20701 - | hypothetical protein YPDSF_4046 21976 - 21143 - | hypothetical protein YPDSF_4047 22410 - 21976 - | hypothetical protein TERM 18 22424 - 22449 + r 95 -12.7 -3.33696 | gap 1, opp_overlap 22427, overlap 22425 22427 ATTCTTCTTCTCACT TA-ATGGGCGGC TAT GCCGCCCATGTA TTGGTTACGCAGCCG TERM 19 22425 - 22447 + r 100 -13.4 -3.23853 | opp_overlap 22427, overlap 22424 22427 TTCTTCTTCTCACTT AATGGGCGGC TAT GCCGCCCATG TATTGGTTACGCAGC TERM 20 22427 - 22445 + r 100 -16 -3.18366 | opp_overlap 22427, overlap 22425 22424 CTTCTTCTCACTTAA TGGGCGGC TAT GCCGCCCA TGTATTGGTTACGCA TERM 21 22445 - 22427 - R 100 -16 -3.05384 | opp_overlap 22427 22425 22424 CTTCTTCTCACTTAA TGGGCGGC TAT GCCGCCCA TGTATTGGTTACGCA YPDSF_4048 23116 - 22454 - | hypothetical protein TERM 22 23155 - 23135 - R 100 -14 -4.82901 | opp_overlap 23135 TCGCTCCTACAAAAA GGGTGGGC GTATA GCCCACCC TTAAATGGTAGATAA TERM 23 23135 - 23155 + r 100 -14 -3.10164 | opp_overlap 23135 TCGCTCCTACAAAAA GGGTGGGC GTATA GCCCACCC TTAAATGGTAGATAA YPDSF_4049 24066 - 23191 - | hypothetical protein YPDSF_4050 24989 - 24093 - | hypothetical protein YPDSF_4051 26601 - 25012 - | hypothetical protein YPDSF_4052 27876 - 26620 - | hypothetical protein TERM 24 27586 - 27613 + g 74 -2.6 -5.06414 | overlap 27589 GATTTCAGAGCCGTT CTTCAGCACGAT GGTC ATCGTGGTGTCG TTTTTCTTACGAACC TERM 25 27673 - 27715 + g 80 -9.8 -4.04188 | ATCCCACAAGATCTG GCGAGCCATCTGGTACGTCG GTG CGACGTACCAGACACGTTGC TTCTTCTCTTTGGCT YPDSF_4053 28520 - 27879 - | hypothetical protein TERM 26 28487 - 28505 + g 72 -3.8 -4.86001 | ACTCAGCTGGCGTCA GGCGAG TTTTGCT CTCGTC TTTTTCTACAGTCAT TERM 27 28690 - 28636 - R 89 -11.9 -3.37796 | gap 2, opp_overlap 28654 28657 GGGGAGTATTCAGAA CCTGCTTCCGTATATAT--TTAATAAG TCA CTTAGTATTTATATATACGGAAGCAGG CTCTCAAACTGGCTC YPDSF_4054 28982 - 28716 - | hypothetical protein YPDSF_4055 29882 - 28992 - | hypothetical protein YPDSF_4056 30142 - 29888 - | hypothetical protein TERM 28 30018 - 30030 + g 83 -9.1 -4.34267 | opp_overlap 29991 29992 30018 30017 TTGATCATCAGCAAC GCCAG ACT CTGGC TTTTACCTTCTCTGG YPDSF_4057 30773 - 30135 - | ABC transporter ATP-binding protein TERM 29 30453 - 30472 + g 80 -10 -4.08945 | gap 1, opp_overlap 30449 30452 30447, overlap 30455 GGCCATAGACAGCAG CC-CCAGCG CAT CGCTGGTGG TTTTGCCCAACTGGT TERM 30 30455 - 30469 + g 74 -11.4 -3.08211 | opp_overlap 30449 30452 30447, overlap 30453 CCATAGACAGCAGCC CCAGCG CAT CGCTGG TGGTTTTGCCCAACT YPDSF_4058 31438 - 30770 - | hypothetical protein TERM 31 31328 - 31366 + g 74 -2.5 -5.10029 | overlap 31330 31336 31340 AAAACCGCGCTTTTT GATGGCGG-CAGCCAGGTC GCG GATCTG-CTGTTCGTCATG TTTTTTGGCGTTCAT YPDSF_4059 32136 - 31438 - | hypothetical protein TERM 32 32453 - 32439 - g 74 -4.2 -4.8622 | opp_overlap 32443 GTGCGCAAGGAAAAA GCCC CCGCGCT GGGC AAGCCGAACCCGGTA YPDSF_4060 32205 - 33764 + | hypothetical protein YPDSF_4061 33767 - 34045 + | hypothetical protein TERM 33 34054 - 34069 + F 86 -10.4 -3.8186 | opp_overlap 34053 34054 CGATTAAGCATTAAG GGCGTC GCAA GACGCC TTGTTCGTTGAAGTG TERM 34 34069 - 34054 - f 74 -10.4 -2.57136 | opp_overlap 34054, overlap 34053 CGATTAAGCATTAAG GGCGTC GCAA GACGCC TTGTTCGTTGAAGTG YPDSF_4062 34105 - 34527 + | lipoprotein YPDSF_4063 34532 - 35059 + | transcriptional regulator TERM 35 35071 - 35096 + F 100 -10.6 -4.62471 | opp_overlap 35077 TTAAATCTATAAGGG TAATAACCGG CTAAGT CCGGTTATTA TTTTATGTGTCACTT YPDSF_4064 35383 - 36033 + | hypothetical protein TERM 36 36071 - 36038 - f 100 -16.3 -3.3907 | gap 1, opp_overlap 36047 TCAAAGCGTAATTAA TTGAATATAGCGCCCA CTA TGGGCGCT-TATTCAA AAGATCTTAAGTCTG TERM 37 36047 - 36063 + F 100 -13.7 -3.62224 | opp_overlap 36038 AATTAATTGAATATA GCGCCCA CTA TGGGCGC TTATTCAAAAGATCT YPDSF_4151 36118 - 36345 + | hypothetical protein TERM 38 36375 - 36349 - f 100 -9.4 -5.69262 | opp_overlap 36354, overlap 36352 36354 TTAGAAAAATAAAAA CAATAGCGCCCA CTA TGGGCGCTTTTT TCGTTTCAAGATCCG TERM 39 36372 - 36352 - f 100 -11.1 -4.855 | opp_overlap 36354, overlap 36349 36354 GAAAAATAAAAACAA TAGCGCCCA CTA TGGGCGCTT TTTTCGTTTCAAGAT TERM 40 36370 - 36354 - f 100 -13.7 -3.97385 | opp_overlap 36354, overlap 36352 36349 AAAATAAAAACAATA GCGCCCA CTA TGGGCGC TTTTTTCGTTTCAAG TERM 41 36354 - 36370 + F 100 -13.7 -5.37593 | opp_overlap 36352 36349 36354 AAAATAAAAACAATA GCGCCCA CTA TGGGCGC TTTTTTCGTTTCAAG TERM 42 36418 - 36401 - f 100 -12.7 -3.4678 | opp_overlap 36401 ATCCGCACACCATAA CGCGCCA TTGT TGGCGCG TTTTTTATTGTGCCC TERM 43 36401 - 36418 + F 100 -12.7 -5.55769 | opp_overlap 36401 ATCCGCACACCATAA CGCGCCA TTGT TGGCGCG TTTTTTATTGTGCCC TERM 44 36458 - 36440 - f 100 -16 -4.37092 | opp_overlap 36440 ATTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC TERM 45 36440 - 36458 + F 100 -16 -3.07307 | opp_overlap 36440 ATTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC YPDSF_4065 36571 - 37029 + | transposase TERM 46 37103 - 37135 + T 100 -11.3 -4.05033 | opp_overlap 37110, overlap 37107 37109 37110 CCTTATAGGCGCATA TGAAAAACCTCCGGC TAT GCCGGAGGATATTTA TTTGTCTGAAGTCAG TERM 47 37107 - 37131 + T 100 -9.9 -4.62441 | opp_overlap 37110, overlap 37103 37109 37110 ATAGGCGCATATGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTTGTCTGAAG TERM 48 37109 - 37129 + T 100 -12.5 -3.91983 | opp_overlap 37110, overlap 37107 37103 37110 AGGCGCATATGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTTGTCTGA TERM 49 37128 - 37110 - T 100 -16 -4.8048 | opp_overlap 37109 37107 37103 37110 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTGTCTG TERM 50 37110 - 37128 + T 100 -16 -2.94105 | opp_overlap 37110, overlap 37109 37107 37103 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTGTCTG TERM 51 37274 - 37241 - T 82 -3 -5.56673 | opp_overlap 37241 37250 37251 ACCCACAATAAAAAA CACGTTATAGCGCG TTTTAG CGCGTTTTAGCGCG TGGCTTATTTTGTCG TERM 52 37701 - 37677 - T 75 -7.1 -4.25283 | opp_overlap 37677, overlap 37681 ACTGGTGGACGAAAA GAAAGGGGC GTTTCCA GCCCCTCCC CTCTTACTTGCCAGC TERM 53 37697 - 37681 - T 77 -6.5 -4.72007 | opp_overlap 37677, overlap 37677 GTGGACGAAAAGAAA GGGGC GTTTCCA GCCCC TCCCCTCTTACTTGC YPDSF_4066 38187 - 37705 - | hypothetical protein TERM 54 38384 - 38365 - R 79 -10.7 -3.06302 | opp_overlap 38362 38365, overlap 38354 38351 38352 38349 AGGATGGCCATTTAA GGCCACC AGCATG GGTGGCC TCGTTCTCTTAGTGG TERM 55 38365 - 38384 + r 79 -10.7 -2.95751 | opp_overlap 38354 38351 38352 38349 38365, overlap 38362 AGGATGGCCATTTAA GGCCACC AGCATG GGTGGCC TCGTTCTCTTAGTGG YPDSF_4067 38674 - 38393 - | hypothetical protein TERM 56 38796 - 38772 - R 93 -9.9 -4.30987 | opp_overlap 38775, overlap 38774 38775 ATCGGGTATAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCATATGCGCCTAT TERM 57 38794 - 38774 - R 100 -12.5 -3.75817 | opp_overlap 38775, overlap 38772 38775 CGGGTATAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 58 38793 - 38775 - R 100 -16 -2.85008 | opp_overlap 38775, overlap 38774 38772 GGGTATAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 59 38775 - 38793 + r 100 -16 -4.8048 | opp_overlap 38775 38774 38772 GGGTATAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC YPDSF_4068 39332 - 38874 - | transposase for the IS1541 insertion element TERM 60 39463 - 39445 - R 100 -16 -3.07307 | opp_overlap 39445 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 61 39445 - 39463 + r 100 -16 -4.36914 | opp_overlap 39445 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 62 39502 - 39483 - R 100 -9.3 -5.60993 | CTGGGCACAAAAAAA TGGTGGC TCTTCG GCCACCA TTGAAATGAGCAATT YPDSF_4069 40326 - 39571 - | hypothetical protein nrdB 41667 - 40525 - | ribonucleotide-diphosphate reductase subunit beta TERM 63 41770 - 41751 - R 82 -7.8 -4.45664 | opp_overlap 41744, overlap 41752 TCAACTCAATGAAAA GGTGGGGA TTTC TCCCCACG CTCATCAGATTTTGC TERM 64 41769 - 41752 - R 86 -11.3 -3.26675 | opp_overlap 41744, overlap 41751 CAACTCAATGAAAAG GTGGGGA TTTC TCCCCAC GCTCATCAGATTTTG YPDSF_4071 44090 - 41775 - | ribonucleotide-diphosphate reductase subunit alpha TERM 65 43188 - 43176 - G 70 -9.1 -3.5365 | CCAAATCGGATAGAA CGCTG TAG CAGCG CCACTGCGAACACCG TERM 66 43820 - 43798 - G 82 -10.6 -3.90586 | opp_overlap 43813 43815 ATATGATTGTAGAAA TTCGGGTAGT CAT ACTGCCCGAA GGCGTCCTTGCGGAT TERM 67 44022 - 44036 + g 70 -2.8 -4.8048 | opp_overlap 44024, overlap 44024 TTCGACTCCCCACAT CACAAC GCG GTTGTA TTTTTCCTCTGACAA TERM 68 44109 - 44128 + r 93 -12.2 -3.71998 | opp_overlap 44109 TCACCCAATAAAAAA GGCCACTA AATA TAGTGGCC TTATGTTAATAGATA TERM 69 44128 - 44109 - R 100 -12.2 -5.4833 | opp_overlap 44109 TCACCCAATAAAAAA GGCCACTA AATA TAGTGGCC TTATGTTAATAGATA YPDSF_4072 44737 - 44168 - | hypothetical protein YPDSF_4150 45496 - 44750 - | hypothetical protein TERM 70 45364 - 45374 + g 70 -3.2 -4.77757 | ATACCGAGAACTGGT CGTC ATT GATG TTTTCGTTTTTCCAC YPDSF_4073 47402 - 45486 - | exonuclease subunit 2 YPDSF_4074 48717 - 47632 - | exonuclease subunit 1 YPDSF_4075 49133 - 50155 + | periplasmic protein TERM 71 50164 - 50192 + T 82 -10.3 -3.65902 | opp_overlap 50166, overlap 50166 CAAATAGTCTCATTA CAGGCGGTTGTCT ACT GGACAATCGCCTA TTTACCTGGAGTGCA TERM 72 50166 - 50190 + T 100 -12.9 -3.41073 | opp_overlap 50166, overlap 50164 AATAGTCTCATTACA GGCGGTTGTCT ACT GGACAATCGCC TATTTACCTGGAGTG TERM 73 50190 - 50166 - T 72 -10 -2.79679 | opp_overlap 50166 50164 AATAGTCTCATTACA GGCGGTTGTC TACTG GACAATCGCC TATTTACCTGGAGTG YPDSF_4076 50964 - 50515 - | hypothetical protein TERM 74 51462 - 51441 - H 74 -6.5 -4.44797 | opp_overlap 51456 CTATGAAGAGCAAAA CAACCTCTC TGGA GAGTGGTCG GTATCCACTGTAGTG TERM 75 51839 - 51827 - H 70 -2.6 -4.96762 | opp_overlap 51836, overlap 51835 TAGAGAGTAGAAAAA CCAC TATAG GCGG TAGGATAACCGCTGT YPDSF_4077 51924 - 52988 + | replication protein A TERM 76 53013 - 53037 + T 100 -8.6 -5.05113 | opp_overlap 53013 TGTAGAGAGTAGAAA GGCTCACTAT CCGCT GTAGTGGGCC TTTTGTTTATCTGAA TERM 77 53178 - 53190 + T 70 -7.7 -3.68073 | GCTGCGAGGTTAGTG GTCAC TGG GTGAC TTGTTAAATCCACTC TERM 78 53465 - 53482 + T 74 -6.9 -4.2828 | CACTACAGTGGATAC CGGATGC CACG GCAGCCG TTTTACTCACTACAG YPDSF_4078 53769 - 53557 - | hypothetical protein YPDSF_4079 54104 - 53769 - | hypothetical protein YPDSF_4152 54280 - 54101 - | hypothetical protein YPDSF_4080 54596 - 54321 - | hypothetical protein YPDSF_4081 55074 - 54664 - | hypothetical protein YPDSF_4082 55429 - 55058 - | hypothetical protein TERM 79 55457 - 55469 + r 75 -5.5 -4.8622 | TCTTTCAGAAATTGC GTGGC GTT GTCAC TTTTTACTTCAACGG TERM 80 55546 - 55565 + r 74 -9.2 -3.24232 | opp_overlap 55547, overlap 55544 55542 55547 ATACGGAAATAAAAA AGGCGTCC AAGT GGACGCCG TATCTTTGAAAAGGG TERM 81 55564 - 55547 - R 100 -12.7 -5.65927 | opp_overlap 55546 55544 55542 55547 TACGGAAATAAAAAA GGCGTCC AAGT GGACGCC GTATCTTTGAAAAGG TERM 82 55547 - 55564 + r 86 -12.7 -2.54325 | opp_overlap 55547, overlap 55546 55544 55542 TACGGAAATAAAAAA GGCGTCC AAGT GGACGCC GTATCTTTGAAAAGG YPDSF_4083 56413 - 55583 - | lipoprotein YPDSF_4153 56617 - 56417 - | hypothetical protein TERM 83 56701 - 56685 - R 100 -15.1 -4.98255 | opp_overlap 56674 56685 TTTCAAGTATAAAAA GGCGCCC AAT GGGCGCC TTGTGATTACGCTTC TERM 84 56685 - 56701 + r 100 -15.1 -3.52539 | opp_overlap 56685, overlap 56674 TTTCAAGTATAAAAA GGCGCCC AAT GGGCGCC TTGTGATTACGCTTC YPDSF_4084 57784 - 56708 - | recombinase TERM 85 57723 - 57738 + g 80 -3.2 -5.26119 | GAGACCTTCTGAATC TCGTCA TTGC TGCCGA TTTTCTTTTTCAGCG YPDSF_4085 58053 - 57787 - | hypothetical protein YPDSF_4086 58997 - 58053 - | exonuclease TERM 86 59041 - 59018 - R 100 -15.4 -4.57073 | opp_overlap 59022 CACTCCTTCCAAAAA GTAAGGCGTC CGTA GACGCCTTAC TGGTCACGTTATGGG TERM 87 59022 - 59037 + r 77 -10.4 -3.22223 | opp_overlap 59018 CCTTCCAAAAAGTAA GGCGTC CGTA GACGCC TTACTGGTCACGTTA YPDSF_4087 60086 - 59058 - | hypothetical protein YPDSF_4088 60679 - 60206 - | hypothetical protein TERM 88 61117 - 61134 + H 83 -9.1 -4.1552 | overlap 61133 AAAAATAGTAGTTAG TGGCGGT TTTG GCCGCCA TTTGTTCCAAAGGTA YPDSF_4089 61182 - 61745 + | hypothetical protein TERM 89 61744 - 61773 + T 100 -15.1 -3.91473 | opp_overlap 61751, overlap 61751 ACGCCGAATGCGCAT GAAAAAACCCGCC GATT GGCGGGTTTTTGC TTTATGCGACTTTCT TERM 90 61766 - 61751 - T 100 -11.8 -5.14965 | opp_overlap 61751 61744 ATGCGCATGAAAAAA CCCGCC GATT GGCGGG TTTTTGCTTTATGCG TERM 91 61751 - 61766 + T 100 -11.8 -5.04601 | opp_overlap 61751, overlap 61744 ATGCGCATGAAAAAA CCCGCC GATT GGCGGG TTTTTGCTTTATGCG YPDSF_4090 62218 - 61775 - | hypothetical protein YPDSF_4091 65739 - 62215 - | DNA polymerase III TERM 92 65662 - 65677 + g 70 -4.6 -4.67635 | GTAGCCAGCGTCTCT CGCGAT TTTC ACCGCG TTTTCTGCTTTTAGA TERM 93 65694 - 65717 + g 73 -10.4 -3.31144 | gap 1, opp_overlap 65713, overlap 65716 TTTCTGCTTTTAGAG CTGAC-TCTCC CAG GGAGAAGTCAG TTCTGACCATCAGAG YPDSF_4092 67155 - 65920 - | porphyrin biosynthetic protein YPDSF_4093 69618 - 67252 - | porphyrin biosynthetic protein TERM 94 69320 - 69288 - G 80 -4.8 -5.06414 | gap 1, opp_overlap 69309, overlap 69309 69310 TGCGTTCAATAAAAA CGTCTTCCAGCGCGT TCCA AAGC-CCGGTAGACG GAGCCTTTCCTCTCT TERM 95 69671 - 69705 + r 80 -10.1 -3.6682 | overlap 69672 TGTGTGTAATTTTAT GCTGTACGAACAGGT GGCCA AGCTGTTCGTACAGG TTTCAATAGGTAGGA TERM 96 69672 - 69704 + r 93 -13.6 -2.79878 | overlap 69671 GTGTGTAATTTTATG CTGTACGAACAGGT GGCCA AGCTGTTCGTACAG GTTTCAATAGGTAGG YPDSF_4094 69940 - 69728 - | hypothetical protein YPDSF_4096 70203 - 70589 + | hypothetical protein YPDSF_4095 71687 - 70584 - | integrase TERM 97 71815 - 71787 - R 89 -11.9 -3.28712 | opp_overlap 71787 GCCTGTTTTGTACAA TGATTCCATACTT AAT AGGTATGGAATCA TTTTTACCGGCTATG TERM 98 71787 - 71815 + r 100 -14.1 -4.59109 | opp_overlap 71787 GCCTGTTTTGTACAA TGATTCCATACTT AAT AGGTATGGAATCA TTTTTACCGGCTATG TERM 99 71889 - 71877 - R 93 -2.6 -5.99154 | TACCAAATAAAAAAA CCCC GGGGT GAGG GCAAAGGCTGCTTTG TERM 100 72428 - 72399 - R 84 -10.8 -3.58879 | opp_overlap 72400 72404, overlap 72400 72404 GATAATTCATAAATA TTAAAGGAGGGC ATAATA GCCCTCCTTTAT CTATTATCTATATGG TERM 101 72427 - 72400 - R 95 -14.3 -2.74604 | opp_overlap 72400 72404, overlap 72399 72404 ATAATTCATAAATAT TAAAGGAGGGC ATAATA GCCCTCCTTTA TCTATTATCTATATG TERM 102 72400 - 72427 + r 100 -14.3 -3.26387 | opp_overlap 72399 72400 72404, overlap 72404 ATAATTCATAAATAT TAAAGGAGGGC ATAATA GCCCTCCTTTA TCTATTATCTATATG TERM 103 72423 - 72404 - R 90 -10.7 -4.04579 | opp_overlap 72404 72400, overlap 72400 72399 TTCATAAATATTAAA GGAGGGC ATAATA GCCCTCC TTTATCTATTATCTA TERM 104 72404 - 72423 + r 100 -10.7 -4.26393 | opp_overlap 72400 72399 72404, overlap 72400 TTCATAAATATTAAA GGAGGGC ATAATA GCCCTCC TTTATCTATTATCTA YPDSF_4154 72957 - 72445 - | F1 capsule antigen TERM 105 72557 - 72536 - G 79 -6.6 -4.69214 | overlap 72556 GAGCGAACAAAGAAA TCCTGGCT GCCCGT AGCCAAGA CGACGTCATCCCCCA YPDSF_4097 75539 - 73038 - | F1 capsule anchoring protein TERM 106 74249 - 74273 + g 100 -5 -6.32017 | gap 1, opp_overlap 74252 AGTACTTATTATATC GAACGC-GCCA ACGT TGGCCGCTTTC TTTTTTTTGTTTATT TERM 107 75208 - 75218 + g 73 -5.4 -4.67982 | overlap 75214 AAATCAACACATTGC TCTG TAC CAGA TTTTATTAAATCAGG YPDSF_4098 76340 - 75564 - | F1 chaperone protein TERM 108 76093 - 76106 + g 83 -3.1 -5.50774 | GGAGTGACCACGAAA GGATC CTCT GATTC TTTTTCTTTATTCTC YPDSF_4155 76650 - 77573 + | F1 operon positive regulatory protein YPDSF_4099 78394 - 78089 - | C-type natriuretic protein TERM 109 78516 - 78496 - R 93 -12.5 -3.17797 | GCGACAGATACTGAA GCCGAGGGC CAC GCCCCCAGC AAAAGATAATGTGAT YPDSF_4100 78755 - 78540 - | hypothetical protein YPDSF_4101 80237 - 78915 - | DNA ligase TERM 110 79620 - 79643 + g 86 -13.8 -3.62096 | opp_overlap 79612 79613 CTTGAAACCGGAGAG CCGGCCACGC TCCA GCATGGCCGG TTTAAGGTGATCGAG TERM 111 80066 - 80078 + g 79 -9.1 -4.14257 | GTACGGACGTATCGA GTGGC TCG GCCAC TTTGTACTTCTTCAC TERM 112 80177 - 80191 + g 76 -5.6 -4.85599 | overlap 80163 GCGCCTCTTTCTTGG CGTTGG TTC CCATCG TTTTTATGGCATCCA YPDSF_4102 80748 - 80272 - | hypothetical protein TERM 113 80811 - 80797 - R 100 -8.5 -5.0538 | GCGCAGTTTAAAAAA GCCCC ACCAG GGGGC TAAATGGTTTATCGA YPDSF_4103 81624 - 80830 - | hypothetical protein YPDSF_4156 81877 - 82599 + | hypothetical protein TERM 114 83815 - 83836 + G 77 -10.1 -3.74693 | TTTATTATCGAGTTC GGTGACCGC CTGA GCGATCACC TTTAATACGGTGGCA YPDSF_4104 82633 - 83841 + | transposase YPDSF_4105 86781 - 83962 - | conjugal transfer mating pair stabilization protein TraG YPDSF_4106 88154 - 86781 - | conjugal transfer pilus assembly protein TraH TERM 115 87108 - 87092 - G 78 -10.1 -3.86346 | overlap 87093 CGAGGCTGTTAGAAA CCCCCAG CAT CTGGGGA TCAACCAGGTACTTG TERM 116 87107 - 87093 - G 73 -11.4 -2.91593 | overlap 87092 GAGGCTGTTAGAAAC CCCCAG CAT CTGGGG ATCAACCAGGTACTT TERM 117 87893 - 87906 + g 70 -9.5 -3.25823 | opp_overlap 87882 GATAGGCATCGATAC CGCCG CAGC CGGCG TTGATGTCGGGCAGC YPDSF_4107 88696 - 88151 - | conjugal transfer protein TrbB YPDSF_4108 88934 - 88686 - | conjugal transfer pilin chaperone TraQ YPDSF_4109 89700 - 88951 - | conjugal pilus assembly protein TraF TERM 118 89267 - 89279 + g 70 -9.1 -3.64703 | opp_overlap 89257 AACATCACGCCATAG CGCTG TGC CAGCG TTTCAATGGCGAGGC TERM 119 89675 - 89655 - G 86 -6.8 -5.00616 | opp_overlap 89670 89671, overlap 89656 89668 89670 CTGTGGCGGAAAAAA CGCTGCCA AGAAG CAGCAGCG CTAACGCTGTCTTTC TERM 120 89671 - 89684 + g 72 -8.1 -3.87576 | opp_overlap 89655 89668 89670, overlap 89670 GCTGCCAAGAAGCAG CAGCG CTAA CGCTG TCTTTCTCTTTTTCA TERM 121 89823 - 89812 - R 75 -2.2 -5.252 | CAGCGCCATAAAAAA CACA TCTA TGCG CGATGTTTCATCAAC YPDSF_4110 91801 - 89951 - | conjugal transfer mating pair stabilization protein TraN YPDSF_4111 92568 - 91798 - | conjugative transfer protein TERM 122 92025 - 92039 + gr 88 -9.2 -4.39889 | opp_overlap 92017 92016 GAACAAGCGCCATCA CGGCGG TTG CCGTCG TTTTCATGTCGTTGT TERM 123 92249 - 92284 + gr 100 -15.4 -3.4072 | gap 1, opp_overlap 92241 92240 GAAAGAGGGTTCTGG CGCACCTGCTGCTCCAG AAT CTGGCGCAGC-GGCGCG TTGTCCTGCCCCCTC TERM 124 92410 - 92383 - GR 70 -9.2 -2.75074 | gap 1 CGCAGTGCAACAGTA TGCTGACAGCAGC AGC GCCGCCGTCAG-A CTGGACAGAGTTTTC YPDSF_4112 93382 - 92444 - | conjugal transfer pilus assembly protein TraU YPDSF_4113 94080 - 93433 - | conjugal transfer pilus assembly protein TraW YPDSF_4114 94427 - 94080 - | conjugative transfer protein YPDSF_4115 97054 - 94424 - | conjugal transfer ATP-binding protein TraC TERM 125 94479 - 94489 + g 86 -6.8 -5.00616 | overlap 94469 TCCAGCGCGGCCATT TCCG GCC CGGA TTTTTTCCACGCCAG TERM 126 96501 - 96443 - G 79 -13.1 -3.16742 | gap 2, opp_overlap 96443 96444 96445, overlap 96447 CGCAATGCGGATGAA GGCATCCGCGTCCACGCTGCGGGTGGC TATCTGC GCCCCCTGCAGCGAGG-CGCGGATGA- TTTTGACCTGGTTTT TERM 127 96444 - 96501 + g 100 -21.3 -4.18697 | gap 1, opp_overlap 96443 96447, overlap 96443 96445 GCAATGCGGATGAAG GCATCCGCGTCCACGCTGCGGGTGGC TATCTGC GCCCCCTGCAGCGAGG-CGCGGATGA TTTTGACCTGGTTTT TERM 128 96445 - 96500 + g 100 -24.8 -3.10134 | gap 1, opp_overlap 96443 96447, overlap 96443 96444 CAATGCGGATGAAGG CATCCGCGTCCACGCTGCGGGTGGC TATCTGC GCCCCCTGCAGCGAGG-CGCGGATG ATTTTGACCTGGTTT TERM 129 96498 - 96447 - G 100 -19.4 -2.56715 | gap 1, opp_overlap 96443 96445 96444, overlap 96443 ATGCGGATGAAGGCA TCCGCGTCCACGCTGCGGGTGGC TATCTGC GCCCCCTGCAGCGAGG-CGCGGA TGATTTTGACCTGGT YPDSF_4116 97613 - 97047 - | conjugal transfer protein TraP TERM 130 97150 - 97138 - G 71 -6.9 -4.19258 | overlap 97139 ATACCGTAGCGAAAA CGCGC TGA GCGCA TCTGACCGTACAGGC TERM 131 97844 - 97868 + r 72 -9.9 -2.78596 | opp_overlap 97839 TGTTGAGAAATCCCA GCCTTCCCGTC TAG GGCGGGAGCGC TCTGCTGAGACGCTG YPDSF_4117 99063 - 98524 - | conjugal transfer protein TraV TERM 132 98589 - 98572 - G 100 -6.9 -5.55769 | TTTCACAACAAAAAA CACCCGC GTCG GCTGGTG ATAAACGTCCTGCGT YPDSF_4118 100479 - 99085 - | conjugal transfer pilus assembly protein TraB YPDSF_4119 101209 - 100466 - | conjugal transfer protein TraK YPDSF_4120 101762 - 101196 - | conjugal transfer pilus assembly protein TraE YPDSF_4121 102082 - 101777 - | conjugal transfer pilus assembly protein TraL YPDSF_4122 102583 - 102233 - | conjugal transfer pilin subunit TraA TERM 133 102482 - 102467 - G 100 -10.4 -4.65895 | overlap 102452 102476 CGTTTCAGGGAAAAA CGCAGC AAGG GCTGCG ACAGGCAGGGCAAAC TERM 134 102819 - 102798 - R 84 -10.1 -3.74693 | TGCCACCGTATTAAA GGTGATCGC TCAG GCGGTCACC GAACTCGATAATAAA YPDSF_4123 104001 - 102793 - | transposase TERM 135 105966 - 105934 - g 80 -13.3 -2.87132 | CCCGCGCTGCAGACA CCGCATCCGCTTCGG CAT CCGTAGCGGGTGCCG CAGGCACTGGCGGCG YPDSF_4124 104025 - 106193 + | conjugal transfer protein TraD TERM 136 107297 - 107287 - g 86 -5.4 -5.24129 | overlap 107291 TGCGGCGATAAAAAA TGAG CAG CTCA TCCCGCTGGATAAAG TERM 137 108615 - 108599 - g 87 -7.9 -5.03715 | opp_overlap 108609 ACCACGTTGAAAAAA CTGGCGC TCA GCGGCAG GGCGGTGCAGCTCTA TERM 138 108753 - 108709 - g 70 -9.9 -3.21912 | GTCTGAACTGATTAA TGATGCGGCGGGGCATGACAG GCT CGATGATGCCCTGGCGCACCA GAAGGCCGGGCTGCA TERM 139 109375 - 109387 + G 71 -7.7 -3.97947 | CGAACGACCGGACTT CAGCA ACG TGCTG TTTCTCGTGGATGAA YPDSF_4125 106193 - 111433 + | conjugal transfer nickase/helicase TraI YPDSF_4126 111435 - 112172 + | conjugative transfer fimbrial acetylation protein YPDSF_4127 112239 - 112958 + | conjugal transfer fertility inhibition protein FinO YPDSF_4128 112951 - 113742 + | hypothetical protein TERM 140 113763 - 113740 - f 73 -2.5 -5.21709 | gap 1, overlap 113743 GGTGATACCAAAAAA TAATCAGGCG TCCGC CACCTGAT-A CCGCTAAAAGAGACT TERM 141 113761 - 113743 - f 79 -6.7 -4.69962 | overlap 113740 GATACCAAAAAATAA TCAGGCG TCCGC CACCTGA TACCGCTAAAAGAGA TERM 142 113807 - 113847 + F 100 -12.6 -4.05446 | opp_overlap 113817 TGCTCAGTTGTCCAA CCCCGGAGAAGGGTAAAA GCAAG TTTTCCCCGTCTCCGGCG TTTCTGGTTAACACA YPDSF_4129 113890 - 114444 + | endonuclease TERM 143 114733 - 114686 - f 95 -7.7 -5.1417 | CCAGAAAAGCAAAAA CCCCGATAATCTTCACCAGGT TTGGCG ACTAAGAGAAGATTAACGGGG CCTACTTAAACTGTA YPDSF_4130 114854 - 115717 + | replication protein TERM 144 115751 - 115736 - f 100 -10.4 -4.56597 | opp_overlap 115734 TTCCTGTGTGAAAAA TCCGGC TGGC GCCGGA GGGTTTCGCACGTCT YPDSF_4131 116924 - 117946 + | transposase YPDSF_4132 118432 - 118145 - | hypothetical protein YPDSF_4157 118515 - 118715 + | transposase TERM 145 119459 - 119444 - g 70 -8.2 -3.74251 | CACACTTGCATCAAA GGGGGC GCAT ACCCCC GGCGTTGATGGTGTG YPDSF_4133 119322 - 119777 + | hypothetical protein TERM 146 119974 - 119951 - T 71 -8.2 -3.52909 | opp_overlap 119945 119951, overlap 119943 119945 AAACAGAGATGATAA CCATCATGAT TATT AGCATGATGG TTTATGTGATTTATG TERM 147 119951 - 119974 + T 79 -8.2 -4.19123 | opp_overlap 119943 119945 119951, overlap 119945 AAACAGAGATGATAA CCATCATGAT TATT AGCATGATGG TTTATGTGATTTATG YPDSF_4134 121785 - 120022 - | toxin YPDSF_4135 122351 - 121863 - | hypothetical protein YPDSF_4136 123090 - 123365 + | hypothetical protein TERM 148 123359 - 123378 + T 93 -12.2 -3.72241 | opp_overlap 123359 123354 ACATGAGAAAGAGAA CGACTAGC GAGC GCTAGTCG TTTAAATGATTAGTG TERM 149 123378 - 123359 - T 100 -12.2 -3.92485 | opp_overlap 123359, overlap 123354 ACATGAGAAAGAGAA CGACTAGC GAGC GCTAGTCG TTTAAATGATTAGTG YPDSF_4137 124329 - 123388 - | hypothetical protein YPDSF_4138 125015 - 124395 - | resolvase YPDSF_4139 125768 - 125541 - | hypothetical protein YPDSF_4140 126070 - 127275 + | partitioning protein A TERM 150 127803 - 127784 - g 70 -2.8 -4.86731 | TGCGTTGAAAGAAAA TCTCTCTC CGGC GAAAGTGA CACGTGCGTTTCAGG TERM 151 128235 - 128208 - g 73 -5.6 -4.73635 | overlap 128209 128212 GATAAGGCAATAAAA CGTATTCTGGAA AGAC TTCCAGAATCAG GTGAGTAAGGGATAA YPDSF_4141 127272 - 128243 + | partitioning protein B TERM 152 128251 - 128268 + T 91 -7 -5.53079 | opp_overlap 128251 GTGAGTAAGGGATAA GGATGC CGAAGA GCATCC TTTTTTGTATGTTTT YPDSF_4158 128526 - 128380 - | hypothetical protein YPDSF_4142 128628 - 130019 + | DNA-binding protein YPDSF_4159 130489 - 130181 - | hypothetical protein YPDSF_4143 130882 - 131559 + | putative methylase TERM 153 131603 - 131583 - g 72 -4 -4.82667 | gap 1, overlap 131576 131584 131596 GCAGGACACGAAAAA CTCCGCGCA GAAG TG-GCGGAA GTAGCCAACAGCATG YPDSF_4144 131559 - 131780 + | hypothetical protein YPDSF_4145 131791 - 132210 + | hypothetical protein TERM 154 132247 - 132208 - f 73 -2.9 -5.1101 | gap 2, opp_overlap 132219, overlap 132213 132217 GCATTACTGAAAAAA TGAAATCA--ACACGCCGC CCGG GCGGCGTGTACTGACCCCG TTCAGAGGAACCCAT TERM 155 132242 - 132213 - f 82 -8 -4.43669 | gap 2, opp_overlap 132219, overlap 132208 132217 ACTGAAAAAATGAAA TCA--ACACGCCGC CCGG GCGGCGTGTACTGA CCCCGTTCAGAGGAA TERM 156 132236 - 132217 - f 100 -15 -3.7256 | opp_overlap 132219, overlap 132213 132208 AAAAAATGAAATCAA CACGCCGC CCGG GCGGCGTG TACTGACCCCGTTCA TERM 157 132219 - 132234 + F 83 -11.8 -2.78715 | opp_overlap 132217 132213 132208 AAAATGAAATCAACA CGCCGC CCGG GCGGCG TGTACTGACCCCGTT YPDSF_4146 132264 - 133043 + | hypothetical protein TERM 158 133071 - 133050 - f 84 -11.5 -3.09327 | overlap 133053 CCAGTGTAGCGAACA GCAGGGGGC GGCG GCCCCCTGA ATCTACCACGAAGGA TERM 159 133068 - 133053 - f 83 -11.8 -2.75992 | overlap 133050 GTGTAGCGAACAGCA GGGGGC GGCG GCCCCC TGAATCTACCACGAA YPDSF_4147 133442 - 133948 + | antirestriction protein TERM 160 134019 - 133995 - f 100 -11.3 -4.07687 | overlap 133996 AGCCCGCGCGCAAAA CCCTGGCAGGC TCT GCCTGCCGGCG AAGTACGCCGCGCCT TERM 161 134017 - 133996 - f 93 -12.3 -3.04398 | gap 1, overlap 133995 GCCCGCGCGCAAAAC CCTGGCAGGC TCT GCCTGCC-GG CGAAGTACGCCGCGC TERM 162 134025 - 134045 + F 95 -13.9 -2.87564 | opp_overlap 134025 CCTGCCGGCGAAGTA CGCCGCGCC TGC GGCGCCGCG TATCTCCGCCAGTGC TERM 163 134045 - 134025 - f 95 -13.9 -2.70932 | opp_overlap 134025 CCTGCCGGCGAAGTA CGCCGCGCC TGC GGCGCCGCG TATCTCCGCCAGTGC TERM 164 134289 - 134268 - f 89 -11.5 -3.53012 | CGGCGCTGTCGTAAA CGGAGCCGG TAAA CCGTCTCCG CCCTGTCGGGCTTCC TERM 165 134370 - 134392 + F 100 -14.8 -3.61398 | GCGCCGCTCTCACCA GCCCGGCGGT AAT GCTGCCGGGC TTCTTCGGGGCAACG YPDSF_4148 134661 - 134891 + | hypothetical protein TERM 166 134930 - 134899 - f 70 -9.5 -2.82942 | gap 2, overlap 134898 CGCAGTAAGAAAGAG GTGCCCTGCCGGAGC GCGA ACTCCG-CAGGGC-C AGACAATCATCAATA YPDSF_4149 134964 - 136973 + | DNA-binding protein SEQUENCE gi|145597324|ref|NC_009381.1| Yersinia pestis Pestoides F, complete genome (length 4517345) dnaA 34 - 1422 + | chromosomal replication initiation protein YPDSF_0002 1427 - 2527 + | DNA polymerase III subunit beta TERM 1 3079 - 3100 + G 76 -4.3 -5.0538 | opp_overlap 3078 TTACGTTATTAAATG GCGGGCC AAAATTCC GGCGCGC TTTTTTAGACTGGGG TERM 2 3195 - 3176 - g 74 -11.4 -3.10082 | opp_overlap 3171, overlap 3179 AAAAAGGTTACTCAA GCAGCGCA ACGC CGCGCTGC GCCAGGTTAGTCGCT TERM 3 3197 - 3179 - g 74 -12.4 -2.7556 | opp_overlap 3171, overlap 3176 AAGGTTACTCAAGCA GCGCAACG CCG CGCTGCGC CAGGTTAGTCGCTAT TERM 4 3470 - 3459 - g 71 -7.2 -4.03234 | GTTGGGCCACATAAA GCGG ATTT CCGC ATTCGGGCCGATGGT recF 2502 - 3779 + | recombination protein F gyrB 3805 - 6219 + | DNA gyrase subunit B TERM 5 6256 - 6283 + F 93 -4.1 -5.81412 | gap 1 TGGCCAGATAAAAAA GTCCAG-GGTGG GAAAA CTGCCACTGGGC TTTTTTTTGCCTGAA YPDSF_0005 6435 - 7244 + | sugar phosphatase TERM 6 7581 - 7603 + T 71 -9 -3.32844 | CGATAGTGCGAAAGC GCGGGGTTCC AAG GGGGCCACGC TTATGCACTGAACCC TERM 7 7657 - 7675 + T 77 -11 -2.73735 | overlap 7650 7667 7669 TGCTTTTCTACCTGA GTCCGGTA TTC TGCCGGAC TCATTCCGCCTGTTT YPDSF_0006 8423 - 7638 - | transposase for insertion sequence IS1661 TERM 8 8992 - 9048 + r 78 -10.3 -3.30159 | gap 1, opp_overlap 8997 9002 9023, overlap 8993 9003 AAAAAGGGTGTTTCA TTGAACCGAACCTCCAGATCATGGAT AAAAAG ATCCAAGATCTGG-GGTTCAGTGCAC TTATGGCCCCATTGG TERM 9 8993 - 9047 + r 95 -13.8 -2.57881 | gap 1, opp_overlap 8997 9002 9023, overlap 8992 9003 AAAAGGGTGTTTCAT TGAACCGAACCTCCAGATCATGGAT AAAAAG ATCCAAGATCTGG-GGTTCAGTGCA CTTATGGCCCCATTG TERM 10 9043 - 8997 - R 100 -15.4 -3.05384 | gap 1, opp_overlap 8993 8992 9003, overlap 9002 9023 GGGTGTTTCATTGAA CCGAACCTCCAGATCATGGAT AAAAAG ATCCAAGATCTGG-GGTTCAG TGCACTTATGGCCCC TERM 11 9038 - 9002 - R 77 -10.3 -3.19192 | gap 1, opp_overlap 8993 8992 9003, overlap 8997 9023 TTTCATTGAACCGAA CCTCCAGATCATGGAT AAAAAG ATCCAAGATCTGG-GG TTCAGTGCACTTATG TERM 12 9003 - 9038 + r 93 -12.7 -3.08471 | opp_overlap 9002 8997 9023, overlap 8993 8992 TTCATTGAACCGAAC CTCCAGATCATGGAT AAAAAG ATCCAAGATCTGGGG TTCAGTGCACTTATG TERM 13 9033 - 9023 - R 75 -5.4 -4.88736 | opp_overlap 9003 8993 8992, overlap 9002 8997 GATCATGGATAAAAA GATC CAA GATC TGGGGTTCAGTGCAC YPDSF_0007 10152 - 9199 - | ornithine cyclodeaminase YPDSF_0008 11108 - 10146 - | hypothetical protein TERM 14 11346 - 11333 - g 80 -2.3 -5.43866 | GAATGCGCAAAAAAA CCGTT TCTT ACCGG AACAGCAGCTTACCT YPDSF_0009 11316 - 11627 + | hypothetical protein YPDSF_0010 11617 - 11931 + | hypothetical protein YPDSF_0011 12309 - 11971 - | hypothetical protein TERM 15 12160 - 12195 + g 71 -10.6 -3.05596 | gap 1, overlap 12165 GGGGCGTAGTGCCCA GCCGGTATCGTCAT-CT TTG AGCATGGCGATATTGGC TTCGGTGCCAGAGTA TERM 16 12501 - 12513 + H 77 -3.5 -5.23316 | opp_overlap 12500 ATTTTCCAATACGAT TTTTT GCG AAAAA TTTTTTGATCTCATG YPDSF_0012 12677 - 13090 + | heat shock protein IbpA YPDSF_0013 13371 - 13835 + | heat shock chaperone IbpB TERM 17 14001 - 14032 + F 100 -10.2 -4.41548 | overlap 14003 TCCCTTGTTTGTCTT TTCACCGGAGAG ATTCCCCG CTCTCCGGTGCA TTTTGTGGCGTATCC TERM 18 14003 - 14030 + F 90 -12.8 -2.54186 | overlap 14001 CCTTGTTTGTCTTTT CACCGGAGAG ATTCCCCG CTCTCCGGTG CATTTTGTGGCGTAT YPDSF_0014 14208 - 15866 + | hypothetical protein TERM 19 15894 - 15918 + T 100 -12.9 -4.23674 | opp_overlap 15892 15891 CGGGCTATTAAACTT CAGGGCAGC GTAATTG GCTGCCCTG TTTGTATTGGTGAAG avtA 17349 - 15979 - | valine--pyruvate transaminase TERM 20 17409 - 17399 - R 91 -5.4 -5.59502 | TAAAAAAGTAAAAAA CCAT GAA ATGG CAAGAGGAGAGAATT malS 20620 - 18557 - | periplasmic alpha-amylase precursor TERM 21 20681 - 20715 + r 71 -4.2 -4.82901 | GGCAGATTCAGTGTG CCGCTTGGCGAAGA AATAGCC TCATCCCTGAGCGG TTTTTGTAGGGAGGA TERM 22 20888 - 20855 - R 76 -9.7 -3.35597 | overlap 20853 TTGACCTGCCAAACA TCTATTGACCCGC TAAACAGG GCAGGCCAATAGA ATTGACGGGCGGATG YPDSF_0017 21889 - 20909 - | D-isomer specific 2-hydroxyacid dehydrogenase YPDSF_0018 22408 - 23052 + | hypothetical protein TERM 23 23097 - 23125 + T 72 -7.6 -3.80133 | gap 2, opp_overlap 23112, overlap 23094 GAAAATGGGGAGCAG TGCGGATAA-G-CC AAA GGACATTATCCGCA TGTTTTATCACGGTG YPDSF_0019 23842 - 23183 - | putative outer membrane lipoprotein YPDSF_0020 24655 - 24200 - | hypothetical protein YPDSF_0021 25224 - 24652 - | DNA-3-methyladenine glycosylase TERM 24 25049 - 25062 + g 70 -2.3 -5.00884 | overlap 25060 TGATGGAAGCTTTTG CGGTA ATGC TCCCG TTTTTTGAGCACGGT glyQ 25552 - 26466 + | glycyl-tRNA synthetase subunit alpha TERM 25 28113 - 28151 + G 74 -7.6 -4.25283 | gap 2, opp_overlap 28112 TAGCGTCGATACCAT TCAGGCGGTCTTGGCTCG TCGTC CGA-CCAA-ACCGGCTGA TTTTGATGCGCGAGT glyS 26476 - 28545 + | glycyl-tRNA synthetase subunit beta TERM 26 28594 - 28576 - f 90 -11.7 -3.61398 | CGTGCTGGGCAATAA GGGGAGC TATAC GCTCCCC TTCAGACTGCTGACA TERM 27 28685 - 28659 - f 72 -10.1 -2.88849 | gap 1, opp_overlap 28667, overlap 28658 28674 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGTTCG AGCCTACATGGATGT TERM 28 28753 - 28792 + F 85 -7.3 -4.87786 | gap 1, opp_overlap 28758 28759, overlap 28755 28759 28764 CGCGGGCACTTTGTC AATAACCTCAAGGGGAGC TATAC GCTCCCCTT-ACGTTATG TTTTTGTGGGGTTAG TERM 29 28755 - 28790 + F 86 -9.9 -4.05669 | gap 1, opp_overlap 28758 28759, overlap 28753 28759 28764 CGGGCACTTTGTCAA TAACCTCAAGGGGAGC TATAC GCTCCCCTT-ACGTTA TGTTTTTGTGGGGTT TERM 30 28787 - 28759 - f 77 -11 -2.77013 | opp_overlap 28755 28753 28759 28764, overlap 28758 CACTTTGTCAATAAC CTCAAGGGGAGC TATAC GCTCCCCTTACG TTATGTTTTTGTGGG TERM 31 28759 - 28787 + F 83 -8.8 -4.13816 | opp_overlap 28759 28758, overlap 28755 28753 28764 CACTTTGTCAATAAC CTCAAGGGGAGC TATAC GCTCCCCTTACG TTATGTTTTTGTGGG TERM 32 28764 - 28782 + F 86 -11.7 -3.33845 | opp_overlap 28759 28758, overlap 28759 28755 28753 TGTCAATAACCTCAA GGGGAGC TATAC GCTCCCC TTACGTTATGTTTTT YPDSF_0024 29018 - 29737 + | hypothetical protein TERM 33 29861 - 29835 - f 84 -10.1 -3.82218 | gap 1, opp_overlap 29844, overlap 29836 29851 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 34 29862 - 29836 - f 72 -10.1 -2.88849 | gap 1, opp_overlap 29844, overlap 29835 29851 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT TERM 35 29938 - 29957 + F 100 -11.4 -4.44914 | opp_overlap 29936 CTTTGTCAATAACCT CAGGGGCC TTTT GGTCCCTG TTATTTTCTTACATA TERM 36 30050 - 30065 + F 74 -7.6 -4.07568 | opp_overlap 30049 30045 30050 CGAGCAAAAATAACT TGTGAC AAAT GTCACA TTTTAAAAACAAACA TERM 37 30217 - 30229 + F 72 -6.3 -4.26903 | GTTGTTTTGTGTGAC TTTCG TCA CGAAA TTTTCGTGAGCTACG TERM 38 30350 - 30382 + F 71 -4.2 -4.89567 | AAAATAATTATATCG CGCTCTTATTGTTA GCGCG TACCAATAGGGGTG TTTTATGTTTTCACC YPDSF_0025 30387 - 32318 + | PTS system, mannitol-specific IIABC component YPDSF_0026 32455 - 33618 + | mannitol-1-phosphate 5-dehydrogenase TERM 39 33644 - 33681 + F 73 -9.1 -3.54424 | overlap 33645 33647 TAAGCCAGCTATGTC CCATTGGCCTGATAACG GAAA CGATAGCGGGCCAATGA TTTAAGACACTAAAG TERM 40 33645 - 33680 + F 88 -12.6 -2.72511 | overlap 33644 33647 AAGCCAGCTATGTCC CATTGGCCTGATAACG GAAA CGATAGCGGGCCAATG ATTTAAGACACTAAA TERM 41 33647 - 33678 + F 71 -9.4 -2.90813 | overlap 33645 33644 GCCAGCTATGTCCCA TTGGCCTGATAACG GAAA CGATAGCGGGCCAA TGATTTAAGACACTA mtlR 33825 - 34379 + | mannitol repressor protein TERM 42 34777 - 34754 - g 82 -7.4 -4.66456 | gap 1, overlap 34756 34767 AAAGAAAAAGAGAAA CTGGCCGCTGA AAT TCAGC-GCCTG AAAGAAGTACGGGTA TERM 43 34809 - 34798 - g 70 -2.2 -5.03715 | AGTACGGGTAAAAAA CCTG AGTG CAGA AGCTCAAAAACTGGC YPDSF_0028 34628 - 34984 + | hypothetical protein TERM 44 34988 - 34976 - T 71 -3.3 -5.0538 | opp_overlap 34966 GGCTACGCTAAAAAA GCGTT TTG ATCGC CGCTTTGCGGTAACC TERM 45 35003 - 35030 + T 80 -10.5 -3.56375 | overlap 35002 34999 34995 35005 CCGCTTTGCGGTAAC CTCTGGGTGGC ATGGCC GCCACCCGGTG TGTTGTTCCTTTTGC TERM 46 35005 - 35028 + T 86 -11.7 -3.33839 | overlap 35003 35002 34999 34995 GCTTTGCGGTAACCT CTGGGTGGC ATGGCC GCCACCCGG TGTGTTGTTCCTTTT YPDSF_0029 35629 - 35153 - | hypothetical protein TERM 47 36213 - 36223 + r 70 -2.6 -5.06816 | TGTCTTTTTTTGTAT TTAA CGC TTAA TTTTTCTTGCAAACT TERM 48 36255 - 36265 + r 95 -5.4 -5.88197 | CGTGCTTTGCTACAC GTGA CAT TCAC TTTTTTTCTATTTCA YPDSF_0030 36492 - 36262 - | membrane protein YPDSF_0031 38631 - 36682 - | methyl-accepting chemotaxis protein II TERM 49 38857 - 38889 + r 76 -9.2 -3.50722 | opp_overlap 38861, overlap 38855 38859 38861 GAAACTTTAACAATA AAAATGCCAGCAAG AGGGC CTTGCTGGCATGTA TCTTTCGTACTTGAA TERM 50 38859 - 38887 + r 89 -11.8 -3.32233 | opp_overlap 38861, overlap 38857 38855 38861 AACTTTAACAATAAA AATGCCAGCAAG AGGGC CTTGCTGGCATG TATCTTTCGTACTTG TERM 51 38885 - 38861 - R 100 -15.1 -5.29445 | opp_overlap 38859 38857 38855 38861 CTTTAACAATAAAAA TGCCAGCAAGA GGG CCTTGCTGGCA TGTATCTTTCGTACT TERM 52 38861 - 38885 + r 100 -14.4 -3.21671 | opp_overlap 38861, overlap 38859 38857 38855 CTTTAACAATAAAAA TGCCAGCAAG AGGGC CTTGCTGGCA TGTATCTTTCGTACT TERM 53 38940 - 38957 + r 70 -5.5 -4.42386 | opp_overlap 38940 TCTTTGGCTATGCAA CGGGC GGTTTAAG GCCCG TTTTATGGATAAGCG YPDSF_0032 39598 - 38975 - | superoxide dismutase TERM 54 39777 - 39796 + r 71 -4.9 -4.7416 | overlap 39780 ATAAAATTAATTTAT GATGCGG CGTAAC CCGCTTC TTTTTGACGTTTTAC TERM 55 39780 - 39793 + r 70 -5.2 -4.45259 | overlap 39777 AAATTAATTTATGAT GCGG CGTAAC CCGC TTCTTTTTGACGTTT TERM 56 39976 - 39998 + r 78 -4.2 -5.22312 | TCGCCACTATCGTTA TATCTTTGGT GTC ATCAATGATA TTTTTTGGTGTGGAT YPDSF_0033 40858 - 40034 - | formate dehydrogenase accessory protein TERM 57 40347 - 40384 + g 79 -9.1 -4.18018 | opp_overlap 40334 40333, overlap 40349 ATCCACGCGGCAGCA TGGGTACAGCCGGTGAG TTGA CCGACCGGTTGTACCTG TTTTAGCTGGGCAAG TERM 58 40349 - 40382 + g 85 -11.7 -3.69216 | opp_overlap 40333, overlap 40347 CCACGCGGCAGCATG GGTACAGCCGGTGAG TTGA CCGACCGGTTGTACC TGTTTTAGCTGGGCA YPDSF_0034 41055 - 41642 + | twin-arginine translocation pathway signal TERM 59 42777 - 42759 - g 73 -3 -4.96501 | overlap 42760 42761 42763 CCGGATAAAAACAAA GTGACAGC GGC GCTGTCGA AGCTGAAATTCTTGG YPDSF_0035 41691 - 44102 + | hypothetical protein TERM 60 44771 - 44750 - g 76 -11.6 -3.28712 | opp_overlap 44735, overlap 44734 44735 CCGTGGGTTTGATAA CGCAGGGT TATATG ACCCTGCG GGCGTCGGCGGTACC YPDSF_0036 44115 - 45086 + | formate dehydrogenase-O, iron-sulfur subunit TERM 61 45127 - 45098 - g 100 -7 -5.77571 | overlap 45099 ATGAAAAAAGAAAAA CCGATCCAGCGC TACAGC GCGCCGGAGCGC ATTAACCACTGGATA TERM 62 45126 - 45099 - g 84 -10.5 -4.02882 | overlap 45098 TGAAAAAAGAAAAAC CGATCCAGCGC TACAGC GCGCCGGAGCG CATTAACCACTGGAT TERM 63 45238 - 45283 + G 74 -4.7 -4.81734 | gap 2, overlap 45238 45247 45250 TGGTACACCACAGAT GG-CGCGCAT-TCTTCACCCC TTTGCC GGGGTGGTGATGTTCGCGGCC TTTTTGATCATGTTT YPDSF_0037 45083 - 45757 + | formate dehydrogenase-O subunit gamma TERM 64 45811 - 45838 + G 74 -7.6 -4.12942 | opp_overlap 45799 45812 45815, overlap 45815 CAACGCGAAAAAGGT ACAACGGCGGGG AATA TCCCGCCGTTAC TTTTCGCAAATTTAA TERM 65 45837 - 45812 - g 77 -12.6 -2.85019 | opp_overlap 45811 45815, overlap 45799 45815 AACGCGAAAAAGGTA CAACGGCGGG GAATAT CCCGCCGTTA CTTTTCGCAAATTTA TERM 66 45834 - 45815 - g 82 -12.1 -3.5616 | opp_overlap 45815 45811, overlap 45812 45799 GCGAAAAAGGTACAA CGGCGGG GAATAT CCCGCCG TTACTTTTCGCAAAT TERM 67 45815 - 45834 + G 85 -12.8 -3.67175 | opp_overlap 45812 45799 45815, overlap 45811 GCGAAAAAGGTACAA CGGCGGGG AATA TCCCGCCG TTACTTTTCGCAAAT YPDSF_0038 45757 - 46686 + | formate dehydrogenase accessory protein FdhE YPDSF_0039 46870 - 48258 + | selenocysteine synthase YPDSF_0040 48255 - 50207 + | selenocysteinyl-tRNA-specific translation factor TERM 68 50489 - 50477 - f 87 -6.3 -5.18726 | CCTCCAGAATAAAAA TTGAG TCC CTCAA GGTGCCCGGTACAAC YPDSF_0042 50967 - 51083 + | membrane protein TERM 69 51131 - 51110 - T 84 -10.1 -3.74693 | TGCCACCGTATTAAA GGTGATCGC TCAG GCGGTCACC GAACTCGATAATAAA YPDSF_0043 52313 - 51105 - | transposase for the IS285 insertion element TERM 70 52607 - 52634 + r 78 -9.2 -3.62235 | opp_overlap 52613, overlap 52605 52610 ATATAGATATCTTTC CAATAAGGAGGA ATGA TCCTCCTTGCTG TCTATTTTCTTTCAT TERM 71 52628 - 52613 - R 75 -9 -3.62224 | opp_overlap 52610 52607 52605 ATATCTTTCCAATAA GGAGGA ATGA TCCTCC TTGCTGTCTATTTTC YPDSF_0044 53217 - 52636 - | hypothetical protein YPDSF_0045 53481 - 53296 - | hypothetical protein TERM 72 53922 - 53879 - R 73 -7.4 -4.08394 | overlap 53882 ATAGCGTGGGTAAAA CTATCCTGCTGGAGAAGC TACCTGAC GCTCCTCCAGCAGGGAAT AAACTTACTCGGTAG TERM 73 53919 - 53882 - R 100 -13.5 -3.08032 | overlap 53879 GCGTGGGTAAAACTA TCCTGCTGGAGAAGC TACCTGAC GCTCCTCCAGCAGGG AATAAACTTACTCGG YPDSF_0046 55156 - 53927 - | multidrug translocase TERM 74 55572 - 55594 + r 71 -9 -3.32844 | CGATAGTGCGAAAGC GCGGGGTTCC AAG GGGGCCACGC TTATGCACTGAACCC TERM 75 55648 - 55666 + r 77 -11 -2.73735 | overlap 55641 55658 55660 TGCTTTTCTACCTGA GTCCGGTA TTC TGCCGGAC TCATTCCGCCTGTTT YPDSF_0047 56414 - 55629 - | transposase for insertion sequence IS1661 TERM 76 56983 - 57039 + r 78 -10.3 -3.30159 | gap 1, opp_overlap 56988 56993 57014, overlap 56984 56994 AAAAAGGGTGTTTCA TTGAACCGAACCTCCAGATCATGGAT AAAAAG ATCCAAGATCTGG-GGTTCAGTGCAC TTATGGCCCCCTTGG TERM 77 56984 - 57038 + r 95 -13.8 -2.57881 | gap 1, opp_overlap 56988 56993 57014, overlap 56983 56994 AAAAGGGTGTTTCAT TGAACCGAACCTCCAGATCATGGAT AAAAAG ATCCAAGATCTGG-GGTTCAGTGCA CTTATGGCCCCCTTG TERM 78 57034 - 56988 - R 100 -15.4 -3.05384 | gap 1, opp_overlap 56984 56983 56994, overlap 56993 57014 GGGTGTTTCATTGAA CCGAACCTCCAGATCATGGAT AAAAAG ATCCAAGATCTGG-GGTTCAG TGCACTTATGGCCCC TERM 79 57029 - 56993 - R 77 -10.3 -3.19192 | gap 1, opp_overlap 56984 56983 56994, overlap 56988 57014 TTTCATTGAACCGAA CCTCCAGATCATGGAT AAAAAG ATCCAAGATCTGG-GG TTCAGTGCACTTATG TERM 80 56994 - 57029 + r 93 -12.7 -3.08471 | opp_overlap 56993 56988 57014, overlap 56984 56983 TTCATTGAACCGAAC CTCCAGATCATGGAT AAAAAG ATCCAAGATCTGGGG TTCAGTGCACTTATG TERM 81 57024 - 57014 - R 75 -5.4 -4.88736 | opp_overlap 56994 56984 56983, overlap 56993 56988 GATCATGGATAAAAA GATC CAA GATC TGGGGTTCAGTGCAC YPDSF_0048 57934 - 57176 - | DNA-binding transcriptional repressor GlpR TERM 82 57689 - 57701 + g 76 -6.2 -4.63218 | overlap 57688 GCTAGCAACGCGTTG GGCG ATCCG CGCC TTTTCTTCCGACCAC YPDSF_0049 58805 - 57969 - | intramembrane serine protease GlpG glpE 59152 - 58823 - | thiosulfate sulfurtransferase YPDSF_0051 62238 - 59527 - | transcriptional regulator MalT TERM 83 59794 - 59784 - G 78 -4 -5.14163 | overlap 59774 ATTTATCAACAAAAA TTTC GTC GAAA TGCGCGAATTTATGC TERM 84 59891 - 59909 + g 70 -11 -2.55074 | TTGAGTTGGATCAGT TGGCGCAG TTG TTGCGCCA TGGCTTCACCTTCAA YPDSF_0052 62556 - 64961 + | glycogen/starch/alpha-glucan phosphorylase malQ 64974 - 67070 + | 4-alpha-glucanotransferase YPDSF_0054 67974 - 67399 - | putative DNA uptake protein YPDSF_0055 68735 - 68034 - | gluconate periplasmic binding protein TERM 85 68206 - 68244 + g 78 -13.1 -2.90763 | gap 1, overlap 68211 CGCACGTTCTTTCGC CGCTGTGCCGCCGTCAGC TGCT GTTG-CGGCGGCGTTGCG TGTATACGCTGTAGC TERM 86 68211 - 68239 + g 74 -11 -3.16177 | gap 1, overlap 68206 GTTCTTTCGCCGCTG TGCCGCCGTCAGC TGCT GTTG-CGGCGGCG TTGCGTGTATACGCT YPDSF_0056 68801 - 69598 + | biotin biosynthesis protein YPDSF_0057 69768 - 70037 + | hypothetical protein TERM 87 70175 - 70152 - T 76 -11 -2.50966 | opp_overlap 70153, overlap 70143 70151 70149 70147 ACGGAATCAACATAT TGAGATGCCC ATAT GGGCATCTCT TATTGGTGTGCGTGA TERM 88 70153 - 70174 + T 100 -14.5 -3.78034 | opp_overlap 70143 70152 70151 70149 70147 CGGAATCAACATATT GAGATGCCC ATAT GGGCATCTC TTATTGGTGTGCGTG YPDSF_0058 70432 - 70175 - | hypothetical protein TERM 89 70486 - 70472 - R 74 -10 -3.15579 | opp_overlap 70471 CTAATGGGTGATCAA TGGCAG TTG CTGCCA CTACTTCGGCAGCAA feoB 72783 - 70468 - | ferrous iron transport protein B TERM 90 72351 - 72363 + g 80 -4.7 -5.11613 | opp_overlap 72351 ATACCAATGGAATGA CCGGG CAA CCCAG TTTTTTAGATAATGT feoA 73102 - 72875 - | ferrous iron transport protein A TERM 91 73606 - 73551 - R 100 -29.6 -2.90813 | opp_overlap 73556 73593, overlap 73556 TATTTTGTTAAATTA TTAAACTGCCCTCCTCATTATTGGAT ATCA ATCTAATAATGAGGAGGGCAGTTTAA TGGCCGTCCTTGTCA TERM 92 73601 - 73556 - R 100 -25.1 -3.8901 | opp_overlap 73556 73593, overlap 73551 TGTTAAATTATTAAA CTGCCCTCCTCATTATTGGAT ATCA ATCTAATAATGAGGAGGGCAG TTTAATGGCCGTCCT TERM 93 73556 - 73601 + r 100 -27.3 -3.73953 | opp_overlap 73556 73551, overlap 73593 TGTTAAATTATTAAA CTGCCCTCCTCATTATTGGAT ATCA ATCTAATAATGAGGAGGGCAG TTTAATGGCCGTCCT YPDSF_0061 76001 - 73626 - | hypothetical protein TERM 94 75735 - 75758 + g 73 -5.8 -4.49337 | overlap 75739 TAGGGTGGCGTTGAT CGCCCCGGCC AGCT GGTCGGTGAG TTTTCCTTGATCTTC TERM 95 75835 - 75853 + g 74 -11.8 -2.85351 | TACCCCAGACGGCTT TCCAACTG ACG CAGTTGGA TATCATCTAACCCGC greB 76535 - 77050 + | transcription elongation factor GreB ompR 77186 - 77905 + | osmolarity response regulator envZ 77902 - 79254 + | osmolarity sensor protein TERM 96 79236 - 79250 + T 84 -11.4 -3.14564 | opp_overlap 79240 GGATGTGAAGCCCAA GCCACC AGC GGTGGC TTGATGGAGGGATAA TERM 97 79375 - 79352 - T 100 -6.7 -5.61913 | AATAAATAGAAAAAA GGGGCAC AATTCTGAAA GTGCCCC CTGTAACGCTAAACT YPDSF_0065 81028 - 79409 - | phosphoenolpyruvate carboxykinase TERM 98 81211 - 81184 - R 100 -13.4 -3.82097 | GTGAAACGGAGGAAA TGGCCGGGCACC AATA GGTACCCGGCTA AGCATTACGAGGATT hslO 82106 - 81225 - | Hsp33-like chaperonin YPDSF_0067 82676 - 82269 - | heat shock protein 15 YPDSF_0068 83385 - 82705 - | hypothetical protein YPDSF_0069 85676 - 83529 - | membrane protein TERM 99 83942 - 83929 - G 78 -3.7 -5.14563 | opp_overlap 83931, overlap 83931 CTGGTGATCAAAAAA CCGCC CGGA GGTGG GCTATTCAACGCTTC TERM 100 84273 - 84284 + g 71 -5.8 -4.28597 | opp_overlap 84270 GCTGGCATCAGAGCC CTGC GGGT GCAG TTGTTTATTGATTGT TERM 101 86567 - 86577 + G 72 -8.2 -3.89617 | AAGAAGTTGGATATG GCGC TGA GCGC TTTGACTTTCTCGCT nudE 86263 - 86808 + | ADP-ribose diphosphatase NudE TERM 102 86888 - 86911 + T 100 -14 -5.10497 | opp_overlap 86888 TAATTTATAAAAAAA CCAGATGATC ATCA GATCATCTGG TTTTTTAGATAAGTT TERM 103 86911 - 86888 - T 100 -14 -5.66684 | opp_overlap 86888 TAATTTATAAAAAAA CCAGATGATC ATCA GATCATCTGG TTTTTTAGATAAGTT mrcA 89499 - 86944 - | peptidoglycan synthetase TERM 104 88295 - 88308 + g 70 -2.3 -5.00616 | overlap 88291 88289 88296 TGCTGACCAGGCTGA ACGAC ATCA GTCGC TTTTTTGGGGACCGG TERM 105 90055 - 90073 + G 75 -8.8 -3.96327 | TGCAGCAATGGCAAG CCTGCTTG GAA CAGGCGGG TTTATCCTCACAAGT TERM 106 90099 - 90109 + G 72 -8.2 -3.83323 | CAAGTGATTGATATT GCGC CAT GCGC TTTACGTTATATGGC TERM 107 90392 - 90403 + G 71 -7.2 -4.10657 | CACACGGTCTTGGTC GCCG CTAA CGGC TTTTGCGCACTATCA YPDSF_0072 89619 - 90515 + | hypothetical protein YPDSF_0073 90515 - 91120 + | hypothetical protein YPDSF_0074 91068 - 91694 + | hypothetical protein YPDSF_0075 91660 - 92088 + | membrane protein YPDSF_0076 92480 - 92091 - | hypothetical protein TERM 108 93478 - 93462 - gH 75 -8.7 -3.62418 | ACAAGTTACTGTAAA CGATGGC GAA ACCATCG TGCTGGGCGGGATTT YPDSF_0077 92287 - 93639 + | putative outer membrane porin HofQ aroK 93988 - 94509 + | shikimate kinase I aroB 94566 - 95654 + | 3-dehydroquinate synthase YPDSF_0080 95908 - 96897 + | hypothetical protein TERM 109 97063 - 97025 - g 75 -10.2 -3.34398 | opp_overlap 97052, overlap 97023 97026 GGCTGGTGGGAAATA TCCGCTGGTTGATGACAT ACG ACGCCATCTTCCAGCGGG AGATTGTTTGATAGA TERM 110 97062 - 97026 - g 78 -13.7 -2.60496 | opp_overlap 97052, overlap 97025 97023 GCTGGTGGGAAATAT CCGCTGGTTGATGACAT ACG ACGCCATCTTCCAGCGG GAGATTGTTTGATAG TERM 111 97334 - 97357 + G 73 -9 -3.69094 | TCTCAATCGCCACTG TTATAACGGC CTGT GTCGTTATAA TTTGAGTGGTGAATT TERM 112 97421 - 97401 - g 82 -3.9 -5.24129 | GGTCGCTACAAAAAA CCCTACTTC CCA GAAGCGGAG TTATATTGGTTTGCT TERM 113 97443 - 97455 + G 91 -5.5 -5.38054 | opp_overlap 97443 97444, overlap 97437 97444 TGGTTTGCTGAAAAA TCGCA AAA TGCGG TTTTTGTTTGTGAGC YPDSF_0081 96981 - 97796 + | DNA adenine methylase YPDSF_0082 98099 - 98776 + | ribulose-phosphate 3-epimerase TERM 114 98982 - 99008 + G 70 -8 -3.79882 | overlap 98961 CGTGAACATAATGCT CAGCTTGTGG CACAGAC CCGCGAGCTG TTTGATCACTATTAT YPDSF_0083 98769 - 99467 + | phosphoglycolate phosphatase YPDSF_0084 99469 - 100509 + | tryptophanyl-tRNA synthetase TERM 115 100554 - 100531 - T 76 -11 -2.53641 | opp_overlap 100532, overlap 100530 CAACGCATCAGTAAT GTGAGGGGGA AATT TCCCCCTCAT TAATCAGCATTAACC TERM 116 100532 - 100553 + T 100 -14.5 -3.16742 | opp_overlap 100531 100530 AACGCATCAGTAATG TGAGGGGGA AATT TCCCCCTCA TTAATCAGCATTAAC cysG 102049 - 100628 - | siroheme synthase YPDSF_0086 102943 - 102137 - | nitrite transporter NirC nirD 103448 - 103122 - | nitrite reductase small subunit YPDSF_0088 105991 - 103445 - | nitrite reductase TERM 117 103843 - 103855 + g 80 -10.5 -3.73072 | opp_overlap 103842 103843 CGGCTGCCAGTAAAT CCGCG TGA CGCGG TTTCATGCCGCCGTT TERM 118 105960 - 105975 + g 100 -7.6 -5.50723 | TGGCCGACCATGCCG TTGCCA ATGA TGGCAA TTTTTATTTTGCTCA TERM 119 106485 - 106498 + G 76 -8.1 -4.15222 | ATGCGCAGGGCGGTT TGGCG CTCC CGCCA TTTATTGAGCCGCAT TERM 120 106869 - 106884 + G 89 -10.4 -4.35524 | TGGGTGCGGATGCGG TGGGGG CGAT CCCCCA TTTTGAATTTACCCG YPDSF_0089 106313 - 107611 + | cytosine deaminase TERM 121 107681 - 107653 - T 78 -10.2 -3.2827 | overlap 107655 TTAGTGAATCATCAA TACCCTGCCACC TTGGC GGCGGCAGGGCG GTAACGCAGATAAAT TERM 122 107679 - 107655 - T 100 -15 -3.20494 | overlap 107653 AGTGAATCATCAATA CCCTGCCACC TTGGC GGCGGCAGGG CGGTAACGCAGATAA YPDSF_0090 108880 - 107696 - | hypothetical protein TERM 123 109631 - 109654 + G 70 -11 -2.68823 | opp_overlap 109618, overlap 109630 109633 AAGTGCCCCGCCAGC CAGTACCGGC CAGT GACGGTACTG ATTATCTGAGGACCA YPDSF_0091 109366 - 111426 + | membrane receptor protein TERM 124 111472 - 111449 - T 100 -12.4 -3.40899 | opp_overlap 111449 AATGCGCTAGCAGAA CGTGGCAGGC GATG GCTTGCCACG TTAATAACAATTAAT TERM 125 111449 - 111472 + T 100 -14.6 -3.16921 | opp_overlap 111449 AATGCGCTAGCAGAA CGTGGCAGGC GATG GCTTGCCACG TTAATAACAATTAAT YPDSF_0092 112525 - 111539 - | LacI family transcriptional regulator TERM 126 112201 - 112216 + g 71 -7.6 -4.10179 | AGTTATACAGCCGCT GAATGG CTAA CCATTC TTTATCTGCATTATC TERM 127 112330 - 112310 - G 74 -2.4 -5.18357 | overlap 112311 TAAGGCACCAAAAAA GCCCCCTC GGTAT GAGGTGGT CACCAACCCCAGCGT TERM 128 114106 - 114096 - H 71 -8.2 -3.53811 | TGTAGGGGCTCCAAA CGGC TCT GCCG GCGATAAAGTTCAGT TERM 129 114170 - 114202 + H 86 -12.2 -3.00498 | gap 1, opp_overlap 114169 114168 114172, overlap 114172 114174 ATCTGTGGATAAATT CAGGCTCACCATGAT TTTC ATCA-GGTGAGTCTG TCTCTGTACGGTCTC TERM 130 114287 - 114274 - H 84 -5.3 -5.35224 | opp_overlap 114274 TGCAGAAAAACAAAA TGAGA GCGC TCTCA TTTGAAGCAGATTAG TERM 131 114377 - 114409 + H 81 -11.3 -2.8194 | opp_overlap 114373, overlap 114369 AGTAAGAGAATCGTG ATCCAGACTCCAGAA TCT TGCTGGAGTCTGGGA TGTGGTGACTCATTA YPDSF_0095 114596 - 115165 + | peptidyl-prolyl cis-trans isomerase A (rotamase A) YPDSF_0096 115491 - 117032 + | hypothetical protein YPDSF_0097 117275 - 117850 + | para-aminobenzoate synthase component II TERM 132 117886 - 117903 + F 76 -2.7 -5.30686 | CCATGACATCATTTA TCATTTG CTTG CGGATGA TTTTTTATGCATATT argD 117983 - 119200 + | bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein TERM 133 119326 - 119300 - T 84 -10.1 -3.82218 | gap 1, opp_overlap 119309, overlap 119301 119316 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 134 119327 - 119301 - T 72 -10.1 -2.88849 | gap 1, opp_overlap 119309, overlap 119300 119316 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT YPDSF_0099 121546 - 119426 - | hypothetical protein TERM 135 119984 - 119996 + g 71 -5.5 -4.58395 | opp_overlap 119977 CTGATAAGCCTCCAG TGCCT GAT GGGCA TTTTTACGCAATAAC TERM 136 120958 - 120970 + g 73 -5.5 -4.66833 | GTTGTCTATCGAGTA GCGGT GGT ATCGC TTTTTCGGGTTCAAG TERM 137 121618 - 121588 - R 100 -12.7 -4.75063 | gap 1, opp_overlap 121588 AGAAAACGGGAAAAA CCGGCGCTAATAGC TTCA GCT-TTAACGCCGG TTTTTAGAGGGAATT TERM 138 121588 - 121618 + r 100 -10.5 -4.57341 | gap 1, opp_overlap 121588 AGAAAACGGGAAAAA CCGGCGCTAATAGC TTCA GCT-TTAACGCCGG TTTTTAGAGGGAATT YPDSF_0100 122264 - 121632 - | cAMP-regulatory protein TERM 139 121668 - 121696 + g 78 -6.2 -4.8048 | gap 2 AATCGTTTTACCGTG TGC-GG-AGATCAA GTT TTGATCTTCCAGCA TTTTTAGTATCCGCC YPDSF_0101 122600 - 123007 + | hypothetical protein TERM 140 123019 - 123042 + F 93 -8.9 -4.56775 | opp_overlap 123010 123009 123019 GTAAATGGTGAACCA CCCATAGCC CGGTTT GGTTATGGG TTTTTAGGCCAAAAT TERM 141 123144 - 123174 + G 100 -8.3 -5.3167 | overlap 123137 AATATCGGTTGCCTG TGGGGCGATATCA TTGTT TGTTGTCGCCTCA TTTTCTTTGTTTTTC YPDSF_0102 123079 - 123510 + | hypothetical protein YPDSF_0103 124557 - 123688 - | phosphoribulokinase 1 TERM 142 123872 - 123836 - G 75 -8.7 -3.90038 | overlap 123870 AGCAAATAAGGGAAA TCGATGTGATCCAAACC ACG GAAATGGATCACAACGA AACTTTCGTCTAACG TERM 143 124214 - 124182 - G 72 -4 -4.84311 | gap 1, overlap 124184 CTTCATAGAATAAAA CATCCGTGGGTTCCG GTAG CGGCTCCCAAGGA-G TAAAGGTGCCAGGGA TERM 144 124213 - 124184 - G 71 -7.7 -4.03793 | overlap 124182 TCATAGAATAAAACA TCCGTGGGTTCCG GTAG CGGCTCCCAAGGA GTAAAGGTGCCAGGG YPDSF_0104 124942 - 124706 - | hypothetical protein YPDSF_0105 125919 - 124939 - | putative hydrolase TERM 145 125732 - 125708 - G 71 -5 -4.58283 | opp_overlap 125730, overlap 125710 125730 TAAGGGCTGTAAAAA TTCCCTTCCA AACCG TGGAAGAGCA CCACTCGGGGCTTCT YPDSF_0106 126021 - 126623 + | ABC-transport protein TERM 146 126700 - 126738 + F 83 -12.1 -2.74597 | opp_overlap 126707, overlap 126703 126707 126708 AGTACATCTGTTATC GCATAAAGGAATAAA CAATATTCT TTTATTCCTTTATGC TGCTCTCTCTCTCGG tauA 126826 - 127887 + | taurine transporter substrate binding subunit TERM 147 128225 - 128205 - g 77 -9 -4.0274 | gap 1 GGGATGAGTAAAGAA CAGCGGCGG GTAA CCGCC-CTG AAAATGCTAAACCGG tauB 127896 - 128663 + | taurine transporter ATP-binding subunit TERM 148 129228 - 129242 + G 79 -7 -4.64846 | overlap 129226 CCCGTGCATTAGGTG CCAGCC GTT GGCAGG TTTTATGGTTTGTGG YPDSF_0109 128660 - 129514 + | taurine transporter subunit tauD 129511 - 130359 + | taurine dioxygenase YPDSF_0113 132435 - 131446 - | glycosyl transferase TERM 149 132485 - 132518 + r 73 -9.7 -3.04263 | opp_overlap 132475 132478, overlap 132487 AAAATCACGCCGCTC TAGTCGTGCGACT CTAACTCA ATTCGCACGACTA TATTCACGATGCCAT YPDSF_0114 134492 - 132570 - | putative ABC transporter ATP-binding protein TERM 150 132808 - 132820 + g 70 -9.1 -3.65199 | opp_overlap 132801 132800 GTCATAATCTGCTTA CGCAG TGG CTGCG TTTGAGTGCGGAATT TERM 151 134162 - 134178 + g 100 -6.5 -5.63103 | overlap 134163 TACCGTGCACGGTTG CGATGGC ATG GCCATCA TTTTTTTCATTGGCA TERM 152 134163 - 134177 + g 80 -10 -3.96777 | overlap 134162 ACCGTGCACGGTTGC GATGGC ATG GCCATC ATTTTTTTCATTGGC YPDSF_0115 134743 - 135291 + | glutathione-regulated potassium-efflux system ancillary protein KefG YPDSF_0116 135295 - 137103 + | glutathione-regulated potassium-efflux system protein KefB YPDSF_0117 137119 - 137340 + | hypothetical protein TERM 153 137461 - 137450 - g 74 -4.4 -4.85545 | ATGAAAGTAACAAAA GACT TGGT AGTC AGCCTGGCTTACCAG YPDSF_0118 137435 - 138022 + | FKBP-type peptidyl-prolyl cis-trans isomerase TERM 154 138038 - 138070 + T 100 -16.5 -2.87931 | opp_overlap 138025 138045, overlap 138045 TATCTGACCCCGTCA GCAAAAAGCCAGC CTTCATC GCTGGCTTTTTGC TCTGTACGCGATCAC TERM 155 138045 - 138063 + T 85 -7.4 -4.84527 | opp_overlap 138045, overlap 138038 CCCCGTCAGCAAAAA GCCAGC CTTCATC GCTGGC TTTTTGCTCTGTACG TERM 156 138063 - 138045 - T 81 -7.4 -4.72272 | opp_overlap 138045 138038 CCCCGTCAGCAAAAA GCCAGC CTTCATC GCTGGC TTTTTGCTCTGTACG YPDSF_0119 138461 - 138243 - | hypothetical protein TERM 157 139414 - 139400 - g 83 -2.8 -5.41359 | opp_overlap 139400, overlap 139402 AAGCAAATCAAAAAA GGTG GCAAAAT CACC TTGGTTATCCCGCCA YPDSF_0120 138776 - 139576 + | FKBP-type peptidyl-prolyl cis-trans isomerase TERM 158 139607 - 139630 + F 100 -9.6 -6.22802 | opp_overlap 139607 ACACTCTTCTCATAA CCGTTACGAT AATT GTCGTGACGG TTTTTTTTTGTGCGC YPDSF_0121 139830 - 140552 + | DNA-binding protein YPDSF_0122 140552 - 140947 + | hypothetical protein TERM 159 141130 - 141119 - g 80 -3 -5.30686 | overlap 141108 AACAGCCAGAAAAAA TTCT TGCC AGAA ACTATATTGCTACTT YPDSF_0123 140947 - 141312 + | hypothetical protein YPDSF_0124 141332 - 141619 + | tRNA 2-thiouridine synthesizing protein B rpsL 141757 - 142131 + | 30S ribosomal protein S12 YPDSF_0126 142228 - 142698 + | 30S ribosomal protein S7 YPDSF_0127 142792 - 144900 + | elongation factor G TERM 160 144957 - 144923 - f 72 -9.3 -3.10579 | overlap 144920 GGTTTAAAACAATGA TCCAGTGCTCTCTCA TTTAG TGGGAGAGCACAAGA GTAAGGAATATAGTC YPDSF_0128 144973 - 146157 + | elongation factor Tu TERM 161 146193 - 146206 + F 100 -8.1 -5.88565 | opp_overlap 146187 146192 146193 TTGATCAAACCAAAG GGTGC CTCG GCACC TTTTTTTATTGTGCC TERM 162 146229 - 146247 + F 100 -16 -3.07307 | opp_overlap 146229 ATTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC TERM 163 146247 - 146229 - f 100 -16 -4.37092 | opp_overlap 146229 ATTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC YPDSF_0129 146360 - 146818 + | transposase for the IS1541 insertion element TERM 164 146896 - 146920 + F 93 -9.9 -4.25056 | opp_overlap 146899, overlap 146898 146899 ATAGGCGCATATGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTGATAAAGTG TERM 165 146898 - 146918 + F 100 -12.5 -3.72374 | opp_overlap 146899, overlap 146896 146899 AGGCGCATATGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTGATAAAG TERM 166 146917 - 146899 - f 100 -16 -4.8048 | opp_overlap 146898 146896 146899 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTGATAAA TERM 167 146899 - 146917 + F 100 -16 -2.82942 | opp_overlap 146899, overlap 146898 146896 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTGATAAA YPDSF_0130 146994 - 147200 + | bacterioferritin-associated ferredoxin YPDSF_0131 147279 - 147752 + | bacterioferritin, iron storage and detoxification protein YPDSF_0132 148166 - 148477 + | 30S ribosomal protein S10 rplC 148510 - 149139 + | 50S ribosomal protein L3 TERM 168 149188 - 149176 - g 77 -10.5 -3.54414 | opp_overlap 149170, overlap 149174 ATTGGTAATGAAAGA CGCGC CAG GCGCG CTGACTGTTTCCGAA rplD 149156 - 149761 + | 50S ribosomal protein L4 TERM 169 150042 - 150022 - g 74 -9.7 -3.57462 | opp_overlap 150025, overlap 150025 TACGTCACCCTGAAA GAAGGCCAG AAT CTGGACTTC ATCGGCGGCGCAGAG rplW 149758 - 150060 + | 50S ribosomal protein L23 rplB 150077 - 150901 + | 50S ribosomal protein L2 rpsS 150916 - 151194 + | 30S ribosomal protein S19 rplV 151209 - 151541 + | 50S ribosomal protein L22 TERM 170 151705 - 151673 - g 74 -10 -3.61654 | overlap 151674 GACAGCGACTTTAAA GTTCGCCAATTCCT GACTA AGGAATTAGCGAAA GCTTCCGTTTCTCGC TERM 171 151704 - 151674 - g 79 -13.5 -2.76671 | overlap 151673 ACAGCGACTTTAAAG TTCGCCAATTCCT GACTA AGGAATTAGCGAA AGCTTCCGTTTCTCG rpsC 151559 - 152257 + | 30S ribosomal protein S3 rplP 152270 - 152680 + | 50S ribosomal protein L16 YPDSF_0141 152680 - 152871 + | 50S ribosomal protein L29 rpsQ 152871 - 153125 + | 30S ribosomal protein S17 TERM 172 153149 - 153175 + F 100 -10.2 -5.24531 | opp_overlap 153149 153152 CCAACTCGAACATAA TAAGCGGCTC TGAAAAT GGGCCGCTTA TTTTTTCTACCCACT TERM 173 153175 - 153149 - f 70 -8 -3.69069 | opp_overlap 153149, overlap 153152 CCAACTCGAACATAA TAAGCGGCTC TGAAAAT GGGCCGCTTA TTTTTTCTACCCACT rplN 153306 - 153677 + | 50S ribosomal protein L14 rplX 153688 - 154002 + | 50S ribosomal protein L24 TERM 174 154179 - 154161 - g 76 -7.4 -4.30987 | opp_overlap 154160, overlap 154147 ATCGCTGACAAGAAA CTGCTGGA TAA TGCAGCAG CTGACTTGGCAGCAA rplE 154017 - 154556 + | 50S ribosomal protein L5 TERM 175 154612 - 154591 - g 77 -8.7 -4.02021 | overlap 154592 154594 AAGCAATCAATGAAA GCACGCGAA GTTG TTCGCGTGA AACTAGCTAACAAAT TERM 176 154611 - 154592 - g 76 -12.2 -3.00128 | overlap 154591 154594 AGCAATCAATGAAAG CACGCGAA GTTG TTCGCGTG AAACTAGCTAACAAA rpsN 154570 - 154875 + | 30S ribosomal protein S14 rpsH 154909 - 155301 + | 30S ribosomal protein S8 rplF 155316 - 155849 + | 50S ribosomal protein L6 rplR 155859 - 156212 + | 50S ribosomal protein L18 TERM 177 156433 - 156413 - g 70 -4.6 -4.67353 | opp_overlap 156425, overlap 156425 GCAGCGATCCAAAAA GCGATGGA AAAAG CCCGTCGC GCTATGATTAACGTT rpsE 156227 - 156730 + | 30S ribosomal protein S5 rplO 156916 - 157350 + | 50S ribosomal protein L15 TERM 178 157792 - 157821 + G 79 -7.9 -4.45168 | overlap 157784 GAATATGCCTGGGAT GCAAGGTCTGG TAATCAAT CCAGGCTTTGC TTTCTATTTTACCGC secY 157358 - 158689 + | preprotein translocase subunit SecY TERM 179 158870 - 158899 + F 100 -12.3 -4.61868 | gap 1 TTTCTTGCAAAGTTG GGTTGAGCTGGCTA GAT TAGCCAGC-CAATC TTTTGTATGTGACTG rpsM 158987 - 159343 + | 30S ribosomal protein S13 YPDSF_0154 159360 - 159749 + | 30S ribosomal protein S11 TERM 180 159739 - 159755 + F 82 -7.9 -4.42851 | opp_overlap 159738 159739 GTCCGCCGAAAAAGC GCCGCGT ATA ACGCTGC TTTTAGGTTTGTTGG rpsD 159780 - 160400 + | 30S ribosomal protein S4 TERM 181 160385 - 160403 + F 77 -10.4 -3.14132 | ACACCTGATCGTCGA GCTTTACT CCA AGTAAAGC TTAGTACCAAAGAGA TERM 182 161332 - 161320 - g 73 -3.4 -5.01732 | AACCTGGGTAAAAAA TCTC TTACT GAGA TTAAAGACGTGCTCG YPDSF_0156 160426 - 161415 + | DNA-directed RNA polymerase subunit alpha TERM 183 161505 - 161533 + G 77 -10.4 -3.57246 | gap 1, overlap 161501 161503 GTAACAGCAGCCATC GCCAGGCTATGTT CCGT AACATGGCC-GGC TCTTTGGTTCGTCAT TERM 184 161727 - 161701 - g 71 -11.4 -2.73123 | opp_overlap 161698 161726 AAAACTGTTTAACGA GCTAGGCCCGCG TTT CGCGAGCCGCGC CGGTGGTTACACTCG rplQ 161456 - 161845 + | 50S ribosomal protein L17 TERM 185 161891 - 161854 - f 100 -20.1 -3.62032 | opp_overlap 161866, overlap 161855 161866 AGAGTAATCTGTAAA CGCGTAAAAAAACCGGG CTTG CCCGGTTTTTTTACGCC CACCATATACAGCTT TERM 186 161890 - 161855 - f 100 -23.6 -2.76737 | opp_overlap 161866, overlap 161854 161866 GAGTAATCTGTAAAC GCGTAAAAAAACCGGG CTTG CCCGGTTTTTTTACGC CCACCATATACAGCT TERM 187 161866 - 161879 + F 100 -9.5 -5.40072 | opp_overlap 161855 161854 161866 AAACGCGTAAAAAAA CCGGG CTTG CCCGG TTTTTTTACGCCCAC TERM 188 161879 - 161866 - f 100 -9.5 -5.4477 | opp_overlap 161866, overlap 161855 161854 AAACGCGTAAAAAAA CCGGG CTTG CCCGG TTTTTTTACGCCCAC zntR 162292 - 162717 + | zinc-responsive transcriptional regulator TERM 189 162957 - 163002 + G 100 -17.1 -2.90615 | opp_overlap 162954 162955, overlap 162960 AAAAGGTAGTAACTG GGAGGCCAGTGGTAAGCAATC AATA GATTTTTTACTACTGGCCTTC TGATTTAAAAGAAAT TERM 190 162960 - 162999 + G 91 -15.2 -3.60151 | opp_overlap 162954 162955, overlap 162957 AGGTAGTAACTGGGA GGCCAGTGGTAAGCAATC AATA GATTTTTTACTACTGGCC TTCTGATTTAAAAGA YPDSF_0159 162805 - 163005 + | hypothetical protein mscL 163528 - 163115 - | large-conductance mechanosensitive channel TERM 191 163292 - 163278 - G 74 -3.6 -4.95547 | GCTACAATAACAAAA TCAAAA ATG CTTTGA ATAAATGTACCATAA trkA 165043 - 163667 - | potassium transporter peripheral membrane component TERM 192 164048 - 164068 + g 74 -3.9 -5.00884 | ATCGACGTAAGCACT GCGTTGG ATAAGTA CCATCGC TTTTTTCGCACCCAT YPDSF_0162 166388 - 165099 - | 16S rRNA methyltransferase B TERM 193 165136 - 165156 + g 76 -5.3 -4.86731 | opp_overlap 165131 TAGAAGAAACCATCA CCGTCCTCA GGA TGTGGAAGG TTTTGTTTACCAGGC TERM 194 166414 - 166399 - R 89 -6.8 -5.32944 | TTCATAACCAAAAAA GCTGAC AAAC GCCAGC AAATAAAGGGAGAAG fmt 167429 - 166482 - | methionyl-tRNA formyltransferase TERM 195 166950 - 166966 + g 79 -8.1 -4.37886 | ACTGGTATCTTCTGG TTGAATG GCA CATTCAA TTTTATGCAGCATAG TERM 196 167384 - 167360 - G 89 -15 -3.17622 | overlap 167364 TATGTTGAGAAGAGA GCAACGCGCC TAAAT GGCGCGCTGC AAAATCAGGAGTTCC TERM 197 167380 - 167364 - G 75 -10.8 -3.40191 | overlap 167360 TTGAGAAGAGAGCAA CGCGCC TAAAT GGCGCG CTGCAAAATCAGGAG def 167966 - 167454 - | peptide deformylase TERM 198 168776 - 168798 + GH 72 -7.1 -3.91084 | gap 1, overlap 168779 GCTGTGTTAGTCGTT GAGGCCACTT TAAA AAGTGGC-TC TTTGATTACCGCTCG TERM 199 168779 - 168796 + GH 78 -9.9 -3.54414 | overlap 168776 GTGTTAGTCGTTGAG GCCACTT TAAA AAGTGGC TCTTTGATTACCGCT YPDSF_0165 168101 - 169222 + | hypothetical protein YPDSF_0166 169194 - 169667 + | hypothetical protein YPDSF_0167 169687 - 170247 + | DNA-binding protein TERM 200 170746 - 170763 + G 73 -9.1 -3.67792 | overlap 170730 ATTACCGGTGTTATC CGGTCAC GTTG GTGGCCG TTTGAATCCATCTGA YPDSF_0168 170249 - 170821 + | putative ribosome maturation factor aroE 170830 - 171651 + | shikimate 5-dehydrogenase YPDSF_0170 172248 - 171706 - | hypothetical protein TERM 201 176160 - 176142 - H 82 -10.3 -3.57798 | overlap 176155 CATAAGTAACGATAA TGCGGGT GAAAA ACCCGCA CGCCGGAAGACCAAG TERM 202 176620 - 176594 - H 70 -9.4 -2.75844 | opp_overlap 176608 176616, overlap 176593 176596 GGCGTTAGGTGAAAG GACTAGCTCCTG GAG CTGAAGCCAGTC GCAGATACCAGCTGG TERM 203 176667 - 176656 - H 74 -4.4 -5.06816 | ACTGTTTAATAAAAA CACA GCAC TGTG CAAACACGAAAGTGG TERM 204 177779 - 177789 + H 74 -6.8 -4.27316 | opp_overlap 177779 GGCTTAACCTTACAA CACC GAA GGTG TTTTGAATTGAGAGA TERM 205 178289 - 178257 - H 100 -11.4 -4.50627 | gap 1, opp_overlap 178257 178263, overlap 178263 CAGGTATCAAATAAA CAGAAA-GGCCATCC ATTA GGGTGGCCTTTTCTG TTTTTGCGATCCGTC TERM 206 178257 - 178289 + H 100 -13.6 -4.62783 | gap 1, opp_overlap 178257 178263, overlap 178263 CAGGTATCAAATAAA CAGAAA-GGCCATCC ATTA GGGTGGCCTTTTCTG TTTTTGCGATCCGTC TERM 207 178282 - 178263 - H 95 -9.2 -4.50993 | opp_overlap 178257 178263, overlap 178257 TCAAATAAACAGAAA GGCCATCC ATTA GGGTGGCC TTTTCTGTTTTTGCG TERM 208 178263 - 178282 + H 100 -11.4 -4.98672 | opp_overlap 178263 178257, overlap 178257 TCAAATAAACAGAAA GGCCATCC ATTA GGGTGGCC TTTTCTGTTTTTGCG YPDSF_0171 178986 - 179915 + | homoserine O-succinyltransferase TERM 209 179960 - 179980 + T 70 -7.5 -3.8165 | opp_overlap 179959, overlap 179957 ATAGATGCTAATTAT GGCGGCT GAATCGA GGCCGCC TATTATTTTCTTCCC YPDSF_0172 180258 - 180115 - | hypothetical protein TERM 210 180947 - 180958 + G 74 -7.2 -4.27843 | opp_overlap 180936, overlap 180944 GCAACTGCTGGCGAA GGGC AGCG GCCC TTATTTCTATTTGCC YPDSF_0173 180336 - 181934 + | malate synthase YPDSF_0174 181981 - 183288 + | isocitrate lyase TERM 211 183424 - 183398 - f 84 -10.1 -3.82218 | gap 1, opp_overlap 183407, overlap 183399 183414 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 212 183425 - 183399 - f 72 -10.1 -2.88849 | gap 1, opp_overlap 183407, overlap 183398 183414 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT TERM 213 183499 - 183522 + F 74 -6.6 -4.4009 | opp_overlap 183498 183499, overlap 183503 CACTTTGTCAATAAC CTCAGCCTGC TTAT GCAGGCTCCG TTTTGTACGGTAGGG TERM 214 183503 - 183518 + F 75 -10.4 -2.80345 | opp_overlap 183499 183498, overlap 183499 TTGTCAATAACCTCA GCCTGC TTAT GCAGGC TCCGTTTTGTACGGT TERM 215 185114 - 185133 + G 73 -2.8 -5.0133 | gap 1 GCCATTTCTTATGCA GTGACCGGA AAG TCAGG-CAC TTTTTTGAGGAGATG aceK 183544 - 185271 + | bifunctional isocitrate dehydrogenase kinase/phosphatase protein YPDSF_0176 186233 - 185391 - | transcriptional repressor IclR TERM 216 186028 - 186013 - G 70 -4.6 -4.71828 | ACCTGACGAACAAAA CCCTGC TGTT GCATGG TCGTGAGTAAACGGT TERM 217 188386 - 188374 - g 74 -4.1 -4.9218 | GATTTAGCAGAAAAA TACCG TGA CAGTA AAAGTGGCGAGGTCG TERM 218 189189 - 189154 - g 87 -7.5 -5.0133 | opp_overlap 189154 CACGCCCGTAAAAAA CCGCGCACCCCGC CGGTCAGTTT GCAGGCTGCACGG AATAACCCAACGGTG metH 186448 - 190143 + | B12-dependent methionine synthase TERM 219 190168 - 190221 + T 80 -8.9 -3.967 | opp_overlap 190177, overlap 190176 190181 AAAGGCGAGATAATG TTGATCTAACGAGGGGGATAAACCG TGAT TGGTTTATCCCCTTCGATATTACAG TTTAATTAATGGATT TERM 220 190176 - 190213 + T 100 -15.7 -3.13784 | opp_overlap 190177, overlap 190168 190181 GATAATGTTGATCTA ACGAGGGGGATAAACCG TGAT TGGTTTATCCCCTTCGA TATTACAGTTTAATT TERM 221 190212 - 190177 - T 100 -16.3 -3.0701 | opp_overlap 190176 190168 190181 ATAATGTTGATCTAA CGAGGGGGATAAACC GTGATT GGTTTATCCCCTTCG ATATTACAGTTTAAT TERM 222 190181 - 190208 + T 100 -15 -3.19293 | opp_overlap 190177, overlap 190176 190168 TGTTGATCTAACGAG GGGGATAAACCG TGAT TGGTTTATCCCC TTCGATATTACAGTT TERM 223 190742 - 190755 + T 95 -8.1 -5.13722 | TATAGCTGATGGTCT GGACG CTAT CGTCC TTTTCTTTTCCTAAG TERM 224 190901 - 190929 + T 71 -8.8 -3.38162 | overlap 190896 CTTGTTTTGCATTAC TGTGGCTGCCGC CAAGT GCGGCAGAAACA TTGACTTTATTGAGT TERM 225 191753 - 191786 + T 90 -10.9 -3.9344 | CACTGGTGCTGCCTT GACTATGGCCGCCGC CCAA GCCGCCGCCAAAGTC TTTACTGTTCAGCTT YPDSF_0180 196992 - 195217 - | hemolysin activator protein TERM 226 195367 - 195378 + g 76 -5.8 -4.72272 | opp_overlap 195333, overlap 195355 CCCCATAGCGCTGAC CCAC CCCT GTGG TTTTTGCTGGAGACG TERM 227 197226 - 197244 + r 74 -4.5 -4.89393 | opp_overlap 197226, overlap 197236 197237 CGTGTTAGCAGTGAA TGCCCGA TGATC TCAGGCA TTTTTCTGAGGTTTA YPDSF_0181 198858 - 197473 - | aspartate kinase III TERM 228 199513 - 199494 - g 82 -11.4 -3.75115 | opp_overlap 199494 199492 199509, overlap 199490 TGGTGAGAAAATTAA CCGCACAG AAGA CCGTGCGG TATTGCATATTGCTC pgi 199228 - 200874 + | glucose-6-phosphate isomerase TERM 229 200914 - 200936 + F 100 -10.6 -5.86332 | ATCTGTACTTTATTA GGCCTCTTAT TCT GTAAGGGGCC TTTTTTTTGGCTTGA TERM 230 201085 - 201099 + G 87 -4.2 -5.52384 | overlap 201097 GATTGATTATGTTGG CCGCTA TTT TGGTGG TTTTTTTGGTGAAGG YPDSF_0183 201009 - 201416 + | phosphate-starvation-inducible protein PsiE TERM 231 201481 - 201461 - T 100 -9.6 -5.24799 | overlap 201462 TGATAAACATAAAAA TGGCGGCC ATTAA GGCCGCCC TAAAGACACAGTACC TERM 232 201480 - 201462 - T 100 -13.1 -3.73253 | overlap 201461 GATAAACATAAAAAT GGCGGCC ATTAA GGCCGCC CTAAAGACACAGTAC malG 202449 - 201559 - | maltose transporter permease malF 204040 - 202463 - | maltose transporter membrane protein TERM 233 203983 - 203997 + g 80 -2.1 -5.42198 | gap 1, overlap 203985 ATTTAAGCGCATCAC TCTGCC ACCA GGC-GA TTTTCTTTTTTCGGC TERM 234 204188 - 204209 + r 95 -11.5 -3.87815 | ATGGCAAATTCTGTC GAGGCACGG CGAA CCGTGCCCC TTTCTCAGAGTAGAC malE 205438 - 204227 - | maltose ABC transporter periplasmic protein TERM 235 205181 - 205143 - G 76 -7.5 -4.29738 | gap 1, opp_overlap 205176 GCATAGCCACCAAAA CGGTCATGGGCCCAGA AGATAATG TCCGGGCC-ATCACCG GTTGCGGCGACTTGT YPDSF_0187 206026 - 206262 + | hypothetical protein TERM 236 206494 - 206474 - g 70 -11.1 -2.64466 | opp_overlap 206469, overlap 206473 AACGCATGAATGAAG TGCCGCCCT CTG AGCGCGGCA TTGGCATGGTGTTTC YPDSF_0188 206266 - 207375 + | maltose/maltodextrin transporter ATP-binding protein lamB 207446 - 208717 + | maltoporin TERM 237 208729 - 208748 + F 80 -11.4 -2.66969 | overlap 208726 208726 GTAACAGCGATTCTT CAGCCGTC TGCG GGCGGCTG TACGTTATCTTGATG TERM 238 209146 - 209160 + G 79 -11.4 -3.52906 | opp_overlap 209145, overlap 209143 AGATATTCAACTTAC TGCGGG CAG CCCGCA TATTTCTCAGGGTGA TERM 239 209186 - 209196 + G 79 -8.2 -4.28774 | GGTGAGGTTGAAGGC GCGG TAG CCGC TTTTGCCTTGCCTGC TERM 240 209375 - 209348 - g 74 -4.9 -4.7497 | gap 1, overlap 209368 TTCACCTATGAAAAA GCGGGC-ATCAT GATCA ATGATCGCCTGC AAGGCGTGATGAAAT YPDSF_0190 208958 - 209869 + | maltose regulon periplasmic protein TERM 241 209902 - 209919 + F 100 -12.7 -5.41359 | TATGGCTGGATGGTT GGTGCGC CTTG GCGCACC TTTTTTCGTTTGGTT YPDSF_0191 210208 - 210618 + | hypothetical protein TERM 242 210757 - 210728 - T 100 -13.7 -4.7871 | overlap 210729 AACCATCAGTAAAAA CCAGCAGCCAATA ACCT CATTGGCTGCTGA AGAAATACAATATTA TERM 243 210756 - 210729 - T 100 -15 -3.46141 | overlap 210728 ACCATCAGTAAAAAC CAGCAGCCAATA ACCT CATTGGCTGCTG AAGAAATACAATATT YPDSF_0192 211288 - 210770 - | hypothetical protein TERM 244 212172 - 212145 - g 79 -5.6 -5.01732 | AATGTGGCGAAAAAA GTTCCAGAGCTC AAAA AAATTCTGGAAC TACGGGAAGCGTTAG YPDSF_0193 211812 - 212309 + | hypothetical protein TERM 245 213061 - 213080 + G 70 -8.6 -3.80094 | AAATGGCGTGCTCTG CGTGAGTC TGAA GATTCACG TTATCTTGGTTTGAC TERM 246 213535 - 213521 - g 74 -8.6 -3.97406 | overlap 213512 213531 GGAAAATGGCAGAAA CCAACT ACA AGTTGG GCACGCAACTGCCGT YPDSF_0194 212377 - 213858 + | hypothetical protein YPDSF_0195 213865 - 214305 + | hypothetical protein TERM 247 214511 - 214480 - gT 70 -2.4 -5.00884 | gap 1, opp_overlap 214481 214484, overlap 214481 214484 ACCTGCGTGAAAAAA TCGATGA-TCAATTC CCT GAATTGACTCATGGT TTACTGAATATGTTG TERM 248 215440 - 215458 + GT 77 -11 -2.73735 | overlap 215433 215450 215452 TGCTTTTCTACCTGA GTCCGGTA TTC TGCCGGAC TCATTCCGCCTGTTT YPDSF_0197 216206 - 215421 - | transposase for insertion sequence IS1661 YPDSF_0196 214305 - 215531 + | hypothetical protein YPDSF_0198 216565 - 216260 - | insertion element IS1661 DNA-binding protein TERM 249 216826 - 216780 - H 100 -15.4 -3.05384 | gap 1, opp_overlap 216786, overlap 216785 216806 GGGTGTTTCATTGAA CCGAACCTCCAGATCATGGAT AAAAAG ATCCAAGATCTGG-GGTTCAG TGCACCGGGGTCATG TERM 250 216821 - 216785 - H 77 -10.3 -3.19192 | gap 1, opp_overlap 216786, overlap 216780 216806 TTTCATTGAACCGAA CCTCCAGATCATGGAT AAAAAG ATCCAAGATCTGG-GG TTCAGTGCACCGGGG TERM 251 216786 - 216821 + H 93 -12.7 -3.05384 | opp_overlap 216785 216780 216806 TTCATTGAACCGAAC CTCCAGATCATGGAT AAAAAG ATCCAAGATCTGGGG TTCAGTGCACCGGGG TERM 252 216816 - 216806 - H 75 -5.4 -4.88736 | opp_overlap 216786, overlap 216785 216780 GATCATGGATAAAAA GATC CAA GATC TGGGGTTCAGTGCAC YPDSF_0199 216826 - 217569 + | hypothetical protein YPDSF_0200 217533 - 218621 + | hypothetical protein TERM 253 218770 - 218759 - g 78 -2.2 -5.28778 | overlap 218763 ACCATGGATAAAAAA CAAC CAAC GCTG TCATTGCGGGTCGTC YPDSF_0201 218747 - 220063 + | hypothetical protein YPDSF_0202 220063 - 220608 + | lipoprotein YPDSF_0203 220611 - 221957 + | hypothetical protein YPDSF_0204 221957 - 222724 + | membrane protein TERM 254 223495 - 223485 - g 70 -3.2 -4.83615 | CAGGTGCCAGAAAAA CTGC GTA ACAG CGAGTTGATGACGCT TERM 255 225272 - 225246 - g 74 -8.6 -4.08706 | overlap 225242 TTGTTATTACAGAAA GTGGCCGCTGGC ACC GCTATCAGCCAC ATTCGGATCGCGGTA YPDSF_0205 222735 - 225329 + | Clp ATPase TERM 256 226059 - 226047 - g 73 -6.2 -4.54821 | ACGGTAACGACAAAA GCCG TATTG CGGC CAGTTTGGGGCTATC YPDSF_0206 225326 - 226123 + | hypothetical protein YPDSF_0207 226120 - 226806 + | hypothetical protein YPDSF_0208 226812 - 228200 + | hypothetical protein TERM 257 228287 - 228309 + G 81 -12.8 -3.23711 | opp_overlap 228286 228287, overlap 228278 TTCCTCGCCTTAAAG CGTCAATACC GGT GGTATTGGCG TTGATGGCTTGTGCG TERM 258 229599 - 229574 - g 86 -6.9 -5.00616 | TCTGGCTGCAAAAAA CGAGAAAGCGA ATGT TCATTTTCTCG GGGGTGGGTGCCCTG TERM 259 230916 - 230898 - g 79 -8.8 -4.18018 | overlap 230899 GTTGGCGATCCAAAA CTCGCCCG CGC CGGGCAAA GCGGCGTTGAAGGCG YPDSF_0209 228232 - 231765 + | hypothetical protein TERM 260 232011 - 231984 - gf 70 -3.4 -4.77983 | gap 1, overlap 231988 231991 AAGAGATCAACAAAA TCAACCACCCGGC ACG GCCAGA-GGTCAA CTGGGGTTTGATTGA TERM 261 232121 - 232111 - gf 80 -2.4 -5.47218 | opp_overlap 232111 CCGCACCCAAAAAAA TGGC CTG GCCG GTTTCACCGAGGGCT YPDSF_0210 231890 - 232672 + | hypothetical protein TERM 262 233116 - 233104 - gf 78 -10.5 -3.39449 | opp_overlap 233102 233104 GCCGATGAACATCAA CCGGC CTC GCCGG TCTTGATAAAACAAA TERM 263 233104 - 233116 + GF 77 -10.5 -3.13403 | opp_overlap 233104, overlap 233102 GCCGATGAACATCAA CCGGC CTC GCCGG TCTTGATAAAACAAA YPDSF_0211 232579 - 233202 + | hypothetical protein YPDSF_0212 233224 - 235614 + | Rhs accessory genetic element YPDSF_0213 235620 - 236078 + | hypothetical protein TERM 264 236214 - 236229 + G 74 -6.8 -4.34488 | overlap 236205 CACCGGCGGGGCGAC GCTGGT CGCT ACCGGC TTTATTGTGGGTATG TERM 265 238079 - 238052 - g 70 -10.6 -2.93348 | GCTACGAATATGATA TCGATGGCCATC TGCT GACGGTCATCGA TGCTGAAAACCATTC YPDSF_0214 236071 - 238935 + | hypothetical protein YPDSF_0215 238963 - 240333 + | hypothetical protein TERM 266 240838 - 240860 + T 72 -9.2 -3.19175 | CATGTAAGCGTATGG GGAGGATC ATTGTTG GATCCTCC TTGAATATATTACAA YPDSF_0216 241061 - 240870 - | hypothetical protein YPDSF_0217 241361 - 241137 - | hypothetical protein TERM 267 241392 - 241423 + r 93 -12.3 -3.0752 | overlap 241394 GTTGCTTGTGGTTAG CGGGGCTGAGGTG CTGATA CACCTCAACCCTG TGTTAAAATACTGTG TERM 268 241394 - 241421 + r 84 -11.3 -3.09289 | overlap 241392 TGCTTGTGGTTAGCG GGGCTGAGGTG CTGATA CACCTCAACCC TGTGTTAAAATACTG YPDSF_0218 241850 - 241443 - | transcriptional regulatory protein TERM 269 241717 - 241749 + g 70 -2.6 -4.95843 | opp_overlap 241721 TATTTATTGTACTGT GAAAGTTGCAAGCC AATAC GGGTCGCGACTTCC TTTTGTGTTTTATGT TERM 270 242103 - 242091 - g 75 -10.5 -3.39449 | opp_overlap 242089 242091 GCCGATGAACATCAA CCGGC CTC GCCGG TCTTGATAAAACAAA TERM 271 242091 - 242103 + G 71 -10.5 -3.13403 | opp_overlap 242091, overlap 242089 GCCGATGAACATCAA CCGGC CTC GCCGG TCTTGATAAAACAAA YPDSF_0219 242013 - 242189 + | hypothetical protein TERM 272 244177 - 244198 + G 73 -5.1 -4.65916 | gap 1, opp_overlap 244177, overlap 244179 CCGAGACGATCAAAG TGCGTCGCAG TAC CTGCG-CGAA TTTTATTCAGGTGAA YPDSF_0220 242211 - 244409 + | Rhs accessory genetic element YPDSF_0221 244412 - 244834 + | hypothetical protein TERM 273 244974 - 244946 - g 77 -10.2 -3.62096 | opp_overlap 244941, overlap 244964 CGGCATTACGTCAAA CCGCGCTGGG GCAACAGAG CCCGGCGCGG ACGGATTATCAGGTC TERM 274 248350 - 248338 - g 70 -4.7 -4.69027 | overlap 248327 248340 AAACGCAGCCAAAAA GACGG CTA CCGGC CACAGCTGTGGCGCT YPDSF_0222 244879 - 249417 + | membrane protein YPDSF_0223 249426 - 250220 + | hypothetical protein TERM 275 250225 - 250259 + T 100 -14.4 -5.14563 | opp_overlap 250228, overlap 250228 AACTGCCATAAATAA AAACCGGGAAGATCCT AAG AAGATCTTCCCGGTTG TTTTTTGATCGCCAG TERM 276 250228 - 250256 + T 100 -16.1 -4.67552 | opp_overlap 250228, overlap 250225 TGCCATAAATAAAAA CCGGGAAGATCCT AAG AAGATCTTCCCGG TTGTTTTTTGATCGC TERM 277 250256 - 250228 - T 100 -18.3 -5.38054 | opp_overlap 250228 250225 TGCCATAAATAAAAA CCGGGAAGATCCT AAG AAGATCTTCCCGG TTGTTTTTTGATCGC TERM 278 250507 - 250529 + T 100 -4 -6.14618 | opp_overlap 250508, overlap 250508 TTTTTAGTGATACAA AGTGACTGGT TTA GCCAGCCACA TTTTTTTGTTTTATA TERM 279 250508 - 250528 + T 75 -7.5 -4.25111 | opp_overlap 250508, overlap 250507 TTTTAGTGATACAAA GTGACTGGT TTA GCCAGCCAC ATTTTTTTGTTTTAT TERM 280 250528 - 250508 - T 80 -9 -4.0641 | opp_overlap 250508 250507 TTTTAGTGATACAAA GTGACTGG TTTAG CCAGCCAC ATTTTTTTGTTTTAT YPDSF_0224 251466 - 250567 - | hypothetical protein YPDSF_0225 252593 - 251463 - | oxidoreductase YPDSF_0226 252851 - 253729 + | AraC family transcription regulator YPDSF_0227 254394 - 253891 - | carbohydrate transport protein YPDSF_0228 255329 - 254400 - | carbohydrate kinase TERM 281 255158 - 255138 - G 82 -11.9 -3.58536 | AAATTCATGGCCAAA GGTGTCATC ACC GACGACACC CGCATAGGCGACCTC YPDSF_0229 256187 - 255486 - | deoxyribose-phosphate aldolase YPDSF_0230 256658 - 257239 + | NAD(P)H-dependent FMN reductase YPDSF_0231 257254 - 258390 + | alkanesulfonate transporter substrate-binding subunit YPDSF_0232 258409 - 259557 + | alkanesulfonate monooxygenase YPDSF_0233 259566 - 260363 + | aliphatic sulfonates transport permease protein TERM 282 260793 - 260817 + G 95 -11.3 -4.57882 | AACGTGTTGCACTGG CGCGGGCGCTG ATC CATCGCCCCCG TTTATTGTTGTTGGA ssuB 260360 - 261175 + | aliphatic sulfonates transport ATP-binding subunit TERM 283 261628 - 261654 + T 72 -10.1 -2.84602 | gap 1, opp_overlap 261617, overlap 261623 261629 ACATCCATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCCCTGCC TERM 284 261629 - 261655 + T 84 -10.1 -3.74872 | gap 1, opp_overlap 261617, overlap 261623 261628 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCCCTGCCT TERM 285 261738 - 261755 + T 70 -2.7 -5.00884 | CGCCTTTTTATTCTT GGTGTAA CGCT TTGCATC TTTTTTAAAGCGGCT YPDSF_0235 261997 - 261794 - | DNA-damage-inducible protein TERM 286 262109 - 262068 - H 88 -11.1 -3.75015 | gap 1, opp_overlap 262059 262071 262072, overlap 262071 ATAACCTCCATTAAA TTAC-CCTTATTGTAGCTAC GAT GTAGCTACAATAAGGTGTTT GAGCGATGTTTATTC TERM 287 262105 - 262071 - H 100 -17.4 -2.96873 | opp_overlap 262059 262071 262072, overlap 262068 ACCTCCATTAAATTA CCCTTATTGTAGCTAC GAT GTAGCTACAATAAGGT GTTTGAGCGATGTTT TERM 288 262071 - 262106 + H 100 -17.2 -3.58329 | gap 1, opp_overlap 262071 262068, overlap 262059 262072 ACCTCCATTAAATTA C-CCTTATTGTAGCTAC GAT GTAGCTACAATAAGGTG TTTGAGCGATGTTTA TERM 289 262072 - 262104 + H 100 -20.9 -3.36341 | opp_overlap 262071 262068, overlap 262071 262059 CCTCCATTAAATTAC CCTTATTGTAGCTAC GAT GTAGCTACAATAAGG TGTTTGAGCGATGTT TERM 290 262623 - 262636 + G 72 -8.1 -3.86346 | opp_overlap 262613, overlap 262622 GCAAAGCCGGTTTCC CACCG ACGG CGGTG TTTGTCGCGACCTGC TERM 291 263352 - 263375 + G 70 -4.6 -4.64657 | gap 1, opp_overlap 263334, overlap 263355 GCGGTGGTAAAGCGC TGACCACTGAC TCC GTCAGTAG-CA TTTTTGCGGGTTTGG YPDSF_0236 262451 - 263806 + | xanthine/uracil permease TERM 292 263958 - 263994 + F 76 -9.3 -3.45514 | overlap 263957 263949 TAATAACAATTGGTT GCAGGCATCGGGGGGGA TTA TCCTCCCCGATGTGAAC TTAATGTTATATATC YPDSF_0237 264155 - 265804 + | putative Na(+)/H(+) exchanger protein TERM 293 265816 - 265834 + T 100 -12.4 -3.61268 | TTAATATCTTACGGA CGGGGCTA ATT TGGCCCCG TTTACCGATTACATG YPDSF_0238 267209 - 266022 - | hypothetical protein TERM 294 266587 - 266619 + g 86 -8.4 -4.74801 | opp_overlap 266587 266586 ATGGGTTCACCAAAG GCGGTGACTAACGC ATTTC GCGTTAATGGCCGC TTTTTGCTCAGATTA YPDSF_0239 268350 - 267361 - | lipid A biosynthesis palmitoleoyl acyltransferase YPDSF_0240 269088 - 270077 + | periplasmic binding protein YPDSF_0241 270281 - 271777 + | ABC transporter ATP binding protein TERM 295 271794 - 271811 + G 71 -5.5 -4.55118 | opp_overlap 271786 CTAAAACTGCGCCAA CTCACGG GGCA CCATGAG TTTTATCTCGGGTTG YPDSF_0242 271770 - 272759 + | branched-chain amino acid transport system, permease component YPDSF_0243 272761 - 273714 + | ABC transporter, permease protein YPDSF_0244 273733 - 275370 + | carbohydrate kinase YPDSF_0245 275367 - 275972 + | phosphosugar isomerase/binding protein TERM 296 276006 - 276031 + T 100 -7.5 -5.72616 | gap 1, opp_overlap 276006 CGCGTGAAAGAGAAA CACCGCAACGGT ATG GCCGC-GCGGTG TTTTTTTATGTCAGT TERM 297 276031 - 276006 - T 86 -9 -4.32857 | gap 1, opp_overlap 276006 CGCGTGAAAGAGAAA CACCGCAACGG TATGG CCGC-GCGGTG TTTTTTTATGTCAGT TERM 298 276103 - 276124 + T 70 -3.6 -4.85599 | TTTTTTCAGCACTCT GAGCCTGC ACTAAG GCCGGTTC TTTTTATCAGGTCAG YPDSF_0246 277016 - 276162 - | putative glutathione S-transferase YghU TERM 299 276556 - 276535 - G 74 -7.9 -4.20883 | opp_overlap 276550, overlap 276550 276551 TAAAAATGCCCAAAA CCGCCCCCT AAAT AAGGGGCTG CACCTTGTAGCCAGA TERM 300 276640 - 276622 - G 71 -6.7 -4.1552 | opp_overlap 276610 GATTTCGGTAAGAAA TGACCGA ATTTA TCGGCCA AATAAAGCAGAATGG YPDSF_0247 277267 - 278613 + | hypothetical protein TERM 301 278637 - 278682 + T 88 -6.8 -5.12707 | opp_overlap 278637 278636 ATCTTTCCTGACAAG CCCGGGTATGAACTGTCC AACTTTATGG GGCCAGTCCATGCGCGGG TTTTTTACGCTTTAA YPDSF_0248 279895 - 278720 - | hypothetical protein TERM 302 278777 - 278792 + g 81 -6.2 -5.04082 | overlap 278783 CTCAAGAATGTTAAG TGTCTT GGAT AAGACA TTTTCTTGTTCTTTG TERM 303 279794 - 279778 - G 73 -2.9 -4.93296 | overlap 279779 279782 CCATGACGATAAAAA CCAGCAC AGG GTCCTGA GTCTCACTTTTAAGA TERM 304 280130 - 280151 + H 71 -4.4 -4.82901 | opp_overlap 280133, overlap 280133 GTCATAGGCACAAAA AAACCTGC ACGGAG GCAGGTTC TTTTTGTGCCCAGAA TERM 305 280148 - 280133 - H 100 -6.1 -5.65177 | opp_overlap 280130 280133 ATAGGCACAAAAAAA CCTGC ACGGAG GCAGG TTCTTTTTGTGCCCA TERM 306 280133 - 280148 + H 74 -6.1 -4.52873 | opp_overlap 280133, overlap 280130 ATAGGCACAAAAAAA CCTGC ACGGAG GCAGG TTCTTTTTGTGCCCA TERM 307 280187 - 280169 - H 100 -16 -4.36914 | opp_overlap 280169 TTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC TERM 308 280169 - 280187 + H 100 -16 -3.07307 | opp_overlap 280169 TTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC YPDSF_0249 280300 - 280758 + | transposase for the IS1541 insertion element TERM 309 280836 - 280860 + T 100 -9.9 -4.47456 | opp_overlap 280839, overlap 280838 280839 ATAGGCGCATATGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTATTCGGTAT TERM 310 280838 - 280858 + T 100 -12.5 -3.83566 | opp_overlap 280839, overlap 280836 280839 AGGCGCATATGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTATTCGGT TERM 311 280857 - 280839 - T 100 -16 -4.8048 | opp_overlap 280839 280838 280836 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTATTCGG TERM 312 280839 - 280857 + T 100 -16 -2.89055 | opp_overlap 280839, overlap 280838 280836 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTATTCGG YPDSF_0250 281153 - 280941 - | major cold shock protein Cspa2 YPDSF_0251 281625 - 281413 - | major cold shock protein Cspa1 YPDSF_0252 281870 - 282067 + | hypothetical protein TERM 313 282123 - 282087 - T 78 -10.3 -3.33162 | gap 1, overlap 282088 TACGGCATTTGATAA CCAGTCCGTAGGCATG GGCTAT CA-GCCTACAGACTGA AAACTGGGGTTAACG TERM 314 282122 - 282088 - T 80 -11.6 -2.59683 | gap 1, overlap 282087 ACGGCATTTGATAAC CAGTCCGTAGGCATG GGCTAT CA-GCCTACAGACTG AAAACTGGGGTTAAC YPDSF_0253 282625 - 282158 - | outer membrane lipoprotein YPDSF_0254 283101 - 283913 + | hypothetical protein YPDSF_0255 283978 - 284868 + | 2-hydroxy-3-oxopropionate reductase YPDSF_0256 285046 - 285441 + | gamma carboxymuconolactone decarboxylase YPDSF_0257 285595 - 286959 + | metabolite transport protein YPDSF_0258 287049 - 287711 + | GntR family transcriptional regulatory protein YPDSF_0259 287777 - 288253 + | hypothetical protein TERM 315 288977 - 288952 - T 89 -6.8 -5.32882 | opp_overlap 288952 CATTATTATAAAAAA GGCGCTAACC AATTAA GGATAACGCC TTTTTAAACAACACC fis 289303 - 289007 - | DNA-binding protein Fis YPDSF_0261 290293 - 289328 - | tRNA-dihydrouridine synthase B TERM 316 290818 - 290843 + r 100 -19.1 -2.52464 | opp_overlap 290807, overlap 290807 AAAGGTGAGTTGTGA CGCACACGGAC TCAA GTCCGTGTGCG TCAGTTAAGGCAAAA prmA 291773 - 290859 - | ribosomal protein L11 methyltransferase TERM 317 290892 - 290921 + g 71 -7.2 -3.99324 | AATGCGGCACCATTC TTCTTTCTCGGC GACTGG GTCGAGAATGAA TTTATCCTCATAGGC TERM 318 291060 - 291092 + g 77 -9.2 -4.09685 | gap 1, opp_overlap 291053 CAGAATATTGGCCAC GACCACGTCAGCAGA TAGT TCTGCGGGC-TGGTC TTTTGCCAGATACAG TERM 319 291757 - 291788 + g 88 -15.9 -2.77148 | overlap 291755 291752 291750 GCAATTCTCTCAAGC GCCGGTATCGGGG CCATAA CCACGATACCGGC TGATGTGTTGATAGA panF 293270 - 291816 - | sodium/panthothenate symporter TERM 320 293151 - 293137 - G 73 -5.6 -4.66938 | ATCGCCAATACAAAA CCGCCC ATC GAACGG TTGCCGATAAAATAT YPDSF_0264 293502 - 293260 - | hypothetical protein TERM 321 294640 - 294619 - R 75 -2.3 -5.40004 | overlap 294620 GAGCAAATTAAAAAA TTTCAGCTT AAAT AAACTGAAG GTAAGATATACGGCT TERM 322 294735 - 294703 - R 86 -12.1 -3.20435 | opp_overlap 294704, overlap 294704 TTAATTAGCCATCAA GGCCTGAATTCCGCA CTC TACAGAATTCAGGCT TTTTAACTTCAGTTT TERM 323 294704 - 294734 + r 100 -11.2 -4.75776 | opp_overlap 294703 294704 TAATTAGCCATCAAG GCCTGAATTCCGCA CTC TACAGAATTCAGGC TTTTTAACTTCAGTT TERM 324 294734 - 294704 - R 100 -15.6 -2.5194 | opp_overlap 294704, overlap 294703 TAATTAGCCATCAAG GCCTGAATTCCGCA CTC TACAGAATTCAGGC TTTTTAACTTCAGTT TERM 325 294805 - 294764 - R 100 -15.3 -5.26316 | opp_overlap 294764, overlap 294765 TTATGCCATAAAAAA CTGCCCCCCAATATCAGGT TATT ATCCAATATTGGGGGGCAA TTCAATTAACCGGCC TERM 326 294764 - 294805 + r 79 -10.9 -3.17075 | opp_overlap 294764 294765 TTATGCCATAAAAAA CTGCCCCCCAATATCAGGT TATT ATCCAATATTGGGGGGCAA TTCAATTAACCGGCC TERM 327 294804 - 294765 - R 100 -16.6 -3.75067 | opp_overlap 294764, overlap 294764 TATGCCATAAAAAAC TGCCCCCCAATATCAGGT TATT ATCCAATATTGGGGGGCA ATTCAATTAACCGGC YPDSF_0265 296209 - 294860 - | acetyl-CoA carboxylase biotin carboxylase subunit YPDSF_0266 296730 - 296221 - | acetyl-CoA carboxylase biotin carboxyl carrier protein subunit TERM 328 296502 - 296523 + g 80 -12.3 -3.40403 | GTGCTGGGGCGACGG CGGCAGCCA GCGC TGGCTGCTG TTGTGGTGCAGCAAA YPDSF_0267 297295 - 296843 - | 3-dehydroquinate dehydratase YPDSF_0268 298178 - 297558 - | putative sulfite oxidase subunit YedZ YPDSF_0269 299260 - 298178 - | putative sulfite oxidase subunit YedY TERM 329 298564 - 298529 - G 74 -7.4 -4.14257 | opp_overlap 298530 GCCAACAACCATAAA GGCCAGCGGGTGCATG GCTT CATCCAACCGCAGCCC TTCGACATAGGGGTA TERM 330 298590 - 298604 + g 74 -4.2 -4.82901 | opp_overlap 298574 GGGTAGTCCAGTCCC CCGC CAATAAA GCGG TTTTTCTGCCCAGGC TERM 331 299379 - 299411 + r 89 -12 -3.26947 | opp_overlap 299374 299373 AATATGAAATTTCTA CCACCGAGGCAAGT GTGAA ACTGACCTCGGTGG TTGCTGTAACGATTA YPDSF_0270 300460 - 299483 - | zinc-binding dehydrogenase TERM 332 300612 - 300599 - H 84 -3.8 -5.4433 | AGACAGAAATAAAAA CCCT GTGTTA AGGG TGAGCCAATATAGCG TERM 333 300988 - 300973 - g 76 -5.4 -4.77165 | TGTGCCAGAAGAAAA TGGAAC AACG GCTCCA AAGTATTGTGACCGC YPDSF_0271 300861 - 302774 + | regulatory protein CsrD TERM 334 302776 - 302766 - f 84 -2.6 -5.63517 | TCCGGAAAGAAAAAA TATT CGT AATA GGGCCATGTTAGCCT TERM 335 303343 - 303358 + G 73 -6 -4.55295 | opp_overlap 303342 303344, overlap 303344 TTCGTCCAATGAAAG ACGGCG TTAT CGCCGA TTTCTTTGTCACGGA TERM 336 303357 - 303344 - g 74 -9.5 -3.54146 | opp_overlap 303344 303343, overlap 303342 TCGTCCAATGAAAGA CGGCG TTAT CGCCG ATTTCTTTGTCACGG TERM 337 303344 - 303357 + G 70 -9.5 -3.32695 | opp_overlap 303342 303344, overlap 303343 TCGTCCAATGAAAGA CGGCG TTAT CGCCG ATTTCTTTGTCACGG YPDSF_0272 303111 - 304154 + | rod shape-determining protein MreB YPDSF_0273 304358 - 305353 + | cell wall structural complex MreBCD transmembrane component MreC YPDSF_0274 305350 - 305838 + | rod shape-determining protein MreD YPDSF_0275 305846 - 306445 + | Maf-like protein YPDSF_0276 306435 - 307904 + | ribonuclease G TERM 338 309529 - 309508 - g 80 -10.1 -4.07687 | opp_overlap 309512 AGCCGTGGCTGAAAA TACTGGCGG GCAT CCGCCTGTA TGATGCCACCGATGC TERM 339 310466 - 310445 - g 73 -3 -4.96848 | gap 1 GCCGCTAGATAAAAA CAGCGGTCA GGCAT TG-CCACTG CATGTTCAGGTGAAC YPDSF_0277 307998 - 311921 + | hypothetical protein YPDSF_0278 311918 - 312787 + | carbon-nitrogen hydrolase YPDSF_0279 312799 - 314244 + | protease TldD TERM 340 314271 - 314324 + T 73 -10.5 -2.50699 | overlap 314269 AATACAATATGGGTA TTAGGCTTTGTTGGCACTGCATTTG ATAC TAAATTTAGTGCCAACAAAGCATCG GTATATTAGTTAACC TERM 341 314403 - 314431 + T 100 -19.1 -3.67976 | opp_overlap 314403 314405 TATTACGGGTATAGA CACCTTCCCTATT CAA AATAGGGAAGGTG TTTAAAATTAATAAA TERM 342 314431 - 314403 - T 100 -19.1 -2.88861 | opp_overlap 314403, overlap 314405 TATTACGGGTATAGA CACCTTCCCTATT CAA AATAGGGAAGGTG TTTAAAATTAATAAA TERM 343 314429 - 314405 - T 100 -15.9 -2.99471 | opp_overlap 314403, overlap 314403 TTACGGGTATAGACA CCTTCCCTATT CAA AATAGGGAAGG TGTTTAAAATTAATA YPDSF_0280 317305 - 314447 - | insecticidal toxin TERM 344 316908 - 316883 - G 73 -3.1 -4.96848 | opp_overlap 316883 316884 316904, overlap 316884 TGTGGCATAGAAAAA GCGGTCGGTAA CCGT TTTCAGGCCGC CTTTGGCTTGCTCGT YPDSF_0281 320287 - 317330 - | insecticidal toxin TERM 345 317371 - 317358 - G 71 -6.7 -4.14627 | opp_overlap 317356 TTGCTATATAAATAA CGTGA GTAT TCACG TGCTGCTTTTATGTC TERM 346 319773 - 319748 - G 73 -3.1 -4.96848 | opp_overlap 319748 319769 TGTGGCATAGAAAAA GCGGTCGGTAA CTGT TTTCAGGCCGC CTTTGGCTTGCTCGT YPDSF_0282 320739 - 320371 - | hypothetical protein YPDSF_0283 321128 - 320727 - | hypothetical protein YPDSF_0284 321443 - 321141 - | hypothetical protein TERM 347 321563 - 321537 - R 71 -9.4 -2.90941 | opp_overlap 321529, overlap 321526 ATGACAGGGTATAGA GCCTGACCGG GAAGGGG CCGGTTAGGC TCTGCGGCTAATATT YPDSF_0285 326067 - 321577 - | insecticidal toxin complex TERM 348 325191 - 325209 + g 73 -6 -4.5442 | AGAAGGCGTCCTGAC GGAAATTC CAG GATTTTCC TTTTATGATTACCGG TERM 349 326083 - 326102 + r 83 -11.4 -3.06796 | opp_overlap 326071, overlap 326071 326085 AAAGGGCTCTCCTAT CAGGCCCT CTGT GGGGCCTG TTGACTGAGGTAACG YPDSF_0286 329717 - 326124 - | toxin subunit TERM 350 326172 - 326183 + g 78 -2.2 -5.34309 | GATGTCGCTCAGGCT TTGC AGCA GCAG TTTTTGTTTGCTAGT TERM 351 326981 - 326996 + g 70 -4.7 -4.59511 | opp_overlap 326983 GGCCTTGCTCTAACT CAGCT AAATTC AGCTG TTTTTGCGCCATATT TERM 352 329659 - 329689 + g 73 -2.7 -4.93877 | gap 1, overlap 329667 329671 TTAGCAAGATAGTAG TTAACCAAT-GCGT CGCG GCGCGATTCGTTAA TTTTATTTAATACAG YPDSF_0287 332259 - 329758 - | insecticidal toxin TERM 353 329845 - 329855 + gH 83 -5.4 -5.18355 | TATTTTAATTATGGT TCCA GGA TGGA TTTTTAATTTTTCAG YPDSF_0288 332239 - 332334 + | hypothetical protein TERM 354 332438 - 332466 + Tr 78 -9.1 -3.84185 | TTTTTATTGTTATCT TCTGTTTAACTAA ATT TTAGTTAAACAAA TTGTATTTAACTACG YPDSF_0289 333361 - 332495 - | LysR family transcriptional regulator YPDSF_0290 334533 - 333622 - | putative DNA-binding transcriptional regulator TERM 355 334898 - 334912 + G 86 -5 -5.22768 | GATATTTCTTGAGCT GCTAAT TTC ATTGGC TTTGTTTTTTGTTGT YPDSF_0291 334836 - 335039 + | hypothetical protein YPDSF_0292 335047 - 335982 + | p-hydroxybenzoic acid efflux subunit AaeA YPDSF_0293 335984 - 337939 + | p-hydroxybenzoic acid efflux subunit AaeB TERM 356 338078 - 338100 + F 71 -7 -4.22858 | opp_overlap 338082, overlap 338082 CGGTTCGAGCCCTCA TAAAGGCGCT CAC GGCGTCTTTG TTATTTCTCTCTTCT TERM 357 338082 - 338096 + F 75 -5.6 -4.65458 | opp_overlap 338082, overlap 338078 TCGAGCCCTCATAAA GGCGCT CAC GGCGTC TTTGTTATTTCTCTC TERM 358 338442 - 338423 - g 79 -7.8 -4.56597 | overlap 338389 338424 CTGCCTGGCGAAAAA CGCCCGCT AAAC AGCGAGCA GAGATTTTACAGCGT YPDSF_0294 338206 - 339339 + | hypothetical protein YPDSF_0295 339336 - 339674 + | succinate-semialdehyde dehydrogenase YPDSF_0296 339869 - 340342 + | ribonuclease YPDSF_0297 340347 - 340628 + | ribonuclease inhibitor TERM 359 340698 - 340745 + T 100 -10.5 -5.75342 | gap 1, opp_overlap 340700 GATTACGCCCGCCAA CAGTATTGAGTCGGGAGCCGGG AGTGA CCCGGC-CCCGCCCGATTACTG TTTTTTTTCAGCCAG TERM 360 340743 - 340700 - T 71 -9.5 -3.02144 | gap 1, opp_overlap 340698 TTACGCCCGCCAACA GTATTGAGTCGGGAGCCGGG AGTGA CCCGGC-CCCGCCCGATTAC TGTTTTTTTTCAGCC YPDSF_0298 341288 - 340740 - | hypothetical protein TERM 361 341051 - 341063 + g 70 -4.7 -4.71318 | overlap 341048 341051 CAATTAACTGGAGCT GGCGG CGG CGGCC TTCTTTTTTGATCTT TERM 362 341051 - 341066 + g 78 -2.4 -5.30189 | overlap 341048 341051 CAATTAACTGGAGCT GGCGGC GGCG GCCTTC TTTTTTGATCTTCTG TERM 363 341228 - 341238 + g 84 -2.4 -5.54907 | CCCAGATAATCTCAT CGTC ATC GTCG TTTTTATTTTCTGGG TERM 364 341510 - 341496 - g 70 -10 -3.3344 | ACTCAAGTTGCAGAA CAGCGT AAA ACGCTG GAACAAGCTGTTGCA YPDSF_0299 341469 - 342809 + | peptidase PmbA TERM 365 342831 - 342875 + F 70 -5.1 -4.4773 | gap 2, opp_overlap 342840, overlap 342840 TCCTGTCATCTTACT GTTC-CAC-AACTCGCGGGTA GAAAA TACCCGCGAGTTTGTATGCGC TTTTCCTTGATATGA TERM 366 342840 - 342864 + F 100 -15.8 -4.08164 | opp_overlap 342840, overlap 342831 CTTACTGTTCCACAA CTCGCGGGTA GAAAA TACCCGCGAG TTTGTATGCGCTTTT TERM 367 342864 - 342840 - f 100 -15.8 -3.29511 | opp_overlap 342840 342831 CTTACTGTTCCACAA CTCGCGGGTA GAAAA TACCCGCGAG TTTGTATGCGCTTTT TERM 368 343545 - 343558 + G 71 -6.7 -4.24726 | TGTTTATATTAGATT CTGAC GTTG GTCAG TTTTACCCTTATTGT YPDSF_0300 343094 - 343702 + | hypothetical protein YPDSF_0301 343910 - 344296 + | cytochrome TERM 369 344421 - 344453 + T 100 -15.7 -3.83921 | opp_overlap 344414 344425 TATAAAAGTGAGCGA TAGAGGGTAATGGCC TGC GGCGGTTACCCTCTA TTATCTTCTATTACC YPDSF_0302 344930 - 344520 - | nucleoside diphosphate kinase regulator TERM 370 344864 - 344851 - G 74 -9.5 -3.54475 | overlap 344861 GTTGCGACCACAGAA CCGGC AAAA GCCGG TTGCGCTAGCAACGC TERM 371 344999 - 344967 - R 100 -14.1 -5.30339 | opp_overlap 344972 AGCAAAACATAAAAA CAACACCCCCACGCC ATA GGAGAGGGGGTGTTA GAAAATAGCTTAATG TERM 372 344972 - 344994 + r 76 -10.4 -3.03243 | opp_overlap 344967 AACATAAAAACAACA CCCCCACGCC ATA GGAGAGGGGG TGTTAGAAAATAGCT TERM 373 345198 - 345164 - R 73 -10 -3.02829 | TATATTTTGCGAATA CGGCTCCATCAGGACA TTT TGCACTGATGGAGTCA CCTATCACCGGCCCT YPDSF_0303 346950 - 345283 - | trehalose-6-phosphate hydrolase TERM 374 346297 - 346283 - G 87 -8.5 -4.84359 | overlap 346261 CCATCGGTATAAAAA CGGCG GCCAT CGCCG TCCAGATCATTAGGG TERM 375 347008 - 346975 - R 75 -5.9 -4.67353 | gap 1, overlap 346978 346979 TTATTCATTGAAAAA TGACCCCGCCAGACGA TCA CCG-CTGGCGGGAGAA CACAACTTATATCGA TERM 376 347005 - 346978 - R 89 -12 -3.26405 | gap 1, overlap 346975 346979 TTCATTGAAAAATGA CCCCGCCAGACGA TCA CCG-CTGGCGGGA GAACACAACTTATAT TERM 377 347004 - 346979 - R 91 -13.3 -2.55361 | gap 1, overlap 346978 346975 TCATTGAAAAATGAC CCCGCCAGACGA TCA CCG-CTGGCGGG AGAACACAACTTATA YPDSF_0304 348460 - 347045 - | trehalose(maltose)-specific PTS system components IIBC TERM 378 347565 - 347542 - G 70 -8.8 -3.65143 | overlap 347540 ACAGGAAACCAAATA GTGCCGCACC GACC GGTGCGAAAC TGCCGGTCATCACCG TERM 379 348311 - 348325 + g 76 -7.2 -4.32436 | overlap 348307 GCCTTTGACCATTGA GAGATT TTC AATCTC TTTTGGTGATGCTAT TERM 380 348764 - 348777 + r 79 -6.7 -4.66938 | opp_overlap 348764, overlap 348760 TTTATTTTTATGGAA TGGGA ACGT TCCCA TTTTGTATTGAAGAT treR 349824 - 348871 - | trehalose repressor TERM 381 349461 - 349476 + g 70 -9 -3.63073 | opp_overlap 349458 349455 AACCGAACAGGATCA CGCCAT CAAC ATGGCG TTGTTGCAGAATATG TERM 382 349955 - 349985 + r 88 -7 -5.15634 | opp_overlap 349955 CTGGCAGCATAGGAA TACCCTAACG AATTTTCTCAC CGTTAGGGTA TTTTTTACTGCGGTG YPDSF_0306 350534 - 350058 - | hypothetical protein TERM 383 350447 - 350457 + g 79 -6.8 -4.74706 | overlap 350454 TATCAGGTAATGGGA TGGC GAC GCCA TTTTTGGCTATTGCG TERM 384 350821 - 350782 - R 100 -15 -5.05113 | CGGAGAGAAATAAAA TCACCACATGCGGCTGGC GATA ACCCGCCGTATGCGGTGA TGGGGGAGGGATTAA YPDSF_0307 351219 - 350833 - | hypothetical protein YPDSF_0308 351824 - 351357 - | aspartate carbamoyltransferase regulatory subunit pyrB 352768 - 351833 - | aspartate carbamoyltransferase catalytic subunit TERM 385 352881 - 352865 - R 100 -13.7 -6.06529 | GACAGACAAAAAAAA GCCCCTC AAC GAGGGGC CTTACAGGATCGGTT YPDSF_0310 353378 - 353106 - | phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr) YPDSF_0311 354229 - 353375 - | hypothetical protein TERM 386 354308 - 354326 + r 74 -10.3 -2.60496 | overlap 354309 354311 TACAAACCGGGGTGT GGTGGGT GCGGA ACCCACC CTCTTTCGAGCCGCA YPDSF_0312 355017 - 354535 - | sugar-specific enzyme IIA component of PTS TERM 387 355045 - 355084 + r 100 -21.6 -2.88249 | opp_overlap 355034 355053, overlap 355053 TTAAGCGCTGTTTAC GCCAGATACCGGTGGGAA TAAA TATCCACCGGTATCTGGC TATGTAGCGAGTGTA YPDSF_0313 355308 - 355135 - | hypothetical protein TERM 388 355266 - 355277 + g 74 -4.4 -4.88646 | CATTCACATGTACCG TTGC TTCT GCAA TTTGTTTTACTTTTT YPDSF_0314 355422 - 355315 - | sigma N modulation factor YPDSF_0315 356879 - 355446 - | RNA polymerase factor sigma-54 TERM 389 355704 - 355694 - G 79 -6.8 -4.62336 | opp_overlap 355694 355687 ACTTCAGTTCAAAAA TCCC TCG GGGA CTGTGCAAGAATTTC YPDSF_0316 357666 - 356941 - | putative ABC transporter ATP-binding protein YhbG YPDSF_0317 358218 - 357673 - | hypothetical protein YPDSF_0318 358765 - 358202 - | hypothetical protein YPDSF_0319 359325 - 358762 - | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase YPDSF_0320 360507 - 359434 - | D-arabinose 5-phosphate isomerase YPDSF_0321 361505 - 360531 - | putative calcium/sodium:proton antiporter TERM 390 361103 - 361093 - G 70 -2.4 -4.9645 | overlap 361094 ATCAGAACAATAAAA GCGG CAG CAGC CAAGAGCAAGATGAC YPDSF_0322 361770 - 362588 + | putative ABC transporter ATP-binding protein YrbF YPDSF_0323 362806 - 363588 + | hypothetical protein YPDSF_0324 363593 - 364150 + | hypothetical protein YPDSF_0325 364163 - 364786 + | hypothetical protein TERM 391 364916 - 364892 - g 82 -12.2 -3.5764 | opp_overlap 364893 AACTGGATCGTGAAA CGCTGTTACC GCTTT GGCAACAGCG TGAAACCTTGCTGGC YPDSF_0326 364822 - 365124 + | anti-sigma B factor antagonist TERM 392 365163 - 365191 + F 84 -6.1 -5.04868 | gap 1, opp_overlap 365163 AGGTAAGATAATCAA GCTCCTGTGCAT AATGGC AT-CACAGGGGC TTTTCTTTAGTTTCA YPDSF_0327 365262 - 365525 + | BolA-like protein YPDSF_0328 365679 - 366941 + | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 393 367001 - 367025 + T 100 -8.6 -5.59879 | opp_overlap 367001 TTCGGTAAATAAAAA TGCCAGCC GGTGATTGG GGCTGGCA TTTTTTATGTTTATA TERM 394 367025 - 367001 - T 100 -8.6 -5.27335 | opp_overlap 367001 TTCGGTAAATAAAAA TGCCAGCC GGTGATTGG GGCTGGCA TTTTTTATGTTTATA YPDSF_0329 368273 - 367122 - | serine endoprotease TERM 395 368261 - 368287 + g 100 -15.2 -4.82901 | overlap 368262 AATAGCATGAGTTAG GCGGACACAGCA TCG TGCTGTGTCCGA TTTTTGTGCCCAGAA TERM 396 368262 - 368286 + g 100 -18.7 -3.49419 | overlap 368261 ATAGCATGAGTTAGG CGGACACAGCA TCG TGCTGTGTCCG ATTTTTGTGCCCAGA TERM 397 368323 - 368305 - H 100 -16 -4.36914 | opp_overlap 368305 TTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC TERM 398 368305 - 368323 + H 100 -16 -3.07307 | opp_overlap 368305 TTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC YPDSF_0330 368436 - 368894 + | transposase for the IS1541 insertion element TERM 399 368968 - 369000 + T 95 -11.3 -3.89614 | opp_overlap 368975, overlap 368972 368974 368975 CCTTATAGGCGCATA TGAAAAACCTCCGGC TAT GCCGGAGGATATTTA TTTCTGCAAATTAGC TERM 400 368972 - 368996 + T 100 -9.9 -4.55697 | opp_overlap 368975, overlap 368968 368974 368975 ATAGGCGCATATGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTTCTGCAAAT TERM 401 368974 - 368994 + T 100 -12.5 -3.88703 | opp_overlap 368975, overlap 368972 368968 368975 AGGCGCATATGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTTCTGCAA TERM 402 368975 - 368993 + T 100 -16 -2.92499 | opp_overlap 368975, overlap 368974 368972 368968 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTCTGCA TERM 403 368993 - 368975 - T 100 -16 -4.8048 | opp_overlap 368975 368974 368972 368968 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTCTGCA YPDSF_0331 370384 - 369011 - | protease TERM 404 369664 - 369692 + g 72 -9.7 -3.35992 | gap 1, opp_overlap 369666 AGCCGATACCGATAT TACCGCCA-CCT GGCGCA AGGATGGCGGTA TTAATTCCGATCAGT YPDSF_0332 371059 - 370655 - | cytochrome d ubiquinol oxidase subunit III TERM 405 371084 - 371095 + H 71 -4.4 -4.7629 | TTTTTTGACTTCATT GTTC AGCA GAAC TTTTTCACTTAATAA YPDSF_0333 371283 - 372410 + | hypothetical protein TERM 406 372465 - 372484 + F 81 -11.4 -2.76249 | AATGCTATTCTATGG CGGGCGAC ATTT GTCGTCCG TACTTAACATGTTTA TERM 407 372923 - 372906 - g 79 -5.5 -4.91712 | CTGAACGCAGAAAAA GTTGCTG TAAC CGGCAAC AAGCGTACAGACAAG rplM 372723 - 373151 + | 50S ribosomal protein L13 rpsI 373166 - 373558 + | 30S ribosomal protein S9 TERM 408 373595 - 373611 + F 100 -13.7 -5.64274 | opp_overlap 373595 GATTGATGGTAAAAA CCCGGTG TCT CACCGGG TTTTTTTATGCCTGA TERM 409 373611 - 373595 - f 100 -13.7 -4.62783 | opp_overlap 373595 GATTGATGGTAAAAA CCCGGTG TCT CACCGGG TTTTTTTATGCCTGA sspA 373932 - 374573 + | stringent starvation protein A TERM 410 375075 - 375040 - g 72 -9.6 -3.41602 | gap 1, opp_overlap 375067 TTCACCGGATGATAA GCCGCCGCAACCGCCAC GGA GTGGTGGCCGCC-CGGC ATTACGCGTGGTTAA YPDSF_0337 374579 - 375094 + | ClpXP protease specificity-enhancing factor TERM 411 375128 - 375156 + T 70 -5.2 -4.51238 | gap 1, overlap 375133 ATACAGGCTCTATCT C-TTCAGGGCGGC GTTA GCCGCCCTTATCG TTTCTGTTTTGTGCG TERM 412 375133 - 375150 + T 100 -14.1 -3.69613 | overlap 375128 GGCTCTATCTCTTCA GGGCGGC GTTA GCCGCCC TTATCGTTTCTGTTT YPDSF_0338 375732 - 375247 - | hypothetical protein TERM 413 376106 - 376143 + r 71 -6.9 -4.23647 | opp_overlap 376105 376111, overlap 376107 ATAAATAGAATAAAT AGAAAGGGCGGGTTC TGTGAATT GAACCCGCCCTAGCG TTTATTGAATGATTT TERM 414 376107 - 376142 + r 77 -10.4 -3.13104 | opp_overlap 376105 376111, overlap 376106 TAAATAGAATAAATA GAAAGGGCGGGTTC TGTGAATT GAACCCGCCCTAGC GTTTATTGAATGATT TERM 415 376138 - 376111 - R 100 -14.2 -4.48483 | opp_overlap 376107 376106, overlap 376105 TAGAATAAATAGAAA GGGCGGGTTC TGTGAATT GAACCCGCCC TAGCGTTTATTGAAT gltD 377591 - 376173 - | glutamate synthase subunit beta TERM 416 377133 - 377112 - G 84 -15.1 -2.8632 | overlap 377104 377102 TAATACATCAGCACA GGCCAGCCC GGCA GGGCCGGCC CCGATCACGGCCACA TERM 417 377439 - 377474 + g 78 -9.6 -3.89695 | opp_overlap 377433 377450 TTCACAGTACGGATT GCCGCAGGACAGGCAG CGAT CGGCCTGTGCTTTGGC TTGTGTTTCTGAGAA gltB 382058 - 377601 - | glutamate synthase subunit alpha TERM 418 381312 - 381334 + g 70 -9.8 -3.33419 | overlap 381311 381307 381326 GGCACGCGCCTTGGC CCATTGGCGG TTA CCGGCGATGG TGTTGATTTCGCCGT TERM 419 383497 - 383487 - g 79 -6.8 -4.60924 | opp_overlap 383492 GAAACCTTGGAAAAA GTGG TCA CCAC CGGTGTTGATGGGAT YPDSF_0341 382860 - 383804 + | hypothetical protein YPDSF_0342 384068 - 386404 + | aerobic respiration control sensor protein ArcB TERM 420 386425 - 386402 - f 93 -4.4 -5.81032 | overlap 386405 GAAGTTGAAAAAAAA TAACCCCGAC CGAG GCCGGGGTGC GCGAAGACTGCGCCA TERM 421 386422 - 386405 - f 100 -10.5 -4.96028 | overlap 386402 GTTGAAAAAAAATAA CCCCGAC CGAG GCCGGGG TGCGCGAAGACTGCG mtgA 387295 - 388020 + | monofunctional biosynthetic peptidoglycan transglycosylase TERM 422 388154 - 388199 + T 71 -6.8 -4.11363 | opp_overlap 388163, overlap 388194 GGTATCGATGTGGTG GATAAAAAACGGGCTTGGCG GTTTAG CGCTAAGCCCGTGATAAATC TTATTTAATCTTCTT TERM 423 388190 - 388163 - T 100 -12.7 -5.24129 | opp_overlap 388154 GTGGTGGATAAAAAA CGGGCTTGGCG GTTTAG CGCTAAGCCCG TGATAAATCTTATTT YPDSF_0346 388802 - 388227 - | hypothetical protein TERM 424 388660 - 388702 + g 85 -7.6 -4.82901 | CTGGCTTCCAGTGTG CCGTCATCTACCTGCGTACC GAT GGTACGTGGATCCGTGGCGG TTTTTGTGGCAACCG YPDSF_0347 389403 - 388813 - | DnaA initiator-associating protein DiaA TERM 425 389585 - 389599 + r 77 -5 -5.00642 | opp_overlap 389585 TAAATGCTGTTCAAA TTGGTT CCA GACCAA TTTTTCTCTCGCTTG YPDSF_0348 390027 - 389674 - | hypothetical protein TERM 426 389799 - 389762 - G 71 -7.9 -4.07885 | gap 3, opp_overlap 389755 389787 389793, overlap 389790 GATGTTGTGGCAAAA CTGGC-GCCGC-GTTGTG CCAGC CA-AACAGCGGCGGCCAG ATGTAGCCGTTGTTG TERM 427 389947 - 389913 - G 78 -10 -3.82824 | CATCACGCATAATAA GGTCAATTTCGCCTCC ACG GAAGGCAACATTGGCC GCTTGAAAAACGAGA YPDSF_0349 392180 - 390111 - | hypothetical protein TERM 428 391731 - 391741 + gH 77 -8.2 -4.03995 | opp_overlap 391727 391726, overlap 391729 GGCAAGAATATCAGC CGCC GCT GGCG TATTTTTCTGCGCGA TERM 429 392082 - 392100 + gH 80 -2.5 -5.42259 | gap 1, opp_overlap 392082, overlap 392084 GAACGTTGAGGAAAG CAT-ACTG TATC CAGTGATG TTTTTTTCAAGATGC TERM 430 392949 - 392933 - gR 89 -7.2 -5.02074 | overlap 392934 TTACCGCTGAAAAAA GCCGCC GCATT AGCGGC AGAAATTCATGGAGT TERM 431 392951 - 392934 - gR 82 -10.5 -3.60762 | overlap 392933 TACCGCTGAAAAAAG CCGCCGC ATTA GCGGCAG AAATTCATGGAGTCA YPDSF_0350 392147 - 393046 + | putative tetrapyrrole methylase TERM 432 393451 - 393476 + Tr 83 -11.9 -2.73124 | opp_overlap 393456 393457, overlap 393457 ACTCCACTCATTCCA CAAAATCCCGC TTCG GCGGGTTTTTG CTTTGGAGGATAGGG TERM 433 393471 - 393456 - TR 70 -6 -4.40358 | opp_overlap 393451 393457, overlap 393457 ACTCATTCCACAAAA TCCCGC TTCG GCGGGT TTTTGCTTTGGAGGA TERM 434 393470 - 393457 - TR 72 -9.5 -3.23733 | opp_overlap 393451 393457, overlap 393456 CTCATTCCACAAAAT CCCGC TTCG GCGGG TTTTTGCTTTGGAGG TERM 435 393457 - 393470 + Tr 100 -9.5 -4.98531 | opp_overlap 393457 393456, overlap 393451 CTCATTCCACAAAAT CCCGC TTCG GCGGG TTTTTGCTTTGGAGG TERM 436 393564 - 393589 + Tr 83 -11.9 -2.73124 | opp_overlap 393569 393570, overlap 393570 ACGCCACTCATTCCA CAAAATCCCGC TTCG GCGGGTTTTTG CTTTGGAGGATAGGG TERM 437 393584 - 393569 - TR 70 -6 -4.40358 | opp_overlap 393564 393570, overlap 393570 ACTCATTCCACAAAA TCCCGC TTCG GCGGGT TTTTGCTTTGGAGGA TERM 438 393583 - 393570 - TR 72 -9.5 -3.23733 | opp_overlap 393564 393570, overlap 393569 CTCATTCCACAAAAT CCCGC TTCG GCGGG TTTTTGCTTTGGAGG TERM 439 393570 - 393583 + Tr 100 -9.5 -4.98531 | opp_overlap 393570 393569, overlap 393564 CTCATTCCACAAAAT CCCGC TTCG GCGGG TTTTTGCTTTGGAGG TERM 440 393677 - 393702 + Tr 83 -11.9 -2.73124 | opp_overlap 393682 393683, overlap 393683 ACGCCACTCATTCCA CAAAATCCCGC TTCG GCGGGTTTTTG CTTTGCAGGATAGGG TERM 441 393697 - 393682 - TR 70 -6 -4.40358 | opp_overlap 393677 393683, overlap 393683 ACTCATTCCACAAAA TCCCGC TTCG GCGGGT TTTTGCTTTGCAGGA TERM 442 393696 - 393683 - TR 72 -9.5 -3.23733 | opp_overlap 393677 393683, overlap 393682 CTCATTCCACAAAAT CCCGC TTCG GCGGG TTTTTGCTTTGCAGG TERM 443 393683 - 393696 + Tr 100 -9.5 -4.98531 | opp_overlap 393683 393682, overlap 393677 CTCATTCCACAAAAT CCCGC TTCG GCGGG TTTTTGCTTTGCAGG TERM 444 393790 - 393815 + Tr 83 -11.9 -2.73124 | opp_overlap 393795 393796, overlap 393796 ACGCCACTCATGCCA CAAAATCCCGC TTCG GCGGGTTTTTG CTTTGCAGGATAGGG TERM 445 393810 - 393795 - TR 70 -6 -4.40358 | opp_overlap 393790 393796, overlap 393796 ACTCATGCCACAAAA TCCCGC TTCG GCGGGT TTTTGCTTTGCAGGA TERM 446 393809 - 393796 - TR 72 -9.5 -3.23733 | opp_overlap 393796 393790, overlap 393795 CTCATGCCACAAAAT CCCGC TTCG GCGGG TTTTTGCTTTGCAGG TERM 447 393796 - 393809 + Tr 100 -9.5 -4.98531 | opp_overlap 393795 393796, overlap 393790 CTCATGCCACAAAAT CCCGC TTCG GCGGG TTTTTGCTTTGCAGG TERM 448 393903 - 393928 + Tr 100 -11.9 -4.09685 | opp_overlap 393908 393909, overlap 393909 ACGCCACTCATGCCA CAAAATCCCGC TTTG GCGGGTTTTTG TTTTACACGATAGGG TERM 449 393923 - 393908 - TR 70 -6 -4.40358 | opp_overlap 393903 393909, overlap 393909 ACTCATGCCACAAAA TCCCGC TTTG GCGGGT TTTTGTTTTACACGA TERM 450 393909 - 393922 + Tr 100 -9.5 -5.45802 | opp_overlap 393908 393909, overlap 393903 CTCATGCCACAAAAT CCCGC TTTG GCGGG TTTTTGTTTTACACG TERM 451 393922 - 393909 - TR 72 -9.5 -3.23733 | opp_overlap 393909 393903, overlap 393908 CTCATGCCACAAAAT CCCGC TTTG GCGGG TTTTTGTTTTACACG YPDSF_0351 394687 - 393983 - | hypothetical protein YPDSF_0352 394949 - 395842 + | LysR family transcriptional regulator TERM 452 395902 - 395927 + T 75 -8.9 -3.6284 | AACGTTCGCTTGCTA CGCCCTTGGCC TTGG GGAAAAGGGCG TTTAGCGTGCTAATT YPDSF_0353 396959 - 395973 - | hypothetical protein TERM 453 397001 - 396979 - R 100 -8.5 -5.40072 | opp_overlap 397000 TCCCCCTTAAAAAAA TACCCTACC GGATG GATAGGGTA TCGCTGATATTAACT YPDSF_0354 397440 - 397045 - | hypothetical protein YPDSF_0355 398028 - 397744 - | hypothetical protein YPDSF_0356 398420 - 398025 - | hypothetical protein YPDSF_0357 398728 - 398423 - | hypothetical protein YPDSF_0358 398879 - 398733 - | hypothetical protein YPDSF_0359 399263 - 398883 - | hypothetical protein TERM 454 399457 - 399484 + r 91 -12 -3.4759 | overlap 399458 TGAGAGGAACGAGTT TGATACGGGGAG TCGA CTCCCCGTAGCG TTGATTATCCTAAGT TERM 455 399458 - 399483 + r 93 -13.3 -2.68072 | overlap 399457 GAGAGGAACGAGTTT GATACGGGGAG TCGA CTCCCCGTAGC GTTGATTATCCTAAG YPDSF_0360 399878 - 399489 - | hypothetical protein YPDSF_0361 400573 - 399875 - | DedA family membrane protein YPDSF_0362 401432 - 400851 - | lipoprotein YPDSF_0363 402427 - 401633 - | DNA-binding transcriptional repressor ExuR TERM 456 402006 - 402043 + g 70 -2.8 -4.81851 | gap 2, opp_overlap 402003, overlap 402009 TGGAATTTAAGATCC CATTGAGAGTCACGGAAG CGAT CTTCC-TGACGCGCA-TG TTTTTGAATTTCAAT TERM 457 402606 - 402639 + H 79 -11.1 -3.2115 | opp_overlap 402608 402613, overlap 402608 402613 GCGGATAACAGGAGA GATGAAAGCCCGATA AATT TACCGGGCTTTCATG TTAGTAGGTCATTTA TERM 458 402608 - 402637 + H 100 -13.7 -3.16264 | opp_overlap 402608 402613, overlap 402606 402613 GGATAACAGGAGAGA TGAAAGCCCGATA AATT TACCGGGCTTTCA TGTTAGTAGGTCATT TERM 459 402637 - 402608 - H 100 -15.9 -3.02381 | opp_overlap 402608 402606 402613, overlap 402613 GGATAACAGGAGAGA TGAAAGCCCGATA AATT TACCGGGCTTTCA TGTTAGTAGGTCATT TERM 460 402632 - 402613 - H 84 -10 -3.90358 | opp_overlap 402608 402606 402613, overlap 402608 ACAGGAGAGATGAAA GCCCGATA AATT TACCGGGC TTTCATGTTAGTAGG TERM 461 402613 - 402632 + H 74 -7.8 -3.95022 | opp_overlap 402613 402608, overlap 402608 402606 ACAGGAGAGATGAAA GCCCGATA AATT TACCGGGC TTTCATGTTAGTAGG YPDSF_0366 404739 - 406148 + | glucuronate isomerase TERM 462 407334 - 407305 - g 73 -2.9 -5.00616 | gap 1 GCTTTGTGGAAAAAA CCATTA-CGGAAGA GAT TGTTCCGGTATTGG ATCTGCCCGAAGACG YPDSF_0367 406347 - 407798 + | altronate oxidoreductase YPDSF_0368 407809 - 409299 + | altronate hydrolase TERM 463 409349 - 409390 + F 75 -8.7 -3.63559 | gap 1, opp_overlap 409350, overlap 409347 409350 CTGTTTTTTATGGAA ACGCACTTCCCCTTCACACT TTA AGC-TGTAGGGGGAGTGCGC TGTTTGCTTATTAAT TERM 464 409389 - 409350 - f 93 -12.2 -3.64703 | gap 1, opp_overlap 409349 409347 409350 TGTTTTTTATGGAAA CGCACTTCCCCTTCACACT TTA AGC-TGTAGGGGGAGTGCG CTGTTTGCTTATTAA TERM 465 409350 - 409389 + F 83 -12.2 -2.77051 | gap 1, opp_overlap 409350, overlap 409349 409347 TGTTTTTTATGGAAA CGCACTTCCCCTTCACACT TTA AGC-TGTAGGGGGAGTGCG CTGTTTGCTTATTAA YPDSF_0369 409452 - 409982 + | hypothetical protein TERM 466 410022 - 409998 - T 100 -9.9 -4.51812 | opp_overlap 410001, overlap 410000 410001 TTTGATAACAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCATATGCGCCTAT TERM 467 410020 - 410000 - T 100 -12.5 -3.86244 | opp_overlap 410001, overlap 409998 410001 TGATAACAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 468 410001 - 410019 + T 100 -16 -4.8048 | opp_overlap 410000 409998 410001 GATAACAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 469 410019 - 410001 - T 100 -16 -2.90662 | opp_overlap 410001, overlap 410000 409998 GATAACAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC YPDSF_0370 410558 - 410100 - | transposase for the IS1541 insertion element TERM 470 410689 - 410671 - R 100 -16 -3.07307 | opp_overlap 410671 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 471 410671 - 410689 + r 100 -16 -4.36914 | opp_overlap 410671 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 472 410734 - 410709 - R 100 -9.8 -5.60993 | opp_overlap 410709 CTGGGCACAAAAAAA TGCCAGTCAA ACTTAA CTGACTGGCA TTTTGCGTAGGTAAA TERM 473 410709 - 410734 + r 83 -9.1 -4.19817 | opp_overlap 410709 CTGGGCACAAAAAAA TGCCAGTCA AACTTAAC TGACTGGCA TTTTGCGTAGGTAAA YPDSF_0371 412078 - 410759 - | serine/threonine transporter SstT TERM 474 412194 - 412219 + r 76 -6.9 -4.44667 | gap 1 TGACTTTGGGTATAG CGCTCAAGCC GGAACGA GGC-TGAGCG TTTATTGTTCACACC TERM 475 412430 - 412409 - R 70 -3.7 -4.85653 | gap 1, opp_overlap 412428, overlap 412410 412411 TATATACAAAATAAA TGTGGGGCTA TGG TAGCCCCG-A TCGATAGATTGTAGT YPDSF_0372 413545 - 412550 - | MocA family oxidoreductase YPDSF_0373 414272 - 413763 - | hypothetical protein TERM 476 414467 - 414495 + r 100 -11.7 -4.431 | GGATTAGCGGTCTGT CGATACCTGCACC ATA GGCACAGGTATCG TTTTATCAATGGATA YPDSF_0374 417504 - 414511 - | autotransporter protein TERM 477 416449 - 416467 + g 70 -9 -3.55378 | overlap 416447 GATGTTAGAATCGCC TAGCATAT TCC ATATGCTA TGTTTATCGATAAAT TERM 478 416978 - 416996 + g 72 -3.8 -4.8543 | opp_overlap 416978 GAAACATAGAGAATA CCATTATC ACC GACAGTGG TTTTTGTGGCACTTC TERM 479 417868 - 417886 + H 100 -14.6 -3.54459 | opp_overlap 417882 417883 CTTGCGGTGTGGGTT CGCGCTTG GCA CAAGCGCG TTTAAAACGCATTAA YPDSF_0375 417973 - 419160 + | methyltransferase TERM 480 419169 - 419200 + T 100 -15.2 -3.85879 | overlap 419195 TTTCTAATCGGTATT TCACAGGGTGGGGT TTTC GCCACACCCTGTGA TTATTCTCAGTTCTA YPDSF_0376 421297 - 419276 - | 2,4-dienoyl-CoA reductase TERM 481 420311 - 420325 + g 70 -2.7 -4.82901 | overlap 420312 GTTAATTTCATCGGC CCGGC CCTGT GCCGC TTTTTGTACAAAAGC TERM 482 421339 - 421380 + r 82 -3 -5.4756 | gap 2 ACCATTATTGTTATA TCTCCGCCG-CC-CTTACTG AATC CAGCAAGTGGTCGGATGAGA TTTTTTATTCAAATT YPDSF_0377 422079 - 421510 - | acid-resistance membrane protein YPDSF_0378 423969 - 422470 - | kinase protein TERM 483 423925 - 423939 + g 73 -6.4 -4.4648 | CTCGTCAACGTACTG GATGGT TTC GCCATC TTTTGTCGTACAGGT YPDSF_0379 425734 - 424001 - | hypothetical protein TERM 484 424550 - 424568 + g 77 -8.8 -3.97388 | opp_overlap 424546 424532 CTCTCCGACAACCCG CTGGTCCT CGG GGGGCCAG TTTATAATCCGCTCT YPDSF_0380 426363 - 425734 - | hypothetical protein YPDSF_0381 426773 - 426393 - | hypothetical protein TERM 485 426871 - 426837 - R 100 -8.6 -5.626 | opp_overlap 426840, overlap 426840 GATGCGACAAAAAAA TAAGGCAAAGCGCC GTGAATG GGGGCTTTGCCTTT ACATTACAGTACCAA TERM 486 426868 - 426840 - R 100 -10.3 -4.89054 | opp_overlap 426840, overlap 426837 GCGACAAAAAAATAA GGCAAAGCGCC GTGAATG GGGGCTTTGCC TTTACATTACAGTAC TERM 487 426840 - 426868 + r 86 -10.3 -3.76125 | opp_overlap 426837 426840 GCGACAAAAAAATAA GGCAAAGCGCC GTGAATG GGGGCTTTGCC TTTACATTACAGTAC YPDSF_0382 427576 - 426875 - | hypothetical protein YPDSF_0383 428156 - 427515 - | tellurium resistance protein YPDSF_0384 428827 - 428189 - | tellurium resistance protein TERM 488 429720 - 429730 + G 70 -2.4 -5.04987 | overlap 429700 429726 ATGTGCGCTTATCTG CGCC CTC GGCC TTTTTTAGCCGTATT TERM 489 429979 - 429967 - g 73 -9.1 -3.6959 | overlap 429969 ACAGCAGGATTTAAA CAGCG GCA CGCTG GCGCTAAACGTCGTG YPDSF_0385 429542 - 431230 + | hemolysin activator protein TERM 490 432547 - 432520 - g 75 -9 -3.83205 | overlap 432521 ACCCTTGATATTAAA GCCCGTGGGCAG CTAA CCGCCCAAGGGA AAAATATTAGCGGCA TERM 491 432546 - 432521 - g 78 -12.5 -2.89602 | overlap 432520 CCCTTGATATTAAAG CCCGTGGGCAG CTAA CCGCCCAAGGG AAAAATATTAGCGGC TERM 492 435792 - 435777 - g 70 -2.4 -4.91712 | overlap 435779 435787 TGCAACGGATAAAAA CGGCAC ACTA GCGCTG TTGGCACCGGTAATT TERM 493 436092 - 436077 - g 79 -8.2 -4.4009 | CTGGACGGCAGAAAA CCCCGA TATT CCGGGG GGGCGTTATACTCAA TERM 494 436548 - 436518 - g 80 -9.6 -4.07133 | TACGGTGATAAACAA TGGGGCAGCACCCG GCG CGATTGTCGCCCCA CGTGATCGCGACAGC TERM 495 438122 - 438106 - g 78 -3.6 -5.14965 | overlap 438107 438108 ACCGGGACTAAAAAA GGGCTG CTCTC CAGCAC CACCACCCGCAGCGA TERM 496 440414 - 440432 + G 74 -9.5 -3.55444 | opp_overlap 440413 CACTGAGTACATTAG CCGCCGG GCTGG CCGGTGG TTTGACAGGTGACAG YPDSF_0386 431275 - 441162 + | adhesin YPDSF_0387 441454 - 441603 + | hypothetical protein YPDSF_0388 441658 - 441885 + | hypothetical protein YPDSF_0389 442430 - 443185 + | hemagglutinin/hemolysin YPDSF_0390 443249 - 443413 + | hypothetical protein YPDSF_0391 445966 - 443681 - | putative autotransporter protein YPDSF_0392 447021 - 446026 - | hypothetical protein YPDSF_0393 448502 - 447123 - | hypothetical protein TERM 497 447864 - 447876 + g 82 -4.1 -5.24129 | ATCAACGAAGTAGCC CAGTG ACG CATTG TTTTTTGTCGACCAA TERM 498 448948 - 448972 + G 71 -11.5 -2.79023 | opp_overlap 448958, overlap 448946 GTTGGCCCCTCTGGC TGCGCAAAATC AAC GATGTTGCGCA TGATTGCTGGCCTTG YPDSF_0394 448840 - 449943 + | transporter ATP-binding protein TERM 499 450742 - 450775 + G 76 -8.1 -4.26792 | overlap 450744 450772 ACAGCTACAGCCAGT CACGCTGTCCGCG GGTGACAG CGCAGACAGCGTA TTTTACGGTTTCTAT TERM 500 450744 - 450773 + G 80 -10.7 -3.72407 | overlap 450742 450772 AGCTACAGCCAGTCA CGCTGTCCGCG GGTGACAG CGCAGACAGCG TATTTTACGGTTTCT YPDSF_0395 450026 - 453379 + | hypothetical protein TERM 501 453452 - 453436 - f 72 -6.5 -4.36914 | opp_overlap 453436 TGTGGCGCTACAAAA GCCTGAG TGG CTCATGC TATAGTAAATTCCTT YPDSF_0396 453488 - 454474 + | LacI-family regulatory protein TERM 502 455737 - 455724 - g 70 -8.1 -3.66095 | AAAGTGGTACTGAAA GGGGA AATA TCCCC GGAACAAGCGGTTGC YPDSF_0397 454551 - 455795 + | sugar binding protein YPDSF_0398 455849 - 456730 + | permease protein TERM 503 457248 - 457261 + G 80 -2.3 -5.42259 | overlap 457249 457259 CAGGATCGATGGCGC AGGTG AATT CACCA TTTTTTTCAAGGTGG YPDSF_0399 456730 - 457548 + | permease TERM 504 457905 - 457921 + G 77 -12.3 -3.10164 | opp_overlap 457895 457892 ATTGATACCCGCTTC GTTGCCG AAG CGGCAAC TTGCCTGCTGGCTCG YPDSF_0400 457545 - 458060 + | hypothetical protein TERM 505 458831 - 458844 + G 70 -4.5 -4.70879 | overlap 458832 GAGGCAGGCGTTGGC TCGGT GATG ACCGG TTTTTGCGATTTCGG TERM 506 459432 - 459410 - g 70 -9.9 -3.18383 | gap 1 ATGTCGATCTATCAA TCCCTCTGCG CTAT CGCAG-GGGA GGTTAAGGTGATCAC YPDSF_0401 458111 - 460294 + | glycosyl hydrolase YPDSF_0402 461884 - 460358 - | hypothetical protein YPDSF_0403 463790 - 461889 - | membrane protein YPDSF_0404 464823 - 463774 - | multidrug resistance protein MdtN YPDSF_0405 465168 - 464833 - | hypothetical protein TERM 507 465073 - 465102 + g 71 -6.3 -4.39287 | opp_overlap 465073 CGCTATAGCCGATAA CAGGATCAATGGC CCAC GCCATAGCGCCTG TTTTGCTGTCGTTAA YPDSF_0406 465365 - 465165 - | hypothetical protein TERM 508 466222 - 466206 - g 80 -2.2 -5.44721 | opp_overlap 466206 AGCAGTGTAAAAAAA GCGG ATGTTGGTA CCGC TGTATTGGATCTCAT YPDSF_0407 466131 - 467363 + | aminotransferase TERM 509 467406 - 467416 + F 75 -2.4 -5.25699 | opp_overlap 467397 467396 AAATATGGCATTACT GCCG ATG CTGC TTTTTATTGTGTCGT YPDSF_0410 468822 - 469268 + | hypothetical protein TERM 510 469613 - 469603 - g 72 -4 -4.7497 | CTTATCCATGAAAAA TCTT GGG AAGA ACGTGATTTTATCAT YPDSF_0411 469402 - 470028 + | hypothetical protein YPDSF_0412 470044 - 470424 + | translational inhibitor protein TERM 511 470745 - 470761 + G 73 -2.9 -4.91511 | CCCGAGACGATGTAC CCCAGTG TGC CATTCGG TTTTTCTCATGCGGT TERM 512 470982 - 471007 + G 78 -6.1 -4.82901 | TCACCGGCGAATTTG GCCGCAATTTG CGCA CAAATCGGGGC TTTTTATGAGGGCGC YPDSF_0413 470709 - 471113 + | translational inhibitor protein YPDSF_0414 471630 - 471328 - | hypothetical protein YPDSF_0415 472606 - 471890 - | hypothetical protein YPDSF_0416 472768 - 473700 + | LysR family regulatory protein YPDSF_0417 474681 - 473902 - | transposase/IS protein TERM 513 474600 - 474614 + g 77 -11.4 -3.3506 | overlap 474613 CTGCCTGTTGTGACA GCGCAG GCG CTGCGC TTATAAGGCTTTCCA YPDSF_0418 475703 - 474681 - | transposase for insertion sequence IS100 TERM 514 475725 - 475707 - H 100 -13.2 -4.01078 | AAAAGTGACCATAAA CTCTCCTG AAT CAGGAGAG CAGATTACCCCCTGG YPDSF_0419 476110 - 476313 + | hypothetical protein YPDSF_0420 476247 - 476621 + | hypothetical protein YPDSF_0421 476776 - 476618 - | hypothetical protein TERM 515 476661 - 476676 + g 74 -4 -5.00616 | TGTGCCAGATTTTGT TTGAGT TGCT GCTCAA TTTTTTGCACAGAAA YPDSF_0422 477695 - 479077 + | hypothetical protein YPDSF_0423 479086 - 479556 + | hypothetical protein YPDSF_0424 479583 - 480038 + | hypothetical protein YPDSF_0425 480055 - 480345 + | hypothetical protein YPDSF_0426 480323 - 480661 + | hypothetical protein TERM 516 480869 - 480899 + T 100 -9.8 -4.93877 | opp_overlap 480872, overlap 480872 TATCCCAGAAATAAC AAAGGAGTTACGCT ATT AACGTAACTCCTTG TTTTATTTGGTGGCC TERM 517 480872 - 480896 + T 100 -11.5 -4.56436 | opp_overlap 480872, overlap 480869 CCCAGAAATAACAAA GGAGTTACGCT ATT AACGTAACTCC TTGTTTTATTTGGTG TERM 518 480896 - 480872 - T 100 -13.7 -4.63048 | opp_overlap 480872 480869 CCCAGAAATAACAAA GGAGTTACGCT ATT AACGTAACTCC TTGTTTTATTTGGTG TERM 519 481132 - 481156 + T 78 -4.2 -5.1963 | opp_overlap 481132, overlap 481122 TTATAGGAAAAAAAA TCCCGACACA AATAA TATGCCGGGA TTTTTATTACTTCAC TERM 520 481156 - 481132 - T 100 -8.6 -5.90981 | opp_overlap 481132 481122 TTATAGGAAAAAAAA TCCCGACACA AATAA TATGCCGGGA TTTTTATTACTTCAC YPDSF_0427 483005 - 481179 - | RNA polymerase sigma factor RpoD TERM 521 482282 - 482307 + g 80 -3.1 -5.24551 | overlap 482283 GCTTCAGAATTTCAG CGGCAGCATTC GCGT GATTGCGGCCA TTTTTCTTGATTTCC TERM 522 483115 - 483134 + r 81 -9.3 -3.87869 | GCTATAGCGGCATAT TGTGGGG AGTTGC CCCCACA TTTATCGGCAATTAA dnaG 484911 - 483163 - | DNA primase TERM 523 483321 - 483311 - G 74 -6.8 -4.37092 | overlap 483313 AGCGTGTCGACAAAA GTCG GTT CGAC CATATCCTCTACAAT TERM 524 484973 - 484946 - R 100 -13.4 -3.94823 | opp_overlap 484945 484946 CATAAACGAGAACAA GCCGCGCATTCC TTTC GGAAAGCACGGC CTTCGTATGCAACTA TERM 525 484946 - 484973 + r 76 -11.2 -2.55668 | opp_overlap 484946, overlap 484945 CATAAACGAGAACAA GCCGCGCATTCC TTTC GGAAAGCACGGC CTTCGTATGCAACTA rpsU 485262 - 485047 - | 30S ribosomal protein S21 TERM 526 486643 - 486657 + G 70 -9.2 -3.551 | TTGAGTGTGTCGGTG CGGCCG CGG TGGCCG TTATCTGAGTTACCA YPDSF_0430 485668 - 486681 + | O-sialoglycoprotein endopeptidase TERM 527 486698 - 486723 + T 100 -12.6 -3.47841 | overlap 486690 CAGAATGGCTGAGCG TGGCTGCGGC TGCGTT GCCGCAGTCA TTCTGATATGGGTGT TERM 528 486746 - 486785 + T 100 -12.1 -4.07885 | overlap 486753 ATGGGTGTCGAATGG CTGGGCGTGGCTGTGGC TGTGTT GCCGCAGCCATTCTCGG TTTTGGGGAAAACTA TERM 529 486753 - 486778 + T 100 -12.6 -3.52113 | overlap 486746 TCGAATGGCTGGGCG TGGCTGTGGC TGTGTT GCCGCAGCCA TTCTCGGTTTTGGGG YPDSF_0431 487448 - 486798 - | putative glycerol-3-phosphate acyltransferase PlsY folB 487556 - 487915 + | bifunctional dihydroneopterin aldolase/dihydroneopterin triphosphate 2'-epimerase TERM 530 488125 - 488147 + F 100 -8.4 -5.77632 | opp_overlap 488125 AAATTCTAAATAGAA CGGCACTGTT TTC AGCATTGCCG TTTTTTTGTGGTTTT YPDSF_0433 488189 - 489007 + | undecaprenyl pyrophosphate phosphatase TERM 531 489224 - 489206 - T 75 -8.8 -3.58343 | opp_overlap 489186 GGCAGGAGTCTGAAA CCCCTTGT TTT ACAGGGGG AAACGAACAGGGAGT cca 490481 - 489243 - | multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase TERM 532 490073 - 490051 - G 100 -12.7 -4.21275 | overlap 490062 CCAAGGTAGGCAAAA CGGGCGGCA AAGCG TGCCACCCG CAGAACGCGCAATGG YPDSF_0435 491264 - 490641 - | putative signal transduction protein TERM 533 492350 - 492366 + G 73 -5.1 -4.64657 | overlap 492339 492352 CGCTTTGGCTATGGT TCGCCAA TCG TTGGCTA TTTTTGGCGGTTTGG YPDSF_0436 491568 - 492875 + | hypothetical protein TERM 534 495514 - 495474 - g 82 -11.2 -3.73224 | gap 1 CTATTCGCCAGCAAA TTCTCTGCCGCCACCGCGA AGAT CCGCAGTTGCAGCAG-GAA GTCCGCGAAATGCGG YPDSF_0437 493046 - 495901 + | bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase TERM 535 496226 - 496239 + G 70 -9.5 -3.18681 | ATATTGCCTCCCTTG GCGCG GTTG CGCGC TTAGTCGGGTTGACC YPDSF_0438 496036 - 497466 + | bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase TERM 536 497488 - 497471 - f 86 -12.7 -2.52464 | GCCGCGGCTAAGTCA GCGCCAG AGCG CTGGCGC ATAAGGATGTGGCAG TERM 537 497560 - 497578 + G 76 -5.2 -4.8048 | overlap 497561 GGGTTGTTATCCACT TCCCTGTT GGG GACGGGGG TTTTTGCTGTGCCAG YPDSF_0439 497503 - 498753 + | inner membrane protein YjeH TERM 538 498873 - 498899 + T 72 -10.1 -2.88849 | gap 1, opp_overlap 498862, overlap 498868 498874 ACATCCATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCTCTGCC TERM 539 498874 - 498900 + T 84 -10.1 -3.82218 | gap 1, opp_overlap 498862, overlap 498868 498873 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCTCTGCCT YPDSF_0440 499359 - 499078 - | hypothetical protein ribB 499928 - 500581 + | 3,4-dihydroxy-2-butanone 4-phosphate synthase YPDSF_0442 501023 - 501805 + | hypothetical protein TERM 540 501928 - 501964 + T 74 -10.3 -2.57564 | opp_overlap 501937, overlap 501927 501932 501936 GGCAATGACTTTGGG TATGGTAAAGGAAGGTG CAT TGCCTTCCCTTACTATA ATTATCCCAAAATAA YPDSF_0443 503126 - 501966 - | hypothetical protein TERM 541 503140 - 503161 + r 73 -7.3 -4.23723 | gap 1 ATTAATCAGCCTTAG CCACC-CATG CTA CGTGTGGTGG TTTTGGATGATGTTG YPDSF_0444 503822 - 503136 - | hypothetical protein TERM 542 504090 - 504056 - R 100 -10.6 -5.09895 | overlap 504060 GAGGGAGGCAAAAAA TAAACCGGGCGCAGCC AAT GACTGTGCCCGGTGAA GCCAAACCGCTGACG TERM 543 504086 - 504060 - R 100 -15.8 -5.0666 | overlap 504056 GAGGCAAAAAATAAA CCGGGCGCAGCC AAT GACTGTGCCCGG TGAAGCCAAACCGCT tolC 505520 - 504123 - | outer membrane channel protein TERM 544 504905 - 504890 - G 74 -6.8 -4.30987 | opp_overlap 504903 ATTCGGGATAATAAA CACCAG TAAT CTGGCG CAAGCTCTCTAGTGC nudF 505916 - 506548 + | ADP-ribose pyrophosphatase NudF YPDSF_0447 506582 - 507007 + | hypothetical protein YPDSF_0448 507016 - 507915 + | cyclic 3',5'-adenosine monophosphate phosphodiesterase YPDSF_0449 507915 - 508496 + | esterase YqiA TERM 545 509807 - 509771 - g 90 -8 -5.00616 | opp_overlap 509771 509770, overlap 509775 GTGGTGCGTAAAAAA CTGACCAG-TGGCCCGGC ACT GCCTGGCAAACTGG-CAG ATTGTACTTCGCAGG YPDSF_0450 508598 - 510493 + | DNA topoisomerase IV subunit B YPDSF_0451 510497 - 511408 + | LysR family regulatory protein TERM 546 511459 - 511433 - T 100 -17.3 -4.4715 | GGGTAACGTATAAAA CGGCCCTCCCC AGAGA GAGGAGGGCCG AACCGCTTAGCTGTT YPDSF_0452 512050 - 511466 - | modulator of drug activity YPDSF_0453 512371 - 512123 - | hypothetical protein TERM 547 512579 - 512552 - gH 84 -4.8 -5.22039 | gap 1, overlap 512553 GCTAAATTCAAAAAA TCAGCCCGT-ACC GTG GGTGACGTGCTGG GTAAATATCATCCGC TERM 548 512578 - 512553 - gH 73 -8.3 -3.72139 | gap 1, overlap 512552 CTAAATTCAAAAAAT CAGCCCGT-ACC GTG GGTGACGTGCTG GGTAAATATCATCCG TERM 549 513143 - 513107 - gH 95 -8 -5.00616 | gap 1, overlap 513110 513112 GCGGTGTGGAAAAAA GAAGATGGCAGCGCCGT GATC ACGGCGTTACCA-CATC AGGTTTCCGGCGCGA TERM 550 513140 - 513110 - gH 91 -8.3 -4.61482 | gap 1, overlap 513107 513112 GTGTGGAAAAAAGAA GATGGCAGCGCCGT GATC ACGGCGTTACCA-C ATCAGGTTTCCGGCG TERM 551 513139 - 513112 - gH 100 -12 -3.91465 | overlap 513110 513107 GTGGAAAAAAGAAGA TGGCAGCGCCGT GATC ACGGCGTTACCA CATCAGGTTTCCGGC TERM 552 513567 - 513582 + GH 74 -4.6 -4.81249 | opp_overlap 513566 513567 AAGATGATCCTAAAC CGCTAC TGAT GCAGCG TTTTTCCATTTCGGA YPDSF_0454 512354 - 514627 + | DNA topoisomerase IV subunit A TERM 553 515351 - 515328 - g 73 -3.2 -5.04987 | AACAGGTGCAAAAAA GAAACATC TCTATTTG GATGTTCC CAGAAGGCACACGCA YPDSF_0455 514916 - 515647 + | acyltransferase YPDSF_0456 515816 - 515637 - | hypothetical protein TERM 554 515682 - 515692 + g 72 -8.2 -3.89695 | overlap 515675 CAGGCTATCGCGGCC CCGC GCG GCGG TTATATTTATCGCCA TERM 555 515959 - 515970 + G 100 -7.2 -5.47399 | TATTAGAATCTCGCC GCGG CCAA CCGC TTTTTTTAACCTTGC YPDSF_0457 515826 - 517250 + | repressor protein for FtsI TERM 556 517381 - 517393 + F 78 -9.1 -3.83409 | CGCATGTCTCGCTTG CCTGC TTC GCAGG TTTACTGATATGTAC TERM 557 518219 - 518195 - g 71 -5.8 -4.36914 | CTGCGGGTGAGAAAA TTACGGATAT TCAGG ATGTCCGTAA CACCGTTGTGATGCG YPDSF_0458 517558 - 519105 + | hypothetical protein YPDSF_0459 519090 - 519902 + | hypothetical protein TERM 558 519920 - 519890 - T 86 -7.7 -4.71061 | gap 1 ATCCAGAGGGAAAAA CAGGC-AGCATTAA GGGG TTATTGCTGGCCTG AAATCAGCGGTCAGA dkgA 520757 - 519924 - | 2,5-diketo-D-gluconate reductase A TERM 559 520802 - 520827 + H 71 -3.4 -4.99645 | overlap 520796 GTATTAGCCCGTTGC TGATAACG TAAGTTTAGT CGTTATCA TTTTATTTATGACCT YPDSF_0461 520904 - 521113 + | hypothetical protein TERM 560 521092 - 521122 + T 93 -9.7 -4.2558 | opp_overlap 521089 GTATAAACAGGAGGA CTGGCAGCATGAC ATGCG GTAATGCCGCCAG TTTTGGTACGAGATA TERM 561 521183 - 521173 - T 76 -6.8 -4.55721 | AAATCTTACATAAAA CGGT TAT ACCG CCGCTTCATAGATAC YPDSF_0462 522333 - 521176 - | iron-containing alcohol dehydrogenase TERM 562 522240 - 522257 + g 71 -6.9 -4.21631 | opp_overlap 522238 522240 CGTAGGTAATCAATA TCCGGGC ATCC GCCGGGA TTTCTTGAGTCAATT TERM 563 522432 - 522444 + H 80 -4.8 -5.17353 | CGTAACCACATCACT GTGC CTGGA GCAC TTTTTTCGTCAATAT YPDSF_0463 522731 - 523624 + | AraC family transcription regulator TERM 564 523669 - 523685 + T 75 -5.8 -4.65916 | opp_overlap 523669 AAGGCTTCATAGAAA CGGCGT ATTAG ATGCCG TTTTATTCACCTGGA YPDSF_0464 524378 - 523716 - | DedA family membrane protein YPDSF_0465 525782 - 524571 - | cystathionine beta-lyase TERM 565 525614 - 525638 + g 86 -5 -5.2696 | gap 1, overlap 525617 CATAGAACAACTCAC CATTGCCCCGA TTGA TCGTGGCA-TG TTTTTTCGCTTTTAC TERM 566 525617 - 525636 + g 74 -7.8 -4.24654 | overlap 525614 AGAACAACTCACCAT TGCCCCGA TTGA TCGTGGCA TGTTTTTTCGCTTTT YPDSF_0466 526261 - 527298 + | MotA/TolQ/ExbB proton channel family protein YPDSF_0467 527308 - 527733 + | biopolymer transport protein ExbD TERM 567 527774 - 527734 - T 88 -9.7 -4.17316 | opp_overlap 527734 527735, overlap 527735 AGCGGCGCAAAATAA TTTTTTGCAAGCGCGGTTA CTG TTACCGCGCTTGCATCAAC TTTGGTTTTTGAGGA TERM 568 527734 - 527774 + T 93 -9.7 -4.32046 | opp_overlap 527734 527735, overlap 527735 AGCGGCGCAAAATAA TTTTTTGCAAGCGCGGTTA CTG TTACCGCGCTTGCATCAAC TTTGGTTTTTGAGGA TERM 569 527773 - 527735 - T 95 -13.2 -3.09908 | opp_overlap 527734 527735, overlap 527734 GCGGCGCAAAATAAT TTTTTGCAAGCGCGGTTA CTG TTACCGCGCTTGCATCAA CTTTGGTTTTTGAGG TERM 570 527735 - 527773 + T 95 -13.2 -3.18505 | opp_overlap 527735 527734, overlap 527734 GCGGCGCAAAATAAT TTTTTGCAAGCGCGGTTA CTG TTACCGCGCTTGCATCAA CTTTGGTTTTTGAGG YPDSF_0468 529371 - 527830 - | hypothetical protein TERM 571 529362 - 529342 - G 87 -4.8 -5.45652 | overlap 529343 ATTTTTAATAAAAAA CTCATACT TCTCT AGTATGAA AGTTATCATTGTTTT YPDSF_0469 529982 - 529410 - | hypothetical protein YPDSF_0470 530439 - 529966 - | hypothetical protein YPDSF_0471 531206 - 530436 - | hypothetical protein TERM 572 531178 - 531164 - G 80 -4.3 -5.0916 | CGCTTAACAGAAAAA TCATC ACTGG GATGA TAATAATAGTATTAA YPDSF_0472 532023 - 531190 - | hypothetical protein TERM 573 531399 - 531422 + g 86 -8.2 -4.67563 | opp_overlap 531398 531396 531399, overlap 531398 AGCCAAAACTAATAC TGTATTGCAG TGTG CTGCAAAACA TTTTCATTTCTATTG YPDSF_0473 532895 - 532020 - | hypothetical protein YPDSF_0474 534178 - 532892 - | type II secretion protein YPDSF_0475 535317 - 534190 - | hypothetical protein TERM 574 534769 - 534798 + g 100 -4.3 -5.96894 | overlap 534771 GAGATCTTGCGAGCC TTGATTGCCTTGT AATA ACAAGGTAGGCGA TTTTTTTATTTGGGT YPDSF_0476 536064 - 535615 - | outer membrane secretin family protein YPDSF_0477 536933 - 536079 - | hypothetical protein TERM 575 536416 - 536430 + g 74 -10 -3.57418 | opp_overlap 536415 536414 ATTTTATTAATAACC CCCTGA TAC TCAGGG TTGCTTTGATAACTC YPDSF_0478 537796 - 536930 - | hypothetical protein YPDSF_0479 538270 - 537848 - | hypothetical protein TERM 576 537892 - 537907 + g 73 -5.4 -4.70659 | gap 1 CAGTGATAGCAACGG CGTAGGG AAC CCC-ACG TTTTTGGATATCAAC TERM 577 538322 - 538296 - H 81 -9.5 -3.8594 | opp_overlap 538298, overlap 538298 AATAGTGAGATGAAA GATATGGCAGC AGATG GCTGCCATATT TATTGTGCCCAGAAA TERM 578 538298 - 538320 + H 100 -12.1 -4.30719 | opp_overlap 538296 538298 TAGTGAGATGAAAGA TATGGCAGC AGATG GCTGCCATA TTTATTGTGCCCAGA TERM 579 538320 - 538298 - H 91 -12.1 -3.51034 | opp_overlap 538298, overlap 538296 TAGTGAGATGAAAGA TATGGCAGC AGATG GCTGCCATA TTTATTGTGCCCAGA TERM 580 538357 - 538339 - H 100 -16 -4.37092 | opp_overlap 538339 ATTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC TERM 581 538339 - 538357 + H 100 -16 -3.07307 | opp_overlap 538339 ATTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC YPDSF_0480 538470 - 538928 + | transposase for the IS1541 insertion element TERM 582 539006 - 539030 + F 93 -9.9 -4.38927 | opp_overlap 539009, overlap 539008 539009 ATAGGCGCATATGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTCTATGAAAA TERM 583 539008 - 539028 + F 100 -12.5 -3.79864 | opp_overlap 539009, overlap 539006 539009 AGGCGCATATGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTCTATGAA TERM 584 539027 - 539009 - f 100 -16 -4.8048 | opp_overlap 539008 539006 539009 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTCTATGA TERM 585 539009 - 539027 + F 100 -16 -2.87195 | opp_overlap 539009, overlap 539008 539006 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTCTATGA YPDSF_0481 539281 - 541761 + | outer membrane usher protein TERM 586 541999 - 541977 - g 74 -4.1 -4.93316 | GAACAACAGCAAAAA GTCACCACC CCGTT AGTGGCAAC GCCACCAGTTCAGCG YPDSF_0482 541779 - 542498 + | fimbrial chaperone protein TERM 587 542976 - 542964 - T 74 -6.3 -4.5448 | CAGGGACAAAAATAA CGATT GCT AATCG AGTCACGGTCCAACT TERM 588 543811 - 543828 + T 71 -4.1 -4.87786 | TGTCAATAACCTCAA GCGAC CAATAAGT GTCGC TTTTTATGCCGTTAG YPDSF_0485 544919 - 543840 - | iron-enterobactin transporter periplasmic binding protein TERM 589 545790 - 545800 + G 91 -3.2 -5.72616 | ATGAATATTCTTTCC CTAC GCG GTGG TTTTTTTCTGTGGAT YPDSF_0486 545775 - 546770 + | hypothetical protein TERM 590 546836 - 546801 - T 100 -12 -4.39426 | opp_overlap 546798 546797 TACAGGGCCATAAAA TCGCCACAGTAATC TCATACTC GCTTACTGTGGCGA TCCCTCTTCTTCCGT YPDSF_0487 547440 - 546862 - | lipoprotein YPDSF_0488 547443 - 547565 + | hypothetical protein flhA 549730 - 547634 - | flagellar biosynthesis protein FlhA TERM 591 548576 - 548590 + g 77 -10 -3.74178 | overlap 548568 548570 548584 TCGCACGCCGCGTAG CCGTTG GTT CAACGG TTTACCCTTTGATTC flhB 550850 - 549717 - | flagellar biosynthesis protein FlhB TERM 592 550178 - 550195 + g 73 -2.7 -4.94243 | TTTTATGCTCTTGTT TGACC TCCTGTTT GGTCA TTTTCATTTTTTTGG TERM 593 550807 - 550817 + g 74 -4.6 -4.76312 | overlap 550800 550797 GCTTTCGACAGCTTC CCCG CTG TGGG TTTTTCACTCTTCTC YPDSF_0491 551623 - 550850 - | flagellar assembly protein YPDSF_0492 551902 - 551630 - | flagellar assembly protein fliP 552674 - 551904 - | flagellar biosynthesis protein FliP YPDSF_0494 553084 - 552671 - | flagellar switch protein TERM 594 552715 - 552727 + g 70 -3.4 -4.90266 | opp_overlap 552715 TATTGATGTTAATAA TACG CAGGC CGTA TTTTTCATTAATCAC YPDSF_0495 553976 - 553077 - | flagellar motor switch protein TERM 595 553318 - 553338 + g 88 -3.9 -5.67967 | ACTAAGTGTTCAAGT TGCCTCTCT GAC AGTGAGACA TTTTTTTCTACTGCT TERM 596 553553 - 553566 + g 76 -3.1 -5.1361 | AGAGATCGGTTATTT CAAGC CCGA GTTTG TTTTTTAGCCTTTCT TERM 597 554300 - 554315 + H 71 -3.4 -5.00234 | TTGGTGGTTAATGTT TTAAAT TTTT ATTTAA TTTATTTGTTTTTTA TERM 598 555074 - 555090 + G 74 -7.3 -4.258 | GGCCAGAGGATATTC TGCCTTT GGT GAAGGCA TTTATTAATAAGTAC YPDSF_0496 554491 - 555519 + | sigma-54 transcriptional regulatory protein YPDSF_0497 555536 - 555916 + | flagellar hook-basal body complex protein fliF 555926 - 557566 + | flagellar MS-ring protein fliG 557538 - 558581 + | flagellar motor switch protein G TERM 599 558618 - 558600 - g 82 -3.8 -5.252 | overlap 558602 GATGTTGATAAAAAA TACCCC ACGGGCG GGGGCA GTGAAACTGCGGGTT TERM 600 559264 - 559274 + G 73 -3.2 -5.00616 | CAATGCATTGGTGCG TTGC ACA GCAG TTTTTTGACGGAACC fliH 558586 - 559302 + | flagellar assembly protein H TERM 601 559349 - 559369 + G 77 -11.8 -3.15544 | opp_overlap 559345 ATCGAAAACATTCAT CTGGCCCG AGTGG CGGGCCGG TTAGTGCGAGTGACG fliI 559295 - 560623 + | flagellum-specific ATP synthase YPDSF_0502 560627 - 561064 + | hypothetical protein TERM 602 561124 - 561095 - T 100 -13.7 -5.67063 | opp_overlap 561095 GCGACCATAAAAAAA TCCGTCATAGGGA ATAT TCTCTATGACGGA TTTTTTATTGGGTGG TERM 603 561095 - 561124 + T 100 -15.9 -5.4833 | opp_overlap 561095 GCGACCATAAAAAAA TCCGTCATAGGGA ATAT TCTCTATGACGGA TTTTTTATTGGGTGG YPDSF_0503 561817 - 561392 - | hypothetical protein YPDSF_0504 562090 - 561824 - | flagellar regulatory protein flgA 563236 - 562319 - | flagellar basal body P-ring biosynthesis protein FlgA TERM 604 562380 - 562397 + g 76 -3.3 -5.17576 | overlap 562381 ACCGTGGCGGTCACC ACTCGGC CACT GCTGAGG TTTTTTACCTTGATA flgB 563264 - 563671 + | flagellar basal body rod protein FlgB flgC 563674 - 564099 + | flagellar basal body rod protein FlgC flgD 564102 - 564758 + | flagellar basal body rod modification protein TERM 605 565170 - 565186 + G 70 -11.5 -2.62184 | opp_overlap 565161 AAATTACAGGGCTAC CCGGCGG ATG CTGCCGG TAATATCCAGGCGGG flgE 564813 - 566054 + | flagellar hook protein FlgE TERM 606 566315 - 566305 - g 71 -5.4 -4.57073 | TATTGCCCTTAAAAA TCAG GGG CTGA TCGCGGTGCTCAGTG TERM 607 566601 - 566575 - g 76 -5.9 -4.73105 | gap 1 ACTCAGAAAAAACAA CCGCGGTTTACT GGTC AGTAA-CCGTGG CCCGGCGGCCCGTGA flgF 566054 - 566785 + | flagellar basal body rod protein FlgF flgG 566853 - 567638 + | flagellar basal body rod protein FlgG TERM 608 568154 - 568138 - g 79 -7.3 -4.56775 | ATCCGTGGCGAAAAA TGGCTGA CCC TCAACCA AGGCGATGAATATAT flgH 567673 - 568338 + | flagellar basal body L-ring protein TERM 609 569106 - 569134 + G 71 -6.6 -4.14541 | gap 1, opp_overlap 569116 ACGTTATGGTCAATG CGCCACAAGACGC CGGT GCG-CGCGTGGCG TTTATGTCATTGCTG flgI 568352 - 569527 + | flagellar basal body P-ring protein TERM 610 569581 - 569558 - g 74 -7.4 -4.26871 | gap 1, opp_overlap 569560 569561, overlap 569559 569561 GAAGCCATTAATAAA TCATCCCCGGT GAT ACCGGGGA-GT TTTGTCGGTGACCTC TERM 611 569580 - 569559 - g 71 -10.9 -3.154 | gap 1, opp_overlap 569560 569561, overlap 569558 569561 AAGCCATTAATAAAT CATCCCCGGT GAT ACCGGGGA-G TTTTGTCGGTGACCT TERM 612 569560 - 569580 + G 91 -11.1 -4.42653 | opp_overlap 569559 569558 569561, overlap 569561 AGCCATTAATAAATC ATCCCCGGT GAT ACCGGGGAG TTTTGTCGGTGACCT TERM 613 569579 - 569561 - g 86 -14.6 -3.12942 | opp_overlap 569560 569561, overlap 569559 569558 GCCATTAATAAATCA TCCCCGGT GAT ACCGGGGA GTTTTGTCGGTGACC TERM 614 569561 - 569579 + G 86 -14.6 -3.2511 | opp_overlap 569561 569559 569558, overlap 569560 GCCATTAATAAATCA TCCCCGGT GAT ACCGGGGA GTTTTGTCGGTGACC flgJ 569537 - 569830 + | peptidoglycan hydrolase flgK 569943 - 571304 + | flagellar hook-associated protein FlgK TERM 615 572107 - 572094 - g 80 -2.4 -5.44721 | ATTACTGCAAAAAAA CCAT GAAGAG ATGG AGCTGTCGAATGCCA flgL 571333 - 572256 + | flagellar hook-associated protein FlgL YPDSF_0517 572268 - 573281 + | hypothetical protein TERM 616 573362 - 573395 + T 82 -6 -5.00616 | gap 1, overlap 573363 573364 TACCCGTTATTCTTC AAGCTG-CATGTGCG TTGAT CGCACATGTCAGCCG TTTTTTCAGCCCCAG TERM 617 573363 - 573394 + T 78 -9.5 -3.60048 | gap 1, overlap 573362 573364 ACCCGTTATTCTTCA AGCTG-CATGTGCG TTGAT CGCACATGTCAGCC GTTTTTTCAGCCCCA TERM 618 573364 - 573393 + T 91 -13 -2.75708 | gap 1, overlap 573363 573362 CCCGTTATTCTTCAA GCTG-CATGTGCG TTGAT CGCACATGTCAGC CGTTTTTTCAGCCCC YPDSF_0518 573891 - 573445 - | hypothetical protein YPDSF_0519 574918 - 573872 - | regulatory protein TERM 619 574595 - 574583 - G 71 -5.5 -4.43859 | GATAATTTCACAAAA GCTGG CAT CCAAC AGATAACCTATCTTG TERM 620 575389 - 575373 - H 72 -7.3 -3.99805 | opp_overlap 575373, overlap 575378 575382 TCTTAAAAATTTAAA GCAGATT AAT AACCTGC GTTATTAAAATACTA YPDSF_0520 575544 - 576749 + | flagellin TERM 621 576776 - 576795 + F 81 -9.3 -3.87815 | CCTTCGCGTTGCAGG GGGGGTA CTCAGT TACCCCC TTTCTGCCACTCGAA TERM 622 576980 - 576955 - f 73 -9.7 -3.04715 | gap 1, overlap 576954 GACGCCCGCGAAAAG CGCGCTTGGGCA GGA TGCCC-ATCGCG ATGGCTCGTCAGCCC TERM 623 577048 - 577073 + F 100 -16.2 -2.52543 | overlap 577035 GCGCAAGCCGCAGGT GCAGGAGGGC CGGCTA GCCCTCCTGC TCGGTTGAGGCGGCT TERM 624 577206 - 577225 + F 100 -8.6 -5.9362 | opp_overlap 577206 CCATTAATAAATCGA TACCGCTT CTTG GAGCGGTA TTTTTTTGTATTTTA TERM 625 577242 - 577258 + F 85 -9.3 -4.09864 | overlap 577243 TTTTTTGTATTTTAT ACCGGGC ATG GCCCGGC TTTTGGGCGGTGGAT TERM 626 577243 - 577257 + F 95 -12.8 -3.05597 | overlap 577242 TTTTTGTATTTTATA CCGGGC ATG GCCCGG CTTTTGGGCGGTGGA TERM 627 577259 - 577289 + F 78 -9.7 -3.55622 | CGGGCATGGCCCGGC TTTTGGGCGGTGG ATAAC CTCCCGCCCAGAA TTTAAGAGAATTCAC YPDSF_0521 577308 - 578504 + | flagellin TERM 628 578545 - 578591 + F 100 -15.4 -3.05384 | gap 1, opp_overlap 578550, overlap 578550 578555 GGGGTACTCAGTGCA CTGAACC-CCAGATCTTGGAT CTTTTT ATCCATGATCTGGAGGTTCGG TTCAATGAAACACCC TERM 629 578550 - 578586 + F 77 -10.3 -3.19192 | gap 1, opp_overlap 578550, overlap 578545 578555 ACTCAGTGCACTGAA CC-CCAGATCTTGGAT CTTTTT ATCCATGATCTGGAGG TTCGGTTCAATGAAA TERM 630 578585 - 578550 - f 93 -12.7 -3.06915 | opp_overlap 578550 578545 578555 ACTCAGTGCACTGAA CCCCAGATCTTGGAT CTTTTT ATCCATGATCTGGAG GTTCGGTTCAATGAA TERM 631 578555 - 578565 + F 75 -5.4 -4.88736 | opp_overlap 578550, overlap 578550 578545 GTGCACTGAACCCCA GATC TTG GATC TTTTTATCCATGATC TERM 632 579931 - 579913 - g 71 -11 -2.73735 | overlap 579903 579901 579924 AAACAGGCGGAATGA GTCCGGCA GAA TACCGGAC TCAGGTAGAAAAGCA YPDSF_0522 579165 - 579950 + | transposase for insertion sequence IS1661 TERM 633 580909 - 580888 - g 71 -5.1 -4.44211 | gap 1, overlap 580889 580890 TTTAATACAAAAGAA CGCGTCAACG TCA CGGTGACG-G AAAAGGTCACGCTAA YPDSF_0523 580198 - 581622 + | Sodium:galactoside symporter TERM 634 581768 - 581813 + T 80 -10 -3.73914 | opp_overlap 581768 581773, overlap 581773 ATTGCCATAAACAAA TTATAGGGGC-TTGCGCAATGT CTTA ATTTTGCGCAAAGCCCCT-TAA TTATTGATGGGTGAT TERM 635 581813 - 581768 - T 82 -7.9 -4.55697 | opp_overlap 581768 581773, overlap 581773 ATTGCCATAAACAAA TTATAGGGGC-TTGCGCAA TGTCTTAATT TTGCGCAAAGCCCCT-TAA TTATTGATGGGTGAT TERM 636 581809 - 581773 - T 77 -10.3 -3.16414 | gap 1, opp_overlap 581768 581773, overlap 581768 CATAAACAAATTATA GGGGC-TTGCGCAA TGTCTTAATT TTGCGCAAAGCCCC TTAATTATTGATGGG TERM 637 581773 - 581809 + T 100 -12.4 -3.56142 | gap 1, opp_overlap 581773 581768, overlap 581768 CATAAACAAATTATA GGGGC-TTGCGCAATGT CTTA ATTTTGCGCAAAGCCCC TTAATTATTGATGGG YPDSF_0524 584061 - 581881 - | ferric siderophore receptor YPDSF_0525 585461 - 584133 - | siderophore biosynthesis protein IucD TERM 638 584584 - 584606 + g 70 -3.3 -4.8048 | gap 1, overlap 584576 TTGGTCAGTGAGCGG CTG-GGGAGC AGGC GCGCCCACGG TTTTTCATGTAACAC YPDSF_0526 587206 - 585458 - | siderophore biosynthesis protein IucC YPDSF_0527 588153 - 587203 - | siderophore biosynthesis protein IucB YPDSF_0528 589207 - 588137 - | siderophore biosynthesis protein, IucA familly TERM 639 588972 - 588994 + g 71 -11.3 -2.78032 | opp_overlap 588970 588969, overlap 588971 588970 GTTTGAGCCAAACGT GCCAAGCGC ATACC GCGTTTGGC CTCTTTTACCGACAG YPDSF_0529 589908 - 589300 - | hypothetical protein TERM 640 590820 - 590837 + G 71 -6.3 -4.42238 | gap 1, overlap 590809 590823 ATTCGGCCACCACGG TGAGCCAC CAC GTGGC-CA TTTTGCTTAGCATAG YPDSF_0530 590048 - 591271 + | hypothetical protein YPDSF_0531 592394 - 591561 - | hypothetical protein TERM 641 592597 - 592558 - R 100 -15.4 -5.93809 | opp_overlap 592532 592565 TTTTTATAAAAAAAA TGATAAATTTCATGCTTA ATTA TTAGCATGAAATTTATCA TAGGGAAGGGACAAT TERM 642 592565 - 592590 + r 74 -7.7 -3.96148 | opp_overlap 592558 AAAAAAAATGATAAA TTTCATGCTTA ATTA TTAGCATGAAA TTTATCATAGGGAAG YPDSF_0532 594129 - 592771 - | hypothetical protein TERM 643 593846 - 593864 + g 73 -11 -2.88579 | opp_overlap 593846 593844 593841 593848, overlap 593848 AGCGCTATAATCATA TAGCGTCC TGA GGGCGCTA TATCTGCCGGATTAG TERM 644 594459 - 594515 + H 70 -3.9 -4.78157 | gap 1, opp_overlap 594465, overlap 594465 GGAGCTAGACATTAT ATTAAATGCTACAGAAGTTCTACTTG CAGAAA CAGGT-GCACTTCTGTAGCATTTTCC TTTATTATTTTTGGT TERM 645 594465 - 594509 + H 100 -11.7 -4.71708 | gap 1, opp_overlap 594465, overlap 594459 AGACATTATATTAAA TGCTACAGAAGTTCTACTTG CAGAAA CAGGT-GCACTTCTGTAGCA TTTTCCTTTATTATT TERM 646 594509 - 594465 - H 86 -10.2 -3.88062 | gap 1, opp_overlap 594459 594465 AGACATTATATTAAA TGCTACAGAAGTTCTACTTGC AGAA ACAGGT-GCACTTCTGTAGCA TTTTCCTTTATTATT TERM 647 594665 - 594645 - H 74 -9.8 -3.15544 | opp_overlap 594636 594631 594645 CGGTAGTTGTACTAA GGTGCAAT TTCCT ATTGCACC TTAGTACAGTAAATG TERM 648 594645 - 594665 + H 74 -9.8 -3.16881 | opp_overlap 594645, overlap 594636 594631 CGGTAGTTGTACTAA GGTGCAAT TTCCT ATTGCACC TTAGTACAGTAAATG YPDSF_0533 594691 - 595434 + | quorum-sensing transcriptional regulator YPDSF_0534 596065 - 595415 - | N-acylhomoserine lactone synthase YspI TERM 649 595972 - 595988 + g 70 -2.2 -4.95957 | opp_overlap 595972 TCACCTCCCAGTTAA GACGAT CCTTA AACGTC TTTTTCCTTAATTTA YPDSF_0535 597610 - 597891 + | membrane protein YPDSF_0536 598342 - 598737 + | putative lipoprotein YPDSF_0537 598805 - 599068 + | insertion element protein TERM 650 599276 - 599266 - f 70 -2.6 -4.96773 | GGAATCAAAAATAAA TTTA TGT TAAA ACTAATTATTTTTAT TERM 651 599385 - 599396 + F 88 -3 -5.84011 | CAGAAGCGTTGGGAT GATA TTTA TATC TTTTTATTTTTTATT YPDSF_0538 601013 - 601513 + | hypothetical protein TERM 652 601601 - 601579 - g 71 -6.3 -4.34402 | gap 1, overlap 601580 GTCTGTACAGGAAAA CCGTGCGCAG GGTA CTGCG-ACGA CCGTATTAAAGAATA YPDSF_0539 601562 - 603106 + | hypothetical protein YPDSF_0540 603118 - 604470 + | hypothetical protein TERM 653 604757 - 604774 + G 74 -2.6 -5.09225 | overlap 604759 604760 CTTCGTGTGGTGCCA TTCGCC CTTACA GGCGCA TTTTTTCAATACCCT YPDSF_0541 604467 - 605153 + | membrane protein TERM 654 606240 - 606270 + G 77 -10.4 -3.61398 | GGGTGGCCTTTGATA TCCGTCAGTACCAC AGC GTGGCGATGACGGA TTATTCCCCGAAAGC YPDSF_0542 605153 - 606889 + | OmpA-family membrane protein YPDSF_0543 607351 - 606866 - | hypothetical protein YPDSF_0544 606893 - 607384 + | hypothetical protein TERM 655 607468 - 607487 + FH 100 -11.4 -5.69068 | opp_overlap 607471 AGGGTAACCCCGCAA GTAGGCGG TTCG CCGCCTGC TTTTTTGTGTTTTTA YPDSF_0545 607802 - 610450 + | Clp ATPase TERM 656 611619 - 611600 - g 70 -2.8 -4.8143 | gap 1, overlap 611592 611601 611602 TCAACAAGCCAAAAA TGGCCGGCA CCT TGCCCGC-A CGGGTCACCAGCACC YPDSF_0546 610447 - 612795 + | Rhs element Vgr protein TERM 657 613588 - 613578 - g 74 -6.8 -4.31329 | TGAAAAACTGGAAAA CACC GAT GGTG CAGATTACGAATACA TERM 658 614982 - 614969 - g 72 -3.9 -4.75288 | GTACAGTAAAAGAAA TTGAT AAAG ATCAA GCAGAAAGTGCCGAT YPDSF_0547 612811 - 615108 + | kinase TERM 659 615120 - 615139 + G 73 -3 -5.00616 | TTAAAAAATTGACAT TGAAATAT TTTT ATATTTTA TTTTTTACACCCCAC TERM 660 615237 - 615226 - g 74 -4.4 -4.84033 | AGACAAAAATGAAAA TGCA ATTT TGCA TGTAAAAAAAAACCA YPDSF_0548 615095 - 615862 + | hypothetical protein YPDSF_0549 615958 - 616233 + | insertion sequence protein YPDSF_0550 616287 - 616655 + | insertion sequence protein TERM 661 616908 - 616882 - f 71 -3.2 -5.01042 | opp_overlap 616898 AATTTAAAGGAAAAA TCATTACACAAA CTA TTTATATAATAA TTTTTTGTATAAGGA TERM 662 616898 - 616908 + F 76 -2.6 -5.36441 | opp_overlap 616882 CATTACACAAACTAT TTAT ATA ATAA TTTTTTGTATAAGGA YPDSF_0551 617263 - 617898 + | hypothetical protein TERM 663 618361 - 618335 - f 81 -7.2 -4.71776 | opp_overlap 618335 TAAGACGCAAGAAAA CCGAAGTTTGTC ATC GACATCCTCCGG TTTCTTCGTCCCGTA TERM 664 618516 - 618532 + F 76 -10.9 -2.62616 | opp_overlap 618515 618513 618510 TCGAACCAAGGACAC GGGGATT TTC AATCCCC TGCTCTACCGACTGA YPDSF_0553 619055 - 619207 + | hypothetical protein TERM 665 619602 - 619631 + GF 76 -4.3 -5.00884 | gap 1 ATGAATAACTCGACC TTTGCTTGCCCTGG CCA TCAGGG-GGGCGAA TTTTTTCGCAAGCAT TERM 666 619651 - 619661 + GF 74 -2.4 -5.1925 | TTCGCAAGCATCCTG CAGG ACG CCAG TTTTTTGAATTCTAC YPDSF_0554 619062 - 621389 + | ornithine decarboxylase TERM 667 621414 - 621443 + F 83 -11.5 -3.05521 | TCTCCGCTCCATCAG CCGAGGCCATT TTTTAATT GATGGCCTCGG TATTAAACATCTCAT YPDSF_0555 621945 - 622904 + | sugar ABC transporter periplasmic binding protein YPDSF_0556 622950 - 624449 + | sugar transport ATP-binding protein TERM 668 624564 - 624575 + G 84 -4.4 -5.35721 | TCCTGCTAGACAACT CAAC GACC GTTG TTTTTATTGTTATGT YPDSF_0557 624482 - 625465 + | sugar transport system permease protein YPDSF_0558 627692 - 625548 - | hydroxamate-type ferrisiderophore receptor TERM 669 626838 - 626873 + g 79 -11.1 -3.57792 | opp_overlap 626848 GGTGGCGTTATAGCT CTCGTCGAAACGGCG ATCACG CGGCGTGTCGACGGG TTTGCCAGTGCGTGG YPDSF_0559 628785 - 627685 - | hypothetical protein mltC 630172 - 629084 - | murein transglycosylase C TERM 670 629652 - 629676 + g 100 -9.4 -5.18371 | gap 1, opp_overlap 629652 ACGAACGAGATCACA TGCAAAC-CGG AAGT CCGTGTTTGCA TTTTGTTTTGTAGCA TERM 671 630339 - 630315 - R 83 -9.3 -4.015 | gap 1, opp_overlap 630312 630308 630318, overlap 630318 CTATTTAGGAAATAA CAGCGGGGCC TTAATT GGCCCCG-TG TGGTTACTTACTCGG TERM 672 630337 - 630318 - R 83 -12.1 -2.75069 | opp_overlap 630312 630308 630318, overlap 630315 TTTAGGAAATAACAG CGGGGCC TTAATT GGCCCCG TGTGGTTACTTACTC TERM 673 630318 - 630337 + r 86 -12.1 -2.97613 | opp_overlap 630318 630315, overlap 630312 630308 TTTAGGAAATAACAG CGGGGCC TTAATT GGCCCCG TGTGGTTACTTACTC YPDSF_0561 630615 - 630343 - | hypothetical protein YPDSF_0562 631911 - 630793 - | adenine DNA glycosylase trmB 632246 - 632965 + | tRNA (guanine-N(7))-methyltransferase YPDSF_0564 632965 - 633291 + | hypothetical protein TERM 674 633323 - 633340 + F 100 -9.8 -4.91852 | opp_overlap 633323 633322 633320 CTGATCATTAAACAG GGCGCC CTAACC GGCGCC TTTGTTTTTACTGGC TERM 675 633340 - 633323 - f 71 -9.8 -2.68493 | opp_overlap 633323, overlap 633322 633320 CTGATCATTAAACAG GGCGCC CTAACC GGCGCC TTTGTTTTTACTGGC YPDSF_0565 633402 - 634328 + | glutaminase YPDSF_0566 634440 - 634970 + | hypothetical protein YPDSF_0567 634928 - 635173 + | hypothetical protein TERM 676 635201 - 635179 - f 100 -9 -4.75472 | opp_overlap 635178 635177, overlap 635180 CTTAGAGTAATAAAA GGGGGGGGGA TAT TCCCCCTCCA AATTTAGAATCGCCA TERM 677 635200 - 635180 - f 100 -12.5 -3.4456 | opp_overlap 635178 635177, overlap 635179 TTAGAGTAATAAAAG GGGGGGGGA TAT TCCCCCTCC AAATTTAGAATCGCC TERM 678 637986 - 637975 - g 70 -3 -4.86731 | TTCCTTTAAACAAAA TGAT AAAA ATCA CCACCCACAATTTAT TERM 679 638038 - 638018 - g 76 -12.7 -2.57243 | overlap 638017 638015 638020 GTATTATTACAAGAT GACTCTCTT TCT AAGAGAGTC GGAGAGATTATTGCT TERM 680 639088 - 639069 - g 70 -10 -3.28447 | opp_overlap 639068 639069, overlap 639067 639070 TCATTGACGATAATA CTCACGCC GAGT GGCGTGAA ATTAGTCATAATGAA TERM 681 639087 - 639070 - g 70 -11.3 -2.56747 | opp_overlap 639069 639068, overlap 639069 639067 CATTGACGATAATAC TCACGCC GAGT GGCGTGA AATTAGTCATAATGA YPDSF_0568 635669 - 645001 + | virulence determinant TERM 682 645055 - 645028 - T 74 -9.8 -3.14961 | overlap 645026 645024 ATTAGCAGGAAGAGA GGCTGAGGGCAG GTTT CTGCCCTCAGAG ACACCAGTCATACTG YPDSF_0569 646333 - 645191 - | coproporphyrinogen III oxidase TERM 683 646012 - 645995 - G 70 -9.1 -3.56643 | opp_overlap 646009, overlap 645972 CTGATAGCCGCTAAA GCGATCG GCTT CGACCGC TCCGGGGTTGGCTTC YPDSF_0570 646907 - 646314 - | putative deoxyribonucleotide triphosphate pyrophosphatase YPDSF_0571 647297 - 647007 - | hypothetical protein YPDSF_0572 647848 - 647294 - | membrane protein TERM 684 647652 - 647642 - G 70 -3.2 -4.77036 | GGTCATCAGTAAAAA TGCC AAC AGCA ATGATGCGCTATCGA YPDSF_0573 648957 - 648136 - | pyrroline-5-carboxylate reductase YPDSF_0574 649788 - 649090 - | hypothetical protein TERM 685 649351 - 649387 + g 78 -13.1 -2.87527 | opp_overlap 649354, overlap 649355 ACTAATGCTGTCAGC CAAGGCGGGGAGTTC ACTCAAG GAAATCCCCGCTTTG CTTTGCTCATCACTG TERM 686 649355 - 649383 + g 84 -10.3 -4.11623 | opp_overlap 649354, overlap 649351 ATGCTGTCAGCCAAG GCGGGGAGTTC ACTCAAG GAAATCCCCGC TTTGCTTTGCTCATC YPDSF_0575 649808 - 650932 + | hypothetical protein TERM 687 651016 - 650989 - T 100 -15 -4.20783 | AGGTGATGCAATAAA TTAACCCGGATC GGAT GATCCGGGTCAA GCAGGCGGCTTATTT YPDSF_0576 652156 - 651041 - | agmatine deiminase YPDSF_0577 653044 - 652160 - | carbon-nitrogen hydrolase TERM 688 653086 - 653072 - R 95 -5.7 -5.59564 | ATAAATGTAAAAAAA CACCT GCAAG AGGTG TGCAATATTTTAAAC YPDSF_0578 653646 - 653224 - | Holliday junction resolvase-like protein YPDSF_0579 654209 - 653646 - | hypothetical protein YPDSF_0580 655284 - 654325 - | glutathione synthetase YPDSF_0581 656041 - 655310 - | hypothetical protein TERM 689 655844 - 655862 + g 74 -3.8 -4.9725 | opp_overlap 655856 CCATTGCCCTTCAGC GAGTCGGA CAA TCAGATTC TTTTTATCTGCCCGT YPDSF_0582 656082 - 656249 + | hypothetical protein YPDSF_0583 657000 - 656293 - | endonuclease I TERM 690 656763 - 656782 + g 84 -4.2 -5.31456 | gap 1, opp_overlap 656763, overlap 656766 656768 CATGTTCCCATTCAA T-CCGCGCG GCT CGCGCTGCA TTTTTTCTGGGTTGA TERM 691 656766 - 656778 + g 70 -10.5 -2.96157 | opp_overlap 656763, overlap 656763 656768 GTTCCCATTCAATCC GCGCG GCT CGCGC TGCATTTTTTCTGGG YPDSF_0584 657655 - 657098 - | hypothetical protein TERM 692 657727 - 657757 + r 100 -11.8 -3.81516 | opp_overlap 657727 GTGCATACAAATAAA CCACCCTGCCAGCG TGT TGCTTACAGGGTGG TTCTTCATCGTTTTA TERM 693 657757 - 657727 - R 100 -13.3 -4.62441 | opp_overlap 657727 GTGCATACAAATAAA CCACCCTGCCAGC GTGTT GCTTACAGGGTGG TTCTTCATCGTTTTA YPDSF_0585 658957 - 657803 - | S-adenosylmethionine synthetase YPDSF_0586 660164 - 662143 + | arginine decarboxylase TERM 694 662174 - 662193 + F 100 -8.6 -5.40072 | opp_overlap 662174 TCAGTATCGATTAAA GGGCAAAC TCAG GTTTGTCC TTTTTTTCGGCGCGA YPDSF_0587 662303 - 662623 + | Rieske protein TERM 695 662675 - 662702 + T 80 -9.8 -3.62046 | opp_overlap 662662 662676, overlap 662676 AACGTCAGCTACAGA ACTCACGCCCCA ACAG TGGGGAGTGAGG TTATTGACAAAGTGC TERM 696 662701 - 662676 - T 100 -13.3 -3.52102 | opp_overlap 662675 662676, overlap 662662 ACGTCAGCTACAGAA CTCACGCCCCA ACAG TGGGGAGTGAG GTTATTGACAAAGTG TERM 697 662676 - 662701 + T 93 -13.3 -2.77013 | opp_overlap 662662 662676, overlap 662675 ACGTCAGCTACAGAA CTCACGCCCCA ACAG TGGGGAGTGAG GTTATTGACAAAGTG TERM 698 662775 - 662801 + T 72 -10.1 -2.88849 | gap 1, opp_overlap 662764, overlap 662770 662776 ACATCCATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCTCTGCC TERM 699 662776 - 662802 + T 84 -10.1 -3.82218 | gap 1, opp_overlap 662764, overlap 662770 662775 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCTCTGCCT TERM 700 662860 - 662888 + T 72 -9.6 -3.14564 | gap 1, overlap 662863 GGGGTTTGTCAGCAG T-CTGACGCCCCA ACAG TGGGGCGTCTGCA TTGATAAGAGACTGG TERM 701 662863 - 662884 + T 100 -15.9 -2.56596 | overlap 662860 GTTTGTCAGCAGTCT GACGCCCCA ACAG TGGGGCGTC TGCATTGATAAGAGA YPDSF_0588 663665 - 662913 - | lipoprotein TERM 702 663045 - 663059 + g 86 -7 -5.0133 | GGTTACCAGACCGTT CGGGTC AAT GCCCCG TTTTTTCAGCAAATC TERM 703 663982 - 663992 + H 71 -4.6 -4.63218 | ATGGTTTGTCGTTGT GCGG TGG CTGC TTTTGTTCACCCCAA YPDSF_0589 664156 - 666150 + | transketolase TERM 704 666228 - 666201 - f 75 -5.6 -4.58663 | ATTAGCCGTTAAAAA GTCATTAACTGT TAAA ACAGGCAACGAC GTTATCAATACTGCA TERM 705 666291 - 666306 + F 100 -10.4 -5.93809 | opp_overlap 666291 ATGCACCTGTTAAAA GACCGC TTTT GCGGTC TTTTTTTTGTGCCCA TERM 706 666306 - 666291 - f 91 -10.4 -4.09864 | opp_overlap 666291 ATGCACCTGTTAAAA GACCGC TTTT GCGGTC TTTTTTTTGTGCCCA TERM 707 666327 - 666345 + F 100 -16 -3.07307 | opp_overlap 666327 TTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC TERM 708 666345 - 666327 - f 100 -16 -4.36914 | opp_overlap 666327 TTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC YPDSF_0590 666458 - 666916 + | transposase for the IS1541 insertion element TERM 709 666994 - 667018 + F 88 -9.9 -4.23045 | opp_overlap 666997, overlap 666996 666997 ATAGGCGCATATGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTGACTAATTC TERM 710 666996 - 667016 + F 100 -12.5 -3.70709 | opp_overlap 666997, overlap 666994 666997 AGGCGCATATGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTGACTAAT TERM 711 666997 - 667015 + F 100 -16 -2.81702 | opp_overlap 666997, overlap 666996 666994 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTGACTAA TERM 712 667015 - 666997 - f 100 -16 -4.8048 | opp_overlap 666997 666996 666994 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTGACTAA TERM 713 667059 - 667069 + F 70 -5.4 -4.49344 | overlap 667046 667053 TGTGCCCTTTTTCAG GGAA ATA TTCC TTTTATCATGACTTT TERM 714 667174 - 667153 - f 73 -5.8 -4.42653 | opp_overlap 667154, overlap 667154 667155 ATCCCACCGAGAAAA CCCGGCCA GTATTA TGGCCGAA TTGTGATAATACGAT YPDSF_0591 667257 - 668273 + | erythrose 4-phosphate dehydrogenase TERM 715 668922 - 668904 - g 100 -16 -3.56568 | opp_overlap 668896 668893 668921 GAAGCATTGGGTAAA GCGCTGGG TAA CCCAGCGC GTCCAATGGTTGCTA TERM 716 669298 - 669283 - g 76 -7.6 -4.31329 | opp_overlap 669291 TGAAAAATGCCAAAA CCATTC TGTG GAATGG TCCGGTTGGTGTGTT pgk 668376 - 669539 + | phosphoglycerate kinase YPDSF_0593 669659 - 670738 + | fructose-bisphosphate aldolase TERM 717 670759 - 670786 + F 100 -14.2 -3.62046 | opp_overlap 670766, overlap 670766 GTCTGTTCGGACTGA CCTAAAAGGCCC TACG GGGCCTTTGAGG TTATTGACAAAGTGC TERM 718 670766 - 670779 + F 78 -9.5 -3.72051 | opp_overlap 670766, overlap 670759 CGGACTGACCTAAAA GGCCC TACG GGGCC TTTGAGGTTATTGAC TERM 719 670779 - 670766 - f 85 -9.5 -4.19817 | opp_overlap 670759 670766 CGGACTGACCTAAAA GGCCC TACG GGGCC TTTGAGGTTATTGAC TERM 720 670859 - 670885 + F 72 -10.1 -2.88849 | gap 1, opp_overlap 670848, overlap 670854 670860 ACATCCATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCTCTGCC TERM 721 670860 - 670886 + F 84 -10.1 -3.82218 | gap 1, opp_overlap 670848, overlap 670854 670859 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCTCTGCCT TERM 722 670964 - 670951 - f 78 -9.5 -3.58343 | opp_overlap 670951 GTCAGCAGTCTGAAA GGCCC TACG GGGCC TTTTTTCGTTGCTGA TERM 723 670951 - 670964 + F 100 -9.5 -5.30155 | opp_overlap 670951 GTCAGCAGTCTGAAA GGCCC TACG GGGCC TTTTTTCGTTGCTGA TERM 724 671104 - 671123 + F 93 -4.2 -5.78622 | overlap 671092 GGCCGTTGGCTAGAG TCGCCAGC GTTA GATGGTGA TTTTTTTTGGCGTAA TERM 725 671141 - 671155 + F 100 -7.8 -5.26316 | TTTTTTGGCGTAATT GCTCCT GTA GGGAGC TTTTTTGTAGGATGG YPDSF_0594 671176 - 672045 + | membrane protein TERM 726 672096 - 672081 - f 72 -7.5 -3.97308 | opp_overlap 672081 GGTAAATAGATTAAA CGGGC CTCAGT GCCCG TTTTTACTCGCTCGG TERM 727 672081 - 672096 + F 85 -7.5 -4.7497 | opp_overlap 672081 GGTAAATAGATTAAA CGGGC CTCAGT GCCCG TTTTTACTCGCTCGG TERM 728 672756 - 672776 + G 76 -7.5 -4.30001 | overlap 672753 GCCCTTGGTTTGCTT TAGGGGCGG TTA CGGCCTCTA TTGTTTGGTTTTTTG YPDSF_0595 672308 - 672925 + | arginine exporter protein TERM 729 673330 - 673315 - g 79 -6.8 -4.64766 | TGCAGATGCCAAAAA GCAGGT CGAT ACCCGC GTCGCGCAATACTTT YPDSF_0596 673094 - 673894 + | hypothetical protein TERM 730 673910 - 673878 - T 71 -4.9 -4.64676 | CTACTGCCAATAAAA CAGTTGCTGCTCA GTAAACA TAAACAGCTACTG CCCAATAAACGAGTC YPDSF_0597 674813 - 673905 - | chromosome replication initiation inhibitor protein YPDSF_0598 675155 - 675811 + | ribose-5-phosphate isomerase A TERM 731 675815 - 675851 + F 71 -2.2 -5.22039 | overlap 675806 GTGATTGGCTAAAAT TTTTCAGGGTGTCGTT TATTT GGCTTCACCCTGATAA TTTTTTGCCTTTGAA TERM 732 676436 - 676470 + G 73 -12.2 -2.57974 | opp_overlap 676443, overlap 676431 TTCAATGCGCCTTTC TCCAATACCCGTTCGG TAG CCGAAATGGTATTGGG TGAGTTGCTGCTGAT TERM 733 677313 - 677303 - g 79 -6.8 -4.63542 | GATAATGCGGAAAAA GCCT TGC AGGC GATGAAGGCCATTCC YPDSF_0599 676118 - 677359 + | D-3-phosphoglycerate dehydrogenase TERM 734 677403 - 677377 - f 88 -10.8 -3.8901 | opp_overlap 677373 677372 CCTGAAATGATTAAA CGCCTGGGATCC ATA GGATCTCAGGTG TGAGGTTATTGACAA TERM 735 677482 - 677508 + F 72 -7.2 -3.9749 | gap 1, opp_overlap 677470, overlap 677481 CATCCATGTAGGCTC GAG-CCGCGCC CTCCCT GGCGCGGACGC TTTACTCTTCTGCCT TERM 736 677571 - 677597 + F 100 -22.4 -5.60993 | TTGTCAGCAGTCTGA CACCGGGGATCC ATA GGATCCCCGGTG TTTTTTTGTGCCCAG TERM 737 677617 - 677635 + F 100 -16 -3.07307 | opp_overlap 677617 TTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC TERM 738 677635 - 677617 - f 100 -16 -4.36914 | opp_overlap 677617 TTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC YPDSF_0600 677748 - 678206 + | transposase for the IS1541 insertion element TERM 739 678280 - 678312 + T 100 -11.3 -4.52589 | opp_overlap 678287, overlap 678284 678286 678287 CCTTATAGGCGCATA TGAAAAACCTCCGGC TAT GCCGGAGGATATTTA TTTTATCTCGAACGA TERM 740 678284 - 678308 + T 100 -9.9 -4.83243 | opp_overlap 678287, overlap 678280 678286 678287 ATAGGCGCATATGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTTTATCTCGA TERM 741 678286 - 678306 + T 100 -12.5 -4.02348 | opp_overlap 678287, overlap 678284 678280 678287 AGGCGCATATGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTTTATCTC TERM 742 678287 - 678305 + T 100 -16 -2.99782 | opp_overlap 678287, overlap 678286 678284 678280 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTTATCT TERM 743 678305 - 678287 - T 100 -16 -4.8048 | opp_overlap 678286 678284 678280 678287 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTTATCT YPDSF_0601 678931 - 678335 - | 5-formyltetrahydrofolate cyclo-ligase-family protein TERM 744 678779 - 678767 - G 79 -9.1 -4.17516 | GTCAAAGGAGAGAAA CACGG CTA CCGTG TGAGCTTGCTGGATT YPDSF_0602 679624 - 679295 - | Z-ring-associated protein YPDSF_0603 679961 - 680539 + | hypothetical protein TERM 745 681471 - 681485 + G 75 -9.2 -3.91032 | opp_overlap 681468 681464, overlap 681468 ATGGCAAATTTACCC CCGCTC AGC GGGCGG TTTATGACATCGTTC YPDSF_0604 680627 - 681940 + | proline aminopeptidase P II YPDSF_0605 682026 - 683204 + | 2-octaprenyl-6-methoxyphenyl hydroxylase YPDSF_0606 683254 - 684597 + | hypothetical protein TERM 746 685161 - 685171 + F 75 -8.2 -3.76167 | opp_overlap 685160, overlap 685159 TTGTCGCCTGAAGAG GGCG CCT CGCC TATTTTAGCTTATGG gcvT 685318 - 686415 + | glycine cleavage system aminomethyltransferase T YPDSF_0608 686484 - 686870 + | glycine cleavage system protein H TERM 747 686901 - 686876 - f 71 -9 -3.23979 | overlap 686871 TGAAGAGTAACTCAA GTGAGGGCCA TTTTAT TGGCCCTGAC GCCGAGTAGGTTAAA YPDSF_0609 687082 - 689961 + | glycine dehydrogenase TERM 748 690003 - 689978 - f 82 -8.2 -4.26903 | opp_overlap 689978 689978, overlap 689982 CTCATCTGAGCAAAA CCAAGGGCCG TGAAAG CGGCCCTGAG GTTATTGACAAAGTG TERM 749 689999 - 689982 - f 80 -9.8 -3.71672 | opp_overlap 689978 689978, overlap 689978 TCTGAGCAAAACCAA GGGCCG TGAAAG CGGCCC TGAGGTTATTGACAA TERM 750 690078 - 690104 + F 72 -7.2 -3.9749 | gap 1, opp_overlap 690066, overlap 690073 690077 CATCCATGTAGGCTC GAG-CCGCGCC TTCTCT GGCGCGGACGC TTTACTCTTCTGCCT YPDSF_0610 690339 - 690776 + | hypothetical protein YPDSF_0611 691147 - 691272 + | hypothetical protein TERM 751 691666 - 691679 + F 70 -5.3 -4.47183 | overlap 691662 CAACTAGCCGACATT CCATA ATGT TATGG TTTGTTTAGATAATA YPDSF_0612 691824 - 691988 + | hypothetical protein TERM 752 692331 - 692345 + F 74 -10 -3.1506 | CGATTTCATCTACCT CTACCG ATG CGGTAG TTGGTAGCCAGCTTT TERM 753 692519 - 692502 - f 73 -9.8 -3.04144 | overlap 692482 TTGGCATTGGTAACA CCGCCC TTGTCG GGGCGG CAGCAACGGGGGGAA YPDSF_0614 694065 - 695168 + | hypothetical protein YPDSF_0615 695370 - 696071 + | hemolysin III YPDSF_0616 696329 - 696826 + | hypothetical protein TERM 754 696883 - 696856 - T 100 -18.6 -5.23292 | opp_overlap 696862 696864 TGATATAAAACAAAA TACAGAGACCGG TTAA CCGGTCTCTGTA GAGTAGAACTCTTTA TERM 755 696862 - 696877 + T 75 -10.4 -2.89564 | opp_overlap 696856, overlap 696864 AAAACAAAATACAGA GACCGG TTAA CCGGTC TCTGTAGAGTAGAAC TERM 756 696884 - 696894 + T 73 -5.4 -4.66814 | TAACCGGTCTCTGTA GAGT AGA ACTC TTTATTATTTATCTT YPDSF_0617 697891 - 696899 - | putative global regulator TERM 757 697498 - 697509 + g 74 -7.2 -4.14739 | ATTCAGTAAAGATTT CCGC CAGC GCGG TTTTGGCCTGGCTAC TERM 758 698065 - 698051 - H 80 -2.8 -5.52384 | opp_overlap 698051 698053, overlap 698053 GGGCGATTAAAAAAA TGCACT TGC AGTGTA TTTAGTACCTTAACC TERM 759 698089 - 698108 + H 78 -10 -3.54382 | overlap 698105 CTTAACCCCCTATCC CGGGAGTG GTAA CATTCCCG TTAGTTATATTAACG YPDSF_0618 698208 - 698474 + | hypothetical protein YPDSF_0619 698455 - 698880 + | hypothetical protein YPDSF_0620 698880 - 699578 + | DNA-binding response regulator CreB YPDSF_0621 699603 - 701021 + | sensory histidine kinase CreC TERM 760 701588 - 701607 + G 70 -9.2 -3.55444 | GCTGGCACTGAGTGA TGCGCGGG GTAT CCAGCGCA TTTCGCCACTCAGCG YPDSF_0622 701121 - 702599 + | hypothetical protein TERM 761 702658 - 702620 - T 77 -11.2 -2.8655 | opp_overlap 702630, overlap 702625 702626 CGCAGCTAGACTAGA CTAAACTTAACGGGCA TATCGGG TGCCCGTTAAATTGAG CTCTGATGTAACAGG TERM 762 702653 - 702625 - T 84 -9.7 -3.8766 | opp_overlap 702630, overlap 702620 702626 CTAGACTAGACTAAA CTTAACGGGCA TATCGGG TGCCCGTTAAA TTGAGCTCTGATGTA TERM 763 702652 - 702626 - T 79 -11 -2.92114 | opp_overlap 702630, overlap 702625 702620 TAGACTAGACTAAAC TTAACGGGCA TATCGGG TGCCCGTTAA ATTGAGCTCTGATGT YPDSF_0623 703270 - 702689 - | flavodoxin FldB xerD 703314 - 704213 + | site-specific tyrosine recombinase XerD YPDSF_0625 704244 - 704960 + | thiol:disulfide interchange protein DsbC TERM 764 705222 - 705247 + G 79 -11.1 -3.56643 | overlap 705223 GATGCTGACGGCGCG ACCAGTACCGC GTTG GCGGTGCTGGC TTTGCGCAGTATGGG TERM 765 705223 - 705246 + G 82 -14.6 -2.73771 | overlap 705222 ATGCTGACGGCGCGA CCAGTACCGC GTTG GCGGTGCTGG CTTTGCGCAGTATGG YPDSF_0626 704967 - 706700 + | ssDNA exonuclease RecJ TERM 766 707015 - 706993 - f 100 -13.4 -4.0802 | ACTGGAAGAAGTAAA CGCCGAGCTG GAA CAGCCCGACG TCTGGAATGAACCCG prfB 707045 - 707977 + | peptide chain release factor 2 lysS 707987 - 709504 + | lysyl-tRNA synthetase TERM 767 709533 - 709548 + F 100 -11.8 -4.7497 | ACGATAAATTCCTCA GGGCGC TACG GCGCCC TTTTTACTGAGTCAG YPDSF_0629 709937 - 711151 + | integrase TERM 768 711201 - 711216 + T 100 -9 -5.19879 | opp_overlap 711201 TCCAAACTTTTTAAA GGCATC TCAC GATGCC TTTTTGTATTTAGAG TERM 769 711216 - 711201 - T 75 -9 -3.5936 | opp_overlap 711201 TCCAAACTTTTTAAA GGCATC TCAC GATGCC TTTTTGTATTTAGAG YPDSF_0630 711418 - 711233 - | hypothetical protein YPDSF_0631 711644 - 711519 - | hypothetical protein TERM 770 711753 - 711726 - H 80 -10.5 -3.54424 | TCTCAGGCTGCTAAA CCCAGCAACGG ATTTTG CCGCTGCGGGG GCACTATATCTGACC YPDSF_0632 712339 - 712701 + | DNA binding protein TERM 771 712826 - 712812 - f 70 -7.2 -3.87075 | opp_overlap 712812 712810, overlap 712785 ATGACTTGCTATAAA TAACCT ACT AGGTTA TATTTATTAAGTGGA YPDSF_0633 712865 - 713161 + | hypothetical protein YPDSF_0634 713161 - 713559 + | hypothetical protein TERM 772 713777 - 713808 + T 71 -4.4 -4.7497 | TCTGAATACTCCCCG CTGAACTCTTCAGC AACT GTTCAGGTGTTCAG TTTTTAATACCTGCC TERM 773 713853 - 713887 + T 100 -10.2 -5.26155 | opp_overlap 713853 GAACACCTCTGAATA CTGACTGAACAGTT ATTAGTA AACTATTCAGTCAG TTTTTATCTTTGTAT TERM 774 713887 - 713853 - T 93 -12.4 -3.04248 | opp_overlap 713853 GAACACCTCTGAATA CTGACTGAACAGTT ATTAGTA AACTATTCAGTCAG TTTTTATCTTTGTAT YPDSF_0635 716250 - 713959 - | primase TERM 775 714058 - 714069 + g 80 -2.2 -5.5208 | GTAGCGGAACCCTTT GTCA GTTC TGGC TTTTTTGTATTCTGC TERM 776 715487 - 715500 + g 72 -3.7 -4.82901 | overlap 715488 GTCACCCAACCATTG ACCGC GTTG GCGGC TTTTTCTGCGGACAA TERM 777 716458 - 716496 + H 74 -6.6 -4.2828 | opp_overlap 716462, overlap 716446 716462 TTGCTCCGTGGTGGA TAAACGCCCCGGCAGTAT TGA GTGATGTCGGGGCGTTCC TTTTGATACATCCGC TERM 778 716462 - 716492 + H 93 -11.8 -3.72073 | opp_overlap 716462, overlap 716446 716458 TCCGTGGTGGATAAA CGCCCCGGCAGTAT TGA GTGATGTCGGGGCG TTCCTTTTGATACAT TERM 779 716822 - 716809 - g 79 -5.2 -5.00616 | TTGTGGTGCAAAAAA CGGC TTATAT GCCG TGGAAAGAGAAAGGC YPDSF_0636 716550 - 716876 + | hypothetical protein YPDSF_0637 717235 - 717035 - | regulatory protein TERM 780 717100 - 717151 + g 74 -6.6 -4.40993 | gap 1, opp_overlap 717105 TCACCTCACTTTCAA CAAAAGCGATAGCCCGCCCCC CTATTTTTATC GGTGGCGGGA-AGCGCTTTTG TTTTAATAATTTATA TERM 781 717336 - 717323 - R 75 -3.1 -5.18866 | opp_overlap 717323, overlap 717318 GGCAAATAAATAAAA GGAAC CTTT ATTCC TGTCGTTTTAGGTCA YPDSF_0638 717749 - 717417 - | hypothetical protein YPDSF_0639 717991 - 717755 - | hypothetical protein YPDSF_0640 718369 - 718004 - | hypothetical protein YPDSF_0641 718638 - 719780 + | hypothetical protein YPDSF_0642 720287 - 721825 + | hypothetical protein TERM 782 721981 - 721964 - g 73 -2.7 -4.93877 | gap 1, overlap 721967 GTGGAGCAAATAAAA TGAGCCTC AAC GAAGC-CA AAGAAGCCTACAAGC YPDSF_0643 721822 - 722016 + | hypothetical protein TERM 783 724011 - 724027 + GF 72 -7.9 -3.76835 | AGTTCTCAAGCATGG GTCGCAG AAA CAGCGAC TTATATGTTGTTCCG TERM 784 724864 - 724854 - gf 76 -3.2 -5.11836 | ATACTCAAAACAAAA GCTC AAA AAGC ACTTTTACAACAGCA YPDSF_0644 723297 - 725492 + | hypothetical protein TERM 785 725711 - 725700 - gf 71 -5.8 -4.36914 | overlap 725702 CCTGGTTTCAGAAAA TGGG GCTA CCCA GCTCTAGGCTGACAC YPDSF_0645 725462 - 726229 + | hypothetical protein YPDSF_0646 726834 - 727613 + | hypothetical protein YPDSF_0647 727830 - 728135 + | hypothetical protein YPDSF_0648 728554 - 728234 - | hypothetical protein YPDSF_0649 729234 - 728554 - | hypothetical protein TERM 786 728643 - 728667 + g 73 -9.4 -3.80733 | gap 1 TGTCTACCGCAGCCA GTAGCGCCGTA TTAA TACG-CGCTAC TTGTTCTGGCGTGAG TERM 787 729336 - 729318 - R 75 -7.4 -4.27861 | opp_overlap 729318 729329, overlap 729319 AAGATATATCTAAAA CGCGTTAC TGC GCAACGCA TCCCGCGTGCTTTTA TERM 788 729461 - 729448 - R 77 -3.9 -5.21709 | overlap 729459 GGGGATATCAAAAAA TGATT TTTA AATCA AAATGTTGAACTGGG TERM 789 729651 - 729639 - R 74 -4.8 -4.82901 | opp_overlap 729609 CCCTTCTGATAAAAA GGTG AGCAG CACC AAACGGTTATTGGCT YPDSF_0650 730515 - 729658 - | hypothetical protein YPDSF_0651 731409 - 730891 - | hypothetical protein TERM 790 732167 - 732140 - R 100 -12.7 -3.57792 | opp_overlap 732157 GGATTTACCCTCAAA CCCGACAGCAG ATTTTG CCGCTGCCGGG GGCGATAGCGATCAT YPDSF_0652 733189 - 732188 - | sugar-binding periplasmic protein TERM 791 733151 - 733179 + g 80 -2.3 -5.52384 | overlap 733154 AAAGGAAAGTATCAG CGTTGCAGCAAGC AGA GTTTGTAGCATTG TTTTTTTCATAAAAG TERM 792 733154 - 733176 + g 74 -4.8 -4.8487 | overlap 733151 GGAAAGTATCAGCGT TGCAGCAAGC AGA GTTTGTAGCA TTGTTTTTTTCATAA YPDSF_0653 734628 - 733624 - | sugar transport system permease YPDSF_0654 736208 - 734700 - | sugar transport ATP-binding protein TERM 793 736672 - 736694 + r 73 -9.1 -3.46509 | overlap 736666 CTATCTTAATATTCA GCGGGCTTC AACAG GAAACCCGC TTGGTATTCTTAACC YPDSF_0655 737847 - 736747 - | sugar transport ATP-binding protein TERM 794 737884 - 737904 + H 84 -3.9 -5.50313 | opp_overlap 737890, overlap 737891 CAGTCAGGGGGCCAT CACACATCA CCC TGAGGTGCG TTTTTTGATTTTATG YPDSF_0656 738204 - 739439 + | sugar-binding protein YPDSF_0657 739599 - 739739 + | ABC maltodextrin transporter, permease subunit TERM 795 740502 - 740512 + GF 74 -4.6 -4.87389 | TGATGCAGACGTGGC TGGG TTT CCCG TTTGTTTTTGCCATG YPDSF_0658 739712 - 740908 + | maltodextrin transport permease YPDSF_0659 740920 - 741771 + | maltodextrin permease protein YPDSF_0660 741776 - 742978 + | galactosidase TERM 796 743000 - 742980 - T 83 -11.9 -2.60571 | opp_overlap 742975, overlap 742979 AAGTTTTTAATTAAT CGTTGCCCA TTA TGGGCAACA CCAAGTATTTATTAT TERM 797 744248 - 744261 + T 75 -5.3 -4.8622 | AAGTAAAGTAGACGC TGATG TTGC CATCA TTTTTGATTGGGAAA TERM 798 744641 - 744610 - T 73 -7.4 -4.15044 | gap 1, overlap 744638 744639 TCTGGTCCGAAGAAA TTGACTG-TCTGGCC GAT GGCGAGAGCAATCAA GTCCAAGGACTTGCA TERM 799 744919 - 744953 + T 74 -7.8 -3.99324 | overlap 744923 AGTTCCCTTATGGGG TTACCGCTCACCGTCG TAC CGATGGTGAGAGTGAA TTTATCGTGGTAGAA TERM 800 744923 - 744949 + T 91 -13 -2.7242 | overlap 744919 CCCTTATGGGGTTAC CGCTCACCGTCG TAC CGATGGTGAGAG TGAATTTATCGTGGT TERM 801 745143 - 745122 - T 73 -10.1 -2.9186 | opp_overlap 745122 ACTGAATGCCATACA CGCCCATTC AGCC GAGTGGGCG TTTTTTTACATCGAC TERM 802 745122 - 745143 + T 100 -12.3 -5.47218 | opp_overlap 745122 ACTGAATGCCATACA CGCCCATTC AGCC GAGTGGGCG TTTTTTTACATCGAC TERM 803 745717 - 745692 - T 100 -16.3 -4.73108 | GGTATAAAACTAAAA TGCTCACTACC TAAG GGTAGTGAGCA TAGAAGAATAACCGA YPDSF_0664 747155 - 745896 - | maltoporin lacI 747427 - 748500 + | lac repressor TERM 804 748600 - 748579 - T 100 -15.9 -4.96501 | overlap 748596 CCGTACAAAAATAAA CGGGCTTCC ATCA GGAAGCCCG TCAGACTGCTGACAA TERM 805 748690 - 748664 - T 86 -10.1 -3.98282 | gap 1, overlap 748665 748678 748680 748681 GGCAGAGGAAGTAAA GCGTCCGCGCCA AAGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 806 748691 - 748665 - T 73 -10.1 -2.98487 | gap 1, overlap 748664 748678 748680 748681 GCAGAGGAAGTAAAG CG-TCCGCGCCA AAGA TGGCGCGGCTCG AGCCTACATGGATGT TERM 807 748767 - 748792 + T 84 -9.7 -3.84017 | opp_overlap 748764, overlap 748769 CTTTGTCAATAACCT CACGGGCTTCC ATCA GGAAGTCCGTC TTGTATTTAACATTA TERM 808 748769 - 748790 + T 100 -12.3 -3.49634 | opp_overlap 748764, overlap 748767 TTGTCAATAACCTCA CGGGCTTCC ATCA GGAAGTCCG TCTTGTATTTAACAT YPDSF_0666 751188 - 748813 - | glucosidase YPDSF_0667 752646 - 751339 - | sugar transporter TERM 809 752199 - 752217 + g 70 -2.3 -5.00616 | overlap 752192 752202 CCACCCCTGCCCATC CAGCGGC AATGG GCCGTTC TTTTTTCGGGAACCA TERM 810 752202 - 752214 + g 76 -6.2 -4.61482 | overlap 752192 752199 CCCCTGCCCATCCAG CGGC AATGG GCCG TTCTTTTTTCGGGAA TERM 811 752783 - 752801 + H 82 -3.2 -5.56264 | opp_overlap 752783 GCGATATAAAATATA CTCAAT TGATAAT ATTGAG TTTTTTATATTTCAA TERM 812 753096 - 753070 - g 75 -8.8 -3.8691 | overlap 753068 AAAATACAAGAAATA GCTAATCAAACG GGT CTTTCGATTAGC ACGGTATCAAGAGTG YPDSF_0668 753040 - 754122 + | LacI-family regulatory protein TERM 813 754237 - 754211 - T 95 -13.1 -3.05844 | opp_overlap 754217, overlap 754213 754217 TTGGGGAGTCGAAGA GACGAACCGCA GACCA TGCGGTTCATC AACGGTACTGGCTAT TERM 814 754235 - 754213 - T 74 -9.9 -3.08813 | opp_overlap 754217, overlap 754211 754217 GGGGAGTCGAAGAGA CGAACCGCA GACCA TGCGGTTCA TCAACGGTACTGGCT YPDSF_0669 754941 - 754363 - | ThiJ/PfpI-family thiamine biogenesis protein TERM 815 754767 - 754796 + g 74 -9.9 -3.57792 | opp_overlap 754776 GGTGATCCAGACGAT CGCTTAACAGCGC ATCT GCGCTGATCGGCG TTTCAAAATAGGTGC gatY 755819 - 754965 - | tagatose-bisphosphate aldolase YPDSF_0671 757417 - 755930 - | hypothetical protein YPDSF_0672 759147 - 757540 - | sulfatase TERM 816 757584 - 757602 + g 91 -11 -4.36903 | GATAGCGATCTTGCC CCCAAGCC ACG GGTTTGGG TTTATCTTTGATCCA TERM 817 758602 - 758618 + g 71 -6.5 -4.15565 | GACGGAGATCATGTT GTCGTGA TAA TCGCGGC TTTTGACCTCATCGG TERM 818 758956 - 758970 + g 84 -4.2 -5.25803 | overlap 758941 758937 758952 GCGTACGGGAACTGG GCGCTG GCT TAGTGC TTTTTTATCCAGATT YPDSF_0673 760394 - 759168 - | regulatory protein TERM 819 760565 - 760546 - R 100 -12.2 -5.24531 | ATCGCCTATAAAAAA CGCACATC AGGT GATGTGCG CCAGTGCAACAAAAT YPDSF_0674 761696 - 760638 - | hypothetical protein TERM 820 760887 - 760872 - G 79 -6.8 -4.63932 | opp_overlap 760876 CAGCCCGTAACAAAA CAGCGC TGTT GCACTG CTCTCTGGGGCAGGA YPDSF_0675 762467 - 761712 - | 2-deoxy-D-gluconate 3-dehydrogenase YPDSF_0676 763829 - 762663 - | acetylglucosamine-6-phosphate deacetylase TERM 821 763451 - 763441 - G 74 -6.8 -4.36914 | GGCCCCTCCAGAAAA CTGC CGA GCAG GGTTGCGGTGCGGGT YPDSF_0677 764272 - 763832 - | PTS permease protein YPDSF_0678 765248 - 764358 - | PTS permease protein TERM 822 765003 - 765022 + g 76 -6.4 -4.63218 | opp_overlap 765002, overlap 765005 CGATTTCGCCAAATC TGCACGGT TGTT ACCGTGGA TTTTCTTCAACGCGG YPDSF_0679 766026 - 765238 - | PTS permease protein YPDSF_0680 766570 - 766073 - | PTS transport protein YPDSF_0681 767754 - 766588 - | phosphosugar isomerase TERM 823 767595 - 767577 - G 71 -5.8 -4.41633 | overlap 767574 767578 CACCGGTAAAAATAA TCCGCGTG TTA CTCGCGGC TAATGCCTGATGCAG YPDSF_0682 769049 - 767751 - | tagatose 6-phosphate kinase TERM 824 768739 - 768765 + g 80 -10.2 -3.79747 | overlap 768740 GCATGCGCCATGGCT TCGTTGGCAG GCAAGTG CTGCCAACGG TTTGGTCCTAAATGG TERM 825 768740 - 768764 + g 73 -11.5 -2.87527 | overlap 768739 CATGCGCCATGGCTT CGTTGGCAG GCAAGTG CTGCCAACG GTTTGGTCCTAAATG YPDSF_0683 769875 - 769099 - | DeoR family regulatory protein YPDSF_0684 770715 - 772268 + | sulfatase TERM 826 772290 - 772319 + T 100 -14.5 -3.44206 | gap 1 ATCGACGGCTGACTT CCTCTTCCTGA-CA ATC TGCTCAGGAAGAGG TTATCGTGGATCTTG TERM 827 772454 - 772439 - T 100 -11.8 -4.91084 | GACCTAATAATAAAA GGGCGC CTAA GCGCCC GCAGACTGCTGACAA TERM 828 772543 - 772517 - T 84 -10.1 -3.82218 | gap 1, opp_overlap 772526, overlap 772518 772533 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 829 772544 - 772518 - T 72 -10.1 -2.88849 | gap 1, opp_overlap 772526, overlap 772517 772533 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT TERM 830 772642 - 772618 - T 88 -9.9 -4.1552 | opp_overlap 772621, overlap 772620 772621 CACTTTGTCAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCATATGCGCCTAT TERM 831 772640 - 772620 - T 100 -12.5 -3.6761 | opp_overlap 772621, overlap 772618 772621 CTTTGTCAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 832 772639 - 772621 - T 100 -16 -2.80244 | opp_overlap 772621, overlap 772620 772618 TTTGTCAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 833 772621 - 772639 + T 100 -16 -4.8048 | opp_overlap 772621 772620 772618 TTTGTCAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC YPDSF_0685 773154 - 772720 - | transposase TERM 834 773189 - 773207 + H 100 -13.2 -4.01078 | CCAGGGGGTAATCTG CTCTCCTG ATT CAGGAGAG TTTATGGTCACTTTT YPDSF_0686 773211 - 774233 + | transposase for insertion sequence IS100 TERM 835 774314 - 774300 - g 77 -11.4 -3.3506 | overlap 774291 TGGAAAGCCTTATAA GCGCAG CGC CTGCGC TGTCACAACAGGCAG YPDSF_0687 774233 - 775012 + | transposase/IS protein TERM 836 775250 - 775268 + T 100 -16 -4.37092 | opp_overlap 775250 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAT TERM 837 775268 - 775250 - T 100 -16 -3.07307 | opp_overlap 775250 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAT TERM 838 775281 - 775315 + T 79 -7.9 -4.33274 | gap 1, opp_overlap 775286 775287, overlap 775283 775287 GGGTTTTCTGGGCAC AATAACCTCAGGGCGC CTAA GCGCCCTGA-GTCATG TTTTAATCATGTAAC TERM 839 775283 - 775313 + T 86 -10.5 -3.76811 | gap 1, opp_overlap 775286 775287, overlap 775281 775287 GTTTTCTGGGCACAA TAACCTCAGGGCGC CTAA GCGCCCTGA-GTCA TGTTTTAATCATGTA TERM 840 775311 - 775286 - T 100 -14.7 -3.78934 | opp_overlap 775283 775281 775287, overlap 775287 TTCTGGGCACAATAA CCTCAGGGCGC CTAA GCGCCCTGAGT CATGTTTTAATCATG TERM 841 775310 - 775287 - T 100 -18.2 -2.87146 | opp_overlap 775283 775281 775287, overlap 775286 TCTGGGCACAATAAC CTCAGGGCGC CTAA GCGCCCTGAG TCATGTTTTAATCAT TERM 842 775287 - 775310 + T 100 -18.2 -2.96723 | opp_overlap 775287 775286, overlap 775283 775281 TCTGGGCACAATAAC CTCAGGGCGC CTAA GCGCCCTGAG TCATGTTTTAATCAT YPDSF_0688 778470 - 775357 - | hypothetical protein TERM 843 776235 - 776215 - G 75 -9.1 -3.87149 | opp_overlap 776214 776215 CGCATCAAATTTAAA GGCAAACAT GCC ATATTTGCC ACTTAGTGATGAGTG YPDSF_0689 780672 - 778540 - | hypothetical protein YPDSF_0690 781790 - 780840 - | hypothetical protein YPDSF_0691 782701 - 782393 - | hypothetical protein TERM 844 783043 - 783021 - H 88 -9.8 -4.12188 | overlap 783022 GTACTACCTTTAAAA CGCCGTGCAT TAA ATGCCCGGCA TACAATAGGGTTATA TERM 845 783042 - 783022 - H 79 -11.1 -3.06991 | overlap 783021 TACTACCTTTAAAAC GCCGTGCAT TAA ATGCCCGGC ATACAATAGGGTTAT YPDSF_0692 783077 - 783832 + | putative carbonic anhydrase TERM 846 785092 - 785082 - g 86 -5.4 -5.30189 | overlap 785074 GATAAGACTAAAAAA TCCT TTT AGGA CACTCAACTGTAATC YPDSF_0693 785029 - 785562 + | general secretion pathway protein C TERM 847 785670 - 785685 + G 89 -2.6 -5.8187 | gap 1, opp_overlap 785670, overlap 785672 GGCAAAGGAATTAAA TCTATCC ATG GGAT-GA TTTTTTTATTCACTC TERM 848 785814 - 785803 - g 70 -3 -4.79657 | overlap 785795 AGAATATTAATAAAA CTAT TATC ATAG ATCCTACGGTCCAAG YPDSF_0694 785643 - 787565 + | general secretion pathway protein D TERM 849 788001 - 787991 - g 82 -4 -5.24129 | opp_overlap 787991 TCTTTCGATAAAAAA CTTA CTG TAAG ATTTCGTATTGATGG YPDSF_0695 787712 - 789073 + | general secretion pathway protein E YPDSF_0696 789245 - 790261 + | general protein secretion protein TERM 850 790484 - 790501 + GF 84 -9.9 -3.76224 | GGATTATCCGACCGA GCAGCAA GGCA TTGCTGC TTTAGTAACTAAACC YPDSF_0697 790281 - 790718 + | general secretion pathway protein G TERM 851 791155 - 791185 + GF 71 -7 -4.09685 | gap 1, overlap 791151 CAATTGGTTTTCTCT CCAGAGGAGGAGT ATTCGG ACTTCTCCT-TGG TTTTAAGAAATGAAG YPDSF_0698 790675 - 791265 + | general secretion pathway protein H YPDSF_0699 791348 - 791647 + | general secretion pathway protein I YPDSF_0700 792245 - 793201 + | general secretion pathway protein K YPDSF_0701 793185 - 794375 + | general secretion pathway protein L YPDSF_0702 794372 - 794833 + | hypothetical protein YPDSF_0703 794859 - 795701 + | prepilin peptidase YPDSF_0704 796050 - 795685 - | lipoprotein TERM 852 797986 - 798007 + G 77 -10.1 -3.74693 | TTTATTATCGAGTTC GGTGACCGC CTGA GCGATCACC TTTAATACGGTGGCA YPDSF_0705 796804 - 798012 + | transposase for the IS285 insertion element TERM 853 798070 - 798099 + T 93 -10.7 -4.16842 | gap 1, opp_overlap 798069 798066, overlap 798071 TCTCTAAAATATATT CGGCGGCT-GAGTC ACT GACTCTGGCCGCCC TTTATTACCGCTGAC TERM 854 798071 - 798098 + T 100 -14.2 -3.09784 | gap 1, opp_overlap 798069 798066, overlap 798070 CTCTAAAATATATTC GGCGGCT-GAGTC ACT GACTCTGGCCGCC CTTTATTACCGCTGA TERM 855 798140 - 798153 + T 71 -2.3 -5.14563 | overlap 798141 798148 798149 TCCTTTCCACTCCGT ATCGC TATA GCGAC TTTTTTACTAAAAAG YPDSF_0706 798912 - 798247 - | 2-deoxyglucose-6-phosphatase TERM 856 799259 - 799245 - H 76 -10 -3.36195 | overlap 799243 799241 799256 TAAATAGCAAACATA GCGGTA AAG TACCGC ACAACGTGTGGATGT YPDSF_0707 799323 - 799877 + | yfeABCD locus regulator YPDSF_0708 800881 - 800006 - | hypothetical protein YPDSF_0709 801118 - 800906 - | membrane protein YPDSF_0710 802079 - 801186 - | chelated iron transport system membrane protein TERM 857 801915 - 801898 - G 73 -5.5 -4.67755 | ATACCGAGCCAAAAA GCCAGAA CAAT CCCTGGC AGCACAGCATGAGAA YPDSF_0711 802960 - 802076 - | chelated iron transport system membrane protein YPDSF_0712 803850 - 802960 - | ATP-binding transport protein YPDSF_0713 804815 - 803847 - | periplasmic-binding protein TERM 858 805044 - 805057 + G 82 -6.7 -4.89477 | GAATTCAAAAGTCGG TTGCC TAAT GGCAA TTTTATTGTTGGCGG TERM 859 805138 - 805127 - g 85 -3.6 -5.40072 | GGTGGCTGAAAAAAA CGCC ACAG GGCA ATTCTCTTAACGTAG YPDSF_0714 805027 - 805689 + | membrane-bound lytic murein transglycosylase YPDSF_0715 806494 - 805811 - | multiple drug resistance protein MarC TERM 860 807184 - 807157 - R 100 -13.5 -5.19275 | AGCCAGAAAATAAAA CGCCCCGATTG AATAAA CAATCAGGGCG ACGTTCCAGTAACCA YPDSF_0716 808035 - 807823 - | hypothetical protein TERM 861 807893 - 807875 - G 86 -3 -5.56568 | overlap 807877 ACACCATCAAAAAAA CGGCCTTT CGA AACGGCAG ACATAAAGTTTTGAT TERM 862 810121 - 810109 - g 80 -3.3 -5.32565 | CAAGTAACCAAAAAA CTGCA AGA TGCGG GTATTAGAGCAAAAG YPDSF_0717 808426 - 810354 + | threonyl-tRNA synthetase YPDSF_0718 810559 - 810909 + | translation initiation factor IF-3 rpmI 811006 - 811203 + | 50S ribosomal protein L35 rplT 811241 - 811597 + | 50S ribosomal protein L20 TERM 863 811610 - 811628 + F 100 -10.3 -4.49756 | opp_overlap 811605 811610 TAAGTCAGAATTGAA GAGGGAG CTTGT CTCCCTC TTTTAATCTTTGCAC TERM 864 811628 - 811610 - f 78 -10.3 -3.2496 | opp_overlap 811610, overlap 811605 TAAGTCAGAATTGAA GAGGGAG CTTGT CTCCCTC TTTTAATCTTTGCAC TERM 865 811787 - 811804 + F 100 -8.4 -6.04324 | AAAAATAGCGCCGAA GCCTCC CATCGT GGAGGC TTTTTTGTTTTTTAC TERM 866 812212 - 812201 - g 78 -3.6 -5.09895 | overlap 812202 TATCTAGGTAAAAAA GGCC ACTT GACC CTTCAAATGACATCG TERM 867 812954 - 812970 + G 79 -8 -4.29176 | AATGTCGGTATCGAT CCTGAG ATTTA CTCAGG TTTTGCATTCGGTAT pheS 812096 - 813079 + | phenylalanyl-tRNA synthetase subunit alpha pheT 813093 - 815480 + | phenylalanyl-tRNA synthetase subunit beta ihfA 815485 - 815781 + | integration host factor subunit alpha TERM 868 815800 - 815815 + F 100 -11.8 -5.45802 | opp_overlap 815800 GTTTCCGACATAAAA GGCCGC GCAA GCGGCC TTTTTCTTTTCAAGA TERM 869 815815 - 815800 - f 100 -11.8 -4.52589 | opp_overlap 815800 GTTTCCGACATAAAA GGCCGC GCAA GCGGCC TTTTTCTTTTCAAGA YPDSF_0724 816154 - 816573 + | hypothetical protein TERM 870 816590 - 816634 + F 75 -8.7 -3.63515 | opp_overlap 816590 816588 CGAGCATAACAAACA GTTGCTAACTTTACTTGTTTG CTA TGACCAAGCAGAGTTAGCGAC TTATTAGCAATAAAG YPDSF_0725 816785 - 817807 + | vtamin B12-transporter permease YPDSF_0726 817877 - 818431 + | putative glutathione peroxidase YPDSF_0727 818456 - 819214 + | vitamin B12-transporter ATPase YPDSF_0728 819564 - 820718 + | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase TERM 871 820947 - 820965 + G 82 -11 -3.76492 | opp_overlap 820947 TAATTATGGTCAACA TTCCGCCA TTA TGGCGGGA TTTAATCAGGTTAGC YPDSF_0729 820705 - 821688 + | undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase TERM 872 821794 - 821804 + G 91 -6.8 -5.10767 | overlap 821796 ATACTGATAATCCTG GCGA GAA TCGC TTTTTCTCTTCGGTC YPDSF_0730 821685 - 823688 + | bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase TERM 873 823821 - 823838 + G 79 -6.9 -4.7254 | opp_overlap 823819, overlap 823823 GGCCGGATAATATGG GACGCCA TTTA TGGCGCC TTTTTCGTCCGCGCT YPDSF_0731 823685 - 824590 + | hypothetical protein TERM 874 824786 - 824776 - g 86 -8.2 -4.59773 | opp_overlap 824776 824775 824773 CGTTATTTTGAAAAA CCGG TCG CCGG GTATTGGTTTAATAA arnT 824587 - 826251 + | 4-amino-4-deoxy-L-arabinose transferase TERM 875 826321 - 826369 + G 82 -13.1 -3.34895 | opp_overlap 826338 GTCAAAAACAGGCTG CGCAGTGTTGGGAGCAACCGCAG GCC CGGCGGTTGAATCTGACATTGCG TTGGTTGGCGATAGC TERM 876 826442 - 826469 + G 87 -9.9 -4.32571 | ATTGCAGCAACTCCC GCTGAGCGTGG CCTATC CTATGCTCAGC TTTAATTTTGTGTTG YPDSF_0733 826248 - 826592 + | hypothetical protein YPDSF_0734 826589 - 826975 + | hypothetical protein YPDSF_0735 827255 - 827719 + | lipoprotein lplA 827844 - 828860 + | lipoate-protein ligase A YPDSF_0737 828912 - 830375 + | hypothetical protein TERM 877 830494 - 830446 - T 95 -7.8 -5.00616 | gap 1, opp_overlap 830460, overlap 830425 830448 TTTTTTCGGAAAAAA TAGGGATAGA-AAAAGTTAAC CCGACAAC GTTAACTTTTCCCTATCCCGA AGGTATTCATTTAAT TERM 878 830492 - 830448 - T 91 -10.4 -4.13561 | gap 1, opp_overlap 830460, overlap 830425 830446 TTTTCGGAAAAAATA GGGATAGA-AAAAGTTAAC CCGACAAC GTTAACTTTTCCCTATCCC GAAGGTATTCATTTA YPDSF_0738 831590 - 830544 - | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 879 831475 - 831489 + g 74 -10 -3.50393 | TTCTCTATTCGTTTA CGTGAC GCC GTCACG TTATCTGCAATAACC YPDSF_0739 832568 - 831747 - | hypothetical protein YPDSF_0740 832867 - 835251 + | phosphoenolpyruvate synthase TERM 880 835334 - 835353 + T 100 -10 -5.47399 | overlap 835347 TATAGGTATTCATCA TCCGCAGC TTAG GTTGCGGA TTTTTTTGCAATTAA TERM 881 835507 - 835488 - T 100 -9.3 -6.21477 | AATAGCAAAAAAAAA GCCTGTC TTAGGT GACAGGC AAAGACTACACACAG TERM 882 835677 - 835667 - T 86 -2.6 -5.7946 | CTCTGAATAAAAAAA TTAT TAA ATAA GAAGTAGAATGAGAT YPDSF_0741 836891 - 835851 - | putative inner membrane protein TERM 883 837609 - 837624 + G 74 -4 -5.03747 | overlap 837611 AGGCACCGGGTGTCA TTCAGT CGGT ACTGGA TTTTTTGGACGCTTT TERM 884 837659 - 837649 - g 74 -6.8 -4.4078 | opp_overlap 837634 CGCTTTGAAGCAAAA CGGT TTT ACCG GCGATACTGCTACTA YPDSF_0742 837575 - 840631 + | hypothetical protein YPDSF_0743 840753 - 841169 + | hypothetical protein TERM 885 841159 - 841177 + F 78 -5.3 -5.03314 | gap 1 TAACGATCGCCGTAT TGACG-CG CTAA CGTCGTCA TTTTTTGCCAATAGC TERM 886 841930 - 841942 + G 74 -6.9 -4.28977 | opp_overlap 841929 TCGGCGTCAAACAGT CCGGT TGT GCCGG TTTTGCCTATGTTAT sufA 841785 - 842156 + | iron-sulfur cluster assembly scaffold protein TERM 887 842965 - 842951 - g 74 -11.4 -3.1355 | GTCAGCTATATCGAA GGGTGC TCG GCACCC GTGCGCGACAGCTAT TERM 888 843526 - 843513 - g 79 -5.3 -4.90906 | opp_overlap 843513, overlap 843504 CCACAACATCAAAAA TTGGT GATG ACCAA CTGTTCTATTGCTTG YPDSF_0745 842171 - 843682 + | cysteine desulfurase activator complex subunit SufB sufC 843868 - 844614 + | cysteine desulfurase ATPase component YPDSF_0747 844589 - 845914 + | cysteine desulfurase activator complex subunit SufD TERM 889 846132 - 846143 + G 70 -4.4 -4.63218 | GGAAGCCGTACGCAC TCAG GTGG CTGA TTTTATTCACGCCGC YPDSF_0748 845911 - 847131 + | selenocysteine lyase TERM 890 847164 - 847188 + F 91 -6.4 -5.43553 | opp_overlap 847164 ACAGGCAACACCAAA GCCGACTATT CTTTC AGCAGTCGGC TTTTATTTTTTACGT YPDSF_0749 847220 - 847642 + | cysteine desufuration protein SufE YPDSF_0750 847913 - 848932 + | hypothetical protein YPDSF_0751 849755 - 848976 - | transposase/IS protein TERM 891 849674 - 849688 + g 77 -11.4 -3.3506 | overlap 849687 CTGCCTGTTGTGACA GCGCAG GCG CTGCGC TTATAAGGCTTTCCA YPDSF_0752 850777 - 849755 - | transposase TERM 892 850799 - 850781 - R 100 -13.2 -4.01078 | AAAAGTGACCATAAA CTCTCCTG AAT CAGGAGAG CAGATTACCCCCTGG TERM 893 850943 - 850987 + r 90 -11.6 -3.66556 | gap 1, opp_overlap 850981 850985, overlap 850944 AATAACTAATCACTT GTCTGTGCTTTACCGTGGTGG AGAT CCATCGTGGTAAAGC-CAGAA TTGTATTCCGCGCTT TERM 894 850944 - 850986 + r 100 -15.1 -2.79452 | gap 1, opp_overlap 850981 850985, overlap 850943 ATAACTAATCACTTG TCTGTGCTTTACCGTGGTGG AGAT CCATCGTGGTAAAGC-CAGA ATTGTATTCCGCGCT TERM 895 851281 - 851257 - R 100 -9.9 -4.44046 | opp_overlap 851260, overlap 851259 851260 CGTAGGGCAAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCATATGCGCCTAT TERM 896 851279 - 851259 - R 100 -12.5 -3.82628 | opp_overlap 851260, overlap 851257 851260 TAGGGCAAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 897 851260 - 851278 + r 100 -16 -4.8048 | opp_overlap 851259 851257 851260 AGGGCAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 898 851278 - 851260 - R 100 -16 -2.88854 | opp_overlap 851260, overlap 851259 851257 AGGGCAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC YPDSF_0753 851817 - 851359 - | transposase for the IS1541 insertion element TERM 899 851948 - 851930 - R 100 -16 -3.07307 | opp_overlap 851930 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 900 851930 - 851948 + r 100 -16 -4.36914 | opp_overlap 851930 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 901 851968 - 851986 + r 100 -14.6 -4.8622 | opp_overlap 851968 CTGGGCACAAAAAAA TGGCGCAC AAT GTGCGCCA TTTTTCATTCAGGAA TERM 902 851986 - 851968 - R 100 -14.6 -5.60993 | opp_overlap 851968 CTGGGCACAAAAAAA TGGCGCAC AAT GTGCGCCA TTTTTCATTCAGGAA TERM 903 852510 - 852539 + r 77 -10.8 -2.77344 | opp_overlap 852510 852515, overlap 852515 GCAAGCTTTAAAAAA GAAAACGCCGCT ATAGAG AGCGGCGTTTTA ATTATTGAACAATAA TERM 904 852539 - 852510 - R 100 -10.8 -5.055 | opp_overlap 852510 852515, overlap 852515 GCAAGCTTTAAAAAA GAAAACGCCGCT ATAGAG AGCGGCGTTTTA ATTATTGAACAATAA TERM 905 852534 - 852515 - R 100 -10.7 -5.42198 | opp_overlap 852515 852510, overlap 852510 CTTTAAAAAAGAAAA CGCCGCT ATAGAG AGCGGCG TTTTAATTATTGAAC TERM 906 852515 - 852534 + r 100 -10.7 -4.56133 | opp_overlap 852510 852515, overlap 852510 CTTTAAAAAAGAAAA CGCCGCT ATAGAG AGCGGCG TTTTAATTATTGAAC YPDSF_0754 853977 - 852565 - | pyruvate kinase TERM 907 852863 - 852873 + g 70 -3.2 -4.89393 | GCGACCACAATCACT TTGG CTT CCAG TTTTTCTGCGGTTTC TERM 908 854919 - 854929 + r 82 -6.8 -4.87803 | overlap 854918 ATCCAGATGTTGTTG GGGA GAC TCCC TTTTATTTGAGACTA YPDSF_0755 856381 - 855008 - | multidrug efflux protein YPDSF_0756 856630 - 857286 + | riboflavin synthase subunit alpha TERM 909 857327 - 857298 - T 86 -5.7 -5.3236 | opp_overlap 857298 857301 857303 857305, overlap 857301 ATAACCTACAAAAAA TAAGACAGGGG TTTTTATC CCCCTGTCTCC TATCTGAGGTTAGCG TERM 910 857324 - 857301 - T 100 -9.6 -4.73105 | opp_overlap 857298 857301 857303 857305, overlap 857298 ACCTACAAAAAATAA GACAGGGG TTTTTATC CCCCTGTC TCCTATCTGAGGTTA YPDSF_0757 858488 - 857337 - | cyclopropane fatty acyl phospholipid synthase YPDSF_0758 860170 - 858968 - | inner membrane transport protein YdhC TERM 911 860156 - 860172 + g 70 -3 -4.77047 | ATAGAACATGAAACT GGATGA CGTTT TCATTC TTTATTTCTCTTTTA TERM 912 860909 - 860929 + G 74 -4.5 -4.82128 | overlap 860910 CATAGGGGCGACCCG TGCCATCCC AGT GGGTGGGCG TTTTGTCTTTCGTGA YPDSF_0759 860460 - 861392 + | putative DNA-binding transcriptional regulator TERM 913 861434 - 861414 - T 84 -9.8 -3.85092 | opp_overlap 861417, overlap 861417 861427 ACCATCGATAGCAAA TAACCGCA GGGAA TGCGGTTA TCCGAATCGGGCCGG TERM 914 861431 - 861417 - T 72 -7.1 -4.05208 | opp_overlap 861417, overlap 861414 861427 ATCGATAGCAAATAA CCGCA GGGAA TGCGG TTATCCGAATCGGGC YPDSF_0760 862506 - 861481 - | DNA-binding transcriptional repressor PurR TERM 915 861778 - 861795 + g 86 -6.9 -4.9725 | opp_overlap 861764 861778, overlap 861781 ATCGCCGCCACAGAA CACCGCC GTTG GGCGATG TTTTTGTGTCAGAAT TERM 916 862958 - 862980 + r 100 -16.4 -4.28188 | opp_overlap 862958 862961 GGTGAATGGTAATAA TAAGGGCGGT TAA ACCGCCCTTA TTTATGTTATCGATG TERM 917 862980 - 862958 - R 100 -16.4 -3.68222 | opp_overlap 862958, overlap 862961 GGTGAATGGTAATAA TAAGGGCGGT TAA ACCGCCCTTA TTTATGTTATCGATG TERM 918 862977 - 862961 - R 100 -13.7 -3.97139 | opp_overlap 862958, overlap 862958 GAATGGTAATAATAA GGGCGGT TAA ACCGCCC TTATTTATGTTATCG YPDSF_0761 863611 - 863033 - | superoxide dismutase TERM 919 863436 - 863424 - G 73 -10.5 -3.31162 | opp_overlap 863424, overlap 863422 863420 GCATTATTAAACACA CCGCC ATT GGCGG TTTTCACGATCTCTT TERM 920 863424 - 863436 + g 88 -10.5 -4.1413 | opp_overlap 863424 863422 863420 GCATTATTAAACACA CCGCC ATT GGCGG TTTTCACGATCTCTT YPDSF_0762 864840 - 863989 - | hypothetical protein TERM 921 864549 - 864565 + g 70 -2.9 -4.87892 | overlap 864549 CTGCAGTTTTACTTT CAGTTGT CCG ACTGCTG TTTATTTTATTGCGA TERM 922 864954 - 864976 + H 88 -7 -5.1287 | opp_overlap 864954 864960, overlap 864957 GATATTGTGAGAAAA CATTAATGGC GTT GCCATTGTTG TTTTTTCACTCTGAG TERM 923 864957 - 864973 + H 81 -7.3 -4.65666 | opp_overlap 864954 864960, overlap 864954 ATTGTGAGAAAACAT TAATGGC GTT GCCATTG TTGTTTTTTCACTCT YPDSF_0763 865280 - 865630 + | hypothetical protein TERM 924 865731 - 865714 - T 79 -8.4 -4.15703 | TGTGATAAATAAGAA GGTGGC GTAATG GCCACC TCAGACTGCTGACAA TERM 925 865821 - 865795 - T 72 -10.1 -2.88849 | gap 1, opp_overlap 865803, overlap 865794 865810 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGTTCG AGCCTACATGGATGT TERM 926 865899 - 865916 + T 100 -8.4 -5.26875 | TTGTCAATAACCTCA GGTGGC GTAATG GCCACC TTTTTTAATTACAAG YPDSF_0764 866619 - 865939 - | ribonuclease T TERM 927 866687 - 866670 - R 87 -8.4 -4.48987 | opp_overlap 866669 TTGTGATAAGTAAAA GGCACC GTCCGA GGTGCC CTTAAGTTAATCAGT YPDSF_0765 867105 - 866698 - | lactoylglutathione lyase TERM 928 866792 - 866774 - G 70 -4.6 -4.64676 | GGATCTTCAACAAAA GCAATAAT GGT ATTACCGC CTTTTACCGGGCCAG YPDSF_0766 867378 - 870332 + | insecticial toxin YPDSF_0767 871650 - 870553 - | N-ethylmaleimide reductase YPDSF_0768 872337 - 871738 - | TetR family transcriptional regulator TERM 929 872400 - 872381 - R 100 -5.7 -5.80364 | AGGTCAAGAAAAAAA TGCCAAC CAAGGC GCTGGCA TCAAGGCTATGGTCT YPDSF_0769 874197 - 872560 - | putative cell division protein TERM 930 874072 - 874061 - G 87 -4.4 -5.40072 | opp_overlap 874061 GTTGCTGCAAAAAAA TAGC TGTC GCTA TTGTCGAATCGGATC TERM 931 874375 - 874388 + G 80 -3.1 -5.27779 | overlap 874371 TAGGAGGCAGCGTGG CTCAG CAAC TTGAG TTTTTTGATATTCCC TERM 932 874411 - 874442 + G 100 -14.6 -4.51097 | gap 1, overlap 874436 ATATTCCCAGCCCCT GCCGCGGT-ATCTGT CAA ACAGATGACCGTGGC TTTTGTCGTGGTTGC YPDSF_0770 874245 - 874610 + | hypothetical protein YPDSF_0771 874742 - 875638 + | aldo/keto reductase TERM 933 875646 - 875674 + F 100 -8.9 -4.67942 | TCCCTTAATCTTTCT CTACGCCAATC GCGCTCA GACTGGCGTAG TTTTACTTTCTTCGG TERM 934 876274 - 876294 + F 81 -5.5 -5.24531 | opp_overlap 876277, overlap 876277 TTAATCCTTAAGAGG TAATGTATC GTT GATACATCA TTTTTTCTAAAGAAT YPDSF_0772 876436 - 876867 + | transcriptional regulator SlyA TERM 935 876959 - 876929 - T 100 -14.1 -5.34555 | opp_overlap 876933, overlap 876933 CCACAGTACAAAAAA CAAACCGGGGTTC GCAAT GAACCCCGGTTTT TACTGTTCTGATTTA TERM 936 876955 - 876933 - T 100 -14.9 -5.1471 | opp_overlap 876933, overlap 876929 AGTACAAAAAACAAA CCGGGGTTC GCAAT GAACCCCGG TTTTTACTGTTCTGA TERM 937 876933 - 876955 + T 100 -15.6 -4.90906 | opp_overlap 876933 876929 AGTACAAAAAACAAA CCGGGGTTCG CAA TGAACCCCGG TTTTTACTGTTCTGA YPDSF_0773 877478 - 877011 - | lipoprotein TERM 938 878462 - 878482 + G 70 -8.1 -3.69094 | GGCCTATGGCGGGCA GGGGGCCCC CTT GGTGCCCGC TTTCCATCATGCGTT anmK 878034 - 879146 + | anhydro-N-acetylmuramic acid kinase YPDSF_0775 879201 - 879518 + | lipoprotein YPDSF_0776 879540 - 880262 + | pyridoxamine 5'-phosphate oxidase TERM 939 881163 - 881149 - g 70 -8.6 -3.74693 | GCCGATGGCACTAAA TTCGGT AAA ACCGAA GGGGGTGCAGTCTGG TERM 940 881334 - 881319 - g 74 -2.5 -5.21506 | overlap 881329 AGAAGAAGATAAAAA CAGTG GTAAAG CACCG CGCGCGCAATATGTT YPDSF_0777 880444 - 881718 + | tyrosyl-tRNA synthetase TERM 941 881732 - 881753 + F 87 -5.1 -5.52384 | opp_overlap 881735, overlap 881735 AAGCGTAAAATAAGA GAAGGGGCA GAAA TGTCCCTTA TTTTTTTGCTGAGAC TERM 942 881735 - 881750 + F 82 -6.8 -4.8487 | opp_overlap 881735, overlap 881732 CGTAAAATAAGAGAA GGGGCA GAAA TGTCCC TTATTTTTTTGCTGA YPDSF_0778 881873 - 882733 + | pyridoxamine kinase TERM 943 882745 - 882775 + T 100 -15.6 -3.51694 | opp_overlap 882742, overlap 882742 GTAATCTAACCATTT TCAATTGCCCCC TAGTGAT GGGGGCAATTGA TTGATTCTCATTATT YPDSF_0779 883398 - 882793 - | glutathionine S-transferase TERM 944 883508 - 883537 + r 72 -9.3 -3.16553 | opp_overlap 883502, overlap 883507 GGGGCAATACAAGTC CTACAGCGGTG ATGATTTC CCCCGCTGTAG TGTATTGATAGTTGT YPDSF_0780 883906 - 883643 - | hypothetical protein TERM 945 884018 - 884006 - R 74 -4.8 -4.84492 | TTAATGACAATAAAA GCCT GTTAG AGGC TCCAATGCTGATGGA YPDSF_0781 884742 - 884152 - | hypothetical protein TERM 946 884967 - 884986 + r 81 -9.2 -3.77607 | opp_overlap 884968, overlap 884968 CTAACTAGCACTAAA AGCGCTCC CGCA GGAGCGCG TTTAGTCAGCTTATT TERM 947 884968 - 884985 + r 89 -12.7 -2.85841 | opp_overlap 884968, overlap 884967 TAACTAGCACTAAAA GCGCTCC CGCA GGAGCGC GTTTAGTCAGCTTAT TERM 948 884985 - 884968 - R 100 -12.7 -4.33105 | opp_overlap 884968 884967 TAACTAGCACTAAAA GCGCTCC CGCA GGAGCGC GTTTAGTCAGCTTAT tppB 886496 - 884997 - | putative tripeptide transporter permease YPDSF_0783 888419 - 887139 - | hypothetical protein TERM 949 888768 - 888749 - R 100 -12.2 -3.96534 | overlap 888744 GTTAAAAGAAGATAA CCGCTATC AAAA GATAGCGG GGAGGTTAACCACCG YPDSF_0784 889624 - 888809 - | peptide transport system ATP-binding protein YPDSF_0785 890616 - 889624 - | peptide transport system ATP-binding protein TERM 950 890247 - 890234 - G 79 -8.1 -4.42238 | opp_overlap 890235 TTACGCCAATGAAAA CGCTG CCAC CAGCG GCCTTTATATGTCCA YPDSF_0786 891506 - 890616 - | peptide transport system permease protein YPDSF_0787 892458 - 891493 - | peptide transport system permease protein YPDSF_0788 894101 - 892455 - | peptide transport periplasmic protein precursor TERM 951 894540 - 894554 + H 70 -5.8 -4.28361 | ATTTACAATTGATAT TGATAA GTA TTATCA TTTTGATGCGATTCA TERM 952 894641 - 894658 + H 100 -8.4 -5.24129 | CTTCCAGTATTTTAA GCCAGC TCGGGT GCTGGC TTTTTTGTGCCCAGA TERM 953 894695 - 894677 - H 100 -16 -4.36914 | opp_overlap 894677 TTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC TERM 954 894677 - 894695 + H 100 -16 -3.07307 | opp_overlap 894677 TTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC YPDSF_0789 894808 - 895266 + | transposase for the IS1541 insertion element TERM 955 895340 - 895372 + T 100 -11.3 -4.20696 | opp_overlap 895347, overlap 895344 895346 895347 895360 CCTTATAGGCGCATA TGAAAAACCTCCGGC TAT GCCGGAGGATATTTA TTTTACCCTTCGTCC TERM 956 895344 - 895368 + T 100 -9.9 -4.68655 | opp_overlap 895347, overlap 895340 895346 895347 895360 ATAGGCGCATATGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTTTACCCTTC TERM 957 895346 - 895366 + T 100 -12.5 -3.94471 | opp_overlap 895347, overlap 895344 895340 895347 895360 AGGCGCATATGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTTTACCCT TERM 958 895347 - 895365 + T 100 -16 -2.95598 | opp_overlap 895347, overlap 895346 895344 895340 895360 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTTACCC TERM 959 895365 - 895347 - T 100 -16 -4.8048 | opp_overlap 895347 895346 895344 895340 895360 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTTACCC pspF 896459 - 895431 - | phage shock protein operon transcriptional activator YPDSF_0791 896704 - 897369 + | phage shock protein PspA pspB 897531 - 897758 + | phage shock protein B TERM 960 897805 - 897785 - g 83 -5.3 -5.1675 | overlap 897787 TTAGGCAGTAAAAAA CTGTACCGG GTA CCGGAAGAG GGCATGATCAAAGGG TERM 961 897871 - 897892 + G 76 -3.1 -5.09173 | gap 1, overlap 897872 AGTACGGTTGGTTCG C-GTGATAAT GGT GTTATCACTG TTTTTTGGCCTATTC TERM 962 897872 - 897890 + G 71 -6.8 -4.16351 | overlap 897871 GTACGGTTGGTTCGC GTGATAAT GGT GTTATCAC TGTTTTTTGGCCTAT YPDSF_0793 897758 - 898117 + | DNA-binding transcriptional activator PspC YPDSF_0794 898202 - 898444 + | peripheral inner membrane phage-shock protein TERM 963 898722 - 898753 + G 74 -7.3 -4.1899 | gap 1, opp_overlap 898706 TGGCCAACGCCGACC CGTGGCGTCAG-CG AAATC CGTCTGGCGTTACG TTTTCGCTCCAGTGA YPDSF_0795 898425 - 899822 + | hypothetical protein TERM 964 900459 - 900441 - g 75 -8.8 -3.85817 | opp_overlap 900454 900455 AGGCTCGGGCAGAAA TCAGCCGC TAT GCTGCTGA ATCAGCGTTGATGAT YPDSF_0796 899819 - 900880 + | hypothetical protein YPDSF_0797 901348 - 900890 - | hypothetical protein YPDSF_0798 901856 - 901410 - | hypothetical protein YPDSF_0799 902192 - 903769 + | DNA-binding transcriptional regulator TyrR TERM 965 903849 - 903803 - T 95 -7.2 -5.5762 | opp_overlap 903817 903848, overlap 903810 903814 903816 903817 ATCAAACATAAAAAA GAGTAAATAAATATCCTCCGGC ATA GCCGGAGGTTTTTCATATGCGC CTATAAGGCTCTGTT TERM 966 903842 - 903810 - T 100 -11.3 -4.20024 | opp_overlap 903817, overlap 903803 903814 903816 903817 ATAAAAAAGAGTAAA TAAATATCCTCCGGC ATA GCCGGAGGTTTTTCA TATGCGCCTATAAGG TERM 967 903838 - 903814 - T 100 -9.9 -4.60648 | opp_overlap 903817, overlap 903810 903803 903816 903817 AAAAGAGTAAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCATATGCGCCTAT TERM 968 903836 - 903816 - T 100 -12.5 -3.88114 | opp_overlap 903817, overlap 903814 903810 903803 903817 AAGAGTAAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 969 903835 - 903817 - T 100 -16 -2.91241 | opp_overlap 903817, overlap 903816 903814 903810 903803 AGAGTAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 970 903817 - 903835 + T 100 -16 -4.8048 | opp_overlap 903817 903816 903814 903810 903803 AGAGTAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC YPDSF_0800 904374 - 903916 - | transposase for the IS1541 insertion element YPDSF_0801 905302 - 904523 - | transposase/IS protein TERM 971 905221 - 905235 + g 77 -11.4 -3.3506 | overlap 905234 CTGCCTGTTGTGACA GCGCAG GCG CTGCGC TTATAAGGCTTTCCA YPDSF_0802 906324 - 905302 - | transposase TERM 972 906346 - 906328 - R 100 -13.2 -4.01078 | AAAAGTGACCATAAA CTCTCCTG AAT CAGGAGAG CAGATTACCCCCTGG TERM 973 906446 - 906464 + r 100 -16 -4.37092 | opp_overlap 906446 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAT TERM 974 906464 - 906446 - R 100 -16 -3.07307 | opp_overlap 906446 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAT TERM 975 906510 - 906486 - R 100 -7.8 -5.55769 | gap 1, opp_overlap 906486 GGGCACAATAAAAAA CGGCTGTACCC GAGT GGGG-CAGCCG TTTTGAGTCACGATA TERM 976 906486 - 906510 + r 88 -10 -4.18494 | gap 1, opp_overlap 906486 GGGCACAATAAAAAA CGGCTGTACCC GAGT GGG-GCAGCCG TTTTGAGTCACGATA tpx 907089 - 906586 - | thiol peroxidase TERM 977 907195 - 907175 - H 70 -2.5 -5.01732 | overlap 907176 AAGTTCGCTAAAAAA CCCGTTTAA AGA CTTAACGGA TAAACGTATGAGGGT TERM 978 907217 - 907201 - H 71 -9.5 -2.98368 | overlap 907200 ACTTAACGGATAAAC GTATGAG GGT CTCATAC CTAAGCTAAAACTGT YPDSF_0804 907252 - 908226 + | mandelate racemase / muconate lactonizing protein YPDSF_0805 909038 - 908268 - | murein peptide amidase A YPDSF_0806 909416 - 911032 + | periplasmic murein peptide-binding protein TERM 979 911063 - 911093 + F 93 -9 -4.54323 | opp_overlap 911065, overlap 911065 911069 TGTTTTTAACTAATT AACAGAGGCGGATT TTA AATCCGCCTTTGCA TTTATTCTTGTCCTT TERM 980 911065 - 911091 + F 100 -16 -2.57496 | opp_overlap 911065, overlap 911063 911069 TTTTTAACTAATTAA CAGAGGCGGATT TTA AATCCGCCTTTG CATTTATTCTTGTCC TERM 981 911091 - 911065 - f 100 -13.8 -3.45366 | opp_overlap 911065 911063 911069 TTTTTAACTAATTAA CAGAGGCGGATT TTA AATCCGCCTTTG CATTTATTCTTGTCC TERM 982 911069 - 911087 + F 100 -13.2 -3.95772 | opp_overlap 911065, overlap 911065 911063 TAACTAATTAACAGA GGCGGATT TTA AATCCGCC TTTGCATTTATTCTT zntB 911245 - 912258 + | zinc transporter TERM 983 912456 - 912479 + G 100 -14 -5.60993 | ATTTAATTGTTACGG TGCCGATGTT GAAA AACATCGGCA TTTTTTTGTGCGCCG YPDSF_0808 912373 - 912582 + | hypothetical protein YPDSF_0809 913471 - 912632 - | regulatory protein TERM 984 913270 - 913284 + g 100 -7.2 -5.26875 | opp_overlap 913270 GGGATGAGTAATCCA TCAAGA TGC TCTTGA TTTTTTCATTAGAAA TERM 985 913666 - 913640 - R 80 -8.7 -3.9749 | gap 1, overlap 913641 AGGCAGAAGAGTAAA GCGTCCGCGCCA GTAG TGGCGCGGAT-C TAGCCCCCATGGAAG TERM 986 913780 - 913757 - R 71 -8.8 -3.38991 | opp_overlap 913758 913760, overlap 913755 913760 ACTTTGCCAATAACA TCAGTGGGCC ATTT GGCCCACTAT TTTTACTGGCTATGA TERM 987 913758 - 913779 + r 100 -10.1 -4.76041 | opp_overlap 913757 913755 913760, overlap 913760 CTTTGCCAATAACAT CAGTGGGCC ATTT GGCCCACTA TTTTTACTGGCTATG TERM 988 913777 - 913760 - R 89 -12.7 -2.85545 | opp_overlap 913758 913760, overlap 913757 913755 TTGCCAATAACATCA GTGGGCC ATTT GGCCCAC TATTTTTACTGGCTA TERM 989 913760 - 913777 + r 100 -12.7 -3.99327 | opp_overlap 913760 913757 913755, overlap 913758 TTGCCAATAACATCA GTGGGCC ATTT GGCCCAC TATTTTTACTGGCTA YPDSF_0810 914787 - 913783 - | hypothetical protein YPDSF_0811 915999 - 915058 - | C32 tRNA thiolase TERM 990 915083 - 915096 + g 74 -2.3 -5.09685 | TCCAACACATCAAGG CGTAC TGGT GGACG TTTTTCTGTGTCTTC TERM 991 915929 - 915939 + g 86 -8.2 -4.64144 | overlap 915914 GCTTGGCCGACGTTA CGGC GCA GCCG TTTTTGCAGCTTGTT TERM 992 916239 - 916214 - R 100 -13.4 -5.18995 | AAGATAATAGAAAAA GCCAGTTAGC GGTTTA GCTAACTGGC TCAGTAAATCGCACA YPDSF_0812 919807 - 916274 - | pyruvate-flavodoxin oxidoreductase TERM 993 917361 - 917346 - G 75 -10.4 -3.40403 | opp_overlap 917344 GGTGTTTCACCACAA CCGGAG CAGG CTCCGG AATATTCGAACAGCG YPDSF_0813 920286 - 920618 + | quaternary ammonium compound-resistance protein YPDSF_0814 921337 - 920678 - | putative Mg(2+) transport ATPase YPDSF_0815 921550 - 921963 + | lipoprotein YPDSF_0816 922473 - 922021 - | heat-inducible protein YPDSF_0817 923535 - 922543 - | D-lactate dehydrogenase TERM 994 926163 - 926177 + G 74 -11.4 -3.13908 | opp_overlap 926160 GTGAGAGCAATACTG TCGCCG GTG CGGCGA TTGACTGGTTGCGTT YPDSF_0818 923801 - 926497 + | hypothetical protein YPDSF_0819 926494 - 926688 + | lipoprotein YPDSF_0820 926698 - 927069 + | hypothetical protein YPDSF_0821 928661 - 927270 - | mannitol dehydrogenase TERM 995 927956 - 927979 + g 73 -3.1 -5.00616 | gap 1, overlap 927962 ATGATTCCCCCATCA CCGG-AGCGT TATCT ACGATACCGG TTTTTTCCAACACCC TERM 996 928722 - 928733 + H 70 -7.2 -3.86283 | ATAAATTCAATATTT GGGC ATTT GCCC TTTCGTGTAGGTTAA YPDSF_0822 928871 - 929827 + | transcriptional regulatory protein TERM 997 929849 - 929832 - T 100 -14.1 -5.35222 | AAAAGGCATAAAAAA GCGCGCC GGTT GGCGCGC AATCATCACATGGCT YPDSF_0823 930553 - 929948 - | azoreductase TERM 998 930637 - 930656 + H 72 -6.4 -4.3351 | overlap 930639 TTTTGCTACCAGTGA TAGCGCAA TATT TTGCGCTC TTTGTTCGATTTTAT TERM 999 930639 - 930654 + H 78 -9 -3.75005 | overlap 930637 TTGCTACCAGTGATA GCGCAA TATT TTGCGC TCTTTGTTCGATTTT TERM 1000 933320 - 933307 - g 76 -8.1 -4.19624 | opp_overlap 933305 933307 GAGTTGGAACACAAA TCCCG TCGG CGGGA TATTCTGGTCGATGA YPDSF_0824 931021 - 934863 + | ATP-dependent RNA helicase HrpA TERM 1001 934873 - 934913 + F 100 -8.4 -5.48514 | gap 1, overlap 934876 GTCTGATTGATGCCC CTATTCGACGCCTGAG-CT ATCT AGACTTAGGCGTCGAATTC TTTTTATTTCTTAGT TERM 1002 934876 - 934910 + F 100 -14.5 -4.78345 | gap 1, overlap 934873 TGATTGATGCCCCTA TTCGACGCCTGAG-CT ATCT AGACTTAGGCGTCGAA TTCTTTTTATTTCTT YPDSF_0825 935528 - 935851 + | DNA-binding phage-related protein YPDSF_0826 936743 - 935907 - | pepetidase TERM 1003 937009 - 936992 - R 100 -12.7 -5.24531 | opp_overlap 936992 936994 ACTCCTGATAAAAAA CACCCGG AGAA CCGGGTG TTGAGTGAATCATTT TERM 1004 936992 - 937009 + r 93 -12.7 -3.09208 | opp_overlap 936992, overlap 936994 ACTCCTGATAAAAAA CACCCGG AGAA CCGGGTG TTGAGTGAATCATTT TERM 1005 936994 - 937007 + r 72 -9.5 -3.10056 | opp_overlap 936992, overlap 936992 TCCTGATAAAAAACA CCCGG AGAA CCGGG TGTTGAGTGAATCAT YPDSF_0827 937373 - 937077 - | acid shock protein TERM 1006 937404 - 937419 + H 71 -8.2 -3.41051 | opp_overlap 937403 GTTCTATTCATATAC CGGCCC CGTT GGGTCG TTATAATCAGAGTAG YPDSF_0828 937977 - 938531 + | membrane protein YPDSF_0829 938557 - 939135 + | hypothetical protein TERM 1007 939173 - 939160 - T 91 -8.1 -4.85599 | opp_overlap 939147 939160 GTCACCTTATAAAAA GGAGC TTTG GCTCC TTTGAGGTTATTGAC TERM 1008 939160 - 939173 + T 70 -8.1 -3.72051 | opp_overlap 939160, overlap 939147 GTCACCTTATAAAAA GGAGC TTTG GCTCC TTTGAGGTTATTGAC TERM 1009 939253 - 939279 + T 72 -10.1 -2.88849 | gap 1, opp_overlap 939242, overlap 939248 939254 ACATCCATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCTCTGCC TERM 1010 939254 - 939280 + T 84 -10.1 -3.82218 | gap 1, opp_overlap 939242, overlap 939248 939253 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCTCTGCCT TERM 1011 939338 - 939365 + T 78 -9.2 -3.61715 | opp_overlap 939345, overlap 939325 939339 939345 GGGGTTTGTCAGCAG TCTGAAAGGAGC TTTG GCTCCTTTGAGG TTATTGAAAAAGCTA TERM 1012 939339 - 939364 + T 75 -10.5 -2.76815 | opp_overlap 939345, overlap 939338 939325 939345 GGGTTTGTCAGCAGT CTGAAAGGAGC TTTG GCTCCTTTGAG GTTATTGAAAAAGCT TERM 1013 939358 - 939345 - T 70 -8.1 -3.58343 | opp_overlap 939339 939338 939325 939345 GTCAGCAGTCTGAAA GGAGC TTTG GCTCC TTTGAGGTTATTGAA TERM 1014 939345 - 939358 + T 70 -8.1 -3.72051 | opp_overlap 939345, overlap 939339 939338 939325 GTCAGCAGTCTGAAA GGAGC TTTG GCTCC TTTGAGGTTATTGAA TERM 1015 939428 - 939441 + T 74 -8.1 -3.95435 | CCTCGGGGCGCTCCG GTGGC TTAC GCCAC TTATATTTTAACCCC TERM 1016 939903 - 939934 + T 86 -10.4 -3.79043 | opp_overlap 939907, overlap 939902 GTGTGAATTTTTTAG GATAGTTATATCCA TTTC TGAATATAACTATC TTTCGGTTAGTAATG TERM 1017 939979 - 939969 - T 75 -5.4 -4.78752 | ACTACAACTTAAAAA CCAA AAA TTGG ACTATGTTCTGGAGT YPDSF_0831 940318 - 939962 - | hypothetical protein YPDSF_0832 942945 - 940321 - | insecticidal toxin complex TERM 1018 941029 - 941054 + g 73 -6.1 -4.47328 | CAACCCCGTCGCATC CCGTTCCTTAC CAGA GTAGCGGACGG TTTTGTAATCCGCTT TERM 1019 941303 - 941316 + g 78 -3.8 -5.1861 | TGCAGGCCTTCCGTT TCCG TATCGC CGGA TTTTTTACTCCTCAG TERM 1020 942443 - 942455 + g 76 -4.7 -5.03314 | CTGACGCACGCGCCG GCCAG GTT CAGGC TTTTTTCCGCGTCAG TERM 1021 943784 - 943802 + H 100 -16 -3.07307 | opp_overlap 943784 ATTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC TERM 1022 943802 - 943784 - H 100 -16 -4.37092 | opp_overlap 943784 ATTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC YPDSF_0833 943915 - 944373 + | transposase for the IS1541 insertion element TERM 1023 944451 - 944475 + T 100 -9.9 -4.43877 | opp_overlap 944454, overlap 944453 944454 ATAGGCGCATATGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTTCCGAATTA TERM 1024 944453 - 944473 + T 100 -12.5 -3.81958 | opp_overlap 944454, overlap 944451 944454 AGGCGCATATGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTTCCGAAT TERM 1025 944454 - 944472 + T 100 -16 -2.88452 | opp_overlap 944454, overlap 944453 944451 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTCCGAA TERM 1026 944472 - 944454 - T 100 -16 -4.8048 | opp_overlap 944454 944453 944451 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTCCGAA YPDSF_0834 945994 - 944495 - | carboxypeptidase YPDSF_0835 947365 - 946088 - | sensor protein RstB YPDSF_0836 948139 - 947393 - | DNA-binding transcriptional regulator RstA TERM 1027 948627 - 948605 - g 82 -12 -3.646 | opp_overlap 948619, overlap 948606 CTGAATTAGAGAGAA CGCCGCAAGC TCA GCTTACGGCA TTGGCGCTGCAAGTA TERM 1028 948626 - 948606 - g 79 -13.3 -2.78278 | opp_overlap 948619, overlap 948605 TGAATTAGAGAGAAC GCCGCAAGC TCA GCTTACGGC ATTGGCGCTGCAAGT YPDSF_0837 948436 - 948852 + | hypothetical protein YPDSF_0838 950267 - 948876 - | amino acid antiporter TERM 1029 949729 - 949711 - G 80 -10.4 -3.68619 | GCTAAGCCAGTGAAA TCGATACT AAA AGTATCGA GGCTAAATGCGATGC TERM 1030 950530 - 950506 - R 82 -7.8 -4.4727 | overlap 950509 GCAACACGGATAAAA GAAGGGCAGC ACTTG GCCGCCCTTA AGATAATTATTTGAA TERM 1031 950527 - 950509 - R 88 -9.5 -4.33785 | overlap 950506 ACACGGATAAAAGAA GGGCAGC ACTTG GCCGCCC TTAAGATAATTATTT YPDSF_0839 951490 - 950537 - | hypothetical protein TERM 1032 953073 - 953048 - g 76 -3.2 -5.19879 | TTGCAAAGAGAAAAA CGGCGAGATC GATATT GATTTCGACG ATACCGTGATTCGCG pntA 952020 - 953546 + | NAD(P) transhydrogenase subunit alpha pntB 953619 - 955013 + | pyridine nucleotide transhydrogenase TERM 1033 955041 - 955068 + T 100 -15.6 -3.62046 | overlap 955042 AACATCCATTGTATT GCTCAGGGCCAC TTCG GTGGCCCTGAGG TTATTGACAAAGTGC TERM 1034 955042 - 955067 + T 100 -19.1 -2.77013 | overlap 955041 ACATCCATTGTATTG CTCAGGGCCAC TTCG GTGGCCCTGAG GTTATTGACAAAGTG TERM 1035 955140 - 955166 + T 72 -10.1 -2.88849 | gap 1, opp_overlap 955129, overlap 955135 955141 ACATCCATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCTCTGCC TERM 1036 955141 - 955167 + T 84 -10.1 -3.82218 | gap 1, opp_overlap 955129, overlap 955135 955140 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCTCTGCCT TERM 1037 955227 - 955250 + T 100 -13.2 -4.28049 | GGTTTGTCAGCAGTC TGAGGGCCAC TTCG GTGGCCCTTA TTTTAGGATTTTACG YPDSF_0842 956244 - 955288 - | universal stress protein UspE YPDSF_0843 957131 - 956379 - | fumarate/nitrate reduction transcriptional regulator YPDSF_0844 957722 - 957204 - | methylated-DNA--protein-cysteine methyltransferase YPDSF_0845 957963 - 959408 + | alkaline phosphatase TERM 1038 959433 - 959455 + F 100 -9.9 -4.96646 | gap 1 TATCTCACTGGAACG TCCCGGCGCA GTAA TG-GCCGGGA TTTTTGCTTATGTCC TERM 1039 959836 - 959852 + F 71 -8.7 -3.39908 | AATTAATGGGTTTTT CTGCTGT GTT ACGGCAG TCTGTTTTAAAAAAG YPDSF_0846 959954 - 962350 + | hypothetical protein YPDSF_0847 962481 - 963155 + | nucleotidase TERM 1040 963214 - 963172 - T 100 -15 -3.65046 | opp_overlap 963182 963212 963213, overlap 963173 TCCCTACTCGAATAA GCCCGTTAAACCCTGTCG GCAGTAA CGACAGGGTTTAACGTGT GACAACGTCACCTTT TERM 1041 963213 - 963173 - T 100 -18.5 -2.78813 | opp_overlap 963182 963212, overlap 963172 CCCTACTCGAATAAG CCCGTTAAACCCTGTCG GCAGTAA CGACAGGGTTTAACGTG TGACAACGTCACCTT TERM 1042 963182 - 963204 + T 82 -10.6 -3.63627 | opp_overlap 963173 963172 AATAAGCCCGTTAAA CCCTGTCG GCAGTAA CGACAGGG TTTAACGTGTGACAA YPDSF_0848 963569 - 963222 - | acetolactate synthase 1 regulatory subunit YPDSF_0849 965238 - 963571 - | acetolactate synthase catalytic subunit TERM 1043 964368 - 964384 + g 77 -10.9 -3.59979 | TAATATTGGCATGAG GGCAGAA TTG TTCTGCC TTTCCGATGGCCCGA TERM 1044 965294 - 965318 + H 100 -15 -3.6292 | gap 1, opp_overlap 965294 GGCGATAAAAAGAAA CCCCGCTCGGC TGGC GCCG-GCGGGG TTTGGGAATCTTTCT TERM 1045 965318 - 965294 - H 100 -15 -4.96501 | gap 1, opp_overlap 965294 GGCGATAAAAAGAAA CCCCGCTCGGC TGGC GCCG-GCGGGG TTTGGGAATCTTTCT YPDSF_0850 965833 - 966627 + | lipoprotein TERM 1046 966750 - 966724 - T 95 -7.9 -5.00616 | opp_overlap 966724 CTGCTGTTTAAAAAA TGCGCTTCTCC GTCGG GGAGTTGCGCA TTTTTGTGGCACGTT TERM 1047 966724 - 966750 + T 91 -7.9 -4.84017 | opp_overlap 966724 CTGCTGTTTAAAAAA TGCGCTTCTCC GTCGG GGAGTTGCGCA TTTTTGTGGCACGTT TERM 1048 968652 - 968669 + T 73 -8.4 -3.62616 | AGGCCAGAAGTGAGT CGCCAG TTCTTT CTGGCG TTGTGTGTCGTGGTG TERM 1049 968832 - 968806 - T 81 -9.4 -3.82604 | TCATCCAACGAATAA GCTGGATTTTCC TGA GGGCAATCCAGC AAGAAAGCACGGGCG YPDSF_0853 972403 - 969332 - | virulence factor TERM 1050 972213 - 972193 - G 76 -11.1 -3.30243 | ATTCAGGTTTCACAA TCTCAGGGG CTG CCCCTGGGA GCATCAGTGAATATT TERM 1051 972345 - 972333 - G 79 -7.7 -4.54727 | overlap 972335 GGCGTTAAAGCAAAA TCCAG GAA CTGGA TCCCACTATCCTGAA YPDSF_0854 973841 - 972408 - | virulence factor TERM 1052 973262 - 973276 + g 73 -5.6 -4.62904 | opp_overlap 973251 ATAACTCAACCGCTG CGGGTG TGA CAACCG TTTTTGCCCGTATTT TERM 1053 973503 - 973523 + g 72 -3.9 -4.77925 | overlap 973504 TTTCGCGAGTAATGC CCCGAACAA CTG TTGTGCGGC TTTTTCCGATTTTTT TERM 1054 974531 - 974513 - g 90 -11.8 -4.09243 | CAGATCTGGCTAAAA TCGGTGAT GGC ATCACCGA CGGAATTGAAACGAT TERM 1055 974880 - 974854 - g 73 -3 -5.00616 | overlap 974856 CTGGCGTGGAAAAAA CATCAGATGCCA GCC TATCACCTGATA GCCAAAAATGGGCAG YPDSF_0855 974029 - 975537 + | AMP nucleosidase TERM 1056 975589 - 975556 - T 100 -10.3 -4.74453 | gap 1, opp_overlap 975557 975559, overlap 975559 GAATAGATTGAAAAA CAACGCAGGCGGATGA TGA TCA-CCGCCTGCGTAT TGAATTGAGAGAGCT TERM 1057 975557 - 975588 + T 100 -13.8 -3.17075 | gap 1, opp_overlap 975556 975559, overlap 975559 AATAGATTGAAAAAC AACGCAGGCGGATGA TGA TCA-CCGCCTGCGTA TTGAATTGAGAGAGC TERM 1058 975559 - 975586 + T 100 -16.4 -3.14878 | gap 1, opp_overlap 975556 975559, overlap 975557 TAGATTGAAAAACAA CGCAGGCGGATGA TGA TCA-CCGCCTGCG TATTGAATTGAGAGA TERM 1059 975586 - 975559 - T 100 -16.4 -4.46215 | gap 1, opp_overlap 975559 975557, overlap 975556 TAGATTGAAAAACAA CGCAGGCGGATGA TGA TCA-CCGCCTGCG TATTGAATTGAGAGA YPDSF_0856 976780 - 975962 - | ATPase TERM 1060 976655 - 976643 - G 71 -6.3 -4.29493 | CAGTAAACAGACAAA TTCAC CAT GTGAA ATATGAAGATTTATT YPDSF_0857 977611 - 976790 - | transport system permease TERM 1061 977206 - 977186 - G 95 -2.3 -5.86965 | overlap 977187 ACTTATCAAAAAAAA TGCCGGCGG ATT CCCCAGGCC GAACCACAGCATCGC YPDSF_0858 978646 - 977615 - | hypothetical protein TERM 1062 977911 - 977932 + g 75 -8.7 -3.93583 | ACAGTTTAAGTACGC GAGCAGCCA CCTC TGGCTTCTC TTTATACATGGCTTC TERM 1063 978377 - 978402 + g 70 -10.5 -3.01708 | gap 1, opp_overlap 978376 978377 GGCCGCTATATCAAT TTGC-CCCGCGA CGA TTGCGGGAGCAA TATCTATCCCCTTTG YPDSF_0860 979579 - 980049 + | hypothetical protein YPDSF_0861 980122 - 981129 + | LacI family transcriptional regulator TERM 1064 982102 - 982112 + G 76 -8.2 -4.13945 | ATTAGCAATGGCGTG CCGG AAT CCGG TTTTAAGCTGGAAAT YPDSF_0862 981985 - 982230 + | hypothetical protein TERM 1065 982251 - 982271 + F 100 -9.7 -4.66537 | TTCCCTCCCTGCTAA GGCGTAGCA TCG TGGTACGCC TTTTATATTGAACAA TERM 1066 983107 - 983121 + G 74 -4.9 -4.85782 | TCTAGGATTAATGGC GGGCT TCAGC GGCCC TTTATTTTTAAAAGC YPDSF_0863 982376 - 983656 + | putative voltage-gated ClC-type chloride channel ClcB YPDSF_0864 984467 - 983799 - | dethiobiotin synthetase TERM 1067 984656 - 984680 + r 75 -10.3 -2.84602 | opp_overlap 984660 984663, overlap 984655 984663 GACCGAAGGTACCCA CTAATAATTAA CTC TTAATTATTAG ATTTAATACACTAGC YPDSF_0865 985860 - 984691 - | transcriptional regulator TERM 1068 986000 - 986013 + r 87 -5.3 -5.47846 | overlap 985985 TTATGTGATTTGCTG CACAT AATC ATGTG TTTTCTTTTTTCCTT YPDSF_0866 986952 - 986074 - | transcriptional regulator LYSR-type YPDSF_0867 987149 - 988267 + | membrane protein TERM 1069 989242 - 989229 - g 82 -3.7 -5.29782 | TACAGCTAGAAAAAA GCCTG AATG CTGGC CGAGCTGTTCCTCCA YPDSF_0868 988613 - 989587 + | DNA replication terminus site-binding protein TERM 1070 989644 - 989624 - T 79 -6.8 -4.62783 | opp_overlap 989624 TAGCCACTGTAAAAA CGCCGG TAATCCACC CCGGCG TTAATATAACAATGT fumC 991064 - 989667 - | fumarate hydratase TERM 1071 991705 - 991686 - g 70 -2.8 -4.86731 | gap 1, overlap 991690 TTTTGCTAAAGAAAA CCAGGCAGG TAT CCCAC-TGG ATGCGGCTGAGCGCA YPDSF_0870 991252 - 992523 + | mannose-6-phosphate isomerase TERM 1072 992650 - 992663 + F 71 -3.1 -5.07107 | GGCCTATATTATTTG GGAGA TATA TCTTC TTTTTTGGGGATTTC TERM 1073 993864 - 993846 - g 74 -7.4 -4.13748 | TGGAAAAATACTAAA GGGGAAAG TAC CTTTACCC TGAATATCGAACTGA TERM 1074 993949 - 993939 - g 79 -5.4 -5.00616 | CCCGCGGTGAAAAAA TTGG ACG CCAA CCTGAGCATTCCAAT YPDSF_0871 992763 - 994307 + | hypothetical protein TERM 1075 994330 - 994359 + T 91 -13.7 -2.51657 | opp_overlap 994336, overlap 994336 ATTATATTTGTTTGA TAAAAACGGAGCC CATT GGCTCCGTTTTAA ATCTCTATTCTCTTT TERM 1076 994336 - 994353 + T 100 -12.7 -4.27861 | opp_overlap 994336, overlap 994330 TTTGTTTGATAAAAA CGGAGCC CATT GGCTCCG TTTTAAATCTCTATT TERM 1077 994353 - 994336 - T 100 -12.7 -4.82901 | opp_overlap 994336 994330 TTTGTTTGATAAAAA CGGAGCC CATT GGCTCCG TTTTAAATCTCTATT YPDSF_0872 994955 - 994356 - | hypothetical protein TERM 1078 994805 - 994817 + g 100 -4.8 -5.98781 | TACCTTTATCTATTT CTGC TATAT GCAG TTTTTTTTCATTATC YPDSF_0873 996189 - 995161 - | membrane protein TERM 1079 995578 - 995598 + g 90 -6.1 -5.27923 | opp_overlap 995578, overlap 995580 CAACAAAATAGATGA CCGGTCAGT GAT ATTGACCAG TTTTTTGTGCCGTTC TERM 1080 996338 - 996311 - R 100 -7.8 -6.32976 | gap 1, opp_overlap 996309 996311 AAAAAAATAAAAAAA CTCTGGGCCAC GGAGATT GTG-CCCAGAG AGATATTTCCACCCT TERM 1081 996393 - 996409 + r 78 -2.2 -5.49569 | AAACATCAATTTTTA GCAATG ATCGG CAGTGC TTTTTTCTGTTGATC YPDSF_0874 997432 - 996383 - | putative oxidoreductase YPDSF_0875 998492 - 997560 - | DNA-binding transcriptional regulator AraC araG 1001347 - 999776 - | L-arabinose transporter ATP-binding protein TERM 1082 1000183 - 1000196 + g 70 -8.1 -3.71848 | GCAGCAACGCATTAT CCGCT TCCC AGCGG TTGTTAATCAGACAG YPDSF_0879 1002428 - 1001445 - | L-arabinose-binding periplasmic protein precursor TERM 1083 1002181 - 1002223 + g 74 -6.8 -4.38712 | GTACAAATAACAAAA CCTTGGGCACCACTGGCCGC CAG GCTGTCGATGGCGTTCAGGG TTTTCTCACCATCGG YPDSF_0880 1002836 - 1004539 + | ribulokinase YPDSF_0881 1004623 - 1006125 + | L-arabinose isomerase TERM 1084 1006189 - 1006173 - T 70 -5.1 -4.49311 | opp_overlap 1006180 1006183, overlap 1006174 1006185 ATCAGTATTATAAAA TTCGCTA TGA TAGCGAC ACCCTCAGAGGCCTG YPDSF_0882 1008453 - 1006315 - | toxin transport protein YPDSF_0883 1008847 - 1008455 - | toxin ABC transporter YPDSF_0884 1009824 - 1008823 - | hypothetical protein YPDSF_0885 1010175 - 1009849 - | RTX toxin ABC transporter ATP binding/permease subunits YPDSF_0886 1011907 - 1010123 - | hypothetical protein TERM 1085 1010948 - 1010933 - GH 82 -7.5 -4.65895 | overlap 1010935 CGTTTCAGTCAAAAA CGCGC CGTTTT GCGCG GCAAAACCACAGAGA TERM 1086 1011127 - 1011143 + gH 76 -10.9 -2.59793 | overlap 1011126 1011124 ATGTCAGGGCCGAAC CCGTGAT GAA ATCACGG ATATTATCTAACTCA YPDSF_0887 1012125 - 1012277 + | hypothetical protein TERM 1087 1012750 - 1012764 + G 71 -7.1 -4.21997 | overlap 1012755 AACACTCGGGTGGCC GCTGC TAGCT GCAGC TATTTTTGTTCCTTA TERM 1088 1012755 - 1012766 + G 80 -4.4 -5.1963 | overlap 1012750 TCGGGTGGCCGCTGC TAGC TGCA GCTA TTTTTGTTCCTTACA YPDSF_0888 1012382 - 1012825 + | hypothetical protein TERM 1089 1012900 - 1012925 + F 87 -5.4 -5.55855 | ATCTGTTGTCGTCGG GCCGTCAATT TTGGAT AATAGGCGGC TTTTATTTTTTTAGG YPDSF_0889 1012953 - 1013534 + | Na(+)-translocating NADH-quinone reductase subunit E TERM 1090 1013772 - 1013753 - g 86 -9.2 -4.54301 | GAAAAAATCAACAAA TGCGCGCC GGGT GGCGAGCA GGTGATGCTGAAACT YPDSF_0890 1013534 - 1014157 + | electron transport complex protein RnfB TERM 1091 1014525 - 1014513 - g 70 -9.1 -3.61398 | CGCTGGCGTGAACAA CAGCC GTG GGCTG ACTATCGCCAGCGCG TERM 1092 1015149 - 1015119 - g 77 -9.8 -3.6682 | opp_overlap 1015144 CTGTATTTACTTAAA TTGGCCGGTTTCAA GCC TCAAAACCCGCCAA TGGTGATTATGGGGG YPDSF_0891 1014150 - 1015895 + | electron transport complex protein RnfC YPDSF_0892 1016893 - 1016000 - | AraC family transcription regulator TERM 1093 1016583 - 1016605 + g 90 -8.4 -5.03314 | overlap 1016585 TTCATCTGGCGGAAG CTGTTTGGTG TCA CGCCAAACCG TTTTTTAAAGGTACG rnfD 1017382 - 1018476 + | electron transport complex protein RnfD YPDSF_0894 1018486 - 1019115 + | electron transport complex protein RnfG TERM 1094 1019142 - 1019129 - g 70 -3.1 -4.75174 | GAGTGAAGCGAAAAA CCTGT TAGC ACAAG GGTTGTGGAAAAATA TERM 1095 1019235 - 1019256 + G 70 -8.7 -3.59202 | AACGCATTGGGGCTG GGGTTAGCG ACCA CGCTAGTCC TTGTGTGTACCAATA YPDSF_0895 1019112 - 1019813 + | SoxR-reducing system protein RsxE TERM 1096 1019844 - 1019825 - g 85 -3.5 -5.48514 | ATGAATAAAGAAAAA CGTGTCA CTATTT TGACCCG TCTGCGGGATAACAA YPDSF_0896 1019810 - 1020451 + | endonuclease III YPDSF_0897 1021632 - 1020634 - | hypothetical protein TERM 1097 1021152 - 1021170 + g 70 -4.6 -4.66609 | opp_overlap 1021152 1021156 GGCTGTAATCAGACA GCAATAAA TCG TTTAATGC TTTTTGCGTACCATA YPDSF_0898 1022980 - 1021670 - | integral membrane protein TERM 1098 1022895 - 1022924 + g 86 -6.5 -4.95547 | gap 1, opp_overlap 1022882 1022898, overlap 1022898 ATCAGTAGCGGCAAG AGATGCCATACCGT TTT ACGGTA-GGCATTA TTTTCTTCTTGTAAC TERM 1099 1022898 - 1022921 + g 91 -10.4 -4.55653 | gap 1, opp_overlap 1022882 1022898, overlap 1022895 AGTAGCGGCAAGAGA TGCCATACCGT TTT ACGGTA-GGCA TTATTTTCTTCTTGT TERM 1100 1022921 - 1022898 - G 71 -10.4 -3.08073 | gap 1, opp_overlap 1022895 1022898, overlap 1022882 AGTAGCGGCAAGAGA TGCCATACCGT TTT ACGGTA-GGCA TTATTTTCTTCTTGT TERM 1101 1023871 - 1023881 + G 70 -3.2 -4.86033 | CTGAACCTGAAACAT TGGT TGA GCCA TTTTTATCCCGCTTT TERM 1102 1024064 - 1024053 - g 76 -7.2 -4.2828 | opp_overlap 1024053 CGCCACCCATTAAAA GGCG ACCG CGCC TTTCAGGCTGACCTA YPDSF_0899 1023639 - 1025573 + | exoribonuclease II TERM 1103 1025627 - 1025592 - f 71 -9.6 -3.03124 | opp_overlap 1025597, overlap 1025597 TCTTATGTTTTAACA TGATAGCCGTCGGAGG AATT CCCCCGACGGCTTTTT TAATGTTATGTTTGC TERM 1104 1025622 - 1025597 - f 100 -18.3 -2.9155 | opp_overlap 1025597, overlap 1025592 TGTTTTAACATGATA GCCGTCGGAGG AATT CCCCCGACGGC TTTTTTAATGTTATG TERM 1105 1025597 - 1025622 + F 100 -16.1 -5.30189 | opp_overlap 1025592 1025597 TGTTTTAACATGATA GCCGTCGGAGG AATT CCCCCGACGGC TTTTTTAATGTTATG TERM 1106 1027207 - 1027187 - gf 70 -7.5 -3.89346 | overlap 1027189 1027190 TCGTTACGCCAGAAA CACTGGCGA TGG TCGCCAAAG ATGTTGGTGAAAACT TERM 1107 1027205 - 1027189 - gf 73 -8.7 -3.53733 | overlap 1027187 1027190 GTTACGCCAGAAACA CTGGCGA TGG TCGCCAA AGATGTTGGTGAAAA TERM 1108 1027204 - 1027190 - gf 71 -10 -2.71918 | overlap 1027189 1027187 TTACGCCAGAAACAC TGGCGA TGG TCGCCA AAGATGTTGGTGAAA TERM 1109 1027733 - 1027723 - gf 73 -5.4 -4.74132 | opp_overlap 1027723 ATATTCCATGAAAAA CCAA GTA TTGG CTTCCTTGCTCAAGC YPDSF_0900 1025923 - 1027989 + | carbon starvation protein A YPDSF_0901 1027958 - 1028287 + | hypothetical protein TERM 1110 1028318 - 1028348 + T 100 -13.5 -4.18506 | overlap 1028321 1028341 AAATTAGTGACACCG TAACGCCCTATAG TGATT TTATAGGGCGTTA TTCTTTTACCGCTCA TERM 1111 1028321 - 1028345 + T 93 -10.8 -4.20868 | overlap 1028318 1028341 TTAGTGACACCGTAA CGCCCTATAG TGATT TTATAGGGCG TTATTCTTTTACCGC YPDSF_0902 1029192 - 1028404 - | fructose-6-phosphate aldolase YPDSF_0903 1029403 - 1029651 + | hypothetical protein TERM 1112 1029658 - 1029637 - T 70 -5.1 -4.56597 | CTCTGGCTGGAAAAA CCCGTGC AAGACTGA ACACGGG CTCATTATTTATGTT araD 1030375 - 1029680 - | L-ribulose-5-phosphate 4-epimerase YPDSF_0905 1030855 - 1031073 + | osmotically inducible lipoprotein B precursor TERM 1113 1031220 - 1031257 + T 95 -13.8 -2.87132 | gap 1, opp_overlap 1031220 1031225, overlap 1031225 ATTAGAAGTTCTAAA TAAAATACGGCGTTTGA CAATA TCA-ACGCCGTATTTTA TATCTGCGCGGAAAA TERM 1114 1031257 - 1031220 - T 100 -14.5 -3.62859 | gap 1, opp_overlap 1031220 1031225, overlap 1031225 ATTAGAAGTTCTAAA TAAAATACGGCGTTTGAC AAT ATCA-ACGCCGTATTTTA TATCTGCGCGGAAAA TERM 1115 1031252 - 1031225 - T 100 -10 -4.88405 | gap 1, opp_overlap 1031225 1031220, overlap 1031220 AAGTTCTAAATAAAA TACGGCGTTTGAC AAT ATCA-ACGCCGTA TTTTATATCTGCGCG TERM 1116 1031225 - 1031252 + T 100 -9.3 -4.60797 | gap 1, opp_overlap 1031220 1031225, overlap 1031220 AAGTTCTAAATAAAA TACGGCGTTTGA CAATA TCA-ACGCCGTA TTTTATATCTGCGCG YPDSF_0906 1031614 - 1031288 - | translation initiation factor Sui1 YPDSF_0907 1032351 - 1031614 - | orotidine 5'-phosphate decarboxylase YPDSF_0908 1032821 - 1033120 + | hypothetical protein TERM 1117 1033155 - 1033174 + T 71 -10 -2.63073 | opp_overlap 1033154 1033155, overlap 1033154 1033152 ACAACAGCTAACAAC CGGGTGGA CCCG TTCACCCG ATCTTATTAGCAAAG YPDSF_0909 1034411 - 1033242 - | hypothetical protein TERM 1118 1033786 - 1033796 + g 74 -2.4 -5.08824 | overlap 1033785 GCACATTGTTTATCC GCCG TTG CCGC TTTTTTCAGTAACCC YPDSF_0910 1034729 - 1034418 - | hypothetical protein YPDSF_0911 1035659 - 1034898 - | phosphatidylglycerophosphatase B TERM 1119 1036194 - 1036215 + G 72 -3.7 -4.77438 | opp_overlap 1036198, overlap 1036200 TGTAGCAGAAGCAAA GTTACCC ACTCCTTG GGGTGAC TTTTTAATGGTCGGT TERM 1120 1036642 - 1036626 - g 70 -4.3 -4.70626 | overlap 1036617 1036614 CAACAACCCTAAAAA GGTCGAG ATC CTCACCC AAGCGGGGATCAATA ribA 1036153 - 1036755 + | GTP cyclohydrolase II TERM 1121 1036813 - 1036787 - T 91 -10.2 -4.16033 | opp_overlap 1036787 GCGAAATAAGAATAA GGGTAGGTTCAA TAA TTATACCTACCC TTTAGAGGCTGATAA YPDSF_0913 1039591 - 1036919 - | aconitate hydratase TERM 1122 1039519 - 1039501 - G 77 -11.7 -3.11768 | opp_overlap 1039499 TGATATCACCCAACA CTGCCGC CAATT GCGGCAG GCTGTAGTAGTAATA YPDSF_0914 1040812 - 1039955 - | hypothetical protein cysB 1042122 - 1041148 - | transcriptional regulator CysB TERM 1123 1042475 - 1042429 - R 95 -13 -3.01422 | opp_overlap 1042443 1042474, overlap 1042440 1042442 1042443 CACTTGGATAAATTA GCCCAAATAAATATCCTCCGGC ATA GCCGGAGGTTTTTCATATGCGC CTATAAGGCTCTGTT TERM 1124 1042464 - 1042440 - R 100 -9.9 -4.44448 | opp_overlap 1042443, overlap 1042429 1042442 1042443 ATTAGCCCAAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCATATGCGCCTAT TERM 1125 1042462 - 1042442 - R 100 -12.5 -3.82628 | opp_overlap 1042443, overlap 1042440 1042429 1042443 TAGCCCAAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 1126 1042461 - 1042443 - R 100 -16 -2.88854 | opp_overlap 1042443, overlap 1042442 1042440 1042429 AGCCCAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 1127 1042443 - 1042461 + r 100 -16 -4.8048 | opp_overlap 1042443 1042442 1042440 1042429 AGCCCAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC YPDSF_0916 1043000 - 1042542 - | transposase for the IS1541 insertion element TERM 1128 1043113 - 1043131 + r 100 -16 -4.37092 | opp_overlap 1043113 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAT TERM 1129 1043131 - 1043113 - R 100 -16 -3.07307 | opp_overlap 1043113 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAT TERM 1130 1043169 - 1043153 - R 100 -9.4 -5.55769 | opp_overlap 1043152 1043153 GGGCACAATAAAAAA CCAGCC GCGAA GGCTGG CTTTACCGAGGTCAG YPDSF_0917 1045845 - 1043230 - | DNA topoisomerase I TERM 1131 1044906 - 1044917 + g 87 -4.4 -5.40072 | CATACAGGCGCTGTG CCAT CATC ATGG TTTTTTTCACACCAA TERM 1132 1045620 - 1045636 + g 76 -6.5 -4.55446 | GATCGACCCCCATAC GGTTGAC TAA GGCAACC TTTTCGTCTTTCTTC TERM 1133 1045868 - 1045882 + H 80 -5 -5.13344 | overlap 1045869 TTTACCTAAATTATT TCTTCT AAA AGAAGG TTTTTATCTTGCTGT YPDSF_0918 1046264 - 1046515 + | hypothetical protein TERM 1134 1046571 - 1046602 + T 73 -7.3 -4.18488 | opp_overlap 1046570 1046572, overlap 1046572 GGGTTGGTAGCAAAT AGCAGGGGGTA CCGTTCAGAT TACCCCCTGCA TTTATTGCCATCACT TERM 1135 1046601 - 1046572 - T 83 -10.8 -3.44848 | gap 1, opp_overlap 1046571 1046572, overlap 1046570 GGTTGGTAGCAAATA GCAGGGGGT-ACC GTTCA GATTACCCCCTGC ATTTATTGCCATCAC TERM 1136 1046572 - 1046601 + T 79 -10.8 -3.10611 | opp_overlap 1046572 1046570, overlap 1046571 GGTTGGTAGCAAATA GCAGGGGGTA CCGTTCAGAT TACCCCCTGC ATTTATTGCCATCAC YPDSF_0919 1047665 - 1046634 - | putative periplasmic protease TERM 1137 1047157 - 1047145 - G 77 -10.5 -3.54951 | opp_overlap 1047142, overlap 1047132 CAGGCCATCATATAA CCGCC ACT GGCGG CAACTTTATCAACCG TERM 1138 1047342 - 1047307 - G 85 -12.8 -3.67 | gap 1, overlap 1047305 1047310 GCAACGGCCAAAATA GCA-GAGATCTCTTCAC GTA ATGAAGAGACCTCCTGC GCCCCAATGCTCCCT TERM 1139 1047338 - 1047310 - G 80 -13.3 -2.93891 | overlap 1047307 1047305 ACGGCCAAAATAGCA GAGATCTCTTCAC GTA ATGAAGAGACCTC CTGCGCCCCAATGCT TERM 1140 1048469 - 1048456 - gH 76 -8.1 -4.21439 | overlap 1048444 GAACCCGAACACAAA TGCGG GCGA CCGCA TTCCCCGATGAAGAT YPDSF_0920 1047852 - 1048613 + | short chain dehydrogenase YPDSF_0921 1048576 - 1049220 + | cob(I)yrinic acid a,c-diamide adenosyltransferase TERM 1141 1049278 - 1049241 - T 75 -5.7 -4.63542 | gap 1, opp_overlap 1049241 1049241, overlap 1049244 TATAAGCGTTAAAAA TA-ATATTGCCGCAGTCC AAA AAACTGCGGCAATAAGCA TTATTCACGTCGCTA TERM 1142 1049274 - 1049244 - T 100 -15.6 -4.42235 | opp_overlap 1049241 1049241, overlap 1049241 AAGCGTTAAAAATAA TATTGCCGCAGTCC AAA AAACTGCGGCAATA AGCATTATTCACGTC YPDSF_0922 1050377 - 1049343 - | 23S rRNA pseudouridylate synthase B TERM 1143 1049611 - 1049633 + g 70 -9 -3.55801 | TTAAGATCCAGTTCA GTCCAGCCAC CCC GTGGCAGGCC TTTCGGCAAATTAAT TERM 1144 1050528 - 1050543 + r 83 -9 -4.16681 | ACTGGCACACACACT TGTCCG TGGC CGGACA TTTTACACTAATATT YPDSF_0923 1051344 - 1050724 - | hypothetical protein YPDSF_0924 1052296 - 1051361 - | hypothetical protein TERM 1145 1052636 - 1052650 + H 100 -11.4 -5.64274 | TGCAGATTGCTTCAG CCCGCT AAT AGCGGG TTTTTTTATGGATAG YPDSF_0925 1052712 - 1054277 + | anthranilate synthase component I YPDSF_0926 1054277 - 1054855 + | anthranilate synthase component II TERM 1146 1054943 - 1054925 - g 71 -5.3 -4.46854 | gap 1 TGAGCCAAGAAGAAA GCCAGCAA CTGT TTGC-GGC GATTGTACGTGGTGA TERM 1147 1055694 - 1055676 - g 73 -5.2 -4.63932 | opp_overlap 1055676 TATGCCGGAAGAAAA CCGTGACA TTT TAGCACGG TTGTTACAAGGTAAA trpD 1054870 - 1055868 + | anthranilate phosphoribosyltransferase YPDSF_0928 1055872 - 1057299 + | bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase YPDSF_0929 1057456 - 1058646 + | tryptophan synthase subunit beta TERM 1148 1059326 - 1059309 - g 79 -8.3 -4.4078 | opp_overlap 1059310 1059325 CCCGCGCAAGTAAAA GCCAGCC TGGC GGCGGGC GCGGCGGGTGCTATT trpA 1058646 - 1059452 + | tryptophan synthase subunit alpha TERM 1149 1059446 - 1059435 - f 72 -7.2 -3.91196 | opp_overlap 1059435 GTCACAGAGATGAAA GCGG CAAC CCGC AGCTAGTTATTATTT YPDSF_0931 1059466 - 1059615 + | hypothetical protein YPDSF_0932 1059795 - 1060109 + | lipoprotein TERM 1150 1060146 - 1060114 - T 89 -7 -5.30155 | gap 1, opp_overlap 1060119, overlap 1060117 1060119 TGATTAAGTAAAAAA CAGGA-GGAGGCGCA TAAC CGCACCTCCTTACTG CCCGCCTAACTGATG TERM 1151 1060140 - 1060119 - T 74 -10.1 -3.11487 | opp_overlap 1060119, overlap 1060117 1060114 AAGTAAAAAACAGGA GGAGGCGCA TAAC CGCACCTCC TTACTGCCCGCCTAA YPDSF_0933 1060903 - 1060256 - | outer membrane protein W TERM 1152 1060898 - 1060946 + g 93 -13.6 -4.03078 | gap 1, overlap 1060900 1060900 TTTTTTCATTATCCA TTC-CATTTGTAGGTATATTTAC GGGG GTGAATATACCTACAAATGAGTA TTTGTGATCTAATCG TERM 1153 1060900 - 1060943 + g 91 -16.4 -2.7558 | overlap 1060898 1060900 TTTTCATTATCCATT CCATTTGTAGGTATATTTAC GGGG GTGAATATACCTACAAATGA GTATTTGTGATCTAA TERM 1154 1060900 - 1060944 + g 100 -16.2 -3.60505 | gap 1, overlap 1060900 1060898 TTTTCATTATCCATT C-CATTTGTAGGTATATTTAC GGGG GTGAATATACCTACAAATGAG TATTTGTGATCTAAT TERM 1155 1060949 - 1060969 + r 73 -8.4 -3.57715 | CTACAAATGAGTATT TGTGATCT AATCG AGATCACA TCTTTCGTATCTTTT YPDSF_0934 1061215 - 1061000 - | hypothetical protein YPDSF_0935 1061377 - 1062147 + | hypothetical protein TERM 1156 1062222 - 1062200 - T 100 -16.4 -4.68593 | TGTATCATTCAAAAA CGCCTGATGT ATT ACATCAGGCG TTCAAACTGTAGACA YPDSF_0936 1062882 - 1062268 - | sulfate permease family protein YPDSF_0937 1063996 - 1062914 - | hypothetical protein YPDSF_0938 1064227 - 1064769 + | intracellular septation protein A YPDSF_0939 1064849 - 1065298 + | acyl-CoA thioester hydrolase TERM 1157 1065345 - 1065328 - f 100 -14.1 -4.12603 | TTGATCAAACAAGAA GGGCCGC AAAA GCGGCCC TGAGGTTGGTGACAG TERM 1158 1066628 - 1066649 + G 77 -10.1 -3.74693 | TTTATTATCGAGTTC GGTGACCGC CTGA GCGATCACC TTTAATACGGTGGCA YPDSF_0940 1065446 - 1066654 + | transposase for the IS285 insertion element YPDSF_0941 1067448 - 1066690 - | transport protein TonB YPDSF_0942 1067749 - 1068045 + | YciI-like protein YPDSF_0943 1068268 - 1068513 + | hypothetical protein TERM 1159 1068546 - 1068585 + T 100 -11 -6.15536 | opp_overlap 1068548 1068550 1068553 1068556, overlap 1068547 1068548 CGGTTGTAGACACTA GATATAATAATACGCCTA AAGC TAGGCGTATTATTATAAG TTTTTTTTGTTAATT TERM 1160 1068547 - 1068584 + T 100 -14.5 -4.25661 | opp_overlap 1068548 1068550 1068553 1068556, overlap 1068546 1068548 GGTTGTAGACACTAG ATATAATAATACGCCTA AAGC TAGGCGTATTATTATAA GTTTTTTTTGTTAAT TERM 1161 1068548 - 1068583 + T 100 -18 -3.12957 | opp_overlap 1068548 1068550 1068553 1068556, overlap 1068547 1068546 GTTGTAGACACTAGA TATAATAATACGCCTA AAGC TAGGCGTATTATTATA AGTTTTTTTTGTTAA TERM 1162 1068583 - 1068548 - T 100 -18 -2.88999 | opp_overlap 1068548 1068547 1068546, overlap 1068550 1068553 1068556 GTTGTAGACACTAGA TATAATAATACGCCTA AAGC TAGGCGTATTATTATA AGTTTTTTTTGTTAA TERM 1163 1068581 - 1068550 - T 100 -16.2 -2.99545 | opp_overlap 1068548 1068547 1068546, overlap 1068548 1068553 1068556 TGTAGACACTAGATA TAATAATACGCCTA AAGC TAGGCGTATTATTA TAAGTTTTTTTTGTT TERM 1164 1068578 - 1068553 - T 100 -13.5 -3.63762 | opp_overlap 1068548 1068547 1068546, overlap 1068550 1068548 1068556 AGACACTAGATATAA TAATACGCCTA AAGC TAGGCGTATTA TTATAAGTTTTTTTT TERM 1165 1068575 - 1068556 - T 90 -10.8 -3.94067 | opp_overlap 1068548 1068547 1068546, overlap 1068553 1068550 1068548 CACTAGATATAATAA TACGCCTA AAGC TAGGCGTA TTATTATAAGTTTTT YPDSF_0944 1068892 - 1068629 - | hypothetical protein YPDSF_0945 1069138 - 1069010 - | hypothetical protein YPDSF_0946 1069652 - 1069113 - | attachment invasion locus protein precursor TERM 1166 1070059 - 1070043 - H 100 -8.7 -5.48213 | opp_overlap 1070042 1070045 GATTCAAAACAAAAA CAGCCTC ATA GAGACTG CCTTATTACCATAAT TERM 1167 1070480 - 1070454 - H 84 -10.1 -3.82218 | gap 1, opp_overlap 1070463, overlap 1070455 1070470 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 1168 1070481 - 1070455 - H 72 -10.1 -2.88849 | gap 1, opp_overlap 1070463, overlap 1070454 1070470 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT cls 1070699 - 1072159 + | cardiolipin synthetase YPDSF_0948 1072294 - 1072647 + | dsDNA-mimic protein TERM 1169 1072705 - 1072673 - T 71 -9.1 -3.31416 | opp_overlap 1072673 1072674, overlap 1072676 AAAATAAAGAGTTAA TCATTGCCCCATAGT TCA ACCCCGGGGCAATGT ATCTTAATTATCCTT TERM 1170 1072702 - 1072676 - T 70 -9.4 -2.8084 | opp_overlap 1072674 1072673, overlap 1072673 ATAAAGAGTTAATCA TTGCCCCATAGT TCA ACCCCGGGGCAA TGTATCTTAATTATC TERM 1171 1072854 - 1072821 - T 100 -16.9 -3.80114 | overlap 1072822 CAGCAATCGAGTAAA TCCTCAGTCACTTAG ATAA CTAAGTGACTGAGGT GAGCAAGAGCAGCTC TERM 1172 1072853 - 1072822 - T 100 -20.4 -2.87586 | overlap 1072821 AGCAATCGAGTAAAT CCTCAGTCACTTAG ATAA CTAAGTGACTGAGG TGAGCAAGAGCAGCT YPDSF_0949 1073161 - 1072946 - | hypothetical protein TERM 1173 1073261 - 1073245 - R 77 -4.5 -5.05228 | opp_overlap 1073240 1073245 1073254 ATTAAATGACAAAAA CACATTA ACT TAATATG TTTTAATTCGTCAAT YPDSF_0950 1074723 - 1073722 - | oligopeptide transport ATP-binding protein TERM 1174 1073761 - 1073751 - G 70 -8.2 -3.794 | CTTTAAGGCACGAAA CCGC GTG GCGG AAACTCCCTTCTAAT oppD 1075721 - 1074720 - | oligopeptide transporter ATP-binding component TERM 1175 1075260 - 1075270 + g 70 -3.2 -4.7497 | GCGCATACGTTTACG TGCT TCG GGCA TTTTTACTGCATCAA YPDSF_0952 1076638 - 1075733 - | oligopeptide transport system permease protein oppB 1077577 - 1076657 - | oligopeptide transporter permease YPDSF_0954 1079301 - 1077664 - | periplasmic oligopeptide-binding protein precursor TERM 1176 1080117 - 1080082 - R 80 -2.6 -5.49809 | gap 1, overlap 1080083 CAAAGCGGAAAAAAA GGAGAAGGCCACCAA GAATAGT TCAGTGGCCT-CTCG AAAATTCTGAATGGT YPDSF_0955 1080782 - 1080138 - | hypothetical protein TERM 1177 1080822 - 1080812 - H 74 -4 -5.08088 | overlap 1080815 AATTGCTAATAAAAA TATC ACC GATA ACAGTGCATTATAAC TERM 1178 1082067 - 1082033 - g 83 -8.7 -4.33621 | gap 2, opp_overlap 1082054 1082055, overlap 1082020 GACGCAACCAATAAA GCTGCGGATATCGTGCT TCA AGC-CGCTATC-GCAGC AGGTGCGCCAGCGGA TERM 1179 1083380 - 1083345 - g 77 -9.1 -4.10007 | opp_overlap 1083356, overlap 1083356 ATAAGTTCCCGAAAA TGGGTGTAAAAGCGA AATTGG TCGCTATTACAACCA CATCAGGTACCGGTT YPDSF_0956 1081589 - 1084264 + | bifunctional acetaldehyde-CoA/alcohol dehydrogenase TERM 1180 1084355 - 1084314 - T 86 -6 -5.27477 | gap 2, opp_overlap 1084322, overlap 1084315 1084322 AGGGTAAGCAAAAAA TGATATAACCCCCGATGAGC AGCC GCTGATCGGGGGTT-T-TCT TTTACAGACCAATTA TERM 1181 1084354 - 1084315 - T 81 -9.5 -3.75402 | gap 2, opp_overlap 1084322, overlap 1084314 1084322 GGGTAAGCAAAAAAT GATATAACCCCCGATGAGC AGCC GCTGATCGGGGGTT-T-TC TTTTACAGACCAATT TERM 1182 1084349 - 1084322 - T 100 -15.6 -3.74447 | opp_overlap 1084322, overlap 1084315 1084314 CAAAAAATGATATAA CCCCCGATGAGC AGCC GCTGATCGGGGG TTTTCTTTTACAGAC TERM 1183 1084322 - 1084349 + T 100 -15.6 -5.07652 | opp_overlap 1084315 1084314 1084322 CAAAAAATGATATAA CCCCCGATGAGC AGCC GCTGATCGGGGG TTTTCTTTTACAGAC YPDSF_0957 1085605 - 1085015 - | thymidine kinase TERM 1184 1086638 - 1086616 - g 77 -10.6 -3.5394 | overlap 1086605 1086622 AAAGCTGCTGGTAAA GCAAAACGTG CTG CACGTCCTGC TAAATATCAGTATAA TERM 1185 1086632 - 1086622 - g 76 -6.8 -4.54727 | overlap 1086616 GCTGGTAAAGCAAAA CGTG CTG CACG TCCTGCTAAATATCA YPDSF_0958 1086355 - 1086783 + | global DNA-binding transcriptional dual regulator H-NS TERM 1186 1086821 - 1086800 - T 84 -10.1 -3.74693 | TGCCACCGTATTAAA GGTGATCGC TCAG GCGGTCACC GAACTCGATAATAAA YPDSF_0959 1088003 - 1086795 - | transposase for the IS285 insertion element TERM 1187 1088118 - 1088141 + r 100 -15.4 -5.88197 | opp_overlap 1088118 CTATTACTATCGAAA CACCCTCCTA TTAA TAGGAGGGTG TTTTTTTGTCTTTCA TERM 1188 1088141 - 1088118 - R 100 -15.4 -3.69323 | opp_overlap 1088118 CTATTACTATCGAAA CACCCTCCTA TTAA TAGGAGGGTG TTTTTTTGTCTTTCA YPDSF_0960 1089866 - 1088520 - | nucleotide sugar dehydrogenase YPDSF_0961 1091189 - 1090173 - | response regulator of RpoS TERM 1189 1091994 - 1091974 - H 95 -7.6 -4.9138 | opp_overlap 1091976 AGTACGCAAACAAAA TAACCACC ATAAA GGTGGCTA TTCAGCGTAAACATT YPDSF_0962 1092523 - 1092987 + | hypothetical protein purU 1093071 - 1093919 + | formyltetrahydrofolate deformylase TERM 1190 1095738 - 1095759 + G 77 -10.1 -3.74693 | TTTATTATCGAGTTC GGTGACCGC CTGA GCGATCACC TTTAATACGGTGGCA YPDSF_0964 1094556 - 1095764 + | transposase for the IS285 insertion element YPDSF_0965 1096843 - 1095983 - | LysR family transcriptional regulator TERM 1191 1096690 - 1096702 + g 86 -6.3 -5.17054 | TCATGCCAAATTTCT CTCTT TTA AAGAG TTTTTTCCCTATTAT TERM 1192 1097800 - 1097812 + G 73 -3.3 -5.0538 | GAAGACGTCAGCCAG CATGG TTA CCACG TTTTTTACCATGGGC TERM 1193 1097878 - 1097866 - g 77 -9.1 -4.015 | CTATTGACGAAAGAA CAGCC ACT GGCTG TGCGCCGAGGTTTCC YPDSF_0966 1097653 - 1098459 + | exonuclease III YPDSF_0967 1098557 - 1098943 + | pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase YPDSF_0968 1099246 - 1098956 - | hypothetical protein YPDSF_0969 1101171 - 1099243 - | DNA topoisomerase III YPDSF_0970 1102160 - 1101246 - | selenide, water dikinase TERM 1194 1101970 - 1101958 - G 86 -3.4 -5.61596 | ATCGGCATAAAAAAA TCAG TCGTG CTGA TAATGCCAACACCGT YPDSF_0971 1102936 - 1102385 - | hypothetical protein YPDSF_0972 1103099 - 1104949 + | protease 4 TERM 1195 1104978 - 1104999 + F 100 -14.5 -4.7497 | opp_overlap 1104972 1104968 ATACAGATAGATATT CAGCCCGAT ACCC ATCGGGCTG TTTTTCCTCGCTGAG ansA 1105066 - 1106082 + | cytoplasmic asparaginase I YPDSF_0974 1106097 - 1106744 + | nicotinamidase/pyrazinamidase TERM 1196 1106763 - 1106784 + T 100 -13 -5.47159 | opp_overlap 1106763 CTTTCTGCGCAAAAA TGGGCGCC TGCCTC GGCGCCCA TTTTTTGTATTCAGA TERM 1197 1106784 - 1106763 - T 100 -13 -4.56597 | opp_overlap 1106763 CTTTCTGCGCAAAAA TGGGCGCC TGCCTC GGCGCCCA TTTTTTGTATTCAGA YPDSF_0975 1107252 - 1106878 - | hypothetical protein YPDSF_0976 1107634 - 1107221 - | methionine sulfoxide reductase B TERM 1198 1107714 - 1107696 - H 82 -2.4 -5.70522 | AATAATAACAAAAAA TTAACAAC AAA GCAGTTAA AATTGTCCTAAACTG YPDSF_0977 1107982 - 1108977 + | glyceraldehyde 3-phosphate dehydrogenase A TERM 1199 1109021 - 1109004 - f 90 -11.3 -3.65529 | opp_overlap 1109004 AGATTTCTACCTAAA GCCACTC ACGC GAGTGGC TTTTCTTGTTTATAG TERM 1200 1109004 - 1109021 + F 100 -11.3 -5.05116 | opp_overlap 1109004 AGATTTCTACCTAAA GCCACTC ACGC GAGTGGC TTTTCTTGTTTATAG YPDSF_0978 1109291 - 1110166 + | hypothetical protein TERM 1201 1110193 - 1110209 + T 93 -13.7 -2.78495 | opp_overlap 1110193, overlap 1110190 1110188 CGGTCAATATAAAAA TGGGGCC TTT GGCCCCA TGGTCTTGCTCATAG TERM 1202 1110209 - 1110193 - T 100 -13.7 -5.0916 | opp_overlap 1110190 1110188 1110193 CGGTCAATATAAAAA TGGGGCC TTT GGCCCCA TGGTCTTGCTCATAG YPDSF_0979 1111009 - 1110239 - | hypothetical protein TERM 1203 1111690 - 1111662 - g 70 -10.4 -3.01712 | opp_overlap 1111660 TCCTGCGTTTGAAGA GTTCTATGGCAT GGAGG AAGCCATAGAAC AGATTGTTTCTTATC YPDSF_0980 1111432 - 1113366 + | hypothetical protein TERM 1204 1113468 - 1113411 - f 74 -9.9 -3.14307 | gap 1 AGGAAGGCAAAACTA TG-CACTACGTCCTTGGCGTTGCCGC TAACCAT GCTGTAACGCCAAGGACAAAGGGACA GTGTGAGGCCGGTGG YPDSF_0981 1113516 - 1114790 + | hypothetical protein TERM 1205 1114802 - 1114840 + F 78 -5.3 -4.9792 | opp_overlap 1114802 TTAGCAGCAATATCA GCCGGTTAATTTTTTCT TGTTC AGAAAGCATTTTCCGGC TTTTTCTATGGGCTA TERM 1206 1115384 - 1115399 + G 71 -6.8 -4.20084 | CAATTTGCCGGATTA TGGCCG ACGC TGGCCA TTTTAGGTGCCTGCT YPDSF_0982 1114898 - 1116016 + | membrane protein YPDSF_0983 1116956 - 1116051 - | LysR family transcriptional regulator TERM 1207 1117184 - 1117163 - g 80 -2.9 -5.3671 | AAGATAATGAAAAAA GTTCAAGGT ATTT ACCGTGCAC CTCGTCAACATTGGG YPDSF_0984 1117154 - 1118023 + | hypothetical protein TERM 1208 1118049 - 1118085 + F 100 -15.4 -5.5112 | CCGCCATTACCTGTC TGCTATTACCTGTCTA CCCTC TGGGCAGGTAATAGCA TTTTTTATTGATGAG YPDSF_0985 1118288 - 1119490 + | multidrug resistance protein TERM 1209 1119537 - 1119491 - T 83 -9.6 -3.98291 | opp_overlap 1119488, overlap 1119492 AACAACGGCAAATAA TCGCGTTACACGATATTAAC GGATGGG GTGAATATCGTGTAACGGGG CAATATTCAGTGGCT TERM 1210 1119536 - 1119492 - T 95 -13.1 -2.9789 | opp_overlap 1119488, overlap 1119491 ACAACGGCAAATAAT CGCGTTACACGATATTAAC GGATGGG GTGAATATCGTGTAACGGG GCAATATTCAGTGGC YPDSF_0986 1120810 - 1119506 - | D-amino acid dehydrogenase small subunit TERM 1211 1120026 - 1120006 - G 77 -8.9 -3.97368 | overlap 1120018 CCTTCAATGGATAAA CCGGGATAG ACA CCAGCCCGG CCAGTAGCGCGGTAG YPDSF_0987 1121276 - 1122811 + | hypothetical protein TERM 1212 1122858 - 1122842 - T 100 -10.1 -5.04385 | GACATCGGTAAAAAA GGGGCAT TAA ACGCCCC TCAGACTGCTGACAA YPDSF_0988 1123748 - 1123029 - | fatty acid metabolism regulator TERM 1213 1123361 - 1123379 + g 70 -3 -4.88736 | overlap 1123352 CCACTGTTTTCGCTC GCGCCAAA ATT TCTTGCGC TTTTTCTGGATGATG TERM 1214 1124325 - 1124336 + G 71 -5.8 -4.32857 | opp_overlap 1124325 ATCTACTTTATGAAA CAGC TGCT GCTG TTTGTATTTACGAAA TERM 1215 1124458 - 1124473 + G 73 -3.2 -5.00846 | overlap 1124459 TAATCGCGGTAGTTA TCAGCG TATC CGTTGG TTTTTATACTATTTA TERM 1216 1125156 - 1125167 + G 78 -5.8 -4.74917 | GCCTCGCCTTCCGCT CAGC TATC GCTG TTTTATCTGTTTAAT TERM 1217 1125354 - 1125344 - g 72 -8.2 -3.83026 | opp_overlap 1125343 1125344 CGTGGCGACACCAAA CGGC CAG GCCG CTTTCTTGTTCCTGC nhaB 1123992 - 1125566 + | sodium/proton antiporter YPDSF_0990 1125787 - 1126332 + | disulfide bond formation protein B TERM 1218 1126358 - 1126376 + T 100 -11.7 -4.98522 | opp_overlap 1126358 TATCTTTATTATCAA TGGCGCC TCTCT GGCGCCA TTTTTATATCAGATT TERM 1219 1126376 - 1126358 - T 84 -11.7 -3.21416 | opp_overlap 1126358 TATCTTTATTATCAA TGGCGCC TCTCT GGCGCCA TTTTTATATCAGATT TERM 1220 1126697 - 1126662 - T 73 -8.5 -3.66378 | opp_overlap 1126662 1126661 1126657 CAGATTGGATTGAAA TCAGATCAACAGA TTTTCCATCC CCTGTTGATCTGA GTTTCATTAGTCAAT YPDSF_0991 1127105 - 1126749 - | hypothetical protein TERM 1221 1127177 - 1127196 + H 80 -6.4 -4.88067 | GTAAAAACCGCCATG GGTAAGGA CATA TCCTCACC TTTTTCTCCATGCAT TERM 1222 1127349 - 1127324 - H 70 -7.7 -3.65046 | opp_overlap 1127323 TGGCTATGTTAATAA TCATTATTCCT GCGC AGGAATAGTGA ATCTATTAAAGAAAA YPDSF_0992 1128197 - 1128937 + | hypothetical protein YPDSF_0993 1128954 - 1130153 + | aminotransferase YPDSF_0994 1130157 - 1131101 + | hypothetical protein TERM 1223 1131164 - 1131180 + F 81 -5.1 -5.0925 | overlap 1131166 GACTTGGTTTGTCGT TGCCTAC TTC GTGGGTA TTTTTGGTTTTCCGC YPDSF_0995 1131174 - 1131329 + | hypothetical protein TERM 1224 1131380 - 1131359 - T 78 -8.7 -3.827 | AACAATGAAGGTAAA GATGGCAGC TTAG GCTGTCATC GGCTAAAGCAATTTA YPDSF_0996 1131743 - 1131588 - | hypothetical protein YPDSF_0997 1132159 - 1131740 - | phage tail fiber assembly protein YPDSF_0998 1133087 - 1132170 - | hypothetical protein TERM 1225 1132867 - 1132883 + g 73 -5.1 -4.6821 | opp_overlap 1132867 ATAATTGCATAAGAG GAATCGG CCA CGGATTC TTTTATATTGCCATT YPDSF_0999 1134117 - 1133104 - | hypothetical protein YPDSF_1000 1137305 - 1134102 - | phage host specificity protein TERM 1226 1136704 - 1136725 + g 70 -4.3 -4.6902 | ATCTTGTCGGCAATG CGGCCAGAG TTGG CATTGGCTG TTTTTCGCCTTGTAC TERM 1227 1137340 - 1137324 - R 100 -12.3 -5.64274 | TCACCCATAAAAAAA GCCCACA AAG TGTGGGC ATTGGCGTGTTTATT TERM 1228 1137407 - 1137432 + r 84 -11.1 -3.58726 | TGTGTAAGGTCAGCC CACCCAAGCCG CGCA TGGCTAGGGTG TTATCTATCGGAGGA TERM 1229 1137744 - 1137781 + r 95 -12.9 -3.15999 | gap 1, opp_overlap 1137749 1137751, overlap 1137746 TGGTTTAAATCTTGA TAGCAGATCACT-GCCTC TTG GATGCTAGTGATCTGCTG TTGCATGTCTGACAC TERM 1230 1137746 - 1137779 + r 100 -13.3 -3.14125 | gap 1, opp_overlap 1137749 1137751, overlap 1137744 GTTTAAATCTTGATA GCAGATCACT-GCCTC TTG GATGCTAGTGATCTGC TGTTGCATGTCTGAC YPDSF_1001 1138497 - 1137877 - | phage tail assembly protein TERM 1231 1138531 - 1138516 - R 100 -8.2 -5.45652 | opp_overlap 1138516 ATCTCCAATAAAAAA GGCCGC CTAA GCGACC TCGATTTGTTTTACA YPDSF_1002 1139462 - 1138911 - | phage-related membrane protein TERM 1232 1139531 - 1139516 - R 80 -6.1 -4.85195 | opp_overlap 1139516 AAAATAACGCAAAAA CCCAC AGTTAA GTGGG TTGGGTTTTGTGTGA YPDSF_1003 1140568 - 1139561 - | hypothetical protein TERM 1233 1140889 - 1140877 - g 70 -9.1 -3.54408 | opp_overlap 1140875, overlap 1140873 CGTCATTGAAATCAA CCCCA CGG TGGGG CATAATTTCAAGTGT YPDSF_1004 1140825 - 1141364 + | phage regulatory protein TERM 1234 1141392 - 1141379 - T 100 -8.1 -5.46657 | GATGCCAATAAAAAA CCCAC CAGA GTGGG CTAGAATGCAAAAAC TERM 1235 1141402 - 1141425 + T 78 -5.2 -5.06414 | opp_overlap 1141407, overlap 1141407 AGTGGGCTAGAATGC AAAAACCCGC CGGA GCGGGTTTAG TTTTTATTCGGAGCA TERM 1236 1141407 - 1141420 + T 95 -9.5 -4.43037 | opp_overlap 1141407, overlap 1141402 GCTAGAATGCAAAAA CCCGC CGGA GCGGG TTTAGTTTTTATTCG TERM 1237 1141420 - 1141407 - T 100 -9.5 -4.78149 | opp_overlap 1141407 1141402 GCTAGAATGCAAAAA CCCGC CGGA GCGGG TTTAGTTTTTATTCG YPDSF_1005 1141634 - 1141443 - | hypothetical protein TERM 1238 1142143 - 1142126 - R 71 -3.4 -4.9218 | opp_overlap 1142141 TACTTATGACAAAAA CCGAAA TTTCGT CTTCGG TGTAACGGCATAACC YPDSF_1006 1143057 - 1142347 - | phage minor tail protein TERM 1239 1143034 - 1143044 + g 79 -6.8 -4.63586 | opp_overlap 1143033 GGCATGGGCCAATAT CGCT TTA AGCG TTTTATCTCTCATCT YPDSF_1007 1143812 - 1143060 - | hypothetical protein TERM 1240 1143854 - 1143830 - R 93 -9.9 -4.33417 | opp_overlap 1143833, overlap 1143832 1143833 TTCACCCATAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCATATGCGCCTAT TERM 1241 1143852 - 1143832 - R 100 -12.5 -3.76888 | opp_overlap 1143833, overlap 1143830 1143833 CACCCATAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 1242 1143851 - 1143833 - R 100 -16 -2.8541 | opp_overlap 1143833, overlap 1143832 1143830 ACCCATAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 1243 1143833 - 1143851 + r 100 -16 -4.8048 | opp_overlap 1143833 1143832 1143830 ACCCATAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC YPDSF_1008 1144390 - 1143932 - | transposase for the IS1541 insertion element TERM 1244 1144503 - 1144521 + r 100 -16 -4.37092 | opp_overlap 1144503 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAT TERM 1245 1144521 - 1144503 - R 100 -16 -3.07307 | opp_overlap 1144503 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAT TERM 1246 1144564 - 1144540 - R 93 -9.9 -4.30719 | opp_overlap 1144543, overlap 1144542 1144543 TCTGGGCACAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCATATGCGCCTAT TERM 1247 1144562 - 1144542 - R 100 -12.5 -3.75817 | opp_overlap 1144543, overlap 1144540 1144543 TGGGCACAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 1248 1144543 - 1144561 + r 100 -16 -4.8048 | opp_overlap 1144542 1144540 1144543 GGGCACAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 1249 1144561 - 1144543 - R 100 -16 -2.85008 | opp_overlap 1144543, overlap 1144542 1144540 GGGCACAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC YPDSF_1009 1145100 - 1144642 - | transposase for the IS1541 insertion element TERM 1250 1145231 - 1145213 - R 100 -16 -3.07307 | opp_overlap 1145213 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 1251 1145213 - 1145231 + r 100 -16 -4.36914 | opp_overlap 1145213 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 1252 1145251 - 1145268 + r 71 -8.3 -3.53224 | opp_overlap 1145251 1145266, overlap 1145264 1145265 CTGGGCACAAAAAAA GGCCGCC ATAA GGCAGCC TTTAGAAAGGGCGTG TERM 1253 1145268 - 1145251 - R 100 -10.5 -5.60993 | opp_overlap 1145251 1145264 1145265, overlap 1145266 CTGGGCACAAAAAAA GGCCGCC ATAA GGCAGCC TTTAGAAAGGGCGTG YPDSF_1010 1145747 - 1145406 - | hypothetical protein YPDSF_1011 1149265 - 1145750 - | phage tail protein TERM 1254 1146972 - 1146991 + g 78 -2.2 -5.27023 | gap 1 AGTAACTCCCTTGTT GCTATATCG TCT TGATA-AGC TTTTATTTTTGGCGT TERM 1255 1147086 - 1147096 + g 80 -2.4 -5.46657 | AATGTAGCTTTCCCT GCTG CTG CCGC TTTTTTGTTAGACTC TERM 1256 1148039 - 1148054 + g 76 -7.6 -4.38712 | ATTATCTGCATTCTC TGCCAA ATTG TTGGCA TTTTCTGAAAGTGAG YPDSF_1012 1149885 - 1149574 - | hypothetical protein YPDSF_1013 1150818 - 1149898 - | hypothetical protein TERM 1257 1150862 - 1150849 - R 100 -9.5 -5.71712 | opp_overlap 1150846 1150849 TTGGATATAAAAAAA CCGGC ATAG GCCGG TGGTGTTGGATTGAT TERM 1258 1150849 - 1150862 + r 70 -9.5 -2.78058 | opp_overlap 1150849, overlap 1150846 TTGGATATAAAAAAA CCGGC ATAG GCCGG TGGTGTTGGATTGAT YPDSF_1014 1151291 - 1150884 - | hypothetical protein YPDSF_1015 1151872 - 1151288 - | hypothetical protein YPDSF_1016 1152170 - 1151874 - | hypothetical protein YPDSF_1017 1152481 - 1152227 - | hypothetical protein YPDSF_1018 1153008 - 1152478 - | hypothetical protein TERM 1259 1152764 - 1152785 + g 70 -8 -3.71672 | overlap 1152759 1152780 AAAATGATATCTGAT CTCGGCCA GGGTAA TGGCTGAG TTAGTTTTGCTCGGC TERM 1260 1152993 - 1152980 - G 100 -9.5 -4.66537 | overlap 1152960 TCCTCCAATAGAAAA GGGGC CACA GCCCC CATAGTCATCACCAT YPDSF_1019 1154213 - 1153008 - | hypothetical protein YPDSF_1020 1155000 - 1154227 - | hypothetical protein TERM 1261 1154541 - 1154555 + g 76 -8.5 -4.18018 | TGTCGTCAGCAGCGC CCGGC AATGC GCCGG TTTTCAATGCGGCGG TERM 1262 1155005 - 1155015 + r 74 -6.8 -4.2461 | CGGAATAGCATGCTG TCCC CTT GGGA TTTATTGCTGGGCCT TERM 1263 1155062 - 1155045 - R 87 -6.2 -5.14563 | TGGCCCATTAAAAAA CCCCGC ACGATG GCGAGG CTCAGATTTTGGATA TERM 1264 1155088 - 1155103 + r 70 -7.6 -3.62775 | GGATAACTCAGTTTG TTACCG TTGG CGGTAA TTGTTAAAGCGTAAT YPDSF_1021 1156234 - 1155122 - | hypothetical protein YPDSF_1022 1156876 - 1156235 - | hypothetical protein YPDSF_1023 1157623 - 1156895 - | hypothetical protein TERM 1265 1157310 - 1157328 + g 76 -8 -4.1964 | overlap 1157314 TGATAAATGCTGATA CCTGCGCC ATT GGCGTTGG TTTTCAGGTATTCCA TERM 1266 1157314 - 1157324 + g 70 -8.2 -3.68767 | overlap 1157310 AAATGCTGATACCTG CGCC ATT GGCG TTGGTTTTCAGGTAT YPDSF_1024 1159113 - 1157623 - | hypothetical protein TERM 1267 1159013 - 1159033 + g 78 -2.5 -5.23644 | overlap 1159015 TGCTCTGGAGTCATT TTGAAAGTG ACA CACTTCCCA TTTTTGTCTTTGATT YPDSF_1025 1159572 - 1159123 - | hypothetical protein YPDSF_1026 1160238 - 1159603 - | hypothetical protein TERM 1268 1160265 - 1160289 + r 86 -12.2 -3.15999 | opp_overlap 1160265, overlap 1160252 CCGCTGGTTGATAAA GTCTCAGCCG CTAAT TGGCTGAGAC TTCGATATGTGAAAA TERM 1269 1160289 - 1160265 - R 95 -11.5 -3.85698 | opp_overlap 1160252 1160265 CCGCTGGTTGATAAA GTCTCAGCC GCTAATT GGCTGAGAC TTCGATATGTGAAAA TERM 1270 1160619 - 1160647 + r 93 -9 -4.48483 | AATGCTTTTAGTTGA TTGAGAGCTGTT GTGAA AGTAGCTCTCAA TTTGTCTTTATTATC YPDSF_1027 1161408 - 1160695 - | phage regulatory protein TERM 1271 1161579 - 1161558 - R 100 -8.7 -5.45652 | opp_overlap 1161558 ACTGCCAATAAAAAA GGCCCAGTC GTTA AACTGAGCC TTCATGTTCTTTGTT YPDSF_1028 1162412 - 1161954 - | prophage endopeptidase YPDSF_1029 1162909 - 1162397 - | phage lysozyme TERM 1272 1163274 - 1163255 - R 100 -11.4 -4.43272 | AGCTAAAACGGAAAA GGCCACGC ATAA GCGTAGCC CTGAAAAAGTACCGG YPDSF_1030 1163828 - 1163655 - | hypothetical protein TERM 1273 1163904 - 1163887 - R 100 -9.1 -4.8622 | TCTCTGAAGTAAAAA GGCCCAC CGAA GTGAGCC TTGAAATTAGTTGGT TERM 1274 1163969 - 1163944 - R 76 -9.7 -3.39856 | opp_overlap 1163968, overlap 1163945 CATATAGTTAATGAA TGTCACCCTCA CCAA TGAGGGCGACC ATGCCGAGGACTTGC TERM 1275 1163968 - 1163945 - R 91 -13.2 -2.63432 | overlap 1163944 ATATAGTTAATGAAT GTCACCCTCA CCAA TGAGGGCGAC CATGCCGAGGACTTG TERM 1276 1164194 - 1164176 - R 82 -5.9 -5.04601 | opp_overlap 1164176 TGTAGAAACGAAAAA GCCCCGC GATAT ACGAGGC CTTTTTTAATGGTGT YPDSF_1031 1164851 - 1164288 - | hypothetical protein TERM 1277 1165033 - 1165022 - R 100 -7.2 -5.64274 | opp_overlap 1165029, overlap 1165023 TTACGCATAAAAAAA CCGC AAAC GCGG CTATGCGTTGTTGTG TERM 1278 1165095 - 1165065 - R 71 -8.4 -3.55761 | gap 1 TATCCAGGGTGCAAA TCCCG-ACACCTG ATTTTG CAGGTGTACAGGA AATATAGCCCCGAAT YPDSF_1032 1165511 - 1165122 - | phage antitermination protein YPDSF_1033 1166117 - 1165512 - | hypothetical protein YPDSF_1034 1166637 - 1166191 - | hypothetical protein TERM 1279 1167282 - 1167270 - g 70 -3.3 -4.86773 | CAAAAGCAGGAAAAA CAGTC ATC GGCTG CCGGACGGAAAGGCT YPDSF_1035 1166718 - 1167362 + | methyltransferase YPDSF_1036 1168869 - 1168090 - | transposase/IS protein TERM 1280 1168788 - 1168802 + g 77 -11.4 -3.3506 | overlap 1168801 CTGCCTGTTGTGACA GCGCAG GCG CTGCGC TTATAAGGCTTTCCA YPDSF_1037 1169891 - 1168869 - | transposase for insertion sequence IS100 TERM 1281 1169913 - 1169895 - H 100 -13.2 -4.01078 | AAAAGTGACCATAAA CTCTCCTG AAT CAGGAGAG CAGATTACCCCCTGG TERM 1282 1170828 - 1170815 - g 80 -4.5 -5.20328 | opp_overlap 1170825 1170827 GGGGAAAAAAATAAA GGTAG ATGT CCACC TTCGCGAATTTGGCA YPDSF_1038 1169961 - 1171199 + | hypothetical protein YPDSF_1039 1171672 - 1171226 - | hypothetical protein TERM 1283 1171736 - 1171767 + r 82 -7.9 -4.45693 | overlap 1171737 1171738 CTTACAGATGCAAGT TTTGCCGCCCGAC AGTAGA GTCGGACGGCACG TTTCTCTTTATATTA TERM 1284 1171737 - 1171766 + r 74 -9.2 -3.25789 | overlap 1171736 1171738 TTACAGATGCAAGTT TTGCCGCCCGAC AGTAGA GTCGGACGGCAC GTTTCTCTTTATATT TERM 1285 1171738 - 1171765 + r 86 -12.7 -2.53847 | overlap 1171737 1171736 TACAGATGCAAGTTT TGCCGCCCGAC AGTAGA GTCGGACGGCA CGTTTCTCTTTATAT YPDSF_1040 1172431 - 1171775 - | hypothetical protein YPDSF_1041 1173587 - 1172502 - | lipoprotein YPDSF_1042 1174000 - 1173728 - | hypothetical protein TERM 1286 1174495 - 1174484 - H 71 -3 -5.03145 | CAAGTGTTGAAAAAA TATG CAAT CATA AAATAGCGGCTGAGT TERM 1287 1174515 - 1174499 - H 74 -6.5 -4.55491 | TATGCAATCATAAAA TAGCGGC TGA GTCGCTA AATATAGGGGGTCAA TERM 1288 1175051 - 1175036 - g 70 -4.6 -4.70879 | overlap 1175028 1175038 GGTAAAGGCCAAAAA CTGGCT CCAG AGCCGG TCATCAGTCCGCCGG minC 1174721 - 1175407 + | septum formation inhibitor YPDSF_1044 1175432 - 1176244 + | cell division inhibitor MinD minE 1176248 - 1176517 + | cell division topological specificity factor MinE TERM 1289 1176529 - 1176560 + T 100 -17.5 -3.43117 | opp_overlap 1176532, overlap 1176532 ATGATTTCTTCTCAA TAACGCCCCTGTA TTTATT TACAGGGGCGTTA TTCTCAATTGACTGT TERM 1290 1176532 - 1176557 + T 100 -14.8 -3.84808 | opp_overlap 1176532, overlap 1176529 ATTTCTTCTCAATAA CGCCCCTGTA TTTATT TACAGGGGCG TTATTCTCAATTGAC TERM 1291 1176557 - 1176532 - T 100 -14.8 -3.61517 | opp_overlap 1176532 1176529 ATTTCTTCTCAATAA CGCCCCTGTA TTTATT TACAGGGGCG TTATTCTCAATTGAC TERM 1292 1176706 - 1176693 - T 73 -5.3 -4.61873 | opp_overlap 1176700 1176701, overlap 1176688 1176700 1176701 1176702 GTTCATAAATTAAAA CTGAA AAGT TTCAG CGTGGAATTAATATC TERM 1293 1176731 - 1176702 - T 70 -10.1 -2.54204 | opp_overlap 1176701 1176700 1176723, overlap 1176688 1176693 1176701 1176700 TTAAAACTGAAAAGT TTCAGCGTGGAAT TAAT ATCCCACCCTGAA GGCTGATTAATATCA YPDSF_1046 1177914 - 1176754 - | ribonuclease D TERM 1294 1176940 - 1176960 + g 78 -2.6 -5.24129 | opp_overlap 1176940, overlap 1176942 GACCGATTGAATCAA GGCTTTAA TATCT TTAAAGAC TTTTTTGTACCCCGG TERM 1295 1177980 - 1178016 + r 100 -14.6 -3.767 | gap 1, opp_overlap 1177981 1177983, overlap 1177981 1177982 1177986 1177989 ATAGTTCGATAACAA ACA-CAACAACGCCGGT GATA ACCGGCGTTGTTGATGA TTTAGTGACTCCGTC TERM 1296 1178015 - 1177981 - R 100 -18.1 -4.31433 | gap 1, opp_overlap 1177981 1177980 1177982 1177986 1177989, overlap 1177983 TAGTTCGATAACAAA CA-CAACAACGCCGGT GATA ACCGGCGTTGTTGATG ATTTAGTGACTCCGT TERM 1297 1177981 - 1178015 + r 100 -18.1 -2.85699 | gap 1, opp_overlap 1177981 1177983, overlap 1177980 1177982 1177986 1177989 TAGTTCGATAACAAA CA-CAACAACGCCGGT GATA ACCGGCGTTGTTGATG ATTTAGTGACTCCGT TERM 1298 1177982 - 1178013 + r 100 -17.4 -2.97667 | opp_overlap 1177981 1177983, overlap 1177981 1177980 1177986 1177989 AGTTCGATAACAAAC ACAACAACGCCGGT GATA ACCGGCGTTGTTGA TGATTTAGTGACTCC TERM 1299 1178012 - 1177983 - R 100 -20.9 -3.75817 | opp_overlap 1177982 1177981 1177980 1177986 1177989, overlap 1177981 GTTCGATAACAAACA CAACAACGCCGGT GATA ACCGGCGTTGTTG ATGATTTAGTGACTC TERM 1300 1177986 - 1178009 + r 100 -16.8 -3.34227 | opp_overlap 1177983 1177981, overlap 1177982 1177981 1177980 1177989 CGATAACAAACACAA CAACGCCGGT GATA ACCGGCGTTG TTGATGATTTAGTGA TERM 1301 1177989 - 1178006 + r 100 -12.7 -3.79909 | opp_overlap 1177983 1177981, overlap 1177986 1177982 1177981 1177980 TAACAAACACAACAA CGCCGGT GATA ACCGGCG TTGTTGATGATTTAG YPDSF_1047 1179756 - 1178035 - | long-chain-fatty-acid--CoA ligase TERM 1302 1179616 - 1179601 - G 71 -6.1 -4.29106 | opp_overlap 1179587 GCCCATATTAATAAA TGCGG GTTGGT CCGCA TAACGCAACGCCGCG TERM 1303 1180172 - 1180155 - R 100 -12.7 -4.64844 | TGTAGATATAGAAAA GGCGCTG GACT CAGCGCC TCTGACTGCTGACAA TERM 1304 1180249 - 1180223 - R 84 -10.1 -3.79519 | gap 1, opp_overlap 1180232, overlap 1180224 1180239 AACGGTAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 1305 1180250 - 1180224 - R 72 -10.1 -2.87229 | gap 1, opp_overlap 1180232, overlap 1180223 1180239 ACGGTAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT TERM 1306 1180328 - 1180345 + r 100 -9.1 -4.82901 | gap 1 TTGTCAATAACCTCA GGCGCTGG ACT CC-GCGCC TTTTTGTGGCCCAAA YPDSF_1050 1181801 - 1181103 - | hypothetical protein YPDSF_1051 1183777 - 1181873 - | DEAD box family helicase TERM 1307 1182602 - 1182613 + g 78 -5.8 -4.7497 | opp_overlap 1182602 1182601 CGCTGAGGTGAAAAT CCAG GTGC CTGG TTTTTCCTCAATCAA TERM 1308 1183199 - 1183180 - G 100 -10 -4.82901 | opp_overlap 1183168 TGTCCGCCAGAAAAA GATGGTGG TTTA CCACCACC ACATCAGCATCCATC TERM 1309 1183215 - 1183228 + g 74 -9.5 -3.53012 | ACATCAGCATCCATC GCCCG ACGA CGGGC TTTCACCACAAAACA YPDSF_1052 1183908 - 1184252 + | hypothetical protein TERM 1310 1184337 - 1184364 + T 70 -9.8 -2.52015 | opp_overlap 1184338, overlap 1184336 AAGCCACAAAAACAA AGGAGAGTAGCC GCCA GGCTACCCTCCG CTTACTGCCTCTGGC TERM 1311 1184363 - 1184338 - T 100 -15.5 -4.97405 | opp_overlap 1184337 1184336 AGCCACAAAAACAAA GGAGAGTAGCC GCCA GGCTACCCTCC GCTTACTGCCTCTGG YPDSF_1053 1184713 - 1184384 - | multidrug efflux system protein MdtI YPDSF_1054 1185143 - 1184700 - | integral membrane protein TERM 1312 1185805 - 1185779 - R 100 -11.6 -5.03314 | opp_overlap 1185777 1185783 1185784 1185795, overlap 1185784 GTGATTCTGAAAAAA CAAAACCCCTGC AAT GCAGAGGCTCTG TCTTTGGTGAAAATA TERM 1313 1185800 - 1185784 - R 100 -10.1 -5.42198 | opp_overlap 1185784 1185783 1185777 1185795, overlap 1185779 TCTGAAAAAACAAAA CCCCTGC AAT GCAGAGG CTCTGTCTTTGGTGA YPDSF_1055 1186499 - 1185858 - | keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase TERM 1314 1186687 - 1186722 + r 78 -9.7 -3.42574 | overlap 1186689 1186690 TGCTCTCCCTGGCAG TCACGCGCCATCAGA TTCGCC TCTGGTGGCGCGCTA TTATCGTGCGGTTAG TERM 1315 1186689 - 1186720 + r 95 -12.3 -3.28219 | overlap 1186687 1186690 CTCTCCCTGGCAGTC ACGCGCCATCAGA TTCGCC TCTGGTGGCGCGC TATTATCGTGCGGTT TERM 1316 1186690 - 1186719 + r 100 -15.8 -2.56449 | overlap 1186689 1186687 TCTCCCTGGCAGTCA CGCGCCATCAGA TTCGCC TCTGGTGGCGCG CTATTATCGTGCGGT YPDSF_1056 1188225 - 1186741 - | glucose-6-phosphate 1-dehydrogenase YPDSF_1057 1188422 - 1189447 + | DNA-binding transcriptional regulator HexR YPDSF_1058 1189777 - 1191219 + | pyruvate kinase TERM 1317 1191275 - 1191244 - T 100 -10.8 -4.46757 | overlap 1191249 AAGATAGGCAGAAAA GCAAAGGCCCGCTA TCAC TAGCGGGCCTCAGA CTGCTGACAAACCCC TERM 1318 1191270 - 1191249 - T 100 -15.9 -4.27483 | overlap 1191244 AGGCAGAAAAGCAAA GGCCCGCTA TCAC TAGCGGGCC TCAGACTGCTGACAA TERM 1319 1191359 - 1191333 - T 84 -10.1 -3.82218 | gap 1, opp_overlap 1191342, overlap 1191334 1191349 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 1320 1191360 - 1191334 - T 72 -10.1 -2.88849 | gap 1, opp_overlap 1191342, overlap 1191333 1191349 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT TERM 1321 1191438 - 1191459 + T 100 -15.9 -4.36595 | opp_overlap 1191434 1191433 TTGTCAATAACCTCA GGCCCGCTA TCAC TAGCGGGCC TTTTACCTTTAACTG YPDSF_1059 1192521 - 1191559 - | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase TERM 1322 1192748 - 1192714 - R 100 -15.2 -3.74077 | overlap 1192719 GCTGACAGACTGAAA CTAAACTGCCAGTG CTCAACT CACTGGCAGCTTAG GGATAAACACACCGA TERM 1323 1192743 - 1192719 - R 100 -11.5 -4.09556 | overlap 1192714 CAGACTGAAACTAAA CTGCCAGTG CTCAACT CACTGGCAG CTTAGGGATAAACAC TERM 1324 1192781 - 1192758 - R 73 -8.8 -3.5511 | overlap 1192756 1192760 GCTTAGGGATAAACA CACCGACAGG CTAA CCTGACGGTA TCACTGCTAATCCAG TERM 1325 1192779 - 1192760 - R 74 -9.2 -3.34988 | overlap 1192758 1192756 TTAGGGATAAACACA CCGACAGG CTAA CCTGACGG TATCACTGCTAATCC YPDSF_1060 1194104 - 1192788 - | hypothetical protein TERM 1326 1194012 - 1193992 - G 86 -8.2 -4.60797 | GGGTGATAGATAAAA GGCCGCCA AACAG CGACGGCC AGTGTCATTACAGTC znuA 1195081 - 1194125 - | high-affinity zinc transporter periplasmic component TERM 1327 1195337 - 1195365 + G 70 -8.1 -3.65812 | CCAAGTAGTGGATCT CTGGTTCGTGAGC CTG GCTTACGCATCGG TTATGTTCCGCAAAA TERM 1328 1195467 - 1195451 - g 76 -4.3 -5.00616 | opp_overlap 1195459 CCGGGGGTGAAAAAA GCCGACA TTC TGCCTGC ACTCACACGGGTGCA znuC 1195154 - 1195915 + | high-affinity zinc transporter ATPase TERM 1329 1195969 - 1195982 + G 76 -5.9 -4.61566 | CTGGCAACAGCCGCT GGCCC GCTG GGGTC TTTTGTCGTTTGGCG znuB 1195912 - 1196697 + | high-affinity zinc transporter membrane component TERM 1330 1196755 - 1196697 - T 72 -9.8 -2.85803 | gap 1, opp_overlap 1196701 1196702, overlap 1196749 AAAAGCACGAGGATA GTCAT-CACTTCACGCTGTGGGGTTTA GGCCTA TAACCCCCACAGCGTGAAACGTATTAT TCTTCCCGAGTAATA TERM 1331 1196701 - 1196751 + T 89 -10.6 -3.94877 | gap 1, opp_overlap 1196697 1196749, overlap 1196702 GCACGAGGATAGTCA T-CACTTCACGCTGTGGGGTTTA GGCCTA TAACCCCCACAGCGTGAAACGTA TTATTCTTCCCGAGT TERM 1332 1196702 - 1196749 + T 100 -15.7 -3.56318 | opp_overlap 1196697, overlap 1196701 CACGAGGATAGTCAT CACTTCACGCTGTGGGGTTTA GGCCTA TAACCCCCACAGCGTGAAACG TATTATTCTTCCCGA ruvB 1197756 - 1196752 - | Holliday junction DNA helicase B ruvA 1198598 - 1197918 - | Holliday junction DNA helicase motor protein TERM 1333 1198162 - 1198176 + g 71 -5.6 -4.56597 | opp_overlap 1198164, overlap 1198164 TTCATTTCGACCACT AACCGC TCG GCGGTC TTTTTACCGACACCC TERM 1334 1198164 - 1198174 + g 72 -8.2 -3.90048 | opp_overlap 1198164, overlap 1198162 CATTTCGACCACTAA CCGC TCG GCGG TCTTTTTACCGACAC TERM 1335 1198479 - 1198496 + g 73 -6.3 -4.58663 | gap 1 ACCGTTTGTTTCCAG CAG-CACC AGC GGTGGCTG TTTTTCCAGAATGAT TERM 1336 1198776 - 1198757 - R 100 -12.2 -5.34555 | opp_overlap 1198757, overlap 1198733 TTATAGCATAAAAAA GGCTGGAT GGAT ATCCAGCC TGTGATAACAGTTAA TERM 1337 1198757 - 1198776 + r 83 -12.2 -2.79831 | opp_overlap 1198733 1198757 TTATAGCATAAAAAA GGCTGGAT GGAT ATCCAGCC TGTGATAACAGTTAA ruvC 1199336 - 1198815 - | Holliday junction resolvase YPDSF_1067 1200288 - 1199545 - | hypothetical protein TERM 1338 1200241 - 1200255 + g 73 -5.6 -4.66537 | overlap 1200231 1200243 GCGTTTGGCATCCTG TGCCGC TTT GCGGTG TTTTGTGTTGGCCCA TERM 1339 1200243 - 1200253 + g 72 -8.2 -3.94773 | overlap 1200231 1200241 GTTTGGCATCCTGTG CCGC TTT GCGG TGTTTTGTGTTGGCC ntpA 1200789 - 1200346 - | dATP pyrophosphohydrolase TERM 1340 1200422 - 1200408 - G 73 -11.4 -3.0263 | AGGACTTGGTCAATA CGGCAG CCT CTGCCG CATCCAACCACTGGT aspS 1202585 - 1200789 - | aspartyl-tRNA synthetase TERM 1341 1202499 - 1202486 - G 74 -2.3 -5.16841 | GCATATCAATAAAAA TCAGG CCAC CCAGA TCACGACGACGGTTA YPDSF_1070 1203519 - 1204334 + | hypothetical protein YPDSF_1071 1204514 - 1204909 + | hypothetical protein TERM 1342 1204969 - 1204985 + F 100 -10.8 -4.46072 | GCAACCGTTAGTCTG GGCGGC ATATC GCCGCC TTTATGTTTATTCCC TERM 1343 1205823 - 1205807 - g 70 -2.1 -4.94992 | opp_overlap 1205806, overlap 1205808 GGAAACCCACAAAAA TCGTCTG CAT CAGGCGG GGTTTGAACACGCGG YPDSF_1072 1205100 - 1205903 + | hypothetical protein YPDSF_1073 1205900 - 1206871 + | hypothetical protein TERM 1344 1206901 - 1206877 - T 100 -10 -4.80959 | TAAGCCATAAGAAAA TCCCCCAACT CACCC AGATGGGGGA TACCGTTCGTTATAT YPDSF_1074 1207828 - 1207064 - | copper homeostasis protein CutC TERM 1345 1207655 - 1207638 - G 76 -2.7 -5.06414 | gap 1, overlap 1207641 CTGCTGTAACAAAAA TCA-CCAC CAC GTGGCCGA ACTATCGGATGAACC YPDSF_1075 1208635 - 1208060 - | hypothetical protein YPDSF_1076 1208665 - 1208832 + | hypothetical protein TERM 1346 1210949 - 1210923 - g 72 -8 -3.95674 | AAAACGCTGAAACAA GGTCTGGACACC TTG GGTATTCAAACC GTTGAGCGGATGTAA argS 1209234 - 1210964 + | arginyl-tRNA synthetase TERM 1347 1210990 - 1210977 - T 100 -9.5 -5.07107 | TAAATCGTCAAAAAA GGCCC CTCG GGGCC TTAAAAAACGATTAG TERM 1348 1211160 - 1211148 - T 72 -6.2 -4.2461 | overlap 1211149 AGGGTGATGAATAAA GGGG GTTTT CCCC TCAGAGACATCTTTA YPDSF_1078 1215805 - 1211195 - | hemolysin TERM 1349 1213075 - 1213089 + g 71 -5.7 -4.42238 | overlap 1213065 TAACCAACGCTAACG CGTCA TTGTC TGACG TTTTGGTTCGACTGC YPDSF_1079 1217616 - 1215955 - | hemolysin activator protein TERM 1350 1217397 - 1217408 + g 100 -4.4 -5.74122 | TTGGCAGGCATATTT TCTC TGGG GAGA TTTTTTTCTGTGATG TERM 1351 1217973 - 1217989 + r 71 -9.4 -2.96538 | opp_overlap 1217973 TCAATATGTAAAAAA GCCCGA AATTA TCGGGC TATATAATACATTAT TERM 1352 1217989 - 1217973 - R 100 -9.4 -5.1615 | opp_overlap 1217973 TCAATATGTAAAAAA GCCCGA AATTA TCGGGC TATATAATACATTAT YPDSF_1080 1219607 - 1218072 - | membrane protein TERM 1353 1219500 - 1219488 - G 90 -6.2 -5.28826 | AAATGCCACAAAAAA GGCG TCCGT CGCC ATACCTGCACCAAAT TERM 1354 1219671 - 1219645 - R 71 -8.7 -3.34894 | opp_overlap 1219649, overlap 1219643 1219646 1219649 AATGTGCTGTAAATA CCAACGCCTAC GGTCT GCAGGCGTTGC TCTACCCAATGGGGG TERM 1355 1219670 - 1219646 - R 83 -12.2 -2.60615 | opp_overlap 1219649, overlap 1219645 1219643 1219649 ATGTGCTGTAAATAC CAACGCCTAC GGTCT GCAGGCGTTG CTCTACCCAATGGGG YPDSF_1081 1221484 - 1219874 - | oxidoreductase TERM 1356 1220601 - 1220587 - G 82 -7.1 -4.88736 | TACTATGGACAAAAA CGGCA TCACT TGCCG CAGCGAGCGTATCCA TERM 1357 1220837 - 1220874 + g 79 -5.5 -5.0133 | opp_overlap 1220836, overlap 1220839 TGACAACTGGATAAC CTGCTGTTCAAGCTGGG CAAC CCTAGCTTCAAGGGCTG TTTTTTCAAGGGCTA TERM 1358 1220839 - 1220872 + g 71 -6.7 -4.13561 | opp_overlap 1220836, overlap 1220837 ACAACTGGATAACCT GCTGTTCAAGCTGGG CAAC CCTAGCTTCAAGGGC TGTTTTTTCAAGGGC YPDSF_1082 1222076 - 1221492 - | ribosomal-protein-S5-alanine N-acetyltransferase TERM 1359 1222614 - 1222598 - g 70 -8.7 -3.53012 | opp_overlap 1222587 CGGTTCGGTGCCAAA CCGATGA TTG TCACCGG GATGCTAATGCGAGC YPDSF_1083 1222370 - 1223575 + | multidrug resistance protein MdtH TERM 1360 1223581 - 1223628 + F 79 -10.8 -3.14931 | gap 1, opp_overlap 1223594 CAGCAGCTAACGTTA TGTCCCTTATCAACCGGAGACGT TTT GCCTTTCCGGTTGATAAGC-ACA TTCCTCGCGCATACG TERM 1361 1224099 - 1224087 - g 70 -4.9 -4.62302 | GAATACCTGCAAAAA CATAA TAA TTATG AAAAACAGATCGGTA TERM 1362 1224542 - 1224501 - g 73 -8.7 -3.80625 | GGGTTAGAAGTTAAA CCGGGCCAATTAGTCATCC CATT GACTGACTAACCGGCACAG GTCATTTCACGCTAC YPDSF_1084 1223970 - 1224533 + | hypothetical protein YPDSF_1085 1225547 - 1224987 - | hypothetical protein YPDSF_1086 1226321 - 1225584 - | putative hydrolase TERM 1363 1226490 - 1226474 - R 73 -7.3 -4.16016 | overlap 1226486 GTATCCCTCAATAAA TGCCGAT GAA ATCAGCA AATTGCTATAACTTT TERM 1364 1226710 - 1226728 + r 100 -8.1 -5.80951 | opp_overlap 1226710 1226709 CGCCAAATAATAAAC CCCGACC TTTAT GGTTGGG TTTTTTCTTTTGCAT TERM 1365 1226838 - 1226851 + r 76 -2.5 -5.252 | opp_overlap 1226848 TGTATCAATCACTGT TTTAT ATCA ATAAA TTTTTTATACCAGTA YPDSF_1087 1228068 - 1226956 - | transcriptional regulatory protein YPDSF_1088 1228912 - 1228082 - | hypothetical protein YPDSF_1089 1229112 - 1229453 + | ABC transporter, ATP-binding subunit TERM 1366 1229463 - 1229439 - Tf 93 -9.9 -4.3953 | opp_overlap 1229442, overlap 1229441 1229442 CTGAAGCAGAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCATATGCGCCTAT TERM 1367 1229461 - 1229441 - Tf 100 -12.5 -3.79611 | opp_overlap 1229442, overlap 1229439 1229442 GAAGCAGAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 1368 1229460 - 1229442 - Tf 100 -16 -2.86682 | opp_overlap 1229442, overlap 1229441 1229439 AAGCAGAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 1369 1229442 - 1229460 + TF 100 -16 -4.8048 | opp_overlap 1229442 1229441 1229439 AAGCAGAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC YPDSF_1090 1229999 - 1229541 - | transposase for the IS1541 insertion element TERM 1370 1230112 - 1230130 + GH 100 -16 -4.36914 | opp_overlap 1230112 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 1371 1230130 - 1230112 - gH 100 -16 -3.07307 | opp_overlap 1230112 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA YPDSF_1091 1229999 - 1230904 + | hypothetical protein TERM 1372 1231564 - 1231575 + G 85 -7.2 -4.87665 | TTTATCGGTGCACTG GGCG ATTT CGCC TTTTTCTCGGTCGCC YPDSF_1092 1230901 - 1231767 + | binding-protein-dependent transport system membrane protein YPDSF_1093 1231764 - 1232600 + | binding-protein-dependent transport system membrane protein YPDSF_1094 1232620 - 1233702 + | hypothetical protein TERM 1373 1233790 - 1233818 + F 75 -10.3 -2.87564 | overlap 1233786 TCCTTGGCGGGTACA GTCGCTGTATTGT TCG ACGAAACGGCGAC TGTATCAGCGAATGA YPDSF_1095 1234003 - 1234878 + | hypothetical protein TERM 1374 1234860 - 1234874 + F 74 -10 -3.18452 | TGACTCCCCCGCCAC CGCCAA AAA TTGGCG TTAAATTCACCTAAT TERM 1375 1235021 - 1234984 - f 88 -12.7 -2.62184 | TCGCCCCCTATAGTA CCGCCCCGTTGCACCAC TATA ACGGCGCAACGAAACGG TGAGGTGTCTGAGTG TERM 1376 1235123 - 1235144 + F 100 -6.5 -5.95166 | CAAATTCAAAAATAA GGTTCTGAC GAAA GTCGGGGCC TTTTTTTTGGTTACA YPDSF_1096 1235945 - 1237642 + | putative sulfate transporter YchM TERM 1377 1237686 - 1237663 - T 81 -5.2 -5.1861 | opp_overlap 1237676, overlap 1237664 TTGATTATCAAAAAA GGCAGCTTAG TTAC CTACGCTGCG TGAGGTTATTGACAA TERM 1378 1237685 - 1237664 - T 75 -8.7 -3.70443 | opp_overlap 1237676, overlap 1237663 TGATTATCAAAAAAG GCAGCTTAG TTAC CTACGCTGC GTGAGGTTATTGACA TERM 1379 1237764 - 1237790 + T 72 -10.1 -2.88849 | gap 1, opp_overlap 1237753, overlap 1237759 1237765 ACATCCATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCTCTGCC TERM 1380 1237765 - 1237791 + T 84 -10.1 -3.82218 | gap 1, opp_overlap 1237753, overlap 1237759 1237764 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCTCTGCCT TERM 1381 1237854 - 1237877 + T 100 -11 -5.46657 | overlap 1237845 1237850 TTGTCAGCAGTCTGA GGCAGCTTAG TTGC CTACGCTGCC TTTTTTATTGCCCTA YPDSF_1097 1238973 - 1238119 - | 2-dehydro-3-deoxyphosphooctonate aldolase YPDSF_1098 1239878 - 1239069 - | putative transcriptional regulator YPDSF_1099 1240276 - 1239875 - | hypothetical protein YPDSF_1100 1241170 - 1240340 - | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase prfA 1242252 - 1241170 - | peptide chain release factor 1 TERM 1382 1241896 - 1241877 - G 79 -7.1 -4.60487 | opp_overlap 1241891, overlap 1241879 TATCACCGGCAAAAA TAGCGGC TTCATC GCCGCCA GTCCCCGCGCGGATT hemA 1243601 - 1242285 - | glutamyl-tRNA reductase lolB 1243853 - 1244476 + | outer membrane lipoprotein LolB YPDSF_1105 1245448 - 1244624 - | hypothetical protein YPDSF_1104 1244478 - 1245377 + | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase YPDSF_1106 1245718 - 1246665 + | ribose-phosphate pyrophosphokinase TERM 1383 1246800 - 1246835 + T 80 -9 -3.92577 | opp_overlap 1246805, overlap 1246805 TTGAAGCAGATAAAG AAAAACCCGTTGAAGC CTGT GCGACAACGGGTTTTC TGTTTTTGAAGATTC TERM 1384 1246830 - 1246805 - T 100 -8.9 -5.42975 | opp_overlap 1246800 1246805 GCAGATAAAGAAAAA CCCGTTGAAGC CTGT GCGACAACGGG TTTTCTGTTTTTGAA TERM 1385 1246805 - 1246830 + T 100 -8.9 -4.98672 | opp_overlap 1246805, overlap 1246800 GCAGATAAAGAAAAA CCCGTTGAAGC CTGT GCGACAACGGG TTTTCTGTTTTTGAA YPDSF_1107 1247139 - 1246867 - | hypothetical protein TERM 1386 1247366 - 1247336 - H 93 -12.1 -3.68836 | opp_overlap 1247333 ATATTTAGCCAAGAA GTTGAATGATTCC GAAGG GAAATCATTCAAC TATACAATTATTTTT TERM 1387 1247935 - 1247951 + G 74 -7.3 -4.18018 | opp_overlap 1247935 TCCTGGTGATAAAAG CAAAGTC ACT GGCTTTG TTTTGGGTAAACCCC YPDSF_1108 1247471 - 1248091 + | peptidyl-tRNA hydrolase YPDSF_1109 1248255 - 1249346 + | translation-associated GTPase TERM 1388 1249426 - 1249409 - f 100 -11.3 -4.47485 | opp_overlap 1249409 AAAAATGCTATAAAA TCCACGC AATT GCGTGGA TTTTTGTTTTCATAG TERM 1389 1249409 - 1249426 + F 100 -11.3 -5.50723 | opp_overlap 1249409 AAAAATGCTATAAAA TCCACGC AATT GCGTGGA TTTTTGTTTTCATAG YPDSF_1110 1249559 - 1249957 + | hypothetical protein TERM 1390 1250483 - 1250451 - g 100 -16.5 -3.63744 | opp_overlap 1250456, overlap 1250456 TCTGTCGTTAAAATA CAAAACGCCCGATGA AGT TCATCAGGCGTTTTA AGGCAAAAAAGTGTC TERM 1391 1250478 - 1250456 - g 100 -14.2 -4.89567 | opp_overlap 1250456, overlap 1250451 CGTTAAAATACAAAA CGCCCGATGA AGT TCATCAGGCG TTTTAAGGCAAAAAA TERM 1392 1250456 - 1250478 + G 90 -12 -4.07568 | opp_overlap 1250456 1250451 CGTTAAAATACAAAA CGCCCGATGA AGT TCATCAGGCG TTTTAAGGCAAAAAA YPDSF_1111 1249975 - 1250484 + | integrase core subunit YPDSF_1112 1250930 - 1250532 - | rhodanese-like protein YPDSF_1113 1251768 - 1250938 - | putative esterase YPDSF_1114 1252421 - 1251765 - | hypothetical protein TERM 1393 1253007 - 1253024 + H 100 -7.7 -5.83211 | opp_overlap 1253002 1253007 AAAAAACCGATAAAA TCCACGT GCTT GCGTGGA TTTTTTGTTTTCATA TERM 1394 1253024 - 1253007 - H 79 -7 -4.58242 | opp_overlap 1253007, overlap 1253002 AAAAAACCGATAAAA TCCACG TGCTTG CGTGGA TTTTTTGTTTTCATA YPDSF_1115 1253052 - 1253894 + | hypothetical protein YPDSF_1116 1254797 - 1254102 - | hypothetical protein TERM 1395 1254303 - 1254293 - G 70 -3.2 -4.88736 | CACGACCCATAAAAA CAGA CAC TCCG TATACCACAATACTG TERM 1396 1254374 - 1254360 - G 79 -7.1 -4.73682 | opp_overlap 1254359, overlap 1254371 CGCCAGAAGAGAAAA TGGCG AAATA CGCCA GATTTTACAGAAAAA YPDSF_1117 1255477 - 1254812 - | flavodoxin YPDSF_1118 1256759 - 1255668 - | hypothetical protein TERM 1397 1256942 - 1256913 - H 93 -8.7 -4.46112 | overlap 1256909 1256892 1256915 1256916 TGTCAGTTAAAGAAA TACTTTCCTGACA AAAA TGTCAGGAAAATG TCAGCCTGGTGTTGG TERM 1398 1256940 - 1256915 - H 95 -11.3 -3.83744 | overlap 1256909 1256892 1256913 1256916 TCAGTTAAAGAAATA CTTTCCTGACA AAAA TGTCAGGAAAA TGTCAGCCTGGTGTT TERM 1399 1256939 - 1256916 - H 89 -12.6 -2.89523 | overlap 1256909 1256892 1256915 1256913 CAGTTAAAGAAATAC TTTCCTGACA AAAA TGTCAGGAAA ATGTCAGCCTGGTGT YPDSF_1119 1257024 - 1257347 + | response regulator receiver TERM 1400 1257352 - 1257370 + F 100 -13.2 -4.01078 | CCAGGGGGTAATCTG CTCTCCTG ATT CAGGAGAG TTTATGGTCACTTTT YPDSF_1120 1257374 - 1258396 + | transposase TERM 1401 1258477 - 1258463 - g 77 -11.4 -3.3506 | overlap 1258454 TGGAAAGCCTTATAA GCGCAG CGC CTGCGC TGTCACAACAGGCAG YPDSF_1121 1258396 - 1259175 + | transposase/IS protein TERM 1402 1259582 - 1259571 - g 76 -7.2 -4.3739 | GAGGTGGCGATAAAA CGCC TGCG GGCG AAAATAGATACGCCC YPDSF_1122 1259214 - 1259675 + | transcriptional activator TERM 1403 1260370 - 1260347 - g 70 -4.4 -4.67904 | overlap 1260349 GATGAACTGCAAAAA CTGGCCGTCG CATT CAACGGCGTG CTCGAACGGCAGGAA YPDSF_1123 1259687 - 1261072 + | two-component system sensor protein TERM 1404 1261170 - 1261194 + F 82 -8.6 -4.30104 | opp_overlap 1261175, overlap 1261170 1261173 TTTTGCATACAGGTT TAAGAGGAGG ATCTC CCTCCTCTTC TTCTTTCTTGCTTTA TERM 1405 1261173 - 1261191 + F 91 -10.3 -4.22676 | opp_overlap 1261175, overlap 1261170 1261170 TGCATACAGGTTTAA GAGGAGG ATCTC CCTCCTC TTCTTCTTTCTTGCT YPDSF_1124 1261349 - 1261771 + | decarboxylase YPDSF_1125 1261826 - 1262296 + | hypothetical protein TERM 1406 1263114 - 1263124 + G 70 -3.2 -4.87133 | CGTAGTGGATAAATC TGGC CCG GCTA TTTTGTTTACACACT YPDSF_1126 1262509 - 1263582 + | hypothetical protein TERM 1407 1263617 - 1263590 - f 85 -4 -5.5112 | opp_overlap 1263590 1263587, overlap 1263591 TTCAGTAATAAAAAA TTAGTGGGGTCG TTGA CGGCTCCACTAC TGCTTATATACTCGT TERM 1408 1263616 - 1263591 - f 70 -7.5 -3.89587 | opp_overlap 1263590 1263587, overlap 1263590 TCAGTAATAAAAAAT TAGTGGGGTCG TTGA CGGCTCCACTA CTGCTTATATACTCG TERM 1409 1263703 - 1263672 - f 84 -10.9 -3.63515 | opp_overlap 1263671 1263670 GGCTACGCTCAACAA CCCCAGGTACTTA TTTATG TAAGCGCCTGGGG ACTTACTTCGTTGCC YPDSF_1127 1264373 - 1265278 + | hypothetical protein TERM 1410 1266047 - 1266031 - g 84 -2.2 -5.59357 | overlap 1266042 ATGAGATCAAAAAAA GCTATC GAAAA GATCGC ACACAATCATAAAGC YPDSF_1128 1265284 - 1266216 + | hypothetical protein YPDSF_1129 1266203 - 1267153 + | hypothetical protein TERM 1411 1267147 - 1267165 + F 70 -9.6 -2.78695 | opp_overlap 1267146 1267145, overlap 1267146 CATGAGTCCAAAACC CCGCTAAT ATA GTTAGCGG ATTACTTTATCTCAA TERM 1412 1267430 - 1267459 + F 87 -8.5 -4.57353 | gap 1, opp_overlap 1267430 AACTTAGTGACTCAA GCCGGGAGTGGCGG TCT TC-TCACACCCGGC TTTTATCTAATAGCC YPDSF_1130 1267494 - 1268174 + | dehydrogenase YPDSF_1131 1268279 - 1268938 + | hypothetical protein YPDSF_1132 1269711 - 1269073 - | hypothetical protein YPDSF_1133 1272069 - 1269958 - | hypothetical protein YPDSF_1134 1272647 - 1274809 + | hypothetical protein TERM 1413 1274881 - 1274860 - T 84 -10.1 -3.74693 | TGCCACCGTATTAAA GGTGATCGC TCAG GCGGTCACC GAACTCGATAATAAA YPDSF_1135 1276063 - 1274855 - | transposase for the IS285 insertion element YPDSF_1136 1276196 - 1277914 + | hypothetical protein TERM 1414 1277951 - 1277973 + F 77 -6.3 -4.65933 | TGGCAATATTGAGGA GCAGGCAAT TAAAT GTTGTCTGC TTTCTTTTAAAGATG YPDSF_1137 1278084 - 1278548 + | hypothetical protein YPDSF_1138 1279896 - 1278709 - | glycosyl transferase YPDSF_1139 1280477 - 1279893 - | hypothetical protein TERM 1415 1279945 - 1279933 - G 73 -5.5 -4.63486 | ACTGCCGCAATAAAA CGCTC ACA AAGCG TCAGTAATGCTGGGT YPDSF_1140 1281628 - 1280474 - | glycosyl transferase YPDSF_1141 1282539 - 1281628 - | dehydrogenase TERM 1416 1282550 - 1282531 - G 73 -9.2 -3.727 | GTCATGACAGGCAAA GCGGCGCA TAAA TGCCCCGC CAATAAACCCCGATG YPDSF_1142 1284010 - 1282724 - | coenzyme synthetase YPDSF_1143 1284813 - 1284007 - | hypothetical protein YPDSF_1144 1285822 - 1284806 - | dehydrogenase YPDSF_1145 1286366 - 1285836 - | 3-oxoacyl-(acyl-carrier-protein) synthase III YPDSF_1146 1286844 - 1286335 - | hypothetical protein TERM 1417 1287664 - 1287699 + H 70 -7.7 -3.70773 | gap 1 GAAATGGTGAGGCCT CAGCCA-TGGGATAAA AATCA TTTATCCCGTTGGCCG TTGTTACATGTAGCG TERM 1418 1289382 - 1289354 - g 76 -5.3 -4.89477 | CCCGTAAGAATAAAA GATTTGGATTACG AGC CGGAACCGAAATC ACCCATCAAGCAGAC YPDSF_1147 1287877 - 1289481 + | hypothetical protein YPDSF_1148 1290231 - 1289659 - | hypothetical protein YPDSF_1149 1291601 - 1290231 - | N-formimino-L-glutamate deiminase YPDSF_1150 1291749 - 1292516 + | GntR family transcriptional regulatory protein TERM 1419 1292565 - 1292587 + F 70 -7.1 -3.9009 | TTACGCAATTGTGAA TTCGCTATC TTGCT GATAGTGAA TTTATAGGCTAGGTT YPDSF_1151 1292720 - 1293940 + | imidazolonepropionase TERM 1420 1294009 - 1294027 + F 100 -13.2 -4.01078 | CCAGGGGGTAATCTG CTCTCCTG ATT CAGGAGAG TTTATGGTCACTTTT YPDSF_1152 1294031 - 1295053 + | transposase TERM 1421 1295134 - 1295120 - g 77 -11.4 -3.3506 | overlap 1295111 TGGAAAGCCTTATAA GCGCAG CGC CTGCGC TGTCACAACAGGCAG YPDSF_1153 1295053 - 1295832 + | transposase/IS protein YPDSF_1154 1295848 - 1296702 + | N-formylglutamate amidohydrolase TERM 1422 1296789 - 1296768 - T 84 -10.1 -3.74693 | TGCCACCGTATTAAA GGTGATCGC TCAG GCGGTCACC GAACTCGATAATAAA YPDSF_1155 1297971 - 1296763 - | transposase for the IS285 insertion element TERM 1423 1298241 - 1298273 + r 70 -5.6 -4.3207 | gap 1, opp_overlap 1298248, overlap 1298242 1298248 GGTTTACAGCTCACA G-TAAAAAGACGGGG TTTC CCCCGCCTTTCTATC TTTCTATCTTTCTAT TERM 1424 1298242 - 1298271 + r 81 -9.3 -3.74227 | opp_overlap 1298248, overlap 1298241 1298248 GTTTACAGCTCACAG TAAAAAGACGGGG TTTC CCCCGCCTTTCTA TCTTTCTATCTTTCT TERM 1425 1298248 - 1298265 + r 82 -8.3 -4.3207 | opp_overlap 1298248, overlap 1298242 1298241 AGCTCACAGTAAAAA GACGGGG TTTC CCCCGCC TTTCTATCTTTCTAT TERM 1426 1298265 - 1298248 - R 100 -10.5 -4.80882 | opp_overlap 1298248 1298242 1298241 AGCTCACAGTAAAAA GACGGGG TTTC CCCCGCC TTTCTATCTTTCTAT TERM 1427 1298459 - 1298441 - R 71 -4.6 -4.58395 | TCTACTGCTTAAAAA CGGTAA GTCAAGT TTACCG CAACAACATCATCCG YPDSF_1156 1299516 - 1298434 - | hypothetical protein YPDSF_1157 1301244 - 1300252 - | succinylglutamate desuccinylase YPDSF_1158 1302648 - 1301305 - | succinylarginine dihydrolase TERM 1428 1302460 - 1302471 + g 71 -7.2 -4.07877 | CGGCCGCTCCTGAGG GGGG AGAA CCCC TTGTTTGTAGCCTAA TERM 1429 1302538 - 1302514 - G 83 -12.9 -3.63515 | opp_overlap 1302501 TTTCATCTTCAATAA CCCTTGTTTGG CTG CCAAACGAGGG TTGGAAGTACGATTT YPDSF_1159 1304189 - 1302672 - | succinylglutamic semialdehyde dehydrogenase TERM 1430 1303776 - 1303786 + g 70 -8.2 -3.70902 | CACTGACATGCTGTC CCCC ATT GGGG TTTGGCTATGGCCGG TERM 1431 1304015 - 1304002 - G 80 -9.5 -4.09685 | GCCCATGCCGGAAAA GCCGC TCTT GCGGC ATGGCAGGCCAGAGT YPDSF_1160 1305238 - 1304186 - | arginine succinyltransferase TERM 1432 1305267 - 1305279 + r 74 -6.3 -4.57073 | opp_overlap 1305266 1305267, overlap 1305255 GCCTACGGCATAAAC GTTAC GAC GTAAC TTTTTGACAAACCTG YPDSF_1161 1306608 - 1305268 - | bifunctional succinylornithine transaminase/acetylornithine transaminase YPDSF_1162 1308570 - 1307149 - | GntR family regulatory protein TERM 1433 1307363 - 1307401 + g 71 -5.3 -4.57837 | opp_overlap 1307372 1307374, overlap 1307371 1307372 1307374 GGCTCCAATTCTAAC CATAAGAAATAGCCGCC AGCGG GGTGGCTGATTTTGATG TTTTTGGGGAAGTGT YPDSF_1163 1308880 - 1310661 + | nitrate/nitrite sensor protein NarX TERM 1434 1311159 - 1311173 + F 75 -8.5 -3.74693 | TTATTTATCGTTAAC CGGGC CTAAT GCCCG TTTAATACAGTAAAG YPDSF_1164 1311346 - 1312287 + | calcium/sodium:proton antiporter TERM 1435 1312331 - 1312307 - T 100 -16.5 -3.92324 | opp_overlap 1312307 CGTCTGAATAGCAAA GGGCAAGCGCT GTT AACGCTTGCCC TTTTTTGTGTATTCT TERM 1436 1312307 - 1312331 + T 100 -14.3 -5.48787 | opp_overlap 1312307 CGTCTGAATAGCAAA GGGCAAGCGCT GTT AACGCTTGCCC TTTTTTGTGTATTCT YPDSF_1165 1313178 - 1312390 - | hypothetical protein YPDSF_1166 1313522 - 1313238 - | hypothetical protein TERM 1437 1313471 - 1313481 + g 78 -4 -5.07652 | AACGAGTCGCTTGAG TCAA TCT TTGA TTTTGTTTTAACAGC YPDSF_1167 1314665 - 1313955 - | acetyltransferase YPDSF_1168 1315654 - 1315187 - | haemin storage system, HmsS protein TERM 1438 1315504 - 1315479 - G 77 -10.5 -3.54459 | GCAATCGTCGTCAAA CCGCTGAGAAT ATAA ATCCTCAACGG TATCGGCCCCATATG YPDSF_1169 1317024 - 1315651 - | N-glycosyltransferase PgaC YPDSF_1170 1318996 - 1316975 - | haemin storage system, HmsF protein TERM 1439 1318058 - 1318042 - GR 70 -8 -3.58177 | opp_overlap 1318041 1318042 GATAATCCAAATCAA CATGCG CCACC CGCATG ATATTTTTTTCCTGC TERM 1440 1318342 - 1318354 + gr 76 -3.4 -5.09259 | GCTTAAAGGCTTCAA CAGT TTCAT ACTG TTTTGTTTTGGGATC YPDSF_1171 1321477 - 1319009 - | outer membrane protein PgaA TERM 1441 1319441 - 1319427 - G 85 -7.8 -4.84359 | opp_overlap 1319426 1319434 TTACCGTCAGAAAAA CGCGAC GGC GTCACG CTAAGTTCAGCATCA YPDSF_1172 1323363 - 1322146 - | peptidase TERM 1442 1323009 - 1323033 + g 80 -2.8 -5.32882 | gap 1, overlap 1323009 1323010 TAAAGACCGCTTCCA C-TGGTGGGCC AATA GGCCGATCACG TTTTTTATAATGATG YPDSF_1173 1324391 - 1323504 - | tellurite resistance protein TehB TERM 1443 1323736 - 1323763 + g 76 -8.6 -4.1523 | CCGGGTAAAGTACAC TCCTGCATATTA CTGA TAATATGTGGGA TTCTTTCTGGTTGCA YPDSF_1174 1324878 - 1324564 - | cytochrome YPDSF_1175 1325405 - 1324875 - | thioredoxin YPDSF_1176 1326075 - 1325362 - | ABC transporter, ATP-binding protein YPDSF_1177 1327242 - 1326079 - | membrane protein TERM 1444 1326155 - 1326138 - G 70 -9.1 -3.61398 | GTCGGGTGGGAACAA TCGCCGC CACA GCGGCAA CAAACAACGAAAGCA TERM 1445 1326333 - 1326347 + g 70 -10 -3.33744 | overlap 1326338 GGATAATGTCACGCC CACTGG CAC CCAGTG CTTTTTGCAACGCAA TERM 1446 1326338 - 1326348 + g 76 -6.8 -4.56597 | overlap 1326333 ATGTCACGCCCACTG GCAC CCA GTGC TTTTTGCAACGCAAA TERM 1447 1326495 - 1326477 - G 70 -8.8 -3.62046 | opp_overlap 1326477 1326474, overlap 1326478 TTATCTTGTCAAGAA CCTGCCCC TCA GAGGCAGA TACTTTGCGAATTGG YPDSF_1178 1328524 - 1327232 - | membrane protein YPDSF_1179 1329936 - 1328527 - | membrane protein TERM 1448 1329565 - 1329550 - G 73 -9 -3.69333 | TATAACCCAGCCAAA TGCCAC CACG GTGGCA GCCAGATTGAGCAAT YPDSF_1180 1330748 - 1330221 - | hypothetical protein TERM 1449 1331966 - 1331985 + r 79 -7.8 -4.26461 | AAAGTAGGCATCCTG CACCGCCA TCAT TGCCGGTG TTATTTTCCCTTGCT TERM 1450 1332605 - 1332620 + r 77 -4.6 -5.00616 | ATTTCGCCAAAGGCC GCCTCC ATCT GGAAGC TTTTTTGCGCGGAGA TERM 1451 1332994 - 1332979 - R 71 -3.2 -5.00884 | opp_overlap 1332979 ATTTTTTTCAAAAAA TGCGTA CTGA TGCGCA ATTTACCCCACCAAT TERM 1452 1333175 - 1333207 + r 91 -12.8 -2.88887 | gap 1, opp_overlap 1333175, overlap 1333171 1333178 GCCAGAAAGAAAAAA CTGGCAGTG-GCTGC TTTC GCAACACACTGCCAG TCACTTTTATTTCAA TERM 1453 1333207 - 1333175 - R 100 -15 -5.72622 | gap 1, opp_overlap 1333175 1333171 1333178 GCCAGAAAGAAAAAA CTGGCAGTG-GCTGC TTTC GCAACACACTGCCAG TCACTTTTATTTCAA TERM 1454 1333252 - 1333242 - R 70 -2.6 -5.07567 | TTATATTTCAAAAAA TTAA ATT TTAA CAGCAACTTACTTGC TERM 1455 1333357 - 1333331 - R 84 -10.1 -3.82218 | gap 1, opp_overlap 1333340, overlap 1333332 1333347 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 1456 1333358 - 1333332 - R 72 -10.1 -2.88849 | gap 1, opp_overlap 1333340, overlap 1333331 1333347 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT TERM 1457 1333433 - 1333453 + r 84 -5.4 -5.25803 | overlap 1333434 1333449 ACTTTGTCAATAACC TCCAGCAA CTTAC TTGCTGGC TTTTTTATCCAGATT TERM 1458 1333434 - 1333452 + r 78 -8.9 -3.74397 | overlap 1333433 1333449 CTTTGTCAATAACCT CCAGCAA CTTAC TTGCTGG CTTTTTTATCCAGAT YPDSF_1183 1335082 - 1333442 - | membrane protein TERM 1459 1333569 - 1333582 + g 72 -8.1 -3.81146 | AAACCGAATTTCAGC GCACG TAAC CGTGC TTCTTCATTCACCCG TERM 1460 1334249 - 1334262 + g 79 -8.1 -4.30416 | TGTAATCACGTCTAG CGCCA GTAA TGGCG TTTTACCTTGCTCCT YPDSF_1184 1336200 - 1335193 - | glutaminase YPDSF_1185 1336858 - 1336652 - | hydroxypyruvate isomerase TERM 1461 1337761 - 1337794 + G 70 -4.7 -4.7373 | GGACAGAGATGATCT GTTAGTGGTAACCAA CGAC TTTGTTATTGCTAAC TTTTTGATCGAATCC YPDSF_1186 1337411 - 1338181 + | DeoR family transcriptional regulator TERM 1462 1338496 - 1338462 - f 73 -3.7 -4.96845 | ATAAAAATAAATAAA TCTTATTCCATGGGT TAGAT ACATATGAAATAAGA TAAAATGCAATATAA TERM 1463 1339112 - 1339124 + G 73 -2.7 -4.93365 | GGTTTATCTGGTTTG TGGAA TTT TTTCA TTTTTCATTCTCCGG YPDSF_1187 1338903 - 1340432 + | L-asparagine permease YPDSF_1188 1341788 - 1340628 - | aminotransferase TERM 1464 1342511 - 1342521 + G 79 -5.4 -4.98255 | CCACTGTGCAATATT TGGT GCA ACCA TTTTTATGGTTCAGC YPDSF_1189 1342140 - 1342739 + | Na(+)-translocating NADH-quinone reductase subunit E YPDSF_1190 1344006 - 1343044 - | LysR family transcriptional regulator TERM 1465 1343465 - 1343483 + g 75 -10.3 -3.4582 | opp_overlap 1343465, overlap 1343463 GCCTGCCGTAACGCA CTGTCGG CGGTA CCGACAG TATTTGCTAACGTCG TERM 1466 1343483 - 1343465 - G 70 -11 -2.52464 | opp_overlap 1343463 1343465 GCCTGCCGTAACGCA CTGTCGGC GGT ACCGACAG TATTTGCTAACGTCG YPDSF_1191 1344118 - 1344987 + | dicarboxylic acid hydrolase TERM 1467 1345025 - 1344999 - f 73 -2.5 -5.16681 | gap 2, overlap 1345002 TTAAAAATAACAAAA TAACT--TGTGAG GTG CTCACAAGAGTTA AAAAGCCAGTCTGTA TERM 1468 1345020 - 1345002 - f 100 -11.8 -4.59946 | overlap 1344999 AAAATAACAAAATAA CTTGTGAG GTG CTCACAAG AGTTAAAAAGCCAGT TERM 1469 1345555 - 1345596 + G 71 -5.7 -4.33274 | opp_overlap 1345553, overlap 1345554 TACTATCAGAGGAGT GGGCGTGGCGCGCATTATT CTGG ATTGGTGTGCTTCCCGCCC TTTTAGTACTCTACA YPDSF_1192 1345053 - 1346282 + | sugar transporter YPDSF_1193 1346502 - 1347062 + | hypothetical protein TERM 1470 1347311 - 1347333 + G 74 -2 -5.10208 | overlap 1347313 GGGACATTTCTCGTT TATTCCGC AAGGCGA GTGGAATG TTTTTATTCCCATTG YPDSF_1194 1347087 - 1347560 + | lipoprotein TERM 1471 1347564 - 1347576 + T 71 -3.3 -5.03145 | overlap 1347565 GATAGCCAATAATTT TGCTC TTG GGGCG TTTTTTAACCGATTG YPDSF_1195 1348519 - 1347635 - | LysR family transcriptional regulator TERM 1472 1347692 - 1347670 - G 100 -16.3 -3.03635 | CAAAGTTTCTTAATA CCGGCGAGG TATCC CCTCGCCGG TACGCCAACGCGAGC TERM 1473 1348573 - 1348539 - H 78 -9.4 -3.61541 | overlap 1348537 AAAAGCAATTAAACA CACCGGTATCATATAT TGG ATAAATGATAACGGCG ACCATAGACTAAGCG TERM 1474 1349413 - 1349437 + G 80 -13.6 -3.01416 | gap 1, overlap 1349436 CTGTTGCACGTCAGG CCCGC-CGGGT ACTT ACCCGAGCGGG TATCTCTGCCTGATA YPDSF_1196 1348608 - 1349450 + | citrate lyase beta chain YPDSF_1197 1349515 - 1350042 + | transcription regulatory protein YPDSF_1198 1350065 - 1351387 + | 4-hydroxybutyrate coenzyme A transferase TERM 1475 1352569 - 1352547 - gf 70 -7.8 -3.71265 | opp_overlap 1352547 AAGATATTAGTGAAA TACTTTTTGC GGC GCAAAACGTA TTACGTGGTTACTCT YPDSF_1199 1352213 - 1352845 + | two-component response regulator TERM 1476 1352921 - 1352945 + G 73 -12.2 -2.52491 | overlap 1352920 GCGTACCGTACTCTA CTGCCTGCTA CTGAT TAGCGGGCAG CTTCATGCGTCTCTA TERM 1477 1353862 - 1353877 + G 73 -3.2 -4.99638 | TCCGTGACCGCCGGA CCGG AGAAATGG CCGG TTTTTCTGTCGATCT YPDSF_1200 1352820 - 1356821 + | signal transduction histidine kinase TERM 1478 1356851 - 1356867 + F 100 -5.8 -6.23209 | opp_overlap 1356851 TTCCCCTATTAAAAG CGCCAG TCTTC TTGGCG TTTTTTTTTGATTCA YPDSF_1201 1357202 - 1357732 + | fimbrial protein YPDSF_1202 1357825 - 1358469 + | pili assembly chaperone TERM 1479 1359241 - 1359267 + G 70 -2.9 -4.87273 | GGCAGTGAAATTACG CTGGGTGAAAC CTTCA GTTCCGGCCAG TTTTTCTCCAGTCTT TERM 1480 1360855 - 1360844 - g 73 -5.8 -4.52781 | TAATCACAATTAAAA TGCC CGAT GGCA GCCAATTGCCTATGG YPDSF_1203 1358518 - 1361109 + | fimbrial usher protein YPDSF_1204 1361125 - 1362474 + | hypothetical protein TERM 1481 1362964 - 1362950 - g 76 -5.8 -4.65895 | opp_overlap 1362949 1362952 GTTTTCACTTAAAAA TATTGA TAA TCAATA CGTTATAATGAGACT YPDSF_1205 1362471 - 1362983 + | pili assembly chaperone TERM 1482 1364227 - 1364248 + G 77 -10.1 -3.74693 | TTTATTATCGAGTTC GGTGACCGC CTGA GCGATCACC TTTAATACGGTGGCA YPDSF_1206 1363045 - 1364253 + | transposase for the IS285 insertion element YPDSF_1207 1364277 - 1364534 + | pili assembly chaperone TERM 1483 1365921 - 1365909 - g 71 -5.5 -4.56597 | opp_overlap 1365909, overlap 1365911 GCCGCGGGGCAAAAA TGCGA ATG CCGCA TATCGTCCCCCTCTC YPDSF_1208 1365074 - 1366336 + | integrase TERM 1484 1366395 - 1366367 - T 74 -10.3 -2.72829 | opp_overlap 1366372, overlap 1366366 1366369 CACACTCTGGCAAAT TACCACCACCTCC ACA GGAGGTGGTTCTA TATAGACTTTTATCA TERM 1485 1366390 - 1366369 - T 73 -10.1 -2.90813 | opp_overlap 1366372, overlap 1366367 1366366 CACTCTGGCAAATTA CCACCACCT CCAC AGGAGGTGG TTCTATATAGACTTT TERM 1486 1366372 - 1366390 + T 100 -14.6 -3.60814 | opp_overlap 1366369 1366367 1366366 TCTGGCAAATTACCA CCACCTCC ACA GGAGGTGG TTCTATATAGACTTT YPDSF_1209 1367834 - 1366530 - | salicylate synthase Irp9 YPDSF_1210 1369250 - 1367862 - | signal transducer TERM 1487 1368751 - 1368725 - GR 71 -8.8 -3.25823 | gap 1 CGCTGGCGATATCAA TGGTGG-AGGC GACCGT GCCTGCCACCA TAAACAGAACAAATA YPDSF_1211 1370937 - 1369135 - | inner membrane ABC-transporter YbtQ TERM 1488 1370319 - 1370351 + gr 75 -8.5 -3.86346 | gap 1, overlap 1370319 1370322 CAACGATATCGCCGC T-CAGACGCTGGTG CGCTTC CCCCAGCGTCTGCA TTTGTCGCCGCATCG TERM 1489 1370319 - 1370350 + gr 73 -10.1 -2.91593 | overlap 1370319 1370322 CAACGATATCGCCGC TCAGACGCTGGTG CGCTTC CCCCAGCGTCTGC ATTTGTCGCCGCATC TERM 1490 1370322 - 1370347 + gr 74 -10.4 -2.70354 | overlap 1370319 1370319 CGATATCGCCGCTCA GACGCTGGTG CGCTTC CCCCAGCGTC TGCATTTGTCGCCGC TERM 1491 1370862 - 1370827 - GR 100 -13.4 -3.14881 | gap 1 GAATGCCGCCAGCAA CAGCGCCAGCATACTGC GTC GCAGCATCCTGGC-CTG ACTGCCAACGCTGGA YPDSF_1212 1372636 - 1370924 - | lipoprotein inner membrane ABC-transporter TERM 1492 1372601 - 1372591 - G 74 -4.6 -4.85599 | TCCACGCCAGAAAAA GGAG CGC CCCC AGGCTGGTTAATGCC YPDSF_1213 1372893 - 1373852 + | transcriptional regulator YbtA TERM 1493 1373885 - 1373915 + F 100 -21.3 -3.93658 | opp_overlap 1373889 TAAACTCCTCCCTGA CAGAGGCCCGGAT ACCCC ATCCGGGCCTCTG TTCTTTCCGCCTGTT TERM 1494 1373911 - 1373889 - f 100 -15.6 -2.87132 | opp_overlap 1373885 CTCCTCCCTGACAGA GGCCCGGATA CCC CATCCGGGCC TCTGTTCTTTCCGCC TERM 1495 1373967 - 1373936 - f 100 -15.2 -3.14132 | opp_overlap 1373927, overlap 1373943 1373957 TCCGCCTGTTACCAA CCCGAAACGGGCAT AAAT AAACCCGTTTCGGG TAGCATCCAATTGTT TERM 1496 1373967 - 1373957 - f 87 -8.2 -4.55697 | opp_overlap 1373927, overlap 1373943 1373936 ACGGGCATAAATAAA CCCG TTT CGGG TAGCATCCAATTGTT TERM 1497 1375946 - 1375966 + G 70 -8.2 -3.77241 | overlap 1375958 TTGTTGCGGTTCTGG CCGTCCTG CTGGC CGGGGCGG TTTACGTTCCGGTTT TERM 1498 1375958 - 1375978 + G 70 -8.2 -3.6682 | overlap 1375946 TGGCCGTCCTGCTGG CCGGGGCG GTTTA CGTTCCGG TTTCGCTGGATCAGC TERM 1499 1376746 - 1376728 - g 71 -10.2 -3.14132 | CGGGTGGTGGATGAA CAGGGCCG GGA CTGCCCTG ACTGGGTGCCGGGTG TERM 1500 1378304 - 1378276 - g 76 -6 -4.70659 | gap 1, opp_overlap 1378278 1378279, overlap 1378278 1378279 GGCGACATTGAAAAA CAG-GTTGCCGCC CTCT GGCAGCAACTCTT ATCAACTGGCAATGT TERM 1501 1378301 - 1378278 - g 77 -8.8 -3.96999 | opp_overlap 1378278 1378279, overlap 1378276 1378279 CGACATTGAAAAACA GGTTGCCGCC CTCT GGCAGCAACT CTTATCAACTGGCAA TERM 1502 1378300 - 1378279 - g 76 -12.3 -2.97476 | opp_overlap 1378278 1378279, overlap 1378278 1378276 GACATTGAAAAACAG GTTGCCGCC CTCT GGCAGCAAC TCTTATCAACTGGCA TERM 1503 1378279 - 1378300 + G 70 -10.1 -3.23393 | opp_overlap 1378279 1378278 1378276, overlap 1378278 GACATTGAAAAACAG GTTGCCGCC CTCT GGCAGCAAC TCTTATCAACTGGCA TERM 1504 1379213 - 1379197 - g 87 -7.2 -5.0133 | opp_overlap 1379198 1379201, overlap 1379198 CATCGGCTGAAAAAA CGGGCG GCTGA CGCCCA TCTCACCCCGTCGGC TERM 1505 1379221 - 1379254 + G 74 -9.5 -3.60525 | overlap 1379201 1379198 GACGCCCATCTCACC CCGTCGGCCGTACTG TTGT CGGTGTGGTCAACGG TTCTCTCTGCATGGA TERM 1506 1379779 - 1379762 - g 70 -8.3 -3.78775 | TGGCCGAGGATGAAA GCGGCTG GCAA CTGCCGC TCGCCGCGCTGGTGC TERM 1507 1379850 - 1379808 - g 75 -10.5 -3.34398 | gap 1, overlap 1379806 GCCTCCCGTTAAACA CGCAGGGCA-ATGCGCAGAG CGCT CACCGCGCGTATGCCCTGAG CACTCTCAGCCACAC YPDSF_1214 1374043 - 1380150 + | yersiniabactin biosynthetic protein TERM 1508 1380173 - 1380203 + F 78 -10.5 -3.33711 | gap 1, overlap 1380168 CAAACTGATTTTCCC CGGAACGCCATCGC GAAC GC-ATGGCGTTCCA TTGACTTTGTGAATC TERM 1509 1381162 - 1381122 - g 78 -12.5 -2.93073 | overlap 1381130 1381134 CGCGGTCAACAACGA CGGCAACAGAAAGGTCGGC TAT ACCGCCCCTTCCGTCGCAG GGCAACAGGCAGTCA TERM 1510 1381678 - 1381637 - g 85 -7.9 -4.84761 | gap 1, opp_overlap 1381644 1381645, overlap 1381640 1381641 ATAGCGGCAGAAAAA GTACCGCGCTGCTGCTCAGC GCC GCC-AGCGACAGCGCGTTGC GGCGGCTGGCGACGG TERM 1511 1381674 - 1381641 - g 73 -11.7 -2.58667 | gap 1, opp_overlap 1381644 1381645, overlap 1381640 1381637 CGGCAGAAAAAGTAC CGCGCTGCTGCTCAGC GCC GCC-AGCGACAGCGCG TTGCGGCGGCTGGCG TERM 1512 1381834 - 1381808 - g 86 -13.6 -3.64682 | CATTAAACCGTGAAA CCGCCGAGGCGC TCA GCGCCTGGGCCG GTGAGAAATCGGGGG TERM 1513 1382659 - 1382671 + G 74 -4.7 -4.84359 | CAGGTGGCGCATCAG CTCGG CGC CCGCG TTTTTCTGGAGATGG TERM 1514 1385008 - 1384978 - g 73 -3.2 -4.96848 | gap 1, overlap 1384979 1384980 TGGCTCAGAGAAAAA GGGGCGCGACGCA TCGCCC TGC-TGGCGCCGC GCGTGGATGAGTCAT TERM 1515 1385045 - 1385062 + G 70 -11.3 -2.67747 | overlap 1385044 GCGACGTGGAGGGCG GGCAGAC GCGC GTCTGCC GTTGTGATGTGGGCG TERM 1516 1385196 - 1385239 + G 80 -13.2 -3.02144 | gap 1 GCTTGATGACCACCA GCTGGC-TGCCGTTTTCGC GGTAAAA GCGCAGGCGGCAAGCCAGC TGTTGCAAACCCTGC TERM 1517 1385473 - 1385453 - g 79 -11.1 -3.55444 | overlap 1385454 CGGCCACGCCGGAAA TGCTGGCGA CGC TCGCCAGCC GAGGTATGGGCGCGT TERM 1518 1385472 - 1385454 - g 82 -14.6 -2.73124 | overlap 1385453 GGCCACGCCGGAAAT GCTGGCGA CGC TCGCCAGC CGAGGTATGGGCGCG TERM 1519 1385636 - 1385626 - g 70 -2.4 -4.9725 | overlap 1385612 AGCGCCACAGAAAAA GCCG CAA CGCC GGTCATTCCTCCTGC TERM 1520 1386267 - 1386253 - g 79 -11.4 -3.61398 | CTTTCCCCGGAAGAA CAGCGC ATC GCGCTG GAAAAACGGCGGCAT TERM 1521 1389446 - 1389426 - g 71 -7.5 -4.07885 | overlap 1389427 TATGGTGTCGCAAAA CCTGACGCT GCA AGCGGCAGA AACGTGGCTCGACAA YPDSF_1215 1380238 - 1389729 + | yersiniabactin biosynthetic protein TERM 1522 1390224 - 1390234 + G 71 -5.4 -4.48713 | CGACAGTTGCTCTAC TCCA CTC TGGA TTTGTTGTTGCTGGC YPDSF_1216 1389726 - 1390826 + | yersiniabactin biosynthetic protein YbtU YPDSF_1217 1390838 - 1391626 + | yersiniabactin biosynthetic protein YbtT TERM 1523 1392490 - 1392472 - g 71 -10.3 -3.04461 | opp_overlap 1392483, overlap 1392474 CAGGGAGTGGGAAGA CAGCGAC CTTTC GTCGCTG CGCGTCATTCAGGCA TERM 1524 1392565 - 1392575 + G 71 -6.8 -4.2349 | overlap 1392572 CACCTTTGACTGTAC CCTG CAA CAGG TTTTCGGTATGGCGG TERM 1525 1393185 - 1393160 - g 100 -6.7 -5.46276 | opp_overlap 1393160, overlap 1393161 AAGATAGACAAAAAA CGCCTGACGGC TCTC GCCGTCGACCG TTATCGCCATTCTGC YPDSF_1218 1391630 - 1393207 + | yersiniabactin siderophore biosynthetic protein TERM 1526 1393254 - 1393215 - f 90 -11.5 -3.72051 | overlap 1393216 1393219 1393240 CCCAATAAGCGCAAA CCGACCCGAAACAGGTT GAAATA AACCCGTTTCGGGTAGC ACCACTATTAGAAAT TERM 1527 1393253 - 1393216 - f 100 -15 -2.82749 | overlap 1393215 1393219 1393240 CCAATAAGCGCAAAC CGACCCGAAACAGGTT GAAATA AACCCGTTTCGGGTAG CACCACTATTAGAAA TERM 1528 1393250 - 1393219 - f 100 -15.3 -2.66593 | overlap 1393216 1393215 1393240 ATAAGCGCAAACCGA CCCGAAACAGGTT GAAATA AACCCGTTTCGGG TAGCACCACTATTAG TERM 1529 1393250 - 1393240 - f 87 -8.2 -4.43208 | overlap 1393219 1393216 1393215 ACAGGTTGAAATAAA CCCG TTT CGGG TAGCACCACTATTAG TERM 1530 1393539 - 1393520 - g 76 -12.8 -2.60244 | overlap 1393516 GCCGGAATTAAGCGA CGCCGGCG TCAC CGCCAGCG ACAAACTCCCCAGAG YPDSF_1219 1393338 - 1395359 + | pesticin/yersiniabactin receptor protein TERM 1531 1395391 - 1395371 - f 93 -11.2 -4.15565 | opp_overlap 1395371 CTGATTATTGTAAAA GGGATACC GAAAA GGTATCCC TTTTACACCACTAGT TERM 1532 1395371 - 1395391 + F 93 -11.2 -4.08945 | opp_overlap 1395371 CTGATTATTGTAAAA GGGATACC GAAAA GGTATCCC TTTTACACCACTAGT TERM 1533 1396261 - 1396244 - f 80 -2.7 -5.44721 | ATTATGTCAAAAAAA TATCAGC CATT GCTTATA ACTCATTATATGTCA TERM 1534 1396774 - 1396756 - g 76 -4.6 -4.96501 | GCGTAGAAAAACAAA TTTCCAGA CTA CCTGAAAA CACAGCATTAGATGT TERM 1535 1396940 - 1396927 - g 93 -3.8 -5.72616 | opp_overlap 1396927 ATTTATACAAAAAAA GGGA GAGTCA TCCC ATTTCACCTTCCCGT YPDSF_1220 1396605 - 1397159 + | hypothetical protein TERM 1536 1397221 - 1397188 - f 100 -15.5 -3.31322 | opp_overlap 1397188 1397180 1397195, overlap 1397195 1397198 TGTAATGGCCGACAA CCCTAAATAAGGGTT TTGC ATCCCTTATTTAGGG CTCACCAGCTTTCTC YPDSF_1221 1397299 - 1397484 + | transcriptional regulator YPDSF_1222 1397503 - 1397667 + | hypothetical protein YPDSF_1223 1397673 - 1398254 + | hypothetical protein YPDSF_1224 1398244 - 1398453 + | hypothetical protein TERM 1537 1398461 - 1398486 + F 100 -10.5 -4.34402 | GACGTTAAATCTGTA TGTGCGGAG GAGAATAG CTCCGCACA TTTTAATATGCACCA TERM 1538 1398723 - 1398707 - g 70 -4.4 -4.70169 | GCATATGGAAGAAAA GCTCAC AGGGA ATGAGC TTGAAATGCTTTATG YPDSF_1225 1398696 - 1398809 + | hypothetical protein YPDSF_1226 1399632 - 1398853 - | transposase/IS protein TERM 1539 1399551 - 1399565 + g 77 -11.4 -3.3506 | overlap 1399564 CTGCCTGTTGTGACA GCGCAG GCG CTGCGC TTATAAGGCTTTCCA YPDSF_1227 1400654 - 1399632 - | transposase TERM 1540 1400676 - 1400658 - H 100 -13.2 -4.01078 | AAAAGTGACCATAAA CTCTCCTG AAT CAGGAGAG CAGATTACCCCCTGG YPDSF_1228 1401132 - 1401317 + | hypothetical protein YPDSF_1229 1401333 - 1401557 + | hypothetical protein YPDSF_1230 1401908 - 1401567 - | ABC-type sugar transport system, ATPase components YPDSF_1231 1402684 - 1401794 - | binding-protein-dependent transport system, ATP-binding component YPDSF_1232 1403536 - 1402709 - | binding-protein-dependent transport system, inner membrane component TERM 1541 1402917 - 1402900 - G 70 -8.5 -3.80174 | AGAGCGTTAGAACAA TCTGGAA TTCG TTCCAGA TAAAGAACAGTGTCA YPDSF_1233 1404389 - 1403529 - | binding-protein-dependent transport system, inner membrane component TERM 1542 1404455 - 1404415 - R 70 -7.7 -3.6279 | gap 1, overlap 1404416 AAACCTGCGTAAGAA TTTCATTTCCGTCAGTGC GCAACT GCACTGACGGAAA-GCGA TTAACGGGACAACGC TERM 1543 1404456 - 1404416 - R 72 -9.9 -2.77192 | gap 1, overlap 1404415 AACCTGCGTAAGAAT TTCA-TTTCCGTCAGTGC GCAACT GCACTGACGGAAAGCGAT TAACGGGACAACGCT YPDSF_1234 1405724 - 1404456 - | exported solute-binding protein YPDSF_1235 1406767 - 1405754 - | oxidoreductase TERM 1544 1407005 - 1406971 - R 100 -15.3 -3.88232 | gap 1, overlap 1406997 1407000 TCGTTTACAGAACAA TGATGGTGCTCTTGAG CAAA CTCAA-AGCACCATCA CGGTGCGTAAGGTTC TERM 1545 1407011 - 1406997 - R 72 -7.8 -3.87149 | opp_overlap 1407010, overlap 1406971 1407000 TTGAGCAAACTCAAA GCACCA TCA CGGTGC GTAAGGTTCGCTTTA YPDSF_1236 1408232 - 1407435 - | GntR family putative transcriptional regulatory protein YPDSF_1237 1408249 - 1408410 + | hypothetical protein YPDSF_1239 1408783 - 1408577 - | hypothetical protein YPDSF_1240 1409201 - 1409635 + | hypothetical protein YPDSF_1241 1409647 - 1410216 + | hypothetical protein TERM 1546 1410308 - 1410337 + T 86 -11.7 -3.31428 | gap 1, overlap 1410304 1410307 1410305 CAAACAGGTACTCAG TAGCTCTGATT-AG TAA CTCAATCAGAGCTA TCTATTGTATTTAAA TERM 1547 1410660 - 1410639 - T 84 -10.1 -3.74693 | CGCCACTGTATTAAA GGTGATCGC TCAG GCGGTCACC AAACTCGATAATAAA YPDSF_1242 1410972 - 1410634 - | transposase YPDSF_1243 1411832 - 1410972 - | hypothetical protein YPDSF_1244 1412956 - 1411880 - | hypothetical protein TERM 1548 1412902 - 1412932 + g 71 -11.2 -2.72511 | overlap 1412901 CACTTTCCTTATATT GTTCCCGAATTCTT TGT AAGTATCCGGGAAC CTTTGGGGGGATGCA YPDSF_1245 1413312 - 1413022 - | hypothetical protein YPDSF_1246 1413565 - 1413293 - | hypothetical protein TERM 1549 1413840 - 1413856 + G 85 -7.2 -4.8048 | overlap 1413836 AATTGGTTAACCCTG CGCGCC GGGCG GGTGCG TTTTTGGTCTGCGCC YPDSF_1247 1413696 - 1413950 + | hypothetical protein YPDSF_1248 1413947 - 1414246 + | hypothetical protein YPDSF_1249 1414263 - 1414550 + | hypothetical protein TERM 1550 1415024 - 1415039 + G 70 -3.3 -4.89233 | GTTAACAATGCTCAC TACTC CCCTTT GAGTA TTTTTGGTGTTGGTA YPDSF_1250 1414985 - 1415200 + | membrane protein YPDSF_1251 1415197 - 1415502 + | hypothetical protein TERM 1551 1415783 - 1415815 + F 71 -10 -2.62614 | overlap 1415782 1415799 1415803 CACTTTCCTGTTAAT GGTAACCACTCTAT ATCGC GTAAAGTGGTTACC CGTTTTATAGTTTTC TERM 1552 1416391 - 1416381 - g 76 -4.6 -5.0133 | TACTGCCGTAAAAAA GGGC TTT ACCC CGCGCAGATAGCGCA YPDSF_1253 1416177 - 1416596 + | hypothetical protein YPDSF_1254 1416668 - 1417627 + | transposase YPDSF_1255 1417847 - 1418191 + | hypothetical protein YPDSF_1256 1418946 - 1418773 - | hypothetical protein TERM 1553 1419105 - 1419088 - H 75 -3.3 -5.12172 | TAGCAATAAATAAAA CGTAAGG CGTT CCCGACG GGTGGCTCAGTACAT YPDSF_1258 1420002 - 1420559 + | hypothetical protein TERM 1554 1420810 - 1420797 - T 100 -9.5 -5.69473 | TAGATCACAAAAAAA CCGCC TCTC GGCGG TTAACGACATACTCG TERM 1555 1420897 - 1420917 + T 76 -10.5 -2.90714 | opp_overlap 1420896, overlap 1420900 CGCACAGCCATAAGC CGAGGGATT TTA AATCCCTTG TGTCTACCGATTTCA TERM 1556 1420900 - 1420914 + T 73 -8.6 -3.5947 | opp_overlap 1420896, overlap 1420897 ACAGCCATAAGCCGA GGGATT TTA AATCCC TTGTGTCTACCGATT TERM 1557 1421112 - 1421128 + T 76 -10.9 -2.62616 | TCGAACTCGCGACCC CGACCTT GGC AAGGTCG TGCTCTACCAACTGA YPDSF_1259 1421847 - 1421299 - | phosphatidylglycerophosphate synthetase uvrC 1423759 - 1421906 - | excinuclease ABC subunit C YPDSF_1261 1424387 - 1423731 - | response regulator TERM 1558 1424189 - 1424176 - GH 71 -5.3 -4.57569 | opp_overlap 1424174 1424176, overlap 1424184 GTATCCGGCGAAAAA CGTAA AATT TTACG TGTTGCTTCCAACCC TERM 1559 1424647 - 1424637 - H 78 -4 -5.14477 | CATACATTCAAAAAA CTAA TTA TTAG CATTAGATAAGTTAA YPDSF_1262 1425050 - 1425274 + | hypothetical protein YPDSF_1263 1425399 - 1425743 + | membrane protein YPDSF_1264 1426025 - 1425771 - | hypothetical protein TERM 1560 1426339 - 1426313 - R 85 -5.9 -5.18357 | gap 1 CAACTGATGAAAAAA CAGCCGCA-CAG TGAA CTAATACGGCTG TTATTATTATATAGA YPDSF_1265 1426916 - 1426365 - | attachment invasion locus protein TERM 1561 1429274 - 1429285 + G 70 -2.2 -5.00895 | opp_overlap 1429263 AATCCATCTACAAAA TGCC AGCC GGTA TTTTTATGTCATGGG TERM 1562 1429308 - 1429320 + G 76 -6.2 -4.73614 | GTCATGGGTTTGTAT GGCG TTTTT CGCC TTTGTTTTGGTACTG YPDSF_1266 1428031 - 1429455 + | D-alanine/D-serine/glycine permease TERM 1563 1429467 - 1429501 + T 100 -17.4 -3.59738 | opp_overlap 1429472, overlap 1429472 ATAACCACAGTGTGA TAAAACGGTGCCAGAG GTG TTCTGGTACCGTTTTA TTTCCCCCTCTAATC TERM 1564 1429472 - 1429496 + T 100 -12.9 -4.87803 | opp_overlap 1429472, overlap 1429467 CACAGTGTGATAAAA CGGTGCCAGAG GTG TTCTGGTACCG TTTTATTTCCCCCTC TERM 1565 1429496 - 1429472 - T 93 -10 -4.39426 | opp_overlap 1429472 1429467 CACAGTGTGATAAAA CGGTGCCAGA GGTGT TCTGGTACCG TTTTATTTCCCCCTC YPDSF_1267 1430759 - 1429581 - | hypothetical protein TERM 1566 1431075 - 1431120 + H 80 -9.9 -3.69684 | gap 1, opp_overlap 1431083 TGCTGATTAGCTTAT GGTTAATAGGTGTCATTAGCCG CGA CGACTAATGACATC-ATCAGCC TTATTCAATAAATTT TERM 1567 1431113 - 1431083 - H 100 -13.4 -3.04263 | opp_overlap 1431075 AGCTTATGGTTAATA GGTGTCATTAGCCG CGA CGACTAATGACATC ATCAGCCTTATTCAA YPDSF_1268 1431153 - 1431752 + | TrpR binding protein WrbA TERM 1568 1431831 - 1431809 - T 91 -7.7 -4.8667 | opp_overlap 1431809 1431807 1431805 TAGACGTCATAAAAA GCACCGC GCGATGATG GCGGTGC TGTATTTTAAGCTTC YPDSF_1269 1433142 - 1431838 - | hypothetical protein TERM 1569 1432324 - 1432339 + g 77 -9 -4.00042 | TCCCCCTACCGCCCA TGCAGG CTCG CCTGCA TTATTTGATACCCAG TERM 1570 1433084 - 1433069 - G 74 -7.5 -4.20136 | overlap 1433070 ATCCCTAAAATTAAA CGCCG ACGTGA CGGCG ACACCGCCTCATCAT TERM 1571 1433109 - 1433129 + g 100 -12.5 -4.63586 | overlap 1433099 1433110 CATCATCCGGTTGAT ACGGCCCGA ATT TCGGGCCGG TTTTGTCTCTCATGT TERM 1572 1433110 - 1433128 + g 100 -16 -3.37067 | overlap 1433099 1433109 ATCATCCGGTTGATA CGGCCCGA ATT TCGGGCCG GTTTTGTCTCTCATG YPDSF_1270 1434283 - 1433153 - | hypothetical protein TERM 1573 1433793 - 1433815 + g 74 -8.4 -4.08485 | AGTGCCAGATCCCCA GCCTTCACTG CAT CGGTGAACGC TTTGGTTTGGCTGAC YPDSF_1271 1435161 - 1434313 - | membrane protein TERM 1574 1435454 - 1435425 - R 73 -8.6 -3.59698 | opp_overlap 1435427 1435429, overlap 1435427 TGATTTTACATACAA GATAGCCCCCTG TTATGG CAGGAGGCTATG TGTAGTTAAACGTAT TERM 1575 1435427 - 1435452 + r 73 -9.7 -3.00476 | opp_overlap 1435425 1435427, overlap 1435429 ATTTTACATACAAGA TAGCCCCCTGT TATG GCAGGAGGCTA TGTGTAGTTAAACGT TERM 1576 1435452 - 1435427 - R 81 -11.2 -3.37466 | opp_overlap 1435427 1435429, overlap 1435425 ATTTTACATACAAGA TAGCCCCCTG TTATGG CAGGAGGCTA TGTGTAGTTAAACGT YPDSF_1272 1436978 - 1435494 - | proline permease TERM 1577 1435597 - 1435583 - G 76 -4.2 -4.91109 | overlap 1435585 GGCTGACGACAAAAA TAGCCA AAC TGGCAA ACAAGAAGCCTGGAA YPDSF_1273 1437205 - 1437008 - | hypothetical protein TERM 1578 1437982 - 1437971 - g 78 -2.2 -5.26875 | gap 1, overlap 1437972 TGCGTAATCAAAAAA GTGCC CAT GGC-C GCGCGGGCATGGTAC TERM 1579 1439776 - 1439799 + G 70 -9.6 -3.28745 | opp_overlap 1439757, overlap 1439779 AGTAATGCCATCGCC GAAGTCCGTG AAGC CGTGGACTTC TTGCATTATTACGCC putA 1437550 - 1441521 + | trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase TERM 1580 1441607 - 1441594 - f 74 -9.5 -3.39895 | opp_overlap 1441594 CGGTTTATCAATTAA GGCCC TTCG GGGCC TTTTGCCAACCAACA TERM 1581 1441594 - 1441607 + F 83 -9.5 -4.07568 | opp_overlap 1441594 CGGTTTATCAATTAA GGCCC TTCG GGGCC TTTTGCCAACCAACA YPDSF_1275 1441985 - 1442320 + | hypothetical protein YPDSF_1276 1442320 - 1442691 + | hypothetical protein TERM 1582 1442730 - 1442706 - T 100 -12.2 -3.78312 | opp_overlap 1442704 AAATTATCTAGCAAA TTGGGGACCA TACCG TGGCCCCCAA CATATTAAAAATGCC TERM 1583 1442826 - 1442812 - T 100 -10 -4.72272 | opp_overlap 1442806 TTTTGCCACCAAAAA CCACTG AAT CAGTGG TTGAGGTTATTGACA TERM 1584 1442905 - 1442931 + T 72 -10.1 -2.88849 | gap 1, opp_overlap 1442894, overlap 1442900 1442906 ACATCCATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCTCTGCC TERM 1585 1442906 - 1442932 + T 84 -10.1 -3.82218 | gap 1, opp_overlap 1442894, overlap 1442900 1442905 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCTCTGCCT YPDSF_1277 1443744 - 1442983 - | putative amino-acid ABC transporter ATP-binding protein YecC YPDSF_1278 1444409 - 1443747 - | amino-acid ABC transporter (permease) TERM 1586 1444390 - 1444371 - G 100 -12.2 -5.06816 | opp_overlap 1444370 ACCCTTCAATAAAAA TGGTGCTG AATC CAGCACCA ATTGCATACTTTCTG YPDSF_1281 1446320 - 1445328 - | D-cysteine desulfhydrase YPDSF_1282 1447118 - 1446609 - | protein FliZ TERM 1587 1447081 - 1447094 + g 95 -5.9 -5.47218 | opp_overlap 1447081 TAATCTTTTAAATAA CGGCT CAGC GGCCG TTTTTTTAACTGGAG fliA 1448062 - 1447340 - | flagellar biosynthesis sigma factor TERM 1588 1448234 - 1448244 + r 81 -5.4 -5.10064 | CCTTGAAGTGCATTC TCAG CGT CTGA TTTTTATCTGTTCCC TERM 1589 1448380 - 1448365 - R 91 -8.2 -4.69027 | overlap 1448355 AAACTGAGGTAAAAA CCCCGC CGCA GCAGGG TTGGAATAAGGGTAT YPDSF_1284 1449518 - 1448409 - | flagellin fliD 1449815 - 1451215 + | flagellar capping protein TERM 1590 1451326 - 1451340 + G 76 -12.8 -2.71144 | opp_overlap 1451335, overlap 1451326 TGATGCTGTTCGATG GGGCGC AAA GCGCCC TGATTCGCGCACGTA fliS 1451226 - 1451624 + | flagellar protein FliS YPDSF_1287 1451635 - 1451997 + | flagellar biosynthesis protein FliT TERM 1591 1452206 - 1452219 + F 82 -3.1 -5.46657 | TTATAGTCGAAGTGG CTTGC TATG GTAAG TTTTTTATTAAAATA YPDSF_1288 1452298 - 1453173 + | AraC family transcription regulator TERM 1592 1453339 - 1453350 + F 70 -5.8 -4.40561 | opp_overlap 1453348 CTTTTAGATATTTTG CGCT TTAA AGCG TTCTTTTTAAGGCCG TERM 1593 1453873 - 1453885 + G 100 -4.7 -5.80817 | overlap 1453874 CCGTATACAGCGCTT ACCCC AAT GGGGA TTTTTTTATGTTGCG TERM 1594 1453874 - 1453884 + G 74 -8.2 -4.06863 | overlap 1453873 CGTATACAGCGCTTA CCCC AAT GGGG ATTTTTTTATGTTGC TERM 1595 1454263 - 1454252 - g 70 -2.2 -4.90778 | opp_overlap 1454257, overlap 1454253 1454256 TTTAGCTAAACAAAA CCTA CCAC CAGG CAGCCAGGCGATTAT TERM 1596 1454990 - 1455009 + G 72 -3.6 -4.79223 | overlap 1454993 GCCATCGTTGCAGGT TAATGAAG ATAA CTTCAATA TTTTTAATCCTGTAC TERM 1597 1455401 - 1455388 - g 100 -6.7 -5.38549 | CTGAAATAACAAAAA TGCTC GCCA GAGCA GCGATGGAGAGTAAA YPDSF_1289 1453527 - 1456481 + | hypothetical protein YPDSF_1290 1456642 - 1457253 + | glycosidase TERM 1598 1457419 - 1457404 - T 80 -6.1 -4.8066 | opp_overlap 1457404 AAGATAACGCAAAAA CCCAC AGCTAA GTGGG TTGATATCTCATACG YPDSF_1291 1457915 - 1457439 - | hypothetical protein YPDSF_1292 1458105 - 1457926 - | hypothetical protein fliE 1458836 - 1458525 - | flagellar hook-basal body protein FliE TERM 1599 1458742 - 1458760 + g 70 -4.5 -4.72272 | gap 1, overlap 1458739 1458742 AGTTCACTGGCGAAG CCC-GCCT CTGC GGGCAGGG TTTTTGCTGACCCCG TERM 1600 1459325 - 1459343 + G 77 -11 -3.3573 | overlap 1459314 TTGTCGCCTTGATGC TCTGGGCT AAA AGCCCGGA TTATCGCGTCCTTTA fliF 1459189 - 1460901 + | flagellar MS-ring protein fliG 1460898 - 1461890 + | flagellar motor switch protein G fliH 1461965 - 1462594 + | flagellar assembly protein H fliI 1462491 - 1463993 + | flagellum-specific ATP synthase fliJ 1464093 - 1464539 + | flagellar biosynthesis chaperone YPDSF_1299 1464536 - 1465888 + | flagellar hook-length control protein FliK fliL 1466062 - 1466625 + | flagellar basal body-associated protein FliL TERM 1601 1466962 - 1466952 - g 76 -8.2 -4.18018 | opp_overlap 1466958 CTGGTGCATCTAAAA CCGC TAC GCGG TACTGCGCTATTCGT fliM 1466631 - 1467632 + | flagellar motor switch protein FliM TERM 1602 1467741 - 1467722 - g 76 -3.4 -5.1485 | overlap 1467726 CAAGCAACAGAAAAA CCCACGGC CACA ACCGAAGG CGTCTTTAAATCGCT fliN 1467629 - 1468045 + | flagellar motor switch protein FliN TERM 1603 1468202 - 1468228 + G 76 -12.2 -3.02144 | opp_overlap 1468197 1468196 CGCAATCAAGCGCCG CCCCCCCGGC CATGCCT GCAGGGGGGG TGTTAACGCAGGTGG YPDSF_1303 1468045 - 1468581 + | flagellar protein FliO fliP 1468578 - 1469402 + | flagellar biosynthesis protein FliP fliQ 1469508 - 1469777 + | flagellar biosynthesis protein FliQ fliR 1469708 - 1470562 + | flagellar biosynthesis protein FliR YPDSF_1307 1470996 - 1471415 + | hypothetical protein TERM 1604 1471440 - 1471455 + T 71 -8.2 -3.55203 | overlap 1471449 TGTCGCTGCTTATCG CCCCGT TTCG GCGGGG TTTACCCCCCCTTTT TERM 1605 1471449 - 1471466 + T 87 -8.3 -4.41548 | overlap 1471440 TTATCGCCCCGTTTC GGCGGGG TTTA CCCCCCC TTTTCTGACCTCTCG YPDSF_1308 1472632 - 1471673 - | sugar kinase TERM 1606 1471985 - 1471969 - G 71 -7.9 -4.11216 | CCCCCATTTTGAAAA CGGTGTG GCC CACCCCG CGGTTCAGGAAAAAC YPDSF_1309 1473703 - 1472681 - | sugar ABC transporter, permease YPDSF_1310 1475283 - 1473706 - | sugar ABC transporter, ATP-binding protein YPDSF_1311 1476344 - 1475349 - | sugar-binding periplasmic protein TERM 1607 1475475 - 1475489 + g 86 -5.6 -5.24129 | CACCCCCAGATTCAT CCCATC AGT GAGGGG TTTTTTATCGAGCAG TERM 1608 1475533 - 1475507 - G 88 -14.4 -3.4252 | opp_overlap 1475504 1475503 1475501 TTTTATCGAGCAGAA GCTTGGCGACGG TAT CCATCGCCAGGC TGGCATCTTTAGGAT YPDSF_1312 1477466 - 1476387 - | sugar transport system permease protein YPDSF_1313 1479662 - 1477596 - | short chain dehydrogenase YPDSF_1314 1479904 - 1480881 + | transcriptional regulatory protein flgL 1481923 - 1480910 - | flagellar hook-associated protein FlgL TERM 1609 1481217 - 1481229 + g 70 -3.3 -4.77157 | ACCTCGTCAGAGGCT CCTTG CAG CGGGG TTTTTAATGAATTCA TERM 1610 1481260 - 1481270 + g 85 -4 -5.40072 | GTACCGTATCAATGG TATC AAA GATA TTTTTTTCCGCAGCA flgK 1483693 - 1482029 - | flagellar hook-associated protein FlgK TERM 1611 1482270 - 1482255 - G 70 -8.2 -3.76402 | opp_overlap 1482265 ACGTTACTGACTAAA CCGGCG TAAG CACCGG ACAAGGTGGTTTTAC TERM 1612 1483236 - 1483253 + g 72 -9.9 -3.38178 | CCGTCATCCATATCC CGCAGAT ATTT ATCTGCG TTCTGGAATTGGTTC flgJ 1484936 - 1483992 - | peptidoglycan hydrolase flgI 1486045 - 1484936 - | flagellar basal body P-ring protein flgH 1486749 - 1486060 - | flagellar basal body L-ring protein TERM 1613 1486856 - 1486890 + r 72 -9.8 -2.74144 | overlap 1486855 AGACCTATTATGCTG CGGCGATCAGGGGGCA TGA TGCCCCCCGAAAGCAG GTTTACAGCTGAGCC YPDSF_1320 1487591 - 1486893 - | flagellar basal-body rod protein FlgG flgF 1488201 - 1487572 - | flagellar basal body rod protein FlgF flgE 1489509 - 1488223 - | flagellar hook protein FlgE TERM 1614 1489292 - 1489268 - G 80 -4.9 -5.1287 | overlap 1489269 1489270 TGCATACGGAAAAAA CCGTTCTGGCT GAT AGCCAGATCCA AACGACGATTAGTGG flgD 1490388 - 1489711 - | flagellar basal body rod modification protein flgC 1490807 - 1490403 - | flagellar basal body rod protein FlgC flgB 1491226 - 1490813 - | flagellar basal body rod protein FlgB flgA 1491408 - 1492163 + | flagellar basal body P-ring biosynthesis protein FlgA YPDSF_1327 1492314 - 1492616 + | anti-sigma28 factor FlgM YPDSF_1328 1492635 - 1493075 + | flagella synthesis protein FlgN TERM 1615 1493126 - 1493156 + T 100 -17 -3.51161 | opp_overlap 1493126, overlap 1493129 ATCCTTTTAAAAAAA CAACGCCGCTCA ATTAACC TGAGCGGCGTTG TTCTCTGGACGTTTG TERM 1616 1493156 - 1493126 - T 100 -17.7 -5.40474 | opp_overlap 1493126 1493129 ATCCTTTTAAAAAAA CAACGCCGCTCAA TTAAC CTGAGCGGCGTTG TTCTCTGGACGTTTG TERM 1617 1493129 - 1493153 + T 100 -12.9 -3.885 | opp_overlap 1493126, overlap 1493126 CTTTTAAAAAAACAA CGCCGCTCA ATTAACC TGAGCGGCG TTGTTCTCTGGACGT YPDSF_1329 1495337 - 1493265 - | hypothetical protein TERM 1618 1495353 - 1495321 - G 91 -11.3 -4.26076 | opp_overlap 1495328, overlap 1495325 1495327 1495328 TTATCTTTACCAAAA TAAATATCCTCCGGC ATA GCCGGAGGTTTTTCA TATGCGCCTATAAGG TERM 1619 1495349 - 1495325 - G 100 -9.9 -4.72007 | opp_overlap 1495328, overlap 1495321 1495327 1495328 CTTTACCAAAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCATATGCGCCTAT TERM 1620 1495347 - 1495327 - G 91 -12.5 -3.97149 | opp_overlap 1495328, overlap 1495325 1495321 1495328 TTACCAAAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 1621 1495346 - 1495328 - G 90 -16 -2.97205 | opp_overlap 1495328, overlap 1495327 1495325 1495321 TACCAAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 1622 1495328 - 1495346 + g 100 -16 -4.8048 | opp_overlap 1495328 1495327 1495325 1495321 TACCAAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC YPDSF_1330 1495885 - 1495427 - | transposase for the IS1541 insertion element YPDSF_1331 1496879 - 1495875 - | invasin TERM 1623 1495998 - 1496016 + g 100 -16 -4.37092 | opp_overlap 1495998 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAT TERM 1624 1496016 - 1495998 - G 93 -16 -3.07307 | opp_overlap 1495998 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAT YPDSF_1332 1497965 - 1497543 - | flagellar protein FlhE precursor flhA 1500043 - 1497965 - | flagellar biosynthesis protein FlhA TERM 1625 1499036 - 1499049 + g 74 -6.7 -4.42062 | overlap 1499032 GGGTGCTTCTACTGC CACAG GCTG CTGTG TTTGTTTACCACGTA TERM 1626 1499482 - 1499494 + g 74 -2.6 -5.17576 | CAGCCTCTTGCGTAA CGTC AGAGC GGCG TTTTTTCGCTTCATC TERM 1627 1499765 - 1499777 + g 73 -9.1 -3.78775 | opp_overlap 1499764 1499761 CATCAGAATAATACG CGTGG AAG CCACG TTTAGTGATAGACGC flhB 1501203 - 1500043 - | flagellar biosynthesis protein FlhB TERM 1628 1500446 - 1500459 + g 70 -9.5 -3.21218 | ACCATCATCCGACGA CGGGC CATC GCCCG TTGCTGCTGACGAAT TERM 1629 1501947 - 1501933 - g 70 -4.2 -4.65078 | overlap 1501944 ATAGGTGCAACAAAA GGCACA TCA TACGCC TCCAAAGCGGCACGA TERM 1630 1501997 - 1501984 - g 78 -2.3 -5.27476 | overlap 1501985 TTTAAGAAAACAAAA TTCCC ATTT GGGAT GTCGCTACCTACATG YPDSF_1335 1501735 - 1502193 + | membrane protein YPDSF_1336 1502187 - 1502513 + | acyl carrier protein TERM 1631 1502520 - 1502537 + T 75 -8.4 -3.89336 | opp_overlap 1502519 TATGACTGAAATAGG CTGGGC TTAATT GCCCAG TTTCGCTTTGGTTAA TERM 1632 1502650 - 1502633 - T 70 -5.5 -4.57073 | CAGTTCGCCCAAAAA CGGCTTG GCCA CAAGTCG ATGAAAATGACTCAT TERM 1633 1502807 - 1502780 - T 100 -7.8 -5.77856 | AATAAATTAAAAAAA GACCGAATACGA TTCC TGATATTCGGTC TAGGGAAATGGCTCT YPDSF_1337 1503377 - 1503036 - | hypothetical protein YPDSF_1338 1504358 - 1503474 - | copper resistance protein D TERM 1634 1504309 - 1504283 - G 77 -12.4 -3.03903 | overlap 1504285 AAAAGGCGGTGAATA CAGTGATGCCAA ACA TCAGCATCACTG CCATAAAGTGCAGAA YPDSF_1339 1504747 - 1504361 - | copper resistance protein TERM 1635 1505081 - 1505069 - R 75 -3.3 -5.18715 | overlap 1505070 AGAAAAACAAGAAAA GGCGA GGA TCGCG GGGAGGGATAGGCAA TERM 1636 1505132 - 1505104 - R 100 -10.3 -4.47456 | ATAGGCAACAACAAA GCCGCAGTACC CAATAAT AGTACCGCGGC GAATATTTTCTCAAT YPDSF_1340 1505662 - 1505153 - | ferritin TERM 1637 1505509 - 1505528 + g 70 -2.2 -5.00616 | gap 1, opp_overlap 1505526, overlap 1505513 AACGTTCCATATGTT GCATTTCTT CTT GAGA-ATGC TTTTTTAAAAAGGCA YPDSF_1341 1506063 - 1506293 + | DNA polymerase III subunit theta YPDSF_1342 1507303 - 1506353 - | proline iminopeptidase TERM 1638 1507764 - 1507781 + r 100 -9.8 -5.66229 | opp_overlap 1507764 CGTTTCGTGAGTTAA CCCGCC ATTATC GGCGGG TTTTTTATTGTTCAT TERM 1639 1507781 - 1507764 - R 76 -10.5 -3.05384 | opp_overlap 1507764 CGTTTCGTGAGTTAA CCCGCCA TTAT CGGCGGG TTTTTTATTGTTCAT YPDSF_1343 1510076 - 1508025 - | oligopeptidase B TERM 1640 1510332 - 1510312 - R 72 -9.7 -2.83112 | opp_overlap 1510326 ATTGAATTGACCAGA TGGAGGGCA ATA TGCCCTCAA ACATAGCGGGTTATT YPDSF_1344 1510830 - 1510405 - | hypothetical protein YPDSF_1345 1511230 - 1510922 - | hypothetical protein YPDSF_1346 1511590 - 1511270 - | hypothetical protein YPDSF_1347 1513066 - 1511684 - | ATP-dependent RNA helicase DbpA TERM 1641 1514420 - 1514380 - g 72 -9.8 -3.37975 | gap 1, overlap 1514370 ACTGACCAGCCAGAA TATCACCTATCGCGGGCTG GAAA CTGCCCT-GATAGGCGATA CACAGATTCGGTTAT purT 1513379 - 1514560 + | phosphoribosylglycinamide formyltransferase 2 TERM 1642 1514596 - 1514623 + T 89 -7.1 -5.04597 | opp_overlap 1514596 1514600 ACGCTAGCAAATAAA TAAACCCGC CATTCAGCCA GCGGGTTTA TTTTTATCTATCAAT TERM 1643 1514623 - 1514596 - T 87 -8.5 -4.49958 | opp_overlap 1514596, overlap 1514600 ACGCTAGCAAATAAA TAAACCCGCCA TTCAGC CAGCGGGTTTA TTTTTATCTATCAAT TERM 1644 1514619 - 1514600 - T 74 -4.9 -4.80736 | opp_overlap 1514596, overlap 1514596 TAGCAAATAAATAAA CCCGCCA TTCAGC CAGCGGG TTTATTTTTATCTAT YPDSF_1349 1514943 - 1514686 - | hypothetical protein YPDSF_1350 1515108 - 1516484 + | para-aminobenzoate synthase component I YPDSF_1351 1516481 - 1517080 + | hypothetical protein TERM 1645 1517089 - 1517104 + F 86 -11.8 -3.07962 | opp_overlap 1517089 TATTTGACTCATAAA GCCGCC ATTT GGCGGC TGTTAACCTGTGACA TERM 1646 1517104 - 1517089 - f 100 -11.8 -3.92373 | opp_overlap 1517089 TATTTGACTCATAAA GCCGCC ATTT GGCGGC TGTTAACCTGTGACA TERM 1647 1517491 - 1517471 - f 70 -7.5 -3.79993 | TTAGAGACCAAAATA TACCGGGCC ATT GACCCCGTA GCTGAATAACTAGAA TERM 1648 1518221 - 1518233 + G 71 -5.5 -4.56607 | opp_overlap 1518219, overlap 1518219 GCAAAACATACTACT CCATC GGC GGTGG TTTTATCGTTGATGA YPDSF_1352 1517788 - 1519152 + | L-serine dehydratase TERM 1649 1519134 - 1519152 + T 78 -2.4 -5.47218 | overlap 1519138 TGGTGGCCTGGCGAT TAAAGTGC AGT GTACTTGA TTTTTTTCGCTGACA TERM 1650 1519303 - 1519321 + T 100 -8.8 -4.82901 | opp_overlap 1519291 AAAGGATGGCGCGGC TAGCCCCC AGG GAGGGCTA TTTTTATGCAGGGAA TERM 1651 1519430 - 1519391 - T 100 -15.2 -3.62046 | opp_overlap 1519391 GCACTTTGTCAACAA CCTCTAATGCACGTCA GTTAAATA TGACGGGCATTAGAGG TTTACACCATCACCG TERM 1652 1519391 - 1519430 + T 100 -15.2 -3.55444 | opp_overlap 1519391 GCACTTTGTCAACAA CCTCTAATGCACGTCA GTTAAATA TGACGGGCATTAGAGG TTTACACCATCACCG YPDSF_1353 1519929 - 1519432 - | 4-hydroxyphenylacetate 3-monooxygenase coupling protein YPDSF_1354 1521512 - 1519950 - | 4-hydroxyphenylacetate 3-monooxygenase YPDSF_1355 1522947 - 1521580 - | 4-hydroxyphenylacetate permease TERM 1653 1522174 - 1522204 + g 75 -10.5 -3.36569 | overlap 1522165 1522171 1522175 AATTTCCCGCCACAT CGCGGATTGTGGT AAGGC ACCATAATCCGCC TGTTTCGCCAATTGC TERM 1654 1522175 - 1522203 + g 81 -14 -2.6162 | overlap 1522165 1522174 1522171 ATTTCCCGCCACATC GCGGATTGTGGT AAGGC ACCATAATCCGC CTGTTTCGCCAATTG TERM 1655 1522879 - 1522894 + g 76 -3.2 -5.06414 | GACGGACTGCTGCTG CGCACT TAAT GGTGTG TTTTTATTGACCGGC YPDSF_1356 1523779 - 1522973 - | 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase TERM 1656 1523714 - 1523731 + g 91 -2.7 -5.72207 | GCTACACAAACCTAG CCATAAG CCAA TTTGTGG TTTTTTTGCTTTCAG YPDSF_1357 1524593 - 1523790 - | 2-oxo-hept-3-ene-1,7-dioate hydratase TERM 1657 1523980 - 1523992 + g 71 -10.5 -3.10344 | opp_overlap 1523973 TGATTCAATACCGCC GCGGC AAC GCCGC TCTCTTCAATCACGC YPDSF_1358 1524985 - 1524587 - | 5-carboxymethyl-2-hydroxymuconate delta-isomerase YPDSF_1359 1525867 - 1525010 - | 3,4-dihydroxyphenylacetate 2,3-dioxygenase YPDSF_1360 1527383 - 1525986 - | 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase TERM 1658 1526552 - 1526534 - G 74 -2.3 -5.06414 | TCTCTTGAATAAAAA TGCGCGA ACCCG CCGTGCA ACGTTCACCATTGAG YPDSF_1361 1528144 - 1527380 - | 5-carboxymethyl-2-hydroxymuconate delta-isomerase YPDSF_1362 1528773 - 1528141 - | hypothetical protein TERM 1659 1528936 - 1528912 - H 78 -10.3 -3.31144 | opp_overlap 1528910 1528912 1528915, overlap 1528915 1528934 TCGTGATCTTGATAA CAATTTATTTA CAA TAAATAAATTG TCTTTAAAAAAACAA TERM 1660 1528912 - 1528936 + H 78 -10.3 -3.34398 | opp_overlap 1528912 1528915 1528934, overlap 1528910 1528915 TCGTGATCTTGATAA CAATTTATTTA CAA TAAATAAATTG TCTTTAAAAAAACAA TERM 1661 1529199 - 1529209 + G 87 -4.6 -5.42862 | TTGCAGGCTCGTGAA GCCG CTA TGGC TTTTTTTCGGCCTAT YPDSF_1363 1529157 - 1529624 + | homoprotocatechuate degradative operon repressor TERM 1662 1529712 - 1529685 - f 100 -17 -3.62046 | opp_overlap 1529679 GTACGTTGTCAATAA CCTCAGGGGAGC CGAA GCGCCCCTGAGG TTCCACTCTCTGCTT TERM 1663 1531023 - 1531009 - f 72 -6.4 -4.24384 | overlap 1531004 ACCAGCAAAATCAAA TCTCGC CCA GCGAAA TTAAACGCACCGACG YPDSF_1366 1531979 - 1532953 + | PTS system, mannose-specific IIAB component YPDSF_1367 1533045 - 1533842 + | PTS system, mannose-specific IIC component TERM 1664 1534217 - 1534250 + G 70 -9.5 -3.33162 | overlap 1534225 CATTAAAGTGGGTCT GATGGGGCCACTGGC CGGT GTCGGTGACCCGATC TTCTGGGGTACCGTA YPDSF_1368 1533858 - 1534736 + | mannose-specific PTS system protein IID TERM 1665 1534759 - 1534782 + F 100 -8.8 -4.89567 | opp_overlap 1534762, overlap 1534762 GATTATCTTCATCCA AAACCGGGGG CTTG CTCCCGGTTA TTTTATCTTTTAGAC TERM 1666 1534779 - 1534762 - f 79 -8.3 -4.18494 | opp_overlap 1534762 1534759 TATCTTCATCCAAAA CCGGGGG CTTG CTCCCGG TTATTTTATCTTTTA TERM 1667 1534762 - 1534779 + F 100 -10.5 -4.52747 | opp_overlap 1534762, overlap 1534759 TATCTTCATCCAAAA CCGGGGG CTTG CTCCCGG TTATTTTATCTTTTA YPDSF_1369 1534936 - 1535397 + | hypothetical protein TERM 1668 1536132 - 1536121 - g 78 -2.2 -5.24449 | CAGAAACGGAAAAAA TGCG CAGT CACA GTTTTTGGGTGTTGG YPDSF_1370 1535826 - 1536395 + | hypothetical protein TERM 1669 1536488 - 1536450 - T 100 -24.8 -3.00946 | opp_overlap 1536454, overlap 1536454 CTGCGCGATAAATGA GAAATCCCCCGGCGATAT ATC AAATCGCCGGGGGATTTC AGTAAAGCACCTGTT TERM 1670 1536454 - 1536484 + T 100 -19.8 -3.64703 | opp_overlap 1536450 1536454 GCGATAAATGAGAAA TCCCCCGGCGATAT ATC AAATCGCCGGGGGA TTTCAGTAAAGCACC TERM 1671 1536484 - 1536454 - T 100 -19.8 -4.17701 | opp_overlap 1536454, overlap 1536450 GCGATAAATGAGAAA TCCCCCGGCGATAT ATC AAATCGCCGGGGGA TTTCAGTAAAGCACC YPDSF_1371 1538847 - 1536556 - | ferrichrome receptor protein TERM 1672 1536898 - 1536908 + g 74 -6.8 -4.33165 | GTTACCGTTGTTCGT CCCA TTT TGGG TTTTAGTCAGTTTAG TERM 1673 1538393 - 1538419 + g 71 -5.8 -4.36914 | overlap 1538394 1538416 1538418 CGAATACGGTAATTC TGTGATGGGTTA CCA TAACCCCGCACG TTTTGTACCGAAGCG TERM 1674 1538785 - 1538807 + g 74 -12 -2.82623 | opp_overlap 1538783 1538781 1538786, overlap 1538784 GACGCACAAAAGACG AGGAGCCGAA CGT TTCGGCTCCG TACTTATGGAGAGAG TERM 1675 1538806 - 1538786 - G 90 -15.5 -2.98789 | opp_overlap 1538785 1538784, overlap 1538783 1538781 ACGCACAAAAGACGA GGAGCCGAA CGT TTCGGCTCC GTACTTATGGAGAGA YPDSF_1372 1539088 - 1538939 - | hypothetical protein TERM 1676 1540364 - 1540346 - g 71 -6.6 -4.22214 | AGTGAGCGAAAACAA CGCGAAGA TGC CCTGCGCG CCAGTGAAGCTGCCC YPDSF_1373 1539191 - 1541272 + | hypothetical protein TERM 1677 1541277 - 1541308 + F 100 -9.5 -4.98255 | overlap 1541279 TCACCTCTTGAGGTA TATTGCGGGTGGC TATCAT GTCACCTGCAATG TTTTTATGATTGGCC TERM 1678 1541279 - 1541306 + F 88 -9.9 -4.11322 | overlap 1541277 ACCTCTTGAGGTATA TTGCGGGTGGC TATCAT GTCACCTGCAA TGTTTTTATGATTGG YPDSF_1374 1541494 - 1541772 + | hypothetical protein rrmA 1542833 - 1541994 - | 23S rRNA methyltransferase A TERM 1679 1542876 - 1542862 - H 76 -7.8 -4.22858 | overlap 1542859 ATAACAGATAAATAA CCGCCA AGA TAGCGG GCAGATGCGGCGTTA YPDSF_1376 1543249 - 1544004 + | hypothetical protein TERM 1680 1544083 - 1544052 - T 86 -11.7 -3.34398 | opp_overlap 1544060 1544081, overlap 1544060 GGGTTTCCCCAAATA TGAAAAAACCCGC ACAAAG GCGGGTTTTTACA GCAAACGCTGATTAG TERM 1681 1544060 - 1544075 + T 78 -7.5 -4.56597 | opp_overlap 1544060 1544052 CCAAATATGAAAAAA CCCGC ACAAAG GCGGG TTTTTACAGCAAACG TERM 1682 1544075 - 1544060 - T 91 -7.5 -5.32699 | opp_overlap 1544060, overlap 1544052 CCAAATATGAAAAAA CCCGC ACAAAG GCGGG TTTTTACAGCAAACG YPDSF_1377 1544304 - 1544095 - | cold shock-like protein CspC YPDSF_1378 1545465 - 1546064 + | palmitoyl transferase for Lipid A TERM 1683 1546135 - 1546099 - T 89 -6.8 -5.28481 | opp_overlap 1546101, overlap 1546101 TATTTAACTAAAAAA CAGCATATAACCAT AATATTAAA ATGGTTATATGCTT GGTTGAGGGCGAATT TERM 1684 1546133 - 1546101 - T 88 -9.4 -4.26777 | opp_overlap 1546101, overlap 1546099 TTTAACTAAAAAACA GCATATAACCAT AATATTAAA ATGGTTATATGC TTGGTTGAGGGCGAA TERM 1685 1546101 - 1546133 + T 74 -9.4 -3.33696 | opp_overlap 1546101 1546099 TTTAACTAAAAAACA GCATATAACCAT AATATTAAA ATGGTTATATGC TTGGTTGAGGGCGAA YPDSF_1379 1547742 - 1546369 - | aromatic amino acid transport protein YPDSF_1380 1548290 - 1547979 - | hypothetical protein YPDSF_1381 1548632 - 1548333 - | hypothetical protein TERM 1686 1548883 - 1548854 - R 95 -12.9 -3.10071 | opp_overlap 1548852 1548847, overlap 1548844 AAATTGCAGGTAACA TGCTGACACTGCC TGTT GGTAGTGCCAGCA TCGGGACACGTTTAT YPDSF_1382 1549170 - 1548895 - | hypothetical protein YPDSF_1383 1549788 - 1550021 + | hypothetical protein YPDSF_1384 1550351 - 1550112 - | hypothetical protein TERM 1687 1550638 - 1550628 - H 87 -5.4 -5.42259 | GCATCTTTAAAAAAA TGGT TAC ACCA ACAACCGCTATCAGA TERM 1688 1550800 - 1550774 - H 71 -6.6 -4.14243 | opp_overlap 1550774 TATGGCACTTGAAAA CTCTTTTGCCAA ACC TCGGCCAAAAAG TCTTTACCGCACATT TERM 1689 1550976 - 1550962 - g 70 -9.2 -3.56594 | opp_overlap 1550962, overlap 1550952 GTAAATGGGTCGAAA CCCACC TAG GGCGGG TCATCTATCTTGAAG YPDSF_1385 1550907 - 1551293 + | AraC family transcription regulator YPDSF_1386 1551539 - 1551375 - | hypothetical protein YPDSF_1387 1552195 - 1553913 + | ABC transporter ATP-binding protein TERM 1690 1553952 - 1553928 - T 93 -9.9 -4.26202 | opp_overlap 1553931, overlap 1553930 1553931 ATACTCAGTAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCATATGCGCCTAT TERM 1691 1553950 - 1553930 - T 100 -12.5 -3.72775 | opp_overlap 1553931, overlap 1553928 1553931 ACTCAGTAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 1692 1553949 - 1553931 - T 100 -16 -2.82942 | opp_overlap 1553931, overlap 1553930 1553928 CTCAGTAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 1693 1553931 - 1553949 + T 100 -16 -4.8048 | opp_overlap 1553931 1553930 1553928 CTCAGTAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC YPDSF_1388 1554488 - 1554030 - | transposase for the IS1541 insertion element TERM 1694 1554601 - 1554619 + H 100 -16 -4.36914 | opp_overlap 1554601 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 1695 1554619 - 1554601 - H 100 -16 -3.07307 | opp_overlap 1554601 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA YPDSF_1389 1554726 - 1555577 + | hypothetical protein TERM 1696 1555644 - 1555630 - f 75 -5.6 -4.71318 | AAGATCAAAAAACAA CCTCTG GAG CAGCGG CCTTCCCTGCTCCTC YPDSF_1390 1555814 - 1556098 + | hypothetical protein TERM 1697 1556144 - 1556125 - f 76 -9.3 -3.49858 | opp_overlap 1556119, overlap 1556117 TCAAGCACACCATAA GCCATGG TGAATG CCATGGC TGCTGATAAGTTCAG TERM 1698 1556539 - 1556518 - g 76 -5.8 -4.62772 | overlap 1556519 TGGAAAGCAAATAAA CCGCAAGC GGAGAT GCTTGCGC AATGGCATGAGGCAC YPDSF_1391 1556488 - 1557300 + | hypothetical protein TERM 1699 1557593 - 1557560 - T 71 -9.7 -2.66748 | opp_overlap 1557565, overlap 1557565 GAGGAGCCAAATTTA GAAAATCCCGTTTAG GAAA CTAAGCGGGATTTTT GCTTTTCTATCACTG TERM 1700 1557588 - 1557565 - T 95 -9.6 -4.51196 | opp_overlap 1557565, overlap 1557560 GCCAAATTTAGAAAA TCCCGTTTAG GAAA CTAAGCGGGA TTTTTGCTTTTCTAT TERM 1701 1557565 - 1557588 + T 100 -11.8 -5.15526 | opp_overlap 1557565 1557560 GCCAAATTTAGAAAA TCCCGTTTAG GAAA CTAAGCGGGA TTTTTGCTTTTCTAT YPDSF_1392 1558717 - 1557701 - | hypothetical protein TERM 1702 1558053 - 1558063 + g 70 -4.6 -4.59773 | TAACCGCCAGGACGA GTGG GAT CCGC TTTTTGCAGATACCC TERM 1703 1558506 - 1558490 - G 76 -5.9 -4.60487 | TATCATTTCCAAAAA TGTCGAA TTA TTCAACA CTCGTGGACGTGATG TERM 1704 1558929 - 1558893 - H 89 -12.6 -2.87881 | gap 1, opp_overlap 1558893 1558909, overlap 1558900 1558914 TAAGTTCGTCACACA TCCGAAACGTTT-AGAT TTAA ATCCGAAACGTTTCGGA TCTACTCTAATGCCG TERM 1705 1558893 - 1558929 + H 75 -10.4 -2.87468 | gap 1, opp_overlap 1558893 1558900 1558914, overlap 1558909 TAAGTTCGTCACACA TCCGAAACGTTTAG-AT TTAA ATCCGAAACGTTTCGGA TCTACTCTAATGCCG TERM 1706 1558929 - 1558914 - H 70 -7.6 -3.7108 | opp_overlap 1558893 1558909, overlap 1558900 1558893 ACGTTTAGATTTAAA TCCGAA ACGT TTCGGA TCTACTCTAATGCCG lacY 1559072 - 1560379 + | galactoside permease YPDSF_1394 1560457 - 1562583 + | alpha-galactosidase TERM 1707 1562589 - 1562608 + T 95 -12.8 -2.94322 | opp_overlap 1562585, overlap 1562586 CGTAAATTAACCTCA GGCCGCCG TTTA TGGCGGCC TACTTTGCGTCCAAT YPDSF_1395 1562980 - 1562831 - | hypothetical protein YPDSF_1396 1563710 - 1562970 - | phosphopantetheinyl transferase YPDSF_1397 1564233 - 1565225 + | C4-dicarboxylate transporter, periplasmic protein TERM 1708 1565236 - 1565262 + F 75 -10.3 -2.73875 | overlap 1565233 AATAACATCCATCCG GCGGTATTGAA TTATT TTTAATACCGC TGATATTACCCAACG TERM 1709 1565516 - 1565528 + G 74 -7.7 -4.15044 | CGCTATTTTATGTAT GGTGA CGT TCACC TTTATTGGCGCAGCG YPDSF_1398 1565349 - 1565855 + | C4-dicarboxylate transporter, small subunit YPDSF_1399 1565875 - 1567167 + | C4-dicarboxylate transporter, large subunit YPDSF_1400 1567425 - 1568054 + | GerR-family transcriptional regulatory protein TERM 1710 1568106 - 1568164 + T 100 -16.3 -2.81072 | opp_overlap 1568105 1568108 1568121, overlap 1568108 1568121 TGAAGTCGGGCAAAC CATTTGCGGCCTAAATACCG-CTTGCCGA TAG TTGGCAAGACGGTATTTAGGC-GCTGAGG ATTCTGTTACCTCGC TERM 1711 1568108 - 1568165 + T 82 -10.2 -3.68988 | gap 3, opp_overlap 1568105 1568108 1568121, overlap 1568106 1568121 AAGTCGGGCAAACCA TTTGC-G-GCCTAAATACCG-CTTGCCGA TAG TTGGCAAGACGGTATTTAGGCGCTGAGGA TTCTGTTACCTCGCC TERM 1712 1568162 - 1568108 - T 95 -13.1 -2.90992 | opp_overlap 1568106 1568108 1568121, overlap 1568105 1568121 AAGTCGGGCAAACCA TTTGCGGCCTAAATACCG-CTTGCCGA TAG TTGGCAAGACGGTATTTAGG-CGCTGA GGATTCTGTTACCTC TERM 1713 1568121 - 1568150 + T 100 -12.3 -3.55444 | gap 1, opp_overlap 1568108 1568105 1568121, overlap 1568106 1568108 CATTTGCGGCCTAAA TACCG-CTTGCCGA TAG TTGGCAAGACGGTA TTTAGGCGCTGAGGA TERM 1714 1568150 - 1568121 - T 78 -10.1 -3.53224 | gap 1, opp_overlap 1568121 1568106 1568108, overlap 1568108 1568105 CATTTGCGGCCTAAA TACCG-CTTGCCGA TAG TTGGCAAGACGGTA TTTAGGCGCTGAGGA TERM 1715 1568609 - 1568586 - T 100 -13.2 -4.15998 | opp_overlap 1568586 AGCCAAATTAAAGAA CCCTGCCTAG GTAA CTAAGCAGGG TTTTTGCATTTCAGT TERM 1716 1568586 - 1568609 + T 100 -11 -4.81851 | opp_overlap 1568586 AGCCAAATTAAAGAA CCCTGCCTAG GTAA CTAAGCAGGG TTTTTGCATTTCAGT TERM 1717 1568854 - 1568818 - T 79 -6.8 -4.66537 | gap 1, opp_overlap 1568824 1568830 1568830, overlap 1568820 TGGCTGAACATAAAA TCTTA-ATGAAAAGCCC TGAG GGACTTTTCATCTATGA GTATTTGTAAAGATT YPDSF_1401 1569460 - 1568921 - | hypothetical protein TERM 1718 1569307 - 1569319 + g 91 -3.3 -5.83211 | TTAGCTGTTTATCAC GCTCA AGT TGTGC TTTTTTATTTTCCTC TERM 1719 1569351 - 1569370 + g 90 -8.6 -5.06103 | ACAGCCTCTCTTGCC TCACGAGT CTGA GCTCGTGA TTTTTTAGCCGTTCT YPDSF_1402 1570245 - 1569550 - | hypothetical protein TERM 1720 1571054 - 1571044 - g 76 -8.2 -4.21141 | CCTGAACAAATGAAA GCGG TAG CCGC GGCTGGACACGAAGT YPDSF_1403 1570822 - 1571703 + | polysaccharide deacetylase TERM 1721 1571789 - 1571758 - g 86 -3 -5.65177 | gap 1, overlap 1571761 1571762 ACATCTATAAAAAAA TATCTGCTGATGGCT GGC AGCCG-CAGCAATTA ACAATCAAAGATGTC YPDSF_1404 1571739 - 1573079 + | sugar transporter YPDSF_1405 1574537 - 1573107 - | hypothetical protein TERM 1722 1574301 - 1574290 - G 85 -3.6 -5.47821 | ACGGAGGCAAAAAAA GCCG CAAT CAGC ATATTGAAACTGTCG YPDSF_1406 1574831 - 1576198 + | argininosuccinate synthase TERM 1723 1576277 - 1576306 + T 83 -10.7 -3.4678 | overlap 1576278 CTGCGCGACCCCAAG CGGTTAAGGGGAG CTTC CCCCCCTTAACCC TTCTCGTGTCACAGT TERM 1724 1576278 - 1576305 + T 95 -14.2 -2.67747 | overlap 1576277 TGCGCGACCCCAAGC GGTTAAGGGGAG CTTC CCCCCCTTAACC CTTCTCGTGTCACAG lldD 1577548 - 1576403 - | L-lactate dehydrogenase TERM 1725 1577344 - 1577332 - G 70 -9.1 -3.50853 | CTGGCCCAAGGACAA CAGGC ATT GCCTG CGTCTCGCCGAAAAG YPDSF_1408 1579122 - 1577845 - | racemase YPDSF_1409 1579996 - 1579154 - | hydrolase YPDSF_1410 1580784 - 1580044 - | oxidoreductase YPDSF_1411 1581212 - 1581634 + | hypothetical protein YPDSF_1412 1582947 - 1581643 - | transmembrane transporter TERM 1726 1582362 - 1582351 - G 70 -2.2 -4.92314 | ATCAAGGTAGAAAAA GGCA AAAA TACC TAACCCCACGGCGGG YPDSF_1413 1583109 - 1583303 + | hypothetical protein TERM 1727 1583421 - 1583431 + F 73 -5.4 -4.65168 | opp_overlap 1583421, overlap 1583428 TGTTTTCAGAATAAT GTCA GAT TGAC TTTTTAAAATGTCAT TERM 1728 1583428 - 1583445 + F 76 -2.7 -5.38054 | opp_overlap 1583421, overlap 1583421 AGAATAATGTCAGAT TGACTTT TTAA AATGTCA TTTTTATTTATAAAA TERM 1729 1585120 - 1585107 - g 71 -6.7 -4.21773 | CGGCAAGACAAACAA TGCCA TTAG TGGCA AATGCCACAGCACAA TERM 1730 1587113 - 1587092 - g 77 -10.1 -3.74693 | TGCCACCGTATTAAA GGTGATCGC TCAG GCGGTCACC GAACTCGATAATAAA YPDSF_1414 1583972 - 1587124 + | hypothetical protein YPDSF_1415 1588295 - 1587087 - | transposase for the IS285 insertion element TERM 1731 1588609 - 1588587 - R 100 -11.3 -5.16841 | opp_overlap 1588585 GCACACCAATAAAAA GGGCTGACA ATAGA TGCCAGCCC CACTCTCTTTCCCCT YPDSF_1416 1588983 - 1588666 - | hypothetical protein YPDSF_1417 1590526 - 1589417 - | hypothetical protein sbcB 1590819 - 1592249 + | exonuclease I TERM 1732 1592368 - 1592379 + T 71 -4.4 -4.84761 | TGCCTGTGCGGCAGT GAAC TTAA GTTC TTTTTGTCAGCATCT TERM 1733 1593074 - 1593051 - T 100 -11.8 -5.47159 | gap 1, opp_overlap 1593051 TCTGAATACAAAAAA TCCGGCAACAG AGA CTGT-GCCGGA TTGATAAACTTAATG TERM 1734 1593051 - 1593074 + T 86 -11.8 -3.19157 | gap 1, opp_overlap 1593051 TCTGAATACAAAAAA TCCGGCAACAG AGA CTGT-GCCGGA TTGATAAACTTAATG YPDSF_1419 1594498 - 1593107 - | amino acid permease TERM 1735 1594661 - 1594646 - R 74 -10.4 -2.57132 | overlap 1594645 CTGCTGCGCCATAAT CGCTGC ATGT GCAGCG CATACCGGTGGGCAC TERM 1736 1594847 - 1594822 - R 100 -7.6 -5.86332 | opp_overlap 1594822 1594825 CGAATGCAAAAAAAA TAACCGACGC GTTTAA ACGTCGGCTA TTTCATTCGGCGTAT YPDSF_1420 1596048 - 1594957 - | hypothetical protein TERM 1737 1597644 - 1597623 - g 70 -2.9 -4.81083 | overlap 1597625 GGGAATCAGCAAAAA GTGGCCATT GGTA AATGGCTGC GCGGTGATGCACAGG YPDSF_1423 1597122 - 1597907 + | ATPase YPDSF_1424 1597904 - 1598899 + | ribose transport system, permease protein YPDSF_1425 1599144 - 1599578 + | hypothetical protein YPDSF_1426 1600560 - 1599733 - | hypothetical protein TERM 1738 1601092 - 1601043 - H 78 -10.1 -3.48395 | gap 1, opp_overlap 1601054, overlap 1601054 AGGTGGCGTAGAGAA CGCAGT-AGAGAGCCCTCGGAAGA TAA TCTTCCGAGGGCTTTTTTATTGCT CATCATTTTATAGAC TERM 1739 1601080 - 1601054 - H 100 -21 -2.96538 | opp_overlap 1601054, overlap 1601043 AGAACGCAGTAGAGA GCCCTCGGAAGA TAA TCTTCCGAGGGC TTTTTTATTGCTCAT TERM 1740 1601054 - 1601080 + H 100 -21 -5.52023 | opp_overlap 1601054 1601043 AGAACGCAGTAGAGA GCCCTCGGAAGA TAA TCTTCCGAGGGC TTTTTTATTGCTCAT TERM 1741 1602129 - 1602111 - g 73 -10.2 -3.33711 | opp_overlap 1602110 1602108 1602111 1602122 CATGGAGAAATTGAA GGCGCTGG GTG CCAGCTCC ATTCTGGTATTACCG hisG 1601266 - 1602165 + | ATP phosphoribosyltransferase TERM 1742 1602246 - 1602232 - g 70 -2.1 -4.93316 | gap 1, overlap 1602223 GAAGAACAGCAAAAA GC-GCT GTTG AGCCGC CCAGCCATCAATGCA hisD 1602169 - 1603500 + | histidinol dehydrogenase YPDSF_1429 1603503 - 1604651 + | histidinol-phosphate aminotransferase YPDSF_1430 1604648 - 1605715 + | imidazole glycerol-phosphate dehydratase/histidinol phosphatase hisH 1605715 - 1606305 + | imidazole glycerol phosphate synthase subunit HisH TERM 1743 1606496 - 1606476 - g 73 -9 -3.65902 | opp_overlap 1606486 CTGACCGGAGCCAAA GATCCGGC CGCTC GCCAGATC CCACTACTGCGCGAG YPDSF_1432 1606311 - 1607048 + | 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase TERM 1744 1607501 - 1607489 - g 73 -9.1 -3.77206 | GAGAAGCGTACCAAA GCCAC CAC GTGGC AAACCGAAGATTGGG YPDSF_1433 1607030 - 1607806 + | imidazole glycerol phosphate synthase subunit HisF YPDSF_1434 1607800 - 1608414 + | bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein TERM 1745 1608467 - 1608443 - T 100 -10 -5.42259 | opp_overlap 1608443 TCACTGGCAAAAAAA CGCCTCCAAC TTATC ACTGGAGGCG TTTTTATTGGGCAGC TERM 1746 1608443 - 1608467 + T 100 -8.6 -5.06414 | opp_overlap 1608443 TCACTGGCAAAAAAA CGCCTCCA ACTTATCAC TGGAGGCG TTTTTATTGGGCAGC YPDSF_1435 1610023 - 1608614 - | 6-phosphogluconate dehydrogenase TERM 1747 1610330 - 1610315 - R 89 -10.4 -4.01603 | overlap 1610308 1610325 TAGGCAAAGAGCAAA GCGCCA CAAA TGGCGC GGCCTAAACTGCCAA YPDSF_1436 1611302 - 1610409 - | UTP-glucose-1-phosphate uridylyltransferase YPDSF_1437 1612276 - 1611386 - | UTP-glucose-1-phosphate uridylyltransferase TERM 1748 1611583 - 1611594 + g 71 -5.8 -4.36914 | overlap 1611578 GAATTTCATCCCCCG CACC ACGT GGTG TTTTCTCAAGCAACG TERM 1749 1613695 - 1613708 + G 74 -4.5 -4.83615 | gap 1 AGAAACAGCGATGAG CGAGGG CCA CCC-CG TTTTTATCGCGAATA YPDSF_1438 1613222 - 1615036 + | siderophore biosynthetic enzyme TERM 1750 1615286 - 1615269 - g 89 -2.5 -5.70829 | opp_overlap 1615270, overlap 1615270 1615272 AATACTAGAAAAAAA TCACGGC AAAA GCCGAGT GCGTTTTAACTGCAC TERM 1751 1616046 - 1616034 - g 73 -3.3 -5.01811 | opp_overlap 1616035, overlap 1616027 1616035 TGATCAAAGTAAAAA CCCGT TTT ACGGT ATCTTGGAGATAGAT TERM 1752 1616208 - 1616175 - g 80 -13.9 -3.00946 | overlap 1616153 1616172 TGGGCGGACAAATTA TGCCCAATCCGCCAC CACC GCATCGGATTGGGCA TCCGCCGAAACCCGA YPDSF_1439 1615249 - 1617510 + | iron-siderophore receptor TERM 1753 1617533 - 1617554 + F 71 -8.7 -3.39908 | overlap 1617531 AGTTGGATACCCTCA CAGCCGG CCACTTTT CCGGCTG TATCTTTTGCCAACG YPDSF_1440 1617600 - 1618679 + | iron-siderophore transport system, periplasmic binding protein TERM 1754 1619136 - 1619148 + G 75 -9.1 -3.84246 | opp_overlap 1619134 1619136 GCGGGCAACGGAATA CGCAC TCG GTGCG TTTGGTGCTTACCGG TERM 1755 1619440 - 1619478 + G 70 -2.9 -4.75472 | gap 1, overlap 1619441 1619442 1619443 AGTAGGCGCAACATT GCTGGCCGCTACCGCGAC GGCA GTAGCGGGTCCGGTC-GC TTTTATTGGTCTGGC YPDSF_1441 1618676 - 1619716 + | iron-siderophore transport system, transmembrane component YPDSF_1442 1619703 - 1620743 + | iron-siderophore transport system, membrane permease component YPDSF_1443 1620740 - 1621588 + | iron-siderophore transport system, ATP-binding component YPDSF_1444 1623541 - 1621697 - | siderophore biosynthetic enzyme TERM 1756 1621780 - 1621793 + g 72 -8.1 -3.96469 | opp_overlap 1621779 1621780 CAGGGTCAGCTAAAT CCAGC ATGT GCTGG TTATTGTTGAGCTGT YPDSF_1445 1624116 - 1623538 - | siderophore biosynthetic enzyme YPDSF_1446 1625414 - 1624116 - | siderophore biosynthetic enzyme TERM 1757 1624147 - 1624164 + g 70 -2.7 -4.87665 | opp_overlap 1624149, overlap 1624129 1624149 AGTGATGGCGCACTG AATTGCT GAAA AGCAATG TTTTTCTCAATCGGA YPDSF_1447 1626996 - 1625449 - | decarboxylase TERM 1758 1625811 - 1625792 - G 74 -7.9 -4.14874 | ATAACATGTTCAAAA GCCAAAC CAAGCT GTTTGGC TCCCATAATCCGTAG TERM 1759 1626512 - 1626533 + g 74 -6.5 -4.37886 | overlap 1626514 CTGGTGAAAATACCG TCGCCCTGG CTAC CTAGGGCCA TTTTATCGCGGGTCC TERM 1760 1627147 - 1627119 - R 72 -7.5 -3.9751 | opp_overlap 1627123 AAATAAAGAATACAA CCAAGTTTCTG TCTAATG CAGGAACTTGG CTAACTAATAAGATT YPDSF_1448 1627927 - 1627148 - | ferric iron reductase involved in ferric hydroximate transport TERM 1761 1628277 - 1628299 + H 72 -7.1 -3.91716 | gap 1 TGGATTGATTTTTTT GTG-ATCGAC TCTG GTCGATGCAC TTCTTTAACAAATGG YPDSF_1449 1628369 - 1629955 + | membrane protein TERM 1762 1630044 - 1630009 - T 100 -8.3 -4.85782 | gap 1, opp_overlap 1630010 1630010 1630013, overlap 1630010 1630013 GCCTGGAAAAATAAA TGATTAGGCCCGGTGG AGAAA CCATCGGGCCTA-TCT CTTTCCACTACCTAT TERM 1763 1630043 - 1630010 - T 91 -11.8 -3.50746 | gap 1, opp_overlap 1630010 1630010 1630013, overlap 1630009 1630013 CCTGGAAAAATAAAT GATTAGGCCCGGTGG AGAAA CCATCGGGCCTA-TC TCTTTCCACTACCTA TERM 1764 1630010 - 1630045 + T 82 -10.5 -3.61922 | gap 1, opp_overlap 1630009 1630010 1630013, overlap 1630010 1630013 CCTGGAAAAATAAAT GA-TTAGGCCCGGTGG AGAAA CCATCGGGCCTATCTC TTTCCACTACCTATT TERM 1765 1630010 - 1630043 + T 100 -14 -3.38522 | gap 1, opp_overlap 1630010 1630009 1630013, overlap 1630010 1630013 CCTGGAAAAATAAAT GATTAGGCCCGGTGG AGAAA CCATCGGGCCTA-TC TCTTTCCACTACCTA TERM 1766 1630013 - 1630041 + T 100 -16.8 -3.26031 | opp_overlap 1630010 1630009 1630013, overlap 1630010 1630010 GGAAAAATAAATGAT TAGGCCCGGTGG AGAAA CCATCGGGCCTA TCTCTTTCCACTACC TERM 1767 1630041 - 1630013 - T 100 -14.6 -2.57916 | opp_overlap 1630013 1630010 1630010, overlap 1630010 1630009 GGAAAAATAAATGAT TAGGCCCGGTGG AGAAA CCATCGGGCCTA TCTCTTTCCACTACC YPDSF_1450 1631956 - 1630100 - | putative assembly protein TERM 1768 1630128 - 1630142 + g 72 -3.5 -4.79174 | AGTGACTTTTTCAGA TCGTC CACAC GGCGA TTTTGTTGGTTACGT TERM 1769 1631817 - 1631831 + g 76 -4.2 -4.99638 | overlap 1631819 TCACCCTCCAACTGC AAGTGG TAA CCACTC TTTTTCTCTACCTGT TERM 1770 1632028 - 1632001 - R 71 -4.8 -4.63592 | TCTCAATAAAAAGAA TGACTAGTCCAG ACTG CTGACCAAGTCA AATGAAGGGAAAGCG dcd 1632724 - 1632143 - | deoxycytidine triphosphate deaminase YPDSF_1452 1633470 - 1632829 - | uridine kinase TERM 1771 1633138 - 1633154 + g 74 -2.2 -5.0666 | overlap 1633139 AATGATCACTTTTTT AGGTTC TAAAT GAACCG TTTCTTTTTTACGTG TERM 1772 1633643 - 1633681 + r 86 -11.8 -3.07344 | opp_overlap 1633657 CTATTTAAGCCGATC TTGAGCCGGAAGCATCAT TGA ATGACCTTTCCGGCTCAG TGTGTTACGCGCTCA YPDSF_1453 1634827 - 1633715 - | putative ATPase metG 1635092 - 1637119 + | methionyl-tRNA synthetase TERM 1773 1637209 - 1637177 - T 100 -11.3 -4.43208 | opp_overlap 1637184, overlap 1637181 1637183 1637184 AGATCCTTAAAGAAA TAAATATCCTCCGGC ATA GCCGGAGGTTTTTCA TATGCGCCTATAAGG TERM 1774 1637205 - 1637181 - T 100 -9.9 -4.78326 | opp_overlap 1637184, overlap 1637177 1637183 1637184 CCTTAAAGAAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCATATGCGCCTAT TERM 1775 1637203 - 1637183 - T 100 -12.5 -3.99693 | opp_overlap 1637184, overlap 1637181 1637177 1637184 TTAAAGAAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 1776 1637184 - 1637202 + T 100 -16 -4.8048 | opp_overlap 1637183 1637181 1637177 1637184 TAAAGAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 1777 1637202 - 1637184 - T 100 -16 -2.98189 | opp_overlap 1637184, overlap 1637183 1637181 1637177 TAAAGAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC YPDSF_1455 1637741 - 1637283 - | transposase for the IS1541 insertion element TERM 1778 1637872 - 1637854 - R 100 -16 -3.07307 | opp_overlap 1637854 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAC TERM 1779 1637854 - 1637872 + r 100 -16 -4.36914 | opp_overlap 1637854 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAC TERM 1780 1637923 - 1637887 - R 71 -8.8 -3.28712 | gap 1, opp_overlap 1637892, overlap 1637892 GTTTTCTGGGCACAA CAAAATGCCGGTCTGGG GTAA CCCT-ACCGGCATTTTT ATGATTGAAACCCGT TERM 1781 1637918 - 1637892 - R 100 -8.7 -4.77165 | gap 1, opp_overlap 1637892, overlap 1637887 CTGGGCACAACAAAA TGCCGGTCTGGG GTAA CCCT-ACCGGCA TTTTTATGATTGAAA TERM 1782 1637892 - 1637918 + r 100 -8.7 -4.98255 | gap 1, opp_overlap 1637887 1637892 CTGGGCACAACAAAA TGCCGGTCTGGG GTAA CCCT-ACCGGCA TTTTTATGATTGAAA YPDSF_1456 1638621 - 1637959 - | membrane protein TERM 1783 1638252 - 1638238 - G 72 -3.6 -4.84274 | TAACGACATCAAAAA GATAAT CGC ATCATC TAGATCAAACCACAC TERM 1784 1638687 - 1638677 - H 86 -3.2 -5.61689 | AAAATTAATAAAAAA TCAC TGC GCGA TATATAAAAATAGGC YPDSF_1457 1639319 - 1640395 + | sugar ABC transporter TERM 1785 1640447 - 1640467 + G 74 -11.1 -3.15544 | opp_overlap 1640448 1640450, overlap 1640450 TGCCGATACCTGAAT ACAGCCGCA ATA TGCGGCTGA TTGGTCACAGTGACC TERM 1786 1640466 - 1640448 - g 86 -14.6 -3.07962 | opp_overlap 1640447 1640450, overlap 1640450 GCCGATACCTGAATA CAGCCGCA ATA TGCGGCTG ATTGGTCACAGTGAC TERM 1787 1640450 - 1640464 + G 71 -11.4 -2.78216 | opp_overlap 1640450 1640448, overlap 1640447 CGATACCTGAATACA GCCGCA ATA TGCGGC TGATTGGTCACAGTG TERM 1788 1640464 - 1640450 - g 74 -11.4 -3.09785 | opp_overlap 1640447 1640450, overlap 1640448 CGATACCTGAATACA GCCGCA ATA TGCGGC TGATTGGTCACAGTG TERM 1789 1640606 - 1640592 - g 90 -9.2 -4.63184 | opp_overlap 1640592 AAGGGATGCCAAAAA CCCGCG TCC CGCAGG TTTCATCGCTGCGCC YPDSF_1458 1640413 - 1641666 + | hypothetical protein TERM 1790 1641843 - 1641816 - f 93 -9.8 -4.39226 | opp_overlap 1641818, overlap 1641813 1641818 ATAACTAGAAAATAA TAGCAGATCGGC TCTG GCCGAACTGCTT CCTGCAAAAATTTTC TERM 1791 1641841 - 1641818 - f 100 -12.4 -3.78091 | opp_overlap 1641818, overlap 1641816 1641813 AACTAGAAAATAATA GCAGATCGGC TCTG GCCGAACTGC TTCCTGCAAAAATTT TERM 1792 1641818 - 1641841 + F 93 -12.4 -3.1506 | opp_overlap 1641816 1641813 1641818 AACTAGAAAATAATA GCAGATCGGC TCTG GCCGAACTGC TTCCTGCAAAAATTT TERM 1793 1642022 - 1641996 - f 71 -2.2 -5.16681 | opp_overlap 1642019, overlap 1642001 CTAAAAATAAGAAAA TACATGCAAAGA TTC TCATCGCGCGTA ACCAATCTGCTGATT TERM 1794 1642921 - 1642932 + G 73 -5.8 -4.5442 | TTCCGTTATGGATGC TGGC AATG GCCA TTTTCTCATTGGGCG YPDSF_1459 1641999 - 1643180 + | multidrug resistance protein TERM 1795 1643444 - 1643462 + G 70 -8.8 -3.6512 | ATATGATGTCACTTT GCTGGCAG TAC CTGCGAGC TTTCACCATTATTTA YPDSF_1460 1643422 - 1643829 + | hypothetical protein TERM 1796 1644263 - 1644279 + G 82 -7.3 -4.62904 | TGGTTTACCCGCTAT TAGCGCA GTT TGCGTTA TTTTTGCCGGTATTT YPDSF_1461 1643826 - 1644521 + | hypothetical protein TERM 1797 1644532 - 1644556 + F 71 -9.3 -2.98729 | overlap 1644555 GTTGAACCCACTTTC CCCTGGCGT GATAGCG ACGTCAGGG TCTGTAATCCTTATC YPDSF_1462 1644857 - 1645741 + | cytidine deaminase TERM 1798 1647188 - 1647172 - g 78 -2.2 -5.25803 | AATTGGTACAAAAAA GTGACG ACCTA CACCAC TGGAATCTGCACAAT YPDSF_1463 1646097 - 1647794 + | malate dehydrogenase TERM 1799 1647828 - 1647801 - f 73 -8.3 -3.65812 | overlap 1647802 TCGTTTTGAATATAA TCCGGCCTGTG CTATAC CGCAGGCCGGG TACTCAGATGCTATC TERM 1800 1647827 - 1647802 - f 83 -11.8 -2.79273 | overlap 1647801 CGTTTTGAATATAAT CCGGCCTGTG CTATAC CGCAGGCCGG GTACTCAGATGCTAT TERM 1801 1647909 - 1647898 - f 71 -3 -5.06816 | AGCGTTGAACAAAAA GTTA CTTG TAAC CCCAAAGCACATGCG TERM 1802 1648665 - 1648677 + G 71 -6.9 -4.26871 | CCTCTATATTCTTAA GCGGG AAC CTCGC TTTCTTGGTCCATTG YPDSF_1464 1648075 - 1648812 + | hypothetical protein TERM 1803 1649075 - 1649101 + T 100 -13.1 -4.68846 | gap 1, opp_overlap 1649070 TTGTCATTAACTTCA GCCAGT-AGGGC TATC GCCCTGACTGGC TTTTACTTTATTCCT YPDSF_1465 1649478 - 1649257 - | ABC galactoside transporter, permease subunit mglC TERM 1804 1649509 - 1649527 + H 100 -13.2 -4.01078 | CCAGGGGGTAATCTG CTCTCCTG ATT CAGGAGAG TTTATGGTCACTTTT YPDSF_1466 1649531 - 1650553 + | transposase TERM 1805 1650634 - 1650620 - g 77 -11.4 -3.3506 | overlap 1650611 TGGAAAGCCTTATAA GCGCAG CGC CTGCGC TGTCACAACAGGCAG YPDSF_1467 1650553 - 1651332 + | transposase/IS protein YPDSF_1468 1652226 - 1651342 - | galactoside permease YPDSF_1469 1653761 - 1652247 - | galactose/methyl galaxtoside transporter ATP-binding protein TERM 1806 1653438 - 1653409 - G 86 -2.8 -5.64274 | opp_overlap 1653409 1653411 1653429, overlap 1653411 TGATCGACAAAAAAA CCTTTGGTTGGA TAGCGC CCCAACCACATG TTGTCCATTACTGTA TERM 1807 1653500 - 1653520 + g 74 -6.9 -4.30448 | overlap 1653513 CCATCGAAACACCCT GTTCTAATG CTT CTTTAGAAC TTTTAAATTCAATTT YPDSF_1470 1654983 - 1653991 - | galactose-binding protein TERM 1808 1654027 - 1654049 + g 76 -3.4 -5.14698 | opp_overlap 1654028, overlap 1654028 ATTATCTTTATCAAC ACCTACGTAT GGA ATACGTACGA TTTTGTTTTCAATTT YPDSF_1471 1656897 - 1655731 - | hypothetical protein TERM 1809 1656119 - 1656107 - G 80 -4.7 -5.14965 | overlap 1656108 ACTTGTAGCAAAAAA CCCGC CCA GCGGT AATCCCAACCGACAT TERM 1810 1656118 - 1656108 - G 70 -8.2 -3.68256 | overlap 1656107 CTTGTAGCAAAAAAC CCGC CCA GCGG TAATCCCAACCGACA TERM 1811 1656497 - 1656483 - G 70 -10 -3.30418 | overlap 1656481 1656479 CACCGATCAAATAGA GTACCG CGC CGGTAC GTAATAAGCTGGCTG folE 1657656 - 1656952 - | GTP cyclohydrolase I TERM 1812 1657676 - 1657704 + r 93 -13.3 -2.84 | opp_overlap 1657653, overlap 1657673 CGGGTCACACCCGAA TTTCGCTCTCACT CTA ATTGAGAGCGAAA TGATTATCCAGTGAT YPDSF_1473 1658949 - 1657798 - | hypothetical protein TERM 1813 1658574 - 1658534 - G 79 -11.7 -3.19824 | overlap 1658532 1658554 1658556 1658557 CCACTAATGAATATA CCGGCACCCGGCCCGGC AAATACG GCCGCACTGAGCGCCGG ACGGCCAAAATGTGC YPDSF_1474 1659085 - 1659954 + | LysR family transcriptional regulator TERM 1814 1660341 - 1660351 + G 72 -8.2 -3.87815 | overlap 1660349 GTTAGTGCGGATTGT CGCC AGT GGCG TTTGTCACACTGACG YPDSF_1475 1660228 - 1661367 + | alcohol dehydrogenase TERM 1815 1661427 - 1661473 + G 75 -10.9 -3.47345 | gap 1, opp_overlap 1661444, overlap 1661427 1661430 GAAGAGCATCGGATG TTT-GGCTGCTGGCAACAGCGC TACC GCCATGCTGCCAGCAGCCTGAA TTGTCATATGACCTT TERM 1816 1661427 - 1661472 + G 76 -12.5 -2.67925 | opp_overlap 1661444, overlap 1661427 1661430 GAAGAGCATCGGATG TTTGGCTGCTGGCAACAGCGC TACC GCCATGCTGCCAGCAGCCTGA ATTGTCATATGACCT TERM 1817 1661430 - 1661469 + G 91 -16.4 -2.6252 | opp_overlap 1661444, overlap 1661427 1661427 GAGCATCGGATGTTT GGCTGCTGGCAACAGCGC TACC GCCATGCTGCCAGCAGCC TGAATTGTCATATGA YPDSF_1476 1661388 - 1662230 + | esterase TERM 1818 1662270 - 1662283 + F 95 -8.1 -5.10461 | opp_overlap 1662266 CACATAAAACCCCAA GCCCT TTCG AGGGC TTTTTATTCGATAGA TERM 1819 1662660 - 1662642 - f 71 -4.6 -4.58698 | CGAAATTAAAAATAA TACCCTAC ACA GTAAGATA ACGGCATGGAGTTGG TERM 1820 1663053 - 1663043 - g 100 -5.4 -5.81622 | ACAAAATGAAAAAAA CATC AAA GATG TCGCCTACGCTTTAC TERM 1821 1663756 - 1663766 + G 73 -5.4 -4.72272 | CTAATTATCAATTAC TGAC AGA GTCA TTTTTCATCGCAACA TERM 1822 1664164 - 1664145 - g 76 -5.8 -4.72272 | TTTGGTTATGAAAAA GAAAATGT CGTG ACATTTCC ACTAAGCGATGAATT TERM 1823 1664443 - 1664429 - g 78 -5.8 -4.76041 | opp_overlap 1664429 TACACCCAGTAAAAA TGATAA TAC TTATCA TGCTATAGCGACAAA YPDSF_1477 1662783 - 1665143 + | hypothetical protein YPDSF_1478 1665145 - 1666407 + | hypothetical protein YPDSF_1479 1666409 - 1667077 + | ABC transporter ATP-binding protein YPDSF_1480 1667087 - 1668397 + | heme-binding protein TERM 1824 1668392 - 1668421 + F 72 -9.3 -3.11687 | opp_overlap 1668390 TATCTGGCAGATATT CGTTGAAGCCACA TCAT TATGGCGTCAACG TTGCCTCATGATTCA TERM 1825 1668557 - 1668545 - f 74 -6.3 -4.56775 | ATGTGTTGGTAAAAA CATTG TTG CAATG AAAGTTATATTGAAG TERM 1826 1668778 - 1668753 - f 100 -11.3 -4.34345 | TATATACGATGAAAA TGATACTGCTC GTAA AAGCAGTATCA AGCCATCTCATTTTT YPDSF_1481 1668932 - 1670206 + | molybdopterin biosynthesis protein MoeA YPDSF_1482 1670208 - 1670978 + | molybdopterin biosynthesis protein MoeB YPDSF_1483 1671696 - 1671043 - | hypothetical protein TERM 1827 1671880 - 1671898 + r 100 -8.8 -5.8187 | opp_overlap 1671880 GAAGACATAAAAAAA GCTGACGC ATA GCATCAGC TTTTTTTGTTAGGTC TERM 1828 1671898 - 1671880 - R 100 -11 -5.80248 | opp_overlap 1671880 GAAGACATAAAAAAA GCTGACGC ATA GCATCAGC TTTTTTTGTTAGGTC YPDSF_1484 1673687 - 1671924 - | ABC transporter ATP-binding protein TERM 1829 1673724 - 1673698 - H 73 -3.6 -5.02502 | GACATGACAGAAAAA TCGTGCCATCAA AGC TCGCAGACACGA CGTTTTACCTATATA TERM 1830 1674322 - 1674312 - g 82 -4 -5.28166 | overlap 1674321 GAAAATCAACAAAAA CATT ATA AATG CTGAGACCCAACATA TERM 1831 1674390 - 1674405 + G 76 -3.2 -5.18371 | AGAACGCTATAACGC CTCAAC AACA GCTGAG TTTTATTTTGTCGAA YPDSF_1485 1674202 - 1674825 + | hypothetical protein TERM 1832 1674884 - 1674933 + T 81 -10.8 -3.27923 | gap 1, opp_overlap 1674889, overlap 1674888 1674893 TGGTGTTAATACAGT TTAAAGGTCGCGCTC-CAGCAGG ATCAC CCCGCTGTGAGCGCTATCATTAA TTAATAATATTCAAA TERM 1833 1674928 - 1674889 - T 90 -11.4 -3.66883 | gap 1, opp_overlap 1674888 1674884 1674893 TTAATACAGTTTAAA GGTCGCGCTC-CAGCAGGA TCA CCCCGCTGTGAGCGCTATC ATTAATTAATAATAT TERM 1834 1674893 - 1674924 + T 93 -12.3 -2.97613 | gap 1, opp_overlap 1674889, overlap 1674888 1674884 TACAGTTTAAAGGTC GCGCTC-CAGCAGG ATCAC CCCGCTGTGAGCGC TATCATTAATTAATA YPDSF_1486 1676404 - 1675037 - | hypothetical protein TERM 1835 1675765 - 1675750 - G 79 -9 -4.19817 | GTGAGGCAGGTAAAA CCACCT GAAC AGGTGG CGGGGCCGGTTCGCT TERM 1836 1676298 - 1676314 + g 71 -5 -4.56702 | opp_overlap 1676293 1676290, overlap 1676300 CAATCAACATCCGGG CGGGCC GGGTG GGCCAG TTTATTTAATTCACC YPDSF_1487 1676881 - 1676429 - | hypothetical protein YPDSF_1488 1677462 - 1676881 - | hypothetical protein YPDSF_1489 1678522 - 1677437 - | hypothetical protein YPDSF_1490 1680249 - 1678486 - | hypothetical protein TERM 1837 1679544 - 1679567 + gr 83 -11.8 -2.82516 | gap 1, opp_overlap 1679542 1679537 1679546, overlap 1679546 GATAACCACTGAACG CACTGTCGGCC TTC GGCC-ACAGTG TATCCTGCTCCCCGA YPDSF_1491 1680940 - 1680470 - | hypothetical protein TERM 1838 1680599 - 1680583 - G 71 -6.5 -4.254 | overlap 1680574 TCAATACTGAACAAA CTCCAGA GGC TCTGGTG AGCATAAATGCTTGT YPDSF_1492 1681998 - 1680940 - | hypothetical protein YPDSF_1493 1683617 - 1682016 - | hypothetical protein TERM 1839 1682757 - 1682783 + g 70 -11.4 -2.54523 | TTGTACGCGATATTC CGGGCGCGGCGG TAC CAGCCGGGTCCG TCCGTTCACATCTAA TERM 1840 1682878 - 1682896 + g 74 -6.6 -4.371 | opp_overlap 1682848, overlap 1682864 1682848 1682891 CCCTGCGGCTGGTTG CGCAGGTA TTT TGCCAGCG TTTTGGTCTGATCGA YPDSF_1494 1687083 - 1683661 - | hypothetical protein TERM 1841 1684684 - 1684705 + g 74 -6.5 -4.42653 | overlap 1684687 CGTTTGCAGGCTCAG CGAGCTGTC CGAC GACAGCCTG TTTTGTGCATCGCCT TERM 1842 1685129 - 1685144 + g 76 -6 -4.61199 | overlap 1685128 CAGTCAATTTCTTCG CGGCGG GAGG CCACCG TTTTATCTATCGCCT TERM 1843 1685389 - 1685377 - G 71 -10.5 -3.14344 | opp_overlap 1685376 1685373 CACCTGGCTGATCAA CCCGG TAT CCGGG GTAATTTTCCAGTCC TERM 1844 1685546 - 1685585 + g 73 -5 -4.60487 | TCGGCTTTTTCCGGG CGGGCCATCATCAGATAA GCCT TTAACTGGTCATAGCCTG TTTTTGCCCGTGCTG TERM 1845 1685600 - 1685612 + g 70 -10.5 -3.01791 | GTTTTTGCCCGTGCT GCCCG TTG CGGGC TGTTGGCGGGCAGCT YPDSF_1495 1688312 - 1687080 - | hypothetical protein TERM 1846 1688152 - 1688135 - G 86 -9.1 -4.44915 | GAACCAGCCAGAAAA CCACCGG GATA CCGATGG CAAACCACCAGAACT YPDSF_1496 1689142 - 1689315 + | IS630 orf YPDSF_1497 1689424 - 1689744 + | transposase YPDSF_1498 1689875 - 1690012 + | transposase TERM 1847 1690711 - 1690725 + T 70 -3.6 -4.75518 | CAAAGAGTTTGGGGA CTTTAT ATT GTAAAG TTTTAATTTTATATA YPDSF_1499 1693303 - 1691120 - | hypothetical protein TERM 1848 1691674 - 1691658 - G 76 -2.9 -5.09426 | GTTAATTGCAAAAAA CCGCG CCCATAC CACGG GTAATACCAAATATT TERM 1849 1691816 - 1691796 - G 84 -2.5 -5.55664 | opp_overlap 1691796 1691800, overlap 1691799 1691800 GCATTACCAAAAAAA CAGGCCATT CGG AATGGTGTG TTGATTAAATATTTT TERM 1850 1693121 - 1693105 - G 91 -6.5 -5.09895 | overlap 1693107 1693108 GACGTACTGAAAAAA CAGTGCC GTC GGCAATG GCACGCACTTGCTCC YPDSF_1500 1693579 - 1693319 - | hypothetical protein YPDSF_1501 1694506 - 1693733 - | hypothetical protein YPDSF_1502 1696734 - 1694503 - | hypothetical protein YPDSF_1503 1699167 - 1696819 - | hypothetical protein YPDSF_1504 1701812 - 1699170 - | ATPase subunit of ATP-dependent protease TERM 1851 1701079 - 1701102 + g 71 -6 -4.40561 | overlap 1701075 GCGGTTTTCCCCACA CCCGGTTC ACCCACCA GAATCGGG TTGTTTTTACGGCGG TERM 1852 1701994 - 1701975 - RH 100 -9.2 -5.72118 | opp_overlap 1701973, overlap 1701976 AAAAAACACAAAAAA GCAGGCGG CGAA CCGCCTGA AGTTGATGACAACGT TERM 1853 1701993 - 1701976 - RH 100 -12.7 -3.9778 | opp_overlap 1701973, overlap 1701975 AAAAACACAAAAAAG CAGGCGG CGAA CCGCCTG AAGTTGATGACAACG YPDSF_1505 1702691 - 1702200 - | hypothetical protein YPDSF_1506 1702233 - 1702718 + | hypothetical protein YPDSF_1507 1704431 - 1702695 - | hypothetical protein TERM 1854 1703344 - 1703314 - G 77 -10.4 -3.61398 | GCTTTCGGGGAATAA TCCGTCATCGCCAC GCT GTGGTACTGACGGA TATCAAAGGCCACCC YPDSF_1508 1705117 - 1704431 - | membrane protein TERM 1855 1704827 - 1704810 - G 74 -2.6 -5.09225 | overlap 1704811 1704812 AGGGTATTGAAAAAA TGCGCC TGTAAG GGCGAA TGGCACCACACGAAG YPDSF_1509 1706466 - 1705114 - | hypothetical protein TERM 1856 1706384 - 1706403 + g 90 -13.6 -3.68936 | ATGCATTCATTGGTC CAGGCCTC CCAG GAGGCCTG TTGTTGAAATTGCTG TERM 1857 1706450 - 1706433 - G 71 -5.5 -4.54727 | GCGGGGAAATCAAAA CTCCGCG AGTC CACAGAG GACGTTCAATCTTCA YPDSF_1510 1708022 - 1706478 - | hypothetical protein TERM 1858 1707983 - 1708005 + g 71 -6.3 -4.34402 | gap 1, overlap 1707984 TATTCTTTAATACGG TCGT-CGCAG TACC CTGCGCACGG TTTTCCTGTACAGAC YPDSF_1511 1708571 - 1708071 - | hypothetical protein TERM 1859 1708986 - 1709011 + r 82 -4.8 -5.41143 | opp_overlap 1708988, overlap 1708988 AGGAATTTGGGAAGT GATTTGTAGG AATTCG CCTACAAATA TTTTTTTCAGAAATG TERM 1860 1708988 - 1709009 + r 75 -7.4 -4.34482 | opp_overlap 1708988, overlap 1708986 GAATTTGGGAAGTGA TTTGTAGG AATTCG CCTACAAA TATTTTTTTCAGAAA YPDSF_1512 1710408 - 1709560 - | acyl transferase YPDSF_1513 1711281 - 1710793 - | hypothetical protein YPDSF_1514 1712108 - 1711320 - | short chain dehydrogenase YPDSF_1515 1712887 - 1712111 - | polyketide biosynthesis enoyl-CoA hydratase YPDSF_1516 1713584 - 1712865 - | enoyl-CoA hydratase TERM 1861 1713299 - 1713289 - G 70 -3.2 -4.87592 | CTAGACAGAATAAAA TCGA CAA CCGA CAGTAAGGCAAGCCC YPDSF_1517 1714815 - 1713577 - | putative hydroxymethylglutaryl-coenzyme A synthase TERM 1862 1713953 - 1713965 + g 74 -4.1 -5.03715 | opp_overlap 1713953 AAAATGCTGCCACAA TAGGT CGC GCCTA TTTTTTGCGCGTAAT YPDSF_1518 1715577 - 1714831 - | beta-ketoacyl-(acyl-carrier-protein) reductase TERM 1863 1715575 - 1715562 - G 74 -2.4 -5.07486 | CACCGCTAATAAAAA GGTT CATGTT AACC ATGATATCGACTAAA YPDSF_1519 1716853 - 1715570 - | beta-ketoacyl-(acyl-carrier-protein) synthase TERM 1864 1716631 - 1716613 - G 71 -5.2 -4.56597 | TCGTCTGTTTAAAAA CCTTCTCG GCA CGGGAAAG AACTATATCGGGAAT YPDSF_1520 1717367 - 1716843 - | putative (3R)-hydroxymyristoyl-(acyl-carrier-protein) dehydrase YPDSF_1521 1717951 - 1717631 - | hypothetical protein TERM 1865 1719083 - 1719073 - g 74 -6.8 -4.28548 | AGGGATTGACCAAAA CAGC AGC GCTG GAGGTTGCGACTACT YPDSF_1522 1718580 - 1719326 + | short chain dehydrogenase YPDSF_1523 1719480 - 1721897 + | oxidoreductase TERM 1866 1721920 - 1721939 + T 91 -10.6 -4.08064 | CTCAGCGCCTTATCT CCCCGCCC TGAA GGACGGGG TTTTACGGCGAACTT YPDSF_1524 1723311 - 1722331 - | hypothetical protein YPDSF_1525 1723775 - 1723497 - | hypothetical protein TERM 1867 1724318 - 1724306 - R 75 -2 -5.29782 | opp_overlap 1724306 TATATCCATAAAAAA TACT TCGTG AGTA TATATTGGATATATA YPDSF_1526 1724795 - 1724508 - | transposase YPDSF_1527 1725543 - 1725872 + | sulfite reductase subunit protein YPDSF_1528 1726202 - 1725924 - | acylphosphatase TERM 1868 1726046 - 1726067 + g 70 -9.5 -3.33162 | gap 1 GACGTTCAACTGCTT GTGGATTGCC GCT GGCAA-CCAC TTCTACGCTACCATC TERM 1869 1727412 - 1727437 + G 73 -10.5 -3.2964 | gap 1, opp_overlap 1727402 GAGCAGTTCCGCCAA GCTGCGGATCAC CCA GTGATC-GCGGC TTATCCAGAAGGTTT YPDSF_1529 1726296 - 1727486 + | hypothetical protein YPDSF_1530 1727547 - 1727864 + | hypothetical protein TERM 1870 1727908 - 1727938 + T 100 -9.7 -5.00616 | overlap 1727909 TGATTGCCAGGTTCG CCACCCTGTGAGC AGCAC GCTGACAGGGTGC TTTTTTAGAAAGCCC TERM 1871 1727909 - 1727937 + T 100 -13.2 -3.60048 | overlap 1727908 GATTGCCAGGTTCGC CACCCTGTGAGC AGCAC GCTGACAGGGTG CTTTTTTAGAAAGCC YPDSF_1531 1728389 - 1727973 - | hypothetical protein YPDSF_1532 1728705 - 1729385 + | hypothetical protein mgsA 1729564 - 1730028 + | methylglyoxal synthase TERM 1872 1730062 - 1730033 - T 86 -11.5 -3.29187 | gap 1, opp_overlap 1730037, overlap 1730028 1730037 ACCTAAAATAGGTAA CT-CACCCGGTGGT TCA ACCACCGGGTTTAG TATTGAGCATCGCTT TERM 1873 1730057 - 1730037 - T 100 -16.9 -2.58183 | opp_overlap 1730037, overlap 1730028 1730033 AAAATAGGTAACTCA CCCGGTGGT TCA ACCACCGGG TTTAGTATTGAGCAT TERM 1874 1730037 - 1730057 + T 100 -16.9 -3.92592 | opp_overlap 1730028 1730033 1730037 AAAATAGGTAACTCA CCCGGTGGT TCA ACCACCGGG TTTAGTATTGAGCAT helD 1732143 - 1730089 - | DNA helicase IV TERM 1875 1732295 - 1732305 + H 71 -2.4 -5.08824 | opp_overlap 1732282 TAGGCTATCGCTCAG CCAC ATT GCGG TTTTTTCACTCAACG YPDSF_1535 1732337 - 1732783 + | hypothetical protein TERM 1876 1734216 - 1734238 + G 71 -7.1 -4.19369 | gap 1, opp_overlap 1734218 TATTGAGGGGCAACT CACC-CTGAT TGTG ATCAGTGGTG TTCTGTTTTTTGCGT YPDSF_1536 1732813 - 1734951 + | hypothetical protein TERM 1877 1734961 - 1734979 + T 80 -11.7 -2.63747 | opp_overlap 1734961, overlap 1734960 GCCTAAGGTACCCAA GGGCCAC CCATC GTGGCCC ATTATACGGTTTCAT TERM 1878 1734979 - 1734961 - T 84 -11.7 -3.09933 | opp_overlap 1734961 1734960 GCCTAAGGTACCCAA GGGCCAC CCATC GTGGCCC ATTATACGGTTTCAT YPDSF_1537 1735688 - 1735053 - | hypothetical protein TERM 1879 1735788 - 1735769 - H 75 -5.8 -4.68506 | AACTAATTGCAAAAA TACGCAAT ATGG ATTACGTA GCCAAACATAAAATG YPDSF_1538 1735917 - 1736423 + | SOS cell division inhibitor TERM 1880 1736731 - 1736707 - f 71 -5 -4.62336 | ACGGGAGCGTAAAAA CCTTGGCGAA GAATT TTAACCAAGG GCTTAGCTTTTAAAT YPDSF_1539 1736781 - 1737842 + | outer membrane protein A TERM 1881 1737880 - 1737864 - f 100 -10.8 -4.56597 | opp_overlap 1737864 TTCTTTCGTGAAAAA CCCCGC GCTAT GCGGGG TTTTTTTTTGTGCCC TERM 1882 1737864 - 1737880 + F 100 -11.5 -6.22802 | opp_overlap 1737864 TTCTTTCGTGAAAAA CCCCGCG CTA TGCGGGG TTTTTTTTTGTGCCC TERM 1883 1737902 - 1737920 + F 100 -16 -3.07307 | opp_overlap 1737902 TTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC TERM 1884 1737920 - 1737902 - f 100 -16 -4.36914 | opp_overlap 1737902 TTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC YPDSF_1540 1738033 - 1738491 + | transposase for the IS1541 insertion element TERM 1885 1738565 - 1738597 + T 100 -11.3 -4.04149 | opp_overlap 1738572, overlap 1738569 1738571 1738572 CCTTATAGGCGCATA TGAAAAACCTCCGGC TAT GCCGGAGGATATTTA TTTATCCTGTGATTC TERM 1886 1738569 - 1738593 + T 100 -9.9 -4.60949 | opp_overlap 1738572, overlap 1738565 1738571 1738572 ATAGGCGCATATGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTTATCCTGTG TERM 1887 1738571 - 1738591 + T 100 -12.5 -3.90309 | opp_overlap 1738572, overlap 1738569 1738565 1738572 AGGCGCATATGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTTATCCTG TERM 1888 1738590 - 1738572 - T 100 -16 -4.8048 | opp_overlap 1738571 1738569 1738565 1738572 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTATCCT TERM 1889 1738572 - 1738590 + T 100 -16 -2.93101 | opp_overlap 1738572, overlap 1738571 1738569 1738565 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTATCCT YPDSF_1541 1739154 - 1738660 - | hypothetical protein TERM 1890 1739040 - 1739052 + g 76 -4.8 -5.0133 | GGCGGGTAATGGCTT CACC TTCAC GGTG TTTTTTGACCAAATA TERM 1891 1739392 - 1739420 + GH 70 -4.4 -4.61231 | TATGAAGCGTTATTT GCTACTGCCTCC CAATT GGAGCCTGTTGC TTTTTCAGCCTATCA TERM 1892 1740104 - 1740093 - gH 76 -5.8 -4.65916 | opp_overlap 1740093 1740092 CCTATTGCAACAAAA GCAG CTCC CTGC CTTATCTGCCGATGC YPDSF_1542 1739305 - 1741077 + | Lon protease YPDSF_1543 1741038 - 1741664 + | 3-hydroxydecanoyl-(acyl carrier protein) dehydratase TERM 1893 1741688 - 1741724 + F 79 -6.8 -4.69664 | gap 1, opp_overlap 1741691 1741694, overlap 1741691 AGTCAATGCATTGTA AAATAAGGCGAATATGA TTAA TCATGT-CGCCTTATTG TTTTTACGTGATATA TERM 1894 1741691 - 1741721 + F 87 -8.5 -4.4521 | gap 1, opp_overlap 1741691 1741694, overlap 1741688 CAATGCATTGTAAAA TAAGGCGAATATGA TTAA TCATGT-CGCCTTA TTGTTTTTACGTGAT YPDSF_1544 1742364 - 1742738 + | hypothetical protein TERM 1895 1742730 - 1742748 + F 100 -13.2 -4.01078 | CCAGGGGGTAATCTG CTCTCCTG ATT CAGGAGAG TTTATGGTCACTTTT YPDSF_1545 1742752 - 1743774 + | transposase TERM 1896 1743862 - 1743841 - f 71 -8.7 -3.3506 | gap 1, overlap 1743832 TGGAAAGCCTTATAA GCG-CAGCGC CTG GCGCTGTCAC AACAGGCAGTAGACC YPDSF_1546 1743892 - 1744554 + | transposase/IS protein TERM 1897 1744775 - 1744787 + G 70 -9.1 -3.61232 | opp_overlap 1744773, overlap 1744773 CATTCTTAGTGAATT TGGCC GCT GGCCA TGTTTCTATCAAACA YPDSF_1547 1744570 - 1745598 + | hypothetical protein TERM 1898 1745641 - 1745609 - T 100 -11.3 -4.72631 | opp_overlap 1745616, overlap 1745613 1745615 1745616 ACTAACGCAATAAAA TAAATATCCTCCGGC ATA GCCGGAGGTTTTTCA TATGCGCCTATAAGG TERM 1899 1745637 - 1745613 - T 100 -9.9 -4.88795 | opp_overlap 1745616, overlap 1745609 1745615 1745616 ACGCAATAAAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCATATGCGCCTAT TERM 1900 1745635 - 1745615 - T 100 -12.5 -4.04859 | opp_overlap 1745616, overlap 1745613 1745609 1745616 GCAATAAAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 1901 1745634 - 1745616 - T 100 -16 -3.01288 | opp_overlap 1745616, overlap 1745615 1745613 1745609 CAATAAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 1902 1745616 - 1745634 + T 100 -16 -4.8048 | opp_overlap 1745616 1745615 1745613 1745609 CAATAAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC YPDSF_1548 1746173 - 1745715 - | transposase for the IS1541 insertion element TERM 1903 1746304 - 1746286 - R 100 -16 -3.07307 | opp_overlap 1746286 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 1904 1746286 - 1746304 + r 100 -16 -4.36914 | opp_overlap 1746286 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 1905 1746346 - 1746322 - R 78 -5.8 -4.82901 | gap 1, opp_overlap 1746322 TTCTGGGCACAAAAA GGGATG-GCAT TTCC ATACCCATCCC TTAAATTTTCGGCTA acpS 1746755 - 1746375 - | 4'-phosphopantetheinyl transferase YPDSF_1550 1747486 - 1746755 - | pyridoxal phosphate biosynthetic protein PdxJ recO 1748370 - 1747645 - | DNA repair protein RecO TERM 1906 1748216 - 1748229 + g 76 -8.1 -4.27316 | opp_overlap 1748216 AATAACGGCGTAAAA GGCTG CAAG CAGCC TTTTAAATTGGAACG TERM 1907 1748229 - 1748216 - G 76 -8.1 -4.12599 | opp_overlap 1748216 AATAACGGCGTAAAA GGCTG CAAG CAGCC TTTTAAATTGGAACG era 1749291 - 1748380 - | GTP-binding protein Era rnc 1749968 - 1749288 - | ribonuclease III YPDSF_1554 1751318 - 1750320 - | lsignal peptidase I YPDSF_1555 1753127 - 1751328 - | GTP-binding protein LepA TERM 1908 1753123 - 1753136 + g 74 -3.9 -5.01497 | AAGTTTCTTATGTGA TTCAT TTAT ATGAA TTTTTCTCTAGTCGT TERM 1909 1753607 - 1753587 - H 75 -8.3 -3.80733 | GTGATTTTATAATAA CCAAGTGAA ATA TTCTCTTGG CGGTAACGAGGAGAG TERM 1910 1753695 - 1753677 - g 70 -4.4 -4.64383 | opp_overlap 1753693, overlap 1753678 AATGAGAAATGAAAA TGCATGGG TTA CCCTTGCT ACAATAATAGCTATA YPDSF_1556 1753627 - 1754481 + | hypothetical protein YPDSF_1557 1754957 - 1754502 - | SoxR reducing system protein RseC TERM 1911 1754578 - 1754588 + g 71 -6.8 -4.26076 | CTGAGCCCCTCAATT CTGG TTG CCAG TTTTCGTGCCAGTAA rseB 1755910 - 1754954 - | periplasmic negative regulator of sigmaE TERM 1912 1755821 - 1755854 + g 86 -13.3 -3.59979 | gap 1, opp_overlap 1755823 GCCCATTTCCTGCAA CATTGCTATCGGCGTA GAT TCCGCCGA-AGCAATG TTTGCCATGAACAGG YPDSF_1559 1756566 - 1755910 - | anti-RNA polymerase sigma factor SigE YPDSF_1560 1757167 - 1756592 - | RNA polymerase sigma factor RpoE TERM 1913 1757517 - 1757527 + G 70 -2.4 -4.91109 | overlap 1757506 AAAGGGCCTCTTAAT GAGG GAG CCAC TTTTTATGCTCAGGG TERM 1914 1758775 - 1758765 - g 76 -6.8 -4.46212 | GTCCGTACCACAAAA CGCT TAG AGCG GGCTTTACGGCGCAT YPDSF_1561 1757355 - 1758992 + | L-aspartate oxidase TERM 1915 1759038 - 1759014 - T 79 -11.4 -2.56539 | overlap 1759013 1759011 CTGAATCCATAAGAT TGAGGGCGTC TCTAC GACGCCCGCA GACTGCTGACAAACC TERM 1916 1759124 - 1759098 - T 84 -10.1 -3.82218 | gap 1, overlap 1759099 1759114 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATAGATG TERM 1917 1759125 - 1759099 - T 72 -10.1 -2.88849 | gap 1, overlap 1759098 1759114 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATAGATGT TERM 1918 1759200 - 1759223 + T 83 -8.9 -4.08958 | gap 1, opp_overlap 1759199 ACTTTGTCAATAACC TCAGGGCGTC TCTAC GACGCCC-GA TTCTTATTTCACGCT YPDSF_1562 1760021 - 1759275 - | hypothetical protein TERM 1919 1760507 - 1760492 - g 79 -5.4 -5.00616 | gap 1 TTCCCCCGCAAAAAA TCCG-GG CCA CCGCGGA TCCTGATCCTGACGC YPDSF_1563 1760273 - 1761598 + | ATP-dependent RNA helicase SrmB TERM 1920 1761619 - 1761636 + T 74 -4.8 -4.78237 | opp_overlap 1761614, overlap 1761614 1761607 TGCACGACAACAAAG CCGCTG CTCACA TAGCGG TTTTGTTGTCAGATA YPDSF_1564 1762385 - 1761729 - | phospholipase A accessory protein YPDSF_1565 1763425 - 1762463 - | phospholipase A TERM 1921 1763555 - 1763540 - R 100 -10.4 -5.1675 | opp_overlap 1763538 TCAGGCATGAAAAAA GGGGAC CGAA GTCCCC TATCACTTTATGATT YPDSF_1566 1763987 - 1763604 - | autonomous glycyl radical cofactor GrcA TERM 1922 1764101 - 1764114 + H 73 -3.9 -5.0133 | overlap 1764100 AGCCCCTACCATTCT TTGAT TCAA ATCAA TTTTTTCACCACATC YPDSF_1567 1764340 - 1765026 + | uracil-DNA glycosylase TERM 1923 1765078 - 1765105 + T 82 -10.6 -3.62597 | gap 1 GGACGTTGTCTGTAA CCTCACGCCA-CC TTC GGCTGCCGTGAGG TTATTGGAAGATCAG YPDSF_1568 1765764 - 1765117 - | pyrrolidone-carboxylate peptidase YPDSF_1569 1766793 - 1765774 - | hypothetical protein YPDSF_1570 1767521 - 1766790 - | hypothetical protein TERM 1924 1766929 - 1766903 - G 74 -7.3 -4.15841 | gap 1, overlap 1766904 TCAGGAAAGCACAAA TCGCGGT-TGGG ATCC CCCACAGCGCGA TATGCAATGGTTCCG YPDSF_1571 1768343 - 1767606 - | hypothetical protein YPDSF_1572 1769290 - 1768340 - | hypothetical protein YPDSF_1573 1769940 - 1769395 - | hypothetical protein TERM 1925 1770537 - 1770517 - R 100 -13.3 -2.9518 | overlap 1770509 TGTAAGACGGAGACA CGCCGATGC TAA ACATCGGCG AAAATAGCCCTATCC YPDSF_1574 1771305 - 1770559 - | putative hydrolase-oxidase YPDSF_1575 1772482 - 1771445 - | 3',5'-cyclic-nucleotide phosphodiesterase YPDSF_1576 1773936 - 1772473 - | deoxyribodipyrimidine photolyase TERM 1926 1773325 - 1773293 - G 74 -4 -4.91109 | opp_overlap 1773302, overlap 1773294 1773302 TGTTCACGACAAAAA CGGCGTAAACGCTG TAAGG CAGCGTCTTCCCCT GCAGGAAATAACTGG TERM 1927 1773651 - 1773637 - G 72 -3.5 -4.77165 | CTGTTGAGAATAAAA CAGGC TATCG ACCTG CTGTTGCTGACAAAA YPDSF_1577 1774548 - 1774066 - | hypothetical protein TERM 1928 1774850 - 1774826 - R 100 -12.1 -5.16237 | AAGCGCATTAAAAAA GCCCGTGGGCA TGA TACTCACGGGC CAGCTATTTTTTGTA YPDSF_1578 1775108 - 1774902 - | hypothetical protein TERM 1929 1774946 - 1774960 + g 72 -3.5 -4.84359 | ATTGGGTCAGCCAAA CCGGT TTATC ACTGG TTTTTATCCAGATAC TERM 1930 1775334 - 1775314 - H 71 -6.9 -4.12225 | opp_overlap 1775313 1775316 AATTAGCAAACCAAA TACATTCAC CCG GTGAAAGTA AGTTTCACAAACCAA YPDSF_1579 1775513 - 1775602 + | K+-transporting ATPase, F subunit TERM 1931 1775661 - 1775677 + G 82 -7.9 -4.60924 | TGTTGTTCGTGTTGT CCCGTCC GTT GGGTGGG TTTTTAGCACGTTTG TERM 1932 1776361 - 1776377 + G 70 -2.2 -4.92783 | TGCATTCAGTAATTT TGTCCA AATGC TGGCCA TTTTTCTGATCCCTT TERM 1933 1776512 - 1776524 + G 70 -10.5 -2.93447 | overlap 1776511 ATGTACGCCGAACTG GCGGG AAA CCCGC ATTTATCCCCGTTAG YPDSF_1580 1775603 - 1777291 + | potassium-transporting ATPase subunit A TERM 1934 1778138 - 1778172 + G 83 -9.2 -4.40298 | opp_overlap 1778138, overlap 1778140 GTGGAGGCCAGCCAA GCCGGTAGCCCGGTGA CCA TCACCGTGCTAGTCGC TTTATTGGTTTGCCT TERM 1935 1778140 - 1778171 + G 73 -10.2 -3.23094 | gap 1, opp_overlap 1778138, overlap 1778138 GGAGGCCAGCCAAGC CGG-TAGCCCGGTGA CCA TCACCGTGCTAGTCG CTTTATTGGTTTGCC TERM 1936 1778862 - 1778824 - g 70 -9.5 -3.30441 | gap 1, opp_overlap 1778821, overlap 1778825 GATCACCGGTGACAA TCGCCTAACCGCAGCGGC AATT GCCGCTGAAGCT-GGCGT AGATGATTTTCTGGC TERM 1937 1778861 - 1778825 - g 76 -13 -2.5805 | gap 1, opp_overlap 1778821, overlap 1778824 ATCACCGGTGACAAT CGCCTAACCGCAGCGGC AATT GCCGCTGAAGCT-GGCG TAGATGATTTTCTGG YPDSF_1581 1777385 - 1779451 + | potassium-transporting ATPase subunit B TERM 1938 1779585 - 1779558 - f 71 -9.8 -2.72855 | opp_overlap 1779558 1779557, overlap 1779560 TAAACCGTTTAACCA CAGCCATCGCAC CCTG ATGCGGTGGCCG GTTTTAAGACACAAA TERM 1939 1779790 - 1779774 - g 79 -12.3 -3.25942 | ATGTTTTCACAGCAA GCCAGTG GTT CACTGGC GCGACTGGGCGATAA YPDSF_1582 1779615 - 1780265 + | potassium-transporting ATPase subunit C TERM 1940 1781107 - 1781131 + F 71 -9.4 -3.01712 | overlap 1781109 1781111 GGTTGGCCGCCCGCT TAGGCTGCAT CTGGC ATGCAGTCTA TGTTGAAACCCCCCC TERM 1941 1781332 - 1781342 + F 71 -6.8 -4.1196 | opp_overlap 1781332 GAGCAACATTGGAAA CTGC GAG GCAG TTTTGCCGATCGCTT TERM 1942 1781625 - 1781652 + F 76 -9.8 -3.2657 | overlap 1781604 1781620 CCGCTGGCCTTCAGT GCTGGCGGCGGT GATT AATGTCGCCAGC TTCGATCTGTTTTTT TERM 1943 1781815 - 1781789 - f 76 -8 -4.15565 | opp_overlap 1781779 GCTATCAGGCTAAAA TTGCCCGTTATC GGG AACAACGGGCCA GACATCTGTATGAAA TERM 1944 1782897 - 1782911 + F 77 -3.5 -5.08255 | opp_overlap 1782894, overlap 1782896 GAAGCGTCAAGAGGG CGGAG CCAGC TTCCG TTTTGTTTTGCCACT TERM 1945 1783027 - 1783017 - f 82 -6.8 -4.77567 | overlap 1783018 AGGTTGATAACAAAA TGCC CGC GGCA GACAGAATAACGAAG YPDSF_1585 1783162 - 1783791 + | DNA-binding transcriptional activator KdpE YPDSF_1586 1783886 - 1784314 + | hypothetical protein TERM 1946 1784379 - 1784396 + T 100 -11.3 -4.8622 | opp_overlap 1784372 1784382 TAAATTAATCTTAGA TGACCGC CTGA GCGGTCA TTTTTAATTGCGCCA YPDSF_1587 1784684 - 1784442 - | hypothetical protein YPDSF_1588 1784840 - 1784727 - | hypothetical protein TERM 1947 1784980 - 1785003 + r 86 -11.8 -3.16564 | gap 1, opp_overlap 1784980 AAAACACATAAAAAA TCCGGCAACAG AGC CTGT-GCCGGA TTGATCGAGTGCCAA TERM 1948 1785003 - 1784980 - R 100 -11.8 -5.53079 | gap 1, opp_overlap 1784980 AAAACACATAAAAAA TCCGGCAACAG AGC CTGT-GCCGGA TTGATCGAGTGCCAA YPDSF_1589 1786743 - 1785058 - | phosphoglucomutase YPDSF_1590 1787301 - 1786774 - | replication initiation regulator SeqA TERM 1949 1787061 - 1787050 - G 74 -7.2 -4.27467 | opp_overlap 1787046 TAATACCAACATAAA GCGG TTAA CCGC CCTACTCTGTTCTGC YPDSF_1591 1787796 - 1788164 + | hypothetical protein TERM 1950 1788210 - 1788239 + T 100 -15.9 -2.91065 | opp_overlap 1788215, overlap 1788212 1788215 1788231 AGTCGCCTCTTGTAG GATAATGCCCCTA AAAA TGGGGGCATTATC TGTGATGTCTATGAT TERM 1951 1788212 - 1788237 + T 93 -12.7 -3.00259 | opp_overlap 1788215, overlap 1788210 1788215 1788231 TCGCCTCTTGTAGGA TAATGCCCCTA AAAA TGGGGGCATTA TCTGTGATGTCTATG TERM 1952 1788215 - 1788234 + T 80 -10 -3.63762 | opp_overlap 1788215, overlap 1788212 1788210 1788231 CCTCTTGTAGGATAA TGCCCCTA AAAA TGGGGGCA TTATCTGTGATGTCT TERM 1953 1788485 - 1788474 - T 70 -3.6 -4.8143 | TTAACAATCTAAAAA CGAC CCCA GCCG ATAACCACGTTGCGC YPDSF_1592 1789220 - 1788459 - | hypothetical protein YPDSF_1593 1790102 - 1789272 - | DNA-binding transcriptional regulator ChbR TERM 1954 1789786 - 1789756 - G 86 -6.8 -4.98061 | overlap 1789759 ATATAGGAAAGAAAA TCACCTCTTAAGCG ATA CGCCTGAGAGGCCA CAATAGGCCGAGACA TERM 1955 1789783 - 1789759 - G 75 -10.7 -3.34291 | overlap 1789756 TAGGAAAGAAAATCA CCTCTTAAGCG ATA CGCCTGAGAGG CCACAATAGGCCGAG YPDSF_1594 1790498 - 1790151 - | N,N'-diacetylchitobiose-specific PTS system transporter subunit IIA YPDSF_1595 1792026 - 1790665 - | N,N'-diacetylchitobiose-specific PTS system transporter subunit IIC YPDSF_1596 1792354 - 1792037 - | N,N'-diacetylchitobiose-specific PTS system transporter subunit IIB YPDSF_1597 1793127 - 1793306 + | hypothetical protein TERM 1956 1793682 - 1793664 - g 73 -11 -2.92668 | overlap 1793674 CAGTATGCAATTAGA TGCGGCCA AAC TGGCCACA GCCCGAGGCAGAGCA YPDSF_1598 1793395 - 1793775 + | membrane protein ccrB 1793791 - 1794195 + | camphor resistance protein CrcB TERM 1957 1794232 - 1794253 + T 75 -7.3 -4.34402 | opp_overlap 1794232 TCGTGACAAAAAAAA CACCCTC ACTTAACC GAGGGTG TTTTGATATAAACAC TERM 1958 1794253 - 1794232 - T 100 -8 -5.93809 | opp_overlap 1794232 TCGTGACAAAAAAAA CACCCTCA CTTAAC CGAGGGTG TTTTGATATAAACAC YPDSF_1600 1795468 - 1794293 - | voltage-gated potassium channel TERM 1959 1794564 - 1794580 + g 71 -6.5 -4.13767 | overlap 1794567 ATAATATATTTTGCC TTCGCCG CAC CGGCTAA TTTTAGCGTGGCAAC hdeB 1796086 - 1796415 + | acid-resistance protein TERM 1960 1796482 - 1796523 + T 91 -10.3 -4.20918 | opp_overlap 1796486, overlap 1796484 1796486 ATGTAACCTGTAAAA AAAAGACACTCATTAAGCG TTAT CGGTTAATGAGTGTCTCTA TTTGTTAGCCTTCCC TERM 1961 1796484 - 1796521 + T 100 -12.9 -3.70139 | opp_overlap 1796486, overlap 1796482 1796486 GTAACCTGTAAAAAA AAGACACTCATTAAGCG TTAT CGGTTAATGAGTGTCTC TATTTGTTAGCCTTC TERM 1962 1796486 - 1796519 + T 100 -15.5 -3.4214 | opp_overlap 1796486, overlap 1796484 1796482 AACCTGTAAAAAAAA GACACTCATTAAGCG TTAT CGGTTAATGAGTGTC TCTATTTGTTAGCCT TERM 1963 1796519 - 1796486 - T 100 -15.5 -5.77853 | opp_overlap 1796486 1796484 1796482 AACCTGTAAAAAAAA GACACTCATTAAGCG TTAT CGGTTAATGAGTGTC TCTATTTGTTAGCCT YPDSF_1602 1797661 - 1796603 - | nickel transport protein TERM 1964 1797702 - 1797734 + r 73 -10 -2.93853 | gap 1, overlap 1797698 CCTACCCGTTCTGAC CTGGCGTTATCGCTG ACAA CA-CGATAACGCCAA TAATTTGAGGTCTAT YPDSF_1603 1798802 - 1797810 - | urea transporter TERM 1965 1798692 - 1798668 - G 70 -4.3 -4.72986 | opp_overlap 1798671 1798674 TATTGCGATGAAAAA GAATAGCCC GGTCAAT GGGTTATTC TGAAACATTACCTGA TERM 1966 1798931 - 1798910 - R 84 -10.1 -3.86346 | opp_overlap 1798911 1798913, overlap 1798911 1798913 TCACTGGCTGATAAA CGAGGCTGG GTAC CCAGCCTCT ATTCAATAGACTGAC TERM 1967 1798911 - 1798930 + r 100 -13.6 -3.09327 | opp_overlap 1798910 1798911 1798913, overlap 1798913 CACTGGCTGATAAAC GAGGCTGG GTAC CCAGCCTC TATTCAATAGACTGA TERM 1968 1798930 - 1798911 - R 100 -13.6 -2.91593 | opp_overlap 1798911 1798913, overlap 1798910 1798913 CACTGGCTGATAAAC GAGGCTGG GTAC CCAGCCTC TATTCAATAGACTGA TERM 1969 1798913 - 1798928 + r 77 -10.4 -3.10522 | opp_overlap 1798911 1798910 1798913, overlap 1798911 CTGGCTGATAAACGA GGCTGG GTAC CCAGCC TCTATTCAATAGACT TERM 1970 1798928 - 1798913 - R 76 -10.4 -3.00946 | opp_overlap 1798913 1798911, overlap 1798911 1798910 CTGGCTGATAAACGA GGCTGG GTAC CCAGCC TCTATTCAATAGACT YPDSF_1604 1799101 - 1798994 - | urease accessory protein YPDSF_1605 1799960 - 1799127 - | hypothetical protein TERM 1971 1799568 - 1799588 + g 71 -6.2 -4.431 | overlap 1799557 GATCTGCGAGGCGTA GTTCGCAT TCATC ATGTGAAC TTTTGTGGCTGACTG YPDSF_1606 1800619 - 1799957 - | urease accessory protein YPDSF_1607 1801432 - 1800746 - | urease accessory protein ureE 1802149 - 1801454 - | urease accessory protein UreE ureC 1804163 - 1802445 - | urease subunit alpha TERM 1972 1803549 - 1803537 - G 71 -10.5 -3.14211 | opp_overlap 1803535, overlap 1803523 AGCCTGTTCCAGCAA CGGGC CGC GCCCG TATGAATTACCTTTC ureB 1804780 - 1804253 - | urease subunit beta ureA 1805042 - 1804740 - | urease subunit gamma YPDSF_1612 1806906 - 1806241 - | transport ATPase YPDSF_1613 1807705 - 1806899 - | transport ATPase YPDSF_1614 1808511 - 1807705 - | binding-protein-dependent transport protein TERM 1973 1808087 - 1808074 - G 70 -8.1 -3.69605 | GGCACGTAAAATCAA GGCCA GCTT TGGCC AGTGGGTTAATGCTA YPDSF_1615 1809491 - 1808508 - | membrane protein YPDSF_1616 1811053 - 1809476 - | solute-binding protein TERM 1974 1809982 - 1809995 + g 90 -8.1 -5.05601 | ACCAAAGCGTTATCT TGGCC GGTA GGCCA TTTTTCTCTCTGGTG TERM 1975 1811010 - 1810999 - G 78 -2.2 -5.36441 | CTGGGACAGAAAAAA CGCT CAAT AACG CAGTTGCCACCAAGG TERM 1976 1811426 - 1811406 - R 72 -6.1 -4.35644 | opp_overlap 1811406 1811410 1811416, overlap 1811403 1811407 AGTAGTAGAAAAGAA CCAAAAGCC CCA GGCTATTGA TTGGCTTGATTATTA TERM 1977 1811842 - 1811825 - R 100 -9.1 -6.25741 | opp_overlap 1811825 1811824 AAATAATAAAAAAAA CCCCGTC AAAA GACGAGG CTTCTAAATCTATTT YPDSF_1617 1812100 - 1811888 - | cold shock protein YPDSF_1618 1812608 - 1812946 + | hypothetical protein TERM 1978 1813243 - 1813225 - g 74 -2.4 -5.10933 | opp_overlap 1813225, overlap 1813226 CTACTGAAAATAAAA CCGATTTA TAT TGAATCGA TGTTGCAAGAGATGG YPDSF_1619 1813111 - 1813560 + | hypothetical protein YPDSF_1620 1813993 - 1813658 - | hypothetical protein TERM 1979 1814431 - 1814412 - R 100 -9.3 -5.63504 | opp_overlap 1814414 AAGCTTATAAAAAAA CACCCAC AATTAA GTGGGTG ATTGGGATTAACCTG YPDSF_1621 1814836 - 1814471 - | acid shock protein precursor TERM 1980 1814523 - 1814548 + g 90 -9 -4.63527 | gap 1, overlap 1814525 1814526 TTATGGTGCTTTTTC GCTGCCTGTGC TTTTT GCACGGGC-GC TTTTTGAACTGATGC nrdI 1815512 - 1815994 + | ribonucleotide reductase stimulatory protein TERM 1981 1817415 - 1817428 + G 81 -5.9 -5.03314 | CCTGCACGGTTATCT GGCGC GGGA GCGTC TTTTTTACGGCTCGG YPDSF_1623 1815976 - 1818126 + | ribonucleotide-diphosphate reductase subunit alpha nrdF 1818251 - 1819222 + | ribonucleotide-diphosphate reductase subunit beta TERM 1982 1819304 - 1819288 - f 80 -3.5 -5.37043 | ATTCTAGATAAAAAA GGGGGAG ACT CAGCCCC AATAGGCAGTTAGCC TERM 1983 1820829 - 1820818 - g 71 -5.8 -4.30576 | opp_overlap 1820818 GCTTCAGGATGAAAA CCGT GATT ACGG TTATGTGCTGGAACG YPDSF_1625 1819898 - 1821097 + | glycine betaine/L-proline transport ATP-binding protein YPDSF_1626 1821090 - 1822244 + | glycine betaine transporter membrane protein TERM 1984 1823094 - 1823081 - g 80 -2.3 -5.4505 | overlap 1823083 GTGGCGAACAAAAAA TGGGC TGAA GCCAA TCCGGCAGCCGCCAA proX 1822292 - 1823296 + | glycine betaine transporter periplasmic subunit TERM 1985 1823406 - 1823432 + T 72 -10.1 -2.88849 | gap 1, opp_overlap 1823395, overlap 1823401 1823407 ACATCCATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCTCTGCC TERM 1986 1823407 - 1823433 + T 84 -10.1 -3.82218 | gap 1, opp_overlap 1823395, overlap 1823401 1823406 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCTCTGCCT TERM 1987 1823496 - 1823515 + T 91 -7.2 -5.28176 | overlap 1823480 1823477 1823492 TTGTCAGCAGTCTGA CAGATACT TTCG GGTATCTG TTTTTTATCCCTACC YPDSF_1628 1824476 - 1823526 - | hypothetical protein YPDSF_1629 1824815 - 1826299 + | permease TERM 1988 1826345 - 1826319 - T 100 -15.3 -4.18303 | opp_overlap 1826319 AGCAGAAACGACAAA GCCCTGAGTTA TTACT TAACTCAGGGC TTCTAAATTTTGGCG TERM 1989 1826319 - 1826345 + T 100 -15.3 -3.52113 | opp_overlap 1826319 AGCAGAAACGACAAA GCCCTGAGTTA TTACT TAACTCAGGGC TTCTAAATTTTGGCG YPDSF_1630 1827309 - 1826545 - | DNA polymerase III subunit epsilon TERM 1990 1827660 - 1827640 - g 74 -2.4 -5.11033 | overlap 1827641 1827642 CATAACTGGAAAAAA CGCGGCTG GAAAA CAGCCGAT CGTAAGCCAGTGCGC rnhA 1827379 - 1827843 + | ribonuclease H YPDSF_1632 1828617 - 1827898 - | hypothetical protein TERM 1991 1828040 - 1828066 + g 75 -8.7 -3.9461 | overlap 1828041 CATCCCAACGCAGGC AGGTGGGTACT GATAA AGTGCCCACCG TTCTTATTGAAGGGC TERM 1992 1828041 - 1828065 + g 76 -12.2 -2.96444 | overlap 1828040 ATCCCAACGCAGGCA GGTGGGTACT GATAA AGTGCCCACC GTTCTTATTGAAGGG TERM 1993 1828946 - 1828911 - g 76 -3.2 -5.07107 | overlap 1828913 1828934 GAAACTGCGAAAAAA GGGGCCACCGTCAT TGTTAATG ATGGCGATAGCCTC ACCATTGCCGGACAA YPDSF_1633 1828662 - 1829417 + | hydroxyacylglutathione hydrolase TERM 1994 1830248 - 1830216 - g 76 -7 -4.58395 | TTTATGTTCCAAAAA TGCTGGCCTTGGGT GATTT ACTCAAGAACAGCA AAAAGTACGGTATAA YPDSF_1634 1829450 - 1830877 + | membrane-bound lytic murein transglycosylase D TERM 1995 1830914 - 1830899 - T 100 -9 -4.60889 | opp_overlap 1830899 AATCACTGTCAAAAA GCACCT TTCG AGGTGC TTTTTTTATGGTTGG TERM 1996 1830899 - 1830914 + T 100 -9 -5.71983 | opp_overlap 1830899 AATCACTGTCAAAAA GCACCT TTCG AGGTGC TTTTTTTATGGTTGG YPDSF_1635 1831681 - 1830920 - | hypothetical protein TERM 1997 1831030 - 1831016 - G 76 -3.4 -5.13354 | overlap 1831018 GCGATAAAAAATAAA GTCCAG AGG CCGGCC GAACGCACGACTGCG TERM 1998 1832537 - 1832519 - R 100 -9.6 -5.83211 | CACCAAAATAAAAAA CCACCTCA ATG TAAGGTGG CTCGTCCAGTGTCTT dkgB 1833365 - 1832562 - | 2,5-diketo-D-gluconate reductase B TERM 1999 1833217 - 1833243 + g 71 -5.1 -4.47397 | overlap 1833222 TTAATACCACTTTCT TGGATTGCCTG ACCAA CAGGCGCTTCA TTTTCATATATTTGT TERM 2000 1833719 - 1833739 + r 100 -14.1 -4.14739 | opp_overlap 1833719 TATAAATGCAAAAAA CCCTGAATC TAA GATTCAGGG TTTTGCAATAAGTGG TERM 2001 1833739 - 1833719 - R 100 -14.1 -5.24449 | opp_overlap 1833719 TATAAATGCAAAAAA CCCTGAATC TAA GATTCAGGG TTTTGCAATAAGTGG TERM 2002 1834174 - 1834164 - R 74 -6.8 -4.27316 | opp_overlap 1834164 TCTCTCAATTCAAAA CACC TTC GGTG TTGTAAGGTTAAGCC TERM 2003 1835286 - 1835297 + r 74 -4.4 -5.06816 | CCACTTTCGTGTTTG CACA GTGC TGTG TTTTTATTAAACAGT TERM 2004 1835333 - 1835359 + r 70 -9.4 -2.75844 | opp_overlap 1835309 1835311, overlap 1835332 1835335 CCAGCTGGTATCTGC GACTGGCTTCAG CTC CAGGAGCTAGTC CTTTCACCTAACGCC TERM 2005 1835793 - 1835811 + r 82 -10.3 -3.57798 | overlap 1835786 CTTGGTCTTCCGGCG TGCGGGT TTTTC ACCCGCA TTATCGTTACTTATG TERM 2006 1837249 - 1837286 + r 78 -5.7 -4.7629 | opp_overlap 1837243 1837249 1837252, overlap 1837252 ATTGTTAAAGAGCAA TATCGTAAACACGACTT GGTA AAGTCATCTTTACGTTA TTTTTCAGTTCATAA TERM 2007 1837252 - 1837283 + r 78 -7.4 -4.47888 | opp_overlap 1837249 1837243 1837252, overlap 1837249 GTTAAAGAGCAATAT CGTAAACACGACTT GGTA AAGTCATCTTTACG TTATTTTTCAGTTCA YPDSF_1637 1840100 - 1839534 - | D,D-heptose 1,7-bisphosphate phosphatase metN 1840287 - 1841318 + | DL-methionine transporter ATP-binding subunit TERM 2008 1841729 - 1841718 - g 74 -4.4 -4.79223 | GCAGATCATCAAAAA GGTA TTAT TACC AGAAGCCCTGCCCGG YPDSF_1639 1841311 - 1841964 + | DL-methionine transporter permease subunit metQ 1842028 - 1842843 + | DL-methionine transporter substrate-binding subunit TERM 2009 1842876 - 1842899 + F 100 -16.8 -3.97674 | opp_overlap 1842879, overlap 1842879 TATTGAATATATCGA CAAGACGGGC TATA GCCCGTCTTG TTATTTGAATAATAG TERM 2010 1842896 - 1842879 - f 100 -12.7 -3.42583 | opp_overlap 1842879 1842876 TGAATATATCGACAA GACGGGC TATA GCCCGTC TTGTTATTTGAATAA TERM 2011 1842879 - 1842896 + F 100 -12.7 -4.10744 | opp_overlap 1842879, overlap 1842876 TGAATATATCGACAA GACGGGC TATA GCCCGTC TTGTTATTTGAATAA rcsF 1842961 - 1843368 + | outer membrane lipoprotein TERM 2012 1843441 - 1843421 - g 74 -3.9 -4.99645 | overlap 1843423 ACCGTATAAAGAAAA GTTTGCGGT ACC ACGGCAACC CGGTTTGGTTGAGGA YPDSF_1642 1843365 - 1844072 + | hypothetical protein TERM 2013 1845830 - 1845819 - g 86 -5.8 -5.09762 | AGTGGAATACAAAAA CCGA CGCG TCGG TGAGAAACAAATGAT YPDSF_1643 1844176 - 1845894 + | prolyl-tRNA synthetase TERM 2014 1845970 - 1846005 + T 76 -7.7 -4.23999 | gap 2, opp_overlap 1845973 GGGTATTTTACTGAT GAAGCCGC-CGG-AG AACTTGAA CTACCGTGCGGCTTC TTATTTTAGCTATGG YPDSF_1644 1846711 - 1846028 - | lipoprotein involved with copper homeostasis and adhesion YPDSF_1645 1847236 - 1846796 - | hypothetical protein TERM 2015 1847224 - 1847249 + g 70 -9.1 -3.6445 | overlap 1847225 1847227 ACACACTTATTGCCC GTAGTTTTGCC ATTC GGCAAAACTAA TTTCCAGATTATTCT TERM 2016 1847225 - 1847248 + g 77 -12.6 -2.77947 | overlap 1847224 1847227 CACACTTATTGCCCG TAGTTTTGCC ATTC GGCAAAACTA ATTTCCAGATTATTC TERM 2017 1847227 - 1847246 + g 70 -10.8 -2.92935 | overlap 1847225 1847224 CACTTATTGCCCGTA GTTTTGCC ATTC GGCAAAAC TAATTTCCAGATTAT YPDSF_1646 1847763 - 1847215 - | hypothetical protein TERM 2018 1848169 - 1848154 - g 77 -11.8 -3.08679 | opp_overlap 1848155 CTCCGTTAGGGAACA GGCGGC CTAT GCCGCC GCTAACTTATTGGTG YPDSF_1647 1848005 - 1848205 + | hypothetical protein YPDSF_1648 1848192 - 1848452 + | Rho-binding antiterminator TERM 2019 1848467 - 1848502 + T 100 -17 -4.1043 | opp_overlap 1848474, overlap 1848474 GTTTCCACTTCCTTG TGAAAAACGGGTCGCT GAAG AGCGGCCCGTTTTGCA TTTATCCTATTTACA TERM 2020 1848495 - 1848474 - T 100 -11.5 -4.56597 | opp_overlap 1848474 1848467 CTTCCTTGTGAAAAA CGGGTCGCT GAAG AGCGGCCCG TTTTGCATTTATCCT TERM 2021 1848474 - 1848495 + T 100 -13.7 -4.40173 | opp_overlap 1848474, overlap 1848467 CTTCCTTGTGAAAAA CGGGTCGCT GAAG AGCGGCCCG TTTTGCATTTATCCT YPDSF_1649 1849034 - 1848717 - | cytochrome tilS 1850653 - 1849271 - | tRNA(Ile)-lysidine synthetase TERM 2022 1849411 - 1849391 - G 75 -9 -3.84185 | TTCACCGAAATATAA CAGCGGAA TACGT TCCCGCTG CCATGGGGGAATACC YPDSF_1651 1851053 - 1850655 - | hypothetical protein TERM 2023 1851214 - 1851192 - R 100 -5.5 -6.08563 | opp_overlap 1851192 1851200 1851205 AATAGATAAAAAAAA CCGGCGC TTAAATTCC GCACCGG CTTTTATCAGTTGGC YPDSF_1652 1852196 - 1851237 - | acetyl-CoA carboxylase carboxyltransferase subunit alpha TERM 2024 1851426 - 1851449 + g 76 -11 -3.31792 | CTTCAGTTCTTTTAG GCGATGTGCA GTAA TGCCCATCGC TTCTGCGGCTAATGG TERM 2025 1852113 - 1852141 + g 71 -6.8 -4.27584 | gap 1 ATCTAATTTTTCGTC TTGAC-GGCTGAC TGCA GTCAGCGAGTCAA TTTTCGCTTCCAGCT dnaE 1855724 - 1852209 - | DNA polymerase III subunit alpha TERM 2026 1853063 - 1853073 + g 76 -5.4 -4.8048 | opp_overlap 1853063 GTTTTTCTAAAATAC GCTT GTT AAGC TTTTTGGTATCGACA TERM 2027 1853521 - 1853544 + g 83 -5.2 -5.07486 | opp_overlap 1853521, overlap 1853523 TCTTCAAATACAGAA CGCTGCTTAG CCAT CTCAGCAGGG TTTTTCTTACCCATG TERM 2028 1854343 - 1854330 - G 71 -6.7 -4.25056 | overlap 1854334 GATCCGATCAACAAA GCCAT AGGG ATGGC CTAATACACGGCCGA TERM 2029 1854790 - 1854806 + g 76 -5.1 -4.82901 | overlap 1854791 AATTCCAAACGTTCT TCCAAAC CTT GTTTGGC TTTTTCTACCAGAAA rnhB 1856450 - 1855854 - | ribonuclease HII TERM 2030 1856275 - 1856303 + g 80 -2.3 -5.50499 | overlap 1856276 1856277 1856279 TCAGTGATTTCGTCA TACAGTGACAGGC GGC GCTTCTCGCTGAG TTTTTTTGAATCTGC lpxB 1857631 - 1856447 - | lipid-A-disaccharide synthase YPDSF_1656 1858423 - 1857635 - | UDP-N-acetylglucosamine acyltransferase fabZ 1858957 - 1858427 - | (3R)-hydroxymyristoyl-ACP dehydratase TERM 2031 1858992 - 1858980 - R 70 -2.7 -5.00616 | overlap 1858981 TTCCTGTCTAAAAAA CTGAT GCT ATCAA CAACACGGCCTGCAC lpxD 1860137 - 1859115 - | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase TERM 2032 1860088 - 1860056 - G 70 -11.4 -2.63823 | gap 1, overlap 1860044 1860053 1860052 AATGCATAGAAGCGA TGC-CGGTGATGACA AGAT CGCCATCACCGTGCA CCTGTGCATCCAACT YPDSF_1659 1860689 - 1860141 - | periplasmic chaperone TERM 2033 1860259 - 1860277 + g 70 -4.6 -4.6759 | opp_overlap 1860259 1860254 ACAGATTTAACAGCA TCCTGA ATACGGC TCAGGA TTTTGTTACGCTCTT YPDSF_1660 1863183 - 1860796 - | outer membrane protein assembly factor YaeT TERM 2034 1862173 - 1862183 + g 71 -5.4 -4.49311 | overlap 1862154 ATCCACGTTGATATG CAGT TTA ACTG TTTTATCGTCATCAT YPDSF_1661 1864575 - 1863220 - | zinc metallopeptidase cdsA 1865452 - 1864604 - | CDP-diglyceride synthase YPDSF_1663 1866220 - 1865462 - | undecaprenyl pyrophosphate synthetase TERM 2035 1865977 - 1865965 - G 83 -5.5 -5.06414 | GTGCTCGAACAAAAA GCTCC ATC AGAGC GGTCACTTCTTGGTC TERM 2036 1866309 - 1866290 - R 100 -8.6 -5.63504 | gap 1, opp_overlap 1866290, overlap 1866302 AAGTGCACAAAAAAA GCCGTGTAC CAA GT-CACGGC TTCTGGAGTGACAGC YPDSF_1664 1867640 - 1866444 - | 1-deoxy-D-xylulose 5-phosphate reductoisomerase TERM 2037 1867839 - 1867810 - R 100 -11.5 -5.44721 | gap 1, opp_overlap 1867815, overlap 1867815 ATGACCGGAAAAAAA GCA-AAGCGCCGCC TAA GGCGACGCTTATAC AATGCGAGTAGAGAT TERM 2038 1867815 - 1867833 + r 86 -11.6 -3.32963 | opp_overlap 1867810 1867815 CGGAAAAAAAGCAAA GCGCCGCC TAA GGCGACGC TTATACAATGCGAGT TERM 2039 1867833 - 1867815 - R 100 -13.8 -4.5187 | opp_overlap 1867815, overlap 1867810 CGGAAAAAAAGCAAA GCGCCGCC TAA GGCGACGC TTATACAATGCGAGT frr 1868411 - 1867854 - | ribosome recycling factor TERM 2040 1868347 - 1868366 + g 70 -4.4 -4.65895 | gap 1, overlap 1868347 1868348 ATTTTACTAATGTGG T-TCTGGAA TGC TTCCAGACA TTTTTCCATGCGCAC pyrH 1869272 - 1868547 - | uridylate kinase TERM 2041 1868588 - 1868606 + g 71 -5.8 -4.33153 | opp_overlap 1868590, overlap 1868590 TCTCACCCATCACCA CACGACGC AAA GCGCCGGG TTTATTCATGTTGAA TERM 2042 1868889 - 1868876 - G 73 -5.3 -4.72986 | TACCCGCAGCAAAAA TAACC ACAC GGTTA TGACGCAGCAAGCTA TERM 2043 1869471 - 1869448 - RH 100 -12.4 -4.68384 | opp_overlap 1869448 ATCGAGTGAATAAAA TGGAACCGCC TATT GGCGGCCCCA TTTGGAGCATTAAGA TERM 2044 1869448 - 1869471 + rH 70 -8 -3.57561 | opp_overlap 1869448 ATCGAGTGAATAAAA TGGAACCGCC TATT GGCGGCCCCA TTTGGAGCATTAAGA tsf 1870338 - 1869481 - | elongation factor Ts TERM 2045 1870410 - 1870392 - gR 100 -16 -3.74792 | CATTAGATATGCAAA GGGGGCCT ATA AGGCCCCC CTAACCAACATATTT TERM 2046 1870473 - 1870485 + Gr 76 -7.7 -4.16842 | CGGACTTATTATTCA GCTTC TAC GAAGC TTTCTTCCGCCTGAA rpsB 1871191 - 1870466 - | 30S ribosomal protein S2 YPDSF_1667 1869460 - 1870539 + | hypothetical protein YPDSF_1670 1871626 - 1872417 + | methionine aminopeptidase TERM 2047 1872427 - 1872441 + F 100 -12.8 -5.26316 | opp_overlap 1872427 1872421 GAGTAATAATGACAA GCCGGC ACC GCCGGC TTTTTTATGGGCTGC TERM 2048 1872441 - 1872427 - f 100 -12.8 -3.6216 | opp_overlap 1872427, overlap 1872421 GAGTAATAATGACAA GCCGGC ACC GCCGGC TTTTTTATGGGCTGC TERM 2049 1874362 - 1874352 - g 70 -4.6 -4.65895 | TTTGCGACCGAAAAA CAGC TAC GCCG CGGAATGCAAAATAG YPDSF_1671 1872477 - 1875158 + | PII uridylyl-transferase dapD 1875333 - 1876157 + | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase TERM 2050 1876167 - 1876187 + F 100 -8.3 -5.53288 | opp_overlap 1876166 1876164 1876167 1876169 GACTAAGATTAAGAG TAGCGGG CTAACCA CCCGCTA TTTTTTTGCCTTACG TERM 2051 1876604 - 1876579 - g 80 -2.5 -5.46706 | ATTTGAAAAGAAAAA TTCTGGATGAC CTAC GTCACCTGGAA AGTGTTGTCACCAAT YPDSF_1673 1876281 - 1876670 + | hypothetical protein TERM 2052 1876739 - 1876704 - T 86 -12.1 -3.17194 | overlap 1876706 ACCTCGGTAACCGAA TACGTATTGTGACAA CGAAAC TTGCCACAATACGCA ATAAAATCAAGATAT TERM 2053 1876737 - 1876706 - T 93 -12.5 -3.14878 | overlap 1876704 CTCGGTAACCGAATA CGTATTGTGACAA CGAAAC TTGCCACAATACG CAATAAAATCAAGAT YPDSF_1674 1877209 - 1876760 - | flavodoxin YPDSF_1675 1878010 - 1877237 - | tRNA pseudouridine synthase C YPDSF_1676 1878342 - 1878010 - | hypothetical protein TERM 2054 1878526 - 1878486 - R 100 -11.9 -6.17669 | opp_overlap 1878497, overlap 1878496 1878497 AACAAAACAAAAAAA CAAATAAATATCCTCCGGC ATA GCCGGAGGTTTTTCATATG CGCCTATAAGGCTCT TERM 2055 1878516 - 1878496 - R 100 -12.5 -4.05342 | opp_overlap 1878497, overlap 1878486 1878497 AAAAACAAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 2056 1878497 - 1878515 + r 100 -16 -4.8048 | opp_overlap 1878496 1878486 1878497 AAAACAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 2057 1878515 - 1878497 - R 100 -16 -2.99545 | opp_overlap 1878497, overlap 1878496 1878486 AAAACAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC YPDSF_1677 1879054 - 1878596 - | transposase for the IS1541 insertion element TERM 2058 1879167 - 1879185 + r 100 -16 -4.36914 | opp_overlap 1879167 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 2059 1879185 - 1879167 - R 100 -16 -3.07307 | opp_overlap 1879167 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 2060 1879204 - 1879227 + r 88 -12.5 -2.67189 | opp_overlap 1879204, overlap 1879201 1879200 TCTGGGCACAAAAAA GGGGTACTG TTTTAC CAGTACCCC TCAATTCGTTTTATA TERM 2061 1879227 - 1879204 - R 100 -12.5 -5.24129 | opp_overlap 1879204 1879201 1879200 TCTGGGCACAAAAAA GGGGTACTG TTTTAC CAGTACCCC TCAATTCGTTTTATA YPDSF_1678 1880295 - 1879744 - | SecY interacting protein Syd queF 1880427 - 1881272 + | 7-cyano-7-deazaguanine reductase TERM 2062 1881808 - 1881820 + G 72 -4.1 -4.90471 | GAGCTCCAGTCATTT GACTA ACC TGGTC TTTTCTATTTTACGT TERM 2063 1882438 - 1882461 + G 75 -10.3 -3.42354 | opp_overlap 1882436 1882438 1882441 GCCACTGGTGAAAGA GTATCGCCG TAATAC CGGCGATGC TTATAGCTTCAACTG YPDSF_1680 1881425 - 1882789 + | hypothetical protein TERM 2064 1882878 - 1882865 - f 75 -3.1 -5.1861 | TTGAGCAGCAAAAAA TGACA AATC TGCCA AGAGTAAATTTAAAT xni 1883049 - 1883804 + | exonuclease IX TERM 2065 1883842 - 1883819 - T 100 -14.6 -4.90455 | ATATACGCATAAAAA CTAAGGGGCC AATA GGCCCCTCAG ACTGCTGACAAACCC TERM 2066 1883927 - 1883901 - T 84 -10.1 -3.82218 | gap 1, overlap 1883902 1883917 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACTACATGG TERM 2067 1883928 - 1883902 - T 72 -10.1 -2.88849 | gap 1, overlap 1883901 1883917 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACTACATGGA TERM 2068 1884009 - 1884024 + T 86 -11.8 -3.16154 | opp_overlap 1884005 1884004 TTGTCAATAACCTCA GGGGCC AACA GGCCCC TTAAATATGATGTTA YPDSF_1682 1885161 - 1884055 - | putative RNA 2'-O-ribose methyltransferase YPDSF_1683 1885549 - 1885154 - | hypothetical protein TERM 2069 1885252 - 1885210 - G 73 -6.2 -4.46404 | opp_overlap 1885232 1885234, overlap 1885214 CAATCAACATCAAAA TCCATCCCGCCAGAAAACAG ACT CCGCCTACTGGCGTGATATA TATCCACAGTCTCAG TERM 2070 1885521 - 1885509 - G 100 -9.1 -5.47431 | GCAACATAGAAAAAA CCGCT CAG AGCGG AAAATATCAGCATTA YPDSF_1684 1886632 - 1885715 - | DNA-binding transcriptional activator GcvA TERM 2071 1886866 - 1886884 + H 84 -3.8 -5.54192 | opp_overlap 1886869, overlap 1886867 1886869 TCTGGTATGCCAGAC ATAGTAGC TAA GCTACTGC TTTTTTTCACTTCCT TERM 2072 1886867 - 1886883 + H 72 -7.3 -3.90888 | opp_overlap 1886869, overlap 1886866 1886869 CTGGTATGCCAGACA TAGTAGC TAA GCTACTG CTTTTTTTCACTTCC TERM 2073 1886937 - 1886957 + H 100 -9.7 -6.00086 | TAGTGATTTTATGCA GCACCGTTA TTT TGGCGGTGC TTTTTTTTATCCTAT YPDSF_1685 1887193 - 1888497 + | cysteine sulfinate desulfinase YPDSF_1686 1888632 - 1889075 + | hypothetical protein YPDSF_1687 1889938 - 1889111 - | hypothetical protein TERM 2074 1889203 - 1889192 - G 71 -5.8 -4.31895 | AGACACAGCAACAAA GCCA AACG TGGC AGTAACCATCGTTGC TERM 2075 1890042 - 1890027 - R 100 -11.8 -4.20084 | opp_overlap 1890027 AGTACTCATGCAAAA GCGGCC AACT GGCCGC TTAATCAAAACAAAT TERM 2076 1890027 - 1890042 + r 86 -11.8 -3.14211 | opp_overlap 1890027 AGTACTCATGCAAAA GCGGCC AACT GGCCGC TTAATCAAAACAAAT mltA 1891253 - 1890081 - | murein transglycosylase A TERM 2077 1890123 - 1890146 + g 75 -8.8 -3.86897 | gap 1 TGACGAATCATTACT GGTAGGCTCGC TCT GCGTGCC-ACC TTTATAAGCAGTGAA TERM 2078 1891976 - 1891989 + r 100 -8.1 -6.02919 | opp_overlap 1891976 GATATCATCATTAGA CACCC TATC GGGTG TTTTTTTGTTTCTGG YPDSF_1689 1893425 - 1892175 - | N-acetylmuramoyl-L-alanine amidase AmiC precursor YPDSF_1690 1893661 - 1893861 + | amino-acid acetyltransferase TERM 2079 1893921 - 1893939 + F 100 -13.2 -4.01078 | CCAGGGGGTAATCTG CTCTCCTG ATT CAGGAGAG TTTATGGTCACTTTT YPDSF_1691 1893943 - 1894965 + | transposase TERM 2080 1895046 - 1895032 - g 77 -11.4 -3.3506 | overlap 1895023 TGGAAAGCCTTATAA GCGCAG CGC CTGCGC TGTCACAACAGGCAG YPDSF_1692 1894965 - 1895657 + | ATPase YPDSF_1693 1895696 - 1896859 + | N-acetylglutamate synthase TERM 2081 1896990 - 1897013 + T 75 -8.8 -3.66772 | opp_overlap 1896991, overlap 1896991 TATTTGAAACAGATA ACTCAGGGCG CTTA TGCCCTGAGA TTATTGGCGATTTAA TERM 2082 1896991 - 1897012 + T 89 -12.3 -2.79581 | opp_overlap 1896991, overlap 1896990 ATTTGAAACAGATAA CTCAGGGCG CTTA TGCCCTGAG ATTATTGGCGATTTA TERM 2083 1897012 - 1896991 - T 95 -11.6 -3.76634 | opp_overlap 1896991 1896990 ATTTGAAACAGATAA CTCAGGGC GCTTAT GCCCTGAG ATTATTGGCGATTTA RecD 1898972 - 1897014 - | exonuclease V subunit alpha TERM 2084 1897128 - 1897112 - G 71 -6.5 -4.1552 | overlap 1897113 CATCGCTGCAATAAA GCGTCAG ATG CTGACGG GCGCGGGTAATGGCG RecB 1902631 - 1898969 - | exonuclease V subunit beta TERM 2085 1901590 - 1901602 + g 70 -3.3 -4.79223 | CATCAAACCCCAGCT CTGCA CGC TGCCG TTTTTCCTGCTGTAC YPDSF_1696 1905516 - 1902628 - | protease III precursor TERM 2086 1903192 - 1903180 - G 70 -9.1 -3.61715 | GATCTGCCCTAACAA GGCAC TAC GTGCC ATACCAGCAATTTCT TERM 2087 1904333 - 1904351 + g 95 -6 -5.52986 | AGATTCAATACATGT GCAATTTC ATC GAAATAGC TTTTTTTAATCCCCT TERM 2088 1904411 - 1904397 - G 78 -6.4 -4.88407 | TGATGTAATCAAAAA TTGCCG CGA CGACAA CATCACGTTGTGCCA recC 1908969 - 1905598 - | exonuclease V subunit gamma YPDSF_1698 1909469 - 1909104 - | prepilin peptidase dependent protein YPDSF_1699 1909972 - 1909502 - | hypothetical protein YPDSF_1700 1910577 - 1909969 - | hypothetical protein YPDSF_1701 1911137 - 1910568 - | hypothetical protein TERM 2089 1911059 - 1911071 + g 76 -4.9 -5.04601 | TTATTAGTGATCTTT GTTTT ATA AAAAC TTTTTGCTTTCTAAG TERM 2090 1911241 - 1911256 + r 74 -4.7 -4.82901 | AAATACAGGGAGGTC TGCGA TACGAC TCGCA TTTTTATCGGAAGAC TERM 2091 1911363 - 1911345 - R 86 -8.8 -4.36485 | ATAAAAGACGCAAAA CGGAGCCA TTA CAGCTCCG ATATGAAGATTAAAT thyA 1912167 - 1911373 - | thymidylate synthase TERM 2092 1911745 - 1911724 - G 82 -7.3 -4.6902 | gap 1, opp_overlap 1911724 1911733, overlap 1911728 GTAGAACTGGAAAAA GGCA-TGGCA TGG TGCCAACGCC ATTTGATCCAGTTCG YPDSF_1703 1913046 - 1912174 - | prolipoprotein diacylglyceryl transferase YPDSF_1704 1915543 - 1913297 - | fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain-containing protein TERM 2093 1915383 - 1915353 - G 76 -12.5 -2.62983 | opp_overlap 1915353 1915354, overlap 1915342 GCCAGCGTGATAGTA CGCCCACGGGGCT TTTTC AGCCCCCTGGTCG CCATTAGGTAGTAAC TERM 2094 1915354 - 1915364 + g 82 -8.2 -4.57073 | opp_overlap 1915342 1915353, overlap 1915353 CCAGCGTGATAGTAC GCCC ACG GGGC TTTTTCAGCCCCCTG YPDSF_1705 1916083 - 1915556 - | dinucleoside polyphosphate hydrolase TERM 2095 1916502 - 1916492 - H 81 -5.4 -5.10497 | AAGTTACGCAAAAAA GAGT AAA ACTC GCAAAAAAGCCTCTC TERM 2096 1916525 - 1916511 - H 73 -3.5 -5.08011 | AAAACTCGCAAAAAA GCCTC TCGTC AAGGC TGTAAATTGAACCAG TERM 2097 1917071 - 1917044 - g 71 -5.6 -4.49389 | gap 1 AGTGCACAAGGAAAA CCACTGGAAACGA CAT TCGTCTGC-GTGG CACCACTCACCGGGA YPDSF_1706 1916780 - 1917466 + | DNA mismatch repair protein TERM 2098 1917572 - 1917552 - f 77 -8.3 -3.96298 | TAGTGATTAATTAAA GCGGGAT GTTCTCT ATCCCGC AGGTGCTTTATATCT TERM 2099 1918092 - 1918080 - g 71 -10.5 -3.1733 | overlap 1918078 1918077 CGCTGGATAAAAGCA CGCGG TTG CCGCG AAAAAATTATTTTAG TERM 2100 1918743 - 1918754 + G 74 -7.2 -4.16842 | overlap 1918727 GCTCTGGCCTTTGTG CGGC AACA GCCG TTTGTTGCCAGTACG YPDSF_1707 1917855 - 1918895 + | putative aldo-keto reductase TERM 2101 1918950 - 1918935 - f 91 -11.8 -3.43203 | opp_overlap 1918930 1918929 CTATCATAATATGAA GGCCGC TGAT GCGGCC TTGAGGTTATTGACA TERM 2102 1919030 - 1919056 + F 70 -7.2 -3.74872 | gap 1, opp_overlap 1919018, overlap 1919029 CATCCATGTAGGCTC GAG-CCGCGCC CTCCCT GGCGCGGACGC TTTACTCCCCTGCCT TERM 2103 1919113 - 1919142 + F 100 -16.5 -3.02511 | CGGGGTTTGTCAGCA TTCTGAAGGCCGC TGAT GCGGCCTTCAGGG TATTGACAAAGTGCC TERM 2104 1919807 - 1919858 + G 73 -11.8 -2.69964 | gap 1, opp_overlap 1919827, overlap 1919824 TTTCAAAAGGCGATA TTTGTCAGCAGTCTGAA-GGATCTC CTT GAGATCCTTTCAGATGACAGACAAA TCATATCATTCAGGC YPDSF_1708 1919602 - 1919835 + | hypothetical protein TERM 2105 1919824 - 1919840 + T 84 -10.9 -3.59979 | opp_overlap 1919827, overlap 1919807 TGTCAGCAGTCTGAA GGATCTC CTT GAGATCC TTTCAGATGACAGAC YPDSF_1709 1921084 - 1919864 - | hypothetical protein TERM 2106 1920282 - 1920261 - G 87 -10.1 -4.38712 | gap 1, overlap 1920262 TTTAGCGTCACAAAA CGGGCGGCGG CAC CCG-CGCCCA CCACAATCCCAATCG TERM 2107 1920281 - 1920262 - G 76 -11.4 -3.22906 | gap 1, overlap 1920261 TTAGCGTCACAAAAC GGGCGGCGG CAC CCG-CGCCC ACCACAATCCCAATC YPDSF_1710 1923237 - 1921081 - | bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase TERM 2108 1923369 - 1923352 - R 100 -11.3 -6.11644 | GTACCTAAAAAAAAA CCTACGC ATCT GCGTAGG TCGGTGCAAATAAAA YPDSF_1711 1925947 - 1923686 - | biotin sulfoxide reductas2 YPDSF_1712 1926257 - 1927279 + | DNA-binding transcriptional regulator GalR YPDSF_1713 1928538 - 1927276 - | diaminopimelate decarboxylase TERM 2109 1928282 - 1928296 + g 70 -11.4 -2.64155 | opp_overlap 1928279, overlap 1928279 1928278 CCCGGTTGATAACCC GCGTGC AAG GCACGC TCGATTTCACCCAAA YPDSF_1714 1928753 - 1929694 + | DNA-binding transcriptional regulator LysR YPDSF_1715 1930851 - 1929691 - | sugar transport protein YPDSF_1716 1932128 - 1931220 - | LysR family transcriptional regulator YPDSF_1717 1932235 - 1933122 + | hypothetical protein YPDSF_1718 1933235 - 1933870 + | hypothetical protein YPDSF_1719 1935547 - 1933856 - | methyl-accepting chemotaxis protein TERM 2110 1933888 - 1933918 + g 91 -9.1 -4.84359 | overlap 1933890 CAATAGCAGCAATCG TGCTCTCCTTTGC TAATC GTAGAGGAGAGTA TTTTTCTACAGGTAA TERM 2111 1933890 - 1933916 + g 80 -9.5 -4.04397 | overlap 1933888 ATAGCAGCAATCGTG CTCTCCTTTGC TAATC GTAGAGGAGAG TATTTTTCTACAGGT YPDSF_1720 1936427 - 1935711 - | hypothetical protein TERM 2112 1936270 - 1936286 + g 71 -6.7 -4.15703 | opp_overlap 1936268 1936270 TGCTGCTGATAAACA GATAAAA ACG TTTTATC TTGTTCTTTATCCAA TERM 2113 1936496 - 1936475 - R 84 -10.1 -3.74693 | TGCCACCGTATTAAA GGTGATCGC TCAG GCGGTCACC GAACTCGATAATAAA YPDSF_1721 1937678 - 1936470 - | transposase for the IS285 insertion element YPDSF_1722 1938076 - 1937726 - | hypothetical protein YPDSF_1723 1938412 - 1939248 + | 5-keto-4-deoxyuronate isomerase TERM 2114 1939280 - 1939264 - f 70 -7.2 -3.77196 | opp_overlap 1939264 GTATCACCTATTAAA GCCACC TTTAC GGCGGC TTTCACCTCCAATAA TERM 2115 1939493 - 1939513 + G 70 -4.6 -4.59773 | opp_overlap 1939490 1939493 GAGACTATCGAACAA GTGACTGC ACTGG GCCGTCGC TTTTTCAGCCTGACC YPDSF_1724 1939295 - 1940101 + | 2-deoxy-D-gluconate 3-dehydrogenase TERM 2116 1940189 - 1940208 + F 100 -12.2 -5.74288 | opp_overlap 1940186 CTCAAAAACGCATCA GGCACAAC TTTG GTTGTGCC TTTTTTATTATTTAT TERM 2117 1940303 - 1940287 - f 91 -3.7 -5.83211 | CACCAAAATAAAAAA TCAAAAC AAC GTTCCGA CTTCGATCACACTTT YPDSF_1725 1940437 - 1942104 + | exopolygalacturonate lyase YPDSF_1726 1942145 - 1943035 + | ABC sugar transporter (permease) YPDSF_1727 1943028 - 1943948 + | sugar ABC transporter (permease) YPDSF_1728 1943962 - 1945089 + | sugar ABC transporter TERM 2118 1945644 - 1945633 - g 84 -4.4 -5.30616 | opp_overlap 1945633 1945635 GTATTTAAAGAAAAA TTGG GTGA CCAA TATTACCCTGTTGTA YPDSF_1729 1945105 - 1946397 + | sugar-binding protein TERM 2119 1946424 - 1946461 + F 100 -14.4 -3.74693 | opp_overlap 1946424 1946429, overlap 1946429 ATTTAACTTAAGTCA CAAAATAACCCTGCCA TTTATT TGGTGGGGTTATTTTG TTTAATCAAATAAAA TERM 2120 1946461 - 1946424 - f 71 -10 -2.57192 | opp_overlap 1946424 1946429, overlap 1946429 ATTTAACTTAAGTCA CAAAATAACCCTGCCA TTTATT TGGTGGGGTTATTTTG TTTAATCAAATAAAA TERM 2121 1946429 - 1946456 + F 100 -8.5 -4.93877 | opp_overlap 1946424 1946429, overlap 1946424 ACTTAAGTCACAAAA TAACCCTGCCA TTTATT TGGTGGGGTTA TTTTGTTTAATCAAA YPDSF_1730 1946695 - 1947405 + | hypothetical protein TERM 2122 1947473 - 1947502 + F 100 -13.1 -5.53288 | gap 1, opp_overlap 1947480 1947481 CTCTGCATTATTTTG GGGAAAAGTTGACT CCC AGTCA-CTTTTCCC TTTTTTTAGCTTAGC TERM 2123 1948333 - 1948372 + G 82 -11.2 -3.76641 | opp_overlap 1948330 TGGCCGATATGATTA CGCCAGCCGGTGTGCCGC TATT GTGGCCCTGCCGCTGGCG TTTCAGTATTCCGCT YPDSF_1731 1947975 - 1948523 + | hypothetical protein YPDSF_1732 1948727 - 1950118 + | transport protein YPDSF_1733 1951184 - 1950333 - | N-acetylmuramoyl-L-alanine amidase TERM 2124 1951446 - 1951466 + r 82 -6.8 -4.82901 | opp_overlap 1951446 TCATGTGATGAAAAA CAGCCCCT GCCAG AGGAGCTG TTTTTATAAAAAGAG TERM 2125 1951466 - 1951446 - R 100 -9 -4.7373 | opp_overlap 1951446 TCATGTGATGAAAAA CAGCCCCT GCCAG AGGAGCTG TTTTTATAAAAAGAG YPDSF_1734 1952360 - 1951569 - | IclR family transcriptional regulator TERM 2126 1952534 - 1952508 - R 100 -12.4 -3.88498 | CTTGCAGACAGCAAA TTAGCCTCTTTC TAA GAGAGAGGCTAA TGGAAAACTCGGCTA YPDSF_1735 1953713 - 1952547 - | oligogalacturonate lyase TERM 2127 1954456 - 1954481 + G 84 -11.3 -3.81691 | overlap 1954439 TCGAGCCCAACTTGG TCGAGGTATTG GTAT CAATACCTTGA TTGTTGCTGTGTCTT YPDSF_1736 1954040 - 1955407 + | transport protein YPDSF_1737 1956264 - 1955461 - | chaperone protein YPDSF_1738 1957424 - 1956261 - | fimbrial protein YPDSF_1739 1960033 - 1957421 - | outer membrane usher protein TERM 2128 1957737 - 1957747 + g 73 -5.4 -4.68994 | opp_overlap 1957728, overlap 1957733 GCAACAGCACCTGCG GTTG GCG CAAC TTTTTGGCTAGTACT TERM 2129 1960117 - 1960066 - R 72 -10 -2.84999 | opp_overlap 1960066 1960081, overlap 1960081 ATTAAATGCAGTATA TAAAAGTGCAAAAAATACAAATTA CCCT TAATTTGTATTTTTTATAGTTTTA TTGGGTCAGTTTTTG TERM 2130 1960066 - 1960117 + r 74 -10 -3.14261 | opp_overlap 1960066 1960081, overlap 1960081 ATTAAATGCAGTATA TAAAAGTGCAAAAAATACAAATTA CCCT TAATTTGTATTTTTTATAGTTTTA TTGGGTCAGTTTTTG TERM 2131 1960102 - 1960081 - R 90 -7.5 -5.15117 | opp_overlap 1960066 1960081, overlap 1960066 TAAAAGTGCAAAAAA TACAAATTA CCCT TAATTTGTA TTTTTTATAGTTTTA TERM 2132 1960081 - 1960102 + r 95 -7.5 -5.4588 | opp_overlap 1960081 1960066, overlap 1960066 TAAAAGTGCAAAAAA TACAAATTA CCCT TAATTTGTA TTTTTTATAGTTTTA YPDSF_1740 1960894 - 1960115 - | chaperone protein TERM 2133 1960926 - 1960944 + r 100 -10.3 -4.386 | opp_overlap 1960925 1960924 TCGAACTTATAAAGC TGGGAGC ACTAA GCTCCCA TTTTATGCCGGATTG YPDSF_1741 1961589 - 1961047 - | fimbrial protein TERM 2134 1961980 - 1961965 - R 100 -4.8 -5.9362 | GAAAAGACAAAAAAA TTCATT TTTC AATGAA GTAAGTCACAGATTT TERM 2135 1962169 - 1962141 - R 100 -13.2 -5.44119 | GCCACGGTAAAAAAA CACCCTGTCAGC TTACC GCTCACAGGGTG TGAAGACCATATTAT YPDSF_1742 1963128 - 1962247 - | heat shock protein HtpX TERM 2136 1963561 - 1963540 - R 100 -8.7 -6.31682 | opp_overlap 1963540 AAAAGCAAAAAAAAA TCCGAGTCC AATA AGACCCGGA TTCTTCATATTATTT YPDSF_1743 1965655 - 1963583 - | carboxy-terminal protease YPDSF_1744 1966388 - 1965675 - | putative solute/DNA competence effector TERM 2137 1965932 - 1965959 + g 76 -2.7 -5.08824 | overlap 1965932 TGCGGTTTTCCGGAG CC-GCACCCGCTT CACG ACGCGG-TGCAGG TTTTTTACCTGCCGG TERM 2138 1966210 - 1966231 + g 73 -10.9 -3.29147 | GTGTAGAGACGCAGC GCAGAACGC AATT GCGTTTTGC TTAAATTCTCTTCCC TERM 2139 1966332 - 1966322 - G 79 -8.2 -4.41348 | CGGCGGTGAAACAAA GCGG GAA CCGC TCGGCCAAAAAGGCT TERM 2140 1966456 - 1966437 - R 86 -12.2 -3.1552 | overlap 1966435 GCGCAGGCATGAACA GGCGTCAT TATA ATGACGCC ATCAGCAATTGCCAC YPDSF_1745 1966981 - 1966484 - | hypothetical protein TERM 2141 1966721 - 1966733 + g 73 -6.2 -4.4891 | ATGCACATTACCTAC CCGC TGAAC GCGG TTTTCTGCTACTGCG TERM 2142 1967072 - 1967053 - H 90 -10.8 -3.91642 | opp_overlap 1967053, overlap 1967009 AAAATAATCATTAAA TACCCTTG GCGA CAAGGGTA TTCCTCTGTAATGTT TERM 2143 1967053 - 1967072 + H 81 -10.8 -3.34936 | opp_overlap 1967009 1967053 AAAATAATCATTAAA TACCCTTG GCGA CAAGGGTA TTCCTCTGTAATGTT TERM 2144 1967386 - 1967401 + GH 71 -9 -3.39449 | GACCCGGTTGACCGC CATGGC TTGC GCCATG TTGCTGTTAATACCG YPDSF_1746 1967108 - 1968460 + | hypothetical protein TERM 2145 1968908 - 1968889 - gf 72 -10 -2.76671 | opp_overlap 1968889, overlap 1968888 ATACTCAGCCTAAAT TCCGCCTG AATA CAGGCGAA TTAATGATTCATCTC TERM 2146 1970340 - 1970326 - gf 77 -8.5 -3.98282 | overlap 1970296 TGTATAGTAATGAAA CGGCC GCACG GGCCG TGGGTAGCCAGATTA YPDSF_1747 1968429 - 1971080 + | hypothetical protein TERM 2147 1971788 - 1971804 + G 74 -6.5 -4.29304 | opp_overlap 1971770 1971769, overlap 1971784 GCATTCAGTGGCACA CTGAGCG GGA CTCTCAG TTTGTATTGTAGTGC YPDSF_1748 1971560 - 1972114 + | hypothetical protein YPDSF_1749 1972120 - 1972650 + | hypothetical protein YPDSF_1750 1972671 - 1973228 + | hypothetical protein YPDSF_1751 1973259 - 1974011 + | chaperone protein YPDSF_1752 1974199 - 1976646 + | outer membrane usher protein YPDSF_1753 1976852 - 1977841 + | hypothetical protein YPDSF_1754 1978049 - 1978288 + | hypothetical protein YPDSF_1755 1978787 - 1978398 - | hypothetical protein YPDSF_1756 1979055 - 1979180 + | hypothetical protein TERM 2148 1979172 - 1979190 + F 100 -13.2 -4.01078 | CCAGGGGGTAATCTG CTCTCCTG ATT CAGGAGAG TTTATGGTCACTTTT YPDSF_1757 1979194 - 1980216 + | transposase for insertion sequence IS100 TERM 2149 1980297 - 1980283 - g 77 -11.4 -3.3506 | overlap 1980274 TGGAAAGCCTTATAA GCGCAG CGC CTGCGC TGTCACAACAGGCAG YPDSF_1758 1980216 - 1980995 + | transposase/IS protein TERM 2150 1981678 - 1981704 + T 82 -2.2 -5.60993 | opp_overlap 1981678 CCATTCATCGAAAGA GTGTTCCGAG TAGCTAT CGCTGAACAC TTTTTTTATCGAGGA YPDSF_1759 1983202 - 1981946 - | lipoprotein TERM 2151 1982066 - 1982080 + g 76 -11.4 -3.19522 | opp_overlap 1982065 1982064 TCCTTCGGCATAACC CGCCTG ATA CAGGCG TTCCATCTTGACTGG TERM 2152 1983455 - 1983429 - R 72 -7.2 -3.9749 | gap 1, overlap 1983430 AGGCAGAAGAGTAAA GCGTCCGCGCC AGGGAG GGCGCGG-CTC GAGCCCCCAGGGATG YPDSF_1760 1983843 - 1983595 - | hypothetical protein YPDSF_1761 1984990 - 1986219 + | alanine racemase YPDSF_1762 1987791 - 1986838 - | hypothetical protein TERM 2153 1987853 - 1987824 - R 84 -10.7 -3.61089 | opp_overlap 1987825, overlap 1987825 CCCTAAGAAGTAGAA TCGGGCTGTGCAA AAAA TCGCACAACCCGT TAATGATTATTAAAC TERM 2154 1987825 - 1987852 + r 76 -9.8 -3.33171 | opp_overlap 1987825 1987824 CCTAAGAAGTAGAAT CGGGCTGTGCAA AAAA TCGCACAACCCG TTAATGATTATTAAA TERM 2155 1987852 - 1987825 - R 95 -14.2 -2.76171 | opp_overlap 1987825, overlap 1987824 CCTAAGAAGTAGAAT CGGGCTGTGCAA AAAA TCGCACAACCCG TTAATGATTATTAAA YPDSF_1763 1988436 - 1987891 - | surface protein YPDSF_1764 1990522 - 1988312 - | hypothetical protein TERM 2156 1989078 - 1989064 - GR 80 -11.4 -2.64747 | opp_overlap 1989072, overlap 1989063 1989066 TGACCGCATCATAAT CAGCCG AAC CGGCTG CCACACCGGTGATCT TERM 2157 1989555 - 1989541 - GR 80 -11.4 -2.68719 | opp_overlap 1989549, overlap 1989540 1989543 TGACCACATCATAAT CAGCCG AAC CGGCTG CCACACCGGTGATCT TERM 2158 1989921 - 1989944 + gr 72 -9.6 -3.09933 | gap 1 GCAATAGCATCCTGA CCCGCAGGCAC GGA GT-CTTGCGGG TTCACTGAGTTGGCG TERM 2159 1990023 - 1990009 - GR 84 -11.4 -3.1506 | AAAGCTGGCTACCAA CCACCG CAT CGGTGG AGGTCGATGAAATCG TERM 2160 1990225 - 1990211 - GR 72 -7.8 -3.85817 | AGGGGTGGCGATAAA GCTAGG CTT CCCAGC GATCCCACCTTTTCC YPDSF_1765 1991643 - 1990879 - | N-acetylmuramoyl-L-alanine amidase TERM 2161 1991724 - 1991710 - H 71 -10 -2.63257 | overlap 1991706 ACTGTATATAATCCA GCACAC AAT GTGTGC GCCGCATCAATATTT YPDSF_1766 1991775 - 1991894 + | hypothetical protein TERM 2162 1992198 - 1992163 - T 74 -4.6 -4.81685 | overlap 1992169 ATGAAGTATGAAAAA TATAAACCGGCAGGGA CAAT TCCCTACCGGTTAGCG CTATCGATAACGTCA TERM 2163 1992192 - 1992169 - T 100 -14.6 -4.58297 | overlap 1992163 TATGAAAAATATAAA CCGGCAGGGA CAAT TCCCTACCGG TTAGCGCTATCGATA YPDSF_1767 1992858 - 1992214 - | chemotaxis regulator CheZ YPDSF_1768 1993257 - 1992868 - | chemotaxis regulatory protein CheY YPDSF_1769 1994406 - 1993417 - | protein-glutamate methylesterase TERM 2164 1993644 - 1993623 - G 71 -6.6 -4.25859 | gap 1, overlap 1993637 CCGAACGGAAAAGAA CGTCAACCG AAGGA CGGT-GACG ATTAACCGCGGGTCC YPDSF_1770 1995293 - 1994406 - | chemotaxis methyltransferase CheR TERM 2165 1994554 - 1994530 - G 73 -6.4 -4.51799 | opp_overlap 1994531, overlap 1994531 AGCAAAGGTACAAAA CGACGCAGAA TGCGT TCCTGCGTCT CTTTATCAAAATAGA TERM 2166 1994553 - 1994531 - G 70 -9.9 -3.29995 | opp_overlap 1994531, overlap 1994530 GCAAAGGTACAAAAC GACGCAGAA TGCGT TCCTGCGTC TCTTTATCAAAATAG TERM 2167 1995364 - 1995396 + r 76 -10.7 -2.60808 | overlap 1995361 CTTTACAGCCACTTG TCGTTACTCGTGATG ACC CGTTACGAGTGATGA TCGATTGTCACTCCT YPDSF_1771 1997061 - 1995451 - | hypothetical protein YPDSF_1772 1998918 - 1997245 - | methyl-accepting chemotaxis protein TERM 2168 1997941 - 1997953 + g 71 -6.9 -4.16251 | overlap 1997952 CAATGCTAATTGACT CGCCT GAC GGGCG TTTTCAGCGTTCTGT TERM 2169 1998518 - 1998546 + g 70 -2.5 -5.03145 | opp_overlap 1998527, overlap 1998519 AGTTCGGTTAAGGCA CTAAAATATTCCT CGT AGGACTGTTTTAA TTTTTTGGCGCCTTC TERM 2170 1998895 - 1998877 - G 70 -8.9 -3.51158 | ACCAAATAATACTAA TACCAGC AGCAG GCTGGTA ACCACTTTCATACGC YPDSF_1773 1999797 - 1999159 - | hypothetical protein TERM 2171 1999337 - 1999347 + g 76 -6.8 -4.55689 | CGGAAGATATCGGCC GGTG TAG CACC TTTTCTGTGAATAGT YPDSF_1774 2002805 - 1999929 - | integral membrane protein TERM 2172 2001012 - 2000987 - G 73 -5.4 -4.70319 | gap 1 GTACCAAAACTAAAA GCTGACCC-GC GAGCA GCAGGGTTAGC GTAACCTGGCTGAAA YPDSF_1775 2007139 - 2003333 - | hypothetical protein TERM 2173 2004557 - 2004577 + g 70 -11.1 -2.50816 | overlap 2004556 GTTCACCCGGACCGA GGTGGTGCC GGT GGCATCGCC GTTGATCACTAACCG TERM 2174 2007536 - 2007556 + r 89 -12.7 -2.73875 | overlap 2007534 CATATTAATGTTACT TCGCCATAA AAT TTATGGCGA TACTATTCGGCCAAC YPDSF_1776 2008279 - 2007614 - | putative DNA-binding protein TERM 2175 2008749 - 2008769 + G 82 -11.9 -3.62597 | opp_overlap 2008736 2008737 AAGCCGTGCAATTTG CATCTGCAC TGG GTGCGGATG TTATTCGAACCTACA YPDSF_1777 2008469 - 2009455 + | hypothetical protein YPDSF_1778 2009452 - 2009829 + | YjgF-family lipoprotein TERM 2176 2010284 - 2010294 + G 70 -2.4 -5.05606 | ATGTACTTATCGCTT CTGG TGC CCTG TTTGTTTTTGTTCAG YPDSF_1779 2009842 - 2011077 + | membrane protein TERM 2177 2011145 - 2011115 - T 81 -9.6 -3.87075 | opp_overlap 2011114 2011113 2011115 2011118, overlap 2011118 ATGACTTGTCATAAA GAACCGCCCGAGCA ATA TGCAATGGCGGTTC AGTTCTTTATTTCAG YPDSF_1780 2011866 - 2011369 - | purine-binding chemotaxis protein TERM 2178 2011409 - 2011419 + g 79 -6.8 -4.70659 | AACGACATCTCTTCA CTGC TCA GCAG TTTTTCGATATCAAC YPDSF_1781 2014194 - 2012029 - | chemotaxis protein CheA TERM 2179 2012340 - 2012304 - G 74 -10.1 -3.55084 | overlap 2012302 2012336 TTTTAACATCAAAGA CGCGGTACAATTCAACC AAT GGTAGAAATTCACCGCG AACTTGCAGCACGCG TERM 2180 2013658 - 2013678 + g 71 -11.1 -2.7535 | opp_overlap 2013654 2013653, overlap 2013654 CAAACGAATACGCAT CCCGCCTTG AAG CAACGCGGG TGATGTGTTGCCAGC TERM 2181 2014181 - 2014168 - G 76 -3.1 -5.14563 | TGCTTCATCAAAAAA CGTCT GATA AAACG CGGTAATATCCATGC motB 2015512 - 2014211 - | flagellar motor protein MotB TERM 2182 2014632 - 2014654 + g 70 -2.6 -5.03994 | opp_overlap 2014637, overlap 2014633 ACCGTCCCGTGAGTA TCAATCTGCT TTA AGCCGGTTGC TTTTTCTATATCCAG TERM 2183 2014935 - 2014957 + g 73 -11.4 -3.00476 | overlap 2014940 AGGTCATCGGTGTGA CCGGATAAAC TGA GTTTATTCGG TATGTCATTCAGGAT YPDSF_1783 2016396 - 2015509 - | flagellar motor protein MotA TERM 2184 2015673 - 2015687 + g 79 -8.6 -4.40993 | ACAGCAGAGTCACTT TGATGC ATT GCATCA TTTTGGTCGTTTCTG YPDSF_1784 2017182 - 2016601 - | transcriptional activator FlhC YPDSF_1785 2017537 - 2017280 - | hypothetical protein TERM 2185 2017599 - 2017575 - R 78 -7.3 -4.45168 | GTTTTAAAACATAAA TTGAATGACAA AAT TTATCACTCAA AACCAGGGATCCTTC TERM 2186 2018691 - 2018651 - R 71 -9.1 -3.36569 | opp_overlap 2018655 2018657, overlap 2018649 2018653 2018655 CTAATCTTTTAAATA CACACACTATTCCAGGG CAGCCAC CCCCGGAATAGTGTCTT GAGATCAACCAGGCT TERM 2187 2018689 - 2018653 - R 86 -11.7 -3.24976 | opp_overlap 2018655 2018657, overlap 2018651 2018649 2018655 AATCTTTTAAATACA CACACTATTCCAGGG CAGCCAC CCCCGGAATAGTGTC TTGAGATCAACCAGG TERM 2188 2018687 - 2018655 - R 100 -14.3 -3.18571 | opp_overlap 2018655 2018657, overlap 2018653 2018651 2018649 TCTTTTAAATACACA CACTATTCCAGGG CAGCCAC CCCCGGAATAGTG TCTTGAGATCAACCA TERM 2189 2018655 - 2018687 + r 86 -12.1 -3.05844 | opp_overlap 2018655 2018653 2018651 2018649, overlap 2018657 TCTTTTAAATACACA CACTATTCCAGGG CAGCCAC CCCCGGAATAGTG TCTTGAGATCAACCA YPDSF_1786 2021424 - 2018725 - | Mg(2+) transport ATPase protein B TERM 2190 2020382 - 2020401 + g 71 -7.8 -4.11484 | opp_overlap 2020371, overlap 2020383 ACCACGACTTTACGC CGGGCCAT CGCG ATGGCCCC TTTTGCCAGATTAGA TERM 2191 2020383 - 2020400 + g 74 -11.3 -3.06569 | overlap 2020382 CCACGACTTTACGCC GGGCCAT CGCG ATGGCCC CTTTTGCCAGATTAG YPDSF_1787 2022523 - 2021825 - | Mg(2+) transport ATPase protein C TERM 2192 2024000 - 2023987 - gH 77 -4.5 -5.055 | GCAAGGCCTAAAAAA TGCAG AAGG CCGCA TAGCTCAGTCACAGC TERM 2193 2024663 - 2024634 - gH 76 -7.9 -4.1822 | gap 1, overlap 2024635 CTTCACTTGAACAAA CTGCGGCCAGCATG GAG CA-ACTGACCGCAA CCGTGAAACAGAATG TERM 2194 2024662 - 2024635 - gH 72 -9.2 -3.10611 | gap 1, overlap 2024634 TTCACTTGAACAAAC TGCGGCCAGCATG GAG CA-ACTGACCGCA ACCGTGAAACAGAAT YPDSF_1788 2023649 - 2024968 + | hypothetical protein YPDSF_1789 2024922 - 2025383 + | methyl-accepting chemotaxis protein III (MCP-III TERM 2195 2025486 - 2025515 + T 100 -8 -5.252 | gap 2, opp_overlap 2025486 GATAAAAAGCAAAAA CCGGAGGATAAGGT ATGA ACCTT--CCTCCGG TTTTTTATCGCAATA TERM 2196 2025515 - 2025486 - T 95 -8 -5.2197 | gap 2, opp_overlap 2025486 GATAAAAAGCAAAAA CCGGAGGATAAGGT ATGA ACCTT--CCTCCGG TTTTTTATCGCAATA YPDSF_1790 2025757 - 2025566 - | hypothetical protein TERM 2197 2025945 - 2025932 - R 100 -9.5 -5.25893 | opp_overlap 2025932 ACAGACAGTAAAAAA CCCGC CTTA GCGGG TTTTTTTATAATCAG TERM 2198 2025932 - 2025945 + r 100 -9.5 -5.67063 | opp_overlap 2025932 ACAGACAGTAAAAAA CCCGC CTTA GCGGG TTTTTTTATAATCAG YPDSF_1791 2026184 - 2025972 - | cold shock protein TERM 2199 2026520 - 2026535 + H 70 -2.5 -5.07567 | AAATTGTTATCTCTT CGTAG TGCGCC CTGCG TTTTTTGGCCTCTCA TERM 2200 2028449 - 2028467 + G 89 -10.2 -4.42806 | GGCATTTCGTCAGTA CCCGCGCT TAC AGGGCGGG TTTATTTGGGACTGG lacZ 2026725 - 2029907 + | beta-D-galactosidase TERM 2201 2030093 - 2030111 + F 100 -11 -5.9003 | opp_overlap 2030092 CTTTGCAAAATTTAC GCGCTCAT CCT ATGGGCGC TTTTTTTGTTCCTTT TERM 2202 2030177 - 2030189 + F 71 -2 -5.15969 | TGATAGTTACGCACG TTCA CTCTA TGAA TTTTTTCCATTACAC YPDSF_1793 2030314 - 2031324 + | Zinc-binding dehydrogenase TERM 2203 2031469 - 2031449 - f 76 -9.7 -3.37879 | opp_overlap 2031428, overlap 2031439 AGCAAGGGCAACTAA CCCCCTTCA TCT TGAAGGGCG ACGGGTATAAAGGGT YPDSF_1794 2031607 - 2032140 + | hypothetical protein YPDSF_1795 2032228 - 2032383 + | hypothetical protein TERM 2204 2032933 - 2032944 + G 70 -2.2 -5.03747 | GTGTGACAAAATAAC CGGT GATG ACTG TTTTTTGAGCCGTTT YPDSF_1796 2032646 - 2033095 + | transcription regulator AsnC YPDSF_1797 2033187 - 2034086 + | hypothetical protein YPDSF_1798 2034389 - 2034592 + | hypothetical protein TERM 2205 2034717 - 2034752 + T 91 -5.5 -5.60993 | gap 2 TGCCGGTATTTATTT GCCGGGTCTGGCCTA CCTTTTAT TGGGCCA--CCCGGC TTTTTTTATGACAGC YPDSF_1799 2036219 - 2034894 - | phosphoanhydride phosphorylase TERM 2206 2035502 - 2035520 + g 82 -8.1 -4.51847 | opp_overlap 2035497, overlap 2035514 TCGATGATAACGCCA GTGGCCC ACTGA GGGTCAC TTTTGTCCCTTCTTT YPDSF_1800 2036431 - 2036523 + | hypothetical protein YPDSF_1801 2036714 - 2036520 - | hypothetical protein YPDSF_1802 2037158 - 2036751 - | hypothetical protein YPDSF_1803 2037294 - 2038151 + | hypothetical protein YPDSF_1804 2039071 - 2040651 + | methyl-accepting chemotaxis protein YPDSF_1805 2040771 - 2041031 + | hypothetical protein TERM 2207 2041085 - 2041104 + F 79 -7.8 -4.3129 | overlap 2041086 TTCCTCAATACATTC AGCCCTCA ATAT TGAGGGCG TTTTACTGCTGCCTG TERM 2208 2041086 - 2041103 + F 84 -11.3 -3.18292 | overlap 2041085 TCCTCAATACATTCA GCCCTCA ATAT TGAGGGC GTTTTACTGCTGCCT TERM 2209 2041581 - 2041591 + G 79 -6.8 -4.72986 | CTGCCCGAGAGTTTG GCTG GAA CAGC TTTTTAGTGAACCTA YPDSF_1806 2041307 - 2042350 + | LacI family sucrose operon repressor TERM 2210 2042484 - 2042443 - T 100 -14.7 -3.54 | opp_overlap 2042450, overlap 2042444 2042446 2042450 AGCACGCCATAAATA GTATAAACTTCACGAAAGC ATAA GCCCTCGTGAAGTTTATAG ATACGTCAGAACTAC TERM 2211 2042483 - 2042444 - T 100 -18.2 -2.71918 | opp_overlap 2042450, overlap 2042443 2042446 2042450 GCACGCCATAAATAG TATAAACTTCACGAAAGC ATAA GCCCTCGTGAAGTTTATA GATACGTCAGAACTA TERM 2212 2042481 - 2042446 - T 100 -16.4 -2.90065 | opp_overlap 2042450, overlap 2042444 2042443 2042450 ACGCCATAAATAGTA TAAACTTCACGAAAGC ATAA GCCCTCGTGAAGTTTA TAGATACGTCAGAAC TERM 2213 2042477 - 2042450 - T 100 -12.8 -4.12037 | opp_overlap 2042450, overlap 2042446 2042444 2042443 CATAAATAGTATAAA CTTCACGAAAGC ATAA GCCCTCGTGAAG TTTATAGATACGTCA TERM 2214 2042450 - 2042477 + T 77 -8.4 -3.92869 | opp_overlap 2042446 2042444 2042443 2042450 CATAAATAGTATAAA CTTCACGAAAGC ATAA GCCCTCGTGAAG TTTATAGATACGTCA YPDSF_1807 2043749 - 2042496 - | isocitrate dehydrogenase TERM 2215 2043823 - 2043845 + H 83 -12 -2.80113 | TGAATATTCGTTCCG CGCCAATCCG AAA CGGATTGGGG TATAATGCGCTAATC TERM 2216 2043952 - 2043970 + G 74 -9.5 -3.57389 | overlap 2043950 GCCAGGCAGTCCCCC CCCGCTG CGCCA CGGCGGG TATTGTTATTCAATA YPDSF_1808 2043880 - 2044506 + | pseudouridine synthase TERM 2217 2044603 - 2044586 - g 70 -2.6 -5.00339 | overlap 2044587 ATCAACAATGAAAAA CGCTGG AACCAG CCAGCC GGTCATCTGGAAGCC YPDSF_1809 2044499 - 2044945 + | hypothetical protein TERM 2218 2045182 - 2045156 - g 82 -3.5 -5.30686 | opp_overlap 2045162, overlap 2045158 AATAGCCAGAAAAAA GTCATCGTCGG CATGT CCGGCGGTGTC GACTCTTCCGTTTCC TERM 2219 2045566 - 2045550 - g 71 -6.5 -4.13945 | opp_overlap 2045549 ATGTTGATGGTAAAA GCCGC CTACTGC GCGGC CTTGATGGAAATAAA trmU 2045132 - 2046247 + | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase YPDSF_1811 2046305 - 2046931 + | hypothetical protein YPDSF_1812 2046992 - 2048362 + | adenylosuccinate lyase TERM 2220 2048374 - 2048419 + F 100 -13 -3.34192 | gap 1, opp_overlap 2048377 2048379, overlap 2048377 GTAATATTCTTTATC TAATACAGGTGGC-TTAGTTT GGTAA AAGCTAACGCCATCTGTATTA TTCCTTCCCCCCCTT TERM 2221 2048377 - 2048416 + F 86 -10.3 -3.81146 | gap 1, opp_overlap 2048377 2048379, overlap 2048374 ATATTCTTTATCTAA TACAGGTGGC-TTAGTTT GGTAA AAGCTAACGCCATCTGTA TTATTCCTTCCCCCC TERM 2222 2048716 - 2048696 - g 74 -6.9 -4.42386 | GTTTGACCGACAAAA TTATAGCCA TAT TGGCAATAA AAATATGGGTGGGAT YPDSF_1813 2048550 - 2049173 + | lipoprotein YPDSF_1814 2049384 - 2050055 + | DNA-binding transcriptional regulator PhoP TERM 2223 2050906 - 2050893 - g 76 -8.1 -4.13014 | CTCACAGCCTTAAAA CACCG CTGG CGGTG CTACAAACCACACTA YPDSF_1815 2050061 - 2051515 + | sensor protein PhoQ YPDSF_1816 2051545 - 2052720 + | hypothetical protein TERM 2224 2052940 - 2052910 - T 93 -11.9 -3.62046 | opp_overlap 2052917, overlap 2052911 2052917 GCACTTTGTCAATAA CCTCAAACGCCCC TTTTC GGGGCGTTTCAGA CTGCTGACAAACCCC TERM 2225 2052939 - 2052911 - T 91 -13.2 -2.77013 | opp_overlap 2052917, overlap 2052910 2052917 CACTTTGTCAATAAC CTCAAACGCCCC TTTTC GGGGCGTTTCAG ACTGCTGACAAACCC TERM 2226 2052933 - 2052917 - T 84 -10.8 -3.72051 | opp_overlap 2052917, overlap 2052911 2052910 GTCAATAACCTCAAA CGCCCC TTTTC GGGGCG TTTCAGACTGCTGAC TERM 2227 2052917 - 2052933 + T 84 -10.8 -3.58343 | opp_overlap 2052911 2052910 2052917 GTCAATAACCTCAAA CGCCCC TTTTC GGGGCG TTTCAGACTGCTGAC TERM 2228 2053024 - 2052998 - T 84 -10.1 -3.82218 | gap 1, opp_overlap 2053007, overlap 2052999 2053014 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 2229 2053025 - 2052999 - T 72 -10.1 -2.88849 | gap 1, opp_overlap 2053007, overlap 2052998 2053014 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT TERM 2230 2053105 - 2053121 + T 93 -10.8 -4.1897 | opp_overlap 2053105 GTCAATAACCTCAAA CGCCCC TTTTC GGGGCG TTTCTCTCTATCGTT TERM 2231 2053121 - 2053105 - T 84 -10.8 -3.72051 | opp_overlap 2053105 GTCAATAACCTCAAA CGCCCC TTTTC GGGGCG TTTCTCTCTATCGTT YPDSF_1817 2054376 - 2053141 - | peptidase T TERM 2232 2053963 - 2053973 + g 71 -6.8 -4.14739 | CGCTTTATCATCCGC CCCT AAC AGGG TTTTACCATCAGTCG YPDSF_1818 2055542 - 2054706 - | NAD-dependent deacetylase TERM 2233 2055579 - 2055593 + r 85 -7.2 -4.83615 | TATCTGTCTTGTTAT TAATCG TGA CGATTA TTTTTCTGCCAAATG YPDSF_1819 2055758 - 2055591 - | hypothetical protein YPDSF_1820 2056506 - 2055736 - | N-acetyl-D-glucosamine kinase TERM 2234 2056139 - 2056107 - G 70 -9.8 -3.2327 | opp_overlap 2056110, overlap 2056096 2056110 2056126 TTAACCCACCACCAA CACCGGTGCCGAGA ATAAG CCCCAGCACCGTTG GGTAAGTGCGAAACT YPDSF_1821 2057772 - 2056525 - | outer membrane-specific lipoprotein transporter subunit LolE TERM 2235 2057210 - 2057196 - G 70 -4.2 -4.62783 | CACTCAGTTGAAAAA TACCGG CAA CCTGTA AACGGATGCGCTTAG lolD 2058476 - 2057772 - | lipoprotein transporter ATP-binding subunit YPDSF_1823 2059671 - 2058469 - | outer membrane-specific lipoprotein transporter subunit LolC TERM 2236 2059197 - 2059181 - G 77 -10.1 -3.78775 | opp_overlap 2059181 CTCGGTACCATCAAA CGCAGTG TTT CACCGCG TTTAACCCCGAGCTG TERM 2237 2059616 - 2059600 - G 90 -10.1 -4.5123 | AAGCCACGAAACAAA CCGACCG AAG CGGTCAG AAGCACGCCCACGCA TERM 2238 2061916 - 2061894 - g 71 -6.3 -4.34486 | gap 1, overlap 2061891 2061896 ACCAATAATAAACAA GTGGCGGTGT TGGT AC-CCACCAC CCTGCTGGCTCAACA YPDSF_1824 2059941 - 2063387 + | transcription-repair coupling factor YPDSF_1825 2064165 - 2063626 - | hypothetical protein TERM 2239 2064294 - 2064312 + r 70 -7.3 -3.85698 | TAAAATACCGGGATA CGGCGTG CGTGA CTCGCCG TTTGTAAACACAGGG TERM 2240 2064521 - 2064500 - R 84 -10.1 -3.74693 | TGCCACCGTATTAAA GGTGATCGC TCAG GCGGTCACC GAACTCGATAATAAA YPDSF_1826 2065703 - 2064495 - | transposase for the IS285 insertion element YPDSF_1827 2066212 - 2065799 - | hypothetical protein YPDSF_1828 2066708 - 2066220 - | hypothetical protein YPDSF_1829 2067156 - 2066962 - | hypothetical protein TERM 2241 2067203 - 2067224 + r 95 -13.1 -3.15663 | overlap 2067219 TGCTAGCCCGCAGGG TGAGCCTCA CGAA TGAGGCTCA TTAATCCCGATGAGT YPDSF_1830 2068631 - 2067327 - | NADH dehydrogenase TERM 2242 2068339 - 2068351 + g 82 -7.7 -4.6313 | opp_overlap 2068338 TGTTCATCACAAATC TCAGC CAG GCTGA TTGTTTTGTTTTCAC YPDSF_1831 2069548 - 2069006 - | hypothetical protein YPDSF_1832 2070695 - 2069676 - | beta-hexosaminidase TERM 2243 2070809 - 2070797 - R 86 -7.7 -4.68919 | AAAGACAAATTAAAA CGTTG GCG CAACG GCGCGGCCCATGCCA YPDSF_1833 2071644 - 2070778 - | hypothetical protein TERM 2244 2071452 - 2071472 + g 76 -7.6 -4.37658 | ATTTACGCTCACGTC GTCGGTTG ACCCC CAACTGAC TTTTGTGCGGCGATT TERM 2245 2071568 - 2071594 + g 74 -11.7 -2.72568 | gap 1, opp_overlap 2071568 2071571 2071572, overlap 2071567 2071565 ACCGGGCTAATATGA CAAT-CGGCGGT TTTC ACCGCCGGATTG ATGTTTGCTATTAAG TERM 2246 2071594 - 2071568 - G 74 -11.7 -2.73994 | gap 1, opp_overlap 2071568 2071567 2071565, overlap 2071571 2071572 ACCGGGCTAATATGA CAAT-CGGCGGT TTTC ACCGCCGGATTG ATGTTTGCTATTAAG TERM 2247 2071590 - 2071571 - G 70 -9.2 -3.52073 | opp_overlap 2071568 2071567 2071565, overlap 2071568 2071572 GGGCTAATATGACAA TCGGCGGT TTTC ACCGCCGG ATTGATGTTTGCTAT TERM 2248 2071589 - 2071572 - G 76 -12.7 -2.70923 | opp_overlap 2071568 2071567 2071565, overlap 2071571 2071568 GGCTAATATGACAAT CGGCGGT TTTC ACCGCCG GATTGATGTTTGCTA YPDSF_1834 2072200 - 2071625 - | putative lipoprotein TERM 2249 2072272 - 2072260 - R 78 -10.5 -3.34428 | overlap 2072258 2072256 2072254 AAAAATAAATAGAGA CGCGC ACT GCGCG CATTAAAATTATTGT YPDSF_1835 2072630 - 2072241 - | putative lipoprotein YPDSF_1836 2073018 - 2072665 - | purine nucleoside phosphoramidase YPDSF_1837 2074010 - 2073192 - | shikimate 5-dehydrogenase TERM 2250 2074379 - 2074347 - R 100 -11.3 -4.42806 | opp_overlap 2074354, overlap 2074351 2074353 2074354 TTAGTTTGAAATAAA TAAATATCCTCCGGC ATA GCCGGAGGTTTTTCA TATGCGCCTATAAGG TERM 2251 2074375 - 2074351 - R 100 -9.9 -4.78326 | opp_overlap 2074354, overlap 2074347 2074353 2074354 TTTGAAATAAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCATATGCGCCTAT TERM 2252 2074373 - 2074353 - R 100 -12.5 -3.99693 | opp_overlap 2074354, overlap 2074351 2074347 2074354 TGAAATAAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 2253 2074354 - 2074372 + r 100 -16 -4.8048 | opp_overlap 2074354 2074353 2074351 2074347 GAAATAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 2254 2074372 - 2074354 - R 100 -16 -2.98189 | opp_overlap 2074354, overlap 2074353 2074351 2074347 GAAATAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC YPDSF_1838 2074911 - 2074453 - | transposase for the IS1541 insertion element TERM 2255 2075042 - 2075024 - R 100 -16 -3.07307 | opp_overlap 2075024 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAT TERM 2256 2075024 - 2075042 + r 100 -16 -4.37092 | opp_overlap 2075024 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAT TERM 2257 2075061 - 2075078 + r 100 -12.7 -4.35116 | opp_overlap 2075061 TCTGGGCACAATAAA GGGAGGC TTTC GCCTCCC TTTTGCTCTCCCCTA TERM 2258 2075078 - 2075061 - R 100 -12.7 -4.30719 | opp_overlap 2075061 TCTGGGCACAATAAA GGGAGGC TTTC GCCTCCC TTTTGCTCTCCCCTA YPDSF_1839 2076534 - 2075101 - | glucose-specific PTS system IIBC components TERM 2259 2076738 - 2076712 - R 73 -7.3 -4.15044 | opp_overlap 2076712 2076715 GTTTCTTTCAAGAAA GCACGTAATCC CTCTC GGATTTCGTAC TTTACGTAAAGAAAC YPDSF_1840 2077649 - 2076840 - | putative metallodependent hydrolase YPDSF_1841 2078686 - 2077664 - | DNA polymerase III subunit delta' TERM 2260 2078071 - 2078028 - G 71 -7.3 -4.03413 | opp_overlap 2078028 2078056, overlap 2078063 AGCCCGCTACACAAA GCGCTGCGGATACTCCAAC GCTCTG GTTGGAGCAACCGCTCAGC CGCCAGCGGTGCGCC TERM 2261 2078224 - 2078211 - G 78 -3.7 -5.17744 | overlap 2078213 2078214 AGATACCAATAAAAA CAGCG GCTA CGCAG TGTAGCCAGCAAGCT TERM 2262 2078234 - 2078213 - G 71 -6.6 -4.20491 | gap 1, overlap 2078211 2078214 ATACCAATAAAAACA GC-GGCTAC GCAGT GTAGCCAGC AAGCTGGCGGGTTGG tdk 2079324 - 2078686 - | thymidylate kinase TERM 2263 2079241 - 2079275 + g 74 -7.8 -4.18762 | gap 1, overlap 2079237 GTTAATCCCTTGGGC CCGCAGCACCGCGAC CACGGT GTCGCGG-GTGGTGG TTTTCCCTGCCCCTT YPDSF_1843 2080339 - 2079314 - | hypothetical protein TERM 2264 2080495 - 2080469 - R 84 -10.1 -3.8381 | gap 1, opp_overlap 2080478, overlap 2080470 2080485 AGACAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 2265 2080496 - 2080470 - R 72 -10.1 -2.89563 | gap 1, opp_overlap 2080478, overlap 2080469 2080485 GACAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT YPDSF_1844 2081414 - 2080608 - | 4-amino-4-deoxychorismate lyase TERM 2266 2081752 - 2081728 - R 100 -9.9 -4.50761 | opp_overlap 2081731, overlap 2081730 2081731 ATGAATTTAAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCATATGCGCCTAT TERM 2267 2081750 - 2081730 - R 100 -12.5 -3.8535 | opp_overlap 2081731, overlap 2081728 2081731 GAATTTAAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 2268 2081749 - 2081731 - R 100 -16 -2.90126 | opp_overlap 2081731, overlap 2081730 2081728 AATTTAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 2269 2081731 - 2081749 + r 100 -16 -4.8048 | opp_overlap 2081730 2081728 2081731 AATTTAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC YPDSF_1845 2082288 - 2081830 - | transposase for the IS1541 insertion element TERM 2270 2082401 - 2082419 + r 100 -16 -4.37092 | opp_overlap 2082401 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAT TERM 2271 2082419 - 2082401 - R 100 -16 -3.07307 | opp_overlap 2082401 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAT TERM 2272 2082462 - 2082434 - R 74 -9.6 -3.28712 | opp_overlap 2082439 2082441, overlap 2082439 GTTTTCTGGGCACAA TAAAAGACCCGG AAAAA CCGGGCCTTTTT AGCATCAGAACCTTA TERM 2273 2082439 - 2082457 + r 81 -7.3 -4.62069 | opp_overlap 2082439 2082434, overlap 2082441 CTGGGCACAATAAAA GACCCGG AAAAA CCGGGCC TTTTTAGCATCAGAA TERM 2274 2082457 - 2082439 - R 100 -9.5 -4.77165 | opp_overlap 2082439 2082441, overlap 2082434 CTGGGCACAATAAAA GACCCGG AAAAA CCGGGCC TTTTTAGCATCAGAA YPDSF_1846 2083729 - 2082488 - | 3-oxoacyl-(acyl carrier protein) synthase II TERM 2275 2083774 - 2083799 + r 86 -11.9 -2.91681 | opp_overlap 2083774 2083775 TTCGGACAAAAAAAA CTTAGGCGGTC GAAT GACCGCCTAAC TATCTAAACTTAAAG TERM 2276 2083799 - 2083774 - R 100 -11.9 -5.93809 | opp_overlap 2083774, overlap 2083775 TTCGGACAAAAAAAA CTTAGGCGGTC GAAT GACCGCCTAAC TATCTAAACTTAAAG TERM 2277 2083798 - 2083775 - R 100 -15.4 -4.15201 | opp_overlap 2083774, overlap 2083774 TCGGACAAAAAAAAC TTAGGCGGTC GAAT GACCGCCTAA CTATCTAAACTTAAA acpP 2084060 - 2083824 - | acyl carrier protein fabG 2084948 - 2084214 - | 3-ketoacyl-(acyl-carrier-protein) reductase YPDSF_1849 2085891 - 2084962 - | malonyl CoA-acyl carrier protein transacylase YPDSF_1850 2086879 - 2085929 - | 3-oxoacyl-(acyl carrier protein) synthase III TERM 2278 2086323 - 2086311 - G 70 -9.1 -3.63627 | overlap 2086320 TCTGGATACGGTAAA GCGAG CAA CTCGC CATAACGACCATCAG TERM 2279 2086437 - 2086412 - G 74 -9.9 -3.57263 | gap 1, opp_overlap 2086418, overlap 2086417 AGCGCCATCGCCAAA CAGAATGATCGT ACC ACGATC-TTCTG GATCCAATGCACGGG YPDSF_1851 2087920 - 2086886 - | putative glycerol-3-phosphate acyltransferase PlsX rpmF 2088121 - 2087954 - | 50S ribosomal protein L32 YPDSF_1853 2088658 - 2088134 - | hypothetical protein TERM 2280 2088352 - 2088398 + g 70 -11.6 -2.69471 | overlap 2088351 GCTCGTACGCTTCCG GTAATGCTTCAGCCTGCTCATC ATT GACGATCGGGCTGAAACAATAC GTTGTATGAACATGG YPDSF_1854 2088788 - 2089396 + | Maf-like protein TERM 2281 2089473 - 2089451 - T 100 -10.5 -5.09204 | opp_overlap 2089450 2089449 2089451 ACAGTCGAATAAAAA CGGGGCGCA TGCTG TGCCCCCCG CCTTTTATGATCATC TERM 2282 2089451 - 2089473 + T 76 -11.2 -2.56836 | opp_overlap 2089451, overlap 2089450 2089449 ACAGTCGAATAAAAA CGGGGCGCAT GCT GTGCCCCCCG CCTTTTATGATCATC YPDSF_1855 2090481 - 2089519 - | 23S rRNA pseudouridylate synthase C TERM 2283 2089765 - 2089782 + g 70 -9.1 -3.53811 | overlap 2089764 GATTTGATGCGTCCG GCCAGTC ACTG GGCTGGC TTTAACCAGCGTGGC TERM 2284 2091658 - 2091644 - g 76 -2.7 -5.15634 | opp_overlap 2091650 2091653, overlap 2091646 GATGCGATTAAAAAA GCGGC TGAAG GTCGC CCCGCGCCCTTCTTA TERM 2285 2091650 - 2091670 + G 74 -11.1 -3.18264 | opp_overlap 2091644 2091646, overlap 2091653 ATTAAAAAAGCGGCT GAAGGTCGC CCC GCGCCCTTC TTAATCCATCAGGAA TERM 2286 2092296 - 2092316 + G 71 -6.1 -4.28791 | GTACCGGCACCGTAC GTGACAATG AAT CGCTGTCAC TTTCTATTCTGCGTT TERM 2287 2093614 - 2093628 + G 74 -7.8 -4.18018 | opp_overlap 2093607 GGCACAATCGGCCAT GCCTCT GGC AGGGGC TTTTGCCTCACCAGA TERM 2288 2093894 - 2093871 - g 80 -12.4 -3.43203 | overlap 2093868 2093867 2093865 TTATGACAACACCAA CCGTTGCGGT TGCC ACCGCAGCGG TAACACTGGCCCCAC rne 2091056 - 2094706 + | ribonuclease E TERM 2289 2094777 - 2094822 + T 100 -15 -4.62957 | gap 1, overlap 2094768 2094783 2094784 CACTTTCTCTGGCGG TTGACATGGCCTGAGTTCGGT ACTGC ACCGGACTCAGGCCGT-TTAA TTTTACTTTGATTCT YPDSF_1857 2094870 - 2094754 - | hypothetical protein TERM 2290 2094783 - 2094817 + g 100 -18.7 -4.29472 | overlap 2094768 2094777 2094784 CTCTGGCGGTTGACA TGGCCTGAGTTCGGT ACTGC ACCGGACTCAGGCCG TTTAATTTTACTTTG TERM 2291 2094784 - 2094816 + g 100 -20 -3.16056 | overlap 2094768 2094783 2094777 TCTGGCGGTTGACAT GGCCTGAGTTCGGT ACTGC ACCGGACTCAGGCC GTTTAATTTTACTTT YPDSF_1858 2095251 - 2094964 - | hypothetical protein YPDSF_1859 2095486 - 2096532 + | dihydroorotase YPDSF_1860 2096845 - 2097090 + | DNA damage-inducible protein I TERM 2292 2097343 - 2097365 + F 84 -5.4 -5.26875 | overlap 2097344 2097359 ACCACAATACCATTT TGCCGGGGAG TCG CTCCTCAGCC TTTTTTGCTTAAAAC TERM 2293 2097344 - 2097364 + F 78 -8.9 -3.75402 | overlap 2097343 2097359 CCACAATACCATTTT GCCGGGGAG TCG CTCCTCAGC CTTTTTTGCTTAAAA TERM 2294 2097543 - 2097522 - f 75 -7.3 -4.371 | TTGAGTATACTAAAA CAGCTCACT CGGT AATGAGCCG CATTGATCCTCGTTA TERM 2295 2097881 - 2097860 - g 77 -10.1 -3.74693 | TGCCACCGTATTAAA GGTGATCGC TCAG GCGGTCACC GAACTCGATAATAAA bssS 2097596 - 2097892 + | biofilm formation regulatory protein BssS YPDSF_1862 2099063 - 2097855 - | transposase for the IS285 insertion element TERM 2296 2099214 - 2099239 + H 95 -7.7 -5.06816 | gap 1, opp_overlap 2099214 2099212 TATTACCCATAAACA GGCACCAG-TAA ATA TTATCTGGTGTC TTTTTATTAACCACT solA 2099424 - 2100539 + | N-methyltryptophan oxidase YPDSF_1864 2100806 - 2101420 + | LuxR family regulatory protein TERM 2297 2101933 - 2101972 + T 100 -11.4 -4.37092 | overlap 2101934 TACCCCATTTTCGGT TCCTCAGGGCCGTAGG CCAATTAA CCAGTGGCCCTGAGGG TTTTCTAACCACCGT TERM 2298 2101934 - 2101971 + T 93 -12.7 -3.21934 | overlap 2101933 ACCCCATTTTCGGTT CCTCAGGGCCGTAGG CCAATTAA CCAGTGGCCCTGAGG GTTTTCTAACCACCG tqsA 2103050 - 2101992 - | putative transport protein YPDSF_1866 2104266 - 2103199 - | hypothetical protein YPDSF_1867 2104438 - 2104310 - | hypothetical protein YPDSF_1868 2105029 - 2104625 - | hypothetical protein YPDSF_1869 2105035 - 2105148 + | hypothetical protein YPDSF_1870 2105994 - 2105317 - | hypothetical protein TERM 2299 2105976 - 2105959 - G 71 -5.7 -4.34866 | ACCGAAGAAGACAAA CTTTTTA CTCG TAAAAAG AGAAGGACTGCGGTC YPDSF_1871 2106425 - 2107069 + | N-acylhomoserine lactone synthase YpeI YPDSF_1872 2107799 - 2107062 - | quorum-sensing transcriptional activator YpeR TERM 2300 2107252 - 2107264 + g 81 -6.3 -5.0095 | TCATTTTCCCGAGGA GAGAA AAT TTCTC TTTTATTCTCTTTTT TERM 2301 2107900 - 2107883 - R 85 -4.2 -5.52909 | CAAGATGTAAAAAAA TGTGAT CACTGC ATCACA TTCAAATTATTGACA TERM 2302 2108145 - 2108172 + r 91 -12.1 -3.47227 | opp_overlap 2108140 GCTCTATGAACTCCG CCATCTGGGTG CATTTA CATCCAGATGG TTGTGATGCTTACCC YPDSF_1873 2109212 - 2108286 - | LysR family transcriptional regulator TERM 2303 2109708 - 2109685 - g 84 -4.6 -5.32882 | gap 1 TACCATCAGAAAAAA TCAGGATGGAC GAT GTCC-CCCTAA ATCGCTTCCATATAA TERM 2304 2109834 - 2109807 - g 82 -11.4 -3.78409 | opp_overlap 2109802 TTAATTCAACTCAAA CCCATAATGGCA CTTA CACCATTATGGG AGGGATTACTCGGAT YPDSF_1874 2109660 - 2111018 + | transporter protein YPDSF_1875 2111065 - 2111568 + | hypothetical protein TERM 2305 2112572 - 2112582 + G 72 -8.2 -3.90762 | GCGCGGGAAGCTCGC CCGC CAA GCGG TATTTTTGCCCCATA YPDSF_1876 2111579 - 2112598 + | oxidoreductase TERM 2306 2112669 - 2112628 - T 71 -9.7 -2.71731 | gap 1 GTGATTCTTTAACTA TTGGCCAGTG-CAACATA AAATCAA TACGTTAACACTGGCCAA AAAGAATCAAAACCA YPDSF_1877 2113230 - 2112676 - | hypothetical protein YPDSF_1878 2114245 - 2113241 - | hypothetical protein TERM 2307 2113651 - 2113637 - G 76 -5.7 -4.62872 | ATCAACGGTGAAAAA GGCAA AACCG TTGCC CGCTAAACCTTGTTC TERM 2308 2114097 - 2114113 + g 84 -4.3 -5.34309 | overlap 2114098 2114099 TTCAACCGGTTGGAG ATGGTGC CCC GCACCGC TTTTTCTTTAATGAT YPDSF_1879 2115213 - 2114263 - | hypothetical protein YPDSF_1880 2116556 - 2115210 - | hypothetical protein YPDSF_1881 2120252 - 2116965 - | hypothetical protein TERM 2309 2117309 - 2117287 - G 70 -9 -3.54424 | CTGGATTGTCGGAAA GGGGTGCACC GTT GCTGCTCCCC ACTCCAGGTCGCCTG TERM 2310 2117420 - 2117432 + g 74 -7.7 -4.20454 | opp_overlap 2117419 2117420 AATCAACAAAATTAT CTCGA GGT TCGAG TTTGGTTCTTTCTTG TERM 2311 2117562 - 2117573 + g 70 -4.4 -4.67353 | TTTGCAATAAACGGG GATC GCCG GATC TTTTTGAGTCAGTGC YPDSF_1882 2121229 - 2120249 - | hypothetical protein TERM 2312 2122259 - 2122282 + H 74 -6.6 -4.28361 | AGGTGCCCCCCCTGC GCCCATAGCC TTTA GGCTAAGGCC TTTTAGTCAGATTGA YPDSF_1883 2122316 - 2123560 + | membrane protein TERM 2313 2124143 - 2124108 - T 86 -12 -3.14132 | opp_overlap 2124101 TGGCTGGTGTACTAA TGGTGCTCTGAAATAT AAAA ATAATTCAGAGCACCG GGGCTACTATTTACA YPDSF_1884 2125447 - 2124173 - | hypothetical protein TERM 2314 2125046 - 2125068 + g 73 -6.2 -4.59207 | opp_overlap 2125050 TGCACGCCATGTCCA CCAATTTGGC TCC GCCACACTGG TTTTATACTCTTTAT TERM 2315 2125239 - 2125222 - G 80 -3.3 -5.252 | overlap 2125223 GACGTTGATAAAAAA TTGCCGC GCGG GCGACAT CATCAATGGCGGATA YPDSF_1885 2126607 - 2125486 - | hypothetical protein TERM 2316 2125862 - 2125879 + g 70 -8.5 -3.75332 | opp_overlap 2125865 ATACCGGCGTGCACA TTATCGG CGAC CCGATAA TTTACATTAACAAGT TERM 2317 2126048 - 2126062 + g 87 -4.2 -5.52986 | overlap 2126046 CCAATATTGTTATCG CCGC CTGTCGT GCGG TTTTTTTCGTAGCCT TERM 2318 2126245 - 2126234 - G 78 -3.6 -5.14563 | TGCTTGAGTAAAAAA CCGG TATT CCAG CCCGTATCGCCAAAA TERM 2319 2126661 - 2126676 + r 76 -2.6 -5.38047 | overlap 2126658 2126662 GGGAACTCCACCCAA TCTAAT TGAT ATTAGG TTTTTTCTATAAATC YPDSF_1886 2127662 - 2126724 - | hypothetical protein YPDSF_1887 2128744 - 2127689 - | hypothetical protein TERM 2320 2128772 - 2128793 + r 83 -8.7 -4.16943 | opp_overlap 2128772 2128771 TATAAATAGCAATAT CGTGGTGAG TCAT TTCACCGCG TTTTCGAGTATCAAA YPDSF_1888 2129715 - 2128891 - | sugar ABC transporter, permease protein YPDSF_1889 2130591 - 2129716 - | sugar ABC transporter, permease protein TERM 2321 2130531 - 2130503 - G 70 -2.5 -4.90778 | gap 1, opp_overlap 2130511, overlap 2130511 GCGAGCCAAATAAAA GGATAAAACCAG AATATG CTGGTAT-ATCC CAGATAAGAGGCCGC YPDSF_1890 2131986 - 2130700 - | solute-binding protein TERM 2322 2132073 - 2132099 + H 70 -3.7 -4.79451 | opp_overlap 2132073 2132074 2132076, overlap 2132068 2132076 GCGTAATTTCGATAA TGATGTGAAGT ATTTC ACATCTCATCA TTTTATGTTTAACGT YPDSF_1891 2132258 - 2133298 + | LacI family transcriptional regulator YPDSF_1892 2133315 - 2134703 + | phosphomannomutase TERM 2323 2134776 - 2134743 - f 100 -14.7 -4.93177 | overlap 2134747 TAAAAACTAATAAAA TCAACCTCGCGTTCA TTAT TGAACGCGAGGGTAA ATAGCAGCATATTGT TERM 2324 2134772 - 2134747 - f 100 -17.7 -3.84772 | overlap 2134743 AACTAATAAAATCAA CCTCGCGTTCA TTAT TGAACGCGAGG GTAAATAGCAGCATA YPDSF_1893 2134803 - 2135882 + | mannitol transport ATP-binding protein YPDSF_1894 2136135 - 2136010 - | hypothetical protein YPDSF_1895 2136677 - 2136147 - | hypothetical protein YPDSF_1896 2137447 - 2136950 - | hypothetical protein YPDSF_1897 2138215 - 2138048 - | hypothetical protein TERM 2325 2138373 - 2138402 + r 95 -12.9 -3.16055 | gap 1, opp_overlap 2138377 2138378, overlap 2138361 2138378 ATCTTAGAGTTTGAA GCAAGCCCCAGCCA AAT TGGCCGGG-CTTGC TTCATCACGGGTTTC TERM 2326 2138398 - 2138377 - R 71 -8.7 -3.35371 | gap 1, opp_overlap 2138373 2138361 2138378, overlap 2138378 TAGAGTTTGAAGCAA GCCCCAGCCA AAT TGGCCGGG-C TTGCTTCATCACGGG YPDSF_1898 2138615 - 2138418 - | hypothetical protein YPDSF_1899 2140658 - 2138625 - | hypothetical protein TERM 2327 2138664 - 2138676 + g 73 -3.3 -5.00616 | overlap 2138665 GTTAGAAATATACTT ACCTG TTT CAGGA TTTTTTACACCAAAG TERM 2328 2140721 - 2140768 + r 100 -22.4 -3.18264 | gap 1 TATCGCTAGGCCCAA TGCCGATCAGTTAAGGATC-GGT TGA ACGAGATCCTTAACTGATCGGCA TTGCTGCATAGCAGG TERM 2329 2140832 - 2140800 - R 93 -12.1 -3.58726 | opp_overlap 2140803, overlap 2140803 GTTTTCTATAGACAA TAATTATCCTCCGGC ATA GTCGGGGGATAATTA TTCAAGGTTTAGGAT TERM 2330 2140829 - 2140803 - R 83 -9.4 -3.92996 | opp_overlap 2140803, overlap 2140800 TTCTATAGACAATAA TTATCCTCCGGC ATA GTCGGGGGATAA TTATTCAAGGTTTAG TERM 2331 2140803 - 2140829 + r 100 -13.8 -3.66772 | opp_overlap 2140800 2140803 TTCTATAGACAATAA TTATCCTCCGGC ATA GTCGGGGGATAA TTATTCAAGGTTTAG TERM 2332 2141049 - 2141035 - R 93 -2.8 -5.95539 | TCCTAAACAAAAAAA TACAGC CCA ACCGTA TAAGATAGCTAATAT YPDSF_1900 2141573 - 2141322 - | hypothetical protein YPDSF_1901 2142327 - 2141818 - | hypothetical protein TERM 2333 2142334 - 2142346 + r 71 -3.3 -5.02715 | overlap 2142335 CATATCCATATTATT TCACC TTC GGTGC TTTTTGGTTTGGTAT YPDSF_1902 2149876 - 2142329 - | hemolysin TERM 2334 2149094 - 2149108 + g 73 -9.2 -3.69092 | CACGGTTGGCCGCGG GCTGCC ATC GGCGGC TTTGGCGTTAATGTT YPDSF_1903 2151768 - 2150080 - | hemolysin activator protein YPDSF_1904 2153386 - 2152421 - | dioxygenase beta subunit TERM 2335 2152760 - 2152775 + g 80 -10.4 -3.69395 | ACCGCGTTGTGTTGC CGCCGT TTTA ACGGCG TTATTCAATGATACC TERM 2336 2153163 - 2153187 + g 100 -16.5 -3.53091 | GAATGCTCACTCAGG CGCACCGCTAT TTG GTAGCGGTGCG TTTCAAAAGGAGAAT TERM 2337 2153470 - 2153446 - R 100 -14.3 -3.54951 | TACGCTATCAGAGAA GACCCACAGCG GCT CACTGTGGGCC ATAATAATAGGCTAC YPDSF_1905 2154606 - 2153482 - | dioxygenase alpha subunit YPDSF_1906 2156204 - 2154723 - | putative transporter TERM 2338 2156754 - 2156720 - R 78 -10 -3.45031 | overlap 2156715 2156722 TTCTCAAAAAGTTAA TAGGCATTCGTCCGAT TAA AACGGACGCATACCCA AACCCGCCAACGCAG TERM 2339 2156752 - 2156722 - R 78 -10.4 -3.2916 | overlap 2156720 2156715 CTCAAAAAGTTAATA GGCATTCGTCCGAT TAA AACGGACGCATACC CAAACCCGCCAACGC TERM 2340 2156860 - 2156886 + r 72 -10.1 -2.88849 | gap 1, opp_overlap 2156849, overlap 2156855 2156861 ACATCCATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCTCTGCC TERM 2341 2156861 - 2156887 + r 84 -10.1 -3.82218 | gap 1, opp_overlap 2156849, overlap 2156855 2156860 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCTCTGCCT YPDSF_1907 2158083 - 2156986 - | tartrate dehydrogenase YPDSF_1908 2158174 - 2159115 + | LlysR family transcriptional regulatory protein TERM 2342 2159227 - 2159213 - f 74 -4.2 -5.08088 | AACGTGGAATAAAAA CTCAGG ACG CTTGAG AGGTAAAAATTACCC YPDSF_1909 2159362 - 2160366 + | LacI family transcriptional regulator YPDSF_1910 2161491 - 2160499 - | sugar transport system, permease protein TERM 2343 2162018 - 2161991 - R 73 -10.6 -2.54803 | opp_overlap 2161996, overlap 2161990 2161988 GTAACAGACCAATAC CGTGATCCAACG CCTG CGCTGGATTACG TAGCACGGTGGGCTG YPDSF_1913 2163936 - 2163019 - | sugar binding protein precursor YPDSF_1914 2165337 - 2164111 - | zinc-binding dehydrogenase TERM 2344 2165223 - 2165233 + g 71 -5.4 -4.56597 | overlap 2165217 GTATGGATACAATGT TGAC GTT GTCA TTTTTGAACAAACCA TERM 2345 2165712 - 2165702 - R 86 -6.8 -4.98672 | overlap 2165695 TTCAAAAAGACAAAA CGTC GGT GACG GTGAGAAATAAAAAA YPDSF_1915 2166642 - 2165920 - | hypothetical protein TERM 2346 2166422 - 2166435 + g 73 -5.3 -4.614 | opp_overlap 2166422, overlap 2166413 CCGTTGTGATAACAA TCATC TATA GATGA TTTTATATCCTTCAA YPDSF_1916 2167326 - 2166784 - | hypothetical protein TERM 2347 2167523 - 2167500 - R 100 -11 -4.81083 | GGTAACCATTAAAAA CCCCCAGC AAATCACG GCTGGGGG AAGATAAAAGCACGG YPDSF_1917 2168502 - 2167564 - | membrane protein TERM 2348 2168757 - 2168742 - R 100 -9 -5.82316 | opp_overlap 2168742 2168741 AGCAGGCAAAAAAAA TCCGCT CGAA AGCGGA CTTTTATCAGACACA ompX 2169342 - 2168818 - | outer membrane protein X TERM 2349 2170050 - 2170033 - g 76 -6.9 -4.57837 | ACATGTCGTTAAAAA CGGTGCC ATTA GGCATCG CTGTAGCACTGGAAT TERM 2350 2170387 - 2170398 + G 73 -5.8 -4.57755 | TCTTGCCCATTGCAC TGGC CGTC GCCA TTTTGTCTACTGCAT YPDSF_1919 2169747 - 2170634 + | threonine and homoserine efflux system YPDSF_1920 2170650 - 2171147 + | hypothetical protein TERM 2351 2171788 - 2171798 + G 70 -8.2 -3.65991 | overlap 2171787 TGGCTGCGGGCAACG GGGC TAC GCCC TTATCTTGCCCCCCT YPDSF_1921 2171170 - 2171946 + | trans-aconitate 2-methyltransferase YPDSF_1922 2172203 - 2172706 + | DNA starvation/stationary phase protection protein Dps TERM 2352 2172741 - 2172757 + F 76 -10.8 -2.71364 | opp_overlap 2172741 CTATTACGCTGAACA GGGCCG TTAAC CGGCCC TGCTTGCCGCCCTCC TERM 2353 2172757 - 2172741 - f 79 -10.8 -3.04792 | opp_overlap 2172741 CTATTACGCTGAACA GGGCCG TTAAC CGGCCC TGCTTGCCGCCCTCC TERM 2354 2173651 - 2173621 - g 78 -13.4 -2.65354 | opp_overlap 2173618, overlap 2173618 2173617 2173626 CGCAGTTGAAAGCGA CCCAAGGCGAAAAT GCG ATTGTCACCTTGGG CTATGCGTTAAATCC YPDSF_1923 2173026 - 2174153 + | hypothetical protein glnH 2174723 - 2175466 + | glutamine ABC transporter periplasmic protein glnP 2175501 - 2176157 + | glutamine ABC transporter permease protein TERM 2355 2176476 - 2176466 - gT 79 -6.8 -4.63218 | overlap 2176467 TTTGGCCCAACAAAA GTGC GTG GCAC ATCCAAGGAAGAGGC glnQ 2176067 - 2176876 + | glutamine ABC transporter ATP-binding protein TERM 2356 2176967 - 2176939 - T 95 -13.2 -3.05997 | opp_overlap 2176939, overlap 2176934 TGGCTAGAAATCACA CTGGCGGACATC TTACT GATACCCGCCAG TTTTTTATAGGCTAT TERM 2357 2176939 - 2176967 + T 100 -8.8 -5.26918 | opp_overlap 2176934 2176939 TGGCTAGAAATCACA CTGGCGGACATC TTACT GATACCCGCCAG TTTTTTATAGGCTAT YPDSF_1927 2178392 - 2177100 - | chemotactic transducer TERM 2358 2177260 - 2177272 + g 71 -6.3 -4.39989 | overlap 2177251 ATCGCGGCGGTAACC CCATT CTG AATGG TTTTAGTCATTTGCT TERM 2359 2178564 - 2178538 - H 72 -10.1 -2.88849 | gap 1, opp_overlap 2178546, overlap 2178537 2178553 2178554 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGAA TGGCGCGGTTCG AGCCTACATGGATGT YPDSF_1928 2178878 - 2178979 + | hypothetical protein YPDSF_1929 2180171 - 2179161 - | putative SAM-dependent methyltransferase TERM 2360 2180078 - 2180092 + g 91 -4.2 -5.63517 | overlap 2180080 AGCGATGACGATTTC GGGGAT GCA ATCCGC TTTTTTCTTTGGGGA YPDSF_1930 2180459 - 2180719 + | hypothetical protein YPDSF_1931 2180867 - 2180724 - | hypothetical protein TERM 2361 2180884 - 2180862 - G 70 -3.3 -4.78848 | CTTGGAAATACAAAA GCCCATCCG TTCAT CTTATGGGC TCAGACTGCTGACAA TERM 2362 2180973 - 2180947 - R 84 -10.1 -3.82218 | gap 1, opp_overlap 2180956, overlap 2180948 2180963 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 2363 2180974 - 2180948 - R 72 -10.1 -2.88849 | gap 1, opp_overlap 2180956, overlap 2180947 2180963 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT TERM 2364 2181052 - 2181074 + r 100 -9.1 -4.93296 | TTGTCAATAACCTCA GCCCATCCG TTCAT CTGATGGGC TTTTTCTGGTGGTGA YPDSF_1932 2182059 - 2181100 - | hypothetical protein YPDSF_1933 2183540 - 2182125 - | O-succinylbenzoic acid--CoA ligase TERM 2365 2182384 - 2182372 - G 73 -3.3 -4.93661 | ACAGGAATAACAAAA GCGTG CTG CACCC CTGAATACTGCAATA YPDSF_1934 2184499 - 2183528 - | O-succinylbenzoate synthase YPDSF_1935 2185356 - 2184499 - | naphthoate synthase TERM 2366 2184796 - 2184819 + g 78 -2.3 -5.24129 | GGCATCATATTGGCG GCACAGGAA CCAAAT TTCCCGCGC TTTTTTCTGGCCGAC YPDSF_1936 2186188 - 2185370 - | acyl-CoA thioester hydrolase YfbB TERM 2367 2185433 - 2185418 - G 72 -4 -4.84359 | gap 1, overlap 2185420 TGACTGTGACAAAAA TGC-CAG CAC CTGTGCA GCAAAAGCACCGGGA YPDSF_1937 2187888 - 2186185 - | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase YPDSF_1938 2189489 - 2188116 - | menaquinone-specific isochorismate synthase TERM 2368 2188261 - 2188295 + g 70 -9.2 -3.6502 | TGCTGCCCATCGACT CGCGCTGAACGCAGGG CCA CACTGAATTCAGTGCG TTTAAGTGACAAATA YPDSF_1939 2190655 - 2190011 - | hypothetical protein YPDSF_1940 2191518 - 2191210 - | hypothetical protein YPDSF_1941 2191702 - 2191869 + | hypothetical protein YPDSF_1942 2192043 - 2192225 + | hypothetical protein YPDSF_1943 2194312 - 2192444 - | phosphogluconate dehydratase TERM 2369 2192936 - 2192952 + g 71 -5.7 -4.4078 | AATAACCTGATGCTC CCGTGGC ACT GCCGAGG TTTTCATTACCGCCC TERM 2370 2193027 - 2193015 - G 73 -3.3 -4.91109 | CCCTGAGCAGAAAAA GGCTG TTC CAGAC TGGCGATCACCGTCG YPDSF_1944 2194837 - 2194322 - | hypothetical protein YPDSF_1945 2196183 - 2194867 - | sugar transporter TERM 2371 2195360 - 2195322 - G 89 -10.3 -4.40333 | gap 1, overlap 2195324 2195352 CGGAAATAACATAAA TACCGGCGGTGGTAGCCA CAAA TGGCAAC-ACCGCCAGAA TACCGACGGATGCCA TERM 2372 2195358 - 2195324 - G 85 -12.9 -3.79177 | gap 1, overlap 2195322 2195352 GAAATAACATAAATA CCGGCGGTGGTAGCCA CAAA TGGCAAC-ACCGCCAG AATACCGACGGATGC TERM 2373 2196470 - 2196499 + r 76 -10.8 -2.50195 | overlap 2196469 2196467 ATAATTTTCGATTGA CGCGTCAGATAA ACTTTA TTTTCTGACGCG CTATTACTCATGGAT TERM 2374 2196536 - 2196523 - R 70 -5.3 -4.50058 | CATGGATAACTAAAA TCACT AAAG AGTGA TTGAGGTTATTGACA TERM 2375 2196615 - 2196641 + r 72 -10.1 -2.88849 | gap 1, opp_overlap 2196604, overlap 2196610 2196616 ACATCCATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCTCTGCC TERM 2376 2196616 - 2196642 + r 84 -10.1 -3.82218 | gap 1, opp_overlap 2196604, overlap 2196610 2196615 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCTCTGCCT YPDSF_1946 2197679 - 2196729 - | D-isomer specific 2-hydroxyacid dehydrogenase family protein TERM 2377 2197915 - 2197898 - R 80 -2.7 -5.44721 | overlap 2197901 ACCATGTTAAAAAAA CATGTTA CCGG TAACGTG ACCAGCTTATCATTA TERM 2378 2198141 - 2198113 - R 73 -5.3 -4.72272 | opp_overlap 2198118, overlap 2198118 CGTGGTGATGAAAAA TAACAGGAAACCG AAT CGACTTCCCTTTA GTCTCAGATAGTCCC TERM 2379 2198136 - 2198118 - R 70 -7.4 -3.84027 | opp_overlap 2198118, overlap 2198113 TGATGAAAAATAACA GGAAACCG AAT CGACTTCC CTTTAGTCTCAGATA YPDSF_1947 2199137 - 2198145 - | LacI family transcriptional regulator TERM 2380 2199273 - 2199292 + H 80 -10.6 -3.5511 | overlap 2199272 CGGCAGTTACACCGT CGGGAGGG GATG CCCGCCCG TATTTCTCAATGGCA YPDSF_1948 2199606 - 2200889 + | putative lipoprotein TERM 2381 2201534 - 2201508 - f 84 -10.1 -3.82218 | gap 1, opp_overlap 2201517, overlap 2201509 2201524 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 2382 2201535 - 2201509 - f 72 -10.1 -2.88849 | gap 1, opp_overlap 2201517, overlap 2201508 2201524 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT YPDSF_1949 2201543 - 2202412 + | gluconate 5-dehydrogenase TERM 2383 2202609 - 2202597 - g 100 -9.1 -5.1615 | overlap 2202599 CCAATATCCAAAAAA TGGCC GCC GGCCA GCCACTGAACGATCA YPDSF_1950 2202461 - 2202997 + | thermosensitive gluconokinase YPDSF_1951 2203075 - 2203542 + | hypothetical protein YPDSF_1952 2205063 - 2203873 - | hypothetical protein TERM 2384 2205252 - 2205225 - R 100 -14.2 -5.23292 | opp_overlap 2205220 CCAGATAAAACAAAA CCCCCTGTAAGC CGAT ACTCACAGGGGG TAGGGTCTATCTCGA YPDSF_1953 2206762 - 2205299 - | NADH dehydrogenase subunit N YPDSF_1954 2208301 - 2206769 - | NADH dehydrogenase subunit M TERM 2385 2208093 - 2208081 - G 70 -9.1 -3.61536 | AATCTAATGCCGAAA CGTGG GAT CCACG GCACATTATAATATG YPDSF_1955 2210185 - 2208341 - | NADH dehydrogenase subunit L TERM 2386 2209241 - 2209220 - G 72 -8.1 -3.87815 | gap 1 GCCCAGCGCCAGAAA CATGTAGCCA ATC TGGCT-CATG GTGGAGTACGCCAAC YPDSF_1956 2210484 - 2210182 - | NADH dehydrogenase subunit K YPDSF_1957 2211026 - 2210481 - | NADH dehydrogenase subunit J YPDSF_1958 2211581 - 2211039 - | NADH dehydrogenase subunit I YPDSF_1959 2212573 - 2211596 - | NADH dehydrogenase subunit H YPDSF_1960 2215314 - 2212570 - | NADH dehydrogenase subunit G TERM 2387 2213438 - 2213428 - G 70 -8.2 -3.67173 | opp_overlap 2213421, overlap 2213418 ATAAACCTGGAAGAA GCGC TGT GCGC GGCCTTCCTGATTGA YPDSF_1961 2216786 - 2215401 - | NADH dehydrogenase I subunit F TERM 2388 2216657 - 2216667 + g 86 -8.2 -4.7373 | ACGCTTTTTCTGCCC CGGC ATA GCCG TTTTTGCTGCGATAC YPDSF_1962 2217346 - 2216783 - | NADH dehydrogenase subunit E TERM 2389 2217319 - 2217331 + g 70 -3.3 -4.75372 | CAAGGCTTCCGTTAT GAGCC TGA GTCTC TTTTTGATCACTCAT YPDSF_1963 2219145 - 2217349 - | bifunctional NADH:ubiquinone oxidoreductase subunit C/D TERM 2390 2219048 - 2219038 - G 79 -8.2 -4.30719 | TGCTTGCACAACAAA GGCC TCT GGCC CAAAACGGTTCGACA YPDSF_1964 2219963 - 2219286 - | NADH dehydrogenase subunit B YPDSF_1965 2220565 - 2220065 - | NADH dehydrogenase subunit A TERM 2391 2220747 - 2220726 - R 74 -10.3 -2.57211 | overlap 2220725 ACTCCTTTCGATAAC CTTTTGTCA ACTT TGACAAAAG TAACTACACATTAAT TERM 2392 2220891 - 2220903 + r 70 -7.7 -3.65522 | ACTATACCATTGTCT CAGGA ATA TCCTG TTCTTCCACTCAGTA TERM 2393 2220904 - 2220928 + r 78 -2.2 -5.52384 | gap 1, overlap 2220906 CTCAGGAATATCCTG TTCT-TCCACT CAGT AGTGGACAGTA TTTTTTTGATCCAGG YPDSF_1966 2222176 - 2221244 - | LysR family transcriptional regulator TERM 2394 2223905 - 2223893 - g 80 -10.5 -3.6608 | overlap 2223871 AGCATGCGATTCAAA CCGCC TTG GGCGG CTATCAGAGCATTAG YPDSF_1967 2223031 - 2224245 + | aminotransferase AlaT YPDSF_1968 2224396 - 2224989 + | hypothetical protein TERM 2395 2224992 - 2225019 + T 100 -15.8 -3.28924 | TTCACTGGATTGATC TTTATAGCCTGC TTGT GCAGGCTATAAA TTATGACAAGAGATA TERM 2396 2225199 - 2225189 - T 71 -6.8 -4.15222 | ATTTTCGGCAAGAAA CTGC TCA GCAG TCATCGCATGAACAT YPDSF_1969 2227224 - 2225332 - | ion transport protein TERM 2397 2227392 - 2227376 - R 100 -9.4 -5.42131 | opp_overlap 2227375 TAACGATACAAAAAA GGTGCC GTCGA GGCACC CTACTATTGGCTTAT YPDSF_1970 2228112 - 2227456 - | putative phosphatase YPDSF_1971 2228771 - 2228277 - | hypothetical protein YPDSF_1972 2229524 - 2229069 - | hypothetical protein TERM 2398 2229410 - 2229391 - G 76 -7.8 -4.37534 | opp_overlap 2229390 2229391 AAACGGATACCAAAA CGGGTCAC TACC GTGACACG ATTCTCGGGGAACAC YPDSF_1973 2229946 - 2231148 + | acetate kinase TERM 2399 2231437 - 2231406 - g 72 -3.7 -4.7497 | overlap 2231408 TCCATGGAGCAAAAA GGGGTAAGCTTGA GCGTAT TCAAGCCTATCGC CCAGCCACGTGCGGG YPDSF_1974 2231316 - 2233469 + | phosphate acetyltransferase TERM 2400 2233561 - 2233587 + T 72 -10.1 -2.84602 | gap 1, opp_overlap 2233550, overlap 2233556 2233562 ACATCCATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCCCTGCC TERM 2401 2233562 - 2233588 + T 84 -10.1 -3.74872 | gap 1, opp_overlap 2233550, overlap 2233556 2233561 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCCCTGCCT TERM 2402 2233647 - 2233678 + T 79 -10.9 -3.05463 | opp_overlap 2233653, overlap 2233653 GGGTTTGTCAGCAGT CTGAAACGCCAGC CTCTGC GCTGGCGTTTTTG TTACATCAGACACGT TERM 2403 2233672 - 2233653 - T 84 -10.7 -3.58343 | opp_overlap 2233647 2233653 GTCAGCAGTCTGAAA CGCCAGC CTCTGC GCTGGCG TTTTTGTTACATCAG TERM 2404 2233653 - 2233672 + T 100 -10.7 -5.10461 | opp_overlap 2233653, overlap 2233647 GTCAGCAGTCTGAAA CGCCAGC CTCTGC GCTGGCG TTTTTGTTACATCAG TERM 2405 2233712 - 2233698 - T 75 -7.1 -4.26589 | opp_overlap 2233697 2233705 ATCAGACACGTAAAA CAGGG AGCCG CCCTG CATTCTGGGGCGGTT TERM 2406 2233705 - 2233725 + T 87 -8.2 -4.50358 | opp_overlap 2233698, overlap 2233697 ACGTAAAACAGGGAG CCGCCCTG CATTC TGGGGCGG TTTTCCTCTTTAGGT YPDSF_1975 2234769 - 2233735 - | LacI family transcriptional regulator TERM 2407 2234094 - 2234113 + g 81 -6.4 -4.93296 | overlap 2234088 TGGCCGCATCGGGCG TGGTGACC GTTT GGTCAGCA TTTTTGTAATGCTCG YPDSF_1976 2235083 - 2235526 + | phosphotransferase enzyme II, A component YPDSF_1977 2235695 - 2235982 + | hypothetical protein ulaA 2235995 - 2237251 + | ascorbate-specific PTS system enzyme IIC TERM 2408 2237282 - 2237299 + T 100 -12.7 -3.62572 | AAGACGTCACCATCA CCCCCTC CTTG GAGGGGG TTTAAACTGATAATA TERM 2409 2237344 - 2237320 - T 90 -5.7 -5.56673 | opp_overlap 2237320 ACTGATAATAAAAAA CCAAAGCGC TTTAGCG GGGCTTTGG TTTTTTTATTGAGCA TERM 2410 2237320 - 2237344 + T 100 -6.4 -5.7946 | opp_overlap 2237320 ACTGATAATAAAAAA CCAAAGCGCT TTAGC GGGGCTTTGG TTTTTTTATTGAGCA YPDSF_1979 2237916 - 2237368 - | hypothetical protein TERM 2411 2238682 - 2238672 - R 71 -6.8 -4.15543 | overlap 2238674 CAAAGATCGCCAAAA CACG TTC CGTG GCCGGTAACGAACCA YPDSF_1982 2239606 - 2238914 - | hypothetical protein TERM 2412 2239740 - 2239752 + H 100 -4.1 -6.47325 | GTTGAGCGGTTTATT GAGTC CCT GATTC TTTTTTTTATTTTTT YPDSF_1983 2239960 - 2240868 + | hypothetical protein YPDSF_1984 2241789 - 2240992 - | histidine/lysine/arginine/ornithine transporter subunit YPDSF_1985 2242519 - 2241803 - | histidine transport system permease protein HisM TERM 2413 2242251 - 2242233 - G 83 -3.1 -5.42259 | CCACTGCGAAAAAAA GCATTGA GCAGA TCATTGC CTCGGATTATCTCCA YPDSF_1986 2243202 - 2242516 - | histidine transport system permease protein HisQ TERM 2414 2242828 - 2242816 - G 88 -10.5 -4.21922 | opp_overlap 2242813 2242816 GGAGGTAAAACCAAA GGCCG TCG CGGCC TCAATTTGCCCTTTA YPDSF_1987 2244087 - 2243305 - | histidine-binding periplasmic protein TERM 2415 2244448 - 2244419 - R 90 -7.1 -5.18995 | overlap 2244420 AACAGAATACAAAAA CCCTACTACAGCA CCAT CGCTGTTGCAGGA TCATTGTGGAGCATA TERM 2416 2244447 - 2244420 - R 73 -8.4 -3.68957 | overlap 2244419 ACAGAATACAAAAAC CCTACTACAGCA CCAT CGCTGTTGCAGG ATCATTGTGGAGCAT YPDSF_1988 2245184 - 2244612 - | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase TERM 2417 2245324 - 2245353 + r 77 -6.5 -4.71382 | gap 2, opp_overlap 2245324 CACCATGAATAAAAA GGTGCA-CC-GCG CCTAAA CGCAGGTTGCACC TTTTTGGCTCATTCT TERM 2418 2245353 - 2245324 - R 90 -7.2 -5.15167 | gap 2, opp_overlap 2245324 CACCATGAATAAAAA GGTGC-ACC-GCGC CTAA ACGCAGGTTGCACC TTTTTGGCTCATTCT TERM 2419 2245373 - 2245392 + r 76 -10.8 -2.57344 | overlap 2245372 2245375 TGGCTCATTCTGTTT TATGACGG ATAC CCGTCATA CTTCTACCCGCCATA YPDSF_1989 2246948 - 2245431 - | amidophosphoribosyltransferase YPDSF_1990 2247470 - 2246961 - | colicin V production protein TERM 2420 2247279 - 2247269 - G 79 -6.8 -4.71426 | opp_overlap 2247268 TCGCGATGAACAAAA TGCC GAT GGCA ATTCCGTTGCGAACA YPDSF_1991 2248504 - 2247782 - | hypothetical protein TERM 2421 2248024 - 2248036 + g 80 -4.7 -5.06414 | opp_overlap 2248020, overlap 2248023 GGACAACATAAGCCT GCCCC ACT GGCGC TTTTTCTTCCACCGG TERM 2422 2248081 - 2248102 + g 79 -5.1 -5.05113 | GCTTAGGTTTCACTT CCAGCGG TTTTTTCT CTGCTGG TTTTGTTTCTATCGG YPDSF_1992 2249928 - 2248624 - | bifunctional folylpolyglutamate synthase/ dihydrofolate synthase TERM 2423 2249904 - 2249880 - G 90 -13.5 -3.93262 | opp_overlap 2249872 2249867 GCTCAAGATAGCAAA GCCACGCGGCC AAA GGCGACGTGGC TTGGGGAGTTTGATG TERM 2424 2250167 - 2250139 - R 76 -10.4 -2.90804 | gap 1, opp_overlap 2250139, overlap 2250138 ATAAGGCACAATAAC CGGGCACCA-TCT TACA AGAGTGATGCCCG TTGAGTTAATCAGAC YPDSF_1993 2251091 - 2250177 - | acetyl-CoA carboxylase subunit beta TERM 2425 2251212 - 2251176 - R 78 -2.2 -5.4505 | gap 1, overlap 2251187 2251189 CTCTCCAATAAAAAA TGCCTGAGATACA-CGC CAGT GCGACGTGGCTAAGGCA CCGAAACTTGGATTG YPDSF_1994 2251984 - 2251322 - | hypothetical protein TERM 2426 2252186 - 2252165 - R 73 -5.1 -4.58395 | overlap 2252171 GTCATCCGCCAAAAA CAAAGGCCC CATA GGAACTTTG GGTAACGCGAAGTGG truA 2253022 - 2252141 - | tRNA pseudouridine synthase A TERM 2427 2252937 - 2252953 + g 91 -6.5 -5.1356 | opp_overlap 2252937 AACGCAATTTTCAAA CCGGC CACTTCT GCCGG TTTTTCTTGCTGAGC YPDSF_1996 2254032 - 2253022 - | putative semialdehyde dehydrogenase TERM 2428 2253158 - 2253194 + g 71 -10.7 -3.11459 | opp_overlap 2253158 2253156 CGAACGCAACCAATA CTCAGGGCATCGCTGCC GGA GGCGTCGCTGACCTGGG TTGGATAATCATCTT TERM 2429 2254140 - 2254162 + r 80 -9.1 -4.0257 | opp_overlap 2254142, overlap 2254132 2254142 ACGTTATTGAACAGC AAGGGCGGT AACAC ACCGCCCTG TTATTAATTTTTACG TERM 2430 2254160 - 2254142 - R 95 -12.4 -3.38072 | opp_overlap 2254140 2254132 2254142 GTTATTGAACAGCAA GGGCGGTA ACA CACCGCCC TGTTATTAATTTTTA TERM 2431 2254142 - 2254160 + r 90 -11.7 -3.58785 | opp_overlap 2254142, overlap 2254140 2254132 GTTATTGAACAGCAA GGGCGGT AACAC ACCGCCC TGTTATTAATTTTTA YPDSF_1997 2255389 - 2254202 - | erythronate-4-phosphate dehydrogenase YPDSF_1998 2256161 - 2255376 - | AraC family transcription regulator YPDSF_1999 2256387 - 2257304 + | hypothetical protein YPDSF_2000 2257589 - 2258626 + | flagella biosynthesis regulator TERM 2432 2258728 - 2258699 - T 93 -10.9 -4.22132 | opp_overlap 2258705, overlap 2258705 TTAAATACAAAAATA CAAAAAGCGACTA ATAT CAGTCGCTTTTTA ACAAACCGCTTACGC TERM 2433 2258722 - 2258705 - T 100 -7.7 -5.38398 | opp_overlap 2258705, overlap 2258699 ACAAAAATACAAAAA GCGACTA ATAT CAGTCGC TTTTTAACAAACCGC TERM 2434 2258705 - 2258722 + T 76 -7 -4.56597 | opp_overlap 2258705 2258699 ACAAAAATACAAAAA GCGACT AATATC AGTCGC TTTTTAACAAACCGC TERM 2435 2258942 - 2258896 - T 75 -10.5 -2.87564 | gap 1, opp_overlap 2258908 2258929 2258935, overlap 2258882 2258908 TCATTCTTTTATACA GCATATAAAAAAGCATGCAGAA TATC TTCCACATGCTTTTTT-TAAGC AATTTAGACAGCTTA TERM 2436 2258908 - 2258931 + T 84 -3.8 -5.41746 | opp_overlap 2258882 2258896 2258908, overlap 2258929 ACAGCATATAAAAAA GCATGCAGAA TATC TTCCACATGC TTTTTTTAAGCAATT TERM 2437 2258931 - 2258908 - T 100 -8.2 -5.40625 | opp_overlap 2258908 2258929, overlap 2258882 2258896 ACAGCATATAAAAAA GCATGCAGAA TATC TTCCACATGC TTTTTTTAAGCAATT YPDSF_2001 2259498 - 2258968 - | mannose-resistant/Proteus-like fimbrial protein TERM 2438 2260212 - 2260251 + H 72 -9.2 -3.14344 | gap 1 TCACTTATAACGTGG GGGC-GCTGTCGCCCTTCA AGA TGCAGGGAGTTAGCTGCCC TTGCTCACCCCAGTC YPDSF_2002 2260286 - 2260981 + | aspartate/glutamate racemase TERM 2439 2261154 - 2261135 - T 100 -12.2 -5.24003 | AATAAAAAGTAAAAA GCCTACGA TCTC TCGTAGGC TTCAGACTGCTGACA TERM 2440 2261244 - 2261218 - T 84 -10.1 -3.82218 | gap 1, opp_overlap 2261227, overlap 2261219 2261234 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 2441 2261245 - 2261219 - T 72 -10.1 -2.88849 | gap 1, opp_overlap 2261227, overlap 2261218 2261234 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT TERM 2442 2261349 - 2261318 - T 90 -11.6 -3.62046 | opp_overlap 2261324 GCACTTTGTCAATAA CCTCAAGCCTACGA TCTC TCGTAGGCTTTGGG GAGTAAATCTGAATC TERM 2443 2261324 - 2261343 + T 91 -12.2 -3.55761 | opp_overlap 2261318 TGTCAATAACCTCAA GCCTACGA TCTC TCGTAGGC TTTGGGGAGTAAATC YPDSF_2003 2262612 - 2261389 - | 3-oxoacyl-(acyl carrier protein) synthase I TERM 2444 2264072 - 2264058 - g 76 -5.7 -4.65916 | GCTAGCGCAACAAAA TGGCA TGACC TGCCA CTACCAACATGAACT mnmC 2262784 - 2264853 + | 5-methylaminomethyl-2-thiouridine methyltransferase YPDSF_2005 2265309 - 2265031 - | hypothetical protein YPDSF_2006 2265909 - 2265367 - | hypothetical protein TERM 2445 2265787 - 2265774 - G 82 -6.7 -4.77438 | overlap 2265777 AGCCATGAGCAAAAA TCACC CGAT GGTGA GGAGATTCTTCATCG TERM 2446 2265963 - 2265935 - R 82 -10.3 -3.66883 | GTAAGAGAGGGTAAA CACCGCTAAAGTC ACC GTATTTAGCGGTG GTGGGTGCCTAAATT YPDSF_2007 2266815 - 2266009 - | hypothetical protein TERM 2447 2266731 - 2266701 - G 74 -11.1 -3.04263 | gap 1, overlap 2266720 ATCCCACCGCTAACA GTGCGGGGACGGTT AACA AGCCGCCCCCGC-C GGCAATGGAATCAAT mepA 2267607 - 2266819 - | penicillin-insensitive murein endopeptidase TERM 2448 2267520 - 2267498 - G 70 -9.1 -3.57462 | GACTCGAGCGGCAAA GGCTGCGCG CCAAT CACGCAACC ATTAGCAAAGCCACC YPDSF_2009 2268737 - 2267652 - | chorismate synthase YPDSF_2010 2269746 - 2268814 - | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase YPDSF_2011 2270035 - 2270646 + | hypothetical protein TERM 2449 2270875 - 2270856 - T 100 -15 -3.8579 | AGCCAATAAGCGAAA GCGCGGCA AGAA TGCCGCGC CAGTTAGACGTTGAT YPDSF_2012 2271435 - 2270944 - | phosphohistidine phosphatase fadJ 2274328 - 2272004 - | multifunctional fatty acid oxidation complex subunit alpha TERM 2450 2272762 - 2272779 + g 71 -7 -4.21827 | AGAACCCAGCGCGAT CAGCCA CCACAA TGGCTG TTTTACCCTGTTTCC TERM 2451 2272929 - 2272904 - G 71 -11.2 -2.78813 | overlap 2272889 2272887 2272903 2272927 GTGCAGGCCAATAAC CTGCTCTGGC CGTTGC GCCAAAGCAG CAATCTGGCTGATGG TERM 2452 2273579 - 2273550 - G 71 -5.1 -4.47456 | gap 1, overlap 2273552 ATACGGAATAATAAA GC-TTTACCCAACG GCC CACTGAGTAAACGC TCCTGCCATGGTAAT fadI 2275638 - 2274328 - | 3-ketoacyl-CoA thiolase TERM 2453 2274561 - 2274590 + g 75 -9.3 -3.85698 | opp_overlap 2274560 2274558 CGCGAGCAAAAGTAT CACTGGCAAACAT TTTC AGGTTAGCCAGTG TTTGTGCGGCGAAGG TERM 2454 2275702 - 2275690 - R 79 -7.7 -4.34559 | AAAGATAACAAATAA CAGGT CTG ACCTG ATCCGAACATTGTTA TERM 2455 2275868 - 2275888 + r 93 -12.6 -3.18239 | opp_overlap 2275868 CATCTAAAGTAATAA CGCGAAGC AAAAG GCTTCGCG TTGGTCAGGTATGTA TERM 2456 2275888 - 2275868 - R 100 -12.6 -3.90425 | opp_overlap 2275868 CATCTAAAGTAATAA CGCGAAGC AAAAG GCTTCGCG TTGGTCAGGTATGTA YPDSF_2015 2276221 - 2275925 - | hypothetical protein YPDSF_2016 2276635 - 2277900 + | long-chain fatty acid outer membrane transporter TERM 2457 2277955 - 2277928 - T 100 -17.2 -3.07113 | opp_overlap 2277928 2277935, overlap 2277930 2277935 CATCACCTTATCCAA TAGAAAAGCGCC TGAT GGCGCTTTTCTA TTTTGAATACGGCGG TERM 2458 2277928 - 2277955 + T 100 -17.2 -4.18018 | opp_overlap 2277928 2277930 2277935, overlap 2277935 CATCACCTTATCCAA TAGAAAAGCGCC TGAT GGCGCTTTTCTA TTTTGAATACGGCGG TERM 2459 2277953 - 2277930 - T 100 -15.4 -3.09327 | opp_overlap 2277928 2277935, overlap 2277928 2277935 TCACCTTATCCAATA GAAAAGCGCC TGAT GGCGCTTTTC TATTTTGAATACGGC TERM 2460 2277948 - 2277935 - T 100 -9.5 -4.68724 | opp_overlap 2277928 2277935, overlap 2277930 2277928 TTATCCAATAGAAAA GCGCC TGAT GGCGC TTTTCTATTTTGAAT TERM 2461 2277935 - 2277948 + T 100 -9.5 -4.90471 | opp_overlap 2277935 2277930 2277928, overlap 2277928 TTATCCAATAGAAAA GCGCC TGAT GGCGC TTTTCTATTTTGAAT YPDSF_2017 2278771 - 2278007 - | VacJ lipoprotein TERM 2462 2278797 - 2278814 + r 78 -5.6 -4.88895 | ATGAAAGTCTGTCTA TCCCTT TCACTT AAGGGA TTTGTTTATTTATTT YPDSF_2018 2280033 - 2278807 - | cytochrome c-type biogenesis protein YPDSF_2019 2280530 - 2280033 - | cytochrome c-type biogenesis protein YPDSF_2020 2281093 - 2280527 - | thiol:disulfide interchange protein DsbE YPDSF_2021 2283060 - 2281090 - | cytochrome c-type biogenesis protein TERM 2463 2282043 - 2282061 + g 74 -8.1 -4.09685 | gap 1 CTTCATGCTGAGTCC GGCTGCGC ACCT GCGC-GCC TTTTACCGCATACAG YPDSF_2022 2283551 - 2283057 - | cytochrome c-type biogenesis protein CcmE YPDSF_2023 2283850 - 2283548 - | heme exporter protein D TERM 2464 2283808 - 2283797 - G 76 -5.8 -4.61868 | overlap 2283799 GAGCCAGACATAAAA GGCA TAGT TGCC CATGGCAAAAAATTC YPDSF_2024 2284584 - 2283847 - | heme exporter protein C YPDSF_2025 2285306 - 2284647 - | heme exporter protein B YPDSF_2026 2285932 - 2285276 - | cytochrome c biogenesis protein CcmA TERM 2465 2285903 - 2285889 - GR 73 -5.6 -4.42464 | overlap 2285891 AACTGCTGAAATAAA CAGCGA TCA TCGCGG ATACAGGTCAGATTT YPDSF_2027 2286844 - 2286377 - | hypothetical protein TERM 2466 2287132 - 2287146 + H 74 -7.8 -3.91364 | opp_overlap 2287129 2287132 TCGAACCAGTAACTA GCCCTT AGG AGGGGC TTGTTATATCCGTTT YPDSF_2028 2287460 - 2288002 + | hypothetical protein TERM 2467 2289092 - 2289074 - gf 70 -2.4 -5.04265 | AAAAAAGAGTAAAAA CAAAAGCC CAT GGGTTTTA AACAGCCGCGATGAA YPDSF_2029 2287947 - 2290046 + | membrane protein TERM 2468 2290134 - 2290157 + F 90 -2.4 -5.94214 | gap 1 GGTATCAGTTCGATG TGT-CCGTCAC TCG GTGTTGGGACA TTTTTTTATTCTATT TERM 2469 2290355 - 2290339 - f 75 -2.3 -5.38326 | TTAATTAAATAAAAA GTGTA AAATGCA TACAC ATCAATACAGTAACC YPDSF_2030 2290422 - 2290763 + | hypothetical protein TERM 2470 2290773 - 2290801 + T 78 -8.9 -3.83921 | opp_overlap 2290772 2290773 AGCTAATGCATTAAT GGGTTCTTTGC CACCCAA GCAGAGAGCCC TTCTATTATCTTGGA YPDSF_2031 2291203 - 2290838 - | membrane protein YPDSF_2032 2291689 - 2291210 - | hypothetical protein TERM 2471 2291663 - 2291674 + g 89 -2.2 -5.80951 | overlap 2291665 ACGCTCTAACAACGC CGGT AAAA ACTG TTTTTTCTTTTCCAT YPDSF_2033 2292576 - 2291770 - | hypothetical protein YPDSF_2034 2293444 - 2292596 - | hypothetical protein YPDSF_2035 2293704 - 2293444 - | hypothetical protein TERM 2472 2293749 - 2293783 + r 89 -11.4 -3.44377 | opp_overlap 2293747 2293745 2293743 2293741, overlap 2293748 GAAAAATCAGAGACC GCATGCTCTACGTGTG TTT CCCACGCAGAACATGC TTACCTTTTATCTAT YPDSF_2036 2296082 - 2293803 - | hypothetical protein TERM 2473 2294519 - 2294506 - G 70 -8.1 -3.65351 | TTATTTTTAGTCAAA CGCGA CATA TCGCG CTCGGCCTGTTCCCA TERM 2474 2296596 - 2296610 + r 76 -10 -3.36492 | opp_overlap 2296594 CGAAAAAGAATATCG GGCATC GCG GATGCC TTCTGGCGTTGGGCC TERM 2475 2297404 - 2297431 + r 82 -5.6 -5.05782 | overlap 2297410 CTTTAATCAGTTTAT TTTCACGAAACG CGAT CGTTTCTTGTAA TTTTTTAGCCTGGCT TERM 2476 2297410 - 2297425 + r 72 -7.6 -3.81575 | overlap 2297404 TCAGTTTATTTTCAC GAAACG CGAT CGTTTC TTGTAATTTTTTAGC TERM 2477 2298438 - 2298473 + r 71 -7 -4.14739 | gap 1, opp_overlap 2298449 GTAACTGCTGTGTCG CGTTCAATAACGCAGGT AAG ATCTGC-TCATTGGACG TTTTGGCATAACTCA TERM 2478 2299802 - 2299816 + r 77 -6.4 -4.58663 | opp_overlap 2299802 TGCTTAATGAAGTTA TCCAGT AAC GCTGGA TTTTTCGCCAATGCT TERM 2479 2300003 - 2299993 - R 77 -8.2 -4.05446 | overlap 2299994 GGCGGCAATGACAAA GCGC GGT GCGC CGTACCAAAAACCTA TERM 2480 2300092 - 2300066 - R 74 -9.4 -3.28791 | ATTCTGGCTTCATAA CTTTCGAGAGGC CGC GCCTCACCAAAG CCGAGGAAAGGCCCC YPDSF_2039 2301047 - 2300211 - | OmpA family protein YPDSF_2040 2301842 - 2301063 - | transposase/IS protein TERM 2481 2301761 - 2301775 + g 77 -11.4 -3.3506 | overlap 2301774 CTGCCTGTTGTGACA GCGCAG GCG CTGCGC TTATAAGGCTTTCCA YPDSF_2041 2302864 - 2301842 - | transposase for insertion sequence IS100 TERM 2482 2302886 - 2302868 - R 100 -13.2 -4.01078 | AAAAGTGACCATAAA CTCTCCTG AAT CAGGAGAG CAGATTACCCCCTGG YPDSF_2042 2303546 - 2302878 - | hypothetical protein TERM 2483 2303519 - 2303503 - G 79 -9.4 -4.25104 | CTGCTTCTATCAAAA GGAGGC ATTGA GCCTCC AAGGTTCAAATCACT YPDSF_2043 2304892 - 2303543 - | hypothetical protein TERM 2484 2303632 - 2303648 + g 82 -3.6 -5.31456 | overlap 2303633 CAGCATTGGAAACTT TGTCCC AGAAG GGGCCA TTTTTTATCAATTCA YPDSF_2044 2305456 - 2304896 - | hypothetical protein TERM 2485 2305683 - 2305661 - R 100 -12 -4.72497 | opp_overlap 2305661 CACTTATTAAGAAAA CCTGCCACCC CAA AGGTGGCAAG TTTGATAGCGACATG TERM 2486 2305661 - 2305683 + r 75 -9.1 -3.72893 | opp_overlap 2305661 CACTTATTAAGAAAA CCTGCCACC CCAAA GGTGGCAAG TTTGATAGCGACATG YPDSF_2045 2306278 - 2305709 - | hypothetical protein TERM 2487 2306041 - 2306031 - G 76 -5.4 -4.8622 | TGTGCGAAGCAAAAA TCTG AAA CAGA GGCTTTACCTGAACC YPDSF_2046 2308022 - 2306520 - | hypothetical protein TERM 2488 2307738 - 2307752 + g 70 -8.6 -3.75024 | CCCACGCCATGCGCT TTCCAG AGA CTGGAA TTCTTGGTGGTGCAA YPDSF_2047 2308570 - 2308046 - | hypothetical protein YPDSF_2048 2309283 - 2308675 - | fimbrial protein YPDSF_2049 2310458 - 2309268 - | outer membrane fimbrial usher porin TERM 2489 2309780 - 2309770 - G 76 -8.2 -4.15565 | TTGATGATGGCAAAA GGCG CAT CGCC AAGTCGTGGGCCCGC TERM 2490 2311665 - 2311686 + G 77 -10.1 -3.74693 | TTTATTATCGAGTTC GGTGACCGC CTGA GCGATCACC TTTAATACGGTGGCA YPDSF_2050 2310483 - 2311691 + | transposase for the IS285 insertion element YPDSF_2051 2313263 - 2311713 - | hypothetical protein TERM 2491 2312226 - 2312239 + g 70 -8.1 -3.78312 | CAGTTCAAAGGCTCC CGGTG TGAC CACCG TTTCATAAATAATTT YPDSF_2052 2314152 - 2313391 - | pili chaperone protein TERM 2492 2314198 - 2314247 + r 73 -10.1 -2.98493 | gap 1, opp_overlap 2314201 2314205, overlap 2314195 2314201 GCAGACTTATCTTTA TAACAGACTTGCTACCGCAGCG TTTTATC CGCCTCGGCAGCAAG-CTGTTA TGCTTTACTGCTGCG TERM 2493 2314244 - 2314201 - R 89 -11.8 -3.31461 | gap 1, opp_overlap 2314198 2314195 2314201, overlap 2314205 GACTTATCTTTATAA CAGACTTGCTACCGCAGCG TTTTATC CGCCTCGGCAGCAAG-CTG TTATGCTTTACTGCT TERM 2494 2314241 - 2314205 - R 93 -12.3 -3.17622 | opp_overlap 2314201 2314198 2314195, overlap 2314201 TATCTTTATAACAGA CTTGCTACCGCAGCG TTTTATC CGCCTCGGCAGCAAG CTGTTATGCTTTACT YPDSF_2053 2314854 - 2314309 - | frimbrial protein TERM 2495 2314898 - 2314929 + r 84 -3.8 -5.52096 | opp_overlap 2314898 GATTTATTAAATATA TAGTTAATATTCGC TCAT GCCAATACTAGCTA TTTTTTATTGCCTTT YPDSF_2054 2317730 - 2315055 - | Clp ATPase TERM 2496 2316317 - 2316329 + g 70 -9.1 -3.54424 | overlap 2316323 2316326 TCAACTGCTCAGTAC GCGCA TCC TGCGC TTTACCAAAGTGCCG YPDSF_2055 2318513 - 2320393 + | hypothetical protein TERM 2497 2320582 - 2320537 - g 74 -7.5 -4.26076 | gap 1 CCAGCGCCAGGAAAA GCGC-CCTTGCCTGAACAGGAA GCC TTCCGCATCGGGCAAAGTGCGC ACATGACGTTCTCTC YPDSF_2056 2320393 - 2321238 + | hypothetical protein YPDSF_2057 2321300 - 2321413 + | hypothetical protein TERM 2498 2322259 - 2322239 - g 70 -9.7 -3.29511 | TTGATGCCGCGATAA CCCCGATAG CGC CTATCGTGG TGCCGATCCCAGAAG YPDSF_2058 2321512 - 2322693 + | hypothetical protein TERM 2499 2322907 - 2322895 - g 76 -5.5 -4.85599 | CCTATCCTAGAAAAA GTGGC ACA ACCAC AAGGTTTGGCAGTAA TERM 2500 2323031 - 2323013 - g 70 -9.6 -3.23853 | overlap 2323011 TTTTTGCAACGAATA TCGATGGC ATT GCCATCAA ACCTGCATGGAATAA YPDSF_2059 2322700 - 2323731 + | fimbrial protein TERM 2501 2324780 - 2324767 - gf 89 -2.4 -5.75342 | opp_overlap 2324767 GCGGGTGAAAAAAAA GTGA GTTTCT TCAC TGATCTTCCCACATC TERM 2502 2324850 - 2324840 - gf 100 -5.4 -5.7946 | GTGTGAATAAAAAAA CACT AAA AGTG GAAAAGAAAGAGGTG YPDSF_2060 2323771 - 2325108 + | hypothetical protein YPDSF_2061 2325054 - 2325806 + | hypothetical protein TERM 2503 2325898 - 2325912 + G 76 -7.2 -4.34912 | opp_overlap 2325897 ATTTTAAGGGAAATG CGTTAT GGA ATAACG TTATTTTCATTACTT TERM 2504 2326694 - 2326676 - g 85 -3.8 -5.40072 | overlap 2326678 CTGGCTGGAAAAAAA GTTTGGCA TCA TACCAAGC TTAGCCTCAACCTTG YPDSF_2062 2325807 - 2327489 + | hypothetical protein YPDSF_2063 2327486 - 2327968 + | hypothetical protein TERM 2505 2327982 - 2328019 + T 83 -12.2 -2.73994 | opp_overlap 2327985, overlap 2327979 AATTTTTGAGCGATA TCACGTCATGCTAAAT AACCCG ACTTAGCATGACGTGG TCGTATTGGAAGAAT TERM 2506 2328016 - 2327985 - T 88 -12.5 -2.64616 | opp_overlap 2327982 2327979 TTTTGAGCGATATCA CGTCATGCTAAAT AACCCG ACTTAGCATGACG TGGTCGTATTGGAAG YPDSF_2064 2328928 - 2328326 - | LuxR family regulatory protein TERM 2507 2330152 - 2330180 + r 100 -11.7 -4.8083 | opp_overlap 2330152 ATATCGTTAAGAAAA GAGGGCGGCATAA CCC TAATGCAGCCCTC TTTTTCATGCTATTG TERM 2508 2330180 - 2330152 - R 100 -11.7 -4.65078 | opp_overlap 2330152 ATATCGTTAAGAAAA GAGGGCGGCATAA CCC TAATGCAGCCCTC TTTTTCATGCTATTG YPDSF_2065 2331284 - 2330190 - | murein hydrolase B TERM 2509 2331192 - 2331175 - G 80 -3.3 -5.26875 | opp_overlap 2331177, overlap 2331176 2331177 GGCTCAAGCAAAAAA CCGCCCT GAAC AGGGCTA TCTGACGGGGTTGCA TERM 2510 2332115 - 2332078 - g 79 -11.3 -3.54543 | gap 1, overlap 2332068 2332090 ATGGACCTGGCGAAA CCAGAGTGGAAAGGCCGC TGG GCAGC-TTCCCCCTCCGG TGCTGACTTCCAGGC YPDSF_2066 2331613 - 2332632 + | iron(III)-binding periplasmic protein TERM 2511 2332645 - 2332659 + F 71 -8.5 -3.53091 | TAATCCGTTTTACTC CGCCC CCTGC GGGCG TTTAACAAACCGAGT TERM 2512 2333036 - 2333046 + G 74 -6.8 -4.386 | GCAATAGCACCACTG GCAG TAC CTGC TTTTGTACAAAGTTA TERM 2513 2333094 - 2333108 + G 73 -3.4 -4.99035 | overlap 2333095 TCCCCTCAATGAATG GGCTGG CCG CCGGCG TTTTTATCTCGGTGA TERM 2514 2333407 - 2333422 + G 72 -8.2 -3.90464 | CGCCGCTAACATGCT GGCGGG AGTA CTCGCC TTATGTTGTTTGGGG TERM 2515 2334055 - 2334067 + G 70 -9.1 -3.50737 | overlap 2334051 TGCTCCCGGCGCCGC TGCGG GTG CCGCA TTAGTCTTTCTGGCT YPDSF_2067 2332688 - 2334274 + | iron(III)-transport system permease YPDSF_2068 2334271 - 2335320 + | iron(III)-transport ATP-binding protein YPDSF_2069 2335908 - 2335393 - | hypothetical protein TERM 2516 2336205 - 2336180 - H 79 -10.7 -3.00986 | overlap 2336177 AACCACATTAAATTA TGTTTTGTTTT AAAA AAAACAAAACA CTCACCATTATAATT YPDSF_2070 2336378 - 2336863 + | hypothetical protein TERM 2517 2336872 - 2336891 + T 85 -9.3 -4.11346 | GTATTAATTTATTCG GGGATGG CCTACA CCATCCC TTATTATTTACGTGT YPDSF_2071 2337941 - 2337093 - | hypothetical protein TERM 2518 2340165 - 2340155 - g 86 -3.2 -5.63012 | AAAAATAAAGAAAAA CTGG ATA CCAA TATTAAGTTTCTCTG TERM 2519 2340241 - 2340265 + G 74 -4.3 -4.75288 | TAAAACCAATACTAT TTTGCAAGATG AGT CATTGTGCGAA TTTATTTTGGTCTGG YPDSF_2072 2338772 - 2341198 + | dimethyl sulfoxide reductase chain A protein YPDSF_2073 2341210 - 2341827 + | dimethyl sulfoxide reductase chain B protein YPDSF_2074 2341829 - 2342605 + | dimethyl sulfoxide reductase chain C protein TERM 2520 2342641 - 2342660 + F 77 -6.4 -4.60487 | overlap 2342644 TTCCATGTGGTGATT TACCCGCT GATT AGCGGCTA TTTTTGCGGCTAATC YPDSF_2075 2342963 - 2343559 + | hypothetical protein YPDSF_2076 2343556 - 2344125 + | iron-sulphur protein TERM 2521 2344163 - 2344176 + T 71 -6.7 -4.13767 | ACTGCACCTTATTCA GTTGG GTAT CCAAC TTTTGGGGTGCAGCC YPDSF_2077 2345027 - 2344371 - | putative lipoprotein TERM 2522 2344766 - 2344776 + g 73 -3.2 -4.93288 | overlap 2344775 TAATATCACCCGCGT TGGT CAT GCCA TTTTGTTTAAATGTT YPDSF_2078 2345425 - 2345024 - | lipoprotein YPDSF_2079 2346078 - 2345407 - | lipoprotein YPDSF_2080 2346668 - 2347099 + | hypothetical protein YPDSF_2081 2347718 - 2347194 - | B-type cytochrome YPDSF_2082 2349179 - 2347944 - | aminotransferase TERM 2523 2348639 - 2348608 - G 100 -7.4 -5.40474 | gap 1, opp_overlap 2348613 ACTCGCTCAAAAAAA TCCAACTCAACA-CA TTG CGCTGTTGGGTTGGA TGGAAAACCGAGGAT TERM 2524 2348738 - 2348713 - G 87 -4.7 -5.40474 | AGCTCGCCAAAAAAA TCAATGCCTTC GGTC AACGGCACTGA ACGCACTTGCGCACC TERM 2525 2349224 - 2349242 + H 70 -7.4 -3.88787 | overlap 2349226 2349241 ACCGTCCGAGCGACG CTGACCAT CAG ATGGTCTG TTTATGAACATATCC TERM 2526 2349226 - 2349240 + H 71 -8.6 -3.53174 | overlap 2349224 CGTCCGAGCGACGCT GACCAT CAG ATGGTC TGTTTATGAACATAT TERM 2527 2349689 - 2349679 - g 73 -3.2 -4.91429 | AAAGCGCAAATAAAA CAAC GCG GCTG TTGTGCCATTCTCGG TERM 2528 2349971 - 2349945 - g 70 -9.4 -3.59293 | opp_overlap 2349945, overlap 2349941 GCAAACCGAAAGCAA CGGTAAGCAACA TTT TGATGCTAACCG TGTCGTCACCTATGC TERM 2529 2350660 - 2350650 - g 70 -3.2 -4.77438 | AGCCACCATCAAAAA CCTC ACT GAGA TAGGTAAACAGCAGT YPDSF_2083 2349445 - 2350692 + | hypothetical protein TERM 2530 2350708 - 2350738 + T 84 -9.8 -3.78934 | opp_overlap 2350710 CCTTCTTCCGCATCA TATCTGCCGGAA CTTATCC TCCCGGCAGATA TTCTTCTGCGCCCAC TERM 2531 2350736 - 2350710 - T 75 -10.2 -2.78384 | opp_overlap 2350708 TTCTTCCGCATCATA TCTGCCGGAA CTTATCC TCCCGGCAGA TATTCTTCTGCGCCC glk 2351741 - 2350770 - | glucokinase TERM 2532 2351217 - 2351231 + g 71 -7.8 -3.98981 | opp_overlap 2351216 CTCCTGGCGCAATAC GGCCAG AAT CTGGTC TTCTTCTTCACTATT YPDSF_2085 2352398 - 2351922 - | hypothetical protein TERM 2533 2353323 - 2353312 - g 100 -7.2 -5.40072 | overlap 2353314 TTTGGTCGAAAAAAA GCCC ACCG GGGC CTGCTGGCTATTGGC YPDSF_2086 2352501 - 2353379 + | LysR family transcriptional regulator YPDSF_2087 2353515 - 2354504 + | ion channel protein YPDSF_2088 2354675 - 2355088 + | hypothetical protein TERM 2534 2355124 - 2355114 - T 71 -6.8 -4.16016 | opp_overlap 2355115 TCATCGCTCAATAAA GCCT GTC AGGC GGGTTTTCATGGAAT YPDSF_2089 2356410 - 2355181 - | manganese transport protein MntH TERM 2535 2355642 - 2355632 - G 82 -8.2 -4.56914 | overlap 2355633 CCATTGAAATGAAAA GCCG CAG CGGC GGTTGCCATCATCGC TERM 2536 2356495 - 2356509 + H 90 -5.8 -5.5112 | ATCAAGCGCATTTGT GATAAT GGA ATTATC TTTTTTGTTAGTAGA YPDSF_2090 2356861 - 2357928 + | nucleoside permease YPDSF_2091 2357946 - 2358032 + | CNT family H+/nucleoside symporter TERM 2537 2358058 - 2358071 + F 84 -3.7 -5.4492 | opp_overlap 2358058 ACGATCGCTTAACGA GGCGC TACG GCACC TTTTTTGTATCTATA gltX 2359266 - 2360681 + | glutamyl-tRNA synthetase TERM 2538 2360706 - 2360724 + F 100 -12.4 -5.5762 | TTTTCCGTGTTATCA GGCGGCCA CTC TGGTCGCC TTTTTTATATTTGAT TERM 2539 2360994 - 2361022 + F 100 -14.7 -2.57132 | opp_overlap 2360999 2361001, overlap 2361001 AGCTCCACCACCCTT TAAAAGACCGGCC TTT GGCCGGTTTTTTG CTTGTGCCCAGAAAA TERM 2540 2361017 - 2360999 - f 91 -10.2 -4.10161 | opp_overlap 2360994 2361001, overlap 2361001 CACCACCCTTTAAAA GACCGGCC TTT GGCCGGTT TTTTGCTTGTGCCCA TERM 2541 2361001 - 2361015 + F 100 -12.8 -5.32944 | opp_overlap 2360999 2361001, overlap 2360994 CCACCCTTTAAAAGA CCGGCC TTT GGCCGG TTTTTTGCTTGTGCC TERM 2542 2361015 - 2361001 - f 100 -12.8 -3.64716 | opp_overlap 2361001 2360994, overlap 2360999 CCACCCTTTAAAAGA CCGGCC TTT GGCCGG TTTTTTGCTTGTGCC TERM 2543 2361038 - 2361056 + F 100 -16 -3.07307 | opp_overlap 2361038 CTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC TERM 2544 2361056 - 2361038 - f 100 -16 -4.36914 | opp_overlap 2361038 CTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC YPDSF_2093 2361169 - 2361627 + | transposase for the IS1541 insertion element TERM 2545 2361701 - 2361733 + F 100 -11.3 -4.74103 | opp_overlap 2361708, overlap 2361705 2361707 2361708 CCTTATAGGCGCATA TGAAAAACCTCCGGC TAT GCCGGAGGATATTTA TTTTTCAGTTCCGAC TERM 2546 2361705 - 2361729 + F 100 -9.9 -4.91473 | opp_overlap 2361708, overlap 2361701 2361707 2361708 ATAGGCGCATATGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTTTTCAGTTC TERM 2547 2361707 - 2361727 + F 100 -12.5 -4.05491 | opp_overlap 2361708, overlap 2361705 2361701 2361708 AGGCGCATATGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTTTTCAGT TERM 2548 2361726 - 2361708 - f 100 -16 -4.8048 | opp_overlap 2361707 2361705 2361701 2361708 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTTTCAG TERM 2549 2361708 - 2361726 + F 100 -16 -3.01668 | opp_overlap 2361708, overlap 2361707 2361705 2361701 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTTTCAG TERM 2550 2361992 - 2362003 + G 73 -5.8 -4.44245 | opp_overlap 2361983, overlap 2361990 2361989 ATTAAACCAGTGGTG CCTG GCGG CAGG TTTTGTCCGTAATCT YPDSF_2094 2361894 - 2362499 + | hypothetical protein TERM 2551 2362819 - 2362808 - g 70 -2.2 -5.03945 | GAAGAATTACAAAAA CAGC AGCA ACTG ATTGAGACCCAAATT YPDSF_2095 2362631 - 2362978 + | hypothetical protein YPDSF_2096 2363294 - 2363079 - | hypothetical protein ligA 2365326 - 2363314 - | NAD-dependent DNA ligase LigA TERM 2552 2364542 - 2364524 - G 70 -2.4 -4.91511 | opp_overlap 2364537 ATTTGACGATAAAAA GCAATAAC CTG ATCACTGC CAGTGCAGAGTTTCA TERM 2553 2364834 - 2364807 - G 70 -3.2 -4.82901 | CTTGTGGCATAAAAA CCTCGCCACGGA CTTC TACGCGCCGCGG GACATTATCCCCATG TERM 2554 2365366 - 2365350 - R 100 -10.8 -5.5762 | opp_overlap 2365345 ACCAAAGATAAAAAA CCCCCG GCATG CGGGGG TTCGGGTTAATTCGA YPDSF_2098 2366403 - 2365417 - | cell division protein ZipA TERM 2555 2365917 - 2365929 + g 70 -4.8 -4.59773 | overlap 2365907 GCTGTTGTGGAGCCA CCTG ATGTG CAGG TTTTTCCACATGCGG YPDSF_2099 2366652 - 2367386 + | putative sulfate transport protein CysZ TERM 2556 2367398 - 2367416 + F 100 -14.6 -3.97139 | ATGATCATTTTCGGT GGGCGTGT CTA ACACGCCC TTGTTATTGGGATTA TERM 2557 2367752 - 2367734 - g 84 -13.2 -3.41073 | overlap 2367732 GACCGCAGGCAAAGA GCTGGTTG AAC CAACCAGC GGGAATACAGGTGTT YPDSF_2100 2367543 - 2368511 + | cysteine synthase A TERM 2558 2368566 - 2368531 - f 100 -12 -3.74693 | opp_overlap 2368541, overlap 2368541 GGCTACCGCACTAAA TGCAAAAAAAGCACCC TTTG GGGTGCTTTTTTTGTG GAGTACATCAAAGTT TERM 2559 2368541 - 2368556 + F 100 -10.4 -5.626 | opp_overlap 2368531 2368541 CTAAATGCAAAAAAA GCACCC TTTG GGGTGC TTTTTTTGTGGAGTA TERM 2560 2368556 - 2368541 - f 100 -10.4 -5.58209 | opp_overlap 2368541, overlap 2368531 CTAAATGCAAAAAAA GCACCC TTTG GGGTGC TTTTTTTGTGGAGTA YPDSF_2101 2369010 - 2369267 + | phosphohistidinoprotein-hexose phosphotransferase component of PTS system (Hpr) TERM 2561 2370382 - 2370371 - g 81 -5.8 -5.00196 | GCCGAAAGAAGAAAA CCCA TTCC TGGG CTGGCGTGCTATTCG TERM 2562 2370643 - 2370664 + G 70 -10.3 -3.01712 | opp_overlap 2370648, overlap 2370648 TCGCTCGCCATTTAG CTAAAGAAG TTGA CTTCTTTAG TATTGGGACAAACGA YPDSF_2102 2369316 - 2371043 + | phosphoenolpyruvate-protein phosphotransferase TERM 2563 2371174 - 2371140 - g 82 -3.5 -5.34555 | opp_overlap 2371142 TCAGATGATAAAAAA GACAGCAGTGTTATT GAGAT AGTTGCACCGCTGTC TGGTGAAATCGTCAA YPDSF_2103 2371092 - 2371601 + | glucose-specific PTS system component TERM 2564 2371666 - 2371642 - T 93 -9.9 -4.34488 | opp_overlap 2371645, overlap 2371644 2371645 GATACCGATAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCATATGCGCCTAT TERM 2565 2371664 - 2371644 - T 100 -12.5 -3.76888 | opp_overlap 2371645, overlap 2371642 2371645 TACCGATAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 2566 2371645 - 2371663 + T 100 -16 -4.8048 | opp_overlap 2371644 2371642 2371645 ACCGATAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 2567 2371663 - 2371645 - T 100 -16 -2.8541 | opp_overlap 2371645, overlap 2371644 2371642 ACCGATAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC YPDSF_2104 2372202 - 2371744 - | transposase for the IS1541 insertion element TERM 2568 2372333 - 2372315 - R 100 -16 -3.07307 | opp_overlap 2372315 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 2569 2372315 - 2372333 + r 100 -16 -4.36914 | opp_overlap 2372315 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 2570 2372353 - 2372370 + r 100 -10.5 -4.25104 | opp_overlap 2372353 CTGGGCACAAAAAAA CGGCGCT CAAG GGCGCCG TTTTGCTGCCGGCCA TERM 2571 2372370 - 2372353 - R 100 -9.8 -5.60993 | opp_overlap 2372353 CTGGGCACAAAAAAA CGGCGC TCAAGG GCGCCG TTTTGCTGCCGGCCA YPDSF_2105 2373821 - 2372472 - | two-component system sensor kinase TERM 2572 2373584 - 2373538 - G 73 -11 -2.91239 | opp_overlap 2373538 2373540, overlap 2373573 2373575 GAGAGAGCCGATATA TCTTTTTCTGCCGTATCTGCCA TCT CGGCAGGTAAGACAGAAAAATA TTTTTTGTCCGCTTC TERM 2573 2373538 - 2373584 + g 100 -10.3 -5.27923 | opp_overlap 2373538 2373573 2373575, overlap 2373540 GAGAGAGCCGATATA TCTTTTTCTGCCGTATCTGCC ATCTC GGCAGGTAAGACAGAAAAATA TTTTTTGTCCGCTTC TERM 2574 2373540 - 2373582 + g 100 -12.9 -4.26475 | opp_overlap 2373538 2373573 2373575, overlap 2373538 GAGAGCCGATATATC TTTTTCTGCCGTATCTGCC ATCTC GGCAGGTAAGACAGAAAAA TATTTTTTGTCCGCT YPDSF_2106 2374530 - 2373847 - | two-component system response regulator TERM 2575 2374288 - 2374322 + g 83 -2.7 -5.41746 | CCGATCAATATTGTC GCCTTTAGCCGTTAA CATAA TGATCGGCAAACGGC TTTTTTTACGCACTT YPDSF_2107 2374718 - 2375923 + | HlyD family secretion protein YPDSF_2108 2375927 - 2377963 + | ABC transporter, ATP-binding protein TERM 2576 2378007 - 2378020 + T 86 -6.7 -4.9645 | GCTTTCATCGTGATA GGTCA TCCG TGACC TTTTATTGTTATCAT TERM 2577 2378185 - 2378198 + T 74 -4.5 -4.83615 | AACGCGAATTATTTT GGGTA TAGA TGCCC TTTTTATACAAAATA YPDSF_2109 2379864 - 2378218 - | pyridine nucleotide-disulphide oxidoreductase TERM 2578 2378964 - 2378936 - G 71 -11 -2.81584 | gap 1, opp_overlap 2378954, overlap 2378935 ATATCAGCCAATAAT CT-GCCTTGCCGG TTAG CCGGCCAGGCCAG TGGAATATACGTTGC YPDSF_2110 2381384 - 2379924 - | permease TERM 2579 2380488 - 2380471 - G 71 -5.5 -4.45117 | opp_overlap 2380472, overlap 2380472 GATATTTCAAATAAA GCCAGGT CAAC ATCTGGC CCGGTTAAGTCAGGG TERM 2580 2381198 - 2381166 - G 70 -9.1 -3.50393 | overlap 2381168 GGTGAGCGTATATAA TATGGCTGGGCCTTT TCC ATAAGCCCAGCCACT GCCCCCCAAGAATGT TERM 2581 2381196 - 2381168 - G 83 -13.9 -3.32698 | overlap 2381166 TGAGCGTATATAATA TGGCTGGGCCTTT TCC ATAAGCCCAGCCA CTGCCCCCCAAGAAT YPDSF_2111 2382752 - 2381721 - | peptidase YPDSF_2112 2382940 - 2382749 - | hypothetical protein YPDSF_2113 2384155 - 2382974 - | aminotransferase YPDSF_2114 2384855 - 2386273 + | hypothetical protein TERM 2582 2386358 - 2386384 + F 72 -10.1 -2.88849 | gap 1, opp_overlap 2386347, overlap 2386353 2386359 ACATCCATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCTCTGCC TERM 2583 2386359 - 2386385 + F 84 -10.1 -3.82218 | gap 1, opp_overlap 2386347, overlap 2386353 2386358 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCTCTGCCT TERM 2584 2386463 - 2386488 + F 93 -11.9 -3.66378 | overlap 2386464 ATAAAAGTTCATTTA TGCTGAGTCAG TACG CTGGCTCAGCG TTTACATGGGATATG TERM 2585 2386464 - 2386487 + F 91 -13.2 -2.79505 | overlap 2386463 TAAAAGTTCATTTAT GCTGAGTCAG TACG CTGGCTCAGC GTTTACATGGGATAT YPDSF_2115 2386506 - 2388050 + | two-component sensor histidine kinase YPDSF_2116 2388047 - 2388754 + | two-component response regulator YPDSF_2117 2390367 - 2389135 - | hypothetical protein cysM 2391490 - 2390612 - | cysteine synthase B YPDSF_2119 2392752 - 2391661 - | sulfate/thiosulfate transporter subunit TERM 2586 2392071 - 2392061 - G 74 -2.4 -5.10163 | AATTCCAAAACAAAA CGGG TTG CCGG TTCACGCCAGACTTC cysW 2393617 - 2392742 - | sulfate/thiosulfate transporter permease subunit TERM 2587 2393386 - 2393374 - G 70 -4.8 -4.63527 | GCACCACCCCAAAAA CCAG GTTCA CTGG CACGGTTATCAATGC YPDSF_2121 2394450 - 2393617 - | sulfate/thiosulfate transporter subunit TERM 2588 2393716 - 2393674 - G 91 -12.6 -3.96618 | GTTAATGCTAAACAA CAGCGCCAGTGACACGGCCA GAA TCACCGAGGCAATGGCGCTG GCTGCCGGGTAATCA YPDSF_2122 2395487 - 2394450 - | thiosulfate transporter subunit TERM 2589 2395754 - 2395733 - R 100 -12.3 -6.32017 | gap 1 AACAAATAAAAAAAA GCCCGGT-CG TCG CGCACCGGGC AAGAAAAACAGTTTA YPDSF_2123 2397334 - 2395802 - | putative sialic acid transporter TERM 2590 2397131 - 2397115 - G 74 -8 -3.99405 | TGAAGGCAGCAGAAA TCAGGC TGGTC GCCTGA ATCAGTGTCAGGCCA TERM 2591 2397519 - 2397507 - R 76 -7.7 -4.23615 | opp_overlap 2397507 2397506 ATGACATTCAATAAA GGAGT AAA ACTCC ATTTGAGTGTATAAG YPDSF_2124 2398817 - 2397939 - | transcriptional regulator TERM 2592 2398395 - 2398379 - G 72 -3.7 -4.88228 | overlap 2398381 2398385 2398386 AGCCAACACCAAAAA TACAGAT GCG ATCCGCA GGGCGCAGCACTTTG TERM 2593 2398954 - 2398941 - R 100 -9.5 -5.85737 | AGATCAATAAAAAAA CCCGG AAAA CCGGG TAAAAAGGTCAAAAA YPDSF_2125 2399476 - 2399006 - | hypothetical protein YPDSF_2126 2400430 - 2399558 - | N-acetylmannosamine kinase TERM 2594 2400847 - 2400821 - g 72 -3.6 -4.89521 | opp_overlap 2400821, overlap 2400822 AGAGTGGAAAGAAAA TGCAGTTCCC GGAGAAG GGGAACAGCG TGGTATTGCCGTAGA YPDSF_2127 2400699 - 2401826 + | hypothetical protein YPDSF_2128 2402032 - 2402733 + | N-acetylmannosamine-6-phosphate 2-epimerase YPDSF_2129 2402796 - 2403689 + | N-acetylneuraminate lyase TERM 2595 2403749 - 2403727 - T 100 -13.5 -4.18044 | TGATAAATAATGAAA GGCCGGATT TCATC AATCCGGCC AACGGTGATATATTT YPDSF_2130 2404686 - 2403787 - | hypothetical protein TERM 2596 2403833 - 2403843 + g 70 -8.2 -3.72576 | GCAAAATAATAGCTG CCGG TAA CCGG TTTGCTAAAACGCAG TERM 2597 2404775 - 2404752 - H 74 -6.8 -4.39386 | CTGAAACGATTAAAA TTACCTTGCG ACAA CGCAAAATAA AGCGGGAAGAGAGAG TERM 2598 2404833 - 2404817 - H 76 -9.4 -3.4758 | TAGGAATAATATTAA GGCGCT GAGGT AGCGCC CAAGTGATAATAGCA YPDSF_2133 2405835 - 2406248 + | hypothetical protein TERM 2599 2408434 - 2408446 + G 75 -9.1 -3.96216 | ATAGTTATAGCTTGG GTGCC TAC GGCAC TTATTTCGATAACAG YPDSF_2134 2406804 - 2409014 + | autotransporter TERM 2600 2409032 - 2409059 + T 100 -14.2 -5.53991 | opp_overlap 2409031 AACATACCAGATGAG TGGTTTCCCGCG ATAA TGCGGGAGACCA TTTTTTTGCTCAATA YPDSF_2135 2409522 - 2409106 - | hypothetical protein YPDSF_2136 2410420 - 2409995 - | putative acetyltransferase TERM 2601 2411144 - 2411126 - g 70 -8.9 -3.61715 | TACGGCTTTGAAGAA GATGCCA TTCAT TGGCATC AGGTAGCGCATAGCC TERM 2602 2411237 - 2411263 + G 73 -2.8 -5.04385 | overlap 2411236 TATATTAAACATCGC CAGGAAGCCCGT GGT ATTGGCGGCCTG TTTTTTGACGATCTG TERM 2603 2411559 - 2411539 - g 77 -9.7 -3.65812 | GCGCTGGGAATATAA CTATCAGCC AGA GGCAGATAG TGCAGAAGCCGCGTT YPDSF_2137 2410703 - 2411632 + | coproporphyrinogen III oxidase TERM 2604 2411848 - 2411835 - g 91 -5.3 -5.40072 | GCGGGTGGAAAAAAA TGATC TGGT GATCA CCGCAGATATCCCAC YPDSF_2138 2411632 - 2412090 + | hypothetical protein YPDSF_2139 2414520 - 2412241 - | malic enzyme TERM 2605 2413662 - 2413694 + g 71 -7 -4.13728 | gap 1, opp_overlap 2413675, overlap 2413692 CCGGTTCCGGGTTTG CCAGGGC-CAGAATC AACG GATTCGGTGCCATGG TTTTCACCATCTCTG TERM 2606 2414422 - 2414439 + g 84 -11.3 -3.90112 | opp_overlap 2414421 2414420, overlap 2414427 CGCCAGTGCCAAATC CCGTTGG GTCG CCAACGG TTTGGTTGGCGAAAC YPDSF_2140 2415339 - 2414716 - | hypothetical protein TERM 2607 2415394 - 2415422 + r 77 -10.2 -3.22774 | opp_overlap 2415394 CTGCTGCAGTAAAAA CGCCCTGCCGAC GCAAA GTCCACAGGGCG TTAATCATCACTCTC TERM 2608 2415422 - 2415394 - R 100 -12.4 -4.72272 | opp_overlap 2415394 CTGCTGCAGTAAAAA CGCCCTGCCGAC GCAAA GTCCACAGGGCG TTAATCATCACTCTC YPDSF_2141 2416095 - 2415496 - | cytochrome c-type protein NapC TERM 2609 2416147 - 2416135 - R 78 -9.1 -3.76224 | CGGTTACTGACCAAA GCCAG GTG CTGGC TGGAAGCTATTACCA napB 2416590 - 2416123 - | diheme cytochrome c550 TERM 2610 2416378 - 2416410 + g 80 -2 -5.38549 | overlap 2416349 2416379 GCTATGTGGGATCAT CGG-TGGCTGGTTAAC ATA GTTCAGC-GCCATCCG TTTTTGTTGTTTAGG YPDSF_2143 2419165 - 2416673 - | nitrate reductase TERM 2611 2418129 - 2418144 + g 86 -5.4 -5.26918 | gap 1 TGATCTTCTGGTACA CCGCTCA TTT TG-GCGG TTTTTTCTAACGTGT YPDSF_2144 2419428 - 2419162 - | assembly protein for periplasmic nitrate reductase YPDSF_2145 2419921 - 2419418 - | ferredoxin-type protein NapF TERM 2612 2419717 - 2419706 - G 71 -5.8 -4.38154 | overlap 2419671 ACAGGCCTGACAAAA GCTG CACT CAGC ACGTTGAAAATCTAT TERM 2613 2420220 - 2420253 + H 73 -2.6 -5.11613 | opp_overlap 2420223, overlap 2420251 TTCATTTAACGGGAA TAATTACCAAAACA AGACGA TGCTTTGATAATTA TTTTTTAGATAATCT TERM 2614 2420588 - 2420553 - H 80 -9 -3.9578 | ACATACGCTAAATAA TTCGAGTGGCAGGAAG ACAG CCCCCTGCAACTTGAA GTATGACGGGTATAG YPDSF_2146 2420754 - 2421383 + | nitrate/nitrite response regulator protein NarP TERM 2615 2421398 - 2421378 - T 86 -2.6 -5.79595 | opp_overlap 2421378 2421381, overlap 2421381 TTGGAAAATAAAAAA TACTGACA TCCGT TGTCACTA TTTAATGGCCGCTAA YPDSF_2147 2421674 - 2421396 - | hypothetical protein TERM 2616 2422830 - 2422815 - g 70 -9 -3.5511 | overlap 2422813 TCCCAGCTACAAACA CCCGAA GAGT TTCGGG AAATTACGCTACGGG YPDSF_2148 2422089 - 2425220 + | aminoglycoside/multidrug efflux system TERM 2617 2425280 - 2425305 + F 76 -7.6 -4.20783 | AGTCGGTTCTCCCCT GCGGCATG ACGAAAAAAC CATGCCGC TTTATTGCATCAGAT YPDSF_2149 2425451 - 2426035 + | hypothetical protein TERM 2618 2426086 - 2426105 + F 74 -7.8 -4.01564 | overlap 2426087 2426089 CGCGCAATACTCACC CTAGGGCG TCCC CGCCCTAC TTTCTGGCTATTTTA TERM 2619 2426087 - 2426104 + F 83 -11.3 -2.99854 | overlap 2426086 2426089 GCGCAATACTCACCC TAGGGCG TCCC CGCCCTA CTTTCTGGCTATTTT TERM 2620 2426089 - 2426102 + F 71 -9.5 -3.0386 | overlap 2426087 2426086 GCAATACTCACCCTA GGGCG TCCC CGCCC TACTTTCTGGCTATT YPDSF_2150 2426324 - 2426872 + | hypothetical protein TERM 2621 2427038 - 2427060 + T 79 -6.9 -4.58283 | opp_overlap 2427038 GCGGGTAATAAAAAA GGCAGTGCC TCTAC GGTTCTGCC TTTTTGCGAGGATTC TERM 2622 2427060 - 2427038 - T 87 -4.7 -5.4505 | opp_overlap 2427038 GCGGGTAATAAAAAA GGCAGTGCC TCTAC GGTTCTGCC TTTTTGCGAGGATTC YPDSF_2151 2428795 - 2427620 - | sulfatase modifier protein TERM 2623 2427785 - 2427771 - G 71 -5 -4.57073 | overlap 2427773 TACCCTGCGCAAAAA TAGGAT TTC ATCCCA TCGCTGTCCTGATCA TERM 2624 2428405 - 2428432 + g 70 -9.2 -3.54543 | ATCCTTTGCCTGAGC GAGTCACACGGT AGCG ATCGTGTAACTC TTTAGGGCCATCAAT TERM 2625 2428843 - 2428819 - R 79 -10.7 -3.05993 | opp_overlap 2428819 2428838, overlap 2428821 2428835 2428836 TCATGGAGATAGACA GACGGCAAGAA AAA TACTTGCCGCC TTTGGCGGCTTAATT TERM 2626 2428819 - 2428843 + r 73 -8.5 -3.58305 | opp_overlap 2428819 2428821 2428835 2428836, overlap 2428838 TCATGGAGATAGACA GACGGCAAGAA AAA TACTTGCCGCC TTTGGCGGCTTAATT TERM 2627 2428841 - 2428821 - R 74 -9.7 -3.08465 | opp_overlap 2428819 2428838, overlap 2428819 2428835 2428836 ATGGAGATAGACAGA CGGCAAGAA AAA TACTTGCCG CCTTTGGCGGCTTAA TERM 2628 2428838 - 2428852 + r 100 -12.8 -3.39895 | opp_overlap 2428821 2428819 2428836 2428835, overlap 2428819 GCAAGAAAAATACTT GCCGCC TTT GGCGGC TTAATTCATACCAAG YPDSF_2152 2430526 - 2428853 - | sulfatase TERM 2629 2430780 - 2430769 - R 71 -2.2 -5.10497 | AAGCCACTGAAAAAA CACA ATGA TGCG ATATTAAACGGTGAG YPDSF_2153 2432074 - 2431004 - | ABC-transporter, ATP-binding protein YPDSF_2154 2433836 - 2432067 - | binding protein-dependent transport system, inner-membrane component TERM 2630 2433689 - 2433675 - G 74 -2.1 -5.1471 | ATCAGAAAAAATAAA CCTGA ACGCA TCAAG ACTCAGTACCTTTGA TERM 2631 2433919 - 2433888 - R 81 -9.4 -3.75517 | gap 1, overlap 2433889 AGCCGATAAAACCAA GGACTGCGCATGCCC ATA AGGCAAGCGCA-CCC AGATAAAGCCACTAT TERM 2632 2433919 - 2433889 - R 70 -9.6 -2.84587 | overlap 2433888 GCCGATAAAACCAAG GACTGCGCATGCCC ATA AGGCAAGCGCACCC AGATAAAGCCACTAT YPDSF_2155 2435019 - 2433931 - | hypothetical protein TERM 2633 2434114 - 2434131 + g 71 -7.7 -4.03234 | opp_overlap 2434103 AATATCTGACTGATT GGCCAGA ATAT TTTGGCC TTTCTCTGAGAGCAG TERM 2634 2434599 - 2434615 + g 73 -5.1 -4.74706 | opp_overlap 2434601 CAACGGGTTCGTAAG TAGAGCC GTA GGCTTTG TTTTTCCATATTGCC TERM 2635 2435308 - 2435292 - H 71 -9.5 -2.96184 | overlap 2435291 2435294 CAGCAAAATCTAAAG CAGCAAA CAG TTTGCTG ATAAGCCACGGTGTG YPDSF_2156 2435330 - 2435803 + | hypothetical protein YPDSF_2157 2435963 - 2436361 + | hypothetical protein TERM 2636 2436729 - 2436740 + G 71 -7.2 -3.9712 | opp_overlap 2436729 CACCCTGACCACAAA GGCC GCCT GGCC TTTATGATAACCTCC TERM 2637 2436740 - 2436729 - g 71 -7.2 -3.96624 | opp_overlap 2436729 CACCCTGACCACAAA GGCC GCCT GGCC TTTATGATAACCTCC YPDSF_2158 2436363 - 2437490 + | succinyl-diaminopimelate desuccinylase TERM 2638 2437566 - 2437590 + G 71 -7.9 -4.08767 | gap 1 TAAGTGGCGCTCATC GCCTACAGCC ACAGGC GGCTG-AGGC TTTTCAAGCAATGCA YPDSF_2159 2437487 - 2438164 + | carboxypeptidase YPDSF_2160 2438232 - 2438426 + | hypothetical protein YPDSF_2161 2440731 - 2438680 - | acetyltransferase TERM 2639 2439358 - 2439384 + g 73 -10.8 -3.29043 | overlap 2439359 2439361 CAGCGTTGGTGCCTG CCACTGCCCGCT ATG AGCGGCCAGTGA TTGTGCCACCAGATT TERM 2640 2439359 - 2439383 + g 81 -14.3 -2.57211 | overlap 2439358 2439361 AGCGTTGGTGCCTGC CACTGCCCGCT ATG AGCGGCCAGTG ATTGTGCCACCAGAT TERM 2641 2439361 - 2439381 + g 71 -11.1 -2.82623 | overlap 2439359 2439358 CGTTGGTGCCTGCCA CTGCCCGCT ATG AGCGGCCAG TGATTGTGCCACCAG TERM 2642 2439842 - 2439830 - G 76 -3.3 -5.16237 | overlap 2439831 AATTTCAGTAAAAAA CCACG CCC CGTGC CCTCATATCCCTGTA YPDSF_2162 2441185 - 2440733 - | hypothetical protein YPDSF_2163 2442145 - 2441279 - | hypothetical protein TERM 2643 2441763 - 2441750 - G 76 -5.9 -4.63218 | TGCCGGGCAATAAAA CGGCC CCAT GACCG ACTGACCGGTACCAC YPDSF_2164 2443077 - 2442364 - | phosphoribosylaminoimidazole-succinocarboxamide synthase TERM 2644 2443147 - 2443123 - R 100 -9.9 -4.49556 | opp_overlap 2443126, overlap 2443125 2443126 TCGTCATGAAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCATATGCGCCTAT TERM 2645 2443145 - 2443125 - R 100 -12.5 -3.85603 | opp_overlap 2443126, overlap 2443123 2443126 GTCATGAAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 2646 2443144 - 2443126 - R 100 -16 -2.90639 | opp_overlap 2443126, overlap 2443125 2443123 TCATGAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 2647 2443126 - 2443144 + r 100 -16 -4.8048 | opp_overlap 2443125 2443123 2443126 TCATGAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC YPDSF_2165 2443683 - 2443225 - | transposase for the IS1541 insertion element TERM 2648 2443796 - 2443814 + r 100 -16 -4.37092 | opp_overlap 2443796 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAT TERM 2649 2443814 - 2443796 - R 100 -16 -3.07307 | opp_overlap 2443796 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAT TERM 2650 2443832 - 2443855 + r 100 -13.2 -5.18371 | opp_overlap 2443832 2443837 TTCTGGGCACAATAA CTAAAGGGGC CGAA GCCCCTTTGG TTTTATTTTATCGCG TERM 2651 2443855 - 2443832 - R 88 -11 -3.78934 | opp_overlap 2443832, overlap 2443837 TTCTGGGCACAATAA CTAAAGGGGC CGAA GCCCCTTTGG TTTTATTTTATCGCG TERM 2652 2443850 - 2443837 - R 85 -9.5 -4.11664 | opp_overlap 2443832, overlap 2443832 GGCACAATAACTAAA GGGGC CGAA GCCCC TTTGGTTTTATTTTA YPDSF_2166 2444916 - 2443858 - | lipoprotein TERM 2653 2444247 - 2444280 + g 82 -10.9 -3.86822 | GCGTACCGACTTTAC GTGAGGCCTGACTGC TCTC GCTGTCAGCCCGCAC TTTATCCAAACCTTC YPDSF_2167 2445833 - 2444934 - | dihydrodipicolinate synthase TERM 2654 2445915 - 2445926 + H 93 -2.2 -6.15717 | ACTGTGTTGTAAGCG CTTG GCAG CAGG TTTTTTTTATGTTTA TERM 2655 2446112 - 2446126 + G 71 -6.4 -4.36554 | CGGCTGGCTATGTTC GGTGAG GAG TTCACC TTTATTATGCTGCTG gcvR 2445935 - 2446549 + | glycine cleavage system transcriptional repressor bcp 2446552 - 2447022 + | thioredoxin-dependent thiol peroxidase TERM 2656 2447079 - 2447064 - T 100 -10.4 -4.34711 | opp_overlap 2447066 AAAATTAACGGAAAA GAGCGC TCTG GCGCTC TTGAGGTTATTGACA YPDSF_2170 2448384 - 2447689 - | hypothetical protein YPDSF_2171 2448708 - 2448562 - | hypothetical protein YPDSF_2172 2450048 - 2448984 - | membrane protein TERM 2657 2449475 - 2449462 - G 74 -9.5 -3.53091 | ACCTGCCCGGCCAAA CCGCG GTTA CGCGG CAAAACACGGCGCAC TERM 2658 2449853 - 2449832 - G 70 -8.7 -3.63897 | overlap 2449830 CAAATAGCACAAATA CGATACTGG CCGC CCAGGATCG TGAACAACCAATACG YPDSF_2173 2450379 - 2451863 + | hypothetical protein YPDSF_2174 2451970 - 2452326 + | arsenate reductase YPDSF_2175 2453245 - 2452538 - | DNA replication initiation factor TERM 2659 2453355 - 2453331 - R 88 -9.9 -4.15788 | opp_overlap 2453334, overlap 2453333 2453334 AATTTGGTGAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCATATGCGCCTAT TERM 2660 2453353 - 2453333 - R 100 -12.5 -3.6761 | opp_overlap 2453334, overlap 2453331 2453334 TTTGGTGAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 2661 2453334 - 2453352 + r 100 -16 -4.8048 | opp_overlap 2453334 2453333 2453331 TTGGTGAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 2662 2453352 - 2453334 - R 100 -16 -2.80244 | opp_overlap 2453334, overlap 2453333 2453331 TTGGTGAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC YPDSF_2176 2453891 - 2453433 - | transposase for the IS1541 insertion element TERM 2663 2454022 - 2454004 - R 100 -16 -3.07307 | opp_overlap 2454004 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 2664 2454004 - 2454022 + r 100 -16 -4.36914 | opp_overlap 2454004 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 2665 2454058 - 2454041 - R 100 -8.4 -5.24129 | opp_overlap 2454041 TCTGGGCACAAAAAA GCCGAC TTTCAC GTCGGC TATCATCGTTATTTA upp 2454693 - 2454067 - | uracil phosphoribosyltransferase YPDSF_2178 2455090 - 2456133 + | phosphoribosylaminoimidazole synthetase TERM 2666 2456435 - 2456447 + G 76 -7.7 -4.36262 | ATGCCAAGGCTTTTA CTGAC CGC GTCAG TTTTGATCTGGCTCT purN 2456248 - 2456886 + | phosphoribosylglycinamide formyltransferase YPDSF_2180 2457115 - 2457660 + | spermidine acetyltransferase TERM 2667 2457665 - 2457684 + T 88 -10 -4.20768 | AAAATGCTTAATACG TTGGGGTC AGAT GGCCCCAA TTGTTTCTTCCCCGT YPDSF_2181 2458587 - 2457754 - | hypothetical protein TERM 2668 2458088 - 2458078 - G 74 -2.4 -5.06414 | opp_overlap 2458084 2458086 GTGCTGTAAGAAAAA GGGC CAT GCCT GTTGAGACCAGGTAT TERM 2669 2458221 - 2458211 - G 74 -6.8 -4.37658 | AATTGTGTCATAAAA TGCC CCA GGCA AGCCAATAACACCTT YPDSF_2182 2458943 - 2458563 - | hypothetical protein YPDSF_2183 2459969 - 2459157 - | phosphate transport ATP-binding protein YPDSF_2184 2461694 - 2459997 - | phosphate transport system permease TERM 2670 2461046 - 2461061 + g 70 -3.2 -4.77173 | TGCTGTCTAAATCTC CGGC AATTTGCA GCCG TTTCTTTTGTAACCG YPDSF_2185 2463925 - 2461694 - | phosphate transport system permease TERM 2671 2462985 - 2462995 + g 74 -8.2 -4.09685 | opp_overlap 2462984 GTCAAATGGAACGAT GGGC TTG GCCC TTTTCGCACATCAAA YPDSF_2186 2464196 - 2466259 + | polyphosphate kinase TERM 2672 2467337 - 2467325 - g 71 -6.3 -4.37092 | overlap 2467331 ATGGTTGGCACAAAA TACCA AGC TGGTA CAGCCCCAACTGGAA YPDSF_2187 2466270 - 2467829 + | exopolyphosphatase TERM 2673 2467882 - 2467846 - f 86 -8 -4.65916 | gap 1, opp_overlap 2467849, overlap 2467848 CTGACGCTAATAAAA TCG-TGCACCGGGTGGT TGTC ATCACCCGGTGCGTCAA TTGACAGCATGAGCG TERM 2674 2467849 - 2467878 + F 100 -16.5 -2.52676 | opp_overlap 2467848 2467846 ACGCTAATAAAATCG TGCACCGGGTGGT TGTC ATCACCCGGTGCG TCAATTGACAGCATG YPDSF_2188 2467941 - 2468153 + | hypothetical protein YPDSF_2189 2468205 - 2469680 + | divalent cation transport protein YPDSF_2190 2469820 - 2471172 + | putative chaperone TERM 2675 2471189 - 2471216 + T 100 -9.9 -5.09204 | overlap 2471185 CCCTATTATGTTCAC CTCTCAGTGAG TTATCT CGCACTGAGAG TTTTTGTTGGCGTAT YPDSF_2191 2472292 - 2471444 - | ABC transporter permease YPDSF_2192 2473619 - 2472354 - | ABC transporter permease TERM 2676 2473196 - 2473217 + g 82 -11.6 -3.70149 | TGATTAGCGCTTCAC GTACCGGC CCTTCA GCCGGTAC TTTCCGTAGTGTCGA YPDSF_2193 2474694 - 2473666 - | transport system periplasmic protein TERM 2677 2473767 - 2473745 - G 74 -7.6 -4.13767 | TTGTTCATGGGAAAA GCCTCAGCCA GGT TGGCTGGCGC AGTGGGTAAATTAGC YPDSF_2194 2476060 - 2474747 - | 4-aminobutyrate aminotransferase TERM 2678 2474975 - 2475004 + g 70 -4.3 -4.62783 | gap 1 TCCACGCGCACGAAT GCCCACAATGGCCG CAT TGCTCATT-TGGGC TTTTTCCAGTACGTC TERM 2679 2476911 - 2476899 - g 73 -9.1 -3.67597 | GCCTGGATTGAAGAA CCCAG CTA CTGGG GGATCCGCAACGTGT TERM 2680 2477246 - 2477233 - g 76 -8.1 -4.26076 | GTACCTTCAGTAAAA CCCTG TATC CAGGG ATGCGTATCAGCTAC TERM 2681 2477619 - 2477602 - g 73 -5.5 -4.68593 | gap 1, opp_overlap 2477603 2477604, overlap 2477603 2477604 GCTATTACTTAAAAA GTCCCCCG CGA CGAGGG-C TGTTACTCGGTTATG YPDSF_2195 2476218 - 2477723 + | GntR family regulatory protein YPDSF_2196 2478106 - 2479191 + | ABC transporter ATP-binding protein TERM 2682 2479551 - 2479540 - f 75 -2.2 -5.31877 | gap 1, overlap 2479541 AGCCACGATAAAAAA GGACG CTT CG-CC ATCATGAAATCTCAA YPDSF_2197 2479555 - 2480889 + | multidrug efflux system subunit MdtA TERM 2683 2480908 - 2480933 + G 71 -6.1 -4.30719 | gap 1, opp_overlap 2480895 2480910, overlap 2480912 2480921 AAGTGATGCCTCCAA CACCCGGTGGCG GGC CGTCAC-GGCTG TTTATTCTGCGCCCG TERM 2684 2480921 - 2480931 + G 70 -8.2 -3.75817 | overlap 2480912 2480908 AACACCCGGTGGCGG GCCG TCA CGGC TGTTTATTCTGCGCC TERM 2685 2481742 - 2481726 - g 76 -5.8 -4.67697 | overlap 2481727 GCGGAAAATAACAAA CTGGCC GCCTG GGCCAA TACTCAATCAGCAAT TERM 2686 2482510 - 2482545 + G 77 -9 -3.97042 | CGTGGCTGACCCTAA GTGTCGCGTTCAGCAC ACTG GTGCTGACGGTGATAC TTTACTTGCTGATCC YPDSF_2198 2480889 - 2484047 + | multidrug efflux system subunit MdtB TERM 2687 2487558 - 2487599 + G 100 -10.8 -4.75404 | gap 1 GCGTTTGTCACACTG CCCGGCCAG-ATTGGGCCA TTAGT TGGCCCGGCGCTGGGCGGG TTTTTAGTGGAATTT TERM 2688 2488192 - 2488211 + G 72 -8.6 -3.9461 | CAATCATGGGTTGGA CACTGCTG ATGC CAGTAGTG TTATTCTTCCAAGGC YPDSF_2201 2487135 - 2488532 + | multidrug efflux system protein MdtE TERM 2689 2489567 - 2489555 - g 78 -4.1 -5.18726 | CTTCCAGAACAAAAA GATGA CCA TCACC GCCCACCTGCCTGAA YPDSF_2202 2488563 - 2489948 + | signal transduction histidine-protein kinase BaeS YPDSF_2203 2489958 - 2490677 + | DNA-binding transcriptional regulator BaeR YPDSF_2204 2490814 - 2491152 + | hypothetical protein TERM 2690 2491212 - 2491234 + F 79 -7.7 -4.32046 | ACGACCACTTATCCC TGCGCGG GGCCATTAA CCGCGCA TTTCATTTTTGCACG YPDSF_2205 2491427 - 2492821 + | protease TERM 2691 2492841 - 2492859 + F 85 -6 -5.17353 | opp_overlap 2492841 ATTCAATAAAATGAA TGCCAC AGATAAA GTGGCA TTTTTTAGTAAATAT TERM 2692 2492975 - 2493002 + F 100 -13.5 -5.43553 | AGGAACCACCTCCTT GGCTAGCCCAA TCTCCC TTGGGCTGGCC TTTTCTTTTTTCCCT TERM 2693 2494222 - 2494188 - g 74 -6.5 -4.36508 | gap 1, overlap 2494185 TGAGAAAAATAAGAA TGTTATCGACGCCACG GTAC CTTGGC-TCGATATCA CTGCACCGAACGATA YPDSF_2206 2493457 - 2494347 + | lipid kinase TERM 2694 2494571 - 2494531 - T 76 -6.7 -4.56113 | opp_overlap 2494541 2494542, overlap 2494533 AACAGAGTAAATAAA CAGCGGAGCACGGCGAGAA CCG CCCTTGTCTTGCTCCGCCA TTGGCGATTCGGGGC TERM 2695 2494569 - 2494533 - T 81 -9.3 -3.8721 | opp_overlap 2494541 2494542, overlap 2494531 CAGAGTAAATAAACA GCGGAGCACGGCGAGAA CCG CCCTTGTCTTGCTCCGC CATTGGCGATTCGGG TERM 2696 2494624 - 2494601 - T 73 -8.2 -3.61715 | CATTGTTGGCAATAA GTCATCACTC ATAA GAGTCATGAC GTGCAAAACTCAGCG YPDSF_2207 2495143 - 2494634 - | hypothetical protein TERM 2697 2495586 - 2495575 - g 82 -7.2 -4.74518 | opp_overlap 2495577 AATTATCAAAACAAA CGCG GTAC CGCG AACGGTTTTGTCATT YPDSF_2208 2495374 - 2496261 + | hypothetical protein TERM 2698 2496392 - 2496345 - T 79 -10.7 -3.08508 | gap 1, opp_overlap 2496352, overlap 2496342 2496349 CATTGGTGAAAATGA TGAACAGGCCCGATGCCCTG CCCCACCTC CAGGGTATCGG-CCTGTTCC AGCGCACGTTGCAAA YPDSF_2209 2497123 - 2496323 - | phosphomethylpyrimidine kinase TERM 2699 2496388 - 2496349 - G 72 -10.1 -3.37533 | gap 1, opp_overlap 2496352, overlap 2496345 2496342 GGTGAAAATGATGAA CAGGCCCGATGCCCTG CCCCACCTC CAGGGTATCGG-CCTG TTCCAGCGCACGTTG TERM 2700 2496979 - 2496989 + g 74 -6.8 -4.36914 | GATAAACCGACTGCA CACC ACG GGTG TTTTGTGCCACCAGC TERM 2701 2497186 - 2497168 - H 75 -8.9 -3.57561 | GGCTAATGGCGTAAA TTCAGCC GCAGT GGCTGAA AAGAGAACGGCAGGT YPDSF_2210 2497645 - 2498112 + | membrane protein YPDSF_2211 2498171 - 2498458 + | hypothetical protein TERM 2702 2498506 - 2498485 - T 84 -10.1 -3.74693 | TGCCACCGTATTAAA GGTGATCGC TCAG GCGGTCACC GAACTCGATAATAAA YPDSF_2212 2499688 - 2498480 - | transposase for the IS285 insertion element TERM 2703 2500163 - 2500173 + G 76 -6.8 -4.49377 | GCTAAAATAGCCATT GTCG CGG CGAC TTCTTTTATTGTAGG YPDSF_2213 2499713 - 2500414 + | membrane protein TERM 2704 2501279 - 2501269 - T 70 -2.6 -4.96848 | CTTTGTAGATAAAAA TAAA ATA TTTA ACAAGAAAATAATTT TERM 2705 2502773 - 2502741 - T 100 -11.3 -5.1286 | opp_overlap 2502748, overlap 2502747 2502748 TAAAAACCATAAAAA TAAATATCCTCCGGC ATA GCCGGAGGTTTTTCA TATGCGCCTATAAGG TERM 2706 2502767 - 2502747 - T 100 -12.5 -4.09508 | opp_overlap 2502748, overlap 2502741 2502748 CCATAAAAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 2707 2502748 - 2502766 + T 100 -16 -4.8048 | opp_overlap 2502748 2502747 2502741 CATAAAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 2708 2502766 - 2502748 - T 100 -16 -3.04078 | opp_overlap 2502748, overlap 2502747 2502741 CATAAAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC YPDSF_2214 2503305 - 2502847 - | transposase for the IS1541 insertion element TERM 2709 2503436 - 2503418 - R 100 -16 -3.07307 | opp_overlap 2503418 2503432 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAC TERM 2710 2503418 - 2503436 + r 100 -16 -4.36914 | opp_overlap 2503418, overlap 2503432 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAC TERM 2711 2503458 - 2503477 + r 70 -7.8 -3.58343 | opp_overlap 2503458, overlap 2503432 GGGCACAACAAAAAA CCGCCTAA TATT TAAGGCGG TTTCAGACTGCTGGC TERM 2712 2503477 - 2503458 - R 100 -7.8 -5.55769 | opp_overlap 2503432 2503458 GGGCACAACAAAAAA CCGCCTAA TATT TAAGGCGG TTTCAGACTGCTGGC TERM 2713 2503613 - 2503632 + r 84 -6.4 -4.98616 | opp_overlap 2503613 GTCAATAACCTCAAA CCGCCT AATATTCA AGGCGG TTTTTGCTATTTTCA guaA 2505257 - 2503680 - | bifunctional GMP synthase/glutamine amidotransferase protein TERM 2714 2505424 - 2505394 - R 100 -9.9 -5.79595 | opp_overlap 2505394 2505397 2505398 TTTTAAAATAAAAAA TAACCATCTGATG GCCAG CACCAGATGATTA TTTAACTAATTGTTA YPDSF_2216 2506900 - 2505437 - | inositol-5-monophosphate dehydrogenase TERM 2715 2506361 - 2506377 + g 70 -2.2 -5.00616 | overlap 2506363 GACCAACACTTTCTC TACACG TTTTT CGTGCA TTTTTTGCAGCACAA xseA 2507070 - 2508449 + | exodeoxyribonuclease VII large subunit YPDSF_2218 2508806 - 2508582 - | hypothetical protein YPDSF_2219 2509811 - 2508855 - | hypothetical protein TERM 2716 2509962 - 2509951 - R 85 -2.2 -5.77988 | ATATAGAGAAAAAAA CCAG GCTA CTGA CAAACCCCGATGACG TERM 2717 2510039 - 2510013 - R 86 -10.1 -3.9749 | gap 1, overlap 2510014 AGGCAGAAGAGTAAA GTGTCCGCGCCA GAGA TGGCGCGG-CTC AAGCTCCCAAGGAAG engA 2511645 - 2510158 - | GTP-binding protein EngA TERM 2718 2511748 - 2511726 - R 100 -13.4 -4.27117 | opp_overlap 2511726, overlap 2511705 TTTTTAGAATACAAA CGGCCCCTGA GTC CCAGGAGCCG TTTTTGAGGTACTGG TERM 2719 2511726 - 2511748 + r 100 -10.5 -4.63527 | opp_overlap 2511705 2511726 TTTTTAGAATACAAA CGGCCCCTG AGTCC CAGGAGCCG TTTTTGAGGTACTGG YPDSF_2221 2512974 - 2511793 - | outer membrane protein assembly complex subunit YfgL YPDSF_2222 2513621 - 2512986 - | hypothetical protein hisS 2514909 - 2513635 - | histidyl-tRNA synthetase ispG 2516245 - 2515118 - | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase TERM 2720 2515161 - 2515177 + g 74 -9.5 -3.55203 | ACAATCCGGTTATTC GCATCAA GAA TTGATGC TTTGGCACGAATTTT TERM 2721 2516122 - 2516133 + g 73 -5.8 -4.44797 | opp_overlap 2516115, overlap 2516130 GGGCAACAGTGGCAT CCAC ATCC GTGG TTTTGGTATTGGTCA YPDSF_2225 2517344 - 2516307 - | hypothetical protein YPDSF_2226 2518083 - 2517334 - | fimbrial biogenesis protein YPDSF_2227 2519433 - 2518237 - | hypothetical protein TERM 2722 2519568 - 2519529 - R 100 -13.6 -4.11906 | opp_overlap 2519529 2519531, overlap 2519534 AGAATGTATAAATAA TAGAACGCCCCAGCAGAG CTGT CTCTACTGGGGCGTGGCA TTGTACAAATTTTAA TERM 2723 2519529 - 2519568 + r 74 -9.2 -3.36518 | opp_overlap 2519529 2519534, overlap 2519531 AGAATGTATAAATAA TAGAACGCCCCAGCAGAG CTGT CTCTACTGGGGCGTGGCA TTGTACAAATTTTAA TERM 2724 2519531 - 2519567 + r 80 -11.6 -2.61429 | gap 1, opp_overlap 2519529 2519534, overlap 2519529 AATGTATAAATAATA G-AACGCCCCAGCAGAG CTGT CTCTACTGGGGCGTGGC ATTGTACAAATTTTA TERM 2725 2519563 - 2519534 - R 100 -20.1 -3.93744 | opp_overlap 2519531 2519529, overlap 2519529 GTATAAATAATAGAA CGCCCCAGCAGAG CTGT CTCTACTGGGGCG TGGCATTGTACAAAT ndk 2520123 - 2519695 - | nucleoside diphosphate kinase TERM 2726 2519825 - 2519807 - G 70 -3 -4.86033 | opp_overlap 2519810 2519818, overlap 2519808 AAACTGTCAGAAAAA TCAGCACG TAG CGTACCGG CTAGTGCGTTATCTG YPDSF_2229 2522870 - 2520450 - | hypothetical protein TERM 2727 2521045 - 2521033 - G 71 -6.3 -4.37092 | ACCGTCTCGATAAAA TGGTA ATC TACCA GTGCCAGTTCATAAC TERM 2728 2521992 - 2521971 - G 76 -3.1 -5.17507 | AAAACGCAATAAAAA TGACAAA TTACTACT TTTGTCA CTTAAATTAAACAAA TERM 2729 2522376 - 2522386 + g 76 -3.2 -5.12068 | GACTGTAGTTTGCAT TCCT GGA GGGA TTTTTATTGAATATA TERM 2730 2524722 - 2524699 - g 83 -5.2 -5.13521 | overlap 2524702 AAAGCAGCTAAAAAA GAACTTGACG CTAT CGCCAAGGCC CAAAAAGCAGTTGAG TERM 2731 2524719 - 2524702 - g 82 -7.7 -4.64763 | overlap 2524699 GCAGCTAAAAAAGAA CTTGACG CTAT CGCCAAG GCCCAAAAAGCAGTT TERM 2732 2525035 - 2525018 - g 76 -6.3 -4.67942 | gap 1 CGGAACAAACTAAAA CAGCC-CT TGA AGCGGCTG AAAAAGCTAAAGAAG YPDSF_2230 2523586 - 2528064 + | autotransporter protein TERM 2733 2528154 - 2528179 + F 100 -11.1 -4.7078 | opp_overlap 2528153 2528152 2528154 TGACTGATAAAAACC GCAGGGGGCTG CAAT TGGCTCCCTGC TTTTTACCTGATTAA YPDSF_2231 2528622 - 2531780 + | hypothetical protein YPDSF_2232 2531746 - 2532066 + | hypothetical protein TERM 2734 2532200 - 2532181 - T 81 -10.7 -3.32997 | GTGGCAGAAATGGAA GGGAGCC TCTATT GGCTCCC TGAGGTTATTGACAA TERM 2735 2532278 - 2532304 + T 72 -10.1 -2.88849 | gap 1, opp_overlap 2532267, overlap 2532273 2532279 ACATCCATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCTCTGCC TERM 2736 2532279 - 2532305 + T 84 -10.1 -3.82218 | gap 1, opp_overlap 2532267, overlap 2532273 2532278 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCTCTGCCT TERM 2737 2532366 - 2532385 + T 79 -10.7 -3.11281 | overlap 2532365 2532362 GTTTGTCAGCAGTCT GGGAGCC TCTATT GGCTCCC TATCCTTTTAGATAC YPDSF_2233 2533357 - 2532404 - | enhanced serine sensitivity protein SseB TERM 2738 2532796 - 2532818 + g 86 -13.4 -3.61715 | TGTCTACCACCATTT CAGCGGGTTG CAC CAACCCGCCG TTCTTCAACAGCATC TERM 2739 2533084 - 2533062 - G 70 -8.5 -3.7398 | gap 1, overlap 2533060 TCCCAATGCAAAATA TTCACC-CCG TTAG CGGTGGTGAA ACTCATTTCGCCATC TERM 2740 2533414 - 2533388 - R 78 -10.1 -3.42459 | opp_overlap 2533392 2533412, overlap 2533382 2533392 CATCGAGAAGATGAA CGAAGGGACGC CAAAT GCGCCCCTTTG AGTCTTCTCAATTCA TERM 2741 2533392 - 2533410 + r 70 -7.3 -3.79071 | opp_overlap 2533388 2533382 2533392 GAGAAGATGAACGAA GGGACGC CAAAT GCGCCCC TTTGAGTCTTCTCAA TERM 2742 2533410 - 2533392 - R 76 -9.5 -3.4684 | opp_overlap 2533392, overlap 2533388 2533382 GAGAAGATGAACGAA GGGACGC CAAAT GCGCCCC TTTGAGTCTTCTCAA YPDSF_2234 2534734 - 2533436 - | aminopeptidase B TERM 2743 2533826 - 2533847 + g 71 -6.5 -4.25104 | opp_overlap 2533841 GCCGGTTAAGGTGGC TGCGTCGAT AATC AACGGCGCA TTTTGCTCGGAGGCA TERM 2744 2534863 - 2534848 - R 100 -8.2 -5.49234 | ATACGCAATAAAAAA GGCCGC TTGC GCGACC CAGTCAGTATTCACT YPDSF_2235 2535074 - 2534874 - | hypothetical protein YPDSF_2236 2535439 - 2535104 - | ferredoxin hscA 2537340 - 2535442 - | chaperone protein HscA TERM 2745 2535504 - 2535473 - G 91 -15.2 -3.56568 | GAATGACCCGCTAAA GCACGGCGAATGGA AGCG TCCATCCGGCGTGC GGCAAAATCTTGCGT TERM 2746 2535613 - 2535592 - G 86 -13.7 -3.61398 | opp_overlap 2535589 CTGCTGCTGTAATAA CGCGACCGC TTGG GCGATCGCG GCACTTTCTTGCTCA hscB 2538107 - 2537583 - | co-chaperone HscB iscA 2538541 - 2538218 - | iron-sulfur cluster assembly protein YPDSF_2240 2539197 - 2538811 - | scaffold protein YPDSF_2241 2540457 - 2539228 - | aminotransferase YPDSF_2242 2541005 - 2540511 - | DNA-binding transcriptional regulator IscR YPDSF_2243 2541934 - 2541161 - | SpoU rRNA methylase family TERM 2747 2541818 - 2541855 + g 87 -9.5 -4.29738 | gap 1, opp_overlap 2541808 2541821 2541838 AGAATCTGGTTTTAC CAAT-GGATTAACCAA ATATAGA TTGGTTAATCCCATTG TTTTCATGGCTCTGG YPDSF_2244 2542053 - 2542856 + | inositol monophosphatase TERM 2748 2542887 - 2542910 + T 100 -8.9 -5.7946 | gap 1, opp_overlap 2542887 CGTTTCAGATAAAAA GCCAGTCAGG GTTAG CC-GACTGGC TTTTTTTATTGGGAA TERM 2749 2542910 - 2542887 - T 100 -10.3 -4.96848 | opp_overlap 2542887 CGTTTCAGATAAAAA GCCAGTCAG GGTTAG CCGACTGGC TTTTTTTATTGGGAA YPDSF_2245 2543977 - 2542955 - | hypothetical protein YPDSF_2246 2544642 - 2543968 - | hypothetical protein TERM 2750 2544360 - 2544346 - G 72 -10 -3.36073 | overlap 2544344 TATATCGGTGAAATA GTGCTG CCC CAGCAC ATTAGCCATCACTTC TERM 2751 2546056 - 2546083 + G 79 -12.8 -3.03781 | opp_overlap 2546057, overlap 2546053 TATGTTTTGCAATCA ACTGAATCAGCG CCGC CGCTGATTCAGA TATCATTTCCGTTAA TERM 2752 2546082 - 2546057 - g 100 -16.3 -3.33815 | opp_overlap 2546056 2546053 ATGTTTTGCAATCAA CTGAATCAGCG CCGC CGCTGATTCAG ATATCATTTCCGTTA YPDSF_2247 2544784 - 2546145 + | stationary phase inducible protein CsiE YPDSF_2248 2547299 - 2546142 - | putative 3-phenylpropionic acid transporter TERM 2753 2547632 - 2547648 + r 72 -6.5 -4.3534 | opp_overlap 2547633, overlap 2547633 TGTCAGCAATTTGAA ACCACCA TTA TGGTGGG TTTTCATGGTTAGGA TERM 2754 2547633 - 2547647 + r 74 -10 -3.20722 | opp_overlap 2547633, overlap 2547632 GTCAGCAATTTGAAA CCACCA TTA TGGTGG GTTTTCATGGTTAGG TERM 2755 2547647 - 2547633 - R 80 -10 -3.67976 | opp_overlap 2547632 2547633 GTCAGCAATTTGAAA CCACCA TTA TGGTGG GTTTTCATGGTTAGG YPDSF_2249 2548220 - 2547669 - | attachment invasion locus protein YPDSF_2250 2548551 - 2548330 - | membrane protein TERM 2756 2548650 - 2548629 - R 95 -11.5 -3.86202 | CCCGATGAGATCAAA GCCCCGGCC AGGA GGCCAGGAC GGTGACAGCCGCCTT glyA 2549917 - 2548664 - | serine hydroxymethyltransferase TERM 2757 2550303 - 2550315 + H 80 -6.3 -4.87626 | overlap 2550312 AGAATTATCCTCATA TTCAC TAT GTGAA TTTTTCATCTTCAGC YPDSF_2252 2550458 - 2551648 + | nitric oxide dioxygenase TERM 2758 2551685 - 2551712 + F 80 -9.9 -3.695 | overlap 2551686 CTACGCACTTAATGC CGCTGATCAGG AAGGTA CCTGATCAGCA TTTCGGCTATTTCAA TERM 2759 2551686 - 2551711 + F 93 -13.4 -2.81218 | overlap 2551685 TACGCACTTAATGCC GCTGATCAGG AAGGTA CCTGATCAGC ATTTCGGCTATTTCA TERM 2760 2551913 - 2551931 + F 100 -13.2 -4.01078 | CCAGGGGGTAATCTG CTCTCCTG ATT CAGGAGAG TTTATGGTCACTTTT YPDSF_2253 2551935 - 2552957 + | transposase for insertion sequence IS100 TERM 2761 2553038 - 2553024 - g 77 -11.4 -3.3506 | overlap 2553015 TGGAAAGCCTTATAA GCGCAG CGC CTGCGC TGTCACAACAGGCAG YPDSF_2254 2552957 - 2553736 + | transposase/IS protein YPDSF_2255 2554072 - 2554971 + | hypothetical protein TERM 2762 2555101 - 2555076 - T 91 -6.2 -5.50499 | gap 1, opp_overlap 2555076 TTATATGTAAAAAAA CCCGCATCGTT TTGGC AACGA-ACGGG CTTTTGTTATTCAGC YPDSF_2256 2555478 - 2555140 - | nitrogen regulatory protein P-II 1 nadE 2557115 - 2555493 - | NAD synthetase YPDSF_2258 2558612 - 2557275 - | two-component system response regulator TERM 2763 2557628 - 2557617 - GR 74 -7.2 -4.19371 | GAAACTGCGAACAAA CGGC TTAT GCCG CTTAGCCGACTCCCG YPDSF_2259 2559657 - 2558575 - | hypothetical protein TERM 2764 2559571 - 2559555 - GR 89 -7.3 -5.00884 | ACGCTCCCCAAAAAA TCCCTCT GCC AGAGAGA CCGGTCTGTTTCACG YPDSF_2260 2561097 - 2559661 - | two-component system sensor kinase TERM 2765 2561244 - 2561212 - R 100 -11.3 -5.00196 | opp_overlap 2561219, overlap 2561218 2561219 GTTGAAATAACAAAA TAAATATCCTCCGGC ATA GCCGGAGGTTTTTCA TATGCGCCTATAAGG TERM 2766 2561238 - 2561218 - R 100 -12.5 -4.06214 | opp_overlap 2561219, overlap 2561212 2561219 ATAACAAAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 2767 2561219 - 2561237 + r 100 -16 -4.8048 | opp_overlap 2561219 2561218 2561212 TAACAAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 2768 2561237 - 2561219 - R 100 -16 -3.01288 | opp_overlap 2561219, overlap 2561218 2561212 TAACAAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC YPDSF_2261 2561776 - 2561318 - | transposase for the IS1541 insertion element TERM 2769 2561907 - 2561889 - H 100 -16 -3.07307 | opp_overlap 2561889 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 2770 2561889 - 2561907 + H 100 -16 -4.36914 | opp_overlap 2561889 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 2771 2561927 - 2561948 + H 100 -8.1 -5.43866 | gap 1, opp_overlap 2561927 CTGGGCACAAAAAAA GCAC-TTGCT GCG AGCAAAGTGC TTTTTTTAAAGGTTG TERM 2772 2561948 - 2561927 - H 100 -8.1 -5.60993 | gap 1, opp_overlap 2561927 CTGGGCACAAAAAAA GCAC-TTGCT GCG AGCAAAGTGC TTTTTTTAAAGGTTG TERM 2773 2562135 - 2562102 - H 80 -9.8 -3.617 | gap 2, opp_overlap 2562102, overlap 2562100 2562110 2562122 ATAGACAACTAAACA TTGATCAACGGGGCAA TAAA TTGCCCCGTTG--CAA GAATATGTGGATGCC TERM 2774 2562129 - 2562110 - H 100 -13.6 -3.23638 | opp_overlap 2562102, overlap 2562102 2562100 2562122 CTAAACATTGATCAA CGGGGCAA TAAA TTGCCCCG TTGCAAGAATATGTG YPDSF_2262 2563003 - 2563563 + | hypothetical protein TERM 2775 2563846 - 2563832 - f 73 -8.6 -3.68222 | TTTTAAGGTCAACAA CAAGTC AGT GACTTG GATGACAACGGTTAT YPDSF_2263 2563886 - 2564464 + | hypothetical protein TERM 2776 2564540 - 2564512 - T 70 -2.6 -4.98352 | gap 1, overlap 2564519 ATTAAATAAAATAAA CTATATACCCAAA ATAA TTTGAGT-TACAG AAAGGCAACAAGGGA TERM 2777 2564676 - 2564654 - T 90 -11.4 -3.60597 | overlap 2564652 2564657 ATAAATTGATAAAGA GAAGGGTATC TTC AATACCCTTC AGACTGCTGACAAAC TERM 2778 2564673 - 2564657 - T 72 -7.3 -3.91369 | overlap 2564654 2564652 AATTGATAAAGAGAA GGGTATC TTC AATACCC TTCAGACTGCTGACA TERM 2779 2564763 - 2564737 - T 84 -10.1 -3.82218 | gap 1, opp_overlap 2564746, overlap 2564738 2564753 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 2780 2564764 - 2564738 - T 72 -10.1 -2.88849 | gap 1, opp_overlap 2564746, overlap 2564737 2564753 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT YPDSF_2264 2568739 - 2564876 - | phosphoribosylformylglycinamidine synthase TERM 2781 2565819 - 2565832 + g 72 -8.1 -3.95073 | opp_overlap 2565819 2565818, overlap 2565818 TCTGCCCACCACAAG CGCAG AGTG CTGCG TTTCTCGCTGTACAC TERM 2782 2566780 - 2566821 + g 73 -2.9 -5.0538 | gap 1, opp_overlap 2566785 TCTGATCACGGGTGA CCATACCGGTTACCGTGCGG TCG CCG-ATGGTGATCAGGAAGG TTTTTTCCGCTACCG TERM 2783 2567477 - 2567488 + g 76 -5.8 -4.60487 | overlap 2567470 CAATTTGGCCCCCAC GGTG ATTT CACC TTTTTGCACATGATC TERM 2784 2570478 - 2570462 - g 100 -6.5 -5.69068 | overlap 2570473 GAAAAAGAGAAAAAA GCGGC TCAACAT GCCGC CATTGAGGCGGAGCT YPDSF_2265 2569001 - 2570542 + | putative transglycosylase TERM 2785 2570635 - 2570605 - T 79 -11 -3.18912 | overlap 2570606 TGATTTAGTCACCAA CCGCCGCCCGTCAT AAC ATGCTGGGCGGCGC ATCACCTGGCCACCG TERM 2786 2570634 - 2570606 - T 100 -14.5 -2.51133 | overlap 2570605 GATTTAGTCACCAAC CGCCGCCCGTCAT AAC ATGCTGGGCGGCG CATCACCTGGCCACC YPDSF_2266 2571214 - 2570651 - | tRNA-specific adenosine deaminase YPDSF_2267 2572019 - 2571324 - | hypothetical protein murQ 2573133 - 2572246 - | N-acetylmuramic acid-6-phosphate etherase YPDSF_2269 2573341 - 2574180 + | putative DNA-binding transcriptional regulator YPDSF_2270 2574342 - 2574602 + | (4Fe-4S) ferredoxin TERM 2787 2574680 - 2574656 - T 88 -9.9 -4.21974 | opp_overlap 2574659, overlap 2574658 2574659 CCAGTATGCAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCATATGCGCCTAT TERM 2788 2574678 - 2574658 - T 100 -12.5 -3.70709 | opp_overlap 2574659, overlap 2574656 2574659 AGTATGCAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 2789 2574677 - 2574659 - T 100 -16 -2.81702 | opp_overlap 2574659, overlap 2574658 2574656 GTATGCAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 2790 2574659 - 2574677 + T 100 -16 -4.8048 | opp_overlap 2574658 2574656 2574659 GTATGCAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC YPDSF_2271 2575216 - 2574758 - | transposase for the IS1541 insertion element TERM 2791 2575347 - 2575329 - R 100 -16 -3.07307 | opp_overlap 2575329 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAT TERM 2792 2575329 - 2575347 + r 100 -16 -4.37092 | opp_overlap 2575329 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAT TERM 2793 2575386 - 2575368 - R 100 -11.7 -4.48987 | opp_overlap 2575363 2575362 TGGGCACAATGAAAA CCTCCGC CTAAT GCGGAGG TTACCCTTGATAATG YPDSF_2272 2575581 - 2575414 - | ribosome modulation factor TERM 2794 2575827 - 2575786 - R 70 -5.9 -4.3851 | overlap 2575787 GATATTAAATAGAAA CCCCCTTCCCCTGACAAGA TGAT TATTACCAGAGAAAGAGGA TTAGACTGATTTAGA YPDSF_2273 2576429 - 2575851 - | lipoprotein protein YPDSF_2274 2578105 - 2576426 - | paraquat-inducible protein B YPDSF_2275 2579351 - 2578065 - | paraquat-inducible protein A YPDSF_2276 2581393 - 2579480 - | ABC transporter ATPase component TERM 2795 2579617 - 2579597 - G 77 -9.1 -4.07568 | opp_overlap 2579616, overlap 2579601 GTGTGGGCGGGAAAA GAAATCAGT ATC ACTGACTTC AGCCTGTAACTTGCT TERM 2796 2579613 - 2579601 - G 76 -6.3 -4.64861 | overlap 2579597 GGGCGGGAAAAGAAA TCAGT ATC ACTGA CTTCAGCCTGTAACT YPDSF_2277 2583519 - 2581399 - | 23S rRNA m(2)G2445 methyltransferase TERM 2797 2582504 - 2582516 + g 71 -6.2 -4.30576 | AGTGACAGACGCCAG CCGC CAAAT GCGG TTTTCATCATACGGC YPDSF_2278 2583622 - 2584731 + | iron-sulfur binding protein YPDSF_2279 2585308 - 2584757 - | hypothetical protein TERM 2798 2585034 - 2585019 - G 76 -7.6 -4.36914 | GGTTGCTGTACAAAA TGCCAA CTTT TTGGCA TGAGTGGTTTCAAGA YPDSF_2280 2586501 - 2585491 - | dihydroorotate dehydrogenase 2 YPDSF_2281 2589734 - 2587119 - | aminopeptidase N TERM 2799 2589621 - 2589634 + g 74 -3.7 -5.03314 | TTTTACTTTACTGAC CGCCG TTAC CGTCG TTTTTTGCGCATCCA TERM 2800 2589887 - 2589870 - H 93 -4.1 -5.76949 | CAGTTGTAAAAAAAA CCTAGAT GAGA ACCCAGG CAACTCCGGCAAATA TERM 2801 2591368 - 2591353 - g 85 -7.6 -4.77036 | GCGCATTATGAAAAA TTGGGT ATTG ACCCAA TGAAAAAGGTATTGG YPDSF_2282 2590435 - 2591655 + | nicotinate phosphoribosyltransferase asnC 2592154 - 2593554 + | asparaginyl-tRNA synthetase TERM 2802 2593588 - 2593618 + F 100 -9.8 -5.09426 | opp_overlap 2593591 2593596, overlap 2593589 2593591 2593596 AACGTCAATTTGTAC AAATAAAAGCCAGC TCT GCTGGCTTTTATCA TTTTTTAAAATTCGA TERM 2803 2593589 - 2593617 + F 100 -13.3 -3.64933 | opp_overlap 2593591 2593596, overlap 2593588 2593591 2593596 ACGTCAATTTGTACA AATAAAAGCCAGC TCT GCTGGCTTTTATC ATTTTTTAAAATTCG TERM 2804 2593591 - 2593615 + F 100 -15.9 -3.39328 | opp_overlap 2593591 2593596, overlap 2593589 2593588 2593596 GTCAATTTGTACAAA TAAAAGCCAGC TCT GCTGGCTTTTA TCATTTTTTAAAATT TERM 2805 2593615 - 2593591 - f 100 -15.9 -3.89614 | opp_overlap 2593589 2593588 2593591 2593596, overlap 2593596 GTCAATTTGTACAAA TAAAAGCCAGC TCT GCTGGCTTTTA TCATTTTTTAAAATT TERM 2806 2593596 - 2593610 + F 100 -11.4 -4.76171 | opp_overlap 2593591 2593596, overlap 2593591 2593589 2593588 TTTGTACAAATAAAA GCCAGC TCT GCTGGC TTTTATCATTTTTTA TERM 2807 2593610 - 2593596 - f 100 -11.4 -4.99043 | opp_overlap 2593596 2593591 2593589 2593588, overlap 2593591 TTTGTACAAATAAAA GCCAGC TCT GCTGGC TTTTATCATTTTTTA YPDSF_2284 2593852 - 2594934 + | outer membrane porin C protein TERM 2808 2595000 - 2594981 - f 95 -7.8 -5.09426 | opp_overlap 2594981 CCTAAGTTGAAAAAA GACAGGGC CTCG GCTCTGTC TTTTTGTTTCTATTT TERM 2809 2594981 - 2595000 + F 100 -10 -5.48623 | opp_overlap 2594981 CCTAAGTTGAAAAAA GACAGGGC CTCG GCTCTGTC TTTTTGTTTCTATTT TERM 2810 2595046 - 2595062 + F 73 -5.1 -4.62336 | overlap 2595019 2595018 AGATTACTCTGTCTA TCGGC CTATTTT GCCGA TTTTTCACCTCAGAT TERM 2811 2595608 - 2595595 - g 70 -2.3 -5.04325 | GCCAAACCATAAAAA CGTCT TCGA AGCCG CAGGGCTGGAAGTGG YPDSF_2285 2595176 - 2596381 + | aromatic amino acid aminotransferase TERM 2812 2596436 - 2596419 - T 100 -11.3 -4.4767 | opp_overlap 2596422 TGACTGACCATAAAA GGATGGC CCAA GCCATCC TTCAGACTGCTGACA TERM 2813 2596526 - 2596500 - T 84 -10.1 -3.82218 | gap 1, opp_overlap 2596509, overlap 2596501 2596516 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 2814 2596527 - 2596501 - T 72 -10.1 -2.88849 | gap 1, opp_overlap 2596509, overlap 2596500 2596516 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT TERM 2815 2596632 - 2596601 - T 100 -14.6 -2.77013 | opp_overlap 2596608, overlap 2596608 CACTTTGTCAATAAC CTCAAAAGGATGGC CCAA GCCATCCTTTTGAC TGGTCACTCGATGAC TERM 2816 2596625 - 2596608 - T 100 -11.3 -4.24123 | opp_overlap 2596608, overlap 2596601 TCAATAACCTCAAAA GGATGGC CCAA GCCATCC TTTTGACTGGTCACT TERM 2817 2596608 - 2596625 + T 100 -11.3 -4.21462 | opp_overlap 2596601 2596608 TCAATAACCTCAAAA GGATGGC CCAA GCCATCC TTTTGACTGGTCACT TERM 2818 2596711 - 2596682 - T 74 -7.9 -3.94482 | opp_overlap 2596683 2596689, overlap 2596684 2596689 ATAAACGAAAGAGAA CACAAAAGACGCC TTCC GGCATCTTTTGCT ATTGAACATTCATCT TERM 2819 2596709 - 2596684 - T 100 -12.7 -3.53929 | opp_overlap 2596683 2596689, overlap 2596682 2596689 AAACGAAAGAGAACA CAAAAGACGCC TTCC GGCATCTTTTG CTATTGAACATTCAT TERM 2820 2596704 - 2596689 - T 82 -6.8 -4.80729 | opp_overlap 2596683 2596689, overlap 2596684 2596682 AAAGAGAACACAAAA GACGCC TTCC GGCATC TTTTGCTATTGAACA YPDSF_2286 2597452 - 2596805 - | metallo-beta-lactamase superfamily protein YPDSF_2287 2598061 - 2597513 - | hypothetical protein TERM 2821 2598313 - 2598300 - R 71 -2.3 -5.08601 | opp_overlap 2598311 TTATTGCAATAAAAA CTCAG CCTG CTGTG AGATTTGTGCACCAG YPDSF_2288 2600141 - 2598285 - | hypothetical protein TERM 2822 2600351 - 2600319 - R 100 -11.3 -5.26918 | opp_overlap 2600326, overlap 2600325 2600326 AGATGTTACAAAAAA TAAATATCCTCCGGC ATA GCCGGAGGTTTTTCA TATGCGCCTATAAGG TERM 2823 2600345 - 2600325 - R 100 -12.5 -4.17307 | opp_overlap 2600326, overlap 2600319 2600326 TACAAAAAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 2824 2600326 - 2600344 + r 100 -16 -4.8048 | opp_overlap 2600326 2600325 2600319 ACAAAAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 2825 2600344 - 2600326 - R 100 -16 -3.07944 | opp_overlap 2600326, overlap 2600325 2600319 ACAAAAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC YPDSF_2289 2600883 - 2600425 - | transposase for the IS1541 insertion element TERM 2826 2600996 - 2601014 + r 100 -16 -4.37092 | opp_overlap 2600996 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAT TERM 2827 2601014 - 2600996 - R 100 -16 -3.07307 | opp_overlap 2600996 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAT TERM 2828 2601054 - 2601035 - R 90 -7.1 -5.18726 | opp_overlap 2601035 TGGGCACAATAAAAA TGGCCGC TTCTGT GCGACCA TTTAATAAAACTAAT mukB 2605556 - 2601099 - | cell division protein MukB TERM 2829 2602162 - 2602176 + g 72 -8.5 -3.82603 | TCACGGCGGTGCAAG CGGCG CTCAA CGCCG TTATCTTTCACCATT TERM 2830 2604911 - 2604901 - G 71 -6.8 -4.20367 | overlap 2604902 TCTGGCAATAAATAA TCGC GTA GCGA GCGAGTAATGGCGCT YPDSF_2291 2606281 - 2605553 - | condesin subunit E YPDSF_2292 2607584 - 2606262 - | condesin subunit F YPDSF_2293 2608366 - 2607581 - | putative metallothionein SmtA TERM 2831 2607996 - 2607964 - G 70 -4.2 -4.7373 | gap 1, opp_overlap 2607964 2607968, overlap 2607967 2607968 2607977 TTAGCGTATCAAAAA GTATTTGCAGAACCT GCTG AGGTTCAGC-AATCC ATTCTAATACCGCAT TERM 2832 2608085 - 2608099 + g 70 -4.2 -4.7373 | overlap 2608087 TTGTATAAATTGCAT GTTGTG GCT CACACC TTTTTCGTGAGCTGC YPDSF_2294 2610089 - 2609157 - | hypothetical protein TERM 2833 2610392 - 2610368 - R 100 -12.1 -4.15703 | opp_overlap 2610364 GGTTAGAAATAACAA CGCCAGAGCCC GGT AGGTTCTGGCG TAAAGTTTCCGTCGC YPDSF_2295 2611165 - 2610413 - | 3-deoxy-manno-octulosonate cytidylyltransferase YPDSF_2296 2611344 - 2611162 - | hypothetical protein TERM 2834 2611866 - 2611886 + r 100 -12.6 -3.90112 | opp_overlap 2611866 ACGAGAAGGGAGAAA CGGCTACC GATGA GGTAGCCG TTTGCTTAGAAAGCG TERM 2835 2611886 - 2611866 - R 100 -12.6 -4.00468 | opp_overlap 2611866 ACGAGAAGGGAGAAA CGGCTACC GATGA GGTAGCCG TTTGCTTAGAAAGCG YPDSF_2297 2612101 - 2611892 - | cold shock-like protein TERM 2836 2612217 - 2612232 + H 71 -4.6 -4.70046 | opp_overlap 2612218, overlap 2612218 TGATTTTATGAAAAA ACCGCA TAAT TGCGGG TTTTGTAATTTTGTC TERM 2837 2612231 - 2612218 - H 95 -8.1 -5.15634 | opp_overlap 2612217 2612218 GATTTTATGAAAAAA CCGCA TAAT TGCGG GTTTTGTAATTTTGT TERM 2838 2612260 - 2612282 + H 74 -4.3 -4.93877 | gap 1 GTCTATCTTGGTGAA TGATTA-GCA CGCT TGCATAATCA TTTTATTTCCTGAGA TERM 2839 2614195 - 2614164 - g 76 -11 -3.18681 | gap 1, overlap 2614168 2614169 CTGCAACTCTACGAA GCA-ACCCAGCAACG TTC CGTTGCTGAATGTGC AGCCGCCCTCAAACT TERM 2840 2614190 - 2614168 - g 75 -10.6 -3.40639 | overlap 2614164 2614169 AACTCTACGAAGCAA CCCAGCAACG TTC CGTTGCTGAA TGTGCAGCCGCCCTC TERM 2841 2614189 - 2614169 - g 73 -11.9 -2.63901 | overlap 2614168 2614164 ACTCTACGAAGCAAC CCAGCAACG TTC CGTTGCTGA ATGTGCAGCCGCCCT YPDSF_2298 2612820 - 2614229 + | hypothetical protein lpxK 2615223 - 2614237 - | tetraacyldisaccharide 4'-kinase TERM 2842 2615029 - 2615039 + g 71 -6.8 -4.19238 | opp_overlap 2615028 TTCAACCAACCAGAT CACC ACC GGTG TTTTACCGTTCCCCC YPDSF_2300 2616968 - 2615220 - | lipid transporter ATP-binding/permease protein TERM 2843 2616422 - 2616406 - G 74 -6.5 -4.33274 | CTGATATTACGAAAA CGTTTGG ATA CCAGACG GATCGAAATAGACAC TERM 2844 2616654 - 2616632 - G 70 -2.7 -4.78326 | GGTCAAAGAAAGAAA CAGGCATAC CCATC ATATGGCTG AATAAGCGGCGGCGG YPDSF_2301 2619295 - 2617004 - | hypothetical protein TERM 2845 2619796 - 2619777 - R 100 -7.1 -5.81412 | opp_overlap 2619777 TTTACGCAAAAAAAA CGATGCC GATAAG GGCACCG TTTCGTATCAGCGTT ihfB 2620126 - 2619842 - | integration host factor subunit beta rpsA 2621860 - 2620187 - | 30S ribosomal protein S1 cmk 2622726 - 2622034 - | cytidylate kinase TERM 2846 2622535 - 2622518 - G 72 -4.1 -4.86731 | TTCTGTGAAACAAAA CGAACAT CGAG ATGTGCG GCAAGTGGTACCAAT TERM 2847 2622746 - 2622789 + r 76 -11.2 -2.59881 | opp_overlap 2622751 2622782, overlap 2622745 CTCTCCTTTCGGTAG GCAAACCTCT-TGTCTGCCC CCGGCA GGGCAGACACAGAGGTA-GC ATTATACGCTGCATC TERM 2848 2622785 - 2622751 - R 100 -15.9 -3.64703 | gap 1, opp_overlap 2622746 2622745, overlap 2622782 CTTTCGGTAGGCAAA CCTCT-TGTCTGCCCC CGGC AGGGCAGACACAGAGG TAGCATTATACGCTG YPDSF_2305 2624324 - 2623038 - | 3-phosphoshikimate 1-carboxyvinyltransferase TERM 2849 2624492 - 2624445 - R 73 -9.8 -3.02511 | overlap 2624490 CTCATTGTTGCAAGA GGCCCATCGATCCGGAGCGGAT GAGT ACCCGCTCCAGAAAAATCAGCC ATGGCGGCGTTCAAA YPDSF_2306 2625572 - 2624487 - | phosphoserine aminotransferase TERM 2850 2625823 - 2625837 + r 71 -8.6 -3.56568 | opp_overlap 2625823 GACTGGGGTGACAAA TCTGCT GGG AGCAGA TTTGAACGCTGCTTG TERM 2851 2625837 - 2625823 - R 75 -8.6 -3.86015 | opp_overlap 2625823 GACTGGGGTGACAAA TCTGCT GGG AGCAGA TTTGAACGCTGCTTG YPDSF_2307 2627786 - 2625939 - | hypothetical protein YPDSF_2308 2628901 - 2627807 - | hypothetical protein TERM 2852 2627862 - 2627841 - G 76 -12.3 -3.0264 | overlap 2627831 AAACCCGCTGCAACA CCGACACCG CCTT CAGTGTCGG CAGAAACATTGACTC TERM 2853 2629158 - 2629131 - R 100 -13.6 -3.53343 | AATGTCTGGCGGAAA TTTTGCGAAGAC CGTA GCCTTCGCAAAA AAGTCACAGTATCAA ansB 2630207 - 2629170 - | L-asparaginase II TERM 2854 2630989 - 2630976 - g 86 -8.1 -4.62069 | GCGTTATGTGAAAAA CCGCA TTAT TGCGG AGTCCATCAGCTTGC YPDSF_2310 2630356 - 2632122 + | hypothetical protein YPDSF_2311 2632820 - 2633677 + | formate transporter TERM 2855 2634155 - 2634141 - g 76 -2.8 -5.1925 | overlap 2634133 CCACAACTGAAAAAA GTCTTC ACC GAATAC CGTAAAACACATAAC YPDSF_2312 2633733 - 2636015 + | formate acetyltransferase 1 TERM 2856 2636069 - 2636049 - T 90 -11.1 -3.97088 | opp_overlap 2636049 TGTTACAACATGAAA GGCTCCACA TAT TGTGGGGCC TTTATTCATTCAGAG TERM 2857 2636049 - 2636069 + T 100 -13.3 -4.3255 | opp_overlap 2636049 TGTTACAACATGAAA GGCTCCACA TAT TGTGGGGCC TTTATTCATTCAGAG YPDSF_2313 2636807 - 2636133 - | hypothetical protein pflA 2637794 - 2638528 + | pyruvate formate lyase-activating enzyme 1 TERM 2858 2638602 - 2638640 + T 83 -11.2 -3.43033 | gap 3, opp_overlap 2638605 2638606, overlap 2638606 TTAGGTTTGGCCTAA CAACTGCCGCCATGCTGGA TGAA TCC-GC-TGGCGGC-GTTG TCTTATATATTGATA TERM 2859 2638606 - 2638637 + T 81 -9.5 -3.83668 | gap 2, opp_overlap 2638605 2638606, overlap 2638602 GTTTGGCCTAACAAC TGCCGCCATGCTGGA TGAA TCC-GC-TGGCGGCG TTGTCTTATATATTG YPDSF_2315 2639830 - 2638682 - | MFS family transporter TERM 2860 2640018 - 2639996 - R 95 -4.9 -5.76633 | gap 1, opp_overlap 2640001, overlap 2640001 GGATACACAAAAAAA GAAAAGCGCC CGTA GACGCTTT-C GAAATAGCAGATAAC TERM 2861 2640014 - 2640001 - R 95 -5.9 -5.61277 | opp_overlap 2640001, overlap 2639996 CACAAAAAAAGAAAA GCGCC CGTA GACGC TTTCGAAATAGCAGA YPDSF_2316 2641353 - 2640061 - | seryl-tRNA synthetase TERM 2862 2640843 - 2640855 + g 73 -9.1 -3.72576 | GAGCACGGTGCATAC GGGCA ATT TGCCC TTTCATCACCACAAA TERM 2863 2640919 - 2640909 - G 70 -8.2 -3.71672 | opp_overlap 2640909 2640908 CGGCAGCAAAATCAA GGCC ACC GGCC ATTTCGCCCAGAGAA TERM 2864 2641582 - 2641606 + r 93 -9.9 -4.39828 | opp_overlap 2641571 2641570 2641594 TAATGCTAACCTTAC CGCAACCGCAA AGC TAGCGGTAGCG TTTTATCGGGCTATT YPDSF_2317 2642938 - 2641595 - | recombination factor protein RarA TERM 2865 2641944 - 2641927 - G 73 -6.3 -4.44046 | CGCAGGCTAAATAAA CAATTGC CTGG GCAATCG CCCGCTCCCCTTCGG TERM 2866 2642891 - 2642874 - G 80 -10.5 -3.6715 | opp_overlap 2642872 TGATCCAACGTCAAA GGCCGCA TACG CGCGGCC AGTGGTTGAAACTCA lolA 2643557 - 2642949 - | outer-membrane lipoprotein carrier protein YPDSF_2319 2647649 - 2643750 - | cell division protein TERM 2867 2645682 - 2645663 - G 83 -10 -4.14004 | opp_overlap 2645675 CAACATAAGGAGAAA GCGTGAAC AGAG GCTCACGC GGGCTGTCATCGACT TERM 2868 2646003 - 2645973 - G 70 -9.1 -3.57144 | gap 1, opp_overlap 2645990 2645992, overlap 2645974 2645989 TTGCTGATCGGCAAA CGCTTTGC-GCAAG ATAG CCTGCTGCAAAGCA GCATCTTCATCAGAT TERM 2869 2646166 - 2646197 + g 71 -5 -4.54026 | opp_overlap 2646164, overlap 2646170 2646185 GTTGGAATACGAACC GGATTTGGCCGTGG CAAT TCAGGGCCAATACC TTGTTTTATTTGGGA TERM 2870 2646910 - 2646875 - G 72 -3.9 -4.77165 | GGGCTGAGAACAAAA CGTCATCATCGCCAT GGGCTA ACGCCGATGAGGCCG CAACACCCGCCCCCA TERM 2871 2647419 - 2647409 - G 71 -6.8 -4.13767 | TTGCGTAGGCTAAAA CACC AAA GGTG GAAAACAGCGTGTCA TERM 2872 2647714 - 2647688 - R 100 -15.2 -3.14463 | opp_overlap 2647684, overlap 2647691 AACGGGTCTGAGCAA CAACGCCGAGAA GCC TCCCCGGCGTTG AAACTGTATGAATAA TERM 2873 2647711 - 2647691 - R 84 -11.1 -3.71848 | opp_overlap 2647684, overlap 2647688 GGGTCTGAGCAACAA CGCCGAGAA GCC TCCCCGGCG TTGAAACTGTATGAA YPDSF_2320 2648266 - 2647772 - | leucine-responsive transcriptional regulator TERM 2874 2647953 - 2647970 + g 70 -4.2 -4.65895 | GAGACCAAGTGACAC TCTTGA ATTTCC TCAAGA TTTTTAACTGCGGCA TERM 2875 2648946 - 2648966 + H 90 -4 -5.59357 | opp_overlap 2648946 CCTATCAAAAAAATT GCTAACAA CATTT TTGTTTGC TTTTTTTAATGTCAT TERM 2876 2649142 - 2649126 - g 70 -8 -3.66178 | opp_overlap 2649119 CGTGCCAACCTGAAA CCGGTA TTGAT TACCGG GATGGAAAAGGGCGG YPDSF_2321 2649033 - 2649995 + | thioredoxin reductase TERM 2877 2650053 - 2650077 + F 100 -9.2 -5.53079 | overlap 2650054 TTCACCTCGTTCTAT ACGGGTGGCT ACATG GGCCACCCGC TTTTTTATCTGTTTT TERM 2878 2650054 - 2650076 + F 100 -12.7 -3.88187 | overlap 2650053 TCACCTCGTTCTATA CGGGTGGCT ACATG GGCCACCCG CTTTTTTATCTGTTT TERM 2879 2650514 - 2650503 - g 87 -7.2 -5.04249 | overlap 2650505 GGCTGAAAAAACAAA GCGC CCCC GCGC AACGTTGGCTCCGCC TERM 2880 2651301 - 2651322 + G 78 -3.7 -5.19212 | gap 1, overlap 2651302 2651302 TTGGTAGCTATGGCC TCGGCGTAAC GCT GTT-TGCCGG TTTTTTGGTGCTAAT TERM 2881 2652054 - 2652032 - g 73 -9 -3.72893 | CAGTTGGTGATGAAA GCGCTGGAGG AGG CCTCCCGTGC GCAGTCTACCCTGCT YPDSF_2322 2650454 - 2652220 + | cysteine/glutathione ABC transporter membrane/ATP-binding component YPDSF_2323 2652223 - 2653947 + | cysteine/glutathione ABC transporter membrane/ATP-binding component aat 2654166 - 2654876 + | leucyl/phenylalanyl-tRNA--protein transferase infA 2655042 - 2655260 + | translation initiation factor IF-1 TERM 2882 2655319 - 2655344 + T 100 -13.3 -4.36778 | overlap 2655336 GTAGTCCCCCTCCGG CGCCCTTCCCA TTTA TGGCAAGGGCG TTTTGCGTTATCTTT TERM 2883 2655554 - 2655530 - T 88 -9.9 -4.15788 | opp_overlap 2655533, overlap 2655532 2655533 AACGTTGGCAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCATATGCGCCTAT TERM 2884 2655552 - 2655532 - T 100 -12.5 -3.6761 | opp_overlap 2655533, overlap 2655530 2655533 CGTTGGCAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 2885 2655551 - 2655533 - T 100 -16 -2.80244 | opp_overlap 2655533, overlap 2655532 2655530 GTTGGCAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 2886 2655533 - 2655551 + T 100 -16 -4.8048 | opp_overlap 2655533 2655532 2655530 GTTGGCAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC YPDSF_2326 2656090 - 2655632 - | transposase for the IS1541 insertion element TERM 2887 2656221 - 2656203 - R 100 -16 -3.07307 | opp_overlap 2656203 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAT TERM 2888 2656203 - 2656221 + r 100 -16 -4.37092 | opp_overlap 2656203 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAT TERM 2889 2656269 - 2656242 - R 100 -10.7 -5.18726 | gap 1, opp_overlap 2656242 TGGGCACAATAAAAA GGGCGATACGCT GTTTT AGC-TATCGCCC TTTATTTTACTGGAT TERM 2890 2656242 - 2656269 + r 100 -11.4 -4.7261 | gap 1, opp_overlap 2656242 TGGGCACAATAAAAA GGGCGATACGCTG TTT TAGC-TATCGCCC TTTATTTTACTGGAT clpA 2658659 - 2656383 - | ATP-dependent Clp protease ATP-binding subunit TERM 2891 2658678 - 2658690 + r 71 -4.8 -4.58395 | CACCTCCCAATAATT GCCT TAATC AGGC TTTTTCCAGCGTACA clpS 2659005 - 2658685 - | ATP-dependent Clp protease adaptor protein ClpS TERM 2892 2658927 - 2658950 + gr 76 -6 -4.73432 | gap 1, opp_overlap 2658927 2658932 GTATCACTTTATACA TCGAAGGCGGT TGA AGCGCCT-CGA TTTGTTTATCTTTGA YPDSF_2329 2659180 - 2658974 - | hypothetical protein TERM 2893 2659399 - 2659413 + G 82 -8.6 -4.44046 | opp_overlap 2659398 2659399 AAATGGTTCAACAAC GCCAAA GGT TTTGGC TTTATTTGCCCTGAG YPDSF_2330 2659366 - 2659629 + | cold shock-like protein TERM 2894 2659732 - 2659765 + T 100 -11.2 -4.63007 | opp_overlap 2659738, overlap 2659738 TACCTGTACTTTGAT TCAAAATGCCAGTC AATGAC GACTGGCATTTTTA TTTTATCTACTTCTA TERM 2895 2659738 - 2659759 + T 100 -10.2 -5.58522 | opp_overlap 2659738, overlap 2659732 TACTTTGATTCAAAA TGCCAGTC AATGAC GACTGGCA TTTTTATTTTATCTA TERM 2896 2659759 - 2659738 - T 93 -10.9 -4.18494 | opp_overlap 2659732 2659738 TACTTTGATTCAAAA TGCCAGTCA ATGA CGACTGGCA TTTTTATTTTATCTA YPDSF_2331 2661859 - 2659910 - | macrolide transporter ATP-binding /permease protein YPDSF_2332 2662971 - 2661859 - | macrolide transporter subunit MacA YPDSF_2333 2663004 - 2663180 + | hypothetical protein YPDSF_2334 2663208 - 2664155 + | virulence factor YPDSF_2335 2665959 - 2664292 - | hypothetical protein TERM 2897 2664547 - 2664530 - G 78 -2.6 -5.24129 | GCGCGGTATAAAAAA TGCTCC ATATCG GGTGCA GGCAAAATTGTTAGG TERM 2898 2665110 - 2665122 + g 83 -9.1 -4.42238 | GGGCATGAGGATCGA GGCTC AGT GAGCC TTTTGCTTGCAATAA TERM 2899 2665634 - 2665648 + g 76 -5.7 -4.72201 | opp_overlap 2665634 ACTCGATAGTAGATA CGATG TAACC CATCG TTATTTTTTATCCAC YPDSF_2336 2666312 - 2667208 + | hypothetical protein TERM 2900 2667240 - 2667252 + F 76 -6.9 -4.44548 | overlap 2667234 AGTCGCCCCCCCCCC GCCCT CTG GGGGC TTTTCCTTCCCTATA TERM 2901 2667605 - 2667617 + G 70 -3.3 -4.83615 | overlap 2667601 CCAAATTGACAGCTT TGCCC CCA GAGCA TTTTTCTCAACGCTG YPDSF_2337 2667411 - 2669063 + | hydroxylamine reductase TERM 2902 2669078 - 2669112 + F 76 -10 -3.39288 | overlap 2669076 2669108 AGTTAATTATACCTT GCCTGGTCAATCGC CTTTCTC GCCGTTGACCGGGC TATTATTGCACGCTG YPDSF_2338 2669177 - 2670199 + | HCP oxidoreductase, NADH-dependent TERM 2903 2671872 - 2671887 + G 70 -9 -3.58343 | opp_overlap 2671883 CTCTGAGTTAAATGC GGCACT GGAA AGTGCC TTTGCACATCCTGGC YPDSF_2339 2670343 - 2672064 + | pyruvate dehydrogenase YPDSF_2340 2672377 - 2673432 + | L-threonine aldolase YPDSF_2341 2673429 - 2674919 + | membrane protein TERM 2904 2675212 - 2675202 - g 71 -6.8 -4.2349 | TCCTCACAGGCAAAA GCCA TGC TGGC GGATGTCGATACGCT YPDSF_2342 2675019 - 2676026 + | hypothetical protein YPDSF_2343 2676123 - 2676698 + | putative lipoprotein YPDSF_2344 2676835 - 2676725 - | hypothetical protein YPDSF_2345 2676868 - 2677428 + | chorismate mutase TERM 2905 2677459 - 2677487 + F 78 -8.8 -3.89354 | GGCCACACATCTTTC GTACCGGGTTCC TTCCC GTGGCCCGGTAC TTATTGATTTACAAA artP 2677723 - 2678451 + | arginine transporter ATP-binding subunit YPDSF_2347 2678472 - 2679203 + | arginine-binding periplasmic protein 1 precursor TERM 2906 2679234 - 2679269 + G 82 -10.4 -3.89346 | gap 1, opp_overlap 2679240, overlap 2679235 ATGAATTTCAACCTT TAGCAAGTGCCGCCGGT ATG ACCGTCGGC-CTTGCCG TTTGTGCACTGGCAC TERM 2907 2679235 - 2679268 + G 76 -11.7 -2.93393 | gap 1, opp_overlap 2679240, overlap 2679234 TGAATTTCAACCTTT AGCAAGTGCCGCCGGT ATG ACCGTCGGC-CTTGCC GTTTGTGCACTGGCA YPDSF_2348 2679215 - 2679931 + | arginine transporter permease subunit ArtQ artM 2679931 - 2680599 + | arginine transporter permease subunit ArtM TERM 2908 2680626 - 2680660 + G 86 -12.2 -3.90112 | opp_overlap 2680625 2680624 CCTTATGCGACAACG CCGGATCATCAACCAG AAA TTGCGTGATGATCCGG TTTCCTTAACGCCCC YPDSF_2350 2680615 - 2680764 + | hypothetical protein YPDSF_2351 2681634 - 2680789 - | membrane protein YPDSF_2352 2683031 - 2681631 - | hypothetical protein YPDSF_2353 2683791 - 2682994 - | hypothetical protein TERM 2909 2683037 - 2683050 + gr 70 -8.1 -3.73775 | opp_overlap 2683035 2683036 ATAAGGTCATAAAGC CCGGT GGTC ACCGG TTTACTGGCGGTGCG YPDSF_2354 2684564 - 2683779 - | transport ATP-binding protein TERM 2910 2683842 - 2683852 + g 70 -8.2 -3.70919 | CAATAAGTAGCGATA GCCC AAA GGGC TTGTTCCACTTTCGA YPDSF_2355 2685463 - 2684561 - | FecCD transport family protein YPDSF_2356 2686708 - 2685617 - | periplasmic binding protein TERM 2911 2685771 - 2685760 - G 70 -3 -4.89393 | CAAACTGCACAAAAA TGTA GTCG TACA ACGTGCGGACGCCGC TERM 2912 2685973 - 2685952 - G 72 -3.7 -4.82901 | CGCCCGCCAGAAAAA TTACCTCGG GTTT CTGAGATAA CACATACTCTGCGCG TERM 2913 2687091 - 2687056 - R 100 -11.8 -5.35459 | opp_overlap 2687052 ACAGATGATAAAAAA GCCCACTACACCACGA ATCT CCATGGGGAAGTGGGC TTCAGATTTATTGAT YPDSF_2357 2688046 - 2687120 - | SPFH domain-containing protein TERM 2914 2688415 - 2688399 - R 71 -6.7 -4.21974 | opp_overlap 2688381, overlap 2688382 2688381 TTATCATTTAACAAA TGATAAT GAA ATTATCA CCATGCTAATACCAG YPDSF_2358 2688617 - 2688387 - | hypothetical protein YPDSF_2359 2688865 - 2689596 + | hypothetical protein rumB 2690853 - 2689723 - | 23S rRNA methyluridine methyltransferase TERM 2915 2690268 - 2690280 + g 73 -9.1 -3.67597 | opp_overlap 2690263, overlap 2690265 CCTGATTAAACCGCT CAGGC AGG GCCTG TTGTTCGGTCAGCGG TERM 2916 2690834 - 2690819 - G 82 -10.4 -3.83226 | opp_overlap 2690819 AACCACTGACAAGAA CGGCAG CGAC CTGCCG TATACTGTGCGCAAT YPDSF_2361 2691401 - 2690937 - | hypothetical protein TERM 2917 2691492 - 2691469 - R 100 -15.4 -3.30124 | overlap 2691472 TGTTATCTCTCACAA TAACGCCGCT CTAA AGCGGCGTTA AAGGAGACGAAAGAC TERM 2918 2691489 - 2691472 - R 100 -12.7 -3.7941 | overlap 2691469 TATCTCTCACAATAA CGCCGCT CTAA AGCGGCG TTAAAGGAGACGAAA YPDSF_2362 2692371 - 2691526 - | putrescine ABC transporter membrane protein YPDSF_2363 2693333 - 2692368 - | putrescine ABC transporter membrane protein potG 2694491 - 2693358 - | putrescine transporter ATP-binding subunit YPDSF_2365 2694497 - 2694616 + | hypothetical protein YPDSF_2366 2695771 - 2694662 - | putrescine ABC transporter periplasmic substrate-binding protein TERM 2919 2695150 - 2695140 - G 71 -6.8 -4.25458 | opp_overlap 2695145 AACTTCAGCAATAAA TCCG TCG CGGA GCCCGTGTAATCGGC TERM 2920 2695429 - 2695442 + g 70 -2.3 -4.98857 | opp_overlap 2695430, overlap 2695430 TGACCAGCGCCAGTA ACTCG GGGT CGAGA TTTTTCTCATTCGGT TERM 2921 2696230 - 2696194 - R 71 -5 -4.74013 | gap 1, opp_overlap 2696196 2696197 2696199, overlap 2696196 2696197 CGTAAATAGAGAAAA TAG-CCGCGTGCCGCTG ATAT CTGCGGCACACTGTCTT TATTCGGACACGTTC TERM 2922 2696227 - 2696196 - R 74 -7.8 -3.97364 | opp_overlap 2696196 2696197 2696199, overlap 2696194 2696197 TAAATAGAGAAAATA GCCGCGTGCCGCTG ATAT CTGCGGCACACTGT CTTTATTCGGACACG TERM 2923 2696197 - 2696226 + r 75 -9.1 -3.6761 | opp_overlap 2696197 2696196 2696194, overlap 2696196 2696199 AAATAGAGAAAATAG CCGCGTGCCGCTG ATAT CTGCGGCACACTG TCTTTATTCGGACAC TERM 2924 2696226 - 2696197 - R 83 -11.3 -2.96792 | opp_overlap 2696196 2696197 2696199, overlap 2696196 2696194 AAATAGAGAAAATAG CCGCGTGCCGCTG ATAT CTGCGGCACACTG TCTTTATTCGGACAC TERM 2925 2696199 - 2696224 + r 80 -10.3 -3.41738 | opp_overlap 2696197 2696196 2696194, overlap 2696197 2696196 ATAGAGAAAATAGCC GCGTGCCGCTG ATAT CTGCGGCACAC TGTCTTTATTCGGAC YPDSF_2367 2696778 - 2696230 - | hypothetical protein TERM 2926 2696871 - 2696897 + r 76 -9.5 -3.41013 | TCCCGACTAATTTGA TATCTGGGCCG TTCCT CGGCTTAGATA TTCTCAATGTGCTTA YPDSF_2368 2697234 - 2696920 - | hypothetical protein TERM 2927 2697861 - 2697848 - g 76 -4.5 -5.03314 | overlap 2697859 2697860 CTGATCTGGAAAAAA CGGTC GGTA AACCG GTTGAAACCGTGCCA grxA 2697697 - 2697960 + | glutaredoxin 1 TERM 2928 2698017 - 2698001 - f 95 -12.3 -3.33492 | opp_overlap 2698001 GCATTTATCCGATAA GGGTGTC CAA GACACCC TTTCTTTATTGCTGG TERM 2929 2698001 - 2698017 + F 100 -12.3 -4.70887 | opp_overlap 2698001 GCATTTATCCGATAA GGGTGTC CAA GACACCC TTTCTTTATTGCTGG TERM 2930 2698875 - 2698892 + G 74 -7.7 -4.18197 | CCCTGACTTATCTTA TCGGGCT GGTT AGCCTGA TTTTAGGTGCGCGCT YPDSF_2370 2698370 - 2700058 + | hypothetical protein TERM 2931 2701100 - 2701088 - g 75 -9.1 -3.90744 | opp_overlap 2701088 GTTTCGGTCAAATAA TGCGC GGG GCGCA TTTTCTTACTCATAA TERM 2932 2701088 - 2701100 + G 90 -9.1 -4.73613 | opp_overlap 2701088 GTTTCGGTCAAATAA TGCGC GGG GCGCA TTTTCTTACTCATAA YPDSF_2371 2700436 - 2701206 + | hypothetical protein YPDSF_2372 2701236 - 2701811 + | undecaprenyl pyrophosphate phosphatase TERM 2933 2701837 - 2701861 + F 100 -15.1 -2.91264 | GTATTCGCTTCACAC TTGCCGGTTAG TCT CTGACCGGCAA TCTCTCCATGCGCCC YPDSF_2373 2702069 - 2702740 + | deoxyribose-phosphate aldolase TERM 2934 2702881 - 2702908 + F 100 -11.4 -4.36554 | ATTTTGTCAGTAGTC TAAGCCCGGT CCACAATT ACCGGGCTTA TTTATTATCGTACTG YPDSF_2374 2702970 - 2703734 + | DNA-binding transcriptional repressor DeoR TERM 2935 2703894 - 2703907 + F 70 -3.9 -4.83615 | opp_overlap 2703894 CGCTATGTTGGCAAA TAATC CATA GATTA TTTTTATACAGAATC TERM 2936 2705604 - 2705625 + G 78 -9.5 -3.82486 | opp_overlap 2705606 GAGCTTTGCCCACAT CATGATGGT TATC ACCGTCATG TTCTTCGTCTTCAGT TERM 2937 2705951 - 2705937 - g 74 -10 -3.59979 | TGTCGCGACCTTAAA CCCAAG TAT CTTGGG GATGATCGAAACATT YPDSF_2375 2704834 - 2706135 + | serine transporter TERM 2938 2706172 - 2706204 + T 90 -5.6 -5.54403 | gap 1, overlap 2706174 CGTTTGATTAACCGC T-CCAGGCTGGCC ACTTCCAC GGCCAGCCTGTTA TTTTTCTTCTTTTTT TERM 2939 2706174 - 2706201 + T 100 -14.2 -4.74161 | overlap 2706172 TTTGATTAACCGCTC CAGGCTGGCC ACTTCCAC GGCCAGCCTG TTATTTTTCTTCTTT TERM 2940 2706417 - 2706448 + T 100 -10.3 -4.28791 | opp_overlap 2706423, overlap 2706423 CCCTGAGAAACATCC TAAAAAGCGCGAT AGTCAC ATCGCGCTTTCTA TTTATGTTATGGATT TERM 2941 2706423 - 2706442 + T 95 -9.3 -4.45693 | opp_overlap 2706423, overlap 2706417 GAAACATCCTAAAAA GCGCGAT AGTCAC ATCGCGC TTTCTATTTATGTTA TERM 2942 2706442 - 2706423 - T 100 -10 -4.6856 | opp_overlap 2706423 2706417 GAAACATCCTAAAAA GCGCGATA GTCA CATCGCGC TTTCTATTTATGTTA YPDSF_2376 2707781 - 2706576 - | D-alanyl-D-alanine carboxypeptidase TERM 2943 2707038 - 2707012 - G 84 -10.9 -4.08887 | opp_overlap 2707024 ACCACGGAAATCAAA CGCATCGGC CCATCTGTC GCCGATGCG ACCAAATTATACCCC YPDSF_2377 2708787 - 2708116 - | ABC transport integral membrane subunit TERM 2944 2708585 - 2708573 - G 71 -5.5 -4.55625 | AGTAACACCACAAAA GGCAT TGA ACGCC CCACATTGACCAGTG YPDSF_2378 2709770 - 2708784 - | ABC transport ATP-binding subunit TERM 2945 2708867 - 2708842 - G 70 -9.1 -3.54307 | gap 1 AACACTTCGGCTAAA TTCAACCCGCCC TCT GGACG-GTTGAA ATCAACGTGCAAGCG YPDSF_2379 2710591 - 2709767 - | hypothetical protein YPDSF_2380 2711886 - 2710819 - | iron/ascorbate oxidoreductase family protein TERM 2946 2710997 - 2710972 - G 75 -10.5 -3.494 | CAATGCGGCAGATAA TGGATACAGTG GCAC CACCGCATCCA AACGCGCACCTAAAA TERM 2947 2711464 - 2711495 + g 71 -7.2 -3.99324 | CCATTGGTTCGGGCC TTGCAGCCGTGTCC AACT GGGTGCGCCTGCGA TTTGTGGTAATGGGG TERM 2948 2712747 - 2712759 + G 75 -10.5 -3.37622 | CGCGAAACACTTTGC CGCCG ATA CGGCG TTATCAATCGGTGTT YPDSF_2381 2712373 - 2713023 + | hydrolase YPDSF_2382 2713177 - 2713797 + | glutathione S-transferase-family protein TERM 2949 2713892 - 2713842 - T 85 -9.3 -4.07885 | gap 1, overlap 2713843 CATTGCTGGTCAAAA TCCCGAATCACTTACTTATT-TTA AAGT CAACAACCAGTAAGTGATTCGGGT AAGTGCGCTCAGCTA TERM 2950 2713891 - 2713843 - T 95 -12.8 -3.04517 | gap 1, overlap 2713842 ATTGCTGGTCAAAAT CCCGAATCACTTACTTATT-TTA AAGT CAACAACCAGTAAGTGATTCGGG TAAGTGCGCTCAGCT YPDSF_2383 2716064 - 2714067 - | putative outer membrane receptor TERM 2951 2714722 - 2714734 + g 71 -10.5 -3.04398 | opp_overlap 2714720 2714721, overlap 2714721 TTACCCAGAATAAGT GCGGG AAG CCCGC CTTTTCCCCCACCAG TERM 2952 2715198 - 2715181 - G 71 -5.7 -4.3534 | opp_overlap 2715193, overlap 2715193 GTTGAATTACCAAAA TCATAAT AACC ATTATGA GTAACCGCATAATTA YPDSF_2384 2717112 - 2716324 - | siderophore ABC transporter, ATP-binding subunit YPDSF_2385 2718191 - 2717109 - | FecCD-family membrane transport protein TERM 2953 2717292 - 2717278 - G 78 -6.4 -4.8622 | overlap 2717279 GCTGGTAAGTAAAAA CGGTGA TCT TCACCA AAAATCATGCGTGCG YPDSF_2386 2719511 - 2718366 - | periplasmic substrate-binding transport protein TERM 2954 2719575 - 2719561 - R 70 -5.8 -4.26832 | overlap 2719569 TAACAATAAAGCAAA TGATAA TAC TTATCA ATAAGATTGCCATAA TERM 2955 2719717 - 2719678 - R 100 -17.4 -3.51924 | gap 1, opp_overlap 2719668 2719680 2719688 TGTTCACGGATAGAA TG-CGCCAATACCAGCACA TTT CGTACTGGTATTGGCGTCA GTTACCGCTAATTTA TERM 2956 2719680 - 2719714 + r 100 -17.3 -2.53382 | opp_overlap 2719678, overlap 2719668 2719688 TTCACGGATAGAATG CGCCAATACCAGCAC ATTTC GTACTGGTATTGGCG TCAGTTACCGCTAAT TERM 2957 2719777 - 2719745 - R 100 -11.3 -4.29738 | opp_overlap 2719752, overlap 2719749 2719751 2719752 TTATAGGCACTAAAA TAAATATCCTCCGGC ATA GCCGGAGGTTTTTCA TATGCGCCTATAAGG TERM 2958 2719773 - 2719749 - R 100 -9.9 -4.7261 | opp_overlap 2719752, overlap 2719745 2719751 2719752 AGGCACTAAAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCATATGCGCCTAT TERM 2959 2719771 - 2719751 - R 100 -12.5 -3.97149 | opp_overlap 2719752, overlap 2719749 2719745 2719752 GCACTAAAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 2960 2719752 - 2719770 + r 100 -16 -4.8048 | opp_overlap 2719751 2719749 2719745 2719752 CACTAAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 2961 2719770 - 2719752 - R 100 -16 -2.97205 | opp_overlap 2719752, overlap 2719751 2719749 2719745 CACTAAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC YPDSF_2387 2720309 - 2719851 - | transposase for the IS1541 insertion element TERM 2962 2720440 - 2720422 - R 100 -16 -3.07307 | opp_overlap 2720422 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAG TERM 2963 2720422 - 2720440 + r 100 -16 -4.36914 | opp_overlap 2720422 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAG TERM 2964 2720458 - 2720477 + r 93 -12.2 -3.73072 | opp_overlap 2720458 TTCTGGGCACAAGAA GGGCGATA GCGT TATCGCCC TTTCATCCGCACGTT TERM 2965 2720477 - 2720458 - R 100 -12.2 -3.78934 | opp_overlap 2720458 TTCTGGGCACAAGAA GGGCGATA GCGT TATCGCCC TTTCATCCGCACGTT YPDSF_2388 2722019 - 2720508 - | lysine transporter TERM 2966 2721104 - 2721088 - G 73 -8.7 -3.79419 | opp_overlap 2721088 2721087 CCCGCCGATAAAACA GCGGTCA AAA TAACCGC ATTCATCACTGCCGC YPDSF_2389 2723149 - 2722277 - | putative DNA-binding transcriptional regulator TERM 2967 2722423 - 2722390 - G 84 -13.3 -3.44334 | gap 1, opp_overlap 2722400, overlap 2722404 GTAAAGGAATATTAA GCTCGACCAACTCACC GCT GGCGAGTTGATC-AGC AATCACTCGCCGCGA YPDSF_2390 2723807 - 2724895 + | hypothetical protein TERM 2968 2724959 - 2724982 + F 100 -13.2 -3.75332 | overlap 2724962 CTAAAACAAACCGTT TAAGGGCCGT ATCC GCGGCCCTTA TTTCCCTTCACCGCT TERM 2969 2724962 - 2724979 + F 89 -10.5 -4.0098 | overlap 2724959 AAACAAACCGTTTAA GGGCCGT ATCC GCGGCCC TTATTTCCCTTCACC TERM 2970 2725583 - 2725573 - g 86 -8.2 -4.67608 | opp_overlap 2725572 2725573 GAGTGGAAGATAAAA GCCG CGT CGGC GTCTGTATTGATACC YPDSF_2391 2725059 - 2725916 + | endonuclease IV TERM 2971 2725950 - 2725926 - T 100 -11.4 -4.4715 | overlap 2725928 TTGTAACGTAGAAAA TGCCCGCCAG TAAAC CTGGCGGGAA TTGAACCTAACGGGA TERM 2972 2725948 - 2725928 - T 93 -14 -2.56203 | overlap 2725926 GTAACGTAGAAAATG CCCGCCAG TAAAC CTGGCGGG AATTGAACCTAACGG YPDSF_2392 2728458 - 2725987 - | outer membrane usher protein PsaC precursor TERM 2973 2727770 - 2727758 - G 73 -3.3 -5.00884 | overlap 2727759 ATGCTGTCGAAAAAA TCACC TGG GGTGT AACTCTCCCCTAAGG YPDSF_2393 2729363 - 2728542 - | chaperone protein PsaB precursor TERM 2974 2728660 - 2728648 - G 72 -4.1 -4.90079 | ACCGGAATAATAAAA TCCCT AGA AGAGA ATGGCGGAACATAGC TERM 2975 2728662 - 2728680 + g 88 -3.8 -5.68438 | ATCCCTAGAAGAGAA TGGCGG AACATAG CTGCCA TTTTTTATTTCATCC TERM 2976 2729424 - 2729390 - R 95 -14 -2.84192 | opp_overlap 2729382 CACATTATCATGATA TTTTATTGTGAATTTT AAA AAAACTCACAATAAAA CATCAATAACAAAAA TERM 2977 2729481 - 2729440 - R 89 -6.7 -5.31855 | opp_overlap 2729443 2729444 2729446, overlap 2729442 2729444 CATCAATAACAAAAA CATACATAGAACATGACAG CAAG CCATCATGTTCTATGATTA CTCGTTATTTAAAAT TERM 2978 2729478 - 2729442 - R 86 -9 -4.27297 | gap 1, opp_overlap 2729443 2729444 2729446, overlap 2729440 2729444 TCAATAACAAAAACA TACATAGAACATGACAG CAAG CCATCATGTTCTATG-A TTACTCGTTATTTAA TERM 2979 2729444 - 2729477 + r 71 -9.7 -2.60492 | opp_overlap 2729442 2729440 2729444, overlap 2729443 2729446 AATAACAAAAACATA CATAGAACATGACAG CAAG CCATCATGTTCTATG ATTACTCGTTATTTA TERM 2980 2729477 - 2729444 - R 100 -14.1 -3.70836 | opp_overlap 2729444 2729443 2729446, overlap 2729442 2729440 AATAACAAAAACATA CATAGAACATGACAG CAAG CCATCATGTTCTATG ATTACTCGTTATTTA YPDSF_2394 2729966 - 2729490 - | pH 6 antigen precursor (antigen 4) (adhesin) YPDSF_2395 2731011 - 2730511 - | hypothetical protein TERM 2981 2730609 - 2730637 + g 80 -4.5 -5.08831 | opp_overlap 2730608, overlap 2730611 2730621 TGACATCAATAAAGC CTCTGTCACCATT AAA AAAGGTGACAACG TTATTTTTTTTATTA YPDSF_2396 2731640 - 2730996 - | regulatory protein TERM 2982 2731209 - 2731188 - G 82 -6.7 -4.77036 | TCCTACCATGAAAAA TATGATGAT GATG ACCATCATA ATAGCGATAAAAAAG TERM 2983 2731779 - 2731802 + r 71 -8.4 -3.53224 | opp_overlap 2731777 2731788, overlap 2731777 GCACAAGATTAAGTC TTATTAAGAT TATT ATCTTAATAA TTTAACAAAAAAATA TERM 2984 2731906 - 2731881 - R 100 -13.4 -5.30686 | opp_overlap 2731881 AACACCCATAAAAAA TGCCAGTCAG AATTAA CTGACTGGCA TTTCAGACTGCTGAC TERM 2985 2731881 - 2731906 + r 100 -13.4 -3.58343 | opp_overlap 2731881 AACACCCATAAAAAA TGCCAGTCAG AATTAA CTGACTGGCA TTTCAGACTGCTGAC YPDSF_2397 2733665 - 2731965 - | fructose-specific PTS system IIBC component fruK 2734618 - 2733680 - | 1-phosphofructokinase TERM 2986 2734501 - 2734521 + g 79 -6.8 -4.59853 | CGTTGATCCCTTTAC CCGCCG CATGCAGAC CGGCGG TTTTTACCAGATTGA YPDSF_2399 2735748 - 2734615 - | bifunctional fructose-specific PTS IIA/HPr protein YPDSF_2400 2736010 - 2736465 + | Mut family protein YPDSF_2401 2737576 - 2736578 - | ABC transport integral membrane subunit TERM 2987 2736865 - 2736851 - G 78 -3.5 -5.08601 | gap 1 CGATGCCAACAAAAA GCCAGC AAGT GC-GGC AAGGAACCCTGAAAT YPDSF_2402 2739186 - 2737612 - | ABC transport ATP-binding subunit TERM 2988 2738119 - 2738132 + g 74 -8.1 -4.07687 | opp_overlap 2738119 AATGCCAATATTGAA GGCCA TGCG TGGCC TTTTCGGCAGAGCCT TERM 2989 2739031 - 2739052 + g 70 -2.9 -4.8083 | gap 1, opp_overlap 2739034, overlap 2739031 2739033 2739034 GGTCGTCACGCCGCA C-AAGGCCTG CAC CGGGCCATAG TTTTTGCTGATATTC YPDSF_2403 2740383 - 2739295 - | periplasmic carbohydrate-binding transport protein YPDSF_2404 2741209 - 2740499 - | ribose 5-phosphate isomerase YPDSF_2405 2742782 - 2741229 - | carbohydrate kinase TERM 2990 2742257 - 2742242 - G 71 -6.8 -4.24204 | gap 1, overlap 2742243 CACGTACATCGAAAA GCC-CGG TCC CCGAGGC ATCCGAAACTTCAGT YPDSF_2406 2744282 - 2742786 - | aldehyde dehydrogenase TERM 2991 2744090 - 2744080 - G 79 -8.2 -4.2828 | overlap 2744081 GCCCAGGCAGGAAAA GCGC GAC GCGC CGCAGCAACCGCCTC YPDSF_2407 2744633 - 2745775 + | hypothetical protein TERM 2992 2746697 - 2746729 + G 70 -11.1 -2.52464 | opp_overlap 2746689 CTGAAGAGGCCCTAC GGGGACTGCGCGGTG AGC CACTGCGCTGCCCAC TGACTTAAGGAGAAG YPDSF_2408 2745787 - 2746737 + | D-isomer specific 2-hydroxyacid dehydrogenase family protein TERM 2993 2746903 - 2746925 + G 70 -11.3 -2.62613 | overlap 2746902 2746900 AGGGCTGGCGGCAAC CGGTGCGGA AGTGA TCTGCACCG ATATTTCACGTGAAC YPDSF_2409 2746748 - 2747563 + | short chain oxidoreductase YPDSF_2410 2747886 - 2747632 - | hypothetical protein TERM 2994 2748247 - 2748228 - H 76 -7.8 -4.22375 | opp_overlap 2748232 ACTTAATATAAAGAA GTTACCCG CAGC CGGGTATC TCAGGAGCAATAGAT YPDSF_2411 2748261 - 2749505 + | tryptophan-specific transport protein YPDSF_2412 2749609 - 2750181 + | elongation factor P TERM 2995 2750265 - 2750295 + T 100 -14 -3.69482 | opp_overlap 2750274, overlap 2750266 CTATTGGGTCTCTCT ACGTTAAGAGCCGG AAA CCGGCCCTTAACGG TTATCTCTTCACTGA TERM 2996 2750266 - 2750294 + T 100 -17.5 -2.81207 | opp_overlap 2750274, overlap 2750265 TATTGGGTCTCTCTA CGTTAAGAGCCGG AAA CCGGCCCTTAACG GTTATCTCTTCACTG TERM 2997 2750286 - 2750274 - T 76 -10.5 -3.05844 | opp_overlap 2750266 2750265 CTCTCTACGTTAAGA GCCGG AAA CCGGC CCTTAACGGTTATCT YPDSF_2413 2751514 - 2750321 - | mannonate dehydratase TERM 2998 2750574 - 2750586 + g 85 -7.7 -4.83759 | CCTTGCAAATGCCCC CCTTC ATG GAAGG TTTTTGGATTTCCTT TERM 2999 2751570 - 2751552 - H 71 -3.2 -5.00467 | opp_overlap 2751564, overlap 2751544 GCAACAATAATAAAA TTAACC CGCTAAC GGTTAA AGCCGCCTTTTTCTG TERM 3000 2751852 - 2751864 + H 75 -3.4 -5.23292 | opp_overlap 2751852 CGAATATTATCAATA TTGG ACTTA CCAA TTTTATTTTCTGTCA TERM 3001 2752868 - 2752885 + G 71 -6.9 -4.2123 | GTCGCAGACTCTTGT GGGATCG CCTG CGAACCC TTTATTCAGTGGGTC YPDSF_2414 2752118 - 2753590 + | D-mannonate oxidoreductase TERM 3002 2753599 - 2753633 + T 89 -11.6 -3.4314 | opp_overlap 2753597 2753600, overlap 2753597 2753600 GGCTTAAGACACACG ACGATGAGCTGAAT CAAGGCT ATTCAGCTCATCGG TATTGTTGGCGTTTA TERM 3003 2753600 - 2753632 + T 100 -15.1 -2.65161 | opp_overlap 2753597 2753600, overlap 2753599 2753597 GCTTAAGACACACGA CGATGAGCTGAAT CAAGGCT ATTCAGCTCATCG GTATTGTTGGCGTTT TERM 3004 2753632 - 2753600 - T 100 -15.1 -2.75975 | opp_overlap 2753600 2753599 2753597, overlap 2753597 GCTTAAGACACACGA CGATGAGCTGAAT CAAGGCT ATTCAGCTCATCG GTATTGTTGGCGTTT YPDSF_2415 2754414 - 2753734 - | transcriptional regulatory protein YPDSF_2416 2754520 - 2754386 - | transcriptional regulatory protein TERM 3005 2754606 - 2754578 - H 100 -15.5 -3.89524 | ACTTCAGGTGATAAA TCACGGTTTATCA CGT CGATAAACCGTGA TGCCCAAACATGTTG TERM 3006 2755802 - 2755783 - g 70 -4.9 -4.68705 | overlap 2755772 2755769 ACAATGGCAACAAAA GCAGCCA TTATCG CGGCCGC TGTATCATAGCGAAT YPDSF_2417 2755271 - 2756254 + | cobalamin synthesis protein YPDSF_2418 2756313 - 2757014 + | hypothetical protein TERM 3007 2757626 - 2757574 - g 75 -9.1 -3.82865 | opp_overlap 2757572 TAAATAATACGCAAA CTGAGATGCGTGCAGTTAATGACAA AGA TGGGCTTTTACTGCAAGCCTCTCAG GATGAATTCGAAGCG TERM 3008 2757844 - 2757834 - g 71 -6.8 -4.1552 | opp_overlap 2757834 GATCTCGGCAAGAAA GTCC AGC GGAC TAAATTACGTCCAGG YPDSF_2419 2757456 - 2758040 + | putative outer membrane lipoprotein TERM 3009 2758103 - 2758087 - f 70 -8 -3.65084 | opp_overlap 2758087 AACCAAACGTTGAAA CGCTGT TTATG ACAGCG TTTTTTATTGGCTCA TERM 3010 2758087 - 2758103 + F 100 -8.7 -5.4833 | opp_overlap 2758087 AACCAAACGTTGAAA CGCTGTT TAT GACAGCG TTTTTTATTGGCTCA YPDSF_2420 2758736 - 2760208 + | hypothetical protein YPDSF_2421 2760290 - 2762098 + | substrate-binding transport protein TERM 3011 2762604 - 2762585 - g 100 -10.7 -5.60993 | opp_overlap 2762584 CTGGGGATAAAAAAA GCGGTGC GCAATG GCACCGC CTTCGATACCTGGAG YPDSF_2422 2762108 - 2763208 + | ABC transporter integral membrane subunit YPDSF_2423 2763208 - 2764236 + | ABC transporter integral membrane subunit TERM 3012 2765171 - 2765151 - g 73 -6.1 -4.58663 | opp_overlap 2765170 ACTATGCGCTAAAAA GCCTCAGTT TTG ACCTGAAGC CCGGCGAAAGTCTGG YPDSF_2424 2764238 - 2765830 + | ABC transporter ATP-binding subunit TERM 3013 2765875 - 2765854 - T 82 -5.8 -4.9792 | TAGCCTAGACAAAAA TGCCCGCG ATAGCA CACGGACA AACAGCTAAAAAGTA YPDSF_2425 2766235 - 2765891 - | hypothetical protein TERM 3014 2766473 - 2766488 + r 95 -7.6 -5.00412 | CAGAAGCTGTAGATT TGGGAT TCAG ATCCCA TTTTTCGTTATATTT YPDSF_2426 2766807 - 2766649 - | hypothetical protein YPDSF_2427 2768419 - 2767220 - | bicyclomycin/multidrug efflux system YPDSF_2428 2769230 - 2768523 - | 16S rRNA pseudouridylate synthase A TERM 3015 2769806 - 2769816 + G 71 -6.8 -4.17048 | CGAGAAGCGGTCGAT GCCA CGG TGGC TTATTTTCGACGCCA TERM 3016 2770074 - 2770093 + G 73 -5.8 -4.59027 | gap 1, overlap 2770077 CGGTGGCCCGTAATC TGCCGCTAT TTG ATAGCG-CA TTTTCTCTGCTGATT YPDSF_2429 2769764 - 2771521 + | DEAD box helicase family protein YPDSF_2430 2771683 - 2771967 + | 50S ribosomal protein L25 TERM 3017 2772028 - 2772004 - T 100 -9.9 -4.42806 | opp_overlap 2772007, overlap 2772006 2772007 GGACGCCGAAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCATATGCGCCTAT TERM 3018 2772026 - 2772006 - T 100 -12.5 -3.81958 | opp_overlap 2772007, overlap 2772004 2772007 ACGCCGAAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 3019 2772025 - 2772007 - T 100 -16 -2.88452 | opp_overlap 2772007, overlap 2772006 2772004 CGCCGAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 3020 2772007 - 2772025 + T 100 -16 -4.8048 | opp_overlap 2772007 2772006 2772004 CGCCGAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC YPDSF_2431 2772564 - 2772106 - | transposase for the IS1541 insertion element TERM 3021 2772677 - 2772695 + r 100 -16 -4.37092 | opp_overlap 2772677 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAT TERM 3022 2772695 - 2772677 - R 100 -16 -3.07307 | opp_overlap 2772677 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAT TERM 3023 2772710 - 2772739 + r 100 -18.1 -3.07816 | opp_overlap 2772710 2772717, overlap 2772717 GTTTTCTGGGCACAA TAAAAAACGCCGC TGAT GCGGCGTTTTTTA TTGGCTAAATACGCA TERM 3024 2772739 - 2772710 - R 100 -18.1 -3.28712 | opp_overlap 2772710 2772717, overlap 2772717 GTTTTCTGGGCACAA TAAAAAACGCCGC TGAT GCGGCGTTTTTTA TTGGCTAAATACGCA TERM 3025 2772717 - 2772732 + r 100 -11.8 -5.4833 | opp_overlap 2772717 2772710, overlap 2772710 GGGCACAATAAAAAA CGCCGC TGAT GCGGCG TTTTTTATTGGCTAA TERM 3026 2772732 - 2772717 - R 100 -11.8 -5.55769 | opp_overlap 2772710 2772717, overlap 2772710 GGGCACAATAAAAAA CGCCGC TGAT GCGGCG TTTTTTATTGGCTAA YPDSF_2432 2773769 - 2772765 - | nucleoid-associated protein NdpA YPDSF_2433 2773947 - 2774174 + | hypothetical protein TERM 3027 2775098 - 2775112 + G 71 -5.6 -4.4572 | TTACAGTTCGGGTAA CCGGCA AGA TACCGG TTTATTTGGCCTGTT YPDSF_2434 2774202 - 2775998 + | membrane protein TERM 3028 2776187 - 2776220 + F 100 -13.3 -3.91144 | opp_overlap 2776185 2776195, overlap 2776190 2776195 GCCGACCAAATACCT CAACAAAACCAATCC ATTC GGGTTGGTTTTGTCG TTTGTGGAGTGTGGC TERM 3029 2776190 - 2776217 + F 100 -13.6 -3.02186 | opp_overlap 2776185 2776195, overlap 2776187 2776195 GACCAAATACCTCAA CAAAACCAATCC ATTC GGGTTGGTTTTG TCGTTTGTGGAGTGT TERM 3030 2776195 - 2776212 + F 86 -7.7 -4.64846 | opp_overlap 2776195 2776185, overlap 2776190 2776187 AATACCTCAACAAAA CCAATCC ATTC GGGTTGG TTTTGTCGTTTGTGG TERM 3031 2776212 - 2776195 - f 73 -5.5 -4.6759 | opp_overlap 2776190 2776187 2776195, overlap 2776185 AATACCTCAACAAAA CCAATCC ATTC GGGTTGG TTTTGTCGTTTGTGG TERM 3032 2776283 - 2776267 - f 72 -9.4 -3.17051 | overlap 2776265 TTGGGATGAGCAAGA GTGCCG GGATG CGGCAC AGCATAATTTCAATG TERM 3033 2776714 - 2776751 + F 87 -8.6 -4.5464 | overlap 2776715 TCACATGCGAGGTTT TTATGTTGGTTCAGTT AGTTCA ATCTGAACCAACATAC TTTTGCTTATATATA TERM 3034 2776715 - 2776750 + F 89 -12.1 -3.317 | overlap 2776714 CACATGCGAGGTTTT TATGTTGGTTCAGTT AGTTCA ATCTGAACCAACATA CTTTTGCTTATATAT YPDSF_2436 2776969 - 2778117 + | hypothetical protein YPDSF_2437 2778130 - 2778618 + | hypothetical protein YPDSF_2438 2778889 - 2778981 + | hypothetical protein TERM 3035 2779556 - 2779571 + T 72 -6.2 -4.34402 | opp_overlap 2779555 TTAAATTAAAAACTG GGATAA TAGG TTATCC TTTTGATATGAAAGA TERM 3036 2779760 - 2779739 - T 100 -12.3 -4.8143 | opp_overlap 2779738 2779737 GTAACAAGGTAAAAA CCGCTCACC AAAG GGTGAACGG CCTTCTTGAATTCAA YPDSF_2439 2781242 - 2779806 - | 6-phospho-beta-glucosidase TERM 3037 2779883 - 2779896 + g 74 -4.5 -4.84359 | AACGCGCCATTGTAC CGGTG CCAT CATCG TTTTTATCGACATAA YPDSF_2440 2782273 - 2781533 - | LacI-family regulatory protein TERM 3038 2782454 - 2782478 + r 75 -7.2 -4.33621 | gap 1, opp_overlap 2782457, overlap 2782455 2782457 TTCTTTGTAGATAGC TA-ACCGGGCG TAAT TGCCCGGTATA TTTATTAATTCACTG TERM 3039 2782455 - 2782476 + r 72 -7.9 -3.7642 | opp_overlap 2782457, overlap 2782454 2782457 TCTTTGTAGATAGCT AACCGGGCG TAAT TGCCCGGTA TATTTATTAATTCAC TERM 3040 2782474 - 2782457 - R 74 -9.8 -3.15999 | opp_overlap 2782455 2782454 2782457 TTTGTAGATAGCTAA CCGGGC GTAATT GCCCGG TATATTTATTAATTC TERM 3041 2782457 - 2782474 + r 80 -10.5 -3.45532 | opp_overlap 2782457, overlap 2782455 2782454 TTTGTAGATAGCTAA CCGGGCG TAAT TGCCCGG TATATTTATTAATTC YPDSF_2441 2783350 - 2782571 - | bacteriophage tail fiber protein TERM 3042 2783278 - 2783306 + g 70 -9.5 -3.25942 | opp_overlap 2783260 2783301, overlap 2783277 2783284 TGGGTGGAACGCCAC CGGCGACGTTGCC GTC GGTAAATTCGCCG TTACTGTCGGCGCGT YPDSF_2442 2783851 - 2783447 - | bacteriophage protein YPDSF_2443 2784051 - 2783791 - | bacteriophage protein YPDSF_2444 2785184 - 2784048 - | bacteriophage protein YPDSF_2445 2785643 - 2785188 - | bacteriophage protein GP46 YPDSF_2446 2786044 - 2785640 - | bacteriophage (baseplate assembly) protein TERM 3043 2786172 - 2786161 - R 72 -7.2 -4.07568 | overlap 2786162 TTGCTGTCGTCAAAA GCGG TCAC CCGC CCGATCCCCAGCAGC YPDSF_2447 2787308 - 2786253 - | bacteriophage tail protein YPDSF_2448 2788711 - 2787305 - | bacteriophage protein TERM 3044 2788766 - 2788753 - R 100 -9.5 -5.4387 | ACAGAAAGTAAAAAA CCCGC TGGA GCGGG TTCGAGGTTATTGAC TERM 3045 2788846 - 2788872 + r 72 -10.1 -2.88849 | gap 1, opp_overlap 2788835, overlap 2788841 2788847 ACATCCATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCTCTGCC TERM 3046 2788847 - 2788873 + r 84 -10.1 -3.82218 | gap 1, opp_overlap 2788835, overlap 2788841 2788846 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCTCTGCCT YPDSF_2449 2790471 - 2788978 - | bacteriophage coat protein YPDSF_2450 2790891 - 2790592 - | hypothetical protein TERM 3047 2790690 - 2790674 - GH 71 -6.6 -4.10657 | opp_overlap 2790655 TTATAGTCGGTAAAA GCCATT TTCTT AATGGC TTCGCGCGGCACCCC TERM 3048 2790808 - 2790826 + gH 100 -13.2 -3.38316 | AGGTTCGCTGAGTTC GACCACCT CAT AGGTGGTC TTGCTTGCGTCGTGA YPDSF_2452 2791261 - 2790893 - | hypothetical protein YPDSF_2451 2790845 - 2791249 + | hypothetical protein TERM 3049 2791234 - 2791244 + gT 73 -8.2 -3.64103 | TGACATACGCCGTAC CCGC CAG GCGG TTTGAAGTATCGCTC YPDSF_2453 2792791 - 2791283 - | bacteriophage tail sheath protein TERM 3050 2792460 - 2792446 - G 71 -7.8 -4.06633 | TATAAAGTGAAATAA CACCGG TCT CCGATG CCGCCGTATTGATGG YPDSF_2454 2792982 - 2792788 - | bacteriophage protein YPDSF_2455 2793604 - 2792987 - | ATP-binding protein YPDSF_2456 2793940 - 2793650 - | bacteriophage protein TERM 3051 2794028 - 2794012 - R 91 -3.5 -5.85737 | opp_overlap 2794011 2794012 2794019 ACAGCAATAAAAAAA CCCCGTC GAT GCTGGGG CTTCTTATTGTTTAC TERM 3052 2794180 - 2794167 - R 100 -8.1 -6.04953 | ATAGAAACAAAAAAA CCTGC CACA GCAGG AAGTTAATCGGTCTT TERM 3053 2794508 - 2794482 - R 100 -8.1 -5.30189 | gap 1, overlap 2794486 TATAAGATGAAAAAA GACA-GCCACAC CGAA GTGTGGCCTATC ACAGTTAGCTATACA TERM 3054 2794503 - 2794486 - R 90 -11.3 -3.7035 | overlap 2794482 AGATGAAAAAAGACA GCCACAC CGAA GTGTGGC CTATCACAGTTAGCT YPDSF_2457 2795331 - 2794537 - | hypothetical protein YPDSF_2458 2796119 - 2795307 - | transcriptional regulatory protein YPDSF_2459 2796853 - 2796122 - | putative aldolase YPDSF_2460 2798154 - 2796850 - | hypothetical protein TERM 3055 2798277 - 2798289 + r 74 -4.9 -4.8743 | opp_overlap 2798271, overlap 2798282 TCAATTTAACTTAAT GTTAT TAA ATAAC TTTATTTATTTTAGA YPDSF_2461 2798844 - 2798365 - | phage antitermination protein Q YPDSF_2462 2799118 - 2799840 + | prophage repressor protein YPDSF_2463 2800003 - 2799890 - | hypothetical protein TERM 3056 2799964 - 2799933 - G 70 -3 -4.77122 | overlap 2799907 2799906 2799951 2799955 TTATATAAAAAATAA CCGCCAGTAATT AACCAACA AATCACCTGCGG TAATTTATTTATGCC YPDSF_2464 2800046 - 2800288 + | stress response protein TERM 3057 2800365 - 2800375 + F 84 -2.6 -5.66989 | opp_overlap 2800365, overlap 2800370 TCAATGAGAAATTAA TTTT TTT AAAA TTTTTTTAATCTTTA YPDSF_2465 2800460 - 2801395 + | outer membrane protease YPDSF_2466 2801877 - 2803664 + | methyl-accepting chemotaxis protein YPDSF_2467 2804727 - 2803738 - | hypothetical protein TERM 3058 2804986 - 2804999 + H 77 -3.9 -5.16841 | opp_overlap 2804990, overlap 2804987 2804990 GCGTCTTCCTCTCAA TTGAT GTAT ATCAA TTTTTATTGATATAC TERM 3059 2804990 - 2805015 + H 76 -10.7 -2.71325 | opp_overlap 2804990, overlap 2804986 2804987 CTTCCTCTCAATTGA TGTATATCAAT TTTT ATTGATATACA TGGCTTTCTACGTCG TERM 3060 2805015 - 2804990 - H 76 -10.7 -2.52464 | opp_overlap 2804986 2804990 2804987 CTTCCTCTCAATTGA TGTATATCAAT TTTT ATTGATATACA TGGCTTTCTACGTCG TERM 3061 2806532 - 2806522 - g 79 -6.8 -4.7373 | overlap 2806523 TGAGCGTATTAAAAA TGGC GGT GCCA TGGCAGATATCCCCG YPDSF_2468 2805143 - 2806669 + | putative transport protein TERM 3062 2806688 - 2806722 + F 93 -13.6 -2.65388 | opp_overlap 2806674 2806694, overlap 2806694 ATTTCTGGTCGTGAC CACAAACCGCACCGGT CCC GCCAGTGCGGTTTTTG CTTCTCCCTTCCCTG TERM 3063 2806694 - 2806716 + F 100 -11.2 -4.93968 | opp_overlap 2806694, overlap 2806688 GGTCGTGACCACAAA CCGCACCGGT CCC GCCAGTGCGG TTTTTGCTTCTCCCT TERM 3064 2806716 - 2806694 - f 100 -12.7 -3.96148 | opp_overlap 2806694 2806688 GGTCGTGACCACAAA CCGCACCGG TCCCG CCAGTGCGG TTTTTGCTTCTCCCT TERM 3065 2807452 - 2807434 - g 73 -3.1 -5.00616 | gap 1 GCGGCCCGCAAAAAA GACC-GGT GTTT ACCTGGCC GACCAAAGATAATCG TERM 3066 2807968 - 2807956 - g 80 -4.7 -5.1101 | opp_overlap 2807956 2807956 GCATTATGCAAAAAA CCGGC GGT GGCGG TGGATTTATTACTTA YPDSF_2469 2806944 - 2808110 + | beta-lactamase/D-alanine carboxypeptidase TERM 3067 2808213 - 2808201 - T 77 -10.5 -3.22858 | overlap 2808193 2808199 GTAATGAGAGCAATA GCCCG CAC CGGGC ACATGCTGGATAAGC TERM 3068 2808265 - 2808289 + T 85 -7.2 -4.90266 | opp_overlap 2808265 AGAGAAAAGCAAAAA CCCGTTATCT TATTC AGATAACAGG TTTTTAATTGGTGCC TERM 3069 2808289 - 2808265 - T 100 -9.4 -5.15526 | opp_overlap 2808265 AGAGAAAAGCAAAAA CCCGTTATCT TATTC AGATAACAGG TTTTTAATTGGTGCC TERM 3070 2808822 - 2808797 - T 100 -15.5 -3.80733 | opp_overlap 2808801, overlap 2808801 CGTAGCTCACAATAA GAAACGCGGCC GAAT GACCGCGTTTC TCTCAGGACTCACAC TERM 3071 2808818 - 2808801 - T 100 -10.5 -4.51812 | opp_overlap 2808801, overlap 2808797 GCTCACAATAAGAAA CGCGGCC GAAT GACCGCG TTTCTCTCAGGACTC TERM 3072 2808801 - 2808818 + T 77 -8.3 -4.0371 | opp_overlap 2808801 2808797 GCTCACAATAAGAAA CGCGGCC GAAT GACCGCG TTTCTCTCAGGACTC YPDSF_2470 2809965 - 2808850 - | outer membrane porin protein C TERM 3073 2810348 - 2810362 + H 100 -11.4 -5.626 | TCGTTAATGTTACGA CCGGTC TCT GACCGG TTTTTTTCTCCGGTC TERM 3074 2813415 - 2813401 - g 84 -4.2 -5.31456 | overlap 2813402 TGAATCTACAAAAAA TTGCCA CTA TGGCAG AGCAGCACCACGGTG YPDSF_2473 2812245 - 2814197 + | hypothetical protein TERM 3075 2814658 - 2814646 - g 74 -7.7 -4.14193 | AGAAGATGATATAAA CCTCT ATG AGAGG CAACTAAAAACCAGT TERM 3076 2814885 - 2814897 + G 76 -2.7 -5.14563 | opp_overlap 2814882 AGATCGAAAATAGCA TCAGT CAG ATTGA TTTTTTCATCACCAG YPDSF_2474 2814365 - 2814937 + | two-component sensor protein like yojN YPDSF_2475 2814940 - 2815593 + | transcriptional regulator RcsB TERM 3077 2815617 - 2815643 + T 100 -15.2 -3.83844 | CCGCTCGACTCTCAA GCCCAGTTTTGC TCT GCAATACTGGGC TTATTAATTAATGAA YPDSF_2476 2818441 - 2815661 - | hybrid sensory kinase in two-component regulatory system with RcsB and YojN TERM 3078 2817819 - 2817807 - G 76 -3.3 -5.09762 | overlap 2817809 CGGGAAGAAATAAAA TCCTC TAA GCGGA CACTCTGCTCAAAGC TERM 3079 2818234 - 2818259 + g 81 -6.1 -4.96848 | opp_overlap 2818231 2818228, overlap 2818236 TATTCATAACCATGC CACTAGTGGCA TCAG TGTCACTGGCG TTTTTATCTAGCCGA TERM 3080 2818363 - 2818375 + g 100 -3.3 -5.95166 | TGTTGTTATATTCCT GACGA ATA TCGGC TTTTTTTTCGTTAAG TERM 3081 2818586 - 2818635 + r 81 -5.2 -5.14563 | opp_overlap 2818588, overlap 2818588 CGATAACCGATAAAA AAGCCAGCTCAGT-TGCTTAAC TGATGGGC GTTAAGCTCACTG-GCTGGCTG TTTTTTAATGACACG TERM 3082 2818588 - 2818633 + r 76 -7.8 -4.20707 | opp_overlap 2818588, overlap 2818586 ATAACCGATAAAAAA GCCAGCTCAGT-TGCTTAAC TGATGGGC GTTAAGCTCACTG-GCTGGC TGTTTTTTAATGACA TERM 3083 2818633 - 2818588 - R 100 -7.8 -5.3236 | opp_overlap 2818588 2818586 ATAACCGATAAAAAA GCCAGCTCAGT-TGCTTAAC TGATGGGC GTTAAGCTCACTG-GCTGGC TGTTTTTTAATGACA TERM 3084 2818708 - 2818685 - R 77 -11 -2.81547 | overlap 2818682 GCCGCAGATGAATGA GCAGGTGCAA TAAA CCGCACCTGC CAGAGCAACATTATT YPDSF_2477 2821397 - 2818722 - | DNA gyrase subunit A TERM 3085 2820720 - 2820740 + g 77 -11.9 -3.03771 | opp_overlap 2820718 2820715 CTCTTCAATACCACG GCGGCCATT AAT AATGGCTGC TGTTGGGAAGTCTGG TERM 3086 2820771 - 2820792 + g 73 -5.9 -4.48263 | overlap 2820789 GCCAGGGATATACTC CATCAGC CCTTCAAT GCTGATG TTTTCATCTTCTATA YPDSF_2478 2821659 - 2822387 + | 3-demethylubiquinone-9 3-methyltransferase TERM 3087 2822409 - 2822430 + F 81 -10.9 -3.27786 | gap 1, opp_overlap 2822401 2822405 2822402, overlap 2822401 CGTAGAACCCACTGG GAGCAGG-GC TAA GCACCTGCTC TTCCTGGCTTTTCCC TERM 3088 2823772 - 2823789 + G 70 -8.4 -3.7941 | TCACAGGGCGGTGTT CGTGGC GGCGCG GCCACG TTGTTCTACCCAATG TERM 3089 2824577 - 2824596 + G 71 -10.8 -3.03007 | overlap 2824557 AACAAGGCGCTTGCC CGTGGTTT AACG AAACCACG TATTCACAAGGTATT YPDSF_2479 2822881 - 2825169 + | ribonucleotide-diphosphate reductase subunit alpha nrdB 2825332 - 2826462 + | ribonucleotide-diphosphate reductase subunit beta YPDSF_2481 2826466 - 2826723 + | 2Fe-2S ferredoxin YfaE YPDSF_2482 2826758 - 2827267 + | ecotin precursor TERM 3090 2827299 - 2827278 - T 95 -13 -3.20207 | opp_overlap 2827273 AATAGCACTCATTAA CCAGGCGC TATTCC GCGCCTGG GCTAAATATTAACAT YPDSF_2483 2828518 - 2827325 - | competence damage-inducible protein A YPDSF_2484 2829137 - 2830345 + | tyrosine-specific transport protein TERM 3091 2830363 - 2830390 + T 100 -15 -4.18018 | gap 1, opp_overlap 2830363 CGTAAGCAATAATAA GGGCGCATATCCT GAT AGGA-ATGCGCCC TTTTCCGTCAGCCCA TERM 3092 2830390 - 2830363 - T 100 -15 -4.0342 | gap 1, opp_overlap 2830363 CGTAAGCAATAATAA GGGCGCATATCCT GAT AGGA-ATGCGCCC TTTTCCGTCAGCCCA YPDSF_2485 2831144 - 2830602 - | hypothetical protein TERM 3093 2831779 - 2831764 - g 91 -5.4 -5.42862 | opp_overlap 2831764 AGATCGGTAAAAAAA CAGACA TGTT TGTCCG CTTCTCCACTGTGGC TERM 3094 2832819 - 2832839 + G 70 -9.7 -3.31501 | overlap 2832820 GAGCATCAACGCATG TTCACCCGT ATT GCGGGTGAG TTATCGCAAGTTCCT TERM 3095 2832820 - 2832838 + G 70 -11 -2.58579 | overlap 2832819 AGCATCAACGCATGT TCACCCGT ATT GCGGGTGA GTTATCGCAAGTTCC YPDSF_2486 2831505 - 2832944 + | catalase TERM 3096 2832966 - 2833008 + T 84 -6.5 -4.93318 | gap 1, overlap 2832968 TCAGCCCCTTTGAAC TGCACC-CCAAATGTTGG ATAACCCC CTGACATTTGGAGGTGTA TTTTTATGGCTTATC TERM 3097 2832968 - 2833006 + T 71 -6.9 -4.07789 | gap 1, overlap 2832966 AGCCCCTTTGAACTG CACC-CCAAATGTTGG ATAACCCC CTGACATTTGGAGGTG TATTTTTATGGCTTA dinG 2835192 - 2833012 - | ATP-dependent DNA helicase DinG TERM 3098 2833949 - 2833959 + g 73 -5.4 -4.65895 | CATTTAGAAATCGGC GCAT TCG ATGC TTTTTCCATCGCCGC TERM 3099 2834301 - 2834311 + g 70 -2.4 -5.02476 | GTTCAGGATGGGCAA GCCC AGG GGGG TTTTTTGGCCGGTAT TERM 3100 2836328 - 2836315 - g 73 -5.3 -4.63218 | opp_overlap 2836315 2836324, overlap 2836324 GTTTTGCTAATAAAA CTCAA AACA TTGAG TTAGTGGCTCAATAT YPDSF_2488 2835462 - 2836577 + | outer membrane protein C2 YPDSF_2489 2836796 - 2836614 - | hypothetical protein TERM 3101 2836641 - 2836658 + g 100 -12.7 -5.0133 | GAATGTATTTATTAT GCCGGGA TTAT TCCCGGC TTTTTTACGCCACTC YPDSF_2490 2836989 - 2837879 + | hypothetical protein YPDSF_2491 2837989 - 2838207 + | hypothetical protein YPDSF_2492 2839347 - 2838325 - | amino acid decarboxylase TERM 3102 2838461 - 2838438 - G 71 -11.1 -2.81207 | overlap 2838437 TACTTAAGATATAAC GTAGCCATG GTTCTT CATGGCTAC CAAAACTCTCCCCCG TERM 3103 2839458 - 2839437 - R 84 -10.1 -3.74693 | TGCCACCGTATTAAA GGTGATCGC TCAG GCGGTCACC GAACTCGATAATAAA YPDSF_2493 2840640 - 2839432 - | transposase for the IS285 insertion element YPDSF_2494 2841954 - 2840674 - | amino acid decarboxylase YPDSF_2495 2843358 - 2842024 - | arginine:agmatin antiporter TERM 3104 2842327 - 2842311 - G 71 -10.9 -3.13376 | overlap 2842309 2842308 2842304 2842319 AAACGGAAGAAACCA GGCCAAA CTC TTTGGCC GCATTCGGCGAAATA YPDSF_2496 2843633 - 2843860 + | hypothetical protein YPDSF_2497 2844750 - 2843914 - | ABC transport integral membrane subunit YPDSF_2498 2845685 - 2844747 - | ABC transport ATP-binding subunit YPDSF_2499 2846836 - 2845682 - | ABC transport integral membrane subunit TERM 3105 2847090 - 2847100 + r 71 -4 -4.7497 | overlap 2847073 GGCTGGCTCCCCCAG CTAA TGG TTAG TTTTTAATAAATCCG YPDSF_2500 2848029 - 2847097 - | hypothetical protein TERM 3106 2847832 - 2847843 + g 71 -5.8 -4.31737 | TACGACTTTGGTTGC TCCC AGTT GGGA TTTATTGGTGGTTTT YPDSF_2501 2848765 - 2849619 + | sulfurtransferase TERM 3107 2849645 - 2849627 - T 72 -8.1 -3.83026 | TGGCGTGATACCAAA GGCTGGC TCACC ACCAGCC ACTGACATGACTCAT YPDSF_2502 2851252 - 2849837 - | pyridoxal-dependent decarboxylase YPDSF_2503 2852133 - 2851276 - | hypothetical protein YPDSF_2504 2852946 - 2852248 - | ABC transport ATP-binding subunit TERM 3108 2852385 - 2852371 - G 100 -10 -4.67635 | GGCAAAATCATAAAA CTGCTC CAC GAGCAG GATAGCCATATCCCC YPDSF_2505 2853876 - 2853040 - | ABC transport ATP-binding subunit YPDSF_2506 2854949 - 2853873 - | branched chain amino acid ABC transporter permease TERM 3109 2853977 - 2853960 - G 83 -3.3 -5.46657 | overlap 2853961 CAGGCCAAGAAAAAA TTGCCAG TATT CCGGCAT CGCCATGGTGAACCA YPDSF_2507 2856550 - 2854949 - | branched chain amino acid ABC transporter permease TERM 3110 2856614 - 2856583 - R 100 -10.9 -4.57837 | overlap 2856585 ATATGTGGTGAAAAA GAGCTGACGTCAG ATCCCG CTGACATCAGCAC GTCACAGCGATTACC TERM 3111 2856612 - 2856585 - R 100 -12.1 -3.90316 | overlap 2856583 ATGTGGTGAAAAAGA GCTGACGTCAG ATCCCG CTGACATCAGC ACGTCACAGCGATTA YPDSF_2508 2857942 - 2856674 - | substrate-binding periplasmic transport protein TERM 3112 2858246 - 2858222 - R 72 -6.4 -4.31085 | TATATTAATCTAAAA CAGGCATGGC GGATT ACCACACCTG TTTTTTTACTAACAG YPDSF_2509 2858843 - 2858370 - | hypothetical protein TERM 3113 2858555 - 2858567 + g 73 -3.3 -5.00884 | overlap 2858556 TGTCTTTCAATTCGA ATGCG ACA CGCAG TTTTTTCAACACAAT TERM 3114 2858921 - 2858906 - R 74 -4 -4.94243 | gap 1, overlap 2858901 2858909 GCAAAAAAACTAAAA GAGCGTC TTT GACG-TC TAGCGGGCAGTATTG YPDSF_2510 2859970 - 2859089 - | ABC transport membrane permease TERM 3115 2859895 - 2859917 + g 74 -4 -5.00196 | ATCTGATATAACGTT TCTGCTGCCT GAA AAGCTGCGGA TTTTGTTGTTTCAGC YPDSF_2511 2860833 - 2859973 - | ABC transport membrane permease TERM 3116 2860913 - 2860887 - R 75 -5.9 -4.70659 | gap 1, opp_overlap 2860890, overlap 2860890 2860892 TGTTACACCTAAAAA CAATAGCTCCGG CGAA CCAGAGCCA-TG TTGTTTTATCCGTTG TERM 3117 2860911 - 2860890 - R 93 -8.7 -4.46215 | opp_overlap 2860890, overlap 2860887 2860892 TACACCTAAAAACAA TAGCTCCGG CGAA CCAGAGCCA TGTTGTTTTATCCGT TERM 3118 2860909 - 2860892 - R 78 -9.1 -3.82353 | opp_overlap 2860890, overlap 2860890 2860887 CACCTAAAAACAATA GCTCCGG CGAA CCAGAGC CATGTTGTTTTATCC YPDSF_2512 2861865 - 2860936 - | substrate-binding periplasmic transport protein YPDSF_2513 2862774 - 2861902 - | ABC transport ATP-binding subunit TERM 3119 2862105 - 2862115 + g 73 -5.4 -4.62069 | opp_overlap 2862105, overlap 2862094 2862089 2862107 GTAACGTATTCATAA TACG TGT CGTA TTTTTAGGGTCCAAC TERM 3120 2862810 - 2862849 + r 80 -8.7 -3.96298 | opp_overlap 2862821, overlap 2862815 2862821 TATTGATGATAGTTG CATGTGAAAAAGGTGAC AAAATA GCCACCTTTTTCGTGTG TTTAATTAATGACTG TERM 3121 2862838 - 2862821 - R 71 -4.8 -4.62069 | opp_overlap 2862815 2862810 2862821 GTTGCATGTGAAAAA GGTGAC AAAATA GCCACC TTTTTCGTGTGTTTA YPDSF_2514 2863194 - 2862946 - | hypothetical protein YPDSF_2515 2864482 - 2863379 - | hypothetical protein TERM 3122 2864414 - 2864401 - G 74 -2.3 -5.0707 | opp_overlap 2864402 2864408, overlap 2864402 AAATATAAAAATAAA CGACC CTCA GGTCT TGTTGCACGACTGCA YPDSF_2516 2864794 - 2864624 - | hypothetical protein TERM 3123 2864699 - 2864685 - G 80 -2.7 -5.34365 | opp_overlap 2864687 2864687 CGATAAGAAGAAAAA CGCGC TAATG GCGTG TTGGCGTTTGAGTAT YPDSF_2517 2864795 - 2865136 + | hypothetical protein YPDSF_2518 2865701 - 2865162 - | adenylate cyclase 2 TERM 3124 2865239 - 2865249 + g 71 -6.8 -4.13995 | opp_overlap 2865238 TATTGGCAAAATCAC GGCA TTC TGCC TTTAATTTATCAAGC TERM 3125 2866822 - 2866850 + G 70 -3.2 -4.87626 | gap 1 CTTTAAACATTTACC TATCGCGGGTGAA TATC TGCACC-GTGATA TTTTTGATATTGCGG YPDSF_2519 2865911 - 2867623 + | D-lactate dehydrogenase TERM 3126 2867720 - 2867691 - T 100 -13 -3.7791 | opp_overlap 2867691 CAATTAGTCACTAAA GCGGAATTTGCC TCTGCT AGCAAATTCCGC TTCTCAGTCGCGATG TERM 3127 2867691 - 2867720 + T 95 -12.3 -3.35996 | opp_overlap 2867691 CAATTAGTCACTAAA GCGGAATTTGC CTCTGCTA GCAAATTCCGC TTCTCAGTCGCGATG pbpG 2868715 - 2867744 - | D-alanyl-D-alanine endopeptidase YPDSF_2521 2869018 - 2869197 + | hypothetical protein YPDSF_2522 2870215 - 2869271 - | tRNA-dihydrouridine synthase C TERM 3128 2870493 - 2870445 - R 88 -9.8 -4.07687 | gap 1, opp_overlap 2870451, overlap 2870447 AGTCGTGTGGTAAAA TA-CCCATGGGCAATGCCCATTT ATGA AAATGGACATTGCCAAAGAGATA GTCTAAATACGTATT TERM 3129 2870490 - 2870447 - R 100 -14 -3.63744 | opp_overlap 2870451, overlap 2870445 TCGTGTGGTAAAATA CCCATGGGCAATGCCCATTT ATGA AAATGGACATTGCCAAAGAG ATAGTCTAAATACGT TERM 3130 2870451 - 2870463 + r 78 -9.1 -3.87815 | opp_overlap 2870447 2870445 GTGGTAAAATACCCA TGGGC AAT GCCCA TTTATGAAAATGGAC YPDSF_2523 2871438 - 2870509 - | hypothetical protein TERM 3131 2870758 - 2870736 - G 70 -8.6 -3.72374 | opp_overlap 2870736 2870737 2870752, overlap 2870734 2870737 2870751 2870752 GTTCATTAACAAATA CTTTACCATT AGT AATGGTAAAA TTTACCTCTCCTGAA TERM 3132 2871163 - 2871189 + g 80 -9.5 -4.11404 | opp_overlap 2871167, overlap 2871165 CGAATTCACCGCGTT AACATCACCAC TTACT GTGGTGATGTC TTTATCTACTATAGA TERM 3133 2871165 - 2871187 + g 82 -12.1 -3.65001 | opp_overlap 2871167, overlap 2871163 AATTCACCGCGTTAA CATCACCAC TTACT GTGGTGATG TCTTTATCTACTATA TERM 3134 2871775 - 2871751 - R 100 -9.9 -4.55697 | opp_overlap 2871754, overlap 2871753 2871754 ATTTTGATAAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCATATGCGCCTAT TERM 3135 2871773 - 2871753 - R 100 -12.5 -3.88703 | opp_overlap 2871754, overlap 2871751 2871754 TTTGATAAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 3136 2871772 - 2871754 - R 100 -16 -2.92499 | opp_overlap 2871754, overlap 2871753 2871751 TTGATAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 3137 2871754 - 2871772 + r 100 -16 -4.8048 | opp_overlap 2871754 2871753 2871751 TTGATAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC YPDSF_2524 2872311 - 2871853 - | transposase for the IS1541 insertion element YPDSF_2525 2873101 - 2872301 - | hypothetical protein TERM 3138 2872424 - 2872442 + g 100 -16 -4.36914 | opp_overlap 2872424 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAC TERM 3139 2872442 - 2872424 - G 93 -16 -3.07307 | opp_overlap 2872424 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAC TERM 3140 2872463 - 2872478 + g 76 -4.8 -4.9138 | opp_overlap 2872463 TGGGCACAACAAGAA GAAAAT AGCC ATTTTC TTTTGTTTAAATAAT YPDSF_2526 2874103 - 2873240 - | purine nucleoside phosphorylase YPDSF_2527 2874416 - 2875297 + | membrane protein YPDSF_2528 2876228 - 2875335 - | DNA-binding transcriptional activator XapR YPDSF_2529 2878508 - 2876460 - | choline transport protein BetT TERM 3141 2878440 - 2878422 - G 77 -9.5 -3.7319 | AGTCATAAGACAGAA CGCGAGG ATCAA CCCCGCG GACGTAAAGAACACC TERM 3142 2878827 - 2878812 - H 75 -10.4 -2.73542 | CGTAACGGGTAACTA GCTGCC AATA GGCAGC ATGAATAACAGTATT TERM 3143 2879050 - 2879034 - g 74 -4.4 -4.82901 | opp_overlap 2879048, overlap 2879048 TTTCCGTGACAAAAA TGGCCT GCTAG AAGCCA CAATGAGGTATCTGA YPDSF_2530 2878873 - 2879469 + | transcriptional regulator BetI TERM 3144 2879682 - 2879670 - g 73 -10.5 -3.3197 | ACAGGATGTTGATAA GGCGG TAG CCGCC GCCAAACAAGGTCAG YPDSF_2531 2879527 - 2880999 + | betaine aldehyde dehydrogenase YPDSF_2532 2881022 - 2882725 + | choline dehydrogenase TERM 3145 2882880 - 2882848 - T 100 -11.3 -5.63517 | opp_overlap 2882855, overlap 2882854 2882855 TGGTGAAAGAAAAAA TAAATATCCTCCGGC ATA GCCGGAGGTTTTTCA TATGCGCCTATAAGG TERM 3146 2882874 - 2882854 - T 100 -12.5 -4.1934 | opp_overlap 2882855, overlap 2882848 2882855 AAGAAAAAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 3147 2882873 - 2882855 - T 100 -16 -3.07944 | opp_overlap 2882855, overlap 2882854 2882848 AGAAAAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 3148 2882855 - 2882873 + T 100 -16 -4.8048 | opp_overlap 2882855 2882854 2882848 AGAAAAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC YPDSF_2533 2883412 - 2882954 - | transposase for the IS1541 insertion element TERM 3149 2883525 - 2883543 + r 100 -16 -4.36914 | opp_overlap 2883525 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAC TERM 3150 2883543 - 2883525 - R 100 -16 -3.07307 | opp_overlap 2883525 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAC TERM 3151 2883564 - 2883584 + r 100 -11.9 -3.88498 | opp_overlap 2883564 TGGGCACAACAAAAA GGACACCAG ATT TTGGTGTCC TTTACTATCTCAAAC TERM 3152 2883584 - 2883564 - R 100 -11.2 -5.18726 | opp_overlap 2883564 TGGGCACAACAAAAA GGACACCA GATTT TGGTGTCC TTTACTATCTCAAAC YPDSF_2534 2884357 - 2883647 - | membrane protein TERM 3153 2884157 - 2884144 - G 85 -3.8 -5.38549 | overlap 2884147 CGGAAATAACAAAAA CCAG ACCAAG CTGG GCAATAATCAAGCCA MoaE 2884952 - 2884500 - | molybdopterin synthase large subunit moaD 2885200 - 2884955 - | molybdopterin synthase small subunit moaC 2885676 - 2885197 - | molybdenum cofactor biosynthesis protein C moaA 2886802 - 2885777 - | molybdenum cofactor biosynthesis protein A YPDSF_2539 2887289 - 2888212 + | hypothetical protein YPDSF_2540 2888588 - 2888343 - | hypothetical protein YPDSF_2541 2890895 - 2888880 - | excinuclease ABC subunit B TERM 3154 2890787 - 2890806 + g 71 -7.8 -4.08216 | overlap 2890770 2890768 2890788 CTGTTACGCCTAGCA GGGTCTGG TGTG CCAGACCA TTTTCCAGCCCCTCC TERM 3155 2890788 - 2890805 + g 74 -11.3 -3.04715 | overlap 2890770 2890768 2890787 TGTTACGCCTAGCAG GGTCTGG TGTG CCAGACC ATTTTCCAGCCCCTC TERM 3156 2892215 - 2892192 - g 74 -8.2 -4.09739 | TGAACCCCCGCAAAA CTTGCAACAG CAGC CTGTTGAAAG ACGCAATGCGTTAGG TERM 3157 2892323 - 2892343 + G 90 -9 -4.6856 | gap 1, opp_overlap 2892322 2892323 CAGGCCGCCACAAAT CCCA-CCCG ATTC CGGGCTGGG TTTTTGAGCTATTTC YPDSF_2542 2891986 - 2892696 + | amino acid transporter bioD 2893570 - 2892848 - | dithiobiotin synthetase TERM 3158 2893357 - 2893344 - G 79 -5.3 -5.00616 | opp_overlap 2893344 GTCGCTTCCAAAAAA GTGAA CGGA TTCAC TTGTGAGTAACCGAG YPDSF_2544 2894366 - 2893563 - | biotin synthesis protein BioC TERM 3159 2893839 - 2893828 - G 76 -3 -5.09426 | opp_overlap 2893806 TGCAATGGCAAAAAA TCAT TTAC ATGA CGCTGACCATCCACC YPDSF_2545 2895501 - 2894350 - | 8-amino-7-oxononanoate synthase YPDSF_2546 2896538 - 2895501 - | biotin synthase TERM 3160 2897771 - 2897781 + G 74 -6.8 -4.36914 | GTTAATGTCGCCCGC CTGC AAC GCAG TTTTGTCGAACAGGG YPDSF_2547 2896637 - 2897917 + | adenosylmethionine--8-amino-7-oxononanoate transaminase YPDSF_2548 2899106 - 2898102 - | 6-phosphogluconolactonase YPDSF_2549 2899397 - 2900218 + | phosphotransferase modC 2901353 - 2900274 - | molybdate transporter ATP-binding protein TERM 3161 2901349 - 2901367 + g 93 -8.8 -5.01732 | overlap 2901350 CTGAAATTCAGTTCT AGCATGGG GCC CCCATGCG TTTTTTACCCCAATT TERM 3162 2901350 - 2901366 + g 82 -12.3 -3.60316 | overlap 2901349 TGAAATTCAGTTCTA GCATGGG GCC CCCATGC GTTTTTTACCCCAAT modB 2902042 - 2901347 - | molybdate ABC transporter permease protein TERM 3163 2901886 - 2901859 - G 73 -10.6 -3.19657 | overlap 2901854 2901852 2901862 ACAAGAGATAGCCAA TCACCACCGGTG GCAG CACCAGTGGCAA ATGAATCACACTGTC TERM 3164 2901883 - 2901862 - G 74 -12.3 -2.78422 | overlap 2901859 2901854 2901852 AGAGATAGCCAATCA CCACCGGTG GCAG CACCAGTGG CAAATGAATCACACT modA 2902821 - 2902042 - | molybdate transporter periplasmic protein TERM 3165 2902611 - 2902582 - G 71 -5 -4.44046 | gap 1 GTCAGCGGAAATAAA CAGATCG-GCCGG TGCCC CCTGCTCAATCTG CCGTGCCAGCGTGGA TERM 3166 2903005 - 2902982 - R 89 -7.4 -5.04175 | GGAATGATACAAAAA TGCCCAACGT TTAT ACGCCAGGCA TTCAGAAATCAGAGA YPDSF_2553 2903208 - 2903056 - | hypothetical protein TERM 3167 2903303 - 2903264 - H 78 -9.6 -3.59279 | gap 1, opp_overlap 2903266 2903279, overlap 2903261 TATCACAATAACCAA CACTGCTGCCTATCATTTA CTG TAAATGATAT-CAGCAATG AATTAACCCTGTTAT YPDSF_2554 2903474 - 2904265 + | DNA-binding transcriptional regulator ModE TERM 3168 2904714 - 2904740 + G 70 -8.7 -3.59979 | overlap 2904716 GCGGCCCGTGACCCG CAGCGCTGTCA ACAAC TGGCAGCGCTA TTTGGAATCAGCCAC TERM 3169 2904716 - 2904738 + G 77 -11.3 -3.38046 | overlap 2904714 GGCCCGTGACCCGCA GCGCTGTCA ACAAC TGGCAGCGC TATTTGGAATCAGCC TERM 3170 2905444 - 2905459 + G 78 -4 -5.16572 | gap 1, overlap 2905415 2905438 GCACCCGTGTACGTA CCGTGAT TTT ATC-CGG TTTTTTCGATTCGAT YPDSF_2555 2904375 - 2905865 + | putative molybdenum transport ATP-binding protein ModF TERM 3171 2906025 - 2906015 - f 78 -2.4 -5.44119 | TTTAGCTCAAAAAAA TGCC TTA GGCT AAACCGTCATTTAGG TERM 3172 2906491 - 2906475 - f 77 -3.6 -5.09426 | TTCAAGGTGAAAAAA CACCCA TCAGT CGGGCG CATGGGTTGTGCTGA TERM 3173 2907445 - 2907456 + G 70 -4.4 -4.60487 | TCCGTGATCGCACAC TGCT CGAT AGCA TTTTTGCGGCTCATC TERM 3174 2908108 - 2908089 - g 73 -9.2 -3.76224 | opp_overlap 2908094 GCCGCATTCAGTAAA GCCTGTGG TAAA CCACTGGC CTACCATTTTGCCCC YPDSF_2558 2907255 - 2908271 + | UDP-galactose-4-epimerase YPDSF_2559 2908281 - 2909333 + | galactose-1-phosphate uridylyltransferase YPDSF_2560 2909330 - 2910481 + | galactokinase TERM 3175 2910578 - 2910566 - g 70 -3.3 -4.78839 | overlap 2910567 AATTGCAGAATAAAA GCGGT ATG ACCGT CACCTTTATGAATGG YPDSF_2561 2910475 - 2910627 + | hypothetical protein galM 2910648 - 2911544 + | aldose 1-epimerase YPDSF_2563 2911837 - 2912172 + | starvation-inducible protein YPDSF_2564 2912519 - 2913271 + | phosphoglycerate mutase 1 TERM 3176 2913299 - 2913322 + F 95 -7.5 -5.4505 | gap 1, opp_overlap 2913299 AACACAGTAAAAAAA CCCCGTACAT GAATA ATGT-CGGGG TTTTTTATTGACGGC TERM 3177 2913322 - 2913299 - f 100 -7.5 -5.62219 | gap 1, opp_overlap 2913299 AACACAGTAAAAAAA CCCCGTACAT GAATA ATGT-CGGGG TTTTTTATTGACGGC TERM 3178 2913907 - 2913893 - f 70 -5.7 -4.33417 | opp_overlap 2913898 GTCACCGACAAGAAA CAGTG TGGGG CACTG GCCGCGTTGATCGCA TERM 3179 2913939 - 2913955 + F 93 -8.7 -4.56597 | CAATAGCCACTTTAA TGGTGCC GTC GGTACCA TTTTTAAAACCAACG TERM 3180 2914105 - 2914087 - f 73 -5.2 -4.72333 | opp_overlap 2914088 2914092, overlap 2914088 AATCATATCCAAAAA CTCACCGG CGG CCGGTAAC CCGCTGTCGTTAATT TERM 3181 2914104 - 2914088 - f 73 -8.7 -3.42315 | opp_overlap 2914088 2914092, overlap 2914087 ATCATATCCAAAAAC TCACCGG CGG CCGGTAA CCCGCTGTCGTTAAT TERM 3182 2914092 - 2914114 + F 73 -9 -3.51411 | opp_overlap 2914088 2914087, overlap 2914088 TATCCAAAAACTCAC CGGCGGCCGG TAA CCCGCTGTCG TTAATTTCGACGAGT YPDSF_2567 2914928 - 2915866 + | zinc transporter ZitB YPDSF_2568 2916706 - 2915981 - | intergral membrane NMN transport protein PnuC YPDSF_2569 2917889 - 2916828 - | quinolinate synthetase TERM 3183 2917110 - 2917094 - G 76 -4.4 -5.02074 | gap 1 GCATCTTGTAAAAAA TGCC-CC GATC GGTGGCA ACAATTAACGTTTTC TERM 3184 2918001 - 2917991 - R 70 -5.4 -4.54026 | opp_overlap 2917997, overlap 2917995 2917997 TCCTAAACAAAATAA CCAA TAT TTGG CAAAAAGTCGCCAAA TERM 3185 2918236 - 2918251 + r 73 -9 -3.5399 | overlap 2918231 ACTCGCCCTTCGGGT CAACGC TGGC GCGTTG TTGTCTCGCTCTGCT TERM 3186 2918403 - 2918418 + r 73 -9 -3.5399 | overlap 2918398 ACTCGCCCTTCGGGT CAACGC TGGC GCGTTG TTGTCTCGCTCTGCT TERM 3187 2918882 - 2918848 - R 100 -14.4 -4.0162 | TCTTCACACGATAAA GCCCAGAAATCAGTCA AAT TGACTAAATCCTGGGC TCAAAAAAGCTAAAG YPDSF_2570 2919701 - 2918892 - | hypothetical protein YPDSF_2571 2920217 - 2919711 - | peptidoglycan-associated outer membrane lipoprotein tolB 2921560 - 2920268 - | translocation protein TolB tolA 2922861 - 2921680 - | cell envelope integrity inner membrane protein TolA TERM 3188 2921998 - 2922022 + g 73 -5.1 -4.70879 | gap 1 GGCAGCAGCGGCACC TGCACCCGAA CCACTC TTCGG-TGCA TTTTTAGCGTTTGCC TERM 3189 2922068 - 2922090 + g 100 -9 -5.46657 | opp_overlap 2922056 2922054, overlap 2922070 2922082 TCATCAACATCCGTT GAGGCAGCCG CTT CTGCTGCCGC TTTTTTCTTGGCCTC TERM 3190 2922070 - 2922088 + g 70 -10.2 -2.91061 | opp_overlap 2922054, overlap 2922068 2922082 ATCAACATCCGTTGA GGCAGCCG CTT CTGCTGCC GCTTTTTTCTTGGCC TERM 3191 2922128 - 2922138 + g 80 -2.4 -5.38047 | GCAGCAACTTTTTTA GCAG CAG CGGC TTTTTTCTCTGCATC TERM 3192 2922430 - 2922443 + g 76 -3.1 -5.11254 | TTCAGCGGCCTGCTT TTGCT GTTC AGCGA TTTGTTTTTGTTGTT YPDSF_2574 2923386 - 2922958 - | colicin uptake protein TolR YPDSF_2575 2924085 - 2923399 - | colicin uptake protein TolQ YPDSF_2576 2924486 - 2924085 - | acyl-CoA thioester hydrolase YbgC TERM 3193 2924598 - 2924571 - R 76 -7 -4.57218 | opp_overlap 2924569, overlap 2924574 2924575 AGAATAGAACGAAAA TAATTATGGGCC GGAT GGCCCATAGGTA GGATTGTGCTCAAGG TERM 3194 2924595 - 2924574 - R 86 -8.7 -4.36586 | opp_overlap 2924569, overlap 2924571 2924575 ATAGAACGAAAATAA TTATGGGCC GGAT GGCCCATAG GTAGGATTGTGCTCA TERM 3195 2924594 - 2924575 - R 86 -12.2 -3.20325 | opp_overlap 2924569, overlap 2924574 2924571 TAGAACGAAAATAAT TATGGGCC GGAT GGCCCATA GGTAGGATTGTGCTC YPDSF_2577 2924950 - 2924618 - | hypothetical protein TERM 3196 2924870 - 2924854 - G 80 -10.8 -3.69323 | opp_overlap 2924854 CGAGCACCAGTGAAA GGGCCC TCAAT GGGCCC TTATCCATTAATTCG TERM 3197 2924854 - 2924870 + g 75 -10.8 -3.45134 | opp_overlap 2924854 CGAGCACCAGTGAAA GGGCCC TCAAT GGGCCC TTATCCATTAATTCG YPDSF_2578 2926181 - 2925042 - | cytochrome D ubiquinol oxidase subunit II TERM 3198 2926037 - 2926056 + g 82 -7.2 -4.60487 | opp_overlap 2926037 CAATCGAGTTAATCA TGATACGG CGCT CTGTATCA TTTTTACCGATGATA YPDSF_2579 2927764 - 2926196 - | cytochrome D ubiquinol oxidase subunit I TERM 3199 2927720 - 2927704 - G 76 -5.1 -4.87786 | TTAATGGGACAAAAA GGAAATG GTA CATTGCC GTTAAGGCAAACTGT TERM 3200 2928026 - 2928005 - R 70 -8.1 -3.62046 | opp_overlap 2928005 2928004 GCATTTTGGTAACAA TGTCGTAAA TTGA TCTACGACA ATTTAAGCCTATATG TERM 3201 2928229 - 2928245 + r 70 -3.7 -4.7889 | overlap 2928224 TAAATTCAGAGTGAG TCAAATC ACA GTTTTGA TTTTTACATATTTAT TERM 3202 2928492 - 2928468 - R 100 -9.9 -4.55697 | opp_overlap 2928471, overlap 2928470 2928471 ATTTGTATAAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCATATGCGCCTAT TERM 3203 2928490 - 2928470 - R 100 -12.5 -3.88703 | opp_overlap 2928471, overlap 2928468 2928471 TTGTATAAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 3204 2928471 - 2928489 + r 100 -16 -4.8048 | opp_overlap 2928470 2928468 2928471 TGTATAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 3205 2928489 - 2928471 - R 100 -16 -2.92499 | opp_overlap 2928471, overlap 2928470 2928468 TGTATAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC YPDSF_2580 2929028 - 2928570 - | transposase for the IS1541 insertion element TERM 3206 2929141 - 2929159 + r 100 -16 -4.36914 | opp_overlap 2929141 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 3207 2929159 - 2929141 - R 100 -16 -3.07307 | opp_overlap 2929141 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 3208 2929195 - 2929178 - R 100 -12.7 -5.24129 | opp_overlap 2929176 TCTGGGCACAAAAAA GGCCACC AAAA GGTGGCC AGTATGTCGCGTTAG YPDSF_2581 2930114 - 2929242 - | succinyl-CoA synthetase subunit alpha sucC 2931280 - 2930114 - | succinyl-CoA synthetase subunit beta TERM 3209 2931026 - 2931040 + g 74 -2.1 -5.08824 | overlap 2931027 TCCGTTGGCATCTGT TTGGT AAGTG ACCAG TTTTTTACCTAGCCA TERM 3210 2931308 - 2931321 + r 70 -9.5 -2.81045 | overlap 2931305 ATATAAGGTCTGAGA CGGGC CGAA GCCCG TAGTGTTCTGGATAA YPDSF_2583 2932616 - 2931393 - | dihydrolipoamide acetyltransferase kgd 2935453 - 2932646 - | alpha-ketoglutarate decarboxylase TERM 3211 2933774 - 2933791 + g 74 -8.3 -4.08919 | AGAGCTGATCCGACG CGCCAGC TCTT GCAGGCG TTTCATTTCAACTTT TERM 3212 2934894 - 2934910 + g 83 -5.1 -5.12971 | opp_overlap 2934894 2934892, overlap 2934898 ACAACCGATTCAATA CGCTG CTGAATC CAGCG TTTTTCTTCGGTGTT TERM 3213 2935394 - 2935367 - G 76 -6.4 -4.68994 | gap 1, opp_overlap 2935367, overlap 2935369 AGGATCAGTTAAAAA GTC-TTCATAGAG CTG CTCTATGTAGGAC TGGTTCGCGCCCGCC TERM 3214 2935546 - 2935560 + r 70 -7.1 -3.75378 | AAACGGTTCACTCGA CGTGC TCAAT GCACG TTCTGTTATGGACCT TERM 3215 2935649 - 2935670 + r 84 -11.6 -3.16683 | opp_overlap 2935649 CCTACCGTGAAGCTA CCCGGAGA ATCCCC TCTCCGGG TTAATAAACTCACAT TERM 3216 2935670 - 2935649 - R 86 -12.3 -2.53263 | opp_overlap 2935649 CCTACCGTGAAGCTA CCCGGAGAA TCCC CTCTCCGGG TTAATAAACTCACAT sdhB 2936525 - 2935809 - | succinate dehydrogenase iron-sulfur subunit sdhA 2938341 - 2936575 - | succinate dehydrogenase flavoprotein subunit TERM 3217 2937620 - 2937589 - G 74 -11.6 -3.18264 | gap 1, opp_overlap 2937616 2937617, overlap 2937591 GCCTTCAGTCACTAA TACACCCGCACCGGC AAT ACCGGT-CGGGTGGA ACTGCCACATTTCCA TERM 3218 2937618 - 2937591 - G 86 -14.2 -3.1552 | gap 1, opp_overlap 2937616 2937617, overlap 2937589 CTTCAGTCACTAATA CACCCGCACCGGC AAT ACCGGT-CGGGTG GAACTGCCACATTTC sdhD 2938689 - 2938342 - | succinate dehydrogenase cytochrome b556 small membrane subunit sdhC 2939072 - 2938683 - | succinate dehydrogenase cytochrome b556 large membrane subunit gltA 2939782 - 2941062 + | type II citrate synthase TERM 3219 2941123 - 2941092 - T 79 -10.9 -3.09823 | opp_overlap 2941097, overlap 2941087 2941097 CCGCGTAAAATTAGA GCAAAGTCCCGGC TAGGAG GCCAGGACTTTGT TAGCAATTTGAGGCA TERM 3220 2941118 - 2941097 - T 83 -9.4 -3.92694 | opp_overlap 2941097, overlap 2941092 2941087 TAAAATTAGAGCAAA GTCCCGGC TAGGAG GCCAGGAC TTTGTTAGCAATTTG TERM 3221 2941097 - 2941118 + T 76 -7.9 -4.19371 | opp_overlap 2941092 2941087 2941097 TAAAATTAGAGCAAA GTCCCGGCT AGGA GGCCAGGAC TTTGTTAGCAATTTG TERM 3222 2941135 - 2941151 + T 85 -9.4 -4.19238 | TTGTTAGCAATTTGA GGCACC GTTGA GGTGCC TTTTAACGTTAGAGC YPDSF_2590 2941748 - 2941170 - | heat shock protein GrpE ppnK 2941872 - 2942753 + | inorganic polyphosphate/ATP-NAD kinase YPDSF_2592 2942840 - 2944501 + | recombination and repair protein TERM 3223 2944887 - 2944871 - g 76 -3 -5.14563 | CTGGTCACGAAAAAA TAACGC AACAA ACGTTA ACGTTGACCTTTGAT YPDSF_2593 2944615 - 2944956 + | hypothetical protein TERM 3224 2945087 - 2945109 + T 78 -4.1 -5.1101 | opp_overlap 2945088, overlap 2945088 2945091 GAGTGACAACAAAAA ATAAGGCGC TGATT GTGCCTTAC TTTTTTGCCTGCTCA TERM 3225 2945108 - 2945088 - T 87 -5.4 -5.56673 | opp_overlap 2945088 2945087 2945091 AGTGACAACAAAAAA TAAGGCGC TGATT GTGCCTTA CTTTTTTGCCTGCTC TERM 3226 2945088 - 2945108 + T 70 -7.6 -3.65883 | opp_overlap 2945088, overlap 2945087 2945091 AGTGACAACAAAAAA TAAGGCGC TGATT GTGCCTTA CTTTTTTGCCTGCTC YPDSF_2594 2945390 - 2945106 - | hypothetical protein YPDSF_2595 2945817 - 2945383 - | hypothetical protein smpB 2945966 - 2946460 + | SsrA-binding protein TERM 3227 2946945 - 2946919 - f 93 -12.2 -3.71527 | opp_overlap 2946919, overlap 2946913 GGTGAAGTACGGAAA GCCCGCATCCCT TCT AGGTTTGCGGGC TTTTTTGTGCCCAGA TERM 3228 2946919 - 2946945 + F 100 -12.2 -5.24129 | opp_overlap 2946913 2946919 GGTGAAGTACGGAAA GCCCGCATCCCT TCT AGGTTTGCGGGC TTTTTTGTGCCCAGA TERM 3229 2946964 - 2946982 + F 100 -16 -3.07307 | opp_overlap 2946964 TTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC TERM 3230 2946982 - 2946964 - f 100 -16 -4.36914 | opp_overlap 2946964 TTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC YPDSF_2597 2947095 - 2947553 + | transposase for the IS1541 insertion element TERM 3231 2947621 - 2947665 + F 95 -12.9 -2.96216 | opp_overlap 2947634, overlap 2947627 2947631 2947633 2947634 ACAGAGCCTTATAGG CGCATATGAAAAACCTCCGGC TAT GCCGGAGGATATTTATTTGTG TCTGTAGTAGTCCAA TERM 3232 2947627 - 2947659 + F 100 -11.3 -4.18367 | opp_overlap 2947634, overlap 2947621 2947631 2947633 2947634 CCTTATAGGCGCATA TGAAAAACCTCCGGC TAT GCCGGAGGATATTTA TTTGTGTCTGTAGTA TERM 3233 2947631 - 2947655 + F 100 -9.9 -4.66625 | opp_overlap 2947634, overlap 2947627 2947621 2947633 2947634 ATAGGCGCATATGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTTGTGTCTGT TERM 3234 2947633 - 2947653 + F 100 -12.5 -3.92887 | opp_overlap 2947634, overlap 2947631 2947627 2947621 2947634 AGGCGCATATGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTTGTGTCT TERM 3235 2947652 - 2947634 - f 100 -16 -4.8048 | opp_overlap 2947634 2947633 2947631 2947627 2947621 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTGTGTC TERM 3236 2947634 - 2947652 + F 100 -16 -2.94105 | opp_overlap 2947634, overlap 2947633 2947631 2947627 2947621 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTGTGTC TERM 3237 2947851 - 2947865 + G 73 -2.8 -4.92756 | opp_overlap 2947847, overlap 2947849 CAAAGACCTAACCCT CCATGA TGG TGATGG TTTATTTTTGCTAGT YPDSF_2598 2947777 - 2948976 + | prophage integrase TERM 3238 2949468 - 2949456 - g 73 -6.3 -4.47707 | opp_overlap 2949455 CCTCACTAAAAACAA CAAGT TAA ACTTG GCTTCATATAAACTG YPDSF_2599 2949055 - 2950143 + | hypothetical protein TERM 3239 2950348 - 2950362 + G 76 -4.2 -5.03747 | overlap 2950350 TGATTTTTTGGACTT TTGGCT GTG AGCCCA TTTTTTCCGAGGTTT TERM 3240 2950929 - 2950913 - g 89 -2.3 -5.73339 | overlap 2950922 AGAATCAGAAAAAAA CAAAAAA AAC CTTCTTG AAGAAAGAACTAACT TERM 3241 2950936 - 2950922 - g 100 -5 -6.47325 | overlap 2950913 AAAAAACAAAAAAAA CCTTCT TGA AGAAAG AACTAACTTAAGAGT TERM 3242 2950975 - 2950960 - g 83 -5.4 -5.09173 | overlap 2950962 2950963 TAAGAGTTGAAAAAA TACGAC TTGA GTCGCA AATCAAATTAGCCAA TERM 3243 2951163 - 2951141 - g 73 -3.4 -5.055 | GGAACTTGCAAAAAA CCAACTCGAA TCC TTAGAGTCAG AAGTCAACGGAATAA YPDSF_2600 2950194 - 2951339 + | hypothetical protein YPDSF_2601 2951615 - 2951863 + | hypothetical protein TERM 3244 2952008 - 2952050 + F 78 -7.1 -4.57569 | opp_overlap 2952024 CAGTTGTTTTAGCCG GGGCGTTGCATGCAAAT TCATGCACT ATATGCATGCAGTGCTC TTTTTGGCAGGCTAG YPDSF_2602 2952715 - 2953038 + | hypothetical protein YPDSF_2603 2953060 - 2953947 + | putative DNA-binding prophage protein YPDSF_2604 2953940 - 2954140 + | transcriptional regulator YPDSF_2605 2954140 - 2954682 + | prophage protein YPDSF_2606 2954675 - 2955634 + | prophage DNA primase YPDSF_2607 2955631 - 2956719 + | regulatory prophage protein YPDSF_2608 2957382 - 2957068 - | DNA-binding prophage protein TERM 3245 2957121 - 2957132 + g 74 -4.4 -4.88228 | opp_overlap 2957121 CCGTTGCAGATACCA CACT AAGC AGTG TTTTTAGTGTTGGAT YPDSF_2609 2957705 - 2957388 - | prophage protein TERM 3246 2957714 - 2957731 + H 80 -9.9 -3.58305 | opp_overlap 2957713 2957711 TTTTCATCAATATAT TGTAGCC TTTA GGCTACA TTTCGCAAGTTGATT TERM 3247 2958010 - 2957984 - H 93 -12.2 -3.71527 | opp_overlap 2957984, overlap 2957978 GGTGAAGTACGGAAA GCCCGCATCCCT TCT AGGTTTGCGGGC TTTTTTGTGTCTGTA TERM 3248 2957984 - 2958010 + H 100 -12.2 -5.4492 | opp_overlap 2957978 2957984 GGTGAAGTACGGAAA GCCCGCATCCCT TCT AGGTTTGCGGGC TTTTTTGTGTCTGTA YPDSF_2610 2958120 - 2958296 + | hypothetical protein TERM 3249 2958288 - 2958306 + F 100 -13.2 -4.01078 | CCAGGGGGTAATCTG CTCTCCTG ATT CAGGAGAG TTTATGGTCACTTTT YPDSF_2611 2958310 - 2959332 + | transposase TERM 3250 2959413 - 2959399 - g 77 -11.4 -3.3506 | overlap 2959390 TGGAAAGCCTTATAA GCGCAG CGC CTGCGC TGTCACAACAGGCAG YPDSF_2612 2959332 - 2960111 + | transposase/IS protein YPDSF_2614 2960658 - 2960921 + | IS1400 transposase A TERM 3251 2961332 - 2961319 - f 78 -9.5 -3.737 | opp_overlap 2961317 2961314 CAACCTTCTACGAAA GGGGC GTTC GCCCC AATAGTTAATCAAGA YPDSF_2616 2962314 - 2963081 + | hypothetical protein YPDSF_2617 2963413 - 2963700 + | LexA regulated protein TERM 3252 2963712 - 2963755 + F 73 -6 -4.43859 | opp_overlap 2963693 2963719, overlap 2963719 CTAACCCTGTCGGTT ACCACAACAGCGTGGTGTAA GTGA TTACGCCACGCTGTTATTAC TTTTATGCCGTTATG TERM 3253 2963748 - 2963719 - f 100 -15.1 -3.40403 | opp_overlap 2963719 2963712 TGTCGGTTACCACAA CAGCGTGGTGTAA GTGA TTACGCCACGCTG TTATTACTTTTATGC TERM 3254 2963719 - 2963748 + F 100 -17.3 -3.9978 | opp_overlap 2963719, overlap 2963712 TGTCGGTTACCACAA CAGCGTGGTGTAA GTGA TTACGCCACGCTG TTATTACTTTTATGC YPDSF_2618 2963796 - 2964044 + | hypothetical protein YPDSF_2619 2964117 - 2964644 + | flavodoxin FldA TERM 3255 2964695 - 2964659 - f 100 -12.4 -3.61517 | opp_overlap 2964659 2964663, overlap 2964663 ATCTCCCCGCAACAA GAAACGCTCTGCGATA GTATT CACAGCAGAGCGTTTC TGTTCCAGTCACTGG TERM 3256 2964659 - 2964695 + F 71 -9.6 -3.06492 | opp_overlap 2964659 2964663, overlap 2964663 ATCTCCCCGCAACAA GAAACGCTCTGC GATAGTATTCACA GCAGAGCGTTTC TGTTCCAGTCACTGG TERM 3257 2964691 - 2964663 - f 78 -7.4 -4.44667 | opp_overlap 2964659 2964663, overlap 2964659 CCCCGCAACAAGAAA CGCTCTGCGATA GTATT CACAGCAGAGCG TTTCTGTTCCAGTCA fur 2965011 - 2965457 + | ferric uptake regulator TERM 3258 2965787 - 2965769 - T 100 -11.7 -5.40072 | TTTCGGGCAAAAAAA TCCCCGG ACCAG CCGGGGA AATACGATCAACTCA YPDSF_2621 2968000 - 2965898 - | Beta-N-acetylhexosaminidase TERM 3259 2966387 - 2966357 - GT 76 -10.4 -3.05844 | overlap 2966370 CGTTTCATTCCAAGA CTGACCGGAGATAC CCT GTACACCCGGCCAG GGTTTATCACTCTTC YPDSF_2622 2968562 - 2967939 - | hypothetical protein YPDSF_2623 2970311 - 2968890 - | hypothetical protein TERM 3260 2969935 - 2969953 + g 71 -7.4 -4.11623 | TCGTCCCAGCGGGTT TTGGCGTC ACT GAAGCCAA TTTCATTTGGTGCTG TERM 3261 2970994 - 2970975 - R 100 -10.7 -5.43414 | opp_overlap 2970973 ATCAGAGACAAAAAA GGCGTGG ACTGTG CCACGCC AATTGAATCTGAGCG YPDSF_2624 2972684 - 2971017 - | glutaminyl-tRNA synthetase TERM 3262 2972785 - 2972808 + r 100 -15.4 -3.4052 | opp_overlap 2972785 AACAAAACAAAAAAA CGGGAAGAGA TCGC TCTCTTCCCG TTGGTTCGATTAAAA TERM 3263 2972808 - 2972785 - R 100 -15.4 -6.17669 | opp_overlap 2972785 AACAAAACAAAAAAA CGGGAAGAGA TCGC TCTCTTCCCG TTGGTTCGATTAAAA YPDSF_2625 2974932 - 2972899 - | pts system, N-acetylglucosamine-specific IIABC component nagB 2975332 - 2976132 + | glucosamine-6-phosphate deaminase TERM 3264 2976524 - 2976514 - g 80 -2.4 -5.42862 | ATATCTGCAAAAAAA CCAG CAT CAGG CGCTCGGCTTGCACC nagA 2976152 - 2977297 + | N-acetylglucosamine-6-phosphate deacetylase YPDSF_2628 2977275 - 2978540 + | N-acetylglucosamine regulatory protein TERM 3265 2978885 - 2978871 - g 80 -4.2 -5.06451 | CAGGATGGCAAAAAA GCCTAT GTT ATTGGC GAGGGTGCTTTAGTT YPDSF_2629 2978613 - 2979365 + | UMP phosphatase asnB 2979720 - 2981384 + | asparagine synthetase B TERM 3266 2981415 - 2981398 - T 78 -9.8 -3.53189 | AATTGAACACGATAA GCGGGG TTAATC CCCCGC GCCGACTGCTGACAA TERM 3267 2981568 - 2981592 + T 100 -14.3 -5.47218 | opp_overlap 2981568 2981567 2981563 2981571 ATAGAGAATAGATAG CAAGGTCGCCT CTG GGGCGGCCTTG TTTTTTTACGTCACC TERM 3268 2981592 - 2981568 - T 79 -11.4 -2.50385 | opp_overlap 2981568, overlap 2981567 2981563 2981571 ATAGAGAATAGATAG CAAGGTCGCC TCTGG GGCGGCCTTG TTTTTTTACGTCACC TERM 3269 2982103 - 2982065 - T 79 -11.7 -2.53911 | opp_overlap 2982056 2982068 CCAAGCGGTAAGGCA CCAGGTTTTGATCCTGG CATTC CCAGGTTCGAATCCTGG TATCCCAGCCATCTT TERM 3270 2982261 - 2982223 - T 79 -11.7 -2.53911 | opp_overlap 2982226 CCAAGCGGTAAGGCA CCAGGTTTTGATCCTGG CATTC CCAGGTTCGAATCCTGG TATCCCAGCCATACA TERM 3271 2982473 - 2982488 + T 100 -8.2 -5.1971 | opp_overlap 2982473 2982468 GCCAAATTTAGAAAA GCTCGC TTCG GCGGGC TTTTTGCTTTTTCAT TERM 3272 2982488 - 2982473 - T 73 -6 -4.51196 | opp_overlap 2982473, overlap 2982468 GCCAAATTTAGAAAA GCTCGC TTCG GCGGGC TTTTTGCTTTTTCAT TERM 3273 2982677 - 2982653 - T 100 -16.5 -2.73364 | overlap 2982669 CCGTCAGCGGAATGA TGAGCCCGGCA GAA TACCGGGCTCA GGCAGAAAGGCAGTA ubiF 2984036 - 2982855 - | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase TERM 3274 2984066 - 2984081 + H 70 -5.4 -4.52589 | opp_overlap 2984080, overlap 2984067 AAAAGTGAATGTACT TCTTGC ATTA GCAAGG TTTTGTCTAACCGCA YPDSF_2632 2984263 - 2985702 + | tRNA-thiotransferase TERM 3275 2985776 - 2985799 + F 86 -6.7 -5.07652 | opp_overlap 2985778, overlap 2985778 TCCCGCCCGCGTAAC GAGGCACTG CATTGT CAGTGCCTG TTTTATTTTAGCGGG TERM 3276 2985778 - 2985797 + F 85 -9.3 -4.16397 | opp_overlap 2985778, overlap 2985776 CCGCCCGCGTAACGA GGCACTG CATTGT CAGTGCC TGTTTTATTTTAGCG YPDSF_2633 2986029 - 2987102 + | hypothetical protein YPDSF_2634 2987099 - 2987572 + | putative metalloprotease YPDSF_2635 2987704 - 2987552 - | hypothetical protein TERM 3277 2987840 - 2987830 - gH 73 -5.4 -4.64676 | overlap 2987831 TGATTCTGAACAAAA CGAT CTG ATCG ATCCCGATACCCGAG YPDSF_2636 2987690 - 2988568 + | membrane protein TERM 3278 2988600 - 2988626 + GF 84 -11.6 -3.11701 | overlap 2988611 2988613 GCTCTATTCCTCCAA CGCCAGTGGG TTCGCGC CCTACTGGCG CTATTTTTTGGTGCC TERM 3279 2988611 - 2988629 + GF 86 -5.9 -5.17353 | overlap 2988600 2988613 CCAACGCCAGTGGGT TCGCGCC CTACT GGCGCTA TTTTTTGGTGCCTGT TERM 3280 2988613 - 2988627 + GF 79 -8.5 -4.2131 | overlap 2988600 2988611 AACGCCAGTGGGTTC GCGCC CTACT GGCGC TATTTTTTGGTGCCT lnt 2988537 - 2990123 + | apolipoprotein N-acyltransferase TERM 3281 2990342 - 2990354 + F 74 -4.1 -4.97666 | TAGTGCTTCCAGTCA CAGAT AAC GTCTG TTTTTCTCATCTGTT TERM 3282 2990396 - 2990416 + F 79 -11.2 -3.11178 | TCTATTTATACCTGA TAGCCCTG CACTC CAGGGCTA TATTCCGCTTAGTTC TERM 3283 2991026 - 2991010 - g 73 -5.1 -4.7416 | opp_overlap 2991013 GCAAAAGGTTAAAAA CAACGGT GTT ATCGTTG TGGGCCACCGTGAAT TERM 3284 2991331 - 2991320 - g 80 -4.4 -5.1675 | opp_overlap 2991321 2991322, overlap 2991322 TTACTCACCAAAAAA GACT CTGA AGTC AAAGACTTCAAAGAT TERM 3285 2991344 - 2991322 - g 91 -11.4 -4.2131 | opp_overlap 2991321 2991322, overlap 2991320 ACTCACCAAAAAAGA CTCTGAAGTC AAA GACTTCAAAG ATTTGGCAGGTAAAG YPDSF_2638 2990888 - 2991805 + | glutamate and aspartate transporter subunit TERM 3286 2991836 - 2991818 - f 77 -10.2 -3.07102 | overlap 2991815 TAACAATAATAATCA GGGCGGGT CAT ACCTGCCC TACCGATTGATGATG TERM 3287 2991896 - 2991870 - f 100 -15.2 -2.69468 | opp_overlap 2991870, overlap 2991867 TATTGGTAGACAGGA TGCGGGGTGG TCGTTCC CCACCCCGCA TTTTTTTGTCAACCC TERM 3288 2991870 - 2991896 + F 100 -15.2 -5.60993 | opp_overlap 2991870 2991867 TATTGGTAGACAGGA TGCGGGGTGG TCGTTCC CCACCCCGCA TTTTTTTGTCAACCC YPDSF_2639 2991979 - 2992719 + | glutamate/aspartate transport system permease YPDSF_2640 2992719 - 2993393 + | glutamate/aspartate transport system permease YPDSF_2641 2993393 - 2994118 + | glutamate/aspartate transport ATP-binding protein TERM 3289 2994123 - 2994154 + T 87 -5 -5.49579 | overlap 2994124 2994127 TCTTGCATTAATTCG TTCTCCTCCCCTGC GTTT GTAGGGGAGGTCAC TTTTATTTTTTATGA TERM 3290 2994124 - 2994153 + T 75 -8.5 -3.87307 | overlap 2994123 2994127 CTTGCATTAATTCGT TCTCCTCCCCTGC GTTT GTAGGGGAGGTCA CTTTTATTTTTTATG TERM 3291 2994127 - 2994150 + T 100 -14.6 -2.95933 | overlap 2994124 2994123 GCATTAATTCGTTCT CCTCCCCTGC GTTT GTAGGGGAGG TCACTTTTATTTTTT YPDSF_2642 2994734 - 2994252 - | hypothetical protein TERM 3292 2996920 - 2996903 - g 70 -3.4 -4.85599 | opp_overlap 2996907 GTCATGGTAGAAAAA TACGGC GCGGAT ACCGTA CGTCTGTTTATGATG leuS 2994995 - 2997577 + | leucyl-tRNA synthetase TERM 3293 2997619 - 2997653 + G 71 -6.3 -4.34402 | ATTCTGACGTTGTTG CTGGGGTTGGCGGTG CTGGT CACCGCTGGCTGCGG TTTTAATCTGCGGGG YPDSF_2644 2997592 - 2998215 + | LPS-assembly lipoprotein RplB TERM 3294 2998240 - 2998267 + G 77 -9 -3.98649 | opp_overlap 2998236, overlap 2998241 ACCCTGAACAACTTG TCGCGCAGCTCC ATGA GGGGCTACGCGC TTGTTATCTATTGTG TERM 3295 2998241 - 2998266 + G 78 -12.5 -2.98105 | opp_overlap 2998236, overlap 2998240 CCCTGAACAACTTGT CGCGCAGCTCC ATGA GGGGCTACGCG CTTGTTATCTATTGT holA 2998212 - 2999246 + | DNA polymerase III subunit delta nadD 2999236 - 2999898 + | nicotinic acid mononucleotide adenylyltransferase YPDSF_2647 3000122 - 3000439 + | hypothetical protein YPDSF_2648 3000443 - 3000913 + | SPOUT methyltransferase superfamily protein TERM 3296 3001374 - 3001361 - g 86 -8.1 -4.62471 | GCTAACTTTGAAAAA GAGCG CAAA CGCTC ACGTCGCTTTACCTC TERM 3297 3002070 - 3002044 - g 72 -3.6 -4.77036 | GGTTATCACCAAAAA CACCAGCCTG TTCGATC CTGGTTGGTG GCAACTGCCCGGTTC TERM 3298 3002693 - 3002716 + G 73 -8.9 -3.78022 | GTGGCAGAACACCTG CGCGACCAT AAGTTA ATGGTTGCG TTTGCTCCCTATGAG YPDSF_2649 3000995 - 3002890 + | penicillin-binding protein 2 TERM 3299 3003590 - 3003600 + G 70 -8.2 -3.76767 | overlap 3003588 3003589 ATCAATTCTGGTTGC GGCC TCC GGCC TGTTTGTGTTGTTCC YPDSF_2650 3003090 - 3004202 + | cell wall shape-determining protein YPDSF_2651 3004212 - 3005294 + | rare lipoprotein A TERM 3300 3005375 - 3005338 - f 100 -14.3 -5.14163 | opp_overlap 3005335 3005349 3005370 ACTGACTAATAAAAA TAACCGTAACCGCCTGT GCAA ACAGGGTGTTACGGTTA AAACTGTTTGGGTGA YPDSF_2652 3005697 - 3006899 + | D-alanyl-D-alanine carboxypeptidase fraction A TERM 3301 3007003 - 3007032 + F 72 -6.3 -4.3739 | opp_overlap 3007004, overlap 3007009 TATCTGGCGAACAGT ACGTCACTCCCGC TCCG GCGGGAGTTGTGA TTTTATAGCCGGATA TERM 3302 3007009 - 3007026 + F 100 -12.7 -3.72405 | opp_overlap 3007004, overlap 3007003 GCGAACAGTACGTCA CTCCCGC TCCG GCGGGAG TTGTGATTTTATAGC YPDSF_2653 3007097 - 3007360 + | hypothetical protein lipB 3007572 - 3008273 + | lipoyltransferase TERM 3303 3008439 - 3008427 - f 80 -6.3 -4.90013 | GAATTTAATGAAAAA TCTCA AGT TGAGA GATTCAGAACTGGAA YPDSF_2655 3008466 - 3009431 + | lipoyl synthase TERM 3304 3009465 - 3009447 - T 74 -9.6 -3.38046 | opp_overlap 3009447, overlap 3009432 3009445 3009448 GCGGTAGGCTAAAGA CTTCAGCC CAT GGCTGAAA TAACTTATTACACCT TERM 3305 3009464 - 3009448 - T 76 -10.9 -2.62613 | opp_overlap 3009447, overlap 3009432 3009447 3009445 CGGTAGGCTAAAGAC TTCAGCC CAT GGCTGAA ATAACTTATTACACC TERM 3306 3009503 - 3009523 + T 100 -11.9 -5.93809 | opp_overlap 3009503 GCAGCCACCAAAAAA CGGATTTCC ATT GGAGATCCG TTTTTTTTATCAGCC TERM 3307 3009523 - 3009503 - T 100 -9.7 -5.1675 | opp_overlap 3009503 GCAGCCACCAAAAAA CGGATTTCC ATT GGAGATCCG TTTTTTTTATCAGCC tatE 3009869 - 3009612 - | twin argininte translocase protein A YPDSF_2657 3010076 - 3009924 - | hypothetical protein YPDSF_2658 3010436 - 3010819 + | membrane protein TERM 3308 3011221 - 3011204 - T 100 -10.5 -5.28176 | opp_overlap 3011204 GCTACCCATAAAAAA CCCGCCC AGTA AGGCGGG TTTTTAAAGATATGG TERM 3309 3011204 - 3011221 + T 100 -9.8 -4.61231 | opp_overlap 3011204 GCTACCCATAAAAAA CCCGCC CAGTAA GGCGGG TTTTTAAAGATATGG cspE 3011451 - 3011242 - | cold shock protein CspE YPDSF_2660 3011718 - 3012209 + | hypothetical protein YPDSF_2661 3013156 - 3012539 - | LuxR family regulatory protein TERM 3310 3012947 - 3012926 - G 81 -5.7 -5.05505 | opp_overlap 3012926 3012945, overlap 3012931 ATCACAAATCAAAAA GACATCCGC TTCT GCGGGGGTC TTATCCAGACGTTTG TERM 3311 3013047 - 3013071 + g 91 -2.9 -5.78622 | overlap 3013049 TAGAATTTAATCTCT TTTTTAAATCC TAA GGATGTGAAGA TTTTTTTTACGATAG YPDSF_2662 3013690 - 3014544 + | hypothetical protein YPDSF_2663 3014621 - 3014908 + | hypothetical protein YPDSF_2664 3015120 - 3014926 - | hypothetical protein YPDSF_2665 3015563 - 3015850 + | hypothetical protein YPDSF_2666 3017656 - 3015866 - | ABC transport protein TERM 3312 3017304 - 3017282 - G 70 -10.6 -2.94695 | overlap 3017284 3017286 CTCAATAGATAATGA TAGACCGCCA GTC TGGCGCTCTA GGTGAAACCGCAAAC TERM 3313 3018153 - 3018142 - R 75 -3 -5.24551 | opp_overlap 3018142 TCAAACGAATAAAAA CAAA GAAA TTTG GTTATTTACAATGAA YPDSF_2667 3019041 - 3018226 - | hypothetical protein TERM 3314 3018911 - 3018887 - G 70 -9.9 -3.1944 | opp_overlap 3018906, overlap 3018879 ATCAAAACCAGGCAA CGCTCATCGGG AAC CGCGGTGAGCG TCAGTGGCTGCCCTT YPDSF_2668 3020109 - 3019051 - | hypothetical protein TERM 3315 3019257 - 3019268 + g 71 -5.8 -4.31329 | CACTCAACACCGCGT CCAG AAAA CTGG TTTTACGGTTTTTGA YPDSF_2669 3022094 - 3020124 - | carbohydrate kinase TERM 3316 3021752 - 3021765 + g 74 -3.7 -5.05601 | TACTCAGGAGTACCA GCGCC GTGA GCCGC TTTTTATCTGTGGTC YPDSF_2670 3023259 - 3022126 - | hypothetical protein YPDSF_2671 3024311 - 3023283 - | sugar transport system permease protein TERM 3317 3024232 - 3024221 - G 74 -2.2 -5.1244 | overlap 3024224 GCAGGAACATAAAAA TCAG GACG CCGA AGCGTTCAAAAAAAG YPDSF_2672 3025870 - 3024323 - | sugar transport ATP-binding protein YPDSF_2673 3026848 - 3025919 - | sugar-binding periplasmic protein TERM 3318 3026625 - 3026610 - G 70 -3.2 -4.84311 | gap 1, opp_overlap 3026618, overlap 3026611 GGCGAGACAATAAAA CCCTGCG CGC CAC-GGG TGATGGCATTTTCCA YPDSF_2674 3027483 - 3026974 - | myo-inositol 2-dehydrogenase YPDSF_2675 3027958 - 3027455 - | hypothetical protein YPDSF_2676 3028785 - 3028252 - | thiamine pyrophosphate-dependent protein YPDSF_2677 3031727 - 3028827 - | aldehyde dehydrogenase TERM 3319 3029099 - 3029075 - G 76 -12.9 -2.70932 | overlap 3029077 CTTTGGCCTCAATGA TATCGCCCTGC CAA GCAGTGCGATA ACCTGCCAGCCCTTC TERM 3320 3029097 - 3029077 - G 73 -11.1 -2.90075 | overlap 3029075 TTGGCCTCAATGATA TCGCCCTGC CAA GCAGTGCGA TAACCTGCCAGCCCT TERM 3321 3029355 - 3029337 - G 70 -11 -2.5655 | overlap 3029336 GCCAGTGACACCAAT TCCCCCCA AGT TGAGGGGA TGATCACTTGGCAGC YPDSF_2678 3032086 - 3032940 + | hypothetical protein TERM 3322 3034296 - 3034274 - f 77 -10.6 -3.14344 | TACTTGCTGTACCAA CGCCCTGAAA CGC TCTCAGGGCA TGACTCTGCCATAGC TERM 3323 3035887 - 3035869 - g 79 -11 -3.61894 | AATCTGCTGCAACAA TCAACGCC GCT GGCGCTGA CCCTCAATGAGGCCG TERM 3324 3036723 - 3036706 - g 71 -5.5 -4.56597 | opp_overlap 3036709, overlap 3036711 TTCCTGGTGGAAAAA GAAGGGG ATGT CTCCTTC CTGCCCACCCGAGCC YPDSF_2679 3034648 - 3040626 + | hypothetical protein TERM 3325 3040664 - 3040634 - f 83 -9 -4.23434 | gap 1, overlap 3040637 3040638 CAAAATAGCTGAAAA CAAC-GCGCCCCG CATCGC CGGGGCGCTATCG GATTTCAGCCGTAAC TERM 3326 3040660 - 3040637 - f 93 -10.9 -4.2142 | overlap 3040634 3040638 AATAGCTGAAAACAA CGCGCCCCG CATCGC CGGGGCGCT ATCGGATTTCAGCCG TERM 3327 3040659 - 3040638 - f 100 -14.4 -3.11767 | overlap 3040637 3040634 ATAGCTGAAAACAAC GCGCCCCG CATCGC CGGGGCGC TATCGGATTTCAGCC TERM 3328 3042371 - 3042392 + G 74 -7.2 -4.15114 | CAACAGCGCCTTTGT CGGTGCCG ATGCCG CCGCACCG TTATTCTTTAATATT YPDSF_2680 3040683 - 3043046 + | hypothetical protein TERM 3329 3043218 - 3043192 - T 95 -8.1 -5.16237 | gap 2 AAGGGGATCAAAAAA GCCCCAC-A-GGT CAC ACCATTGTGGGGC AGCAATCTCGCGTTT YPDSF_2681 3043504 - 3043259 - | DNA-binding protein TERM 3330 3043953 - 3043929 - H 73 -5.7 -4.44355 | opp_overlap 3043929, overlap 3043931 TAATTCTAAAAATAA GTTGAATGGCT CAT ACCCATTCAGC TCTGGTCATCTTCTT TERM 3331 3043966 - 3043978 + H 78 -4.1 -5.24551 | overlap 3043974 AGCTCTGGTCATCTT CTTCG TAA TGAAG TTTTTCTTCATTTAA TERM 3332 3044415 - 3044429 + G 100 -5.7 -5.76949 | CTATTTTTTCCTGTA CCGAT CCCAC ATCGG TTTTTTTTGGAAGTC YPDSF_2682 3044177 - 3044758 + | hypothetical protein YPDSF_2683 3044830 - 3045033 + | hypothetical protein TERM 3333 3045167 - 3045189 + T 71 -4.8 -4.58859 | TTTTCATGGAAGGTT GGGTTTGTAA TAT TTGCAGTCCC TTTATTGTTCTATTT YPDSF_2684 3046647 - 3046075 - | hypothetical protein TERM 3334 3046135 - 3046154 + g 73 -10.8 -3.25823 | opp_overlap 3046129 3046128 3046126 TATAAATATGTTCAA GCACACTT GAAA AAGTGTGC TTGATATCAGAAACG YPDSF_2685 3046922 - 3046671 - | hypothetical protein TERM 3335 3047926 - 3047948 + H 78 -9.8 -3.54926 | opp_overlap 3047930, overlap 3047924 GATAAACATAACGTT CAAACCGTCC CAA GGGCGGTGTG TCTCTTTTTACAATG TERM 3336 3048561 - 3048538 - g 82 -11.8 -3.53012 | gap 1, opp_overlap 3048529 3048537 3048548 CGGGTCTGGTCGAAA TCG-GCCCTTC CTG GAAGGGCACGA GTATCGTGCCGCTTC YPDSF_2686 3048009 - 3049925 + | putaive autotransporter protein TERM 3337 3050040 - 3050014 - f 84 -10.1 -3.82218 | gap 1, opp_overlap 3050023, overlap 3050015 3050030 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 3338 3050041 - 3050015 - f 72 -10.1 -2.88849 | gap 1, opp_overlap 3050023, overlap 3050014 3050030 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT TERM 3339 3050117 - 3050138 + F 91 -6.5 -5.56264 | opp_overlap 3050114, overlap 3050120 CTTTGTCAATAACCT CAGCCCCTC TTCT GAGGGGTTA TTTTTTCTATTTCAC TERM 3340 3050120 - 3050135 + F 100 -10.4 -4.8277 | opp_overlap 3050114, overlap 3050117 TGTCAATAACCTCAG CCCCTC TTCT GAGGGG TTATTTTTTCTATTT TERM 3341 3050191 - 3050179 - f 95 -3.4 -6.28631 | TAAATTAAAAAAAAA TGCT CAGTC AGCA AGATAATTTCCACAA YPDSF_2687 3050460 - 3050954 + | hypothetical protein TERM 3342 3051469 - 3051448 - T 84 -10.1 -3.74693 | TGCCACCGTATTAAA GGTGATCGC TCAG GCGGTCACC GAACTCGATAATAAA YPDSF_2689 3052651 - 3051443 - | transposase for the IS285 insertion element TERM 3343 3053638 - 3053649 + G 80 -3 -5.36441 | CGGTCTCTTTCTCAC TGTT CGAC AACA TTTTTTATCTCAACA YPDSF_2690 3053064 - 3055271 + | membrane protein YPDSF_2691 3055264 - 3055794 + | hypothetical protein TERM 3344 3055826 - 3055813 - f 82 -2.3 -5.72254 | overlap 3055818 TTAAACAATAAAAAA GAACC GTCT GGCCC CATGCCAACCCGTTA YPDSF_2692 3055953 - 3058334 + | beta-glucosidase YPDSF_2693 3060041 - 3058413 - | hypothetical protein TERM 3345 3059217 - 3059231 + g 70 -3.4 -4.8066 | AGCCCCCAGTAATAG CGGCGC ATC GGGCTG TTTTTGCATTGTCTT YPDSF_2694 3060320 - 3060198 - | hypothetical protein YPDSF_2695 3060493 - 3061344 + | aldo/keto reductase TERM 3346 3062205 - 3062183 - g 78 -6.2 -4.82901 | opp_overlap 3062166 TTGTTGGCACAAAAA CCTTGGATTG TGC CAATCCCCGG AACCACAAAACTGCA YPDSF_2696 3061370 - 3062359 + | aldo/keto reductase TERM 3347 3062388 - 3062413 + T 100 -13.4 -3.15544 | opp_overlap 3062383 3062382 TCGCTCAAATTTCAT CTGGCTTACG ATAATC CGTAAGCCAG TTAATCCGAATAACG YPDSF_2697 3063307 - 3062414 - | LysR family transcriptional regulator TERM 3348 3063379 - 3063397 + H 100 -13.2 -4.01078 | CCAGGGGGTAATCTG CTCTCCTG ATT CAGGAGAG TTTATGGTCACTTTT YPDSF_2698 3063401 - 3064423 + | transposase TERM 3349 3064504 - 3064490 - g 77 -11.4 -3.3506 | overlap 3064481 TGGAAAGCCTTATAA GCGCAG CGC CTGCGC TGTCACAACAGGCAG YPDSF_2699 3064423 - 3065202 + | transposase/IS protein TERM 3350 3065387 - 3065370 - T 86 -7.7 -4.61231 | gap 1, opp_overlap 3065370 3065370, overlap 3065372 TTAGACCCCCAAAAA CGGGAAGC CCT GCT-CCCG GTATTCGATTTCAGC YPDSF_2700 3066372 - 3065971 - | hypothetical protein TERM 3351 3066298 - 3066278 - G 79 -7.5 -4.58236 | TACAAAAGATTAAAA GCCAGCACC AGC GGTGGTAGC GTTAATAAGGCGAAA YPDSF_2701 3067673 - 3066354 - | dual specificity phosphatase YPDSF_2702 3069429 - 3067666 - | hypothetical protein TERM 3352 3069385 - 3069367 - G 74 -9.6 -3.64716 | opp_overlap 3069373, overlap 3069365 3069370 CCAGTGGCGAAAATA CAACGATG TTT CATCGCTG GCGGTGAACATGCCT YPDSF_2703 3070058 - 3069426 - | acyltransferase YPDSF_2704 3070997 - 3070068 - | phosphatidate cytidylyltransferase YPDSF_2705 3071592 - 3070990 - | CDP-alcohol phosphatidyltransferase TERM 3353 3073172 - 3073131 - g 70 -10.3 -2.91702 | opp_overlap 3073136, overlap 3073136 AACACGATAAAATAT TAAAATGGCCGGAAGTTAA TGAT TTAGCTTACGGCCATTTTT TATGGCTCCCTGAAT TERM 3354 3073136 - 3073167 + G 100 -12.4 -5.28176 | opp_overlap 3073131 3073136 GATAAAATATTAAAA TGGCCGGAAGTTAA TGAT TTAGCTTACGGCCA TTTTTTATGGCTCCC TERM 3355 3073167 - 3073136 - g 91 -10.2 -4.58236 | opp_overlap 3073136, overlap 3073131 GATAAAATATTAAAA TGGCCGGAAGTTAA TGAT TTAGCTTACGGCCA TTTTTTATGGCTCCC YPDSF_2707 3073094 - 3073741 + | hypothetical protein TERM 3356 3074509 - 3074525 + F 85 -7.2 -4.89567 | TAAATCACTACCTGA CCCGTC TAAAT GGCGGG TTTTGTATTTTAAGC YPDSF_2708 3074852 - 3075718 + | bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase YPDSF_2709 3075733 - 3075945 + | hypothetical protein TERM 3357 3075974 - 3075960 - T 83 -11.4 -3.02263 | opp_overlap 3075959 ATAGCCGTTGTAATA GCCAGC ATT GCTGGC CTATTGAACAATAAA TERM 3358 3076014 - 3075990 - T 100 -9.9 -4.46854 | opp_overlap 3075993, overlap 3075992 3075993 CTATTGAACAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCATATGCGCCTAT TERM 3359 3076012 - 3075992 - T 100 -12.5 -3.83566 | opp_overlap 3075993, overlap 3075990 3075993 ATTGAACAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 3360 3075993 - 3076011 + T 100 -16 -4.8048 | opp_overlap 3075992 3075990 3075993 TTGAACAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 3361 3076011 - 3075993 - T 100 -16 -2.89055 | opp_overlap 3075993, overlap 3075992 3075990 TTGAACAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC YPDSF_2710 3076550 - 3076092 - | transposase for the IS1541 insertion element TERM 3362 3076663 - 3076681 + r 100 -16 -4.36914 | opp_overlap 3076663 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 3363 3076681 - 3076663 - R 100 -16 -3.07307 | opp_overlap 3076663 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 3364 3076701 - 3076731 + r 100 -9.1 -5.56568 | gap 1, opp_overlap 3076701 3076703, overlap 3076703 CTGGGCACAAAAAAA TCGCGGTTACTGGT AAAC ACCAG-AACCGCAA TTTTTTTAGTACTAT TERM 3365 3076731 - 3076701 - R 100 -11.3 -5.60993 | gap 1, opp_overlap 3076701 3076703, overlap 3076703 CTGGGCACAAAAAAA TCGCGGTTACTGGT AAAC ACCAG-AACCGCAA TTTTTTTAGTACTAT TERM 3366 3076703 - 3076729 + r 83 -11.7 -2.94304 | gap 1, opp_overlap 3076703 3076701, overlap 3076701 GGGCACAAAAAAATC GCGGTTACTGGT AAAC ACCAG-AACCGC AATTTTTTTAGTACT TERM 3367 3076729 - 3076703 - R 83 -11.7 -2.96801 | gap 1, opp_overlap 3076701 3076703, overlap 3076701 GGGCACAAAAAAATC GCGGTTACTGGT AAAC ACCAG-AACCGC AATTTTTTTAGTACT cysS 3078282 - 3076897 - | cysteinyl-tRNA synthetase TERM 3368 3077309 - 3077321 + g 70 -10.5 -2.87931 | GCGTTAGCATCAGTA CCGCG CAG CGCGG TATATAAACGCTCCA TERM 3369 3077344 - 3077330 - G 71 -7.8 -4.03413 | AGCGCGGTATATAAA CGCTCC AGT GAAGCG CGTGCCTGCTTCAGA YPDSF_2712 3078493 - 3078987 + | peptidyl-prolyl cis-trans isomerase B (rotamase B) TERM 3370 3079043 - 3079059 + G 86 -9.4 -4.5538 | opp_overlap 3079043, overlap 3079037 CTCAGCGTTCAGGAA CCGGCA ATCAC TGCCGG TTTTCTGCATTTTAT TERM 3371 3079199 - 3079218 + G 71 -6.4 -4.36914 | opp_overlap 3079202, overlap 3079202 CTGAAATCACTCCAA CAACAGGG GGTG CCCTGTTA TTTTATCCACGGGAA TERM 3372 3079202 - 3079215 + G 79 -8.1 -4.30995 | opp_overlap 3079202, overlap 3079199 AAATCACTCCAACAA CAGGG GGTG CCCTG TTATTTTATCCACGG TERM 3373 3079215 - 3079202 - g 70 -8.1 -3.67134 | opp_overlap 3079202 3079199 AAATCACTCCAACAA CAGGG GGTG CCCTG TTATTTTATCCACGG YPDSF_2713 3078998 - 3079720 + | UDP-2,3-diacylglucosamine hydrolase YPDSF_2714 3080016 - 3080540 + | phosphoribosylaminoimidazole carboxylase catalytic subunit PurE YPDSF_2715 3080537 - 3081601 + | phosphoribosylaminoimidazole carboxylase ATPase subunit TERM 3374 3081632 - 3081608 - T 86 -9.9 -4.04491 | overlap 3081605 AAGTTATAACAAGAA GCGGGCGGC CTCTGCT GCTGCCCGC GAATAAAATCCACTA YPDSF_2716 3084074 - 3081645 - | permease TERM 3375 3083507 - 3083524 + g 76 -7.7 -4.38712 | gap 1 AAGTCAAACGGCTAC CCGGTTGC ACC GCA-CCGG TTTTCTCGACATCAG TERM 3376 3083852 - 3083829 - G 73 -10.2 -3.24422 | opp_overlap 3083846, overlap 3083827 3083826 CATGGTCAAAAATGA GAGTTGGCGG CTAA CCGCCAGCCC CTGCTGCTTCGCTTC YPDSF_2717 3084757 - 3084071 - | putative ABC transporter ATP-binding protein YbbA YPDSF_2718 3084725 - 3085363 + | multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1 TERM 3377 3085457 - 3085428 - fH 86 -5.7 -5.26316 | gap 1, opp_overlap 3085428, overlap 3085434 3085435 TCAGGCTAGAAAAAA GGGA-AAGCGCACT AAA AGTGCGGTAATCCC TTCGCTTACCAATCA TERM 3378 3085449 - 3085435 - fH 73 -10 -3.03344 | opp_overlap 3085428, overlap 3085434 3085428 AGAAAAAAGGGAAAG CGCACT AAA AGTGCG GTAATCCCTTCGCTT YPDSF_2719 3085750 - 3086526 + | short chain dehydrogenase TERM 3379 3086655 - 3086688 + G 70 -3.2 -4.8048 | opp_overlap 3086651 ACCTGCACCAAGCCA TAGAACAATCCATG TCAGTT CCTGTGTTGTTCTA TTTTTGGTCTGAACG TERM 3380 3086788 - 3086818 + G 71 -7.7 -4.07647 | gap 2 TCTGGCCCGTGTCGA TTGCGATGCACAACC CAT GGT-G-GCGTCGCAA TTTGGTTTACGCTCT YPDSF_2720 3086603 - 3087472 + | putative thioredoxin TERM 3381 3087523 - 3087545 + F 100 -13.4 -4.52703 | overlap 3087542 TACCATCATTTGCTA CTGCGCGGGG CAA TCCTGCGCAG TTTTATGCTGCTTTC YPDSF_2721 3087667 - 3088581 + | hypothetical protein YPDSF_2722 3088584 - 3089033 + | hypothetical protein TERM 3382 3089128 - 3089083 - T 100 -13.5 -3.80114 | opp_overlap 3089090, overlap 3089074 3089087 3089089 3089090 CAGCAAGGCAGTAAA CAAACAGCCCGAATCACTTAC TCTG GTAGGTGATTCGGGTTATTTA TCACGGCAGCGTATT TERM 3383 3089124 - 3089087 - T 100 -12.1 -4.5123 | opp_overlap 3089090, overlap 3089074 3089083 3089089 3089090 AAGGCAGTAAACAAA CAGCCCGAATCACTTAC TCTG GTAGGTGATTCGGGTTA TTTATCACGGCAGCG TERM 3384 3089122 - 3089089 - T 100 -12.5 -3.85603 | opp_overlap 3089090, overlap 3089074 3089087 3089083 3089090 GGCAGTAAACAAACA GCCCGAATCACTTAC TCTG GTAGGTGATTCGGGT TATTTATCACGGCAG TERM 3385 3089090 - 3089121 + T 100 -18.2 -4.06419 | opp_overlap 3089074 3089089 3089087 3089083 3089090 GCAGTAAACAAACAG CCCGAATCACTTAC TCTG GTAGGTGATTCGGG TTATTTATCACGGCA TERM 3386 3089121 - 3089090 - T 100 -16 -2.90639 | opp_overlap 3089090, overlap 3089074 3089089 3089087 3089083 GCAGTAAACAAACAG CCCGAATCACTTAC TCTG GTAGGTGATTCGGG TTATTTATCACGGCA YPDSF_2723 3089561 - 3089142 - | regulatory protein TERM 3387 3089423 - 3089392 - G 100 -13.8 -4.14739 | gap 1, opp_overlap 3089391 3089389 TCATCCAGTGTAAAA CCCAC-TTGCCGCGC CTG GCGCAGCAACGTGAG CTCTTCAATATGTTT TERM 3388 3089474 - 3089489 + g 100 -4.6 -6.13503 | opp_overlap 3089476, overlap 3089476 CGTTATCCGTGCGAA CAGGTG GCGT CACCAG TTTTTTTTCTTCATA TERM 3389 3089521 - 3089533 + g 91 -5.5 -5.40474 | AAACGAATGGCTTTG CTGGT TAA ACCGG TTTTTTTCGCAACAT TERM 3390 3090274 - 3090259 - g 71 -6.8 -4.15222 | opp_overlap 3090251, overlap 3090260 AGTTCCGGCAACAAA CGTGGC TTTA GCCACA AGTACGGTTTCTGAT TERM 3391 3090925 - 3090889 - g 70 -4.9 -4.59773 | overlap 3090890 3090891 GGTCAGCCTGAAAAA TGGCAGTGCGACCATGG ATA CCTTGGTCGCTCTGGGG ACAGGTGCGGCCTGG TERM 3392 3090923 - 3090891 - g 73 -11.9 -2.61004 | overlap 3090890 3090889 TCAGCCTGAAAAATG GCAGTGCGACCATGG ATA CCTTGGTCGCTCTGG GGACAGGTGCGGCCT TERM 3393 3091546 - 3091570 + G 75 -10.7 -3.45118 | overlap 3091548 ACCCCAGTTGGTCTA TACCCTGGTGG TGG CCACCACGGTG TTAATTATCGCCTGC TERM 3394 3091548 - 3091568 + G 76 -11.1 -3.29593 | overlap 3091546 CCCAGTTGGTCTATA CCCTGGTGG TGG CCACCACGG TGTTAATTATCGCCT YPDSF_2724 3089768 - 3092653 + | copper exporting ATPase TERM 3395 3092667 - 3092705 + F 100 -17.6 -2.5547 | opp_overlap 3092656, overlap 3092667 AAATGCTTTCAGTGA CCTCAATGGCGCACAATA TCG TTTTGTGCGCCATTGAGC GTTGATATCCAAAAT TERM 3396 3092667 - 3092706 + F 100 -17.4 -3.2614 | gap 1, opp_overlap 3092656, overlap 3092667 AAATGCTTTCAGTGA C-CTCAATGGCGCACAATA TCG TTTTGTGCGCCATTGAGCG TTGATATCCAAAATG YPDSF_2725 3093050 - 3093859 + | hypothetical protein TERM 3397 3093886 - 3093865 - f 100 -10.9 -5.87996 | CAATCAATAAAAAAA TGGCCGATA TCAC TACCGGCCA GTCAAAGAGGAATTT YPDSF_2726 3094114 - 3094602 + | hypothetical protein TERM 3398 3094683 - 3094669 - f 73 -7.2 -4.10437 | overlap 3094681 CTATGAAGGAAAGAA TGAGTT TAA AACTCA TCAGACTGCTGACAA TERM 3399 3094772 - 3094746 - f 84 -10.1 -3.82218 | gap 1, opp_overlap 3094755, overlap 3094747 3094762 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 3400 3094773 - 3094747 - f 72 -10.1 -2.88849 | gap 1, opp_overlap 3094755, overlap 3094746 3094762 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT YPDSF_2727 3094939 - 3095178 + | hypothetical protein YPDSF_2728 3095905 - 3095282 - | hypothetical protein YPDSF_2729 3096867 - 3095899 - | protein ushA precursor:UDP-sugar hydrolase; 5'-nucleotidase YPDSF_2730 3096937 - 3096680 - | 5'-nucleotidase/2' 3'-cyclic phosphodiesterase TERM 3401 3098010 - 3098025 + H 70 -2.6 -5.00196 | TCGGTACAAAGTGCC CAGATA CACC TATTTG TTTTCTTATTTGCGG TERM 3402 3099699 - 3099710 + G 82 -7.2 -4.68908 | opp_overlap 3099698 AGTTTGGCACAAATC GGCG AGTT CGCC TTTATTTTGGCTGGG YPDSF_2733 3098667 - 3100358 + | putative cation:proton antiport protein TERM 3403 3100435 - 3100401 - T 100 -13.6 -5.06816 | opp_overlap 3100403 3100404, overlap 3100404 ACTCTGTAATAAAAA CAATCAGGGCCAGCTT ACT ATGCTGGCCCTGACTT ATATCCCGCGTCTAC TERM 3404 3100403 - 3100433 + T 100 -14 -3.49102 | opp_overlap 3100401 3100404, overlap 3100404 TCTGTAATAAAAACA ATCAGGGCCAGCTT ACT ATGCTGGCCCTGAC TTATATCCCGCGTCT TERM 3405 3100432 - 3100404 - T 100 -17.5 -4.63592 | opp_overlap 3100403 3100404, overlap 3100401 CTGTAATAAAAACAA TCAGGGCCAGCTT ACT ATGCTGGCCCTGA CTTATATCCCGCGTC TERM 3406 3100404 - 3100432 + T 100 -17.5 -2.6914 | opp_overlap 3100404 3100401, overlap 3100403 CTGTAATAAAAACAA TCAGGGCCAGCTT ACT ATGCTGGCCCTGA CTTATATCCCGCGTC YPDSF_2734 3101759 - 3100455 - | inosine-guanosine kinase TERM 3407 3100903 - 3100892 - G 71 -7.2 -4.03413 | overlap 3100893 ATCCCGCCATATAAA GCCC GCTG GGGC CTGCGGTACATAACA TERM 3408 3101945 - 3101909 - R 74 -6.6 -4.39426 | gap 1, opp_overlap 3101914, overlap 3101914 TACAGGGTGATAAAA CAGAACGGCCAGATGAG AAAC CTCACCCAGCCGTTA-G ATAAATTCGTTTAAA TERM 3409 3101941 - 3101914 - R 100 -12 -4.02581 | opp_overlap 3101914, overlap 3101909 GGTGATAAAACAGAA CGGCCAGATGAG AAAC CTCACCCAGCCG TTAGATAAATTCGTT YPDSF_2735 3103114 - 3101963 - | ferric enterobactin transport protein FepE YPDSF_2736 3104535 - 3103162 - | phosphomannomutase YPDSF_2737 3105283 - 3104540 - | glycosyltransferase TERM 3410 3104853 - 3104832 - G 76 -4.4 -4.96848 | overlap 3104835 CGTTTCATATAAAAA GTAGGATG GGGAGG CATCCAAC CATACTTCATTTTTT TERM 3411 3104950 - 3104965 + g 70 -4.7 -4.60924 | opp_overlap 3104950 GTAAGTCACCATATA CAGCA TCACAT TGCTG TTTTTCAAAGGTTTC YPDSF_2738 3106692 - 3105286 - | mannose-1-phosphate guanylyltransferase YPDSF_2739 3107844 - 3106879 - | GDP-fucose synthetase YPDSF_2740 3108536 - 3107850 - | GDP-mannose 4,6-dehydratase YPDSF_2741 3108972 - 3108454 - | hypothetical protein YPDSF_2742 3110001 - 3108988 - | mannosyltransferase YPDSF_2743 3111470 - 3110250 - | hypothetical protein TERM 3412 3110592 - 3110580 - G 76 -6.3 -4.67755 | ATAGTCAGGGAAAAA TGCAA GCA TTGCA GAATTATTCAGTGCG TERM 3413 3111105 - 3111087 - G 76 -6 -4.63863 | opp_overlap 3111091, overlap 3111091 GTAATAGAAAAAGAA TATAGCAC TGG GTGCTGTA ATAGAAAATATGGGA YPDSF_2744 3112609 - 3111467 - | mannosyltransferase TERM 3414 3111529 - 3111519 - G 83 -5.4 -5.09762 | ATCGTAATATAAAAA GAAC CAG GTTC ATCATCAGTAATATA TERM 3415 3111614 - 3111626 + g 100 -4.9 -5.95286 | GGGGATTTTTAATTT TATAG CTT CTATA TTTTTTATTTTTACT YPDSF_2745 3113702 - 3112989 - | hypothetical protein YPDSF_2746 3114951 - 3113713 - | O-unit flippase TERM 3416 3113875 - 3113837 - G 100 -15.7 -4.2535 | overlap 3113825 ACACCATATTTAAAA TGGACTGATAACATTAT GGATA ATAATATTATCAGTCCA CCAGAAAATAACGAT YPDSF_2747 3116413 - 3115130 - | hypothetical protein TERM 3417 3115286 - 3115338 + g 84 -2 -5.64006 | gap 1, opp_overlap 3115281 TACTACATTACCCCA TGGGAGACGCTTGTGATGCAAGAAA ACAA TATCTT-CATCATTTGCAACTCCCA TTTTTTTCATTGCAT YPDSF_2748 3117271 - 3116414 - | paratose synthase TERM 3418 3117297 - 3117282 - R 100 -9 -5.58454 | opp_overlap 3117281 3117282 3117284 TTCATATTAAAAAAA GAGGCA GTGT TGCCTC CTTGCTCCTGTTAAA YPDSF_2749 3118621 - 3117308 - | putative CDP-4-keto-6-deoxy-D-glucose-3-dehydratase YPDSF_2750 3119631 - 3118639 - | CDP-glucose 4,6-dehydratase YPDSF_2751 3120501 - 3119716 - | glucose-1-phosphate cytidylyltransferase TERM 3419 3120511 - 3120526 + r 72 -6.2 -4.25256 | CTCCATTACGTATTA CTTTGA TCTC TCAAAG TTATTTTGATGGCAC YPDSF_2752 3121516 - 3120527 - | CDP-6-deoxy-delta-3,4-glucoseen reductase TERM 3420 3120952 - 3120938 - G 85 -7.8 -4.90266 | opp_overlap 3120938 TTCACGAACGAAAAA GGTCCC TTG AGGACC TTCAATTCGTAAAAG TERM 3421 3121596 - 3121584 - R 80 -2.7 -5.53288 | CTTAAGTCAAAAAAA TTCAG TGA CTAAA ATAGAAACAAAAAAG hemH 3123076 - 3122114 - | ferrochelatase TERM 3422 3123150 - 3123120 - R 100 -17 -3.59979 | opp_overlap 3123127, overlap 3123139 3123140 CCTTCTTACTTGAAA TAGCTAAGGCGGCC TTA AACCGCCTTAGCTA TAAGGCCATCCAGAA adk 3123810 - 3123166 - | adenylate kinase TERM 3423 3124024 - 3123996 - R 91 -6.8 -5.56673 | gap 1, opp_overlap 3123996 AGGTACAATAAAAAA CACCCTTG-GCAA TACG TTGAACAAGGGTG TTTTTTTATCGATTA TERM 3424 3123996 - 3124024 + r 100 -6.8 -5.66684 | gap 1, opp_overlap 3123996 AGGTACAATAAAAAA CACCCTTG-GCAA TACG TTGAACAAGGGTG TTTTTTTATCGATTA YPDSF_2755 3125911 - 3124037 - | heat shock protein 90 TERM 3425 3125713 - 3125682 - G 74 -9.6 -3.57792 | opp_overlap 3125680, overlap 3125709 TCACTCAGGGTTAAA GTACGTTTCTCTTT ATCA AAAGATAAACGCAC TCTCAGTTCGCCATC YPDSF_2756 3126088 - 3125930 - | hypothetical protein recR 3126708 - 3126103 - | recombination protein RecR TERM 3426 3126732 - 3126763 + r 73 -3.6 -4.98672 | CATCTTAAAGCCTGG TGGCAATTGCATCC CATT GGATACAGAGGCCA TTTTCTCTTTTTGCG YPDSF_2758 3127040 - 3126708 - | hypothetical protein TERM 3427 3126967 - 3126979 + g 76 -3.4 -5.17353 | TTGGCGACTTCTTCC TGCA TCTGC TGCA TTTTTTCCTGCATCT YPDSF_2759 3129072 - 3127096 - | DNA polymerase III subunits gamma and tau TERM 3428 3127597 - 3127623 + g 79 -7.3 -4.46675 | overlap 3127587 TTGATTTTTCGCGGT CCAGCGATAAG CTTCT TTTTTCGCTGG TTTCTTCTCTTCCGT TERM 3429 3127700 - 3127741 + g 100 -10 -5.58179 | overlap 3127669 3127706 AAACGCTCCAGTGCT GAGTTTGCCGGCCGCGCT TTTCCT GGCGCCGCCGGCTCATTC TTTTTTGTTGTGGTC TERM 3430 3127706 - 3127735 + g 86 -14.2 -3.2756 | overlap 3127700 TCCAGTGCTGAGTTT GCCGGCCGCGCT TTTCCT GGCGCCGCCGGC TCATTCTTTTTTGTT TERM 3431 3129578 - 3129564 - R 75 -5.7 -4.58424 | TATGACGATATAAAA CCAGA GTTTG TCTGG CTGGAATACCTTAAC YPDSF_2760 3130291 - 3129728 - | adenine phosphoribosyltransferase YPDSF_2761 3130910 - 3130530 - | hypothetical protein TERM 3432 3130958 - 3130943 - H 76 -7.6 -4.15222 | opp_overlap 3130942 ACTTTCGTCAAGAAA GCGTTA TCAT TAACGC ATGTAGTGCCGACCA TERM 3433 3131519 - 3131505 - g 74 -7.8 -4.21343 | TCCAAGACAGAGAAA GCCAAC TGG GTCGGC AGAGTTTGTTAGTTG YPDSF_2762 3131111 - 3131647 + | primosomal replication protein n'' YPDSF_2763 3131818 - 3131973 + | hypothetical protein YPDSF_2764 3135627 - 3132313 - | potassium efflux protein KefA YPDSF_2765 3136356 - 3136003 - | hypothetical protein YPDSF_2766 3137025 - 3136369 - | DNA-binding transcriptional repressor AcrR TERM 3434 3136912 - 3136884 - G 77 -9.5 -3.74747 | overlap 3136887 TGAAGTGCCAGTAAA TAGCGCCTCGGGT TAC ACCCGCAGCGATA GCAATATCGGTAAGA TERM 3435 3136909 - 3136887 - G 70 -11.2 -2.66873 | overlap 3136884 AGTGCCAGTAAATAG CGCCTCGGGT TAC ACCCGCAGCG ATAGCAATATCGGTA TERM 3436 3137199 - 3137181 - g 78 -6 -4.77438 | ATCTATGAGCAAAAA CAGAGG GGTAATG CCTCTG GCTGCAATTCTGGTA YPDSF_2767 3137170 - 3138357 + | multidrug efflux protein TERM 3437 3138500 - 3138461 - g 85 -12.3 -3.78775 | CTTGCGATCATGAAA TTACCAGTAGCGCAATA TCCGAC CATTGCGCCACCGGCAA TTACAATTGCCGCCA YPDSF_2768 3138374 - 3141526 + | multidrug efflux protein TERM 3438 3141574 - 3141559 - f 100 -11.8 -3.83998 | opp_overlap 3141559 TCATTTCATACTAAA GGCCGC GCAA GCGGCC TTTTTATTGCTGAGC TERM 3439 3141559 - 3141574 + F 100 -11.8 -5.1356 | opp_overlap 3141559 TCATTTCATACTAAA GGCCGC GCAA GCGGCC TTTTTATTGCTGAGC rpmE2 3141712 - 3141972 + | 50S ribosomal protein L31 type B rpmJ 3141988 - 3142131 + | 50S ribosomal protein L36 TERM 3440 3142252 - 3142224 - f 73 -7.4 -4.10161 | gap 1, opp_overlap 3142224 CATCAGTCCCCAAAA GGCCCTTTGTGCA CTAA CGC-CAACGGGCC TTTTTATTCATTTGC TERM 3441 3142224 - 3142252 + F 88 -6.7 -5.24551 | gap 1, opp_overlap 3142224 CATCAGTCCCCAAAA GGCCCTTTGTGC ACTAAC GC-CAACGGGCC TTTTTATTCATTTGC TERM 3442 3143191 - 3143181 - g 76 -5.4 -4.8048 | overlap 3143165 3143166 TCTTGAGATTAAAAA TCTC AAA GAGA ACCAGTATTCAATGA TERM 3443 3143209 - 3143225 + G 70 -8.1 -3.71745 | opp_overlap 3143207, overlap 3143208 CAGTATTCAATGACT TACCAAT ATA ATTGGTA TATTTTCAATGCTTG YPDSF_2771 3143005 - 3143358 + | hypothetical protein YPDSF_2772 3143517 - 3143885 + | hypothetical protein YPDSF_2773 3143934 - 3144137 + | hemolysin expression-modulating protein TERM 3444 3144473 - 3144457 - f 76 -6.6 -4.46652 | TAAATAAAAATCAAA CCATTC GTTCA GAATGG GAGGAATCTTATTTT TERM 3445 3144543 - 3144532 - f 79 -3 -5.27335 | TGCCGGAAATAAAAA TCTA CTGA TAGA GAGCGTTCACGACAA YPDSF_2774 3144959 - 3145414 + | 6-O-methylguanine DNA methyltransferase family protein YPDSF_2775 3146071 - 3145550 - | lipoprotein TERM 3446 3145906 - 3145920 + g 77 -11.4 -3.44146 | opp_overlap 3145902 3145900 GTTCACGAATATTCA CGGTCC CAT GGACCG TTGATTGTGCGACCG TERM 3447 3146492 - 3146476 - g 74 -6.5 -4.41616 | ATGCTGCGAAACAAA CCGTCCC CGC AGAACGG ACTGTTCACTCATTT YPDSF_2776 3146328 - 3147188 + | acyl-CoA thioesterase II TERM 3448 3147239 - 3147284 + T 72 -7.5 -4.04089 | opp_overlap 3147244 3147246 3147249 3147251, overlap 3147247 3147249 CAGTTGATGAATCAA TGAAATAGCACAGGGGCGATG TCAC CATCGCCCCTGTAGTTCATCA TTATTATGTATTTTT TERM 3449 3147279 - 3147244 - T 100 -12.6 -4.01419 | opp_overlap 3147239 3147247 3147249, overlap 3147246 3147249 3147251 GATGAATCAATGAAA TAGCACAGGGGCGATG TCAC CATCGCCCCTGTAGTT CATCATTATTATGTA TERM 3450 3147277 - 3147246 - T 100 -15.2 -3.59031 | opp_overlap 3147239 3147247 3147249, overlap 3147244 3147249 3147251 TGAATCAATGAAATA GCACAGGGGCGATG TCAC CATCGCCCCTGTAG TTCATCATTATTATG TERM 3451 3147247 - 3147277 + T 100 -16.3 -3.34242 | gap 1, opp_overlap 3147246 3147244 3147249 3147251, overlap 3147239 3147249 GAATCAATGAAATAG C-ACAGGGGCGATG TCAC CATCGCCCCTGTAG TTCATCATTATTATG TERM 3452 3147274 - 3147249 - T 100 -19.1 -2.906 | opp_overlap 3147247 3147239 3147249, overlap 3147246 3147244 3147251 ATCAATGAAATAGCA CAGGGGCGATG TCAC CATCGCCCCTG TAGTTCATCATTATT TERM 3453 3147249 - 3147274 + T 100 -19.1 -2.8293 | opp_overlap 3147249 3147246 3147244 3147251, overlap 3147247 3147239 ATCAATGAAATAGCA CAGGGGCGATG TCAC CATCGCCCCTG TAGTTCATCATTATT TERM 3454 3147272 - 3147251 - T 100 -15.9 -2.9955 | opp_overlap 3147249 3147247 3147239, overlap 3147249 3147246 3147244 CAATGAAATAGCACA GGGGCGATG TCAC CATCGCCCC TGTAGTTCATCATTA YPDSF_2777 3148737 - 3147448 - | ammonium transporter YPDSF_2778 3149115 - 3148777 - | nitrogen regulatory protein P-II 2 TERM 3455 3148909 - 3148934 + g 74 -4.1 -5.00138 | gap 1 AATCACTTCGTCTAA TTGATCATCGGC GAT GGCGAT-ATCAA TTTTTACTTTGGGTA TERM 3456 3149520 - 3149499 - R 100 -13.7 -4.22554 | TGAGTCAATAAATAA CGTGGGGCG ACAT CACCCCACG CGTGCTGCTTAACTC YPDSF_2779 3151352 - 3149529 - | putative multidrug transporter membrane\ATP-binding components TERM 3457 3149763 - 3149778 + g 73 -3.2 -5.0538 | opp_overlap 3149765 3149766, overlap 3149765 AAGGCGATGAGCAAT AACCAC CAGC GTGGTA TTTTTTCGAATCACC YPDSF_2780 3153111 - 3151345 - | putative multidrug transporter membrane\ATP-binding components TERM 3458 3151557 - 3151570 + g 74 -2.3 -5.12707 | CGGTACGCTGTTCGC CCCAC TCGC GTAGG TTTTTTAAAATTTCA TERM 3459 3152499 - 3152518 + g 82 -12.2 -3.61398 | opp_overlap 3152495 TCATGCGAATACTGG TCAGGCTC TCTT GAGCCTGA TTATTAAGCAAAGAA YPDSF_2781 3153674 - 3153213 - | transcription regulator AsnC TERM 3460 3154153 - 3154164 + G 73 -5.8 -4.43844 | opp_overlap 3154141, overlap 3154146 AATCACCTTCTACGG TGGC CGTT GCCA TTTTGTCGATCATGC YPDSF_2782 3153800 - 3154840 + | pyridoxal-phosphate dependent protein TERM 3461 3155000 - 3154964 - T 100 -10.3 -4.74013 | TTCAAAGAGATAAAA GCGGTTTGTCAGC TAGGCATGAAC ACTGACAAACCGC CTACGGAAGAAAAAA TERM 3462 3155032 - 3155017 - T 100 -6.1 -5.8187 | TACGGAAGAAAAAAA CCGGA TGGTTC TCCGG CTGGCTAATAGCTAT YPDSF_2783 3155873 - 3155052 - | haloacid dehalogenase-like hydrolase TERM 3463 3156921 - 3156910 - g 71 -5.8 -4.29326 | GGTAAATTCAACAAA TGGC AGTT GCCA GCATCCGGTTCGCAT TERM 3464 3157488 - 3157470 - g 74 -2.4 -5.19212 | overlap 3157471 ACCAGCAGCAAAAAA CGCTGA CCTTCAT TCAGCA GATAGAAAGCGCGCC YPDSF_2784 3155978 - 3157681 + | hypothetical protein YPDSF_2785 3157970 - 3158668 + | queuosine biosynthesis protein QueC YPDSF_2786 3159161 - 3158754 - | hypothetical protein TERM 3465 3159394 - 3159351 - R 83 -8.8 -4.08945 | gap 1, opp_overlap 3159382 3159383 ATTATGTTGGTAAAA GCCGCCAGACCAATACCTACC GAT GGCCAGCACC-GCCTGGCGGC TTGATTTACCAACTT YPDSF_2787 3159961 - 3159515 - | hypothetical protein TERM 3466 3159824 - 3159839 + g 74 -2.4 -5.07107 | overlap 3159810 3159826 AGCGCCGTTATCTGC GGCGCT ATTA GGCGAC TTTTTTGAGACTTTA TERM 3467 3160043 - 3160066 + r 100 -15.4 -4.68384 | opp_overlap 3160047, overlap 3160047 AGATCACAGATATGC GAAAGGTCGC CAAA GCGACCTTTC TTTTATTACATCGGT TERM 3468 3160062 - 3160047 - R 82 -10.4 -3.66139 | opp_overlap 3160043 3160047 CACAGATATGCGAAA GGTCGC CAAA GCGACC TTTCTTTTATTACAT TERM 3469 3160047 - 3160062 + r 100 -10.4 -4.88795 | opp_overlap 3160047, overlap 3160043 CACAGATATGCGAAA GGTCGC CAAA GCGACC TTTCTTTTATTACAT YPDSF_2788 3161987 - 3160101 - | peptidyl-prolyl cis-trans isomerase (rotamase D) TERM 3470 3160834 - 3160844 + g 74 -4.6 -4.81083 | opp_overlap 3160831 TGTAGCGCATAATAA GCGT CAA GCGC TTTTTCCTGCTTAAG TERM 3471 3162207 - 3162183 - R 100 -9.9 -4.50159 | opp_overlap 3162186, overlap 3162185 3162186 GCTAAGCGAAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCATATGCGCCTAT TERM 3472 3162205 - 3162185 - R 100 -12.5 -3.8535 | opp_overlap 3162186, overlap 3162183 3162186 TAAGCGAAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 3473 3162204 - 3162186 - R 100 -16 -2.90126 | opp_overlap 3162186, overlap 3162185 3162183 AAGCGAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 3474 3162186 - 3162204 + r 100 -16 -4.8048 | opp_overlap 3162186 3162185 3162183 AAGCGAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC YPDSF_2789 3162743 - 3162285 - | transposase for the IS1541 insertion element TERM 3475 3162856 - 3162874 + r 100 -16 -4.36914 | opp_overlap 3162856 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 3476 3162874 - 3162856 - R 100 -16 -3.07307 | opp_overlap 3162856 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 3477 3162914 - 3162895 - R 100 -10 -5.93809 | opp_overlap 3162895 3162894 3162908 TGGGCACAAAAAAAA GCGCATCA TAAA CGATGCGC CTTGTATCTTACCTT TERM 3478 3162895 - 3162914 + r 70 -9.3 -2.81609 | opp_overlap 3162895, overlap 3162894 3162908 TGGGCACAAAAAAAA GCGCATC ATAAAC GATGCGC CTTGTATCTTACCTT YPDSF_2790 3163271 - 3162999 - | transcriptional regulator HU subunit beta TERM 3479 3163455 - 3163428 - R 72 -6.3 -4.25873 | opp_overlap 3163428 GCGGCACAAAAAATA GCTGGCAAGCA GGATTT CACTTACCAGC ATTAGTTTTATCAAT YPDSF_2791 3165897 - 3163489 - | DNA-binding ATP-dependent protease La TERM 3480 3165391 - 3165401 + g 100 -5.4 -5.83226 | opp_overlap 3165383 CAGCGAAGCCAGCAC TTCC GGC GGAA TTTTTTTGTTCAGTT TERM 3481 3165986 - 3166004 + r 100 -13.2 -3.44527 | opp_overlap 3165986 GCGAGGAAAAAGAAA TGGGGGAT AAA ATCCCCCA TTGTCATACTAACTG TERM 3482 3166004 - 3165986 - R 100 -13.2 -4.91852 | opp_overlap 3165986 GCGAGGAAAAAGAAA TGGGGGAT AAA ATCCCCCA TTGTCATACTAACTG clpX 3167309 - 3166038 - | ATP-dependent protease ATP-binding subunit clpP 3168138 - 3167515 - | ATP-dependent Clp protease proteolytic subunit TERM 3483 3167966 - 3167953 - G 76 -6.7 -4.56597 | opp_overlap 3167953 CTCGGCTTCCAAAAA CAGCA TCTG TGCTG TGATTAGGTTAGCCA TERM 3484 3168545 - 3168520 - R 100 -11.1 -5.50723 | opp_overlap 3168520 TTACCAAAAGAAAAA GCCCGTGACCA ATAA TGGCGACGGGC TTAATCAATCAAAAT TERM 3485 3168582 - 3168560 - R 95 -9.2 -4.4959 | overlap 3168562 CTTAATCAATCAAAA TACTGAATGG GTC CCATCCAGCA TCATGCGCTGAAAAA TERM 3486 3168580 - 3168562 - R 81 -9.6 -3.85043 | overlap 3168560 TAATCAATCAAAATA CTGAATGG GTC CCATCCAG CATCATGCGCTGAAA tig 3169904 - 3168600 - | trigger factor TERM 3487 3170254 - 3170229 - R 91 -10.5 -4.12532 | opp_overlap 3170235, overlap 3170231 3170235 TCGCCTATACAGAAA CACAAACGGCC CTAG AGCCGTTTGTA AAATTCTCATCTACT TERM 3488 3170252 - 3170231 - R 84 -10.9 -3.65996 | opp_overlap 3170235, overlap 3170229 3170235 GCCTATACAGAAACA CAAACGGCC CTAG AGCCGTTTG TAAAATTCTCATCTA TERM 3489 3170248 - 3170235 - R 73 -5.9 -4.44187 | opp_overlap 3170235, overlap 3170231 3170229 ATACAGAAACACAAA CGGCC CTAG AGCCG TTTGTAAAATTCTCA YPDSF_2795 3170641 - 3170321 - | transcriptional regulator BolA YPDSF_2796 3170990 - 3171568 + | hypothetical protein TERM 3490 3171673 - 3171645 - f 73 -8.2 -3.65991 | gap 1, opp_overlap 3171643 AGTTGCTCAACAGAA TGCTCTGCC-CGA TACC TTGCGGCAGAGCA GGTAGATTTATTATG TERM 3491 3171892 - 3171910 + G 73 -5.9 -4.58395 | overlap 3171895 TTGGTCCCCGCTGAT GGACCGC TACAC GCCGTCC TTTTTAGGGCGTCGG TERM 3492 3172814 - 3172832 + G 73 -3 -4.91194 | overlap 3172816 GCCGGTTGGTTTGTA GAGGCC CATGGCT GGCCAC TTTTCTATTTATTCT ampG 3171686 - 3173164 + | muropeptide transporter TERM 3493 3173187 - 3173214 + F 86 -3.4 -5.59879 | CATAAGTGACATAAA GCCGGTGC TGTTCAGTTTGT GCACTGGC TTTTTTGTGTTTATC TERM 3494 3173302 - 3173316 + F 85 -2.1 -5.75342 | TAAATCACAACTTTT CATGT TTGTT GCATG TTTTTTTTAAAAAAA YPDSF_2798 3173456 - 3174223 + | hypothetical protein TERM 3495 3174270 - 3174235 - f 72 -7.1 -4.04295 | opp_overlap 3174235 3174236 3174238, overlap 3174238 CTAACTATAACTAAA TGATTCCGAGGTG-CCT ATTT AGGACACCTCGAAAT-A TATTTTAATTTACCT TERM 3496 3174238 - 3174268 + F 73 -9.1 -3.51998 | gap 1, opp_overlap 3174235 3174238, overlap 3174236 3174235 ACTATAACTAAATGA TTCCGAGGTG-CCT ATTT AGGACACCTCGAAA TATATTTTAATTTAC TERM 3497 3174268 - 3174238 - f 83 -11.3 -3.05266 | gap 1, opp_overlap 3174238 3174236 3174235, overlap 3174235 ACTATAACTAAATGA TTCCGAGGTG-CCT ATTT AGGACACCTCGAAA TATATTTTAATTTAC TERM 3498 3174465 - 3174450 - f 80 -9 -3.95674 | AAAATTGCCAAATAA GGTCAC ATCT GTGACC CCCTTAACATAAAGT TERM 3499 3175480 - 3175465 - g 74 -2.6 -5.09173 | gap 1, overlap 3175456 3175453 3175476 GAACATGCCAAAAAA TGGCCAT GAC AT-GCCA AAAGGCATGGATATG YPDSF_2799 3174593 - 3175549 + | cytochrome o ubiquinol oxidase subunit II TERM 3500 3176617 - 3176640 + G 71 -6 -4.32804 | TTGCCACGATGATCA TTTCCATCCC AACA GGGGTGAAAA TTTTCAATTGGTTGT YPDSF_2800 3175554 - 3177545 + | cytochrome O ubiquinol oxidase subunit I TERM 3501 3177598 - 3177558 - g 77 -12 -3.17714 | gap 2, overlap 3177564 3177568 TGAAACTCTGACTAA CCACAACGT-A-GCCCATGC AGA GCATGGGCATCACGATGCGG GAGCGACGAAAGTAT TERM 3502 3177592 - 3177564 - g 70 -9 -3.54029 | gap 2, overlap 3177558 3177568 TCTGACTAACCACAA CGT-A-GCCCATGC AGA GCATGGGCATCACG ATGCGGGAGCGACGA TERM 3503 3177586 - 3177568 - g 81 -14.6 -2.63614 | overlap 3177564 3177558 ACTAACCACAACGTA GCCCATGC AGA GCATGGGC ATCACGATGCGGGAG TERM 3504 3177836 - 3177823 - g 71 -6.7 -4.15854 | AAAGGGAGTGTAAAA CAGGT CAAT ACCTG GTTGGGCTTCACCTT YPDSF_2801 3177535 - 3178149 + | cytochrome o ubiquinol oxidase subunit III YPDSF_2802 3178149 - 3178481 + | cytochrome o ubiquinol oxidase subunit IV YPDSF_2803 3178495 - 3179382 + | protoheme IX farnesyltransferase TERM 3505 3179451 - 3179413 - f 100 -11 -4.48299 | opp_overlap 3179417, overlap 3179417 TGAGAGTGAAATAAA TCAAGTGGCTGGCAGGAA TCG CTCTTGCCAGCCACTTTG TATTTGTTCCCTGTT TERM 3506 3179447 - 3179417 - f 100 -16.2 -3.76486 | opp_overlap 3179417, overlap 3179413 AGTGAAATAAATCAA GTGGCTGGCAGGAA TCG CTCTTGCCAGCCAC TTTGTATTTGTTCCC TERM 3507 3179417 - 3179447 + F 100 -17.7 -4.46072 | opp_overlap 3179417 3179413 AGTGAAATAAATCAA GTGGCTGGCAGGA ATCGC TCTTGCCAGCCAC TTTGTATTTGTTCCC YPDSF_2804 3179866 - 3181230 + | transporter TERM 3508 3181289 - 3181260 - T 71 -8.5 -3.44622 | opp_overlap 3181260 TAGGGCCAGAATTAA GGGGCAAAGACAT GAAA AAGCCGTTGCCCC TTTAGTCGTTATACC YPDSF_2805 3181845 - 3181354 - | nucleotide-binding protein YPDSF_2806 3182077 - 3182988 + | 2-dehydropantoate 2-reductase TERM 3509 3183521 - 3183492 - gT 76 -7.9 -4.19974 | gap 1, opp_overlap 3183493, overlap 3183493 AAAAGGCGGAAGAAA TTGCCTGGCAGCTA GTG TTGCCGCCAGG-AA TTTATAATTATCGGG TERM 3510 3183521 - 3183493 - gT 72 -9.5 -3.109 | opp_overlap 3183493, overlap 3183492 AAAGGCGGAAGAAAT TGCCTGGCAGCTA GTG TTGCCGCCAGGAA TTTATAATTATCGGG TERM 3511 3183493 - 3183521 + GT 73 -7.3 -4.1021 | opp_overlap 3183492 3183493 AAAGGCGGAAGAAAT TGCCTGGCAGCTA GTG TTGCCGCCAGGAA TTTATAATTATCGGG YPDSF_2807 3182951 - 3183541 + | hypothetical protein YPDSF_2808 3185060 - 3183609 - | thiamine biosynthesis protein ThiI YPDSF_2809 3185328 - 3185158 - | hypothetical protein TERM 3512 3185456 - 3185438 - g 72 -8.2 -3.96148 | CCGCTTCACCAGAAA TCAAAGCC GCC AGCTTTGA AACATCACTCAGTGA YPDSF_2810 3185371 - 3185664 + | exodeoxyribonuclease VII small subunit TERM 3513 3186025 - 3186052 + G 78 -6.2 -4.90471 | gap 1 GGCCCACGCTATTTT GGCCGGTG-ATGC ACT GCAAACGCTGGCC TTTTCTATTTTGGCT YPDSF_2811 3185669 - 3186589 + | geranyltranstransferase YPDSF_2812 3186745 - 3188604 + | 1-deoxy-D-xylulose-5-phosphate synthase TERM 3514 3188709 - 3188677 - T 100 -11.3 -4.13973 | opp_overlap 3188684, overlap 3188681 3188683 3188684 AGATATCAGAAACAA TAAATATCCTCCGGC ATA GCCGGAGGTTTTTCA TATGCGCCTATAAGG TERM 3515 3188705 - 3188681 - T 100 -9.9 -4.63952 | opp_overlap 3188684, overlap 3188677 3188683 3188684 ATCAGAAACAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCATATGCGCCTAT TERM 3516 3188703 - 3188683 - T 100 -12.5 -3.91443 | opp_overlap 3188684, overlap 3188681 3188677 3188684 CAGAAACAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 3517 3188684 - 3188702 + T 100 -16 -4.8048 | opp_overlap 3188683 3188681 3188677 3188684 AGAAACAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 3518 3188702 - 3188684 - T 100 -16 -2.93239 | opp_overlap 3188684, overlap 3188683 3188681 3188677 AGAAACAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC YPDSF_2813 3189241 - 3188783 - | transposase for the IS1541 insertion element TERM 3519 3189353 - 3189371 + r 100 -16 -4.37092 | opp_overlap 3189336 3189353 TGAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAT TERM 3520 3189371 - 3189353 - R 100 -16 -3.06831 | opp_overlap 3189353, overlap 3189336 TGAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAT TERM 3521 3189415 - 3189386 - R 95 -12.3 -3.28712 | opp_overlap 3189390, overlap 3189390 GTTTTCTGGGCACAA TAAAGGCATAGCC CGTG GGTTATGCCTTTA CGTGATAGTCTCTCT TERM 3522 3189390 - 3189411 + r 84 -10.9 -3.6959 | opp_overlap 3189386 3189390 TCTGGGCACAATAAA GGCATAGCC CGTG GGTTATGCC TTTACGTGATAGTCT TERM 3523 3189411 - 3189390 - R 86 -8.7 -4.30719 | opp_overlap 3189390, overlap 3189386 TCTGGGCACAATAAA GGCATAGCC CGTG GGTTATGCC TTTACGTGATAGTCT YPDSF_2814 3189939 - 3189454 - | phosphatidylglycerophosphatase A YPDSF_2815 3190921 - 3189932 - | thiamine monophosphate kinase TERM 3524 3190950 - 3190984 + r 100 -21.8 -2.84059 | opp_overlap 3190952 3190956, overlap 3190952 3190956 AAATGTTAACTGATA TATAAATTAAGGCCGG ATA CCGGCCTTAATTTATA TCGTTAATGTATATC TERM 3525 3190982 - 3190952 - R 100 -20 -2.95091 | opp_overlap 3190952 3190950 3190956, overlap 3190956 ATGTTAACTGATATA TAAATTAAGGCCGG ATA CCGGCCTTAATTTA TATCGTTAATGTATA TERM 3526 3190952 - 3190982 + r 100 -20 -2.96235 | opp_overlap 3190952 3190956, overlap 3190950 3190956 ATGTTAACTGATATA TAAATTAAGGCCGG ATA CCGGCCTTAATTTA TATCGTTAATGTATA TERM 3527 3190978 - 3190956 - R 100 -16.4 -4.15061 | opp_overlap 3190952 3190950 3190956, overlap 3190952 TAACTGATATATAAA TTAAGGCCGG ATA CCGGCCTTAA TTTATATCGTTAATG TERM 3528 3190956 - 3190978 + r 100 -16.4 -4.14541 | opp_overlap 3190956 3190952, overlap 3190952 3190950 TAACTGATATATAAA TTAAGGCCGG ATA CCGGCCTTAA TTTATATCGTTAATG nusB 3191578 - 3191162 - | transcription antitermination protein NusB TERM 3529 3191416 - 3191376 - G 70 -3.3 -4.88918 | opp_overlap 3191388, overlap 3191378 TGACGGGAAAGAAAA GGTGCCATTAATGCATC CAGAGAT GCTGCATTAACCGCAAC CCCTGACAGCAATTC TERM 3530 3191488 - 3191504 + g 71 -5.1 -4.57569 | opp_overlap 3191491, overlap 3191491 ACAGGAACTGTAATT CAACATC AGC GATGTCG TTTTTAGACAACTGC ribH 3192069 - 3191599 - | riboflavin synthase subunit beta ribD 3193314 - 3192205 - | bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase YPDSF_2819 3193913 - 3193464 - | transcriptional regulator NrdR YPDSF_2820 3194577 - 3193984 - | membrane protein TERM 3531 3194121 - 3194135 + g 82 -8.6 -4.54608 | CTTTGATGCTCGCAT CCAGTA ATT TACTGG TTTCTGTTTCTTTTA TERM 3532 3194532 - 3194514 - G 79 -11.8 -3.26807 | opp_overlap 3194512, overlap 3194512 ATGATTTAAAAACCA CAGACTGA TTT TCAGTCTG ACTCTCTATCGTTCG YPDSF_2821 3195305 - 3194610 - | hypothetical protein TERM 3533 3195529 - 3195497 - R 100 -11.3 -4.43501 | opp_overlap 3195504, overlap 3195501 3195503 3195504 AATTTACTGATAAAA TAAATATCCTCCGGC ATA GCCGGAGGTTTTTCA TATGCGCCTATAAGG TERM 3534 3195525 - 3195501 - R 100 -9.9 -4.7878 | opp_overlap 3195504, overlap 3195497 3195503 3195504 TACTGATAAAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCATATGCGCCTAT TERM 3535 3195523 - 3195503 - R 100 -12.5 -3.99938 | opp_overlap 3195504, overlap 3195501 3195497 3195504 CTGATAAAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 3536 3195522 - 3195504 - R 100 -16 -2.98878 | opp_overlap 3195504, overlap 3195503 3195501 3195497 TGATAAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 3537 3195504 - 3195522 + r 100 -16 -4.8048 | opp_overlap 3195504 3195503 3195501 3195497 TGATAAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC YPDSF_2822 3196061 - 3195603 - | transposase for the IS1541 insertion element TERM 3538 3196174 - 3196192 + r 100 -16 -4.36914 | opp_overlap 3196174 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 3539 3196192 - 3196174 - R 100 -16 -3.07307 | opp_overlap 3196174 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 3540 3196208 - 3196236 + r 71 -8.9 -3.24924 | opp_overlap 3196211, overlap 3196206 3196210 3196211 TTTTCTGGGCACAAA AAACCCTGAAACT AAC AGTTTCAGGGCTA TCTTATACATCGAAC TERM 3541 3196210 - 3196234 + r 84 -11.5 -3.18945 | opp_overlap 3196211, overlap 3196208 3196206 3196211 TTCTGGGCACAAAAA ACCCTGAAACT AAC AGTTTCAGGGC TATCTTATACATCGA TERM 3542 3196211 - 3196233 + r 100 -15 -2.51045 | opp_overlap 3196211, overlap 3196210 3196208 3196206 TCTGGGCACAAAAAA CCCTGAAACT AAC AGTTTCAGGG CTATCTTATACATCG TERM 3543 3196233 - 3196211 - R 100 -15 -5.24129 | opp_overlap 3196211 3196210 3196208 3196206 TCTGGGCACAAAAAA CCCTGAAACT AAC AGTTTCAGGG CTATCTTATACATCG secF 3197236 - 3196268 - | preprotein translocase subunit SecF secD 3199094 - 3197247 - | preprotein translocase subunit SecD TERM 3544 3198955 - 3198985 + g 77 -10.5 -3.53091 | gap 1 TGGACCAGCGTTGTC TCACTGGCG-GCGA TTCC TCGCGCACCAGTGA TTTGAACAGCCGGAT yajC 3199457 - 3199122 - | preprotein translocase subunit YajC TERM 3545 3199383 - 3199401 + g 78 -9.6 -3.90112 | opp_overlap 3199373 TACTACCAGCATGAT CAGCATGG AGG TCATGCTG TTTCCTTGAGCCGGA tgt 3200693 - 3199569 - | queuine tRNA-ribosyltransferase TERM 3546 3200205 - 3200178 - G 73 -9.1 -3.74872 | gap 1, opp_overlap 3200172 ATTCAGCTCATCAAA GCGCTG-GCGGC TACGG GCAGCCCAGCGC AGTGACATTTCCATC TERM 3547 3200661 - 3200640 - G 70 -9.3 -3.57462 | opp_overlap 3200654 3200656, overlap 3200610 CACGCCACGCTCAAA CACCAGCCG ACCA CGGCGGGCG CGCCCATCCGTTTTT TERM 3548 3200656 - 3200671 + g 80 -2.4 -5.38249 | opp_overlap 3200640, overlap 3200654 ACCAGCCGACCACGG CGGGCG CGCC CATCCG TTTTTTGTAATTCGT TERM 3549 3200702 - 3200728 + r 81 -7.4 -4.68593 | ACTTCACATAACCTC CAGCATCAGA GAAACAG TCTGATGTTG TTTTTGCCTGATCAC queA 3201871 - 3200786 - | S-adenosylmethionine:tRNA ribosyltransferase-isomerase YPDSF_2828 3202032 - 3202640 + | hypothetical protein TERM 3550 3202797 - 3202787 - f 73 -5.4 -4.67641 | ACTGCAAAACTAAAA TCGT TTA ACGA TAGGCAAAAACTATC YPDSF_2829 3202919 - 3203521 + | alkyl hydroperoxide reductase subunit c TERM 3551 3203562 - 3203585 + F 100 -12.5 -5.44119 | opp_overlap 3203562 CTCGGGGGCTATCAA GCCAGTCAG TTCACT CTGACTGGC TTTTTTTCCCCTAGA TERM 3552 3203585 - 3203562 - f 93 -12.5 -3.14132 | opp_overlap 3203562 CTCGGGGGCTATCAA GCCAGTCAG TTCACT CTGACTGGC TTTTTTTCCCCTAGA YPDSF_2830 3203910 - 3204356 + | hypothetical protein YPDSF_2831 3204371 - 3205672 + | gamma-glutamyltranspeptidase TERM 3553 3205811 - 3205840 + T 95 -12.3 -3.35813 | opp_overlap 3205810 3205811 3205813 AGTATCTGAAAATAT TATCCCCTATCGA ACTA TTGATGGGGGATA TTCATTAGAGTGGAG YPDSF_2832 3206560 - 3205880 - | short chain dehydrogenase TERM 3554 3206678 - 3206643 - R 87 -4.7 -5.52986 | opp_overlap 3206643 3206647, overlap 3206647 ACTGGAGCAAAAAAA CAGCTCAGTTATCAC TGAATT GTTATCCCTGAGCTG CTCTAGTGAGTTATC YPDSF_2833 3208544 - 3206715 - | maltodextrin glucosidase TERM 3555 3208200 - 3208184 - G 80 -2.9 -5.26918 | overlap 3208185 AGATCTGATAAAAAA CTTGGTC CGC GACCCAA TCAGGCCCGCTATCG TERM 3556 3209063 - 3209037 - R 100 -6.5 -5.85244 | opp_overlap 3209037 AATTAAAAGAAAAAA GCCGGGACAGA TGAAC TGTACCCCGGC TTTGTATCGATTATC YPDSF_2834 3210496 - 3209105 - | putative proline-specific permease TERM 3557 3209697 - 3209680 - G 77 -11.3 -3.36492 | opp_overlap 3209673, overlap 3209684 GCTGGAAGGTCAGAA CGAACGG ACTA CCGTTCG TGCCCACTTGATTCC TERM 3558 3210547 - 3210527 - R 100 -11.1 -4.72272 | overlap 3210505 TTTTTTCAGCAAAAA GCCACGGAT ATT AACCGTGGC TAAAAATACTCTATT YPDSF_2835 3211891 - 3210572 - | branched-chain amino acid transport system II carrier protein YPDSF_2836 3213429 - 3212365 - | phosphate binding protein TERM 3559 3212607 - 3212625 + g 79 -11 -3.54307 | CAAAATCTTGCCCAC TCGCTGCC AAC GGCAGTGA TTTAACACCACTGTT phoR 3214770 - 3213451 - | phosphate regulon sensor protein TERM 3560 3213531 - 3213521 - G 78 -2.4 -5.29885 | AAGGTAAAAATAAAA CGGG TAC CCAG ACCAATTTCACTCAT TERM 3561 3214442 - 3214425 - G 76 -11.3 -3.25304 | overlap 3214415 3214437 3214438 AAATATTACCATCAA CCGTGGT GATA ACCACGG CATCAGGCAGTGACT TERM 3562 3214744 - 3214727 - G 71 -5.5 -4.45696 | GGCAAACAAAAAAGA GCCAGCT CTAA AGCCAGC GTTTTCCATGATAAG YPDSF_2838 3215484 - 3214795 - | phosphate regulon transcriptional regulatory protein YPDSF_2839 3215752 - 3216996 + | exonuclease subunit SbcD TERM 3563 3217368 - 3217352 - g 71 -6.5 -4.13767 | GGCCTTATGCGAAAA CGGCAAA ATC TTGGCCG ATAAGGTCCGCGATA TERM 3564 3218219 - 3218190 - g 82 -6.5 -4.81083 | overlap 3218183 3218209 CTGAATGAGCAAAAA CTATTGCAGAC CCATCAAC GCCTGCAACAG CTAGCAGACTATGCC YPDSF_2840 3216993 - 3220682 + | hypothetical protein YPDSF_2841 3222198 - 3221284 - | fructokinase TERM 3565 3222265 - 3222247 - H 88 -9.6 -4.25104 | TTCTCGCGATCAAAA TACCCTGC TAG GCAGGATA ACTGTGATCTGGATA TERM 3566 3222516 - 3222492 - H 84 -11.3 -3.14132 | CCCTGCGTTGATTAA CTCGCGCGCTC CAG GCGCGCCCGAG CCAAGGATAACACTA rdgC 3222531 - 3223442 + | recombination associated protein TERM 3567 3223654 - 3223624 - T 86 -11.9 -2.91086 | overlap 3223617 3223619 AAAGGATAGATGATA TGTCGCCCCCTCT GGCAT AGAGAGGGTGACA GACTCGCTAACTCAA YPDSF_2843 3223965 - 3223678 - | hypothetical protein aroL 3224979 - 3224455 - | shikimate kinase II TERM 3568 3225054 - 3225034 - R 75 -3.2 -5.21709 | opp_overlap 3225051 TTCGACATCAAAAAA CCGACC GTTATTATT GGCCGG TTGAACAGGTTTACT YPDSF_2845 3225783 - 3225226 - | putative methyltransferase YPDSF_2846 3227151 - 3226513 - | hypothetical protein TERM 3569 3226996 - 3227010 + gr 83 -2.8 -5.39721 | CAGCCCTTGTTGTAT CTCAAT ATT AGTGAG TTTTTTATCTGCTGC YPDSF_2847 3227302 - 3227099 - | hypothetical protein YPDSF_2848 3227534 - 3227280 - | hypothetical protein YPDSF_2849 3228481 - 3227732 - | hypothetical protein TERM 3570 3228320 - 3228286 - G 71 -5.8 -4.29325 | overlap 3228288 CACCAAGAGCCAAAA CATTTTCGTTTTCTAC ACT GCCGAAATCGAAAATA AACTGATTAGTCTCA TERM 3571 3228734 - 3228707 - R 100 -13.6 -5.78622 | gap 1, opp_overlap 3228707 3228731 TGATTTGAAAAAAAA GCGACAT-TGGCA AAT TGCCACATGTCGC TTTACTAGCGATTTT TERM 3572 3228707 - 3228734 + r 100 -13.6 -3.75863 | gap 1, opp_overlap 3228707, overlap 3228731 TGATTTGAAAAAAAA GCGACAT-TGGCA AAT TGCCACATGTCGC TTTACTAGCGATTTT TERM 3573 3228731 - 3228745 + r 78 -5.7 -4.7497 | opp_overlap 3228707, overlap 3228707 GCAAATTGCCACATG TCGCT TTACT AGCGA TTTTTAATCAATCAG proA 3230077 - 3228818 - | gamma-glutamyl phosphate reductase TERM 3574 3228999 - 3228982 - G 74 -7.7 -4.1891 | TCGCGTTAACATAAA CTGCCGA TGAA TCGACAG CGCGGACAAAATACT YPDSF_2851 3231190 - 3230087 - | gamma-glutamyl kinase TERM 3575 3231311 - 3231281 - R 78 -9.1 -3.83205 | AGGCTTGATACGAAA TCACCCCCTTTAT TGTGC AGAAAGGGGGTAA TGGGGACAGTTTATG YPDSF_2852 3231768 - 3231367 - | DNA-binding transcriptional regulator Crl frsA 3233075 - 3231828 - | fermentation/respiration switch protein TERM 3576 3233190 - 3233161 - R 100 -9.3 -4.69326 | overlap 3233166 ATACTGAAGAGAAAA TGAAACGTCCGGC AGGC ACCGGACGCTTAA AGAACAGTAAATTAT TERM 3577 3233185 - 3233166 - R 100 -11.4 -4.32571 | overlap 3233161 GAAGAGAAAATGAAA CGTCCGGC AGGC ACCGGACG CTTAAAGAACAGTAA YPDSF_2854 3233660 - 3233202 - | xanthine-guanine phosphoribosyltransferase TERM 3578 3234493 - 3234483 - H 77 -4.6 -4.9218 | TAGTGATTATAAAAA CCCA TTC CGGG CGGGAGGGATGCGCA TERM 3579 3234604 - 3234590 - g 78 -5.8 -4.88258 | overlap 3234600 AAAAGGATAATAAAA TGAAAT TAC ATTTCA ATGCACAACTACATC YPDSF_2855 3234589 - 3236193 + | carbohydrate-binding protein TERM 3580 3236207 - 3236229 + T 100 -13.6 -5.26875 | opp_overlap 3236188 AATCGTCTCTATCAG CGGGTATTAT TCT ATAATACCCG TTTTTTAATTCAGAA YPDSF_2856 3237564 - 3236653 - | LysR family transcriptional regulator TERM 3581 3236722 - 3236732 + g 78 -4 -5.13016 | opp_overlap 3236716 3236722, overlap 3236716 ATTATCACATAAATA GTAA GCG TTAC TTTTTACTTTTAATT TERM 3582 3237875 - 3237865 - H 70 -2.6 -4.9725 | opp_overlap 3237865 ATGCCGACACAAAAA TAAA GGA TTTA ATTCTTATTTTTCCG TERM 3583 3238756 - 3238742 - H 82 -2.1 -5.72053 | gap 1 GAATTAAATAAAAAA TG-GGC TACA GCCTCA AGTAAAAACCTCATT TERM 3584 3240777 - 3240756 - g 70 -2.2 -5.00616 | overlap 3240769 GGTTTGTTCAAAAAA CCCTATCC TAACAT GGACATGG TGTCGATTGGGCCAA YPDSF_2857 3239439 - 3240899 + | aminoacyl-histidine dipeptidase YPDSF_2858 3242071 - 3241013 - | DNA polymerase IV TERM 3585 3243173 - 3243159 - g 74 -4.2 -4.8543 | overlap 3243161 3243163 GAAGTTGTAGAAAAA TACACC TTG GGTGAA GGGCGTTCTAGCGCA YPDSF_2859 3242427 - 3243374 + | hypothetical protein TERM 3586 3243450 - 3243490 + T 100 -19.1 -3.32844 | opp_overlap 3243451 3243455, overlap 3243451 3243455 GACAATAATTGAGCA ACAAAGCCCCCGAACAATG ATG CGTCGTTCGGGGGCTTTGC TTGTCAGATAAAAAA TERM 3587 3243451 - 3243489 + T 100 -22.6 -2.59564 | opp_overlap 3243451 3243455, overlap 3243450 3243455 ACAATAATTGAGCAA CAAAGCCCCCGAACAATG ATG CGTCGTTCGGGGGCTTTG CTTGTCAGATAAAAA TERM 3588 3243489 - 3243451 - T 100 -22.6 -3.2557 | opp_overlap 3243451 3243450 3243455, overlap 3243455 ACAATAATTGAGCAA CAAAGCCCCCGAACAATG ATG CGTCGTTCGGGGGCTTTG CTTGTCAGATAAAAA TERM 3589 3243485 - 3243455 - T 100 -17.6 -4.26871 | opp_overlap 3243451 3243450 3243455, overlap 3243451 TAATTGAGCAACAAA GCCCCCGAACAATG ATG CGTCGTTCGGGGGC TTTGCTTGTCAGATA TERM 3590 3243455 - 3243485 + T 100 -17.6 -4.00124 | opp_overlap 3243455 3243451, overlap 3243451 3243450 TAATTGAGCAACAAA GCCCCCGAACAATG ATG CGTCGTTCGGGGGC TTTGCTTGTCAGATA YPDSF_2860 3243845 - 3243618 - | hypothetical protein YPDSF_2861 3244937 - 3243858 - | thiamine biosynthesis lipoprotein TERM 3591 3244220 - 3244238 + g 74 -4.4 -4.79683 | overlap 3244222 CCGCGACTGGCTTTT CAATGGCG ATA CGCCAAGG TTTATTTTCTCCATT YPDSF_2862 3246144 - 3244921 - | Na(+)-translocating NADH-quinone reductase subunit F YPDSF_2863 3246756 - 3246160 - | Na(+)-translocating NADH-quinone reductase subunit E YPDSF_2864 3247392 - 3246763 - | Na(+)-translocating NADH-quinone reductase subunit D TERM 3592 3247255 - 3247234 - G 79 -8.7 -4.27796 | overlap 3247235 GAAGAAACTCGAAAA CGCAGTCAC CAGC GTGACTGCC AGAGTCATCACTAAT TERM 3593 3247254 - 3247235 - G 77 -12.2 -3.15593 | overlap 3247234 AAGAAACTCGAAAAC GCAGTCAC CAGC GTGACTGC CAGAGTCATCACTAA YPDSF_2865 3248185 - 3247385 - | Na(+)-translocating NADH-quinone reductase subunit C YPDSF_2866 3249416 - 3248175 - | Na(+)-translocating NADH-quinone reductase subunit B YPDSF_2867 3250802 - 3249420 - | Na(+)-translocating NADH-quinone reductase subunit A TERM 3594 3250987 - 3251003 + G 74 -6.5 -4.28049 | opp_overlap 3250982 CATTACACAAGCAGG TCACCAG CTG CGGGTGA TTTTAGCATTTTCCG YPDSF_2868 3250865 - 3251044 + | hypothetical protein YPDSF_2869 3251259 - 3251999 + | hypothetical protein YPDSF_2870 3252737 - 3251964 - | hypothetical protein TERM 3595 3252010 - 3252031 + g 75 -8.7 -3.91084 | opp_overlap 3252010 AATAAAGCAAATTCA CCTGGTGCA ATTT TGTGCCAGG TTTCATTACCGGTCA gmhA 3253521 - 3252940 - | phosphoheptose isomerase fadE 3253761 - 3256208 + | acyl-CoA dehydrogenase TERM 3596 3256277 - 3256245 - T 100 -11.3 -4.47183 | opp_overlap 3256252, overlap 3256249 3256251 3256252 CAGTATCGAAATAAA TAAATATCCTCCGGC ATA GCCGGAGGTTTTTCA TATGCGCCTATAAGG TERM 3597 3256273 - 3256249 - T 100 -9.9 -4.7923 | opp_overlap 3256252, overlap 3256245 3256251 3256252 ATCGAAATAAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCATATGCGCCTAT TERM 3598 3256271 - 3256251 - T 100 -12.5 -3.99693 | opp_overlap 3256252, overlap 3256249 3256245 3256252 CGAAATAAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 3599 3256270 - 3256252 - T 100 -16 -2.98189 | opp_overlap 3256252, overlap 3256251 3256249 3256245 GAAATAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 3600 3256252 - 3256270 + T 100 -16 -4.8048 | opp_overlap 3256252 3256251 3256249 3256245 GAAATAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC YPDSF_2873 3256809 - 3256351 - | transposase for the IS1541 insertion element TERM 3601 3256922 - 3256940 + r 100 -16 -4.37092 | opp_overlap 3256922 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAT TERM 3602 3256940 - 3256922 - R 100 -16 -3.07307 | opp_overlap 3256922 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAT TERM 3603 3256959 - 3256984 + r 100 -9 -4.82128 | opp_overlap 3256959 3256963 TCTGGGCACAATCAA CCAAGCCTCC CATTAA GGAGGCTTAG TTTTATGTTTAATAA TERM 3604 3256984 - 3256959 - R 91 -11.9 -3.44146 | opp_overlap 3256959, overlap 3256963 TCTGGGCACAATCAA CCAAGCCTCCC ATTA AGGAGGCTTAG TTTTATGTTTAATAA TERM 3605 3256980 - 3256963 - R 73 -9.1 -3.48064 | opp_overlap 3256959, overlap 3256959 GGCACAATCAACCAA GCCTCCC ATTA AGGAGGC TTAGTTTTATGTTTA YPDSF_2874 3257837 - 3257091 - | hypothetical protein TERM 3606 3257589 - 3257573 - G 72 -10.1 -3.44284 | overlap 3257571 GCCCCATCAACAACA GGCGCAA ACC CTGCGCC CCGAGTAATCGCTGT TERM 3607 3257769 - 3257750 - G 71 -7.9 -4.08216 | TGATGTGCTGTAAAA TGCCGAT CGGGAT ATCGGCA ACCAAGCGATGAAGT YPDSF_2875 3259692 - 3257839 - | accessory processing protein TERM 3608 3259297 - 3259312 + g 70 -9 -3.62478 | TCGCTCGAATCGCAA TGGGTG CGAG CACCCA TTTCCGGCTTCATTA YPDSF_2876 3265579 - 3259847 - | adhesin TERM 3609 3263932 - 3263943 + g 76 -7.2 -4.33274 | overlap 3263931 3263940 ATGTCAGCGTCGCAT CGGC TCCC GCCG TTTTAGTGATATCGG YPDSF_2877 3267410 - 3265620 - | surface-exposed protein TERM 3610 3267631 - 3267595 - R 82 -2.4 -5.66989 | gap 1, overlap 3267612 TAAACACTAAAAAAA CCGTAAACTTA-GAC TAATTGCC GTCACAGGTTTACGG CAAACAGCAATTTGA TERM 3611 3268128 - 3268143 + r 73 -9 -3.41359 | overlap 3268126 TAGCTCGTAGGCTGA GCCTCA GGGA TGAGGC TATTAATTTTGAGGC TERM 3612 3268230 - 3268220 - R 100 -8.2 -4.8622 | overlap 3268221 GGCGTCAAGTAAAAA GGGG GAT CCCC GACGTCATTGGCGTT mtnK 3269539 - 3268316 - | methylthioribose kinase TERM 3613 3269051 - 3269065 + g 76 -2.7 -5.15969 | opp_overlap 3269052, overlap 3269052 TTCCGGGTTGGTATA ACGGC TCACC GCCGC TTTTTTCGCTTGCGC YPDSF_2879 3269735 - 3270775 + | initiation factor 2B alpha/beta/delta YPDSF_2880 3271360 - 3270818 - | methionine salvage pathway enzyme E-2/E-2' YPDSF_2881 3272122 - 3271433 - | 2,3-diketo-5-methylthio-1-phosphopentane phosphatase YPDSF_2882 3272787 - 3272119 - | hypothetical protein TERM 3614 3272717 - 3272728 + g 71 -7.2 -4.09685 | opp_overlap 3272705 TTACCGCCAGTCGCC GGGC ACCA GCCC TTTTCGCCGATCCAG YPDSF_2883 3272927 - 3274087 + | putative aminotransferase YPDSF_2884 3274075 - 3274845 + | hypothetical protein YPDSF_2885 3276601 - 3275318 - | allantoate amidohydrolase TERM 3615 3276105 - 3276123 + g 71 -11 -2.84504 | overlap 3276103 3276101 ATCGCTTGCGCGACA CTGATGCC ATC GGCATCGG TCGTATTTAACCACT YPDSF_2886 3277059 - 3276601 - | aminotransferase, class V TERM 3616 3277107 - 3277125 + H 100 -13.2 -4.01078 | CCAGGGGGTAATCTG CTCTCCTG ATT CAGGAGAG TTTATGGTCACTTTT YPDSF_2887 3277129 - 3278151 + | transposase for insertion sequence IS100 TERM 3617 3278232 - 3278218 - g 77 -11.4 -3.3506 | overlap 3278209 TGGAAAGCCTTATAA GCGCAG CGC CTGCGC TGTCACAACAGGCAG YPDSF_2888 3278151 - 3278930 + | transposase/IS protein YPDSF_2889 3279904 - 3278981 - | hypothetical protein YPDSF_2890 3280682 - 3279936 - | amino acid ABC transporter, ATP-binding protein YPDSF_2891 3281316 - 3280663 - | amino acid ABC transporter, permease protein YPDSF_2892 3281981 - 3281313 - | amino acid ABC transporter, permease protein YPDSF_2893 3282782 - 3281994 - | amino acid ABC transporter, periplasmic protein YPDSF_2894 3283943 - 3283110 - | transcriptional regulator TERM 3618 3283161 - 3283178 + g 73 -9.1 -3.80877 | overlap 3283159 AATTTGATGTATCCG CTGGCGG CCTT CTGCCAG TATTTTATGCAGTAA YPDSF_2895 3284284 - 3284126 - | hypothetical protein YPDSF_2896 3284253 - 3284456 + | hypothetical protein YPDSF_2897 3284453 - 3285850 + | amidase YPDSF_2898 3285895 - 3286362 + | hypothetical protein TERM 3619 3286497 - 3286481 - f 78 -9.3 -3.59979 | GGTTGTCATTCCAAA GGGGGCC TTT GGCCCTC GCTCGAAAATGCCTC TERM 3620 3287101 - 3287130 + G 86 -15.1 -2.91695 | overlap 3287078 3287073 3287099 CCATTTATTGGGTTG CCAGTGCCTTGAT GTTT ATCATGGCACTGG TCCTTTGGCGCTGCC YPDSF_2899 3286590 - 3287789 + | sugar transporter YPDSF_2900 3287949 - 3288722 + | amino acid transporter YPDSF_2901 3288719 - 3289060 + | hypothetical protein YPDSF_2902 3289232 - 3289744 + | transcriptional repressor MprA TERM 3621 3290199 - 3290179 - g 84 -2.6 -5.55769 | gap 1 CCGCAGAATAAAAAA CAGCA-ACG TAAA CGTGTACTG CTGTTGCTGACGGCC YPDSF_2903 3290128 - 3291300 + | multidrug resistance protein A YPDSF_2904 3291339 - 3292874 + | multidrug resistance protein B TERM 3622 3292962 - 3292906 - T 100 -13.8 -3.40775 | opp_overlap 3292907 3292916 3292921 3292960, overlap 3292907 3292921 ATTTTTAGCCAAATA GCGGTCAACAAAAAAGGGGGCCCTGA ACTCA TCAGCGCCCCCTTTTATTTTTACCGT TCTAAAACGTCTCTC TERM 3623 3292961 - 3292907 - T 100 -17.3 -2.64144 | opp_overlap 3292907 3292916 3292921 3292960, overlap 3292906 3292921 TTTTTAGCCAAATAG CGGTCAACAAAAAAGGGGGCCCTGA ACTCA TCAGCGCCCCCTTTTATTTTTACCG TTCTAAAACGTCTCT TERM 3624 3292907 - 3292961 + T 100 -17.3 -3.3095 | opp_overlap 3292907 3292906 3292921, overlap 3292916 3292921 3292960 TTTTTAGCCAAATAG CGGTCAACAAAAAAGGGGGCCCTGA ACTCA TCAGCGCCCCCTTTTATTTTTACCG TTCTAAAACGTCTCT TERM 3625 3292916 - 3292952 + T 100 -13.8 -4.6902 | opp_overlap 3292907 3292906 3292921, overlap 3292907 3292921 AAATAGCGGTCAACA AAAAAGGGGGCCCTGA ACTCA TCAGCGCCCCCTTTTA TTTTTACCGTTCTAA TERM 3626 3292921 - 3292947 + T 100 -13.7 -5.27023 | opp_overlap 3292907 3292906 3292921, overlap 3292916 3292907 GCGGTCAACAAAAAA GGGGGCCCTGA ACTCA TCAGCGCCCCC TTTTATTTTTACCGT TERM 3627 3292947 - 3292921 - T 100 -13.7 -5.4505 | opp_overlap 3292921 3292916 3292907, overlap 3292907 3292906 GCGGTCAACAAAAAA GGGGGCCCTGA ACTCA TCAGCGCCCCC TTTTATTTTTACCGT YPDSF_2905 3294163 - 3292997 - | putative methyltransferase TERM 3628 3294191 - 3294179 - H 77 -10.5 -3.14132 | opp_overlap 3294175 TGTCTTCTCCACCAA CGCGC AGG GCGCG AAGATTACCTGATGT YPDSF_2906 3294415 - 3294852 + | thioredoxin 2 TERM 3629 3294977 - 3295004 + F 75 -8.6 -3.86897 | gap 1, opp_overlap 3294948 3294947, overlap 3294972 3294978 TTTTCTGTCGGGGCG TGG-GCCATTCTA TAT TAGAATGGCGCTA TTTCTCAGGAGTCCG TERM 3630 3294978 - 3295002 + F 89 -11.5 -3.5241 | opp_overlap 3294948 3294947, overlap 3294972 3294977 TTTCTGTCGGGGCGT GGGCCATTCTA TAT TAGAATGGCGC TATTTCTCAGGAGTC YPDSF_2907 3295022 - 3295771 + | hypothetical protein YPDSF_2908 3295814 - 3298456 + | acetyltransferase pssA 3298632 - 3299987 + | phosphatidylserine synthase TERM 3631 3300019 - 3300003 - f 70 -3.6 -4.78848 | opp_overlap 3300003, overlap 3299996 GTCTTAAAGATAAAA CCCGGT GAATT AGCGGG TTTTCATCTCCCACT YPDSF_2910 3300049 - 3300390 + | hypothetical protein TERM 3632 3300562 - 3300542 - T 72 -6.1 -4.34402 | TCGCGCACAGCAAAA CCCCACG TTTTTGG CATGGGG TCATCATTACAACGC TERM 3633 3300628 - 3300608 - T 100 -10.4 -4.8048 | opp_overlap 3300608 CGCGCACAGCAAAAA CCCCACGC TTTGG GCATGGGG TTATCAATACAACGT TERM 3634 3300608 - 3300628 + T 71 -8.9 -3.35798 | opp_overlap 3300608 CGCGCACAGCAAAAA CCCCACGCT TTG GGCATGGGG TTATCAATACAACGT TERM 3635 3300694 - 3300674 - T 100 -10.4 -4.8048 | opp_overlap 3300671 CGCGCACAGCAAAAA CCCCACGC TTTTG GCATGGGG TCATCATTACAACGC TERM 3636 3300733 - 3300767 + T 95 -9.2 -4.50627 | opp_overlap 3300740 TGTGTTTCGCGCACA GCAAAAACCCCACGCT TTG GGCATGGGGTCTTGGC TTTATTTGATGCCTG TERM 3637 3300760 - 3300740 - T 100 -10.4 -4.8048 | opp_overlap 3300733 CGCGCACAGCAAAAA CCCCACGC TTTGG GCATGGGG TCTTGGCTTTATTTG TERM 3638 3300998 - 3300988 - T 74 -6.8 -4.27316 | opp_overlap 3300988 TCTCTCAATTCAAAA CACC TTC GGTG TTGTAAGGTTAAGCC TERM 3639 3302110 - 3302121 + T 74 -4.4 -5.06816 | CCACTTTCGTGTTTG CACA GTGC TGTG TTTTTATTAAACAGT TERM 3640 3302157 - 3302183 + T 70 -9.4 -2.75844 | opp_overlap 3302133 3302135, overlap 3302156 3302159 CCAGCTGGTATCTGC GACTGGCTTCAG CTC CAGGAGCTAGTC CTTTCACCTAACGCC TERM 3641 3302617 - 3302635 + T 82 -10.3 -3.57798 | overlap 3302610 CTTGGTCTTCCGGCG TGCGGGT TTTTC ACCCGCA TTATCGTTACTTATG TERM 3642 3304073 - 3304110 + T 78 -5.7 -4.7629 | opp_overlap 3304073 3304067 3304076, overlap 3304076 ATTGTTAAAGAGCAA TATCGTAAACACGACTT GGTA AAGTCATCTTTACGTTA TTTTTCAGTTCATAA TERM 3643 3304076 - 3304107 + T 78 -7.4 -4.47888 | opp_overlap 3304076 3304073 3304067, overlap 3304073 GTTAAAGAGCAATAT CGTAAACACGACTT GGTA AAGTCATCTTTACG TTATTTTTCAGTTCA TERM 3644 3306417 - 3306400 - T 100 -12.7 -5.80727 | AAAAACAACAAAAAA GGGGCGA TTTC TCGCCCC TTAGAGGATCAGCTA YPDSF_2911 3309006 - 3306433 - | protein disaggregation chaperone TERM 3645 3307700 - 3307713 + g 80 -2.3 -5.41143 | AACCGTTTTTTACTG GCGTC ATCT GACTC TTTTTTTAGGGCCTG YPDSF_2912 3309867 - 3309136 - | hypothetical protein TERM 3646 3309430 - 3309455 + g 71 -10.4 -3.06696 | opp_overlap 3309427 3309430 AGCCATAAGAGAGGA CGGTGCCGCA TTGAAT TGCGCCACCG TGTGTTCCAGAACAC TERM 3647 3309831 - 3309818 - G 70 -9.5 -3.29144 | CGAGTGGTGCTACAA GCCCG GACG CGGGC AGGCATCGGCCAATC rluD 3310846 - 3309869 - | 23S rRNA pseudouridine synthase D TERM 3648 3310881 - 3310891 + H 75 -8.2 -3.8766 | AACGTTGGGTTTTGA CGGC GAT GCCG TTTAATATAATGTGC YPDSF_2914 3310982 - 3311713 + | outer membrane protein assembly complex subunit YfiO TERM 3649 3311764 - 3311735 - f 74 -4.9 -4.77757 | opp_overlap 3311741, overlap 3311737 3311741 CCCGAAAAATGAAAA CACCAACGGCAGC TCAG GCTGCCGTTTTCA ATTTAGGTTTTCAAC TERM 3650 3311762 - 3311737 - f 72 -7.5 -3.99386 | opp_overlap 3311741, overlap 3311735 3311741 CGAAAAATGAAAACA CCAACGGCAGC TCAG GCTGCCGTTTT CAATTTAGGTTTTCA TERM 3651 3311741 - 3311758 + F 100 -12.7 -4.37198 | opp_overlap 3311737 3311735 3311741 AAATGAAAACACCAA CGGCAGC TCAG GCTGCCG TTTTCAATTTAGGTT TERM 3652 3311758 - 3311741 - f 100 -12.7 -3.58476 | opp_overlap 3311741, overlap 3311737 3311735 AAATGAAAACACCAA CGGCAGC TCAG GCTGCCG TTTTCAATTTAGGTT YPDSF_2915 3312068 - 3312430 + | sigma 54 modulation protein TERM 3653 3312459 - 3312474 + T 100 -11.8 -4.87291 | CTAATTTCGGTGTAA CGCGCC TTCG GGCGCG TTTTTAATTGACATC TERM 3654 3312688 - 3312656 - T 100 -11.3 -3.9344 | opp_overlap 3312663, overlap 3312660 3312662 3312663 AATGCGAAGACGAAA TAAATATCCTCCGGC ATA GCCGGAGGTTTTTCA TATGCGCCTATAAGG TERM 3655 3312684 - 3312660 - T 100 -9.9 -4.56883 | opp_overlap 3312663, overlap 3312656 3312662 3312663 CGAAGACGAAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCATATGCGCCTAT TERM 3656 3312682 - 3312662 - T 100 -12.5 -3.88114 | opp_overlap 3312663, overlap 3312660 3312656 3312663 AAGACGAAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 3657 3312663 - 3312681 + T 100 -16 -4.8048 | opp_overlap 3312662 3312660 3312656 3312663 AGACGAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 3658 3312681 - 3312663 - T 100 -16 -2.91241 | opp_overlap 3312663, overlap 3312662 3312660 3312656 AGACGAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC YPDSF_2916 3313220 - 3312762 - | transposase for the IS1541 insertion element TERM 3659 3313333 - 3313351 + H 100 -16 -4.36914 | opp_overlap 3313333 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAC TERM 3660 3313351 - 3313333 - H 100 -16 -3.07307 | opp_overlap 3313333 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAC TERM 3661 3313373 - 3313390 + H 100 -12.7 -5.77988 | opp_overlap 3313373 GGGCACAACAAGAAA GCCTCCC AAGC GGGAGGC TTTTTTTATGTATAT TERM 3662 3313390 - 3313373 - H 100 -12.7 -4.51812 | opp_overlap 3313373 GGGCACAACAAGAAA GCCTCCC AAGC GGGAGGC TTTTTTTATGTATAT pheA 3313503 - 3314660 + | bifunctional chorismate mutase/prephenate dehydratase TERM 3663 3314734 - 3314706 - T 100 -13.2 -5.69473 | CACACCATAAAAAAA GTCATCCCGGCA GGCTG TGCTGGGATGAC CTATAAAAATCTATC tyrA 3315886 - 3314765 - | bifunctional chorismate mutase/prephenate dehydrogenase TERM 3664 3314914 - 3314900 - G 74 -10 -3.61517 | ATGGTGCTCTAACAA GGTGAG CGC CTCACC AAAGCGTTTGTAGTA YPDSF_2919 3316114 - 3315899 - | 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (DAHP synthetase), tyrosine repressible YPDSF_2920 3316932 - 3316153 - | transposase/IS protein TERM 3665 3316851 - 3316865 + g 77 -11.4 -3.3506 | overlap 3316864 CTGCCTGTTGTGACA GCGCAG GCG CTGCGC TTATAAGGCTTTCCA YPDSF_2921 3317954 - 3316932 - | transposase TERM 3666 3317976 - 3317958 - H 100 -13.2 -4.01078 | AAAAGTGACCATAAA CTCTCCTG AAT CAGGAGAG CAGATTACCCCCTGG YPDSF_2922 3318064 - 3318522 + | transposase for the IS1541 insertion element TERM 3667 3318600 - 3318624 + T 88 -9.9 -4.15222 | opp_overlap 3318603, overlap 3318602 3318603 ATAGGCGCATATGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTAAAACACAT TERM 3668 3318602 - 3318622 + T 100 -12.5 -3.6761 | opp_overlap 3318603, overlap 3318600 3318603 AGGCGCATATGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTAAAACAC TERM 3669 3318621 - 3318603 - T 100 -16 -4.8048 | opp_overlap 3318602 3318600 3318603 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTAAAACA TERM 3670 3318603 - 3318621 + T 100 -16 -2.80244 | opp_overlap 3318603, overlap 3318602 3318600 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTAAAACA YPDSF_2923 3318918 - 3318712 - | zinc-binding protein TERM 3671 3318862 - 3318839 - G 76 -3.1 -5.06414 | CGCTTGCAACAAAAA GGGCGAAAA GGGCTT TGTTCACCC CAGATAACGACTTTT YPDSF_2924 3319856 - 3319104 - | hypothetical protein coaE 3320473 - 3319853 - | dephospho-CoA kinase YPDSF_2926 3320769 - 3321812 + | guanosine 5'-monophosphate oxidoreductase YPDSF_2927 3323343 - 3322207 - | type IV pilin biogenesis protein YPDSF_2928 3324959 - 3323403 - | hypothetical protein TERM 3672 3324678 - 3324657 - GR 71 -8.7 -3.28712 | opp_overlap 3324657 3324660, overlap 3324660 TCCCTTTTGGGATAA CAACGCGCT ATTT AGCCCGTTG TTAATACTACTGTTT TERM 3673 3324657 - 3324678 + gr 71 -8.7 -3.25304 | opp_overlap 3324657 3324660, overlap 3324660 TCCCTTTTGGGATAA CAACGCGCT ATTT AGCCCGTTG TTAATACTACTGTTT YPDSF_2929 3325398 - 3324934 - | putative major pilin subunit TERM 3674 3325428 - 3325440 + r 79 -3.3 -5.30155 | overlap 3325429 TGTTTAAGAAACTGG AGGCA GGG TGCCG TTTTTTAATTCATAC YPDSF_2930 3326548 - 3325601 - | quinolinate phosphoribosyltransferase YPDSF_2931 3326622 - 3327173 + | N-acetyl-anhydromuranmyl-L-alanine amidase TERM 3675 3327630 - 3327652 + G 74 -3.5 -4.94058 | overlap 3327632 3327646 GGTGCTGGTTTGGGG GATTTTGCA ATTAG TGCAAAATA TTTTGTTTGGCTTCC YPDSF_2932 3327463 - 3328317 + | regulatory protein AmpE TERM 3676 3328675 - 3328714 + T 100 -14.4 -3.06312 | gap 1, opp_overlap 3328680 CCATAGGTACTTTGT CAATAGCCTAGGCCAGCAC TAA GTGCTGGCCTAGG-TAGGG TTAACTAGCGGATTT TERM 3677 3328710 - 3328680 - T 100 -19.8 -3.02511 | opp_overlap 3328675 GGTACTTTGTCAATA GCCTAGGCCAGCAC TAA GTGCTGGCCTAGGT AGGGTTAACTAGCGG YPDSF_2933 3330147 - 3328750 - | aromatic amino acid transport protein TERM 3678 3329669 - 3329649 - G 74 -4.7 -4.88405 | opp_overlap 3329649 3329652, overlap 3329644 3329661 AACCGCCAAATAAAA TCATCGCAA TAA TCGCGATCA CTTTAATGATGGCAA TERM 3679 3329943 - 3329908 - G 70 -8.4 -3.72141 | gap 1, opp_overlap 3329921 ATATTTATACGCAAA GTGGCTAAAGGAACCGG CTA CAGGTTC-TTCAACCAC CATTTCGCCTAGCTG TERM 3680 3330691 - 3330727 + H 73 -8.3 -3.68836 | opp_overlap 3330713, overlap 3330692 TTTCTTTAGTTAAGT GTGAATTTAAATTCAAA AAA TATGAATTTAAATTCAA TTATTAAATGACTAT TERM 3681 3330692 - 3330726 + H 83 -11.8 -2.8082 | opp_overlap 3330713, overlap 3330691 TTCTTTAGTTAAGTG TGAATTTAAATTCAAA AAA TATGAATTTAAATTCA ATTATTAAATGACTA TERM 3682 3331049 - 3331072 + G 72 -9.6 -3.36273 | opp_overlap 3331053 CCCAAACTATCAGAT GTAATCGAGC AGCA GCTCGAATAC TTGATCTTGGAAGGG pdhR 3331010 - 3331774 + | transcriptional regulator PdhR aceE 3331970 - 3334633 + | pyruvate dehydrogenase subunit E1 TERM 3683 3334947 - 3334914 - g 100 -6.6 -5.25772 | gap 1 AAAGCAGAAGAAAAA CCGGCGGCGCCTGCT CAGGT AGC-GGCTCCGGCAG CCTCTGCGGCGAAAA YPDSF_2936 3334647 - 3336176 + | dihydrolipoamide acetyltransferase TERM 3684 3336181 - 3336205 + F 100 -17.2 -3.54743 | opp_overlap 3336177, overlap 3336160 3336168 3336184 TGGTGATGTAATCGC CAAGGCCGGC TTCGT GCCGGCCTTG TTGTGGTTACTGCTC TERM 3685 3336184 - 3336202 + F 100 -13.1 -3.90241 | opp_overlap 3336177, overlap 3336160 3336181 3336168 TGATGTAATCGCCAA GGCCGGC TTCGT GCCGGCC TTGTTGTGGTTACTG YPDSF_2937 3336194 - 3336355 + | hypothetical protein TERM 3686 3337393 - 3337403 + G 76 -5.4 -4.81551 | opp_overlap 3337383 3337393 GCAACTGCGCACCAA TGTG CCA CACA TTTTTGCTATCGGTG YPDSF_2938 3336482 - 3337906 + | dihydrolipoamide dehydrogenase TERM 3687 3337978 - 3337997 + F 100 -11.4 -5.93809 | opp_overlap 3337978 TAAATAAAAGTGAAA CGGTCCCT ACAT AGGGGCCG TTTTTTTTGTGCCCA TERM 3688 3337997 - 3337978 - f 83 -9.2 -4.02396 | opp_overlap 3337978 TAAATAAAAGTGAAA CGGTCCCT ACAT AGGGGCCG TTTTTTTTGTGCCCA TERM 3689 3338018 - 3338036 + F 100 -16 -3.07307 | opp_overlap 3338018 TTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC TERM 3690 3338036 - 3338018 - f 100 -16 -4.36914 | opp_overlap 3338018 TTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC YPDSF_2939 3338149 - 3338607 + | transposase for the IS1541 insertion element TERM 3691 3338681 - 3338713 + F 100 -11.3 -4.16943 | opp_overlap 3338688, overlap 3338685 3338687 3338688 CCTTATAGGCGCATA TGAAAAACCTCCGGC TAT GCCGGAGGATATTTA TTTTAGCCTATACGC TERM 3692 3338685 - 3338709 + F 100 -9.9 -4.67651 | opp_overlap 3338688, overlap 3338681 3338687 3338688 ATAGGCGCATATGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTTTAGCCTAT TERM 3693 3338687 - 3338707 + F 100 -12.5 -3.94471 | opp_overlap 3338688, overlap 3338685 3338681 3338688 AGGCGCATATGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTTTAGCCT TERM 3694 3338688 - 3338706 + F 100 -16 -2.95598 | opp_overlap 3338688, overlap 3338687 3338685 3338681 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTTAGCC TERM 3695 3338706 - 3338688 - f 100 -16 -4.8048 | opp_overlap 3338687 3338685 3338681 3338688 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTTAGCC TERM 3696 3339299 - 3339284 - g 100 -6.8 -5.2189 | overlap 3339286 TGAATCATTAAAAAA TCCGCC TGCG GGCGAA GAAGAATTCCTATTA TERM 3697 3339576 - 3339560 - g 70 -9.5 -3.30124 | GCTGATGTTCGATAA CTTCTAC GAC GTAGAAG ATAAAGCCAAAGCTG TERM 3698 3339593 - 3339582 - g 71 -5.8 -4.28188 | GACGTAGAAGATAAA GCCA AAGC TGGC AATCCGTATGCAAAA YPDSF_2940 3339255 - 3341774 + | bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase TERM 3699 3341827 - 3341847 + F 100 -16.1 -4.45168 | opp_overlap 3341827, overlap 3341845 TCGCATCAGCTAAAA CGGGGGGCC ATT GGCCTCCCG TTTCTATTTTAAAAA TERM 3700 3341847 - 3341827 - f 100 -13.9 -4.21194 | opp_overlap 3341827 3341845 TCGCATCAGCTAAAA CGGGGGGCC ATT GGCCTCCCG TTTCTATTTTAAAAA YPDSF_2941 3342073 - 3342432 + | hypothetical protein YPDSF_2942 3343451 - 3342543 - | hypothetical protein TERM 3701 3342693 - 3342716 + g 86 -5.2 -5.27477 | gap 1, opp_overlap 3342692 CGTGAAATAGGATAG GGCCGCGACCA GTG TGG-CGTTGCC TTTTTTCATTGCGCT TERM 3702 3342907 - 3342891 - G 82 -7.9 -4.7373 | opp_overlap 3342899 GCAGGCGATTAAAAA CAGTGGC AGC GCCCCTG GCCCTTGGCTATATA TERM 3703 3343815 - 3343836 + r 89 -10.2 -3.94746 | GACGAGCCGTTTTTA GGTGATCG CCTGAA CGATCACC TTTAATTCCGTATCA YPDSF_2943 3344683 - 3343889 - | S-adenosylmethionine decarboxylase YPDSF_2944 3345651 - 3344761 - | spermidine synthase TERM 3704 3345553 - 3345563 + g 73 -3.2 -5.00616 | opp_overlap 3345544 3345543 AAAAATCACCAGGTC CTGA TGC TCGG TTTTTTCGCGGAACA YPDSF_2945 3346115 - 3345768 - | hypothetical protein YPDSF_2946 3346432 - 3348033 + | multicopper oxidase TERM 3705 3348038 - 3348061 + F 100 -18.2 -5.24129 | TCAGCGCCTGAGCCA CACCCCGGTC GGTT GACCGGGGTG TTTTTTATAAAACCG YPDSF_2947 3348244 - 3348789 + | hypoxanthine phosphoribosyltransferase YPDSF_2948 3349818 - 3348943 - | carbonic anhydrase TERM 3706 3349072 - 3349086 + g 79 -7.8 -4.57341 | opp_overlap 3349061 AATACCATATACCCA GCCGTG GAT CATGGC TTTTTGCCCGCGCTT YPDSF_2949 3349841 - 3350767 + | ABC transporter, ATP-binding protein YPDSF_2950 3350764 - 3351534 + | ABC transporter, integral membrane protein TERM 3707 3352065 - 3352053 - g 100 -3.4 -6.04378 | AAAGCACAAAAAAAA CAAC GACAT GTTG GGCGATTTAAATAAG YPDSF_2951 3351741 - 3352079 + | hypothetical protein YPDSF_2952 3351976 - 3353055 + | hypothetical protein YPDSF_2953 3353584 - 3353204 - | aspartate alpha-decarboxylase TERM 3708 3353870 - 3353888 + r 78 -10.3 -3.2963 | GCTCATCGGCGGTCA CGGGTTC CGAGC GAACCCG TTATGGGGGAATGCT panC 3354849 - 3353995 - | pantoate--beta-alanine ligase TERM 3709 3354701 - 3354687 - G 76 -2.8 -5.1356 | opp_overlap 3354699, overlap 3354689 GCGGATTAACAAAAA TAGTCA CCA CGACCA CGTCAGCGCGGGTTT panB 3355734 - 3354937 - | 3-methyl-2-oxobutanoate hydroxymethyltransferase YPDSF_2956 3356482 - 3356003 - | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase pcnB 3357965 - 3356490 - | poly(A) polymerase I TERM 3710 3357054 - 3357092 + g 71 -6.7 -4.22948 | opp_overlap 3357056 AAAATTACGGGCAAT CAGTGGGAATAGCGGCT GGAAA AGCTGGTATTCGCACAG TTTTAAATAGGTTTT TERM 3711 3357922 - 3357943 + g 76 -5.7 -4.66537 | GGCACTTTATCTTTA CGGGCCTTG TCAT CACGGACCG TTTTGTCTTCGCGGA YPDSF_2958 3359208 - 3358054 - | glutamyl-Q tRNA(Asp) synthetase TERM 3712 3359229 - 3359271 + r 81 -10.7 -3.3676 | gap 1, opp_overlap 3359235, overlap 3359237 3359262 GAAGGGGTCCAACAG T-TCAAACACGGTGCCGGAG AGGG CTCTGGCACCGTGTTACACA TTATGCCGTGTTACA TERM 3713 3359264 - 3359235 - R 100 -17.9 -3.66803 | opp_overlap 3359229 3359237 3359262 GTCCAACAGTTCAAA CACGGTGCCGGAG AGGG CTCTGGCACCGTG TTACACATTATGCCG TERM 3714 3359237 - 3359262 + r 100 -16.9 -3.07233 | opp_overlap 3359235, overlap 3359229 CCAACAGTTCAAACA CGGTGCCGGAG AGGG CTCTGGCACCG TGTTACACATTATGC YPDSF_2959 3359771 - 3359316 - | DnaK transcriptional regulator DksA YPDSF_2960 3360801 - 3359941 - | sugar fermentation stimulation protein A TERM 3715 3360377 - 3360388 + g 91 -4.4 -5.53288 | opp_overlap 3360377 TTGTAACCAGATAAT TCAG CAAT CTGA TTTTTTTCAATTGCC YPDSF_2961 3361366 - 3360791 - | 2'-5' RNA ligase YPDSF_2962 3361458 - 3363947 + | ATP-dependent RNA helicase HrpB mrcB 3364056 - 3366530 + | penicillin-binding protein 1b TERM 3716 3366553 - 3366586 + F 100 -8.7 -5.95539 | overlap 3366554 3366555 GGTCAATAAAATGTG ACGGCGGGCGTGGTT TACA GACTGCGCCCGCCAA TTTTTTTCTTTGCGC TERM 3717 3366554 - 3366585 + F 100 -12.2 -4.15696 | overlap 3366553 3366555 GTCAATAAAATGTGA CGGCGGGCGTGGTT TACA GACTGCGCCCGCCA ATTTTTTTCTTTGCG TERM 3718 3366555 - 3366584 + F 100 -15.7 -3.07791 | overlap 3366554 3366553 TCAATAAAATGTGAC GGCGGGCGTGGTT TACA GACTGCGCCCGCC AATTTTTTTCTTTGC TERM 3719 3367612 - 3367634 + F 75 -3.2 -5.12172 | overlap 3367603 3367616 GGTATTTTACCGCAC CCGGCTGGCG GTG CGCCGGTAAG TTTTGTTTATTAATG TERM 3720 3367616 - 3367630 + F 71 -9.2 -2.91398 | overlap 3367603 3367612 TTTTACCGCACCCGG CTGGCG GTG CGCCGG TAAGTTTTGTTTATT YPDSF_2966 3367647 - 3368735 + | iron-hydroxamate transporter substrate-binding subunit TERM 3721 3370683 - 3370695 + G 76 -3.3 -5.20222 | TATTAGCGACATTTA TCGGG GCG CCCTA TTTTGTTTATTTGCT YPDSF_2967 3368732 - 3370729 + | iron-hydroxamate transporter permease subunit TERM 3722 3370850 - 3370833 - T 80 -9.9 -3.58343 | opp_overlap 3370827 3370826 GTCAGCAGTCTGAAA TCTCCTC CGGA GAGGAGA TTAGAGGTTATTGAC YPDSF_2968 3372383 - 3371103 - | glutamate-1-semialdehyde aminotransferase TERM 3723 3371355 - 3371322 - G 73 -9 -3.69934 | gap 2, opp_overlap 3371322 3371350 AAAGAATAGGCCAAA CATCCCACCGACGTGG TTAA CCAC--CAGTGGGATG TTCTCCTCTTTAGCG TERM 3724 3373310 - 3373329 + G 71 -11.4 -2.83522 | opp_overlap 3373302, overlap 3373309 TTAGCAACCGGTGCA GCCGCAGG GCTG TCTGCGGC ATTTAATGCCCCGCT TERM 3725 3373507 - 3373523 + G 70 -3 -4.78597 | ACTCAGTGATGCTCC GCTAAA CACCC TTTGGC TTTATTTATTATTAG TERM 3726 3373747 - 3373762 + G 71 -7.6 -4.0498 | GGCAGCCGGTAATTT CAGCAT CGGC ATGCTG TTGTTCATTTTTATC YPDSF_2969 3372764 - 3374200 + | chloride channel protein YPDSF_2970 3374336 - 3374680 + | iron-sulfur cluster insertion protein ErpA YPDSF_2971 3374836 - 3374735 - | hypothetical protein TERM 3727 3374943 - 3374920 - R 100 -8.8 -5.03715 | opp_overlap 3374920 AGCATCGCTAAAAAA CCGCGACCAT GAGA ATGGCAGCGG TTTTTTATGCTCAAA TERM 3728 3374920 - 3374943 + r 89 -6.6 -5.31275 | opp_overlap 3374920 AGCATCGCTAAAAAA CCGCGACCAT GAGA ATGGCAGCGG TTTTTTATGCTCAAA YPDSF_2972 3375596 - 3374982 - | hypothetical protein YPDSF_2973 3376438 - 3375596 - | vitamin B12-transporter protein BtuF YPDSF_2974 3377139 - 3376438 - | 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase dgt 3377433 - 3378953 + | deoxyguanosinetriphosphate triphosphohydrolase YPDSF_2976 3379151 - 3380596 + | serine endoprotease TERM 3729 3380694 - 3380718 + T 100 -9.3 -5.15526 | TTCCATCTAGCTCAA GGGCACAGT TTATCTC GCTGTGCCC TTTTTGGTTTTCTAT YPDSF_2977 3383547 - 3380755 - | hybrid sensory histidine kinase BarA YPDSF_2978 3383658 - 3383840 + | hypothetical protein YPDSF_2979 3383856 - 3383981 + | hypothetical protein TERM 3730 3385415 - 3385389 - g 73 -5 -4.68994 | ATTATCACTCAAAAA CAGCCAAACCCA AGC CGTGACTGGCTG AATCCTAACCTCGGT TERM 3731 3385840 - 3385858 + G 71 -6 -4.36914 | GTTGCCAGCCGATCC CCGGTGAT CAA ATTATCGG TTTTATCACGCAAGG relA 3383991 - 3386225 + | GDP/GTP pyrophosphokinase mazG 3386427 - 3387269 + | nucleoside triphosphate pyrophosphohydrolase YPDSF_2982 3387481 - 3389118 + | CTP synthetase TERM 3732 3389133 - 3389156 + F 95 -13.1 -3.01708 | AAATATTTGGTGGTA GGGGGCGGC TGAGAT GTCGCCCCC TCTGTCTGGAGTTTA eno 3389193 - 3390488 + | phosphopyruvate hydratase TERM 3733 3390579 - 3390554 - f 74 -10.5 -2.67166 | opp_overlap 3390560, overlap 3390560 AGTTAACTAATTAAT TAAAAACCCGC TTCG GCGGGTTTTTT TATGCGTTGATTTTG TERM 3734 3390560 - 3390573 + F 100 -9.5 -5.66684 | opp_overlap 3390554 3390560 CTAATTAATTAAAAA CCCGC TTCG GCGGG TTTTTTTATGCGTTG TERM 3735 3390573 - 3390560 - f 100 -9.5 -4.93547 | opp_overlap 3390560, overlap 3390554 CTAATTAATTAAAAA CCCGC TTCG GCGGG TTTTTTTATGCGTTG YPDSF_2984 3390860 - 3391465 + | superoxide dismutase (Cu-Zn) precursor TERM 3736 3391484 - 3391505 + F 82 -10.2 -3.72576 | opp_overlap 3391484 TCTGATACAGTTAAA CTGGCTAC CCGAGC GTAGCCAG TTTGGTGGAGGCCGG TERM 3737 3391505 - 3391484 - f 86 -10.2 -3.74077 | opp_overlap 3391484 TCTGATACAGTTAAA CTGGCTAC CCGAGC GTAGCCAG TTTGGTGGAGGCCGG TERM 3738 3391621 - 3391638 + G 83 -5.5 -5.13741 | AGGGCGAGGGTTATT TCACTGG CGTT CCAGCGA TTTTTGTTCGCTTGC YPDSF_2985 3391569 - 3392240 + | hypothetical protein YPDSF_2986 3392833 - 3392474 - | 6-pyruvoyl tetrahydrobiopterin synthase family protein TERM 3739 3394202 - 3394188 - g 71 -6.4 -4.431 | overlap 3394190 3394191 TATTGACGGACAAAA TATGCC ACT GGCACA GGCGCTGCTCAGTCA cysJ 3393226 - 3395064 + | sulfite reductase subunit alpha YPDSF_2988 3395064 - 3396794 + | sulfite reductase subunit beta YPDSF_2989 3396791 - 3397258 + | hypothetical protein YPDSF_2990 3397233 - 3397517 + | phosphoadenylyl-sulfate reductase (thioredoxin) TERM 3740 3397541 - 3397562 + T 78 -5.1 -5.01732 | gap 1, opp_overlap 3397541 3397543, overlap 3397543 TCTATGGCTCATTAA GA-GGGCGCT AAG ATCGCCCCTC TTTTTTACCGCGATT YPDSF_2991 3398052 - 3397576 - | hypothetical protein TERM 3741 3397955 - 3397937 - G 78 -9.6 -3.91984 | opp_overlap 3397937 ATATCGGGGAAATAA CCGTCGAA TCC TTCAACGG TTTTGAAGATGAAAA TERM 3742 3397937 - 3397955 + g 71 -7.4 -4.11216 | opp_overlap 3397937 ATATCGGGGAAATAA CCGTCGAA TCC TTCAACGG TTTTGAAGATGAAAA YPDSF_2992 3398358 - 3398158 - | hypothetical protein TERM 3743 3398376 - 3398404 + H 100 -15.5 -3.1085 | GAACCCCCTGGTGAG CTACTTGTGGGTA TCA TACCTACAAGTAG TATTGAGTCAATTAG TERM 3744 3398488 - 3398468 - H 93 -9.7 -4.37991 | opp_overlap 3398467 3398463 GAAAAACACGGAAAA GGGCGATCA TAA TGATCGTCC ATGCCTTGAATTTAT YPDSF_2993 3398949 - 3400367 + | siroheme synthase YPDSF_2994 3400378 - 3401286 + | sulfate adenylyltransferase subunit 2 cysN 3401298 - 3402815 + | sulfate adenylyltransferase subunit 1 YPDSF_2996 3402817 - 3403458 + | adenylylsulfate kinase YPDSF_2997 3403649 - 3403966 + | hypothetical protein ftsB 3404281 - 3404601 + | cell division protein FtsB ispD 3404605 - 3405330 + | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ispF 3405469 - 3405957 + | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase TERM 3745 3406216 - 3406202 - g 86 -11.4 -4.07885 | TATGCGGGGTTAAAA GACCGC CAT GCGGTC ACCGAACAGTGGTTT TERM 3746 3406933 - 3406948 + G 77 -10.4 -3.54129 | TGAGCTGAGTTTCTG GCTCCC TGCG GGGAGC TTTGCGACCAGTGTG truD 3405968 - 3407017 + | tRNA pseudouridine synthase D TERM 3747 3407401 - 3407416 + G 71 -6.8 -4.21631 | ATTACGATACGGCGG CGGCAG TGAC TTGCCG TTTATTACGTGCGTT surE 3406995 - 3407759 + | stationary phase survival protein SurE TERM 3748 3407830 - 3407816 - g 76 -11.4 -3.22298 | opp_overlap 3407801, overlap 3407801 GGTATTCACGATGAA CGCCTG TTA CAGGCG ATCGAAGCGGTACCG TERM 3749 3408330 - 3408345 + G 70 -3.2 -4.76075 | gap 1, overlap 3408330 3408328 3408327 AATACCATATTGAGA CGG-TGG AAG CCGTCCG TTTTGTTCCTCTGGT pcm 3407753 - 3408379 + | protein-L-isoaspartate O-methyltransferase TERM 3750 3409035 - 3409060 + G 76 -11.9 -3.01712 | opp_overlap 3409021 ATGTTGCCATCATCT GGTGCGGTTGT CGCT ACAACAGCACC TGTTACCGCACCAAG YPDSF_3004 3408483 - 3409484 + | lipoprotein NlpD YPDSF_3005 3409539 - 3410537 + | RNA polymerase sigma factor RpoS TERM 3751 3410640 - 3410667 + T 100 -7.1 -5.66684 | opp_overlap 3410640 GATGAAACACAACAA CGGTGAACA GATAGATAAA TGTTCACCG TTTTTTTATGCCTTG TERM 3752 3410667 - 3410640 - T 72 -7.1 -4.05193 | opp_overlap 3410640 GATGAAACACAACAA CGGTGAACA GATAGATAAA TGTTCACCG TTTTTTTATGCCTTG YPDSF_3006 3413420 - 3410865 - | DNA mismatch repair protein TERM 3753 3412384 - 3412402 + g 75 -8.8 -3.91897 | opp_overlap 3412382 ATACGTTCTAAATCG CCCACTTG TCT CAAGGGGG TTTGTAACTCGGCGG TERM 3754 3413976 - 3413958 - g 71 -6.6 -4.18351 | overlap 3413962 AAAGCAAATCAGAAA TGAAGGGC ACT GCCCCGCA TCTGAGCTGAAAGAT TERM 3755 3413972 - 3413962 - g 70 -8.2 -3.67022 | overlap 3413958 CAAATCAGAAATGAA GGGC ACT GCCC CGCATCTGAGCTGAA YPDSF_3007 3413917 - 3414051 + | hypothetical protein YPDSF_3008 3414669 - 3414214 - | ribose-5-phosphate isomerase B TERM 3756 3414802 - 3414826 + H 80 -10.1 -3.69364 | opp_overlap 3414797 3414807, overlap 3414806 TAAAACCAAGTCTTT CAAAAGATCAC CAT GTGATCATTTG TTATATATATTCAAT TERM 3757 3414806 - 3414822 + H 70 -5.1 -4.45484 | opp_overlap 3414797 3414807, overlap 3414802 ACCAAGTCTTTCAAA AGATCAC CAT GTGATCA TTTGTTATATATATT TERM 3758 3414821 - 3414807 - H 79 -8.6 -4.09739 | opp_overlap 3414806 3414802, overlap 3414797 CCAAGTCTTTCAAAA GATCAC CAT GTGATC ATTTGTTATATATAT YPDSF_3009 3415152 - 3416267 + | Zinc-binding dehydrogenase YPDSF_3010 3416331 - 3417101 + | short chain dehydrogenase TERM 3759 3417220 - 3417261 + G 91 -5.2 -5.52384 | CGATCCGGATCAGGT TGTGGAAGAGGCGATAAA AGGCTA TTTAGCGGCTTATCCACA TTTTTTTGCTAAAAC TERM 3760 3417400 - 3417445 + G 71 -5.3 -4.58685 | overlap 3417428 3417429 TAAAAATATGCTGGA TGCCGTAGCGGTTGGTGAG ATCTTCTC CTCCCCGGCGGCTGGGGCA TTTTTAGAAGCGTTT YPDSF_3011 3417188 - 3418189 + | dihydroxyacetone kinase YPDSF_3012 3418196 - 3418870 + | hypothetical protein YPDSF_3013 3419962 - 3418991 - | transcriptional regulatory protein TERM 3761 3419291 - 3419309 + g 73 -6 -4.4773 | AGGAGTGAACCAGCC CAGCTCTA CCA TATAGCTG TTTTCGTTCATATCA TERM 3762 3420154 - 3420168 + r 75 -2.2 -5.33131 | overlap 3420135 AATCAGTAACTGGTC TTTAAT TTT GTTAAA TTTGTTTTTTTATTA TERM 3763 3420403 - 3420379 - R 72 -6.3 -4.2558 | overlap 3420380 3420394 GATCCTTCATCAAAA TGCCAGGAGAG TAA CCCTACTGGCG GCAATGCTAATAGGC TERM 3764 3420402 - 3420380 - R 74 -9.8 -3.15027 | overlap 3420379 3420394 ATCCTTCATCAAAAT GCCAGGAGAG TAA CCCTACTGGC GGCAATGCTAATAGG YPDSF_3014 3421806 - 3420517 - | arsenical pump membrane protein TERM 3765 3421799 - 3421788 - G 70 -2.2 -4.9218 | TAGTCAGGATAAAAA TAGC ACCA GCCA ACAACATAACGCCTC YPDSF_3015 3422232 - 3421891 - | DNA-binding transcriptional repressor ArsR TERM 3766 3422974 - 3422995 + r 86 -3.1 -5.69068 | opp_overlap 3422978, overlap 3422978 AAGCTGTAAAGTCAT TAATTTCAT CTCA ATGAATTTA TTTTTTATCTTTTTA TERM 3767 3422978 - 3422991 + r 77 -3.9 -5.19003 | opp_overlap 3422978, overlap 3422974 TGTAAAGTCATTAAT TTCAT CTCA ATGAA TTTATTTTTTATCTT YPDSF_3016 3423159 - 3422953 - | hypothetical protein YPDSF_3017 3424344 - 3423580 - | extracellular solute-binding protein YPDSF_3018 3425794 - 3424415 - | cytochrome C peroxidase YPDSF_3019 3426336 - 3426031 - | hypothetical protein YPDSF_3020 3426455 - 3428551 + | hypothetical protein TERM 3768 3428784 - 3428762 - f 70 -7.7 -3.62255 | opp_overlap 3428761, overlap 3428758 TTCAAGAAGAACTAA CCGGCCTTT TATCC AAAGGCGGG CTGAATTGGAATTCA YPDSF_3021 3428984 - 3430171 + | hypothetical protein TERM 3769 3430358 - 3430326 - f 100 -13.6 -3.08073 | opp_overlap 3430335 3430337, overlap 3430336 AGCAGCGCTAATACA TCTGCAGAATGGAG GATAA CTTCATTCTGCAGA CAACCCCCGATGACG TERM 3770 3430434 - 3430410 - g 76 -7.8 -4.4261 | gap 1, opp_overlap 3430412, overlap 3430411 3430412 GGCCGAAGAGTAAAA CGTCCGCGCCA GAGA TGGCGCGG-CT TGAATGGCATTCAGG TERM 3771 3430433 - 3430411 - g 76 -11.3 -3.25084 | gap 1, opp_overlap 3430412, overlap 3430410 3430412 GCCGAAGAGTAAAAC GTCCGCGCCA GAGA TGGCGCGG-C TTGAATGGCATTCAG TERM 3772 3430412 - 3430433 + G 74 -11.5 -3.07994 | opp_overlap 3430411 3430410 3430412 CCGAAGAGTAAAACG TCCGCGCCA GAGA TGGCGCGGC TTGAATGGCATTCAG TERM 3773 3430433 - 3430412 - g 70 -11.5 -2.54568 | opp_overlap 3430412, overlap 3430411 3430410 CCGAAGAGTAAAACG TCCGCGCCA GAGA TGGCGCGGC TTGAATGGCATTCAG YPDSF_3022 3430334 - 3430555 + | acetyltransferase YPDSF_3025 3431596 - 3431345 - | hypothetical protein TERM 3774 3431710 - 3431679 - R 100 -10.2 -4.36595 | opp_overlap 3431679, overlap 3431707 CACTGAAACGGAAAA GGCCTGAGCTCC GTGAATGA AGAACTCAGGCC TTGATAGCCGCTTAA YPDSF_3026 3433422 - 3431779 - | fumarate hydratase, class I TERM 3775 3433055 - 3433071 + g 74 -3.6 -5.03715 | overlap 3433057 GCATCGTTACCCCCA GTCCAG ACCCG CTGGCC TTTTTTGCCCATGAT TERM 3776 3433665 - 3433688 + r 72 -9.6 -3.09823 | opp_overlap 3433661, overlap 3433659 GGCTTAAGCGACGGT TCCACCCTCT TTAT AAAGGGTGGA TCTCATTTTCCGCAC YPDSF_3027 3435316 - 3433820 - | L-xylulose kinase TERM 3777 3434566 - 3434550 - G 70 -8.7 -3.60151 | TCGTGTAAACCAGAA GTCAGTG CCG CACCGAC CACATCAAACATGCC YPDSF_3028 3436208 - 3435327 - | putative L-xylulose 5-phosphate 3-epimerase TERM 3778 3436161 - 3436175 + g 74 -4.2 -4.87807 | TTCGACCCAACTGGT GCCC GCAGGTA GGGC TTTTTCGTATATTCC TERM 3779 3436404 - 3436386 - R 72 -7.4 -4.0641 | opp_overlap 3436369 GTTTATCTACATAAA CAGTTAGC TGC GCTCACTG GAATCCCAATCACTT YPDSF_3029 3437451 - 3436414 - | sugar ABC transporter, permease protein YPDSF_3030 3438453 - 3437464 - | sugar ABC transporter, permease protein YPDSF_3031 3439960 - 3438446 - | sugar ABC transporter, ATP-binding protein TERM 3780 3439563 - 3439542 - G 71 -5.8 -4.3586 | GGATCGAGACTAAAA GCCAGTTC ATGCAA GATCTGGC AGGCTTTTTGTTTGA YPDSF_3032 3441116 - 3440109 - | sugar ABC transporter, periplasmic protein YPDSF_3033 3442083 - 3441274 - | DeoR family regulatory protein TERM 3781 3441923 - 3441945 + g 100 -4.9 -5.75342 | AGTGCGACAGCGCCG CCAAAACTG CGGAT CAGTTTTTG TTTTTTTTGCAACAC TERM 3782 3442737 - 3442715 - H 83 -11.4 -2.95116 | opp_overlap 3442715, overlap 3442712 3442717 CTATTAGTTAAATGA CATCATTCGA ATA CCGAATGATG TTTTTCATTATCGCC TERM 3783 3442715 - 3442737 + H 100 -10.7 -4.93365 | opp_overlap 3442715 3442712 3442717 CTATTAGTTAAATGA CATCATTCG AATAC CGAATGATG TTTTTCATTATCGCC araD 3442786 - 3443481 + | L-ribulose-5-phosphate 4-epimerase YPDSF_3035 3443944 - 3446394 + | anaerobic dimethyl sulfoxide reductase chain A YPDSF_3036 3446406 - 3447023 + | anaerobic dimethyl sulfoxide reductase chain B YPDSF_3037 3447025 - 3447885 + | anaerobic dimethyl sulfoxide reductase chain C TERM 3784 3447910 - 3447936 + F 100 -15.3 -3.85092 | GGCGGTGACACTTTG GCTATTCTGGG GAGCG CCCAGAATAGC TTTGCTCTGCCTCAT TERM 3785 3448124 - 3448136 + G 84 -2.6 -5.55769 | GGACTAACGGGGCGA GTGC TAGGT GCGC TTTTTTATTGTGAGC YPDSF_3038 3448031 - 3448741 + | twin-argninine leader-binding protein DmsD TERM 3786 3448964 - 3448945 - T 100 -13.6 -4.09685 | TTGCATTCTTTAAAA TGTCCCGC AAAC GCGGGACA AAGAGAAACGGAACA YPDSF_3039 3449528 - 3448998 - | cytochrome b561 TERM 3787 3449556 - 3449597 + r 76 -11 -2.56571 | gap 1, overlap 3449552 3449564 AATATACCCGTCGCC CTTCACGATGCAGG-GGGT TAGCT GCCTACCTGCATCTTGAAG TCACTTGGGTATATA YPDSF_3040 3450059 - 3449676 - | cytochrome B562 TERM 3788 3450093 - 3450139 + r 82 -6.9 -4.77122 | gap 2, opp_overlap 3450101 3450105, overlap 3450096 3450097 3450101 3450105 TTATGATTTTCTTCT CTTA-TAAATAGAGGGG-GGA AGATAAA TCCTCCCCTCTATTTAGTTAG TTATTTTTTATATCA TERM 3789 3450096 - 3450135 + r 78 -8.8 -3.81144 | gap 1, opp_overlap 3450101 3450105, overlap 3450093 3450097 3450101 3450105 TGATTTTCTTCTCTT ATAAATAGAGGGG-GGA AGATAAA TCCTCCCCTCTATTTAG TTAGTTATTTTTTAT TERM 3790 3450097 - 3450134 + r 89 -12.3 -2.86246 | gap 1, opp_overlap 3450101 3450105, overlap 3450096 3450093 3450101 3450105 GATTTTCTTCTCTTA TAAATAGAGGGG-GGA AGATAAA TCCTCCCCTCTATTTA GTTAGTTATTTTTTA TERM 3791 3450130 - 3450101 - R 78 -8.7 -3.85698 | gap 1, opp_overlap 3450097 3450096 3450093 3450101 3450105, overlap 3450105 TTCTTCTCTTATAAA TAGAGGGG-GGA AGATAAA TCCTCCCCTCTA TTTAGTTAGTTATTT TERM 3792 3450101 - 3450130 + r 80 -8.7 -4.05045 | gap 1, opp_overlap 3450101 3450105, overlap 3450097 3450096 3450093 3450105 TTCTTCTCTTATAAA TAGAGGGG-GGA AGATAAA TCCTCCCCTCTA TTTAGTTAGTTATTT TERM 3793 3450128 - 3450105 - R 71 -8.8 -3.3353 | opp_overlap 3450101 3450097 3450096 3450093 3450105, overlap 3450101 TCTCTTATAAATAGA GGGGGGAAGA TAAA TCCTCCCCTC TATTTAGTTAGTTAT TERM 3794 3450105 - 3450128 + r 75 -8.8 -3.59634 | opp_overlap 3450105 3450101, overlap 3450101 3450097 3450096 3450093 TCTCTTATAAATAGA GGGGGGAAGA TAAA TCCTCCCCTC TATTTAGTTAGTTAT YPDSF_3041 3452349 - 3450136 - | catalase-peroxidase TERM 3795 3450847 - 3450858 + g 76 -4.4 -4.91109 | CTCTGCGGGATCGTT GACT GGCC AGTC TTTTTGTGGTGCCAG TERM 3796 3453583 - 3453572 - g 74 -7.2 -4.2679 | GAAGCCGCATTAAAA GCGG CGGG CCGC AATGATGTGGTGGTG TERM 3797 3453741 - 3453729 - g 79 -9.1 -4.15833 | ATCAGTATCTGAAAA CCGGT AAA ACCGG TCTGGAAGAGAAACA YPDSF_3042 3452885 - 3453826 + | sugar ABC transporter, periplasmic protein TERM 3798 3453883 - 3453904 + F 89 -11.5 -3.53761 | opp_overlap 3453886, overlap 3453884 3453886 3453898 3453899 CCGCTTTAGCCGTAA TGAGGGGCG ACAT CGCCCCTCC TTTCAGGAGGCATTA TERM 3799 3453884 - 3453903 + F 100 -15 -2.72043 | opp_overlap 3453886, overlap 3453883 3453886 3453898 3453899 CGCTTTAGCCGTAAT GAGGGGCG ACAT CGCCCCTC CTTTCAGGAGGCATT TERM 3800 3453886 - 3453901 + F 86 -11.8 -2.90496 | opp_overlap 3453886, overlap 3453884 3453883 3453898 3453899 CTTTAGCCGTAATGA GGGGCG ACAT CGCCCC TCCTTTCAGGAGGCA TERM 3801 3453901 - 3453886 - f 83 -11.8 -2.72344 | opp_overlap 3453886 3453884 3453883 3453898 3453899 CTTTAGCCGTAATGA GGGGCG ACAT CGCCCC TCCTTTCAGGAGGCA YPDSF_3043 3453919 - 3454536 + | putative lipoprotein TERM 3802 3455599 - 3455583 - g 91 -7.9 -5.09173 | opp_overlap 3455583 GAAGATCGTAAAAAA GCCGGGA TTT TCCCTGC TTCATCGGTCGCCTG YPDSF_3044 3454536 - 3456059 + | sugar ABC transporter, ATP-binding protein YPDSF_3045 3456056 - 3457201 + | sugar ABC transporter, permease protein TERM 3803 3457815 - 3457789 - g 72 -3.7 -4.89567 | gap 1, opp_overlap 3457810, overlap 3457784 3457790 3457791 CTGTAAAACACAAAA CGCCAGGCATTG AACT CAATACCGGG-G CTTTAGGGCACGGTT TERM 3804 3458013 - 3458001 - g 76 -4.8 -5.00267 | AACGACAAAAATAAA CTGC AACTG GCAG GGACCACTAAATCAA YPDSF_3046 3457452 - 3458282 + | transketolase subunit YPDSF_3047 3458275 - 3459219 + | transketolase subunit TERM 3805 3459533 - 3459493 - g 80 -10.5 -3.66178 | gap 2, opp_overlap 3459494, overlap 3459494 TTTGGGAACGGGAAA CCGGCAC-GCC-GCTCACG CCAGT CGTAAGCTGGCAGTGCCGT CGTTCAGAGGCTTTC TERM 3806 3459494 - 3459532 + G 74 -11.8 -2.7186 | gap 2, opp_overlap 3459493 3459494 TTGGGAACGGGAAAC CGGCAC-GCC-GCTCACG CCAGT CGTAAGCTGGCAGTGCCG TCGTTCAGAGGCTTT TERM 3807 3459532 - 3459494 - g 82 -14 -2.79492 | gap 2, opp_overlap 3459494, overlap 3459493 TTGGGAACGGGAAAC CGGCAC-GCC-GCTCACG CCAGT CGTAAGCTGGCAGTGCCG TCGTTCAGAGGCTTT TERM 3808 3460682 - 3460693 + G 71 -7.2 -4.07885 | CTGGCAAACGGCCAT CGCG CGTG CGCG TTTTCAGCCGAAATA YPDSF_3048 3459222 - 3460709 + | glycerol kinase TERM 3809 3460917 - 3460903 - g 74 -8.6 -4.08767 | GGGAGGTGTGGAAAA TTGGCA TGA TGCCAA GGTGTGCGCTGAATT YPDSF_3049 3460730 - 3462154 + | hypothetical protein YPDSF_3050 3462359 - 3462108 - | hypothetical protein TERM 3810 3462334 - 3462349 + g 71 -10.4 -3.0395 | opp_overlap 3462329 AAGAGTAAAGTGTCC GCCCCA TGGC TGGGGC TGTTAACCAATATGT YPDSF_3051 3463320 - 3462376 - | transcriptional regulatory protein YPDSF_3052 3464908 - 3463568 - | membrane protein TERM 3811 3464453 - 3464434 - G 70 -9.3 -3.59233 | overlap 3464430 TAACCATTAAAGTAA TCAGCCC CAGCGC GGGCTGA AACATAAGCACCACC TERM 3812 3465010 - 3465026 + H 100 -10.9 -4.41548 | opp_overlap 3465023 ATCATGATTTTTTAT CCCCTTT TAA AAAGGGG TTTTCTCCCCTCTCA TERM 3813 3465036 - 3465023 - H 70 -5.2 -4.56775 | opp_overlap 3465010 ATCCCCTTTTAAAAA GGGG TTTTCT CCCC TCTCACCGCTATTCG TERM 3814 3465292 - 3465282 - g 71 -6.8 -4.27465 | CATAAGTTAAAAGAA CACG GTG CGTG GGTGACCTGTGCAGA YPDSF_3053 3465225 - 3465713 + | competence damage-inducible protein A TERM 3815 3466784 - 3466766 - g 78 -3.8 -5.10933 | opp_overlap 3466767, overlap 3466768 CTATTTAAAAGAAAA CCCAGC CATTGCT GCTGAG TTAGATAAAAAACTG recA 3465828 - 3466898 + | recombinase A TERM 3816 3466926 - 3466957 + F 100 -18.2 -3.6682 | opp_overlap 3466926 3466930, overlap 3466930 ACCAGTTGGAGTAAA CAAACAGACCGTCA CTTG TGGCGGTCTGTTTG TTTGAGTAAATAACA TERM 3817 3466957 - 3466926 - f 100 -16 -3.73953 | opp_overlap 3466926 3466930, overlap 3466930 ACCAGTTGGAGTAAA CAAACAGACCGTCA CTTG TGGCGGTCTGTTTG TTTGAGTAAATAACA TERM 3818 3466953 - 3466930 - f 100 -11 -4.49556 | opp_overlap 3466926 3466930, overlap 3466926 GTTGGAGTAAACAAA CAGACCGTCA CTTG TGGCGGTCTG TTTGTTTGAGTAAAT TERM 3819 3466930 - 3466953 + F 100 -13.2 -4.46514 | opp_overlap 3466930 3466926, overlap 3466926 GTTGGAGTAAACAAA CAGACCGTCA CTTG TGGCGGTCTG TTTGTTTGAGTAAAT recX 3467036 - 3467599 + | recombination regulator RecX TERM 3820 3469669 - 3469656 - g 78 -2.3 -5.27335 | opp_overlap 3469657, overlap 3469657 GCGGCGAAAGAAAAA GGTGC AATG GCACT GTTCGGCGAGAAGTA alaS 3467739 - 3470366 + | alanyl-tRNA synthetase TERM 3821 3470389 - 3470415 + F 100 -11.6 -5.48054 | opp_overlap 3470387 3470389 TCTATTAAATCAACA CGCCATATCTCG GTA CTAGGTATGGCG TTTTTTAATTTTCCT TERM 3822 3470415 - 3470389 - f 74 -9.4 -3.35849 | opp_overlap 3470389, overlap 3470387 TCTATTAAATCAACA CGCCATATCTCG GTA CTAGGTATGGCG TTTTTTAATTTTCCT YPDSF_3057 3470616 - 3470801 + | carbon storage regulator TERM 3823 3470806 - 3470840 + F 100 -15 -5.27206 | opp_overlap 3470812, overlap 3470809 CGACTTACTGATTTT GAAGCAGCGTCTCGTG TAA CACGAGGCGCTACTGC TTTTTATTGTCTCTA TERM 3824 3470809 - 3470837 + F 100 -15.3 -3.43245 | opp_overlap 3470812, overlap 3470806 CTTACTGATTTTGAA GCAGCGTCTCGTG TAA CACGAGGCGCTAC TGCTTTTTATTGTCT TERM 3825 3470834 - 3470812 - f 93 -13.4 -2.72463 | opp_overlap 3470809 3470806 ACTGATTTTGAAGCA GCGTCTCGTG TAA CACGAGGCGC TACTGCTTTTTATTG TERM 3826 3471486 - 3471501 + F 91 -8.2 -4.67635 | opp_overlap 3471486, overlap 3471496 CACCATATTAAGGAA CCTCGC TATA GCGGGG TTTTCTGCTTTTGGC TERM 3827 3471601 - 3471586 - f 73 -9 -3.52102 | overlap 3471600 AGCGTAGCGAGACAA CGTTGC TTTA GCAACG GCCCGTAGGGCGAGG TERM 3828 3471658 - 3471673 + F 91 -8.2 -4.67635 | opp_overlap 3471658, overlap 3471668 CACCATATTAAGGAA CCTCGC TATA GCGGGG TTTTCTGCTTTTGGC YPDSF_3058 3471898 - 3472464 + | fructose-1-phosphatase YPDSF_3059 3472461 - 3472889 + | hypothetical protein YPDSF_3060 3472933 - 3474531 + | glutamate--cysteine ligase TERM 3829 3474558 - 3474541 - f 100 -11.3 -5.55001 | CAATAAAAAAGAAAA GGCCACA TCAC TGTGGCC AAATTAACATCTCTA TERM 3830 3474625 - 3474597 - f 100 -10.4 -4.36554 | GATGATGATAACAAA TGCGCGTCTT TCACATATT AAGACGCGCA GGATGAGTAAAAGTT YPDSF_3061 3474699 - 3475214 + | S-ribosylhomocysteinase TERM 3831 3475248 - 3475265 + T 87 -4.8 -5.46657 | opp_overlap 3475248 3475243 3475250 AGGAGAATGATAAAA GGCGCT GATTAA AGCGTC TTTTTTATTAAACTG YPDSF_3062 3476586 - 3475303 - | hypothetical protein YPDSF_3063 3477548 - 3476655 - | hypothetical protein TERM 3832 3478072 - 3478060 - g 70 -9.1 -3.62518 | opp_overlap 3478060 TCAAACAGTTGGAAA CCCTG GCT CAGGG TGTTGGCATTGATTT TERM 3833 3478682 - 3478672 - g 71 -6.8 -4.26076 | opp_overlap 3478674 GTATGTTGAGTAAAA TGCC AGG GGCA GGTCAGTTGCCAGAA YPDSF_3064 3477612 - 3478973 + | signal recognition particle protein YPDSF_3065 3479146 - 3478982 - | hypothetical protein TERM 3834 3479080 - 3479100 + g 70 -2.6 -5.00884 | opp_overlap 3479080 CAAAATGTGCGAACA GGAATCTA CGCTT TAGATTGC TTTTTTCGCCAAAAT TERM 3835 3479144 - 3479177 + g 100 -18.3 -4.67982 | GGGCTTTTTATATTG CAACTGGACCCCGTT CCCC GATGGGGTCCAGTTG TTTTATTAACTAAAG rpsP 3479201 - 3479449 + | 30S ribosomal protein S16 rimM 3479471 - 3480019 + | 16S rRNA-processing protein trmD 3480058 - 3480798 + | tRNA (guanine-N(1)-)-methyltransferase rplS 3480879 - 3481226 + | 50S ribosomal protein L19 TERM 3836 3481288 - 3481268 - T 86 -12.6 -2.52987 | opp_overlap 3481268, overlap 3481267 TTAATACTTATGAAG GGGCTAGC CATGT GCTAGCCC TTTTTTGTGCTCTAT TERM 3837 3481268 - 3481288 + T 100 -12.6 -5.35459 | opp_overlap 3481268 3481267 TTAATACTTATGAAG GGGCTAGC CATGT GCTAGCCC TTTTTTGTGCTCTAT TERM 3838 3481470 - 3481448 - T 74 -10.6 -2.69545 | opp_overlap 3481450, overlap 3481447 3481450 GGCAGAGAGGAGAAT TAGCGCGGTA TCA CACCACGCTA TATAGACGAATGGTG YPDSF_3070 3482255 - 3481488 - | hypothetical protein YPDSF_3071 3483174 - 3482578 - | Dcu family anaerobic C4-dicarboxylate transporter YPDSF_3072 3483923 - 3483243 - | hypothetical protein YPDSF_3073 3485068 - 3484352 - | putative two-component response-regulatory protein YehT TERM 3839 3485388 - 3485375 - g 76 -5.3 -4.8143 | opp_overlap 3485367, overlap 3485367 3485379 GGAAGAACTGAAAAA TCAGT TTCC ACTGA GCGAAAATGATCAGT YPDSF_3074 3485295 - 3486248 + | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 3840 3486253 - 3486271 + F 100 -13.2 -4.01078 | CCAGGGGGTAATCTG CTCTCCTG ATT CAGGAGAG TTTATGGTCACTTTT YPDSF_3075 3486275 - 3487297 + | transposase TERM 3841 3487378 - 3487364 - g 77 -11.4 -3.3506 | overlap 3487355 TGGAAAGCCTTATAA GCGCAG CGC CTGCGC TGTCACAACAGGCAG YPDSF_3076 3487297 - 3488076 + | transposase/IS protein TERM 3842 3488254 - 3488236 - T 100 -16 -3.07307 | opp_overlap 3488236 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 3843 3488236 - 3488254 + T 100 -16 -4.36914 | opp_overlap 3488236 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 3844 3488300 - 3488273 - T 100 -9.3 -5.24129 | gap 1, opp_overlap 3488277 TCTGGGCACAAAAAA TGGAGCAA-ACG ACGGA CGTCTTGCTCCA TTAAAATAAAGTAGG YPDSF_3077 3488724 - 3488338 - | nucleoside triphosphate pyrophosphohydrolase TERM 3845 3488807 - 3488783 - R 89 -7.2 -4.97888 | gap 1, overlap 3488787 AAAAAAACTTAAAAA TAAAGGGCGGT ATTA ACCGCCC-TCA GACTGCTGACAAACC TERM 3846 3488804 - 3488787 - R 100 -12.7 -4.92828 | overlap 3488783 AAACTTAAAAATAAA GGGCGGT ATTA ACCGCCC TCAGACTGCTGACAA TERM 3847 3488893 - 3488867 - R 84 -10.1 -3.82218 | gap 1, opp_overlap 3488876, overlap 3488868 3488883 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 3848 3488894 - 3488868 - R 72 -10.1 -2.88849 | gap 1, opp_overlap 3488876, overlap 3488867 3488883 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT TERM 3849 3488972 - 3488989 + r 100 -12.7 -4.21343 | opp_overlap 3488967 3488968, overlap 3488967 TTGTCAATAACCTCA GGGCGGT ATTA ACCGCCC TTTATCTATATTACA secA 3491733 - 3489019 - | preprotein translocase subunit SecA TERM 3850 3490617 - 3490627 + g 76 -6.8 -4.50661 | opp_overlap 3490616 3490617 GGAAAGTGATAGAAG CCAG TGT CTGG TTTTCATTCTGGATT TERM 3851 3491644 - 3491664 + g 70 -4.7 -4.65895 | overlap 3491647 AATATCAGGTTCCAT GCGGTTGAT GAC ATCAACTAC TTTTTGCATGCGGCG YPDSF_3079 3492344 - 3491811 - | SecA regulator SecM TERM 3852 3492884 - 3492847 - g 71 -11.4 -2.71731 | opp_overlap 3492837 GTGATCTTGGAACGA CTGGCTGCGTTGGC CGGAGAGGGT GCCAACGCAACCAA GCGTGATAAGTAGCT YPDSF_3080 3492373 - 3492897 + | hypothetical protein lpxC 3493999 - 3493064 - | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase TERM 3853 3493905 - 3493915 + g 79 -5.4 -5.04385 | GGCGCGGGTCGCATT GTCA GCG TGAC TTTTTTACCGGTGTG YPDSF_3082 3495235 - 3494084 - | cell division protein FtsZ TERM 3854 3494953 - 3494986 + g 72 -8.1 -3.85522 | overlap 3494955 TAAAGACCATATCCG CACCGTCAAGCGCTG CACG CAGAGCTTCACGGTC TTCTTCTGCTGAATT TERM 3855 3494955 - 3494984 + g 77 -10.7 -3.50808 | overlap 3494953 AAGACCATATCCGCA CCGTCAAGCGCTG CACG CAGAGCTTCACGG TCTTCTTCTGCTGAA ftsA 3496564 - 3495308 - | cell division protein FtsA YPDSF_3084 3497418 - 3496591 - | cell division protein FtsQ TERM 3856 3497045 - 3497057 + g 76 -7.7 -4.30014 | GCGAAGGGCACGTAC TCCAC CAG GTGGA TTTTAAGTTCATCCG TERM 3857 3497358 - 3497371 + g 70 -3.1 -4.82901 | gap 1 ATTGGCTCCCGTTAC TGC-GC CGG GCTGCA TTTTTCTCCGCCGCA ddl 3498340 - 3497420 - | D-alanine--D-alanine ligase murC 3499856 - 3498333 - | UDP-N-acetylmuramate--L-alanine ligase murG 3501016 - 3499946 - | N-acetylglucosaminyl transferase YPDSF_3088 3502215 - 3501013 - | cell division protein FtsW murD 3503531 - 3502215 - | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase TERM 3858 3502693 - 3502663 - G 79 -11.3 -3.55622 | gap 2 GTCAAGGCTTTCAAA CTGGATGCCCGTGGG ATA CCCACGG-CATC-AG CTAATGCCAGGGCGG mraY 3504616 - 3503534 - | phospho-N-acetylmuramoyl-pentapeptide-transferase murF 3505986 - 3504610 - | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase murE 3507470 - 3505983 - | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase YPDSF_3093 3509220 - 3507457 - | penicillin-binding protein 3 TERM 3859 3507993 - 3507977 - G 70 -8.7 -3.60098 | opp_overlap 3507977 3507979 AGCCCGTAGCCGAAA GAGAAGG TGG CCCTCTC TATGTCAGACCACCG TERM 3860 3509176 - 3509156 - G 74 -6.8 -4.31085 | opp_overlap 3509157, overlap 3509157 CACAGCAACGCAAAA CGCCAGCT AATAA AGCTGGCT TGTTCTTCCTGACGC TERM 3861 3509157 - 3509175 + g 84 -10.3 -3.99374 | opp_overlap 3509156 3509157 ACAGCAACGCAAAAC GCCAGCT AATAA AGCTGGC TTGTTCTTCCTGACG TERM 3862 3509175 - 3509157 - G 71 -10.3 -3.17928 | opp_overlap 3509157, overlap 3509156 ACAGCAACGCAAAAC GCCAGCT AATAA AGCTGGC TTGTTCTTCCTGACG YPDSF_3094 3509603 - 3509286 - | cell division protein FtsL mraW 3510556 - 3509600 - | S-adenosyl-methyltransferase MraW YPDSF_3096 3511017 - 3510559 - | cell division protein MraZ TERM 3863 3511669 - 3511695 + H 72 -10.1 -2.88849 | gap 1, opp_overlap 3511658, overlap 3511664 3511670 ACATCCATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCTCTGCC TERM 3864 3511670 - 3511696 + H 84 -10.1 -3.82218 | gap 1, opp_overlap 3511658, overlap 3511664 3511669 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCTCTGCCT TERM 3865 3512498 - 3512510 + G 83 -5.5 -5.09173 | CAATGGTTATGGGGG TGGCC TAC GGCTA TTTTTTGGAATATTG YPDSF_3097 3512119 - 3512559 + | hypothetical protein TERM 3866 3512681 - 3512657 - T 100 -9.9 -4.49556 | opp_overlap 3512660, overlap 3512659 3512660 TTGTCAGCAAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCATATGCGCCTAT TERM 3867 3512679 - 3512659 - T 100 -12.5 -3.85603 | opp_overlap 3512660, overlap 3512657 3512660 GTCAGCAAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 3868 3512660 - 3512678 + T 100 -16 -4.8048 | opp_overlap 3512659 3512657 3512660 TCAGCAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 3869 3512678 - 3512660 - T 100 -16 -2.90639 | opp_overlap 3512660, overlap 3512659 3512657 TCAGCAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC YPDSF_3098 3513217 - 3512759 - | transposase for the IS1541 insertion element TERM 3870 3513348 - 3513330 - R 100 -16 -3.07307 | opp_overlap 3513330 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAT TERM 3871 3513330 - 3513348 + r 100 -16 -4.37092 | opp_overlap 3513330 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAT TERM 3872 3513386 - 3513369 - R 100 -11.3 -4.48987 | opp_overlap 3513369 TGGGCACAATCAAAA TCAGGGC GGGT GCCCTGA TTCGTTATAGTGAAC TERM 3873 3513369 - 3513386 + r 89 -11.3 -3.47322 | opp_overlap 3513369 TGGGCACAATCAAAA TCAGGGC GGGT GCCCTGA TTCGTTATAGTGAAC YPDSF_3099 3514411 - 3513401 - | DNA-binding transcriptional regulator FruR TERM 3874 3514394 - 3514378 - G 70 -9.3 -3.53012 | opp_overlap 3514377 CCGTTGTGCGCGAAA CGCCCGC AAG GCGCGCG ATCTCATCCAGTTTC TERM 3875 3514460 - 3514447 - R 74 -6.7 -4.33165 | overlap 3514452 GTAAAGTGATGAAAA GCAGA GCGC TCTGC CGAGAGCCAGCATCC TERM 3876 3514842 - 3514810 - R 100 -11.3 -5.54403 | opp_overlap 3514817, overlap 3514816 3514817 AAAAAATAAGAAAAA TAAATATCCTCCGGC ATA GCCGGAGGTTTTTCA TATGCGCCTATAAGG TERM 3877 3514836 - 3514816 - R 100 -12.5 -4.13123 | opp_overlap 3514817, overlap 3514810 3514817 TAAGAAAAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 3878 3514817 - 3514835 + r 100 -16 -4.8048 | opp_overlap 3514816 3514810 3514817 AAGAAAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 3879 3514835 - 3514817 - R 100 -16 -3.05433 | opp_overlap 3514817, overlap 3514816 3514810 AAGAAAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC YPDSF_3100 3515374 - 3514916 - | transposase for the IS1541 insertion element TERM 3880 3515487 - 3515505 + r 100 -16 -4.36914 | opp_overlap 3515487 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 3881 3515505 - 3515487 - R 100 -16 -3.07307 | opp_overlap 3515487 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 3882 3515544 - 3515524 - R 100 -13.3 -5.24129 | TCTGGGCACAAAAAA GCTCAACGC TAT GCGCTGAGC CCGATCATTAGAGCG ilvH 3516067 - 3515573 - | acetolactate synthase 3 regulatory subunit YPDSF_3102 3517797 - 3516070 - | acetolactate synthase 3 catalytic subunit TERM 3883 3517349 - 3517326 - G 77 -11 -3.36492 | gap 1 TTGGCAAGTCGATAA CCACCGGACCG GGA CGG-CCAGTGG ATGCCAGATAAAAGG TERM 3884 3517866 - 3517880 + r 75 -5.6 -4.64159 | opp_overlap 3517868, overlap 3517868 CGATATTCTGTAGGA AAGGCG CAA CGCCTC TTTATTCTTATTTGT TERM 3885 3517878 - 3517868 - R 73 -8.2 -3.73402 | opp_overlap 3517866 3517868 ATATTCTGTAGGAAA GGCG CAA CGCC TCTTTATTCTTATTT TERM 3886 3517868 - 3517878 + r 75 -8.2 -3.90009 | opp_overlap 3517868, overlap 3517866 ATATTCTGTAGGAAA GGCG CAA CGCC TCTTTATTCTTATTT TERM 3887 3518238 - 3518199 - R 100 -13.6 -3.5362 | overlap 3518197 3518201 GAACGGTCAGAAAGA CAGCAGCGACCAGTGTGA GACT TAACACCGGTCACTGCGG GGAGGAATGGTGAAC TERM 3888 3518236 - 3518201 - R 100 -14.8 -3.33798 | overlap 3518199 3518197 ACGGTCAGAAAGACA GCAGCGACCAGTGTGA GACT TAACACCGGTCACTGC GGGGAGGAATGGTGA TERM 3889 3518323 - 3518302 - R 84 -10.1 -3.74693 | TGCCACCGTATTAAA GGTGATCGC TCAG GCGGTCACC GAACTCGATAATAAA YPDSF_3103 3519505 - 3518297 - | transposase for the IS285 insertion element YPDSF_3104 3521385 - 3519580 - | AMP-binding enzyme-family protein leuO 3522912 - 3521956 - | leucine transcriptional activator TERM 3890 3522230 - 3522246 + g 80 -2.2 -5.39721 | opp_overlap 3522230 GTTGAGTCGTAATAA GGCTCA CTGAA TGACCC TTTTTTATCTAATGA TERM 3891 3523300 - 3523282 - H 72 -6.2 -4.35885 | opp_overlap 3523282 3523281 3523297, overlap 3523297 AGCCACCACAACAAA TTTATATT AGT AATATAAA AATTTTAATTATAAT TERM 3892 3524084 - 3524065 - H 86 -10.6 -3.83155 | opp_overlap 3524066, overlap 3524066 CATCAAGATTAACAA GCCCGCGC AAAT GCGCGGGT TTTTTTTTATCCGCT TERM 3893 3524083 - 3524066 - H 95 -14.1 -2.8917 | opp_overlap 3524066, overlap 3524065 ATCAAGATTAACAAG CCCGCGC AAAT GCGCGGG TTTTTTTTTATCCGC TERM 3894 3524066 - 3524083 + H 100 -14.1 -6.22802 | opp_overlap 3524065 3524066 ATCAAGATTAACAAG CCCGCGC AAAT GCGCGGG TTTTTTTTTATCCGC YPDSF_3106 3524129 - 3525691 + | 2-isopropylmalate synthase YPDSF_3107 3525694 - 3526785 + | 3-isopropylmalate dehydrogenase TERM 3895 3526845 - 3526829 - g 70 -2.9 -4.80882 | opp_overlap 3526830, overlap 3526830 ACGTTATACCAAAAA TTGTACG ATG CGCACAT TGTGCATGAAGCCCC TERM 3896 3527286 - 3527274 - g 70 -9.1 -3.64703 | TGTTGGCGACCCAAA CCCTG AAG CAGGG GCGAGCCAAAACCAT YPDSF_3108 3526787 - 3528217 + | isopropylmalate isomerase large subunit TERM 3897 3528298 - 3528285 - g 70 -8.1 -3.78022 | GTTAGATGCAGCAAA CGTCG ATAC CGACG CGATTATCCCTAAGC leuD 3528232 - 3528834 + | isopropylmalate isomerase small subunit TERM 3898 3528975 - 3528945 - T 86 -12 -3.20896 | gap 1, overlap 3528943 3528941 TAAGTAACTAATAGA TTGTTGGTGCCGG GTCGTA CCGGC-CCAACAA GTAACACGTTTAACT YPDSF_3110 3530256 - 3529075 - | hypothetical protein TERM 3899 3529729 - 3529719 - G 80 -3.2 -5.31855 | CACTAATAACAAAAA TACC GGC GGCA ATGCTAAACATCAGC TERM 3900 3530291 - 3530280 - H 71 -4.4 -4.84359 | CCAGCGCCAGAAAAA GCTA TTAT TAGC ATAATCATAATGGTG TERM 3901 3530741 - 3530720 - H 100 -8.7 -5.93252 | GGGAAAAAGAAAAAA GCCAGCAGA AAAA CCTACTGGC TGGTGAAAAACACCA YPDSF_3111 3530920 - 3532581 + | transcriptional regulator SgrR TERM 3902 3533758 - 3533748 - gf 74 -4.6 -4.75174 | GATGGAAGGTAAAAA CAGC CAG GCCG ATGTGATTTTAGGGT TERM 3903 3533829 - 3533807 - gf 74 -7 -4.30987 | opp_overlap 3533807, overlap 3533803 AGGCGGCAGAACAAA CCGGCTTG TTTACCC CAAGCCAG GTTGATACCCGTAAC tbpA 3533437 - 3534513 + | thiamine transporter substrate binding subunit TERM 3904 3534519 - 3534536 + GF 77 -10.5 -3.14931 | CAGCCGTTAATCGCG CCCTGGC TATG GCCGGGG TTGCTGGCCGCTGGG TERM 3905 3535868 - 3535901 + GF 84 -10.9 -3.58905 | opp_overlap 3535867 3535866, overlap 3535870 3535874 ACGCGCCCTGAAACG CCCACTGGCTCAGGC GCTG GCCTTTGCCAGTGTG TTATCTATCGGCGAT TERM 3906 3535870 - 3535899 + GF 89 -12.1 -3.37198 | opp_overlap 3535867 3535866, overlap 3535868 3535874 GCGCCCTGAAACGCC CACTGGCTCAGGC GCTG GCCTTTGCCAGTG TGTTATCTATCGGCG thiP 3534477 - 3536096 + | thiamine transporter membrane protein thiQ 3536083 - 3536793 + | thiamine transporter ATP-binding subunit YPDSF_3115 3537629 - 3536862 - | DedA family membrane protein TERM 3907 3537193 - 3537170 - G 76 -8.1 -4.2074 | CGGGGAAGAGATAAA TCGGCGGCC ATGTCA GGCCACCAA TCACACTGGGTAAGG TERM 3908 3538643 - 3538654 + G 71 -7.2 -4.09805 | GCATTTCTTTGCTTC CGCC GCCG GGCG TTTAATTATTGATGG TERM 3909 3539339 - 3539365 + G 78 -3.7 -5.1101 | gap 2, overlap 3539340 TATGAATGCCTTTTA TGGC-GT-GCTGG GTT CCAGCGGCTGCCG TTTTTTCGATCCTCG YPDSF_3116 3537825 - 3540194 + | DNA polymerase II TERM 3910 3540986 - 3541024 + G 90 -11.7 -4.08216 | opp_overlap 3540997 3540998 ACAGGATCGCTTATT CGCCGGTCAAATCGATC GCATG GATCGCTTTGCCCTGCG TTTTCGCGCCCGTAA YPDSF_3117 3540639 - 3543545 + | ATP-dependent helicase HepA TERM 3911 3543666 - 3543692 + T 70 -7.2 -3.82218 | gap 1, opp_overlap 3543654, overlap 3543665 CATCCATGTAGGCTC GAG-CCGCGCC CTCCCT GGCGCGGACGC TTTACTCCTCTGCCT TERM 3912 3543755 - 3543777 + T 100 -13.5 -5.71712 | TTGTCAGCAGTCTGA TATCCGGGG CATTC CCCCGGATA TTTTTTTGTCTGACG YPDSF_3118 3544154 - 3543801 - | hypothetical protein YPDSF_3119 3547670 - 3544176 - | membrane protein YPDSF_3120 3549268 - 3547679 - | OmpA-family membrane protein YPDSF_3121 3550620 - 3549265 - | hypothetical protein TERM 3913 3549831 - 3549843 + g 70 -4.8 -4.65895 | opp_overlap 3549805 ATTGGAACAACTGCT CAGG GTGTA CCTG TTTTTGCATCAACAC YPDSF_3122 3551231 - 3550740 - | putative lipoprotein TERM 3914 3551010 - 3551027 + g 79 -9.1 -4.18488 | opp_overlap 3551009 CCCCTGATACAAACC GGGGGGT GACC ACCCCTC TTTATTCAGCTCAAT YPDSF_3123 3551589 - 3551224 - | hypothetical protein YPDSF_3124 3552212 - 3551595 - | hypothetical protein YPDSF_3125 3553308 - 3552205 - | hypothetical protein TERM 3915 3553246 - 3553206 - G 82 -6.9 -4.88795 | opp_overlap 3553215 ATTGAATAAAATAAA CCTCAGACAGCGTTAACTG CTG CAACTGACGCTGTGTAAAG TGCCGGCCAATAATC YPDSF_3126 3555553 - 3553334 - | hypothetical protein TERM 3916 3555404 - 3555387 - G 74 -9.9 -3.6106 | TCCAACATGCGGAAA GAAAGCG GTGC CGCTTTC CATGCCTGCCAGATC YPDSF_3127 3557914 - 3555566 - | hypothetical protein YPDSF_3128 3560606 - 3558018 - | Clp ATPase YPDSF_3129 3561607 - 3560624 - | hypothetical protein YPDSF_3130 3563444 - 3561600 - | hypothetical protein YPDSF_3131 3563920 - 3563477 - | hypothetical protein YPDSF_3132 3564512 - 3563994 - | hypothetical protein TERM 3917 3564562 - 3564578 + r 76 -10.9 -2.72991 | GTTAAATCAGTATTC GGCAACT CAA AGTTGCC TCATTAAAAATGTAC TERM 3918 3564652 - 3564677 + r 73 -5.5 -4.74598 | gap 1, opp_overlap 3564655 3564659 ATATTCCCCCTCTAA TAAGCG-AGTGA TAT TCACAGCGCTTA TTTCTTTTCGCTTTC YPDSF_3133 3566186 - 3564675 - | hypothetical protein TERM 3919 3565410 - 3565396 - G 70 -4.3 -4.67038 | opp_overlap 3565396, overlap 3565391 TCTTCAAAAGCAAAA TCATC AATAG GATGA TTTTTGGCACCATAC TERM 3920 3566054 - 3566040 - G 70 -11.4 -2.52015 | overlap 3566039 GGCATACGCAGCAAG CGTGCC TAT GGCACG GCGCACTGTGGCGGA YPDSF_3134 3566746 - 3566186 - | hypothetical protein YPDSF_3135 3567755 - 3566757 - | hypothetical protein YPDSF_3136 3568181 - 3568843 + | hypothetical protein TERM 3921 3568999 - 3568973 - f 100 -15.4 -3.16881 | opp_overlap 3568975 CACGTATCTGACGAA TAGTGTCCATTA TCT TAATGGACACTA TTACCCCAAATATAT TERM 3922 3568975 - 3568997 + F 100 -13.6 -3.02263 | opp_overlap 3568973 CGTATCTGACGAATA GTGTCCATTA TCT TAATGGACAC TATTACCCCAAATAT YPDSF_3137 3570066 - 3570686 + | ribosomal large subunit pseudouridine synthase A djlA 3571817 - 3570984 - | DNA-J like membrane chaperone protein YPDSF_3139 3571966 - 3574344 + | organic solvent tolerance protein YPDSF_3140 3574412 - 3575716 + | peptidyl-prolyl cis-trans isomerase SurA TERM 3923 3575775 - 3575805 + GF 95 -14.1 -2.62396 | GATTTAGCCATCACT CTGGCTCAACAGG ATTGG CCTGTTGAGCTGG TAGTCTGCGCGGATC pdxA 3575691 - 3576695 + | 4-hydroxythreonine-4-phosphate dehydrogenase ksgA 3576688 - 3577506 + | dimethyladenosine transferase apaG 3577520 - 3577897 + | ApaG apaH 3577914 - 3578783 + | diadenosine tetraphosphatase TERM 3924 3578821 - 3578850 + T 77 -10.9 -2.78706 | opp_overlap 3578826, overlap 3578826 TTGTAAAGACGCTAA TTAAAGACGCATG AGCT TATGCGTCTTTAG ATTTCACCTATAATT TERM 3925 3578826 - 3578845 + T 75 -8.6 -3.85165 | opp_overlap 3578826, overlap 3578821 AAGACGCTAATTAAA GACGCATG AGCT TATGCGTC TTTAGATTTCACCTA TERM 3926 3578845 - 3578826 - T 74 -7.9 -3.93026 | opp_overlap 3578826 3578821 AAGACGCTAATTAAA GACGCAT GAGCTT ATGCGTC TTTAGATTTCACCTA YPDSF_3145 3579337 - 3578873 - | hypothetical protein TERM 3927 3580132 - 3580106 - g 100 -15.3 -4.05788 | opp_overlap 3580102 3580101 3580106 3580108 TTTTTCTAAATGAAA CAGGCCCATTA TTACC TAATGGGCCTG TATGCTAATTGTTTT TERM 3928 3580106 - 3580132 + G 86 -15.3 -2.91094 | opp_overlap 3580106, overlap 3580102 3580101 3580108 TTTTTCTAAATGAAA CAGGCCCATTA TTACC TAATGGGCCTG TATGCTAATTGTTTT TERM 3929 3580108 - 3580130 + G 76 -12.1 -2.9913 | opp_overlap 3580106, overlap 3580106 3580102 3580101 TTTCTAAATGAAACA GGCCCATTA TTACC TAATGGGCC TGTATGCTAATTGTT YPDSF_3146 3579952 - 3580140 + | hypothetical protein folA 3580649 - 3580167 - | dihydrofolate reductase TERM 3930 3580577 - 3580526 - G 77 -11 -3.37796 | TCTTACGACCCATAA TTACCGGTTTATTTAACGTGTTAC GTTT GAACCACGCTAAATCAGCCGGTAA ATGCCATGGCATAGC YPDSF_3148 3581254 - 3580799 - | hypothetical protein YPDSF_3149 3582051 - 3581251 - | hypothetical protein TERM 3931 3582193 - 3582178 - H 70 -2.6 -4.93296 | CCATCAGGATAAAAA TCATTA ATTT CAATGA ACTGAATCACATCGG YPDSF_3150 3582312 - 3582989 + | LysE type translocator TERM 3932 3583164 - 3583191 + T 79 -8.4 -4.07885 | opp_overlap 3583168, overlap 3583168 TAAGCTACGAACGTA AAAAGGGCGATG TTGC CATCGCCCTTGA TTTTCGCCACGGATG TERM 3933 3583187 - 3583168 - T 100 -13.6 -4.7629 | opp_overlap 3583164 3583168 CTACGAACGTAAAAA GGGCGATG TTGC CATCGCCC TTGATTTTCGCCACG TERM 3934 3583168 - 3583187 + T 100 -13.6 -3.66908 | opp_overlap 3583168, overlap 3583164 CTACGAACGTAAAAA GGGCGATG TTGC CATCGCCC TTGATTTTCGCCACG carB 3586450 - 3583217 - | carbamoyl phosphate synthase large subunit TERM 3935 3585483 - 3585469 - G 70 -11.4 -2.52896 | CCAGTGTGTAACCGA CCGCCA GTT TGGCGG CAATCTTGGCAATCG TERM 3936 3585492 - 3585511 + g 74 -10 -3.53444 | TTGGCGGCAATCTTG GCAATCGG GAAA CCGGTTGC TTTAGAGGCCAGTGC TERM 3937 3586407 - 3586425 + g 74 -2.2 -5.07275 | opp_overlap 3586383 3586400 3586399, overlap 3586411 ATAACAATCGGGCCT GCGCCCAG AAT CAGGATGC TTTTTATATCTGTAC YPDSF_3152 3587641 - 3586466 - | carbamoyl phosphate synthase small subunit TERM 3938 3586901 - 3586922 + g 71 -10.9 -3.05596 | GATCGCGTAATCGCA TGGTTCTGG ATCC CCAGGACCA TTGGATAAGAAGATG TERM 3939 3588058 - 3588040 - R 85 -2.4 -5.80951 | opp_overlap 3588040 ATTTAAAATAAAAAA GGATAATA AAA TATTGCCC TATTATCAAATGATT TERM 3940 3588101 - 3588084 - R 82 -5.6 -4.93296 | opp_overlap 3588084 TGATTATGATAAAAA CAACCA CATCAC TGGTTG TAATTTAAAGCATTA YPDSF_3153 3588935 - 3588114 - | dihydrodipicolinate reductase TERM 3941 3589305 - 3589288 - R 100 -8.4 -5.46657 | overlap 3589300 TACCCCAATAAAAAA GCAGCC ACAAAG GGCTGC TTCAGACTGCTGACA TERM 3942 3589440 - 3589457 + r 75 -8.4 -3.767 | opp_overlap 3589435 TATCAATAACCTCAA GCAGCC GCAAAG GGCTGC TTTCGTCAGTAAATA ispH 3590470 - 3589517 - | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase YPDSF_3155 3590984 - 3590451 - | FKBP-type peptidyl-prolyl cis-trans isomerase lspA 3591486 - 3590977 - | lipoprotein signal peptidase TERM 3943 3591376 - 3591356 - G 76 -4.7 -5.03314 | overlap 3591357 GTTAGGTTGAAAAAA GGAATCAGT GGC ACCGATTCA TACAGAGCAAAGTGG ileS 3594302 - 3591486 - | isoleucyl-tRNA synthetase YPDSF_3158 3595272 - 3594334 - | bifunctional riboflavin kinase/FMN adenylyltransferase TERM 3944 3594896 - 3594869 - G 88 -10.6 -4.15565 | gap 1 TGCAGTAGTTGAAAA TCC-CCCTGGCGC CCT GCGCCAAAGCGGA AGTCATCACCTACCG TERM 3945 3595849 - 3595834 - g 76 -6.2 -4.62783 | GACGCAGCGCAAAAA GCATTT AATG AAATGC AACCAATCGTGGATC rpsT 3595687 - 3595950 + | 30S ribosomal protein S20 TERM 3946 3595972 - 3596001 + T 100 -14.5 -3.08344 | opp_overlap 3595978 3595980, overlap 3595980 GACATTGAGTGCTTG TAAAAAGACCGGC TTAG GCCGGTTTTTTTA TCTCTATCGTTTGGC TERM 3947 3595995 - 3595978 - T 76 -6.9 -4.57073 | opp_overlap 3595972 3595980, overlap 3595980 GAGTGCTTGTAAAAA GACCGGC TTAG GCCGGTT TTTTTATCTCTATCG TERM 3948 3595993 - 3595980 - T 81 -9.5 -3.90048 | opp_overlap 3595972 3595980, overlap 3595978 GTGCTTGTAAAAAGA CCGGC TTAG GCCGG TTTTTTTATCTCTAT TERM 3949 3595980 - 3595993 + T 100 -9.5 -5.77988 | opp_overlap 3595980 3595978, overlap 3595972 GTGCTTGTAAAAAGA CCGGC TTAG GCCGG TTTTTTTATCTCTAT nhaR 3596980 - 3596081 - | transcriptional activator NhaR TERM 3950 3597086 - 3597057 - R 100 -13.7 -3.2048 | TTTAAATTCCACCAA GCATTGCTGCC TGCGCTTG GGCAGCAATGC TGAATCAATAACGTG YPDSF_3161 3598294 - 3597110 - | sodium-proton antiporter TERM 3951 3598497 - 3598456 - R 74 -9.7 -3.12803 | opp_overlap 3598458 3598467, overlap 3598439 3598458 3598467 TATCCATATTCAACA GATAAAAAAAATCCTCGAT ATCA ACCGAGGATTTCTTTCATT TTACTTTATTAGCTG TERM 3952 3598458 - 3598495 + r 75 -5.7 -4.67942 | opp_overlap 3598439 3598458 3598456 3598467, overlap 3598467 TCCATATTCAACAGA TAAAAAAAATCCTCGAT ATCA ACCGAGGATTTCTTTCA TTTTACTTTATTAGC TERM 3953 3598495 - 3598458 - R 93 -12.3 -3.12142 | opp_overlap 3598458 3598467, overlap 3598439 3598456 3598467 TCCATATTCAACAGA TAAAAAAAATCCTCGAT ATCA ACCGAGGATTTCTTTCA TTTTACTTTATTAGC TERM 3954 3598486 - 3598467 - R 100 -8.6 -6.08563 | opp_overlap 3598458 3598467, overlap 3598458 3598456 AACAGATAAAAAAAA TCCTCGAT ATCA ACCGAGGA TTTCTTTCATTTTAC TERM 3955 3598467 - 3598486 + r 77 -6.4 -4.67692 | opp_overlap 3598467 3598458 3598456, overlap 3598458 AACAGATAAAAAAAA TCCTCGAT ATCA ACCGAGGA TTTCTTTCATTTTAC YPDSF_3162 3599676 - 3598537 - | chaperone protein DnaJ TERM 3956 3598587 - 3598600 + g 83 -3.1 -5.40072 | CATCTAAGAAACTTT TAGCT CGCG GGCTA TTTTTTTCACCAGCA TERM 3957 3599702 - 3599739 + r 100 -15.5 -3.53224 | opp_overlap 3599700, overlap 3599705 CCTACCCTTAACATG CGTGCACGGGCGTAGAG TTTC CTCGACGCCCGTGCTGG TTTCCAGCAACAGTA TERM 3958 3599705 - 3599736 + r 100 -20.2 -2.90496 | opp_overlap 3599700, overlap 3599702 ACCCTTAACATGCGT GCACGGGCGTAGAG TTTC CTCGACGCCCGTGC TGGTTTCCAGCAACA YPDSF_3163 3601698 - 3599788 - | molecular chaperone DnaK TERM 3959 3601360 - 3601370 + g 74 -2.4 -5.12707 | overlap 3601341 3601340 3601367 TTCAGCAGAGATCTG CGGC GGT GCCA TTTTTTGGCCTTTAA TERM 3960 3602099 - 3602111 + G 75 -10.5 -3.39668 | overlap 3602100 AAGTTGGCGAATCCT GGCCC ATT GGGCC TTATGGGCTTTGGGA TERM 3961 3602146 - 3602160 + G 71 -7.1 -4.16842 | opp_overlap 3602146 TACCGTCTTGCTAAA CCTGC ACAAC GCAGG TTTCTTCCCACTGAG TERM 3962 3602266 - 3602252 - g 90 -5.7 -5.31275 | opp_overlap 3602263 TTGGAGTATAAAAAA GGCAA CACAT TTGCC GCCACCGCATTTACC YPDSF_3164 3602072 - 3602683 + | hypothetical protein TERM 3963 3602754 - 3602716 - f 100 -17.8 -2.97925 | opp_overlap 3602716 AGCTTATATTACACA GCACCTTGAATATTAGAT AAA ATTTAATATTCAAGGTGC TTTTACTTTCCACTC TERM 3964 3602716 - 3602754 + F 100 -20 -4.55798 | opp_overlap 3602716 AGCTTATATTACACA GCACCTTGAATATTAGAT AAA ATTTAATATTCAAGGTGC TTTTACTTTCCACTC TERM 3965 3603265 - 3603238 - g 80 -2.1 -5.48163 | gap 1, opp_overlap 3603238 AAAGAAATTAAAAAA TGATGTCA-ACC TAGAC GGTATGAAATCA TTTGGACTATATAAT YPDSF_3165 3602972 - 3605419 + | hypothetical protein TERM 3966 3605476 - 3605434 - T 78 -5.3 -5.04597 | gap 2, opp_overlap 3605441, overlap 3605436 3605441 AGGTATAGAGAAAAA GATAAAAGCCCATAATTTATT GAT AATAA-TTATGGGCTTTT-TA AAGTGAATTGACTTA TERM 3967 3605475 - 3605436 - T 91 -10.4 -4.14422 | gap 1, opp_overlap 3605441, overlap 3605434 3605441 GTATAGAGAAAAAGA TAAAAGCCCATAATTTATT GAT AATAA-TTATGGGCTTTTT AAAGTGAATTGACTT TERM 3968 3605470 - 3605441 - T 100 -10.3 -5.02287 | gap 1, opp_overlap 3605441, overlap 3605436 3605434 GAGAAAAAGATAAAA GCCCATAATTTATT GAT AATAA-TTATGGGC TTTTTAAAGTGAATT TERM 3969 3605441 - 3605470 + T 100 -10.3 -4.63184 | gap 1, opp_overlap 3605441 3605436 3605434 GAGAAAAAGATAAAA GCCCATAATTTATT GAT AATAA-TTATGGGC TTTTTAAAGTGAATT YPDSF_3166 3606877 - 3605489 - | transport protein TERM 3970 3605682 - 3605671 - G 78 -5.8 -4.84363 | opp_overlap 3605670 TTAAACCACCAAAAA TGGC ATAG GCCA CATTGTACGAGAAAG TERM 3971 3605847 - 3605837 - G 74 -6.8 -4.37092 | ATTGGTGTGATAAAA CGAC CAT GTCG ACATCGCCAGCATCA mogA 3607592 - 3607005 - | molybdenum cofactor biosynthesis protein YPDSF_3168 3607836 - 3607678 - | hypothetical protein TERM 3972 3607837 - 3607822 - G 100 -10.4 -5.45652 | opp_overlap 3607822 ATCGGCAATAAAAAA GGTGGC TTGC GCCACC TCATTCAGATACCGA YPDSF_3169 3608833 - 3607880 - | transaldolase B TERM 3973 3608171 - 3608188 + g 100 -7 -5.32882 | GCTTGCACCCATCAC CACGGT CTTATA ACCGTG TTTTTTGTAGTACTG YPDSF_3170 3609082 - 3608900 - | hypothetical protein YPDSF_3171 3609362 - 3610141 + | hypothetical protein TERM 3974 3611010 - 3610982 - T 74 -4.6 -4.74801 | CAATGCCATCAAAAA TGCCCGCA TTTGTGCAAAGTC TGCGGGCA AATCATGGGATAGCA YPDSF_3172 3612247 - 3610958 - | threonine synthase TERM 3975 3612081 - 3612066 - G 73 -5.4 -4.73613 | gap 1 TCACTACCAATAAAA GCCGACA GAA TG-CGGC TACTACGGGTCACAA YPDSF_3173 3613180 - 3612251 - | homoserine kinase TERM 3976 3612900 - 3612879 - G 71 -10.9 -3.13164 | gap 1 CCGGCAACCACTGAA CAGGCGCTGG AAC CCAGC-CCTG AACCGATCGGCATAT thrA 3615642 - 3613183 - | bifunctional aspartokinase I/homeserine dehydrogenase I TERM 3977 3615713 - 3615735 + H 100 -12.7 -5.57729 | opp_overlap 3615713 TGATTGAAAAAAAAA GCCCGCACT GTCTA GGTGCGGGC TTTTTTCTGTTGTTT TERM 3978 3615735 - 3615713 - H 100 -12 -6.11644 | opp_overlap 3615713 TGATTGAAAAAAAAA GCCCGCAC TGTCTAG GTGCGGGC TTTTTTCTGTTGTTT YPDSF_3175 3616474 - 3616647 + | hypothetical protein YPDSF_3176 3616746 - 3617462 + | two-component response regulator TERM 3979 3617509 - 3617486 - T 70 -7.4 -3.76607 | opp_overlap 3617488, overlap 3617488 GAATAGAGACGGAAA GAGCCAGCAC ACAG ATGCTGGCTT TTTTGTTTTTATATC TERM 3980 3617488 - 3617507 + T 100 -9.3 -5.98675 | opp_overlap 3617486 3617488 ATAGAGACGGAAAGA GCCAGCA CACAGA TGCTGGC TTTTTTGTTTTTATA TERM 3981 3617507 - 3617488 - T 78 -10 -3.45632 | opp_overlap 3617488, overlap 3617486 ATAGAGACGGAAAGA GCCAGCAC ACAG ATGCTGGC TTTTTTGTTTTTATA YPDSF_3177 3618103 - 3617636 - | hypothetical protein YPDSF_3178 3618329 - 3619195 + | right origin-binding protein YPDSF_3179 3619839 - 3619192 - | phosphoglycerate mutase TERM 3982 3619908 - 3619878 - H 71 -4.8 -4.65512 | opp_overlap 3619878 3619877, overlap 3619873 AAAATAAGCACAAAA CCTATCTGAGATAA AAC CTATTTTAGATAGG CTTTAAAGGATATTC YPDSF_3180 3619933 - 3620475 + | NTPase YPDSF_3181 3620864 - 3620472 - | Trp operon repressor YPDSF_3182 3623019 - 3621100 - | lytic murein transglycosylase TERM 3983 3623729 - 3623712 - g 70 -3.3 -4.7629 | overlap 3623714 3623723 GGATTAAGCCAAAAA GAGGCAC AAGA GCGCCTG GCGCAATATGGTCCC YPDSF_3183 3623589 - 3626315 + | cation-transporting P-type ATPase TERM 3984 3626366 - 3626336 - f 100 -15.4 -5.1523 | opp_overlap 3626336 3626361 GTCAGAAGAGAAAAA GCCCCGGAGCAG TCCAGCC CAGCTCCGGGGC TTTTGAGGTAAATAA TERM 3985 3626336 - 3626366 + F 100 -15.4 -4.14739 | opp_overlap 3626336, overlap 3626361 GTCAGAAGAGAAAAA GCCCCGGAGCAG TCCAGCC CAGCTCCGGGGC TTTTGAGGTAAATAA TERM 3986 3626506 - 3626522 + F 84 -2.9 -5.59879 | opp_overlap 3626506 ACTACCTGACAAAAA CCCGG AAAACAG TCGGG TTTTTTATATTTCTA TERM 3987 3626573 - 3626553 - f 72 -6.3 -4.34263 | overlap 3626549 3626547 3626558 3626565 TTTCAATAACATAAA TAAGATTTA AGA TAAATCTCA AATTTACGATGATAT YPDSF_3184 3626690 - 3627313 + | hypothetical protein TERM 3988 3627531 - 3627544 + G 70 -3.1 -4.77036 | gap 1 CATCAGTTATACCAC CGA-GG CCG CCGTCG TTTTTGGTGATAACG TERM 3989 3627668 - 3627636 - g 78 -10 -3.90766 | CATTGATAAACATAA TCGTCAGATAGC TTACTGGGC GCTACCTGACGA TGGGCCTATCCATCA YPDSF_3185 3627310 - 3628611 + | hypothetical protein YPDSF_3186 3628626 - 3629123 + | lipoprotein TERM 3990 3629137 - 3629158 + F 90 -10.9 -4.05926 | AACGTCCTTTATTTA CCGGTTTGC GGCT GTAAACCGG TTTCTGCCTTTATTC TERM 3991 3630075 - 3630061 - g 89 -2.1 -5.7946 | gap 1 GCTGGAACAAAAAAA TGC-CC GTCT GGCGCA AGAAGCCTCTTCTGA YPDSF_3187 3629306 - 3630973 + | putative ABC transporter ATP-binding protein TERM 3992 3631121 - 3631092 - T 70 -9.3 -2.88861 | opp_overlap 3631098, overlap 3631097 3631098 TAGTAGCCTGACAGA TAGAAGGGCCTGC AATC GCAGGCCTTTTTA GTCAGGGTATTTCGC TERM 3993 3631116 - 3631097 - T 78 -9.2 -3.64198 | opp_overlap 3631098, overlap 3631092 3631098 GCCTGACAGATAGAA GGGCCTGC AATC GCAGGCCT TTTTAGTCAGGGTAT TERM 3994 3631115 - 3631098 - T 89 -12.7 -2.78197 | opp_overlap 3631098, overlap 3631097 3631092 CCTGACAGATAGAAG GGCCTGC AATC GCAGGCC TTTTTAGTCAGGGTA TERM 3995 3631098 - 3631115 + T 100 -12.7 -4.72986 | opp_overlap 3631098 3631097 3631092 CCTGACAGATAGAAG GGCCTGC AATC GCAGGCC TTTTTAGTCAGGGTA YPDSF_3188 3631625 - 3631119 - | hypothetical protein YPDSF_3189 3632158 - 3631520 - | hypothetical protein TERM 3996 3632180 - 3632208 + r 73 -8.2 -3.72695 | overlap 3632183 3632193 CTCCCAACCGGAGAG TGAGCCGATTAG CCTCA TTATTCGGCTCA TTTGGTGAGCCGAAT TERM 3997 3632183 - 3632239 + r 76 -10.9 -2.67992 | overlap 3632180 3632193 3632214 CCAACCGGAGAGTGA GCCGATTAGCCTCATTATTCGGCTCAT TTG GTGAGCCGAATAGCCAGTATATTCGGC TCATGTGATGATATC TERM 3998 3632193 - 3632229 + r 72 -9.5 -3.09289 | overlap 3632180 3632183 3632214 AGTGAGCCGATTAGC CTCATTATTCGGCTCAT TTG GTGAGCCGAATAGCCAG TATATTCGGCTCATG TERM 3999 3632214 - 3632242 + r 83 -11.9 -2.84634 | overlap 3632193 3632183 ATTCGGCTCATTTGG TGAGCCGAATA GCCAGTA TATTCGGCTCA TGTGATGATATCCAG YPDSF_3190 3633586 - 3632315 - | nicotinamide-nucleotide adenylyltransferase TERM 4000 3633528 - 3633544 + g 73 -2.9 -4.93547 | overlap 3633529 CTGGCCTCAGCCACC TGCTGTA AGG TGCAGCC TTTTTGCTTAATTGC TERM 4001 3633635 - 3633622 - R 71 -4.5 -4.74052 | ACTAAACAAAAATAA CACAG TATG CTGCG GGATTGGCACTATTA YPDSF_3191 3635127 - 3633745 - | DNA repair protein RadA TERM 4002 3634338 - 3634351 + g 76 -5.2 -4.87665 | CACCCAGTTCGTTAA CCGC ACCAAA GCGG TTTTTGTGGCTACGC serB 3636195 - 3635215 - | phosphoserine phosphatase TERM 4003 3636387 - 3636369 - H 73 -8.8 -3.51597 | overlap 3636370 AAGGGTGAATCAGAA CCGCTGCG TCA CGCAGCAA CATCAAGTATGCAGG TERM 4004 3636386 - 3636370 - H 71 -10.1 -2.70476 | overlap 3636369 AGGGTGAATCAGAAC CGCTGCG TCA CGCAGCA ACATCAAGTATGCAG YPDSF_3193 3636427 - 3637128 + | hypothetical protein TERM 4005 3637202 - 3637167 - T 79 -7.6 -4.31293 | overlap 3637171 TCAGAGAGGAATAAA TCAATTCAGCGGCAGA GATC TCTACCGCTGAAGAAA GAAAAAACCGCTGGA TERM 4006 3637198 - 3637171 - T 100 -15 -3.71527 | overlap 3637167 AGAGGAATAAATCAA TTCAGCGGCAGA GATC TCTACCGCTGAA GAAAGAAAAAACCGC deoD 3637959 - 3637240 - | purine nucleoside phosphorylase YPDSF_3195 3639307 - 3638084 - | phosphopentomutase deoA 3640854 - 3639439 - | thymidine phosphorylase YPDSF_3197 3641679 - 3640882 - | deoxyribose-phosphate aldolase TERM 4007 3642067 - 3642082 + r 76 -7.6 -4.21439 | ATTTGAGCACGTTAG CACATC ATGA GATGTG TTTATCTTCACATTA TERM 4008 3642180 - 3642206 + r 79 -11 -3.15544 | opp_overlap 3642202 TCTATTGGCCCCGAT TACGCTATTCGT ATC AAGAATAGCGTA TTGGTGAGAATACGC TERM 4009 3642232 - 3642254 + r 83 -12.1 -2.61383 | opp_overlap 3642231, overlap 3642231 TACGCCTGATAGCAT GTGCCGTTT GACAA AAACGGCAC CTTATACATCACAGT YPDSF_3198 3643366 - 3642263 - | Na+ dependent nucleoside transporter-family protein TERM 4010 3643784 - 3643810 + r 72 -10.1 -2.88849 | gap 1, opp_overlap 3643773, overlap 3643779 3643785 ACATCCATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCTCTGCC TERM 4011 3643785 - 3643811 + r 84 -10.1 -3.82218 | gap 1, opp_overlap 3643773, overlap 3643779 3643784 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCTCTGCCT YPDSF_3199 3644877 - 3644068 - | metalloenzyme YPDSF_3200 3646161 - 3644893 - | hypothetical protein YPDSF_3201 3646399 - 3646238 - | hypothetical protein TERM 4012 3646448 - 3646427 - R 72 -8 -3.82946 | opp_overlap 3646426 3646427 CCAGTTTAAAGATAA GGTGCCTG ATTAAA CAGACACC CTTTCATTTGGCTCT YPDSF_3202 3647180 - 3646566 - | periplasmic protein prfC 3649096 - 3647507 - | peptide chain release factor 3 TERM 4013 3648643 - 3648667 + g 79 -9.3 -4.2461 | CATCCAGAACTTCCA TTGGATCACGA ATT TCGCGGTCCAA TTTGTTCATAAAGGT TERM 4014 3648878 - 3648904 + g 82 -6.6 -4.81851 | opp_overlap 3648869, overlap 3648863 3648862 CGGAAACTGCATTAC CGACGTGGTA ATGGAGA TACCGCGTTG TTTTTCCATTTCCAT TERM 4015 3649294 - 3649270 - R 84 -3.6 -5.43329 | gap 2, opp_overlap 3649290, overlap 3649271 AAAAACAAAATAAAA CGGCGCTATGCC ATT GGCA-A-CGCCA TCATAATGGCATCTT rimI 3649760 - 3649275 - | ribosomal-protein-alanine N-acetyltransferase TERM 4016 3649603 - 3649627 + g 80 -4.2 -5.09895 | TTAAAATTGAGGTAC CGGTCGCC CTGATTACT GGCGAACG TTTTTTCCGTCCATG TERM 4017 3649787 - 3649770 - H 75 -8.4 -3.87815 | opp_overlap 3649763 3649770 CCGCATCTTGATAAA GCCCAG CTAATT CTGGGC TATGTAATTGTGCAC TERM 4018 3650319 - 3650305 - g 70 -10 -3.24924 | opp_overlap 3650304 3650305, overlap 3650303 CGGTGATTTACAAGA TGCGCT GCC AGCGCA ATTTGATGCAGCCGG TERM 4019 3651132 - 3651160 + G 77 -9.5 -3.72576 | TAGCGAACTCCTTCC TGCCGTATCCTGC CTT GCTGGATGCCGCA TTTGGTAGCCACGAA rsmC 3650213 - 3651256 + | 16S ribosomal RNA m2G1207 methyltransferase YPDSF_3206 3652056 - 3651769 - | hypothetical protein TERM 4020 3651861 - 3651847 - G 83 -5.6 -5.1356 | TGGCAGTAACAAAAA GTGCCG CAA CCGCAC GTGGTACAACATGCT YPDSF_3207 3652350 - 3653522 + | HmsT protein YPDSF_3208 3655148 - 3654063 - | pectinesterase YPDSF_3209 3655607 - 3655804 + | hypothetical protein YPDSF_3210 3655951 - 3656283 + | hypothetical protein TERM 4021 3656604 - 3656581 - T 100 -11 -5.75342 | GTTCGTCAAAAAAAA CAGCCCCG TGACTGAC CGGGGCTG CTGAAATTACTTTTA YPDSF_3211 3659730 - 3656644 - | multi-drug efflux protein TERM 4022 3657920 - 3657910 - G 74 -8.2 -3.9712 | GTAGGTCAGCATAAA GCGC ATT GCGC CCTGACCTATGGTTG TERM 4023 3658196 - 3658212 + g 70 -8.7 -3.56099 | opp_overlap 3658195 3658186 3658196, overlap 3658186 3658199 TAATAGCGGAATAAC CAGCCGT CAT ACGGTTG TTTAACCGGCTTATC TERM 4024 3658233 - 3658245 + g 79 -5.5 -4.93365 | CCGGCTTATCCGCAT CAGCT TCA GGCTG TTTTTGGTTCTGGAA YPDSF_3212 3660812 - 3659730 - | lipoprotein YPDSF_3213 3661097 - 3660864 - | hypothetical protein TERM 4025 3661697 - 3661677 - R 100 -14 -3.67976 | GCCATTAACGTTAAA CGGCACCC ATAAA GGGTGCCG CGGCTAAACAAAAAA TERM 4026 3661798 - 3661824 + r 70 -7.2 -3.74872 | gap 1, opp_overlap 3661786, overlap 3661797 TATCCATGTAGGCTC GAG-CCGCGCC CTCCCT GGCGCGGACGC TTTACTCCCCTGCCT YPDSF_3214 3663139 - 3661907 - | O-antigen biosynthesis protein TERM 4027 3662306 - 3662295 - G 73 -5.8 -4.5442 | GCTTCAACCACAAAA GCAG AACG CTGC CCCATGGAGGAATTA TERM 4028 3663037 - 3663019 - G 70 -4.6 -4.59414 | TGATAATAATCAAAA CCAATGAA ACA CTCATTAG CTGATTATTCGTTGG YPDSF_3215 3664380 - 3663187 - | lipopolysaccharide core biosynthesis protein TERM 4029 3663947 - 3663935 - G 71 -6.9 -4.15044 | GTGGGTTTTAACAAA CGGCA ATA CGCCG CAGCCCGCCATTGAT TERM 4030 3664003 - 3664039 + g 70 -8 -3.79747 | overlap 3664004 ATGTTGTTTTTTTAG GGCGCTAAACAGTG CTTTTTCGC CACTGATTTGCGCC TTTAATCCTGCATGC TERM 4031 3664578 - 3664612 + r 100 -10.7 -4.29928 | gap 1, opp_overlap 3664553 ACGCAGCACGTGACG GCGGCGAGCATTGCCC CGAA GCGCAA-GCTGGCCGC TTTTCGCTATTAATT YPDSF_3216 3666288 - 3664696 - | autoinducer-2 (AI-2) kinase YPDSF_3217 3667379 - 3666459 - | transcriptional repressor TERM 4032 3667356 - 3667344 - G 70 -3.3 -4.77567 | overlap 3667345 ATCGTGATAATAAAA CCACG CAA CGCGA GCGAGCAGTTCCTCT YPDSF_3218 3667396 - 3667578 + | membrane protein TERM 4033 3668802 - 3668785 - g 79 -9.1 -4.26076 | opp_overlap 3668794, overlap 3668773 TCACGGCGATGAAAA CCGCCAA TCGC CTGGCGG CGGGCTTAGTGTATT YPDSF_3219 3667782 - 3669365 + | ABC transporter ATP-binding protein YPDSF_3220 3669359 - 3670414 + | ABC transporter permease protein YPDSF_3221 3670411 - 3671412 + | ABC transporter permease protein YPDSF_3222 3671485 - 3672504 + | periplasmic solute-binding protein TERM 4034 3672671 - 3672686 + G 71 -5.4 -4.56597 | gap 1, opp_overlap 3672671, overlap 3672673 GATTGGGGAATGCAA TCC-CGC CTG GCGCGGA TTTTTAACCCGAAAA TERM 4035 3672963 - 3672983 + G 78 -12.5 -3.0094 | CTGTACGGCTCAATG CCTGCGCGG TCG CCGCACAGG TGTATATCGGTACGG YPDSF_3223 3672560 - 3673435 + | aldolase YPDSF_3224 3673499 - 3673789 + | autoinducer-2 (AI-2) modifying protein LsrG YPDSF_3225 3674112 - 3674603 + | hypothetical protein YPDSF_3226 3677223 - 3674665 - | phosphoenolpyruvate-protein phosphotransferase TERM 4036 3674972 - 3674958 - G 76 -4.2 -5.05782 | ATCCAGTGGAAAAAA GGGC TTCTCGC GCCC ACACATCCGCAGCCA TERM 4037 3677392 - 3677405 + H 78 -5.3 -4.91511 | TCATTGCCGGGAAGT TGAGA TGGC TCTCA TTTTTCTGATGACAT YPDSF_3227 3677588 - 3678670 + | putative fructose-like permease EIIC subunit 2 TERM 4038 3678888 - 3678909 + F 95 -13.1 -3.15544 | overlap 3678905 TGCTAGCCCGCAGGG TGAGCCTCA AGGA TGAGGCTCA TTAGTCCCGATGAGC YPDSF_3228 3679011 - 3679331 + | putative fructose-like phosphotransferase EIIB subunit 2 YPDSF_3229 3679424 - 3679768 + | putative fructose-like phosphotransferase EIIB subunit 3 YPDSF_3230 3680636 - 3679761 - | transcriptional regulator TERM 4039 3680589 - 3680608 + g 77 -13.6 -2.55544 | opp_overlap 3680587 3680584, overlap 3680584 ATGGTGAATACTATT CGGCTCTG ATAC CAGAGCCG TCAGTTGACTGATAA YPDSF_3231 3681174 - 3680638 - | hypothetical protein YPDSF_3232 3681902 - 3683098 + | hypothetical protein YPDSF_3233 3683109 - 3684155 + | M48 peptidase family protein YPDSF_3234 3685455 - 3684301 - | hypothetical protein YPDSF_3235 3686864 - 3685452 - | hypothetical protein TERM 4040 3687310 - 3687292 - H 70 -8 -3.64487 | TGACACTGGTAAGAA CCACCCGC ACG GCGGAAGG AACTGCCCACGCAGG TERM 4041 3687389 - 3687399 + H 71 -6.8 -4.12188 | opp_overlap 3687388, overlap 3687373 CCGCCGGAAAACAGG CGAG ATT CTCG TTTTCAGAGTAGTAA YPDSF_3237 3687481 - 3687768 + | hypothetical protein YPDSF_3238 3689485 - 3688112 - | hypothetical protein YPDSF_3239 3690179 - 3689457 - | hypothetical protein TERM 4042 3690001 - 3690016 + gr 74 -7.6 -4.04188 | opp_overlap 3689998 TCTACCGACATACCG TTTCCG TAAT CGGAAA TTATTATCTTTAACT YPDSF_3240 3691308 - 3690229 - | modification methylase TERM 4043 3690270 - 3690280 + g 73 -5.4 -4.73388 | overlap 3690266 CTTTATCCATCGTAT TAGC AAT GCTA TTTTTCATCGCCATT YPDSF_3241 3691693 - 3691956 + | transposase TERM 4044 3692365 - 3692350 - T 100 -6.8 -5.81412 | opp_overlap 3692350 TTTAGGCAAAAAAAA GCCACC TTGC GGTGAC TTAATTTTCATACTA YPDSF_3242 3693894 - 3692578 - | hypothetical protein YPDSF_3243 3695954 - 3693891 - | hypothetical protein TERM 4045 3694085 - 3694096 + g 79 -7.2 -4.58466 | ACACGAACTGTAGCT GCGG GTTT CCGC TTTTCTGATTGTCGC TERM 4046 3695874 - 3695887 + g 70 -9.5 -3.25762 | overlap 3695872 CTGACGATAGTGTTT GCCCC AGTC GGGGC TGTATTGATTATTTT TERM 4047 3696066 - 3696084 + H 100 -13.2 -4.01078 | CCAGGGGGTAATCTG CTCTCCTG ATT CAGGAGAG TTTATGGTCACTTTT YPDSF_3244 3696088 - 3697110 + | transposase TERM 4048 3697191 - 3697177 - g 77 -11.4 -3.3506 | overlap 3697168 TGGAAAGCCTTATAA GCGCAG CGC CTGCGC TGTCACAACAGGCAG YPDSF_3245 3697110 - 3697889 + | transposase/IS protein YPDSF_3246 3699049 - 3697940 - | hypothetical protein TERM 4049 3698054 - 3698079 + g 82 -11.3 -3.68619 | TAACTCTGAGCGGTT TTGCATCAGAG CATC CTCTGATGTAA TTTCAGTAAATTCCA YPDSF_3247 3701024 - 3699042 - | hypothetical protein TERM 4050 3699345 - 3699323 - G 83 -9.2 -4.4261 | opp_overlap 3699323, overlap 3699332 CTGGTAAGAGTAAAA TTGACGCAAC ATG ATTGCGCCAA TCTTGAAATTCCTGC TERM 4051 3700662 - 3700628 - G 70 -8 -3.70902 | gap 1 CTCGGTACAGGCAAA TCAGCAACAGTGTCA AGGAAG TGAC-CCGCTGCTGA CCATCAATTAAGTAG TERM 4052 3701089 - 3701065 - R 100 -8 -5.39755 | CACAATTAGAAAAAA TAAGGCATAT CAGAT ACATGCCTTA CAGAAACTTTTTTTA YPDSF_3248 3702365 - 3701106 - | integrase TERM 4053 3701344 - 3701323 - G 70 -8.7 -3.57128 | overlap 3701338 ATCAATGAACTACAA GCCATGGTT CTGA AACCGTGGC CACAGACTTCAACTT TERM 4054 3702547 - 3702532 - R 91 -6.8 -5.47218 | opp_overlap 3702532 TTTTAGGCAAAAAAA GCCACC TTGC GGTGAC TTAATTTTCATACTA YPDSF_3249 3703829 - 3702753 - | hypothetical protein TERM 4055 3703211 - 3703228 + g 73 -3.4 -5.0095 | gap 1 AATCAGATTCATCGA CCT-GCG ATAAC CGCCAGG TTTTATTGTCTTTTT YPDSF_3250 3704923 - 3703829 - | hypothetical protein YPDSF_3251 3705203 - 3706714 + | leucyl aminopeptidase TERM 4056 3706828 - 3706845 + F 95 -11.3 -3.80625 | TTGTTAGCAGTCTGA GGGCACA TTTT TGTGCCC TTTACGTTGTAGAGA YPDSF_3252 3706865 - 3707314 + | DNA polymerase III subunit chi valS 3707327 - 3710224 + | valyl-tRNA synthetase TERM 4057 3710251 - 3710289 + F 100 -14.7 -4.66833 | overlap 3710252 ATCAGTCAGTCGTCA CCAGGGGCCATGATAAT TATTC ACTATCATGGCCCCTGC TTTTTACCATTGCAC TERM 4058 3710252 - 3710288 + F 100 -18.2 -3.39618 | overlap 3710251 TCAGTCAGTCGTCAC CAGGGGCCATGATAAT TATTC ACTATCATGGCCCCTG CTTTTTACCATTGCA YPDSF_3254 3710367 - 3710870 + | acetyltransferase YPDSF_3255 3711808 - 3711377 - | hypothetical protein YPDSF_3256 3712020 - 3713027 + | ornithine carbamoyltransferase subunit I YPDSF_3257 3713792 - 3713334 - | hypothetical protein TERM 4059 3714156 - 3714130 - H 84 -10.1 -3.82218 | gap 1, opp_overlap 3714139, overlap 3714131 3714146 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 4060 3714157 - 3714131 - H 72 -10.1 -2.88849 | gap 1, opp_overlap 3714139, overlap 3714130 3714146 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT TERM 4061 3714239 - 3714255 + H 75 -5.2 -4.79352 | CAATAACCTCATCAT TATTCC TTTAC GGAATA TTTTATTATCACTAA TERM 4062 3715158 - 3715138 - g 70 -3.2 -4.78107 | gap 1 TATTATTATTAAAAA CGTGC-CTG ACCC CAGTGCCCG CCGCCTGTTAATTCA YPDSF_3258 3714431 - 3715603 + | hypothetical protein YPDSF_3259 3715612 - 3715998 + | ABC transporter, periplasmic oligo-dipeptide/nickel binding protein TERM 4063 3716111 - 3716142 + G 76 -4.3 -4.94243 | opp_overlap 3716111 3716113 3716116, overlap 3716113 3716116 GTCTGTAGCATTAAA TACCACGCCGGGA ACCCCC TCCCGGCGTCATC TTTTGGTTTTTTTAC TERM 4064 3716140 - 3716113 - g 72 -9.8 -3.48024 | opp_overlap 3716113 3716111 3716116, overlap 3716111 3716116 CTGTAGCATTAAATA CCACGCCGGGAA CCCC CTCCCGGCGTCA TCTTTTGGTTTTTTT TERM 4065 3716116 - 3716137 + G 78 -13 -3.01018 | opp_overlap 3716113 3716111 3716116, overlap 3716113 3716111 TAGCATTAAATACCA CGCCGGGA ACCCCC TCCCGGCG TCATCTTTTGGTTTT TERM 4066 3716137 - 3716116 - g 80 -13.7 -2.88215 | opp_overlap 3716116 3716113 3716111, overlap 3716113 3716111 TAGCATTAAATACCA CGCCGGGAA CCCC CTCCCGGCG TCATCTTTTGGTTTT YPDSF_3260 3716094 - 3717143 + | transporter, permease protein YPDSF_3261 3717162 - 3717998 + | transporter, permease protein TERM 4067 3718416 - 3718383 - gf 86 -11.7 -3.28712 | opp_overlap 3718385, overlap 3718385 TCTGTTGCTGCATAA CACCCTTTCAAGCGC TGAT GCGCATGAACGGGTA TTAAATGCACTGGCC TERM 4068 3718385 - 3718414 + GF 86 -12.1 -3.09327 | opp_overlap 3718385 3718383 TGTTGCTGCATAACA CCCTTTCAAGCGC TGAT GCGCATGAACGGG TATTAAATGCACTGG TERM 4069 3718414 - 3718385 - gf 86 -12.1 -3.21276 | opp_overlap 3718385, overlap 3718383 TGTTGCTGCATAACA CCCTTTCAAGCGC TGAT GCGCATGAACGGG TATTAAATGCACTGG YPDSF_3262 3717961 - 3718869 + | ABC transporter transporter, ATP-binding protein YPDSF_3263 3718856 - 3719572 + | ABC transporter, ATP-binding protein TERM 4070 3719777 - 3719764 - f 75 -5.3 -4.82901 | CCCTCGCCATAAAAA TCACA ATTC TGTGA CGTACTGAACAGGGA TERM 4071 3719937 - 3719960 + F 78 -10.2 -3.24245 | overlap 3719940 AGCATCCACATCCCC CTCGCAGCCC TGAT GTGCTGCGGG TTGCCTTGTGGATAA TERM 4072 3720978 - 3720968 - g 76 -6.8 -4.56597 | GGGCTTGGGTAAAAA CCGT AAA ACGG CGGTATTCCCAAAAC YPDSF_3264 3720006 - 3722144 + | anaerobic ribonucleoside triphosphate reductase TERM 4073 3722256 - 3722227 - f 74 -9.2 -3.33492 | GTAGGTAGGCGACAA CCTCAGGCCTCG TCAATG CGAGGCCTGCTG ATGGGCTGAGTCACC nrdG 3722351 - 3722785 + | anaerobic ribonucleotide reductase-activating protein YPDSF_3266 3723113 - 3723838 + | putative transcriptional regulator TERM 4074 3723996 - 3724014 + G 87 -8 -4.79352 | overlap 3723997 AATTGCAGGCGCGGA TGGGGGCC ACC GGCCGCCG TTTTATTCTCGGTGA YPDSF_3267 3723839 - 3724315 + | PhnG protein phnH 3724315 - 3724941 + | carbon-phosphorus lyase complex subunit YPDSF_3269 3724941 - 3726119 + | PhnI protein YPDSF_3270 3726112 - 3726993 + | PhnJ protein phnK 3726993 - 3727784 + | phosphonates transport ATP-binding protein TERM 4075 3727963 - 3727932 - f 100 -12.4 -3.5393 | AGGACGTCGGCGAAA GGCGTCAACCTACA GGGA TGTAGGTTAAAGCC AGCCCGTAAAGCCGA TERM 4076 3728008 - 3727996 - f 71 -9.1 -3.30605 | opp_overlap 3727994 AGATGAAGAAGGGAA CCCAC GTA GTGGG CGTTGGATGTTGAGC TERM 4077 3728036 - 3728061 + F 81 -11.9 -2.52543 | gap 1, opp_overlap 3728028 3728027 AGCAAAGCCGCAGGT GCAGGAGGGGCG GCC TGCCC-TCCTGC TCGATTGCAGGCACT TERM 4078 3728787 - 3728776 - g 71 -7.2 -4.02051 | opp_overlap 3728775 3728776 3728784 GATGAAGCTAAACAA CGCG GTGC CGCG ATTGTCGGGATTTTC YPDSF_3272 3728173 - 3728892 + | phosphonates transport ATP-binding protein YPDSF_3273 3728889 - 3730025 + | PhnM protein YPDSF_3274 3730025 - 3730606 + | ribose 1,5-bisphosphokinase phnP 3730597 - 3731349 + | carbon-phosphorus lyase complex accessory protein YPDSF_3276 3732000 - 3731362 - | hypothetical protein YPDSF_3277 3732595 - 3732152 - | hypothetical protein YPDSF_3278 3733845 - 3732679 - | hypothetical protein TERM 4079 3733737 - 3733723 - G 73 -9.2 -3.67597 | CGCTTCACTCAATAA CCGACG TAA CGCCGG TTGCAGAGGTGAAAA YPDSF_3279 3734954 - 3733860 - | sugar ABC transporter, ATP-binding protein TERM 4080 3733999 - 3733989 - G 70 -8.2 -3.77209 | overlap 3733990 AAATACAGAGGTAAA GCGG CCC CCGC CCGTGCTGCAAAAGA TERM 4081 3734602 - 3734590 - G 70 -9.1 -3.5393 | opp_overlap 3734588 AGCAGCGCTTGTAAA CCGAG CAA CTCGG CGGTTGATTCGACCT TERM 4082 3734604 - 3734616 + g 71 -5.5 -4.4773 | ACCGAGCAACTCGGC GGTTG ATT CGACC TTTTGGTTAATATCA YPDSF_3280 3735805 - 3734966 - | sugar transport system, permease protein TERM 4083 3735831 - 3735841 + r 77 -4.6 -5.03314 | CGGCTCGGTTAGTAA CGGG CGA TCCG TTTTTTCAAGGTGAG YPDSF_3281 3736708 - 3735824 - | sugar transport system, permease protein TERM 4084 3736475 - 3736451 - G 72 -8.5 -3.95653 | AAAGAAGGCGATAAA CGCGGCCACCA CCA TGGTGACCAGG ACATATAACAACGTG YPDSF_3282 3738029 - 3736716 - | sugar binding protein YPDSF_3283 3738590 - 3739813 + | hypothetical protein TERM 4085 3741680 - 3741694 + G 76 -5.6 -4.75174 | overlap 3741682 ACCAACAACCAGCAG CTCAGG TCA CCTGTG TTTTTGACTTGAATG YPDSF_3284 3739837 - 3741855 + | hypothetical protein TERM 4086 3742338 - 3742322 - g 100 -8 -5.32396 | ACAGCAAAAAGAAAA GCTGGT GATTG ACCAGC CGAGGTTATTGACAA YPDSF_3285 3742086 - 3742373 + | GIY-YIG nuclease superfamily protein YPDSF_3286 3743054 - 3742548 - | acetyltransferase YPDSF_3287 3743650 - 3743048 - | lipid carrier protein TERM 4087 3743320 - 3743303 - GH 70 -7.7 -3.58343 | opp_overlap 3743302 GGCATCACCGCTAAA GCTGACA TCGG CGTCAGC CTGTTGGCTCACGAG YPDSF_3288 3743650 - 3743775 + | hypothetical protein TERM 4088 3743928 - 3743954 + G 71 -7.3 -4.11295 | gap 1, opp_overlap 3743927 3743926, overlap 3743946 TACCTGCATTAAAGG CCGCAATCGACA ATGG TGCCGAT-GCGG TTTATATCGGTTTGA YPDSF_3289 3743885 - 3744880 + | protease YPDSF_3290 3744892 - 3745770 + | hypothetical protein TERM 4089 3745786 - 3745830 + T 100 -16 -4.183 | gap 1, opp_overlap 3745793 3745796, overlap 3745793 ACGGCCTTGCCTTAT CAAGTAATAACAGGGAGGTCA TTGC TGGCCTCCCTGTTATT-CATG TTTATTAACGCTTAA TERM 4090 3745793 - 3745824 + T 100 -18.2 -3.54382 | opp_overlap 3745793 3745796, overlap 3745786 TGCCTTATCAAGTAA TAACAGGGAGGTCA TTGC TGGCCTCCCTGTTA TTCATGTTTATTAAC TERM 4091 3745824 - 3745793 - T 100 -16 -3.39895 | opp_overlap 3745793 3745786, overlap 3745796 TGCCTTATCAAGTAA TAACAGGGAGGTCA TTGC TGGCCTCCCTGTTA TTCATGTTTATTAAC TERM 4092 3745821 - 3745796 - T 100 -13.3 -3.83844 | opp_overlap 3745793 3745786, overlap 3745793 CTTATCAAGTAATAA CAGGGAGGTCA TTGC TGGCCTCCCTG TTATTCATGTTTATT YPDSF_3291 3747317 - 3745911 - | outer membrane efflux lipoprotein TERM 4093 3746869 - 3746887 + g 83 -3 -5.41143 | opp_overlap 3746869 3746872, overlap 3746870 AGATAGGTTTCAAAT TCAGCATG AGA CAAGCTGC TTTTTTTACCAAATA TERM 4094 3747040 - 3747074 + g 81 -13.6 -3.1247 | gap 1 ACCGTTGGTATCTGG GCGGCCCGTTGCACA CCATAT TGCGCA-CGGGCCGC TTCGATATCGGCAAT YPDSF_3292 3750444 - 3747319 - | multidrug efflux protein TERM 4095 3748778 - 3748765 - G 73 -5.9 -4.56597 | TTCGGTCGGTAAAAA GCCCG TTGG CAGGC GAATAAACAACACAC YPDSF_3293 3751608 - 3750448 - | multidrug efflux protein TERM 4096 3751141 - 3751151 + g 70 -2.4 -5.00884 | opp_overlap 3751128 GATACGCGCCGTTTC CAGC GCA GCAG TTTTTTCGGCCACAT TERM 4097 3751193 - 3751225 + g 70 -2 -4.9138 | TGCTGATAGCTGGTT TGG-GCGTCATCAGCA TCT TGCTGC-GACACACCA TTTTCTTTGGCTAAT YPDSF_3294 3752116 - 3753171 + | hypothetical protein TERM 4098 3753208 - 3753223 + T 82 -10.4 -3.72051 | opp_overlap 3753208 ACCGCCATAAAAAAA CCAGCC CGAA GGCTGG TTTGAGGTTGTTGAC TERM 4099 3753223 - 3753208 - T 100 -10.4 -5.61596 | opp_overlap 3753208 ACCGCCATAAAAAAA CCAGCC CGAA GGCTGG TTTGAGGTTGTTGAC TERM 4100 3753303 - 3753329 + T 72 -10.1 -2.88849 | gap 1, opp_overlap 3753292, overlap 3753298 3753304 ACATCCATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCTCTGCC TERM 4101 3753304 - 3753330 + T 84 -10.1 -3.82218 | gap 1, opp_overlap 3753292, overlap 3753298 3753303 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCTCTGCCT TERM 4102 3753394 - 3753409 + T 100 -10.4 -4.82855 | TGTCAGCAGTCTGAA CCAGCC CGAA GGCTGG TTTTTACGTTTAATC YPDSF_3295 3753737 - 3753426 - | transcriptional regulatory protein YPDSF_3296 3754345 - 3754172 - | hypothetical protein TERM 4103 3754313 - 3754328 + g 100 -10.4 -4.82855 | opp_overlap 3754313 ATAGCCATAAAAAAA CCAGCC CGAA GGCTGG TTTTTACGTTTAATC TERM 4104 3754328 - 3754313 - G 100 -10.4 -5.65177 | opp_overlap 3754313 ATAGCCATAAAAAAA CCAGCC CGAA GGCTGG TTTTTACGTTTAATC YPDSF_3297 3756359 - 3754365 - | ATP-dependent RNA helicase DeaD TERM 4105 3755568 - 3755586 + g 72 -3.8 -4.7497 | ACGCTCAAGGGCTTC TGCTACTT CCA AGGTCGCA TTTTTGGTACGTACG YPDSF_3298 3757430 - 3756546 - | lipoprotein NlpI TERM 4106 3756666 - 3756678 + g 73 -9.1 -3.78934 | opp_overlap 3756665 CGTCAGTTTGAACAG CACCG AAG CGGTG TTCTTGTCCCCCAGA TERM 4107 3757543 - 3757512 - R 100 -13.8 -3.48276 | opp_overlap 3757509 CCGCCCCTGAGATAA CACAGCCCCTTACC GATG AGCAAGGAGCTGTG GAATGACTTAATTAC TERM 4108 3757562 - 3757599 + r 100 -11.3 -4.0274 | TGACTTAATTACTCT GCTGCTGCTTCTGGTGC TTCT GCGTCAGGAGTAGTGGC TTCTTTGATGCTCAG YPDSF_3299 3759672 - 3757555 - | polynucleotide phosphorylase/polyadenylase TERM 4109 3759912 - 3759958 + H 100 -15.4 -3.05384 | gap 1, opp_overlap 3759917, overlap 3759917 3759922 AGGGGCCAACTTGCA CTGAACC-CCAGATCTTGGAT CTTTTT ATCCATGATCTGGAGGTTCGG TTCAATGAAACACCC TERM 4110 3759917 - 3759953 + H 77 -10.3 -3.19192 | gap 1, opp_overlap 3759917, overlap 3759912 3759922 CCAACTTGCACTGAA CC-CCAGATCTTGGAT CTTTTT ATCCATGATCTGGAGG TTCGGTTCAATGAAA TERM 4111 3759952 - 3759917 - H 93 -12.7 -3.06831 | opp_overlap 3759917 3759912 3759922 CCAACTTGCACTGAA CCCCAGATCTTGGAT CTTTTT ATCCATGATCTGGAG GTTCGGTTCAATGAA TERM 4112 3759922 - 3759932 + H 75 -5.4 -4.88736 | opp_overlap 3759917, overlap 3759917 3759912 TTGCACTGAACCCCA GATC TTG GATC TTTTTATCCATGATC TERM 4113 3761298 - 3761280 - g 71 -11 -2.73735 | overlap 3761270 3761268 3761291 AAACAGGCGGAATGA GTCCGGCA GAA TACCGGAC TCAGGTAGAAAAGCA YPDSF_3300 3760532 - 3761317 + | transposase for insertion sequence IS1661 TERM 4114 3761374 - 3761352 - T 71 -9 -3.32844 | GGGTTCAGTGCATAA GCGTGGCCCC CTT GGAACCCCGC GCTTTCGCACTATCG TERM 4115 3762090 - 3762114 + T 76 -7.9 -4.22524 | GAAACACGGTCACTA CGCGAGAAAAA CAA TTTTATTCGCG TTTCATTTTAACTAT YPDSF_3301 3762570 - 3762106 - | membrane protein TERM 4116 3764361 - 3764342 - g 72 -8.6 -3.90291 | gap 1, opp_overlap 3764359 ATCCGCCTAATTAAA GGCAGCCAC ATT GTGG-TGCC TCGGGTTCATAACCA TERM 4117 3764814 - 3764799 - g 71 -6.8 -4.2558 | gap 1 CAGCGTGGACTAAAA CCGGTGC CTT GC-CCGG TGGGGATATCGGCGG TERM 4118 3765154 - 3765140 - g 70 -4.2 -4.70659 | opp_overlap 3765143 GCGCACACTGAAAAA CAACAG GCG CTGCCG CTGGTTTCTTAATAG glpD 3763652 - 3765166 + | glycerol-3-phosphate dehydrogenase TERM 4119 3765255 - 3765284 + T 73 -3.6 -5.0538 | gap 2, opp_overlap 3765255 CAAGAAATTTAAAAA CCCTCTTCAATCGG ATAA CCGC--GAAGAGGG TTTTTTACGGTGGCA TERM 4120 3765284 - 3765255 - T 78 -5.8 -4.86939 | gap 2, opp_overlap 3765255 CAAGAAATTTAAAAA CCCTCTTCAATCGG ATAA CCG-C-GAAGAGGG TTTTTTACGGTGGCA YPDSF_3303 3767776 - 3765329 - | glycogen phosphorylase TERM 4121 3766006 - 3765996 - G 72 -8.2 -3.84406 | opp_overlap 3765996 TTGGCATTATAATAA GCCG AGG CGGC TTTACCGGCAAAAAT TERM 4122 3766358 - 3766383 + g 100 -11.1 -4.63218 | opp_overlap 3766361, overlap 3766336 GTTGGCTAACCCCAA CCAGCGCCGTG GTGT CACGCCGTTGG TTTTATTGCAGAAAC glgA 3769375 - 3767945 - | glycogen synthase glgC 3770873 - 3769443 - | glucose-1-phosphate adenylyltransferase YPDSF_3306 3772871 - 3770883 - | glycogen debranching enzyme TERM 4123 3770983 - 3770967 - G 74 -10.1 -3.63627 | GTCTGACACCCCAAA GGGAGGA ATC CCCTCCC ATTCCCCTTCAGGTA YPDSF_3307 3775056 - 3772873 - | glycogen branching enzyme YPDSF_3308 3775562 - 3777259 + | membrane protein TERM 4124 3777365 - 3777332 - T 75 -5.4 -4.90296 | opp_overlap 3777330 3777333 3777336, overlap 3777333 3777336 AAAACCCTATAAAAA TTAATGCCAGAG TATAACCCAC CTCTGGCATTAC TATTATTCCTGACAC TERM 4125 3777364 - 3777333 - T 73 -8.9 -3.52551 | opp_overlap 3777333 3777330 3777336, overlap 3777332 3777336 AAACCCTATAAAAAT TAATGCCAGAG TATAACCCAC CTCTGGCATTA CTATTATTCCTGACA YPDSF_3309 3791437 - 3777467 - | invasin TERM 4126 3782426 - 3782405 - G 72 -8 -3.90112 | GTTGGCCGAACTAAA GACCACCG CAGCAC CGGTGATC GGGTTGCCGTTAGCA TERM 4127 3783293 - 3783272 - G 72 -8 -3.90112 | GTTGGCCGAACTAAA GACCACCG CAGCAC CGGTGATC GGGTTGCCGTTAGCA TERM 4128 3786773 - 3786752 - G 72 -8 -3.90112 | GTTGGCCGAACTAAA GACCACCG CAGCAC CGGTGATC GGGTTGCCGTTAGCA TERM 4129 3787643 - 3787622 - G 72 -8 -3.90112 | GTTGGCCGAACTAAA GACCACCG CAGCAC CGGTGATC GGGTTGCCGTTAGCA TERM 4130 3788222 - 3788201 - G 72 -8 -3.90112 | GTTGGCCGAACTAAA GACCACCG CAGCAC CGGTGATC GGGTTGCCGTTAGCA TERM 4131 3792354 - 3792338 - R 75 -3.1 -5.08824 | TCTTCACGCAAAAAA TAAAAAA CCA TTTTCTA TACGGCATTCAATTT TERM 4132 3792683 - 3792664 - R 100 -10 -5.63645 | opp_overlap 3792664 3792662 3792657 TTAAAATATAAAAAA CCCTGACC ATAA GATCAGGG TGCTTTGTTGTTCTT YPDSF_3310 3793460 - 3793173 - | hypothetical protein YPDSF_3311 3793841 - 3793467 - | hypothetical protein YPDSF_3312 3794363 - 3794082 - | hypothetical protein TERM 4133 3794490 - 3794473 - R 100 -9.8 -4.60949 | CATACGATAAACAAA GCCCGC ACTCTG GCGGGC TTACGGGTCTTCCAC YPDSF_3313 3795635 - 3794532 - | aspartate-semialdehyde dehydrogenase TERM 4134 3796009 - 3796025 + G 79 -5.1 -4.93968 | overlap 3796011 TGACTGAGATGATTG CAGCAAC TGT GTTGCTA TTTTTAATTATGGAT TERM 4135 3796011 - 3796023 + G 71 -7.7 -4.08682 | overlap 3796009 ACTGAGATGATTGCA GCAAC TGT GTTGC TATTTTTAATTATGG YPDSF_3314 3795993 - 3796586 + | dITP- and XTP- hydrolyzing protein TERM 4136 3796671 - 3796657 - T 80 -2.8 -5.47399 | opp_overlap 3796657, overlap 3796670 TCAACGTCAAAAAAA CCAATT CAA AATGGG TCTTTGACTGCTGAC TERM 4137 3796803 - 3796816 + T 79 -8.1 -4.3534 | opp_overlap 3796797 TGTCAATAACCTCAA GCCTC TTCT GAGGC TTTTAATAATTAGAC YPDSF_3315 3797215 - 3796826 - | hypothetical protein TERM 4138 3796853 - 3796863 + g 80 -3.2 -5.3671 | ATCATCAGGGTAAGC GGCT TTG AGTC TTTTTTGCTTGTCTT YPDSF_3316 3797604 - 3797437 - | adhesin/hemolysin YPDSF_3317 3797834 - 3797601 - | hypothetical protein YPDSF_3318 3798519 - 3798016 - | gluconokinase YPDSF_3319 3798736 - 3800052 + | gluconate permease YPDSF_3320 3801139 - 3800144 - | gluconate utilization system Gnt-I transcriptional repressor TERM 4139 3801213 - 3801190 - R 71 -3.2 -4.93877 | gap 1, opp_overlap 3801190, overlap 3801185 TTCTAGCAAAGAAAA GGGTATAGC GTGATGT GC-ATACCC TTTTTAGTTAACGTA TERM 4140 3801190 - 3801213 + r 74 -4.6 -4.87291 | gap 1, opp_overlap 3801190 3801185 TTCTAGCAAAGAAAA GGGTATAGCGT GAT GTGC-ATACCC TTTTTAGTTAACGTA YPDSF_3321 3801963 - 3801268 - | hypothetical protein TERM 4141 3802204 - 3802188 - H 100 -9.4 -6.17292 | AAAGGCAAAAAAAAA GCCAGC ACCCG GCTGGC TAAGTAAACACTGGA YPDSF_3322 3802727 - 3803464 + | response regulator protein YPDSF_3323 3804640 - 3803633 - | PfkB family carbohydrate kinase TERM 4142 3804165 - 3804148 - G 76 -12.7 -2.62933 | overlap 3804136 CAAGCTGCGACATCA GCGCCAG TAGT CTGGCGC TACGAGTACCGTACT YPDSF_3324 3805510 - 3804650 - | hypothetical protein YPDSF_3325 3806219 - 3805536 - | hypothetical protein YPDSF_3326 3807238 - 3806294 - | sugar-binding transport protein YPDSF_3327 3808261 - 3807269 - | sugar transport system permease protein TERM 4143 3808219 - 3808194 - G 77 -9.9 -3.72695 | opp_overlap 3808213, overlap 3808205 ACGGTTTGCAGTAAA TCGCTAAAAAA CGCT TTTTTCAGCGA GGCCGATTTTGCCAC TERM 4144 3808218 - 3808205 - G 78 -3.8 -5.07107 | opp_overlap 3808213, overlap 3808194 TAAATCGCTAAAAAA CGCT TTTTTC AGCG AGGCCGATTTTGCCA YPDSF_3328 3809777 - 3808254 - | sugar transport ATP-binding protein TERM 4145 3810125 - 3810103 - R 72 -6.3 -4.37658 | gap 1 AAGCCGCTTACAAAA GCAG-GTCCA GGAG CGGACACTGC GCGATATGTCAAGCA YPDSF_3331 3814037 - 3812655 - | hypothetical protein TERM 4146 3813550 - 3813562 + g 76 -3.3 -5.14563 | opp_overlap 3813551, overlap 3813551 GAATCATCACAAAAA AGCTG CCC CAGCG TTTTTTCATGCCAGG TERM 4147 3813561 - 3813551 - G 100 -6.8 -5.33785 | opp_overlap 3813551 3813550 AATCATCACAAAAAA GCTG CCC CAGC GTTTTTTCATGCCAG YPDSF_3332 3814063 - 3815658 + | phosphate transport protein TERM 4148 3815774 - 3815754 - f 100 -8.9 -5.15167 | opp_overlap 3815754 GATGAGCAATAAAAA GGCGGCCTA AAT CAGGTCGCC TTTTTTGTGCCCAGA TERM 4149 3815754 - 3815774 + F 100 -10.4 -5.24129 | opp_overlap 3815754 GATGAGCAATAAAAA GGCGGCCT AAATC AGGTCGCC TTTTTTGTGCCCAGA TERM 4150 3815811 - 3815793 - f 100 -16 -4.36914 | opp_overlap 3815793 TTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC TERM 4151 3815793 - 3815811 + F 100 -16 -3.07307 | opp_overlap 3815793 TTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC YPDSF_3333 3815924 - 3816382 + | transposase for the IS1541 insertion element TERM 4152 3816460 - 3816484 + T 100 -9.9 -4.43642 | opp_overlap 3816463, overlap 3816462 3816463 ATAGGCGCATATGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTAATTCTTTT TERM 4153 3816462 - 3816482 + T 100 -12.5 -3.78931 | opp_overlap 3816463, overlap 3816460 3816463 AGGCGCATATGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTAATTCTT TERM 4154 3816463 - 3816481 + T 100 -16 -2.85732 | opp_overlap 3816463, overlap 3816462 3816460 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTAATTCT TERM 4155 3816481 - 3816463 - T 100 -16 -4.8048 | opp_overlap 3816463 3816462 3816460 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTAATTCT YPDSF_3334 3816850 - 3816515 - | universal stress protein UspB YPDSF_3335 3817558 - 3818004 + | universal stress protein A TERM 4156 3818052 - 3818032 - f 78 -9.6 -3.67976 | opp_overlap 3818032 TTGAGTAACGTTAAA CGCTCGCC TCTCC GGCGGGCG TTTTTGTGATAGACG TERM 4157 3818032 - 3818052 + F 100 -11.8 -4.91109 | opp_overlap 3818032 TTGAGTAACGTTAAA CGCTCGCC TCTCC GGCGGGCG TTTTTGTGATAGACG TERM 4158 3818817 - 3818805 - g 74 -4.9 -4.77036 | TGGCATGATGAAAAA GTTAT CCA ATAAC ACCGCTTGCGTCTTT YPDSF_3336 3818251 - 3819594 + | glutamate dehydrogenase YPDSF_3337 3819848 - 3821176 + | metalloprotease TERM 4159 3821251 - 3821236 - T 70 -6 -4.37092 | overlap 3821237 ATTCGGGTGAGAAAA TGCCGC TAAC GCGGCG GCGTCACCGATGAAG TERM 4160 3821250 - 3821237 - T 72 -9.5 -3.21934 | overlap 3821236 TTCGGGTGAGAAAAT GCCGC TAAC GCGGC GGCGTCACCGATGAA YPDSF_3338 3822011 - 3821241 - | putative methyltransferase TERM 4161 3821975 - 3821958 - G 93 -14.1 -3.7319 | opp_overlap 3821958 AGCCAGAATAGATAA GGCGCCG GGAT CGGCGCC TGCTTCAGATAATAA TERM 4162 3821958 - 3821975 + g 82 -14.1 -2.74012 | opp_overlap 3821958 AGCCAGAATAGATAA GGCGCCG GGAT CGGCGCC TGCTTCAGATAATAA YPDSF_3339 3824057 - 3822015 - | oligopeptidase A YPDSF_3340 3824203 - 3824358 + | hypothetical protein TERM 4163 3824907 - 3824897 - g 71 -5.4 -4.58773 | CGTATGAAATGAAAA CTGA TTA TCAG GATGTGGTGAAAGGT YPDSF_3341 3824386 - 3825228 + | hypothetical protein TERM 4164 3826152 - 3826142 - g 70 -4.6 -4.7254 | overlap 3826128 3826143 3826144 AGCGGTTATCAAAAA CGCC GAT GGCA GCCTGACGCTGCAAT TERM 4165 3826378 - 3826390 + G 82 -10.5 -3.86524 | overlap 3826389 CCCCGGTTGCCGTTG CGGCG GGC CGCCG TTTGTCCGAACGTCT YPDSF_3342 3825417 - 3826784 + | glutathione reductase TERM 4166 3826794 - 3826831 + F 95 -11.3 -3.89524 | gap 1, opp_overlap 3826785, overlap 3826796 AGATGATTTCGTTAC TATGGCCCGAACAGGCAG AGA CT-CCTGCACGGGCCATG TTTCTGAAATACACT TERM 4167 3826796 - 3826829 + F 89 -11.7 -3.53733 | gap 1, opp_overlap 3826785, overlap 3826794 ATGATTTCGTTACTA TGGCCCGAACAGGCAG AGA CT-CCTGCACGGGCCA TGTTTCTGAAATACA TERM 4168 3826849 - 3826875 + F 75 -5.9 -4.70583 | opp_overlap 3826849 TCTGAAATACACTAA GCCAGGTTG AAAATGAGC TAACCTGGC TTTTATCTTAATAGA TERM 4169 3827665 - 3827680 + G 71 -6 -4.36262 | opp_overlap 3827659, overlap 3827664 TGCGCAAATTGTATG CGCTGC TACA GCCGCG TTTTAGTCTGAATAT YPDSF_3343 3826977 - 3828104 + | regulatory protein YPDSF_3344 3828309 - 3828067 - | hypothetical protein TERM 4170 3828945 - 3828964 + GH 70 -9.2 -2.79679 | opp_overlap 3828955, overlap 3828953 3828955 GCGCTGCCTGCCTTT GGTGCAGC AATG GCGGCACC TCTGGTCGCCATCTT TERM 4171 3829294 - 3829311 + GH 71 -8.4 -3.40597 | opp_overlap 3829285, overlap 3829285 3829282 3829281 3829292 CAACCACGGCGGGCA CCGCAG TCGCTT CTGCGG TATTTAGCTCAACGC YPDSF_3345 3828282 - 3829550 + | GntP family permease YPDSF_3346 3829561 - 3830697 + | glycerate kinase TERM 4172 3830833 - 3830802 - T 70 -7.2 -3.74872 | opp_overlap 3830800 3830829, overlap 3830804 AGGGACTTTATCAAA TACCGACGGTCAGA TATC TCTGGCCGTTGGGA CATCCTATTTTCCAC TERM 4173 3830831 - 3830804 - T 78 -9.8 -3.4582 | opp_overlap 3830800 3830829, overlap 3830802 GGACTTTATCAAATA CCGACGGTCAGA TATC TCTGGCCGTTGG GACATCCTATTTTCC YPDSF_3347 3831449 - 3830943 - | hypothetical protein YPDSF_3348 3832014 - 3831517 - | hypothetical protein TERM 4174 3832003 - 3832013 + g 82 -4 -5.24291 | TAAGATATTGTATTT TGTT TTT AACA TTTTATTTTCGTTTT YPDSF_3349 3832885 - 3832016 - | hypothetical protein TERM 4175 3832357 - 3832391 + g 71 -5.3 -4.52589 | gap 1 TCATCATTCCTTTGT TATTGATAGG-ATAAT GACC ATTATTCCAATCAATA TTTTCTATCAAAGCA TERM 4176 3832960 - 3832936 - R 100 -12.1 -3.80625 | CCGTCATAACGCAAA GCGGCATCCAG TAA CAAGATGCCGC CCCAAATCATTATCA YPDSF_3350 3836185 - 3832973 - | putative autotransporter protein TERM 4177 3833662 - 3833672 + g 79 -6.8 -4.63527 | opp_overlap 3833646, overlap 3833646 3833645 CGCCAGTCACTTGAG TGCC TGC GGCA TTTTTGGCCTGATAG TERM 4178 3835052 - 3835064 + g 73 -2.7 -5.0538 | GTTATTCCCTTTAGT TATCA CCG TGGTA TTTTTTACGATAGCG TERM 4179 3836969 - 3836953 - g 83 -5.1 -5.08011 | AAAACCGGCAAAAAA GCCATCT CTC ATATGGC CTGCCTCAGTGATCG TERM 4180 3837645 - 3837634 - g 85 -3.6 -5.4756 | AAGCCGAAGAAAAAA GCGC TGTT ACGC GGAGCCCTCATTGCC YPDSF_3351 3836863 - 3837945 + | hypothetical protein TERM 4181 3838625 - 3838637 + G 76 -3.3 -5.1861 | TGGCAATAACCGCAC TACCC TCT GGGGA TTTTTTACTGCTGGC YPDSF_3352 3837949 - 3838746 + | CDP-diacylglycerol pyrophosphatase YPDSF_3353 3840940 - 3838751 - | hypothetical protein TERM 4182 3840516 - 3840498 - G 70 -9.6 -3.33151 | overlap 3840496 CGTTGCAAATGAATA TCTGGCTG CGT CAGCCAAA GGCGGGGGATACGAA TERM 4183 3841234 - 3841219 - R 80 -9 -3.98159 | CAGGAGAAGATGAAA GGCGAT CATT ATCGCC TTAGGGAGCGTTAGC YPDSF_3354 3842090 - 3841245 - | EAL domain-containing protein YPDSF_3355 3842174 - 3842509 + | tautomerase TERM 4184 3842582 - 3842564 - f 79 -3.2 -5.34555 | opp_overlap 3842565, overlap 3842557 3842565 TTACATCATAAAAAA TTTAAAAC ACC GTTTTAAT CCTATTGACTCTGGA YPDSF_3356 3842788 - 3843732 + | 2-dehydro-3-deoxygluconokinase TERM 4185 3843819 - 3843764 - T 86 -11.3 -3.38991 | gap 1, opp_overlap 3843772 3843818, overlap 3843762 AGGCCGCGAATAACA GACGTTAA-TGACCGATCGTTGCAGG ATAAA CCTACAGCCATCGGTCATTTTACGCC TGGCTAACGTGGCCT TERM 4186 3843772 - 3843810 + T 100 -12.5 -4.11692 | opp_overlap 3843764 3843762 AATAACAGACGTTAA TGACCGATCGTTGCAGG ATAAA CCTACAGCCATCGGTCA TTTTACGCCTGGCTA YPDSF_3357 3845395 - 3843896 - | insulinase family protease TERM 4187 3844234 - 3844256 + g 86 -7 -5.05601 | TACGCGCATAGGTGG CGAACAACTT ACT GAGTTGGTCG TTTTTCTGTGTCATC TERM 4188 3844870 - 3844839 - G 74 -8.6 -4.00042 | opp_overlap 3844842, overlap 3844842 TGGCCGATTAAAGAA GAACCTTTGAGGCG ATAA CGCCACCACGGTTC CTGAATATTTTGTGG TERM 4189 3845172 - 3845160 - G 73 -9.1 -3.77464 | opp_overlap 3845159 3845153 3845151 AGACGAGGCAGTAAA TGGGC AAA GCCCA CTTCCTGTGTATTTT TERM 4190 3845717 - 3845687 - R 100 -17.7 -2.9294 | overlap 3845705 GACATTATGCAGAGA CGCTACCAGTGAC AGCAA GCCACTGGTAGCG AATTGAAGGGAGAAA YPDSF_3358 3847049 - 3845760 - | C4-dicarboxylate transporter DctA TERM 4191 3847450 - 3847479 + r 76 -10.7 -2.71791 | opp_overlap 3847448 3847444, overlap 3847449 GGGATAGAACTTACA GGCTCCTGTGCAA TAAC TAGCACAGGAGCG GTTTACGGCAGCGAT YPDSF_3359 3847983 - 3847504 - | hypothetical protein TERM 4192 3847621 - 3847645 + g 70 -2.8 -4.84017 | opp_overlap 3847630, overlap 3847622 ATATTTGGCGTTGAT AGGCGAAAAG GTCAA CTTTTCACCC TTTTTGTCCGCAGTT TERM 4193 3850022 - 3849999 - R 72 -9.5 -3.14344 | opp_overlap 3849999 3850012 3850017 GACTCGGCCCATCAA GGGGCCTCG CCTCTT CGAGGCCGC AGCAAGCAGCCTTCC YPDSF_3362 3850775 - 3850071 - | hypothetical protein YPDSF_3363 3853601 - 3851415 - | biofilm formation regulator HmsP YPDSF_3364 3854643 - 3853744 - | endo-1,4-D-glucanase dppF 3856038 - 3854962 - | dipeptide transporter ATP-binding subunit dppD 3857057 - 3856035 - | dipeptide transporter ATP-binding subunit YPDSF_3367 3857921 - 3857124 - | dipeptide transport system permease protein YPDSF_3368 3858951 - 3857932 - | dipeptide transporter permease DppB TERM 4194 3858975 - 3859000 + r 75 -8.9 -3.64487 | opp_overlap 3858975 3858974 CTCTCTGTGTAGAAT GCCGGGCTGCT CATA GGCAACCTGGC TTATTAAACCTCTCC TERM 4195 3859219 - 3859186 - R 73 -5.9 -4.50159 | overlap 3859188 TTTAACCTAAATAAA TAGACCGATGAACGT TGAT ACGCACACCGGTCCG GTATAAGGGTAAAAT TERM 4196 3859217 - 3859188 - R 88 -10.7 -3.8535 | overlap 3859186 TAACCTAAATAAATA GACCGATGAACGT TGAT ACGCACACCGGTC CGGTATAAGGGTAAA YPDSF_3369 3860841 - 3859234 - | periplasmic dipeptide transport protein YPDSF_3370 3863189 - 3861510 - | hemolysin activator protein TERM 4197 3863347 - 3863326 - R 70 -3.7 -4.90918 | overlap 3863321 ACAAAATCAATAAAA GTTAGCCAC GAAA GCAACTAAC TTTAAATAAAAAATC YPDSF_3371 3864774 - 3863383 - | hypothetical protein TERM 4198 3865076 - 3865057 - R 100 -13.6 -5.63504 | opp_overlap 3865057 AATGGCACAAAAAAA CCCTGACG TTAC CGTCAGGG TTCTTAAATTTGGTC TERM 4199 3865057 - 3865076 + r 100 -13.6 -3.78904 | opp_overlap 3865057 AATGGCACAAAAAAA CCCTGACG TTAC CGTCAGGG TTCTTAAATTTGGTC TERM 4200 3865254 - 3865218 - R 70 -8.1 -3.62775 | gap 1, opp_overlap 3865221, overlap 3865219 3865244 ATCACTTTTTAATAA CCTGCGGATGACTGCT GTTAAA AGCA-TCACCCGCAGT GAAAATGGCCGCCTT TERM 4201 3865253 - 3865219 - R 81 -11.6 -2.77344 | gap 1, opp_overlap 3865221, overlap 3865218 3865244 TCACTTTTTAATAAC CTGCGGATGACTGCT GTTAAA AGCA-TCACCCGCAG TGAAAATGGCCGCCT YPDSF_3372 3866611 - 3865280 - | regulatory protein UhpC TERM 4202 3865483 - 3865463 - G 71 -6.7 -4.21351 | opp_overlap 3865466 AAATAGCCCAACAAA GCCGGTTGC AGC GCCAGCGGC ATCCTTATGAGAGCA YPDSF_3373 3868235 - 3866706 - | sensory histidine kinase UhpB TERM 4203 3867819 - 3867804 - G 70 -8.2 -3.69338 | opp_overlap 3867808, overlap 3867795 3867807 AACCAACCCTAATAA GAGCGC CATT GCGCCC TGCCCACTGGCTATC YPDSF_3374 3868822 - 3868232 - | two-component system response regulator TERM 4204 3868931 - 3868903 - R 74 -4.6 -4.81551 | gap 1, overlap 3868904 3868905 GAGGCACATCAAAAA TTGGGCCAGACTT GGGT AAGCCTGGCC-AG TTACGGCTAAATTGC TERM 4205 3868930 - 3868905 - R 71 -9.7 -2.68202 | overlap 3868904 3868903 GGCACATCAAAAATT GGGCCAGACTT GGGT AAGCCTGGCCA GTTACGGCTAAATTG YPDSF_3375 3870629 - 3868938 - | phosphoethanolamine transferase YPDSF_3376 3871479 - 3870700 - | transposase/IS protein TERM 4206 3871398 - 3871412 + g 77 -11.4 -3.3506 | overlap 3871411 CTGCCTGTTGTGACA GCGCAG GCG CTGCGC TTATAAGGCTTTCCA YPDSF_3377 3872501 - 3871479 - | transposase TERM 4207 3872523 - 3872505 - H 100 -13.2 -4.01078 | AAAAGTGACCATAAA CTCTCCTG AAT CAGGAGAG CAGATTACCCCCTGG YPDSF_3378 3872591 - 3873142 + | acetyltransferase TERM 4208 3873289 - 3873263 - f 91 -8 -4.8048 | opp_overlap 3873264, overlap 3873264 TGTCTACACCAAAAA CCAAGCTGCCTA TAA TATGCAGCTTGT TTCTTATCTGGAGTT TERM 4209 3873264 - 3873288 + F 100 -11.5 -4.39329 | opp_overlap 3873264 3873263 GTCTACACCAAAAAC CAAGCTGCCTA TAA TATGCAGCTTG TTTCTTATCTGGAGT TERM 4210 3873288 - 3873264 - f 89 -11.5 -3.47806 | opp_overlap 3873264, overlap 3873263 GTCTACACCAAAAAC CAAGCTGCCTA TAA TATGCAGCTTG TTTCTTATCTGGAGT TERM 4211 3873483 - 3873459 - g 73 -5.7 -4.55093 | TGACAGAAGAAGAAA TCGTTAAACTC AAA GGGATTAACGA AGACCTTTCATTAGA TERM 4212 3873802 - 3873788 - g 100 -8.6 -5.5604 | opp_overlap 3873788 CTAATGAAGAAAAAA GGATTC CCG GAATCC TATGATATGCATAAT YPDSF_3379 3873353 - 3874303 + | pantothenate kinase TERM 4213 3874311 - 3874328 + T 71 -9.9 -2.63723 | opp_overlap 3874308 3874305 3874301, overlap 3874310 GAAAATAATCTATAC GGGAGAT AGTT ATCTCCC ATTAATTAATCAGAC YPDSF_3380 3875297 - 3874338 - | biotin--protein ligase murB 3876331 - 3875294 - | UDP-N-acetylenolpyruvoylglucosamine reductase TERM 4214 3876776 - 3876758 - R 100 -8.1 -5.24989 | opp_overlap 3876750 3876758 GCACACAGCAAAAAA CCCACGC TTTGG GCATGGG GTCTTGGCTTTATTT TERM 4215 3877015 - 3877005 - R 74 -6.8 -4.27316 | opp_overlap 3877005 TCTCTCAATTCAAAA CACC TTC GGTG TTGTAAGGTTAAGCC TERM 4216 3878127 - 3878138 + r 74 -4.4 -5.06816 | CCACTTTCGTGTTTG CACA GTGC TGTG TTTTTATTAAACAGT TERM 4217 3878174 - 3878200 + r 70 -9.4 -2.75844 | opp_overlap 3878150 3878152, overlap 3878173 3878176 CCAGCTGGTATCTGC GACTGGCTTCAG CTC CAGGAGCTAGTC CTTTCACCTAACGCC TERM 4218 3878634 - 3878652 + r 82 -10.3 -3.57798 | overlap 3878627 CTTGGTCTTCCGGCG TGCGGGT TTTTC ACCCGCA TTATCGTTACTTATG hemG 3883001 - 3882468 - | protoporphyrinogen oxidase YPDSF_3383 3884474 - 3883023 - | potassium transporter TERM 4219 3883943 - 3883954 + g 81 -5.8 -4.95302 | opp_overlap 3883943 TAGCCGTTTCAGCAA TGCG GGGC CGCA TTTTATTATCTTTCA TERM 4220 3884234 - 3884215 - G 95 -5 -5.55769 | TCTGAGAATAAAAAA GGTAATGC CCCG ACACTACC CAACACCGTCCAAAA YPDSF_3384 3885125 - 3884514 - | hypothetical protein TERM 4221 3884981 - 3884962 - G 100 -11.4 -4.64676 | opp_overlap 3884960 3884956 GGACCGGCAACAAAA GCCCAGCA ATGA TGCCGGGC CGTTGGATGTTGTTG YPDSF_3385 3886456 - 3885125 - | proline dipeptidase TERM 4222 3886369 - 3886336 - G 74 -2.6 -5.1356 | overlap 3886337 3886338 GGTCATCAAGAAAAA GCCGCTG-TAATTCAC CAGA GTGAATCAGCAACG-C ATCTAATTGATGACG TERM 4223 3886502 - 3886528 + H 79 -8 -4.31835 | opp_overlap 3886503, overlap 3886503 TTTTTATCTTATCAT AGTCACCGAAAC CAT GTTTCGATGACG TTTATTCTACAAATT TERM 4224 3886527 - 3886503 - H 93 -13.7 -2.79796 | opp_overlap 3886503 3886502 TTTTATCTTATCATA GTCACCGAAAC CAT GTTTCGATGAC GTTTATTCTACAAAT TERM 4225 3886503 - 3886527 + H 84 -11.5 -3.18378 | opp_overlap 3886503, overlap 3886502 TTTTATCTTATCATA GTCACCGAAAC CAT GTTTCGATGAC GTTTATTCTACAAAT TERM 4226 3887045 - 3887062 + G 76 -8.5 -4.1899 | opp_overlap 3887034 3887033, overlap 3887037 AACTGCACCAGTGGC TGGTGTT CGCC AACACCA TTTTCAATCGACTGG TERM 4227 3888246 - 3888233 - g 74 -8.1 -4.05033 | opp_overlap 3888232 3888229 CTTACGCTACACAAA TGGGG AAAA CCCCA ATTGTTGTCAATGAT TERM 4228 3888931 - 3888943 + G 70 -9.1 -3.50335 | AGTTATTATCCTGTG GCAGC AGC GCTGC TTGATGTTTCTACCA fadB 3886783 - 3888972 + | multifunctional fatty acid oxidation complex subunit alpha TERM 4229 3889027 - 3889045 + G 79 -8 -4.33274 | TGCGTACACCGATGG GCCGCTCC AAA GGGGGGGC TTTTCGTCATGTACG fadA 3888984 - 3890147 + | 3-ketoacyl-CoA thiolase TERM 4230 3890275 - 3890293 + T 73 -8.8 -3.56814 | overlap 3890278 TTTAGTTGCTATTTC CCCGCC GGTCAGA GGCGGG CTTTTTATCGCTTTT TERM 4231 3890278 - 3890294 + T 82 -5.7 -4.97402 | overlap 3890275 AGTTGCTATTTCCCC GCCGGTC AGA GGCGGGC TTTTTATCGCTTTTA fre 3891008 - 3890307 - | FMN reductase YPDSF_3389 3892583 - 3891063 - | 3-octaprenyl-4-hydroxybenzoate decarboxylase rfaH 3892807 - 3893295 + | transcriptional activator RfaH TERM 4232 3893383 - 3893345 - T 73 -8.9 -3.56273 | opp_overlap 3893349 3893357, overlap 3893346 3893349 CTCATCATTATAGAA TTCATTCAGATAGGCGC AGTTA GTGCCTATCTGAATGCT GTGACTCTTAGTTAT TERM 4233 3893382 - 3893346 - T 88 -12.4 -2.73443 | opp_overlap 3893349 3893357, overlap 3893345 3893349 TCATCATTATAGAAT TCATTCAGATAGGCGC AGTTA GTGCCTATCTGAATGC TGTGACTCTTAGTTA TERM 4234 3893349 - 3893379 + T 100 -14.9 -2.66787 | opp_overlap 3893346 3893345 3893349, overlap 3893357 TCATTATAGAATTCA TTCAGATAGGCGC AGTTA GTGCCTATCTGAA TGCTGTGACTCTTAG TERM 4235 3893379 - 3893349 - T 88 -12.7 -2.64051 | opp_overlap 3893349 3893357, overlap 3893346 3893345 TCATTATAGAATTCA TTCAGATAGGCGC AGTTA GTGCCTATCTGAA TGCTGTGACTCTTAG YPDSF_3391 3894427 - 3893405 - | delta-aminolevulinic acid dehydratase TERM 4236 3894467 - 3894447 - R 86 -10.3 -3.75153 | opp_overlap 3894446 3894445 3894447 TTCTCCTAACTCAAA CCAGCCGGA AAA CCCGGCGGG CGTTTTCATCAGTTT YPDSF_3392 3895224 - 3894442 - | DNase TatD TERM 4237 3895259 - 3895244 - R 100 -11.8 -4.45168 | GTTCCAAAACAGAAA CCGCCC AGAA GGGCGG CTAAATATCAACGCA YPDSF_3393 3896056 - 3895280 - | TatABCE protein translocation system subunit TERM 4238 3895983 - 3895969 - G 81 -6.4 -4.98436 | opp_overlap 3895969 3895970, overlap 3895970 CCAATACCAGAAAAA CCACCA AAA TGGTGA TTATACAATTCAGTA YPDSF_3394 3896721 - 3896059 - | Sec-independent protein translocase protein TatB YPDSF_3395 3896991 - 3896725 - | Sec-independent protein translocase protein TatA ubiB 3898802 - 3897171 - | putative ubiquinone biosynthesis protein UbiB TERM 4239 3897433 - 3897446 + g 71 -5.2 -4.48449 | overlap 3897436 3897438 TCAGGGAATTTTTCA GCCC AGAAAG GGGC TTTCTCTTTTAATGC YPDSF_3397 3899452 - 3898802 - | hypothetical protein ubiE 3900221 - 3899466 - | ubiquinone/menaquinone biosynthesis methyltransferase TERM 4240 3900304 - 3900280 - R 72 -7.7 -3.75015 | AGAACTCCGATGAAA GCCCCACACCC CCT GGTTGCGGTGC CAATTAAATTACTCT YPDSF_3399 3901818 - 3900313 - | DNA recombination protein YPDSF_3400 3902556 - 3902026 - | hypothetical protein TERM 4241 3902216 - 3902203 - G 74 -2.3 -5.07107 | overlap 3902193 GAAACGGCCAAAAAA GGCCC CAAA GAACC CCCAACGCTCGAAGA TERM 4242 3902799 - 3902772 - R 100 -13.6 -5.5074 | opp_overlap 3902776 TAACTTAACAAAAAA TAAACGGCTAGA AGAT TCCAGCCGTTTA AACAAATTAGCACAA YPDSF_3401 3904639 - 3902828 - | carbon starvation protein TERM 4243 3903100 - 3903084 - G 77 -12.3 -3.10895 | GTCAACATATACACA CGCTTGG TCG CCAAGCG CAGGATAATCGTGGC TERM 4244 3903816 - 3903803 - G 76 -8.1 -4.15222 | ACCGCCGTGAATAAA CTGCG TAAC CGCAG GGAATTGAATTTCAG TERM 4245 3904587 - 3904568 - G 95 -6.4 -5.5112 | overlap 3904570 CTTACGAACAAAAAA GATACCGT ATAA ACGGTAGC AGATCGTAAGGATAC TERM 4246 3904585 - 3904570 - G 76 -7.6 -4.39002 | overlap 3904568 TACGAACAAAAAAGA TACCGT ATAA ACGGTA GCAGATCGTAAGGAT YPDSF_3402 3905833 - 3905003 - | hypothetical protein TERM 4247 3905920 - 3905901 - R 100 -11.4 -4.36862 | AGATGAAATAAAGAA CGGGCCAG TAAA CTGACCCG AGAACAAACCCTCTA YPDSF_3403 3906715 - 3905954 - | uridine phosphorylase TERM 4248 3907527 - 3907539 + G 76 -7.7 -4.29738 | opp_overlap 3907526 CTGGTAAAAAAAGTC CCTGA TCG TCAGG TTTTGGTGGATCTCG TERM 4249 3907761 - 3907776 + G 70 -10.4 -2.88544 | GCTATCGATCTCTGC GCCCCA GTGT TGGGGC TATATGGAGGTAAAG YPDSF_3404 3907143 - 3908015 + | carboxymethylenebutenolidase TERM 4250 3908035 - 3908020 - T 100 -11.8 -5.52096 | AAACGCAATAAAAAA GGGCGC GAAA GCGCCC CAAAAGCCCCACTAC YPDSF_3405 3910346 - 3908070 - | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase YPDSF_3407 3912225 - 3911293 - | membrane protein YPDSF_3406 3910452 - 3911405 + | LysR family transcriptional regulator TERM 4251 3912079 - 3912067 - GT 70 -3.3 -4.89729 | overlap 3912072 CAGAAAAGGCAAAAA GACCA GTG CGGCC AGCCCGACACGCATC YPDSF_3408 3913501 - 3912545 - | membrane protein TERM 4252 3913526 - 3913560 + r 85 -5.7 -5.18726 | CCTGTCAGGCCGGGC CAGGTCAGCCCGT AAATGTAAG AATGGCTGACCTG TTTTTATTATGGCGG ugpQ 3914351 - 3913602 - | cytoplasmic glycerophosphodiester phosphodiesterase ugpC 3915421 - 3914348 - | glycerol-3-phosphate transporter ATP-binding subunit TERM 4253 3914429 - 3914439 + g 71 -6.8 -4.25056 | opp_overlap 3914424, overlap 3914426 ATGCAATGTACTGCC TGCC ACT GGCA TTTCTTCATGGGATA TERM 4254 3914478 - 3914456 - G 70 -9.8 -3.32844 | TTCTTCATGGGATAA GCGAGCAATG ATA CTTTGCCCGC CCCACAGGCCGTGCG TERM 4255 3914765 - 3914791 + g 74 -7.9 -4.2461 | opp_overlap 3914758 TTTATAAACCTCGCT GGGGGTACCGA TTTGC TCGGCAACCCC TTTGTTCATCACAAT YPDSF_3411 3916273 - 3915428 - | glycerol-3-phosphate transporter membrane protein TERM 4256 3915496 - 3915481 - G 71 -6.8 -4.25256 | GCTGCATCAAAAGAA CCACCA CGAC CGGTGG AATTAAAGTCAAAAT TERM 4257 3916045 - 3916035 - G 76 -5.4 -4.81863 | AAAGCCATAACAAAA CTGT TCA ACAG CATCAACCCGAAAGG YPDSF_3412 3917157 - 3916270 - | glycerol-3-phosphate transporter permease YPDSF_3413 3918774 - 3917455 - | glycerol-3-phosphate transporter periplasmic binding protein TERM 4258 3918028 - 3918039 + g 100 -5.8 -5.5353 | opp_overlap 3918028 3918026 TTTACGGCCAAAATA GGTG AAAT CACC TTTTTTATTCATATC TERM 4259 3919156 - 3919143 - H 70 -5.3 -4.55689 | ATCATTCAGACAAAA TGGTA TAAT TACCA CTTGAAATAACGTTA YPDSF_3414 3919212 - 3919820 + | hypothetical protein TERM 4260 3919886 - 3919858 - f 71 -9 -3.4052 | gap 1, opp_overlap 3919858 3919860 3919862 TGTTAATTTAATGAA TACAGCCATGGAA TTAT CTCC-TGGCTGTA TATATCTGTCATACT TERM 4261 3921217 - 3921183 - g 87 -4.8 -5.49809 | overlap 3921185 CAAAGGGTAAAAAAA CGCCCCGTTTAGTCCA GTT TGGACGCAGCAGGGTG ATAGAAAGCGTACAA YPDSF_3415 3920087 - 3922420 + | hypothetical protein TERM 4262 3922591 - 3922577 - gf 72 -9.2 -3.22475 | opp_overlap 3922577, overlap 3922575 TGCAGGTGTATAACA GCGGCG ATA CACCGC TTTATCTGGATATCA TERM 4263 3922577 - 3922591 + GF 71 -7 -4.07868 | opp_overlap 3922575 3922577 TGCAGGTGTATAACA GCGGCG ATA CACCGC TTTATCTGGATATCA YPDSF_3416 3922438 - 3923124 + | hypothetical protein YPDSF_3417 3923096 - 3923743 + | hypothetical protein TERM 4264 3924266 - 3924252 - g 79 -9.2 -4.13728 | CAGATATCCGCAAAA GCCCCC GCT GGGGAC AATACTGCGGGGAAA YPDSF_3418 3923805 - 3924323 + | hypothetical protein YPDSF_3419 3924387 - 3925493 + | hypothetical protein YPDSF_3420 3926069 - 3925608 - | hypothetical protein livF 3927028 - 3926297 - | leucine/isoleucine/valine transporter ATP-binding subunit livG 3927810 - 3927043 - | leucine/isoleucine/valine transporter ATP-binding subunit livM 3929093 - 3927807 - | leucine/isoleucine/valine transporter permease subunit TERM 4265 3928137 - 3928158 + g 73 -8.7 -3.71672 | ACCTGCAAAGGCCGC GCTGATGGT AAAT GCCGTCAGC TTAATTTTGGTCGGG YPDSF_3424 3930016 - 3929090 - | branched-chain amino acid transporter permease subunit LivH TERM 4266 3930107 - 3930087 - R 100 -10.4 -4.70659 | CTGTAGAGGGAAAAA TCCCCCCG GAATA CGAGGGGA TGCAGTTGATAGAAG YPDSF_3425 3931312 - 3930197 - | branched-chain amino acid-binding protein TERM 4267 3930307 - 3930318 + g 74 -7.2 -4.17023 | overlap 3930298 3930297 CCATCACGGTCTCAA CCGG TTTG CCGG TTTTCAGATCGTTAG TERM 4268 3930945 - 3930964 + g 80 -12.2 -3.39717 | GCGTTTGTAGCAGCA GGGGTGAT CATT ATCACCCC TTCATCTTCATAAAT TERM 4269 3931832 - 3931854 + G 70 -4.8 -4.73388 | opp_overlap 3931815 TGCTGCCTGGCAACA GTGGATTACT GAG GGTAGACCAC TTTTTGCTGCACGTT YPDSF_3426 3931689 - 3932126 + | acetyltransferase TERM 4270 3932298 - 3932266 - T 100 -11.3 -5.41143 | opp_overlap 3932273, overlap 3932272 3932273 TATCTGCCAAAAAAA TAAATATCCTCCGGC ATA GCCGGAGGTTTTTCA TATGCGCCTATAAGG TERM 4271 3932292 - 3932272 - T 100 -12.5 -4.21073 | opp_overlap 3932273, overlap 3932266 3932273 CCAAAAAAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 4272 3932273 - 3932291 + T 100 -16 -4.8048 | opp_overlap 3932272 3932266 3932273 CAAAAAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 4273 3932291 - 3932273 - T 100 -16 -3.10203 | opp_overlap 3932273, overlap 3932272 3932266 CAAAAAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC YPDSF_3427 3932830 - 3932372 - | transposase for the IS1541 insertion element TERM 4274 3932943 - 3932961 + r 100 -16 -4.36914 | opp_overlap 3932943 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAGC TERM 4275 3932961 - 3932943 - R 100 -16 -3.07307 | opp_overlap 3932943 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAGC TERM 4276 3933001 - 3932981 - R 100 -11.2 -4.34402 | opp_overlap 3932981 CTGGGCACAGCAAAA GGGCGATA ATCAA TATCGCCC TTCTTTATCGTGCCG TERM 4277 3932981 - 3933001 + r 93 -11.2 -4.11183 | opp_overlap 3932981 CTGGGCACAGCAAAA GGGCGATA ATCAA TATCGCCC TTCTTTATCGTGCCG YPDSF_3428 3933901 - 3933044 - | RNA polymerase factor sigma-32 TERM 4278 3933463 - 3933477 + g 71 -7.8 -4.09739 | opp_overlap 3933459, overlap 3933459 CCTGATTAAACCAGC CCAGGC GCT GCTTGG TTTTACGCAGGTTGA ftsX 3935165 - 3934212 - | cell division protein FtsX YPDSF_3430 3935823 - 3935155 - | cell division protein FtsE YPDSF_3431 3937508 - 3935829 - | cell division protein TERM 4279 3936084 - 3936104 + g 80 -3.1 -5.26875 | opp_overlap 3936080, overlap 3936085 TGTCAGCATAACCTC ATGGGGGGC GTC GCCGTCCAG TTTTTTCATTACCCG TERM 4280 3937427 - 3937445 + g 85 -12.4 -3.70773 | overlap 3937423 CTTCTTTTTCAGTCG CCAGCGGC TCT GCTGCTGG TTCTTCACTCTGACG YPDSF_3432 3937790 - 3938452 + | 16S rRNA m(2)G966-methyltransferase TERM 4281 3938472 - 3938483 + G 78 -2.2 -5.32882 | overlap 3938468 3938466 GGCCGGTTACTGATG CTAG GCGT CTGG TTTTTTATACTGCTG YPDSF_3433 3938442 - 3938714 + | hypothetical protein YPDSF_3434 3939320 - 3938901 - | hypothetical protein TERM 4282 3939227 - 3939239 + g 80 -3.3 -5.252 | GTGCGCGATCATTTT CTGCA TCC TGCTG TTTTTTCTGCCAATA YPDSF_3435 3939852 - 3939532 - | hypothetical protein YPDSF_3436 3940142 - 3940768 + | hypothetical protein zntA 3941182 - 3943548 + | zinc/cadmium/mercury/lead-transporting ATPase YPDSF_3438 3944043 - 3943648 - | cell developmental protein SirA YPDSF_3439 3944186 - 3944854 + | hypothetical protein YPDSF_3440 3944984 - 3945511 + | hypothetical protein TERM 4283 3945522 - 3945546 + T 100 -13.6 -4.72631 | opp_overlap 3945512 3945526 AATAATCTGTCCCAG CAGAGCGCGG TTCAC TCGCGCTCTG TTTTATTGACTTACT glpC 3946968 - 3945673 - | sn-glycerol-3-phosphate dehydrogenase subunit C YPDSF_3442 3948239 - 3946965 - | anaerobic glycerol-3-phosphate dehydrogenase subunit B glpA 3949884 - 3948229 - | sn-glycerol-3-phosphate dehydrogenase subunit A glpQ 3950509 - 3951624 + | glycerophosphodiester phosphodiesterase TERM 4284 3951712 - 3951731 + T 81 -4.4 -5.41143 | gap 1 ATTATTCAACGTGAC TCACTA-CA TTC TGATAGTGA TTTTTTTCACCCATG YPDSF_3445 3952897 - 3951698 - | hypothetical protein TERM 4285 3952714 - 3952725 + g 73 -3 -5.04908 | TAAATTTCTTCTCAG CAAT ATTT ATTG TTATTTTTTTATTTT TERM 4286 3953136 - 3953118 - R 95 -12.4 -3.28041 | AACGCCAAGGAGGAA GGGTGACC AAA GGCCACCC TACTCCACAGCATCA YPDSF_3446 3954151 - 3953174 - | putative sugar phosphatase YPDSF_3447 3955013 - 3954018 - | lysophospholipase L2 TERM 4287 3954067 - 3954054 - G 71 -5.2 -4.56775 | overlap 3954062 ATGTTGCGCGAAAAA GCGC AATATG GCGC TAAGCGCCTCGGCAC rhtB 3955227 - 3955847 + | homoserine/homoserine lactone efflux protein TERM 4288 3955902 - 3955851 - T 84 -10.9 -3.66216 | gap 1, opp_overlap 3955870, overlap 3955849 3955852 CGCAAAGTATAAAGA GCCTGTCAGGCTAGCCAACCGGGT TAAAT ACCCCGTTGGCTAACCCGTTAG-C GGGACAATATCAGTT TERM 4289 3955902 - 3955852 - T 77 -11.1 -2.79007 | opp_overlap 3955870, overlap 3955849 3955851 GCAAAGTATAAAGAG CCTGTCAGGCTAGCCAACCGGGT TAAAT ACCCCGTTGGCTAACCCGTTAGC GGGACAATATCAGTT YPDSF_3449 3956518 - 3955898 - | threonine efflux system YPDSF_3450 3958457 - 3956625 - | ATP-dependent DNA helicase RecQ TERM 4290 3958511 - 3958479 - R 95 -14.2 -2.86164 | gap 1, opp_overlap 3958485 3958487 CCCCCAACTATTAGA TCTG-CACAGGCCGG CTAA CCGGCCTGTGTCTGA AACTGTGATAACGCC TERM 4291 3958485 - 3958504 + r 100 -15 -2.89191 | opp_overlap 3958479, overlap 3958487 ACTATTAGATCTGCA CAGGCCGG CTAA CCGGCCTG TGTCTGAAACTGTGA TERM 4292 3958487 - 3958502 + r 86 -11.8 -2.99649 | opp_overlap 3958479, overlap 3958485 TATTAGATCTGCACA GGCCGG CTAA CCGGCC TGTGTCTGAAACTGT YPDSF_3451 3959413 - 3958535 - | phospholipase A YPDSF_3452 3959635 - 3960105 + | hypothetical protein TERM 4293 3960418 - 3960432 + G 83 -9.2 -4.41494 | overlap 3960419 AGCGCCTATTGTTAC TGGCGG TGA CCGCCG TTTTGATTGCCAGTA TERM 4294 3960419 - 3960431 + G 73 -10.5 -3.24414 | overlap 3960418 GCGCCTATTGTTACT GGCGG TGA CCGCC GTTTTGATTGCCAGT YPDSF_3453 3960192 - 3961082 + | hypothetical protein TERM 4295 3961097 - 3961141 + T 100 -11.7 -5.5604 | gap 2, opp_overlap 3961097 AGATGCCGAAAAAAA GCCCGGTTACTCAATATTGGG GTTAG TCCAAT-T-GAGTGACCGGGC TTTTTTATTCGTTGC TERM 4296 3961141 - 3961097 - T 100 -8.8 -5.42862 | gap 2, opp_overlap 3961097 AGATGCCGAAAAAAA GCCCGGTTACTCAATATTGG GGTTAGT CCAAT-T-GAGTGACCGGGC TTTTTTATTCGTTGC YPDSF_3454 3962130 - 3961180 - | magnesium/nickel/cobalt transporter CorA TERM 4297 3961954 - 3961940 - G 85 -3.5 -5.42259 | gap 1, overlap 3961942 TCATCTTCAAAAAAA CG-GGC CGAA GCCTCG ATATCGTCCAACTCT TERM 4298 3962695 - 3962674 - R 100 -7.3 -5.85178 | opp_overlap 3962674 AAGACCCAAAAAAAA CCGAAGTCA GTAA CAACTTCGG TTTTGCGTACCCTGC YPDSF_3455 3963621 - 3962779 - | hypothetical protein YPDSF_3456 3964852 - 3963635 - | hypothetical protein TERM 4299 3964613 - 3964602 - G 73 -5.8 -4.46212 | CGGCTCACCATAAAA CGCT CGAA AGCG ATAGCCATAGCATTA YPDSF_3457 3965280 - 3965966 + | TetR family transcriptional regulator TERM 4300 3966067 - 3966041 - T 76 -9.4 -3.40971 | overlap 3966039 AAATAAAAATAGATA GGTGGCCGCACT GAC ACTGCAACCACC ACAAATATCAGATTA uvrD 3968242 - 3966080 - | DNA-dependent helicase II TERM 4301 3967776 - 3967786 + g 70 -8.2 -3.66995 | CTCTCAATATGTTGC GGGC GCA GCCC TTCGTCTTTTTTGCC TERM 4302 3968191 - 3968171 - G 85 -12.5 -3.75024 | opp_overlap 3968173 3968175 3968178 GGCCAGTACCAACAA GTTGCCGCG CGG CGCGGCCAC GGCGTCACGTTGTTT TERM 4303 3968175 - 3968203 + g 74 -4.3 -4.86621 | opp_overlap 3968171, overlap 3968173 3968178 AGTACCAACAAGTTG CCGCGCGGCGCGG CCA CGGCGTCACGTTG TTTTTCATTCAGGCT TERM 4304 3968178 - 3968200 + g 76 -6.8 -4.53777 | opp_overlap 3968171, overlap 3968173 3968175 ACCAACAAGTTGCCG CGCGGCGCGG CCA CGGCGTCACG TTGTTTTTCATTCAG YPDSF_3459 3969060 - 3968344 - | flavin mononucleotide phosphatase TERM 4305 3968976 - 3968951 - G 74 -4 -5.0133 | gap 1, overlap 3968952 3968953 3968955 TACTGTTGTAAAAAA GCCACAGACTG CTGTT CAGTCCGCG-C GATCACTGGCCGATT xerC 3969971 - 3969060 - | site-specific tyrosine recombinase XerC YPDSF_3461 3970672 - 3969968 - | hypothetical protein dapF 3971561 - 3970737 - | diaminopimelate epimerase TERM 4306 3971136 - 3971108 - G 73 -11.7 -2.64616 | overlap 3971117 TGCCCATCGACACCA CGCCACACAGCAC CGT ATGCTCTGCGGCG CGTAAAATATAGGTT YPDSF_3463 3971933 - 3971745 - | lipoprotein cyaY 3972085 - 3972405 + | frataxin-like protein TERM 4307 3972445 - 3972425 - T 73 -2.5 -5.14965 | overlap 3972426 AGTTGGATCAAAAAA GGACACG ATTTTTA CGTGTCA GACTGCTGACAAACC TERM 4308 3972531 - 3972505 - T 84 -10.1 -3.82218 | gap 1, opp_overlap 3972514, overlap 3972506 3972521 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 4309 3972532 - 3972506 - T 72 -10.1 -2.88849 | gap 1, opp_overlap 3972514, overlap 3972505 3972521 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT cyaA 3975201 - 3972649 - | adenylate cyclase YPDSF_3466 3975265 - 3975474 + | hypothetical protein TERM 4310 3975567 - 3975593 + F 78 -2.3 -5.4477 | overlap 3975565 3975572 GTCATGCATCCATTA CAATCGTTGTA TTCAT TGCAACAGTTG TTTTTTTAGGCATTT hemC 3975695 - 3976636 + | porphobilinogen deaminase TERM 4311 3977149 - 3977167 + G 77 -11 -3.43203 | AGCGAACAAAGTGCT CACTGGCA ACG TGCCGGTG TTGATATTCTGGTGG hemD 3976633 - 3977382 + | uroporphyrinogen-III synthase TERM 4312 3978165 - 3978155 - g 74 -6.8 -4.28762 | opp_overlap 3978155 AGAATCTGAGCAAAA GCTG GCA CAGC TTTATGTCTGATTTC TERM 4313 3978155 - 3978165 + G 71 -6.8 -4.19024 | opp_overlap 3978155 AGAATCTGAGCAAAA GCTG GCA CAGC TTTATGTCTGATTTC YPDSF_3469 3977413 - 3978537 + | putative uroporphyrinogen III C-methyltransferase YPDSF_3470 3978540 - 3979760 + | putative protoheme IX biogenesis protein TERM 4314 3979879 - 3979847 - T 100 -11.3 -4.19704 | opp_overlap 3979854, overlap 3979851 3979853 3979854 GAAGCGCACCCAAAA TAAATATCCTCCGGC ATA GCCGGAGGTTTTTCA TATGCGCCTATAAGG TERM 4315 3979875 - 3979851 - T 100 -9.9 -4.68908 | opp_overlap 3979854, overlap 3979847 3979853 3979854 CGCACCCAAAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCATATGCGCCTAT TERM 4316 3979873 - 3979853 - T 100 -12.5 -3.95475 | opp_overlap 3979854, overlap 3979851 3979847 3979854 CACCCAAAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 4317 3979854 - 3979872 + T 100 -16 -4.8048 | opp_overlap 3979853 3979851 3979847 3979854 ACCCAAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 4318 3979872 - 3979854 - T 100 -16 -2.962 | opp_overlap 3979854, overlap 3979853 3979851 3979847 ACCCAAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC YPDSF_3471 3980411 - 3979953 - | transposase for the IS1541 insertion element TERM 4319 3980524 - 3980542 + r 100 -16 -4.36914 | opp_overlap 3980524 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 4320 3980542 - 3980524 - R 100 -16 -3.07307 | opp_overlap 3980524 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 4321 3980583 - 3980562 - R 100 -10.2 -5.60993 | opp_overlap 3980564 CTGGGCACAAAAAAA CACTTGCC GAAAAG GGCAAGTG TCTAAAATTTTCAGG TERM 4322 3981264 - 3981250 - R 100 -12.8 -5.78622 | opp_overlap 3981250 TCAGGCGAAAAAAAA CCCCGC ATT GCGGGG TTTCTTCTGAAATTG TERM 4323 3981250 - 3981264 + r 100 -12.8 -4.33248 | opp_overlap 3981250 TCAGGCGAAAAAAAA CCCCGC ATT GCGGGG TTTCTTCTGAAATTG TERM 4324 3981396 - 3981423 + r 73 -7.2 -4.08706 | CTCTCGACCTATGTC CATGTAAATATT AATA AATATCTACATG TTTGTGTGGTGCGAA YPDSF_3472 3983308 - 3981917 - | putative transport protein YifK TERM 4325 3982737 - 3982725 - G 89 -10.5 -4.41348 | CCCCCGGCAAAGAAA CCGCC ATG GGCGG TCAGGTTATCGAAGC YPDSF_3473 3984572 - 3983832 - | putative UDP-N-acetyl-D-mannosaminuronic acid transferase TERM 4326 3983879 - 3983865 - G 76 -7.2 -4.4078 | overlap 3983870 ATAATAACCAACAAA CTTAAG CAG CTTAAG CTGACGACGAATGCG YPDSF_3474 3985945 - 3984581 - | putative entero common antigen polymerase YPDSF_3475 3987027 - 3985942 - | 4-alpha-L-fucosyltransferase TERM 4327 3986811 - 3986786 - G 82 -7.5 -4.64861 | gap 1, overlap 3986782 CCGTGCCAAAAGAAA CGCGCAC-TGCG ATC CGCCTGTGCACG GGCAATAACCGCCTC YPDSF_3476 3988306 - 3987050 - | lipopolysaccharide biosynthesis protein TERM 4328 3988272 - 3988243 - G 83 -13.7 -3.20227 | overlap 3988241 GTTTAACCACCAATA GCCCTACGCCAAT CTTG ATTAGCGTAGAGC AGGCAGTCCAAATCG YPDSF_3477 3989438 - 3988308 - | TDP-4-oxo-6-deoxy-D-glucose transaminase YPDSF_3478 3990204 - 3989440 - | TDP-fucosamine acetyltransferase TERM 4329 3989704 - 3989683 - GR 72 -7.2 -3.9279 | overlap 3989674 ACGCAACGTCACAAA CCCGACGG GTTGAT CCGTAGGG TCGAGCACCAATAAA YPDSF_3479 3991036 - 3990155 - | glucose-1-phosphate thymidylyltransferase TERM 4330 3990655 - 3990673 + gr 89 -10.2 -3.93061 | opp_overlap 3990645 3990646 3990643 AAACAGTCGCGCCCT GCTGACGC GCG GCGACAGC TTTCAGTTTTGGACT TERM 4331 3991159 - 3991200 + r 77 -10.9 -2.74144 | opp_overlap 3991159, overlap 3991158 3991162 CCGATGATTAATCGA CTTTGGTGTCTCTCGTAGG TCGC CCAACGATAGACACTATAG ATTTCAAGGTGCAGG TERM 4332 3991162 - 3991197 + r 76 -11.2 -2.64803 | opp_overlap 3991159, overlap 3991159 3991158 ATGATTAATCGACTT TGGTGTCTCTCGTAGG TCGC CCAACGATAGACACTA TAGATTTCAAGGTGC YPDSF_3480 3992387 - 3991314 - | dTDP-D-glucose-4,6-dehydratase wecC 3993640 - 3992378 - | UDP-N-acetyl-D-mannosamine dehydrogenase TERM 4333 3993593 - 3993579 - G 74 -7 -4.42238 | overlap 3993580 TTACGCGAAGCAAAA GCCGCC GCG GTCGGC AGACCAATATACCCA YPDSF_3482 3994821 - 3993637 - | UDP-N-acetylglucosamine 2-epimerase YPDSF_3483 3996175 - 3995099 - | lipopolysaccharide biosynthesis protein WzzE YPDSF_3484 3997278 - 3996196 - | undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase TERM 4334 3997658 - 3997676 + r 100 -11.7 -4.23892 | opp_overlap 3997658 TCCAAAAGTAAAAAA CGCCACG ACTGG CGTGGCG TTTTGACTGATTCAA TERM 4335 3997676 - 3997658 - R 100 -11.7 -5.46698 | opp_overlap 3997658 TCCAAAAGTAAAAAA CGCCACG ACTGG CGTGGCG TTTTGACTGATTCAA rho 3999087 - 3997828 - | transcription termination factor Rho TERM 4336 3998499 - 3998481 - G 74 -6.8 -4.35461 | overlap 3998483 GCAATACCATCAAAA CACAATCA GGG TGATTGTA AGCAATGCTGGTCGC TERM 4337 3998784 - 3998762 - G 74 -6.9 -4.28369 | AACAATGCAAAATAA CGCTCGCCT TCTTT AGGCGGACG AATCTTACCGGCAAC YPDSF_3486 3999893 - 3999567 - | thioredoxin 1 TERM 4338 4000701 - 4000691 - g 78 -2.4 -5.25803 | AACCGTTACAAAAAA CCGG TCA CCGC ATCAAAGAAGAGCTG TERM 4339 4000760 - 4000742 - g 86 -3 -5.59655 | opp_overlap 4000744, overlap 4000743 4000744 CAAATGAAGAAAAAA TGCGTCTG TTA CAGACGTT AATTGAAGAAGAATG TERM 4340 4000744 - 4000758 + G 70 -10 -3.33696 | opp_overlap 4000743 4000742 4000744 AATGAAGAAAAAATG CGTCTG TTA CAGACG TTAATTGAAGAAGAA YPDSF_3487 4000012 - 4001298 + | ATP-dependent RNA helicase RhlB YPDSF_3488 4001302 - 4002798 + | guanosine pentaphosphate phosphohydrolase TERM 4341 4002886 - 4002909 + T 84 -11.1 -3.69702 | overlap 4002889 GCCTTAATGCATGGC TAACGGGCA ATAGAC TGCCCGTTA TTATCTTCACTACTG TERM 4342 4002889 - 4002906 + T 77 -8.4 -3.97511 | overlap 4002886 TTAATGCATGGCTAA CGGGCA ATAGAC TGCCCG TTATTATCTTCACTA YPDSF_3489 4004987 - 4002966 - | ATP-dependent DNA helicase Rep TERM 4343 4003005 - 4003022 + g 100 -11.3 -4.66609 | opp_overlap 4003004 4003003 CTGAGCACGAAGATT GGCCAGA TGAC TCTGGCC TTTTTGCATACGCTC TERM 4344 4003121 - 4003105 - G 79 -7.9 -4.47328 | AACTCCATCAGAAAA CGGCTAG GTT CTGGCCG AATCAACTCGCCGTA TERM 4345 4004099 - 4004084 - G 78 -2.6 -5.26316 | opp_overlap 4004077 TCAGTTCAGAAAAAA GTTTCT TTTC AAAAAC ATGTGGGTTGTTGGC YPDSF_3490 4005191 - 4005472 + | peptidyl-prolyl cis-trans isomerase C TERM 4346 4005514 - 4005473 - f 71 -9.6 -3.06796 | gap 1, opp_overlap 4005474 4005476 4005481, overlap 4005481 TTGTACCGCAGCTAA TCCTGAAATACGCCACGCT ATAAA AG-GTGGCGTATTTCATGT TTATACTCGTCATAC TERM 4347 4005474 - 4005513 + F 100 -13.1 -4.00038 | gap 1, opp_overlap 4005473 4005481, overlap 4005476 4005481 TGTACCGCAGCTAAT CCTGAAATACGCCACGCT ATAAA AG-GTGGCGTATTTCATG TTTATACTCGTCATA TERM 4348 4005476 - 4005511 + F 100 -14.3 -3.58864 | gap 1, opp_overlap 4005473 4005481, overlap 4005474 4005481 TACCGCAGCTAATCC TGAAATACGCCACGCT ATAAA AG-GTGGCGTATTTCA TGTTTATACTCGTCA TERM 4349 4005481 - 4005506 + F 77 -8.4 -4.05181 | gap 1, opp_overlap 4005473 4005481, overlap 4005476 4005474 CAGCTAATCCTGAAA TACGCCACGCT ATAAA AG-GTGGCGTA TTTCATGTTTATACT TERM 4350 4005506 - 4005481 - f 73 -8.4 -3.61268 | gap 1, opp_overlap 4005481 4005476 4005474, overlap 4005473 CAGCTAATCCTGAAA TACGCCACGCT ATAAA AG-GTGGCGTA TTTCATGTTTATACT YPDSF_3491 4005711 - 4006502 + | hypothetical protein TERM 4351 4007172 - 4007137 - f 100 -6.4 -6.06529 | gap 1, opp_overlap 4007147, overlap 4007139 TACACAGAAAAAAAA CATCAAAACACCTTTGA AAT TAAAAGGTATTTTGA-G ACGAATAATAAAAAC TERM 4352 4007171 - 4007139 - f 100 -10.1 -4.65669 | opp_overlap 4007147, overlap 4007137 CACAGAAAAAAAACA TCAAAACACCTTTGA AAT TAAAAGGTATTTTGA GACGAATAATAAAAA TERM 4353 4007213 - 4007267 + F 82 -10.2 -3.71794 | opp_overlap 4007222, overlap 4007222 GGAATATATATTCAC TCAATCAAATTCCCCATTCGGATTTT ATT AAAATCCGAATGGGGAATTAACTCCA TTTCAATGATTACAT TERM 4354 4007222 - 4007258 + F 100 -24.1 -3.11732 | opp_overlap 4007222, overlap 4007213 ATTCACTCAATCAAA TTCCCCATTCGGATTTT ATT AAAATCCGAATGGGGAA TTAACTCCATTTCAA TERM 4355 4007258 - 4007222 - f 100 -24.1 -3.93556 | opp_overlap 4007222 4007213 ATTCACTCAATCAAA TTCCCCATTCGGATTTT ATT AAAATCCGAATGGGGAA TTAACTCCATTTCAA YPDSF_3492 4007294 - 4007824 + | fimbrial protein YPDSF_3493 4007888 - 4008619 + | fimbrial chaperone YPDSF_3494 4008647 - 4011274 + | outer membrane usher protein TERM 4356 4012039 - 4012020 - gf 83 -10.7 -3.54129 | TATATCGCGTTTAAA GGGCCAG GAATTA CTGGCCC GATTGAGGGTACTGA TERM 4357 4012612 - 4012594 - gf 71 -5.9 -4.33004 | AGTTAAGCAAAATAA GCGGGCA AACAG TGACCGC CGGAGCAGTGAATGC YPDSF_3495 4011279 - 4012658 + | hypothetical protein TERM 4358 4012975 - 4013004 + GT 80 -11.5 -2.6062 | gap 1, opp_overlap 4012978, overlap 4012974 4012971 4012978 CCGGTATTCCGGTTA CAACCTCAGGC-AC AGC GTAGCCTGCGGTTG ATCTTATCTGGTGGG YPDSF_3496 4012624 - 4013442 + | chaperone protein TERM 4359 4013661 - 4013640 - T 72 -9.5 -3.14564 | GCACCTGGGGATTAA TGAGCCTCA CCCC TGAGACTCA CCCTGCGGGCAGCAT TERM 4360 4014057 - 4014044 - T 78 -5.9 -4.81163 | opp_overlap 4014039 4014044, overlap 4014039 TAAATATTAACAAAA CCACC AGAA GGCGG TTTGGATTATATATT TERM 4361 4014818 - 4014790 - T 82 -3.2 -5.47964 | gap 1 ATAAAATAAGAAAAA CGCCCAA-CAATA CACT CATTGACTGGACG TTAACTGAAGCATAT TERM 4362 4014925 - 4014935 + T 76 -6.8 -4.43909 | CCCTTTTCATCCTCA GCCA ACT TGGC TTCTTTTATTAGCCT YPDSF_3500 4016941 - 4016741 - | hypothetical protein TERM 4363 4017006 - 4017018 + r 75 -9.1 -3.58533 | TACCTAATATTCTTA CCCCA CCC TGGGG TTTCGGCAATTCTAC TERM 4364 4017090 - 4017068 - R 100 -9.8 -5.36441 | GGTGCACATAAAAAA GCCCCCCTTT TTT ACAGGGAGGC TCAATATAAAATCAC YPDSF_3501 4018600 - 4017122 - | ketol-acid reductoisomerase TERM 4365 4018834 - 4018809 - H 72 -9.9 -2.87529 | gap 1, opp_overlap 4018807, overlap 4018808 TGATATATTAACAAT GTGATATTGCAG TTT CTGCAATA-CAC CCGATTTCTTATGCA TERM 4366 4018994 - 4019026 + G 79 -7.6 -4.58395 | CTTTCCCGCCAGATC CAGCGGCTGGAAGA GACTA TCGGCCAGCCCCTG TTTTTACGCGATAAC TERM 4367 4019737 - 4019723 - g 100 -11.4 -5.08824 | opp_overlap 4019710 4019723 TGTGTACCGAAAAAA CGGCTC CAA GAGCCG TTGATTGATGCATTT TERM 4368 4019723 - 4019737 + G 77 -11.4 -3.41982 | opp_overlap 4019723, overlap 4019710 TGTGTACCGAAAAAA CGGCTC CAA GAGCCG TTGATTGATGCATTT YPDSF_3502 4018886 - 4019767 + | DNA-binding transcriptional regulator IlvY YPDSF_3503 4020031 - 4019822 - | hypothetical protein TERM 4369 4020355 - 4020389 + H 70 -7.9 -3.64831 | opp_overlap 4020376, overlap 4020353 4020356 ATTTAGGCGGTGTTA ACCGGATAAGCGTGT CAATA ATAAGCTTATCCGGC TTATGTCATTATTAG TERM 4370 4020356 - 4020388 + H 81 -11.4 -2.78176 | opp_overlap 4020376, overlap 4020355 4020353 TTTAGGCGGTGTTAA CCGGATAAGCGTGT CAATA ATAAGCTTATCCGG CTTATGTCATTATTA YPDSF_3504 4020643 - 4020834 + | hypothetical protein TERM 4371 4020866 - 4020853 - f 73 -5.3 -4.74453 | CAACACAGTTAAAAA CAGAT TTTA ATCTG CATAATATTTCAAGC YPDSF_3505 4020927 - 4021598 + | hypothetical protein YPDSF_3506 4021582 - 4022043 + | membrane protein YPDSF_3507 4022123 - 4022584 + | membrane protein TERM 4372 4022834 - 4022810 - g 79 -9.4 -4.25056 | overlap 4022811 TATTTTAGTAAGAAA CTTCCCTTTC ACTGA GAAAGGGAAA ATAAACTGGTGGCTA TERM 4373 4022833 - 4022811 - g 71 -10.7 -3.14552 | overlap 4022810 ATTTTAGTAAGAAAC TTCCCTTTC ACTGA GAAAGGGAA AATAAACTGGTGGCT YPDSF_3508 4022664 - 4023128 + | membrane protein YPDSF_3509 4024803 - 4023259 - | threonine dehydratase YPDSF_3510 4026659 - 4024809 - | dihydroxy-acid dehydratase YPDSF_3511 4027896 - 4026970 - | branched-chain amino acid aminotransferase TERM 4374 4027483 - 4027497 + g 70 -10 -3.28924 | opp_overlap 4027483 4027482 CACCATAGCATCAAT GCCTTG CTC CAAGGC TTCTGCACCCAGATA ilvM 4028176 - 4027919 - | acetolactate synthase 2 regulatory subunit YPDSF_3513 4029819 - 4028173 - | acetolactate synthase 2 catalytic subunit TERM 4375 4028794 - 4028820 + g 74 -11.6 -3.14132 | opp_overlap 4028790 GTGGTCATAACGCCA GTGATGTTGCTG TTT CAGCGCCATCAC TTCATCACGCCACGA TERM 4376 4029911 - 4029934 + H 100 -13.8 -3.69069 | opp_overlap 4029911 CGTGCCAATAAAAAA CCCCCGGACC TTTC GGTGCGGGGG TTCTCTTGAGATTAA TERM 4377 4029934 - 4029911 - H 100 -13.8 -5.4505 | opp_overlap 4029911 CGTGCCAATAAAAAA CCCCCGGACC TTTC GGTGCGGGGG TTCTCTTGAGATTAA YPDSF_3514 4030442 - 4031965 + | magnesium chelatase family protein TERM 4378 4031985 - 4031970 - T 100 -11.8 -4.20516 | GCCTGATGTAACAAA GGGGGC CAAA GCCCCC TAATACTCAACTAAC YPDSF_3515 4032644 - 4032222 - | hypothetical protein TERM 4379 4032390 - 4032376 - G 72 -10 -3.38046 | opp_overlap 4032374 4032376, overlap 4032374 TCGCCACGGCAAACA GCAACG AAC CGTTGC TCTTCTTCCGTTACT TERM 4380 4032376 - 4032390 + g 72 -10 -3.45087 | opp_overlap 4032376 4032374, overlap 4032374 TCGCCACGGCAAACA GCAACG AAC CGTTGC TCTTCTTCCGTTACT YPDSF_3516 4032679 - 4033560 + | transcriptional regulator HdfR YPDSF_3517 4034539 - 4033547 - | inner membrane ABC transporter permease protein YjfF YPDSF_3518 4035558 - 4034539 - | sugar transport system permease YPDSF_3519 4037060 - 4035570 - | sugar transport system ATP-binding protein TERM 4381 4037141 - 4037117 - R 87 -8.4 -4.4195 | overlap 4037120 ATACAGGTGATAAAA GCAGGCGGGG GCAAG CCCCGCCATC TGAATCAATAACCAA TERM 4382 4037138 - 4037120 - R 95 -13.1 -3.18044 | overlap 4037117 CAGGTGATAAAAGCA GGCGGGG GCAAG CCCCGCC ATCTGAATCAATAAC YPDSF_3520 4038102 - 4037146 - | periplasmic protein precursor TERM 4383 4038974 - 4038958 - R 73 -3.8 -5.02201 | AAAATATTATAAAAA TCATTA AATTA TAATGA GGAAAGAGAAAGCGA TERM 4384 4039058 - 4039077 + r 100 -9.2 -5.36441 | opp_overlap 4039058 ACTTAAAATAAAAAA CCCCTCGC TTTC GCGAAGGG TTTTTTATCTGGCAG TERM 4385 4039077 - 4039058 - R 100 -11.4 -5.80951 | opp_overlap 4039058 ACTTAAAATAAAAAA CCCCTCGC TTTC GCGAAGGG TTTTTTATCTGGCAG TERM 4386 4039593 - 4039583 - R 74 -6.8 -4.27316 | opp_overlap 4039583 TCTCTCAATTCAAAA CACC TTC GGTG TTGTAAGGTTAAGCC TERM 4387 4040705 - 4040716 + r 74 -4.4 -5.06816 | CCACTTTCGTGTTTG CACA GTGC TGTG TTTTTATTAAACAGT TERM 4388 4040752 - 4040778 + r 70 -9.4 -2.75844 | opp_overlap 4040728 4040730, overlap 4040751 4040754 CCAGCTGGTATCTGC GACTGGCTTCAG CTC CAGGAGCTAGTC CTTTCACCTAACGCC TERM 4389 4041212 - 4041230 + r 82 -10.3 -3.57798 | overlap 4041205 CTTGGTCTTCCGGCG TGCGGGT TTTTC ACCCGCA TTATCGTTACTTATG TERM 4390 4042668 - 4042705 + r 78 -5.7 -4.7629 | opp_overlap 4042662 4042668 4042671, overlap 4042671 ATTGTTAAAGAGCAA TATCGTAAACACGACTT GGTA AAGTCATCTTTACGTTA TTTTTCAGTTCATAA TERM 4391 4042671 - 4042702 + r 78 -7.4 -4.47888 | opp_overlap 4042671 4042668 4042662, overlap 4042668 GTTAAAGAGCAATAT CGTAAACACGACTT GGTA AAGTCATCTTTACG TTATTTTTCAGTTCA YPDSF_3521 4045831 - 4044968 - | glutamate racemase TERM 4392 4045215 - 4045203 - GR 72 -7.7 -3.76775 | opp_overlap 4045202 4045199 GTTAATAGAGGGAAA TGGGT GCA ACCCA ATACTATAGTATCCG TERM 4393 4045679 - 4045705 + gr 100 -13.8 -3.14132 | opp_overlap 4045676 4045672 AGCATATATATAGTG GAGATCCGGCAA CAG TTGCCGAATCTC TTGATAGACAGACAG btuB 4047671 - 4045776 - | vitamin B12/cobalamin outer membrane transporter YPDSF_3523 4048133 - 4049236 + | tRNA (uracil-5-)-methyltransferase TERM 4394 4049238 - 4049228 - T 76 -6.8 -4.57569 | GTACTGCTGGAAAAA CGTC ACT GACG AATAATTCATACCGC TERM 4395 4049266 - 4049284 + T 81 -11 -3.33696 | opp_overlap 4049266 4049275 CGCAGATAAAAGAAA GGGCAACG ACA TGTTGCCC TTAGTTGGCAAGACG TERM 4396 4049284 - 4049266 - T 100 -10.3 -4.83243 | opp_overlap 4049266, overlap 4049275 CGCAGATAAAAGAAA GGGCAAC GACAT GTTGCCC TTAGTTGGCAAGACG YPDSF_3524 4049777 - 4049370 - | hypothetical protein YPDSF_3525 4050425 - 4049790 - | DNA-binding transcriptional repressor FabR YPDSF_3526 4050643 - 4052043 + | soluble pyridine nucleotide transhydrogenase YPDSF_3527 4052943 - 4052026 - | DNA-binding transcriptional regulator OxyR TERM 4397 4053525 - 4053508 - g 84 -4.2 -5.24129 | overlap 4053524 GCGTGGTAGAAAAAA TGTTTG TCGAGC CAAACA AACCGGGCGACCCGT TERM 4398 4053529 - 4053539 + G 70 -8.2 -3.65693 | opp_overlap 4053528 4053524 4053529 TCGAGCCAAACAAAC CGGG CGA CCCG TTTGAAGTATCTGAT YPDSF_3528 4053090 - 4053821 + | peroxiredoxin/glutaredoxin family protein TERM 4399 4053875 - 4053892 + F 100 -11.3 -6.10295 | opp_overlap 4053873 AATAGGAAGTAACTT GGTAGGC TCCG GCCTACC TTTTTTTTCTGTTAG TERM 4400 4054441 - 4054459 + G 79 -7.4 -4.56597 | TTTAATTGGGACGAT CTGCCAGA ATC TGTGGCAG TTTTTGGCCCAGGCG YPDSF_3529 4053916 - 4055379 + | dihydrolipoamide dehydrogenase TERM 4401 4055414 - 4055398 - T 89 -11.5 -3.53811 | opp_overlap 4055398 CTCAGGCGGTTCAAA CCGGGCA CGG CGCCCGG TTTTTAATCCCCCGT TERM 4402 4055398 - 4055414 + T 100 -10.8 -4.7254 | opp_overlap 4055398 CTCAGGCGGTTCAAA CCGGGC ACGGC GCCCGG TTTTTAATCCCCCGT YPDSF_3530 4056298 - 4055495 - | membrane protein YPDSF_3531 4057691 - 4056363 - | HlyD family secretion protein YPDSF_3532 4059584 - 4057767 - | ABC transporter protein TERM 4403 4059710 - 4059734 + r 100 -13.7 -5.06414 | opp_overlap 4059705 4059708 GTGGTATCAATGACT CAGCCAGAAAG TTA TTTTCTGGCTG TTTTTCTTAAGCGGC YPDSF_3533 4060358 - 4059741 - | hemophore HasA TERM 4404 4060485 - 4060518 + r 100 -18.3 -4.26351 | overlap 4060486 TAGCTGTGTTCTCTC ACCCGCATCATTGAC TGCC GTCAATGATGCGGGA TTTATTCACTTGCTG TERM 4405 4060486 - 4060517 + r 100 -21.8 -3.15087 | overlap 4060485 AGCTGTGTTCTCTCA CCCGCATCATTGAC TGCC GTCAATGATGCGGG ATTTATTCACTTGCT YPDSF_3534 4063072 - 4060580 - | TonB dependent receptor protein TERM 4406 4061278 - 4061268 - G 71 -6.8 -4.25256 | CGGGTATCAAAATAA GCGA CCT TCGC GGCAAAGTGATCGTC TERM 4407 4063021 - 4063041 + g 70 -2 -4.92669 | opp_overlap 4063012, overlap 4063012 ATAATATACAAGTTG TAATTTTA TTCAC TGAAATTA TTGTTTTTTTATCTC TERM 4408 4063613 - 4063646 + r 76 -10.1 -3.33261 | opp_overlap 4063617 TAGTAACTGTTAATG CAAAGCGGGCCGCTG CAAT TAGCGGCCCGCCCCG TTCTCAAGATTAAAA TERM 4409 4063642 - 4063617 - R 100 -17.6 -3.75897 | opp_overlap 4063613 AACTGTTAATGCAAA GCGGGCCGCT GCAATT AGCGGCCCGC CCCGTTCTCAAGATT YPDSF_3535 4065044 - 4063671 - | argininosuccinate lyase TERM 4410 4063717 - 4063733 + g 70 -9.3 -3.5594 | opp_overlap 4063679 4063712 4063728, overlap 4063718 GCCGATGCAACCTGC TGCGGCG AAA CGCCGCC TTTGGCCACTCGCTT TERM 4411 4063718 - 4063732 + g 77 -12.8 -2.73243 | opp_overlap 4063679 4063712 4063728, overlap 4063717 CCGATGCAACCTGCT GCGGCG AAA CGCCGC CTTTGGCCACTCGCT TERM 4412 4064176 - 4064190 + g 90 -5.7 -5.24796 | overlap 4064169 4064167 TTACCACGGATGAGC TCCAG CGCAT CTGGA TTTTTCTTCTGTGGC YPDSF_3536 4065987 - 4065211 - | acetylglutamate kinase argC 4067157 - 4066153 - | N-acetyl-gamma-glutamyl-phosphate reductase YPDSF_3538 4067408 - 4068571 + | acetylornithine deacetylase YPDSF_3539 4068945 - 4071581 + | phosphoenolpyruvate carboxylase TERM 4413 4071777 - 4071752 - T 100 -16.2 -2.52543 | AGTCGCCTCAACCGA GCAGGAGGGC TAGCCG GCCCTCCTGC ACCTGCGGCTTGCGC YPDSF_3540 4071948 - 4071733 - | hypothetical protein TERM 4414 4071844 - 4071872 + g 91 -11 -4.1899 | gap 1 CGGGCTGACGAGCCA GCGCGAT-GGGCA TCCC TGCCCAAGCGCGC TTTTCGCTGGCGTCC TERM 4415 4071987 - 4071954 - H 87 -5.5 -5.47399 | opp_overlap 4071954 TCAACGTCAAAAAAA CAATTCAAAACCC TCTTCTTT AGATTTTGAATTG GTCTTTGACCTTAAA TERM 4416 4072243 - 4072265 + H 75 -9 -3.59979 | CGATAGTGCGAAAGC GCGGGGTTCC AAG GGGGCCACGC TTTGCACTGAACCCC TERM 4417 4072272 - 4072318 + H 100 -15.4 -3.05384 | gap 1, opp_overlap 4072277, overlap 4072277 4072282 GGGCCACGCTTTGCA CTGAACC-CCAGATCTTGGAT CTTTTT ATCCATGATCTGGAGGTTCGG TTCAATGAAACACCC TERM 4418 4072312 - 4072277 - H 93 -12.7 -3.05463 | opp_overlap 4072272 4072277 4072282 ACGCTTTGCACTGAA CCCCAGATCTTGGAT CTTTTT ATCCATGATCTGGAG GTTCGGTTCAATGAA TERM 4419 4072277 - 4072313 + H 77 -10.3 -3.19192 | gap 1, opp_overlap 4072277, overlap 4072272 4072282 ACGCTTTGCACTGAA CC-CCAGATCTTGGAT CTTTTT ATCCATGATCTGGAGG TTCGGTTCAATGAAA TERM 4420 4072282 - 4072292 + H 75 -5.4 -4.88736 | opp_overlap 4072277, overlap 4072277 4072272 TTGCACTGAACCCCA GATC TTG GATC TTTTTATCCATGATC TERM 4421 4073658 - 4073640 - g 71 -11 -2.73735 | overlap 4073630 4073628 4073651 AAACAGGCGGAATGA GTCCGGCA GAA TACCGGAC TCAGGTAGAAAAGCA YPDSF_3541 4072892 - 4073677 + | transposase for insertion sequence IS1661 rpsO 4074009 - 4073740 - | 30S ribosomal protein S15 TERM 4422 4074118 - 4074135 + r 91 -6.9 -5.56263 | opp_overlap 4074121, overlap 4074121 TCGCGGGATCGCAAG GCAGGCC GTGT GGCCTAC TTTTTATTTTCTACT truB 4075106 - 4074132 - | tRNA pseudouridine synthase B rbfA 4075516 - 4075106 - | ribosome-binding factor A TERM 4423 4075530 - 4075561 + r 81 -10.8 -3.36515 | opp_overlap 4075533, overlap 4075528 4075531 ATTTGGATTCTCCAG ACAGTTTGGGGGGC CAAG GCCCCCCAAATGGA TATTTGCAAATCAGA TERM 4424 4075531 - 4075560 + r 95 -14.3 -2.61695 | opp_overlap 4075533, overlap 4075530 4075528 TTTGGATTCTCCAGA CAGTTTGGGGGGC CAAG GCCCCCCAAATGG ATATTTGCAAATCAG TERM 4425 4075558 - 4075533 - R 93 -13.3 -2.87931 | opp_overlap 4075531 4075530 4075528 TGGATTCTCCAGACA GTTTGGGGGGC CAAG GCCCCCCAAAT GGATATTTGCAAATC infB 4078260 - 4075582 - | translation initiation factor IF-2 TERM 4426 4077751 - 4077764 + g 76 -3.1 -5.19261 | ACGTGCTTTATCGGT CTGAG CTGG CTTAG TTTTTTCGTCGGTTT nusA 4079772 - 4078285 - | transcription elongation factor NusA YPDSF_3547 4080246 - 4079794 - | hypothetical protein TERM 4427 4080284 - 4080271 - R 100 -8.1 -5.80248 | CAAGACATAAAAAAA GGGCT TAAT AGCCC AGTGATTCTGCTGTC TERM 4428 4080334 - 4080306 - R 100 -12.5 -3.90744 | opp_overlap 4080312 4080313, overlap 4080313 TCTGCTGTCAAATAA CAAAAAACCCCGA AAT TCGGGGCTTTATG CAACTGGACCCTGTT TERM 4429 4080312 - 4080328 + r 72 -7.9 -3.87815 | opp_overlap 4080306 4080313, overlap 4080313 GTCAAATAACAAAAA ACCCCGA AAT TCGGGGC TTTATGCAACTGGAC TERM 4430 4080313 - 4080327 + r 83 -11.4 -2.92475 | opp_overlap 4080306 4080313, overlap 4080312 TCAAATAACAAAAAA CCCCGA AAT TCGGGG CTTTATGCAACTGGA TERM 4431 4080327 - 4080313 - R 100 -11.4 -5.72254 | opp_overlap 4080313 4080312, overlap 4080306 TCAAATAACAAAAAA CCCCGA AAT TCGGGG CTTTATGCAACTGGA TERM 4432 4080351 - 4080363 + r 76 -10.5 -3.06501 | AACTGGACCCTGTTT GCCGC AAA GCGGC TTCGGTGCAACTCTC TERM 4433 4080463 - 4080449 - R 100 -7.2 -5.79526 | opp_overlap 4080451 ACATTTGAAAAAAAA CACTTT AGG AAAGTG GTTGCGGGGGCCGGA TERM 4434 4080698 - 4080728 + r 74 -9.9 -3.08603 | opp_overlap 4080696, overlap 4080697 GGCACTGATTCAACT GGTTGTTTTTACT GTCCA AGTAACAACAACC CTTTTAAAACTCTTT secG 4081113 - 4080778 - | preprotein translocase subunit SecG TERM 4435 4081303 - 4081323 + r 83 -11.1 -3.53761 | TCAGCGTAATTTCTT GGGGAAGAG TGC CTCTCCCCC TTTAAAAAAGGGTTA glmM 4082676 - 4081336 - | phosphoglucosamine mutase TERM 4436 4081787 - 4081777 - G 71 -6.8 -4.24342 | opp_overlap 4081776 TTTGGCACGAACAAA TGGG ATA CCCA GATCTTTCAGGGCTA folP 4083519 - 4082686 - | dihydropteroate synthase TERM 4437 4083595 - 4083578 - R 100 -11.3 -5.84381 | opp_overlap 4083578 TTAGCAACAAAAAAA CCCTAGG CAAG CCTAGGG TTATATTAGTCACAA TERM 4438 4083578 - 4083595 + r 90 -11.3 -3.71284 | opp_overlap 4083578 TTAGCAACAAAAAAA CCCTAGG CAAG CCTAGGG TTATATTAGTCACAA hflB 4085573 - 4083639 - | ATP-dependent metalloprotease TERM 4439 4085485 - 4085467 - G 72 -8.2 -3.83205 | ACGTCGGACATGAAA GTAGAGTA ATC CACTCTAC GGCCATTCGATTCGC rrmJ 4086259 - 4085630 - | 23S rRNA methyltransferase J YPDSF_3553 4086406 - 4086699 + | hypothetical protein TERM 4440 4086721 - 4086731 + T 74 -6.8 -4.35483 | opp_overlap 4086720 4086721 TTGTTTTAGAGAAAG GTGC CAT GCAC TTTGTTCTGATAAAA TERM 4441 4086741 - 4086766 + T 100 -10.5 -4.88405 | opp_overlap 4086747, overlap 4086742 ATGCACTTTGTTCTG ATAAAAGGCCG CTTG CGGCCTTTTAC TTTTCTTTACAACTT TERM 4442 4086742 - 4086765 + T 100 -14 -3.51958 | opp_overlap 4086747, overlap 4086741 TGCACTTTGTTCTGA TAAAAGGCCG CTTG CGGCCTTTTA CTTTTCTTTACAACT TERM 4443 4086760 - 4086747 - T 88 -9.5 -4.36914 | opp_overlap 4086742 4086741 TTTGTTCTGATAAAA GGCCG CTTG CGGCC TTTTACTTTTCTTTA greA 4087303 - 4086827 - | transcription elongation factor GreA TERM 4444 4087154 - 4087169 + g 72 -4 -4.88918 | gap 1, overlap 4087146 TTGTTGCTCACGGGC TGCGTGA TAT TC-CGCA TTTTCTTTCAAGTCG TERM 4445 4087438 - 4087418 - H 100 -3.9 -6.5058 | ATAAACAAAAAAAAA CCTAGGGCC AAA AACCCCAAG TCAGGATCAATTTTG TERM 4446 4088510 - 4088491 - g 70 -2.2 -5.03715 | gap 1 ATCATGCTGAAAAAA TCAGACAAT ATG ATCG-CTGA CACCGTCTTCAGAAC YPDSF_3555 4087561 - 4089009 + | D-alanyl-D-alanine carboxypeptidase/endopeptidase YPDSF_3556 4089015 - 4089677 + | DNA-binding transcriptional regulator BasR YPDSF_3557 4089674 - 4090741 + | sensor protein BasS/PmrB TERM 4447 4090814 - 4090783 - T 100 -9.5 -5.0133 | CACCCTGCCAAAAAA TAAGGGCCACCAC GAAAAA ATGGCAGCCCTTA TTCAAAGAATAACTG obgE 4092008 - 4090836 - | GTPase ObgE TERM 4448 4092032 - 4092057 + r 79 -6.9 -4.62441 | gap 1, opp_overlap 4092028, overlap 4092032 TCCGTAAATCATTCA CC-GGCTGCTTT TGC AAAGCAACCAGG TTTATTTCTGTCCGA YPDSF_3559 4092995 - 4092009 - | hypothetical protein TERM 4449 4093054 - 4093032 - R 100 -12 -4.84529 | opp_overlap 4093032 CCAGAAATGTAAAAA GCCCCGCAAC GAA ATTGCAGGGC TTACATCTATTTACA rpmA 4093340 - 4093083 - | 50S ribosomal protein L27 rplU 4093671 - 4093360 - | 50S ribosomal protein L21 YPDSF_3562 4093931 - 4094902 + | octaprenyl diphosphate synthase TERM 4450 4094948 - 4094930 - T 89 -10.3 -3.96224 | opp_overlap 4094930 GAAATTATTTAGAAA CCCGGAT TCACC ATCCGGG TTTATCCCATTAATG TERM 4451 4094930 - 4094948 + T 89 -10.3 -3.93236 | opp_overlap 4094930 GAAATTATTTAGAAA CCCGGAT TCACC ATCCGGG TTTATCCCATTAATG YPDSF_3563 4095346 - 4094999 - | hypothetical protein TERM 4452 4095397 - 4095387 - H 73 -2.6 -5.16969 | GACACAAAAAAGAAA TTTT TAG AAAA CATTTAAATTTTTTT YPDSF_3564 4095530 - 4095805 + | DNA-binding protein TERM 4453 4095903 - 4095935 + T 95 -7.8 -5.08178 | opp_overlap 4095903 ATCATTACAATATCA GGGGCTACTG TTCGTACTCTTTT CAGTAGCCCC TTTTTATCTCTATAT TERM 4454 4096189 - 4096174 - T 74 -10.4 -2.59431 | overlap 4096170 GCCTCGCAGAAGCGA GGCCCA TGGA TGGGCC GAGTAACGCTTGCAG YPDSF_3565 4097177 - 4096239 - | malate dehydrogenase YPDSF_3566 4097641 - 4098111 + | arginine repressor TERM 4455 4098158 - 4098140 - f 75 -7.4 -4.3129 | opp_overlap 4098140 CACCGAGCAGTAAAA TGCGGC CTTATGT GCCGCA TTATCTCACCCTCGC YPDSF_3567 4098500 - 4098763 + | hypothetical protein TERM 4456 4098867 - 4098893 + T 72 -10.1 -2.88849 | gap 1, opp_overlap 4098856, overlap 4098862 4098868 ACATCCATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCTCTGCC TERM 4457 4098868 - 4098894 + T 84 -10.1 -3.82218 | gap 1, opp_overlap 4098856, overlap 4098862 4098867 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCTCTGCCT TERM 4458 4098957 - 4098980 + T 85 -9.6 -4.12188 | overlap 4098959 TTGTCAGCAGTCTGC AATGCCCCAT TAAC ATGGGGCATA TTTTCAAGATGATGA TERM 4459 4098959 - 4098978 + T 93 -12.2 -3.6581 | overlap 4098957 GTCAGCAGTCTGCAA TGCCCCAT TAAC ATGGGGCA TATTTTCAAGATGAT YPDSF_3568 4100441 - 4099059 - | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase TERM 4460 4100887 - 4100897 + G 73 -5.4 -4.72272 | opp_overlap 4100887 4100885 CTCCGAAGAAGAAGA TGAC ATT GTCA TTTTTGATGGCGGAA TERM 4461 4101576 - 4101566 - g 73 -5.4 -4.63218 | TTCGTGGGAACAAAA TCCA TGG TGGA AGATGCGGAAGGGTT YPDSF_3569 4100612 - 4101625 + | fructose-1,6-bisphosphatase TERM 4462 4101685 - 4101665 - f 100 -13.3 -3.40836 | opp_overlap 4101665, overlap 4101657 TCAAAAATAAGCTAA CAGCGGCCT TTT AAGCCGCTG TTTTTTATTTCTAAC TERM 4463 4101665 - 4101685 + F 100 -11.1 -5.72622 | opp_overlap 4101657 4101665 TCAAAAATAAGCTAA CAGCGGCCT TTT AAGCCGCTG TTTTTTATTTCTAAC YPDSF_3570 4101825 - 4102352 + | inorganic pyrophosphatase TERM 4464 4102377 - 4102428 + T 100 -9.4 -5.84381 | gap 1, opp_overlap 4102377 4102395 TCGCCTATAAAAAAA CACCGCCTATCGTGAACAGGCCCCA AAA TAGGGCC-GTTTACCTTGTGCGGTG TTTTTTTGTTACTGC TERM 4465 4102428 - 4102377 - T 100 -7.2 -5.60993 | gap 1, opp_overlap 4102377, overlap 4102395 TCGCCTATAAAAAAA CACCGCCTATCGTGAACAGGCCCCA AAA TAGGGCC-GTTTACCTTGTGCGGTG TTTTTTTGTTACTGC TERM 4466 4102411 - 4102395 - T 73 -10.1 -3.04144 | opp_overlap 4102377, overlap 4102377 CGCCTATCGTGAACA GGCCCCA AAA TAGGGCC GTTTACCTTGTGCGG YPDSF_3571 4102826 - 4102470 - | hypothetical protein YPDSF_3572 4106725 - 4102829 - | hypothetical protein YPDSF_3573 4108458 - 4106722 - | hypothetical protein TERM 4467 4109248 - 4109222 - g 82 -7.3 -4.68424 | CAAGCCATGGAAAAA GCCGGTGATCA ACGGG TGATTACCAGC GAAATTACGGTTGCC YPDSF_3574 4108733 - 4109371 + | methionine sulfoxide reductase A TERM 4468 4109877 - 4109898 + G 71 -5.2 -4.43844 | CCGCTTTCTCCCCTT CGTTCAAA CTCGTT TTTGAGCG TTTTATGGCTCCTGA TERM 4469 4110281 - 4110296 + G 74 -7.6 -4.12738 | CCTTCCTCCATGACT TCACGT GAAA ACGTGA TTTACTTTGATCTAC YPDSF_3575 4109630 - 4110961 + | hypothetical protein TERM 4470 4110998 - 4111023 + T 77 -10.4 -3.14468 | opp_overlap 4111001, overlap 4111001 TGATCACGGTAAACA TAACGGCCCC TGAGTT GGGGCCGTGA TTAAATCTGCTCAGG TERM 4471 4111020 - 4111001 - T 100 -12.1 -3.82946 | opp_overlap 4110998 4111001 TCACGGTAAACATAA CGGCCCC TGAGTT GGGGCCG TGATTAAATCTGCTC TERM 4472 4111001 - 4111020 + T 83 -12.1 -2.77658 | opp_overlap 4111001, overlap 4110998 TCACGGTAAACATAA CGGCCCC TGAGTT GGGGCCG TGATTAAATCTGCTC YPDSF_3576 4111281 - 4111069 - | hypothetical protein TERM 4473 4112163 - 4112135 - g 84 -15.3 -2.84812 | opp_overlap 4112133 4112133, overlap 4112157 ACTGACATCAGCAGA GGTGCAGCAGGTC ATC GACCAACTGCACC AACTTGTGCAGCAAT YPDSF_3577 4111617 - 4112180 + | hypothetical protein YPDSF_3578 4112923 - 4112183 - | PAPS (adenosine 3'-phosphate 5'-phosphosulfate) 3'(2'),5'-bisphosphate nucleotidase cpdB 4113370 - 4115328 + | bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein TERM 4474 4115399 - 4115455 + F 100 -15.7 -3.02096 | opp_overlap 4115399 4115400, overlap 4115406 4115449 GGAGTTATATCACAA TCTATAACATGCATTTATTATGCATGT TAT AGGTGTATAATAAATACATGTTATAGA TATATAATTACTCAA TERM 4475 4115455 - 4115399 - f 100 -13.6 -3.47573 | opp_overlap 4115399 4115406 4115449, overlap 4115400 GGAGTTATATCACAA TCTATAACATGCATTTATTATGCA TGTTATAGG TGTATAATAAATACATGTTATAGA TATATAATTACTCAA TERM 4476 4115430 - 4115400 - f 95 -14.3 -2.68223 | opp_overlap 4115399 4115406, overlap 4115399 GAGTTATATCACAAT CTATAACATGCAT TTATT ATGCATGTTATAG GTGTATAATAAATAC YPDSF_3580 4115483 - 4116148 + | cell morphogenesis/cell wall metabolism regulator TERM 4477 4116228 - 4116196 - T 100 -22.9 -4.44046 | opp_overlap 4116203, overlap 4116197 CTTATCGTAAATAAA CGCCAAAGGGCGACA CCC TGTCGCCCTTTGGCA TAATCGGTACCAAGG TERM 4478 4116227 - 4116197 - T 100 -24.2 -3.25946 | opp_overlap 4116203, overlap 4116196 TTATCGTAAATAAAC GCCAAAGGGCGACA CCC TGTCGCCCTTTGGC ATAATCGGTACCAAG TERM 4479 4116203 - 4116221 + T 100 -14.6 -3.62275 | opp_overlap 4116197 4116196 TAAATAAACGCCAAA GGGCGACA CCC TGTCGCCC TTTGGCATAATCGGT YPDSF_3581 4116866 - 4116246 - | peptidyl-prolyl cis-trans isomerase YPDSF_3582 4117224 - 4117964 + | hypothetical protein YPDSF_3583 4118104 - 4118559 + | hypothetical protein TERM 4480 4118607 - 4118575 - T 100 -11.3 -4.50058 | opp_overlap 4118582, overlap 4118579 4118581 4118582 TACCGATAACCAAAA TAAATATCCTCCGGC ATA GCCGGAGGTTTTTCA TATGCGCCTATAAGG TERM 4481 4118603 - 4118579 - T 100 -9.9 -4.80487 | opp_overlap 4118582, overlap 4118575 4118581 4118582 GATAACCAAAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCATATGCGCCTAT TERM 4482 4118601 - 4118581 - T 100 -12.5 -3.99559 | opp_overlap 4118582, overlap 4118579 4118575 4118582 TAACCAAAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 4483 4118582 - 4118600 + T 100 -16 -4.8048 | opp_overlap 4118581 4118579 4118575 4118582 AACCAAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 4484 4118600 - 4118582 - T 100 -16 -2.98108 | opp_overlap 4118582, overlap 4118581 4118579 4118575 AACCAAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC YPDSF_3584 4119139 - 4118681 - | transposase for the IS1541 insertion element TERM 4485 4119270 - 4119252 - R 100 -16 -3.07307 | opp_overlap 4119252 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAG TERM 4486 4119252 - 4119270 + r 100 -16 -4.36914 | opp_overlap 4119252 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAG TERM 4487 4119314 - 4119286 - R 95 -14 -2.57132 | opp_overlap 4119291, overlap 4119291 TTTTCTGGGCACAAG CAAAACGCCAGC ACTAG GCTGGCGTTTTA ACAGGTTACAGCCGC TERM 4488 4119291 - 4119309 + r 100 -11.7 -4.11484 | opp_overlap 4119286 4119291 TGGGCACAAGCAAAA CGCCAGC ACTAG GCTGGCG TTTTAACAGGTTACA TERM 4489 4119309 - 4119291 - R 100 -11.7 -4.48987 | opp_overlap 4119291, overlap 4119286 TGGGCACAAGCAAAA CGCCAGC ACTAG GCTGGCG TTTTAACAGGTTACA rplI 4119787 - 4119335 - | 50S ribosomal protein L9 rpsR 4120054 - 4119827 - | 30S ribosomal protein S18 rpsF 4120777 - 4120385 - | 30S ribosomal protein S6 TERM 4490 4120432 - 4120457 + g 70 -9.1 -3.50832 | gap 1, overlap 4120428 4120431 CATTGGCTTCTGACG CGAA-GTCGTGA CGC TCACGGCGTTCG TCTTTCGCTTTAACC YPDSF_3588 4121887 - 4121144 - | esterase YPDSF_3589 4122705 - 4121926 - | transposase/IS protein TERM 4491 4122624 - 4122638 + g 77 -11.4 -3.3506 | overlap 4122637 CTGCCTGTTGTGACA GCGCAG GCG CTGCGC TTATAAGGCTTTCCA YPDSF_3590 4123727 - 4122705 - | transposase TERM 4492 4123749 - 4123731 - H 100 -13.2 -4.01078 | AAAAGTGACCATAAA CTCTCCTG AAT CAGGAGAG CAGATTACCCCCTGG YPDSF_3591 4124044 - 4124355 + | lipoprotein YPDSF_3592 4126070 - 4124427 - | isovaleryl CoA dehydrogenase TERM 4493 4126231 - 4126210 - R 71 -3 -5.08088 | opp_overlap 4126211, overlap 4126211 AATTCCCAACAAAAA GCCAACAT ACAAAG ATGTTGGT TTGAGGTTATTGACA TERM 4494 4126310 - 4126336 + r 72 -10.1 -2.88849 | gap 1, opp_overlap 4126299, overlap 4126305 4126311 ACATCCATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCTCTGCC TERM 4495 4126311 - 4126337 + r 84 -10.1 -3.82218 | gap 1, opp_overlap 4126299, overlap 4126305 4126310 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCTCTGCCT TERM 4496 4126400 - 4126421 + r 75 -8.8 -3.60098 | TTGTCAGCAGTCTGA GCCAACAT ACAAAG ATGTTGGC TTTAGGCTGCGGAGT YPDSF_3593 4127218 - 4126478 - | 23S rRNA (guanosine-2'-O-)-methyltransferase TERM 4497 4127303 - 4127279 - R 74 -10 -3.08072 | gap 1 AATAATTAAATTATA TG-CGGGCGAC AAAA GCCGCCCGGCA AGTAGCACACCACCA YPDSF_3594 4129872 - 4127347 - | exoribonuclease R TERM 4498 4127527 - 4127541 + g 91 -9.2 -4.82901 | GTTTACCGGTTTTTT CGCCCG ACG TGGGCG TTTTTGTCCACCCGC TERM 4499 4128469 - 4128458 - G 76 -7.2 -4.36914 | opp_overlap 4128457 TGTTTTTCCACAAAA CGCG CCGC CGCG ATATTCGCCAGAATC TERM 4500 4130143 - 4130112 - R 84 -5.1 -5.30155 | overlap 4130116 TTATTAAGTAAAAAA CCTACTCAACAAG TAATAG CTTGTAGAGCGGG GAATTATCTTTAACC YPDSF_3595 4130577 - 4130113 - | transcriptional repressor NsrR TERM 4501 4130771 - 4130800 + r 100 -13.7 -3.53224 | opp_overlap 4130771 4130774 4130778, overlap 4130774 4130778 GCTGGATGTATTAGA CAATAAACCGGAC ATCA GCCCGGTTTATTG TTTCGAACACAAATA TERM 4502 4130800 - 4130771 - R 100 -15.9 -2.80816 | opp_overlap 4130771 4130774 4130778, overlap 4130774 4130778 GCTGGATGTATTAGA CAATAAACCGGAC ATCA GCCCGGTTTATTG TTTCGAACACAAATA TERM 4503 4130774 - 4130797 + r 81 -9.6 -3.90744 | opp_overlap 4130771 4130774 4130778, overlap 4130771 4130778 GGATGTATTAGACAA TAAACCGGAC ATCA GCCCGGTTTA TTGTTTCGAACACAA TERM 4504 4130797 - 4130774 - R 91 -11.8 -3.55447 | opp_overlap 4130774 4130771 4130778, overlap 4130771 4130778 GGATGTATTAGACAA TAAACCGGAC ATCA GCCCGGTTTA TTGTTTCGAACACAA TERM 4505 4130793 - 4130778 - R 87 -8.2 -4.41114 | opp_overlap 4130778 4130774 4130771, overlap 4130774 4130771 GTATTAGACAATAAA CCGGAC ATCA GCCCGG TTTATTGTTTCGAAC TERM 4506 4130778 - 4130793 + r 73 -6 -4.56978 | opp_overlap 4130774 4130771 4130778, overlap 4130774 4130771 GTATTAGACAATAAA CCGGAC ATCA GCCCGG TTTATTGTTTCGAAC YPDSF_3596 4132185 - 4130887 - | adenylosuccinate synthetase TERM 4507 4131673 - 4131696 + g 80 -10.4 -3.67976 | opp_overlap 4131666, overlap 4131667 4131677 GTAATGCACCAACTG GAAGTTGTGG TATT CCACAATTTC TTTCAGCTTGATAGC TERM 4508 4131677 - 4131692 + g 79 -7.6 -4.46233 | opp_overlap 4131666, overlap 4131667 4131673 TGCACCAACTGGAAG TTGTGG TATT CCACAA TTTCTTTCAGCTTGA TERM 4509 4131815 - 4131825 + g 76 -6.8 -4.57341 | GTACCGATAGCTTTT GCAC CAC GTGC TTTTTCACGCGCATT YPDSF_3597 4132485 - 4132285 - | membrane protein TERM 4510 4132543 - 4132525 - R 95 -9.5 -4.43213 | TTCAACACATGAAAA GGCCCGC ACTAG ACGGGCC TCGGTGTTACGTTCA YPDSF_3598 4133661 - 4132657 - | FtsH protease regulator HflC YPDSF_3599 4134924 - 4133665 - | FtsH protease regulator HflK TERM 4511 4134755 - 4134768 + g 74 -2.3 -5.19261 | CCGCTACCTTTGCCA CCGAG GCTA CTCAG TTTTTTGCTCAGTTT YPDSF_3600 4136451 - 4135165 - | putative GTPase HflX hfq 4136855 - 4136550 - | RNA-binding protein Hfq miaA 4137912 - 4136971 - | tRNA delta(2)-isopentenylpyrophosphate transferase TERM 4512 4137411 - 4137393 - G 100 -3.9 -6.23545 | gap 1, opp_overlap 4137400 4137401, overlap 4137395 CTGAAATAAAAAAAA CT-TCCAG TGCT CTGGAGAG CCTTTGGGGATCATT mutL 4139812 - 4137905 - | DNA mismatch repair protein YPDSF_3604 4141741 - 4139828 - | N-acetylmuramoyl-L-alanine amidase-family protein TERM 4513 4140025 - 4140039 + g 71 -11.4 -2.72511 | overlap 4140024 CTGCCGTTACCGTAC TGCCCG ACG CGGGCA CTTTCAACCGCTGGC TERM 4514 4141272 - 4141296 + g 73 -2.8 -5.04601 | gap 1 ACCGTGTAGTTATTG CCCG-ACTGTT GGGT GACAGCACGGG TTTTTACTTTCTGCG TERM 4515 4141321 - 4141335 + g 71 -5.7 -4.36433 | TCTGCGTCAGTTCCA GTACC AGGCG GGTAC TTTGTTCATCTTTCG YPDSF_3605 4142219 - 4141749 - | putative ATPase YPDSF_3606 4143744 - 4142230 - | hypothetical protein TERM 4516 4142688 - 4142700 + gH 80 -9.1 -3.97602 | TAAGTGCATCCGCAT CCCAC AAG GTGGG TTTATCACTCTGTTG TERM 4517 4143819 - 4143837 + Gr 71 -8.2 -3.53012 | opp_overlap 4143818 TAGGTTTCCAGCAAG TCGGTATT TGC GATACCGA TTTGACGGCGGAAGA TERM 4518 4143915 - 4143897 - gR 82 -10.3 -3.59087 | AATATCATGGCGAAA TGGCGTG GATGG CACGCCA CGGTATGCTGCGTGC TERM 4519 4144041 - 4144024 - gR 75 -8.5 -3.86202 | opp_overlap 4144027, overlap 4144027 TGCCAGTACATTAAA TAACCCA GAAT TGGGTTA TGTCAGCCGCTATGC YPDSF_3607 4143743 - 4144978 + | iron-sulfur cluster-binding protein TERM 4520 4145063 - 4145044 - TR 84 -2.9 -5.69262 | gap 1 GCATAAAAATAAAAA TGC-CTTG GCAAT CAAGTGCA AAAAAAAGCACAAGT TERM 4521 4145323 - 4145339 + Tr 76 -10.9 -2.62616 | TCGAACTCGCGACCC CGACCTT GGC AAGGTCG TGCTCTACCAACTGA TERM 4522 4145399 - 4145414 + Tr 70 -7.6 -3.73647 | TGTACTAAATCTGTC TTCGCA TGCT TGCGAA TTCTTCATCGGTACG TERM 4523 4145956 - 4145939 - TR 77 -6.3 -4.71776 | TAAGATTGAATAAAA TGCTCAC GATA GTAAGCA AGCTCGGCGACTGAC YPDSF_3608 4146606 - 4145923 - | oligoribonuclease YPDSF_3609 4146668 - 4147720 + | ribosome-associated GTPase YPDSF_3610 4148035 - 4147907 - | hypothetical protein TERM 4524 4147982 - 4148010 + g 71 -5.8 -4.38141 | overlap 4147984 GAAGGGTCTGACAGG GTGGGCGCAGAG CGATA CAATGCGCCCCC TTATTTTATCTAACG YPDSF_3611 4148045 - 4148926 + | phosphatidylserine decarboxylase TERM 4525 4149637 - 4149627 - g 76 -4.6 -5.04175 | overlap 4149628 CGAATTATACAAAAA GCGC GAA GCAC GGGTTCAGGCTCAGC TERM 4526 4150774 - 4150784 + G 70 -4.6 -4.65838 | opp_overlap 4150769, overlap 4150769 CCAACACAAGTTGCG CGCG CAA TGCG TTTTTACCGTCTGTC TERM 4527 4151142 - 4151176 + G 79 -12.3 -3.30701 | gap 1, opp_overlap 4151141 4151144, overlap 4151144 4151171 AGTGGTCTATCATAT TAT-CCGCCGTTGGAT GCTG ATCCAGCGGCGGCGTA TTGCCTTTGATCGCG TERM 4528 4151173 - 4151144 - g 73 -12.1 -2.66316 | opp_overlap 4151142 4151144 4151171, overlap 4151141 TGGTCTATCATATTA TCCGCCGTTGGAT GCTG ATCCAGCGGCGGC GTATTGCCTTTGATC TERM 4529 4151144 - 4151173 + G 81 -14.3 -2.52602 | opp_overlap 4151144 4151141, overlap 4151142 4151171 TGGTCTATCATATTA TCCGCCGTTGGAT GCTG ATCCAGCGGCGGC GTATTGCCTTTGATC TERM 4530 4151226 - 4151199 - g 71 -11.3 -2.71364 | gap 1, opp_overlap 4151197 TGATCGCGCCAAGCA GCGCCGCGCCGA TATTC TC-GCGCAGCGC GCCCGTGGTGAGGAA YPDSF_3612 4148968 - 4152309 + | hypothetical protein TERM 4531 4152333 - 4152359 + T 82 -5.9 -4.97405 | gap 1, opp_overlap 4152333 4152335, overlap 4152335 AGTAAGAAATAAAAA TGCCCTGCGCCT TCAC AGGT-CAGGGTA TTTGTTTTTGTAAGT TERM 4532 4152354 - 4152333 - T 91 -6.5 -5.48514 | opp_overlap 4152333 4152335, overlap 4152335 AGTAAGAAATAAAAA TGCCCTGCG CCTT CACAGGTCA GGGTATTTGTTTTTG YPDSF_3613 4153407 - 4152430 - | lysyl-tRNA synthetase YPDSF_3614 4153865 - 4155688 + | fumarate reductase flavoprotein subunit YPDSF_3615 4155681 - 4156415 + | fumarate reductase iron-sulfur subunit TERM 4533 4156491 - 4156502 + G 74 -2.2 -5.10064 | overlap 4156471 4156478 CTGGTGGCAACAGCT TGGT TTCT ACCG TTTTTATATGTTGCG YPDSF_3616 4156432 - 4156824 + | fumarate reductase subunit C YPDSF_3617 4156841 - 4157197 + | fumarate reductase subunit D TERM 4534 4157223 - 4157245 + T 100 -13.4 -4.0825 | CACATGCCATATTCG CGGCCTGCTG TTC TGGCAGGCCG TTCTTTGGTTAAAGC YPDSF_3618 4157823 - 4157362 - | chaperone TERM 4535 4157564 - 4157550 - G 80 -4.2 -5.09762 | AGGCCAATAGAAAAA CACTGG CAG CCATTG CGACGAGGGTAATAA YPDSF_3619 4158489 - 4157923 - | elongation factor P TERM 4536 4158381 - 4158396 + g 76 -8.2 -4.1466 | opp_overlap 4158371 4158380 4158381 TAACACGCGCAAAAG CCTGGC CTTT GCCGGG TTTTACGAATTCGCT YPDSF_3620 4158525 - 4159553 + | hypothetical protein YPDSF_3621 4160236 - 4159838 - | lipoprotein TERM 4537 4160783 - 4160752 - R 100 -16.8 -4.38154 | opp_overlap 4160757 4160777, overlap 4160757 ACAGTCTTCACAAAA TAAAAGCGAGCAGG TCAC CCTACTCGCTTTTA TCAACAGCTTTACCT TERM 4538 4160757 - 4160778 + r 93 -10.1 -4.37658 | opp_overlap 4160752 4160757, overlap 4160777 CTTCACAAAATAAAA GCGAGCAGG TCAC CCTACTCGC TTTTATCAACAGCTT TERM 4539 4160778 - 4160757 - R 100 -12.3 -5.18371 | opp_overlap 4160757 4160777, overlap 4160752 CTTCACAAAATAAAA GCGAGCAGG TCAC CCTACTCGC TTTTATCAACAGCTT groEL 4162506 - 4160860 - | chaperonin GroEL TERM 4540 4161875 - 4161885 + g 71 -6.8 -4.25056 | opp_overlap 4161874 TCAAGTTCAATAGAG CCAG TTT CTGG TTTATTGATGAAGTA groES 4162846 - 4162553 - | co-chaperonin GroES fxsA 4163703 - 4163101 - | FxsA aspA 4164127 - 4165563 + | aspartate ammonia-lyase TERM 4541 4165588 - 4165616 + F 100 -10.4 -5.04601 | gap 2, opp_overlap 4165592 TCGGTAGCCCTCTAA GGCACGCATGCTCC TCT GGA-CA-GCGTGCC TTTTTACTTTCTGGC YPDSF_3626 4165683 - 4166984 + | anaerobic C4-dicarboxylate transporter TERM 4542 4166988 - 4167019 + F 77 -10.2 -3.18511 | gap 1, overlap 4166993 CTGGTTCTGTAATCT GTCTGATGGGGCGCA TCA TGCGCCCCAATA-AC TTCGGTCTATCTCTC TERM 4543 4166993 - 4167015 + F 91 -13.4 -2.56571 | overlap 4166988 TCTGTAATCTGTCTG ATGGGGCGCA TCA TGCGCCCCAA TAACTTCGGTCTATC TERM 4544 4167063 - 4167076 + F 71 -9.5 -2.91126 | overlap 4167059 TCATCTTCTGACTGG CCCCG GCTT CGGGG TATAGTATGATTTGT TERM 4545 4167390 - 4167355 - g 73 -9.2 -3.75629 | gap 1 TACTGGGAAGGTAAA CTCGAACAAGAGTATGA GGT TCAG-CTCTTGTTCAAG AGCAATACTGACCAT YPDSF_3627 4167169 - 4167528 + | divalent-cation tolerance protein CutA dipZ 4167504 - 4169291 + | thiol:disulfide interchange protein precursor TERM 4546 4169335 - 4169293 - T 100 -8.3 -4.77173 | overlap 4169295 CGGTTACAAAATAAA TAGCTGTCGCCACGGCGAG TAGGT CTCGCCGTGGCATAATCAA CGCTCAATCACGACA TERM 4547 4169333 - 4169295 - T 90 -10.9 -3.99938 | overlap 4169293 GTTACAAAATAAATA GCTGTCGCCACGGCGAG TAGGT CTCGCCGTGGCATAATC AACGCTCAATCACGA YPDSF_3629 4171500 - 4169353 - | formate dehydrogenase H YPDSF_3630 4172080 - 4171523 - | 4Fe-4S ferrodoxin YPDSF_3631 4174118 - 4172103 - | putative oxidoreductase Fe-S binding subunit TERM 4548 4173529 - 4173541 + g 76 -5.5 -4.87803 | AGGTTAACCGGTGTT GCGTC GCG GATGC TTTTATTTGACGATG TERM 4549 4173611 - 4173627 + g 83 -9.4 -4.35461 | overlap 4173596 CATTGTGCTCATTCA GCGCCA TGTGT TGGCGC TTTTGCTGCTGTTGA TERM 4550 4173677 - 4173691 + g 71 -7.1 -4.25104 | CCACCAAGGTCAGAG CCTGC GTAGG GCAGG TTTTAATACAGGCAG TERM 4551 4173990 - 4174008 + g 77 -11.8 -3.14126 | opp_overlap 4173989, overlap 4173981 ATCGCCTTTGAATAC TTTCACCC GTG GGGTGAAA TATTCCGGTTTATCA TERM 4552 4174445 - 4174435 - H 71 -8.2 -3.42621 | opp_overlap 4174441 AACGTCAACCGACAA CGGG GTG CCCG TAAAGATAGGGCTAT YPDSF_3632 4174538 - 4175113 + | putative transcriptional regulator TERM 4553 4175300 - 4175284 - T 76 -10.9 -2.62616 | opp_overlap 4175283 4175282 4175279 TCAGTCGGTAGAGCA GGGGATT GAA AATCCCC GTGTCCTTGGTTCGA TERM 4554 4175345 - 4175364 + T 100 -11.4 -4.84527 | opp_overlap 4175344 4175345 ACCATTATTTATAAG GCCTCGCT GCAA AGCGGGGC TTTTTCGTATCTGGA YPDSF_3633 4178322 - 4175767 - | enhancing factor TERM 4555 4176306 - 4176327 + g 70 -2.9 -4.89567 | overlap 4176308 4176308 ACATTATAGGGTGAC TACGCAGCA TTTC TGCTGCCGA TTTTATATTTTCCAA YPDSF_3634 4178519 - 4178352 - | hypothetical protein TERM 4556 4179210 - 4179225 + r 89 -7.5 -5.05116 | opp_overlap 4179164 4179210 TTTAATGTCAACGAA CCCGC CAATGT GCGGG TTTTGTTATTTCTAA YPDSF_3635 4179539 - 4179237 - | transposase YPDSF_3636 4179852 - 4179610 - | hypothetical protein YPDSF_3637 4180006 - 4181040 + | rhamnose-proton symporter TERM 4557 4181106 - 4181136 + GT 86 -11.3 -3.25896 | gap 1, opp_overlap 4181105, overlap 4181109 TAAAGATGATGATAT TGACGGGCAGCGTT GAAA AAC-CTGCCCGTTA TCTTATGGCTAATCG TERM 4558 4181109 - 4181133 + GT 88 -10.8 -3.76568 | gap 1, opp_overlap 4181105, overlap 4181106 AGATGATGATATTGA CGGGCAGCGTT GAAA AAC-CTGCCCG TTATCTTATGGCTAA YPDSF_3638 4181015 - 4181164 + | hypothetical protein YPDSF_3639 4182061 - 4181189 - | transcriptional activator RhaR YPDSF_3640 4183015 - 4182194 - | transcriptional activator RhaS YPDSF_3641 4183019 - 4183141 + | hypothetical protein rhaB 4183271 - 4184899 + | rhamnulokinase YPDSF_3643 4184896 - 4186152 + | L-rhamnose isomerase TERM 4559 4186643 - 4186630 - g 72 -3.8 -4.88067 | AGTTATGTACAAAAA CTGG AGAACG CCAG CTTCACGCGCCTGTT YPDSF_3644 4186165 - 4186989 + | rhamnulose-1-phosphate aldolase YPDSF_3645 4187056 - 4188204 + | alcohol dehydrogenase YPDSF_3646 4188218 - 4188532 + | hypothetical protein TERM 4560 4188690 - 4188671 - T 100 -15 -3.52073 | opp_overlap 4188669 4188683 TCCTGAATACTAGAA CCGCGCCA TCCG TGGCGCGG CCGTTTAAAGCTAAT YPDSF_3647 4189327 - 4188779 - | single-strand DNA-binding protein uvrA 4189785 - 4192628 + | excinuclease ABC subunit A TERM 4561 4192667 - 4192633 - T 74 -9.4 -3.35088 | gap 1, overlap 4192636 AAACCGTTTAATGAA CCACTCTGGGGCAAT CAATGT ATTGCTCCAGAG-GG TATGACATTCAGCGT TERM 4562 4192665 - 4192636 - T 77 -10.8 -2.84098 | overlap 4192633 CCGTTTAATGAACCA CTCTGGGGCAAT CAATGT ATTGCTCCAGAG GGTATGACATTCAGC YPDSF_3649 4193080 - 4192721 - | hypothetical protein YPDSF_3650 4194800 - 4193607 - | aromatic amino acid aminotransferase alr 4196065 - 4194986 - | alanine racemase TERM 4563 4195282 - 4195272 - G 70 -8.2 -3.727 | GCGATCACACCTAAA CGCG TAT CGCG CTCACTGACCCAGGT TERM 4564 4195439 - 4195459 + g 70 -9.7 -3.28712 | opp_overlap 4195452 CAGCACAATCCCTGG GCGCACC CAATCAC GGTGCGC TTGTGGCCACCGCAG YPDSF_3652 4197568 - 4196162 - | replicative DNA helicase TERM 4565 4198690 - 4198668 - g 70 -2.6 -4.99134 | overlap 4198669 ATTCTAAACCAAAAA GGGGGGAT CTATGTC ACCCGCCC TTCACTGAATGTCTA YPDSF_3653 4197900 - 4198883 + | quinone oxidoreductase, NADPH-dependent TERM 4566 4198949 - 4198922 - T 100 -14.9 -4.69664 | opp_overlap 4198915 4198914 4198922 4198924 4198926 TACATGATTGAAAAA CAGAGGGCCCC GATTAA GGAGCCCTCTG TCATTACACTTTCTT TERM 4567 4198922 - 4198949 + T 89 -12.7 -2.78395 | opp_overlap 4198922, overlap 4198915 4198914 4198924 4198926 TACATGATTGAAAAA CAGAGGGCCCC GATTAA GGAGCCCTCTG TCATTACACTTTCTT TERM 4568 4198924 - 4198947 + T 71 -9.5 -2.9296 | opp_overlap 4198922, overlap 4198922 4198915 4198914 4198926 CATGATTGAAAAACA GAGGGCCCC GATTAA GGAGCCCTC TGTCATTACACTTTC TERM 4569 4199025 - 4199041 + T 71 -3 -5.03994 | gap 1, opp_overlap 4199019, overlap 4199026 TCACGTAAATGAACG T-GCCGT TTAT ACGGCTA TTTTTATCTCTAACA TERM 4570 4199026 - 4199039 + T 76 -8.1 -4.14422 | opp_overlap 4199019, overlap 4199025 CACGTAAATGAACGT GCCGT TTAT ACGGC TATTTTTATCTCTAA pspG 4199446 - 4199228 - | phage shock protein G TERM 4571 4199852 - 4199819 - R 100 -15.5 -3.13908 | overlap 4199847 AAGTGAATGAGTGAA CCCCGAATCACTTAC GCCA GTAAATAATTCGGGG GCCCAATTTGCCGAA YPDSF_3655 4200999 - 4199962 - | tRNA-dihydrouridine synthase A TERM 4572 4201311 - 4201277 - g 95 -12.2 -4.36411 | TATCAATCAGGAAAA GCTGCTCGCACAAGCT GAA AGCCTGTGCCAACAAC GAAACGTCCGGCTGA YPDSF_3656 4201251 - 4201763 + | zinc uptake transcriptional repressor TERM 4573 4201917 - 4201889 - T 78 -9 -3.88015 | gap 1, opp_overlap 4201893, overlap 4201891 4201893 TAGAGAATCATGAAA TAGAGCCGTACCT CAAC AGGCACGGCT-TA TTATTCTGGGAGGAA TERM 4574 4201916 - 4201891 - T 78 -9.7 -3.51793 | opp_overlap 4201893, overlap 4201889 4201893 GAGAATCATGAAATA GAGCCGTACCT CAAC AGGCACGGCTT ATTATTCTGGGAGGA TERM 4575 4201914 - 4201893 - T 95 -12.3 -3.32233 | opp_overlap 4201893, overlap 4201891 4201889 GAATCATGAAATAGA GCCGTACCT CAAC AGGCACGGC TTATTATTCTGGGAG TERM 4576 4201893 - 4201914 + T 86 -10.1 -4.02817 | opp_overlap 4201893 4201891 4201889 GAATCATGAAATAGA GCCGTACCT CAAC AGGCACGGC TTATTATTCTGGGAG YPDSF_3657 4202552 - 4201944 - | LexA repressor YPDSF_3658 4203048 - 4202677 - | diacylglycerol kinase TERM 4577 4202897 - 4202880 - G 70 -3.3 -4.84642 | TGCAAATTAATAAAA TGCGCGC TATG GCACCCA CATCCAACCAGAAGG TERM 4578 4203134 - 4203124 - H 71 -6.8 -4.18401 | opp_overlap 4203124 CCACAGATCTCAAAA CCAG TTT CTGG TATCCTTGCGACGAA TERM 4579 4203255 - 4203240 - g 76 -6.8 -4.57341 | AATTGTTGGTAAAAA GCAAGG TTAT CCCTGC AGATCCGGTCTCTGA TERM 4580 4203653 - 4203669 + G 70 -3 -4.83169 | gap 1, overlap 4203652 GTATTGTGGTTGGGG CGCGACA GTTT TGT-GCG TTTTTCTACCACCGT YPDSF_3659 4203176 - 4205653 + | glycerol-3-phosphate acyltransferase TERM 4581 4205700 - 4205680 - T 93 -12.5 -3.0644 | opp_overlap 4205681, overlap 4205671 ACTCAATGCTTAACA GCCCCCTGC CTA GCAGGGGGT TTTCTGAATACCATA TERM 4582 4205681 - 4205699 + T 100 -16 -4.42653 | opp_overlap 4205671 4205680 CTCAATGCTTAACAG CCCCCTGC CTA GCAGGGGG TTTTCTGAATACCAT TERM 4583 4205742 - 4205720 - T 95 -11.3 -3.89291 | opp_overlap 4205720, overlap 4205711 TGAATACCATAACAA TGGCCGGAC TCATT ATCCGGCCA TTTTTTACCATTACC TERM 4584 4205720 - 4205742 + T 100 -10.6 -5.09426 | opp_overlap 4205711 4205720 TGAATACCATAACAA TGGCCGGA CTCATTA TCCGGCCA TTTTTTACCATTACC ubiA 4206700 - 4205834 - | 4-hydroxybenzoate octaprenyltransferase ubiC 4207390 - 4206866 - | chorismate pyruvate lyase TERM 4585 4207458 - 4207446 - H 72 -7.7 -3.87925 | AATTAGTAAACAGAA CGCTA TTG TAGCG CAGAATAGGTACCCG TERM 4586 4207972 - 4207960 - H 70 -2.7 -5.01823 | ACAATAACAAGAAAA TTCCT ACA AAGAA TTAGCCGGGTCTTAT TERM 4587 4208470 - 4208434 - g 76 -8 -4.21933 | overlap 4208436 CGAAGGTGAAAATAA CACCGCGATATCCCTG TTCGG CACGGATATCGCCGTT GAGACCCGGCCAGGT TERM 4588 4208468 - 4208436 - g 80 -10.6 -3.70108 | overlap 4208434 AAGGTGAAAATAACA CCGCGATATCCCTG TTCGG CACGGATATCGCCG TTGAGACCCGGCCAG YPDSF_3662 4208222 - 4210777 + | hypothetical protein TERM 4589 4210806 - 4210786 - g 70 -11.1 -2.50816 | overlap 4210785 CGGTTAGTGATCAAC GGCGATGCC ACC GGCACCACC TCGGTCCGGGTGAAC YPDSF_3663 4210777 - 4212030 + | Outer membrane autotransporter barrel TERM 4590 4212258 - 4212284 + T 72 -10.1 -2.88849 | gap 1, opp_overlap 4212247, overlap 4212253 4212259 ACATCCATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCTCTGCC TERM 4591 4212259 - 4212285 + T 84 -10.1 -3.82218 | gap 1, opp_overlap 4212247, overlap 4212253 4212258 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCTCTGCCT TERM 4592 4212345 - 4212366 + T 74 -10.1 -3.14878 | overlap 4212344 4212348 GGTTTGTCAGCAGTC TGAGGTGCC TCTC GGCACCTCC TGTTGGATTAACGAC TERM 4593 4212348 - 4212363 + T 75 -10.4 -2.77791 | overlap 4212345 4212344 TTGTCAGCAGTCTGA GGTGCC TCTC GGCACC TCCTGTTGGATTAAC YPDSF_3664 4214431 - 4212374 - | oxidoreductase TERM 4594 4215428 - 4215438 + r 75 -3.2 -5.1471 | overlap 4215374 TAAAATAGCAAGCCA TCTC TTT GGGA TTTATTTTTTCTCGT YPDSF_3665 4216759 - 4215440 - | hypothetical protein TERM 4595 4215609 - 4215592 - G 70 -8.3 -3.79138 | opp_overlap 4215604, overlap 4215583 4215581 AATACACGCAGCAAA CCCCCTG CTGC CCGGGGG TGAACCCCAGTAAAT TERM 4596 4216282 - 4216266 - G 71 -7.2 -4.07568 | opp_overlap 4216266 TGCCCCGGTGTAAAA CCCCGC AAGTA GCGAGG TGTATGGGTTACCGC TERM 4597 4216580 - 4216600 + g 72 -8.3 -3.88291 | opp_overlap 4216580 TGGGCAATGCGTAAA CGTAATCAG CCC CGGATTACG TTTATCCAGCTCGTC YPDSF_3666 4218206 - 4217952 - | membrane protein YPDSF_3667 4218960 - 4218217 - | putative periplasmic chaperone protein YPDSF_3668 4221410 - 4219032 - | outer membrane fimbrial usher protein TERM 4598 4221076 - 4221064 - G 70 -10.5 -3.02013 | opp_overlap 4221063 AGTTTAACAACCATA CCCGG CCA CCGGG CTTCCATATTCTCAC YPDSF_3669 4222299 - 4221661 - | hypothetical protein TERM 4599 4222972 - 4222990 + r 86 -10.2 -3.90112 | opp_overlap 4222972 TTGAGCGAAAAAAAA CCCTGCCG ATG CAGCAGGG TTTAATTGAAACGGG TERM 4600 4222990 - 4222972 - R 100 -12.4 -5.81412 | opp_overlap 4222972 TTGAGCGAAAAAAAA CCCTGCCG ATG CAGCAGGG TTTAATTGAAACGGG YPDSF_3670 4223587 - 4223012 - | tellurium resistance protein TERM 4601 4223640 - 4223616 - R 100 -12.3 -3.61268 | opp_overlap 4223607 4223618 CACTGAAGTGTTAAA TATTCAGAGCA TTT TGCCCTGAATA TATGAATACGTTAAT YPDSF_3671 4224349 - 4223771 - | tellurium resistance protein YPDSF_3672 4225450 - 4224413 - | tellurium resistance protein YPDSF_3673 4225927 - 4225472 - | tellurite resistance protein TERM 4602 4225677 - 4225687 + g 71 -6.8 -4.1552 | GCATCAAATTCATAG CTGG TAA CCAG TTTGTTAAAGAACTC TERM 4603 4225748 - 4225763 + g 83 -3.3 -5.42605 | TTCAGGCGACTGCTT GATGA ACATGA TCATC TTTTGTTTTTCTTCC YPDSF_3674 4227144 - 4225960 - | tellurite resistance protein TERM 4604 4226021 - 4226035 + g 72 -10 -3.45634 | TCCATTTCTTTGTGT CCGCTA AAA TAGCGG TTAATTCGTTCAACT TERM 4605 4226987 - 4226969 - G 71 -7.4 -4.03234 | CCCTGCCCAGACAAA CGGATGGT GCT ATCATCCG TAACCGGTTGACCAT TERM 4606 4227128 - 4227116 - G 71 -10.5 -3.12327 | overlap 4227114 GTCTGAGACGCAACA GGGGC ATT GCCCC CAGGCATCAGATTCA YPDSF_3675 4227737 - 4227144 - | tellurium resistance protein TERM 4607 4228215 - 4228200 - g 71 -6.1 -4.3467 | opp_overlap 4228192 4228200 ATCTTGACACCAAAA TGGCG TTTATC CGCCA TATCGTGAAAGCATT TERM 4608 4228449 - 4228464 + G 71 -6 -4.30576 | ATGAATTGCGTGAAT GGCTGG CTAA CCCGCC TTTTGATACTGAAAA YPDSF_3676 4228013 - 4229074 + | hypothetical protein TERM 4609 4229491 - 4229475 - g 76 -4.3 -4.94058 | CGAATTCAAAGAAAA CCATAGC CAT GCAACGG ATCACCTGCTCTATT YPDSF_3677 4229086 - 4230222 + | hypothetical protein TERM 4610 4230740 - 4230751 + G 70 -4.4 -4.66938 | CTGGAATCCCTCTTT TCCA CTGA TGGA TTTTATATTCACCGT YPDSF_3678 4230215 - 4231027 + | hypothetical protein TERM 4611 4231312 - 4231331 + G 73 -12.2 -2.57944 | overlap 4231311 TCGTGCTCGCCAGCT TGGTACGC GCGG GCGTACCA CTTGGTGTGATGCTC YPDSF_3679 4231020 - 4232099 + | hypothetical protein YPDSF_3680 4232099 - 4233058 + | ATP/GTP-binding protein YPDSF_3681 4233455 - 4233943 + | hypothetical protein TERM 4612 4234828 - 4234841 + G 74 -2.3 -5.09521 | opp_overlap 4234829, overlap 4234829 TTTACGCCATCCATA ATGCC ACTT GGCAA TTTTTCATTTATTGA YPDSF_3682 4234495 - 4235058 + | methylenetetrahydrofolate reductase TERM 4613 4235170 - 4235189 + F 70 -3.5 -4.78981 | opp_overlap 4235152, overlap 4235154 4235171 CCTCACTCTGATGGG TGGGGCT ATATCA ACCCCCA TTTCTTTTGCTTGAT YPDSF_3683 4235399 - 4236712 + | coproporphyrinogen III oxidase TERM 4614 4237081 - 4237071 - g 71 -5.4 -4.52047 | overlap 4237073 TATCAGAGCACAAAA TTGC CAG GCAA TCGCCCTGCTGGAAC YPDSF_3684 4236709 - 4237272 + | hypothetical protein YPDSF_3685 4237306 - 4237956 + | hypothetical protein YPDSF_3686 4238042 - 4238233 + | hemin uptake protein hemp YPDSF_3687 4238363 - 4240393 + | hemin receptor precursor TERM 4615 4240426 - 4240454 + F 82 -10.3 -3.60419 | opp_overlap 4240422 GTCTGAAATCATTCA TCCGGTAATCCAT TTT GTGGCTTGCCGGA TTATCATTTGACAAT YPDSF_3688 4240512 - 4241549 + | hemin transport protein TERM 4616 4241717 - 4241750 + G 78 -13.2 -2.68823 | opp_overlap 4241717 4241719, overlap 4241720 4241722 GACAGCACCAGTCAA CAGCCTCAGGCAGC GCAAAA GCTGCCTGATGTTG GTTATATGCGCACGC TERM 4617 4241750 - 4241717 - g 74 -11 -3.11192 | opp_overlap 4241717 4241720 4241722, overlap 4241719 GACAGCACCAGTCAA CAGCCTCAGGCAGC GCAAAA GCTGCCTGATGTTG GTTATATGCGCACGC TERM 4618 4241720 - 4241747 + G 77 -11.3 -3.49618 | opp_overlap 4241719 4241717, overlap 4241717 4241722 AGCACCAGTCAACAG CCTCAGGCAGC GCAAAA GCTGCCTGATG TTGGTTATATGCGCA TERM 4619 4241722 - 4241745 + G 81 -12.5 -3.32023 | opp_overlap 4241719 4241717, overlap 4241720 4241717 CACCAGTCAACAGCC TCAGGCAGC GCAAAA GCTGCCTGA TGTTGGTTATATGCG YPDSF_3689 4241546 - 4242385 + | hemin-binding periplasmic protein YPDSF_3690 4242382 - 4243386 + | hemin transport system permease protein HmuU TERM 4620 4243787 - 4243799 + G 83 -9.1 -4.4009 | CTGGCACTGGCACAG CGCGA CTA TCGCG TTTTATCCGGTGGCG YPDSF_3691 4243379 - 4244179 + | hemin importer ATP-binding subunit TERM 4621 4244219 - 4244207 - T 77 -4.7 -5.0538 | CGCTATGCTAAAAAA CAGCC TAT GGCGG TTCCAAAGCACCAAC YPDSF_3692 4245501 - 4244320 - | cystathionine beta-lyase YPDSF_3693 4246833 - 4245547 - | transmembrane transport protein TERM 4622 4247209 - 4247238 + G 74 -10.1 -3.63839 | gap 1, opp_overlap 4247179 4247208 4247206 4247205 4247209 ATTAAAAAGAACCAC TCG-CAGCATCGTT TTA ACCGATGCTGGCGA TTACTTGTTTCATCA YPDSF_3694 4247003 - 4247986 + | LysR family transcriptional regulator YPDSF_3695 4248333 - 4248064 - | hypothetical protein YPDSF_3696 4249544 - 4248330 - | putative inner membrane protein TERM 4623 4248974 - 4249007 + g 70 -2.3 -5.05228 | overlap 4248975 GGCGTGCCGCTCTGG CTGGGTGCTGCGTCA GTGG TGAGGCGGCAGTCAC TTTTTGTAGTTTAAT TERM 4624 4249638 - 4249616 - R 72 -7.8 -3.77489 | opp_overlap 4249619, overlap 4249617 4249619 AAGGTAACAGGGAAA GTAGGCTTAT ATA ATAAGCCTAT TGAGGTTATTGACAA TERM 4625 4249637 - 4249617 - R 81 -11.3 -2.8577 | opp_overlap 4249619, overlap 4249616 4249619 AGGTAACAGGGAAAG TAGGCTTAT ATA ATAAGCCTA TTGAGGTTATTGACA TERM 4626 4249619 - 4249635 + r 72 -9.5 -3.12749 | opp_overlap 4249619 4249617 4249616 GTAACAGGGAAAGTA GGCTTAT ATA ATAAGCC TATTGAGGTTATTGA TERM 4627 4249635 - 4249619 - R 71 -9.5 -2.974 | opp_overlap 4249619, overlap 4249617 4249616 GTAACAGGGAAAGTA GGCTTAT ATA ATAAGCC TATTGAGGTTATTGA TERM 4628 4249716 - 4249742 + r 72 -10.1 -2.88849 | gap 1, opp_overlap 4249705, overlap 4249711 4249717 ACATCCATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCTCTGCC TERM 4629 4249717 - 4249743 + r 84 -10.1 -3.82218 | gap 1, opp_overlap 4249705, overlap 4249711 4249716 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCTCTGCCT TERM 4630 4249806 - 4249822 + r 76 -9.5 -3.40878 | overlap 4249804 TTGTCAGCAGTCTGA GGCTTAT ATA ATAAGCC TATTATTCACATAAT YPDSF_3697 4250994 - 4249927 - | secretion system apparatus protein SsaU YPDSF_3698 4251778 - 4250984 - | type III secretion apparatus protein TERM 4631 4251117 - 4251106 - G 91 -7.2 -5.1244 | opp_overlap 4251106 TCAGTAAGAGAAAAA GCGC CAGT GCGC TTTTAATGGGCATCG TERM 4632 4251106 - 4251117 + g 74 -7.2 -4.26076 | opp_overlap 4251106 TCAGTAAGAGAAAAA GCGC CAGT GCGC TTTTAATGGGCATCG YPDSF_3699 4252073 - 4251780 - | type III secretion apparatus protein YPDSF_3700 4252780 - 4252070 - | type III secretion system protein YPDSF_3701 4253809 - 4252847 - | type III secretion system protein YPDSF_3702 4254185 - 4253787 - | hypothetical protein TERM 4633 4253853 - 4253865 + g 86 -9.1 -4.54449 | TAACTGATGCAGTTG CCGCT GCC AGCGG TTTTGTATGCGCTGT YPDSF_3703 4254567 - 4254166 - | type III secretion system apparatus protein YPDSF_3704 4255910 - 4254564 - | type III secretion system ATPase YPDSF_3705 4257903 - 4255888 - | secretion system apparatus protein SsaV TERM 4634 4257003 - 4256984 - G 83 -3.4 -5.42514 | overlap 4256985 4256986 CGATAAAGTAAAAAA GCCGGAGC CGCA ACCGCGGC CGCCAAAGTGATAAA YPDSF_3706 4258576 - 4257929 - | type III secretion system apparatus protein YPDSF_3707 4259169 - 4258573 - | hypothetical protein YPDSF_3708 4260072 - 4259341 - | type III secretion system apparatus lipoprotein YPDSF_3709 4260320 - 4260069 - | type III secretion apparatus YPDSF_3710 4260666 - 4260418 - | type III secretion apparatus YPDSF_3711 4261595 - 4260888 - | AraC family transcription regulator TERM 4635 4261110 - 4261092 - G 71 -6 -4.386 | overlap 4261094 GAATTTCTCATAAAA CAGGAAAT TCA ATTTCCGG GTCGAAATACCCAAT YPDSF_3712 4261923 - 4261702 - | type III secretion apparatus YPDSF_3713 4263156 - 4261942 - | type-III secretion protein YPDSF_3714 4264675 - 4263158 - | type III secretion protein YPDSF_3715 4264901 - 4267720 + | two-component sensor/regulator YPDSF_3716 4267733 - 4268365 + | two-component response regulator TERM 4636 4268462 - 4268434 - T 100 -17.5 -5.38054 | opp_overlap 4268426 GGCGACAAATAAAAA CTCCCCGTCAGTA TGA TGCTGACGGGGAG TGGGTAGATACTATT gltP 4269859 - 4268543 - | glutamate/aspartate:proton symporter TERM 4637 4270450 - 4270434 - H 76 -6.7 -4.43909 | opp_overlap 4270434, overlap 4270431 ATGGTAATAAAACAA CATTTAT TTA ATAAATG TAAATTACTTTAGTC YPDSF_3718 4270714 - 4272672 + | acetyl-CoA synthetase TERM 4638 4272698 - 4272674 - f 76 -9.4 -3.5525 | gap 1, opp_overlap 4272674 4272675, overlap 4272675 AGACACCGTCGTAAA TTGTGCCGCCT ATAT AGGCGGCA-AA CTTAATTGATGCCTC TERM 4639 4272698 - 4272675 - f 76 -11 -2.72829 | opp_overlap 4272674 4272675, overlap 4272674 GACACCGTCGTAAAT TGTGCCGCCT ATAT AGGCGGCAAA CTTAATTGATGCCTC TERM 4640 4272675 - 4272698 + F 76 -11 -2.64199 | opp_overlap 4272674 4272675, overlap 4272674 GACACCGTCGTAAAT TGTGCCGCCT ATAT AGGCGGCAAA CTTAATTGATGCCTC YPDSF_3719 4272729 - 4273040 + | hypothetical protein actP 4273037 - 4274692 + | acetate permease TERM 4641 4274725 - 4274712 - T 85 -9.5 -4.1721 | opp_overlap 4274712 ATTTACAGGTTAAAA GGCCC CTAG GGGCC TAGATTGCTGACAAA YPDSF_3721 4275752 - 4274766 - | hypothetical protein TERM 4642 4275789 - 4275807 + H 100 -13.2 -4.01078 | CCAGGGGGTAATCTG CTCTCCTG ATT CAGGAGAG TTTATGGTCACTTTT YPDSF_3722 4275811 - 4276833 + | transposase TERM 4643 4276914 - 4276900 - g 77 -11.4 -3.3506 | overlap 4276891 TGGAAAGCCTTATAA GCGCAG CGC CTGCGC TGTCACAACAGGCAG YPDSF_3723 4276833 - 4277612 + | transposase/IS protein TERM 4644 4278256 - 4278237 - T 79 -7.8 -4.31859 | overlap 4278234 4278231 CGAACAAAATAATAA GGAGAGGA TGAT CCCTCCCC AATATCCGTACCAGG YPDSF_3724 4279032 - 4278277 - | transposase YPDSF_3725 4279376 - 4279110 - | helix-turn-helix, Fis-type TERM 4645 4279693 - 4279673 - H 100 -10.4 -4.84527 | opp_overlap 4279673 CGTACACAGCAAAAA CCCCACGC TTTTG GCATGGGG TTATCAGCACAACGC TERM 4646 4279673 - 4279693 + H 71 -8.9 -3.28712 | opp_overlap 4279673 CGTACACAGCAAAAA CCCCACGCT TTT GGCATGGGG TTATCAGCACAACGC TERM 4647 4279739 - 4279759 + H 71 -8.9 -3.35679 | opp_overlap 4279739 CGCACACAGCAAAAA CCCCACGCT TTG GGCATGGGG TTATCAGTACAACGC TERM 4648 4279759 - 4279739 - H 100 -10.4 -4.84527 | opp_overlap 4279739 CGCACACAGCAAAAA CCCCACGC TTTGG GCATGGGG TTATCAGTACAACGC TERM 4649 4279798 - 4279832 + H 95 -9.2 -4.50627 | opp_overlap 4279805 TGTGTTTCGCGCACA GCAAAAACCCCACGCT TTG GGCATGGGGTCTTGGC TTTATTTGATGCCTG TERM 4650 4279825 - 4279805 - H 100 -10.4 -4.8048 | opp_overlap 4279798 CGCGCACAGCAAAAA CCCCACGC TTTGG GCATGGGG TCTTGGCTTTATTTG TERM 4651 4280063 - 4280053 - H 74 -6.8 -4.27316 | opp_overlap 4280053 TCTCTCAATTCAAAA CACC TTC GGTG TTGTAAGGTTAAGCC TERM 4652 4281175 - 4281186 + H 74 -4.4 -5.06816 | CCACTTTCGTGTTTG CACA GTGC TGTG TTTTTATTAAACAGT TERM 4653 4281222 - 4281248 + H 70 -9.4 -2.75844 | opp_overlap 4281198 4281200, overlap 4281221 4281224 CCAGCTGGTATCTGC GACTGGCTTCAG CTC CAGGAGCTAGTC CTTTCACCTAACGCC TERM 4654 4281682 - 4281700 + H 82 -10.3 -3.57798 | overlap 4281675 CTTGGTCTTCCGGCG TGCGGGT TTTTC ACCCGCA TTATCGTTACTTATG TERM 4655 4283138 - 4283175 + H 78 -5.7 -4.7629 | opp_overlap 4283132 4283138 4283141, overlap 4283141 ATTGTTAAAGAGCAA TATCGTAAACACGACTT GGTA AAGTCATCTTTACGTTA TTTTTCAGTTCATAA TERM 4656 4283141 - 4283172 + H 78 -7.4 -4.47888 | opp_overlap 4283141 4283138 4283132, overlap 4283138 GTTAAAGAGCAATAT CGTAAACACGACTT GGTA AAGTCATCTTTACG TTATTTTTCAGTTCA purH 4285640 - 4287229 + | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase TERM 4657 4288299 - 4288331 + G 76 -12 -2.87003 | overlap 4288295 4288295 GGGGGTCGTTTTAGC CGCTGGCGGTTATC CAGCA GATTACCGCCAGGG TGATGTTATTCATGG YPDSF_3727 4287289 - 4288575 + | phosphoribosylamine--glycine ligase YPDSF_3728 4289395 - 4288742 - | hypothetical protein TERM 4658 4289417 - 4289404 - R 78 -5.2 -4.99043 | GCTGCATAAACAAAA GGGG TTTTAT CCCC CCCCTGCTTATTATT YPDSF_3729 4289720 - 4289445 - | transcriptional regulator HU subunit alpha YPDSF_3730 4290499 - 4289909 - | hypothetical protein YPDSF_3731 4291285 - 4290545 - | endonuclease V TERM 4659 4291057 - 4291041 - G 77 -10.9 -3.56959 | opp_overlap 4291040, overlap 4291032 ATATAAGGCAGAGAA GTTGCCA CTC TGGCAAC CTGGTATTCCACCAG hemE 4292382 - 4291315 - | uroporphyrinogen decarboxylase TERM 4660 4291510 - 4291527 + g 78 -9.9 -3.85698 | AACCGAAGGATCCAT GTTGCCT TGCA AGGCAAC TTTATCACCAACACG TERM 4661 4292204 - 4292186 - G 76 -11 -3.33492 | GCATCCAGCGGATAA CGACGCAG TGG CTGCATCG TGACCTCACAGGCTA YPDSF_3733 4293244 - 4292501 - | hypothetical protein nudC 4294161 - 4293379 - | NADH pyrophosphatase YPDSF_3735 4294246 - 4294767 + | anti-RNA polymerase sigma 70 factor TERM 4662 4294842 - 4294819 - f 86 -8.9 -4.37886 | opp_overlap 4294827 4294832, overlap 4294832 GTAGCGTGCACAAAA TGAGCAAGC AGAATA GCCTGCTCA TAAGTAGGCTATTGT TERM 4663 4294832 - 4294853 + F 78 -9.5 -3.72152 | opp_overlap 4294819 4294832, overlap 4294827 AATGAGCAAGCAGAA TAGCCTGCT CATA AGTAGGCTA TTGTAGTTTTAATTC YPDSF_3736 4295143 - 4297188 + | thiamine biosynthesis protein ThiC TERM 4664 4297620 - 4297642 + G 71 -11.2 -2.71731 | opp_overlap 4297615 4297618 4297617 AGACCAAACAGATGC CGTCATCCCC ACA GGGGTTGGCG TCGTTAAGCCGTCAG YPDSF_3737 4297175 - 4297849 + | thiamine-phosphate pyrophosphorylase TERM 4665 4298335 - 4298322 - g 74 -4.5 -4.85599 | overlap 4298330 GTCACGGCACAAAAA CCACT AATC AGCGG CAGTGCTGTGGGGTT YPDSF_3738 4297839 - 4298636 + | thiamine biosynthesis protein ThiF YPDSF_3739 4298633 - 4298848 + | sulfur carrier protein ThiS TERM 4666 4300814 - 4300801 - T 70 -3.7 -4.74706 | opp_overlap 4300802, overlap 4300802 CGTAATATTGAAAAA CCGCC CGAA GGCGT AATATCAGTGAGTTA TERM 4667 4301020 - 4301003 - T 100 -9.8 -6.32017 | opp_overlap 4301003 AATAAACAAAAAAAA CGGCCC GAGAAG GGGCCG TTCGTCTCTCAAAAA TERM 4668 4301003 - 4301020 + T 76 -9.8 -3.32022 | opp_overlap 4301003 AATAAACAAAAAAAA CGGCCC GAGAAG GGGCCG TTCGTCTCTCAAAAA TERM 4669 4301031 - 4301062 + T 84 -11.7 -3.21099 | opp_overlap 4301036, overlap 4301036 GGCCGTTCGTCTCTC AAAAACCCGCATC CCGAAA GATGCGGGTTTTG TTGGTAGTAGGCAAA TERM 4670 4301036 - 4301057 + T 100 -11.6 -4.73613 | opp_overlap 4301036, overlap 4301031 TTCGTCTCTCAAAAA CCCGCATC CCGAAA GATGCGGG TTTTGTTGGTAGTAG TERM 4671 4301057 - 4301036 - T 100 -12.3 -4.56597 | opp_overlap 4301036 4301031 TTCGTCTCTCAAAAA CCCGCATCC CGAA AGATGCGGG TTTTGTTGGTAGTAG YPDSF_3744 4305338 - 4301082 - | DNA-directed RNA polymerase subunit beta' TERM 4672 4303490 - 4303505 + g 70 -2.6 -5.00616 | gap 1 GGTAACACGTGTTCA GC-ATCT TAG AGATAGC TTTTTTACCCAGCGG rpoB 4309459 - 4305431 - | DNA-directed RNA polymerase subunit beta TERM 4673 4305529 - 4305539 + g 79 -5.4 -4.91459 | overlap 4305536 CCATACGGTGATCGC CATC CAC GATG TTTTTGTACATCTTG TERM 4674 4306417 - 4306433 + g 91 -10.9 -4.56314 | CGTCGTACTGCTCTG CCAACTG TTC CAGTTGG TTTTGCTTGTCTTCG TERM 4675 4308805 - 4308791 - G 72 -8.6 -3.9122 | opp_overlap 4308779 CACTTTCTCAAAGAA CAGATC CAA GATCTG TGCAGTGGTGAAATT TERM 4676 4309762 - 4309737 - R 100 -14.1 -4.64766 | CCTACAGCGCAAAAA GGCTGATGACT AAAA AGTCACCAGCC ATCAGCCTATAAAGT rplL 4310170 - 4309802 - | 50S ribosomal protein L7/L12 rplJ 4310734 - 4310237 - | 50S ribosomal protein L10 TERM 4677 4310774 - 4310756 - R 95 -13.2 -3.14132 | TTGCTCCTGGATTAA CCGGAGAA TAA TTCTCCGG AACTCACGTCACCCA TERM 4678 4310812 - 4310791 - R 71 -9.5 -3.06915 | ACTCACGTCACCCAA TTCACGACA AAAT TGCCGTGAA CGAGCGTTGAAACAC TERM 4679 4310856 - 4310891 + r 73 -3.5 -4.94962 | opp_overlap 4310886, overlap 4310886 CAGCAAAGACTATTC TTTATCATTCTTTAT AAACAA ATAAAGAAAGAAAAA TTTTCTTTAGGTTCT TERM 4680 4310896 - 4310886 - R 71 -4 -4.88895 | opp_overlap 4310856 4310886 AAACAAATAAAGAAA GAAA AAT TTTC TTTAGGTTCTGTCAC TERM 4681 4311076 - 4311035 - R 93 -12.6 -3.16553 | gap 1, overlap 4311033 4311037 4311040 4311062 ACAACGATCAACAGA TAGCATGGGCGTAAGATTT TAGAC AAACCTTACGCCCACG-TA AAGCGATAAAAGCAA TERM 4682 4311075 - 4311037 - R 100 -13.3 -3.13565 | overlap 4311035 4311033 4311040 4311062 AACGATCAACAGATA GCATGGGCGTAAGATTT TAGAC AAACCTTACGCCCACGT AAAGCGATAAAAGCA TERM 4683 4311072 - 4311040 - R 100 -15.8 -2.76689 | overlap 4311037 4311035 4311033 4311062 GATCAACAGATAGCA TGGGCGTAAGATTT TAGAC AAACCTTACGCCCA CGTAAAGCGATAAAA rplA 4311803 - 4311099 - | 50S ribosomal protein L1 rplK 4312235 - 4311807 - | 50S ribosomal protein L11 TERM 4684 4312385 - 4312357 - R 100 -16.2 -5.2853 | CATCTAAAAACAAAA GGCGCGAAATTA TATTT TAATTTCGCGCC TAAGACAAGACTCAA nusG 4312971 - 4312426 - | transcription antitermination protein NusG TERM 4685 4313040 - 4312997 - R 74 -6.8 -4.25056 | gap 1, overlap 4313006 CAGGCCAGTAATAAA TGATACCAAGCGGACTAGGAT ACC ATCC-AGTCCCCATAGAATCA GTGACATTACAGCAG secE 4313356 - 4312973 - | preprotein translocase subunit SecE TERM 4686 4313415 - 4313391 - R 79 -7.9 -4.28115 | overlap 4313384 4313392 ATTCAGAACAAACAA CTTTGCTTCGC ATC GCAAAGCAAAC CAAGCCGAAGGATGC TERM 4687 4313414 - 4313392 - R 84 -11.4 -3.15784 | overlap 4313384 4313391 TTCAGAACAAACAAC TTTGCTTCGC ATC GCAAAGCAAA CCAAGCCGAAGGATG TERM 4688 4313582 - 4313565 - R 100 -11.3 -4.91712 | opp_overlap 4313565 TGCAACGTATAAAAA GGGCATC AAAT GATGCCC TTTTATCGCATGTCG TERM 4689 4313565 - 4313582 + r 100 -11.3 -4.41548 | opp_overlap 4313565 TGCAACGTATAAAAA GGGCATC AAAT GATGCCC TTTTATCGCATGTCG YPDSF_3752 4314791 - 4313607 - | elongation factor Tu YPDSF_3753 4316033 - 4315848 - | IS100 transposase YPDSF_3754 4316628 - 4316116 - | IS100 transposase TERM 4690 4316547 - 4316561 + g 77 -11.4 -3.3506 | overlap 4316560 CTGCCTGTTGTGACA GCGCAG GCG CTGCGC TTATAAGGCTTTCCA YPDSF_3755 4317650 - 4316628 - | transposase for insertion sequence IS100 TERM 4691 4317672 - 4317654 - R 100 -13.2 -4.01078 | AAAAGTGACCATAAA CTCTCCTG AAT CAGGAGAG CAGATTACCCCCTGG TERM 4692 4318159 - 4318134 - R 100 -10.3 -4.46656 | overlap 4318135 4318136 GGCAGAAGAGTAAAA TGCCCGCGCCA GAGA TGGCGCGGGTC GAGCTCCCAAGGAAG TERM 4693 4318158 - 4318135 - R 100 -13.8 -3.27271 | overlap 4318134 4318136 GCAGAAGAGTAAAAT GCCCGCGCCA GAGA TGGCGCGGGT CGAGCTCCCAAGGAA TERM 4694 4318157 - 4318136 - R 100 -17.3 -2.5564 | overlap 4318135 4318134 CAGAAGAGTAAAATG CCCGCGCCA GAGA TGGCGCGGG TCGAGCTCCCAAGGA TERM 4695 4318240 - 4318251 + r 82 -5.8 -5.00616 | overlap 4318236 GTCGCGAGCACGTTG CCAG CAGC CTGG TTTTTTGCAGGCAAA YPDSF_3756 4319730 - 4318267 - | hypothetical protein TERM 4696 4319520 - 4319537 + g 70 -2.1 -5.00895 | gap 1, overlap 4319520 4319521 TAATTCGGACTTCAT C-GAAAAT ATT ATTTTCAG TTTTTATGTAATCCG TERM 4697 4319649 - 4319669 + g 73 -9.1 -3.72324 | opp_overlap 4319648 GTGTATCGTAGATAC GTATTGCCA GTA TGGTAATAC TTATTACTACCAATA YPDSF_3757 4319942 - 4320142 + | hypothetical protein TERM 4698 4320186 - 4320149 - T 82 -4.9 -5.41143 | gap 1, overlap 4320153 4320154 CATGCTTGAAAAAAA TAAATCGGGCCGCTGATA CCC CATCAACCGCCCG-TTAA CATTTGTTCCCTTAC TERM 4699 4320183 - 4320153 - T 100 -8.2 -5.20328 | overlap 4320149 4320154 CTTGAAAAAAATAAA TCGGGCCGCTGATA CCC CATCAACCGCCCGT TAACATTTGTTCCCT TERM 4700 4320182 - 4320154 - T 90 -11.7 -3.7057 | overlap 4320153 4320149 TTGAAAAAAATAAAT CGGGCCGCTGATA CCC CATCAACCGCCCG TTAACATTTGTTCCC YPDSF_3758 4321601 - 4320198 - | amino acid permease YPDSF_3759 4323551 - 4322019 - | histidine ammonia-lyase YPDSF_3760 4325239 - 4323548 - | urocanate hydratase TERM 4701 4324551 - 4324534 - G 71 -6.9 -4.20769 | opp_overlap 4324534 4324532 ACAGTGCAATAGAAA CCGCGAC ACCT GTAGCGG TATATTTCTCGATGC YPDSF_3761 4325966 - 4326910 + | pyridoxal-phosphate dependent protein TERM 4702 4327441 - 4327424 - g 71 -7.1 -4.20696 | opp_overlap 4327426 GCATTAACGTTAAAA CACTAAT GAAA ATTAGTG TTAAACCTCATGGGG YPDSF_3762 4326907 - 4327473 + | adenine phosphoribosyltransferase TERM 4703 4328471 - 4328454 - g 73 -2.7 -4.99043 | overlap 4328457 TCGGCATAAACAAAA TTATTGG GAAC CCAAAAA CAAAAGGGGCATAAC YPDSF_3763 4327556 - 4328485 + | hypothetical protein TERM 4704 4328988 - 4328998 + G 91 -6.8 -5.17054 | opp_overlap 4328978 CAAGATAAGCAGAGT GCGT ATC ACGC TTTTTTGGCTATTCT TERM 4705 4329283 - 4329272 - g 76 -5.8 -4.72272 | opp_overlap 4329276, overlap 4329273 TCTGGGGATCAAAAA TGGC CCTA GCCA TGCGGAGGTGATGAT YPDSF_3764 4328487 - 4329731 + | hypothetical protein YPDSF_3765 4330254 - 4331207 + | iron transport protein YPDSF_3766 4331217 - 4332176 + | iron transport permease TERM 4706 4332260 - 4332280 + G 83 -9.7 -4.25256 | overlap 4332257 TATTGCTACTGAGCA TCATCGCTC TCG GTGCGATGA TTATTTTCATGACAA YPDSF_3767 4332166 - 4333173 + | iron transport permease YPDSF_3768 4333170 - 4333928 + | iron ABC transporter, ATP-binding protein YPDSF_3770 4334846 - 4334661 - | hypothetical protein YPDSF_3771 4335778 - 4336140 + | regulator TERM 4707 4336592 - 4336579 - g 76 -5.2 -4.76041 | overlap 4336581 CATAGTCAGGAAAAA CGCC GCGTCT GGCG AAAACGGCACCTTGC YPDSF_3772 4336333 - 4336818 + | transposase YPDSF_3773 4336818 - 4337111 + | hypothetical protein TERM 4708 4337591 - 4337609 + T 76 -6.7 -4.55287 | overlap 4337590 GGCTCTCACCACTTC GCCCTTG CCGTT TAAGGGC TTTTCTCTGGCTAGC YPDSF_3774 4339270 - 4337798 - | hypothetical protein YPDSF_3775 4340357 - 4339164 - | phage integrase YPDSF_3776 4341936 - 4340743 - | AraC family transcription regulator TERM 4709 4342007 - 4341988 - R 82 -5.7 -4.91459 | opp_overlap 4341988 GAACAGGCAGAAAAA TCAGCGC GGTATG GCACTGA TTTTCCTATGGGATA YPDSF_3777 4343210 - 4342026 - | sugar transport system permease protein TERM 4710 4342923 - 4342910 - G 72 -3.8 -4.84527 | overlap 4342911 GCCAGACATCAAAAA TGGC CGCTAT GCCA CCCAATAACCCCATC YPDSF_3778 4344729 - 4343197 - | xylose transporter ATP-binding subunit TERM 4711 4344418 - 4344401 - G 80 -10.5 -3.727 | overlap 4344390 4344395 TCCATGATACCGAAA CGGCCCC ATTC GGAGCCG AGGAACATGTTCTCC xylF 4345932 - 4344937 - | D-xylose transporter subunit XylF TERM 4712 4346074 - 4346089 + H 70 -2.6 -4.95484 | overlap 4346076 GTTTAATGTTAATTT TATGAT AACG ATCATG TTTTCTTTCCTCATA TERM 4713 4346378 - 4346368 - H 74 -6.8 -4.2717 | opp_overlap 4346356 ACCAGCCCAGCAAAA GCAG GGC CTGC TTCCAAGGAGTATTG YPDSF_3780 4346395 - 4347714 + | xylose isomerase TERM 4714 4348105 - 4348139 + G 76 -5.7 -4.59773 | gap 1, opp_overlap 4348093 4348101 AAACAACATCAGGTG CTGCGCCCCGCCATTT TATG GAATGACGGC-CGCAG TTTTTCCCAGTGCCA TERM 4715 4348821 - 4348796 - g 84 -4.6 -5.28176 | opp_overlap 4348796 CTGAGGTAGAAAAAA CCCCAATGGC TGCAAC GCCAGTGTGG TTCCTACCCTATCTT YPDSF_3781 4347838 - 4349292 + | xylulose kinase TERM 4716 4349354 - 4349384 + T 100 -9.1 -4.82901 | opp_overlap 4349353 4349351 4349354, overlap 4349355 AGTGCGAATAAACAC CGTGCTGGGTAAT TCATT ATTACTCAGCACA TTTTTATAGGGCCAC TERM 4717 4349355 - 4349383 + T 100 -12.6 -3.49419 | opp_overlap 4349354 4349353 4349351, overlap 4349354 GTGCGAATAAACACC GTGCTGGGTAAT TCATT ATTACTCAGCAC ATTTTTATAGGGCCA YPDSF_3782 4350396 - 4349410 - | hypothetical protein YPDSF_3783 4351202 - 4350435 - | fimbrial chaperone TERM 4718 4350553 - 4350531 - G 70 -11.4 -2.69717 | overlap 4350530 4350526 ATCCATATAACCAAC GTTATAACGG CTA CCGCTATAAC CCGGCGTTTTAACAA YPDSF_3784 4351930 - 4351295 - | outer membrane fimbrial usher porin TERM 4719 4351847 - 4351859 + g 73 -6.3 -4.5448 | CCAGTTGGTATTGAT TGAGT TGT ACTCA TTATTTTTATGGCTA YPDSF_3785 4353785 - 4351956 - | hypothetical protein TERM 4720 4353743 - 4353757 + g 100 -2.1 -6.34616 | TTGTTAATACTTTCA CCATT AGGAA GATGG TTTTTTTTCTTTTAG TERM 4721 4353815 - 4353848 + r 93 -11.9 -3.66497 | opp_overlap 4353816 4353819, overlap 4353807 4353816 4353819 4353824 CTTATGGCGATAATA TTAATTAGAGGGGAG TTAC CTCCCCTTTAATTAC TTTAAACATTTGTTA TERM 4722 4353816 - 4353847 + r 100 -15.4 -2.79175 | opp_overlap 4353816 4353819, overlap 4353815 4353807 4353819 4353824 TTATGGCGATAATAT TAATTAGAGGGGAG TTAC CTCCCCTTTAATTA CTTTAAACATTTGTT TERM 4723 4353847 - 4353816 - R 90 -13.2 -2.53271 | opp_overlap 4353816 4353815 4353807 4353819 4353824, overlap 4353819 TTATGGCGATAATAT TAATTAGAGGGGAG TTAC CTCCCCTTTAATTA CTTTAAACATTTGTT TERM 4724 4353819 - 4353844 + r 100 -12.7 -3.5332 | opp_overlap 4353816 4353819, overlap 4353816 4353815 4353807 4353824 TGGCGATAATATTAA TTAGAGGGGAG TTAC CTCCCCTTTAA TTACTTTAAACATTT TERM 4725 4353844 - 4353819 - R 80 -10.5 -3.41745 | opp_overlap 4353819 4353816 4353815 4353807 4353824, overlap 4353816 TGGCGATAATATTAA TTAGAGGGGAG TTAC CTCCCCTTTAA TTACTTTAAACATTT TERM 4726 4353824 - 4353839 + r 89 -10.4 -4.04394 | opp_overlap 4353819 4353816, overlap 4353819 4353816 4353815 4353807 ATAATATTAATTAGA GGGGAG TTAC CTCCCC TTTAATTACTTTAAA YPDSF_3786 4354418 - 4353861 - | fimbrial protein TERM 4727 4355094 - 4355121 + r 75 -3.4 -5.24129 | opp_overlap 4355094 TTTAACACAATCCAA GCCACTGAGA ATAAACCC TCTCGGTAGC TTTTTTATAAACCAA TERM 4728 4355165 - 4355146 - R 85 -4.4 -5.50925 | opp_overlap 4355162 AACCAAGATAAAAAA TAACTTTA GCAT TAAAGTCA GTGTCGTATATTGGC YPDSF_3787 4356287 - 4355295 - | hypothetical protein TERM 4729 4355866 - 4355876 + g 70 -8.2 -3.67976 | ATTGCCAGATAGCGG CCCG AAA CGGG TTTAACCTTAATAAG TERM 4730 4356650 - 4356594 - g 73 -10.3 -3.30159 | gap 1, opp_overlap 4356599 4356604 4356609, overlap 4356595 4356604 CCAATGGGGCCATAA GTGCACTGAACC-CCAGATCTTGGAT CTTTTT ATCCATGATCTGGAGGTTCGGTTCAA TGAAACACCCTTTTT TERM 4731 4356649 - 4356595 - g 78 -13.8 -2.57881 | gap 1, opp_overlap 4356599 4356604 4356609, overlap 4356594 4356604 CAATGGGGCCATAAG TGCACTGAACC-CCAGATCTTGGAT CTTTTT ATCCATGATCTGGAGGTTCGGTTCA ATGAAACACCCTTTT TERM 4732 4356599 - 4356645 + G 89 -15.4 -3.05384 | gap 1, opp_overlap 4356595 4356594 4356604, overlap 4356604 4356609 GGGGCCATAAGTGCA CTGAACC-CCAGATCTTGGAT CTTTTT ATCCATGATCTGGAGGTTCGG TTCAATGAAACACCC TERM 4733 4356639 - 4356604 - g 79 -12.7 -3.08471 | opp_overlap 4356599 4356604 4356609, overlap 4356595 4356594 CATAAGTGCACTGAA CCCCAGATCTTGGAT CTTTTT ATCCATGATCTGGAG GTTCGGTTCAATGAA TERM 4734 4356604 - 4356640 + G 73 -10.3 -3.19192 | gap 1, opp_overlap 4356604 4356595 4356594, overlap 4356599 4356609 CATAAGTGCACTGAA CC-CCAGATCTTGGAT CTTTTT ATCCATGATCTGGAGG TTCGGTTCAATGAAA TERM 4735 4356609 - 4356619 + G 76 -5.4 -4.88736 | opp_overlap 4356604 4356595 4356594, overlap 4356604 4356599 GTGCACTGAACCCCA GATC TTG GATC TTTTTATCCATGATC YPDSF_3788 4356491 - 4357165 + | insertion element IS1661 DNA-binding protein TERM 4736 4357985 - 4357967 - g 71 -11 -2.73735 | overlap 4357957 4357955 4357978 AAACAGGCGGAATGA GTCCGGCA GAA TACCGGAC TCAGGTAGAAAAGCA YPDSF_3789 4357219 - 4358004 + | transposase for insertion sequence IS1661 metF 4359058 - 4358174 - | 5,10-methylenetetrahydrofolate reductase metL 4361726 - 4359291 - | bifunctional aspartate kinase II/homoserine dehydrogenase II TERM 4737 4360191 - 4360173 - G 84 -10.3 -4.08767 | TTCATCGTTGTAAAA TGCCAGC GTCCG GCTGGCA TCCAAACCATCGTAA YPDSF_3792 4362889 - 4361729 - | cystathionine gamma-synthase YPDSF_3793 4363267 - 4363584 + | transcriptional repressor protein MetJ YPDSF_3794 4363556 - 4363726 + | hypothetical protein YPDSF_3795 4363921 - 4364388 + | hypothetical protein TERM 4738 4364427 - 4364462 + T 74 -4.8 -4.74801 | overlap 4364410 4364429 4364433 4364445 4364446 TCACTGCAGTTAACC TTTTCACTGCAGTTAA CCTT TTCACTGCAGTTAATA TTTTTACTGCAGTTA TERM 4739 4364429 - 4364460 + T 72 -7.4 -3.98658 | overlap 4364410 4364427 4364433 4364445 4364446 ACTGCAGTTAACCTT TTCACTGCAGTTAA CCTT TTCACTGCAGTTAA TATTTTTACTGCAGT TERM 4740 4364433 - 4364456 + T 73 -8.2 -3.62531 | overlap 4364410 4364429 4364427 4364445 4364446 CAGTTAACCTTTTCA CTGCAGTTAA CCTT TTCACTGCAG TTAATATTTTTACTG TERM 4741 4364515 - 4364543 + T 100 -7.5 -5.63517 | opp_overlap 4364515 TTTCACTACAAAAAA TGGTTCAGCATAA CAA TTGTGCTTAGCCA TTTTTTCTTTACGCA TERM 4742 4364543 - 4364515 - T 79 -3.1 -5.31275 | opp_overlap 4364515 TTTCACTACAAAAAA TGGTTCAGCATAA CAA TTGTGCTTAGCCA TTTTTTCTTTACGCA TERM 4743 4364878 - 4364892 + T 100 -12.8 -4.96848 | opp_overlap 4364878 AGTGGCAACAAAAAA GGCGCC CAA GGCGCC TTTTTATCTGACGGG TERM 4744 4364892 - 4364878 - T 100 -12.8 -5.45652 | opp_overlap 4364878 AGTGGCAACAAAAAA GGCGCC CAA GGCGCC TTTTTATCTGACGGG rpmE 4365129 - 4364914 - | 50S ribosomal protein L31 TERM 4745 4365230 - 4365197 - H 90 -11.2 -3.94409 | opp_overlap 4365203, overlap 4365200 CACACGATTGATAAA TAACCATCGTTGAT AAAATA AGCAACGATGGTTA ACAGGATTTGATATC TERM 4746 4365227 - 4365200 - H 79 -8.5 -4.09519 | opp_overlap 4365203, overlap 4365197 ACGATTGATAAATAA CCATCGTTGAT AAAATA AGCAACGATGG TTAACAGGATTTGAT YPDSF_3797 4365382 - 4367580 + | primosome assembly protein PriA TERM 4747 4367664 - 4367711 + F 78 -5.6 -4.85918 | TGATTCAGGTGAGGG GATATGGCGAACCCCTTG CAGCGTCAAGAA AAAGGGGTTCGCCCGATC TTTTATTGTCTGATC YPDSF_3798 4367957 - 4368961 + | DNA-binding transcriptional regulator CytR YPDSF_3799 4369027 - 4369872 + | cell division protein FtsN YPDSF_3800 4369972 - 4370496 + | ATP-dependent protease peptidase subunit hslU 4370567 - 4371898 + | ATP-dependent protease ATP-binding subunit TERM 4748 4371946 - 4371976 + F 100 -15.4 -4.9934 | overlap 4371949 TCCAGTATGGAGTAT CCCGAGTGGGAGGC ATC GCCTCCCACTCTTG TTTTTATCGTATTAT TERM 4749 4371949 - 4371973 + F 100 -20.1 -4.57057 | overlap 4371946 AGTATGGAGTATCCC GAGTGGGAGGC ATC GCCTCCCACTC TTGTTTTTATCGTAT TERM 4750 4372005 - 4372027 + F 70 -2.8 -5.06451 | ATGATTCTTATCGCA TTATGATTTT GAT AACGTCATAA TTTTTTGACATGATA TERM 4751 4372176 - 4372153 - g 83 -13.2 -3.27029 | overlap 4372151 4372162 4372166 GCCTATCAATCAACA CCAGCCAAAC CCAG GCTTGGCTGG AAAGCCTACGACCAC YPDSF_3802 4372122 - 4373051 + | 1,4-dihydroxy-2-naphthoate octaprenyltransferase YPDSF_3803 4373193 - 4373678 + | ribonuclease activity regulator protein RraA YPDSF_3804 4374379 - 4373795 - | hypothetical protein YPDSF_3805 4374834 - 4374685 - | hypothetical protein TERM 4752 4375000 - 4374975 - R 100 -14.1 -3.33815 | opp_overlap 4374975 ATCCCTTTCAATTAA TATGCCAGCGC TTTC ACGCTGGCATA TTTACTTATTACTGC TERM 4753 4374975 - 4375000 + r 100 -13.4 -4.09805 | opp_overlap 4374975 ATCCCTTTCAATTAA TATGCCAGCG CTTTCA CGCTGGCATA TTTACTTATTACTGC YPDSF_3806 4375248 - 4375009 - | hypothetical protein YPDSF_3807 4375461 - 4376753 + | hypothetical protein YPDSF_3808 4376746 - 4378860 + | hypothetical protein YPDSF_3809 4379054 - 4378869 - | hypothetical protein TERM 4754 4379056 - 4379085 + H 100 -13.7 -3.28712 | opp_overlap 4379061, overlap 4379061 ATCGGCGCACCCACA GAAAAGGGCGATA CTGA TATCGCCCTTTAC TTGTGCCCAGAAAAC TERM 4755 4379080 - 4379061 - H 100 -12.2 -4.55287 | opp_overlap 4379056 4379061 CGCACCCACAGAAAA GGGCGATA CTGA TATCGCCC TTTACTTGTGCCCAG TERM 4756 4379061 - 4379080 + H 100 -12.2 -3.9941 | opp_overlap 4379061, overlap 4379056 CGCACCCACAGAAAA GGGCGATA CTGA TATCGCCC TTTACTTGTGCCCAG TERM 4757 4379100 - 4379118 + H 100 -16 -3.07307 | opp_overlap 4379100 CTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC TERM 4758 4379118 - 4379100 - H 100 -16 -4.36914 | opp_overlap 4379100 CTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC YPDSF_3810 4379231 - 4379689 + | transposase for the IS1541 insertion element TERM 4759 4379763 - 4379795 + T 100 -11.3 -4.44046 | opp_overlap 4379770, overlap 4379767 4379769 4379770 CCTTATAGGCGCATA TGAAAAACCTCCGGC TAT GCCGGAGGATATTTA TTTATTTCCGCTGAC TERM 4760 4379767 - 4379791 + T 100 -9.9 -4.78326 | opp_overlap 4379770, overlap 4379763 4379769 4379770 ATAGGCGCATATGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTTATTTCCGC TERM 4761 4379769 - 4379789 + T 100 -12.5 -3.99693 | opp_overlap 4379770, overlap 4379767 4379763 4379770 AGGCGCATATGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTTATTTCC TERM 4762 4379788 - 4379770 - T 100 -16 -4.8048 | opp_overlap 4379769 4379767 4379763 4379770 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTATTTC TERM 4763 4379770 - 4379788 + T 100 -16 -2.98189 | opp_overlap 4379770, overlap 4379769 4379767 4379763 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTATTTC YPDSF_3811 4380136 - 4379897 - | hypothetical protein YPDSF_3812 4380796 - 4381644 + | glycerol uptake facilitator protein TERM 4764 4382637 - 4382627 - g 79 -5.4 -5.0538 | GGGCATGGCAAAAAA TACC TAC GGTA CGGGTTGCTTCCTGC TERM 4765 4383314 - 4383303 - g 74 -3.6 -5.01732 | AAGGGCTGGAAAAAA GCAG TGGC CCGC GCCCGGGATTGGGAA YPDSF_3813 4381821 - 4383344 + | hypothetical protein TERM 4766 4383419 - 4383441 + F 100 -11.3 -4.93365 | opp_overlap 4383414 4383419 TTAAACCAAACACAA CGCGCTATC CCCCC GATGGCGCG TTTTTCGTTGTGAGA TERM 4767 4383441 - 4383419 - f 80 -9.1 -3.93578 | opp_overlap 4383419, overlap 4383414 TTAAACCAAACACAA CGCGCTATC CCCCC GATGGCGCG TTTTTCGTTGTGAGA TERM 4768 4384329 - 4384315 - g 73 -9.2 -3.70446 | overlap 4384316 CGACAGTGAAGATAA CCGCCG CAT CGGCGA ACAAGAGTTATTACG glpX 4383581 - 4384591 + | fructose 1,6-bisphosphatase II TERM 4769 4384615 - 4384644 + F 70 -7.8 -3.68619 | GCAATCATTTTTATT CTGCACGGCGCT CGTAAA AGCGCCGTAAAG TTTACATCAGTTAGA YPDSF_3815 4384746 - 4385492 + | ferredoxin-NADP reductase YPDSF_3816 4386294 - 4385833 - | hypothetical protein YPDSF_3817 4386415 - 4387050 + | hypothetical protein TERM 4770 4387121 - 4387135 + F 73 -10 -3.03309 | opp_overlap 4387121, overlap 4387103 TGTTGGACAGGTAAA CTGCCT GTC AGGCAG TCATTATTATTGACC TERM 4771 4387135 - 4387121 - f 80 -10 -3.70902 | opp_overlap 4387103 4387121 TGTTGGACAGGTAAA CTGCCT GTC AGGCAG TCATTATTATTGACC tpiA 4387179 - 4387946 + | triosephosphate isomerase TERM 4772 4388005 - 4387984 - T 85 -5.8 -5.1523 | opp_overlap 4387978 4387984, overlap 4387978 4387976 GGTACAACACAAAAA CCGGCG TAAATAAAAG CGCCGG TTTTTATATATCCAA TERM 4773 4387984 - 4388005 + T 84 -6.5 -5.03994 | opp_overlap 4387984 4387978 4387976, overlap 4387978 GGTACAACACAAAAA CCGGCGT AAATAAAA GCGCCGG TTTTTATATATCCAA YPDSF_3819 4389413 - 4388178 - | transcriptional regulator YPDSF_3820 4389550 - 4390287 + | hypothetical protein TERM 4774 4390564 - 4390574 + G 91 -6.8 -5.15634 | CGCCGACCTCCGAAT GCCA TGA TGGC TTTTTTGGTGACCTG YPDSF_3821 4390284 - 4390997 + | hypothetical protein TERM 4775 4392534 - 4392570 + F 71 -8.8 -3.39908 | gap 1, opp_overlap 4392527, overlap 4392533 4392530 4392535 ATTTAAACGTCGCTT AGCCACTGAAGACAAGG TCAT CCT-GTTTTCGGTGGCC TGTCTTTTGGCGCAA TERM 4776 4392535 - 4392569 + F 88 -12.3 -2.63623 | gap 1, opp_overlap 4392527, overlap 4392534 4392533 4392530 TTTAAACGTCGCTTA GCCACTGAAGACAAGG TCAT CCT-GTTTTCGGTGGC CTGTCTTTTGGCGCA YPDSF_3824 4392607 - 4393383 + | hypothetical protein TERM 4777 4393505 - 4393468 - T 77 -8.5 -3.91897 | gap 1, opp_overlap 4393477 CGCGGTAGCGATAAA CGTTCAACACCACAACAT ACA ACGATGTGGTGTTGG-CG ATAAAGCGGTTGGTA YPDSF_3825 4394622 - 4393633 - | sulfate transporter subunit TERM 4778 4394818 - 4394766 - R 100 -9.5 -5.00138 | gap 3, opp_overlap 4394766 GACCGAAAGTAAAAA GCCCTCGTAATGTAAACTG--CCCAA CTTT TTGGGATCAGTTCA-ATTTCGAGGGC TTGATGAATGAGCGA YPDSF_3826 4395826 - 4394843 - | 6-phosphofructokinase fieF 4396946 - 4396044 - | ferrous iron efflux protein F TERM 4779 4397223 - 4397245 + r 74 -7 -4.2535 | CAGAGAATTTCTGGT CTGTGGAATA CCG TATTCCGCCG TTTTCACTATGGTCT YPDSF_3828 4398467 - 4397508 - | hypothetical protein YPDSF_3829 4398688 - 4398512 - | hypothetical protein YPDSF_3830 4398784 - 4398987 + | hypothetical protein TERM 4780 4399088 - 4399070 - T 100 -14.6 -5.71638 | CAATAAGCAAAAAAA GCCCTCCA TCA TGGAGGGC GAAAGACAGGGATGG cpxP 4399633 - 4399145 - | periplasmic stress adaptor protein CpxP TERM 4781 4399489 - 4399504 + g 76 -6.8 -4.49316 | CATCAAACATGTTAT GGTGAC CGCG GTCGCC TTTCTTGTTCATCAT YPDSF_3832 4399807 - 4400505 + | DNA-binding transcriptional regulator CpxR TERM 4782 4401516 - 4401527 + G 76 -7.2 -4.35644 | overlap 4401501 4401500 GTCACGGCACCTCCG GGGC CATG GCCC TTATTTTGTAATCCT TERM 4783 4401739 - 4401726 - g 70 -9.5 -3.32498 | TATCGTACAGATGAA GCCCG AGAT CGGGC GTCGGGAGGAACAGG cpxA 4400502 - 4401878 + | two-component sensor protein YPDSF_3834 4402991 - 4401927 - | bifunctional regulatory protein/DNA repair protein TERM 4784 4402673 - 4402663 - G 80 -2.4 -5.50723 | CGATGAAAATAAAAA GTGC TAA GCCC CAGTTGAGCTGCCAA YPDSF_3835 4403180 - 4403668 + | methyltransferase cysE 4404612 - 4403791 - | serine acetyltransferase gpsA 4405897 - 4404878 - | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase TERM 4785 4405284 - 4405272 - G 74 -7.7 -4.26076 | overlap 4405273 4405276 GCATTCGCACCAAAA CCGAT GCC ATCGG ACATACCTGCACCGA YPDSF_3838 4406373 - 4405897 - | preprotein translocase subunit SecB TERM 4786 4406486 - 4406466 - R 82 -10.4 -3.68827 | CACTGACGAGTTAAA GCAGTGGG TCTAG CCCACCGC GCGCATCCAGGGCGT YPDSF_3839 4406709 - 4406461 - | glutaredoxin 3 YPDSF_3840 4407262 - 4406828 - | hypothetical protein TERM 4787 4408080 - 4408092 + G 70 -9.1 -3.6269 | opp_overlap 4408079 4408080, overlap 4408078 AGCTGGCGGCTAAAC GCGGT GCA ACCGC TATTTATCTGCATGC TERM 4788 4409042 - 4409013 - g 70 -8.6 -3.74747 | gap 1 GCAACGCTGAGCAAA TGCGTGACCCGGC AACTG GCCAGG-CACACA CCGCCCATACCAGCC YPDSF_3841 4407659 - 4409206 + | phosphoglyceromutase TERM 4789 4409263 - 4409305 + G 77 -12.1 -3.11634 | opp_overlap 4409260, overlap 4409267 AACTACGAAAGATGC CGTCTCTGACGGTAGAGAG TCCCC CTCTCTGCTGTCAGATAAG TTGAGTCGTCTACCG TERM 4790 4409267 - 4409301 + G 86 -15.9 -2.55722 | opp_overlap 4409260, overlap 4409263 ACGAAAGATGCCGTC TCTGACGGTAGAGAG TCCCC CTCTCTGCTGTCAGA TAAGTTGAGTCGTCT TERM 4791 4409506 - 4409492 - g 95 -2.1 -6.13503 | CAGCAACAAAAAAAA CAACG CAGTT CATTG CTGGATCAACTAAAA TERM 4792 4410325 - 4410347 + G 71 -6.2 -4.28548 | opp_overlap 4410318 4410329, overlap 4410328 TGAAGGCAGCGAAGT CAAAGCCATC GCC GATGGCCGTG TTTTACTGGCTGACT TERM 4793 4410343 - 4410329 - g 77 -10 -3.76952 | opp_overlap 4410328 4410325, overlap 4410318 GGCAGCGAAGTCAAA GCCATC GCC GATGGC CGTGTTTTACTGGCT YPDSF_3842 4409216 - 4410586 + | hypothetical protein YPDSF_3843 4410610 - 4411047 + | hypothetical protein YPDSF_3844 4411044 - 4411544 + | hypothetical protein TERM 4794 4411669 - 4411629 - T 86 -11.3 -3.3506 | opp_overlap 4411620, overlap 4411666 CGTAAATCCTGACAA GGGCTTGGTATCGCA GCGGGTAGTTT TGCAACACCAAGCCC GAAGGGGATAAACTA tdh 4412707 - 4411682 - | L-threonine 3-dehydrogenase YPDSF_3846 4413928 - 4412717 - | 2-amino-3-ketobutyrate coenzyme A ligase rfaD 4414174 - 4415106 + | ADP-L-glycero-D-mannoheptose-6-epimerase YPDSF_3848 4415137 - 4416201 + | ADP-heptose:LPS heptosyltransferase II YPDSF_3849 4416201 - 4417166 + | ADP-heptose:LPS heptosyl transferase I YPDSF_3850 4417478 - 4418863 + | 3-deoxy-D-manno-octulosonic-acid transferase YPDSF_3851 4418864 - 4419646 + | lipopolysaccharide core biosynthesis glycosyl transferase coaD 4419643 - 4420122 + | phosphopantetheine adenylyltransferase YPDSF_3853 4420927 - 4420091 - | formamidopyrimidine-DNA glycosylase TERM 4795 4420968 - 4420995 + r 95 -12.8 -3.16683 | opp_overlap 4420974, overlap 4420974 TGTACTTTATATAAT AAAAAACCCGGC CAAG GCCGGGTTTTTC TTAGTCCGCTAAAAT TERM 4796 4420989 - 4420974 - R 100 -11.8 -5.60689 | opp_overlap 4420968 4420974 TTATATAATAAAAAA CCCGGC CAAG GCCGGG TTTTTCTTAGTCCGC TERM 4797 4420974 - 4420989 + r 100 -11.8 -5.1356 | opp_overlap 4420974, overlap 4420968 TTATATAATAAAAAA CCCGGC CAAG GCCGGG TTTTTCTTAGTCCGC TERM 4798 4421003 - 4421024 + r 83 -8.9 -4.07877 | GGTTTTTCTTAGTCC GCTAAAATT ACTT AATTTTAGC TTCTTTATAGAGTAC rpmG 4421177 - 4421010 - | 50S ribosomal protein L33 rpmB 4421425 - 4421189 - | 50S ribosomal protein L28 radC 4422356 - 4421688 - | DNA repair protein RadC TERM 4799 4422722 - 4422733 + G 71 -7.2 -4.04209 | CGCTACAGGCAGTCT CGGG CTAT CCCG TTTCTGATGATTTGC YPDSF_3857 4422436 - 4423767 + | bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase dut 4423745 - 4424203 + | deoxyuridine 5'-triphosphate nucleotidohydrolase TERM 4800 4424272 - 4424245 - f 91 -12 -3.56562 | gap 1, opp_overlap 4424240 AAAGCTATCACATAA GCCGC-CTGGGCA TTG TTCCCAGAGCGGC CGGTGTTTGGGTTTT TERM 4801 4424588 - 4424571 - g 76 -4.8 -4.90906 | CTACAAGATGAAAAA GAGACG TTTAAT CGCCTC CGCTTAATCCTGCTG TERM 4802 4424791 - 4424756 - g 72 -4 -4.82901 | opp_overlap 4424772, overlap 4424772 4424773 CCTTCGTGAGAAAAA GCTGCGTGATGGACAA GGCT TTATCCATGATGAAGC GTTACTGGCCACCCA slmA 4424325 - 4424921 + | nucleoid occlusion protein TERM 4803 4425029 - 4424972 - T 100 -21.6 -3.68569 | gap 1, opp_overlap 4424983 4425025, overlap 4424974 4424975 4424995 AAGACATAGAGAGAA CAGCGAATCAAGCTACGCAAAAAGGGC AAACG GCCCTCTTGGCGTAGCTTGATTCGG-G ATTACCCCATGTTAT TERM 4804 4425028 - 4424974 - T 100 -25.3 -3.40967 | opp_overlap 4424983 4425025, overlap 4424972 4424975 4424995 GACATAGAGAGAACA GCGAATCAAGCTACGCAAAAAGGGC AAACG GCCCTCTTGGCGTAGCTTGATTCGG GATTACCCCATGTTA TERM 4805 4425027 - 4424975 - T 100 -28.8 -2.63857 | opp_overlap 4424983 4425025, overlap 4424974 4424972 4424995 ACATAGAGAGAACAG CGAATCAAGCTACGCAAAAAGGGC AAACG GCCCTCTTGGCGTAGCTTGATTCG GGATTACCCCATGTT TERM 4806 4424983 - 4425019 + T 100 -15.2 -3.35867 | opp_overlap 4424975 4424974 4424972 4424995 AGAACAGCGAATCAA GCTACGCAAAAAGGGC AAACG GCCCTCTTGGCGTAGC TTGATTCGGGATTAC TERM 4807 4425007 - 4424995 - T 77 -6.2 -4.68424 | opp_overlap 4424983, overlap 4424975 4424974 4424972 CAAGCTACGCAAAAA GGGC AAACG GCCC TCTTGGCGTAGCTTG pyrE 4425703 - 4425056 - | orotate phosphoribosyltransferase TERM 4808 4425861 - 4425845 - R 100 -9.4 -5.41143 | opp_overlap 4425842 TAGCGGGTAAAAAAA GGCGAC TATCC GTCGCC TAATAAATTTATGAT rph 4426586 - 4425870 - | ribonuclease PH YPDSF_3862 4426713 - 4427576 + | hypothetical protein TERM 4809 4427640 - 4427609 - f 100 -15.9 -5.5208 | opp_overlap 4427612 4427616 CCAGAACACAAAAAA CCAGCAAGCTCGC TAATCT GCGGGCTTGCTGG TTCGCAGGAAAAGCC TERM 4810 4427612 - 4427637 + F 88 -12.6 -2.70932 | opp_overlap 4427609, overlap 4427616 GAACACAAAAAACCA GCAAGCTCGC TAATCT GCGGGCTTGC TGGTTCGCAGGAAAA TERM 4811 4428051 - 4428072 + G 71 -7.3 -4.10566 | CTGGCTGCGGGTCGC CGCCAAATG GATA TGTTTGGCG TTATTATTATTGCCT YPDSF_3863 4427979 - 4428602 + | membrane protein ligB 4430318 - 4428615 - | NAD-dependent DNA ligase LigB TERM 4812 4429065 - 4429053 - G 70 -3.3 -4.8543 | CAAGCGGGATAAAAA CTGAG GTT CACAG CCATGTGGTAAGCGT TERM 4813 4429952 - 4429975 + g 71 -7.4 -4.02206 | gap 1 AGAGATTTTTCCGCC CCGCCATCCAC CTT GTG-AGGGCGG TTTCATCTTTGAGTT TERM 4814 4430786 - 4430774 - g 70 -9.1 -3.54408 | opp_overlap 4430774, overlap 4430770 GGGCAGGGAAATCAA GCCTG ATT CAGGC TTTGTTAAAAACACA TERM 4815 4430774 - 4430786 + G 79 -9.1 -4.15044 | opp_overlap 4430774 4430770 GGGCAGGGAAATCAA GCCTG ATT CAGGC TTTGTTAAAAACACA gmk 4430719 - 4431342 + | guanylate kinase YPDSF_3866 4431397 - 4431663 + | DNA-directed RNA polymerase, omega chain TERM 4816 4432239 - 4432221 - g 70 -4.5 -4.68593 | opp_overlap 4432221 TTCATCATTTAAAAA CCGAGCT GGAAG AGCTGGG TTTTGAAGCACTCTA TERM 4817 4432883 - 4432905 + G 76 -7.6 -4.28977 | opp_overlap 4432883, overlap 4432884 CGCATTGTGGAATTA CCGGCTGGTG CCA CACCGGTCGA TTTTGCCTATGTTGT TERM 4818 4432884 - 4432904 + G 74 -11.1 -3.16302 | opp_overlap 4432883, overlap 4432883 GCATTGTGGAATTAC CGGCTGGTG CCA CACCGGTCG ATTTTGCCTATGTTG YPDSF_3867 4431683 - 4433791 + | bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase TERM 4819 4434178 - 4434164 - g 80 -4.2 -5.14563 | TGGGTCAGGAAAAAA CCGGTA TTT CACCAG AAGCGCTGGCACTGG YPDSF_3868 4433797 - 4434489 + | tRNA guanosine-2'-O-methyltransferase TERM 4820 4436316 - 4436303 - g 71 -5.2 -4.45544 | CGCCATTAAGTAAAA CCGC TCAAAT GCGG TTGCAGGTATTACGT YPDSF_3869 4434490 - 4436571 + | ATP-dependent DNA helicase RecG TERM 4821 4436754 - 4436728 - T 86 -10.1 -3.9749 | gap 1, opp_overlap 4436737, overlap 4436729 4436744 AGGCAGAAGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 4822 4436755 - 4436729 - T 73 -10.1 -2.97771 | gap 1, opp_overlap 4436737, overlap 4436728 4436744 GGCAGAAGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT TERM 4823 4436833 - 4436848 + T 78 -9 -3.81146 | TTGTCAATAACCTCA GCCTCA TTCA TGAGGC TTCTTAATTCCCAGC YPDSF_3870 4438151 - 4436937 - | sodium/glutamate symport carrier protein TERM 4824 4438766 - 4438745 - g 73 -2.9 -5.00616 | GCTGGCGCTAAAAAA CGGTGGG GCAGATAT CCCAACG ATGATGGCGGCGCTG TERM 4825 4439319 - 4439307 - g 75 -9.1 -3.88498 | opp_overlap 4439306 CCGTTATATATGAAA CGCCT AAA AGGCG GTGTACTGGCCAATG YPDSF_3871 4438356 - 4439774 + | membrane permease TERM 4826 4439800 - 4439825 + F 100 -6.9 -5.9873 | gap 1, opp_overlap 4439800 AACACATCACTGAAA TGGTCGGTCATT AAT GATG-CCGGCCA TTTTTTTTATGGTCC YPDSF_3872 4439922 - 4441631 + | exported protein TERM 4827 4441727 - 4441746 + T 79 -8.6 -4.11216 | opp_overlap 4441727 TCGCCCGGCAGCAAA TCACTGGC TCAT GTCAGTGA TTTTAAGGGTACCAG YPDSF_3873 4442689 - 4441766 - | hypothetical protein TERM 4828 4442937 - 4442955 + H 100 -13.2 -4.01078 | CCAGGGGGTAATCTG CTCTCCTG ATT CAGGAGAG TTTATGGTCACTTTT YPDSF_3874 4442959 - 4443981 + | transposase TERM 4829 4444062 - 4444048 - g 77 -11.4 -3.3506 | overlap 4444039 TGGAAAGCCTTATAA GCGCAG CGC CTGCGC TGTCACAACAGGCAG YPDSF_3875 4443981 - 4444760 + | transposase/IS protein YPDSF_3876 4445271 - 4444834 - | D-tyrosyl-tRNA deacylase rbn 4446222 - 4445278 - | ribonuclease BN YPDSF_3878 4446849 - 4446259 - | phosphatase TERM 4830 4447149 - 4447125 - R 100 -14.3 -3.75738 | TAGGAGGAGTAAGAA CTCAGGGCGCC TTG AGCGCCCTAAG TATCAACAATGCAAA YPDSF_3879 4448994 - 4447171 - | GTPase TERM 4831 4450343 - 4450333 - g 71 -6.8 -4.13945 | ACCTTTATGCCAAAA CCGA TGT TCGG CGATAACGGCTCAGG glnA 4449556 - 4450965 + | glutamine synthetase TERM 4832 4451066 - 4451083 + F 100 -11.3 -5.28826 | CCGTGGAAACTTTTG GCCCATC TTAG GATGGGC TTTTTTCTCCACTTT glnL 4451188 - 4452267 + | nitrogen regulation protein NR(II) TERM 4833 4453305 - 4453294 - g 76 -4.4 -4.98531 | overlap 4453287 CGTGGAAAGCAAAAA TCTG CATC CAGA GACCGAAGCGGCGCT glnG 4452275 - 4453687 + | nitrogen regulation protein NR(I) TERM 4834 4453702 - 4453735 + T 83 -11.8 -2.80994 | gap 1, opp_overlap 4453714 4453721 GTTCCCGCCAGATGG TCACCCTCAAGAGCG ATAAC CGCACT-GAGGGTGA TATCGTCAGATTACA YPDSF_3883 4455114 - 4453741 - | coproporphyrinogen III oxidase TERM 4835 4454318 - 4454344 + g 70 -8.6 -3.70102 | opp_overlap 4454317 TGCAAAATATCCAAC CGTTGCTCCGCC GTT GGCAGATCAGCG TCTTTGATTTTACGT YPDSF_3884 4455863 - 4455297 - | hypothetical protein TERM 4836 4456062 - 4456010 - H 100 -13.6 -3.99405 | gap 1, opp_overlap 4456026 4456048, overlap 4456026 GGAATCTAGCAGAAA GAAGAGAAAGAAAAAAGGCGGCAGG TTAA CCTGTCGCCTTTTTTCGCAC-CTTC TGCGGAAGGATATCC TERM 4837 4456026 - 4456047 + H 100 -13.7 -5.03145 | opp_overlap 4456010 4456026 AAGAGAAAGAAAAAA GGCGGCAGG TTAA CCTGTCGCC TTTTTTCGCACCTTC TERM 4838 4456047 - 4456026 - H 100 -11.5 -5.7827 | opp_overlap 4456026, overlap 4456010 AAGAGAAAGAAAAAA GGCGGCAGG TTAA CCTGTCGCC TTTTTTCGCACCTTC YPDSF_3885 4456608 - 4457258 + | GTPase EngB TERM 4839 4457405 - 4457435 + T 76 -11.1 -2.62184 | opp_overlap 4457407 AAAATCCCCATAAAA AACGCCCCAGTCA ATAAA TGACTGGGGCGGC TAATATACAGCCAAA TERM 4840 4457433 - 4457407 - T 100 -18.1 -5.25803 | opp_overlap 4457405 AATCCCCATAAAAAA CGCCCCAGTCA ATAAA TGACTGGGGCG GCTAATATACAGCCA YPDSF_3886 4460464 - 4457666 - | DNA polymerase I TERM 4841 4459130 - 4459147 + g 83 -9.9 -4.19817 | opp_overlap 4459119 ATAAGACTCCAGCAT GGTATCG AAAG CGATACC TTTTAGATCGATACC TERM 4842 4460317 - 4460284 - G 100 -10.5 -4.72272 | gap 1 CTTTTGCATCAAAAA CTACTGCAACAT-GAC TTG GTCGATATTGCAGCAG CAGACTGCGTAGCAT TERM 4843 4460939 - 4460923 - R 100 -6.5 -6.32017 | opp_overlap 4460923 4460922 AATAAATAAAAAAAA GGGGC AACAAAA GCCCC CTCTTTATGTACTAA YPDSF_3887 4461579 - 4460956 - | periplasmic protein disulfide isomerase I YPDSF_3888 4462593 - 4461607 - | serine/threonine protein kinase YPDSF_3889 4462953 - 4462684 - | hypothetical protein mobA 4463107 - 4463694 + | molybdopterin-guanine dinucleotide biosynthesis protein A TERM 4844 4463711 - 4463731 + G 88 -14.1 -3.44051 | opp_overlap 4463709 GAACTACAAGTCACC GCCGCTATT AGG AATAGCGGC TTATAGTGGTACAGG TERM 4845 4463907 - 4463893 - g 78 -10 -3.87815 | opp_overlap 4463895 CTGGAGCGCTACAAA CACTGG TCG CCAGTG ATTGCCGTTGGGCAC YPDSF_3891 4463694 - 4464224 + | molybdopterin-guanine dinucleotide biosynthesis protein B TERM 4846 4464308 - 4464287 - T 84 -10.1 -3.74693 | TGCCACCGTATTAAA GGTGATCGC TCAG GCGGTCACC GAACTCGATAATAAA YPDSF_3892 4465490 - 4464282 - | transposase for the IS285 insertion element TERM 4847 4465948 - 4465982 + H 95 -9.2 -4.50627 | opp_overlap 4465955 TGTGTTTCGCGCACA GCAAAAACCCCACGCT TTG GGCATGGGGTCTTGGC TTTATTTGATGCCTG TERM 4848 4465975 - 4465955 - H 100 -10.4 -4.8048 | opp_overlap 4465948 CGCGCACAGCAAAAA CCCCACGC TTTGG GCATGGGG TCTTGGCTTTATTTG TERM 4849 4466213 - 4466203 - H 74 -6.8 -4.27316 | opp_overlap 4466203 TCTCTCAATTCAAAA CACC TTC GGTG TTGTAAGGTTAAGCC TERM 4850 4467325 - 4467336 + H 74 -4.4 -5.06816 | CCACTTTCGTGTTTG CACA GTGC TGTG TTTTTATTAAACAGT TERM 4851 4467372 - 4467398 + H 70 -9.4 -2.75844 | opp_overlap 4467348 4467350, overlap 4467371 4467374 CCAGCTGGTATCTGC GACTGGCTTCAG CTC CAGGAGCTAGTC CTTTCACCTAACGCC TERM 4852 4467832 - 4467850 + H 82 -10.3 -3.57798 | overlap 4467825 CTTGGTCTTCCGGCG TGCGGGT TTTTC ACCCGCA TTATCGTTACTTATG TERM 4853 4469288 - 4469325 + H 78 -5.7 -4.7629 | opp_overlap 4469282 4469288 4469291, overlap 4469291 ATTGTTAAAGAGCAA TATCGTAAACACGACTT GGTA AAGTCATCTTTACGTTA TTTTTCAGTTCATAA TERM 4854 4469291 - 4469322 + H 78 -7.4 -4.47888 | opp_overlap 4469288 4469282 4469291, overlap 4469288 GTTAAAGAGCAATAT CGTAAACACGACTT GGTA AAGTCATCTTTACG TTATTTTTCAGTTCA TERM 4855 4471805 - 4471788 - g 76 -12.7 -2.6544 | overlap 4471787 CAGGAGAATATGAAG CGGGCAG TATA CTGCCCG GCGAAATAGAGTTGG YPDSF_3893 4471691 - 4472380 + | GntR-famly transcriptional regulator TERM 4856 4473686 - 4473700 + G 76 -4.2 -4.92783 | overlap 4473683 4473687 TGGGATTGCTATCAG TGCGAC TGT GTTGCG TTTTTATGATGGGTT YPDSF_3894 4472460 - 4473884 + | membrane transport protein YPDSF_3895 4474051 - 4473881 - | hypothetical protein YPDSF_3898 4475500 - 4475081 - | D-ribose pyranase TERM 4857 4475672 - 4475704 + r 76 -10 -3.29211 | gap 1, opp_overlap 4475677, overlap 4475667 4475659 4475677 TAGTGTGAATGATGA TAGAAGAGGCCGTTA TGAT TAACGGCCTCT-CAA TTAAATTTCCACTTG TERM 4858 4475677 - 4475700 + r 100 -15.4 -2.58812 | opp_overlap 4475677, overlap 4475672 4475667 4475659 TGAATGATGATAGAA GAGGCCGTTA TGAT TAACGGCCTC TCAATTAAATTTCCA TERM 4859 4475700 - 4475677 - R 100 -15.4 -3.57731 | opp_overlap 4475672 4475667 4475659 4475677 TGAATGATGATAGAA GAGGCCGTTA TGAT TAACGGCCTC TCAATTAAATTTCCA trkD 4477573 - 4475705 - | potassium transport protein Kup TERM 4860 4476139 - 4476172 + g 74 -11.7 -2.72471 | gap 1, opp_overlap 4476140 4476142, overlap 4476138 4476142 TTGCTCGCGACATAT ACACCGCC-GTACCGG GTA CCCGTACTGGCGGTGA CTTCTCTAGTGAAGC TERM 4861 4476171 - 4476140 - G 86 -15.2 -2.98823 | gap 1, opp_overlap 4476139 4476138 4476142, overlap 4476142 TGCTCGCGACATATA CACCGCC-GTACCGG GTA CCCGTACTGGCGGTG ACTTCTCTAGTGAAG TERM 4862 4476169 - 4476142 - G 77 -12 -3.05022 | gap 1, opp_overlap 4476139 4476138 4476142, overlap 4476140 CTCGCGACATATACA CCGCC-GTACCGG GTA CCCGTACTGGCGG TGACTTCTCTAGTGA TERM 4863 4476142 - 4476169 + g 73 -12 -2.64051 | gap 1, opp_overlap 4476142 4476140, overlap 4476139 4476138 CTCGCGACATATACA CCGCC-GTACCGG GTA CCCGTACTGGCGG TGACTTCTCTAGTGA TERM 4864 4477491 - 4477470 - G 73 -3 -4.94902 | TAATGACCAGAAAAA CACTCTCT CAAGGT ATAGAGTG GGCTGGTGCCAATAT TERM 4865 4478406 - 4478396 - g 76 -3.2 -5.18726 | CGGGTACAAGAAAAA CAGA ATT TCCG CTCACTGCTGATCAG TERM 4866 4478474 - 4478458 - g 71 -5.1 -4.46212 | overlap 4478460 CCCGGTAGCAGAAAA CCTCAGT ATC ACTGATG AAGAATTCCACCAGT YPDSF_3900 4477847 - 4479385 + | regulatory ATPase RavA TERM 4867 4479766 - 4479754 - g 86 -6.9 -5.02476 | overlap 4479755 AGACCTGGCAAAAAA CCCGC CAG GCGGA GATAGCCTGCAAACG yieM 4479389 - 4480855 + | hypothetical protein TERM 4868 4480926 - 4480898 - T 100 -9.5 -4.84529 | TGATAAAGTTAAAAA CCCGCGATGACTG ATA CCGTTATCGCGAG TTAGCATAGGGGGAT YPDSF_3902 4481946 - 4480954 - | asparagine synthetase AsnA YPDSF_3903 4482116 - 4482577 + | DNA-binding transcriptional regulator AsnC YPDSF_3904 4482670 - 4483110 + | flavodoxin YPDSF_3905 4483491 - 4485380 + | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA gidB 4485526 - 4486146 + | glucose-inhibited division protein B YPDSF_3907 4486813 - 4487196 + | F0F1 ATP synthase subunit I TERM 4869 4487558 - 4487578 + G 76 -6.1 -4.71426 | TCATCGCACCATTAG CCCTAACAG TCT TTGTTTGGG TTTTATTGATGAACA YPDSF_3908 4487236 - 4488060 + | F0F1 ATP synthase subunit A YPDSF_3909 4488110 - 4488349 + | F0F1 ATP synthase subunit C YPDSF_3910 4488411 - 4488881 + | F0F1 ATP synthase subunit B YPDSF_3911 4488896 - 4489429 + | F0F1 ATP synthase subunit delta YPDSF_3912 4489444 - 4490985 + | F0F1 ATP synthase subunit alpha TERM 4870 4490993 - 4491023 + F 89 -12.7 -2.82516 | gap 1, overlap 4490982 CCTGGTAACGCTATG CGGTCCTGCTTTTC GTTA GGAAAGCAGG-CCG TCTGGTAATGAGGAG TERM 4871 4491814 - 4491791 - g 70 -8 -3.76402 | ATGGTAGCGATGAAA GCCGCCACCG ATAA CGGCGGTAGC CTGATCAAAGAGCTG YPDSF_3913 4491047 - 4491910 + | F0F1 ATP synthase subunit gamma YPDSF_3914 4492066 - 4493448 + | F0F1 ATP synthase subunit beta atpC 4493479 - 4493892 + | F0F1 ATP synthase subunit epsilon TERM 4872 4494016 - 4494041 + F 100 -14.1 -5.22794 | opp_overlap 4494016 TAAGTAACGATAGAA TGCCAGTCGGT GAAA ACTGACTGGCA TTTTTTAATACTTAT TERM 4873 4494041 - 4494016 - f 93 -11.9 -3.62476 | opp_overlap 4494016 TAAGTAACGATAGAA TGCCAGTCGGT GAAA ACTGACTGGCA TTTTTTAATACTTAT TERM 4874 4494242 - 4494275 + F 100 -10.6 -4.57353 | gap 1, opp_overlap 4494242 4494241 TCAATAAATCATAAG CAAGGATTAT-CGAA TTTCT TTCGGATAATCCTTG TTTTCTGTCGTAAAA TERM 4875 4494275 - 4494242 - f 75 -10.6 -2.80654 | gap 1, opp_overlap 4494242, overlap 4494241 TCAATAAATCATAAG CAAGGATTAT-CGAA TTTCT TTCGGATAATCCTTG TTTTCTGTCGTAAAA TERM 4876 4494354 - 4494337 - f 91 -4.8 -5.61596 | ATTTTGACAAAAAAA CGGCAA AAAACG TCGCCG ATCACCGACACTTTT TERM 4877 4494870 - 4494893 + G 70 -8.8 -3.63515 | CAACGTCTGCTGGCC GCTAAGCCCG AGGG CGGGATTGGC TTGTTGACAGTAAAA TERM 4878 4495087 - 4495097 + G 71 -5.4 -4.55287 | TGGATAATAATAATG CTCA AGG TGAG TTTTATATCACTGAC TERM 4879 4495261 - 4495288 + G 71 -5.4 -4.54727 | AAAAATTATTGTTAG CGGGCGTGATGC TATT GGATCCCTCCCG TTTTGATTTGCGCGG glmU 4494513 - 4495883 + | bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase YPDSF_3917 4496084 - 4497913 + | D-fructose-6-phosphate amidotransferase TERM 4880 4497961 - 4497978 + F 100 -9.1 -5.61913 | opp_overlap 4497961 AGCGTATTAACGAAA GCCGGCA AATT TGTCGGC TTTTTTGTCTTTATT YPDSF_3918 4498396 - 4499436 + | phosphate transporter subunit pstC 4499650 - 4500621 + | phosphate transporter permease subunit pstA 4500623 - 4501510 + | phosphate transporter permease subunit YPDSF_3921 4501591 - 4502367 + | phosphate transporter subunit YPDSF_3922 4502455 - 4503177 + | transcriptional regulator PhoU TERM 4881 4503187 - 4503211 + F 100 -7.8 -5.626 | AAATAATATTTAACC CCGGTCAGCC TACTC GTTTGACCGG TTTTTTTATCCACTC YPDSF_3923 4503473 - 4504144 + | hypothetical protein YPDSF_3924 4504364 - 4505218 + | periplasmic solute-binding protein YPDSF_3925 4505401 - 4506138 + | ABC transporter permease TERM 4882 4506243 - 4506263 + G 74 -11.1 -3.0395 | TGGTGATCAGTATCA TGGCTGGGG TAG CCTCAGCCG TATTAGGCACTGTGT YPDSF_3926 4506140 - 4506895 + | amino acid transport system permease YPDSF_3927 4507598 - 4506930 - | 6-phosphogluconate phosphatase TERM 4883 4507068 - 4507053 - G 87 -8.2 -4.75472 | overlap 4507056 4507063 GGCACAGTAATAAAA CACCGG AATA CCGGCG GCAATCCCGGCCTGG TERM 4884 4507779 - 4507805 + H 72 -10.1 -2.88849 | gap 1, opp_overlap 4507768, overlap 4507774 4507780 ACATCCATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCTCTGCC TERM 4885 4507780 - 4507806 + H 84 -10.1 -3.82218 | gap 1, opp_overlap 4507768, overlap 4507774 4507779 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCTCTGCCT TERM 4886 4508026 - 4508011 - H 75 -3.2 -5.19916 | AAAAGAGGTAAAAAA GAGTGT GATC ACGCTC TAAACAAATGATTTT TERM 4887 4508631 - 4508656 + G 76 -6.1 -4.73677 | overlap 4508633 GGTAATCTGACCTCT CACAGTGTACT GTTG GGTGCACTGGG TTTCTTTATTATCGC TERM 4888 4508986 - 4509001 + G 78 -6 -4.75219 | ATGTGGACAGTATCA GCTCCG TTGC CGGTGC TTTTATTGGTACTTC YPDSF_3928 4508034 - 4509419 + | xanthine/uracil permease family protein YPDSF_3929 4509964 - 4510584 + | hypothetical protein TERM 4889 4511381 - 4511337 - T 78 -9.3 -3.73534 | opp_overlap 4511346, overlap 4511339 4511346 TAACCCCAGTAAGAA GATGATCAACCTGCTGCGTGA TAG TGACGCAGCAGGTTATTGAGC AATAAACCGGAGCTT TERM 4890 4511379 - 4511339 - T 80 -10.5 -3.44552 | opp_overlap 4511346, overlap 4511337 4511346 ACCCCAGTAAGAAGA TGATCAACCTGCTGCGTGA TAG TGACGCAGCAGGTTATTGA GCAATAAACCGGAGC TERM 4891 4511346 - 4511372 + T 100 -15.2 -3.62597 | opp_overlap 4511339 4511337 4511346 TAAGAAGATGATCAA CCTGCTGCGTGA TAG TGACGCAGCAGG TTATTGAGCAATAAA TERM 4892 4511372 - 4511346 - T 100 -15.2 -3.30452 | opp_overlap 4511346, overlap 4511339 4511337 TAAGAAGATGATCAA CCTGCTGCGTGA TAG TGACGCAGCAGG TTATTGAGCAATAAA YPDSF_3930 4512594 - 4511395 - | trans-2-enoyl-CoA reductase TERM 4893 4512260 - 4512275 + g 73 -5.4 -4.65895 | opp_overlap 4512260 ATCTCATCAGAGAAC GCATCG CCGT TGATGC TTTTTGCGTACAAGC TERM 4894 4512397 - 4512381 - G 72 -3.6 -4.86731 | GGCGTTCAAAGAAAA CGCCCA GCGTA TCGGCG CCACAACCAAATGCT TERM 4895 4512569 - 4512582 + g 73 -5.9 -4.4891 | opp_overlap 4512564 4512569 GTCACACAGATAAAG CCGCG TACA CGTGG TTTTATAATCATGGG trmE 4514144 - 4512780 - | tRNA modification GTPase TrmE TERM 4896 4513407 - 4513385 - G 71 -7.7 -4.07568 | opp_overlap 4513385, overlap 4513387 TGTGTTCCCGTAAAA CATCACGGG TGGTG CCCGCGATA TCCGTTACAATCGCC TERM 4897 4514262 - 4514238 - R 100 -15.1 -4.40561 | overlap 4514235 CTTCTGTAAAAAGAA TAAGGCGGTCA TAT TGACCGCCCTA AATACTCATGATTAT TERM 4898 4514301 - 4514319 + r 73 -5.9 -4.56597 | GTTATTTTTTCTTCT CGCGGCT GTGTA AGCCACG TTTTTCCAGACCACG YPDSF_3932 4515927 - 4514287 - | putative inner membrane protein translocase component YidC TERM 4899 4514965 - 4514981 + g 82 -6.5 -4.79955 | AGTCAGGTCCAGATG TGGCGCA ATT TCCGCCA TTTTATTCTGAATCT TERM 4900 4515766 - 4515782 + g 70 -9.3 -3.6053 | overlap 4515763 TTGACCCTGACCGCT GCCTGGC ACA GCCTGGC TTGCTTTATCACCGG YPDSF_3933 4516187 - 4515930 - | hypothetical protein TERM 4901 4516149 - 4516113 - GR 100 -16.7 -3.14211 | ACGCGGCCCCAGCAA CGGACTGATTACGAGCT GAT AGCCCCTAATCAGCCCG ATCAGGATGCGGGAG rnpA 4516510 - 4516151 - | ribonuclease P TERM 4902 4516501 - 4516523 + gr 70 -2.8 -4.78572 | gap 1, overlap 4516503 4516504 CCCTAGGAAATGCGA GCTTAACCA CTGAGA TGGTTA-GC TTTTATTACTTAGAA rpmH 4516669 - 4516529 - | 50S ribosomal protein L34