TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.509704 %AT, 3799949 nt, 30728 terms. Intergenic: 0.574832 %AT, H2T: 737608 nt, 5290 terms; T2T: 212649 nt, 3879 terms; H2H: 287026 nt, 3834 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|45439865|ref|NC_005810.1| Yersinia pestis biovar Microtus str. 91001, complete genome (length 4595065) fldA1 461 - 21 - | flavodoxin asnC 1015 - 554 - | DNA-binding transcriptional regulator AsnC asnA 1185 - 2177 + | asparagine synthetase AsnA TERM 1 2205 - 2233 + T 100 -9.5 -4.84529 | ATCCCCCTATGCTAA CTCGCGATAACGG TAT CAGTCATCGCGGG TTTTTAACTTTATCA yieM 3742 - 2276 - | hypothetical protein TERM 2 3365 - 3377 + g 86 -6.9 -5.02476 | overlap 3366 CGTTTGCAGGCTATC TCCGC CTG GCGGG TTTTTTGCCAGGTCT YP_0005 5314 - 3746 - | regulatory ATPase RavA TERM 3 4687 - 4703 + g 71 -5.1 -4.46212 | overlap 4689 ACTGGTGGAATTCTT CATCAGT GAT ACTGAGG TTTTCTGCTACCGGG TERM 4 4755 - 4765 + g 76 -3.2 -5.18726 | CTGATCAGCAGTGAG CGGA AAT TCTG TTTTTCTTGTACCCG TERM 5 5670 - 5691 + G 73 -3 -4.94902 | ATATTGGCACCAGCC CACTCTAT ACCTTG AGAGAGTG TTTTTCTGGTCATTA TERM 6 7022 - 6989 - g 74 -11.7 -2.72471 | gap 1, opp_overlap 6990 6992, overlap 6988 6992 GCTTCACTAGAGAAG TCACCGCCAGTACGGG TAC CCGGTAC-GGCGGTGT ATATGTCGCGAGCAA TERM 7 6990 - 7021 + G 86 -15.2 -2.98823 | gap 1, opp_overlap 6989 6988 6992, overlap 6992 CTTCACTAGAGAAGT CACCGCCAGTACGGG TAC CCGGTAC-GGCGGTG TATATGTCGCGAGCA TERM 8 7019 - 6992 - g 73 -12 -2.64051 | gap 1, opp_overlap 6990 6992, overlap 6989 6988 TCACTAGAGAAGTCA CCGCCAGTACGGG TAC CCGGTAC-GGCGG TGTATATGTCGCGAG TERM 9 6992 - 7019 + G 77 -12 -3.05022 | gap 1, opp_overlap 6992 6989 6988, overlap 6990 TCACTAGAGAAGTCA CCGCCAGTACGGG TAC CCGGTAC-GGCGG TGTATATGTCGCGAG trkD 5588 - 7456 + | potassium transport protein Kup TERM 10 7489 - 7457 - f 76 -10 -3.29211 | gap 1, opp_overlap 7461, overlap 7452 7445 7461 CAAGTGGAAATTTAA TTG-AGAGGCCGTTA ATCA TAACGGCCTCTTCTA TCATCATTCACACTA TERM 11 7484 - 7461 - f 100 -15.4 -2.58812 | opp_overlap 7461, overlap 7457 7452 7445 TGGAAATTTAATTGA GAGGCCGTTA ATCA TAACGGCCTC TTCTATCATCATTCA TERM 12 7461 - 7484 + F 100 -15.4 -3.57731 | opp_overlap 7461 7457 7452 7445 TGGAAATTTAATTGA GAGGCCGTTA ATCA TAACGGCCTC TTCTATCATCATTCA rbsD1 7661 - 8080 + | D-ribose pyranase rbsK1 8131 - 9057 + | ribokinase purR1 9077 - 9280 + | transcriptional regulator proP1 10701 - 9277 - | putative membrane transport protein TERM 13 9475 - 9461 - G 76 -4.2 -4.92783 | overlap 9462 9468 AACCCATCATAAAAA CGCAAC ACA GTCGCA CTGATAGCAATCCCA fadR1 11470 - 10781 - | putative GntR-famly transcriptional regulator TERM 14 11356 - 11373 + g 76 -12.7 -2.6544 | overlap 11355 CCAACTCTATTTCGC CGGGCAG TATA CTGCCCG CTTCATATTCTCCTG TERM 15 13873 - 13836 - H 78 -5.7 -4.7629 | opp_overlap 13836 13830 13839, overlap 13839 TTATGAACTGAAAAA TAACGTAAAGATGACTT TACC AAGTCGTGTTTACGATA TTGCTCTTTAACAAT TERM 16 13870 - 13839 - H 78 -7.4 -4.47888 | opp_overlap 13839 13836 13830, overlap 13836 TGAACTGAAAAATAA CGTAAAGATGACTT TACC AAGTCGTGTTTACG ATATTGCTCTTTAAC TERM 17 15329 - 15311 - H 82 -10.3 -3.57798 | overlap 15324 CATAAGTAACGATAA TGCGGGT GAAAA ACCCGCA CGCCGGAAGACCAAG TERM 18 15789 - 15763 - H 70 -9.4 -2.75844 | opp_overlap 15777 15785, overlap 15762 15765 GGCGTTAGGTGAAAG GACTAGCTCCTG GAG CTGAAGCCAGTC GCAGATACCAGCTGG TERM 19 15836 - 15825 - H 74 -4.4 -5.06816 | ACTGTTTAATAAAAA CACA GCAC TGTG CAAACACGAAAGTGG TERM 20 16948 - 16958 + H 74 -6.8 -4.27316 | opp_overlap 16948 GGCTTAACCTTACAA CACC GAA GGTG TTTTGAATTGAGAGA TERM 21 17213 - 17179 - H 95 -9.2 -4.50627 | opp_overlap 17186 CAGGCATCAAATAAA GCCAAGACCCCATGCC CAA AGCGTGGGGTTTTTGC TGTGCGCGAAACACA TERM 22 17186 - 17206 + H 100 -10.4 -4.8048 | opp_overlap 17179 CAAATAAAGCCAAGA CCCCATGC CCAAA GCGTGGGG TTTTTGCTGTGCGCG TERM 23 18872 - 18893 + G 77 -10.1 -3.74693 | TTTATTATCGAGTTC GGTGACCGC CTGA GCGATCACC TTTAATACGGTGGCA YP_0012 17690 - 18898 + | transposase for the IS285 insertion element mobB 19513 - 18956 - | molybdopterin-guanine dinucleotide biosynthesis protein B TERM 24 19273 - 19287 + gT 84 -10 -3.87815 | opp_overlap 19275 GTGCCCAACGGCAAT CACTGG CGA CCAGTG TTTGTAGCGCTCCAG TERM 25 19469 - 19449 - GT 100 -14.1 -3.44051 | opp_overlap 19447 CCTGTACCACTATAA GCCGCTATT CCT AATAGCGGC GGTGACTTGTAGTTC mobA 20127 - 19486 - | molybdopterin-guanine dinucleotide biosynthesis protein A YP_0015 20227 - 20496 + | hypothetical protein YP_0016 20587 - 21573 + | serine/threonine protein kinase dsbA 21601 - 22224 + | periplasmic protein disulfide isomerase I TERM 26 22241 - 22257 + F 100 -6.5 -6.32017 | opp_overlap 22240 22241 TTAGTACATAAAGAG GGGGC TTTTGTT GCCCC TTTTTTTTATTTATT TERM 27 22863 - 22896 + G 100 -10.5 -4.72272 | gap 1 ATGCTACGCAGTCTG CTGCTGCAATATCGAC CAA GTC-ATGTTGCAGTAG TTTTTGATGCAAAAG TERM 28 24050 - 24033 - g 83 -9.9 -4.19817 | opp_overlap 24045 GGTATCGATCTAAAA GGTATCG CTTT CGATACC ATGCTGGAGTCTTAT polA 22716 - 25514 + | DNA polymerase I TERM 29 25775 - 25745 - f 76 -11.1 -2.62184 | opp_overlap 25747 TTTGGCTGTATATTA GCCGCCCCAGTCA TTTAT TGACTGGGGCGTT TTTTGTGCCCAGAAA TERM 30 25747 - 25773 + F 100 -18.1 -5.24129 | opp_overlap 25745 TGGCTGTATATTAGC CGCCCCAGTCA TTTAT TGACTGGGGCG TTTTTTGTGCCCAGA TERM 31 25792 - 25810 + F 100 -16 -3.07307 | opp_overlap 25792 TTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC TERM 32 25810 - 25792 - f 100 -16 -4.36914 | opp_overlap 25792 TTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC tnp_1 25872 - 26381 + | transposase for the IS1541 insertion element TERM 33 26455 - 26487 + T 100 -11.3 -3.92143 | opp_overlap 26462, overlap 26459 26461 26462 CCTTATAGGCGCATA TGAAAAACCTCCGGC TAT GCCGGAGGATATTTA TTTATGGGGATTTTG TERM 34 26459 - 26483 + T 100 -9.9 -4.55697 | opp_overlap 26462, overlap 26455 26461 26462 ATAGGCGCATATGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTTATGGGGAT TERM 35 26461 - 26481 + T 100 -12.5 -3.88703 | opp_overlap 26462, overlap 26459 26455 26462 AGGCGCATATGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTTATGGGG TERM 36 26480 - 26462 - T 100 -16 -4.8048 | opp_overlap 26462 26461 26459 26455 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTATGGG TERM 37 26462 - 26480 + T 100 -16 -2.92499 | opp_overlap 26462, overlap 26461 26459 26455 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTATGGG YP_0020 27283 - 26633 - | GTPase EngB TERM 38 27829 - 27881 + H 100 -13.6 -3.99405 | gap 1, opp_overlap 27819 27844, overlap 27844 GGATATCCTTCCGCA GAAG-GTGCGAAAAAAGGCGACAGG TTAA CCTGCCGCCTTTTTTCTTTCTCTTC TTTCTGCTAGATTCC TERM 39 27844 - 27865 + H 100 -11.5 -5.7827 | opp_overlap 27844, overlap 27829 GAAGGTGCGAAAAAA GGCGACAGG TTAA CCTGCCGCC TTTTTTCTTTCTCTT TERM 40 27865 - 27844 - H 100 -13.7 -5.03145 | opp_overlap 27844 27829 GAAGGTGCGAAAAAA GGCGACAGG TTAA CCTGCCGCC TTTTTTCTTTCTCTT YP_0021 28028 - 28594 + | hypothetical protein TERM 41 29573 - 29547 - g 70 -8.6 -3.70102 | opp_overlap 29546 ACGTAAAATCAAAGA CGCTGATCTGCC AAC GGCGGAGCAACG GTTGGATATTTTGCA hemN1 28777 - 30150 + | coproporphyrinogen III oxidase TERM 42 30189 - 30156 - T 83 -11.8 -2.80994 | gap 1, opp_overlap 30160 30167 TGTAATCTGACGATA TCACCCTC-AGTGCG GTTAT CGCTCTTGAGGGTGA CCATCTGGCGGGAAC glnG 31616 - 30204 - | nitrogen regulation protein NR(I) TERM 43 30586 - 30597 + g 76 -4.4 -4.98531 | overlap 30593 AGCGCCGCTTCGGTC TCTG GATG CAGA TTTTTGCTTTCCACG glnL 32673 - 31624 - | nitrogen regulation protein NR(II) TERM 44 32825 - 32808 - R 100 -11.3 -5.28826 | AAAGTGGAGAAAAAA GCCCATC CTAA GATGGGC CAAAAGTTTCCACGG glnA 34335 - 32926 - | glutamine synthetase TERM 45 33548 - 33558 + g 71 -6.8 -4.13945 | CCTGAGCCGTTATCG CCGA ACA TCGG TTTTGGCATAAAGGT YP_0026 34679 - 34521 - | hypothetical protein bipA 34897 - 36720 + | putative GTPase TERM 46 36742 - 36766 + F 100 -14.3 -3.75738 | TTTGCATTGTTGATA CTTAGGGCGCT CAA GGCGCCCTGAG TTCTTACTCCTCCTA YP_0028 37042 - 37632 + | phosphatase rbn 37669 - 38613 + | ribonuclease BN dtd 38620 - 39057 + | D-tyrosyl-tRNA deacylase dnaC_1 39913 - 39131 - | transposase/IS protein TERM 47 39829 - 39843 + g 77 -11.4 -3.3506 | overlap 39842 CTGCCTGTTGTGACA GCGCAG GCG CTGCGC TTATAAGGCTTTCCA YP_0032 40932 - 39910 - | transposase for insertion sequence IS100 TERM 48 40954 - 40936 - H 100 -13.2 -4.01078 | AAAAGTGACCATAAA CTCTCCTG AAT CAGGAGAG CAGATTACCCCCTGG wecD1 41326 - 42126 + | hypothetical protein TERM 49 42165 - 42146 - T 79 -8.6 -4.11216 | opp_overlap 42146 CTGGTACCCTTAAAA TCACTGAC ATGA GCCAGTGA TTTGCTGCCGGGCGA YP_0034 43616 - 42261 - | hypothetical protein TERM 50 44092 - 44067 - R 100 -6.9 -5.9873 | gap 1, opp_overlap 44067 GGACCATAAAAAAAA TGGCCGG-CATC ATT AATGACCGACCA TTTCAGTGATGTGTT uraA 45527 - 44118 - | putative membrane permease TERM 51 44573 - 44585 + g 75 -9.1 -3.88498 | opp_overlap 44572 CATTGGCCAGTACAC CGCCT TTT AGGCG TTTCATATATAACGG TERM 52 45126 - 45147 + g 73 -2.9 -5.00616 | CAGCGCCGCCATCAT CGTTGGG ATATCTGC CCCACCG TTTTTTAGCGCCAGC gltS 45741 - 46955 + | sodium/glutamate symport carrier protein TERM 53 47059 - 47044 - T 78 -9 -3.81146 | GCTGGGAATTAAGAA GCCTCA TGAA TGAGGC TGAGGTTATTGACAA TERM 54 47137 - 47163 + T 73 -10.1 -2.97771 | gap 1, opp_overlap 47126, overlap 47132 47138 ACATCCATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCTTCTGCC TERM 55 47138 - 47164 + T 86 -10.1 -3.9749 | gap 1, opp_overlap 47126, overlap 47132 47137 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCTTCTGCCT recG 49402 - 47321 - | ATP-dependent DNA helicase RecG TERM 56 47576 - 47589 + g 71 -5.2 -4.45544 | ACGTAATACCTGCAA CCGC ATTTGA GCGG TTTTACTTAATGGCG trmH 50095 - 49403 - | tRNA guanosine-2'-O-methyltransferase TERM 57 49714 - 49728 + g 80 -4.2 -5.14563 | CCAGTGCCAGCGCTT CTGGTG AAA TACCGG TTTTTTCCTGACCCA spoT 52209 - 50101 - | bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase TERM 58 51009 - 50987 - G 76 -7.6 -4.28977 | opp_overlap 50987, overlap 50988 ACAACATAGGCAAAA TCGACCGGTG TGG CACCAGCCGG TAATTCCACAATGCG TERM 59 51008 - 50988 - G 74 -11.1 -3.16302 | opp_overlap 50987, overlap 50987 CAACATAGGCAAAAT CGACCGGTG TGG CACCAGCCG GTAATTCCACAATGC TERM 60 51653 - 51671 + g 70 -4.5 -4.68593 | opp_overlap 51653 TAGAGTGCTTCAAAA CCCAGCT CTTCC AGCTCGG TTTTTAAATGATGAA rpoZ 52504 - 52229 - | DNA-directed RNA polymerase subunit omega gmk 53182 - 52559 - | guanylate kinase TERM 61 53115 - 53127 + g 70 -9.1 -3.54408 | opp_overlap 53115, overlap 53111 TGTGTTTTTAACAAA GCCTG AAT CAGGC TTGATTTCCCTGCCC TERM 62 53127 - 53115 - G 79 -9.1 -4.15044 | opp_overlap 53115 53111 TGTGTTTTTAACAAA GCCTG AAT CAGGC TTGATTTCCCTGCCC TERM 63 53949 - 53926 - g 71 -7.4 -4.02206 | gap 1 AACTCAAAGATGAAA CCGCCCT-CAC AAG GTGGATGGCGG GGCGGAAAAATCTCT TERM 64 54836 - 54848 + G 70 -3.3 -4.8543 | ACGCTTACCACATGG CTGTG AAC CTCAG TTTTTATCCCGCTTG ligB 53583 - 55286 + | NAD-dependent DNA ligase LigB YP_0043 55922 - 55299 - | hypothetical protein TERM 65 55850 - 55829 - G 71 -7.3 -4.10566 | AGGCAATAATAATAA CGCCAAACA TATC CATTTGGCG GCGACCCGCAGCCAG TERM 66 56261 - 56292 + r 100 -15.9 -5.5208 | opp_overlap 56264 56268 GGCTTTTCCTGCGAA CCAGCAAGCCCGC AGATTA GCGAGCTTGCTGG TTTTTTGTGTTCTGG TERM 67 56289 - 56264 - R 88 -12.6 -2.70932 | opp_overlap 56261, overlap 56268 TTTTCCTGCGAACCA GCAAGCCCGC AGATTA GCGAGCTTGC TGGTTTTTTGTGTTC YP_0044 57188 - 56325 - | hypothetical protein rph 57315 - 58031 + | ribonuclease PH TERM 68 58040 - 58056 + F 100 -9.4 -5.41143 | opp_overlap 58037 ATCATAAATTTATTA GGCGAC GGATA GTCGCC TTTTTTTACCCGCTA pyrE 58198 - 58845 + | orotate phosphoribosyltransferase TERM 69 58872 - 58929 + T 100 -21.6 -3.68569 | gap 1, opp_overlap 58863 58882, overlap 58873 58874 58894 ATAACATGGGGTAAT C-CCGAATCAAGCTACGCCAAGAGGGC CGTTT GCCCTTTTTGCGTAGCTTGATTCGCTG TTCTCTCTATGTCTT TERM 70 58873 - 58927 + T 100 -25.3 -3.40967 | opp_overlap 58863 58882, overlap 58872 58874 58894 TAACATGGGGTAATC CCGAATCAAGCTACGCCAAGAGGGC CGTTT GCCCTTTTTGCGTAGCTTGATTCGC TGTTCTCTCTATGTC TERM 71 58874 - 58926 + T 100 -28.8 -2.63857 | opp_overlap 58863 58882, overlap 58873 58872 58894 AACATGGGGTAATCC CGAATCAAGCTACGCCAAGAGGGC CGTTT GCCCTTTTTGCGTAGCTTGATTCG CTGTTCTCTCTATGT TERM 72 58918 - 58882 - T 100 -15.2 -3.35867 | opp_overlap 58874 58873 58872 58894 GTAATCCCGAATCAA GCTACGCCAAGAGGGC CGTTT GCCCTTTTTGCGTAGC TTGATTCGCTGTTCT TERM 73 58894 - 58906 + T 77 -6.2 -4.68424 | opp_overlap 58882, overlap 58874 58873 58872 CAAGCTACGCCAAGA GGGC CGTTT GCCC TTTTTGCGTAGCTTG slmA 59576 - 58980 - | nucleoid occlusion protein TERM 74 59110 - 59145 + g 72 -4 -4.82901 | opp_overlap 59109, overlap 59109 59110 TGGGTGGCCAGTAAC GCTTCATCATGGATAA AGCC TTGTCCATCACGCAGC TTTTTCTCACGAAGG TERM 75 59313 - 59330 + g 76 -4.8 -4.90906 | CAGCAGGATTAAGCG GAGGCG ATTAAA CGTCTC TTTTTCATCTTGTAG TERM 76 59629 - 59656 + r 91 -12 -3.56562 | gap 1, opp_overlap 59624 AAAACCCAAACACCG GCCGCTCTGGGAA CAA TGCCCAG-GCGGC TTATGTGATAGCTTT dut 60168 - 59698 - | deoxyuridine 5'-triphosphate nucleotidohydrolase dfp 61348 - 60134 - | bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase TERM 77 61179 - 61168 - GH 72 -7.2 -4.04209 | GCAAATCATCAGAAA CGGG ATAG CCCG AGACTGCCTGTAGCG radC 61545 - 62213 + | DNA repair protein RadC rpmB 62476 - 62712 + | 50S ribosomal protein L28 rpmG 62724 - 62891 + | 50S ribosomal protein L33 TERM 78 62898 - 62877 - f 83 -8.9 -4.07877 | GTACTCTATAAAGAA GCTAAAATT AAGT AATTTTAGC GGACTAAGAAAAACC TERM 79 62933 - 62906 - f 95 -12.8 -3.16683 | opp_overlap 62912, overlap 62912 ATTTTAGCGGACTAA GAAAAACCCGGC CTTG GCCGGGTTTTTT ATTATATAAAGTACA TERM 80 62927 - 62912 - f 100 -11.8 -5.1356 | opp_overlap 62912, overlap 62906 GCGGACTAAGAAAAA CCCGGC CTTG GCCGGG TTTTTTATTATATAA TERM 81 62912 - 62927 + F 100 -11.8 -5.60689 | opp_overlap 62912 62906 GCGGACTAAGAAAAA CCCGGC CTTG GCCGGG TTTTTTATTATATAA mutM 62974 - 63783 + | formamidopyrimidine-DNA glycosylase coaD 64268 - 63789 - | phosphopantetheine adenylyltransferase kdtX 65047 - 64265 - | lipopolysaccharide core biosynthesis glycosyl transferase kdtA 66433 - 65048 - | 3-deoxy-D-manno-octulosonic-acid transferase rfaC 67734 - 66745 - | ADP-heptose:LPS heptosyl transferase I rfaF 68774 - 67710 - | ADP-heptose:LPS heptosyltransferase II rfaD 69737 - 68805 - | ADP-L-glycero-D-mannoheptose-6-epimerase kbl 69983 - 71194 + | 2-amino-3-ketobutyrate coenzyme A ligase tdh 71204 - 72229 + | L-threonine 3-dehydrogenase TERM 82 72242 - 72282 + T 86 -11.3 -3.3506 | opp_overlap 72280, overlap 72235 TAGTTTATCCCCTTC GGGCTTGGTGTTGCA AAACTACCCGC TGCGATACCAAGCCC TTGTCAGGATTTACG nlpD1 74695 - 73325 - | hypothetical protein TERM 83 73586 - 73564 - G 71 -6.2 -4.28548 | opp_overlap 73568 73575, overlap 73567 AGTCAGCCAGTAAAA CACGGCCATC GGC GATGGCTTTG ACTTCGCTGCCTTCA TERM 84 73568 - 73582 + g 77 -10 -3.76952 | opp_overlap 73567 73564, overlap 73575 AGCCAGTAAAACACG GCCATC GGC GATGGC TTTGACTTCGCTGCC TERM 85 74405 - 74419 + g 95 -2.1 -6.13503 | TTTTAGTTGATCCAG CAATG AACTG CGTTG TTTTTTTTGTTGCTG TERM 86 74648 - 74606 - G 77 -12.1 -3.11634 | opp_overlap 74635, overlap 74610 CGGTAGACGACTCAA CTTATCTGACAGCAGAGAG GGAGA CTCTCTACCGTCAGAGACG GCATCTTTCGTAGTT TERM 87 74644 - 74610 - G 86 -15.9 -2.55722 | opp_overlap 74635, overlap 74606 AGACGACTCAACTTA TCTGACAGCAGAGAG GGAGA CTCTCTACCGTCAGA GACGGCATCTTTCGT gpmI 76252 - 74705 - | phosphoglyceromutase TERM 88 74869 - 74898 + g 70 -8.6 -3.74747 | gap 1 GGCTGGTATGGGCGG TGTGTG-CCTGGC CAGTT GCCGGGTCACGCA TTTGCTCAGCGTTGC TERM 89 75831 - 75819 - G 70 -9.1 -3.6269 | opp_overlap 75819 75818, overlap 75817 GCATGCAGATAAATA GCGGT TGC ACCGC GTTTAGCCGCCAGCT pspE1 76649 - 77083 + | hypothetical protein TERM 90 77425 - 77445 + G 80 -10.4 -3.68827 | ACGCCCTGGATGCGC GCGGTGGG CTAGA CCCACTGC TTTAACTCGTCAGTG grxC 77202 - 77450 + | glutaredoxin 3 secB 77538 - 78014 + | preprotein translocase subunit SecB TERM 91 78627 - 78639 + G 74 -7.7 -4.26076 | overlap 78607 78603 TCGGTGCAGGTATGT CCGAT GGC ATCGG TTTTGGTGCGAATGC gpsA 78014 - 79033 + | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase YP_0069 79093 - 79233 + | hypothetical protein cysE 79299 - 80120 + | serine acetyltransferase cspR 80731 - 80243 - | putative methyltransferase TERM 92 81238 - 81248 + G 80 -2.4 -5.50723 | TTGGCAGCTCAACTG GGGC TTA GCAC TTTTTATTTTCATCG ada 80920 - 81984 + | bifunctional regulatory protein/DNA repair protein cpxA 83409 - 82033 - | two-component sensor protein TERM 93 82172 - 82185 + g 70 -9.5 -3.32498 | CCTGTTCCTCCCGAC GCCCG ATCT CGGGC TTCATCTGTACGATA TERM 94 82395 - 82384 - G 76 -7.2 -4.35644 | overlap 82385 82386 AGGATTACAAAATAA GGGC CATG GCCC CGGAGGTGCCGTGAC cpxR1 84128 - 83406 - | DNA-binding transcriptional regulator CpxR TERM 95 84422 - 84407 - g 76 -6.8 -4.49316 | ATGATGAACAAGAAA GGCGAC CGCG GTCACC ATAACATGTTTGATG TERM 96 84779 - 84734 - g 70 -3.3 -4.75404 | overlap 84746 84768 AAATTGCAGCAAAAA CCAGCAGCACAACCTTCTTCT GCCC AGAAGTAAGTAGTAGTACTAG TAACACCCTGTTTTC cpxP 84278 - 84766 + | periplasmic stress adaptor protein CpxP TERM 97 84823 - 84841 + F 100 -14.6 -5.71638 | CCATCCCTGTCTTTC GCCCTCCA TGA TGGAGGGC TTTTTTTGCTTATTG YP_0076 85223 - 85399 + | hypothetical protein YP_0077 85444 - 86403 + | hypothetical protein YP_0078 86593 - 86471 - | putative transposase TERM 98 86688 - 86666 - H 74 -7 -4.2535 | AGACCATAGTGAAAA CGGCGGAATA CGG TATTCCACAG ACCAGAAATTCTCTG fieF 86965 - 87867 + | ferrous iron efflux protein F pfkA 88085 - 89068 + | 6-phosphofructokinase TERM 99 89093 - 89145 + F 100 -9.5 -5.00138 | gap 3, opp_overlap 89093 TCGCTCATTCATCAA GCCCTCGAAAT-TGAACTGATCCCAA AAAG TTGGG--CAGTTTACATTACGAGGGC TTTTTACTTTCGGTC sbp 89256 - 90278 + | sulfate transporter subunit TERM 100 90406 - 90443 + T 77 -8.5 -3.91897 | gap 1, opp_overlap 90414 TACCAACCGCTTTAT CG-CCAACACCACATCGT TGT ATGTTGTGGTGTTGAACG TTTATCGCTACCGCG modA1 91346 - 90528 - | hypothetical protein TERM 101 91376 - 91342 - G 73 -12.3 -2.63623 | gap 1, opp_overlap 91372, overlap 91341 91339 91337 TGCGCCAAAAGACAG GCCACCGAAAAC-AGG ATGA CCTTGTCTTCAGTGGC TAAGCGACGTTTAAA citT1 92849 - 91422 - | putative membrane transport protein dnaC_2 93991 - 93209 - | transposase/IS protein TERM 102 93907 - 93921 + g 77 -11.4 -3.3506 | overlap 93920 CTGCCTGTTGTGACA GCGCAG GCG CTGCGC TTATAAGGCTTTCCA YP_0086 95010 - 93988 - | transposase for insertion sequence IS100 TERM 103 95032 - 95014 - RH 100 -13.2 -4.01078 | AAAAGTGACCATAAA CTCTCCTG AAT CAGGAGAG CAGATTACCCCCTGG TERM 104 95307 - 95297 - RH 88 -6.8 -5.15634 | CAGGTCACCAAAAAA GCCA TCA TGGC ATTCGGAGGTCGGCG YP_0087 96405 - 95584 - | hypothetical protein TERM 105 96095 - 96122 + gH 72 -7.6 -3.76369 | gap 1 GCACCAAGAACATTT GCCGCCGCTTGCG CTT CG-GTGTGGCGGC TTGCTTTTACTCTTT lysR1 96398 - 97693 + | transcriptional regulator TERM 106 97866 - 97887 + Tr 85 -5.8 -5.1523 | opp_overlap 97860 97866, overlap 97860 97858 TTGGATATATAAAAA CCGGCG CTTTTATTTA CGCCGG TTTTTGTGTTGTACC TERM 107 97887 - 97866 - TR 84 -6.5 -5.03994 | opp_overlap 97866 97860 97858, overlap 97860 TTGGATATATAAAAA CCGGCGC TTTTATTT ACGCCGG TTTTTGTGTTGTACC tpiA 98692 - 97925 - | triosephosphate isomerase TERM 108 98736 - 98750 + r 80 -10 -3.70902 | opp_overlap 98736 98733 GGTCAATAATAATGA CTGCCT GAC AGGCAG TTTACCTGTCCAACA TERM 109 98750 - 98736 - R 73 -10 -3.03309 | opp_overlap 98736, overlap 98733 GGTCAATAATAATGA CTGCCT GAC AGGCAG TTTACCTGTCCAACA YP_0090 99456 - 98821 - | hypothetical protein YP_0091 99538 - 100038 + | hypothetical protein fpr 101125 - 100379 - | ferredoxin-NADP reductase TERM 110 101256 - 101227 - R 70 -7.8 -3.68619 | TCTAACTGATGTAAA CTTTACGGCGCT TTTACG AGCGCCGTGCAG AATAAAAATGATTGC glpX 102290 - 101280 - | fructose 1,6-bisphosphatase II TERM 111 101542 - 101556 + g 73 -9.2 -3.70446 | overlap 101543 CGTAATAACTCTTGT TCGCCG ATG CGGCGG TTATCTTCACTGTCG TERM 112 102430 - 102452 + r 80 -9.1 -3.93578 | opp_overlap 102430, overlap 102425 TCTCACAACGAAAAA CGCGCCATC GGGGG GATAGCGCG TTGTGTTTGGTTTAA TERM 113 102452 - 102430 - R 100 -11.3 -4.93365 | opp_overlap 102430 102425 TCTCACAACGAAAAA CGCGCCATC GGGGG GATAGCGCG TTGTGTTTGGTTTAA glpK1 104050 - 102527 - | glycerol kinase TERM 114 102557 - 102568 + g 74 -3.6 -5.01732 | TTCCCAATCCCGGGC GCGG GCCA CTGC TTTTTTCCAGCCCTT TERM 115 103234 - 103244 + g 79 -5.4 -5.0538 | GCAGGAAGCAACCCG TACC GTA GGTA TTTTTTGCCATGCCC glpF 105075 - 104227 - | glycerol uptake facilitator protein YP_0096 105324 - 105085 - | hypothetical protein YP_0097 105687 - 105926 + | hypothetical protein TERM 116 106060 - 106028 - T 100 -11.3 -4.44046 | opp_overlap 106035, overlap 106032 106034 106035 GTCAGCGGAAATAAA TAAATATCCTCCGGC ATA GCCGGAGGTTTTTCA TATGCGCCTATAAGG TERM 117 106056 - 106032 - T 100 -9.9 -4.78326 | opp_overlap 106035, overlap 106028 106034 106035 GCGGAAATAAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCATATGCGCCTAT TERM 118 106054 - 106034 - T 100 -12.5 -3.99693 | opp_overlap 106035, overlap 106032 106028 106035 GGAAATAAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 119 106035 - 106053 + T 100 -16 -4.8048 | opp_overlap 106034 106032 106028 106035 GAAATAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 120 106053 - 106035 - T 100 -16 -2.98189 | opp_overlap 106035, overlap 106034 106032 106028 GAAATAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC tnp_2 106643 - 106134 - | transposase for the IS1541 insertion element TERM 121 106723 - 106705 - H 100 -16 -3.07307 | opp_overlap 106705 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAG TERM 122 106705 - 106723 + H 100 -16 -4.36914 | opp_overlap 106705 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAG TERM 123 106767 - 106738 - H 100 -13.7 -3.28712 | opp_overlap 106743, overlap 106743 GTTTTCTGGGCACAA GTAAAGGGCGATA TCAG TATCGCCCTTTTC TGTGGGTGCGCCGAT TERM 124 106743 - 106762 + H 100 -12.2 -4.55287 | opp_overlap 106738 106743 CTGGGCACAAGTAAA GGGCGATA TCAG TATCGCCC TTTTCTGTGGGTGCG TERM 125 106762 - 106743 - H 100 -12.2 -3.9941 | opp_overlap 106743, overlap 106738 CTGGGCACAAGTAAA GGGCGATA TCAG TATCGCCC TTTTCTGTGGGTGCG YP_0099 106769 - 106975 + | hypothetical protein sunT 109098 - 106984 - | putative secretion ATPase acrA1 110407 - 109091 - | hypothetical protein YP_0102 110596 - 110835 + | hypothetical protein TERM 126 110844 - 110869 + F 100 -14.1 -3.33815 | opp_overlap 110844 GCAGTAATAAGTAAA TATGCCAGCGT GAAA GCGCTGGCATA TTAATTGAAAGGGAT TERM 127 110869 - 110844 - f 100 -13.4 -4.09805 | opp_overlap 110844 GCAGTAATAAGTAAA TATGCCAGCG TGAAAG CGCTGGCATA TTAATTGAAAGGGAT YP_0103 111010 - 111159 + | hypothetical protein YP_0104 111462 - 112049 + | hypothetical protein menG 112651 - 112166 - | ribonuclease activity regulator protein RraA menA 113722 - 112793 - | 1,4-dihydroxy-2-naphthoate octaprenyltransferase TERM 128 113668 - 113691 + g 83 -13.2 -3.27029 | overlap 113662 113667 113666 GTGGTCGTAGGCTTT CCAGCCAAGC CTGG GTTTGGCTGG TGTTGATTGATAGGC TERM 129 113839 - 113817 - R 70 -2.8 -5.06451 | TATCATGTCAAAAAA TTATGACGTT ATC AAAATCATAA TGCGATAAGAATCAT TERM 130 113898 - 113868 - R 100 -15.4 -4.9934 | overlap 113871 ATAATACGATAAAAA CAAGAGTGGGAGGC GAT GCCTCCCACTCGGG ATACTCCATACTGGA TERM 131 113895 - 113871 - R 100 -20.1 -4.57057 | overlap 113868 ATACGATAAAAACAA GAGTGGGAGGC GAT GCCTCCCACTC GGGATACTCCATACT hslU 115277 - 113946 - | ATP-dependent protease ATP-binding subunit hslV 115872 - 115348 - | ATP-dependent protease peptidase subunit ftsN 116817 - 115972 - | cell division protein FtsN cytR1 117911 - 116883 - | DNA-binding transcriptional regulator CytR TERM 132 118180 - 118133 - R 78 -5.6 -4.85918 | GATCAGACAATAAAA GATCGGGCGAACCCCTTT TTCTTGACGCTG CAAGGGGTTCGCCATATC CCCTCACCTGAATCA priA 120462 - 118264 - | primosome assembly protein PriA TERM 133 120614 - 120647 + H 90 -11.2 -3.94409 | opp_overlap 120620, overlap 120617 GATATCAAATCCTGT TAACCATCGTTGCT TATTTT ATCAACGATGGTTA TTTATCAATCGTGTG TERM 134 120617 - 120644 + H 79 -8.5 -4.09519 | opp_overlap 120620, overlap 120614 ATCAAATCCTGTTAA CCATCGTTGCT TATTTT ATCAACGATGG TTATTTATCAATCGT rpmE 120715 - 120930 + | 50S ribosomal protein L31 TERM 135 120966 - 120952 - T 100 -12.8 -4.96848 | opp_overlap 120952 CCCGTCAGATAAAAA GGCGCC TTG GGCGCC TTTTTTGTTGCCACT TERM 136 120952 - 120966 + T 100 -12.8 -5.45652 | opp_overlap 120952 CCCGTCAGATAAAAA GGCGCC TTG GGCGCC TTTTTTGTTGCCACT TERM 137 121318 - 121346 + T 79 -3.1 -5.31275 | opp_overlap 121318 TGCGTAAAGAAAAAA TGGCTAAGCACAA TTG TTATGCTGAACCA TTTTTTGTAGTGAAA TERM 138 121346 - 121318 - T 100 -7.5 -5.63517 | opp_overlap 121318 TGCGTAAAGAAAAAA TGGCTAAGCACAA TTG TTATGCTGAACCA TTTTTTGTAGTGAAA TERM 139 121434 - 121399 - T 74 -4.8 -4.74801 | overlap 121382 121381 121401 121405 121418 TAACTGCAGTAAAAA TATTAACTGCAGTGAA AAGG TTAACTGCAGTGAAAA GGTTAACTGCAGTGA TERM 140 121432 - 121401 - T 72 -7.4 -3.98658 | overlap 121382 121381 121399 121405 121418 ACTGCAGTAAAAATA TTAACTGCAGTGAA AAGG TTAACTGCAGTGAA AAGGTTAACTGCAGT TERM 141 121428 - 121405 - T 73 -8.2 -3.62531 | overlap 121382 121381 121401 121399 121418 CAGTAAAAATATTAA CTGCAGTGAA AAGG TTAACTGCAG TGAAAAGGTTAACTG YP_0113 121940 - 121473 - | hypothetical protein YP_0114 121979 - 122140 + | hypothetical protein YP_0115 122305 - 122135 - | hypothetical protein metJ 122594 - 122277 - | transcriptional repressor protein MetJ metC1 122891 - 124132 + | cystathionine gamma-synthase TERM 142 125670 - 125688 + G 84 -10.3 -4.08767 | TTACGATGGTTTGGA TGCCAGC CGGAC GCTGGCA TTTTACAACGATGAA metL 124135 - 126570 + | bifunctional aspartate kinase II/homoserine dehydrogenase II metF 126803 - 127687 + | 5,10-methylenetetrahydrofolate reductase TERM 143 127884 - 127902 + T 77 -11 -2.73735 | overlap 127877 127894 127896 TGCTTTTCTACCTGA GTCCGGTA TTC TGCCGGAC TCATTCCGCCTGTTT tra5A 128650 - 127865 - | IS1661 transposase YP_0121 129348 - 128704 - | IS1661 DNA-binding protein TERM 144 129219 - 129275 + g 73 -10.3 -3.30159 | gap 1, opp_overlap 129224 129229 129250, overlap 129220 129230 AAAAAGGGTGTTTCA TTGAACCGAACCTCCAGATCATGGAT AAAAAG ATCCAAGATCTGG-GGTTCAGTGCAC TTATGGCCCCCTTGG TERM 145 129220 - 129274 + g 78 -13.8 -2.57881 | gap 1, opp_overlap 129224 129229 129250, overlap 129219 129230 AAAAGGGTGTTTCAT TGAACCGAACCTCCAGATCATGGAT AAAAAG ATCCAAGATCTGG-GGTTCAGTGCA CTTATGGCCCCCTTG TERM 146 129270 - 129224 - G 89 -15.4 -3.05384 | gap 1, opp_overlap 129220 129219 129230, overlap 129229 129250 GGGTGTTTCATTGAA CCGAACCTCCAGATCATGGAT AAAAAG ATCCAAGATCTGG-GGTTCAG TGCACTTATGGCCCC TERM 147 129265 - 129229 - G 73 -10.3 -3.19192 | gap 1, opp_overlap 129220 129219 129230, overlap 129224 129250 TTTCATTGAACCGAA CCTCCAGATCATGGAT AAAAAG ATCCAAGATCTGG-GG TTCAGTGCACTTATG TERM 148 129230 - 129265 + g 79 -12.7 -3.08471 | opp_overlap 129229 129224 129250, overlap 129220 129219 TTCATTGAACCGAAC CTCCAGATCATGGAT AAAAAG ATCCAAGATCTGGGG TTCAGTGCACTTATG TERM 149 129260 - 129250 - G 76 -5.4 -4.88736 | opp_overlap 129230 129220 129219, overlap 129229 129224 GATCATGGATAAAAA GATC CAA GATC TGGGGTTCAGTGCAC glpR1 130170 - 129412 - | DNA-binding transcriptional repressor GlpR TERM 150 129925 - 129937 + g 76 -6.2 -4.63218 | overlap 129924 GCTAGCAACGCGTTG GGCG ATCCG CGCC TTTTCTTCCGACCAC glpG 131041 - 130205 - | intramembrane serine protease GlpG glpE 131388 - 131059 - | thiosulfate sulfurtransferase malT 134474 - 131763 - | transcriptional regulator MalT TERM 151 132030 - 132020 - G 78 -4 -5.14163 | overlap 132010 ATTTATCAACAAAAA TTTC GTC GAAA TGCGCGAATTTATGC TERM 152 132127 - 132145 + g 70 -11 -2.55074 | TTGAGTTGGATCAGT TGGCGCAG TTG TTGCGCCA TGGCTTCACCTTCAA malQ 137209 - 139305 + | 4-alpha-glucanotransferase YP_0128 140209 - 139634 - | putative DNA uptake protein comFC 140970 - 140269 - | gluconate periplasmic binding protein TERM 153 140441 - 140479 + g 78 -13.1 -2.90763 | gap 1, overlap 140446 CGCACGTTCTTTCGC CGCTGTGCCGCCGTCAGC TGCT GTTG-CGGCGGCGTTGCG TGTATACGCTGTAGC TERM 154 140446 - 140474 + g 74 -11 -3.16177 | gap 1, overlap 140441 GTTCTTTCGCCGCTG TGCCGCCGTCAGC TGCT GTTG-CGGCGGCG TTGCGTGTATACGCT bioH 141036 - 141833 + | putative biotin biosynthesis protein YP_0131 141994 - 142272 + | hypothetical protein TERM 155 142410 - 142387 - T 76 -11 -2.50966 | opp_overlap 142388, overlap 142378 142386 142384 142382 ACGGAATCAACATAT TGAGATGCCC ATAT GGGCATCTCT TATTGGTGTGCGTGA TERM 156 142388 - 142409 + T 100 -14.5 -3.78034 | opp_overlap 142378 142387 142386 142384 142382 CGGAATCAACATATT GAGATGCCC ATAT GGGCATCTC TTATTGGTGTGCGTG YP_0132 142667 - 142410 - | hypothetical protein TERM 157 142721 - 142707 - R 74 -10 -3.15579 | opp_overlap 142706 CTAATGGGTGATCAA TGGCAG TTG CTGCCA CTACTTCGGCAGCAA feoB 145018 - 142703 - | ferrous iron transport protein B TERM 158 144586 - 144598 + g 80 -4.7 -5.11613 | opp_overlap 144586 ATACCAATGGAATGA CCGGG CAA CCCAG TTTTTTAGATAATGT feoA 145337 - 145110 - | ferrous iron transport protein A TERM 159 145841 - 145786 - R 100 -29.6 -2.90813 | opp_overlap 145791 145828, overlap 145791 TATTTTGTTAAATTA TTAAACTGCCCTCCTCATTATTGGAT ATCA ATCTAATAATGAGGAGGGCAGTTTAA TGGCCGTCCTTGTCA TERM 160 145791 - 145836 + r 100 -27.3 -3.73953 | opp_overlap 145786 145791, overlap 145828 TGTTAAATTATTAAA CTGCCCTCCTCATTATTGGAT ATCA ATCTAATAATGAGGAGGGCAG TTTAATGGCCGTCCT TERM 161 145836 - 145791 - R 100 -25.1 -3.8901 | opp_overlap 145791 145828, overlap 145786 TGTTAAATTATTAAA CTGCCCTCCTCATTATTGGAT ATCA ATCTAATAATGAGGAGGGCAG TTTAATGGCCGTCCT YP_0135 148236 - 145861 - | RNA-binding protein TERM 162 147970 - 147993 + g 73 -5.8 -4.49337 | overlap 147974 TAGGGTGGCGTTGAT CGCCCCGGCC AGCT GGTCGGTGAG TTTTCCTTGATCTTC TERM 163 148070 - 148088 + g 74 -11.8 -2.85351 | TACCCCAGACGGCTT TCCAACTG ACG CAGTTGGA TATCATCTAACCCGC greB 148770 - 149285 + | transcription elongation factor GreB ompR 149421 - 150140 + | osmolarity response regulator envZ 150137 - 151489 + | osmolarity sensor protein TERM 164 151471 - 151485 + T 84 -11.4 -3.14564 | opp_overlap 151475 GGATGTGAAGCCCAA GCCACC AGC GGTGGC TTGATGGAGGGATAA TERM 165 151590 - 151567 - T 100 -6.7 -5.61913 | AATAAATAGAAAAAA GGGGCAC AATTCTGAAA GTGCCCC CTGTAACGCTAAACT pckA 153243 - 151624 - | phosphoenolpyruvate carboxykinase TERM 166 153426 - 153399 - R 100 -13.4 -3.82097 | GTGAAACGGAGGAAA TGGCCGGGCACC AATA GGTACCCGGCTA AGCATTACGAGGATT hslO 154321 - 153440 - | Hsp33-like chaperonin hslR 154891 - 154484 - | heat shock protein 15 YP_0142 155600 - 154920 - | HAD superfamily hydrolase YP_0143 157891 - 155744 - | hypothetical protein TERM 167 156157 - 156144 - G 78 -3.7 -5.14563 | opp_overlap 156146, overlap 156146 CTGGTGATCAAAAAA CCGCC CGGA GGTGG GCTATTCAACGCTTC TERM 168 156488 - 156499 + g 71 -5.8 -4.28597 | opp_overlap 156485 GCTGGCATCAGAGCC CTGC GGGT GCAG TTGTTTATTGATTGT YP_0144 158171 - 158365 + | hypothetical protein TERM 169 158782 - 158792 + G 72 -8.2 -3.89617 | AAGAAGTTGGATATG GCGC TGA GCGC TTTGACTTTCTCGCT nudE 158478 - 159023 + | ADP-ribose diphosphatase NudE TERM 170 159103 - 159126 + T 100 -14 -5.10497 | opp_overlap 159103 TAATTTATAAAAAAA CCAGATGATC ATCA GATCATCTGG TTTTTTAGATAAGTT TERM 171 159126 - 159103 - T 100 -14 -5.66684 | opp_overlap 159103 TAATTTATAAAAAAA CCAGATGATC ATCA GATCATCTGG TTTTTTAGATAAGTT mrcA 161738 - 159159 - | peptidoglycan synthetase TERM 172 160510 - 160523 + g 70 -2.3 -5.00616 | overlap 160506 160504 160511 TGCTGACCAGGCTGA ACGAC ATCA GTCGC TTTTTTGGGGACCGG TERM 173 162270 - 162288 + G 75 -8.8 -3.96327 | TGCAGCAATGGCAAG CCTGCTTG GAA CAGGCGGG TTTATCCTCACAAGT TERM 174 162314 - 162324 + G 72 -8.2 -3.83323 | CAAGTGATTGATATT GCGC CAT GCGC TTTACGTTATATGGC TERM 175 162607 - 162618 + G 71 -7.2 -4.10657 | CACACGGTCTTGGTC GCCG CTAA CGGC TTTTGCGCACTATCA ftsA1 161789 - 162730 + | hypothetical protein YP_0148 162748 - 163335 + | hypothetical protein YP_0149 163283 - 163909 + | hypothetical protein YP_0150 163875 - 164303 + | hypothetical protein YP_0151 164695 - 164306 - | hypothetical protein TERM 176 165693 - 165677 - g 70 -8.7 -3.62418 | ACAAGTTACTGTAAA CGATGGC GAA ACCATCG TGCTGGGCGGGATTT gspD1 164730 - 165854 + | putative outer membrane porin HofQ aroK 166203 - 166724 + | shikimate kinase I aroB 166781 - 167869 + | 3-dehydroquinate synthase damX 168123 - 169112 + | hypothetical protein TERM 177 169278 - 169240 - g 75 -10.2 -3.34398 | opp_overlap 169267, overlap 169238 169241 GGCTGGTGGGAAATA TCCGCTGGTTGATGACAT ACG ACGCCATCTTCCAGCGGG AGATTGTTTGATAGA TERM 178 169277 - 169241 - g 78 -13.7 -2.60496 | opp_overlap 169267, overlap 169240 169238 GCTGGTGGGAAATAT CCGCTGGTTGATGACAT ACG ACGCCATCTTCCAGCGG GAGATTGTTTGATAG TERM 179 169549 - 169572 + G 73 -9 -3.69094 | TCTCAATCGCCACTG TTATAACGGC CTGT GTCGTTATAA TTTGAGTGGTGAATT TERM 180 169636 - 169616 - g 82 -3.9 -5.24129 | GGTCGCTACAAAAAA CCCTACTTC CCA GAAGCGGAG TTATATTGGTTTGCT TERM 181 169658 - 169670 + G 91 -5.5 -5.38054 | opp_overlap 169658 169659, overlap 169652 169659 TGGTTTGCTGAAAAA TCGCA AAA TGCGG TTTTTGTTTGTGAGC dam 169196 - 170011 + | DNA adenine methylase rpe 170302 - 170991 + | ribulose-phosphate 3-epimerase TERM 182 171197 - 171223 + G 70 -8 -3.79882 | overlap 171176 CGTGAACATAATGCT CAGCTTGTGG CACAGAC CCGCGAGCTG TTTGATCACTATTAT gph 170984 - 171682 + | phosphoglycolate phosphatase trpS 171684 - 172724 + | tryptophanyl-tRNA synthetase TERM 183 172769 - 172746 - T 76 -11 -2.53641 | opp_overlap 172747, overlap 172745 CAACGCATCAGTAAT GTGAGGGGGA AATT TCCCCCTCAT TAATCAGCATTAACC TERM 184 172747 - 172768 + T 100 -14.5 -3.16742 | opp_overlap 172746 172745 AACGCATCAGTAATG TGAGGGGGA AATT TCCCCCTCA TTAATCAGCATTAAC cysG 174291 - 172879 - | siroheme synthase nirC 175185 - 174379 - | nitrite transporter NirC nirD 175690 - 175364 - | nitrite reductase small subunit nirB 178233 - 175687 - | nitrite reductase TERM 185 176085 - 176097 + g 80 -10.5 -3.73072 | opp_overlap 176084 176085 CGGCTGCCAGTAAAT CCGCG TGA CGCGG TTTCATGCCGCCGTT TERM 186 178202 - 178217 + g 100 -7.6 -5.50723 | TGGCCGACCATGCCG TTGCCA ATGA TGGCAA TTTTTATTTTGCTCA TERM 187 178727 - 178740 + G 76 -8.1 -4.15222 | ATGCGCAGGGCGGTT TGGCG CTCC CGCCA TTTATTGAGCCGCAT TERM 188 179111 - 179126 + G 89 -10.4 -4.35524 | TGGGTGCGGATGCGG TGGGGG CGAT CCCCCA TTTTGAATTTACCCG codA 178543 - 179853 + | cytosine deaminase TERM 189 179923 - 179895 - T 78 -10.2 -3.2827 | overlap 179897 TTAGTGAATCATCAA TACCCTGCCACC TTGGC GGCGGCAGGGCG GTAACGCAGATAAAT TERM 190 179921 - 179897 - T 100 -15 -3.20494 | overlap 179895 AGTGAATCATCAATA CCCTGCCACC TTGGC GGCGGCAGGG CGGTAACGCAGATAA proP2 181122 - 179938 - | hypothetical protein TERM 191 181873 - 181896 + G 70 -11 -2.68823 | opp_overlap 181860, overlap 181872 181875 AAGTGCCCCGCCAGC CAGTACCGGC CAGT GACGGTACTG ATTATCTGAGGACCA cirA1 181608 - 183668 + | putative membrane receptor protein TERM 192 183714 - 183691 - T 100 -12.4 -3.40899 | opp_overlap 183691 AATGCGCTAGCAGAA CGTGGCAGGC GATG GCTTGCCACG TTAATAACAATTAAT TERM 193 183691 - 183714 + T 100 -14.6 -3.16921 | opp_overlap 183691 AATGCGCTAGCAGAA CGTGGCAGGC GATG GCTTGCCACG TTAATAACAATTAAT purR2 184743 - 183757 - | LacI family transcriptional regulator TERM 194 184419 - 184434 + g 71 -7.6 -4.10179 | AGTTATACAGCCGCT GAATGG CTAA CCATTC TTTATCTGCATTATC TERM 195 184548 - 184528 - G 74 -2.4 -5.18357 | overlap 184529 TAAGGCACCAAAAAA GCCCCCTC GGTAT GAGGTGGT CACCAACCCCAGCGT TERM 196 186331 - 186321 - H 71 -8.2 -3.53811 | TGTAGGGGCTCCAAA CGGC TCT GCCG GCGATAAAGTTCAGT TERM 197 186395 - 186427 + H 86 -12.2 -3.00498 | gap 1, opp_overlap 186394 186393 186397, overlap 186397 186399 ATCTGTGGATAAATT CAGGCTCACCATGAT TTTC ATCA-GGTGAGTCTG TCTCTGTACGGTCTC TERM 198 186512 - 186499 - H 84 -5.3 -5.35224 | opp_overlap 186499 TGCAGAAAAACAAAA TGAGA GCGC TCTCA TTTGAAGCAGATTAG TERM 199 186602 - 186634 + H 81 -11.3 -2.8194 | opp_overlap 186598, overlap 186594 AGTAAGAGAATCGTG ATCCAGACTCCAGAA TCT TGCTGGAGTCTGGGA TGTGGTGACTCATTA ppiA 186791 - 187390 + | peptidyl-prolyl cis-trans isomerase A (rotamase A) YP_0170 187716 - 189257 + | hypothetical protein pabA 189500 - 190075 + | para-aminobenzoate synthase component II TERM 200 190111 - 190128 + F 76 -2.7 -5.30686 | CCATGACATCATTTA TCATTTG CTTG CGGATGA TTTTTTATGCATATT argD 190196 - 191425 + | bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein TERM 201 191551 - 191525 - T 84 -10.1 -3.82218 | gap 1, opp_overlap 191534, overlap 191526 191541 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 202 191552 - 191526 - T 72 -10.1 -2.88849 | gap 1, opp_overlap 191534, overlap 191525 191541 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT YP_0173 193771 - 191651 - | hypothetical protein TERM 203 192209 - 192221 + g 71 -5.5 -4.58395 | opp_overlap 192202 CTGATAAGCCTCCAG TGCCT GAT GGGCA TTTTTACGCAATAAC TERM 204 193183 - 193195 + g 73 -5.5 -4.66833 | GTTGTCTATCGAGTA GCGGT GGT ATCGC TTTTTCGGGTTCAAG TERM 205 193843 - 193813 - R 100 -12.7 -4.75063 | gap 1, opp_overlap 193813 AGAAAACGGGAAAAA CCGGCGCTAATAGC TTCA GCT-TTAACGCCGG TTTTTAGAGGGAATT TERM 206 193813 - 193843 + r 100 -10.5 -4.57341 | gap 1, opp_overlap 193813 AGAAAACGGGAAAAA CCGGCGCTAATAGC TTCA GCT-TTAACGCCGG TTTTTAGAGGGAATT crp 194489 - 193857 - | cAMP-regulatory protein TERM 207 193893 - 193921 + g 78 -6.2 -4.8048 | gap 2 GATCGTTTTACCGTG TGC-GG-AGATCAA GTT TTGATCTTCCAGCA TTTTTAGTATCCGCC YP_0175 194825 - 195232 + | hypothetical protein TERM 208 195244 - 195267 + F 93 -8.9 -4.56775 | opp_overlap 195235 195234 195244 GTAAATGGTGAACCA CCCATAGCC CGGTTT GGTTATGGG TTTTTAGGCCAAAAT TERM 209 195369 - 195399 + G 100 -8.3 -5.3167 | overlap 195362 AATATCGGTTGCCTG TGGGGCGATATCA TTGTT TGTTGTCGCCTCA TTTTCTTTGTTTTTC proP3 195304 - 195735 + | major facilitator superfamily permease prk 196818 - 195913 - | phosphoribulokinase 1 TERM 210 196097 - 196061 - G 75 -8.7 -3.90038 | overlap 196095 AGCAAATAAGGGAAA TCGATGTGATCCAAACC ACG GAAATGGATCACAACGA AACTTTCGTCTAACG TERM 211 196439 - 196407 - G 72 -4 -4.84311 | gap 1, overlap 196409 CTTCATAGAATAAAA CATCCGTGGGTTCCG GTAG CGGCTCCCAAGGA-G TAAAGGTGCCAGGGA TERM 212 196438 - 196409 - G 71 -7.7 -4.03793 | overlap 196407 TCATAGAATAAAACA TCCGTGGGTTCCG GTAG CGGCTCCCAAGGA GTAAAGGTGCCAGGG YP_0178 197167 - 196931 - | hypothetical protein YP_0179 198144 - 197164 - | putative hydrolase TERM 213 197957 - 197933 - G 71 -5 -4.58283 | opp_overlap 197955, overlap 197935 197955 TAAGGGCTGTAAAAA TTCCCTTCCA AACCG TGGAAGAGCA CCACTCGGGGCTTCT rhtB1 198270 - 198848 + | putative threonine efflux protein TERM 214 198925 - 198963 + F 83 -12.1 -2.74597 | opp_overlap 198932, overlap 198928 198932 198933 AGTACATCTGTTATC GCATAAAGGAATAAA CAATATTCT TTTATTCCTTTATGC TGCTCTCTCTCTCGG tauA 199051 - 200109 + | taurine transporter substrate binding subunit TERM 215 200447 - 200427 - g 77 -9 -4.0274 | gap 1 GGGATGAGTAAAGAA CAGCGGCGG GTAA CCGCC-CTG AAAATGCTAAACCGG tauB 200118 - 200885 + | taurine transporter ATP-binding subunit TERM 216 201450 - 201464 + G 79 -7 -4.64846 | overlap 201448 CCCGTGCATTAGGTG CCAGCC GTT GGCAGG TTTTATGGTTTGTGG tauC1 200882 - 201736 + | taurine transporter subunit tauD 201733 - 202581 + | taurine dioxygenase wcaA 204642 - 203653 - | putative glycosyl transferase TERM 217 204692 - 204725 + r 73 -9.7 -3.04263 | opp_overlap 204682 204685, overlap 204694 AAAATCACGCCGCTC TAGTCGTGCGACT CTAACTCA ATTCGCACGACTA TATTCACGATGCCAT uup1 206699 - 204777 - | putative ABC transporter ATP-binding protein TERM 218 205015 - 205027 + g 70 -9.1 -3.65199 | opp_overlap 205008 205007 GTCATAATCTGCTTA CGCAG TGG CTGCG TTTGAGTGCGGAATT TERM 219 206369 - 206385 + g 100 -6.5 -5.63103 | overlap 206370 TACCGTGCACGGTTG CGATGGC ATG GCCATCA TTTTTTTCATTGGCA TERM 220 206370 - 206384 + g 80 -10 -3.96777 | overlap 206369 ACCGTGCACGGTTGC GATGGC ATG GCCATC ATTTTTTTCATTGGC mdaB1 206947 - 207498 + | glutathione-regulated potassium-efflux system ancillary protein KefG kefB 207502 - 209310 + | glutathione-regulated potassium-efflux system protein KefB YP_0190 209326 - 209547 + | nucleic acid-binding protein TERM 221 209668 - 209657 - g 74 -4.4 -4.85545 | ATGAAAGTAACAAAA GACT TGGT AGTC AGCCTGGCTTACCAG slyD 209609 - 210223 + | FKBP-type peptidyl-prolyl cis-trans isomerase TERM 222 210239 - 210271 + G 95 -16.5 -2.87931 | opp_overlap 210226 210246, overlap 210246 TATCTGACCCCGTCA GCAAAAAGCCAGC CTTCATC GCTGGCTTTTTGC TCTGTACGCGATCAC TERM 223 210264 - 210246 - g 82 -7.4 -4.72272 | opp_overlap 210246 210239 CCCCGTCAGCAAAAA GCCAGC CTTCATC GCTGGC TTTTTGCTCTGTACG TERM 224 210246 - 210264 + G 85 -7.4 -4.84527 | opp_overlap 210246, overlap 210239 CCCCGTCAGCAAAAA GCCAGC CTTCATC GCTGGC TTTTTGCTCTGTACG proP4 210208 - 210408 + | major facilitator superfamily permease slyX 210662 - 210444 - | hypothetical protein TERM 225 211615 - 211601 - g 83 -2.8 -5.41359 | opp_overlap 211601, overlap 211603 AAGCAAATCAAAAAA GGTG GCAAAAT CACC TTGGTTATCCCGCCA fkpA 210938 - 211777 + | FKBP-type peptidyl-prolyl cis-trans isomerase TERM 226 211808 - 211831 + F 100 -9.6 -6.22802 | opp_overlap 211808 ACACTCTTCTCATAA CCGTTACGAT AATT GTCGTGACGG TTTTTTTTTGTGCGC YP_0195 212019 - 212753 + | putative DNA-binding protein dsrE1 212753 - 213148 + | hypothetical protein TERM 227 213331 - 213320 - g 80 -3 -5.30686 | overlap 213309 AACAGCCAGAAAAAA TTCT TGCC AGAA ACTATATTGCTACTT dsrF 213148 - 213513 + | hypothetical protein dsrH 213533 - 213820 + | tRNA 2-thiouridine synthesizing protein B rpsL 213958 - 214332 + | 30S ribosomal protein S12 rpsG 214429 - 214899 + | 30S ribosomal protein S7 fusA 214993 - 217101 + | elongation factor G TERM 228 217158 - 217124 - f 72 -9.3 -3.10579 | overlap 217121 GGTTTAAAACAATGA TCCAGTGCTCTCTCA TTTAG TGGGAGAGCACAAGA GTAAGGAATATAGTC tuf 217174 - 218358 + | elongation factor Tu TERM 229 218408 - 218393 - f 91 -10.4 -4.10953 | opp_overlap 218393 ATTGATCAAACCAAA GGGTGC CTCG GCACCC TTTTTTATTGTGCCC TERM 230 218393 - 218408 + F 100 -10.4 -5.55769 | opp_overlap 218393 ATTGATCAAACCAAA GGGTGC CTCG GCACCC TTTTTTATTGTGCCC TERM 231 218430 - 218448 + F 100 -16 -3.07307 | opp_overlap 218430 ATTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC TERM 232 218448 - 218430 - f 100 -16 -4.37092 | opp_overlap 218430 ATTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC tnp_3 218510 - 219019 + | transposase for the IS1541 insertion element TERM 233 219097 - 219121 + F 93 -9.9 -4.25056 | opp_overlap 219100, overlap 219099 219100 ATAGGCGCATATGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTGATAAAGTG TERM 234 219099 - 219119 + F 100 -12.5 -3.72374 | opp_overlap 219100, overlap 219097 219100 AGGCGCATATGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTGATAAAG TERM 235 219100 - 219118 + F 100 -16 -2.82942 | opp_overlap 219100, overlap 219099 219097 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTGATAAA TERM 236 219118 - 219100 - f 100 -16 -4.8048 | opp_overlap 219100 219099 219097 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTGATAAA bfd 219207 - 219401 + | bacterioferritin-associated ferredoxin bfr 219480 - 219953 + | bacterioferritin, iron storage and detoxification protein rpsJ 220367 - 220678 + | 30S ribosomal protein S10 rplC 220711 - 221340 + | 50S ribosomal protein L3 TERM 237 221389 - 221377 - g 77 -10.5 -3.54414 | opp_overlap 221371, overlap 221375 ATTGGTAATGAAAGA CGCGC CAG GCGCG CTGACTGTTTCCGAA rplD 221357 - 221962 + | 50S ribosomal protein L4 TERM 238 222243 - 222223 - g 74 -9.7 -3.57462 | opp_overlap 222226, overlap 222226 TACGTCACCCTGAAA GAAGGCCAG AAT CTGGACTTC ATCGGCGGCGCAGAG rplW 221959 - 222261 + | 50S ribosomal protein L23 rplB 222278 - 223102 + | 50S ribosomal protein L2 rpsS 223117 - 223395 + | 30S ribosomal protein S19 rplV 223410 - 223742 + | 50S ribosomal protein L22 TERM 239 223906 - 223874 - g 74 -10 -3.61654 | overlap 223875 GACAGCGACTTTAAA GTTCGCCAATTCCT GACTA AGGAATTAGCGAAA GCTTCCGTTTCTCGC TERM 240 223905 - 223875 - g 79 -13.5 -2.76671 | overlap 223874 ACAGCGACTTTAAAG TTCGCCAATTCCT GACTA AGGAATTAGCGAA AGCTTCCGTTTCTCG rpsC 223760 - 224458 + | 30S ribosomal protein S3 rplP 224471 - 224881 + | 50S ribosomal protein L16 rpmC 224881 - 225072 + | 50S ribosomal protein L29 rpsQ 225072 - 225326 + | 30S ribosomal protein S17 TERM 241 225376 - 225350 - f 70 -8 -3.69069 | opp_overlap 225350, overlap 225353 CCAACTCGAACATAA TAAGCGGCTC TGAAAAT GGGCCGCTTA TTTTTTCTACCCACT TERM 242 225350 - 225376 + F 100 -10.2 -5.24531 | opp_overlap 225350 225353 CCAACTCGAACATAA TAAGCGGCTC TGAAAAT GGGCCGCTTA TTTTTTCTACCCACT rplN 225507 - 225878 + | 50S ribosomal protein L14 rplX 225889 - 226203 + | 50S ribosomal protein L24 TERM 243 226380 - 226362 - g 76 -7.4 -4.30987 | opp_overlap 226361, overlap 226348 ATCGCTGACAAGAAA CTGCTGGA TAA TGCAGCAG CTGACTTGGCAGCAA rplE 226218 - 226757 + | 50S ribosomal protein L5 TERM 244 226813 - 226792 - g 77 -8.7 -4.02021 | overlap 226793 226795 AAGCAATCAATGAAA GCACGCGAA GTTG TTCGCGTGA AACTAGCTAACAAAT TERM 245 226812 - 226793 - g 76 -12.2 -3.00128 | overlap 226792 226795 AGCAATCAATGAAAG CACGCGAA GTTG TTCGCGTG AAACTAGCTAACAAA rpsN 226771 - 227076 + | 30S ribosomal protein S14 rpsH 227110 - 227502 + | 30S ribosomal protein S8 rplF 227517 - 228050 + | 50S ribosomal protein L6 rplR 228060 - 228413 + | 50S ribosomal protein L18 TERM 246 228634 - 228614 - g 70 -4.6 -4.67353 | opp_overlap 228626, overlap 228626 GCAGCGATCCAAAAA GCGATGGA AAAAG CCCGTCGC GCTATGATTAACGTT rpsE 228428 - 228931 + | 30S ribosomal protein S5 rpmD 228934 - 229113 + | 50S ribosomal protein L30 rplO 229117 - 229551 + | 50S ribosomal protein L15 TERM 247 229993 - 230022 + G 79 -7.9 -4.45168 | overlap 229985 GAATATGCCTGGGAT GCAAGGTCTGG TAATCAAT CCAGGCTTTGC TTTCTATTTTACCGC secY 229559 - 230890 + | preprotein translocase subunit SecY rpmJ 230924 - 231040 + | 50S ribosomal protein L36 TERM 248 231071 - 231100 + F 100 -12.3 -4.61868 | gap 1 TTTCTTGCAAAGTTG GGTTGAGCTGGCTA GAT TAGCCAGC-CAATC TTTTGTATGTGACTG rpsM 231188 - 231544 + | 30S ribosomal protein S13 rpsK 231561 - 231950 + | 30S ribosomal protein S11 TERM 249 231940 - 231956 + F 82 -7.9 -4.42851 | opp_overlap 231940 231939 GTCCGCCGAAAAAGC GCCGCGT ATA ACGCTGC TTTTAGGTTTGTTGG rpsD 231981 - 232601 + | 30S ribosomal protein S4 TERM 250 232586 - 232604 + F 77 -10.4 -3.14132 | ACACCTGATCGTCGA GCTTTACT CCA AGTAAAGC TTAGTACCAAAGAGA TERM 251 233533 - 233521 - g 73 -3.4 -5.01732 | AACCTGGGTAAAAAA TCTC TTACT GAGA TTAAAGACGTGCTCG rpoA 232627 - 233616 + | DNA-directed RNA polymerase subunit alpha TERM 252 233706 - 233734 + G 77 -10.4 -3.57246 | gap 1, overlap 233702 233704 GTAACAGCAGCCATC GCCAGGCTATGTT CCGT AACATGGCC-GGC TCTTTGGTTCGTCAT TERM 253 233928 - 233902 - g 71 -11.4 -2.73123 | opp_overlap 233899 233927 AAAACTGTTTAACGA GCTAGGCCCGCG TTT CGCGAGCCGCGC CGGTGGTTACACTCG rplQ 233657 - 234046 + | 50S ribosomal protein L17 TERM 254 234092 - 234055 - f 100 -20.1 -3.62032 | opp_overlap 234067, overlap 234056 234067 AGAGTAATCTGTAAA CGCGTAAAAAAACCGGG CTTG CCCGGTTTTTTTACGCC CACCATATACAGCTT TERM 255 234091 - 234056 - f 100 -23.6 -2.76737 | opp_overlap 234067, overlap 234055 234067 GAGTAATCTGTAAAC GCGTAAAAAAACCGGG CTTG CCCGGTTTTTTTACGC CCACCATATACAGCT TERM 256 234067 - 234080 + F 100 -9.5 -5.40072 | opp_overlap 234067 234056 234055 AAACGCGTAAAAAAA CCGGG CTTG CCCGG TTTTTTTACGCCCAC TERM 257 234080 - 234067 - f 100 -9.5 -5.4477 | opp_overlap 234067, overlap 234056 234055 AAACGCGTAAAAAAA CCGGG CTTG CCCGG TTTTTTTACGCCCAC zntR 234493 - 234918 + | zinc-responsive transcriptional regulator TERM 258 235158 - 235203 + G 100 -17.1 -2.90615 | opp_overlap 235155 235156, overlap 235161 AAAAGGTAGTAACTG GGAGGCCAGTGGTAAGCAATC AATA GATTTTTTACTACTGGCCTTC TGATTTAAAAGAAAT TERM 259 235161 - 235200 + G 91 -15.2 -3.60151 | opp_overlap 235155 235156, overlap 235158 AGGTAGTAACTGGGA GGCCAGTGGTAAGCAATC AATA GATTTTTTACTACTGGCC TTCTGATTTAAAAGA YP_0235 235006 - 235206 + | hypothetical protein mscL 235738 - 235316 - | large-conductance mechanosensitive channel TERM 260 235493 - 235479 - G 74 -3.6 -4.95547 | GCTACAATAACAAAA TCAAAA ATG CTTTGA ATAAATGTACCATAA trkA 237244 - 235868 - | potassium transporter peripheral membrane component TERM 261 236249 - 236269 + g 74 -3.9 -5.00884 | ATCGACGTAAGCACT GCGTTGG ATAAGTA CCATCGC TTTTTTCGCACCCAT sun 238589 - 237300 - | 16S rRNA methyltransferase B TERM 262 237337 - 237357 + g 76 -5.3 -4.86731 | opp_overlap 237332 TAGAAGAAACCATCA CCGTCCTCA GGA TGTGGAAGG TTTTGTTTACCAGGC TERM 263 238615 - 238600 - R 89 -6.8 -5.32944 | TTCATAACCAAAAAA GCTGAC AAAC GCCAGC AAATAAAGGGAGAAG fmt 239630 - 238683 - | methionyl-tRNA formyltransferase TERM 264 239151 - 239167 + g 79 -8.1 -4.37886 | ACTGGTATCTTCTGG TTGAATG GCA CATTCAA TTTTATGCAGCATAG TERM 265 239585 - 239561 - G 89 -15 -3.17622 | overlap 239565 TATGTTGAGAAGAGA GCAACGCGCC TAAAT GGCGCGCTGC AAAATCAGGAGTTCC TERM 266 239581 - 239565 - G 75 -10.8 -3.40191 | overlap 239561 TTGAGAAGAGAGCAA CGCGCC TAAAT GGCGCG CTGCAAAATCAGGAG def 240167 - 239655 - | peptide deformylase TERM 267 240977 - 240999 + GH 72 -7.1 -3.91084 | gap 1, overlap 240980 GCTGTGTTAGTCGTT GAGGCCACTT TAAA AAGTGGC-TC TTTGATTACCGCTCG TERM 268 240980 - 240997 + GH 78 -9.9 -3.54414 | overlap 240977 GTGTTAGTCGTTGAG GCCACTT TAAA AAGTGGC TCTTTGATTACCGCT smf 240302 - 241423 + | hypothetical protein smg 241395 - 241868 + | hypothetical protein topA1 241888 - 242448 + | putative DNA topoisomerase TERM 269 242947 - 242964 + G 73 -9.1 -3.67792 | overlap 242931 ATTACCGGTGTTATC CGGTCAC GTTG GTGGCCG TTTGAATCCATCTGA sUA5A 242450 - 243022 + | putative ribosome maturation factor aroE 243031 - 243852 + | shikimate 5-dehydrogenase paaY 244449 - 243907 - | putative transferase TERM 270 248360 - 248342 - H 82 -10.3 -3.57798 | overlap 248355 CATAAGTAACGATAA TGCGGGT GAAAA ACCCGCA CGCCGGAAGACCAAG TERM 271 248867 - 248856 - H 74 -4.4 -5.06816 | ACTGTTTAATAAAAA CACA GCAC TGTG CAAACACGAAAGTGG TERM 272 249979 - 249989 + H 74 -6.8 -4.27316 | opp_overlap 249979 GGCTTAACCTTACAA CACC GAA GGTG TTTTGAATTGAGAGA TERM 273 250244 - 250210 - H 95 -9.2 -4.50627 | opp_overlap 250217 CAGGCATCAAATAAA GCCAAGACCCCATGCC CAA AGCGTGGGGTTTTTGC TGTGCGCGAAACACA TERM 274 250217 - 250237 + H 100 -10.4 -4.8048 | opp_overlap 250210 CAAATAAAGCCAAGA CCCCATGC CCAAA GCGTGGGG TTTTTGCTGTGCGCG TERM 275 250303 - 250283 - H 71 -8.9 -3.35679 | opp_overlap 250283 GCGTTGTACTGATAA CCCCATGCC CAA AGCGTGGGG TTTTTGCTGTGTGCG TERM 276 250283 - 250303 + H 100 -10.4 -4.84527 | opp_overlap 250283 GCGTTGTACTGATAA CCCCATGC CCAAA GCGTGGGG TTTTTGCTGTGTGCG TERM 277 250369 - 250349 - H 71 -8.9 -3.28712 | opp_overlap 250349 GCGTTGTGCTGATAA CCCCATGCC AAA AGCGTGGGG TTTTTGCTGTGTACG TERM 278 250349 - 250369 + H 100 -10.4 -4.84527 | opp_overlap 250349 GCGTTGTGCTGATAA CCCCATGC CAAAA GCGTGGGG TTTTTGCTGTGTACG YP_0247 250666 - 250932 + | putative transposase tra5B 250956 - 251765 + | putative transposase TERM 279 251786 - 251805 + T 79 -7.8 -4.31859 | overlap 251785 251782 CCTGGTACGGATATT GGGGAGGG ATCA TCCTCTCC TTATTATTTTGTTCG dnaC_3 253211 - 252429 - | transposase/IS protein TERM 280 253127 - 253141 + g 77 -11.4 -3.3506 | overlap 253140 CTGCCTGTTGTGACA GCGCAG GCG CTGCGC TTATAAGGCTTTCCA YP_0250 254230 - 253208 - | transposase for insertion sequence IS100 TERM 281 254252 - 254234 - H 100 -13.2 -4.01078 | AAAAGTGACCATAAA CTCTCCTG AAT CAGGAGAG CAGATTACCCCCTGG tnp_4 254322 - 254780 + | transposase for the IS1541 insertion element TERM 282 254858 - 254882 + T 88 -9.9 -4.15222 | opp_overlap 254861, overlap 254860 254861 ATAGGCGCATATGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTAAAACACAT TERM 283 254860 - 254880 + T 100 -12.5 -3.6761 | opp_overlap 254861, overlap 254858 254861 AGGCGCATATGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTAAAACAC TERM 284 254879 - 254861 - T 100 -16 -4.8048 | opp_overlap 254860 254858 254861 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTAAAACA TERM 285 254861 - 254879 + T 100 -16 -2.80244 | opp_overlap 254861, overlap 254860 254858 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTAAAACA YP_0252 255176 - 254970 - | zinc-binding protein TERM 286 255120 - 255097 - G 76 -3.1 -5.06414 | CGCTTGCAACAAAAA GGGCGAAAA GGGCTT TGTTCACCC CAGATAACGACTTTT YP_0253 256114 - 255362 - | hypothetical protein coaE 256731 - 256111 - | dephospho-CoA kinase YP_0255 256986 - 256741 - | hypothetical protein guaC 257026 - 258069 + | guanosine 5'-monophosphate oxidoreductase hofC 259711 - 258512 - | type IV pilin biogenesis protein hofB 261264 - 259708 - | hypothetical protein TERM 287 260983 - 260962 - GR 71 -8.7 -3.28712 | opp_overlap 260962 260965, overlap 260965 TCCCTTTTGGGATAA CAACGCGCT ATTT AGCCCGTTG TTAATACTACTGTTT TERM 288 260962 - 260983 + gr 71 -8.7 -3.25304 | opp_overlap 260962 260965, overlap 260965 TCCCTTTTGGGATAA CAACGCGCT ATTT AGCCCGTTG TTAATACTACTGTTT ppdD 261703 - 261239 - | putative major pilin subunit TERM 289 261733 - 261745 + r 79 -3.3 -5.30155 | overlap 261734 TGTTTAAGAAACTGG AGGCA GGG TGCCG TTTTTTAATTCATAC nadC 262814 - 261906 - | quinolinate phosphoribosyltransferase ampD1 262927 - 263478 + | N-acetyl-anhydromuranmyl-L-alanine amidase TERM 290 263918 - 263940 + G 74 -3.5 -4.94058 | overlap 263920 263934 GGTGCTGGTTTGGGG GATTTTGCA ATTAG TGCAAAATA TTTTGTTTGGCTTCC ampE 263751 - 264605 + | regulatory protein AmpE TERM 291 264963 - 265002 + T 100 -14.4 -3.09208 | gap 1, opp_overlap 264968 CCATAGGTACTTTGT CAATAGCCTAGGCCAGCAC TAA GTGCTGGCCTAGG-TAGGG TTAACTAGCTGATTT TERM 292 264998 - 264968 - T 100 -19.8 -3.02511 | opp_overlap 264963 GGTACTTTGTCAATA GCCTAGGCCAGCAC TAA GTGCTGGCCTAGGT AGGGTTAACTAGCTG aroP1 266438 - 265038 - | aromatic amino acid transport protein TERM 293 265957 - 265937 - G 74 -4.7 -4.88405 | opp_overlap 265937 265940, overlap 265932 265949 AACCGCCAAATAAAA TCATCGCAA TAA TCGCGATCA CTTTAATGATGGCAA TERM 294 266231 - 266196 - G 70 -8.4 -3.72141 | gap 1, opp_overlap 266209 ATATTTATACGCAAA GTGGCTAAAGGAACCGG CTA CAGGTTC-TTCAACCAC CATTTCGCCTAGCTG TERM 295 266984 - 267010 + H 71 -6.8 -4.08689 | overlap 266980 TTAGTTAAGTGTGAA TTTAAATTCAAA AAA TATGAATTTAAA TTTAATTATTAAATG TERM 296 267337 - 267360 + G 72 -9.6 -3.36273 | opp_overlap 267341 CCCAAACTATCAGAT GTAATCGAGC AGCA GCTCGAATAC TTGATCTTGGAAGGG pdhR 267298 - 268062 + | transcriptional regulator PdhR aceE 268258 - 270921 + | pyruvate dehydrogenase subunit E1 TERM 297 271235 - 271202 - g 100 -6.6 -5.25772 | gap 1 AAAGCAGAAGAAAAA CCGGCGGCGCCTGCT CAGGT AGC-GGCTCCGGCAG CCTCTGCGGCGAAAA aceF 270935 - 272464 + | dihydrolipoamide acetyltransferase TERM 298 272469 - 272493 + F 100 -17.2 -3.54743 | opp_overlap 272465, overlap 272448 272456 272472 TGGTGATGTAATCGC CAAGGCCGGC TTCGT GCCGGCCTTG TTGTGGTTACTGCTC TERM 299 272472 - 272490 + F 100 -13.1 -3.90241 | opp_overlap 272465, overlap 272448 272469 272456 TGATGTAATCGCCAA GGCCGGC TTCGT GCCGGCC TTGTTGTGGTTACTG YP_0267 272482 - 272643 + | hypothetical protein TERM 300 273681 - 273691 + G 76 -5.4 -4.81551 | opp_overlap 273671 273681 GCAACTGCGCACCAA TGTG CCA CACA TTTTTGCTATCGGTG lpdA 272767 - 274194 + | dihydrolipoamide dehydrogenase TERM 301 274285 - 274266 - f 83 -9.2 -4.02396 | opp_overlap 274266 TAAATAAAAGTGAAA CGGTCCCT ACAT AGGGGCCG TTTTTTTTGTGCCCA TERM 302 274266 - 274285 + F 100 -11.4 -5.93809 | opp_overlap 274266 TAAATAAAAGTGAAA CGGTCCCT ACAT AGGGGCCG TTTTTTTTGTGCCCA TERM 303 274306 - 274324 + F 100 -16 -3.07307 | opp_overlap 274306 TTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC TERM 304 274324 - 274306 - f 100 -16 -4.36914 | opp_overlap 274306 TTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC tnp_5 274386 - 274895 + | transposase for the IS1541 insertion element TERM 305 274969 - 275001 + F 100 -11.3 -4.16943 | opp_overlap 274976, overlap 274973 274975 274976 CCTTATAGGCGCATA TGAAAAACCTCCGGC TAT GCCGGAGGATATTTA TTTTAGCCTATACGC TERM 306 274973 - 274997 + F 100 -9.9 -4.67651 | opp_overlap 274976, overlap 274969 274975 274976 ATAGGCGCATATGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTTTAGCCTAT TERM 307 274975 - 274995 + F 100 -12.5 -3.94471 | opp_overlap 274976, overlap 274973 274969 274976 AGGCGCATATGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTTTAGCCT TERM 308 274976 - 274994 + F 100 -16 -2.95598 | opp_overlap 274976, overlap 274975 274973 274969 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTTAGCC TERM 309 274994 - 274976 - f 100 -16 -4.8048 | opp_overlap 274976 274975 274973 274969 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTTAGCC TERM 310 275587 - 275572 - g 100 -6.8 -5.2189 | overlap 275574 TGAATCATTAAAAAA TCCGCC TGCG GGCGAA GAAGAATTCCTATTA TERM 311 275864 - 275848 - g 70 -9.5 -3.30124 | GCTGATGTTCGATAA CTTCTAC GAC GTAGAAG ATAAAGCCAAAGCTG TERM 312 275881 - 275870 - g 71 -5.8 -4.28188 | GACGTAGAAGATAAA GCCA AAGC TGGC AATCCGTATGCAAAA acnB 275465 - 278062 + | bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase TERM 313 278115 - 278135 + F 100 -16.1 -4.45168 | opp_overlap 278115, overlap 278133 TCGCATCAGCTAAAA CGGGGGGCC ATT GGCCTCCCG TTTCTATTTTAAAAA TERM 314 278135 - 278115 - f 100 -13.9 -4.21194 | opp_overlap 278115 278133 TCGCATCAGCTAAAA CGGGGGGCC ATT GGCCTCCCG TTTCTATTTTAAAAA YP_0271 278361 - 278720 + | hypothetical protein rhaT1 279739 - 278831 - | hypothetical protein TERM 315 278981 - 279004 + g 86 -5.2 -5.27477 | gap 1, opp_overlap 278980 CGTGAAATAGGATAG GGCCGCGACCA GTG TGG-CGTTGCC TTTTTTCATTGCGCT TERM 316 279195 - 279179 - G 82 -7.9 -4.7373 | opp_overlap 279187 GCAGGCGATTAAAAA CAGTGGC AGC GCCCCTG GCCCTTGGCTATATA TERM 317 280103 - 280124 + r 89 -10.2 -3.94746 | GACGAGCCGTTTTTA GGTGATCG CCTGAA CGATCACC TTTAATTCCGTATCA speD 280971 - 280177 - | S-adenosylmethionine decarboxylase speE 281939 - 281049 - | spermidine synthase TERM 318 281841 - 281851 + g 73 -3.2 -5.00616 | opp_overlap 281832 281831 AAAAATCACCAGGTC CTGA TGC TCGG TTTTTTCGCGGAACA YP_0275 282403 - 282056 - | hypothetical protein sufI1 282720 - 284321 + | multicopper oxidase TERM 319 284326 - 284349 + F 100 -18.2 -5.24129 | TCAGCGCCTGAGCCA CACCCCGGTC GGTT GACCGGGGTG TTTTTTATAAAACCG hpt 284541 - 285077 + | hypoxanthine phosphoribosyltransferase cynT1 286106 - 285231 - | putative carbonic anhdrase TERM 320 285360 - 285374 + g 79 -7.8 -4.57341 | opp_overlap 285349 AATACCATATACCCA GCCGTG GAT CATGGC TTTTTGCCCGCGCTT ccmA1 286129 - 287055 + | putative ABC transporter, ATP-binding protein YP_0280 287052 - 287822 + | putative ABC transporter, integral membrane protein TERM 321 288353 - 288341 - T 95 -3.4 -6.04378 | AAAGCACAAAAAAAA CAAC GACAT GTTG GGCGATTTAAATAAG panD 289872 - 289492 - | aspartate alpha-decarboxylase TERM 322 290158 - 290176 + r 78 -10.3 -3.2963 | GCTCATCGGCGGTCA CGGGTTC CGAGC GAACCCG TTATGGGGGAATGCT panC 291137 - 290283 - | pantoate--beta-alanine ligase TERM 323 290989 - 290975 - G 76 -2.8 -5.1356 | opp_overlap 290987, overlap 290977 GCGGATTAACAAAAA TAGTCA CCA CGACCA CGTCAGCGCGGGTTT panB 292022 - 291225 - | 3-methyl-2-oxobutanoate hydroxymethyltransferase folK 292770 - 292291 - | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase pcnB 294253 - 292778 - | poly(A) polymerase I TERM 324 293342 - 293380 + g 71 -6.7 -4.22948 | opp_overlap 293344 AAAATTACGGGCAAT CAGTGGGAATAGCGGCT GGAAA AGCTGGTATTCGCACAG TTTTAAATAGGTTTT TERM 325 294210 - 294231 + g 76 -5.7 -4.66537 | GGCACTTTATCTTTA CGGGCCTTG TCAT CACGGACCG TTTTGTCTTCGCGGA glnS1 295307 - 294342 - | glutamyl-Q tRNA(Asp) synthetase TERM 326 295517 - 295559 + r 81 -10.7 -3.3676 | gap 1, opp_overlap 295523, overlap 295525 295550 GAAGGGGTCCAACAG T-TCAAACACGGTGCCGGAG AGGG CTCTGGCACCGTGTTACACA TTATGCCGTGTTACA TERM 327 295552 - 295523 - R 100 -17.9 -3.66803 | opp_overlap 295517 295525 295550 GTCCAACAGTTCAAA CACGGTGCCGGAG AGGG CTCTGGCACCGTG TTACACATTATGCCG TERM 328 295525 - 295550 + r 100 -16.9 -3.07233 | opp_overlap 295523, overlap 295517 CCAACAGTTCAAACA CGGTGCCGGAG AGGG CTCTGGCACCG TGTTACACATTATGC dksA1 296042 - 295587 - | DnaK transcriptional regulator DksA sfsA 297087 - 296212 - | sugar fermentation stimulation protein A TERM 329 296648 - 296659 + gr 91 -4.4 -5.53288 | opp_overlap 296648 TTGTAACCAGATAAT TCAG CAAT CTGA TTTTTTTCAATTGCC ligT 297637 - 297062 - | putative 2'-5' RNA ligase hrpB 297678 - 300239 + | ATP-dependent RNA helicase HrpB mrcB 300327 - 302822 + | penicillin-binding protein 1b TERM 330 302845 - 302878 + F 100 -8.7 -5.95539 | overlap 302846 302847 GGTCAATAAAATGTG ACGGCGGGCGTGGTT TACA GACTGCGCCCGCCAA TTTTTTTCTTTGCGC TERM 331 302846 - 302877 + F 100 -12.2 -4.15696 | overlap 302845 302847 GTCAATAAAATGTGA CGGCGGGCGTGGTT TACA GACTGCGCCCGCCA ATTTTTTTCTTTGCG TERM 332 302847 - 302876 + F 100 -15.7 -3.07791 | overlap 302846 302845 TCAATAAAATGTGAC GGCGGGCGTGGTT TACA GACTGCGCCCGCC AATTTTTTTCTTTGC TERM 333 303903 - 303925 + G 76 -3.2 -5.12172 | overlap 303894 303907 GGTATTTTACCGCAC CCGGCTGGCG GTG CGCCGGTAAG TTTTGTTTATTAATG fhuC 303144 - 303938 + | iron-hydroxamate transporter ATP-binding subunit fhuD 303938 - 305026 + | iron-hydroxamate transporter substrate-binding subunit TERM 334 306974 - 306986 + G 76 -3.3 -5.20222 | TATTAGCGACATTTA TCGGG GCG CCCTA TTTTGTTTATTTGCT fhuB 305023 - 307020 + | iron-hydroxamate transporter permease subunit TERM 335 307141 - 307124 - T 80 -9.9 -3.58343 | opp_overlap 307118 307117 GTCAGCAGTCTGAAA TCTCCTC CGGA GAGGAGA TTAGAGGTTATTGAC hemL 308674 - 307394 - | glutamate-1-semialdehyde aminotransferase TERM 336 309601 - 309620 + G 71 -11.4 -2.83522 | opp_overlap 309593, overlap 309600 TTAGCAACCGGTGCA GCCGCAGG GCTG TCTGCGGC ATTTAATGCCCCGCT TERM 337 309798 - 309814 + G 70 -3 -4.78597 | ACTCAGTGATGCTCC GCTAAA CACCC TTTGGC TTTATTTATTATTAG TERM 338 310038 - 310053 + G 71 -7.6 -4.0498 | GGCAGCCGGTAATTT CAGCAT CGGC ATGCTG TTGTTCATTTTTATC eriC1 309055 - 310491 + | chloride channel protein iscA1 310612 - 310971 + | iron-sulfur cluster insertion protein ErpA TERM 339 311194 - 311217 + T 89 -6.6 -5.31275 | opp_overlap 311194 AGCATCGCTAAAAAA CCGCGACCAT GAGA ATGGCAGCGG TTTTTTATGCTCAAA TERM 340 311217 - 311194 - T 100 -8.8 -5.03715 | opp_overlap 311194 AGCATCGCTAAAAAA CCGCGACCAT GAGA ATGGCAGCGG TTTTTTATGCTCAAA YP_0299 311918 - 311256 - | hypothetical protein fecB1 312712 - 311870 - | vitamin B12-transporter protein BtuF mtn 313413 - 312712 - | 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase dgt 313707 - 315227 + | deoxyguanosinetriphosphate triphosphohydrolase gsrA 315425 - 316870 + | serine endoprotease TERM 341 316968 - 316992 + T 100 -9.3 -5.15526 | TTCCATCTAGCTCAA GGGCACAGT TTATCTC GCTGTGCCC TTTTTGGTTTTCTAT barA 319794 - 317029 - | hybrid sensory histidine kinase BarA YP_0305 319905 - 320087 + | hypothetical protein TERM 342 321662 - 321636 - g 73 -5 -4.68994 | ATTATCACTCAAAAA CAGCCAAACCCA AGC CGTGACTGGCTG AATCCTAACCTCGGT TERM 343 322087 - 322105 + G 71 -6 -4.36914 | GTTGCCAGCCGATCC CCGGTGAT CAA ATTATCGG TTTTATCACGCAAGG relA 320238 - 322472 + | GDP/GTP pyrophosphokinase YP_0307 322509 - 322667 + | hypothetical protein mazG 322674 - 323516 + | nucleoside triphosphate pyrophosphohydrolase pyrG 323728 - 325365 + | CTP synthetase TERM 344 325380 - 325403 + F 95 -13.1 -3.02109 | AAATATTTGGTGGTA GGGGGCGGC TGAGAT GTCGCCCCC TCTGTCTGGAGTTTT eno 325446 - 326741 + | phosphopyruvate hydratase TERM 345 326832 - 326807 - f 74 -10.5 -2.67166 | opp_overlap 326813, overlap 326813 AGTTAACTAATTAAT TAAAAACCCGC TTCG GCGGGTTTTTT TATGCGTTGATTTTG TERM 346 326826 - 326813 - f 100 -9.5 -4.93547 | opp_overlap 326813, overlap 326807 CTAATTAATTAAAAA CCCGC TTCG GCGGG TTTTTTTATGCGTTG TERM 347 326813 - 326826 + F 100 -9.5 -5.66684 | opp_overlap 326813 326807 CTAATTAATTAAAAA CCCGC TTCG GCGGG TTTTTTTATGCGTTG sodC 327113 - 327718 + | superoxide dismutase [Cu-Zn] precursor TERM 348 327758 - 327737 - f 86 -10.2 -3.74077 | opp_overlap 327737 TCTGATACAGTTAAA CTGGCTAC CCGAGC GTAGCCAG TTTGGTGGAGGCCGG TERM 349 327737 - 327758 + F 82 -10.2 -3.72576 | opp_overlap 327737 TCTGATACAGTTAAA CTGGCTAC CCGAGC GTAGCCAG TTTGGTGGAGGCCGG TERM 350 327874 - 327891 + G 83 -5.5 -5.13741 | AGGGCGAGGGTTATT TCACTGG CGTT CCAGCGA TTTTTGTTCGCTTGC nrdG1 327822 - 328493 + | hypothetical protein YP_0313 329092 - 328727 - | sulfite reductase, alpha subunit TERM 351 330455 - 330441 - g 71 -6.4 -4.431 | overlap 330443 330444 TATTGACGGACAAAA TATGCC ACT GGCACA GGCGCTGCTCAGTCA cysJ 329479 - 331317 + | sulfite reductase subunit alpha cysI 331317 - 333047 + | sulfite reductase subunit beta TERM 352 333814 - 333794 - T 100 -14.7 -3.14931 | TCTATGGCTCATTAA GAGGGCGCT AAG AGCGCCCCC AGACTGCTGACAAAC TERM 353 333901 - 333875 - T 84 -10.1 -3.82218 | gap 1, opp_overlap 333884, overlap 333876 333891 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 354 333902 - 333876 - T 72 -10.1 -2.88849 | gap 1, opp_overlap 333884, overlap 333875 333891 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT YP_0317 334525 - 334013 - | hypothetical protein TERM 355 334374 - 334392 + g 71 -7.4 -4.11216 | opp_overlap 334374 ATATCGGGGAAATAA CCGTCGAA TCC TTCAACGG TTTTGAAGATGAAAA TERM 356 334392 - 334374 - G 78 -9.6 -3.91984 | opp_overlap 334374 ATATCGGGGAAATAA CCGTCGAA TCC TTCAACGG TTTTGAAGATGAAAA YP_0318 334795 - 334595 - | hypothetical protein TERM 357 334813 - 334841 + H 100 -15.5 -3.1085 | GAACCCCCTGGTGAG CTACTTGTGGGTA TCA TACCTACAAGTAG TATTGAGTCAATTAG TERM 358 334925 - 334905 - g 87 -9.7 -4.37991 | opp_overlap 334904 334900 GAAAAACACGGAAAA GGGCGATCA TAA TGATCGTCC ATGCCTTGAATTTAT YP_0319 334819 - 335085 + | hypothetical protein TERM 359 336340 - 336350 + F 73 -8.2 -3.62096 | AAGTTGTGGCGCAAG CGGG GAT CCCG TTTCAGGTGGTACCG cysD 336814 - 337722 + | sulfate adenylyltransferase subunit 2 TERM 360 338925 - 338914 - gf 70 -7.2 -3.90048 | overlap 338912 TGGCGGGTAAAAAGA CCCG AGCG CGGG TTGAAAACATTCAAT cysN 337734 - 339251 + | sulfate adenylyltransferase subunit 1 cysC 339190 - 339894 + | adenylylsulfate kinase YP_0324 340067 - 340402 + | hypothetical protein ftsB 340716 - 341036 + | cell division protein FtsB ispD 341040 - 341765 + | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ispF 341895 - 342392 + | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase TERM 361 342651 - 342637 - g 86 -11.4 -4.07885 | TATGCGGGGTTAAAA GACCGC CAT GCGGTC ACCGAACAGTGGTTT TERM 362 343368 - 343383 + G 77 -10.4 -3.54129 | TGAGCTGAGTTTCTG GCTCCC TGCG GGGAGC TTTGCGACCAGTGTG truD 342403 - 343452 + | tRNA pseudouridine synthase D TERM 363 343836 - 343851 + G 71 -6.8 -4.21631 | ATTACGATACGGCGG CGGCAG TGAC TTGCCG TTTATTACGTGCGTT surE 343430 - 344194 + | stationary phase survival protein SurE TERM 364 344265 - 344251 - g 76 -11.4 -3.22298 | opp_overlap 344236, overlap 344236 GGTATTCACGATGAA CGCCTG TTA CAGGCG ATCGAAGCGGTACCG TERM 365 344765 - 344780 + G 70 -3.2 -4.76075 | gap 1, overlap 344763 344762 344765 AATACCATATTGAGA CGG-TGG AAG CCGTCCG TTTTGTTCCTCTGGT pcm 344188 - 344814 + | protein-L-isoaspartate O-methyltransferase TERM 366 345470 - 345495 + G 76 -11.9 -3.01712 | opp_overlap 345456 ATGTTGCCATCATCT GGTGCGGTTGT CGCT ACAACAGCACC TGTTACCGCACCAAG nlpD2 344918 - 345919 + | lipoprotein NlpD rpoS 345974 - 346972 + | RNA polymerase sigma factor RpoS TERM 367 347075 - 347102 + T 100 -7.1 -5.66684 | opp_overlap 347075 GATGAAACACAACAA CGGTGAACA GATAGATAAA TGTTCACCG TTTTTTTATGCCTTG TERM 368 347102 - 347075 - T 72 -7.1 -4.05193 | opp_overlap 347075 GATGAAACACAACAA CGGTGAACA GATAGATAAA TGTTCACCG TTTTTTTATGCCTTG mutS 349887 - 347332 - | DNA mismatch repair protein TERM 369 348851 - 348869 + g 75 -8.8 -3.91897 | opp_overlap 348849 ATACGTTCTAAATCG CCCACTTG TCT CAAGGGGG TTTGTAACTCGGCGG TERM 370 350424 - 350406 - R 71 -6.6 -4.18351 | overlap 350410 AAAGCAAATCAGAAA TGAAGGGC ACT GCCCCGCA TCTGAGCTGAAAGAT TERM 371 350420 - 350410 - R 73 -8.2 -3.67022 | overlap 350406 CAAATCAGAAATGAA GGGC ACT GCCC CGCATCTGAGCTGAA rpiB1 351117 - 350662 - | ribose-5-phosphate isomerase B TERM 372 351250 - 351274 + H 80 -10.1 -3.69364 | opp_overlap 351245 351255, overlap 351254 TAAAACCAAGTCTTT CAAAAGATCAC CAT GTGATCATTTG TTATATATATTCAAT TERM 373 351254 - 351270 + H 70 -5.1 -4.45484 | opp_overlap 351245 351255, overlap 351250 ACCAAGTCTTTCAAA AGATCAC CAT GTGATCA TTTGTTATATATATT TERM 374 351269 - 351255 - H 79 -8.6 -4.09739 | opp_overlap 351254 351250, overlap 351245 CCAAGTCTTTCAAAA GATCAC CAT GTGATC ATTTGTTATATATAT tdh2 351567 - 352715 + | putative Zinc-binding dehydrogenase fabG1 352779 - 353549 + | short chain dehydrogenase TERM 375 353668 - 353709 + G 91 -5.2 -5.52384 | CGATCCGGATCAGGT TGTGGAAGAGGCGATAAA AGGCTA TTTAGCGGCTTATCCACA TTTTTTTGCTAAAAC TERM 376 353848 - 353893 + G 71 -5.3 -4.58685 | overlap 353876 353877 TAAAAATATGCTGGA TGCCGTAGCGGTTGGTGAG ATCTTCTC CTCCCCGGCGGCTGGGGCA TTTTTAGAAGCGTTT dAK1_1 353549 - 354637 + | putative dihydroxyacetone kinase dAK1_2 354644 - 355318 + | hypothetical protein deoR5 356398 - 355439 - | transcriptional regulatory protein TERM 377 355739 - 355757 + g 73 -6 -4.4773 | AGGAGTGAACCAGCC CAGCTCTA CCA TATAGCTG TTTTCGTTCATATCA TERM 378 356602 - 356616 + r 75 -2.2 -5.33131 | overlap 356583 AATCAGTAACTGGTC TTTAAT TTT GTTAAA TTTGTTTTTTTATTA TERM 379 356851 - 356827 - R 72 -6.3 -4.2558 | overlap 356828 356842 GATCCTTCATCAAAA TGCCAGGAGAG TAA CCCTACTGGCG GCAATGCTAATAGGC TERM 380 356850 - 356828 - R 74 -9.8 -3.15027 | overlap 356827 356842 ATCCTTCATCAAAAT GCCAGGAGAG TAA CCCTACTGGC GGCAATGCTAATAGG arsB 358254 - 356965 - | arsenical pump membrane protein TERM 381 358247 - 358236 - G 70 -2.2 -4.9218 | TAGTCAGGATAAAAA TAGC ACCA GCCA ACAACATAACGCCTC arsR1 358680 - 358339 - | DNA-binding transcriptional repressor ArsR YP_0342 359205 - 358927 - | hypothetical protein TERM 382 359422 - 359443 + r 86 -3.1 -5.69068 | opp_overlap 359426, overlap 359426 AAGCTGTAAAGTCAT TAATTTCAT CTCA ATGAATTTA TTTTTTATCTTTTTA YP_0343 359607 - 359401 - | hypothetical protein TERM 383 359426 - 359439 + g 78 -3.9 -5.19003 | opp_overlap 359426, overlap 359422 TGTAAAGTCATTAAT TTCAT CTCA ATGAA TTTATTTTTTATCTT artI1 360798 - 360028 - | extracellular solute-binding protein mauG 362242 - 360863 - | putative cytochrome C peroxidase YP_0346 362784 - 362479 - | hypothetical protein cirA2 362804 - 364999 + | putative outer membrane receptor TERM 384 365232 - 365210 - f 70 -7.7 -3.62255 | opp_overlap 365209, overlap 365206 TTCAAGAAGAACTAA CCGGCCTTT TATCC AAAGGCGGG CTGAATTGGAATTCA YP_0348 365432 - 366619 + | hypothetical protein TERM 385 366806 - 366774 - f 100 -13.6 -3.08073 | opp_overlap 366783 366785, overlap 366784 AGCAGCGCTAATACA TCTGCAGAATGGAG GATAA CTTCATTCTGCAGA CAACCCCCGATGACG TERM 386 366882 - 366858 - g 76 -7.8 -4.4261 | gap 1, opp_overlap 366860, overlap 366859 366860 GGCCGAAGAGTAAAA CGTCCGCGCCA GAGA TGGCGCGG-CT TGAATGGCATTCAGG TERM 387 366881 - 366859 - g 76 -11.3 -3.25084 | gap 1, opp_overlap 366860, overlap 366858 366860 GCCGAAGAGTAAAAC GTCCGCGCCA GAGA TGGCGCGG-C TTGAATGGCATTCAG TERM 388 366860 - 366881 + G 74 -11.5 -3.07994 | opp_overlap 366859 366860 366858 CCGAAGAGTAAAACG TCCGCGCCA GAGA TGGCGCGGC TTGAATGGCATTCAG TERM 389 366881 - 366860 - g 70 -11.5 -2.54568 | opp_overlap 366860, overlap 366859 366858 CCGAAGAGTAAAACG TCCGCGCCA GAGA TGGCGCGGC TTGAATGGCATTCAG wbbJ 366782 - 367003 + | acetyltransferase map 367798 - 367013 - | methionine aminopeptidase YP_0351 368100 - 367795 - | hypothetical protein TERM 390 368160 - 368129 - R 100 -10.2 -4.36595 | opp_overlap 368129, overlap 368157 CACTGAAACGGAAAA GGCCTGAGCTCC GTGAATGA AGAACTCAGGCC TTGATAGCCGCTTAA fumA 369872 - 368229 - | fumarate hydratase, class I TERM 391 369505 - 369521 + g 74 -3.6 -5.03715 | overlap 369507 GCATCGTTACCCCCA GTCCAG ACCCG CTGGCC TTTTTTGCCCATGAT TERM 392 370115 - 370138 + r 72 -9.6 -3.09823 | opp_overlap 370111, overlap 370109 GGCTTAAGCGACGGT TCCACCCTCT TTAT AAAGGGTGGA TCTCATTTTCCGCAC sgbK 371766 - 370270 - | putative L-xylulose kinase TERM 393 371016 - 371000 - G 70 -8.7 -3.60151 | TCGTGTAAACCAGAA GTCAGTG CCG CACCGAC CACATCAAACATGCC sgbU 372658 - 371777 - | putative L-xylulose 5-phosphate 3-epimerase TERM 394 372611 - 372625 + g 74 -4.2 -4.87807 | TTCGACCCAACTGGT GCCC GCAGGTA GGGC TTTTTCGTATATTCC TERM 395 372854 - 372836 - R 72 -7.4 -4.0641 | opp_overlap 372819 GTTTATCTACATAAA CAGTTAGC TGC GCTCACTG GAATCCCAATCACTT araH1 373901 - 372864 - | putative sugar ABC transporter, permeaseprotein araH2 374903 - 373914 - | putative sugar ABC transporter, permease protein mglA1 376410 - 374896 - | putative sugar ABC transporter, ATP-binding protein TERM 396 376013 - 375992 - G 71 -5.8 -4.3586 | GGATCGAGACTAAAA GCCAGTTC ATGCAA GATCTGGC AGGCTTTTTGTTTGA rbsB1 377662 - 376559 - | putative sugar ABC transporter, periplasmic protein glpR2 378533 - 377724 - | DeoR family transcriptional regulator TERM 397 378373 - 378395 + g 100 -4.9 -5.75342 | AGTGCGACAGCGCCG CCAAAACTG CGGAT CAGTTTTTG TTTTTTTTGCAACAC TERM 398 379165 - 379187 + H 100 -10.7 -4.93365 | opp_overlap 379162 379165 379167 CTATTAGTTAAATGA CATCATTCG AATAC CGAATGATG TTTTTCATTATCGCC TERM 399 379187 - 379165 - H 83 -11.4 -2.95116 | opp_overlap 379165, overlap 379162 379167 CTATTAGTTAAATGA CATCATTCGA ATA CCGAATGATG TTTTTCATTATCGCC araD 379236 - 379931 + | L-ribulose-5-phosphate 4-epimerase dmsA1 380373 - 382844 + | anaerobic dimethyl sulfoxide reductase chain A dmsB1 382856 - 383473 + | anaerobic dimethyl sulfoxide reductase chain B dmsC1 383412 - 384335 + | anaerobic dimethyl sulfoxide reductase chain C TERM 400 384360 - 384386 + F 100 -15.3 -3.85092 | GGCGGTGACACTTTG GCTATTCTGGG GAGCG CCCAGAATAGC TTTGCTCTGCCTCAT TERM 401 384574 - 384586 + G 84 -2.6 -5.55769 | GGACTAACGGGGCGA GTGC TAGGT GCGC TTTTTTATTGTGAGC torD1 384481 - 385191 + | twin-argninine leader-binding protein DmsD TERM 402 385414 - 385395 - T 100 -13.6 -4.09685 | TTGCATTCTTTAAAA TGTCCCGC AAAC GCGGGACA AAGAGAAACGGAACA cybB1 385978 - 385448 - | cytochrome b561 TERM 403 386006 - 386047 + r 76 -11 -2.56571 | gap 1, overlap 386002 386014 AATATACCCGTCGCC CTTCACGATGCAGG-GGGT TAGCT GCCTACCTGCATCTTGAAG TCACTTGGGTATATA cybC 386509 - 386126 - | putative cytochrome B562 TERM 404 386543 - 386589 + r 82 -6.9 -4.77122 | gap 2, opp_overlap 386551 386555, overlap 386546 386547 386551 386555 TTATGATTTTCTTCT CTTA-TAAATAGAGGGG-GGA AGATAAA TCCTCCCCTCTATTTAGTTAG TTATTTTTTATATCA TERM 405 386546 - 386585 + r 78 -8.8 -3.81144 | gap 1, opp_overlap 386551 386555, overlap 386543 386547 386551 386555 TGATTTTCTTCTCTT ATAAATAGAGGGG-GGA AGATAAA TCCTCCCCTCTATTTAG TTAGTTATTTTTTAT TERM 406 386547 - 386584 + r 89 -12.3 -2.86246 | gap 1, opp_overlap 386551 386555, overlap 386546 386543 386551 386555 GATTTTCTTCTCTTA TAAATAGAGGGG-GGA AGATAAA TCCTCCCCTCTATTTA GTTAGTTATTTTTTA TERM 407 386551 - 386580 + r 80 -8.7 -4.05045 | gap 1, opp_overlap 386551 386555, overlap 386547 386546 386543 386555 TTCTTCTCTTATAAA TAGAGGGG-GGA AGATAAA TCCTCCCCTCTA TTTAGTTAGTTATTT TERM 408 386580 - 386551 - R 78 -8.7 -3.85698 | gap 1, opp_overlap 386551 386547 386546 386543 386555, overlap 386555 TTCTTCTCTTATAAA TAGAGGGG-GGA AGATAAA TCCTCCCCTCTA TTTAGTTAGTTATTT TERM 409 386555 - 386578 + r 75 -8.8 -3.59634 | opp_overlap 386551 386555, overlap 386551 386547 386546 386543 TCTCTTATAAATAGA GGGGGGAAGA TAAA TCCTCCCCTC TATTTAGTTAGTTAT TERM 410 386578 - 386555 - R 71 -8.8 -3.3353 | opp_overlap 386555 386551 386547 386546 386543, overlap 386551 TCTCTTATAAATAGA GGGGGGAAGA TAAA TCCTCCCCTC TATTTAGTTAGTTAT katG 388841 - 386586 - | catalase-peroxidase TERM 411 387297 - 387308 + g 76 -4.4 -4.91109 | CTCTGCGGGATCGTT GACT GGCC AGTC TTTTTGTGGTGCCAG TERM 412 390033 - 390022 - g 74 -7.2 -4.2679 | GAAGCCGCATTAAAA GCGG CGGG CCGC AATGATGTGGTGGTG TERM 413 390191 - 390179 - g 79 -9.1 -4.15833 | ATCAGTATCTGAAAA CCGGT AAA ACCGG TCTGGAAGAGAAACA rbsB2 389320 - 390276 + | putative sugar ABC transporter, periplasmic protein TERM 414 390333 - 390354 + F 89 -11.5 -3.53761 | opp_overlap 390336, overlap 390334 390336 390348 390349 CCGCTTTAGCCGTAA TGAGGGGCG ACAT CGCCCCTCC TTTCAGGAGGCATTA TERM 415 390334 - 390353 + F 100 -15 -2.72043 | opp_overlap 390336, overlap 390333 390336 390348 390349 CGCTTTAGCCGTAAT GAGGGGCG ACAT CGCCCCTC CTTTCAGGAGGCATT TERM 416 390351 - 390336 - f 83 -11.8 -2.72344 | opp_overlap 390334 390333 390336 390348 390349 CTTTAGCCGTAATGA GGGGCG ACAT CGCCCC TCCTTTCAGGAGGCA TERM 417 390336 - 390351 + F 86 -11.8 -2.90496 | opp_overlap 390336, overlap 390334 390333 390348 390349 CTTTAGCCGTAATGA GGGGCG ACAT CGCCCC TCCTTTCAGGAGGCA YP_0369 390369 - 390986 + | putative lipoprotein TERM 418 392049 - 392033 - g 91 -7.9 -5.09173 | opp_overlap 392033 GAAGATCGTAAAAAA GCCGGGA TTT TCCCTGC TTCATCGGTCGCCTG mglA2 390986 - 392509 + | putative sugar ABC transporter, ATP-binding protein araH3 392506 - 393651 + | putative sugar ABC transporter, permease protein TERM 419 394260 - 394234 - g 72 -3.7 -4.89567 | gap 1, opp_overlap 394255, overlap 394229 394235 394236 CTGTAAAACACAAAA CGCCAGGCATTG AACT CAATACCGGG-G CTTTAGGGCACGGTT TERM 420 394458 - 394446 - g 76 -4.8 -5.00267 | AACGACAAAAATAAA CTGC AACTG GCAG GGACCACTAAATCAA tktA1 393897 - 394727 + | putative N-terminal region of transketolase tktA2 394720 - 395664 + | C-terminal region of transketolase TERM 421 395978 - 395938 - g 80 -10.5 -3.66178 | gap 2, opp_overlap 395939, overlap 395939 TTTGGGAACGGGAAA CCGGCAC-GCC-GCTCACG CCAGT CGTAAGCTGGCAGTGCCGT CGTTCAGAGGCTTTC TERM 422 395939 - 395977 + G 74 -11.8 -2.7186 | gap 2, opp_overlap 395938 395939 TTGGGAACGGGAAAC CGGCAC-GCC-GCTCACG CCAGT CGTAAGCTGGCAGTGCCG TCGTTCAGAGGCTTT TERM 423 395977 - 395939 - g 82 -14 -2.79492 | gap 2, opp_overlap 395939, overlap 395938 TTGGGAACGGGAAAC CGGCAC-GCC-GCTCACG CCAGT CGTAAGCTGGCAGTGCCG TCGTTCAGAGGCTTT TERM 424 397127 - 397138 + G 71 -7.2 -4.07885 | CTGGCAAACGGCCAT CGCG CGTG CGCG TTTTCAGCCGAAATA glpK2 395667 - 397154 + | glycerol kinase TERM 425 397362 - 397348 - g 74 -8.6 -4.08767 | GGGAGGTGTGGAAAA TTGGCA TGA TGCCAA GGTGTGCGCTGAATT YP_0375 397175 - 398599 + | hypothetical protein TERM 426 398779 - 398794 + T 76 -10.4 -3.0395 | opp_overlap 398774 AAGAGTAAAGTGTCC GCCCCA TGGC TGGGGC TGTTAACCAATATGT deoR1 399765 - 398821 - | putative transcriptional regulatory protein proP5 401353 - 400013 - | hypothetical protein TERM 427 400898 - 400879 - G 70 -9.3 -3.59233 | overlap 400875 TAACCATTAAAGTAA TCAGCCC CAGCGC GGGCTGA AACATAAGCACCACC TERM 428 401455 - 401471 + H 100 -10.9 -4.41548 | opp_overlap 401468 ATCATGATTTTTTAT CCCCTTT TAA AAAGGGG TTTTCTCCCCTCTCA TERM 429 401481 - 401468 - H 70 -5.2 -4.56775 | opp_overlap 401455 ATCCCCTTTTAAAAA GGGG TTTTCT CCCC TCTCACCGCTATTCG TERM 430 401737 - 401727 - g 71 -6.8 -4.27465 | CATAAGTTAAAAGAA CACG GTG CGTG GGTGACCTGTGCAGA cinA 401541 - 402158 + | competence damage-inducible protein A TERM 431 403229 - 403211 - g 78 -3.8 -5.10933 | opp_overlap 403212, overlap 403213 CTATTTAAAAGAAAA CCCAGC CATTGCT GCTGAG TTAGATAAAAAACTG recA 402273 - 403343 + | recombinase A TERM 432 403402 - 403371 - f 100 -16 -3.73953 | opp_overlap 403371 403375, overlap 403375 ACCAGTTGGAGTAAA CAAACAGACCGTCA CTTG TGGCGGTCTGTTTG TTTGAGTAAATAACA TERM 433 403371 - 403402 + F 100 -18.2 -3.6682 | opp_overlap 403371 403375, overlap 403375 ACCAGTTGGAGTAAA CAAACAGACCGTCA CTTG TGGCGGTCTGTTTG TTTGAGTAAATAACA TERM 434 403375 - 403398 + F 100 -13.2 -4.46514 | opp_overlap 403371 403375, overlap 403371 GTTGGAGTAAACAAA CAGACCGTCA CTTG TGGCGGTCTG TTTGTTTGAGTAAAT TERM 435 403398 - 403375 - f 100 -11 -4.49556 | opp_overlap 403375 403371, overlap 403371 GTTGGAGTAAACAAA CAGACCGTCA CTTG TGGCGGTCTG TTTGTTTGAGTAAAT recX 403481 - 404044 + | recombination regulator RecX TERM 436 406114 - 406101 - g 78 -2.3 -5.27335 | opp_overlap 406102, overlap 406102 GCGGCGAAAGAAAAA GGTGC AATG GCACT GTTCGGCGAGAAGTA alaS 404184 - 406811 + | alanyl-tRNA synthetase TERM 437 406834 - 406860 + F 100 -11.6 -5.48054 | opp_overlap 406832 406834 TCTATTAAATCAACA CGCCATATCTCG GTA CTAGGTATGGCG TTTTTTAATTTTCCT TERM 438 406860 - 406834 - f 74 -9.4 -3.35849 | opp_overlap 406834, overlap 406832 TCTATTAAATCAACA CGCCATATCTCG GTA CTAGGTATGGCG TTTTTTAATTTTCCT csrA 407061 - 407246 + | carbon storage regulator TERM 439 407251 - 407285 + F 100 -15 -5.27206 | opp_overlap 407257, overlap 407254 CGACTTACTGATTTT GAAGCAGCGTCTCGTG TAA CACGAGGCGCTACTGC TTTTTATTGTCTCTA TERM 440 407254 - 407282 + F 100 -15.3 -3.43245 | opp_overlap 407257, overlap 407251 CTTACTGATTTTGAA GCAGCGTCTCGTG TAA CACGAGGCGCTAC TGCTTTTTATTGTCT TERM 441 407279 - 407257 - f 93 -13.4 -2.72463 | opp_overlap 407254 407251 ACTGATTTTGAAGCA GCGTCTCGTG TAA CACGAGGCGC TACTGCTTTTTATTG TERM 442 407953 - 407968 + F 91 -8.2 -4.67635 | opp_overlap 407953, overlap 407963 CACCATATTAAGGAA CCTCGC TATA GCGGGG TTTTCTGCTTTTGGC TERM 443 408068 - 408053 - f 73 -9 -3.52102 | overlap 408067 AGCGTAGCGAGACAA CGTTGC TTTA GCAACG GCCCGTAGGGCGAGG TERM 444 408125 - 408140 + F 91 -8.2 -4.67635 | opp_overlap 408125, overlap 408135 CACCATATTAAGGAA CCTCGC TATA GCGGGG TTTTCTGCTTTTGGC YP_0383 408365 - 408931 + | fructose-1-phosphatase YP_0384 408928 - 409356 + | hypothetical protein gshA 409400 - 410998 + | glutamate--cysteine ligase TERM 445 411025 - 411008 - f 100 -11.3 -5.55001 | CAATAAAAAAGAAAA GGCCACA TCAC TGTGGCC AAATTAACATCTCTA TERM 446 411092 - 411064 - f 100 -10.4 -4.36554 | GATGATGATAACAAA TGCGCGTCTT TCACATATT AAGACGCGCA GGATGAGTAAAAGTT luxS 411166 - 411681 + | S-ribosylhomocysteinase TERM 447 411715 - 411732 + T 87 -4.8 -5.46657 | opp_overlap 411710 411715 411717 AGGAGAATGATAAAA GGCGCT GATTAA AGCGTC TTTTTTATTAAACTG YP_0387 412960 - 411770 - | hypothetical protein ccmC1 414015 - 413122 - | hypothetical protein TERM 448 414539 - 414527 - g 70 -9.1 -3.62518 | opp_overlap 414527 TCAAACAGTTGGAAA CCCTG GCT CAGGG TGTTGGCATTGATTT TERM 449 415149 - 415139 - g 71 -6.8 -4.26076 | opp_overlap 415141 GTATGTTGAGTAAAA TGCC AGG GGCA GGTCAGTTGCCAGAA ffh 414079 - 415440 + | signal recognition particle protein YP_0390 415613 - 415449 - | hypothetical protein TERM 450 415547 - 415567 + g 70 -2.6 -5.00884 | opp_overlap 415547 CAAAATGTGCGAACA GGAATCTA CGCTT TAGATTGC TTTTTTCGCCAAAAT TERM 451 415611 - 415644 + g 100 -18.3 -4.67982 | GGGCTTTTTATATTG CAACTGGACCCCGTT CCCC GATGGGGTCCAGTTG TTTTATTAACTAAAG rpsP 415668 - 415916 + | 30S ribosomal protein S16 rimM 415938 - 416486 + | 16S rRNA-processing protein trmD 416468 - 417265 + | tRNA (guanine-N(1)-)-methyltransferase rplS 417346 - 417693 + | 50S ribosomal protein L19 TERM 452 417755 - 417735 - T 86 -12.6 -2.52987 | opp_overlap 417735, overlap 417734 TTAATACTTATGAAG GGGCTAGC CATGT GCTAGCCC TTTTTTGTGCTCTAT TERM 453 417735 - 417755 + T 100 -12.6 -5.35459 | opp_overlap 417734 417735 TTAATACTTATGAAG GGGCTAGC CATGT GCTAGCCC TTTTTTGTGCTCTAT TERM 454 417937 - 417915 - T 74 -10.6 -2.69545 | opp_overlap 417917, overlap 417914 417917 GGCAGAGAGGAGAAT TAGCGCGGTA TCA CACCACGCTA TATAGACGAATGGTG YP_0395 418767 - 417955 - | hypothetical protein lytT 421592 - 420819 - | putative two-component response-regulatory protein YehT TERM 455 421854 - 421841 - g 76 -5.3 -4.8143 | opp_overlap 421833, overlap 421833 421845 GGAAGAACTGAAAAA TCAGT TTCC ACTGA GCGAAAATGATCAGT aroF 421761 - 422837 + | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 456 423822 - 423836 + G 74 -10 -3.61517 | TACTACAAACGCTTT GGTGAG GCG CTCACC TTGTTAGAGCACCAT tyrA 422850 - 423971 + | bifunctional chorismate mutase/prephenate dehydrogenase TERM 457 424002 - 424030 + T 100 -13.2 -5.69473 | GATAGATTTTTATAG GTCATCCCAGCA CAGCC TGCCGGGATGAC TTTTTTTATGGTGTG pheA 425233 - 424076 - | bifunctional chorismate mutase/prephenate dehydratase TERM 458 425363 - 425346 - R 100 -12.7 -5.77988 | opp_overlap 425346 ATATACATAAAAAAA GCCTCCC GCTT GGGAGGC TTTCTTGTTGTGCCC TERM 459 425346 - 425363 + r 100 -12.7 -4.51812 | opp_overlap 425346 ATATACATAAAAAAA GCCTCCC GCTT GGGAGGC TTTCTTGTTGTGCCC TERM 460 425403 - 425385 - R 100 -16 -4.36914 | opp_overlap 425385 GTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC TERM 461 425385 - 425403 + r 100 -16 -3.07307 | opp_overlap 425385 GTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC dnaC_4 426287 - 425505 - | transposase/IS protein TERM 462 426203 - 426217 + g 77 -11.4 -3.3506 | overlap 426216 CTGCCTGTTGTGACA GCGCAG GCG CTGCGC TTATAAGGCTTTCCA YP_0402 427306 - 426284 - | transposase for insertion sequence IS100 TERM 463 427328 - 427310 - R 100 -13.2 -4.01078 | AAAAGTGACCATAAA CTCTCCTG AAT CAGGAGAG CAGATTACCCCCTGG TERM 464 428392 - 428405 + r 85 -9.5 -4.1721 | opp_overlap 428392 TTTGTCAGCAATCTA GGCCC CTAG GGGCC TTTTAACCTGTAAAT actP 430080 - 428425 - | acetate permease YP_0405 430388 - 430077 - | hypothetical protein TERM 465 430442 - 430419 - R 76 -11 -2.64199 | opp_overlap 430419 430419, overlap 430418 GAGGCATCAATTAAG TTTGCCGCCT ATAT AGGCGGCACA ATTTACGACGGTGTC TERM 466 430419 - 430442 + r 76 -11 -2.72829 | opp_overlap 430418 430419, overlap 430419 GAGGCATCAATTAAG TTTGCCGCCT ATAT AGGCGGCACA ATTTACGACGGTGTC TERM 467 430419 - 430443 + r 76 -9.4 -3.5525 | gap 1, opp_overlap 430418 430419, overlap 430419 GAGGCATCAATTAAG TT-TGCCGCCT ATAT AGGCGGCACAA TTTACGACGGTGTCT acs 432403 - 430445 - | acetyl-CoA synthetase TERM 468 432667 - 432683 + H 76 -6.7 -4.43909 | opp_overlap 432667, overlap 432664 GACTAAAGTAATTTA CATTTAT TAA ATAAATG TTGTTTTATTACCAT gltP 433307 - 434575 + | glutamate/aspartate:proton symporter TERM 469 434656 - 434684 + T 100 -17.5 -5.38054 | opp_overlap 434648 AATAGTATCTACCCA CTCCCCGTCAGCA TCA TACTGACGGGGAG TTTTTATTTGTCGCC citB1 435385 - 434753 - | putative two-component response regulator baeS1 438187 - 435398 - | two-component sensor/regulator gspD2 438389 - 439960 + | type III secretion protein YP_0411 439947 - 441176 + | putative type-III secretion protein YP_0412 441195 - 441416 + | putative type III secretion apparatus TERM 470 442008 - 442026 + G 71 -6 -4.386 | overlap 442010 ATTGGGTATTTCGAC CCGGAAAT TGA ATTTCCTG TTTTATGAGAAATTC araC1 441523 - 442230 + | AraC family transcriptional regulator YP_0414 442240 - 442455 + | putative type III secretion apparatus YP_0415 442452 - 442700 + | putative type III secretion apparatus YP_0416 442798 - 443049 + | putative type III secretion apparatus fliF1 443046 - 443777 + | type III secretion system apparatus lipoprotein YP_0418 443949 - 444545 + | hypothetical protein YP_0419 444629 - 445189 + | putative type III secretion system component TERM 471 446115 - 446134 + G 83 -3.4 -5.42514 | overlap 446110 446109 TTTATCACTTTGGCG GCCGCGGT TGCG GCTCCGGC TTTTTTACTTTATCG flhA1 445176 - 447230 + | secretion system apparatus protein SsaV fliI1 447214 - 448554 + | type III secretion system ATPase sbcC 448551 - 448952 + | type III secretion system apparatus protein TERM 472 449265 - 449253 - g 86 -9.1 -4.54449 | ACAGCGCATACAAAA CCGCT GGC AGCGG CAACTGCATCAGTTA YP_0423 448933 - 449331 + | hypothetical protein fliN1 449309 - 450271 + | type III secretion system protein fliP1 450338 - 451048 + | type III secretion system protein fliQ1 451045 - 451338 + | putative type III secretion apparatus protein TERM 473 452001 - 452012 + G 91 -7.2 -5.1244 | opp_overlap 452001 CGATGCCCATTAAAA GCGC ACTG GCGC TTTTTCTCTTACTGA TERM 474 452012 - 452001 - g 74 -7.2 -4.26076 | opp_overlap 452001 CGATGCCCATTAAAA GCGC ACTG GCGC TTTTTCTCTTACTGA fliR1 451340 - 452134 + | putative type III secretion apparatus protein flhB1 452121 - 453191 + | secretion system apparatus protein SsaU TERM 475 453312 - 453296 - f 76 -9.5 -3.40878 | overlap 453294 ATTATGTGAATAATA GGCTTAT TAT ATAAGCC TCAGACTGCTGACAA TERM 476 453401 - 453375 - f 84 -10.1 -3.82218 | gap 1, opp_overlap 453384, overlap 453376 453391 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 477 453402 - 453376 - f 72 -10.1 -2.88849 | gap 1, opp_overlap 453384, overlap 453375 453391 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT TERM 478 453480 - 453502 + F 72 -7.8 -3.77489 | opp_overlap 453483, overlap 453481 453483 TTGTCAATAACCTCA ATAGGCTTAT TAT ATAAGCCTAC TTTCCCTGTTACCTT TERM 479 453481 - 453501 + F 81 -11.3 -2.8577 | opp_overlap 453483, overlap 453480 453483 TGTCAATAACCTCAA TAGGCTTAT TAT ATAAGCCTA CTTTCCCTGTTACCT TERM 480 453483 - 453499 + F 71 -9.5 -2.974 | opp_overlap 453483, overlap 453481 453480 TCAATAACCTCAATA GGCTTAT TAT ATAAGCC TACTTTCCCTGTTAC TERM 481 453499 - 453483 - f 72 -9.5 -3.12749 | opp_overlap 453483 453481 453480 TCAATAACCTCAATA GGCTTAT TAT ATAAGCC TACTTTCCCTGTTAC TERM 482 454144 - 454111 - g 70 -2.3 -5.05228 | overlap 454112 ATTAAACTACAAAAA GTGACTGCCGCCTCA CCAC TGACGCAGCACCCAG CCAGAGCGGCACGCC YP_0429 453574 - 454788 + | putative inner membrane protein sirA1 454785 - 455054 + | hypothetical protein lysR2 456118 - 455132 - | LysR family transcriptional regulator TERM 483 455909 - 455880 - G 74 -10.1 -3.63839 | gap 1, opp_overlap 455880 455879 455877 455876 455903 TGATGAAACAAGTAA TCGCCAGCATCGGT TAA AACGATGCTG-CGA GTGGTTCTTTTTAAT sdaC1 456285 - 457571 + | putative transmembrane transport protein metC2 457617 - 458798 + | cystathionine beta-lyase TERM 484 458899 - 458911 + T 77 -4.7 -5.0538 | GTTGGTGCTTTGGAA CCGCC ATA GGCTG TTTTTTAGCATAGCG hmuV 459739 - 458939 - | hemin importer ATP-binding subunit TERM 485 459331 - 459319 - G 83 -9.1 -4.4009 | CGCCACCGGATAAAA CGCGA TAG TCGCG CTGTGCCAGTGCCAG hmuU 460736 - 459732 - | hemin transport system permease protein HmuU hmuT 461572 - 460733 - | hemin-binding periplasmic protein TERM 486 461401 - 461368 - G 78 -13.2 -2.68823 | opp_overlap 461368 461370, overlap 461371 461373 GCGTGCGCATATAAC CAACATCAGGCAGC TTTTGC GCTGCCTGAGGCTG TTGACTGGTGCTGTC TERM 487 461368 - 461401 + g 74 -11 -3.11192 | opp_overlap 461368 461371 461373, overlap 461370 GCGTGCGCATATAAC CAACATCAGGCAGC TTTTGC GCTGCCTGAGGCTG TTGACTGGTGCTGTC TERM 488 461398 - 461371 - G 77 -11.3 -3.49618 | opp_overlap 461370 461368, overlap 461368 461373 TGCGCATATAACCAA CATCAGGCAGC TTTTGC GCTGCCTGAGG CTGTTGACTGGTGCT TERM 489 461396 - 461373 - G 81 -12.5 -3.32023 | opp_overlap 461370 461368, overlap 461371 461368 CGCATATAACCAACA TCAGGCAGC TTTTGC GCTGCCTGA GGCTGTTGACTGGTG hmuS 462606 - 461569 - | hemin transport protein TERM 490 462692 - 462664 - R 82 -10.3 -3.60419 | opp_overlap 462660 ATTGTCAAATGATAA TCCGGCAAGCCAC AAA ATGGATTACCGGA TGAATGATTTCAGAC hmuR 464755 - 462725 - | hemin receptor precursor YP_0439 465076 - 464885 - | putative hemin uptake protein hemp YP_0440 465812 - 465162 - | hypothetical protein YP_0441 466409 - 465846 - | hypothetical protein TERM 491 466037 - 466047 + g 71 -5.4 -4.52047 | overlap 466028 GTTCCAGCAGGGCGA TTGC CTG GCAA TTTTGTGCTCTGATA dnaC_5 468220 - 467438 - | transposase/IS protein TERM 492 468136 - 468150 + g 77 -11.4 -3.3506 | overlap 468149 CTGCCTGTTGTGACA GCGCAG GCG CTGCGC TTATAAGGCTTTCCA YP_0444 469239 - 468217 - | transposase for insertion sequence IS100 TERM 493 469261 - 469243 - R 100 -13.2 -4.01078 | AAAAGTGACCATAAA CTCTCCTG AAT CAGGAGAG CAGATTACCCCCTGG TERM 494 469907 - 469888 - R 70 -3.5 -4.78981 | opp_overlap 469900, overlap 469890 469902 ATCAAGCAAAAGAAA TGGGGGT TGATAT AGCCCCA CCCATCAGAGTGAGG metF2 470819 - 470019 - | putative methylenetetrahydrofolate reductase TERM 495 470249 - 470236 - G 74 -2.3 -5.09521 | opp_overlap 470237, overlap 470237 TCAATAAATGAAAAA TTGCC AAGT GGCAT TATGGATGGCGTAAA YP_0446 471622 - 471134 - | hypothetical protein citE1 472978 - 472019 - | putative ATP/GTP-binding protein YP_0448 474057 - 472978 - | hypothetical protein TERM 496 473765 - 473746 - G 73 -12.2 -2.57944 | overlap 473745 GAGCATCACACCAAG TGGTACGC CCGC GCGTACCA AGCTGGCGAGCACGA YP_0449 474868 - 474050 - | hypothetical protein TERM 497 474337 - 474326 - G 70 -4.4 -4.66938 | ACGGTGAATATAAAA TCCA TCAG TGGA AAAGAGGGATTCCAG YP_0450 475991 - 474855 - | hypothetical protein TERM 498 475586 - 475602 + g 76 -4.3 -4.94058 | AATAGAGCAGGTGAT CCGTTGC ATG GCTATGG TTTTCTTTGAATTCG YP_0451 477064 - 476003 - | hypothetical protein TERM 499 476628 - 476613 - G 71 -6 -4.30576 | TTTTCAGTATCAAAA GGCGGG TTAG CCAGCC ATTCACGCAATTCAT TERM 500 476862 - 476877 + g 71 -6.1 -4.3467 | opp_overlap 476862 476873 AATGCTTTCACGATA TGGCG GATAAA CGCCA TTTTGGTGTCAAGAT terZ 477307 - 477933 + | tellurium resistance protein TERM 501 477949 - 477961 + G 71 -10.5 -3.12327 | overlap 477947 TGAATCTGATGCCTG GGGGC AAT GCCCC TGTTGCGTCTCAGAC TERM 502 478090 - 478108 + G 71 -7.4 -4.03234 | ATGGTCAACCGGTTA CGGATGAT AGC ACCATCCG TTTGTCTGGGCAGGG TERM 503 479056 - 479042 - g 72 -10 -3.45634 | AGTTGAACGAATTAA CCGCTA TTT TAGCGG ACACAAAGAAATGGA terA 477942 - 479117 + | putative tellurite resistance protein TERM 504 479329 - 479314 - g 83 -3.3 -5.42605 | GGAAGAAAAACAAAA GATGA TCATGT TCATC AAGCAGTCGCCTGAA TERM 505 479400 - 479390 - g 71 -6.8 -4.1552 | GAGTTCTTTAACAAA CTGG TTA CCAG CTATGAATTTGATGC terB 479150 - 479605 + | tellurite resistance protein terC1 479627 - 480664 + | tellurium resistance protein terD 480722 - 481306 + | tellurium resistance protein TERM 506 481437 - 481461 + F 100 -12.3 -3.61268 | opp_overlap 481427 481439 ATTAACGTATTCATA TATTCAGGGCA AAA TGCTCTGAATA TTTAACACTTCAGTG terE 481490 - 482065 + | tellurium resistance protein TERM 507 482087 - 482105 + F 100 -12.4 -5.81412 | opp_overlap 482087 CCCGTTTCAATTAAA CCCTGCTG CAT CGGCAGGG TTTTTTTTCGCTCAA TERM 508 482105 - 482087 - f 86 -10.2 -3.90112 | opp_overlap 482087 CCCGTTTCAATTAAA CCCTGCTG CAT CGGCAGGG TTTTTTTTCGCTCAA YP_0458 482778 - 483416 + | hypothetical protein TERM 509 484001 - 484013 + G 70 -10.5 -3.02013 | opp_overlap 484000 GTGAGAATATGGAAG CCCGG TGG CCGGG TATGGTTGTTAAACT fimD1 483667 - 486045 + | putative outer membrane fimbrial usher protein fimC1 486117 - 486860 + | putative periplasmic chaperone protein proP6 486868 - 487125 + | hypothetical protein TERM 510 488497 - 488477 - g 72 -8.3 -3.88291 | opp_overlap 488477 GACGAGCTGGATAAA CGTAATCCG GGG CTGATTACG TTTACGCATTGCCCA TERM 511 488795 - 488811 + G 71 -7.2 -4.07568 | opp_overlap 488795 GCGGTAACCCATACA CCTCGC TACTT GCGGGG TTTTACACCGGGGCA TERM 512 489468 - 489485 + G 70 -8.3 -3.79138 | opp_overlap 489458, overlap 489472 489474 ATTTACTGGGGTTCA CCCCCGG GCAG CAGGGGG TTTGCTGCGTGTATT YP_0462 488237 - 489637 + | hypothetical protein TERM 513 489649 - 489639 - f 75 -3.2 -5.1471 | overlap 489648 ACGAGAAAAAATAAA TCCC AAA GAGA TGGCTTGCTATTTTA YP_0463 490060 - 490314 + | hypothetical protein glcD1 490646 - 492703 + | putative oxidoreductase TERM 514 492732 - 492711 - T 74 -10.1 -3.14878 | overlap 492709 492714 GTCGTTAATCCAACA GGAGGTGCC GAGA GGCACCTCA GACTGCTGACAAACC TERM 515 492729 - 492714 - T 75 -10.4 -2.77791 | overlap 492711 492709 GTTAATCCAACAGGA GGTGCC GAGA GGCACC TCAGACTGCTGACAA TERM 516 492818 - 492792 - T 84 -10.1 -3.82218 | gap 1, opp_overlap 492801, overlap 492793 492808 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 517 492819 - 492793 - T 72 -10.1 -2.88849 | gap 1, opp_overlap 492801, overlap 492792 492808 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT YP_0465 496856 - 493047 - | hypothetical protein TERM 518 494271 - 494291 + g 70 -11.1 -2.50816 | overlap 494270 GTTCACCCGGACCGA GGTGGTGCC GGT GGCATCGCC GTTGATCACTAACCG TERM 519 496608 - 496644 + g 76 -8 -4.21933 | overlap 496610 ACCTGGCCGGGTCTC AACGGCGATATCCGTG CCGAA CAGGGATATCGCGGTG TTATTTTCACCTTCG TERM 520 496610 - 496642 + g 80 -10.6 -3.70108 | overlap 496608 CTGGCCGGGTCTCAA CGGCGATATCCGTG CCGAA CAGGGATATCGCGG TGTTATTTTCACCTT TERM 521 497106 - 497118 + H 70 -2.7 -5.01823 | ATAAGACCCGGCTAA TTCTT TGT AGGAA TTTTCTTGTTATTGT TERM 522 497620 - 497632 + H 72 -7.7 -3.87925 | CGGGTACCTATTCTG CGCTA CAA TAGCG TTCTGTTTACTAATT ubiC 497688 - 498212 + | chorismate pyruvate lyase ubiA 498378 - 499244 + | 4-hydroxybenzoate octaprenyltransferase TERM 523 499358 - 499336 - T 100 -10.6 -5.09426 | opp_overlap 499336 499356 GGTAATGGTAAAAAA TGGCCGGA TAATGAG TCCGGCCA TTGTTATGGTATTCA TERM 524 499336 - 499358 + T 95 -11.3 -3.89291 | opp_overlap 499336, overlap 499356 GGTAATGGTAAAAAA TGGCCGGAT AATGA GTCCGGCCA TTGTTATGGTATTCA TERM 525 499378 - 499398 + T 93 -12.5 -3.0644 | opp_overlap 499379, overlap 499384 TATGGTATTCAGAAA ACCCCCTGC TAG GCAGGGGGC TGTTAAGCATTGAGT TERM 526 499397 - 499379 - T 100 -16 -4.42653 | opp_overlap 499378 499384 ATGGTATTCAGAAAA CCCCCTGC TAG GCAGGGGG CTGTTAAGCATTGAG plsB 501902 - 499425 - | glycerol-3-phosphate acyltransferase TERM 527 501425 - 501409 - G 70 -3 -4.83169 | gap 1, overlap 501410 ACGGTGGTAGAAAAA CGC-ACA AAAC TGTCGCG CCCCAACCACAATAC TERM 528 501823 - 501838 + g 76 -6.8 -4.57341 | TCAGAGACCGGATCT GCAGGG ATAA CCTTGC TTTTTACCAACAATT TERM 529 501944 - 501954 + H 71 -6.8 -4.18401 | opp_overlap 501944 TTCGTCGCAAGGATA CCAG AAA CTGG TTTTGAGATCTGTGG TERM 530 502181 - 502198 + G 70 -3.3 -4.84642 | CCTTCTGGTTGGATG TGGGTGC CATA GCGCGCA TTTTATTAATTTGCA dgkA 502030 - 502401 + | diacylglycerol kinase lexA1 502526 - 503134 + | LexA repressor TERM 531 503161 - 503189 + T 78 -9 -3.88015 | gap 1, opp_overlap 503164, overlap 503162 503164 TTCCTCCCAGAATAA TA-AGCCGTGCCT GTTG AGGTACGGCTCTA TTTCATGATTCTCTA TERM 532 503162 - 503187 + T 78 -9.7 -3.51793 | opp_overlap 503164, overlap 503161 503164 TCCTCCCAGAATAAT AAGCCGTGCCT GTTG AGGTACGGCTC TATTTCATGATTCTC TERM 533 503164 - 503185 + T 95 -12.3 -3.32233 | opp_overlap 503164, overlap 503162 503161 CTCCCAGAATAATAA GCCGTGCCT GTTG AGGTACGGC TCTATTTCATGATTC TERM 534 503185 - 503164 - T 86 -10.1 -4.02817 | opp_overlap 503164 503162 503161 CTCCCAGAATAATAA GCCGTGCCT GTTG AGGTACGGC TCTATTTCATGATTC fur1 503817 - 503308 - | zinc uptake transcriptional repressor TERM 535 503760 - 503794 + g 95 -12.2 -4.36411 | TCAGCCGGACGTTTC GTTGTTGGCACAGGCT TTC AGCTTGTGCGAGCAGC TTTTCCTGATTGATA YP_0472 504072 - 505109 + | tRNA-dihydrouridine synthase A TERM 536 505219 - 505252 + F 100 -15.5 -3.13908 | overlap 505213 TTCGGCAAATTGGGC CCCCGAATTATTTAC TGGC GTAAGTGATTCGGGG TTCACTCATTCACTT pspG 505625 - 505843 + | phage shock protein G TERM 537 506046 - 506030 - T 71 -3 -5.03994 | gap 1, opp_overlap 506038, overlap 506032 TGTTAGAGATAAAAA TAGCCGT ATAA ACGGC-A CGTTCATTTACGTGA TERM 538 506045 - 506032 - T 76 -8.1 -4.14422 | opp_overlap 506038, overlap 506030 TTAGAGATAAAAATA GCCGT ATAA ACGGC ACGTTCATTTACGTG TERM 539 506122 - 506149 + T 100 -14.9 -4.69664 | opp_overlap 506114 506113 506122 506124 506126 AAGAAAGTGTAATGA CAGAGGGCTCC TTAATC GGGGCCCTCTG TTTTTCAATCATGTA TERM 540 506149 - 506122 - T 89 -12.7 -2.78395 | opp_overlap 506122, overlap 506114 506113 506124 506126 AAGAAAGTGTAATGA CAGAGGGCTCC TTAATC GGGGCCCTCTG TTTTTCAATCATGTA TERM 541 506147 - 506124 - T 71 -9.5 -2.9296 | opp_overlap 506122, overlap 506122 506114 506113 506126 GAAAGTGTAATGACA GAGGGCTCC TTAATC GGGGCCCTC TGTTTTTCAATCATG qor1 507240 - 506188 - | quinone oxidoreductase, NADPH-dependent TERM 542 506381 - 506403 + g 70 -2.6 -4.99134 | overlap 506385 TAGACATTCAGTGAA GGGCGGGT GACATAG ATCCCCCC TTTTTGGTTTAGAAT dnaB 507503 - 508909 + | replicative DNA helicase TERM 543 509632 - 509612 - g 70 -9.7 -3.28712 | opp_overlap 509600 CTGCGGTGGCCACAA GCGCACC GTGATTG GGTGCGC CCAGGGATTGTGCTG TERM 544 509789 - 509799 + G 70 -8.2 -3.727 | ACCTGGGTCAGTGAG CGCG ATA CGCG TTTAGGTGTGATCGC alr 509006 - 510085 + | alanine racemase tyrB 510271 - 511464 + | aromatic amino acid aminotransferase mmcQ 511991 - 512350 + | hypothetical protein TERM 545 512404 - 512438 + T 74 -9.4 -3.35088 | gap 1, overlap 512406 ACGCTGAATGTCATA CC-CTCTGGAGCAAT ACATTG ATTGCCCCAGAGTGG TTCATTAAACGGTTT TERM 546 512406 - 512435 + T 77 -10.8 -2.84098 | overlap 512404 GCTGAATGTCATACC CTCTGGAGCAAT ACATTG ATTGCCCCAGAG TGGTTCATTAAACGG uvrA 515286 - 512443 - | excinuclease ABC subunit A ssb 515744 - 516292 + | single-strand DNA-binding protein TERM 547 516381 - 516400 + T 100 -15 -3.52073 | opp_overlap 516378 516379 ATTAGCTTTAAACGG CCGCGCCA CGGA TGGCGCGG TTCTAGTATTCAGGA YP_0481 516856 - 516539 - | hypothetical protein eutG 518015 - 516867 - | alcohol dehydrogenase rhaD 518906 - 518082 - | rhamnulose-1-phosphate aldolase TERM 548 518428 - 518441 + g 72 -3.8 -4.88067 | AACAGGCGCGTGAAG CTGG CGTTCT CCAG TTTTTGTACATAACT rhaA 520181 - 518919 - | L-rhamnose isomerase rhaB 521629 - 520172 - | rhamnulokinase purM 521628 - 521834 + | phosphoribosylaminoimidazol (AIR) synthetase TERM 549 522035 - 522016 - fH 72 -9.2 -3.10164 | CTATCGAGGACTGAA GCAGGGCG ATTT CGCCGTGC CTGTCGAAAGAGGGC rhaS 522056 - 522877 + | transcriptional activator RhaS rhaR 523010 - 523882 + | transcriptional activator RhaR TERM 550 523965 - 523935 - T 86 -11.3 -3.25896 | gap 1, opp_overlap 523934, overlap 523938 CGATTAGCCATAAGA TAACGGGCAG-GTT TTTC AACGCTGCCCGTCA ATATCATCATCTTTA TERM 551 523962 - 523938 - T 88 -10.8 -3.76568 | gap 1, opp_overlap 523934, overlap 523935 TTAGCCATAAGATAA CGGGCAG-GTT TTTC AACGCTGCCCG TCAATATCATCATCT rhaT2 525139 - 524051 - | rhamnose-proton symporter YP_0490 525239 - 525505 + | hypothetical protein TERM 552 525905 - 525890 - T 89 -7.5 -5.05116 | opp_overlap 525890 525903 TTAGAAATAACAAAA CCCGC ACATTG GCGGG TTCGTTGACATTAAA YP_0491 526366 - 525941 - | hypothetical protein YP_0492 526596 - 526763 + | hypothetical protein TERM 553 528809 - 528788 - g 70 -2.9 -4.89567 | overlap 528789 528790 TTGGAAAATATAAAA TCGGCAGCA GAAA TGCTGCGTA GTCACCCTATAATGT YP_0493 526778 - 529348 + | enhancing factor TERM 554 529770 - 529751 - T 100 -11.4 -4.84527 | opp_overlap 529751 529750 TCCAGATACGAAAAA GCCCCGCT TTGC AGCGAGGC CTTATAAATAATGGT TERM 555 529815 - 529831 + T 76 -10.9 -2.62616 | opp_overlap 529814 529812 529809 TCGAACCAAGGACAC GGGGATT TTC AATCCCC TGCTCTACCGACTGA acrR1 530577 - 530002 - | putative transcriptional regulator YP_0495 530609 - 530794 + | hypothetical protein TERM 556 531125 - 531107 - g 77 -11.8 -3.14126 | opp_overlap 531106, overlap 531099 TGATAAACCGGAATA TTTCACCC CAC GGGTGAAA GTATTCAAAGGCGAT TERM 557 531438 - 531424 - g 71 -7.1 -4.25104 | CTGCCTGTATTAAAA CCTGC CCTAC GCAGG CTCTGACCTTGGTGG TERM 558 531504 - 531488 - g 83 -9.4 -4.35461 | overlap 531497 TCAACAGCAGCAAAA GCGCCA ACACA TGGCGC TGAATGAGCACAATG TERM 559 531586 - 531574 - g 76 -5.5 -4.87803 | CATCGTCAAATAAAA GCATC CGC GACGC AACACCGGTTAACCT gltD1 530997 - 533012 + | putative oxidoreductase Fe-S binding subunit hydN 533035 - 533592 + | 4Fe-4S ferrodoxin fdhF 533615 - 535762 + | formate dehydrogenase H TERM 560 535780 - 535822 + T 100 -8.3 -4.77173 | overlap 535782 TGTCGTGATTGAGCG TTGATTATGCCACGGCGAG ACCTA CTCGCCGTGGCGACAGCTA TTTATTTTGTAACCG TERM 561 535782 - 535820 + T 90 -10.9 -3.99938 | overlap 535780 TCGTGATTGAGCGTT GATTATGCCACGGCGAG ACCTA CTCGCCGTGGCGACAGC TATTTATTTTGTAAC dipZ 537611 - 535824 - | thiol:disulfide interchange protein precursor cutA 537946 - 537587 - | divalent-cation tolerance protein CutA TERM 562 537725 - 537760 + g 73 -9.2 -3.75629 | gap 1 ATGGTCAGTATTGCT CTTGAACAAGAG-CTGA ACC TCATACTCTTGTTCGAG TTTACCTTCCCAGTA TERM 563 538052 - 538039 - R 71 -9.5 -2.91126 | overlap 538034 ACAAATCATACTATA CCCCG AAGC CGGGG CCAGTCAGAAGATGA TERM 564 538127 - 538096 - R 77 -10.2 -3.18511 | gap 1, overlap 538100 GAGAGATAGACCGAA GT-TATTGGGGCGCA TGA TGCGCCCCATCAGAC AGATTACAGAACCAG TERM 565 538122 - 538100 - R 91 -13.4 -2.56571 | overlap 538096 GATAGACCGAAGTTA TTGGGGCGCA TGA TGCGCCCCAT CAGACAGATTACAGA dcuA 539432 - 538131 - | anaerobic C4-dicarboxylate transporter TERM 566 539527 - 539499 - R 100 -10.4 -5.04601 | gap 2, opp_overlap 539503 GCCAGAAAGTAAAAA GGCACGC-TG-TCC AGA GGAGCATGCGTGCC TTAGAGGGCTACCGA aspA 540988 - 539552 - | aspartate ammonia-lyase YP_0503 541566 - 541387 - | hypothetical protein fxsA 541436 - 542014 + | FxsA groES 542269 - 542562 + | co-chaperonin GroES TERM 567 543240 - 543230 - g 71 -6.8 -4.25056 | opp_overlap 543229 TACTTCATCAATAAA CCAG AAA CTGG CTCTATTGAACTTGA groEL 542609 - 544255 + | chaperonin GroEL TERM 568 544332 - 544363 + F 100 -16.8 -4.38154 | opp_overlap 544324 544337, overlap 544337 AGGTAAAGCTGTTGA TAAAAGCGAGTAGG GTGA CCTGCTCGCTTTTA TTTTGTGAAGACTGT TERM 569 544337 - 544358 + F 100 -12.3 -5.18371 | opp_overlap 544324 544337, overlap 544332 AAGCTGTTGATAAAA GCGAGTAGG GTGA CCTGCTCGC TTTTATTTTGTGAAG TERM 570 544358 - 544337 - f 93 -10.1 -4.37658 | opp_overlap 544332 544337, overlap 544324 AAGCTGTTGATAAAA GCGAGTAGG GTGA CCTGCTCGC TTTTATTTTGTGAAG YP_0507 544368 - 544604 + | hypothetical protein YP_0508 544879 - 545277 + | putative lipoprotein kamA 546590 - 545562 - | hypothetical protein TERM 571 546734 - 546719 - g 76 -8.2 -4.1466 | opp_overlap 546719 546718 546721 AGCGAATTCGTAAAA CCCGGC AAAG GCCAGG CTTTTGCGCGTGTTA efp1 546626 - 547192 + | elongation factor P TERM 572 547551 - 547565 + G 80 -4.2 -5.09762 | TTATTACCCTCGTCG CAATGG CTG CCAGTG TTTTTCTATTGGCCT sugE 547292 - 547753 + | suppresses groEL, may be chaperone TERM 573 547892 - 547870 - T 100 -13.4 -4.0825 | GCTTTAACCAAAGAA CGGCCTGCCA GAA CAGCAGGCCG CGAATATGGCATGTG frdD 548274 - 547918 - | fumarate reductase subunit D frdC 548683 - 548291 - | fumarate reductase subunit C TERM 574 548624 - 548613 - G 74 -2.2 -5.10064 | overlap 548614 548622 CGCAACATATAAAAA CGGT AGAA ACCA AGCTGTTGCCACCAG frdB 549434 - 548700 - | fumarate reductase iron-sulfur subunit frdA 551250 - 549427 - | fumarate reductase flavoprotein subunit YP_0516 551357 - 551548 + | hypothetical protein YP_0517 551708 - 552685 + | lysyl-tRNA synthetase TERM 575 552782 - 552756 - T 82 -5.9 -4.97405 | gap 1, opp_overlap 552758 552761, overlap 552758 ACTTACAAAAACAAA TACCCTG-ACCT GTGA AGGCGCAGGGCA TTTTTATTTCTTACT TERM 576 552761 - 552782 + T 91 -6.5 -5.48514 | opp_overlap 552758 552756, overlap 552758 CAAAAACAAATACCC TGACCTGTG AAGG CGCAGGGCA TTTTTATTTCTTACT YP_0518 556165 - 552806 - | hypothetical protein TERM 577 553889 - 553916 + g 71 -11.3 -2.71364 | gap 1, opp_overlap 553906 TTCCTCACCACGGGC GCGCTGCGC-GA GAATA TCGGCGCGGCGC TGCTTGGCGCGATCA TERM 578 553973 - 553939 - G 79 -12.3 -3.30701 | gap 1, opp_overlap 553939 553942, overlap 553934 553942 CGCGATCAAAGGCAA TACGCCGCCGCTGGAT CAGC ATCCAACGGCGG-ATA ATATGATAGACCACT TERM 579 553971 - 553942 - G 81 -14.3 -2.52602 | opp_overlap 553939 553942, overlap 553934 553939 GATCAAAGGCAATAC GCCGCCGCTGGAT CAGC ATCCAACGGCGGA TAATATGATAGACCA TERM 580 553942 - 553971 + g 73 -12.1 -2.66316 | opp_overlap 553934 553942 553939, overlap 553939 GATCAAAGGCAATAC GCCGCCGCTGGAT CAGC ATCCAACGGCGGA TAATATGATAGACCA TERM 581 554341 - 554331 - G 70 -4.6 -4.65838 | opp_overlap 554335, overlap 554335 GACAGACGGTAAAAA CGCA TTG CGCG CGCAACTTGTGTTGG TERM 582 555478 - 555488 + g 76 -4.6 -5.04175 | overlap 555477 GCTGAGCCTGAACCC GTGC TTC GCGC TTTTTGTATAATTCG psd 557070 - 556189 - | phosphatidylserine decarboxylase TERM 583 557133 - 557105 - R 70 -5.8 -4.38141 | overlap 557107 CGTTAGATAAAATAA GGGGGCGCATTG TATCG CTCTGCGCCCAC CCTGTCAGACCCTTC YP_0520 558447 - 557395 - | ribosome-associated GTPase TERM 584 559159 - 559176 + G 76 -6.3 -4.71776 | GTCAGTCGCCGAGCT TGCTTAC TATC GTGAGCA TTTTATTCAATCTTA orn 558647 - 559192 + | oligoribonuclease YP_0522 559742 - 559467 - | hypothetical protein TERM 585 559792 - 559776 - RH 76 -10.9 -2.62616 | TCAGTTGGTAGAGCA CGACCTT GCC AAGGTCG GGGTCGCGAGTTCGA TERM 586 560052 - 560071 + rH 84 -2.9 -5.69262 | gap 1 ACTTGTGCTTTTTTT TGCACTTG ATTGC CAAG-GCA TTTTTATTTTTATGC YP_0523 561372 - 560137 - | putative iron-sulfur cluster-binding protein TERM 587 561074 - 561091 + gH 75 -8.5 -3.86202 | opp_overlap 561077, overlap 561077 GCATAGCGGCTGACA TAACCCA ATTC TGGGTTA TTTAATGTACTGGCA TERM 588 561200 - 561218 + gH 82 -10.3 -3.59087 | GCACGCAGCATACCG TGGCGTG CCATC CACGCCA TTTCGCCATGATATT TERM 589 561296 - 561278 - GH 71 -8.2 -3.53012 | opp_overlap 561277 TCTTCCGCCGTCAAA TCGGTATC GCA AATACCGA CTTGCTGGAAACCTA TERM 590 562427 - 562415 - gH 80 -9.1 -3.97602 | CAACAGAGTGATAAA CCCAC CTT GTGGG ATGCGGATGCACTTA YP_0524 561371 - 562885 + | hypothetical protein YP_0525 562896 - 563366 + | putative ATPase TERM 591 563794 - 563780 - g 71 -5.7 -4.36433 | CGAAAGATGAACAAA GTACC CGCCT GGTAC TGGAACTGACGCAGA TERM 592 563843 - 563819 - g 73 -2.8 -5.04601 | gap 1 CGCAGAAAGTAAAAA CCCGTGCTGTC ACCC AACAGT-CGGG CAATAACTACACGGT TERM 593 565090 - 565076 - g 71 -11.4 -2.72511 | overlap 565075 GCCAGCGGTTGAAAG TGCCCG CGT CGGGCA GTACGGTAACGGCAG amiB 563374 - 565287 + | N-acetylmuramoyl-l-alanine amidase II mutL 565303 - 567210 + | DNA mismatch repair protein TERM 594 567704 - 567722 + G 100 -3.9 -6.23545 | gap 1, opp_overlap 567703 567702, overlap 567707 AATGATCCCCAAAGG CTCTCCAG AGCA CTGGA-AG TTTTTTTTATTTCAG miaA 567203 - 568144 + | tRNA delta(2)-isopentenylpyrophosphate transferase hfq 568260 - 568565 + | RNA-binding protein Hfq hflX 568664 - 569950 + | putative GTPase HflX TERM 595 570360 - 570347 - g 74 -2.3 -5.19261 | AAACTGAGCAAAAAA CTGAG TAGC CTCGG TGGCAAAGGTAGCGG hflK 570191 - 571450 + | FtsH protease regulator HflK hflC1 571454 - 572458 + | FtsH protease regulator HflC TERM 596 572572 - 572590 + G 87 -9.5 -4.43213 | TGAACGTAACACCGA GGCCCGT CTAGT GCGGGCC TTTTCATGTGTTGAA YP_0533 572522 - 572830 + | hypothetical protein TERM 597 573300 - 573290 - g 76 -6.8 -4.57341 | AATGCGCGTGAAAAA GCAC GTG GTGC AAAAGCTATCGGTAC TERM 598 573442 - 573419 - g 80 -10.4 -3.67976 | opp_overlap 573435, overlap 573423 573436 GCTATCAAGCTGAAA GAAATTGTGG AATA CCACAACTTC CAGTTGGTGCATTAC TERM 599 573438 - 573423 - g 79 -7.6 -4.46233 | opp_overlap 573435, overlap 573419 573436 TCAAGCTGAAAGAAA TTGTGG AATA CCACAA CTTCCAGTTGGTGCA purA 572918 - 574228 + | adenylosuccinate synthetase TERM 600 574344 - 574315 - f 100 -13.7 -3.53224 | opp_overlap 574315 574318 574322, overlap 574318 574322 TATTTGTGTTCGAAA CAATAAACCGGGC TGAT GTCCGGTTTATTG TCTAATACATCCAGC TERM 601 574315 - 574344 + F 100 -15.9 -2.80816 | opp_overlap 574315 574318 574322, overlap 574318 574322 TATTTGTGTTCGAAA CAATAAACCGGGC TGAT GTCCGGTTTATTG TCTAATACATCCAGC TERM 602 574341 - 574318 - f 81 -9.6 -3.90744 | opp_overlap 574318 574315 574322, overlap 574315 574322 TTGTGTTCGAAACAA TAAACCGGGC TGAT GTCCGGTTTA TTGTCTAATACATCC TERM 603 574318 - 574341 + F 91 -11.8 -3.55447 | opp_overlap 574315 574318 574322, overlap 574315 574322 TTGTGTTCGAAACAA TAAACCGGGC TGAT GTCCGGTTTA TTGTCTAATACATCC TERM 604 574337 - 574322 - f 73 -6 -4.56978 | opp_overlap 574318 574315 574322, overlap 574318 574315 GTTCGAAACAATAAA CCGGGC TGAT GTCCGG TTTATTGTCTAATAC TERM 605 574322 - 574337 + F 87 -8.2 -4.41114 | opp_overlap 574322 574318 574315, overlap 574318 574315 GTTCGAAACAATAAA CCGGGC TGAT GTCCGG TTTATTGTCTAATAC TERM 606 574992 - 575023 + G 86 -5.1 -5.30155 | overlap 574996 GGTTAAAGATAATTC CCCGCTCTACAAG CTATTA CTTGTTGAGTAGG TTTTTTACTTAATAA YP_0535 574597 - 575022 + | transcriptional repressor NsrR TERM 607 576666 - 576677 + G 76 -7.2 -4.36914 | opp_overlap 576665 GATTCTGGCGAATAT CGCG GCGG CGCG TTTTGTGGAAAAACA TERM 608 577608 - 577594 - g 91 -9.2 -4.82901 | GCGGGTGGACAAAAA CGCCCA CGT CGGGCG AAAAAACCGGTAAAC rnr 575263 - 577797 + | exoribonuclease R TERM 609 577831 - 577855 + F 74 -10 -3.08072 | gap 1 TGGTGGTGTGCTACT TGCCGGGCGGC TTTT GTCGCCCG-CA TATAATTTAATTATT spoU 577916 - 578656 + | 23S rRNA (guanosine-2'-O-)-methyltransferase TERM 610 578734 - 578713 - f 75 -8.8 -3.60098 | ACTCCGCAGCCTAAA GCCAACAT CTTTGT ATGTTGGC TCAGACTGCTGACAA TERM 611 578823 - 578797 - f 84 -10.1 -3.82218 | gap 1, opp_overlap 578806, overlap 578798 578813 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 612 578824 - 578798 - f 72 -10.1 -2.88849 | gap 1, opp_overlap 578806, overlap 578797 578813 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT TERM 613 578903 - 578924 + F 71 -3 -5.08088 | opp_overlap 578904, overlap 578904 TGTCAATAACCTCAA ACCAACAT CTTTGT ATGTTGGC TTTTTGTTGGGAATT aidB 579064 - 580707 + | isovaleryl CoA dehydrogenase YP_0539 581090 - 580779 - | hypothetical protein YP_0540 581275 - 582030 + | esterase YP_0541 582105 - 582383 + | hypothetical protein TERM 614 582742 - 582717 - g 70 -9.1 -3.50832 | gap 1, overlap 582709 582715 GGTTAAAGCGAAAGA CGAACGCCGTGA GCG TCACGAC-TTCG CGTCAGAAGCCAATG rpsF 582397 - 582789 + | 30S ribosomal protein S6 priB 582795 - 583115 + | primosomal replication protein N rpsR 583120 - 583347 + | 30S ribosomal protein S18 rplI 583387 - 583839 + | 50S ribosomal protein L9 TERM 615 583860 - 583888 + F 95 -14 -2.57132 | opp_overlap 583865, overlap 583865 GCGGCTGTAACCTGT TAAAACGCCAGC CTAGT GCTGGCGTTTTG CTTGTGCCCAGAAAA TERM 616 583883 - 583865 - f 100 -11.7 -4.11484 | opp_overlap 583865 583860 TGTAACCTGTTAAAA CGCCAGC CTAGT GCTGGCG TTTTGCTTGTGCCCA TERM 617 583865 - 583883 + F 100 -11.7 -4.48987 | opp_overlap 583865, overlap 583860 TGTAACCTGTTAAAA CGCCAGC CTAGT GCTGGCG TTTTGCTTGTGCCCA TERM 618 583904 - 583922 + F 100 -16 -3.07307 | opp_overlap 583904 CTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC TERM 619 583922 - 583904 - f 100 -16 -4.36914 | opp_overlap 583904 CTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC TERM 620 584121 - 584139 + F 100 -13.2 -4.01078 | CCAGGGGGTAATCTG CTCTCCTG ATT CAGGAGAG TTTATGGTCACTTTT YP_0546 584143 - 585165 + | transposase for insertion sequence IS100 TERM 621 585246 - 585232 - g 77 -11.4 -3.3506 | overlap 585223 TGGAAAGCCTTATAA GCGCAG CGC CTGCGC TGTCACAACAGGCAG dnaC_6 585162 - 585944 + | transposase/IS protein tnp 586075 - 586452 + | transposase for the IS1541 insertion element TERM 622 586526 - 586558 + T 100 -11.3 -4.50058 | opp_overlap 586533, overlap 586530 586532 586533 CCTTATAGGCGCATA TGAAAAACCTCCGGC TAT GCCGGAGGATATTTA TTTTGGTTATCGGTA TERM 623 586530 - 586554 + T 100 -9.9 -4.80487 | opp_overlap 586533, overlap 586526 586532 586533 ATAGGCGCATATGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTTTGGTTATC TERM 624 586532 - 586552 + T 100 -12.5 -3.99559 | opp_overlap 586533, overlap 586530 586526 586533 AGGCGCATATGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTTTGGTTA TERM 625 586533 - 586551 + T 100 -16 -2.98108 | opp_overlap 586533, overlap 586532 586530 586526 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTTGGTT TERM 626 586551 - 586533 - T 100 -16 -4.8048 | opp_overlap 586533 586532 586530 586526 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTTGGTT YP_0549 587029 - 586574 - | hypothetical protein oapA 587909 - 587169 - | hypothetical protein fklB 588252 - 588872 + | peptidyl-prolyl cis-trans isomerase TERM 627 588890 - 588922 + T 100 -22.9 -4.44046 | opp_overlap 588897, overlap 588891 CCTTGGTACCGATTA TGCCAAAGGGCGACA GGG TGTCGCCCTTTGGCG TTTATTTACGATAAG TERM 628 588891 - 588921 + T 100 -24.2 -3.25946 | opp_overlap 588897, overlap 588890 CTTGGTACCGATTAT GCCAAAGGGCGACA GGG TGTCGCCCTTTGGC GTTTATTTACGATAA TERM 629 588915 - 588897 - T 100 -14.6 -3.62275 | opp_overlap 588891 588890 ACCGATTATGCCAAA GGGCGACA GGG TGTCGCCC TTTGGCGTTTATTTA YP_0552 589635 - 588970 - | cell morphogenesis/cell wall metabolism regulator TERM 630 589663 - 589719 + r 100 -13.6 -3.47573 | opp_overlap 589656 589663 589670, overlap 589688 TTGAGTAATTATATA TCTATAACATGTATTTATTATACA CCTATAACA TGCATAATAAATGCATGTTATAGA TTGTGATATAACTCC TERM 631 589719 - 589663 - R 100 -15.7 -3.02096 | opp_overlap 589663 589688, overlap 589656 589670 TTGAGTAATTATATA TCTATAACATGTATTTATTATACACCT ATA ACATGCATAATAAATGCATGTTATAGA TTGTGATATAACTCC TERM 632 589688 - 589718 + r 95 -14.3 -2.68223 | opp_overlap 589670 589663, overlap 589663 GTATTTATTATACAC CTATAACATGCAT AATAA ATGCATGTTATAG ATTGTGATATAACTC cpdB 591760 - 589790 - | bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein cysQ 592192 - 592935 + | PAPS (adenosine 3'-phosphate 5'-phosphosulfate) 3'(2'),5'-bisphosphate nucleotidase TERM 633 592955 - 592983 + T 100 -15.3 -2.84812 | opp_overlap 592952 592953, overlap 592944 ATTGCTGCACAAGTT GGTGCAGTTGGTC GAT GACCTGCTGCACC TCTGCTGATGTCAGT YP_0555 593576 - 592938 - | hypothetical protein YP_0556 593836 - 594048 + | hypothetical protein TERM 634 594119 - 594094 - T 77 -10.4 -3.14468 | opp_overlap 594097, overlap 594097 CCTGAGCAGATTTAA TCACGGCCCC AACTCA GGGGCCGTTA TGTTTACCGTGATCA TERM 635 594097 - 594116 + T 100 -12.1 -3.82946 | opp_overlap 594097 594094 GAGCAGATTTAATCA CGGCCCC AACTCA GGGGCCG TTATGTTTACCGTGA TERM 636 594116 - 594097 - T 83 -12.1 -2.77658 | opp_overlap 594097, overlap 594094 GAGCAGATTTAATCA CGGCCCC AACTCA GGGGCCG TTATGTTTACCGTGA YP_0557 595487 - 594156 - | hypothetical protein TERM 637 594836 - 594821 - G 74 -7.6 -4.12738 | GTAGATCAAAGTAAA TCACGT TTTC ACGTGA AGTCATGGAGGAAGG TERM 638 595240 - 595219 - G 71 -5.2 -4.43844 | TCAGGAGCCATAAAA CGCTCAAA AACGAG TTTGAACG AAGGGGAGAAAGCGG msrA 596403 - 595765 - | methionine sulfoxide reductase A TERM 639 595888 - 595914 + g 82 -7.3 -4.68424 | GGCAACCGTAATTTC GCTGGTAATCA CCCGT TGATCACCGGC TTTTTCCATGGCTTG YP_0559 596678 - 598414 + | hypothetical protein YP_0560 598411 - 602328 + | hypothetical protein YP_0561 602331 - 602687 + | hypothetical protein TERM 640 602780 - 602729 - T 100 -9.4 -5.84381 | gap 1, opp_overlap 602729 602746 GCAGTAACAAAAAAA CACCGCACAAGGTAAAC-GGCCCTA TTT TGGGGCCTGTTCACGATAGGCGGTG TTTTTTTATAGGCGA TERM 641 602729 - 602780 + T 100 -7.2 -5.60993 | gap 1, opp_overlap 602729, overlap 602746 GCAGTAACAAAAAAA CACCGCACAAGGTAAAC-GGCCCTA TTT TGGGGCCTGTTCACGATAGGCGGTG TTTTTTTATAGGCGA TERM 642 602746 - 602762 + T 73 -10.1 -3.04144 | opp_overlap 602729, overlap 602729 CCGCACAAGGTAAAC GGCCCTA TTT TGGGGCC TGTTCACGATAGGCG ppa 603332 - 602805 - | inorganic pyrophosphatase TERM 643 603472 - 603492 + r 100 -13.3 -3.40836 | opp_overlap 603472, overlap 603465 GTTAGAAATAAAAAA CAGCGGCTT AAA AGGCCGCTG TTAGCTTATTTTTGA TERM 644 603492 - 603472 - R 100 -11.1 -5.72622 | opp_overlap 603465 603472 GTTAGAAATAAAAAA CAGCGGCTT AAA AGGCCGCTG TTAGCTTATTTTTGA fbp 604650 - 603532 - | fructose-1,6-bisphosphatase TERM 645 603581 - 603591 + g 73 -5.4 -4.63218 | AACCCTTCCGCATCT TCCA CCA TGGA TTTTGTTCCCACGAA TERM 646 604270 - 604260 - G 73 -5.4 -4.72272 | opp_overlap 604260 604258 TTCCGCCATCAAAAA TGAC AAT GTCA TCTTCTTCTTCGGAG mpl 604716 - 606098 + | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- me so-diaminopimelate ligase TERM 647 606200 - 606177 - T 85 -9.6 -4.12188 | overlap 606179 TCATCATCTTGAAAA TATGCCCCAT GTTA ATGGGGCATT GCAGACTGCTGACAA TERM 648 606198 - 606179 - T 93 -12.2 -3.6581 | overlap 606177 ATCATCTTGAAAATA TGCCCCAT GTTA ATGGGGCA TTGCAGACTGCTGAC TERM 649 606289 - 606263 - T 84 -10.1 -3.82218 | gap 1, opp_overlap 606272, overlap 606264 606279 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 650 606290 - 606264 - T 72 -10.1 -2.88849 | gap 1, opp_overlap 606272, overlap 606263 606279 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT YP_0565 606657 - 606394 - | hypothetical protein TERM 651 606999 - 607017 + r 75 -7.4 -4.3129 | opp_overlap 606999 GCGAGGGTGAGATAA TGCGGC ACATAAG GCCGCA TTTTACTGCTCGGTG argR 607516 - 607046 - | arginine repressor mdh 607980 - 608918 + | malate dehydrogenase TERM 652 608968 - 608983 + T 74 -10.4 -2.59431 | overlap 608964 CTGCAAGCGTTACTC GGCCCA TCCA TGGGCC TCGCTTCTGCGAGGC TERM 653 609254 - 609222 - T 95 -7.8 -5.08178 | opp_overlap 609222 ATATAGAGATAAAAA GGGGCTACTG AAAAGAGTACGAA CAGTAGCCCC TGATATTGTAATGAT nlp 609627 - 609352 - | putative regulator for maltose metabolism TERM 654 609760 - 609770 + G 74 -2.6 -5.16969 | AAAAAAATTTAAATG TTTT CTA AAAA TTTCTTTTTTGTGTC YP_0569 609757 - 610158 + | hypothetical protein TERM 655 610227 - 610209 - T 89 -10.3 -3.93236 | opp_overlap 610209 CATTAATGGGATAAA CCCGGAT GGTGA ATCCGGG TTTCTAAATAATTTC TERM 656 610209 - 610227 + T 89 -10.3 -3.96224 | opp_overlap 610209 CATTAATGGGATAAA CCCGGAT GGTGA ATCCGGG TTTCTAAATAATTTC ispB 611226 - 610255 - | octaprenyl diphosphate synthase rplU 611486 - 611797 + | 50S ribosomal protein L21 rpmA 611817 - 612074 + | 50S ribosomal protein L27 TERM 657 612103 - 612125 + F 100 -12 -4.84529 | opp_overlap 612103 TGTAAATAGATGTAA GCCCTGCAAT TTC GTTGCGGGGC TTTTTACATTTCTGG TERM 658 613125 - 613100 - g 79 -6.9 -4.62441 | gap 1, opp_overlap 613096, overlap 613101 TCGGACAGAAATAAA CCTGGTTGCTTT GCA AAAGCAGCC-GG TGAATGATTTACGGA rhaT3 612162 - 613148 + | hypothetical protein obgE 613149 - 614321 + | GTPase ObgE TERM 659 614343 - 614374 + T 100 -9.5 -5.0133 | CAGTTATTCTTTGAA TAAGGGCTGCCAT TTTTTC GTGGTGGCCCTTA TTTTTTGGCAGGGTG basS 615483 - 614416 - | sensor protein BasS/PmrB basR 616142 - 615480 - | DNA-binding transcriptional regulator BasR dacB 617596 - 616148 - | D-alanyl-D-alanine carboxypeptidase/endopeptidase TERM 660 616647 - 616666 + g 70 -2.2 -5.03715 | gap 1 GTTCTGAAGACGGTG TCAG-CGAT CAT ATTGTCTGA TTTTTTCAGCATGAT TERM 661 617719 - 617739 + H 100 -3.9 -6.5058 | CAAAATTGATCCTGA CTTGGGGTT TTT GGCCCTAGG TTTTTTTTTGTTTAT TERM 662 618003 - 617988 - g 72 -4 -4.88918 | gap 1, overlap 617997 CGACTTGAAAGAAAA TGCG-GA ATA TCACGCA GCCCGTGAGCAACAA greA 617854 - 618330 + | transcription elongation factor GreA TERM 663 618416 - 618391 - T 100 -10.5 -4.88405 | opp_overlap 618397, overlap 618392 AAGTTGTAAAGAAAA GTAAAAGGCCG CAAG CGGCCTTTTAT CAGAACAAAGTGCAT TERM 664 618415 - 618392 - T 100 -14 -3.51958 | opp_overlap 618397, overlap 618391 AGTTGTAAAGAAAAG TAAAAGGCCG CAAG CGGCCTTTTA TCAGAACAAAGTGCA TERM 665 618397 - 618410 + T 88 -9.5 -4.36914 | opp_overlap 618392 618391 TAAAGAAAAGTAAAA GGCCG CAAG CGGCC TTTTATCAGAACAAA TERM 666 618436 - 618426 - T 74 -6.8 -4.35483 | opp_overlap 618425 618426 TTTTATCAGAACAAA GTGC ATG GCAC CTTTCTCTAAAACAA YP_0579 618751 - 618458 - | RNA-binding protein rrmJ 618898 - 619527 + | 23S rRNA methyltransferase J TERM 667 619672 - 619690 + G 72 -8.2 -3.83205 | GCGAATCGAATGGCC GTAGAGTG GAT TACTCTAC TTTCATGTCCGACGT hflB 619575 - 621518 + | ATP-dependent metalloprotease TERM 668 621579 - 621562 - f 90 -11.3 -3.71284 | opp_overlap 621562 TTGTGACTAATATAA CCCTAGG CTTG CCTAGGG TTTTTTTGTTGCTAA TERM 669 621562 - 621579 + F 100 -11.3 -5.84381 | opp_overlap 621562 TTGTGACTAATATAA CCCTAGG CTTG CCTAGGG TTTTTTTGTTGCTAA folP 621638 - 622471 + | dihydropteroate synthase TERM 670 623370 - 623380 + G 71 -6.8 -4.24342 | opp_overlap 623369 TAGCCCTGAAAGATC TGGG TAT CCCA TTTGTTCGTGCCAAA glmM 622481 - 623821 + | phosphoglucosamine mutase TERM 671 623854 - 623834 - f 83 -11.1 -3.53761 | TAACCCTTTTTTAAA GGGGGAGAG GCA CTCTTCCCC AAGAAATTACGCTGA secG 624044 - 624379 + | preprotein translocase subunit SecG TERM 672 624459 - 624429 - f 74 -9.9 -3.08603 | opp_overlap 624427, overlap 624428 AAAGAGTTTTAAAAG GGTTGTTGTTACT TGGAC AGTAAAAACAACC AGTTGAATCAGTGCC TERM 673 624694 - 624708 + F 100 -7.2 -5.79526 | opp_overlap 624696 TCCGGCCCCCGCAAC CACTTT CCT AAAGTG TTTTTTTTCAAATGT TERM 674 624806 - 624794 - f 76 -10.5 -3.06501 | GAGAGTTGCACCGAA GCCGC TTT GCGGC AAACAGGGTCCAGTT TERM 675 624823 - 624851 + F 100 -12.5 -3.90744 | opp_overlap 624829 624830, overlap 624830 AACAGGGTCCAGTTG CATAAAGCCCCGA ATT TCGGGGTTTTTTG TTATTTGACAGCAGA TERM 676 624845 - 624829 - f 72 -7.9 -3.87815 | opp_overlap 624823 624830, overlap 624830 GTCCAGTTGCATAAA GCCCCGA ATT TCGGGGT TTTTTGTTATTTGAC TERM 677 624844 - 624830 - f 83 -11.4 -2.92475 | opp_overlap 624823 624830, overlap 624829 TCCAGTTGCATAAAG CCCCGA ATT TCGGGG TTTTTTGTTATTTGA TERM 678 624830 - 624844 + F 100 -11.4 -5.72254 | opp_overlap 624830 624829, overlap 624823 TCCAGTTGCATAAAG CCCCGA ATT TCGGGG TTTTTTGTTATTTGA TERM 679 624873 - 624886 + F 100 -8.1 -5.80248 | GACAGCAGAATCACT GGGCT ATTA AGCCC TTTTTTTATGTCTTG YP_0585 624911 - 625363 + | hypothetical protein nusA 625367 - 626872 + | transcription elongation factor NusA TERM 680 627406 - 627393 - g 76 -3.1 -5.19261 | AAACCGACGAAAAAA CTAAG CCAG CTCAG ACCGATAAAGCACGT infB 626897 - 629575 + | translation initiation factor IF-2 TERM 681 629627 - 629596 - f 81 -10.8 -3.36515 | opp_overlap 629599, overlap 629594 629597 TCTGATTTGCAAATA TCCATTTGGGGGGC CTTG GCCCCCCAAACTGT CTGGAGAATCCAAAT TERM 682 629626 - 629597 - f 95 -14.3 -2.61695 | opp_overlap 629599, overlap 629596 629594 CTGATTTGCAAATAT CCATTTGGGGGGC CTTG GCCCCCCAAACTG TCTGGAGAATCCAAA TERM 683 629599 - 629624 + F 93 -13.3 -2.87931 | opp_overlap 629597 629596 629594 GATTTGCAAATATCC ATTTGGGGGGC CTTG GCCCCCCAAAC TGTCTGGAGAATCCA rbfA 629641 - 630051 + | ribosome-binding factor A truB 630051 - 631025 + | tRNA pseudouridine synthase B TERM 684 631039 - 631022 - f 91 -6.9 -5.56263 | opp_overlap 631025, overlap 631025 AGTAGAAAATAAAAA GTAGGCC ACAC GGCCTGC CTTGCGATCCCGCGA rpsO 631147 - 631416 + | 30S ribosomal protein S15 TERM 685 631452 - 631498 + F 100 -15.4 -3.05384 | gap 1, opp_overlap 631438 631457, overlap 631457 631462 AGGGGCCAAGTTGCA CTGAACC-CCAGATCTTGGAT CTTTTT ATCCATGATCTGGAGGTTCGG TTCAATGAAACACCC TERM 686 631492 - 631457 - f 93 -12.7 -3.06831 | opp_overlap 631457 631452 631462, overlap 631438 CCAAGTTGCACTGAA CCCCAGATCTTGGAT CTTTTT ATCCATGATCTGGAG GTTCGGTTCAATGAA TERM 687 631457 - 631493 + F 77 -10.3 -3.19192 | gap 1, opp_overlap 631438 631457, overlap 631452 631462 CCAAGTTGCACTGAA CC-CCAGATCTTGGAT CTTTTT ATCCATGATCTGGAGG TTCGGTTCAATGAAA TERM 688 631462 - 631472 + F 75 -5.4 -4.88736 | opp_overlap 631457, overlap 631457 631452 TTGCACTGAACCCCA GATC TTG GATC TTTTTATCCATGATC YP_0591 631482 - 632018 + | IS1661 DNA-binding protein TERM 689 632838 - 632820 - g 71 -11 -2.73735 | overlap 632810 632808 632831 AAACAGGCGGAATGA GTCCGGCA GAA TACCGGAC TCAGGTAGAAAAGCA tra5C 632072 - 632857 + | IS1661 transposase TERM 690 635234 - 635197 - g 86 -11.3 -4.0274 | CTGAGCATCAAAGAA GCCACTACTCCTGACGC AGAA GCACCAGAAGCAGCAGC AGAGTAATTAAGTCA pnp 633028 - 635241 + | polynucleotide phosphorylase/polyadenylase TERM 691 635253 - 635284 + F 100 -13.8 -3.48276 | opp_overlap 635250 GTAATTAAGTCATTC CACAGCTCCTTGCT CATT GGTAAGGGGCTGTG TTATCTCAGGGGCGG TERM 692 636130 - 636118 - g 73 -9.1 -3.78934 | opp_overlap 636117 TCTGGGGGACAAGAA CACCG CTT CGGTG CTGTTCAAACTGACG nlpI 635366 - 636250 + | lipoprotein NlpI TERM 693 637228 - 637210 - g 72 -3.8 -4.7497 | CGTACGTACCAAAAA TGCGACCT TGG AAGTAGCA GAAGCCCTTGAGCGT deaD 636437 - 638431 + | ATP-dependent RNA helicase DeaD TERM 694 638483 - 638468 - g 100 -10.4 -4.82855 | opp_overlap 638468 GATTAAACGTAAAAA CCAGCC TTCG GGCTGG TTTTTTTATGGCTAT TERM 695 638468 - 638483 + G 100 -10.4 -5.65177 | opp_overlap 638468 GATTAAACGTAAAAA CCAGCC TTCG GGCTGG TTTTTTTATGGCTAT YP_0596 638451 - 638624 + | hypothetical protein YP_0597 638667 - 639035 + | hypothetical protein hipB1 639059 - 639370 + | putative transcriptional regulatory protein TERM 696 639402 - 639387 - T 100 -10.4 -4.82855 | GATTAAACGTAAAAA CCAGCC TTCG GGCTGG TTCAGACTGCTGACA TERM 697 639492 - 639466 - T 84 -10.1 -3.82218 | gap 1, opp_overlap 639475, overlap 639467 639482 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 698 639493 - 639467 - T 72 -10.1 -2.88849 | gap 1, opp_overlap 639475, overlap 639466 639482 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT TERM 699 639588 - 639573 - T 82 -10.4 -3.72051 | opp_overlap 639573 GTCAACAACCTCAAA CCAGCC TTCG GGCTGG TTTTTTTATGGCGGT TERM 700 639573 - 639588 + T 100 -10.4 -5.61596 | opp_overlap 639573 GTCAACAACCTCAAA CCAGCC TTCG GGCTGG TTTTTTTATGGCGGT YP_0599 640680 - 639625 - | hypothetical protein TERM 701 641603 - 641571 - g 70 -2 -4.9138 | ATTAGCCAAAGAAAA TGGTGTGTC-GCAGCA AGA TGCTGATGACGC-CCA AACCAGCTATCAGCA TERM 702 641655 - 641645 - g 70 -2.4 -5.00884 | opp_overlap 641646 ATGTGGCCGAAAAAA CTGC TGC GCTG GAAACGGCGCGTATC acrA2 641188 - 642348 + | multidrug efflux protein TERM 703 644018 - 644031 + G 73 -5.9 -4.56597 | GTGTGTTGTTTATTC GCCTG CCAA CGGGC TTTTTACCGACCGAA acrB1 642352 - 645477 + | multidrug efflux protein TERM 704 645756 - 645722 - g 81 -13.6 -3.1247 | gap 1 ATTGCCGATATCGAA GCGGCCCG-TGCGCA ATATGG TGTGCAACGGGCCGC CCAGATACCAACGGT TERM 705 645927 - 645909 - g 83 -3 -5.41143 | opp_overlap 645909 645912, overlap 645910 TATTTGGTAAAAAAA GCAGCTTG TCT CATGCTGA ATTTGAAACCTATCT ibeB 645479 - 646885 + | outer membrane efflux lipoprotein TERM 706 647010 - 646966 - T 100 -16 -4.183 | gap 1, opp_overlap 646972 646975, overlap 646972 TTAAGCGTTAATAAA CATG-AATAACAGGGAGGCCA GCAA TGACCTCCCTGTTATTACTTG ATAAGGCAAGGCCGT TERM 707 647003 - 646972 - T 100 -18.2 -3.54382 | opp_overlap 646972 646975, overlap 646966 GTTAATAAACATGAA TAACAGGGAGGCCA GCAA TGACCTCCCTGTTA TTACTTGATAAGGCA TERM 708 646972 - 647003 + T 100 -16 -3.39895 | opp_overlap 646972 646966, overlap 646975 GTTAATAAACATGAA TAACAGGGAGGCCA GCAA TGACCTCCCTGTTA TTACTTGATAAGGCA TERM 709 646975 - 647000 + T 100 -13.3 -3.83844 | opp_overlap 646972 646966, overlap 646972 AATAAACATGAATAA CAGGGAGGCCA GCAA TGACCTCCCTG TTATTACTTGATAAG YP_0603 647925 - 647026 - | hypothetical protein YP_0604 648911 - 647916 - | putative protease TERM 710 648868 - 648842 - G 71 -7.3 -4.11295 | gap 1, opp_overlap 648841 648840, overlap 648832 TCAAACCGATATAAA CCGC-ATCGGCA CCAT TGTCGATTGCGG CCTTTAATGCAGGTA YP_0605 649146 - 649021 - | hypothetical protein YP_0606 649146 - 649748 + | putative lipid carrier protein YP_0607 649742 - 650248 + | putative acetyltransferase YP_0608 650710 - 650423 - | GIY-YIG nuclease superfamily protein TERM 711 650458 - 650474 + g 100 -8 -5.32396 | TTGTCAATAACCTCG GCTGGT CAATC ACCAGC TTTTCTTTTTGCTGT YP_0609 652959 - 650941 - | hypothetical protein TERM 712 651116 - 651102 - G 76 -5.6 -4.75174 | overlap 651104 CATTCAAGTCAAAAA CACAGG TGA CCTGAG CTGCTGGTTGTTGGT YP_0610 654209 - 652983 - | hypothetical protein ugpB1 654767 - 656080 + | putative sugar binding protein TERM 713 656321 - 656345 + G 72 -8.5 -3.95653 | CACGTTGTTATATGT CCTGGTCACCA TGG TGGTGGCCGCG TTTATCGCCTTCTTT malF2 656088 - 656972 + | sugar transport system, permease protein TERM 714 656965 - 656955 - f 77 -4.6 -5.03314 | CTCACCTTGAAAAAA CGGA TCG CCCG TTACTAACCGAGCCG malG1 656991 - 657830 + | sugar transport system, permease protein TERM 715 658192 - 658180 - f 70 -5.5 -4.4773 | TGATATTAACCAAAA GGTCG AAT CAACC GCCGAGTTGCTCGGT TERM 716 658194 - 658206 + F 73 -9.1 -3.5393 | opp_overlap 658192 AGGTCGAATCAACCG CCGAG TTG CTCGG TTTACAAGCGCTGCT TERM 717 658362 - 658343 - f 70 -7.8 -3.60475 | overlap 658346 658354 AACCTGGATGCCAAA CTACGCAC ACAG GTGCGTGG GGAGATCCACTGCAT TERM 718 658793 - 658803 + F 75 -8.2 -3.77209 | overlap 658790 TCTTTTGCAGCACGG GCGG GGG CCGC TTTACCTCTGTATTT TERM 719 659055 - 659069 + G 73 -9.2 -3.67597 | TTTTCACCTCTGCAA CCGGCG TTA CGTCGG TTATTGAGTGAAGCG YP_0615 658947 - 660113 + | hypothetical protein YP_0616 660230 - 660655 + | hypothetical protein YP_0617 660807 - 661445 + | hypothetical protein phnP 662210 - 661458 - | carbon-phosphorus lyase complex accessory protein phnN 662782 - 662201 - | ribose 1,5-bisphosphokinase phnM 663918 - 662782 - | PhnM protein phnL1 664796 - 663915 - | phosphonates transport ATP-binding protein TERM 720 664020 - 664031 + g 71 -7.2 -4.02051 | opp_overlap 664011 664019 664020 GAAAATCCCGACAAT CGCG GCAC CGCG TTGTTTAGCTTCATC TERM 721 664771 - 664746 - G 73 -11.9 -2.52543 | gap 1, opp_overlap 664746 664768 AGTGCCTGCAATCGA GCAGGA-GGGCA GGC CGCCCCTCCTGC ACCTGCGGCTTTGCT TERM 722 664799 - 664811 + H 71 -9.1 -3.30605 | opp_overlap 664797 GCTCAACATCCAACG CCCAC TAC GTGGG TTCCCTTCTTCATCT TERM 723 664844 - 664875 + H 100 -12.4 -3.5393 | TCGGCTTTACGGGCT GGCTTTAACCTACA TCCC TGTAGGTTGACGCC TTTCGCCGACGTCCT YP_0622 664868 - 665026 + | hypothetical protein phnK 665814 - 665023 - | phosphonates transport ATP-binding protein phnJ 666695 - 665814 - | PhnJ protein phnI 667866 - 666688 - | PhnI protein phnH 668495 - 667866 - | carbon-phosphorus lyase complex subunit phnG 668968 - 668492 - | PhnG protein TERM 724 668811 - 668793 - G 87 -8 -4.79352 | overlap 668794 TCACCGAGAATAAAA CGGCGGCC GGT GGCCCCCA TCCGCGCCTGCAATT phnF1 669694 - 668969 - | putative transcriptional regulator YP_0629 669895 - 669719 - | hypothetical protein nrdG 670456 - 670022 - | anaerobic ribonucleotide reductase-activating protein TERM 725 670551 - 670580 + r 74 -9.2 -3.33492 | GGTGACTCAGCCCAT CAGCAGGCCTCG CATTGA CGAGGCCTGAGG TTGTCGCCTACCTAC nrdD 672801 - 670663 - | anaerobic ribonucleoside triphosphate reductase TERM 726 671829 - 671839 + g 76 -6.8 -4.56597 | GTTTTGGGAATACCG CCGT TTT ACGG TTTTTACCCAAGCCC TERM 727 672870 - 672847 - R 78 -10.2 -3.24245 | overlap 672843 TTATCCACAAGGCAA CCCGCAGCAC ATCA GGGCTGCGAG GGGGATGTGGATGCT TERM 728 673030 - 673043 + r 75 -5.3 -4.82901 | TCCCTGTTCAGTACG TCACA GAAT TGTGA TTTTTATGGCGAGGG oppF1 673951 - 673235 - | putative ABC transporter, ATP-binding protein dppD1 674846 - 673938 - | putative ATP-binding component of dipeptide transport system TERM 729 674391 - 674424 + gr 86 -11.7 -3.28712 | opp_overlap 674393, overlap 674393 GGCCAGTGCATTTAA TACCCGTTCATGCGC ATCA GCGCTTGAAAGGGTG TTATGCAGCAACAGA TERM 730 674422 - 674393 - GR 86 -12.1 -3.09327 | opp_overlap 674391 674393 CCAGTGCATTTAATA CCCGTTCATGCGC ATCA GCGCTTGAAAGGG TGTTATGCAGCAACA TERM 731 674393 - 674422 + gr 86 -12.1 -3.21276 | opp_overlap 674393, overlap 674391 CCAGTGCATTTAATA CCCGTTCATGCGC ATCA GCGCTTGAAAGGG TGTTATGCAGCAACA dppC1 675645 - 674809 - | putative transporter, permease protein dppB1 676713 - 675664 - | putative transporter, permease protein TERM 732 676696 - 676665 - G 76 -4.3 -4.94243 | opp_overlap 676665 676667 676670, overlap 676667 676670 GTAAAAAAACCAAAA GATGACGCCGGGA GGGGGT TCCCGGCGTGGTA TTTAATGCTACAGAC TERM 733 676667 - 676694 + g 72 -9.8 -3.48024 | opp_overlap 676665 676667 676670, overlap 676665 676670 AAAAAAACCAAAAGA TGACGCCGGGAG GGGG TTCCCGGCGTGG TATTTAATGCTACAG TERM 734 676670 - 676691 + g 80 -13.7 -2.88215 | opp_overlap 676667 676665 676670, overlap 676667 676665 AAAACCAAAAGATGA CGCCGGGAG GGGG TTCCCGGCG TGGTATTTAATGCTA TERM 735 676691 - 676670 - G 78 -13 -3.01018 | opp_overlap 676670 676667 676665, overlap 676667 676665 AAAACCAAAAGATGA CGCCGGGA GGGGGT TCCCGGCG TGGTATTTAATGCTA TERM 736 678568 - 678552 - H 75 -5.2 -4.79352 | TTAGTGATAATAAAA TATTCC GTAAA GGAATA ATGATGAGGTTATTG TERM 737 678650 - 678676 + H 72 -10.1 -2.88849 | gap 1, opp_overlap 678639, overlap 678645 678651 ACATCCATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCTCTGCC TERM 738 678651 - 678677 + H 84 -10.1 -3.82218 | gap 1, opp_overlap 678639, overlap 678645 678650 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCTCTGCCT ebgC1 679015 - 679473 + | hypothetical protein argI 680787 - 679780 - | ornithine carbamoyltransferase subunit I YP_0639 680999 - 681430 + | hypothetical protein wecD2 682440 - 681937 - | putative acetyltransferase TERM 739 682556 - 682518 - R 100 -14.7 -4.66833 | overlap 682519 GTGCAATGGTAAAAA GCAGGGGCCATGATAGT GAATA ATTATCATGGCCCCTGG TGACGACTGACTGAT TERM 740 682555 - 682519 - R 100 -18.2 -3.39618 | overlap 682518 TGCAATGGTAAAAAG CAGGGGCCATGATAGT GAATA ATTATCATGGCCCCTG GTGACGACTGACTGA valS 685480 - 682583 - | valyl-tRNA synthetase holC 685942 - 685493 - | DNA polymerase III subunit chi TERM 741 685979 - 685962 - R 95 -11.3 -3.80625 | TCTCTACAACGTAAA GGGCACA AAAA TGTGCCC TCAGACTGCTAACAA pepA 687604 - 686093 - | leucyl aminopeptidase YP_0644 687884 - 688978 + | hypothetical protein TERM 742 689596 - 689579 - g 73 -3.4 -5.0095 | gap 1 AAAAAGACAATAAAA CCTGGCG GTTAT CGC-AGG TCGATGAATCTGATT YP_0645 688978 - 690054 + | hypothetical protein TERM 743 690260 - 690275 + F 91 -6.8 -5.47218 | opp_overlap 690260 TAGTATGAAAATTAA GTCACC GCAA GGTGGC TTTTTTTGCCTAAAA TERM 744 691463 - 691484 + G 70 -8.7 -3.57128 | overlap 691458 AAGTTGAAGTCTGTG GCCACGGTT TCAG AACCATGGC TTGTAGTTCATTGAT intB 690406 - 691701 + | integrase TERM 745 691718 - 691742 + F 100 -8 -5.39755 | TAAAAAAAGTTTCTG TAAGGCATGT ATCTG ATATGCCTTA TTTTTTCTAATTGTG TERM 746 692145 - 692179 + G 70 -8 -3.70902 | gap 1 CTACTTAATTGATGG TCAGCAGCGG-GTCA CTTCCT TGACACTGTTGCTGA TTTGCCTGTACCGAG TERM 747 693462 - 693484 + G 83 -9.2 -4.4261 | opp_overlap 693462, overlap 693457 GCAGGAATTTCAAGA TTGGCGCAAT CAT GTTGCGTCAA TTTTACTCTTACCAG YP_0647 691753 - 693765 + | hypothetical protein TERM 748 694753 - 694728 - T 90 -11.3 -3.68619 | TGGAATTTACTGAAA TTACATCAGAG GATG CTCTGATGCAA AACCGCTCAGAGTTA dnaC_7 695700 - 694918 - | transposase/IS protein TERM 749 695616 - 695630 + g 77 -11.4 -3.3506 | overlap 695629 CTGCCTGTTGTGACA GCGCAG GCG CTGCGC TTATAAGGCTTTCCA YP_0650 696719 - 695697 - | transposase for insertion sequence IS100 TERM 750 696741 - 696723 - H 100 -13.2 -4.01078 | AAAAGTGACCATAAA CTCTCCTG AAT CAGGAGAG CAGATTACCCCCTGG tnp_6 696830 - 697288 + | transposase for the IS1541 insertion element TERM 751 697362 - 697394 + T 100 -11.3 -3.9344 | opp_overlap 697369, overlap 697366 697368 697369 CCTTATAGGCGCATA TGAAAAACCTCCGGC TAT GCCGGAGGATATTTA TTTCGTCTTCGCATT TERM 752 697366 - 697390 + T 100 -9.9 -4.56883 | opp_overlap 697369, overlap 697362 697368 697369 ATAGGCGCATATGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTTCGTCTTCG TERM 753 697368 - 697388 + T 100 -12.5 -3.88114 | opp_overlap 697369, overlap 697366 697362 697369 AGGCGCATATGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTTCGTCTT TERM 754 697387 - 697369 - T 100 -16 -4.8048 | opp_overlap 697368 697366 697362 697369 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTCGTCT TERM 755 697369 - 697387 + T 100 -16 -2.91241 | opp_overlap 697369, overlap 697368 697366 697362 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTCGTCT TERM 756 697591 - 697576 - T 100 -11.8 -4.87291 | GATGTCAATTAAAAA CGCGCC CGAA GGCGCG TTACACCGAAATTAG YP_0652 698084 - 697620 - | putative yhbH sigma 54 modulator TERM 757 698286 - 698315 + r 74 -4.9 -4.77757 | opp_overlap 698292, overlap 698288 698292 GTTGAAAACCTAAAT TGAAAACGGCAGC CTGA GCTGCCGTTGGTG TTTTCATTTTTCGGG TERM 758 698288 - 698313 + r 72 -7.5 -3.99386 | opp_overlap 698292, overlap 698286 698292 TGAAAACCTAAATTG AAAACGGCAGC CTGA GCTGCCGTTGG TGTTTTCATTTTTCG TERM 759 698309 - 698292 - R 100 -12.7 -4.37198 | opp_overlap 698292 698288 698286 AACCTAAATTGAAAA CGGCAGC CTGA GCTGCCG TTGGTGTTTTCATTT TERM 760 698292 - 698309 + r 100 -12.7 -3.58476 | opp_overlap 698292, overlap 698288 698286 AACCTAAATTGAAAA CGGCAGC CTGA GCTGCCG TTGGTGTTTTCATTT nrfG1 699068 - 698337 - | outer membrane protein assembly complex subunit YfiO TERM 761 699169 - 699159 - H 75 -8.2 -3.8766 | GCACATTATATTAAA CGGC ATC GCCG TCAAAACCCAACGTT rluD 699204 - 700181 + | 23S rRNA pseudouridine synthase D TERM 762 700219 - 700232 + G 70 -9.5 -3.29144 | GATTGGCCGATGCCT GCCCG CGTC CGGGC TTGTAGCACCACTCG TERM 763 700620 - 700595 - g 71 -10.4 -3.06696 | opp_overlap 700592 700595 GTGTTCTGGAACACA CGGTGGCGCA ATTCAA TGCGGCACCG TCCTCTCTTATGGCT YP_0655 700183 - 700914 + | hypothetical protein TERM 764 702350 - 702337 - g 80 -2.3 -5.41143 | CAGGCCCTAAAAAAA GAGTC AGAT GACGC CAGTAAAAAACGGTT clpB1 701023 - 703617 + | protein disaggregation chaperone TERM 765 703633 - 703650 + T 100 -12.7 -5.80727 | TAGCTGATCCTCTAA GGGGCGA GAAA TCGCCCC TTTTTTGTTGTTTTT TERM 766 707493 - 707475 - T 82 -10.3 -3.57798 | overlap 707488 CATAAGTAACGATAA TGCGGGT GAAAA ACCCGCA CGCCGGAAGACCAAG TERM 767 707953 - 707927 - T 70 -9.4 -2.75844 | opp_overlap 707941 707949, overlap 707926 707929 GGCGTTAGGTGAAAG GACTAGCTCCTG GAG CTGAAGCCAGTC GCAGATACCAGCTGG TERM 768 708000 - 707989 - T 74 -4.4 -5.06816 | ACTGTTTAATAAAAA CACA GCAC TGTG CAAACACGAAAGTGG TERM 769 709112 - 709122 + T 74 -6.8 -4.27316 | opp_overlap 709112 GGCTTAACCTTACAA CACC GAA GGTG TTTTGAATTGAGAGA TERM 770 709351 - 709369 + T 100 -8.1 -5.24989 | opp_overlap 709351 709343 AAATAAAGCCAAGAC CCCATGC CCAAA GCGTGGG TTTTTTGCTGTGTGC TERM 771 709416 - 709436 + T 100 -10.4 -4.8048 | opp_overlap 709413 GCGTTGTAATGATGA CCCCATGC CAAAA GCGTGGGG TTTTTGCTGTGCGCG TERM 772 709482 - 709502 + T 100 -10.4 -4.8048 | opp_overlap 709482 ACGTTGTATTGATAA CCCCATGC CCAAA GCGTGGGG TTTTTGCTGTGCGCG TERM 773 709502 - 709482 - T 71 -8.9 -3.35798 | opp_overlap 709482 ACGTTGTATTGATAA CCCCATGCC CAA AGCGTGGGG TTTTTGCTGTGCGCG TERM 774 709548 - 709568 + T 72 -6.1 -4.34402 | GCGTTGTAATGATGA CCCCATG CCAAAAA CGTGGGG TTTTGCTGTGCGCGA YP_0657 710061 - 709720 - | hypothetical protein TERM 775 710091 - 710107 + r 70 -3.6 -4.78848 | opp_overlap 710091, overlap 710083 AGTGGGAGATGAAAA CCCGCT AATTC ACCGGG TTTTATCTTTAAGAC pssA 711481 - 710123 - | phosphatidylserine synthase YP_0659 714296 - 711654 - | Acyl-CoA synthetase (NDP forming) YP_0660 715088 - 714339 - | hypothetical protein TERM 776 715133 - 715106 - R 75 -8.6 -3.86897 | gap 1, opp_overlap 715130 715131, overlap 715108 715128 CGGACTCCTGAGAAA TAGCGCCATTCTA ATA TAGAATGGC-CCA CGCCCCGACAGAAAA TERM 777 715132 - 715108 - R 89 -11.5 -3.5241 | opp_overlap 715130 715131, overlap 715106 715128 GACTCCTGAGAAATA GCGCCATTCTA ATA TAGAATGGCCC ACGCCCCGACAGAAA trxC 715695 - 715258 - | thioredoxin 2 TERM 778 715919 - 715931 + H 77 -10.5 -3.14132 | opp_overlap 715915 ACATCAGGTAATCTT CGCGC CCT GCGCG TTGGTGGAGAAGACA yfiF 715932 - 717113 + | putative methyltransferase TERM 779 717148 - 717204 + T 100 -13.8 -3.40775 | opp_overlap 717139 717149 717158 717163, overlap 717149 717163 GAGAGACGTTTTAGA ACGGTAAAAATAAAAGGGGGCGCTGA TGAGT TCAGGGCCCCCTTTTTTGTTGACCGC TATTTGGCTAAAAAT TERM 780 717203 - 717149 - T 100 -17.3 -3.3095 | opp_overlap 717149 717148 717163, overlap 717139 717158 717163 AGAGACGTTTTAGAA CGGTAAAAATAAAAGGGGGCGCTGA TGAGT TCAGGGCCCCCTTTTTTGTTGACCG CTATTTGGCTAAAAA TERM 781 717149 - 717203 + T 100 -17.3 -2.64144 | opp_overlap 717139 717149 717158 717163, overlap 717148 717163 AGAGACGTTTTAGAA CGGTAAAAATAAAAGGGGGCGCTGA TGAGT TCAGGGCCCCCTTTTTTGTTGACCG CTATTTGGCTAAAAA TERM 782 717194 - 717158 - T 100 -13.8 -4.6902 | opp_overlap 717149 717148 717163, overlap 717149 717163 TTAGAACGGTAAAAA TAAAAGGGGGCGCTGA TGAGT TCAGGGCCCCCTTTTT TGTTGACCGCTATTT TERM 783 717189 - 717163 - T 100 -13.7 -5.27023 | opp_overlap 717149 717148 717163, overlap 717158 717149 ACGGTAAAAATAAAA GGGGGCGCTGA TGAGT TCAGGGCCCCC TTTTTTGTTGACCGC TERM 784 717163 - 717189 + T 100 -13.7 -5.4505 | opp_overlap 717163 717158 717149, overlap 717149 717148 ACGGTAAAAATAAAA GGGGGCGCTGA TGAGT TCAGGGCCCCC TTTTTTGTTGACCGC emrB 718771 - 717236 - | multidrug resistance protein B emrA 719994 - 718810 - | multidrug resistance protein A TERM 785 719911 - 719931 + gH 84 -2.6 -5.55769 | gap 1 GGCCGTCAGCAACAG CAGTACACG TTTA CGT-TGCTG TTTTTTATTCTGCGG YP_0665 719981 - 720160 + | hypothetical protein emrR 720902 - 720366 - | transcriptional repressor MprA YP_0667 721391 - 721050 - | hypothetical protein azlC 722161 - 721388 - | putative amino acid transporter proP7 723520 - 722321 - | sugar transporter TERM 786 723009 - 722980 - G 86 -15.1 -2.91695 | overlap 722977 723002 723003 GGCAGCGCCAAAGGA CCAGTGCCATGAT AAAC ATCAAGGCACTGG CAACCCAATAAATGG TERM 787 723613 - 723629 + r 78 -9.3 -3.59979 | GAGGCATTTTCGAGC GAGGGCC AAA GGCCCCC TTTGGAATGACAACC YP_0670 724215 - 723748 - | hypothetical protein gatA 725641 - 724244 - | amidase YP_0672 725820 - 725638 - | hypothetical protein YP_0673 725810 - 725968 + | hypothetical protein TERM 788 726933 - 726916 - g 73 -9.1 -3.80877 | overlap 726914 TTACTGCATAAAATA CTGGCAG AAGG CCGCCAG CGGATACATCAAATT rpiR1 726139 - 726984 + | rpiR family transcriptional regulatory protein YP_0675 726986 - 727201 + | hypothetical protein artI2 727312 - 728100 + | putative amino acid ABC transporter, periplasmic protein artM1 728113 - 728781 + | putative amino acid ABC transporter, permease protein artM2 728778 - 729431 + | putative amino acid ABC transporter, permease protein glnQ1 729412 - 730158 + | putative amino acid ABC transporter, ATP-binding protein dnaC_8 731946 - 731164 - | transposase/IS protein TERM 789 731862 - 731876 + g 77 -11.4 -3.3506 | overlap 731875 CTGCCTGTTGTGACA GCGCAG GCG CTGCGC TTATAAGGCTTTCCA YP_0682 732965 - 731943 - | transposase for insertion sequence IS100 TERM 790 732987 - 732969 - H 100 -13.2 -4.01078 | AAAAGTGACCATAAA CTCTCCTG AAT CAGGAGAG CAGATTACCCCCTGG TERM 791 733989 - 733971 - g 71 -11 -2.84504 | overlap 733968 733966 AGTGGTTAAATACGA CCGATGCC GAT GGCATCAG TGTCGCGCAAGCGAT argE1 733490 - 734794 + | allantoate amidohydrolase TERM 792 734880 - 734890 + F 100 -8.2 -4.8622 | overlap 734879 AACGCCAATGACGTC GGGG ATC CCCC TTTTTACTTGACGCC TERM 793 734982 - 734967 - f 73 -9 -3.41359 | overlap 734965 GCCTCAAAATTAATA GCCTCA TCCC TGAGGC TCAGACTGCTGACAA TERM 794 735071 - 735045 - f 84 -10.1 -3.82218 | gap 1, opp_overlap 735054, overlap 735046 735061 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 795 735072 - 735046 - f 72 -10.1 -2.88849 | gap 1, opp_overlap 735054, overlap 735045 735061 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT TERM 796 735170 - 735145 - f 93 -11.9 -3.62046 | overlap 735146 GCACTTTGTCAATAA CCTGAGCCTCA TCCC TGAGGCTCAGC CTACGAGCTAGCATA TERM 797 735169 - 735146 - f 100 -15.4 -2.77013 | overlap 735145 CACTTTGTCAATAAC CTGAGCCTCA TCCC TGAGGCTCAG CCTACGAGCTAGCAT TERM 798 735662 - 735698 + F 82 -2.4 -5.66989 | gap 1, overlap 735659 TCAAATTGCTGTTTG CCGTAAACCTGTGAC GGCAATTA GTC-TAAGTTTACGG TTTTTTTAGTGTTTA hxuB 735883 - 737673 + | putative surface-exposed protein TERM 799 739361 - 739350 - g 76 -7.2 -4.33274 | overlap 739334 739352 CCGATATCACTAAAA CGGC GGGA GCCG ATGCGACGCTGACAT hmwA 737714 - 743446 + | putative adhesin TERM 800 743996 - 743981 - g 70 -9 -3.62478 | TAATGAAGCCGGAAA TGGGTG CTCG CACCCA TTGCGATTCGAGCGA hmwC 743601 - 745454 + | putative accessory processing protein TERM 801 745524 - 745543 + G 71 -7.9 -4.08216 | ACTTCATCGCTTGGT TGCCGAT ATCCCG ATCGGCA TTTTACAGCACATCA TERM 802 745704 - 745720 + G 72 -10.1 -3.44284 | overlap 745702 ACAGCGATTACTCGG GGCGCAG GGT TTGCGCC TGTTGTTGATGGGGC YP_0687 745456 - 746202 + | hypothetical protein TERM 803 746334 - 746309 - T 100 -9 -4.82128 | opp_overlap 746309 746305 TTATTAAACATAAAA CTAAGCCTCC TTAATG GGAGGCTTGG TTGATTATTTCGATA TERM 804 746309 - 746334 + T 93 -11.9 -3.62723 | opp_overlap 746309, overlap 746305 TTATTAAACATAAAA CTAAGCCTCCT TAAT GGGAGGCTTGG TTGATTATTTCGATA fadE 748821 - 746374 - | acyl-CoA dehydrogenase gmhA 749061 - 749642 + | phosphoheptose isomerase TERM 805 750572 - 750551 - g 75 -8.7 -3.91084 | opp_overlap 750551 TGACCGGTAATGAAA CCTGGCACA AAAT TGCACCAGG TGAATTTGCTTTATT YP_0690 749839 - 750618 + | hypothetical protein YP_0691 751335 - 750583 - | hypothetical protein YP_0692 751717 - 751538 - | hypothetical protein TERM 806 751595 - 751579 - G 74 -6.5 -4.28049 | opp_overlap 751588 CGGAAAATGCTAAAA TCACCCG CAG CTGGTGA CCTGCTTGTGTAATG nqrA1 751735 - 753162 + | Na(+)-translocating NADH-quinone reductase subunit A nqrB1 753166 - 754407 + | Na(+)-translocating NADH-quinone reductase subunit B nqrC1 754340 - 755197 + | Na(+)-translocating NADH-quinone reductase subunit C TERM 807 755327 - 755348 + G 79 -8.7 -4.27796 | overlap 755328 ATTAGTGATGACTCT GGCAGTCAC GCTG GTGACTGCG TTTTCGAGTTTCTTC TERM 808 755328 - 755347 + G 77 -12.2 -3.15593 | overlap 755327 TTAGTGATGACTCTG GCAGTCAC GCTG GTGACTGC GTTTTCGAGTTTCTT nqrD1 755190 - 755819 + | Na(+)-translocating NADH-quinone reductase subunit D nqrE1 755820 - 756422 + | Na(+)-translocating NADH-quinone reductase subunit E nqrF 756438 - 757661 + | Na(+)-translocating NADH-quinone reductase subunit F TERM 809 758362 - 758344 - g 74 -4.4 -4.79683 | overlap 758346 AATGGAGAAAATAAA CCTTGGCG TAT CGCCATTG AAAAGCCAGTCGCGG apbE 757642 - 758724 + | thiamine biosynthesis lipoprotein YP_0700 758737 - 758964 + | hypothetical protein TERM 810 759132 - 759092 - T 100 -19.1 -3.32844 | opp_overlap 759093 759097, overlap 759093 759097 TTTTTTATCTGACAA GCAAAGCCCCCGAACGACG CAT CATTGTTCGGGGGCTTTGT TGCTCAATTATTGTC TERM 811 759131 - 759093 - T 100 -22.6 -2.59564 | opp_overlap 759093 759097, overlap 759092 759097 TTTTTATCTGACAAG CAAAGCCCCCGAACGACG CAT CATTGTTCGGGGGCTTTG TTGCTCAATTATTGT TERM 812 759093 - 759131 + T 100 -22.6 -3.2557 | opp_overlap 759093 759092 759097, overlap 759097 TTTTTATCTGACAAG CAAAGCCCCCGAACGACG CAT CATTGTTCGGGGGCTTTG TTGCTCAATTATTGT TERM 813 759127 - 759097 - T 100 -17.6 -4.00124 | opp_overlap 759093 759097, overlap 759093 759092 TATCTGACAAGCAAA GCCCCCGAACGACG CAT CATTGTTCGGGGGC TTTGTTGCTCAATTA TERM 814 759097 - 759127 + T 100 -17.6 -4.26871 | opp_overlap 759097 759093 759092, overlap 759093 TATCTGACAAGCAAA GCCCCCGAACGACG CAT CATTGTTCGGGGGC TTTGTTGCTCAATTA ugpQ1 760155 - 759208 - | hypothetical protein TERM 815 759409 - 759423 + g 74 -4.2 -4.8543 | overlap 759407 759411 TGCGCTAGAACGCCC TTCACC CAA GGTGTA TTTTTCTACAACTTC dinP 760511 - 761569 + | DNA polymerase IV pepD1 763143 - 761683 - | aminoacyl-histidine dipeptidase TERM 816 761805 - 761826 + g 70 -2.2 -5.00616 | overlap 761799 TTGGCCCAATCGACA CCATGTCC ATGTTA GGATAGGG TTTTTTGAACAAACC TERM 817 763826 - 763840 + H 82 -2.1 -5.72053 | gap 1 AATGAGGTTTTTACT TGAGGC TGTA GCC-CA TTTTTTATTTAATTC YP_0704 764141 - 764296 + | hypothetical protein TERM 818 764707 - 764717 + F 70 -2.6 -4.9725 | opp_overlap 764707 CGGAAAAATAAGAAT TAAA TCC TTTA TTTTTGTGTCGGCAT TERM 819 765860 - 765850 - g 78 -4 -5.13016 | opp_overlap 765850 765844, overlap 765844 AATTAAAAGTAAAAA GTAA CGC TTAC TATTTATGTGATAAT lysR3 765018 - 765929 + | LysR family transcriptional regulator TERM 820 766375 - 766353 - T 100 -13.6 -5.26875 | opp_overlap 766374 TTCTGAATTAAAAAA CGGGTATTAT AGA ATAATACCCG CTGATAGAGACGATT YP_0706 767993 - 766389 - | putative carbohydrate-binding protein TERM 821 767978 - 767992 + g 78 -5.8 -4.88258 | overlap 767959 GATGTAGTTGTGCAT TGAAAT GTA ATTTCA TTTTATTATCCTTTT TERM 822 768089 - 768099 + r 77 -4.6 -4.9218 | TGCGCATCCCTCCCG CCCG GAA TGGG TTTTTATAATCACTA proP8 768495 - 768190 - | hypothetical protein TERM 823 768372 - 768382 + g 70 -3.2 -4.89729 | overlap 768370 ATATTGCTGATATCT TCTC TCG GAGG TTTTTAGATTTTGTA gpt 768922 - 769380 + | xanthine-guanine phosphoribosyltransferase TERM 824 769392 - 769421 + F 100 -9.3 -4.69326 | overlap 769397 ATAATTTACTGTTCT TTAAGCGTCCGGT GCCT GCCGGACGTTTCA TTTTCTCTTCAGTAT TERM 825 769397 - 769416 + F 100 -11.4 -4.32571 | overlap 769392 TTACTGTTCTTTAAG CGTCCGGT GCCT GCCGGACG TTTCATTTTCTCTTC frsA 769507 - 770754 + | fermentation/respiration switch protein crl 770814 - 771215 + | DNA-binding transcriptional regulator Crl TERM 826 771271 - 771301 + F 78 -9.1 -3.83205 | CATAAACTGTCCCCA TTACCCCCTTTCT GCACA ATAAAGGGGGTGA TTTCGTATCAAGCCT proB 771392 - 772495 + | gamma-glutamyl kinase TERM 827 773583 - 773600 + G 74 -7.7 -4.1891 | AGTATTTTGTCCGCG CTGTCGA TTCA TCGGCAG TTTATGTTAACGCGA proA 772505 - 773764 + | gamma-glutamyl phosphate reductase TERM 828 773851 - 773837 - f 78 -5.7 -4.7497 | opp_overlap 773848, overlap 773848 CTGATTGATTAAAAA TCGCT AGTAA AGCGA CATGTGGCAATTTGC TERM 829 773848 - 773875 + F 100 -13.6 -5.78622 | gap 1, opp_overlap 773837 773848 AAAATCGCTAGTAAA GCGACATGTGGCA ATT TGCCA-ATGTCGC TTTTTTTTCAAATCA TERM 830 773875 - 773848 - f 100 -13.6 -3.75863 | gap 1, opp_overlap 773848, overlap 773837 AAAATCGCTAGTAAA GCGACATGTGGCA ATT TGCCA-ATGTCGC TTTTTTTTCAAATCA YP_0713 773863 - 774024 + | hypothetical protein TERM 831 774262 - 774296 + G 71 -5.8 -4.29325 | overlap 774264 TGAGACTAATCAGTT TATTTTCGATTTCGGC AGT GTAGAAAACGAAAATG TTTTGGCTCTTGGTG YP_0714 774092 - 774850 + | hypothetical protein YP_0715 775033 - 775302 + | hypothetical protein YP_0716 775280 - 775483 + | hypothetical protein TERM 832 775586 - 775572 - g 83 -2.8 -5.39721 | GCAGCAGATAAAAAA CTCACT AAT ATTGAG ATACAACAAGGGCTG smtA1 775548 - 776069 + | hypothetical protein YP_0718 776531 - 776316 - | hypothetical protein ksgA1 776769 - 777356 + | putative methyltransferase TERM 833 777528 - 777548 + F 75 -3.2 -5.21709 | opp_overlap 777519 AGTAAACCTGTTCAA CCGGCC AATAATAAC GGTCGG TTTTTTGATGTCGAA aroL 777603 - 778127 + | shikimate kinase II YP_0721 778383 - 778553 + | hypothetical protein YP_0722 778617 - 778904 + | hypothetical protein TERM 834 778928 - 778958 + T 86 -11.9 -2.91086 | overlap 778922 778923 TTGAGTTAGCGAGTC TGTCACCCTCTCT ATGCC AGAGGGGGCGACA TATCATCTATCCTTT rdgC 780051 - 779140 - | recombination associated protein TERM 835 780066 - 780090 + H 84 -11.3 -3.14132 | TAGTGTTATCCTTGG CTCGGGCGCGC CTG GAGCGCGCGAG TTAATCAACGCAGGG TERM 836 780317 - 780335 + H 88 -9.6 -4.25104 | TATCCAGATCACAGT TATCCTGC CTA GCAGGGTA TTTTGATCGCGAGAA nagC1 780384 - 781298 + | fructokinase sbcC2 785448 - 781759 - | ATP-dependent dsDNA exonuclease TERM 837 784222 - 784251 + g 82 -6.5 -4.81083 | overlap 784213 784245 GGCATAGTCTGCTAG CTGTTGCAGGC GTTGATGG GTCTGCAATAG TTTTTGCTCATTCAG TERM 838 785073 - 785089 + g 71 -6.5 -4.13767 | TATCGCGGACCTTAT CGGCCAA GAT TTTGCCG TTTTCGCATAAGGCC sbcD 786689 - 785445 - | exonuclease subunit SbcD phoB 786927 - 787646 + | phosphate regulon transcriptional regulatory protein TERM 839 787697 - 787714 + G 71 -5.5 -4.45696 | CTTATCATGGAAAAC GCTGGCT TTAG AGCTGGC TCTTTTTTGTTTGCC TERM 840 787999 - 788016 + G 76 -11.3 -3.25304 | overlap 787987 787986 788005 AGTCACTGCCTGATG CCGTGGT TATC ACCACGG TTGATGGTAATATTT TERM 841 788907 - 788917 + G 78 -2.4 -5.29885 | ATGAGTGAAATTGGT CTGG GTA CCCG TTTTATTTTTACCTT phoR 787671 - 788987 + | phosphate regulon sensor protein TERM 842 789831 - 789813 - g 79 -11 -3.54307 | AACAGTGGTGTTAAA TCACTGCC GTT GGCAGCGA GTGGGCAAGATTTTG pstS1 789009 - 790073 + | phosphate binding protein brnQ 790547 - 791866 + | branched-chain amino acid transport system II carrier protein TERM 843 791891 - 791911 + F 100 -11.1 -4.72272 | overlap 791905 AATAGAGTATTTTTA GCCACGGTT AAT ATCCGTGGC TTTTTGCTGAAAAAA TERM 844 792741 - 792758 + G 77 -11.3 -3.36492 | opp_overlap 792734, overlap 792741 GGAATCAAGTGGGCA CGAACGG TAGT CCGTTCG TTCTGACCTTCCAGC ansP1 791942 - 793333 + | putative proline-specific permease TERM 845 793375 - 793401 + F 100 -6.5 -5.85244 | opp_overlap 793375 GATAATCGATACAAA GCCGGGGTACA GTTCA TCTGTCCCGGC TTTTTTCTTTTAATT TERM 846 794238 - 794254 + G 80 -2.9 -5.26918 | overlap 794239 CGATAGCGGGCCTGA TTGGGTC GCG GACCAAG TTTTTTATCAGATCT malZ 793894 - 795723 + | maltodextrin glucosidase TERM 847 795760 - 795795 + F 87 -4.7 -5.52986 | opp_overlap 795774 795778, overlap 795778 GATAACTCACTAGAG CAGCTCAGGGATAAC AATTCA GTGATAACTGAGCTG TTTTTTTGCTCCAGT fabG2 795878 - 796558 + | short chain dehydrogenase TERM 848 796627 - 796598 - f 95 -12.3 -3.35813 | opp_overlap 796598 796597 796600 CTCCACTCTAATGAA TATCCCCCATCAA TAGT TCGATAGGGGATA ATATTTTCAGATACT TERM 849 796794 - 796782 - f 75 -10.5 -2.76468 | overlap 796779 TAGTAGCCAATAGCA GCCCC TGC GGGGC GACGGACATCATTGG YP_0735 798398 - 798673 + | hypothetical protein TERM 850 798749 - 798760 + G 70 -3 -4.89852 | opp_overlap 798757 GAGAGGGTTTTTAAT TCAA CGTA TTGA TTTTTATCAATATAA YP_0736 798699 - 798830 + | hypothetical protein TERM 851 798878 - 798855 - T 100 -12.5 -5.44119 | opp_overlap 798855 TCTAGGGGAAAAAAA GCCAGTCAG AGTGAA CTGACTGGC TTGATAGCCCCCGAG TERM 852 798855 - 798878 + T 93 -12.5 -3.14132 | opp_overlap 798855 TCTAGGGGAAAAAAA GCCAGTCAG AGTGAA CTGACTGGC TTGATAGCCCCCGAG ahpC 799521 - 798919 - | putative alkyl hydroperoxide reductase subunit c TERM 853 799643 - 799653 + r 73 -5.4 -4.67641 | GATAGTTTTTGCCTA TCGT TAA ACGA TTTTAGTTTTGCAGT YP_0738 800448 - 799840 - | hypothetical protein queA 800624 - 801694 + | S-adenosylmethionine:tRNA ribosyltransferase-isomerase TERM 854 801778 - 801752 - f 81 -7.4 -4.68593 | GTGATCAGGCAAAAA CAACATCAGA CTGTTTC TCTGATGCTG GAGGTTATGTGAAGT TERM 855 801824 - 801809 - g 80 -2.4 -5.38249 | opp_overlap 801819, overlap 801811 ACGAATTACAAAAAA CGGATG GGCG CGCCCG CCGTGGTCGGCTGGT TERM 856 801819 - 801840 + G 70 -9.3 -3.57462 | opp_overlap 801809 801811, overlap 801833 AAAAACGGATGGGCG CGCCCGCCG TGGT CGGCTGGTG TTTGAGCGTGGCGTG TERM 857 802275 - 802302 + G 73 -9.1 -3.74872 | gap 1, opp_overlap 802269 GATGGAAATGTCACT GCGCTGGGCTGC CCGTA GCCGC-CAGCGC TTTGATGAGCTGAAT tgt 801787 - 802911 + | queuine tRNA-ribosyltransferase TERM 858 803097 - 803079 - g 78 -9.6 -3.90112 | opp_overlap 803078 TCCGGCTCAAGGAAA CAGCATGA CCT CCATGCTG ATCATGCTGGTAGTA yajC 803023 - 803358 + | preprotein translocase subunit YajC TERM 859 803525 - 803495 - g 77 -10.5 -3.53091 | gap 1 ATCCGGCTGTTCAAA TCACTGGTGCGCGA GGAA TCGC-CGCCAGTGA GACAACGCTGGTCCA secD 803386 - 805233 + | preprotein translocase subunit SecD secF 805244 - 806212 + | preprotein translocase subunit SecF TERM 860 806272 - 806244 - f 71 -8.9 -3.24924 | opp_overlap 806247, overlap 806242 806246 806247 GTTCGATGTATAAGA TAGCCCTGAAACT GTT AGTTTCAGGGTTT TTTGTGCCCAGAAAA TERM 861 806270 - 806246 - f 84 -11.5 -3.18945 | opp_overlap 806247, overlap 806244 806242 806247 TCGATGTATAAGATA GCCCTGAAACT GTT AGTTTCAGGGT TTTTTGTGCCCAGAA TERM 862 806247 - 806269 + F 100 -15 -5.24129 | opp_overlap 806246 806244 806242 806247 CGATGTATAAGATAG CCCTGAAACT GTT AGTTTCAGGG TTTTTTGTGCCCAGA TERM 863 806269 - 806247 - f 100 -15 -2.51045 | opp_overlap 806247, overlap 806246 806244 806242 CGATGTATAAGATAG CCCTGAAACT GTT AGTTTCAGGG TTTTTTGTGCCCAGA TERM 864 806288 - 806306 + F 100 -16 -3.07307 | opp_overlap 806288 TTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC TERM 865 806306 - 806288 - f 100 -16 -4.36914 | opp_overlap 806288 TTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC v1 806368 - 806877 + | transposase for the IS1541 insertion element TERM 866 806951 - 806983 + F 100 -11.3 -4.43501 | opp_overlap 806958, overlap 806955 806957 806958 CCTTATAGGCGCATA TGAAAAACCTCCGGC TAT GCCGGAGGATATTTA TTTTATCAGTAAATT TERM 867 806955 - 806979 + F 100 -9.9 -4.7878 | opp_overlap 806958, overlap 806951 806957 806958 ATAGGCGCATATGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTTTATCAGTA TERM 868 806957 - 806977 + F 100 -12.5 -3.99938 | opp_overlap 806958, overlap 806955 806951 806958 AGGCGCATATGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTTTATCAG TERM 869 806976 - 806958 - f 100 -16 -4.8048 | opp_overlap 806958 806957 806955 806951 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTTATCA TERM 870 806958 - 806976 + F 100 -16 -2.98878 | opp_overlap 806958, overlap 806957 806955 806951 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTTATCA YP_0745 807175 - 807870 + | hypothetical protein TERM 871 807948 - 807966 + G 79 -11.8 -3.26807 | opp_overlap 807946, overlap 807946 CGAACGATAGAGAGT CAGACTGA AAA TCAGTCTG TGGTTTTTAAATCAT TERM 872 808359 - 808345 - g 82 -8.6 -4.54608 | TAAAAGAAACAGAAA CCAGTA AAT TACTGG ATGCGAGCATCAAAG YP_0746 807903 - 808496 + | hypothetical protein YP_0747 808567 - 809016 + | transcriptional regulator NrdR ribD 809166 - 810275 + | bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribH 810411 - 810881 + | riboflavin synthase subunit beta TERM 873 810992 - 810976 - g 71 -5.1 -4.57569 | opp_overlap 810979, overlap 810979 GCAGTTGTCTAAAAA CGACATC GCT GATGTTG AATTACAGTTCCTGT TERM 874 811064 - 811104 + G 70 -3.3 -4.88918 | opp_overlap 811079, overlap 811066 GAATTGCTGTCAGGG GTTGCGGTTAATGCAGC ATCTCTG GATGCATTAATGGCACC TTTTCTTTCCCGTCA nusB 810902 - 811318 + | transcription antitermination protein NusB TERM 875 811530 - 811496 - f 100 -21.8 -2.84059 | opp_overlap 811498 811502, overlap 811498 811502 GATATACATTAACGA TATAAATTAAGGCCGG TAT CCGGCCTTAATTTATA TATCAGTTAACATTT TERM 876 811528 - 811498 - f 100 -20 -2.96235 | opp_overlap 811498 811502, overlap 811496 811502 TATACATTAACGATA TAAATTAAGGCCGG TAT CCGGCCTTAATTTA TATATCAGTTAACAT TERM 877 811498 - 811528 + F 100 -20 -2.95091 | opp_overlap 811498 811496 811502, overlap 811502 TATACATTAACGATA TAAATTAAGGCCGG TAT CCGGCCTTAATTTA TATATCAGTTAACAT TERM 878 811524 - 811502 - f 100 -16.4 -4.14541 | opp_overlap 811498 811502, overlap 811498 811496 CATTAACGATATAAA TTAAGGCCGG TAT CCGGCCTTAA TTTATATATCAGTTA TERM 879 811502 - 811524 + F 100 -16.4 -4.15061 | opp_overlap 811502 811498 811496, overlap 811498 CATTAACGATATAAA TTAAGGCCGG TAT CCGGCCTTAA TTTATATATCAGTTA thiL 811559 - 812548 + | thiamine monophosphate kinase pgpA 812541 - 813026 + | phosphatidylglycerophosphatase A TERM 880 813065 - 813094 + F 95 -12.3 -3.28712 | opp_overlap 813069, overlap 813069 AGAGAGACTATCACG TAAAGGCATAACC CACG GGCTATGCCTTTA TTGTGCCCAGAAAAC TERM 881 813090 - 813069 - f 84 -10.9 -3.6959 | opp_overlap 813065 813069 AGACTATCACGTAAA GGCATAACC CACG GGCTATGCC TTTATTGTGCCCAGA TERM 882 813069 - 813090 + F 86 -8.7 -4.30719 | opp_overlap 813069, overlap 813065 AGACTATCACGTAAA GGCATAACC CACG GGCTATGCC TTTATTGTGCCCAGA TERM 883 813109 - 813127 + F 100 -16 -3.07307 | opp_overlap 813109 ATTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC TERM 884 813127 - 813109 - f 100 -16 -4.37092 | opp_overlap 813109 ATTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC tnp_7 813189 - 813698 + | transposase for the IS1541 insertion element TERM 885 813772 - 813804 + T 100 -11.3 -4.13973 | opp_overlap 813779, overlap 813776 813778 813779 CCTTATAGGCGCATA TGAAAAACCTCCGGC TAT GCCGGAGGATATTTA TTGTTTCTGATATCT TERM 886 813776 - 813800 + T 100 -9.9 -4.63952 | opp_overlap 813779, overlap 813772 813778 813779 ATAGGCGCATATGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTGTTTCTGAT TERM 887 813778 - 813798 + T 100 -12.5 -3.91443 | opp_overlap 813779, overlap 813776 813772 813779 AGGCGCATATGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTGTTTCTG TERM 888 813779 - 813797 + T 100 -16 -2.93239 | opp_overlap 813779, overlap 813778 813776 813772 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTGTTTCT TERM 889 813797 - 813779 - T 100 -16 -4.8048 | opp_overlap 813778 813776 813772 813779 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTGTTTCT dxs 815736 - 813877 - | 1-deoxy-D-xylulose-5-phosphate synthase ispA 816812 - 815892 - | geranyltranstransferase TERM 890 816456 - 816429 - G 78 -6.2 -4.90471 | gap 1 AGCCAAAATAGAAAA GGCCAGCGTTTGC AGT GCAT-CACCGGCC AAAATAGCGTGGGCC xseB 817071 - 816817 - | exodeoxyribonuclease VII small subunit TERM 891 817025 - 817043 + g 72 -8.2 -3.96148 | TCACTGAGTGATGTT TCAAAGCT GGC GGCTTTGA TTTCTGGTGAAGCGG YP_0757 817153 - 817323 + | hypothetical protein thiI 817421 - 818872 + | thiamine biosynthesis protein ThiI TERM 892 818988 - 818960 - T 73 -7.3 -4.1021 | opp_overlap 818960 818960 CCCGATAATTATAAA TTCCTGGCGGCAA CAC TAGCTGCCAGGCA ATTTCTTCCGCCTTT TERM 893 818960 - 818989 + T 76 -7.9 -4.19974 | gap 1, opp_overlap 818960, overlap 818960 CCCGATAATTATAAA TT-CCTGGCGGCAA CAC TAGCTGCCAGGCAA TTTCTTCCGCCTTTT TERM 894 818960 - 818988 + T 72 -9.5 -3.109 | opp_overlap 818960, overlap 818960 CCCGATAATTATAAA TTCCTGGCGGCAA CAC TAGCTGCCAGGCA ATTTCTTCCGCCTTT thiJ1 819536 - 818940 - | hypothetical protein apbA 820404 - 819493 - | 2-dehydropantoate 2-reductase YP_0761 820636 - 821127 + | nucleotide-binding protein TERM 895 821192 - 821221 + T 71 -8.5 -3.44622 | opp_overlap 821192 GGTATAACGACTAAA GGGGCAACGGCTT TTTC ATGTCTTTGCCCC TTAATTCTGGCCCTA proP9 822621 - 821251 - | putative transporter TERM 896 823030 - 823068 + r 100 -11 -4.48299 | opp_overlap 823034, overlap 823034 AACAGGGAACAAATA CAAAGTGGCTGGCAAGAG CGA TTCCTGCCAGCCACTTGA TTTATTTCACTCTCA TERM 897 823064 - 823034 - R 100 -17.7 -4.46072 | opp_overlap 823030 823034 GGGAACAAATACAAA GTGGCTGGCAAGA GCGAT TCCTGCCAGCCAC TTGATTTATTTCACT TERM 898 823034 - 823064 + r 100 -16.2 -3.76486 | opp_overlap 823034, overlap 823030 GGGAACAAATACAAA GTGGCTGGCAAGAG CGA TTCCTGCCAGCCAC TTGATTTATTTCACT cyoE 824007 - 823099 - | protoheme IX farnesyltransferase cyoD 824332 - 824000 - | cytochrome o ubiquinol oxidase subunit IV cyoC 824946 - 824332 - | cytochrome o ubiquinol oxidase subunit III TERM 899 824645 - 824658 + g 71 -6.7 -4.15854 | AAGGTGAAGCCCAAC CAGGT ATTG ACCTG TTTTACACTCCCTTT TERM 900 824883 - 824923 + g 77 -12 -3.17714 | gap 2, overlap 824889 824895 ATACTTTCGTCGCTC CCGCATCGTGATGCCCATGC TCT GCATGGGC-T-ACGTTGTGG TTAGTCAGAGTTTCA TERM 901 824889 - 824917 + g 70 -9 -3.54029 | gap 2, overlap 824883 824895 TCGTCGCTCCCGCAT CGTGATGCCCATGC TCT GCATGGGC-T-ACG TTGTGGTTAGTCAGA TERM 902 824895 - 824913 + g 81 -14.6 -2.63614 | overlap 824889 824883 CTCCCGCATCGTGAT GCCCATGC TCT GCATGGGC TACGTTGTGGTTAGT cyoB 826927 - 824936 - | cytochrome O ubiquinol oxidase subunit I TERM 903 825864 - 825841 - G 71 -6 -4.32804 | ACAACCAATTGAAAA TTTTCACCCC TGTT GGGATGGAAA TGATCATCGTGGCAA cyoA 827888 - 826932 - | cytochrome o ubiquinol oxidase subunit II TERM 904 827001 - 827016 + g 74 -2.6 -5.09173 | gap 1, overlap 826994 827009 827013 CATATCCATGCCTTT TGGC-AT GTC ATGGCCA TTTTTTGGCATGTTC TERM 905 828016 - 828031 + r 80 -9 -3.95674 | ACTTTATGTTAAGGG GGTCAC AGAT GTGACC TTATTTGGCAATTTT TERM 906 828211 - 828246 + r 72 -7.1 -4.04295 | opp_overlap 828211 828209 828213, overlap 828213 AGGTAAATTAAAATA T-ATTTCGAGGTGTCCT AAAT AGG-CACCTCGGAATCA TTTAGTTATAGTTAG TERM 907 828243 - 828213 - R 73 -9.1 -3.51998 | gap 1, opp_overlap 828211 828213, overlap 828211 828209 GTAAATTAAAATATA TTTCGAGGTGTCCT AAAT AGG-CACCTCGGAA TCATTTAGTTATAGT TERM 908 828213 - 828243 + r 83 -11.3 -3.05266 | gap 1, opp_overlap 828213 828211 828209, overlap 828211 GTAAATTAAAATATA TTTCGAGGTGTCCT AAAT AGG-CACCTCGGAA TCATTTAGTTATAGT YP_0768 829025 - 828258 - | hypothetical protein TERM 909 829179 - 829165 - R 85 -2.1 -5.75342 | TTTTTTTAAAAAAAA CATGC AACAA ACATG AAAAGTTGTGATTTA TERM 910 829294 - 829267 - R 86 -3.4 -5.59879 | GATAAACACAAAAAA GCCAGTGC ACAAACTGAACA GCACCGGC TTTATGTCACTTATG ampG 830795 - 829317 - | muropeptide transporter TERM 911 829667 - 829649 - G 73 -3 -4.91194 | overlap 829651 AGAATAAATAGAAAA GTGGCC AGCCATG GGCCTC TACAAACCAACCGGC TERM 912 830589 - 830571 - G 73 -5.9 -4.58395 | overlap 830551 CCGACGCCCTAAAAA GGACGGC GTGTA GCGGTCC ATCAGCGGGGACCAA TERM 913 830808 - 830836 + r 73 -8.2 -3.65991 | gap 1, opp_overlap 830806 CATAATAAATCTACC TGCTCTGCCGCAA GGTA TCG-GGCAGAGCA TTCTGTTGAGCAACT YP_0770 831491 - 830913 - | hypothetical protein bolA1 831840 - 832160 + | transcriptional regulator BolA TERM 914 832227 - 832252 + F 91 -10.5 -4.12532 | opp_overlap 832233, overlap 832229 832233 AGTAGATGAGAATTT TACAAACGGCT CTAG GGCCGTTTGTG TTTCTGTATAGGCGA TERM 915 832229 - 832250 + F 84 -10.9 -3.65996 | opp_overlap 832233, overlap 832227 832233 TAGATGAGAATTTTA CAAACGGCT CTAG GGCCGTTTG TGTTTCTGTATAGGC TERM 916 832233 - 832246 + F 73 -5.9 -4.44187 | opp_overlap 832233, overlap 832229 832227 TGAGAATTTTACAAA CGGCT CTAG GGCCG TTTGTGTTTCTGTAT YP_0772 832301 - 832504 + | hypothetical protein tig 832577 - 833881 + | trigger factor TERM 917 833899 - 833921 + F 95 -9.2 -4.4959 | overlap 833901 TTTTTCAGCGCATGA TGCTGGATGG GAC CCATTCAGTA TTTTGATTGATTAAG TERM 918 833901 - 833919 + F 81 -9.6 -3.85043 | overlap 833899 TTTCAGCGCATGATG CTGGATGG GAC CCATTCAG TATTTTGATTGATTA TERM 919 833936 - 833961 + F 100 -11.1 -5.50723 | opp_overlap 833936 ATTTTGATTGATTAA GCCCGTCGCCA TTAT TGGTCACGGGC TTTTTCTTTTGGTAA TERM 920 834515 - 834528 + G 76 -6.7 -4.56597 | opp_overlap 834515 TGGCTAACCTAATCA CAGCA CAGA TGCTG TTTTTGGAAGCCGAG clpP 834343 - 834966 + | ATP-dependent Clp protease proteolytic subunit clpX 835172 - 836443 + | ATP-dependent protease ATP-binding subunit TERM 921 836495 - 836477 - f 100 -13.2 -3.44527 | opp_overlap 836477 CAGTTAGTATGACAA TGGGGGAT TTT ATCCCCCA TTTCTTTTTCCTCGC TERM 922 836477 - 836495 + F 100 -13.2 -4.91852 | opp_overlap 836477 CAGTTAGTATGACAA TGGGGGAT TTT ATCCCCCA TTTCTTTTTCCTCGC TERM 923 836581 - 836595 + F 72 -10 -2.7752 | opp_overlap 836571, overlap 836580 TGAAACTCGTGATGA CTCGTG TTT CACGAG ATTTCCAGTAATCTG TERM 924 837090 - 837080 - g 100 -5.4 -5.83226 | opp_overlap 837084 AACTGAACAAAAAAA TTCC GCC GGAA GTGCTGGCTTCGCTG lon 836584 - 838992 + | DNA-binding ATP-dependent protease La TERM 925 839026 - 839053 + F 72 -6.3 -4.25873 | opp_overlap 839026 ATTGATAAAACTAAT GCTGGTAAGTG AAATCC TGCTTGCCAGC TATTTTTTGTGCCGC hupB 839210 - 839482 + | transcriptional regulator HU subunit beta TERM 926 839567 - 839586 + F 100 -10 -5.86332 | opp_overlap 839559 839566 839567 AAGGTAAGATACAAG GCGCATCG TTTA TGATGCGC TTTTTTTTCGCTTAG TERM 927 839586 - 839567 - f 70 -9.3 -2.81609 | opp_overlap 839567, overlap 839559 839566 AAGGTAAGATACAAG GCGCATC GTTTAT GATGCGC TTTTTTTTCGCTTAG TERM 928 840936 - 840926 - g 74 -4.6 -4.81083 | opp_overlap 840923 CTTAAGCAGGAAAAA GCGC TTG ACGC TTATTATGCGCTACA ppiD 839783 - 841669 + | peptidyl-prolyl cis-trans isomerase (rotamase D) TERM 929 841727 - 841704 - f 100 -15.4 -4.68384 | opp_overlap 841708, overlap 841708 ACCGATGTAATAAAA GAAAGGTCGC TTTG GCGACCTTTC GCATATCTGTGATCT TERM 930 841723 - 841708 - f 100 -10.4 -4.88795 | opp_overlap 841708, overlap 841704 ATGTAATAAAAGAAA GGTCGC TTTG GCGACC TTTCGCATATCTGTG TERM 931 841708 - 841723 + F 82 -10.4 -3.66139 | opp_overlap 841708 841704 ATGTAATAAAAGAAA GGTCGC TTTG GCGACC TTTCGCATATCTGTG TERM 932 841946 - 841931 - g 74 -2.4 -5.07107 | overlap 841933 841942 TAAAGTCTCAAAAAA GTCGCC TAAT AGCGCC GCAGATAACGGCGCT comEA 841809 - 842255 + | hypothetical protein TERM 933 842376 - 842419 + F 83 -8.8 -4.08945 | gap 1, opp_overlap 842376 842377 AAGTTGGTAAATCAA GCCGCCAGGC-GGTGCTGGCC ATC GGTAGGTATTGGTCTGGCGGC TTTTACCAACATAAT fcbC1 842591 - 843016 + | hypothetical protein YP_0781 843800 - 843102 - | queuosine biosynthesis protein QueC oppA1 845768 - 844065 - | hypothetical protein TERM 934 844258 - 844276 + g 74 -2.4 -5.19212 | overlap 844259 GGCGCGCTTTCTATC TGCTGA ATGAAGG TCAGCG TTTTTTGCTGCTGGT TERM 935 844825 - 844836 + g 71 -5.8 -4.29326 | ATGCGAACCGGATGC TGGC AACT GCCA TTTGTTGAATTTACC cof1 845873 - 846694 + | putative haloacid dehalogenase-like hydrolase TERM 936 846714 - 846729 + T 100 -6.1 -5.8187 | ATAGCTATTAGCCAG CCGGA GAACCA TCCGG TTTTTTTCTTCCGTA TERM 937 846746 - 846782 + T 100 -10.3 -4.74013 | TTTTTTCTTCCGTAG GCGGTTTGTCAGT GTTCATGCCTA GCTGACAAACCGC TTTTATCTCTTTGAA cysK1 847946 - 846906 - | putative pyridoxal-phosphate dependent protein TERM 938 847593 - 847582 - G 73 -5.8 -4.43844 | opp_overlap 847592, overlap 847584 GCATGATCGACAAAA TGGC AACG GCCA CCGTAGAAGGTGATT lrp1 848072 - 848533 + | transcription regulator AsnC TERM 939 848738 - 848755 + GF 71 -8.4 -3.42996 | opp_overlap 848735 TTCTGCAATTAATTC CGCCCA AGTTGG TGGGCG TTATAGTGGATGATA TERM 940 848792 - 848806 + GF 70 -7.2 -3.76125 | CAAAACAGATGTCCA CCAATA TGT TATTGG TTTGGATTGGCGTGA TERM 941 849247 - 849228 - gf 93 -12.2 -3.61398 | opp_overlap 849224 TTCTTTGCTTAATAA TCAGGCTC AAGA GAGCCTGA CCAGTATTCGCATGA TERM 942 850189 - 850176 - gf 74 -2.3 -5.12707 | TGAAATTTTAAAAAA CCTAC GCGA GTGGG GCGAACAGCGTACCG mdlA 848635 - 850401 + | putative multidrug transporter membrane\ATP-binding components TERM 943 851983 - 851968 - gf 73 -3.2 -5.0538 | opp_overlap 851968 851970, overlap 851970 GGTGATTCGAAAAAA TACCAC GCTG GTGGTT ATTGCTCATCGCCTT mdlB1 850367 - 852217 + | putative multidrug transporter membrane\ATP-binding components TERM 944 852226 - 852247 + F 100 -13.7 -4.22554 | GAGTTAAGCAGCACG CGTGGGGTG ATGT CGCCCCACG TTATTTATTGACTCA TERM 945 852833 - 852808 - g 74 -4.1 -5.00138 | gap 1 TACCCAAAGTAAAAA TTGAT-ATCGCC ATC GCCGATGATCAA TTAGACGAAGTGATT glnK 852570 - 852917 + | nitrogen regulatory protein P-II amtB 852999 - 854294 + | ammonium transporter TERM 946 854503 - 854458 - T 72 -7.5 -4.04089 | opp_overlap 854463 854465 854468 854470, overlap 854465 854468 AAAAATACATAATAA TGATGAACTACAGGGGCGATG GTGA CATCGCCCCTGTGCTATTTCA TTGATTCATCAACTG TERM 947 854463 - 854498 + T 100 -12.6 -4.01419 | opp_overlap 854458 854465 854468, overlap 854465 854468 854470 TACATAATAATGATG AACTACAGGGGCGATG GTGA CATCGCCCCTGTGCTA TTTCATTGATTCATC TERM 948 854465 - 854496 + T 100 -15.2 -3.59031 | opp_overlap 854458 854465 854468, overlap 854463 854468 854470 CATAATAATGATGAA CTACAGGGGCGATG GTGA CATCGCCCCTGTGC TATTTCATTGATTCA TERM 949 854495 - 854465 - T 100 -16.3 -3.34242 | gap 1, opp_overlap 854465 854463 854468 854470, overlap 854458 854468 CATAATAATGATGAA CTACAGGGGCGATG GTGA CATCGCCCCTGT-G CTATTTCATTGATTC TERM 950 854468 - 854493 + T 100 -19.1 -2.906 | opp_overlap 854465 854458 854468, overlap 854465 854463 854470 AATAATGATGAACTA CAGGGGCGATG GTGA CATCGCCCCTG TGCTATTTCATTGAT TERM 951 854493 - 854468 - T 100 -19.1 -2.8293 | opp_overlap 854468 854465 854463 854470, overlap 854465 854458 AATAATGATGAACTA CAGGGGCGATG GTGA CATCGCCCCTG TGCTATTTCATTGAT TERM 952 854470 - 854491 + T 100 -15.9 -2.9955 | opp_overlap 854468 854465 854458, overlap 854468 854465 854463 TAATGATGAACTACA GGGGCGATG GTGA CATCGCCCC TGTGCTATTTCATTG tesB 855441 - 854554 - | acyl-CoA thioesterase II TERM 953 855250 - 855266 + g 74 -6.5 -4.41616 | AAATGAGTGAACAGT CCGTTCT GCG GGGACGG TTTGTTTCGCAGCAT TERM 954 855836 - 855822 - g 77 -11.4 -3.44146 | opp_overlap 855818 855816 CGGTCGCACAATCAA CGGTCC ATG GGACCG TGAATATTCGTGAAC YP_0791 855671 - 856192 + | putative lipoprotein YP_0792 856873 - 856328 - | putative 6-O-methylguanine DNA methyltransferase family protein TERM 955 857199 - 857210 + r 79 -3 -5.27335 | TTGTCGTGAACGCTC TCTA TCAG TAGA TTTTTATTTCCGGCA TERM 956 857269 - 857285 + r 76 -6.6 -4.46652 | AAAATAAGATTCCTC CCATTC TGAAC GAATGG TTTGATTTTTATTTA ymoA 857808 - 857605 - | hemolysin expression-modulating protein YP_0794 858225 - 857857 - | hypothetical protein YP_0795 858737 - 858384 - | hypothetical protein TERM 957 858533 - 858517 - G 70 -8.1 -3.71745 | opp_overlap 858515, overlap 858515 CAAGCATTGAAAATA TACCAAT TAT ATTGGTA AGTCATTGAATACTG TERM 958 858551 - 858561 + g 76 -5.4 -4.8048 | overlap 858553 858553 TCATTGAATACTGGT TCTC TTT GAGA TTTTTAATCTCAAGA TERM 959 859518 - 859490 - R 88 -6.7 -5.24551 | gap 1, opp_overlap 859490 GCAAATGAATAAAAA GGCCCGTTG-GC GTTAGT GCACAAAGGGCC TTTTGGGGACTGATG TERM 960 859490 - 859518 + r 73 -7.4 -4.10161 | gap 1, opp_overlap 859490 GCAAATGAATAAAAA GGCCCGTTG-GCG TTAG TGCACAAAGGGCC TTTTGGGGACTGATG rpmJ 859754 - 859611 - | 50S ribosomal protein L36 rpmE2 860030 - 859770 - | 50S ribosomal protein L31 type B TERM 961 860183 - 860168 - R 100 -11.8 -5.1356 | opp_overlap 860168 GCTCAGCAATAAAAA GGCCGC TTGC GCGGCC TTTAGTATGAAATGA TERM 962 860168 - 860183 + r 100 -11.8 -3.83998 | opp_overlap 860168 GCTCAGCAATAAAAA GGCCGC TTGC GCGGCC TTTAGTATGAAATGA acrB2 863368 - 860216 - | multidrug efflux protein TERM 963 863242 - 863281 + g 85 -12.3 -3.78775 | TGGCGGCAATTGTAA TTGCCGGTGGCGCAATG GTCGGA TATTGCGCTACTGGTAA TTTCATGATCGCAAG acrA3 864572 - 863385 - | multidrug efflux protein TERM 964 864543 - 864561 + g 78 -6 -4.77438 | TACCAGAATTGCAGC CAGAGG CATTACC CCTCTG TTTTTGCTCATAGAT TERM 965 864830 - 864858 + G 77 -9.5 -3.74747 | overlap 864833 TCTTACCGATATTGC TATCGCTGCGGGT GTA ACCCGAGGCGCTA TTTACTGGCACTTCA TERM 966 864833 - 864855 + G 70 -11.2 -2.66873 | overlap 864830 TACCGATATTGCTAT CGCTGCGGGT GTA ACCCGAGGCG CTATTTACTGGCACT acrR2 864717 - 865373 + | DNA-binding transcriptional repressor AcrR dsrE2 865386 - 865739 + | hypothetical protein aefA 865978 - 869397 + | potassium efflux protein KefA YP_0803 869938 - 869771 - | hypothetical protein priC 870633 - 870097 - | primosomal replication protein n'' TERM 967 870225 - 870239 + g 74 -7.8 -4.21343 | CAACTAACAAACTCT GCCGAC CCA GTTGGC TTTCTCTGTCTTGGA TERM 968 870786 - 870801 + H 76 -7.6 -4.15222 | opp_overlap 870785 TGGTCGGCACTACAT GCGTTA ATGA TAACGC TTTCTTGACGAAAGT YP_0805 870834 - 871214 + | hypothetical protein apt1 871453 - 872016 + | adenine phosphoribosyltransferase TERM 969 872166 - 872180 + F 75 -5.7 -4.58424 | GTTAAGGTATTCCAG CCAGA CAAAC TCTGG TTTTATATCGTCATA TERM 970 874044 - 874003 - g 100 -10 -5.58179 | overlap 874009 874042 GACCACAACAAAAAA GAATGAGCCGGCGGCGCC AGGAAA AGCGCGGCCGGCAAACTC AGCACTGGAGCGTTT TERM 971 874038 - 874009 - g 86 -14.2 -3.2756 | overlap 874003 AACAAAAAAGAATGA GCCGGCGGCGCC AGGAAA AGCGCGGCCGGC AAACTCAGCACTGGA TERM 972 874147 - 874121 - g 79 -7.3 -4.46675 | overlap 874138 ACGGAAGAGAAGAAA CCAGCGAAAAA AGAAG CTTATCGCTGG ACCGCGAAAAATCAA dnaX 872672 - 874648 + | DNA polymerase III subunits gamma and tau TERM 973 874777 - 874765 - g 76 -3.4 -5.17353 | AGATGCAGGAAAAAA TGCA GCAGA TGCA GGAAGAAGTCGCCAA TERM 974 875012 - 874981 - g 74 -3.6 -4.98672 | CGCAAAAAGAGAAAA TGGCCTCTGTATCC AATG GGATGCAATTGCCA CCAGGCTTTAAGATG YP_0808 874704 - 875036 + | hypothetical protein recR 875036 - 875641 + | recombination protein RecR YP_0810 875656 - 875814 + | hypothetical protein TERM 975 876031 - 876062 + G 74 -9.6 -3.57792 | opp_overlap 876029, overlap 876021 GATGGCGAACTGAGA GTGCGTTTATCTTT TGAT AAAGAGAAACGTAC TTTAACCCTGAGTGA htpG 875833 - 877707 + | heat shock protein 90 TERM 976 877720 - 877748 + F 91 -6.8 -5.56673 | gap 1, opp_overlap 877720 TAATCGATAAAAAAA CACCCTTGTTCAA CGTA TTGC-CAAGGGTG TTTTTTATTGTACCT TERM 977 877748 - 877720 - f 100 -6.8 -5.66684 | gap 1, opp_overlap 877720 TAATCGATAAAAAAA CACCCTTGTTCAA CGTA TTGC-CAAGGGTG TTTTTTATTGTACCT adk 877934 - 878578 + | adenylate kinase TERM 978 878594 - 878624 + F 100 -17 -3.59979 | opp_overlap 878601, overlap 878587 878586 TTCTGGATGGCCTTA TAGCTAAGGCGGTT TAA GGCCGCCTTAGCTA TTTCAAGTAAGAAGG hemH 878668 - 879630 + | ferrochelatase TERM 979 880148 - 880160 + F 80 -2.7 -5.53288 | CTTTTTTGTTTCTAT TTTAG TCA CTGAA TTTTTTTGACTTAAG TERM 980 880792 - 880806 + G 85 -7.8 -4.90266 | opp_overlap 880792 CTTTTACGAATTGAA GGTCCT CAA GGGACC TTTTTCGTTCGTGAA ddhD 880228 - 881217 + | CDP-6-deoxy-delta-3,4-glucoseen reductase TERM 981 881233 - 881218 - f 72 -6.2 -4.25256 | GTGCCATCAAAATAA CTTTGA GAGA TCAAAG TAATACGTAATGGAG ddhA 881243 - 882028 + | glucose-1-phosphate cytidylyltransferase TERM 982 882578 - 882613 + GF 75 -10.4 -2.81045 | gap 1, opp_overlap 882575, overlap 882575 882573 TCCAGCGAACTATGG CCAGCATGGCACTGCCG TAG CGACAGTGC-GTGCGGG TAATGTTATCGGTGG wcaG1 881964 - 883106 + | putative CDP-D-glucose-4,6-dehydratase ddhC 883124 - 884437 + | putative CDP-4-keto-6-deoxy-D-glucose-3-dehydratase TERM 983 884448 - 884463 + F 100 -9 -5.58454 | opp_overlap 884447 884448 884450 TTTAACAGGAGCAAG GAGGCA ACAC TGCCTC TTTTTTTAATATGAA prt 884534 - 885331 + | paratose synthase TERM 984 886459 - 886407 - g 84 -2 -5.64006 | gap 1, opp_overlap 886454 ATGCAATGAAAAAAA TGGGAGTTGCAAATGATG-AAGATA TTGT TTTCTTGCATCACAAGCGTCTCCCA TGGGGTAATGTAGTA hemY 885332 - 886615 + | hypothetical protein TERM 985 887869 - 887907 + F 100 -15.7 -4.2535 | overlap 887905 ATCGTTATTTTCTGG TGGACTGATAATATTAT TATCC ATAATGTTATCAGTCCA TTTTAAATATGGTGT TERM 986 890130 - 890118 - g 100 -4.9 -5.95286 | AGTAAAAATAAAAAA TATAG AAG CTATA AAATTAAAAATCCCC TERM 987 890215 - 890225 + G 83 -5.4 -5.09762 | TATATTACTGATGAT GAAC CTG GTTC TTTTTATATTACGAT wbyJ 889135 - 890277 + | putative mannosyltransferase TERM 988 890639 - 890657 + F 75 -6 -4.63863 | opp_overlap 890643, overlap 890643 TCCCATATTTTCTAT TACAGCAC CCA GTGCTATA TTCTTTTTCTATTAC TERM 989 891153 - 891165 + F 77 -6.3 -4.67755 | CGCACTGAATAATTC TGCAA TGC TTGCA TTTTTCCCTGACTAT wbyK 891708 - 892757 + | putative mannosyltransferase wcaG2 893901 - 894866 + | putative nucleotide di-P-sugar epimerase or dehydratase TERM 990 896801 - 896786 - g 70 -4.7 -4.60924 | opp_overlap 896786 GAAACCTTTGAAAAA CAGCA ATGTGA TGCTG TATATGGTGACTTAC TERM 991 896898 - 896919 + G 76 -4.4 -4.96848 | overlap 896901 AAAAAATGAAGTATG GTTGGATG CCTCCC CATCCTAC TTTTTATATGAAACG wbyL 896468 - 897211 + | glycosyltransferase manB1 897216 - 898589 + | phosphomannomutase wzz 898637 - 899788 + | ferric enterobactin transport protein FepE TERM 992 899806 - 899842 + F 74 -6.6 -4.39426 | gap 1, opp_overlap 899810, overlap 899810 TTTAAACGAATTTAT C-TAACGGCTGGGTGAG GTTT CTCATCTGGCCGTTCTG TTTTATCACCCTGTA TERM 993 899810 - 899837 + F 100 -12 -4.02581 | opp_overlap 899810, overlap 899806 AACGAATTTATCTAA CGGCTGGGTGAG GTTT CTCATCTGGCCG TTCTGTTTTATCACC TERM 994 900848 - 900859 + G 71 -7.2 -4.03413 | overlap 900841 TGTTATGTACCGCAG GCCC CAGC GGGC TTTATATGGCGGGAT gsk 899992 - 901296 + | inosine-guanosine kinase TERM 995 901316 - 901350 + T 100 -13.6 -5.06816 | opp_overlap 901318 901319, overlap 901319 GTAGACGCGGGATAT AAGTCAGGGCCAGCAT AGT AAGCTGGCCCTGATTG TTTTTATTACAGAGT TERM 996 901348 - 901318 - T 100 -14 -3.49102 | opp_overlap 901316 901319, overlap 901319 AGACGCGGGATATAA GTCAGGGCCAGCAT AGT AAGCTGGCCCTGAT TGTTTTTATTACAGA TERM 997 901319 - 901347 + T 100 -17.5 -4.63592 | opp_overlap 901319 901318, overlap 901316 GACGCGGGATATAAG TCAGGGCCAGCAT AGT AAGCTGGCCCTGA TTGTTTTTATTACAG TERM 998 901347 - 901319 - T 100 -17.5 -2.6914 | opp_overlap 901316 901319, overlap 901318 GACGCGGGATATAAG TCAGGGCCAGCAT AGT AAGCTGGCCCTGA TTGTTTTTATTACAG rosB 903084 - 901393 - | putative cation:proton antiport protein TERM 999 902052 - 902041 - G 82 -7.2 -4.68908 | opp_overlap 902040 CCCAGCCAAAATAAA GGCG AACT CGCC GATTTGTGCCAAACT rosA 904533 - 903319 - | putative membrane efflux protein TERM 1000 903741 - 903726 - G 70 -2.6 -5.00196 | CCGCAAATAAGAAAA CAAATA GGTG TATCTG GGCACTTTGTACCGA YP_0835 906858 - 906574 - | hypothetical protein TERM 1001 906979 - 907005 + r 72 -10.1 -2.88849 | gap 1, opp_overlap 906968, overlap 906974 906980 ACATCCATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCTCTGCC TERM 1002 906980 - 907006 + r 84 -10.1 -3.82218 | gap 1, opp_overlap 906968, overlap 906974 906979 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCTCTGCCT TERM 1003 907069 - 907083 + r 73 -7.2 -4.10437 | overlap 907057 TTGTCAGCAGTCTGA TGAGTT TTA AACTCA TTCTTTCCTTCATAG ebsC 907638 - 907150 - | hypothetical protein TERM 1004 907866 - 907887 + r 100 -10.9 -5.87996 | AAATTCCTCTTTGAC TGGCCGGTA GTGA TATCGGCCA TTTTTTTATTGATTG YP_0837 908702 - 907893 - | hypothetical protein TERM 1005 909209 - 909170 - R 100 -17.4 -3.2614 | gap 1, opp_overlap 909162, overlap 909171 CATTTTGGATATCAA CGCTCAATGGCGCACAAAA CGA TATTGTGCGCCATTGAG-G TCACTGAAAGCATTT TERM 1006 909209 - 909171 - R 100 -17.6 -2.5547 | opp_overlap 909162, overlap 909170 ATTTTGGATATCAAC GCTCAATGGCGCACAAAA CGA TATTGTGCGCCATTGAGG TCACTGAAAGCATTT zntA1 912108 - 909223 - | copper exporting ATPase TERM 1007 910330 - 910306 - G 75 -10.7 -3.45118 | overlap 910308 GCAGGCGATAATTAA CACCGTGGTGG CCA CCACCAGGGTA TAGACCAACTGGGGT TERM 1008 910328 - 910308 - G 76 -11.1 -3.29593 | overlap 910306 AGGCGATAATTAACA CCGTGGTGG CCA CCACCAGGG TATAGACCAACTGGG TERM 1009 910951 - 910987 + g 70 -4.9 -4.59773 | overlap 910952 910953 CCAGGCCGCACCTGT CCCCAGAGCGACCAAGG TAT CCATGGTCGCACTGCCA TTTTTCAGGCTGACC TERM 1010 910953 - 910985 + g 73 -11.9 -2.61004 | overlap 910952 910951 AGGCCGCACCTGTCC CCAGAGCGACCAAGG TAT CCATGGTCGCACTGC CATTTTTCAGGCTGA TERM 1011 911602 - 911617 + g 71 -6.8 -4.15222 | opp_overlap 911612, overlap 911603 ATCAGAAACCGTACT TGTGGC TAAA GCCACG TTTGTTGCCGGAACT TERM 1012 912355 - 912343 - g 91 -5.5 -5.40474 | ATGTTGCGAAAAAAA CCGGT TTA ACCAG CAAAGCCATTCGTTT TERM 1013 912402 - 912387 - g 100 -4.6 -6.13503 | opp_overlap 912389, overlap 912389 TATGAAGAAAAAAAA CTGGTG ACGC CACCTG TTCGCACGGATAACG TERM 1014 912453 - 912484 + G 100 -13.8 -4.14739 | gap 1, opp_overlap 912452 912450 AAACATATTGAAGAG CTCACGTTGCTGCGC CAG GCGCGGCAA-GTGGG TTTTACACTGGATGA cueR 912315 - 912734 + | putative regulatory protein TERM 1015 912748 - 912793 + T 100 -13.5 -3.80114 | opp_overlap 912755, overlap 912752 912754 912755 912785 AATACGCTGCCGTGA TAAATAACCCGAATCACCTAC CAGA GTAAGTGATTCGGGCTGTTTG TTTACTGCCTTGCTG TERM 1016 912752 - 912789 + T 100 -12.1 -4.5123 | opp_overlap 912755, overlap 912748 912754 912755 912785 CGCTGCCGTGATAAA TAACCCGAATCACCTAC CAGA GTAAGTGATTCGGGCTG TTTGTTTACTGCCTT TERM 1017 912754 - 912787 + T 100 -12.5 -3.85603 | opp_overlap 912755, overlap 912752 912748 912755 912785 CTGCCGTGATAAATA ACCCGAATCACCTAC CAGA GTAAGTGATTCGGGC TGTTTGTTTACTGCC TERM 1018 912755 - 912786 + T 100 -16 -2.90639 | opp_overlap 912755, overlap 912754 912752 912748 912785 TGCCGTGATAAATAA CCCGAATCACCTAC CAGA GTAAGTGATTCGGG CTGTTTGTTTACTGC TERM 1019 912786 - 912755 - T 100 -18.2 -4.06419 | opp_overlap 912754 912752 912748 912755 912785 TGCCGTGATAAATAA CCCGAATCACCTAC CAGA GTAAGTGATTCGGG CTGTTTGTTTACTGC YP_0840 913292 - 912843 - | hypothetical protein hflC2 914209 - 913295 - | hypothetical protein TERM 1020 914353 - 914331 - R 100 -13.4 -4.52703 | overlap 914320 GAAAGCAGCATAAAA CTGCGCAGGA TTG CCCCGCGCAG TAGCAAATGATGGTA YP_0842 915273 - 914404 - | putative thioredoxin TERM 1021 915088 - 915058 - G 71 -7.7 -4.07647 | gap 2 AGAGCGTAAACCAAA TTGCGACGC-C-ACC ATG GGTTGTGCATCGCAA TCGACACGGGCCAGA TERM 1022 915221 - 915188 - G 70 -3.2 -4.8048 | opp_overlap 915206 CGTTCAGACCAAAAA TAGAACAACACAGG AACTGA CATGGATTGTTCTA TGGCTTGGTGCAGGT fabG3 916126 - 915350 - | short chain dehydrogenase TERM 1023 916419 - 916448 + rH 86 -5.7 -5.26316 | gap 1, opp_overlap 916419, overlap 916426 916427 TGATTGGTAAGCGAA GGGATTACCGCACT TTT AGTGCGCTT-TCCC TTTTTTCTAGCCTGA TERM 1024 916427 - 916441 + rH 73 -10 -3.03344 | opp_overlap 916419, overlap 916426 916419 AAGCGAAGGGATTAC CGCACT TTT AGTGCG CTTTCCCTTTTTTCT tesA 917181 - 916513 - | multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1 phnL2 917119 - 917805 + | putative ABC transporter ATP-binding protein YbbA TERM 1025 918024 - 918047 + G 73 -10.2 -3.24422 | opp_overlap 918017, overlap 918023 918022 GAAGCGAAGCAGCAG GGGCTGGCGG TTAG CCGCCAACTC TCATTTTTGACCATG TERM 1026 918369 - 918352 - g 76 -7.7 -4.38712 | gap 1 CTGATGTCGAGAAAA CCGG-TGC GGT GCAACCGG GTAGCCGTTTGACTT YP_0846 917790 - 920231 + | putative permease TERM 1027 920244 - 920268 + T 86 -9.9 -4.04491 | overlap 920257 TAGTGGATTTTATTC GCGGGCAGC AGCAGAG GCCGCCCGC TTCTTGTTATAACTT purK 921339 - 920275 - | phosphoribosylaminoimidazole carboxylase ATPase subunit purE 921860 - 921336 - | phosphoribosylaminoimidazole carboxylase catalytic subunit YP_0849 921880 - 922089 + | hypothetical protein YP_0850 922878 - 922156 - | UDP-2,3-diacylglucosamine hydrolase TERM 1028 922677 - 922658 - G 71 -6.4 -4.36914 | opp_overlap 922661, overlap 922661 TTCCCGTGGATAAAA TAACAGGG CACC CCCTGTTG TTGGAGTGATTTCAG TERM 1029 922674 - 922661 - G 79 -8.1 -4.30995 | opp_overlap 922661, overlap 922658 CCGTGGATAAAATAA CAGGG CACC CCCTG TTGTTGGAGTGATTT TERM 1030 922661 - 922674 + g 70 -8.1 -3.67134 | opp_overlap 922661 922658 CCGTGGATAAAATAA CAGGG CACC CCCTG TTGTTGGAGTGATTT TERM 1031 922833 - 922817 - G 86 -9.4 -4.5538 | opp_overlap 922817, overlap 922810 ATAAAATGCAGAAAA CCGGCA GTGAT TGCCGG TTCCTGAACGCTGAG ppiB 923383 - 922889 - | peptidyl-prolyl cis-trans isomerase B (rotamase B) TERM 1032 924531 - 924545 + G 71 -7.8 -4.03413 | TCTGAAGCAGGCACG CGCTTC ACT GGAGCG TTTATATACCGCGCT TERM 1033 924566 - 924554 - g 70 -10.5 -2.87931 | TGGAGCGTTTATATA CCGCG CTG CGCGG TACTGATGCTAACGC cysS 923548 - 924978 + | cysteinyl-tRNA synthetase TERM 1034 925174 - 925144 - f 100 -9.1 -5.56568 | gap 1, opp_overlap 925144 925146, overlap 925146 ATAGTACTAAAAAAA TTGCGGTT-CTGGT GTTT ACCAGTAACCGCGA TTTTTTTGTGCCCAG TERM 1035 925144 - 925174 + F 100 -11.3 -5.60993 | gap 1, opp_overlap 925144 925146, overlap 925146 ATAGTACTAAAAAAA TTGCGGTT-CTGGT GTTT ACCAGTAACCGCGA TTTTTTTGTGCCCAG TERM 1036 925172 - 925146 - f 83 -11.7 -2.94304 | gap 1, opp_overlap 925144 925146, overlap 925144 AGTACTAAAAAAATT GCGGTT-CTGGT GTTT ACCAGTAACCGC GATTTTTTTGTGCCC TERM 1037 925146 - 925172 + F 83 -11.7 -2.96801 | gap 1, opp_overlap 925146 925144, overlap 925144 AGTACTAAAAAAATT GCGGTT-CTGGT GTTT ACCAGTAACCGC GATTTTTTTGTGCCC TERM 1038 925194 - 925212 + F 100 -16 -3.07307 | opp_overlap 925194 TTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC TERM 1039 925212 - 925194 - f 100 -16 -4.36914 | opp_overlap 925194 TTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC tnp_8 925274 - 925783 + | transposase for the IS1541 insertion element TERM 1040 925861 - 925885 + T 100 -9.9 -4.46854 | opp_overlap 925864, overlap 925863 925864 ATAGGCGCATATGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTGTTCAATAG TERM 1041 925863 - 925883 + T 100 -12.5 -3.83566 | opp_overlap 925864, overlap 925861 925864 AGGCGCATATGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTGTTCAAT TERM 1042 925864 - 925882 + T 100 -16 -2.89055 | opp_overlap 925864, overlap 925863 925861 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTGTTCAA TERM 1043 925882 - 925864 - T 100 -16 -4.8048 | opp_overlap 925863 925861 925864 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTGTTCAA TERM 1044 925901 - 925915 + T 83 -11.4 -3.02263 | opp_overlap 925900 TTTATTGTTCAATAG GCCAGC AAT GCTGGC TATTACAACGGCTAT YP_0854 926142 - 925930 - | hypothetical protein folD 927023 - 926157 - | bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase TERM 1045 927365 - 927349 - R 85 -7.2 -4.89567 | GCTTAAAATACAAAA CCCGCC ATTTA GACGGG TCAGGTAGTGATTTA YP_0857 927560 - 927378 - | putative regulatory protein YP_0858 928019 - 927819 - | hypothetical protein YP_0859 928780 - 928133 - | hypothetical protein TERM 1046 928702 - 928743 + g 70 -10.3 -2.91702 | opp_overlap 928707, overlap 928707 ATTCAGGGAGCCATA AAAAATGGCCGTAAGCTAA ATCA TTAACTTCCGGCCATTTTA ATATTTTATCGTGTT TERM 1047 928738 - 928707 - G 100 -12.4 -5.28176 | opp_overlap 928707 928702 GGGAGCCATAAAAAA TGGCCGTAAGCTAA ATCA TTAACTTCCGGCCA TTTTAATATTTTATC TERM 1048 928707 - 928738 + g 91 -10.2 -4.58236 | opp_overlap 928707, overlap 928702 GGGAGCCATAAAAAA TGGCCGTAAGCTAA ATCA TTAACTTCCGGCCA TTTTAATATTTTATC YP_0860 929103 - 928765 - | hypothetical protein YP_0862 929637 - 929882 + | hypothetical protein YP_0863 929822 - 930055 + | hypothetical protein pgsA1 930282 - 930884 + | putative CDP-alcohol phosphatidyltransferase cdsA1 930877 - 931806 + | putative phosphatidate cytidylyltransferase plsC1 931816 - 932448 + | putative acyltransferase TERM 1049 932489 - 932507 + G 74 -9.6 -3.64716 | opp_overlap 932479, overlap 932487 932492 AGGCATGTTCACCGC CAGCGATG AAA CATCGTTG TATTTTCGCCACTGG pldB1 932445 - 934208 + | hypothetical protein pgpB1 934201 - 935520 + | putative dual specificity phosphatase TERM 1050 935576 - 935596 + G 79 -7.5 -4.58236 | TTTCGCCTTATTAAC GCTACCACC GCT GGTGCTGGC TTTTAATCTTTTGTA YP_0869 935502 - 935903 + | hypothetical protein YP_0870 936000 - 936305 + | hypothetical protein TERM 1051 936487 - 936504 + T 86 -7.7 -4.61231 | gap 1, opp_overlap 936486 936487, overlap 936488 GCTGAAATCGAATAC CGGG-AGC AGG GCTTCCCG TTTTTGGGGGTCTAA dnaC_9 937454 - 936672 - | transposase/IS protein TERM 1052 937370 - 937384 + g 77 -11.4 -3.3506 | overlap 937383 CTGCCTGTTGTGACA GCGCAG GCG CTGCGC TTATAAGGCTTTCCA YP_0872 938473 - 937451 - | transposase for insertion sequence IS100 TERM 1053 938495 - 938477 - H 100 -13.2 -4.01078 | AAAAGTGACCATAAA CTCTCCTG AAT CAGGAGAG CAGATTACCCCCTGG TERM 1054 938732 - 938698 - H 70 -10.1 -2.52464 | gap 1 TCTTCTGCTAACGTA GGC-ACTTGCCCACCA ATTT TAGCGGGCAAGTCACC GACAATTTCATCCGA YP_0874 939107 - 939295 + | hypothetical protein TERM 1055 939537 - 939501 - T 79 -6.8 -4.69664 | gap 1, opp_overlap 939504 939507, overlap 939504 TATATCACGTAAAAA CAATAAGGCG-ACATGA TTAA TCATATTCGCCTTATTT TACAATGCATTGACT TERM 1056 939534 - 939504 - T 87 -8.5 -4.4521 | gap 1, opp_overlap 939504 939507, overlap 939501 ATCACGTAAAAACAA TAAGGCG-ACATGA TTAA TCATATTCGCCTTA TTTTACAATGCATTG fabA 940079 - 939561 - | 3-hydroxydecanoyl-(acyl carrier protein) dehydratase lonB 941899 - 940148 - | putative Lon protease TERM 1057 941121 - 941132 + g 76 -5.8 -4.65916 | opp_overlap 941121 941120 GCATCGGCAGATAAG GCAG GGAG CTGC TTTTGTTGCAATAGG TERM 1058 941833 - 941805 - G 70 -4.4 -4.61231 | TGATAGGCTGAAAAA GCAACAGGCTCC AATTG GGAGGCAGTAGC AAATAACGCTTCATA TERM 1059 942185 - 942173 - g 76 -4.8 -5.0133 | TATTTGGTCAAAAAA CACC GTGAA GGTG AAGCCATTACCCGCC YP_0877 942071 - 942565 + | hypothetical protein TERM 1060 942660 - 942628 - T 100 -11.3 -4.04149 | opp_overlap 942635, overlap 942632 942634 942635 GAATCACAGGATAAA TAAATATCCTCCGGC ATA GCCGGAGGTTTTTCA TATGCGCCTATAAGG TERM 1061 942656 - 942632 - T 100 -9.9 -4.60949 | opp_overlap 942635, overlap 942628 942634 942635 CACAGGATAAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCATATGCGCCTAT TERM 1062 942654 - 942634 - T 100 -12.5 -3.90309 | opp_overlap 942635, overlap 942632 942628 942635 CAGGATAAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 1063 942635 - 942653 + T 100 -16 -4.8048 | opp_overlap 942634 942632 942628 942635 AGGATAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 1064 942653 - 942635 - T 100 -16 -2.93101 | opp_overlap 942635, overlap 942634 942632 942628 AGGATAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC tnp_9 943243 - 942734 - | transposase for the IS1541 insertion element TERM 1065 943323 - 943305 - R 100 -16 -3.07307 | opp_overlap 943305 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAT TERM 1066 943305 - 943323 + r 100 -16 -4.37092 | opp_overlap 943305 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAT TERM 1067 943367 - 943338 - R 100 -18.1 -3.28712 | opp_overlap 943338 943345, overlap 943345 GTTTTCTGGGCACAA TAAAAAACGCCGC TGAT GCGGCGTTTTTTA TTGGCTAAATACGCA TERM 1068 943338 - 943367 + r 100 -18.1 -3.07816 | opp_overlap 943338 943345, overlap 943345 GTTTTCTGGGCACAA TAAAAAACGCCGC TGAT GCGGCGTTTTTTA TTGGCTAAATACGCA TERM 1069 943360 - 943345 - R 100 -11.8 -5.55769 | opp_overlap 943338 943345, overlap 943338 GGGCACAATAAAAAA CGCCGC TGAT GCGGCG TTTTTTATTGGCTAA TERM 1070 943345 - 943360 + r 100 -11.8 -5.4833 | opp_overlap 943345 943338, overlap 943338 GGGCACAATAAAAAA CGCCGC TGAT GCGGCG TTTTTTATTGGCTAA YP_0879 944397 - 943393 - | nucleoid-associated protein NdpA YP_0880 944575 - 944802 + | hypothetical protein TERM 1071 945726 - 945740 + G 71 -5.6 -4.4572 | TTACAGTTCGGGTAA CCGGCA AGA TACCGG TTTATTTGGCCTGTT YP_0881 944830 - 946626 + | hypothetical protein TERM 1072 946815 - 946848 + F 100 -13.3 -3.91144 | opp_overlap 946813 946823, overlap 946818 946823 GCCGACCAAATACCT CAACAAAACCAATCC ATTC GGGTTGGTTTTGTCG TTTGTGGAGTGTGGC TERM 1073 946818 - 946845 + F 100 -13.6 -3.02186 | opp_overlap 946813 946823, overlap 946815 946823 GACCAAATACCTCAA CAAAACCAATCC ATTC GGGTTGGTTTTG TCGTTTGTGGAGTGT TERM 1074 946823 - 946840 + F 86 -7.7 -4.64846 | opp_overlap 946813 946823, overlap 946818 946815 AATACCTCAACAAAA CCAATCC ATTC GGGTTGG TTTTGTCGTTTGTGG TERM 1075 946840 - 946823 - f 73 -5.5 -4.6759 | opp_overlap 946823 946818 946815, overlap 946813 AATACCTCAACAAAA CCAATCC ATTC GGGTTGG TTTTGTCGTTTGTGG TERM 1076 946911 - 946895 - f 72 -9.4 -3.17051 | overlap 946893 TTGGGATGAGCAAGA GTGCCG GGATG CGGCAC AGCATAATTTCAATG TERM 1077 947342 - 947379 + F 87 -8.6 -4.5464 | overlap 947343 TCACATGCGAGGTTT TTATGTTGGTTCAGTT AGTTCA ATCTGAACCAACATAC TTTTGCTTATATATA TERM 1078 947343 - 947378 + F 89 -12.1 -3.317 | overlap 947342 CACATGCGAGGTTTT TATGTTGGTTCAGTT AGTTCA ATCTGAACCAACATA CTTTTGCTTATATAT YP_0883 947597 - 948745 + | hypothetical protein YP_0884 948749 - 949246 + | hypothetical protein TERM 1079 950184 - 950199 + G 71 -6.2 -4.34402 | opp_overlap 950183 TTAAATTAAAAACTG GGATAA TAGG TTATCC TTTTGATATGAAAGA YP_0885 949859 - 950308 + | hypothetical protein TERM 1080 950388 - 950367 - T 100 -12.3 -4.8143 | opp_overlap 950366 950365 GTAACAAGGTAAAAA CCGCTCACC AAAG GGTGAACGG CCTTCTTGAATTCAA bglA 951897 - 950434 - | 6-phospho-beta-glucosidase TERM 1081 950511 - 950524 + g 74 -4.5 -4.84359 | AACGCGCCATTGTAC CGGTG CCAT CATCG TTTTTATCGACATAA rpiR2 952901 - 952161 - | LacI family regulatory protein TERM 1082 953082 - 953106 + r 75 -7.2 -4.33621 | gap 1, opp_overlap 953085, overlap 953083 953085 TTCTTTGTAGATAGC TA-ACCGGGCG TAAT TGCCCGGTATA TTTATTAATTCACTG TERM 1083 953083 - 953104 + r 72 -7.9 -3.7642 | opp_overlap 953085, overlap 953082 953085 TCTTTGTAGATAGCT AACCGGGCG TAAT TGCCCGGTA TATTTATTAATTCAC TERM 1084 953085 - 953102 + r 80 -10.5 -3.45532 | opp_overlap 953085, overlap 953083 953082 TTTGTAGATAGCTAA CCGGGCG TAAT TGCCCGG TATATTTATTAATTC TERM 1085 953102 - 953085 - R 74 -9.8 -3.15999 | opp_overlap 953085 953083 953082 TTTGTAGATAGCTAA CCGGGC GTAATT GCCCGG TATATTTATTAATTC stf 953978 - 953199 - | putative bacteriophage tail fiber protein TERM 1086 953906 - 953934 + g 70 -9.5 -3.25942 | opp_overlap 953888 953929, overlap 953905 953912 TGGGTGGAACGCCAC CGGCGACGTTGCC GTC GGTAAATTCGCCG TTACTGTCGGCGCGT YP_0889 954422 - 954075 - | putative bacteriophage protein YP_0890 954679 - 954419 - | putative bacteriophage protein xkdT 955812 - 954676 - | putative bacteriophage protein YP_0892 956271 - 955816 - | putative bacteriophage protein GP46 YP_0893 956864 - 956268 - | putative bacteriophage (baseplate assembly) protein TERM 1087 956799 - 956788 - G 71 -7.2 -4.07568 | overlap 956789 TTGCTGTCGTCAAAA GCGG TCAC CCGC CCGATCCCCAGCAGC YP_0894 957935 - 956880 - | putative bacteriophage tail protein YP_0895 959338 - 957932 - | putative bacteriophage protein TERM 1088 959393 - 959380 - R 100 -9.5 -5.4387 | ACAGAAAGTAAAAAA CCCGC TGGA GCGGG TTCGAGGTTATTGAC TERM 1089 959473 - 959499 + r 72 -10.1 -2.88849 | gap 1, opp_overlap 959462, overlap 959468 959474 ACATCCATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCTCTGCC TERM 1090 959474 - 959500 + r 84 -10.1 -3.82218 | gap 1, opp_overlap 959462, overlap 959468 959473 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCTCTGCCT YP_0896 961098 - 959605 - | putative bacteriophage coat protein YP_0897 961518 - 961219 - | hypothetical protein TERM 1091 961435 - 961453 + g 84 -13.2 -3.38316 | AGGTTCGCTGAGTTC GACCACCT CAT AGGTGGTC TTGCTTGCGTCGTGA YP_0898 961888 - 961520 - | hypothetical protein YP_0899 963418 - 961910 - | putative bacteriophage tail sheath protein TERM 1092 963087 - 963073 - G 71 -7.8 -4.06633 | TATAAAGTGAAATAA CACCGG TCT CCGATG CCGCCGTATTGATGG YP_0900 963609 - 963415 - | putative bacteriophage protein YP_0901 964261 - 963614 - | hypothetical protein YP_0902 964567 - 964277 - | putative bacteriophage protein TERM 1093 964672 - 964656 - R 91 -3.5 -5.85737 | opp_overlap 964656 964655 964663 ACAGCAATAAAAAAA CCCCGTC GAT GCTGGGG CTTCTTATTGTTTAC TERM 1094 964824 - 964811 - R 100 -8.1 -6.04953 | ATAGAAACAAAAAAA CCTGC CACA GCAGG AAGTTAATCGGTCTT TERM 1095 965152 - 965126 - R 100 -8.1 -5.30189 | gap 1, overlap 965130 TATAAGATGAAAAAA GACA-GCCACAC CGAA GTGTGGCCTATC ACAGTTAGCTATACA TERM 1096 965147 - 965130 - R 90 -11.3 -3.7035 | overlap 965126 AGATGAAAAAAGACA GCCACAC CGAA GTGTGGC CTATCACAGTTAGCT hfi1 965975 - 965181 - | hypothetical protein glpR3 966766 - 965951 - | putative transcriptional regulatory protein araD2 967475 - 966846 - | putative aldolase YP_0906 968785 - 967472 - | hypothetical protein TERM 1097 968899 - 968911 + r 74 -4.9 -4.8743 | opp_overlap 968893, overlap 968904 TCAATTTAACTTAAT GTTAT TAA ATAAC TTTATTTATTTTAGA YP_0907 969466 - 968987 - | phage antitermination protein Q lexA2 969740 - 970462 + | putative prophage repressor protein msgA 970668 - 970910 + | putative stress response protein TERM 1098 970987 - 970997 + F 84 -2.6 -5.66989 | opp_overlap 970987, overlap 970992 TCAATGAGAAATTAA TTTT TTT AAAA TTTTTTTAATCTTTA pla2 971082 - 972017 + | outer membrane protease tar1 972397 - 974211 + | putative methyl-accepting chemotaxis transmembrane protein YP_0912 975313 - 974285 - | hypothetical protein TERM 1099 975533 - 975546 + H 77 -3.9 -5.16841 | opp_overlap 975537, overlap 975534 975537 GCGTCTTCCTCTCAA TTGAT GTAT ATCAA TTTTTATTGATATAC TERM 1100 975537 - 975562 + H 76 -10.7 -2.71325 | opp_overlap 975537, overlap 975533 975534 CTTCCTCTCAATTGA TGTATATCAAT TTTT ATTGATATACA TGGCTTTCTACGTCG TERM 1101 975562 - 975537 - H 76 -10.7 -2.52464 | opp_overlap 975533 975537 975534 CTTCCTCTCAATTGA TGTATATCAAT TTTT ATTGATATACA TGGCTTTCTACGTCG TERM 1102 977079 - 977069 - g 79 -6.8 -4.7373 | overlap 977070 TGAGCGTATTAAAAA TGGC GGT GCCA TGGCAGATATCCCCG melB1 975678 - 977216 + | putative transport protein TERM 1103 977235 - 977269 + G 78 -13.6 -2.65388 | opp_overlap 977221 977241, overlap 977241 ATTTCTGGTCGTGAC CACAAACCGCACCGGT CCC GCCAGTGCGGTTTTTG CTTCTCCCTTCCCTG TERM 1104 977263 - 977241 - g 87 -12.7 -3.96148 | opp_overlap 977235 977241 GGTCGTGACCACAAA CCGCACCGG TCCCG CCAGTGCGG TTTTTGCTTCTCCCT TERM 1105 977241 - 977263 + G 100 -11.2 -4.93968 | opp_overlap 977241, overlap 977235 GGTCGTGACCACAAA CCGCACCGGT CCC GCCAGTGCGG TTTTTGCTTCTCCCT YP_0914 977230 - 977403 + | hypothetical protein TERM 1106 977999 - 977981 - g 73 -3.1 -5.00616 | gap 1 GCGGCCCGCAAAAAA GACC-GGT GTTT ACCTGGCC GACCAAAGATAATCG TERM 1107 978515 - 978503 - g 80 -4.7 -5.1101 | opp_overlap 978503 978503 GCATTATGCAAAAAA CCGGC GGT GGCGG TGGATTTATTACTTA ampH 977491 - 978657 + | beta-lactamase/D-alanine carboxypeptidase TERM 1108 978760 - 978748 - T 77 -10.5 -3.22858 | overlap 978740 978746 GTAATGAGAGCAATA GCCCG CAC CGGGC ACATGCTGGATAAGC TERM 1109 978812 - 978836 + T 85 -7.2 -4.90266 | opp_overlap 978812 AGAGAAAAGCAAAAA CCCGTTATCT TATTC AGATAACAGG TTTTTAATTGGTGCC TERM 1110 978836 - 978812 - T 100 -9.4 -5.15526 | opp_overlap 978812 AGAGAAAAGCAAAAA CCCGTTATCT TATTC AGATAACAGG TTTTTAATTGGTGCC TERM 1111 979369 - 979344 - T 100 -15.5 -3.80733 | opp_overlap 979348, overlap 979348 CGTAGCTCACAATAA GAAACGCGGCC GAAT GACCGCGTTTC TCTCAGGACTCACAC TERM 1112 979348 - 979365 + T 77 -8.3 -4.0371 | opp_overlap 979348 979344 GCTCACAATAAGAAA CGCGGCC GAAT GACCGCG TTTCTCTCAGGACTC TERM 1113 979365 - 979348 - T 100 -10.5 -4.51812 | opp_overlap 979348, overlap 979344 GCTCACAATAAGAAA CGCGGCC GAAT GACCGCG TTTCTCTCAGGACTC ompC1 980521 - 979397 - | outer membrane porin protein C TERM 1114 980895 - 980909 + H 100 -11.4 -5.626 | TCGTTAATGTTACGA CCGGTC TCT GACCGG TTTTTTTCTCCGGTC proP10 981615 - 982769 + | hypothetical protein TERM 1115 983566 - 983554 - f 75 -10.5 -2.75183 | overlap 983551 AGTGCCACTCAATGA GGGGG CTA CCCCC GAAGATATTGCGGCA TERM 1116 983963 - 983949 - f 81 -4.2 -5.31456 | overlap 983950 TGAATCTACAAAAAA TTGCCA CTA TGGCAG AGCAGCACCACGGTG TERM 1117 983962 - 983950 - f 72 -7.7 -3.77789 | overlap 983949 GAATCTACAAAAAAT TGCCA CTA TGGCA GAGCAGCACCACGGT TERM 1118 985206 - 985194 - f 76 -7.7 -4.14193 | AGAAGATGATATAAA CCTCT ATG AGAGG CAACTAAAAACCAGT TERM 1119 985433 - 985445 + F 73 -2.7 -5.14563 | opp_overlap 985430 AGATCGAAAATAGCA TCAGT CAG ATTGA TTTTTTCATCACCAG rcsB 985488 - 986141 + | transcriptional regulator RcsB TERM 1120 986165 - 986191 + T 100 -15.2 -3.83844 | CCGCTCGACTCTCAA GCCCAGTTTTGC TCT GCAATACTGGGC TTATTAATTAATGAA rcsC 989082 - 986209 - | hybrid sensory kinase in two-component regulatory system with RcsB and YojN TERM 1121 988367 - 988355 - G 76 -3.3 -5.09762 | overlap 988357 CGGGAAGAAATAAAA TCCTC TAA GCGGA CACTCTGCTCAAAGC TERM 1122 988782 - 988807 + g 81 -6.1 -4.96848 | opp_overlap 988779 988776, overlap 988784 TATTCATAACCATGC CACTAGTGGCA TCAG TGTCACTGGCG TTTTTATCTAGCCGA TERM 1123 988911 - 988923 + g 100 -3.3 -5.95166 | TGTTGTTATATTCCT GACGA ATA TCGGC TTTTTTTTCGTTAAG TERM 1124 989134 - 989183 + r 81 -5.2 -5.14563 | opp_overlap 989136, overlap 989136 CGATAACCGATAAAA AAGCCAGCTCAGT-TGCTTAAC TGATGGGC GTTAAGCTCACTG-GCTGGCTG TTTTTTAATGACACG TERM 1125 989181 - 989136 - R 100 -7.8 -5.3236 | opp_overlap 989134 989136 ATAACCGATAAAAAA GCCAGCTCAGT-TGCTTAAC TGATGGGC GTTAAGCTCACTG-GCTGGC TGTTTTTTAATGACA TERM 1126 989136 - 989181 + r 76 -7.8 -4.20707 | opp_overlap 989136, overlap 989134 ATAACCGATAAAAAA GCCAGCTCAGT-TGCTTAAC TGATGGGC GTTAAGCTCACTG-GCTGGC TGTTTTTTAATGACA TERM 1127 989256 - 989233 - R 77 -11 -2.81547 | overlap 989230 GCCGCAGATGAATGA GCAGGTGCAA TAAA CCGCACCTGC CAGAGCAACATTATT gyrA 991945 - 989270 - | DNA gyrase subunit A TERM 1128 991268 - 991288 + g 77 -11.9 -3.03771 | opp_overlap 991266 991263 CTCTTCAATACCACG GCGGCCATT AAT AATGGCTGC TGTTGGGAAGTCTGG TERM 1129 991319 - 991340 + g 73 -5.9 -4.48263 | overlap 991337 GCCAGGGATATACTC CATCAGC CCTTCAAT GCTGATG TTTTCATCTTCTATA ubiG 992207 - 992935 + | 3-demethylubiquinone-9 3-methyltransferase TERM 1130 992957 - 992978 + F 81 -10.9 -3.27786 | gap 1, opp_overlap 992949 992953 992950, overlap 992949 CGTAGAACCCACTGG GAGCAGG-GC TAA GCACCTGCTC TTCCTGGCTTTTCCC TERM 1131 994320 - 994337 + G 70 -8.4 -3.7941 | TCACAGGGCGGTGTT CGTGGC GGCGCG GCCACG TTGTTCTACCCAATG TERM 1132 995125 - 995144 + G 71 -10.8 -3.03007 | overlap 995105 AACAAGGCGCTTGCC CGTGGTTT AACG AAACCACG TATTCACAAGGTATT nrdA 993429 - 995717 + | ribonucleotide-diphosphate reductase subunit alpha nrdB 995880 - 997010 + | ribonucleotide-diphosphate reductase subunit beta fdx1 997014 - 997271 + | 2Fe-2S ferredoxin YfaE eco 997306 - 997815 + | ecotin precursor TERM 1133 997847 - 997826 - T 95 -13 -3.20207 | opp_overlap 997821 AATAGCACTCATTAA CCAGGCGC TATTCC GCGCCTGG GCTAAATATTAACAT cinA2 999066 - 997873 - | competence damage-inducible protein A YP_0928 999160 - 999411 + | hypothetical protein tyrP 999685 - 1000893 + | tyrosine-specific transport protein TERM 1134 1000938 - 1000911 - T 100 -15 -4.0342 | gap 1, opp_overlap 1000911 CGTAAGCAATAATAA GGGCGCATATCCT GAT AGGA-ATGCGCCC TTTTCCGTCAGCCCA TERM 1135 1000911 - 1000938 + T 100 -15 -4.18018 | gap 1, opp_overlap 1000911 CGTAAGCAATAATAA GGGCGCATATCCT GAT AGGA-ATGCGCCC TTTTCCGTCAGCCCA YP_0930 1001692 - 1001150 - | hypothetical protein TERM 1136 1002327 - 1002312 - g 91 -5.4 -5.42862 | opp_overlap 1002312 AGATCGGTAAAAAAA CAGACA TGTT TGTCCG CTTCTCCACTGTGGC TERM 1137 1003367 - 1003387 + G 70 -9.7 -3.31501 | overlap 1003368 GAGCATCAACGCATG TTCACCCGT ATT GCGGGTGAG TTATCGCAAGTTCCT TERM 1138 1003368 - 1003386 + G 70 -11 -2.58579 | overlap 1003367 AGCATCAACGCATGT TCACCCGT ATT GCGGGTGA GTTATCGCAAGTTCC katA 1002050 - 1003492 + | catalase TERM 1139 1003514 - 1003556 + T 84 -6.5 -4.93318 | gap 1, overlap 1003516 TCAGCCCCTTTGAAC TGCACC-CCAAATGTTGG ATAACCCC CTGACATTTGGAGGTGTA TTTTTATGGCTTATC TERM 1140 1003516 - 1003554 + T 71 -6.9 -4.07789 | gap 1, overlap 1003514 AGCCCCTTTGAACTG CACC-CCAAATGTTGG ATAACCCC CTGACATTTGGAGGTG TATTTTTATGGCTTA dinG 1005740 - 1003560 - | ATP-dependent DNA helicase DinG TERM 1141 1004497 - 1004507 + g 73 -5.4 -4.65895 | CATTTAGAAATCGGC GCAT TCG ATGC TTTTTCCATCGCCGC TERM 1142 1004849 - 1004859 + g 70 -2.4 -5.02476 | GTTCAGGATGGGCAA GCCC AGG GGGG TTTTTTGGCCGGTAT TERM 1143 1006876 - 1006863 - g 73 -5.3 -4.63218 | opp_overlap 1006863 1006872, overlap 1006872 GTTTTGCTAATAAAA CTCAA AACA TTGAG TTAGTGGCTCAATAT ompC_1 1006010 - 1007125 + | outer membrane protein C2 TERM 1144 1007189 - 1007206 + F 100 -12.7 -5.0133 | GAATGTATTTATTAT GCCGGGA TTAT TCCCGGC TTTTTTACGCCACTC rhaT4 1007537 - 1008427 + | hypothetical protein YP_0935 1008537 - 1008755 + | hypothetical protein adiA 1011179 - 1008873 - | putative amino acid decarboxylase TERM 1145 1009009 - 1008986 - G 71 -11.1 -2.81207 | overlap 1008985 TACTTAAGATATAAC GTAGCCATG GTTCTT CATGGCTAC CAAAACTCTCCCCCG potE1 1012583 - 1011249 - | arginine:agmatin antiporter TERM 1146 1011552 - 1011536 - G 71 -10.9 -3.13376 | overlap 1011534 1011533 1011529 1011544 AAACGGAAGAAACCA GGCCAAA CTC TTTGGCC GCATTCGGCGAAATA proW1 1013903 - 1013067 - | putative ABC transport integral membrane subunit proV1 1014838 - 1013900 - | putative ABC transport ATP-binding subunit proW2 1015971 - 1014835 - | putative ABC transport integral membrane subunit TERM 1147 1016225 - 1016235 + H 71 -4 -4.7497 | overlap 1016208 GGCTGGCTCCCCCAG CTAA TGG TTAG TTTTTAATAAATCCG TERM 1148 1016967 - 1016978 + H 70 -5.8 -4.31737 | TACGACTTTGGTTGC TCCC AGTT GGGA TTTATTGGTGGTTTT sseA 1017900 - 1018754 + | putative sulfurtransferase TERM 1149 1018780 - 1018762 - T 72 -8.1 -3.83026 | TGGCGTGATACCAAA GGCTGGC TCACC ACCAGCC ACTGACATGACTCAT dcd1 1020324 - 1018909 - | putative pyridoxal-dependent decarboxylase YP_0944 1021205 - 1020348 - | hypothetical protein livF1 1022081 - 1021320 - | putative ABC transport ATP-binding subunit TERM 1150 1021457 - 1021443 - G 100 -10 -4.67635 | GGCAAAATCATAAAA CTGCTC CAC GAGCAG GATAGCCATATCCCC livG1 1022948 - 1022112 - | putative ABC transport ATP-binding subunit livM1 1024021 - 1022945 - | branched chain amino acid ABC transporter permease TERM 1151 1023049 - 1023032 - G 83 -3.3 -5.46657 | overlap 1023033 CAGGCCAAGAAAAAA TTGCCAG TATT CCGGCAT CGCCATGGTGAACCA livM2 1025637 - 1024021 - | branched chain amino acid ABC transporter permease TERM 1152 1025686 - 1025655 - R 100 -10.9 -4.57837 | overlap 1025657 ATATGTGGTGAAAAA GAGCTGACGTCAG ATCCCG CTGACATCAGCAC GTCACAGCGATTACC TERM 1153 1025684 - 1025657 - R 100 -12.1 -3.90316 | overlap 1025655 ATGTGGTGAAAAAGA GCTGACGTCAG ATCCCG CTGACATCAGC ACGTCACAGCGATTA livK1 1027044 - 1025746 - | putative substrate-binding periplasmic transport protein TERM 1154 1027318 - 1027294 - R 72 -6.4 -4.31085 | TATATTAATCTAAAA CAGGCATGGC GGATT ACCACACCTG TTTTTTTACTAACAG YP_0950 1027922 - 1027449 - | hypothetical protein TERM 1155 1027634 - 1027646 + g 73 -3.3 -5.00884 | overlap 1027635 TGTCTTTCAATTCGA ATGCG ACA CGCAG TTTTTTCAACACAAT TERM 1156 1028000 - 1027985 - R 74 -4 -4.94243 | gap 1, overlap 1027980 1027988 GCAAAAAAACTAAAA GAGCGTC TTT GACG-TC TAGCGGGCAGTATTG YP_0951 1029055 - 1028168 - | putative ABC transport membrane permease TERM 1157 1028974 - 1028996 + g 74 -4 -5.00196 | ATCTGATATAACGTT TCTGCTGCCT GAA AAGCTGCGGA TTTTGTTGTTTCAGC YP_0952 1029912 - 1029052 - | putative ABC transport membrane permease TERM 1158 1029992 - 1029966 - R 75 -5.9 -4.70659 | gap 1, opp_overlap 1029969, overlap 1029969 1029971 TGTTACACCTAAAAA CAATAGCTCCGG CGAA CCAGAGCCA-TG TTGTTTTATCCGTTG TERM 1159 1029990 - 1029969 - R 93 -8.7 -4.46215 | opp_overlap 1029969, overlap 1029966 1029971 TACACCTAAAAACAA TAGCTCCGG CGAA CCAGAGCCA TGTTGTTTTATCCGT TERM 1160 1029988 - 1029971 - R 78 -9.1 -3.82353 | opp_overlap 1029969, overlap 1029969 1029966 CACCTAAAAACAATA GCTCCGG CGAA CCAGAGC CATGTTGTTTTATCC phnD 1030944 - 1030015 - | putative substrate-binding periplasmic transport protein phnC 1031853 - 1030981 - | ATP-binding component of phosphonate transport TERM 1161 1031184 - 1031194 + g 73 -5.4 -4.62069 | opp_overlap 1031184, overlap 1031173 1031168 1031186 GTAACGTATTCATAA TACG TGT CGTA TTTTTAGGGTCCAAC TERM 1162 1031889 - 1031928 + r 80 -8.7 -3.96298 | opp_overlap 1031900, overlap 1031894 1031900 TATTGATGATAGTTG CATGTGAAAAAGGTGAC AAAATA GCCACCTTTTTCGTGTG TTTAATTAATGACTG TERM 1163 1031917 - 1031900 - R 71 -4.8 -4.62069 | opp_overlap 1031900 1031894 1031889 GTTGCATGTGAAAAA GGTGAC AAAATA GCCACC TTTTTCGTGTGTTTA YP_0955 1032348 - 1032025 - | hypothetical protein YP_0956 1033561 - 1032458 - | hypothetical protein TERM 1164 1033493 - 1033480 - G 74 -2.3 -5.0707 | opp_overlap 1033481 1033487, overlap 1033481 AAATATAAAAATAAA CGACC CTCA GGTCT TGTTGCACGACTGCA YP_0957 1033873 - 1033703 - | hypothetical protein TERM 1165 1033778 - 1033764 - GH 80 -2.7 -5.34365 | opp_overlap 1033766 1033766 CGATAAGAAGAAAAA CGCGC TAATG GCGTG TTGGCGTTTGAGTAT YP_0958 1033862 - 1034215 + | hypothetical protein cyaB 1034780 - 1034241 - | adenylate cyclase 2 TERM 1166 1034318 - 1034328 + g 71 -6.8 -4.13995 | opp_overlap 1034317 TATTGGCAAAATCAC GGCA TTC TGCC TTTAATTTATCAAGC TERM 1167 1035901 - 1035929 + G 70 -3.2 -4.87626 | gap 1 CTTTAAACATTTACC TATCGCGGGTGAA TATC TGCACC-GTGATA TTTTTGATATTGCGG dld 1034987 - 1036702 + | D-lactate dehydrogenase TERM 1168 1036799 - 1036770 - T 100 -13 -3.7791 | opp_overlap 1036770 CAATTAGTCACTAAA GCGGAATTTGCC TCTGCT AGCAAATTCCGC TTCTCAGTCGCGATG TERM 1169 1036770 - 1036799 + T 95 -12.3 -3.35996 | opp_overlap 1036770 CAATTAGTCACTAAA GCGGAATTTGC CTCTGCTA GCAAATTCCGC TTCTCAGTCGCGATG pbpG 1037758 - 1036823 - | D-alanyl-D-alanine endopeptidase YP_0962 1038097 - 1038276 + | hypothetical protein YP_0963 1039294 - 1038350 - | tRNA-dihydrouridine synthase C TERM 1170 1039572 - 1039524 - R 88 -9.8 -4.07687 | gap 1, opp_overlap 1039530, overlap 1039526 AGTCGTGTGGTAAAA TA-CCCATGGGCAATGCCCATTT ATGA AAATGGACATTGCCAAAGAGATA GTCTAAATACGTATT TERM 1171 1039569 - 1039526 - R 100 -14 -3.63744 | opp_overlap 1039530, overlap 1039524 TCGTGTGGTAAAATA CCCATGGGCAATGCCCATTT ATGA AAATGGACATTGCCAAAGAG ATAGTCTAAATACGT TERM 1172 1039530 - 1039542 + r 78 -9.1 -3.87815 | opp_overlap 1039526 1039524 GTGGTAAAATACCCA TGGGC AAT GCCCA TTTATGAAAATGGAC YP_0964 1040517 - 1039588 - | hypothetical protein TERM 1173 1039837 - 1039815 - G 70 -8.6 -3.72374 | opp_overlap 1039815 1039816 1039831, overlap 1039813 1039816 1039830 1039831 GTTCATTAACAAATA CTTTACCATT AGT AATGGTAAAA TTTACCTCTCCTGAA TERM 1174 1040242 - 1040268 + g 80 -9.5 -4.11404 | opp_overlap 1040246, overlap 1040244 CGAATTCACCGCGTT AACATCACCAC TTACT GTGGTGATGTC TTTATCTACTATAGA TERM 1175 1040244 - 1040266 + g 82 -12.1 -3.65001 | opp_overlap 1040246, overlap 1040242 AATTCACCGCGTTAA CATCACCAC TTACT GTGGTGATG TCTTTATCTACTATA TERM 1176 1040849 - 1040825 - R 100 -9.9 -4.55697 | opp_overlap 1040828, overlap 1040827 1040828 ATTTTGATAAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCATATGCGCCTAT TERM 1177 1040847 - 1040827 - R 100 -12.5 -3.88703 | opp_overlap 1040828, overlap 1040825 1040828 TTTGATAAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 1178 1040846 - 1040828 - R 100 -16 -2.92499 | opp_overlap 1040828, overlap 1040827 1040825 TTGATAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 1179 1040828 - 1040846 + r 100 -16 -4.8048 | opp_overlap 1040828 1040827 1040825 TTGATAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC tnp_10 1041436 - 1040927 - | transposase for the IS1541 insertion element TERM 1180 1041516 - 1041498 - R 100 -16 -3.07307 | opp_overlap 1041498 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 1181 1041498 - 1041516 + r 100 -16 -4.36914 | opp_overlap 1041498 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 1182 1041553 - 1041536 - R 100 -9.1 -5.60993 | opp_overlap 1041536 CTGGGCACAAAAAAA CCGCCTC CTAA GAAGCGG TTTTATCAGTGAATA TERM 1183 1041536 - 1041553 + r 76 -6.9 -4.431 | opp_overlap 1041536 CTGGGCACAAAAAAA CCGCCTC CTAA GAAGCGG TTTTATCAGTGAATA TERM 1184 1043223 - 1043202 - R 84 -10.1 -3.74693 | TGCCACCGTATTAAA GGTGATCGC TCAG GCGGTCACC GAACTCGATAATAAA YP_0968 1044405 - 1043197 - | transposase for the IS285 insertion element TERM 1185 1044526 - 1044498 - R 100 -9.6 -4.86731 | opp_overlap 1044523 CCCTTCCAAAGAAAA CACCCTGTCAGC TTACC GCTCACAAGGTG GGAGTGACCATCTCA YP_0969 1044990 - 1044616 - | hypothetical protein dnaJ1 1045565 - 1045011 - | molecular chaperone YP_0971 1045914 - 1045714 - | hypothetical protein YP_0972 1046676 - 1046443 - | transposase TERM 1186 1047048 - 1047020 - R 100 -13.2 -4.86731 | opp_overlap 1047032 CCCTCCCAAAGAAAA CACCCTGTCAGC TTACC GCTCACAGGGTG GGGGTGATCATCTTA TERM 1187 1047068 - 1047085 + r 76 -6.9 -4.431 | opp_overlap 1047068 TGATCATCTTATTAA CCGCCTC CTAA GAAGCGG TTTTATCAGTGAATA srmB1 1048540 - 1047128 - | ATP-dependent RNA helicase RhlE acrR3 1048874 - 1049584 + | putative DNA-binding transcriptional regulator TERM 1188 1050517 - 1050504 - g 70 -4.5 -4.63184 | AATTCACGCCAAAAA CAGTG GAAA CACCG GATTTACGCACCGAC acrA4 1049636 - 1050622 + | hypothetical protein TERM 1189 1051964 - 1051982 + GF 70 -7.4 -3.75153 | opp_overlap 1051963 1051964 CCAGCGCGACAAAAT TGCCGATA TGA TTTCGGCA TTTAACTTCACCCCG ccmA2 1050636 - 1052378 + | ABC-type multidrug transport system, ATPase component TERM 1190 1053305 - 1053324 + GF 73 -5 -4.66609 | gap 1, opp_overlap 1053297, overlap 1053298 1053306 1053308 AATTTAACGCCGCGA TGATCGCGT TGA ACGCGG-CA TTTTTGCCTGCGGTA YP_0977 1052290 - 1053558 + | ABC-type multidrug transport system, permease component YP_0978 1053571 - 1054677 + | ABC-type multidrug transport system, permease component YP_0979 1055045 - 1054716 - | hypothetical protein YP_0980 1055280 - 1055053 - | coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase-like protein TERM 1191 1055361 - 1055371 + H 90 -4 -5.64274 | opp_overlap 1055361, overlap 1055349 TGTTATTGAGGAAAT CAAT ATG ATTG TTTTTTTATCCATGA lysR4 1055835 - 1056746 + | transcriptional regulator nemA1 1057856 - 1056747 - | NADH:flavin oxidoreductase atoC1 1059496 - 1058204 - | response regulator baeS2 1061378 - 1059555 - | Signal transduction histidine kinase TERM 1192 1060757 - 1060737 - G 78 -4 -5.12474 | opp_overlap 1060737 1060749 GAGAATAGACAAAAA GATAATCG TATTG CGAATATC TTTTGCTTGCATCGC TERM 1193 1061418 - 1061465 + H 100 -17.4 -4.76041 | opp_overlap 1061428 TCAATGAATTGGTGG CGGGTAATTATTACCCAC ATCGCCGCTACC GTGGGTAATAATTACCCG TTTTTACTGAATGTC zraP 1061727 - 1062200 + | zinc resistance protein TERM 1194 1062241 - 1062209 - T 73 -5.6 -4.51238 | opp_overlap 1062211, overlap 1062210 1062211 CCGATAAAATAGAAA CTCCCCTGATTAAC ATTTG ATTAATCAGGGGTT ATCTGGAGAGTCTAT TERM 1195 1062240 - 1062210 - T 71 -9.1 -3.29658 | opp_overlap 1062211, overlap 1062209 1062211 CGATAAAATAGAAAC TCCCCTGATTAAC ATTTG ATTAATCAGGGGT TATCTGGAGAGTCTA TERM 1196 1062239 - 1062211 - T 86 -12.6 -2.5671 | opp_overlap 1062211, overlap 1062210 1062209 GATAAAATAGAAACT CCCCTGATTAAC ATTTG ATTAATCAGGGG TTATCTGGAGAGTCT TERM 1197 1062211 - 1062239 + T 91 -11.9 -3.49102 | opp_overlap 1062211 1062210 1062209 GATAAAATAGAAACT CCCCTGATTAA CATTTGA TTAATCAGGGG TTATCTGGAGAGTCT TERM 1198 1062928 - 1062904 - T 100 -9.9 -4.4572 | opp_overlap 1062907, overlap 1062906 1062907 AACATGGCAAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCATATGCGCCTAT TERM 1199 1062926 - 1062906 - T 100 -12.5 -3.82628 | opp_overlap 1062907, overlap 1062904 1062907 CATGGCAAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 1200 1062925 - 1062907 - T 100 -16 -2.88854 | opp_overlap 1062907, overlap 1062906 1062904 ATGGCAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 1201 1062907 - 1062925 + T 100 -16 -4.8048 | opp_overlap 1062907 1062906 1062904 ATGGCAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC tnp_11 1063464 - 1063006 - | transposase for the IS1541 insertion element TERM 1202 1063595 - 1063577 - R 100 -16 -3.07307 | opp_overlap 1063577 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAC TERM 1203 1063577 - 1063595 + r 100 -16 -4.36914 | opp_overlap 1063577 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAC TERM 1204 1063616 - 1063631 + r 77 -4.8 -4.9138 | opp_overlap 1063616 TGGGCACAACAAGAA GAAAAT AGCC ATTTTC TTTTGTTTAAATAAT xapA 1065256 - 1064393 - | purine nucleoside phosphorylase rhaT5 1065569 - 1066450 + | hypothetical protein lysR5 1067381 - 1066488 - | DNA-binding transcriptional activator XapR betT1 1069814 - 1067613 - | choline transport protein BetT TERM 1205 1069593 - 1069575 - G 77 -9.5 -3.7319 | AGTCATAAGACAGAA CGCGAGG ATCAA CCCCGCG GACGTAAAGAACACC TERM 1206 1069980 - 1069965 - H 75 -10.4 -2.73542 | CGTAACGGGTAACTA GCTGCC AATA GGCAGC ATGAATAACAGTATT TERM 1207 1070203 - 1070187 - g 74 -4.4 -4.82901 | opp_overlap 1070201, overlap 1070201 TTTCCGTGACAAAAA TGGCCT GCTAG AAGCCA CAATGAGGTATCTGA betI 1070002 - 1070622 + | transcriptional regulator BetI TERM 1208 1070835 - 1070823 - g 73 -10.5 -3.3197 | ACAGGATGTTGATAA GGCGG TAG CCGCC GCCAAACAAGGTCAG betB 1070680 - 1072152 + | betaine aldehyde dehydrogenase betA 1072175 - 1073878 + | choline dehydrogenase TERM 1209 1074033 - 1074001 - T 100 -11.3 -5.63517 | opp_overlap 1074008, overlap 1074007 1074008 TGGTGAAAGAAAAAA TAAATATCCTCCGGC ATA GCCGGAGGTTTTTCA TATGCGCCTATAAGG TERM 1210 1074027 - 1074007 - T 100 -12.5 -4.1934 | opp_overlap 1074008, overlap 1074001 1074008 AAGAAAAAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 1211 1074026 - 1074008 - T 100 -16 -3.07944 | opp_overlap 1074008, overlap 1074007 1074001 AGAAAAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 1212 1074008 - 1074026 + T 100 -16 -4.8048 | opp_overlap 1074008 1074007 1074001 AGAAAAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC tnp_12 1074616 - 1074107 - | transposase for the IS1541 insertion element TERM 1213 1074696 - 1074678 - R 100 -16 -3.07307 | opp_overlap 1074678 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAC TERM 1214 1074678 - 1074696 + r 100 -16 -4.36914 | opp_overlap 1074678 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAC TERM 1215 1074737 - 1074717 - R 100 -11.2 -5.18726 | opp_overlap 1074717 TGGGCACAACAAAAA GGACACCA GATTT TGGTGTCC TTTACTATCTCAAAC TERM 1216 1074717 - 1074737 + r 100 -11.9 -3.88498 | opp_overlap 1074717 TGGGCACAACAAAAA GGACACCAG ATT TTGGTGTCC TTTACTATCTCAAAC YP_0996 1075510 - 1074800 - | hypothetical protein TERM 1217 1075310 - 1075297 - G 85 -3.8 -5.38549 | overlap 1075300 CGGAAATAACAAAAA CCAG ACCAAG CTGG GCAATAATCAAGCCA MoaE 1076111 - 1075653 - | molybdopterin synthase large subunit moaD 1076353 - 1076108 - | molybdopterin synthase small subunit moaC 1076832 - 1076350 - | molybdenum cofactor biosynthesis protein C moaA 1078077 - 1077052 - | molybdenum cofactor biosynthesis protein A YP_1001 1078564 - 1079487 + | hypothetical protein YP_1002 1079863 - 1079618 - | hypothetical protein uvrB 1082170 - 1080155 - | excinuclease ABC subunit B TERM 1218 1082062 - 1082081 + gH 76 -7.8 -4.08216 | overlap 1082045 1082043 1082063 CTGTTACGCCTAGCA GGGTCTGG TGTG CCAGACCA TTTTCCAGCCCCTCC TERM 1219 1082063 - 1082080 + gH 83 -11.3 -3.04715 | overlap 1082045 1082043 1082062 TGTTACGCCTAGCAG GGTCTGG TGTG CCAGACC ATTTTCCAGCCCCTC YP_1004 1082154 - 1082351 + | hypothetical protein TERM 1220 1083490 - 1083467 - g 74 -8.2 -4.09739 | TGAACCCCCGCAAAA CTTGCAACAG CAGC CTGTTGAAAG ACGCAATGCGTTAGG TERM 1221 1083598 - 1083618 + G 90 -9 -4.6856 | gap 1, opp_overlap 1083597 1083598 CAGGCCGCCACAAAT CCCA-CCCG ATTC CGGGCTGGG TTTTTGAGCTATTTC livF2 1083261 - 1083971 + | putative amino acid transporter bioD 1084860 - 1084123 - | dithiobiotin synthetase TERM 1222 1084632 - 1084619 - G 79 -5.3 -5.00616 | opp_overlap 1084619 GTCGCTTCCAAAAAA GTGAA CGGA TTCAC TTGTGAGTAACCGAG bioC 1085641 - 1084838 - | biotin synthesis protein BioC TERM 1223 1085114 - 1085103 - G 76 -3 -5.09426 | opp_overlap 1085081 TGCAATGGCAAAAAA TCAT TTAC ATGA CGCTGACCATCCACC bioF 1086776 - 1085625 - | 8-amino-7-oxononanoate synthase bioB 1087813 - 1086776 - | biotin synthase TERM 1224 1089046 - 1089056 + G 74 -6.8 -4.36914 | GTTAATGTCGCCCGC CTGC AAC GCAG TTTTGTCGAACAGGG bioA 1087912 - 1089192 + | adenosylmethionine--8-amino-7-oxononanoate transaminase YP_1011 1090381 - 1089377 - | 6-phosphogluconolactonase cof2 1090672 - 1091493 + | phosphotransferase modC 1092628 - 1091549 - | molybdate transporter ATP-binding protein TERM 1225 1092624 - 1092642 + g 93 -8.8 -5.01732 | overlap 1092625 CTGAAATTCAGTTCT AGCATGGG GCC CCCATGCG TTTTTTACCCCAATT TERM 1226 1092625 - 1092641 + g 82 -12.3 -3.60316 | overlap 1092624 TGAAATTCAGTTCTA GCATGGG GCC CCCATGC GTTTTTTACCCCAAT modB 1093317 - 1092622 - | molybdate ABC transporter permease protein TERM 1227 1093161 - 1093134 - G 73 -10.6 -3.19657 | overlap 1093129 1093127 1093137 ACAAGAGATAGCCAA TCACCACCGGTG GCAG CACCAGTGGCAA ATGAATCACACTGTC TERM 1228 1093158 - 1093137 - G 74 -12.3 -2.78422 | overlap 1093134 1093129 1093127 AGAGATAGCCAATCA CCACCGGTG GCAG CACCAGTGG CAAATGAATCACACT modA 1094108 - 1093317 - | molybdate transporter periplasmic protein TERM 1229 1093886 - 1093857 - G 71 -5 -4.44046 | gap 1 GTCAGCGGAAATAAA CAGATCG-GCCGG TGCCC CCTGCTCAATCTG CCGTGCCAGCGTGGA TERM 1230 1094280 - 1094257 - R 89 -7.4 -5.04175 | GGAATGATACAAAAA TGCCCAACGT TTAT ACGCCAGGCA TTCAGAAATCAGAGA YP_1016 1094483 - 1094331 - | hypothetical protein TERM 1231 1094578 - 1094539 - H 78 -9.6 -3.59279 | gap 1, opp_overlap 1094541 1094554, overlap 1094536 TATCACAATAACCAA CACTGCTGCCTATCATTTA CTG TAAATGATAT-CAGCAATG AATTAACCCTGTTAT modE 1094766 - 1095557 + | DNA-binding transcriptional regulator ModE TERM 1232 1096006 - 1096032 + G 70 -8.7 -3.59979 | overlap 1096008 GCGGCCCGTGACCCG CAGCGCTGTCA ACAAC TGGCAGCGCTA TTTGGAATCAGCCAC TERM 1233 1096008 - 1096030 + G 77 -11.3 -3.38046 | overlap 1096006 GGCCCGTGACCCGCA GCGCTGTCA ACAAC TGGCAGCGC TATTTGGAATCAGCC TERM 1234 1096736 - 1096751 + G 78 -4 -5.16572 | gap 1, overlap 1096707 1096730 GCACCCGTGTACGTA CCGTGAT TTT ATC-CGG TTTTTTCGATTCGAT modF 1095667 - 1097157 + | putative molybdenum transport ATP-binding protein ModF TERM 1235 1097317 - 1097307 - f 78 -2.4 -5.44119 | TTTAGCTCAAAAAAA TGCC TTA GGCT AAACCGTCATTTAGG TERM 1236 1097783 - 1097767 - g 78 -3.6 -5.09426 | TTCAAGGTGAAAAAA CACCCA TCAGT CGGGCG CATGGGTTGGGTTGT YP_1019 1097374 - 1098192 + | hypothetical protein TERM 1237 1098742 - 1098753 + G 70 -4.4 -4.60487 | TCCGTGATCGCACAC TGCT CGAT AGCA TTTTTGCGGCTCATC TERM 1238 1099405 - 1099386 - g 73 -9.2 -3.76224 | opp_overlap 1099391 GCCGCATTCAGTAAA GCCTGTGG TAAA CCACTGGC CTACCATTTTGCCCC galE 1098552 - 1099568 + | UDP-galactose-4-epimerase galT 1099578 - 1100630 + | galactose-1-phosphate uridylyltransferase galK 1100627 - 1101778 + | galactokinase psiF 1103134 - 1103469 + | putative starvation-inducible protein gpmA 1103732 - 1104568 + | phosphoglyceromutase TERM 1239 1104619 - 1104596 - T 100 -7.5 -5.62219 | gap 1, opp_overlap 1104596 AACACAGTAAAAAAA CCCCGTACAT GAATA ATGT-CGGGG TTTTTTATTGACGGC TERM 1240 1104596 - 1104619 + T 95 -7.5 -5.4505 | gap 1, opp_overlap 1104596 AACACAGTAAAAAAA CCCCGTACAT GAATA ATGT-CGGGG TTTTTTATTGACGGC aroG 1105802 - 1104750 - | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 1241 1105194 - 1105180 - G 71 -5.7 -4.33417 | opp_overlap 1105185 GTCACCGACAAGAAA CAGTG TGGGG CACTG GCCGCGTTGATCGCA TERM 1242 1105226 - 1105242 + g 86 -8.7 -4.56597 | CAATAGCCACTTTAA TGGTGCC GTC GGTACCA TTTTTAAAACCAACG TERM 1243 1105392 - 1105374 - G 73 -5.2 -4.72333 | opp_overlap 1105375 1105379, overlap 1105375 AATCATATCCAAAAA CTCACCGG CGG CCGGTAAC CCGCTGTCGTTAATT TERM 1244 1105379 - 1105401 + g 70 -9 -3.51411 | opp_overlap 1105375 1105374, overlap 1105375 TATCCAAAAACTCAC CGGCGGCCGG TAA CCCGCTGTCG TTAATTTCGACGAGT czcD 1106251 - 1107189 + | zinc transporter ZitB pnuC 1108029 - 1107304 - | intergral membrane NMN transport protein PnuC nadA 1109212 - 1108151 - | quinolinate synthetase TERM 1245 1108433 - 1108417 - G 76 -4.4 -5.02074 | gap 1 GCATCTTGTAAAAAA TGCC-CC GATC GGTGGCA ACAATTAACGTTTTC TERM 1246 1109324 - 1109314 - R 70 -5.4 -4.54026 | opp_overlap 1109320, overlap 1109318 1109320 TCCTAAACAAAATAA CCAA TAT TTGG CAAAAAGTCGCCAAA TERM 1247 1109559 - 1109574 + r 73 -9 -3.5399 | overlap 1109554 ACTCGCCCTTCGGGT CAACGC TGGC GCGTTG TTGTCTCGCTCTGCT TERM 1248 1110038 - 1110004 - R 100 -14.4 -4.0162 | TCTTCACACGATAAA GCCCAGAAATCAGTCA AAT TGACTAAATCCTGGGC TCAAAAAAGCTAAAG YP_1030 1110857 - 1110048 - | hypothetical protein pal 1111373 - 1110867 - | peptidoglycan-associated outer membrane lipoprotein tolB 1112716 - 1111424 - | translocation protein TolB tolA 1114026 - 1112836 - | cell envelope integrity inner membrane protein TolA TERM 1249 1113154 - 1113178 + g 73 -5.1 -4.70879 | gap 1 GGCAGCAGCGGCACC TGCACCCGAA CCACTC TTCGG-TGCA TTTTTAGCGTTTGCC TERM 1250 1113224 - 1113246 + g 100 -9 -5.46657 | opp_overlap 1113212 1113210, overlap 1113226 1113238 TCATCAACATCCGTT GAGGCAGCCG CTT CTGCTGCCGC TTTTTTCTTGGCCTC TERM 1251 1113226 - 1113244 + g 70 -10.2 -2.91061 | opp_overlap 1113210, overlap 1113224 1113238 ATCAACATCCGTTGA GGCAGCCG CTT CTGCTGCC GCTTTTTTCTTGGCC TERM 1252 1113284 - 1113294 + g 80 -2.4 -5.38047 | GCAGCAACTTTTTTA GCAG CAG CGGC TTTTTTCTCTGCATC TERM 1253 1113401 - 1113420 + g 76 -3.4 -5.15969 | overlap 1113404 GCTTGTTTCTTCGCC GCAGCGGC AACA GCAGCTTC TTTTTTGGCTTCAGC TERM 1254 1113610 - 1113623 + g 76 -3.1 -5.11254 | TTCAGCGGCCTGCTT TTGCT GTTC AGCGA TTTGTTTTTGTTGTT tolR 1114566 - 1114138 - | colicin uptake protein TolR tolQ 1115265 - 1114579 - | colicin uptake protein TolQ fcbC2 1115666 - 1115265 - | acyl-CoA thioester hydrolase YbgC TERM 1255 1115778 - 1115751 - R 76 -7 -4.57218 | opp_overlap 1115749, overlap 1115754 1115755 AGAATAGAACGAAAA TAATTATGGGCC GGAT GGCCCATAGGTA GGATTGTGCTCAAGG TERM 1256 1115775 - 1115754 - R 86 -8.7 -4.36586 | opp_overlap 1115749, overlap 1115751 1115755 ATAGAACGAAAATAA TTATGGGCC GGAT GGCCCATAG GTAGGATTGTGCTCA TERM 1257 1115774 - 1115755 - R 86 -12.2 -3.20325 | opp_overlap 1115749, overlap 1115754 1115751 TAGAACGAAAATAAT TATGGGCC GGAT GGCCCATA GGTAGGATTGTGCTC YP_1037 1116058 - 1115798 - | hypothetical protein TERM 1258 1116050 - 1116034 - G 80 -10.8 -3.69323 | opp_overlap 1116034 CGAGCACCAGTGAAA GGGCCC TCAAT GGGCCC TTATCCATTAATTCG TERM 1259 1116034 - 1116050 + g 75 -10.8 -3.45134 | opp_overlap 1116034 CGAGCACCAGTGAAA GGGCCC TCAAT GGGCCC TTATCCATTAATTCG cydB 1117361 - 1116222 - | cytochrome D ubiquinol oxidase subunit II TERM 1260 1117217 - 1117236 + g 82 -7.2 -4.60487 | opp_overlap 1117217 CAATCGAGTTAATCA TGATACGG CGCT CTGTATCA TTTTTACCGATGATA cydA 1118944 - 1117376 - | cytochrome D ubiquinol oxidase subunit I TERM 1261 1118900 - 1118884 - G 76 -5.1 -4.87786 | TTAATGGGACAAAAA GGAAATG GTA CATTGCC GTTAAGGCAAACTGT TERM 1262 1119206 - 1119185 - R 70 -8.1 -3.62046 | opp_overlap 1119185 1119184 GCATTTTGGTAACAA TGTCGTAAA TTGA TCTACGACA ATTTAAGCCTATATG TERM 1263 1119409 - 1119425 + r 70 -3.7 -4.7889 | overlap 1119404 TAAATTCAGAGTGAG TCAAATC ACA GTTTTGA TTTTTACATATTTAT TERM 1264 1119664 - 1119647 - R 100 -12.7 -5.252 | opp_overlap 1119645 CATTTGTATAAAAAA GGCCACC AAAA GGTGGCC AGTATGTCGCGTTAG sucD 1120583 - 1119711 - | succinyl-CoA synthetase subunit alpha sucC 1121749 - 1120583 - | succinyl-CoA synthetase subunit beta TERM 1265 1121495 - 1121509 + g 74 -2.1 -5.08824 | overlap 1121496 TCCGTTGGCATCTGT TTGGT AAGTG ACCAG TTTTTTACCTAGCCA TERM 1266 1121777 - 1121790 + r 70 -9.5 -2.81045 | overlap 1121774 ATATAAGGTCTGAGA CGGGC CGAA GCCCG TAGTGTTCTGGATAA sucB 1123085 - 1121862 - | dihydrolipoamide acetyltransferase kgd 1125922 - 1123115 - | alpha-ketoglutarate decarboxylase TERM 1267 1124243 - 1124260 + g 74 -8.3 -4.08919 | AGAGCTGATCCGACG CGCCAGC TCTT GCAGGCG TTTCATTTCAACTTT TERM 1268 1125363 - 1125379 + g 83 -5.1 -5.12971 | opp_overlap 1125363 1125361, overlap 1125367 ACAACCGATTCAATA CGCTG CTGAATC CAGCG TTTTTCTTCGGTGTT TERM 1269 1125863 - 1125836 - G 76 -6.4 -4.68994 | gap 1, opp_overlap 1125836, overlap 1125838 AGGATCAGTTAAAAA GTC-TTCATAGAG CTG CTCTATGTAGGAC TGGTTCGCGCCCGCC TERM 1270 1126015 - 1126029 + r 70 -7.1 -3.75378 | AAACGGTTCACTCGA CGTGC TCAAT GCACG TTCTGTTATGGACCT TERM 1271 1126139 - 1126118 - R 86 -12.3 -2.53263 | opp_overlap 1126118 CCTACCGTGAAGCTA CCCGGAGAA TCCC CTCTCCGGG TTAATAAACTCACAT TERM 1272 1126118 - 1126139 + r 84 -11.6 -3.16683 | opp_overlap 1126118 CCTACCGTGAAGCTA CCCGGAGA ATCCCC TCTCCGGG TTAATAAACTCACAT sdhB 1126994 - 1126278 - | succinate dehydrogenase iron-sulfur subunit sdhA 1128810 - 1127044 - | succinate dehydrogenase flavoprotein subunit TERM 1273 1128089 - 1128058 - G 74 -11.6 -3.18264 | gap 1, opp_overlap 1128085 1128086, overlap 1128060 GCCTTCAGTCACTAA TACACCCGCACCGGC AAT ACCGGT-CGGGTGGA ACTGCCACATTTCCA TERM 1274 1128087 - 1128060 - G 86 -14.2 -3.1552 | gap 1, opp_overlap 1128085 1128086, overlap 1128058 CTTCAGTCACTAATA CACCCGCACCGGC AAT ACCGGT-CGGGTG GAACTGCCACATTTC sdhD 1129158 - 1128811 - | succinate dehydrogenase cytochrome b556 small membrane subunit sdhC 1129541 - 1129152 - | succinate dehydrogenase cytochrome b556 large membrane subunit gltA 1130251 - 1131531 + | type II citrate synthase TERM 1275 1131592 - 1131561 - T 79 -10.9 -3.09823 | opp_overlap 1131566, overlap 1131556 1131566 CCGCGTAAAATTAGA GCAAAGTCCCGGC TAGGAG GCCAGGACTTTGT TAGCAATTTGAGGCA TERM 1276 1131566 - 1131587 + T 76 -7.9 -4.19371 | opp_overlap 1131566 1131561 1131556 TAAAATTAGAGCAAA GTCCCGGCT AGGA GGCCAGGAC TTTGTTAGCAATTTG TERM 1277 1131587 - 1131566 - T 83 -9.4 -3.92694 | opp_overlap 1131566, overlap 1131561 1131556 TAAAATTAGAGCAAA GTCCCGGC TAGGAG GCCAGGAC TTTGTTAGCAATTTG TERM 1278 1131604 - 1131620 + T 85 -9.4 -4.19238 | TTGTTAGCAATTTGA GGCACC GTTGA GGTGCC TTTTAACGTTAGAGC grpE 1132217 - 1131639 - | heat shock protein GrpE ppnK 1132341 - 1133222 + | inorganic polyphosphate/ATP-NAD kinase recN 1133201 - 1134970 + | recombination and repair protein TERM 1279 1135356 - 1135340 - g 76 -3 -5.14563 | CTGGTCACGAAAAAA TAACGC AACAA ACGTTA ACGTTGACCTTTGAT smpA 1135075 - 1135425 + | hypothetical protein TERM 1280 1135556 - 1135578 + T 78 -4.1 -5.1101 | opp_overlap 1135557, overlap 1135557 1135560 GAGTGACAACAAAAA ATAAGGCGC TGATT GTGCCTTAC TTTTTTGCCTGCTCA TERM 1281 1135557 - 1135577 + T 70 -7.6 -3.65883 | opp_overlap 1135557, overlap 1135556 1135560 AGTGACAACAAAAAA TAAGGCGC TGATT GTGCCTTA CTTTTTTGCCTGCTC TERM 1282 1135577 - 1135557 - T 87 -5.4 -5.56673 | opp_overlap 1135556 1135557 1135560 AGTGACAACAAAAAA TAAGGCGC TGATT GTGCCTTA CTTTTTTGCCTGCTC YP_1053 1135859 - 1135575 - | hypothetical protein YP_1054 1136388 - 1135852 - | hypothetical protein smpB 1136435 - 1136929 + | SsrA-binding protein TERM 1283 1137414 - 1137388 - f 93 -12.2 -3.71527 | opp_overlap 1137388, overlap 1137382 GGTGAAGTACGGAAA GCCCGCATCCCT TCT AGGTTTGCGGGC TTTTTTGTGCCCAGA TERM 1284 1137388 - 1137414 + F 100 -12.2 -5.24129 | opp_overlap 1137382 1137388 GGTGAAGTACGGAAA GCCCGCATCCCT TCT AGGTTTGCGGGC TTTTTTGTGCCCAGA TERM 1285 1137451 - 1137433 - f 100 -16 -4.36914 | opp_overlap 1137433 TTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC TERM 1286 1137433 - 1137451 + F 100 -16 -3.07307 | opp_overlap 1137433 TTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC tnp_13 1137513 - 1138022 + | transposase for the IS1541 insertion element TERM 1287 1138090 - 1138134 + F 95 -12.9 -2.96216 | opp_overlap 1138103, overlap 1138096 1138100 1138102 1138103 ACAGAGCCTTATAGG CGCATATGAAAAACCTCCGGC TAT GCCGGAGGATATTTATTTGTG TCTGTAGTAGTCCAA TERM 1288 1138096 - 1138128 + F 100 -11.3 -4.18367 | opp_overlap 1138103, overlap 1138090 1138100 1138102 1138103 CCTTATAGGCGCATA TGAAAAACCTCCGGC TAT GCCGGAGGATATTTA TTTGTGTCTGTAGTA TERM 1289 1138100 - 1138124 + F 100 -9.9 -4.66625 | opp_overlap 1138103, overlap 1138096 1138090 1138102 1138103 ATAGGCGCATATGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTTGTGTCTGT TERM 1290 1138102 - 1138122 + F 100 -12.5 -3.92887 | opp_overlap 1138103, overlap 1138100 1138096 1138090 1138103 AGGCGCATATGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTTGTGTCT TERM 1291 1138103 - 1138121 + F 100 -16 -2.94105 | opp_overlap 1138103, overlap 1138102 1138100 1138096 1138090 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTGTGTC TERM 1292 1138121 - 1138103 - f 100 -16 -4.8048 | opp_overlap 1138103 1138102 1138100 1138096 1138090 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTGTGTC TERM 1293 1138320 - 1138334 + G 73 -2.8 -4.92756 | opp_overlap 1138316, overlap 1138318 CAAAGACCTAACCCT CCATGA TGG TGATGG TTTATTTTTGCTAGT intA1 1138213 - 1139445 + | prophage CP4-57 integrase TERM 1294 1139937 - 1139925 - g 73 -6.3 -4.47707 | opp_overlap 1139924 CCTCACTAAAAACAA CAAGT TAA ACTTG GCTTCATATAAACTG YP_1058 1139524 - 1140612 + | hypothetical protein TERM 1295 1140817 - 1140831 + G 76 -4.2 -5.03747 | overlap 1140819 TGATTTTTTGGACTT TTGGCT GTG AGCCCA TTTTTTCCGAGGTTT TERM 1296 1141398 - 1141382 - g 89 -2.3 -5.73339 | overlap 1141391 AGAATCAGAAAAAAA CAAAAAA AAC CTTCTTG AAGAAAGAACTAACT TERM 1297 1141405 - 1141391 - g 100 -5 -6.47325 | overlap 1141382 AAAAAACAAAAAAAA CCTTCT TGA AGAAAG AACTAACTTAAGAGT TERM 1298 1141444 - 1141429 - g 83 -5.4 -5.09173 | overlap 1141431 1141432 TAAGAGTTGAAAAAA TACGAC TTGA GTCGCA AATCAAATTAGCCAA TERM 1299 1141632 - 1141610 - g 73 -3.4 -5.055 | GGAACTTGCAAAAAA CCAACTCGAA TCC TTAGAGTCAG AAGTCAACGGAATAA TERM 1300 1141945 - 1141935 - g 70 -2.6 -4.91357 | AAATACATAACAAAA TTAA AAG TTAA CGTTGACATATCTAA smc1 1140663 - 1142333 + | hypothetical protein TERM 1301 1142478 - 1142520 + T 78 -7.1 -4.57569 | opp_overlap 1142494 CAGTTGTTTTAGCCG GGGCGTTGCATGCAAAT TCATGCACT ATATGCATGCAGTGCTC TTTTTGGCAGGCTAG YP_1060 1142722 - 1142495 - | hypothetical protein YP_1061 1142953 - 1143126 + | hypothetical protein YP_1062 1143218 - 1143508 + | hypothetical protein xerC1 1143521 - 1144417 + | putative DNA-binding prophage protein alpA1 1144410 - 1144610 + | transcriptional regulator YP_1065 1144610 - 1145152 + | putative prophage protein YP_1066 1145115 - 1146104 + | hypothetical protein YP_1067 1146101 - 1147189 + | putative regulatory prophage protein YP_1068 1147430 - 1147236 - | hypothetical protein YP_1069 1147858 - 1147538 - | putative DNA-binding prophage protein TERM 1302 1147591 - 1147602 + g 74 -4.4 -4.88228 | opp_overlap 1147591 CCGTTGCAGATACCA CACT AAGC AGTG TTTTTAGTGTTGGAT YP_1070 1148178 - 1147858 - | hypothetical protein TERM 1303 1148184 - 1148201 + H 80 -9.9 -3.58305 | opp_overlap 1148183 1148181 TTTTCATCAATATAT TGTAGCC TTTA GGCTACA TTTCGCAAGTTGATT TERM 1304 1148480 - 1148454 - H 93 -12.2 -3.71527 | opp_overlap 1148454, overlap 1148448 GGTGAAGTACGGAAA GCCCGCATCCCT TCT AGGTTTGCGGGC TTTTTTGTGTCTGTA TERM 1305 1148454 - 1148480 + H 100 -12.2 -5.4492 | opp_overlap 1148448 1148454 GGTGAAGTACGGAAA GCCCGCATCCCT TCT AGGTTTGCGGGC TTTTTTGTGTCTGTA TERM 1306 1148758 - 1148776 + H 100 -13.2 -4.01078 | CCAGGGGGTAATCTG CTCTCCTG ATT CAGGAGAG TTTATGGTCACTTTT YP_1072 1148780 - 1149802 + | transposase for insertion sequence IS100 TERM 1307 1149883 - 1149869 - g 77 -11.4 -3.3506 | overlap 1149860 TGGAAAGCCTTATAA GCGCAG CGC CTGCGC TGTCACAACAGGCAG YP_1073 1149799 - 1150581 + | transposase/IS protein trp1400A 1151128 - 1151391 + | IS1400 transposase TERM 1308 1151802 - 1151789 - T 78 -9.5 -3.737 | opp_overlap 1151787 1151784 CAACCTTCTACGAAA GGGGC GTTC GCCCC AATAGTTAATCAAGA YP_1076 1152073 - 1151822 - | hypothetical protein mhpC1 1152784 - 1153551 + | hypothetical protein YP_1078 1153883 - 1154170 + | LexA regulated protein TERM 1309 1154182 - 1154225 + F 73 -6 -4.43859 | opp_overlap 1154163 1154189, overlap 1154189 CTAACCCTGTCGGTT ACCACAACAGCGTGGTGTAA GTGA TTACGCCACGCTGTTATTAC TTTTATGCCGTTATG TERM 1310 1154218 - 1154189 - f 100 -15.1 -3.40403 | opp_overlap 1154182 1154189 TGTCGGTTACCACAA CAGCGTGGTGTAA GTGA TTACGCCACGCTG TTATTACTTTTATGC TERM 1311 1154189 - 1154218 + F 100 -17.3 -3.9978 | opp_overlap 1154189, overlap 1154182 TGTCGGTTACCACAA CAGCGTGGTGTAA GTGA TTACGCCACGCTG TTATTACTTTTATGC YP_1079 1154266 - 1154514 + | hypothetical protein fldA2 1154587 - 1155114 + | flavodoxin FldA TERM 1312 1155129 - 1155165 + F 71 -9.6 -3.06492 | opp_overlap 1155129 1155133, overlap 1155133 ATCTCCCCGCAACAA GAAACGCTCTGC GATAGTATTCACA GCAGAGCGTTTC TGTTCCAGTCACTGG TERM 1313 1155165 - 1155129 - f 100 -12.4 -3.61517 | opp_overlap 1155129 1155133, overlap 1155133 ATCTCCCCGCAACAA GAAACGCTCTGCGATA GTATT CACAGCAGAGCGTTTC TGTTCCAGTCACTGG TERM 1314 1155161 - 1155133 - f 78 -7.4 -4.44667 | opp_overlap 1155133 1155129, overlap 1155129 CCCCGCAACAAGAAA CGCTCTGCGATA GTATT CACAGCAGAGCG TTTCTGTTCCAGTCA fur 1155482 - 1155928 + | ferric uptake regulator TERM 1315 1156258 - 1156240 - T 100 -11.7 -5.40072 | TTTCGGGCAAAAAAA TCCCCGG ACCAG CCGGGGA AATACGATCAACTCA TERM 1316 1156858 - 1156828 - T 76 -10.4 -3.05844 | overlap 1156841 CGTTTCATTCCAAGA CTGACCGGAGATAC CCT GTACACCCGGCCAG GGTTTATCACTCTTC YP_1083 1160782 - 1159361 - | hypothetical protein TERM 1317 1160406 - 1160424 + g 71 -7.4 -4.11623 | TCGTCCCAGCGGGTT TTGGCGTC ACT GAAGCCAA TTTCATTTGGTGCTG TERM 1318 1161465 - 1161446 - R 100 -10.7 -5.43414 | opp_overlap 1161444 ATCAGAGACAAAAAA GGCGTGG ACTGTG CCACGCC AATTGAATCTGAGCG glnS2 1163155 - 1161488 - | glutaminyl-tRNA synthetase TERM 1319 1163279 - 1163256 - R 100 -15.4 -6.17669 | opp_overlap 1163256 AACAAAACAAAAAAA CGGGAAGAGA TCGC TCTCTTCCCG TTGGTTCGATTAAAA TERM 1320 1163256 - 1163279 + r 100 -15.4 -3.4052 | opp_overlap 1163256 AACAAAACAAAAAAA CGGGAAGAGA TCGC TCTCTTCCCG TTGGTTCGATTAAAA nagE 1165403 - 1163370 - | pts system, N-acetylglucosamine-specific IIABC component nagB 1165803 - 1166603 + | glucosamine-6-phosphate deaminase TERM 1321 1166995 - 1166985 - g 80 -2.4 -5.42862 | ATATCTGCAAAAAAA CCAG CAT CAGG CGCTCGGCTTGCACC nagA 1166623 - 1167768 + | N-acetylglucosamine-6-phosphate deacetylase nagC2 1167746 - 1169011 + | putative N-acetylglucosamine regulatory protein TERM 1322 1169356 - 1169342 - f 74 -4.2 -5.06451 | CAGGATGGCAAAAAA GCCTAT GTT ATTGGC GAGGGTGCTTGAGTT asnB 1170191 - 1171855 + | asparagine synthetase B TERM 1323 1171886 - 1171869 - T 78 -9.8 -3.53189 | AATTGAACACGATAA GCGGGG TTAATC CCCCGC GCCGACTGCTGACAA YP_1091 1172041 - 1171904 - | hypothetical protein TERM 1324 1172063 - 1172039 - G 70 -11.4 -2.50385 | opp_overlap 1172039, overlap 1172038 1172034 1172042 ATAGAGAATAGATAG CAAGGTCGCC TCTGG GGCGGCCTTG TTTTTTTACGTCACC TERM 1325 1172039 - 1172063 + g 100 -14.3 -5.47218 | opp_overlap 1172039 1172038 1172034 1172042 ATAGAGAATAGATAG CAAGGTCGCCT CTG GGGCGGCCTTG TTTTTTTACGTCACC TERM 1326 1172574 - 1172536 - R 79 -11.7 -2.53911 | opp_overlap 1172527 1172539 CCAAGCGGTAAGGCA CCAGGTTTTGATCCTGG CATTC CCAGGTTCGAATCCTGG TATCCCAGCCATCTT TERM 1327 1172732 - 1172694 - R 79 -11.7 -2.53911 | opp_overlap 1172697 CCAAGCGGTAAGGCA CCAGGTTTTGATCCTGG CATTC CCAGGTTCGAATCCTGG TATCCCAGCCATACA TERM 1328 1172959 - 1172944 - R 73 -6 -4.51196 | opp_overlap 1172944, overlap 1172939 GCCAAATTTAGAAAA GCTCGC TTCG GCGGGC TTTTTGCTTTTTCAT TERM 1329 1172944 - 1172959 + r 100 -8.2 -5.1971 | opp_overlap 1172944 1172939 GCCAAATTTAGAAAA GCTCGC TTCG GCGGGC TTTTTGCTTTTTCAT TERM 1330 1173148 - 1173124 - R 100 -16.5 -2.73364 | overlap 1173140 CCGTCAGCGGAATGA TGAGCCCGGCA GAA TACCGGGCTCA GGCAGAAAGGCAGTA ubiF 1174507 - 1173326 - | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase TERM 1331 1174537 - 1174552 + H 70 -5.4 -4.52589 | opp_overlap 1174551, overlap 1174538 AAAAGTGAATGTACT TCTTGC ATTA GCAAGG TTTTGTCTAACCGCA miaB 1174635 - 1176173 + | putative tRNA-thiotransferase TERM 1332 1176247 - 1176270 + F 86 -6.7 -5.07652 | opp_overlap 1176249, overlap 1176249 TCCCGCCCGCGTAAC GAGGCACTG CATTGT CAGTGCCTG TTTTATTTTAGCGGG TERM 1333 1176249 - 1176268 + F 85 -9.3 -4.16397 | opp_overlap 1176249, overlap 1176247 CCGCCCGCGTAACGA GGCACTG CATTGT CAGTGCC TGTTTTATTTTAGCG phoH1 1176461 - 1177573 + | hypothetical protein YP_1095 1177570 - 1178043 + | putative metalloprotease TERM 1334 1178311 - 1178301 - gf 73 -5.4 -4.64676 | overlap 1178302 TGATTCTGAACAAAA CGAT CTG ATCG ATCCCGATACCCGAG corC 1178161 - 1179039 + | hypothetical protein TERM 1335 1179071 - 1179097 + GF 84 -11.6 -3.11701 | overlap 1179082 1179084 GCTCTATTCCTCCAA CGCCAGTGGG TTCGCGC CCTACTGGCG CTATTTTTTGGTGCC TERM 1336 1179082 - 1179100 + GF 86 -5.9 -5.17353 | overlap 1179071 1179084 CCAACGCCAGTGGGT TCGCGCC CTACT GGCGCTA TTTTTTGGTGCCTGT TERM 1337 1179084 - 1179098 + GF 79 -8.5 -4.2131 | overlap 1179071 1179082 AACGCCAGTGGGTTC GCGCC CTACT GGCGC TATTTTTTGGTGCCT lnt 1179008 - 1180594 + | apolipoprotein N-acyltransferase TERM 1338 1180813 - 1180825 + F 74 -4.1 -4.97666 | TAGTGCTTCCAGTCA CAGAT AAC GTCTG TTTTTCTCATCTGTT TERM 1339 1180867 - 1180887 + F 79 -11.2 -3.11178 | TCTATTTATACCTGA TAGCCCTG CACTC CAGGGCTA TATTCCGCTTAGTTC TERM 1340 1181497 - 1181481 - g 73 -5.1 -4.7416 | opp_overlap 1181484 GCAAAAGGTTAAAAA CAACGGT GTT ATCGTTG TGGGCCACCGTGAAT TERM 1341 1181802 - 1181791 - g 80 -4.4 -5.1675 | opp_overlap 1181792 1181793, overlap 1181793 TTACTCACCAAAAAA GACT CTGA AGTC AAAGACTTCAAAGAT TERM 1342 1181815 - 1181793 - g 91 -11.4 -4.2131 | opp_overlap 1181792 1181793, overlap 1181791 ACTCACCAAAAAAGA CTCTGAAGTC AAA GACTTCAAAG ATTTGGCAGGTAAAG glnH1 1181359 - 1182276 + | glutamate and aspartate transporter subunit TERM 1343 1182307 - 1182289 - f 77 -10.2 -3.07102 | overlap 1182286 TAACAATAATAATCA GGGCGGGT CAT ACCTGCCC TACCGATTGATGATG TERM 1344 1182367 - 1182341 - f 100 -15.2 -2.69468 | opp_overlap 1182341, overlap 1182338 TATTGGTAGACAGGA TGCGGGGTGG TCGTTCC CCACCCCGCA TTTTTTTGTCAACCC TERM 1345 1182341 - 1182367 + F 100 -15.2 -5.60993 | opp_overlap 1182341 1182338 TATTGGTAGACAGGA TGCGGGGTGG TCGTTCC CCACCCCGCA TTTTTTTGTCAACCC gltJ1 1182399 - 1183190 + | putative glutamate/aspartate transport system permease gltK 1183190 - 1183864 + | putative glutamate/aspartate transport system permease gltL 1183861 - 1184589 + | putative glutamate/aspartate transport ATP-binding protein TERM 1346 1184594 - 1184625 + T 87 -5 -5.49579 | overlap 1184595 1184598 TCTTGCATTAATTCG TTCTCCTCCCCTGC GTTT GTAGGGGAGGTCAC TTTTATTTTTTATGA TERM 1347 1184595 - 1184624 + T 75 -8.5 -3.87307 | overlap 1184594 1184598 CTTGCATTAATTCGT TCTCCTCCCCTGC GTTT GTAGGGGAGGTCA CTTTTATTTTTTATG TERM 1348 1184598 - 1184621 + T 100 -14.6 -2.95933 | overlap 1184595 1184594 GCATTAATTCGTTCT CCTCCCCTGC GTTT GTAGGGGAGG TCACTTTTATTTTTT tar2 1185223 - 1184723 - | hypothetical protein TERM 1349 1187391 - 1187374 - g 70 -3.4 -4.85599 | opp_overlap 1187378 GTCATGGTAGAAAAA TACGGC GCGGAT ACCGTA CGTCTGTTTATGATG leuS 1185466 - 1188048 + | leucyl-tRNA synthetase TERM 1350 1188090 - 1188124 + G 71 -6.3 -4.34402 | ATTCTGACGTTGTTG CTGGGGTTGGCGGTG CTGGT CACCGCTGGCTGCGG TTTTAATCTGCGGGG rlpB 1188063 - 1188686 + | LPS-assembly lipoprotein RplB TERM 1351 1188711 - 1188738 + GF 80 -9 -3.98649 | opp_overlap 1188707, overlap 1188712 ACCCTGAACAACTTG TCGCGCAGCTCC ATGA GGGGCTACGCGC TTGTTATCTATTGTG TERM 1352 1188712 - 1188737 + GF 93 -12.5 -2.98105 | opp_overlap 1188707, overlap 1188711 CCCTGAACAACTTGT CGCGCAGCTCC ATGA GGGGCTACGCG CTTGTTATCTATTGT holA 1188683 - 1189717 + | DNA polymerase III subunit delta nadD 1189677 - 1190369 + | nicotinic acid mononucleotide adenylyltransferase YP_1107 1190593 - 1190910 + | hypothetical protein YP_1108 1190914 - 1191384 + | SPOUT methyltransferase superfamily protein TERM 1353 1191845 - 1191832 - g 86 -8.1 -4.62471 | GCTAACTTTGAAAAA GAGCG CAAA CGCTC ACGTCGCTTTACCTC TERM 1354 1192541 - 1192515 - g 72 -3.6 -4.77036 | GGTTATCACCAAAAA CACCAGCCTG TTCGATC CTGGTTGGTG GCAACTGCCCGGTTC TERM 1355 1193164 - 1193187 + G 73 -8.9 -3.78022 | GTGGCAGAACACCTG CGCGACCAT AAGTTA ATGGTTGCG TTTGCTCCCTATGAG pbpA 1191466 - 1193361 + | penicillin-binding protein 2 TERM 1356 1194032 - 1194042 + G 70 -8.2 -3.76767 | overlap 1194030 1194031 ATCAATTCTGGTTGC GGCC TCC GGCC TGTTTGTGTTGTTCC ftsW1 1193532 - 1194644 + | cell wall shape-determining protein rlpA 1194654 - 1195736 + | rare lipoprotein A TERM 1357 1195817 - 1195780 - f 100 -14.3 -5.14163 | opp_overlap 1195777 1195791 1195812 ACTGACTAATAAAAA TAACCGTAACCGCCTGT GCAA ACAGGGTGTTACGGTTA AAACTGTTTGGGTGA dacA 1196139 - 1197341 + | D-alanyl-D-alanine carboxypeptidase fraction A TERM 1358 1197445 - 1197474 + F 72 -6.3 -4.3739 | opp_overlap 1197446, overlap 1197451 TATCTGGCGAACAGT ACGTCACTCCCGC TCCG GCGGGAGTTGTGA TTTTATAGCCGGATA TERM 1359 1197451 - 1197468 + F 100 -12.7 -3.72405 | opp_overlap 1197446, overlap 1197445 GCGAACAGTACGTCA CTCCCGC TCCG GCGGGAG TTGTGATTTTATAGC YP_1113 1197539 - 1197802 + | hypothetical protein lipB 1198026 - 1198715 + | lipoyltransferase TERM 1360 1198881 - 1198869 - f 80 -6.3 -4.90013 | GAATTTAATGAAAAA TCTCA AGT TGAGA GATTCAGAACTGGAA lipA 1198926 - 1199873 + | lipoyl synthase TERM 1361 1199907 - 1199889 - Tf 74 -9.6 -3.38046 | opp_overlap 1199889, overlap 1199874 1199887 1199890 GCGGTAGGCTAAAGA CTTCAGCC CAT GGCTGAAA TAACTTATTACACCT TERM 1362 1199906 - 1199890 - Tf 76 -10.9 -2.62613 | opp_overlap 1199889, overlap 1199874 1199889 1199887 CGGTAGGCTAAAGAC TTCAGCC CAT GGCTGAA ATAACTTATTACACC TERM 1363 1199945 - 1199965 + GT 100 -11.9 -5.93809 | opp_overlap 1199945 GCAGCCACCAAAAAA CGGATTTCC ATT GGAGATCCG TTTTTTTTATCAGCC TERM 1364 1199965 - 1199945 - gT 100 -9.7 -5.1675 | opp_overlap 1199945 GCAGCCACCAAAAAA CGGATTTCC ATT GGAGATCCG TTTTTTTTATCAGCC tatE 1200311 - 1200054 - | twin argininte translocase protein A YP_1116 1199898 - 1200134 + | hypothetical protein ccrB 1200872 - 1201261 + | camphor resistance protein CrcB TERM 1365 1201663 - 1201646 - Tf 100 -10.5 -5.28176 | opp_overlap 1201646 GCTACCCATAAAAAA CCCGCCC AGTA AGGCGGG TTTTTAAAGATATGG TERM 1366 1201646 - 1201663 + TF 100 -9.8 -4.61231 | opp_overlap 1201646 GCTACCCATAAAAAA CCCGCC CAGTAA GGCGGG TTTTTAAAGATATGG cspE 1201893 - 1201684 - | cold shock protein CspE YP_1119 1201675 - 1201908 + | hypothetical protein cspC1 1202169 - 1202651 + | hypothetical protein citB2 1203588 - 1202971 - | LuxR family regulatory protein TERM 1367 1203379 - 1203358 - G 81 -5.7 -5.05505 | opp_overlap 1203358 1203377, overlap 1203363 ATCACAAATCAAAAA GACATCCGC TTCT GCGGGGGTC TTATCCAGACGTTTG TERM 1368 1203479 - 1203503 + g 91 -2.9 -5.78622 | overlap 1203481 TAGAATTTAATCTCT TTTTTAAATCC TAA GGATGTGAAGA TTTTTTTTACGATAG YP_1123 1204011 - 1204976 + | hypothetical protein YP_1124 1205158 - 1205340 + | hypothetical protein YP_1125 1205552 - 1205358 - | hypothetical protein YP_1126 1205995 - 1206282 + | hypothetical protein mdlB2 1208193 - 1206298 - | putative ABC transport protein TERM 1369 1207736 - 1207714 - G 70 -10.6 -2.94695 | overlap 1207716 1207718 CTCAATAGATAATGA TAGACCGCCA GTC TGGCGCTCTA GGTGAAACCGCAAAC TERM 1370 1208585 - 1208574 - R 75 -3 -5.24551 | opp_overlap 1208574 TCAAACGAATAAAAA CAAA GAAA TTTG GTTATTTACAATGAA YP_1128 1209473 - 1208658 - | hypothetical protein TERM 1371 1209343 - 1209319 - G 70 -9.9 -3.1944 | opp_overlap 1209338, overlap 1209311 ATCAAAACCAGGCAA CGCTCATCGGG AAC CGCGGTGAGCG TCAGTGGCTGCCCTT iolE 1210541 - 1209483 - | hypothetical protein TERM 1372 1209689 - 1209700 + g 71 -5.8 -4.31329 | CACTCAACACCGCGT CCAG AAAA CTGG TTTTACGGTTTTTGA rbsK2 1212433 - 1210556 - | putative carbohydrate kinase TERM 1373 1212184 - 1212197 + g 74 -3.7 -5.05601 | TACTCAGGAGTACCA GCGCC GTGA GCCGC TTTTTATCTGTGGTC mviM1 1213694 - 1212558 - | hypothetical protein araH4 1214743 - 1213715 - | sugar transport system permease protein TERM 1374 1214664 - 1214653 - G 74 -2.2 -5.1244 | overlap 1214656 GCAGGAACATAAAAA TCAG GACG CCGA AGCGTTCAAAAAAAG rbsA1 1216302 - 1214755 - | sugar transport ATP-binding protein rbsB3 1217280 - 1216351 - | putative sugar-binding periplasmic protein TERM 1375 1217057 - 1217042 - G 70 -3.2 -4.84311 | gap 1, opp_overlap 1217050, overlap 1217043 GGCGAGACAATAAAA CCCTGCG CGC CAC-GGG TGATGGCATTTTCCA ilvB1 1220685 - 1218685 - | putative thiamine pyrophosphate-dependent protein TERM 1376 1218970 - 1218946 - GR 71 -10.1 -2.70525 | opp_overlap 1218963, overlap 1218941 1218951 TTGGGCGAAATCAAC GCAAATCAATG GGC CATTGAGTTGC CCCGACTCGTGGTTA TERM 1377 1218965 - 1218951 - GR 70 -7.2 -3.83214 | opp_overlap 1218963, overlap 1218946 1218941 CGAAATCAACGCAAA TCAATG GGC CATTGA GTTGCCCCGACTCGT TERM 1378 1219533 - 1219509 - GR 91 -12.9 -2.70932 | overlap 1219511 CTTTGGCCTCAATGA TATCGCCCTGC CAA GCAGTGCGATA ACCTGCCAGCCCTTC TERM 1379 1219531 - 1219511 - GR 77 -11.1 -2.90075 | overlap 1219509 TTGGCCTCAATGATA TCGCCCTGC CAA GCAGTGCGA TAACCTGCCAGCCCT TERM 1380 1219789 - 1219771 - GR 76 -11 -2.5655 | overlap 1219770 GCCAGTGACACCAAT TCCCCCCA AGT TGAGGGGA TGATCACTTGGCAGC putA1 1222171 - 1220645 - | putative aldehyde dehydrogenase rpiR3 1222498 - 1223352 + | hypothetical protein YP_1139 1223798 - 1223601 - | hypothetical protein YP_1140 1223980 - 1224534 + | hypothetical protein TERM 1381 1224589 - 1224567 - f 77 -10.6 -3.14344 | TACTTGCTGTACCAA CGCCCTGAAA CGC TCTCAGGGCA TGACTCTGCCATAGC TERM 1382 1226180 - 1226162 - g 79 -11 -3.61894 | AATCTGCTGCAACAA TCAACGCC GCT GGCGCTGA CCCTCAATGAGGCCG TERM 1383 1227016 - 1226999 - g 71 -5.5 -4.56597 | opp_overlap 1227002, overlap 1227004 TTCCTGGTGGAAAAA GAAGGGG ATGT CTCCTTC CTGCCCACCCGAGCC YP_1141 1224905 - 1230919 + | hypothetical protein TERM 1384 1230957 - 1230927 - f 83 -9 -4.23434 | gap 1, overlap 1230930 1230931 CAAAATAGCTGAAAA CAAC-GCGCCCCG CATCGC CGGGGCGCTATCG GATTTCAGCCGTAAC TERM 1385 1230953 - 1230930 - f 93 -10.9 -4.2142 | overlap 1230927 1230931 AATAGCTGAAAACAA CGCGCCCCG CATCGC CGGGGCGCT ATCGGATTTCAGCCG TERM 1386 1230952 - 1230931 - f 100 -14.4 -3.11767 | overlap 1230930 1230927 ATAGCTGAAAACAAC GCGCCCCG CATCGC CGGGGCGC TATCGGATTTCAGCC TERM 1387 1232664 - 1232685 + G 74 -7.2 -4.15114 | CAACAGCGCCTTTGT CGGTGCCG ATGCCG CCGCACCG TTATTCTTTAATATT mrcA2 1230976 - 1233339 + | putative penicillin-binding protein TERM 1388 1233511 - 1233485 - T 95 -8.1 -5.16237 | gap 2 AAGGGGATCAAAAAA GCCCCAC-A-GGT CAC ACCATTGTGGGGC AGCAATCTCGCGTTT nlp-2 1233854 - 1233552 - | putative regulator TERM 1389 1234246 - 1234222 - R 73 -5.7 -4.44355 | opp_overlap 1234222, overlap 1234224 TAATTCTAAAAATAA GTTGAATGGCT CAT ACCCATTCAGC TCTGGTCATCTTCTT TERM 1390 1234259 - 1234271 + r 78 -4.1 -5.24551 | overlap 1234267 AGCTCTGGTCATCTT CTTCG TAA TGAAG TTTTTCTTCATTTAA YP_1144 1234415 - 1234242 - | hypothetical protein TERM 1391 1234708 - 1234722 + G 100 -5.7 -5.76949 | CTATTTTTTCCTGTA CCGAT CCCAC ATCGG TTTTTTTTGGAAGTC YP_1145 1234470 - 1235051 + | hypothetical protein YP_1146 1235123 - 1235326 + | hypothetical protein TERM 1392 1235460 - 1235482 + GF 71 -4.8 -4.58859 | TTTTCATGGAAGGTT GGGTTTGTAA TAT TTGCAGTCCC TTTATTGTTCTATTT YP_1147 1235280 - 1235720 + | hypothetical protein YP_1148 1235759 - 1235959 + | hypothetical protein YP_1149 1235952 - 1236353 + | hypothetical protein hcp1 1236937 - 1236365 - | hypothetical protein TERM 1393 1236425 - 1236444 + g 73 -10.8 -3.25823 | opp_overlap 1236419 1236418 1236416 TATAAATATGTTCAA GCACACTT GAAA AAGTGTGC TTGATATCAGAAACG YP_1151 1237212 - 1236961 - | hypothetical protein YP_1152 1237490 - 1237251 - | hypothetical protein TERM 1394 1238216 - 1238238 + H 78 -9.8 -3.54926 | opp_overlap 1238220, overlap 1238214 GATAAACATAACGTT CAAACCGTCC CAA GGGCGGTGTG TCTCTTTTTACAATG TERM 1395 1238851 - 1238828 - g 82 -11.8 -3.53012 | gap 1, opp_overlap 1238819 1238827 1238838 CGGGTCTGGTCGAAA TCG-GCCCTTC CTG GAAGGGCACGA GTATCGTGCCGCTTC yapC 1238299 - 1240215 + | putaive autotransporter protein TERM 1396 1240330 - 1240304 - f 84 -10.1 -3.82218 | gap 1, opp_overlap 1240313, overlap 1240305 1240320 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 1397 1240331 - 1240305 - f 72 -10.1 -2.88849 | gap 1, opp_overlap 1240313, overlap 1240304 1240320 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT TERM 1398 1240407 - 1240428 + F 91 -6.5 -5.56264 | opp_overlap 1240404, overlap 1240410 CTTTGTCAATAACCT CAGCCCCTC TTCT GAGGGGTTA TTTTTTCTATTTCAC TERM 1399 1240410 - 1240425 + F 100 -10.4 -4.8277 | opp_overlap 1240404, overlap 1240407 TGTCAATAACCTCAG CCCCTC TTCT GAGGGG TTATTTTTTCTATTT TERM 1400 1240481 - 1240469 - f 95 -3.4 -6.28631 | TAAATTAAAAAAAAA TGCT CAGTC AGCA AGATAATTTCCACAA YP_1154 1240750 - 1241331 + | hypothetical protein TERM 1401 1241759 - 1241738 - T 84 -10.1 -3.74693 | TGCCACCGTATTAAA GGTGATCGC TCAG GCGGTCACC GAACTCGATAATAAA YP_1156 1242941 - 1241733 - | transposase for the IS285 insertion element YP_1157 1243196 - 1243357 + | hypothetical protein TERM 1402 1243967 - 1243978 + G 80 -3 -5.36441 | CGGTCTCTTTCTCAC TGTT CGAC AACA TTTTTTATCTCAACA proP11 1243393 - 1245600 + | hypothetical protein YP_1159 1245593 - 1246123 + | hypothetical protein TERM 1403 1246155 - 1246142 - f 82 -2.3 -5.72254 | overlap 1246147 TTAAACAATAAAAAA GAACC GTCT GGCCC CATGCCAACCCGTTA bglB 1246282 - 1248663 + | putative beta-glucosidase YP_1161 1250370 - 1248742 - | hypothetical protein TERM 1404 1249546 - 1249560 + g 70 -3.4 -4.8066 | AGCCCCCAGTAATAG CGGCGC ATC GGGCTG TTTTTGCATTGTCTT aRA11 1250801 - 1251694 + | putative aldo/keto reductase TERM 1405 1252555 - 1252533 - g 78 -6.2 -4.82901 | opp_overlap 1252516 TTGTTGGCACAAAAA CCTTGGATTG TGC CAATCCCCGG AACCACAAAACTGCA tas1 1251717 - 1252709 + | putative aldo/keto reductase TERM 1406 1252738 - 1252763 + T 100 -13.4 -3.15544 | opp_overlap 1252733 1252732 TCGCTCAAATTTCAT CTGGCTTACG ATAATC CGTAAGCCAG TTAATCCGAATAACG ptxR 1253657 - 1252764 - | LysR family transcriptional regulator TERM 1407 1253729 - 1253747 + H 100 -13.2 -4.01078 | CCAGGGGGTAATCTG CTCTCCTG ATT CAGGAGAG TTTATGGTCACTTTT YP_1165 1253751 - 1254773 + | transposase for insertion sequence IS100 TERM 1408 1254854 - 1254840 - g 77 -11.4 -3.3506 | overlap 1254831 TGGAAAGCCTTATAA GCGCAG CGC CTGCGC TGTCACAACAGGCAG dnaC_10 1254770 - 1255552 + | transposase/IS protein TERM 1409 1255773 - 1255785 + T 75 -9.1 -3.61232 | opp_overlap 1255771, overlap 1255771 CATTCTTAGTGAATT TGGCC GCT GGCCA TGTTTCTATCAAACA TERM 1410 1256639 - 1256607 - T 100 -11.3 -4.72631 | opp_overlap 1256614, overlap 1256611 1256613 1256614 ACTAACGCAATAAAA TAAATATCCTCCGGC ATA GCCGGAGGTTTTTCA TATGCGCCTATAAGG TERM 1411 1256635 - 1256611 - T 100 -9.9 -4.88795 | opp_overlap 1256614, overlap 1256607 1256613 1256614 ACGCAATAAAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCATATGCGCCTAT TERM 1412 1256633 - 1256613 - T 100 -12.5 -4.04859 | opp_overlap 1256614, overlap 1256611 1256607 1256614 GCAATAAAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 1413 1256614 - 1256632 + T 100 -16 -4.8048 | opp_overlap 1256613 1256611 1256607 1256614 CAATAAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 1414 1256632 - 1256614 - T 100 -16 -3.01288 | opp_overlap 1256614, overlap 1256613 1256611 1256607 CAATAAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC tnp_14 1257222 - 1256713 - | transposase for the IS1541 insertion element TERM 1415 1257284 - 1257302 + r 100 -16 -4.37092 | opp_overlap 1257284 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAT TERM 1416 1257302 - 1257284 - R 100 -16 -3.07307 | opp_overlap 1257284 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAT TERM 1417 1257341 - 1257323 - R 100 -11.7 -4.48987 | opp_overlap 1257318 1257317 TGGGCACAATGAAAA CCTCCGC CTAAT GCGGAGG TTACCCTTGATAATG rmf 1257536 - 1257369 - | putative ribosome modulation factor YP_1170 1257757 - 1257617 - | hypothetical protein TERM 1418 1257782 - 1257741 - G 71 -5.9 -4.3851 | overlap 1257742 GATATTAAATAGAAA CCCCCTTCCCCTGACAAGA TGAT TATTACCAGAGAAAGAGGA TTAGACTGATTTAGA YP_1171 1258384 - 1257806 - | putative lipoprotein protein pqiB1 1260060 - 1258381 - | paraquat-inducible protein B pqiA1 1261306 - 1260020 - | paraquat-inducible protein A uup2 1263348 - 1261435 - | ABC transporter ATPase component TERM 1419 1261572 - 1261552 - G 77 -9.1 -4.07568 | opp_overlap 1261571, overlap 1261556 GTGTGGGCGGGAAAA GAAATCAGT ATC ACTGACTTC AGCCTGTAACTTGCT TERM 1420 1261568 - 1261556 - G 76 -6.3 -4.64861 | overlap 1261552 GGGCGGGAAAAGAAA TCAGT ATC ACTGA CTTCAGCCTGTAACT YP_1175 1265474 - 1263354 - | 23S rRNA m(2)G2445 methyltransferase TERM 1421 1264459 - 1264471 + g 71 -6.2 -4.30576 | AGTGACAGACGCCAG CCGC CAAAT GCGG TTTTCATCATACGGC YP_1176 1265574 - 1266686 + | putative iron-sulfur binding protein YP_1177 1267263 - 1266712 - | hypothetical protein TERM 1422 1266989 - 1266974 - G 76 -7.6 -4.36914 | GGTTGCTGTACAAAA TGCCAA CTTT TTGGCA TGAGTGGTTTCAAGA pyrD 1268396 - 1267446 - | dihydroorotate dehydrogenase 2 pepN 1271680 - 1269065 - | aminopeptidase N TERM 1423 1271567 - 1271580 + g 74 -3.7 -5.03314 | TTTTACTTTACTGAC CGCCG TTAC CGTCG TTTTTTGCGCATCCA TERM 1424 1271833 - 1271816 - H 93 -4.1 -5.76949 | CAGTTGTAAAAAAAA CCTAGAT GAGA ACCCAGG CAACTCCGGCAAATA TERM 1425 1273332 - 1273317 - g 85 -7.6 -4.77036 | GCGCATTATGAAAAA TTGGGT ATTG ACCCAA TGAAAAAGGTATTGG pncB 1272369 - 1273619 + | nicotinate phosphoribosyltransferase asnC 1274133 - 1275533 + | asparaginyl-tRNA synthetase TERM 1426 1275567 - 1275597 + F 100 -9.8 -5.09426 | opp_overlap 1275570 1275575, overlap 1275568 1275570 1275575 AACGTCAATTTGTAC AAATAAAAGCCAGC TCT GCTGGCTTTTATCA TTTTTTAAAATTCGA TERM 1427 1275568 - 1275596 + F 100 -13.3 -3.64933 | opp_overlap 1275570 1275575, overlap 1275567 1275570 1275575 ACGTCAATTTGTACA AATAAAAGCCAGC TCT GCTGGCTTTTATC ATTTTTTAAAATTCG TERM 1428 1275594 - 1275570 - f 100 -15.9 -3.89614 | opp_overlap 1275568 1275567 1275570 1275575, overlap 1275575 GTCAATTTGTACAAA TAAAAGCCAGC TCT GCTGGCTTTTA TCATTTTTTAAAATT TERM 1429 1275570 - 1275594 + F 100 -15.9 -3.39328 | opp_overlap 1275570 1275575, overlap 1275568 1275567 1275575 GTCAATTTGTACAAA TAAAAGCCAGC TCT GCTGGCTTTTA TCATTTTTTAAAATT TERM 1430 1275589 - 1275575 - f 100 -11.4 -4.99043 | opp_overlap 1275570 1275568 1275567 1275575, overlap 1275570 TTTGTACAAATAAAA GCCAGC TCT GCTGGC TTTTATCATTTTTTA TERM 1431 1275575 - 1275589 + F 100 -11.4 -4.76171 | opp_overlap 1275575 1275570, overlap 1275570 1275568 1275567 TTTGTACAAATAAAA GCCAGC TCT GCTGGC TTTTATCATTTTTTA ompC2 1275816 - 1276919 + | putative outer membrane porin C protein TERM 1432 1276985 - 1276966 - f 95 -7.8 -5.09426 | opp_overlap 1276966 CCTAAGTTGAAAAAA GACAGGGC CTCG GCTCTGTC TTTTTGTTTCTATTT TERM 1433 1276966 - 1276985 + F 100 -10 -5.48623 | opp_overlap 1276966 CCTAAGTTGAAAAAA GACAGGGC CTCG GCTCTGTC TTTTTGTTTCTATTT TERM 1434 1277031 - 1277047 + F 73 -5.1 -4.62336 | overlap 1277004 1277003 AGATTACTCTGTCTA TCGGC CTATTTT GCCGA TTTTTCACCTCAGAT TERM 1435 1277593 - 1277580 - g 70 -2.3 -5.04325 | GCCAAACCATAAAAA CGTCT TCGA AGCCG CAGGGCTGGAAGTGG aspC 1277176 - 1278366 + | aromatic amino acid aminotransferase TERM 1436 1278421 - 1278404 - T 100 -11.3 -4.4767 | opp_overlap 1278407 TGACTGACCATAAAA GGATGGC CCAA GCCATCC TTCAGACTGCTGACA TERM 1437 1278511 - 1278485 - T 84 -10.1 -3.82218 | gap 1, opp_overlap 1278494, overlap 1278486 1278501 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 1438 1278512 - 1278486 - T 72 -10.1 -2.88849 | gap 1, opp_overlap 1278494, overlap 1278485 1278501 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT TERM 1439 1278617 - 1278586 - T 100 -14.6 -2.77013 | opp_overlap 1278593, overlap 1278593 CACTTTGTCAATAAC CTCAAAAGGATGGC CCAA GCCATCCTTTTGAC TGGTCACTCGATGAC TERM 1440 1278610 - 1278593 - T 100 -11.3 -4.24123 | opp_overlap 1278593, overlap 1278586 TCAATAACCTCAAAA GGATGGC CCAA GCCATCC TTTTGACTGGTCACT TERM 1441 1278593 - 1278610 + T 100 -11.3 -4.21462 | opp_overlap 1278593 1278586 TCAATAACCTCAAAA GGATGGC CCAA GCCATCC TTTTGACTGGTCACT TERM 1442 1278696 - 1278667 - T 74 -7.9 -3.94482 | opp_overlap 1278668 1278674, overlap 1278669 1278674 ATAAACGAAAGAGAA CACAAAAGACGCC TTCC GGCATCTTTTGCT ATTGAACATTCATCT TERM 1443 1278694 - 1278669 - T 100 -12.7 -3.53929 | opp_overlap 1278668 1278674, overlap 1278667 1278674 AAACGAAAGAGAACA CAAAAGACGCC TTCC GGCATCTTTTG CTATTGAACATTCAT TERM 1444 1278689 - 1278674 - T 82 -6.8 -4.80729 | opp_overlap 1278668 1278674, overlap 1278669 1278667 AAAGAGAACACAAAA GACGCC TTCC GGCATC TTTTGCTATTGAACA gloB1 1279437 - 1278790 - | metallo-beta-lactamase superfamily protein YP_1185 1280046 - 1279498 - | hypothetical protein TERM 1445 1280298 - 1280285 - R 71 -2.3 -5.08601 | opp_overlap 1280296 TTATTGCAATAAAAA CTCAG CCTG CTGTG AGATTTGTGCACCAG YP_1186 1282126 - 1280270 - | hypothetical protein TERM 1446 1282336 - 1282304 - R 100 -11.3 -5.26918 | opp_overlap 1282311, overlap 1282310 1282311 AGATGTTACAAAAAA TAAATATCCTCCGGC ATA GCCGGAGGTTTTTCA TATGCGCCTATAAGG TERM 1447 1282330 - 1282310 - R 100 -12.5 -4.17307 | opp_overlap 1282311, overlap 1282304 1282311 TACAAAAAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 1448 1282329 - 1282311 - R 100 -16 -3.07944 | opp_overlap 1282311, overlap 1282310 1282304 ACAAAAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 1449 1282311 - 1282329 + r 100 -16 -4.8048 | opp_overlap 1282310 1282304 1282311 ACAAAAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC tnp_15 1282919 - 1282410 - | transposase for the IS1541 insertion element TERM 1450 1282999 - 1282981 - R 100 -16 -3.07307 | opp_overlap 1282981 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAT TERM 1451 1282981 - 1282999 + r 100 -16 -4.37092 | opp_overlap 1282981 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAT TERM 1452 1283039 - 1283020 - R 90 -7.1 -5.18726 | opp_overlap 1283020 TGGGCACAATAAAAA TGGCCGC TTCTGT GCGACCA TTTAATAAAACTAAT mukB 1287541 - 1283084 - | cell division protein MukB TERM 1453 1284147 - 1284161 + g 72 -8.5 -3.82603 | TCACGGCGGTGCAAG CGGCG CTCAA CGCCG TTATCTTTCACCATT TERM 1454 1286896 - 1286886 - G 71 -6.8 -4.20367 | overlap 1286887 TCTGGCAATAAATAA TCGC GTA GCGA GCGAGTAATGGCGCT mukE 1288239 - 1287538 - | condesin subunit E mukF 1289569 - 1288247 - | condesin subunit F smtA2 1290357 - 1289566 - | putative metallothionein SmtA TERM 1455 1289981 - 1289949 - G 70 -4.2 -4.7373 | gap 1, opp_overlap 1289949 1289953, overlap 1289952 1289953 1289962 TTAGCGTATCAAAAA GTATTTGCAGAACCT GCTG AGGTTCAGC-AATCC ATTCTAATACCGCAT TERM 1456 1290070 - 1290084 + g 70 -4.2 -4.7373 | overlap 1290072 TTGTATAAATTGCAT GTTGTG GCT CACACC TTTTTCGTGAGCTGC YP_1192 1292056 - 1291124 - | hypothetical protein TERM 1457 1292359 - 1292335 - R 100 -12.1 -4.15703 | opp_overlap 1292331 GGTTAGAAATAACAA CGCCAGAGCCC GGT AGGTTCTGGCG TAAAGTTTCCGTCGC kdsB 1293132 - 1292380 - | 3-deoxy-manno-octulosonate cytidylyltransferase YP_1194 1293362 - 1293129 - | hypothetical protein TERM 1458 1293853 - 1293833 - R 100 -12.6 -4.00468 | opp_overlap 1293833 ACGAGAAGGGAGAAA CGGCTACC GATGA GGTAGCCG TTTGCTTAGAAAGCG TERM 1459 1293833 - 1293853 + r 100 -12.6 -3.90112 | opp_overlap 1293833 ACGAGAAGGGAGAAA CGGCTACC GATGA GGTAGCCG TTTGCTTAGAAAGCG cspE2 1294092 - 1293859 - | cold shock-like protein TERM 1460 1294184 - 1294199 + H 71 -4.6 -4.70046 | opp_overlap 1294185, overlap 1294185 TGATTTTATGAAAAA ACCGCA TAAT TGCGGG TTTTGTAATTTTGTC TERM 1461 1294198 - 1294185 - H 95 -8.1 -5.15634 | opp_overlap 1294184 1294185 GATTTTATGAAAAAA CCGCA TAAT TGCGG GTTTTGTAATTTTGT TERM 1462 1294227 - 1294249 + H 74 -4.3 -4.93877 | gap 1 GTCTATCTTGGTGAA TGATTA-GCA CGCT TGCATAATCA TTTTATTTCCTGAGA TERM 1463 1296171 - 1296140 - g 76 -11 -3.18681 | gap 1, overlap 1296144 1296145 CTGCAACTCTACGAA GCA-ACCCAGCAACG TTC CGTTGCTGAATGTGC AGCCGCCCTCAAACT TERM 1464 1296166 - 1296144 - g 75 -10.6 -3.40639 | overlap 1296140 1296145 AACTCTACGAAGCAA CCCAGCAACG TTC CGTTGCTGAA TGTGCAGCCGCCCTC TERM 1465 1296165 - 1296145 - g 73 -11.9 -2.63901 | overlap 1296144 1296140 ACTCTACGAAGCAAC CCAGCAACG TTC CGTTGCTGA ATGTGCAGCCGCCCT YP_1196 1294787 - 1296205 + | hypothetical protein lpxK 1297199 - 1296213 - | tetraacyldisaccharide 4'-kinase TERM 1466 1297005 - 1297015 + g 71 -6.8 -4.19238 | opp_overlap 1297004 TTCAACCAACCAGAT CACC ACC GGTG TTTTACCGTTCCCCC msbA 1298815 - 1297196 - | lipid transporter ATP-binding/permease protein TERM 1467 1298398 - 1298382 - G 74 -6.5 -4.33274 | CTGATATTACGAAAA CGTTTGG ATA CCAGACG GATCGAAATAGACAC TERM 1468 1298630 - 1298608 - G 70 -2.7 -4.78326 | GGTCAAAGAAAGAAA CAGGCATAC CCATC ATATGGCTG AATAAGCGGCGGCGG comEC 1301271 - 1298980 - | hypothetical protein TERM 1469 1301772 - 1301753 - R 100 -7.1 -5.81412 | opp_overlap 1301753 TTTACGCAAAAAAAA CGATGCC GATAAG GGCACCG TTTCGTATCAGCGTT ihfB 1302102 - 1301818 - | integration host factor subunit beta rpsA 1303836 - 1302163 - | 30S ribosomal protein S1 cmk 1304702 - 1304010 - | cytidylate kinase TERM 1470 1304511 - 1304494 - G 72 -4.1 -4.86731 | TTCTGTGAAACAAAA CGAACAT CGAG ATGTGCG GCAAGTGGTACCAAT TERM 1471 1304722 - 1304765 + r 76 -11.2 -2.59881 | opp_overlap 1304727 1304758, overlap 1304721 CTCTCCTTTCGGTAG GCAAACCTCT-TGTCTGCCC CCGGCA GGGCAGACACAGAGGTA-GC ATTATACGCTGCATC TERM 1472 1304761 - 1304727 - R 100 -15.9 -3.64703 | gap 1, opp_overlap 1304722 1304721, overlap 1304758 CTTTCGGTAGGCAAA CCTCT-TGTCTGCCCC CGGC AGGGCAGACACAGAGG TAGCATTATACGCTG aroA 1306301 - 1305015 - | 3-phosphoshikimate 1-carboxyvinyltransferase TERM 1473 1306470 - 1306423 - R 73 -9.8 -3.02511 | overlap 1306468 CTCATTGTTGCAAGA GGCCCATCGATCCGGAGCGGAT GAGT ACCCGCTCCAGAAAAATCAGCC ATGGCGGCGTTCAAA serC 1307550 - 1306465 - | phosphoserine aminotransferase TERM 1474 1307815 - 1307801 - R 75 -8.6 -3.86015 | opp_overlap 1307801 GACTGGGGTGACAAA TCTGCT GGG AGCAGA TTTGAACGCTGCTTG TERM 1475 1307801 - 1307815 + r 71 -8.6 -3.56568 | opp_overlap 1307801 GACTGGGGTGACAAA TCTGCT GGG AGCAGA TTTGAACGCTGCTTG YP_1205 1309785 - 1307917 - | hypothetical protein YP_1206 1310879 - 1309785 - | hypothetical protein TERM 1476 1309840 - 1309819 - G 76 -12.3 -3.0264 | overlap 1309809 AAACCCGCTGCAACA CCGACACCG CCTT CAGTGTCGG CAGAAACATTGACTC TERM 1477 1311136 - 1311109 - R 100 -13.6 -3.53343 | AATGTCTGGCGGAAA TTTTGCGAAGAC CGTA GCCTTCGCAAAA AAGTCACAGTATCAA ansB 1312185 - 1311148 - | L-asparaginase II TERM 1478 1312967 - 1312954 - g 86 -8.1 -4.62069 | GCGTTATGTGAAAAA CCGCA TTAT TGCGG AGTCCATCAGCTTGC YP_1208 1312325 - 1314100 + | hypothetical protein focA 1314796 - 1315653 + | formate transporter TERM 1479 1316131 - 1316117 - g 76 -2.8 -5.1925 | overlap 1316109 CCACAACTGAAAAAA GTCTTC ACC GAATAC CGTAAAACACATAAC pflB 1315637 - 1317991 + | formate acetyltransferase 1 TERM 1480 1318025 - 1318045 + T 100 -13.3 -4.3255 | opp_overlap 1318025 TGTTACAACATGAAA GGCTCCACA TAT TGTGGGGCC TTTATTCATTCAGAG TERM 1481 1318045 - 1318025 - T 90 -11.1 -3.97088 | opp_overlap 1318025 TGTTACAACATGAAA GGCTCCACA TAT TGTGGGGCC TTTATTCATTCAGAG YP_1211 1318783 - 1318109 - | hypothetical protein pflA 1319770 - 1320504 + | pyruvate formate lyase-activating enzyme 1 TERM 1482 1320578 - 1320616 + T 83 -11.2 -3.43033 | gap 3, opp_overlap 1320581 1320582, overlap 1320582 TTAGGTTTGGCCTAA CAACTGCCGCCATGCTGGA TGAA TCC-GC-TGGCGGC-GTTG TCTTATATATTGATA TERM 1483 1320582 - 1320613 + T 81 -9.5 -3.83668 | gap 2, opp_overlap 1320581 1320582, overlap 1320578 GTTTGGCCTAACAAC TGCCGCCATGCTGGA TGAA TCC-GC-TGGCGGCG TTGTCTTATATATTG proP12 1321806 - 1320658 - | MFS family transporter TERM 1484 1321994 - 1321972 - R 95 -4.9 -5.76633 | gap 1, opp_overlap 1321977, overlap 1321977 GGATACACAAAAAAA GAAAAGCGCC CGTA GACGCTTT-C GAAATAGCAGATAAC TERM 1485 1321990 - 1321977 - R 95 -5.9 -5.61277 | opp_overlap 1321977, overlap 1321972 CACAAAAAAAGAAAA GCGCC CGTA GACGC TTTCGAAATAGCAGA serS 1323345 - 1322053 - | seryl-tRNA synthetase TERM 1486 1322835 - 1322847 + g 73 -9.1 -3.72576 | GAGCACGGTGCATAC GGGCA ATT TGCCC TTTCATCACCACAAA TERM 1487 1322911 - 1322901 - G 70 -8.2 -3.71672 | opp_overlap 1322901 1322900 CGGCAGCAAAATCAA GGCC ACC GGCC ATTTCGCCCAGAGAA TERM 1488 1323574 - 1323598 + r 93 -9.9 -4.39828 | opp_overlap 1323563 1323562 1323586 TAATGCTAACCTTAC CGCAACCGCAA AGC TAGCGGTAGCG TTTTATCGGGCTATT YP_1215 1324930 - 1323587 - | recombination factor protein RarA TERM 1489 1323936 - 1323919 - G 73 -6.3 -4.44046 | CGCAGGCTAAATAAA CAATTGC CTGG GCAATCG CCCGCTCCCCTTCGG TERM 1490 1324883 - 1324866 - G 80 -10.5 -3.6715 | opp_overlap 1324864 TGATCCAACGTCAAA GGCCGCA TACG CGCGGCC AGTGGTTGAAACTCA lolA 1325549 - 1324941 - | outer-membrane lipoprotein carrier protein ftsK 1329659 - 1325742 - | putative cell division protein TERM 1491 1327674 - 1327655 - G 83 -10 -4.14004 | opp_overlap 1327667 CAACATAAGGAGAAA GCGTGAAC AGAG GCTCACGC GGGCTGTCATCGACT TERM 1492 1327995 - 1327965 - G 70 -9.1 -3.57144 | gap 1, opp_overlap 1327982 1327984, overlap 1327966 1327981 TTGCTGATCGGCAAA CGCTTTGC-GCAAG ATAG CCTGCTGCAAAGCA GCATCTTCATCAGAT TERM 1493 1328158 - 1328189 + g 71 -5 -4.54026 | opp_overlap 1328156, overlap 1328162 1328177 GTTGGAATACGAACC GGATTTGGCCGTGG CAAT TCAGGGCCAATACC TTGTTTTATTTGGGA TERM 1494 1328902 - 1328867 - G 72 -3.9 -4.77165 | GGGCTGAGAACAAAA CGTCATCATCGCCAT GGGCTA ACGCCGATGAGGCCG CAACACCCGCCCCCA TERM 1495 1329429 - 1329419 - G 71 -6.8 -4.13767 | TTGCGTAGGCTAAAA CACC AAA GGTG GAAAACAGCGTGTCA TERM 1496 1329724 - 1329698 - R 100 -15.2 -3.14463 | opp_overlap 1329694, overlap 1329701 AACGGGTCTGAGCAA CAACGCCGAGAA GCC TCCCCGGCGTTG AAACTGTATGAATAA TERM 1497 1329721 - 1329701 - R 84 -11.1 -3.71848 | opp_overlap 1329694, overlap 1329698 GGGTCTGAGCAACAA CGCCGAGAA GCC TCCCCGGCG TTGAAACTGTATGAA lrp2 1330276 - 1329782 - | leucine-responsive transcriptional regulator TERM 1498 1329963 - 1329980 + g 70 -4.2 -4.65895 | GAGACCAAGTGACAC TCTTGA ATTTCC TCAAGA TTTTTAACTGCGGCA TERM 1499 1330956 - 1330976 + H 90 -4 -5.59357 | opp_overlap 1330956 CCTATCAAAAAAATT GCTAACAA CATTT TTGTTTGC TTTTTTTAATGTCAT TERM 1500 1331152 - 1331136 - g 70 -8 -3.66178 | opp_overlap 1331129 CGTGCCAACCTGAAA CCGGTA TTGAT TACCGG GATGGAAAAGGGCGG trxB 1331043 - 1332005 + | thioredoxin reductase TERM 1501 1332063 - 1332087 + F 100 -9.2 -5.53079 | overlap 1332064 TTCACCTCGTTCTAT ACGGGTGGCT ACATG GGCCACCCGC TTTTTTATCTGTTTT TERM 1502 1332064 - 1332086 + F 100 -12.7 -3.88187 | overlap 1332063 TCACCTCGTTCTATA CGGGTGGCT ACATG GGCCACCCG CTTTTTTATCTGTTT TERM 1503 1332524 - 1332513 - g 87 -7.2 -5.04249 | overlap 1332515 GGCTGAAAAAACAAA GCGC CCCC GCGC AACGTTGGCTCCGCC TERM 1504 1333311 - 1333332 + G 78 -3.7 -5.19212 | gap 1, overlap 1333312 1333312 TTGGTAGCTATGGCC TCGGCGTAAC GCT GTT-TGCCGG TTTTTTGGTGCTAAT TERM 1505 1334064 - 1334042 - g 73 -9 -3.72893 | CAGTTGGTGATGAAA GCGCTGGAGG AGG CCTCCCGTGC GCAGTCTACCCTGCT cydD 1332446 - 1334230 + | cysteine/glutathione ABC transporter membrane/ATP-binding component cydC 1334233 - 1335957 + | cysteine/glutathione ABC transporter membrane/ATP-binding component aat 1336152 - 1336886 + | leucyl/phenylalanyl-tRNA--protein transferase infA 1337052 - 1337270 + | translation initiation factor IF-1 TERM 1506 1337329 - 1337354 + T 100 -13.3 -4.36778 | overlap 1337346 GTAGTCCCCCTCCGG CGCCCTTCCCA TTTA TGGCAAGGGCG TTTTGCGTTATCTTT TERM 1507 1337564 - 1337540 - T 88 -9.9 -4.15788 | opp_overlap 1337543, overlap 1337542 1337543 AACGTTGGCAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCATATGCGCCTAT TERM 1508 1337562 - 1337542 - T 100 -12.5 -3.6761 | opp_overlap 1337543, overlap 1337540 1337543 CGTTGGCAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 1509 1337543 - 1337561 + T 100 -16 -4.8048 | opp_overlap 1337543 1337542 1337540 GTTGGCAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 1510 1337561 - 1337543 - T 100 -16 -2.80244 | opp_overlap 1337543, overlap 1337542 1337540 GTTGGCAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC tnp_16 1338151 - 1337642 - | transposase for the IS1541 insertion element TERM 1511 1338231 - 1338213 - R 100 -16 -3.07307 | opp_overlap 1338213 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAT TERM 1512 1338213 - 1338231 + r 100 -16 -4.37092 | opp_overlap 1338213 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAT TERM 1513 1338252 - 1338279 + r 100 -11.4 -4.7261 | gap 1, opp_overlap 1338252 TGGGCACAATAAAAA GGGCGATACGCTG TTT TAGC-TATCGCCC TTTATTTTACTGGAT TERM 1514 1338279 - 1338252 - R 100 -10.7 -5.18726 | gap 1, opp_overlap 1338252 TGGGCACAATAAAAA GGGCGATACGCT GTTTT AGC-TATCGCCC TTTATTTTACTGGAT clpA 1340660 - 1338378 - | ATP-dependent Clp protease ATP-binding subunit TERM 1515 1340673 - 1340685 + r 71 -4.8 -4.58395 | CACCTCCCAATAATT GCCT TAATC AGGC TTTTTCCAGCGTACA clpS 1341000 - 1340680 - | ATP-dependent Clp protease adaptor protein ClpS TERM 1516 1340922 - 1340945 + gr 76 -6 -4.73432 | gap 1, opp_overlap 1340922 1340927 GTATCACTTTATACA TCGAAGGCGGT TGA AGCGCCT-CGA TTTGTTTATCTTTGA YP_1227 1341175 - 1340969 - | hypothetical protein TERM 1517 1341394 - 1341408 + G 82 -8.6 -4.44046 | opp_overlap 1341393 1341394 AAATGGTTCAACAAC GCCAAA GGT TTTGGC TTTATTTGCCCTGAG cspD 1341361 - 1341624 + | cold shock-like protein TERM 1518 1341727 - 1341760 + T 100 -11.2 -4.63007 | opp_overlap 1341733, overlap 1341733 TACCTGTACTTTGAT TCAAAATGCCAGTC AATGAC GACTGGCATTTTTA TTTTATCTACTTCTA TERM 1519 1341754 - 1341733 - T 93 -10.9 -4.18494 | opp_overlap 1341733 1341727 TACTTTGATTCAAAA TGCCAGTCA ATGA CGACTGGCA TTTTTATTTTATCTA TERM 1520 1341733 - 1341754 + T 100 -10.2 -5.58522 | opp_overlap 1341733, overlap 1341727 TACTTTGATTCAAAA TGCCAGTC AATGAC GACTGGCA TTTTTATTTTATCTA YP_1229 1343854 - 1341905 - | macrolide transporter ATP-binding /permease protein acrA5 1344969 - 1343854 - | macrolide transporter subunit MacA YP_1231 1344999 - 1345175 + | hypothetical protein virK 1345203 - 1346150 + | putative virulence factor YP_1233 1347954 - 1346287 - | ATP-dependent endonuclease TERM 1521 1346542 - 1346525 - G 78 -2.6 -5.24129 | GCGCGGTATAAAAAA TGCTCC ATATCG GGTGCA GGCAAAATTGTTAGG TERM 1522 1347105 - 1347117 + g 83 -9.1 -4.42238 | GGGCATGAGGATCGA GGCTC AGT GAGCC TTTTGCTTGCAATAA TERM 1523 1347629 - 1347643 + g 76 -5.7 -4.72201 | opp_overlap 1347629 ACTCGATAGTAGATA CGATG TAACC CATCG TTATTTTTTATCCAC YP_1234 1348307 - 1349203 + | hypothetical protein TERM 1524 1349235 - 1349247 + F 76 -6.9 -4.44548 | overlap 1349229 AGTCGCCCCCCCCCC GCCCT CTG GGGGC TTTTCCTTCCCTATA TERM 1525 1349600 - 1349612 + G 70 -3.3 -4.83615 | overlap 1349596 CCAAATTGACAGCTT TGCCC CCA GAGCA TTTTTCTCAACGCTG hcp2 1349406 - 1351058 + | hydroxylamine reductase TERM 1526 1351073 - 1351107 + F 76 -10 -3.39288 | overlap 1351071 1351103 AGTTAATTATACCTT GCCTGGTCAATCGC CTTTCTC GCCGTTGACCGGGC TATTATTGCACGCTG hcr 1351124 - 1352194 + | HCP oxidoreductase, NADH-dependent TERM 1527 1353867 - 1353882 + G 70 -9 -3.58343 | opp_overlap 1353878 CTCTGAGTTAAATGC GGCACT GGAA AGTGCC TTTGCACATCCTGGC poxB 1352338 - 1354059 + | pyruvate dehydrogenase YP_1238 1354166 - 1354375 + | hypothetical protein ltaA 1354372 - 1355427 + | L-threonine aldolase YP_1240 1355424 - 1356914 + | hypothetical protein TERM 1528 1357207 - 1357197 - g 71 -6.8 -4.2349 | TCCTCACAGGCAAAA GCCA TGC TGGC GGATGTCGATACGCT wcaG3 1357014 - 1358021 + | nucleoside-diphosphate-sugar epimerase YP_1242 1358118 - 1358693 + | putative lipoprotein pheA2 1358863 - 1359423 + | chorismate mutase TERM 1529 1359454 - 1359482 + F 78 -8.8 -3.89354 | GGCCACACATCTTTC GTACCGGGTTCC TTCCC GTGGCCCGGTAC TTATTGATTTACAAA artP 1359718 - 1360446 + | arginine transporter ATP-binding subunit artI3 1360443 - 1361198 + | arginine-binding periplasmic protein 1 precursor TERM 1530 1361229 - 1361264 + G 82 -10.4 -3.89346 | gap 1, opp_overlap 1361235, overlap 1361230 ATGAATTTCAACCTT TAGCAAGTGCCGCCGGT ATG ACCGTCGGC-CTTGCCG TTTGTGCACTGGCAC TERM 1531 1361230 - 1361263 + G 76 -11.7 -2.93393 | gap 1, opp_overlap 1361235, overlap 1361229 TGAATTTCAACCTTT AGCAAGTGCCGCCGGT ATG ACCGTCGGC-CTTGCC GTTTGTGCACTGGCA artQ 1361210 - 1361926 + | arginine transporter permease subunit ArtQ artM 1361926 - 1362594 + | arginine transporter permease subunit ArtM TERM 1532 1362621 - 1362655 + T 100 -12.2 -3.90112 | opp_overlap 1362620 1362619 CCTTATGCGACAACG CCGGATCATCAACCAG AAA TTGCGTGATGATCCGG TTTCCTTAACGCCCC rhaT6 1363644 - 1362784 - | DMT family permease YP_1249 1365026 - 1363626 - | hypothetical protein smtA3 1365786 - 1364989 - | hypothetical protein TERM 1533 1365032 - 1365045 + gr 70 -8.1 -3.73775 | opp_overlap 1365030 1365031 ATAAGGTCATAAAGC CCGGT GGTC ACCGG TTTACTGGCGGTGCG fepC 1366559 - 1365774 - | putative transport ATP-binding protein TERM 1534 1365837 - 1365847 + g 70 -8.2 -3.70919 | CAATAAGTAGCGATA GCCC AAA GGGC TTGTTCCACTTTCGA btuC1 1367398 - 1366556 - | FecCD transport family protein fecB2 1368748 - 1367612 - | putative periplasmic binding protein TERM 1535 1367766 - 1367755 - G 70 -3 -4.89393 | CAAACTGCACAAAAA TGTA GTCG TACA ACGTGCGGACGCCGC TERM 1536 1367968 - 1367947 - G 72 -3.7 -4.82901 | CGCCCGCCAGAAAAA TTACCTCGG GTTT CTGAGATAA CACATACTCTGCGCG TERM 1537 1369086 - 1369051 - R 100 -11.8 -5.35459 | opp_overlap 1369047 ACAGATGATAAAAAA GCCCACTACACCACGA ATCT CCATGGGGAAGTGGGC TTCAGATTTATTGAT hflC3 1370041 - 1369115 - | SPFH domain-containing protein TERM 1538 1370410 - 1370394 - R 71 -6.7 -4.21974 | opp_overlap 1370376, overlap 1370377 1370376 TTATCATTTAACAAA TGATAAT GAA ATTATCA CCATGCTAATACCAG YP_1255 1370612 - 1370382 - | hypothetical protein artJ 1370833 - 1371591 + | arginine 3rd transport system periplasmic binding protein rumB 1372848 - 1371718 - | 23S rRNA methyluridine methyltransferase TERM 1539 1372263 - 1372275 + g 73 -9.1 -3.67597 | opp_overlap 1372258, overlap 1372260 CCTGATTAAACCGCT CAGGC AGG GCCTG TTGTTCGGTCAGCGG TERM 1540 1372829 - 1372814 - G 82 -10.4 -3.83226 | opp_overlap 1372814 AACCACTGACAAGAA CGGCAG CGAC CTGCCG TATACTGTGCGCAAT YP_1258 1373396 - 1372932 - | hypothetical protein TERM 1541 1373487 - 1373464 - R 100 -15.4 -3.30124 | overlap 1373467 TGTTATCTCTCACAA TAACGCCGCT CTAA AGCGGCGTTA AAGGAGACGAAAGAC TERM 1542 1373484 - 1373467 - R 100 -12.7 -3.7941 | overlap 1373464 TATCTCTCACAATAA CGCCGCT CTAA AGCGGCG TTAAAGGAGACGAAA potI 1374408 - 1373521 - | putrescine ABC transporter membrane protein potH 1375370 - 1374405 - | putrescine ABC transporter membrane protein potG 1376528 - 1375395 - | putrescine transporter ATP-binding subunit potF 1377925 - 1376699 - | putrescine ABC transporter periplasmic substrate-binding protein TERM 1543 1377187 - 1377177 - G 71 -6.8 -4.25458 | opp_overlap 1377182 AACTTCAGCAATAAA TCCG TCG CGGA GCCCGTGTAATCGGC TERM 1544 1377466 - 1377479 + g 70 -2.3 -4.98857 | opp_overlap 1377467, overlap 1377467 TGACCAGCGCCAGTA ACTCG GGGT CGAGA TTTTTCTCATTCGGT TERM 1545 1378267 - 1378231 - R 71 -5 -4.74013 | gap 1, opp_overlap 1378233 1378234 1378236, overlap 1378233 1378234 CGTAAATAGAGAAAA TAG-CCGCGTGCCGCTG ATAT CTGCGGCACACTGTCTT TATTCGGACACGTTC TERM 1546 1378264 - 1378233 - R 74 -7.8 -3.97364 | opp_overlap 1378233 1378234 1378236, overlap 1378231 1378234 TAAATAGAGAAAATA GCCGCGTGCCGCTG ATAT CTGCGGCACACTGT CTTTATTCGGACACG TERM 1547 1378263 - 1378234 - R 83 -11.3 -2.96792 | opp_overlap 1378234 1378233 1378236, overlap 1378233 1378231 AAATAGAGAAAATAG CCGCGTGCCGCTG ATAT CTGCGGCACACTG TCTTTATTCGGACAC TERM 1548 1378234 - 1378263 + r 75 -9.1 -3.6761 | opp_overlap 1378233 1378231 1378234, overlap 1378233 1378236 AAATAGAGAAAATAG CCGCGTGCCGCTG ATAT CTGCGGCACACTG TCTTTATTCGGACAC TERM 1549 1378236 - 1378261 + r 80 -10.3 -3.41738 | opp_overlap 1378234 1378233 1378231, overlap 1378234 1378233 ATAGAGAAAATAGCC GCGTGCCGCTG ATAT CTGCGGCACAC TGTCTTTATTCGGAC YP_1263 1378811 - 1378326 - | hypothetical protein TERM 1550 1378904 - 1378930 + r 76 -9.5 -3.41013 | TCCCGACTAATTTGA TATCTGGGCCG TTCCT CGGCTTAGATA TTCTCAATGTGCTTA YP_1264 1379267 - 1378953 - | hypothetical protein TERM 1551 1379894 - 1379881 - g 76 -4.5 -5.03314 | overlap 1379892 1379893 CTGATCTGGAAAAAA CGGTC GGTA AACCG GTTGAAACCGTGCCA grxA 1379730 - 1379993 + | glutaredoxin 1 TERM 1552 1380050 - 1380034 - f 95 -12.3 -3.33492 | opp_overlap 1380034 GCATTTATCCGATAA GGGTGTC CAA GACACCC TTTCTTTATTGCTGG TERM 1553 1380034 - 1380050 + F 100 -12.3 -4.70887 | opp_overlap 1380034 GCATTTATCCGATAA GGGTGTC CAA GACACCC TTTCTTTATTGCTGG TERM 1554 1380908 - 1380925 + G 74 -7.7 -4.18197 | CCCTGACTTATCTTA TCGGGCT GGTT AGCCTGA TTTTAGGTGCGCGCT YP_1266 1380403 - 1382091 + | hypothetical protein TERM 1555 1383121 - 1383133 + G 90 -9.1 -4.73613 | opp_overlap 1383121 GTTTCGGTCAAATAA TGCGC GGG GCGCA TTTTCTTACTCATAA TERM 1556 1383133 - 1383121 - g 75 -9.1 -3.90744 | opp_overlap 1383121 GTTTCGGTCAAATAA TGCGC GGG GCGCA TTTTCTTACTCATAA pgpB2 1382424 - 1383239 + | hypothetical protein pgpB3 1383239 - 1383844 + | undecaprenyl pyrophosphate phosphatase TERM 1557 1383870 - 1383894 + F 100 -15.1 -2.91264 | GTATTCGCTTCACAC TTGCCGGTTAG TCT CTGACCGGCAA TCTCTCCATGCGCCC deoC1 1384102 - 1384773 + | deoxyribose-phosphate aldolase TERM 1558 1384914 - 1384941 + F 100 -11.4 -4.36554 | ATTTTGTCAGTAGTC TAAGCCCGGT CCACAATT ACCGGGCTTA TTTATTATCGTACTG deoR3 1385108 - 1385767 + | DNA-binding transcriptional repressor DeoR TERM 1559 1385927 - 1385940 + F 70 -3.9 -4.83615 | opp_overlap 1385927 CGCTATGTTGGCAAA TAATC CATA GATTA TTTTTATACAGAATC TERM 1560 1387636 - 1387657 + G 78 -9.5 -3.82486 | opp_overlap 1387638 GAGCTTTGCCCACAT CATGATGGT TATC ACCGTCATG TTCTTCGTCTTCAGT TERM 1561 1387983 - 1387969 - g 74 -10 -3.59979 | TGTCGCGACCTTAAA CCCAAG TAT CTTGGG GATGATCGAAACATT sdaC2 1386845 - 1388167 + | serine transporter TERM 1562 1388204 - 1388236 + T 90 -5.6 -5.54403 | gap 1, overlap 1388206 CGTTTGATTAACCGC T-CCAGGCTGGCC ACTTCCAC GGCCAGCCTGTTA TTTTTCTTCTTTTTT TERM 1563 1388206 - 1388233 + T 100 -14.2 -4.74161 | overlap 1388204 TTTGATTAACCGCTC CAGGCTGGCC ACTTCCAC GGCCAGCCTG TTATTTTTCTTCTTT TERM 1564 1388449 - 1388480 + T 100 -10.3 -4.28791 | opp_overlap 1388455, overlap 1388455 CCCTGAGAAACATCC TAAAAAGCGCGAT AGTCAC ATCGCGCTTTCTA TTTATGTTATGGATT TERM 1565 1388474 - 1388455 - T 100 -10 -4.6856 | opp_overlap 1388449 1388455 GAAACATCCTAAAAA GCGCGATA GTCA CATCGCGC TTTCTATTTATGTTA TERM 1566 1388455 - 1388474 + T 95 -9.3 -4.45693 | opp_overlap 1388455, overlap 1388449 GAAACATCCTAAAAA GCGCGAT AGTCAC ATCGCGC TTTCTATTTATGTTA dacC 1389889 - 1388591 - | D-alanyl-D-alanine carboxypeptidase TERM 1567 1389053 - 1389027 - G 84 -10.9 -4.08887 | opp_overlap 1389039 ACCACGGAAATCAAA CGCATCGGC CCATCTGTC GCCGATGCG ACCAAATTATACCCC YP_1273 1390802 - 1390131 - | putative ABC transport integral membrane subunit TERM 1568 1390600 - 1390588 - G 71 -5.5 -4.55625 | AGTAACACCACAAAA GGCAT TGA ACGCC CCACATTGACCAGTG abc1 1391785 - 1390799 - | putative ABC transport ATP-binding subunit TERM 1569 1390882 - 1390857 - G 70 -9.1 -3.54307 | gap 1 AACACTTCGGCTAAA TTCAACCCGCCC TCT GGACG-GTTGAA ATCAACGTGCAAGCG nlpA1 1392606 - 1391782 - | hypothetical protein pcbC 1393901 - 1392834 - | putative iron/ascorbate oxidoreductase family protein TERM 1570 1393012 - 1392987 - G 75 -10.5 -3.494 | CAATGCGGCAGATAA TGGATACAGTG GCAC CACCGCATCCA AACGCGCACCTAAAA TERM 1571 1393479 - 1393510 + g 71 -7.2 -3.99324 | CCATTGGTTCGGGCC TTGCAGCCGTGTCC AACT GGGTGCGCCTGCGA TTTGTGGTAATGGGG TERM 1572 1394762 - 1394774 + G 75 -10.5 -3.37622 | CGCGAAACACTTTGC CGCCG ATA CGGCG TTATCAATCGGTGTT serB1 1394388 - 1395038 + | putative hydrolase gst1 1395138 - 1395812 + | putative glutathione S-transferase-family protein TERM 1573 1395907 - 1395857 - T 85 -9.3 -4.07885 | gap 1, overlap 1395858 CATTGCTGGTCAAAA TCCCGAATCACTTACTTATT-TTA AAGT CAACAACCAGTAAGTGATTCGGGT AAGTGCGCTCAGCTA TERM 1574 1395906 - 1395858 - T 95 -12.8 -3.04517 | gap 1, overlap 1395857 ATTGCTGGTCAAAAT CCCGAATCACTTACTTATT-TTA AAGT CAACAACCAGTAAGTGATTCGGG TAAGTGCGCTCAGCT yiuR 1398079 - 1396082 - | putative outer membrane receptor TERM 1575 1396737 - 1396749 + g 71 -10.5 -3.04398 | opp_overlap 1396735 1396736, overlap 1396736 TTACCCAGAATAAGT GCGGG AAG CCCGC CTTTTCCCCCACCAG TERM 1576 1397213 - 1397196 - G 71 -5.7 -4.3534 | opp_overlap 1397208, overlap 1397208 GTTGAATTACCAAAA TCATAAT AACC ATTATGA GTAACCGCATAATTA yiuC 1399127 - 1398339 - | putative siderophore ABC transporter, ATP-binding subunit yiuB 1400206 - 1399124 - | iron ABC transporter TERM 1577 1399307 - 1399293 - G 78 -6.4 -4.8622 | overlap 1399294 GCTGGTAAGTAAAAA CGGTGA TCT TCACCA AAAATCATGCGTGCG yiuA 1401525 - 1400401 - | putative periplasmic substrate-binding transport protein TERM 1578 1401610 - 1401596 - R 70 -5.8 -4.26832 | overlap 1401604 TAACAATAAAGCAAA TGATAA TAC TTATCA ATAAGATTGCCATAA TERM 1579 1401752 - 1401713 - R 100 -17.4 -3.51924 | gap 1, opp_overlap 1401703 1401715 1401723 TGTTCACGGATAGAA TG-CGCCAATACCAGCACA TTT CGTACTGGTATTGGCGTCA GTTACCGCTAATTTA TERM 1580 1401715 - 1401749 + r 100 -17.3 -2.53382 | opp_overlap 1401713, overlap 1401703 1401723 TTCACGGATAGAATG CGCCAATACCAGCAC ATTTC GTACTGGTATTGGCG TCAGTTACCGCTAAT TERM 1581 1401782 - 1401801 + r 93 -12.2 -3.73072 | opp_overlap 1401782 ATAGGCACTAAAGAA GGGCGATA GCGT TATCGCCC TTTCATCCGCACGTT TERM 1582 1401801 - 1401782 - R 100 -12.2 -4.01902 | opp_overlap 1401782 ATAGGCACTAAAGAA GGGCGATA GCGT TATCGCCC TTTCATCCGCACGTT lysP 1403343 - 1401832 - | lysine transporter TERM 1583 1402428 - 1402412 - G 73 -8.7 -3.79419 | opp_overlap 1402411 1402412 CCCGCCGATAAAACA GCGGTCA AAA TAACCGC ATTCATCACTGCCGC lysR6 1404473 - 1403601 - | putative DNA-binding transcriptional regulator TERM 1584 1403747 - 1403714 - G 84 -13.3 -3.44334 | gap 1, opp_overlap 1403724, overlap 1403728 GTAAAGGAATATTAA GCTCGACCAACTCACC GCT GGCGAGTTGATC-AGC AATCACTCGCCGCGA YP_1285 1405113 - 1406219 + | hypothetical protein TERM 1585 1406283 - 1406306 + F 100 -13.2 -3.75332 | overlap 1406286 CTAAAACAAACCGTT TAAGGGCCGT ATCC GCGGCCCTTA TTTCCCTTCACCGCT TERM 1586 1406286 - 1406303 + F 89 -10.5 -4.0098 | overlap 1406283 AAACAAACCGTTTAA GGGCCGT ATCC GCGGCCC TTATTTCCCTTCACC TERM 1587 1406907 - 1406897 - g 86 -8.2 -4.67608 | opp_overlap 1406896 1406897 GAGTGGAAGATAAAA GCCG CGT CGGC GTCTGTATTGATACC nfo 1406356 - 1407240 + | endonuclease IV TERM 1588 1407274 - 1407250 - T 100 -11.4 -4.4715 | overlap 1407252 TTGTAACGTAGAAAA TGCCCGCCAG TAAAC CTGGCGGGAA TTGAACCTGACGGGA TERM 1589 1407272 - 1407252 - T 93 -14 -2.56203 | overlap 1407250 GTAACGTAGAAAATG CCCGCCAG TAAAC CTGGCGGG AATTGAACCTGACGG psaC 1409840 - 1407327 - | outer membrane usher protein PsaC precursor TERM 1590 1409110 - 1409098 - G 73 -3.3 -5.00884 | overlap 1409099 ATGCTGTCGAAAAAA TCACC TGG GGTGT AACTCTCCCCTAAGG psaB 1410703 - 1409882 - | chaperone protein PsaB precursor TERM 1591 1410000 - 1409988 - G 72 -4.1 -4.90079 | ACCGGAATAATAAAA TCCCT AGA AGAGA ATGGCGGAACATAGC TERM 1592 1410002 - 1410020 + g 88 -3.8 -5.68438 | ATCCCTAGAAGAGAA TGGCGG AACATAG CTGCCA TTTTTTATTTCATCC TERM 1593 1410764 - 1410730 - R 95 -14 -2.84192 | opp_overlap 1410722 CACATTATCATGATA TTTTATTGTGAATTTT AAA AAAACTCACAATAAAA CATCAATAACAAAAA TERM 1594 1410821 - 1410780 - R 89 -6.7 -5.31855 | opp_overlap 1410783 1410784 1410786, overlap 1410782 1410784 CATCAATAACAAAAA CATACATAGAACATGACAG CAAG CCATCATGTTCTATGATTA CTCGTTATTTAAAAT TERM 1595 1410818 - 1410782 - R 86 -9 -4.27297 | gap 1, opp_overlap 1410783 1410784 1410786, overlap 1410780 1410784 TCAATAACAAAAACA TACATAGAACATGACAG CAAG CCATCATGTTCTATG-A TTACTCGTTATTTAA TERM 1596 1410784 - 1410817 + r 71 -9.7 -2.60492 | opp_overlap 1410782 1410780 1410784, overlap 1410783 1410786 AATAACAAAAACATA CATAGAACATGACAG CAAG CCATCATGTTCTATG ATTACTCGTTATTTA TERM 1597 1410817 - 1410784 - R 100 -14.1 -3.70836 | opp_overlap 1410784 1410783 1410786, overlap 1410782 1410780 AATAACAAAAACATA CATAGAACATGACAG CAAG CCATCATGTTCTATG ATTACTCGTTATTTA psaA 1411321 - 1410830 - | pH 6 antigen precursor (antigen 4) (adhesin) psaF 1412351 - 1411851 - | hypothetical protein TERM 1598 1411949 - 1411977 + g 80 -4.5 -5.08831 | opp_overlap 1411948, overlap 1411951 1411961 TGACATCAATAAAGC CTCTGTCACCATT AAA AAAGGTGACAACG TTATTTTTTTTATTA psaE 1412980 - 1412336 - | putative regulatory protein TERM 1599 1412549 - 1412528 - G 82 -6.7 -4.77036 | TCCTACCATGAAAAA TATGATGAT GATG ACCATCATA ATAGCGATAAAAAAG TERM 1600 1413119 - 1413142 + r 71 -8.4 -3.53224 | opp_overlap 1413117 1413128, overlap 1413117 GCACAAGATTAAGTC TTATTAAGAT TATT ATCTTAATAA TTTAACAAAAAAATA TERM 1601 1413246 - 1413221 - R 100 -13.4 -5.30686 | opp_overlap 1413221 AACACCCATAAAAAA TGCCAGTCAG AATTAA CTGACTGGCA TTTCAGACTGCTGAC TERM 1602 1413221 - 1413246 + r 100 -13.4 -3.58343 | opp_overlap 1413221 AACACCCATAAAAAA TGCCAGTCAG AATTAA CTGACTGGCA TTTCAGACTGCTGAC fruA 1415005 - 1413305 - | fructose-specific PTS system IIBC component fruK 1415958 - 1415020 - | 1-phosphofructokinase TERM 1603 1415841 - 1415861 + g 79 -6.8 -4.59853 | CGTTGATCCCTTTAC CCGCCG CATGCAGAC CGGCGG TTTTTACCAGATTGA fruB 1417088 - 1415955 - | bifunctional fructose-specific PTS IIA/HPr protein YP_1295 1417269 - 1417805 + | ADP-ribose pyrophosphatase araH5 1418916 - 1417918 - | putative ABC transport integral membrane subunit TERM 1604 1418205 - 1418191 - G 78 -3.5 -5.08601 | gap 1 CGATGCCAACAAAAA GCCAGC AAGT GC-GGC AAGGAACCCTGAAAT mglA3 1420526 - 1418952 - | putative ABC transport ATP-binding subunit TERM 1605 1419459 - 1419472 + g 74 -8.1 -4.07687 | opp_overlap 1419459 AATGCCAATATTGAA GGCCA TGCG TGGCC TTTTCGGCAGAGCCT TERM 1606 1420371 - 1420392 + g 70 -2.9 -4.8083 | gap 1, opp_overlap 1420374, overlap 1420371 1420373 1420374 GGTCGTCACGCCGCA C-AAGGCCTG CAC CGGGCCATAG TTTTTGCTGATATTC rbsB4 1421723 - 1420635 - | putative periplasmic carbohydrate-binding transport protein rpiA1 1422615 - 1421863 - | putative ribose 5-phosphate isomerase xylB1 1424164 - 1422593 - | putative carbohydrate kinase TERM 1607 1423639 - 1423624 - G 71 -6.8 -4.24204 | gap 1, overlap 1423625 CACGTACATCGAAAA GCC-CGG TCC CCGAGGC ATCCGAAACTTCAGT gabD1 1425664 - 1424168 - | putative aldehyde dehydrogenase TERM 1608 1425472 - 1425462 - G 79 -8.2 -4.2828 | overlap 1425463 GCCCAGGCAGGAAAA GCGC GAC GCGC CGCAGCAACCGCCTC mhpD1 1426015 - 1427157 + | hypothetical protein TERM 1609 1428079 - 1428111 + G 70 -11.1 -2.52464 | opp_overlap 1428071 CTGAAGAGGCCCTAC GGGGACTGCGCGGTG AGC CACTGCGCTGCCCAC TGACTTAAGGAGAAG serA1 1427154 - 1428119 + | putative D-isomer specific 2-hydroxyacid dehydrogenase family protein TERM 1610 1428285 - 1428307 + G 70 -11.3 -2.62613 | overlap 1428284 1428282 AGGGCTGGCGGCAAC CGGTGCGGA AGTGA TCTGCACCG ATATTTCACGTGAAC fabG4 1428130 - 1428945 + | putative short chain oxidoreductase YP_1305 1428923 - 1429297 + | hypothetical protein TERM 1611 1429611 - 1429592 - f 76 -7.8 -4.22375 | opp_overlap 1429596 ACTTAATATAAAGAA GTTACCCG CAGC CGGGTATC TCAGGAGCAATAGAT mtr 1429625 - 1430869 + | tryptophan-specific transport protein efp2 1430973 - 1431545 + | elongation factor P TERM 1612 1431629 - 1431659 + T 100 -14 -3.69482 | opp_overlap 1431638, overlap 1431630 CTATTGGGTCTCTCT ACGTTAAGAGCCGG AAA CCGGCCCTTAACGG TTATCTCTTCACTGA TERM 1613 1431630 - 1431658 + T 100 -17.5 -2.81207 | opp_overlap 1431638, overlap 1431629 TATTGGGTCTCTCTA CGTTAAGAGCCGG AAA CCGGCCCTTAACG GTTATCTCTTCACTG TERM 1614 1431650 - 1431638 - T 76 -10.5 -3.05844 | opp_overlap 1431630 1431629 CTCTCTACGTTAAGA GCCGG AAA CCGGC CCTTAACGGTTATCT uxuA 1432878 - 1431685 - | mannonate dehydratase TERM 1615 1431938 - 1431950 + g 85 -7.7 -4.83759 | CCTTGCAAATGCCCC CCTTC ATG GAAGG TTTTTGGATTTCCTT TERM 1616 1432934 - 1432916 - H 71 -3.2 -5.00467 | opp_overlap 1432928, overlap 1432908 GCAACAATAATAAAA TTAACC CGCTAAC GGTTAA AGCCGCCTTTTTCTG TERM 1617 1433197 - 1433209 + H 75 -3.4 -5.23292 | opp_overlap 1433197 CGAATATTATCAATA TTGG ACTTA CCAA TTTTATTTTCTGTCA TERM 1618 1434194 - 1434211 + G 71 -6.9 -4.2123 | GTCGCAGACTCTTGT GGGATCG CCTG CGAACCC TTTATTCAGTGGGTC mtlD1 1433444 - 1434916 + | putative D-mannonate oxidoreductase TERM 1619 1434925 - 1434959 + T 89 -11.6 -3.4314 | opp_overlap 1434923 1434926, overlap 1434923 1434926 GGCTTAAGACACACG ACGATGAGCTGAAT CAAGGCT ATTCAGCTCATCGG TATTGTTGGCGTTTA TERM 1620 1434958 - 1434926 - T 100 -15.1 -2.75975 | opp_overlap 1434925 1434923 1434926, overlap 1434923 GCTTAAGACACACGA CGATGAGCTGAAT CAAGGCT ATTCAGCTCATCG GTATTGTTGGCGTTT TERM 1621 1434926 - 1434958 + T 100 -15.1 -2.65161 | opp_overlap 1434926 1434923, overlap 1434925 1434923 GCTTAAGACACACGA CGATGAGCTGAAT CAAGGCT ATTCAGCTCATCG GTATTGTTGGCGTTT uxuR 1435806 - 1435045 - | putative transcriptional regulatory protein TERM 1622 1435931 - 1435903 - R 100 -15.5 -3.89524 | ACTTCAGGTGATAAA TCACGGTTTATCA CGT CGATAAACCGTGA TGCCCAAACATGTTG YP_1311 1436337 - 1435954 - | hypothetical protein TERM 1623 1437127 - 1437108 - g 70 -4.9 -4.68705 | overlap 1437097 1437094 ACAATGGCAACAAAA GCAGCCA TTATCG CGGCCGC TGTATCATAGCGAAT YP_1312 1436596 - 1437579 + | putative cobalamin synthesis protein pgpB4 1437638 - 1438339 + | hypothetical protein TERM 1624 1438951 - 1438899 - g 75 -9.1 -3.82865 | opp_overlap 1438897 TAAATAATACGCAAA CTGAGATGCGTGCAGTTAATGACAA AGA TGGGCTTTTACTGCAAGCCTCTCAG GATGAATTCGAAGCG TERM 1625 1439169 - 1439159 - g 71 -6.8 -4.1552 | opp_overlap 1439159 GATCTCGGCAAGAAA GTCC AGC GGAC TAAATTACGTCCAGG spr1 1438781 - 1439365 + | putative outer membrane lipoprotein TERM 1626 1439412 - 1439428 + F 100 -8.7 -5.4833 | opp_overlap 1439412 AACCAAACGTTGAAA CGCTGTT TAT GACAGCG TTTTTTATTGGCTCA TERM 1627 1439428 - 1439412 - f 70 -8 -3.65084 | opp_overlap 1439412 AACCAAACGTTGAAA CGCTGT TTATG ACAGCG TTTTTTATTGGCTCA rtn1 1440061 - 1441533 + | hypothetical protein oppA2 1441615 - 1443423 + | putative substrate-binding transport protein TERM 1628 1443929 - 1443910 - g 100 -10.7 -5.60993 | opp_overlap 1443909 CTGGGGATAAAAAAA GCGGTGC GCAATG GCACCGC CTTCGATACCTGGAG dppB2 1443433 - 1444533 + | putative ABC transporter integral membrane subunit dppC2 1444539 - 1445561 + | putative ABC transporter integral membrane subunit TERM 1629 1446496 - 1446476 - gT 77 -6.1 -4.58663 | opp_overlap 1446495 ACTATGCGCTAAAAA GCCTCAGTT TTG ACCTGAAGC CCGGCGAAAGTCTGG TERM 1630 1446592 - 1446617 + GT 71 -9.7 -2.71712 | opp_overlap 1446590 1446582, overlap 1446591 TCACAGGGTGAAATC TGGTTTAGCGG GCAA CCGCTGCACCA ATTTACCCCCAAACA YP_1319 1445530 - 1447155 + | putative ABC transporter ATP-binding subunit TERM 1631 1447200 - 1447179 - T 82 -5.8 -4.9792 | TAGCCTAGACAAAAA TGCCCGCG ATAGCA CACGGACA AACAGCTAAAAAGTA YP_1320 1447560 - 1447216 - | hypothetical protein TERM 1632 1447798 - 1447813 + r 95 -7.6 -5.00412 | CAGAAGCTGTAGATT TGGGAT TCAG ATCCCA TTTTTCGTTATATTT bcr 1449744 - 1448545 - | bicyclomycin/multidrug efflux system rsuA1 1450570 - 1449863 - | 16S rRNA pseudouridylate synthase A TERM 1633 1451126 - 1451136 + G 71 -6.8 -4.17048 | CGAGAAGCGGTCGAT GCCA CGG TGGC TTATTTTCGACGCCA TERM 1634 1451394 - 1451413 + G 73 -5.8 -4.59027 | gap 1, overlap 1451397 CGGTGGCCCGTAATC TGCCGCTAT TTG ATAGCG-CA TTTTCTCTGCTGATT sSL2 1451084 - 1452841 + | putative DEAD box helicase family protein rplY 1453003 - 1453287 + | 50S ribosomal protein L25 TERM 1635 1453348 - 1453324 - T 100 -9.9 -4.42806 | opp_overlap 1453327, overlap 1453326 1453327 GGACGCCGAAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCATATGCGCCTAT TERM 1636 1453346 - 1453326 - T 100 -12.5 -3.81958 | opp_overlap 1453327, overlap 1453324 1453327 ACGCCGAAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 1637 1453327 - 1453345 + T 100 -16 -4.8048 | opp_overlap 1453326 1453324 1453327 CGCCGAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 1638 1453345 - 1453327 - T 100 -16 -2.88452 | opp_overlap 1453327, overlap 1453326 1453324 CGCCGAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC tnp_17 1453935 - 1453426 - | transposase for the IS1541 insertion element TERM 1639 1453997 - 1454015 + r 100 -16 -4.36914 | opp_overlap 1453997 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 1640 1454015 - 1453997 - R 100 -16 -3.07307 | opp_overlap 1453997 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 1641 1454052 - 1454036 - R 100 -11.5 -5.93809 | opp_overlap 1454036 TGGGCACAAAAAAAA CCCCGCA TAG CGCGGGG TTTTTCACGAAAGAA TERM 1642 1454036 - 1454052 + r 100 -10.8 -4.56597 | opp_overlap 1454036 TGGGCACAAAAAAAA CCCCGC ATAGC GCGGGG TTTTTCACGAAAGAA ompA1 1455165 - 1454074 - | outer membrane protein A TERM 1643 1455185 - 1455209 + r 71 -5 -4.62336 | CTTTAAAAGCTAAGC CCTTGGTTAA AATTC TTCGCCAAGG TTTTTACGCTCCCGT sulA 1455999 - 1455493 - | SOS cell division inhibitor TERM 1644 1456128 - 1456147 + H 75 -5.8 -4.68506 | CATTTTATGTTTGGC TACGTAAT CCAT ATTGCGTA TTTTTGCAATTAGTT tfoX 1456141 - 1456863 + | hypothetical protein TERM 1645 1456937 - 1456955 + T 84 -11.7 -3.09933 | opp_overlap 1456936 1456937 ATGAAACCGTATAAT GGGCCAC GATGG GTGGCCC TTGGGTACCTTAGGC TERM 1646 1456955 - 1456937 - T 80 -11.7 -2.63747 | opp_overlap 1456937, overlap 1456936 ATGAAACCGTATAAT GGGCCAC GATGG GTGGCCC TTGGGTACCTTAGGC YP_1329 1459103 - 1456965 - | hypothetical protein TERM 1647 1457700 - 1457678 - G 71 -7.1 -4.19369 | gap 1, opp_overlap 1457681 ACGCAAAAAACAGAA CACCACTGAT CACA ATCAG-GGTG AGTTGCCCCTCAATA YP_1330 1459579 - 1459133 - | hypothetical protein TERM 1648 1459621 - 1459611 - H 71 -2.4 -5.08824 | opp_overlap 1459620 CGTTGAGTGAAAAAA CCGC AAT GTGG CTGAGCGATAGCCTA helD 1459773 - 1461827 + | DNA helicase IV TERM 1649 1461854 - 1461883 + T 86 -11.5 -3.29187 | gap 1, opp_overlap 1461859, overlap 1461859 1461878 AAGCGATGCTCAATA CTAAACCCGGTGGT TGA ACCACCGGGTG-AG TTACCTATTTTAGGT TERM 1650 1461879 - 1461859 - T 100 -16.9 -3.92592 | opp_overlap 1461854 1461859 1461878 ATGCTCAATACTAAA CCCGGTGGT TGA ACCACCGGG TGAGTTACCTATTTT TERM 1651 1461859 - 1461879 + T 100 -16.9 -2.58183 | opp_overlap 1461859, overlap 1461854 1461878 ATGCTCAATACTAAA CCCGGTGGT TGA ACCACCGGG TGAGTTACCTATTTT mgsA 1462352 - 1461888 - | methylglyoxal synthase YP_1333 1463211 - 1462531 - | hypothetical protein YP_1334 1463527 - 1463943 + | hypothetical protein TERM 1652 1464008 - 1463978 - T 100 -9.7 -5.00616 | overlap 1463979 GGGCTTTCTAAAAAA GCACCCTGTCAGC GTGCT GCTCACAGGGTGG CGAACCTGGCAATCA TERM 1653 1464007 - 1463979 - T 100 -13.2 -3.60048 | overlap 1463978 GGCTTTCTAAAAAAG CACCCTGTCAGC GTGCT GCTCACAGGGTG GCGAACCTGGCAATC YP_1335 1464393 - 1464052 - | hypothetical protein YP_1336 1465620 - 1464430 - | hypothetical protein TERM 1654 1464504 - 1464479 - G 73 -10.5 -3.2964 | gap 1, opp_overlap 1464495 AAACCTTCTGGATAA GCCGC-GATCAC TGG GTGATCCGCAGC TTGGCGGAACTGCTC TERM 1655 1465870 - 1465849 - g 70 -9.5 -3.33162 | gap 1 GATGGTAGCGTAGAA GTGG-TTGCC AGC GGCAATCCAC AAGCAGTTGAACGTC acyP 1465708 - 1465992 + | acylphosphatase dsrC 1466373 - 1466044 - | putative sulfite reductase YP_1339 1467103 - 1467408 + | putative transposase TERM 1656 1467598 - 1467610 + F 75 -2 -5.29782 | opp_overlap 1467598 TATATATCCAATATA TACT CACGA AGTA TTTTTTATGGATATA TERM 1657 1469205 - 1469223 + F 100 -13.2 -4.01078 | CCAGGGGGTAATCTG CTCTCCTG ATT CAGGAGAG TTTATGGTCACTTTT YP_1341 1469227 - 1470249 + | transposase for insertion sequence IS100 TERM 1658 1470330 - 1470316 - g 77 -11.4 -3.3506 | overlap 1470307 TGGAAAGCCTTATAA GCGCAG CGC CTGCGC TGTCACAACAGGCAG dnaC_11 1470246 - 1471028 + | transposase/IS protein TERM 1659 1471956 - 1471937 - T 91 -10.6 -4.08064 | AAGTTCGCCGTAAAA CCCCGTCC TTCA GGGCGGGG AGATAAGGCGCTGAG glcD2 1474408 - 1471979 - | putative oxidoreductase fabG5 1475296 - 1474550 - | putative short chain dehydrogenase TERM 1660 1474793 - 1474803 + g 74 -6.8 -4.28548 | AGTAGTCGCAACCTC CAGC GCT GCTG TTTTGGTCAATCCCT YP_1345 1475925 - 1476245 + | hypothetical protein fabZ1 1476509 - 1477033 + | putative myristoyl-acyl carrier dehydratase TERM 1661 1477245 - 1477263 + GF 71 -5.2 -4.56597 | ATTCCCGATATAGTT CTTTCCCG TGC CGAGAAGG TTTTTAAACAGACGA fabF3 1477023 - 1478306 + | putative beta-ketoacyl-[acyl-carrier-protein] synthase TERM 1662 1478301 - 1478314 + GF 74 -2.4 -5.07486 | TTTAGTCGATATCAT GGTT AACATG AACC TTTTTATTAGCGGTG fabG6 1478254 - 1479045 + | putative beta-ketoacyl-[acyl-carrier-protein] reductase TERM 1663 1479923 - 1479911 - gf 74 -4.1 -5.03715 | opp_overlap 1479911 ATTACGCGCAAAAAA TAGGC GCG ACCTA TTGTGGCAGCATTTT pksG 1479061 - 1480299 + | putative hydroxymethylglutaryl-coenzyme A synthase TERM 1664 1480577 - 1480587 + GF 70 -3.2 -4.87592 | GGGCTTGCCTTACTG TCGG TTG TCGA TTTTATTCTGTCTAG caiD1 1480241 - 1481011 + | putative enoyl-CoA hydratase caiD2 1480989 - 1481765 + | polyketide biosynthesis enoyl-CoA hydratase fabG7 1481768 - 1482556 + | putative short chain dehydrogenase YP_1353 1482595 - 1483083 + | hypothetical protein acpP1 1483121 - 1483369 + | putative acyl carrier protein fabD1 1483468 - 1484316 + | putative acyl transferase TERM 1665 1484890 - 1484865 - f 82 -4.8 -5.41143 | opp_overlap 1484867, overlap 1484867 CATTTCTGAAAAAAA TATTTGTAGG CGAATT CCTACAAATC ACTTCCCAAATTCCT TERM 1666 1484888 - 1484867 - f 75 -7.4 -4.34482 | opp_overlap 1484867, overlap 1484865 TTTCTGAAAAAAATA TTTGTAGG CGAATT CCTACAAA TCACTTCCCAAATTC YP_1356 1485302 - 1485805 + | hypothetical protein TERM 1667 1485893 - 1485871 - g 71 -6.3 -4.34402 | gap 1, overlap 1485872 GTCTGTACAGGAAAA CCGTGCGCAG GGTA CTGCG-ACGA CCGTATTAAAGAATA YP_1357 1485848 - 1487392 + | hypothetical protein YP_1358 1487404 - 1488756 + | hypothetical protein TERM 1668 1489043 - 1489060 + G 74 -2.6 -5.09225 | overlap 1489045 1489046 CTTCGTGTGGTGCCA TTCGCC CTTACA GGCGCA TTTTTTCAATACCCT YP_1359 1488753 - 1489439 + | hypothetical protein TERM 1669 1490526 - 1490556 + G 77 -10.4 -3.61398 | GGGTGGCCTTTGATA TCCGTCAGTACCAC AGC GTGGCGATGACGGA TTATTCCCCGAAAGC ompA2 1489439 - 1491175 + | hypothetical protein hcp3 1491179 - 1491670 + | hemolysin-coregulated protein (uncharacterized) TERM 1670 1491876 - 1491895 + F 100 -9.2 -5.72118 | opp_overlap 1491874, overlap 1491877 ACGTTGTCATCAACT TCAGGCGG TTCG CCGCCTGC TTTTTTGTGTTTTTT TERM 1671 1491877 - 1491894 + F 100 -12.7 -3.9778 | opp_overlap 1491874, overlap 1491876 CGTTGTCATCAACTT CAGGCGG TTCG CCGCCTG CTTTTTTGTGTTTTT TERM 1672 1492791 - 1492768 - g 71 -6 -4.40561 | overlap 1492765 CCGCCGTAAAAACAA CCCGATTC TGGTGGGT GAACCGGG TGTGGGGAAAACCGC clpA2 1492058 - 1494700 + | putative ATPase subunit of ATP-dependent protease vgrG1 1494703 - 1497051 + | hypothetical protein YP_1364 1497067 - 1499367 + | hypothetical protein uvrA2 1499364 - 1500137 + | hypothetical protein mdlB3 1500291 - 1500551 + | ABC-type multidrug/protein/lipid transport system, ATPase component TERM 1673 1500749 - 1500765 + G 91 -6.5 -5.09895 | overlap 1500745 1500752 GGAGCAAGTGCGTGC CATTGCC GAC GGCACTG TTTTTTCAGTACGTC TERM 1674 1502054 - 1502074 + G 84 -2.5 -5.55664 | opp_overlap 1502054 1502058, overlap 1502057 1502058 AAAATATTTAATCAA CACACCATT CCG AATGGCCTG TTTTTTTGGTAATGC TERM 1675 1502196 - 1502212 + G 76 -2.9 -5.09426 | AATATTTGGTATTAC CCGTG GTATGGG CGCGG TTTTTTGCAATTAAC YP_1367 1500567 - 1502750 + | hypothetical protein TERM 1676 1503159 - 1503145 - g 72 -3.6 -4.75518 | TATATAAAATTAAAA CTTTAC AAT ATAAAG TCCCCAAACTCTTTG YP_1368 1502923 - 1503393 + | hypothetical protein YP_1369 1504446 - 1504126 - | putative transposase TERM 1677 1505718 - 1505735 + G 86 -9.1 -4.44915 | AGTTCTGGTGGTTTG CCATCGG TATC CCGGTGG TTTTCTGGCTGGTTC YP_1370 1505669 - 1506790 + | hypothetical protein TERM 1678 1508270 - 1508258 - g 70 -10.5 -3.01791 | AGCTGCCCGCCAACA GCCCG CAA CGGGC AGCACGGGCAAAAAC TERM 1679 1508324 - 1508285 - g 73 -5 -4.60487 | CAGCACGGGCAAAAA CAGGCTATGACCAGTTAA AGGC TTATCTGATGATGGCCCG CCCGGAAAAAGCCGA TERM 1680 1508481 - 1508493 + G 71 -10.5 -3.14344 | opp_overlap 1508480 1508477 GGACTGGAAAATTAC CCCGG ATA CCGGG TTGATCAGCCAGGTG TERM 1681 1508741 - 1508726 - g 76 -6 -4.61199 | overlap 1508728 AGGCGATAGATAAAA CGGTGG CCTC CCGCCG CGAAGAAATTGACTG TERM 1682 1509186 - 1509165 - g 74 -6.5 -4.42653 | overlap 1509168 AGGCGATGCACAAAA CAGGCTGTC GTCG GACAGCTCG CTGAGCCTGCAAACG icmF1 1506787 - 1510209 + | hypothetical protein TERM 1683 1510991 - 1510973 - f 74 -6.6 -4.371 | opp_overlap 1510984, overlap 1510967 1510984 1510986 TCGATCAGACCAAAA CGCTGGCA AAA TACCTGCG CAACCAGCCGCAGGG TERM 1684 1511112 - 1511086 - f 79 -11.4 -2.54523 | TTAGATGTGAACGGA CGGACCCGGCTG GTA CCGCCGCGCCCG GAATATCGCGTACAA YP_1373 1511844 - 1512929 + | hypothetical protein TERM 1685 1513270 - 1513286 + G 71 -6.5 -4.254 | overlap 1513281 ACAAGCATTTATGCT CACCAGA GCC TCTGGAG TTTGTTCAGTATTGA YP_1374 1512929 - 1513399 + | hypothetical protein TERM 1686 1514325 - 1514302 - gf 83 -11.8 -2.82516 | gap 1, opp_overlap 1514300 1514295 1514304, overlap 1514304 TCGGGGAGCAGGATA CACTGT-GGCC GAA GGCCGACAGTG CGTTCAGTGGTTATC YP_1375 1513620 - 1515383 + | hypothetical protein YP_1376 1515347 - 1516432 + | hypothetical protein YP_1377 1516407 - 1516988 + | hypothetical protein YP_1378 1516988 - 1517440 + | hypothetical protein TERM 1687 1517571 - 1517555 - g 71 -5 -4.56702 | opp_overlap 1517561 1517564, overlap 1517557 GGTGAATTAAATAAA CTGGCC CACCC GGCCCG CCCGGATGTTGATTG TERM 1688 1518104 - 1518119 + G 79 -9 -4.19817 | AGCGAACCGGCCCCG CCACCT GTTC AGGTGG TTTTACCTGCCTCAC YP_1379 1517465 - 1518832 + | hypothetical protein TERM 1689 1518985 - 1518936 - T 81 -10.8 -3.27923 | gap 1, opp_overlap 1518941, overlap 1518940 1518945 TTTGAATATTATTAA TTAATGATAGCGCTCACAGCGGG GTGAT CCTGCTG-GAGCGCGACCTTTAA ACTGTATTAACACCA TERM 1690 1518941 - 1518980 + T 90 -11.4 -3.66883 | gap 1, opp_overlap 1518940 1518936 1518945 ATATTATTAATTAAT GATAGCGCTCACAGCGGGG TGA TCCTGCTG-GAGCGCGACC TTTAAACTGTATTAA TERM 1691 1518976 - 1518945 - T 93 -12.3 -2.97613 | gap 1, opp_overlap 1518941, overlap 1518940 1518936 TATTAATTAATGATA GCGCTCACAGCGGG GTGAT CCTGCTG-GAGCGC GACCTTTAAACTGTA YP_1380 1519667 - 1519044 - | hypothetical protein TERM 1692 1519479 - 1519464 - G 76 -3.2 -5.18371 | TTCGACAAAATAAAA CTCAGC TGTT GTTGAG GCGTTATAGCGTTCT TERM 1693 1519547 - 1519557 + g 82 -4 -5.28166 | overlap 1519534 TATGTTGGGTCTCAG CATT TAT AATG TTTTTGTTGATTTTC TERM 1694 1520145 - 1520171 + H 73 -3.6 -5.02502 | TATATAGGTAAAACG TCGTGTCTGCGA GCT TTGATGGCACGA TTTTTCTGTCATGTC uup3 1520182 - 1521945 + | ABC transporter ATP-binding protein TERM 1695 1521971 - 1521989 + F 100 -11 -5.80248 | opp_overlap 1521971 GACCTAACAAAAAAA GCTGATGC TAT GCGTCAGC TTTTTTTATGTCTTC TERM 1696 1521989 - 1521971 - f 100 -8.8 -5.8187 | opp_overlap 1521971 GACCTAACAAAAAAA GCTGATGC TAT GCGTCAGC TTTTTTTATGTCTTC YP_1382 1522173 - 1522817 + | hypothetical protein TERM 1697 1522865 - 1522844 - T 84 -10.1 -3.74693 | TGCCACCGTATTAAA GGTGATCGC TCAG GCGGTCACC GAACTCGATAATAAA YP_1383 1524047 - 1522839 - | transposase for the IS285 insertion element moeB 1525014 - 1524214 - | molybdopterin biosynthesis protein MoeB moeA 1526260 - 1524986 - | molybdopterin biosynthesis protein MoeA TERM 1698 1526414 - 1526439 + r 100 -11.3 -4.34345 | AAAAATGAGATGGCT TGATACTGCTT TTAC GAGCAGTATCA TTTTCATCGTATATA TERM 1699 1526635 - 1526647 + r 74 -6.3 -4.56775 | CTTCAATATAACTTT CATTG CAA CAATG TTTTTACCAACACAT TERM 1700 1526800 - 1526771 - R 72 -9.3 -3.11687 | opp_overlap 1526769 TGAATCATGAGGCAA CGTTGACGCCATA ATGA TGTGGCTTCAACG AATATCTGCCAGATA aslB1 1528105 - 1526795 - | putative heme-binding protein phnL3 1528783 - 1528115 - | ABC transporter ATP-binding protein acrA6 1530047 - 1528785 - | hypothetical protein YP_1389 1532409 - 1530049 - | hypothetical protein TERM 1701 1530749 - 1530763 + g 78 -5.8 -4.76041 | opp_overlap 1530749 TTTGTCGCTATAGCA TGATAA GTA TTATCA TTTTTACTGGGTGTA TERM 1702 1531028 - 1531047 + g 76 -5.8 -4.72272 | AATTCATCGCTTAGT GGAAATGT CACG ACATTTTC TTTTTCATAACCAAA TERM 1703 1531436 - 1531426 - G 73 -5.4 -4.72272 | TGTTGCGATGAAAAA TGAC TCT GTCA GTAATTGATAATTAG TERM 1704 1532139 - 1532149 + g 100 -5.4 -5.81622 | GTAAAGCGTAGGCGA CATC TTT GATG TTTTTTTCATTTTGT YP_1390 1532705 - 1532493 - | hypothetical protein TERM 1705 1532922 - 1532909 - R 95 -8.1 -5.10461 | opp_overlap 1532905 TCTATCGAATAAAAA GCCCT CGAA AGGGC TTGGGGTTTTATGTG YP_1391 1533804 - 1532962 - | putative esterase TERM 1706 1533765 - 1533719 - G 75 -10.9 -3.47345 | gap 1, opp_overlap 1533723, overlap 1533720 1533723 AAGGTCATATGACAA TTCAGGCTGCTGGCAGCATGGC GGTA GCGCTGTTGCCAGCAGCC-AAA CATCCGATGCTCTTC TERM 1707 1533765 - 1533720 - G 76 -12.5 -2.67925 | opp_overlap 1533723, overlap 1533719 1533723 AGGTCATATGACAAT TCAGGCTGCTGGCAGCATGGC GGTA GCGCTGTTGCCAGCAGCCAAA CATCCGATGCTCTTC TERM 1708 1533762 - 1533723 - G 91 -16.4 -2.6252 | opp_overlap 1533723, overlap 1533719 1533720 TCATATGACAATTCA GGCTGCTGGCAGCATGGC GGTA GCGCTGTTGCCAGCAGCC AAACATCCGATGCTC adhC 1534964 - 1533825 - | alcohol dehydrogenase TERM 1709 1534851 - 1534841 - G 72 -8.2 -3.87815 | overlap 1534825 CGTCAGTGTGACAAA CGCC ACT GGCG ACAATCCGCACTAAC lysR7 1536107 - 1535238 - | LysR family transcriptional regulator TERM 1710 1536618 - 1536658 + G 79 -11.7 -3.19824 | overlap 1536612 1536617 1536617 1536619 GCACATTTTGGCCGT CCGGCGCTCAGTGCGGC CGTATTT GCCGGGCCGGGTGCCGG TATATTCATTAGTGG proP13 1536243 - 1537394 + | hypothetical protein TERM 1711 1537516 - 1537488 - f 93 -13.3 -2.84 | opp_overlap 1537511, overlap 1537485 ATCACTGGATAATCA TTTCGCTCTCAAT TAG AGTGAGAGCGAAA TTCGGGTGTGACCCG folE 1537524 - 1538240 + | GTP cyclohydrolase I TERM 1712 1538695 - 1538709 + G 70 -10 -3.30418 | overlap 1538693 1538692 CAGCCAGCTTATTAC GTACCG GCG CGGTAC TCTATTTGATCGGTG TERM 1713 1539073 - 1539085 + G 80 -4.7 -5.14965 | overlap 1539074 ATGTCGGTTGGGATT ACCGC TGG GCGGG TTTTTTGCTACAAGT TERM 1714 1539074 - 1539084 + G 70 -8.2 -3.68256 | overlap 1539073 TGTCGGTTGGGATTA CCGC TGG GCGG GTTTTTTGCTACAAG YP_1396 1538295 - 1539461 + | hypothetical protein TERM 1715 1541165 - 1541143 - g 76 -3.4 -5.14698 | opp_overlap 1541144, overlap 1541144 AAATTGAAAACAAAA TCGTACGTAT TCC ATACGTAGGT GTTGATAAAGATAAT mglB 1540098 - 1541201 + | galactose-binding protein TERM 1716 1541692 - 1541672 - g 74 -6.9 -4.30448 | overlap 1541665 AAATTGAATTTAAAA GTTCTAAAG AAG CATTAGAAC AGGGTGTTTCGATGG TERM 1717 1541754 - 1541783 + G 86 -2.8 -5.64274 | opp_overlap 1541751 1541754 1541756, overlap 1541756 TACAGTAATGGACAA CATGTGGTTGGG GCGCTA TCCAACCAAAGG TTTTTTTGTCGATCA mglA4 1541431 - 1542951 + | galactose/methyl galaxtoside transporter ATP-binding protein mglC 1542972 - 1543982 + | beta-methylgalactoside transporter inner membrane component TERM 1718 1544164 - 1544138 - T 100 -13.1 -4.68846 | gap 1, opp_overlap 1544133 AGGAATAAAGTAAAA GCCAGTCAGGGC GATA GCCCT-ACTGGC TGAAGTTAATGACAA sanA 1545164 - 1544427 - | hypothetical protein TERM 1719 1544574 - 1544562 - G 71 -6.9 -4.26871 | CAATGGACCAAGAAA GCGAG GTT CCCGC TTAAGAATATAGAGG TERM 1720 1545330 - 1545341 + r 71 -3 -5.06816 | CGCATGTGCTTTGGG GTTA CAAG TAAC TTTTTGTTCAACGCT TERM 1721 1545411 - 1545438 + r 73 -8.3 -3.65812 | overlap 1545412 GATAGCATCTGAGTA CCCGGCCTGCG GTATAG CACAGGCCGGA TTATATTCAAAACGA TERM 1722 1545412 - 1545437 + r 83 -11.8 -2.79273 | overlap 1545411 ATAGCATCTGAGTAC CCGGCCTGCG GTATAG CACAGGCCGG ATTATATTCAAAACG sfcA1 1547142 - 1545445 - | malate dehydrogenase TERM 1723 1546051 - 1546067 + g 78 -2.2 -5.25803 | ATTGTGCAGATTCCA GTGGTG TAGGT CGTCAC TTTTTTGTACCAATT cdd 1548382 - 1547498 - | cytidine deaminase TERM 1724 1548697 - 1548673 - R 71 -9.3 -2.98729 | overlap 1548653 GATAAGGATTACAGA CCCTGACGT CGCTATC ACGCCAGGG GAAAGTGGGTTCAAC lrgB 1549403 - 1548708 - | hypothetical protein TERM 1725 1548966 - 1548950 - G 82 -7.3 -4.62904 | AAATACCGGCAAAAA TAACGCA AAC TGCGCTA ATAGCGGGTAAACCA YP_1404 1549846 - 1549400 - | hypothetical protein TERM 1726 1549785 - 1549767 - G 70 -8.8 -3.6512 | TAAATAATGGTGAAA GCTCGCAG GTA CTGCCAGC AAAGTGACATCATAT ydeF 1551230 - 1550049 - | putative multidrug resistance protein TERM 1727 1550308 - 1550297 - G 73 -5.8 -4.5442 | CGCCCAATGAGAAAA TGGC CATT GCCA GCATCCATAACGGAA TERM 1728 1551207 - 1551233 + g 74 -2.2 -5.16681 | opp_overlap 1551186, overlap 1551212 AATCAGCAGATTGGT TACGCGCGATGA GAA TCTTTGCATGTA TTTTCTTATTTTTAG TERM 1729 1551386 - 1551413 + r 93 -9.8 -4.39226 | opp_overlap 1551388, overlap 1551383 1551388 GAAAATTTTTGCAGG AAGCAGTTCGGC CAGA GCCGATCTGCTA TTATTTTCTAGTTAT TERM 1730 1551388 - 1551411 + r 100 -12.4 -3.78091 | opp_overlap 1551388, overlap 1551386 1551383 AAATTTTTGCAGGAA GCAGTTCGGC CAGA GCCGATCTGC TATTATTTTCTAGTT TERM 1731 1551411 - 1551388 - R 93 -12.4 -3.1506 | opp_overlap 1551388 1551386 1551383 AAATTTTTGCAGGAA GCAGTTCGGC CAGA GCCGATCTGC TATTATTTTCTAGTT YP_1406 1552800 - 1551544 - | hypothetical protein TERM 1732 1552604 - 1552618 + g 90 -9.2 -4.63184 | opp_overlap 1552604 GGCGCAGCGATGAAA CCTGCG GGA CGCGGG TTTTTGGCATCCCTT TERM 1733 1552763 - 1552743 - G 74 -11.1 -3.15544 | opp_overlap 1552744 1552746, overlap 1552746 GGTCACTGTGACCAA TCAGCCGCA TAT TGCGGCTGT ATTCAGGTATCGGCA TERM 1734 1552744 - 1552762 + g 86 -14.6 -3.07962 | opp_overlap 1552743 1552746, overlap 1552746 GTCACTGTGACCAAT CAGCCGCA TAT TGCGGCTG TATTCAGGTATCGGC TERM 1735 1552746 - 1552760 + g 74 -11.4 -3.09785 | opp_overlap 1552743 1552746, overlap 1552744 CACTGTGACCAATCA GCCGCA TAT TGCGGC TGTATTCAGGTATCG TERM 1736 1552760 - 1552746 - G 71 -11.4 -2.78216 | opp_overlap 1552746 1552744, overlap 1552743 CACTGTGACCAATCA GCCGCA TAT TGCGGC TGTATTCAGGTATCG rbsB5 1553906 - 1552815 - | putative sugar ABC transporter TERM 1737 1554523 - 1554533 + H 86 -3.2 -5.61689 | GCCTATTTTTATATA TCGC GCA GTGA TTTTTTATTAATTTT TERM 1738 1554958 - 1554972 + G 72 -3.6 -4.84274 | GTGTGGTTTGATCTA GATGAT GCG ATTATC TTTTTGATGTCGTTA YP_1408 1554724 - 1555251 + | hypothetical protein TERM 1739 1555287 - 1555323 + F 71 -8.8 -3.28712 | gap 1, opp_overlap 1555292, overlap 1555292 ACGGGTTTCAATCAT AAAAATGCCGGT-AGGG TTAC CCCAGACCGGCATTTTG TTGTGCCCAGAAAAC TERM 1740 1555292 - 1555318 + G 91 -8.7 -4.77165 | gap 1, opp_overlap 1555292, overlap 1555287 TTTCAATCATAAAAA TGCCGGT-AGGG TTAC CCCAGACCGGCA TTTTGTTGTGCCCAG TERM 1741 1555318 - 1555292 - g 93 -8.7 -4.98255 | gap 1, opp_overlap 1555292 1555287 TTTCAATCATAAAAA TGCCGGT-AGGG TTAC CCCAGACCGGCA TTTTGTTGTGCCCAG TERM 1742 1555356 - 1555338 - g 100 -16 -4.36914 | opp_overlap 1555338 GTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC TERM 1743 1555338 - 1555356 + G 93 -16 -3.07307 | opp_overlap 1555338 GTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC YP_1409 1555291 - 1555479 + | hypothetical protein tnp_18 1555469 - 1555927 + | transposase for the IS1541 insertion element TERM 1744 1556001 - 1556033 + T 100 -11.3 -4.43208 | opp_overlap 1556008, overlap 1556005 1556007 1556008 CCTTATAGGCGCATA TGAAAAACCTCCGGC TAT GCCGGAGGATATTTA TTTCTTTAAGGATCT TERM 1745 1556005 - 1556029 + T 100 -9.9 -4.78326 | opp_overlap 1556008, overlap 1556001 1556007 1556008 ATAGGCGCATATGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTTCTTTAAGG TERM 1746 1556007 - 1556027 + T 100 -12.5 -3.99693 | opp_overlap 1556008, overlap 1556005 1556001 1556008 AGGCGCATATGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTTCTTTAA TERM 1747 1556026 - 1556008 - T 100 -16 -4.8048 | opp_overlap 1556007 1556005 1556001 1556008 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTCTTTA TERM 1748 1556008 - 1556026 + T 100 -16 -2.98189 | opp_overlap 1556008, overlap 1556007 1556005 1556001 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTCTTTA metG 1558118 - 1556091 - | methionyl-tRNA synthetase mrp 1558383 - 1559495 + | putative ATPase TERM 1749 1559567 - 1559529 - f 86 -11.8 -3.07344 | opp_overlap 1559543 TGAGCGCGTAACACA CTGAGCCGGAAAGGTCAT TCA ATGATGCTTCCGGCTCAA GATCGGCTTAAATAG TERM 1750 1560072 - 1560056 - g 74 -2.2 -5.0666 | overlap 1560057 CACGTAAAAAAGAAA CGGTTC ATTTA GAACCT AAAAAAGTGATCATT udk 1559740 - 1560381 + | uridine kinase dcd 1560486 - 1561067 + | deoxycytidine triphosphate deaminase TERM 1751 1561182 - 1561209 + F 71 -4.8 -4.63592 | CGCTTTCCCTTCATT TGACTTGGTCAG CAGT CTGGACTAGTCA TTCTTTTTATTGAGA TERM 1752 1561393 - 1561379 - g 76 -4.2 -4.99638 | overlap 1561381 ACAGGTAGAGAAAAA GAGTGG TTA CCACTT GCAGTTGGAGGGTGA TERM 1753 1563082 - 1563068 - g 72 -3.5 -4.79174 | ACGTAACCAACAAAA TCGCC GTGTG GACGA TCTGAAAAAGTCACT asmA1 1561356 - 1563110 + | putative assembly protein TERM 1754 1563200 - 1563165 - T 82 -10.5 -3.61922 | gap 1, opp_overlap 1563166 1563167 1563169, overlap 1563167 1563169 AATAGGTAGTGGAAA GAGATAGGCCCGATGG TTTCT CCACCGGGCCTAA-TC ATTTATTTTTCCAGG TERM 1755 1563166 - 1563201 + T 100 -8.3 -4.85782 | gap 1, opp_overlap 1563165 1563167 1563169, overlap 1563167 1563169 ATAGGTAGTGGAAAG AGA-TAGGCCCGATGG TTTCT CCACCGGGCCTAATCA TTTATTTTTCCAGGC TERM 1756 1563200 - 1563167 - T 100 -14 -3.38522 | gap 1, opp_overlap 1563167 1563166 1563169, overlap 1563165 1563169 TAGGTAGTGGAAAGA GA-TAGGCCCGATGG TTTCT CCACCGGGCCTAATC ATTTATTTTTCCAGG TERM 1757 1563167 - 1563200 + T 91 -11.8 -3.50746 | gap 1, opp_overlap 1563165 1563167 1563169, overlap 1563166 1563169 TAGGTAGTGGAAAGA GA-TAGGCCCGATGG TTTCT CCACCGGGCCTAATC ATTTATTTTTCCAGG TERM 1758 1563197 - 1563169 - T 100 -16.8 -3.26031 | opp_overlap 1563169 1563167 1563166, overlap 1563165 1563167 GGTAGTGGAAAGAGA TAGGCCCGATGG TTTCT CCACCGGGCCTA ATCATTTATTTTTCC TERM 1759 1563169 - 1563197 + T 100 -14.6 -2.57916 | opp_overlap 1563165 1563167 1563169, overlap 1563167 1563166 GGTAGTGGAAAGAGA TAGGCCCGATGG TTTCT CCACCGGGCCTA ATCATTTATTTTTCC YP_1416 1564841 - 1563255 - | hypothetical protein TERM 1760 1564933 - 1564911 - H 72 -7.1 -3.91716 | gap 1 CCATTTGTTAAAGAA GTGCATCGAC CAGA GTCGAT-CAC AAAAAAATCAATCCA ysuF 1565283 - 1566062 + | ferric iron reductase involved in ferric hydroximate transport TERM 1761 1566063 - 1566091 + F 72 -7.5 -3.9751 | opp_overlap 1566067 AATCTTATTAGTTAG CCAAGTTCCTG CATTAGA CAGAAACTTGG TTGTATTCTTTATTT TERM 1762 1566698 - 1566677 - g 74 -6.5 -4.37886 | overlap 1566679 GGACCCGCGATAAAA TGGCCCTAG GTAG CCAGGGCGA CGGTATTTTCACCAG TERM 1763 1567399 - 1567418 + G 74 -7.9 -4.14874 | CTACGGATTATGGGA GCCAAAC AGCTTG GTTTGGC TTTTGAACATGTTAT ysuJ 1566214 - 1567761 + | putative decarboxylase TERM 1764 1569063 - 1569046 - g 70 -2.7 -4.87665 | opp_overlap 1569048, overlap 1569048 1569062 TCCGATTGAGAAAAA CATTGCT TTTC AGCAATT CAGTGCGCCATCACT alcA 1567796 - 1569094 + | putative siderophore biosynthetic enzyme alcB 1569127 - 1569672 + | putative siderophore biosynthetic enzyme TERM 1765 1571430 - 1571417 - gT 74 -8.1 -3.96469 | opp_overlap 1571416 1571417 ACAGCTCAACAATAA CCAGC ACAT GCTGG ATTTAGCTGACCCTG ysuG 1569624 - 1571513 + | putative siderophore biosynthetic enzyme ysuD 1572470 - 1571622 - | putative iron-siderophore transport system, ATP-binding component ysuC 1573507 - 1572467 - | putative iron-siderophore transport system, membrane permease component ysuB 1574534 - 1573494 - | putative iron-siderophore transport system, transmembrane component TERM 1766 1573770 - 1573732 - G 70 -2.9 -4.75472 | gap 1, overlap 1573733 1573734 1573736 GCCAGACCAATAAAA GC-GACCGGACCCGCTAC TGCC GTCGCGGTAGCGGCCAGC AATGTTGCGCCTACT TERM 1767 1574074 - 1574062 - G 75 -9.1 -3.84246 | opp_overlap 1574060 1574062 CCGGTAAGCACCAAA CGCAC CGA GTGCG TATTCCGTTGCCCGC ysuA 1575649 - 1574531 - | putative iron-siderophore transport system, periplasmic binding protein TERM 1768 1575677 - 1575656 - R 71 -8.7 -3.39908 | overlap 1575654 CGTTGGCAAAAGATA CAGCCGG AAAAGTGG CCGGCTG TGAGGGTATCCAACT ysuR 1577961 - 1575700 - | putative iron-siderophore receptor TERM 1769 1577002 - 1577035 + g 80 -13.9 -3.00946 | overlap 1576999 1577015 TCGGGTTTCGGCGGA TGCCCAATCCGATGC GGTG GTGGCGGATTGGGCA TAATTTGTCCGCCCA TERM 1770 1577164 - 1577176 + g 73 -3.3 -5.01811 | opp_overlap 1577165, overlap 1577165 1577167 ATCTATCTCCAAGAT ACCGT AAA ACGGG TTTTTACTTTGATCA TERM 1771 1577924 - 1577941 + g 89 -2.5 -5.70829 | opp_overlap 1577925, overlap 1577925 1577927 GTGCAGTTAAAACGC ACTCGGC TTTT GCCGTGA TTTTTTTCTAGTATT YP_1427 1579988 - 1578174 - | putative siderophore biosynthetic enzyme TERM 1772 1579515 - 1579502 - G 74 -4.5 -4.83615 | gap 1 TATTCGCGATAAAAA CG-GGG TGG CCCTCG CTCATCGCTGTTTCT TERM 1773 1581627 - 1581616 - g 71 -5.8 -4.36914 | overlap 1581618 CGTTGCTTGAGAAAA CACC ACGT GGTG CGGGGGATGAAATTC galU1 1580934 - 1581824 + | UTP-glucose-1-phosphate uridylyltransferase galF 1581908 - 1582801 + | UTP-glucose-1-phosphate uridylyltransferase TERM 1774 1582880 - 1582895 + F 89 -10.4 -4.01603 | overlap 1582875 1582892 TTGGCAGTTTAGGCC GCGCCA TTTG TGGCGC TTTGCTCTTTGCCTA gnd 1583136 - 1584596 + | 6-phosphogluconate dehydrogenase TERM 1775 1584767 - 1584743 - T 100 -8.6 -5.06414 | opp_overlap 1584743 GCTGCCCAATAAAAA CGCCTCCA GTGATAAGT TGGAGGCG TTTTTTTGCCAGTGA TERM 1776 1584743 - 1584767 + T 100 -10 -5.42259 | opp_overlap 1584743 GCTGCCCAATAAAAA CGCCTCCAGT GATAA GTTGGAGGCG TTTTTTTGCCAGTGA hisI 1585410 - 1584796 - | bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein hisF 1586180 - 1585404 - | imidazole glycerol phosphate synthase subunit HisF TERM 1777 1585709 - 1585721 + g 73 -9.1 -3.77206 | CCCAATCTTCGGTTT GCCAC GTG GTGGC TTTGGTACGCTTCTC hisA 1586899 - 1586162 - | 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase TERM 1778 1586714 - 1586734 + g 73 -9 -3.65902 | opp_overlap 1586699 CTCGCGCAGTAGTGG GATCTGGC GAGCG GCCGGATC TTTGGCTCCGGTCAG hisH 1587495 - 1586905 - | imidazole glycerol phosphate synthase subunit HisH hisB1 1588562 - 1587495 - | imidazole glycerol-phosphate dehydratase/histidinol phosphatase hisC 1589707 - 1588559 - | histidinol-phosphate aminotransferase hisD 1591041 - 1589710 - | histidinol dehydrogenase TERM 1779 1590964 - 1590978 + g 70 -2.1 -4.93316 | gap 1, overlap 1590973 TGCATTGATGGCTGG GCGGCT CAAC AGC-GC TTTTTGCTGTTCTTC hisG 1591944 - 1591045 - | ATP phosphoribosyltransferase TERM 1780 1591081 - 1591099 + g 73 -10.2 -3.33711 | opp_overlap 1591074 1591080 1591077 1591081 CGGTAATACCAGAAT GGAGCTGG CAC CCAGCGCC TTCAATTTCTCCATG TERM 1781 1592118 - 1592167 + G 72 -10.1 -3.48395 | gap 1, opp_overlap 1592130, overlap 1592130 GTCTATAAAATGATG AGCAATAAAAAAGCCCTCGGAAGA TTA TCTTCCGAGGGCTCTCT-ACTGCG TTCTCTACGCCACCT TERM 1782 1592130 - 1592156 + G 100 -21 -2.96538 | opp_overlap 1592130, overlap 1592118 ATGAGCAATAAAAAA GCCCTCGGAAGA TTA TCTTCCGAGGGC TCTCTACTGCGTTCT TERM 1783 1592156 - 1592130 - g 100 -21 -5.52023 | opp_overlap 1592130 1592118 ATGAGCAATAAAAAA GCCCTCGGAAGA TTA TCTTCCGAGGGC TCTCTACTGCGTTCT YP_1439 1592034 - 1592258 + | hypothetical protein wcaG4 1592650 - 1593477 + | hypothetical protein YP_1441 1594066 - 1593632 - | hypothetical protein araH6 1595306 - 1594311 - | ribose transport system, permease protein gldA 1597129 - 1598220 + | hypothetical protein TERM 1784 1598330 - 1598355 + F 100 -7.6 -6.15259 | opp_overlap 1598330 1598333 ATACGCCGAATGAAA TAGCCGACGT TTAAAC GCGTCGGTTA TTTTTTTTTGCATTC TERM 1785 1598517 - 1598532 + F 74 -10.4 -2.57132 | overlap 1598516 GTGCCCACCGGTATG CGCTGC ACAT GCAGCG ATTATGGCGCAGCAG potE2 1598680 - 1600071 + | amino acid permease TERM 1786 1600104 - 1600127 + T 100 -11.8 -5.47159 | gap 1, opp_overlap 1600104 CATTAAGTTTATCAA TCCGGC-ACAG TCT CTGTTGCCGGA TTTTTTGTATTCAGA TERM 1787 1600127 - 1600104 - T 86 -11.8 -3.19157 | gap 1, opp_overlap 1600104 CATTAAGTTTATCAA TCCGGC-ACAG TCT CTGTTGCCGGA TTTTTTGTATTCAGA sbcB 1602118 - 1600688 - | exonuclease I wcaG5 1602381 - 1603520 + | hypothetical protein YP_1448 1603954 - 1604271 + | hypothetical protein TERM 1788 1604328 - 1604350 + T 100 -11.3 -5.16841 | opp_overlap 1604326 AGGGGAAAGAGAGTG GGGCTGGCA TCTAT TGTCAGCCC TTTTTATTGGTGTGC TERM 1789 1606497 - 1606510 + T 71 -6.7 -4.21773 | TTGTGCTGTGGCATT TGCCA CTAA TGGCA TTGTTTGTCTTGCCG TERM 1790 1608190 - 1608173 - T 76 -2.7 -5.38054 | opp_overlap 1608187, overlap 1608187 TTTTATAAATAAAAA TGACATT TTAA AAAGTCA ATCTGACATTATTCT TERM 1791 1608197 - 1608187 - T 73 -5.4 -4.65168 | opp_overlap 1608187, overlap 1608173 ATGACATTTTAAAAA GTCA ATC TGAC ATTATTCTGAAAACA YP_1450 1608509 - 1608315 - | hypothetical protein TERM 1792 1609256 - 1609267 + G 70 -2.2 -4.92314 | CCCGCCGTGGGGTTA GGTA TTTT TGCC TTTTTCTACCTTGAT proP14 1608575 - 1609975 + | putative transmembrane transporter YP_1452 1610472 - 1609984 - | hypothetical protein ucpA 1610834 - 1611574 + | putative oxidoreductase mhpD2 1611622 - 1612464 + | putative hydrolase dgoA1 1612496 - 1613773 + | O-succinylbenzoate synthase and related enzyme YP_1456 1613852 - 1614025 + | hypothetical protein TERM 1793 1614274 - 1614286 + G 70 -9.1 -3.50853 | CTTTTCGGCGAGACG CAGGC AAT GCCTG TTGTCCTTGGGCCAG lldD 1614070 - 1615215 + | L-lactate dehydrogenase TERM 1794 1615341 - 1615312 - T 83 -10.7 -3.4678 | overlap 1615313 ACTGTGACACGAGAA GGGTTAAGGGGGG GAAG CTCCCCTTAACCG CTTGGGGTCGCGCAG TERM 1795 1615340 - 1615313 - T 95 -14.2 -2.67747 | overlap 1615312 CTGTGACACGAGAAG GGTTAAGGGGGG GAAG CTCCCCTTAACC GCTTGGGGTCGCGCA argG 1616790 - 1615420 - | argininosuccinate synthase TERM 1796 1617317 - 1617328 + G 85 -3.6 -5.47821 | CGACAGTTTCAATAT GCTG ATTG CGGC TTTTTTTGCCTCCGT norM1 1617081 - 1618511 + | hypothetical protein proP15 1619918 - 1618539 - | putative sugar transporter TERM 1797 1619829 - 1619860 + g 86 -3 -5.65177 | gap 1, overlap 1619832 1619833 GACATCTTTGATTGT TAATTGCTG-CGGCT GCC AGCCATCAGCAGATA TTTTTTTATAGATGT cDA11 1620832 - 1619915 - | putative polysaccharide deacetylase TERM 1798 1620564 - 1620574 + g 76 -8.2 -4.21141 | ACTTCGTGTCCAGCC GCGG CTA CCGC TTTCATTTGTTCAGG YP_1462 1621373 - 1622068 + | hypothetical protein TERM 1799 1622267 - 1622248 - g 90 -8.6 -5.06103 | AGAACGGCTAAAAAA TCACGAGC TCAG ACTCGTGA GGCAAGAGAGGCTGT TERM 1800 1622311 - 1622299 - g 91 -3.3 -5.83211 | GAGGAAAATAAAAAA GCACA ACT TGAGC GTGATAAACAGCTAA YP_1463 1622158 - 1622697 + | hypothetical protein TERM 1801 1622764 - 1622800 + T 79 -6.8 -4.66537 | gap 1, opp_overlap 1622771 1622777 1622778, overlap 1622767 AATCTTTACAAATAC TCATAGATGAAAAGTCC CTCA GGGCTTTTCAT-TAAGA TTTTATGTTCAGCCA TERM 1802 1623032 - 1623009 - T 100 -11 -4.81851 | opp_overlap 1623009 ACTGAAATGCAAAAA CCCTGCTTAG TTAC CTAGGCAGGG TTCTTTAATTTGGCT TERM 1803 1623009 - 1623032 + T 100 -13.2 -4.15998 | opp_overlap 1623009 ACTGAAATGCAAAAA CCCTGCTTAG TTAC CTAGGCAGGG TTCTTTAATTTGGCT TERM 1804 1623510 - 1623453 - T 82 -10.2 -3.68988 | gap 3, opp_overlap 1623455 1623456 1623468, overlap 1623454 1623468 GGCGAGGTAACAGAA TCCTCAGCGCCTAAATACCGTCTTGCCAA CTA TCGGCAAG-CGGTATTTAGGC-C-GCAAA TGGTTTGCCCGACTT TERM 1805 1623512 - 1623454 - T 100 -16.3 -2.81072 | opp_overlap 1623455 1623456 1623468, overlap 1623453 1623468 GCGAGGTAACAGAAT CCTCAGC-GCCTAAATACCGTCTTGCCAA CTA TCGGCAAG-CGGTATTTAGGCCGCAAATG GTTTGCCCGACTTCA TERM 1806 1623456 - 1623510 + T 95 -13.1 -2.90992 | opp_overlap 1623453 1623454 1623468, overlap 1623455 1623468 GAGGTAACAGAATCC TCAGCG-CCTAAATACCGTCTTGCCAA CTA TCGGCAAG-CGGTATTTAGGCCGCAAA TGGTTTGCCCGACTT TERM 1807 1623468 - 1623497 + T 78 -10.1 -3.53224 | gap 1, opp_overlap 1623453 1623454 1623468, overlap 1623456 1623455 TCCTCAGCGCCTAAA TACCGTCTTGCCAA CTA TCGGCAAG-CGGTA TTTAGGCCGCAAATG TERM 1808 1623497 - 1623468 - T 100 -12.3 -3.55444 | gap 1, opp_overlap 1623468 1623456 1623455, overlap 1623453 1623454 TCCTCAGCGCCTAAA TACCGTCTTGCCAA CTA TCGGCAAG-CGGTA TTTAGGCCGCAAATG uhpA1 1624193 - 1623564 - | GerR family transcriptional regulatory protein TERM 1809 1624489 - 1624473 - R 73 -8.7 -3.40558 | overlap 1624471 TATATATTCCAAACA TCCGTGG CAA CCACAGA GAGATTTCCGGAATA YP_1465 1625742 - 1624450 - | putative C4-dicarboxylate transporter, large subunit YP_1466 1626268 - 1625762 - | putative C4-dicarboxylate transporter, small subunit TERM 1810 1626101 - 1626089 - G 74 -7.7 -4.15044 | CGCTGCGCCAATAAA GGTGA ACG TCACC ATACATAAAATAGCG TERM 1811 1626381 - 1626355 - R 75 -10.3 -2.73875 | overlap 1626352 CGTTGGGTAATATCA GCGGTATTAAA AATAA TTCAATACCGC CGGATGGATGTTATT dctP 1627384 - 1626392 - | putative C4-dicarboxylate transporter, periplasmic protein ybtD 1627907 - 1628647 + | putative phosphopantetheinyl transferase TERM 1812 1629028 - 1629009 - T 95 -12.8 -2.94322 | opp_overlap 1629005, overlap 1629006 ATTGGACGCAAAGTA GGCCGCCA TAAA CGGCGGCC TGAGGTTAATTTACG galA 1631214 - 1629034 - | alpha-galactosidase lacY 1632545 - 1631238 - | galactoside permease TERM 1813 1632837 - 1632853 + G 76 -5.9 -4.60487 | CATCACGTCCACGAG TGTTGAA TAA TTCGACA TTTTTGGAAATGATA TERM 1814 1633290 - 1633280 - g 70 -4.6 -4.59773 | GGGTATCTGCAAAAA GCGG ATC CCAC TCGTCCTGGCGGTTA purR3 1632593 - 1633642 + | transcriptional regulator TERM 1815 1633750 - 1633783 + T 71 -9.7 -2.66748 | opp_overlap 1633755, overlap 1633755 CAGTGATAGAAAAGC AAAAATCCCGCTTAG TTTC CTAAACGGGATTTTC TAAATTTGGCTCCTC TERM 1816 1633755 - 1633778 + T 95 -9.6 -4.51196 | opp_overlap 1633755, overlap 1633750 ATAGAAAAGCAAAAA TCCCGCTTAG TTTC CTAAACGGGA TTTTCTAAATTTGGC TERM 1817 1633778 - 1633755 - T 100 -11.8 -5.15526 | opp_overlap 1633755 1633750 ATAGAAAAGCAAAAA TCCCGCTTAG TTTC CTAAACGGGA TTTTCTAAATTTGGC YP_1472 1634855 - 1634043 - | hypothetical protein TERM 1818 1634804 - 1634825 + g 76 -5.8 -4.62772 | overlap 1634805 GTGCCTCATGCCATT GCGCAAGC ATCTCC GCTTGCGG TTTATTTGCTTTCCA TERM 1819 1635199 - 1635218 + r 76 -9.3 -3.49858 | opp_overlap 1635193, overlap 1635210 CTGAACTTATCAGCA GCCATGG CATTCA CCATGGC TTATGGTGTGCTTGA YP_1473 1635544 - 1635245 - | hypothetical protein TERM 1820 1635699 - 1635713 + r 75 -5.6 -4.71318 | GAGGAGCAGGGAAGG CCGCTG CTC CAGAGG TTGTTTTTTGATCTT rIO1 1636617 - 1635766 - | hypothetical protein mdlB4 1638438 - 1636720 - | putative ABC transporter ATP-binding protein YP_1476 1638870 - 1639067 + | hypothetical protein YP_1477 1639094 - 1639258 + | hypothetical protein araC2 1639726 - 1639340 - | AraC family transcription regulator TERM 1821 1639657 - 1639671 + g 70 -9.2 -3.56594 | opp_overlap 1639657, overlap 1639668 CTTCAAGATAGATGA CCCGCC CTA GGTGGG TTTCGACCCATTTAC TERM 1822 1639833 - 1639859 + H 71 -6.6 -4.14243 | opp_overlap 1639833 AATGTGCGGTAAAGA CTTTTTGGCCGA GGT TTGGCAAAAGAG TTTTCAAGTGCCATA TERM 1823 1639995 - 1640005 + H 87 -5.4 -5.42259 | TCTGATAGCGGTTGT TGGT GTA ACCA TTTTTTTAAAGATGC YP_1479 1640225 - 1640521 + | hypothetical protein YP_1480 1640845 - 1640612 - | hypothetical protein YP_1481 1641422 - 1641703 + | hypothetical protein TERM 1824 1641715 - 1641744 + F 95 -12.9 -3.10071 | opp_overlap 1641706 1641730, overlap 1641742 ATAAACGTGTCCCGA TGCTGGCACTACC AACA GGCAGTGTCAGCA TGTTACCTGCAATTT YP_1482 1641966 - 1642265 + | hypothetical protein YP_1483 1642308 - 1642619 + | hypothetical protein aroP2 1642732 - 1644243 + | aromatic amino acid transport protein TERM 1825 1644477 - 1644513 + T 89 -6.8 -5.28481 | opp_overlap 1644479, overlap 1644479 AATTCGCCCTCAACC AAGCATATAACCAT TTTAATATT ATGGTTATATGCTG TTTTTTAGTTAAATA TERM 1826 1644479 - 1644511 + T 88 -9.4 -4.26777 | opp_overlap 1644479, overlap 1644477 TTCGCCCTCAACCAA GCATATAACCAT TTTAATATT ATGGTTATATGC TGTTTTTTAGTTAAA TERM 1827 1644511 - 1644479 - T 74 -9.4 -3.33696 | opp_overlap 1644479 1644477 TTCGCCCTCAACCAA GCATATAACCAT TTTAATATT ATGGTTATATGC TGTTTTTTAGTTAAA crcA 1645147 - 1644548 - | palmitoyl transferase for Lipid A cspC2 1646308 - 1646517 + | cold shock-like protein CspC TERM 1828 1646529 - 1646560 + T 86 -11.7 -3.34398 | opp_overlap 1646518 1646537, overlap 1646537 CTAATCAGCGTTTGC TGTAAAAACCCGC CTTTGT GCGGGTTTTTTCA TATTTGGGGAAACCC TERM 1829 1646537 - 1646552 + T 91 -7.5 -5.32699 | opp_overlap 1646537, overlap 1646529 CGTTTGCTGTAAAAA CCCGC CTTTGT GCGGG TTTTTTCATATTTGG TERM 1830 1646552 - 1646537 - T 78 -7.5 -4.56597 | opp_overlap 1646529 1646537 CGTTTGCTGTAAAAA CCCGC CTTTGT GCGGG TTTTTTCATATTTGG YP_1487 1647381 - 1646608 - | hypothetical protein TERM 1831 1647734 - 1647748 + H 76 -7.8 -4.22858 | overlap 1647731 TAACGCCGCATCTGC CCGCTA TCT TGGCGG TTATTTATCTGTTAT rrmA 1647777 - 1648616 + | 23S rRNA methyltransferase A YP_1489 1649116 - 1648838 - | hypothetical protein TERM 1832 1649333 - 1649302 - R 100 -9.5 -4.98255 | overlap 1649304 GGCCAATCATAAAAA CATTGCAGGTGAC ATGATA GCCACCCGCAATA TACCTCAAGAGGTGA TERM 1833 1649331 - 1649304 - R 88 -9.9 -4.11322 | overlap 1649302 CCAATCATAAAAACA TTGCAGGTGAC ATGATA GCCACCCGCAA TATACCTCAAGAGGT atoS1 1651419 - 1649338 - | PAS/PAC domain-containing protein TERM 1834 1650246 - 1650264 + g 71 -6.6 -4.22214 | GGGCAGCTTCACTGG CGCGCAGG GCA TCTTCGCG TTGTTTTCGCTCACT TERM 1835 1651828 - 1651800 - R 71 -9 -3.28791 | opp_overlap 1651807, overlap 1651803 AGTCTCTCTCCATAA GTAC-GGAGCCGAA ACG TTCGGCTCCTGT-C AACGACGGATGAAAA TERM 1836 1651825 - 1651803 - R 83 -12 -2.82623 | opp_overlap 1651807, overlap 1651800 CTCTCTCCATAAGTA CGGAGCCGAA ACG TTCGGCTCCT GTCAACGACGGATGA TERM 1837 1651807 - 1651821 + r 71 -10 -2.62184 | opp_overlap 1651803 1651800 CTCCATAAGTACGGA GCCGAA ACG TTCGGC TCCTGTCAACGACGG dnaC_12 1652673 - 1651891 - | transposase/IS protein TERM 1838 1652589 - 1652603 + g 77 -11.4 -3.3506 | overlap 1652602 CTGCCTGTTGTGACA GCGCAG GCG CTGCGC TTATAAGGCTTTCCA YP_1492 1653692 - 1652670 - | transposase for insertion sequence IS100 TERM 1839 1653714 - 1653696 - H 100 -13.2 -4.01078 | AAAAGTGACCATAAA CTCTCCTG AAT CAGGAGAG CAGATTACCCCCTGG YP_1493 1653749 - 1653976 + | hypothetical protein YP_1494 1654170 - 1654355 + | hypothetical protein YP_1495 1654371 - 1654595 + | hypothetical protein YP_1496 1654946 - 1654605 - | ABC-type sugar transport systems, ATPase components malK1 1655722 - 1654832 - | putative binding-protein-dependent transport system, ATP-binding component malG2 1656574 - 1655747 - | putative binding-protein-dependent transport system, inner membrane component TERM 1840 1655955 - 1655938 - G 70 -8.5 -3.80174 | AGAGCGTTAGAACAA TCTGGAA TTCG TTCCAGA TAAAGAACAGTGTCA malF3 1657427 - 1656567 - | putative binding-protein-dependent transport system, inner membrane component TERM 1841 1657493 - 1657453 - R 70 -7.7 -3.6279 | gap 1, overlap 1657454 AAACCTGCGTAAGAA TTTCATTTCCGTCAGTGC GCAACT GCACTGACGGAAA-GCGA TTAACGGGACAACGC TERM 1842 1657494 - 1657454 - R 72 -9.9 -2.77192 | gap 1, overlap 1657453 AACCTGCGTAAGAAT TTCA-TTTCCGTCAGTGC GCAACT GCACTGACGGAAAGCGAT TAACGGGACAACGCT ugpB2 1658762 - 1657494 - | putative exported solute-binding protein mviM2 1659805 - 1658792 - | putative oxidoreductase TERM 1843 1660043 - 1660009 - g 95 -15.3 -3.88232 | gap 1, overlap 1660035 1660038 TCGTTTACAGAACAA TGATGGTGCTCTTGAG CAAA CTCAA-AGCACCATCA CGGTGCGTAAGGTTC YP_1502 1659944 - 1660159 + | hypothetical protein nagC3 1660213 - 1660503 + | transcriptional regulator phnF2 1661270 - 1660473 - | GntR family putative transcriptional regulatory protein YP_1505 1662239 - 1662673 + | hypothetical protein YP_1506 1662685 - 1663254 + | hypothetical protein TERM 1844 1663346 - 1663375 + T 86 -11.7 -3.31428 | gap 1, overlap 1663342 1663345 1663343 CAAACAGGTACTCAG TAGCTCTGATT-AG TAA CTCAATCAGAGCTA TCTATTGTATTTAAA TERM 1845 1663698 - 1663677 - T 84 -10.1 -3.74693 | CGCCACTGTATTAAA GGTGATCGC TCAG GCGGTCACC AAACTCGATAATAAA TERM 1846 1665461 - 1665475 + T 74 -10 -3.1211 | AACGATCTCATTTCT CCACTC TTT GAGTGG TTCGATAGTCTCATG TERM 1847 1665940 - 1665970 + T 76 -11.2 -2.72511 | overlap 1665939 CACTTTCCTTATATT GTTCCCGAATTCTT TGT AAGTATCCGGGAAC CTTTGGGGGGATGCA YP_1509 1666350 - 1666060 - | hypothetical protein YP_1510 1666603 - 1666331 - | hypothetical protein TERM 1848 1666883 - 1666899 + G 85 -7.2 -4.8048 | overlap 1666879 AATTGGTTAACCCTG CGCGCC GGGCG GGTGCG TTTTTGGTCTGCGCC YP_1511 1666634 - 1666993 + | hypothetical protein YP_1512 1666990 - 1667289 + | hypothetical protein YP_1513 1667306 - 1667593 + | hypothetical protein TERM 1849 1668067 - 1668082 + G 70 -3.3 -4.89233 | GTTAACAATGCTCAC TACTC CCCTTT GAGTA TTTTTGGTGTTGGTA YP_1514 1668028 - 1668243 + | hypothetical protein YP_1515 1668240 - 1668545 + | hypothetical protein YP_1516 1668550 - 1668804 + | hypothetical protein TERM 1850 1668826 - 1668858 + F 71 -10 -2.62614 | overlap 1668825 1668842 1668846 CACTTTCCTGTTAAT GGTAACCACTCTAT ATCGC GTAAAGTGGTTACC CGTTTTATAGTTTTC TERM 1851 1669434 - 1669424 - g 76 -4.6 -5.0133 | TACTGCCGTAAAAAA GGGC TTT ACCC CGCGCAGATAGCGCA YP_1518 1669193 - 1669639 + | hypothetical protein tnpA_2 1669711 - 1670670 + | transposase hcp4 1670890 - 1671234 + | hemolysin-coregulated protein (uncharacterized) YP_1521 1671260 - 1671484 + | hypothetical protein YP_1522 1672062 - 1671889 - | hypothetical protein TERM 1852 1672221 - 1672204 - R 75 -3.3 -5.12172 | TAGCAATAAATAAAA CGTAAGG CGTT CCCGACG GGTGGCTCAGTACAT YP_1523 1672453 - 1672307 - | hypothetical protein xerC2 1673097 - 1673675 + | integrase TERM 1853 1673926 - 1673913 - T 100 -9.5 -5.69473 | TAGATCACAAAAAAA CCGCC TCTC GGCGG TTAACGACATACTCG TERM 1854 1674013 - 1674033 + T 76 -10.5 -2.90714 | opp_overlap 1674012, overlap 1674016 CGCACAGCCATAAGC CGAGGGATT TTA AATCCCTTG TGTCTACCGATTTCA TERM 1855 1674016 - 1674030 + T 73 -8.6 -3.5947 | opp_overlap 1674012, overlap 1674013 ACAGCCATAAGCCGA GGGATT TTA AATCCC TTGTGTCTACCGATT TERM 1856 1674228 - 1674244 + T 76 -10.9 -2.62616 | TCGAACTCGCGACCC CGACCTT GGC AAGGTCG TGCTCTACCAACTGA pgsA2 1674963 - 1674415 - | phosphatidylglycerophosphate synthetase uvrC 1676875 - 1675022 - | excinuclease ABC subunit C uvrY 1677503 - 1676847 - | response regulator TERM 1857 1677305 - 1677292 - GH 71 -5.3 -4.57569 | opp_overlap 1677290 1677292, overlap 1677300 GTATCCGGCGAAAAA CGTAA AATT TTACG TGTTGCTTCCAACCC TERM 1858 1677763 - 1677753 - H 78 -4 -5.14477 | CATACATTCAAAAAA CTAA TTA TTAG CATTAGATAAGTTAA YP_1529 1678166 - 1678390 + | hypothetical protein glpM 1678515 - 1678859 + | hypothetical protein YP_1531 1679141 - 1678887 - | hypothetical protein YP_1532 1679260 - 1679442 + | hypothetical protein TERM 1859 1679455 - 1679429 - T 85 -5.9 -5.18357 | gap 1 CAACTGATGAAAAAA CAGCCGCA-CAG TGAA CTAATACGGCTG TTATTATTATATAGA YP_1533 1680032 - 1679481 - | attachment invasion locus protein TERM 1860 1682390 - 1682401 + G 70 -2.2 -5.00895 | opp_overlap 1682379 AATCCATCTACAAAA TGCC AGCC GGTA TTTTTATGTCATGGG TERM 1861 1682424 - 1682436 + G 76 -6.2 -4.73614 | GTCATGGGTTTGTAT GGCG TTTTT CGCC TTTGTTTTGGTACTG cycA 1681147 - 1682571 + | D-alanine/D-serine/glycine permease TERM 1862 1682583 - 1682617 + T 100 -17.4 -3.59738 | opp_overlap 1682588, overlap 1682588 ATAACCACAGTGTGA TAAAACGGTGCCAGAG GTG TTCTGGTACCGTTTTA TTTCCCCCTCTAATC TERM 1863 1682612 - 1682588 - T 93 -10 -4.39426 | opp_overlap 1682588 1682583 CACAGTGTGATAAAA CGGTGCCAGA GGTGT TCTGGTACCG TTTTATTTCCCCCTC TERM 1864 1682588 - 1682612 + T 100 -12.9 -4.87803 | opp_overlap 1682588, overlap 1682583 CACAGTGTGATAAAA CGGTGCCAGAG GTG TTCTGGTACCG TTTTATTTCCCCCTC YP_1535 1683875 - 1682697 - | hypothetical protein TERM 1865 1684191 - 1684236 + H 80 -9.9 -3.69684 | gap 1, opp_overlap 1684199 TGCTGATTAGCTTAT GGTTAATAGGTGTCATTAGCCG CGA CGACTAATGACATC-ATCAGCC TTATTCAATAAATTT TERM 1866 1684229 - 1684199 - H 100 -13.4 -3.04263 | opp_overlap 1684191 AGCTTATGGTTAATA GGTGTCATTAGCCG CGA CGACTAATGACATC ATCAGCCTTATTCAA wrbA 1684254 - 1684868 + | TrpR binding protein WrbA TERM 1867 1684947 - 1684925 - T 91 -7.7 -4.8667 | opp_overlap 1684925 1684923 1684921 TAGACGTCATAAAAA GCACCGC GCGATGATG GCGGTGC TGTATTTTAAGCTTC YP_1537 1686258 - 1684954 - | iron-dependent peroxidase TERM 1868 1685440 - 1685455 + g 77 -9 -4.00042 | TCCCCCTACCGCCCA TGCAGG CTCG CCTGCA TTATTTGATACCCAG TERM 1869 1686200 - 1686185 - G 74 -7.5 -4.20136 | overlap 1686186 ATCCCTAAAATTAAA CGCCG ACGTGA CGGCG ACACCGCCTCATCAT TERM 1870 1686225 - 1686245 + g 100 -12.5 -4.63586 | overlap 1686215 1686226 CATCATCCGGTTGAT ACGGCCCGA ATT TCGGGCCGG TTTTGTCTCTCATGT TERM 1871 1686226 - 1686244 + g 100 -16 -3.37067 | overlap 1686215 1686225 ATCATCCGGTTGATA CGGCCCGA ATT TCGGGCCG GTTTTGTCTCTCATG YP_1538 1687423 - 1686269 - | hypothetical protein TERM 1872 1686909 - 1686931 + g 74 -8.4 -4.08485 | AGTGCCAGATCCCCA GCCTTCACTG CAT CGGTGAACGC TTTGGTTTGGCTGAC fTR11 1688286 - 1687429 - | hypothetical protein TERM 1873 1688570 - 1688541 - R 73 -8.6 -3.59698 | opp_overlap 1688543 1688545, overlap 1688543 TGATTTTACATACAA GATAGCCCCCTG TTATGG CAGGAGGCTATG TGTAGTTAAACGTAT TERM 1874 1688543 - 1688568 + r 73 -9.7 -3.00476 | opp_overlap 1688543 1688541, overlap 1688545 ATTTTACATACAAGA TAGCCCCCTGT TATG GCAGGAGGCTA TGTGTAGTTAAACGT TERM 1875 1688568 - 1688543 - R 81 -11.2 -3.37466 | opp_overlap 1688543 1688545, overlap 1688541 ATTTTACATACAAGA TAGCCCCCTG TTATGG CAGGAGGCTA TGTGTAGTTAAACGT putP2 1690094 - 1688610 - | proline permease TERM 1876 1688713 - 1688699 - G 76 -4.2 -4.91109 | overlap 1688701 GGCTGACGACAAAAA TAGCCA AAC TGGCAA ACAAGAAGCCTGGAA YP_1541 1690321 - 1690124 - | hypothetical protein TERM 1877 1691098 - 1691087 - g 78 -2.2 -5.26875 | gap 1, overlap 1691088 TGCGTAATCAAAAAA GTGCC CAT GGC-C GCGCGGGCATGGTAC TERM 1878 1692892 - 1692915 + G 70 -9.6 -3.28745 | opp_overlap 1692873, overlap 1692895 AGTAATGCCATCGCC GAAGTCCGTG AAGC CGTGGACTTC TTGCATTATTACGCC putA 1690666 - 1694637 + | trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase TERM 1879 1694710 - 1694723 + F 83 -9.5 -4.07568 | opp_overlap 1694710 CGGTTTATCAATTAA GGCCC TTCG GGGCC TTTTGCCAACCAACA TERM 1880 1694723 - 1694710 - f 74 -9.5 -3.39895 | opp_overlap 1694710 CGGTTTATCAATTAA GGCCC TTCG GGGCC TTTTGCCAACCAACA YP_1543 1695101 - 1695436 + | hypothetical protein arsR2 1695412 - 1695807 + | hypothetical protein TERM 1881 1695846 - 1695822 - T 100 -12.2 -3.78312 | opp_overlap 1695820 AAATTATCTAGCAAA TTGGGGACCA TACCG TGGCCCCCAA CATATTAAAAATGCC TERM 1882 1695942 - 1695928 - T 100 -10 -4.72272 | opp_overlap 1695922 TTTTGCCACCAAAAA CCACTG AAT CAGTGG TTGAGGTTATTGACA TERM 1883 1696021 - 1696047 + T 72 -10.1 -2.88849 | gap 1, opp_overlap 1696010, overlap 1696016 1696022 ACATCCATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCTCTGCC TERM 1884 1696022 - 1696048 + T 84 -10.1 -3.82218 | gap 1, opp_overlap 1696010, overlap 1696016 1696021 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCTCTGCCT glnQ2 1696860 - 1696099 - | putative amino-acid ABC transporter ATP-binding protein YecC artM4 1697525 - 1696863 - | putative amino-acid ABC transporter (permease) TERM 1885 1697506 - 1697487 - G 100 -12.2 -5.06816 | opp_overlap 1697486 ACCCTTCAATAAAAA TGGTGCTG AATC CAGCACCA ATTGCATACTTTCTG fliY 1698325 - 1697525 - | cystine transporter subunit Acd 1699441 - 1698449 - | D-cysteine desulfhydrase fliZ 1700239 - 1699730 - | protein FliZ TERM 1886 1700202 - 1700215 + g 95 -5.9 -5.47218 | opp_overlap 1700202 TAATCTTTTAAATAA CGGCT CAGC GGCCG TTTTTTTAACTGGAG fliA 1701183 - 1700461 - | flagellar biosynthesis sigma factor TERM 1887 1701355 - 1701365 + r 81 -5.4 -5.10064 | CCTTGAAGTGCATTC TCAG CGT CTGA TTTTTATCTGTTCCC TERM 1888 1701501 - 1701486 - R 91 -8.2 -4.69027 | overlap 1701476 AAACTGAGGTAAAAA CCCCGC CGCA GCAGGG TTGGAATAAGGGTAT fliC 1702639 - 1701530 - | flagellin fliD 1702936 - 1704336 + | flagellar capping protein TERM 1889 1704447 - 1704461 + GF 91 -12.8 -2.71144 | opp_overlap 1704456, overlap 1704447 TGATGCTGTTCGATG GGGCGC AAA GCGCCC TGATTCGCGCACGTA fliS 1704347 - 1704745 + | flagellar protein FliS fliT 1704705 - 1705118 + | flagellar biosynthesis protein FliT TERM 1890 1705348 - 1705361 + G 83 -3.1 -5.46657 | TTATAGTCGAAGTGG CTTGC TATG GTAAG TTTTTTATTAAAATA YP_1555 1705173 - 1705433 + | hypothetical protein araC3 1705437 - 1706315 + | AraC family transcriptional regulator TERM 1891 1706481 - 1706492 + F 70 -5.8 -4.40561 | opp_overlap 1706490 CTTTTAGATATTTTG CGCT TTAA AGCG TTCTTTTTAAGGCCG TERM 1892 1707015 - 1707027 + F 95 -4.7 -5.80817 | overlap 1707016 CCGTATACAGCGCTT ACCCC AAT GGGGA TTTTTTTATGTTGCG TERM 1893 1707016 - 1707026 + F 77 -8.2 -4.06863 | overlap 1707015 CGTATACAGCGCTTA CCCC AAT GGGG ATTTTTTTATGTTGC TERM 1894 1708132 - 1708151 + F 70 -3.6 -4.79223 | overlap 1708135 GCCATCGTTGCAGGT TAATGAAG ATAA CTTCAATA TTTTTAATCCTGTAC TERM 1895 1708543 - 1708530 - f 89 -6.7 -5.38549 | CTGAAATAACAAAAA TGCTC GCCA GAGCA GCGATGGAGAGTAAA alkA 1709785 - 1710396 + | putative glycosidase TERM 1896 1710562 - 1710547 - T 80 -6.1 -4.8066 | opp_overlap 1710547 AAGATAACGCAAAAA CCCAC AGCTAA GTGGG TTGATATCTCATACG Doc 1711058 - 1710582 - | prophage maintenance system killer protein YP_1560 1711374 - 1711069 - | hypothetical protein fliE 1711979 - 1711668 - | flagellar hook-basal body protein FliE TERM 1897 1711885 - 1711903 + g 70 -4.5 -4.72272 | gap 1, overlap 1711882 1711885 AGTTCACTGGCGAAG CCC-GCCT CTGC GGGCAGGG TTTTTGCTGACCCCG TERM 1898 1712468 - 1712486 + G 77 -11 -3.3573 | overlap 1712457 TTGTCGCCTTGATGC TCTGGGCT AAA AGCCCGGA TTATCGCGTCCTTTA fliF 1712332 - 1714044 + | flagellar MS-ring protein fliG 1714041 - 1715033 + | flagellar motor switch protein G fliH 1715026 - 1715742 + | flagellar assembly protein H fliI 1715681 - 1717159 + | flagellum-specific ATP synthase fliJ 1717259 - 1717705 + | flagellar biosynthesis chaperone fliK1 1717702 - 1719054 + | flagellar hook-length control protein FliK fliL 1719321 - 1719791 + | flagellar basal body-associated protein FliL TERM 1899 1720128 - 1720118 - g 76 -8.2 -4.18018 | opp_overlap 1720124 CTGGTGCATCTAAAA CCGC TAC GCGG TACTGCGCTATTCGT fliM 1719797 - 1720798 + | flagellar motor switch protein FliM TERM 1900 1720907 - 1720888 - g 76 -3.4 -5.1485 | overlap 1720892 CAAGCAACAGAAAAA CCCACGGC CACA ACCGAAGG CGTCTTTAAATCGCT fliN 1720795 - 1721211 + | flagellar motor switch protein FliN TERM 1901 1721368 - 1721394 + G 76 -12.2 -3.02144 | opp_overlap 1721363 1721362 CGCAATCAAGCGCCG CCCCCCCGGC CATGCCT GCAGGGGGGG TGTTAACGCAGGTGG fliO 1721211 - 1721747 + | flagellar biosynthesis protein fliP 1721828 - 1722568 + | flagellar biosynthesis protein FliP fliQ 1722674 - 1722943 + | flagellar biosynthesis protein FliQ fliR 1722946 - 1723728 + | flagellar biosynthesis protein FliR YP_1575 1723749 - 1724117 + | hypothetical protein YP_1576 1724162 - 1724581 + | hypothetical protein TERM 1902 1724606 - 1724621 + T 71 -8.2 -3.55203 | overlap 1724615 TGTCGCTGCTTATCG CCCCGT TTCG GCGGGG TTTACCCCCCCTTTT TERM 1903 1724615 - 1724632 + T 87 -8.3 -4.41548 | overlap 1724606 TTATCGCCCCGTTTC GGCGGGG TTTA CCCCCCC TTTTCTGACCTCTCG rbsK3 1725798 - 1724839 - | putative sugar kinase TERM 1904 1725151 - 1725135 - G 71 -7.9 -4.11216 | CCCCCATTTTGAAAA CGGTGTG GCC CACCCCG CGGTTCAGGAAAAAC araH7 1726869 - 1725847 - | putative permease of ABC transporter mglA5 1728515 - 1726872 - | ATP binding protein of ABC transporter for ribose rbsB6 1729510 - 1728515 - | putative sugar-binding periplasmic protein TERM 1905 1728641 - 1728655 + g 86 -5.6 -5.24129 | CACCCCCAGATTCAT CCCATC AGT GAGGGG TTTTTTATCGAGCAG TERM 1906 1728699 - 1728673 - G 88 -14.4 -3.4252 | opp_overlap 1728670 1728669 1728667 TTTTATCGAGCAGAA GCTTGGCGACGG TAT CCATCGCCAGGC TGGCATCTTTAGGAT araH8 1730629 - 1729553 - | putative sugar transport system permease protein YP_1582 1732813 - 1730741 - | short chain dehydrogenase deoR6 1733025 - 1734026 + | putative transcriptional regulatory protein flgL 1735068 - 1734055 - | flagellar hook-associated protein FlgL TERM 1907 1734362 - 1734374 + g 70 -3.3 -4.77157 | ACCTCGTCAGAGGCT CCTTG CAG CGGGG TTTTTAATGAATTCA TERM 1908 1734405 - 1734415 + g 85 -4 -5.40072 | GTACCGTATCAATGG TATC AAA GATA TTTTTTTCCGCAGCA flgK 1736838 - 1735174 - | flagellar hook-associated protein FlgK TERM 1909 1735415 - 1735400 - G 70 -8.2 -3.76402 | opp_overlap 1735410 ACGTTACTGACTAAA CCGGCG TAAG CACCGG ACAAGGTGGTTTTAC TERM 1910 1736381 - 1736398 + g 72 -9.9 -3.38178 | CCGTCATCCATATCC CGCAGAT ATTT ATCTGCG TTCTGGAATTGGTTC flgJ 1738367 - 1737423 - | peptidoglycan hydrolase flgI 1739476 - 1738367 - | flagellar basal body P-ring protein flgH 1740222 - 1739491 - | flagellar basal body L-ring protein TERM 1911 1740287 - 1740321 + r 72 -9.8 -2.74144 | overlap 1740286 AGACCTATTATGCTG CGGCGATCAGGGGGCA TGA TGCCCCCCGAAAGCAG GTTTACAGCTGAGCC flgG1 1741022 - 1740324 - | flagellar basal-body rod protein FlgG flgF 1741632 - 1741003 - | flagellar basal body rod protein FlgF flgE 1742940 - 1741654 - | flagellar hook protein FlgE TERM 1912 1742723 - 1742699 - G 80 -4.9 -5.1287 | overlap 1742700 1742701 TGCATACGGAAAAAA CCGTTCTGGCT GAT AGCCAGATCCA AACGACGATTAGTGG flgD 1743819 - 1743142 - | flagellar basal body rod modification protein flgC 1744238 - 1743834 - | flagellar basal body rod protein FlgC flgB 1744657 - 1744244 - | flagellar basal body rod protein FlgB flgA 1744830 - 1745594 + | flagellar basal body P-ring biosynthesis protein FlgA flgM 1745745 - 1746047 + | anti-sigma28 factor FlgM flgN1 1746063 - 1746506 + | flagella synthesis protein FlgN TERM 1913 1746557 - 1746587 + T 100 -17 -3.51161 | opp_overlap 1746557, overlap 1746560 ATCCTTTTAAAAAAA CAACGCCGCTCA ATTAACC TGAGCGGCGTTG TTCTCTGGACGTTTG TERM 1914 1746587 - 1746557 - T 100 -17.7 -5.40474 | opp_overlap 1746557 1746560 ATCCTTTTAAAAAAA CAACGCCGCTCAA TTAAC CTGAGCGGCGTTG TTCTCTGGACGTTTG TERM 1915 1746560 - 1746584 + T 100 -12.9 -3.885 | opp_overlap 1746557, overlap 1746557 CTTTTAAAAAAACAA CGCCGCTCA ATTAACC TGAGCGGCG TTGTTCTCTGGACGT TERM 1916 1748784 - 1748752 - T 100 -11.3 -4.26076 | opp_overlap 1748759, overlap 1748756 1748758 1748759 TTATCTTTACCAAAA TAAATATCCTCCGGC ATA GCCGGAGGTTTTTCA TATGCGCCTATAAGG TERM 1917 1748780 - 1748756 - T 100 -9.9 -4.72007 | opp_overlap 1748759, overlap 1748752 1748758 1748759 CTTTACCAAAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCATATGCGCCTAT TERM 1918 1748778 - 1748758 - T 100 -12.5 -3.97149 | opp_overlap 1748759, overlap 1748756 1748752 1748759 TTACCAAAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 1919 1748759 - 1748777 + T 100 -16 -4.8048 | opp_overlap 1748758 1748756 1748752 1748759 TACCAAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 1920 1748777 - 1748759 - T 100 -16 -2.97205 | opp_overlap 1748759, overlap 1748758 1748756 1748752 TACCAAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC tnp_19 1749316 - 1748858 - | transposase for the IS1541 insertion element TERM 1921 1749447 - 1749429 - R 100 -16 -3.07307 | opp_overlap 1749429 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAT TERM 1922 1749429 - 1749447 + r 100 -16 -4.37092 | opp_overlap 1749429 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAT flhE 1751396 - 1750974 - | flagellar protein FlhE precursor flhA 1753474 - 1751396 - | flagellar biosynthesis protein FlhA TERM 1923 1752467 - 1752480 + g 74 -6.7 -4.42062 | overlap 1752463 GGGTGCTTCTACTGC CACAG GCTG CTGTG TTTGTTTACCACGTA TERM 1924 1752913 - 1752925 + g 74 -2.6 -5.17576 | CAGCCTCTTGCGTAA CGTC AGAGC GGCG TTTTTTCGCTTCATC TERM 1925 1753196 - 1753208 + g 73 -9.1 -3.78775 | opp_overlap 1753195 1753192 CATCAGAATAATACG CGTGG AAG CCACG TTTAGTGATAGACGC flhB 1754634 - 1753474 - | flagellar biosynthesis protein FlhB TERM 1926 1753877 - 1753890 + g 70 -9.5 -3.21218 | ACCATCATCCGACGA CGGGC CATC GCCCG TTGCTGCTGACGAAT TERM 1927 1755378 - 1755364 - g 70 -4.2 -4.65078 | overlap 1755375 ATAGGTGCAACAAAA GGCACA TCA TACGCC TCCAAAGCGGCACGA TERM 1928 1755428 - 1755415 - g 78 -2.3 -5.27476 | overlap 1755416 TTTAAGAAAACAAAA TTCCC ATTT GGGAT GTCGCTACCTACATG YP_1603 1755166 - 1755624 + | hypothetical protein acpP2 1755618 - 1755944 + | putative acyl carrier protein TERM 1929 1755951 - 1755968 + T 75 -8.4 -3.89336 | opp_overlap 1755950 TATGACTGAAATAGG CTGGGC TTAATT GCCCAG TTTCGCTTTGGTTAA YP_1605 1756187 - 1755957 - | hypothetical protein TERM 1930 1756081 - 1756064 - G 71 -5.5 -4.57073 | CAGTTCGCCCAAAAA CGGCTTG GCCA CAAGTCG ATGAAAATGACTCAT TERM 1931 1756238 - 1756211 - R 100 -7.8 -5.77856 | AATAAATTAAAAAAA GACCGAATACGA TTCC TGATATTCGGTC TAGGGAAATGGCTCT YP_1606 1756823 - 1756467 - | hypothetical protein pcoD 1757789 - 1756905 - | putative copper resistance protein D TERM 1932 1757740 - 1757714 - G 77 -12.4 -3.03903 | overlap 1757716 AAAAGGCGGTGAATA CAGTGATGCCAA ACA TCAGCATCACTG CCATAAAGTGCAGAA copC 1758337 - 1757792 - | hypothetical protein TERM 1933 1758538 - 1758526 - g 76 -3.3 -5.18715 | overlap 1758527 AGAAAAACAAGAAAA GGCGA GGA TCGCG GGGAGGGATAGGCAA YP_1609 1758392 - 1758577 + | hypothetical protein TERM 1934 1758589 - 1758561 - T 100 -10.3 -4.47456 | ATAGGCAACAACAAA GCCGCAGTACC CAATAAT AGTACCGCGGC GAATATTTTCTCAAT ftnA 1759230 - 1758610 - | ferritin TERM 1935 1758966 - 1758985 + g 70 -2.2 -5.00616 | gap 1, opp_overlap 1758983, overlap 1758970 AACGTTCCATATGTT GCATTTCTT CTT GAGA-ATGC TTTTTTAAAAAGGCA holE 1759520 - 1759750 + | DNA polymerase III subunit theta pip 1760760 - 1759810 - | proline iminopeptidase TERM 1936 1761221 - 1761238 + r 100 -9.8 -5.66229 | opp_overlap 1761221 CGTTTCGTGAGTTAA CCCGCC ATTATC GGCGGG TTTTTTATTGTTCAT TERM 1937 1761238 - 1761221 - R 76 -10.5 -3.05384 | opp_overlap 1761221 CGTTTCGTGAGTTAA CCCGCCA TTAT CGGCGGG TTTTTTATTGTTCAT ptrB 1763533 - 1761482 - | oligopeptidase B TERM 1938 1763770 - 1763750 - R 72 -9.7 -2.83112 | opp_overlap 1763764 ATTGAATTGACCAGA TGGAGGGCA ATA TGCCCTCAA ACATAGCGGGTTATT YP_1614 1764268 - 1763843 - | hypothetical protein YP_1615 1764686 - 1764360 - | hypothetical protein YP_1616 1765028 - 1764708 - | hypothetical protein dbpA 1766504 - 1765122 - | ATP-dependent RNA helicase DbpA TERM 1939 1767858 - 1767818 - g 72 -9.8 -3.37975 | gap 1, overlap 1767808 ACTGACCAGCCAGAA TATCACCTATCGCGGGCTG GAAA CTGCCCT-GATAGGCGATA CACAGATTCGGTTAT purT 1766817 - 1767998 + | phosphoribosylglycinamide formyltransferase 2 TERM 1940 1768061 - 1768034 - T 87 -8.5 -4.49958 | opp_overlap 1768034, overlap 1768038 ACGCTAGCAAATAAA TAAACCCGCCA TTCAGC CAGCGGGTTTA TTTTTATCTATCAAT TERM 1941 1768034 - 1768061 + T 89 -7.1 -5.04597 | opp_overlap 1768034 1768038 ACGCTAGCAAATAAA TAAACCCGC CATTCAGCCA GCGGGTTTA TTTTTATCTATCAAT TERM 1942 1768057 - 1768038 - T 74 -4.9 -4.80736 | opp_overlap 1768034, overlap 1768034 TAGCAAATAAATAAA CCCGCCA TTCAGC CAGCGGG TTTATTTTTATCTAT YP_1619 1768381 - 1768124 - | hypothetical protein pabB 1768546 - 1769922 + | para-aminobenzoate synthase component I mutT2 1769919 - 1770518 + | hypothetical protein TERM 1943 1770527 - 1770542 + F 86 -11.8 -3.07962 | opp_overlap 1770527 TATTTGACTCATAAA GCCGCC ATTT GGCGGC TGTTAACCTGTGACA TERM 1944 1770542 - 1770527 - f 100 -11.8 -3.92373 | opp_overlap 1770527 TATTTGACTCATAAA GCCGCC ATTT GGCGGC TGTTAACCTGTGACA TERM 1945 1770909 - 1770889 - f 70 -7.5 -3.79993 | TTAGAGACCAAAATA TACCGGGCC ATT GACCCCGTA GCTGAATAACTAGAA TERM 1946 1771639 - 1771651 + G 71 -5.5 -4.56607 | opp_overlap 1771637, overlap 1771637 GCAAAACATACTACT CCATC GGC GGTGG TTTTATCGTTGATGA sdaA 1771206 - 1772570 + | L-serine dehydratase TERM 1947 1772552 - 1772570 + T 78 -2.4 -5.47218 | overlap 1772556 TGGTGGCCTGGCGAT TAAAGTGC AGT GTACTTGA TTTTTTTCGCTGACA TERM 1948 1772721 - 1772739 + T 100 -8.8 -4.82901 | opp_overlap 1772709 AAAGGATGGCGCGGC TAGCCCCC AGG GAGGGCTA TTTTTATGCAGGGAA TERM 1949 1772809 - 1772848 + T 100 -15.2 -3.55444 | opp_overlap 1772809 GCACTTTGTCAACAA CCTCTAATGCACGTCA GTTAAATA TGACGGGCATTAGAGG TTTACACCATCACCG TERM 1950 1772848 - 1772809 - T 100 -15.2 -3.62046 | opp_overlap 1772809 GCACTTTGTCAACAA CCTCTAATGCACGTCA GTTAAATA TGACGGGCATTAGAGG TTTACACCATCACCG hpaC 1773347 - 1772850 - | 4-hydroxyphenylacetate 3-monooxygenase coupling protein hpaB 1774930 - 1773368 - | 4-hydroxyphenylacetate 3-monooxygenase hpaX 1776365 - 1774998 - | putative 4-hydroxyphenylacetate permease TERM 1951 1775592 - 1775622 + g 75 -10.5 -3.36569 | overlap 1775583 1775589 1775593 AATTTCCCGCCACAT CGCGGATTGTGGT AAGGC ACCATAATCCGCC TGTTTCGCCAATTGC TERM 1952 1775593 - 1775621 + g 81 -14 -2.6162 | overlap 1775583 1775592 1775589 ATTTCCCGCCACATC GCGGATTGTGGT AAGGC ACCATAATCCGC CTGTTTCGCCAATTG TERM 1953 1776297 - 1776312 + g 76 -3.2 -5.06414 | GACGGACTGCTGCTG CGCACT TAAT GGTGTG TTTTTATTGACCGGC hpaI 1777215 - 1776391 - | 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase TERM 1954 1777132 - 1777149 + g 91 -2.7 -5.72207 | GCTACACAAACCTAG CCATAAG CCAA TTTGTGG TTTTTTTGCTTTCAG hpaH 1778011 - 1777208 - | 2-oxo-hept-3-ene-1,7-dioate hydratase TERM 1955 1777398 - 1777410 + g 71 -10.5 -3.10344 | opp_overlap 1777391 TGATTCAATACCGCC GCGGC AAC GCCGC TCTCTTCAATCACGC hpaF 1778403 - 1778005 - | 5-carboxymethyl-2-hydroxymuconate delta-isomerase hpaD 1779285 - 1778428 - | 3,4-dihydroxyphenylacetate 2,3-dioxygenase hpaE 1780801 - 1779404 - | 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase TERM 1956 1779970 - 1779952 - G 74 -2.3 -5.06414 | TCTCTTGAATAAAAA TGCGCGA ACCCG CCGTGCA ACGTTCACCATTGAG TERM 1957 1782004 - 1781990 - H 73 -10 -2.96249 | overlap 1781987 CCTGACCAACAACCA GTGCCA AGG TGGCAC CACTCATCACGGTAA TERM 1958 1782346 - 1782322 - H 78 -10.3 -3.31144 | opp_overlap 1782320 1782322 1782325, overlap 1782325 1782344 TCGTGATCTTGATAA CAATTTATTTA CAA TAAATAAATTG TCTTTAAAAAAACAA TERM 1959 1782322 - 1782346 + H 78 -10.3 -3.34398 | opp_overlap 1782322 1782325 1782344, overlap 1782320 1782325 TCGTGATCTTGATAA CAATTTATTTA CAA TAAATAAATTG TCTTTAAAAAAACAA TERM 1960 1782609 - 1782619 + G 87 -4.6 -5.42862 | TTGCAGGCTCGTGAA GCCG CTA TGGC TTTTTTTCGGCCTAT hpcR 1782558 - 1783034 + | homoprotocatechuate degradative operon repressor TERM 1961 1783122 - 1783095 - T 100 -17 -3.62046 | opp_overlap 1783089 GTACGTTGTCAATAA CCTCAGGGGAGC CGAA GCGCCCCTGAGG TTCCACTCTCTGCTT terC2 1784704 - 1783136 - | hypothetical protein manX1 1785457 - 1786365 + | PTS system, mannose-specific IIAB component manY 1786415 - 1787254 + | PTS system, mannose-specific IIC component TERM 1962 1787629 - 1787662 + G 70 -9.5 -3.33162 | overlap 1787637 CATTAAAGTGGGTCT GATGGGGCCACTGGC CGGT GTCGGTGACCCGATC TTCTGGGGTACCGTA manZ 1787261 - 1788148 + | mannose-specific PTS system protein IID TERM 1963 1788171 - 1788194 + F 100 -8.8 -4.89567 | opp_overlap 1788174, overlap 1788174 GATTATCTTCATCCA AAACCGGGGG CTTG CTCCCGGTTA TTTTATCTTTTAGAC TERM 1964 1788191 - 1788174 - f 79 -8.3 -4.18494 | opp_overlap 1788171 1788174 TATCTTCATCCAAAA CCGGGGG CTTG CTCCCGG TTATTTTATCTTTTA TERM 1965 1788174 - 1788191 + F 100 -10.5 -4.52747 | opp_overlap 1788174, overlap 1788171 TATCTTCATCCAAAA CCGGGGG CTTG CTCCCGG TTATTTTATCTTTTA YP_1637 1788348 - 1788809 + | hypothetical protein TERM 1966 1789544 - 1789533 - g 78 -2.2 -5.24449 | CAGAAACGGAAAAAA TGCG CAGT CACA GTTTTTGGGTGTTGG YP_1638 1789238 - 1789807 + | hypothetical protein TERM 1967 1789900 - 1789862 - f 100 -24.8 -3.00946 | opp_overlap 1789866, overlap 1789866 CTGCGCGATAAATGA GAAATCCCCCGGCGATAT ATC AAATCGCCGGGGGATTTC AGTAAAGCACCTGTT TERM 1968 1789866 - 1789896 + F 100 -19.8 -3.64703 | opp_overlap 1789862 1789866 GCGATAAATGAGAAA TCCCCCGGCGATAT ATC AAATCGCCGGGGGA TTTCAGTAAAGCACC TERM 1969 1789896 - 1789866 - f 100 -19.8 -4.17701 | opp_overlap 1789866, overlap 1789862 GCGATAAATGAGAAA TCCCCCGGCGATAT ATC AAATCGCCGGGGGA TTTCAGTAAAGCACC TERM 1970 1790310 - 1790320 + F 74 -6.8 -4.33165 | GTTACCGTTGTTCGT CCCA TTT TGGG TTTTAGTCAGTTTAG TERM 1971 1791805 - 1791831 + F 70 -5.8 -4.36914 | overlap 1791806 1791828 1791830 CGAATACGGTAATTC TGTGATGGGTTA CCA TAACCCCGCACG TTTTGTACCGAAGCG TERM 1972 1792267 - 1792285 + F 100 -13.2 -4.01078 | CCAGGGGGTAATCTG CTCTCCTG ATT CAGGAGAG TTTATGGTCACTTTT YP_1641 1792289 - 1793311 + | transposase for insertion sequence IS100 TERM 1973 1793392 - 1793378 - g 77 -11.4 -3.3506 | overlap 1793369 TGGAAAGCCTTATAA GCGCAG CGC CTGCGC TGTCACAACAGGCAG dnaC_13 1793308 - 1794090 + | transposase/IS protein TERM 1974 1794482 - 1794457 - T 100 -10.5 -4.34402 | TGGTGCATATTAAAA TGTGCGGAG CTATTCTC CTCCGCACA TACAGATTTAACGTC dksA2 1794699 - 1794490 - | DnaK suppressor protein YP_1644 1795270 - 1794689 - | hypothetical protein YP_1645 1795440 - 1795276 - | hypothetical protein alpA2 1795740 - 1795459 - | putative transcriptional regulator TERM 1975 1795722 - 1795755 + g 95 -15.5 -3.31322 | opp_overlap 1795713 1795729 1795743, overlap 1795729 1795732 GAGAAAGCTGGTGAG CCCTAAATAAGGGAT GCAA AACCCTTATTTAGGG TTGTCGGCCATTACA YP_1647 1796338 - 1795784 - | hypothetical protein TERM 1976 1796003 - 1796016 + g 93 -3.8 -5.72616 | opp_overlap 1796003 ACGGGAAGGTGAAAT GGGA TGACTC TCCC TTTTTTTGTATAAAT TERM 1977 1796169 - 1796187 + g 76 -4.6 -4.96501 | ACATCTAATGCTGTG TTTTCAGG TAG TCTGGAAA TTTGTTTTTCTACGC YP_1648 1796768 - 1796346 - | hypothetical protein TERM 1978 1796682 - 1796699 + g 83 -2.7 -5.44721 | TGACATATAATGAGT TATAAGC AATG GCTGATA TTTTTTTGACATAAT TERM 1979 1797572 - 1797552 - R 93 -11.2 -4.08945 | opp_overlap 1797552 ACTAGTGGTGTAAAA GGGATACC TTTTC GGTATCCC TTTTACAATAATCAG TERM 1980 1797552 - 1797572 + r 93 -11.2 -4.15565 | opp_overlap 1797552 ACTAGTGGTGTAAAA GGGATACC TTTTC GGTATCCC TTTTACAATAATCAG fyuA 1799605 - 1797584 - | pesticin/yersiniabactin receptor protein TERM 1981 1799404 - 1799423 + g 76 -12.8 -2.60244 | overlap 1799400 CTCTGGGGAGTTTGT CGCTGGCG GTGA CGCCGGCG TCGCTTAATTCCGGC TERM 1982 1799689 - 1799728 + r 90 -11.5 -3.72051 | overlap 1799690 1799693 1799693 ATTTCTAATAGTGGT GCTACCCGAAACGGGTT TATTTC AACCTGTTTCGGGTCGG TTTGCGCTTATTGGG TERM 1983 1799690 - 1799727 + r 100 -15 -2.82749 | overlap 1799689 1799693 1799693 TTTCTAATAGTGGTG CTACCCGAAACGGGTT TATTTC AACCTGTTTCGGGTCG GTTTGCGCTTATTGG TERM 1984 1799693 - 1799703 + r 87 -8.2 -4.43208 | overlap 1799690 1799689 1799693 CTAATAGTGGTGCTA CCCG AAA CGGG TTTATTTCAACCTGT TERM 1985 1799693 - 1799724 + r 100 -15.3 -2.66593 | overlap 1799693 1799690 1799689 CTAATAGTGGTGCTA CCCGAAACGGGTT TATTTC AACCTGTTTCGGG TCGGTTTGCGCTTAT TERM 1986 1799758 - 1799783 + r 91 -6.7 -5.46276 | opp_overlap 1799758, overlap 1799760 GCAGAATGGCGATAA CGGTCGACGGC GAGA GCCGTCAGGCG TTTTTTGTCTATCTT TERM 1987 1799760 - 1799782 + r 72 -7.7 -3.85325 | gap 1, opp_overlap 1799758, overlap 1799758 AGAATGGCGATAACG GTC-GACGGC GAGA GCCGTCAGGC GTTTTTTGTCTATCT ybtE 1801313 - 1799736 - | yersiniabactin siderophore biosynthetic protein TERM 1988 1800378 - 1800368 - G 71 -6.8 -4.2349 | overlap 1800345 CCGCCATACCGAAAA CCTG TTG CAGG GTACAGTCAAAGGTG TERM 1989 1800453 - 1800471 + g 71 -10.3 -3.04461 | opp_overlap 1800449, overlap 1800455 TGCCTGAATGACGCG CAGCGAC GAAAG GTCGCTG TCTTCCCACTCCCTG ybtT 1802120 - 1801317 - | yersiniabactin biosynthetic protein YbtT ybtU 1803217 - 1802117 - | yersiniabactin biosynthetic protein YbtU TERM 1990 1802719 - 1802709 - G 71 -5.4 -4.48713 | GCCAGCAACAACAAA TCCA GAG TGGA GTAGAGCAACTGTCG irp1 1812705 - 1803214 - | yersiniabactin biosynthetic protein TERM 1991 1803497 - 1803517 + g 71 -7.5 -4.07885 | overlap 1803498 TTGTCGAGCCACGTT TCTGCCGCT TGC AGCGTCAGG TTTTGCGACACCATA TERM 1992 1806676 - 1806690 + g 79 -11.4 -3.61398 | ATGCCGCCGTTTTTC CAGCGC GAT GCGCTG TTCTTCCGGGGAAAG TERM 1993 1807307 - 1807317 + g 70 -2.4 -4.9725 | overlap 1807308 GCAGGAGGAATGACC GGCG TTG CGGC TTTTTCTGTGGCGCT TERM 1994 1807470 - 1807490 + g 79 -11.1 -3.55444 | overlap 1807471 ACGCGCCCATACCTC GGCTGGCGA GCG TCGCCAGCA TTTCCGGCGTGGCCG TERM 1995 1807471 - 1807489 + g 82 -14.6 -2.73124 | overlap 1807470 CGCGCCCATACCTCG GCTGGCGA GCG TCGCCAGC ATTTCCGGCGTGGCC TERM 1996 1807747 - 1807704 - G 80 -13.2 -3.02144 | gap 1 GCAGGGTTTGCAACA GCTGGCTTGCCGCCTGCGC TTTTACC GCGAAAACGGCA-GCCAGC TGGTGGTCATCAAGC TERM 1997 1807898 - 1807881 - G 70 -11.3 -2.67747 | overlap 1807880 CGCCCACATCACAAC GGCAGAC GCGC GTCTGCC CGCCCTCCACGTCGC TERM 1998 1807935 - 1807965 + g 73 -3.2 -4.96848 | gap 1, overlap 1807937 1807947 ATGACTCATCCACGC GCGGCGCCA-GCA GGGCGA TGCGTCGCGCCCC TTTTTCTCTGAGCCA TERM 1999 1810284 - 1810272 - G 74 -4.7 -4.84359 | CCATCTCCAGAAAAA CGCGG GCG CCGAG CTGATGCGCCACCTG TERM 2000 1811109 - 1811135 + g 86 -13.6 -3.64682 | CCCCCGATTTCTCAC CGGCCCAGGCGC TGA GCGCCTCGGCGG TTTCACGGTTTAATG TERM 2001 1811265 - 1811306 + g 85 -7.9 -4.84761 | gap 1, opp_overlap 1811250 1811249, overlap 1811268 1811269 CCGTCGCCAGCCGCC GCAACGCGCTGTCGCT-GGC GGC GCTGAGCAGCAGCGCGGTAC TTTTTCTGCCGCTAT TERM 2002 1811269 - 1811302 + g 73 -11.7 -2.58667 | gap 1, opp_overlap 1811250 1811249, overlap 1811268 1811265 CGCCAGCCGCCGCAA CGCGCTGTCGCT-GGC GGC GCTGAGCAGCAGCGCG GTACTTTTTCTGCCG TERM 2003 1811781 - 1811821 + g 78 -12.5 -2.93073 | overlap 1811789 1811793 TGACTGCCTGTTGCC CTGCGACGGAAGGGGCGGT ATA GCCGACCTTTCTGTTGCCG TCGTTGTTGACCGCG TERM 2004 1812770 - 1812740 - R 78 -10.5 -3.33711 | gap 1, overlap 1812735 GATTCACAAAGTCAA TGGAACGCCAT-GC GTTC GCGATGGCGTTCCG GGGAAAATCAGTTTG irp2 1818918 - 1812793 - | yersiniabactin biosynthetic protein TERM 2005 1813093 - 1813135 + g 75 -10.5 -3.34398 | gap 1, overlap 1813091 GTGTGGCTGAGAGTG CTCAGGGCATACGCGCGGTG AGCG CTCTGCGCAT-TGCCCTGCG TGTTTAACGGGAGGC TERM 2006 1813164 - 1813181 + g 70 -8.3 -3.78775 | GCACCAGCGCGGCGA GCGGCAG TTGC CAGCCGC TTTCATCCTCGGCCA TERM 2007 1813722 - 1813689 - G 74 -9.5 -3.60525 | overlap 1813710 1813713 TCCATGCAGAGAGAA CCGTTGACCACACCG ACAA CAGTACGGCCGACGG GGTGAGATGGGCGTC TERM 2008 1813730 - 1813746 + g 87 -7.2 -5.0133 | opp_overlap 1813713 1813710, overlap 1813731 GCCGACGGGGTGAGA TGGGCG TCAGC CGCCCG TTTTTTCAGCCGATG TERM 2009 1814639 - 1814667 + g 76 -6 -4.70659 | gap 1, opp_overlap 1814641 1814643, overlap 1814642 1814643 ACATTGCCAGTTGAT AAGAGTTGCTGCC AGAG GGCGGCAAC-CTG TTTTTCAATGTCGCC TERM 2010 1814642 - 1814665 + g 77 -8.8 -3.96999 | opp_overlap 1814641 1814643, overlap 1814639 1814643 TTGCCAGTTGATAAG AGTTGCTGCC AGAG GGCGGCAACC TGTTTTTCAATGTCG TERM 2011 1814664 - 1814643 - G 70 -10.1 -3.23393 | opp_overlap 1814642 1814639 1814643, overlap 1814641 TGCCAGTTGATAAGA GTTGCTGCC AGAG GGCGGCAAC CTGTTTTTCAATGTC TERM 2012 1814643 - 1814664 + g 76 -12.3 -2.97476 | opp_overlap 1814643 1814641, overlap 1814642 1814639 TGCCAGTTGATAAGA GTTGCTGCC AGAG GGCGGCAAC CTGTTTTTCAATGTC TERM 2013 1816197 - 1816215 + g 71 -10.2 -3.14132 | CACCCGGCACCCAGT CAGGGCAG TCC CGGCCCTG TTCATCCACCACCCG TERM 2014 1816985 - 1816965 - G 70 -8.2 -3.6682 | overlap 1816977 GCTGATCCAGCGAAA CCGGAACG TAAAC CGCCCCGG CCAGCAGGACGGCCA TERM 2015 1816997 - 1816977 - G 70 -8.2 -3.77241 | overlap 1816965 AAACCGGAACGTAAA CCGCCCCG GCCAG CAGGACGG CCAGAACCGCAACAA TERM 2016 1818976 - 1819007 + r 100 -15.2 -3.14132 | opp_overlap 1818967, overlap 1818976 1818983 AACAATTGGATGCTA CCCGAAACGGGTTT ATTT ATGCCCGTTTCGGG TTGGTAACAGGCGGA TERM 2017 1818976 - 1818986 + r 87 -8.2 -4.55697 | opp_overlap 1818967, overlap 1818976 1818983 AACAATTGGATGCTA CCCG AAA CGGG TTTATTTATGCCCGT TERM 2018 1819058 - 1819028 - R 100 -21.3 -3.93658 | opp_overlap 1819032 AACAGGCGGAAAGAA CAGAGGCCCGGAT GGGGT ATCCGGGCCTCTG TCAGGGAGGAGTTTA TERM 2019 1819032 - 1819054 + r 100 -15.6 -2.87132 | opp_overlap 1819028 GGCGGAAAGAACAGA GGCCCGGATG GGG TATCCGGGCC TCTGTCAGGGAGGAG ybtA 1820050 - 1819091 - | transcriptional regulator YbtA TERM 2020 1820342 - 1820352 + G 74 -4.6 -4.85599 | GGCATTAACCAGCCT GGGG GCG CTCC TTTTTCTGGCGTGGA ybtP 1820217 - 1822019 + | permease and ATP-binding protein of yersiniabactin-iron ABC transporter TERM 2021 1822081 - 1822116 + GF 100 -13.4 -3.14881 | gap 1 TCCAGCGTTGGCAGT CAG-GCCAGGATGCTGC GAC GCAGTATGCTGGCGCTG TTGCTGGCGGCATTC TERM 2022 1822624 - 1822592 - gf 75 -8.5 -3.86346 | gap 1, overlap 1822593 1822596 CGATGCGGCGACAAA TGCAGACGCTGGGG GAAGCG CACCAGCGTCTG-A GCGGCGATATCGTTG TERM 2023 1822624 - 1822593 - gf 73 -10.1 -2.91593 | overlap 1822592 1822596 GATGCGGCGACAAAT GCAGACGCTGGGG GAAGCG CACCAGCGTCTGA GCGGCGATATCGTTG TERM 2024 1822621 - 1822596 - gf 74 -10.4 -2.70354 | overlap 1822592 1822593 GCGGCGACAAATGCA GACGCTGGGG GAAGCG CACCAGCGTC TGAGCGGCGATATCG ybtQ 1822006 - 1823808 + | inner membrane ABC-transporter YbtQ TERM 2025 1824192 - 1824218 + GF 71 -8.8 -3.25823 | gap 1 TATTTGTTCTGTTTA TGGTGGCAGGC ACGGTC GCCT-CCACCA TTGATATCGCCAGCG ybtX 1823678 - 1825081 + | putative signal transducer ybtS 1825109 - 1826413 + | salicylate synthase Irp9 TERM 2026 1826548 - 1826576 + T 74 -10.3 -2.72829 | opp_overlap 1826553, overlap 1826547 1826553 TGATAAAAGTCTATA TAGAACCACCTCC TGT GGAGGTGGTGGTA ATTTGCCAGAGTGTG TERM 2027 1826553 - 1826574 + T 73 -10.1 -2.90813 | opp_overlap 1826553, overlap 1826548 1826547 AAAGTCTATATAGAA CCACCTCCT GTGG AGGTGGTGG TAATTTGCCAGAGTG TERM 2028 1826571 - 1826553 - T 100 -14.6 -3.60814 | opp_overlap 1826553 1826548 1826547 AAAGTCTATATAGAA CCACCTCC TGT GGAGGTGG TGGTAATTTGCCAGA int2 1827869 - 1826607 - | integrase TERM 2029 1827022 - 1827034 + g 71 -5.5 -4.56597 | opp_overlap 1827022, overlap 1827017 GAGAGGGGGACGATA TGCGG CAT TCGCA TTTTTGCCCCGCGGC fimC2 1829149 - 1828409 - | pili assembly chaperone TERM 2030 1828656 - 1828670 + g 76 -5.8 -4.65895 | opp_overlap 1828655 1828658 TTCGCGATTATAACG TATTGA TTA TCAATA TTTTTAAGTGAAAAC YP_1662 1830495 - 1829146 - | hypothetical protein fimD2 1833102 - 1830511 - | fimbrial usher protein TERM 2031 1830765 - 1830776 + g 73 -5.8 -4.52781 | CCATAGGCAATTGGC TGCC ATCG GGCA TTTTAATTGTGATTA TERM 2032 1832379 - 1832353 - G 70 -2.9 -4.87273 | AAGACTGGAGAAAAA CTGGCCGGAAC TGAAG GTTTCACCCAG CGTAATTTCACTGCC fimC3 1833795 - 1833151 - | pili assembly chaperone fimA1 1834418 - 1833888 - | fimbrial protein TERM 2033 1834769 - 1834753 - R 100 -5.8 -6.23209 | opp_overlap 1834753 TGAATCAAAAAAAAA CGCCAA GAAGA CTGGCG CTTTTAATAGGGGAA baeS3 1838800 - 1834931 - | putative histidine protein kinase sensor TERM 2034 1837758 - 1837743 - GR 73 -3.2 -4.99638 | AGATCGACAGAAAAA CCGG CCATTTCT CCGG TCCGGCGGTCACGGA TERM 2035 1838699 - 1838675 - GR 81 -12.2 -2.52491 | overlap 1838674 TAGAGACGCATGAAG CTGCCCGCTA ATCAG TAGCAGGCAG TAGAGTACGGTACGC fimZ 1839407 - 1838775 - | putative two-component response regulator TERM 2036 1839051 - 1839073 + gr 70 -7.8 -3.71265 | opp_overlap 1839051 AGAGTAACCACGTAA TACGTTTTGC GCC GCAAAAAGTA TTTCACTAATATCTT aCH1 1841555 - 1840233 - | putative 4-hydroxybutyrate coenzyme A transferase maoC 1842228 - 1841578 - | putative transcriptional regulator TERM 2037 1842207 - 1842183 - GR 100 -13.6 -3.01416 | gap 1, overlap 1842173 TATCAGGCAGAGATA CCCGCTCGGGT AAGT ACCCG-GCGGG CCTGACGTGCAACAG citE2 1843012 - 1842170 - | putative citrate lyase beta chain TERM 2038 1843047 - 1843081 + H 78 -9.4 -3.61541 | overlap 1843045 CGCTTAGTCTATGGT CGCCGTTATCATTTAT CCA ATATATGATACCGGTG TGTTTAATTGCTTTT TERM 2039 1843928 - 1843950 + G 100 -16.3 -3.03635 | GCTCGCGTTGGCGTA CCGGCGAGG GGATA CCTCGCCGG TATTAAGAAACTTTG lysR8 1843089 - 1843985 + | LysR family transcriptional regulator TERM 2040 1844056 - 1844044 - T 71 -3.3 -5.03145 | overlap 1844045 CAATCGGTTAAAAAA CGCCC CAA GAGCA AAATTATTGGCTATC YP_1672 1844533 - 1844060 - | putative lipoprotein TERM 2041 1844309 - 1844287 - G 74 -2 -5.10208 | overlap 1844289 CAATGGGAATAAAAA CATTCCAC TCGCCTT GCGGAATA AACGAGAAATGTCCC YP_1673 1845118 - 1844558 - | hypothetical protein proP16 1846615 - 1845338 - | putative sugar transporter TERM 2042 1846065 - 1846024 - G 71 -5.7 -4.33274 | opp_overlap 1846051, overlap 1846052 TGTAGAGTACTAAAA GGGCGGGAAGCACACCAAT CCAG AATAATGCGCGCCACGCCC ACTCCTCTGATAGTA TERM 2043 1846595 - 1846621 + g 74 -2.5 -5.16681 | gap 2, overlap 1846600 TACAGACTGGCTTTT TAACTCTTGTGAG CAC CTCACA--AGTTA TTTTGTTATTTTTAA TERM 2044 1846600 - 1846618 + g 100 -11.8 -4.59946 | overlap 1846595 ACTGGCTTTTTAACT CTTGTGAG CAC CTCACAAG TTATTTTGTTATTTT YP_1675 1847502 - 1846633 - | putative dicarboxylic acid hydrolase TERM 2045 1848155 - 1848137 - g 75 -10.3 -3.4582 | opp_overlap 1848137, overlap 1848135 CGACGTTAGCAAATA CTGTCGG TACCG CCGACAG TGCGTTACGGCAGGC TERM 2046 1848137 - 1848155 + G 70 -11 -2.52464 | opp_overlap 1848137 1848135 CGACGTTAGCAAATA CTGTCGGT ACC GCCGACAG TGCGTTACGGCAGGC lysR9 1847614 - 1848576 + | LysR family transcriptional regulator nqrE2 1849504 - 1848881 - | Na(+)-translocating NADH-quinone reductase subunit E TERM 2047 1849109 - 1849099 - G 79 -5.4 -4.98255 | GCTGAACCATAAAAA TGGT TGC ACCA AATATTGCACAGTGG aRO81 1849805 - 1850992 + | putative aminotransferase ansP2 1852717 - 1851188 - | L-asparagine permease TERM 2048 1852508 - 1852496 - G 73 -2.7 -4.93365 | CCGGAGAATGAAAAA TGAAA AAA TTCCA CAAACCAGATAAACC TERM 2049 1853124 - 1853158 + r 73 -3.7 -4.96845 | TTATATTGCATTTTA TCTTATTTCATATGT ATCTA ACCCATGGAATAAGA TTTATTTATTTTTAT glpR4 1854209 - 1853439 - | DeoR family transcriptional regulator TERM 2050 1853859 - 1853826 - G 70 -4.7 -4.7373 | GGATTCGATCAAAAA GTTAGCAATAACAAA GTCG TTGGTTACCACTAAC AGATCATCTCTGTCC hfi2 1854762 - 1854968 + | hydroxypyruvate isomerase glsA1 1855405 - 1856427 + | glutaminase TERM 2051 1857371 - 1857358 - g 79 -8.1 -4.30416 | AGGAGCAAGGTAAAA CGCCA TTAC TGGCG CTAGACGTGATTACA TERM 2052 1858051 - 1858038 - g 72 -8.1 -3.81146 | CGGGTGAATGAAGAA GCACG GTTA CGTGC GCTGAAATTCGGTTT proP17 1856538 - 1858178 + | hypothetical protein TERM 2053 1858187 - 1858167 - f 84 -5.4 -5.25803 | overlap 1858155 1858168 AATCTGGATAAAAAA GCCAGCAA GTAAG TTGCTGGA GGTTATTGACAAAGT TERM 2054 1858186 - 1858168 - f 78 -8.9 -3.74397 | overlap 1858155 1858167 ATCTGGATAAAAAAG CCAGCAA GTAAG TTGCTGG AGGTTATTGACAAAG TERM 2055 1858262 - 1858288 + F 72 -10.1 -2.88849 | gap 1, opp_overlap 1858251, overlap 1858257 1858263 ACATCCATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCTCTGCC TERM 2056 1858263 - 1858289 + F 84 -10.1 -3.82218 | gap 1, opp_overlap 1858251, overlap 1858257 1858262 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCTCTGCCT TERM 2057 1858368 - 1858378 + F 70 -2.6 -5.07567 | GCAAGTAAGTTGCTG TTAA AAT TTAA TTTTTTGAAATATAA TERM 2058 1858449 - 1858409 - gf 70 -3.2 -4.88405 | gap 1, opp_overlap 1858413, overlap 1858413 1858432 AATGTTGAAATAAAA GTGACTGGCAGTGTGTTGC GAAA GCAGC-CACTGCCAGTTTT TTCTTTCTGGCTACC TERM 2059 1858445 - 1858413 - gf 91 -12.8 -2.88887 | gap 1, opp_overlap 1858413, overlap 1858409 1858432 TTGAAATAAAAGTGA CTGGCAGTGTGTTGC GAAA GCAGC-CACTGCCAG TTTTTTCTTTCTGGC TERM 2060 1858413 - 1858445 + GF 100 -15 -5.72622 | gap 1, opp_overlap 1858409 1858413 1858432 TTGAAATAAAAGTGA CTGGCAGTGTGTTGC GAAA GCAGC-CACTGCCAG TTTTTTCTTTCTGGC TERM 2061 1858626 - 1858641 + GF 73 -3.2 -5.01732 | opp_overlap 1858626 ATTGGTGGGGTAAAT TGCGCA TCAG TACGCA TTTTTTGAAAAAATT YP_1684 1858409 - 1858852 + | hypothetical protein TERM 2062 1859014 - 1858999 - gf 77 -4.6 -5.00616 | TCTCCGCGCAAAAAA GCTTCC AGAT GGAGGC GGCCTTTGGCGAAAT TERM 2063 1859091 - 1859080 - gf 70 -3 -4.77567 | ATGTCGATAATAAAA TCAA TTGG TTGA AAGGCGAACTAACGG TERM 2064 1859663 - 1859644 - gf 79 -7.8 -4.26461 | AGCAAGGGAAAATAA CACCGGCA ATGA TGGCGGTG CAGGATGCCTACTTT fTR12 1858758 - 1860677 + | hypothetical protein YP_1686 1860881 - 1861408 + | hypothetical protein TERM 2065 1862080 - 1862095 + G 73 -9 -3.69333 | ATTGCTCAATCTGGC TGCCAC CGTG GTGGCA TTTGGCTGGGTTATA YP_1687 1861664 - 1863118 + | hypothetical protein YP_1688 1863121 - 1864413 + | hypothetical protein TERM 2066 1865150 - 1865168 + GF 75 -8.8 -3.62046 | opp_overlap 1865150 1865147, overlap 1865151 CCAATTCGCAAAGTA TCTGCCTC TGA GGGGCAGG TTCTTGACAAGATAA TERM 2067 1865151 - 1865167 + GF 72 -10.1 -2.77013 | opp_overlap 1865150 1865147, overlap 1865150 CAATTCGCAAAGTAT CTGCCTC TGA GGGGCAG GTTCTTGACAAGATA TERM 2068 1865307 - 1865297 - gf 76 -6.8 -4.56597 | overlap 1865298 TTTGCGTTGCAAAAA GCAC TGG GTGC CAGTGGGCGTGACAT TERM 2069 1865312 - 1865298 - gf 76 -10 -3.33744 | overlap 1865297 TTGCGTTGCAAAAAG CACTGG GTG CCAGTG GGCGTGACATTATCC TERM 2070 1865490 - 1865507 + GF 75 -9.1 -3.61398 | TGCTTTCGTTGTTTG TTGCCGC TGTG GCGGCGA TTGTTCCCACCCGAC YP_1689 1864346 - 1865566 + | hypothetical protein phnL4 1865570 - 1866283 + | ABC transporter, ATP-binding protein trxA1 1866240 - 1866770 + | putative thioredoxin-family protein YP_1692 1866767 - 1867081 + | putative cytochrome precursor TERM 2071 1867909 - 1867882 - g 76 -8.6 -4.1523 | TGCAACCAGAAAGAA TCCCACATATTA TCAG TAATATGCAGGA GTGTACTTTACCCGG tehB 1867254 - 1868141 + | tellurite resistance protein TehB TERM 2072 1868636 - 1868612 - g 80 -2.8 -5.32882 | gap 1, overlap 1868613 1868614 CATCATTATAAAAAA CGTGATCGGCC TATT GGCCCACCA-G TGGAAGCGGTCTTTA pepP1 1868282 - 1869499 + | putative peptidase TERM 2073 1872204 - 1872218 + G 85 -7.8 -4.84359 | opp_overlap 1872186 1872203 TGATGCTGAACTTAG CGTGAC GCC GTCGCG TTTTTCTGACGGTAA hmsH 1870105 - 1872636 + | outer membrane protein PgaA TERM 2074 1873303 - 1873291 - g 76 -3.4 -5.09259 | GATCCCAAAACAAAA CAGT ATGAA ACTG TTGAAGCCTTTAAGC hmsF 1872649 - 1874670 + | haemin storage system, HmsF protein YP_1697 1874660 - 1875994 + | N-glycosyltransferase PgaC TERM 2075 1876141 - 1876166 + G 77 -10.5 -3.54459 | CATATGGGGCCGATA CCGTTGAGGAT TTAT ATTCTCAGCGG TTTGACGACGATTGC hmsS 1875991 - 1876458 + | haemin storage system, HmsS protein rimL 1876792 - 1877691 + | putative acetyltransferase TERM 2076 1878175 - 1878165 - T 74 -4 -5.07652 | GCTGTTAAAACAAAA TCAA AGA TTGA CTCGAGCCTGTCCAT TERM 2077 1878240 - 1878219 - T 84 -10.1 -3.74693 | TGCCACCGTATTAAA GGTGATCGC TCAG GCGGTCACC GAACTCGATAATAAA YP_1701 1879422 - 1878214 - | transposase for the IS285 insertion element phoH2 1879791 - 1880579 + | hypothetical protein TERM 2078 1880638 - 1880662 + T 100 -16.5 -3.92324 | opp_overlap 1880638 AGAATACACAAAAAA GGGCAAGCGTT AAC AGCGCTTGCCC TTTGCTATTCAGACG TERM 2079 1880662 - 1880638 - T 100 -14.3 -5.48787 | opp_overlap 1880638 AGAATACACAAAAAA GGGCAAGCGTT AAC AGCGCTTGCCC TTTGCTATTCAGACG chaA 1881782 - 1880682 - | calcium/sodium:proton antiporter TERM 2080 1881833 - 1881819 - R 75 -8.5 -3.74693 | CTTTACTGTATTAAA CGGGC ATTAG GCCCG GTTAACGATAAATAA narX 1884136 - 1882331 - | nitrate/nitrite sensor protein NarX TERM 2081 1885629 - 1885591 - g 71 -5.3 -4.57837 | opp_overlap 1885600 1885602, overlap 1885599 1885600 1885602 ACACTTCCCCAAAAA CATCAAAATCAGCCACC CCGCT GGCGGCTATTTCTTATG GTTAGAATTGGAGCC aRO82 1884395 - 1885843 + | GntR family regulatory protein YP_1706 1886085 - 1886282 + | hypothetical protein argD 1886480 - 1887724 + | bifunctional succinylornithine transaminase/acetylornithine transaminase TERM 2082 1887725 - 1887713 - f 74 -6.3 -4.57073 | opp_overlap 1887712 1887713, overlap 1887715 CAGGTTTGTCAAAAA GTTAC GTC GTAAC GTTTATGCCGTAGGC astA 1887754 - 1888806 + | arginine succinyltransferase TERM 2083 1888977 - 1888990 + G 80 -9.5 -4.09685 | ACTCTGGCCTGCCAT GCCGC AAGA GCGGC TTTTCCGGCATGGGC TERM 2084 1889216 - 1889206 - g 70 -8.2 -3.70902 | CCGGCCATAGCCAAA CCCC AAT GGGG GACAGCATGTCAGTG astD 1888803 - 1890320 + | succinylglutamic semialdehyde dehydrogenase TERM 2085 1890454 - 1890478 + G 83 -12.9 -3.63515 | opp_overlap 1890442 AAATCGTACTTCCAA CCCTCGTTTGG CAG CCAAACAAGGG TTATTGAAGATGAAA TERM 2086 1890532 - 1890521 - g 71 -7.2 -4.07877 | TTAGGCTACAAACAA GGGG TTCT CCCC CCTCAGGAGCGGCCG astB 1890344 - 1891687 + | succinylarginine dihydrolase YP_1711 1891745 - 1892740 + | succinylglutamate desuccinylase ompC3 1893468 - 1894550 + | Outer membrane protein (porin) TERM 2087 1894739 - 1894707 - T 70 -5.6 -4.3207 | gap 1, opp_overlap 1894715, overlap 1894709 1894715 ATAGAAAGATAGAAA GATAGAAAGGCGGGG GAAA CCCCGTCTTTTTA-C TGTGAGCTGTAAACC TERM 2088 1894738 - 1894709 - T 81 -9.3 -3.74227 | opp_overlap 1894715, overlap 1894707 1894715 AGAAAGATAGAAAGA TAGAAAGGCGGGG GAAA CCCCGTCTTTTTA CTGTGAGCTGTAAAC TERM 2089 1894732 - 1894715 - T 82 -8.3 -4.3207 | opp_overlap 1894715, overlap 1894709 1894707 ATAGAAAGATAGAAA GGCGGGG GAAA CCCCGTC TTTTTACTGTGAGCT TERM 2090 1894715 - 1894732 + T 100 -10.5 -4.80882 | opp_overlap 1894709 1894707 1894715 ATAGAAAGATAGAAA GGCGGGG GAAA CCCCGTC TTTTTACTGTGAGCT hutG 1895760 - 1894867 - | putative N-formylglutamate amidohydrolase hutI 1896890 - 1895670 - | imidazolonepropionase TERM 2091 1897045 - 1897023 - R 70 -7.1 -3.9009 | AACCTAGCCTATAAA TTCACTATC AGCAA GATAGCGAA TTCACAATTGCGTAA dnaC_14 1898287 - 1897505 - | transposase/IS protein TERM 2092 1898203 - 1898217 + g 77 -11.4 -3.3506 | overlap 1898216 CTGCCTGTTGTGACA GCGCAG GCG CTGCGC TTATAAGGCTTTCCA YP_1717 1899306 - 1898284 - | transposase for insertion sequence IS100 TERM 2093 1899328 - 1899310 - H 100 -13.2 -4.01078 | AAAAGTGACCATAAA CTCTCCTG AAT CAGGAGAG CAGATTACCCCCTGG YP_1718 1899713 - 1900102 + | hypothetical protein YP_1719 1900451 - 1900212 - | hypothetical protein YP_1720 1901648 - 1900659 - | hypothetical protein fimD3 1904301 - 1901854 - | outer membrane usher protein fimC4 1905207 - 1904455 - | putative chaperone protein YP_1723 1905822 - 1905238 - | hypothetical protein YP_1724 1906358 - 1905816 - | hypothetical protein YP_1725 1906906 - 1906352 - | hypothetical protein TERM 2094 1906678 - 1906662 - G 74 -6.5 -4.29304 | opp_overlap 1906667 1906668, overlap 1906658 GCACTACAATACAAA CTGAGAG TCC CGCTCAG TGTGCCACTGAATGC pqiB2 1910043 - 1907386 - | hypothetical protein TERM 2095 1908126 - 1908140 + gr 77 -8.5 -3.98282 | overlap 1908127 TAATCTGGCTACCCA CGGCC CGTGC GGCCG TTTCATTACTATACA TERM 2096 1909558 - 1909577 + gr 72 -10 -2.76671 | opp_overlap 1909558, overlap 1909557 GAGATGAATCATTAA TTCGCCTG TATT CAGGCGGA ATTTAGGCTGAGTAT pqiA2 1911358 - 1910006 - | hypothetical protein TERM 2097 1911080 - 1911065 - GH 71 -9 -3.39449 | CGGTATTAACAGCAA CATGGC GCAA GCCATG GCGGTCAACCGGGTC TERM 2098 1911394 - 1911413 + H 90 -10.8 -3.91642 | opp_overlap 1911394, overlap 1911404 AACATTACAGAGGAA TACCCTTG TCGC CAAGGGTA TTTAATGATTATTTT TERM 2099 1911413 - 1911394 - H 81 -10.8 -3.34936 | opp_overlap 1911394 1911404 AACATTACAGAGGAA TACCCTTG TCGC CAAGGGTA TTTAATGATTATTTT TERM 2100 1911745 - 1911733 - g 73 -6.2 -4.4891 | CGCAGTAGCAGAAAA CCGC GTTCA GCGG GTAGGTAATGTGCAT YP_1728 1911485 - 1911982 + | GAF domain-containing protein TERM 2101 1912010 - 1912029 + F 86 -12.2 -3.1552 | overlap 1912008 GTGGCAATTGCTGAT GGCGTCAT TATA ATGACGCC TGTTCATGCCTGCGC TERM 2102 1912134 - 1912144 + G 79 -8.2 -4.41348 | AGCCTTTTTGGCCGA GCGG TTC CCGC TTTGTTTCACCGCCG TERM 2103 1912256 - 1912235 - g 73 -10.9 -3.29147 | GGGAAGAGAATTTAA GCAAAACGC AATT GCGTTCTGC GCTGCGTCTCTACAC TERM 2104 1912534 - 1912507 - g 76 -2.7 -5.08824 | overlap 1912508 CCGGCAGGTAAAAAA CCTGCA-CCGCGT CGTG AAGCGGGTGC-GG CTCCGGAAAACCGCA proQ 1912078 - 1912791 + | putative solute/DNA competence effector prc 1912811 - 1914883 + | carboxy-terminal protease TERM 2105 1914905 - 1914926 + F 100 -8.7 -6.31682 | opp_overlap 1914905 AAATAATATGAAGAA TCCGGGTCT TATT GGACTCGGA TTTTTTTTTGCTTTT htpX1 1915338 - 1916219 + | heat shock protein HtpX TERM 2106 1916297 - 1916325 + F 100 -13.2 -5.44119 | ATAATATGGTCTTCA CACCCTGTGAGC GGTAA GCTGACAGGGTG TTTTTTTACCGTGGC TERM 2107 1916486 - 1916501 + F 100 -4.8 -5.9362 | AAATCTGTGACTTAC TTCATT GAAA AATGAA TTTTTTTGTCTTTTC fimA2 1916877 - 1917419 + | fimbrial protein TERM 2108 1917540 - 1917522 - f 100 -10.3 -4.386 | opp_overlap 1917521 1917520 CAATCCGGCATAAAA TGGGAGC TTAGT GCTCCCA GCTTTATAAGTTCGA ecpD1 1917572 - 1918351 + | putative chaperone protein TERM 2109 1918349 - 1918400 + F 72 -10 -2.84999 | opp_overlap 1918349 1918364, overlap 1918364 CAAAAACTGACCCAA TAAAACTATAAAAAATACAAATTA AGGG TAATTTGTATTTTTTGCACTTTTA TATACTGCATTTAAT TERM 2110 1918400 - 1918349 - f 74 -10 -3.14261 | opp_overlap 1918349 1918364, overlap 1918364 CAAAAACTGACCCAA TAAAACTATAAAAAATACAAATTA AGGG TAATTTGTATTTTTTGCACTTTTA TATACTGCATTTAAT TERM 2111 1918385 - 1918364 - f 95 -7.5 -5.4588 | opp_overlap 1918364 1918349, overlap 1918349 TAAAACTATAAAAAA TACAAATTA AGGG TAATTTGTA TTTTTTGCACTTTTA TERM 2112 1918364 - 1918385 + F 90 -7.5 -5.15117 | opp_overlap 1918349 1918364, overlap 1918349 TAAAACTATAAAAAA TACAAATTA AGGG TAATTTGTA TTTTTTGCACTTTTA TERM 2113 1920729 - 1920719 - g 73 -5.4 -4.68994 | opp_overlap 1920722, overlap 1920721 AGTACTAGCCAAAAA GTTG CGC CAAC CGCAGGTGCTGTTGC fimD4 1918433 - 1921045 + | putative outer membrane usher protein fimA3 1921036 - 1922205 + | putative fimbrial componenet fimC5 1922202 - 1923005 + | putative chaperone protein proP18 1924426 - 1923059 - | putative transport protein TERM 2114 1924010 - 1923985 - G 84 -11.3 -3.81691 | overlap 1924005 AAGACACAGCAACAA TCAAGGTATTG ATAC CAATACCTCGA CCAAGTTGGGCTCGA ogl 1924753 - 1925919 + | oligogalacturonate lyase TERM 2115 1925932 - 1925958 + F 100 -12.4 -3.88498 | TAGCCGAGTTTTCCA TTAGCCTCTCTC TTA GAAAGAGGCTAA TTTGCTGTCTGCAAG kdgR 1926106 - 1926897 + | IclR family transcriptional regulator TERM 2116 1927020 - 1927000 - f 82 -6.8 -4.82901 | opp_overlap 1927000 CTCTTTTTATAAAAA CAGCTCCT CTGGC AGGGGCTG TTTTTCATCACATGA TERM 2117 1927000 - 1927020 + F 100 -9 -4.7373 | opp_overlap 1927000 CTCTTTTTATAAAAA CAGCTCCT CTGGC AGGGGCTG TTTTTCATCACATGA ampD2 1927282 - 1928133 + | N-acetylmuramoyl-L-alanine amidase YP_1741 1929745 - 1928348 - | putative transport protein YP_1742 1930491 - 1929943 - | hypothetical protein TERM 2118 1930133 - 1930094 - G 82 -11.2 -3.76641 | opp_overlap 1930091 AGCGGAATACTGAAA CGCCAGCGGCAGGGCCAC AATA GCGGCACACCGGCTGGCG TAATCATATCGGCCA TERM 2119 1930903 - 1930874 - R 100 -13.1 -5.53288 | gap 1, opp_overlap 1930881 1930881 GCTAAGCTAAAAAAA GGGAAAAG-TGACT GGG AGTCAACTTTTCCC CAAAATAATGCAGAG YP_1743 1931681 - 1930971 - | hypothetical protein TERM 2120 1931915 - 1931952 + r 71 -10 -2.57192 | opp_overlap 1931915 1931920, overlap 1931920 TTTTATTTGATTAAA CAAAATAACCCCACCA AATAAA TGGCAGGGTTATTTTG TGACTTAAGTTAAAT TERM 2121 1931952 - 1931915 - R 100 -14.4 -3.74693 | opp_overlap 1931915 1931920, overlap 1931920 TTTTATTTGATTAAA CAAAATAACCCCACCA AATAAA TGGCAGGGTTATTTTG TGACTTAAGTTAAAT TERM 2122 1931947 - 1931920 - R 100 -8.5 -4.93877 | opp_overlap 1931915 1931920, overlap 1931915 TTTGATTAAACAAAA TAACCCCACCA AATAAA TGGCAGGGTTA TTTTGTGACTTAAGT togB 1933271 - 1931979 - | putative sugar-binding protein TERM 2123 1932732 - 1932743 + g 84 -4.4 -5.30616 | opp_overlap 1932724 1932732 TACAACAGGGTAATA TTGG TCAC CCAA TTTTTCTTTAAATAC togA 1934414 - 1933287 - | putative sugar ABC transporter malG3 1935348 - 1934428 - | putative sugar ABC transporter (permease) togM 1936231 - 1935341 - | putative ABC sugar transporter (permease) pelW 1937939 - 1936272 - | exopolygalacturonate lyase TERM 2124 1938073 - 1938089 + r 91 -3.7 -5.83211 | AAAGTGTGATCGAAG TCGGAAC GTT GTTTTGA TTTTTTATTTTGGTG TERM 2125 1938187 - 1938168 - R 100 -12.2 -5.74288 | opp_overlap 1938165 ATAAATAATAAAAAA GGCACAAC CAAA GTTGTGCC TGATGCGTTTTTGAG kduD 1939081 - 1938275 - | 2-deoxy-D-gluconate 3-dehydrogenase TERM 2126 1938883 - 1938863 - G 70 -4.6 -4.59773 | opp_overlap 1938863 1938871 GGTCAGGCTGAAAAA GCGACGGC CCAGT GCAGTCAC TTGTTCGATAGTCTC TERM 2127 1939096 - 1939112 + r 70 -7.2 -3.77196 | opp_overlap 1939096 TTATTGGAGGTGAAA GCCGCC GTAAA GGTGGC TTTAATAGGTGATAC kduI 1939964 - 1939128 - | 5-keto-4-deoxyuronate isomerase TERM 2128 1941880 - 1941901 + G 77 -10.1 -3.74693 | TTTATTATCGAGTTC GGTGACCGC CTGA GCGATCACC TTTAATACGGTGGCA YP_1752 1940698 - 1941906 + | transposase for the IS285 insertion element TERM 2129 1942107 - 1942089 - f 70 -7.3 -3.85698 | CCCTGTGTTTACAAA CGGCGAG TCACG CACGCCG TATCCCGGTATTTTA TERM 2130 1942764 - 1942745 - g 70 -2.8 -4.87665 | CCCCATTGATAAAAA TGGTCAAC TGGT GCTGAACA ACCGAGCGTAATACC YP_1753 1942209 - 1942775 + | hypothetical protein mfd 1946460 - 1943014 - | transcription-repair coupling factor TERM 2131 1944485 - 1944507 + g 71 -6.3 -4.34486 | gap 1, overlap 1944484 1944481 TGTTGAGCCAGCAGG GTGGTGG-GT ACCA ACACCGCCAC TTGTTTATTATTGGT TERM 2132 1946785 - 1946801 + G 90 -10.1 -4.5123 | TGCGTGGGCGTGCTT CTGACCG CTT CGGTCGG TTTGTTTCGTGGCTT TERM 2133 1947204 - 1947220 + G 77 -10.1 -3.78775 | opp_overlap 1947204 CAGCTCGGGGTTAAA CGCGGTG AAA CACTGCG TTTGATGGTACCGAG YP_1755 1946730 - 1947929 + | outer membrane-specific lipoprotein transporter subunit LolC lolD 1947926 - 1948630 + | lipoprotein transporter ATP-binding subunit TERM 2134 1949192 - 1949206 + G 70 -4.2 -4.62783 | CTAAGCGCATCCGTT TACAGG TTG CCGGTA TTTTTCAACTGAGTG YP_1757 1948627 - 1949877 + | outer membrane-specific lipoprotein transporter subunit LolE TERM 2135 1950263 - 1950295 + G 70 -9.8 -3.2327 | opp_overlap 1950266, overlap 1950260 1950266 1950283 AGTTTCGCACTTACC CAACGGTGCTGGGG CTTAT TCTCGGCACCGGTG TTGGTGGTGGGTTAA nagC4 1949896 - 1950666 + | N-acetyl-D-glucosamine kinase nagC5 1950644 - 1950811 + | transcriptional regulator TERM 2136 1950823 - 1950809 - f 85 -7.2 -4.83615 | CATTTGGCAGAAAAA TAATCG TCA CGATTA ATAACAAGACAGATA cobB 1950860 - 1951696 + | NAD-dependent deacetylase TERM 2137 1952439 - 1952429 - g 71 -6.8 -4.14739 | CGACTGATGGTAAAA CCCT GTT AGGG GCGGATGATAAAGCG pepT 1951996 - 1953261 + | peptidase T TERM 2138 1953297 - 1953281 - T 93 -10.8 -4.1897 | opp_overlap 1953281 AACGATAGAGAGAAA CGCCCC GAAAA GGGGCG TTTGAGGTTATTGAC TERM 2139 1953281 - 1953297 + T 84 -10.8 -3.72051 | opp_overlap 1953281 AACGATAGAGAGAAA CGCCCC GAAAA GGGGCG TTTGAGGTTATTGAC YP_1762 1954669 - 1953494 - | hypothetical protein phoQ 1956153 - 1954699 - | sensor protein PhoQ TERM 2140 1955308 - 1955321 + g 76 -8.1 -4.13014 | TAGTGTGGTTTGTAG CACCG CCAG CGGTG TTTTAAGGCTGTGAG phoP 1956830 - 1956159 - | DNA-binding transcriptional regulator PhoP YP_1765 1957664 - 1957041 - | putative lipoprotein TERM 2141 1957498 - 1957518 + g 74 -6.9 -4.42386 | ATCCCACCCATATTT TTATTGCCA ATA TGGCTATAA TTTTGTCGGTCAAAC TERM 2142 1957840 - 1957795 - R 100 -13 -3.34192 | gap 1, opp_overlap 1957798 1957800, overlap 1957798 AAGGGGGGGAAGGAA TAATACAGATGGCGTTAGCTT TTACC AAACTAA-GCCACCTGTATTA GATAAAGAATATTAC TERM 2143 1957837 - 1957798 - R 86 -10.3 -3.81146 | gap 1, opp_overlap 1957798 1957800, overlap 1957795 GGGGGGAAGGAATAA TACAGATGGCGTTAGCTT TTACC AAACTAA-GCCACCTGTA TTAGATAAAGAATAT purB 1959231 - 1957852 - | adenylosuccinate lyase YP_1767 1959909 - 1959283 - | hypothetical protein trmU 1961082 - 1959967 - | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TERM 2144 1960648 - 1960664 + g 71 -6.5 -4.13945 | opp_overlap 1960647 TTTATTTCCATCAAG GCCGC GCAGTAG GCGGC TTTTACCATCAACAT TERM 2145 1961032 - 1961058 + g 82 -3.5 -5.30686 | opp_overlap 1961029, overlap 1961034 GGAAACGGAAGAGTC GACACCGCCGG ACATG CCGACGATGAC TTTTTTCTGGCTATT mutT3 1961715 - 1961269 - | hypothetical protein TERM 2146 1961611 - 1961628 + g 70 -2.6 -5.00339 | overlap 1961612 GGCTTCCAGATGACC GGCTGG CTGGTT CCAGCG TTTTTCATTGTTGAT rsuA2 1962334 - 1961708 - | putative pseudouridine synthase TERM 2147 1962262 - 1962244 - G 74 -9.5 -3.57389 | overlap 1962242 TATTGAATAACAATA CCCGCCG TGGCG CAGCGGG GGGGGACTGCCTGGC TERM 2148 1962391 - 1962369 - H 83 -12 -2.80113 | GATTAGCGCATTATA CCCCAATCCG TTT CGGATTGGCG CGGAACGAATATTCA icdA 1962414 - 1963718 + | isocitrate dehydrogenase TERM 2149 1963730 - 1963771 + T 100 -14.7 -3.54 | opp_overlap 1963737, overlap 1963731 1963733 1963737 GTAGTTCTGACGTAT CTATAAACTTCACGAGGGC TTAT GCTTTCGTGAAGTTTATAC TATTTATGGCGTGCT TERM 2150 1963731 - 1963770 + T 100 -18.2 -2.71918 | opp_overlap 1963737, overlap 1963730 1963733 1963737 TAGTTCTGACGTATC TATAAACTTCACGAGGGC TTAT GCTTTCGTGAAGTTTATA CTATTTATGGCGTGC TERM 2151 1963733 - 1963768 + T 100 -16.4 -2.90065 | opp_overlap 1963737, overlap 1963731 1963730 1963737 GTTCTGACGTATCTA TAAACTTCACGAGGGC TTAT GCTTTCGTGAAGTTTA TACTATTTATGGCGT TERM 2152 1963737 - 1963764 + T 100 -12.8 -4.12037 | opp_overlap 1963737, overlap 1963733 1963731 1963730 TGACGTATCTATAAA CTTCACGAGGGC TTAT GCTTTCGTGAAG TTTATACTATTTATG TERM 2153 1963764 - 1963737 - T 77 -8.4 -3.92869 | opp_overlap 1963737 1963733 1963731 1963730 TGACGTATCTATAAA CTTCACGAGGGC TTAT GCTTTCGTGAAG TTTATACTATTTATG purR4 1964907 - 1963864 - | LacI family sucrose operon repressor TERM 2154 1964633 - 1964623 - G 79 -6.8 -4.72986 | TAGGTTCACTAAAAA GCTG TTC CAGC CAAACTCTCGGGCAG TERM 2155 1965129 - 1965110 - R 79 -7.8 -4.3129 | overlap 1965111 CAGGCAGCAGTAAAA CGCCCTCA ATAT TGAGGGCT GAATGTATTGAGGAA TERM 2156 1965128 - 1965111 - R 84 -11.3 -3.18292 | overlap 1965110 AGGCAGCAGTAAAAC GCCCTCA ATAT TGAGGGC TGAATGTATTGAGGA YP_1773 1965443 - 1965183 - | hypothetical protein aer 1967200 - 1965563 - | putative methyl-accepting chemotaxis protein YP_1775 1968920 - 1968063 - | hypothetical protein YP_1776 1968951 - 1969463 + | transcriptional regulator YP_1777 1969521 - 1969694 + | hypothetical protein TERM 2157 1970712 - 1970694 - g 82 -8.1 -4.51847 | opp_overlap 1970699, overlap 1970685 AAAGAAGGGACAAAA GTGACCC TCAGT GGGCCAC TGGCGTTATCATCGA appA 1969995 - 1971320 + | phosphoanhydride phosphorylase TERM 2158 1971497 - 1971462 - T 91 -5.5 -5.60993 | gap 2 GCTGTCATAAAAAAA GCCGGG--TGGCCCA ATAAAAGG TAGGCCAGACCCGGC AAATAAATACCGGCA YP_1779 1971837 - 1971622 - | hypothetical protein YP_1780 1973051 - 1972128 - | hypothetical protein lrp3 1973568 - 1973119 - | transcription regulator AsnC TERM 2159 1973281 - 1973270 - G 70 -2.2 -5.03747 | AAACGGCTCAAAAAA CAGT CATC ACCG GTTATTTTGTCACAC YP_1782 1973993 - 1973841 - | hypothetical protein YP_1783 1974614 - 1974081 - | hypothetical protein TERM 2160 1974752 - 1974772 + r 76 -9.7 -3.37879 | opp_overlap 1974769, overlap 1974770 ACCCTTTATACCCGT CGCCCTTCA AGA TGAAGGGGG TTAGTTGCCCTTGCT qor2 1975943 - 1974897 - | Zinc-binding dehydrogenase TERM 2161 1976044 - 1976032 - R 71 -2 -5.15969 | GTGTAATGGAAAAAA TTCA TAGAG TGAA CGTGCGTAACTATCA TERM 2162 1976128 - 1976110 - R 100 -11 -5.9003 | opp_overlap 1976109 AAAGGAACAAAAAAA GCGCCCAT AGG ATGAGCGC GTAAATTTTGCAAAG lacZ 1979496 - 1976314 - | beta-D-galactosidase TERM 2163 1977772 - 1977754 - G 89 -10.2 -4.42806 | CCAGTCCCAAATAAA CCCGCCCT GTA AGCGCGGG TACTGACGAAATGCC TERM 2164 1979701 - 1979686 - H 70 -2.5 -5.07567 | TGAGAGGCCAAAAAA CGCAG GGCGCA CTACG AAGAGATAACAATTT cspC3 1980037 - 1980249 + | cold shock protein TERM 2165 1980289 - 1980276 - f 100 -9.5 -5.67063 | opp_overlap 1980276 CTGATTATAAAAAAA CCCGC TAAG GCGGG TTTTTTACTGTCTGT TERM 2166 1980276 - 1980289 + F 100 -9.5 -5.25893 | opp_overlap 1980276 CTGATTATAAAAAAA CCCGC TAAG GCGGG TTTTTTACTGTCTGT dsrB 1980464 - 1980655 + | hypothetical protein TERM 2167 1980735 - 1980706 - f 100 -8 -5.252 | gap 2, opp_overlap 1980706 TATTGCGATAAAAAA CCGGAGG--AAGGT TCAT ACCTTATCCTCCGG TTTTTGCTTTTTATC TERM 2168 1980706 - 1980735 + F 95 -8 -5.2197 | gap 2, opp_overlap 1980706 TATTGCGATAAAAAA CCGGAGG--AAGGT TCAT ACCTTATCCTCCGG TTTTTGCTTTTTATC TERM 2169 1981558 - 1981587 + F 76 -7.9 -4.1822 | gap 1, overlap 1981559 CATTCTGTTTCACGG TTGCGGTCAGT-TG CTC CATGCTGGCCGCAG TTTGTTCAAGTGAAG TERM 2170 1981559 - 1981586 + F 72 -9.2 -3.10611 | gap 1, overlap 1981558 ATTCTGTTTCACGGT TGCGGTCAGT-TG CTC CATGCTGGCCGCA GTTTGTTCAAGTGAA TERM 2171 1982221 - 1982234 + F 77 -4.5 -5.055 | GCTGTGACTGAGCTA TGCGG CCTT CTGCA TTTTTTAGGCCTTGC YP_1789 1983176 - 1983346 + | hypothetical protein mgtC 1983686 - 1984396 + | Mg(2+) transport ATPase protein C TERM 2172 1985839 - 1985820 - g 71 -7.8 -4.11484 | opp_overlap 1985838, overlap 1985821 TCTAATCTGGCAAAA GGGGCCAT CGCG ATGGCCCG GCGTAAAGTCGTGGT TERM 2173 1985838 - 1985821 - g 74 -11.3 -3.06569 | overlap 1985820 CTAATCTGGCAAAAG GGGCCAT CGCG ATGGCCC GGCGTAAAGTCGTGG mgtB 1984797 - 1987496 + | Mg(2+) transport ATPase protein B TERM 2174 1987530 - 1987570 + F 71 -9.1 -3.36569 | opp_overlap 1987534 1987536, overlap 1987528 1987532 1987534 AGCCTGGTTGATCTC AAGACACTATTCCGGGG GTGGCTG CCCTGGAATAGTGTGTG TATTTAAAAGATTAG TERM 2175 1987532 - 1987568 + F 86 -11.7 -3.24976 | opp_overlap 1987534 1987536, overlap 1987530 1987528 1987534 CCTGGTTGATCTCAA GACACTATTCCGGGG GTGGCTG CCCTGGAATAGTGTG TGTATTTAAAAGATT TERM 2176 1987534 - 1987566 + F 100 -14.3 -3.18571 | opp_overlap 1987534 1987536, overlap 1987532 1987530 1987528 TGGTTGATCTCAAGA CACTATTCCGGGG GTGGCTG CCCTGGAATAGTG TGTGTATTTAAAAGA TERM 2177 1987566 - 1987534 - f 86 -12.1 -3.05844 | opp_overlap 1987534 1987532 1987530 1987528, overlap 1987536 TGGTTGATCTCAAGA CACTATTCCGGGG GTGGCTG CCCTGGAATAGTG TGTGTATTTAAAAGA TERM 2178 1988622 - 1988646 + F 78 -7.3 -4.45168 | GAAGGATCCCTGGTT TTGAGTGATAA ATT TTGTCATTCAA TTTATGTTTTAAAAC flhC 1989036 - 1989620 + | transcriptional activator FlhC TERM 2179 1990548 - 1990534 - g 79 -8.6 -4.40993 | CAGAAACGACCAAAA TGATGC AAT GCATCA AAGTGACTCTGCTGT motA1 1989825 - 1990712 + | flagellar motor protein MotA TERM 2180 1991286 - 1991264 - g 73 -11.4 -3.00476 | overlap 1991269 ATCCTGAATGACATA CCGAATAAAC TCA GTTTATCCGG TCACACCGATGACCT TERM 2181 1991589 - 1991567 - g 70 -2.6 -5.03994 | opp_overlap 1991572, overlap 1991568 CTGGATATAGAAAAA GCAACCGGCT TAA AGCAGATTGA TACTCACGGGACGGT motB 1990709 - 1992010 + | flagellar motor protein MotB TERM 2182 1992040 - 1992053 + G 76 -3.1 -5.14563 | GCATGGATATTACCG CGTTT TATC AGACG TTTTTTGATGAAGCA TERM 2183 1992563 - 1992543 - g 71 -11.1 -2.7535 | opp_overlap 1992540 1992536, overlap 1992540 GCTGGCAACACATCA CCCGCGTTG CTT CAAGGCGGG ATGCGTATTCGTTTG TERM 2184 1993881 - 1993917 + G 74 -10.1 -3.55084 | overlap 1993865 1993879 CGCGTGCTGCAAGTT CGCGGTGAATTTCTACC ATT GGTTGAATTGTACCGCG TCTTTGATGTTAAAA cheA 1992021 - 1994192 + | chemotaxis protein CheA TERM 2185 1994812 - 1994802 - g 79 -6.8 -4.70659 | GTTGATATCGAAAAA CTGC TGA GCAG TGAAGAGATGTCGTT cheW 1994355 - 1994852 + | purine-binding chemotaxis protein TERM 2186 1995076 - 1995106 + T 81 -9.6 -3.87075 | opp_overlap 1995075 1995074 1995076 1995079, overlap 1995079 CTGAAATAAAGAACT GAACCGCCATTGCA TAT TGCTCGGGCGGTTC TTTATGACAAGTCAT proP19 1996379 - 1995144 - | hypothetical protein TERM 2187 1995937 - 1995927 - G 70 -2.4 -5.05606 | CTGAACAAAAACAAA CAGG GCA CCAG AAGCGATAAGTACAT tdcF1 1996799 - 1996392 - | YjgF-family lipoprotein sgaU 1997752 - 1996766 - | hypothetical protein TERM 2188 1997472 - 1997452 - GH 93 -11.9 -3.62597 | opp_overlap 1997462 1997466 TGTAGGTTCGAATAA CATCCGCAC CCA GTGCAGATG CAAATTGCACGGCTT YP_1801 1997930 - 1998607 + | putative DNA-binding protein TERM 2189 1998685 - 1998665 - f 89 -12.7 -2.73875 | overlap 1998662 GTTGGCCGAATAGTA TCGCCATAA ATT TTATGGCGA AGTAACATTAATATG TERM 2190 1999990 - 2000011 + G 77 -10.1 -3.74693 | TTTATTATCGAGTTC GGTGACCGC CTGA GCGATCACC TTTAATACGGTGGCA YP_1802 1998808 - 2000016 + | transposase for the IS285 insertion element TERM 2191 2002987 - 2002967 - g 70 -11.1 -2.50816 | overlap 2002966 CGGTTAGTGATCAAC GGCGATGCC ACC GGCACCACC TCGGTCCGGGTGAAC YP_1803 2000405 - 2004211 + | outer membrane protein TERM 2192 2006532 - 2006557 + G 73 -5.4 -4.70319 | gap 1 TTTCAGCCAGGTTAC GCTAACCCTGC TGCTC GC-GGGTCAGC TTTTAGTTTTGGTAC YP_1804 2004739 - 2007615 + | putative integral membrane protein TERM 2193 2008207 - 2008197 - g 76 -6.8 -4.55689 | ACTATTCACAGAAAA GGTG CTA CACC GGCCGATATCTTCCG YP_1805 2007684 - 2008385 + | hypothetical protein TERM 2194 2008649 - 2008667 + G 70 -8.9 -3.51158 | GCGTATGAAAGTGGT TACCAGC CTGCT GCTGGTA TTAGTATTATTTGGT TERM 2195 2009026 - 2008998 - g 70 -2.5 -5.03145 | opp_overlap 2009007, overlap 2008999 GAAGGCGCCAAAAAA TTAAAACAGTCCT ACG AGGAATATTTTAG TGCCTTAACCGAACT TERM 2196 2009603 - 2009591 - g 71 -6.9 -4.16251 | overlap 2009582 ACAGAACGCTGAAAA CGCCC GTC AGGCG AGTCAATTAGCATTG cheD1 2008626 - 2010299 + | methyl-accepting chemotaxis protein tap 2010483 - 2012093 + | methyl-accepting chemotaxis protein IV, peptide sensor receptor TERM 2197 2012180 - 2012148 - f 76 -10.7 -2.60808 | overlap 2012144 AGGAGTGACAATCGA TCATCACTCGTAACG GGT CATCACGAGTAACGA CAAGTGGCTGTAAAG TERM 2198 2012990 - 2013014 + G 73 -6.4 -4.51799 | opp_overlap 2012991, overlap 2012991 TCTATTTTGATAAAG AGACGCAGGA ACGCA TTCTGCGTCG TTTTGTACCTTTGCT TERM 2199 2012991 - 2013013 + G 70 -9.9 -3.29995 | opp_overlap 2012991, overlap 2012990 CTATTTTGATAAAGA GACGCAGGA ACGCA TTCTGCGTC GTTTTGTACCTTTGC cheR 2012251 - 2013138 + | chemotaxis methyltransferase CheR TERM 2200 2013900 - 2013921 + G 71 -6.6 -4.25859 | gap 1, overlap 2013892 GGACCCGCGGTTAAT CGTC-ACCG TCCTT CGGTTGACG TTCTTTTCCGTTCGG cheB 2013135 - 2014187 + | chemotaxis-specific methylesterase cheY 2014282 - 2014677 + | chemotaxis regulatory protein CheY cheZ 2014687 - 2015331 + | chemotaxis regulator CheZ TERM 2201 2015347 - 2015382 + F 74 -4.6 -4.81685 | overlap 2015353 TGACGTTATCGATAG CGCTAACCGGTAGGGA ATTG TCCCTGCCGGTTTATA TTTTTCATACTTCAT TERM 2202 2015353 - 2015376 + F 100 -14.6 -4.58297 | overlap 2015347 TATCGATAGCGCTAA CCGGTAGGGA ATTG TCCCTGCCGG TTTATATTTTTCATA TERM 2203 2015821 - 2015835 + F 71 -10 -2.63257 | overlap 2015815 AAATATTGATGCGGC GCACAC ATT GTGTGC TGGATTATATACAGT ampD3 2015902 - 2016666 + | N-acetylmuramoyl-L-alanine amidase TERM 2204 2017320 - 2017334 + F 72 -7.8 -3.85817 | GGAAAAGGTGGGATC GCTGGG AAG CCTAGC TTTATCGCCACCCCT TERM 2205 2017522 - 2017536 + F 84 -11.4 -3.1506 | CGATTTCATCGACCT CCACCG ATG CGGTGG TTGGTAGCCAGCTTT TERM 2206 2017624 - 2017601 - f 72 -9.6 -3.09933 | gap 1 CGCCAACTCAGTGAA CCCGCAAG-AC TCC GTGCCTGCGGG TCAGGATGCTATTGC TERM 2207 2017990 - 2018004 + F 80 -11.4 -2.68719 | opp_overlap 2017981, overlap 2017989 2017992 AGATCACCGGTGTGG CAGCCG GTT CGGCTG ATTATGATGTGGTCA TERM 2208 2018467 - 2018481 + F 80 -11.4 -2.64747 | opp_overlap 2018458, overlap 2018466 2018469 AGATCACCGGTGTGG CAGCCG GTT CGGCTG ATTATGATGCGGTCA TERM 2209 2019692 - 2019721 + F 84 -10.7 -3.61089 | opp_overlap 2019693, overlap 2019693 GTTTAATAATCATTA ACGGGTTGTGCGA TTTT TTGCACAGCCCGA TTCTACTTCTTAGGG TERM 2210 2019693 - 2019720 + F 95 -14.2 -2.76171 | opp_overlap 2019693, overlap 2019692 TTTAATAATCATTAA CGGGTTGTGCGA TTTT TTGCACAGCCCG ATTCTACTTCTTAGG TERM 2211 2019720 - 2019693 - f 76 -9.8 -3.33171 | opp_overlap 2019693 2019692 TTTAATAATCATTAA CGGGTTGTGCGA TTTT TTGCACAGCCCG ATTCTACTTCTTAGG YP_1814 2019754 - 2020707 + | hypothetical protein TERM 2212 2021087 - 2021066 - T 84 -10.1 -3.74693 | TGCCACCGTATTAAA GGTGATCGC TCAG GCGGTCACC GAACTCGATAATAAA YP_1815 2022269 - 2021061 - | transposase for the IS285 insertion element TERM 2213 2022740 - 2022761 + r 70 -5.1 -4.4261 | GTGTGACTAAGGTCA GGTCATGTC CATA GGCATCACC TTTTAATATTGCACA YP_1817 2023574 - 2023380 - | hypothetical protein YP_1818 2024125 - 2024373 + | hypothetical protein TERM 2214 2024513 - 2024539 + F 72 -7.2 -3.9749 | gap 1, overlap 2024512 CATCCCTGGGGGCTC GAG-CCGCGCC CTCCCT GGCGCGGACGC TTTACTCTTCTGCCT TERM 2215 2025902 - 2025888 - g 76 -11.4 -3.19522 | opp_overlap 2025887 2025886 CCAGTCAAGATGGAA CGCCTG TAT CAGGCG GGTTATGCCGAAGGA rssA1 2024766 - 2026022 + | putative lipoprotein TERM 2216 2026290 - 2026264 - g 84 -2.2 -5.60993 | opp_overlap 2026264 TCCTCGATAAAAAAA GTGTTCAGCG ATAGCTA CTCGGAACAC TCTTTCGATGAATGG YP_1820 2026177 - 2026410 + | hypothetical protein dnaC_15 2027735 - 2026953 - | transposase/IS protein TERM 2217 2027651 - 2027665 + g 77 -11.4 -3.3506 | overlap 2027664 CTGCCTGTTGTGACA GCGCAG GCG CTGCGC TTATAAGGCTTTCCA YP_1822 2028754 - 2027732 - | transposase for insertion sequence IS100 TERM 2218 2028776 - 2028758 - H 100 -13.2 -4.01078 | AAAAGTGACCATAAA CTCTCCTG AAT CAGGAGAG CAGATTACCCCCTGG ssnA 2029362 - 2030786 + | N-formimino-L-glutamate deiminase YP_1825 2030786 - 2031358 + | hypothetical protein trpE1 2033512 - 2031536 - | hypothetical protein TERM 2219 2031635 - 2031663 + g 76 -5.3 -4.89477 | GTCTGCTTGATGGGT GATTTCGGTTCCG GCT CGTAATCCAAATC TTTTATTCTTACGGG wcaG6 2035171 - 2036187 + | putative dehydrogenase gloB2 2036135 - 2036986 + | Zn-dependent hydrolase, including glyoxylases paaK 2036983 - 2038269 + | putative coenzyme synthetase TERM 2220 2038443 - 2038462 + G 73 -9.2 -3.727 | CATCGGGGTTTATTG GCGGGGCA TTTA TGCGCCGC TTTGCCTGTCATGAC wcaG7 2038403 - 2040199 + | nucleoside-diphosphate-sugar epimerase TERM 2221 2040728 - 2040740 + G 73 -5.5 -4.63486 | ACCCAGCATTACTGA CGCTT TGT GAGCG TTTTATTGCGGCAGT YP_1832 2040196 - 2040780 + | hypothetical protein YP_1834 2042283 - 2041714 - | hypothetical protein TERM 2222 2042342 - 2042326 - H 78 -2.3 -5.49809 | TAAAGTTGAAAAAAA GTTTAGA GAC TGTAAAC AATATTGTGTAATTG TERM 2223 2043584 - 2043605 + G 77 -10.1 -3.74693 | TTTATTATCGAGTTC GGTGACCGC CTGA GCGATCACC TTTAATACGGTGGCA YP_1835 2042402 - 2043610 + | transposase for the IS285 insertion element YP_1836 2045892 - 2043730 - | hypothetical protein YP_1837 2046471 - 2048582 + | hypothetical protein rpiB2 2048829 - 2049467 + | hypothetical protein smtA4 2050261 - 2049602 - | hypothetical protein fabG8 2051046 - 2050366 - | putative dehydrogenase TERM 2224 2051110 - 2051081 - R 87 -8.5 -4.57353 | gap 1, opp_overlap 2051081 GGCTATTAGATAAAA GCCGGGTGTGA-GA AGA CCGCCACTCCCGGC TTGAGTCACTAAGTT TERM 2225 2051393 - 2051375 - R 70 -9.6 -2.78695 | opp_overlap 2051374 2051373, overlap 2051374 TTGAGATAAAGTAAT CCGCTAAC TAT ATTAGCGG GGTTTTGGACTCATG YP_1841 2052337 - 2051387 - | hypothetical protein YP_1842 2053256 - 2052324 - | hypothetical protein TERM 2226 2052493 - 2052509 + g 84 -2.2 -5.59357 | overlap 2052485 GCTTTATGATTGTGT GCGATC TTTTC GATAGC TTTTTTTGATCTCAT YP_1843 2054167 - 2053262 - | hypothetical protein TERM 2227 2054837 - 2054868 + r 84 -10.9 -3.63515 | opp_overlap 2054836 2054835 GGCAACGAAGTAAGT CCCCAGGCGCTTA CATAAA TAAGTACCTGGGG TTGTTGAGCGTAGCC TERM 2228 2054923 - 2054950 + r 85 -4 -5.5112 | opp_overlap 2054923 2054920, overlap 2054924 ACGAGTATATAAGCA GTAGTGGAGCCG TCAA CGACCCCACTAA TTTTTTATTACTGAA TERM 2229 2054924 - 2054949 + r 70 -7.5 -3.89587 | opp_overlap 2054923 2054920, overlap 2054923 CGAGTATATAAGCAG TAGTGGAGCCG TCAA CGACCCCACTA ATTTTTTATTACTGA mhpC2 2056031 - 2054958 - | hypothetical protein TERM 2230 2055426 - 2055416 - G 70 -3.2 -4.87133 | AGTGTGTAAACAAAA TAGC CGG GCCA GATTTATCCACTACG YP_1845 2056714 - 2056244 - | hypothetical protein YP_1846 2057191 - 2056769 - | putative decarboxylase TERM 2231 2057370 - 2057346 - R 82 -8.6 -4.30104 | opp_overlap 2057351, overlap 2057343 2057349 TAAAGCAAGAAAGAA GAAGAGGAGG GAGAT CCTCCTCTTA AACCTGTATGCAAAA TERM 2232 2057367 - 2057349 - R 91 -10.3 -4.22676 | opp_overlap 2057351, overlap 2057343 2057346 AGCAAGAAAGAAGAA GAGGAGG GAGAT CCTCCTC TTAAACCTGTATGCA baeS4 2058859 - 2057468 - | putative two-component system sensor protein TERM 2233 2058170 - 2058193 + g 70 -4.4 -4.67904 | overlap 2058172 TTCCTGCCGTTCGAG CACGCCGTTG AATG CGACGGCCAG TTTTTGCAGTTCATC copR 2059557 - 2058865 - | transcriptional activator TERM 2234 2058958 - 2058969 + g 76 -7.2 -4.3739 | GGGCGTATCTATTTT CGCC CGCA GGCG TTTTATCGCCACCTC TERM 2235 2059639 - 2059668 + H 93 -8.7 -4.46112 | overlap 2059641 2059642 2059650 2059662 CCAACACCAGGCTGA CATTTTCCTGACA TTTT TGTCAGGAAAGTA TTTCTTTAACTGACA TERM 2236 2059641 - 2059666 + H 95 -11.3 -3.83744 | overlap 2059639 2059642 2059650 2059662 AACACCAGGCTGACA TTTTCCTGACA TTTT TGTCAGGAAAG TATTTCTTTAACTGA TERM 2237 2059642 - 2059665 + H 89 -12.6 -2.89523 | overlap 2059641 2059639 2059650 2059662 ACACCAGGCTGACAT TTTCCTGACA TTTT TGTCAGGAAA GTATTTCTTTAACTG YP_1849 2059822 - 2060913 + | alpha/beta fold family hydrolase mdaB2 2061062 - 2061769 + | flavodoxin TERM 2238 2062207 - 2062221 + G 79 -7.1 -4.73682 | opp_overlap 2062206, overlap 2062186 TTTTTCTGTAAAATC TGGCG TATTT CGCCA TTTTCTCTTCTGGCG TERM 2239 2062278 - 2062288 + G 70 -3.2 -4.88736 | CAGTATTGTGGTATA CGGA GTG TCTG TTTTTATGGGTCGTG YP_1851 2061784 - 2062479 + | hypothetical protein YP_1852 2063529 - 2062687 - | hypothetical protein TERM 2240 2063574 - 2063557 - H 100 -7.7 -5.83211 | opp_overlap 2063557 2063552 TATGAAAACAAAAAA TCCACGC AAGC ACGTGGA TTTTATCGGTTTTTT TERM 2241 2063557 - 2063574 + H 79 -7 -4.58242 | opp_overlap 2063557, overlap 2063552 TATGAAAACAAAAAA TCCACG CAAGCA CGTGGA TTTTATCGGTTTTTT YP_1853 2064160 - 2064816 + | hypothetical protein aes1 2064813 - 2065643 + | putative esterase pspE2 2065597 - 2066049 + | putative rhodanese-like protein TERM 2242 2066098 - 2066130 + T 100 -16.5 -3.63744 | opp_overlap 2066103, overlap 2066103 GACACTTTTTTGCCT TAAAACGCCTGATGA ACT TCATCGGGCGTTTTG TATTTTAACGACAGA TERM 2243 2066125 - 2066103 - T 100 -12 -4.07568 | opp_overlap 2066103 2066098 TTTTTTGCCTTAAAA CGCCTGATGA ACT TCATCGGGCG TTTTGTATTTTAACG TERM 2244 2066103 - 2066125 + T 100 -14.2 -4.89567 | opp_overlap 2066103, overlap 2066098 TTTTTTGCCTTAAAA CGCCTGATGA ACT TCATCGGGCG TTTTGTATTTTAACG tra5D 2066606 - 2066097 - | integrase core subunit YP_1857 2067025 - 2066624 - | transposase TERM 2245 2067172 - 2067155 - R 100 -11.3 -5.50723 | opp_overlap 2067155 CTATGAAAACAAAAA TCCACGC AATT GCGTGGA TTTTATAGCATTTTT TERM 2246 2067155 - 2067172 + r 100 -11.3 -4.47485 | opp_overlap 2067155 CTATGAAAACAAAAA TCCACGC AATT GCGTGGA TTTTATAGCATTTTT YP_1858 2068326 - 2067235 - | translation-associated GTPase pth 2069110 - 2068490 - | peptidyl-tRNA hydrolase TERM 2247 2068646 - 2068630 - G 74 -7.3 -4.18018 | opp_overlap 2068630 GGGGTTTACCCAAAA CAAAGCC AGT GACTTTG CTTTTATCACCAGGA TERM 2248 2069215 - 2069245 + H 93 -12.1 -3.68836 | opp_overlap 2069210 AAAAATAATTGTATA GTTGAATGATTTC CCTTC GGAATCATTCAAC TTCTTGGCTAAATAT YP_1860 2069442 - 2069714 + | hypothetical protein TERM 2249 2069781 - 2069746 - T 80 -9 -3.92577 | opp_overlap 2069751, overlap 2069751 GAATCTTCAAAAACA GAAAACCCGTTGTCGC ACAG GCTTCAACGGGTTTTT CTTTATCTGCTTCAA TERM 2250 2069751 - 2069776 + T 100 -8.9 -5.42975 | opp_overlap 2069746 2069751 TTCAAAAACAGAAAA CCCGTTGTCGC ACAG GCTTCAACGGG TTTTTCTTTATCTGC TERM 2251 2069776 - 2069751 - T 100 -8.9 -4.98672 | opp_overlap 2069751, overlap 2069746 TTCAAAAACAGAAAA CCCGTTGTCGC ACAG GCTTCAACGGG TTTTTCTTTATCTGC prsA 2070881 - 2069916 - | ribose-phosphate pyrophosphokinase ipk 2072103 - 2071204 - | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase lolB 2072728 - 2072105 - | outer membrane lipoprotein LolB hemA 2073034 - 2074305 + | glutamyl-tRNA reductase TERM 2252 2074684 - 2074703 + G 79 -7.1 -4.60487 | opp_overlap 2074672, overlap 2074686 AATCCGCGCGGGGAC TGGCGGC GATGAA GCCGCTA TTTTTGCCGGTGATA prfA 2074328 - 2075410 + | peptide chain release factor 1 hemK1 2075410 - 2076240 + | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase YP_1867 2076304 - 2076705 + | hypothetical protein YP_1868 2076702 - 2077511 + | putative transcriptional regulator kdsA 2077607 - 2078461 + | 2-dehydro-3-deoxyphosphooctonate aldolase TERM 2253 2078603 - 2078580 - T 100 -11 -5.46657 | overlap 2078594 2078598 TAGGGCAATAAAAAA GGCAGCGTAG GCAA CTAAGCTGCC TCAGACTGCTGACAA TERM 2254 2078692 - 2078666 - T 84 -10.1 -3.82218 | gap 1, opp_overlap 2078675, overlap 2078667 2078682 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 2255 2078693 - 2078667 - T 72 -10.1 -2.88849 | gap 1, opp_overlap 2078675, overlap 2078666 2078682 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT TERM 2256 2078771 - 2078794 + T 81 -5.2 -5.1861 | opp_overlap 2078766, overlap 2078772 TTGTCAATAACCTCA CGCAGCGTAG GTAA CTAAGCTGCC TTTTTTGATAATCAA TERM 2257 2078772 - 2078793 + T 75 -8.7 -3.70443 | opp_overlap 2078766, overlap 2078771 TGTCAATAACCTCAC GCAGCGTAG GTAA CTAAGCTGC CTTTTTTGATAATCA sUL1 2080512 - 2078815 - | putative sulfate transporter YchM YP_1871 2081047 - 2080751 - | hypothetical protein TERM 2258 2081342 - 2081321 - R 100 -6.5 -5.95166 | TGTAACCAAAAAAAA GGCCCCGAC TTTC GTCAGAACC TTATTTTTGAATTTG TERM 2259 2081444 - 2081481 + r 88 -12.7 -2.62184 | CACTCAGACACCTCA CCGTTTCGTTGCGCCGT TATA GTGGTGCAACGGGGCGG TACTATAGGGGGCGA TERM 2260 2081605 - 2081591 - R 74 -10 -3.18452 | ATTAGGTGAATTTAA CGCCAA TTT TTGGCG GTGGCGGGGGAGTCA ugpQ2 2082462 - 2081587 - | hypothetical protein TERM 2261 2082675 - 2082647 - R 75 -10.3 -2.87564 | overlap 2082667 TCATTCGCTGATACA GTCGCCGTTTCGT CGA ACAATACAGCGAC TGTACCCGCCAAGGA tbpA1 2083845 - 2082763 - | hypothetical protein potC1 2084701 - 2083865 - | putative binding-protein-dependent transport system membrane protein potB1 2085564 - 2084698 - | putative binding-protein-dependent transport system membrane protein TERM 2262 2084901 - 2084890 - G 85 -7.2 -4.87665 | GGCGACCGAGAAAAA GGCG AAAT CGCC CAGTGCACCGATAAA TERM 2263 2086353 - 2086335 - H 100 -16 -4.36914 | opp_overlap 2086335 TTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC TERM 2264 2086335 - 2086353 + H 100 -16 -3.07307 | opp_overlap 2086335 TTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC YP_1877 2086415 - 2086843 + | putative transposase TERM 2265 2087001 - 2087025 + F 93 -9.9 -4.3953 | opp_overlap 2087004, overlap 2087003 2087004 ATAGGCGCATATGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTCTGCTTCAG TERM 2266 2087003 - 2087023 + F 100 -12.5 -3.79611 | opp_overlap 2087004, overlap 2087001 2087004 AGGCGCATATGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTCTGCTTC TERM 2267 2087004 - 2087022 + F 100 -16 -2.86682 | opp_overlap 2087004, overlap 2087003 2087001 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTCTGCTT TERM 2268 2087022 - 2087004 - f 100 -16 -4.8048 | opp_overlap 2087003 2087001 2087004 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTCTGCTT ugpQ3 2087551 - 2088381 + | glycerophosphoryl diester phosphodiesterase nagC6 2088353 - 2089507 + | putative transcriptional regulatory protein TERM 2269 2089625 - 2089612 - f 76 -2.5 -5.252 | opp_overlap 2089605 TACTGGTATAAAAAA TTTAT TGAT ATAAA ACAGTGATTGATACA TERM 2270 2089753 - 2089735 - f 100 -8.1 -5.80951 | opp_overlap 2089734 2089735 ATGCAAAAGAAAAAA CCCAACC ATAAA GGTCGGG GTTTATTATTTGGCG TERM 2271 2089973 - 2089989 + F 73 -7.3 -4.16016 | overlap 2089965 AAAGTTATAGCAATT TGCTGAT TTC ATCGGCA TTTATTGAGGGATAC hIS2 2090142 - 2090879 + | putative hydrolase torD2 2090916 - 2091476 + | hypothetical protein TERM 2272 2091921 - 2091962 + T 78 -8.7 -3.80625 | GTAGCGTGAAATGAC CTGTGCCGGTTAGTCAGTC AATG GGATGACTAATTGGCCCGG TTTAACTTCTAACCC YP_1882 2092523 - 2091930 - | hypothetical protein TERM 2273 2092364 - 2092376 + g 70 -4.9 -4.62302 | TACCGATCTGTTTTT CATAA TTA TTATG TTTTTGCAGGTATTC TERM 2274 2092882 - 2092835 - R 79 -10.8 -3.14931 | gap 1, opp_overlap 2092847 CGTATGCGCGAGGAA TGT-GCTTATCAACCGGAAAGGC AAA ACGTCTCCGGTTGATAAGGGACA TAACGTTAGCTGCTG proP20 2094093 - 2092888 - | multidrug resistance protein MdtH TERM 2275 2093849 - 2093865 + g 70 -8.7 -3.53012 | opp_overlap 2093862 GCTCGCATTAGCATC CCGGTGA CAA TCATCGG TTTGGCACCGAACCG rimJ 2094387 - 2094971 + | ribosomal-protein-S5-alanine N-acetyltransferase TERM 2276 2095626 - 2095589 - g 79 -5.5 -5.0133 | opp_overlap 2095611, overlap 2095591 TAGCCCTTGAAAAAA CAGCCCTTGAAGCTAGG GTTG CCCAGCTTGAACAGCAG GTTATCCAGTTGTCA TERM 2277 2095624 - 2095591 - g 71 -6.7 -4.13561 | opp_overlap 2095611, overlap 2095589 GCCCTTGAAAAAACA GCCCTTGAAGCTAGG GTTG CCCAGCTTGAACAGC AGGTTATCCAGTTGT TERM 2278 2095862 - 2095876 + G 82 -7.1 -4.88736 | TGGATACGCTCGCTG CGGCA AGTGA TGCCG TTTTTGTCCATAGTA mviM3 2094979 - 2096589 + | putative oxidoreductase TERM 2279 2096792 - 2096818 + F 71 -8.7 -3.34894 | opp_overlap 2096796, overlap 2096790 2096793 2096796 CCCCCATTGGGTAGA GCAACGCCTGC AGACC GTAGGCGTTGG TATTTACAGCACATT TERM 2280 2096793 - 2096817 + F 83 -12.2 -2.60615 | opp_overlap 2096796, overlap 2096792 2096790 2096796 CCCCATTGGGTAGAG CAACGCCTGC AGACC GTAGGCGTTG GTATTTACAGCACAT TERM 2281 2096963 - 2096975 + G 90 -6.2 -5.28826 | ATTTGGTGCAGGTAT GGCG ACGGA CGCC TTTTTTGTGGCATTT mviN 2096856 - 2098391 + | hypothetical protein TERM 2282 2098466 - 2098482 + F 100 -9.4 -5.1615 | opp_overlap 2098466 ATAATGTATTATATA GCCCGA TAATT TCGGGC TTTTTTACATATTGA TERM 2283 2098482 - 2098466 - f 71 -9.4 -2.96538 | opp_overlap 2098466 ATAATGTATTATATA GCCCGA TAATT TCGGGC TTTTTTACATATTGA TERM 2284 2099058 - 2099047 - g 100 -4.4 -5.74122 | CATCACAGAAAAAAA TCTC CCCA GAGA AAATATGCCTGCCAA fhaC1 2098839 - 2100500 + | putative hemolysin activator protein TERM 2285 2101128 - 2101154 + T 70 -8 -3.63991 | opp_overlap 2101125 ATGATAATAATATGG CTGATGCATTGA CAC TCATTGCACCAG TTATTAGCACTAATG TERM 2286 2103380 - 2103366 - T 73 -5.7 -4.42238 | overlap 2103377 GCAGTCGAACCAAAA CGTCA GACAA TGACG CGTTAGCGTTGGTTA TERM 2287 2105296 - 2105308 + T 72 -6.2 -4.2461 | overlap 2105296 TAAAGATGTCTCTGA GGGG AAAAC CCCC TTTATTCATCACCCT TERM 2288 2105466 - 2105479 + T 100 -9.5 -5.07107 | CTAATCGTTTTTTAA GGCCC CGAG GGGCC TTTTTTGACGATTTA TERM 2289 2105507 - 2105533 + T 74 -8 -3.95674 | TTACATCCGCTCAAC GGTTTGAATACC CAA GGTGTCCAGACC TTGTTTCAGCGTTTT argS 2107222 - 2105492 - | arginyl-tRNA synthetase YP_1890 2107845 - 2108420 + | hypothetical protein TERM 2290 2108825 - 2108842 + G 76 -2.7 -5.06414 | gap 1, overlap 2108829 GGTTCATCCGATAGT TCGGCCAC GTG GTGG-TGA TTTTTGTTACAGCAG cutC 2108652 - 2109416 + | copper homeostasis protein CutC TERM 2291 2109579 - 2109603 + T 100 -10 -4.80959 | ATATAACGAACGGTA TCCCCCATCT GGGTG AGTTGGGGGA TTTTCTTATGGCTTA smtA5 2110580 - 2109609 - | hypothetical protein smtA6 2111380 - 2110577 - | hypothetical protein TERM 2292 2110657 - 2110673 + g 70 -2.1 -4.94992 | opp_overlap 2110656, overlap 2110658 CCGCGTGTTCAAACC CCGCCTG ATG CAGACGA TTTTTGTGGGTTTCC TERM 2293 2111511 - 2111495 - R 100 -10.8 -4.46072 | GGGAATAAACATAAA GGCGGC GATAT GCCGCC CAGACTAACGGTTGC YP_1894 2111966 - 2111571 - | hypothetical protein YP_1895 2112961 - 2112146 - | hypothetical protein TERM 2294 2114105 - 2114118 + G 74 -2.3 -5.16841 | TAACCGTCGTCGTGA TCTGG GTGG CCTGA TTTTTATTGATATGC aspS 2114019 - 2115815 + | aspartyl-tRNA synthetase TERM 2295 2116182 - 2116196 + G 73 -11.4 -3.0263 | ACCAGTGGTTGGATG CGGCAG AGG CTGCCG TATTGACCAAGTCCT ntpA 2115815 - 2116258 + | dATP pyrophosphohydrolase TERM 2296 2116363 - 2116349 - g 73 -5.6 -4.66537 | overlap 2116351 2116359 TGGGCCAACACAAAA CACCGC AAA GCGGCA CAGGATGCCAAACGC TERM 2297 2116361 - 2116351 - g 72 -8.2 -3.94773 | overlap 2116349 2116359 GGCCAACACAAAACA CCGC AAA GCGG CACAGGATGCCAAAC YP_1898 2116316 - 2117059 + | hypothetical protein ruvC 2117268 - 2117789 + | Holliday junction resolvase TERM 2298 2117847 - 2117828 - f 83 -12.2 -2.79831 | opp_overlap 2117828 2117843 TTAACTGTTATCACA GGCTGGAT ATCC ATCCAGCC TTTTTTATGCTATAA TERM 2299 2117828 - 2117847 + F 100 -12.2 -5.34555 | opp_overlap 2117828, overlap 2117843 TTAACTGTTATCACA GGCTGGAT ATCC ATCCAGCC TTTTTTATGCTATAA TERM 2300 2118125 - 2118108 - g 73 -6.3 -4.58663 | gap 1 ATCATTCTGGAAAAA CAGCCACC GCT GGTG-CTG CTGGAAACAAACGGT TERM 2301 2118442 - 2118428 - g 71 -5.6 -4.56597 | opp_overlap 2118430, overlap 2118430 GGGTGTCGGTAAAAA GACCGC CGA GCGGTT AGTGGTCGAAATGAA TERM 2302 2118440 - 2118430 - g 72 -8.2 -3.90048 | opp_overlap 2118430, overlap 2118428 GTGTCGGTAAAAAGA CCGC CGA GCGG TTAGTGGTCGAAATG ruvA 2118072 - 2118686 + | Holliday junction DNA helicase motor protein ruvB 2118848 - 2119852 + | Holliday junction DNA helicase B TERM 2303 2119849 - 2119907 + T 72 -9.8 -2.85803 | gap 1, opp_overlap 2119853 2119855, overlap 2119833 TATTACTCGGGAAGA ATAATACGTTTCACGCTGTGGGGGTTA TAGGCC TAAACCCCACAGCGTGAAGTG-ATGAC TATCCTCGTGCTTTT TERM 2304 2119903 - 2119853 - T 89 -10.6 -3.94877 | gap 1, opp_overlap 2119833 2119849, overlap 2119855 ACTCGGGAAGAATAA TACGTTTCACGCTGTGGGGGTTA TAGGCC TAAACCCCACAGCGTGAAGTG-A TGACTATCCTCGTGC TERM 2305 2119902 - 2119855 - T 100 -15.7 -3.56318 | opp_overlap 2119849, overlap 2119853 TCGGGAAGAATAATA CGTTTCACGCTGTGGGGGTTA TAGGCC TAAACCCCACAGCGTGAAGTG ATGACTATCCTCGTG znuB 2120692 - 2119907 - | high-affinity zinc transporter membrane component TERM 2306 2120635 - 2120622 - G 76 -5.9 -4.61566 | CGCCAAACGACAAAA GACCC CAGC GGGCC AGCGGCTGTTGCCAG znuC 2121447 - 2120689 - | high-affinity zinc transporter ATPase TERM 2307 2121137 - 2121153 + g 76 -4.3 -5.00616 | opp_overlap 2121116 TGCACCCGTGTGAGT GCAGGCA GAA TGTCGGC TTTTTTCACCCCCGG TERM 2308 2121267 - 2121239 - G 70 -8.1 -3.65812 | TTTTGCGGAACATAA CCGATGCGTAAGC CAG GCTCACGAACCAG AGATCCACTACTTGG znuA 2121523 - 2122479 + | high-affinity zinc transporter periplasmic component TERM 2309 2122592 - 2122612 + G 86 -8.2 -4.60797 | GACTGTAATGACACT GGCCGTCG CTGTT TGGCGGCC TTTTATCTATCACCC nlpD3 2122500 - 2123816 + | hypothetical protein TERM 2310 2123823 - 2123846 + F 73 -8.8 -3.5511 | overlap 2123821 2123825 CTGGATTAGCAGTGA TACCGTCAGG TTAG CCTGTCGGTG TGTTTATCCCTAAGC TERM 2311 2123825 - 2123844 + F 74 -9.2 -3.34988 | overlap 2123823 2123821 GGATTAGCAGTGATA CCGTCAGG TTAG CCTGTCGG TGTGTTTATCCCTAA TERM 2312 2123856 - 2123890 + F 100 -15.2 -3.74077 | overlap 2123861 TCGGTGTGTTTATCC CTAAGCTGCCAGTG AGTTGAG CACTGGCAGTTTAG TTTCAGTCTGTCAGC TERM 2313 2123861 - 2123885 + F 100 -11.5 -4.09556 | overlap 2123856 GTGTTTATCCCTAAG CTGCCAGTG AGTTGAG CACTGGCAG TTTAGTTTCAGTCTG msbB 2124083 - 2125045 + | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase TERM 2314 2125166 - 2125145 - T 100 -15.9 -4.36595 | opp_overlap 2125141 2125140 CAGTTAAAGGTAAAA GGCCCGCTA GTGA TAGCGGGCC TGAGGTTATTGACAA TERM 2315 2125244 - 2125270 + T 72 -10.1 -2.88849 | gap 1, opp_overlap 2125233, overlap 2125239 2125245 ACATCCATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCTCTGCC TERM 2316 2125245 - 2125271 + T 84 -10.1 -3.82218 | gap 1, opp_overlap 2125233, overlap 2125239 2125244 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCTCTGCCT TERM 2317 2125329 - 2125360 + T 100 -10.8 -4.46757 | overlap 2125334 GGGGTTTGTCAGCAG TCTGAGGCCCGCTA GTGA TAGCGGGCCTTTGC TTTTCTGCCTATCTT TERM 2318 2125334 - 2125355 + T 100 -15.9 -4.27483 | overlap 2125329 TTGTCAGCAGTCTGA GGCCCGCTA GTGA TAGCGGGCC TTTGCTTTTCTGCCT pykA 2126827 - 2125385 - | pyruvate kinase rpiR4 2128026 - 2127157 - | DNA-binding transcriptional regulator HexR zwf 2128388 - 2129863 + | glucose-6-phosphate 1-dehydrogenase TERM 2319 2129917 - 2129882 - f 78 -9.7 -3.42574 | overlap 2129884 2129885 CTAACCGCACGATAA TAGCGCGCCACCAGA GGCGAA TCTGATGGCGCGTGA CTGCCAGGGAGAGCA TERM 2320 2129915 - 2129884 - f 95 -12.3 -3.28219 | overlap 2129882 2129885 AACCGCACGATAATA GCGCGCCACCAGA GGCGAA TCTGATGGCGCGT GACTGCCAGGGAGAG TERM 2321 2129914 - 2129885 - f 100 -15.8 -2.56449 | overlap 2129884 2129882 ACCGCACGATAATAG CGCGCCACCAGA GGCGAA TCTGATGGCGCG TGACTGCCAGGGAGA eda 2130105 - 2130746 + | keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase TERM 2322 2130799 - 2130825 + F 100 -11.6 -5.03314 | opp_overlap 2130799 2130797 2130803 2130804, overlap 2130804 TATTTTCACCAAAGA CAGAGCCTCTGC ATT GCAGGGGTTTTG TTTTTTCAGAATCAC TERM 2323 2130804 - 2130820 + F 100 -10.1 -5.42198 | opp_overlap 2130799 2130804 2130803 2130797, overlap 2130799 TCACCAAAGACAGAG CCTCTGC ATT GCAGGGG TTTTGTTTTTTCAGA emrE1 2131575 - 2131904 + | membrane transporter emrE2 2131873 - 2132220 + | multidrug efflux system protein MdtI TERM 2324 2132267 - 2132240 - T 70 -9.8 -2.52015 | opp_overlap 2132241, overlap 2132239 GCCAGAGGCAGTAAG CGGAGGGTAGCC TGGC GGCTACTCTCCT TTGTTTTTGTGGCTT TERM 2325 2132241 - 2132266 + T 100 -15.5 -4.97405 | opp_overlap 2132240 2132239 CCAGAGGCAGTAAGC GGAGGGTAGCC TGGC GGCTACTCTCC TTTGTTTTTGTGGCT tdcF2 2132696 - 2132352 - | hypothetical protein TERM 2326 2133389 - 2133376 - g 74 -9.5 -3.53012 | TGTTTTGTGGTGAAA GCCCG TCGT CGGGC GATGGATGCTGATGT TERM 2327 2133405 - 2133424 + G 100 -10 -4.82901 | opp_overlap 2133417 GATGGATGCTGATGT GGTGGTGG TAAA CCACCATC TTTTTCTGGCGGACA dinG2 2132827 - 2134221 + | DEAD box family helicase YP_1915 2134239 - 2134991 + | hypothetical protein slp 2135128 - 2135733 + | putative outer membrane protein TERM 2328 2135771 - 2135754 - f 100 -9.1 -4.82901 | gap 1 TTTGGGCCACAAAAA GGCGC-GG AGT CCAGCGCC TGAGGTTATTGACAA TERM 2329 2135849 - 2135875 + F 72 -10.1 -2.87229 | gap 1, opp_overlap 2135838, overlap 2135844 2135850 ACATCCATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCTACCGT TERM 2330 2135850 - 2135876 + F 84 -10.1 -3.79519 | gap 1, opp_overlap 2135838, overlap 2135844 2135849 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCTACCGTT TERM 2331 2135927 - 2135944 + F 100 -12.7 -4.64844 | TTGTCAGCAGTCAGA GGCGCTG AGTC CAGCGCC TTTTCTATATCTACA TERM 2332 2136483 - 2136498 + G 71 -6.1 -4.29106 | opp_overlap 2136493 CGCGGCGTTGCGTTA TGCGG ACCAAC CCGCA TTTATTAATATGGGC fadD 2136325 - 2138064 + | long-chain-fatty-acid--CoA ligase TERM 2333 2138119 - 2138083 - f 100 -14.6 -3.767 | gap 1, opp_overlap 2138084 2138087, overlap 2138084 2138086 2138090 2138093 GACGGAGTCACTAAA TCATCAACAACGCCGGT TATC ACCGGCGTTGTTG-TGT TTGTTATCGAACTAT TERM 2334 2138084 - 2138118 + F 100 -18.1 -4.31433 | gap 1, opp_overlap 2138083 2138084 2138086 2138090 2138093, overlap 2138087 ACGGAGTCACTAAAT CATCAACAACGCCGGT TATC ACCGGCGTTGTTG-TG TTTGTTATCGAACTA TERM 2335 2138118 - 2138084 - f 100 -18.1 -2.85699 | gap 1, opp_overlap 2138084 2138087, overlap 2138083 2138086 2138090 2138093 ACGGAGTCACTAAAT CATCAACAACGCCGGT TATC ACCGGCGTTGTTG-TG TTTGTTATCGAACTA TERM 2336 2138117 - 2138086 - f 100 -17.4 -2.97667 | opp_overlap 2138084 2138087, overlap 2138084 2138083 2138090 2138093 GGAGTCACTAAATCA TCAACAACGCCGGT TATC ACCGGCGTTGTTGT GTTTGTTATCGAACT TERM 2337 2138087 - 2138116 + F 100 -20.9 -3.75817 | opp_overlap 2138086 2138084 2138083 2138090 2138093, overlap 2138084 GAGTCACTAAATCAT CAACAACGCCGGT TATC ACCGGCGTTGTTG TGTTTGTTATCGAAC TERM 2338 2138113 - 2138090 - f 100 -16.8 -3.34227 | opp_overlap 2138087 2138084, overlap 2138086 2138084 2138083 2138093 TCACTAAATCATCAA CAACGCCGGT TATC ACCGGCGTTG TTGTGTTTGTTATCG TERM 2339 2138110 - 2138093 - f 100 -12.7 -3.79909 | opp_overlap 2138087 2138084, overlap 2138090 2138086 2138084 2138083 CTAAATCATCAACAA CGCCGGT TATC ACCGGCG TTGTTGTGTTTGTTA TERM 2340 2139159 - 2139139 - g 78 -2.6 -5.24129 | opp_overlap 2139139, overlap 2139141 CCGGGGTACAAAAAA GTCTTTAA AGATA TTAAAGCC TTGATTCAATCGGTC rnd 2138185 - 2139345 + | ribonuclease D TERM 2341 2139368 - 2139397 + T 70 -10.1 -2.54204 | opp_overlap 2139363 2139365 2139386, overlap 2139367 2139366 2139393 2139394 TGATATTAATCAGCC TTCAGGGTGGGAT ATTA ATTCCACGCTGAA ACTTTTCAGTTTTAA TERM 2342 2139393 - 2139406 + T 73 -5.3 -4.61873 | opp_overlap 2139386 2139365, overlap 2139368 2139367 2139366 2139394 GATATTAATTCCACG CTGAA ACTT TTCAG TTTTAATTTATGAAC TERM 2343 2139570 - 2139539 - T 100 -17.5 -3.43117 | opp_overlap 2139542, overlap 2139542 ACAGTCAATTGAGAA TAACGCCCCTGTA AATAAA TACAGGGGCGTTA TTGAGAAGAAATCAT TERM 2344 2139542 - 2139567 + T 100 -14.8 -3.61517 | opp_overlap 2139539 2139542 GTCAATTGAGAATAA CGCCCCTGTA AATAAA TACAGGGGCG TTATTGAGAAGAAAT TERM 2345 2139567 - 2139542 - T 100 -14.8 -3.84808 | opp_overlap 2139542, overlap 2139539 GTCAATTGAGAATAA CGCCCCTGTA AATAAA TACAGGGGCG TTATTGAGAAGAAAT minE 2139851 - 2139582 - | cell division topological specificity factor MinE minD 2140667 - 2139855 - | cell division inhibitor MinD minC 2141378 - 2140692 - | septum formation inhibitor TERM 2346 2141048 - 2141063 + g 70 -4.6 -4.70879 | overlap 2141050 2141059 CCGGCGGACTGATGA CCGGCT CTGG AGCCAG TTTTTGGCCTTTACC TERM 2347 2141584 - 2141600 + r 74 -6.5 -4.55491 | TTGACCCCCTATATT TAGCGAC TCA GCCGCTA TTTTATGATTGCATA TERM 2348 2141604 - 2141615 + r 71 -3 -5.03145 | ACTCAGCCGCTATTT TATG ATTG CATA TTTTTTCAACACTTG YP_1922 2142063 - 2141800 - | hypothetical protein YP_1923 2142095 - 2142367 + | hypothetical protein mltB1 2142508 - 2143593 + | putative lipoprotein mhpD3 2143778 - 2144320 + | hypothetical protein TERM 2349 2144359 - 2144328 - f 82 -7.9 -4.45693 | overlap 2144329 2144330 TAATATAAAGAGAAA CGTGCCGTCCGAC TCTACT GTCGGGCGGCAAA ACTTGCATCTGTAAG TERM 2350 2144358 - 2144329 - f 74 -9.2 -3.25789 | overlap 2144328 2144330 AATATAAAGAGAAAC GTGCCGTCCGAC TCTACT GTCGGGCGGCAA AACTTGCATCTGTAA TERM 2351 2144357 - 2144330 - f 86 -12.7 -2.53847 | overlap 2144329 2144328 ATATAAAGAGAAACG TGCCGTCCGAC TCTACT GTCGGGCGGCA AAACTTGCATCTGTA YP_1926 2144423 - 2144869 + | hypothetical protein TERM 2352 2145267 - 2145280 + F 80 -4.5 -5.20328 | opp_overlap 2145239 2145237 TGCCAAATTCGCGAA GGTGG ACAT CTACC TTTATTTTTTTCCCC TERM 2353 2146182 - 2146200 + F 100 -13.2 -4.01078 | CCAGGGGGTAATCTG CTCTCCTG ATT CAGGAGAG TTTATGGTCACTTTT YP_1928 2146204 - 2147226 + | transposase for insertion sequence IS100 TERM 2354 2147307 - 2147293 - g 77 -11.4 -3.3506 | overlap 2147284 TGGAAAGCCTTATAA GCGCAG CGC CTGCGC TGTCACAACAGGCAG dnaC_16 2147223 - 2148005 + | transposase/IS protein YP_1930 2148433 - 2148173 - | putative phage excisionase YP_1931 2148714 - 2148511 - | hypothetical protein YP_1932 2149431 - 2148733 - | putative methyltransferase TERM 2355 2148813 - 2148825 + g 70 -3.3 -4.86773 | AGCCTTTCCGTCCGG CAGCC GAT GACTG TTTTTCCTGCTTTTG YP_1933 2149458 - 2149904 + | putative phage nin-region protein YP_1934 2149978 - 2150583 + | hypothetical protein YP_1935 2150584 - 2150973 + | putative phage antitermination protein TERM 2356 2151062 - 2151073 + G 100 -7.2 -5.64274 | opp_overlap 2151055, overlap 2151055 CACAACAACGCATAG CCGC GTTT GCGG TTTTTTTATGCGTAA YP_1936 2150977 - 2151195 + | hypothetical protein YP_1937 2151244 - 2151807 + | hypothetical protein TERM 2357 2151901 - 2151919 + T 82 -5.9 -5.04601 | opp_overlap 2151901 ACACCATTAAAAAAG GCCTCGT ATATC GCGGGGC TTTTTCGTTTCTACA YP_1938 2152074 - 2151892 - | hypothetical protein TERM 2358 2152126 - 2152151 + r 76 -9.7 -3.39856 | opp_overlap 2152102, overlap 2152127 GCAAGTCCTCGGCAT GGTCGCCCTCA TTGG TGAGGGTGACA TTCATTAACTATATG TERM 2359 2152127 - 2152150 + r 91 -13.2 -2.63432 | overlap 2152126 CAAGTCCTCGGCATG GTCGCCCTCA TTGG TGAGGGTGAC ATTCATTAACTATAT TERM 2360 2152191 - 2152208 + r 100 -9.1 -4.8622 | ACCAACTAATTTCAA GGCTCAC TTCG GTGGGCC TTTTTACTTCAGAGA TERM 2361 2152437 - 2152416 - R 84 -10.1 -3.74693 | TGCCACCGTATTAAA GGTGATCGC TCAG GCGGTCACC GAACTCGATAATAAA YP_1939 2153619 - 2152411 - | transposase for the IS285 insertion element TERM 2362 2153873 - 2153894 + r 78 -8.7 -3.827 | TAAATTGCTTTAGCC GATGACAGC CTAA GCTGCCATC TTTACCTTCATTGTT proP21 2155096 - 2153924 - | hypothetical protein TERM 2363 2154089 - 2154073 - G 83 -5.1 -5.0925 | overlap 2154075 GCGGAAAACCAAAAA TACCCAC GAA GTAGGCA ACGACAAACCAAGTC nifS 2156299 - 2155100 - | putative aminotransferase YP_1942 2157101 - 2156316 - | hypothetical protein TERM 2364 2157904 - 2157929 + H 70 -7.7 -3.65046 | opp_overlap 2157903 TTTTCTTTAATAGAT TCACTATTCCT GCGC AGGAATAATGA TTATTAACATAGCCA TERM 2365 2158076 - 2158057 - H 80 -6.4 -4.88067 | ATGCATGGAGAAAAA GGTGAGGA TATG TCCTTACC CATGGCGGTTTTTAC YP_1943 2158148 - 2158504 + | hypothetical protein TERM 2366 2158556 - 2158591 + T 73 -8.5 -3.66378 | opp_overlap 2158556 2158555 2158550 ATTGACTAATGAAAC TCAGATCAACAGG GGATGGAAAA TCTGTTGATCTGA TTTCAATCCAATCTG TERM 2367 2158895 - 2158877 - T 100 -11.7 -4.98522 | opp_overlap 2158877 AATCTGATATAAAAA TGGCGCC AGAGA GGCGCCA TTGATAATAAAGATA TERM 2368 2158877 - 2158895 + T 84 -11.7 -3.21416 | opp_overlap 2158877 AATCTGATATAAAAA TGGCGCC AGAGA GGCGCCA TTGATAATAAAGATA dsbB 2159451 - 2158921 - | disulfide bond formation protein B nhaB 2161261 - 2159687 - | sodium/proton antiporter TERM 2369 2159899 - 2159909 + g 72 -8.2 -3.83026 | opp_overlap 2159899 2159898 GCAGGAACAAGAAAG CGGC CTG GCCG TTTGGTGTCGCCACG TERM 2370 2160097 - 2160086 - G 78 -5.8 -4.74917 | ATTAAACAGATAAAA CAGC GATA GCTG AGCGGAAGGCGAGGC TERM 2371 2160795 - 2160780 - G 73 -3.2 -5.00846 | overlap 2160781 TAAATAGTATAAAAA CCAACG GATA CGCTGA TAACTACCGCGATTA TERM 2372 2160928 - 2160917 - G 71 -5.8 -4.32857 | opp_overlap 2160917 TTTCGTAAATACAAA CAGC AGCA GCTG TTTCATAAAGTAGAT TERM 2373 2161892 - 2161874 - g 70 -3 -4.88736 | overlap 2161884 CATCATCCAGAAAAA GCGCAAGA AAT TTTGGCGC GAGCGAAAACAGTGG fadR2 2161505 - 2162224 + | fatty acid metabolism regulator TERM 2374 2162395 - 2162411 + T 100 -10.1 -5.04385 | TTGTCAGCAGTCTGA GGGGCGT TTA ATGCCCC TTTTTTACCGATGTC spoVR 2163977 - 2162442 - | hypothetical protein TERM 2375 2165226 - 2165246 + G 77 -8.9 -3.97368 | overlap 2165222 CTACCGCGCTACTGG CCGGGCTGG TGT CTATCCCGG TTTATCCATTGAAGG TERM 2376 2165715 - 2165761 + G 80 -9.6 -3.98291 | opp_overlap 2165712, overlap 2165716 AGCCACTGAATATTG CCCCGTTACACGATATTCAC CCCATCC GTTAATATCGTGTAACGCGA TTATTTGCCGTTGTT TERM 2377 2165716 - 2165760 + G 78 -13.1 -2.9789 | opp_overlap 2165712, overlap 2165715 GCCACTGAATATTGC CCCGTTACACGATATTCAC CCCATCC GTTAATATCGTGTAACGCG ATTATTTGCCGTTGT dadA1 2164442 - 2165746 + | D-amino acid dehydrogenase small subunit proP22 2166964 - 2165762 - | putative multidrug resistance protein TERM 2378 2167203 - 2167167 - R 100 -15.4 -5.5112 | CTCATCAATAAAAAA TGCTATTACCTGCCCA GAGGG TAGACAGGTAATAGCA GACAGGTAATGGCGG YP_1950 2168098 - 2167229 - | hypothetical protein TERM 2379 2168068 - 2168089 + g 80 -2.9 -5.3671 | CCCAATGTTGACGAG GTGCACGGT AAAT ACCTTGAAC TTTTTTCATTATCTT lysR10 2168269 - 2169201 + | LysR family transcriptional regulator rhaT7 2170357 - 2169236 - | hypothetical protein TERM 2380 2169868 - 2169853 - G 71 -6.8 -4.20084 | AGCAGGCACCTAAAA TGGCCA GCGT CGGCCA TAATCCGGCAAATTG TERM 2381 2170450 - 2170412 - R 78 -5.3 -4.9792 | opp_overlap 2170412 TAGCCCATAGAAAAA GCCGGAAAATGCTTTCT GAACA AGAAAAAATTAACCGGC TGATATTGCTGCTAA YP_1953 2171781 - 2170462 - | hypothetical protein TERM 2382 2171784 - 2171841 + r 74 -9.9 -3.14307 | gap 1 CCACCGGCCTCACAC TGTCCCTTTGTCCTTGGCGTTACAGC ATGGTTA GCGGCAACGCCAAGGACGTAGTG-CA TAGTTTTGCCTTCCT prkA 2173820 - 2171886 - | hypothetical protein TERM 2383 2173562 - 2173590 + g 70 -10.4 -3.01712 | opp_overlap 2173560 GATAAGAAACAATCT GTTCTATGGCTT CCTCC ATGCCATAGAAC TCTTCAAACGCAGGA YP_1955 2174243 - 2175013 + | hypothetical protein TERM 2384 2175059 - 2175043 - T 93 -13.7 -2.78495 | opp_overlap 2175043, overlap 2175040 2175038 CTATGAGCAAGACCA TGGGGCC AAA GGCCCCA TTTTTATATTGACCG TERM 2385 2175043 - 2175059 + T 100 -13.7 -5.0916 | opp_overlap 2175043 2175040 2175038 CTATGAGCAAGACCA TGGGGCC AAA GGCCCCA TTTTTATATTGACCG YP_1956 2175961 - 2175086 - | hypothetical protein TERM 2386 2176231 - 2176248 + r 90 -11.3 -3.65529 | opp_overlap 2176231 CTATAAACAAGAAAA GCCACTC GCGT GAGTGGC TTTAGGTAGAAATCT TERM 2387 2176248 - 2176231 - R 100 -11.3 -5.05116 | opp_overlap 2176231 CTATAAACAAGAAAA GCCACTC GCGT GAGTGGC TTTAGGTAGAAATCT gapA 2177279 - 2176275 - | glyceraldehyde-3-phosphate dehydrogenase TERM 2388 2177538 - 2177556 + H 82 -2.4 -5.70522 | CAGTTTAGGACAATT TTAACTGC TTT GTTGTTAA TTTTTTGTTATTATT YP_1958 2177561 - 2178031 + | methionine sulfoxide reductase B YP_1959 2177997 - 2178374 + | hypothetical protein TERM 2389 2178468 - 2178489 + T 100 -13 -4.56597 | opp_overlap 2178468 TCTGAATACAAAAAA TGGGCGCC GAGGCA GGCGCCCA TTTTTGCGCAGAAAG TERM 2390 2178489 - 2178468 - T 100 -13 -5.47159 | opp_overlap 2178468 TCTGAATACAAAAAA TGGGCGCC GAGGCA GGCGCCCA TTTTTGCGCAGAAAG pncA 2179155 - 2178508 - | nicotinamidase/pyrazinamidase ansA 2180186 - 2179170 - | cytoplasmic asparaginase I TERM 2391 2180274 - 2180253 - R 100 -14.5 -4.7497 | opp_overlap 2180247 2180244 CTCAGCGAGGAAAAA CAGCCCGAT GGGT ATCGGGCTG AATATCTATCTGTAT sppA 2182153 - 2180303 - | protease 4 nfnB 2182316 - 2182867 + | hypothetical protein TERM 2392 2183282 - 2183294 + G 86 -3.4 -5.61596 | ACGGTGTTGGCATTA TCAG CACGA CTGA TTTTTTTATGCCGAT selD 2183092 - 2184138 + | selenophosphate synthetase topB 2184212 - 2186140 + | DNA topoisomerase III YP_1966 2186137 - 2186427 + | hypothetical protein nudG 2186826 - 2186440 - | pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase xthA 2187730 - 2186924 - | exonuclease III TERM 2393 2187505 - 2187517 + g 77 -9.1 -4.015 | GGAAACCTCGGCGCA CAGCC AGT GGCTG TTCTTTCGTCAATAG TERM 2394 2187583 - 2187571 - G 73 -3.3 -5.0538 | GCCCATGGTAAAAAA CGTGG TAA CCATG CTGGCTGACGTCTTC TERM 2395 2188693 - 2188681 - g 86 -6.3 -5.17054 | ATAATAGGGAAAAAA CTCTT TAA AAGAG AGAAATTTGGCATGA lysR11 2188540 - 2189400 + | LysR family transcriptional regulator purU 2190989 - 2190141 - | formyltetrahydrofolate deformylase YP_1971 2191537 - 2191073 - | hypothetical protein TERM 2396 2192066 - 2192086 + H 95 -7.6 -4.9138 | opp_overlap 2192068 AATGTTTACGCTGAA TAGCCACC TTTAT GGTGGTTA TTTTGTTTGCGTACT hnr 2192871 - 2193887 + | response regulator of RpoS ugd 2194167 - 2195540 + | putative nucleotide sugar dehydrogenase TERM 2397 2195919 - 2195942 + T 100 -15.4 -3.69323 | opp_overlap 2195919 TGAAAGACAAAAAAA CACCCTCCTA TTAA TAGGAGGGTG TTTCGATAGTAATAG TERM 2398 2195942 - 2195919 - T 100 -15.4 -5.88197 | opp_overlap 2195919 TGAAAGACAAAAAAA CACCCTCCTA TTAA TAGGAGGGTG TTTCGATAGTAATAG hns 2196382 - 2195975 - | global DNA-binding transcriptional dual regulator H-NS TERM 2399 2196099 - 2196121 + g 77 -10.6 -3.5394 | overlap 2196105 2196118 TTATACTGATATTTA GCAGGACGTG CAG CACGTTTTGC TTTACCAGCAGCTTT TERM 2400 2196105 - 2196115 + g 76 -6.8 -4.54727 | overlap 2196099 TGATATTTAGCAGGA CGTG CAG CACG TTTTGCTTTACCAGC tdk 2197132 - 2197722 + | thymidine kinase TERM 2401 2198382 - 2198423 + T 86 -6 -5.27477 | gap 2, opp_overlap 2198388, overlap 2198383 2198388 TAATTGGTCTGTAAA AGA-A-AACCCCCGATCAGC GGCT GCTCATCGGGGGTTATATCA TTTTTTGCTTACCCT TERM 2402 2198383 - 2198422 + T 81 -9.5 -3.75402 | gap 2, opp_overlap 2198388, overlap 2198382 2198388 AATTGGTCTGTAAAA GA-A-AACCCCCGATCAGC GGCT GCTCATCGGGGGTTATATC ATTTTTTGCTTACCC TERM 2403 2198415 - 2198388 - T 100 -15.6 -5.07652 | opp_overlap 2198383 2198382 2198388 GTCTGTAAAAGAAAA CCCCCGATCAGC GGCT GCTCATCGGGGG TTATATCATTTTTTG TERM 2404 2198388 - 2198415 + T 100 -15.6 -3.74447 | opp_overlap 2198388, overlap 2198383 2198382 GTCTGTAAAAGAAAA CCCCCGATCAGC GGCT GCTCATCGGGGG TTATATCATTTTTTG adhE 2201148 - 2198473 - | bifunctional acetaldehyde-CoA/alcohol dehydrogenase TERM 2405 2199357 - 2199392 + g 77 -9.1 -4.10007 | opp_overlap 2199368, overlap 2199368 AACCGGTACCTGATG TGGTTGTAATAGCGA CCAATT TCGCTTTTACACCCA TTTTCGGGAACTTAT TERM 2406 2200670 - 2200704 + g 83 -8.7 -4.33621 | gap 2, opp_overlap 2200656 2200655, overlap 2200699 TCCGCTGGCGCACCT GCTGC-GATAGCG-GCT TGA AGCACGATATCCGCAGC TTTATTGGTTGCGTC YP_1977 2201362 - 2201571 + | hypothetical protein TERM 2407 2201915 - 2201925 + F 74 -4 -5.08088 | overlap 2201909 GTTATAATGCACTGT TATC GGT GATA TTTTTATTAGCAATT marC1 2201955 - 2202599 + | hypothetical protein TERM 2408 2202620 - 2202655 + F 80 -2.6 -5.49809 | gap 1, overlap 2202621 ACCATTCAGAATTTT CGAG-AGGCCACTGA ACTATTC TTGGTGGCCTTCTCC TTTTTTTCCGCTTTG TERM 2409 2203025 - 2203012 - f 73 -2.5 -5.24531 | ATTCTGCATAAAAAA TATTT TAGT AAATA AATTCAATATGTTAT oppA3 2203437 - 2205074 + | periplasmic oligopeptide-binding protein precursor oppB 2205161 - 2206081 + | oligopeptide transporter permease oppC 2206100 - 2207005 + | oligopeptide transport system permease protein TERM 2410 2207478 - 2207468 - g 70 -3.2 -4.7497 | TTGATGCAGTAAAAA TGCC CGA AGCA CGTAAACGTATGCGC oppD 2207017 - 2208018 + | oligopeptide transporter ATP-binding component TERM 2411 2208977 - 2208987 + G 70 -8.2 -3.794 | ATTAGAAGGGAGTTT CCGC CAC GCGG TTTCGTGCCTTAAAG oppF2 2208015 - 2209016 + | oligopeptide transport ATP-binding protein TERM 2412 2209477 - 2209493 + F 77 -4.5 -5.05228 | opp_overlap 2209440 2209477 2209472 ATTGACGAATTAAAA CATATTA AGT TAATGTG TTTTTGTCATTTAAT YP_1984 2209577 - 2209792 + | hypothetical protein TERM 2413 2209884 - 2209917 + T 100 -16.9 -3.80114 | overlap 2209885 GAGCTGCTCTTGCTC ACCTCAGTCACTTAG TTAT CTAAGTGACTGAGGA TTTACTCGATTGCTG TERM 2414 2209885 - 2209916 + T 100 -20.4 -2.87586 | overlap 2209884 AGCTGCTCTTGCTCA CCTCAGTCACTTAG TTAT CTAAGTGACTGAGG ATTTACTCGATTGCT TERM 2415 2210033 - 2210065 + T 71 -9.1 -3.31416 | opp_overlap 2210032 2210034, overlap 2210036 AAGGATAATTAAGAT ACATTGCCCCGGGGT TGA ACTATGGGGCAATGA TTAACTCTTTATTTT TERM 2416 2210036 - 2210062 + T 70 -9.4 -2.8084 | opp_overlap 2210034 2210032, overlap 2210033 GATAATTAAGATACA TTGCCCCGGGGT TGA ACTATGGGGCAA TGATTAACTCTTTAT YP_1985 2210414 - 2210091 - | dsDNA-mimic protein cls 2212060 - 2210579 - | cardiolipin synthetase YP_1987 2212356 - 2212108 - | hypothetical protein TERM 2417 2212258 - 2212284 + g 78 -10.1 -3.82218 | gap 1, opp_overlap 2212246, overlap 2212252 2212257 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCTCTGCCT TERM 2418 2212679 - 2212695 + H 100 -8.7 -5.48213 | opp_overlap 2212678 2212681 ATTATGGTAATAAGG CAGTCTC TAT GAGGCTG TTTTTGTTTTGAATC ail1 2213086 - 2213625 + | attachment invasion locus protein precursor YP_1989 2213846 - 2214109 + | hypothetical protein TERM 2419 2214192 - 2214153 - T 100 -11 -6.15536 | opp_overlap 2214155 2214157 2214160 2214163, overlap 2214154 2214155 AATTAACAAAAAAAA CTTATAATAATACGCCTA GCTT TAGGCGTATTATTATATC TAGTGTCTACAACCG TERM 2420 2214191 - 2214154 - T 100 -14.5 -4.25661 | opp_overlap 2214155 2214157 2214160 2214163, overlap 2214153 2214155 ATTAACAAAAAAAAC TTATAATAATACGCCTA GCTT TAGGCGTATTATTATAT CTAGTGTCTACAACC TERM 2421 2214155 - 2214190 + T 100 -18 -2.88999 | opp_overlap 2214155 2214154 2214153, overlap 2214157 2214160 2214163 TTAACAAAAAAAACT TATAATAATACGCCTA GCTT TAGGCGTATTATTATA TCTAGTGTCTACAAC TERM 2422 2214190 - 2214155 - T 100 -18 -3.12957 | opp_overlap 2214155 2214157 2214160 2214163, overlap 2214154 2214153 TTAACAAAAAAAACT TATAATAATACGCCTA GCTT TAGGCGTATTATTATA TCTAGTGTCTACAAC TERM 2423 2214157 - 2214188 + T 100 -16.2 -2.99545 | opp_overlap 2214155 2214154 2214153, overlap 2214155 2214160 2214163 AACAAAAAAAACTTA TAATAATACGCCTA GCTT TAGGCGTATTATTA TATCTAGTGTCTACA TERM 2424 2214160 - 2214185 + T 100 -13.5 -3.63762 | opp_overlap 2214155 2214154 2214153, overlap 2214157 2214155 2214163 AAAAAAAACTTATAA TAATACGCCTA GCTT TAGGCGTATTA TTATATCTAGTGTCT TERM 2425 2214163 - 2214182 + T 90 -10.8 -3.94067 | opp_overlap 2214155 2214154 2214153, overlap 2214160 2214157 2214155 AAAAACTTATAATAA TACGCCTA GCTT TAGGCGTA TTATTATATCTAGTG YP_1990 2214479 - 2214225 - | hypothetical protein YP_1991 2214989 - 2214693 - | YciI-like protein tonB 2215290 - 2216048 + | transport protein TonB TERM 2426 2216110 - 2216089 - T 84 -10.1 -3.74693 | TGCCACCGTATTAAA GGTGATCGC TCAG GCGGTCACC GAACTCGATAATAAA YP_1993 2217292 - 2216084 - | transposase for the IS285 insertion element TERM 2427 2217393 - 2217410 + r 100 -14.1 -4.12603 | CTGTCACCAACCTCA GGGCCGC TTTT GCGGCCC TTCTTGTTTGATCAA YP_1994 2217889 - 2217440 - | acyl-CoA thioester hydrolase ispZ 2218511 - 2217969 - | intracellular septation protein A TERM 2428 2220522 - 2220544 + r 100 -16.4 -4.68593 | TGTCTACAGTTTGAA CGCCTGATGT AAT ACATCAGGCG TTTTTGAATGATACA YP_1997 2221367 - 2220597 - | hypothetical protein YP_1998 2221529 - 2221744 + | hypothetical protein TERM 2429 2221795 - 2221775 - f 73 -8.4 -3.57715 | AAAAGATACGAAAGA TGTGATCT CGATT AGATCACA AATACTCATTTGTAG TERM 2430 2221846 - 2221798 - f 100 -13.6 -4.03078 | gap 1, overlap 2221800 2221801 CGATTAGATCACAAA TACTCATTTGTAGGTATATTCAC CCCC GTAAATATACCTACAAATG-GAA TGGATAATGAAAAAA TERM 2431 2221844 - 2221800 - f 100 -16.2 -3.60505 | gap 1, overlap 2221798 2221801 ATTAGATCACAAATA CTCATTTGTAGGTATATTCAC CCCC GTAAATATACCTACAAATG-G AATGGATAATGAAAA TERM 2432 2221844 - 2221801 - f 100 -16.4 -2.7558 | overlap 2221800 2221798 TTAGATCACAAATAC TCATTTGTAGGTATATTCAC CCCC GTAAATATACCTACAAATGG AATGGATAATGAAAA ompW 2221841 - 2222488 + | outer membrane protein W TERM 2433 2222598 - 2222630 + T 89 -7 -5.30155 | gap 1, opp_overlap 2222604, overlap 2222602 2222604 CATCAGTTAGGCGGG CAGTAAGGAGGTGCG GTTA TGCGCCTCC-TCCTG TTTTTTACTTAATCA TERM 2434 2222604 - 2222625 + T 74 -10.1 -3.11487 | opp_overlap 2222604, overlap 2222602 2222598 TTAGGCGGGCAGTAA GGAGGTGCG GTTA TGCGCCTCC TCCTGTTTTTTACTT osmY1 2222949 - 2222635 - | putative lipoprotein TERM 2435 2223203 - 2223171 - R 76 -7.8 -4.13343 | overlap 2223173 AGAAATGGCTGAAAA TAGCGCCTGTTT CATGTAAAC AAACAGGCGCTG AAGGGCGGTAATGAC TERM 2436 2223201 - 2223173 - R 82 -10.4 -3.65832 | overlap 2223171 AAATGGCTGAAAATA GCGCCTGTTT CATGTAAAC AAACAGGCGC TGAAGGGCGGTAATG TERM 2437 2223298 - 2223309 + r 72 -7.2 -3.91196 | opp_overlap 2223295 AAATAATAACTAGCT GCGG GTTG CCGC TTTCATCTCTGTGAC trpA 2224098 - 2223292 - | tryptophan synthase subunit alpha TERM 2438 2223418 - 2223435 + g 79 -8.3 -4.4078 | opp_overlap 2223407 2223410 AATAGCACCCGCCGC GCCCGCC GCCA GGCTGGC TTTTACTTGCGCGGG trpB 2225288 - 2224098 - | tryptophan synthase subunit beta trpC 2226872 - 2225445 - | bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase trpD 2227874 - 2226876 - | anthranilate phosphoribosyltransferase TERM 2439 2227050 - 2227068 + g 73 -5.2 -4.63932 | opp_overlap 2227050 TTTACCTTGTAACAA CCGTGCTA AAA TGTCACGG TTTTCTTCCGGCATA TERM 2440 2227801 - 2227819 + g 71 -5.3 -4.46854 | gap 1 TCACCACGTACAATC GCC-GCAA ACAG TTGCTGGC TTTCTTCTTGGCTCA trpG 2228467 - 2227889 - | anthranilate synthase component II trpE2 2230032 - 2228467 - | anthranilate synthase component I TERM 2441 2230108 - 2230094 - R 100 -11.4 -5.64274 | CTATCCATAAAAAAA CCCGCT ATT AGCGGG CTGAAGCAATCTGCA YP_2007 2230210 - 2230148 - | putative trp operon leader peptide trpH 2230484 - 2231383 + | hypothetical protein sUA5B 2231400 - 2232020 + | hypothetical protein TERM 2442 2232199 - 2232184 - f 83 -9 -4.16681 | AATATTAGTGTAAAA TGTCCG GCCA CGGACA AGTGTGTGTGCCAGT TERM 2443 2233116 - 2233094 - g 70 -9 -3.55801 | ATTAATTTGCCGAAA GGCCTGCCAC GGG GTGGCTGGAC TGAACTGGATCTTAA rsuA3 2232350 - 2233384 + | 23S rRNA pseudouridylate synthase B TERM 2444 2233449 - 2233486 + T 75 -5.7 -4.63542 | gap 1, opp_overlap 2233449 2233450, overlap 2233453 TAGCGACGTGAATAA TGCTTATTGCCGCAGTTT TTT GGACTGCGGCAATAT-TA TTTTTAACGCTTATA TERM 2445 2233453 - 2233483 + T 100 -15.6 -4.42235 | opp_overlap 2233449 2233450, overlap 2233449 GACGTGAATAATGCT TATTGCCGCAGTTT TTT GGACTGCGGCAATA TTATTTTTAACGCTT btuR 2234097 - 2233507 - | cob(I)yrinic acid a,c-diamide adenosyltransferase fabG9 2234962 - 2234114 - | short chain dehydrogenase TERM 2446 2234258 - 2234271 + g 76 -8.1 -4.21439 | overlap 2234266 ATCTTCATCGGGGAA TGCGG TCGC CCGCA TTTGTGTTCGGGTTC TERM 2447 2235385 - 2235420 + G 85 -12.8 -3.67 | gap 1, overlap 2235383 2235389 AGGGAGCATTGGGGC GCAGGAGGTCTCTTCAT TAC GTGAAGAGATCTC-TGC TATTTTGGCCGTTGC TERM 2448 2235389 - 2235417 + G 80 -13.3 -2.93891 | overlap 2235385 2235383 AGCATTGGGGCGCAG GAGGTCTCTTCAT TAC GTGAAGAGATCTC TGCTATTTTGGCCGT TERM 2449 2235570 - 2235582 + G 77 -10.5 -3.54951 | opp_overlap 2235567, overlap 2235581 CGGTTGATAAAGTTG CCGCC AGT GGCGG TTATATGATGGCCTG sohB 2235047 - 2236093 + | putative periplasmic protease TERM 2450 2236156 - 2236125 - Tf 73 -7.3 -4.18488 | opp_overlap 2236125 2236126, overlap 2236126 AGTGATGGCAATAAA TGCAGGGGGTA ATCTGAACGG TACCCCCTGCT ATTTGCTACCAACCC TERM 2451 2236126 - 2236155 + TF 83 -10.8 -3.44848 | gap 1, opp_overlap 2236126 2236125, overlap 2236125 GTGATGGCAATAAAT GCAGGGGGTAATC TGAAC GGT-ACCCCCTGC TATTTGCTACCAACC TERM 2452 2236155 - 2236126 - Tf 79 -10.8 -3.10611 | opp_overlap 2236125 2236126, overlap 2236125 GTGATGGCAATAAAT GCAGGGGGTA ATCTGAACGG TACCCCCTGC TATTTGCTACCAACC YP_2014 2236463 - 2236212 - | hypothetical protein YP_2015 2236448 - 2236855 + | hypothetical protein TERM 2453 2236859 - 2236845 - fH 80 -5 -5.13344 | overlap 2236846 ACAGCAAGATAAAAA CCTTCT TTT AGAAGA AATAATTTAGGTAAA TERM 2454 2237107 - 2237091 - g 76 -6.5 -4.55446 | GAAGAAAGACGAAAA GGTTGCC TTA GTCAACC GTATGGGGGTCGATC TERM 2455 2237821 - 2237810 - g 87 -4.4 -5.40072 | TTGGTGTGAAAAAAA CCAT GATG ATGG CACAGCGCCTGTATG topA2 2236882 - 2239497 + | DNA topoisomerase I TERM 2456 2239558 - 2239574 + F 100 -9.4 -5.46657 | opp_overlap 2239557 2239558 CTGACCTCGGTAAAG CCAGCC TTCGC GGCTGG TTTTTTATTGGGCTA cysB 2239894 - 2240868 + | transcriptional regulator CysB YP_2018 2241204 - 2242061 + | hypothetical protein TERM 2457 2242497 - 2242515 + G 77 -11.7 -3.11768 | opp_overlap 2242495 TATTACTACTACAGC CTGCCGC AATTG GCGGCAG TGTTGGGTGATATCA acnA 2242425 - 2245097 + | aconitate hydratase TERM 2458 2245203 - 2245229 + T 91 -10.2 -4.16033 | opp_overlap 2245203 TTATCAGCCTCTAAA GGGTAGGTATAA TTA TTGAACCTACCC TTATTCTTATTTCGC ribA 2245863 - 2245261 - | GTP cyclohydrolase II TERM 2459 2245374 - 2245390 + g 70 -4.3 -4.70626 | overlap 2245386 2245389 TATTGATCCCCGCTT GGGTGAG GAT CTCGACC TTTTTAGGGTTGTTG TERM 2460 2245822 - 2245801 - G 72 -3.7 -4.77438 | opp_overlap 2245806, overlap 2245803 ACCGACCATTAAAAA GTCACCC CAAGGAGT GGGTAAC TTTGCTTCTGCTACA YP_2021 2246071 - 2246226 + | hypothetical protein pgpB5 2246357 - 2247118 + | phosphatidylglycerophosphatase B YP_2023 2247275 - 2247598 + | hypothetical protein TERM 2461 2248230 - 2248220 - g 74 -2.4 -5.08824 | overlap 2248221 GGGTTACTGAAAAAA GCGG CAA CGGC GGATAAACAATGTGC YP_2024 2247605 - 2248774 + | hypothetical protein TERM 2462 2248861 - 2248842 - T 71 -10 -2.63073 | opp_overlap 2248842 2248841, overlap 2248841 2248839 CTTTGCTAATAAGAT CGGGTGAA CGGG TCCACCCG GTTGTTAGCTGTTGT YP_2025 2249198 - 2248896 - | hypothetical protein pyrF 2249664 - 2250401 + | orotidine 5'-phosphate decarboxylase sUI1 2250401 - 2250727 + | translation initiation factor Sui1 TERM 2463 2250795 - 2250758 - T 95 -13.8 -2.87132 | gap 1, opp_overlap 2250758 2250763, overlap 2250763 TTTTCCGCGCAGATA TAAAATACGGCGT-TGA TATTG TCAAACGCCGTATTTTA TTTAGAACTTCTAAT TERM 2464 2250758 - 2250795 + T 100 -14.5 -3.62859 | gap 1, opp_overlap 2250758 2250763, overlap 2250763 TTTTCCGCGCAGATA TAAAATACGGCGT-TGAT ATT GTCAAACGCCGTATTTTA TTTAGAACTTCTAAT TERM 2465 2250790 - 2250763 - T 100 -9.3 -4.60797 | gap 1, opp_overlap 2250758 2250763, overlap 2250758 CGCGCAGATATAAAA TACGGCGT-TGA TATTG TCAAACGCCGTA TTTTATTTAGAACTT TERM 2466 2250763 - 2250790 + T 100 -10 -4.88405 | gap 1, opp_overlap 2250763 2250758, overlap 2250758 CGCGCAGATATAAAA TACGGCGT-TGAT ATT GTCAAACGCCGTA TTTTATTTAGAACTT osmB 2251199 - 2250984 - | lipoprotein araD 2251679 - 2252374 + | L-ribulose-5-phosphate 4-epimerase TERM 2467 2252396 - 2252417 + T 70 -5.1 -4.56597 | AACATAAATAATGAG CCCGTGT TCAGTCTT GCACGGG TTTTTCCAGCCAGAG YP_2030 2252651 - 2252403 - | hypothetical protein mipB 2252985 - 2253650 + | fructose-6-phosphate aldolase TERM 2468 2253736 - 2253706 - T 100 -13.5 -4.18506 | overlap 2253692 2253709 TGAGCGGTAAAAGAA TAACGCCCTATAA AATCA CTATAGGGCGTTA CGGTGTCACTAATTT TERM 2469 2253733 - 2253709 - T 93 -10.8 -4.20868 | overlap 2253692 2253706 GCGGTAAAAGAATAA CGCCCTATAA AATCA CTATAGGGCG TTACGGTGTCACTAA YP_2032 2254096 - 2253767 - | hypothetical protein cstA1 2256131 - 2254065 - | carbon starvation protein TERM 2470 2254321 - 2254331 + gr 73 -5.4 -4.74132 | opp_overlap 2254321 GCTTGAGCAAGGAAG CCAA TAC TTGG TTTTTCATGGAATAT TERM 2471 2254847 - 2254867 + gr 70 -7.5 -3.89346 | overlap 2254849 2254850 AGTTTTCACCAACAT CTTTGGCGA CCA TCGCCAGTG TTTCTGGCGTAACGA TERM 2472 2254849 - 2254865 + gr 73 -8.7 -3.53733 | overlap 2254847 2254850 TTTTCACCAACATCT TTGGCGA CCA TCGCCAG TGTTTCTGGCGTAAC TERM 2473 2254850 - 2254864 + gr 71 -10 -2.71918 | overlap 2254849 2254847 TTTCACCAACATCTT TGGCGA CCA TCGCCA GTGTTTCTGGCGTAA TERM 2474 2256427 - 2256462 + r 71 -9.6 -3.03124 | opp_overlap 2256432, overlap 2256432 GCAAACATAACATTA AAAAAGCCGTCGGGGG AATT CCTCCGACGGCTATCA TGTTAAAACATAAGA TERM 2475 2256432 - 2256457 + r 100 -18.3 -2.9155 | opp_overlap 2256432, overlap 2256427 CATAACATTAAAAAA GCCGTCGGGGG AATT CCTCCGACGGC TATCATGTTAAAACA TERM 2476 2256457 - 2256432 - R 100 -16.1 -5.30189 | opp_overlap 2256432 2256427 CATAACATTAAAAAA GCCGTCGGGGG AATT CCTCCGACGGC TATCATGTTAAAACA rnb 2258415 - 2256481 - | exoribonuclease II TERM 2477 2257990 - 2258001 + g 76 -7.2 -4.2828 | opp_overlap 2257990 TAGGTCAGCCTGAAA GGCG CGGT CGCC TTTTAATGGGTGGCG TERM 2478 2258183 - 2258173 - G 70 -3.2 -4.86033 | AAAGCGGGATAAAAA TGGC TCA ACCA ATGTTTCAGGTTCAG TERM 2479 2259169 - 2259140 - g 86 -6.5 -4.95547 | gap 1, opp_overlap 2259143 2259157, overlap 2259143 GTTACAAGAAGAAAA TAATGCC-TACCGT AAA ACGGTATGGCATCT CTTGCCGCTACTGAT TERM 2480 2259166 - 2259143 - g 91 -10.4 -4.55653 | gap 1, opp_overlap 2259143 2259157, overlap 2259140 ACAAGAAGAAAATAA TGCC-TACCGT AAA ACGGTATGGCA TCTCTTGCCGCTACT TERM 2481 2259143 - 2259166 + G 71 -10.4 -3.08073 | gap 1, opp_overlap 2259140 2259143, overlap 2259157 ACAAGAAGAAAATAA TGCC-TACCGT AAA ACGGTATGGCA TCTCTTGCCGCTACT proP23 2259084 - 2260394 + | putative integral membrane protein TERM 2482 2260912 - 2260894 - g 70 -4.6 -4.66609 | opp_overlap 2260894 2260898 TATGGTACGCAAAAA GCATTAAA CGA TTTATTGC TGTCTGATTACAGCC wcaG8 2260429 - 2261430 + | hypothetical protein nth 2262254 - 2261613 - | endonuclease III TERM 2483 2262220 - 2262239 + g 85 -3.5 -5.48514 | TTGTTATCCCGCAGA CGGGTCA AAATAG TGACACG TTTTTCTTTATTCAT nqrD2 2262952 - 2262251 - | SoxR-reducing system protein RsxE TERM 2484 2262829 - 2262808 - G 70 -8.7 -3.59202 | TATTGGTACACACAA GGACTAGCG TGGT CGCTAACCC CAGCCCCAATGCGTT TERM 2485 2262922 - 2262935 + g 70 -3.1 -4.75174 | TATTTTTCCACAACC CTTGT GCTA ACAGG TTTTTCGCTTCACTC nqrC2 2263578 - 2262949 - | electron transport complex protein RnfG rnfD 2264745 - 2263588 - | electron transport complex protein RnfD TERM 2486 2265493 - 2265471 - g 90 -8.4 -5.03314 | overlap 2265473 CGTACCTTTAAAAAA CGGTTTGGCG TGA CACCAAACAG CTTCCGCCAGATGAA araC4 2265171 - 2266076 + | AraC family transcriptional regulator nqrA2 2268160 - 2266181 - | electron transport complex protein RnfC TERM 2487 2267161 - 2267191 + g 77 -9.8 -3.6682 | opp_overlap 2267156 CCCCCATAATCACCA TTGGCGGGTTTTGA GGC TTGAAACCGGCCAA TTTAAGTAAATACAG TERM 2488 2267785 - 2267797 + g 70 -9.1 -3.61398 | CGCGCTGGCGATAGT CAGCC CAC GGCTG TTGTTCACGCCAGCG YP_2043 2268776 - 2268210 - | electron transport complex protein RnfB TERM 2489 2268538 - 2268557 + g 86 -9.2 -4.54301 | AGTTTCAGCATCACC TGCTCGCC ACCC GGCGCGCA TTTGTTGATTTTTTC nqrE3 2269357 - 2268776 - | Na(+)-translocating NADH-quinone reductase subunit E TERM 2490 2269410 - 2269385 - R 87 -5.4 -5.55855 | CCTAAAAAAATAAAA GCCGCCTATT ATCCAA AATTGACGGC CCGACGACAACAGAT YP_2045 2269928 - 2269485 - | hypothetical protein TERM 2491 2269555 - 2269544 - G 80 -4.4 -5.1963 | overlap 2269546 TGTAAGGAACAAAAA TAGC TGCA GCTA GCAGCGGCCACCCGA TERM 2492 2269560 - 2269546 - G 71 -7.1 -4.21997 | overlap 2269544 TAAGGAACAAAAATA GCTGC AGCTA GCAGC GGCCACCCGAGTGTT TERM 2493 2271183 - 2271167 - H 76 -10.9 -2.59793 | overlap 2271166 2271164 TGAGTTAGATAATAT CCGTGAT TTC ATCACGG GTTCGGCCCTGACAT TERM 2494 2271362 - 2271377 + H 81 -7.5 -4.65895 | overlap 2271351 TCTCTGTGGTTTTGC CGCGC AAAACG GCGCG TTTTTGACTGAAACG sunT-2 2273849 - 2275987 + | putative toxin transport protein TERM 2495 2276113 - 2276129 + T 70 -5.1 -4.49311 | opp_overlap 2276075 2276071, overlap 2276077 2276114 CAGGCCTCTGAGGGT GTCGCTA TCA TAGCGAA TTTTATAATACTGAT araA 2277679 - 2276177 - | L-arabinose isomerase araB1 2279466 - 2277763 - | ribulokinase TERM 2496 2280121 - 2280079 - g 74 -6.8 -4.38712 | CCGATGGTGAGAAAA CCCTGAACGCCATCGACAGC CTG GCGGCCAGTGGTGCCCAAGG TTTTGTTATTTGTAC araF 2279874 - 2280857 + | L-arabinose-binding periplasmic protein precursor TERM 2497 2282119 - 2282106 - g 70 -8.1 -3.71848 | CTGTCTGATTAACAA CCGCT GGGA AGCGG ATAATGCGTTGCTGC araG 2280955 - 2282526 + | L-arabinose transporter ATP-binding protein araH 2282544 - 2283593 + | L-arabinose transporter permease protein TERM 2498 2285802 - 2285786 - g 80 -2.2 -5.49569 | GATCAACAGAAAAAA GCACTG CCGAT CATTGC TAAAAATTGATGTTT mviM4 2284763 - 2285812 + | putative oxidoreductase TERM 2499 2285857 - 2285884 + F 100 -7.8 -6.32976 | gap 1, opp_overlap 2285855 2285870 AGGGTGGAAATATCT CTCTGGG-CAC AATCTCC GTGGCCCAGAG TTTTTTTATTTTTTT TERM 2500 2286617 - 2286597 - g 90 -6.1 -5.27923 | opp_overlap 2286597, overlap 2286599 GAACGGCACAAAAAA CTGGTCAAT ATC ACTGACCGG TCATCTATTTTGTTG YP_2056 2286006 - 2287034 + | hypothetical protein YP_2057 2287015 - 2287173 + | hypothetical protein TERM 2501 2287390 - 2287378 - g 100 -4.8 -5.98781 | GATAATGAAAAAAAA CTGC ATATA GCAG AAATAGATAAAGGTA YP_2058 2287240 - 2287839 + | hypothetical protein TERM 2502 2287865 - 2287836 - T 91 -13.7 -2.51657 | opp_overlap 2287842, overlap 2287842 AAAGAGAATAGAGAT TTAAAACGGAGCC AATG GGCTCCGTTTTTA TCAAACAAATATAAT TERM 2503 2287859 - 2287842 - T 100 -12.7 -4.27861 | opp_overlap 2287842, overlap 2287836 AATAGAGATTTAAAA CGGAGCC AATG GGCTCCG TTTTTATCAAACAAA TERM 2504 2287842 - 2287859 + T 100 -12.7 -4.82901 | opp_overlap 2287836 2287842 AATAGAGATTTAAAA CGGAGCC AATG GGCTCCG TTTTTATCAAACAAA YP_2059 2289507 - 2287888 - | hypothetical protein TERM 2505 2288246 - 2288256 + g 79 -5.4 -5.00616 | ATTGGAATGCTCAGG TTGG CGT CCAA TTTTTTCACCGCGGG TERM 2506 2288331 - 2288349 + g 74 -7.4 -4.13748 | TCAGTTCGATATTCA GGGTAAAG GTA CTTTCCCC TTTAGTATTTTTCCA TERM 2507 2289545 - 2289532 - R 71 -3.1 -5.07107 | GAAATCCCCAAAAAA GAAGA TATA TCTCC CAAATAATATAGGCC manA 2290847 - 2289672 - | mannose-6-phosphate isomerase TERM 2508 2290490 - 2290509 + g 70 -2.8 -4.86731 | gap 1, overlap 2290493 TGCGCTCAGCCGCAT CCA-GTGGG ATA CCTGCCTGG TTTTCTTTAGCAAAA fumC 2291131 - 2292528 + | fumarate hydratase TERM 2509 2292551 - 2292571 + T 79 -6.8 -4.62783 | opp_overlap 2292551 ACATTGTTATATTAA CGCCGG GGTGGATTA CCGGCG TTTTTACAGTGGCTA tus 2293582 - 2292608 - | DNA replication terminus site-binding protein TERM 2510 2292953 - 2292966 + g 82 -3.7 -5.29782 | TGGAGGAACAGCTCG GCCAG CATT CAGGC TTTTTTCTAGCTGTA TERM 2511 2294664 - 2294651 - H 87 -5.3 -5.47846 | overlap 2294658 AAGGAAAAAAGAAAA CACAT GATT ATGTG CAGCAAATCACATAA mlc 2294804 - 2296021 + | ROK family transcriptional regulatory protein TERM 2512 2296056 - 2296032 - f 75 -10.3 -2.84602 | opp_overlap 2296036 2296039, overlap 2296031 2296039 GCTAGTGTATTAAAT CTAATAATTAA GAG TTAATTATTAG TGGGTACCTTCGGTC bioD2 2296221 - 2296913 + | putative dethiobiotin synthetase eriC2 2298317 - 2297073 - | putative voltage-gated ClC-type chloride channel ClcB TERM 2513 2297622 - 2297608 - G 74 -4.9 -4.85782 | GCTTTTAAAAATAAA GGGCC GCTGA AGCCC GCCATTAATCCTAGA galR1 2299969 - 2298953 - | LacI family transcriptional regulatory protein YP_2068 2300506 - 2300033 - | hypothetical protein YP_2070 2301089 - 2301322 + | hypothetical protein TERM 2514 2301705 - 2301680 - g 70 -10.5 -3.01708 | gap 1, opp_overlap 2301680 2301679 CAAAGGGGATAGATA TTGCTCCCGCAA TCG TCGCGGG-GCAA ATTGATATAGCGGCC TERM 2515 2302171 - 2302150 - g 75 -8.7 -3.93583 | GAAGCCATGTATAAA GAGAAGCCA GAGG TGGCTGCTC GCGTACTTAAACTGT tauA2 2301436 - 2302467 + | ABC-type nitrate/sulfonate/taurine/bicarbonate transport systems, periplasmic components TERM 2516 2302876 - 2302896 + G 95 -2.3 -5.86965 | overlap 2302877 GCGATGCTGTGGTTC GGCCTGGGG AAT CCGCCGGCA TTTTTTTTGATAAGT tauC2 2302471 - 2303292 + | putative transport system permease TERM 2517 2303427 - 2303439 + G 71 -6.3 -4.29493 | AATAAATCTTCATAT TTCAC ATG GTGAA TTTGTCTGTTTACTG tauB2 2303302 - 2304120 + | taurine ATP-binding component of a transport system TERM 2518 2304493 - 2304526 + T 100 -10.3 -4.74453 | gap 1, opp_overlap 2304494 2304496, overlap 2304496 AGCTCTCTCAATTCA ATACGCAGGCGG-TGA TCA TCATCCGCCTGCGTTG TTTTTCAATCTATTC TERM 2519 2304525 - 2304494 - T 100 -13.8 -3.17075 | gap 1, opp_overlap 2304493 2304496, overlap 2304496 GCTCTCTCAATTCAA TACGCAGGCGG-TGA TCA TCATCCGCCTGCGTT GTTTTTCAATCTATT TERM 2520 2304496 - 2304523 + T 100 -16.4 -4.46215 | gap 1, opp_overlap 2304496 2304494, overlap 2304493 TCTCTCAATTCAATA CGCAGGCGG-TGA TCA TCATCCGCCTGCG TTGTTTTTCAATCTA TERM 2521 2304523 - 2304496 - T 100 -16.4 -3.14878 | gap 1, opp_overlap 2304493 2304496, overlap 2304494 TCTCTCAATTCAATA CGCAGGCGG-TGA TCA TCATCCGCCTGCG TTGTTTTTCAATCTA amn 2306053 - 2304545 - | AMP nucleosidase TERM 2522 2305202 - 2305228 + g 73 -3 -5.00616 | overlap 2305204 CTGCCCATTTTTGGC TATCAGGTGATA GGC TGGCATCTGATG TTTTTTCCACGCCAG TERM 2523 2305551 - 2305569 + g 90 -11.8 -4.09243 | ATCGTTTCAATTCCG TCGGTGAT GCC ATCACCGA TTTTAGCCAGATCTG TERM 2524 2306579 - 2306559 - g 72 -3.9 -4.77925 | overlap 2306560 AAAAAATCGGAAAAA GCCGCACAA CAG TTGTTCGGG GCATTACTCGCGAAA TERM 2525 2306820 - 2306806 - g 73 -5.6 -4.62904 | opp_overlap 2306813 AAATACGGGCAAAAA CGGTTG TCA CACCCG CAGCGGTTGAGTTAT YP_2075 2306241 - 2307674 + | putative virulence factor TERM 2526 2307737 - 2307749 + G 79 -7.7 -4.54727 | overlap 2307724 TTCAGGATAGTGGGA TCCAG TTC CTGGA TTTTGCTTTAACGCC TERM 2527 2307869 - 2307889 + G 76 -11.1 -3.30243 | AATATTCACTGATGC TCCCAGGGG CAG CCCCTGAGA TTGTGAAACCTGAAT YP_2076 2307661 - 2310750 + | putative virulence factor TERM 2528 2311250 - 2311276 + G 75 -9.4 -3.82604 | CGCCCGTGCTTTCTT GCTGGATTGCCC TCA GGAAAATCCAGC TTATTCGTTGGATGA YP_2077 2310747 - 2313287 + | putative virulence factor TERM 2529 2313359 - 2313333 - T 91 -7.9 -4.84017 | opp_overlap 2313333 AACGTGCCACAAAAA TGCGCAACTCC CCGAC GGAGAAGCGCA TTTTTTAAACAGCAG TERM 2530 2313333 - 2313359 + T 95 -7.9 -5.00616 | opp_overlap 2313333 AACGTGCCACAAAAA TGCGCAACTCC CCGAC GGAGAAGCGCA TTTTTTAAACAGCAG YP_2078 2314250 - 2313456 - | hypothetical protein TERM 2531 2314772 - 2314796 + H 100 -15 -4.96501 | gap 1, opp_overlap 2314772 AGAAAGATTCCCAAA CCCCGC-CGGC GCCA GCCGAGCGGGG TTTCTTTTTATCGCC TERM 2532 2314796 - 2314772 - H 100 -15 -3.6292 | gap 1, opp_overlap 2314772 AGAAAGATTCCCAAA CCCCGC-CGGC GCCA GCCGAGCGGGG TTTCTTTTTATCGCC TERM 2533 2315722 - 2315706 - g 77 -10.9 -3.59979 | TCGGGCCATCGGAAA GGCAGAA CAA TTCTGCC CTCATGCCAATATTA ilvB2 2314837 - 2316519 + | acetolactate synthase catalytic subunit ilvN 2316506 - 2316868 + | acetolactate synthase 1 regulatory subunit TERM 2534 2316876 - 2316918 + T 100 -15 -3.65046 | opp_overlap 2316865 2316864 2316886, overlap 2316877 AAAGGTGACGTTGTC ACACGTTAAACCCTGTCG TTACTGC CGACAGGGTTTAACGGGC TTATTCGAGTAGGGA TERM 2535 2316877 - 2316917 + T 100 -18.5 -2.78813 | opp_overlap 2316864 2316886, overlap 2316876 AAGGTGACGTTGTCA CACGTTAAACCCTGTCG TTACTGC CGACAGGGTTTAACGGG CTTATTCGAGTAGGG TERM 2536 2316908 - 2316886 - T 82 -10.6 -3.63627 | opp_overlap 2316877 2316876 TTGTCACACGTTAAA CCCTGTCG TTACTGC CGACAGGG TTTAACGGGCTTATT YP_2081 2317609 - 2316935 - | nucleotidase YP_2082 2320136 - 2317740 - | hypothetical protein TERM 2537 2320254 - 2320238 - R 71 -8.7 -3.39908 | CTTTTTTAAAACAGA CTGCCGT AAC ACAGCAG AAAAACCCATTAATT TERM 2538 2320657 - 2320635 - R 100 -9.9 -4.96646 | gap 1 GGACATAAGCAAAAA TCCCGGC-CA TTAC TGCGCCGGGA CGTTCCAGTGAGATA phoA 2322157 - 2320682 - | alkaline phosphatase ada2 2322482 - 2322886 + | methylated DNA-protein cysteine methyltransferase fnr 2322959 - 2323711 + | fumarate/nitrate reduction transcriptional regulator uspA1 2323866 - 2324804 + | universal stress protein UspE TERM 2539 2324865 - 2324842 - T 100 -13.2 -4.28049 | CGTAAAATCCTAAAA TAAGGGCCAC CGAA GTGGCCCTCA GACTGCTGACAAACC TERM 2540 2324951 - 2324925 - T 84 -10.1 -3.82218 | gap 1, opp_overlap 2324934, overlap 2324926 2324941 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 2541 2324952 - 2324926 - T 72 -10.1 -2.88849 | gap 1, opp_overlap 2324934, overlap 2324925 2324941 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT TERM 2542 2325051 - 2325024 - T 100 -15.6 -3.62046 | overlap 2325025 GCACTTTGTCAATAA CCTCAGGGCCAC CGAA GTGGCCCTGAGC AATACAATGGATGTT TERM 2543 2325050 - 2325025 - T 100 -19.1 -2.77013 | overlap 2325024 CACTTTGTCAATAAC CTCAGGGCCAC CGAA GTGGCCCTGAG CAATACAATGGATGT pntB 2326473 - 2325079 - | pyridine nucleotide transhydrogenase pntA 2328072 - 2326546 - | NAD(P) transhydrogenase subunit alpha TERM 2544 2327019 - 2327044 + g 76 -3.2 -5.19879 | CGCGAATCACGGTAT CGTCGAAATC AATATC GATCTCGCCG TTTTTCTCTTTGCAA YP_2089 2328396 - 2328193 - | hypothetical protein YP_2090 2328602 - 2329555 + | hypothetical protein TERM 2545 2329562 - 2329586 + F 82 -7.8 -4.4727 | overlap 2329565 TTCAAATAATTATCT TAAGGGCGGC CAAGT GCTGCCCTTC TTTTATCCGTGTTGC TERM 2546 2329565 - 2329583 + F 88 -9.5 -4.33785 | overlap 2329562 AAATAATTATCTTAA GGGCGGC CAAGT GCTGCCC TTCTTTTATCCGTGT TERM 2547 2330363 - 2330381 + G 80 -10.4 -3.68619 | GCATCGCATTTAGCC TCGATACT TTT AGTATCGA TTTCACTGGCTTAGC potE3 2329825 - 2331216 + | putative amino acid antiporter YP_2092 2331656 - 2331240 - | hypothetical protein TERM 2548 2331465 - 2331487 + g 82 -12 -3.646 | opp_overlap 2331452, overlap 2331466 TACTTGCAGCGCCAA TGCCGTAAGC TGA GCTTGCGGCG TTCTCTCTAATTCAG TERM 2549 2331466 - 2331486 + g 79 -13.3 -2.78278 | opp_overlap 2331452, overlap 2331465 ACTTGCAGCGCCAAT GCCGTAAGC TGA GCTTGCGGC GTTCTCTCTAATTCA rstA 2331899 - 2332699 + | DNA-binding transcriptional regulator RstA TERM 2550 2333590 - 2333608 + F 100 -13.2 -4.01078 | CCAGGGGGTAATCTG CTCTCCTG ATT CAGGAGAG TTTATGGTCACTTTT YP_2095 2333612 - 2334634 + | transposase for insertion sequence IS100 TERM 2551 2334715 - 2334701 - g 77 -11.4 -3.3506 | overlap 2334692 TGGAAAGCCTTATAA GCGCAG CGC CTGCGC TGTCACAACAGGCAG dnaC_17 2334631 - 2335413 + | transposase/IS protein YP_2097 2336058 - 2337557 + | putative carboxypeptidase TERM 2552 2337601 - 2337577 - T 100 -9.9 -4.43877 | opp_overlap 2337580, overlap 2337579 2337580 TAATTCGGAAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCATATGCGCCTAT TERM 2553 2337599 - 2337579 - T 100 -12.5 -3.81958 | opp_overlap 2337580, overlap 2337577 2337580 ATTCGGAAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 2554 2337598 - 2337580 - T 100 -16 -2.88452 | opp_overlap 2337580, overlap 2337579 2337577 TTCGGAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 2555 2337580 - 2337598 + T 100 -16 -4.8048 | opp_overlap 2337579 2337577 2337580 TTCGGAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC tnp_20 2338188 - 2337679 - | transposase for the IS1541 insertion element TERM 2556 2338268 - 2338250 - H 100 -16 -3.07307 | opp_overlap 2338250 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAT TERM 2557 2338250 - 2338268 + H 100 -16 -4.37092 | opp_overlap 2338250 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAT TERM 2558 2339608 - 2339596 - g 76 -4.7 -5.03314 | CTGACGCGGAAAAAA GCCTG AAC CTGGC CGGCGCGTGCGTCAG TERM 2559 2340748 - 2340735 - g 78 -3.8 -5.1861 | CTGAGGAGTAAAAAA TCCG GCGATA CGGA AACGGAAGGCCTGCA TERM 2560 2341022 - 2340997 - g 73 -6.1 -4.47328 | AAGCGGATTACAAAA CCGTCCGCTAC TCTG GTAAGGAACGG GATGCGACGGGGTTG rhsA1 2339106 - 2341730 + | putative insecticidal toxin complex gyrB1 2341733 - 2342089 + | DNA gyrase (topoisomerase II) B subunit TERM 2561 2342072 - 2342082 + T 75 -5.4 -4.78752 | ACTCCAGAACATAGT CCAA TTT TTGG TTTTTAAGTTGTAGT TERM 2562 2342148 - 2342117 - T 86 -10.4 -3.79043 | opp_overlap 2342121, overlap 2342136 CATTACTAACCGAAA GATAGTTATATTCA GAAA TGGATATAACTATC CTAAAAAATTCACAC TERM 2563 2342623 - 2342610 - T 74 -8.1 -3.95435 | GGGGTTAAAATATAA GTGGC GTAA GCCAC CGGAGCGCCCCGAGG TERM 2564 2342713 - 2342686 - T 78 -9.2 -3.61715 | opp_overlap 2342693, overlap 2342673 2342687 2342693 TAGCTTTTTCAATAA CCTCAAAGGAGC CAAA GCTCCTTTCAGA CTGCTGACAAACCCC TERM 2565 2342712 - 2342687 - T 75 -10.5 -2.76815 | opp_overlap 2342693, overlap 2342686 2342673 2342693 AGCTTTTTCAATAAC CTCAAAGGAGC CAAA GCTCCTTTCAG ACTGCTGACAAACCC TERM 2566 2342693 - 2342706 + T 70 -8.1 -3.58343 | opp_overlap 2342687 2342686 2342673 2342693 TTCAATAACCTCAAA GGAGC CAAA GCTCC TTTCAGACTGCTGAC TERM 2567 2342706 - 2342693 - T 70 -8.1 -3.72051 | opp_overlap 2342693, overlap 2342687 2342686 2342673 TTCAATAACCTCAAA GGAGC CAAA GCTCC TTTCAGACTGCTGAC TERM 2568 2342797 - 2342771 - T 84 -10.1 -3.82218 | gap 1, opp_overlap 2342780, overlap 2342772 2342787 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 2569 2342798 - 2342772 - T 72 -10.1 -2.88849 | gap 1, opp_overlap 2342780, overlap 2342771 2342787 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT TERM 2570 2342891 - 2342878 - T 70 -8.1 -3.72051 | opp_overlap 2342878, overlap 2342888 GTCAATAACCTCAAA GGAGC CAAA GCTCC TTTTTATAAGGTGAC TERM 2571 2342878 - 2342891 + T 91 -8.1 -4.85599 | opp_overlap 2342878 2342888 GTCAATAACCTCAAA GGAGC CAAA GCTCC TTTTTATAAGGTGAC YP_2102 2343494 - 2342916 - | hypothetical protein cybB2 2344074 - 2343520 - | hypothetical protein YP_2104 2344469 - 2344681 + | hypothetical protein asr1 2344678 - 2344974 + | acid shock protein TERM 2572 2345042 - 2345059 + F 100 -12.7 -5.24531 | opp_overlap 2345042 2345044 AAATGATTCACTCAA CACCCGG TTCT CCGGGTG TTTTTTATCAGGAGT TERM 2573 2345059 - 2345042 - f 93 -12.7 -3.09208 | opp_overlap 2345042, overlap 2345044 AAATGATTCACTCAA CACCCGG TTCT CCGGGTG TTTTTTATCAGGAGT TERM 2574 2345057 - 2345044 - f 72 -9.5 -3.10056 | opp_overlap 2345042, overlap 2345042 ATGATTCACTCAACA CCCGG TTCT CCGGG TGTTTTTTATCAGGA YP_2106 2345308 - 2346144 + | putative pepetidase hipB2 2346523 - 2346200 - | putative DNA-binding phage-related protein YP_2108 2346891 - 2346520 - | hypothetical protein TERM 2575 2347178 - 2347138 - R 100 -8.4 -5.48514 | gap 1, overlap 2347141 ACTAAGAAATAAAAA GAATTCGACGCCTAAGTCT AGAT AG-CTCAGGCGTCGAATAG GGGCATCAATCAGAC TERM 2576 2347175 - 2347141 - R 100 -14.5 -4.78345 | gap 1, overlap 2347138 AAGAAATAAAAAGAA TTCGACGCCTAAGTCT AGAT AG-CTCAGGCGTCGAA TAGGGGCATCAATCA hrpA 2351030 - 2347188 - | ATP-dependent RNA helicase HrpA TERM 2577 2348731 - 2348744 + g 76 -8.1 -4.19624 | opp_overlap 2348729 2348731 TCATCGACCAGAATA TCCCG CCGA CGGGA TTTGTGTTCCAACTC TERM 2578 2351392 - 2351373 - H 72 -6.4 -4.3351 | overlap 2351375 ATAAAATCGAACAAA GAGCGCAA AATA TTGCGCTA TCACTGGTAGCAAAA TERM 2579 2351390 - 2351375 - H 78 -9 -3.75005 | overlap 2351373 AAAATCGAACAAAGA GCGCAA AATA TTGCGC TATCACTGGTAGCAA acpD 2351476 - 2352081 + | azoreductase TERM 2580 2352180 - 2352197 + T 100 -14.1 -5.35222 | AGCCATGTGATGATT GCGCGCC AACC GGCGCGC TTTTTTATGCCTTTT deoR2 2353158 - 2352202 - | putative transcriptional regulatory protein TERM 2581 2353307 - 2353296 - H 70 -7.2 -3.86283 | TTAACCTACACGAAA GGGC AAAT GCCC AAATATTGAATTTAT TERM 2582 2354073 - 2354050 - g 73 -3.1 -5.00616 | gap 1, overlap 2354051 GGGTGTTGGAAAAAA CCGGTATCGT AGATA ACGCT-CCGG TGATGGGGGAATCAT dalD 2353368 - 2354759 + | putative mannitol dehydrogenase YP_2113 2355349 - 2354978 - | hypothetical protein YP_2114 2358246 - 2355550 - | hypothetical protein TERM 2583 2355884 - 2355870 - G 74 -11.4 -3.13908 | opp_overlap 2355867 AACGCAACCAGTCAA TCGCCG CAC CGGCGA CAGTATTGCTCTCAC ldhA1 2358455 - 2359504 + | D-lactate dehydrogenase hslJ 2359574 - 2360026 + | heat-inducible protein hlx 2360497 - 2360084 - | putative lipoprotein sapB 2360710 - 2361369 + | putative Mg(2+) transport ATPase qacE 2361767 - 2361429 - | quaternary ammonium compound-resistance protein TERM 2584 2364686 - 2364701 + G 75 -10.4 -3.40403 | opp_overlap 2364684 CGCTGTTCGAATATT CCGGAG CCTG CTCCGG TTGTGGTGAAACACC nifJ 2362240 - 2365773 + | putative pyruvate-flavodoxin oxidoreductase TERM 2585 2365808 - 2365833 + F 100 -13.4 -5.18995 | TGTGCGATTTACTGA GCCAGTTAGC TAAACC GCTAACTGGC TTTTTCTATTATCTT TERM 2586 2366118 - 2366108 - g 86 -8.2 -4.64144 | overlap 2366110 AACAAGCTGCAAAAA CGGC TGC GCCG TAACGTCGGCCAAGC TERM 2587 2366964 - 2366951 - g 74 -2.3 -5.09685 | GAAGACACAGAAAAA CGTCC ACCA GTACG CCTTGATGTGTTGGA mesJ1 2366048 - 2366989 + | C32 tRNA thiolase aes2 2367329 - 2368264 + | hypothetical protein TERM 2588 2368267 - 2368290 + F 71 -8.8 -3.38991 | opp_overlap 2368268 2368270, overlap 2368265 2368270 TCATAGCCAGTAAAA ATAGTGGGCC AAAT GGCCCACTGA TGTTATTGGCAAAGT TERM 2589 2368289 - 2368268 - f 100 -10.1 -4.76041 | opp_overlap 2368267 2368265 2368270, overlap 2368270 CATAGCCAGTAAAAA TAGTGGGCC AAAT GGCCCACTG ATGTTATTGGCAAAG TERM 2590 2368270 - 2368287 + F 89 -12.7 -2.85545 | opp_overlap 2368268 2368270, overlap 2368267 2368265 TAGCCAGTAAAAATA GTGGGCC AAAT GGCCCAC TGATGTTATTGGCAA TERM 2591 2368287 - 2368270 - f 100 -12.7 -3.99327 | opp_overlap 2368270 2368267 2368265, overlap 2368268 TAGCCAGTAAAAATA GTGGGCC AAAT GGCCCAC TGATGTTATTGGCAA TERM 2592 2368381 - 2368407 + F 80 -8.7 -3.9749 | gap 1, overlap 2368381 CTTCCATGGGGGCTA G-ATCCGCGCCA CTAC TGGCGCGGACGC TTTACTCTTCTGCCT TERM 2593 2368777 - 2368763 - g 100 -7.2 -5.26875 | opp_overlap 2368763 TTTCTAATGAAAAAA TCAAGA GCA TCTTGA TGGATTACTCATCCC soxR2 2368576 - 2369415 + | putative regulatory protein YP_2124 2369674 - 2369465 - | hypothetical protein TERM 2594 2369591 - 2369568 - G 100 -14 -5.60993 | CGGCGCACAAAAAAA TGCCGATGTT TTTC AACATCGGCA CCGTAACAATTAAAT zntB 2370772 - 2369789 - | zinc transporter TERM 2595 2370984 - 2370954 - R 93 -9 -4.54323 | opp_overlap 2370956, overlap 2370956 2370960 AAGGACAAGAATAAA TGCAAAGGCGGATT TAA AATCCGCCTCTGTT AATTAGTTAAAAACA TERM 2596 2370956 - 2370982 + r 100 -13.8 -3.45366 | opp_overlap 2370954 2370956 2370960 GGACAAGAATAAATG CAAAGGCGGATT TAA AATCCGCCTCTG TTAATTAGTTAAAAA TERM 2597 2370982 - 2370956 - R 100 -16 -2.57496 | opp_overlap 2370956, overlap 2370954 2370960 GGACAAGAATAAATG CAAAGGCGGATT TAA AATCCGCCTCTG TTAATTAGTTAAAAA TERM 2598 2370978 - 2370960 - R 100 -13.2 -3.95772 | opp_overlap 2370956, overlap 2370956 2370954 AAGAATAAATGCAAA GGCGGATT TAA AATCCGCC TCTGTTAATTAGTTA mppA 2372631 - 2371015 - | putative periplasmic murein peptide-binding protein YP_2127 2373009 - 2373779 + | murein peptide amidase A dgoA2 2374795 - 2373821 - | putative mandelate racemase / muconate lactonizing protein TERM 2599 2374830 - 2374846 + H 71 -9.5 -2.98368 | overlap 2374829 ACAGTTTTAGCTTAG GTATGAG ACC CTCATAC GTTTATCCGTTAAGT TERM 2600 2374852 - 2374872 + H 70 -2.5 -5.01732 | overlap 2374853 ACCCTCATACGTTTA TCCGTTAAG TCT TTAAACGGG TTTTTTAGCGAACTT tpx 2374958 - 2375461 + | thiol peroxidase TERM 2601 2375537 - 2375561 + F 100 -7.8 -5.55769 | gap 1, opp_overlap 2375537 TATCGTGACTCAAAA CGGCTG-CCCC ACTC GGGTACAGCCG TTTTTTATTGTGCCC TERM 2602 2375561 - 2375537 - f 88 -10 -4.18494 | gap 1, opp_overlap 2375537 TATCGTGACTCAAAA CGGCTGC-CCC ACTC GGGTACAGCCG TTTTTTATTGTGCCC TERM 2603 2375583 - 2375601 + F 100 -16 -3.07307 | opp_overlap 2375583 ATTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC TERM 2604 2375601 - 2375583 - f 100 -16 -4.37092 | opp_overlap 2375583 ATTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC tnp_21 2375663 - 2376172 + | transposase for the IS1541 insertion element TERM 2605 2376239 - 2376285 + T 95 -7.2 -5.5762 | opp_overlap 2376230 2376253, overlap 2376246 2376250 2376252 2376253 AACAGAGCCTTATAG GCGCATATGAAAAACCTCCGGC TAT GCCGGAGGATATTTATTTACTC TTTTTTATGTTTGAT TERM 2606 2376246 - 2376278 + T 100 -11.3 -4.20024 | opp_overlap 2376253, overlap 2376239 2376250 2376252 2376253 CCTTATAGGCGCATA TGAAAAACCTCCGGC TAT GCCGGAGGATATTTA TTTACTCTTTTTTAT TERM 2607 2376250 - 2376274 + T 100 -9.9 -4.60648 | opp_overlap 2376253, overlap 2376246 2376239 2376252 2376253 ATAGGCGCATATGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTTACTCTTTT TERM 2608 2376252 - 2376272 + T 100 -12.5 -3.88114 | opp_overlap 2376253, overlap 2376250 2376246 2376239 2376253 AGGCGCATATGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTTACTCTT TERM 2609 2376271 - 2376253 - T 100 -16 -4.8048 | opp_overlap 2376253 2376252 2376250 2376246 2376239 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTACTCT TERM 2610 2376253 - 2376271 + T 100 -16 -2.91241 | opp_overlap 2376253, overlap 2376252 2376250 2376246 2376239 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTACTCT tyrR 2377986 - 2376319 - | DNA-binding transcriptional regulator TyrR YP_2132 2378232 - 2378678 + | hypothetical protein YP_2133 2378740 - 2379198 + | hypothetical protein YP_2134 2380269 - 2379208 - | hypothetical protein TERM 2611 2379629 - 2379647 + g 75 -8.8 -3.85817 | opp_overlap 2379623 2379622 ATCATCAACGCTGAT TCAGCAGC ATA GCGGCTGA TTTCTGCCCGAGCCT YP_2135 2381663 - 2380266 - | hypothetical protein TERM 2612 2381366 - 2381335 - G 74 -7.3 -4.1899 | gap 1, opp_overlap 2381352 TCACTGGAGCGAAAA CGTAACGCCAGACG GATTT CG-CTGACGCCACG GGTCGGCGTTGGCCA pspD 2381886 - 2381644 - | peripheral inner membrane phage-shock protein pspC 2382330 - 2381971 - | DNA-binding transcriptional activator PspC TERM 2613 2382217 - 2382196 - G 76 -3.1 -5.09173 | gap 1, overlap 2382198 GAATAGGCCAAAAAA CAGTGATAAC ACC ATTATCAC-G CGAACCAACCGTACT TERM 2614 2382216 - 2382198 - G 71 -6.8 -4.16351 | overlap 2382196 ATAGGCCAAAAAACA GTGATAAC ACC ATTATCAC GCGAACCAACCGTAC TERM 2615 2382283 - 2382303 + g 83 -5.3 -5.1675 | overlap 2382291 CCCTTTGATCATGCC CTCTTCCGG TAC CCGGTACAG TTTTTTACTGCCTAA pspB 2382557 - 2382330 - | phage shock protein B pspA 2383384 - 2382719 - | phage shock protein PspA pspF 2383629 - 2384657 + | phage shock protein operon transcriptional activator TERM 2616 2384748 - 2384716 - T 100 -11.3 -4.20696 | opp_overlap 2384723, overlap 2384704 2384720 2384722 2384723 GGACGAAGGGTAAAA TAAATATCCTCCGGC ATA GCCGGAGGTTTTTCA TATGCGCCTATAAGG TERM 2617 2384744 - 2384720 - T 100 -9.9 -4.68655 | opp_overlap 2384723, overlap 2384704 2384716 2384722 2384723 GAAGGGTAAAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCATATGCGCCTAT TERM 2618 2384742 - 2384722 - T 100 -12.5 -3.94471 | opp_overlap 2384723, overlap 2384704 2384720 2384716 2384723 AGGGTAAAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 2619 2384741 - 2384723 - T 100 -16 -2.95598 | opp_overlap 2384723, overlap 2384704 2384722 2384720 2384716 GGGTAAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 2620 2384723 - 2384741 + T 100 -16 -4.8048 | opp_overlap 2384704 2384723 2384722 2384720 2384716 GGGTAAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC tnp_22 2385280 - 2384822 - | transposase for the IS1541 insertion element TERM 2621 2385411 - 2385393 - H 100 -16 -3.07307 | opp_overlap 2385393 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 2622 2385393 - 2385411 + H 100 -16 -4.36914 | opp_overlap 2385393 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 2623 2385447 - 2385430 - H 100 -8.4 -5.24129 | TCTGGGCACAAAAAA GCCAGC ACCCGA GCTGGC TTAAAATACTGGAAG TERM 2624 2385548 - 2385534 - H 70 -5.8 -4.28361 | TGAATCGCATCAAAA TGATAA TAC TTATCA ATATCAATTGTAAAT YP_2143 2385624 - 2385809 + | hypothetical protein sapA 2385945 - 2387591 + | peptide transport periplasmic protein precursor sapB2 2387588 - 2388553 + | peptide transport system permease protein sapC 2388540 - 2389430 + | peptide transport system permease protein TERM 2625 2389799 - 2389812 + G 79 -8.1 -4.42238 | opp_overlap 2389797 TGGACATATAAAGGC CGCTG GTGG CAGCG TTTTCATTGGCGTAA sapD 2389430 - 2390422 + | peptide transport system ATP-binding protein sapF 2390422 - 2391237 + | peptide transport system ATP-binding protein TERM 2626 2391278 - 2391297 + F 100 -12.2 -3.96534 | overlap 2391290 CGGTGGTTAACCTCC CCGCTATC TTTT GATAGCGG TTATCTTCTTTTAAC YP_2149 2391627 - 2392907 + | hypothetical protein tppB 2393550 - 2395055 + | putative tripeptide transporter permease TERM 2627 2395085 - 2395066 - f 81 -9.2 -3.77607 | opp_overlap 2395067, overlap 2395067 AATAAGCTGACTAAA CGCGCTCC TGCG GGAGCGCT TTTAGTGCTAGTTAG TERM 2628 2395084 - 2395067 - f 89 -12.7 -2.85841 | opp_overlap 2395067, overlap 2395066 ATAAGCTGACTAAAC GCGCTCC TGCG GGAGCGC TTTTAGTGCTAGTTA TERM 2629 2395067 - 2395084 + F 100 -12.7 -4.33105 | opp_overlap 2395066 2395067 ATAAGCTGACTAAAC GCGCTCC TGCG GGAGCGC TTTTAGTGCTAGTTA YP_2151 2395310 - 2395900 + | hypothetical protein TERM 2630 2396034 - 2396046 + F 74 -4.8 -4.84492 | TCCATCAGCATTGGA GCCT CTAAC AGGC TTTTATTGTCATTAA YP_2152 2396146 - 2396409 + | hypothetical protein TERM 2631 2396544 - 2396515 - f 72 -9.3 -3.16553 | opp_overlap 2396508, overlap 2396513 ACAACTATCAATACA CTACAGCGGGG GAAATCAT CACCGCTGTAG GACTTGTATTGCCCC gst2 2396651 - 2397259 + | glutathionine S-transferase TERM 2632 2397307 - 2397277 - T 100 -15.6 -3.51694 | opp_overlap 2397274, overlap 2397273 AATAATGAGAATCAA TCAATTGCCCCC ATCACTA GGGGGCAATTGA AAATGGTTAGATTAC pdxY 2398179 - 2397319 - | pyridoxamine kinase TERM 2633 2398320 - 2398299 - R 87 -5.1 -5.52384 | opp_overlap 2398302, overlap 2398302 GTCTCAGCAAAAAAA TAAGGGACA TTTC TGCCCCTTC TCTTATTTTACGCTT TERM 2634 2398317 - 2398302 - R 82 -6.8 -4.8487 | opp_overlap 2398302, overlap 2398299 TCAGCAAAAAAATAA GGGACA TTTC TGCCCC TTCTCTTATTTTACG tyrS 2399620 - 2398334 - | tyrosyl-tRNA synthetase TERM 2635 2398718 - 2398733 + g 74 -2.5 -5.21506 | overlap 2398713 AACATATTGCGCGCG CGGTG CTTTAC CACTG TTTTTATCTTCTTCT TERM 2636 2398889 - 2398903 + g 70 -8.6 -3.74693 | CCAGACTGCACCCCC TTCGGT TTT ACCGAA TTTAGTGCCATCGGC pdxH 2400443 - 2399790 - | pyridoxamine 5'-phosphate oxidase YP_2157 2400785 - 2400534 - | hypothetical protein anmK 2402018 - 2400906 - | anhydro-N-acetylmuramic acid kinase TERM 2637 2401590 - 2401570 - G 70 -8.1 -3.69094 | AACGCATGATGGAAA GCGGGCACC AAG GGGGCCCCC TGCCCGCCATAGGCC slyB 2402574 - 2403041 + | putative lipoprotein TERM 2638 2403093 - 2403123 + T 100 -14.1 -5.34555 | opp_overlap 2403097, overlap 2403097 TAAATCAGAACAGTA AAAACCGGGGTTC ATTGC GAACCCCGGTTTG TTTTTTGTACTGTGG TERM 2639 2403097 - 2403119 + T 100 -14.9 -5.1471 | opp_overlap 2403097, overlap 2403093 TCAGAACAGTAAAAA CCGGGGTTC ATTGC GAACCCCGG TTTGTTTTTTGTACT TERM 2640 2403119 - 2403097 - T 100 -15.6 -4.90906 | opp_overlap 2403097 2403093 TCAGAACAGTAAAAA CCGGGGTTCA TTG CGAACCCCGG TTTGTTTTTTGTACT slyA 2403616 - 2403185 - | transcriptional regulator SlyA TERM 2641 2403778 - 2403758 - R 81 -5.5 -5.24531 | opp_overlap 2403761, overlap 2403761 ATTCTTTAGAAAAAA TGATGTATC AAC GATACATTA CCTCTTAAGGATTAA TERM 2642 2404406 - 2404378 - R 100 -8.9 -4.67942 | CCGAAGAAAGTAAAA CTACGCCAGTC TGAGCGC GATTGGCGTAG AGAAAGATTAAGGGA aRA12 2405310 - 2404414 - | putative aldo/keto reductase YP_2162 2405807 - 2405442 - | Fe-S protein TERM 2643 2405641 - 2405610 - G 100 -14.6 -4.51097 | gap 1, overlap 2405599 GCAACCACGACAAAA GCCACGGTCATCTGT TTG ACAGAT-ACCGCGGC AGGGGCTGGGAATAT TERM 2644 2405677 - 2405664 - G 80 -3.1 -5.27779 | overlap 2405669 GGGAATATCAAAAAA CTCAA GTTG CTGAG CCACGCTGCCTCCTA TERM 2645 2405980 - 2405991 + G 87 -4.4 -5.40072 | opp_overlap 2405980 GATCCGATTCGACAA TAGC GACA GCTA TTTTTTTGCAGCAAC YP_2163 2405855 - 2407492 + | putative cell division protein TERM 2646 2407652 - 2407671 + F 100 -5.7 -5.80364 | AGACCATAGCCTTGA TGCCAGC GCCTTG GTTGGCA TTTTTTTCTTGACCT acrR4 2407715 - 2408314 + | TetR family transcriptional regulator nemA2 2408402 - 2409499 + | N-ethylmaleimide reductase sepC 2412674 - 2409720 - | insecticial toxin TERM 2647 2413260 - 2413278 + G 70 -4.6 -4.64676 | CTGGCCCGGTAAAAG GCGGTAAT ACC ATTATTGC TTTTGTTGAAGATCC gloA1 2412908 - 2413354 + | lactoylglutathione lyase TERM 2648 2413365 - 2413382 + F 87 -8.4 -4.48987 | opp_overlap 2413364 ACTGATTAACTTAAG GGCACC TCGGAC GGTGCC TTTTACTTATCACAA rnt 2413466 - 2414113 + | ribonuclease T TERM 2649 2414153 - 2414136 - T 100 -8.4 -5.26875 | CTTGTAATTAAAAAA GGTGGC CATTAC GCCACC TGAGGTTATTGACAA TERM 2650 2414231 - 2414257 + T 72 -10.1 -2.88849 | gap 1, opp_overlap 2414220, overlap 2414226 2414230 ACATCCATGTAGGCT CGAACCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCTCTGCC TERM 2651 2414321 - 2414338 + T 79 -8.4 -4.15703 | TTGTCAGCAGTCTGA GGTGGC CATTAC GCCACC TTCTTATTTATCACA YP_2169 2414787 - 2414422 - | hypothetical protein YP_2170 2415093 - 2414872 - | hypothetical protein TERM 2652 2415098 - 2415076 - G 91 -7 -5.1287 | opp_overlap 2415076 2415082, overlap 2415079 CTCAGAGTGAAAAAA CAACAATGGC AAC GCCATTAATG TTTTCTCACAATATC TERM 2653 2415095 - 2415079 - G 82 -7.3 -4.65666 | opp_overlap 2415076 2415082, overlap 2415076 AGAGTGAAAAAACAA CAATGGC AAC GCCATTA ATGTTTTCTCACAAT TERM 2654 2415503 - 2415487 - g 70 -2.9 -4.87892 | overlap 2415490 TCGCAATAAAATAAA CAGCAGT CGG ACAACTG AAAGTAAAACTGCAG spr2 2415149 - 2416063 + | hypothetical protein TERM 2655 2416616 - 2416628 + G 73 -10.5 -3.31162 | opp_overlap 2416616, overlap 2416614 2416612 AAGAGATCGTGAAAA CCGCC AAT GGCGG TGTGTTTAATAATGC TERM 2656 2416628 - 2416616 - g 88 -10.5 -4.1413 | opp_overlap 2416616 2416614 2416612 AAGAGATCGTGAAAA CCGCC AAT GGCGG TGTGTTTAATAATGC sodB 2416399 - 2417019 + | superoxide dismutase TERM 2657 2417072 - 2417094 + F 100 -16.4 -3.68222 | opp_overlap 2417072, overlap 2417075 CATCGATAACATAAA TAAGGGCGGT TTA ACCGCCCTTA TTATTACCATTCACC TERM 2658 2417094 - 2417072 - f 100 -16.4 -4.28188 | opp_overlap 2417072 2417075 CATCGATAACATAAA TAAGGGCGGT TTA ACCGCCCTTA TTATTACCATTCACC TERM 2659 2417075 - 2417091 + F 100 -13.7 -3.97139 | opp_overlap 2417072, overlap 2417072 CGATAACATAAATAA GGGCGGT TTA ACCGCCC TTATTATTACCATTC TERM 2660 2418274 - 2418257 - g 86 -6.9 -4.9725 | opp_overlap 2418257 2418259, overlap 2418260 ATTCTGACACAAAAA CATCGCC CAAC GGCGGTG TTCTGTGGCGGCGAT purR5 2417546 - 2418571 + | DNA-binding transcriptional repressor PurR TERM 2661 2418618 - 2418638 + T 84 -9.8 -3.85092 | opp_overlap 2418621, overlap 2418612 2418621 CCGGCCCGATTCGGA TAACCGCA TTCCC TGCGGTTA TTTGCTATCGATGGT TERM 2662 2418621 - 2418635 + T 72 -7.1 -4.05208 | opp_overlap 2418621, overlap 2418612 2418618 GCCCGATTCGGATAA CCGCA TTCCC TGCGG TTATTTGCTATCGAT lysR12 2419592 - 2418660 - | putative DNA-binding transcriptional regulator TERM 2663 2419143 - 2419123 - G 74 -4.5 -4.82128 | overlap 2419124 TCACGAAAGACAAAA CGCCCACCC ACT GGGATGGCA CGGGTCGCCCCTATG proP24 2419882 - 2421084 + | inner membrane transport protein YdhC cfa 2421564 - 2422715 + | cyclopropane fatty acyl phospholipid synthase TERM 2664 2422725 - 2422754 + T 86 -5.7 -5.3236 | opp_overlap 2422725 2422728 2422730 2422732, overlap 2422728 CGCTAACCTCAGATA GGAGACAGGGG GATAAAAA CCCCTGTCTTA TTTTTTGTAGGTTAT TERM 2665 2422728 - 2422751 + T 100 -9.6 -4.73105 | opp_overlap 2422728 2422725 2422730 2422732, overlap 2422725 TAACCTCAGATAGGA GACAGGGG GATAAAAA CCCCTGTC TTATTTTTTGTAGGT ribE 2423422 - 2422766 - | riboflavin synthase subunit alpha YP_2178 2423467 - 2423658 + | hypothetical protein norM2 2423671 - 2425044 + | multidrug efflux protein TERM 2666 2425133 - 2425123 - f 82 -6.8 -4.87803 | overlap 2425124 TAGTCTCAAATAAAA GGGA GTC TCCC CAACAACATCTGGAT TERM 2667 2427185 - 2427175 - g 70 -3.2 -4.89393 | GAAACCGCAGAAAAA CTGG AAG CCAA AGTGATTGTGGTCGC pykF 2426071 - 2427483 + | pyruvate kinase TERM 2668 2427538 - 2427509 - f 77 -10.8 -2.77344 | opp_overlap 2427509 2427514, overlap 2427514 TTATTGTTCAATAAT TAAAACGCCGCT CTCTAT AGCGGCGTTTTC TTTTTTAAAGCTTGC TERM 2669 2427509 - 2427538 + F 100 -10.8 -5.055 | opp_overlap 2427509 2427514, overlap 2427514 TTATTGTTCAATAAT TAAAACGCCGCT CTCTAT AGCGGCGTTTTC TTTTTTAAAGCTTGC TERM 2670 2427533 - 2427514 - f 100 -10.7 -4.56133 | opp_overlap 2427514 2427509, overlap 2427509 GTTCAATAATTAAAA CGCCGCT CTCTAT AGCGGCG TTTTCTTTTTTAAAG TERM 2671 2427514 - 2427533 + F 100 -10.7 -5.42198 | opp_overlap 2427509 2427514, overlap 2427509 GTTCAATAATTAAAA CGCCGCT CTCTAT AGCGGCG TTTTCTTTTTTAAAG lpp 2427804 - 2428040 + | major outer membrane lipoprotein TERM 2672 2428062 - 2428080 + F 100 -14.6 -5.60993 | opp_overlap 2428062 TTCCTGAATGAAAAA TGGCGCAC ATT GTGCGCCA TTTTTTTGTGCCCAG TERM 2673 2428080 - 2428062 - f 100 -14.6 -4.8622 | opp_overlap 2428062 TTCCTGAATGAAAAA TGGCGCAC ATT GTGCGCCA TTTTTTTGTGCCCAG TERM 2674 2428100 - 2428118 + F 100 -16 -3.07307 | opp_overlap 2428100 TTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC TERM 2675 2428118 - 2428100 - f 100 -16 -4.36914 | opp_overlap 2428100 TTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC tnp_23 2428180 - 2428689 + | transposase for the IS1541 insertion element TERM 2676 2428767 - 2428791 + F 100 -9.9 -4.44046 | opp_overlap 2428770, overlap 2428769 2428770 ATAGGCGCATATGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTTGCCCTACG TERM 2677 2428769 - 2428789 + F 100 -12.5 -3.82628 | opp_overlap 2428770, overlap 2428767 2428770 AGGCGCATATGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTTGCCCTA TERM 2678 2428770 - 2428788 + F 100 -16 -2.88854 | opp_overlap 2428770, overlap 2428769 2428767 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTGCCCT TERM 2679 2428788 - 2428770 - f 100 -16 -4.8048 | opp_overlap 2428769 2428767 2428770 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTGCCCT TERM 2680 2429105 - 2429061 - f 90 -11.6 -3.66556 | gap 1, opp_overlap 2429053 2429048, overlap 2429062 AAGCGCGGAATACAA TTCTG-GCTTTACCACGATGG ATCT CCACCACGGTAAAGCACAGAC AAGTGATTAGTTATT TERM 2681 2429104 - 2429062 - f 100 -15.1 -2.79452 | gap 1, opp_overlap 2429053 2429048, overlap 2429061 AGCGCGGAATACAAT TCTG-GCTTTACCACGATGG ATCT CCACCACGGTAAAGCACAGA CAAGTGATTAGTTAT TERM 2682 2429249 - 2429267 + F 100 -13.2 -4.01078 | CCAGGGGGTAATCTG CTCTCCTG ATT CAGGAGAG TTTATGGTCACTTTT YP_2184 2429271 - 2430293 + | transposase for insertion sequence IS100 TERM 2683 2430374 - 2430360 - g 77 -11.4 -3.3506 | overlap 2430351 TGGAAAGCCTTATAA GCGCAG CGC CTGCGC TGTCACAACAGGCAG dnaC_18 2430290 - 2431072 + | transposase/IS protein YP_2186 2432828 - 2432406 - | cysteine desufuration protein SufE TERM 2684 2432884 - 2432860 - R 91 -6.4 -5.43553 | opp_overlap 2432860 ACGTAAAAAATAAAA GCCGACTGCT GAAAG AATAGTCGGC TTTGGTGTTGCCTGT csdB1 2434149 - 2432917 - | selenocysteine lyase TERM 2685 2433916 - 2433905 - G 70 -4.4 -4.63218 | GCGGCGTGAATAAAA TCAG CCAC CTGA GTGCGTACGGCTTCC YP_2188 2435459 - 2434134 - | cysteine desulfurase activator complex subunit SufD sufC 2436180 - 2435434 - | cysteine desulfurase ATPase component YP_2190 2437877 - 2436366 - | cysteine desulfurase activator complex subunit SufB TERM 2686 2436522 - 2436535 + g 79 -5.3 -4.90906 | opp_overlap 2436522, overlap 2436530 CAAGCAATAGAACAG TTGGT CATC ACCAA TTTTTGATGTTGTGG TERM 2687 2437083 - 2437097 + g 74 -11.4 -3.1355 | ATAGCTGTCGCGCAC GGGTGC CGA GCACCC TTCGATATAGCTGAC sufA 2438290 - 2437892 - | iron-sulfur cluster assembly scaffold protein TERM 2688 2438118 - 2438106 - G 74 -6.9 -4.28977 | opp_overlap 2438105 ATAACATAGGCAAAA CCGGC ACA ACCGG ACTGTTTGACGCCGA YP_2192 2438599 - 2438441 - | hypothetical protein TERM 2689 2438889 - 2438871 - R 78 -5.3 -5.03314 | gap 1 GCTATTGGCAAAAAA TGACGACG TTAG CG-CGTCA ATACGGCGATCGTTA paaI1 2439295 - 2438879 - | hypothetical protein glcD3 2442473 - 2439417 - | hypothetical protein TERM 2690 2442389 - 2442399 + g 74 -6.8 -4.4078 | opp_overlap 2442398 TAGTAGCAGTATCGC CGGT AAA ACCG TTTTGCTTCAAAGCG TERM 2691 2442439 - 2442424 - G 74 -4 -5.03747 | overlap 2442426 AAAGCGTCCAAAAAA TCCAGT ACCG ACTGAA TGACACCCGGTGCCT perM1 2443094 - 2444197 + | putative inner membrane protein TERM 2692 2444371 - 2444381 + T 86 -2.6 -5.7946 | ATCTCATTCTACTTC TTAT TTA ATAA TTTTTTTATTCAGAG TERM 2693 2444541 - 2444560 + T 100 -9.3 -6.21477 | CTGTGTGTAGTCTTT GCCTGTC ACCTAA GACAGGC TTTTTTTTTGCTATT TERM 2694 2444714 - 2444695 - T 100 -10 -5.47399 | overlap 2444684 TTAATTGCAAAAAAA TCCGCAAC CTAA GCTGCGGA TGATGAATACCTATA ppsA 2447151 - 2444797 - | phosphoenolpyruvate synthase YP_2197 2447518 - 2448339 + | hypothetical protein TERM 2695 2448611 - 2448597 - g 74 -10 -3.50393 | GGTTATTGCAGATAA CGTGAC GGC GTCACG TAAACGAATAGAGAA aroH 2448496 - 2449542 + | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 2696 2449592 - 2449640 + T 95 -7.8 -5.00616 | gap 1, opp_overlap 2449607, overlap 2449594 2449635 ATTAAATGAATACCT TCGGGATAGGGAAAAGTTAAC GTTGTCGG GTTAACTTTT-TCTATCCCTA TTTTTTCCGAAAAAA TERM 2697 2449594 - 2449638 + T 91 -10.4 -4.13561 | gap 1, opp_overlap 2449607, overlap 2449592 2449635 TAAATGAATACCTTC GGGATAGGGAAAAGTTAAC GTTGTCGG GTTAACTTTT-TCTATCCC TATTTTTTCCGAAAA lplA 2452242 - 2451226 - | lipoate-protein ligase A nlpC 2452798 - 2452367 - | putative lipoprotein YP_2202 2452772 - 2452954 + | hypothetical protein rhaT8 2453497 - 2453111 - | hypothetical protein rhaT9 2453838 - 2453494 - | hypothetical protein TERM 2698 2453644 - 2453617 - G 87 -9.9 -4.32571 | CAACACAAAATTAAA GCTGAGCATAG GATAGG CCACGCTCAGC GGGAGTTGCTGCAAT TERM 2699 2453765 - 2453717 - G 82 -13.1 -3.34895 | opp_overlap 2453734 GCTATCGCCAACCAA CGCAATGTCAGATTCAACCGCCG GGC CTGCGGTTGCTCCCAACACTGCG CAGCCTGTTTTTGAC arnT 2455499 - 2453835 - | 4-amino-4-deoxy-L-arabinose transferase TERM 2700 2455300 - 2455310 + g 86 -8.2 -4.59773 | opp_overlap 2455300 2455299 2455297 TTATTAAACCAATAC CCGG CGA CCGG TTTTTCAAAATAACG cDA12 2456401 - 2455496 - | hypothetical protein TERM 2701 2456265 - 2456248 - G 79 -6.9 -4.7254 | opp_overlap 2456247, overlap 2456250 AGCGCGGACGAAAAA GGCGCCA TAAA TGGCGTC CCATATTATCCGGCC wcaG9 2458401 - 2456398 - | bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase TERM 2702 2458292 - 2458282 - G 91 -6.8 -5.10767 | overlap 2458274 GACCGAAGAGAAAAA GCGA TTC TCGC CAGGATTATCAGTAT pmrF 2459381 - 2458398 - | undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase TERM 2703 2459139 - 2459121 - G 82 -11 -3.76492 | opp_overlap 2459121 GCTAACCTGATTAAA TCCCGCCA TAA TGGCGGAA TGTTGACCATAATTA wecE 2460522 - 2459368 - | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase btuD 2461633 - 2460872 - | vitamin B12-transporter ATPase btuE 2462209 - 2461655 - | putative glutathione peroxidase btuC2 2463355 - 2462279 - | vtamin B12-transporter permease TERM 2704 2463496 - 2463452 - R 75 -8.7 -3.63515 | opp_overlap 2463452 2463450 CTTTATTGCTAATAA GTCGCTAACTCTGCTTGGTCA TAG CAAACAAGTAAAGTTAGCAAC TGTTTGTTATGCTCG YP_2213 2463971 - 2463513 - | hypothetical protein TERM 2705 2464286 - 2464271 - R 100 -11.8 -5.45802 | opp_overlap 2464271 TCTTGAAAAGAAAAA GGCCGC TTGC GCGGCC TTTTATGTCGGAAAC TERM 2706 2464271 - 2464286 + r 100 -11.8 -4.52589 | opp_overlap 2464271 TCTTGAAAAGAAAAA GGCCGC TTGC GCGGCC TTTTATGTCGGAAAC ihfA 2464601 - 2464305 - | integration host factor subunit alpha pheT 2466993 - 2464606 - | phenylalanyl-tRNA synthetase subunit beta pheS 2467990 - 2467007 - | phenylalanyl-tRNA synthetase subunit alpha TERM 2707 2467132 - 2467116 - G 79 -8 -4.29176 | ATACCGAATGCAAAA CCTGAG TAAAT CTCAGG ATCGATACCGACATT TERM 2708 2467874 - 2467885 + g 78 -3.6 -5.09895 | overlap 2467863 CGATGTCATTTGAAG GGTC AAGT GGCC TTTTTTACCTAGATA TERM 2709 2468299 - 2468282 - g 100 -8.4 -6.04324 | GTAAAAAACAAAAAA GCCTCC ACGATG GGAGGC TTCGGCGCTATTTTT YP_2217 2468183 - 2468362 + | hypothetical protein TERM 2710 2468458 - 2468476 + T 78 -10.3 -3.2496 | opp_overlap 2468458, overlap 2468453 GTGCAAAGATTAAAA GAGGGAG ACAAG CTCCCTC TTCAATTCTGACTTA TERM 2711 2468476 - 2468458 - T 100 -10.3 -4.49756 | opp_overlap 2468458 2468453 GTGCAAAGATTAAAA GAGGGAG ACAAG CTCCCTC TTCAATTCTGACTTA rplT 2468845 - 2468489 - | 50S ribosomal protein L20 rpmI 2469080 - 2468883 - | 50S ribosomal protein L35 infC 2469527 - 2469177 - | protein chain initiation factor IF-3 thrS 2471660 - 2469732 - | threonyl-tRNA synthetase TERM 2712 2469965 - 2469977 + g 80 -3.3 -5.32565 | CTTTTGCTCTAATAC CCGCA TCT TGCAG TTTTTTGGTTACTTG TERM 2713 2472193 - 2472211 + G 86 -3 -5.56568 | overlap 2472195 ATCAAAACTTTATGT CTGCCGTT TCG AAAGGCCG TTTTTTTGATGGTGT YP_2222 2472051 - 2472263 + | hypothetical protein TERM 2714 2472902 - 2472929 + G 100 -13.5 -5.19275 | TGGTTACTGGAACGT CGCCCTGATTG TTTATT CAATCGGGGCG TTTTATTTTCTGGCT YP_2223 2472675 - 2472950 + | hypothetical protein YP_2224 2473354 - 2473022 - | hypothetical protein marC2 2473592 - 2474275 + | multiple drug resistance protein MarC mltE1 2475059 - 2474397 - | putative membrane-bound lytic mureintransglycosylase TERM 2715 2474948 - 2474959 + g 85 -3.6 -5.40072 | CTACGTTAAGAGAAT TGCC CTGT GGCG TTTTTTTCAGCCACC TERM 2716 2475042 - 2475029 - G 82 -6.7 -4.89477 | CCGCCAACAATAAAA TTGCC ATTA GGCAA CCGACTTTTGAATTC yfeA 2475268 - 2476239 + | periplasmic-binding protein yfeB 2476236 - 2477126 + | ATP-binding transport protein yfeC 2477126 - 2478010 + | chelated iron transport system membrane protein TERM 2717 2478171 - 2478188 + G 73 -5.5 -4.67755 | TTCTCATGCTGTGCT GCCAGGG ATTG TTCTGGC TTTTTGGCTCGGTAT yfeD 2478007 - 2478900 + | chelated iron transport system membrane protein YP_2231 2479205 - 2480080 + | hypothetical protein yfeE 2480763 - 2480209 - | putative yfeABCD locus regulator TERM 2718 2480827 - 2480841 + H 76 -10 -3.36195 | overlap 2480816 2480826 2480824 ACATCCACACGTTGT GCGGTA CTT TACCGC TATGTTTGCTATTTA YP_2233 2481174 - 2481839 + | 2-deoxyglucose-6-phosphatase TERM 2719 2481962 - 2481949 - T 71 -2.3 -5.14563 | overlap 2481930 2481929 2481950 CTTTTTAGTAAAAAA GTCGC TATA GCGAT ACGGAGTGGAAAGGA TERM 2720 2482032 - 2482003 - T 93 -10.7 -4.16842 | gap 1, opp_overlap 2482002 2481999, overlap 2482004 GTCAGCGGTAATAAA GGGCGGCCAGAGTC AGT GACTC-AGCCGCCG AATATATTTTAGAGA TERM 2721 2482031 - 2482004 - T 100 -14.2 -3.09784 | gap 1, opp_overlap 2482002 2481999, overlap 2482003 TCAGCGGTAATAAAG GGCGGCCAGAGTC AGT GACTC-AGCCGCC GAATATATTTTAGAG TERM 2722 2482116 - 2482095 - T 84 -10.1 -3.74693 | TGCCACCGTATTAAA GGTGATCGC TCAG GCGGTCACC GAACTCGATAATAAA YP_2234 2483298 - 2482090 - | transposase for the IS285 insertion element YP_2235 2483807 - 2483394 - | hypothetical protein YP_2236 2484384 - 2483815 - | hypothetical protein TERM 2723 2484798 - 2484819 + r 95 -13.1 -3.15663 | overlap 2484814 TGCTAGCCCGCAGGG TGAGCCTCA CGAA TGAGGCTCA TTAATCCCGATGAGT ndh 2486226 - 2484922 - | NADH dehydrogenase TERM 2724 2485934 - 2485946 + g 82 -7.7 -4.6313 | opp_overlap 2485933 TGTTCATCACAAATC TCAGC CAG GCTGA TTGTTTTGTTTTCAC YP_2238 2487143 - 2486601 - | hypothetical protein bglX1 2488308 - 2487271 - | beta-hexosaminidase TERM 2725 2488404 - 2488392 - R 86 -7.7 -4.68919 | AAAGACAAATTAAAA CGTTG GCG CAACG GCGCGGCCCATGCCA cotS 2489239 - 2488373 - | hypothetical protein TERM 2726 2489047 - 2489067 + g 76 -7.6 -4.37658 | ATTTACGCTCACGTC GTCGGTTG ACCCC CAACTGAC TTTTGTGCGGCGATT TERM 2727 2489189 - 2489163 - G 74 -11.7 -2.73994 | gap 1, opp_overlap 2489163 2489162 2489160, overlap 2489166 2489167 ACCGGGCTAATATGA CAAT-CGGCGGT TTTC ACCGCCGGATTG ATGTTTGCTATTAAG TERM 2728 2489163 - 2489189 + g 74 -11.7 -2.72568 | gap 1, opp_overlap 2489163 2489166 2489167, overlap 2489162 2489160 ACCGGGCTAATATGA CAAT-CGGCGGT TTTC ACCGCCGGATTG ATGTTTGCTATTAAG TERM 2729 2489185 - 2489166 - G 70 -9.2 -3.52073 | opp_overlap 2489163 2489162 2489160, overlap 2489163 2489167 GGGCTAATATGACAA TCGGCGGT TTTC ACCGCCGG ATTGATGTTTGCTAT TERM 2730 2489184 - 2489167 - G 76 -12.7 -2.70923 | opp_overlap 2489163 2489162 2489160, overlap 2489166 2489163 GGCTAATATGACAAT CGGCGGT TTTC ACCGCCG GATTGATGTTTGCTA flgN2 2489795 - 2489220 - | putative lipoprotein TERM 2731 2489867 - 2489855 - R 78 -10.5 -3.34428 | overlap 2489853 2489851 2489849 AAAAATAAATAGAGA CGCGC ACT GCGCG CATTAAAATTATTGT YP_2242 2490291 - 2489836 - | putative lipoprotein hit 2490613 - 2490260 - | purine nucleoside phosphoramidase aroE 2491605 - 2490787 - | shikimate 5-dehydrogenase TERM 2732 2491974 - 2491942 - R 100 -11.3 -4.42806 | opp_overlap 2491949, overlap 2491946 2491948 2491949 TTAGTTTGAAATAAA TAAATATCCTCCGGC ATA GCCGGAGGTTTTTCA TATGCGCCTATAAGG TERM 2733 2491970 - 2491946 - R 100 -9.9 -4.78326 | opp_overlap 2491949, overlap 2491942 2491948 2491949 TTTGAAATAAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCATATGCGCCTAT TERM 2734 2491968 - 2491948 - R 100 -12.5 -3.99693 | opp_overlap 2491949, overlap 2491946 2491942 2491949 TGAAATAAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 2735 2491967 - 2491949 - R 100 -16 -2.98189 | opp_overlap 2491949, overlap 2491948 2491946 2491942 GAAATAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 2736 2491949 - 2491967 + r 100 -16 -4.8048 | opp_overlap 2491949 2491948 2491946 2491942 GAAATAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC tnp_24 2492557 - 2492048 - | transposase for the IS1541 insertion element TERM 2737 2492637 - 2492619 - R 100 -16 -3.07307 | opp_overlap 2492619 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAT TERM 2738 2492619 - 2492637 + r 100 -16 -4.37092 | opp_overlap 2492619 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAT TERM 2739 2492656 - 2492673 + r 100 -12.7 -4.35116 | opp_overlap 2492656 TCTGGGCACAATAAA GGGAGGC TTTC GCCTCCC TTTTGCTCTCCCCTA TERM 2740 2492673 - 2492656 - R 100 -12.7 -4.30719 | opp_overlap 2492656 TCTGGGCACAATAAA GGGAGGC TTTC GCCTCCC TTTTGCTCTCCCCTA ptsG 2494129 - 2492696 - | glucose-specific PTS system IIBC components TERM 2741 2494333 - 2494307 - R 73 -7.3 -4.15044 | opp_overlap 2494307 2494310 GTTTCTTTCAAGAAA GCACGTAATCC CTCTC GGATTTCGTAC TTTACGTAAAGAAAC tatD1 2495244 - 2494435 - | putative metallodependent hydrolase holB 2496308 - 2495259 - | DNA polymerase III subunit delta' TERM 2742 2495666 - 2495623 - GR 72 -7.3 -4.03413 | opp_overlap 2495623 2495651, overlap 2495658 AGCCCGCTACACAAA GCGCTGCGGATACTCCAAC GCTCTG GTTGGAGCAACCGCTCAGC CGCCAGCGGTGCGCC TERM 2743 2495819 - 2495806 - GR 78 -3.7 -5.17744 | overlap 2495808 2495809 AGATACCAATAAAAA CAGCG GCTA CGCAG TGTAGCCAGCAAGCT TERM 2744 2495829 - 2495808 - GR 71 -6.6 -4.20491 | gap 1, overlap 2495806 2495809 ATACCAATAAAAACA GC-GGCTAC GCAGT GTAGCCAGC AAGCTGGCGGGTTGG tdk 2496919 - 2496281 - | thymidylate kinase TERM 2745 2496796 - 2496786 - GR 71 -8.2 -3.53091 | AGTTTTTCCGCTAAA GGGG TTC CCCC CGGCTCACGGGTAAA TERM 2746 2496836 - 2496870 + gr 76 -7.8 -4.18762 | gap 1, overlap 2496832 GTTAATCCCTTGGGC CCGCAGCACCGCGAC CACGGT GTCGCGG-GTGGTGG TTTTCCCTGCCCCTT YP_2250 2497934 - 2496909 - | hypothetical protein TERM 2747 2498110 - 2498084 - R 84 -10.1 -3.8381 | gap 1, opp_overlap 2498093, overlap 2498085 2498100 AGACAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 2748 2498111 - 2498085 - R 72 -10.1 -2.89563 | gap 1, opp_overlap 2498093, overlap 2498084 2498100 GACAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT pabC 2499029 - 2498223 - | 4-amino-4-deoxychorismate lyase TERM 2749 2499367 - 2499343 - R 100 -9.9 -4.50761 | opp_overlap 2499346, overlap 2499345 2499346 ATGAATTTAAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCATATGCGCCTAT TERM 2750 2499365 - 2499345 - R 100 -12.5 -3.8535 | opp_overlap 2499346, overlap 2499343 2499346 GAATTTAAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 2751 2499364 - 2499346 - R 100 -16 -2.90126 | opp_overlap 2499346, overlap 2499345 2499343 AATTTAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 2752 2499346 - 2499364 + r 100 -16 -4.8048 | opp_overlap 2499346 2499345 2499343 AATTTAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC tnp_25 2499954 - 2499445 - | transposase for the IS1541 insertion element TERM 2753 2500016 - 2500034 + r 100 -16 -4.37092 | opp_overlap 2500016 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAT TERM 2754 2500034 - 2500016 - R 100 -16 -3.07307 | opp_overlap 2500016 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAT TERM 2755 2500077 - 2500049 - R 74 -9.6 -3.28712 | opp_overlap 2500054 2500056, overlap 2500054 GTTTTCTGGGCACAA TAAAAGACCCGG AAAAA CCGGGCCTTTTT AGCATCAGAACCTTA TERM 2756 2500054 - 2500072 + r 81 -7.3 -4.62069 | opp_overlap 2500049 2500054, overlap 2500056 CTGGGCACAATAAAA GACCCGG AAAAA CCGGGCC TTTTTAGCATCAGAA TERM 2757 2500072 - 2500054 - R 100 -9.5 -4.77165 | opp_overlap 2500054 2500056, overlap 2500049 CTGGGCACAATAAAA GACCCGG AAAAA CCGGGCC TTTTTAGCATCAGAA fabF4 2501344 - 2500103 - | 3-oxoacyl-(acyl carrier protein) synthase II TERM 2758 2501389 - 2501414 + r 86 -11.9 -2.91681 | opp_overlap 2501389 2501390 TTCGGACAAAAAAAA CTTAGGCGGTC GAAT GACCGCCTAAC TATCTAAACTTAAAG TERM 2759 2501414 - 2501389 - R 100 -11.9 -5.93809 | opp_overlap 2501389, overlap 2501390 TTCGGACAAAAAAAA CTTAGGCGGTC GAAT GACCGCCTAAC TATCTAAACTTAAAG TERM 2760 2501413 - 2501390 - R 100 -15.4 -4.15201 | opp_overlap 2501389, overlap 2501389 TCGGACAAAAAAAAC TTAGGCGGTC GAAT GACCGCCTAA CTATCTAAACTTAAA acpP 2501675 - 2501439 - | acyl carrier protein fabG 2502563 - 2501829 - | 3-ketoacyl-(acyl-carrier-protein) reductase fabD2 2503506 - 2502577 - | malonyl CoA-acyl carrier protein transacylase fabH2 2504494 - 2503544 - | 3-oxoacyl-(acyl carrier protein) synthase III TERM 2761 2503938 - 2503926 - G 70 -9.1 -3.63627 | overlap 2503935 TCTGGATACGGTAAA GCGAG CAA CTCGC CATAACGACCATCAG TERM 2762 2504052 - 2504027 - G 74 -9.9 -3.57263 | gap 1, opp_overlap 2504033, overlap 2504032 AGCGCCATCGCCAAA CAGAATGATCGT ACC ACGATC-TTCTG GATCCAATGCACGGG plsX 2505535 - 2504501 - | putative glycerol-3-phosphate acyltransferase PlsX rpmF 2505736 - 2505569 - | 50S ribosomal protein L32 YP_2260 2506273 - 2505749 - | hypothetical protein TERM 2763 2505967 - 2506013 + g 70 -11.6 -2.69471 | overlap 2505966 GCTCGTACGCTTCCG GTAATGCTTCAGCCTGCTCATC ATT GACGATCGGGCTGAAACAATAC GTTGTATGAACATGG maf 2506415 - 2507011 + | Maf-like protein TERM 2764 2507088 - 2507066 - T 100 -10.5 -5.09204 | opp_overlap 2507065 2507064 2507066 ACAGTCGAATAAAAA CGGGGCGCA TGCTG TGCCCCCCG CCTTTTATGATCATC TERM 2765 2507066 - 2507088 + T 76 -11.2 -2.56836 | opp_overlap 2507066, overlap 2507065 2507064 ACAGTCGAATAAAAA CGGGGCGCAT GCT GTGCCCCCCG CCTTTTATGATCATC rluA1 2508096 - 2507134 - | 23S rRNA pseudouridylate synthase C TERM 2766 2507380 - 2507397 + g 70 -9.1 -3.53811 | overlap 2507379 GATTTGATGCGTCCG GCCAGTC ACTG GGCTGGC TTTAACCAGCGTGGC TERM 2767 2509273 - 2509259 - g 76 -2.7 -5.15634 | opp_overlap 2509265 2509268, overlap 2509261 GATGCGATTAAAAAA GCGGC TGAAG GTCGC CCCGCGCCCTTCTTA TERM 2768 2509265 - 2509285 + G 74 -11.1 -3.18264 | opp_overlap 2509259 2509261, overlap 2509268 ATTAAAAAAGCGGCT GAAGGTCGC CCC GCGCCCTTC TTAATCCATCAGGAA TERM 2769 2509911 - 2509931 + G 71 -6.1 -4.28791 | GTACCGGCACCGTAC GTGACAATG AAT CGCTGTCAC TTTCTATTCTGCGTT TERM 2770 2511244 - 2511258 + G 74 -7.8 -4.18018 | opp_overlap 2511237 GGCACAATCGGCCAT GCCTCT GGC AGGGGC TTTTGCCTCACCAGA TERM 2771 2511524 - 2511501 - g 80 -12.4 -3.43203 | overlap 2511498 2511497 2511495 TTATGACAACACCAA CCGTTGCGGT TGCC ACCGCAGCGG TAACACTGGCCCCAC rne 2508671 - 2512336 + | ribonuclease E TERM 2772 2512407 - 2512452 + F 100 -15 -4.62957 | gap 1, overlap 2512398 2512413 2512414 CACTTTCTCTGGCGG TTGACATGGCCTGAGTTCGGT ACTGC ACCGGACTCAGGCCGT-TTAA TTTTACTTTGATTCT TERM 2773 2512413 - 2512447 + F 100 -18.7 -4.29472 | overlap 2512398 2512407 2512414 CTCTGGCGGTTGACA TGGCCTGAGTTCGGT ACTGC ACCGGACTCAGGCCG TTTAATTTTACTTTG TERM 2774 2512414 - 2512446 + F 100 -20 -3.16056 | overlap 2512398 2512413 2512407 TCTGGCGGTTGACAT GGCCTGAGTTCGGT ACTGC ACCGGACTCAGGCC GTTTAATTTTACTTT YP_2264 2512540 - 2512971 + | hypothetical protein pyrC 2513116 - 2514162 + | dihydroorotase dinI 2514475 - 2514720 + | DNA damage-inducible protein I TERM 2775 2514973 - 2514995 + T 84 -5.4 -5.26875 | overlap 2514974 2514989 ACCACAATACCATTT TGCCGGGGAG TCG CTCCTCAGCC TTTTTTGCTTAAAAC TERM 2776 2514974 - 2514994 + T 78 -8.9 -3.75402 | overlap 2514973 2514989 CCACAATACCATTTT GCCGGGGAG TCG CTCCTCAGC CTTTTTTGCTTAAAA TERM 2777 2515173 - 2515152 - T 75 -7.3 -4.371 | TTGAGTATACTAAAA CAGCTCACT CGGT AATGAGCCG CATTGATCCTCGTTA TERM 2778 2515511 - 2515490 - T 84 -10.1 -3.74693 | TGCCACCGTATTAAA GGTGATCGC TCAG GCGGTCACC GAACTCGATAATAAA YP_2267 2516693 - 2515485 - | transposase for the IS285 insertion element TERM 2779 2516844 - 2516869 + H 95 -7.7 -5.06816 | gap 1, opp_overlap 2516844 2516842 TATTACCCATAAACA GGCACCAG-TAA ATA TTATCTGGTGTC TTTTTATTAACCACT solA 2517054 - 2518169 + | N-methyltryptophan oxidase csgD 2518409 - 2519050 + | LuxR family regulatory protein TERM 2780 2519563 - 2519602 + T 100 -11.4 -4.37092 | overlap 2519564 TACCCCATTTTCGGT TCCTCAGGGCCGTAGG CCAATTAA CCAGTGGCCCTGAGGG TTTTCTAACCACCGT TERM 2781 2519564 - 2519601 + T 93 -12.7 -3.21934 | overlap 2519563 ACCCCATTTTCGGTT CCTCAGGGCCGTAGG CCAATTAA CCAGTGGCCCTGAGG GTTTTCTAACCACCG tqsA 2520680 - 2519622 - | putative transport protein YP_2271 2521950 - 2520829 - | hypothetical protein YP_2272 2522659 - 2522255 - | hypothetical protein YP_2273 2522910 - 2522749 - | hypothetical protein rhaT10 2523645 - 2522947 - | hypothetical protein TERM 2782 2523606 - 2523589 - G 71 -5.7 -4.34866 | ACCGAAGAAGACAAA CTTTTTA CTCG TAAAAAG AGAAGGACTGCGGTC ypeI 2524043 - 2524699 + | N-acylhomoserine lactone synthase YpeI ypeR 2525429 - 2524692 - | quorum-sensing transcriptional activator YpeR TERM 2783 2524882 - 2524894 + g 81 -6.3 -5.0095 | TCATTTTCCCGAGGA GAGAA AAT TTCTC TTTTATTCTCTTTTT TERM 2784 2525530 - 2525513 - R 85 -4.2 -5.52909 | CAAGATGTAAAAAAA TGTGAT CACTGC ATCACA TTCAAATTATTGACA TERM 2785 2525775 - 2525802 + r 91 -12.1 -3.47227 | opp_overlap 2525770 GCTCTATGAACTCCG CCATCTGGGTG CATTTA CATCCAGATGG TTGTGATGCTTACCC lysR13 2526896 - 2525916 - | LysR family transcriptional regulator TERM 2786 2527338 - 2527315 - g 84 -4.6 -5.32882 | gap 1 TACCATCAGAAAAAA TCAGGATGGAC GAT GTCC-CCCTAA ATCGCTTCCATATAA TERM 2787 2527464 - 2527437 - g 82 -11.4 -3.78409 | opp_overlap 2527432 TTAATTCAACTCAAA CCCATAATGGCA CTTA CACCATTATGGG AGGGATTACTCGGAT proP25 2527290 - 2528648 + | putative transporter protein YP_2279 2528695 - 2529198 + | hypothetical protein TERM 2788 2530202 - 2530212 + G 72 -8.2 -3.90762 | GCGCGGGAAGCTCGC CCGC CAA GCGG TATTTTTGCCCCATA tas2 2529209 - 2530228 + | putative oxidoreductase TERM 2789 2530299 - 2530258 - T 71 -9.7 -2.71731 | gap 1 GTGATTCTTTAACTA TTGGCCAGTG-CAACATA AAATCAA TACGTTAACACTGGCCAA AAAGAATCAAAACCA YP_2281 2530860 - 2530306 - | hypothetical protein YP_2282 2531875 - 2530871 - | hypothetical protein TERM 2790 2531281 - 2531267 - G 76 -5.7 -4.62872 | ATCAACGGTGAAAAA GGCAA AACCG TTGCC CGCTAAACCTTGTTC TERM 2791 2531727 - 2531743 + g 84 -4.3 -5.34309 | overlap 2531728 2531729 TTCAACCGGTTGGAG ATGGTGC CCC GCACCGC TTTTTCTTTAATGAT YP_2283 2532843 - 2531893 - | hypothetical protein YP_2284 2534186 - 2532840 - | hypothetical protein YP_2285 2534565 - 2534224 - | hypothetical protein YP_2286 2537882 - 2534595 - | helicases TERM 2792 2534939 - 2534917 - G 70 -9 -3.54424 | CTGGATTGTCGGAAA GGGGTGCACC GTT GCTGCTCCCC ACTCCAGGTCGCCTG TERM 2793 2535050 - 2535062 + g 74 -7.7 -4.20454 | opp_overlap 2535049 2535050 AATCAACAAAATTAT CTCGA GGT TCGAG TTTGGTTCTTTCTTG TERM 2794 2535192 - 2535203 + g 70 -4.4 -4.67353 | TTTGCAATAAACGGG GATC GCCG GATC TTTTTGAGTCAGTGC YP_2287 2538889 - 2537879 - | hypothetical protein TERM 2795 2539705 - 2539728 + H 74 -6.6 -4.28361 | AGGTGCCCCCCCTGC GCCCATAGCC TTTA GGCTAAGGCC TTTTAGTCAGATTGA mscS1 2539759 - 2541006 + | hypothetical protein YP_2289 2541225 - 2541413 + | hypothetical protein TERM 2796 2541565 - 2541530 - T 86 -12 -3.14132 | opp_overlap 2541523 TGGCTGGTGTACTAA TGGTGCTCTGAAATAT AAAA ATAATTCAGAGCACCG GGGCTACTATTTACA YP_2290 2542869 - 2541595 - | hypothetical protein TERM 2797 2542468 - 2542490 + g 73 -6.2 -4.59207 | opp_overlap 2542472 TGCACGCCATGTCCA CCAATTTGGC TCC GCCACACTGG TTTTATACTCTTTAT TERM 2798 2542661 - 2542644 - G 80 -3.3 -5.252 | overlap 2542645 GACGTTGATAAAAAA TTGCCGC GCGG GCGACAT CATCAATGGCGGATA YP_2291 2544029 - 2542908 - | hypothetical protein TERM 2799 2543284 - 2543301 + g 70 -8.5 -3.75332 | opp_overlap 2543287 ATACCGGCGTGCACA TTATCGG CGAC CCGATAA TTTACATTAACAAGT TERM 2800 2543470 - 2543484 + g 87 -4.2 -5.52986 | overlap 2543468 CCAATATTGTTATCG CCGC CTGTCGT GCGG TTTTTTTCGTAGCCT TERM 2801 2543667 - 2543656 - G 78 -3.6 -5.14563 | TGCTTGAGTAAAAAA CCGG TATT CCAG CCCGTATCGCCAAAA TERM 2802 2544083 - 2544098 + r 76 -2.6 -5.38047 | overlap 2544080 2544084 GGGAACTCCACCCAA TCTAAT TGAT ATTAGG TTTTTTCTATAAATC YP_2292 2545084 - 2544146 - | hypothetical protein YP_2293 2546166 - 2545111 - | hypothetical protein TERM 2803 2546194 - 2546215 + r 83 -8.7 -4.16943 | opp_overlap 2546193 2546194 TATAAATAGCAATAT CGTGGTGAG TCAT TTCACCGCG TTTTCGAGTATCAAA malG4 2547137 - 2546313 - | sugar ABC transporter, permease protein malF4 2548013 - 2547138 - | sugar ABC transporter, permease protein TERM 2804 2547953 - 2547925 - G 70 -2.5 -4.90778 | gap 1, opp_overlap 2547933, overlap 2547933 GCGAGCCAAATAAAA GGATAAAACCAG AATATG CTGGTAT-ATCC CAGATAAGAGGCCGC ugpB3 2549558 - 2548122 - | putative solute-binding protein TERM 2805 2549495 - 2549521 + g 72 -3.7 -4.79451 | opp_overlap 2549495 2549496 2549498, overlap 2549490 2549498 GCGTAATTTCGATAA TGATGTGAAGT ATTTC ACATCTCATCA TTTTATGTTTAACGT purR6 2549680 - 2550720 + | LacI family transcriptional regulator manB2 2550692 - 2552125 + | phosphomannomutase TERM 2806 2552198 - 2552165 - f 100 -14.7 -4.93177 | overlap 2552169 TAAAAACTAATAAAA TCAACCTCGCGTTCA TTAT TGAACGCGAGGGTAA ATAGCAGCATATTGT TERM 2807 2552194 - 2552169 - f 100 -17.7 -3.84772 | overlap 2552165 AACTAATAAAATCAA CCTCGCGTTCA TTAT TGAACGCGAGG GTAAATAGCAGCATA mtlK 2552183 - 2553304 + | putative mannitol transport ATP-binding protein YP_2300 2554114 - 2553569 - | hypothetical protein YP_2301 2554764 - 2554372 - | hypothetical protein YP_2302 2555328 - 2554924 - | hypothetical protein TERM 2808 2555171 - 2555195 + g 70 -2.2 -4.98255 | gap 2 TTCTCTGTACAGATT GACC-AGC-TAG TCT CTGTGCTCGGTC TTTTTCTCGTTCCGC YP_2303 2555637 - 2555470 - | hypothetical protein TERM 2809 2555795 - 2555824 + r 95 -12.9 -3.16055 | gap 1, opp_overlap 2555799 2555800, overlap 2555783 2555800 ATCTTAGAGTTTGAA GCAAGCCCCAGCCA AAT TGGCCGGG-CTTGC TTCATCACGGGTTTC TERM 2810 2555820 - 2555799 - R 71 -8.7 -3.35371 | gap 1, opp_overlap 2555795 2555783 2555800, overlap 2555800 TAGAGTTTGAAGCAA GCCCCAGCCA AAT TGGCCGGG-C TTGCTTCATCACGGG YP_2304 2556037 - 2555840 - | hypothetical protein fhaB1 2563771 - 2556047 - | putative hemolysin TERM 2811 2556086 - 2556098 + g 73 -3.3 -5.00616 | overlap 2556087 GTTAGAAATATACTT ACCTG TTT CAGGA TTTTTTACACCAAAG TERM 2812 2562941 - 2562955 + g 73 -9.2 -3.69092 | CACGGTTGGCCGCGG GCTGCC ATC GGCGGC TTTGGCGTTAATGTT fhaC2 2565615 - 2563927 - | putative hemolysin activator protein hmp1 2567233 - 2566268 - | putative dioxygenase beta subunit TERM 2813 2566607 - 2566622 + g 80 -10.4 -3.69395 | ACCGCGTTGTGTTGC CGCCGT TTTA ACGGCG TTATTCAATGATACC TERM 2814 2567010 - 2567034 + g 100 -16.5 -3.53091 | GAATGCTCACTCAGG CGCACCGCTAT TTG GTAGCGGTGCG TTTCAAAAGGAGAAT TERM 2815 2567317 - 2567293 - R 100 -14.3 -3.54951 | TACGCTATCAGAGAA GACCCACAGCG GCT CACTGTGGGCC ATAATAATAGGCTAC hcaA11 2568537 - 2567329 - | putative dioxygenase alpha subunit betT2 2570051 - 2568570 - | putative transporter TERM 2816 2570601 - 2570567 - R 78 -10 -3.45031 | overlap 2570562 2570569 TTCTCAAAAAGTTAA TAGGCATTCGTCCGAT TAA AACGGACGCATACCCA AACCCGCCAACGCAG TERM 2817 2570599 - 2570569 - R 78 -10.4 -3.2916 | overlap 2570567 2570562 CTCAAAAAGTTAATA GGCATTCGTCCGAT TAA AACGGACGCATACC CAAACCCGCCAACGC YP_2310 2570764 - 2570582 - | hypothetical protein TERM 2818 2570708 - 2570734 + g 78 -10.1 -3.82218 | gap 1, opp_overlap 2570696, overlap 2570702 2570707 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCTCTGCCT leuB1 2571930 - 2570833 - | tartrate dehydrogenase lysR14 2572021 - 2572962 + | LysR family transcriptional regulator TERM 2819 2573074 - 2573060 - f 74 -4.2 -5.08088 | AACGTGGAATAAAAA CTCAGG ACG CTTGAG AGGTAAAAATTACCC purR7 2573209 - 2574213 + | LacI family transcriptional regulatoryprotein rbsC1 2575338 - 2574346 - | putative sugar transport system, permease protein rbsA2 2576825 - 2575335 - | putative sugar transport system, ATP-binding protein rbsB7 2577782 - 2576865 - | sugar binding protein precursor gutB 2579144 - 2577957 - | putative zinc-binding dehydrogenase TERM 2820 2579069 - 2579079 + g 71 -5.4 -4.56597 | overlap 2579063 GTATGGATACAATGT TGAC GTT GTCA TTTTTGAACAAACCA TERM 2821 2579558 - 2579548 - R 86 -6.8 -4.98672 | overlap 2579541 TTCAAAAAGACAAAA CGTC GGT GACG GTGAGAAATAAAAAA YP_2318 2580434 - 2579766 - | hypothetical protein TERM 2822 2580268 - 2580281 + g 73 -5.3 -4.614 | opp_overlap 2580268, overlap 2580259 CCGTTGTGATAACAA TCATC TATA GATGA TTTTATATCCTTCAA YP_2319 2581172 - 2580630 - | hypothetical protein TERM 2823 2581369 - 2581346 - R 100 -11 -4.81083 | GGTAACCATTAAAAA CCCCCAGC AAATCACG GCTGGGGG AAGATAAAAGCACGG mMT12 2582348 - 2581410 - | hypothetical protein TERM 2824 2582603 - 2582588 - R 100 -9 -5.82316 | opp_overlap 2582587 2582588 AGCAGGCAAAAAAAA TCCGCT CGAA AGCGGA CTTTTATCAGACACA ompX 2583194 - 2582664 - | outer membrane protein X TERM 2825 2583896 - 2583879 - g 76 -6.9 -4.57837 | ACATGTCGTTAAAAA CGGTGCC ATTA GGCATCG CTGTAGCACTGGAAT TERM 2826 2584233 - 2584244 + G 73 -5.8 -4.57755 | TCTTGCCCATTGCAC TGGC CGTC GCCA TTTTGTCTACTGCAT rhaT11 2583593 - 2584480 + | threonine and homoserine efflux system rimI1 2584496 - 2584993 + | hypothetical protein TERM 2827 2585634 - 2585644 + G 70 -8.2 -3.65991 | overlap 2585633 TGGCTGCGGGCAACG GGGC TAC GCCC TTATCTTGCCCCCCT tam 2585016 - 2585792 + | trans-aconitate 2-methyltransferase dps 2586049 - 2586552 + | DNA starvation/stationary phase protection protein Dps TERM 2828 2586587 - 2586603 + F 76 -10.8 -2.71364 | opp_overlap 2586587 CTATTACGCTGAACA GGGCCG TTAAC CGGCCC TGCTTGCCGCCCTCC TERM 2829 2586603 - 2586587 - f 79 -10.8 -3.04792 | opp_overlap 2586587 CTATTACGCTGAACA GGGCCG TTAAC CGGCCC TGCTTGCCGCCCTCC TERM 2830 2587497 - 2587467 - g 78 -13.4 -2.65354 | opp_overlap 2587464, overlap 2587464 2587463 2587472 CGCAGTTGAAAGCGA CCCAAGGCGAAAAT GCG ATTGTCACCTTGGG CTATGCGTTAAATCC YP_2326 2586872 - 2587999 + | hypothetical protein glnH 2588569 - 2589312 + | glutamine ABC transporter periplasmic protein glnP 2589347 - 2590003 + | glutamine ABC transporter permease protein TERM 2831 2590322 - 2590312 - g 79 -6.8 -4.63218 | overlap 2590313 TTTGGCCCAACAAAA GTGC GTG GCAC ATCCAAGGAAGAGGC glnQ 2590000 - 2590722 + | glutamine ABC transporter ATP-binding protein TERM 2832 2590829 - 2590801 - T 95 -13.2 -3.05997 | opp_overlap 2590801, overlap 2590796 TGGCTAGAAATCACA CTGGCGGACATC TTACT GATACCCGCCAG TTTTTTATAGGCTAT TERM 2833 2590801 - 2590829 + T 100 -8.8 -5.26918 | opp_overlap 2590801 2590796 TGGCTAGAAATCACA CTGGCGGACATC TTACT GATACCCGCCAG TTTTTTATAGGCTAT atoS2 2592254 - 2590962 - | putative chemotactic transducer TERM 2834 2591122 - 2591134 + g 71 -6.3 -4.39989 | overlap 2591113 ATCGCGGCGGTAACC CCATT CTG AATGG TTTTAGTCATTTGCT TERM 2835 2592426 - 2592400 - R 72 -10.1 -2.88849 | gap 1, opp_overlap 2592408, overlap 2592399 2592415 2592416 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGAA TGGCGCGGTTCG AGCCTACATGGATGT YP_2331 2594033 - 2593023 - | putative SAM-dependent methyltransferase TERM 2836 2593940 - 2593954 + g 91 -4.2 -5.63517 | overlap 2593942 AGCGATGACGATTTC GGGGAT GCA ATCCGC TTTTTTCTTTGGGGA porA 2594321 - 2594581 + | hypothetical protein TERM 2837 2594747 - 2594725 - T 100 -9.1 -4.78848 | CTTGGAAATACAAAA GCCCATCCG TTCAT CTGATGGGC TCAGACTGCTGACAA TERM 2838 2594836 - 2594810 - T 84 -10.1 -3.82218 | gap 1, opp_overlap 2594819, overlap 2594811 2594826 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 2839 2594837 - 2594811 - T 72 -10.1 -2.88849 | gap 1, opp_overlap 2594819, overlap 2594810 2594826 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT TERM 2840 2594915 - 2594937 + T 100 -9.1 -4.93296 | TTGTCAATAACCTCA GCCCATCCG TTCAT CTGATGGGC TTTTTCTGGTGGTGA trpD2 2595922 - 2594963 - | hypothetical protein caiC 2597403 - 2595988 - | O-succinylbenzoic acid--CoA ligase TERM 2841 2596247 - 2596235 - G 73 -3.3 -4.93661 | ACAGGAATAACAAAA GCGTG CTG CACCC CTGAATACTGCAATA menC 2598362 - 2597391 - | O-succinylbenzoate synthase menB 2599219 - 2598362 - | naphthoate synthase TERM 2842 2598659 - 2598682 + g 78 -2.3 -5.24129 | GGCATCATATTGGCG GCACAGGAA CCAAAT TTCCCGCGC TTTTTTCTGGCCGAC mhpC3 2600051 - 2599233 - | acyl-CoA thioester hydrolase YfbB TERM 2843 2599296 - 2599281 - G 72 -4 -4.84359 | gap 1, overlap 2599283 TGACTGTGACAAAAA TGC-CAG CAC CTGTGCA GCAAAAGCACCGGGA menD 2601751 - 2600048 - | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase menF 2603346 - 2601979 - | menaquinone-specific isochorismate synthase TERM 2844 2602124 - 2602158 + g 70 -9.2 -3.6502 | TGCTGCCCATCGACT CGCGCTGAACGCAGGG CCA CACTGAATTCAGTGCG TTTAAGTGACAAATA YP_2340 2604503 - 2603859 - | hypothetical protein elaB 2605405 - 2605058 - | hypothetical protein YP_2342 2605550 - 2605717 + | hypothetical protein YP_2343 2606226 - 2606014 - | hypothetical protein edd 2608163 - 2606292 - | phosphogluconate dehydratase TERM 2845 2606787 - 2606803 + g 71 -5.7 -4.4078 | AATAACCTGATGCTC CCGTGGC ACT GCCGAGG TTTTCATTACCGCCC TERM 2846 2606878 - 2606866 - G 73 -3.3 -4.91109 | CCCTGAGCAGAAAAA GGCTG TTC CAGAC TGGCGATCACCGTCG proP26 2610072 - 2608717 - | putative sugar transporter TERM 2847 2609210 - 2609172 - G 89 -10.3 -4.40333 | gap 1, overlap 2609174 2609202 CGGAAATAACATAAA TACCGGCGGTGGTAGCCA CAAA TGGCAAC-ACCGCCAGAA TACCGACGGATGCCA TERM 2848 2609208 - 2609174 - G 85 -12.9 -3.79177 | gap 1, overlap 2609172 2609202 GAAATAACATAAATA CCGGCGGTGGTAGCCA CAAA TGGCAAC-ACCGCCAG AATACCGACGGATGC TERM 2849 2610320 - 2610349 + r 76 -10.8 -2.50195 | overlap 2610319 2610317 ATAATTTTCGATTGA CGCGTCAGATAA ACTTTA TTTTCTGACGCG CTATTACTCATGGAT TERM 2850 2610386 - 2610373 - R 70 -5.3 -4.50058 | CATGGATAACTAAAA TCACT AAAG AGTGA TTGAGGTTATTGACA TERM 2851 2610465 - 2610491 + r 72 -10.1 -2.88849 | gap 1, opp_overlap 2610454, overlap 2610460 2610466 ACATCCATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCTCTGCC TERM 2852 2610466 - 2610492 + r 84 -10.1 -3.82218 | gap 1, opp_overlap 2610454, overlap 2610460 2610465 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCTCTGCCT ldhA2 2611529 - 2610579 - | putative D-isomer specific 2-hydroxyacid dehydrogenase family protein TERM 2853 2611765 - 2611748 - R 80 -2.7 -5.44721 | overlap 2611751 ACCATGTTAAAAAAA CATGTTA CCGG TAACGTG ACCAGCTTATCATTA TERM 2854 2611991 - 2611963 - R 73 -5.3 -4.72272 | opp_overlap 2611968, overlap 2611968 CGTGGTGATGAAAAA TAACAGGAAACCG AAT CGACTTCCCTTTA GTCTCAGATAGTCCC TERM 2855 2611986 - 2611968 - R 70 -7.4 -3.84027 | opp_overlap 2611968, overlap 2611963 TGATGAAAAATAACA GGAAACCG AAT CGACTTCC CTTTAGTCTCAGATA purR8 2612987 - 2611995 - | LacI family transcriptional regulatory protein TERM 2856 2613123 - 2613142 + H 80 -10.6 -3.5511 | overlap 2613122 CGGCAGTTACACCGT CGGGAGGG GATG CCCGCCCG TATTTCTCAATGGCA YP_2349 2613456 - 2614739 + | putative lipoprotein TERM 2857 2615384 - 2615358 - f 84 -10.1 -3.82218 | gap 1, opp_overlap 2615367, overlap 2615359 2615374 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 2858 2615385 - 2615359 - f 72 -10.1 -2.88849 | gap 1, opp_overlap 2615367, overlap 2615358 2615374 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT idnO 2615393 - 2616262 + | gluconate 5-dehydrogenase TERM 2859 2616459 - 2616447 - g 100 -9.1 -5.1615 | overlap 2616449 CCAATATCCAAAAAA TGGCC GCC GGCCA GCCACTGAACGATCA idnK 2616311 - 2616847 + | putative thermosensitive gluconokinase ebgC2 2616925 - 2617392 + | hypothetical protein YP_2353 2618965 - 2617730 - | hypothetical protein TERM 2860 2619109 - 2619082 - R 100 -14.2 -5.23292 | opp_overlap 2619077 CCAGATAAAACAAAA CCCCCTGTAAGC CGAT ACTCACAGGGGG TAGGGTCTATCTCGA nuoN 2620619 - 2619156 - | NADH dehydrogenase subunit N nuoM 2622158 - 2620626 - | NADH dehydrogenase subunit M TERM 2861 2621950 - 2621938 - G 70 -9.1 -3.61536 | AATCTAATGCCGAAA CGTGG GAT CCACG GCACATTATAATATG nuoL 2623997 - 2622198 - | NADH dehydrogenase subunit L TERM 2862 2623098 - 2623077 - G 72 -8.1 -3.87815 | gap 1 GCCCAGCGCCAGAAA CATGTAGCCA ATC TGGCT-CATG GTGGAGTACGCCAAC nuoK 2624341 - 2624039 - | NADH dehydrogenase subunit K nuoJ 2624883 - 2624338 - | NADH dehydrogenase subunit J nuoI 2625438 - 2624896 - | NADH dehydrogenase subunit I nuoH 2626430 - 2625453 - | NADH dehydrogenase subunit H nuoG 2629171 - 2626427 - | NADH dehydrogenase subunit G TERM 2863 2627295 - 2627285 - G 70 -8.2 -3.67173 | opp_overlap 2627278, overlap 2627275 ATAAACCTGGAAGAA GCGC TGT GCGC GGCCTTCCTGATTGA nuoF 2630643 - 2629258 - | NADH dehydrogenase I subunit F TERM 2864 2630514 - 2630524 + g 86 -8.2 -4.7373 | ACGCTTTTTCTGCCC CGGC ATA GCCG TTTTTGCTGCGATAC nuoE 2631203 - 2630640 - | NADH dehydrogenase subunit E TERM 2865 2631176 - 2631188 + g 70 -3.3 -4.75372 | CAAGGCTTCCGTTAT GAGCC TGA GTCTC TTTTTGATCACTCAT nuoD 2633002 - 2631206 - | bifunctional NADH:ubiquinone oxidoreductase subunit C/D TERM 2866 2632905 - 2632895 - G 79 -8.2 -4.30719 | TGCTTGCACAACAAA GGCC TCT GGCC CAAAACGGTTCGACA nuoB 2633820 - 2633143 - | NADH dehydrogenase subunit B nuoA 2634422 - 2633922 - | NADH dehydrogenase subunit A TERM 2867 2634604 - 2634583 - R 74 -10.3 -2.57211 | overlap 2634582 ACTCCTTTCGATAAC CTTTTGTCA ACTT TGACAAAAG TAACTACACATTAAT TERM 2868 2634748 - 2634760 + r 70 -7.7 -3.65522 | ACTATACCATTGTCT CAGGA ATA TCCTG TTCTTCCACTCAGTA TERM 2869 2634761 - 2634785 + r 78 -2.2 -5.52384 | gap 1, overlap 2634763 CTCAGGAATATCCTG TTCT-TCCACT CAGT AGTGGACAGTA TTTTTTTGATCCAGG pecT 2636044 - 2635100 - | LysR family transcriptional regulator YP_2368 2636767 - 2636495 - | hypothetical protein TERM 2870 2637774 - 2637762 - g 80 -10.5 -3.6608 | overlap 2637740 AGCATGCGATTCAAA CCGCC TTG GGCGG CTATCAGAGCATTAG aat2 2636900 - 2638114 + | aminotransferase AlaT YP_2370 2638265 - 2638858 + | hypothetical protein TERM 2871 2638861 - 2638888 + T 100 -15.8 -3.28924 | TTCACTGGATTGATC TTTATAGCCTGC TTGT GCAGGCTATAAA TTATGACAAGAGATA YP_2371 2639174 - 2638905 - | hypothetical protein TERM 2872 2639068 - 2639058 - G 71 -6.8 -4.15222 | ATTTTCGGCAAGAAA CTGC TCA GCAG TCATCGCATGAACAT citT2 2641093 - 2639201 - | putative ion transport protein TERM 2873 2641261 - 2641245 - R 100 -9.4 -5.42131 | opp_overlap 2641244 TAACGATACAAAAAA GGTGCC GTCGA GGCACC CTACTATTGGCTTAT YP_2373 2641981 - 2641325 - | putative phosphatase YP_2374 2642640 - 2642146 - | hypothetical protein YP_2375 2643403 - 2642948 - | hypothetical protein TERM 2874 2643289 - 2643270 - G 76 -7.8 -4.37534 | opp_overlap 2643269 2643270 AAACGGATACCAAAA CGGGTCAC TACC GTGACACG ATTCTCGGGGAACAC YP_2376 2643644 - 2643835 + | hypothetical protein ackA 2643825 - 2645027 + | acetate kinase TERM 2875 2645316 - 2645285 - g 72 -3.7 -4.7497 | overlap 2645287 TCCATGGAGCAAAAA GGGGTAAGCTTGA GCGTAT TCAAGCCTATCGC CCAGCCACGTGCGGG pta 2645195 - 2647348 + | phosphate acetyltransferase TERM 2876 2647440 - 2647466 + T 72 -10.1 -2.84602 | gap 1, opp_overlap 2647429, overlap 2647435 2647441 ACATCCATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCCCTGCC TERM 2877 2647441 - 2647467 + T 84 -10.1 -3.74872 | gap 1, opp_overlap 2647429, overlap 2647435 2647440 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCCCTGCCT TERM 2878 2647526 - 2647557 + T 79 -10.9 -3.05463 | opp_overlap 2647532, overlap 2647532 GGGTTTGTCAGCAGT CTGAAACGCCAGC CTCTGC GCTGGCGTTTTTG TTACATCAGACACGT TERM 2879 2647532 - 2647551 + T 100 -10.7 -5.10461 | opp_overlap 2647532, overlap 2647526 GTCAGCAGTCTGAAA CGCCAGC CTCTGC GCTGGCG TTTTTGTTACATCAG TERM 2880 2647551 - 2647532 - T 84 -10.7 -3.58343 | opp_overlap 2647526 2647532 GTCAGCAGTCTGAAA CGCCAGC CTCTGC GCTGGCG TTTTTGTTACATCAG TERM 2881 2647591 - 2647577 - T 75 -7.1 -4.26589 | opp_overlap 2647576 2647584 ATCAGACACGTAAAA CAGGG AGCCG CCCTG CATTCTGGGGCGGTT TERM 2882 2647584 - 2647604 + T 87 -8.2 -4.50358 | opp_overlap 2647577, overlap 2647576 ACGTAAAACAGGGAG CCGCCCTG CATTC TGGGGCGG TTTTCCTCTTTAGGT purR9 2648750 - 2647614 - | LacI-family transcriptional regulatory protein TERM 2883 2647973 - 2647992 + g 81 -6.4 -4.93296 | overlap 2647967 TGGCCGCATCGGGCG TGGTGACC GTTT GGTCAGCA TTTTTGTAATGCTCG TERM 2884 2648924 - 2648890 - H 100 -15.2 -3.9712 | opp_overlap 2648914, overlap 2648908 2648909 TCATGGCATGACAAA TGATAGCGCTATCACA AAT TTTGATAGCGCTACCA GATAGCGCTATCAAT TERM 2885 2648940 - 2648908 - H 77 -8.5 -3.96624 | opp_overlap 2648914, overlap 2648890 2648909 TAGCGCTATCACAAA TTTTGATAGCGCTAC CAG ATAGCGCTATCAATT GAGATCCAGATCACA TERM 2886 2648939 - 2648909 - H 86 -12 -2.97653 | opp_overlap 2648914, overlap 2648890 2648908 AGCGCTATCACAAAT TTTGATAGCGCTAC CAG ATAGCGCTATCAAT TGAGATCCAGATCAC TERM 2887 2648914 - 2648934 + H 70 -9.8 -2.53876 | opp_overlap 2648890 2648909 2648908 TATCACAAATTTTGA TAGCGCTA CCAGA TAGCGCTA TCAATTGAGATCCAG ptsN1 2649015 - 2649458 + | phosphotransferase enzyme II, A component sgaB 2649627 - 2649914 + | phosphotransferase system component IIB of unknown specificity ulaA 2649927 - 2651183 + | ascorbate-specific PTS system enzyme IIC TERM 2888 2651214 - 2651231 + T 100 -12.7 -3.62572 | AAGACGTCACCATCA CCCCCTC CTTG GAGGGGG TTTAAACTGATAATA TERM 2889 2651252 - 2651276 + T 100 -6.4 -5.7946 | opp_overlap 2651252 ACTGATAATAAAAAA CCAAAGCGCT TTAGC GGGGCTTTGG TTTTTTTATTGAGCA TERM 2890 2651276 - 2651252 - T 90 -5.7 -5.56673 | opp_overlap 2651252 ACTGATAATAAAAAA CCAAAGCGC TTTAGCG GGGCTTTGG TTTTTTTATTGAGCA mutT4 2651848 - 2651300 - | hypothetical protein YP_2384 2652657 - 2652070 - | phosphodiesterase TERM 2891 2652613 - 2652603 - G 71 -6.8 -4.15543 | overlap 2652605 CAAAGATCGCCAAAA CACG TTC CGTG GCCGGTAACGAACCA rtn2 2653537 - 2652845 - | EAL domain-containing protein TERM 2892 2653671 - 2653683 + H 100 -4.1 -6.47325 | GTTGAGCGGTTTATT GAGTC CCT GATTC TTTTTTTTATTTTTT YP_2386 2653885 - 2654799 + | nucleoside-diphosphate sugar epimerase hisP 2655720 - 2654923 - | histidine/lysine/arginine/ornithine transporter subunit hisM 2656450 - 2655734 - | histidine transport system permease protein HisM TERM 2893 2656182 - 2656164 - G 83 -3.1 -5.42259 | CCACTGCGAAAAAAA GCATTGA GCAGA TCATTGC CTCGGATTATCTCCA hisQ 2657133 - 2656447 - | histidine transport system permease protein HisQ TERM 2894 2656759 - 2656747 - G 88 -10.5 -4.21922 | opp_overlap 2656744 2656747 GGAGGTAAAACCAAA GGCCG TCG CGGCC TCAATTTGCCCTTTA hisJ 2658291 - 2657236 - | histidine-binding periplasmic protein of high-affinity histidine transport system TERM 2895 2658379 - 2658350 - R 90 -7.1 -5.18995 | overlap 2658351 AACAGAATACAAAAA CCCTACTACAGCA CCAT CGCTGTTGCAGGA TCATTGTGGAGCATA TERM 2896 2658378 - 2658351 - R 73 -8.4 -3.68957 | overlap 2658350 ACAGAATACAAAAAC CCTACTACAGCA CCAT CGCTGTTGCAGG ATCATTGTGGAGCAT ubiX 2659130 - 2658543 - | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase TERM 2897 2659284 - 2659255 - R 90 -7.2 -5.15167 | gap 2, opp_overlap 2659255 CACCATGAATAAAAA GGTGC-ACC-GCGC CTAA ACGCAGGTTGCACC TTTTTGGCTCATTCT TERM 2898 2659255 - 2659284 + r 77 -6.5 -4.71382 | gap 2, opp_overlap 2659255 CACCATGAATAAAAA GGTGCA-CC-GCG CCTAAA CGCAGGTTGCACC TTTTTGGCTCATTCT TERM 2899 2659304 - 2659323 + r 76 -10.8 -2.57344 | overlap 2659303 2659306 TGGCTCATTCTGTTT TATGACGG ATAC CCGTCATA CTTCTACCCGCCATA purF 2660879 - 2659362 - | amidophosphoribosyltransferase cvpA 2661401 - 2660892 - | colicin V production protein TERM 2900 2661210 - 2661200 - G 79 -6.8 -4.71426 | opp_overlap 2661199 TCGCGATGAACAAAA TGCC GAT GGCA ATTCCGTTGCGAACA dedD 2662435 - 2661713 - | hypothetical protein TERM 2901 2661955 - 2661967 + g 80 -4.7 -5.06414 | opp_overlap 2661951, overlap 2661954 GGACAACATAAGCCT GCCCC ACT GGCGC TTTTTCTTCCACCGG TERM 2902 2662012 - 2662033 + g 79 -5.1 -5.05113 | GCTTAGGTTTCACTT CCAGCGG TTTTTTCT CTGCTGG TTTTGTTTCTATCGG folC 2663937 - 2662555 - | bifunctional folylpolyglutamate synthase/ dihydrofolate synthase TERM 2903 2663835 - 2663811 - G 90 -13.5 -3.93262 | opp_overlap 2663803 2663798 GCTCAAGATAGCAAA GCCACGCGGCC AAA GGCGACGTGGC TTGGGGAGTTTGATG TERM 2904 2664098 - 2664070 - R 76 -10.4 -2.90804 | gap 1, opp_overlap 2664070, overlap 2664069 ATAAGGCACAATAAC CGGGCACCA-TCT TACA AGAGTGATGCCCG TTGAGTTAATCAGAC accD 2665022 - 2664108 - | acetyl-CoA carboxylase subunit beta TERM 2905 2665143 - 2665107 - R 78 -2.2 -5.4505 | gap 1, overlap 2665118 2665120 CTCTCCAATAAAAAA TGCCTGAGATACA-CGC CAGT GCGACGTGGCTAAGGCA CCGAAACTTGGATTG dedA1 2665915 - 2665253 - | hypothetical protein TERM 2906 2666117 - 2666096 - R 73 -5.1 -4.58395 | overlap 2666102 GTCATCCGCCAAAAA CAAAGGCCC CATA GGAACTTTG GGTAACGCGAAGTGG truA 2666953 - 2666072 - | tRNA pseudouridine synthase A TERM 2907 2666868 - 2666884 + g 91 -6.5 -5.1356 | opp_overlap 2666868 AACGCAATTTTCAAA CCGGC CACTTCT GCCGG TTTTTCTTGCTGAGC asd1 2667963 - 2666953 - | putative semialdehyde dehydrogenase TERM 2908 2667089 - 2667125 + g 71 -10.7 -3.11459 | opp_overlap 2667089 2667087 CGAACGCAACCAATA CTCAGGGCATCGCTGCC GGA GGCGTCGCTGACCTGGG TTGGATAATCATCTT TERM 2909 2668071 - 2668093 + r 80 -9.1 -4.0257 | opp_overlap 2668073, overlap 2668063 2668073 ACGTTATTGAACAGC AAGGGCGGT AACAC ACCGCCCTG TTATTAATTTTTACG TERM 2910 2668091 - 2668073 - R 95 -12.4 -3.38072 | opp_overlap 2668071 2668063 2668073 GTTATTGAACAGCAA GGGCGGTA ACA CACCGCCC TGTTATTAATTTTTA TERM 2911 2668073 - 2668091 + r 90 -11.7 -3.58785 | opp_overlap 2668073, overlap 2668071 2668063 GTTATTGAACAGCAA GGGCGGT AACAC ACCGCCC TGTTATTAATTTTTA pdxB 2669320 - 2668133 - | erythronate-4-phosphate dehydrogenase araC5 2670092 - 2669307 - | AraC family transcriptional regulator rhaT12 2670318 - 2671235 + | hypothetical protein flk 2671521 - 2672558 + | flagella biosynthesis regulator TERM 2912 2672660 - 2672631 - T 93 -10.9 -4.22132 | opp_overlap 2672637, overlap 2672637 TTAAATACAAAAATA CAAAAAGCGACTA ATAT CAGTCGCTTTTTA ACAAACCGCTTACGC TERM 2913 2672637 - 2672654 + T 76 -7 -4.56597 | opp_overlap 2672637 2672631 ACAAAAATACAAAAA GCGACT AATATC AGTCGC TTTTTAACAAACCGC TERM 2914 2672654 - 2672637 - T 100 -7.7 -5.38398 | opp_overlap 2672637, overlap 2672631 ACAAAAATACAAAAA GCGACTA ATAT CAGTCGC TTTTTAACAAACCGC TERM 2915 2672874 - 2672828 - T 75 -10.5 -2.87564 | gap 1, opp_overlap 2672840 2672861 2672867, overlap 2672814 2672840 TCATTCTTTTATACA GCATATAAAAAAGCATGCAGAA TATC TTCCACATGCTTTTTT-TAAGC AATTTAGACAGCTTA TERM 2916 2672840 - 2672863 + T 84 -3.8 -5.41746 | opp_overlap 2672814 2672840 2672828, overlap 2672861 ACAGCATATAAAAAA GCATGCAGAA TATC TTCCACATGC TTTTTTTAAGCAATT TERM 2917 2672863 - 2672840 - T 100 -8.2 -5.40625 | opp_overlap 2672840 2672861, overlap 2672814 2672828 ACAGCATATAAAAAA GCATGCAGAA TATC TTCCACATGC TTTTTTTAAGCAATT smfA 2673430 - 2672900 - | hypothetical protein TERM 2918 2674144 - 2674183 + H 72 -9.2 -3.14344 | gap 1 TCACTTATAACGTGG GGGC-GCTGTCGCCCTTCA AGA TGCAGGGAGTTAGCTGCCC TTGCTCACCCCAGTC racX 2674218 - 2674913 + | putative aspartate/glutamate racemase TERM 2919 2675086 - 2675067 - T 100 -12.2 -5.24003 | AATAAAAAGTAAAAA GCCTACGA TCTC TCGTAGGC TTCAGACTGCTGACA TERM 2920 2675176 - 2675150 - T 84 -10.1 -3.82218 | gap 1, opp_overlap 2675159, overlap 2675151 2675166 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 2921 2675177 - 2675151 - T 72 -10.1 -2.88849 | gap 1, opp_overlap 2675159, overlap 2675150 2675166 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT TERM 2922 2675281 - 2675250 - T 90 -11.6 -3.62046 | opp_overlap 2675256 GCACTTTGTCAATAA CCTCAAGCCTACGA TCTC TCGTAGGCTTTGGG GAGTAAATCTGAATC TERM 2923 2675256 - 2675275 + T 91 -12.2 -3.55761 | opp_overlap 2675250 TGTCAATAACCTCAA GCCTACGA TCTC TCGTAGGC TTTGGGGAGTAAATC fabB 2676544 - 2675321 - | 3-oxoacyl-(acyl carrier protein) synthase I TERM 2924 2678004 - 2677990 - g 76 -5.7 -4.65916 | GCTAGCGCAACAAAA TGGCA TGACC TGCCA CTACCAACATGAACT mnmC 2676716 - 2678785 + | 5-methylaminomethyl-2-thiouridine methyltransferase YP_2408 2679244 - 2678963 - | hypothetical protein YP_2409 2679841 - 2679299 - | hypothetical protein TERM 2925 2679719 - 2679706 - G 82 -6.7 -4.77438 | overlap 2679709 AGCCATGAGCAAAAA TCACC CGAT GGTGA GGAGATTCTTCATCG TERM 2926 2679895 - 2679867 - R 82 -10.3 -3.66883 | GTAAGAGAGGGTAAA CACCGCTAAAGTC ACC GTATTTAGCGGTG GTGGGTGCCTAAATT YP_2410 2680747 - 2679941 - | hypothetical protein TERM 2927 2680663 - 2680633 - G 74 -11.1 -3.04263 | gap 1, overlap 2680652 ATCCCACCGCTAACA GTGCGGGGACGGTT AACA AGCCGCCCCCGC-C GGCAATGGAATCAAT mepA 2681620 - 2680751 - | penicillin-insensitive murein endopeptidase TERM 2928 2681452 - 2681430 - GR 75 -9.1 -3.57462 | GACTCGAGCGGCAAA GGCTGCGCG CCAAT CACGCAACC ATTAGCAAAGCCACC aroC 2682672 - 2681584 - | chorismate synthase TERM 2929 2682268 - 2682278 + gr 71 -8.2 -3.54424 | overlap 2682267 AGCGCCCGCCGCCAC CCGC ATC GCGG TTTCGCGGGCTGAAG hemK2 2683747 - 2682746 - | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase YP_2414 2683967 - 2684578 + | hypothetical protein YP_2415 2684906 - 2684751 - | hypothetical protein TERM 2930 2684951 - 2684932 - R 100 -15 -3.8579 | AGCCAATAAGCGAAA GCGCGGCA AGAA TGCCGCGC CAGTTAGACGTTGAT sixA 2685511 - 2685020 - | phosphohistidine phosphatase fadJ 2688406 - 2686079 - | multifunctional fatty acid oxidation complex subunit alpha TERM 2931 2686837 - 2686854 + g 71 -7 -4.21827 | AGAACCCAGCGCGAT CAGCCA CCACAA TGGCTG TTTTACCCTGTTTCC TERM 2932 2687004 - 2686979 - G 71 -11.2 -2.78813 | overlap 2686964 2686962 2686978 2687002 GTGCAGGCCAATAAC CTGCTCTGGC CGTTGC GCCAAAGCAG CAATCTGGCTGATGG TERM 2933 2687654 - 2687625 - G 71 -5.1 -4.47456 | gap 1, overlap 2687627 ATACGGAATAATAAA GC-TTTACCCAACG GCC CACTGAGTAAACGC TCCTGCCATGGTAAT fadI 2689713 - 2688403 - | 3-ketoacyl-CoA thiolase TERM 2934 2688636 - 2688665 + g 75 -9.3 -3.85698 | opp_overlap 2688635 2688633 CGCGAGCAAAAGTAT CACTGGCAAACAT TTTC AGGTTAGCCAGTG TTTGTGCGGCGAAGG TERM 2935 2689777 - 2689765 - R 79 -7.7 -4.34559 | AAAGATAACAAATAA CAGGT CTG ACCTG ATCCGAACATTGTTA TERM 2936 2689963 - 2689943 - R 100 -12.6 -3.90425 | opp_overlap 2689943 CATCTAAAGTAATAA CGCGAAGC AAAAG GCTTCGCG TTGGTCAGGTATGTA TERM 2937 2689943 - 2689963 + r 93 -12.6 -3.18239 | opp_overlap 2689943 CATCTAAAGTAATAA CGCGAAGC AAAAG GCTTCGCG TTGGTCAGGTATGTA YP_2419 2690302 - 2690000 - | hypothetical protein fadL 2690704 - 2691975 + | long-chain fatty acid outer membrane transporter TERM 2938 2692030 - 2692003 - T 100 -17.2 -3.07113 | opp_overlap 2692003 2692005 2692010, overlap 2692005 2692010 CATCACCTTATCCAA TAGAAAAGCGCC TGAT GGCGCTTTTCTA TCTTGAATACGGCGG TERM 2939 2692003 - 2692030 + T 100 -17.2 -3.08679 | opp_overlap 2692003 2692005 2692010, overlap 2692005 2692010 CATCACCTTATCCAA TAGAAAAGCGCC TGAT GGCGCTTTTCTA TCTTGAATACGGCGG TERM 2940 2692028 - 2692005 - T 100 -15.4 -3.09327 | opp_overlap 2692005 2692003 2692010, overlap 2692003 2692010 TCACCTTATCCAATA GAAAAGCGCC TGAT GGCGCTTTTC TATCTTGAATACGGC TERM 2941 2692005 - 2692028 + T 100 -15.4 -3.10344 | opp_overlap 2692003 2692005 2692010, overlap 2692003 2692010 TCACCTTATCCAATA GAAAAGCGCC TGAT GGCGCTTTTC TATCTTGAATACGGC TERM 2942 2692010 - 2692023 + T 100 -9.5 -4.68545 | opp_overlap 2692005 2692003 2692010, overlap 2692005 2692003 TTATCCAATAGAAAA GCGCC TGAT GGCGC TTTTCTATCTTGAAT TERM 2943 2692023 - 2692010 - T 100 -9.5 -4.68724 | opp_overlap 2692010 2692005 2692003, overlap 2692005 2692003 TTATCCAATAGAAAA GCGCC TGAT GGCGC TTTTCTATCTTGAAT vacJ 2692858 - 2692082 - | VacJ lipoprotein TERM 2944 2692872 - 2692889 + r 78 -5.6 -4.88895 | ATGAAAGTCTGTCTA TCCCTT TCACTT AAGGGA TTTGTTTATTTATTT nrfG2 2694108 - 2692882 - | putative cytochrome c-type biogenesis protein ccmH 2694620 - 2694108 - | putative cytochrome c-type biogenesis protein ccmG 2695183 - 2694617 - | thiol:disulfide interchange protein DsbE ccmF 2697150 - 2695180 - | putative cytochrome c-type biogenesis protein TERM 2945 2696133 - 2696151 + g 74 -8.1 -4.09685 | gap 1 CTTCATGCTGAGTCC GGCTGCGC ACCT GCGC-GCC TTTTACCGCATACAG ccmE 2697641 - 2697147 - | cytochrome c-type biogenesis protein CcmE ccmD 2697940 - 2697638 - | putative heme exporter protein D TERM 2946 2697898 - 2697887 - G 76 -5.8 -4.61868 | overlap 2697889 GAGCCAGACATAAAA GGCA TAGT TGCC CATGGCAAAAAATTC ccmC2 2698674 - 2697937 - | putative heme exporter protein C ccmB 2699423 - 2698737 - | heme exporter protein B ccmA3 2700022 - 2699366 - | cytochrome c biogenesis protein CcmA TERM 2947 2699993 - 2699979 - GR 73 -5.6 -4.42464 | overlap 2699981 AACTGCTGAAATAAA CAGCGA TCA TCGCGG ATACAGGTCAGATTT YP_2431 2700934 - 2700467 - | hypothetical protein TERM 2948 2701222 - 2701236 + H 74 -7.8 -3.91364 | opp_overlap 2701222 2701219 TCGAACCAGTAACTA GCCCTT AGG AGGGGC TTGTTATATCCGTTT lemA 2701550 - 2702092 + | hypothetical protein TERM 2949 2704222 - 2704245 + F 90 -2.4 -5.94214 | gap 1 GGTATCAGTTCGATG TGT-CCGTCAC TCG GTGTTGGGACA TTTTTTTATTCTATT TERM 2950 2704443 - 2704427 - f 75 -2.3 -5.38326 | TTAATTAAATAAAAA GTGTA AAATGCA TACAC ATCAATACAGTAACC phnA 2704510 - 2704851 + | hypothetical protein TERM 2951 2704861 - 2704889 + T 78 -8.9 -3.83921 | opp_overlap 2704860 2704861 AGCTAATGCATTAAT GGGTTCTTTGC CACCCAA GCAGAGAGCCC TTCTATTATCTTGGA TERM 2952 2705251 - 2705230 - T 84 -10.1 -3.74693 | TGCCACCGTATTAAA GGTGATCGC TCAG GCGGTCACC GAACTCGATAATAAA YP_2436 2706433 - 2705225 - | transposase for the IS285 insertion element YP_2437 2707100 - 2706621 - | hypothetical protein TERM 2953 2707074 - 2707085 + g 89 -2.2 -5.80951 | overlap 2707076 ACGCTCTAACAACGC CGGT AAAA ACTG TTTTTTCTTTTCCAT YP_2438 2708019 - 2707213 - | hypothetical protein YP_2439 2708886 - 2708059 - | hypothetical protein YP_2440 2709146 - 2708886 - | hypothetical protein TERM 2954 2709191 - 2709225 + r 89 -11.4 -3.44377 | opp_overlap 2709189 2709187 2709185 2709183, overlap 2709190 GAAAAATCAGAGACC GCATGCTCTACGTGTG TTT CCCACGCAGAACATGC TTACCTTTTATCTAT vgrG2 2711578 - 2709245 - | hypothetical protein TERM 2955 2709290 - 2709300 + g 74 -8.2 -4.07133 | overlap 2709285 2709293 TGTTCGCGTCGGTTC CGGC GGT GCCG TTGTTTCTGGCGGTG TERM 2956 2710015 - 2710002 - G 70 -8.1 -3.65351 | TTATTTTTAGTCAAA CGCGA CATA TCGCG CTCGGCCTGTTCCCA icmF2 2715450 - 2711872 - | hypothetical protein TERM 2957 2712092 - 2712106 + g 72 -10 -3.36492 | opp_overlap 2712090 CGAAAAAGAATATCG GGCATC GCG GATGCC TTCTGGCGTTGGGCC TERM 2958 2712571 - 2712582 + g 70 -4.4 -4.69559 | AATCGCTTTGGACGT GTGA GTAA TCAC TTTATTTTCAAATTT TERM 2959 2712900 - 2712927 + g 79 -5.6 -5.05782 | overlap 2712906 CTTTAATCAGTTTAT TTTCACGAAACG CGAT CGTTTCTTGTAA TTTTTTAGCCTGGCT TERM 2960 2713935 - 2713970 + g 71 -7 -4.14739 | gap 1, opp_overlap 2713946 GTAACTGCTGTGTCG CGTTCAATAACGCAGGT AAG ATCTGC-TCATTGGACG TTTTGGCATAACTCA TERM 2961 2715299 - 2715313 + g 73 -6.4 -4.58663 | opp_overlap 2715299 TGCTTAATGAAGTTA TCCAGT AAC GCTGGA TTTTTCGCCAATGCT TERM 2962 2715500 - 2715490 - R 77 -8.2 -4.05446 | overlap 2715491 GGCGGCAATGACAAA GCGC GGT GCGC CGTACCAAAAACCTA TERM 2963 2715589 - 2715563 - R 74 -9.4 -3.28791 | ATTCTGGCTTCATAA CTTTCGAGAGGC CGC GCCTCACCAAAG CCGAGGAAAGGCCCC dnaC_19 2717342 - 2716560 - | transposase/IS protein TERM 2964 2717258 - 2717272 + g 77 -11.4 -3.3506 | overlap 2717271 CTGCCTGTTGTGACA GCGCAG GCG CTGCGC TTATAAGGCTTTCCA YP_2445 2718361 - 2717339 - | transposase for insertion sequence IS100 TERM 2965 2718383 - 2718365 - R 100 -13.2 -4.01078 | AAAAGTGACCATAAA CTCTCCTG AAT CAGGAGAG CAGATTACCCCCTGG TERM 2966 2719215 - 2719196 - R 91 -7.2 -5.28176 | overlap 2719203 2719209 2719212 GGTAGGGATAAAAAA CAGATACC CGAA AGTATCTG TCAGACTGCTGACAA TERM 2967 2719304 - 2719278 - R 84 -10.1 -3.82218 | gap 1, opp_overlap 2719287, overlap 2719279 2719294 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 2968 2719305 - 2719279 - R 72 -10.1 -2.88849 | gap 1, opp_overlap 2719287, overlap 2719278 2719294 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT proX 2720419 - 2719415 - | glycine betaine transporter periplasmic subunit TERM 2969 2719617 - 2719630 + g 80 -2.3 -5.4505 | overlap 2719604 TTGGCGGCTGCCGGA TTGGC TTCA GCCCA TTTTTTGTTCGCCAC proW3 2721633 - 2720467 - | glycine betaine transporter membrane protein proV2 2722942 - 2721626 - | glycine betaine/L-proline transport ATP-binding protein TERM 2970 2721894 - 2721905 + g 71 -5.8 -4.30576 | opp_overlap 2721894 CGTTCCAGCACATAA CCGT AATC ACGG TTTTCATCCTGAAGC TERM 2971 2723419 - 2723435 + r 80 -3.5 -5.37043 | GGCTAACTGCCTATT GGGGCTG AGT CTCCCCC TTTTTTATCTAGAAT nrdF 2724472 - 2723501 - | ribonucleotide-diphosphate reductase subunit beta nrdE 2726765 - 2724615 - | ribonucleotide-diphosphate reductase subunit alpha TERM 2972 2725326 - 2725313 - G 81 -5.9 -5.03314 | CCGAGCCGTAAAAAA GACGC TCCC GCGCC AGATAACCGTGCAGG nrdI 2727193 - 2726747 - | ribonucleotide reductase stimulatory protein nrdH 2727401 - 2727165 - | putative glutaredoxin TERM 2973 2728235 - 2728210 - g 90 -9 -4.63527 | gap 1, overlap 2728211 2728212 GCATCAGTTCAAAAA GC-GCCCGTGC AAAAA GCACAGGCAGC GAAAAAGCACCATAA asr2 2727922 - 2728287 + | acid shock protein precursor TERM 2974 2728327 - 2728346 + F 100 -9.3 -5.63504 | opp_overlap 2728329 CAGGTTAATCCCAAT CACCCAC TTAATT GTGGGTG TTTTTTTATAAGCTT YP_2455 2728765 - 2729100 + | hypothetical protein TERM 2975 2729361 - 2729340 - T 84 -10.1 -3.74693 | TGCCACCGTATTAAA GGTGATCGC TCAG GCGGTCACC GAACTCGATAATAAA tnpA_3 2730459 - 2729335 - | putative transposase for IS285 element YP_2458 2730944 - 2730453 - | hypothetical protein TERM 2976 2730812 - 2730830 + g 74 -2.4 -5.10933 | opp_overlap 2730812, overlap 2730813 CCATCTCTTGCAACA TCGATTCA ATA TAAATCGG TTTTATTTTCAGTAG YP_2459 2731513 - 2731109 - | hypothetical protein cspB 2731925 - 2732167 + | cold shock protein TERM 2977 2732213 - 2732230 + F 100 -9.1 -6.25741 | opp_overlap 2732213 2732212 AAATAGATTTAGAAG CCTCGTC TTTT GACGGGG TTTTTTTTATTATTT TERM 2978 2732615 - 2732635 + F 72 -6.1 -4.35644 | opp_overlap 2732607 2732615 2732619, overlap 2732612 2732616 TAATAATCAAGCCAA TCAATAGCC TGG GGCTTTTGG TTCTTTTCTACTACT TERM 2979 2733031 - 2733042 + G 78 -2.2 -5.36441 | CCTTGGTGGCAACTG CGTT ATTG AGCG TTTTTTCTGTCCCAG TERM 2980 2734059 - 2734046 - g 90 -8.1 -5.05601 | CACCAGAGAGAAAAA TGGCC TACC GGCCA AGATAACGCTTTGGT oppA4 2732988 - 2734565 + | putative solute-binding protein dppB3 2734565 - 2735533 + | hypothetical protein TERM 2981 2735954 - 2735967 + G 70 -8.1 -3.69605 | TAGCATTAACCCACT GGCCA AAGC TGGCC TTGATTTTACGTGCC dppC3 2735530 - 2736336 + | binding-protein-dependent transport protein dppD2 2736336 - 2737142 + | putative transport ATPase oppF3 2737096 - 2737800 + | putative transport ATPase ureA 2738999 - 2739301 + | urease subunit gamma ureB 2739312 - 2739788 + | urease subunit beta TERM 2982 2740492 - 2740504 + G 71 -10.5 -3.14211 | opp_overlap 2740490, overlap 2740500 GAAAGGTAATTCATA CGGGC GCG GCCCG TTGCTGGAACAGGCT ureC 2739878 - 2741596 + | urease subunit alpha ureE 2741883 - 2742587 + | urease accessory protein UreE ureF 2742609 - 2743295 + | urease accessory protein ureG 2743422 - 2744084 + | urease accessory protein TERM 2983 2744473 - 2744453 - f 74 -6.2 -4.431 | overlap 2744467 CAGTCAGCCACAAAA GTTCACAT GATGA ATGCGAAC TACGCCTCGCAGATC TERM 2984 2745110 - 2745131 + F 84 -10.1 -3.86346 | opp_overlap 2745111 2745113, overlap 2745111 2745113 GTCAGTCTATTGAAT AGAGGCTGG GTAC CCAGCCTCG TTTATCAGCCAGTGA TERM 2985 2745130 - 2745111 - f 100 -13.6 -3.09327 | opp_overlap 2745110 2745111 2745113, overlap 2745113 TCAGTCTATTGAATA GAGGCTGG GTAC CCAGCCTC GTTTATCAGCCAGTG TERM 2986 2745111 - 2745130 + F 100 -13.6 -2.91593 | opp_overlap 2745111 2745113, overlap 2745110 2745113 TCAGTCTATTGAATA GAGGCTGG GTAC CCAGCCTC GTTTATCAGCCAGTG TERM 2987 2745128 - 2745113 - f 77 -10.4 -3.10522 | opp_overlap 2745111 2745110 2745113, overlap 2745111 AGTCTATTGAATAGA GGCTGG GTAC CCAGCC TCGTTTATCAGCCAG TERM 2988 2745113 - 2745128 + F 76 -10.4 -3.00946 | opp_overlap 2745113 2745111, overlap 2745111 2745110 AGTCTATTGAATAGA GGCTGG GTAC CCAGCC TCGTTTATCAGCCAG TERM 2989 2745349 - 2745373 + G 70 -4.3 -4.72986 | opp_overlap 2745352 2745355 TCAGGTAATGTTTCA GAATAACCC ATTGACC GGGCTATTC TTTTTCATCGCAATA YP_2473 2745239 - 2746231 + | putative urea transporter TERM 2990 2746339 - 2746307 - f 73 -10 -2.93853 | gap 1, overlap 2746304 ATAGACCTCAAATTA TTGGCGTTATCG-TG TTGT CAGCGATAACGCCAG GTCAGAACGGGTAGG hoxN 2746356 - 2747438 + | putative nickel transport protein TERM 2991 2747559 - 2747518 - T 91 -10.3 -4.20918 | opp_overlap 2747522, overlap 2747520 2747522 GGGAAGGCTAACAAA TAGAGACACTCATTAACCG ATAA CGCTTAATGAGTGTCTTTT TTTTACAGGTTACAT TERM 2992 2747557 - 2747520 - T 100 -12.9 -3.70139 | opp_overlap 2747522, overlap 2747518 2747522 GAAGGCTAACAAATA GAGACACTCATTAACCG ATAA CGCTTAATGAGTGTCTT TTTTTTACAGGTTAC TERM 2993 2747555 - 2747522 - T 100 -15.5 -3.4214 | opp_overlap 2747522, overlap 2747520 2747518 AGGCTAACAAATAGA GACACTCATTAACCG ATAA CGCTTAATGAGTGTC TTTTTTTTACAGGTT TERM 2994 2747522 - 2747555 + T 100 -15.5 -5.77853 | opp_overlap 2747522 2747520 2747518 AGGCTAACAAATAGA GACACTCATTAACCG ATAA CGCTTAATGAGTGTC TTTTTTTTACAGGTT hdeB 2747936 - 2747607 - | acid-resistance protein TERM 2995 2749453 - 2749437 - g 71 -6.5 -4.13767 | overlap 2749440 GTTGCCACGCTAAAA TTAGCCG GTG CGGCGAA GGCAAAATATATTAT kch 2748549 - 2749724 + | voltage-gated potassium channel TERM 2996 2749785 - 2749764 - T 75 -7.3 -4.34402 | opp_overlap 2749764 GTGTTTATATCAAAA CACCCTC GGTTAAGT GAGGGTG TTTTTTTTGTCACGA TERM 2997 2749764 - 2749785 + T 100 -8 -5.93809 | opp_overlap 2749764 GTGTTTATATCAAAA CACCCTCG GTTAAG TGAGGGTG TTTTTTTTGTCACGA ccrB 2750226 - 2749822 - | camphor resistance protein CrcB ccrB 2750622 - 2750242 - | camphor resistance protein CrcB TERM 2998 2750335 - 2750353 + g 73 -11 -2.92668 | overlap 2750330 TGCTCTGCCTCGGGC TGTGGCCA GTT TGGCCGCA TCTAATTGCATACTG YP_2479 2750890 - 2750711 - | hypothetical protein celA 2751633 - 2751980 + | N,N'-diacetylchitobiose-specific PTS system transporter subunit IIB celB 2751991 - 2753352 + | N,N'-diacetylchitobiose-specific PTS system transporter subunit IIC celC 2753519 - 2753866 + | N,N'-diacetylchitobiose-specific PTS system transporter subunit IIA TERM 2999 2754231 - 2754261 + G 86 -6.8 -4.98061 | overlap 2754234 TGTCTCGGCCTATTG TGGCCTCTCAGGCG TAT CGCTTAAGAGGTGA TTTTCTTTCCTATAT TERM 3000 2754234 - 2754258 + G 75 -10.7 -3.34291 | overlap 2754231 CTCGGCCTATTGTGG CCTCTCAGGCG TAT CGCTTAAGAGG TGATTTTCTTTCCTA celD 2753903 - 2754745 + | DNA-binding transcriptional regulator ChbR TERM 3001 2755532 - 2755543 + G 72 -3.6 -4.8143 | GCGCAACGTGGTTAT CGGC TGGG GTCG TTTTTAGATTGTTAA YP_2484 2754797 - 2755558 + | hypothetical protein YP_2485 2755741 - 2755565 - | hypothetical protein TERM 3002 2755807 - 2755778 - R 100 -15.9 -2.91065 | opp_overlap 2755783, overlap 2755769 2755780 2755783 ATCATAGACATCACA GATAATGCCCCCA TTTT TAGGGGCATTATC CTACAAGAGGCGACT TERM 3003 2755805 - 2755780 - R 93 -12.7 -3.00259 | opp_overlap 2755783, overlap 2755769 2755778 2755783 CATAGACATCACAGA TAATGCCCCCA TTTT TAGGGGCATTA TCCTACAAGAGGCGA TERM 3004 2755802 - 2755783 - R 80 -10 -3.63762 | opp_overlap 2755783, overlap 2755769 2755780 2755778 AGACATCACAGATAA TGCCCCCA TTTT TAGGGGCA TTATCCTACAAGAGG YP_2486 2756221 - 2755853 - | hypothetical protein TERM 3005 2756956 - 2756967 + G 74 -7.2 -4.27467 | opp_overlap 2756952 GCAGAACAGAGTAGG GCGG TTAA CCGC TTTATGTTGGTATTA seqA 2756716 - 2757243 + | replication initiation regulator SeqA pgm 2757274 - 2758959 + | phosphoglucomutase TERM 3006 2759037 - 2759014 - f 86 -11.8 -3.16564 | gap 1, opp_overlap 2759014 TTGGCACTCGATCAA TCCGGC-ACAG GCT CTGTTGCCGGA TTTTTTATGTGTTTT TERM 3007 2759014 - 2759037 + F 100 -11.8 -5.53079 | gap 1, opp_overlap 2759014 TTGGCACTCGATCAA TCCGGC-ACAG GCT CTGTTGCCGGA TTTTTTATGTGTTTT YP_2489 2759333 - 2759575 + | hypothetical protein TERM 3008 2759638 - 2759621 - T 100 -11.3 -4.8622 | opp_overlap 2759614 2759624 TGGCGCAATTAAAAA TGACCGC TCAG GCGGTCA TCTAAGATTAATTTA YP_2490 2760131 - 2759703 - | hypothetical protein kdpE 2760855 - 2760226 - | DNA-binding transcriptional activator KdpE TERM 3009 2761123 - 2761133 + r 82 -6.8 -4.77567 | overlap 2761120 CTTCGTTATTCTGTC TGCC GCG GGCA TTTTGTTATCAACCT kdpD1 2763874 - 2761148 - | sensor protein KdpD TERM 3010 2761253 - 2761239 - G 78 -3.5 -5.08255 | opp_overlap 2761246, overlap 2761244 AGTGGCAAAACAAAA CGGAA GCTGG CTCCG CCCTCTTGACGCTTC TERM 3011 2762335 - 2762361 + g 76 -8 -4.15565 | opp_overlap 2762355 TTTCATACAGATGTC TGGCCCGTTGTT CCC GATAACGGGCAA TTTTAGCCTGATAGC TERM 3012 2762525 - 2762498 - G 70 -9.8 -3.2657 | overlap 2762493 2762512 AAAAAACAGATCGAA GCTGGCGACATT AATC ACCGCCGCCAGC ACTGAAGGCCAGCGG kdpC 2764534 - 2763884 - | potassium-transporting ATPase subunit C TERM 3013 2764359 - 2764375 + g 79 -12.3 -3.25942 | TTATCGCCCAGTCGC GCCAGTG AAC CACTGGC TTGCTGTGAAAACAT TERM 3014 2764564 - 2764591 + r 71 -9.8 -2.72855 | opp_overlap 2764564 2764563, overlap 2764566 TTTGTGTCTTAAAAC CGGCCACCGCAT CAGG GTGCGATGGCTG TGGTTAAACGGTTTA kdpB 2766764 - 2764698 - | potassium-transporting ATPase subunit B TERM 3015 2765287 - 2765325 + g 70 -9.5 -3.30441 | gap 1, opp_overlap 2765285, overlap 2765288 GCCAGAAAATCATCT ACGCC-AGCTTCAGCGGC AATT GCCGCTGCGGTTAGGCGA TTGTCACCGGTGATC TERM 3016 2765288 - 2765324 + g 76 -13 -2.5805 | gap 1, opp_overlap 2765285, overlap 2765287 CCAGAAAATCATCTA CGCC-AGCTTCAGCGGC AATT GCCGCTGCGGTTAGGCG ATTGTCACCGGTGAT TERM 3017 2766011 - 2765977 - G 83 -9.2 -4.40298 | opp_overlap 2765977, overlap 2765978 AGGCAAACCAATAAA GCGACTAGCACGGTGA TGG TCACCGGGCTACCGGC TTGGCTGGCCTCCAC TERM 3018 2766009 - 2765978 - G 73 -10.2 -3.23094 | gap 1, opp_overlap 2765977, overlap 2765977 GGCAAACCAATAAAG CGACTAGCACGGTGA TGG TCACCGGGCTA-CCG GCTTGGCTGGCCTCC kdpA 2768546 - 2766858 - | potassium-transporting ATPase subunit A TERM 3019 2767637 - 2767625 - G 70 -10.5 -2.93447 | overlap 2767624 CTAACGGGGATAAAT GCGGG TTT CCCGC CAGTTCGGCGTACAT TERM 3020 2767788 - 2767772 - G 70 -2.2 -4.92783 | AAGGGATCAGAAAAA TGGCCA GCATT TGGACA AAATTACTGAATGCA TERM 3021 2768488 - 2768472 - G 82 -7.9 -4.60924 | CAAACGTGCTAAAAA CCCACCC AAC GGACGGG ACAACACGAACAACA TERM 3022 2768815 - 2768835 + H 71 -6.9 -4.12225 | opp_overlap 2768814 2768817 TTGGTTTGTGAAACT TACTTTCAC CGG GTGAATGTA TTTGGTTTGCTAATT TERM 3023 2769203 - 2769189 - g 72 -3.5 -4.84359 | GTATCTGGATAAAAA CCAGT GATAA ACCGG TTTGGCTGACCCAAT YP_2496 2768963 - 2769247 + | hypothetical protein TERM 3024 2769299 - 2769323 + F 100 -12.1 -5.16237 | TACAAAAAATAGCTG GCCCGTGAGTA TCA TGCCCACGGGC TTTTTTAATGCGCTT YP_2497 2769425 - 2769670 + | hypothetical protein YP_2498 2769652 - 2770068 + | hypothetical protein TERM 3025 2770483 - 2770497 + G 72 -3.5 -4.77165 | TTTTGTCAGCAACAG CAGGT CGATA GCCTG TTTTATTCTCAACAG TERM 3026 2770809 - 2770841 + G 74 -4 -4.91109 | opp_overlap 2770818, overlap 2770810 2770818 CCAGTTATTTCCTGC AGGGGAAGACGCTG CCTTA CAGCGTTTACGCCG TTTTTGTCGTGAACA phrB 2770198 - 2771661 + | deoxyribodipyrimidine photolyase YP_2500 2771652 - 2772689 + | hypothetical protein YP_2501 2772829 - 2773575 + | putative hydrolase-oxidase TERM 3027 2773597 - 2773617 + F 100 -13.3 -2.9518 | overlap 2773613 GGATAGGGCTATTTT CGCCGATGT TTA GCATCGGCG TGTCTCCGTCTTACA dUR1 2774844 - 2775794 + | hypothetical protein YP_2504 2775752 - 2776528 + | hypothetical protein TERM 3028 2777205 - 2777231 + G 74 -7.3 -4.15841 | gap 1, overlap 2777208 CGGAACCATTGCATA TCGCGCTGTGGG GGAT CCCA-ACCGCGA TTTGTGCTTTCCTGA YP_2505 2776613 - 2777344 + | hypothetical protein YP_2506 2777341 - 2778360 + | hypothetical protein pcp1 2778370 - 2779017 + | pyrrolidone-carboxylate peptidase TERM 3029 2779056 - 2779029 - T 82 -10.6 -3.62597 | gap 1 CTGATCTTCCAATAA CCTCACGGCAGCC GAA GG-TGGCGTGAGG TTACAGACAACGTCC ung 2779818 - 2779108 - | uracil-DNA glycosylase TERM 3030 2780033 - 2780020 - H 73 -3.9 -5.0133 | overlap 2780024 GATGTGGTGAAAAAA TTGAT TTGA ATCAA AGAATGGTAGGGGCT YP_2509 2780147 - 2780530 + | autonomous glycyl radical cofactor GrcA TERM 3031 2780579 - 2780594 + F 100 -10.4 -5.1675 | opp_overlap 2780577 AATCATAAAGTGATA GGGGAC TTCG GTCCCC TTTTTTCATGCCTGA yplA 2780709 - 2781671 + | phospholipase A yplB 2781749 - 2782405 + | putative phospholipase A accessory protein TERM 3032 2782515 - 2782498 - T 74 -4.8 -4.78237 | opp_overlap 2782493, overlap 2782493 2782485 TATCTGACAACAAAA CCGCTA TGTGAG CAGCGG CTTTGTTGTCGTGCA srmB2 2783861 - 2782536 - | ATP-dependent RNA helicase SrmB TERM 3033 2783627 - 2783642 + g 79 -5.4 -5.00616 | gap 1 GCGTCAGGATCAGGA TCCGCGG TGG CC-CGGA TTTTTTGCGGGGGAA smtA7 2784101 - 2784859 + | hypothetical protein TERM 3034 2784934 - 2784911 - T 83 -8.9 -4.08958 | gap 1, opp_overlap 2784910 AGCGTGAAATAAGAA TC-GGGCGTC GTAGA GACGCCCTGA GGTTATTGACAAAGT TERM 3035 2785009 - 2785035 + T 72 -10.1 -2.88849 | gap 1, overlap 2785004 2785010 ACATCTATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCTCTGCC TERM 3036 2785010 - 2785036 + T 84 -10.1 -3.82218 | gap 1, overlap 2785004 2785009 CATCTATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCTCTGCCT TERM 3037 2785096 - 2785120 + T 79 -11.4 -2.56539 | overlap 2785095 2785093 GGTTTGTCAGCAGTC TGCGGGCGTC GTAGA GACGCCCTCA ATCTTATGGATTCAG nadB 2786779 - 2785142 - | L-aspartate oxidase TERM 3038 2785359 - 2785369 + g 76 -6.8 -4.46212 | ATGCGCCGTAAAGCC CGCT CTA AGCG TTTTGTGGTACGGAC TERM 3039 2786617 - 2786607 - G 70 -2.4 -4.91109 | overlap 2786609 CCCTGAGCATAAAAA GTGG CTC CCTC ATTAAGAGGCCCTTT rpoE 2786967 - 2787542 + | RNA polymerase sigma factor RpoE rseA 2787568 - 2788224 + | anti-RNA polymerase sigma factor SigE TERM 3040 2788313 - 2788280 - g 86 -13.3 -3.59979 | gap 1, opp_overlap 2788282 CCTGTTCATGGCAAA CATTGCT-TCGGCGGA ATC TACGCCGATAGCAATG TTGCAGGAAATGGGC rseB 2788224 - 2789180 + | periplasmic negative regulator of sigmaE TERM 3041 2789556 - 2789546 - g 71 -6.8 -4.26076 | TTACTGGCACGAAAA CTGG CAA CCAG AATTGAGGGGCTCAG rseC 2789177 - 2789632 + | SoxR reducing system protein RseC YP_2519 2790543 - 2789653 - | hypothetical protein TERM 3042 2790439 - 2790457 + g 70 -4.4 -4.64383 | opp_overlap 2790428, overlap 2790440 TATAGCTATTATTGT AGCAAGGG TAA CCCATGCA TTTTCATTTCTCATT TERM 3043 2790527 - 2790547 + g 70 -8.3 -3.80733 | CTCTCCTCGTTACCG CCAAGAGAA TAT TTCACTTGG TTATTATAAAATCAC TERM 3044 2791011 - 2790998 - H 73 -3.9 -5.01497 | ACGACTAGAGAAAAA TTCAT ATAA ATGAA GCACATAAGAAACTT lepA 2791007 - 2792806 + | GTP-binding protein LepA lepB 2792816 - 2793814 + | lsignal peptidase I rnc 2794166 - 2794846 + | ribonuclease III era 2794843 - 2795754 + | GTP-binding protein Era TERM 3045 2795905 - 2795918 + G 76 -8.1 -4.12599 | opp_overlap 2795905 CGTTCCAATTTAAAA GGCTG CTTG CAGCC TTTTACGCCGTTATT TERM 3046 2795918 - 2795905 - g 76 -8.1 -4.27316 | opp_overlap 2795905 CGTTCCAATTTAAAA GGCTG CTTG CAGCC TTTTACGCCGTTATT recO 2795764 - 2796489 + | DNA repair protein RecO pdxJ 2796648 - 2797379 + | pyridoxal phosphate biosynthetic protein PdxJ acpS 2797379 - 2797759 + | 4'-phosphopantetheinyl transferase TERM 3047 2797788 - 2797812 + F 78 -5.8 -4.82901 | gap 1, opp_overlap 2797788 TAGCCGAAAATTTAA GGGATGGGTAT GGAA ATGC-CATCCC TTTTTGTGCCCAGAA TERM 3048 2797848 - 2797830 - f 100 -16 -4.36914 | opp_overlap 2797830 TTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC TERM 3049 2797830 - 2797848 + F 100 -16 -3.07307 | opp_overlap 2797830 TTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC tnp_26 2797910 - 2798419 + | transposase for the IS1541 insertion element TERM 3050 2798497 - 2798521 + T 88 -9.9 -4.21974 | opp_overlap 2798500, overlap 2798499 2798500 ATAGGCGCATATGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTGCATACTGG TERM 3051 2798499 - 2798519 + T 100 -12.5 -3.70709 | opp_overlap 2798500, overlap 2798497 2798500 AGGCGCATATGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTGCATACT TERM 3052 2798518 - 2798500 - T 100 -16 -4.8048 | opp_overlap 2798499 2798497 2798500 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTGCATAC TERM 3053 2798500 - 2798518 + T 100 -16 -2.81702 | opp_overlap 2798500, overlap 2798499 2798497 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTGCATAC napF1 2798835 - 2798575 - | ferredoxin 2 TERM 3054 2799499 - 2799517 + H 100 -13.2 -4.01078 | CCAGGGGGTAATCTG CTCTCCTG ATT CAGGAGAG TTTATGGTCACTTTT YP_2530 2799521 - 2800543 + | transposase for insertion sequence IS100 TERM 3055 2800624 - 2800610 - g 77 -11.4 -3.3506 | overlap 2800601 TGGAAAGCCTTATAA GCGCAG CGC CTGCGC TGTCACAACAGGCAG dnaC_20 2800540 - 2801322 + | transposase/IS protein murQ 2802003 - 2802890 + | N-acetylmuramic acid-6-phosphate etherase serB2 2803165 - 2803812 + | hypothetical protein YP_2534 2803922 - 2804485 + | tRNA-specific adenosine deaminase TERM 3056 2804501 - 2804531 + T 79 -11 -3.18912 | overlap 2804502 CGGTGGCCAGGTGAT GCGCCGCCCAGCAT GTT ATGACGGGCGGCGG TTGGTGACTAAATCA TERM 3057 2804502 - 2804530 + T 100 -14.5 -2.51133 | overlap 2804501 GGTGGCCAGGTGATG CGCCGCCCAGCAT GTT ATGACGGGCGGCG GTTGGTGACTAAATC mltE2 2806054 - 2804594 - | putative transglycosylase TERM 3058 2804658 - 2804674 + g 100 -6.5 -5.69068 | overlap 2804646 AGCTCCGCCTCAATG GCGGC ATGTTGA GCCGC TTTTTTCTCTTTTTC TERM 3059 2807659 - 2807648 - g 76 -5.8 -4.60487 | overlap 2807656 GATCATGTGCAAAAA GGTG AAAT CACC GTGGGGGCCAAATTG TERM 3060 2808356 - 2808315 - g 73 -2.9 -5.0538 | gap 1, opp_overlap 2808341 CGGTAGCGGAAAAAA CCTTCCTGATCACCAT-CGG CGA CCGCACGGTAACCGGTATGG TCACCCGTGATCAGA TERM 3061 2809317 - 2809304 - g 72 -8.1 -3.95073 | opp_overlap 2809304 2809303, overlap 2809308 GTGTACAGCGAGAAA CGCAG CACT CTGCG CTTGTGGTGGGCAGA purL 2806370 - 2810260 + | phosphoribosylformylglycinamidine synthase TERM 3062 2810372 - 2810398 + T 72 -10.1 -2.88849 | gap 1, opp_overlap 2810361, overlap 2810367 2810373 ACATCCATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCTCTGCC TERM 3063 2810373 - 2810399 + T 84 -10.1 -3.82218 | gap 1, opp_overlap 2810361, overlap 2810367 2810372 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCTCTGCCT TERM 3064 2810460 - 2810482 + T 90 -11.4 -3.60597 | overlap 2810458 2810463 GTTTGTCAGCAGTCT GAAGGGTATT GAA GATACCCTTC TCTTTATCAATTTAT TERM 3065 2810463 - 2810479 + T 72 -7.3 -3.91369 | overlap 2810460 2810458 TGTCAGCAGTCTGAA GGGTATT GAA GATACCC TTCTCTTTATCAATT TERM 3066 2810596 - 2810624 + T 70 -2.6 -4.98352 | gap 1, overlap 2810602 TCCCTTGTTGCCTTT CTGTA-ACTCAAA TTAT TTTGGGTATATAG TTTATTTTATTTAAT YP_2537 2811250 - 2810672 - | hypothetical protein TERM 3067 2811290 - 2811304 + r 73 -8.6 -3.68222 | ATAACCGTTGTCATC CAAGTC ACT GACTTG TTGTTGACCTTAAAA YP_2538 2812181 - 2811573 - | hypothetical protein TERM 3068 2813001 - 2813034 + H 80 -9.8 -3.617 | gap 2, opp_overlap 2812998, overlap 2812996 2813001 2813007 GGCATCCACATATTC TTG--CAACGGGGCAA TTTA TTGCCCCGTTGATCAA TGTTTAGTTGTCTAT TERM 3069 2813007 - 2813026 + H 100 -13.6 -3.23638 | opp_overlap 2812998, overlap 2813001 2813001 2812996 CACATATTCTTGCAA CGGGGCAA TTTA TTGCCCCG TTGATCAATGTTTAG TERM 3070 2813209 - 2813188 - g 100 -8.1 -5.43866 | gap 1, opp_overlap 2813188 CAACCTTTAAAAAAA GCACTTTGCT CGC AGCAA-GTGC TTTTTTTGTGCCCAG TERM 3071 2813188 - 2813209 + G 100 -8.1 -5.60993 | gap 1, opp_overlap 2813188 CAACCTTTAAAAAAA GCACTTTGCT CGC AGCAA-GTGC TTTTTTTGTGCCCAG TERM 3072 2813229 - 2813247 + G 93 -16 -3.07307 | opp_overlap 2813229 TTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC TERM 3073 2813247 - 2813229 - g 100 -16 -4.36914 | opp_overlap 2813229 TTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC YP_2539 2813146 - 2813370 + | hypothetical protein tnp_27 2813360 - 2813818 + | transposase for the IS1541 insertion element TERM 3074 2813892 - 2813924 + F 100 -11.3 -5.00196 | opp_overlap 2813899, overlap 2813898 2813899 CCTTATAGGCGCATA TGAAAAACCTCCGGC TAT GCCGGAGGATATTTA TTTTGTTATTTCAAC TERM 3075 2813898 - 2813918 + F 100 -12.5 -4.06214 | opp_overlap 2813899, overlap 2813892 2813899 AGGCGCATATGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTTTGTTAT TERM 3076 2813917 - 2813899 - f 100 -16 -4.8048 | opp_overlap 2813898 2813892 2813899 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTTGTTA TERM 3077 2813899 - 2813917 + F 100 -16 -3.01288 | opp_overlap 2813899, overlap 2813898 2813892 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTTGTTA baeS5 2814024 - 2815475 + | two-component system sensor kinase TERM 3078 2815565 - 2815581 + GF 89 -7.3 -5.00884 | CGTGAAACAGACCGG TCTCTCT GGC AGAGGGA TTTTTTGGGGAGCGT YP_2542 2815479 - 2816546 + | hypothetical protein TERM 3079 2817493 - 2817504 + GF 74 -7.2 -4.19371 | CGGGAGTCGGCTAAG CGGC ATAA GCCG TTTGTTCGCAGTTTC atoC2 2816509 - 2817846 + | two-component system response regulator nadE 2818006 - 2819628 + | NAD synthetase glnB 2819643 - 2819981 + | nitrogen regulatory protein P-II 1 TERM 3080 2820020 - 2820045 + T 91 -6.2 -5.50499 | gap 1, opp_overlap 2820020 GCTGAATAACAAAAG CCCGT-TCGTT GCCAA AACGATGCGGG TTTTTTTACATATAA TERM 3081 2821477 - 2821450 - T 80 -9.9 -3.695 | overlap 2821451 TTGAAATAGCCGAAA TGCTGATCAGG TACCTT CCTGATCAGCG GCATTAAGTGCGTAG TERM 3082 2821476 - 2821451 - T 93 -13.4 -2.81218 | overlap 2821450 TGAAATAGCCGAAAT GCTGATCAGG TACCTT CCTGATCAGC GGCATTAAGTGCGTA hmp2 2822704 - 2821514 - | nitric oxide dioxygenase TERM 3083 2822859 - 2822847 - H 80 -6.3 -4.87626 | overlap 2822840 GCTGAAGATGAAAAA TTCAC ATA GTGAA TATGAGGATAATTCT glyA 2823245 - 2824498 + | serine hydroxymethyltransferase TERM 3084 2824512 - 2824533 + F 95 -11.5 -3.86202 | AAGGCGGCTGTCACC GTCCTGGCC TCCT GGCCGGGGC TTTGATCTCATCGGG YP_2549 2824611 - 2824832 + | hypothetical protein ail2 2824942 - 2825490 + | attachment invasion locus protein TERM 3085 2825527 - 2825511 - f 72 -6.5 -4.3534 | opp_overlap 2825512, overlap 2825512 TCCTAACCATGAAAA CCCACCA TAA TGGTGGT TTCAAATTGCTGACA TERM 3086 2825526 - 2825512 - f 74 -10 -3.20722 | opp_overlap 2825512, overlap 2825511 CCTAACCATGAAAAC CCACCA TAA TGGTGG TTTCAAATTGCTGAC TERM 3087 2825512 - 2825526 + F 80 -10 -3.67976 | opp_overlap 2825512 2825511 CCTAACCATGAAAAC CCACCA TAA TGGTGG TTTCAAATTGCTGAC hcaT 2825842 - 2826999 + | putative 3-phenylpropionic acid transporter YP_2552 2828357 - 2826996 - | stationary phase inducible protein CsiE TERM 3088 2827085 - 2827058 - G 79 -12.8 -3.03781 | opp_overlap 2827059, overlap 2827053 TTAACGGAAATGATA TCTGAATCAGCG GCGG CGCTGATTCAGT TGATTGCAAAACATA TERM 3089 2827059 - 2827084 + g 100 -16.3 -3.33815 | opp_overlap 2827058 2827053 TAACGGAAATGATAT CTGAATCAGCG GCGG CGCTGATTCAG TTGATTGCAAAACAT TERM 3090 2828781 - 2828795 + G 72 -10 -3.36073 | overlap 2828780 GAAGTGATGGCTAAT GTGCTG GGG CAGCAC TATTTCACCGATATA YP_2553 2828499 - 2829173 + | hypothetical protein YP_2554 2829164 - 2830186 + | hypothetical protein TERM 3091 2830254 - 2830231 - T 100 -8.9 -5.7946 | gap 1, opp_overlap 2830231 TTCCCAATAAAAAAA GCCAGTC-GG CTAAC CCTGACTGGC TTTTTATCTGAAACG TERM 3092 2830231 - 2830254 + T 100 -10.3 -4.96848 | opp_overlap 2830231 TTCCCAATAAAAAAA GCCAGTCGG CTAACC CTGACTGGC TTTTTATCTGAAACG suhB 2831088 - 2830285 - | inositol monophosphatase TERM 3093 2831323 - 2831286 - g 87 -9.5 -4.29738 | gap 1, opp_overlap 2831290 2831292 2831321 CCAGAGCCATGAAAA CAATGGGATTAACCAA TCTATAT TTGGTTAATCC-ATTG GTAAAACCAGATTCT lasT 2831207 - 2831980 + | SpoU family rRNA methylase YP_2557 2832073 - 2832630 + | DNA-binding transcriptional regulator IscR nifS_2 2832684 - 2833913 + | cysteine desulfurase nifU 2833944 - 2834330 + | scaffold protein iscA 2834600 - 2834923 + | iron-sulfur cluster assembly protein YP_2561 2834889 - 2835080 + | hypothetical protein hscB 2835034 - 2835558 + | co-chaperone HscB TERM 3094 2837567 - 2837588 + G 86 -13.7 -3.61398 | opp_overlap 2837564 TGAGCAAGAAAGTGC CGCGATCGC CCAA GCGGTCGCG TTATTACAGCAGCAG TERM 3095 2837676 - 2837707 + G 91 -15.2 -3.56568 | ACGCAAGATTTTGCC GCACGCCGGATGGA CGCT TCCATTCGCCGTGC TTTAGCGGGTCATTC hscA 2835801 - 2837738 + | chaperone protein HscA fdx2 2837741 - 2838076 + | adrenodoxin family ferredoxin YP_2565 2838106 - 2838306 + | hypothetical protein TERM 3096 2838317 - 2838332 + F 100 -8.2 -5.49234 | AGTGAATACTGACTG GGTCGC GCAA GCGGCC TTTTTTATTGCGTAT TERM 3097 2839354 - 2839333 - g 71 -6.5 -4.25104 | opp_overlap 2839323 TGCCTCCGAGCAAAA TGCGCCGTT GATT ATCGACGCA GCCACCTTAACCGGC pepB 2838446 - 2839744 + | aminopeptidase B TERM 3098 2839766 - 2839792 + F 78 -10.1 -3.42459 | opp_overlap 2839755 2839770, overlap 2839759 2839770 TGAATTGAGAAGACT CAAAGGGGCGC ATTTG GCGTCCCTTCG TTCATCTTCTCGATG TERM 3099 2839770 - 2839788 + F 76 -9.5 -3.4684 | opp_overlap 2839770, overlap 2839766 2839759 TTGAGAAGACTCAAA GGGGCGC ATTTG GCGTCCC TTCGTTCATCTTCTC TERM 3100 2839788 - 2839770 - f 70 -7.3 -3.79071 | opp_overlap 2839766 2839759 2839770 TTGAGAAGACTCAAA GGGGCGC ATTTG GCGTCCC TTCGTTCATCTTCTC TERM 3101 2840096 - 2840118 + G 70 -8.5 -3.7398 | gap 1, overlap 2840095 GATGGCGAAATGAGT TTCACCACCG CTAA CGG-GGTGAA TATTTTGCATTGGGA TERM 3102 2840384 - 2840362 - g 86 -13.4 -3.61715 | GATGCTGTTGAAGAA CGGCGGGTTG GTG CAACCCGCTG AAATGGTGGTAGACA sseB 2839823 - 2840776 + | enhanced serine sensitivity protein SseB TERM 3103 2840814 - 2840795 - f 79 -10.7 -3.11281 | overlap 2840793 2840791 GTATCTAAAAGGATA GGGAGCC AATAGA GGCTCCC AGACTGCTGACAAAC TERM 3104 2840901 - 2840875 - f 84 -10.1 -3.82218 | gap 1, opp_overlap 2840884, overlap 2840876 2840891 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 3105 2840902 - 2840876 - f 72 -10.1 -2.88849 | gap 1, opp_overlap 2840884, overlap 2840875 2840891 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT TERM 3106 2840980 - 2840999 + F 81 -10.7 -3.32997 | TTGTCAATAACCTCA GGGAGCC AATAGA GGCTCCC TTCCATTTCTGCCAC TERM 3107 2845128 - 2845149 + G 77 -10.1 -3.74693 | TTTATTATCGAGTTC GGTGACCGC CTGA GCGATCACC TTTAATACGGTGGCA YP_2569 2843946 - 2845154 + | transposase for the IS285 insertion element TERM 3108 2845689 - 2845702 + T 72 -8.1 -3.78312 | CAGTTCAAAGGCTCC CGGTG TGAC CACCG TTTCATAAATAATTT ecpD2 2847633 - 2846854 - | putative pili chaperone protein TERM 3109 2847661 - 2847710 + r 73 -10.1 -2.98493 | gap 1, opp_overlap 2847664 2847668, overlap 2847658 2847664 GCAGACTTATCTTTA TAACAGACTTGCTACCGCAGCG TTTTATC CGCCTCGGCAGCAAG-CTGTTA TGCTTTACTGCTGCG TERM 3110 2847707 - 2847664 - R 89 -11.8 -3.31461 | gap 1, opp_overlap 2847661 2847658 2847664, overlap 2847668 GACTTATCTTTATAA CAGACTTGCTACCGCAGCG TTTTATC CGCCTCGGCAGCAAG-CTG TTATGCTTTACTGCT TERM 3111 2847704 - 2847668 - R 93 -12.3 -3.17622 | opp_overlap 2847664 2847661 2847658, overlap 2847664 TATCTTTATAACAGA CTTGCTACCGCAGCG TTTTATC CGCCTCGGCAGCAAG CTGTTATGCTTTACT fimA4 2848326 - 2847772 - | frimbrial protein TERM 3112 2848361 - 2848392 + r 84 -3.8 -5.52096 | opp_overlap 2848361 GATTTATTAAATATA TAGTTAATATTCGC TCAT GCCAATACTAGCTA TTTTTTATTGCCTTT clpA3 2851268 - 2848518 - | Clp ATPase TERM 3113 2849780 - 2849792 + g 70 -9.1 -3.54424 | overlap 2849786 2849789 TCAACTGCTCAGTAC GCGCA TCC TGCGC TTTACCAAAGTGCCG YP_2574 2851976 - 2853856 + | hypothetical protein TERM 3114 2854045 - 2854000 - g 74 -7.5 -4.26076 | gap 1 CCAGCGCCAGGAAAA GCGC-CCTTGCCTGAACAGGAA GCC TTCCGCATCGGGCAAAGTGCGC ACATGACGTTCTCTC YP_2575 2853856 - 2854881 + | hypothetical protein TERM 3115 2855727 - 2855707 - g 70 -9.7 -3.29511 | TTGATGCCGCGATAA CCCCGATAG CGC CTATCGTGG TGCCGATCCCAGAAG YP_2576 2854980 - 2856161 + | hypothetical protein TERM 3116 2856375 - 2856363 - g 76 -5.5 -4.85599 | CCTATCCTAGAAAAA GTGGC ACA ACCAC AAGGTTTGGCAGTAA TERM 3117 2856499 - 2856481 - g 70 -9.6 -3.23853 | overlap 2856479 TTTTTGCAACGAATA TCGATGGC ATT GCCATCAA ACCTGCATGGAATAA YP_2577 2856168 - 2857199 + | putative fimbrial protein TERM 3118 2858249 - 2858236 - f 85 -2.4 -5.75342 | opp_overlap 2858236 GCGGGTGAAAAAAAA GTGA GTTTCT TCAC TGATCTTCCCACATC TERM 3119 2858319 - 2858309 - f 95 -5.4 -5.7946 | GTGTGAATAAAAAAA CACT AAA AGTG GAAAAGAAAGAGGTG mukB2 2858523 - 2859275 + | hypothetical protein TERM 3120 2859367 - 2859381 + G 76 -7.2 -4.34912 | opp_overlap 2859366 ATTTTAAGGGAAATG CGTTAT GGA ATAACG TTATTTTCATTACTT TERM 3121 2860163 - 2860145 - g 85 -3.8 -5.40072 | overlap 2860147 CTGGCTGGAAAAAAA GTTTGGCA TCA TACCAAGC TTAGCCTCAACCTTG ompA3 2859276 - 2860958 + | hypothetical protein YP_2581 2860955 - 2861437 + | hypothetical protein TERM 3122 2861451 - 2861488 + T 83 -12.2 -2.73994 | opp_overlap 2861454, overlap 2861448 AATTTTTGAGCGATA TCACGTCATGCTAAAT AACCCG ACTTAGCATGACGTGG TCGTATTGGAAGAAT TERM 3123 2861485 - 2861454 - T 88 -12.5 -2.64616 | opp_overlap 2861451 2861448 TTTTGAGCGATATCA CGTCATGCTAAAT AACCCG ACTTAGCATGACG TGGTCGTATTGGAAG citB3 2862397 - 2861795 - | LuxR family regulatory protein TERM 3124 2863663 - 2863635 - R 100 -11.7 -4.65078 | opp_overlap 2863635 ATATCGTTAAGAAAA GAGGGCGGCATAA CCC TAATGCAGCCCTC TTTTTCATGCTATTG TERM 3125 2863635 - 2863663 + r 100 -11.7 -4.8083 | opp_overlap 2863635 ATATCGTTAAGAAAA GAGGGCGGCATAA CCC TAATGCAGCCCTC TTTTTCATGCTATTG mltB2 2864785 - 2863673 - | membrane-bound lytic murein transglycosylase B; catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N-acetylglucosamine in peptidoglycan TERM 3126 2864675 - 2864658 - G 80 -3.3 -5.26875 | opp_overlap 2864660, overlap 2864659 2864660 GGCTCAAGCAAAAAA CCGCCCT GAAC AGGGCTA TCTGACGGGGTTGCA TERM 3127 2865598 - 2865561 - g 79 -11.3 -3.54543 | gap 1, overlap 2865551 2865573 ATGGACCTGGCGAAA CCAGAGTGGAAAGGCCGC TGG GCAGC-TTCCCCCTCCGG TGCTGACTTCCAGGC sfuA 2865096 - 2866115 + | iron(III)-binding periplasmic protein TERM 3128 2866128 - 2866142 + F 71 -8.5 -3.53091 | TAATCCGTTTTACTC CGCCC CCTGC GGGCG TTTAACAAACCGAGT TERM 3129 2866519 - 2866529 + G 74 -6.8 -4.386 | GCAATAGCACCACTG GCAG TAC CTGC TTTTGTACAAAGTTA TERM 3130 2866577 - 2866591 + G 73 -3.4 -4.99035 | overlap 2866578 TCCCCTCAATGAATG GGCTGG CCG CCGGCG TTTTTATCTCGGTGA TERM 3131 2866890 - 2866905 + G 72 -8.2 -3.90464 | CGCCGCTAACATGCT GGCGGG AGTA CTCGCC TTATGTTGTTTGGGG TERM 3132 2867538 - 2867550 + G 70 -9.1 -3.50737 | overlap 2867534 TGCTCCCGGCGCCGC TGCGG GTG CCGCA TTAGTCTTTCTGGCT sfuB 2866156 - 2867757 + | iron(III)-transport system permease yfuC 2867754 - 2868803 + | iron(III)-transport ATP-binding protein YP_2587 2869400 - 2868876 - | hypothetical protein TERM 3133 2869688 - 2869663 - H 79 -10.7 -3.00986 | overlap 2869660 AACCACATTAAATTA TGTTTTGTTTT AAAA AAAACAAAACA CTCACCATTATAATT hcp5 2869861 - 2870346 + | hemolysin-coregulated protein (uncharacterized) TERM 3134 2870355 - 2870374 + T 85 -9.3 -4.11346 | GTATTAATTTATTCG GGGATGG CCTACA CCATCCC TTATTATTTACGTGT YP_2589 2871424 - 2870576 - | hypothetical protein TERM 3135 2873648 - 2873638 - g 86 -3.2 -5.63012 | AAAAATAAAGAAAAA CTGG ATA CCAA TATTAAGTTTCTCTG TERM 3136 2873724 - 2873748 + G 74 -4.3 -4.75288 | TAAAACCAATACTAT TTTGCAAGATG AGT CATTGTGCGAA TTTATTTTGGTCTGG dmsA2 2872219 - 2874681 + | putative dimethyl sulfoxide reductase chain A protein dmsB2 2874693 - 2875310 + | putative dimethyl sulfoxide reductase chain B protein dmsC2 2875255 - 2876088 + | anaerobic dimethyl sulfoxide reductase subunit B TERM 3137 2876124 - 2876143 + F 77 -6.4 -4.60487 | overlap 2876127 TTCCATGTGGTGATT TACCCGCT GATT AGCGGCTA TTTTTGCGGCTAATC torD3 2876492 - 2877166 + | hypothetical protein napF2 2877163 - 2877732 + | putative iron-sulphur protein TERM 3138 2877770 - 2877783 + T 71 -6.7 -4.13767 | ACTGCACCTTATTCA GTTGG GTAT CCAAC TTTTGGGGTGCAGCC YP_2595 2878634 - 2877978 - | putative lipoprotein TERM 3139 2878373 - 2878383 + g 73 -3.2 -4.93288 | overlap 2878382 TAATATCACCCGCGT TGGT CAT GCCA TTTTGTTTAAATGTT nrfG3 2879032 - 2878631 - | TPR repeat-containing protein csgG 2879748 - 2879014 - | putative lipoprotein YP_2598 2880266 - 2880706 + | hypothetical protein cybB3 2881400 - 2880801 - | putative cytochrome avtA1 2882767 - 2881532 - | aminotransferase TERM 3140 2882227 - 2882196 - G 100 -7.4 -5.40474 | gap 1, opp_overlap 2882201 ACTCGCTCAAAAAAA TCCAACTCAACA-CA TTG CGCTGTTGGGTTGGA TGGAAAACCGAGGAT TERM 3141 2882326 - 2882301 - G 87 -4.7 -5.40474 | AGCTCGCCAAAAAAA TCAATGCCTTC GGTC AACGGCACTGA ACGCACTTGCGCACC TERM 3142 2882812 - 2882830 + H 70 -7.4 -3.88787 | overlap 2882814 2882829 ACCGTCCGAGCGACG CTGACCAT CAG ATGGTCTG TTTATGAACATATCC TERM 3143 2882814 - 2882828 + H 71 -8.6 -3.53174 | overlap 2882812 CGTCCGAGCGACGCT GACCAT CAG ATGGTC TGTTTATGAACATAT TERM 3144 2883277 - 2883267 - g 73 -3.2 -4.91429 | AAAGCGCAAATAAAA CAAC GCG GCTG TTGTGCCATTCTCGG TERM 3145 2883559 - 2883533 - g 70 -9.4 -3.59293 | opp_overlap 2883533, overlap 2883529 GCAAACCGAAAGCAA CGGTAAGCAACA TTT TGATGCTAACCG TGTCGTCACCTATGC TERM 3146 2884248 - 2884238 - g 70 -3.2 -4.77438 | AGCCACCATCAAAAA CCTC ACT GAGA TAGGTAAACAGCAGT YP_2601 2883033 - 2884280 + | hypothetical protein TERM 3147 2884296 - 2884326 + T 84 -9.8 -3.78934 | opp_overlap 2884298 CCTTCTTCCGCATCA TATCTGCCGGAA CTTATCC TCCCGGCAGATA TTCTTCTGCGCCCAC TERM 3148 2884324 - 2884298 - T 75 -10.2 -2.78384 | opp_overlap 2884296 TTCTTCCGCATCATA TCTGCCGGAA CTTATCC TCCCGGCAGA TATTCTTCTGCGCCC glk 2885329 - 2884358 - | glucokinase TERM 3149 2884805 - 2884819 + g 71 -7.8 -3.98981 | opp_overlap 2884804 CTCCTGGCGCAATAC GGCCAG AAT CTGGTC TTCTTCTTCACTATT putP3 2886037 - 2885510 - | hypothetical protein TERM 3150 2886911 - 2886900 - g 100 -7.2 -5.40072 | overlap 2886902 TTTGGTCGAAAAAAA GCCC ACCG GGGC CTGCTGGCTATTGGC lysR15 2886089 - 2886967 + | LysR family transcriptional regulator tas3 2887103 - 2888092 + | putative ion channel protein YP_2606 2888308 - 2888676 + | hypothetical protein TERM 3151 2888712 - 2888702 - T 71 -6.8 -4.16016 | opp_overlap 2888703 TCATCGCTCAATAAA GCCT GTC AGGC GGGTTTTCATGGAAT mntH 2889998 - 2888769 - | manganese transport protein MntH TERM 3152 2889230 - 2889220 - G 82 -8.2 -4.56914 | overlap 2889221 CCATTGAAATGAAAA GCCG CAG CGGC GGTTGCCATCATCGC TERM 3153 2890083 - 2890097 + H 90 -5.8 -5.5112 | ATCAAGCGCATTTGT GATAAT GGA ATTATC TTTTTTGTTAGTAGA nupC1 2890449 - 2891633 + | nucleoside permease TERM 3154 2891659 - 2891672 + F 84 -3.7 -5.4492 | opp_overlap 2891659 ACGATCGCTTAACGA GGCGC TACG GCACC TTTTTTGTATCTATA gltX 2892867 - 2894282 + | glutamyl-tRNA synthetase TERM 3155 2894307 - 2894325 + F 100 -12.4 -5.5762 | TTTTCCGTGTTATCA GGCGGCCA CTC TGGTCGCC TTTTTTATATTTGAT TERM 3156 2894595 - 2894623 + F 100 -14.7 -3.16068 | opp_overlap 2894600 2894602, overlap 2894602 AGCTCCACCACCCTT TAAAAGACCGGCC TTT GGCCGGTTTTTTG CTTTTCAGTTCCGAC TERM 3157 2894618 - 2894600 - f 91 -10.2 -4.10161 | opp_overlap 2894595 2894602, overlap 2894602 CACCACCCTTTAAAA GACCGGCC TTT GGCCGGTT TTTTGCTTTTCAGTT TERM 3158 2894616 - 2894602 - f 100 -12.8 -3.64716 | opp_overlap 2894595 2894602, overlap 2894600 CCACCCTTTAAAAGA CCGGCC TTT GGCCGG TTTTTTGCTTTTCAG TERM 3159 2894602 - 2894616 + F 100 -12.8 -5.46698 | opp_overlap 2894602 2894600, overlap 2894595 CCACCCTTTAAAAGA CCGGCC TTT GGCCGG TTTTTTGCTTTTCAG TERM 3160 2894882 - 2894893 + G 73 -5.8 -4.44245 | opp_overlap 2894873, overlap 2894880 2894879 ATTAAACCAGTGGTG CCTG GCGG CAGG TTTTGTCCGTAATCT YP_2610 2894778 - 2895389 + | hypothetical protein YP_2611 2895612 - 2895451 - | hypothetical protein TERM 3161 2895709 - 2895698 - g 70 -2.2 -5.03945 | GAAGAATTACAAAAA CAGC AGCA ACTG ATTGAGACCCAAATT YP_2612 2895674 - 2895868 + | hypothetical protein YP_2613 2896211 - 2895969 - | hypothetical protein ligA 2898216 - 2896204 - | NAD-dependent DNA ligase LigA TERM 3162 2897432 - 2897414 - G 70 -2.4 -4.91511 | opp_overlap 2897427 ATTTGACGATAAAAA GCAATAAC CTG ATCACTGC CAGTGCAGAGTTTCA TERM 3163 2897724 - 2897697 - G 70 -3.2 -4.82901 | CTTGTGGCATAAAAA CCTCGCCACGGA CTTC TACGCGCCGCGG GACATTATCCCCATG TERM 3164 2898256 - 2898240 - R 100 -10.8 -5.5762 | opp_overlap 2898235 ACCAAAGATAAAAAA CCCCCG GCATG CGGGGG TTCGGGTTAATTCGA zipA 2899332 - 2898307 - | cell division protein ZipA TERM 3165 2898807 - 2898819 + g 70 -4.8 -4.59773 | overlap 2898797 GCTGTTGTGGAGCCA CCTG ATGTG CAGG TTTTTCCACATGCGG cysZ 2899542 - 2900276 + | putative sulfate transport protein CysZ TERM 3166 2900288 - 2900306 + F 100 -14.6 -3.97139 | ATGATCATTTTCGGT GGGCGTGT CTA ACACGCCC TTGTTATTGGGATTA TERM 3167 2900642 - 2900624 - g 84 -13.2 -3.41073 | overlap 2900622 GACCGCAGGCAAAGA GCTGGTTG AAC CAACCAGC GGGAATACAGGTGTT cysK2 2900433 - 2901401 + | cysteine synthase A TERM 3168 2901456 - 2901421 - f 100 -16.4 -3.74693 | opp_overlap 2901431 2901436, overlap 2901431 GGCTACCGCACTAAA TGCAAAAAAAGCACCC TTTG GGGTGCTTTTTTTGTA GAGTACATCAAAGTT TERM 3169 2901431 - 2901446 + F 100 -10.4 -5.626 | opp_overlap 2901421 2901431, overlap 2901436 CTAAATGCAAAAAAA GCACCC TTTG GGGTGC TTTTTTTGTAGAGTA TERM 3170 2901446 - 2901431 - f 100 -10.4 -5.58209 | opp_overlap 2901431 2901436, overlap 2901421 CTAAATGCAAAAAAA GCACCC TTTG GGGTGC TTTTTTTGTAGAGTA ptsH 2901900 - 2902157 + | phosphohistidinoprotein-hexose phosphotransferase component of PTS system (Hpr) TERM 3171 2903272 - 2903261 - g 81 -5.8 -5.00196 | GCCGAAAGAAGAAAA CCCA TTCC TGGG CTGGCGTGCTATTCG TERM 3172 2903533 - 2903554 + G 70 -10.3 -3.01712 | opp_overlap 2903538, overlap 2903538 TCGCTCGCCATTTAG CTAAAGAAG TTGA CTTCTTTAG TATTGGGACAAACGA ptsI 2902206 - 2903933 + | phosphoenolpyruvate-protein phosphotransferase TERM 3173 2904064 - 2904030 - g 82 -3.5 -5.34555 | opp_overlap 2904032 TCAGATGATAAAAAA GACAGCAGTGTTATT GAGAT AGTTGCACCGCTGTC TGGTGAAATCGTCAA crr 2903982 - 2904491 + | glucose-specific PTS system component TERM 3174 2904556 - 2904532 - T 93 -9.9 -4.34488 | opp_overlap 2904535, overlap 2904534 2904535 GATACCGATAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCATATGCGCCTAT TERM 3175 2904554 - 2904534 - T 100 -12.5 -3.76888 | opp_overlap 2904535, overlap 2904532 2904535 TACCGATAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 3176 2904553 - 2904535 - T 100 -16 -2.8541 | opp_overlap 2904535, overlap 2904534 2904532 ACCGATAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 3177 2904535 - 2904553 + T 100 -16 -4.8048 | opp_overlap 2904534 2904532 2904535 ACCGATAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC tnp_28 2905143 - 2904634 - | transposase for the IS1541 insertion element TERM 3178 2905205 - 2905223 + r 100 -16 -4.36914 | opp_overlap 2905205 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 3179 2905223 - 2905205 - R 100 -16 -3.07307 | opp_overlap 2905205 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 3180 2905260 - 2905243 - R 100 -9.8 -5.60993 | opp_overlap 2905243 CTGGGCACAAAAAAA CGGCGC TCAAGG GCGCCG TTTTGCTGCCGGCCA TERM 3181 2905243 - 2905260 + r 100 -10.5 -4.25104 | opp_overlap 2905243 CTGGGCACAAAAAAA CGGCGCT CAAG GGCGCCG TTTTGCTGCCGGCCA baeS6 2906711 - 2905362 - | putative two-component system sensor kinase TERM 3182 2906428 - 2906474 + g 100 -10.3 -5.27923 | opp_overlap 2906428 2906463 2906465, overlap 2906430 GAGAGAGCCGATATA TCTTTTTCTGCCGTATCTGCC ATCTC GGCAGGTAAGACAGAAAAATA TTTTTTGTCCGCTTC TERM 3183 2906474 - 2906428 - G 73 -11 -2.91239 | opp_overlap 2906428 2906430, overlap 2906463 2906465 GAGAGAGCCGATATA TCTTTTTCTGCCGTATCTGCCA TCT CGGCAGGTAAGACAGAAAAATA TTTTTTGTCCGCTTC TERM 3184 2906430 - 2906472 + g 100 -12.9 -4.26475 | opp_overlap 2906428 2906463 2906465, overlap 2906428 GAGAGCCGATATATC TTTTTCTGCCGTATCTGCC ATCTC GGCAGGTAAGACAGAAAAA TATTTTTTGTCCGCT cpxR2 2907420 - 2906737 - | putative two-component system response regulator TERM 3185 2907178 - 2907212 + g 83 -2.7 -5.41746 | CCGATCAATATTGTC GCCTTTAGCCGTTAA CATAA TGATCGGCAAACGGC TTTTTTTACGCACTT acrA7 2907608 - 2908813 + | HlyD family secretion protein YP_2625 2908817 - 2910853 + | putative ABC transporter, ATP-binding protein TERM 3186 2910897 - 2910910 + T 86 -6.7 -4.9645 | GCTTTCATCGTGATA GGTCA TCCG TGACC TTTTATTGTTATCAT TERM 3187 2911075 - 2911088 + T 74 -4.5 -4.83615 | AACGCGAATTATTTT GGGTA TAGA TGCCC TTTTTATACAAAATA hcaD 2912754 - 2911108 - | putative pyridine nucleotide-disulphide oxidoreductase TERM 3188 2911854 - 2911826 - G 71 -11 -2.81584 | gap 1, opp_overlap 2911844, overlap 2911825 ATATCAGCCAATAAT CT-GCCTTGCCGG TTAG CCGGCCAGGCCAG TGGAATATACGTTGC putP4 2914274 - 2912814 - | putative permease TERM 3189 2913378 - 2913361 - G 71 -5.5 -4.45117 | opp_overlap 2913362, overlap 2913362 GATATTTCAAATAAA GCCAGGT CAAC ATCTGGC CCGGTTAAGTCAGGG TERM 3190 2914088 - 2914056 - G 70 -9.1 -3.50393 | overlap 2914058 GGTGAGCGTATATAA TATGGCTGGGCCTTT TCC ATAAGCCCAGCCACT GCCCCCCAAGAATGT TERM 3191 2914086 - 2914058 - G 83 -13.9 -3.32698 | overlap 2914056 TGAGCGTATATAATA TGGCTGGGCCTTT TCC ATAAGCCCAGCCA CTGCCCCCCAAGAAT YP_2628 2914468 - 2914271 - | hypothetical protein malY 2917090 - 2915864 - | putative aminotransferase YP_2631 2917642 - 2919171 + | hypothetical protein TERM 3192 2919256 - 2919282 + F 72 -10.1 -2.88849 | gap 1, opp_overlap 2919245, overlap 2919251 2919257 ACATCCATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCTCTGCC TERM 3193 2919257 - 2919283 + F 84 -10.1 -3.82218 | gap 1, opp_overlap 2919245, overlap 2919251 2919256 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCTCTGCCT TERM 3194 2919361 - 2919386 + F 93 -11.9 -3.66378 | overlap 2919362 ATAAAAGTTCATTTA TGCTGAGTCAG TACG CTGGCTCAGCG TTTACATGGAATATG TERM 3195 2919362 - 2919385 + F 91 -13.2 -2.79505 | overlap 2919361 TAAAAGTTCATTTAT GCTGAGTCAG TACG CTGGCTCAGC GTTTACATGGAATAT baeS7 2919404 - 2920948 + | putative two-component sensor histidine kinase ompR2 2920945 - 2921652 + | putative response regulator YP_2634 2923265 - 2922033 - | hypothetical protein cysM 2924388 - 2923510 - | cysteine synthase B cysA 2925650 - 2924559 - | sulfate/thiosulfate transporter subunit TERM 3196 2924969 - 2924959 - G 74 -2.4 -5.10163 | AATTCCAAAACAAAA CGGG TTG CCGG TTCACGCCAGACTTC cysW 2926515 - 2925640 - | sulfate/thiosulfate transporter permease subunit TERM 3197 2926284 - 2926272 - G 70 -4.8 -4.63527 | GCACCACCCCAAAAA CCAG GTTCA CTGG CACGGTTATCAATGC cysT 2927348 - 2926515 - | sulfate/thiosulfate transporter subunit TERM 3198 2926614 - 2926572 - G 91 -12.6 -3.96618 | GTTAATGCTAAACAA CAGCGCCAGTGACACGGCCA GAA TCACCGAGGCAATGGCGCTG GCTGCCGGGTAATCA cysP 2928385 - 2927348 - | thiosulfate transporter subunit TERM 3199 2928652 - 2928631 - R 100 -12.3 -6.32017 | gap 1 AACAAATAAAAAAAA GCCCGGT-CG TCG CGCACCGGGC AAGAAAAACAGTTTA nanT 2930232 - 2928700 - | putative sialic acid transporter TERM 3200 2930029 - 2930013 - G 74 -8 -3.99405 | TGAAGGCAGCAGAAA TCAGGC TGGTC GCCTGA ATCAGTGTCAGGCCA TERM 3201 2930417 - 2930405 - R 76 -7.7 -4.23615 | opp_overlap 2930405 2930404 ATGACATTCAATAAA GGAGT AAA ACTCC ATTTGAGTGTATAAG rpiR5 2931715 - 2930837 - | rpiR family transcriptional regulatory protein TERM 3202 2931293 - 2931277 - G 72 -3.7 -4.88228 | overlap 2931279 2931283 2931284 AGCCAACACCAAAAA TACAGAT GCG ATCCGCA GGGCGCAGCACTTTG YP_2642 2931864 - 2931712 - | hypothetical protein TERM 3203 2931852 - 2931839 - G 100 -9.5 -5.85737 | AGATCAATAAAAAAA CCCGG AAAA CCGGG TAAAAAGGTCAAAAA ebgC3 2932374 - 2931904 - | hypothetical protein nagC7 2933328 - 2932456 - | N-acetylmannosamine kinase TERM 3204 2933745 - 2933719 - g 72 -3.6 -4.89521 | opp_overlap 2933719, overlap 2933720 AGAGTGGAAAGAAAA TGCAGTTCCC GGAGAAG GGGAACAGCG TGGTATTGCCGTAGA YP_2645 2933597 - 2934724 + | hypothetical protein nanE 2934930 - 2935631 + | N-acetylmannosamine-6-phosphate 2-epimerase dapA1 2935688 - 2936587 + | N-acetylneuraminate lyase TERM 3205 2936647 - 2936625 - T 100 -13.5 -4.18044 | TGATAAATAATGAAA GGCCGGATT TCATC AATCCGGCC AACGGTGATATATTT YP_2648 2937632 - 2936685 - | hypothetical protein TERM 3206 2936731 - 2936741 + g 70 -8.2 -3.72576 | GCAAAATAATAGCTG CCGG TAA CCGG TTTGCTAAAACGCAG TERM 3207 2937673 - 2937650 - R 74 -6.8 -4.39386 | CTGAAACGATTAAAA TTACCTTGCG ACAA CGCAAAATAA AGCGGGAAGAGAGAG TERM 3208 2937731 - 2937715 - R 76 -9.4 -3.4758 | TAGGAATAATATTAA GGCGCT GAGGT AGCGCC CAAGTGATAATAGCA YP_2649 2938373 - 2937762 - | hypothetical protein YP_2650 2938732 - 2939145 + | hypothetical protein TERM 3209 2941331 - 2941343 + G 75 -9.1 -3.96216 | ATAGTTATAGCTTGG GTGCC TAC GGCAC TTATTTCGATAACAG YP_2651 2939632 - 2941911 + | putative autotransporter TERM 3210 2941929 - 2941956 + T 100 -14.2 -5.53991 | opp_overlap 2941928 AACATACCAGATGAG TGGTTTCCCGCG ATAA TGCGGGAGACCA TTTTTTTGCTCAATA YP_2652 2942419 - 2942003 - | hypothetical protein YP_2653 2942525 - 2942710 + | hypothetical protein rimI2 2943317 - 2942892 - | putative acetyltransferase TERM 3211 2944041 - 2944023 - g 70 -8.9 -3.61715 | TACGGCTTTGAAGAA GATGCCA TTCAT TGGCATC AGGTAGCGCATAGCC TERM 3212 2944134 - 2944160 + G 73 -2.8 -5.04385 | overlap 2944133 TATATTAAACATCGC CAGGAAGCCCGT GGT ATTGGCGGCCTG TTTTTTGACGATCTG TERM 3213 2944456 - 2944436 - g 77 -9.7 -3.65812 | GCGCTGGGAATATAA CTATCAGCC AGA GGCAGATAG TGCAGAAGCCGCGTT hemF 2943600 - 2944529 + | coproporphyrinogen III oxidase TERM 3214 2944745 - 2944732 - g 91 -5.3 -5.40072 | GCGGGTGGAAAAAAA TGATC TGGT GATCA CCGCAGATATCCCAC YP_2656 2944529 - 2944987 + | hypothetical protein sfcA2 2947417 - 2945138 - | malic enzyme TERM 3215 2946559 - 2946591 + g 71 -7 -4.13728 | gap 1, opp_overlap 2946572, overlap 2946589 CCGGTTCCGGGTTTG CCAGGGC-CAGAATC AACG GATTCGGTGCCATGG TTTTCACCATCTCTG TERM 3216 2947319 - 2947336 + g 84 -11.3 -3.90112 | opp_overlap 2947318 2947317, overlap 2947324 CGCCAGTGCCAAATC CCGTTGG GTCG CCAACGG TTTGGTTGGCGAAAC mutT5 2948209 - 2947613 - | NTP pyrophosphohydrolase including oxidative damage repair enzyme TERM 3217 2948320 - 2948292 - R 100 -12.4 -4.77036 | opp_overlap 2948292 TGCTAGCAGTAAAAA CGCCCTGCCGAC GCAAA GTCCACAGGGCG TTAATCATCACTCTC TERM 3218 2948292 - 2948320 + r 77 -10.2 -3.22774 | opp_overlap 2948292 TGCTAGCAGTAAAAA CGCCCTGCCGAC GCAAA GTCCACAGGGCG TTAATCATCACTCTC napC 2949011 - 2948394 - | cytochrome c-type protein NapC TERM 3219 2949045 - 2949033 - R 78 -9.1 -3.76224 | CGGTTACTGACCAAA GCCAG GTG CTGGC TGGAAGCTATTACCA napB 2949488 - 2949021 - | diheme cytochrome c550 TERM 3220 2949276 - 2949308 + g 80 -2 -5.38549 | overlap 2949247 2949277 GCTATGTGGGATCAT CGG-TGGCTGGTTAAC ATA GTTCAGC-GCCATCCG TTTTTGTTGTTTAGG napA 2952063 - 2949571 - | nitrate reductase TERM 3221 2951027 - 2951042 + g 86 -5.4 -5.26918 | gap 1 TGATCTTCTGGTACA CCGCTCA TTT TG-GCGG TTTTTTCTAACGTGT napD 2952332 - 2952060 - | assembly protein for periplasmic nitrate reductase napF3 2952819 - 2952316 - | ferredoxin-type protein NapF TERM 3222 2952615 - 2952604 - G 71 -5.8 -4.38154 | overlap 2952569 ACAGGCCTGACAAAA GCTG CACT CAGC ACGTTGAAAATCTAT TERM 3223 2953118 - 2953151 + H 73 -2.6 -5.11613 | opp_overlap 2953121, overlap 2953149 TTCATTTAACGGGAA TAATTACCAAAACA AGACGA TGCTTTGATAATTA TTTTTTAGATAATCT TERM 3224 2953486 - 2953451 - H 80 -9 -3.9578 | ACATACGCTAAATAA TTCGAGTGGCAGGAAG ACAG CCCCCTGCAACTTGAA GTATGACGGGTATAG narP 2953619 - 2954281 + | nitrate/nitrite response regulator protein NarP TERM 3225 2954296 - 2954276 - T 86 -2.6 -5.79595 | opp_overlap 2954276 2954279, overlap 2954279 TTGGAAAATAAAAAA TACTGACA TCCGT TGTCACTA TTTAATGGCCGCTAA YP_2665 2954572 - 2954294 - | hypothetical protein TERM 3226 2955728 - 2955713 - g 70 -9 -3.5511 | overlap 2955711 TCCCAGCTACAAACA CCCGAA GAGT TTCGGG AAATTACGCTACGGG acrD 2954861 - 2958118 + | aminoglycoside/multidrug efflux system TERM 3227 2958178 - 2958203 + F 76 -7.6 -4.20783 | AGTCGGTTCTCCCCT GCGGCATG ACGAAAAAAC CATGCCGC TTTATTGCATCAGAT YP_2667 2958349 - 2958933 + | hypothetical protein TERM 3228 2958984 - 2959003 + F 74 -7.8 -4.01564 | overlap 2958985 2958987 CGCGCAATACTCACC CTAGGGCG TCCC CGCCCTAC TTTCTGGCTATTTTA TERM 3229 2958985 - 2959002 + F 83 -11.3 -2.99854 | overlap 2958984 2958987 GCGCAATACTCACCC TAGGGCG TCCC CGCCCTA CTTTCTGGCTATTTT TERM 3230 2958987 - 2959000 + F 71 -9.5 -3.0386 | overlap 2958985 2958984 GCAATACTCACCCTA GGGCG TCCC CGCCC TACTTTCTGGCTATT YP_2668 2959222 - 2959770 + | hypothetical protein TERM 3231 2959936 - 2959958 + T 79 -6.9 -4.58283 | opp_overlap 2959936 GCGGGTAATAAAAAA GGCAGTGCC TCTAC GGTTCTGCC TTTTTGCGAGGATTC TERM 3232 2959958 - 2959936 - T 87 -4.7 -5.4505 | opp_overlap 2959936 GCGGGTAATAAAAAA GGCAGTGCC TCTAC GGTTCTGCC TTTTTGCGAGGATTC TERM 3233 2961215 - 2961204 - T 71 -2.2 -5.10497 | AAGCCACTGAAAAAA CACA ATGA TGCG ATATTAAACGGTGAG YP_2670 2962536 - 2961439 - | ABC transporter ATP-binding protein TERM 3234 2964117 - 2964103 - R 71 -2.1 -5.1471 | ATCAGAAAAAATAAA CCTGA ACGCA TCAAG ACTCAGTACCTTTGA TERM 3235 2964347 - 2964316 - R 81 -9.4 -3.75517 | gap 1, overlap 2964317 AGCCGATAAAACCAA GGACTGCGCATGCCC ATA AGGCAAGCGCA-CCC AGATAAAGCCACTAT TERM 3236 2964347 - 2964317 - R 70 -9.6 -2.84587 | overlap 2964316 GCCGATAAAACCAAG GACTGCGCATGCCC ATA AGGCAAGCGCACCC AGATAAAGCCACTAT tbpA2 2965468 - 2964359 - | hypothetical protein TERM 3237 2964542 - 2964559 + g 71 -7.7 -4.03234 | opp_overlap 2964531 AATATCTGACTGATT GGCCAGA ATAT TTTGGCC TTTCTCTGAGAGCAG TERM 3238 2965027 - 2965043 + g 73 -5.1 -4.74706 | opp_overlap 2965029 CAACGGGTTCGTAAG TAGAGCC GTA GGCTTTG TTTTTCCATATTGCC TERM 3239 2965736 - 2965720 - H 71 -9.5 -2.96184 | overlap 2965719 2965722 CAGCAAAATCTAAAG CAGCAAA CAG TTTGCTG ATAAGCCACGGTGTG nrfG4 2965731 - 2966231 + | TPR repeat-containing protein arsC1 2966391 - 2966789 + | hypothetical protein TERM 3240 2967168 - 2967157 - g 71 -7.2 -3.96624 | opp_overlap 2967157 CACCCTGACCACAAA GGCC GCCT GGCC TTTATGATAACCTCC TERM 3241 2967157 - 2967168 + G 71 -7.2 -3.9712 | opp_overlap 2967157 CACCCTGACCACAAA GGCC GCCT GGCC TTTATGATAACCTCC dapE 2966791 - 2967918 + | succinyl-diaminopimelate desuccinylase TERM 3242 2967994 - 2968018 + G 71 -7.9 -4.08767 | gap 1 TAAGTGGCGCTCATC GCCTACAGCC ACAGGC GGCTG-AGGC TTTTCAAGCAATGCA vanY 2967915 - 2968592 + | putative carboxypeptidase YP_2677 2968618 - 2968854 + | hypothetical protein YP_2678 2971158 - 2969059 - | putative acetyltransferase TERM 3243 2969785 - 2969811 + g 73 -10.8 -3.29043 | overlap 2969786 2969788 CAGCGTTGGTGCCTG CCACTGCCCGCT ATG AGCGGCCAGTGA TTGTGCCACCAGATT TERM 3244 2969786 - 2969810 + g 81 -14.3 -2.57211 | overlap 2969785 2969788 AGCGTTGGTGCCTGC CACTGCCCGCT ATG AGCGGCCAGTG ATTGTGCCACCAGAT TERM 3245 2969788 - 2969808 + g 71 -11.1 -2.82623 | overlap 2969786 2969785 CGTTGGTGCCTGCCA CTGCCCGCT ATG AGCGGCCAG TGATTGTGCCACCAG TERM 3246 2970269 - 2970257 - G 76 -3.3 -5.16237 | overlap 2970258 AATTTCAGTAAAAAA CCACG CCC CGTGC CCTCATATCCCTGTA YP_2679 2971612 - 2971160 - | hypothetical protein YP_2680 2972572 - 2971706 - | hypothetical protein TERM 3247 2972190 - 2972177 - G 76 -5.9 -4.63218 | TGCCGGGCAATAAAA CGGCC CCAT GACCG ACTGACCGGTACCAC purC 2973504 - 2972791 - | phosphoribosylaminoimidazole-succinocarboxamide synthase TERM 3248 2973574 - 2973550 - R 100 -9.9 -4.49556 | opp_overlap 2973553, overlap 2973552 2973553 TCGTCATGAAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCATATGCGCCTAT TERM 3249 2973572 - 2973552 - R 100 -12.5 -3.85603 | opp_overlap 2973553, overlap 2973550 2973553 GTCATGAAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 3250 2973571 - 2973553 - R 100 -16 -2.90639 | opp_overlap 2973553, overlap 2973552 2973550 TCATGAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 3251 2973553 - 2973571 + r 100 -16 -4.8048 | opp_overlap 2973553 2973552 2973550 TCATGAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC tnp_29 2974161 - 2973652 - | transposase for the IS1541 insertion element TERM 3252 2974223 - 2974241 + r 100 -16 -4.37092 | opp_overlap 2974223 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAT TERM 3253 2974241 - 2974223 - R 100 -16 -3.07307 | opp_overlap 2974223 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAT TERM 3254 2974259 - 2974282 + r 100 -13.2 -5.18371 | opp_overlap 2974259 2974264 TTCTGGGCACAATAA CTAAAGGGGC CGAA GCCCCTTTGG TTTTATTTTATCGCG TERM 3255 2974282 - 2974259 - R 88 -11 -3.78934 | opp_overlap 2974259, overlap 2974264 TTCTGGGCACAATAA CTAAAGGGGC CGAA GCCCCTTTGG TTTTATTTTATCGCG TERM 3256 2974277 - 2974264 - R 85 -9.5 -4.11664 | opp_overlap 2974259, overlap 2974259 GGCACAATAACTAAA GGGGC CGAA GCCCC TTTGGTTTTATTTTA dapX 2975346 - 2974285 - | lipoprotein TERM 3257 2974674 - 2974707 + g 82 -10.9 -3.86822 | GCGTACCGACTTTAC GTGAGGCCTGACTGC TCTC GCTGTCAGCCCGCAC TTTATCCAAACCTTC dapA 2976260 - 2975361 - | dihydrodipicolinate synthase TERM 3258 2976342 - 2976353 + H 93 -2.2 -6.15717 | ACTGTGTTGTAAGCG CTTG GCAG CAGG TTTTTTTTATGTTTA TERM 3259 2976539 - 2976553 + G 71 -6.4 -4.36554 | CGGCTGGCTATGTTC GGTGAG GAG TTCACC TTTATTATGCTGCTG gcvR 2976407 - 2976976 + | glycine cleavage system transcriptional repressor bcp 2976976 - 2977449 + | thioredoxin-dependent thiol peroxidase TERM 3260 2977506 - 2977491 - T 100 -10.4 -4.34711 | opp_overlap 2977493 AAAATTAACGGAAAA GAGCGC TCTG GCGCTC TTGAGGTTATTGACA YP_2687 2978112 - 2977693 - | hypothetical protein YP_2688 2978811 - 2978116 - | hypothetical protein YP_2689 2979149 - 2979322 + | hypothetical protein perM3 2980475 - 2979411 - | hypothetical protein TERM 3261 2979902 - 2979889 - G 74 -9.5 -3.53091 | ACCTGCCCGGCCAAA CCGCG GTTA CGCGG CAAAACACGGCGCAC TERM 3262 2980280 - 2980259 - G 70 -8.7 -3.63897 | overlap 2980257 CAAATAGCACAAATA CGATACTGG CCGC CCAGGATCG TGAACAACCAATACG htpX2 2980713 - 2982290 + | hypothetical protein arsC2 2982295 - 2982753 + | putative oxidoreductase dnaA1 2983684 - 2982965 - | DNA replication initiation factor TERM 3263 2983782 - 2983758 - R 88 -9.9 -4.15788 | opp_overlap 2983761, overlap 2983760 2983761 AATTTGGTGAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCATATGCGCCTAT TERM 3264 2983780 - 2983760 - R 100 -12.5 -3.6761 | opp_overlap 2983761, overlap 2983758 2983761 TTTGGTGAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 3265 2983761 - 2983779 + r 100 -16 -4.8048 | opp_overlap 2983761 2983760 2983758 TTGGTGAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 3266 2983779 - 2983761 - R 100 -16 -2.80244 | opp_overlap 2983761, overlap 2983760 2983758 TTGGTGAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC tnp_30 2984369 - 2983860 - | transposase for the IS1541 insertion element TERM 3267 2984431 - 2984449 + r 100 -16 -4.36914 | opp_overlap 2984431 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 3268 2984449 - 2984431 - R 100 -16 -3.07307 | opp_overlap 2984431 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 3269 2984485 - 2984468 - R 100 -8.4 -5.24129 | opp_overlap 2984468 TCTGGGCACAAAAAA GCCGAC TTTCAC GTCGGC TATCATCGTTATTTA upp 2985120 - 2984494 - | uracil phosphoribosyltransferase purI 2985631 - 2986560 + | phosphoribosylaminoimidazole synthetase TERM 3270 2986862 - 2986874 + G 76 -7.7 -4.36262 | ATGCCAAGGCTTTTA CTGAC CGC GTCAG TTTTGATCTGGCTCT purN 2986675 - 2987313 + | phosphoribosylglycinamide formyltransferase speG 2987542 - 2988087 + | spermidine acetyltransferase TERM 3271 2988092 - 2988111 + T 88 -10 -4.20768 | AAAATGCTTAATACG TTGGGGTC AGAT GGCCCCAA TTGTTTCTTCCCCGT TERM 3272 2988648 - 2988638 - T 74 -6.8 -4.37658 | AATTGTGTCATAAAA TGCC CCA GGCA AGCCAATAACACCTT pstB1 2990438 - 2989626 - | putative phosphate transport ATP-binding protein pstA1 2992166 - 2990466 - | putative phosphate transport system permease TERM 3273 2991515 - 2991530 + g 70 -3.2 -4.77173 | TGCTGTCTAAATCTC CGGC AATTTGCA GCCG TTTCTTTTGTAACCG pstC1 2994412 - 2992163 - | putative phosphate transport system permease TERM 3274 2993454 - 2993464 + g 74 -8.2 -4.09685 | opp_overlap 2993453 GTCAAATGGAACGAT GGGC TTG GCCC TTTTCGCACATCAAA ppk 2994578 - 2996728 + | polyphosphate kinase TERM 3275 2997806 - 2997794 - g 71 -6.3 -4.37092 | overlap 2997800 ATGGTTGGCACAAAA TACCA AGC TGGTA CAGCCCCAACTGGAA ppx 2996739 - 2998298 + | exopolyphosphatase TERM 3276 2998351 - 2998315 - f 86 -8 -4.65916 | gap 1, opp_overlap 2998318, overlap 2998317 CTGACGCTAATAAAA TCG-TGCACCGGGTGGT TGTC ATCACCCGGTGCGTCAA TTGACAGCATGAGCG TERM 3277 2998318 - 2998347 + F 100 -16.5 -2.52676 | opp_overlap 2998317 2998315 ACGCTAATAAAATCG TGCACCGGGTGGT TGTC ATCACCCGGTGCG TCAATTGACAGCATG YP_2705 2998410 - 2998622 + | hypothetical protein mgtE 2998674 - 3000149 + | putative divalent cation transport protein dnaK1 3000286 - 3001641 + | putative chaperone TERM 3278 3001658 - 3001685 + T 100 -9.9 -5.09204 | overlap 3001654 CCCTATTATGTTCAC CTCTCAGTGAG TTATCT CGCACTGAGAG TTTTTGTTGGCGTAT potC2 3002776 - 3001913 - | putative ABC transporter permease potB2 3004169 - 3002823 - | putative ABC transporter permease TERM 3279 3003665 - 3003686 + gr 90 -11.6 -3.70149 | TGATTAGCGCTTCAC GTACCGGC CCTTCA GCCGGTAC TTTCCGTAGTGTCGA potD 3005163 - 3004135 - | putative transport system periplasmic protein TERM 3280 3004236 - 3004214 - GR 76 -7.6 -4.13767 | TTGTTCATGGGAAAA GCCTCAGCCA GGT TGGCTGGCGC AGTGGGTAAATTAGC goaG 3006529 - 3005216 - | 4-aminobutyrate aminotransferase TERM 3281 3005444 - 3005473 + g 70 -4.3 -4.62783 | gap 1 TCCACGCGCACGAAT GCCCACAATGGCCG CAT TGCTCATT-TGGGC TTTTTCCAGTACGTC TERM 3282 3007380 - 3007368 - g 73 -9.1 -3.67597 | GCCTGGATTGAAGAA CCCAG CTA CTGGG GGATCCGCAACGTGT TERM 3283 3007715 - 3007702 - g 76 -8.1 -4.26076 | GTACCTTCAGTAAAA CCCTG TATC CAGGG ATGCGTATCAGCTAC TERM 3284 3008088 - 3008071 - g 73 -5.5 -4.68593 | gap 1, opp_overlap 3008072 3008073, overlap 3008072 3008073 GCTATTACTTAAAAA GTCCCCCG CGA CGAGGG-C TGTTACTCGGTTATG aRO83 3006687 - 3008192 + | GntR family regulatory protein YP_2713 3008566 - 3009660 + | putitive ABC-transporter ATP-binding protein TERM 3285 3010020 - 3010009 - f 75 -2.2 -5.31877 | gap 1, overlap 3010010 AGCCACGATAAAAAA GGACG CTT CG-CC ATCATGAAATCTCAA acrA8 3010024 - 3011358 + | multidrug efflux system subunit MdtA TERM 3286 3011377 - 3011402 + G 71 -6.1 -4.30719 | gap 1, opp_overlap 3011364 3011379, overlap 3011381 3011390 AAGTGATGCCTCCAA CACCCGGTGGCG GGC CGTCAC-GGCTG TTTATTCTGCGCCCG TERM 3287 3011390 - 3011400 + G 70 -8.2 -3.75817 | overlap 3011381 3011377 AACACCCGGTGGCGG GCCG TCA CGGC TGTTTATTCTGCGCC TERM 3288 3012211 - 3012195 - g 76 -5.8 -4.67697 | overlap 3012196 GCGGAAAATAACAAA CTGGCC GCCTG GGCCAA TACTCAATCAGCAAT TERM 3289 3012979 - 3013014 + G 77 -9 -3.97042 | CGTGGCTGACCCTAA GTGTCGCGTTCAGCAC ACTG GTGCTGACGGTGATAC TTTACTTGCTGATCC acrB3 3011358 - 3014516 + | multidrug efflux system subunit MdtB acrB4 3014513 - 3017587 + | multidrug efflux system subunit MdtC TERM 3290 3018044 - 3018085 + G 100 -10.8 -4.75404 | gap 1 GCGTTTGTCACACTG CCCGGCCAG-ATTGGGCCA TTAGT TGGCCCGGCGCTGGGCGGG TTTTTAGTGGAATTT TERM 3291 3018678 - 3018697 + G 72 -8.6 -3.9461 | CAATCATGGGTTGGA CACTGCTG ATGC CAGTAGTG TTATTCTTCCAAGGC yegB 3017621 - 3019018 + | multidrug efflux system protein MdtE TERM 3292 3020053 - 3020041 - g 78 -4.1 -5.18726 | CTTCCAGAACAAAAA GATGA CCA TCACC GCCCACCTGCCTGAA baeS8 3019103 - 3020434 + | signal transduction histidine-protein kinase BaeS ompR3 3020444 - 3021163 + | DNA-binding transcriptional regulator BaeR YP_2720 3021255 - 3021638 + | hypothetical protein TERM 3293 3021698 - 3021720 + F 79 -7.7 -4.32046 | ACGACCACTTATCCC TGCGCGG GGCCATTAA CCGCGCA TTTCATTTTTGCACG YP_2721 3021913 - 3023307 + | putative protease TERM 3294 3023327 - 3023345 + F 85 -6 -5.17353 | opp_overlap 3023327 ATTCAATAAAATGAA TGCCAC AGATAAA GTGGCA TTTTTTAGTAAATAT TERM 3295 3023461 - 3023488 + F 100 -13.5 -5.43553 | AGGAACCACCTCCTT GGCTAGCCCAA TCTCCC TTGGGCTGGCC TTTTCTTTTTTCCCT TERM 3296 3024708 - 3024674 - g 74 -6.5 -4.36508 | gap 1, overlap 3024671 TGAGAAAAATAAGAA TGTTATCGACGCCACG GTAC CTTGGC-TCGATATCA CTGCACCGAACGATA bmrU 3023943 - 3024833 + | lipid kinase TERM 3297 3025057 - 3025017 - T 76 -6.7 -4.56113 | opp_overlap 3025027 3025028, overlap 3025019 AACAGAGTAAATAAA CAGCGGAGCACGGCGAGAA CCG CCCTTGTCTTGCTCCGCCA TTGGCGATTCGGGGC TERM 3298 3025055 - 3025019 - T 81 -9.3 -3.8721 | opp_overlap 3025027 3025028, overlap 3025017 CAGAGTAAATAAACA GCGGAGCACGGCGAGAA CCG CCCTTGTCTTGCTCCGC CATTGGCGATTCGGG TERM 3299 3025110 - 3025087 - T 73 -8.2 -3.61715 | CATTGTTGGCAATAA GTCATCACTC ATAA GAGTCATGAC GTGCAAAACTCAGCG YP_2723 3025629 - 3025120 - | hypothetical protein TERM 3300 3026072 - 3026061 - g 82 -7.2 -4.74518 | opp_overlap 3026063 AATTATCAAAACAAA CGCG GTAC CGCG AACGGTTTTGTCATT YP_2724 3025860 - 3026747 + | hypothetical protein TERM 3301 3026878 - 3026831 - T 79 -10.7 -3.08508 | gap 1, opp_overlap 3026838, overlap 3026828 3026835 CATTGGTGAAAATGA TGAACAGGCCCGATGCCCTG CCCCACCTC CAGGGTATCGG-CCTGTTCC AGCGCACGTTGCAAA thiD 3027609 - 3026809 - | phosphomethylpyrimidine kinase TERM 3302 3026874 - 3026835 - G 72 -10.1 -3.37533 | gap 1, opp_overlap 3026838, overlap 3026831 3026828 GGTGAAAATGATGAA CAGGCCCGATGCCCTG CCCCACCTC CAGGGTATCGG-CCTG TTCCAGCGCACGTTG TERM 3303 3027465 - 3027475 + g 74 -6.8 -4.36914 | GATAAACCGACTGCA CACC ACG GGTG TTTTGTGCCACCAGC TERM 3304 3027672 - 3027654 - H 75 -8.9 -3.57561 | GGCTAATGGCGTAAA TTCAGCC GCAGT GGCTGAA AAGAGAACGGCAGGT YP_2726 3028119 - 3028598 + | hypothetical protein TERM 3305 3028973 - 3028952 - T 84 -10.1 -3.74693 | TGCCACCGTATTAAA GGTGATCGC TCAG GCGGTCACC GAACTCGATAATAAA YP_2728 3030155 - 3028947 - | transposase for the IS285 insertion element TERM 3306 3030610 - 3030620 + G 76 -6.8 -4.49377 | GCTAAAATAGCCATT GTCG CGG CGAC TTCTTTTATTGTAGG proP27 3030340 - 3030861 + | hypothetical protein YP_2730 3030960 - 3031253 + | hypothetical protein YP_2731 3031656 - 3032051 + | hypothetical protein TERM 3307 3032065 - 3032055 - f 70 -2.6 -4.96848 | CTTTGTAGATAAAAA TAAA ATA TTTA ACAAGAAAATAATTT YP_2732 3032089 - 3032508 + | hypothetical protein YP_2733 3032572 - 3032970 + | hypothetical protein hcp6 3032994 - 3033473 + | hemolysin-coregulated protein (uncharacterized) TERM 3308 3033559 - 3033527 - T 100 -11.3 -5.1286 | opp_overlap 3033534, overlap 3033533 3033534 TAAAAACCATAAAAA TAAATATCCTCCGGC ATA GCCGGAGGTTTTTCA TATGCGCCTATAAGG TERM 3309 3033553 - 3033533 - T 100 -12.5 -4.09508 | opp_overlap 3033534, overlap 3033527 3033534 CCATAAAAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 3310 3033534 - 3033552 + T 100 -16 -4.8048 | opp_overlap 3033533 3033527 3033534 CATAAAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 3311 3033552 - 3033534 - T 100 -16 -3.04078 | opp_overlap 3033534, overlap 3033533 3033527 CATAAAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC tnp_31 3034142 - 3033633 - | transposase for the IS1541 insertion element TERM 3312 3034204 - 3034222 + r 100 -16 -4.36914 | opp_overlap 3034204, overlap 3034218 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAC TERM 3313 3034222 - 3034204 - R 100 -16 -3.07307 | opp_overlap 3034204 3034218 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAC TERM 3314 3034244 - 3034263 + r 70 -7.8 -3.58343 | opp_overlap 3034244, overlap 3034218 GGGCACAACAAAAAA CCGCCTAA TATT TAAGGCGG TTTCAGACTGCTGGC TERM 3315 3034263 - 3034244 - R 100 -7.8 -5.55769 | opp_overlap 3034218 3034244 GGGCACAACAAAAAA CCGCCTAA TATT TAAGGCGG TTTCAGACTGCTGGC TERM 3316 3034399 - 3034418 + r 84 -6.4 -4.98616 | opp_overlap 3034399 GTCAATAACCTCAAA CCGCCT AATATTCA AGGCGG TTTTTGCTATTTTCA guaA 3036043 - 3034466 - | bifunctional GMP synthase/glutamine amidotransferase protein TERM 3317 3036210 - 3036180 - R 100 -9.9 -5.79595 | opp_overlap 3036180 3036183 3036184 TTTTAAAATAAAAAA TAACCATCTGATG GCCAG CACCAGATGATTA TTTAACTAATTGTTA guaB 3037770 - 3036223 - | inositol-5-monophosphate dehydrogenase TERM 3318 3037147 - 3037163 + g 70 -2.2 -5.00616 | overlap 3037149 GACCAACACTTTCTC TACACG TTTTT CGTGCA TTTTTTGCAGCACAA xseA 3037856 - 3039235 + | exodeoxyribonuclease VII large subunit YP_2739 3039568 - 3039344 - | hypothetical protein YP_2740 3040573 - 3039617 - | hypothetical protein TERM 3319 3040724 - 3040713 - R 85 -2.2 -5.77988 | ATATAGAGAAAAAAA CCAG GCTA CTGA CAAACCCCGATGACG TERM 3320 3040801 - 3040775 - R 86 -10.1 -3.9749 | gap 1, overlap 3040776 AGGCAGAAGAGTAAA GTGTCCGCGCCA GAGA TGGCGCGG-CTC AAGCTCCCAAGGAAG engA 3042407 - 3040920 - | GTP-binding protein EngA TERM 3321 3042488 - 3042510 + r 100 -10.5 -4.63527 | opp_overlap 3042467 3042488 TTTTTAGAATACAAA CGGCCCCTG AGTCC CAGGAGCCG TTTTTGAGGTACTGG TERM 3322 3042510 - 3042488 - R 100 -13.4 -4.27117 | opp_overlap 3042488, overlap 3042467 TTTTTAGAATACAAA CGGCCCCTGA GTC CCAGGAGCCG TTTTTGAGGTACTGG YP_2742 3043736 - 3042555 - | outer membrane protein assembly complex subunit YfgL YP_2743 3044383 - 3043748 - | hypothetical protein hisS 3045671 - 3044397 - | histidyl-tRNA synthetase ispG 3047007 - 3045880 - | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase TERM 3323 3045923 - 3045939 + g 74 -9.5 -3.55203 | ACAATCCGGTTATTC GCATCAA GAA TTGATGC TTTGGCACGAATTTT TERM 3324 3046884 - 3046895 + g 73 -5.8 -4.44797 | opp_overlap 3046877, overlap 3046892 GGGCAACAGTGGCAT CCAC ATCC GTGG TTTTGGTATTGGTCA YP_2746 3048106 - 3047069 - | hypothetical protein pilF 3048845 - 3048096 - | putative fimbrial biogenesis protein YP_2748 3050195 - 3048999 - | hypothetical protein TERM 3325 3050291 - 3050330 + r 74 -9.2 -3.36518 | opp_overlap 3050291 3050296, overlap 3050293 AGAATGTATAAATAA TAGAACGCCCCAGCAGAG CTGT CTCTACTGGGGCGTGGCA TTGTACAAATTTTAA TERM 3326 3050330 - 3050291 - R 100 -13.6 -4.11906 | opp_overlap 3050291 3050293, overlap 3050296 AGAATGTATAAATAA TAGAACGCCCCAGCAGAG CTGT CTCTACTGGGGCGTGGCA TTGTACAAATTTTAA TERM 3327 3050293 - 3050329 + r 80 -11.6 -2.61429 | gap 1, opp_overlap 3050291 3050296, overlap 3050291 AATGTATAAATAATA G-AACGCCCCAGCAGAG CTGT CTCTACTGGGGCGTGGC ATTGTACAAATTTTA TERM 3328 3050325 - 3050296 - R 100 -20.1 -3.93744 | opp_overlap 3050293 3050291, overlap 3050291 GTATAAATAATAGAA CGCCCCAGCAGAG CTGT CTCTACTGGGGCG TGGCATTGTACAAAT ndk 3050885 - 3050457 - | nucleoside diphosphate kinase TERM 3329 3050587 - 3050569 - G 70 -3 -4.86033 | opp_overlap 3050572 3050580, overlap 3050570 AAACTGTCAGAAAAA TCAGCACG TAG CGTACCGG CTAGTGCGTTATCTG YP_2750 3053632 - 3051212 - | hypothetical protein TERM 3330 3051807 - 3051795 - G 71 -6.3 -4.37092 | ACCGTCTCGATAAAA TGGTA ATC TACCA GTGCCAGTTCATAAC TERM 3331 3052754 - 3052733 - G 76 -3.1 -5.17507 | AAAACGCAATAAAAA TGACAAA TTACTACT TTTGTCA CTTAAATTAAACAAA TERM 3332 3053138 - 3053148 + g 76 -3.2 -5.12068 | GACTGTAGTTTGCAT TCCT GGA GGGA TTTTTATTGAATATA YP_2751 3053807 - 3054064 + | hypothetical protein TERM 3333 3055490 - 3055467 - g 83 -5.2 -5.13521 | overlap 3055470 AAAGCAGCTAAAAAA GAACTTGACG CTAT CGCCAAGGCC CAAAAAGCAGTTGAG TERM 3334 3055487 - 3055470 - g 82 -7.7 -4.64763 | overlap 3055467 GCAGCTAAAAAAGAA CTTGACG CTAT CGCCAAG GCCCAAAAAGCAGTT TERM 3335 3055803 - 3055786 - g 76 -6.3 -4.67942 | gap 1 CGGAACAAACTAAAA CAGCC-CT TGA AGCGGCTG AAAAAGCTAAAGAAG yapA 3054348 - 3058832 + | putative autotransporter protein TERM 3336 3058922 - 3058947 + T 100 -11.1 -4.7078 | opp_overlap 3058921 3058920 3058922 TGACTGATAAAAACC GCAGGGGGCTG CAAT TGGCTCCCTGC TTTTTACCTGATTAA TERM 3337 3060143 - 3060122 - T 84 -10.1 -3.74693 | TGCCACCGTATTAAA GGTGATCGC TCAG GCGGTCACC GAACTCGATAATAAA YP_2754 3061325 - 3060117 - | transposase for the IS285 insertion element TERM 3338 3062028 - 3062038 + H 79 -8.2 -4.15565 | GCGGGCCCACGACTT GGCG ATG CGCC TTTTGCCATCATCAA fimA5 3062525 - 3063133 + | fimbrial protein YP_2757 3063217 - 3063762 + | hypothetical protein TERM 3339 3064070 - 3064056 - g 70 -8.6 -3.75024 | TTGCACCACCAAGAA TTCCAG TCT CTGGAA AGCGCATGGCGTGGG YP_2758 3063765 - 3065288 + | hypothetical protein TERM 3340 3065767 - 3065777 + G 76 -5.4 -4.8622 | GGTTCAGGTAAAGCC TCTG TTT CAGA TTTTTGCTTCGCACA YP_2759 3065530 - 3066099 + | hypothetical protein TERM 3341 3066147 - 3066125 - f 75 -9.1 -3.72893 | opp_overlap 3066125 CATGTCGCTATCAAA CTTGCCACC TTTGG GGTGGCAGG TTTTCTTAATAAGTG TERM 3342 3066125 - 3066147 + F 100 -12 -4.72497 | opp_overlap 3066125 CATGTCGCTATCAAA CTTGCCACCT TTG GGGTGGCAGG TTTTCTTAATAAGTG YP_2760 3066313 - 3066912 + | hypothetical protein TERM 3343 3068176 - 3068160 - g 82 -3.6 -5.31456 | overlap 3068162 TGAATTGATAAAAAA TGGCCC CTTCT GGGACA AAGTTTCCAATGCTG YP_2761 3066916 - 3068265 + | hypothetical protein TERM 3344 3068289 - 3068305 + F 88 -9.4 -4.25104 | AGTGATTTGAACCTT GGAGGC TCAAT GCCTCC TTTTGATAGAAGCAG TERM 3345 3068922 - 3068940 + F 100 -13.2 -4.01078 | CCAGGGGGTAATCTG CTCTCCTG ATT CAGGAGAG TTTATGGTCACTTTT YP_2763 3068944 - 3069966 + | transposase for insertion sequence IS100 TERM 3346 3070047 - 3070033 - g 77 -11.4 -3.3506 | overlap 3070024 TGGAAAGCCTTATAA GCGCAG CGC CTGCGC TGTCACAACAGGCAG dnaC_21 3069963 - 3070745 + | transposase/IS protein TERM 3347 3071184 - 3071170 - f 82 -5 -5.37043 | opp_overlap 3071170 3071172, overlap 3071172 ATTGTATATAAAAAA CACACA GAT TGTATG TGTTATGTATATAAA fUI1 3071341 - 3072852 + | putative permease TERM 3348 3072898 - 3072872 - T 100 -15.3 -4.18303 | opp_overlap 3072872 AGCAGAAACGACAAA GCCCTGAGTTA TTACT TAACTCAGGGC TTCTAAATTTTGGCG TERM 3349 3072872 - 3072898 + T 100 -15.3 -3.52113 | opp_overlap 3072872 AGCAGAAACGACAAA GCCCTGAGTTA TTACT TAACTCAGGGC TTCTAAATTTTGGCG dnaQ 3073862 - 3073098 - | DNA polymerase III subunit epsilon TERM 3350 3074213 - 3074193 - g 74 -2.4 -5.11033 | overlap 3074194 3074195 CATAACTGGAAAAAA CGCGGCTG GAAAA CAGCCGAT CGTAAGCCAGTGCGC rnhA 3073932 - 3074396 + | ribonuclease H smtA8 3075170 - 3074451 - | hypothetical protein TERM 3351 3074593 - 3074619 + gF 80 -8.7 -3.9461 | overlap 3074594 CATCCCAACGCAGGC AGGTGGGTACT GATAA AGTGCCCACCG TTCTTATTGAAGGGC TERM 3352 3074594 - 3074618 + gF 86 -12.2 -2.96444 | overlap 3074593 ATCCCAACGCAGGCA GGTGGGTACT GATAA AGTGCCCACC GTTCTTATTGAAGGG TERM 3353 3075499 - 3075464 - gH 76 -3.2 -5.07107 | overlap 3075466 3075487 GAAACTGCGAAAAAA GGGGCCACCGTCAT TGTTAATG ATGGCGATAGCCTC ACCATTGCCGGACAA gloB3 3075128 - 3075970 + | hydroxyacylglutathione hydrolase TERM 3354 3076801 - 3076769 - g 76 -7 -4.58395 | TTTATGTTCCAAAAA TGCTGGCCTTGGGT GATTT ACTCAAGAACAGCA AAAAGTACGGTATAA mltD 3075979 - 3077430 + | membrane-bound lytic murein transglycosylase D TERM 3355 3077452 - 3077467 + T 100 -9 -5.71983 | opp_overlap 3077452 AATCACTGTCAAAAA GCACCT TTCG AGGTGC TTTTTTTATGGTTGG TERM 3356 3077467 - 3077452 - T 100 -9 -4.60889 | opp_overlap 3077452 AATCACTGTCAAAAA GCACCT TTCG AGGTGC TTTTTTTATGGTTGG YP_2772 3078255 - 3077473 - | hypothetical protein TERM 3357 3077583 - 3077569 - G 76 -3.4 -5.13354 | overlap 3077571 GCGATAAAAAATAAA GTCCAG AGG CCGGCC GAACGCACGACTGCG YP_2773 3079083 - 3078619 - | hypothetical protein TERM 3358 3079093 - 3079075 - G 100 -9.6 -5.83211 | CACCAAAATAAAAAA CCACCTCA ATG TAAGGTGG CTCGTCCAGTGTCTT dkgB 3079921 - 3079118 - | 2,5-diketo-D-gluconate reductase B TERM 3359 3079773 - 3079799 + g 71 -5.1 -4.47397 | overlap 3079778 TTAATACCACTTTCT TGGATTGCCTG ACCAA CAGGCGCTTCA TTTTCATATATTTGT TERM 3360 3080247 - 3080267 + r 100 -14.1 -4.14739 | opp_overlap 3080247 TATAAATGCAAAAAA CCCTGAATC TAA GATTCAGGG TTTTGCAATAAGTGG TERM 3361 3080267 - 3080247 - R 100 -14.1 -5.24449 | opp_overlap 3080247 TATAAATGCAAAAAA CCCTGAATC TAA GATTCAGGG TTTTGCAATAAGTGG TERM 3362 3080702 - 3080692 - R 74 -6.8 -4.27316 | opp_overlap 3080692 TCTCTCAATTCAAAA CACC TTC GGTG TTGTAAGGTTAAGCC TERM 3363 3081814 - 3081825 + r 74 -4.4 -5.06816 | CCACTTTCGTGTTTG CACA GTGC TGTG TTTTTATTAAACAGT TERM 3364 3082321 - 3082339 + r 82 -10.3 -3.57798 | overlap 3082314 CTTGGTCTTCCGGCG TGCGGGT TTTTC ACCCGCA TTATCGTTACTTATG TERM 3365 3083777 - 3083814 + r 78 -5.7 -4.7629 | opp_overlap 3083771 3083777 3083780, overlap 3083780 ATTGTTAAAGAGCAA TATCGTAAACACGACTT GGTA AAGTCATCTTTACGTTA TTTTTCAGTTCATAA TERM 3366 3083780 - 3083811 + r 78 -7.4 -4.47888 | opp_overlap 3083777 3083771 3083780, overlap 3083777 GTTAAAGAGCAATAT CGTAAACACGACTT GGTA AAGTCATCTTTACG TTATTTTTCAGTTCA hisB2 3086628 - 3086062 - | D,D-heptose 1,7-bisphosphate phosphatase metN 3086815 - 3087846 + | DL-methionine transporter ATP-binding subunit TERM 3367 3088257 - 3088246 - g 74 -4.4 -4.79223 | GCAGATCATCAAAAA GGTA TTAT TACC AGAAGCCCTGCCCGG YP_2777 3087839 - 3088492 + | DL-methionine transporter permease subunit metQ 3088556 - 3089371 + | DL-methionine transporter substrate-binding subunit TERM 3368 3089404 - 3089427 + F 100 -16.8 -3.97674 | opp_overlap 3089407, overlap 3089407 TATTGAATATATCGA CAAGACGGGC TATA GCCCGTCTTG TTATTTGAATAATAG TERM 3369 3089424 - 3089407 - f 100 -12.7 -3.42583 | opp_overlap 3089407 3089404 TGAATATATCGACAA GACGGGC TATA GCCCGTC TTGTTATTTGAATAA TERM 3370 3089407 - 3089424 + F 100 -12.7 -4.10744 | opp_overlap 3089407, overlap 3089404 TGAATATATCGACAA GACGGGC TATA GCCCGTC TTGTTATTTGAATAA rcsF 3089489 - 3089896 + | outer membrane lipoprotein TERM 3371 3089969 - 3089949 - g 74 -3.9 -4.99645 | overlap 3089951 ACCGTATAAAGAAAA GTTTGCGGT ACC ACGGCAACC CGGTTTGGTTGAGGA YP_2780 3089893 - 3090600 + | hypothetical protein TERM 3372 3092358 - 3092347 - g 86 -5.8 -5.09762 | AGTGGAATACAAAAA CCGA CGCG TCGG TGAGAAACAAATGAT proS 3090704 - 3092422 + | prolyl-tRNA synthetase TERM 3373 3092498 - 3092533 + T 76 -7.7 -4.23999 | gap 2, opp_overlap 3092501 GGGTATTTTACTGAT GAAGCCGC-CGG-AG AACTTGAA CTACCGTGCGGCTTC TTATTTTAGCTATGG cutF 3093284 - 3092556 - | lipoprotein involved with copper homeostasis and adhesion prfB1 3093764 - 3093324 - | hypothetical protein TERM 3374 3093752 - 3093777 + g 70 -9.1 -3.6445 | overlap 3093753 3093755 ACACACTTATTGCCC GTAGTTTTGCC ATTC GGCAAAACTAA TTTCCAGATTATTCT TERM 3375 3093753 - 3093776 + g 77 -12.6 -2.77947 | overlap 3093752 3093755 CACACTTATTGCCCG TAGTTTTGCC ATTC GGCAAAACTA ATTTCCAGATTATTC TERM 3376 3093755 - 3093774 + g 70 -10.8 -2.92935 | overlap 3093753 3093752 CACTTATTGCCCGTA GTTTTGCC ATTC GGCAAAAC TAATTTCCAGATTAT YP_2784 3094357 - 3093743 - | hypothetical protein TERM 3377 3094697 - 3094682 - g 77 -11.8 -3.08679 | opp_overlap 3094683 CTCCGTTAGGGAACA GGCGGC CTAT GCCGCC GCTAACTTATTGGTG YP_2785 3094533 - 3094733 + | hypothetical protein YP_2786 3094720 - 3094980 + | Rho-binding antiterminator TERM 3378 3094995 - 3095030 + T 100 -17 -4.1043 | opp_overlap 3095002, overlap 3095002 GTTTCCACTTCCTTG TGAAAAACGGGTCGCT GAAG AGCGGCCCGTTTTGCA TTTATCCTATTTACA TERM 3379 3095002 - 3095023 + T 100 -13.7 -4.40173 | opp_overlap 3095002, overlap 3094995 CTTCCTTGTGAAAAA CGGGTCGCT GAAG AGCGGCCCG TTTTGCATTTATCCT TERM 3380 3095023 - 3095002 - T 100 -11.5 -4.56597 | opp_overlap 3095002 3094995 CTTCCTTGTGAAAAA CGGGTCGCT GAAG AGCGGCCCG TTTTGCATTTATCCT YP_2787 3095562 - 3095245 - | putative cytochrome tilS 3097181 - 3095799 - | tRNA(Ile)-lysidine synthetase TERM 3381 3095939 - 3095919 - G 75 -9 -3.84185 | TTCACCGAAATATAA CAGCGGAA TACGT TCCCGCTG CCATGGGGGAATACC gloA2 3097581 - 3097183 - | hypothetical protein TERM 3382 3097742 - 3097720 - R 100 -5.5 -6.08563 | opp_overlap 3097720 3097728 3097733 AATAGATAAAAAAAA CCGGCGC TTAAATTCC GCACCGG CTTTTATCAGTTGGC accA 3098724 - 3097765 - | acetyl-CoA carboxylase carboxyltransferase subunit alpha TERM 3383 3097954 - 3097977 + g 76 -11 -3.31792 | CTTCAGTTCTTTTAG GCGATGTGCA GTAA TGCCCATCGC TTCTGCGGCTAATGG TERM 3384 3098641 - 3098669 + g 71 -6.8 -4.27584 | gap 1 ATCTAATTTTTCGTC TTGAC-GGCTGAC TGCA GTCAGCGAGTCAA TTTTCGCTTCCAGCT dnaE 3102252 - 3098737 - | DNA polymerase III subunit alpha TERM 3385 3099591 - 3099601 + g 76 -5.4 -4.8048 | opp_overlap 3099591 GTTTTTCTAAAATAC GCTT GTT AAGC TTTTTGGTATCGACA TERM 3386 3100049 - 3100072 + g 83 -5.2 -5.07486 | opp_overlap 3100049, overlap 3100051 TCTTCAAATACAGAA CGCTGCTTAG CCAT CTCAGCAGGG TTTTTCTTACCCATG TERM 3387 3100871 - 3100858 - G 71 -6.7 -4.25056 | overlap 3100862 GATCCGATCAACAAA GCCAT AGGG ATGGC CTAATACACGGCCGA TERM 3388 3101318 - 3101334 + g 76 -5.1 -4.82901 | overlap 3101319 AATTCCAAACGTTCT TCCAAAC CTT GTTTGGC TTTTTCTACCAGAAA rnhB 3102978 - 3102382 - | ribonuclease HII TERM 3389 3102803 - 3102831 + g 80 -2.3 -5.50499 | overlap 3102804 3102805 3102807 TCAGTGATTTCGTCA TACAGTGACAGGC GGC GCTTCTCGCTGAG TTTTTTTGAATCTGC lpxB 3104159 - 3102975 - | lipid-A-disaccharide synthase lpxA 3104951 - 3104163 - | UDP-N-acetylglucosamine acyltransferase fabZ 3105485 - 3104955 - | (3R)-hydroxymyristoyl-ACP dehydratase TERM 3390 3105520 - 3105508 - R 70 -2.7 -5.00616 | overlap 3105509 TTCCTGTCTAAAAAA CTGAT GCT ATCAA CAACACGGCCTGCAC lpxD 3106665 - 3105643 - | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase TERM 3391 3106616 - 3106584 - G 70 -11.4 -2.63823 | gap 1, overlap 3106572 3106581 3106580 AATGCATAGAAGCGA TGC-CGGTGATGACA AGAT CGCCATCACCGTGCA CCTGTGCATCCAACT hlpA 3107259 - 3106669 - | periplasmic chaperone TERM 3392 3106787 - 3106805 + g 70 -4.6 -4.6759 | opp_overlap 3106787 3106782 ACAGATTTAACAGCA TCCTGA ATACGGC TCAGGA TTTTGTTACGCTCTT YP_2798 3109711 - 3107324 - | outer membrane protein assembly factor YaeT TERM 3393 3108701 - 3108711 + g 71 -5.4 -4.49311 | overlap 3108682 ATCCACGTTGATATG CAGT TTA ACTG TTTTATCGTCATCAT YP_2799 3111103 - 3109748 - | zinc metallopeptidase cdsA 3111980 - 3111132 - | CDP-diglyceride synthase uppS 3112748 - 3111990 - | undecaprenyl pyrophosphate synthetase TERM 3394 3112505 - 3112493 - G 83 -5.5 -5.06414 | GTGCTCGAACAAAAA GCTCC ATC AGAGC GGTCACTTCTTGGTC TERM 3395 3112837 - 3112818 - R 100 -8.6 -5.63504 | gap 1, opp_overlap 3112818, overlap 3112830 AAGTGCACAAAAAAA GCCGTGTAC CAA GT-CACGGC TTCTGGAGTGACAGC dxr 3114168 - 3112972 - | 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_2803 3114292 - 3114092 - | hypothetical protein TERM 3396 3114367 - 3114338 - R 100 -11.5 -5.44721 | gap 1, opp_overlap 3114343, overlap 3114343 ATGACCGGAAAAAAA GCA-AAGCGCCGCC TAA GGCGACGCTTATAC AATGCGAGTAGAGAT TERM 3397 3114361 - 3114343 - R 100 -13.8 -4.5187 | opp_overlap 3114343, overlap 3114338 CGGAAAAAAAGCAAA GCGCCGCC TAA GGCGACGC TTATACAATGCGAGT TERM 3398 3114343 - 3114361 + r 86 -11.6 -3.32963 | opp_overlap 3114338 3114343 CGGAAAAAAAGCAAA GCGCCGCC TAA GGCGACGC TTATACAATGCGAGT frr 3114939 - 3114382 - | ribosome recycling factor TERM 3399 3114875 - 3114894 + g 70 -4.4 -4.65895 | gap 1, overlap 3114875 3114876 ATTTTACTAATGTGG T-TCTGGAA TGC TTCCAGACA TTTTTCCATGCGCAC pyrH 3115800 - 3115075 - | uridylate kinase TERM 3400 3115116 - 3115134 + g 71 -5.8 -4.33153 | opp_overlap 3115118, overlap 3115118 TCTCACCCATCACCA CACGACGC AAA GCGCCGGG TTTATTCATGTTGAA TERM 3401 3115417 - 3115404 - G 73 -5.3 -4.72986 | TACCCGCAGCAAAAA TAACC ACAC GGTTA TGACGCAGCAAGCTA TERM 3402 3115999 - 3115976 - R 100 -12.4 -4.68384 | opp_overlap 3115976 ATCGAGTGAATAAAA TGGAACCGCC TATT GGCGGCCCCA TTTGGAGCATTAAGA TERM 3403 3115976 - 3115999 + r 70 -8 -3.57561 | opp_overlap 3115976 ATCGAGTGAATAAAA TGGAACCGCC TATT GGCGGCCCCA TTTGGAGCATTAAGA tsf 3116866 - 3116009 - | elongation factor Ts TERM 3404 3116938 - 3116920 - R 100 -16 -3.74792 | CATTAGATATGCAAA GGGGGCCT ATA AGGCCCCC CTAACCAACATATTT TERM 3405 3117001 - 3117013 + r 76 -7.7 -4.16842 | CGGACTTATTATTCA GCTTC TAC GAAGC TTTCTTCCGCCTGAA rpsB 3117719 - 3116994 - | 30S ribosomal protein S2 ampM 3118154 - 3118945 + | methionine aminopeptidase TERM 3406 3118969 - 3118955 - g 83 -12.8 -3.6216 | opp_overlap 3118955, overlap 3118949 GAGTAATAATGACAA GCCGGC ACC GCCGGC TTTTTTATGGGCTGC TERM 3407 3118955 - 3118969 + G 100 -12.8 -5.26316 | opp_overlap 3118949 3118955 GAGTAATAATGACAA GCCGGC ACC GCCGGC TTTTTTATGGGCTGC TERM 3408 3120890 - 3120880 - g 70 -4.6 -4.65895 | TTTGCGACCGAAAAA CAGC TAC GCCG CGGAATGCAAAATAG glnD 3118948 - 3121686 + | PII uridylyl-transferase dapD 3121861 - 3122685 + | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase TERM 3409 3122695 - 3122715 + F 100 -8.3 -5.53288 | opp_overlap 3122694 3122692 3122695 3122697 GACTAAGATTAAGAG TAGCGGG CTAACCA CCCGCTA TTTTTTTGCCTTACG TERM 3410 3123132 - 3123107 - g 80 -2.5 -5.46706 | ATTTGAAAAGAAAAA TTCTGGATGAC CTAC GTCACCTGGAA AGTGTTGTCACCAAT smc2 3122809 - 3123198 + | hypothetical protein TERM 3411 3123267 - 3123232 - T 86 -12.1 -3.17194 | overlap 3123234 ACCTCGGTAACCGAA TACGTATTGTGACAA CGAAAC TTGCCACAATACGCA ATAAAATCAAGATAT TERM 3412 3123265 - 3123234 - T 93 -12.5 -3.14878 | overlap 3123232 CTCGGTAACCGAATA CGTATTGTGACAA CGAAAC TTGCCACAATACG CAATAAAATCAAGAT fldA3 3123737 - 3123288 - | flavodoxin rluA2 3124538 - 3123765 - | tRNA pseudouridine synthase C YP_2814 3125008 - 3124538 - | hypothetical protein TERM 3413 3125054 - 3125014 - R 100 -11.9 -6.17669 | opp_overlap 3125025, overlap 3125024 3125025 AACAAAACAAAAAAA CAAATAAATATCCTCCGGC ATA GCCGGAGGTTTTTCATATG CGCCTATAAGGCTCT TERM 3414 3125044 - 3125024 - R 100 -12.5 -4.05342 | opp_overlap 3125025, overlap 3125014 3125025 AAAAACAAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 3415 3125043 - 3125025 - R 100 -16 -2.99545 | opp_overlap 3125025, overlap 3125024 3125014 AAAACAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 3416 3125025 - 3125043 + r 100 -16 -4.8048 | opp_overlap 3125024 3125014 3125025 AAAACAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC tnp_32 3125633 - 3125124 - | transposase for the IS1541 insertion element TERM 3417 3125713 - 3125695 - R 100 -16 -3.07307 | opp_overlap 3125695 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 3418 3125695 - 3125713 + r 100 -16 -4.36914 | opp_overlap 3125695 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 3419 3125732 - 3125755 + r 88 -12.5 -2.67189 | opp_overlap 3125732, overlap 3125729 3125728 TCTGGGCACAAAAAA GGGGTACTG TTTTAC CAGTACCCC TCAATTCGTTTTATA TERM 3420 3125755 - 3125732 - R 100 -12.5 -5.24129 | opp_overlap 3125732 3125729 3125728 TCTGGGCACAAAAAA GGGGTACTG TTTTAC CAGTACCCC TCAATTCGTTTTATA syd 3126823 - 3126272 - | SecY interacting protein Syd queF 3126955 - 3127800 + | 7-cyano-7-deazaguanine reductase TERM 3421 3128336 - 3128348 + G 72 -4.1 -4.90471 | GAGCTCCAGTCATTT GACTA ACC TGGTC TTTTCTATTTTACGT TERM 3422 3128966 - 3128989 + G 75 -10.3 -3.42354 | opp_overlap 3128964 3128966 3128969 GCCACTGGTGAAAGA GTATCGCCG TAATAC CGGCGATGC TTATAGCTTCAACTG YP_2818 3127953 - 3129317 + | hypothetical protein TERM 3423 3129406 - 3129393 - f 75 -3.1 -5.1861 | TTGAGCAGCAAAAAA TGACA AATC TGCCA AGAGTAAATTTAAAT xni 3129577 - 3130332 + | exonuclease IX TERM 3424 3130370 - 3130347 - T 100 -14.6 -4.90455 | ATATACGCATAAAAA CTAAGGGGCC AATA GGCCCCTCAG ACTGCTGACAAACCC TERM 3425 3130455 - 3130429 - T 84 -10.1 -3.82218 | gap 1, overlap 3130430 3130445 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACTACATGG TERM 3426 3130456 - 3130430 - T 72 -10.1 -2.88849 | gap 1, overlap 3130429 3130445 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACTACATGGA TERM 3427 3130537 - 3130552 + T 86 -11.8 -3.16154 | opp_overlap 3130533 3130532 TTGTCAATAACCTCA GGGGCC AACA GGCCCC TTAAATATGATGTTA YP_2820 3131689 - 3130583 - | putative RNA 2'-O-ribose methyltransferase YP_2821 3132101 - 3131682 - | hypothetical protein TERM 3428 3131780 - 3131738 - G 73 -6.2 -4.46404 | opp_overlap 3131760 3131762, overlap 3131742 CAATCAACATCAAAA TCCATCCCGCCAGAAAACAG ACT CCGCCTACTGGCGTGATATA TATCCACAGTCTCAG TERM 3429 3132049 - 3132037 - G 100 -9.1 -5.47431 | GCAACATAGAAAAAA CCGCT CAG AGCGG AAAATATCAGCATTA gcvA 3133160 - 3132243 - | DNA-binding transcriptional activator GcvA TERM 3430 3133394 - 3133412 + H 84 -3.8 -5.54192 | opp_overlap 3133397, overlap 3133395 3133397 TCTGGTATGCCAGAC ATAGTAGC TAA GCTACTGC TTTTTTTCACTTCCT TERM 3431 3133395 - 3133411 + H 72 -7.3 -3.90888 | opp_overlap 3133397, overlap 3133394 3133397 CTGGTATGCCAGACA TAGTAGC TAA GCTACTG CTTTTTTTCACTTCC TERM 3432 3133465 - 3133485 + H 100 -9.7 -6.00086 | TAGTGATTTTATGCA GCACCGTTA TTT TGGCGGTGC TTTTTTTTATCCTAT csdB2 3133751 - 3135025 + | cysteine sulfinate desulfinase YP_2824 3135160 - 3135603 + | hypothetical protein YP_2825 3136466 - 3135639 - | molybdopterin/thiamine biosynthesis family protein TERM 3433 3135731 - 3135720 - G 71 -5.8 -4.31895 | AGACACAGCAACAAA GCCA AACG TGGC AGTAACCATCGTTGC TERM 3434 3136555 - 3136570 + r 86 -11.8 -3.14211 | opp_overlap 3136555 AGTACTCATGCAAAA GCGGCC AACT GGCCGC TTAATCAAAACAAAT TERM 3435 3136570 - 3136555 - R 100 -11.8 -4.20084 | opp_overlap 3136555 AGTACTCATGCAAAA GCGGCC AACT GGCCGC TTAATCAAAACAAAT mltA 3137781 - 3136609 - | murein transglycosylase A TERM 3436 3136651 - 3136674 + g 75 -8.8 -3.86897 | gap 1 TGACGAATCATTACT GGTAGGCTCGC TCT GCGTGCC-ACC TTTATAAGCAGTGAA TERM 3437 3138304 - 3138317 + r 100 -8.1 -6.02919 | opp_overlap 3138304 GATATCATCATTAGA CACCC TATC GGGTG TTTTTTTGTTTCTGG amiC 3139771 - 3138503 - | N-acetylmuramoyl-L-alanine amidase AmiC precursor argA 3139989 - 3141338 + | N-acetylglutamate synthase TERM 3438 3141343 - 3141361 + F 100 -13.2 -4.01078 | CCAGGGGGTAATCTG CTCTCCTG ATT CAGGAGAG TTTATGGTCACTTTT YP_2829 3141365 - 3142387 + | transposase for insertion sequence IS100 TERM 3439 3142468 - 3142454 - g 77 -11.4 -3.3506 | overlap 3142445 TGGAAAGCCTTATAA GCGCAG CGC CTGCGC TGTCACAACAGGCAG dnaC_22 3142384 - 3143166 + | transposase/IS protein TERM 3440 3143404 - 3143422 + T 100 -16 -4.37092 | opp_overlap 3143404 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAT TERM 3441 3143422 - 3143404 - T 100 -16 -3.07307 | opp_overlap 3143404 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAT TERM 3442 3143435 - 3143469 + T 79 -7.9 -4.33274 | gap 1, opp_overlap 3143440 3143441, overlap 3143437 3143441 GGGTTTTCTGGGCAC AATAACCTCAGGGCGC CTAA GCGCCCTGA-GTCATG TTTTAATCATGTAAC TERM 3443 3143437 - 3143467 + T 86 -10.5 -3.76811 | gap 1, opp_overlap 3143440 3143441, overlap 3143435 3143441 GTTTTCTGGGCACAA TAACCTCAGGGCGC CTAA GCGCCCTGA-GTCA TGTTTTAATCATGTA TERM 3444 3143465 - 3143440 - T 100 -14.7 -3.78934 | opp_overlap 3143437 3143435 3143441, overlap 3143441 TTCTGGGCACAATAA CCTCAGGGCGC CTAA GCGCCCTGAGT CATGTTTTAATCATG TERM 3445 3143464 - 3143441 - T 100 -18.2 -2.87146 | opp_overlap 3143437 3143435 3143441, overlap 3143440 TCTGGGCACAATAAC CTCAGGGCGC CTAA GCGCCCTGAG TCATGTTTTAATCAT TERM 3446 3143441 - 3143464 + T 100 -18.2 -2.96723 | opp_overlap 3143441 3143440, overlap 3143437 3143435 TCTGGGCACAATAAC CTCAGGGCGC CTAA GCGCCCTGAG TCATGTTTTAATCAT YP_2832 3146624 - 3143511 - | hypothetical protein TERM 3447 3144389 - 3144369 - G 75 -9.1 -3.87149 | opp_overlap 3144368 3144369 CGCATCAAATTTAAA GGCAAACAT GCC ATATTTGCC ACTTAGTGATGAGTG YP_2833 3148895 - 3146694 - | hypothetical protein YP_2834 3149945 - 3148995 - | hypothetical protein YP_2835 3150161 - 3149967 - | hypothetical protein YP_2836 3150858 - 3150550 - | hypothetical protein TERM 3448 3151200 - 3151178 - H 88 -9.8 -4.12188 | overlap 3151179 GTACTACCTTTAAAA CGCCGTGCAT TAA ATGCCCGGCA TACAATAGGGTTATA TERM 3449 3151199 - 3151179 - H 79 -11.1 -3.06991 | overlap 3151178 TACTACCTTTAAAAC GCCGTGCAT TAA ATGCCCGGC ATACAATAGGGTTAT cynT2 3151234 - 3151989 + | putative carbonic anhydrase YP_2838 3152732 - 3153148 + | hypothetical protein TERM 3450 3153249 - 3153239 - g 86 -5.4 -5.30189 | overlap 3153231 GATAAGACTAAAAAA TCCT TTT AGGA CACTCAACTGTAATC YP_2839 3153186 - 3153719 + | general secretion pathway protein C TERM 3451 3153827 - 3153842 + G 89 -2.6 -5.8187 | gap 1, opp_overlap 3153827, overlap 3153829 GGCAAAGGAATTAAA TCTATCC ATG GGAT-GA TTTTTTTATTCACTC TERM 3452 3153971 - 3153960 - g 70 -3 -4.79657 | overlap 3153952 AGAATATTAATAAAA CTAT TATC ATAG ATCCTACGGTCCAAG gspD3 3153800 - 3155722 + | general secretion pathway protein D TERM 3453 3156158 - 3156148 - g 82 -4 -5.24129 | opp_overlap 3156148 TCTTTCGATAAAAAA CTTA CTG TAAG ATTTCGTATTGATGG gspE 3155719 - 3157230 + | general secretion pathway protein E hofF 3157211 - 3158419 + | putative general protein secretion protein TERM 3454 3158642 - 3158659 + GF 84 -9.9 -3.76224 | GGATTATCCGACCGA GCAGCAA GGCA TTGCTGC TTTAGTAACTAAACC hofG1 3158439 - 3158876 + | general secretion pathway protein G TERM 3455 3159313 - 3159343 + GF 71 -7 -4.09685 | gap 1, overlap 3159309 CAATTGGTTTTCTCT CCAGAGGAGGAGT ATTCGG ACTTCTCCT-TGG TTTTAAGAAATGAAG hofG2 3158833 - 3159423 + | general secretory pathway proteins G and H and related periplasmic/secreted proteins hofG3 3159461 - 3159805 + | general secretion pathway protein I hofG4 3159777 - 3160394 + | general secretion pathway protein J gspK 3160403 - 3161359 + | general secretion pathway protein K gspL 3161343 - 3162533 + | general secretion pathway protein L YP_2849 3162530 - 3162991 + | hypothetical protein pppA1 3162945 - 3163859 + | prepilin peptidase YP_2851 3164208 - 3163843 - | putative lipoprotein TERM 3456 3166137 - 3166158 + G 77 -10.1 -3.74693 | TTTATTATCGAGTTC GGTGACCGC CTGA GCGATCACC TTTAATACGGTGGCA YP_2853 3164955 - 3166163 + | transposase for the IS285 insertion element TERM 3457 3166371 - 3166355 - f 71 -6.7 -4.15703 | opp_overlap 3166353 3166355 TTGGATAAAGAACAA GATAAAA CGT TTTTATC TGTTTATCAGCAGCA YP_2854 3166528 - 3166929 + | hypothetical protein TERM 3458 3168743 - 3168713 - g 91 -9.1 -4.84359 | overlap 3168715 TTACCTGTAGAAAAA TACTCTCCTCTAC GATTA GCAAAGGAGAGCA CGATTGCTGCTATTG TERM 3459 3168741 - 3168715 - g 80 -9.5 -4.04397 | overlap 3168713 ACCTGTAGAAAAATA CTCTCCTCTAC GATTA GCAAAGGAGAG CACGATTGCTGCTAT cheD2 3167075 - 3168775 + | methyl-accepting chemotaxis protein YP_2856 3169396 - 3168761 - | hypothetical protein gloB4 3170396 - 3169509 - | hypothetical protein lysR16 3170503 - 3171411 + | LysR family transcriptional regulator araJ 3171780 - 3172940 + | putative sugar transport protein lysR17 3173878 - 3172937 - | DNA-binding transcriptional regulator LysR TERM 3460 3174349 - 3174335 - g 70 -11.4 -2.64155 | opp_overlap 3174332, overlap 3174332 3174331 TTTGGGTGAAATCGA GCGTGC CTT GCACGC GGGTTATCAACCGGG lysA 3174093 - 3175355 + | diaminopimelate decarboxylase galR2 3176536 - 3175352 - | DNA-binding transcriptional regulator GalR bisC 3176684 - 3178945 + | putative biotin sulfoxide reductas2 TERM 3461 3179262 - 3179279 + F 100 -11.3 -6.11644 | TTTTATTTGCACCGA CCTACGC AGAT GCGTAGG TTTTTTTTTAGGTAC aas 3179394 - 3181550 + | bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase TERM 3462 3182349 - 3182370 + G 87 -10.1 -4.38712 | gap 1, overlap 3182350 CGATTGGGATTGTGG TGGGCG-CGG GTG CCGCCGCCCG TTTTGTGACGCTAAA TERM 3463 3182350 - 3182369 + G 76 -11.4 -3.22906 | gap 1, overlap 3182349 GATTGGGATTGTGGT GGGCG-CGG GTG CCGCCGCCC GTTTTGTGACGCTAA proP28 3181547 - 3182767 + | hypothetical protein TERM 3464 3182824 - 3182773 - T 83 -11.8 -2.69964 | gap 1, opp_overlap 3182794, overlap 3182791 GCCTGAATGATATGA TTTGTCTGTCATCTGAAAGGATCTC AAG GAGATCC-TTCAGACTGCTGACAAA TATCGCCTTTTGAAA TERM 3465 3182807 - 3182791 - T 84 -10.9 -3.59979 | opp_overlap 3182794, overlap 3182773 GTCTGTCATCTGAAA GGATCTC AAG GAGATCC TTCAGACTGCTGACA YP_2866 3183029 - 3182796 - | hypothetical protein YP_2867 3183108 - 3183359 + | hypothetical protein TERM 3466 3183518 - 3183489 - T 100 -16.5 -3.02511 | GGCACTTTGTCAATA CCCTGAAGGCCGC ATCA GCGGCCTTCAGAA TGCTGACAAACCCCG TERM 3467 3183601 - 3183575 - T 70 -7.2 -3.74872 | gap 1, opp_overlap 3183584, overlap 3183576 AGGCAGGGGAGTAAA GCGTCCGCGCC AGGGAG GGCGCGG-CTC GAGCCTACATGGATG TERM 3468 3183681 - 3183696 + T 91 -11.8 -3.43203 | opp_overlap 3183676 3183675 TGTCAATAACCTCAA GGCCGC ATCA GCGGCC TTCATATTATGATAG tas4 3184776 - 3183736 - | putative aldo-keto reductase TERM 3469 3183888 - 3183877 - G 74 -7.2 -4.16842 | overlap 3183878 CGTACTGGCAACAAA CGGC TGTT GCCG CACAAAGGCCAGAGC TERM 3470 3184539 - 3184551 + g 71 -10.5 -3.1733 | overlap 3184537 3184536 CTAAAATAATTTTTT CGCGG CAA CCGCG TGCTTTTATCCAGCG TERM 3471 3185041 - 3185061 + r 77 -8.3 -3.96298 | AGATATAAAGCACCT GCGGGAT AGAGAAC ATCCCGC TTTAATTAATCACTA mutH 3185833 - 3185147 - | DNA mismatch repair protein TERM 3472 3185542 - 3185569 + g 71 -5.6 -4.49389 | gap 1 TCCCGGTGAGTGGTG CCAC-GCAGACGA ATG TCGTTTCCAGTGG TTTTCCTTGTGCACT TERM 3473 3186088 - 3186102 + G 78 -3.5 -5.08011 | CTGGTTCAATTTACA GCCTT GACGA GAGGC TTTTTTGCGAGTTTT TERM 3474 3186111 - 3186121 + G 83 -5.4 -5.10497 | GAGAGGCTTTTTTGC GAGT TTT ACTC TTTTTTGCGTAACTT YP_2870 3186066 - 3186257 + | hypothetical protein YP_2871 3186254 - 3186505 + | hypothetical protein mutT6 3186531 - 3187058 + | dinucleoside polyphosphate hydrolase TERM 3475 3187231 - 3187261 + G 76 -12.5 -2.62983 | opp_overlap 3187250 3187251, overlap 3187259 GTTACTACCTAATGG CGACCAGGGGGCT GAAAA AGCCCCGTGGGCG TACTATCACGCTGGC TERM 3476 3187260 - 3187250 - g 82 -8.2 -4.57073 | opp_overlap 3187231 3187259, overlap 3187251 CAGGGGGCTGAAAAA GCCC CGT GGGC GTACTATCACGCTGG ptsP 3187071 - 3189317 + | fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain-containing protein lgt 3189568 - 3190440 + | prolipoprotein diacylglyceryl transferase TERM 3477 3190869 - 3190890 + G 82 -7.3 -4.6902 | gap 1, opp_overlap 3190868 3190869, overlap 3190874 CGAACTGGATCAAAT GGCGTTGGCA CCA TGCCA-TGCC TTTTTCCAGTTCTAC thyA 3190447 - 3191241 + | thymidylate synthase TERM 3478 3191251 - 3191269 + F 86 -8.8 -4.36485 | ATTTAATCTTCATAT CGGAGCTG TAA TGGCTCCG TTTTGCGTCTTTTAT TERM 3479 3191373 - 3191358 - g 74 -4.7 -4.82901 | GTCTTCCGATAAAAA TGCGA GTCGTA TCGCA GACCTCCCTGTATTT YP_2876 3191272 - 3191490 + | hypothetical protein TERM 3480 3191555 - 3191543 - g 76 -4.9 -5.04601 | CTTAGAAAGCAAAAA GTTTT TAT AAAAC AAAGATCACTAATAA hofG5 3191477 - 3192046 + | hypothetical protein hofG6 3192037 - 3192645 + | hypothetical protein YP_2879 3192642 - 3193112 + | hypothetical protein hofG7 3193100 - 3193510 + | putative prepilin peptidase dependent protein recC 3193645 - 3197016 + | exonuclease V subunit gamma TERM 3481 3198203 - 3198217 + GF 80 -6.4 -4.88407 | TGGCACAACGTGATG TTGTCG TCG CGGCAA TTTTTGATTACATCA TERM 3482 3198281 - 3198263 - gf 95 -6 -5.52986 | AGGGGATTAAAAAAA GCTATTTC GAT GAAATTGC ACATGTATTGAATCT TERM 3483 3199422 - 3199434 + GF 75 -9.1 -3.61715 | AGAAATTGCTGGTAT GGCAC GTA GTGCC TTGTTAGGGCAGATC ptrA 3197098 - 3199986 + | protease III precursor TERM 3484 3200120 - 3200143 + GF 70 -7.4 -3.78775 | GTTGCTTGGGTTAGG GGGCGATG CTGCATTC CGTCGCCC TTTGATGGTGGAGGA TERM 3485 3201024 - 3201012 - gf 70 -3.3 -4.79223 | GTACAGCAGGAAAAA CGGCA GCG TGCAG AGCTGGGGTTTGATG RecB 3199920 - 3203645 + | exonuclease V subunit beta TERM 3486 3205486 - 3205502 + G 71 -6.5 -4.1552 | overlap 3205487 CGCCATTACCCGCGC CCGTCAG CAT CTGACGC TTTATTGCAGCGATG RecD 3203642 - 3205600 + | exonuclease V subunit alpha TERM 3487 3205624 - 3205601 - T 75 -8.8 -3.66772 | opp_overlap 3205602, overlap 3205602 TTAAATCGCCAATAA TCTCAGGGCA TAAG CGCCCTGAGT TATCTGTTTCAAATA TERM 3488 3205623 - 3205602 - T 89 -12.3 -2.79581 | opp_overlap 3205602, overlap 3205601 TAAATCGCCAATAAT CTCAGGGCA TAAG CGCCCTGAG TTATCTGTTTCAAAT TERM 3489 3205602 - 3205623 + T 95 -11.6 -3.76634 | opp_overlap 3205602 3205601 TAAATCGCCAATAAT CTCAGGGC ATAAGC GCCCTGAG TTATCTGTTTCAAAT dnaC_23 3206631 - 3205849 - | transposase/IS protein TERM 3490 3206547 - 3206561 + g 77 -11.4 -3.3506 | overlap 3206560 CTGCCTGTTGTGACA GCGCAG GCG CTGCGC TTATAAGGCTTTCCA YP_2886 3207650 - 3206628 - | transposase for insertion sequence IS100 TERM 3491 3207672 - 3207654 - R 100 -13.2 -4.01078 | AAAAGTGACCATAAA CTCTCCTG AAT CAGGAGAG CAGATTACCCCCTGG TERM 3492 3207885 - 3207863 - R 100 -8.5 -5.40072 | opp_overlap 3207884 TCCCCCTTAAAAAAA TACCCTACC GGATG GATAGGGTA TCGCTGATATTAACT YP_2887 3208339 - 3207929 - | hypothetical protein YP_2888 3208912 - 3208628 - | hypothetical protein YP_2889 3209304 - 3208909 - | hypothetical protein YP_2890 3209612 - 3209307 - | hypothetical protein YP_2891 3209763 - 3209617 - | hypothetical protein YP_2892 3210249 - 3209767 - | hypothetical protein TERM 3493 3210341 - 3210368 + r 91 -12 -3.4759 | overlap 3210342 TGAGAGGAACGAGTT TGATACGGGGAG TCGA CTCCCCGTAGCG TTGATTATCCTAAGT TERM 3494 3210342 - 3210367 + r 93 -13.3 -2.68072 | overlap 3210341 GAGAGGAACGAGTTT GATACGGGGAG TCGA CTCCCCGTAGC GTTGATTATCCTAAG secD2 3210762 - 3210373 - | hypothetical protein dedA2 3211457 - 3210759 - | DedA family membrane protein YP_2895 3212316 - 3211735 - | putative lipoprotein exuR 3213311 - 3212517 - | DNA-binding transcriptional repressor ExuR TERM 3495 3212890 - 3212927 + g 70 -2.8 -4.81851 | gap 2, opp_overlap 3212887, overlap 3212893 TGGAATTTAAGATCC CATTGAGAGTCACGGAAG CGAT CTTCC-TGACGCGCA-TG TTTTTGAATTTCAAT TERM 3496 3213490 - 3213523 + r 79 -11.1 -3.2115 | opp_overlap 3213492 3213497, overlap 3213492 3213497 GCGGATAACAGGAGA GATGAAAGCCCGATA AATT TACCGGGCTTTCATG TTAGTAGGTCATTTA TERM 3497 3213492 - 3213521 + r 100 -13.7 -3.16264 | opp_overlap 3213492 3213497, overlap 3213490 3213497 GGATAACAGGAGAGA TGAAAGCCCGATA AATT TACCGGGCTTTCA TGTTAGTAGGTCATT TERM 3498 3213521 - 3213492 - R 100 -15.9 -3.02381 | opp_overlap 3213492 3213490 3213497, overlap 3213497 GGATAACAGGAGAGA TGAAAGCCCGATA AATT TACCGGGCTTTCA TGTTAGTAGGTCATT TERM 3499 3213516 - 3213497 - R 84 -10 -3.90358 | opp_overlap 3213492 3213490 3213497, overlap 3213492 ACAGGAGAGATGAAA GCCCGATA AATT TACCGGGC TTTCATGTTAGTAGG TERM 3500 3213497 - 3213516 + r 74 -7.8 -3.95022 | opp_overlap 3213497 3213492, overlap 3213492 3213490 ACAGGAGAGATGAAA GCCCGATA AATT TACCGGGC TTTCATGTTAGTAGG exuT1 3214878 - 3213574 - | ExuT transport protein YP_2898 3214922 - 3215092 + | hypothetical protein uxaC 3215623 - 3217032 + | glucuronate isomerase TERM 3501 3218218 - 3218189 - g 73 -2.9 -5.00616 | gap 1 GCTTTGTGGAAAAAA CCATTA-CGGAAGA GAT TGTTCCGGTATTGG ATCTGCCCGAAGACG uxaB 3217231 - 3218682 + | altronate oxidoreductase uxaA 3218693 - 3220183 + | altronate hydrolase TERM 3502 3220233 - 3220274 + F 75 -8.7 -3.63559 | gap 1, opp_overlap 3220234, overlap 3220231 3220234 CTGTTTTTTATGGAA ACGCACTTCCCCTTCACACT TTA AGC-TGTAGGGGGAGTGCGC TGTTTGCTTATTAAT TERM 3503 3220273 - 3220234 - f 93 -12.2 -3.64703 | gap 1, opp_overlap 3220233 3220231 3220234 TGTTTTTTATGGAAA CGCACTTCCCCTTCACACT TTA AGC-TGTAGGGGGAGTGCG CTGTTTGCTTATTAA TERM 3504 3220234 - 3220273 + F 83 -12.2 -2.77051 | gap 1, opp_overlap 3220234, overlap 3220233 3220231 TGTTTTTTATGGAAA CGCACTTCCCCTTCACACT TTA AGC-TGTAGGGGGAGTGCG CTGTTTGCTTATTAA YP_2902 3220336 - 3220866 + | hypothetical protein TERM 3505 3220906 - 3220882 - T 100 -9.9 -4.51812 | opp_overlap 3220885, overlap 3220884 3220885 TTTGATAACAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCATATGCGCCTAT TERM 3506 3220904 - 3220884 - T 100 -12.5 -3.86244 | opp_overlap 3220885, overlap 3220882 3220885 TGATAACAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 3507 3220903 - 3220885 - T 100 -16 -2.90662 | opp_overlap 3220885, overlap 3220884 3220882 GATAACAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 3508 3220885 - 3220903 + T 100 -16 -4.8048 | opp_overlap 3220885 3220884 3220882 GATAACAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC tnp_33 3221493 - 3220984 - | transposase for the IS1541 insertion element TERM 3509 3221555 - 3221573 + r 100 -16 -4.36914 | opp_overlap 3221555 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 3510 3221573 - 3221555 - R 100 -16 -3.07307 | opp_overlap 3221555 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 3511 3221618 - 3221593 - R 100 -9.8 -5.60993 | opp_overlap 3221593 CTGGGCACAAAAAAA TGCCAGTCAA ACTTAA CTGACTGGCA TTTTGCGTAGGTAAA TERM 3512 3221593 - 3221618 + r 83 -9.1 -4.19817 | opp_overlap 3221593 CTGGGCACAAAAAAA TGCCAGTCA AACTTAAC TGACTGGCA TTTTGCGTAGGTAAA sstT 3222962 - 3221643 - | serine/threonine transporter SstT TERM 3513 3223078 - 3223103 + r 76 -6.9 -4.44667 | gap 1 TGACTTTGGGTATAG CGCTCAAGCC GGAACGA GGC-TGAGCG TTTATTGTTCACACC TERM 3514 3223314 - 3223293 - R 70 -3.7 -4.85653 | gap 1, opp_overlap 3223312, overlap 3223294 3223295 TATATACAAAATAAA TGTGGGGCTA TGG TAGCCCCG-A TCGATAGATTGTAGT mviM5 3224429 - 3223434 - | MocA family oxidoreductase YP_2906 3225156 - 3224647 - | hypothetical protein TERM 3515 3225351 - 3225379 + r 100 -11.7 -4.431 | GGATTAGCGGTCTGT CGATACCTGCACC ATA GGCACAGGTATCG TTTTATCAATGGATA YP_2907 3228379 - 3225395 - | putative autotransporter protein TERM 3516 3227324 - 3227342 + g 70 -9 -3.55378 | overlap 3227322 GATGTTAGAATCGCC TAGCATAT TCC ATATGCTA TGTTTATCGATAAAT TERM 3517 3227853 - 3227871 + g 72 -3.8 -4.8543 | opp_overlap 3227853 GAAACATAGAGAATA CCATTATC ACC GACAGTGG TTTTTGTGGCACTTC TERM 3518 3228743 - 3228761 + H 100 -14.6 -3.54459 | opp_overlap 3228757 3228758 CTTGCGGTGTGGGTT CGCGCTTG GCA CAAGCGCG TTTAAAACGCATTAA rsmC1 3228845 - 3230035 + | putative methyltransferase TERM 3519 3230044 - 3230075 + T 100 -15.2 -3.85879 | overlap 3230070 TTTCTAATCGGTATT TCACAGGGTGGGGT TTTC GCCACACCCTGTGA TTATTCTCAGTTCTA fadH 3232199 - 3230151 - | 2,4-dienoyl-CoA reductase TERM 3520 3231186 - 3231200 + g 70 -2.7 -4.82901 | overlap 3231187 GTTAATTTCATCGGC CCGGC CCTGT GCCGC TTTTTGTACAAAAGC TERM 3521 3232214 - 3232255 + r 82 -3 -5.4756 | gap 2 ACCATTATTGTTATA TCTCCGCCG-CC-CTTACTG AATC CAGCAAGTGGTCGGATGAGA TTTTTTATTCAAATT hdeD 3232954 - 3232385 - | acid-resistance membrane protein YP_2911 3233050 - 3233283 + | hypothetical protein sPS1 3234844 - 3233345 - | putative kinase protein TERM 3522 3234800 - 3234814 + g 73 -6.4 -4.4648 | CTCGTCAACGTACTG GATGGT TTC GCCATC TTTTGTCGTACAGGT YP_2913 3236609 - 3234876 - | hypothetical protein TERM 3523 3237469 - 3237457 - R 70 -7.7 -3.70364 | overlap 3237450 GATAAAATGAGACAA CCTCT ACC AGAGG AACAATCGTTTTAGC TERM 3524 3237747 - 3237713 - R 100 -8.6 -5.626 | opp_overlap 3237716, overlap 3237716 GATGCGACAAAAAAA TAAGGCAAAGCGCC GTGAATG GGGGCTTTGCCTTT ACATTACAGTACCAA TERM 3525 3237744 - 3237716 - R 100 -10.3 -4.89054 | opp_overlap 3237716, overlap 3237713 GCGACAAAAAAATAA GGCAAAGCGCC GTGAATG GGGGCTTTGCC TTTACATTACAGTAC TERM 3526 3237716 - 3237744 + r 86 -10.3 -3.76125 | opp_overlap 3237716 3237713 GCGACAAAAAAATAA GGCAAAGCGCC GTGAATG GGGGCTTTGCC TTTACATTACAGTAC YP_2915 3238452 - 3237751 - | hypothetical protein terX 3239032 - 3238391 - | putative tellurium resistance protein terY 3239703 - 3239065 - | putative tellurium resistance protein TERM 3527 3240596 - 3240606 + G 70 -2.4 -5.04987 | overlap 3240576 3240602 ATGTGCGCTTATCTG CGCC CTC GGCC TTTTTTAGCCGTATT TERM 3528 3240855 - 3240843 - g 73 -9.1 -3.6959 | overlap 3240845 ACAGCAGGATTTAAA CAGCG GCA CGCTG GCGCTAAACGTCGTG fhaC3 3240418 - 3242106 + | putative hemolysin activator protein TERM 3529 3243423 - 3243396 - g 75 -9 -3.83205 | overlap 3243397 ACCCTTGATATTAAA GCCCGTGGGCAG CTAA CCGCCCAAGGGA AAAATATTAGCGGCA TERM 3530 3243422 - 3243397 - g 78 -12.5 -2.89602 | overlap 3243396 CCCTTGATATTAAAG CCCGTGGGCAG CTAA CCGCCCAAGGG AAAAATATTAGCGGC TERM 3531 3246668 - 3246653 - g 70 -2.4 -4.91712 | overlap 3246655 3246663 TGCAACGGATAAAAA CGGCAC ACTA GCGCTG TTGGCACCGGTAATT TERM 3532 3246968 - 3246953 - g 79 -8.2 -4.4009 | CTGGACGGCAGAAAA CCCCGA TATT CCGGGG GGGCGTTATACTCAA TERM 3533 3247424 - 3247394 - g 80 -9.6 -4.07133 | TACGGTGATAAACAA TGGGGCAGCACCCG GCG CGATTGTCGCCCCA CGTGATCGCGACAGC TERM 3534 3248998 - 3248982 - g 78 -3.6 -5.14965 | overlap 3248983 3248984 ACCGGGACTAAAAAA GGGCTG CTCTC CAGCAC CACCACCCGCAGCGA TERM 3535 3251290 - 3251308 + G 74 -9.5 -3.55444 | opp_overlap 3251289 CACTGAGTACATTAG CCGCCGG GCTGG CCGGTGG TTTGACAGGTGACAG fhaB2 3242151 - 3252038 + | putative adhesin YP_2920 3252035 - 3252268 + | hypothetical protein YP_2921 3252534 - 3252761 + | hypothetical protein YP_2922 3252842 - 3253273 + | hypothetical protein fhaB3 3253306 - 3254061 + | putative hemagglutinin/hemolysin yapF 3256842 - 3254557 - | putative autotransporter protein YP_2925 3257897 - 3256902 - | hypothetical protein YP_2926 3259378 - 3257999 - | hypothetical protein TERM 3536 3258740 - 3258752 + g 82 -4.1 -5.24129 | ATCAACGAAGTAGCC CAGTG ACG CATTG TTTTTTGTCGACCAA TERM 3537 3259824 - 3259848 + G 71 -11.5 -2.79023 | opp_overlap 3259834, overlap 3259822 GTTGGCCCCTCTGGC TGCGCAAAATC AAC GATGTTGCGCA TGATTGCTGGCCTTG YP_2927 3259701 - 3260819 + | putative transporter ATP-binding protein TERM 3538 3261618 - 3261651 + G 76 -8.1 -4.26792 | overlap 3261620 3261648 ACAGCTACAGCCAGT CACGCTGTCCGCG GGTGACAG CGCAGACAGCGTA TTTTACGGTTTCTAT TERM 3539 3261620 - 3261649 + G 80 -10.7 -3.72407 | overlap 3261618 3261648 AGCTACAGCCAGTCA CGCTGTCCGCG GGTGACAG CGCAGACAGCG TATTTTACGGTTTCT YP_2928 3260902 - 3264255 + | hypothetical protein TERM 3540 3264328 - 3264312 - f 72 -6.5 -4.36914 | opp_overlap 3264312 TGTGGCGCTACAAAA GCCTGAG TGG CTCATGC TATAGTAAATTCCTT purR10 3264364 - 3265350 + | LacI-family regulatory protein TERM 3541 3266613 - 3266600 - g 70 -8.1 -3.66095 | AAAGTGGTACTGAAA GGGGA AATA TCCCC GGAACAAGCGGTTGC ugpB4 3265391 - 3266671 + | putative sugar binding protein malF5 3266725 - 3267606 + | putative permease protein TERM 3542 3268124 - 3268137 + G 80 -2.3 -5.42259 | overlap 3268125 3268135 CAGGATCGATGGCGC AGGTG AATT CACCA TTTTTTTCAAGGTGG malG5 3267606 - 3268424 + | putative permease TERM 3543 3268781 - 3268797 + G 77 -12.3 -3.10164 | opp_overlap 3268771 3268768 ATTGATACCCGCTTC GTTGCCG AAG CGGCAAC TTGCCTGCTGGCTCG YP_2933 3268421 - 3268936 + | hypothetical protein TERM 3544 3269707 - 3269720 + G 70 -4.5 -4.70879 | overlap 3269708 GAGGCAGGCGTTGGC TCGGT GATG ACCGG TTTTTGCGATTTCGG TERM 3545 3270308 - 3270286 - g 70 -9.9 -3.18383 | gap 1 ATGTCGATCTATCAA TCCCTCTGCG CTAT CGCAG-GGGA GGTTAAGGTGATCAC bglX2 3268987 - 3271170 + | putative glycosyl hydrolase cyaE 3272760 - 3271234 - | hypothetical protein YP_2936 3274534 - 3272765 - | hypothetical protein TERM 3546 3274548 - 3274534 - R 71 -10 -2.62616 | GGATGCCGTATATCA TGGCGA TCA TCGCCA TCAATGCACATAGCA emrK1 3275699 - 3274650 - | multidrug resistance protein MdtN YP_2938 3276044 - 3275709 - | hypothetical protein TERM 3547 3275949 - 3275978 + g 71 -6.3 -4.39287 | opp_overlap 3275949 CGCTATAGCCGATAA CAGGATCAATGGC CCAC GCCATAGCGCCTG TTTTGCTGTCGTTAA YP_2939 3276241 - 3276041 - | hypothetical protein TERM 3548 3277098 - 3277082 - g 80 -2.2 -5.44721 | opp_overlap 3277082 AGCAGTGTAAAAAAA GCGG ATGTTGGTA CCGC TGTATTGGATCTCAT avtA2 3277007 - 3278239 + | putative aminotransferase TERM 3549 3278282 - 3278292 + G 78 -2.4 -5.25699 | opp_overlap 3278273 3278272 AAATATGGCATTACT GCCG ATG CTGC TTTTTATTGTGTCGT nhaC 3278232 - 3279683 + | hypothetical protein YP_2942 3279687 - 3280133 + | hypothetical protein TERM 3550 3280478 - 3280468 - g 72 -4 -4.7497 | CTTATCCATGAAAAA TCTT GGG AAGA ACGTGATTTTATCAT YP_2943 3280267 - 3280890 + | hypothetical protein tdcF3 3280906 - 3281286 + | putative translational inhibitor protein TERM 3551 3281607 - 3281623 + G 73 -2.9 -4.91511 | CCCGAGACGATGTAC CCCAGTG TGC CATTCGG TTTTTCTCATGCGGT TERM 3552 3281844 - 3281869 + G 78 -6.1 -4.82901 | TCACCGGCGAATTTG GCCGCAATTTG CGCA CAAATCGGGGC TTTTTATGAGGGCGC tdcF4 3281571 - 3281975 + | putative translational inhibitor protein YP_2946 3282492 - 3282190 - | hypothetical protein YP_2947 3283354 - 3282752 - | hypothetical protein lysR18 3283630 - 3284562 + | LysR family regulatory protein TERM 3553 3285564 - 3285579 + T 74 -4 -5.00616 | TGTGCCAGATTTTGT TTGAGT TGCT GCTCAA TTTTTTGCACAGAAA YP_2950 3286078 - 3285878 - | hypothetical protein YP_2951 3286212 - 3286466 + | hypothetical protein TERM 3554 3287807 - 3287776 - gf 75 -10.2 -2.78679 | opp_overlap 3287768, overlap 3287775 GCGTCCTAGCCAAAG GCGTTGTACCCGAT GGTT ATCAGGTACACCAC AAACTACCGCTAGAT YP_2952 3286599 - 3287981 + | hypothetical protein YP_2953 3287948 - 3288460 + | hypothetical protein YP_2954 3288481 - 3288942 + | hypothetical protein TERM 3555 3290337 - 3290358 + G 77 -10.1 -3.74693 | TTTATTATCGAGTTC GGTGACCGC CTGA GCGATCACC TTTAATACGGTGGCA YP_2956 3289155 - 3290363 + | transposase for the IS285 insertion element YP_2957 3290550 - 3290888 + | hypothetical protein TERM 3556 3291096 - 3291126 + T 100 -9.8 -4.93877 | opp_overlap 3291099, overlap 3291099 TATCCCAGAAATAAC AAAGGAGTTACGCT ATT AACGTAACTCCTTG TTTTATTTGGTGGCC TERM 3557 3291099 - 3291123 + T 100 -11.5 -4.56436 | opp_overlap 3291099, overlap 3291096 CCCAGAAATAACAAA GGAGTTACGCT ATT AACGTAACTCC TTGTTTTATTTGGTG TERM 3558 3291123 - 3291099 - T 100 -13.7 -4.63048 | opp_overlap 3291099 3291096 CCCAGAAATAACAAA GGAGTTACGCT ATT AACGTAACTCC TTGTTTTATTTGGTG TERM 3559 3291383 - 3291359 - T 100 -8.6 -5.90981 | opp_overlap 3291349 3291359 TTATAGGAAAAAAAA TCCCGACACA AATAA TATGCCGGGA TTTTTATTACTTCAC TERM 3560 3291359 - 3291383 + T 78 -4.2 -5.1963 | opp_overlap 3291359, overlap 3291349 TTATAGGAAAAAAAA TCCCGACACA AATAA TATGCCGGGA TTTTTATTACTTCAC rpoD 3293301 - 3291406 - | RNA polymerase sigma factor RpoD TERM 3561 3292509 - 3292534 + g 80 -3.1 -5.24551 | overlap 3292510 GCTTCAGAATTTCAG CGGCAGCATTC GCGT GATTGCGGCCA TTTTTCTTGATTTCC TERM 3562 3293354 - 3293373 + r 81 -9.3 -3.87869 | GCTATAGCGGCATAT TGTGGGG AGTTGC CCCCACA TTTATCGGCAATTAA dnaG 3295150 - 3293402 - | DNA primase TERM 3563 3293560 - 3293550 - G 74 -6.8 -4.37092 | overlap 3293552 AGCGTGTCGACAAAA GTCG GTT CGAC CATATCCTCTACAAT TERM 3564 3295185 - 3295212 + r 76 -11.2 -2.55668 | opp_overlap 3295185, overlap 3295184 CATAAACGAGAACAA GCCGCGCATTCC TTTC GGAAAGCACGGC CTTCGTATGCAACTA TERM 3565 3295212 - 3295185 - R 100 -13.4 -3.94823 | opp_overlap 3295185 3295184 CATAAACGAGAACAA GCCGCGCATTCC TTTC GGAAAGCACGGC CTTCGTATGCAACTA rpsU 3295501 - 3295286 - | 30S ribosomal protein S21 TERM 3566 3296882 - 3296896 + G 70 -9.2 -3.551 | TTGAGTGTGTCGGTG CGGCCG CGG TGGCCG TTATCTGAGTTACCA gcp 3295907 - 3296920 + | O-sialoglycoprotein endopeptidase TERM 3567 3296937 - 3296962 + T 100 -12.6 -3.47841 | overlap 3296929 CAGAATGGCTGAGCG TGGCTGCGGC TGCGTT GCCGCAGTCA TTCTGATATGGGTGT TERM 3568 3296985 - 3297024 + T 100 -12.1 -4.07885 | overlap 3296992 ATGGGTGTCGAATGG CTGGGCGTGGCTGTGGC TGTGTT GCCGCAGCCATTCTCGG TTTTGGGGAAAACTA TERM 3569 3296992 - 3297017 + T 100 -12.6 -3.52113 | overlap 3296985 TCGAATGGCTGGGCG TGGCTGTGGC TGTGTT GCCGCAGCCA TTCTCGGTTTTGGGG YP_2962 3297687 - 3297037 - | putative glycerol-3-phosphate acyltransferase PlsY folB 3297879 - 3298154 + | dihydroneopterin aldolase TERM 3570 3298364 - 3298386 + F 100 -8.4 -5.77632 | opp_overlap 3298364 AAATTCTAAATAGAA CGGCACTGTT TTC AGCATTGCCG TTTTTTTGTGGTTTT uppP 3298428 - 3299246 + | undecaprenyl pyrophosphate phosphatase TERM 3571 3299463 - 3299445 - T 75 -8.8 -3.58343 | opp_overlap 3299425 GGCAGGAGTCTGAAA CCCCTTGT TTT ACAGGGGG AAACGAACAGGGAGT cca 3300720 - 3299482 - | multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase TERM 3572 3300312 - 3300290 - G 100 -12.7 -4.21275 | overlap 3300301 CCAAGGTAGGCAAAA CGGGCGGCA AAGCG TGCCACCCG CAGAACGCGCAATGG YP_2966 3301503 - 3300880 - | putative signal transduction protein TERM 3573 3302589 - 3302605 + G 73 -5.1 -4.64657 | overlap 3302578 3302591 CGCTTTGGCTATGGT TCGCCAA TCG TTGGCTA TTTTTGGCGGTTTGG YP_2967 3301807 - 3303114 + | hypothetical protein TERM 3574 3305753 - 3305713 - g 82 -11.2 -3.73224 | gap 1 CTATTCGCCAGCAAA TTCTCTGCCGCCACCGCGA AGAT CCGCAGTTGCAGCAG-GAA GTCCGCGAAATGCGG glnE 3303285 - 3306140 + | bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase TERM 3575 3306465 - 3306478 + G 70 -9.5 -3.18681 | ATATTGCCTCCCTTG GCGCG GTTG CGCGC TTAGTCGGGTTGACC rfaE 3306260 - 3307705 + | bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase TERM 3576 3307727 - 3307710 - f 86 -12.7 -2.52464 | GCCGCGGCTAAGTCA GCGCCAG AGCG CTGGCGC ATAAGGATGTGGCAG TERM 3577 3307799 - 3307817 + G 76 -5.2 -4.8048 | overlap 3307800 GGGTTGTTATCCACT TCCCTGTT GGG GACGGGGG TTTTTGCTGTGCCAG asoB 3307736 - 3308992 + | inner membrane protein YjeH TERM 3578 3309112 - 3309138 + T 72 -10.1 -2.88849 | gap 1, opp_overlap 3309101, overlap 3309107 3309113 ACATCCATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCTCTGCC TERM 3579 3309113 - 3309139 + T 84 -10.1 -3.82218 | gap 1, opp_overlap 3309101, overlap 3309107 3309112 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCTCTGCCT YP_2971 3309598 - 3309317 - | hypothetical protein YP_2972 3310116 - 3309634 - | hypothetical protein ribB 3310167 - 3310820 + | 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_2974 3311279 - 3312061 + | hypothetical protein TERM 3580 3312307 - 3312343 + T 74 -10.3 -2.57564 | opp_overlap 3312316, overlap 3312306 3312311 3312315 GGCAATGACTTTGGG TATGGTAAAGGAAGGTG CAT TGCCTTCCCTTACTATA ATTATCCCAAAATAA gsp 3313505 - 3312345 - | hypothetical protein TERM 3581 3313519 - 3313540 + r 73 -7.3 -4.23723 | gap 1 ATTAATCAGCCTTAG CCACC-CATG CTA CGTGTGGTGG TTTTGGATGATGTTG YP_2976 3314201 - 3313515 - | hypothetical protein YP_2977 3314267 - 3314437 + | hypothetical protein TERM 3582 3314469 - 3314435 - T 100 -10.6 -5.09895 | overlap 3314439 GAGGGAGGCAAAAAA TAAACCGGGCGCAGCC AAT GACTGTGCCCGGTGAA GCCAAACCGCTGACG TERM 3583 3314465 - 3314439 - T 100 -15.8 -5.0666 | overlap 3314435 GAGGCAAAAAATAAA CCGGGCGCAGCC AAT GACTGTGCCCGG TGAAGCCAAACCGCT tolC 3315899 - 3314502 - | outer membrane channel protein TERM 3584 3315284 - 3315269 - G 74 -6.8 -4.30987 | opp_overlap 3315282 ATTCGGGATAATAAA CACCAG TAAT CTGGCG CAAGCTCTCTAGTGC nudF 3316295 - 3316927 + | ADP-ribose pyrophosphatase NudF YP_2980 3316961 - 3317386 + | hypothetical protein icc 3317468 - 3318295 + | cyclic 3',5'-adenosine monophosphate phosphodiesterase YP_2982 3318292 - 3318876 + | esterase YqiA TERM 3585 3320187 - 3320151 - g 90 -8 -5.00616 | opp_overlap 3320151 3320150, overlap 3320155 GTGGTGCGTAAAAAA CTGACCAG-TGGCCCGGC ACT GCCTGGCAAACTGG-CAG ATTGTACTTCGCAGG parE 3318978 - 3320873 + | DNA topoisomerase IV subunit B lysR19 3320877 - 3321788 + | LysR family regulatory protein TERM 3586 3321839 - 3321813 - T 100 -17.3 -4.4715 | GGGTAACGTATAAAA CGGCCCTCCCC AGAGA GAGGAGGGCCG AACCGCTTAGCTGTT mdaB3 3322430 - 3321846 - | putative modulator of drug activity YP_2986 3322751 - 3322503 - | hypothetical protein TERM 3587 3322959 - 3322932 - gH 84 -4.8 -5.22039 | gap 1, overlap 3322933 GCTAAATTCAAAAAA TCAGCCCGT-ACC GTG GGTGACGTGCTGG GTAAATATCATCCGC TERM 3588 3322958 - 3322933 - gH 73 -8.3 -3.72139 | gap 1, overlap 3322932 CTAAATTCAAAAAAT CAGCCCGT-ACC GTG GGTGACGTGCTG GGTAAATATCATCCG TERM 3589 3323523 - 3323487 - gH 95 -8 -5.00616 | gap 1, overlap 3323490 3323492 GCGGTGTGGAAAAAA GAAGATGGCAGCGCCGT GATC ACGGCGTTACCA-CATC AGGTTTCCGGCGCGA TERM 3590 3323520 - 3323490 - gH 91 -8.3 -4.61482 | gap 1, overlap 3323487 3323492 GTGTGGAAAAAAGAA GATGGCAGCGCCGT GATC ACGGCGTTACCA-C ATCAGGTTTCCGGCG TERM 3591 3323519 - 3323492 - gH 100 -12 -3.91465 | overlap 3323490 3323487 GTGGAAAAAAGAAGA TGGCAGCGCCGT GATC ACGGCGTTACCA CATCAGGTTTCCGGC TERM 3592 3323947 - 3323962 + GH 74 -4.6 -4.81249 | opp_overlap 3323947 3323946 AAGATGATCCTAAAC CGCTAC TGAT GCAGCG TTTTTCCATTTCGGA parC 3322734 - 3325007 + | DNA topoisomerase IV subunit A TERM 3593 3325731 - 3325708 - g 73 -3.2 -5.04987 | AACAGGTGCAAAAAA GAAACATC TCTATTTG GATGTTCC CAGAAGGCACACGCA plsC2 3325296 - 3326027 + | putative acyltransferase TERM 3594 3326062 - 3326072 + F 75 -8.2 -3.89695 | overlap 3326055 CAGGCTATCGCGGCC CCGC GCG GCGG TTATATTTATCGCCA TERM 3595 3326339 - 3326350 + G 100 -7.2 -5.47399 | TATTAGAATCTCGCC GCGG CCAA CCGC TTTTTTTAACCTTGC sufI2 3326206 - 3327630 + | repressor protein for FtsI TERM 3596 3327761 - 3327773 + T 78 -9.1 -3.83409 | CGCATGTCTCGCTTG CCTGC TTC GCAGG TTTACTGATATGTAC TERM 3597 3328599 - 3328575 - T 70 -5.8 -4.36914 | CTGCGGGTGAGAAAA TTACGGATAT TCAGG ATGTCCGTAA CACCGTTGTGATGCG TERM 3598 3330300 - 3330270 - T 86 -7.7 -4.71061 | gap 1 ATCCAGAGGGAAAAA CAGGC-AGCATTAA GGGG TTATTGCTGGCCTG AAATCAGCGGTCAGA dkgA 3331137 - 3330304 - | 2,5-diketo-D-gluconate reductase A TERM 3599 3331182 - 3331207 + H 71 -3.4 -4.99645 | overlap 3331176 GTATTAGCCCGTTGC TGATAACG TAAGTTTAGT CGTTATCA TTTTATTTATGACCT YP_2992 3331284 - 3331493 + | hypothetical protein TERM 3600 3331472 - 3331502 + T 93 -9.7 -4.2558 | opp_overlap 3331469 GTATAAACAGGAGGA CTGGCAGCATGAC ATGCG GTAATGCCGCCAG TTTTGGTACGAGATA TERM 3601 3331563 - 3331553 - T 76 -6.8 -4.55721 | AAATCTTACATAAAA CGGT TAT ACCG CCGCTTCATAGATAC YP_2993 3332713 - 3331556 - | putative iron-containing alcohol dehydrogenase TERM 3602 3332620 - 3332637 + g 71 -6.9 -4.21631 | opp_overlap 3332618 3332620 CGTAGGTAATCAATA TCCGGGC ATCC GCCGGGA TTTCTTGAGTCAATT TERM 3603 3332812 - 3332824 + H 80 -4.8 -5.17353 | CGTAACCACATCACT GTGC CTGGA GCAC TTTTTTCGTCAATAT araC6 3333111 - 3334004 + | AraC family transcription regulator TERM 3604 3334049 - 3334065 + T 75 -5.8 -4.65916 | opp_overlap 3334049 AAGGCTTCATAGAAA CGGCGT ATTAG ATGCCG TTTTATTCACCTGGA dedA3 3334758 - 3334096 - | DedA family membrane protein metC3 3336162 - 3334951 - | cystathionine beta-lyase TERM 3605 3335994 - 3336018 + g 86 -5 -5.2696 | gap 1, overlap 3335997 CATAGAACAACTCAC CATTGCCCCGA TTGA TCGTGGCA-TG TTTTTTCGCTTTTAC TERM 3606 3335997 - 3336016 + g 74 -7.8 -4.24654 | overlap 3335994 AGAACAACTCACCAT TGCCCCGA TTGA TCGTGGCA TGTTTTTTCGCTTTT exbB 3336617 - 3337678 + | TonB complex protein exbD 3337682 - 3338113 + | biopolymer transport protein ExbD TERM 3607 3338114 - 3338154 + T 93 -9.7 -4.32046 | opp_overlap 3338114 3338115, overlap 3338115 AGCGGCGCAAAATAA TTTTTTGCAAGCGCGGTTA CTG TTACCGCGCTTGCATCAAC TTTGGTTTTTGAGGA TERM 3608 3338154 - 3338114 - T 88 -9.7 -4.17316 | opp_overlap 3338114 3338115, overlap 3338115 AGCGGCGCAAAATAA TTTTTTGCAAGCGCGGTTA CTG TTACCGCGCTTGCATCAAC TTTGGTTTTTGAGGA TERM 3609 3338115 - 3338153 + T 95 -13.2 -3.18505 | opp_overlap 3338114 3338115, overlap 3338114 GCGGCGCAAAATAAT TTTTTGCAAGCGCGGTTA CTG TTACCGCGCTTGCATCAA CTTTGGTTTTTGAGG TERM 3610 3338153 - 3338115 - T 95 -13.2 -3.09908 | opp_overlap 3338115 3338114, overlap 3338114 GCGGCGCAAAATAAT TTTTTGCAAGCGCGGTTA CTG TTACCGCGCTTGCATCAA CTTTGGTTTTTGAGG YP_2999 3339766 - 3338210 - | hypothetical protein TERM 3611 3339742 - 3339722 - G 87 -4.8 -5.45652 | overlap 3339723 ATTTTTAATAAAAAA CTCATACT TCTCT AGTATGAA AGTTATCATTGTTTT YP_3000 3340363 - 3339791 - | hypothetical protein YP_3001 3340820 - 3340347 - | hypothetical protein nrfG5 3341587 - 3340817 - | TPR repeat-containing protein TERM 3612 3341559 - 3341545 - G 80 -4.3 -5.0916 | CGCTTAACAGAAAAA TCATC ACTGG GATGA TAATAATAGTATTAA YP_3003 3342404 - 3341571 - | hypothetical protein TERM 3613 3341780 - 3341803 + g 86 -8.2 -4.67563 | opp_overlap 3341780 3341779 3341777, overlap 3341779 AGCCAAAACTAATAC TGTATTGCAG TGTG CTGCAAAACA TTTTCATTTCTATTG YP_3004 3343276 - 3342401 - | hypothetical protein YP_3005 3344559 - 3343273 - | putative type II secretion protein YP_3006 3345803 - 3344571 - | hypothetical protein TERM 3614 3345150 - 3345179 + g 100 -4.3 -5.96894 | overlap 3345152 GAGATCTTGCGAGCC TTGATTGCCTTGT AATA ACAAGGTAGGCGA TTTTTTTATTTGGGT TERM 3615 3346371 - 3346354 - R 71 -9.1 -3.34895 | CGTATGCGTAATGAA GGGTAGG AGTC CCCACCC CTAAGATTAAATACC TERM 3616 3346797 - 3346811 + r 80 -10 -3.57418 | opp_overlap 3346796 3346795 ATTTTATTAATAACC CCCTGA TAC TCAGGG TTGCTTTGATAACTC YP_3008 3348177 - 3347311 - | hypothetical protein pppA2 3348651 - 3348229 - | hypothetical protein TERM 3617 3348273 - 3348288 + g 73 -5.4 -4.70659 | gap 1 CAGTGATAGCAACGG CGTAGGG AAC CCC-ACG TTTTTGGATATCAAC TERM 3618 3348703 - 3348677 - H 81 -9.5 -3.8594 | opp_overlap 3348679, overlap 3348679 AATAGTGAGATGAAA GATATGGCAGC AGATG GCTGCCATATT TATTGTGCCCAGAAA TERM 3619 3348701 - 3348679 - H 91 -12.1 -3.51034 | opp_overlap 3348679, overlap 3348677 TAGTGAGATGAAAGA TATGGCAGC AGATG GCTGCCATA TTTATTGTGCCCAGA TERM 3620 3348679 - 3348701 + H 100 -12.1 -4.30719 | opp_overlap 3348679 3348677 TAGTGAGATGAAAGA TATGGCAGC AGATG GCTGCCATA TTTATTGTGCCCAGA TERM 3621 3348738 - 3348720 - H 100 -16 -4.37092 | opp_overlap 3348720 ATTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC TERM 3622 3348720 - 3348738 + H 100 -16 -3.07307 | opp_overlap 3348720 ATTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC tnp_34 3348800 - 3349309 + | transposase for the IS1541 insertion element TERM 3623 3349387 - 3349411 + F 93 -9.9 -4.38927 | opp_overlap 3349390, overlap 3349389 3349390 ATAGGCGCATATGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTCTATGAAAA TERM 3624 3349389 - 3349409 + F 100 -12.5 -3.79864 | opp_overlap 3349390, overlap 3349387 3349390 AGGCGCATATGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTCTATGAA TERM 3625 3349390 - 3349408 + F 100 -16 -2.87195 | opp_overlap 3349390, overlap 3349389 3349387 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTCTATGA TERM 3626 3349408 - 3349390 - f 100 -16 -4.8048 | opp_overlap 3349390 3349389 3349387 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTCTATGA TERM 3627 3352377 - 3352355 - g 74 -4.1 -4.93316 | GAACAACAGCAAAAA GTCACCACC CCGTT AGTGGCAAC GCCACCAGTTCAGCG fimC6 3352157 - 3352876 + | fimbrial chaperone protein TERM 3628 3353355 - 3353343 - g 73 -6.3 -4.5448 | CAGGGACAAAAATAA CGATT GCT AATCG AGTCACGGTCCAACT YP_3013 3352901 - 3354007 + | fimbrial protein TERM 3629 3354190 - 3354207 + T 71 -4.1 -4.87786 | TGTCAATAACCTCAA GCGAC CAATAAGT GTCGC TTTTTATGCCGTTAG fepB 3355298 - 3354219 - | iron-enterobactin transporter periplasmic binding protein TERM 3630 3356169 - 3356179 + G 91 -3.2 -5.72616 | ATGAATATTCTTTCC CTAC GCG GTGG TTTTTTTCTGTGGAT YP_3015 3356154 - 3357149 + | hypothetical protein TERM 3631 3357215 - 3357180 - T 100 -12 -4.39426 | opp_overlap 3357177 3357176 TACAGGGCCATAAAA TCGCCACAGTAATC TCATACTC GCTTACTGTGGCGA TCCCTCTTCTTCCGT YP_3016 3357819 - 3357241 - | hypothetical protein TERM 3632 3358938 - 3358952 + r 84 -10 -3.74178 | overlap 3358930 3358932 3358946 TCGCACGCCGCGTAG CCGTTG GTT CAACGG TTTACCCTTTGATTC flhB 3361212 - 3360079 - | flagellar biosynthesis protein FlhB TERM 3633 3360540 - 3360557 + g 73 -2.7 -4.94243 | TTTTATGCTCTTGTT TGACC TCCTGTTT GGTCA TTTTCATTTTTTTGG TERM 3634 3361169 - 3361179 + g 74 -4.6 -4.76312 | overlap 3361162 3361159 GCTTTCGACAGCTTC CCCG CTG TGGG TTTTTCACTCTTCTC fliR3 3361985 - 3361212 - | flagellar biosynthetic protein FliR fliQ3 3362264 - 3361992 - | flagellar biosynthesis/type III secretory pathway protein fliP 3363036 - 3362266 - | flagellar biosynthesis protein FliP fliN2 3363446 - 3363033 - | flagellar switch protein TERM 3635 3363077 - 3363089 + g 70 -3.4 -4.90266 | opp_overlap 3363077 TATTGATGTTAATAA TACG CAGGC CGTA TTTTTCATTAATCAC fliM 3364338 - 3363439 - | flagellar motor switch protein TERM 3636 3363680 - 3363700 + g 88 -3.9 -5.67967 | ACTAAGTGTTCAAGT TGCCTCTCT GAC AGTGAGACA TTTTTTTCTACTGCT TERM 3637 3363915 - 3363928 + g 76 -3.1 -5.1361 | AGAGATCGGTTATTT CAAGC CCGA GTTTG TTTTTTAGCCTTTCT TERM 3638 3365444 - 3365460 + G 74 -7.3 -4.258 | GGCCAGAGGATATTC TGCCTTT GGT GAAGGCA TTTATTAATAAGTAC atoC3 3364861 - 3365889 + | sigma-54 transcriptional regulatory protein fliE2 3365906 - 3366286 + | flagellar hook-basal body complex protein FliE fliF 3366296 - 3367936 + | flagellar MS-ring protein fliG 3367908 - 3368951 + | flagellar motor switch protein G TERM 3639 3368988 - 3368970 - g 82 -3.8 -5.252 | overlap 3368972 GATGTTGATAAAAAA TACCCC ACGGGCG GGGGCA GTGAAACTGCGGGTT TERM 3640 3369634 - 3369644 + G 73 -3.2 -5.00616 | CAATGCATTGGTGCG TTGC ACA GCAG TTTTTTGACGGAACC fliH 3368929 - 3369672 + | flagellar assembly protein H TERM 3641 3369719 - 3369739 + G 77 -11.8 -3.15544 | opp_overlap 3369715 ATCGAAAACATTCAT CTGGCCCG AGTGG CGGGCCGG TTAGTGCGAGTGACG fliI 3369665 - 3371005 + | flagellum-specific ATP synthase nlpD4 3371009 - 3371446 + | hypothetical protein TERM 3642 3371506 - 3371477 - T 100 -13.7 -5.67063 | opp_overlap 3371477 GCGACCATAAAAAAA TCCGTCATAGGGA ATAT TCTCTATGACGGA TTTTTTATTGGGTGG TERM 3643 3371477 - 3371506 + T 100 -15.9 -5.4833 | opp_overlap 3371477 GCGACCATAAAAAAA TCCGTCATAGGGA ATAT TCTCTATGACGGA TTTTTTATTGGGTGG YP_3031 3372199 - 3371774 - | hypothetical protein YP_3032 3372472 - 3372206 - | putative flagellar regulatory protein flgA 3373414 - 3372701 - | flagellar basal body P-ring biosynthesis protein FlgA TERM 3644 3372762 - 3372779 + g 76 -3.3 -5.17576 | overlap 3372763 ACCGTGGCGGTCACC ACTCGGC CACT GCTGAGG TTTTTTACCTTGATA flgB 3373607 - 3374053 + | flagellar basal body rod protein FlgB flgC 3374056 - 3374481 + | flagellar basal body rod protein FlgC flgD 3374484 - 3375140 + | flagellar basal body rod modification protein TERM 3645 3375552 - 3375568 + G 70 -11.5 -2.62184 | opp_overlap 3375543 AAATTACAGGGCTAC CCGGCGG ATG CTGCCGG TAATATCCAGGCGGG flgE 3375195 - 3376436 + | flagellar hook protein FlgE TERM 3646 3376697 - 3376687 - g 71 -5.4 -4.57073 | TATTGCCCTTAAAAA TCAG GGG CTGA TCGCGGTGCTCAGTG TERM 3647 3376983 - 3376957 - g 76 -5.9 -4.73105 | gap 1 ACTCAGAAAAAACAA CCGCGGTTTACT GGTC AGTAA-CCGTGG CCCGGCGGCCCGTGA flgF 3376436 - 3377167 + | flagellar basal body rod protein FlgF flgG 3377235 - 3378020 + | flagellar basal body rod protein FlgG TERM 3648 3378536 - 3378520 - g 79 -7.3 -4.56775 | ATCCGTGGCGAAAAA TGGCTGA CCC TCAACCA AGGCGATGAATATAT flgH 3378055 - 3378720 + | flagellar basal body L-ring protein TERM 3649 3379488 - 3379516 + G 71 -6.6 -4.14541 | gap 1, opp_overlap 3379498 ACGTTATGGTCAATG CGCCACAAGACGC CGGT GCG-CGCGTGGCG TTTATGTCATTGCTG flgI 3378734 - 3379909 + | flagellar basal body P-ring protein TERM 3650 3379963 - 3379940 - g 74 -7.4 -4.26871 | gap 1, opp_overlap 3379942 3379943, overlap 3379941 3379943 GAAGCCATTAATAAA TCATCCCCGGT GAT ACCGGGGA-GT TTTGTCGGTGACCTC TERM 3651 3379962 - 3379941 - g 71 -10.9 -3.154 | gap 1, opp_overlap 3379942 3379943, overlap 3379940 3379943 AAGCCATTAATAAAT CATCCCCGGT GAT ACCGGGGA-G TTTTGTCGGTGACCT TERM 3652 3379942 - 3379962 + G 91 -11.1 -4.42653 | opp_overlap 3379941 3379940 3379943, overlap 3379943 AGCCATTAATAAATC ATCCCCGGT GAT ACCGGGGAG TTTTGTCGGTGACCT TERM 3653 3379943 - 3379961 + G 86 -14.6 -3.2511 | opp_overlap 3379941 3379940 3379943, overlap 3379942 GCCATTAATAAATCA TCCCCGGT GAT ACCGGGGA GTTTTGTCGGTGACC TERM 3654 3379961 - 3379943 - g 86 -14.6 -3.12942 | opp_overlap 3379943 3379942, overlap 3379941 3379940 GCCATTAATAAATCA TCCCCGGT GAT ACCGGGGA GTTTTGTCGGTGACC flgJ 3379919 - 3380212 + | peptidoglycan hydrolase flgK 3380325 - 3381686 + | flagellar hook-associated protein FlgK TERM 3655 3381927 - 3381894 - f 76 -9.5 -3.51058 | opp_overlap 3381895 3381897 3381898 3381900, overlap 3381902 ACAAGCAAACATCAA GCAGTACAGCAGTAC AGCA GTACAGCAGTACAGC AGTACAGCAGTAATA TERM 3656 3381898 - 3381939 + F 70 -10.1 -2.50338 | opp_overlap 3381894 3381902, overlap 3381897 3381895 3381900 GCAAACATCAAGCAG TACAGCAGTACAGCAGTAC AGCA GTACAGCAGTACAGCAGTA ATATTAGTGGGTTAT TERM 3657 3381935 - 3381902 - f 70 -9.5 -2.87404 | opp_overlap 3381900 3381898 3381897 3381895, overlap 3381894 ACATCAAGCAGTACA GCAGTACAGCAGTAC AGCA GTACAGCAGTACAGC AGTAATATTAGTGGG TERM 3658 3382521 - 3382508 - f 78 -2.4 -5.44721 | ATTACTGCAAAAAAA CCAT GAAGAG ATGG AGCTGTCGAATGCCA YP_3045 3382682 - 3383695 + | hypothetical protein TERM 3659 3383776 - 3383809 + T 82 -6 -5.00616 | gap 1, overlap 3383777 3383778 TACCCGTTATTCTTC AAGCTG-CATGTGCG TTGAT CGCACATGTCAGCCG TTTTTTCAGCCCCAG TERM 3660 3383777 - 3383808 + T 78 -9.5 -3.60048 | gap 1, overlap 3383776 3383778 ACCCGTTATTCTTCA AGCTG-CATGTGCG TTGAT CGCACATGTCAGCC GTTTTTTCAGCCCCA TERM 3661 3383778 - 3383807 + T 91 -13 -2.75708 | gap 1, overlap 3383777 3383776 CCCGTTATTCTTCAA GCTG-CATGTGCG TTGAT CGCACATGTCAGC CGTTTTTTCAGCCCC YP_3046 3384305 - 3383859 - | hypothetical protein YP_3047 3385332 - 3384286 - | putative regulatory protein TERM 3662 3385009 - 3384997 - G 71 -5.5 -4.43859 | GATAATTTCACAAAA GCTGG CAT CCAAC AGATAACCTATCTTG TERM 3663 3385803 - 3385787 - H 72 -7.3 -3.99805 | opp_overlap 3385787, overlap 3385792 3385796 TCTTAAAAATTTAAA GCAGATT AAT AACCTGC GTTATTAAAATACTA TERM 3664 3387203 - 3387227 + H 73 -5.8 -4.41844 | gap 1, opp_overlap 3387205, overlap 3387205 GCCATGAACTTAATC GA-TACCGCTT TTCG GAGCGGTATTC TTTTATCAACGTTTT TERM 3665 3387205 - 3387224 + H 82 -8.6 -4.31397 | opp_overlap 3387205, overlap 3387203 CATGAACTTAATCGA TACCGCTT TTCG GAGCGGTA TTCTTTTATCAACGT fliD2 3387379 - 3388656 + | putative flagellar hook-associated protein fliS2 3388666 - 3389046 + | flagellar protein FliS YP_3051 3389048 - 3389374 + | hypothetical protein fliK2 3389376 - 3390515 + | putative flagellar hook-length control protein TERM 3666 3390590 - 3390572 - g 86 -9 -4.51224 | overlap 3390568 AAGACTAAGAAGAAA GTATTTTC GCC GAAAATAC GGGCATTCCTATTGC YP_3053 3390551 - 3391024 + | putative flagellar biogenesis protein fliA2 3391030 - 3391725 + | flagellar biosynthesis sigma factor TERM 3667 3391963 - 3391983 + G 75 -9.1 -3.90761 | opp_overlap 3391952, overlap 3391950 3391966 TATACGGTTGAGTTT CAACAGCAA TTA TTGTTGTTG TTGTTGTATGAATTG motA2 3391741 - 3392610 + | flagellar motor protein MotA TERM 3668 3393137 - 3393148 + G 73 -5.8 -4.5123 | overlap 3393123 CCAGCGCAGTAGTGC GGTG TTAA CACC TTTCTTTAGTCGGTT motB2 3392610 - 3393521 + | hypothetical protein TERM 3669 3393736 - 3393750 + G 78 -6.4 -4.80455 | opp_overlap 3393736 CGTGTCAATTTTAAA TCGGTT TCT GACCGA TTTTCTCTTTCGCTG YP_3057 3393590 - 3393778 + | hypothetical protein TERM 3670 3394142 - 3394128 - g 80 -4.3 -5.18357 | CAACTCACCAAAAAA CAAGA CGTTT TCTTG GATGGCGAGAAAGTC TERM 3671 3394428 - 3394403 - g 82 -4.1 -5.35459 | gap 1, opp_overlap 3394403 3394401 3394405, overlap 3394405 AGACACGATAAAAAA TATTAC-TCTGC ATG GCAGAAGTAATG TGTCTTTCTTTATGG TERM 3672 3394426 - 3394405 - g 74 -6.7 -4.30057 | gap 1, opp_overlap 3394403 3394401 3394405, overlap 3394403 ACACGATAAAAAATA TTAC-TCTGC ATG GCAGAAGTAA TGTGTCTTTCTTTAT YP_3058 3393981 - 3394577 + | hypothetical protein TERM 3673 3394968 - 3394982 + G 87 -4.4 -5.49579 | opp_overlap 3394968 ACATTATATCAACAG TAATAA GTT TTATTA TTTTATTTTTTCTGA YP_3059 3394574 - 3395029 + | hypothetical protein TERM 3674 3395107 - 3395130 + G 74 -9.7 -3.6393 | opp_overlap 3395103, overlap 3395085 3395105 GATTACAATATGTGA GCATTGTCT TATTTC AGACAATGC TATTTCTCTGCTACG TERM 3675 3395284 - 3395300 + G 74 -6.5 -4.31837 | ATGATGCCGGATACT CAGCCTT CGT ATGGCTG TTTGTTCCCTTTCTT YP_3060 3395013 - 3395384 + | hypothetical protein TERM 3676 3395997 - 3395987 - T 70 -5.4 -4.49316 | opp_overlap 3395987, overlap 3395983 AGCAGCAAGAATAAA TGGT TTA ACCA TGGTGTAGCCCCTTT YP_3062 3396550 - 3396248 - | hypothetical protein TERM 3677 3396311 - 3396338 + g 100 -7.2 -5.78622 | opp_overlap 3396311 TAGTAATATACTTAA CAGATTCAAAAA TTGA TTTTTAAATCTG TTTTTTTTCAAATAA TERM 3678 3396528 - 3396540 + g 91 -2.7 -5.73672 | CAAAAAATATAATAA CAATG TAC TATTG TTTTTTTCATTATTT TERM 3679 3396964 - 3396950 - H 95 -9.2 -4.46267 | opp_overlap 3396950 AGAAGGCAAGGAAAA CGGGCA GGA CGCCCG TTTTAGGCGTCACGC TERM 3680 3396950 - 3396964 + H 79 -8.5 -4.11216 | opp_overlap 3396950 AGAAGGCAAGGAAAA CGGGC AGGAC GCCCG TTTTAGGCGTCACGC TERM 3681 3397028 - 3396997 - H 76 -9.4 -3.54543 | gap 1, overlap 3397016 AGGGACCCGCGTAAA GCCGTCCGCCAGCCG AAA CGA-TGACGGAGGGC ATCCACGCAGTGGAC TERM 3682 3397094 - 3397140 + H 100 -15.4 -3.05384 | gap 1, opp_overlap 3397078 3397099, overlap 3397099 3397104 GGGTCACGCGCTGCA CTGAACC-CCAGATCTTGGAT CTTTTT ATCCATGATCTGGAGGTTCGG TTCAATGAAACACCC TERM 3683 3397134 - 3397099 - H 93 -12.7 -3.05463 | opp_overlap 3397094 3397099 3397104, overlap 3397078 ACGCGCTGCACTGAA CCCCAGATCTTGGAT CTTTTT ATCCATGATCTGGAG GTTCGGTTCAATGAA TERM 3684 3397099 - 3397135 + H 77 -10.3 -3.19192 | gap 1, opp_overlap 3397078 3397099, overlap 3397094 3397104 ACGCGCTGCACTGAA CC-CCAGATCTTGGAT CTTTTT ATCCATGATCTGGAGG TTCGGTTCAATGAAA TERM 3685 3397104 - 3397114 + H 75 -5.4 -4.88736 | opp_overlap 3397099, overlap 3397099 3397094 CTGCACTGAACCCCA GATC TTG GATC TTTTTATCCATGATC YP_3063 3397124 - 3397660 + | IS1661 DNA-binding protein TERM 3686 3398480 - 3398462 - g 71 -11 -2.73735 | overlap 3398452 3398450 3398473 AAACAGGCGGAATGA GTCCGGCA GAA TACCGGAC TCAGGTAGAAAAGCA tra5E 3397714 - 3398499 + | IS1661 transposase YP_3066 3400055 - 3399615 - | hypothetical protein YP_3067 3401543 - 3400062 - | hypothetical protein TERM 3687 3400385 - 3400399 + g 74 -8.6 -3.97406 | overlap 3400376 3400397 ACGGCAGTTGCGTGC CCAACT TGT AGTTGG TTTCTGCCATTTTCC TERM 3688 3400859 - 3400840 - G 70 -8.6 -3.80094 | GTCAAACCAAGATAA CGTGAATC TTCA GACTCACG CAGAGCACGCCATTT YP_3068 3402111 - 3401611 - | hypothetical protein TERM 3689 3401748 - 3401775 + g 79 -5.6 -5.01732 | CTAACGCTTCCCGTA GTTCCAGAATTT TTTT GAGCTCTGGAAC TTTTTTCGCCACATT hcp7 3402632 - 3403150 + | hypothetical protein TERM 3690 3403163 - 3403192 + T 100 -13.7 -4.7871 | overlap 3403164 TAATATTGTATTTCT TCAGCAGCCAATG AGGT TATTGGCTGCTGG TTTTTACTGATGGTT TERM 3691 3403164 - 3403191 + T 100 -15 -3.46141 | overlap 3403163 AATATTGTATTTCTT CAGCAGCCAATG AGGT TATTGGCTGCTG GTTTTTACTGATGGT YP_3070 3403652 - 3403302 - | hypothetical protein YP_3071 3403656 - 3403814 + | hypothetical protein TERM 3692 3404018 - 3404001 - T 100 -12.7 -5.41359 | AACCAAACGAAAAAA GGTGCGC CAAG GCGCACC AACCATCCAGCCATA malM 3404980 - 3404051 - | maltose regulon periplasmic protein TERM 3693 3404545 - 3404572 + g 74 -4.9 -4.7497 | gap 1, overlap 3404538 ATTTCATCACGCCTT GCAGGCGATCAT TGATC ATGAT-GCCCGC TTTTTCATAGGTGAA TERM 3694 3404734 - 3404724 - G 79 -8.2 -4.28774 | GCAGGCAAGGCAAAA GCGG CTA CCGC GCCTTCAACCTCACC TERM 3695 3404774 - 3404760 - G 79 -11.4 -3.52906 | opp_overlap 3404759, overlap 3404758 TCACCCTGAGAAATA TGCGGG CTG CCCGCA GTAAGTTGAATATCT TERM 3696 3405191 - 3405172 - R 80 -11.4 -2.66969 | overlap 3405168 3405169 CATCAAGATAACGTA CAGCCGCC CGCA GACGGCTG AAGAATCGCTGTTAC lamB 3406474 - 3405203 - | maltoporin malK2 3407654 - 3406545 - | maltose/maltodextrin transporter ATP-binding protein TERM 3697 3407426 - 3407446 + g 70 -11.1 -2.64466 | opp_overlap 3407420, overlap 3407425 GAAACACCATGCCAA TGCCGCGCT CAG AGGGCGGCA CTTCATTCATGCGTT amyA 3408004 - 3407642 - | glycosidases TERM 3698 3408739 - 3408777 + G 76 -7.5 -4.29738 | gap 1, opp_overlap 3408729 ACAAGTCGCCGCAAC CGGTGAT-GGCCCGGA CATTATCT TCTGGGCCCATGACCG TTTTGGTGGCTATGC malE 3408482 - 3409693 + | maltose ABC transporter periplasmic protein TERM 3699 3409732 - 3409711 - f 95 -11.5 -3.87815 | GTCTACTCTGAGAAA GGGGCACGG TTCG CCGTGCCTC GACAGAATTTGCCAT TERM 3700 3409937 - 3409923 - g 80 -2.1 -5.42198 | gap 1, overlap 3409924 GCCGAAAAAAGAAAA TC-GCC TGGT GGCAGA GTGATGCGCTTAAAT malF 3409865 - 3411457 + | maltose transporter membrane protein malG 3411450 - 3412361 + | maltose transporter permease TERM 3701 3412439 - 3412459 + T 100 -9.6 -5.24799 | overlap 3412440 GGTACTGTGTCTTTA GGGCGGCC TTAAT GGCCGCCA TTTTTATGTTTATCA TERM 3702 3412440 - 3412458 + T 100 -13.1 -3.73253 | overlap 3412439 GTACTGTGTCTTTAG GGCGGCC TTAAT GGCCGCC ATTTTTATGTTTATC YP_3079 3412911 - 3412504 - | phosphate-starvation-inducible protein PsiE TERM 3703 3412835 - 3412821 - G 87 -4.2 -5.52384 | overlap 3412800 CCTTCACCAAAAAAA CCACCA AAA TAGCGG CCAACATAATCAATC TERM 3704 3413006 - 3412984 - R 100 -10.6 -5.86332 | TCAAGCCAAAAAAAA GGCCCCTTAC AGA ATAAGAGGCC TAATAAAGTACAGAT pgi 3414692 - 3413046 - | glucose-6-phosphate isomerase TERM 3705 3414407 - 3414426 + g 82 -11.4 -3.75115 | opp_overlap 3414400 3414407 3414405, overlap 3414404 GAGCAATATGCAATA CCGCACGG TCTT CTGTGCGG TTAATTTTCTCACCA lysC2 3415063 - 3416448 + | aspartate kinase III TERM 3706 3416695 - 3416677 - f 74 -4.5 -4.89393 | opp_overlap 3416677, overlap 3416667 3416666 TAAACCTCAGAAAAA TGCCTGA GATCA TCGGGCA TTCACTGCTAACACG TERM 3707 3418558 - 3418547 - f 75 -5.8 -4.72272 | opp_overlap 3418553, overlap 3418548 CGTCTCCAGCAAAAA CCAC AGGG GTGG GTCAGCGCTATGGGG TERM 3708 3422171 - 3422138 - g 82 -10.9 -3.9344 | AAGCCGAACAGTAAA GACTTTGGCGGCGGC TTGG GCGGCGGCCATAGTC AAGGCAGCACCAGTG TERM 3709 3422872 - 3422848 - g 70 -4.4 -4.67982 | gap 1, overlap 3422851 TGTGACGCAACAAAA CACCCATATCA ACAG TGATA-AGGTG ACCCTGAACAGCGCT TERM 3710 3423182 - 3423169 - g 93 -8.1 -5.13722 | CTTAGGAAAAGAAAA GGACG ATAG CGTCC AGACCATCAGCTATA hylA 3418721 - 3423685 + | hemolysin TERM 3711 3423756 - 3423703 - T 80 -8.9 -3.967 | opp_overlap 3423712, overlap 3423711 3423716 AATCCATTAATTAAA CTGTAATATCGAAGGGGATAAACCA ATCA CGGTTTATCCCCCTCGTTAGATCAA CATTATCTCGCCTTT TERM 3712 3423748 - 3423711 - T 100 -15.7 -3.13784 | opp_overlap 3423712, overlap 3423703 3423716 AATTAAACTGTAATA TCGAAGGGGATAAACCA ATCA CGGTTTATCCCCCTCGT TAGATCAACATTATC TERM 3713 3423712 - 3423747 + T 100 -16.3 -3.0701 | opp_overlap 3423711 3423703 3423716 ATTAAACTGTAATAT CGAAGGGGATAAACC AATCAC GGTTTATCCCCCTCG TTAGATCAACATTAT TERM 3714 3423743 - 3423716 - T 100 -15 -3.19293 | opp_overlap 3423712, overlap 3423711 3423703 AACTGTAATATCGAA GGGGATAAACCA ATCA CGGTTTATCCCC CTCGTTAGATCAACA metH 3427476 - 3423781 - | B12-dependent methionine synthase TERM 3715 3424735 - 3424770 + g 87 -7.5 -5.0133 | opp_overlap 3424755 CACCGTTGGGTTATT CCGTGCAGCCTGC AAACTGACCG GCGGGGTGCGCGG TTTTTTACGGGCGTG TERM 3716 3425538 - 3425550 + g 74 -4.1 -4.9218 | CGACCTCGCCACTTT TACTG TCA CGGTA TTTTTCTGCTAAATC TERM 3717 3427896 - 3427911 + G 70 -4.6 -4.71828 | ACCGTTTACTCACGA CCATGC AACA GCAGGG TTTTGTTCGTCAGGT iclR 3427691 - 3428533 + | transcriptional repressor IclR aceK 3430380 - 3428653 - | bifunctional isocitrate dehydrogenase kinase/phosphatase protein TERM 3718 3428810 - 3428791 - G 73 -2.8 -5.0133 | gap 1 CATCTCCTCAAAAAA GTG-CCTGA CTT TCCGGTCAC TGCATAAGAAATGGC TERM 3719 3430425 - 3430402 - R 74 -6.6 -4.4009 | opp_overlap 3430402 3430401, overlap 3430406 CCCTACCGTACAAAA CGGAGCCTGC ATAA GCAGGCTGAG GTTATTGACAAAGTG TERM 3720 3430421 - 3430406 - R 75 -10.4 -2.80345 | opp_overlap 3430402 3430401, overlap 3430402 ACCGTACAAAACGGA GCCTGC ATAA GCAGGC TGAGGTTATTGACAA TERM 3721 3430499 - 3430525 + r 72 -10.1 -2.88849 | gap 1, opp_overlap 3430488, overlap 3430494 3430500 ACATCCATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCTCTGCC TERM 3722 3430500 - 3430526 + r 84 -10.1 -3.82218 | gap 1, opp_overlap 3430488, overlap 3430494 3430499 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCTCTGCCT aceA 3431943 - 3430636 - | isocitrate lyase aceB 3433621 - 3431990 - | malate synthase TERM 3723 3432977 - 3432966 - G 74 -7.2 -4.27843 | opp_overlap 3432969, overlap 3432963 GGCAAATAGAAATAA GGGC CGCT GCCC TTCGCCAGCAGTTGC TERM 3724 3433964 - 3433944 - R 70 -7.5 -3.8165 | opp_overlap 3433943, overlap 3433942 GGGAAGAAAATAATA GGCGGCC TCGATTC AGCCGCC ATAATTAGCATCTAT metA 3434938 - 3434009 - | homoserine O-succinyltransferase TERM 3725 3435667 - 3435635 - H 100 -13.6 -4.62783 | gap 1, opp_overlap 3435635 3435642, overlap 3435642 GACGGATCGCAAAAA CAGAAAAGGCCACCC TAAT GGATGGCC-TTTCTG TTTATTTGATACCTG TERM 3726 3435635 - 3435667 + H 100 -11.4 -4.50627 | gap 1, opp_overlap 3435635 3435642, overlap 3435642 GACGGATCGCAAAAA CAGAAAAGGCCACCC TAAT GGATGGCC-TTTCTG TTTATTTGATACCTG TERM 3727 3435642 - 3435661 + H 95 -9.2 -4.50993 | opp_overlap 3435635 3435642, overlap 3435635 CGCAAAAACAGAAAA GGCCACCC TAAT GGATGGCC TTTCTGTTTATTTGA TERM 3728 3435661 - 3435642 - H 100 -11.4 -4.98672 | opp_overlap 3435642 3435635, overlap 3435635 CGCAAAAACAGAAAA GGCCACCC TAAT GGATGGCC TTTCTGTTTATTTGA TERM 3729 3436145 - 3436135 - H 74 -6.8 -4.27316 | opp_overlap 3436135 TCTCTCAATTCAAAA CACC TTC GGTG TTGTAAGGTTAAGCC TERM 3730 3437257 - 3437268 + H 74 -4.4 -5.06816 | CCACTTTCGTGTTTG CACA GTGC TGTG TTTTTATTAAACAGT TERM 3731 3437304 - 3437330 + H 70 -9.4 -2.75844 | opp_overlap 3437280 3437282, overlap 3437303 3437306 CCAGCTGGTATCTGC GACTGGCTTCAG CTC CAGGAGCTAGTC CTTTCACCTAACGCC TERM 3732 3437764 - 3437782 + H 82 -10.3 -3.57798 | overlap 3437757 CTTGGTCTTCCGGCG TGCGGGT TTTTC ACCCGCA TTATCGTTACTTATG YP_3090 3441138 - 3441314 + | hypothetical protein purH 3441737 - 3443371 + | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase TERM 3733 3444441 - 3444473 + G 76 -12 -2.87003 | overlap 3444437 3444437 GGGGGTCGTTTTAGC CGCTGGCGGTTATC CAGCA GATTACCGCCAGGG TGATGTTATTCATGG purD 3443407 - 3444717 + | phosphoribosylamine--glycine ligase YP_3093 3445585 - 3444884 - | hypothetical protein TERM 3734 3445559 - 3445546 - G 79 -5.2 -4.99043 | GCTGCATAAACAAAA GGGG TTTTAT CCCC CCCCTGCTTATTATT hupA 3445862 - 3445587 - | transcriptional regulator HU subunit alpha YP_3095 3446641 - 3446051 - | hypothetical protein nfi 3447391 - 3446687 - | endonuclease V TERM 3735 3447199 - 3447183 - G 77 -10.9 -3.56959 | opp_overlap 3447182, overlap 3447174 ATATAAGGCAGAGAA GTTGCCA CTC TGGCAAC CTGGTATTCCACCAG hemE 3448524 - 3447457 - | uroporphyrinogen decarboxylase TERM 3736 3447652 - 3447669 + g 78 -9.9 -3.85698 | AACCGAAGGATCCAT GTTGCCT TGCA AGGCAAC TTTATCACCAACACG TERM 3737 3448346 - 3448328 - G 76 -11 -3.33492 | GCATCCAGCGGATAA CGACGCAG TGG CTGCATCG TGACCTCACAGGCTA YP_3098 3449428 - 3448643 - | hypothetical protein nudC 3450318 - 3449521 - | NADH pyrophosphatase rsd 3450400 - 3450909 + | anti-RNA polymerase sigma 70 factor TERM 3738 3450984 - 3450961 - f 86 -8.9 -4.37886 | opp_overlap 3450969 3450974, overlap 3450974 GTAGCGTGCACAAAA TGAGCAAGC AGAATA GCCTGCTCA TAAGTAGGCTATTGT TERM 3739 3450974 - 3450995 + F 78 -9.5 -3.72152 | opp_overlap 3450961 3450974, overlap 3450969 AATGAGCAAGCAGAA TAGCCTGCT CATA AGTAGGCTA TTGTAGTTTTAATTC YP_3101 3451032 - 3451292 + | hypothetical protein thiC 3451285 - 3453330 + | thiamine biosynthesis protein ThiC TERM 3740 3453762 - 3453784 + GF 76 -11.2 -2.71731 | opp_overlap 3453757 3453760 3453759 AGACCAAACAGATGC CGTCATCCCC ACA GGGGTTGGCG TCGTTAAGCCGTCAG thiE 3453302 - 3453991 + | thiamine-phosphate pyrophosphorylase TERM 3741 3454477 - 3454464 - gf 74 -4.5 -4.85599 | overlap 3454472 GTCACGGCACAAAAA CCACT AATC AGCGG CAGTGCTGTGGGGTT thiF 3453981 - 3454778 + | thiamine biosynthesis protein ThiF thiS 3454718 - 3454990 + | sulfur carrier protein ThiS thiG 3454992 - 3455807 + | thiazole synthase TERM 3742 3456521 - 3456531 + G 70 -3.2 -4.86731 | overlap 3456515 ACTGTTATATGCTGG CGGA GCA TCTG TTTTATTTGCAACAA TERM 3743 3456887 - 3456871 - g 70 -4.3 -4.65747 | overlap 3456872 CAAGCGTTAACAAAA GCAGGCT TAC AGCCCGT GTGGAAAGATTGGGA thiH 3455785 - 3456930 + | thiamine biosynthesis protein ThiH TERM 3744 3456968 - 3456955 - T 70 -3.7 -4.74706 | opp_overlap 3456956, overlap 3456956 CGTAATATTGAAAAA CCGCC CGAA GGCGT AATATCAGTGAGTTA YP_3108 3457086 - 3456973 - | hypothetical protein TERM 3745 3457157 - 3457174 + r 76 -9.8 -3.32022 | opp_overlap 3457157 AATAAACAAAAAAAA CGGCCC GAGAAG GGGCCG TTCGTCTCTCAAAAA TERM 3746 3457174 - 3457157 - R 100 -9.8 -6.32017 | opp_overlap 3457157 AATAAACAAAAAAAA CGGCCC GAGAAG GGGCCG TTCGTCTCTCAAAAA TERM 3747 3457185 - 3457216 + r 84 -11.7 -3.21099 | opp_overlap 3457190, overlap 3457190 GGCCGTTCGTCTCTC AAAAACCCGCATC CCGAAA GATGCGGGTTTTG TTGGTAGTAGGCAAA TERM 3748 3457190 - 3457211 + r 100 -11.6 -4.73613 | opp_overlap 3457190, overlap 3457185 TTCGTCTCTCAAAAA CCCGCATC CCGAAA GATGCGGG TTTTGTTGGTAGTAG TERM 3749 3457211 - 3457190 - R 100 -12.3 -4.56597 | opp_overlap 3457190 3457185 TTCGTCTCTCAAAAA CCCGCATCC CGAA AGATGCGGG TTTTGTTGGTAGTAG rpoC 3461456 - 3457236 - | DNA-directed RNA polymerase subunit beta' TERM 3750 3459644 - 3459659 + g 70 -2.6 -5.00616 | gap 1 GGTAACACGTGTTCA GC-ATCT TAG AGATAGC TTTTTTACCCAGCGG rpoB 3465613 - 3461585 - | DNA-directed RNA polymerase subunit beta TERM 3751 3461683 - 3461693 + g 79 -5.4 -4.91459 | overlap 3461690 CCATACGGTGATCGC CATC CAC GATG TTTTTGTACATCTTG TERM 3752 3462571 - 3462587 + g 91 -10.9 -4.56314 | CGTCGTACTGCTCTG CCAACTG TTC CAGTTGG TTTTGCTTGTCTTCG TERM 3753 3464959 - 3464945 - G 72 -8.6 -3.9122 | opp_overlap 3464933 CACTTTCTCAAAGAA CAGATC CAA GATCTG TGCAGTGGTGAAATT TERM 3754 3465916 - 3465891 - R 100 -14.1 -4.64766 | CCTACAGCGCAAAAA GGCTGATGACT AAAA AGTCACCAGCC ATCAGCCTATAAAGT rplL 3466243 - 3465956 - | ribosomal protein L7/L12 rplJ 3466888 - 3466391 - | 50S ribosomal protein L10 TERM 3755 3466928 - 3466910 - R 95 -13.2 -3.14132 | TTGCTCCTGGATTAA CCGGAGAA TAA TTCTCCGG AACTCACGTCACCCA TERM 3756 3466966 - 3466945 - R 71 -9.5 -3.06915 | ACTCACGTCACCCAA TTCACGACA AAAT TGCCGTGAA CGAGCGTTGAAACAC TERM 3757 3467010 - 3467045 + r 73 -3.5 -4.94962 | opp_overlap 3467040, overlap 3467040 CAGCAAAGACTATTC TTTATCATTCTTTAT AAACAA ATAAAGAAAGAAAAA TTTTCTTTAGGTTCT TERM 3758 3467050 - 3467040 - R 71 -4 -4.88895 | opp_overlap 3467010 3467040 AAACAAATAAAGAAA GAAA AAT TTTC TTTAGGTTCTGTCAC TERM 3759 3467230 - 3467189 - R 93 -12.6 -3.16553 | gap 1, overlap 3467187 3467191 3467194 3467216 ACAACGATCAACAGA TAGCATGGGCGTAAGATTT TAGAC AAACCTTACGCCCACG-TA AAGCGATAAAAGCAA TERM 3760 3467229 - 3467191 - R 100 -13.3 -3.13565 | overlap 3467189 3467187 3467194 3467216 AACGATCAACAGATA GCATGGGCGTAAGATTT TAGAC AAACCTTACGCCCACGT AAAGCGATAAAAGCA TERM 3761 3467226 - 3467194 - R 100 -15.8 -2.76689 | overlap 3467191 3467189 3467187 3467216 GATCAACAGATAGCA TGGGCGTAAGATTT TAGAC AAACCTTACGCCCA CGTAAAGCGATAAAA rplA 3467957 - 3467253 - | 50S ribosomal protein L1 rplK 3468389 - 3467961 - | 50S ribosomal protein L11 TERM 3762 3468539 - 3468511 - R 100 -16.2 -5.2853 | CATCTAAAAACAAAA GGCGCGAAATTA TATTT TAATTTCGCGCC TAAGACAAGACTCAA nusG 3469125 - 3468580 - | transcription antitermination protein NusG TERM 3763 3469194 - 3469151 - R 74 -6.8 -4.25056 | gap 1, overlap 3469160 CAGGCCAGTAATAAA TGATACCAAGCGGACTAGGAT ACC ATCC-AGTCCCCATAGAATCA GTGACATTACAGCAG secE 3469510 - 3469127 - | preprotein translocase subunit SecE TERM 3764 3469569 - 3469545 - R 79 -7.9 -4.28115 | overlap 3469538 3469546 ATTCAGAACAAACAA CTTTGCTTCGC ATC GCAAAGCAAAC CAAGCCGAAGGATGC TERM 3765 3469568 - 3469546 - R 84 -11.4 -3.15784 | overlap 3469538 3469545 TTCAGAACAAACAAC TTTGCTTCGC ATC GCAAAGCAAA CCAAGCCGAAGGATG TERM 3766 3469719 - 3469736 + r 100 -11.3 -4.41548 | opp_overlap 3469719 TGCAACGTATAAAAA GGGCATC AAAT GATGCCC TTTTATCGCATGTCG TERM 3767 3469736 - 3469719 - R 100 -11.3 -4.91712 | opp_overlap 3469719 TGCAACGTATAAAAA GGGCATC AAAT GATGCCC TTTTATCGCATGTCG tuf 3470945 - 3469761 - | elongation factor Tu TERM 3768 3471998 - 3472016 + r 77 -11 -2.73735 | overlap 3471991 3472008 3472010 TGCTTTTCTACCTGA GTCCGGTA TTC TGCCGGAC TCATTCCGCCTGTTT tra5F 3472764 - 3471979 - | IS1661 transposase YP_3120 3473333 - 3472818 - | IS1661 DNA-binding protein TERM 3769 3473384 - 3473338 - R 100 -15.4 -3.05384 | gap 1, opp_overlap 3473344, overlap 3473343 3473364 GGGTGTTTCATTGAA CCGAACCTCCAGATCATGGAT AAAAAG ATCCAAGATCTGG-GGTTCAG TGCAAAGCGTGGCCC TERM 3770 3473379 - 3473343 - R 77 -10.3 -3.19192 | gap 1, opp_overlap 3473344, overlap 3473338 3473364 TTTCATTGAACCGAA CCTCCAGATCATGGAT AAAAAG ATCCAAGATCTGG-GG TTCAGTGCAAAGCGT TERM 3771 3473344 - 3473379 + r 93 -12.7 -3.05463 | opp_overlap 3473343 3473338 3473364 TTCATTGAACCGAAC CTCCAGATCATGGAT AAAAAG ATCCAAGATCTGGGG TTCAGTGCAAAGCGT TERM 3772 3473374 - 3473364 - R 75 -5.4 -4.88736 | opp_overlap 3473344, overlap 3473343 3473338 GATCATGGATAAAAA GATC CAA GATC TGGGGTTCAGTGCAA TERM 3773 3473413 - 3473391 - R 75 -9 -3.59979 | GGGGTTCAGTGCAAA GCGTGGCCCC CTT GGAACCCCGC GCTTTCGCACTATCG TERM 3774 3473669 - 3473702 + r 87 -5.5 -5.47399 | opp_overlap 3473669 TTTAAGGTCAAAGAC CAATTCAAAATCT AAAGAAGA GGGTTTTGAATTG TTTTTTTGACGTTGA TERM 3775 3473812 - 3473784 - R 93 -11 -4.1899 | gap 1 GGACGCCAGCGAAAA GCGCGCTTGGGCA GGGA TGCCC-ATCGCGC TGGCTCGTCAGCCCG TERM 3776 3473879 - 3473904 + r 100 -16.2 -2.52543 | GCGCAAGCCGCAGGT GCAGGAGGGC CGGCTA GCCCTCCTGC TCGGTTGAGGCGACT ppc 3476711 - 3474075 - | phosphoenolpyruvate carboxylase argE2 3478254 - 3477085 - | acetylornithine deacetylase argC 3478499 - 3479503 + | N-acetyl-gamma-glutamyl-phosphate reductase argB 3479672 - 3480445 + | acetylglutamate kinase TERM 3777 3481480 - 3481466 - g 90 -5.7 -5.24796 | overlap 3481468 3481470 GCCACAGAAGAAAAA TCCAG ATGCG CTGGA GCTCATCCGTGGTAA TERM 3778 3481939 - 3481923 - g 70 -9.3 -3.5594 | opp_overlap 3481914 3481918 3481934, overlap 3481924 AAGCGAGTGGCCAAA GGCGGCG TTT CGCCGCA GCAGGTTGCATCGGC TERM 3779 3481938 - 3481924 - g 77 -12.8 -2.73243 | opp_overlap 3481914 3481918 3481934, overlap 3481923 AGCGAGTGGCCAAAG GCGGCG TTT CGCCGC AGCAGGTTGCATCGG argH 3480612 - 3481985 + | argininosuccinate lyase TERM 3780 3482043 - 3482010 - f 76 -10.1 -3.33261 | opp_overlap 3482014 TTTTAATCTTGAGAA CGGGGCGGGCCGCTA ATTG CAGCGGCCCGCTTTG CATTAACAGTTACTA TERM 3781 3482014 - 3482039 + F 100 -17.6 -3.75897 | opp_overlap 3482010 AATCTTGAGAACGGG GCGGGCCGCT AATTGC AGCGGCCCGC TTTGCATTAACAGTT TERM 3782 3482635 - 3482615 - g 70 -2 -4.92669 | opp_overlap 3482634, overlap 3482634 GAGATAAAAAAACAA TAATTTCA GTGAA TAAAATTA CAACTTGTATATTAT TERM 3783 3484378 - 3484388 + G 71 -6.8 -4.25256 | GACGATCACTTTGCC GCGA AGG TCGC TTATTTTGATACCCG hasR 3482584 - 3485076 + | putative TonB dependent receptor protein TERM 3784 3485171 - 3485138 - f 100 -18.3 -4.26351 | overlap 3485139 CAGCAAGTGAATAAA TCCCGCATCATTGAC GGCA GTCAATGATGCGGGT GAGAGAACACAGCTA TERM 3785 3485170 - 3485139 - f 100 -21.8 -3.15087 | overlap 3485138 AGCAAGTGAATAAAT CCCGCATCATTGAC GGCA GTCAATGATGCGGG TGAGAGAACACAGCT hasA 3485298 - 3485915 + | hemophore HasA TERM 3786 3485946 - 3485922 - f 100 -13.7 -5.06414 | opp_overlap 3485920 3485941 GCCGCTTAAGAAAAA CAGCCAGAAAA TAA CTTTCTGGCTG AGTCATTGATACCAC hasD 3486066 - 3487883 + | ABC transporter protein hasE 3487959 - 3489287 + | HlyD family secretion protein hasB 3489352 - 3490155 + | hypothetical protein TERM 3787 3490236 - 3490252 + T 89 -11.5 -3.53811 | opp_overlap 3490236 ACGGGGGATTAAAAA CCGGGCG CCG TGCCCGG TTTGAACCGCCTGAG TERM 3788 3490252 - 3490236 - T 100 -10.8 -4.7254 | opp_overlap 3490236 ACGGGGGATTAAAAA CCGGGC GCCGT GCCCGG TTTGAACCGCCTGAG lpd 3491734 - 3490271 - | dihydrolipoamide dehydrogenase TERM 3789 3491209 - 3491191 - G 79 -7.4 -4.56597 | CGCCTGGGCCAAAAA CTGCCACA GAT TCTGGCAG ATCGTCCCAATTAAA TERM 3790 3491775 - 3491758 - R 100 -11.3 -6.10295 | opp_overlap 3491756 CTAACAGAAAAAAAA GGTAGGC CGGA GCCTACC AAGTTACTTCCTATT aHP1 3492560 - 3491829 - | putative peroxiredoxin/glutaredoxin family protein TERM 3791 3492121 - 3492111 - G 70 -8.2 -3.65693 | opp_overlap 3492110 3492107 3492111 ATCAGATACTTCAAA CGGG TCG CCCG GTTTGTTTGGCTCGA TERM 3792 3492125 - 3492142 + g 84 -4.2 -5.24129 | overlap 3492107 ACGGGTCGCCCGGTT TGTTTG GCTCGA CAAACA TTTTTTCTACCACGC oxyR 3492707 - 3493624 + | DNA-binding transcriptional regulator OxyR sthA 3495007 - 3493607 - | soluble pyridine nucleotide transhydrogenase acrR5 3495213 - 3495860 + | DNA-binding transcriptional repressor FabR YP_3136 3495873 - 3496280 + | hypothetical protein TERM 3793 3496366 - 3496384 + T 100 -10.3 -4.83243 | opp_overlap 3496366, overlap 3496351 CGTCTTGCCAACTAA GGGCAAC ATGTC GTTGCCC TTTCTTTTATCTGCG TERM 3794 3496384 - 3496366 - T 81 -11 -3.33696 | opp_overlap 3496351 3496366 CGTCTTGCCAACTAA GGGCAACA TGT CGTTGCCC TTTCTTTTATCTGCG TERM 3795 3496412 - 3496422 + T 76 -6.8 -4.57569 | GCGGTATGAATTATT CGTC AGT GACG TTTTTCCAGCAGTAC trmA2 3497517 - 3496414 - | tRNA (uracil-5-)-methyltransferase btuB 3497913 - 3499874 + | vitamin B12/cobalamin outer membrane transporter TERM 3796 3499971 - 3499945 - gf 100 -13.8 -3.14132 | opp_overlap 3499942 3499939 CTGTCTGTCTATCAA GAGATTCGGCAA CTG TTGCCGGATCTC CACTATATATATGCT TERM 3797 3500435 - 3500447 + GF 72 -7.7 -3.76775 | opp_overlap 3500434 3500431 CGGATACTATAGTAT TGGGT TGC ACCCA TTTCCCTCTATTAAC murI 3499819 - 3500682 + | glutamate racemase TERM 3798 3501394 - 3501384 - f 74 -6.8 -4.27316 | opp_overlap 3501384 TCTCTCAATTCAAAA CACC TTC GGTG TTGTAAGGTTAAGCC TERM 3799 3502506 - 3502517 + F 74 -4.4 -5.06816 | CCACTTTCGTGTTTG CACA GTGC TGTG TTTTTATTAAACAGT TERM 3800 3502553 - 3502579 + F 70 -9.4 -2.75844 | opp_overlap 3502529 3502531, overlap 3502552 3502555 CCAGCTGGTATCTGC GACTGGCTTCAG CTC CAGGAGCTAGTC CTTTCACCTAACGCC TERM 3801 3503013 - 3503031 + F 82 -10.3 -3.57798 | overlap 3503006 CTTGGTCTTCCGGCG TGCGGGT TTTTC ACCCGCA TTATCGTTACTTATG TERM 3802 3504469 - 3504506 + F 78 -5.7 -4.7629 | opp_overlap 3504463 3504469 3504472, overlap 3504472 ATTGTTAAAGAGCAA TATCGTAAACACGACTT GGTA AAGTCATCTTTACGTTA TTTTTCAGTTCATAA TERM 3803 3504472 - 3504503 + F 78 -7.4 -4.47888 | opp_overlap 3504469 3504463 3504472, overlap 3504469 GTTAAAGAGCAATAT CGTAAACACGACTT GGTA AAGTCATCTTTACG TTATTTTTCAGTTCA TERM 3804 3506592 - 3506573 - f 100 -9.2 -5.36441 | opp_overlap 3506573 CTGCCAGATAAAAAA CCCTTCGC GAAA GCGAGGGG TTTTTTATTTTAAGT TERM 3805 3506573 - 3506592 + F 100 -11.4 -5.80951 | opp_overlap 3506573 CTGCCAGATAAAAAA CCCTTCGC GAAA GCGAGGGG TTTTTTATTTTAAGT TERM 3806 3506676 - 3506692 + F 73 -3.8 -5.02201 | TCGCTTTCTCTTTCC TCATTA TAATT TAATGA TTTTTATAATATTTT rbsB8 3507546 - 3508502 + | putative periplasmic protein precursor TERM 3807 3508507 - 3508531 + F 87 -8.4 -4.4195 | overlap 3508510 TTGGTTATTGATTCA GATGGCGGGG CTTGC CCCCGCCTGC TTTTATCACCTGTAT TERM 3808 3508510 - 3508528 + F 95 -13.1 -3.18044 | overlap 3508507 GTTATTGATTCAGAT GGCGGGG CTTGC CCCCGCC TGCTTTTATCACCTG mglA6 3508588 - 3510078 + | putative sugar transport system ATP-binding protein araH10 3510090 - 3511109 + | putative sugar transport system permease araH11 3511109 - 3512101 + | inner membrane ABC transporter permease protein YjfF lysR20 3512969 - 3512088 - | transcriptional regulator HdfR TERM 3809 3513272 - 3513258 - g 72 -10 -3.45087 | opp_overlap 3513256 3513258, overlap 3513256 AGTAACGGAAGAAGA GCAACG GTT CGTTGC TGTTTGCCGTGGCGA TERM 3810 3513258 - 3513272 + G 72 -10 -3.38046 | opp_overlap 3513258 3513256, overlap 3513256 AGTAACGGAAGAAGA GCAACG GTT CGTTGC TGTTTGCCGTGGCGA YP_3145 3513004 - 3513426 + | hypothetical protein TERM 3811 3513663 - 3513678 + T 100 -11.8 -4.20516 | GTTAGTTGAGTATTA GGGGGC TTTG GCCCCC TTTGTTACATCAGGC YP_3146 3515206 - 3513683 - | putative magnesium chelatase family protein TERM 3812 3515737 - 3515714 - H 100 -13.8 -3.69069 | opp_overlap 3515714 TTAATCTCAAGAGAA CCCCCGCACC GAAA GGTCCGGGGG TTTTTTATTGGCACG TERM 3813 3515714 - 3515737 + H 100 -13.8 -5.4505 | opp_overlap 3515714 TTAATCTCAAGAGAA CCCCCGCACC GAAA GGTCCGGGGG TTTTTTATTGGCACG TERM 3814 3516854 - 3516828 - g 74 -11.6 -3.14132 | opp_overlap 3516825 TCGTGGCGTGATGAA GTGATGGCGCTG AAA CAGCAACATCAC TGGCGTTATGACCAC ilvG 3515829 - 3517475 + | acetolactate synthase 2 catalytic subunit ilvM 3517472 - 3517729 + | acetolactate synthase 2 regulatory subunit TERM 3815 3518165 - 3518151 - g 70 -10 -3.28924 | opp_overlap 3518150 3518151 TATCTGGGTGCAGAA GCCTTG GAG CAAGGC ATTGATGCTATGGTG ilvE 3517752 - 3518678 + | branched-chain amino acid aminotransferase ilvD 3518989 - 3520839 + | dihydroxy-acid dehydratase ilvA 3520845 - 3522389 + | threonine dehydratase YP_3152 3523005 - 3522520 - | hypothetical protein TERM 3816 3522814 - 3522838 + g 79 -9.4 -4.25056 | overlap 3522815 TAGCCACCAGTTTAT TTTCCCTTTC TCAGT GAAAGGGAAG TTTCTTACTAAAATA TERM 3817 3522815 - 3522837 + g 71 -10.7 -3.14552 | overlap 3522814 AGCCACCAGTTTATT TTCCCTTTC TCAGT GAAAGGGAA GTTTCTTACTAAAAT YP_3153 3523546 - 3523064 - | hypothetical protein YP_3154 3524066 - 3523605 - | hypothetical protein YP_3155 3524964 - 3524050 - | hypothetical protein TERM 3818 3524782 - 3524795 + g 73 -5.3 -4.74453 | GCTTGAAATATTATG CAGAT TAAA ATCTG TTTTTAACTGTGTTG TERM 3819 3525252 - 3525218 - H 70 -7.9 -3.64831 | opp_overlap 3525215, overlap 3525215 3525219 CTAATAATGACATAA GCCGGATAAGCTTAT TATTG ACACGCTTATCCGGT TAACACCGCCTAAAT TERM 3820 3525251 - 3525219 - H 81 -11.4 -2.78176 | opp_overlap 3525215, overlap 3525218 3525215 TAATAATGACATAAG CCGGATAAGCTTAT TATTG ACACGCTTATCCGG TTAACACCGCCTAAA YP_3156 3525576 - 3525785 + | hypothetical protein ilvY 3526724 - 3525840 - | DNA-binding transcriptional regulator IlvY TERM 3821 3525870 - 3525884 + g 100 -11.4 -5.08824 | opp_overlap 3525870 3525858 AAATGCATCAATCAA CGGCTC TTG GAGCCG TTTTTTCGGTACACA TERM 3822 3525884 - 3525870 - G 77 -11.4 -3.41982 | opp_overlap 3525870, overlap 3525858 AAATGCATCAATCAA CGGCTC TTG GAGCCG TTTTTTCGGTACACA TERM 3823 3526613 - 3526581 - G 79 -7.6 -4.58395 | GTTATCGCGTAAAAA CAGGGGCTGGCCGA TAGTC TCTTCCAGCCGCTG GATCTGGCGGGAAAG TERM 3824 3526773 - 3526798 + H 72 -9.9 -2.87529 | gap 1, opp_overlap 3526771, overlap 3526772 TGCATAAGAAATCGG GTG-TATTGCAG AAA CTGCAATATCAC ATTGTTAATATATCA ilvC 3527007 - 3528485 + | ketol-acid reductoisomerase TERM 3825 3528517 - 3528539 + F 100 -9.8 -5.36441 | GTGATTTTATATTGA GCCTCCCTGT AAA AAAGGGGGGC TTTTTTATGTGCACC TERM 3826 3528601 - 3528589 - f 75 -9.1 -3.58533 | GTAGAATTGCCGAAA CCCCA GGG TGGGG TAAGAATATTAGGTA YP_3159 3528666 - 3528866 + | hypothetical protein TERM 3827 3530682 - 3530672 - g 76 -6.8 -4.43909 | AGGCTAATAAAAGAA GCCA AGT TGGC TGAGGATGAAAAGGG YP_3161 3530504 - 3530767 + | hypothetical protein TERM 3828 3530789 - 3530817 + F 82 -3.2 -5.47964 | gap 1 ATATGCTTCAGTTAA CGTCCAGTCAATG AGTG TATTG-TTGGGCG TTTTTCTTATTTTAT imm 3531240 - 3531530 + | colicin immunity protein TERM 3829 3531550 - 3531563 + T 78 -5.9 -4.81163 | opp_overlap 3531545 3531550, overlap 3531545 AATATATAATCCAAA CCGCC TTCT GGTGG TTTTGTTAATATTTA TERM 3830 3531946 - 3531967 + T 72 -9.5 -3.14564 | ATGCTGCCCGCAGGG TGAGTCTCA GGGG TGAGGCTCA TTAATCCCCAGGTGC YP_3164 3532141 - 3531983 - | hypothetical protein fimC7 3532983 - 3532165 - | pilus chaperone TERM 3831 3532632 - 3532603 - GR 80 -11.5 -2.6062 | gap 1, opp_overlap 3532606, overlap 3532602 3532600 3532606 CCCACCAGATAAGAT CAACCGCAGGCTAC GCT GT-GCCTGAGGTTG TAACCGGAATACCGG YP_3166 3534316 - 3532949 - | hypothetical protein TERM 3832 3532995 - 3533013 + gr 71 -5.9 -4.33004 | GCATTCACTGCTCCG GCGGTCA CTGTT TGCCCGC TTATTTTGCTTAACT TERM 3833 3533568 - 3533587 + gr 83 -10.7 -3.54129 | TCAGTACCCTCAATC GGGCCAG TAATTC CTGGCCC TTTAAACGCGATATA fimD5 3536959 - 3534332 - | putative outer membrane usher protein fimC8 3537718 - 3536987 - | putative fimbrial chaperone fimA6 3538312 - 3537782 - | putative fimbrial protein TERM 3834 3538393 - 3538339 - H 82 -10.2 -3.71794 | opp_overlap 3538348, overlap 3538348 ATGTAATCATTGAAA TGGAGTTAATTCCCCATTCGGATTTT AAT AAAATCCGAATGGGGAATTTGATTGA GTGAATATATATTCC TERM 3835 3538384 - 3538348 - H 100 -24.1 -3.11732 | opp_overlap 3538348, overlap 3538339 TTGAAATGGAGTTAA TTCCCCATTCGGATTTT AAT AAAATCCGAATGGGGAA TTTGATTGAGTGAAT TERM 3836 3538348 - 3538384 + H 100 -24.1 -3.93556 | opp_overlap 3538348 3538339 TTGAAATGGAGTTAA TTCCCCATTCGGATTTT AAT AAAATCCGAATGGGGAA TTTGATTGAGTGAAT TERM 3837 3538434 - 3538469 + H 100 -6.4 -6.06529 | gap 1, opp_overlap 3538443, overlap 3538435 GTTTTTATTATTCGT C-TCAAAATACCTTTTA ATT TCAAAGGTGTTTTGATG TTTTTTTTCTGTGTA TERM 3838 3538435 - 3538467 + H 100 -10.1 -4.65669 | opp_overlap 3538443, overlap 3538434 TTTTTATTATTCGTC TCAAAATACCTTTTA ATT TCAAAGGTGTTTTGA TGTTTTTTTTCTGTG TERM 3839 3538661 - 3538678 + G 70 -2.7 -4.75356 | opp_overlap 3538661 3538664, overlap 3538664 TATTTTCATTACCAA TCATACC CTTG GGTATTA TTTTTCGATATATTT YP_3170 3538572 - 3538799 + | hypothetical protein YP_3171 3539895 - 3539104 - | hypothetical protein TERM 3840 3540092 - 3540133 + r 71 -9.6 -3.06796 | gap 1, opp_overlap 3540093 3540095 3540100, overlap 3540100 GTATGACGAGTATAA ACATGAAATACGCCAC-CT TTTAT AGCGTGGCGTATTTCAGGA TTAGCTGCGGTACAA TERM 3841 3540132 - 3540093 - R 100 -13.1 -4.00038 | gap 1, opp_overlap 3540092 3540100, overlap 3540095 3540100 TATGACGAGTATAAA CATGAAATACGCCAC-CT TTTAT AGCGTGGCGTATTTCAGG ATTAGCTGCGGTACA TERM 3842 3540130 - 3540095 - R 100 -14.3 -3.58864 | gap 1, opp_overlap 3540092 3540100, overlap 3540093 3540100 TGACGAGTATAAACA TGAAATACGCCAC-CT TTTAT AGCGTGGCGTATTTCA GGATTAGCTGCGGTA TERM 3843 3540100 - 3540125 + r 73 -8.4 -3.61268 | gap 1, opp_overlap 3540095 3540093 3540100, overlap 3540092 AGTATAAACATGAAA TACGCCAC-CT TTTAT AGCGTGGCGTA TTTCAGGATTAGCTG TERM 3844 3540125 - 3540100 - R 77 -8.4 -4.05181 | gap 1, opp_overlap 3540100 3540092, overlap 3540095 3540093 AGTATAAACATGAAA TACGCCAC-CT TTTAT AGCGTGGCGTA TTTCAGGATTAGCTG ppiC 3540430 - 3540134 - | peptidyl-prolyl cis-trans isomerase C TERM 3845 3541507 - 3541522 + G 78 -2.6 -5.26316 | opp_overlap 3541518 GCCAACAACCCACAT GTTTTT GAAA AGAAAC TTTTTTCTGAACTGA TERM 3846 3542485 - 3542501 + G 79 -7.9 -4.47328 | TACGGCGAGTTGATT CGGCCAG AAC CTAGCCG TTTTCTGATGGAGTT TERM 3847 3542601 - 3542584 - g 100 -11.3 -4.66609 | opp_overlap 3542583 3542582 GAGCGTATGCAAAAA GGCCAGA GTCA TCTGGCC AATCTTCGTGCTCAG rep 3540565 - 3542640 + | ATP-dependent DNA helicase Rep YP_3174 3542786 - 3542613 - | hypothetical protein TERM 3848 3542701 - 3542678 - G 82 -11.1 -3.69702 | overlap 3542681 CAGTAGTGAAGATAA TAACGGGCA GTCTAT TGCCCGTTA GCCATGCATTAAGGC TERM 3849 3542698 - 3542681 - G 74 -8.4 -3.97511 | overlap 3542678 TAGTGAAGATAATAA CGGGCA GTCTAT TGCCCG TTAGCCATGCATTAA gppA 3544285 - 3542789 - | guanosine pentaphosphate phosphohydrolase rhlB 3545557 - 3544289 - | ATP-dependent RNA helicase RhlB TERM 3850 3544809 - 3544827 + g 86 -3 -5.59655 | opp_overlap 3544811, overlap 3544810 3544811 CATTCTTCTTCAATT AACGTCTG TAA CAGACGCA TTTTTTCTTCATTTG TERM 3851 3544825 - 3544811 - G 70 -10 -3.33696 | opp_overlap 3544811 3544810 3544809 TTCTTCTTCAATTAA CGTCTG TAA CAGACG CATTTTTTCTTCATT TERM 3852 3544868 - 3544878 + g 78 -2.4 -5.25803 | CAGCTCTTCTTTGAT GCGG TGA CCGG TTTTTTGTAACGGTT trxA2 3545676 - 3546002 + | thioredoxin 1 TERM 3853 3546785 - 3546807 + G 74 -6.9 -4.28369 | GTTGCCGGTAAGATT CGTCCGCCT AAAGA AGGCGAGCG TTATTTTGCATTGTT TERM 3854 3547070 - 3547088 + G 74 -6.8 -4.35461 | overlap 3547072 GCGACCAGCATTGCT TACAATCA CCC TGATTGTG TTTTGATGGTATTGC rho 3546482 - 3547741 + | transcription termination factor Rho TERM 3855 3547893 - 3547911 + F 100 -11.7 -5.46698 | opp_overlap 3547893 TTGAATCAGTCAAAA CGCCACG CCAGT CGTGGCG TTTTTTACTTTTGGA TERM 3856 3547911 - 3547893 - f 100 -11.7 -4.23892 | opp_overlap 3547893 TTGAATCAGTCAAAA CGCCACG CCAGT CGTGGCG TTTTTTACTTTTGGA rfe 3548276 - 3549373 + | putative undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase wzzE 3549409 - 3550470 + | lipopolysaccharide biosynthesis protein WzzE rffE 3550765 - 3551949 + | UDP-N-acetylglucosamine 2-epimerase TERM 3857 3551993 - 3552007 + G 74 -7 -4.42238 | overlap 3551991 TGGGTATATTGGTCT GCCGAC CGC GGCGGC TTTTGCTTCGCGTAA wecC 3551946 - 3553208 + | UDP-N-acetyl-D-mannosamine dehydrogenase rffG 3553199 - 3554272 + | dTDP-D-glucose-4,6-dehydratase TERM 3858 3554427 - 3554386 - gf 77 -10.9 -2.74144 | opp_overlap 3554386, overlap 3554385 3554389 CCTGCACCTTGAAAT CTATAGTGTCTATCGTTGG GCGA CCTACGAGAGACACCAAAG TCGATTAATCATCGG TERM 3859 3554424 - 3554389 - gf 76 -11.2 -2.64803 | opp_overlap 3554386, overlap 3554386 3554385 GCACCTTGAAATCTA TAGTGTCTATCGTTGG GCGA CCTACGAGAGACACCA AAGTCGATTAATCAT TERM 3860 3554948 - 3554930 - gf 89 -10.2 -3.93061 | opp_overlap 3554937 3554939 3554939 AGTCCAAAACTGAAA GCTGTCGC CGC GCGTCAGC AGGGCGCGACTGTTT rffH 3554357 - 3555448 + | glucose-1-phosphate thymidylyltransferase TERM 3861 3555899 - 3555920 + GF 72 -7.2 -3.9279 | overlap 3555914 TTTATTGGTGCTCGA CCCTACGG ATCAAC CCGTCGGG TTTGTGACGTTGCGT rffC 3555369 - 3556163 + | TDP-fucosamine acetyltransferase rffA 3556165 - 3557295 + | TDP-4-oxo-6-deoxy-D-glucose transaminase TERM 3862 3557331 - 3557360 + G 83 -13.7 -3.20227 | overlap 3557330 CGATTTGGACTGCCT GCTCTACGCTAAT CAAG ATTGGCGTAGGGC TATTGGTGGTTAAAC wzxE 3557297 - 3558553 + | putative lipopolysaccharide biosynthesis protein TERM 3863 3558792 - 3558817 + G 82 -7.5 -4.64861 | gap 1, overlap 3558803 GAGGCGGTTATTGCC CGTGCACAGGCG GAT CGCA-GTGCGCG TTTCTTTTGGCACGG wecF1 3558576 - 3559661 + | 4-alpha-L-fucosyltransferase wecF2 3559658 - 3561022 + | putative entero common antigen polymerase TERM 3864 3561724 - 3561738 + G 76 -7.2 -4.4078 | overlap 3561720 CGCATTCGTCGTCAG CTTAAG CTG CTTAAG TTTGTTGGTTATTAT wecG 3561031 - 3561771 + | putative UDP-N-acetyl-D-mannosaminuronic acid transferase TERM 3865 3562866 - 3562878 + G 89 -10.5 -4.41348 | GCTTCGATAACCTGA CCGCC CAT GGCGG TTTCTTTGCCGGGGG ansP3 3562295 - 3563686 + | putative transport protein YifK TERM 3866 3564207 - 3564180 - f 73 -7.2 -4.08706 | TTCGCACCACACAAA CATGTAGATATT TATT AATATTTACATG GACATAGGTCGAGAG TERM 3867 3564353 - 3564339 - f 100 -12.8 -4.33248 | opp_overlap 3564339 CAATTTCAGAAGAAA CCCCGC AAT GCGGGG TTTTTTTTCGCCTGA TERM 3868 3564339 - 3564353 + F 100 -12.8 -5.78622 | opp_overlap 3564339 CAATTTCAGAAGAAA CCCCGC AAT GCGGGG TTTTTTTTCGCCTGA TERM 3869 3565020 - 3565041 + F 100 -10.2 -5.60993 | opp_overlap 3565022 CCTGAAAATTTTAGA CACTTGCC CTTTTC GGCAAGTG TTTTTTTGTGCCCAG TERM 3870 3565061 - 3565079 + F 100 -16 -3.07307 | opp_overlap 3565061 TTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC TERM 3871 3565079 - 3565061 - f 100 -16 -4.36914 | opp_overlap 3565061 TTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC tnp_35 3565141 - 3565650 + | transposase for the IS1541 insertion element TERM 3872 3565724 - 3565756 + T 100 -11.3 -4.19704 | opp_overlap 3565731, overlap 3565728 3565730 3565731 CCTTATAGGCGCATA TGAAAAACCTCCGGC TAT GCCGGAGGATATTTA TTTTGGGTGCGCTTC TERM 3873 3565728 - 3565752 + T 100 -9.9 -4.68908 | opp_overlap 3565731, overlap 3565724 3565730 3565731 ATAGGCGCATATGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTTTGGGTGCG TERM 3874 3565730 - 3565750 + T 100 -12.5 -3.95475 | opp_overlap 3565731, overlap 3565728 3565724 3565731 AGGCGCATATGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTTTGGGTG TERM 3875 3565749 - 3565731 - T 100 -16 -4.8048 | opp_overlap 3565731 3565730 3565728 3565724 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTTGGGT TERM 3876 3565731 - 3565749 + T 100 -16 -2.962 | opp_overlap 3565731, overlap 3565730 3565728 3565724 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTTGGGT hemY2 3567063 - 3565843 - | putative protoheme IX biogenesis protein hemX 3568199 - 3567066 - | putative uroporphyrinogen III C-methyltransferase TERM 3877 3567438 - 3567448 + g 74 -6.8 -4.28762 | opp_overlap 3567438 GAAATCAGACATAAA GCTG TGC CAGC TTTTGCTCAGATTCT TERM 3878 3567448 - 3567438 - G 71 -6.8 -4.19024 | opp_overlap 3567438 GAAATCAGACATAAA GCTG TGC CAGC TTTTGCTCAGATTCT hemD 3568970 - 3568221 - | uroporphyrinogen-III synthase TERM 3879 3568454 - 3568436 - G 77 -11 -3.43203 | CCACCAGAATATCAA CACCGGCA CGT TGCCAGTG AGCACTTTGTTCGCT hemC 3569908 - 3568967 - | porphobilinogen deaminase TERM 3880 3570036 - 3570010 - R 78 -2.3 -5.4477 | overlap 3570015 3570026 AAATGCCTAAAAAAA CAACTGTTGCA ATGAA TACAACGATTG TAATGGATGCATGAC YP_3198 3570338 - 3570129 - | hypothetical protein cyaA 3570402 - 3572954 + | adenylate cyclase TERM 3881 3573071 - 3573097 + T 72 -10.1 -2.88849 | gap 1, opp_overlap 3573060, overlap 3573066 3573072 ACATCCATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCTCTGCC TERM 3882 3573072 - 3573098 + T 84 -10.1 -3.82218 | gap 1, opp_overlap 3573060, overlap 3573066 3573071 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCTCTGCCT TERM 3883 3573158 - 3573178 + T 73 -2.5 -5.14965 | overlap 3573159 GGTTTGTCAGCAGTC TGACACG TAAAAAT CGTGTCC TTTTTTGATCCAACT cyaY 3573524 - 3573198 - | frataxin-like protein YP_3201 3573670 - 3573858 + | putative lipoprotein TERM 3884 3574467 - 3574495 + G 73 -11.7 -2.64616 | overlap 3574466 AACCTATATTTTACG CGCCGCAGAGCAT ACG GTGCTGTGTGGCG TGGTGTCGATGGGCA dapF 3574042 - 3574866 + | diaminopimelate epimerase YP_3203 3574931 - 3575635 + | hypothetical protein xerC 3575632 - 3576543 + | site-specific tyrosine recombinase XerC TERM 3885 3576627 - 3576652 + G 74 -4 -5.0133 | gap 1, overlap 3576627 3576628 3576630 AATCGGCCAGTGATC G-CGCGGACTG AACAG CAGTCTGTGGC TTTTTTACAACAGTA YP_3205 3576543 - 3577259 + | flavin mononucleotide phosphatase TERM 3886 3577428 - 3577400 - g 74 -4.3 -4.86621 | opp_overlap 3577412, overlap 3577403 3577405 AGCCTGAATGAAAAA CAACGTGACGCCG TGG CCGCGCCGCGCGG CAACTTGTTGGTACT TERM 3887 3577425 - 3577403 - g 76 -6.8 -4.53777 | opp_overlap 3577412, overlap 3577400 3577405 CTGAATGAAAAACAA CGTGACGCCG TGG CCGCGCCGCG CGGCAACTTGTTGGT TERM 3888 3577412 - 3577432 + G 85 -12.5 -3.75024 | opp_overlap 3577403 3577400 3577405 AAACAACGTGACGCC GTGGCCGCG CCG CGCGGCAAC TTGTTGGTACTGGCC TERM 3889 3577827 - 3577817 - g 70 -8.2 -3.66995 | GGCAAAAAAGACGAA GGGC TGC GCCC GCAACATATTGAGAG uvrD 3577355 - 3579523 + | DNA-dependent helicase II TERM 3890 3579536 - 3579562 + T 76 -9.4 -3.40971 | overlap 3579535 TAATCTGATATTTGT GGTGGTTGCAGT GTC AGTGCGGCCACC TATCTATTTTTATTT acrR6 3580323 - 3579637 - | TetR family regulatory protein YP_3208 3580510 - 3580680 + | hypothetical protein TERM 3891 3580990 - 3581001 + G 73 -5.8 -4.46212 | TAATGCTATGGCTAT CGCT TTCG AGCG TTTTATGGTGAGCCG YP_3209 3580751 - 3581968 + | hypothetical protein YP_3210 3581982 - 3582824 + | hypothetical protein TERM 3892 3582908 - 3582929 + F 100 -7.3 -5.85178 | opp_overlap 3582908 GCAGGGTACGCAAAA CCGAAGTTG TTAC TGACTTCGG TTTTTTTTGGGTCTT TERM 3893 3583649 - 3583663 + G 85 -3.5 -5.42259 | gap 1, overlap 3583611 AGAGTTGGACGATAT CGAGGC TTCG GCC-CG TTTTTTTGAAGATGA corA2 3583473 - 3584423 + | magnesium/nickel/cobalt transporter CorA TERM 3894 3584462 - 3584506 + T 100 -8.8 -5.42862 | gap 2, opp_overlap 3584462 GCAACGAATAAAAAA GCCCGGTCACTC-A-ATTGG ACTAACC CCAATATTGAGTAACCGGGC TTTTTTTCGGCATCT TERM 3895 3584506 - 3584462 - T 100 -11.7 -5.5604 | gap 2, opp_overlap 3584462 GCAACGAATAAAAAA GCCCGGTCACTC-A-ATTGGA CTAAC CCCAATATTGAGTAACCGGGC TTTTTTTCGGCATCT rarD 3585480 - 3584521 - | hypothetical protein TERM 3896 3585185 - 3585171 - G 83 -9.2 -4.41494 | overlap 3585172 TACTGGCAATCAAAA CGGCGG TCA CCGCCA GTAACAATAGGCGCT TERM 3897 3585184 - 3585172 - G 73 -10.5 -3.24414 | overlap 3585171 ACTGGCAATCAAAAC GGCGG TCA CCGCC AGTAACAATAGGCGC paaI2 3585968 - 3585498 - | hypothetical protein pldA 3586190 - 3587068 + | phospholipase A TERM 3898 3587092 - 3587124 + F 95 -14.2 -2.86164 | gap 1, opp_overlap 3587099 3587101 GGCGTTATCACAGTT TCAGACACAGGCCGG TTAG CCGGCCTGTG-CAGA TCTAATAGTTGGGGG TERM 3899 3587118 - 3587099 - f 100 -15 -2.89191 | opp_overlap 3587092, overlap 3587101 TCACAGTTTCAGACA CAGGCCGG TTAG CCGGCCTG TGCAGATCTAATAGT TERM 3900 3587116 - 3587101 - f 86 -11.8 -2.99649 | opp_overlap 3587092, overlap 3587099 ACAGTTTCAGACACA GGCCGG TTAG CCGGCC TGTGCAGATCTAATA recQ 3587146 - 3588978 + | ATP-dependent DNA helicase RecQ rhtC 3589085 - 3589705 + | threonine efflux system TERM 3901 3589701 - 3589751 + T 77 -11.1 -2.79007 | opp_overlap 3589718, overlap 3589701 3589740 AACTGATATTGTCCC GCTAACGGGTTAGCCAACGGGGT ATTTA ACCCGGTTGGCTAGCCTGACAGG CTCTTTATACTTTGC TERM 3902 3589701 - 3589752 + T 84 -10.9 -3.66216 | gap 1, opp_overlap 3589718, overlap 3589701 3589740 AACTGATATTGTCCC G-CTAACGGGTTAGCCAACGGGGT ATTTA ACCCGGTTGGCTAGCCTGACAGGC TCTTTATACTTTGCG rhtB 3590376 - 3589756 - | homoserine/homoserine lactone efflux protein TERM 3903 3591536 - 3591549 + G 71 -5.2 -4.56775 | overlap 3591527 GTGCCGAGGCGCTTA GCGC CATATT GCGC TTTTTCGCGCAACAT pldB2 3590572 - 3591585 + | lysophospholipase L2 cof3 3591491 - 3592429 + | putative sugar phosphatase TERM 3904 3592467 - 3592485 + F 95 -12.4 -3.28041 | TGATGCTGTGGAGTA GGGTGGCC TTT GGTCACCC TTCCTCCTTGGCGTT TERM 3905 3592889 - 3592878 - g 73 -3 -5.04908 | AAAATAAAAAAATAA CAAT AAAT ATTG CTGAGAAGAAATTTA TERM 3906 3593891 - 3593872 - g 87 -4.4 -5.41143 | gap 1 CATGGGTGAAAAAAA TCACTATCA GAA TG-TAGTGA GTCACGTTGAATAAT YP_3220 3592694 - 3593905 + | hypothetical protein glpQ 3595097 - 3593979 - | glycerophosphodiester phosphodiesterase glpA 3595719 - 3597374 + | sn-glycerol-3-phosphate dehydrogenase subunit A glpB 3597346 - 3598638 + | anaerobic glycerol-3-phosphate dehydrogenase subunit B glpC 3598635 - 3599930 + | sn-glycerol-3-phosphate dehydrogenase subunit C TERM 3907 3600081 - 3600057 - T 100 -13.6 -4.72631 | opp_overlap 3600061 3600078 AGTAAGTCAATAAAA CAGAGCGCGA GTGAA CCGCGCTCTG CTGGGACAGATTATT YP_3225 3600619 - 3600092 - | hypothetical protein YP_3226 3601417 - 3600749 - | hypothetical protein sirA2 3601701 - 3601955 + | cell developmental protein SirA zntA 3604421 - 3602055 - | zinc/cadmium/mercury/lead-transporting ATPase YP_3229 3605461 - 3604835 - | hypothetical protein YP_3230 3605751 - 3606071 + | hypothetical protein TERM 3908 3606376 - 3606364 - g 80 -3.3 -5.252 | TATTGGCAGAAAAAA CAGCA GGA TGCAG AAAATGATCGCGCAC YP_3231 3606283 - 3606702 + | hypothetical protein YP_3232 3607161 - 3606889 - | hypothetical protein TERM 3909 3607131 - 3607120 - G 78 -2.2 -5.32882 | overlap 3607121 3607123 CAGCAGTATAAAAAA CCAG ACGC CTAG CATCAGTAACCGGCC YP_3233 3607813 - 3607151 - | 16S rRNA m(2)G966-methyltransferase YP_3234 3608066 - 3607923 - | hypothetical protein TERM 3910 3608176 - 3608158 - g 85 -12.4 -3.70773 | overlap 3608169 CGTCAGAGTGAAGAA CCAGCAGC AGA GCCGCTGG CGACTGAAAAAGAAG TERM 3911 3609483 - 3609463 - g 80 -3.1 -5.26875 | opp_overlap 3609477, overlap 3609464 CGGGTAATGAAAAAA CTGGACGGC GAC GCCCCCCAT GAGGTTATGCTGACA ftsY 3608095 - 3609738 + | cell division protein ftsE 3609744 - 3610412 + | cell division protein FtsE ftsX 3610402 - 3611355 + | cell division protein FtsX TERM 3912 3612104 - 3612090 - g 71 -7.8 -4.09739 | opp_overlap 3612095, overlap 3612095 TCAACCTGCGTAAAA CCAAGC AGC GCCTGG GCTGGTTTAATCAGG rpoH 3611666 - 3612523 + | RNA polymerase factor sigma-32 TERM 3913 3612586 - 3612566 - f 93 -11.2 -4.11183 | opp_overlap 3612566 CGGCACGATAAAGAA GGGCGATA TTGAT TATCGCCC TTTTGCTGTGCCCAG TERM 3914 3612566 - 3612586 + F 100 -11.2 -4.34402 | opp_overlap 3612566 CGGCACGATAAAGAA GGGCGATA TTGAT TATCGCCC TTTTGCTGTGCCCAG TERM 3915 3612624 - 3612606 - f 100 -16 -4.36914 | opp_overlap 3612606 GCTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC TERM 3916 3612606 - 3612624 + F 100 -16 -3.07307 | opp_overlap 3612606 GCTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC tnp_36 3612686 - 3613195 + | transposase for the IS1541 insertion element TERM 3917 3613269 - 3613301 + T 100 -11.3 -5.41143 | opp_overlap 3613276, overlap 3613275 3613276 CCTTATAGGCGCATA TGAAAAACCTCCGGC TAT GCCGGAGGATATTTA TTTTTTTGGCAGATA TERM 3918 3613275 - 3613295 + T 100 -12.5 -4.21073 | opp_overlap 3613276, overlap 3613269 3613276 AGGCGCATATGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTTTTTTGG TERM 3919 3613294 - 3613276 - T 100 -16 -4.8048 | opp_overlap 3613276 3613275 3613269 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTTTTTG TERM 3920 3613276 - 3613294 + T 100 -16 -3.10203 | opp_overlap 3613276, overlap 3613275 3613269 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTTTTTG YP_3240 3613878 - 3613441 - | hypothetical protein TERM 3921 3613735 - 3613713 - G 70 -4.8 -4.73388 | opp_overlap 3613734 AACGTGCAGCAAAAA GTGGTCTACC CTC AGTAATCCAC TGTTGCCAGGCAGCA TERM 3922 3614622 - 3614603 - g 80 -12.2 -3.39717 | ATTTATGAAGATGAA GGGGTGAT AATG ATCACCCC TGCTGCTACAAACGC TERM 3923 3615260 - 3615249 - g 74 -7.2 -4.17023 | overlap 3615257 3615258 CTAACGATCTGAAAA CCGG CAAA CCGG TTGAGACCGTGATGG livK2 3614240 - 3615370 + | branched chain amino acid ABC transporter amino acid-binding protein TERM 3924 3615460 - 3615480 + F 100 -10.4 -4.70659 | CTTCTATCAACTGCA TCCCCTCG TATTC CGGGGGGA TTTTTCCCTCTACAG livH 3615551 - 3616477 + | branched-chain amino acid transporter permease subunit LivH TERM 3925 3617430 - 3617409 - g 73 -8.7 -3.71672 | CCCGACCAAAATTAA GCTGACGGC ATTT ACCATCAGC GCGGCCTTTGCAGGT livM 3616474 - 3617760 + | leucine/isoleucine/valine transporter permease subunit livG 3617757 - 3618524 + | leucine/isoleucine/valine transporter ATP-binding subunit livF 3618569 - 3619270 + | leucine/isoleucine/valine transporter ATP-binding subunit YP_3246 3619498 - 3619959 + | hypothetical protein YP_3247 3621180 - 3620074 - | hypothetical protein YP_3248 3621741 - 3621223 - | hypothetical protein TERM 3926 3621280 - 3621294 + g 79 -9.2 -4.13728 | TTTCCCCGCAGTATT GTCCCC AGC GGGGGC TTTTGCGGATATCTG YP_3249 3622465 - 3621803 - | hypothetical protein fimC9 3623141 - 3622422 - | hypothetical protein TERM 3927 3622955 - 3622969 + gr 72 -9.2 -3.22475 | opp_overlap 3622955, overlap 3622953 TGATATCCAGATAAA GCGGTG TAT CGCCGC TGTTATACACCTGCA TERM 3928 3622969 - 3622955 - GR 71 -7 -4.07868 | opp_overlap 3622955 3622953 TGATATCCAGATAAA GCGGTG TAT CGCCGC TGTTATACACCTGCA YP_3251 3625474 - 3623126 - | hypothetical protein TERM 3929 3624329 - 3624363 + g 87 -4.8 -5.49809 | overlap 3624331 TTGTACGCTTTCTAT CACCCTGCTGCGTCCA AAC TGGACTAAACGGGGCG TTTTTTTACCCTTTG TERM 3930 3625660 - 3625688 + r 71 -9 -3.4052 | gap 1, opp_overlap 3625660 3625662 3625664 AGTATGACAGATATA TACAGCCA-GGAG ATAA TTCCATGGCTGTA TTCATTAAATTAACA YP_3252 3626346 - 3625726 - | hypothetical protein TERM 3931 3626390 - 3626403 + H 70 -5.3 -4.55689 | TAACGTTATTTCAAG TGGTA ATTA TACCA TTTTGTCTGAATGAT TERM 3932 3627518 - 3627507 - g 100 -5.8 -5.5353 | opp_overlap 3627505 3627507 GATATGAATAAAAAA GGTG ATTT CACC TATTTTGGCCGTAAA ugpB5 3626772 - 3628091 + | glycerol-3-phosphate transporter periplasmic binding protein ugpA 3628389 - 3629276 + | glycerol-3-phosphate transporter permease TERM 3933 3629501 - 3629511 + G 76 -5.4 -4.81863 | CCTTTCGGGTTGATG CTGT TGA ACAG TTTTGTTATGGCTTT TERM 3934 3630050 - 3630065 + G 71 -6.8 -4.25256 | ATTTTGACTTTAATT CCACCG GTCG TGGTGG TTCTTTTGATGCAGC ugpE 3629273 - 3630118 + | glycerol-3-phosphate transporter membrane protein TERM 3935 3630781 - 3630755 - g 74 -7.9 -4.2461 | opp_overlap 3630778 ATTGTGATGAACAAA GGGGTTGCCGA GCAAA TCGGTACCCCC AGCGAGGTTTATAAA TERM 3936 3631068 - 3631090 + G 70 -9.8 -3.32844 | CGCACGGCCTGTGGG GCGGGCAAAG TAT CATTGCTCGC TTATCCCATGAAGAA TERM 3937 3631117 - 3631107 - g 71 -6.8 -4.25056 | opp_overlap 3631106, overlap 3631108 TATCCCATGAAGAAA TGCC AGT GGCA GGCAGTACATTGCAT ugpC 3630125 - 3631198 + | glycerol-3-phosphate transporter ATP-binding subunit ugpQ 3631195 - 3631944 + | cytoplasmic glycerophosphodiester phosphodiesterase TERM 3938 3632020 - 3631986 - f 85 -5.7 -5.18726 | CCGCCATAATAAAAA CAGGTCAGCCATT CTTACATTT ACGGGCTGACCTG GCCCGGCCTGACAGG YP_3258 3632045 - 3633001 + | putative inner membrane permease TERM 3939 3633467 - 3633479 + GT 70 -3.3 -4.89729 | overlap 3633457 GATGCGTGTCGGGCT GGCCG CAC TGGTC TTTTTGCCTTTTCTG metR 3635094 - 3634141 - | LysR family transcriptional regulator rhaT13 3633321 - 3634253 + | hypothetical protein metE 3635200 - 3637476 + | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase TERM 3940 3637511 - 3637526 + T 100 -11.8 -5.52096 | GTAGTGGGGCTTTTG GGGCGC TTTC GCGCCC TTTTTTATTGCGTTT YP_3262 3638403 - 3637531 - | putative carboxymethylenebutenolidase TERM 3941 3637785 - 3637770 - G 70 -10.4 -2.88544 | CTTTACCTCCATATA GCCCCA ACAC TGGGGC GCAGAGATCGATAGC TERM 3942 3638019 - 3638007 - G 76 -7.7 -4.29738 | opp_overlap 3638006 CGAGATCCACCAAAA CCTGA CGA TCAGG GACTTTTTTTACCAG udp 3638831 - 3639592 + | uridine phosphorylase TERM 3943 3639626 - 3639645 + F 100 -11.4 -4.36862 | TAGAGGGTTTGTTCT CGGGTCAG TTTA CTGGCCCG TTCTTTATTTCATCT YP_3264 3639713 - 3640543 + | hypothetical protein TERM 3944 3640959 - 3640978 + G 95 -6.4 -5.5112 | overlap 3640961 GTATCCTTACGATCT GCTACCGT TTAT ACGGTATC TTTTTTGTTCGTAAG TERM 3945 3640961 - 3640976 + G 76 -7.6 -4.39002 | overlap 3640959 ATCCTTACGATCTGC TACCGT TTAT ACGGTA TCTTTTTTGTTCGTA TERM 3946 3641730 - 3641743 + G 76 -8.1 -4.15222 | CTGAAATTCAATTCC CTGCG GTTA CGCAG TTTATTCACGGCGGT TERM 3947 3642446 - 3642462 + G 77 -12.3 -3.10895 | GCCACGATTATCCTG CGCTTGG CGA CCAAGCG TGTGTATATGTTGAC cstA2 3640901 - 3642718 + | putative carbon starvation protein TERM 3948 3642747 - 3642774 + F 100 -13.6 -5.5074 | opp_overlap 3642751 TTGTGCTAATTTGTT TAAACGGCTGGA ATCT TCTAGCCGTTTA TTTTTTGTTAAGTTA TERM 3949 3643330 - 3643343 + G 74 -2.3 -5.07107 | overlap 3643340 TCTTCGAGCGTTGGG GGTTC TTTG GGGCC TTTTTTGGCCGTTTC dedA4 3642951 - 3643520 + | hypothetical protein rumC 3643728 - 3645233 + | putative DNA recombination protein TERM 3950 3645242 - 3645266 + F 72 -7.7 -3.75015 | AGAGTAATTTAATTG GCACCGCAACC AGG GGGTGTGGGGC TTTCATCGGAGTTCT ubiE 3645325 - 3646080 + | ubiquinone/menaquinone biosynthesis methyltransferase YP_3269 3646043 - 3646744 + | hypothetical protein TERM 3951 3648113 - 3648100 - g 71 -5.2 -4.48449 | overlap 3648096 3648094 GCATTAAAAGAGAAA GCCC CTTTCT GGGC TGAAAAATTCCCTGA ubiB 3646744 - 3648375 + | putative ubiquinone biosynthesis protein UbiB tatA 3648555 - 3648821 + | Sec-independent protein translocase protein TatA tatB 3648825 - 3649487 + | Sec-independent protein translocase protein TatB TERM 3952 3649563 - 3649577 + G 81 -6.4 -4.98436 | opp_overlap 3649563 3649564, overlap 3649564 TACTGAATTGTATAA TCACCA TTT TGGTGG TTTTTCTGGTATTGG tatC 3649490 - 3650266 + | TatABCE protein translocation system subunit TERM 3953 3650287 - 3650302 + F 100 -11.8 -4.45168 | TGCGTTGATATTTAG CCGCCC TTCT GGGCGG TTTCTGTTTTGGAAC TERM 3954 3650866 - 3650884 + F 100 -13.2 -4.01078 | CCAGGGGGTAATCTG CTCTCCTG ATT CAGGAGAG TTTATGGTCACTTTT YP_3275 3650888 - 3651910 + | transposase for insertion sequence IS100 TERM 3955 3651991 - 3651977 - g 77 -11.4 -3.3506 | overlap 3651968 TGGAAAGCCTTATAA GCGCAG CGC CTGCGC TGTCACAACAGGCAG dnaC_24 3651907 - 3652689 + | transposase/IS protein TERM 3956 3653038 - 3653058 + F 86 -10.3 -3.75153 | opp_overlap 3653037 3653036 3653038 AAACTGATGAAAACG CCCGCCGGG TTT TCCGGCTGG TTTGAGTTAGGAGAA hemB 3653078 - 3654100 + | delta-aminolevulinic acid dehydratase TERM 3957 3654122 - 3654160 + T 73 -8.9 -3.56273 | opp_overlap 3654126 3654134, overlap 3654123 3654126 ATAACTAAGAGTCAC AGCATTCAGATAGGCAC TAACT GCGCCTATCTGAATGAA TTCTATAATGATGAG TERM 3958 3654123 - 3654159 + T 88 -12.4 -2.73443 | opp_overlap 3654126 3654134, overlap 3654122 3654126 TAACTAAGAGTCACA GCATTCAGATAGGCAC TAACT GCGCCTATCTGAATGA ATTCTATAATGATGA TERM 3959 3654126 - 3654156 + T 88 -12.7 -2.64051 | opp_overlap 3654126 3654134, overlap 3654123 3654122 CTAAGAGTCACAGCA TTCAGATAGGCAC TAACT GCGCCTATCTGAA TGAATTCTATAATGA TERM 3960 3654156 - 3654126 - T 100 -14.9 -2.66787 | opp_overlap 3654126 3654123 3654122, overlap 3654134 CTAAGAGTCACAGCA TTCAGATAGGCAC TAACT GCGCCTATCTGAA TGAATTCTATAATGA rfaH 3654698 - 3654210 - | transcriptional activator RfaH ubiD 3654946 - 3656442 + | 3-octaprenyl-4-hydroxybenzoate decarboxylase fre 3656497 - 3657198 + | FMN reductase TERM 3961 3657227 - 3657211 - T 82 -5.7 -4.97402 | overlap 3657212 TAAAAGCGATAAAAA GCCCGCC TCT GACCGGC GGGGAAATAGCAACT TERM 3962 3657230 - 3657212 - T 73 -8.8 -3.56814 | overlap 3657211 AAAAGCGATAAAAAG CCCGCC TCTGACC GGCGGG GAAATAGCAACTAAA fadA 3658521 - 3657358 - | 3-ketoacyl-CoA thiolase TERM 3963 3658478 - 3658460 - G 79 -8 -4.33274 | CGTACATGACGAAAA GCCCCCCC TTT GGAGCGGC CCATCGGTGTACGCA fadB 3660722 - 3658533 - | multifunctional fatty acid oxidation complex subunit alpha TERM 3964 3658574 - 3658562 - G 70 -9.1 -3.50335 | TGGTAGAAACATCAA GCAGC GCT GCTGC CACAGGATAATAACT TERM 3965 3659259 - 3659272 + g 74 -8.1 -4.05033 | opp_overlap 3659258 3659255 ATCATTGACAACAAT TGGGG TTTT CCCCA TTTGTGTAGCGTAAG TERM 3966 3660460 - 3660443 - G 76 -8.5 -4.1899 | opp_overlap 3660454 3660455, overlap 3660458 CCAGTCGATTGAAAA TGGTGTT GGCG AACACCA GCCACTGGTGCAGTT TERM 3967 3661003 - 3660977 - H 79 -8 -4.31835 | opp_overlap 3660978, overlap 3660978 AATTTGTAGAATAAA CGTCATCGAAAC ATG GTTTCGGTGACT ATGATAAGATAAAAA TERM 3968 3660978 - 3661002 + H 93 -13.7 -2.79796 | opp_overlap 3660978 3660977 ATTTGTAGAATAAAC GTCATCGAAAC ATG GTTTCGGTGAC TATGATAAGATAAAA TERM 3969 3661002 - 3660978 - H 84 -11.5 -3.18378 | opp_overlap 3660978, overlap 3660977 ATTTGTAGAATAAAC GTCATCGAAAC ATG GTTTCGGTGAC TATGATAAGATAAAA TERM 3970 3661136 - 3661169 + G 74 -2.6 -5.1356 | overlap 3661136 3661137 CGTCATCAATTAGAT G-CGTTGCTGATTCAC TCTG GTGAATTA-CAGCGGC TTTTTCTTGATGACC pepQ 3661046 - 3662380 + | proline dipeptidase TERM 3971 3662524 - 3662543 + G 100 -11.4 -4.64676 | opp_overlap 3662522 3662518 CAACAACATCCAACG GCCCGGCA TCAT TGCTGGGC TTTTGTTGCCGGTCC YP_3284 3662380 - 3662991 + | hypothetical protein TERM 3972 3663271 - 3663290 + G 95 -5 -5.55769 | TTTTGGACGGTGTTG GGTAGTGT CGGG GCATTACC TTTTTTATTCTCAGA TERM 3973 3663562 - 3663551 - g 81 -5.8 -4.95302 | opp_overlap 3663551 TGAAAGATAATAAAA TGCG GCCC CGCA TTGCTGAAACGGCTA trkH 3663031 - 3664482 + | potassium transporter hemG 3664504 - 3665037 + | protoporphyrinogen oxidase YP_3287 3665497 - 3665321 - | hypothetical protein TERM 3974 3665767 - 3665757 - H 74 -6.8 -4.27316 | opp_overlap 3665757 TCTCTCAATTCAAAA CACC TTC GGTG TTGTAAGGTTAAGCC TERM 3975 3666879 - 3666890 + H 74 -4.4 -5.06816 | CCACTTTCGTGTTTG CACA GTGC TGTG TTTTTATTAAACAGT TERM 3976 3666926 - 3666952 + H 70 -9.4 -2.75844 | opp_overlap 3666902 3666904, overlap 3666925 3666928 CCAGCTGGTATCTGC GACTGGCTTCAG CTC CAGGAGCTAGTC CTTTCACCTAACGCC TERM 3977 3667386 - 3667404 + H 82 -10.3 -3.57798 | overlap 3667379 CTTGGTCTTCCGGCG TGCGGGT TTTTC ACCCGCA TTATCGTTACTTATG TERM 3978 3670755 - 3670721 - H 78 -9.2 -3.62597 | opp_overlap 3670728 GCCAGCGTTCAATAA GCCAAGACCCCATGCC CAA AGCGTGGGGTTTTTGC TGTGCGCGAAACACA TERM 3979 3670728 - 3670748 + H 100 -10.4 -4.8048 | opp_overlap 3670721 TTCAATAAGCCAAGA CCCCATGC CCAAA GCGTGGGG TTTTTGCTGTGCGCG murB 3671174 - 3672211 + | UDP-N-acetylenolpyruvoylglucosamine reductase birA 3672208 - 3673167 + | biotin--protein ligase TERM 3980 3673194 - 3673177 - T 71 -9.9 -2.63723 | opp_overlap 3673174 3673172 3673169, overlap 3673176 GTCTGATTAATTAAT GGGAGAT AACT ATCTCCC GTATAGATTATTTTC coaA 3674152 - 3673202 - | pantothenate kinase TERM 3981 3673703 - 3673717 + g 100 -8.6 -5.5604 | opp_overlap 3673703 ATTATGCATATCATA GGATTC CGG GAATCC TTTTTTCTTCATTAG TERM 3982 3674022 - 3674046 + g 73 -5.7 -4.55093 | TCTAATGAAAGGTCT TCGTTAATCCC TTT GAGTTTAACGA TTTCTTCTTCTGTCA TERM 3983 3674216 - 3674242 + r 91 -8 -4.8048 | opp_overlap 3674217, overlap 3674217 AACTCCAGATAAGAA ACAAGCTGCATA TTA TAGGCAGCTTGG TTTTTGGTGTAGACA TERM 3984 3674241 - 3674217 - R 100 -11.5 -4.39329 | opp_overlap 3674216 3674217 ACTCCAGATAAGAAA CAAGCTGCATA TTA TAGGCAGCTTG GTTTTTGGTGTAGAC TERM 3985 3674217 - 3674241 + r 89 -11.5 -3.47806 | opp_overlap 3674217, overlap 3674216 ACTCCAGATAAGAAA CAAGCTGCATA TTA TAGGCAGCTTG GTTTTTGGTGTAGAC wecD3 3674914 - 3674363 - | putative acetyltransferase TERM 3986 3674982 - 3675000 + H 100 -13.2 -4.01078 | CCAGGGGGTAATCTG CTCTCCTG ATT CAGGAGAG TTTATGGTCACTTTT YP_3293 3675004 - 3676026 + | transposase for insertion sequence IS100 TERM 3987 3676107 - 3676093 - g 77 -11.4 -3.3506 | overlap 3676084 TGGAAAGCCTTATAA GCGCAG CGC CTGCGC TGTCACAACAGGCAG dnaC_25 3676023 - 3676805 + | transposase/IS protein TERM 3988 3677338 - 3677320 - T 77 -11 -2.73735 | overlap 3677310 3677308 3677331 AAACAGGCGGAATGA GTCCGGCA GAA TACCGGAC TCAGGTAGAAAAGCA TERM 3989 3677414 - 3677392 - T 71 -9 -3.32844 | GGGTTCAGTGCATAA GCGTGGCCCC CTT GGAACCCCGC GCTTTCGCACTATCG YP_3296 3678143 - 3677712 - | hypothetical protein TERM 3990 3678130 - 3678154 + g 74 -7.9 -4.22524 | GAAACACGGTCACTA CGCGAGAAAAA CAA TTTTATTCGCG TTTCATTTTAACTAT YP_3297 3678625 - 3678146 - | hypothetical protein YP_3298 3679293 - 3678919 - | hypothetical protein TERM 3991 3678991 - 3678980 - G 87 -4.4 -5.45813 | GATGAAAAAATAAAA GGTA TTAA TACC GCAATAAAAACCCCA TERM 3992 3680401 - 3680382 - g 72 -8.6 -3.90291 | gap 1, opp_overlap 3680399 ATCCGCCTAATTAAA GGCAGCCAC ATT GTGG-TGCC TCGGGTTCATAACCA TERM 3993 3680854 - 3680839 - g 71 -6.8 -4.2558 | gap 1 CAGCGTGGACTAAAA CCGGTGC CTT GC-CCGG TGGGGATATCGGCGG TERM 3994 3681194 - 3681180 - g 70 -4.2 -4.70659 | opp_overlap 3681183 GCGCACACTGAAAAA CAACAG GCG CTGCCG CTGGTTTCTTAATAG glpD 3679692 - 3681206 + | glycerol-3-phosphate dehydrogenase TERM 3995 3681295 - 3681324 + T 73 -3.6 -5.0538 | gap 2, opp_overlap 3681295 CAAGAAATTTAAAAA CCCTCTTCAATCGG ATAA CCGC--GAAGAGGG TTTTTTACGGTGGCA TERM 3996 3681324 - 3681295 - T 78 -5.8 -4.86939 | gap 2, opp_overlap 3681295 CAAGAAATTTAAAAA CCCTCTTCAATCGG ATAA CCG-C-GAAGAGGG TTTTTTACGGTGGCA glgP 3683888 - 3681369 - | glycogen phosphorylase TERM 3997 3682046 - 3682036 - G 72 -8.2 -3.84406 | opp_overlap 3682036 TTGGCATTATAATAA GCCG AGG CGGC TTTACCGGCAAAAAT TERM 3998 3682398 - 3682423 + g 100 -11.1 -4.63218 | opp_overlap 3682401, overlap 3682376 GTTGGCTAACCCCAA CCAGCGCCGTG GTGT CACGCCGTTGG TTTTATTGCAGAAAC glgA 3685421 - 3683985 - | glycogen synthase glgC 3686913 - 3685483 - | glucose-1-phosphate adenylyltransferase glgX 3688911 - 3686923 - | glycogen debranching enzyme TERM 3999 3687023 - 3687007 - G 74 -10.1 -3.63627 | GTCTGACACCCCAAA GGGAGGA ATC CCCTCCC ATTCCCCTTCAGGTA glgB 3691096 - 3688913 - | glycogen branching enzyme YP_3305 3691602 - 3693299 + | hypothetical protein TERM 4000 3693405 - 3693372 - T 75 -5.4 -4.90296 | opp_overlap 3693370 3693373 3693376, overlap 3693373 3693376 AAAACCCTATAAAAA TTAATGCCAGAG TATAACCCAC CTCTGGCATTAC TATTATTCCTGACAC TERM 4001 3693404 - 3693373 - T 73 -8.9 -3.52551 | opp_overlap 3693373 3693370 3693376, overlap 3693372 3693376 AAACCCTATAAAAAT TAATGCCAGAG TATAACCCAC CTCTGGCATTA CTATTATTCCTGACA YP_3306 3702833 - 3693507 - | putative invasin TERM 4002 3698460 - 3698439 - G 72 -8 -3.90112 | GTTGGCCGAACTAAA GACCACCG CAGCAC CGGTGATC GGGTTGCCGTTAGCA TERM 4003 3699039 - 3699018 - G 72 -8 -3.90112 | GTTGGCCGAACTAAA GACCACCG CAGCAC CGGTGATC GGGTTGCCGTTAGCA TERM 4004 3699618 - 3699597 - G 72 -8 -3.90112 | GTTGGCCGAACTAAA GACCACCG CAGCAC CGGTGATC GGGTTGCCGTTAGCA TERM 4005 3703750 - 3703734 - H 75 -3.1 -5.08824 | TCTTCACGCAAAAAA TAAAAAA CCA TTTTCTA TACGGCATTCAATTT TERM 4006 3704079 - 3704060 - H 100 -10 -5.63645 | opp_overlap 3704060 3704058 3704053 TTAAAATATAAAAAA CCCTGACC ATAA GATCAGGG TGCTTTGTTGTTCTT YP_3307 3704137 - 3704478 + | hypothetical protein YP_3308 3704856 - 3704569 - | hypothetical protein YP_3309 3705162 - 3704863 - | hypothetical protein YP_3310 3705759 - 3705478 - | hypothetical protein TERM 4007 3705886 - 3705869 - R 100 -9.8 -4.60949 | CATACGATAAACAAA GCCCGC ACTCTG GCGGGC TTACGGGTCTTCCAC asd2 3707031 - 3705928 - | aspartate-semialdehyde dehydrogenase TERM 4008 3707405 - 3707421 + G 79 -5.1 -4.93968 | overlap 3707407 TGACTGAGATGATTG CAGCAAC TGT GTTGCTA TTTTTAATTATGGAT TERM 4009 3707407 - 3707419 + G 71 -7.7 -4.08682 | overlap 3707405 ACTGAGATGATTGCA GCAAC TGT GTTGC TATTTTTAATTATGG marC3 3707398 - 3707982 + | dITP- and XTP- hydrolyzing protein TERM 4010 3708067 - 3708053 - T 80 -2.8 -5.47399 | opp_overlap 3708053, overlap 3708066 TCAACGTCAAAAAAA CCAATT CAA AATGGG TCTTTGACTGCTGAC TERM 4011 3708199 - 3708212 + T 79 -8.1 -4.3534 | opp_overlap 3708193 TGTCAATAACCTCAA GCCTC TTCT GAGGC TTTTAATAATTAGAC YP_3313 3708626 - 3708222 - | hypothetical protein TERM 4012 3708249 - 3708259 + g 80 -3.2 -5.3671 | ATCATCAGGGTAAGC GGCT TTG AGTC TTTTTTGCTTGTCTT YP_3314 3709230 - 3708997 - | hypothetical protein gntV 3709915 - 3709412 - | putative gluconokinase gntT1 3710165 - 3711448 + | putative gluconate permease gntR1 3712535 - 3711540 - | gluconate utilization system Gnt-I transcriptional repressor TERM 4013 3712609 - 3712586 - R 82 -6 -4.93877 | gap 1, opp_overlap 3712586, overlap 3712581 TTCTAGCAAAGAAAA GGGTATAGCGC GAT GTGC-ATACCC TTTTTAGTTAACGTA TERM 4014 3712586 - 3712609 + r 100 -8.2 -4.87291 | gap 1, opp_overlap 3712586 3712581 TTCTAGCAAAGAAAA GGGTATAGCGC GAT GTGC-ATACCC TTTTTAGTTAACGTA YP_3318 3713359 - 3712664 - | hypothetical protein YP_3319 3713712 - 3713488 - | hypothetical protein TERM 4015 3713600 - 3713584 - G 100 -9.4 -6.17292 | AAAGGCAAAAAAAAA GCCAGC ACCCG GCTGGC TAAGTAAACACTGGA YP_3320 3713854 - 3714123 + | hypothetical protein ompR4 3714123 - 3714842 + | putative response regulator protein rbsK4 3716034 - 3715027 - | PfkB family carbohydrate kinase TERM 4016 3715559 - 3715542 - G 76 -12.7 -2.62933 | overlap 3715530 CAAGCTGCGACATCA GCGCCAG TAGT CTGGCGC TACGAGTACCGTACT fba 3716904 - 3716044 - | hypothetical protein YP_3324 3717613 - 3716930 - | hypothetical protein rbsB9 3718632 - 3717688 - | sugar-binding transport protein rbsC2 3719655 - 3718663 - | sugar transport system permease protein TERM 4017 3719613 - 3719588 - G 77 -9.9 -3.72695 | opp_overlap 3719607, overlap 3719599 ACGGTTTGCAGTAAA TCGCTAAAAAA CGCT TTTTTCAGCGA GGCCGATTTTGCCAC TERM 4018 3719612 - 3719599 - G 78 -3.8 -5.07107 | opp_overlap 3719607, overlap 3719588 TAAATCGCTAAAAAA CGCT TTTTTC AGCG AGGCCGATTTTGCCA rbsA3 3721171 - 3719648 - | sugar transport ATP-binding protein TERM 4019 3721519 - 3721497 - g 71 -6.3 -4.37658 | gap 1 AAGCCGCTTACAAAA GCAG-GTCCA GGAG CGGACACTGC GCGATATGTCAAGCA baeS9 3721360 - 3723915 + | putative hybrid two-component system regulatory protein YP_3329 3725433 - 3724051 - | hypothetical protein TERM 4020 3724946 - 3724958 + g 76 -3.3 -5.14563 | opp_overlap 3724947, overlap 3724947 GAATCATCACAAAAA AGCTG CCC CAGCG TTTTTTCATGCCAGG TERM 4021 3724957 - 3724947 - G 100 -6.8 -5.33785 | opp_overlap 3724947 3724946 AATCATCACAAAAAA GCTG CCC CAGC GTTTTTTCATGCCAG pitA 3725459 - 3727054 + | phosphate ABC transporter permease TERM 4022 3727170 - 3727150 - f 100 -8.9 -5.15167 | opp_overlap 3727150 GATGAGCAATAAAAA GGCGGCCTA AAT CAGGTCGCC TTTTTTGTGCCCAGA TERM 4023 3727150 - 3727170 + F 100 -10.4 -5.24129 | opp_overlap 3727150 GATGAGCAATAAAAA GGCGGCCT AAATC AGGTCGCC TTTTTTGTGCCCAGA TERM 4024 3727189 - 3727207 + F 100 -16 -3.07307 | opp_overlap 3727189 TTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC TERM 4025 3727207 - 3727189 - f 100 -16 -4.36914 | opp_overlap 3727189 TTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC tnp_37 3727269 - 3727778 + | transposase for the IS1541 insertion element TERM 4026 3727856 - 3727880 + T 100 -9.9 -4.43642 | opp_overlap 3727859, overlap 3727858 3727859 ATAGGCGCATATGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTAATTCTTTT TERM 4027 3727858 - 3727878 + T 100 -12.5 -3.78931 | opp_overlap 3727859, overlap 3727856 3727859 AGGCGCATATGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTAATTCTT TERM 4028 3727859 - 3727877 + T 100 -16 -2.85732 | opp_overlap 3727859, overlap 3727858 3727856 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTAATTCT TERM 4029 3727877 - 3727859 - T 100 -16 -4.8048 | opp_overlap 3727859 3727858 3727856 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTAATTCT uspB 3728273 - 3727911 - | universal stress protein UspB uspA2 3728954 - 3729400 + | universal stress protein A TERM 4030 3729448 - 3729428 - f 78 -9.6 -3.67976 | opp_overlap 3729428 TTGAGTAACGTTAAA CGCTCGCC TCTCC GGCGGGCG TTTTTGTGATAGACG TERM 4031 3729428 - 3729448 + F 100 -11.8 -4.91109 | opp_overlap 3729428 TTGAGTAACGTTAAA CGCTCGCC TCTCC GGCGGGCG TTTTTGTGATAGACG TERM 4032 3730213 - 3730201 - g 74 -4.9 -4.77036 | TGGCATGATGAAAAA GTTAT CCA ATAAC ACCGCTTGCGTCTTT gdhA 3729644 - 3730990 + | glutamate dehydrogenase YP_3335 3731235 - 3732572 + | metalloprotease TERM 4033 3732647 - 3732632 - T 70 -6 -4.37092 | overlap 3732633 ATTCGGGTGAGAAAA TGCCGC TAAC GCGGCG GCGTCACCGATGAAG TERM 4034 3732646 - 3732633 - T 72 -9.5 -3.21934 | overlap 3732632 TTCGGGTGAGAAAAT GCCGC TAAC GCGGC GGCGTCACCGATGAA smtA9 3733407 - 3732637 - | putative methyltransferase TERM 4035 3733354 - 3733371 + g 82 -14.1 -2.74012 | opp_overlap 3733354 AGCCAGAATAGATAA GGCGCCG GGAT CGGCGCC TGCTTCAGATAATAA TERM 4036 3733371 - 3733354 - G 93 -14.1 -3.7319 | opp_overlap 3733354 AGCCAGAATAGATAA GGCGCCG GGAT CGGCGCC TGCTTCAGATAATAA opdA 3735453 - 3733411 - | oligopeptidase A YP_3338 3735599 - 3735754 + | hypothetical protein TERM 4037 3736303 - 3736293 - g 71 -5.4 -4.58773 | CGTATGAAATGAAAA CTGA TTA TCAG GATGTGGTGAAAGGT YP_3339 3735782 - 3736624 + | hypothetical protein TERM 4038 3737530 - 3737520 - g 70 -4.6 -4.7254 | overlap 3737506 3737521 3737522 AGCGGTTATCAAAAA CGCC GAT GGCA GCCTGACGCTGCAAT TERM 4039 3737756 - 3737768 + G 82 -10.5 -3.86524 | overlap 3737767 CCCCGGTTGCCGTTG CGGCG GGC CGCCG TTTGTCCGAACGTCT gor 3736780 - 3738162 + | glutathione reductase TERM 4040 3738172 - 3738209 + F 95 -11.3 -3.89524 | gap 1, opp_overlap 3738163, overlap 3738174 AGATGATTTCGTTAC TATGGCCCGAACAGGCAG AGA CT-CCTGCACGGGCCATG TTTCTGAAATACACT TERM 4041 3738174 - 3738207 + F 89 -11.7 -3.53733 | gap 1, opp_overlap 3738163, overlap 3738172 ATGATTTCGTTACTA TGGCCCGAACAGGCAG AGA CT-CCTGCACGGGCCA TGTTTCTGAAATACA TERM 4042 3738227 - 3738253 + F 75 -5.9 -4.70583 | opp_overlap 3738227 TCTGAAATACACTAA GCCAGGTTG AAAATGAGC TAACCTGGC TTTTATCTTAATAGA TERM 4043 3739042 - 3739057 + G 71 -6 -4.36262 | opp_overlap 3739036, overlap 3739041 TGCGCAAATTGTATG CGCTGC TACA GCCGCG TTTTAGTCTGAATAT YP_3341 3738354 - 3739481 + | putative regulatory protein gntT2 3739659 - 3740927 + | GntP family permease glxK 3740938 - 3742074 + | putative glycerate kinase TERM 4044 3742210 - 3742179 - T 70 -7.2 -3.74872 | opp_overlap 3742177 3742206, overlap 3742181 AGGGACTTTATCAAA TACCGACGGTCAGA TATC TCTGGCCGTTGGGA CATCCTATTTTCCAC TERM 4045 3742208 - 3742181 - T 78 -9.8 -3.4582 | opp_overlap 3742177 3742206, overlap 3742179 GGACTTTATCAAATA CCGACGGTCAGA TATC TCTGGCCGTTGG GACATCCTATTTTCC YP_3344 3742826 - 3742320 - | hypothetical protein YP_3345 3743391 - 3742894 - | hypothetical protein TERM 4046 3743380 - 3743390 + g 82 -4 -5.24291 | TAAGATATTGTATTT TGTT TTT AACA TTTTATTTTCGTTTT YP_3346 3744262 - 3743393 - | hypothetical protein TERM 4047 3743734 - 3743768 + g 71 -5.3 -4.52589 | gap 1 TCATCATTCCTTTGT TATTGATAGG-ATAAT GACC ATTATTCCAATCAATA TTTTCTATCAAAGCA TERM 4048 3744337 - 3744313 - R 100 -12.1 -3.80625 | CCGTCATAACGCAAA GCGGCATCCAG TAA CAAGATGCCGC CCCAAATCATTATCA yapE 3747604 - 3744350 - | putative autotransporter protein TERM 4049 3745039 - 3745049 + g 79 -6.8 -4.63527 | opp_overlap 3745023, overlap 3745023 3745022 CGCCAGTCACTTGAG TGCC TGC GGCA TTTTTGGCCTGATAG TERM 4050 3746429 - 3746441 + g 73 -2.7 -5.0538 | GTTATTCCCTTTAGT TATCA CCG TGGTA TTTTTTACGATAGCG TERM 4051 3748346 - 3748330 - g 83 -5.1 -5.08011 | AAAACCGGCAAAAAA GCCATCT CTC ATATGGC CTGCCTCAGTGATCG TERM 4052 3749022 - 3749011 - g 85 -3.6 -5.4756 | AAGCCGAAGAAAAAA GCGC TGTT ACGC GGAGCCCTCATTGCC rbn2 3748240 - 3749322 + | hypothetical protein TERM 4053 3750002 - 3750014 + G 76 -3.3 -5.1861 | TGGCAATAACCGCAC TACCC TCT GGGGA TTTTTTACTGCTGGC cdh 3749326 - 3750123 + | CDP-diacylglycerol pyrophosphatase asmA2 3752316 - 3750100 - | hypothetical protein TERM 4054 3751892 - 3751874 - G 70 -9.6 -3.33151 | overlap 3751872 CGTTGCAAATGAATA TCTGGCTG CGT CAGCCAAA GGCGGGGGATACGAA TERM 4055 3752610 - 3752595 - R 80 -9 -3.98159 | CAGGAGAAGATGAAA GGCGAT CATT ATCGCC TTAGGGAGCGTTAGC rtn3 3753466 - 3752621 - | EAL domain-containing protein YP_3352 3753550 - 3753885 + | hypothetical protein TERM 4056 3753958 - 3753940 - f 79 -3.2 -5.34555 | opp_overlap 3753941, overlap 3753933 3753941 TTACATCATAAAAAA TTTAAAAC ACC GTTTTAAT CCTATTGACTCTGGA kdgK 3754164 - 3755108 + | 2-dehydro-3-deoxygluconokinase TERM 4057 3755195 - 3755140 - T 86 -11.3 -3.38991 | gap 1, opp_overlap 3755148 3755194, overlap 3755138 AGGCCGCGAATAACA GACGTTAA-TGACCGATCGTTGCAGG ATAAA CCTACAGCCATCGGTCATTTTACGCC TGGCTAACGTGGCCT TERM 4058 3755148 - 3755186 + T 100 -12.5 -4.11692 | opp_overlap 3755140 3755138 AATAACAGACGTTAA TGACCGATCGTTGCAGG ATAAA CCTACAGCCATCGGTCA TTTTACGCCTGGCTA pqqL 3756771 - 3755272 - | insulinase family protease TERM 4059 3755610 - 3755632 + g 86 -7 -5.05601 | TACGCGCATAGGTGG CGAACAACTT ACT GAGTTGGTCG TTTTTCTGTGTCATC TERM 4060 3756246 - 3756215 - G 74 -8.6 -4.00042 | opp_overlap 3756218, overlap 3756218 TGGCCGATTAAAGAA GAACCTTTGAGGCG ATAA CGCCACCACGGTTC CTGAATATTTTGTGG TERM 4061 3756548 - 3756536 - G 73 -9.1 -3.77464 | opp_overlap 3756535 3756529 3756527 AGACGAGGCAGTAAA TGGGC AAA GCCCA CTTCCTGTGTATTTT TERM 4062 3757093 - 3757063 - R 100 -17.7 -2.9294 | overlap 3757081 GACATTATGCAGAGA CGCTACCAGTGAC AGCAA GCCACTGGTAGCG AATTGAAGGGAGAAA dctA 3758425 - 3757136 - | C4-dicarboxylate transporter DctA TERM 4063 3758826 - 3758855 + r 76 -10.7 -2.71791 | opp_overlap 3758824 3758820, overlap 3758825 GGGATAGAACTTACA GGCTCCTGTGCAA TAAC TAGCACAGGAGCG GTTTACGGCAGCGAT YP_3356 3759386 - 3758880 - | hypothetical protein TERM 4064 3758997 - 3759021 + g 70 -2.8 -4.84017 | opp_overlap 3759006, overlap 3758998 ATATTTGGCGTTGAT AGGCGAAAAG GTCAA CTTTTCACCC TTTTTGTCCGCAGTT pelY 3761202 - 3759484 - | periplasmic pectate lyase precursor TERM 4065 3761399 - 3761376 - R 72 -9.5 -3.14344 | opp_overlap 3761376 3761389 3761394 GACTCGGCCCATCAA GGGGCCTCG CCTCTT CGAGGCCGC AGCAAGCAGCCTTCC YP_3358 3762152 - 3761448 - | hypothetical protein rtn4 3764978 - 3762792 - | biofilm formation regulator HmsP dppF 3767415 - 3766339 - | dipeptide transporter ATP-binding subunit dppD 3768392 - 3767412 - | dipeptide transporter ATP-binding subunit dppC4 3769308 - 3768406 - | dipeptide transporter dppB4 3770337 - 3769390 - | dipeptide transport system permease protein TERM 4066 3770361 - 3770386 + r 75 -8.9 -3.64487 | opp_overlap 3770360 3770361 CTCTCTGTGTAGAAT GCCGGGCTGCT CATA GGCAACCTGGC TTATTAAACCTCTCC TERM 4067 3770605 - 3770572 - R 73 -5.9 -4.50159 | overlap 3770574 TTTAACCTAAATAAA TAGACCGATGAACGT TGAT ACGCACACCGGTCCG GTATAAGGGTAAAAT TERM 4068 3770603 - 3770574 - R 88 -10.7 -3.8535 | overlap 3770572 TAACCTAAATAAATA GACCGATGAACGT TGAT ACGCACACCGGTC CGGTATAAGGGTAAA dppA 3772227 - 3770620 - | periplasmic dipeptide transport protein YP_3366 3772878 - 3772630 - | hypothetical protein fhaC4 3774659 - 3772896 - | putative hemolysin activator protein TERM 4069 3774732 - 3774711 - R 70 -3.7 -4.90918 | overlap 3774706 ACAAAATCAATAAAA GTTAGCCAC GAAA GCAACTAAC TTTAAATAAAAAATC fhaB4 3776159 - 3774768 - | hypothetical protein TERM 4070 3776442 - 3776461 + r 100 -13.6 -3.78904 | opp_overlap 3776442 AATGGCACAAAAAAA CCCTGACG TTAC CGTCAGGG TTCTTAAATTTGGTC TERM 4071 3776461 - 3776442 - R 100 -13.6 -5.63504 | opp_overlap 3776442 AATGGCACAAAAAAA CCCTGACG TTAC CGTCAGGG TTCTTAAATTTGGTC TERM 4072 3776639 - 3776603 - R 70 -8.1 -3.62775 | gap 1, opp_overlap 3776606, overlap 3776604 3776629 ATCACTTTTTAATAA CCTGCGGATGACTGCT GTTAAA AGCA-TCACCCGCAGT GAAAATGGCCGCCTT TERM 4073 3776638 - 3776604 - R 81 -11.6 -2.77344 | gap 1, opp_overlap 3776606, overlap 3776603 3776629 TCACTTTTTAATAAC CTGCGGATGACTGCT GTTAAA AGCA-TCACCCGCAG TGAAAATGGCCGCCT uhpC 3777996 - 3776665 - | regulatory protein UhpC TERM 4074 3776868 - 3776848 - G 71 -6.7 -4.21351 | opp_overlap 3776851 AAATAGCCCAACAAA GCCGGTTGC AGC GCCAGCGGC ATCCTTATGAGAGCA YP_3370 3779620 - 3778091 - | sensory histidine kinase UhpB TERM 4075 3779204 - 3779189 - G 70 -8.2 -3.69338 | opp_overlap 3779193, overlap 3779180 3779192 AACCAACCCTAATAA GAGCGC CATT GCGCCC TGCCCACTGGCTATC uhpA2 3780390 - 3779617 - | two-component system response regulator TERM 4076 3780316 - 3780288 - GR 74 -4.6 -4.81551 | gap 1, overlap 3780289 3780290 GAGGCACATCAAAAA TTGGGCCAGACTT GGGT AAGCCTGGCC-AG TTACGGCTAAATTGC TERM 4077 3780315 - 3780290 - GR 71 -9.7 -2.68202 | overlap 3780289 3780288 GGCACATCAAAAATT GGGCCAGACTT GGGT AAGCCTGGCCA GTTACGGCTAAATTG YP_3372 3782014 - 3780323 - | phosphoethanolamine transferase TERM 4078 3782435 - 3782410 - g 91 -10.3 -4.46656 | overlap 3782411 3782412 GGCAGAAGAGTAAAA TGCCCGCGCCA GAGA TGGCGCGGGTC GAGCTCCCAAGGAAG TERM 4079 3782434 - 3782411 - g 83 -13.8 -3.27271 | overlap 3782410 3782412 GCAGAAGAGTAAAAT GCCCGCGCCA GAGA TGGCGCGGGT CGAGCTCCCAAGGAA TERM 4080 3782433 - 3782412 - g 95 -17.3 -2.5564 | overlap 3782411 3782410 CAGAAGAGTAAAATG CCCGCGCCA GAGA TGGCGCGGG TCGAGCTCCCAAGGA TERM 4081 3782516 - 3782527 + G 81 -5.8 -5.00616 | overlap 3782512 GTCGCGAGCACGTTG CCAG CAGC CTGG TTTTTTGCAGGCAAA YP_3373 3782304 - 3782549 + | hypothetical protein pldB3 3784006 - 3782543 - | hypothetical protein TERM 4082 3783796 - 3783813 + g 70 -2.1 -5.00895 | gap 1, overlap 3783796 3783797 TAATTCGGACTTCAT C-GAAAAT ATT ATTTTCAG TTTTTATGTAATCCG TERM 4083 3783925 - 3783945 + g 73 -9.1 -3.72324 | opp_overlap 3783924 GTGTATCGTAGATAC GTATTGCCA GTA TGGTAATAC TTATTACTACCAATA YP_3375 3784218 - 3784418 + | hypothetical protein TERM 4084 3784462 - 3784425 - T 82 -4.9 -5.41143 | gap 1, overlap 3784429 3784430 CATGCTTGAAAAAAA TAAATCGGGCCGCTGATA CCC CATCAACCGCCCG-TTAA CATTTGTTCCCTTAC TERM 4085 3784459 - 3784429 - T 100 -8.2 -5.20328 | overlap 3784425 3784430 CTTGAAAAAAATAAA TCGGGCCGCTGATA CCC CATCAACCGCCCGT TAACATTTGTTCCCT TERM 4086 3784458 - 3784430 - T 90 -11.7 -3.7057 | overlap 3784429 3784425 TTGAAAAAAATAAAT CGGGCCGCTGATA CCC CATCAACCGCCCG TTAACATTTGTTCCC dnaC_26 3786581 - 3785799 - | transposase/IS protein TERM 4087 3786497 - 3786511 + g 77 -11.4 -3.3506 | overlap 3786510 CTGCCTGTTGTGACA GCGCAG GCG CTGCGC TTATAAGGCTTTCCA YP_3378 3787600 - 3786578 - | transposase for insertion sequence IS100 TERM 4088 3787622 - 3787604 - R 100 -13.2 -4.01078 | AAAAGTGACCATAAA CTCTCCTG AAT CAGGAGAG CAGATTACCCCCTGG hutH 3789786 - 3788254 - | histidine ammonia-lyase hutU 3791489 - 3789783 - | urocanate hydratase TERM 4089 3790786 - 3790769 - G 71 -6.9 -4.20769 | opp_overlap 3790769 3790767 ACAGTGCAATAGAAA CCGCGAC ACCT GTAGCGG TATATTTCTCGATGC cysM2 3792138 - 3793145 + | pyridoxal-phosphate dependent protein TERM 4090 3793676 - 3793659 - g 71 -7.1 -4.20696 | opp_overlap 3793661 GCATTAACGTTAAAA CACTAAT GAAA ATTAGTG TTAAACCTCATGGGG apt2 3793142 - 3793708 + | adenine phosphoribosyltransferase TERM 4091 3794706 - 3794689 - gf 73 -2.7 -4.99043 | overlap 3794692 TCGGCATAAACAAAA TTATTGG GAAC CCAAAAA CAAAAGGGGCATAAC rhaT14 3793791 - 3794720 + | hypothetical protein TERM 4092 3795223 - 3795233 + GF 91 -6.8 -5.17054 | opp_overlap 3795213 CAAGATAAGCAGAGT GCGT ATC ACGC TTTTTTGGCTATTCT TERM 4093 3795518 - 3795507 - gf 76 -5.8 -4.72272 | opp_overlap 3795511, overlap 3795508 TCTGGGGATCAAAAA TGGC CCTA GCCA TGCGGAGGTGATGAT accC1 3794692 - 3795966 + | hypothetical protein fecB3 3796453 - 3797442 + | putative solute-binding iron ABC transport protein btuC3 3797452 - 3798411 + | putative iron transport permease TERM 4094 3798495 - 3798515 + GF 93 -9.7 -4.25256 | overlap 3798492 TATTGCTACTGAGCA TCATCGCTC TCG GTGCGATGA TTATTTTCATGACAA btuC4 3798383 - 3799408 + | putative iron transport permease fecE 3799405 - 3800163 + | putative iron ABC transporter, ATP-binding protein YP_3390 3801081 - 3800896 - | hypothetical protein hipB3 3802037 - 3802399 + | putative regulator TERM 4095 3802851 - 3802838 - f 75 -5.2 -4.76041 | overlap 3802840 CATAGTCAGGAAAAA CGCC GCGTCT GGCG AAAACGGCACCTTGC YP_3393 3803544 - 3803789 + | putative regulatory protein TERM 4096 3803850 - 3803868 + T 76 -6.7 -4.55287 | overlap 3803849 GGCTCTCACCACTTC GCCCTTG CCGTT TAAGGGC TTTTCTCTGGCTAGC YP_3394 3805529 - 3804057 - | hypothetical protein xerC4 3806616 - 3805423 - | putative phage integrase purR11 3808195 - 3807002 - | AraC family transcriptional regulator TERM 4097 3808266 - 3808247 - R 82 -5.7 -4.91459 | opp_overlap 3808247 GAACAGGCAGAAAAA TCAGCGC GGTATG GCACTGA TTTTCCTATGGGATA araH12 3809469 - 3808285 - | sugar transport system permease protein TERM 4098 3809182 - 3809169 - G 72 -3.8 -4.84527 | overlap 3809170 GCCAGACATCAAAAA TGGC CGCTAT GCCA CCCAATAACCCCATC mglA7 3810988 - 3809456 - | xylose transporter ATP-binding subunit TERM 4099 3810677 - 3810660 - G 80 -10.5 -3.727 | overlap 3810649 3810654 TCCATGATACCGAAA CGGCCCC ATTC GGAGCCG AGGAACATGTTCTCC xylF 3812191 - 3811196 - | D-xylose transporter subunit XylF TERM 4100 3812333 - 3812348 + H 70 -2.6 -4.95484 | overlap 3812335 GTTTAATGTTAATTT TATGAT AACG ATCATG TTTTCTTTCCTCATA TERM 4101 3812637 - 3812627 - H 74 -6.8 -4.2717 | opp_overlap 3812615 ACCAGCCCAGCAAAA GCAG GGC CTGC TTCCAAGGAGTATTG xylA 3812654 - 3813973 + | xylose isomerase TERM 4102 3814364 - 3814398 + G 76 -5.7 -4.59773 | gap 1, opp_overlap 3814352 3814360 AAACAACATCAGGTG CTGCGCCCCGCCATTT TATG GAATGACGGC-CGCAG TTTTTCCCAGTGCCA TERM 4103 3815080 - 3815055 - g 84 -4.6 -5.28176 | opp_overlap 3815055 CTGAGGTAGAAAAAA CCCCAATGGC TGCAAC GCCAGTGTGG TTCCTACCCTATCTT xylB2 3814097 - 3815551 + | xylulose kinase TERM 4104 3815613 - 3815643 + T 100 -9.1 -4.82901 | opp_overlap 3815613 3815612 3815610, overlap 3815614 AGTGCGAATAAACAC CGTGCTGGGTAAT TCATT ATTACTCAGCACA TTTTTATAGGGCCAC TERM 4105 3815614 - 3815642 + T 100 -12.6 -3.49419 | opp_overlap 3815613 3815612 3815610, overlap 3815613 GTGCGAATAAACACC GTGCTGGGTAAT TCATT ATTACTCAGCAC ATTTTTATAGGGCCA YP_3402 3816655 - 3815669 - | hypothetical protein fimC10 3817521 - 3816694 - | putative fimbrial chaperone TERM 4106 3816812 - 3816790 - G 70 -11.4 -2.69717 | overlap 3816789 3816785 ATCCATATAACCAAC GTTATAACGG CTA CCGCTATAAC CCGGCGTTTTAACAA fimD6 3818189 - 3817554 - | putative outer membrane usher protein TERM 4107 3818106 - 3818118 + g 73 -6.3 -4.5448 | CCAGTTGGTATTGAT TGAGT TGT ACTCA TTATTTTTATGGCTA fimD7 3820044 - 3818215 - | hypothetical protein TERM 4108 3820002 - 3820016 + g 100 -2.1 -6.34616 | TTGTTAATACTTTCA CCATT AGGAA GATGG TTTTTTTTCTTTTAG TERM 4109 3820074 - 3820107 + r 93 -11.9 -3.66497 | opp_overlap 3820075 3820078, overlap 3820066 3820075 3820078 3820083 CTTATGGCGATAATA TTAATTAGAGGGGAG TTAC CTCCCCTTTAATTAC TTTAAACATTTGTTA TERM 4110 3820106 - 3820075 - R 90 -13.2 -2.53271 | opp_overlap 3820074 3820066 3820075 3820078 3820083, overlap 3820078 TTATGGCGATAATAT TAATTAGAGGGGAG TTAC CTCCCCTTTAATTA CTTTAAACATTTGTT TERM 4111 3820075 - 3820106 + r 100 -15.4 -2.79175 | opp_overlap 3820075 3820078, overlap 3820074 3820066 3820078 3820083 TTATGGCGATAATAT TAATTAGAGGGGAG TTAC CTCCCCTTTAATTA CTTTAAACATTTGTT TERM 4112 3820103 - 3820078 - R 80 -10.5 -3.41745 | opp_overlap 3820075 3820074 3820066 3820078 3820083, overlap 3820075 TGGCGATAATATTAA TTAGAGGGGAG TTAC CTCCCCTTTAA TTACTTTAAACATTT TERM 4113 3820078 - 3820103 + r 100 -12.7 -3.5332 | opp_overlap 3820078 3820075, overlap 3820075 3820074 3820066 3820083 TGGCGATAATATTAA TTAGAGGGGAG TTAC CTCCCCTTTAA TTACTTTAAACATTT TERM 4114 3820083 - 3820098 + r 89 -10.4 -4.04394 | opp_overlap 3820078 3820075, overlap 3820078 3820075 3820074 3820066 ATAATATTAATTAGA GGGGAG TTAC CTCCCC TTTAATTACTTTAAA fimA7 3820764 - 3820120 - | fimbrial protein TERM 4115 3821358 - 3821385 + r 75 -3.4 -5.24129 | opp_overlap 3821358 TTTAACACAATCCAA GCCACTGAGA ATAAACCC TCTCGGTAGC TTTTTTATAAACCAA TERM 4116 3821429 - 3821410 - R 85 -4.4 -5.50925 | opp_overlap 3821426 AACCAAGATAAAAAA TAACTTTA GCAT TAAAGTCA GTGTCGTATATTGGC YP_3407 3822551 - 3821559 - | hypothetical protein TERM 4117 3822130 - 3822140 + g 70 -8.2 -3.67976 | ATTGCCAGATAGCGG CCCG AAA CGGG TTTAACCTTAATAAG TERM 4118 3822914 - 3822858 - g 73 -10.3 -3.30159 | gap 1, opp_overlap 3822863 3822868 3822873, overlap 3822859 3822868 CCAATGGGGCCATAA GTGCACTGAACC-CCAGATCTTGGAT CTTTTT ATCCATGATCTGGAGGTTCGGTTCAA TGAAACACCCTTTTT TERM 4119 3822913 - 3822859 - g 78 -13.8 -2.57881 | gap 1, opp_overlap 3822863 3822868 3822873, overlap 3822858 3822868 CAATGGGGCCATAAG TGCACTGAACC-CCAGATCTTGGAT CTTTTT ATCCATGATCTGGAGGTTCGGTTCA ATGAAACACCCTTTT TERM 4120 3822863 - 3822909 + G 89 -15.4 -3.05384 | gap 1, opp_overlap 3822859 3822858 3822868, overlap 3822868 3822873 GGGGCCATAAGTGCA CTGAACC-CCAGATCTTGGAT CTTTTT ATCCATGATCTGGAGGTTCGG TTCAATGAAACACCC TERM 4121 3822903 - 3822868 - g 79 -12.7 -3.08471 | opp_overlap 3822863 3822868 3822873, overlap 3822859 3822858 CATAAGTGCACTGAA CCCCAGATCTTGGAT CTTTTT ATCCATGATCTGGAG GTTCGGTTCAATGAA TERM 4122 3822868 - 3822904 + G 73 -10.3 -3.19192 | gap 1, opp_overlap 3822868 3822859 3822858, overlap 3822863 3822873 CATAAGTGCACTGAA CC-CCAGATCTTGGAT CTTTTT ATCCATGATCTGGAGG TTCGGTTCAATGAAA TERM 4123 3822873 - 3822883 + G 76 -5.4 -4.88736 | opp_overlap 3822868 3822859 3822858, overlap 3822868 3822863 GTGCACTGAACCCCA GATC TTG GATC TTTTTATCCATGATC YP_3408 3822755 - 3823429 + | putative transposase TERM 4124 3824249 - 3824231 - g 71 -11 -2.73735 | overlap 3824221 3824219 3824242 AAACAGGCGGAATGA GTCCGGCA GAA TACCGGAC TCAGGTAGAAAAGCA tra5G 3823483 - 3824268 + | IS1661 transposase rtn5 3826830 - 3824464 - | hypothetical protein TERM 4125 3826084 - 3826107 + g 73 -8.8 -3.67597 | opp_overlap 3826079 TAACCAATCACTGGC CGATTCTGCC ACAT GGCGGAAACG TTCTTCGCTGGCAGC acrA9 3827470 - 3828747 + | putative drug efflux protein TERM 4126 3830086 - 3830119 + G 70 -8.9 -3.52906 | gap 1, overlap 3830084 AGCCAGATTGCCGGG CCGATCATCGCCACCA CAC TGGTGTTGATGG-CGG TATTTGTGCCAATCG TERM 4127 3830234 - 3830248 + G 70 -9.2 -3.50853 | overlap 3830224 CGTTAACGCTGAGTC CGGCGC TGT GTGCCG TTCTGCTTAAGCGGC acrF 3828760 - 3831879 + | putative integral membrane efflux protein TERM 4128 3831948 - 3831989 + T 86 -11.5 -3.34715 | opp_overlap 3831951 3831952, overlap 3831947 3831949 ATGCTGTTTTGTCAT AAAGCCCATACCCGCCGGT TAAG ACCGGTGGGTATGGGTGAC TCTTTGGGGGCAGTG TERM 4129 3831949 - 3831988 + T 100 -15 -2.60615 | opp_overlap 3831951 3831952, overlap 3831948 3831947 TGCTGTTTTGTCATA AAGCCCATACCCGCCGGT TAAG ACCGGTGGGTATGGGTGA CTCTTTGGGGGCAGT TERM 4130 3831986 - 3831951 - T 100 -17.6 -3.85698 | opp_overlap 3831949 3831948 3831947, overlap 3831952 CTGTTTTGTCATAAA GCCCATACCCGCCGGT TAAG ACCGGTGGGTATGGGT GACTCTTTGGGGGCA TERM 4131 3831985 - 3831952 - T 100 -21.1 -2.91276 | opp_overlap 3831949 3831948 3831947, overlap 3831951 TGTTTTGTCATAAAG CCCATACCCGCCGGT TAAG ACCGGTGGGTATGGG TGACTCTTTGGGGGC senA 3833504 - 3832014 - | enterotoxin-like protein TERM 4132 3833716 - 3833734 + H 100 -12.4 -4.13995 | CAATTCTGCCTTTGA CCTTCCCC CAG GGGGAGGG TTTAGTTTGTAGGCA TERM 4133 3834050 - 3834069 + G 70 -2.2 -5.04733 | gap 1, overlap 3834052 3834055 3834060 GGCAACAGAAATTTG TTTATCCGC TGG GCG-ATAGA TTTTATTTGTCATTC YP_3414 3833782 - 3834369 + | hypothetical protein TERM 4134 3834591 - 3834575 - f 82 -5.9 -5.02645 | AACAAATAAAATAAA CAGTAAC TAC ATTACTG AATCATCTTGTTGTT TERM 4135 3834630 - 3834640 + F 79 -3.2 -5.35224 | ATTTAATAAATTATT GTGG TGT CTAC TTTTCTTTTTATAAG TERM 4136 3834763 - 3834773 + F 82 -3.2 -5.5208 | TTCTTGTATTTTTGT GGGA TTT TTCC TTTTTTATATTATAC TERM 4137 3835467 - 3835489 + G 72 -9.9 -3.34222 | gap 1 ATATTACTGTCAGCA CGCAGGCAGA GCTT TCTGCC-GCG TTATCCAATGGTACT TERM 4138 3839856 - 3839843 - g 71 -6.7 -4.13767 | CGTGCCACCTTAAAA CTGTC GGAT GACAG TGTGACCACCGTCGG TERM 4139 3841677 - 3841664 - g 71 -6.7 -4.13767 | CGTGCCACCTTAAAA CTGTC GGAT GACAG TGTGACCACCGTCGG TERM 4140 3846201 - 3846191 - g 72 -8.2 -3.92542 | GTCACGGTGAAACAA GCCG GGA CGGC GAATATCGCGGAGCT yapH 3835208 - 3846340 + | putative autotransporter protein TERM 4141 3846383 - 3846413 + T 100 -11.3 -5.26316 | opp_overlap 3846383 CGACATGATGATCAA CGGCGCATATT GCAGGACAG AATATGCGCCG TTTTTTATGGGATAA TERM 4142 3846413 - 3846383 - T 86 -11.3 -3.24188 | opp_overlap 3846383 CGACATGATGATCAA CGGCGCATATT GCAGGACAG AATATGCGCCG TTTTTTATGGGATAA YP_3416 3848323 - 3846443 - | leucine-rich repeat-containing protein TERM 4143 3846911 - 3846930 + g 74 -3.6 -5.02231 | overlap 3846899 3846913 GACTTCGATATCATC GACTGAAT TTAC ATTCAGTG TTTTTAGTATTTTTA TERM 4144 3847262 - 3847252 - G 91 -6.8 -5.08088 | AACGGTGAAGAAAAA CGCT AAA AGCG GCTGAGTTAGCTTCT TERM 4145 3848149 - 3848161 + g 80 -10.5 -3.73647 | CTTTCATGCATTCCA CGGCG AAG CGCCG TTGTTCGTCAGTACC TERM 4146 3848478 - 3848508 + r 100 -11.3 -5.26316 | overlap 3848506 AGAATGACCTATCTA CGGCGCATATT GCAGGACAG AATATGCGCCG TTTTTTATGAGATAA TERM 4147 3848640 - 3848668 + r 90 -11 -3.9749 | gap 1 ACCCTTCCTTGGGGG GCGATCCGCACCA TCCC TGGCGCGGA-CGC TTTACTCTTCTGCCT YP_3417 3849761 - 3848886 - | leucine-rich repeat-containing protein TERM 4148 3849911 - 3849941 + r 100 -11.3 -5.26316 | AGAATGACCTATCTG CGGCGCATATT GCAGGACAG AATATGCGCCG TTTTTTATGGGATAC YP_3418 3851787 - 3849970 - | leucine-rich repeat-containing protein YP_3419 3851991 - 3851806 - | hypothetical protein TERM 4149 3852614 - 3852634 + G 75 -8.9 -3.83756 | TTTATTTACGCGCTG GGGGTGTGC TGG GCACTCTCC TTTGGATTATCGTTT TERM 4150 3852709 - 3852730 + G 74 -7.3 -4.17556 | gap 1, opp_overlap 3852699 3852695, overlap 3852709 AGTTACCAATATGTT GG-CACCGGT TGA ACTGGTGACC TTTATTACCACTATG abgT 3852506 - 3854062 + | putative integral membrane efflux protein TERM 4151 3854287 - 3854266 - f 95 -13.1 -3.15544 | overlap 3854251 GCTCATCGGGATTAA TGAGCCTCA TCCG TGAGGCTCA CCCTGCGGGCTAGCA pepD2 3854453 - 3855685 + | peptidase T TERM 4152 3855726 - 3855759 + F 100 -16.1 -3.42861 | overlap 3855722 TGCCTTATCTCCATG TAGGGTACTGGCGTG TTAG CTTGCCAGTACCCTA TTAATGTTGTGACTT TERM 4153 3856238 - 3856221 - g 76 -2.7 -5.2112 | AACAGCAGCAAAAAA CACCCAT AAGT ATAAGTG TATTAACGGGCTTTG TERM 4154 3856337 - 3856347 + G 83 -3.2 -5.44119 | AAAGCGGGCAATCCA TCTG ACG CAGG TTTTTTTACCATGCG cirA4 3856073 - 3858145 + | putative TonB-dependent outer membrane receptor TERM 4155 3858502 - 3858515 + G 70 -2.3 -4.91511 | overlap 3858496 TGCTATTCTGCTCAT GCCAG GAGG CTCGC TTTTTGTCATAAGCT TERM 4156 3859088 - 3859104 + G 74 -7.9 -4.20106 | overlap 3859090 3859098 GATTATCAGGCTAAC TCCGGGG CTG CCCCCGA TTTTGCGTGGGATTT TERM 4157 3861984 - 3861973 - g 71 -7.2 -4.07568 | CTGTCGCTTTGAAAA GGCG CAAT CGCC CAAACAATGGTTGGC TERM 4158 3862750 - 3862764 + G 75 -9.2 -3.90586 | opp_overlap 3862744 3862741 TGCAAAGGAGCGCTA CGCGCT ACG GGCGCG TTTATCCCATCGTAT TERM 4159 3863780 - 3863758 - g 72 -9.8 -3.41051 | opp_overlap 3863758 3863757 GTATGTGGATGACAA GGTGCTGGCG CAT CGCCAACAGC CGTTATCGGGTGTCC TERM 4160 3863832 - 3863820 - g 79 -9.1 -4.13767 | opp_overlap 3863820 3863819 3863802 CTTTTGAGGCCAAAA CCCTG CAT CAGGG CTTTTGGCAGCAAGT TERM 4161 3865943 - 3865964 + G 77 -10.2 -3.53012 | GATGCCCTGCCTGAG GGGATTGC CATGCT GCAATCCC TTTGCCACGGAGGGA entF1 3858296 - 3868231 + | putative siderophore biosysnthesis protein TERM 4162 3868237 - 3868256 + F 81 -10.8 -3.34398 | opp_overlap 3868228 3868235 3868227, overlap 3868235 AACAACTTGAACACG CTGTGCAA CGGC TTGCACAG TATTTACACGAGCAA entF2 3868275 - 3869927 + | putative siderophore biosysnthesis protein TERM 4163 3871202 - 3871188 - g 79 -11.4 -3.61398 | TGGGGGCGGCAACAA GGCGTG GGG CACGCC AGAATGCCCATCGTT TERM 4164 3871511 - 3871535 + G 83 -9.9 -4.21933 | GGAGGAGGTCGGCAC GGGAGAGGCAC TTT GTGACTCGCCC TTGTTTTGGCATTCA TERM 4165 3872408 - 3872424 + G 79 -12.3 -3.19192 | TTATATCTTGCTTTC CGGGGAT TGG ATCCCCG TTAACTTACCTCCAG TERM 4166 3873663 - 3873681 + G 70 -3.2 -4.78107 | opp_overlap 3873663 CTCTTACAGGGCAAA GAAGAT CCCCTCA ATCTTC TTTTTCCTGATGGTC entF3 3869940 - 3875768 + | putative siderophore biosysnthesis protein fabG11 3875747 - 3876835 + | dehydrogenase TERM 4167 3877901 - 3877923 + G 100 -9.8 -4.99035 | TTGTCGAACCGATGA TGGCGTCACC TAA GGTGGCGACA TTTTTATCTCAATGG YP_3427 3876832 - 3877959 + | hypothetical protein TERM 4168 3878382 - 3878367 - gf 71 -4.6 -4.64676 | overlap 3878368 GTATCTTGAACAAAA TCACCC AATT GGGTGG CAGCACATTGGACTA TERM 4169 3878598 - 3878610 + GF 76 -3.3 -5.1244 | TTCGGCTACAGGTGT TCCCC GGT GGGCA TTTTTATCTTAATCA grsT 3877949 - 3878716 + | putative thioesterase TERM 4170 3879010 - 3879026 + GF 73 -2.9 -5.00616 | TGTGCTCTTTGATTG CCATGAC GCT GCTATGG TTTTTTGCGCCAGAG TERM 4171 3879247 - 3879263 + GF 100 -6.5 -5.29445 | GTGTTTGGGGGTGGT CCGTCAC CGT GTGGTGG TTTTTGTTGTTACAG proP29 3878664 - 3880010 + | hypothetical protein TERM 4172 3880431 - 3880480 + GF 83 -2.9 -5.38326 | gap 2, overlap 3880437 TGGCTCACCATTTAC CCG-A-TATGGCGGCGGCAATTG TCACGC CTATTGCTGCCGCCATTTTACTG TTTTTCTTTGATTGG TERM 4173 3880437 - 3880472 + GF 100 -15.5 -4.62102 | overlap 3880431 ACCATTTACCCGATA TGGCGGCGGCAATTG TCACGC CTATTGCTGCCGCCA TTTTACTGTTTTTCT TERM 4174 3880794 - 3880817 + GF 100 -9.6 -5.00616 | ATCTCGGTTTATTGT GCATTATGCC TGTT GGCATCATGC TTTTTTCCCAAGGGG TERM 4175 3881526 - 3881507 - gf 72 -9.2 -3.14132 | overlap 3881511 GTGCTCTTGGATGAA GCAACGGC TTAT GCCGATGC CCGTAACGAGGTCCG mdlB5 3880010 - 3881782 + | ABC-transporter transmembrane protein TERM 4176 3882247 - 3882264 + GT 90 -11.3 -3.60971 | opp_overlap 3882242 TGCTAAAAGATTGGC GCATGGC GTTA GCCATGC TTTCAACGTTACCCT TERM 4177 3882501 - 3882489 - gT 74 -4.7 -4.87786 | overlap 3882478 TTAACGGCAGAAAAA GCCGG TGT CTGGC CGATCTACAGTTTTA TERM 4178 3882578 - 3882590 + GT 73 -9.1 -3.52079 | CTGGGGCTGGGTAGG GGGGA GGA TCCCC TTGTCTGAAGTATTG mdlB6 3881757 - 3883532 + | ATP-binding protein YP_3432 3884730 - 3883855 - | hypothetical protein TERM 4179 3884924 - 3884944 + r 84 -9.9 -3.75933 | overlap 3884899 CTATTTATATTATTT TATGCTTAA TAG TTAAGCATA TTTAATAACATATAT YP_3433 3885564 - 3885166 - | hypothetical protein TERM 4180 3886784 - 3886806 + H 83 -11.4 -2.94912 | opp_overlap 3886788, overlap 3886788 AACATAAATGCGGTT CAAATGGGTT CCA GACCCATTTG TCTCTCGCTTGCCGC TERM 4181 3887421 - 3887448 + G 74 -7 -4.42788 | gap 1 AGCCGCGGTAATTAT CATCGGCCTGATC TTT GGTCTGGC-GATG TTTTATGAGGTTGCC gntP 3887104 - 3888447 + | fructuronate transporter TERM 4182 3888969 - 3888959 - f 75 -3.2 -5.14626 | ATCACGAAAATAAAA CGCT CGA AACG ACGTAGGGTAAGGAA TERM 4183 3891987 - 3891967 - f 76 -11.1 -2.50816 | opp_overlap 3891967, overlap 3891966 CGGTTAGTGATCAAC GGCGATGCC ACC GGCACCACC TCGGTTCGGGTGAAC TERM 4184 3893231 - 3893261 + F 83 -9.1 -4.15044 | opp_overlap 3893230 3893231 TTTTTATGCGTAAAG GGTATCAGTATGC AGTGA GGGTACTGATACC TTTATTCAGGGGAGA TERM 4185 3893450 - 3893440 - f 73 -2.6 -5.15969 | opp_overlap 3893440 CGGTAAGTTAAAAAA TAAA TCA TTTA TTTAGTGTCGCCAAC TERM 4186 3893621 - 3893609 - f 70 -2.7 -5.01823 | ACAATAACAAGAAAA TTCCT ACA AAGAA TTAGTCGGGTCTTAT TERM 4187 3896413 - 3896393 - g 70 -11.1 -2.50816 | opp_overlap 3896393, overlap 3896392 CGGTTAGTGATCAAC GGCGATGCC ACC GGCACCACC TCGGTTCGGGTGAAC YP_3436 3893867 - 3897637 + | putative virG protein TERM 4188 3897688 - 3897656 - f 76 -9.2 -3.57144 | GTTTTTATGCGTAAA GGGTATCAGTATGC AGTGA GGGTACTGATACCC TAATAAATAACCTAA TERM 4189 3900170 - 3900157 - g 84 -2.3 -5.58454 | CGGATATCAAAAAAA TACCC TCGA GGGTT ATAAAAAATCCAAGA TERM 4190 3900261 - 3900231 - g 70 -9 -3.63228 | GGCACGATAAATTAA CCGTCGGTGACA CAATCAC TATCACCGCCGG CACCAGTATTACGCT vgrG3 3898223 - 3900448 + | hypothetical protein YP_3438 3900453 - 3901793 + | hypothetical protein TERM 4191 3903930 - 3903948 + G 73 -5.2 -4.60889 | overlap 3903932 GCAGCGCACGGAACT GGCCTATG ATG CATGGGGC TTTTTGCGGGTCATT rhsA2 3901807 - 3906123 + | Rhs family protein YP_3440 3906406 - 3906648 + | hypothetical protein TERM 4192 3907255 - 3907242 - g 79 -6.7 -4.59773 | TCTTACTTTGAAAAA TCTGG ATAG CCAGA AAGTTGTCTCCGGCA cysK3 3907192 - 3907605 + | hypothetical protein TERM 4193 3907727 - 3907748 + T 76 -10.2 -3.05596 | opp_overlap 3907727 TCATTGCCCCATAAA TTAGGCCC ATGCAG GGGCCTAA TTCCCTGACGGCGTA TERM 4194 3907748 - 3907727 - T 86 -10.2 -3.86346 | opp_overlap 3907727 TCATTGCCCCATAAA TTAGGCCC ATGCAG GGGCCTAA TTCCCTGACGGCGTA citT3 3909164 - 3907785 - | di- and tricarboxylate transporters TERM 4195 3909027 - 3909015 - G 79 -9.1 -4.18934 | opp_overlap 3909025, overlap 3909023 GAGGATGCCAATAAA GGCCA AGA TGGCC AGGCCGCGATTGGCG cytR2 3910465 - 3909446 - | putative transcription repressor TERM 4196 3910288 - 3910300 + g 75 -9.1 -3.87815 | TATCTCTGGCAATGG GCCGT TCC ACGGC TTTATGGACATAGCC TERM 4197 3910427 - 3910452 + g 100 -3.3 -5.85737 | gap 1, overlap 3910420 3910433 TACTCCCGCTTTGGC CGCAATGTGGCT CAT AGTCACTTT-CG TTTTTTTATTCATAT TERM 4198 3910433 - 3910447 + g 73 -6.4 -4.57518 | overlap 3910420 3910427 CGCTTTGGCCGCAAT GTGGCT CAT AGTCAC TTTCGTTTTTTTATT YP_3444 3910747 - 3911832 + | hypothetical protein TERM 4199 3912705 - 3912684 - g 71 -5.1 -4.44211 | gap 1, overlap 3912685 3912686 TTTAATACAAAAGAA CGCGTCAACG TCA CGGTGACG-G AAAAGGTCACGCTAA melB2 3911985 - 3913418 + | Sodium:galactoside symporter family protein TERM 4200 3913609 - 3913564 - T 82 -7.9 -4.55697 | opp_overlap 3913564 3913569, overlap 3913569 ATTGCCATAAACAAA TTATAGGGGC-TTGCGCAA TGTCTTAATT TTGCGCAAAGCCCCT-TAA TTATTGATGGGTGAT TERM 4201 3913564 - 3913609 + T 80 -10 -3.73914 | opp_overlap 3913564 3913569, overlap 3913569 ATTGCCATAAACAAA TTATAGGGGC-TTGCGCAATGT CTTA ATTTTGCGCAAAGCCCCT-TAA TTATTGATGGGTGAT TERM 4202 3913569 - 3913605 + T 100 -12.4 -3.56142 | gap 1, opp_overlap 3913569 3913564, overlap 3913564 CATAAACAAATTATA GGGGC-TTGCGCAATGT CTTA ATTTTGCGCAAAGCCCC TTAATTATTGATGGG TERM 4203 3913605 - 3913569 - T 77 -10.3 -3.16414 | gap 1, opp_overlap 3913564 3913569, overlap 3913564 CATAAACAAATTATA GGGGC-TTGCGCAA TGTCTTAATT TTGCGCAAAGCCCC TTAATTATTGATGGG iutA 3915857 - 3913677 - | putative ferric siderophore receptor iucD 3917257 - 3915929 - | putative siderophore biosynthesis protein IucD TERM 4204 3916380 - 3916402 + g 70 -3.3 -4.8048 | gap 1, overlap 3916372 TTGGTCAGTGAGCGG CTG-GGGAGC AGGC GCGCCCACGG TTTTTCATGTAACAC iucC 3919002 - 3917254 - | putative siderophore biosynthesis protein IucC iucB 3919949 - 3918999 - | putative siderophore biosynthesis protein IucB TERM 4205 3920767 - 3920791 + H 70 -7.8 -3.63744 | opp_overlap 3920766 3920765, overlap 3920766 3920768 CGTTTGAGCCAAACG TGCCAAGCGC ATACC GCGTTTGGCC TCTTTTACCGACAGG TERM 4206 3920768 - 3920790 + H 81 -11.3 -2.78032 | opp_overlap 3920766 3920765, overlap 3920767 3920766 GTTTGAGCCAAACGT GCCAAGCGC ATACC GCGTTTGGC CTCTTTTACCGACAG TERM 4207 3922616 - 3922633 + G 71 -6.3 -4.42238 | gap 1, overlap 3922605 3922619 ATTCGGCCACCACGG TGAGCCAC CAC GTGGC-CA TTTTGCTTAGCATAG proP30 3921844 - 3923067 + | hypothetical protein YP_3452 3924190 - 3923357 - | hypothetical protein TERM 4208 3924393 - 3924354 - R 100 -15.4 -5.93809 | opp_overlap 3924328 3924361 TTTTTATAAAAAAAA TGATAAATTTCATGCTTA ATTA TTAGCATGAAATTTATCA TAGGGAAGGGACAAT TERM 4209 3924361 - 3924386 + r 74 -7.7 -3.96148 | opp_overlap 3924354 AAAAAAAATGATAAA TTTCATGCTTA ATTA TTAGCATGAAA TTTATCATAGGGAAG dAP2 3925943 - 3924567 - | hypothetical protein TERM 4210 3925660 - 3925678 + g 73 -11 -2.88579 | opp_overlap 3925660 3925658 3925655 3925662, overlap 3925662 AGCGCTATAATCATA TAGCGTCC TGA GGGCGCTA TATCTGCCGGATTAG TERM 4211 3926273 - 3926329 + H 70 -3.9 -4.78157 | gap 1, opp_overlap 3926279, overlap 3926279 GGAGCTAGACATTAT ATTAAATGCTACAGAAGTTCTACTTG CAGAAA CAGGT-GCACTTCTGTAGCATTTTCC TTTATTATTTTTGGT TERM 4212 3926323 - 3926279 - H 86 -10.2 -3.88062 | gap 1, opp_overlap 3926273 3926279 AGACATTATATTAAA TGCTACAGAAGTTCTACTTGC AGAA ACAGGT-GCACTTCTGTAGCA TTTTCCTTTATTATT TERM 4213 3926279 - 3926323 + H 100 -11.7 -4.71708 | gap 1, opp_overlap 3926279, overlap 3926273 AGACATTATATTAAA TGCTACAGAAGTTCTACTTG CAGAAA CAGGT-GCACTTCTGTAGCA TTTTCCTTTATTATT TERM 4214 3926465 - 3926485 + H 74 -9.8 -3.16881 | opp_overlap 3926465, overlap 3926456 3926451 CGGTAGTTGTACTAA GGTGCAAT TTCCT ATTGCACC TTAGTACAGTAAATG TERM 4215 3926485 - 3926465 - H 74 -9.8 -3.15544 | opp_overlap 3926456 3926451 3926465 CGGTAGTTGTACTAA GGTGCAAT TTCCT ATTGCACC TTAGTACAGTAAATG yspR 3926511 - 3927254 + | quorum-sensing transcriptional regulator yspI 3927885 - 3927235 - | N-acylhomoserine lactone synthase YspI TERM 4216 3927792 - 3927808 + g 70 -2.2 -4.95957 | opp_overlap 3927792 TCACCTCCCAGTTAA GACGAT CCTTA AACGTC TTTTTCCTTAATTTA YP_3456 3929055 - 3929705 + | hypothetical protein YP_3457 3930156 - 3930551 + | putative lipoprotein insA1 3930613 - 3930882 + | insertion element protein TERM 4217 3931090 - 3931080 - g 70 -2.6 -4.96773 | GGAATCAAAAATAAA TTTA TGT TAAA ACTAATTATTTTTAT TERM 4218 3931199 - 3931210 + G 91 -3 -5.84011 | CAGAAGCGTTGGGAT GATA TTTA TATC TTTTTATTTTTTATT YP_3460 3931056 - 3931427 + | hypothetical protein YP_3461 3932824 - 3933327 + | hypothetical protein TERM 4219 3933415 - 3933393 - g 71 -6.3 -4.34402 | gap 1, overlap 3933394 GTCTGTACAGGAAAA CCGTGCGCAG GGTA CTGCG-ACGA CCGTATTAAAGAATA YP_3462 3933370 - 3934920 + | hypothetical protein TERM 4220 3934948 - 3934965 + G 71 -5.5 -4.54727 | TGAAGATTGAACGTC CTCTGTG GACT CGCGGAG TTTTGATTTCCCCGC TERM 4221 3935014 - 3934995 - g 90 -13.6 -3.68936 | CAGCAATTTCAACAA CAGGCCTC CTGG GAGGCCTG GACCAATGAATGCAT YP_3463 3934932 - 3936284 + | hypothetical protein TERM 4222 3936571 - 3936588 + G 74 -2.6 -5.09225 | overlap 3936573 3936574 CTTCGTGTGGTGCCA TTCGCC CTTACA GGCGCA TTTTTTCAATACCCT YP_3464 3936281 - 3936967 + | hypothetical protein TERM 4223 3938054 - 3938084 + G 77 -10.4 -3.61398 | GGGTGGCCTTTGATA TCCGTCAGTACCAC AGC GTGGCGATGACGGA TTATTCCCCGAAAGC ompA4 3936967 - 3938703 + | OmpA family membrane protein hcp8 3938707 - 3939198 + | hemolysin-coregulated protein (uncharacterized) TERM 4224 3939282 - 3939301 + F 100 -11.4 -5.69068 | opp_overlap 3939285 AGGGTAACCCCGCAA GTAGGCGG TTCG CCGCCTGC TTTTTTGTGTTTTTA clpB3 3939616 - 3942264 + | Clp ATPase TERM 4225 3943433 - 3943414 - g 70 -2.8 -4.8143 | gap 1, overlap 3943406 3943415 3943416 TCAACAAGCCAAAAA TGGCCGGCA CCT TGCCCGC-A CGGGTCACCAGCACC vgrG4 3942261 - 3944609 + | hypothetical protein TERM 4226 3944684 - 3944664 - g 95 -15.5 -3.18511 | opp_overlap 3944668 GAGATAGAGATGCAA CCCAGTCAG ATG CTGACTGGG TTGACGCGATGATGC YP_3469 3944624 - 3946846 + | hypothetical protein YP_3470 3946847 - 3947347 + | hypothetical protein YP_3471 3947531 - 3947725 + | hypothetical protein YP_3472 3947751 - 3948029 + | insertion sequence protein TERM 4227 3948595 - 3948569 - f 71 -3.2 -5.01042 | opp_overlap 3948585 AATTTAAAGGAAAAA TCATTACACAAA CTA TTTATATAATAA TTTTTTGTATAAGGA TERM 4228 3948585 - 3948595 + F 76 -2.6 -5.36441 | opp_overlap 3948569 CATTACACAAACTAT TTAT ATA ATAA TTTTTTGTATAAGGA mdlB7 3948950 - 3949585 + | ABC-type multidrug/protein/lipid transport system, ATPase component TERM 4229 3950378 - 3950368 - g 74 -6.8 -4.31329 | TGAAAAACTGGAAAA CACC GAT GGTG CAGATTACGAATACA TERM 4230 3951772 - 3951759 - g 72 -3.9 -4.75288 | GTACAGTAAAAGAAA TTGAT AAAG ATCAA GCAGAAAGTGCCGAT YP_3475 3949601 - 3951898 + | putative kinase TERM 4231 3951910 - 3951929 + G 73 -3 -5.00616 | TTAAAAAATTGACAT TGAAATAT TTTT ATATTTTA TTTTTTACACCCCAC TERM 4232 3952027 - 3952016 - g 74 -4.4 -4.84033 | AGACAAAAATGAAAA TGCA ATTT TGCA TGTAAAAAAAAACCA YP_3476 3951885 - 3952652 + | hypothetical protein insA2 3952745 - 3953023 + | insertion sequence protein insB 3953077 - 3953445 + | insertion sequence protein TERM 4233 3953698 - 3953672 - f 71 -3.2 -5.01042 | opp_overlap 3953688 AATTTAAAGGAAAAA TCATTACACAAA CTA TTTATATAATAA TTTTTTGTATAAGGA TERM 4234 3953688 - 3953698 + F 76 -2.6 -5.36441 | opp_overlap 3953672 CATTACACAAACTAT TTAT ATA ATAA TTTTTTGTATAAGGA TERM 4235 3955144 - 3955118 - f 81 -7.2 -4.71776 | opp_overlap 3955118 TAAGACGCAAGAAAA CCGAAGTTTGTC ATC GACATCCTCCGG TTTCTTCGTCCCGTA TERM 4236 3955299 - 3955315 + F 76 -10.9 -2.62616 | opp_overlap 3955298 3955296 3955293 TCGAACCAAGGACAC GGGGATT TTC AATCCCC TGCTCTACCGACTGA TERM 4237 3956385 - 3956414 + G 76 -4.3 -5.00884 | gap 1 ATGAATAACTCGACC TTTGCTTGCCCTGG CCA TCAGGG-GGGCGAA TTTTTTCGCAAGCAT TERM 4238 3956434 - 3956444 + G 74 -2.4 -5.1925 | TTCGCAAGCATCCTG CAGG ACG CCAG TTTTTTGAATTCTAC speC 3956010 - 3958172 + | ornithine decarboxylase TERM 4239 3958197 - 3958226 + F 83 -11.5 -3.05521 | TCTCCGCTCCATCAG CCGAGGCCATT TTTTAATT GATGGCCTCGG TATTAAACATCTCAT rbsB10 3958728 - 3959687 + | putative sugar ABC transporter periplasmicbinding protein mglA8 3959733 - 3961232 + | galactoside transport ATP-binding protein TERM 4240 3961347 - 3961358 + G 84 -4.4 -5.35721 | TCCTGCTAGACAACT CAAC GACC GTTG TTTTTATTGTTATGT araH13 3961229 - 3962248 + | putative sugar transport system permeaseprotein cirA5 3964475 - 3962331 - | putative hydroxamate-type ferrisiderophore receptor TERM 4241 3963621 - 3963656 + g 79 -11.1 -3.57792 | opp_overlap 3963631 GGTGGCGTTATAGCT CTCGTCGAAACGGCG ATCACG CGGCGTGTCGACGGG TTTGCCAGTGCGTGG fecB4 3965439 - 3964468 - | hypothetical protein mltC 3966944 - 3965868 - | murein transglycosylase C TERM 4242 3966436 - 3966460 + g 100 -9.4 -5.18371 | gap 1, opp_overlap 3966436 ACGAACGAGATCACA TGCAAAC-CGG AAGT CCGTGTTTGCA TTTTGTTTTGTAGCA TERM 4243 3967123 - 3967099 - R 83 -9.3 -4.015 | gap 1, opp_overlap 3967096 3967092 3967102, overlap 3967102 CTATTTAGGAAATAA CAGCGGGGCC TTAATT GGCCCCG-TG TGGTTACTTACTCGG TERM 4244 3967102 - 3967121 + r 86 -12.1 -2.97613 | opp_overlap 3967099 3967102, overlap 3967096 3967092 TTTAGGAAATAACAG CGGGGCC TTAATT GGCCCCG TGTGGTTACTTACTC TERM 4245 3967121 - 3967102 - R 83 -12.1 -2.75069 | opp_overlap 3967102 3967096 3967092, overlap 3967099 TTTAGGAAATAACAG CGGGGCC TTAATT GGCCCCG TGTGGTTACTTACTC YP_3488 3967399 - 3967127 - | hypothetical protein mutY 3968824 - 3967577 - | adenine DNA glycosylase trmB 3969030 - 3969749 + | tRNA (guanine-N(7))-methyltransferase YP_3491 3969749 - 3970075 + | hypothetical protein TERM 4246 3970107 - 3970124 + F 100 -9.8 -4.91852 | opp_overlap 3970106 3970104 3970107 CTGATCATTAAACAG GGCGCC CTAACC GGCGCC TTTGTTTTTACTGGC TERM 4247 3970124 - 3970107 - f 71 -9.8 -2.68493 | opp_overlap 3970107, overlap 3970106 3970104 CTGATCATTAAACAG GGCGCC CTAACC GGCGCC TTTGTTTTTACTGGC glsA2 3970186 - 3971112 + | glutaminase TERM 4248 3971985 - 3971963 - f 100 -9 -4.75472 | opp_overlap 3971962 3971961, overlap 3971964 CTTAGAGTAATAAAA GGGGGGGGGA TAT TCCCCCTCCA AATTTAGAATCGCCA TERM 4249 3971984 - 3971964 - f 100 -12.5 -3.4456 | opp_overlap 3971962 3971961, overlap 3971963 TTAGAGTAATAAAAG GGGGGGGGA TAT TCCCCCTCC AAATTTAGAATCGCC TERM 4250 3974770 - 3974759 - g 70 -3 -4.86731 | TTCCTTTAAACAAAA TGAT AAAA ATCA CCACCCACAATTTAT TERM 4251 3974822 - 3974802 - g 76 -12.7 -2.57243 | overlap 3974801 3974799 3974804 GTATTATTACAAGAT GACTCTCTT TCT AAGAGAGTC GGAGAGATTATTGCT TERM 4252 3975872 - 3975853 - g 70 -10 -3.28447 | opp_overlap 3975852 3975853, overlap 3975851 3975854 TCATTGACGATAATA CTCACGCC GAGT GGCGTGAA ATTAGTCATAATGAA TERM 4253 3975871 - 3975854 - g 70 -11.3 -2.56747 | opp_overlap 3975853 3975852, overlap 3975853 3975851 CATTGACGATAATAC TCACGCC GAGT GGCGTGA AATTAGTCATAATGA YP_3494 3972453 - 3981785 + | putative virulence determinant TERM 4254 3983082 - 3983103 + G 77 -10.1 -3.74693 | TTTATTATCGAGTTC GGTGACCGC CTGA GCGATCACC TTTAATACGGTGGCA YP_3495 3981900 - 3983108 + | transposase for the IS285 insertion element hemN2 3984440 - 3983298 - | coproporphyrinogen III oxidase TERM 4255 3984119 - 3984102 - G 70 -9.1 -3.56643 | opp_overlap 3984116, overlap 3984079 CTGATAGCCGCTAAA GCGATCG GCTT CGACCGC TCCGGGGTTGGCTTC YP_3497 3985014 - 3984421 - | putative deoxyribonucleotide triphosphate pyrophosphatase YP_3498 3985404 - 3985114 - | hypothetical protein YP_3499 3985955 - 3985401 - | hypothetical protein TERM 4256 3985759 - 3985749 - G 70 -3.2 -4.77036 | GGTCATCAGTAAAAA TGCC AAC AGCA ATGATGCGCTATCGA proC 3987064 - 3986243 - | pyrroline-5-carboxylate reductase YP_3501 3987925 - 3987197 - | hypothetical protein TERM 4257 3987458 - 3987494 + gH 91 -13.1 -2.87527 | opp_overlap 3987461, overlap 3987462 ACTAATGCTGTCAGC CAAGGCGGGGAGTTC ACTCAAG GAAATCCCCGCTTTG CTTTGCTCATCACTG TERM 4258 3987462 - 3987490 + gH 91 -10.3 -4.11623 | opp_overlap 3987461, overlap 3987458 ATGCTGTCAGCCAAG GCGGGGAGTTC ACTCAAG GAAATCCCCGC TTTGCTTTGCTCATC YP_3502 3987909 - 3989039 + | pili biogenesis protein PilT-like ATPase TERM 4259 3989123 - 3989096 - TR 100 -15 -4.20783 | AGGTGATGCAATAAA TTAACCCGGATC GGAT GATCCGGGTCAA GCAGGCGGCTTATTT YP_3503 3990263 - 3989148 - | agmatine deiminase YP_3504 3991151 - 3990267 - | putative carbon-nitrogen hydrolase TERM 4260 3991193 - 3991179 - R 95 -5.7 -5.59564 | ATAAATGTAAAAAAA CACCT GCAAG AGGTG TGCAATATTTTAAAC YP_3505 3991753 - 3991331 - | Holliday junction resolvase-like protein YP_3506 3992316 - 3991753 - | hypothetical protein gshB 3993391 - 3992432 - | glutathione synthetase YP_3508 3994148 - 3993417 - | hypothetical protein TERM 4261 3993951 - 3993969 + g 74 -3.8 -4.9725 | opp_overlap 3993963 CCATTGCCCTTCAGC GAGTCGGA CAA TCAGATTC TTTTTATCTGCCCGT YP_3509 3994421 - 3994257 - | hypothetical protein endA 3995107 - 3994400 - | endonuclease I TERM 4262 3994870 - 3994889 + g 84 -4.2 -5.31456 | gap 1, opp_overlap 3994870, overlap 3994873 3994875 CATGTTCCCATTCAA T-CCGCGCG GCT CGCGCTGCA TTTTTTCTGGGTTGA TERM 4263 3994873 - 3994885 + g 70 -10.5 -2.96157 | opp_overlap 3994870, overlap 3994870 3994875 GTTCCCATTCAATCC GCGCG GCT CGCGC TGCATTTTTTCTGGG sprT 3995768 - 3995205 - | hypothetical protein TERM 4264 3995834 - 3995864 + r 100 -11.8 -3.81516 | opp_overlap 3995834 GTGCATACAAATAAA CCACCCTGCCAGCG TGT TGCTTACAGGGTGG TTCTTCATCGTTTTA TERM 4265 3995864 - 3995834 - R 100 -13.3 -4.62441 | opp_overlap 3995834 GTGCATACAAATAAA CCACCCTGCCAGC GTGTT GCTTACAGGGTGG TTCTTCATCGTTTTA metK 3997064 - 3995910 - | S-adenosylmethionine synthetase speA 3998272 - 4000251 + | arginine decarboxylase TERM 4266 4000282 - 4000301 + F 100 -8.6 -5.40072 | opp_overlap 4000282 TCAGTATCGATTAAA GGGCAAAC TCAG GTTTGTCC TTTTTTTCGGCGCGA hcaA12 4000411 - 4000731 + | putative Rieske protein TERM 4267 4000783 - 4000810 + T 80 -9.8 -3.62046 | opp_overlap 4000770 4000784, overlap 4000784 AACGTCAGCTACAGA ACTCACGCCCCA ACAG TGGGGAGTGAGG TTATTGACAAAGTGC TERM 4268 4000809 - 4000784 - T 100 -13.3 -3.52102 | opp_overlap 4000783 4000784, overlap 4000770 ACGTCAGCTACAGAA CTCACGCCCCA ACAG TGGGGAGTGAG GTTATTGACAAAGTG TERM 4269 4000784 - 4000809 + T 93 -13.3 -2.77013 | opp_overlap 4000770 4000784, overlap 4000783 ACGTCAGCTACAGAA CTCACGCCCCA ACAG TGGGGAGTGAG GTTATTGACAAAGTG TERM 4270 4000883 - 4000909 + T 72 -10.1 -2.88849 | gap 1, opp_overlap 4000872, overlap 4000878 4000884 ACATCCATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCTCTGCC TERM 4271 4000884 - 4000910 + T 84 -10.1 -3.82218 | gap 1, opp_overlap 4000872, overlap 4000878 4000883 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCTCTGCCT TERM 4272 4000968 - 4000996 + T 72 -9.6 -3.14564 | gap 1, overlap 4000971 GGGGTTTGTCAGCAG T-CTGACGCCCCA ACAG TGGGGCGTCTGCA TTGATAAGAGACTGG TERM 4273 4000971 - 4000992 + T 100 -15.9 -2.56596 | overlap 4000968 GTTTGTCAGCAGTCT GACGCCCCA ACAG TGGGGCGTC TGCATTGATAAGAGA htpX3 4001800 - 4001021 - | Zn-dependent protease with chaperone function TERM 4274 4001153 - 4001167 + g 86 -7 -5.0133 | GGTTACCAGACCGTT CGGGTC AAT GCCCCG TTTTTTCAGCAAATC TERM 4275 4002090 - 4002100 + H 71 -4.6 -4.63218 | ATGGTTTGTCGTTGT GCGG TGG CTGC TTTTGTTCACCCCAA tktA3 4002264 - 4004258 + | transketolase TERM 4276 4004336 - 4004309 - f 75 -5.6 -4.58663 | ATTAGCCGTTAAAAA GTCATTAACTGT TAAA ACAGGCAACGAC GTTATCAATACTGCA TERM 4277 4004414 - 4004399 - f 91 -10.4 -4.09864 | opp_overlap 4004399 ATGCACCTGTTAAAA GACCGC TTTT GCGGTC TTTTTTTTGTGCCCA TERM 4278 4004399 - 4004414 + F 100 -10.4 -5.93809 | opp_overlap 4004399 ATGCACCTGTTAAAA GACCGC TTTT GCGGTC TTTTTTTTGTGCCCA TERM 4279 4004453 - 4004435 - f 100 -16 -4.36914 | opp_overlap 4004435 TTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC TERM 4280 4004435 - 4004453 + F 100 -16 -3.07307 | opp_overlap 4004435 TTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC tnp_38 4004515 - 4005024 + | transposase for the IS1541 insertion element TERM 4281 4005102 - 4005126 + F 88 -9.9 -4.23045 | opp_overlap 4005105, overlap 4005104 4005105 ATAGGCGCATATGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTGACTAATTC TERM 4282 4005104 - 4005124 + F 100 -12.5 -3.70709 | opp_overlap 4005105, overlap 4005102 4005105 AGGCGCATATGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTGACTAAT TERM 4283 4005105 - 4005123 + F 100 -16 -2.81702 | opp_overlap 4005105, overlap 4005104 4005102 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTGACTAA TERM 4284 4005123 - 4005105 - f 100 -16 -4.8048 | opp_overlap 4005105 4005104 4005102 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTGACTAA TERM 4285 4005167 - 4005177 + F 70 -5.4 -4.49344 | overlap 4005154 4005161 TGTGCCCTTTTTCAG GGAA ATA TTCC TTTTATCATGACTTT TERM 4286 4005282 - 4005261 - f 73 -5.8 -4.42653 | opp_overlap 4005262, overlap 4005262 4005263 ATCCCACCGAGAAAA CCCGGCCA GTATTA TGGCCGAA TTGTGATAATACGAT epd 4005365 - 4006381 + | erythrose 4-phosphate dehydrogenase TERM 4287 4007030 - 4007012 - g 100 -16 -3.56568 | opp_overlap 4007004 4007001 4007029 GAAGCATTGGGTAAA GCGCTGGG TAA CCCAGCGC GTCCAATGGTTGCTA TERM 4288 4007406 - 4007391 - g 76 -7.6 -4.31329 | opp_overlap 4007399 TGAAAAATGCCAAAA CCATTC TGTG GAATGG TCCGGTTGGTGTGTT pgk 4006484 - 4007647 + | phosphoglycerate kinase fbaA 4007767 - 4008846 + | fructose-bisphosphate aldolase TERM 4289 4008867 - 4008894 + F 100 -14.2 -3.62046 | opp_overlap 4008874, overlap 4008874 GTCTGTTCGGACTGA CCTAAAAGGCCC TACG GGGCCTTTGAGG TTATTGACAAAGTGC TERM 4290 4008887 - 4008874 - f 85 -9.5 -4.19817 | opp_overlap 4008867 4008874 CGGACTGACCTAAAA GGCCC TACG GGGCC TTTGAGGTTATTGAC TERM 4291 4008874 - 4008887 + F 78 -9.5 -3.72051 | opp_overlap 4008874, overlap 4008867 CGGACTGACCTAAAA GGCCC TACG GGGCC TTTGAGGTTATTGAC TERM 4292 4008967 - 4008993 + F 72 -10.1 -2.88849 | gap 1, opp_overlap 4008956, overlap 4008962 4008968 ACATCCATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCTCTGCC TERM 4293 4008968 - 4008994 + F 84 -10.1 -3.82218 | gap 1, opp_overlap 4008956, overlap 4008962 4008967 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCTCTGCCT TERM 4294 4009072 - 4009059 - f 78 -9.5 -3.58343 | opp_overlap 4009059 GTCAGCAGTCTGAAA GGCCC TACG GGGCC TTTTTTCGTTGCTGA TERM 4295 4009059 - 4009072 + F 100 -9.5 -5.30155 | opp_overlap 4009059 GTCAGCAGTCTGAAA GGCCC TACG GGGCC TTTTTTCGTTGCTGA TERM 4296 4009212 - 4009231 + F 93 -4.2 -5.78622 | overlap 4009200 GGCCGTTGGCTAGAG TCGCCAGC GTTA GATGGTGA TTTTTTTTGGCGTAA TERM 4297 4009249 - 4009263 + F 100 -7.8 -5.26316 | TTTTTTGGCGTAATT GCTCCT GTA GGGAGC TTTTTTGTAGGATGG mscS2 4009284 - 4010153 + | hypothetical protein TERM 4298 4010189 - 4010204 + T 85 -7.5 -4.7497 | opp_overlap 4010189 GGTAAATAGATTAAA CGGGC CTCAGT GCCCG TTTTTACTCGCTCGG TERM 4299 4010204 - 4010189 - T 72 -7.5 -3.97308 | opp_overlap 4010189 GGTAAATAGATTAAA CGGGC CTCAGT GCCCG TTTTTACTCGCTCGG dnaC_27 4011728 - 4010946 - | transposase/IS protein TERM 4300 4011644 - 4011658 + g 77 -11.4 -3.3506 | overlap 4011657 CTGCCTGTTGTGACA GCGCAG GCG CTGCGC TTATAAGGCTTTCCA YP_3524 4012747 - 4011725 - | transposase for insertion sequence IS100 TERM 4301 4012769 - 4012751 - H 100 -13.2 -4.01078 | AAAAGTGACCATAAA CTCTCCTG AAT CAGGAGAG CAGATTACCCCCTGG tnp_39 4012858 - 4013316 + | transposase for the IS1541 insertion element TERM 4302 4013394 - 4013418 + T 88 -9.9 -4.1552 | opp_overlap 4013397, overlap 4013396 4013397 ATAGGCGCATATGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTGACAAAGTG TERM 4303 4013396 - 4013416 + T 100 -12.5 -3.6761 | opp_overlap 4013397, overlap 4013394 4013397 AGGCGCATATGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTGACAAAG TERM 4304 4013397 - 4013415 + T 100 -16 -2.80244 | opp_overlap 4013397, overlap 4013396 4013394 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTGACAAA TERM 4305 4013415 - 4013397 - T 100 -16 -4.8048 | opp_overlap 4013397 4013396 4013394 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTGACAAA TERM 4306 4013492 - 4013518 + T 72 -10.1 -2.88849 | gap 1, opp_overlap 4013481, overlap 4013487 4013493 ACATCCATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCTCTGCC TERM 4307 4013493 - 4013519 + T 84 -10.1 -3.82218 | gap 1, opp_overlap 4013481, overlap 4013487 4013492 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCTCTGCCT TERM 4308 4013582 - 4013597 + T 100 -11.8 -4.91084 | TTGTCAGCAGTCTGC GGGCGC TTAG GCGCCC TTTTATTATTAGGTC TERM 4309 4013746 - 4013717 - T 100 -14.5 -3.44206 | gap 1 CAAGATCCACGATAA CCTCTTCCTGAGCA GAT TG-TCAGGAAGAGG AAGTCAGCCGTCGAT aslA1 4015321 - 4013768 - | putative sulfatase agaR 4016161 - 4016937 + | DeoR family regulatory protein TERM 4310 4017297 - 4017271 - g 77 -9.5 -3.79747 | gap 1, overlap 4017272 CCATTTAGGACCAAA CCGTTGGC-AGC ACTT GCTTGCCAACGA AGCCATGGCGCATGC TERM 4311 4017296 - 4017272 - g 70 -10.8 -2.87527 | gap 1, overlap 4017271 CATTTAGGACCAAAC CGTTGGC-AGC ACTT GCTTGCCAACG AAGCCATGGCGCATG agaZ 4016987 - 4018285 + | putative tagatose 6-phosphate kinase TERM 4312 4018441 - 4018459 + G 71 -5.8 -4.41633 | overlap 4018438 4018442 CTGCATCAGGCATTA GCCGCGAG TAA CACGCGGA TTATTTTTACCGGTG agaS 4018282 - 4019448 + | putative phosphosugar isomerase manX2 4019466 - 4019963 + | putative PTS transport protein YP_3531 4020010 - 4020798 + | putative PTS permease protein TERM 4313 4021033 - 4021014 - g 76 -6.4 -4.63218 | opp_overlap 4021013, overlap 4021016 CCGCGTTGAAGAAAA TCCACGGT AACA ACCGTGCA GATTTGGCGAAATCG YP_3532 4020788 - 4021678 + | putative PTS permease protein manX3 4021764 - 4022204 + | phosphotransferase system, mannose/fructose-specific component IIA TERM 4314 4022585 - 4022595 + G 74 -6.8 -4.36914 | ACCCGCACCGCAACC CTGC TCG GCAG TTTTCTGGAGGGGCC nagA2 4022207 - 4023373 + | 2-deoxy-D-gluconate 3-dehydrogenase kduD2 4023569 - 4024324 + | 2-deoxy-D-gluconate 3-dehydrogenase TERM 4315 4025149 - 4025164 + G 79 -6.8 -4.63932 | opp_overlap 4025148 TCCTGCCCCAGAGAG CAGTGC AACA GCGCTG TTTTGTTACGGGCTG YP_3536 4024340 - 4025398 + | hypothetical protein TERM 4316 4025467 - 4025494 + F 75 -10.6 -2.77013 | overlap 4025466 ATTCATTTTGTTGCA CTGGCGCACATC ACCT GATGTGCGTGAG GTTATTGACAAAGTG TERM 4317 4025568 - 4025594 + F 72 -10.1 -2.88849 | gap 1, opp_overlap 4025557, overlap 4025563 4025569 ACATCCATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCTCTGCC TERM 4318 4025569 - 4025595 + F 84 -10.1 -3.82218 | gap 1, opp_overlap 4025557, overlap 4025563 4025568 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCTCTGCCT TERM 4319 4025658 - 4025677 + F 100 -12.2 -5.24531 | TTGTCAGCAGTCTGG CGCACATC ACCT GATGTGCG TTTTTTATAGGCGAT aslB2 4025829 - 4027055 + | putative regulatory protein TERM 4320 4027267 - 4027253 - g 84 -4.2 -5.25803 | overlap 4027256 4027260 4027264 AATCTGGATAAAAAA GCACTA AGC CAGCGC CCAGTTCCCGTACGC TERM 4321 4027621 - 4027605 - g 71 -6.5 -4.15565 | CCGATGAGGTCAAAA GCCGCGA TTA TCACGAC AACATGATCTCCGTC TERM 4322 4028639 - 4028621 - g 91 -11 -4.36903 | TGGATCAAAGATAAA CCCAAACC CGT GGCTTGGG GGCAAGATCGCTATC aslA2 4027076 - 4028683 + | putative sulfatase YP_3539 4028806 - 4030293 + | hypothetical protein gatY 4030403 - 4031257 + | tagatose-bisphosphate aldolase TERM 4323 4031455 - 4031426 - g 74 -9.9 -3.57792 | opp_overlap 4031435 GCACCTATTTTGAAA CGCCGATCAGCGC AGAT GCGCTGTTAAGCG ATCGTCTGGATCACC thiJ2 4031281 - 4031859 + | ThiJ/PfpI-family thiamine biogenesis protein YP_3542 4032110 - 4031829 - | hypothetical protein TERM 4324 4031985 - 4032011 + g 79 -13.1 -3.05844 | opp_overlap 4031991, overlap 4031987 4031991 ATAGCCAGTACCGTT GATGAACCGCA TGGTC TGCGGTTCGTC TCTTCGACTCCCCAA purR12 4033182 - 4032100 - | LacI-family regulatory protein TERM 4325 4033126 - 4033152 + g 75 -8.8 -3.8691 | overlap 4033125 CACTCTTGATACCGT GCTAATCGAAAG ACC CGTTTGATTAGC TATTTCTTGTATTTT TERM 4326 4033439 - 4033421 - H 82 -3.2 -5.56264 | opp_overlap 4033421 TTGAAATATAAAAAA CTCAAT ATTATCA ATTGAG TATATTTTATATCGC TERM 4327 4034023 - 4034005 - g 70 -2.3 -5.00616 | overlap 4034008 4034010 TGGTTCCCGAAAAAA GAACGGC CCATT GCCGCTG GATGGGCAGGGGTGG TERM 4328 4034020 - 4034008 - g 76 -6.2 -4.61482 | overlap 4034005 4034010 TTCCCGAAAAAAGAA CGGC CCATT GCCG CTGGATGGGCAGGGG exuT2 4033576 - 4034883 + | putative sugar transporter YP_3545 4035031 - 4037409 + | putative glucosidase TERM 4329 4037455 - 4037430 - T 84 -9.7 -3.84017 | opp_overlap 4037439, overlap 4037432 TAATGTTAAATACAA GACGGACTTCC TGAT GGAAGCCCGTG AGGTTATTGACAAAG TERM 4330 4037453 - 4037432 - T 100 -12.3 -3.49634 | opp_overlap 4037439, overlap 4037430 ATGTTAAATACAAGA CGGACTTCC TGAT GGAAGCCCG TGAGGTTATTGACAA TERM 4331 4037531 - 4037557 + T 73 -10.1 -2.98487 | gap 1, overlap 4037527 4037526 4037524 4037532 ACATCCATGTAGGCT CGAGCCGCGCCA TCTT TGGCGCGGA-CG CTTTACTTCCTCTGC TERM 4332 4037532 - 4037558 + T 86 -10.1 -3.98282 | gap 1, overlap 4037527 4037526 4037524 4037531 CATCCATGTAGGCTC GAG-CCGCGCCA TCTT TGGCGCGGACGC TTTACTTCCTCTGCC TERM 4333 4037622 - 4037643 + T 100 -15.9 -4.96501 | overlap 4037605 TTGTCAGCAGTCTGA CGGGCTTCC TGAT GGAAGCCCG TTTATTTTTGTACGG lacI 4038795 - 4037722 - | lac repressor lamB 4039067 - 4040326 + | maltoporin TERM 4334 4040505 - 4040530 + T 100 -16.3 -4.73108 | TCGGTTATTCTTCTA TGCTCACTACC CTTA GGTAGTGAGCA TTTTAGTTTTATACC TERM 4335 4041079 - 4041100 + T 73 -10.1 -2.9186 | opp_overlap 4041079 GTCGATGTAAAAAAA CGCCCACTC GGCT GAATGGGCG TGTATGGCATTCAGT TERM 4336 4041100 - 4041079 - T 100 -12.3 -5.47218 | opp_overlap 4041079 GTCGATGTAAAAAAA CGCCCACTC GGCT GAATGGGCG TGTATGGCATTCAGT bgaB 4043182 - 4041122 - | puative beta-galactosidase TERM 4337 4041303 - 4041269 - G 71 -7.8 -3.99324 | overlap 4041273 TTCTACCACGATAAA TTCACTCTCACCATCG GTA CGACGGTGAGCGGTAA CCCCATAAGGGAACT TERM 4338 4041299 - 4041273 - G 77 -13 -2.7242 | overlap 4041269 ACCACGATAAATTCA CTCTCACCATCG GTA CGACGGTGAGCG GTAACCCCATAAGGG TERM 4339 4041581 - 4041612 + g 74 -7.4 -4.15044 | gap 1, overlap 4041568 4041567 TGCAAGTCCTTGGAC TTGATTGCTCTCGCC ATC GGCCAGA-CAGTCAA TTTCTTCGGACCAGA TERM 4340 4041974 - 4041961 - G 76 -5.3 -4.8622 | TTTCCCAATCAAAAA TGATG GCAA CATCA GCGTCTACTTTACTT TERM 4341 4043211 - 4043231 + r 83 -11.9 -2.60571 | opp_overlap 4043207, overlap 4043210 ATAATAAATACTTGG TGTTGCCCA TAA TGGGCAACG ATTAATTAAAAACTT YP_3550 4044435 - 4043233 - | putative galactosidase malG7 4045291 - 4044440 - | putative maltodextrin permease protein malF7 4046610 - 4045303 - | putative maltodextrin transport permease TERM 4342 4045709 - 4045699 - G 74 -4.6 -4.87389 | CATGGCAAAAACAAA CGGG AAA CCCA GCCACGTCTGCATCA malE2 4048032 - 4046770 - | putative sugar-binding protein TERM 4343 4048331 - 4048311 - H 84 -3.9 -5.50313 | opp_overlap 4048312, overlap 4048313 CATAAAATCAAAAAA CGCACCTCA GGG TGATGTGTG ATGGCCCCCTGACTG YP_3554 4048368 - 4049474 + | sugar transport ATP-binding protein TERM 4344 4049549 - 4049527 - f 73 -9.1 -3.46509 | overlap 4049521 GGTTAAGAATACCAA GCGGGTTTC CTGTT GAAGCCCGC TGAATATTAAGATAG rbsA4 4049934 - 4051541 + | sugar transport ATP-binding protein rbsC3 4051607 - 4052617 + | sugar transport system permease TERM 4345 4053074 - 4053046 - g 80 -2.3 -5.52384 | overlap 4053049 CTTTTATGAAAAAAA CAATGCTACAAAC TCT GCTTGCTGCAACG CTGATACTTTCCTTT TERM 4346 4053071 - 4053049 - g 74 -4.8 -4.8487 | overlap 4053046 TTATGAAAAAAACAA TGCTACAAAC TCT GCTTGCTGCA ACGCTGATACTTTCC rbsB11 4053015 - 4054037 + | sugar-binding periplasmic protein TERM 4347 4054058 - 4054085 + F 100 -12.7 -3.57792 | opp_overlap 4054047 ATGATCGCTATCGCC CCCGGCAGCGG CAAAAT CTGCTGTCGGG TTTGAGGGTAAATCC YP_3558 4054816 - 4055334 + | hypothetical protein spr3 4055710 - 4056567 + | hypothetical protein YP_3560 4056684 - 4056529 - | hypothetical protein TERM 4348 4056574 - 4056586 + g 74 -4.8 -4.82901 | opp_overlap 4056569 AGCCAATAACCGTTT GGTG CTGCT CACC TTTTTATCAGAAGGG TERM 4349 4056764 - 4056777 + H 77 -3.9 -5.21709 | overlap 4056755 CCCAGTTCAACATTT TGATT TAAA AATCA TTTTTTGATATCCCC TERM 4350 4056889 - 4056907 + H 75 -7.4 -4.27861 | opp_overlap 4056879 4056882, overlap 4056890 TAAAAGCACGCGGGA TGCGTTGC GCA GTAACGCG TTTTAGATATATCTT TERM 4351 4057582 - 4057558 - g 73 -9.4 -3.80733 | gap 1 CTCACGCCAGAACAA GTAGCG-CGTA TTAA TACGGCGCTAC TGGCTGCGGTAGACA YP_3561 4056991 - 4057671 + | hypothetical protein YP_3562 4057671 - 4057991 + | hypothetical protein YP_3563 4058395 - 4058090 - | hypothetical protein YP_3564 4059391 - 4058612 - | hypothetical protein YP_3565 4059668 - 4059453 - | hypothetical protein TERM 4352 4060498 - 4060509 + r 70 -5.8 -4.36914 | overlap 4060494 GTGTCAGCCTAGAGC TGGG TAGC CCCA TTTTCTGAAACCAGG YP_3567 4063041 - 4060717 - | hypothetical protein TERM 4353 4061345 - 4061355 + g 76 -3.2 -5.11836 | TGCTGTTGTAAAAGT GCTT TTT GAGC TTTTGTTTTGAGTAT YP_3568 4063570 - 4063286 - | putative colicin immunity protein YP_3569 4063874 - 4063617 - | hypothetical protein YP_3570 4064387 - 4064193 - | hypothetical protein TERM 4354 4064228 - 4064245 + g 73 -2.7 -4.93877 | gap 1, overlap 4064230 GCTTGTAGGCTTCTT TG-GCTTC GTT GAGGCTCA TTTTATTTGCTCCAC YP_3571 4065922 - 4064384 - | hypothetical protein YP_3572 4067568 - 4066426 - | hypothetical protein YP_3573 4067897 - 4068202 + | hypothetical protein YP_3574 4068215 - 4068451 + | hypothetical protein YP_3575 4068457 - 4068789 + | hypothetical protein TERM 4355 4068870 - 4068883 + F 75 -3.1 -5.18866 | opp_overlap 4068870, overlap 4068874 TGACCTAAAACGACA GGAAT AAAG GTTCC TTTTATTTATTTGCC TERM 4356 4069106 - 4069055 - g 74 -6.6 -4.40993 | gap 1, opp_overlap 4069090 TATAAATTATTAAAA CAAAAGCGCT-TCCCGCCACC GATAAAAATAG GGGGGCGGGCTATCGCTTTTG TTGAAAGTGAGGTGA alpA3 4068971 - 4069171 + | putative regulatory protein TERM 4357 4069384 - 4069397 + G 79 -5.2 -5.00616 | GCCTTTCTCTTTCCA CGGC ATATAA GCCG TTTTTTGCACCACAA TERM 4358 4069748 - 4069710 - g 74 -6.6 -4.2828 | opp_overlap 4069714, overlap 4069714 4069734 GCGGATGTATCAAAA GGAACGCCCCGACATCAC TCA ATACTGCCGGGGCGTTTA TCCACCACGGAGCAA TERM 4359 4069744 - 4069714 - g 85 -11.8 -3.72073 | opp_overlap 4069714, overlap 4069710 4069734 ATGTATCAAAAGGAA CGCCCCGACATCAC TCA ATACTGCCGGGGCG TTTATCCACCACGGA YP_3577 4069168 - 4069827 + | hypothetical protein TERM 4360 4070719 - 4070706 - g 72 -3.7 -4.82901 | overlap 4070707 TTGTCCGCAGAAAAA GCCGC CAAC GCGGT CAATGGTTGGGTGAC TERM 4361 4072148 - 4072137 - g 80 -2.2 -5.5208 | GCAGAATACAAAAAA GCCA GAAC TGAC AAAGGGTTCCGCTAC YP_3578 4069956 - 4072247 + | putative primase TERM 4362 4072353 - 4072319 - T 100 -10.2 -5.26155 | opp_overlap 4072319 ATACAAAGATAAAAA CTGACTGAATAGTT TACTAAT AACTGTTCAGTCAG TATTCAGAGGTGTTC TERM 4363 4072319 - 4072353 + T 93 -12.4 -3.04248 | opp_overlap 4072319 ATACAAAGATAAAAA CTGACTGAATAGTT TACTAAT AACTGTTCAGTCAG TATTCAGAGGTGTTC TERM 4364 4072429 - 4072398 - T 71 -4.4 -4.7497 | GGCAGGTATTAAAAA CTGAACACCTGAAC AGTT GCTGAAGAGTTCAG CGGGGAGTATTCAGA hipB4 4073045 - 4072647 - | hypothetical protein YP_3580 4073341 - 4073045 - | hypothetical protein TERM 4365 4073380 - 4073394 + r 70 -7.2 -3.87075 | opp_overlap 4073378 4073380, overlap 4073383 TCCACTTAATAAATA TAACCT AGT AGGTTA TTTATAGCAAGTCAT hipB5 4073867 - 4073505 - | putative DNA binding protein relE 4074190 - 4073930 - | hypothetical protein TERM 4366 4074453 - 4074480 + r 80 -10.5 -3.54424 | GGTCAGATATAGTGC CCCCGCAGCGG CAAAAT CCGTTGCTGGG TTTAGCAGCCTGAGA TERM 4367 4074973 - 4074988 + r 75 -9 -3.5936 | opp_overlap 4074973 CTCTAAATACAAAAA GGCATC GTGA GATGCC TTTAAAAAGTTTGGA TERM 4368 4074988 - 4074973 - R 100 -9 -5.19879 | opp_overlap 4074973 CTCTAAATACAAAAA GGCATC GTGA GATGCC TTTAAAAAGTTTGGA int4 4076252 - 4075038 - | integrase TERM 4369 4076656 - 4076641 - R 100 -11.8 -4.7497 | CTGACTCAGTAAAAA GGGCGC CGTA GCGCCC TGAGGAATTTATCGT lysS 4078202 - 4076685 - | lysyl-tRNA synthetase prfB 4079144 - 4078212 - | peptide chain release factor 2 TERM 4370 4079174 - 4079196 + r 100 -13.4 -4.0802 | CGGGTTCATTCCAGA CGTCGGGCTG TTC CAGCTCGGCG TTTACTTCTTCCAGT recJ 4081222 - 4079489 - | ssDNA exonuclease RecJ TERM 4371 4080967 - 4080942 - G 79 -11.1 -3.56643 | overlap 4080943 CCCATACTGCGCAAA GCCAGCACCGC CAAC GCGGTACTGGT CGCGCCGTCAGCATC TERM 4372 4080966 - 4080943 - G 82 -14.6 -2.73771 | overlap 4080942 CCATACTGCGCAAAG CCAGCACCGC CAAC GCGGTACTGG TCGCGCCGTCAGCAT dsbC 4081945 - 4081229 - | thiol:disulfide interchange protein DsbC xerD 4082875 - 4081976 - | site-specific tyrosine recombinase XerD fldB 4082982 - 4083500 + | flavodoxin FldB TERM 4373 4083531 - 4083569 + T 77 -11.2 -2.8655 | opp_overlap 4083541, overlap 4083536 4083537 CCTGTTACATCAGAG CTCAATTTAACGGGCA CCCGATA TGCCCGTTAAGTTTAG TCTAGTCTAGCTGCG TERM 4374 4083536 - 4083564 + T 84 -9.7 -3.8766 | opp_overlap 4083541, overlap 4083531 4083537 TACATCAGAGCTCAA TTTAACGGGCA CCCGATA TGCCCGTTAAG TTTAGTCTAGTCTAG TERM 4375 4083537 - 4083563 + T 79 -11 -2.92114 | opp_overlap 4083541, overlap 4083536 4083531 ACATCAGAGCTCAAT TTAACGGGCA CCCGATA TGCCCGTTAA GTTTAGTCTAGTCTA creD 4085068 - 4083590 - | hypothetical protein TERM 4376 4084601 - 4084582 - G 70 -9.2 -3.55444 | CGCTGAGTGGCGAAA TGCGCTGG ATAC CCCGCGCA TCACTCAGTGCCAGC creC 4086586 - 4085168 - | sensory histidine kinase CreC creB 4087312 - 4086611 - | DNA-binding response regulator CreB YP_3593 4087734 - 4087309 - | hypothetical protein YP_3594 4087981 - 4087715 - | hypothetical protein TERM 4377 4088100 - 4088081 - H 78 -10 -3.54382 | overlap 4088064 CGTTAATATAACTAA CGGGAATG TTAC CACTCCCG GGATAGGGGGTTAAG TERM 4378 4088124 - 4088138 + H 80 -2.8 -5.52384 | opp_overlap 4088124 4088126, overlap 4088126 GGTTAAGGTACTAAA TACACT GCA AGTGCA TTTTTTTAATCGCCC TERM 4379 4088691 - 4088680 - g 74 -7.2 -4.14739 | GTAGCCAGGCCAAAA CCGC GCTG GCGG AAATCTTTACTGAAT YP_3595 4088298 - 4089290 + | putative global regulator TERM 4380 4089305 - 4089295 - T 73 -5.4 -4.66814 | AAGATAAATAATAAA GAGT TCT ACTC TACAGAGACCGGTTA TERM 4381 4089306 - 4089333 + T 100 -18.6 -5.23292 | opp_overlap 4089312 4089314 TAAAGAGTTCTACTC TACAGAGACCGG TTAA CCGGTCTCTGTA TTTTGTTTTATATCA TERM 4382 4089327 - 4089312 - T 75 -10.4 -2.89564 | opp_overlap 4089306, overlap 4089314 GTTCTACTCTACAGA GACCGG TTAA CCGGTC TCTGTATTTTGTTTT YP_3596 4089893 - 4089363 - | hypothetical protein YP_3597 4090819 - 4090118 - | putative hemolysin III YP_3598 4092166 - 4091021 - | hypothetical protein TERM 4383 4093670 - 4093687 + r 73 -9.8 -3.04144 | overlap 4093685 TTCCCCCCGTTGCTG CCGCCC CGACAA GGGCGG TGTTACCAATGCCAA TERM 4384 4093858 - 4093844 - R 74 -10 -3.1506 | AAAGCTGGCTACCAA CTACCG CAT CGGTAG AGGTAGATGAAATCG YP_3600 4094365 - 4094201 - | hypothetical protein TERM 4385 4094523 - 4094510 - R 70 -5.3 -4.47183 | overlap 4094516 TATTATCTAAACAAA CCATA ACAT TATGG AATGTCGGCTAGTTG YP_3601 4095851 - 4095414 - | hypothetical protein TERM 4386 4096112 - 4096086 - R 72 -7.2 -3.9749 | gap 1, opp_overlap 4096095, overlap 4096087 4096103 AGGCAGAAGAGTAAA GCGTCCGCGCC AGAGAA GGCGCGG-CTC GAGCCTACATGGATG TERM 4387 4096187 - 4096212 + r 82 -8.2 -4.26903 | opp_overlap 4096186 4096187, overlap 4096191 CACTTTGTCAATAAC CTCAGGGCCG CTTTCA CGGCCCTTGG TTTTGCTCAGATGAG TERM 4388 4096191 - 4096208 + r 80 -9.8 -3.71672 | opp_overlap 4096186 4096187, overlap 4096187 TTGTCAATAACCTCA GGGCCG CTTTCA CGGCCC TTGGTTTTGCTCAGA gcvP 4099108 - 4096229 - | glycine dehydrogenase TERM 4389 4099289 - 4099314 + r 71 -9 -3.23979 | overlap 4099283 TTTAACCTACTCGGC GTCAGGGCCA ATAAAA TGGCCCTCAC TTGAGTTACTCTTCA gcsH 4099706 - 4099320 - | glycine cleavage system protein H gcvT 4100872 - 4099775 - | glycine cleavage system aminomethyltransferase T TERM 4390 4101029 - 4101019 - R 75 -8.2 -3.76167 | opp_overlap 4101018, overlap 4101017 CCATAAGCTAAAATA GGCG AGG CGCC CTCTTCAGGCGACAA visC 4102813 - 4101593 - | hypothetical protein ubiH 4104164 - 4102986 - | 2-octaprenyl-6-methoxyphenyl hydroxylase pepP2 4105563 - 4104250 - | proline aminopeptidase P II TERM 4391 4104719 - 4104705 - G 75 -9.2 -3.91032 | opp_overlap 4104701 4104706, overlap 4104706 GAACGATGTCATAAA CCGCCC GCT GAGCGG GGGTAAATTTGCCAT YP_3608 4106229 - 4105651 - | hypothetical protein YP_3609 4106518 - 4106895 + | Z-ring-associated protein TERM 4392 4107411 - 4107423 + G 79 -9.1 -4.17516 | AATCCAGCAAGCTCA CACGG TAG CCGTG TTTCTCTCCTTTGAC YP_3610 4107259 - 4107855 + | putative 5-formyltetrahydrofolatecyclo-ligase-family protein TERM 4393 4107908 - 4107882 - T 100 -22.4 -6.02914 | TCGAGATAAAAAAAA CACCGGGGATCC TAT GGATCCCCGGTG TCAGACTGCTGACAA TERM 4394 4107997 - 4107971 - T 72 -7.2 -3.9749 | gap 1, opp_overlap 4107980, overlap 4107972 AGGCAGAAGAGTAAA GCGTCCGCGCC AGGGAG GGCGCGG-CTC GAGCCTACATGGATG TERM 4395 4108076 - 4108102 + T 88 -10.8 -3.8901 | opp_overlap 4108072 4108071 TTGTCAATAACCTCA CACCTGAGATCC TAT GGATCCCAGGCG TTTAATCATTTCAGG serA2 4109463 - 4108120 - | D-3-phosphoglycerate dehydrogenase TERM 4396 4108166 - 4108176 + g 79 -6.8 -4.63542 | GGAATGGCCTTCATC GCCT GCA AGGC TTTTTCCGCATTATC TERM 4397 4109043 - 4109009 - G 73 -12.2 -2.57974 | opp_overlap 4109016, overlap 4109005 ATCAGCAGCAACTCA CCCAATACCATTTCGG CTA CCGAACGGGTATTGGA GAAAGGCGCATTGAA TERM 4398 4109664 - 4109628 - R 71 -2.2 -5.22039 | overlap 4109619 TTCAAAGGCAAAAAA TTATCAGGGTGAAGCC AAATA AACGACACCCTGAAAA ATTTTAGCCAATCAC rpiA2 4110324 - 4109668 - | ribose-5-phosphate isomerase A iciA 4110666 - 4111574 + | chromosome replication initiation inhibitor protein TERM 4399 4111569 - 4111601 + T 71 -4.9 -4.64676 | GACTCGTTTATTGGG CAGTAGCTGTTTA TGTTTAC TGAGCAGCAACTG TTTTATTGGCAGTAG YP_3614 4112427 - 4111585 - | hypothetical protein TERM 4400 4112149 - 4112164 + g 79 -6.8 -4.64766 | AAAGTATTGCGCGAC GCGGGT ATCG ACCTGC TTTTTGGCATCTGCA TERM 4401 4112777 - 4112795 + H 100 -13.2 -4.01078 | CCAGGGGGTAATCTG CTCTCCTG ATT CAGGAGAG TTTATGGTCACTTTT YP_3616 4112799 - 4113821 + | transposase for insertion sequence IS100 TERM 4402 4113902 - 4113888 - g 77 -11.4 -3.3506 | overlap 4113879 TGGAAAGCCTTATAA GCGCAG CGC CTGCGC TGTCACAACAGGCAG dnaC_28 4113818 - 4114600 + | transposase/IS protein TERM 4403 4114856 - 4114838 - T 100 -16 -3.07307 | opp_overlap 4114838 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 4404 4114838 - 4114856 + T 100 -16 -4.36914 | opp_overlap 4114838 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 4405 4114902 - 4114875 - T 100 -9.3 -5.24129 | gap 1, opp_overlap 4114879 TCTGGGCACAAAAAA TGGAGCAA-ACG ACGGA CGTCTTGCTCCA TTAAAATAAAGTAGG mutT8 4115326 - 4114940 - | nucleoside triphosphate pyrophosphohydrolase TERM 4406 4115409 - 4115385 - R 89 -7.2 -4.97888 | gap 1, overlap 4115389 AAAAAAACTTAAAAA TAAAGGGCGGT ATTA ACCGCCC-TCA GACTGCTGACAAACC TERM 4407 4115406 - 4115389 - R 100 -12.7 -4.92828 | overlap 4115385 AAACTTAAAAATAAA GGGCGGT ATTA ACCGCCC TCAGACTGCTGACAA TERM 4408 4115495 - 4115469 - R 84 -10.1 -3.82218 | gap 1, opp_overlap 4115478, overlap 4115470 4115485 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 4409 4115496 - 4115470 - R 72 -10.1 -2.88849 | gap 1, opp_overlap 4115478, overlap 4115469 4115485 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT TERM 4410 4115574 - 4115591 + r 100 -12.7 -4.21343 | opp_overlap 4115569 4115570, overlap 4115569 TTGTCAATAACCTCA GGGCGGT ATTA ACCGCCC TTTATCTATATTACA secA 4118335 - 4115621 - | preprotein translocase subunit SecA TERM 4411 4117219 - 4117229 + g 76 -6.8 -4.50661 | opp_overlap 4117219 4117218 GGAAAGTGATAGAAG CCAG TGT CTGG TTTTCATTCTGGATT TERM 4412 4118246 - 4118266 + g 70 -4.7 -4.65895 | overlap 4118249 AATATCAGGTTCCAT GCGGTTGAT GAC ATCAACTAC TTTTTGCATGCGGCG YP_3621 4118946 - 4118413 - | SecA regulator SecM TERM 4413 4119486 - 4119449 - g 71 -11.4 -2.71731 | opp_overlap 4119439 GTGATCTTGGAACGA CTGGCTGCGTTGGC CGGAGAGGGT GCCAACGCAACCAA GCGTGATAAGTAGCT YP_3622 4118969 - 4119499 + | hypothetical protein lpxC 4120586 - 4119666 - | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase TERM 4414 4120507 - 4120517 + g 79 -5.4 -5.04385 | GGCGCGGGTCGCATT GTCA GCG TGAC TTTTTTACCGGTGTG ftsZ 4121836 - 4120613 - | cell division protein FtsZ TERM 4415 4121554 - 4121587 + g 72 -8.1 -3.85522 | overlap 4121556 TAAAGACCATATCCG CACCGTCAAGCGCTG CACG CAGAGCTTCACGGTC TTCTTCTGCTGAATT TERM 4416 4121556 - 4121585 + g 77 -10.7 -3.50808 | overlap 4121554 AAGACCATATCCGCA CCGTCAAGCGCTG CACG CAGAGCTTCACGG TCTTCTTCTGCTGAA ftsA 4123165 - 4121909 - | cell division protein FtsA ftsQ 4124019 - 4123192 - | cell division protein FtsQ TERM 4417 4123646 - 4123658 + g 76 -7.7 -4.30014 | GCGAAGGGCACGTAC TCCAC CAG GTGGA TTTTAAGTTCATCCG TERM 4418 4123959 - 4123972 + g 70 -3.1 -4.82901 | gap 1 ATTGGCTCCCGTTAC TGC-GC CGG GCTGCA TTTTTCTCCGCCGCA ddl 4124941 - 4124021 - | D-alanine--D-alanine ligase murC 4126457 - 4124934 - | UDP-N-acetylmuramate--L-alanine ligase murG 4127617 - 4126547 - | N-acetylglucosaminyl transferase ftsW2 4128816 - 4127614 - | cell division protein FtsW murD 4130132 - 4128816 - | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase TERM 4419 4129294 - 4129264 - G 79 -11.3 -3.55622 | gap 2 GTCAAGGCTTTCAAA CTGGATGCCCGTGGG ATA CCCACGG-CATC-AG CTAATGCCAGGGCGG mraY 4131217 - 4130135 - | phospho-N-acetylmuramoyl-pentapeptide-transferase murF 4132587 - 4131211 - | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase murE 4134071 - 4132584 - | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase ftsI 4135821 - 4134058 - | penicillin-binding protein 3 TERM 4420 4134594 - 4134578 - G 70 -8.7 -3.60098 | opp_overlap 4134578 4134580 AGCCCGTAGCCGAAA GAGAAGG TGG CCCTCTC TATGTCAGACCACCG TERM 4421 4135777 - 4135757 - G 74 -6.8 -4.31085 | opp_overlap 4135758, overlap 4135758 CACAGCAACGCAAAA CGCCAGCT AATAA AGCTGGCT TGTTCTTCCTGACGC TERM 4422 4135776 - 4135758 - G 71 -10.3 -3.17928 | opp_overlap 4135758, overlap 4135757 ACAGCAACGCAAAAC GCCAGCT AATAA AGCTGGC TTGTTCTTCCTGACG TERM 4423 4135758 - 4135776 + g 84 -10.3 -3.99374 | opp_overlap 4135757 4135758 ACAGCAACGCAAAAC GCCAGCT AATAA AGCTGGC TTGTTCTTCCTGACG ftsL 4136204 - 4135887 - | cell division protein FtsL mraW 4137163 - 4136201 - | S-adenosyl-methyltransferase MraW YP_3638 4137624 - 4137166 - | cell division protein MraZ TERM 4424 4138276 - 4138302 + H 72 -10.1 -2.88849 | gap 1, opp_overlap 4138265, overlap 4138271 4138277 ACATCCATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCTCTGCC TERM 4425 4138277 - 4138303 + H 84 -10.1 -3.82218 | gap 1, opp_overlap 4138265, overlap 4138271 4138276 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCTCTGCCT TERM 4426 4139105 - 4139117 + G 83 -5.5 -5.09173 | CAATGGTTATGGGGG TGGCC TAC GGCTA TTTTTTGGAATATTG YP_3639 4138711 - 4139166 + | hypothetical protein TERM 4427 4139265 - 4139282 + T 89 -11.3 -3.47322 | opp_overlap 4139265 TGTCAGCAATCAAAA TCAGGGC GGGT GCCCTGA TTCGTTATAGTGAAC TERM 4428 4139282 - 4139265 - T 100 -11.3 -4.45544 | opp_overlap 4139265 TGTCAGCAATCAAAA TCAGGGC GGGT GCCCTGA TTCGTTATAGTGAAC fruR 4140307 - 4139297 - | DNA-binding transcriptional regulator FruR TERM 4429 4140290 - 4140274 - G 70 -9.3 -3.53012 | opp_overlap 4140273 CCGTTGTGCGCGAAA CGCCCGC AAG GCGCGCG ATCTCATCCAGTTTC TERM 4430 4140356 - 4140343 - R 74 -6.7 -4.33165 | overlap 4140348 GTAAAGTGATGAAAA GCAGA GCGC TCTGC CGAGAGCCAGCATCC TERM 4431 4140738 - 4140706 - R 100 -11.3 -5.54403 | opp_overlap 4140713, overlap 4140712 4140713 AAAAAATAAGAAAAA TAAATATCCTCCGGC ATA GCCGGAGGTTTTTCA TATGCGCCTATAAGG TERM 4432 4140732 - 4140712 - R 100 -12.5 -4.13123 | opp_overlap 4140713, overlap 4140706 4140713 TAAGAAAAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 4433 4140731 - 4140713 - R 100 -16 -3.05433 | opp_overlap 4140713, overlap 4140712 4140706 AAGAAAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 4434 4140713 - 4140731 + r 100 -16 -4.8048 | opp_overlap 4140713 4140712 4140706 AAGAAAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC tnp_40 4141321 - 4140812 - | transposase for the IS1541 insertion element TERM 4435 4141383 - 4141401 + r 100 -16 -4.36914 | opp_overlap 4141383 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 4436 4141401 - 4141383 - R 100 -16 -3.07307 | opp_overlap 4141383 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 4437 4141421 - 4141440 + r 86 -10.6 -3.83155 | opp_overlap 4141422, overlap 4141422 CTGGGCACAAAAAAA ACCCGCGC ATTT GCGCGGGC TTGTTAATCTTGATG TERM 4438 4141422 - 4141439 + r 95 -14.1 -2.8917 | opp_overlap 4141422, overlap 4141421 TGGGCACAAAAAAAA CCCGCGC ATTT GCGCGGG CTTGTTAATCTTGAT TERM 4439 4141439 - 4141422 - R 100 -14.1 -5.93809 | opp_overlap 4141422 4141421 TGGGCACAAAAAAAA CCCGCGC ATTT GCGCGGG CTTGTTAATCTTGAT YP_3642 4141914 - 4141699 - | hypothetical protein TERM 4440 4142203 - 4142221 + H 72 -6.2 -4.35885 | opp_overlap 4142196 4142203 4142202, overlap 4142196 ATTATAATTAAAATT TTTATATT ACT AATATAAA TTTGTTGTGGTGGCT TERM 4441 4143273 - 4143257 - g 80 -2.2 -5.39721 | opp_overlap 4143257 TCATTAGATAAAAAA GGGTCA TTCAG TGAGCC TTATTACGACTCAAC leuO 4142591 - 4143547 + | leucine transcriptional activator YP_3644 4143893 - 4144099 + | hypothetical protein fAA1 4144096 - 4145901 + | putative AMP-binding enzyme-family protein TERM 4442 4145920 - 4145959 + F 100 -13.6 -3.5362 | overlap 4145918 4145922 GTTCACCATTCCTCC CCGCAGTGACCGGTGTTA AGTC TCACACTGGTCGCTGCTG TCTTTCTGACCGTTC TERM 4443 4145922 - 4145957 + F 100 -14.8 -3.33798 | overlap 4145920 4145918 TCACCATTCCTCCCC GCAGTGACCGGTGTTA AGTC TCACACTGGTCGCTGC TGTCTTTCTGACCGT TERM 4444 4146292 - 4146278 - f 75 -5.6 -4.64159 | opp_overlap 4146280, overlap 4146280 ACAAATAAGAATAAA GAGGCG TTG CGCCTT TCCTACAGAATATCG TERM 4445 4146280 - 4146290 + F 73 -8.2 -3.73402 | opp_overlap 4146278 4146280 AAATAAGAATAAAGA GGCG TTG CGCC TTTCCTACAGAATAT TERM 4446 4146290 - 4146280 - f 75 -8.2 -3.90009 | opp_overlap 4146280, overlap 4146278 AAATAAGAATAAAGA GGCG TTG CGCC TTTCCTACAGAATAT TERM 4447 4146809 - 4146832 + GF 81 -11 -3.36492 | gap 1 CCTTTTATCTGGCAT CCACTGG-CCG TCC CGGTCCGGTGG TTATCGACTTGCCAA ilvI 4146361 - 4148088 + | acetolactate synthase 3 catalytic subunit ilvH 4148061 - 4148585 + | acetolactate synthase 3 regulatory subunit TERM 4448 4148614 - 4148634 + F 100 -13.3 -5.24129 | CGCTCTAATGATCGG GCTCAGCGC ATA GCGTTGAGC TTTTTTGTGCCCAGA TERM 4449 4148671 - 4148653 - f 100 -16 -4.36914 | opp_overlap 4148653 TTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC TERM 4450 4148653 - 4148671 + F 100 -16 -3.07307 | opp_overlap 4148653 TTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC tnp_41 4148733 - 4149242 + | transposase for the IS1541 insertion element TERM 4451 4149316 - 4149348 + F 100 -11.3 -4.4009 | opp_overlap 4149323, overlap 4149320 4149322 4149323 CCTTATAGGCGCATA TGAAAAACCTCCGGC TAT GCCGGAGGATATTTA TTTTATCCGCTGAGC TERM 4452 4149320 - 4149344 + F 100 -9.9 -4.77775 | opp_overlap 4149323, overlap 4149316 4149322 4149323 ATAGGCGCATATGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTTTATCCGCT TERM 4453 4149322 - 4149342 + F 100 -12.5 -3.99938 | opp_overlap 4149323, overlap 4149320 4149316 4149323 AGGCGCATATGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTTTATCCG TERM 4454 4149341 - 4149323 - f 100 -16 -4.8048 | opp_overlap 4149322 4149320 4149316 4149323 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTTATCC TERM 4455 4149323 - 4149341 + F 100 -16 -2.98878 | opp_overlap 4149323, overlap 4149322 4149320 4149316 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTTATCC leuA 4149389 - 4150951 + | 2-isopropylmalate synthase leuB2 4150954 - 4152045 + | 3-isopropylmalate dehydrogenase TERM 4456 4152105 - 4152089 - gf 70 -2.9 -4.80882 | opp_overlap 4152090, overlap 4152090 ACGTTATACCAAAAA TTGTACG ATG CGCACAT TGTGCATGAAGCCCC TERM 4457 4152546 - 4152534 - gf 75 -9.1 -3.64703 | TGTTGGCGACCCAAA CCCTG AAG CAGGG GCGAGCCAAAACCAT leuC 4151978 - 4153477 + | isopropylmalate isomerase large subunit TERM 4458 4153558 - 4153545 - g 70 -8.1 -3.78022 | GTTAGATGCAGCAAA CGTCG ATAC CGACG CGATTATCCCTAAGC leuD 4153492 - 4154094 + | isopropylmalate isomerase small subunit TERM 4459 4154235 - 4154205 - T 86 -12 -3.20896 | gap 1, overlap 4154203 4154201 TAAGTAACTAATAGA TTGTTGGTGCCGG GTCGTA CCGGC-CCAACAA GTAACACGTTTAACT setA 4155516 - 4154335 - | putative efflux protein TERM 4460 4154989 - 4154979 - G 80 -3.2 -5.31855 | CACTAATAACAAAAA TACC GGC GGCA ATGCTAAACATCAGC TERM 4461 4155551 - 4155540 - R 71 -4.4 -4.84359 | CCAGCGCCAGAAAAA GCTA TTAT TAGC ATAATCATAATGGTG YP_3654 4155942 - 4155769 - | hypothetical protein TERM 4462 4156001 - 4155980 - H 100 -8.7 -5.93252 | GGGAAAAAGAAAAAA GCCAGCAGA AAAA CCTACTGGC TGGTGAAAAACACCA oppA5 4156180 - 4157841 + | transcriptional regulator SgrR YP_3656 4158226 - 4157942 - | hypothetical protein TERM 4463 4159018 - 4159008 - gH 74 -4.6 -4.75174 | GATGGAAGGTAAAAA CAGC CAG GCCG ATGTGATTTTAGGGT TERM 4464 4159089 - 4159067 - gH 74 -7 -4.30987 | opp_overlap 4159067, overlap 4159063 AGGCGGCAGAACAAA CCGGCTTG TTTACCC CAAGCCAG GTTGATACCCGTAAC tbpA 4158781 - 4159773 + | thiamine transporter substrate binding subunit TERM 4465 4159779 - 4159796 + GF 77 -10.5 -3.14931 | CAGCCGTTAATCGCG CCCTGGC TATG GCCGGGG TTGCTGGCCGCTGGG TERM 4466 4161128 - 4161161 + GF 84 -10.9 -3.58905 | opp_overlap 4161127 4161126, overlap 4161130 4161134 ACGCGCCCTGAAACG CCCACTGGCTCAGGC GCTG GCCTTTGCCAGTGTG TTATCTATCGGCGAT TERM 4467 4161130 - 4161159 + GF 89 -12.1 -3.37198 | opp_overlap 4161127 4161126, overlap 4161128 4161134 GCGCCCTGAAACGCC CACTGGCTCAGGC GCTG GCCTTTGCCAGTG TGTTATCTATCGGCG thiP 4159737 - 4161356 + | thiamine transporter membrane protein thiQ 4161322 - 4162053 + | thiamine transporter ATP-binding subunit dedA5 4162889 - 4162122 - | DedA family membrane protein TERM 4468 4162453 - 4162430 - G 76 -8.1 -4.2074 | CGGGGAAGAGATAAA TCGGCGGCC ATGTCA GGCCACCAA TCACACTGGGTAAGG TERM 4469 4163903 - 4163914 + G 71 -7.2 -4.09805 | GCATTTCTTTGCTTC CGCC GCCG GGCG TTTAATTATTGATGG TERM 4470 4164599 - 4164625 + G 78 -3.7 -5.1101 | gap 2, overlap 4164600 TATGAATGCCTTTTA TGGC-GT-GCTGG GTT CCAGCGGCTGCCG TTTTTTCGATCCTCG polB 4163085 - 4165454 + | DNA polymerase II TERM 4471 4166262 - 4166300 + G 90 -11.7 -4.08216 | opp_overlap 4166273 4166274 ACAGGATCGCTTATT CGCCGGTCAAATCGATC GCATG GATCGCTTTGCCCTGCG TTTTCGCGCCCGTAA hepA 4165915 - 4168821 + | ATP-dependent helicase HepA TERM 4472 4168942 - 4168968 + T 70 -7.2 -3.82218 | gap 1, opp_overlap 4168930, overlap 4168941 CATCCATGTAGGCTC GAG-CCGCGCC CTCCCT GGCGCGGACGC TTTACTCCTCTGCCT TERM 4473 4169031 - 4169053 + T 100 -13.5 -5.71712 | TTGTCAGCAGTCTGA TATCCGGGG CATTC CCCCGGATA TTTTTTTGTCTGACG YP_3663 4169436 - 4169077 - | hypothetical protein icmF3 4172946 - 4169452 - | hypothetical protein YP_3665 4174592 - 4172955 - | hypothetical protein TERM 4474 4174191 - 4174163 - GR 71 -8.2 -3.42256 | gap 1, overlap 4174161 4174182 AGGCACCCAATAACA TCCCAGGGCGCTC ATAT AAGC-CCCTGGAA ATGCCATGCGGCATA TERM 4475 4174332 - 4174351 + gr 74 -9.2 -3.38812 | overlap 4174330 ATACAAAGTGACCGG TGGCGCAC TCGT GCGCGCCA TGTTGTTGCCCGAGG YP_3666 4175935 - 4174562 - | hypothetical protein TERM 4476 4175128 - 4175140 + gr 71 -4.8 -4.65895 | opp_overlap 4175102 ATTGGAACAACTGCT CAGG GTGTA CCTG TTTTTGCATCAACAC YP_3667 4176510 - 4176019 - | putative lipoprotein TERM 4477 4176289 - 4176306 + g 79 -9.1 -4.18488 | opp_overlap 4176288 CCCCTGATACAAACC GGGGGGT GACC ACCCCTC TTTATTCAGCTCAAT YP_3668 4176868 - 4176503 - | hypothetical protein YP_3669 4177491 - 4176874 - | hypothetical protein YP_3670 4178587 - 4177484 - | hypothetical protein TERM 4478 4178525 - 4178485 - G 82 -6.9 -4.88795 | opp_overlap 4178494 ATTGAATAAAATAAA CCTCAGACAGCGTTAACTG CTG CAACTGACGCTGTGTAAAG TGCCGGCCAATAATC YP_3671 4180832 - 4178613 - | hypothetical protein vgrG5 4183193 - 4180845 - | hypothetical protein clpB2 4185900 - 4183297 - | putative Clp ATPase YP_3674 4186925 - 4185903 - | hypothetical protein TERM 4479 4186757 - 4186738 - GR 74 -9.3 -3.39784 | overlap 4186736 GCAGGCTGAATAATA CGTAGCC GCAGAT GGCTACG ATCACGTTGGGTGCC YP_3675 4188723 - 4186879 - | hypothetical protein YP_3676 4189199 - 4188756 - | hypothetical protein YP_3677 4189791 - 4189273 - | hypothetical protein TERM 4480 4189841 - 4189857 + r 76 -10.9 -2.72991 | GTTAAATCAGTATTC GGCAACT CAA AGTTGCC TCATTAAAAATGTAC TERM 4481 4189931 - 4189956 + r 73 -5.5 -4.74598 | gap 1, opp_overlap 4189934 4189938 ATATTCCCCCTCTAA TAAGCG-AGTGA TAT TCACAGCGCTTA TTTCTTTTCGCTTTC YP_3678 4191465 - 4189954 - | hypothetical protein TERM 4482 4190689 - 4190675 - G 70 -4.3 -4.67038 | opp_overlap 4190675, overlap 4190670 TCTTCAAAAGCAAAA TCATC AATAG GATGA TTTTTGGCACCATAC TERM 4483 4191333 - 4191319 - G 70 -11.4 -2.52015 | overlap 4191318 GGCATACGCAGCAAG CGTGCC TAT GGCACG GCGCACTGTGGCGGA YP_3679 4192025 - 4191465 - | hypothetical protein YP_3680 4193049 - 4192036 - | hypothetical protein YP_3681 4193379 - 4194122 + | hypothetical protein TERM 4484 4194278 - 4194252 - f 100 -15.4 -3.16881 | opp_overlap 4194254 CACGTATCTGACGAA TAGTGTCCATTA TCT TAATGGACACTA TTACCCCAAATATAT TERM 4485 4194254 - 4194276 + F 100 -13.6 -3.02263 | opp_overlap 4194252 CGTATCTGACGAATA GTGTCCATTA TCT TAATGGACAC TATTACCCCAAATAT rluA3 4195345 - 4195965 + | ribosomal large subunit pseudouridine synthase A djlA 4197096 - 4196263 - | DNA-J like membrane chaperone protein imp 4197281 - 4199623 + | organic solvent tolerance protein surA 4199691 - 4200995 + | peptidyl-prolyl cis-trans isomerase SurA TERM 4486 4201054 - 4201084 + GF 95 -14.1 -2.62396 | GATTTAGCCATCACT CTGGCTCAACAGG ATTGG CCTGTTGAGCTGG TAGTCTGCGCGGATC pdxA 4200967 - 4201974 + | 4-hydroxythreonine-4-phosphate dehydrogenase ksgA 4201967 - 4202785 + | dimethyladenosine transferase apaG 4202799 - 4203176 + | ApaG apaH 4203193 - 4204062 + | diadenosine tetraphosphatase TERM 4487 4204100 - 4204129 + T 77 -10.9 -2.78706 | opp_overlap 4204105, overlap 4204105 TTGTAAAGACGCTAA TTAAAGACGCATG AGCT TATGCGTCTTTAG ATTTCACCTATAATT TERM 4488 4204124 - 4204105 - T 74 -7.9 -3.93026 | opp_overlap 4204100 4204105 AAGACGCTAATTAAA GACGCAT GAGCTT ATGCGTC TTTAGATTTCACCTA TERM 4489 4204105 - 4204124 + T 75 -8.6 -3.85165 | opp_overlap 4204105, overlap 4204100 AAGACGCTAATTAAA GACGCATG AGCT TATGCGTC TTTAGATTTCACCTA YP_3690 4204616 - 4204152 - | hypothetical protein YP_3691 4204964 - 4204743 - | hypothetical protein TERM 4490 4205397 - 4205423 + G 86 -15.3 -2.91094 | opp_overlap 4205397, overlap 4205393 4205392 4205399 TTTTTCTAAATGAAA CAGGCCCATTA TTACC TAATGGGCCTG TATGCTAATTGTTTT TERM 4491 4205423 - 4205397 - g 100 -15.3 -4.05788 | opp_overlap 4205397 4205393 4205392 4205399 TTTTTCTAAATGAAA CAGGCCCATTA TTACC TAATGGGCCTG TATGCTAATTGTTTT TERM 4492 4205399 - 4205421 + G 76 -12.1 -2.9913 | opp_overlap 4205397, overlap 4205397 4205393 4205392 TTTCTAAATGAAACA GGCCCATTA TTACC TAATGGGCC TGTATGCTAATTGTT YP_3692 4205231 - 4205431 + | hypothetical protein folA 4205940 - 4205458 - | dihydrofolate reductase TERM 4493 4205868 - 4205817 - G 77 -11 -3.37796 | TCTTACGACCCATAA TTACCGGTTTATTTAACGTGTTAC GTTT GAACCACGCTAAATCAGCCGGTAA ATGCCATGGCATAGC YP_3694 4206551 - 4206090 - | hypothetical protein YP_3695 4207342 - 4206542 - | hypothetical protein TERM 4494 4207484 - 4207469 - H 70 -2.6 -4.93296 | CCATCAGGATAAAAA TCATTA ATTT CAATGA ACTGAATCACATCGG rhtB3 4207603 - 4208280 + | putative threonine efflux protein TERM 4495 4208455 - 4208482 + T 79 -8.4 -4.07885 | opp_overlap 4208459, overlap 4208459 TAAGCTACGAACGTA AAAAGGGCGATG TTGC CATCGCCCTTGA TTTTCGCCACGGATG TERM 4496 4208478 - 4208459 - T 100 -13.6 -4.7629 | opp_overlap 4208455 4208459 CTACGAACGTAAAAA GGGCGATG TTGC CATCGCCC TTGATTTTCGCCACG TERM 4497 4208459 - 4208478 + T 100 -13.6 -3.66908 | opp_overlap 4208459, overlap 4208455 CTACGAACGTAAAAA GGGCGATG TTGC CATCGCCC TTGATTTTCGCCACG carB 4211741 - 4208508 - | carbamoyl phosphate synthase large subunit TERM 4498 4210774 - 4210760 - G 70 -11.4 -2.52896 | CCAGTGTGTAACCGA CCGCCA GTT TGGCGG CAATCTTGGCAATCG TERM 4499 4210783 - 4210802 + g 74 -10 -3.53444 | TTGGCGGCAATCTTG GCAATCGG GAAA CCGGTTGC TTTAGAGGCCAGTGC TERM 4500 4211698 - 4211716 + g 74 -2.2 -5.07275 | opp_overlap 4211674 4211691 4211690, overlap 4211702 ATAACAATCGGGCCT GCGCCCAG AAT CAGGATGC TTTTTATATCTGTAC carA 4212959 - 4211757 - | carbamoyl phosphate synthase small subunit TERM 4501 4212192 - 4212213 + g 71 -10.9 -3.05596 | GATCGCGTAATCGCA TGGTTCTGG ATCC CCAGGACCA TTGGATAAGAAGATG TERM 4502 4213349 - 4213331 - R 85 -2.4 -5.80951 | opp_overlap 4213331 ATTTAAAATAAAAAA GGATAATA AAA TATTGCCC TATTATCAAATAATT TERM 4503 4213392 - 4213375 - R 82 -5.6 -4.94902 | opp_overlap 4213375 TAATTATGATAAAAA CAACCA CATCAC TGGTTG TAATTTAAAGCATTA dapB 4214226 - 4213405 - | dihydrodipicolinate reductase TERM 4504 4214601 - 4214577 - R 100 -9.9 -4.44046 | opp_overlap 4214580, overlap 4214579 4214580 CTTACCCCAAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCATATGCGCCTAT TERM 4505 4214599 - 4214579 - R 100 -12.5 -3.82628 | opp_overlap 4214580, overlap 4214577 4214580 TACCCCAAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 4506 4214580 - 4214598 + r 100 -16 -4.8048 | opp_overlap 4214579 4214577 4214580 ACCCCAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 4507 4214598 - 4214580 - R 100 -16 -2.88854 | opp_overlap 4214580, overlap 4214579 4214577 ACCCCAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC tnp_42 4215188 - 4214679 - | transposase for the IS1541 insertion element TERM 4508 4215250 - 4215268 + r 100 -16 -4.37092 | opp_overlap 4215250 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAT TERM 4509 4215268 - 4215250 - R 100 -16 -3.07307 | opp_overlap 4215250 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAT TERM 4510 4215307 - 4215290 - R 100 -8.4 -5.55769 | overlap 4215302 GGGCACAATAAAAAA GCAGCC ACAAAG GGCTGC TTCAGACTGCTGACA YP_3701 4215490 - 4215326 - | hypothetical protein TERM 4511 4215442 - 4215459 + g 70 -8.4 -3.767 | opp_overlap 4215437 TATCAATAACCTCAA GCAGCC GCAAAG GGCTGC TTTCGTCAGTAAATA ispH 4216472 - 4215519 - | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase slpA2 4216986 - 4216453 - | FKBP-type peptidyl-prolyl cis-trans isomerase lspA 4217488 - 4216979 - | lipoprotein signal peptidase TERM 4512 4217378 - 4217358 - G 76 -4.7 -5.03314 | overlap 4217359 GTTAGGTTGAAAAAA GGAATCAGT GGC ACCGATTCA TACAGAGCAAAGTGG ileS 4220304 - 4217488 - | isoleucyl-tRNA synthetase ribF 4221274 - 4220336 - | bifunctional riboflavin kinase/FMN adenylyltransferase TERM 4513 4220898 - 4220871 - G 88 -10.6 -4.15565 | gap 1 TGCAGTAGTTGAAAA TCC-CCCTGGCGC CCT GCGCCAAAGCGGA AGTCATCACCTACCG YP_3707 4221491 - 4221667 + | hypothetical protein TERM 4514 4221851 - 4221836 - g 76 -6.2 -4.62783 | GACGCAGCGCAAAAA GCATTT AATG AAATGC AACCAATCGTGGATC rpsT 4221689 - 4221952 + | 30S ribosomal protein S20 TERM 4515 4221974 - 4222003 + T 100 -14.5 -3.08344 | opp_overlap 4221980 4221982, overlap 4221982 GACATTGAGTGCTTG TAAAAAGACCGGC TTAG GCCGGTTTTTTTA TCTCTATCGTTTGGC TERM 4516 4221997 - 4221980 - T 76 -6.9 -4.57073 | opp_overlap 4221974 4221982, overlap 4221982 GAGTGCTTGTAAAAA GACCGGC TTAG GCCGGTT TTTTTATCTCTATCG TERM 4517 4221995 - 4221982 - T 81 -9.5 -3.90048 | opp_overlap 4221974 4221982, overlap 4221980 GTGCTTGTAAAAAGA CCGGC TTAG GCCGG TTTTTTTATCTCTAT TERM 4518 4221982 - 4221995 + T 100 -9.5 -5.77988 | opp_overlap 4221982 4221980, overlap 4221974 GTGCTTGTAAAAAGA CCGGC TTAG GCCGG TTTTTTTATCTCTAT nhaR 4222982 - 4222083 - | transcriptional activator NhaR TERM 4519 4223088 - 4223059 - R 100 -13.7 -3.2048 | TTTAAATTCCACCAA GCATTGCTGCC TGCGCTTG GGCAGCAATGC TGAATCAATAACGTG nhaA 4224296 - 4223112 - | sodium-proton antiporter TERM 4520 4224499 - 4224458 - R 74 -9.7 -3.12803 | opp_overlap 4224460 4224469, overlap 4224441 4224460 4224469 TATCCATATTCAACA GATAAAAAAAATCCTCGAT ATCA ACCGAGGATTTCTTTCATT TTACTTTATTAGCTG TERM 4521 4224497 - 4224460 - R 93 -12.3 -3.12142 | opp_overlap 4224460 4224469, overlap 4224441 4224458 4224469 TCCATATTCAACAGA TAAAAAAAATCCTCGAT ATCA ACCGAGGATTTCTTTCA TTTTACTTTATTAGC TERM 4522 4224460 - 4224497 + r 75 -5.7 -4.67942 | opp_overlap 4224441 4224460 4224458 4224469, overlap 4224469 TCCATATTCAACAGA TAAAAAAAATCCTCGAT ATCA ACCGAGGATTTCTTTCA TTTTACTTTATTAGC TERM 4523 4224488 - 4224469 - R 100 -8.6 -6.08563 | opp_overlap 4224460 4224469, overlap 4224460 4224458 AACAGATAAAAAAAA TCCTCGAT ATCA ACCGAGGA TTTCTTTCATTTTAC TERM 4524 4224469 - 4224488 + r 77 -6.4 -4.67692 | opp_overlap 4224469 4224460 4224458, overlap 4224460 AACAGATAAAAAAAA TCCTCGAT ATCA ACCGAGGA TTTCTTTCATTTTAC dnaJ2 4225678 - 4224539 - | chaperone protein DnaJ TERM 4525 4224589 - 4224602 + g 83 -3.1 -5.40072 | CATCTAAGAAACTTT TAGCT CGCG GGCTA TTTTTTTCACCAGCA TERM 4526 4225704 - 4225741 + r 100 -15.5 -3.53224 | opp_overlap 4225702, overlap 4225707 CCTACCCTTAACATG CGTGCACGGGCGTAGAG TTTC CTCGACGCCCGTGCTGG TTTCCAGCAACAGTA TERM 4527 4225707 - 4225738 + r 100 -20.2 -2.90496 | opp_overlap 4225702, overlap 4225704 ACCCTTAACATGCGT GCACGGGCGTAGAG TTTC CTCGACGCCCGTGC TGGTTTCCAGCAACA dnaK 4227700 - 4225790 - | chaperone protein DnaK TERM 4528 4227362 - 4227372 + g 74 -2.4 -5.12707 | overlap 4227343 4227342 4227369 TTCAGCAGAGATCTG CGGC GGT GCCA TTTTTTGGCCTTTAA TERM 4529 4228101 - 4228113 + G 75 -10.5 -3.39668 | overlap 4228102 AAGTTGGCGAATCCT GGCCC ATT GGGCC TTATGGGCTTTGGGA TERM 4530 4228148 - 4228162 + G 71 -7.1 -4.16842 | opp_overlap 4228148 TACCGTCTTGCTAAA CCTGC ACAAC GCAGG TTTCTTCCCACTGAG TERM 4531 4228268 - 4228254 - g 90 -5.7 -5.31275 | opp_overlap 4228265 TTGGAGTATAAAAAA GGCAA CACAT TTGCC GCCACCGCATTTACC YP_3713 4228074 - 4228664 + | hypothetical protein TERM 4532 4228717 - 4228755 + F 100 -20 -4.55798 | opp_overlap 4228717 AGCTTATATTACACA GCACCTTGAATATTAGAT AAA ATTTAATATTCAAGGTGC TTTTACTTTCCACTC TERM 4533 4228755 - 4228717 - f 100 -17.8 -2.97925 | opp_overlap 4228717 AGCTTATATTACACA GCACCTTGAATATTAGAT AAA ATTTAATATTCAAGGTGC TTTTACTTTCCACTC TERM 4534 4229266 - 4229239 - g 80 -2.1 -5.48163 | gap 1, opp_overlap 4229239 AAAGAAATTAAAAAA TGATGTCA-ACC TAGAC GGTATGAAATCA TTTGGACTATATAAT YP_3714 4228973 - 4231420 + | hypothetical protein TERM 4535 4231477 - 4231435 - T 78 -5.3 -5.04597 | gap 2, opp_overlap 4231442, overlap 4231437 4231442 AGGTATAGAGAAAAA GATAAAAGCCCATAATTTATT GAT AATAA-TTATGGGCTTTT-TA AAGTGAATTGACTTA TERM 4536 4231476 - 4231437 - T 91 -10.4 -4.14422 | gap 1, opp_overlap 4231442, overlap 4231435 4231442 GTATAGAGAAAAAGA TAAAAGCCCATAATTTATT GAT AATAA-TTATGGGCTTTTT AAAGTGAATTGACTT TERM 4537 4231442 - 4231471 + T 100 -10.3 -4.63184 | gap 1, opp_overlap 4231437 4231435 4231442 GAGAAAAAGATAAAA GCCCATAATTTATT GAT AATAA-TTATGGGC TTTTTAAAGTGAATT TERM 4538 4231471 - 4231442 - T 100 -10.3 -5.02287 | gap 1, opp_overlap 4231442, overlap 4231437 4231435 GAGAAAAAGATAAAA GCCCATAATTTATT GAT AATAA-TTATGGGC TTTTTAAAGTGAATT proP31 4232878 - 4231490 - | putative transport protein TERM 4539 4231683 - 4231672 - G 78 -5.8 -4.84363 | opp_overlap 4231671 TTAAACCACCAAAAA TGGC ATAG GCCA CATTGTACGAGAAAG TERM 4540 4231848 - 4231838 - G 74 -6.8 -4.37092 | ATTGGTGTGATAAAA CGAC CAT GTCG ACATCGCCAGCATCA mogA 4233593 - 4233006 - | molybdenum cofactor biosynthesis protein YP_3717 4233837 - 4233679 - | hypothetical protein TERM 4541 4233838 - 4233823 - G 100 -10.4 -5.45652 | opp_overlap 4233823 ATCGGCAATAAAAAA GGTGGC TTGC GCCACC TCATTCAGATACCGA talB 4234834 - 4233881 - | transaldolase B TERM 4542 4234172 - 4234189 + g 100 -7 -5.32882 | GCTTGCACCCATCAC CACGGT CTTATA ACCGTG TTTTTTGTAGTACTG YP_3719 4235083 - 4234901 - | hypothetical protein YP_3720 4235363 - 4236142 + | hypothetical protein TERM 4543 4237011 - 4236983 - T 74 -4.6 -4.74801 | CAATGCCATCAAAAA TGCCCGCA TTTGTGCAAAGTC TGCGGGCA AATCATGGGATAGCA thrC 4238248 - 4236959 - | threonine synthase TERM 4544 4238082 - 4238067 - G 73 -5.4 -4.73613 | gap 1 TCACTACCAATAAAA GCCGACA GAA TG-CGGC TACTACGGGTCACAA thrB 4239181 - 4238252 - | homoserine kinase TERM 4545 4238901 - 4238880 - G 71 -10.9 -3.13164 | gap 1 CCGGCAACCACTGAA CAGGCGCTGG AAC CCAGC-CCTG AACCGATCGGCATAT thrA 4241637 - 4239184 - | bifunctional aspartokinase I/homeserine dehydrogenase I TERM 4546 4241736 - 4241714 - H 100 -12 -6.11644 | opp_overlap 4241714 TGATTGAAAAAAAAA GCCCGCAC TGTCTAG GTGCGGGC TTTTTTCTGTTGTTT TERM 4547 4241714 - 4241736 + H 100 -12.7 -5.57729 | opp_overlap 4241714 TGATTGAAAAAAAAA GCCCGCACT GTCTA GGTGCGGGC TTTTTTCTGTTGTTT YP_3724 4242475 - 4242648 + | hypothetical protein arcA 4242747 - 4243463 + | two-component response regulator TERM 4548 4243510 - 4243487 - T 70 -7.4 -3.76607 | opp_overlap 4243489, overlap 4243489 GAATAGAGACGGAAA GAGCCAGCAC ACAG ATGCTGGCTT TTTTGTTTTTATATC TERM 4549 4243489 - 4243508 + T 100 -9.3 -5.98675 | opp_overlap 4243489 4243487 ATAGAGACGGAAAGA GCCAGCA CACAGA TGCTGGC TTTTTTGTTTTTATA TERM 4550 4243508 - 4243489 - T 78 -10 -3.45632 | opp_overlap 4243489, overlap 4243487 ATAGAGACGGAAAGA GCCAGCAC ACAG ATGCTGGC TTTTTTGTTTTTATA creA 4244104 - 4243637 - | hypothetical protein rob 4244330 - 4245196 + | right origin-binding protein gpmB 4245840 - 4245193 - | phosphoglycerate mutase TERM 4551 4245909 - 4245879 - H 71 -4.8 -4.65512 | opp_overlap 4245879 4245878, overlap 4245874 AAAATAAGCACAAAA CCTATCTGAGATAA AAC CTATTTTAGATAGG CTTTAAAGGATATTC YP_3729 4245934 - 4246476 + | NTPase trpR 4246874 - 4246473 - | Trp operon repressor slt 4249039 - 4247120 - | lytic murein transglycosylase TERM 4552 4249749 - 4249732 - g 70 -3.3 -4.7629 | overlap 4249734 4249743 GGATTAAGCCAAAAA GAGGCAC AAGA GCGCCTG GCGCAATATGGTCCC mgtA 4249609 - 4252335 + | putative cation-transporting P-type ATPase TERM 4553 4252356 - 4252386 + F 100 -15.4 -4.14739 | opp_overlap 4252356, overlap 4252381 GTCAGAAGAGAAAAA GCCCCGGAGCAG TCCAGCC CAGCTCCGGGGC TTTTGAGGTAAATAA TERM 4554 4252386 - 4252356 - f 100 -15.4 -5.1523 | opp_overlap 4252356 4252381 GTCAGAAGAGAAAAA GCCCCGGAGCAG TCCAGCC CAGCTCCGGGGC TTTTGAGGTAAATAA TERM 4555 4252526 - 4252542 + F 84 -2.9 -5.59879 | opp_overlap 4252526 ACTACCTGACAAAAA CCCGG AAAACAG TCGGG TTTTTTATATTTCTA TERM 4556 4252593 - 4252573 - f 72 -6.3 -4.34263 | overlap 4252569 4252567 4252578 4252585 TTTCAATAACATAAA TAAGATTTA AGA TAAATCTCA AATTTACGATGATAT YP_3733 4252710 - 4253333 + | hypothetical protein TERM 4557 4253551 - 4253564 + G 70 -3.1 -4.77036 | gap 1 CATCAGTTATACCAC CGA-GG CCG CCGTCG TTTTTGGTGATAACG TERM 4558 4253688 - 4253656 - g 78 -10 -3.90766 | CATTGATAAACATAA TCGTCAGATAGC TTACTGGGC GCTACCTGACGA TGGGCCTATCCATCA YP_3734 4253354 - 4254631 + | hypothetical protein ompA5 4254637 - 4255143 + | putative lipoprotein TERM 4559 4255157 - 4255178 + F 90 -10.9 -4.05926 | AACGTCCTTTATTTA CCGGTTTGC GGCT GTAAACCGG TTTCTGCCTTTATTC TERM 4560 4256095 - 4256081 - g 89 -2.1 -5.7946 | gap 1 GCTGGAACAAAAAAA TGC-CC GTCT GGCGCA AGAAGCCTCTTCTGA uup4 4255326 - 4256993 + | putative ABC transporter ATP-binding protein TERM 4561 4257141 - 4257112 - T 70 -9.3 -2.88861 | opp_overlap 4257118, overlap 4257117 4257118 TAGTAGCCTGACAGA TAGAAGGGCCTGC AATC GCAGGCCTTTTTA GTCAGGGTATTTCGC TERM 4562 4257136 - 4257117 - T 78 -9.2 -3.64198 | opp_overlap 4257118, overlap 4257112 4257118 GCCTGACAGATAGAA GGGCCTGC AATC GCAGGCCT TTTTAGTCAGGGTAT TERM 4563 4257118 - 4257135 + T 100 -12.7 -4.72986 | opp_overlap 4257117 4257112 4257118 CCTGACAGATAGAAG GGCCTGC AATC GCAGGCC TTTTTAGTCAGGGTA TERM 4564 4257135 - 4257118 - T 89 -12.7 -2.78197 | opp_overlap 4257118, overlap 4257117 4257112 CCTGACAGATAGAAG GGCCTGC AATC GCAGGCC TTTTTAGTCAGGGTA YP_3737 4258308 - 4257139 - | hypothetical protein TERM 4565 4258291 - 4258319 + g 70 -8.2 -3.72695 | overlap 4258294 4258304 CTCCCAACCGGAGAG TGAGCCGATTAG CCTCA TTATTCGGCTCA TTTGGTGAGCCGAAT TERM 4566 4258325 - 4258353 + r 83 -11.9 -2.84634 | overlap 4258304 4258294 ATTCGGCTCATTTGG TGAGCCGAATA GCCAGTA TATTCGGCTCA TGTGATGATATCCAG nadR 4259697 - 4258426 - | nicotinamide-nucleotide adenylyltransferase TERM 4567 4259639 - 4259655 + g 73 -2.9 -4.93547 | overlap 4259640 CTGGCCTCAGCCACC TGCTGTA AGG TGCAGCC TTTTTGCTTAATTGC TERM 4568 4259746 - 4259733 - R 71 -4.5 -4.74052 | ACTAAACAAAAATAA CACAG TATG CTGCG GGATTGGCACTATTA radA 4261238 - 4259856 - | DNA repair protein RadA TERM 4569 4260449 - 4260462 + g 76 -5.2 -4.87665 | CACCCAGTTCGTTAA CCGC ACCAAA GCGG TTTTTGTGGCTACGC serB 4262306 - 4261326 - | phosphoserine phosphatase TERM 4570 4262498 - 4262480 - H 73 -8.8 -3.51597 | overlap 4262481 AAGGGTGAATCAGAA CCGCTGCG TCA CGCAGCAA CATCAAGTATGCAGG TERM 4571 4262497 - 4262481 - H 71 -10.1 -2.70476 | overlap 4262480 AGGGTGAATCAGAAC CGCTGCG TCA CGCAGCA ACATCAAGTATGCAG smp 4262538 - 4263239 + | hypothetical protein TERM 4572 4263313 - 4263278 - T 79 -7.6 -4.31293 | overlap 4263282 TCAGAGAGGAATAAA TCAATTCAGCGGCAGA GATC TCTACCGCTGAAGAAA GAAAAAACCGCTGGA TERM 4573 4263309 - 4263282 - T 100 -15 -3.71527 | overlap 4263278 AGAGGAATAAATCAA TTCAGCGGCAGA GATC TCTACCGCTGAA GAAAGAAAAAACCGC deoD 4264076 - 4263351 - | purine nucleoside phosphorylase deoB 4265484 - 4264195 - | phosphopentomutase deoA 4266872 - 4265550 - | thymidine phosphorylase deoC2 4267805 - 4266993 - | deoxyribose-phosphate aldolase TERM 4574 4268170 - 4268185 + r 76 -7.6 -4.21439 | ATTTGAGCACGTTAG CACATC ATGA GATGTG TTTATCTTCACATTA TERM 4575 4268283 - 4268309 + r 79 -11 -3.15544 | opp_overlap 4268305 TCTATTGGCCCCGAT TACGCTATTCGT ATC AAGAATAGCGTA TTGGTGAGAATACGC TERM 4576 4268335 - 4268357 + r 83 -12.1 -2.61383 | opp_overlap 4268334, overlap 4268334 TACGCCTGATAGCAT GTGCCGTTT GACAA AAACGGCAC CTTATACATCACAGT nupC2 4269673 - 4268366 - | putative Na+ dependent nucleosidetransporter-family protein TERM 4577 4269888 - 4269914 + r 72 -10.1 -2.88849 | gap 1, opp_overlap 4269877, overlap 4269883 4269889 ACATCCATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCTCTGCC TERM 4578 4269889 - 4269915 + r 84 -10.1 -3.82218 | gap 1, opp_overlap 4269877, overlap 4269883 4269888 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCTCTGCCT tatD4 4270984 - 4270172 - | putative metalloenzyme rssA2 4272268 - 4270997 - | alpha-beta hydrolase family esterase YP_3749 4272503 - 4272342 - | hypothetical protein TERM 4579 4272552 - 4272531 - R 72 -8 -3.82946 | opp_overlap 4272530 4272531 CCAGTTTAAAGATAA GGTGCCTG ATTAAA CAGACACC CTTTCATTTGGCTCT osmY2 4273284 - 4272670 - | periplasmic protein prfC 4275200 - 4273611 - | peptide chain release factor 3 TERM 4580 4274747 - 4274771 + g 79 -9.3 -4.2461 | CATCCAGAACTTCCA TTGGATCACGA ATT TCGCGGTCCAA TTTGTTCATAAAGGT TERM 4581 4274982 - 4275008 + g 82 -6.6 -4.81851 | opp_overlap 4274973, overlap 4274967 4274966 CGGAAACTGCATTAC CGACGTGGTA ATGGAGA TACCGCGTTG TTTTTCCATTTCCAT TERM 4582 4275398 - 4275374 - R 84 -3.6 -5.43329 | gap 2, opp_overlap 4275394, overlap 4275375 AAAAACAAAATAAAA CGGCGCTATGCC ATT GGCA-A-CGCCA TCATAATGGCATCTT rimI 4275822 - 4275379 - | ribosomal-protein-alanine N-acetyltransferase TERM 4583 4275707 - 4275731 + gr 80 -4.2 -5.09895 | TTAAAATTGAGGTAC CGGTCGCC CTGATTACT GGCGAACG TTTTTTCCGTCCATG holD 4276204 - 4275767 - | DNA polymerase III subunit psi TERM 4584 4275891 - 4275874 - GH 75 -8.4 -3.87815 | opp_overlap 4275867 4275874 CCGCATCTTGATAAA GCCCAG CTAATT CTGGGC TATGTAATTGTGCAC TERM 4585 4276423 - 4276409 - g 70 -10 -3.24924 | opp_overlap 4276408 4276409, overlap 4276407 CGGTGATTTACAAGA TGCGCT GCC AGCGCA ATTTGATGCAGCCGG TERM 4586 4277236 - 4277264 + G 77 -9.5 -3.72576 | TAGCGAACTCCTTCC TGCCGTATCCTGC CTT GCTGGATGCCGCA TTTGGTAGCCACGAA rsmC 4276317 - 4277360 + | 16S ribosomal RNA m2G1207 methyltransferase proP32 4278205 - 4277873 - | major facilitator superfamily permease TERM 4587 4277965 - 4277951 - G 83 -5.6 -5.1356 | TGGCAGTAACAAAAA GTGCCG CAA CCGCAC GTGGTACAACATGCT hmsT 4278454 - 4279626 + | HmsT protein YP_3757 4281252 - 4280167 - | putative pectinesterase YP_3758 4281561 - 4281908 + | hypothetical protein YP_3759 4282055 - 4282387 + | hypothetical protein TERM 4588 4282708 - 4282685 - T 100 -11 -5.75342 | GTTCGTCAAAAAAAA CAGCCCCG TGACTGAC CGGGGCTG CTGAAATTACTTTTA mexB 4285834 - 4282748 - | putative multi-drug efflux protein TERM 4589 4284024 - 4284014 - G 74 -8.2 -3.9712 | GTAGGTCAGCATAAA GCGC ATT GCGC CCTGACCTATGGTTG TERM 4590 4284300 - 4284316 + g 70 -8.7 -3.56099 | opp_overlap 4284300 4284299 4284290, overlap 4284290 4284303 TAATAGCGGAATAAC CAGCCGT CAT ACGGTTG TTTAACCGGCTTATC TERM 4591 4284337 - 4284349 + g 79 -5.5 -4.93365 | CCGGCTTATCCGCAT CAGCT TCA GGCTG TTTTTGGTTCTGGAA acrA10 4286916 - 4285834 - | putative lipoprotein YP_3762 4287201 - 4286968 - | hypothetical protein YP_3763 4287425 - 4287228 - | hypothetical protein TERM 4592 4287801 - 4287781 - R 100 -14 -3.67976 | GCCATTAACGTTAAA CGGCACCC ATAAA GGGTGCCG CGGCTAAACAAAAAA TERM 4593 4287902 - 4287928 + r 70 -7.2 -3.74872 | gap 1, opp_overlap 4287890, overlap 4287901 TATCCATGTAGGCTC GAG-CCGCGCC CTCCCT GGCGCGGACGC TTTACTCCCCTGCCT rfaL 4289243 - 4288011 - | putative O-antigen biosynthesis protein TERM 4594 4288410 - 4288399 - G 73 -5.8 -4.5442 | GCTTCAACCACAAAA GCAG AACG CTGC CCCATGGAGGAATTA TERM 4595 4289141 - 4289123 - G 70 -4.6 -4.59414 | TGATAATAATCAAAA CCAATGAA ACA CTCATTAG CTGATTATTCGTTGG rfaQ 4290466 - 4289291 - | putative lipopolysaccharide core biosynthesis protein TERM 4596 4290051 - 4290039 - G 71 -6.9 -4.15044 | GTGGGTTTTAACAAA CGGCA ATA CGCCG CAGCCCGCCATTGAT TERM 4597 4290107 - 4290143 + g 70 -8 -3.79747 | overlap 4290108 ATGTTGTTTTTTTAG GGCGCTAAACAGTG CTTTTTCGC CACTGATTTGCGCC TTTAATCCTGCATGC TERM 4598 4290682 - 4290716 + r 100 -10.7 -4.29928 | gap 1, opp_overlap 4290657 ACGCAGCACGTGACG GCGGCGAGCATTGCCC CGAA GCGCAA-GCTGGCCGC TTTTCGCTATTAATT xylB3 4292431 - 4290800 - | autoinducer-2 (AI-2) kinase deoR4 4293483 - 4292563 - | putative regulatory protein TERM 4599 4293460 - 4293448 - GH 70 -3.3 -4.77567 | overlap 4293449 ATCGTGATAATAAAA CCACG CAA CGCGA GCGAGCAGTTCCTCT YP_3768 4293482 - 4293793 + | hypothetical protein TERM 4600 4294923 - 4294906 - g 79 -9.1 -4.26076 | opp_overlap 4294915, overlap 4294894 TCACGGCGATGAAAA CCGCCAA TCGC CTGGCGG CGGGCTTAGTGTATT mglA9 4293834 - 4295486 + | putative ABC transporter ATP-binding protein araH14 4295480 - 4296535 + | putative ABC transporter permease protein araH15 4296532 - 4297533 + | putative ABC transporter permease protein rbsB12 4297585 - 4298604 + | putative periplasmic solute-binding protein TERM 4601 4298771 - 4298786 + G 71 -5.4 -4.56597 | gap 1, opp_overlap 4298771, overlap 4298773 GATTGGGGAATGCAA TCC-CGC CTG GCGCGGA TTTTTAACCCGAAAA TERM 4602 4299063 - 4299083 + G 78 -12.5 -3.0094 | CTGTACGGCTCAATG CCTGCGCGG TCG CCGCACAGG TGTATATCGGTACGG fbaB 4298660 - 4299535 + | aldolase YP_3774 4299599 - 4299889 + | autoinducer-2 (AI-2) modifying protein LsrG YP_3775 4300190 - 4300681 + | hypothetical protein ptsA 4303400 - 4300743 - | putative phosphoenolpyruvate-protein phosphotransferase TERM 4603 4301050 - 4301036 - G 76 -4.2 -5.05782 | ATCCAGTGGAAAAAA GGGC TTCTCGC GCCC ACACATCCGCAGCCA TERM 4604 4303470 - 4303483 + H 78 -5.3 -4.91511 | TCATTGCCGGGAAGT TGAGA TGGC TCTCA TTTTTCTGATGACAT frwC 4303663 - 4304748 + | putative fructose-like permease EIIC subunit 2 TERM 4605 4304966 - 4304987 + F 95 -13.1 -3.15544 | overlap 4304983 TGCTAGCCCGCAGGG TGAGCCTCA AGGA TGAGGCTCA TTAGTCCCGATGAGC frwB 4305089 - 4305409 + | putative fructose-like phosphotransferase EIIB subunit 2 frwD 4305439 - 4305846 + | putative fructose-like phosphotransferase EIIB subunit 3 araC7 4306714 - 4305839 - | putative transcriptional regulator TERM 4606 4306667 - 4306686 + g 77 -13.6 -2.55544 | opp_overlap 4306665 4306662, overlap 4306662 ATGGTGAATACTATT CGGCTCTG ATAC CAGAGCCG TCAGTTGACTGATAA YP_3781 4307252 - 4306716 - | hypothetical protein YP_3782 4307958 - 4309154 + | hypothetical protein htpX4 4309165 - 4310211 + | M48 peptidase family protein YP_3784 4311511 - 4310357 - | hypothetical protein sbcC3 4312896 - 4311508 - | hypothetical protein YP_3786 4312961 - 4313158 + | hypothetical protein TERM 4607 4313189 - 4313171 - f 70 -8 -3.64487 | TGACACTGGTAAGAA CCACCCGC ACG GCGGAAGG AACTGCCCACGCAGG TERM 4608 4313268 - 4313278 + F 71 -6.8 -4.12188 | opp_overlap 4313267, overlap 4313252 CCGCCGGAAAACAGG CGAG ATT CTCG TTTTCAGAGTAGTAA YP_3787 4313360 - 4313647 + | hypothetical protein YP_3788 4315364 - 4313991 - | hypothetical protein mutL2 4316058 - 4315336 - | hypothetical protein TERM 4609 4315880 - 4315895 + gr 74 -7.6 -4.04188 | opp_overlap 4315877 TCTACCGACATACCG TTTCCG TAAT CGGAAA TTATTATCTTTAACT YP_3790 4317439 - 4316108 - | modification methylase TERM 4610 4316149 - 4316159 + g 73 -5.4 -4.73388 | overlap 4316145 CTTTATCCATCGTAT TAGC AAT GCTA TTTTTCATCGCCATT TERM 4611 4317331 - 4317342 + g 70 -4.4 -4.7254 | ATTGAATCAAAGCAT GACA GTAT TGTC TTTTTGCTCGCCCCT galU2 4317919 - 4317452 - | UDP-glucose pyrophosphorylase YP_3792 4318396 - 4318166 - | hypothetical protein TERM 4612 4318250 - 4318235 - G 100 -6.8 -5.81412 | opp_overlap 4318235 TTTAGGCAAAAAAAA GCCACC TTGC GGTGAC TTAATTTTCATACTA YP_3793 4319779 - 4318463 - | hypothetical protein mcrB 4321839 - 4319776 - | hypothetical protein TERM 4613 4319970 - 4319981 + g 79 -7.2 -4.58466 | ACACGAACTGTAGCT GCGG GTTT CCGC TTTTCTGATTGTCGC TERM 4614 4321759 - 4321772 + g 70 -9.5 -3.25762 | overlap 4321757 CTGACGATAGTGTTT GCCCC AGTC GGGGC TGTATTGATTATTTT TERM 4615 4321951 - 4321969 + H 100 -13.2 -4.01078 | CCAGGGGGTAATCTG CTCTCCTG ATT CAGGAGAG TTTATGGTCACTTTT YP_3795 4321973 - 4322995 + | transposase for insertion sequence IS100 TERM 4616 4323076 - 4323062 - g 77 -11.4 -3.3506 | overlap 4323053 TGGAAAGCCTTATAA GCGCAG CGC CTGCGC TGTCACAACAGGCAG dnaC_29 4322992 - 4323774 + | transposase/IS protein TERM 4617 4324796 - 4324771 - T 75 -8.9 -3.6284 | AATTAGCACGCTAAA CGCCCTTTTCC CCAA GGCCAAGGGCG TAGCAAGCGAACGTT lysR21 4325749 - 4324856 - | LysR family transcriptional regulator YP_3799 4326011 - 4326715 + | hypothetical protein TERM 4618 4326795 - 4326770 - Tf 100 -11.9 -4.09685 | opp_overlap 4326775 4326776, overlap 4326776 CCCTATCGTGTAAAA CAAAAACCCGC CAAA GCGGGATTTTG TGGCATGAGTGGCGT TERM 4619 4326775 - 4326790 + TF 70 -6 -4.40358 | opp_overlap 4326770 4326776, overlap 4326776 TCGTGTAAAACAAAA ACCCGC CAAA GCGGGA TTTTGTGGCATGAGT TERM 4620 4326789 - 4326776 - Tf 100 -9.5 -5.45802 | opp_overlap 4326775 4326776, overlap 4326770 CGTGTAAAACAAAAA CCCGC CAAA GCGGG ATTTTGTGGCATGAG TERM 4621 4326776 - 4326789 + TF 72 -9.5 -3.23733 | opp_overlap 4326776 4326770, overlap 4326775 CGTGTAAAACAAAAA CCCGC CAAA GCGGG ATTTTGTGGCATGAG TERM 4622 4326908 - 4326883 - Tf 83 -11.9 -2.73124 | opp_overlap 4326888 4326889, overlap 4326889 CCCTATCCTGCAAAG CAAAAACCCGC CGAA GCGGGATTTTG TGGCATGAGTGGCGT TERM 4623 4326888 - 4326903 + TF 70 -6 -4.40358 | opp_overlap 4326883 4326889, overlap 4326889 TCCTGCAAAGCAAAA ACCCGC CGAA GCGGGA TTTTGTGGCATGAGT TERM 4624 4326902 - 4326889 - Tf 100 -9.5 -4.98531 | opp_overlap 4326888 4326889, overlap 4326883 CCTGCAAAGCAAAAA CCCGC CGAA GCGGG ATTTTGTGGCATGAG TERM 4625 4326889 - 4326902 + TF 72 -9.5 -3.23733 | opp_overlap 4326889 4326883, overlap 4326888 CCTGCAAAGCAAAAA CCCGC CGAA GCGGG ATTTTGTGGCATGAG TERM 4626 4327021 - 4326996 - Tf 83 -11.9 -2.73124 | opp_overlap 4327001 4327002, overlap 4327002 CCCTATCCTGCAAAG CAAAAACCCGC CGAA GCGGGATTTTG TGGAATGAGTGGCGT TERM 4627 4327001 - 4327016 + TF 70 -6 -4.40358 | opp_overlap 4326996 4327002, overlap 4327002 TCCTGCAAAGCAAAA ACCCGC CGAA GCGGGA TTTTGTGGAATGAGT TERM 4628 4327015 - 4327002 - Tf 100 -9.5 -4.98531 | opp_overlap 4327001 4327002, overlap 4326996 CCTGCAAAGCAAAAA CCCGC CGAA GCGGG ATTTTGTGGAATGAG TERM 4629 4327002 - 4327015 + TF 72 -9.5 -3.23733 | opp_overlap 4327002 4326996, overlap 4327001 CCTGCAAAGCAAAAA CCCGC CGAA GCGGG ATTTTGTGGAATGAG TERM 4630 4327134 - 4327109 - Tf 83 -11.9 -2.73124 | opp_overlap 4327114 4327115, overlap 4327115 CCCTATCCTCCAAAG CAAAAACCCGC CGAA GCGGGATTTTG TGGAATGAGTGGCGT TERM 4631 4327114 - 4327129 + TF 70 -6 -4.40358 | opp_overlap 4327109 4327115, overlap 4327115 TCCTCCAAAGCAAAA ACCCGC CGAA GCGGGA TTTTGTGGAATGAGT TERM 4632 4327128 - 4327115 - Tf 100 -9.5 -4.98531 | opp_overlap 4327114 4327115, overlap 4327109 CCTCCAAAGCAAAAA CCCGC CGAA GCGGG ATTTTGTGGAATGAG TERM 4633 4327115 - 4327128 + TF 72 -9.5 -3.23733 | opp_overlap 4327115 4327109, overlap 4327114 CCTCCAAAGCAAAAA CCCGC CGAA GCGGG ATTTTGTGGAATGAG TERM 4634 4327247 - 4327222 - Tf 83 -11.9 -2.73124 | opp_overlap 4327227 4327228, overlap 4327228 CCCTATCCTCCAAAG CAAAAACCCGC CGAA GCGGGATTTTG TGGAATGAGTGGAGT TERM 4635 4327227 - 4327242 + TF 70 -6 -4.40358 | opp_overlap 4327222 4327228, overlap 4327228 TCCTCCAAAGCAAAA ACCCGC CGAA GCGGGA TTTTGTGGAATGAGT TERM 4636 4327241 - 4327228 - Tf 100 -9.5 -4.98531 | opp_overlap 4327227 4327228, overlap 4327222 CCTCCAAAGCAAAAA CCCGC CGAA GCGGG ATTTTGTGGAATGAG TERM 4637 4327228 - 4327241 + TF 72 -9.5 -3.23733 | opp_overlap 4327228 4327222, overlap 4327227 CCTCCAAAGCAAAAA CCCGC CGAA GCGGG ATTTTGTGGAATGAG YP_3801 4328551 - 4327652 - | putative tetrapyrrole methylase TERM 4638 4327747 - 4327764 + gF 82 -10.5 -3.60762 | overlap 4327749 TGACTCCATGAATTT CTGCCGC TAAT GCGGCGG CTTTTTTCAGCGGTA TERM 4639 4327749 - 4327765 + gF 89 -7.2 -5.02074 | overlap 4327747 ACTCCATGAATTTCT GCCGCT AATGC GGCGGC TTTTTTCAGCGGTAA TERM 4640 4328616 - 4328598 - gH 80 -2.5 -5.42259 | gap 1, opp_overlap 4328598, overlap 4328601 GCATCTTGAAAAAAA CATCACTG GATA CAGT-ATG CTTTCCTCAACGTTC TERM 4641 4328967 - 4328957 - gH 77 -8.2 -4.03995 | opp_overlap 4328959 4328960, overlap 4328958 TCGCGCAGAAAAATA CGCC AGC GGCG GCTGATATTCTTGCC lppC 4328518 - 4330587 + | hypothetical protein TERM 4642 4330751 - 4330785 + G 78 -10 -3.82824 | TCTCGTTTTTCAAGC GGCCAATGTTGCCTTC CGT GGAGGCGAAATTGACC TTATTATGCGTGATG TERM 4643 4330899 - 4330936 + G 71 -7.9 -4.07885 | gap 3, opp_overlap 4330890 4330887 4330891, overlap 4330887 CAACAACGGCTACAT CTGGCCGCCGCTGTT-TG GCTGG CACAAC-GCGGC-GCCAG TTTTGCCACAACATC YP_3803 4330671 - 4331024 + | hypothetical protein TERM 4644 4331113 - 4331099 - f 77 -5 -5.00642 | opp_overlap 4331099 CAAGCGAGAGAAAAA TTGGTC TGG AACCAA TTTGAACAGCATTTA gmhA 4331295 - 4331885 + | DnaA initiator-associating protein DiaA TERM 4645 4332038 - 4331996 - g 85 -7.6 -4.82901 | CGGTTGCCACAAAAA CCGCCACGGATCCACGTACC ATC GGTACGCAGGTAGATGACGG CACACTGGAAGCCAG osmY3 4331896 - 4332471 + | hypothetical protein TERM 4646 4332544 - 4332499 - T 71 -6.8 -4.11363 | opp_overlap 4332508, overlap 4332492 AAGAAGATTAAATAA GATTTATCACGGGCTTAGCG CTAAAC CGCCAAGCCCGTTTTTTATC CACCACATCGATACC TERM 4647 4332508 - 4332535 + T 100 -12.7 -5.24129 | opp_overlap 4332499 AAATAAGATTTATCA CGGGCTTAGCG CTAAAC CGCCAAGCCCG TTTTTTATCCACCAC mtgA 4333403 - 4332678 - | monofunctional biosynthetic peptidoglycan transglycosylase elbB 4334053 - 4333400 - | isoprenoid biosynthesis protein YP_3808 4334277 - 4334083 - | hypothetical protein TERM 4648 4334274 - 4334297 + g 100 -4.4 -5.81032 | overlap 4334277 TGGCGCAGTCTTCGC GCACCCCGGC CTCG GTCGGGGTTA TTTTTTTTCAACTTC TERM 4649 4334277 - 4334294 + g 100 -10.5 -4.96028 | overlap 4334274 CGCAGTCTTCGCGCA CCCCGGC CTCG GTCGGGG TTATTTTTTTTCAAC arcB 4336631 - 4334295 - | aerobic respiration control sensor protein ArcB YP_3810 4337884 - 4336895 - | hypothetical protein TERM 4650 4337202 - 4337212 + g 79 -6.8 -4.60924 | opp_overlap 4337197 ATCCCATCAACACCG GTGG TGA CCAC TTTTTCCAAGGTTTC TERM 4651 4339387 - 4339365 - g 70 -9.8 -3.33419 | overlap 4339351 4339363 4339359 ACGGCGAAATCAACA CCATCGCCGG TAA CCGCCAATGG GCCAAGGCGCGTGCC gltB 4338641 - 4343098 + | glutamate synthase subunit alpha TERM 4652 4343260 - 4343225 - g 78 -9.6 -3.89695 | opp_overlap 4343236 4343238 TTCTCAGAAACACAA GCCAAAGCACAGGCCG ATCG CTGCCTGTCCTGCGGC AATCCGTACTGTGAA TERM 4653 4343566 - 4343587 + G 84 -15.1 -2.8632 | overlap 4343559 4343557 TGTGGCCGTGATCGG GGCCGGCCC TGCC GGGCTGGCC TGTGCTGATGTATTA gltD 4343108 - 4344526 + | glutamate synthase subunit beta TERM 4654 4344593 - 4344556 - f 71 -6.9 -4.23647 | opp_overlap 4344555 4344561, overlap 4344557 AAATCATTCAATAAA CGCTAGGGCGGGTTC AATTCACA GAACCCGCCCTTTCT ATTTATTCTATTTAT TERM 4655 4344592 - 4344557 - f 77 -10.4 -3.13104 | opp_overlap 4344555 4344561, overlap 4344556 AATCATTCAATAAAC GCTAGGGCGGGTTC AATTCACA GAACCCGCCCTTTC TATTTATTCTATTTA TERM 4656 4344561 - 4344588 + F 100 -14.2 -4.48483 | opp_overlap 4344557 4344556, overlap 4344555 ATTCAATAAACGCTA GGGCGGGTTC AATTCACA GAACCCGCCC TTTCTATTTATTCTA YP_3813 4344967 - 4345452 + | hypothetical protein TERM 4657 4345571 - 4345543 - T 70 -5.2 -4.51238 | gap 1, overlap 4345549 CGCACAAAACAGAAA CGATAAGGGCGGC TAAC GCCGCCCTGAA-G AGATAGAGCCTGTAT TERM 4658 4345566 - 4345549 - T 100 -14.1 -3.69613 | overlap 4345543 AAACAGAAACGATAA GGGCGGC TAAC GCCGCCC TGAAGAGATAGAGCC TERM 4659 4345624 - 4345659 + T 76 -9.6 -3.41602 | gap 1, opp_overlap 4345613 TTAACCACGCGTAAT GCCG-GGCGGCCACCAC TCC GTGGCGGTTGCGGCGGC TTATCATCCGGTGAA sspB 4346120 - 4345605 - | ClpXP protease specificity-enhancing factor sspA 4346767 - 4346126 - | stringent starvation protein A TERM 4660 4347088 - 4347104 + G 100 -13.7 -4.62783 | opp_overlap 4347088 TCAGGCATAAAAAAA CCCGGTG AGA CACCGGG TTTTTACCATCAATC TERM 4661 4347104 - 4347088 - g 100 -13.7 -5.64274 | opp_overlap 4347088 TCAGGCATAAAAAAA CCCGGTG AGA CACCGGG TTTTTACCATCAATC YP_3816 4346947 - 4347144 + | hypothetical protein rpsI 4347533 - 4347141 - | 30S ribosomal protein S9 rplM 4347976 - 4347548 - | 50S ribosomal protein L13 TERM 4662 4347776 - 4347793 + g 79 -5.5 -4.91712 | CTTGTCTGTACGCTT GTTGCCG GTTA CAGCAAC TTTTTCTGCGTTCAG TERM 4663 4348100 - 4348124 + r 71 -8.8 -3.33162 | opp_overlap 4348104, overlap 4348104 CAATGCTGGCACTAT CAAAGTTTTT GGGAA AAAAACTTTG TTGTAACGTGGGGTC TERM 4664 4348235 - 4348216 - R 81 -11.4 -2.76249 | TAAACATGTTAAGTA CGGACGAC AAAT GTCGCCCG CCATAGAATAGCATT YP_3819 4349429 - 4348290 - | hypothetical protein TERM 4665 4349616 - 4349605 - H 71 -4.4 -4.7629 | TTATTAAGTGAAAAA GTTC TGCT GAAC AATGAAGTCAAAAAA YP_3820 4349641 - 4350045 + | cytochrome d ubiquinol oxidase subunit III TERM 4666 4351036 - 4351008 - g 72 -9.7 -3.35992 | gap 1, opp_overlap 4351010 ACTGATCGGAATTAA TACCGCCATCCT TGCGCC AGG-TGGCGGTA ATATCGGTATCGGCT degQ 4350316 - 4351689 + | protease TERM 4667 4351732 - 4351700 - T 95 -11.3 -3.89614 | opp_overlap 4351707, overlap 4351704 4351706 4351707 GCTAATTTGCAGAAA TAAATATCCTCCGGC ATA GCCGGAGGTTTTTCA TATGCGCCTATAAGG TERM 4668 4351728 - 4351704 - T 100 -9.9 -4.55697 | opp_overlap 4351707, overlap 4351700 4351706 4351707 ATTTGCAGAAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCATATGCGCCTAT TERM 4669 4351726 - 4351706 - T 100 -12.5 -3.88703 | opp_overlap 4351707, overlap 4351704 4351700 4351707 TTGCAGAAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 4670 4351707 - 4351725 + T 100 -16 -4.8048 | opp_overlap 4351706 4351704 4351700 4351707 TGCAGAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 4671 4351725 - 4351707 - T 100 -16 -2.92499 | opp_overlap 4351707, overlap 4351706 4351704 4351700 TGCAGAAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC tnp_43 4352315 - 4351806 - | transposase for the IS1541 insertion element TERM 4672 4352377 - 4352395 + H 100 -16 -4.36914 | opp_overlap 4352377 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 4673 4352395 - 4352377 - H 100 -16 -3.07307 | opp_overlap 4352377 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 4674 4352439 - 4352413 - H 100 -15.2 -4.82901 | overlap 4352414 TTCTGGGCACAAAAA TCGGACACAGCA CGA TGCTGTGTCCGC CTAACTCATGCTATT TERM 4675 4352438 - 4352414 - H 100 -18.7 -3.49419 | overlap 4352413 TCTGGGCACAAAAAT CGGACACAGCA CGA TGCTGTGTCCG CCTAACTCATGCTAT degS 4352490 - 4353578 + | serine endoprotease TERM 4676 4353675 - 4353699 + T 100 -8.6 -5.27335 | opp_overlap 4353675 TATAAACATAAAAAA TGCCAGCC CCAATCACC GGCTGGCA TTTTTATTTACCGAA TERM 4677 4353699 - 4353675 - T 100 -8.6 -5.59879 | opp_overlap 4353675 TATAAACATAAAAAA TGCCAGCC CCAATCACC GGCTGGCA TTTTTATTTACCGAA murA 4355030 - 4353759 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase bolA2 4355438 - 4355175 - | BolA-like protein TERM 4678 4355537 - 4355509 - R 84 -6.1 -5.04868 | gap 1, opp_overlap 4355509 TGAAACTAAAGAAAA GCCCCTGTG-AT GCCATT ATGCACAGGAGC TTGATTATCTTACCT YP_3826 4355878 - 4355576 - | putative anti-sigma B factor antagonist TERM 4679 4355784 - 4355808 + g 82 -12.2 -3.5764 | opp_overlap 4355797 GCCAGCAAGGTTTCA CGCTGTTGCC AAAGC GGTAACAGCG TTTCACGATCCAGTT YP_3827 4356537 - 4355914 - | hypothetical protein YP_3828 4357122 - 4356550 - | hypothetical protein YP_3829 4357894 - 4357112 - | hypothetical protein YP_3830 4358930 - 4358112 - | putative ABC transporter ATP-binding protein YrbF TERM 4680 4359597 - 4359607 + G 70 -2.4 -4.9645 | overlap 4359595 GTCATCTTGCTCTTG GCTG CTG CCGC TTTTATTGTTCTGAT YP_3831 4359195 - 4360169 + | putative calcium/sodium:proton antiporter gutQ1 4360193 - 4361266 + | D-arabinose 5-phosphate isomerase YP_3833 4361515 - 4362078 + | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase YP_3834 4362075 - 4362638 + | hypothetical protein YP_3835 4362601 - 4363167 + | hypothetical protein YP_3836 4363174 - 4363899 + | putative ABC transporter ATP-binding protein YhbG TERM 4681 4365136 - 4365146 + G 79 -6.8 -4.62336 | opp_overlap 4365102 4365095 GAAATTCTTGCACAG TCCC CGA GGGA TTTTTGAACTGAAGT rpoN 4363961 - 4365394 + | RNA polymerase factor sigma-54 TERM 4682 4365574 - 4365563 - f 71 -4.4 -4.88646 | AAAAAGTAAAACAAA TTGC AGAA GCAA CGGTACATGTGAATG TERM 4683 4365795 - 4365756 - f 100 -21.6 -2.88249 | opp_overlap 4365764 4365794, overlap 4365764 TACACTCGCTACATA GCCAGATACCGGTGGATA TTTA TTCCCACCGGTATCTGGC GTAAACAGCGCTTAA ptsN2 4365811 - 4366305 + | sugar-specific enzyme IIA component of PTS TERM 4684 4366532 - 4366514 - f 74 -10.3 -2.60496 | overlap 4366513 4366511 TGCGGCTCGAAAGAG GGTGGGT TCCGC ACCCACC ACACCCCGGTTTGTA YP_3840 4366611 - 4367465 + | hypothetical protein ptsO 4367462 - 4367734 + | phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr) TERM 4685 4367959 - 4367975 + F 100 -13.7 -6.06529 | AACCGATCCTGTAAG GCCCCTC GTT GAGGGGC TTTTTTTTGTCTGTC pyrB 4368072 - 4369007 + | aspartate carbamoyltransferase catalytic subunit pyrI 4369013 - 4369483 + | aspartate carbamoyltransferase regulatory subunit tdcF5 4369582 - 4370007 + | hypothetical protein TERM 4686 4370019 - 4370058 + F 100 -15 -5.05113 | TTAATCCCTCCCCCA TCACCGCATACGGCGGGT TATC GCCAGCCGCATGTGGTGA TTTTATTTCTCTCCG TERM 4687 4370393 - 4370383 - f 82 -6.8 -4.74706 | overlap 4370375 CGCAATAGCCAAAAA TGGC GTC GCCA TCCCATTACCTGATA YP_3845 4370420 - 4370782 + | hypothetical protein TERM 4688 4370885 - 4370855 - f 88 -7 -5.15634 | opp_overlap 4370855 CACCGCAGTAAAAAA TACCCTAACG GTGAGAAAATT CGTTAGGGTA TTCCTATGCTGCCAG TERM 4689 4371379 - 4371364 - g 70 -9 -3.63073 | opp_overlap 4371361 4371357 CATATTCTGCAACAA CGCCAT GTTG ATGGCG TGATCCTGTTCGGTT treR 4371016 - 4371969 + | trehalose repressor TERM 4690 4372076 - 4372063 - f 79 -6.7 -4.66938 | opp_overlap 4372063, overlap 4372065 ATCTTCAATACAAAA TGGGA ACGT TCCCA TTCCATAAAAATAAA TERM 4691 4372529 - 4372515 - g 76 -7.2 -4.32436 | overlap 4372519 ATAGCATCACCAAAA GAGATT GAA AATCTC TCAATGGTCAAAGGC TERM 4692 4373275 - 4373298 + G 70 -8.8 -3.65143 | overlap 4373273 CGGTGATGACCGGCA GTTTCGCACC GGTC GGTGCGGCAC TATTTGGTTTCCTGT treB 4372380 - 4373795 + | trehalose(maltose)-specific PTS system components IIBC TERM 4693 4373832 - 4373865 + F 75 -5.9 -4.67353 | gap 1, overlap 4373835 4373836 TCGATATAAGTTGTG TTCTCCCGCCAG-CGG TGA TCGTCTGGCGGGGTCA TTTTTCAATGAATAA TERM 4694 4373835 - 4373862 + F 89 -12 -3.26405 | gap 1, overlap 4373832 4373836 ATATAAGTTGTGTTC TCCCGCCAG-CGG TGA TCGTCTGGCGGGG TCATTTTTCAATGAA TERM 4695 4373836 - 4373861 + F 91 -13.3 -2.55361 | gap 1, overlap 4373835 4373832 TATAAGTTGTGTTCT CCCGCCAG-CGG TGA TCGTCTGGCGGG GTCATTTTTCAATGA TERM 4696 4374543 - 4374557 + G 87 -8.5 -4.84359 | overlap 4374545 CCCTAATGATCTGGA CGGCG ATGGC CGCCG TTTTTATACCGATGG treC 4373890 - 4375557 + | trehalose-6-phosphate hydrolase TERM 4697 4375642 - 4375676 + F 73 -10 -3.02829 | AGGGCCGGTGATAGG TGACTCCATCAGTGCA AAA TGTCCTGATGGAGCCG TATTCGCAAAATATA TERM 4698 4375841 - 4375873 + F 100 -14.1 -5.30339 | opp_overlap 4375846 CATTAAGCTATTTTC TAACACCCCCTCTCC TAT GGCGTGGGGGTGTTG TTTTTATGTTTTGCT TERM 4699 4375868 - 4375846 - f 76 -10.4 -3.03243 | opp_overlap 4375841 AGCTATTTTCTAACA CCCCCTCTCC TAT GGCGTGGGGG TGTTGTTTTTATGTT TERM 4700 4375976 - 4375989 + G 74 -9.5 -3.54475 | overlap 4375955 GCGTTGCTAGCGCAA CCGGC TTTT GCCGG TTCTGTGGTCGCAAC rnk 4375910 - 4376320 + | nucleoside diphosphate kinase regulator TERM 4701 4376419 - 4376387 - T 100 -15.7 -3.83921 | opp_overlap 4376381 4376391 GGTAATAGAAGATAA TAGAGGGTAACCGCC GCA GGCCATTACCCTCTA TCGCTCACTTTTATA YP_3850 4376936 - 4376544 - | putative cytochrome YP_3851 4377782 - 4377138 - | hypothetical protein TERM 4702 4377295 - 4377282 - G 71 -6.7 -4.24726 | ACAATAAGGGTAAAA CTGAC CAAC GTCAG AATCTAATATAAACA TERM 4703 4378009 - 4377965 - R 70 -5.1 -4.4773 | gap 2, opp_overlap 4377976, overlap 4377976 TCATATCAAGGAAAA GCGCATACAAACTCGCGGGTA TTTTC TACCCGCGAGTT-GTG-GAAC AGTAAGATGACAGGA TERM 4704 4377976 - 4378000 + r 100 -15.8 -3.29511 | opp_overlap 4377965 4377976 AAAAGCGCATACAAA CTCGCGGGTA TTTTC TACCCGCGAG TTGTGGAACAGTAAG TERM 4705 4378000 - 4377976 - R 100 -15.8 -4.08164 | opp_overlap 4377976, overlap 4377965 AAAAGCGCATACAAA CTCGCGGGTA TTTTC TACCCGCGAG TTGTGGAACAGTAAG pmbA 4379371 - 4378031 - | peptidase PmbA TERM 4706 4379330 - 4379344 + g 70 -10 -3.3344 | TGCAACAGCTTGTTC CAGCGT TTT ACGCTG TTCTGCAACTTGAGT TERM 4707 4379612 - 4379602 - g 84 -2.4 -5.54907 | CCCAGAAAATAAAAA CGAC GAT GACG ATGAGATTATCTGGG TERM 4708 4379789 - 4379774 - g 78 -2.4 -5.30189 | overlap 4379777 4379778 CAGAAGATCAAAAAA GAAGGC CGCC GCCGCC AGCTCCAGTTAATTG TERM 4709 4379789 - 4379777 - g 70 -4.7 -4.71318 | overlap 4379774 4379778 AAGATCAAAAAAGAA GGCCG CCG CCGCC AGCTCCAGTTAATTG YP_3853 4379546 - 4380100 + | hypothetical protein TERM 4710 4380142 - 4380095 - T 100 -10.5 -5.75342 | gap 1, opp_overlap 4380097 CTGGCTGAAAAAAAA CAGTAATCGGGCGGG-GCCGGG TCACT CCCGGCTCCCGACTCAATACTG TTGGCGGGCGTAATC TERM 4711 4380097 - 4380140 + T 71 -9.5 -3.02144 | gap 1, opp_overlap 4380095 GGCTGAAAAAAAACA GTAATCGGGCGGG-GCCGGG TCACT CCCGGCTCCCGACTCAATAC TGTTGGCGGGCGTAA YP_3854 4380509 - 4380228 - | putative ribonuclease inhibitor YP_3855 4380987 - 4380514 - | putative ribonuclease TERM 4712 4382414 - 4382433 + r 82 -7.8 -4.56597 | overlap 4382415 4382419 ACGCTGTAAAATCTC TGCTCGCT GTTT AGCGGGCG TTTTTCGCCAGGCAG TERM 4713 4382415 - 4382432 + r 71 -9.1 -3.33744 | overlap 4382414 4382419 CGCTGTAAAATCTCT GCTCGCT GTTT AGCGGGC GTTTTTCGCCAGGCA TERM 4714 4382778 - 4382756 - R 71 -7 -4.22858 | opp_overlap 4382760, overlap 4382760 AGAAGAGAGAAATAA CAAAGACGCC GTG AGCGCCTTTA TGAGGGCTCGAACCG TERM 4715 4382774 - 4382760 - R 75 -5.6 -4.65458 | opp_overlap 4382760, overlap 4382756 GAGAGAAATAACAAA GACGCC GTG AGCGCC TTTATGAGGGCTCGA YP_3857 4384872 - 4382917 - | p-hydroxybenzoic acid efflux subunit AaeB emrK2 4385809 - 4384874 - | p-hydroxybenzoic acid efflux subunit AaeA YP_3859 4386020 - 4385817 - | hypothetical protein TERM 4716 4385958 - 4385944 - G 86 -5 -5.22768 | ACAACAAAAAACAAA GCCAAT GAA ATTAGC AGCTCAAGAAATATC YP_3860 4386489 - 4386277 - | hypothetical protein lysR22 4386536 - 4387234 + | putative DNA-binding transcriptional regulator lysR23 4387486 - 4388361 + | LysR family transcriptional regulator TERM 4717 4388418 - 4388390 - T 78 -9.1 -3.84185 | CGTAGTTAAATACAA TTTGTTTAACTAA AAT TTAGTTAAACAGA AGATAACAATAAAAA YP_3863 4388683 - 4388522 - | hypothetical protein TERM 4718 4391017 - 4391007 - g 83 -5.4 -5.18355 | CTGAAAAATTAAAAA TCCA TCC TGGA ACCATAATTAAAATA tcaA1 4388774 - 4391104 + | putative insecticial toxin TERM 4719 4391203 - 4391173 - g 73 -2.7 -4.93877 | gap 1, overlap 4391177 4391181 CTGTATTAAATAAAA TTAACGAATCGCGC CGCG ACGC-ATTGGTTAA CTACTATCTTGCTAA TERM 4720 4393881 - 4393866 - g 70 -4.7 -4.59511 | opp_overlap 4393868 AATATGGCGCAAAAA CAGCT GAATTT AGCTG AGTTAGAGCAAGGCC TERM 4721 4394690 - 4394679 - g 78 -2.2 -5.34309 | ACTAGCAAACAAAAA CTGC TGCT GCAA AGCCTGAGCGACATC tcbA 4391145 - 4394738 + | putative toxin subunit TERM 4722 4394779 - 4394760 - f 83 -11.4 -3.06796 | opp_overlap 4394773, overlap 4394762 4394773 CGTTACCTCAGTCAA CAGGCCCC ACAG AGGGCCTG ATAGGAGAGCCCTTT TERM 4723 4395671 - 4395653 - g 73 -6 -4.5442 | CCGGTAATCATAAAA GGAAAATC CTG GAATTTCC GTCAGGACGCCTTCT tcaC1 4394795 - 4399285 + | insecticidal toxin complex TERM 4724 4399299 - 4399325 + F 71 -9.4 -2.90941 | opp_overlap 4399291, overlap 4399321 AATATTAGCCGCAGA GCCTAACCGG CCCCTTC CCGGTCAGGC TCTATACCCTGTCAT YP_3867 4399419 - 4399721 + | putative phage-related protein YP_3868 4399725 - 4400135 + | putative phage-related protein YP_3869 4400123 - 4400491 + | hypothetical protein YP_3870 4400478 - 4400651 + | hypothetical protein TERM 4725 4401089 - 4401114 + G 73 -3.1 -4.96848 | opp_overlap 4401082 4401089 ACGAGCAAGCCAAAG GCGGCCTGAAA ACAG TTACCGACCGC TTTTTCTATGCCACA TERM 4726 4403482 - 4403495 + G 71 -6.7 -4.14627 | opp_overlap 4403480 GACATAAAAGCAGCA CGTGA ATAC TCACG TTATTTATATAGCAA tccC1 4400692 - 4403523 + | putative toxin subunit TERM 4727 4403945 - 4403970 + GF 73 -3.1 -4.96848 | opp_overlap 4403938 4403945 4403957, overlap 4403957 ACGAGCAAGCCAAAG GCGGCCTGAAA ACGG TTACCGACCGC TTTTTCTATGCCACA tccC2 4403548 - 4406406 + | putative insecticidal toxin TERM 4728 4406450 - 4406422 - gT 100 -19.1 -3.67976 | opp_overlap 4406422 4406424 TTTATTAATTTTAAA CACCTTCCCTATT TTG AATAGGGAAGGTG TCTATACCCGTAATA TERM 4729 4406422 - 4406450 + GT 100 -19.1 -2.88861 | opp_overlap 4406422, overlap 4406424 TTTATTAATTTTAAA CACCTTCCCTATT TTG AATAGGGAAGGTG TCTATACCCGTAATA TERM 4730 4406424 - 4406448 + GT 100 -15.9 -2.99471 | opp_overlap 4406422, overlap 4406422 TATTAATTTTAAACA CCTTCCCTATT TTG AATAGGGAAGG TGTCTATACCCGTAA YP_3873 4406342 - 4406548 + | hypothetical protein TERM 4731 4406582 - 4406529 - T 73 -10.5 -2.50699 | overlap 4406526 GGTTAACTAATATAC CGATGCTTTGTTGGCACTAAATTTA GTAT CAAATGCAGTGCCAACAAAGCCTAA TACCCATATTGTATT tldD 4408054 - 4406609 - | protease TldD YP_3875 4408935 - 4408066 - | putative carbon-nitrogen hydrolase YP_3876 4412855 - 4408932 - | hypothetical protein TERM 4732 4410387 - 4410408 + g 73 -3 -4.96848 | gap 1 GTTCACCTGAACATG CAGTGG-CA ATGCC TGACCGCTG TTTTTATCTAGCGGC TERM 4733 4411324 - 4411345 + g 80 -10.1 -4.07687 | opp_overlap 4411328 GCATCGGTGGCATCA TACAGGCGG ATGC CCGCCAGTA TTTTCAGCCACGGCT cafA 4414418 - 4412949 - | ribonuclease G maf 4415007 - 4414408 - | Maf-like protein mreD 4415503 - 4415015 - | rod shape-determining protein MreD mreC 4416495 - 4415500 - | cell wall structural complex MreBCD transmembrane component MreC mreB 4417742 - 4416699 - | rod shape-determining protein MreB TERM 4734 4417510 - 4417495 - G 73 -6 -4.55295 | opp_overlap 4417494 4417496, overlap 4417496 TCCGTGACAAAGAAA TCGGCG ATAA CGCCGT CTTTCATTGGACGAA TERM 4735 4417496 - 4417509 + g 74 -9.5 -3.54146 | opp_overlap 4417495 4417496, overlap 4417494 CCGTGACAAAGAAAT CGGCG ATAA CGCCG TCTTTCATTGGACGA TERM 4736 4417509 - 4417496 - G 70 -9.5 -3.32695 | opp_overlap 4417496 4417494, overlap 4417495 CCGTGACAAAGAAAT CGGCG ATAA CGCCG TCTTTCATTGGACGA TERM 4737 4418077 - 4418087 + r 84 -2.6 -5.63517 | AGGCTAACATGGCCC TATT ACG AATA TTTTTTCTTTCCGGA rtn6 4419995 - 4418079 - | regulatory protein CsrD TERM 4738 4419868 - 4419883 + g 76 -5.4 -4.77165 | GCGGTCACAATACTT TGGAGC CGTT GTTCCA TTTTCTTCTGGCACA TERM 4739 4420244 - 4420257 + H 84 -3.8 -5.4433 | CGCTATATTGGCTCA CCCT TAACAC AGGG TTTTTATTTCTGTCT qor3 4420396 - 4421373 + | zinc-binding dehydrogenase TERM 4740 4421477 - 4421445 - f 89 -12 -3.26947 | opp_overlap 4421440 4421439 TAATCGTTACAGCAA CCACCGAGGTCAGT TTCAC ACTTGCCTCGGTGG TAGAAATTTCATATT TERM 4741 4422284 - 4422270 - g 74 -4.2 -4.82901 | opp_overlap 4422283 GCCTGGGCAGAAAAA CCGC TTTATTG GCGG GGGACTGGACTACCC TERM 4742 4422310 - 4422345 + G 74 -7.4 -4.14257 | opp_overlap 4422328 TACCCCTATGTCGAA GGGCTGCGGTTGGATG AAGC CATGCACCCGCTGGCC TTTATGGTTGTTGGC YP_3884 4421530 - 4422696 + | putative sulfite oxidase subunit YedY YP_3885 4422696 - 4423316 + | putative sulfite oxidase subunit YedZ aroQ 4423579 - 4424031 + | 3-dehydroquinate dehydratase TERM 4743 4424372 - 4424351 - g 80 -12.3 -3.40403 | TTTGCTGCACCACAA CAGCAGCCA GCGC TGGCTGCCG CCGTCGCCCCAGCAC accB 4424144 - 4424653 + | acetyl-CoA carboxylase biotin carboxyl carrier protein subunit accC2 4424665 - 4426014 + | acetyl-CoA carboxylase biotin carboxylase subunit TERM 4744 4426110 - 4426069 - f 79 -10.9 -3.17075 | opp_overlap 4426069 4426070 GGCCGGTTAATTGAA TTGCCCCCCAATATTGGAT AATA ACCTGATATTGGGGGGCAG TTTTTTATGGCATAA TERM 4745 4426069 - 4426110 + F 100 -15.3 -5.26316 | opp_overlap 4426069, overlap 4426070 GGCCGGTTAATTGAA TTGCCCCCCAATATTGGAT AATA ACCTGATATTGGGGGGCAG TTTTTTATGGCATAA TERM 4746 4426070 - 4426109 + F 100 -16.6 -3.75067 | opp_overlap 4426069, overlap 4426069 GCCGGTTAATTGAAT TGCCCCCCAATATTGGAT AATA ACCTGATATTGGGGGGCA GTTTTTTATGGCATA TERM 4747 4426139 - 4426171 + F 86 -12.1 -3.20435 | opp_overlap 4426140, overlap 4426140 AAACTGAAGTTAAAA AGCCTGAATTCTGTA GAG TGCGGAATTCAGGCC TTGATGGCTAATTAA TERM 4748 4426170 - 4426140 - f 100 -11.2 -4.75776 | opp_overlap 4426140 4426139 AACTGAAGTTAAAAA GCCTGAATTCTGTA GAG TGCGGAATTCAGGC CTTGATGGCTAATTA TERM 4749 4426140 - 4426170 + F 100 -15.6 -2.5194 | opp_overlap 4426140, overlap 4426139 AACTGAAGTTAAAAA GCCTGAATTCTGTA GAG TGCGGAATTCAGGC CTTGATGGCTAATTA TERM 4750 4426234 - 4426255 + F 75 -2.3 -5.40004 | overlap 4426235 AGCCGTATATCTTAC CTTCAGTTT ATTT AAGCTGAAA TTTTTTAATTTGCTC proP33 4427124 - 4427366 + | hypothetical protein TERM 4751 4427475 - 4427489 + G 73 -5.6 -4.66938 | ATATTTTATCGGCAA CCGTTC GAT GGGCGG TTTTGTATTGGCGAT panF 4427356 - 4428810 + | sodium/panthothenate symporter TERM 4752 4428869 - 4428838 - f 100 -15.9 -2.77148 | overlap 4428835 4428833 4428831 TCTATCAACACATCA GCCGGTATCGTGG TTATGG CCCCGATACCGGC GCTTGAGAGAATTGC TERM 4753 4429566 - 4429534 - g 77 -9.2 -4.09685 | gap 1, opp_overlap 4429526 CTGTATCTGGCAAAA GACCA-GCCCGCAGA ACTA TCTGCTGACGTGGTC GTGGCCAATATTCTG TERM 4754 4429734 - 4429705 - g 71 -7.2 -3.99324 | GCCTATGAGGATAAA TTCATTCTCGAC CCAGTC GCCGAGAAAGAA GAATGGTGCCGCATT prmA 4428886 - 4429767 + | ribosomal protein L11 methyltransferase TERM 4755 4429808 - 4429783 - f 100 -19.1 -2.52464 | opp_overlap 4429804, overlap 4429770 TTTTGCCTTAACTGA CGCACACGGAC TTGA GTCCGTGTGCG TCACAACTCACCTTT YP_3892 4430254 - 4431321 + | tRNA-dihydrouridine synthase B fis 4431346 - 4431642 + | DNA-binding protein Fis TERM 4756 4431672 - 4431697 + T 89 -6.8 -5.32882 | opp_overlap 4431672 GGTGTTGTTTAAAAA GGCGTTATCC TTAATT GGTTAGCGCC TTTTTTATAATAATG YP_3894 4432165 - 4432046 - | putative colicin immunity protein YP_3895 4432872 - 4432396 - | hypothetical protein gntR 4433663 - 4432938 - | GntR family transcriptional regulator proP34 4435054 - 4433690 - | putative metabolite transport protein YP_3898 4435645 - 4435208 - | putative gamma carboxymuconolactone decarboxylase mmsB 4436671 - 4435781 - | putative 2-hydroxy-3-oxopropionate reductase gloB5 4437563 - 4436736 - | hypothetical protein pcp2 4438018 - 4438491 + | outer membrane lipoprotein TERM 4757 4438526 - 4438562 + F 78 -10.3 -3.33162 | gap 1, overlap 4438527 CGTTAACCCCAGTTT TCAGTCTGTAGGC-TG ATAGCC CATGCCTACGGACTGG TTATCAAATGCCGTA TERM 4758 4438527 - 4438561 + F 80 -11.6 -2.59683 | gap 1, overlap 4438526 GTTAACCCCAGTTTT CAGTCTGTAGGC-TG ATAGCC CATGCCTACGGACTG GTTATCAAATGCCGT YP_3902 4438767 - 4438931 + | hypothetical protein cspa1 4439024 - 4439236 + | major cold shock protein Cspa1 cspI 4439421 - 4439708 + | cold shock-like protein TERM 4759 4439813 - 4439789 - T 100 -9.9 -4.47456 | opp_overlap 4439792, overlap 4439791 4439792 ATACCGAATAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCATATGCGCCTAT TERM 4760 4439811 - 4439791 - T 100 -12.5 -3.83566 | opp_overlap 4439792, overlap 4439789 4439792 ACCGAATAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 4761 4439810 - 4439792 - T 100 -16 -2.89055 | opp_overlap 4439792, overlap 4439791 4439789 CCGAATAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 4762 4439792 - 4439810 + T 100 -16 -4.8048 | opp_overlap 4439792 4439791 4439789 CCGAATAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC tnp_44 4440400 - 4439891 - | transposase for the IS1541 insertion element TERM 4763 4440480 - 4440462 - H 100 -16 -3.07307 | opp_overlap 4440462 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 4764 4440462 - 4440480 + H 100 -16 -4.36914 | opp_overlap 4440462 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 4765 4440519 - 4440498 - H 71 -4.4 -4.82901 | opp_overlap 4440501, overlap 4440501 TTCTGGGCACAAAAA GAACCTGC CTCCGT GCAGGTTT TTTTGTGCCTATGAC TERM 4766 4440501 - 4440516 + H 100 -6.1 -5.65177 | opp_overlap 4440501 4440498 TGGGCACAAAAAGAA CCTGC CTCCGT GCAGG TTTTTTTGTGCCTAT TERM 4767 4440516 - 4440501 - H 74 -6.1 -4.52873 | opp_overlap 4440501, overlap 4440498 TGGGCACAAAAAGAA CCTGC CTCCGT GCAGG TTTTTTTGTGCCTAT TERM 4768 4440855 - 4440871 + G 73 -2.9 -4.93296 | overlap 4440854 4440856 TCTTAAAAGTGAGAC TCAGGAC CCT GTGCTGG TTTTTATCGTCATGG TERM 4769 4441872 - 4441857 - g 81 -6.2 -5.04082 | overlap 4441846 CAAAGAACAAGAAAA TGTCTT ATCC AAGACA CTTAACATTCTTGAG smc3 4440754 - 4441929 + | hypothetical protein TERM 4770 4442012 - 4441967 - T 88 -6.8 -5.12707 | opp_overlap 4441966 4441967 TTAAAGCGTAAAAAA CCCGCGCATGGACTGGCC CCATAAAGTT GGACAGTTCATACCCGGG CTTGTCAGGAAAGAT YP_3907 4443382 - 4442036 - | hypothetical protein TERM 4771 4444009 - 4444027 + G 71 -6.7 -4.1552 | opp_overlap 4444020 CCATTCTGCTTTATT TGGCCGA TAAAT TCGGTCA TTTCTTACCGAAATC TERM 4772 4444093 - 4444114 + G 74 -7.9 -4.20883 | opp_overlap 4444089, overlap 4444080 4444089 TCTGGCTACAAGGTG CAGCCCCTT ATTT AGGGGGCGG TTTTGGGCATTTTTA gst3 4443633 - 4444487 + | putative glutathione S-transferase YghU TERM 4773 4444546 - 4444525 - T 70 -3.6 -4.85599 | CTGACCTGATAAAAA GAACCGGC CTTAGT GCAGGCTC AGAGTGCTGAAAAAA TERM 4774 4444618 - 4444643 + T 86 -9 -4.32857 | gap 1, opp_overlap 4444618 ACTGACATAAAAAAA CACCGC-GCGG CCATA CCGTTGCGGTG TTTCTCTTTCACGCG TERM 4775 4444643 - 4444618 - T 100 -7.5 -5.72616 | gap 1, opp_overlap 4444618 ACTGACATAAAAAAA CACCGC-GCGGC CAT ACCGTTGCGGTG TTTCTCTTTCACGCG gutQ2 4445282 - 4444677 - | putative phosphosugar isomerase/binding protein araB2 4446931 - 4445279 - | putative carbohydrate kinase araH16 4447888 - 4446935 - | putative ABC transporter, permease protein araH17 4448879 - 4447890 - | putative branched-chain amino acid transport system, permease component TERM 4776 4448855 - 4448838 - G 71 -5.5 -4.55118 | opp_overlap 4448845 CAACCCGAGATAAAA CTCATGG TGCC CCGTGAG TTGGCGCAGTTTTAG mglA10 4450368 - 4448872 - | ABC transporter ATP binding protein rbsB13 4451630 - 4450572 - | putative periplasmic binding protein ddg 4452355 - 4453275 + | lipid A biosynthesis palmitoleoyl acyltransferase TERM 4777 4454049 - 4454017 - g 86 -8.4 -4.74801 | opp_overlap 4454017 4454016 TAATCTGAGCAAAAA GCGGCCATTAACGC GAAAT GCGTTAGTCACCGC CTTTGGTGAACCCAT YP_3916 4453319 - 4454614 + | hypothetical protein TERM 4778 4454820 - 4454802 - T 100 -12.4 -3.61268 | CATGTAATCGGTAAA CGGGGCCA AAT TAGCCCCG TCCGTAAGATATTAA nhaP 4456502 - 4454832 - | putative putative Na(+)/H(+) exchanger protein TERM 4779 4456678 - 4456642 - R 76 -9.3 -3.45514 | overlap 4456636 4456643 GATATATAACATTAA GTTCACATCGGGGAGGA TAA TCCCCCCCGATGCCTGC AACCAATTGTTATTA YP_3918 4458185 - 4456830 - | putative xanthine/uracil permease TERM 4780 4457284 - 4457261 - G 70 -4.6 -4.64657 | gap 1, opp_overlap 4457282, overlap 4457263 CCAAACCCGCAAAAA TG-CTACTGAC GGA GTCAGTGGTCA GCGCTTTACCACCGC TERM 4781 4458013 - 4458000 - G 72 -8.1 -3.86346 | opp_overlap 4458007, overlap 4458002 GCAGGTCGCGACAAA CACCG CCGT CGGTG GGAAACCGGCTTTGC TERM 4782 4458527 - 4458568 + H 88 -11.1 -3.75015 | gap 1, opp_overlap 4458521 4458530 4458532, overlap 4458531 GAATAAACATCGCTC AAACACCTTATTGTAGCTAC ATC GTAGCTACAATAAGG-GTAA TTTAATGGAGGTTAT TERM 4783 4458565 - 4458530 - H 100 -17.2 -3.58329 | gap 1, opp_overlap 4458527 4458531, overlap 4458521 4458532 TAAACATCGCTCAAA CACCTTATTGTAGCTAC ATC GTAGCTACAATAAGG-G TAATTTAATGGAGGT TERM 4784 4458531 - 4458565 + H 100 -17.4 -2.96873 | opp_overlap 4458530 4458521 4458532, overlap 4458527 AAACATCGCTCAAAC ACCTTATTGTAGCTAC ATC GTAGCTACAATAAGGG TAATTTAATGGAGGT TERM 4785 4458564 - 4458532 - H 100 -20.9 -3.36341 | opp_overlap 4458531 4458527, overlap 4458530 4458521 AACATCGCTCAAACA CCTTATTGTAGCTAC ATC GTAGCTACAATAAGG GTAATTTAATGGAGG relB 4458639 - 4458842 + | putative DNA-damage-inducible protein TERM 4786 4458898 - 4458881 - T 70 -2.7 -5.00884 | AGCCGCTTTAAAAAA GATGCAA AGCG TTACACC AAGAATAAAAAGGCG TERM 4787 4459007 - 4458981 - T 84 -10.1 -3.74872 | gap 1, opp_overlap 4458990, overlap 4458982 4458997 AGGCAGGGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 4788 4459008 - 4458982 - T 72 -10.1 -2.84602 | gap 1, opp_overlap 4458990, overlap 4458981 4458997 GGCAGGGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT ssuB 4460276 - 4459461 - | aliphatic sulfonates transport ATP-binding subunit TERM 4789 4459843 - 4459819 - G 95 -11.3 -4.57882 | TCCAACAACAATAAA CGGGGGCGATG GAT CAGCGCCCGCG CCAGTGCAACACGTT ssuC 4461070 - 4460273 - | putative aliphatic sulfonates transport permease protein ssuD 4462227 - 4461079 - | alkanesulfonate monooxygenase ssuE 4463964 - 4463383 - | NAD(P)H-dependent FMN reductase deoC3 4464435 - 4465136 + | putative deoxyribose-phosphate aldolase TERM 4790 4465464 - 4465484 + G 82 -11.9 -3.58536 | GAGGTCGCCTATGCG GGTGTCGTC GGT GATGACACC TTTGGCCATGAATTT rbsK5 4465290 - 4466222 + | carbohydrate kinase rbsD2 4466228 - 4466731 + | putative carbohydrate transport protein araC8 4467834 - 4466893 - | AraC family transcriptional regulator mviM6 4468029 - 4469159 + | putative oxidoreductase YP_3930 4469156 - 4470055 + | hypothetical protein TERM 4791 4470115 - 4470093 - f 100 -4 -6.14618 | opp_overlap 4470094, overlap 4470094 TATAAAACAAAAAAA TGTGGCTGGC TAA ACCAGTCACT TTGTATCACTAAAAA TERM 4792 4470114 - 4470094 - f 75 -7.5 -4.25111 | opp_overlap 4470094, overlap 4470093 ATAAAACAAAAAAAT GTGGCTGGC TAA ACCAGTCAC TTTGTATCACTAAAA TERM 4793 4470094 - 4470114 + F 80 -9 -4.0641 | opp_overlap 4470094 4470093 ATAAAACAAAAAAAT GTGGCTGG CTAAA CCAGTCAC TTTGTATCACTAAAA TERM 4794 4471639 - 4471660 + G 77 -10.1 -3.74693 | TTTATTATCGAGTTC GGTGACCGC CTGA GCGATCACC TTTAATACGGTGGCA YP_3931 4470457 - 4471665 + | transposase for the IS285 insertion element YP_3932 4472519 - 4471725 - | hypothetical protein rhsA3 4477069 - 4472528 - | hypothetical protein TERM 4795 4473595 - 4473607 + g 70 -4.7 -4.69027 | overlap 4473576 4473599 AGCGCCACAGCTGTG GCCGG TAG CCGTC TTTTTGGCTGCGTTT TERM 4796 4476968 - 4476996 + g 77 -10.2 -3.62096 | opp_overlap 4476963, overlap 4476966 GACCTGATAATCCGT CCGCGCCGGG CTCTGTTGC CCCAGCGCGG TTTGACGTAATGCCG YP_3934 4477530 - 4477108 - | hypothetical protein vgrG6 4479731 - 4477533 - | putative Rhs accessory genetic element TERM 4797 4477765 - 4477744 - G 73 -5.1 -4.65916 | gap 1, opp_overlap 4477744, overlap 4477746 TTCACCTGAATAAAA TTCG-CGCAG GTA CTGCGACGCA CTTTGATCGTCTCGG YP_3936 4479929 - 4479753 - | hypothetical protein TERM 4798 4479839 - 4479851 + g 75 -10.5 -3.39449 | opp_overlap 4479837 4479839 TTTGTTTTATCAAGA CCGGC GAG GCCGG TTGATGTTCATCGGC TERM 4799 4479851 - 4479839 - G 71 -10.5 -3.13403 | opp_overlap 4479839, overlap 4479837 TTTGTTTTATCAAGA CCGGC GAG GCCGG TTGATGTTCATCGGC TERM 4800 4480225 - 4480193 - g 70 -2.6 -4.95843 | opp_overlap 4480197 ACATAAAACACAAAA GGAAGTCGCGACCC GTATT GGCTTGCAACTTTC ACAGTACAATAAATA hipB6 4480011 - 4480499 + | putative transcriptional regulatory protein TERM 4801 4480550 - 4480519 - f 93 -12.3 -3.0752 | overlap 4480521 CACAGTATTTTAACA CAGGGTTGAGGTG TATCAG CACCTCAGCCCCG CTAACCACAAGCAAC TERM 4802 4480548 - 4480521 - f 84 -11.3 -3.09289 | overlap 4480519 CAGTATTTTAACACA GGGTTGAGGTG TATCAG CACCTCAGCCC CGCTAACCACAAGCA YP_3938 4480581 - 4480805 + | hypothetical protein YP_3939 4480881 - 4481072 + | hypothetical protein TERM 4803 4481104 - 4481082 - T 72 -9.2 -3.19175 | TTGTAATATATTCAA GGAGGATC CAACAAT GATCCTCC CCATACGCTTACATG YP_3940 4481607 - 4481122 - | hypothetical protein rhsA4 4