TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.510096 %AT, 3892613 nt, 32902 terms. Intergenic: 0.583565 %AT, H2T: 615049 nt, 5060 terms; T2T: 155081 nt, 3309 terms; H2H: 242512 nt, 3557 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|113911685|ref|NC_006153.2| Yersinia pseudotuberculosis IP 32953 plasmid pYV, complete sequence (length 68525) pYV0001 2210 - 12 - | ypkA; putative targeted effector protein kinase TERM 1 359 - 384 + g 88 -13.3 -3.20723 | opp_overlap 343, overlap 348 ATAGTTGCGCTTTCG CACTCTCCTGC TGCT GCTGGAGAGTG TTCAATTGCTGCGAC TERM 2 2054 - 2044 - G 73 -2.4 -5.14985 | CGAAAGAGAGAAAAA CCAC TGT GGGG GTTCAAGCGCAACAC pYV0002 2667 - 2218 - | hypothetical protein TERM 3 2487 - 2454 - G 100 -5.9 -5.84432 | gap 1, opp_overlap 2464, overlap 2455 TATAACAGAAAAAAA GCT-GACTAGCGGCGC TGC GCGCCTCTGGTCCAGA AAATCCTAAGATTGG TERM 4 2486 - 2455 - G 78 -9.4 -4.08219 | gap 1, opp_overlap 2464, overlap 2454 ATAACAGAAAAAAAG CT-GACTAGCGGCGC TGC GCGCCTCTGGTCCAG AAAATCCTAAGATTG TERM 5 2464 - 2476 + g 71 -10.5 -2.78463 | opp_overlap 2455 2454 AAAAAGCTGACTAGC GGCGC TGC GCGCC TCTGGTCCAGAAAAT pYV0003 3239 - 2919 - | putative transposase remnant TERM 6 3320 - 3309 - R 78 -7.2 -4.45168 | GTTGCAAAAGACAAA GGCG GCTT CGCC TTGCCAGGGCTGATG pYV0004 3650 - 3411 - | hypothetical protein TERM 7 4245 - 4283 + r 100 -20.2 -4.7497 | opp_overlap 4245 AACACTCATTGTAAA GCCACTCTGTTCCGGGCC GTT GGCCCGGGGCGGGGCGGC TTTTTAGTGGGTGAG TERM 8 4283 - 4245 - R 100 -13.6 -3.61922 | opp_overlap 4245 AACACTCATTGTAAA GCCACTCTGTTCCGGGCC GTT GGCCCGGGGCGGGGCGGC TTTTTAGTGGGTGAG pYV0005 5701 - 4823 - | replication protein TERM 9 5334 - 5315 - G 77 -4.8 -4.9792 | overlap 5317 CAGCTCAGATAAAAA GCGCAGCG CACG CGTGGCGC GGGTGATGGAAAGGT TERM 10 5505 - 5459 - G 70 -9.5 -3.15249 | gap 1 CATACCCTGCAGTAA TGCATCGATAGCACGCCGACGT AGTA ACGGCGGCATACGAT-GACGCA AACTCAGAGAACGCG TERM 11 5770 - 5796 + H 83 -8.9 -4.18018 | gap 1 ATGCACATATACTCC CTGTATAG-AGC AACA GCTTCTATACAG TTTTAAGTGGGCCCC TERM 12 5808 - 5854 + G 88 -7.4 -5.1417 | gap 1 ACAGTTTTAAGTGGG CCCCGGTAACCTTC-TCGCCT CGCCAA AGATGAGGAAGTTTATCGGGG TTTTTGCTTTTCTGG pYV0006 5803 - 5955 + | hypothetical protein pYV0007 6252 - 5998 - | replication protein pYV0008 6779 - 7183 + | transposase remnant pYV0009 7806 - 7489 - | hyothetical protein pYV0010 8436 - 7978 - | hypothetical protein TERM 13 8444 - 8408 - G 100 -28.3 -3.35798 | opp_overlap 8413, overlap 8413 ACTGCGTACTGATAA GTAAACCAATGGGCGGC CAT GCCGCCCATTGGTTTAC TCCAGCGCCGCGTAA TERM 14 8413 - 8439 + g 100 -22.4 -3.72576 | opp_overlap 8408 8413 GTACTGATAAGTAAA CCAATGGGCGGC CAT GCCGCCCATTGG TTTACTCCAGCGCCG TERM 15 8439 - 8413 - G 100 -22.4 -4.00868 | opp_overlap 8413, overlap 8408 GTACTGATAAGTAAA CCAATGGGCGGC CAT GCCGCCCATTGG TTTACTCCAGCGCCG pYV0011 8586 - 8774 + | transposase remname pYV0012 8980 - 8771 - | hypothetical protein TERM 16 9074 - 9039 - R 89 -12.1 -3.30443 | opp_overlap 9044, overlap 9044 TCATTAGCATATTAA TAAAACACCGATTAC GATTAT GTAATCGGTGTTTTC CTATAGACTTGTTAA TERM 17 9044 - 9069 + r 100 -12.7 -4.35518 | opp_overlap 9039 9044 AGCATATTAATAAAA CACCGATTACG ATTA TGTAATCGGTG TTTTCCTATAGACTT TERM 18 9069 - 9044 - R 100 -12 -4.76075 | opp_overlap 9044, overlap 9039 AGCATATTAATAAAA CACCGATTAC GATTAT GTAATCGGTG TTTTCCTATAGACTT pYV0013 10401 - 9103 - | hypothetical protein TERM 19 9564 - 9576 + g 75 -3.4 -5.0133 | AAGTTGTTCTGGCAA CACT ATTTG AGTG TTTTTTGGCCGCATC TERM 20 10029 - 9989 - G 81 -11.3 -3.65199 | AATGCCTTACTTAAA GGACCAATTGCAACAGA ATTAACG CCTGTTGCAATTGAACC AGCGCCCACAGCAAC TERM 21 10148 - 10158 + g 75 -5.4 -4.76409 | GGTTGTATTGCTTCT GCTA ATC TAGC TCTTTTTTTTTCTGG pYV0016 13701 - 11386 - | tnpA; putative transposase protein TERM 22 12367 - 12335 - G 70 -9.7 -3.17901 | overlap 12339 ATACCGTCAACTGAA GCCACCTCGCCGCCA CCC CAGCGGCGAGCAAGC TCCAGCGTGGACTGA TERM 23 12814 - 12831 + g 73 -9.9 -3.35774 | opp_overlap 12785 TCTCCAGGTTTCATC CAGTTGG ACCG CCAACTG TTGTACGCCTTTATG pYV0017 13865 - 14416 + | putative resolvase pYV0018 15467 - 15733 + | putative transposase pYV0019 15757 - 16566 + | putative transposase pYV0020 17139 - 16714 - | sycH; putative yopH targeting protein pYV0021 17915 - 17484 - | putative transposase pYV0022 19087 - 17915 - | putative transposase TERM 24 18855 - 18870 + g 72 -10.4 -3.03338 | ATTGCCTTAATTTCC GCGAGG ATGA CCTCGC TATTCCAGACATTCT pYV0023 19220 - 19834 + | transposase remnant pYV0024 20289 - 19897 - | sycE, yerA; putative yopE chaperone TERM 25 20421 - 20433 + H 76 -7.7 -4.11394 | CAGCGATTTTTTATA TAGCC ATC GGCTA TTTTCCCACTAAGAT pYV0025 20483 - 21142 + | putative outer membrane virulence protein TERM 26 21157 - 21175 + T 71 -3 -4.99638 | opp_overlap 21155 21158, overlap 21158 ATATGGATAAAAACA AGGGGATA GTG TTTCCCCC TTTTTCTATCAATAT TERM 27 21174 - 21158 - T 74 -6.5 -4.5448 | opp_overlap 21157 21158, overlap 21155 TATGGATAAAAACAA GGGGATA GTG TTTCCCC CTTTTTCTATCAATA TERM 28 21200 - 21229 + T 74 -4.4 -5.06451 | gap 2, opp_overlap 21199, overlap 21199 21201 CAATATTGCGAATAT C--TTCGTCCCTGA TCTT TCAGGGGCGAATCG TTTTTTAGCATGCTC TERM 29 21201 - 21226 + T 100 -14.1 -3.38726 | opp_overlap 21199, overlap 21199 21200 AATATTGCGAATATC TTCGTCCCTGA TCTT TCAGGGGCGAA TCGTTTTTTAGCATG pYV0026 21581 - 21282 - | hypothetical protein pYV0027 21849 - 21574 - | hypothetical protein pYV0028 22163 - 21960 - | putative transposase remnant TERM 30 22433 - 22407 - g 100 -13.1 -4.72986 | TATCGCTATCAAAAA GCCGACATCAT GCTTA ATGACGTCGGC AGTCGACCAGGTCAG pYV0029 22359 - 22532 + | hypothetical protein pYV0030 22975 - 22682 - | hypothetical protein TERM 31 23100 - 23082 - R 73 -5.9 -4.55209 | opp_overlap 23082 TATACACTAAATAAA GGCGGGC AGACA ACCCACC TTGTTCTGATCTTAT pYV0031 24088 - 23123 - | plasmid-partitioning protein pYV0032 25293 - 24085 - | plasmid-partitioning protein SopA TERM 32 24189 - 24156 - G 70 -7.6 -3.84451 | gap 2, opp_overlap 24174 24177 GCTCCCAAATCGAAA CAGCGTT--ACGCCAA GCAG CTGGCGTTGAACGCTG GTTAGCTGCCTGTTC pYV0033 25800 - 25913 + | hypothetical protein pYV0034 26245 - 26051 - | putative transposase remnant pYV0035 26815 - 26357 - | hypothetical protein pYV0036 27102 - 26842 - | hypothetical protein pYV0039 28353 - 28171 - | putative transposase pYV0040 29039 - 28491 - | yop targeting protein yopK, yopQ TERM 33 28593 - 28576 - G 80 -4.9 -5.16133 | opp_overlap 28579, overlap 28577 AGCATAATACAAAAA CGATGAA AATT TTCATCA TATAAATATTTTTTT TERM 34 28618 - 28635 + g 71 -4.9 -4.63527 | overlap 28619 TTTTTTATGTCATCA TTCTCTA TAAG TAGAGAG TTTTTCGGATCATAA TERM 35 29142 - 29132 - H 74 -4 -4.91712 | CGTAATTTATAAAAA TAGA ATA TCTA CTCTCAATGAGCTTC TERM 36 29772 - 29787 + G 72 -6.2 -4.46212 | CCTTCAGTATGATTA TGTATC GCAT GATACA TTTTGTACTCAGCAC pYV0041 29513 - 30481 + | yop targeted effector yopT pYV0042 30481 - 30873 + | yopT chaperone TERM 37 30955 - 30934 - f 70 -7.5 -3.8397 | opp_overlap 30931 30934 30936 ACATAGTTACAATAA TATCTATTA AATT TAATAGATA TGGTTTATATAATAA pYV0043 31368 - 31559 + | transposase remnant TERM 38 31880 - 31898 + G 71 -3 -4.93898 | opp_overlap 31868, overlap 31881 31884 AACGACTAGTGATAG CCACCGCA TTG TGCGCTGC TTTTTATGCTGGTAT pYV0044 31576 - 31995 + | hypothetical protein pYV0045 32715 - 32524 - | hypothetical protein pYV0046 32890 - 33189 + | putative transposase remnant pYV0047 34884 - 33232 - | yopM; putative targeted effector protein TERM 39 34800 - 34790 - G 74 -4 -5.00616 | opp_overlap 34790 GGTTCTTGCAAAAAA GTAT TAG ATAC ATTTCTTGGATTTAT pYV0048 35104 - 35009 - | hypothetical protein pYV0049 35424 - 35209 - | hypothetical protein pYV0050 35445 - 35567 + | hypothetical protein pYV0051 35593 - 35916 + | hypothetical protein pYV0052 35951 - 36073 + | hypothetical protein pYV0053 36160 - 36327 + | hypothetical protein TERM 40 36422 - 36451 + T 85 -9.4 -4.10007 | opp_overlap 36417 36423 36448, overlap 36423 36448 36448 AATTTAATAATCACA ACCCTGGATTAA CTAATA TTAATCCAGGGC TTTTCAGCACCTTAT TERM 41 36423 - 36450 + T 95 -12.9 -3.05522 | opp_overlap 36417 36423 36448, overlap 36422 36448 36448 ATTTAATAATCACAA CCCTGGATTAA CTAATA TTAATCCAGGG CTTTTCAGCACCTTA TERM 42 36450 - 36423 - T 100 -13.6 -3.6149 | opp_overlap 36423 36422 36448 36448, overlap 36417 36448 ATTTAATAATCACAA CCCTGGATTAAC TAAT ATTAATCCAGGG CTTTTCAGCACCTTA pYV0054 37471 - 36551 - | yopD; putative Yop negative regulation/targeting component pYV0055 38695 - 37490 - | yopB; putative Yop targeting protein TERM 43 38303 - 38319 + g 87 -6.5 -5.14985 | opp_overlap 38302 38304, overlap 38304 GTTTTGTTCATGAAG ACGCTGA ATA TCAGCGA TTTTTATGTCTTTGC TERM 44 38304 - 38318 + g 76 -10 -3.67364 | opp_overlap 38302 38304, overlap 38303 TTTTGTTCATGAAGA CGCTGA ATA TCAGCG ATTTTTATGTCTTTG TERM 45 38318 - 38304 - G 70 -10 -3.13403 | opp_overlap 38304 38303, overlap 38302 TTTTGTTCATGAAGA CGCTGA ATA TCAGCG ATTTTTATGTCTTTG pYV0056 39179 - 38673 - | lcrH, sycD; low calcium response protein H pYV0057 40172 - 39192 - | lcrV; putative V antigen, antihost protein/regulator TERM 46 39300 - 39310 + g 75 -3.2 -5.08824 | opp_overlap 39295, overlap 39295 TGATGTAATATCAGA CAGC TGA GTTG TTTTTTGGCTAACCA pYV0058 40461 - 40174 - | lcrG; putative Yop regulator pYV0059 40943 - 40503 - | hypothetical protein pYV0060 43054 - 40940 - | lcrD, yscV; putative membrane-bound Yop protein TERM 47 42359 - 42328 - G 79 -9.5 -3.89822 | CAGGTACCTGAGAAA CCATCCCATCCCC GACAGT GAGGATGGAATAG AGTTGCAGTGCCTCA pYV0061 43385 - 43041 - | yscY; putative type III secretion protein pYV0062 43750 - 43382 - | yscX; putative type III secretion protein pYV0063 44118 - 43747 - | sycN; putative type III secretion protein pYV0064 44383 - 44105 - | tyeA; putative Yop secretion and targeting protein pYV0065 45245 - 44364 - | yopN, lcrE; putative membrane-bound Yop targeting protein TERM 48 45378 - 45395 + G 71 -4.1 -4.7497 | opp_overlap 45368 45367, overlap 45367 AAAACTCGCGGCTCC CGCTACA ATTT TTTAGCG TTTTTAGTCACTAAA pYV0066 45305 - 45409 + | hypothetical protein TERM 49 45601 - 45632 + G 75 -11.6 -2.74605 | opp_overlap 45607, overlap 45598 45598 TTACTTACGTAACCC TGACAACAGCCTGT CTTT ACAGGCTGAAGTCA TAGGTTTTGCCCAAC TERM 50 45626 - 45607 - g 85 -12.2 -3.3344 | opp_overlap 45601 45598 45598 ACGTAACCCTGACAA CAGCCTGT CTTT ACAGGCTG AAGTCATAGGTTTTG pYV0067 45443 - 46762 + | type III secretion system ATPase pYV0068 46759 - 47223 + | yscO; putative type III secretion protein pYV0069 47223 - 48590 + | yscP; putative type III secretion protein pYV0070 48587 - 49510 + | type III secretion system protein pYV0071 49507 - 50160 + | type III secretion system protein pYV0072 50162 - 50428 + | yscS; putative type III secretion protein TERM 51 50892 - 50904 + G 73 -4.7 -4.67011 | opp_overlap 50890 50889, overlap 50890 50889 CAGCTATGTAAATTG GCCGG TGG CCAGC TTTTTCCCTGCAGTT pYV0073 50425 - 51210 + | yscT; putative type III secretion protein pYV0074 51210 - 52274 + | yscU; putative type III secretion protein TERM 52 52633 - 52671 + F 100 -19.2 -4.03234 | opp_overlap 52639, overlap 52634 CTGATTCCGATTCTA ACCAAACATCCTTTCTTT ATG AAAGAAAGGATGTTTGGC TTTATATGCGCAAGG TERM 53 52634 - 52670 + F 100 -22.7 -3.01726 | opp_overlap 52639, overlap 52633 TGATTCCGATTCTAA CCAAACATCCTTTCTTT ATG AAAGAAAGGATGTTTGG CTTTATATGCGCAAG TERM 54 52665 - 52639 - f 100 -15.4 -3.91911 | opp_overlap 52634 52633 CCGATTCTAACCAAA CATCCTTTCTTT ATG AAAGAAAGGATG TTTGGCTTTATATGC TERM 55 53042 - 53052 + G 75 -5.4 -4.73973 | opp_overlap 53040 53042 ACTCATTTCGAAACA GGTA ACC TACC TTTATTCTTTTCTAT pYV0075 52850 - 53245 + | virG; putative Yop targeting lipoprotein pYV0076 53369 - 54184 + | lcrF, virF; putative thermoregulatory protein pYV0077 54263 - 54361 + | hypothetical protein pYV0078 54587 - 55000 + | hypothetical protein TERM 56 56305 - 56293 - g 74 -4.1 -4.87291 | GATGGGAACCAAAAA CCGAA TAG TTCAG GGATTGACGGAATCC TERM 57 56492 - 56506 + G 74 -10 -3.57406 | opp_overlap 56480 56489, overlap 56491 AAAGTGAGTTAACTC GCCGTA CGG TACGGC TGTTTATCATCGAAC pYV0079 55006 - 56829 + | yscC; putative type III secretion protein TERM 58 57180 - 57159 - g 73 -5.1 -4.55287 | CCCACGCAGAGAAAA GAGCCAACC GACA GGTTACCTC GTTCACGACTTGGGA pYV0080 56826 - 58085 + | yscD; putative type III secretion protein pYV0081 58082 - 58282 + | yscE; putative type III secretion protein pYV0082 58283 - 58546 + | yscF; putative type III secretion protein pYV0083 58548 - 58895 + | yscG; putative type III secretion protein pYV0084 58892 - 59389 + | yscH, yopR, lcrP; putative type III secretion protein pYV0085 59390 - 59737 + | yscI, lcrO; putative type III secretion protein pYV0086 59744 - 60478 + | yscJ, ylpB; putative type III secretion lipoprotein pYV0087 60457 - 61107 + | yscK; putative type III secretion protein pYV0088 61086 - 61718 + | type III secretion system protein pYV0089 61943 - 62290 + | yscM, lcrQ; putative type III secretion regulatory pYV0090 62838 - 63104 + | putative transposase pYV0091 63140 - 63562 + | putative transposase pYV0092 63559 - 63960 + | putative transposase TERM 59 64119 - 64140 + G 71 -8.7 -3.74693 | TTTATTATCGAGTTC GGTGACCGT CTAA ACGATCACC TTTAATACAGTGGCG pYV0093 63966 - 64145 + | putative transposase TERM 60 64293 - 64257 - T 77 -11.2 -2.85999 | opp_overlap 64256 64261, overlap 64261 TTATTCTACAGCAGA TAAACCTCAACTAA TTGCTTACT TTAGTTGAGGTTTA AAGTTTCTTTGATTG TERM 61 64261 - 64289 + T 72 -7.6 -3.78141 | opp_overlap 64257 64261, overlap 64256 TCTACAGCAGATAAA CCTCAACTAA TTGCTTACT TTAGTTGAGG TTTAAAGTTTCTTTG TERM 62 64289 - 64261 - T 76 -7.6 -4.11404 | opp_overlap 64261 64256, overlap 64257 TCTACAGCAGATAAA CCTCAACTAA TTGCTTACT TTAGTTGAGG TTTAAAGTTTCTTTG pYV0094 65772 - 64366 - | yopH; putative protein-tyrosine phosphatase Yop effector TERM 63 65361 - 65325 - G 100 -26.7 -2.54523 | CTAGATGTGAACGCA GTCCTTCACGCACCGGG GTT CCCGGTGCGTGAAGGGC TGAATGTGAATGAGA pYV0095 66153 - 66689 + | putative transposase pYV0096 66819 - 66691 - | IS630 family transposase pYV0097 66994 - 66902 - | hypothetical protein TERM 64 67167 - 67141 - R 73 -5.1 -4.65895 | opp_overlap 67142, overlap 67142 GGGGTGACGGAAAAA TCTGGGATTCC GGCGT AGAACCCCAGT TAATCTGTTTCTTCA pYV0098 68141 - 67275 - | yopP, yopJ; putative targeted effector protein pYV0099 68276 - 68142 - | hypothetical protein SEQUENCE gi|51593942|ref|NC_006154.1| Yersinia pseudotuberculosis IP 32953 plasmid pYptb32953, complete sequence (length 27702) rep 202 - 1188 + | plasmid replication protein pYptb0002 1316 - 1624 + | hypothetical protein TERM 1 1647 - 1662 + F 100 -9 -5.75599 | opp_overlap 1647 AGACAATTCTCGAAA GACAGC TTAG GCTGTC TTTTTTTATGCTTTG TERM 2 1662 - 1647 - f 75 -9 -3.58801 | opp_overlap 1647 AGACAATTCTCGAAA GACAGC TTAG GCTGTC TTTTTTTATGCTTTG pYptb0003 1910 - 2137 + | hypothetical protein TERM 3 2144 - 2157 + F 75 -5.3 -4.88067 | opp_overlap 2144 ATTAAATAAGAAAGT TTCCA TGTG TGGAA TTTTTATCACTAACT triA 2572 - 3189 + | TriA protein triB 3194 - 3487 + | TriB protein TERM 4 4219 - 4208 - g 81 -5.8 -4.91429 | AAAGCCGAAAGAAAA GGCA TGAG TGCC GGACAAAAACAGCGT TERM 5 4667 - 4655 - g 81 -7.7 -4.59511 | AAGACCGTCGAAAAA CGCTT ATC AAGCG CCGAAGATGATGCTG TERM 6 5238 - 5227 - g 91 -3.6 -5.78622 | TCATGCTAAAAAAAA GCGC TTAT GCAC GGTTGTCCTCGATAA triC 3506 - 6253 + | TriC protein TERM 7 6999 - 6984 - g 80 -2.6 -5.42164 | gap 1, overlap 6985 6986 GACAAACAACAAAAA GC-GTTT AGT AAACAGC AGTCGGAAGCGCCTA triD 6318 - 7031 + | TriD protein pYptb0008 7097 - 7348 + | antitoxin YefM pYptb0009 7345 - 7599 + | hypothetical protein pYptb0010 7718 - 7963 + | hypothetical protein TERM 8 7959 - 7946 - f 70 -3.9 -4.81551 | GATTTAGAGCAAAAA TTCAA TTCC TTGAA ATAGAGGGTTAGGTA TERM 9 8424 - 8439 + G 71 -4.6 -4.56775 | overlap 8423 8424 TATTTTCTTGATGTT CACCTC GGCG GTGGTG TTTTTAACCGCAGAT triE 7975 - 9015 + | TriE protein TERM 10 9134 - 9147 + F 70 -8.1 -3.67052 | overlap 9146 AAAAACCCGTTACCG CCGGA AATC TCCGG TTCTGTTGAGCCTAT TERM 11 9252 - 9272 + G 79 -3.2 -5.28176 | opp_overlap 9244 9238 CTATTAACACGAGAC GCCCGC GATAAGAAA GTGGGC TTTTTTATAGGTGGA triG 9186 - 9869 + | TriG protein triH 9869 - 10816 + | TriH protein triI 10813 - 12045 + | TriI protein triJ 12262 - 13275 + | TriJ protein pYptb0016 13272 - 13694 + | hypothetical protein TERM 12 14269 - 14257 - g 71 -2.6 -4.85782 | overlap 14258 GCGTTTAAAAAGAAA GGCC GTTTT GACC CGACAAAAACAGCGG pYptb0017 14071 - 14376 + | hypothetical protein TERM 13 14396 - 14427 + F 76 -10.9 -2.54523 | opp_overlap 14392 14391 14389 GAAAGTAACACTGAG GTGGCAAGGCGTA CTGCAA TACGCCTTGCCGA TCAATTCAAATATCA TERM 14 14471 - 14489 + F 95 -5.3 -5.86965 | gap 1, opp_overlap 14467, overlap 14467 GTGTTTCTAAAGCAG GCGTCCTA CTTT TAGG-CGC TTTTTTTTAATAAAT pYptb0018 14519 - 15769 + | hypothetical protein TERM 15 15778 - 15808 + F 78 -10.5 -3.27215 | opp_overlap 15783, overlap 15783 CTGGTAATTAAAGTT AAAAACAGGCGGC TATAT GCCGTCTGTTTTA TTAATATCGGAGTTT TERM 16 15803 - 15783 - f 100 -8.2 -4.83759 | opp_overlap 15778 15783 AATTAAAGTTAAAAA CAGGCGGC TATAT GCCGTCTG TTTTATTAATATCGG TERM 17 15783 - 15803 + F 100 -10.4 -4.75472 | opp_overlap 15783, overlap 15778 AATTAAAGTTAAAAA CAGGCGGC TATAT GCCGTCTG TTTTATTAATATCGG TERM 18 16032 - 16056 + G 80 -6.5 -4.67607 | TGATAAATTGTTTCT CAATGGCAT TATGAGT ATGCCGTTG TTTATTTGTTACGGG pYptb0019 15826 - 16092 + | hypothetical protein pYptb0020 16111 - 16524 + | DNA-binding protein pYptb0021 16529 - 16801 + | hypothetical protein TERM 19 16932 - 16906 - g 73 -10.1 -3.14261 | gap 1, overlap 16922 16926 GAAAAAGCCAGTGAA GCGGGGA-GGCC AACA AGCCACCCCCGC GAACGGGAGCGCCCC TERM 20 16944 - 16972 + G 93 -13.9 -3.27565 | opp_overlap 16922, overlap 16939 CCGCGAACGGGAGCG CCCCTGATGGC GGTGCAA GCCGTCAGGGG TTCGATTGTGTAGTT pYptb0022 16823 - 16996 + | hypothetical protein TERM 21 17054 - 17069 + F 70 -7.6 -3.68366 | opp_overlap 17053 TTATGCTTTAAAATT CAATCC CAAA GGATTG TTAATTTTAGAGTGG pYptb0023 17081 - 17212 + | hypothetical protein TERM 22 17256 - 17241 - g 100 -10.4 -4.7497 | opp_overlap 17240 17243, overlap 17243 CCCAGCGAGCAAAAA GCCCAC CCCA GTGGGC GGTTAATTTGGGGGG pYptb0024 17219 - 17344 + | hypothetical protein pYptb0025 17341 - 17463 + | hypothetical protein pYptb0026 17463 - 17522 + | hypothetical protein pYptb0027 17550 - 17672 + | hypothetical protein TERM 23 18119 - 18109 - f 70 -5.4 -4.56969 | AAGTTGATAAAGAAA TCCA GTT TGGA GCGTAATGTACGAAC TERM 24 18888 - 18878 - g 73 -5.4 -4.56969 | AAGTTGATAAAGAAA TCCA GTT TGGA GCGTAATGTACGAAC TERM 25 19166 - 19176 + G 71 -6.8 -4.20516 | overlap 19165 CCAAAAGATGATGAG TGGG CAC CCCA TTTATTCCGTAAAGC TERM 26 19769 - 19791 + G 71 -10.6 -2.90813 | overlap 19767 AAAGGCGTACATGTT TCGATGGCAT TTC AGGCCATCGA TGATTTACGGGACTG triK 18485 - 20266 + | TriK protein TERM 27 20830 - 20850 + G 100 -6.2 -5.63645 | gap 1, opp_overlap 20834 20838 ATTTATTGGCCCGAA CGGATGAAC TGTG GTTCA-CCG TTTTTTATGTTTTGC triL 20274 - 21014 + | TriL protein TERM 28 21501 - 21484 - g 77 -4.7 -5.00616 | opp_overlap 21496 21499 GCGGCGGCGAAAAAA GCACTGG CGAA CCTGCGC GATAATCGCGAGTTT TERM 29 21496 - 21513 + G 77 -6.3 -4.61231 | gap 1, opp_overlap 21484, overlap 21499 AAAGCACTGGCGAAC CTGCGCGA TAA TCGCG-AG TTTTTGGGCCTGTCA topB 21070 - 23232 + | DNA topoisomerase III family protein TERM 30 23308 - 23280 - f 100 -13.9 -3.27565 | opp_overlap 23305 23307, overlap 23275 AACTACACAATCGAA CCCCTGACGGC TTGCACC GCCATCAGGGG CGCTCCCGTTCTCGG pYptb0032 23291 - 23443 + | hypothetical protein TERM 31 23520 - 23534 + G 91 -2.1 -5.95539 | overlap 23512 TTTGGACAAAAAAAA CTTGT GGGTA ACAGG TTTTTTTCTTTACCG pYptb0033 23475 - 23636 + | hypothetical protein pYptb0034 23751 - 23999 + | hypothetical protein TERM 32 24002 - 24031 + T 100 -20.9 -2.6563 | opp_overlap 24009, overlap 24006 24009 TCTAGAGCTGTAACC CCAAGAACCACCC ATTA GGGTGGTTCTTGG TAAGTTATTCCGCAG TERM 33 24006 - 24027 + T 100 -14.5 -3.25169 | opp_overlap 24009, overlap 24002 24009 GAGCTGTAACCCCAA GAACCACCC ATTA GGGTGGTTC TTGGTAAGTTATTCC TERM 34 24024 - 24009 - T 82 -10.4 -3.68222 | opp_overlap 24006 24002 24009 CTGTAACCCCAAGAA CCACCC ATTA GGGTGG TTCTTGGTAAGTTAT TERM 35 24009 - 24024 + T 86 -10.4 -3.75506 | opp_overlap 24009, overlap 24006 24002 CTGTAACCCCAAGAA CCACCC ATTA GGGTGG TTCTTGGTAAGTTAT ArdC 25016 - 24036 - | antirestriction protein TERM 36 25315 - 25278 - H 95 -13.1 -3.09759 | opp_overlap 25278, overlap 25269 25302 AACACATTGACGGAA TGATTATTTACTCATAT ACTC AAATGAGTAAATAATCA TTTATTCATATTAAG TERM 37 25278 - 25315 + H 100 -13.1 -4.33153 | opp_overlap 25278 25269 25302 AACACATTGACGGAA TGATTATTTACTCATAT ACTC AAATGAGTAAATAATCA TTTATTCATATTAAG pYptb0036 25339 - 25575 + | hypothetical protein parA 25627 - 26253 + | plasmid partitioning protein pYptb0038 26274 - 26489 + | hypothetical protein pYptb0039 26513 - 26806 + | hypothetical protein TERM 38 26880 - 26833 - f 70 -5.8 -4.25104 | opp_overlap 26834 26837, overlap 26838 26840 26874 GCGGCTTTATCAAAA TCAAATATTCACTCATTTAAAT TTAA ACTCAAATGAGTGAATGATTGT TAGTTTCCTGAAAAC TERM 39 26875 - 26838 - f 83 -8.7 -4.23781 | opp_overlap 26837 26834, overlap 26833 26840 26874 TTTATCAAAATCAAA TATTCACTCATTTAAAT TTAA ACTCAAATGAGTGAATG ATTGTTAGTTTCCTG TERM 40 26873 - 26840 - f 90 -11.3 -3.71107 | opp_overlap 26837 26834, overlap 26838 26833 TATCAAAATCAAATA TTCACTCATTTAAAT TTAA ACTCAAATGAGTGAA TGATTGTTAGTTTCC pYptb0040 26953 - 27099 + | hypothetical protein pYptb0041 27120 - 27221 + | hypothetical protein TERM 41 27263 - 27249 - g 93 -7 -5.46706 | opp_overlap 27249 ATTTGAAAATAAAAA CGAGGC AAC GCCGCG TTAGTTGTTTTTGTT pYptb0042 27236 - 27382 + | hypothetical protein pYptb0043 27458 - 27580 + | hypothetical protein SEQUENCE gi|51594359|ref|NC_006155.1| Yersinia pseudotuberculosis IP 32953, complete genome (length 4744671) YPTB0001 710 - 270 - | flavodoxin asnC 1264 - 803 - | DNA-binding transcriptional regulator AsnC asnA 1434 - 2426 + | asparagine synthetase AsnA TERM 1 2454 - 2482 + T 100 -9.5 -4.84529 | ATCCCCCTATGCTAA CTCGCGATAACGG TAT CAGTCATCGCGGG TTTTTAACTTTATCA yieM 3991 - 2525 - | hypothetical protein TERM 2 3614 - 3626 + g 87 -6.9 -5.02476 | overlap 3615 CGTTTGCAGGCTATC TCCGC CTG GCGGG TTTTTTGCCAGGTCT YPTB0005 5533 - 3995 - | regulatory ATPase RavA TERM 3 4974 - 4984 + g 79 -3.2 -5.18726 | CTGATCAGCAGTGAG CGGA AAT TCTG TTTTTCTTGTACCCG TERM 4 5889 - 5910 + G 71 -3 -4.94902 | ATATTGGCACCAGCC CACTCTAT ACCTTG AGAGAGTG TTTTTCTGGTCATTA TERM 5 7241 - 7208 - g 75 -11.7 -2.72471 | gap 1, opp_overlap 7209 7211, overlap 7207 7211 GCTTCACTAGAGAAG TCACCGCCAGTACGGG TAC CCGGTAC-GGCGGTGT ATATGTCGCGAGCAA TERM 6 7209 - 7240 + G 100 -15.2 -2.98823 | gap 1, opp_overlap 7208 7207 7211, overlap 7211 CTTCACTAGAGAAGT CACCGCCAGTACGGG TAC CCGGTAC-GGCGGTG TATATGTCGCGAGCA TERM 7 7238 - 7211 - g 78 -12 -2.64051 | gap 1, opp_overlap 7209 7211, overlap 7208 7207 TCACTAGAGAAGTCA CCGCCAGTACGGG TAC CCGGTAC-GGCGG TGTATATGTCGCGAG TERM 8 7211 - 7238 + G 81 -12 -3.05022 | gap 1, opp_overlap 7211 7208 7207, overlap 7209 TCACTAGAGAAGTCA CCGCCAGTACGGG TAC CCGGTAC-GGCGG TGTATATGTCGCGAG trkD 5807 - 7675 + | potassium transport protein Kup TERM 9 7708 - 7676 - f 76 -10 -3.29211 | gap 1, opp_overlap 7680, overlap 7671 7664 7680 CAAGTGGAAATTTAA TTG-AGAGGCCGTTA ATCA TAACGGCCTCTTCTA TCATCATTCACACTA TERM 10 7680 - 7703 + F 100 -15.4 -3.57731 | opp_overlap 7680 7676 7671 7664 TGGAAATTTAATTGA GAGGCCGTTA ATCA TAACGGCCTC TTCTATCATCATTCA TERM 11 7703 - 7680 - f 100 -15.4 -2.58812 | opp_overlap 7680, overlap 7676 7671 7664 TGGAAATTTAATTGA GAGGCCGTTA ATCA TAACGGCCTC TTCTATCATCATTCA YPTB0007 7880 - 8299 + | D-ribose pyranase YPTB0008 8350 - 9276 + | ribokinase YPTB0009 9329 - 9499 + | hypothetical protein YPTB0010 10920 - 9496 - | MFS multidrug:H+ antiporter TERM 12 9694 - 9680 - G 74 -4.2 -4.92783 | overlap 9681 9687 AACCCATCATAAAAA CGCAAC ACA GTCGCA CTGATAGCAATCCCA YPTB0011 11689 - 11000 - | GntR-famly transcriptional regulator TERM 13 11575 - 11592 + g 81 -12.7 -2.6544 | overlap 11574 CCAACTCTATTTCGC CGGGCAG TATA CTGCCCG CTTCATATTCTCCTG TERM 14 14092 - 14055 - H 78 -5.7 -4.7629 | opp_overlap 14055 14049 14058, overlap 14058 TTATGAACTGAAAAA TAACGTAAAGATGACTT TACC AAGTCGTGTTTACGATA TTGCTCTTTAACAAT TERM 15 14089 - 14058 - H 78 -7.4 -4.47888 | opp_overlap 14058 14055 14049, overlap 14055 TGAACTGAAAAATAA CGTAAAGATGACTT TACC AAGTCGTGTTTACG ATATTGCTCTTTAAC TERM 16 15548 - 15530 - H 82 -10.3 -3.57798 | overlap 15543 CATAAGTAACGATAA TGCGGGT GAAAA ACCCGCA CGCCGGAAGACCAAG TERM 17 16008 - 15982 - H 70 -9.4 -2.75844 | opp_overlap 15996 16004, overlap 15981 15984 GGCGTTAGGTGAAAG GACTAGCTCCTG GAG CTGAAGCCAGTC GCAGATACCAGCTGG TERM 18 16055 - 16044 - H 74 -4.4 -5.06816 | ACTGTTTAATAAAAA CACA GCAC TGTG CAAACACGAAAGTGG TERM 19 17167 - 17177 + H 74 -6.8 -4.27316 | opp_overlap 17167 GGCTTAACCTTACAA CACC GAA GGTG TTTTGAATTGAGAGA TERM 20 17399 - 17433 + H 91 -12.9 -2.87132 | opp_overlap 17399, overlap 17406 CAGGCATCAAATAAA GCCAAGACCCCATGC CCAAA GCGTGGGGTTTTTGC TGTGTGCGAAACACA TERM 21 17433 - 17399 - H 95 -9.2 -4.50627 | opp_overlap 17399 17406 CAGGCATCAAATAAA GCCAAGACCCCATGCC CAA AGCGTGGGGTTTTTGC TGTGTGCGAAACACA TERM 22 17406 - 17426 + H 100 -10.4 -4.84527 | opp_overlap 17399, overlap 17399 CAAATAAAGCCAAGA CCCCATGC CCAAA GCGTGGGG TTTTTGCTGTGTGCG TERM 23 17492 - 17472 - H 95 -12.5 -3.35679 | opp_overlap 17472 GCGTTTTACTGATAA CCCCATGCC AAA GGCGTGGGG TTTTTGCTGTGCGCG TERM 24 17472 - 17492 + H 100 -14.7 -4.8048 | opp_overlap 17472 GCGTTTTACTGATAA CCCCATGCC AAA GGCGTGGGG TTTTTGCTGTGCGCG YPTB0012 17956 - 19143 + | putative transposase TERM 25 19139 - 19160 + T 84 -10.1 -3.74693 | TTTATTATCGAGTTC GGTGACCGC CTGA GCGATCACC TTTAATACGGTGGCA mobB 19753 - 19223 - | molybdopterin-guanine dinucleotide biosynthesis protein B TERM 26 19540 - 19554 + g 79 -10 -3.87815 | opp_overlap 19542 GTGCCCAACGGCAAT CACTGG CGA CCAGTG TTTGTAGCGCTCCAG TERM 27 19736 - 19716 - G 93 -14.1 -3.44051 | opp_overlap 19714 CCTGTACCACTATAA GCCGCTATT CCT AATAGCGGC GGTGACTTGTAGTTC YPTB0015 20495 - 20764 + | hypothetical protein YPTB0016 20855 - 21841 + | serine/threonine protein kinase dsbA 21869 - 22492 + | periplasmic protein disulfide isomerase I TERM 28 22509 - 22525 + F 100 -6.5 -6.11392 | opp_overlap 22509 22508 TTAGTACATAAAGAG GGGGC TTTTGTT GCCCC TTTTTTTATTTATTT TERM 29 23130 - 23163 + G 100 -10.5 -4.72272 | gap 1 ATGCTACGCAGTCTG CTGCTGCAATATCGAC CAA GTC-ATGTTGCAGTAG TTTTTGATGCAAAAG TERM 30 24317 - 24300 - g 83 -9.9 -4.19817 | opp_overlap 24312 GGTATCGATCTAAAA GGTATCG CTTT CGATACC ATGCTGGAGTCTTAT polA 22983 - 25781 + | DNA polymerase I TERM 31 26042 - 26012 - T 76 -11.1 -2.62184 | opp_overlap 26014 TTTGGCTGTATATTA GCCGCCCCAGTCA TTTAT TGACTGGGGCGTT TTTTATGGGGATTTT TERM 32 26014 - 26040 + T 100 -18.1 -5.25803 | opp_overlap 26012 TGGCTGTATATTAGC CGCCCCAGTCA TTTAT TGACTGGGGCG TTTTTTATGGGGATT YPTB0019 26839 - 26189 - | GTPase EngB TERM 33 27405 - 27457 + H 100 -13.6 -3.99405 | gap 1, opp_overlap 27395 27420, overlap 27420 GGATATCCTTCCGCA GAAG-GTGCGAAAAAAGGCGACAGG TTAA CCTGCCGCCTTTTTTCTTTCTCTTC TTTCTGCTAGATTCC TERM 34 27441 - 27420 - H 100 -13.7 -5.03145 | opp_overlap 27420 27405 GAAGGTGCGAAAAAA GGCGACAGG TTAA CCTGCCGCC TTTTTTCTTTCTCTT TERM 35 27420 - 27441 + H 100 -11.5 -5.7827 | opp_overlap 27420, overlap 27405 GAAGGTGCGAAAAAA GGCGACAGG TTAA CCTGCCGCC TTTTTTCTTTCTCTT YPTB0020 27604 - 28170 + | hypothetical protein TERM 36 29153 - 29127 - g 71 -8.6 -3.70102 | opp_overlap 29126 ACGTAAAATCAAAGA CGCTGATCTGCC AAC GGCGGAGCAACG GTTGGATATTTTGCA hemN 28357 - 29730 + | coproporphyrinogen III oxidase TERM 37 29769 - 29736 - T 83 -11.8 -2.80994 | gap 1, opp_overlap 29740 29747 TGTAATCTGACGATA TCACCCTC-AGTGCG GTTAT CGCTCTTGAGGGTGA CCATCTGGCGGGAAC glnG 31196 - 29784 - | nitrogen regulation protein NR(I) TERM 38 30166 - 30177 + g 74 -4.4 -4.98531 | overlap 30173 AGCGCCGCTTCGGTC TCTG GATG CAGA TTTTTGCTTTCCACG glnL 32253 - 31204 - | nitrogen regulation protein NR(II) TERM 39 32405 - 32388 - R 100 -11.3 -5.28826 | AAAGTGGAGAAAAAA GCCCATC CTAA GATGGGC CAAAAGTTTCCACGG glnA 33915 - 32506 - | glutamine synthetase TERM 40 33128 - 33138 + g 71 -6.8 -4.13945 | CCTGAGCCGTTATCG CCGA ACA TCGG TTTTGGCATAAAGGT TERM 41 34238 - 34211 - H 70 -7.8 -3.57561 | gap 1, opp_overlap 34211 TGCCAACTTTCCAAA CCCCCCAT-TTAT GCC ATATCATGGGGGG TCTGCTGATAATCAG bipA 34478 - 36301 + | putative GTPase TERM 42 36323 - 36347 + F 100 -14.3 -3.75738 | TTTGCATTGTTGATA CTTAGGGCGCT CAA GGCGCCCTGAG TTCTTACTCCTCCTA YPTB0026 36623 - 37213 + | phosphatase rbn 37310 - 38194 + | ribonuclease BN YPTB0028 38201 - 38638 + | D-tyrosyl-tRNA deacylase YPTB0029 38824 - 39747 + | hypothetical protein TERM 43 39786 - 39767 - T 79 -8.6 -4.11216 | opp_overlap 39767 CTGGTACCCTTAAAA TCACTGAC ATGA GCCAGTGA TTTGCCGTCGGATGA YPTB0030 41591 - 39882 - | hypothetical protein TERM 44 41712 - 41687 - R 100 -6.9 -5.67063 | gap 1, opp_overlap 41687 CGGACCATAAAAAAA TGGCCGG-CATC ATT AATGACCGACCA TTTCAGTGATGTGTT YPTB0031 43123 - 41738 - | NCS2 family xanthine/uracil:H+ symporter TERM 45 42193 - 42205 + g 76 -9.1 -3.88498 | opp_overlap 42192 CATTGGCCAGTACAC CGCCT TTT AGGCG TTTCATATATAACGG TERM 46 42746 - 42767 + g 71 -2.9 -5.00616 | CAGCGCCGCCATCAT CGTTGGG ATATCCGC CCCACCG TTTTTTAGCGCCAGC gltS 43361 - 44575 + | sodium/glutamate symport carrier protein TERM 47 44679 - 44664 - T 78 -9 -3.81146 | GCTGGGAATTAAGAA GCCTCA TGAA TGAGGC TGAGGTTATTGACAA TERM 48 44758 - 44784 + T 72 -7.2 -3.9749 | gap 1, opp_overlap 44746, overlap 44757 CATCCATGTAGGCTC GAG-CCGCGCC CTCCCT GGCGCGGACGC TTTACTCTTCTGCCT recG 47022 - 44941 - | ATP-dependent DNA helicase RecG trmH 47715 - 47023 - | tRNA guanosine-2'-O-methyltransferase TERM 49 47334 - 47348 + g 77 -4.2 -5.14563 | CCAGTGCCAGCGCTT CTGGTG AAA TACCGG TTTTTTCCTGACCCA spoT 49829 - 47721 - | bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase TERM 50 48629 - 48607 - G 75 -7.6 -4.28977 | opp_overlap 48607, overlap 48608 ACAACATAGGCAAAA TCGACCGGTG TGG CACCAGCCGG TAATTCCACAATGCG TERM 51 48628 - 48608 - G 76 -11.1 -3.16302 | opp_overlap 48607, overlap 48607 CAACATAGGCAAAAT CGACCGGTG TGG CACCAGCCG GTAATTCCACAATGC TERM 52 49273 - 49291 + g 73 -4.5 -4.68593 | opp_overlap 49273 TAGAGTGCTTCAAAA CCCAGCT CTTCC AGCTCGG TTTTTAAATGATGAA rpoZ 50124 - 49849 - | DNA-directed RNA polymerase subunit omega gmk 50802 - 50179 - | guanylate kinase TERM 53 50735 - 50747 + g 71 -9.1 -3.54408 | opp_overlap 50735, overlap 50731 TGTGTTTTTAACAAA GCCTG AAT CAGGC TTGATTTCCCTGCCC TERM 54 50747 - 50735 - G 80 -9.1 -4.15044 | opp_overlap 50731 50735 TGTGTTTTTAACAAA GCCTG AAT CAGGC TTGATTTCCCTGCCC TERM 55 51569 - 51546 - g 71 -7.4 -4.02206 | gap 1 AACTCAAAGATGAAA CCGCCCT-CAC GAG GTGGATGGCGG GGCGGAAAAATCTCT TERM 56 52456 - 52468 + G 73 -3.3 -4.8543 | ACGCTTACCACATGG CTGTG AAC CTCAG TTTTTATCCCGCTTG ligB 51203 - 52906 + | NAD-dependent DNA ligase LigB YPTB0039 53543 - 52926 - | hypothetical protein TERM 57 53471 - 53450 - G 71 -7.3 -4.10566 | AGGCAATAATAATAA CGCCAAACA TATC CATTTGGCG GCGACCCGCAGCCAG TERM 58 54000 - 54031 + r 100 -15.9 -5.5208 | opp_overlap 54003 54007 GGCTTTTCCTGCGAA CCAGCAAGCCCGC AGATTA GCGAGCTTGCTGG TTTTTTGTGTTCTGG TERM 59 54028 - 54003 - R 88 -12.6 -2.70932 | opp_overlap 54000, overlap 54007 TTTTCCTGCGAACCA GCAAGCCCGC AGATTA GCGAGCTTGC TGGTTTTTTGTGTTC YPTB0040 54927 - 54064 - | hypothetical protein rph 55054 - 55770 + | ribonuclease PH TERM 60 55779 - 55795 + F 100 -9.4 -5.41143 | opp_overlap 55776 ATCATAAATTTATTA GGCGAC GGATA GTCGCC TTTTTTTACCCGCTA pyrE 55937 - 56584 + | orotate phosphoribosyltransferase TERM 61 56611 - 56668 + T 100 -21.6 -3.68569 | gap 1, opp_overlap 56602 56621, overlap 56612 56613 56633 ATAACATGGGGTAAT C-CCGAATCAAGCTACGCCAAGAGGGC CGTTT GCCCTTTTTGCGTAGCTTGATTCGCTG TTCTCTCTATGTCTT TERM 62 56612 - 56666 + T 100 -25.3 -3.40967 | opp_overlap 56602 56621, overlap 56611 56613 56633 TAACATGGGGTAATC CCGAATCAAGCTACGCCAAGAGGGC CGTTT GCCCTTTTTGCGTAGCTTGATTCGC TGTTCTCTCTATGTC TERM 63 56613 - 56665 + T 100 -28.8 -2.63857 | opp_overlap 56602 56621, overlap 56612 56611 56633 AACATGGGGTAATCC CGAATCAAGCTACGCCAAGAGGGC CGTTT GCCCTTTTTGCGTAGCTTGATTCG CTGTTCTCTCTATGT TERM 64 56657 - 56621 - T 100 -15.2 -3.35867 | opp_overlap 56613 56612 56611 56633 GTAATCCCGAATCAA GCTACGCCAAGAGGGC CGTTT GCCCTTTTTGCGTAGC TTGATTCGCTGTTCT TERM 65 56633 - 56645 + T 77 -6.2 -4.68424 | opp_overlap 56621, overlap 56613 56612 56611 CAAGCTACGCCAAGA GGGC CGTTT GCCC TTTTTGCGTAGCTTG slmA 57315 - 56719 - | nucleoid occlusion protein TERM 66 56849 - 56884 + g 71 -4 -4.82901 | opp_overlap 56848, overlap 56848 56849 TGGGTGGCCAGTAAC GCTTCATCATGGATAA AGCC TTGTCCATCACGCAGC TTTTTCTCACGAAGG TERM 67 57052 - 57069 + g 77 -4.8 -4.90906 | CAGCAGGATTAAGCG GAGGCG ATTAAA CGTCTC TTTTTCATCTTGTAG TERM 68 57368 - 57395 + r 91 -12 -3.56562 | gap 1, opp_overlap 57363 AAAACCCAAACACCG GCCGCTCTGGGAA CAA TGCCCAG-GCGGC TTATGTGATAGCTTT dut 57892 - 57437 - | deoxyuridine 5'-triphosphate nucleotidohydrolase dfp 59087 - 57873 - | bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase TERM 69 58918 - 58907 - G 71 -7.2 -4.04209 | GCAAATCATCAGAAA CGGG ATAG CCCG AGACTGCCTGTAGCG radC 59284 - 59952 + | DNA repair protein RadC rpmB 60215 - 60451 + | 50S ribosomal protein L28 rpmG 60463 - 60630 + | 50S ribosomal protein L33 TERM 70 60637 - 60616 - f 83 -8.9 -4.07877 | GTACTCTATAAAGAA GCTAAAATT AAGT AATTTTAGC GGACTAAGAAAAACC TERM 71 60672 - 60645 - f 95 -12.8 -3.16683 | opp_overlap 60651, overlap 60651 ATTTTAGCGGACTAA GAAAAACCCGGC CTTG GCCGGGTTTTTT ATTATATAAAGTACA TERM 72 60651 - 60666 + F 100 -11.8 -5.60689 | opp_overlap 60651 60645 GCGGACTAAGAAAAA CCCGGC CTTG GCCGGG TTTTTTATTATATAA TERM 73 60666 - 60651 - f 100 -11.8 -5.1356 | opp_overlap 60651, overlap 60645 GCGGACTAAGAAAAA CCCGGC CTTG GCCGGG TTTTTTATTATATAA mutM 60713 - 61522 + | formamidopyrimidine-DNA glycosylase coaD 62007 - 61528 - | phosphopantetheine adenylyltransferase kdtX 62786 - 62004 - | lipopolysaccharide core biosynthesis glycosyl transferase kdtA 64064 - 62787 - | 3-deoxy-D-manno-octulosonic-acid transferase rfaC 65449 - 64484 - | ADP-heptose:LPS heptosyl transferase I rfaF 66513 - 65449 - | ADP-heptose:LPS heptosyltransferase II rfaD 67476 - 66544 - | ADP-L-glycero-D-mannoheptose-6-epimerase kbl 67722 - 68933 + | 2-amino-3-ketobutyrate coenzyme A ligase tdh 68943 - 69968 + | L-threonine 3-dehydrogenase TERM 74 69981 - 70021 + T 86 -11.3 -3.3506 | opp_overlap 70019, overlap 69974 TAGTTTATCCCCTTC GGGCTTGGTGTTGCA AAACTACCCGC TGCGATACCAAGCCC TTGTCAGGATTTACG yibQ 71116 - 70106 - | hypothetical protein TERM 75 70688 - 70676 - G 70 -7.7 -3.79687 | overlap 70674 70679 ACTGTCGAGAAAATA GAGCT GGT AGCTC CCCAGTGCCTGCATC YPTB0059 72510 - 71140 - | hypothetical protein TERM 76 71383 - 71397 + g 76 -10 -3.76952 | opp_overlap 71382 71379, overlap 71390 AGCCAGTAAAACACG GCCATC GGC GATGGC TTTGACTTCGCTGCC TERM 77 72220 - 72234 + g 93 -2.1 -6.13503 | TTTTAGTTGATCCAG CAATG AACTG CGTTG TTTTTTTTGTTGCTG TERM 78 72463 - 72421 - G 82 -12.1 -3.11634 | opp_overlap 72450, overlap 72425 CGGTAGACGACTCAA CTTATCTGACAGCAGAGAG GGAGA CTCTCTACCGTCAGAGACG GCATCTTTCGTAGTT TERM 79 72459 - 72425 - G 100 -15.9 -2.55722 | opp_overlap 72450, overlap 72421 AGACGACTCAACTTA TCTGACAGCAGAGAG GGAGA CTCTCTACCGTCAGA GACGGCATCTTTCGT YPTB0060 74067 - 72520 - | phosphoglyceromutase TERM 80 72684 - 72713 + g 71 -8.6 -3.74747 | gap 1 GGCTGGTATGGGCGG TGTGTG-CCTGGC CAGTT GCCGGGTCACGCA TTTGCTCAGCGTTGC TERM 81 73060 - 73085 + g 73 -5.4 -4.51097 | overlap 73049 GACGTGAGCATATTT CTCAGTTTCG GAAATG CGTAACTGGG TTTTATCATGCTTCA TERM 82 73646 - 73634 - G 74 -9.1 -3.6269 | opp_overlap 73633 73634, overlap 73632 GCATGCAGATAAATA GCGGT TGC ACCGC GTTTAGCCGCCAGCT YPTB0061 74465 - 74899 + | hypothetical protein grxC 75018 - 75266 + | glutaredoxin 3 TERM 83 75241 - 75261 + F 82 -10.4 -3.68827 | ACGCCCTGGATGCGC GCGGTGGG CTAGA CCCACTGC TTTAACTCGTCAGTG secB 75354 - 75830 + | preprotein translocase subunit SecB TERM 84 76423 - 76451 + G 71 -10.4 -2.77781 | gap 1, overlap 76419 76443 AGTGAAAAACGTGAT TGCCATCGGTGCA GGTA TGT-CCGATGGCA TCGGTTTTGGTGCGA TERM 85 76443 - 76455 + G 75 -7.7 -4.26076 | overlap 76423 76419 TCGGTGCAGGTATGT CCGAT GGC ATCGG TTTTGGTGCGAATGC gpsA 75830 - 76849 + | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase YPTB0065 76909 - 77049 + | hypothetical protein cysE 77115 - 77936 + | serine acetyltransferase YPTB0067 78547 - 78059 - | putative methyltransferase TERM 86 79054 - 79064 + G 79 -2.4 -5.50723 | TTGGCAGCTCAACTG GGGC TTA GCAC TTTTTATTTTCATCG YPTB0068 78736 - 79800 + | bifunctional regulatory protein/DNA repair protein TERM 87 79837 - 79810 - T 83 -11.4 -3.04461 | gap 1, opp_overlap 79804 CACTGATTCTCAATA TCTGCCCGAACCA CAT TGAT-CGGGCAGA TAGACATTGATCGGG cpxA 81244 - 79868 - | two-component sensor protein TERM 88 80007 - 80020 + g 73 -9.5 -3.32498 | CCTGTTCCTCCCGAC GCCCG ATCT CGGGC TTCATCTGTACGATA TERM 89 80246 - 80220 - G 71 -4.2 -4.80453 | overlap 80221 GGATTACAAAATAAA GGCCATGGCCCC GGA GGTGCCGTGACT ACCAGCGTTTTACCC cpxR 81939 - 81241 - | DNA-binding transcriptional regulator CpxR TERM 90 82257 - 82242 - g 77 -6.8 -4.49316 | ATGATGAACAAGAAA GGCGAC CGCG GTCACC ATAACATGTTTGATG cpxP 82113 - 82601 + | periplasmic stress adaptor protein CpxP TERM 91 82658 - 82676 + F 100 -14.6 -5.71638 | CCATCCCTGTCTTTC GCCCTCCA TGA TGGAGGGC TTTTTTTGCTTATTG YPTB0072 83279 - 84238 + | hypothetical protein TERM 92 84523 - 84501 - f 74 -7 -4.2535 | AGACCATAGTGAAAA CGGCGGAATA CGG TATTCCACAG ACCAGAAATTCTCTG fieF 84800 - 85702 + | ferrous iron efflux protein F pfkA 85920 - 86903 + | 6-phosphofructokinase TERM 93 86928 - 86980 + F 100 -13.1 -4.98531 | gap 3, opp_overlap 86939 TCGCTCGTTCGGCAA GCCCTCGAAAT-TGAACTGATCCCAA AAAG TTGGG--CAGTTCACATTGCGAGGGC TTTTTACTTTCAGCC sbp1 87124 - 88113 + | sulfate transporter subunit TERM 94 88241 - 88278 + T 77 -8.5 -3.91897 | gap 1, opp_overlap 88249 TACCAACCGCTTTAT CG-CCAACACCACATCGT TGT ATGTTGTGGTGTTGAACG TTTATCGCTACCGCG YPTB0076 89139 - 88363 - | molybdate ABC transporter periplasmic-binding protein TERM 95 89212 - 89176 - R 71 -8.8 -3.39908 | gap 1, opp_overlap 89207, overlap 89174 89172 89177 TTGCGCCAAAAGACA GGCCACCGAAAAC-AGG ATGA CCTTGTCTTCAGTGGCT AAGCGACGTTTAAAT TERM 96 89211 - 89177 - R 88 -12.3 -2.63623 | gap 1, opp_overlap 89207, overlap 89176 89174 89172 TGCGCCAAAAGACAG GCCACCGAAAAC-AGG ATGA CCTTGTCTTCAGTGGC TAAGCGACGTTTAAA YPTB0077 90684 - 89257 - | DASS family 2-oxoglutarate/malate:Na+ antiporter YPTB0078 91463 - 90750 - | hypothetical protein TERM 97 91183 - 91173 - G 87 -6.8 -5.15634 | CAGGTCACCAAAAAA GCCA TCA TGGC ATTCGGAGGTCGGCG YPTB0079 92197 - 91460 - | hypothetical protein YPTB0080 92334 - 93569 + | transcriptional regulator TERM 98 93762 - 93741 - T 84 -6.5 -5.03994 | opp_overlap 93735 93733 93741, overlap 93735 TTGGATATATAAAAA CCGGCGC TTTTATTT ACGCCGG TTTTTGTGTTGTACC TERM 99 93741 - 93762 + T 85 -5.8 -5.1523 | opp_overlap 93741 93735, overlap 93735 93733 TTGGATATATAAAAA CCGGCG CTTTTATTTA CGCCGG TTTTTGTGTTGTACC tpiA 94567 - 93800 - | triosephosphate isomerase TERM 100 94625 - 94611 - R 73 -10 -3.03309 | opp_overlap 94611, overlap 94608 GGTCAATAATAATGA CTGCCT GAC AGGCAG TTTACCTGTCCAACA TERM 101 94611 - 94625 + r 80 -10 -3.70902 | opp_overlap 94611 94608 GGTCAATAATAATGA CTGCCT GAC AGGCAG TTTACCTGTCCAACA YPTB0082 95331 - 94696 - | hypothetical protein YPTB0083 95479 - 95913 + | hypothetical protein fpr 97000 - 96254 - | ferredoxin-NADP reductase TERM 102 97131 - 97102 - R 70 -7.8 -3.68619 | TCTAACTGATGTAAA CTTTACGGCGCT TTTACG AGCGCCGTGCAG AATAAAAATGATTGC glpX 98165 - 97155 - | fructose 1,6-bisphosphatase II TERM 103 97417 - 97431 + g 74 -9.2 -3.70446 | overlap 97418 CGTAATAACTCTTGT TCGCCG ATG CGGCGG TTATCTTCACTGTCG TERM 104 97418 - 97430 + g 71 -10.5 -2.81786 | overlap 97417 GTAATAACTCTTGTT CGCCG ATG CGGCG GTTATCTTCACTGTC TERM 105 98327 - 98305 - R 100 -11.3 -4.93365 | opp_overlap 98300 98305 TCTCACAACGAAAAA CGCGCCATC GGGGG GATAGCGCG TTGTGTTTGGTTTAA TERM 106 98305 - 98327 + r 80 -9.1 -3.93578 | opp_overlap 98305, overlap 98300 TCTCACAACGAAAAA CGCGCCATC GGGGG GATAGCGCG TTGTGTTTGGTTTAA glpK 99941 - 98418 - | glycerol kinase TERM 107 98448 - 98459 + g 75 -3.6 -5.01732 | TTCCCAATCCCGGGC GCGG GCCA CTGC TTTTTTCCAGCCCTT TERM 108 99125 - 99135 + g 82 -5.4 -5.0538 | GCAGGAAGCAACCCG TACC GTA GGTA TTTTTTGCCATGCCC glpF 100966 - 100118 - | MIP family glycerol uptake facilitator protein GlpF YPTB0088 101215 - 100976 - | hypothetical protein YPTB0089 101610 - 101849 + | hypothetical protein TERM 109 101980 - 101951 - T 100 -13.7 -4.44046 | opp_overlap 101956 GTCAGCGGAAATAAA GTAAAGGGCGATA TCAG TATCGCCCTTTTC TGTGGGTGCGCCGAT TERM 110 101956 - 101975 + T 100 -12.2 -4.55287 | opp_overlap 101951 CGGAAATAAAGTAAA GGGCGATA TCAG TATCGCCC TTTTCTGTGGGTGCG YPTB0090 104304 - 102190 - | ABC transporter permease/ATP-binding protein YPTB0091 105589 - 104297 - | HlyD family (ABC transporter associated) multidrug efflux pump YPTB0092 105802 - 106041 + | hypothetical protein TERM 111 106050 - 106075 + F 100 -14.1 -3.33815 | opp_overlap 106050 GCAGTAATAAGTAAA TATGCCAGCGT GAAA GCGCTGGCATA TTAATTGAAAGGGAT TERM 112 106075 - 106050 - f 100 -13.4 -4.09805 | opp_overlap 106050 GCAGTAATAAGTAAA TATGCCAGCG TGAAAG CGCTGGCATA TTAATTGAAAGGGAT YPTB0093 106216 - 106365 + | hypothetical protein YPTB0094 106671 - 107255 + | hypothetical protein menG 107857 - 107372 - | ribonuclease activity regulator protein RraA menA 108916 - 107999 - | 1,4-dihydroxy-2-naphthoate octaprenyltransferase TERM 113 108874 - 108897 + g 91 -13.2 -3.27029 | overlap 108868 108873 108872 GTGGTCGTAGGCTTT CCAGCCAAGC CTGG GTTTGGCTGG TGTTGATTGATAGGC TERM 114 109045 - 109023 - R 70 -2.8 -5.06451 | TATCATGTCAAAAAA TTATGACGTT ATC AAAATCATAA TGCGATAAGAATCAT TERM 115 109104 - 109074 - R 100 -15.4 -4.9934 | overlap 109076 109077 109079 ATAATACGATAAAAA CAGGAGTGGGAGGC GAT GCCTCCCACTCGGG ATACTCCATATGGAT TERM 116 109102 - 109076 - R 100 -16.6 -4.10552 | overlap 109074 109077 109079 AATACGATAAAAACA GGAGTGGGAGGC GAT GCCTCCCACTCG GGATACTCCATATGG TERM 117 109101 - 109077 - R 100 -20.1 -3.04705 | overlap 109076 109074 109079 ATACGATAAAAACAG GAGTGGGAGGC GAT GCCTCCCACTC GGGATACTCCATATG TERM 118 109099 - 109079 - R 100 -16.9 -3.0648 | overlap 109077 109076 109074 ACGATAAAAACAGGA GTGGGAGGC GAT GCCTCCCAC TCGGGATACTCCATA hslU 110482 - 109151 - | ATP-dependent protease ATP-binding subunit hslV 111077 - 110553 - | ATP-dependent protease peptidase subunit ftsN 112022 - 111177 - | cell division protein FtsN cytR 113116 - 112088 - | DNA-binding transcriptional regulator CytR TERM 119 113385 - 113338 - R 78 -5.6 -4.85918 | GATCAGACAATAAAA GATCGGGCGAACCCCTTT TTCTTGACGCTG CAAGGGGTTCGCCATATC CCCTCACCTGAATCA priA 115667 - 113469 - | primosome assembly protein PriA TERM 120 115819 - 115852 + H 90 -11.2 -3.94409 | opp_overlap 115825, overlap 115822 GATATCAAATCCTGT TAACCATCGTTGCT TATTTT ATCAACGATGGTTA TTTATCAATCGTGTG TERM 121 115822 - 115849 + H 79 -8.5 -4.09519 | opp_overlap 115825, overlap 115819 ATCAAATCCTGTTAA CCATCGTTGCT TATTTT ATCAACGATGG TTATTTATCAATCGT rpmE 115920 - 116135 + | 50S ribosomal protein L31 TERM 122 116171 - 116157 - T 100 -12.8 -4.96848 | opp_overlap 116157 CCCGTCAGATAAAAA GGCGCC TTG GGCGCC TTTTTTGTTGCCACT TERM 123 116157 - 116171 + T 100 -12.8 -5.45652 | opp_overlap 116157 CCCGTCAGATAAAAA GGCGCC TTG GGCGCC TTTTTTGTTGCCACT TERM 124 116540 - 116568 + T 79 -3.1 -5.31275 | opp_overlap 116540 TGCGTAAAGAAAAAA TGGCTAAGCACAA TTG TTATGCTGAACCA TTTTTTGTAGTGAAA TERM 125 116568 - 116540 - T 100 -7.5 -5.63517 | opp_overlap 116540 TGCGTAAAGAAAAAA TGGCTAAGCACAA TTG TTATGCTGAACCA TTTTTTGTAGTGAAA TERM 126 116656 - 116621 - T 74 -4.8 -4.74801 | overlap 116604 116603 116623 116627 TAACTGCAGTAAAAA TATTAACTGCAGTGAA AAGG TTAACTGCAGTGAAAA GGTTAATTGTAGCGA TERM 127 116654 - 116623 - T 72 -7.4 -3.98658 | overlap 116604 116603 116621 116627 ACTGCAGTAAAAATA TTAACTGCAGTGAA AAGG TTAACTGCAGTGAA AAGGTTAATTGTAGC TERM 128 116650 - 116627 - T 73 -8.2 -3.62531 | overlap 116604 116603 116623 116621 CAGTAAAAATATTAA CTGCAGTGAA AAGG TTAACTGCAG TGAAAAGGTTAATTG YPTB0103 117132 - 116677 - | hypothetical protein metJ 117798 - 117481 - | transcriptional repressor protein MetJ metB 118176 - 119336 + | cystathionine gamma-synthase TERM 129 120874 - 120892 + G 85 -10.3 -4.08767 | TTACGATGGTTTGGA TGCCAGC CGGAC GCTGGCA TTTTACAACGATGAA metL 119339 - 121774 + | bifunctional aspartate kinase II/homoserine dehydrogenase II metF 122007 - 122891 + | 5,10-methylenetetrahydrofolate reductase TERM 130 123058 - 123036 - T 71 -9 -3.30159 | overlap 123019 123018 CCAATGGGGCCATAA GCGTGGCCCC CTT GGAACCCCGC GCTTTCGCACTATCG TERM 131 123314 - 123347 + T 87 -5.5 -5.47399 | opp_overlap 123314 TTTAAGGTCAAAGAC CAATTCAAAATCT AAAGAAGA GGGTTTTGAATTG TTTTTTTGACGTTGA TERM 132 123457 - 123429 - T 93 -11 -4.1899 | gap 1 GGACGCCAGCGAAAA GCGCGCTTGGGCA GGGA TGCCC-ATCGCGC TGGCTCGTCAGCCCG TERM 133 123524 - 123549 + T 100 -16.2 -2.52543 | GCGCAAGCCGCAGGT GCAGGAGGGC CGGCTA GCCCTCCTGC TCGGTTGAGGCGACT ppc 126356 - 123720 - | phosphoenolpyruvate carboxylase argE 127899 - 126730 - | acetylornithine deacetylase argC 128144 - 129148 + | N-acetyl-gamma-glutamyl-phosphate reductase argB 129331 - 130104 + | acetylglutamate kinase TERM 134 131139 - 131125 - g 89 -5.7 -5.24796 | overlap 131127 131129 GCCACAGAAGAAAAA TCCAG ATGCG CTGGA GCTCATCCGTGGTAA TERM 135 131598 - 131582 - g 71 -9.3 -3.5594 | opp_overlap 131573 131577 131593, overlap 131583 AAGCGAGTGGCCAAA GGCGGCG TTT CGCCGCA GCAGGTTGCATCGGC TERM 136 131597 - 131583 - g 81 -12.8 -2.73243 | opp_overlap 131573 131577 131593, overlap 131582 AGCGAGTGGCCAAAG GCGGCG TTT CGCCGC AGCAGGTTGCATCGG argH 130271 - 131644 + | argininosuccinate lyase TERM 137 131702 - 131669 - f 76 -10.1 -3.33261 | opp_overlap 131673 TTTTAATCTTGAGAA CGGGGCGGGCCGCTA ATTG CAGCGGCCCGCTTTG CATTAACAGTTATTA TERM 138 131673 - 131698 + F 100 -17.6 -3.75897 | opp_overlap 131669 AATCTTGAGAACGGG GCGGGCCGCT AATTGC AGCGGCCCGC TTTGCATTAACAGTT TERM 139 132294 - 132274 - g 70 -2 -4.92669 | opp_overlap 132293, overlap 132293 GAGATAAAAAAACAA TAATTTCA GTGAA TAAAATTA CAACTTGTATATTAT TERM 140 134037 - 134047 + G 71 -6.8 -4.25256 | GACGATCACTTTGCC GCGA AGG TCGC TTATTTTGATACCCG YPTB0113 132243 - 134735 + | putative TonB dependent receptor protein TERM 141 134836 - 134803 - f 100 -18.3 -4.26351 | overlap 134804 CAGCAAGTGAATAAA TCCCGCATCATTGAC GGCA GTCAATGATGCGGGT GAGAGAACACAGCTA TERM 142 134835 - 134804 - f 100 -21.8 -3.15087 | overlap 134803 AGCAAGTGAATAAAT CCCGCATCATTGAC GGCA GTCAATGATGCGGG TGAGAGAACACAGCT TERM 143 134926 - 134905 - f 75 -10.3 -2.75712 | opp_overlap 134907, overlap 134902 134907 TCACTTATGGAACCA CATGGATTA ATAA TAATCCATG TTCACCGTAACAATT HasA 134963 - 135580 + | extracellular heme acquisition hemophore HasA TERM 144 135611 - 135587 - f 100 -13.7 -5.06414 | opp_overlap 135585 135606 GCCGCTTAAGAAAAA CAGCCAGAAAA TAA CTTTCTGGCTG AGTCATTGATACCAC YPTB0115 135746 - 137554 + | ABC transporter permease/ATP-binding protein YPTB0116 137630 - 138958 + | HlyD family secretion protein YPTB0117 139023 - 139826 + | putative tonB protein TERM 145 139923 - 139907 - T 100 -10.8 -4.7254 | opp_overlap 139907 ACGGGGGATTAAAAA CCGGGC GTCGT GCCCGG TTTGAACCGCCTGAG TERM 146 139907 - 139923 + T 89 -11.5 -3.53811 | opp_overlap 139907 ACGGGGGATTAAAAA CCGGGCG TCG TGCCCGG TTTGAACCGCCTGAG YPTB0118 141405 - 139942 - | dihydrolipoamide dehydrogenase TERM 147 140880 - 140862 - G 80 -7.4 -4.56597 | CGCCTGGGCCAAAAA CTGCCACA GAT TCTGGCAG ATCGTCCCAATTAAA TERM 148 141445 - 141428 - R 100 -11.3 -5.80817 | opp_overlap 141426 CCTAACAGAAAAAAA GGTAGGC CGGA GCCTACC AAGTTACTTCCTATT YPTB0119 142230 - 141499 - | putative peroxiredoxin/glutaredoxin family protein TERM 149 141791 - 141781 - G 71 -8.2 -3.65693 | opp_overlap 141781 141780 141777 ATCAGATACTTCAAA CGGG TCG CCCG GTTTGTTTGGCTCGA TERM 150 141795 - 141812 + g 80 -4.2 -5.24129 | overlap 141777 ACGGGTCGCCCGGTT TGTTTG GCTCGA CAAACA TTTTTTCTACCACGC oxyR 142377 - 143294 + | DNA-binding transcriptional regulator OxyR sthA 144677 - 143277 - | soluble pyridine nucleotide transhydrogenase trmA 144883 - 145530 + | DNA-binding transcriptional repressor FabR yijD 145543 - 145950 + | hypothetical protein TERM 151 146036 - 146054 + T 100 -10.3 -4.83243 | opp_overlap 146036, overlap 146021 CGTCTTGCCAACTAA GGGCAAC ATGTC GTTGCCC TTTCTTTTATCTGCG TERM 152 146054 - 146036 - T 81 -11 -3.33696 | opp_overlap 146021 146036 CGTCTTGCCAACTAA GGGCAACA TGT CGTTGCCC TTTCTTTTATCTGCG TERM 153 146082 - 146092 + T 76 -6.8 -4.57569 | GCGGTATGAATTATT CGTC AGT GACG TTTTTCCAGCAGTAC trmA 147187 - 146084 - | tRNA (uracil-5-)-methyltransferase TERM 154 148310 - 148298 - gH 73 -9.1 -3.46068 | overlap 148296 TTGCCAAGGGAAATA CTGGC ATG GCCAG TCAGCCAGATCGTGA btuB 147667 - 149541 + | vitamin B12/cobalamin outer membrane transporter TERM 155 149638 - 149612 - gf 100 -18.2 -3.14132 | opp_overlap 149609 149606 CTGTCTGTCTATCAA GAGATTCGGCAA CTG TTGCCGAATCTC CACTATATATATGCT TERM 156 150102 - 150114 + GF 72 -7.7 -3.76775 | opp_overlap 150101 150098 CGGATACTATAGTAT TGGGT TGC ACCCA TTTCCCTCTATTAAC murI 149486 - 150349 + | glutamate racemase TERM 157 152649 - 152612 - f 78 -5.7 -4.7629 | opp_overlap 152612 152606 152615, overlap 152615 TTATGAACTGAAAAA TAACGTAAAGATGACTT TACC AAGTCGTGTTTACGATA TTGCTCTTTAACAAT TERM 158 152646 - 152615 - f 78 -7.4 -4.47888 | opp_overlap 152612 152606 152615, overlap 152612 TGAACTGAAAAATAA CGTAAAGATGACTT TACC AAGTCGTGTTTACG ATATTGCTCTTTAAC TERM 159 154105 - 154087 - f 82 -10.3 -3.57798 | overlap 154100 CATAAGTAACGATAA TGCGGGT GAAAA ACCCGCA CGCCGGAAGACCAAG TERM 160 154565 - 154539 - f 70 -9.4 -2.75844 | opp_overlap 154553 154561, overlap 154538 154541 GGCGTTAGGTGAAAG GACTAGCTCCTG GAG CTGAAGCCAGTC GCAGATACCAGCTGG TERM 161 154612 - 154601 - f 74 -4.4 -5.06816 | ACTGTTTAATAAAAA CACA GCAC TGTG CAAACACGAAAGTGG TERM 162 155724 - 155734 + F 74 -6.8 -4.27316 | opp_overlap 155724 GGCTTAACCTTACAA CACC GAA GGTG TTTTGAATTGAGAGA TERM 163 156241 - 156260 + F 100 -11.4 -5.80951 | opp_overlap 156241 CTGCCAGATAAAAAA CCCTTCGC GAAA GCGAGGGG TTTTTTATTTTAAGT TERM 164 156260 - 156241 - f 100 -9.2 -5.36441 | opp_overlap 156241 CTGCCAGATAAAAAA CCCTTCGC GAAA GCGAGGGG TTTTTTATTTTAAGT TERM 165 156344 - 156360 + F 73 -3.8 -5.02201 | TCGCTTTCTCTTTCC TCATTA TAATT TAATGA TTTTTATAATATTTT YPTB0127 157214 - 158170 + | ABC transporter, periplasmic ribose/sugar binding protein TERM 166 158175 - 158199 + F 87 -8.4 -4.4195 | overlap 158178 TTGGTTATTGATTCA GATGGCGGGG CTTGC CCCCGCCTGC TTTTATCACCTGTAT TERM 167 158178 - 158196 + F 95 -13.1 -3.18044 | overlap 158175 GTTATTGATTCAGAT GGCGGGG CTTGC CCCCGCC TGCTTTTATCACCTG YPTB0128 158256 - 159746 + | sugar ABC transporter ATPase YPTB0129 159758 - 160777 + | ABC ribose/sugar transporter, permease domain YPTB0130 160777 - 161769 + | inner membrane ABC transporter permease protein YjfF YPTB0131 162637 - 161756 - | transcriptional regulator HdfR TERM 168 162926 - 162940 + G 73 -10 -3.38046 | opp_overlap 162924 162926, overlap 162924 AGTAACGGAAGAAGA GCAACG GTT CGTTGC TGTTTGCCGTGGCGA TERM 169 162940 - 162926 - g 74 -10 -3.45087 | opp_overlap 162926 162924, overlap 162924 AGTAACGGAAGAAGA GCAACG GTT CGTTGC TGTTTGCCGTGGCGA YPTB0132 162756 - 163094 + | hypothetical protein TERM 170 163455 - 163470 + T 100 -11.8 -4.20516 | GTTAGTTGAGTATTA GGGGGC TTTG GCCCCC TTTGTTACATCAGGC YPTB0133 164998 - 163475 - | putative magnesium chelatase family protein TERM 171 165506 - 165529 + H 100 -13.8 -5.7946 | opp_overlap 165506 TTAATCTCAAGAGAA CCCCCGCACC GAAA GGTCCGGGGG TTTTTTTATTGGCAC TERM 172 165529 - 165506 - H 100 -13.8 -3.69069 | opp_overlap 165506 TTAATCTCAAGAGAA CCCCCGCACC GAAA GGTCCGGGGG TTTTTTTATTGGCAC ilvG 165622 - 167268 + | acetolactate synthase 2 catalytic subunit ilvM 167265 - 167522 + | acetolactate synthase 2 regulatory subunit TERM 173 167958 - 167944 - g 73 -10 -3.28924 | opp_overlap 167944 167943 TATCTGGGTGCAGAA GCCTTG GAG CAAGGC ATTGATGCTATGGTG ilvE 167545 - 168471 + | branched-chain amino acid aminotransferase ilvD 168782 - 170632 + | dihydroxy-acid dehydratase TERM 174 170661 - 170682 + G 71 -10.1 -2.87344 | TTCGCAACCCTTATC TGCTGCCCC CTGC GGGGCAGAA TATCTGCGGGCGATA ilvA 170638 - 172182 + | threonine dehydratase YPTB0139 172777 - 172313 - | hypothetical protein TERM 175 172607 - 172631 + g 80 -9.4 -4.25056 | overlap 172608 TAGCCACCAGTTTAT TTTCCCTTTC TCAGT GAAAGGGAAG TTTCTTACTAAAATA TERM 176 172608 - 172630 + g 76 -10.7 -3.14552 | overlap 172607 AGCCACCAGTTTATT TTCCCTTTC TCAGT GAAAGGGAA GTTTCTTACTAAAAT YPTB0140 173259 - 172795 - | hypothetical protein YPTB0141 173800 - 173339 - | hypothetical protein YPTB0142 174662 - 173784 - | hypothetical protein TERM 177 174516 - 174529 + g 75 -5.3 -4.74453 | GCTTGAAATATTATG CAGAT TAAA ATCTG TTTTTAACTGTGTTG TERM 178 174986 - 174952 - H 70 -7.9 -3.64831 | opp_overlap 174949, overlap 174949 174953 CTAATAATGACATAA GCCGGATAAGCTTAT TATTG ACACGCTTATCCGGT TAACACCGCCTAAAT TERM 179 174985 - 174953 - H 81 -11.4 -2.78176 | opp_overlap 174949, overlap 174952 174949 TAATAATGACATAAG CCGGATAAGCTTAT TATTG ACACGCTTATCCGG TTAACACCGCCTAAA YPTB0143 175310 - 175519 + | hypothetical protein ilvY 176455 - 175574 - | DNA-binding transcriptional regulator IlvY TERM 180 175604 - 175618 + g 100 -11.4 -5.08824 | opp_overlap 175592 175604 AAATGCATCAATCAA CGGCTC TTG GAGCCG TTTTTTCGGTACACA TERM 181 175618 - 175604 - G 82 -11.4 -3.41982 | opp_overlap 175604, overlap 175592 AAATGCATCAATCAA CGGCTC TTG GAGCCG TTTTTTCGGTACACA TERM 182 176347 - 176315 - G 81 -7.6 -4.58395 | GTTATCGCGTAAAAA CAGGGGCTGGCCGA TAGTC TCTTCCAGCCGCTG GATCTGGCGGGAAAG TERM 183 176507 - 176532 + H 72 -9.9 -2.87529 | gap 1, opp_overlap 176505, overlap 176506 TGCATAAGAAATCGG GTG-TATTGCAG AAA CTGCAATATCAC ATTGTTAATATATCA ilvC 176746 - 178224 + | ketol-acid reductoisomerase TERM 184 178256 - 178278 + F 100 -9.8 -5.36441 | GTGATTTTATATTGA GCCTCCCTGT AAA AAAGGGGGGC TTTTTTATGTGCACC TERM 185 178340 - 178328 - f 75 -9.1 -3.58533 | GTAGAATTGCCGAAA CCCCA GGG TGGGG TAAGAATATTAGGTA TERM 186 180427 - 180417 - g 74 -6.8 -4.43909 | AGGCTAATAAAAGAA GCCA AGT TGGC TGAGGATGAAAAGGG YPTB0147 180249 - 180512 + | hypothetical protein TERM 187 180534 - 180562 + F 82 -3.2 -5.47964 | gap 1 ATATGCTTCAGTTAA CGTCCAGTCAATG AGTG TATTG-TTGGGCG TTTTTCTTATTTTAT TERM 188 180663 - 180653 - f 91 -5.4 -5.60993 | GGTTTGATAAAAAAA GAAG TTT CTTC TCAGCTAGTTAACAC YPTB0149 181028 - 181282 + | putative colicin immunity protein TERM 189 181302 - 181315 + F 72 -8.1 -3.81258 | opp_overlap 181296 AATATATAATCCGAA CCGTC TTAG GACGG TTTAAATGTTATTGA TERM 190 181701 - 181689 - g 83 -6.3 -4.946 | opp_overlap 181689 AGGAAATATTAAAAA TGGTA AAG TACCA TCTCCTAAAGAACGT pys2 181435 - 181854 + | putative pyocin S2 (partial) imm2 181856 - 182110 + | pyocin S2 immunity protein TERM 191 182155 - 182117 - f 89 -6.9 -5.3472 | gap 1, opp_overlap 182124, overlap 182124 AAAAAATAAATAAAA TATATAATCCAAACCGCC TTCT GGTGGTTTGGATT-TGTA AATATAATTAGTAAC TERM 192 182149 - 182124 - f 100 -11.9 -3.90424 | opp_overlap 182124, overlap 182117 AAATAAAATATATAA TCCAAACCGCC TTCT GGTGGTTTGGA TTTGTAAATATAATT TERM 193 182124 - 182149 + F 100 -14.1 -3.96188 | opp_overlap 182124 182117 AAATAAAATATATAA TCCAAACCGCC TTCT GGTGGTTTGGA TTTGTAAATATAATT pys2 182263 - 182691 + | putative pyocin S2 (partial) imm 182688 - 182951 + | colicin immunity protein (E7) TERM 194 183368 - 183389 + F 74 -9.5 -3.25823 | ATGCTGCCCGCAGGG TGAGTCTCA GGGG TGAGGCTCA TTAATCTCCAGGCGC YPTB0154 183509 - 183880 + | phage antitermination protein Q YPTB0155 184491 - 184826 + | hypothetical protein YPTB0156 185831 - 185085 - | putative chaperone protein TERM 195 185552 - 185523 - G 75 -11.5 -2.6062 | gap 1, opp_overlap 185526, overlap 185522 185520 185526 CCCACCAGATAAGAT CAACCGCAGGCTAC GCT GT-GCCTGAGGTTG TAACCGGAATACCGG YPTB0157 187236 - 185869 - | hypothetical protein TERM 196 185915 - 185933 + g 72 -5.9 -4.33004 | GCATTCACTGCTCCG GCGGTCA CCGTT TGCCCGC TTATTTTGCTTAACT TERM 197 186488 - 186507 + g 79 -10.7 -3.54129 | TCAGTACCCTCAATC GGGCCAG TAATTC CTGGCCC TTTAAACGCGATATA YPTB0158 189904 - 187253 - | putative outer membrane fimbrial usher porin TERM 198 188886 - 188874 - G 71 -6.3 -4.15044 | opp_overlap 188884, overlap 188884 CTGGTGCTGAACAAA TCGTT AAT AACGA ACGGGCCAGGAGCGA YPTB0159 190663 - 189932 - | putative fimbrial chaperone TERM 199 190715 - 190687 - R 86 -12.5 -2.52676 | opp_overlap 190684 190679 TACCTTCTGAAGTCA TTTACCGAGTGGT TAT ACCACCCGGTAAT AAATACATTTATTAC YPTB0160 191257 - 190727 - | putative fimbrial protein TERM 200 191338 - 191284 - R 82 -10.2 -3.71794 | opp_overlap 191293, overlap 191293 ATGTAATCATTGAAA TGGAGTTAATTCCCCATTCGGATTTT AAT AAAATCCGAATGGGGAATTTGATTGA GTGAATATATATTCC TERM 201 191329 - 191293 - R 100 -24.1 -3.11732 | opp_overlap 191293, overlap 191284 TTGAAATGGAGTTAA TTCCCCATTCGGATTTT AAT AAAATCCGAATGGGGAA TTTGATTGAGTGAAT TERM 202 191293 - 191329 + r 100 -24.1 -3.93556 | opp_overlap 191293 191284 TTGAAATGGAGTTAA TTCCCCATTCGGATTTT AAT AAAATCCGAATGGGGAA TTTGATTGAGTGAAT TERM 203 191379 - 191414 + r 100 -6.4 -6.06529 | gap 1, opp_overlap 191388, overlap 191380 GTTTTTATTATTCGT C-TCAAAATACCTTTTA ATT TCAAAGGTGTTTTGATG TTTTTTTTCTGTGTA TERM 204 191380 - 191412 + r 100 -10.1 -4.65669 | opp_overlap 191388, overlap 191379 TTTTTATTATTCGTC TCAAAATACCTTTTA ATT TCAAAGGTGTTTTGA TGTTTTTTTTCTGTG YPTB0161 192840 - 192049 - | hypothetical protein TERM 205 193037 - 193078 + r 71 -9.6 -3.06796 | gap 1, opp_overlap 193038 193040 193045, overlap 193045 GTATGACGAGTATAA ACATGAAATACGCCAC-CT TTTAT AGCGTGGCGTATTTCAGGA TTAGCTGCGGTACAA TERM 206 193077 - 193038 - R 100 -13.1 -4.00038 | gap 1, opp_overlap 193037 193045, overlap 193040 193045 TATGACGAGTATAAA CATGAAATACGCCAC-CT TTTAT AGCGTGGCGTATTTCAGG ATTAGCTGCGGTACA TERM 207 193075 - 193040 - R 100 -14.3 -3.58864 | gap 1, opp_overlap 193037 193045, overlap 193038 193045 TGACGAGTATAAACA TGAAATACGCCAC-CT TTTAT AGCGTGGCGTATTTCA GGATTAGCTGCGGTA TERM 208 193045 - 193070 + r 73 -8.4 -3.61268 | gap 1, opp_overlap 193040 193038 193045, overlap 193037 AGTATAAACATGAAA TACGCCAC-CT TTTAT AGCGTGGCGTA TTTCAGGATTAGCTG TERM 209 193070 - 193045 - R 77 -8.4 -4.05181 | gap 1, opp_overlap 193045 193037, overlap 193040 193038 AGTATAAACATGAAA TACGCCAC-CT TTTAT AGCGTGGCGTA TTTCAGGATTAGCTG ppiC 193360 - 193079 - | peptidyl-prolyl cis-trans isomerase TERM 210 194452 - 194467 + G 77 -2.6 -5.26316 | opp_overlap 194463 GCCAACAACCCACAT GTTTTT GAAA AGAAAC TTTTTTCTGAACTGA TERM 211 195430 - 195446 + G 78 -7.9 -4.47328 | TACGGCGAGTTGATT CGGCCAG AAC CTAGCCG TTTTCTGATGGAGTT TERM 212 195546 - 195529 - g 100 -11.3 -4.66609 | opp_overlap 195528 195527 GAGCGTATGCAAAAA GGCCAGA GTCA TCTGGCC AATCTTCGTGCTCAG rep 193564 - 195585 + | ATP-dependent DNA helicase Rep TERM 213 195665 - 195642 - T 84 -11.1 -3.69702 | overlap 195645 CAGTAGTGAAGATAA TAACGGGCA GTCTAT TGCCCGTTA GCCATGCATTAAGGC TERM 214 195662 - 195645 - T 77 -8.4 -3.97511 | overlap 195642 TAGTGAAGATAATAA CGGGCA GTCTAT TGCCCG TTAGCCATGCATTAA YPTB0164 197249 - 195753 - | guanosine pentaphosphate phosphohydrolase rhlB 198539 - 197253 - | ATP-dependent RNA helicase RhlB TERM 215 197791 - 197809 + g 85 -3 -5.59655 | opp_overlap 197793, overlap 197792 197793 CATTCTTCTTCAATT AACGTCTG TAA CAGACGCA TTTTTTCTTCATTTG TERM 216 197807 - 197793 - G 73 -10 -3.33696 | opp_overlap 197793 197792 197791 TTCTTCTTCAATTAA CGTCTG TAA CAGACG CATTTTTTCTTCATT TERM 217 197850 - 197860 + g 76 -2.4 -5.25803 | CAGCTCTTCTTTGAT GCGG TGA CCGG TTTTTTGTAACGGTT trxA 198658 - 198984 + | thioredoxin 1 TERM 218 199767 - 199789 + G 71 -6.9 -4.28369 | GTTGCCGGTAAGATT CGTCCGCCT AAAGA AGGCGAGCG TTATTTTGCATTGTT TERM 219 200052 - 200070 + G 74 -6.8 -4.35461 | overlap 200054 GCGACCAGCATTGCT TACAATCA CCC TGATTGTG TTTTGATGGTATTGC rho 199464 - 200723 + | transcription termination factor Rho TERM 220 200893 - 200875 - f 100 -11.7 -4.23892 | opp_overlap 200875 TTGAATCAGTCAAAA CGCCACG CCAGT CGTGGCG TTTTTTACTTTTGGA TERM 221 200875 - 200893 + F 100 -11.7 -5.46698 | opp_overlap 200875 TTGAATCAGTCAAAA CGCCACG CCAGT CGTGGCG TTTTTTACTTTTGGA rfe 201257 - 202354 + | putative undecaprenyl-phosphate alpha-GlcNAc transferase wzzE 202390 - 203451 + | lipopolysaccharide biosynthesis protein WzzE rffE 203800 - 204930 + | UDP-N-acetylglucosamine 2-epimerase TERM 222 204974 - 204988 + G 76 -7 -4.42238 | overlap 204972 TGGGTATATTGGTCT GCCGAC CGC GGCGGC TTTTGCTTCGCGTAA wecC 204927 - 206189 + | UDP-N-acetyl-D-mannosamine dehydrogenase rffG 206186 - 207253 + | dTDP-D-glucose-4,6-dehydratase TERM 223 207929 - 207911 - g 82 -10.2 -3.93061 | opp_overlap 207918 207920 207920 AGTCCAAAACTGAAA GCTGTCGC CGC GCGTCAGC AGGGCGCGACTGTTT rffH 207548 - 208429 + | glucose-1-phosphate thymidylyltransferase rffC 208476 - 209144 + | TDP-fucosamine acetyltransferase rffA 209146 - 210276 + | TDP-4-oxo-6-deoxy-D-glucose transaminase TERM 224 210312 - 210341 + G 88 -13.7 -3.20227 | overlap 210311 CGATTTGGACTGCCT GCTCTACGCTAAT CAAG ATTGGCGTAGGGC TATTGGTGGTTAAAC wzxE 210278 - 211534 + | PST family o-antigen export protein TERM 225 211773 - 211798 + G 80 -7.5 -4.64861 | gap 1, overlap 211784 GAGGCGGTTATTGCC CGTGCACAGGCG GAT CGCA-GTGCGCG TTTCTTTTGGCACGG YPTB0177 211557 - 212642 + | 4-alpha-L-fucosyltransferase wecF 212639 - 214003 + | putative entero common antigen polymerase TERM 226 214705 - 214719 + G 76 -7.2 -4.4078 | overlap 214701 CGCATTCGTCGTCAG CTTAAG CTG CTTAAG TTTGTTGGTTATTAT wecG 214012 - 214752 + | putative UDP-N-acetyl-D-mannosaminuronic acid transferase TERM 227 215887 - 215899 + G 90 -10.5 -4.41348 | GCTTCGATAACCTGA CCGCC CAT GGCGG TTTCTTTGCCGGGGG YPTB0180 215316 - 216707 + | putative transport protein YifK TERM 228 217228 - 217201 - T 73 -7.2 -4.08706 | TTCGCACCACACAAA CATGTAGATATT TATT AATATTTACATG GACATAGGTCGAGAG TERM 229 217360 - 217374 + T 100 -12.8 -5.78622 | opp_overlap 217360 CAATTTCAGAAGAAA CCCCGC AAT GCGGGG TTTTTTTTCGCCTGA TERM 230 217374 - 217360 - T 100 -12.8 -4.33248 | opp_overlap 217360 CAATTTCAGAAGAAA CCCCGC AAT GCGGGG TTTTTTTTCGCCTGA TERM 231 218113 - 218134 + T 100 -10.2 -6.38039 | opp_overlap 218115 CCTGAAAATTTTAGA CACTTGCC CTTTTC GGCAAGTG TTTTTTTTTTGGGTG hemY 219447 - 218227 - | putative protoheme IX biogenesis protein hemX 220574 - 219450 - | putative uroporphyrinogen III C-methyltransferase TERM 232 219822 - 219832 + g 71 -6.8 -4.28762 | opp_overlap 219822 GAAATCAGACATAAA GCTG CGC CAGC TTTTACTCAGATTCT TERM 233 219832 - 219822 - G 71 -6.8 -4.19024 | opp_overlap 219822 GAAATCAGACATAAA GCTG CGC CAGC TTTTACTCAGATTCT hemD 221354 - 220605 - | uroporphyrinogen-III synthase TERM 234 220838 - 220820 - G 78 -11 -3.43203 | CCACCAGAATATCAA CACCGGCA CGT TGCCAGTG AGCACTTTGTTCGCT hemC 222292 - 221351 - | porphobilinogen deaminase cyaA 222786 - 225338 + | adenylate cyclase TERM 235 225355 - 225383 + T 86 -12 -2.94099 | opp_overlap 225350 225355, overlap 225357 ATGCTGACAAGCGAA TAGCCAATAAAA ACAGG TTTTATTGGCTA TCTCTAATAAGAAAG TERM 236 225383 - 225355 - T 86 -12 -3.23452 | opp_overlap 225355 225357, overlap 225350 ATGCTGACAAGCGAA TAGCCAATAAAA ACAGG TTTTATTGGCTA TCTCTAATAAGAAAG TERM 237 225357 - 225381 + T 76 -10.2 -3.02471 | opp_overlap 225355 225350, overlap 225355 GCTGACAAGCGAATA GCCAATAAAA ACAGG TTTTATTGGC TATCTCTAATAAGAA TERM 238 225884 - 225863 - T 84 -10.1 -3.74693 | TGCCACCGTATTAAA GGTGATCGC TCAG GCGGTCACC GAACTCGATAATAAA YPTB0186 227066 - 225858 - | putative transposase for IS285 insertion element TERM 239 227727 - 227739 + r 74 -4.9 -4.77778 | ACATCAAGTACTTCT TTGAA TTT TTCAA TTTTATCTATTTCTT TERM 240 227754 - 227771 + r 70 -3.5 -4.76963 | ATTTTATCTATTTCT TTATAGC CATC GTTATAA TTTTCTATTATCTCC TERM 241 228401 - 228436 + r 100 -10.6 -4.2828 | gap 1, opp_overlap 228406 228412, overlap 228408 TTTAGCGTGTTCCAA TTG-AATACCAACCGAG TTG CTCGGCTGGTATTGCGA TTTTACTCACTGAAA TERM 242 228430 - 228406 - R 100 -15.1 -3.17075 | opp_overlap 228401 228408, overlap 228412 CGTGTTCCAATTGAA TACCAACCGAG TTG CTCGGCTGGTA TTGCGATTTTACTCA TERM 243 228408 - 228428 + r 79 -11.1 -3.15768 | opp_overlap 228406 228412, overlap 228401 TGTTCCAATTGAATA CCAACCGAG TTG CTCGGCTGG TATTGCGATTTTACT TERM 244 228424 - 228412 - R 71 -9.1 -3.39529 | opp_overlap 228408 228401, overlap 228406 CCAATTGAATACCAA CCGAG TTG CTCGG CTGGTATTGCGATTT cyaY 228762 - 228439 - | frataxin-like protein YPTB0189 228914 - 229114 + | hypothetical protein TERM 245 229707 - 229735 + G 75 -11.7 -2.64616 | overlap 229706 AACCTATATTTTACG CGCCGCAGAGCAT ACG GTGCTGTGTGGCG TGGTGTCGATGGGCA dapF 229282 - 230106 + | diaminopimelate epimerase YPTB0191 230171 - 230875 + | hypothetical protein TERM 246 231244 - 231222 - g 73 -2.1 -5.02074 | CCACCTGCCAAAAAA TATTGATGT TGATG AAATCAATA AACTGCTGAGTATTG xerC 230872 - 231783 + | site-specific tyrosine recombinase XerC TERM 247 231867 - 231892 + G 77 -4 -5.0133 | gap 1, overlap 231867 231868 231870 AATCGGCCAGTGATC G-CGCGGACTG AACAG CAGTCTGTGGC TTTTTTACAACAGTA YPTB0193 231783 - 232499 + | flavin mononucleotide phosphatase TERM 248 232559 - 232548 - f 72 -7.2 -3.91716 | opp_overlap 232547 GGAGGGGGCAAACAA CCGG AGAC CCGG CATTGTGGCTATTTT TERM 249 232665 - 232637 - g 74 -4.3 -4.86621 | opp_overlap 232649, overlap 232640 232642 AGCCTGAATGAAAAA CAACGTGACGCCG TGG CCGCGCCGCGCGG CAACTTGTTGGTACT TERM 250 232662 - 232640 - g 77 -6.8 -4.53777 | opp_overlap 232649, overlap 232637 232642 CTGAATGAAAAACAA CGTGACGCCG TGG CCGCGCCGCG CGGCAACTTGTTGGT TERM 251 232649 - 232669 + G 88 -12.5 -3.75024 | opp_overlap 232640 232637 232642 AAACAACGTGACGCC GTGGCCGCG CCG CGCGGCAAC TTGTTGGTACTGGCC TERM 252 233064 - 233054 - g 71 -8.2 -3.66995 | GGCAAAAAAGACGAA GGGC TGC GCCC ACAACATATTGAGAG uvrD 232598 - 234760 + | DNA-dependent helicase II TERM 253 234773 - 234799 + T 76 -9.4 -3.40971 | overlap 234772 TAATCTGATATTTGT GGTGGTTGCAGT GTC AGTGCGGCCACC TATCTATTTTTATTT YPTB0195 235539 - 234874 - | TetR family regulatory protein TERM 254 236206 - 236217 + G 72 -5.8 -4.4767 | TAATGCTATGGCTAT CGCT TTCG AGCG TTTTATGGTGAGTCG YPTB0196 235967 - 237199 + | hypothetical protein YPTB0197 237213 - 238055 + | hypothetical protein TERM 255 238160 - 238139 - f 70 -5.9 -4.24948 | opp_overlap 238139 GCAGGATACGCAAAA CCGAAGT TGTTACTG ACTTCGG TTTTTTTTTGGGTCT TERM 256 238139 - 238160 + F 100 -7.3 -6.13 | opp_overlap 238139 GCAGGATACGCAAAA CCGAAGTTG TTAC TGACTTCGG TTTTTTTTTGGGTCT TERM 257 238881 - 238895 + G 81 -3.5 -5.42259 | gap 1, overlap 238843 AGAGTTGGACGATAT CGAGGC TTCG GCC-CG TTTTTTTGAAGATGA corA 238705 - 239655 + | magnesium/nickel/cobalt transporter CorA TERM 258 239738 - 239694 - T 100 -11.7 -5.5604 | gap 2, opp_overlap 239694 GCAACGAATAAAAAA GCCCGGTCACTC-A-ATTGGA CTAAC CCCAATATTGAGTAACCGGGC TTTTTTTCGGCATCT TERM 259 239694 - 239738 + T 100 -8.8 -5.42862 | gap 2, opp_overlap 239694 GCAACGAATAAAAAA GCCCGGTCACTC-A-ATTGG ACTAACC CCAATATTGAGTAACCGGGC TTTTTTTCGGCATCT rarD 240643 - 239753 - | drug/metabolite tranporter (DMT) superfamily protein RarD TERM 260 240417 - 240403 - G 83 -9.2 -4.41494 | overlap 240404 TACTGGCAATCAAAA CGGCGG TCA CCGCCA GTAACAATAGGCGCT TERM 261 240416 - 240404 - G 73 -10.5 -3.24414 | overlap 240403 ACTGGCAATCAAAAC GGCGG TCA CCGCC AGTAACAATAGGCGC YPTB0200 241200 - 240730 - | hypothetical protein pldA 241422 - 242300 + | phospholipase A TERM 262 242324 - 242356 + F 95 -14.2 -2.86164 | gap 1, opp_overlap 242331 242333 GGCGTTATCACAGTT TCAGACACAGGCCGG TCAG CCGGCCTGTG-CAGA TCTAATAGTTGGGGA TERM 263 242350 - 242331 - f 100 -15 -2.89191 | opp_overlap 242324, overlap 242333 TCACAGTTTCAGACA CAGGCCGG TCAG CCGGCCTG TGCAGATCTAATAGT TERM 264 242348 - 242333 - f 86 -11.8 -2.99649 | opp_overlap 242324, overlap 242331 ACAGTTTCAGACACA GGCCGG TCAG CCGGCC TGTGCAGATCTAATA reqQ 242377 - 244209 + | ATP-dependent DNA helicase RecQ rhtC 244316 - 244936 + | threonine efflux system TERM 265 244932 - 244983 + T 84 -10.9 -3.66216 | gap 1, opp_overlap 244949, overlap 244932 244971 AACTGATATTGTCCC G-CTAACGGGTTAGCCAACGGGGT ATTTA ACCCGGTTGGCTAGCCTGACAGGC TCTTTATACTTTGCG TERM 266 244932 - 244982 + T 77 -11.1 -2.79007 | opp_overlap 244949, overlap 244932 244971 AACTGATATTGTCCC GCTAACGGGTTAGCCAACGGGGT ATTTA ACCCGGTTGGCTAGCCTGACAGG CTCTTTATACTTTGC rhtB 245607 - 244987 - | homoserine/homoserine lactone efflux protein TERM 267 246767 - 246780 + G 73 -5.2 -4.56775 | overlap 246758 GTGCCGAGGCGCTTA GCGC CATATT GCGC TTTTTCGCGCAACAT pldB 245803 - 246816 + | lysophospholipase L2 YPTB0206 246851 - 247660 + | putative sugar phosphatase TERM 268 247698 - 247716 + F 100 -12.4 -4.06562 | TGATGCTGTGGAGTA GGGTGGCC TTT GGTCACCC TTTCTCCTTGGCGTT TERM 269 248119 - 248108 - g 74 -3 -5.04908 | AAAATAAAAAAATAA CAAT AAAT ATTG CTGAGAAGAAATTTA TERM 270 249121 - 249102 - g 83 -4.4 -5.41143 | gap 1 CATGGGTGAAAAAAA TCACTATCA GAA TG-TAGTGA GTCACGTTGAATAAT YPTB0207 247936 - 249135 + | hypothetical protein glpQ 250324 - 249209 - | glycerophosphodiester phosphodiesterase glpA 250949 - 252604 + | sn-glycerol-3-phosphate dehydrogenase subunit A glpB 252594 - 253868 + | anaerobic glycerol-3-phosphate dehydrogenase subunit B glpC 253865 - 255160 + | sn-glycerol-3-phosphate dehydrogenase subunit C TERM 271 255293 - 255269 - T 100 -13.6 -4.72631 | opp_overlap 255273 255290 AGTAAGTCAATAAAA CAGAGCGCGA GTGAG CCGCGCTCTG CTGGGACAGATTATT drcB 255831 - 255304 - | hypothetical protein yhhQ 256629 - 255961 - | hypothetical protein YPTB0214 256913 - 257167 + | cell developmental protein SirA zntA 259598 - 257232 - | zinc/cadmium/mercury/lead-transporting ATPase yhhN 260638 - 260012 - | hypothetical protein YPTB0217 260928 - 261248 + | hypothetical protein TERM 272 261553 - 261541 - g 79 -3.3 -5.252 | TATTGGCAGAAAAAA CAGCA GGA TGCAG AAAATGATCGCGCAC YPTB0218 261460 - 261879 + | hypothetical protein yhhL 262328 - 262056 - | hypothetical protein TERM 273 262298 - 262287 - G 76 -2.2 -5.32882 | overlap 262288 262290 CAGCAGTATAAAAAA CCAG ACGC CTAG CATCAGTAACCGGCC YPTB0220 262980 - 262318 - | 16S rRNA m(2)G966-methyltransferase TERM 274 263293 - 263271 - g 71 -6.4 -4.24002 | TCGCAAATGGCAAAA GAAAAAAAAC GTG GATTTTTTTC CTGGCTGGGTCTTGG TERM 275 263343 - 263325 - g 88 -12.4 -3.70773 | overlap 263336 CGTCAGAGTGAAGAA CCAGCAGC AGA GCCGCTGG CGACTGAAAAAGAAG TERM 276 264731 - 264711 - g 77 -3.1 -5.26875 | opp_overlap 264725, overlap 264712 CGGGTAATGAAAAAA CTGGACGGC GAC GCCCCCCAT GAGGTTATGCTGACA ftsY 263262 - 264986 + | cell division protein ftsE 264992 - 265660 + | cell division protein FtsE ftsX 265650 - 266603 + | cell division protein FtsX TERM 277 267352 - 267338 - g 73 -7.8 -4.09739 | opp_overlap 267343, overlap 267343 TCAACCTGCGTAAAA CCAAGC AGC GCCTGG GCTGGTTTAATCAGG rpoH 266914 - 267771 + | RNA polymerase factor sigma-32 TERM 278 267834 - 267814 - T 93 -11.2 -4.11183 | opp_overlap 267814 CGGCACGATAAAGAA GGGCGATA TTGAT TATCGCCC TTTTGCTTTTTGGCA TERM 279 267814 - 267834 + T 100 -11.2 -4.77757 | opp_overlap 267814 CGGCACGATAAAGAA GGGCGATA TTGAT TATCGCCC TTTTGCTTTTTGGCA YPTB0225 268370 - 267978 - | putative acetyltransferase TERM 280 268272 - 268250 - G 73 -4.8 -4.73388 | opp_overlap 268271 AACGTGCAGCAAAAA GTGGTCTACC CTC AGTAATCCAC TGTTGCCAGGCAGCA TERM 281 269159 - 269140 - g 85 -12.2 -3.39717 | ATTTATGAAGATGAA GGGGTGAT AATG ATCACCCC TGCTGCTACAAACGC TERM 282 269797 - 269786 - g 73 -7.2 -4.17023 | overlap 269794 269795 CTAACGATCTGAAAA CCGG CAAA CCGG TTGAGACCGTGATGG livK 268792 - 269907 + | ABC type periplasmic branched-chain amino acid-binding protein TERM 283 269997 - 270017 + F 100 -10.4 -4.70659 | CTTCTATCAACTGCA TCCCCTCG TATTC CGGGGGGA TTTTTCCCTCTACAG livH 270088 - 271014 + | branched-chain amino acid transporter permease subunit LivH TERM 284 271967 - 271946 - g 71 -8.7 -3.71672 | CCCGACCAAAATTAA GCTGACGGC ATTT ACCATCAGC GCGGCCTTTGCAGGT livM 271011 - 272297 + | leucine/isoleucine/valine transporter permease subunit livG 272294 - 273061 + | leucine/isoleucine/valine transporter ATP-binding subunit livF 273106 - 273807 + | leucine/isoleucine/valine transporter ATP-binding subunit YPTB0231 274035 - 274496 + | hypothetical protein YPTB0232 275717 - 274611 - | hypothetical protein TERM 285 275952 - 275900 - R 75 -8.3 -3.90559 | overlap 275893 ATTAACAATTAACAA TTAACAATTAACAATTAACAATTAA CAA TTAACTATTAACTATTAACTATTAA CTTCGAATACCAATG YPTB0233 276460 - 275942 - | hypothetical protein TERM 286 275999 - 276013 + g 78 -9.2 -4.13728 | TTTCCCTGCAGTATT GTCCCC TGC GGGGGC TTTTGCGGATATATG YPTB0234 277169 - 276522 - | hypothetical protein YPTB0235 277827 - 277141 - | hypothetical protein TERM 287 277688 - 277674 - GR 71 -7 -4.07868 | opp_overlap 277674 277672 TGATATCCAGATAAA GCGGTG TAT CGCCGC TGTTATACACCTGTA TERM 288 277674 - 277688 + gr 72 -9.2 -3.22951 | opp_overlap 277674, overlap 277672 TGATATCCAGATAAA GCGGTG TAT CGCCGC TGTTATACACCTGTA YPTB0236 280178 - 277845 - | hypothetical protein TERM 289 279048 - 279082 + g 85 -4.8 -5.49809 | overlap 279050 TTGTACGCTTTCTAT CACCCTGCTGCGTCCA AAT TGGACTAAACGGGGCG TTTTTTTACCCTTTG TERM 290 280379 - 280407 + r 81 -11.2 -3.4052 | gap 1, opp_overlap 280379 280381 280383 AATATGACGGATATA TACAGCCA-GGAA ATAA TTCCATGGCTGTA TTCATTAAATTAACA TERM 291 280407 - 280379 - R 79 -11.2 -2.93207 | gap 1, opp_overlap 280379, overlap 280381 280383 AATATGACGGATATA TACAGCCA-GGAA ATAA TTCCATGGCTGTA TTCATTAAATTAACA TERM 292 280405 - 280381 - R 71 -9.4 -3.01416 | gap 1, opp_overlap 280379, overlap 280379 280383 TATGACGGATATATA CAGCCA-GGAA ATAA TTCCATGGCTG TATTCATTAAATTAA YPTB0237 280936 - 280445 - | hypothetical protein TERM 293 281109 - 281122 + H 70 -5.3 -4.55689 | TAACGTTATTTCAAG TGGTA ATTA TACCA TTTTGTCTGAATGAT TERM 294 282237 - 282226 - g 89 -3.6 -5.5353 | GATATGAATAAAAAA GGCG ATTT CACC TATTTTGGCCGTAAA ugpB 281491 - 282810 + | glycerol-3-phosphate transporter periplasmic binding protein ugpA 283108 - 283992 + | glycerol-3-phosphate transporter permease TERM 295 284220 - 284230 + G 75 -5.4 -4.81863 | CCTTTCGGGTTGATG CTGT TGA ACAG TTTTGTTATGGCTTT TERM 296 284769 - 284784 + G 71 -6.8 -4.25256 | ATTTTGACTTTAATT CCACCG GTCG TGGTGG TTCTTTTGATGCAGC ugpE 283992 - 284837 + | glycerol-3-phosphate transporter membrane protein TERM 297 285500 - 285474 - g 75 -7.9 -4.2461 | opp_overlap 285497 ATTGTGATGAACAAA GGGGTTGCCGA GCAAA TCGGTACCCCC AGCGAGGTTTATAAA TERM 298 285836 - 285826 - g 71 -6.8 -4.25056 | opp_overlap 285825, overlap 285827 TATCCCATGAAGAAA TGCC AGT GGCA GGCAGTACATTGCAT ugpC 284844 - 285917 + | glycerol-3-phosphate transporter ATP-binding subunit ugpQ 285914 - 286663 + | cytoplasmic glycerophosphodiester phosphodiesterase TERM 299 286739 - 286705 - f 85 -5.7 -5.18726 | CCGCCATAATAAAAA CAGGTCAGCCATT CTTACATTT ACGGGCTGACCTG GCCCGGCCTGACAGG YPTB0243 286764 - 287720 + | malonate permease TERM 300 288067 - 288047 - g 74 -11.3 -2.95306 | AAATAAGACATTATA CTTTGAATG CGG CATTCAAAG AGGCGGCCTTGAGTT TERM 301 288479 - 288464 - g 80 -4.8 -5.14563 | opp_overlap 288464 CTGGTGAGCAAAAAA TTATCA TTCC TGATAA TGTCTTGCCTACACT YPTB0244 287857 - 288525 + | hypothetical protein TERM 302 288693 - 288712 + G 80 -9.3 -4.2803 | TCCTGATGCAGAGGG CCTTGCC AGTCTC GGCAAGG TTTTAAATTGCCCTG TERM 303 289308 - 289325 + G 80 -7.1 -4.57474 | TGCGGAATTACCCTC TTTTCCA AGTT TGGAAAA TTTTGTCTCACTTAA YPTB0245 288538 - 289740 + | hypothetical protein TERM 304 290060 - 290072 + GT 73 -3.3 -4.89729 | overlap 290050 GATGCGTGTCGGGCT GGCCG CAC TGGTC TTTTTGCCTTTTCTG metR 291687 - 290734 - | LysR family transcriptional regulator MadN 289947 - 290846 + | putative acetate efflux pump, MadN metE 291793 - 294069 + | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase TERM 305 294104 - 294119 + T 100 -11.8 -5.52096 | GTAGTGGGGCTTTTG GGGCGC TTTC GCGCCC TTTTTTATTGCGTTT YPTB0249 294927 - 294124 - | putative carboxymethylenebutenolidase TERM 306 294378 - 294363 - G 71 -10.4 -2.88544 | CTTTACCTCCATATA GCCCCA ACAC TGGGGC GCAGAGATCGATAGC TERM 307 294612 - 294600 - G 75 -7.7 -4.29738 | opp_overlap 294599 CGAGATCCACCAAAA CCTGA CGA TCAGG GACTTTTTTTACCAG TERM 308 294865 - 294884 + g 70 -7.8 -3.87373 | GGGGATCGTTGTTTC CCCACAGT GAAT ACCGTGGG TTTGTAACGAATGTA udp 295424 - 296185 + | uridine phosphorylase TERM 309 296219 - 296238 + F 100 -11.4 -4.36862 | TAGAGGGTTTGTTCT CGGGTCAG TTTA CTGGCCCG TTCTTTATTTCATCT YPTB0251 296306 - 297166 + | hypothetical protein TERM 310 297565 - 297584 + G 93 -6.4 -5.5112 | overlap 297567 GTATCCTTACGATCT GCTACCGT TTAT ACGGTATC TTTTTTGTTCGTAAG TERM 311 297567 - 297582 + G 78 -7.6 -4.39002 | overlap 297565 ATCCTTACGATCTGC TACCGT TTAT ACGGTA TCTTTTTTGTTCGTA TERM 312 298336 - 298349 + G 75 -8.1 -4.15222 | CTGAAATTCAATTCC CTGCG GTTA CGCAG TTTATTCACGGCGGT TERM 313 299052 - 299068 + G 81 -12.3 -3.0682 | GCCACGATTATCCTG CGCTTGG CGA CCAAGCG TGTGTATATGCTGAC YPTB0252 297507 - 299324 + | putative carbon starvation protein TERM 314 299353 - 299380 + F 100 -13.6 -5.5074 | opp_overlap 299357 TTGTGCTAATTTGTT TAAACGGCTGGA ATCT TCTAGCCGTTTA TTTTTTGTTAAGTTA TERM 315 300201 - 300214 + G 73 -2.3 -5.07107 | overlap 300211 TCTTCGAGCGTTGGG GGTTC TTTG GGGCC TTTTTTGGCCGTTTC YPTB0253 299861 - 300391 + | hypothetical protein rumC 300599 - 302104 + | putative DNA recombination protein TERM 316 302113 - 302137 + F 72 -7.7 -3.75015 | AGAGTAATTTAATTG GCACCGCAACC AGG GGGTGTGGGGC TTTCATCGGAGTTCT ubiE 302196 - 302951 + | ubiquinone/menaquinone biosynthesis methyltransferase YPTB0256 302983 - 303615 + | hypothetical protein ubiB 303615 - 305246 + | putative ubiquinone biosynthesis protein UbiB tatA 305426 - 305692 + | Sec-independent protein translocase protein TatA tatB 305696 - 306358 + | Sec-independent protein translocase protein TatB TERM 317 306434 - 306448 + G 83 -6.4 -4.98436 | opp_overlap 306434 306435, overlap 306435 TACTGAATTGTATAA TCACCA TTT TGGTGG TTTTTCTGGTATTGG tatC 306361 - 307137 + | TatABCE protein translocation system subunit TERM 318 307158 - 307173 + F 100 -11.8 -4.45168 | TGTGTTGATATTTAG CCGCCC TTCT GGGCGG TTTCTGTTTTGGAAC YPTB0261 307193 - 307975 + | DNase TatD TERM 319 307950 - 307970 + F 86 -10.3 -3.75153 | opp_overlap 307950 307949 307948 AAACTGATGAAAACG CCCGCCGGG TTT TCCGGCTGG TTTGAGTTAGGAGAA hemB 307990 - 309012 + | delta-aminolevulinic acid dehydratase TERM 320 309034 - 309072 + T 73 -8.9 -3.56273 | opp_overlap 309038 309046, overlap 309035 309038 ATAACTAAGAGTCAC AGCATTCAGATAGGCAC TAACT GCGCCTATCTGAATGAA TTCTATAATGATGAG TERM 321 309035 - 309071 + T 88 -12.4 -2.73443 | opp_overlap 309038 309046, overlap 309034 309038 TAACTAAGAGTCACA GCATTCAGATAGGCAC TAACT GCGCCTATCTGAATGA ATTCTATAATGATGA TERM 322 309068 - 309038 - T 100 -14.9 -2.66787 | opp_overlap 309035 309034 309038, overlap 309046 CTAAGAGTCACAGCA TTCAGATAGGCAC TAACT GCGCCTATCTGAA TGAATTCTATAATGA TERM 323 309038 - 309068 + T 88 -12.7 -2.64051 | opp_overlap 309038 309046, overlap 309035 309034 CTAAGAGTCACAGCA TTCAGATAGGCAC TAACT GCGCCTATCTGAA TGAATTCTATAATGA rfaH 309610 - 309122 - | transcriptional activator RfaH YPTB0264 309858 - 311354 + | 3-octaprenyl-4-hydroxybenzoate decarboxylase fre 311409 - 312110 + | FMN reductase TERM 324 312139 - 312123 - T 82 -5.7 -4.97402 | overlap 312124 TAAAAGCGATAAAAA GCCCGCC TCT GACCGGC GGGGAAATAGCAACT TERM 325 312142 - 312124 - T 73 -8.8 -3.56814 | overlap 312123 AAAAGCGATAAAAAG CCCGCC TCTGACC GGCGGG GAAATAGCAACTAAA fadA 313433 - 312270 - | 3-ketoacyl-CoA thiolase TERM 326 313390 - 313372 - G 78 -8 -4.33274 | CGTACATGACGAAAA GCCCCCCC TTT GGAGCGGC CCATCGGTGTACGCA fadB 315634 - 313445 - | multifunctional fatty acid oxidation complex subunit alpha TERM 327 313486 - 313474 - G 71 -9.1 -3.50335 | TGGTAGAAACATCAA GCAGC GCT GCTGC CACAGGATAATAACT TERM 328 314171 - 314184 + g 73 -8.1 -4.05033 | opp_overlap 314170 314167 ATCATTGACAACAAT TGGGG TTTT CCCCA TTTGTGTAGCGTAAG TERM 329 315372 - 315355 - G 77 -8.5 -4.1899 | opp_overlap 315366 315367, overlap 315370 CCAGTCGATTGAAAA TGGTGTT GGCG AACACCA GCCACTGGTGCAGTT TERM 330 315915 - 315889 - H 79 -8 -4.31835 | opp_overlap 315890, overlap 315890 AATTTGTAGAATAAA CGTCATCGAAAC ATG GTTTCGGTGACT ATGATAAGATAAAAA TERM 331 315914 - 315890 - H 84 -11.5 -3.18378 | opp_overlap 315890, overlap 315889 ATTTGTAGAATAAAC GTCATCGAAAC ATG GTTTCGGTGAC TATGATAAGATAAAA TERM 332 315890 - 315914 + H 93 -13.7 -2.79796 | opp_overlap 315890 315889 ATTTGTAGAATAAAC GTCATCGAAAC ATG GTTTCGGTGAC TATGATAAGATAAAA TERM 333 316048 - 316081 + G 74 -2.6 -5.1356 | overlap 316048 316049 CGTCATCAATTAGAT G-CGTTGCTGATTCAC TCTG GTGAATTA-CAGCGGC TTTTTCTTGATGACC pepQ 315961 - 317292 + | proline dipeptidase TERM 334 317436 - 317455 + G 100 -11.4 -4.64676 | opp_overlap 317434 317430 CAACAACATCCAACG GCCCGGCA TCAT TGCTGGGC TTTTGTTGCCGGTCC YPTB0269 317292 - 317903 + | hypothetical protein TERM 335 318183 - 318202 + G 93 -5 -5.55769 | TTTTGGACGGTGTTG GGTAGTGT CGGG GCATTACC TTTTTTATTCTCAGA TERM 336 318474 - 318463 - g 81 -5.8 -4.95302 | opp_overlap 318463 TGAAAGATAATAAAA TGCG GCCC CGCA TTGCTGAAACGGCTA trkH 317943 - 319394 + | potassium transporter hemG 319416 - 319949 + | protoporphyrinogen oxidase TERM 337 323785 - 323767 - f 82 -10.3 -3.57798 | overlap 323780 CATAAGTAACGATAA TGCGGGT GAAAA ACCCGCA CGCCGGAAGACCAAG TERM 338 324245 - 324219 - f 70 -9.4 -2.75844 | opp_overlap 324233 324241, overlap 324218 324221 GGCGTTAGGTGAAAG GACTAGCTCCTG GAG CTGAAGCCAGTC GCAGATACCAGCTGG TERM 339 324292 - 324281 - f 74 -4.4 -5.06816 | ACTGTTTAATAAAAA CACA GCAC TGTG CAAACACGAAAGTGG TERM 340 325404 - 325414 + F 74 -6.8 -4.27316 | opp_overlap 325404 GGCTTAACCTTACAA CACC GAA GGTG TTTTGAATTGAGAGA TERM 341 325670 - 325636 - f 95 -9.2 -4.50627 | opp_overlap 325643 CAGGCATCAAATAAA GCCAAGACCCCATGCC CAA AGCGTGGGGTTTTTGC TGTGCGCGAAACACA TERM 342 325643 - 325663 + F 100 -10.4 -4.8048 | opp_overlap 325636 CAAATAAAGCCAAGA CCCCATGC CCAAA GCGTGGGG TTTTTGCTGTGCGCG murB 326089 - 327126 + | UDP-N-acetylenolpyruvoylglucosamine reductase birA 327123 - 328082 + | biotin--protein ligase TERM 343 328109 - 328092 - T 71 -9.9 -2.63723 | opp_overlap 328089 328087 328084, overlap 328091 GTCTGATTAATTAAT GGGAGAT AACT ATCTCCC GTATAGATTATTTTC coaA 329067 - 328117 - | pantothenate kinase TERM 344 328618 - 328632 + g 100 -8.6 -5.5604 | opp_overlap 328618 ATTATGCATATCATA GGATTC CGG GAATCC TTTTTTCTTCATTAG TERM 345 328937 - 328961 + g 75 -5.7 -4.55093 | TCTAATGAAAGGTCT TCGTTAATCCC TTT GAGTTTAACGA TTTCTTCTTCTGTCA TERM 346 329131 - 329157 + r 91 -8 -4.8048 | opp_overlap 329132, overlap 329132 AACTCCAGATAAGAA ACAAGCTGCATA TTA TAGGCAGCTTGG TTTTTGGTGTAGACA TERM 347 329132 - 329156 + r 89 -11.5 -3.47806 | opp_overlap 329132, overlap 329131 ACTCCAGATAAGAAA CAAGCTGCATA TTA TAGGCAGCTTG GTTTTTGGTGTAGAC TERM 348 329156 - 329132 - R 100 -11.5 -4.39329 | opp_overlap 329132 329131 ACTCCAGATAAGAAA CAAGCTGCATA TTA TAGGCAGCTTG GTTTTTGGTGTAGAC YPTB0275 329829 - 329278 - | putative acetyltransferase tuf 330818 - 332002 + | elongation factor Tu TERM 349 332044 - 332027 - f 100 -11.3 -4.41548 | opp_overlap 332027 CGACATGCGATAAAA GGGCATC ATTT GATGCCC TTTTTATACGTTGCA TERM 350 332027 - 332044 + F 100 -11.3 -4.91712 | opp_overlap 332027 CGACATGCGATAAAA GGGCATC ATTT GATGCCC TTTTTATACGTTGCA TERM 351 332194 - 332218 + F 79 -7.9 -4.28115 | overlap 332195 332214 GCATCCTTCGGCTTG GTTTGCTTTGC GAT GCGAAGCAAAG TTGTTTGTTCTGAAT TERM 352 332195 - 332217 + F 84 -11.4 -3.15784 | overlap 332194 332214 CATCCTTCGGCTTGG TTTGCTTTGC GAT GCGAAGCAAA GTTGTTTGTTCTGAA TERM 353 332569 - 332612 + G 71 -6.8 -4.25056 | gap 1, overlap 332578 CTGCTGTAATGTCAC TGATTCTATGGGGACT-GGAT GGT ATCCTAGTCCGCTTGGTATCA TTTATTACTGGCCTG secE 332253 - 332636 + | preprotein translocase subunit SecE nusG 332638 - 333183 + | transcription antitermination protein NusG TERM 354 333224 - 333252 + F 100 -16.2 -5.2853 | TTGAGTCTTGTCTTA GGCGCGAAATTA AAATA TAATTTCGCGCC TTTTGTTTTTAGATG rplK 333374 - 333802 + | 50S ribosomal protein L11 rplA 333806 - 334510 + | 50S ribosomal protein L1 TERM 355 334533 - 334574 + F 77 -10.4 -3.16553 | gap 1, overlap 334530 334531 334534 334537 TTGCTTTTATCGCTT TA-CGTGGGCGTAAGGTTT GTCTA GAATCTTACGCCCATGCTA TCTGTTGATCGTTGT TERM 356 334534 - 334572 + F 79 -11.1 -3.13565 | overlap 334530 334533 334531 334537 TGCTTTTATCGCTTT ACGTGGGCGTAAGGTTT GTCTA GAATCTTACGCCCATGC TATCTGTTGATCGTT TERM 357 334537 - 334569 + F 93 -13.6 -2.76689 | overlap 334530 334534 334533 334531 TTTTATCGCTTTACG TGGGCGTAAGGTTT GTCTA GAATCTTACGCCCA TGCTATCTGTTGATC TERM 358 334713 - 334723 + F 71 -4 -4.88895 | opp_overlap 334713 334718 GTGACAGAACCTAAA GAAA ATT TTTC TTTCTTTATTTGTTT TERM 359 334753 - 334718 - f 73 -3.5 -4.94962 | opp_overlap 334713, overlap 334713 AGAACCTAAAGAAAA TTTTTCTTTCTTTAT TTGTTT ATAAAGAATGATAAA GAATAGTCTTTGCTG TERM 360 334797 - 334818 + F 71 -9.5 -3.06915 | GTGTTTCAACGCTCG TTCACGGCA ATTT TGTCGTGAA TTGGGTGACGTGAGT TERM 361 334835 - 334853 + F 95 -13.2 -3.14132 | TGGGTGACGTGAGTT CCGGAGAA TTA TTCTCCGG TTAATCCAGGAGCAA rplJ 334875 - 335372 + | 50S ribosomal protein L10 rplL 335439 - 335807 + | 50S ribosomal protein L7/L12 TERM 362 335847 - 335872 + F 100 -14.1 -4.64766 | ACTTTATAGGCTGAT GGCTGGTGACT TTTT AGTCATCAGCC TTTTTGCGCTGTAGG TERM 363 336804 - 336818 + G 73 -8.6 -3.9122 | opp_overlap 336791 AATTTCACCACTGCA CAGATC TTG GATCTG TTCTTTGAGAAAGTG TERM 364 339192 - 339176 - g 100 -10.9 -4.56314 | CGAAGACAAGCAAAA CCAACTG GAA CAGTTGG CAGAGCAGTACGACG TERM 365 340080 - 340070 - g 78 -5.4 -4.91459 | overlap 340058 CAAGATGTACAAAAA CATC GTG GATG GCGATCACCGTATGG rpoB 336150 - 340178 + | DNA-directed RNA polymerase subunit beta TERM 366 342119 - 342104 - g 71 -2.6 -5.00616 | gap 1 CCGCTGGGTAAAAAA GCTATCT CTA AGAT-GC TGAACACTTGTTACC rpoC 340307 - 344527 + | DNA-directed RNA polymerase subunit beta' TERM 367 344579 - 344547 - T 74 -10.1 -3.21099 | gap 1, opp_overlap 344552 344553, overlap 344553 TTTGCCTACTACCAA CAAAAA-CCGCATC TTTCGG GATGCGGGTTTTTG AGAGACGAACGGCCC TERM 368 344552 - 344573 + T 74 -6.5 -4.56597 | opp_overlap 344547 344553, overlap 344553 CTACTACCAACAAAA ACCGCATCT TTCG GGATGCGGG TTTTTGAGAGACGAA TERM 369 344572 - 344553 - T 100 -9.3 -5.15167 | opp_overlap 344552 344553, overlap 344547 TACTACCAACAAAAA CCGCATC TTTCGG GATGCGG GTTTTTGAGAGACGA TERM 370 344553 - 344572 + T 76 -10 -3.33744 | opp_overlap 344553 344547, overlap 344552 TACTACCAACAAAAA CCGCATCT TTCG GGATGCGG GTTTTTGAGAGACGA TERM 371 344589 - 344606 + T 100 -9.8 -6.5058 | opp_overlap 344589 TTTTTGAGAGACGAA CGGCCC CTTCTC GGGCCG TTTTTTTTTGTTTAT TERM 372 344606 - 344589 - T 76 -9.8 -3.32022 | opp_overlap 344589 TTTTTGAGAGACGAA CGGCCC CTTCTC GGGCCG TTTTTTTTTGTTTAT TERM 373 344795 - 344808 + T 70 -3.7 -4.74706 | opp_overlap 344796, overlap 344796 TAACTCACTGATATT ACGCC TTCG GGCGG TTTTTCAATATTACG thiH 345963 - 344833 - | thiamine biosynthesis protein ThiH TERM 374 345242 - 345232 - G 73 -3.2 -4.86731 | overlap 345236 TTGTTGCAAATAAAA CAGA TGC TCCG CCAGCATATAACAGT thiG 346771 - 345956 - | thiazole synthase thiS 346988 - 346773 - | sulfur carrier protein ThiS thiF 347782 - 346985 - | thiamine biosynthesis protein ThiF TERM 375 347286 - 347299 + g 77 -4.5 -4.85599 | overlap 347278 AACCCTACAGCACTG CCGCT GATT AGTGG TTTTTGTGCCGTGAC thiE 348419 - 347772 - | thiamine-phosphate pyrophosphorylase TERM 376 348003 - 347977 - G 74 -10 -3.55563 | opp_overlap 347977 347976 347995, overlap 347979 ACCTGACGGCTTAAA GACGCCAACCCC TGT GGGGATGACGGC ATCTGTTTGGTCTGA TERM 377 348001 - 347979 - G 78 -11.2 -3.35597 | opp_overlap 347977 347976 347995, overlap 347977 CTGACGGCTTAAAGA CGCCAACCCC TGT GGGGATGACG GCATCTGTTTGGTCT thiC 350478 - 348433 - | thiamine biosynthesis protein ThiC rsd 351362 - 350853 - | anti-RNA polymerase sigma 70 factor nudC 351459 - 352241 + | NADH pyrophosphatase YPTB0293 352334 - 353119 + | hypothetical protein TERM 378 353416 - 353434 + G 78 -11 -3.33492 | TAGCCTGTGAGGTCA CGATGCAG CCA CTGCGTCG TTATCCGCTGGATGC TERM 379 354110 - 354093 - g 79 -9.9 -3.85698 | CGTGTTGGTGATAAA GTTGCCT TGCA AGGCAAC ATGGATCCTTCGGTT hemE 353238 - 354305 + | uroporphyrinogen decarboxylase TERM 380 354563 - 354579 + G 79 -10.9 -3.56959 | opp_overlap 354562, overlap 354566 CTGGTGGAATACCAG GTTGCCA GAG TGGCAAC TTCTCTGCCTTATAT nfi 354371 - 355075 + | endonuclease V YPTB0296 355121 - 355711 + | hypothetical protein hupA 355900 - 356175 + | transcriptional regulator HU subunit alpha TERM 381 356203 - 356216 + G 78 -5.2 -4.99043 | AATAATAAGCAGGGG GGGG ATAAAA CCCC TTTTGTTTATGCGGC yjaH 356177 - 356878 + | hypothetical protein purD 358350 - 357064 - | phosphoribosylamine--glycine ligase TERM 382 357340 - 357308 - G 80 -12 -2.87003 | overlap 357303 357305 CCATGAATAACATCA CCCTGGCGGTAATC TGCTG GATAACCGCCAGCG GCTAAAACGACCCCC purH 359999 - 358410 - | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase TERM 383 362525 - 362488 - H 78 -5.7 -4.7629 | opp_overlap 362482 362488 362491, overlap 362491 TTATGAACTGAAAAA TAACGTAAAGATGACTT TACC AAGTCGTGTTTACGATA TTGCTCTTTAACAAT TERM 384 362522 - 362491 - H 78 -7.4 -4.47888 | opp_overlap 362488 362482 362491, overlap 362488 TGAACTGAAAAATAA CGTAAAGATGACTT TACC AAGTCGTGTTTACG ATATTGCTCTTTAAC TERM 385 363981 - 363963 - H 82 -10.3 -3.57798 | overlap 363976 CATAAGTAACGATAA TGCGGGT GAAAA ACCCGCA CGCCGGAAGACCAAG TERM 386 364441 - 364415 - H 70 -9.4 -2.75844 | opp_overlap 364429 364437, overlap 364414 364417 GGCGTTAGGTGAAAG GACTAGCTCCTG GAG CTGAAGCCAGTC GCAGATACCAGCTGG TERM 387 364488 - 364477 - H 74 -4.4 -5.06816 | ACTGTTTAATAAAAA CACA GCAC TGTG CAAACACGAAAGTGG TERM 388 365603 - 365613 + H 74 -6.8 -4.27316 | opp_overlap 365603 GGCTTAACCTTACAA CACC GAA GGTG TTTTGAATTGAGAGA TERM 389 365868 - 365834 - H 95 -9.2 -4.50627 | opp_overlap 365834 365841 CAGGCATCAAATAAA GCCAAGACCCCATGCC CAA AGCGTGGGGTTTTTGC TGTGTGCGAAACACA TERM 390 365834 - 365868 + H 91 -12.9 -2.87132 | opp_overlap 365834, overlap 365841 CAGGCATCAAATAAA GCCAAGACCCCATGC CCAAA GCGTGGGGTTTTTGC TGTGTGCGAAACACA TERM 391 365841 - 365861 + H 100 -10.4 -4.84527 | opp_overlap 365834, overlap 365834 CAAATAAAGCCAAGA CCCCATGC CCAAA GCGTGGGG TTTTTGCTGTGTGCG TERM 392 365907 - 365927 + H 100 -14.7 -4.84527 | opp_overlap 365907 GCGTTTTACTGATAA CCCCATGCC AAA GGCGTGGGG TTTTTGCTGTGTACG TERM 393 365927 - 365907 - H 95 -12.5 -3.35679 | opp_overlap 365907 GCGTTTTACTGATAA CCCCATGCC AAA GGCGTGGGG TTTTTGCTGTGTACG YPTB0301 366224 - 366490 + | truncated IS1617 transposase YPTB0302 366568 - 367323 + | putative transposase TERM 394 367344 - 367363 + T 79 -7.8 -4.31859 | overlap 367343 367340 CCTGGTACGGATATT GGGGAGGG ATCA TCCTCTCC TTATTATTTTGTTCG YPTB0303 368495 - 367716 - | transposase/IS protein TERM 395 368414 - 368428 + g 82 -11.4 -3.3506 | overlap 368427 CTGCCTGTTGTGACA GCGCAG GCG CTGCGC TTATAAGGCTTTCCA YPTB0304 369517 - 368495 - | putative transposase TERM 396 369468 - 369483 + g 71 -4.6 -4.56914 | overlap 369469 GCCCGGCTACTCATT CCCTGC TTGT GCAGGA TTTTAATTTCCATAA TERM 397 369539 - 369521 - H 100 -13.2 -4.01078 | AAAAGTGACCATAAA CTCTCCTG AAT CAGGAGAG CAGATTACCCCCTGG ytaP 369677 - 370834 + | hypothetical protein TERM 398 370875 - 370888 + T 85 -9.5 -4.1721 | opp_overlap 370875 TTTGTCAGCAATCTA GGCCC CTAA GGGCC TTTTAACCTGTAAAT actP 372563 - 370908 - | acetate permease YPTB0307 372871 - 372560 - | hypothetical protein TERM 399 372902 - 372925 + r 76 -11 -2.72829 | opp_overlap 372901 372902, overlap 372902 GAGGCATCAATTAAG TTTGCCGCCT ATAT AGGCGGCACA ATTTACGACGGTGTC TERM 400 372902 - 372926 + r 76 -9.4 -3.5525 | gap 1, opp_overlap 372901 372902, overlap 372902 GAGGCATCAATTAAG TT-TGCCGCCT ATAT AGGCGGCACAA TTTACGACGGTGTCT TERM 401 372925 - 372902 - R 76 -11 -2.64199 | opp_overlap 372902 372902, overlap 372901 GAGGCATCAATTAAG TTTGCCGCCT ATAT AGGCGGCACA ATTTACGACGGTGTC rcs 374886 - 372928 - | acetyl-CoA synthetase TERM 402 373878 - 373854 - G 74 -9.4 -3.72324 | gap 1, opp_overlap 373853 TATGTTTATCAACAA CCTGGC-TCAA GCGA TTGACGCCAGG GTAGTTAGGCACGCC TERM 403 375150 - 375166 + H 76 -6.7 -4.43909 | opp_overlap 375150, overlap 375147 GACTAAAGTAATTTA CATTTAT TAA ATAAATG TTGTTTTATTACCAT gltP 375741 - 377057 + | glutamate/aspartate:proton symporter TERM 404 377138 - 377166 + T 100 -16.1 -5.38054 | AATAGTCTCTACCCA CTCCCCGTCAG CGTCAGA CTGACGGGGAG TTTTTATTTGTCGCC YPTB0310 377867 - 377235 - | putative two-component response regulator YPTB0311 380699 - 377880 - | two-component sensor/regulator YPTB0312 380872 - 382443 + | type III secretion protein EscC/SpiA, outer membrane pore YPTB0313 382445 - 383659 + | putative type-III secretion protein, EscD/SpiB YPTB0314 383678 - 383899 + | hypothetical protein TERM 405 384491 - 384509 + G 72 -6 -4.386 | overlap 384493 ATTGGGTATTTCGAC CCGGAAAT TGA ATTTCCTG TTTTATGAGAAATTC YPTB0315 383934 - 384713 + | AraC family transcriptional regulator YPTB0316 384723 - 384938 + | putative type III secretion apparatus YPTB0317 384935 - 385183 + | putative type III secretion apparatus YPTB0318 385281 - 385532 + | putative type III secretion apparatus YPTB0319 385529 - 386260 + | type III secretion system apparatus lipoprotein, EscJ/SsaJ YPTB0320 386455 - 387048 + | hypothetical protein YPTB0321 387045 - 387692 + | putative type III secretion system apparatus protein TERM 406 388618 - 388637 + G 81 -3.4 -5.42514 | overlap 388613 388612 TTTATCACTTTGGCG GCCGCGGT TGCG GCTCCGGC TTTTTTACTTTATCG YPTB0322 387685 - 389733 + | secretion system apparatus protein SsaV YPTB0323 389720 - 391057 + | type III secretion system ATPase YPTB0324 391054 - 391455 + | type III secretion system apparatus protein TERM 407 391768 - 391756 - g 90 -9.1 -4.54449 | ACAGCGCATACAAAA CCGCT GGC AGCGG CAACTGCATCAGTTA YPTB0325 391619 - 391834 + | hypothetical protein YPTB0326 391854 - 392774 + | type III secretion system protein YPTB0327 392841 - 393551 + | type III secretion system protein YPTB0328 393548 - 393841 + | putative type III secretion apparatus protein EscS/SsaS/YscS TERM 408 394515 - 394504 - g 73 -7.2 -4.26076 | opp_overlap 394504 CGATGCCCATTAAAA GCGC ACTG GCGC TTTTTCTCTTACTGA TERM 409 394504 - 394515 + G 88 -7.2 -5.1244 | opp_overlap 394504 CGATGCCCATTAAAA GCGC ACTG GCGC TTTTTCTCTTACTGA YPTB0329 393843 - 394637 + | putative type III secretion apparatus protein EscT/SsaT/YscT YPTB0330 394627 - 395694 + | secretion system apparatus protein SsaU TERM 410 395815 - 395799 - f 76 -9.5 -3.40878 | overlap 395797 ATTATGTGAATAATA GGCTTAT TAT ATAAGCC TCAGACTGCTGACAA TERM 411 395904 - 395878 - f 84 -10.1 -3.82218 | gap 1, opp_overlap 395887, overlap 395879 395894 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 412 395905 - 395879 - f 72 -10.1 -2.88849 | gap 1, opp_overlap 395887, overlap 395878 395894 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT TERM 413 395983 - 396005 + F 72 -7.8 -3.77489 | opp_overlap 395986, overlap 395984 395986 TTGTCAATAACCTCA ATAGGCTTAT TAT ATAAGCCTAC TTTCCCTGTTACCTT TERM 414 395984 - 396004 + F 81 -11.3 -2.8577 | opp_overlap 395986, overlap 395983 395986 TGTCAATAACCTCAA TAGGCTTAT TAT ATAAGCCTA CTTTCCCTGTTACCT TERM 415 396002 - 395986 - f 72 -9.5 -3.12749 | opp_overlap 395984 395983 395986 TCAATAACCTCAATA GGCTTAT TAT ATAAGCC TACTTTCCCTGTTAC TERM 416 395986 - 396002 + F 71 -9.5 -2.974 | opp_overlap 395986, overlap 395984 395983 TCAATAACCTCAATA GGCTTAT TAT ATAAGCC TACTTTCCCTGTTAC TERM 417 396647 - 396614 - g 73 -2.3 -5.05228 | overlap 396615 ATTAAACTACAAAAA GTGACTGCCGCCTCA CCAC TGACGCAGCACCCAG CCAGAGCGGCACGCC YPTB0331 396077 - 397291 + | putative inner membrane protein YPTB0332 397288 - 397557 + | hypothetical protein YPTB0333 398621 - 397635 - | LysR family transcriptional regulator TERM 418 398412 - 398383 - G 79 -10.1 -3.63839 | gap 1, opp_overlap 398382 398380 398379 398383 398406 TGATGAAACAAGTAA TCGCCAGCATCGGT TAA AACGATGCTG-CGA GTGGTTCTTTTTAAT YPTB0334 398788 - 400074 + | putative HAAAP (hydroxy/aromatic amino acid permease) family protein metC 400120 - 401301 + | cystathionine beta-lyase TERM 419 401402 - 401414 + T 77 -4.7 -5.0538 | GTTGGTGCTTTGGAA CCGCC ATA GGCTG TTTTTTAGCATAGCG hmuV 402242 - 401442 - | hemin importer ATP-binding subunit TERM 420 401834 - 401822 - G 83 -9.1 -4.4009 | CGCCACCGGATAAAA CGCGA TAG TCGCG CTGTGCCAGTGCCAG hmuU 403239 - 402235 - | ABC hemin transporter, permease subunit HmuU hmuT 404075 - 403236 - | ABC transporter, periplasmic hemin-binding protein hmuT TERM 421 403871 - 403904 + g 76 -11 -3.11192 | opp_overlap 403871 403874 403876, overlap 403873 GCGTGCGCATATAAC CAACATCAGGCAGC TTTTGC GCTGCCTGAGGCTG TTGACTGGTGCTGTC TERM 422 403904 - 403871 - G 84 -13.2 -2.68823 | opp_overlap 403871 403873, overlap 403874 403876 GCGTGCGCATATAAC CAACATCAGGCAGC TTTTGC GCTGCCTGAGGCTG TTGACTGGTGCTGTC TERM 423 403901 - 403874 - G 79 -11.3 -3.49618 | opp_overlap 403873 403871, overlap 403871 403876 TGCGCATATAACCAA CATCAGGCAGC TTTTGC GCTGCCTGAGG CTGTTGACTGGTGCT TERM 424 403899 - 403876 - G 85 -12.5 -3.32023 | opp_overlap 403873 403871, overlap 403874 403871 CGCATATAACCAACA TCAGGCAGC TTTTGC GCTGCCTGA GGCTGTTGACTGGTG hmuS 405109 - 404072 - | hemin degradation/transport protein hmuS TERM 425 405195 - 405167 - R 82 -10.3 -3.60419 | opp_overlap 405163 ATTGTCAAATGATAA TCCGGCAAGCCAC AAA ATGGATTACCGGA TGAATGATTTCAGAC hmuR 407258 - 405228 - | tonB dependent outer membrane hemin receptor, hmuR TERM 426 405303 - 405347 + g 74 -11 -2.79291 | gap 1, overlap 405309 CGCGTAATACTCTTT TTCGAAGGCATTACC-CAATA ACAT TGTTGTGGTCATGCCTTTGAA TGCTTCCTGGCCTTT YPTB0341 407580 - 407389 - | hemin uptake protein HEMP TERM 427 407544 - 407507 - G 76 -8.3 -4.12532 | opp_overlap 407506 407513 CTGGCGATAGACAAA GGCTTACGTGCCACCGA ATAT TCGGTGGCAGGTTCGTC ATTTAACATTGGCAC TERM 428 407513 - 407538 + g 91 -13.3 -3.33037 | opp_overlap 407507, overlap 407506 ATAGACAAAGGCTTA CGTGCCACCGA ATAT TCGGTGGCAGG TTCGTCATTTAACAT YPTB0342 408316 - 407666 - | hypothetical protein YPTB0343 408913 - 408350 - | hypothetical protein TERM 429 408541 - 408551 + g 73 -5.4 -4.52047 | overlap 408532 GTTCCAGCAGGGCGA TTGC CTG GCAA TTTTGTGCTCTGATA YPTB0344 410223 - 408910 - | coproporphyrinogen III oxidase TERM 430 410452 - 410433 - R 70 -3.5 -4.78981 | opp_overlap 410445, overlap 410435 410447 ATCAAGCAAAAGAAA TGGGGGT TGATAT AGCCCCA CCCATCAGAGTGAGG YPTB0345 411364 - 410564 - | putative methylenetetrahydrofolate reductase TERM 431 410794 - 410781 - G 73 -2.3 -5.09521 | opp_overlap 410782, overlap 410782 TCAATAAATGAAAAA TTGCC AAGT GGCAT TATGGATGGCGTAAA YPTB0346 412167 - 411679 - | hypothetical protein YPTB0347 413523 - 412564 - | putative ATP/GTP-binding protein YPTB0348 414602 - 413523 - | hypothetical protein TERM 432 414310 - 414291 - G 78 -12.2 -2.57944 | overlap 414290 GAGCATCACACCAAG TGGTACGC CCGC GCGTACCA AGCTGGCGAGCACGA YPTB0349 415407 - 414595 - | hypothetical protein TERM 433 414882 - 414871 - G 71 -4.4 -4.66938 | ACGGTGAATATAAAA TCCA TCAG TGGA AAAGAGGGATTCCAG YPTB0350 416536 - 415400 - | hypothetical protein TERM 434 416131 - 416147 + g 74 -4.3 -4.94058 | AATAGAGCAGGTGAT CCGTTGC ATG GCTATGG TTTTCTTTGAATTCG YPTB0351 417609 - 416548 - | hypothetical protein TERM 435 417407 - 417422 + g 72 -6.1 -4.3467 | opp_overlap 417407 AATGCTTTCACGATA TGGCG GATAAA CGCCA TTTTGGTATCAAGAT terZ 417885 - 418478 + | tellurium resistance protein TERM 436 418494 - 418506 + G 73 -10.5 -3.12327 | overlap 418492 TGAATCTGATGCCTG GGGGC AAT GCCCC TGTTGCGTCTCAGAC TERM 437 418635 - 418653 + G 71 -7.4 -4.03234 | ATGGTCAACCGGTTA CGGATGAT AGC ACCATCCG TTTGTCTGGGCAGGG TERM 438 419601 - 419587 - g 74 -10 -3.45634 | AGTTGAACGAATTAA CCGCTA TTT TAGCGG ACACAAAGAAATGGA terA 418478 - 419662 + | putative tellurite resistance protein TERM 439 419874 - 419859 - g 81 -3.3 -5.42605 | GGAAGAAAAACAAAA GATGA TCATGT TCATC AAGCAGTCGCCTGAA TERM 440 419945 - 419935 - g 71 -6.8 -4.1552 | GAGTTCTTTAACAAA CTGG TTA CCAG CTATGAATTTGATGC terB 419695 - 420150 + | tellurite resistance protein terC 420172 - 421209 + | tellurite resistance protein terD 421273 - 421851 + | tellurium resistance protein TERM 441 421982 - 422006 + F 100 -12.3 -3.61268 | opp_overlap 421972 421984 ATTAACGTATTCATA TATTCAGGGCA AAA TGCTCTGAATA TTTAACACTTCAGTG terE 422035 - 422610 + | tellurium resistance protein TERM 442 422632 - 422650 + F 100 -12.4 -5.81412 | opp_overlap 422632 CCCGTTTCAATTAAA CCCTGCTG CAT CGGCAGGG TTTTTTTTCGCTCAA TERM 443 422650 - 422632 - f 86 -10.2 -3.90112 | opp_overlap 422632 CCCGTTTCAATTAAA CCCTGCTG CAT CGGCAGGG TTTTTTTTCGCTCAA YPTB0358 423323 - 423961 + | hypothetical protein TERM 444 424546 - 424558 + G 72 -10.5 -3.02013 | opp_overlap 424545 GTGAGAATATGGAAG CCCGG TGG CCGGG TATGGTTGTTAAACT YPTB0359 424212 - 426590 + | putative outer membrane fimbrial usher protein YPTB0360 426662 - 427405 + | putative periplasmic chaperone protein TERM 445 429041 - 429021 - g 73 -8.3 -3.88291 | opp_overlap 429021 GACGAGCTGGATAAA CGTAATCCG GGG CTGATTACG TTTACGCATTGCCCA TERM 446 430012 - 430029 + G 73 -8.3 -3.79138 | opp_overlap 430002, overlap 430016 430018 ATTTACTGGGGTTCA CCCCCGG GCAG CAGGGGG TTTGCTGCGTGTATT YPTB0362 428763 - 430181 + | hypothetical protein TERM 447 430193 - 430183 - T 75 -3.2 -5.1471 | overlap 430192 ACGAGAAAAAATAAA TCCC AAA GAGA TGGCTTGCTATTTTA YPTB0363 430476 - 430201 - | hypothetical protein YPTB0364 431190 - 433247 + | putative oxidoreductase TERM 448 433276 - 433255 - T 74 -10.1 -3.14878 | overlap 433253 433258 GTCGTTAATCCAACA GGAGGTGCC GAGA GGCACCTCA GACTGCTGACAAACC TERM 449 433273 - 433258 - T 75 -10.4 -2.77791 | overlap 433255 433253 GTTAATCCAACAGGA GGTGCC GAGA GGCACC TCAGACTGCTGACAA TERM 450 433362 - 433336 - T 84 -10.1 -3.82218 | gap 1, opp_overlap 433345, overlap 433337 433352 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 451 433363 - 433337 - T 72 -10.1 -2.88849 | gap 1, opp_overlap 433345, overlap 433336 433352 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT YPTB0365 437385 - 433591 - | putative autotransporter protein TERM 452 434815 - 434835 + g 72 -11.1 -2.50816 | overlap 434814 GTTCACCCGGACCGA GGTGGTGCC GGT GGCATCGCC GTTGATCACTAACCG TERM 453 437137 - 437173 + g 75 -8 -4.21933 | overlap 437139 ACCGGGCCGGGTCTC AACGGCGATATCCGTG CCGAA CAGGGATATCGCGGTG TTATTTTCACCTTCG TERM 454 437139 - 437171 + g 79 -10.6 -3.70108 | overlap 437137 CGGGCCGGGTCTCAA CGGCGATATCCGTG CCGAA CAGGGATATCGCGG TGTTATTTTCACCTT TERM 455 437635 - 437647 + H 70 -2.7 -5.01823 | ATAAGACCCGGCTAA TTCTT TGT AGGAA TTTTCTTGTTATTGT TERM 456 438149 - 438161 + H 72 -7.7 -3.87925 | CGGGTACCTATTCTG CGCTA CAA TAGCG TTCTGTTTACTAATT ubiC 438217 - 438741 + | chorismate pyruvate lyase ubiA 438907 - 439773 + | 4-hydroxybenzoate octaprenyltransferase TERM 457 439887 - 439865 - T 100 -10.6 -5.09426 | opp_overlap 439865 439885 GGTAATGGTAAAAAA TGGCCGGA TAATGAG TCCGGCCA TTGTTATGGTATTCA TERM 458 439865 - 439887 + T 95 -11.3 -3.89291 | opp_overlap 439865, overlap 439885 GGTAATGGTAAAAAA TGGCCGGAT AATGA GTCCGGCCA TTGTTATGGTATTCA TERM 459 439907 - 439927 + T 93 -12.5 -3.0644 | opp_overlap 439908, overlap 439913 TATGGTATTCAGAAA ACCCCCTGC TAG GCAGGGGGC TGTTAAGCATTGAGT TERM 460 439926 - 439908 - T 100 -16 -4.42653 | opp_overlap 439907 439913 ATGGTATTCAGAAAA CCCCCTGC TAG GCAGGGGG CTGTTAAGCATTGAG pslB 442458 - 439954 - | glycerol-3-phosphate acyltransferase TERM 461 442379 - 442394 + g 77 -6.8 -4.57341 | TCAGAGACCGGATCT GCAGGG ATAA CCTTGC TTTTTACCAACAATT TERM 462 442500 - 442510 + H 71 -6.8 -4.18401 | opp_overlap 442500 TTCGTCGCAAGGATA CCAG AAA CTGG TTTTGAGATCTGTGG TERM 463 442737 - 442754 + G 73 -3.3 -4.84642 | CCTTCTGGTTGGATG TGGGTGC CATA GCGCGCA TTTTATTAATTTGCA dgkA 442586 - 442957 + | diacylglycerol kinase TERM 464 443500 - 443488 - g 71 -4.8 -4.52589 | TGGCGGTACATAAAA CGCA GGATG TGCG TAATGGGCAAGTTGT lexA 443082 - 443690 + | LexA repressor TERM 465 443717 - 443745 + T 78 -9 -3.88015 | gap 1, opp_overlap 443720, overlap 443718 443720 TTCCTCCCGGAATAA TA-AGCCGTGCCT GTTG AGGTACGGCTCTA TTTCATGATTCTCTA TERM 466 443718 - 443743 + T 78 -9.7 -3.51793 | opp_overlap 443720, overlap 443717 443720 TCCTCCCGGAATAAT AAGCCGTGCCT GTTG AGGTACGGCTC TATTTCATGATTCTC TERM 467 443741 - 443720 - T 86 -10.1 -3.9461 | opp_overlap 443718 443717 443720 CTCCCGGAATAATAA GCCGTGCCT GTTG AGGTACGGC TCTATTTCATGATTC TERM 468 443720 - 443741 + T 95 -12.3 -3.32233 | opp_overlap 443720, overlap 443718 443717 CTCCCGGAATAATAA GCCGTGCCT GTTG AGGTACGGC TCTATTTCATGATTC YPTB0371 444408 - 443899 - | zinc uptake transcriptional repressor TERM 469 444351 - 444385 + g 95 -12.2 -4.36411 | TCAGCCGGACGTTTC GTTGTTGGCACAGGCT TTC AGCTTGTGCGAGCAGC TTTTCCTGATTGATA YPTB0372 444663 - 445700 + | tRNA-dihydrouridine synthase A TERM 470 445810 - 445843 + F 100 -15.5 -3.13908 | overlap 445804 TTCGGCAAATTGGGC CCCCGAATTATTTAC TGGC GTAAGTGATTCGGGG TTCACTCATTCACTT pspG 446216 - 446434 + | phage shock protein G TERM 471 446637 - 446621 - T 71 -3 -5.03994 | gap 1, opp_overlap 446629, overlap 446623 TGTTAGAGATAAAAA TAGCCGT ATAA ACGGC-A CGTTCATTTACGTGA TERM 472 446636 - 446623 - T 76 -8.1 -4.14422 | opp_overlap 446629, overlap 446621 TTAGAGATAAAAATA GCCGT ATAA ACGGC ACGTTCATTTACGTG TERM 473 446740 - 446713 - T 89 -12.7 -2.78395 | opp_overlap 446713, overlap 446705 446704 446715 446717 AAGAAAGTGTAATGA CAGAGGGCTCC TTAATC GGGGCCCTCTG TTTTTCAATCATGTA TERM 474 446713 - 446740 + T 100 -14.9 -4.69664 | opp_overlap 446713 446705 446704 446715 446717 AAGAAAGTGTAATGA CAGAGGGCTCC TTAATC GGGGCCCTCTG TTTTTCAATCATGTA TERM 475 446738 - 446715 - T 71 -9.5 -2.9296 | opp_overlap 446713, overlap 446713 446705 446704 446717 GAAAGTGTAATGACA GAGGGCTCC TTAATC GGGGCCCTC TGTTTTTCAATCATG qor 447762 - 446779 - | quinone oxidoreductase, NADPH-dependent TERM 476 446972 - 446994 + g 71 -2.6 -4.99134 | overlap 446976 TAGACATTCAGTGAA GGGCGGGT GACATAG ATCCCCCC TTTTTGGTTTAGAAT TERM 477 448745 - 448735 - g 70 -2.4 -4.84359 | TGATCTCGATAAAAA GACC GCT GGGC TACAAAAATCCGATC dnaB 448094 - 449500 + | replicative DNA helicase TERM 478 450223 - 450203 - g 73 -9.7 -3.28712 | opp_overlap 450191 CTGCGGTGGCCACAA GCGCACC GTGATTG GGTGCGC CCAGGGATTGTGCTG TERM 479 450380 - 450390 + G 71 -8.2 -3.727 | ACCTGGGTCAGTGAG CGCG ATA CGCG TTTAGGTGTGATCGC alr 449597 - 450676 + | alanine racemase tyrB 450862 - 452055 + | aromatic amino acid aminotransferase TERM 480 452162 - 452181 + F 72 -9.2 -3.18582 | overlap 452165 TTTTACGGCTTGCCG GTTCCCGC CGTC GCGGGTAC TTGGTCAATAACCTC TERM 481 452165 - 452178 + F 70 -9.5 -2.79098 | overlap 452162 TACGGCTTGCCGGTT CCCGC CGTC GCGGG TACTTGGTCAATAAC YPTB0378 452582 - 452941 + | hypothetical protein TERM 482 452995 - 453029 + T 74 -9.4 -3.35088 | gap 1, overlap 452997 ACGCTGAATGTCATA CC-CTCTGGAGCAAT ACATTG ATTGCCCCAGAGTGG TTCATTAAACGGTTT TERM 483 452997 - 453026 + T 77 -10.8 -2.84098 | overlap 452995 GCTGAATGTCATACC CTCTGGAGCAAT ACATTG ATTGCCCCAGAG TGGTTCATTAAACGG uvrA 455877 - 453034 - | excinuclease ABC subunit A ssb 456318 - 456866 + | single-strand DNA-binding protein TERM 484 456937 - 456956 + T 100 -15 -3.52073 | opp_overlap 456934 456935 ATTAGCTTTAAACGG CCGCGCCA CGGA TGGCGCGG TTCTAGTATTCAGGA YPTB0381 457428 - 457114 - | hypothetical protein YPTB0382 458590 - 457442 - | alcohol dehydrogenase rhaD 459481 - 458657 - | rhamnulose-1-phosphate aldolase TERM 485 459003 - 459016 + g 74 -3.8 -4.88067 | AACAGGCGCGTGAAG CTGG CGTTCT CCAG TTTTTGTACATAACT rhaA 460750 - 459494 - | L-rhamnose isomerase rhaB 462204 - 460747 - | rhamnulokinase TERM 486 462580 - 462561 - H 72 -9.2 -3.10164 | CTATCGAGGACTGAA GCAGGGCG ATTT CGCCGTGC CTGTCGAAAGAGGGC rhaS 462601 - 463422 + | transcriptional activator RhaS rhaR 463555 - 464427 + | transcriptional activator RhaR TERM 487 464510 - 464480 - T 86 -11.3 -3.25896 | gap 1, opp_overlap 464479, overlap 464483 CGATTAGCCATAAGA TAACGGGCAG-GTT TTTC AACGCTGCCCGTCA ATATCATCATCTTTA TERM 488 464507 - 464483 - T 88 -10.8 -3.76568 | gap 1, opp_overlap 464479, overlap 464480 TTAGCCATAAGATAA CGGGCAG-GTT TTTC AACGCTGCCCG TCAATATCATCATCT rhaT 465610 - 464576 - | rhamnose-proton symporter YPTB0389 465764 - 466054 + | hypothetical protein TERM 489 466454 - 466439 - T 89 -7.5 -5.05116 | opp_overlap 466439 466452 TTAGAAATAACAAAA CCCGC ACATTG GCGGG TTCGTTGACATTAAA YPTB0391 466915 - 466490 - | hypothetical protein YPTB0392 467145 - 467312 + | hypothetical protein YPTB0393 467327 - 469897 + | enhancing factor TERM 490 470319 - 470300 - T 100 -11.4 -4.84527 | opp_overlap 470299 470300 TCCAGATACGAAAAA GCCCCGCT TTGC AGCGAGGC CTTATAAATAATGGT TERM 491 470364 - 470380 + T 76 -10.9 -2.62616 | opp_overlap 470363 470361 470358 TCGAACCAAGGACAC GGGGATT TTC AATCCCC TGCTCTACCGACTGA YPTB0395 471126 - 470551 - | putative transcriptional regulator TERM 492 471219 - 471229 + H 71 -8.2 -3.42621 | opp_overlap 471207 ATAGCCCTATCTTTA CGGG CAC CCCG TTGTCGGTTGACGTT TERM 493 471674 - 471656 - g 79 -11.8 -3.14126 | opp_overlap 471655, overlap 471648 TGATAAACCGGAATA TTTCACCC CAC GGGTGAAA GTATTCAAAGGCGAT TERM 494 471987 - 471973 - g 73 -7.1 -4.2558 | CAGCCTGTATTAAAA CCTGC CCTAC GCAGG CTCTGACCTTGGTGG TERM 495 472053 - 472037 - g 83 -9.4 -4.35461 | overlap 472046 TCAACAGCAGCAAAA GCGCCA ACACA TGGCGC TGAATGAGCACAATG TERM 496 472135 - 472123 - g 78 -5.5 -4.87803 | CATCGTCAAATAAAA GCATC CGC GACGC AACACCGGTTAACCT YPTB0396 471546 - 473561 + | putative oxidoreductase Fe-S binding subunit hydN 473584 - 474141 + | 4Fe-4S ferrodoxin fdhF 474164 - 476311 + | formate dehydrogenase H TERM 497 476329 - 476371 + T 100 -8.3 -4.77173 | overlap 476331 TGTCGTGATTGAGCG TTGATTATGCCACGGCGAG ACCTA CTCGCCGTGGCGACAGCTA TTTATTTTGTAACCG TERM 498 476331 - 476369 + T 90 -10.9 -3.99938 | overlap 476329 TCGTGATTGAGCGTT GATTATGCCACGGCGAG ACCTA CTCGCCGTGGCGACAGC TATTTATTTTGTAAC dipZ 478160 - 476373 - | thiol:disulfide interchange protein precursor YPTB0400 478495 - 478136 - | divalent-cation tolerance protein CutA TERM 499 478274 - 478309 + g 74 -9.2 -3.75629 | gap 1 ATGGTCAGTATTGCT CTTGAACAAGAG-CTGA ACC TCATACTCTTGTTCGAG TTTACCTTCCCAGTA TERM 500 478601 - 478588 - R 71 -9.5 -2.91126 | overlap 478583 ACAAATCATACTATA CCCCG AAGC CGGGG CCAGCCAGAAGATGA TERM 501 478676 - 478645 - R 77 -10.2 -3.18511 | gap 1, overlap 478649 GAGAGATAGACCGAA GT-TATTGGGGCGCA TGA TGCGCCCCATCAGAC AGATTACAGAACCAG TERM 502 478671 - 478649 - R 91 -13.4 -2.56571 | overlap 478645 GATAGACCGAAGTTA TTGGGGCGCA TGA TGCGCCCCAT CAGACAGATTACAGA dcuA 479981 - 478680 - | anaerobic C4-dicarboxylate transporter TERM 503 479234 - 479248 + g 70 -10 -3.17229 | opp_overlap 479234, overlap 479232 GCGGCGTTTCAACGA GCCCAA CAC TTGGGC TGTTGATGATCGCAT TERM 504 480076 - 480048 - R 100 -10.4 -5.04601 | gap 2, opp_overlap 480052 GCCAGAAAGTAAAAA GGCACGC-TG-TCC AGA GGAGCATGCGTGCC TTAGAGGGCTACCGA aspA 481537 - 480101 - | aspartate ammonia-lyase fxsA 481985 - 482563 + | FxsA groES 482818 - 483111 + | co-chaperonin GroES TERM 505 483789 - 483779 - g 71 -6.8 -4.25056 | opp_overlap 483778 TACTTCATCAATAAA CCAG AAA CTGG CTCTATTGAACTTGA groEL 483158 - 484804 + | chaperonin GroEL TERM 506 484881 - 484912 + F 100 -16.8 -4.38154 | opp_overlap 484873 484886, overlap 484886 AGGTAAAGCTGTTGA TAAAAGCGAGTAGG GTGA CCTGCTCGCTTTTA TTTTGTGAAGACTGT TERM 507 484907 - 484886 - f 93 -10.1 -4.37658 | opp_overlap 484881 484886, overlap 484873 AAGCTGTTGATAAAA GCGAGTAGG GTGA CCTGCTCGC TTTTATTTTGTGAAG TERM 508 484886 - 484907 + F 100 -12.3 -5.18371 | opp_overlap 484873 484886, overlap 484881 AAGCTGTTGATAAAA GCGAGTAGG GTGA CCTGCTCGC TTTTATTTTGTGAAG YPTB0406 485440 - 485826 + | putative lipoprotein YPTB0407 487139 - 486111 - | hypothetical protein TERM 509 487283 - 487268 - g 77 -8.2 -4.1466 | opp_overlap 487267 487268 487270 AGCGAATTCGTAAAA CCCGGC AAAG GCCAGG CTTTTGCGCGTGTTA efp 487175 - 487741 + | elongation factor P TERM 510 488100 - 488114 + G 77 -4.2 -5.09762 | TTATTACCCTCGTCG CAATGG CTG CCAGTG TTTTTCTATTGGCCT sugE 487988 - 488302 + | quaternary ammonium compound-resistance protein SugE TERM 511 488441 - 488419 - T 100 -13.4 -4.0825 | overlap 488437 GCTTTAACCAAAGAA CGGCCTGCCA GAA CAGCAGGCCG CGAATACGGCATATG frdD 488823 - 488467 - | fumarate reductase subunit D frdC 489232 - 488840 - | fumarate reductase subunit C TERM 512 489173 - 489162 - G 73 -2.2 -5.10064 | overlap 489163 489171 CGCAACATATAAAAA CGGT AGAA ACCA AGCTGTTGCCACCAG frdB 489983 - 489249 - | fumarate reductase iron-sulfur subunit frdA 491799 - 489976 - | fumarate reductase flavoprotein subunit poxA 492257 - 493234 + | lysyl-tRNA synthetase TERM 513 493455 - 493429 - T 82 -5.9 -4.97405 | gap 1, opp_overlap 493431 493434, overlap 493431 ACTTACAAAAACAAA TACCCTG-ACCT GTGA AGGCGCAGGGCA TTTTTATTTCTTACT TERM 514 493434 - 493455 + T 91 -6.5 -5.48514 | opp_overlap 493431 493429, overlap 493431 CAAAAACAAATACCC TGACCTGTG AAGG CGCAGGGCA TTTTTATTTCTTACT BspA 496838 - 493479 - | hypothetical protein TERM 515 494562 - 494589 + g 72 -11.3 -2.71364 | gap 1, opp_overlap 494579 TTCCTCACCACGGGC GCGCTGCGC-GA GAATA TCGGCGCGGCGC TGCTTGGCGCGATCA TERM 516 494646 - 494612 - G 85 -12.3 -3.30701 | gap 1, opp_overlap 494612 494615, overlap 494607 494615 CGCGATCAAAGGCAA TACGCCGCCGCTGGAT CAGC ATCCAACGGCGG-ATA ATATGATAGACCACT TERM 517 494644 - 494615 - G 87 -14.3 -2.52602 | opp_overlap 494615 494612, overlap 494607 494612 GATCAAAGGCAATAC GCCGCCGCTGGAT CAGC ATCCAACGGCGGA TAATATGATAGACCA TERM 518 494615 - 494644 + g 78 -12.1 -2.66316 | opp_overlap 494607 494612 494615, overlap 494612 GATCAAAGGCAATAC GCCGCCGCTGGAT CAGC ATCCAACGGCGGA TAATATGATAGACCA TERM 519 495014 - 495004 - G 71 -4.6 -4.59109 | opp_overlap 495008, overlap 495008 GACAGGCGGTAAAAA CGCA TTG CGCG CGCAACTTGTGTTGG TERM 520 496151 - 496161 + g 80 -4.6 -5.04175 | overlap 496150 GCTGAGCCTGAACCC GTGC TTC GCGC TTTTTGTATAATTCG psd 497743 - 496862 - | phosphatidylserine decarboxylase TERM 521 497806 - 497778 - R 70 -5.8 -4.38141 | overlap 497780 CGTTAGATAAAATAA GGGGGCGCATTG TATCG CTCTGCGCCCAC CCTGTCAGACCCTTC YPTB0417 499120 - 498068 - | ribosome-associated GTPase TERM 522 499832 - 499849 + G 80 -6.3 -4.71776 | GTCAGTCGCCGAGCT TGCTTAC TATC GTGAGCA TTTTATTCAATCTTA YPTB0418 499320 - 499865 + | oligoribonuclease TERM 523 500390 - 500375 - Tf 70 -7.6 -3.73647 | CGTACCGATGAAGAA TTCGCA AGCA TGCGAA GACAGATTTAGTACA TERM 524 500466 - 500450 - Tf 76 -10.9 -2.62616 | TCAGTTGGTAGAGCA CGACCTT GCC AAGGTCG GGGTCGCGAGTTCGA TERM 525 500585 - 500555 - Tf 89 -7 -5.40464 | overlap 500556 CATCAGAAATAAAAA GTGTATAAATAACC AAT GGGTATTTATACAG GCGACGCGGGAATAG TERM 526 500584 - 500556 - Tf 86 -10.5 -3.82652 | overlap 500555 ATCAGAAATAAAAAG TGTATAAATAACC AAT GGGTATTTATACA GGCGACGCGGGAATA TERM 527 500633 - 500617 - Tf 76 -10.9 -2.62616 | TCAGTTGGTAGAGCA CGACCTT GCC AAGGTCG GGGTCGCGAGTTCGA TERM 528 500776 - 500760 - Tf 76 -10.9 -2.62616 | TCAGTTGGTAGAGCA CGACCTT GCC AAGGTCG GGGTCGCGAGTTCGA TERM 529 501036 - 501055 + TF 84 -2.9 -5.69262 | gap 1 ACTTGTGCTTTTTTT TGCACTTG ATTGC CAAG-GCA TTTTTATTTTTATGC YPTB0419 502356 - 501121 - | putative iron-sulfur cluster-binding protein TERM 530 502058 - 502075 + gF 75 -8.5 -3.86202 | opp_overlap 502061, overlap 502061 GCATAGCGGCTGACA TAACCCA ATTC TGGGTTA TTTAATGTACTGGCA TERM 531 502184 - 502202 + gF 82 -10.3 -3.59087 | GCACGCAGCATACCG TGGCGTG CCATC CACGCCA TTTCGCCATGATATT TERM 532 502280 - 502262 - Gf 71 -8.2 -3.53012 | opp_overlap 502261 TCTTCCGCCGTCAAA TCGGTATC GCA AATACCGA CTTGCTGGAAACCTA TERM 533 503411 - 503399 - gH 80 -9.1 -3.97602 | CAACAGAGTGATAAA CCCAC ATT GTGGG ATGCGGATGCACTTA YPTB0420 502355 - 503869 + | hypothetical protein YPTB0421 503880 - 504350 + | putative ATPase TERM 534 504778 - 504764 - g 72 -5.7 -4.36433 | CGAAAGATGAACAAA GTACC CGCCT GGTAC TGGAACTGACGCAGA TERM 535 504827 - 504803 - g 74 -2.8 -5.04601 | gap 1 CGCAGAAAGTAAAAA CCCGTGCTGTC ACCC AACAGT-CGGG CAATAACTACACGGT TERM 536 506074 - 506060 - g 75 -11.4 -2.72511 | overlap 506059 GCCAGCGGTTGAAAG TGCCCG CGT CGGGCA GTACGGTAACGGCAG YPTB0422 504490 - 506271 + | putative N-acetylmuramoyl-L-alanine amidase-family protein mutL 506287 - 508194 + | DNA mismatch repair protein TERM 537 508688 - 508706 + G 100 -3.9 -6.23545 | gap 1, opp_overlap 508687 508686, overlap 508691 AATGATCCCCAAAGG CTCTCCAG AGCA CTGGA-AG TTTTTTTTATTTCAG miaA 508187 - 509128 + | tRNA delta(2)-isopentenylpyrophosphate transferase hfq 509245 - 509550 + | RNA-binding protein Hfq hflX 509649 - 510935 + | putative GTPase HflX TERM 538 511348 - 511335 - g 76 -2.3 -5.19261 | AAACTGAGCAAAAAA CTGAG TAGC CTCGG TGGCAAAGGTAGCGG hflK 511176 - 512438 + | FtsH protease regulator HflK hflC 512442 - 513446 + | FtsH protease regulator HflC TERM 539 513560 - 513578 + F 95 -9.5 -4.43213 | TGAACGTAACACCGA GGCCCGT CTAGT GCGGGCC TTTTCATGTGTTGAA YPTB0429 513618 - 513818 + | hypothetical protein TERM 540 514288 - 514278 - g 77 -6.8 -4.57341 | AATGCGCGTGAAAAA GCAC GTG GTGC AAAAGCTATCGGTAC TERM 541 514430 - 514407 - g 79 -10.4 -3.67976 | opp_overlap 514423, overlap 514411 514424 GCTATCAAGCTGAAA GAAATTGTGG AATA CCACAACTTC CAGTTGGTGCATTAC TERM 542 514426 - 514411 - g 78 -7.6 -4.46233 | opp_overlap 514423, overlap 514407 514424 TCAAGCTGAAAGAAA TTGTGG AATA CCACAA CTTCCAGTTGGTGCA TERM 543 514662 - 514646 - g 72 -10.1 -3.06796 | overlap 514648 TGTCACCTCATCTAA CACCACC GCG GGTGGCG TAGCGACAGGCTCTG purA 513918 - 515216 + | adenylosuccinate synthetase TERM 544 515303 - 515332 + F 100 -15.9 -2.80816 | opp_overlap 515303 515306 515310, overlap 515306 515310 TATTTGTGTTCGAAA CAATAAACCGGGC TGAT GTCCGGTTTATTG TCTAATACATCCAGC TERM 545 515332 - 515303 - f 100 -13.7 -3.53224 | opp_overlap 515303 515306 515310, overlap 515306 515310 TATTTGTGTTCGAAA CAATAAACCGGGC TGAT GTCCGGTTTATTG TCTAATACATCCAGC TERM 546 515306 - 515329 + F 91 -11.8 -3.55447 | opp_overlap 515303 515306 515310, overlap 515303 515310 TTGTGTTCGAAACAA TAAACCGGGC TGAT GTCCGGTTTA TTGTCTAATACATCC TERM 547 515329 - 515306 - f 81 -9.6 -3.90744 | opp_overlap 515306 515303 515310, overlap 515303 515310 TTGTGTTCGAAACAA TAAACCGGGC TGAT GTCCGGTTTA TTGTCTAATACATCC TERM 548 515310 - 515325 + F 87 -8.2 -4.41114 | opp_overlap 515306 515303 515310, overlap 515306 515303 GTTCGAAACAATAAA CCGGGC TGAT GTCCGG TTTATTGTCTAATAC TERM 549 515325 - 515310 - f 73 -6 -4.56978 | opp_overlap 515310 515306 515303, overlap 515306 515303 GTTCGAAACAATAAA CCGGGC TGAT GTCCGG TTTATTGTCTAATAC TERM 550 516000 - 516031 + G 85 -5.1 -5.30155 | overlap 516004 GGTTAAAGATAATTC CCCGCTCTACAAG CTATTA CTTGTTGAGTAGG TTTTTTACTTAATAA YPTB0431 515605 - 516030 + | transcriptional repressor NsrR TERM 551 517674 - 517685 + G 76 -7.2 -4.36914 | opp_overlap 517673 GATTCTGGCGAATAT CGCG GCGG CGCG TTTTGTGGAAAAACA TERM 552 518616 - 518602 - g 100 -9.2 -4.82901 | GCGGGTGGACAAAAA CGCCCA CGT CGGGCG AAAAAACCGGTAAAC rnr 516271 - 518805 + | exoribonuclease R TERM 553 518839 - 518863 + F 74 -10 -3.08072 | gap 1 TGGTGGTGTGCTACT TGCCGGGCGGC TTTT GTCGCCCG-CA TATAATTTAATTATT YPTB0433 518924 - 519664 + | 23S rRNA (guanosine-2'-O-)-methyltransferase TERM 554 519742 - 519721 - f 75 -8.8 -3.60098 | ACTCCGCAGCCTAAA GCCAACAT CTTTGT ATGTTGGC TCAGACTGCTGACAA TERM 555 519831 - 519805 - f 84 -10.1 -3.82218 | gap 1, opp_overlap 519814, overlap 519806 519821 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 556 519832 - 519806 - f 72 -10.1 -2.88849 | gap 1, opp_overlap 519814, overlap 519805 519821 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT TERM 557 519911 - 519932 + F 71 -3 -5.08088 | opp_overlap 519912, overlap 519912 TGTCAATAACCTCAA ACCAACAT CTTTGT ATGTTGGC TTTTTGTTGGGAATT aidB 520072 - 521715 + | isovaleryl CoA dehydrogenase YPTB0435 522136 - 521825 - | putative lipoprotein rjfP 522327 - 523076 + | esterase YPTB0437 523151 - 523429 + | hypothetical protein TERM 558 523788 - 523763 - g 71 -9.1 -3.50832 | gap 1, overlap 523755 523761 GGTTAAAGCGAAAGA CGAACGCCGTGA GCG TCACGAC-TTCG CGTCAGAAGCCAATG rpsF 523443 - 523835 + | 30S ribosomal protein S6 priB 523841 - 524161 + | primosomal replication protein N rpsR 524166 - 524393 + | 30S ribosomal protein S18 rplI 524433 - 524885 + | 50S ribosomal protein L9 TERM 559 524906 - 524934 + T 100 -14 -3.29312 | opp_overlap 524911, overlap 524911 GCGGCTGTAACCTGT TAAAACGCCAGC CTAGT GCTGGCGTTTTG CTTTTGGTTATCGGT TERM 560 524929 - 524911 - T 100 -11.7 -4.11484 | opp_overlap 524911 524906 TGTAACCTGTTAAAA CGCCAGC CTAGT GCTGGCG TTTTGCTTTTGGTTA TERM 561 524911 - 524929 + T 100 -11.7 -4.72729 | opp_overlap 524911, overlap 524906 TGTAACCTGTTAAAA CGCCAGC CTAGT GCTGGCG TTTTGCTTTTGGTTA YPTB0442 525406 - 524951 - | hypothetical protein YPTB0443 526286 - 525546 - | hypothetical protein fklB 526650 - 527270 + | peptidyl-prolyl cis-trans isomerase TERM 562 527288 - 527320 + T 100 -20 -4.44046 | opp_overlap 527295, overlap 527289 CTTTGGTACCGATTA TGCCAAAGGGCGAC AGGGG GTCGCCCTTTGGCG TTTATTTACGATAAG TERM 563 527289 - 527319 + T 100 -21.3 -3.25946 | opp_overlap 527295, overlap 527288 TTTGGTACCGATTAT GCCAAAGGGCGAC AGGGG GTCGCCCTTTGGC GTTTATTTACGATAA TERM 564 527313 - 527295 - T 90 -11.7 -3.62275 | opp_overlap 527289 527288 ACCGATTATGCCAAA GGGCGAC AGGGG GTCGCCC TTTGGCGTTTATTTA YPTB0445 528033 - 527368 - | cell morphogenesis/cell wall metabolism regulator TERM 565 528093 - 528061 - R 83 -11.6 -3.02096 | opp_overlap 528061, overlap 528068 TTGAGTAATTATACA TCTATAACATGCAT AATAA ATACATGTTATAGA TTGTGATATAACTCC TERM 566 528061 - 528093 + r 76 -9.4 -3.47573 | opp_overlap 528061 528068 TTGAGTAATTATACA TCTATAACATGCAT AATAA ATACATGTTATAGA TTGTGATATAACTCC cpdB 530132 - 528162 - | bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein TERM 567 530315 - 530344 + H 76 -9.5 -3.49169 | opp_overlap 530313, overlap 530314 GATTTTATAAGTACT TTCCTGACAAATA TGGC TATTTATCAGGAA TATTATTAGTCTTCA cysQ 530581 - 531324 + | PAPS (adenosine 3'-phosphate 5'-phosphosulfate) 3'(2'),5'-bisphosphate nucleotidase TERM 568 531344 - 531372 + T 100 -15.3 -2.84812 | opp_overlap 531341 531342, overlap 531333 ATTGCTGCACAAGTT GGTGCAGTTGGTC GAT GACCTGCTGCACC TCTGCTGATGTCAGT YPTB0448 531890 - 531327 - | hypothetical protein YPTB0449 532226 - 532438 + | hypothetical protein TERM 569 532509 - 532484 - T 77 -10.4 -3.14468 | opp_overlap 532487, overlap 532487 CCTGAGCAGATTTAA TCACGGCCCC AACTCA GGGGCCGTTA TGTTTACCGTGATCA TERM 570 532487 - 532506 + T 100 -12.1 -3.82946 | opp_overlap 532487 532484 GAGCAGATTTAATCA CGGCCCC AACTCA GGGGCCG TTATGTTTACCGTGA TERM 571 532506 - 532487 - T 83 -12.1 -2.77658 | opp_overlap 532487, overlap 532484 GAGCAGATTTAATCA CGGCCCC AACTCA GGGGCCG TTATGTTTACCGTGA YPTB0450 533877 - 532546 - | CorC/HlyC family transporters TERM 572 533226 - 533211 - G 73 -7.6 -4.12738 | GTAGATCAAAGTAAA TCACGT TTTC ACGTGA AGTCATGGAGGAAGG msrA 534793 - 534155 - | methionine sulfoxide reductase A TERM 573 534278 - 534304 + g 83 -7.3 -4.68424 | GGCAACCGTAATTTC GCTGGTAATCA CCCGT TGATCACCGGC TTTTTCCATGGCTTG YPTB0452 535068 - 536804 + | hypothetical protein YPTB0453 536801 - 540739 + | hypothetical protein YPTB0454 540742 - 541098 + | hypothetical protein TERM 574 541191 - 541140 - T 100 -9.4 -5.84381 | gap 1, opp_overlap 541140 541157 GCAGTAACAAAAAAA CACCGCACAAGGTAAAC-GGCCCTA TTT TGGGGCCTGTTCACGATAGGCGGTG TTTTTTTATAGGCGA TERM 575 541140 - 541191 + T 100 -7.2 -5.60993 | gap 1, opp_overlap 541140, overlap 541157 GCAGTAACAAAAAAA CACCGCACAAGGTAAAC-GGCCCTA TTT TGGGGCCTGTTCACGATAGGCGGTG TTTTTTTATAGGCGA TERM 576 541157 - 541173 + T 73 -10.1 -3.04144 | opp_overlap 541140, overlap 541140 CCGCACAAGGTAAAC GGCCCTA TTT TGGGGCC TGTTCACGATAGGCG ppa 541743 - 541216 - | inorganic pyrophosphatase TERM 577 541903 - 541883 - R 100 -11.1 -5.72622 | opp_overlap 541876 541883 GTTAGAAATAAAAAA CAGCGGCTT AAA AGGCCGCTG TTAGCTTATTTTTGA TERM 578 541883 - 541903 + r 100 -13.3 -3.40836 | opp_overlap 541883, overlap 541876 GTTAGAAATAAAAAA CAGCGGCTT AAA AGGCCGCTG TTAGCTTATTTTTGA fbp 542956 - 541943 - | fructose-1,6-bisphosphatase TERM 579 541992 - 542002 + g 73 -5.4 -4.63218 | AACCCTTCCGCATCT TCCA CCA TGGA TTTTGTTCCCACGAA TERM 580 542681 - 542671 - G 75 -5.4 -4.72272 | opp_overlap 542671 542669 TTCCGCCATCAAAAA TGAC AAT GTCA TCTTCTTCTTCGGAG mpl 543127 - 544512 + | UDP-N-acetylmuramate:L-Ala-D-Glu-meso-diaminopime late ligase TERM 581 544614 - 544591 - T 85 -9.6 -4.12188 | overlap 544593 TCATCATCTTGAAAA TATGCCCCAT GTTA ATGGGGCATT GCAGACTGCTGACAA TERM 582 544612 - 544593 - T 93 -12.2 -3.6581 | overlap 544591 ATCATCTTGAAAATA TGCCCCAT GTTA ATGGGGCA TTGCAGACTGCTGAC TERM 583 544703 - 544677 - T 84 -10.1 -3.82218 | gap 1, opp_overlap 544686, overlap 544678 544693 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 584 544704 - 544678 - T 72 -10.1 -2.88849 | gap 1, opp_overlap 544686, overlap 544677 544693 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT YPTB0458 545071 - 544808 - | hypothetical protein TERM 585 545413 - 545431 + r 75 -7.4 -4.3129 | opp_overlap 545413 GCGAGGGTGAGATAA TGCGGC ACATAAG GCCGCA TTTTACTGCTCGGTG argR 545930 - 545460 - | arginine repressor mdh 546394 - 547332 + | malate dehydrogenase TERM 586 547382 - 547397 + T 74 -10.4 -2.59431 | overlap 547378 CTGCAAGCGTTACTC GGCCCA TCCA TGGGCC TCGCTTCTGCGAGGC TERM 587 547668 - 547636 - T 95 -7.8 -5.08178 | opp_overlap 547636 ATATAGAGATAAAAA GGGGCTACTG AAAAGAGTACGAA CAGTAGCCCC TGATATTGTAATGAT sfsB 548041 - 547766 - | putative DNA-binding protein TERM 588 548174 - 548184 + G 74 -2.6 -5.16969 | CAAAAAATTTAAATG TTTT CTA AAAA TTTCTTTTTTGTGTC YPTB0462 548171 - 548572 + | hypothetical protein TERM 589 548641 - 548623 - T 89 -10.3 -3.93236 | opp_overlap 548623 CATTAATGGGATAAA CCCGGAT GGTGA ATCCGGG TTTCTAAATAATTTC TERM 590 548623 - 548641 + T 89 -10.3 -3.96224 | opp_overlap 548623 CATTAATGGGATAAA CCCGGAT GGTGA ATCCGGG TTTCTAAATAATTTC ispB 549640 - 548669 - | octaprenyl diphosphate synthase rplU 549900 - 550211 + | 50S ribosomal protein L21 rpmA 550231 - 550488 + | 50S ribosomal protein L27 TERM 591 550517 - 550539 + F 100 -12 -4.84529 | opp_overlap 550517 TGTAAATAGATGTAA GCCCTGCAAT TTC GTTGCGGGGC TTTTTACATTTCTGG TERM 592 551539 - 551514 - g 77 -6.9 -4.62441 | gap 1, opp_overlap 551510, overlap 551515 TCGGACAGAAATAAA CCTGGTTGCTTT GCA AAAGCAGCC-GG TGAATGATTTACGGA YPTB0466 550576 - 551562 + | DMT family amino acid efflux protein obgE 551563 - 552735 + | GTPase ObgE TERM 593 552757 - 552788 + T 100 -9.5 -5.0133 | CAGTTATTCTTTGAA TAAGGGCTGCCAT TTTTTC GTGGTGGCCCTTA TTTTTTGGCAGGGTG basS 553897 - 552830 - | sensor protein BasS/PmrB basR 554556 - 553894 - | DNA-binding transcriptional regulator BasR dacB 556010 - 554562 - | D-alanyl-D-alanine carboxypeptidase/endopeptidase TERM 594 555061 - 555080 + g 73 -2.2 -5.03715 | gap 1 GTTCTGAAGACGGTG TCAG-CGAT CAT ATTGTCTGA TTTTTTCAGCATGAT TERM 595 556417 - 556402 - g 74 -4 -4.88918 | gap 1, overlap 556411 CGACTTGAAAGAAAA TGCG-GA ATA TCACGCA GCCCGTGAGCAACAA greA 556268 - 556744 + | transcription elongation factor GreA TERM 596 556830 - 556805 - T 100 -10.5 -4.88405 | opp_overlap 556811, overlap 556806 AAGTTGTAAAGAAAA GTAAAAGGCCG CAAG CGGCCTTTTAT CAGAACAAAGTGCAT TERM 597 556829 - 556806 - T 100 -14 -3.51958 | opp_overlap 556811, overlap 556805 AGTTGTAAAGAAAAG TAAAAGGCCG CAAG CGGCCTTTTA TCAGAACAAAGTGCA TERM 598 556811 - 556824 + T 88 -9.5 -4.36914 | opp_overlap 556806 556805 TAAAGAAAAGTAAAA GGCCG CAAG CGGCC TTTTATCAGAACAAA TERM 599 556850 - 556840 - T 74 -6.8 -4.35483 | opp_overlap 556839 556840 TTTTATCAGAACAAA GTGC ATG GCAC CTTTCTCTAAAACAA YPTB0472 557165 - 556872 - | hypothetical protein rrmJ 557312 - 557941 + | 23S rRNA methyltransferase J TERM 600 558086 - 558104 + G 73 -8.2 -3.83205 | GCGAATCGAATGGCC GTAGAGTG GAT TACTCTAC TTTCATGTCCGACGT hflB 557998 - 559932 + | ATP-dependent metalloprotease TERM 601 559976 - 559993 + F 100 -11.3 -5.84381 | opp_overlap 559976 TTGTGACTAATATAA CCCTAGG CTTG CCTAGGG TTTTTTTGTTGCTAA TERM 602 559993 - 559976 - f 90 -11.3 -3.71284 | opp_overlap 559976 TTGTGACTAATATAA CCCTAGG CTTG CCTAGGG TTTTTTTGTTGCTAA folP 560052 - 560885 + | dihydropteroate synthase TERM 603 561784 - 561794 + G 71 -6.8 -4.24342 | opp_overlap 561783 TAGCCCTGAAAGATC TGGG TAT CCCA TTTGTTCGTGCCAAA glmM 560895 - 562235 + | phosphoglucosamine mutase TERM 604 562268 - 562248 - f 83 -11.1 -3.53761 | TAACCCTTTTTTAAA GGGGGAGAG GCA CTCTTCCCC AAGAAATTACGCTGA secG 562458 - 562793 + | preprotein translocase subunit SecG TERM 605 562873 - 562843 - f 74 -9.9 -3.08603 | opp_overlap 562841, overlap 562842 AAAGAGTTTTAAAAG GGTTGTTGTTACT TGGAC AGTAAAAACAACC AGTTGAATCAGTGCC TERM 606 563108 - 563122 + F 100 -7.2 -5.79526 | opp_overlap 563110 TCCGGCCCCCGCAAC CACTTT CCT AAAGTG TTTTTTTTCAAATGT TERM 607 563220 - 563208 - f 76 -10.5 -3.06501 | GAGAGTTGCACCGAA GCCGC TTT GCGGC AAACAGGGTCCAGTT TERM 608 563237 - 563265 + F 100 -12.5 -3.90744 | opp_overlap 563243 563244, overlap 563244 AACAGGGTCCAGTTG CATAAAGCCCCGA ATT TCGGGGTTTTTTG TTATTTGACAGCAGA TERM 609 563259 - 563243 - f 72 -7.9 -3.87815 | opp_overlap 563237 563244, overlap 563244 GTCCAGTTGCATAAA GCCCCGA ATT TCGGGGT TTTTTGTTATTTGAC TERM 610 563258 - 563244 - f 83 -11.4 -2.92475 | opp_overlap 563237 563244, overlap 563243 TCCAGTTGCATAAAG CCCCGA ATT TCGGGG TTTTTTGTTATTTGA TERM 611 563244 - 563258 + F 100 -11.4 -5.72254 | opp_overlap 563244 563243, overlap 563237 TCCAGTTGCATAAAG CCCCGA ATT TCGGGG TTTTTTGTTATTTGA TERM 612 563287 - 563300 + F 100 -8.1 -5.80248 | GACAGCAGAATCACT GGGCT ATTA AGCCC TTTTTTTATGTCTTG YPTB0478 563325 - 563777 + | hypothetical protein nusA 563799 - 565286 + | transcription elongation factor NusA TERM 613 565820 - 565807 - g 77 -3.1 -5.19261 | AAACCGACGAAAAAA CTAAG CCAG CTCAG ACCGATAAAGCACGT infB 565311 - 567989 + | translation initiation factor IF-2 TERM 614 568041 - 568010 - f 81 -10.8 -3.36515 | opp_overlap 568013, overlap 568008 568011 TCTGATTTGCAAATA TCCATTTGGGGGGC CTTG GCCCCCCAAACTGT CTGGAGAATCCAAAT TERM 615 568040 - 568011 - f 95 -14.3 -2.61695 | opp_overlap 568013, overlap 568010 568008 CTGATTTGCAAATAT CCATTTGGGGGGC CTTG GCCCCCCAAACTG TCTGGAGAATCCAAA TERM 616 568013 - 568038 + F 93 -13.3 -2.87931 | opp_overlap 568011 568010 568008 GATTTGCAAATATCC ATTTGGGGGGC CTTG GCCCCCCAAAC TGTCTGGAGAATCCA rbfA 568055 - 568465 + | ribosome-binding factor A truB 568465 - 569439 + | tRNA pseudouridine synthase B TERM 617 569453 - 569436 - f 91 -6.9 -5.56263 | opp_overlap 569439, overlap 569439 AGTAGAAAATAAAAA GTAGGCC ACAC GGCCTGC CTTGCGATCCCGCGA rpsO 569561 - 569830 + | 30S ribosomal protein S15 TERM 618 569852 - 569868 + F 100 -13.7 -5.24531 | opp_overlap 569852 GAGTTTCGGGAGAAA GGGGCCA AGT TGGCCCC TTTTTTCTAAGAAGT TERM 619 569868 - 569852 - f 100 -13.7 -3.86015 | opp_overlap 569852 GAGTTTCGGGAGAAA GGGGCCA AGT TGGCCCC TTTTTTCTAAGAAGT pnp 570094 - 572208 + | polynucleotide phosphorylase/polyadenylase TERM 620 572220 - 572251 + F 100 -13.8 -3.48276 | opp_overlap 572217 GTAATTAAGTCATTC CACAGCTCCTTGCT CATC GGTAAGGGGCTGTG TTATCTCAGGGGCGG TERM 621 573097 - 573085 - g 74 -9.1 -3.78934 | opp_overlap 573084 TCTGGGGGACAAGAA CACCG CTT CGGTG CTGTTCAAACTGACG nlpI 572333 - 573217 + | lipoprotein NlpI TERM 622 574195 - 574177 - g 71 -3.8 -4.7497 | CGTACGTACCAAAAA TGCGACCT TGG AAGTAGCA GAAGCCCTTGAGCGT deaD 573404 - 575398 + | ATP-dependent RNA helicase DeaD TERM 623 575435 - 575450 + G 100 -10.4 -5.65177 | opp_overlap 575435 GATTAAACGTAAAAA CCAGCC TTCG GGCTGG TTTTTTTATGGCTAT TERM 624 575450 - 575435 - g 100 -10.4 -4.82855 | opp_overlap 575435 GATTAAACGTAAAAA CCAGCC TTCG GGCTGG TTTTTTTATGGCTAT YPTB0487 575418 - 575591 + | hypothetical protein YPTB0488 575634 - 576002 + | hypothetical protein YPTB0489 576026 - 576337 + | putative transcriptional regulatory protein TERM 625 576369 - 576354 - T 100 -10.4 -4.82855 | GATTAAACGTAAAAA CCAGCC TTCG GGCTGG TTCAGACTGCTGACA TERM 626 576459 - 576433 - T 84 -10.1 -3.82218 | gap 1, opp_overlap 576442, overlap 576434 576449 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 627 576460 - 576434 - T 72 -10.1 -2.88849 | gap 1, opp_overlap 576442, overlap 576433 576449 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT TERM 628 576555 - 576540 - T 82 -10.4 -3.72051 | opp_overlap 576540 GTCAACAACCTCAAA CCAGCC TTCG GGCTGG TTTTTTTATGGCTGT TERM 629 576540 - 576555 + T 100 -10.4 -5.65177 | opp_overlap 576540 GTCAACAACCTCAAA CCAGCC TTCG GGCTGG TTTTTTTATGGCTGT YPTB0490 577647 - 576592 - | hypothetical protein TERM 630 578570 - 578538 - g 70 -2 -4.9138 | ATTAGCCAAAGAAAA TGGTGTGTC-GCAGCA AGA TGCTGATGACGC-CCA AACCAGCTATCAGCA TERM 631 578622 - 578612 - g 73 -2.4 -5.00884 | opp_overlap 578613 ATGTGGCCGAAAAAA CTGC TGC GCTG GAAACGGCGCGTATC YPTB0491 578155 - 579315 + | multidrug efflux protein membrane fusion protein TERM 632 580985 - 580998 + G 75 -5.9 -4.65895 | GTGTGTTGTTTATTC GCCTG CCAA CGGGC TTTTTACCTACCGAA YPTB0492 579319 - 582444 + | RND family multidrug efflux protein TERM 633 582723 - 582689 - g 88 -13.6 -3.1247 | gap 1 ATTGCCGATATCGAA GCGGCCCG-TGCGCA ATATGG TGTGCAACGGGCCGC CCAGCTACCAACGGT TERM 634 582894 - 582876 - g 80 -3 -5.41143 | opp_overlap 582876 582879, overlap 582877 TATTTGGTAAAAAAA GCAGCTTG TCT CATGCTGA ATTTGAAACCTATCT ibeB 582446 - 583852 + | OMF family outer membrane multidrug efflux lipoprotein TERM 635 583977 - 583933 - T 100 -16 -4.183 | gap 1, opp_overlap 583939 583942, overlap 583939 TTAAGCGTTAATAAA CATG-AATAACAGGGAGGCCA GCAA TGACCTCCCTGTTATTACTTG ATAAGGCAAGGCTGT TERM 636 583939 - 583970 + T 100 -16 -3.39895 | opp_overlap 583933 583939, overlap 583942 GTTAATAAACATGAA TAACAGGGAGGCCA GCAA TGACCTCCCTGTTA TTACTTGATAAGGCA TERM 637 583970 - 583939 - T 100 -18.2 -3.54382 | opp_overlap 583939 583942, overlap 583933 GTTAATAAACATGAA TAACAGGGAGGCCA GCAA TGACCTCCCTGTTA TTACTTGATAAGGCA TERM 638 583942 - 583967 + T 100 -13.3 -3.83844 | opp_overlap 583939 583933, overlap 583939 AATAAACATGAATAA CAGGGAGGCCA GCAA TGACCTCCCTG TTATTACTTGATAAG YPTB0494 584871 - 583993 - | hypothetical protein YPTB0495 585878 - 584883 - | putative protease TERM 639 585835 - 585809 - G 71 -7.3 -4.11295 | gap 1, opp_overlap 585808 585807, overlap 585799 TCAAACCGATATAAA CCGC-ATCGGCA CCAT TGTCGATTGCGG CCTTTAATGCAGGTA YPTB0496 586194 - 586715 + | putative lipid carrier protein YPTB0497 586709 - 587212 + | putative acetyltransferase YPTB0498 587674 - 587387 - | GIY-YIG nuclease superfamily protein TERM 640 587422 - 587438 + g 93 -8 -5.32396 | TTGTCAATAACCTCG GCTGGT CAATC ACCAGC TTTTCTTTTTGCTGT YPTB0499 589920 - 587902 - | hypothetical protein TERM 641 588077 - 588063 - G 75 -5.6 -4.75174 | overlap 588065 CATTCAAGTCAAAAA CACAGG TGA CCTGAG CTGCTGGTTGTTGGT YPTB0500 591170 - 589944 - | hypothetical protein YPTB0501 591728 - 593041 + | putative sugar binding protein, ABC transport system TERM 642 593282 - 593306 + G 73 -8.5 -3.95653 | CACGTTGTTATATGT CCTGGTCACCA TGG TGGTGGCCGCG TTTATCGCCTTCTTT YPTB0502 593049 - 593933 + | ABC type sugar transport system, permease protein YPTB0503 593952 - 594791 + | ABC type sugar transport system, permease protein TERM 643 595155 - 595167 + G 71 -9.1 -3.5393 | opp_overlap 595153 AGGTCGAATCAACCG CCGAG TTG CTCGG TTTACAAGCGCTGCT TERM 644 595758 - 595768 + G 71 -8.2 -3.77209 | overlap 595755 TCTTTTGCAGCACGG GCGG GGG CCGC TTTACCTCTGTATTT YPTB0504 594803 - 595897 + | putative sugar ABC transporter, ATP-binding protein TERM 645 596020 - 596034 + G 74 -9.2 -3.67597 | TTTTCACCTCTGCAA CCGGCG TTA CGTCGG TTATTAAGTGAAGCG YPTB0505 595912 - 597078 + | hypothetical protein YPTB0506 597207 - 597650 + | hypothetical protein YPTB0507 597802 - 598440 + | hypothetical protein phnP 599238 - 598486 - | carbon-phosphorus lyase complex accessory protein phnN 599810 - 599229 - | ribose 1,5-bisphosphokinase phnM 600946 - 599810 - | carbon-phosphorus lyase complex subunit phnL 601662 - 600943 - | putative ABC phosphonate transporter, ATP binding protein, also putative C-P lyase component TERM 646 601048 - 601059 + g 71 -7.2 -4.02051 | opp_overlap 601039 601048 601047 GAAAATCCCGACAAT CGCG GCAC CGCG TTGTTTAGCTTCATC TERM 647 601799 - 601774 - R 81 -11.9 -2.52543 | gap 1, opp_overlap 601774 601796 AGTGCCTGCAATCGA GCAGGA-GGGCA GGC CGCCCCTCCTGC ACCTGCGGCTTTGCT TERM 648 601827 - 601839 + r 71 -9.1 -3.30605 | opp_overlap 601825 GCTCAACATCCAATG CCCAC TAC GTGGG TTCCCTTCTTCATCT TERM 649 601872 - 601903 + r 100 -12.4 -3.5393 | TCGGCTTTACGGGCT GGCTTTAACCTACA TCCC TGTAGGTTGACGCC TTTCGCCGACGTCCT phnK 602842 - 602051 - | phosphonates transport ATP-binding protein phnJ 603723 - 602842 - | protein in phn operon phnI 604894 - 603716 - | putative carbon-phosphorous lyase subunit phnH 605520 - 604894 - | carbon-phosphorus lyase complex subunit phnG 605996 - 605520 - | putative carbon-phosphorous lyase subunit TERM 650 605839 - 605821 - G 85 -8 -4.79352 | overlap 605822 TCACCGAGAATAAAA CGGCGGCC GGT GGCCCCCA TCCGCGCCTGCAATT TERM 651 605838 - 605822 - G 71 -9.3 -3.46888 | overlap 605821 CACCGAGAATAAAAC GGCGGCC GGT GGCCCCC ATCCGCGCCTGCAAT phnF 606722 - 605997 - | putative transcriptional regulator nrdG 607484 - 607050 - | anaerobic ribonucleotide reductase-activating protein TERM 652 607579 - 607608 + r 74 -9.2 -3.33492 | GGTGACTCAGCCCAT CAGCAGGCCTCG CATTGA CGAGGCCTGAGG TTGTCGCCTACCTAC nrdD 609829 - 607691 - | anaerobic ribonucleoside triphosphate reductase TERM 653 608857 - 608867 + g 77 -6.8 -4.56597 | GTTTTGGGAATACCG CCGT TTT ACGG TTTTTACCCAAGCCC TERM 654 609898 - 609875 - R 78 -10.2 -3.24245 | overlap 609871 TTATCCACAAGGCAA CCCGCAGCAC ATCA GGGCTGCGAG GGGGATGTGGATGCT TERM 655 610058 - 610071 + r 75 -5.3 -4.82901 | TCCCTGTTCAGTACG TCACA GAAT TGTGA TTTTTATGGCGAGGG YPTB0520 610964 - 610263 - | ABC oligo-dipeptide/nickel transporter, ATP binding subunit YPTB0521 611844 - 610966 - | ABC oligo-dipeptide/nickel transporter, ATP binding subunit TERM 656 611419 - 611452 + g 82 -11.7 -3.28712 | opp_overlap 611421, overlap 611421 GGCCAGTGCATTTAA TACCCGTTCATGCGC ATCA GCGCTTGAAAGGGTG TTATGCAGCAACAGA TERM 657 611421 - 611450 + g 82 -12.1 -3.21276 | opp_overlap 611421, overlap 611419 CCAGTGCATTTAATA CCCGTTCATGCGC ATCA GCGCTTGAAAGGG TGTTATGCAGCAACA TERM 658 611450 - 611421 - G 81 -12.1 -3.09327 | opp_overlap 611421 611419 CCAGTGCATTTAATA CCCGTTCATGCGC ATCA GCGCTTGAAAGGG TGTTATGCAGCAACA YPTB0522 612673 - 611837 - | ABC oligo-dipeptide/nickel transporter, permease subunit YPTB0523 613741 - 612692 - | ABC oligo-dipeptide/nickel transporter, permease subunit TERM 659 613724 - 613693 - G 74 -4.3 -4.94243 | opp_overlap 613693 613695 613698, overlap 613695 613698 GTAAAAAAACCAAAA GATGACGCCGGGA GGGGGT TCCCGGCGTGGTA TTTAATGCTACAGAC TERM 660 613695 - 613722 + g 74 -9.8 -3.48024 | opp_overlap 613695 613693 613698, overlap 613693 613698 AAAAAAACCAAAAGA TGACGCCGGGAG GGGG TTCCCGGCGTGG TATTTAATGCTACAG TERM 661 613698 - 613719 + g 85 -13.7 -2.88215 | opp_overlap 613698 613695 613693, overlap 613695 613693 AAAACCAAAAGATGA CGCCGGGAG GGGG TTCCCGGCG TGGTATTTAATGCTA TERM 662 613719 - 613698 - G 83 -13 -3.01018 | opp_overlap 613695 613693 613698, overlap 613695 613693 AAAACCAAAAGATGA CGCCGGGA GGGGGT TCCCGGCG TGGTATTTAATGCTA YPTB0524 615417 - 613837 - | ABC transporter, periplasmic oligo-dipeptide/nickel binding protein TERM 663 615597 - 615581 - H 75 -5.2 -4.79352 | TTAGTGATAATAAAA TATTCC GTAAA GGAATA ATGATGAGGTTATTG TERM 664 615679 - 615705 + H 72 -10.1 -2.88849 | gap 1, opp_overlap 615668, overlap 615674 615680 ACATCCATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCTCTGCC TERM 665 615680 - 615706 + H 84 -10.1 -3.82218 | gap 1, opp_overlap 615668, overlap 615674 615679 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCTCTGCCT YPTB0525 616044 - 616502 + | hypothetical protein argI 617772 - 616765 - | ornithine carbamoyltransferase subunit I YPTB0527 617983 - 618414 + | hypothetical protein yjgM 619276 - 618773 - | putative acetyltransferase TERM 666 619392 - 619354 - R 100 -14.7 -4.66833 | overlap 619355 GTGCAATGGTAAAAA GCAGGGGCCATGATAGT GAATA ATTATCATGGCCCCTGG TGACGACTGACTGAT TERM 667 619391 - 619355 - R 100 -18.2 -3.39618 | overlap 619354 TGCAATGGTAAAAAG CAGGGGCCATGATAGT GAATA ATTATCATGGCCCCTG GTGACGACTGACTGA valS 622316 - 619419 - | valyl-tRNA synthetase TERM 668 620642 - 620656 + g 71 -7.1 -4.07687 | opp_overlap 620641 CATCACGGATCAGAC CGGTC ATGTA GACCG TTTTGAACGGCACCT holC 622778 - 622329 - | DNA polymerase III subunit chi TERM 669 622815 - 622798 - R 95 -11.3 -3.80625 | TCTCTACAACGTAAA GGGCACA AAAA TGTGCCC TCAGACTGCTAACAA pepA 624440 - 622929 - | leucyl aminopeptidase TERM 670 622974 - 623007 + g 76 -9.5 -3.67597 | opp_overlap 622980, overlap 622977 CAGTAGGAACTGAGA CAACAACGCGACTGG CCGG CCAGTCGCGCCCTTG TTCTTACCTGAACGC TERM 671 623001 - 622980 - G 100 -15.9 -3.90761 | opp_overlap 622977 622974 GAACTGAGACAACAA CGCGACTGG CCGG CCAGTCGCG CCCTTGTTCTTACCT yjgP 624720 - 625814 + | putative membrane protein, permease TERM 672 626432 - 626415 - g 75 -3.4 -5.0095 | gap 1, opp_overlap 626415 626429 AAAAAGACAATAAAA CCTGGCG GTTAT CGC-AGG TTGATGAATCTGATT yjgQ 625814 - 626890 + | putative membrane protein, permease TERM 673 627109 - 627094 - T 73 -9 -3.42663 | opp_overlap 627094, overlap 627092 ATTAGTATGTAAAGA GACCTC AACT GAGGTC TTTTTTTATGTCTAA TERM 674 627094 - 627109 + T 100 -9 -5.76633 | opp_overlap 627094 627092 ATTAGTATGTAAAGA GACCTC AACT GAGGTC TTTTTTTATGTCTAA TERM 675 628299 - 628320 + T 73 -8.7 -3.57128 | overlap 628294 AAGTTGAAGTCTGTG GCCACGGTT TCAG AACCATGGC TTGTAGTTCATTGAT TERM 676 628624 - 628603 - T 80 -10.1 -3.70149 | opp_overlap 628603 TTTATATCACTGAAA GCCTCTGTC AAAA GACAGGGGC TTTTGCGTTTTAATC TERM 677 628603 - 628624 + T 100 -12.3 -4.44277 | opp_overlap 628603 TTTATATCACTGAAA GCCTCTGTC AAAA GACAGGGGC TTTTGCGTTTTAATC TERM 678 628805 - 628770 - T 91 -8.4 -4.61482 | overlap 628772 CCTCTGAAAAAAGAA CACTCAGCATAAGT GTGGCAGG ACTTACGCTGAGGG AGGGACGTCCATCAC TERM 679 628803 - 628772 - T 83 -9.6 -3.91465 | overlap 628770 TCTGAAAAAAGAACA CTCAGCATAAGT GTGGCAGG ACTTACGCTGAG GGAGGGACGTCCATC YPTB0535 632042 - 628794 - | putative type I restriction enzyme, R subunit TERM 680 630606 - 630578 - G 85 -10.3 -4.24002 | opp_overlap 630580 GGTCAAAGCCCAAAA CATTGCCGTCG CGAATAC CGTCGGCAATG CTGTAGCGGTGTAGC TERM 681 630919 - 630931 + g 90 -7.7 -5.01811 | ACAATTAACGTATCG GCAGT TGC ACTGC TTTTTAATTTAGTAA TERM 682 632069 - 632086 + r 71 -8.5 -3.46873 | overlap 632068 ATATAAACATTTTTC TCAAGCA GGCC TGCTTGA TGTTGTTAAGTTTGG YPTB0536 633335 - 632052 - | putative type I restriction enzyme, S subunit YPTB0537 635928 - 633337 - | putative type I restriction-modification system, methyltransferase subunit (N-6 DNA methylase) TERM 683 634687 - 634710 + g 74 -3.8 -4.88407 | opp_overlap 634670 634686 634687 634689, overlap 634689 TTTGGAGGCATCAAC CACCAATACA TCGG TGTTTTGGCG TTTTTGCTTGAGTAC TERM 684 634985 - 634996 + g 72 -5.8 -4.42386 | opp_overlap 634984 634985 TCGCTGTCTTTAAAG CTGG GGTC CCAG TTTTGTGAGTAAGGC YPTB0538 637317 - 636271 - | M48 peptidase family protein YPTB0539 638560 - 637364 - | hypothetical protein TERM 685 638777 - 638797 + H 91 -8.5 -4.652 | opp_overlap 638776 638781, overlap 638781 TTTCATGGAATATAT TAAATTTAG CAC CTAAATTTA TTTTTAGGGTAATTT TERM 686 638781 - 638793 + H 74 -4.9 -4.87389 | opp_overlap 638776 638781, overlap 638777 ATGGAATATATTAAA TTTAG CAC CTAAA TTTATTTTTAGGGTA YPTB0540 639266 - 639802 + | hypothetical protein TERM 687 639851 - 639832 - g 84 -13.6 -2.55544 | opp_overlap 639830 639828, overlap 639828 TTATCAGTCAACTGA CGGCTCTG GTAT CAGAGCCG AATAGTATTCACCAT YPTB0541 639804 - 640679 + | putative transcriptional regulator frwD 641016 - 640672 - | putative fructose-like phosphotransferase EIIB subunit 3 frwB 641429 - 641109 - | putative fructose-like phosphotransferase EIIB subunit 2 frwC 642637 - 641552 - | putative fructose-like permease EIIC subunit 2 TERM 688 642830 - 642817 - H 78 -5.3 -4.91511 | ATGTCATCAGAAAAA TGAGA GCCA TCTCA ACTTCCCGGCGATTA TERM 689 644238 - 644252 + G 71 -7.1 -4.0274 | GCTTTCAATCAAGGT GCCGA ATCCA TCGGC TTGTTTCGTACTGAA TERM 690 645232 - 645246 + G 77 -4.2 -5.00884 | TGGCTGCGGATGTGT GGGC GCGAGAA GCCC TTTTTTCCACCGGAT pstA 642999 - 645539 + | PTS family enzyme I phosphohistidine subunit YPTB0546 646092 - 645601 - | hypothetical protein yneC 646705 - 646415 - | autoinducer-2 (AI-2) modifying protein LsrG yneB 647644 - 646769 - | aldolase TERM 691 647241 - 647221 - G 81 -12.5 -3.0094 | CCGTACCGATATACA CCTGTGCGG CGA CCGCGCAGG CATTGAGCCGTACAG TERM 692 647533 - 647518 - G 73 -5.4 -4.56597 | gap 1, opp_overlap 647518, overlap 647519 TTTTCGGGTTAAAAA TCCGCGC CAG GCG-GGA TTGCATTCCCCAATC YPTB0549 648719 - 647700 - | ABC transporter, perplasmic sugar binding protein ydeZ 649765 - 648764 - | ABC sugar transporter, permease subunit ydeY 650817 - 649762 - | ABC sugar transporter, permease subunit ego 652394 - 650811 - | sugar ABC transporter ATPase TERM 693 651374 - 651391 + g 80 -9.1 -4.26076 | opp_overlap 651369, overlap 651386 AATACACTAAGCCCG CCGCCAG GCGA TTGGCGG TTTTCATCGCCGTGA TERM 694 651928 - 651914 - G 78 -7.8 -4.36411 | opp_overlap 651914 CATCAAGGATCAAAA TGCGCG AGT CACGCA TCAGGCCGCGCATAA ydeW 652739 - 653752 + | putative transcriptional repressor ydeV 653923 - 655515 + | autoinducer-2 (AI-2) kinase TERM 695 655633 - 655599 - f 100 -10.7 -4.29928 | gap 1, opp_overlap 655616 AATTAATAGCGAAAA GCGGCCAGC-TTGCGC TTCG GGGCAATGCTCGCCGC CGTCACGTGCTGCGT TERM 696 656208 - 656172 - g 70 -8 -3.79747 | overlap 656194 GCATGCAGGATTAAA GGCGCAAATCAGTG GCGAAAAAG CACTGTTTAGCGCC CTAAAAAAACAACAT TERM 697 656207 - 656194 - g 71 -4.5 -4.58663 | overlap 656172 ATCAGTGGCGAAAAA GCACT GTTT AGCGC CCTAAAAAAACAACA TERM 698 656264 - 656276 + G 71 -6.9 -4.15044 | ATCAATGGCGGGCTG CGGCG TAT TGCCG TTTGTTAAAACCCAC YPTB0555 655984 - 657024 + | putative lipopolysaccharide core biosynthesis protein TERM 699 657174 - 657192 + G 71 -4.6 -4.59414 | CCAACGAATAATCAG CTAATGAG TGT TTCATTGG TTTTGATTATTATCA TERM 700 657905 - 657916 + G 75 -5.8 -4.5442 | TAATTCCTCCATGGG GCAG CGTT CTGC TTTTGTGGTTGAAGC YPTB0556 657072 - 658298 + | putative O-antigen biosynthesis protein TERM 701 658328 - 658345 + F 100 -9.1 -5.49569 | opp_overlap 658308 658328 ATCTCTATGATATAA CGGTACC ATTT GGTGCCG TTTTTTATATTCGTC TERM 702 658519 - 658532 + F 70 -2.5 -4.98436 | TAATTAACTTCTGAT TTAAA TTAA TTTAA TTTTTATAGTGTTGG TERM 703 659703 - 659726 + G 74 -9 -3.65201 | opp_overlap 659708, overlap 659708 TAGGTCAGGTACCAC TAAAAGCTGC TGTA GTAGCTTTTA TTATTAAAGATATTC TERM 704 659708 - 659721 + G 77 -4.5 -4.89477 | opp_overlap 659708, overlap 659703 CAGGTACCACTAAAA GCTGC TGTA GTAGC TTTTATTATTAAAGA YPTB0557 658664 - 659932 + | cysteine desulfurase TERM 705 659968 - 659953 - f 72 -6.2 -4.258 | TCATCGACGAATAAA TTACTG GTTA CAGTAA GAGGTATTATATGAA TERM 706 660504 - 660515 + G 70 -2.2 -4.86621 | CGTAGTGAAAGTAGT GATC TGCA GGTC TTTTTGGTTCAGCGT TERM 707 660917 - 660891 - g 78 -5.9 -4.67982 | gap 1, opp_overlap 660891 660896, overlap 660886 CGGCAGGCAAGAAAA GAGAGCGATCCC TACT GGGATC-CTATC TCTTCAGCGGCAAAG YPTB0558 659979 - 661157 + | acyl-CoA dehydrogenase YPTB0559 661159 - 661434 + | hypothetical protein YPTB0560 661436 - 662272 + | hypothetical protein TERM 708 662250 - 662265 + F 71 -3.2 -5.04222 | CTGATACTCTGGCTG CTGTCG TCGT CGAAAG TTTTTAATTTAATTA YPTB0561 662305 - 663531 + | putative protein involved in molybdopterin biosynthesis YPTB0562 663949 - 663710 - | hypothetical protein YPTB0563 664447 - 664644 + | hypothetical protein YPTB0564 664671 - 664904 + | hypothetical protein YPTB0565 664956 - 666038 + | lipoprotein heavy metal/multidrug efflux protein TERM 709 667535 - 667523 - g 78 -5.5 -4.93365 | TTCCAGAACCAAAAA CAGCC TGA AGCTG ATGCGGATAAGCCGG TERM 710 667848 - 667858 + G 76 -8.2 -3.9712 | CAACCATAGGTCAGG GCGC AAT GCGC TTTATGCTGACCTAC YPTB0566 666038 - 669124 + | heavy metal/multi-drug efflux protein TERM 711 669164 - 669187 + T 100 -11 -6.34424 | TAAAAGTAATTTCAG CAGCCCCG GTCAGTCA CGGGGCTG TTTTTTTTTTGACGA YPTB0567 669819 - 669487 - | hypothetical protein YPTB0568 670313 - 669966 - | hypothetical protein YPTB0569 670620 - 671705 + | pectinesterase A precursor (pectin methylesterase A) hmsT 673418 - 672246 - | diguanylate cyclase/phosphodiesterase TERM 712 673907 - 673921 + G 82 -5.6 -5.1356 | AGCATGTTGTACCAC GTGCGG TTG CGGCAC TTTTTGTTACTGCCA YPTB0571 673760 - 673999 + | hypothetical protein rsmC 675920 - 674877 - | 16S ribosomal RNA m2G1207 methyltransferase TERM 713 675001 - 674973 - G 76 -9.5 -3.72576 | TTCGTGGCTACCAAA TGCGGCATCCAGC AAG GCAGGATACGGCA GGAAGGAGTTCGCTA TERM 714 675814 - 675828 + g 70 -10 -3.24924 | opp_overlap 675814 675813, overlap 675812 CCGGCTGCATCAAAT TGCGCT GGC AGCGCA TCTTGTAAATCACCG TERM 715 676346 - 676363 + GH 75 -8.4 -3.87815 | opp_overlap 676339 676346 GTGCACAATTACATA GCCCAG AATTAG CTGGGC TTTATCAAGATGCGG holD 676033 - 676470 + | DNA polymerase III subunit psi TERM 716 676530 - 676506 - gf 78 -4.2 -5.09895 | CATGGACGGAAAAAA CGTTCGCC AGTAATCAG GGCGACCG GTACCTCAATTTTAA rimI 676415 - 676858 + | ribosomal-protein-alanine N-acetyltransferase TERM 717 676839 - 676863 + F 80 -3.6 -5.25154 | gap 2, opp_overlap 676828, overlap 676840 AAGATGCCATTATGA TGGCG-T-TGCC AAT GGCATAGCGCCG TTTTATTGTTTTTTT TERM 718 677254 - 677228 - g 80 -6.6 -4.81851 | opp_overlap 677239, overlap 677232 677233 ATGGAAATGGAAAAA CAACGCGGTA TCTCCAT TACCACGTCG GTAATGCAGTTTCCG TERM 719 677489 - 677465 - g 80 -9.3 -4.2461 | ACCTTTATGAACAAA TTGGACCGCGA AAT TCGTGATCCAA TGGAAGTTCTGGATG prfC 677036 - 678625 + | peptide chain release factor 3 osmY 678953 - 679567 + | periplasmic protein TERM 720 679685 - 679706 + F 72 -8 -3.82946 | opp_overlap 679685 679684 AGAGCCAAATGAAAG GGTGTCTG TTTAAT CAGGCACC TTATCTTTAAACTGG YPTB0577 679734 - 679895 + | hypothetical protein TERM 721 680352 - 680370 + G 78 -5.2 -4.85129 | opp_overlap 680353, overlap 680353 TCACGCTGAACAATA TTTGCGTC AGG GGCGCGAG TTTTTAATGTGTGCT yjjU 679969 - 681240 + | hypothetical protein yjjV 681277 - 682065 + | putative hydrolase TERM 722 682348 - 682322 - f 84 -10.1 -3.82218 | gap 1, opp_overlap 682331, overlap 682323 682338 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 723 682349 - 682323 - f 72 -10.1 -2.88849 | gap 1, opp_overlap 682331, overlap 682322 682338 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT TERM 724 682806 - 682818 + G 74 -4.1 -4.85782 | TATTGCTTATGGTAA TGAGG GGA TCTCA TTTATTTTTGGCGGA YPTB0580 682600 - 683871 + | putative Na+ dependent nucleoside transporter-family protein TERM 725 683880 - 683901 + F 77 -10.9 -2.81178 | opp_overlap 683880 683879, overlap 683879 ACTGTGATGTATAAG GTGCCGTTT TGTA GAACGGCAC GTTTCCCCTTCATTC TERM 726 683901 - 683880 - f 74 -10.2 -2.61383 | opp_overlap 683879 683880, overlap 683879 ACTGTGATGTATAAG GTGCCGTT TTGTAG AACGGCAC GTTTCCCCTTCATTC TERM 727 684011 - 683985 - f 79 -11 -3.15544 | opp_overlap 683970 683968, overlap 683970 GCGTATTCTCACCAA TACGCTATTCTT GAT ACGAATAGCGTA ATCGGGGCCAATAGA TERM 728 684124 - 684109 - f 76 -7.6 -4.08317 | TAATGTGAAACTAAA CACATC TCAT GATGTG CTAACGTGCTCAAAT deoC 684500 - 685297 + | deoxyribose-phosphate aldolase TERM 729 685324 - 685356 + F 71 -9.1 -3.34398 | opp_overlap 685322 685326, overlap 685322 685326 TCATTACACTGAATT GATGCACTGTAGGCT GAA GGCCTACAGTGTCGC TATTTCCGAAAGCGC TERM 730 685326 - 685355 + F 71 -10.1 -2.60496 | gap 1, opp_overlap 685322 685326, overlap 685324 685322 ATTACACTGAATTGA TG-CACTGTAGGCT GAA GGCCTACAGTGTCG CTATTTCCGAAAGCG deoA 685418 - 686740 + | thymidine phosphorylase deoB 686872 - 688095 + | phosphopentomutase deoD 688220 - 688939 + | purine nucleoside phosphorylase TERM 731 688977 - 689012 + T 79 -7.6 -4.31293 | overlap 688981 TCCAGCGGTTTTTTC TTTCTTCAGCGGTAGA GATT TCTGCCGCTGAATTGA TTTATTCCTCTCTGA TERM 732 688981 - 689008 + T 100 -15 -3.71527 | overlap 688977 GCGGTTTTTTCTTTC TTCAGCGGTAGA GATT TCTGCCGCTGAA TTGATTTATTCCTCT smp 689752 - 689051 - | hypothetical protein TERM 733 689792 - 689810 + H 73 -8.8 -3.51597 | overlap 689793 CCTGCATACTTGATG TTGCTGCG TGA CGCAGCGG TTCTGATTCACCCTT TERM 734 689793 - 689809 + H 71 -10.1 -2.70476 | overlap 689792 CTGCATACTTGATGT TGCTGCG TGA CGCAGCG GTTCTGATTCACCCT serB 689986 - 690966 + | phosphoserine phosphatase radA 691085 - 692467 + | DNA repair protein RadA TERM 735 692577 - 692590 + F 71 -4.5 -4.74052 | TAATAGTGCCAATCC CGCAG CATA CTGTG TTATTTTTGTTTAGT TERM 736 692684 - 692668 - g 71 -2.9 -4.93547 | overlap 692669 GCAATTAAGCAAAAA GGCTGCA CCT TACAGCA GGTGGCTGAGGCCAG nadR 692626 - 693897 + | nicotinamide-nucleotide adenylyltransferase TERM 737 693998 - 693970 - f 83 -11.9 -2.84634 | overlap 693973 693983 CTGGATATCATCACA TGAGCCGAATA TACTGGC TATTCGGCTCA CCAAATGAGCCGAAT TERM 738 694029 - 693973 - f 76 -10.9 -2.67992 | overlap 693970 693983 694004 GATATCATCACATGA GCCGAATATACTGGCTATTCGGCTCAC CAA ATGAGCCGAATAATGAGGCTAATCGGC TCACTCTCCGGTTGG TERM 739 694019 - 693983 - f 72 -9.5 -3.09289 | overlap 693970 693973 694004 CATGAGCCGAATATA CTGGCTATTCGGCTCAC CAA ATGAGCCGAATAATGAG GCTAATCGGCTCACT TERM 740 694032 - 694004 - f 73 -8.2 -3.72695 | overlap 693983 693973 ATTCGGCTCACCAAA TGAGCCGAATAA TGAGG CTAATCGGCTCA CTCTCCGGTTGGGAG YPTB0589 694054 - 695184 + | hypothetical protein TERM 741 695182 - 695211 + T 70 -9.3 -2.88861 | opp_overlap 695188, overlap 695187 695188 GTGAAATACCCTGAC TAAAAAGGCCTGC GATT GCAGGCCCTTCTA TCTGTCAGGCTACTA TERM 742 695187 - 695206 + T 78 -9.2 -3.64198 | opp_overlap 695188, overlap 695182 695188 ATACCCTGACTAAAA AGGCCTGC GATT GCAGGCCC TTCTATCTGTCAGGC TERM 743 695188 - 695205 + T 89 -12.7 -2.78197 | opp_overlap 695188, overlap 695187 695182 TACCCTGACTAAAAA GGCCTGC GATT GCAGGCC CTTCTATCTGTCAGG TERM 744 695205 - 695188 - T 100 -12.7 -4.72986 | opp_overlap 695188 695187 695182 TACCCTGACTAAAAA GGCCTGC GATT GCAGGCC CTTCTATCTGTCAGG yjjK 697012 - 695345 - | putative ABC transporter ATP-binding protein TERM 745 696243 - 696257 + g 88 -2.1 -5.7946 | gap 1 TCAGAAGAGGCTTCT TGCGCC AGAC GG-GCA TTTTTTTGTTCCAGC TERM 746 697181 - 697160 - R 90 -10.9 -4.05926 | GAATAAAGGCAGAAA CCGGTTTAC AGCC GCAAACCGG TAAATAAAGGACGTT YPTB0591 697701 - 697195 - | OmpA/OmpF family outer membrane porin YPTB0592 698984 - 697707 - | hypothetical protein TERM 747 698650 - 698682 + g 79 -10 -3.90766 | TGATGGATAGGCCCA TCGTCAGGTAGC GCCCAGTAA GCTATCTGACGA TTATGTTTATCAATG YPTB0593 699628 - 699005 - | hypothetical protein TERM 748 699745 - 699765 + r 72 -6.3 -4.34263 | overlap 699739 699743 699755 699757 ATATCATCGTAAATT TGAGATTTA TCT TAAATCTTA TTTATGTTATTGAAA TERM 749 699812 - 699796 - R 84 -2.9 -5.59879 | opp_overlap 699796 TAGAAATATAAAAAA CCCGA CTGTTTT CCGGG TTTTTGTCAGGTAGT TERM 750 699952 - 699982 + r 77 -3.8 -5.1523 | opp_overlap 699952 TTATTTACCTCAAAA GCCCCAGAGCTG GGCTGGA CTGATCCGGGGC TTTTTCTCTTCTGAC YPTB0594 702729 - 700003 - | putative Ca++ transporting P-type ATPase slt 703299 - 705218 + | lytic murein transglycosylase trpR 705489 - 705866 + | Trp operon repressor YPTB0597 706405 - 705863 - | NTPase gpmB 706515 - 707162 + | phosphoglycerate mutase rob 708025 - 707159 - | AraC/XylS family transcription factor creA 708251 - 708718 + | hypothetical protein TERM 751 708845 - 708868 + T 70 -7.4 -3.76607 | opp_overlap 708847, overlap 708847 GATATAAAAACAAAA AAGCCAGCAT CTGT GTGCTGGCTC TTTCCGTCTCTATTC TERM 752 708847 - 708866 + T 78 -10 -3.45632 | opp_overlap 708847, overlap 708845 TATAAAAACAAAAAA GCCAGCAT CTGT GTGCTGGC TCTTTCCGTCTCTAT TERM 753 708866 - 708847 - T 100 -9.3 -5.98675 | opp_overlap 708847 708845 TATAAAAACAAAAAA GCCAGCA TCTGTG TGCTGGC TCTTTCCGTCTCTAT arcA 709608 - 708892 - | two-component response regulator TERM 754 710619 - 710641 + H 100 -12 -6.11644 | opp_overlap 710619 AAACAACAGAAAAAA GCCCGCAC CTAGACA GTGCGGGC TTTTTTTTTCAATCA TERM 755 710641 - 710619 - H 100 -12.7 -5.57729 | opp_overlap 710619 AAACAACAGAAAAAA GCCCGCACC TAGAC AGTGCGGGC TTTTTTTTTCAATCA thrA 710712 - 713171 + | bifunctional aspartokinase I/homeserine dehydrogenase I TERM 756 713659 - 713673 + G 71 -6.4 -4.15508 | overlap 713660 GGAAGGTTATATCAG TCAGGA TGT TCCTGG TTTTAGCGATTGGTT thrB 713174 - 714103 + | homoserine kinase TERM 757 714273 - 714288 + G 75 -5.4 -4.73613 | gap 1 TTGTGACCCGTAGTA GCCG-CA TTC TGTCGGC TTTTATTGGTAGTGA TERM 758 715344 - 715372 + G 73 -4.6 -4.74801 | TGCTATCCCATGATT TGCCCGCA GACTTTGCACAAA TGCGGGCA TTTTTGATGGCATTG thrC 714107 - 715396 + | threonine synthase yaaA 716989 - 716213 - | hypothetical protein TERM 759 718166 - 718149 - g 91 -7 -5.32882 | CAGTACTACAAAAAA CACGGT TATAAG ACCGTG GTGATGGGTGCAAGC talB 717504 - 718457 + | transaldolase B TERM 760 718515 - 718500 - f 74 -10.4 -2.73364 | opp_overlap 718500 TCGGTATCTGAATGA GGTGGC GCAA GCCACC TTTTTTATTGCCGAT TERM 761 718500 - 718515 + F 100 -10.4 -5.45652 | opp_overlap 718500 TCGGTATCTGAATGA GGTGGC GCAA GCCACC TTTTTTATTGCCGAT mogA 718745 - 719332 + | molybdenum cofactor biosynthesis protein TERM 762 720655 - 720666 + G 81 -5.8 -4.84363 | opp_overlap 720654 CTTTCTCGTACAATG TGGC CTAT GCCA TTTTTGGTGGTTTAA YPTB0608 719460 - 720839 + | major facilitator superfamily proline/glycine/betaine permease TERM 763 720861 - 720903 + T 84 -5.3 -5.38951 | gap 2, opp_overlap 720867, overlap 720862 720867 TAAGTCAATTCACTT TA-AAAAGCCCATAA-TTATT ATC AATAAATTATGGGCTTTTATC TTTTTTCTATACCTT TERM 764 720862 - 720901 + T 100 -10.4 -4.31943 | gap 1, opp_overlap 720867, overlap 720861 720867 AAGTCAATTCACTTT AAAAAGCCCATAA-TTATT ATC AATAAATTATGGGCTTTTA TCTTTTTTCTATACC TERM 765 720896 - 720867 - T 100 -10.3 -4.63184 | gap 1, opp_overlap 720862 720861 720867 AATTCACTTTAAAAA GCCCATAA-TTATT ATC AATAAATTATGGGC TTTTATCTTTTTTCT TERM 766 720867 - 720896 + T 100 -10.3 -5.08086 | gap 1, opp_overlap 720867, overlap 720862 720861 AATTCACTTTAAAAA GCCCATAA-TTATT ATC AATAAATTATGGGC TTTTATCTTTTTTCT YPTB0609 723373 - 720917 - | hypothetical protein TERM 767 723631 - 723593 - R 84 -9.8 -3.85165 | opp_overlap 723593 723596, overlap 723594 723596 GAGTGGAAAGTGAAA TCACCTTGAATATTAATT TTT ACCTAATATTCAAGGTGC TGTGTAATATAAGCT TERM 768 723630 - 723594 - R 100 -13.3 -2.90617 | opp_overlap 723593 723596, overlap 723593 723596 AGTGGAAAGTGAAAT CACCTTGAATATTAATT TTT ACCTAATATTCAAGGTG CTGTGTAATATAAGC TERM 769 723628 - 723596 - R 73 -10.1 -3.00017 | opp_overlap 723596 723593, overlap 723594 723593 TGGAAAGTGAAATCA CCTTGAATATTAATT TTT ACCTAATATTCAAGG TGCTGTGTAATATAA yaaH 724275 - 723664 - | hypothetical protein TERM 770 724078 - 724095 + g 93 -7.7 -5.31275 | opp_overlap 724072 AGAGGTAAATGCGGT GGCAGCA AATG TGTTGCC TTTTTTATACTCCAA TERM 771 724201 - 724187 - G 73 -7.1 -4.16842 | CTCAGTGGGAAGAAA CCTGC GTTGT GCAGG TTGAGCAAGACGGTA TERM 772 724248 - 724236 - G 75 -10.5 -3.39668 | overlap 724228 TCCCAAAGCCCATAA GGCCC AAT GGGCC AGGATTCGCCAACTT TERM 773 724921 - 724892 - g 70 -7.9 -3.82084 | TTCCAAGACGAAGAA GCACAGCGTGATA AAGA TATCATGCCGTAC AAAATTATTGCTGCA TERM 774 724987 - 724977 - g 73 -2.4 -5.12707 | overlap 724968 724978 724979 TTAAAGGCCAAAAAA TGGC ACC GCCG CAGATCTCTGCTGAA dnaK 724649 - 726559 + | molecular chaperone DnaK TERM 775 726645 - 726608 - f 100 -15.5 -3.53224 | opp_overlap 726606, overlap 726611 TACTGTTGCTGGAAA CCAGCACGGGCGTCGAG GAAA CTCTACGCCCGTGCACG CATGTTAAGGGTAGG TERM 776 726642 - 726611 - f 100 -20.2 -2.90496 | opp_overlap 726606, overlap 726608 TGTTGCTGGAAACCA GCACGGGCGTCGAG GAAA CTCTACGCCCGTGC ACGCATGTTAAGGGT TERM 777 727760 - 727747 - g 80 -3.1 -5.40072 | TGCTGGTGAAAAAAA TAGCC CGCG AGCTA AAAGTTTCTTAGATG dnaJ 726671 - 727810 + | chaperone protein DnaJ TERM 778 727850 - 727891 + F 74 -9.7 -3.12803 | opp_overlap 727852 727861, overlap 727852 727861 727886 CAGCTAATAAAGTAA AATGAAAGAAATCCTCGGT TGAT ATCGAGGATTTTTTTTATC TGTTGAATATGGATA TERM 779 727852 - 727889 + F 93 -12.3 -3.12142 | opp_overlap 727852 727861, overlap 727850 727861 727886 GCTAATAAAGTAAAA TGAAAGAAATCCTCGGT TGAT ATCGAGGATTTTTTTTA TCTGTTGAATATGGA TERM 780 727889 - 727852 - f 75 -5.7 -4.67942 | opp_overlap 727852 727850 727861 727886, overlap 727861 GCTAATAAAGTAAAA TGAAAGAAATCCTCGGT TGAT ATCGAGGATTTTTTTTA TCTGTTGAATATGGA TERM 781 727861 - 727880 + F 100 -8.6 -6.08563 | opp_overlap 727852 727861, overlap 727852 727850 GTAAAATGAAAGAAA TCCTCGGT TGAT ATCGAGGA TTTTTTTTATCTGTT TERM 782 727880 - 727861 - f 77 -6.4 -4.67692 | opp_overlap 727861 727852 727850, overlap 727852 GTAAAATGAAAGAAA TCCTCGGT TGAT ATCGAGGA TTTTTTTTATCTGTT nhaA 728053 - 729237 + | NhaA family Na(+)/H(+) antiporter TERM 783 729261 - 729290 + F 100 -13.7 -3.2048 | CACGTTATTGATTCA GCATTGCTGCC CAAGCGCA GGCAGCAATGC TTGGTGGAATTTAAA nhaR 729367 - 730266 + | transcriptional activator NhaR TERM 784 730375 - 730346 - T 100 -14.5 -3.08344 | opp_overlap 730352 730354, overlap 730354 GCCAAACGATAGAGA TAAAAAAACCGGC CTAA GCCGGTCTTTTTA CAAGCACTCAATGTC TERM 785 730352 - 730369 + T 76 -6.9 -4.57073 | opp_overlap 730346 730354, overlap 730354 CGATAGAGATAAAAA AACCGGC CTAA GCCGGTC TTTTTACAAGCACTC TERM 786 730367 - 730354 - T 100 -9.5 -5.77988 | opp_overlap 730352 730354, overlap 730346 ATAGAGATAAAAAAA CCGGC CTAA GCCGG TCTTTTTACAAGCAC TERM 787 730354 - 730367 + T 81 -9.5 -3.90048 | opp_overlap 730354 730346, overlap 730352 ATAGAGATAAAAAAA CCGGC CTAA GCCGG TCTTTTTACAAGCAC rpsT 730660 - 730397 - | 30S ribosomal protein S20 TERM 788 730498 - 730513 + g 75 -6.2 -4.62783 | GATCCACGATTGGTT GCATTT CATT AAATGC TTTTTGCGCTGCGTC TERM 789 731451 - 731478 + G 85 -10.6 -4.15565 | gap 1 CGGTAGGTGATGACT TCCGCTTTGGCGC AGG GCGCCAGGG-GGA TTTTCAACTACTGCA ribF 731075 - 732013 + | bifunctional riboflavin kinase/FMN adenylyltransferase ileS 732045 - 734861 + | isoleucyl-tRNA synthetase TERM 790 734971 - 734991 + G 80 -4.7 -5.03314 | overlap 734972 CCACTTTGCTCTGTA TGAATCGGT GCC ACTGATTCC TTTTTTCAACCTAAC lspA 734861 - 735370 + | lipoprotein signal peptidase fkpB 735438 - 735896 + | FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) ispH 735877 - 736830 + | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase TERM 791 736907 - 736890 - f 75 -8.4 -3.767 | opp_overlap 736890 TATTTACTGACGAAA GCAGCC CTTTGC GGCTGC TTTTTTATTGTGCCC TERM 792 736890 - 736907 + F 100 -8.4 -5.55769 | opp_overlap 736890 TATTTACTGACGAAA GCAGCC CTTTGC GGCTGC TTTTTTATTGTGCCC TERM 793 736947 - 736929 - f 100 -16 -4.37092 | opp_overlap 736929 ATTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC TERM 794 736929 - 736947 + F 100 -16 -3.07307 | opp_overlap 736929 ATTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC tnp 737060 - 737518 + | transposase for the IS1541 insertion element TERM 795 737596 - 737620 + F 100 -9.9 -4.55295 | opp_overlap 737599, overlap 737598 737599 ATAGGCGCATATGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTTGTGCCCAG TERM 796 737598 - 737618 + F 100 -12.5 -3.88703 | opp_overlap 737599, overlap 737596 737599 AGGCGCATATGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTTGTGCCC TERM 797 737599 - 737617 + F 100 -16 -2.92499 | opp_overlap 737599, overlap 737598 737596 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTGTGCC TERM 798 737617 - 737599 - f 100 -16 -4.8048 | opp_overlap 737599 737598 737596 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTGTGCC TERM 799 737640 - 737658 + F 84 -11.7 -3.18274 | opp_overlap 737640 TTTGTGCCCAGAAAA CCCCCAG CTAGT CTGGGGG TTCAGTTGGAGTACG TERM 800 737658 - 737640 - f 100 -11.7 -4.36914 | opp_overlap 737640 TTTGTGCCCAGAAAA CCCCCAG CTAGT CTGGGGG TTCAGTTGGAGTACG dapB 738009 - 738830 + | dihydrodipicolinate reductase TERM 801 738843 - 738860 + F 82 -5.6 -4.93296 | opp_overlap 738843 TAATGCTTTAAATTA CAACCA GTGATG TGGTTG TTTTTATCATAATCA TERM 802 738886 - 738904 + F 100 -8.2 -5.80951 | opp_overlap 738886 738884 AATCATTTGATAATA GGGCAATA TTT TATTGTCC TTTTTTATTTTAAAT TERM 803 740043 - 740022 - g 74 -10.9 -3.05596 | CATCTTCTTATCCAA TGGTCCTGG GGAT CCAGAACCA TGCGATTACGCGATC carA 739303 - 740478 + | carbamoyl phosphate synthase small subunit TERM 804 740537 - 740519 - g 73 -2.2 -5.07275 | opp_overlap 740529 740531 740536, overlap 740523 GTACAGATATAAAAA GCATCCTG ATT CTGGGCGC AGGCCCGATTGTTAT TERM 805 741452 - 741433 - g 74 -10 -3.53444 | GCACTGGCCTCTAAA GCAACCGG TTTC CCGATTGC CAAGATTGCCGCCAA TERM 806 741461 - 741475 + G 75 -11.4 -2.52896 | CGATTGCCAAGATTG CCGCCA AAC TGGCGG TCGGTTACACACTGG carB 740494 - 743727 + | carbamoyl phosphate synthase large subunit TERM 807 743780 - 743753 - T 79 -8.4 -4.07885 | opp_overlap 743757, overlap 743757 CATCCGTGGCGAAAA TCAAGGGCGATG GCAA CATCGCCCTTTT TACGTTCGCAGCTTA TERM 808 743776 - 743757 - T 100 -13.6 -3.66908 | opp_overlap 743757, overlap 743753 CGTGGCGAAAATCAA GGGCGATG GCAA CATCGCCC TTTTTACGTTCGCAG TERM 809 743757 - 743776 + T 100 -13.6 -4.74103 | opp_overlap 743753 743757 CGTGGCGAAAATCAA GGGCGATG GCAA CATCGCCC TTTTTACGTTCGCAG YPTB0625 744567 - 743953 - | RhtB/LysE family threonine efflux pump yjjP 744882 - 745682 + | putative transmembrane protein YPTB0627 745679 - 746143 + | hypothetical protein TERM 810 746365 - 746416 + G 78 -11 -3.37796 | GCTATGCCATGGCAT TTACCGGCTGATTTAGCGTGGTTC AAAC GTAACACGTTAAATAAACCGGTAA TTATGGGTCGTAAGA folA 746293 - 746775 + | dihydrofolate reductase TERM 811 746836 - 746801 - f 74 -9.9 -3.13368 | gap 1, opp_overlap 746806, overlap 746799 746806 746808 ACATCAAAACAATTA GCATACAGGCCCATTA GGTAA TAATGGGCCTGTTT-C ATTTAGAAAAATAAA TERM 812 746832 - 746806 - f 100 -15.3 -2.91094 | opp_overlap 746806, overlap 746801 746799 746808 AAAACAATTAGCATA CAGGCCCATTA GGTAA TAATGGGCCTG TTTCATTTAGAAAAA TERM 813 746806 - 746832 + F 100 -15.3 -4.05788 | opp_overlap 746801 746799 746806 746808 AAAACAATTAGCATA CAGGCCCATTA GGTAA TAATGGGCCTG TTTCATTTAGAAAAA TERM 814 746830 - 746808 - f 86 -12.1 -2.9913 | opp_overlap 746806, overlap 746806 746801 746799 AACAATTAGCATACA GGCCCATTA GGTAA TAATGGGCC TGTTTCATTTAGAAA YPTB0629 747266 - 747541 + | hypothetical protein YPTB0630 747614 - 748078 + | hypothetical protein TERM 815 748130 - 748101 - T 77 -10.9 -2.78706 | opp_overlap 748106, overlap 748106 AATTATAGGTGAAAT CTAAAGACGCATA AGCT CATGCGTCTTTAA TTAGCGTCTTTACAA TERM 816 748106 - 748125 + T 74 -7.9 -3.93026 | opp_overlap 748101 748106 TAGGTGAAATCTAAA GACGCAT AAGCTC ATGCGTC TTTAATTAGCGTCTT TERM 817 748125 - 748106 - T 75 -8.6 -3.85165 | opp_overlap 748106, overlap 748101 TAGGTGAAATCTAAA GACGCATA AGCT CATGCGTC TTTAATTAGCGTCTT apaH 749037 - 748168 - | diadenosine tetraphosphatase apaG 749431 - 749054 - | ApaG ksgA 750263 - 749445 - | dimethyladenosine transferase pdxA 751251 - 750256 - | 4-hydroxythreonine-4-phosphate dehydrogenase TERM 818 751176 - 751146 - G 88 -14.1 -2.62396 | GATCCGCGCAGACTA CCAGCTCAACAGG CCAAT CCTGTTGAGCCAG AGCGATGGCTAAATC surA 752539 - 751235 - | peptidyl-prolyl cis-trans isomerase SurA imp 754949 - 752607 - | organic solvent tolerance protein djlA 755134 - 755967 + | DNA-J like membrane chaperone protein rluA 756904 - 756284 - | 23S rRNA pseudouridylate 746 synthase TERM 819 756370 - 756382 + g 70 -7.7 -3.81339 | overlap 756375 CATGTAGCTGCAGCC GCGAT GCC ATCGC TTTGGCTTCTGGATG TERM 820 757971 - 757997 + r 100 -15.4 -3.16881 | opp_overlap 757973 ATATATTTGGGGTAA TAGTGTCCATTA AGA TAATGGACACTA TTCGTCAGATACGTG TERM 821 757995 - 757973 - R 100 -13.6 -3.02263 | opp_overlap 757971 ATATTTGGGGTAATA GTGTCCATTA AGA TAATGGACAC TATTCGTCAGATACG YPTB0639 758870 - 758127 - | hypothetical protein YPTB0640 759200 - 760213 + | hypothetical protein YPTB0641 760224 - 760784 + | hypothetical protein TERM 822 760916 - 760930 + G 75 -11.4 -2.52015 | overlap 760915 TCCGCCACAGTGCGC CGTGCC ATA GGCACG CTTGCTGCGTATGCC TERM 823 761560 - 761574 + G 71 -4.3 -4.67038 | opp_overlap 761560, overlap 761555 GTATGGTGCCAAAAA TCATC CTATT GATGA TTTTGCTTTTGAAGA YPTB0642 760784 - 762295 + | hypothetical protein TERM 824 762318 - 762293 - f 73 -5.5 -4.74598 | gap 1, opp_overlap 762296 762301 GAAAGCGAAAAGAAA TAAGCGCTGTGA ATA TCACT-CGCTTA TTAGAGGGGGAATAT TERM 825 762408 - 762392 - f 76 -10.9 -2.72991 | GTACATTTTTAATGA GGCAACT TTG AGTTGCC GAATACTGATTTAAC YPTB0643 762458 - 762976 + | hypothetical protein TERM 826 763021 - 762993 - f 78 -10.4 -3.26546 | opp_overlap 762995 TCAGAAATGCATTAA GACTGCTCTC GCGAGTTAG GAGAGCAGTC TTCCAAACTGGATTG YPTB0644 763050 - 763493 + | hypothetical protein YPTB0645 763526 - 765370 + | hypothetical protein YPTB0646 765363 - 766346 + | hypothetical protein clpB 766349 - 768952 + | putative ATP-dependent protease, Hsp 100, part of novel multi-chaperone system with DnaK, DnaJ, and GrpE YPTB0648 769056 - 771404 + | hypothetical protein YPTB0649 771417 - 773636 + | hypothetical protein TERM 827 773724 - 773764 + G 83 -6.9 -4.88795 | opp_overlap 773733 GATTATTGGCAGGCA CTTTACACAGCGTCAGTTG CAG CAGTTAACGCTGTCTGAGG TTTATTTTATTCAAT YPTB0650 773662 - 774765 + | hypothetical protein YPTB0651 774758 - 775375 + | hypothetical protein YPTB0652 775381 - 775746 + | hypothetical protein TERM 828 775960 - 775943 - g 80 -9.1 -4.18488 | opp_overlap 775945 ATTGAGCTGAATAAA GAGGGGT GGTC ACCCCCC GGTTTGTATCAGGGG YPTB0653 775739 - 776230 + | putative lipoprotein TERM 829 777139 - 777127 - g 71 -4.8 -4.65895 | opp_overlap 777136 GTGTTGATGCAAAAA CAGG TACAC CCTG AGCAGTTGTTCCAAT YPTB0654 776350 - 777705 + | hypothetical protein YPTB0655 777702 - 779312 + | hypothetical protein YPTB0656 779321 - 782815 + | hypothetical protein YPTB0657 782837 - 783190 + | hypothetical protein TERM 830 783236 - 783214 - T 100 -13.5 -5.71712 | CGTCAGACAAAAAAA TATCCGGGG GAATG CCCCGGATA TCAGACTGCTGACAA TERM 831 783325 - 783299 - T 70 -7.2 -3.82218 | gap 1, opp_overlap 783308, overlap 783300 AGGCAGAGGAGTAAA GCGTCCGCGCC AGGGAG GGCGCGG-CTC GAGCCTACATGGATG rapA 786352 - 783446 - | ATP-dependent helicase HepA TERM 832 783970 - 783948 - G 71 -6.3 -4.16016 | gap 1 TTATTTTTCAATAAA GACACCGCGC AACT GC-CGGTATC GCCAGACAGGATCAA TERM 833 786005 - 785967 - G 91 -11.7 -4.08216 | opp_overlap 785978 785979 TTACGGGCGCGAAAA CGCAGGGCAAAGCGATC CATGC GATCGATTTGACCGGCG AATAAGCGATCCTGT polB 789182 - 786813 - | DNA polymerase II TERM 834 787668 - 787642 - G 75 -3.7 -5.1101 | gap 2, overlap 787643 CGAGGATCGAAAAAA CGGCAGCCGCTGG AAC CCAGC-AC-GCCA TAAAAGGCATTCATA TERM 835 788364 - 788353 - G 71 -7.2 -4.09805 | CCATCAATAATTAAA CGCC CGGC GGCG GAAGCAAAGAAATGC TERM 836 789814 - 789837 + G 75 -8.1 -4.2074 | CCTTACCCAGTGTGA TTGGTGGCC TGACAT GGCCGCCGA TTTATCTCTTCCCCG YPTB0660 789378 - 790145 + | DedA family membrane protein thiQ 790897 - 790214 - | thiamine transporter ATP-binding subunit thiP 792518 - 790911 - | thiamine transporter membrane protein TERM 837 791139 - 791106 - G 79 -10.9 -3.58905 | opp_overlap 791105 791104, overlap 791108 791118 ATCGCCGATAGATAA CACACTGGCAAAGGC CAGC GCCTGAGCCAGTGGG CGTTTCAGGGCGCGT TERM 838 791137 - 791108 - G 85 -12.1 -3.37198 | opp_overlap 791105 791104, overlap 791106 791118 CGCCGATAGATAACA CACTGGCAAAGGC CAGC GCCTGAGCCAGTG GGCGTTTCAGGGCGC TERM 839 792488 - 792471 - G 73 -10.5 -3.14931 | CCCAGCGGCCAGCAA CCCCGGC CATA GCCAGGG CGCGATTAACGGCTG tbpA 793486 - 792494 - | thiamine transporter substrate binding subunit TERM 840 793178 - 793200 + g 73 -7 -4.30987 | opp_overlap 793177, overlap 793174 GTTACGGGTATCAAC CTGGCTTG GGGTAAA CAAGCCGG TTTGTTCTGCCGCCT TERM 841 793249 - 793259 + g 73 -4.6 -4.75174 | ACCCTAAAATCACAT CGGC CTG GCTG TTTTTACCTTCCATC YPTB0664 794132 - 795634 + | hypothetical protein TERM 842 795773 - 795754 - T 100 -12.2 -3.89695 | opp_overlap 795756 CGTGTATAAAGAGAA CAGCTAGC GAGC GCTAGCTG TTAAAATACTTAATG YPTB0666 796414 - 796037 - | IS1400 transposase protein B TERM 843 796451 - 796439 - R 80 -3.5 -5.37043 | ATCGCATATAAAAAA TTTTA CAA TAAAA AATGAGAGTATTTAA yabN 798218 - 796557 - | transcriptional regulator SgrR TERM 844 798397 - 798418 + H 100 -8.7 -5.93252 | TGGTGTTTTTCACCA GCCAGTAGG TTTT TCTGCTGGC TTTTTTCTTTTTCCC TERM 845 798829 - 798840 + H 71 -4.4 -4.84359 | CACCATTATGATTAT GCTA ATAA TAGC TTTTTCTGGCGCTGG TERM 846 799391 - 799401 + G 79 -3.2 -5.31855 | GCTGATGTTTAGCAT TGCC GCC GGTA TTTTTGTTATTAGTG setA 798864 - 800045 + | major facilitator superfamily transporter sugar efflux pump TERM 847 800145 - 800175 + T 86 -12 -3.20896 | gap 1, overlap 800143 800142 AGTTAAACGTGTTAC TTGTTGG-GCCGG TACGAC CCGGCACCAACAA TCTATTAGTTACTTA leuD 800925 - 800323 - | isopropylmalate isomerase small subunit leuC 802370 - 800940 - | isopropylmalate isomerase large subunit TERM 848 801871 - 801883 + g 74 -9.1 -3.64703 | ATGGTTTTGGCTCGT CCCTG CTT CAGGG TTTGGGTCGCCAACA leuB 803463 - 802372 - | 3-isopropylmalate dehydrogenase leuA 805028 - 803466 - | 2-isopropylmalate synthase TERM 849 805073 - 805092 + H 86 -10.6 -3.83155 | opp_overlap 805074, overlap 805074 AGCGGATAAAAAAAA ACCCGCGC ATTT GCGCGGGC TTGTTAATCTTGATG TERM 850 805091 - 805074 - H 100 -14.1 -6.22802 | opp_overlap 805074 805073 GCGGATAAAAAAAAA CCCGCGC ATTT GCGCGGG CTTGTTAATCTTGAT TERM 851 805074 - 805091 + H 95 -14.1 -2.8917 | opp_overlap 805074, overlap 805073 GCGGATAAAAAAAAA CCCGCGC ATTT GCGCGGG CTTGTTAATCTTGAT TERM 852 805364 - 805384 + H 81 -4 -5.4148 | overlap 805367 TTTTACAGAGTATTA TCCTGAGT AAGTC ACTCATGA TTTTTTAATTGTTTG TERM 853 805856 - 805874 + H 72 -6.2 -4.35885 | opp_overlap 805849 805856 805855, overlap 805849 ATTATAATTAAAATT TTTATATT ACT AATATAAA TTTGTTGTGGTGGCT TERM 854 806926 - 806910 - g 79 -2.2 -5.39721 | opp_overlap 806910 TCATTAGATAAAAAA GGGTCA TTCAG TGAGCC TTATTACGACTCAAC leuO 806244 - 807200 + | leucine transcriptional activator YPTB0674 807753 - 809558 + | putative AMP-binding enzyme-family protein TERM 855 809577 - 809616 + F 100 -13.6 -3.5362 | overlap 809575 809579 GTTCACCATTCCTCC CCGCAGTGACCGGTGTTA AGTC TCACACTGGTCGCTGCTG TCTTTCTGACCGTTC TERM 856 809579 - 809614 + F 100 -14.8 -3.33798 | overlap 809577 809575 TCACCATTCCTCCCC GCAGTGACCGGTGTTA AGTC TCACACTGGTCGCTGC TGTCTTTCTGACCGT TERM 857 809949 - 809935 - f 75 -5.6 -4.64159 | opp_overlap 809937, overlap 809937 ACAAATAAGAATAAA GAGGCG TTG CGCCTT TCCTACAGAATATCG TERM 858 809947 - 809937 - f 75 -8.2 -3.90009 | opp_overlap 809937, overlap 809935 AAATAAGAATAAAGA GGCG TTG CGCC TTTCCTACAGAATAT TERM 859 809937 - 809947 + F 73 -8.2 -3.73402 | opp_overlap 809935 809937 AAATAAGAATAAAGA GGCG TTG CGCC TTTCCTACAGAATAT TERM 860 810466 - 810489 + G 78 -11 -3.36492 | gap 1 CCTTTTATCTGGCAT CCACTGG-CCG TCC CGGTCCGGTGG TTATCGACTTGCCAA ilvI 810018 - 811745 + | acetolactate synthase 3 catalytic subunit ilvH 811748 - 812242 + | acetolactate synthase 3 regulatory subunit TERM 861 812271 - 812291 + F 100 -13.3 -6.25741 | CGCTCTAATGATCGG GCTCAGCGC ATA GCGTTGAGC TTTTTTTTCTTATTT TERM 862 812661 - 812674 + F 74 -6.7 -4.33165 | overlap 812654 GGATGCTGGCTCTCG GCAGA GCGC TCTGC TTTTCATCACTTTAC TERM 863 812727 - 812743 + G 71 -9.3 -3.53012 | opp_overlap 812726 GAAACTGGATGAGAT CGCGCGC CTT GCGGGCG TTTCGCGCACAACGG fruR 812710 - 813720 + | DNA-binding transcriptional regulator FruR TERM 864 813735 - 813752 + T 100 -11.3 -4.45544 | opp_overlap 813735 GTTCACTATAACGAA TCAGGGC ACCC GCCCTGA TTTTGATTGCTGACA TERM 865 813752 - 813735 - T 89 -11.3 -3.47322 | opp_overlap 813735 GTTCACTATAACGAA TCAGGGC ACCC GCCCTGA TTTTGATTGCTGACA ygaW 814291 - 813851 - | hypothetical protein TERM 866 813912 - 813900 - G 82 -5.5 -5.09173 | CAATATTCCAAAAAA TAGCC GTA GGCCA CCCCCATAACCATTG TERM 867 814740 - 814714 - H 84 -10.1 -3.82218 | gap 1, opp_overlap 814723, overlap 814715 814730 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 868 814741 - 814715 - H 72 -10.1 -2.88849 | gap 1, opp_overlap 814723, overlap 814714 814730 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT TERM 869 815596 - 815616 + G 70 -7.6 -3.92324 | overlap 815597 GTCGAGCATGAACCC TGCTGAAC GTCGA GTTCAGCG TTTGCTGTTAGGGCA mraZ 815393 - 815851 + | cell division protein MraZ mraW 815854 - 816816 + | S-adenosyl-methyltransferase MraW ftsL 816813 - 817130 + | cell division protein FtsL TERM 870 817240 - 817260 + G 71 -6.8 -4.31085 | opp_overlap 817241, overlap 817241 GCGTCAGGAAGAACA AGCCAGCT TTATT AGCTGGCG TTTTGCGTTGCTGTG TERM 871 817241 - 817259 + G 73 -10.3 -3.17928 | opp_overlap 817241, overlap 817240 CGTCAGGAAGAACAA GCCAGCT TTATT AGCTGGC GTTTTGCGTTGCTGT TERM 872 817259 - 817241 - g 85 -10.3 -3.99374 | opp_overlap 817240 817241 CGTCAGGAAGAACAA GCCAGCT TTATT AGCTGGC GTTTTGCGTTGCTGT ftsI 817196 - 818959 + | division specific transpeptidase, penicillin-binding protein 3 murE 818961 - 820433 + | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase murF 820430 - 821806 + | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase mraY 821800 - 822882 + | phospho-N-acetylmuramoyl-pentapeptide-transferase TERM 873 823723 - 823753 + G 79 -11.3 -3.55622 | gap 2 CCGCCCTGGCATTAG CT-GATG-CCGTGGG TAT CCCACGGGCATCCAG TTTGAAAGCCTTGAC TERM 874 823993 - 824012 + G 70 -10 -3.09933 | TCAAGGTCTACTGTT TTGGCCGC GATG GCGGTCAA TTGGCTGCGTTGCGC murD 822885 - 824201 + | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase ftsW 824201 - 825403 + | cell division protein FtsW TERM 875 826211 - 826228 + G 70 -2.5 -4.87786 | overlap 826212 826213 TCAGTGAAGTGGCGG CGGCGGG GCTA CCCGCGA TTTTTGTGCCATTCC murG 825400 - 826470 + | N-acetylglucosaminyl transferase murC 826608 - 828083 + | UDP-N-acetylmuramate--L-alanine ligase ddl 828076 - 828996 + | D-alanine--D-alanine ligase TERM 876 829371 - 829359 - g 75 -7.7 -4.30014 | CGGATGAACTTAAAA TCCAC CTG GTGGA GTACGTGCCCTTCGC ftsQ 828998 - 829825 + | cell division protein FtsQ ftsA 829852 - 831108 + | cell division protein FtsA TERM 877 831463 - 831430 - g 70 -8.1 -3.85522 | overlap 831432 AATTCAGCAGAAGAA GACCGTGAAGCTCTG CGTG CAGCGCTTGACGGTG CGGATATGGTCTTTA TERM 878 831461 - 831432 - g 79 -10.7 -3.50808 | overlap 831430 TTCAGCAGAAGAAGA CCGTGAAGCTCTG CGTG CAGCGCTTGACGG TGCGGATATGGTCTT ftsZ 831181 - 832332 + | cell division protein FtsZ TERM 879 832511 - 832501 - g 82 -5.4 -5.04385 | CACACCGGTAAAAAA GTCA CGC TGAC AATGCGACCCGCGCC lpxC 832429 - 833352 + | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase TERM 880 833532 - 833569 + T 80 -11.4 -2.71731 | opp_overlap 833522 AGCTACTTATCACGC TTGGTTGCGTTGGC ACCCTCTCCG GCCAACGCAGCCAG TCGTTCCAAGATCAC YPTB0695 834049 - 833519 - | hypothetical protein secM 834072 - 834605 + | SecA regulator SecM TERM 881 834772 - 834752 - g 71 -4.7 -4.65895 | overlap 834755 CGCCGCATGCAAAAA GTAGTTGAT GTC ATCAACCGC ATGGAACCTGATATT TERM 882 835799 - 835789 - g 77 -6.8 -4.50661 | opp_overlap 835788 835789 AATCCAGAATGAAAA CCAG ACA CTGG CTTCTATCACTTTCC secA 834683 - 837397 + | preprotein translocase subunit SecA TERM 883 837444 - 837427 - f 100 -12.7 -4.21343 | opp_overlap 837423 837439, overlap 837439 TGTAATATAGATAAA GGGCGGT TAAT ACCGCCC TGAGGTTATTGACAA TERM 884 837522 - 837548 + F 72 -10.1 -2.88849 | gap 1, opp_overlap 837511, overlap 837517 837523 ACATCCATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCTCTGCC TERM 885 837523 - 837549 + F 84 -10.1 -3.82218 | gap 1, opp_overlap 837511, overlap 837517 837522 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCTCTGCCT TERM 886 837609 - 837633 + F 89 -7.2 -4.97888 | gap 1, overlap 837612 GGTTTGTCAGTAGTC TGA-GGGCGGT TAAT ACCGCCCTTTA TTTTTAAGTTTTTTT TERM 887 837612 - 837629 + F 100 -12.7 -4.92828 | overlap 837609 TTGTCAGTAGTCTGA GGGCGGT TAAT ACCGCCC TTTATTTTTAAGTTT mutT 837692 - 838078 + | nucleoside triphosphate pyrophosphohydrolase TERM 888 838116 - 838143 + F 100 -9.3 -5.24129 | gap 1, opp_overlap 838120 CCTACTTTATTTTAA TGGAGCAAGACG TCCGT CGT-TTGCTCCA TTTTTTGTGCCCAGA TERM 889 838162 - 838180 + F 100 -16 -3.07307 | opp_overlap 838162 TTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC TERM 890 838180 - 838162 - f 100 -16 -4.36914 | opp_overlap 838162 TTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC tnpA 838293 - 838751 + | putative transposase TERM 891 838829 - 838853 + T 88 -9.9 -4.15222 | opp_overlap 838832, overlap 838831 838832 ATAGGCGCATATGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTAAAACACAT TERM 892 838831 - 838851 + T 100 -12.5 -3.6761 | opp_overlap 838832, overlap 838829 838832 AGGCGCATATGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTAAAACAC TERM 893 838832 - 838850 + T 100 -16 -2.80244 | opp_overlap 838832, overlap 838831 838829 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTAAAACA TERM 894 838850 - 838832 - T 100 -16 -4.8048 | opp_overlap 838832 838831 838829 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTAAAACA yacG 839147 - 838941 - | zinc-binding protein TERM 895 839091 - 839068 - G 74 -3.1 -5.06414 | CGCTTGCAACAAAAA GGGCGAAAA GGGCTT TGTTCACCC CAGATAACGACTTTT yacF 840107 - 839355 - | hypothetical protein coaE 840724 - 840104 - | dephospho-CoA kinase guaC 841020 - 842063 + | guanosine 5'-monophosphate oxidoreductase TERM 896 843439 - 843460 + G 79 -10.1 -3.74693 | TTTATTATCGAGTTC GGTGACCGC CTGA GCGATCACC TTTAATACGGTGGCA YPTB0704 842257 - 843465 + | putative transposase hofC 845085 - 843886 - | type IV pilin biogenesis protein hofB 846620 - 845082 - | hypothetical protein ppdD 847077 - 846613 - | putative major pilin subunit TERM 897 847107 - 847119 + r 79 -3.3 -5.30155 | overlap 847108 TGTTTAAGAAACTGG AGGCA GGG TGCCG TTTTTTAATTCATAC nadC 848188 - 847280 - | quinolinate phosphoribosyltransferase ampD 848301 - 848852 + | N-acetyl-anhydromuranmyl-L-alanine amidase TERM 898 849292 - 849314 + G 73 -3.5 -4.94058 | overlap 849294 849308 GGTGCTGGTTTGGGG GATTTTGCA ATTAG TGCAAAATA TTTTGTTTGGCTTCC ampE 849125 - 849979 + | regulatory protein AmpE TERM 899 850341 - 850311 - T 100 -16.2 -3.02511 | opp_overlap 850306 GGTACTTTGTCAATA GCCTAGGCCAGCAC TAA GTGCTGGCCTAGAT AGGGTTAACTAGCTG aroP 851778 - 850381 - | amino acid APC transporter TERM 900 851300 - 851280 - G 77 -4.7 -4.88405 | opp_overlap 851280 851283, overlap 851275 851292 AACCGCCAAATAAAA TCATCGCAA TAA TCGCGATCA CTTTAATGATGGCAA TERM 901 851574 - 851539 - G 71 -8.4 -3.72141 | gap 1, opp_overlap 851552 ATATTTATACGCAAA GTGGCTAAAGGAACCGG CTA CAGGTTC-TTCAACCAC CATTTCGCCTAGCTG TERM 902 852327 - 852353 + H 71 -6.8 -4.08689 | overlap 852323 TTAGTTAAGTGTGAA TTTAAATTCAAA AAA TATGAATTTAAA TTTAATTATTAAATG TERM 903 852680 - 852703 + G 73 -9.6 -3.36273 | opp_overlap 852684 CCCAAACTATCAGAT GTAATCGAGC AGCA GCTCGAATAC TTGATCTTGGAAGGG pdhR 852641 - 853405 + | transcriptional regulator PdhR aceE 853601 - 856264 + | pyruvate dehydrogenase subunit E1 TERM 904 856575 - 856545 - g 100 -8.9 -5.25772 | gap 1, overlap 856547 AAAGCAGAAGAAAAA CCGGCGGCGCCTGC TCAG GCAG-CGGCTCCGG CAGCCTCTGCGGCGA TERM 905 856879 - 856836 - g 75 -10.2 -3.44051 | gap 1, overlap 856837 856854 GCGCCAGCAGCAGAA GC-GGCTCCGGCTCAACAAGC CGC ACCTGTCGCGCCAGCGCCAGC CGCCGCACCTGCCGC aceF 856278 - 857852 + | dihydrolipoamide acetyltransferase TERM 906 857857 - 857881 + F 100 -17.2 -3.54743 | opp_overlap 857853, overlap 857836 857844 857860 TGGTGATGTAATCGC CAAGGCCGGC TTCGT GCCGGCCTTG TTGTGGTTACTGCTC TERM 907 857860 - 857878 + F 100 -13.1 -3.90241 | opp_overlap 857853, overlap 857836 857857 857844 TGATGTAATCGCCAA GGCCGGC TTCGT GCCGGCC TTGTTGTGGTTACTG TERM 908 859069 - 859079 + G 75 -5.4 -4.81551 | opp_overlap 859059 859069 GCAACTGCGCACCAA TGTG CCA CACA TTTTTGCTATCGGTG lpdA 858155 - 859582 + | dihydrolipoamide dehydrogenase TERM 909 859654 - 859673 + F 100 -11.4 -6.09133 | opp_overlap 859643 859654 TAAATAAAAGTGAAA CGGTCCCT ACAT AGGGGCCG TTTTTTTTTAGCCTA TERM 910 859673 - 859654 - f 83 -9.2 -4.02396 | opp_overlap 859654, overlap 859643 TAAATAAAAGTGAAA CGGTCCCT ACAT AGGGGCCG TTTTTTTTTAGCCTA TERM 911 860264 - 860249 - g 91 -6.8 -5.2189 | overlap 860251 TGAATCATTAAAAAA TCCGCC TGCG GGCGAA GAAGAATTCCTATTA TERM 912 860541 - 860525 - g 73 -9.5 -3.30124 | GCTGATGTTCGATAA CTTCTAC GAC GTAGAAG ATAAAGCCAAAGCTG acnB 860142 - 862739 + | bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase TERM 913 862792 - 862812 + F 100 -16.1 -4.45168 | opp_overlap 862792, overlap 862810 TCGCATCAGCTAAAA CGGGGGGCC ATT GGCCTCCCG TTTCTATTTTAAAAA TERM 914 862812 - 862792 - f 100 -13.9 -4.21194 | opp_overlap 862792 862810 TCGCATCAGCTAAAA CGGGGGGCC ATT GGCCTCCCG TTTCTATTTTAAAAA YPTB0717 863038 - 863397 + | hypothetical protein yddG 864409 - 863522 - | hypothetical protein TERM 915 863672 - 863695 + g 85 -5.2 -5.27477 | gap 1, opp_overlap 863671 CGTGAAATAGGATAG GGCCGCGACCA GTG TGG-CGTTGCC TTTTTTCATTGCGCT TERM 916 863865 - 863849 - G 85 -7.9 -4.7373 | opp_overlap 863857 GCAGGCGATTAAAAA CAGTGGC AGC GCCCCTG GCCCTTGGCTATATA TERM 917 864773 - 864794 + r 89 -10.2 -3.94746 | GACGAGCCGTTTTTA GGTGATCG CCTGAA CGATCACC TTTAATTCCGTATCA speD 865641 - 864847 - | S-adenosylmethionine decarboxylase speE 866609 - 865719 - | spermidine synthase TERM 918 866511 - 866521 + g 75 -3.2 -5.03314 | opp_overlap 866502 866501 AAAAATCACCAGGTC CTGA TGC TCGG TTTTTTCGCGGTACA yacC 867073 - 866726 - | hypothetical protein yacK 867390 - 868991 + | multicopper oxidase TERM 919 868996 - 869019 + F 100 -13.8 -5.24129 | overlap 868998 TCAGCGCCTGAGCCA CTCCCCGGTC GGTT GACCGGGGTG TTTTTTATAAAACCG TERM 920 868998 - 869017 + F 100 -15 -4.25873 | overlap 868996 AGCGCCTGAGCCACT CCCCGGTC GGTT GACCGGGG TGTTTTTTATAAAAC hpt 869211 - 869747 + | hypoxanthine-guanine phosphoribosyltransferase yadF 870717 - 870055 - | putative carbonic anhydrase TERM 921 870184 - 870198 + g 81 -7.8 -4.57341 | opp_overlap 870173 AATACCATATACCCA GCCGTG GAT CATGGC TTTTTGCCCGCGCTT TERM 922 870791 - 870772 - H 70 -9.4 -2.75307 | opp_overlap 870763, overlap 870763 870787 AATATACGGCAAGGA TTCCGATT TTGA AATCGGAA CAGTAGTTTCGGTAA yadG 870953 - 871879 + | putative ABC type drug efflux protein, ATP binding yadH 871876 - 872646 + | putative ABC type drug efflux permease protein TERM 923 873171 - 873159 - g 91 -3.4 -5.75599 | TAAAGCACAAAAAAA CAAC GACAT GTTG GGCGATTTAAATAAG yadE 872968 - 874161 + | hypothetical protein panD 874705 - 874325 - | aspartate alpha-decarboxylase TERM 924 874991 - 875009 + r 78 -10.3 -3.29511 | GCTCATCGGCGGTCA CGGGTTC CGAGC GAACCCG TTATGGGGGAATGCC panC 875970 - 875116 - | pantoate--beta-alanine ligase TERM 925 875822 - 875808 - G 74 -2.8 -5.1356 | opp_overlap 875820, overlap 875810 GCGGATTAACAAAAA TAGTCA CCA CGACCA CGTCAGCGCGGGTTT panB 876858 - 876058 - | 3-methyl-2-oxobutanoate hydroxymethyltransferase folK 877603 - 877124 - | 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokina se, PPPK pcnB 879077 - 877611 - | poly(A) polymerase I TERM 926 878166 - 878204 + g 71 -6.7 -4.22948 | opp_overlap 878168 AAAATTACGGGCAAT CAGTGGGAATAGCGGCT GGAAA AGCTGGTATTCGCACAG TTTTAAATAGGTTTT TERM 927 879034 - 879055 + g 78 -5.7 -4.66537 | GGCACTTTATCTTTA CGGGCCTTG TCAT CACGGACCG TTTTGTCTTCGCGGA yadB 880161 - 879166 - | glutamyl-Q tRNA(Asp) synthetase TERM 928 880371 - 880413 + r 81 -10.7 -3.3676 | gap 1, opp_overlap 880377, overlap 880379 880404 GAAGGGGTCCAACAG T-TCAAACACGGTGCCGGAG AGGG CTCTGGCACCGTGTTACACA TTATGCCGTGTTACA TERM 929 880406 - 880377 - R 100 -17.9 -3.66803 | opp_overlap 880371 880379 880404 GTCCAACAGTTCAAA CACGGTGCCGGAG AGGG CTCTGGCACCGTG TTACACATTATGCCG TERM 930 880379 - 880404 + r 100 -16.9 -3.07233 | opp_overlap 880377, overlap 880371 CCAACAGTTCAAACA CGGTGCCGGAG AGGG CTCTGGCACCG TGTTACACATTATGC dksA 880896 - 880441 - | DnaK transcriptional regulator DksA sfsA 881824 - 881066 - | sugar fermentation stimulation protein A TERM 931 881502 - 881513 + g 91 -4.4 -5.53288 | opp_overlap 881502 TTGTAACCAGATAAT TCAG CAAT CTGA TTTTTTTCAATTGCC ligT 882512 - 881937 - | putative 2'-5' RNA ligase hrp 882556 - 885156 + | ATP-dependent RNA helicase HrpB TERM 932 886256 - 886272 + G 70 -7.9 -3.80094 | GTGACCAAATCCGTG GCTTCCC GCT GGGTAGC TTGTATTACTTTGGC mrcB 885265 - 887745 + | penicillin-binding protein 1b TERM 933 887768 - 887801 + F 100 -8.7 -5.95539 | overlap 887769 887770 GGTCAATAAAATGTG ACGGCGGGCGTGGTT TACA GACTGCGCCCGCCAA TTTTTTTCTTTGCGC TERM 934 887769 - 887800 + F 100 -12.2 -4.15696 | overlap 887768 887770 GTCAATAAAATGTGA CGGCGGGCGTGGTT TACA GACTGCGCCCGCCA ATTTTTTTCTTTGCG TERM 935 887770 - 887799 + F 100 -15.7 -3.07791 | overlap 887769 887768 TCAATAAAATGTGAC GGCGGGCGTGGTT TACA GACTGCGCCCGCC AATTTTTTTCTTTGC TERM 936 888826 - 888848 + G 75 -3.2 -5.12172 | overlap 888817 888830 GGCATTTTACCGCAC CCGGCTGGCG GTG CGCCGGTAAG TTTTGTTTATTAATG fhuC 888067 - 888861 + | iron-hydroxamate transporter ATP-binding subunit fhuD 888861 - 889913 + | iron-hydroxamate transporter substrate-binding subunit TERM 937 891861 - 891873 + G 79 -3.3 -5.20222 | TATTAGCGACATTTA TCGGG GCG CCCTA TTTTGTTTATTTGCT fhuB 889910 - 891907 + | iron-hydroxamate transporter permease subunit TERM 938 892028 - 892011 - T 80 -9.9 -3.58343 | opp_overlap 892005 892004 GTCAGCAGTCTGAAA TCTCCTC CGGA GAGGAGA TTAGAGGTTATTGAC hemL 893561 - 892281 - | glutamate-1-semialdehyde aminotransferase TERM 939 892533 - 892500 - G 74 -9 -3.69934 | gap 2, opp_overlap 892500 892528 AAAGAATAGGCCAAA CATCCCACCGACGTGG TTAA CCAC--CAGTGGGATG TTCTCCTCTTTAGCG TERM 940 894488 - 894507 + G 76 -11.4 -2.83522 | opp_overlap 894480, overlap 894487 TTAGCAACCGGTGCA GCCGCAGG GCTG TCTGCGGC ATTTAATGCCCCGCT TERM 941 894925 - 894940 + G 81 -7.6 -4.56117 | GGCAGCCGGTAATTT CAGCAT CGGC ATGCTG TTGTTTATTTTTATC yadQ 893942 - 895378 + | chloride channel protein yadR 895514 - 895858 + | iron-sulfur cluster insertion protein ErpA TERM 942 896081 - 896104 + T 100 -8.8 -5.31275 | opp_overlap 896081 AGCATCGCTAAAAAA CCGTGACCAT GAGA ATGGCCGCGG TTTTTTATGCTCAAA TERM 943 896104 - 896081 - T 100 -8.8 -5.03715 | opp_overlap 896081 AGCATCGCTAAAAAA CCGTGACCAT GAGA ATGGCCGCGG TTTTTTATGCTCAAA yadS 896757 - 896143 - | hypothetical protein yadT 897599 - 896757 - | vitamin B12-transporter protein BtuF mtn 898300 - 897599 - | 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase dgt 898611 - 900131 + | deoxyguanosinetriphosphate triphosphohydrolase htrA 900329 - 901774 + | serine endoprotease TERM 944 901872 - 901896 + T 100 -9.3 -5.15526 | TTCCATTTAGCTCAA GGGCACAGT TTATCTC GCTGTGCCC TTTTTGGTTTTCTAT barA 904761 - 901933 - | hybrid sensory histidine kinase BarA TERM 945 906629 - 906603 - g 73 -5 -4.68994 | ATTATCACTCAAAAA CAGCCAAACCCA AGC CGTGACTGGCTG AATCCTAACCTCGGT TERM 946 907054 - 907072 + G 72 -6 -4.36914 | GTTGCCAGCCGATCC CCGGTGAT CAA ATTATCGG TTTTATCACGCAAGG relA 905205 - 907439 + | GDP/GTP pyrophosphokinase YPTB0752 907489 - 907653 + | hypothetical protein mazG 907660 - 908502 + | nucleoside triphosphate pyrophosphohydrolase pyrG 908714 - 910351 + | CTP synthetase TERM 947 910366 - 910389 + F 95 -13.1 -3.02109 | AAATATTTGGTGGTA GGGGGCGGC TGAGAT GTCGCCCCC TCTGTCTGGAGTTTT eno 910432 - 911727 + | phosphopyruvate hydratase TERM 948 911818 - 911793 - f 74 -10.5 -2.67166 | opp_overlap 911799, overlap 911799 AGTTAACTAATTAAT TAAAAACCCGC TTCG GCGGGTTTTTT TATGTGTTGATTTTG TERM 949 911799 - 911812 + F 100 -9.5 -5.80248 | opp_overlap 911793 911799 CTAATTAATTAAAAA CCCGC TTCG GCGGG TTTTTTTATGTGTTG TERM 950 911812 - 911799 - f 100 -9.5 -4.93547 | opp_overlap 911799, overlap 911793 CTAATTAATTAAAAA CCCGC TTCG GCGGG TTTTTTTATGTGTTG sodC 912099 - 912668 + | superoxide dismutase precursor (Cu-Zn) TERM 951 912687 - 912708 + F 82 -10.2 -3.72576 | opp_overlap 912687 TCTGATACAGTTAAA CTGGCTAC CCGAGC GTAGCCAG TTTGGTGGAGGCCGG TERM 952 912708 - 912687 - f 86 -10.2 -3.74077 | opp_overlap 912687 TCTGATACAGTTAAA CTGGCTAC CCGAGC GTAGCCAG TTTGGTGGAGGCCGG TERM 953 912824 - 912841 + G 82 -5.5 -5.13741 | AGGGCGAGGGTTATT TCACTGG CGTT CCAGCGA TTTTTGTTCGCTTGC ygcF 912772 - 913443 + | coenzyme PQQ synthesis protein ygcM 913879 - 913520 - | putative 6-pyruvoyl tetrahydrobiopterin synthase family protein TERM 954 915266 - 915252 - g 74 -6.4 -4.431 | overlap 915254 915255 TATTGACGGACAAAA TATGCC ACT GGCACA GGCGCTGCTCAGTCA cysJ 914272 - 916128 + | sulfite reductase subunit alpha cysI 916128 - 917858 + | sulfite reductase subunit beta cysH 917855 - 918589 + | phosphoadenosine phosphosulfate reductase TERM 955 918633 - 918613 - T 100 -14.7 -3.14931 | TCTATGGCTCATTAA GAGGGCGCT AAG AGCGCCCCC AGACTGCTGACAAAC TERM 956 918720 - 918694 - T 84 -10.1 -3.82218 | gap 1, opp_overlap 918703, overlap 918695 918710 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 957 918721 - 918695 - T 72 -10.1 -2.88849 | gap 1, opp_overlap 918703, overlap 918694 918710 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT YPTB0762 919239 - 918832 - | hypothetical protein TERM 958 919193 - 919211 + g 71 -7.4 -4.11216 | opp_overlap 919193 ATATCGGGGAAATAA CCGTCGAA TCC TTCAACGG TTTTGAAGATGAAAA TERM 959 919211 - 919193 - G 79 -9.6 -3.91984 | opp_overlap 919193 ATATCGGGGAAATAA CCGTCGAA TCC TTCAACGG TTTTGAAGATGAAAA YPTB0763 919614 - 919414 - | hypothetical protein TERM 960 919632 - 919660 + H 100 -15.5 -3.1085 | GAACCCCCTGGTGAG CTACTTGTGGGTA TCA TACCTACAAGTAG TATTGAGTCAATTAG TERM 961 919744 - 919724 - H 93 -9.7 -4.37991 | opp_overlap 919723 919719 GAAAAACACGGAAAA GGGCGATCA TAA TGATCGTCC ATGCCTTGAATTTAT TERM 962 921182 - 921192 + G 71 -8.2 -3.62096 | AAGTTGTGGCGCAAG CGGG GAT CCCG TTTCAGGTGGTACCG cysG 920227 - 921645 + | siroheme synthase, catalyses four separate reactions required for the transformation of uroporphyrinogen III into siroheme TERM 963 921887 - 921913 + G 70 -8 -3.83844 | TATGAATTTCGCGAT CACACGGTCAAA GAG TTTGGCTGTGAG TTGTTGGTTCATCGC cysD 921656 - 922564 + | sulfate adenylyltransferase subunit 2 TERM 964 923769 - 923754 - g 71 -4.6 -4.56775 | overlap 923756 AGTGGCGGGTAAAAA GACCCG AGCG CGGGTT GAAAACATTCAATAT cysN 922657 - 924093 + | sulfate adenylyltransferase subunit 1 cysC 924095 - 924736 + | adenylylsulfate kinase ygbE 924927 - 925244 + | hypothetical protein ftsB 925561 - 925881 + | cell division protein FtsB ispD 925885 - 926610 + | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ispF 926749 - 927237 + | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase TERM 965 927496 - 927482 - g 91 -11.4 -4.07885 | TATGCGGGGTTAAAA GACCGC CAT GCGGTC ACCGAACAGTGGTTT TERM 966 928213 - 928228 + G 77 -10.4 -3.54129 | TGAGCTGAGTTTCTG GCTCCC TGCG GGGAGC TTTGCGACCAGTGTA truD 927248 - 928297 + | tRNA pseudouridine synthase D TERM 967 928681 - 928696 + G 71 -6.8 -4.21631 | ATTATGATACGGCGG CGGCAG TGAC TTGCCG TTTATTACGTGCGTT surE 928275 - 929039 + | stationary phase survival protein SurE TERM 968 929110 - 929096 - g 79 -11.4 -3.22298 | GGTATTCACGACGAA CGCCTG TTA CAGGCG ATCGAAGCGGTACCG pcm 929033 - 929659 + | protein-L-isoaspartate O-methyltransferase TERM 969 930006 - 930023 + G 73 -5.5 -4.57474 | overlap 930008 AATACCTATACCGTT AAGCGTG GTGA CACGCTG TTTTATATCGCTTGG TERM 970 930008 - 930021 + G 70 -8.1 -3.89301 | overlap 930006 TACCTATACCGTTAA GCGTG GTGA CACGC TGTTTTATATCGCTT TERM 971 930315 - 930340 + G 78 -11.9 -3.01712 | opp_overlap 930301 ATGTTGCCATCATCT GGTGCGGTTGT CGCT ACAACAGCACC TGTTACCGCACCAAG nlpD 929763 - 930764 + | lipoprotein NlpD rpoS 930819 - 931817 + | RNA polymerase sigma factor RpoS TERM 972 931920 - 931947 + T 100 -7.1 -5.63504 | opp_overlap 931920 GATGAAACACAACAA CGGTGAACA GATAGATAAA TGTTCACCG TTTTTTTATGCCCTT TERM 973 931947 - 931920 - T 72 -7.1 -4.05193 | opp_overlap 931920 GATGAAACACAACAA CGGTGAACA GATAGATAAA TGTTCACCG TTTTTTTATGCCCTT TERM 974 932069 - 932048 - T 84 -10.1 -3.74693 | TGCCACCGTATTAAA GGTGATCGC TCAG GCGGTCACC GAACTCGATAATAAA tnpA 933251 - 932043 - | putative transposase-like protein TERM 975 933568 - 933539 - R 81 -9.3 -3.76607 | opp_overlap 933539 933541 GAACAGAGACGGAAA CCTGCGGCTAAAA ATGA TTTCAGCCGCGAG TTTTTAGCTTACACC TERM 976 933539 - 933568 + r 81 -7.1 -4.74103 | opp_overlap 933539, overlap 933541 GAACAGAGACGGAAA CCTGCGGCTAAAA ATGA TTTCAGCCGCGAG TTTTTAGCTTACACC mutS 936132 - 933577 - | DNA mismatch repair protein TERM 977 935096 - 935114 + g 73 -8.8 -3.91897 | opp_overlap 935094 ATACGTTCTAAATCG CCCACTTG TCT CAAGGGGG TTTGTAACTCGGCGG TERM 978 936726 - 936708 - R 71 -6.6 -4.18351 | overlap 936712 AAAGCAAATCAGAAA TGAAGGGC ACT GCCCCGCA TCTGAGCTGAAAGAT TERM 979 936722 - 936712 - R 73 -8.2 -3.67022 | overlap 936708 CAAATCAGAAATGAA GGGC ACT GCCC CGCATCTGAGCTGAA rpiB 937430 - 936975 - | ribose-5-phosphate isomerase B TERM 980 937563 - 937587 + H 80 -10.1 -3.69364 | opp_overlap 937558 937568, overlap 937567 TAAAACCAAGTCTTT CAAAAGATCAC CAT GTGATCATTTG TTATATATATTCAAT TERM 981 937567 - 937583 + H 70 -5.1 -4.45484 | opp_overlap 937558 937568, overlap 937563 ACCAAGTCTTTCAAA AGATCAC CAT GTGATCA TTTGTTATATATATT TERM 982 937582 - 937568 - H 79 -8.6 -4.09739 | opp_overlap 937567 937563, overlap 937558 CCAAGTCTTTCAAAA GATCAC CAT GTGATC ATTTGTTATATATAT ydjJ 937913 - 939028 + | putative Zinc-binding dehydrogenase YPTB0781 939092 - 939862 + | short chain dehydrogenase TERM 983 940011 - 940000 - g 72 -5.8 -4.42619 | opp_overlap 939999 GAAGAGGCGATAAAA GGCT ATTT AGCC GCTTATCCACATTTT TERM 984 940161 - 940206 + G 73 -5.3 -4.58685 | overlap 940189 940190 TAAAAATATGCTGGA TGCCGTAGCGGTTGGTGAG ATCTTCTC CTCCCCGGCGGCTGGGGCA TTTTTAGAAGCGTTT YPTB0782 939949 - 940950 + | putative dihydroxyacetone kinase YPTB0783 940957 - 941631 + | putative dihydroxyacetone kinase protein YPTB0784 942711 - 941752 - | putative transcriptional regulatory protein TERM 985 942052 - 942070 + g 72 -6 -4.4773 | AGGAGTGAACCAGCC CAGCTCTA CCA TATAGCTG TTTTCGTTCATATCA TERM 986 942915 - 942929 + r 75 -2.2 -5.33131 | overlap 942896 AATCAGTAACTGGTC TTTAAT TTT GTTAAA TTTGTTTTTTTATTA TERM 987 943164 - 943140 - R 72 -6.3 -4.2558 | overlap 943141 943155 GATCCTTCATCAAAA TGCCAGGAGAG TAA CCCTACTGGCG GCAATGCTAATAGGC TERM 988 943163 - 943141 - R 74 -9.8 -3.15027 | overlap 943140 943155 ATCCTTCATCAAAAT GCCAGGAGAG TAA CCCTACTGGC GGCAATGCTAATAGG arsB 944567 - 943278 - | arsenical efflux pump/H+ antiporter, arsB TERM 989 944560 - 944549 - G 70 -2.2 -4.9218 | TAGTCAGGATAAAAA TAGC ACCA GCCA ACAACATAACGCCTC arsR 944993 - 944652 - | DNA-binding transcriptional repressor ArsR YPTB0787 945518 - 945240 - | hypothetical protein TERM 990 945735 - 945756 + r 86 -3.1 -5.69068 | opp_overlap 945739, overlap 945739 AAGCTGTAAAGTCAT TAATTTCAT CTCA ATGAATTTA TTTTTTATCTTTTTA YPTB0788 945920 - 945714 - | hypothetical protein TERM 991 945739 - 945752 + g 80 -3.9 -5.19003 | opp_overlap 945739, overlap 945735 TGTAAAGTCATTAAT TTCAT CTCA ATGAA TTTATTTTTTATCTT YPTB0789 947111 - 946341 - | amino acid ABC transporter perplasmic-binding protein yhjA 948555 - 947176 - | putative cytochrome C peroxidase YPTB0791 949046 - 948792 - | hypothetical protein YPTB0792 949215 - 951311 + | putative exogenous ferric siderophore receptor; Iha adhesin TERM 992 951544 - 951522 - f 70 -7.7 -3.62255 | opp_overlap 951521, overlap 951518 TTCAAGAAGAACTAA CCGGCCTTT TATCC AAAGGCGGG CTGAATTGGAATTCA YPTB0793 951753 - 952940 + | hypothetical protein TERM 993 953127 - 953095 - T 100 -13.6 -3.08073 | opp_overlap 953104 953106, overlap 953105 AGCAGCGCTAATACA TCTGCAGAATGGAG GATAA CTTCATTCTGCAGA CAACCCCCGATGACG TERM 994 953203 - 953179 - T 82 -7.8 -4.4261 | gap 1, opp_overlap 953181, overlap 953180 953181 GGCCGAAGAGTAAAA CGTCCGCGCCA GAGA TGGCGCGG-CT TGAATGGCATTCAGG TERM 995 953202 - 953180 - T 86 -11.3 -3.25084 | gap 1, opp_overlap 953181, overlap 953179 953181 GCCGAAGAGTAAAAC GTCCGCGCCA GAGA TGGCGCGG-C TTGAATGGCATTCAG TERM 996 953181 - 953202 + T 84 -11.5 -3.07994 | opp_overlap 953180 953179 953181 CCGAAGAGTAAAACG TCCGCGCCA GAGA TGGCGCGGC TTGAATGGCATTCAG TERM 997 953202 - 953181 - T 79 -11.5 -2.54568 | opp_overlap 953181, overlap 953180 953179 CCGAAGAGTAAAACG TCCGCGCCA GAGA TGGCGCGGC TTGAATGGCATTCAG map 954065 - 953280 - | methionine aminopeptidase YPTB0795 954367 - 954062 - | hypothetical protein TERM 998 954396 - 954428 + r 100 -17.8 -3.15579 | opp_overlap 954396 954425, overlap 954388 CACTGAAACGGAAAA GGCCTGAGCTCCGT GAATG ACGGAACTCAGGCC TTGATAGCCGCTTAA TERM 999 954428 - 954396 - R 100 -20 -4.36595 | opp_overlap 954388 954396, overlap 954425 CACTGAAACGGAAAA GGCCTGAGCTCCGT GAATG ACGGAACTCAGGCC TTGATAGCCGCTTAA fumA 956140 - 954497 - | fumarase A (fumarate hydratase class I), aerobic isozyme TERM 1000 955773 - 955789 + g 75 -3.6 -5.03715 | overlap 955775 GCATCGTTACCCCCA GTCCAG ACCCG CTGGCC TTTTTTGCCCATGAT TERM 1001 956383 - 956406 + r 72 -9.6 -3.09823 | opp_overlap 956379, overlap 956377 GGCTTAAGCGACGGT TCCACCCTCT TTAT AAAGGGTGGA TCTCATTTTCCGCAC sgbK 958034 - 956538 - | putative L-xylulose kinase sgbU 958926 - 958045 - | putative L-xylulose 5-phosphate 3-epimerase TERM 1002 958879 - 958893 + g 74 -4.2 -4.87807 | TTCGACCCAACTGGT GCCC GCAGGTA GGGC TTTTTCGTATATTCC TERM 1003 959122 - 959104 - R 72 -7.4 -4.0641 | opp_overlap 959087 GTTTATCTACATAAA CAGTTAGC TGC GCTCACTG GAATCCCAATCACTT YPTB0799 960168 - 959107 - | putative ABC sugar transporter, permease subunit YPTB0800 961170 - 960181 - | putative ABC sugar transporter, permease subunit YPTB0801 962677 - 961163 - | sugar ABC transporter ATPase TERM 1004 962280 - 962259 - G 72 -5.8 -4.3586 | GGATCGAGACTAAAA GCCAGTTC ATGCAA GATCTGGC AGGCTTTTTGTTTGA YPTB0802 963833 - 962826 - | putative ABC transporter, periplasmic sugar binding protein YPTB0803 964800 - 963991 - | DeoR family transcriptional regulator TERM 1005 964640 - 964662 + g 100 -4.9 -5.75342 | AGTGCGACAGCGCCG CCAAAACTG CGGAT CAGTTTTTG TTTTTTTTGCAACAC TERM 1006 965450 - 965472 + H 100 -8.5 -4.93365 | opp_overlap 965450 CGATTAGTTAAATAA CGTCATTCG AATAC CGAATGATG TTTTTCATTATCGCC araD 965521 - 966216 + | L-ribulose-5-phosphate 4-epimerase dmsA 966666 - 969116 + | anaerobic dimethyl sulfoxide reductase, subunit A dmsB 969128 - 969745 + | anaerobic dimethyl sulfoxide reductase, subunit B dmsC 969747 - 970607 + | anaerobic dimethyl sulfoxide reductase, subunit C TERM 1007 970632 - 970658 + F 100 -15.3 -3.85092 | GGCGACGACACTTTG GCTATTCTGGG GAGCG CCCAGAATAGC TTTGCTCTGCCTCAT TERM 1008 970846 - 970858 + G 85 -2.6 -5.55769 | GGACTAACGGGGCGA GTGC TAGGT GCGC TTTTTTATTGTGAGC YPTB0808 970753 - 971463 + | twin-argninine leader-binding protein DmsD TERM 1009 971687 - 971668 - T 85 -9.2 -4.09685 | TTGCATTCTTTAAAA TGTCCCGC AAAC GCGGGGCA AAGAGAAACGGAACA cybB 972251 - 971721 - | cytochrome b561 cybC 972781 - 972398 - | putative cytochrome b(562) TERM 1010 972814 - 972860 + r 82 -6.9 -4.77122 | gap 2, opp_overlap 972822 972826, overlap 972817 972818 972822 972826 TTATGATTTTCTTCT CTTA-TAAATAGAGGGG-GGA AGATAAA TCCTCCCCTCTATTTAGTTAG TTATTTTTTATATCA TERM 1011 972817 - 972856 + r 78 -8.8 -3.81144 | gap 1, opp_overlap 972822 972826, overlap 972814 972818 972822 972826 TGATTTTCTTCTCTT ATAAATAGAGGGG-GGA AGATAAA TCCTCCCCTCTATTTAG TTAGTTATTTTTTAT TERM 1012 972818 - 972855 + r 89 -12.3 -2.86246 | gap 1, opp_overlap 972822 972826, overlap 972817 972814 972822 972826 GATTTTCTTCTCTTA TAAATAGAGGGG-GGA AGATAAA TCCTCCCCTCTATTTA GTTAGTTATTTTTTA TERM 1013 972822 - 972851 + r 80 -8.7 -4.05045 | gap 1, opp_overlap 972822 972826, overlap 972818 972817 972814 972826 TTCTTCTCTTATAAA TAGAGGGG-GGA AGATAAA TCCTCCCCTCTA TTTAGTTAGTTATTT TERM 1014 972851 - 972822 - R 78 -8.7 -3.85698 | gap 1, opp_overlap 972818 972817 972814 972822 972826, overlap 972826 TTCTTCTCTTATAAA TAGAGGGG-GGA AGATAAA TCCTCCCCTCTA TTTAGTTAGTTATTT TERM 1015 972826 - 972849 + r 75 -8.8 -3.59634 | opp_overlap 972826 972822, overlap 972822 972818 972817 972814 TCTCTTATAAATAGA GGGGGGAAGA TAAA TCCTCCCCTC TATTTAGTTAGTTAT TERM 1016 972849 - 972826 - R 71 -8.8 -3.3353 | opp_overlap 972822 972818 972817 972814 972826, overlap 972822 TCTCTTATAAATAGA GGGGGGAAGA TAAA TCCTCCCCTC TATTTAGTTAGTTAT katY 975070 - 972857 - | catalase; hydroperoxidase HPI(I) TERM 1017 973568 - 973579 + g 74 -4.4 -4.91109 | CTCTGCGGGATCGTT GACT GGCC AGTC TTTTTGTGGTGCCAG TERM 1018 976304 - 976293 - g 73 -7.2 -4.2679 | GAAGCCGCATTAAAA GCGG CGGG CCGC AATGATGTGGTGGTG TERM 1019 976462 - 976450 - g 80 -9.1 -4.15833 | ATCAGTATCTGAAAA CCGGT AAA ACCGG TCTGGAAGAGAAACA YPTB0812 975606 - 976547 + | ABC transporter, periplasmic sugar binding protein TERM 1020 976604 - 976625 + F 89 -11.5 -3.53761 | opp_overlap 976607, overlap 976605 976607 976619 976620 CCGCTTTAGCCGTAA TGAGGGGCG ACAT CGCCCCTCC TTTCAGGAGGCATTA TERM 1021 976605 - 976624 + F 100 -15 -2.72043 | opp_overlap 976607, overlap 976604 976607 976619 976620 CGCTTTAGCCGTAAT GAGGGGCG ACAT CGCCCCTC CTTTCAGGAGGCATT TERM 1022 976622 - 976607 - f 83 -11.8 -2.72344 | opp_overlap 976605 976604 976607 976619 976620 CTTTAGCCGTAATGA GGGGCG ACAT CGCCCC TCCTTTCAGGAGGCA TERM 1023 976607 - 976622 + F 86 -11.8 -2.90496 | opp_overlap 976607, overlap 976605 976604 976619 976620 CTTTAGCCGTAATGA GGGGCG ACAT CGCCCC TCCTTTCAGGAGGCA YPTB0813 976640 - 977257 + | hypothetical protein TERM 1024 978320 - 978304 - g 90 -7.9 -5.09173 | opp_overlap 978304 GAAGATCGTAAAAAA GCCGGGA TTT TCCCTGC TTCATCGGTCGCCTG YPTB0814 977257 - 978780 + | sugar ABC transporter ATPase YPTB0815 978777 - 979904 + | ABC sugar transporter, permease subunit TERM 1025 980486 - 980460 - g 73 -3.7 -4.89567 | gap 1, opp_overlap 980481, overlap 980455 980461 980462 CTGTAAAACACAAAA CGCCAGGCATTG AACT CAATACCGGG-G CTTTAGGGCACGGTT TERM 1026 980684 - 980672 - g 77 -4.8 -5.00267 | AACGACAAAAATAAA CTGC AACTG GCAG GGACCACTAAATCAA YPTB0816 980123 - 980953 + | putative N-terminal region of transketolase YPTB0817 980946 - 981890 + | C-terminal region of transketolase TERM 1027 982204 - 982164 - g 79 -10.5 -3.66178 | gap 2, opp_overlap 982165, overlap 982165 TTTGGGAACGGGAAA CCGGCAC-GCC-GCTCACG CCAGT CGTAAGCTGGCAGTGCCGT CGTTCAGAGGCTTTC TERM 1028 982203 - 982165 - g 88 -14 -2.79492 | gap 2, opp_overlap 982165, overlap 982164 TTGGGAACGGGAAAC CGGCAC-GCC-GCTCACG CCAGT CGTAAGCTGGCAGTGCCG TCGTTCAGAGGCTTT TERM 1029 982165 - 982203 + G 75 -11.8 -2.7186 | gap 2, opp_overlap 982165 982164 TTGGGAACGGGAAAC CGGCAC-GCC-GCTCACG CCAGT CGTAAGCTGGCAGTGCCG TCGTTCAGAGGCTTT TERM 1030 983353 - 983364 + G 71 -7.2 -4.07885 | CTGGCAAACGGCCAT CGCG CGTG CGCG TTTTCAGCCGAAATA YPTB0818 981893 - 983380 + | putative glycerol kinase 2 YPTB0819 983401 - 984825 + | hypothetical protein TERM 1031 985005 - 985020 + T 76 -10.4 -3.0395 | opp_overlap 985000 AAGAGTAAAGTGTCC GCCCCA TGGC TGGGGC TGTTAACCAATATGT YPTB0820 985991 - 985047 - | putative transcriptional regulatory protein YPTB0821 987579 - 986239 - | putative MFS tranporter TERM 1032 987124 - 987105 - G 71 -9.3 -3.59233 | overlap 987101 TAACCATTAAAGTAA TCAGCCC CAGCGC GGGCTGA AACATAAGCACCACC TERM 1033 987681 - 987697 + H 100 -10.9 -4.41548 | opp_overlap 987694 ATCATGATTTTTTAT CCCCTTT TAA AAAGGGG TTTTCTCCCCTCTCA TERM 1034 987707 - 987694 - H 70 -5.2 -4.56775 | opp_overlap 987681 ATCCCCTTTTAAAAA GGGG TTTTCT CCCC TCTCACCGCTATTCG TERM 1035 987963 - 987953 - g 71 -6.8 -4.27465 | CATAAGTTAAAAGAA CACG GTG CGTG GGTGACCTGTGCAGA ygaD 987896 - 988384 + | competence damage-inducible protein A TERM 1036 989455 - 989437 - g 77 -3.8 -5.10933 | opp_overlap 989438, overlap 989439 CTATTTAAAAGAAAA CCCAGC CATTGCT GCTGAG TTAGATAAAAAACTG recA 988499 - 989569 + | recombinase A TERM 1037 989628 - 989597 - f 100 -16 -3.73953 | opp_overlap 989597 989601, overlap 989601 ACCAGTTGGAGTAAA CAAACAGACCGTCA CTTG TGGCGGTCTGTTTG TTTGAGTAAATAACA TERM 1038 989597 - 989628 + F 100 -18.2 -3.6682 | opp_overlap 989597 989601, overlap 989601 ACCAGTTGGAGTAAA CAAACAGACCGTCA CTTG TGGCGGTCTGTTTG TTTGAGTAAATAACA TERM 1039 989624 - 989601 - f 100 -11 -4.49556 | opp_overlap 989601 989597, overlap 989597 GTTGGAGTAAACAAA CAGACCGTCA CTTG TGGCGGTCTG TTTGTTTGAGTAAAT TERM 1040 989601 - 989624 + F 100 -13.2 -4.46514 | opp_overlap 989597 989601, overlap 989597 GTTGGAGTAAACAAA CAGACCGTCA CTTG TGGCGGTCTG TTTGTTTGAGTAAAT TERM 1041 989711 - 989701 - f 76 -6.8 -4.41494 | opp_overlap 989710 TAGCGGTAAGTAAAA GGGT GTT ACCC AAAGTAATTGGTGTT TERM 1042 989835 - 989825 - f 86 -6.8 -4.93968 | opp_overlap 989834 AGCGACAAGTAAAAA GGGT GTT ACCC AAAGTAATTGGTGTT recX 989955 - 990503 + | recombination regulator RecX TERM 1043 992573 - 992560 - g 76 -2.3 -5.27335 | opp_overlap 992561, overlap 992561 GCGGCGAAAGAAAAA GGTGC AATG GCACT GTTCGGCGAGAAGTA alaS 990643 - 993270 + | alanyl-tRNA synthetase TERM 1044 993319 - 993293 - f 74 -9.4 -3.35849 | opp_overlap 993293, overlap 993291 TCTATTAAATCAACA CGCCATATCTCG GTA CTAGGTATGGCG TTTTTTAATTTTCCT TERM 1045 993293 - 993319 + F 100 -11.6 -5.48054 | opp_overlap 993293 993291 TCTATTAAATCAACA CGCCATATCTCG GTA CTAGGTATGGCG TTTTTTAATTTTCCT csrA 993520 - 993705 + | carbon storage regulator TERM 1046 993710 - 993744 + F 100 -15 -5.27206 | opp_overlap 993716, overlap 993713 CGACTTACTGATTTT GAAGCAGCGTCTCGTG TAA CACGAGGCGCTACTGC TTTTTATTGTCTCTA TERM 1047 993713 - 993741 + F 100 -15.3 -3.43245 | opp_overlap 993716, overlap 993710 CTTACTGATTTTGAA GCAGCGTCTCGTG TAA CACGAGGCGCTAC TGCTTTTTATTGTCT TERM 1048 993738 - 993716 - f 93 -13.4 -2.72463 | opp_overlap 993713 993710 ACTGATTTTGAAGCA GCGTCTCGTG TAA CACGAGGCGC TACTGCTTTTTATTG TERM 1049 994658 - 994642 - f 76 -10.9 -2.69468 | overlap 994639 994654 CAGCTGGATAGAGTA CTCGGTT ACG AACCGAG TGGTCGGAAGTTCGA TERM 1050 994708 - 994693 - f 73 -9 -3.52102 | overlap 994707 AGCGTAGCGAGACAA CGTTGC TTTA GCAACG GCCCGTAGGGCGAGG TERM 1051 994765 - 994780 + F 91 -8.2 -4.67635 | opp_overlap 994765, overlap 994775 CACCATATTAAGGAA CCTCGC TATA GCGGGG TTTTCTGCTTTTGGC yqaB 995005 - 995571 + | fructose-1-phosphatase TERM 1052 995688 - 995668 - g 70 -9.7 -3.16564 | opp_overlap 995665 995662 TGGTCACCCTATTAA CTGCGGG TAGTGCG CCCGCAG CGATATTGGTGTTAT yqaA 995568 - 995996 + | putative integral membrane protein gshA 996079 - 997638 + | glutamate--cysteine ligase TERM 1053 997665 - 997648 - f 100 -11.3 -5.55001 | CAATAAAAAAGAAAA GGCCACA TCAC TGTGGCC AAATTAACATCTCTA luxS 997806 - 998321 + | S-ribosylhomocysteinase TERM 1054 998355 - 998372 + T 87 -4.8 -5.46657 | opp_overlap 998355 998350 998357 AGGAGAATGATAAAA GGCGCT GATTAA AGCGTC TTTTTTATTAAACTG yfjD 999600 - 998410 - | hypothetical protein ypjD 1000655 - 999762 - | hypothetical protein TERM 1055 1001179 - 1001167 - g 74 -9.1 -3.62518 | opp_overlap 1001167 TCAAACAGTTGGAAA CCCTG GCT CAGGG TGTTGGCATTGATTT TERM 1056 1001789 - 1001779 - g 71 -6.8 -4.26076 | opp_overlap 1001781 GTATGTTGAGTAAAA TGCC AGG GGCA GGTCAGTTGCCAGAA ffh 1000719 - 1002080 + | signal recognition particle protein TERM 1057 1002187 - 1002207 + F 70 -2.6 -5.00884 | opp_overlap 1002187 CAAAATGTGCGAACA GGAATCTA CGCTT TAGATTGC TTTTTTCGCCAAAAT TERM 1058 1002251 - 1002284 + F 100 -18.3 -4.67982 | GGGCTTTTTATATTG CAACTGGACCCCGTT CCCC GATGGGGTCCAGTTG TTTTATTAACTAAAG rpsP 1002308 - 1002556 + | 30S ribosomal protein S16 rimM 1002578 - 1003126 + | 16S rRNA-processing protein trmD 1003165 - 1003905 + | tRNA (guanine-N(1)-)-methyltransferase rplS 1003986 - 1004333 + | 50S ribosomal protein L19 TERM 1059 1004395 - 1004375 - T 86 -12.6 -2.52987 | opp_overlap 1004375, overlap 1004374 TTAATACTTATGAAG GGGCTAGC CATGT GCTAGCCC TTTTTTTATGCTCTA TERM 1060 1004375 - 1004395 + T 100 -12.6 -5.69473 | opp_overlap 1004375 1004374 TTAATACTTATGAAG GGGCTAGC CATGT GCTAGCCC TTTTTTTATGCTCTA TERM 1061 1004578 - 1004556 - T 74 -10.6 -2.69545 | opp_overlap 1004558, overlap 1004555 1004558 GGCAGAGAGGAGAAT TAGCGCGGTA TCA CACCACGCTA TATAGACGAATGGTG ydiY 1005363 - 1004596 - | hypothetical protein dcuB 1007029 - 1005686 - | anaerobic C4-dicarboxylate transporter YPTB0840 1008178 - 1007462 - | putative two-component response-regulatory protein YehT TERM 1062 1008498 - 1008485 - g 75 -5.3 -4.8143 | opp_overlap 1008477, overlap 1008477 1008489 GGAAGAACTGAAAAA TCAGT TTCC ACTGA GCGAAAATGATCAGT aroF 1008411 - 1009481 + | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 1063 1010466 - 1010480 + G 74 -10 -3.61517 | TACTACAAACGCTTT GGTGAG GCG CTCACC TTGTTAGAGCACCAT tyrA 1009494 - 1010615 + | bifunctional chorismate mutase/prephenate dehydrogenase TERM 1064 1010646 - 1010674 + T 100 -13.2 -5.69473 | GATAGATTTTTATAG GTCATCCCAGCA CAGCC TGCCGGGATGAC TTTTTTTATGGTGTG pheA 1011877 - 1010720 - | bifunctional chorismate mutase/prephenate dehydratase TERM 1065 1012007 - 1011990 - R 100 -12.7 -5.77988 | opp_overlap 1011990 ATATACATAAAAAAA GCCTCCC GCTT GGGAGGC TTTCTTGTTCGTCTT TERM 1066 1011990 - 1012007 + r 100 -12.7 -4.51224 | opp_overlap 1011990 ATATACATAAAAAAA GCCTCCC GCTT GGGAGGC TTTCTTGTTCGTCTT TERM 1067 1012210 - 1012195 - R 100 -11.8 -4.87291 | GATGTCAATTAAAAA CGCGCC CGAA GGCGCG TTACACCGAAATTAG yfiA 1012601 - 1012239 - | putative sigma 54 modulation protein TERM 1068 1012905 - 1012934 + r 74 -4.9 -4.77757 | opp_overlap 1012911, overlap 1012907 1012911 GTTGAAAACCTAAAT TGAAAACGGCAGC CTGA GCTGCCGTTGGTG TTTTCATTTTTCGGG TERM 1069 1012907 - 1012932 + r 72 -7.5 -3.99386 | opp_overlap 1012911, overlap 1012905 1012911 TGAAAACCTAAATTG AAAACGGCAGC CTGA GCTGCCGTTGG TGTTTTCATTTTTCG TERM 1070 1012928 - 1012911 - R 100 -12.7 -4.37198 | opp_overlap 1012907 1012905 1012911 AACCTAAATTGAAAA CGGCAGC CTGA GCTGCCG TTGGTGTTTTCATTT TERM 1071 1012911 - 1012928 + r 100 -12.7 -3.58476 | opp_overlap 1012911, overlap 1012907 1012905 AACCTAAATTGAAAA CGGCAGC CTGA GCTGCCG TTGGTGTTTTCATTT yfiO 1013687 - 1012956 - | outer membrane protein assembly complex subunit YfiO TERM 1072 1013788 - 1013778 - H 75 -8.2 -3.8766 | GCACATTATATTAAA CGGC ATC GCCG TCAAAACCCAACGTT rluD 1013823 - 1014800 + | 23S rRNA pseudouridine synthase D TERM 1073 1014838 - 1014851 + G 73 -9.5 -3.29144 | GATTGGCCGATGCCT GCCCG CGTC CGGGC TTGTAGCACCACTCG TERM 1074 1015214 - 1015239 + G 71 -10.4 -2.78793 | opp_overlap 1015214, overlap 1015211 GTGTTCTGGAACACA CGGTGGCGCA ATTCAA TGCGGCACCG TCCTCTCTTATGGCT TERM 1075 1015239 - 1015214 - g 72 -10.4 -3.06696 | opp_overlap 1015211 1015214 GTGTTCTGGAACACA CGGTGGCGCA ATTCAA TGCGGCACCG TCCTCTCTTATGGCT yfiH 1014802 - 1015533 + | hypothetical protein TERM 1076 1016289 - 1016265 - g 71 -5 -4.53777 | gap 1 TCGAACCAAAAATAA CCCAGTGCTGA TTGG TGAGC-CTGGG GTGGGTAAAACCGCT TERM 1077 1016969 - 1016956 - g 79 -2.3 -5.41143 | CAGGCCCTAAAAAAA GAGTC AGAT GACGC CAGTAAAAAACGGTT clpB 1015663 - 1018236 + | protein disaggregation chaperone TERM 1078 1018252 - 1018269 + T 100 -12.7 -5.80727 | TAGCTGATCCTCTAA GGGGCGA GAAA TCGCCCC TTTTTTGTTGTTTTT TERM 1079 1022112 - 1022094 - T 82 -10.3 -3.57798 | overlap 1022107 CATAAGTAACGATAA TGCGGGT GAAAA ACCCGCA CGCCGGAAGACCAAG TERM 1080 1022572 - 1022546 - T 70 -9.4 -2.75844 | opp_overlap 1022560 1022568, overlap 1022545 1022548 GGCGTTAGGTGAAAG GACTAGCTCCTG GAG CTGAAGCCAGTC GCAGATACCAGCTGG TERM 1081 1022619 - 1022608 - T 74 -4.4 -5.06816 | ACTGTTTAATAAAAA CACA GCAC TGTG CAAACACGAAAGTGG TERM 1082 1023731 - 1023741 + T 74 -6.8 -4.27316 | opp_overlap 1023731 GGCTTAACCTTACAA CACC GAA GGTG TTTTGAATTGAGAGA TERM 1083 1023997 - 1023963 - T 95 -9.2 -4.50627 | opp_overlap 1023970 CAGGCATCAAATAAA GCCAAGACCCCATGCC CAA AGCGTGGGGTTTTTGC TGTGCGCGAAACACA TERM 1084 1023970 - 1023990 + T 100 -10.4 -4.8048 | opp_overlap 1023963 CAAATAAAGCCAAGA CCCCATGC CCAAA GCGTGGGG TTTTTGCTGTGCGCG TERM 1085 1024036 - 1024056 + T 100 -10.4 -4.8048 | opp_overlap 1024033 GCGTTGTAATGATGA CCCCATGC CAAAA GCGTGGGG TTTTTGCTGTGCGCG TERM 1086 1024103 - 1024121 + T 95 -8.1 -5.21709 | opp_overlap 1024103 1024102 CGTTGTATTGATAAC CCCATGC CCAAA GCGTGGG TTTTTTGCTGTGCGC TERM 1087 1024168 - 1024188 + T 100 -10.4 -4.8048 | opp_overlap 1024168 ACGTTGTATTGATAA CCCCATGC CCAAA GCGTGGGG TTTTTGCTGTGCGCG TERM 1088 1024188 - 1024168 - T 71 -8.9 -3.35798 | opp_overlap 1024168 ACGTTGTATTGATAA CCCCATGCC CAA AGCGTGGGG TTTTTGCTGTGCGCG TERM 1089 1024234 - 1024254 + T 72 -6.1 -4.34402 | GCGTTGTAATGATGA CCCCATG CCAAAAA CGTGGGG TTTTGCTGTGCGCGA yfiM 1024747 - 1024406 - | hypothetical protein TERM 1090 1024777 - 1024793 + r 70 -3.6 -4.78848 | opp_overlap 1024777, overlap 1024769 AGTGGGAGATGAAAA CCCGCT AATTC ACCGGG TTTTATCTTTAAGAC pssA 1026167 - 1024809 - | phosphatidylserine synthase yfiQ 1028982 - 1026340 - | putative acyl-CoA synthetase, NAD(P)-binding, ATP-binding yfiP 1029774 - 1029025 - | hypothetical protein TERM 1091 1029819 - 1029792 - R 91 -8.6 -4.58395 | gap 1, opp_overlap 1029816 1029817, overlap 1029794 1029814 CGGACTCCTGAAAAA TAGCGCCATTCTA ATA TAGAATGGC-CCA CGCCCCGACAGAAAA TERM 1092 1029818 - 1029794 - R 95 -11.5 -3.90762 | opp_overlap 1029816 1029817, overlap 1029792 1029814 GACTCCTGAAAAATA GCGCCATTCTA ATA TAGAATGGCCC ACGCCCCGACAGAAA TERM 1093 1029816 - 1029849 + r 74 -6.5 -4.42653 | opp_overlap 1029794 1029792 1029814, overlap 1029817 TCTAATATAGAATGG CCCACGCCCCGACAG AAAA CTGGCAGGGGGTGGA TTTTATCAATGGCCT TERM 1094 1029817 - 1029848 + r 76 -10 -3.2511 | opp_overlap 1029794 1029792 1029814, overlap 1029816 CTAATATAGAATGGC CCACGCCCCGACAG AAAA CTGGCAGGGGGTGG ATTTTATCAATGGCC trxC 1030382 - 1029945 - | thioredoxin 2 TERM 1095 1030606 - 1030618 + H 77 -10.5 -3.14132 | opp_overlap 1030602 ACATCAGGTAATCTT CGCGC CCT GCGCG TTGGTGGAGAAGACA yfiF 1030634 - 1031806 + | putative methyltransferase TERM 1096 1031841 - 1031897 + T 100 -13.8 -3.40775 | opp_overlap 1031842 1031851 1031856, overlap 1031842 1031856 GAGCGACGTTTTAGA ACGGTAAAAATAAAAGGGGGCGCTGA TGAGT TCAGGGCCCCCTTTTTTGTTGACCGC TATTTGGCTAAAAAT TERM 1097 1031842 - 1031896 + T 100 -17.3 -2.64144 | opp_overlap 1031842 1031851 1031856, overlap 1031841 1031856 AGCGACGTTTTAGAA CGGTAAAAATAAAAGGGGGCGCTGA TGAGT TCAGGGCCCCCTTTTTTGTTGACCG CTATTTGGCTAAAAA TERM 1098 1031896 - 1031842 - T 100 -17.3 -3.30243 | opp_overlap 1031842 1031841 1031856, overlap 1031851 1031856 AGCGACGTTTTAGAA CGGTAAAAATAAAAGGGGGCGCTGA TGAGT TCAGGGCCCCCTTTTTTGTTGACCG CTATTTGGCTAAAAA TERM 1099 1031887 - 1031851 - T 100 -13.8 -4.6902 | opp_overlap 1031842 1031841 1031856, overlap 1031842 1031856 TTAGAACGGTAAAAA TAAAAGGGGGCGCTGA TGAGT TCAGGGCCCCCTTTTT TGTTGACCGCTATTT TERM 1100 1031882 - 1031856 - T 100 -13.7 -5.27023 | opp_overlap 1031842 1031841 1031856, overlap 1031851 1031842 ACGGTAAAAATAAAA GGGGGCGCTGA TGAGT TCAGGGCCCCC TTTTTTGTTGACCGC TERM 1101 1031856 - 1031882 + T 100 -13.7 -5.4505 | opp_overlap 1031856 1031851 1031842, overlap 1031842 1031841 ACGGTAAAAATAAAA GGGGGCGCTGA TGAGT TCAGGGCCCCC TTTTTTGTTGACCGC emrB 1033474 - 1031939 - | MFS multidrug efflux pump, emrB subunit emrA 1034685 - 1033513 - | multidrug efflux pump membrane fusion subunit EmrA TERM 1102 1034614 - 1034634 + g 85 -2.6 -5.55769 | gap 1 GGCCGTCAGCAACAG CAGTACACG TTTA CGT-TGCTG TTTTTTATTCTGCGG emrR 1035581 - 1035069 - | transcriptional repressor MprA ygaH 1036094 - 1035753 - | hypothetical protein ygaZ 1036864 - 1036091 - | LIV-E family branched chain amino acid exporter large subunit TERM 1103 1036525 - 1036515 - G 71 -4.6 -4.54727 | TCGGTTAAACCAAAA GCCC ATA AGGC CGTTTTTTTACCTGA YPTB0860 1038223 - 1037024 - | MFS sugar/multidrug efflux antiporter TERM 1104 1037712 - 1037683 - G 95 -15.1 -2.91695 | overlap 1037680 1037705 1037706 GGCAGCGCCAAAGGA CCAGTGCCATGAT AAAC ATCAAGGCACTGG CAACCCAATAAATGG TERM 1105 1038316 - 1038332 + r 78 -9.3 -3.59979 | GAGGCATTTTCGAGC GAGGGCC AAA GGCCCCC TTTGGAATGACAACC YPTB0861 1038914 - 1038447 - | hypothetical protein YPTB0862 1040340 - 1038943 - | amidase YPTB0863 1040540 - 1040337 - | hypothetical protein TERM 1106 1041632 - 1041615 - g 76 -9.1 -3.80877 | overlap 1041613 TTACTGCATAAAATA CTGGCAG AAGG CCGCCAG CGGATACATCAAATT YPTB0864 1040838 - 1041683 + | rpiR family transcriptional regulatory protein YPTB0865 1041685 - 1041900 + | hypothetical protein YPTB0866 1042011 - 1042799 + | putative amino acid ABC transporter, periplasmic protein YPTB0867 1042812 - 1043480 + | putative amino acid ABC transporter, permease protein YPTB0868 1043477 - 1044130 + | putative amino acid ABC transporter, permease protein YPTB0869 1044111 - 1044857 + | putative amino acid ABC transporter, ATP-binding protein YPTB0870 1044889 - 1046214 + | aminotransferase, class V TERM 1107 1046710 - 1046692 - g 74 -11 -2.84504 | overlap 1046689 1046687 AGTGGTTAAATACGA CCGATGCC GAT GGCATCAG TGTCGCGCAAGCGAT YPTB0871 1046214 - 1047497 + | allantoate amidohydrolase TERM 1108 1047568 - 1047549 - T 81 -12.2 -2.53715 | overlap 1047548 1047551 CTCATCAGGACTAAT GAGCCTCA TCCC TGAGGCTC CCCCCAAAGGTACCG yafV 1048368 - 1047598 - | hypothetical protein ybdL 1049516 - 1048356 - | putative aminotransferase TERM 1109 1048468 - 1048455 - G 74 -6.7 -4.38712 | overlap 1048465 CGGAGCTTCACAAAA TACCG ATAA CGGTA TTGCAGCAACGCCCA TERM 1110 1049726 - 1049715 - g 71 -7.2 -4.09685 | opp_overlap 1049725 CTGGATCGGCGAAAA GGGC TGGT GCCC GGCGACTGGCGGTAA YPTB0874 1049656 - 1050324 + | hypothetical protein YPTB0875 1050321 - 1051010 + | enolase-phosphatase E-1 YPTB0876 1051109 - 1051651 + | methionine salvage pathway enzyme E-2/E-2' eif 1052724 - 1051684 - | putative translation initiation factor EIF-2B, GDP-GTP exchange factor (alpha subunit) TERM 1111 1053408 - 1053394 - g 74 -2.7 -5.15969 | opp_overlap 1053395, overlap 1053395 GCGCAAGCGAAAAAA GCGGC GGTGA GCCGT TATACCAACCCGGAA TERM 1112 1053867 - 1053854 - g 76 -2.3 -5.18357 | overlap 1053861 TAAGTCAGGAAAAAA CACAG GATC CCGCG TTGGCGACGGAAGGT mtnK 1052920 - 1054143 + | methylthioribose kinase TERM 1113 1054217 - 1054227 + F 75 -2.4 -5.30155 | CAACGCCAATGACGT TGGG GAT CCCC TTTTTTACTTGATGC TERM 1114 1054341 - 1054351 + F 75 -2.4 -5.30155 | CAACGCCAATGACGT TGGG GAT CCCC TTTTTTACTTGATGG TERM 1115 1054444 - 1054429 - f 73 -9 -3.41359 | overlap 1054427 GCCTCAAAATTAATA GCCTCA TCCC TGAGGC TCAGACTGCTGACAA TERM 1116 1054533 - 1054507 - f 84 -10.1 -3.82218 | gap 1, opp_overlap 1054525, overlap 1054508 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCTTACATGGATG TERM 1117 1054534 - 1054508 - f 72 -10.1 -2.88849 | gap 1, opp_overlap 1054525, overlap 1054507 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCTTACATGGATGT TERM 1118 1054632 - 1054607 - f 93 -11.9 -3.62046 | overlap 1054608 GCACTTTGTCAATAA CCTGAGCCTCA TCCC TGAGGCTCAGC CTACGAGCTAGCATA TERM 1119 1054631 - 1054608 - f 100 -15.4 -2.77013 | overlap 1054607 CACTTTGTCAATAAC CTGAGCCTCA TCCC TGAGGCTCAG CCTACGAGCTAGCAT TERM 1120 1055125 - 1055161 + F 82 -2.4 -5.66989 | gap 1, overlap 1055122 TCAAATTGCTGTTTG CCGTAAACCTGTGAC GGCAATTA GTC-TAAGTTTACGG TTTTTTTAGTGTTTA rscB 1055346 - 1057136 + | TPS secretion family afimbrail adhesion TERM 1121 1057894 - 1057908 + G 70 -10 -3.1247 | ACTGTGCTGGCAGTC GGTCAC AGC GTGACC TTGAATCTGGACCAT TERM 1122 1058824 - 1058813 - g 76 -7.2 -4.33274 | overlap 1058797 1058815 CCGATATCACTAAAA CGGC GGGA GCCG ATGCGACGCTGACAT rscA 1057177 - 1063347 + | putative adhesin; involved in the adherence of host cells rcsC 1063502 - 1065355 + | putative accessory processing protein; involved in the adherence of host cells TERM 1123 1065425 - 1065444 + G 73 -7.9 -4.08216 | ACTTCATCGCTTGGT TGCCGAT ATCCCG ATCGGCA TTTTACAGCACATCA TERM 1124 1065605 - 1065621 + G 75 -10.1 -3.44284 | overlap 1065603 ACAGCGATTACTCGG GGCGCAG GGT TTGCGCC TATTGTTGATGGGGC YPTB0882 1065357 - 1066103 + | hypothetical protein TERM 1125 1066210 - 1066235 + T 93 -11.9 -3.62723 | opp_overlap 1066210, overlap 1066206 TTATTAAACATAAAA CTAAGCCTCCT TAAT GGGAGGCTTGG TTGATTATTTCGATA TERM 1126 1066235 - 1066210 - T 100 -9 -4.82128 | opp_overlap 1066206 1066210 TTATTAAACATAAAA CTAAGCCTCC TTAATG GGAGGCTTGG TTGATTATTTCGATA fadE 1068722 - 1066275 - | acyl-CoA dehydrogenase gmhA 1068962 - 1069543 + | phosphoheptose isomerase TERM 1127 1070473 - 1070452 - g 73 -8.7 -3.91084 | opp_overlap 1070452 TGACCGGTAATGAAA CCTGGCACA AAAT TGCACCAGG TGAATTTGCTTTATT yafJ 1069746 - 1070519 + | hypothetical protein yafK 1071224 - 1070484 - | hypothetical protein TERM 1128 1071496 - 1071480 - H 72 -6.5 -4.28049 | opp_overlap 1071489 CGGAAAATGCTAAAA TCACCCG CAG CTGGTGA CCTGCTTGTGTAATG nqrA 1071720 - 1073063 + | Na(+)-translocating NADH-quinone reductase subunit A nqrB 1073067 - 1074308 + | Na(+)-translocating NADH-quinone reductase subunit B nqrC 1074298 - 1075098 + | Na(+)-translocating NADH-quinone reductase subunit C TERM 1129 1075228 - 1075249 + G 77 -8.7 -4.27796 | overlap 1075229 ATTAGTGATGACTCT GGCAGTCAC GCTG GTGACTGCG TTTTCGAGTTTCTTC TERM 1130 1075229 - 1075248 + G 82 -12.2 -3.15593 | overlap 1075228 TTAGTGATGACTCTG GCAGTCAC GCTG GTGACTGC GTTTTCGAGTTTCTT nqrD 1075091 - 1075720 + | Na(+)-translocating NADH-quinone reductase subunit D TERM 1131 1076086 - 1076102 + G 72 -10.1 -3.05997 | AATCACCGTGAACTG CGCCATC TTT GGTGGCG TGTCGTTTATGGCAC nqrE 1075727 - 1076323 + | Na(+)-translocating NADH-quinone reductase subunit E nqrF 1076339 - 1077562 + | Na(+)-translocating NADH-quinone reductase subunit F TERM 1132 1078263 - 1078245 - g 71 -4.4 -4.66535 | overlap 1078247 AATGGGGAAAATAAA CCTTGGCG TAT CGCCATTG AAAAGCCAGTCGCGG apbE 1077603 - 1078625 + | thiamine biosynthesis lipoprotein YPTB0894 1078638 - 1078865 + | hypothetical protein TERM 1133 1079034 - 1078994 - T 100 -19.1 -3.32844 | opp_overlap 1078995 1078999, overlap 1078995 1078999 TTTTTTATCTGACAA GCAAAGCCCCCGAACGACG CAT CATTGTTCGGGGGCTTTGT TGTTTAATTATTGTC TERM 1134 1079033 - 1078995 - T 100 -22.6 -2.59564 | opp_overlap 1078995 1078999, overlap 1078994 1078999 TTTTTATCTGACAAG CAAAGCCCCCGAACGACG CAT CATTGTTCGGGGGCTTTG TTGTTTAATTATTGT TERM 1135 1078995 - 1079033 + T 100 -22.6 -4.1648 | opp_overlap 1078994 1078995 1078999, overlap 1078999 TTTTTATCTGACAAG CAAAGCCCCCGAACGACG CAT CATTGTTCGGGGGCTTTG TTGTTTAATTATTGT TERM 1136 1079029 - 1078999 - T 100 -17.6 -4.00124 | opp_overlap 1078999 1078995, overlap 1078995 1078994 TATCTGACAAGCAAA GCCCCCGAACGACG CAT CATTGTTCGGGGGC TTTGTTGTTTAATTA TERM 1137 1078999 - 1079029 + T 100 -17.6 -4.62669 | opp_overlap 1078995 1078994 1078999, overlap 1078995 TATCTGACAAGCAAA GCCCCCGAACGACG CAT CATTGTTCGGGGGC TTTGTTGTTTAATTA YPTB0895 1080057 - 1079110 - | hypothetical protein TERM 1138 1079311 - 1079325 + g 74 -4.2 -4.8543 | overlap 1079309 1079313 TGCGCTAGAACGCCC TTCACC CAA GGTGTA TTTTTCTACAACTTC TERM 1139 1080371 - 1080392 + H 71 -6.7 -4.15044 | overlap 1080374 TGAATCCTTTTACTT TAACTGTAT ACTT ATACAGTTG TTTGTTGGGCGGGGG dinP 1080413 - 1081471 + | DNA polymerase IV pepD 1082853 - 1081585 - | aminoacyl-histidine dipeptidase (peptidase D) TERM 1140 1081707 - 1081728 + g 70 -2.2 -5.00616 | overlap 1081701 TTGGCCCAATCGACA CCATGTCC ATGTTA GGATAGGG TTTTTTGAACAAACC TERM 1141 1083728 - 1083742 + H 82 -2.1 -5.65927 | gap 1 AATGAGGTTTTTACT TGAGGC TGTA GCC-CA TTTTTTATTTAAATC TERM 1142 1084195 - 1084209 + H 76 -2.8 -5.26875 | opp_overlap 1084182, overlap 1084182 1084181 1084207 TACCTATTGCTATCT TTAGCT ATA GGCTGA TTTTTTGATTGAAAA TERM 1143 1084609 - 1084619 + H 70 -2.6 -4.9725 | opp_overlap 1084609 CGGAAAAATAAGAAT TAAA TCC TTTA TTTTTGTGTCGGCAT TERM 1144 1085762 - 1085752 - g 77 -4 -5.13016 | opp_overlap 1085752 1085746, overlap 1085746 AATTAAAAGTAAAAA GTAA CGC TTAC TATTTATGTGATAAT YPTB0898 1084920 - 1085831 + | LysR family transcriptional regulator TERM 1145 1086277 - 1086255 - T 100 -13.6 -5.26875 | opp_overlap 1086276 TTCTGAATTAAAAAA CGGGTATTAT AGA ATAATACCCG CTGATAGAGACGATT YPTB0899 1087895 - 1086291 - | putative carbohydrate-binding protein TERM 1146 1087880 - 1087894 + g 81 -5.8 -4.88258 | overlap 1087861 GATGTAGTTGTGCAT TGAAAT GTA ATTTCA TTTTATTATCCTTTT TERM 1147 1087991 - 1088001 + r 74 -4.6 -4.83615 | TGCGCATCCCTCCCG CCCG GAA TGGG TTTTTATAAGCACTA YPTB0900 1088397 - 1088092 - | holin protein TERM 1148 1088274 - 1088284 + g 73 -3.2 -4.89729 | overlap 1088272 ATATTGCTGATATCT TCTC TCG GAGG TTTTTAGATTTTGTA gpt 1088824 - 1089282 + | xanthine-guanine phosphoribosyltransferase TERM 1149 1089294 - 1089323 + F 100 -9.3 -4.69326 | overlap 1089299 ATAATTTACTGTTCT TTAAGCGTCCGGT GCCT GCCGGACGTTTCA TTTTCTCTTCAGTAT TERM 1150 1089299 - 1089318 + F 100 -11.4 -4.32571 | overlap 1089294 TTACTGTTCTTTAAG CGTCCGGT GCCT GCCGGACG TTTCATTTTCTCTTC frsA 1089409 - 1090656 + | fermentation/respiration switch protein crl 1090716 - 1091117 + | DNA-binding transcriptional regulator Crl TERM 1151 1091173 - 1091203 + F 78 -9.1 -3.83205 | CATAAACTGTCCCCA TTACCCCCTTTCT GCACA ATAAAGGGGGTGA TTTCGTATCAAGCCT proB 1091294 - 1092397 + | gamma-glutamyl kinase proA 1092407 - 1093666 + | gamma-glutamyl phosphate reductase TERM 1152 1093753 - 1093739 - f 78 -5.7 -4.7497 | opp_overlap 1093750, overlap 1093750 CTGATTGATTAAAAA TCGCT AGTAA AGCGA CATGTGGCAATTTGC TERM 1153 1093750 - 1093777 + F 100 -13.6 -5.78622 | gap 1, opp_overlap 1093739 1093750 AAAATCGCTAGTAAA GCGACATGTGGCA ATT TGCCA-ATGTCGC TTTTTTTTCAAATCA TERM 1154 1093777 - 1093750 - f 100 -13.6 -3.75863 | gap 1, opp_overlap 1093750, overlap 1093739 AAAATCGCTAGTAAA GCGACATGTGGCA ATT TGCCA-ATGTCGC TTTTTTTTCAAATCA YPTB0906 1093994 - 1094752 + | hypothetical protein YPTB0907 1094935 - 1095204 + | hypothetical protein TERM 1155 1095488 - 1095474 - g 80 -2.8 -5.39721 | GCAGCAGATAAAAAA CTCACT AAT ATTGAG ATACAACAAGGGCTG yafE 1095450 - 1095971 + | putative methyltransferase in menaquinone/biotin biosynthesis YPTB0909 1096433 - 1096218 - | hypothetical protein TERM 1156 1096369 - 1096347 - G 71 -2.7 -4.89009 | AGACTGAATGAAAAA GTGACAACT GATGG ACCTGTCAC GATCATCATTGGCCT TERM 1157 1097004 - 1096980 - g 71 -6.4 -4.21194 | opp_overlap 1096994, overlap 1096996 TTGCACCAGCTAAAA GATCCGCGTT TACAG ATCGCAGATC GTTCTGCGGAGCAGT YPTB0910 1096701 - 1097258 + | putative methyltransferase TERM 1158 1097430 - 1097450 + F 75 -3.2 -5.21709 | opp_overlap 1097421 AGTAAACCTGTTCAA CCGGCC AATAATAAC GGTCGG TTTTTTGATGTCGAA aroL 1097505 - 1098029 + | shikimate kinase II yaiE 1098526 - 1098813 + | hypothetical protein TERM 1159 1098869 - 1098835 - T 74 -10 -3.08133 | opp_overlap 1098828 1098826 1098837 TATTGAGTTAGCGAA TCTGTCACCCTCTCTA TGC CAGAGGGGGCGACATA TCATCTATCCTTTTT TERM 1160 1098837 - 1098867 + T 86 -11.9 -2.91086 | opp_overlap 1098835, overlap 1098828 1098826 TTGAGTTAGCGAATC TGTCACCCTCTCT ATGCC AGAGGGGGCGACA TATCATCTATCCTTT rdgC 1099946 - 1099035 - | recombination associated protein TERM 1161 1099961 - 1099985 + H 84 -11.3 -3.14132 | TAGTGTTATCCTTGG CTCGGGCGCGC CTG GAGCGCGCGAG TTAATCAACGCAGGG TERM 1162 1100212 - 1100230 + H 88 -9.6 -4.25104 | TATCCAGATCACAGT TATCCTGC CTA GCAGGGTA TTTTGATCGCGAGAA yajF 1100279 - 1101193 + | fructokinase sbcC 1105351 - 1101662 - | putative ATP-dependent dsDNA exonuclease TERM 1163 1104125 - 1104154 + g 80 -6.5 -4.81083 | overlap 1104116 1104148 GGCATAGTCTGCTAG CTGTTGCAGGC GTTGATGG GTCTGCAATAG TTTTTGCTCATTCAG sbcD 1106592 - 1105348 - | exonuclease subunit SbcD phoB 1106860 - 1107549 + | two-component regulatory system response regulator TERM 1164 1108810 - 1108820 + G 76 -2.4 -5.29885 | ATGAGTGAAATTGGT CTGG GTA CCCG TTTTATTTTTACCTT phoR 1107574 - 1108890 + | phosphate regulon sensor protein TERM 1165 1109734 - 1109716 - g 79 -11 -3.54307 | AACAGTGGTGTTAAA TCACTGCC GTT GGCAGCGA GTGGGCAAGATTTTG pstS 1108912 - 1109976 + | phosphate ABC transporter periplasmic-binding protein brnQ 1110450 - 1111769 + | LIVCS family branched chain amino acid transporter system II (LIV-II) TERM 1166 1111794 - 1111814 + F 100 -11.1 -4.72272 | overlap 1111808 AATAGAGTATTTTTA GCCACGGTT AAT ATCCGTGGC TTTTTGCTGAAAAAA TERM 1167 1112644 - 1112661 + G 78 -11.3 -3.36492 | opp_overlap 1112637, overlap 1112644 GGAATCAAGTGGGCA CGAACGG TAGT CCGTTCG TTCTGACCTTCCAGC proY 1111845 - 1113236 + | putative proline-specific permease TERM 1168 1113278 - 1113304 + F 100 -6.5 -5.85244 | opp_overlap 1113278 GATAATCGATACAAA GCCGGGGTACA GTTCA TCTGTCCCGGC TTTTTTCTTTTAATT TERM 1169 1114175 - 1114191 + G 77 -2.9 -5.26918 | overlap 1114176 CGATAGCGGGCCTGA TTGGGTC GCG GACCAAG TTTTTTATCAGATCT malZ 1113831 - 1115660 + | maltodextrin glucosidase TERM 1170 1115697 - 1115732 + F 87 -4.7 -5.52986 | opp_overlap 1115711 1115715, overlap 1115715 GATAACTCACTAGAG CAGCTCAGGGATAAC AATTCA GTGATAACTGAGCTG TTTTTTTGCTCCAGT YPTB0923 1115815 - 1116495 + | short chain dehydrogenase TERM 1171 1116564 - 1116535 - T 95 -12.3 -3.35813 | opp_overlap 1116534 1116535 1116537 CTCCACTCTAATGAA TATCCCCCATCAA TAGT TCGATAGGGGATA ATATTTTCAGATACT TERM 1172 1116731 - 1116719 - T 75 -10.5 -2.76468 | overlap 1116716 TAGTAGCCAATAGCA GCCCC TGC GGGGC GACGGACATCATTGG ggt 1118466 - 1116703 - | gamma-glutamyltranspeptidase precursor TERM 1173 1118792 - 1118815 + r 93 -12.5 -3.14132 | opp_overlap 1118792, overlap 1118776 CTAGGGGAAAAAAAA GCCAGTCAG AGTGAA CTGACTGGC TTGATAGCCCCCGAG TERM 1174 1118815 - 1118792 - R 100 -12.5 -5.78622 | opp_overlap 1118792 1118776 CTAGGGGAAAAAAAA GCCAGTCAG AGTGAA CTGACTGGC TTGATAGCCCCCGAG ahpC 1119458 - 1118856 - | putative alkyl hydroperoxide reductase subunit C TERM 1175 1119580 - 1119590 + r 73 -5.4 -4.67641 | GATAGTTTTTGCCTA TCGT TAA ACGA TTTTAGTTTTGCAGT yajB 1120378 - 1119797 - | hypothetical protein queA 1120581 - 1121651 + | S-adenosylmethionine:tRNA ribosyltransferase-isomerase TERM 1176 1121735 - 1121709 - f 81 -7.4 -4.68593 | GTGATCAGGCAAAAA CAACATCAGA CTGTTTC TCTGATGCTG GAGGTTATGTGAAGT TERM 1177 1121776 - 1121797 + G 71 -9.3 -3.57462 | opp_overlap 1121768, overlap 1121790 AAAAACTGATGGGCG CGCCCGCCG TGGT CGGCTGGTG TTTGAGCGTGGCGTG TERM 1178 1122232 - 1122259 + G 88 -12 -3.74872 | gap 1, opp_overlap 1122226 1122225 GATGGAAATGTCACT GCGCTGGGCTGCT CGT AGCCGCC-AGCGC TTTGATGAGCTGAAT tgt 1121744 - 1122868 + | queuine tRNA-ribosyltransferase TERM 1179 1123054 - 1123036 - g 79 -9.6 -3.90112 | opp_overlap 1123035 TCCGGCTCAAGGAAA CAGCATGA CCT CCATGCTG ATCATGCTGGTAGTA yajC 1122980 - 1123315 + | preprotein translocase subunit YajC TERM 1180 1123482 - 1123452 - g 77 -10.5 -3.53091 | gap 1 ATCCGGCTGTTCAAA TCACTGGTGCGCGA GGAA TCGC-CGCCAGTGA GACAACGCTGGTCCA secD 1123343 - 1125190 + | preprotein translocase subunit SecD secF 1125201 - 1126169 + | preprotein translocase subunit SecF TERM 1181 1126229 - 1126201 - f 71 -8.9 -3.24924 | opp_overlap 1126204, overlap 1126199 1126203 1126204 GTTCGATGTATAAGA TAGCCCTGAAACT GTT AGTTTCAGGGTTT TTTTATCAGTAAATT TERM 1182 1126227 - 1126203 - f 84 -11.5 -3.18945 | opp_overlap 1126204, overlap 1126201 1126199 1126204 TCGATGTATAAGATA GCCCTGAAACT GTT AGTTTCAGGGT TTTTTTATCAGTAAA TERM 1183 1126204 - 1126226 + F 100 -15 -5.64274 | opp_overlap 1126204 1126203 1126201 1126199 CGATGTATAAGATAG CCCTGAAACT GTT AGTTTCAGGG TTTTTTTATCAGTAA TERM 1184 1126226 - 1126204 - f 100 -15 -2.51045 | opp_overlap 1126204, overlap 1126203 1126201 1126199 CGATGTATAAGATAG CCCTGAAACT GTT AGTTTCAGGG TTTTTTTATCAGTAA TERM 1185 1126943 - 1126926 - g 71 -6.3 -4.13945 | opp_overlap 1126928, overlap 1126933 AGGCTTACCCGAAAA TAGCGAA GGAA TCCGCTA AGTTGCAGCGATCCC TERM 1186 1127195 - 1127213 + G 79 -11.8 -3.26807 | opp_overlap 1127193, overlap 1127193 CGAACGATAGAGAGT CAGACTGA AAA TCAGTCTG TGGTTTTTAAATCAT TERM 1187 1127606 - 1127592 - g 83 -8.6 -4.54608 | TAAAAGAAACAGAAA CCAGTA AAT TACTGG ATGCGAGCATCAAAG YPTB0932 1126421 - 1127743 + | hypothetical protein ybaD 1127814 - 1128263 + | transcriptional regulator NrdR ribD 1128413 - 1129522 + | bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribH 1129658 - 1130128 + | riboflavin synthase subunit beta TERM 1188 1130239 - 1130223 - g 73 -5.1 -4.57569 | opp_overlap 1130226, overlap 1130226 GCAGTTGTCTAAAAA CGACATC GCT GATGTTG AATTACAGTTCCTGT TERM 1189 1130311 - 1130351 + G 73 -3.3 -4.88918 | opp_overlap 1130326, overlap 1130313 GAATTGCTGTCAGGG GTTGCGGTTAATGCAGC ATCTCTG GATGCATTAATGGCACC TTTTCTTTCCCGTCA nusB 1130149 - 1130565 + | transcription antitermination protein NusB TERM 1190 1130777 - 1130743 - f 100 -21.8 -2.84059 | opp_overlap 1130745 1130749, overlap 1130745 1130749 GATATACATTAACGA TATAAATTAAGGCCGG TAT CCGGCCTTAATTTATA TATCAGTTAACATTT TERM 1191 1130745 - 1130775 + F 100 -20 -2.95091 | opp_overlap 1130743 1130745 1130749, overlap 1130749 TATACATTAACGATA TAAATTAAGGCCGG TAT CCGGCCTTAATTTA TATATCAGTTAACAT TERM 1192 1130775 - 1130745 - f 100 -20 -2.96235 | opp_overlap 1130745 1130749, overlap 1130743 1130749 TATACATTAACGATA TAAATTAAGGCCGG TAT CCGGCCTTAATTTA TATATCAGTTAACAT TERM 1193 1130749 - 1130771 + F 100 -16.4 -4.15061 | opp_overlap 1130745 1130743 1130749, overlap 1130745 CATTAACGATATAAA TTAAGGCCGG TAT CCGGCCTTAA TTTATATATCAGTTA TERM 1194 1130771 - 1130749 - f 100 -16.4 -4.14541 | opp_overlap 1130749 1130745, overlap 1130745 1130743 CATTAACGATATAAA TTAAGGCCGG TAT CCGGCCTTAA TTTATATATCAGTTA thiL 1130806 - 1131795 + | thiamine monophosphate kinase pgpA 1131788 - 1132273 + | phosphatidylglycerophosphatase A TERM 1195 1132312 - 1132341 + T 100 -12.3 -4.13973 | opp_overlap 1132316, overlap 1132316 AGAGAGACTATCACG TAAAGGCATAACC CACG GGCTATGCCTTTA TTGTTTCTGATATCT TERM 1196 1132316 - 1132337 + T 100 -8.7 -4.63952 | opp_overlap 1132316, overlap 1132312 AGACTATCACGTAAA GGCATAACC CACG GGCTATGCC TTTATTGTTTCTGAT TERM 1197 1132337 - 1132316 - T 84 -10.9 -3.6959 | opp_overlap 1132312 1132316 AGACTATCACGTAAA GGCATAACC CACG GGCTATGCC TTTATTGTTTCTGAT dxs 1134273 - 1132414 - | 1-deoxy-D-xylulose-5-phosphate synthase ispA 1135349 - 1134429 - | geranyltranstransferase TERM 1198 1134993 - 1134966 - G 81 -6.2 -4.90471 | gap 1 AGCCAAAATAGAAAA GGCCAGCGTTTGC AGT GCAT-CACCGGCC AAAATAGCGTGGGCC xseB 1135608 - 1135354 - | exodeoxyribonuclease VII small subunit TERM 1199 1135562 - 1135580 + g 73 -8.2 -3.96148 | TCACTGAGTGATGTT TCAAAGCT GGC GGCTTTGA TTTCTGGTGAAGCGG YPTB0942 1135690 - 1135860 + | hypothetical protein thiI 1135958 - 1137409 + | thiamine biosynthesis protein ThiI TERM 1200 1137497 - 1137525 + T 72 -9.5 -3.109 | opp_overlap 1137497, overlap 1137497 CCCGATAATTATAAA TTCCTGGCGGCAA CAC TAGCTGCCAGGCA ATTTCTTCCGCCTTT TERM 1201 1137497 - 1137526 + T 76 -7.9 -4.19974 | gap 1, opp_overlap 1137497, overlap 1137497 CCCGATAATTATAAA TT-CCTGGCGGCAA CAC TAGCTGCCAGGCAA TTTCTTCCGCCTTTT TERM 1202 1137525 - 1137497 - T 73 -7.3 -4.1021 | opp_overlap 1137497 1137497 CCCGATAATTATAAA TTCCTGGCGGCAA CAC TAGCTGCCAGGCA ATTTCTTCCGCCTTT thiJ 1138067 - 1137477 - | hypothetical protein panE 1138941 - 1138030 - | 2-dehydropantoate 2-reductase yajQ 1139173 - 1139664 + | nucleotide-binding protein TERM 1203 1139725 - 1139762 + T 76 -7.7 -4.13014 | opp_overlap 1139729, overlap 1139729 AAACGGTATAACGAC TAAAGGGGCAACGGCTT TTTC ATGTCTTTGCCCCTTAA TTTTGGCCCTATAAA TERM 1204 1139729 - 1139758 + T 73 -8.5 -3.67622 | opp_overlap 1139729, overlap 1139725 GGTATAACGACTAAA GGGGCAACGGCTT TTTC ATGTCTTTGCCCC TTAATTTTGGCCCTA yajR 1141158 - 1139788 - | putative MFS multidrug efflux pump TERM 1205 1141567 - 1141605 + r 100 -11 -4.48299 | opp_overlap 1141571, overlap 1141571 AACAGGGAACAAATA CAAAGTGGCTGGCAAGAG CGA TTCCTGCCAGCCACTTGA TTTATTTCACTCTCA TERM 1206 1141601 - 1141571 - R 100 -17.7 -4.46072 | opp_overlap 1141571 1141567 GGGAACAAATACAAA GTGGCTGGCAAGA GCGAT TCCTGCCAGCCAC TTGATTTATTTCACT TERM 1207 1141571 - 1141601 + r 100 -16.2 -3.76486 | opp_overlap 1141571, overlap 1141567 GGGAACAAATACAAA GTGGCTGGCAAGAG CGA TTCCTGCCAGCCAC TTGATTTATTTCACT cyoE 1142526 - 1141636 - | protoheme IX farnesyltransferase cyoD 1142869 - 1142537 - | cytochrome o ubiquinol oxidase subunit IV cyoC 1143483 - 1142869 - | cytochrome o ubiquinol oxidase subunit III TERM 1208 1143182 - 1143195 + g 71 -6.7 -4.15854 | AAGGTGAAGCCCAAC CAGGT ATTG ACCTG TTTTACACTCCCTTT TERM 1209 1143420 - 1143460 + g 82 -12 -3.17714 | gap 2, overlap 1143426 1143432 ATACTTTCGTCGCTC CCGCATCGTGATGCCCATGC TCT GCATGGGC-T-ACGTTGTGG TTAGTCAGAGTTTCA TERM 1210 1143426 - 1143454 + g 71 -9 -3.54029 | gap 2, overlap 1143420 1143432 TCGTCGCTCCCGCAT CGTGATGCCCATGC TCT GCATGGGC-T-ACG TTGTGGTTAGTCAGA TERM 1211 1143432 - 1143450 + g 90 -14.6 -2.63614 | overlap 1143426 1143420 CTCCCGCATCGTGAT GCCCATGC TCT GCATGGGC TACGTTGTGGTTAGT cyoB 1145464 - 1143473 - | cytochrome o ubiquinol oxidase subunit I cyoA 1146425 - 1145469 - | cytochrome o ubiquinol oxidase subunit II TERM 1212 1145538 - 1145553 + g 74 -2.6 -5.09173 | gap 1, overlap 1145531 1145546 1145550 CATATCCATGCCTTT TGGC-AT GTC ATGGCCA TTTTTTGGCATGTTC TERM 1213 1146553 - 1146568 + r 80 -9 -3.95674 | ACTTTATGTTAAGGG GGTCAC AGAT GTGACC TTATTTGGCAATTTT TERM 1214 1146748 - 1146783 + r 72 -7.1 -4.04295 | opp_overlap 1146746 1146748 1146750, overlap 1146750 AGGTAAATTAAAATA T-ATTTCGAGGTGTCCT AAAT AGG-CACCTCGGAATCA TTTAGTTATAGTTAG TERM 1215 1146750 - 1146780 + r 83 -11.3 -3.05266 | gap 1, opp_overlap 1146750 1146748 1146746, overlap 1146748 GTAAATTAAAATATA TTTCGAGGTGTCCT AAAT AGG-CACCTCGGAA TCATTTAGTTATAGT TERM 1216 1146780 - 1146750 - R 73 -9.1 -3.51998 | gap 1, opp_overlap 1146748 1146750, overlap 1146748 1146746 GTAAATTAAAATATA TTTCGAGGTGTCCT AAAT AGG-CACCTCGGAA TCATTTAGTTATAGT yfeN 1147562 - 1146795 - | hypothetical protein TERM 1217 1147716 - 1147702 - R 85 -2.1 -5.75342 | TTTTTTTAAAAAAAA CATGC AACAA ACATG AAAAGTTGTGATTTA TERM 1218 1147831 - 1147804 - R 86 -3.4 -5.59879 | GATAAACACAAAAAA GCCAGTGC ACAAACTGAACA GCACCGGC TTTATGTCACTTATG ampG 1149332 - 1147854 - | muropeptide transporter TERM 1219 1148204 - 1148186 - G 71 -3 -4.91194 | overlap 1148188 AGAATAAATAGAAAA GTGGCC AGCCATG GGCCTC TACAAACCAACCGGC TERM 1220 1149126 - 1149108 - G 75 -5.9 -4.58395 | overlap 1149088 CCGACGCCCTAAAAA GGACGGC GTGTA GCGGTCC ATCAGCGGGGACCAA TERM 1221 1149345 - 1149373 + r 73 -8.2 -3.65991 | gap 1, opp_overlap 1149343 CATAATAAATCTACC TGCTCTGCCGCAA GGTA TCG-GGCAGAGCA TTCTGTTGAGCAACT yajG 1150027 - 1149449 - | hypothetical protein bolA 1150376 - 1150696 + | transcriptional regulator BolA TERM 1222 1150763 - 1150788 + F 91 -10.5 -4.12532 | opp_overlap 1150769, overlap 1150765 1150769 AGTAGATGAGAATTT TACAAACGGCT CTAG GGCCGTTTGTG TTTCTGTATAGGCGA TERM 1223 1150765 - 1150786 + F 84 -10.9 -3.65996 | opp_overlap 1150769, overlap 1150763 1150769 TAGATGAGAATTTTA CAAACGGCT CTAG GGCCGTTTG TGTTTCTGTATAGGC TERM 1224 1150769 - 1150782 + F 73 -5.9 -4.44187 | opp_overlap 1150769, overlap 1150765 1150763 TGAGAATTTTACAAA CGGCT CTAG GGCCG TTTGTGTTTCTGTAT YPTB0957 1150837 - 1151040 + | hypothetical protein tig 1151113 - 1152417 + | trigger factor TERM 1225 1152435 - 1152457 + F 95 -9.2 -4.4959 | overlap 1152437 TTTTTCAGCGCATGA TGCTGGATGG GAC CCATTCAGTA TTTTGATTGATTAAG TERM 1226 1152437 - 1152455 + F 81 -9.6 -3.85043 | overlap 1152435 TTTCAGCGCATGATG CTGGATGG GAC CCATTCAG TATTTTGATTGATTA TERM 1227 1152472 - 1152497 + F 100 -11.1 -5.50723 | opp_overlap 1152472 ATTTTGATTGATTAA GCCCGTCGCCA TTAT TGGTCACGGGC TTTTTCTTTTGGTAA TERM 1228 1153051 - 1153064 + G 77 -6.7 -4.56597 | opp_overlap 1153051 TGGCTAACCTAATCA CAGCA CAGA TGCTG TTTTTGGAAGCCGAG clpP 1152879 - 1153502 + | ATP-dependent Clp protease proteolytic subunit clpX 1153708 - 1154979 + | ATP-dependent protease ATP-binding subunit TERM 1229 1155031 - 1155013 - f 100 -13.2 -3.44527 | opp_overlap 1155013 CAGTTAGTATGACAA TGGGGGAT TTT ATCCCCCA TTTCTTTTTCCTCGC TERM 1230 1155013 - 1155031 + F 100 -13.2 -4.91852 | opp_overlap 1155013 CAGTTAGTATGACAA TGGGGGAT TTT ATCCCCCA TTTCTTTTTCCTCGC TERM 1231 1155117 - 1155131 + F 72 -10 -2.7752 | opp_overlap 1155107, overlap 1155116 TGAAACTCGTGATGA CTCGTG TTT CACGAG ATTTCCAGTAATCTG TERM 1232 1155626 - 1155616 - g 91 -3.2 -5.83226 | opp_overlap 1155620 AACTGAACAAAAAAA TCCC GCC GGAA GTGCTGGCTTCGCTG TERM 1233 1156428 - 1156410 - g 73 -7.4 -4.20712 | opp_overlap 1156408 1156410, overlap 1156403 CAGAAGATGGCAAAA GTGGGTGT GAA AAACCCAC TCTTCCTATTGGATG lon 1155174 - 1157528 + | DNA-binding ATP-dependent protease La TERM 1234 1157562 - 1157589 + F 72 -6.3 -4.25873 | opp_overlap 1157562 ATTGATAAAACTAAT GCTGGTAAGTG AAATCC TGCTTGCCAGC TATTTTTTGTGCCGC hupB 1157746 - 1158018 + | transcriptional regulator HU subunit beta TERM 1235 1158103 - 1158122 + F 100 -10 -5.86332 | opp_overlap 1158095 1158102 1158103 AAGGTAAGATACAAG GCGCATCG TTTA TGATGCGC TTTTTTTTCGCTTAG TERM 1236 1158122 - 1158103 - f 70 -9.3 -2.81609 | opp_overlap 1158103, overlap 1158095 1158102 AAGGTAAGATACAAG GCGCATC GTTTAT GATGCGC TTTTTTTTCGCTTAG TERM 1237 1159472 - 1159462 - g 73 -4.6 -4.81083 | opp_overlap 1159459 CTTAAGCAGGAAAAA GCGC TTG ACGC TTATTATGCGCTACA ppiD 1158319 - 1160205 + | peptidyl-prolyl cis-trans isomerase (rotamase D) TERM 1238 1160263 - 1160240 - f 100 -15.4 -4.68384 | opp_overlap 1160244, overlap 1160244 ACCGATGTAATAAAA GAAAGGTCGC TTTG GCGACCTTTC GCATATCTGTGATCT TERM 1239 1160259 - 1160244 - f 100 -10.4 -4.88795 | opp_overlap 1160244, overlap 1160240 ATGTAATAAAAGAAA GGTCGC TTTG GCGACC TTTCGCATATCTGTG TERM 1240 1160244 - 1160259 + F 82 -10.4 -3.66139 | opp_overlap 1160244 1160240 ATGTAATAAAAGAAA GGTCGC TTTG GCGACC TTTCGCATATCTGTG TERM 1241 1160482 - 1160467 - g 73 -2.4 -5.07107 | overlap 1160469 1160478 TAAAGTCTCAAAAAA GTCGCC TAAT AGCGCC GCAGATAACGGCGCT YPTB0964 1160345 - 1160791 + | DNA uptake protein ComEA related protein TERM 1242 1160912 - 1160955 + F 83 -8.8 -4.08945 | gap 1, opp_overlap 1160912 1160913 AAGTTGGTAAATCAA GCCGCCAGGC-GGTGCTGGCC ATC GGTAGGTATTGGTCTGGCGGC TTTTACCAACATAAT ybaW 1161145 - 1161552 + | hypothetical protein ybaX 1162336 - 1161638 - | queuosine biosynthesis protein QueC YPTB0967 1164352 - 1162649 - | hypothetical protein TERM 1243 1162842 - 1162860 + g 76 -2.4 -5.19212 | overlap 1162843 GGCGCGCTTTCTATC TGCTGA ATGAAGG TCAGCG TTTTTTGCTGCTGGT cof 1164457 - 1165278 + | putative haloacid dehalogenase-like hydrolase TERM 1244 1165298 - 1165313 + T 100 -6.1 -5.8187 | ATAGCTATTAGCCAG CCGGA GAACCA TCCGG TTTTTTTCTTCCGTA TERM 1245 1165330 - 1165366 + T 100 -10.3 -4.74013 | TTTTTTCTTCCGTAG GCGGTTTGTCAGT GTTCATGCCTA GCTGACAAACCGC TTTTATCTCTTTGAA YPTB0969 1166530 - 1165490 - | putative pyridoxal-phosphate dependent protein TERM 1246 1166177 - 1166166 - G 72 -5.8 -4.43844 | opp_overlap 1166176, overlap 1166168 GCATGATCGACAAAA TGGC AACG GCCA CCGTAGAAGGTGATT ybaO 1166656 - 1167117 + | transcription regulator AsnC TERM 1247 1167831 - 1167812 - g 86 -12.2 -3.61398 | opp_overlap 1167808 TTCTTTGCTTAATAA TCAGGCTC AAGA GAGCCTGA CCAGTATTCGCATGA mdlA 1167219 - 1168985 + | putative multidrug transporter membrane\ATP-binding components TERM 1248 1170567 - 1170552 - g 75 -3.2 -5.0538 | opp_overlap 1170552 1170554, overlap 1170554 GGTGATTCGAAAAAA TACCAC GCTG GTGGTT ATTGCTCATCGCCTT mdlB 1168978 - 1170801 + | putative multidrug transporter membrane\ATP-binding components TERM 1249 1170810 - 1170831 + F 100 -13.7 -4.22554 | GAGTTAAGCAGCACG CGTGGGGTG ATGT CGCCCCACG TTATTTATTGACTCA TERM 1250 1171459 - 1171434 - g 74 -4.1 -5.00138 | gap 1 TACCCAAAGTAAAAA TTGAT-ATCGCC ATC GCCGATGATCAA TTAGACGAAGTGATT glnK 1171253 - 1171591 + | nitrogen regulatory protein P-II 2 amtB 1171625 - 1172920 + | ammonium transporter TERM 1251 1173130 - 1173085 - T 72 -7.5 -4.04089 | opp_overlap 1173090 1173092 1173095 1173097, overlap 1173092 1173095 AAAAATACATAATAA TGATGAACTACAGGGGCGATG GTGA CATCGCCCCTGTGCTATTTCA TTGATTCATCAACTG TERM 1252 1173090 - 1173125 + T 100 -12.6 -4.01419 | opp_overlap 1173085 1173092 1173095, overlap 1173092 1173095 1173097 TACATAATAATGATG AACTACAGGGGCGATG GTGA CATCGCCCCTGTGCTA TTTCATTGATTCATC TERM 1253 1173092 - 1173123 + T 100 -15.2 -3.59031 | opp_overlap 1173092 1173085 1173095, overlap 1173090 1173095 1173097 CATAATAATGATGAA CTACAGGGGCGATG GTGA CATCGCCCCTGTGC TATTTCATTGATTCA TERM 1254 1173122 - 1173092 - T 100 -16.3 -3.34242 | gap 1, opp_overlap 1173090 1173092 1173095 1173097, overlap 1173085 1173095 CATAATAATGATGAA CTACAGGGGCGATG GTGA CATCGCCCCTGT-G CTATTTCATTGATTC TERM 1255 1173095 - 1173120 + T 100 -19.1 -2.906 | opp_overlap 1173095 1173092 1173085, overlap 1173092 1173090 1173097 AATAATGATGAACTA CAGGGGCGATG GTGA CATCGCCCCTG TGCTATTTCATTGAT TERM 1256 1173120 - 1173095 - T 100 -19.1 -2.8293 | opp_overlap 1173092 1173090 1173095 1173097, overlap 1173092 1173085 AATAATGATGAACTA CAGGGGCGATG GTGA CATCGCCCCTG TGCTATTTCATTGAT TERM 1257 1173097 - 1173118 + T 100 -15.9 -2.9955 | opp_overlap 1173095 1173092 1173085, overlap 1173095 1173092 1173090 TAATGATGAACTACA GGGGCGATG GTGA CATCGCCCC TGTGCTATTTCATTG tesB 1174042 - 1173182 - | acyl-CoA thioesterase II TERM 1258 1173878 - 1173894 + g 74 -6.5 -4.41616 | AAATGAGTGAACAGT CCGTTCT GCG GGGACGG TTTGTTTCGCAGCAT ybaY 1174299 - 1174820 + | putative lipoprotein YPTB0977 1175519 - 1174956 - | putative 6-O-methylguanine DNA methyltransferase family protein TERM 1259 1175845 - 1175856 + r 79 -3 -5.27335 | TTGTCGTGAACGCTC TCTA TCAG TAGA TTTTTATTTCCGGCA TERM 1260 1175915 - 1175931 + r 76 -6.6 -4.46652 | AAAATAAGATTCCTC CCATTC TGAAC GAATGG TTTGATTTTTATTTA ymoA 1176454 - 1176251 - | hemolysin expression-modulating protein YPTB0979 1176871 - 1176503 - | hypothetical protein YPTB0980 1177383 - 1177030 - | hypothetical protein TERM 1261 1177197 - 1177207 + g 75 -5.4 -4.8048 | overlap 1177199 1177199 TCATTGAATACTGGT TCTC TTT GAGA TTTTTAATCTCAAGA TERM 1262 1178154 - 1178126 - R 88 -6.7 -5.24551 | gap 1, opp_overlap 1178126 GCAAATGAATAAAAA GGCCCGTTG-GC GTTAGT GCACAAAGGGCC TTTTGGGGACTGATG TERM 1263 1178126 - 1178154 + r 73 -7.4 -4.10161 | gap 1, opp_overlap 1178126 GCAAATGAATAAAAA GGCCCGTTG-GCG TTAG TGCACAAAGGGCC TTTTGGGGACTGATG rpmJ 1178390 - 1178247 - | 50S ribosomal protein L36 rpmE2 1178666 - 1178406 - | 50S ribosomal protein L31 type B TERM 1264 1178804 - 1178819 + r 100 -11.8 -3.83998 | opp_overlap 1178804 GCTCAGCAATAAAAA GGCCGC TTGC GCGGCC TTTAGTATGAAATGA TERM 1265 1178819 - 1178804 - R 100 -11.8 -5.1356 | opp_overlap 1178804 GCTCAGCAATAAAAA GGCCGC TTGC GCGGCC TTTAGTATGAAATGA acrB 1182004 - 1178852 - | acridine/multidrug efflux system protein TERM 1266 1181878 - 1181917 + g 88 -12.3 -3.78775 | TGGCGGCAATTGTAA TTGCCGGTGGCGCAATG GTCGGA TATTGCGCTACTGGTAA TTTCATGATCGCAAG acrA 1183208 - 1182021 - | acridine efflux pump, membrane fusion (MFP/HlyD) family protein TERM 1267 1183179 - 1183197 + g 78 -6 -4.77438 | TACCAGAATTGCAGC CAGAGG CATTACC CCTCTG TTTTTGCTCATAGAT TERM 1268 1183465 - 1183493 + G 76 -9.5 -3.74747 | overlap 1183468 TCTTACCGATATTGC TATCGCTGCGGGT GTA ACCCGAGGCGCTA TTTACTGGCACTTCA TERM 1269 1183468 - 1183490 + G 72 -11.2 -2.66873 | overlap 1183465 TACCGATATTGCTAT CGCTGCGGGT GTA ACCCGAGGCG CTATTTACTGGCACT acrR 1183352 - 1184008 + | DNA-binding transcriptional repressor AcrR ychN 1184021 - 1184374 + | hypothetical protein kefA 1184613 - 1188032 + | potassium efflux protein KefA ybaM 1188561 - 1188406 - | hypothetical protein YPTB0989 1189268 - 1188732 - | putative primosomal replication protein N'' TERM 1270 1189421 - 1189436 + H 76 -7.6 -4.15222 | opp_overlap 1189420 TGGTCGGCACTACAT GCGTTA ATGA TAACGC TTTCTTGACGAAAGT ybaN 1189469 - 1189849 + | hypothetical protein apt 1190088 - 1190651 + | adenine phosphoribosyltransferase TERM 1271 1190801 - 1190815 + F 75 -5.7 -4.58424 | GTTAAGGTATTCCAG CCAGA CAAAC TCTGG TTTTATATCGTCATA TERM 1272 1192679 - 1192638 - g 100 -10 -5.58179 | overlap 1192644 1192677 GACCACAACAAAAAA GAATGAGCCGGCGGCGCC AGGAAA AGCGCGGCCGGCAAACTC AGCACTGGAGCGTTT TERM 1273 1192673 - 1192644 - g 93 -14.2 -3.2756 | overlap 1192638 AACAAAAAAGAATGA GCCGGCGGCGCC AGGAAA AGCGCGGCCGGC AAACTCAGCACTGGA TERM 1274 1192782 - 1192756 - g 76 -7.3 -4.46675 | overlap 1192773 ACGGAAGAGAAGAAA CCAGCGAAAAA AGAAG CTTATCGCTGG ACCGCGAAAAATCAA dnaX 1191307 - 1193283 + | DNA polymerase III subunits gamma and tau TERM 1275 1193412 - 1193400 - g 75 -3.4 -5.17353 | AGATGCAGGAAAAAA TGCA GCAGA TGCA GGAAGAAGTCGCCAA TERM 1276 1193647 - 1193616 - g 73 -3.6 -4.98672 | CGCAAAAAGAGAAAA TGGCCTCTGTATCC AATG GGATGCAATTGCCA CCAGGCTTTAAGATG ybaB 1193339 - 1193671 + | hypothetical protein recR 1193671 - 1194276 + | recombination protein RecR TERM 1277 1194666 - 1194697 + G 74 -9.6 -3.57792 | opp_overlap 1194664, overlap 1194656 GATGGCGAACTGAGA GTGCGTTTATCTTT TGAT AAAGAGAAACGTAC TTTAACCCTGAGTGA htpG 1194468 - 1196342 + | heat shock protein 90 TERM 1278 1196355 - 1196383 + F 91 -6.8 -5.56673 | gap 1, opp_overlap 1196355 TAATCGATAAAAAAA CACCCTTGTTCAA CGTA TTGC-CAAGGGTG TTTTTTATTGTACCT TERM 1279 1196383 - 1196355 - f 100 -6.8 -5.66684 | gap 1, opp_overlap 1196355 TAATCGATAAAAAAA CACCCTTGTTCAA CGTA TTGC-CAAGGGTG TTTTTTATTGTACCT adk 1196569 - 1197213 + | adenylate kinase TERM 1280 1197229 - 1197259 + F 100 -17 -3.59979 | opp_overlap 1197236, overlap 1197222 1197221 TTCTGGATGGCCTTA TAGCTAAGGCGGTT TAA GGCCGCCTTAGCTA TTTCAAGTAAGAAGG hemH 1197303 - 1198265 + | ferrochelatase TERM 1281 1198783 - 1198795 + F 80 -2.7 -5.53288 | CTTTTTTGTTTCTAT TTTAG TCA CTGAA TTTTTTTGACTTAAG TERM 1282 1199427 - 1199441 + G 86 -7.8 -4.90266 | opp_overlap 1199427 CTTTTACGAATTGAA GGTCCT CAA GGGACC TTTTTCGTTCGTGAA ddhD 1198863 - 1199852 + | CDP-6-deoxy-delta-3,4-glucoseen reductase TERM 1283 1199868 - 1199853 - f 72 -6.2 -4.25256 | GTGCCATCAAAATAA CTTTGA GAGA TCAAAG TAATACGTAATGGAG ddhA 1199878 - 1200663 + | glucose-1-phosphate cytidylyltransferase ddhB 1200668 - 1201741 + | CDP-glucose 4,6-dehydratase ddhC 1201759 - 1203072 + | putative CDP-4-keto-6-deoxy-D-glucose-3-dehydratase TERM 1284 1203083 - 1203098 + F 100 -9 -6.02914 | opp_overlap 1203083 1203082 1203085 TTTAACAGGAGCAAG GAGGCA ACAC TGCCTC TTTTTTTTATATGAA prt 1203109 - 1203966 + | paratose synthase wbyH 1203967 - 1205250 + | hypothetical protein TERM 1285 1206520 - 1206558 + G 75 -7.7 -4.23758 | opp_overlap 1206556 ATCGCTATTTTCTGG TGGATTGATAATACTTT CATCT ATAATATTATCAATCCA TTTTAAATATGGCGT wzx 1205339 - 1206682 + | putative O-unit flippase YPTB1005 1206693 - 1207676 + | hypothetical protein TERM 1286 1208843 - 1208831 - g 100 -4.9 -5.95286 | AGTAAAAATAAAAAA TATAG AAG CTATA AAATTAAAAATCCCC TERM 1287 1208928 - 1208938 + G 82 -5.4 -5.09762 | TATATTACTGATGAT GAAC CTG GTTC TTTTTATATTACGAT wbyJ 1207848 - 1208990 + | putative mannosyltransferase TERM 1288 1209352 - 1209370 + G 75 -6 -4.63863 | opp_overlap 1209356, overlap 1209356 TCCCATATTTTCTAT TACAGCAC CCA GTGCTATA TTCTTTTTCTATTAC TERM 1289 1209865 - 1209877 + G 80 -6.3 -4.67755 | CGCACTGAATAATTC TGCAA TGC TTGCA TTTTTCCCTGACTAT YPTB1007 1208987 - 1210207 + | O-unit polymerase-like protein wbyK 1210456 - 1211469 + | putative mannosyltransferase gmd 1211485 - 1212606 + | GDP-D-mannose dehydratase fcl 1212612 - 1213577 + | GDP-fucose synthetase manC 1213743 - 1215149 + | mannose-1-phosphate guanylyltransferase TERM 1290 1215485 - 1215470 - g 71 -4.7 -4.60924 | opp_overlap 1215470 GAAACCTTTGAAAAA CAGCA ATGTGA TGCTG TATATGGTGACTTAC TERM 1291 1215582 - 1215603 + G 74 -4.4 -4.96848 | overlap 1215585 AAAAAATGAAGTATG GTTGGATG CCTCCC CATCCTAC TTTTTATATGAAACG wbyL 1215152 - 1215895 + | glycosyltransferase manB 1215900 - 1217273 + | phosphomannomutase wzz 1217321 - 1218472 + | ferric enterobactin transport protein FepE TERM 1292 1218490 - 1218526 + F 76 -6.6 -4.46155 | gap 1, opp_overlap 1218494, overlap 1218494 TTTAAACGAATTTAT C-TAACGGCTGGGTGAG GTTT CTCATCTGGCCGTTCTG TTTTATCGCTCTGTA TERM 1293 1218494 - 1218521 + F 100 -12 -4.03183 | opp_overlap 1218494, overlap 1218490 AACGAATTTATCTAA CGGCTGGGTGAG GTTT CTCATCTGGCCG TTCTGTTTTATCGCT TERM 1294 1219532 - 1219543 + G 71 -7.2 -4.03413 | overlap 1219525 TGTTATGTACCGCAG GCCC CAGC GGGC TTTATATGGCGGGAT gsk 1218676 - 1219980 + | inosine-guanosine kinase TERM 1295 1220000 - 1220034 + T 100 -13.6 -5.06816 | opp_overlap 1220002 1220003, overlap 1220003 GTAGACGCGGGATAT AAGTCAGGGCCAGCAT AGT AAGCTGGCCCTGATTG TTTTTATTACAGAGT TERM 1296 1220032 - 1220002 - T 100 -14 -3.49102 | opp_overlap 1220000 1220003, overlap 1220003 AGACGCGGGATATAA GTCAGGGCCAGCAT AGT AAGCTGGCCCTGAT TGTTTTTATTACAGA TERM 1297 1220031 - 1220003 - T 100 -17.5 -2.6914 | opp_overlap 1220003 1220000, overlap 1220002 GACGCGGGATATAAG TCAGGGCCAGCAT AGT AAGCTGGCCCTGA TTGTTTTTATTACAG TERM 1298 1220003 - 1220031 + T 100 -17.5 -4.63592 | opp_overlap 1220002 1220003, overlap 1220000 GACGCGGGATATAAG TCAGGGCCAGCAT AGT AAGCTGGCCCTGA TTGTTTTTATTACAG rosB 1221768 - 1220077 - | putative cation:proton antiport protein TERM 1299 1220736 - 1220725 - G 83 -7.2 -4.68908 | opp_overlap 1220724 CCCAGCCAAAATAAA GGCG AACT CGCC GATTTGTGCCAAACT rosA 1223217 - 1222003 - | MFS cationic anti peptides (CAMPs) efflux/K+ antiporter, rosA subunit TERM 1300 1222425 - 1222410 - G 71 -2.6 -5.00196 | CCGCAAATAAGAAAA CAAATA GGTG TATCTG GGCACTTTGTACCGA YPTB1019 1225496 - 1225257 - | hypothetical protein TERM 1301 1225662 - 1225688 + r 72 -10.1 -2.88849 | gap 1, opp_overlap 1225651, overlap 1225657 1225663 ACATCCATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCTCTGCC TERM 1302 1225663 - 1225689 + r 84 -10.1 -3.82218 | gap 1, opp_overlap 1225651, overlap 1225657 1225662 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCTCTGCCT TERM 1303 1225752 - 1225766 + r 73 -7.2 -4.10437 | overlap 1225740 TTGTCAGCAGTCTGA TGAGTT TTA AACTCA TTCTTTCCTTCATAG YPTB1020 1226312 - 1225833 - | hypothetical protein TERM 1304 1226549 - 1226570 + r 100 -10.9 -5.87996 | AAATTCCTCTTTGAC TGGCCGGTA GTGA TATCGGCCA TTTTTTTATTGATTG YPTB1021 1227385 - 1226576 - | hypothetical protein TERM 1305 1227768 - 1227729 - R 100 -17.4 -3.2614 | gap 1, opp_overlap 1227721, overlap 1227730 CATTTTGGATATCAA CGCTCAATGGCGCACAAAA CGA TATTGTGCGCCATTGAG-G TCACTGAAAGCATTT TERM 1306 1227768 - 1227730 - R 100 -17.6 -2.5547 | opp_overlap 1227721, overlap 1227729 ATTTTGGATATCAAC GCTCAATGGCGCACAAAA CGA TATTGTGCGCCATTGAGG TCACTGAAAGCATTT ATCU 1230667 - 1227782 - | copper exporting ATPase TERM 1307 1228889 - 1228865 - G 79 -10.7 -3.45118 | overlap 1228867 GCAGGCGATAATTAA CACCGTGGTGG CCA CCACCAGGGTA TAGACCAACTGGGGT TERM 1308 1228887 - 1228867 - G 78 -11.1 -3.29593 | overlap 1228865 AGGCGATAATTAACA CCGTGGTGG CCA CCACCAGGG TATAGACCAACTGGG TERM 1309 1229510 - 1229546 + g 71 -4.9 -4.59773 | overlap 1229511 1229512 CCAGGCCGCACCTGT CCCCAGAGCGACCAAGG TAT CCATGGTCGCACTGCCA TTTTTCAGGCTGACC TERM 1310 1229512 - 1229544 + g 75 -11.9 -2.61004 | overlap 1229511 1229510 AGGCCGCACCTGTCC CCAGAGCGACCAAGG TAT CCATGGTCGCACTGC CATTTTTCAGGCTGA TERM 1311 1230161 - 1230176 + g 71 -6.8 -4.15222 | opp_overlap 1230171, overlap 1230162 ATCAGAAACCGTACT TGTGGC TAAA GCCACG TTTGTTGCCGGAACT TERM 1312 1230914 - 1230902 - g 87 -5.5 -5.40474 | ATGTTGCGAAAAAAA CCGGT TTA ACCAG CAAAGCCATTCGTTT TERM 1313 1230961 - 1230946 - g 100 -4.6 -6.13503 | opp_overlap 1230948, overlap 1230948 TATGAAGAAAAAAAA CTGGTG ACGC CACCTG TTCGCACGGATAACG TERM 1314 1231012 - 1231043 + G 100 -13.8 -4.14739 | gap 1, opp_overlap 1231011 1231009 AAACATATTGAAGAG CTCACGTTGCTGCGC CAG GCGCGGCAA-GTGGG TTTTACACTGGATGA cueR 1230874 - 1231293 + | merR family copper regulatory protein cueR TERM 1315 1231397 - 1231442 + T 100 -14.9 -3.80114 | opp_overlap 1231404, overlap 1231398 1231434 TTAACGCTGCCGTGA TGAATAACCCGAATCACCTAC CAGA GTAAGTGATTCGGGCTGTTCG TTTACTGCCTTGCTG TERM 1316 1231398 - 1231441 + T 100 -16.2 -2.87586 | opp_overlap 1231404, overlap 1231397 1231434 TAACGCTGCCGTGAT GAATAACCCGAATCACCTAC CAGA GTAAGTGATTCGGGCTGTTC GTTTACTGCCTTGCT TERM 1317 1231435 - 1231404 - T 100 -18.2 -3.71848 | opp_overlap 1231398 1231397 1231434 TGCCGTGATGAATAA CCCGAATCACCTAC CAGA GTAAGTGATTCGGG CTGTTCGTTTACTGC YPTB1024 1231941 - 1231492 - | hypothetical protein YPTB1025 1232858 - 1231944 - | hypothetical protein TERM 1318 1233002 - 1232980 - R 100 -13.4 -4.52703 | overlap 1232969 GAAAGCAGCATAAAA CTGCGCAGGA TTG CCCCGCGCAG TAGCAAATGATGGTA YPTB1026 1233922 - 1233053 - | putative thioredoxin TERM 1319 1233737 - 1233707 - G 73 -7.7 -4.07647 | gap 2 AGAGCGTAAACCAAA TTGCGACGC-C-ACC ATG GGTTGTGCATCGCAA TCGACACGGGCCAGA YPTB1027 1234775 - 1233999 - | short chain dehydrogenase TERM 1320 1235068 - 1235097 + rH 86 -5.7 -5.26316 | gap 1, opp_overlap 1235068, overlap 1235075 1235076 TGATTGGTAAGCGAA GGGATTACCGCACT TTT AGTGCGCTT-TCCC TTTTTTCTAGCCTGA TERM 1321 1235076 - 1235090 + rH 73 -10 -3.03344 | opp_overlap 1235068, overlap 1235075 1235068 AAGCGAAGGGATTAC CGCACT TTT AGTGCG CTTTCCCTTTTTTCT tesA 1235800 - 1235162 - | multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1 TERM 1322 1235590 - 1235629 + gH 76 -2.1 -5.26316 | overlap 1235600 1235616 TATCTCCACTGATAC TGGCATTGAC-CACCTTCG GTAA CGAAGGCGTGGCT-TGCCA TTTTTTATCCAATAG ybbA 1235768 - 1236454 + | putative ABC transporter ATP-binding protein YbbA TERM 1323 1236673 - 1236696 + G 73 -10.2 -3.24422 | opp_overlap 1236666, overlap 1236672 1236671 GAAGCGAAGCAGCAG GGGCTGGCGG TTAG CCGCCAACTC TCATTTTTGACCATG TERM 1324 1237018 - 1237001 - g 78 -7.7 -4.38712 | gap 1 CTGATGTTGAGAAAA CCGG-TGC GGT GCAACCGG GTAGCCGTTTGACTT YPTB1030 1236451 - 1238880 + | putative permease TERM 1325 1238893 - 1238917 + T 86 -9.9 -4.04491 | overlap 1238906 TAGTGGATTTTATTC GCGGGCAGC AGCAGAG GCCGCCCGC TTCTTGTTATAACTT purK 1239988 - 1238924 - | phosphoribosylaminoimidazole carboxylase ATPase subunit purE 1240509 - 1239985 - | phosphoribosylaminoimidazole carboxylase catalytic subunit YPTB1033 1241547 - 1240825 - | UDP-2,3-diacylglucosamine hydrolase TERM 1326 1241502 - 1241486 - G 90 -9.4 -4.5538 | opp_overlap 1241486, overlap 1241479 ATAAAATGCAGAAAA CCGGCA GTGAT TGCCGG TTCCTGAACGCTGAG TERM 1327 1241486 - 1241502 + g 73 -10.1 -3.14931 | opp_overlap 1241486 1241479 ATAAAATGCAGAAAA CCGGCAG TGA TTGCCGG TTCCTGAACGCTGAG ppiB 1242052 - 1241558 - | peptidyl-prolyl cis-trans isomerase B (rotamase B) TERM 1328 1243201 - 1243215 + G 73 -7.8 -4.03413 | TCTGAAGCAGGCACG CGCTTC ACT GGAGCG TTTATATACCGCGCT TERM 1329 1243236 - 1243224 - g 71 -10.5 -2.87931 | TGGAGCGTTTATATA CCGCG CTG CGCGG TACTGATGCTAACGC cysS 1242263 - 1243648 + | cysteinyl-tRNA synthetase TERM 1330 1243814 - 1243844 + T 100 -11.3 -5.8187 | gap 1, opp_overlap 1243814 1243816, overlap 1243816 ATAGTACTAAAAAAA TTGCGGTT-CTGGT GTTT ACCAGTAACCGCGA TTTTTTTGTTCAATA TERM 1331 1243844 - 1243814 - T 100 -9.1 -5.56568 | gap 1, opp_overlap 1243814 1243816, overlap 1243816 ATAGTACTAAAAAAA TTGCGGTT-CTGGT GTTT ACCAGTAACCGCGA TTTTTTTGTTCAATA TERM 1332 1243816 - 1243842 + T 83 -11.7 -3.0287 | gap 1, opp_overlap 1243814 1243816, overlap 1243814 AGTACTAAAAAAATT GCGGTT-CTGGT GTTT ACCAGTAACCGC GATTTTTTTGTTCAA TERM 1333 1243842 - 1243816 - T 83 -11.7 -2.94304 | gap 1, opp_overlap 1243816 1243814, overlap 1243814 AGTACTAAAAAAATT GCGGTT-CTGGT GTTT ACCAGTAACCGC GATTTTTTTGTTCAA TERM 1334 1243861 - 1243875 + T 83 -11.4 -3.02263 | opp_overlap 1243860 TTTTTTGTTCAATAG GCCAGC AAT GCTGGC TATTACAACGGCTAT YPTB1036 1244102 - 1243890 - | hypothetical protein folD 1244983 - 1244117 - | bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase TERM 1335 1245333 - 1245303 - R 79 -8.3 -4.09864 | opp_overlap 1245310, overlap 1245310 AGTTACCGCTTAAAA TACAAAACCCGCC ATTTA GACGGGTCATGTA ACGGGTCAGGTAGTG TERM 1336 1245326 - 1245310 - R 85 -7.2 -4.89567 | opp_overlap 1245310, overlap 1245303 GCTTAAAATACAAAA CCCGCC ATTTA GACGGG TCATGTAACGGGTCA YPTB1038 1245533 - 1245351 - | hypothetical protein YPTB1039 1245992 - 1245792 - | hypothetical protein YPTB1040 1246753 - 1246106 - | hypothetical protein TERM 1337 1246675 - 1246716 + g 100 -16.1 -2.91702 | opp_overlap 1246680, overlap 1246680 ATTCAGGGAGCCATA AAAAATGGCCGGAAGCTAA ATCA TTAACTTCCGGCCATTTTA ATATTTTATCGTGTT TERM 1338 1246680 - 1246711 + g 100 -16 -4.58236 | opp_overlap 1246680, overlap 1246675 GGGAGCCATAAAAAA TGGCCGGAAGCTAA ATCA TTAACTTCCGGCCA TTTTAATATTTTATC TERM 1339 1246711 - 1246680 - G 100 -18.2 -5.28176 | opp_overlap 1246680 1246675 GGGAGCCATAAAAAA TGGCCGGAAGCTAA ATCA TTAACTTCCGGCCA TTTTAATATTTTATC YPTB1041 1247076 - 1246738 - | hypothetical protein YPTB1043 1247610 - 1247855 + | hypothetical protein YPTB1044 1248255 - 1248857 + | putative CDP-alcohol phosphatidyltransferase YPTB1045 1248850 - 1249779 + | putative phosphatidate cytidylyltransferase YPTB1046 1249789 - 1250421 + | putative acyltransferase TERM 1340 1250462 - 1250480 + G 76 -9.6 -3.64716 | opp_overlap 1250452, overlap 1250460 1250465 AGGCATGTTCACCGC CAGCGATG AAA CATCGTTG TATTTTCGCCACTGG TERM 1341 1250465 - 1250477 + G 70 -7.7 -3.95435 | opp_overlap 1250452, overlap 1250462 1250460 CATGTTCACCGCCAG CGATG AAA CATCG TTGTATTTTCGCCAC YPTB1047 1250418 - 1252181 + | hypothetical protein YPTB1048 1252174 - 1253493 + | putative dual specificity phosphatase TERM 1342 1253549 - 1253569 + G 80 -7.5 -4.58236 | TTTCGCCTTATTAAC GCTACCACC GCT GGTGCTGGC TTTTAATCTTTTGTA YPTB1049 1253505 - 1253876 + | hypothetical protein YPTB1050 1253973 - 1254278 + | hypothetical protein TERM 1343 1254460 - 1254477 + F 86 -7.7 -4.61231 | gap 1, opp_overlap 1254459 1254460, overlap 1254461 GCTGAAATCGAATAC CGGG-AGC AGG GCTTCCCG TTTTTGGGGGTCTAA YPTB1051 1254581 - 1255474 + | LysR family transcriptional regulator TERM 1344 1255500 - 1255475 - T 100 -13.4 -3.15544 | opp_overlap 1255470 1255469 CGTTATTCGGATTAA CTGGCTTACG GATTAT CGTAAGCCAG ATGAAATTTGAGCGA YPTB1052 1256518 - 1255529 - | putative aldo/keto reductase TERM 1345 1255683 - 1255705 + g 78 -6.2 -4.82901 | opp_overlap 1255704 TGCAGTTTTGTGGTT CCGGGGATTG GCA CAATCCAAGG TTTTTGTGCCAACAA YPTB1053 1257395 - 1256544 - | putative aldo/keto reductase YPTB1054 1257868 - 1259496 + | hypothetical protein bglB 1261956 - 1259575 - | putative beta-glucosidase TERM 1346 1262080 - 1262093 + r 82 -2.3 -5.72254 | overlap 1262071 TAACGGGTCGGCATG GGGCC AGAC GGTTC TTTTTTATTGTTTAA YPTB1056 1262642 - 1262112 - | hypothetical protein TERM 1347 1262398 - 1262420 + g 89 -6.2 -5.34365 | opp_overlap 1262398 1262399, overlap 1262392 1262399 TTGGACTCAGGACAA GGCAGTGAAG GCT CTTCTCTGCA TTTTTCTTGTTCTGC TERM 1348 1262399 - 1262419 + g 76 -9.7 -3.78992 | opp_overlap 1262399 1262398, overlap 1262398 1262392 TGGACTCAGGACAAG GCAGTGAAG GCT CTTCTCTGC ATTTTTCTTGTTCTG YPTB1057 1264842 - 1262635 - | hypothetical protein TERM 1349 1264268 - 1264257 - G 80 -3 -5.36441 | TGTTGAGATAAAAAA TGTT GTCG AACA GTGAGAAAGAGACCG TERM 1350 1264698 - 1264685 - G 71 -4.5 -4.57482 | overlap 1264681 CTACTGAGAAACAAA CGCCA AGCC TGACG TCCGGGCCGGACACC TERM 1351 1264881 - 1264927 + H 77 -10.8 -2.74926 | opp_overlap 1264883 1264884 1264919, overlap 1264878 1264876 GCGAAAGGGATATCA AATGCCGTCTTGTTGCCGATAG GCT CTGACGGCGACAAGATGGCGAG TCATCTCTGGTTTCT TERM 1352 1264925 - 1264883 - H 78 -9 -3.87354 | opp_overlap 1264881 1264878 1264876, overlap 1264884 1264919 GAAAGGGATATCAAA TGCCGTCTTGTTGCCGATAG GCT CTGACGGCGACAAGATGGCG AGTCATCTCTGGTTT TERM 1353 1264924 - 1264884 - H 93 -12.5 -2.91689 | opp_overlap 1264881 1264878 1264876, overlap 1264883 1264919 AAAGGGATATCAAAT GCCGTCTTGTTGCCGATAG GCT CTGACGGCGACAAGATGGC GAGTCATCTCTGGTT TERM 1354 1265306 - 1265322 + G 73 -2.3 -5.07486 | CGATGGCGATCGCTA CATTG AACAGGG CAATG TTTTTATTAACGGTA TERM 1355 1266038 - 1266024 - g 80 -4.2 -5.252 | overlap 1266035 CAGGGGCAGAAAAAA GCCGAA AAA TCCGAC GACAACACCGCTTCC YPTB1058 1265226 - 1266098 + | 23S rRNA pseudouridine synthase F YPTB1059 1266316 - 1267437 + | hypothetical protein TERM 1356 1268286 - 1268298 + T 95 -3.4 -6.28631 | TTGTGGAAATTATCT TGCT GACTG AGCA TTTTTTTTTAATTTA TERM 1357 1268360 - 1268339 - T 91 -6.5 -5.56264 | opp_overlap 1268344, overlap 1268342 GTGAAATAGAAAAAA TAACCCCTC AGAA GAGGGGCTG AGGTTATTGACAAAG TERM 1358 1268357 - 1268342 - T 100 -10.4 -4.8277 | opp_overlap 1268344, overlap 1268339 AAATAGAAAAAATAA CCCCTC AGAA GAGGGG CTGAGGTTATTGACA TERM 1359 1268436 - 1268462 + T 72 -10.1 -2.88849 | gap 1, opp_overlap 1268425, overlap 1268431 1268437 ACATCCATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCTCTGCC TERM 1360 1268437 - 1268463 + T 84 -10.1 -3.82218 | gap 1, opp_overlap 1268425, overlap 1268431 1268436 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCTCTGCCT YPTB1061 1270468 - 1268552 - | pertactin family virulence factor/autotransporter TERM 1361 1269916 - 1269939 + g 83 -11.8 -3.53012 | gap 1, opp_overlap 1269898 1269915 1269933 GAAGCGGCACGATAC TCGTGCCCTTC CAG GAAGGGC-CGA TTTCGACCAGACCCG TERM 1362 1270551 - 1270529 - H 78 -9.8 -3.54926 | opp_overlap 1270533, overlap 1270527 CATTGTAAAAAGAGA CACACCGCCC TTG GGACGGTTTG AACGTTATGTTTATC YPTB1062 1271277 - 1271516 + | hypothetical protein YPTB1063 1271555 - 1271806 + | hypothetical protein YPTB1064 1271830 - 1272309 + | hypothetical protein TERM 1363 1272314 - 1272349 + T 72 -7.9 -3.76767 | gap 2, opp_overlap 1272323, overlap 1272312 1272317 GGGTTTACTAGTTTC TGATATCAAGCACACTT TTTC AAGTGTGCTTGA-A-CA TATTTATATTCTTCA TERM 1364 1272342 - 1272323 - T 81 -10.8 -3.25942 | opp_overlap 1272317 1272314 1272312 AGTTTCTGATATCAA GCACACTT TTTC AAGTGTGC TTGAACATATTTATA YPTB1065 1272815 - 1272414 - | hypothetical protein TERM 1365 1273307 - 1273285 - R 71 -4.8 -4.58859 | AAATAGAACAATAAA GGGACTGCAA ATA TTACAAACCC AACCTTCCATGAAAA YPTB1066 1274298 - 1273441 - | hypothetical protein TERM 1366 1274060 - 1274046 - G 100 -5.7 -5.76949 | GACTGCCAAAAAAAA CCGAT GTGGG ATCGG TACAGGAAAAAATAG TERM 1367 1274509 - 1274497 - H 78 -4.1 -5.24551 | overlap 1274487 TTAAATGAAGAAAAA CTTCA TTA CGAAG AAGATGACCAGAGCT TERM 1368 1274522 - 1274546 + H 73 -5.7 -4.44355 | opp_overlap 1274522, overlap 1274524 AAGAAGATGACCAGA GCTGAATGGGT ATG AGCCATTCAAC TTATTTTTAGAATTA sfsB 1274971 - 1275216 + | putative DNA-binding protein TERM 1369 1275257 - 1275283 + T 95 -8.1 -5.16237 | gap 2, overlap 1275279 AAACGCGAGATTGCT GCCCCACAATGGT GTG ACC-T-GTGGGGC TTTTTTGATCCCCTT ponC 1277792 - 1275429 - | putative bifunctional penicillin-binding protein 1C TERM 1370 1276104 - 1276083 - G 73 -7.2 -4.15114 | AATATTAAAGAATAA CGGTGCGG CGGCAT CGGCACCG ACAAAGGCGCTGTTG TERM 1371 1277811 - 1277841 + r 83 -9 -4.23434 | gap 1, overlap 1277815 1277816 GTTACGGCTGAAATC CGATAGCGCCCCG GCGATG CGGGGCGC-GTTG TTTTCAGCTATTTTG TERM 1372 1277815 - 1277838 + r 93 -10.9 -4.2142 | overlap 1277811 1277816 CGGCTGAAATCCGAT AGCGCCCCG GCGATG CGGGGCGCG TTGTTTTCAGCTATT TERM 1373 1277816 - 1277837 + r 100 -14.4 -3.11767 | overlap 1277815 1277811 GGCTGAAATCCGATA GCGCCCCG GCGATG CGGGGCGC GTTGTTTTCAGCTAT YPTB1069 1283818 - 1277849 - | hypothetical protein TERM 1374 1281063 - 1281079 + g 85 -12.3 -3.37056 | opp_overlap 1281062 GATTTCAGATCCAAT GGGATGG TCG CCATCCC TTGTAGATCGGTCGT TERM 1375 1281743 - 1281760 + g 73 -5.5 -4.56597 | opp_overlap 1281746, overlap 1281742 GGCTCGGGTGGGCAG GAAGGAG ACAT CCCCTTC TTTTTCCACCAGGAA TERM 1376 1282579 - 1282597 + g 81 -11 -3.61894 | CGGCCTCATTGAGGG TCAGCGCC AGC GGCGTTGA TTGTTGCAGCAGATT TERM 1377 1284172 - 1284194 + r 77 -10.6 -3.14344 | GCTATGGCAGAGTCA TGCCCTGAGA GCG TTTCAGGGCG TTGGTACAGCAGATG YPTB1070 1285334 - 1284480 - | hypothetical protein YPTB1071 1285676 - 1287202 + | putative methylmalonate-semialdehyde dehydrogenase TERM 1378 1288058 - 1288076 + G 72 -11 -2.5655 | overlap 1288057 GCTGCCAAGTGATCA TCCCCTCA ACT TGGGGGGA ATTGGTGTCACTGGC TERM 1379 1288314 - 1288338 + G 81 -12.9 -2.70932 | overlap 1288316 GAAGGGCTGGCAGGT TATCGCACTGC TTG GCAGGGCGATA TCATTGAGGCCAAAG TERM 1380 1288316 - 1288336 + G 74 -11.1 -2.90075 | overlap 1288314 AGGGCTGGCAGGTTA TCGCACTGC TTG GCAGGGCGA TATCATTGAGGCCAA YPTB1072 1287216 - 1289162 + | putative thiamine pyrophosphate-dependent protein YPTB1073 1289456 - 1290442 + | putative myo-inositol 2-dehydrogenase TERM 1381 1290791 - 1290806 + G 73 -3.2 -4.84311 | gap 1, opp_overlap 1290784, overlap 1290791 TGGAAAATGCCATCA CCC-GTG GCG CGCAGGG TTTTATTGTCTCGCC YPTB1074 1290568 - 1291497 + | putative ABC type sugar-binding periplasmic protein YPTB1075 1291546 - 1293093 + | sugar ABC transporter ATP-binding subunits TERM 1382 1293184 - 1293195 + G 73 -2.2 -5.1244 | overlap 1293177 CTTTTTTTGAACGCT TCGG CGTC CTGA TTTTTATGTTCCTGC YPTB1076 1293105 - 1294133 + | ABC type sugar transport system permease protein YPTB1077 1294157 - 1295290 + | hypothetical protein TERM 1383 1295681 - 1295668 - g 75 -3.7 -5.05601 | GACCACAGATAAAAA GCGGC TCAC GGCGC TGGTACTCCTGAGTA YPTB1078 1295339 - 1297309 + | putative carbohydrate kinase TERM 1384 1298230 - 1298219 - g 72 -5.8 -4.31329 | TCAAAAACCGTAAAA CCAG TTTT CTGG ACGCGGTGTTGAGTG YPTB1079 1297516 - 1298436 + | hypothetical protein TERM 1385 1298576 - 1298600 + G 70 -9.9 -3.1944 | opp_overlap 1298559, overlap 1298569 AAGGGCAGCCACTGA CGCTCACCGCG GTT CCCGATGAGCG TTGCCTGGTTTTGAT YPTB1080 1298446 - 1299261 + | hypothetical protein TERM 1386 1299250 - 1299281 + T 86 -9 -4.27694 | opp_overlap 1299249 1299243, overlap 1299233 1299231 1299247 ATAAATCATAATTAT CCTATTACATAA ATTGTTTA TTATGTAATAGG TTGTTTATTAATTAG TERM 1387 1299334 - 1299345 + T 75 -3 -5.24551 | opp_overlap 1299334 TTTATTGTGAATAAC CAAA TCGC TTTG TTTTTATTCGTTTGA YPTB1081 1299766 - 1299464 - | hypothetical protein TERM 1388 1300183 - 1300205 + G 72 -10.6 -2.94695 | overlap 1300185 1300187 GTTTGCGGTTTCACC TAGAGCGCCA GAC TGGCGGTCTA TCATTATCTATTGAG YPTB1082 1299831 - 1301621 + | ABC transporter YPTB1083 1301924 - 1301637 - | hypothetical protein YPTB1084 1302758 - 1302579 - | hypothetical protein YPTB1085 1303905 - 1302940 - | hypothetical protein TERM 1389 1304437 - 1304413 - g 90 -2.9 -5.78622 | overlap 1304415 CTATCGTAAAAAAAA TCTTCACATCC TTA GGATTTAAAAA AGAGATTAAATTCTA TERM 1390 1304537 - 1304558 + G 85 -5.7 -5.05505 | opp_overlap 1304527 1304537, overlap 1304542 CAAACGTCTGGATAA GACCCCCGC AGAA GCGGATGTC TTTTTGATTTGTGAT YPTB1086 1304328 - 1304945 + | LuxR family regulatory protein YPTB1087 1305716 - 1305225 - | hypothetical protein cspE 1305983 - 1306192 + | cold shock protein CspE TERM 1391 1306213 - 1306230 + T 100 -10.5 -5.28176 | opp_overlap 1306213 CCATATCTTTAAAAA CCCGCCT TACT GGGCGGG TTTTTTATGGGTAGC TERM 1392 1306230 - 1306213 - T 100 -9.8 -4.61231 | opp_overlap 1306213 CCATATCTTTAAAAA CCCGCC TTACTG GGCGGG TTTTTTATGGGTAGC ccrB 1306998 - 1306615 - | camphor resistance protein CrcB tatE 1307565 - 1307822 + | twin argininte translocase protein A TERM 1393 1307931 - 1307911 - T 100 -11.9 -5.93809 | opp_overlap 1307911 GGCTGATAAAAAAAA CGGATCTCC AAT GGAAATCCG TTTTTTGGTGGCTGC TERM 1394 1307911 - 1307931 + T 100 -9.7 -5.1675 | opp_overlap 1307911 GGCTGATAAAAAAAA CGGATCTCC AAT GGAAATCCG TTTTTTGGTGGCTGC TERM 1395 1307969 - 1307987 + T 74 -9.6 -3.38046 | opp_overlap 1307969, overlap 1307967 1307970 1307974 AGGTGTAATAAGTTA TTTCAGCC ATG GGCTGAAG TCTTTAGCCTACCGC TERM 1396 1307970 - 1307986 + T 76 -10.9 -2.62613 | opp_overlap 1307969, overlap 1307969 1307967 1307974 GGTGTAATAAGTTAT TTCAGCC ATG GGCTGAA GTCTTTAGCCTACCG lipA 1308968 - 1308003 - | lipoyl synthase TERM 1397 1308995 - 1309007 + r 80 -6.3 -4.90013 | TTCCAGTTCTGAATC TCTCA ACT TGAGA TTTTTCATTAAATTC lipB 1309850 - 1309161 - | lipoyltransferase TERM 1398 1310008 - 1309979 - R 86 -7.9 -4.62085 | gap 2, opp_overlap 1309978, overlap 1309976 ACCCCGAAAAAATAA GGCCCGGCACCTG AATAAA CAGG-GC-GGGCC GTCATTAGCGCGTTG YPTB1093 1310337 - 1310074 - | hypothetical protein TERM 1399 1310431 - 1310402 - R 72 -6.3 -4.3739 | opp_overlap 1310403, overlap 1310408 TATCCGGCTATAAAA TCACAACTCCCGC CGGA GCGGGAGTGACGT ACTGTTCGCCAGATA TERM 1400 1310425 - 1310408 - R 100 -12.7 -3.72405 | opp_overlap 1310403, overlap 1310402 GCTATAAAATCACAA CTCCCGC CGGA GCGGGAG TGACGTACTGTTCGC dacA 1311737 - 1310535 - | D-alanyl-D-alanine carboxypeptidase fraction A TERM 1401 1312059 - 1312096 + r 100 -14.3 -5.14163 | opp_overlap 1312053 1312056 1312070 TCACCCAAACAGTTT TAACCGTAACACCCTGT TTGC ACAGGCGGTTACGGTTA TTTTTATTAGTCAGT rlpA 1313222 - 1312140 - | rare lipoprotein A rodA 1314344 - 1313232 - | cell wall shape-determining protein TERM 1402 1313844 - 1313834 - G 71 -8.2 -3.76767 | overlap 1313832 1313835 GGAACAACACAAACA GGCC GGA GGCC GCAACCAGAATTGAT pbpA 1316425 - 1314530 - | penicillin-binding protein 2 TERM 1403 1314727 - 1314704 - G 74 -8.9 -3.78022 | CTCATAGGGAGCAAA CGCAACCAT TAACTT ATGGTCGCG CAGGTGTTCTGCCAC TERM 1404 1315074 - 1315100 + g 70 -2.2 -4.86033 | overlap 1315076 1315086 TGGCCAATACCTACC GGAATGGTATCA CCC TGATACCAAGGC TTTTTATGGCGCTTT TERM 1405 1316046 - 1316059 + g 81 -8.1 -4.62471 | GAGGTAAAGCGACGT GAGCG TTTG CGCTC TTTTTCAAAGTTAGC YPTB1098 1316977 - 1316507 - | SPOUT methyltransferase superfamily protein YPTB1099 1317298 - 1316981 - | hypothetical protein nadD 1318183 - 1317521 - | nicotinic acid mononucleotide adenylyltransferase holA 1319207 - 1318173 - | DNA polymerase III subunit delta TERM 1406 1319179 - 1319152 - G 78 -9 -3.98649 | opp_overlap 1319149, overlap 1319153 CACAATAGATAACAA GCGCGTAGCCCC TCAT GGAGCTGCGCGA CAAGTTGTTCAGGGT TERM 1407 1319178 - 1319153 - G 81 -12.5 -2.98105 | opp_overlap 1319149, overlap 1319152 ACAATAGATAACAAG CGCGTAGCCCC TCAT GGAGCTGCGCG ACAAGTTGTTCAGGG rlpB 1319827 - 1319204 - | LPS-assembly lipoprotein RplB TERM 1408 1319800 - 1319766 - G 74 -6.3 -4.34402 | CCCCGCAGATTAAAA CCGCAGCCAGCGGTG ACCAG CACCGCCAACCCCAG CAACAACGTCAGAAT leuS 1322424 - 1319842 - | leucyl-tRNA synthetase TERM 1409 1320499 - 1320516 + g 73 -3.4 -4.85599 | opp_overlap 1320498 CATCATAAACAGACG TACGGT ATCCGC GCCGTA TTTTTCTACCATGAC YPTB1104 1322686 - 1323168 + | hypothetical protein TERM 1410 1323297 - 1323266 - T 87 -5 -5.49579 | overlap 1323267 1323270 TCATAAAAAATAAAA GTGACCTCCCCTAC AAAC GCAGGGGAGGAGAA CGAATTAATGCAAGA TERM 1411 1323296 - 1323267 - T 75 -8.5 -3.87307 | overlap 1323266 1323270 CATAAAAAATAAAAG TGACCTCCCCTAC AAAC GCAGGGGAGGAGA ACGAATTAATGCAAG TERM 1412 1323293 - 1323270 - T 100 -14.6 -2.95933 | overlap 1323267 1323266 AAAAAATAAAAGTGA CCTCCCCTAC AAAC GCAGGGGAGG AGAACGAATTAATGC gltL 1324027 - 1323302 - | ABC glutamate/aspartate transporter, ATP binding subunit gltL gltK 1324701 - 1324027 - | ABC glutamate/aspartate transporter, permease subunit gltK gltJ 1325441 - 1324701 - | ABC glutamate/aspartate transporter, permease subunit gltJ TERM 1413 1325550 - 1325524 - R 100 -15.2 -5.60993 | opp_overlap 1325521 1325524 GGGTTGACAAAAAAA TGCGGGGTGG GGAACGA CCACCCCGCA TCCTGTCTACCAATA TERM 1414 1325524 - 1325550 + r 100 -15.2 -2.69468 | opp_overlap 1325524, overlap 1325521 GGGTTGACAAAAAAA TGCGGGGTGG GGAACGA CCACCCCGCA TCCTGTCTACCAATA TERM 1415 1325584 - 1325602 + r 77 -10.2 -3.07102 | overlap 1325581 CATCATCAATCGGTA GGGCAGGT ATG ACCCGCCC TGATTATTATTGTTA ybeJ 1326532 - 1325615 - | glutamate and aspartate transporter subunit TERM 1416 1326076 - 1326098 + g 91 -11.4 -4.2131 | opp_overlap 1326075 1326076, overlap 1326089 CTTTACCTGCCAAAT CTTTGAAGTC TTT GACTTCAGAG TCTTTTTTGGTGAGT TERM 1417 1326089 - 1326100 + g 77 -4.4 -5.1675 | opp_overlap 1326076 1326075, overlap 1326076 ATCTTTGAAGTCTTT GACT TCAG AGTC TTTTTTGGTGAGTAA TERM 1418 1326394 - 1326410 + g 75 -5.1 -4.7416 | opp_overlap 1326397 ATTCACGGTGGCCCA CAACGAT AAC ACCGTTG TTTTTAACCTTTTGC TERM 1419 1327024 - 1327004 - R 79 -11.2 -3.11178 | GAACTAAGCGGAATA TAGCCCTG GAGTG CAGGGCTA TCAGGTACAAATAGA TERM 1420 1327078 - 1327066 - R 74 -4.1 -4.97666 | AACAGATGAGAAAAA CAGAC GTT ATCTG TGACTGGAAGCACTA lnt 1328828 - 1327281 - | apolipoprotein N-acyltransferase TERM 1421 1328793 - 1328775 - G 85 -5.9 -5.17353 | overlap 1328777 1328778 ACAGGCACCAAAAAA TAGCGCC AGTAG GGCGCGA ACCCACTGGCGTTGG TERM 1422 1328791 - 1328777 - G 77 -8.5 -4.2131 | overlap 1328775 1328778 AGGCACCAAAAAATA GCGCC AGTAG GGCGC GAACCCACTGGCGTT TERM 1423 1328804 - 1328778 - G 79 -11.6 -3.11701 | overlap 1328777 1328775 GGCACCAAAAAATAG CGCCAGTAGG GCGCGAA CCCACTGGCG TTGGAGGAATAGAGC CorC 1329714 - 1328836 - | magnesium/cobalt efflux protein CorC TERM 1424 1329564 - 1329574 + g 73 -5.4 -4.64676 | overlap 1329561 CTCGGGTATCGGGAT CGAT CAG ATCG TTTTGTTCAGAATCA YPTB1111 1330305 - 1329832 - | putative metalloprotease YPTB1112 1331414 - 1330302 - | hypothetical protein TERM 1425 1331628 - 1331605 - R 86 -6.7 -5.07652 | opp_overlap 1331607, overlap 1331607 CCCGCTAAAATAAAA CAGGCACTG ACAATG CAGTGCCTC GTTACGCGGGCGGGA TERM 1426 1331626 - 1331607 - R 85 -9.3 -4.16397 | opp_overlap 1331607, overlap 1331605 CGCTAAAATAAAACA GGCACTG ACAATG CAGTGCC TCGTTACGCGGGCGG miaB 1333126 - 1331702 - | putative tRNA-thiotransferase TERM 1427 1333338 - 1333323 - H 70 -5.4 -4.52589 | opp_overlap 1333311, overlap 1333324 TGCGGTTAGACAAAA CCTTGC TAAT GCAAGA AGTACATTCACTTTT ubiF 1333368 - 1334549 + | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase TERM 1428 1334726 - 1334750 + T 100 -16.5 -2.73364 | overlap 1334724 TACTGCCTTTCTGCC TGAGCCCGGTA TTC TGCCGGGCTCA TCATTCCGCTGACGG TERM 1429 1334950 - 1334935 - T 100 -8.2 -5.1971 | opp_overlap 1334935 1334930 ATGAAAAAGCAAAAA GCCCGC CGAA GCGAGC TTTTCTAAATTTGGC TERM 1430 1334935 - 1334950 + T 73 -6 -4.51196 | opp_overlap 1334935, overlap 1334930 ATGAAAAAGCAAAAA GCCCGC CGAA GCGAGC TTTTCTAAATTTGGC TERM 1431 1335162 - 1335200 + T 79 -11.7 -2.53911 | opp_overlap 1335165 TGTATGGCTGGGATA CCAGGATTCGAACCTGG GAATG CCAGGATCAAAACCTGG TGCCTTACCGCTTGG TERM 1432 1335320 - 1335358 + T 79 -11.7 -2.53911 | opp_overlap 1335310 1335323 AAGATGGCTGGGATA CCAGGATTCGAACCTGG GAATG CCAGGATCAAAACCTGG TGCCTTACCGCTTGG TERM 1433 1335831 - 1335855 + T 79 -11.4 -2.50385 | opp_overlap 1335831, overlap 1335830 1335826 1335834 GGTGACGTAAAAAAA CAAGGCCGCC CCAGA GGCGACCTTG CTATCTATTCTCTAT TERM 1434 1335855 - 1335831 - T 100 -14.3 -5.47218 | opp_overlap 1335831 1335830 1335826 1335834 GGTGACGTAAAAAAA CAAGGCCGCCC CAG AGGCGACCTTG CTATCTATTCTCTAT TERM 1435 1336008 - 1336025 + T 78 -9.8 -3.53189 | TTGTCAGCAGTCGGC GCGGGG GATTAA CCCCGC TTATCGTGTTCAATT asnB 1337703 - 1336039 - | asparagine synthetase B nagD 1338810 - 1338058 - | UMP phosphatase TERM 1436 1338867 - 1338852 - R 73 -9 -3.42346 | opp_overlap 1338849 AATAGGTCACTATAA CATGGC TGTG GCCATG ACAGTTTCTTTCAAC nagC 1340109 - 1338883 - | putative N-acetylglucosamine regulatory protein nagA 1341271 - 1340126 - | N-acetylglucosamine-6-phosphate deacetylase TERM 1437 1340899 - 1340909 + g 79 -2.4 -5.42862 | GGTGCAAGCCGAGCG CCTG ATG CTGG TTTTTTTGCAGATAT nagB 1342091 - 1341291 - | glucosamine-6-phosphate deaminase TERM 1438 1342407 - 1342417 + H 74 -6.8 -4.37886 | GTGTTTATATAATGT GTGC CAT GCAC TTTTCTAAAAGGTAG nagE 1342490 - 1344523 + | pts system, N-acetylglucosamine-specific IIABC component TERM 1439 1344637 - 1344614 - f 100 -15.4 -3.4052 | opp_overlap 1344614 TTTTAATCGAACCAA CGGGAAGAGA GCGA TCTCTTCCCG TTTTTTTGTTTTGTT TERM 1440 1344614 - 1344637 + F 100 -15.4 -6.17669 | opp_overlap 1344614 TTTTAATCGAACCAA CGGGAAGAGA GCGA TCTCTTCCCG TTTTTTTGTTTTGTT glnS 1344738 - 1346405 + | glutaminyl-tRNA synthetase TERM 1441 1346428 - 1346447 + F 100 -10.7 -5.4251 | opp_overlap 1346426 CGCTCAGATTCAATT GGCGTGG CACAGT CCACGCC TTTTTTGTCTCTGAC TERM 1442 1347487 - 1347469 - g 71 -7.4 -4.11623 | CAGCACCAAATGAAA TTGGCTTC AGT GACGCCAA AACCCGCTGGGACGA YPTB1122 1347111 - 1348532 + | outermembrane porin TERM 1443 1351046 - 1351076 + G 72 -10.4 -3.05844 | overlap 1351044 GAAGAGTGATAAACC CTGGCCGGGTGTAC AGG GTATCTCCGGTCAG TCTTGGAATGAAACG YPTB1123 1348860 - 1351535 + | beta-N-acetylhexosaminidase TERM 1444 1351646 - 1351664 + T 100 -11.7 -5.40072 | TGAGTTGATCGTATT TCCCCGG CTGGT CCGGGGA TTTTTTTGCCCGAAA fur 1352422 - 1351976 - | ferric uptake regulator TERM 1445 1352774 - 1352738 - R 71 -9.6 -3.06492 | opp_overlap 1352738 1352742, overlap 1352742 CCAGTGACTGGAACA GAAACGCTCTGC TGTGAATACTATC GCAGAGCGTTTC TTGTTGCGGGGAGAT TERM 1446 1352738 - 1352774 + r 100 -12.4 -3.61517 | opp_overlap 1352738 1352742, overlap 1352742 CCAGTGACTGGAACA GAAACGCTCTGCTGTG AATAC TATCGCAGAGCGTTTC TTGTTGCGGGGAGAT TERM 1447 1352742 - 1352770 + r 78 -7.4 -4.44667 | opp_overlap 1352738 1352742, overlap 1352738 TGACTGGAACAGAAA CGCTCTGCTGTG AATAC TATCGCAGAGCG TTTCTTGTTGCGGGG fldA 1353316 - 1352789 - | flavodoxin FldA YPTB1126 1353637 - 1353389 - | hypothetical protein TERM 1448 1353741 - 1353698 - R 73 -6 -4.41206 | opp_overlap 1353705 1353736, overlap 1353705 AATGACGGCATAAAA GTAATAACAGCGTGGCGTAA TCAC TTACACCACGCTGTTGTGGT AACCGACAGGGTTAG TERM 1449 1353705 - 1353734 + r 100 -15.1 -3.40403 | opp_overlap 1353698 1353705 GCATAAAAGTAATAA CAGCGTGGCGTAA TCAC TTACACCACGCTG TTGTGGTAACCGACA TERM 1450 1353734 - 1353705 - R 100 -17.3 -3.9978 | opp_overlap 1353705, overlap 1353698 GCATAAAAGTAATAA CAGCGTGGCGTAA TCAC TTACACCACGCTG TTGTGGTAACCGACA YPTB1127 1354040 - 1353753 - | LexA regulated protein YPTB1128 1355139 - 1354372 - | hypothetical protein TERM 1451 1355404 - 1355392 - R 87 -4.9 -5.4492 | opp_overlap 1355390 1355392, overlap 1355402 GATAGATATAAAAAA TGATT AAT AATCA TCTTGTTGATGAAGA TERM 1452 1356121 - 1356134 + r 78 -9.5 -3.737 | opp_overlap 1356119 1356116 TCTTGATTAACTATT GGGGC GAAC GCCCC TTTCGTAGAAGGTTG trp1400A 1356795 - 1356532 - | IS1400 transposase TERM 1453 1357105 - 1357123 + H 100 -13.2 -4.01078 | CCAGGGGGTAATCTG CTCTCCTG ATT CAGGAGAG TTTATGGTCACTTTT TERM 1454 1357176 - 1357161 - g 71 -4.6 -4.56914 | overlap 1357162 TTATGGAAATTAAAA TCCTGC ACAA GCAGGG AATGAGTAGCCGGGC YPTB1132 1357127 - 1358149 + | putative transposase TERM 1455 1358230 - 1358216 - g 82 -11.4 -3.3506 | overlap 1358207 TGGAAAGCCTTATAA GCGCAG CGC CTGCGC TGTCACAACAGGCAG YPTB1133 1358149 - 1358928 + | transposase/IS protein TERM 1456 1359455 - 1359481 + T 88 -9.3 -4.3534 | opp_overlap 1359455 TACAGACACAAAAAA GCCCGCAAACC TAGGT GGGATGCGGGC TTTTCGTACTTCACC TERM 1457 1359481 - 1359455 - T 100 -9.3 -5.4492 | opp_overlap 1359455 TACAGACACAAAAAA GCCCGCAAACC TAGGT GGGATGCGGGC TTTTCGTACTTCACC smpB 1360422 - 1359940 - | SsrA-binding protein YPTB1136 1360583 - 1361017 + | hypothetical protein YPTB1137 1361010 - 1361294 + | hypothetical protein TERM 1458 1361313 - 1361291 - T 78 -4.1 -5.1101 | opp_overlap 1361292, overlap 1361292 1361295 TGAGCAGGCAAAAAA GTAAGGCAC AATCA GCGCCTTAT TTTTTGTTGTCACTC TERM 1459 1361292 - 1361312 + T 87 -5.4 -5.56673 | opp_overlap 1361291 1361292 1361295 GAGCAGGCAAAAAAG TAAGGCAC AATCA GCGCCTTA TTTTTTGTTGTCACT TERM 1460 1361312 - 1361292 - T 70 -7.6 -3.65883 | opp_overlap 1361292, overlap 1361291 1361295 GAGCAGGCAAAAAAG TAAGGCAC AATCA GCGCCTTA TTTTTTGTTGTCACT YPTB1138 1361794 - 1361444 - | hypothetical protein TERM 1461 1361513 - 1361529 + g 74 -3 -5.14563 | ATCAAAGGTCAACGT TAACGT TTGTT GCGTTA TTTTTTCGTGACCAG RecN 1363578 - 1361899 - | recombination and repair protein ppnK 1364528 - 1363647 - | inorganic polyphosphate/ATP-NAD kinase GrpE 1364652 - 1365230 + | heat shock protein GrpE TERM 1462 1365265 - 1365249 - T 85 -9.4 -4.19238 | GCTCTAACGTTAAAA GGCACC TCAAC GGTGCC TCAAATTGCTAACAA TERM 1463 1365277 - 1365308 + T 79 -10.9 -3.09823 | opp_overlap 1365282, overlap 1365271 1365282 TGCCTCAAATTGCTA ACAAAGTCCTGGC CTCCTA GCCGGGACTTTGC TCTAATTTTACGCGG TERM 1464 1365303 - 1365282 - T 76 -7.9 -4.19371 | opp_overlap 1365282 1365277 1365271 CAAATTGCTAACAAA GTCCTGGCC TCCT AGCCGGGAC TTTGCTCTAATTTTA TERM 1465 1365282 - 1365303 + T 83 -9.4 -3.92694 | opp_overlap 1365282, overlap 1365277 1365271 CAAATTGCTAACAAA GTCCTGGC CTCCTA GCCGGGAC TTTGCTCTAATTTTA gltA 1366618 - 1365338 - | type II citrate synthase TERM 1466 1366434 - 1366452 + g 70 -2.5 -4.8622 | gap 1 AGCAAAATACCCTGA TCACC-AT CAAT ATAGGTGA TTTTTGATTCGCAGG sdhC 1367328 - 1367717 + | succinate dehydrogenase cytochrome b556 large membrane subunit sdhD 1367711 - 1368058 + | succinate dehydrogenase cytochrome b556 small membrane subunit TERM 1467 1368780 - 1368811 + G 79 -11.6 -3.18264 | gap 1, opp_overlap 1368765 1368772, overlap 1368782 TGGAAATGTGGCAGT TCCACCCG-ACCGGT ATT GCCGGTGCGGGTGTA TTAGTGACTGAAGGC TERM 1468 1368782 - 1368809 + G 90 -14.2 -3.1552 | gap 1, opp_overlap 1368765 1368772, overlap 1368780 GAAATGTGGCAGTTC CACCCG-ACCGGT ATT GCCGGTGCGGGTG TATTAGTGACTGAAG sdhA 1368059 - 1369825 + | succinate dehydrogenase flavoprotein subunit sdhB 1369875 - 1370591 + | succinate dehydrogenase iron-sulfur subunit TERM 1469 1370730 - 1370751 + F 86 -12.3 -2.53263 | opp_overlap 1370730 ATGTGAGTTTATTAA CCCGGAGAG GGGA TTCTCCGGG TAGCTTCACGGTAGG TERM 1470 1370751 - 1370730 - f 84 -11.6 -3.16683 | opp_overlap 1370730 ATGTGAGTTTATTAA CCCGGAGA GGGGAT TCTCCGGG TAGCTTCACGGTAGG TERM 1471 1370854 - 1370840 - f 70 -7.1 -3.75378 | AGGTCCATAACAGAA CGTGC ATTGA GCACG TCGAGTGAACCGTTT TERM 1472 1371006 - 1371033 + G 80 -6.4 -4.68994 | gap 1, opp_overlap 1371006, overlap 1371009 GGCGGGCGCGAACCA GTCCTACATAGAG CAG CTCTATGAA-GAC TTTTTAACTGATCCT TERM 1473 1371506 - 1371490 - g 82 -5.1 -5.12971 | opp_overlap 1371488 1371490, overlap 1371491 AACACCGAAGAAAAA CGCTG GATTCAG CAGCG TATTGAATCGGTTGT TERM 1474 1372626 - 1372609 - g 76 -8.3 -4.08919 | AAAGTTGAAATGAAA CGCCTGC AAGA GCTGGCG CGTCGGATCAGCTCT kgd 1370947 - 1373754 + | alpha-ketoglutarate decarboxylase sucB 1373784 - 1375007 + | dihydrolipoamide acetyltransferase TERM 1475 1375092 - 1375079 - f 70 -9.5 -2.81045 | overlap 1375076 TTATCCAGAACACTA CGGGC TTCG GCCCG TCTCAGACCTTATAT TERM 1476 1375374 - 1375360 - g 73 -2.1 -5.08824 | overlap 1375361 TGGCTAGGTAAAAAA CTGGT CACTT ACCAA ACAGATGCCAACGGA sucC 1375120 - 1376286 + | succinyl-CoA synthetase subunit beta sucD 1376286 - 1377158 + | succinyl-CoA synthetase subunit alpha TERM 1477 1377205 - 1377222 + F 100 -12.7 -5.252 | opp_overlap 1377203 CTAACGCGACATACT GGCCACC TTTT GGTGGCC TTTTTTATACAAATG TERM 1478 1377460 - 1377444 - f 70 -3.7 -4.7889 | overlap 1377452 ATAAATATGTAAAAA TCAAAAC TGT GATTTGA CTCACTCTGAATTTA TERM 1479 1377664 - 1377685 + F 70 -8.1 -3.62046 | opp_overlap 1377663 1377664 CATATAGGCTTAAAT TGTCGTAGA TCAA TTTACGACA TTGTTACCAAAATGC TERM 1480 1377970 - 1377986 + G 78 -5.1 -4.87786 | ACAGTTTGCCTTAAC GGCAATG TAC CATTTCC TTTTTGTCCCATTAA cydA 1377926 - 1379494 + | cytochrome D ubiquinol oxidase subunit I TERM 1481 1379653 - 1379634 - g 80 -7.2 -4.60487 | opp_overlap 1379634 TATCATCGGTAAAAA TGATACAG AGCG CCGTATCA TGATTAACTCGATTG cydB 1379509 - 1380648 + | cytochrome D ubiquinol oxidase subunit II YPTB1153 1380661 - 1380795 + | hypothetical protein TERM 1482 1380820 - 1380836 + G 81 -10.8 -3.69323 | opp_overlap 1380820 CGAATTAATGGATAA GGGCCC ATTGA GGGCCC TTTCACTGGTGCTCG TERM 1483 1380836 - 1380820 - g 79 -10.8 -3.45134 | opp_overlap 1380820 CGAATTAATGGATAA GGGCCC ATTGA GGGCCC TTTCACTGGTGCTCG YPTB1154 1380785 - 1381072 + | hypothetical protein TERM 1484 1381092 - 1381119 + F 76 -7 -4.57218 | opp_overlap 1381090, overlap 1381095 1381096 CCTTGAGCACAATCC TACCTATGGGCC ATCC GGCCCATAATTA TTTTCGTTCTATTCT TERM 1485 1381095 - 1381116 + F 86 -8.7 -4.36586 | opp_overlap 1381090, overlap 1381092 1381096 TGAGCACAATCCTAC CTATGGGCC ATCC GGCCCATAA TTATTTTCGTTCTAT TERM 1486 1381096 - 1381115 + F 86 -12.2 -3.20325 | opp_overlap 1381090, overlap 1381095 1381092 GAGCACAATCCTACC TATGGGCC ATCC GGCCCATA ATTATTTTCGTTCTA YPTB1155 1381204 - 1381605 + | acyl-CoA thioester hydrolase YbgC tolQ 1381605 - 1382291 + | colicin uptake protein TolQ tolR 1382304 - 1382732 + | colicin uptake protein TolR TERM 1487 1383260 - 1383247 - g 74 -3.1 -5.11254 | AACAACAAAAACAAA TCGCT GAAC AGCAA AAGCAGGCCGCTGAA TERM 1488 1383445 - 1383426 - g 75 -3.4 -5.15969 | overlap 1383429 GCTGAAGCCAAAAAA GAAGCTGC TGTT GCCGCTGC GGCGAAGAAACAAGC TERM 1489 1383562 - 1383552 - g 79 -2.4 -5.38047 | GATGCAGAGAAAAAA GCCG CTG CTGC TAAAAAAGTTGCTGC TERM 1490 1383622 - 1383600 - g 100 -9 -5.46657 | opp_overlap 1383619 1383621, overlap 1383572 1383602 GAGGCCAAGAAAAAA GCGGCAGCAG AAG CGGCTGCCTC AACGGATGTTGATGA TERM 1491 1383620 - 1383602 - g 71 -10.2 -2.91061 | opp_overlap 1383619, overlap 1383572 1383600 GGCCAAGAAAAAAGC GGCAGCAG AAG CGGCTGCC TCAACGGATGTTGAT TERM 1492 1383692 - 1383668 - g 75 -5.1 -4.70879 | gap 1 GGCAAACGCTAAAAA TGCA-CCGAA GAGTGG TTCGGGTGCA GGTGCCGCTGCTGCC tolA 1382844 - 1384010 + | cell envelope integrity inner membrane protein TolA tolB 1384130 - 1385422 + | translocation protein TolB pal 1385473 - 1385979 + | peptidoglycan-associated outer membrane lipoprotein YPTB1161 1385989 - 1386798 + | hypothetical protein TERM 1493 1386808 - 1386842 + F 100 -14.4 -4.0162 | CTTTAGCTTTTTTGA GCCCAGGATTTAGTCA ATT TGACTGATTTCTGGGC TTTATCGTGTGAAGA TERM 1494 1387493 - 1387478 - f 73 -9 -3.5399 | overlap 1387481 AGCAGAGCGAGACAA CAACGC GCCA GCGTTG ACCCGAAGGGCGAGT TERM 1495 1387660 - 1387645 - f 73 -9 -3.5399 | overlap 1387648 AGCAGAGCGAGACAA CAACGC GCCA GCGTTG ACCCGAAGGGCGAGT TERM 1496 1387827 - 1387812 - f 73 -9 -3.5399 | overlap 1387815 AGCAGAGCGAGACAA CAACGC GCCA GCGTTG ACCCGAAGGGCGAGT TERM 1497 1388062 - 1388072 + F 70 -5.4 -4.54026 | opp_overlap 1388047, overlap 1388047 1388046 TTTGGCGACTTTTTG CCAA ATA TTGG TTATTTTGTTTAGGA TERM 1498 1388953 - 1388969 + G 77 -4.4 -5.02074 | gap 1 GAAAACGTTAATTGT TGCCACC GATC GG-GGCA TTTTTTACAAGATGC nadA 1388174 - 1389235 + | quinolinate synthetase pnuC 1389357 - 1390082 + | intergral membrane NMN transport protein PnuC YPTB1164 1391135 - 1390197 - | zinc transporter ZitB TERM 1499 1390897 - 1390878 - G 71 -6.4 -4.15044 | gap 1 CGCTGCGTTAACAAA GGCCG-CGA GTG TCGTCAGCC GTAGGTAGCCAAAAG TERM 1500 1392025 - 1392003 - g 71 -9 -3.51411 | opp_overlap 1392012 1392013, overlap 1391999 ACTCGTCGAAATTAA CGACAGCGGG TTA CCGGCCGCCG GTGAGTTTTTGGATA TERM 1501 1392012 - 1392030 + G 75 -5.2 -4.72333 | opp_overlap 1392003 1391999, overlap 1392013 AATTAACGACAGCGG GTTACCGG CCG CCGGTGAG TTTTTGGATATGATT TERM 1502 1392178 - 1392162 - g 83 -8.7 -4.56597 | CGTTGGTTTTAAAAA TGGTACC GAC GGCACCA TTAAAGTGGCTATTG TERM 1503 1392210 - 1392224 + G 72 -5.7 -4.33417 | opp_overlap 1392204 TGCGATCAACGCGGC CAGTG CCCCA CACTG TTTCTTGTCGGTGAC aroG 1391602 - 1392654 + | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 1504 1392808 - 1392785 - T 95 -7.5 -5.4505 | gap 1, opp_overlap 1392785 GCCGTCAATAAAAAA CCCCG-ACAT TATTC ATGTACGGGG TTTTTTTACTGTGTT TERM 1505 1392785 - 1392808 + T 100 -7.5 -5.62219 | gap 1, opp_overlap 1392785 GCCGTCAATAAAAAA CCCCG-ACAT TATTC ATGTACGGGG TTTTTTTACTGTGTT gpmA 1393588 - 1392836 - | phosphoglyceromutase psiF 1394270 - 1393935 - | putative starvation-inducible protein galM 1395633 - 1394563 - | aldose 1-epimerase galK 1396778 - 1395627 - | galactokinase galT 1397827 - 1396775 - | galactose-1-phosphate uridylyltransferase galE 1398853 - 1397837 - | UDP-galactose-4-epimerase TERM 1506 1398000 - 1398019 + g 74 -9.2 -3.76224 | opp_overlap 1397994 GGGGCAAAATGGTAG GCCAGTGG TTTA CCACAGGC TTTACTGAATGCGGC YPTB1172 1400031 - 1399213 - | hypothetical protein TERM 1507 1399622 - 1399638 + g 75 -3.6 -5.09426 | ACAACCCAACCCATG CGCCCG ACTGA TGGGTG TTTTTTCACCTTGAA TERM 1508 1400088 - 1400098 + r 78 -2.4 -5.44119 | CCTAAATGACGGTTT AGCC TAA GGCA TTTTTTTGAGCTAAA modF 1401738 - 1400248 - | putative molybdenum transport ATP-binding protein ModF TERM 1509 1400669 - 1400654 - G 77 -4 -5.16572 | gap 1, overlap 1400665 1400668 ATCGAATCGAAAAAA CCG-GAT AAA ATCACGG TACGTACACGGGTGC TERM 1510 1401397 - 1401375 - G 78 -11.3 -3.38046 | overlap 1401373 GGCTGATTCCAAATA GCGCTGCCA GTTGT TGACAGCGC TGCGGGTCACGGGCC modE 1402639 - 1401848 - | DNA-binding transcriptional regulator ModE TERM 1511 1402776 - 1402815 + H 78 -9.6 -3.59279 | gap 1, opp_overlap 1402778 1402790, overlap 1402808 ATAACAGGGTTAATT CATTGCTG-ATATCATTTA CAG TAAATGATAGGCAGCAGTG TTGGTTATTGTGATA YPTB1175 1402871 - 1403023 + | hypothetical protein TERM 1512 1403074 - 1403097 + F 89 -7.4 -5.04175 | TCTCTGATTTCTGAA TGCCTGGCGT ATAA ACGTTGGGCA TTTTTGTATCATTCC modA 1403258 - 1404037 + | molybdate transporter periplasmic protein modB 1404037 - 1404732 + | molybdate ABC transporter permease protein TERM 1513 1404730 - 1404712 - f 100 -8.8 -5.01732 | overlap 1404713 AATTGGGGTAAAAAA CGCATGGG GGC CCCATGCT AGAACTGAATTTCAG TERM 1514 1404729 - 1404713 - f 100 -12.3 -3.60316 | overlap 1404712 ATTGGGGTAAAAAAC GCATGGG GGC CCCATGC TAGAACTGAATTTCA modC 1404726 - 1405805 + | molybdate transporter ATP-binding protein YPTB1179 1406682 - 1405861 - | phosphotransferase YPTB1180 1406973 - 1407977 + | 6-phosphogluconolactonase bioA 1409442 - 1408162 - | adenosylmethionine--8-amino-7-oxononanoate transaminase TERM 1515 1408308 - 1408298 - G 74 -6.8 -4.36914 | CCCTGTTCGACAAAA CTGC GTT GCAG GCGGGCGACATTAAC bioB 1409541 - 1410578 + | biotin synthase bioF 1410578 - 1411729 + | 8-amino-7-oxononanoate synthase TERM 1516 1412240 - 1412251 + G 74 -3 -5.09426 | GGTGGATGGTCAGCG TCAT GTAA ATGA TTTTTTGCCATTACA bioC 1411713 - 1412516 + | biotin synthesis protein BioC TERM 1517 1412722 - 1412735 + G 78 -5.3 -5.00616 | opp_overlap 1412722 CTCGGTTACTCACAA GTGAA TCCG TTCAC TTTTTTGGAAGCGAC bioD 1412509 - 1413231 + | dithiobiotin synthetase YPTB1186 1414169 - 1413459 - | putative ABC branched chain amino acid transporter, ATP binding subunit TERM 1518 1413832 - 1413812 - G 100 -9 -4.6856 | gap 1, opp_overlap 1413812 1413811 GAAATAGCTCAAAAA CCCAGCCCG GAAT CGGG-TGGG ATTTGTGGCGGCCTG TERM 1519 1413940 - 1413963 + g 76 -8.2 -4.09739 | CCTAACGCATTGCGT CTTTCAACAG GCTG CTGTTGCAAG TTTTGCGGGGGTTCA TERM 1520 1414786 - 1414798 + H 76 -2.7 -5.26119 | overlap 1414787 GGCCGTCCATCTCCA TTTCA TCG TGAAG TTTTGTTTTTCGCCA TERM 1521 1415368 - 1415349 - g 73 -7.8 -4.08216 | overlap 1415350 1415364 1415366 GGAGGGGCTGGAAAA TGGTCTGG CACA CCAGACCC TGCTAGGCGTAACAG TERM 1522 1415367 - 1415350 - g 74 -11.3 -3.04715 | overlap 1415349 1415364 1415366 GAGGGGCTGGAAAAT GGTCTGG CACA CCAGACC CTGCTAGGCGTAACA uvrB 1415260 - 1417275 + | excinuclease ABC subunit B YPTB1188 1417586 - 1417831 + | hypothetical protein YPTB1189 1418885 - 1417962 - | hypothetical protein moaA 1419417 - 1420397 + | molybdenum cofactor biosynthesis protein A moaC 1420620 - 1421099 + | molybdenum cofactor biosynthesis protein C moaD 1421096 - 1421341 + | molybdopterin synthase small subunit MoaE 1421341 - 1421796 + | molybdopterin synthase large subunit TERM 1523 1422139 - 1422152 + G 83 -3.8 -5.38549 | overlap 1422137 TGGCTTGATTATTGC CCAG CTTGGT CTGG TTTTTGTTATTTCCG YPTB1194 1421939 - 1422649 + | stationary phase anti-death family (SAD), acetate uptake TERM 1524 1422712 - 1422732 + T 100 -11.2 -5.77734 | opp_overlap 1422712 GTTTGAGATAGTAAA GGACACCA AAATC TGGTGTCC TTTTTGTTTTTCTTT TERM 1525 1422732 - 1422712 - T 100 -11.9 -3.88498 | opp_overlap 1422712 GTTTGAGATAGTAAA GGACACCAA AAT CTGGTGTCC TTTTTGTTTTTCTTT betA 1424563 - 1422860 - | choline dehydrogenase betB 1426058 - 1424586 - | betaine aldehyde dehydrogenase TERM 1526 1425903 - 1425915 + g 75 -10.5 -3.3197 | CTGACCTTGTTTGGC GGCGG CTA CCGCC TTATCAACATCCTGT betI 1426712 - 1426116 - | transcriptional regulator BetI TERM 1527 1426535 - 1426551 + g 71 -4.4 -4.82901 | opp_overlap 1426527, overlap 1426527 TCAGATACCTCATTG TGGCTT CTAGC AGGCCA TTTTTGTCACGGAAA betT 1427078 - 1429126 + | choline transport protein BetT YPTB1199 1429367 - 1430260 + | DNA-binding transcriptional activator XapR YPTB1200 1431179 - 1430298 - | DMT superfamily drug/metabolite efflux pump xapA 1431492 - 1432355 + | purine nucleoside phosphorylase TERM 1528 1433132 - 1433117 - g 77 -4.8 -4.9138 | opp_overlap 1433117 ATTATTTAAACAAAA GAAAAT GGCT ATTTTC TTCCTGTTTGCCATG xapB 1432494 - 1433750 + | major facilitator superfamily xanthosine permease TERM 1529 1433797 - 1433829 + T 73 -5.6 -4.51238 | opp_overlap 1433799, overlap 1433798 1433799 ATAGACTCTCCAGAT AACCCCTGATTAAT CAAAT GTTAATCAGGGGAG TTTCTATTTTATCGG TERM 1530 1433798 - 1433828 + T 71 -9.1 -3.29658 | opp_overlap 1433799, overlap 1433797 1433799 TAGACTCTCCAGATA ACCCCTGATTAAT CAAAT GTTAATCAGGGGA GTTTCTATTTTATCG TERM 1531 1433799 - 1433827 + T 86 -12.6 -2.5671 | opp_overlap 1433799, overlap 1433798 1433797 AGACTCTCCAGATAA CCCCTGATTAAT CAAAT GTTAATCAGGGG AGTTTCTATTTTATC TERM 1532 1433827 - 1433799 - T 91 -11.9 -3.49102 | opp_overlap 1433799 1433798 1433797 AGACTCTCCAGATAA CCCCTGATTAA TCAAATG TTAATCAGGGG AGTTTCTATTTTATC zraP 1434311 - 1433838 - | zinc resistance protein TERM 1533 1434612 - 1434565 - H 100 -21 -4.76041 | gap 1, opp_overlap 1434575 TACATTCAGTAAAAA CGGGTAATTATTACCCACAGTAG CGG CGA-TGTGGGTAATAATTACCCG CCACCAATTCATTGA TERM 1534 1435273 - 1435293 + G 77 -4 -5.12474 | opp_overlap 1435267 1435273 GCGATGCAAGCAAAA GATATTCG CAATA CGATTATC TTTTTGTCTATTCTC YPTB1204 1434661 - 1436475 + | two component histidine kinase-sensor hydG 1436462 - 1437826 + | transcriptional regulatory protein hydG morB 1438174 - 1439283 + | morphinone reductase YPTB1207 1440195 - 1439284 - | LysR family transcriptional regulator TERM 1535 1440446 - 1440436 - H 90 -4 -5.64274 | opp_overlap 1440436, overlap 1440442 TCATGGATAAAAAAA CAAT CAT ATTG ATTTCCTCAATAACA YPTB1208 1440765 - 1441091 + | hypothetical protein YPTB1209 1442236 - 1441130 - | multidrug ABC transporter permease YPTB1210 1443424 - 1442249 - | multidrug ABC transporter permease TERM 1536 1442502 - 1442483 - G 73 -5 -4.66609 | gap 1, opp_overlap 1442492, overlap 1442460 1442484 1442485 TACCGCAGGCAAAAA TG-CCGCGT TCA ACGCGATCA TCGCGGCGTTAAATT YPTB1211 1445171 - 1443429 - | ABC transporter ATPase YPTB1212 1446171 - 1445185 - | hypothetical protein TERM 1537 1445290 - 1445303 + g 71 -4.5 -4.63184 | GTCGGTGCGTAAATC CGGTG TTTC CACTG TTTTTGGCGTGAATT YPTB1213 1446933 - 1446223 - | putative DNA-binding transcriptional regulator rhlE 1447324 - 1448679 + | ATP-dependent RNA helicase RhlE TERM 1538 1448739 - 1448722 - f 76 -6.9 -4.431 | opp_overlap 1448722 1448735 TATTCACTGATAAAA CCGCTTC TTAG GAGGCGG TTTTTTTATCAAAAT TERM 1539 1448722 - 1448739 + F 100 -9.1 -5.61596 | opp_overlap 1448722, overlap 1448735 TATTCACTGATAAAA CCGCTTC TTAG GAGGCGG TTTTTTTATCAAAAT TERM 1540 1449296 - 1449286 - g 83 -4 -5.44721 | overlap 1449295 ATTACTGTAAAAAAA TCTA TAG TAGA TAAAAATATCACCAC TERM 1541 1449325 - 1449303 - g 87 -6.3 -5.02502 | opp_overlap 1449305, overlap 1449295 1449305 TATAGTAGATAAAAA TATCACCAC AGTAA GTGGTGATG TTAACGCGGTGAATT TERM 1542 1449323 - 1449305 - g 78 -8.9 -4.12748 | opp_overlap 1449305, overlap 1449295 1449303 TAGTAGATAAAAATA TCACCAC AGTAA GTGGTGA TGTTAACGCGGTGAA YPTB1215 1449052 - 1449981 + | hypothetical protein TERM 1543 1449997 - 1450045 + F 88 -9.8 -4.07687 | gap 1, opp_overlap 1450027, overlap 1450000 AATACGTATTTAGAC TATCTCTTTGGCAATGTCCATTT TCAT AAATGGGCATTGCCCATGGG-TA TTTTACCACACGACT TERM 1544 1450000 - 1450043 + F 100 -14 -3.63744 | opp_overlap 1450027, overlap 1449997 ACGTATTTAGACTAT CTCTTTGGCAATGTCCATTT TCAT AAATGGGCATTGCCCATGGG TATTTTACCACACGA TERM 1545 1450039 - 1450027 - f 78 -9.1 -3.87815 | opp_overlap 1450000 1449997 GTCCATTTTCATAAA TGGGC ATT GCCCA TGGGTATTTTACCAC YPTB1216 1450275 - 1451219 + | tRNA-dihydrouridine synthase C pbpG 1451812 - 1452747 + | D-alanyl-D-alanine endopeptidase TERM 1546 1452771 - 1452800 + T 100 -13 -3.7791 | opp_overlap 1452771 CATCGCGACTGAGAA GCGGAATTTGCT AGCAGA GGCAAATTCCGC TTTAGTGACTAATTG TERM 1547 1452800 - 1452771 - T 95 -12.3 -3.35996 | opp_overlap 1452771 CATCGCGACTGAGAA GCGGAATTTGC TAGCAGAG GCAAATTCCGC TTTAGTGACTAATTG dld 1454583 - 1452868 - | D-lactate dehydrogenase TERM 1548 1453669 - 1453641 - G 73 -3.2 -4.87626 | gap 1 CCGCAATATCAAAAA TATCAC-GGTGCA GATA TTCACCCGCGATA GGTAAATGTTTAAAG TERM 1549 1455252 - 1455242 - g 71 -6.8 -4.13995 | opp_overlap 1455241 GCTTGATAAATTAAA GGCA GAA TGCC GTGATTTTGCCAATA cyaB 1454790 - 1455329 + | adenylate cyclase 2 YPTB1220 1455696 - 1455355 - | hypothetical protein TERM 1550 1456077 - 1456090 + G 73 -2.3 -5.0707 | opp_overlap 1456051 1456078, overlap 1456078 TGCAGTCGTGCAACA AGACC TGAG GGTCG TTTATTTTTATATTT YPTB1221 1456009 - 1457112 + | hypothetical protein YPTB1222 1457297 - 1457545 + | hypothetical protein TERM 1551 1457681 - 1457642 - f 80 -8.7 -3.96298 | opp_overlap 1457653, overlap 1457647 1457653 CAGTCATTAATTAAA CACACGAAAAAGGTGGC TATTTT GTCACCTTTTTCACATG CAACTATCATCAATA TERM 1552 1457653 - 1457670 + F 71 -4.8 -4.62069 | opp_overlap 1457647 1457642 1457653 TAAACACACGAAAAA GGTGGC TATTTT GTCACC TTTTTCACATGCAAC TERM 1553 1458386 - 1458376 - g 73 -5.4 -4.62069 | opp_overlap 1458376, overlap 1458350 1458378 1458383 GTTGGACCCTAAAAA TACG ACA CGTA TTATGAATACGTTAC phnC 1457753 - 1458589 + | ABC transport ATP-binding subunit, phnC phnD 1458626 - 1459555 + | ABC periplasmic phosphonate binding protein, phnD TERM 1554 1459578 - 1459604 + F 75 -5.9 -4.70659 | gap 1, opp_overlap 1459580, overlap 1459580 1459582 CAACGGATAAAACAA CA-TGGCTCTGG TTCG CCGGAGCTATTG TTTTTAGGTGTGGCA TERM 1555 1459580 - 1459601 + F 93 -8.7 -4.46215 | opp_overlap 1459580, overlap 1459578 1459582 ACGGATAAAACAACA TGGCTCTGG TTCG CCGGAGCTA TTGTTTTTAGGTGTG TERM 1556 1459582 - 1459599 + F 78 -9.1 -3.82353 | opp_overlap 1459580, overlap 1459580 1459578 GGATAAAACAACATG GCTCTGG TTCG CCGGAGC TATTGTTTTTAGGTG phnE1 1459719 - 1460519 + | ABC transport permease subunit, phnE TERM 1557 1460597 - 1460575 - g 74 -4 -5.00196 | GCTGAAACAACAAAA TCCGCAGCTT TTC AGGCAGCAGA AACGTTATATCAGAT phnE2 1460516 - 1461403 + | ABC transport permease subunit, phnE TERM 1558 1461571 - 1461586 + F 74 -4 -4.94243 | gap 1, overlap 1461573 1461575 CAATACTGCCCGCTA GA-CGTC AAA GACGCTC TTTTAGTTTTTTTGC TERM 1559 1461936 - 1461924 - g 75 -3.3 -5.00884 | overlap 1461925 ATTGTGTTGAAAAAA CTGCG TGT CGCAT TCGAATTGAAAGACA YPTB1227 1461648 - 1462121 + | hypothetical protein YPTB1228 1462570 - 1463838 + | ABC type periplasmic branched chain aa binding protein TERM 1560 1463898 - 1463929 + F 100 -10.9 -4.57837 | overlap 1463900 GGTAATCGCTGTGAC GTGCTGATGTCAG CGGGAT CTGACGTCAGCTC TTTTTCACCACATAT TERM 1561 1463900 - 1463927 + F 100 -12.1 -3.90316 | overlap 1463898 TAATCGCTGTGACGT GCTGATGTCAG CGGGAT CTGACGTCAGC TCTTTTTCACCACAT YPTB1229 1463962 - 1465563 + | ABC type branched-chain amino acid transporter, permease protein YPTB1230 1465563 - 1466639 + | ABC type branched-chain amino acid transporter, permease protein TERM 1562 1467065 - 1467055 - g 89 -3.2 -5.61596 | ACTGGCACAAAAAAA CCAT AAA ACGG TGTGGGCCAGCTTGT YPTB1231 1466636 - 1467472 + | ABC branch chain aa transporter, ATP-binding subunit TERM 1563 1467949 - 1467963 + G 70 -7.8 -3.90318 | opp_overlap 1467940 1467938 1467949 ACAAGAGATGAAGCA TCGCCG TGG TGGCGA TTTATCCGGTGGTCA TERM 1564 1468127 - 1468141 + G 100 -10 -4.67635 | GGGGATATGGCTATC CTGCTC GTG GAGCAG TTTTATGATTTTGCC YPTB1232 1467566 - 1468264 + | ABC branched chain aa transporter, ATP-binding subunit YPTB1233 1468379 - 1469236 + | hypothetical protein YPTB1234 1469260 - 1470675 + | putative pyridoxal-dependent decarboxylase TERM 1565 1470860 - 1470878 + T 72 -8.1 -3.83026 | ATGAGTCATGTCAGT GGCTGGT GGTGA GCCAGCC TTTGGTATCACGCCA YPTB1235 1471740 - 1470886 - | putative sulfurtransferase TERM 1566 1472673 - 1472662 - g 72 -5.8 -4.31737 | AAAACCACCAATAAA TCCC AACT GGGA GCAACCAAAGTCGTA YPTB1236 1472476 - 1473408 + | ABC type periplasmic choline/glycine/betaine binding protein TERM 1567 1473415 - 1473405 - f 71 -4 -4.7497 | overlap 1473412 CGGATTTATTAAAAA CTAA CCA TTAG CTGGGGGAGCCAGCC YPTB1237 1473669 - 1474823 + | ABC type choline/glycine/betaine transporter, permease subunit YPTB1238 1474820 - 1475758 + | ABC type choline/glycine/betaine transporter, ATP-binding subunit YPTB1239 1475755 - 1476591 + | ABC type choline/glycine/betaine transporter, permease subunit TERM 1568 1478076 - 1478092 + G 76 -10.9 -3.13376 | overlap 1478061 1478075 1478074 1478070 TATTTCGCCGAATGC GGCCAAA GAG TTTGGCC TGGTTTCTTCCGTTT YPTB1240 1477045 - 1478379 + | arginine:agmatin antiporter TERM 1569 1480619 - 1480642 + G 74 -11.1 -2.81207 | overlap 1480618 CGGGGGAGAGTTTTG GTAGCCATG AAGAAC CATGGCTAC GTTATATCTTAAGTA YPTB1241 1478449 - 1480755 + | arginine decarboxylase YPTB1242 1481091 - 1480873 - | hypothetical protein YPTB1243 1482106 - 1481216 - | hypothetical protein TERM 1570 1482454 - 1482437 - R 100 -12.7 -5.0133 | GAGTGGCGTAAAAAA GCCGGGA ATAA TCCCGGC ATAATAAATACATTC YPTB1244 1483633 - 1482518 - | porin TERM 1571 1482767 - 1482780 + g 73 -5.3 -4.63218 | opp_overlap 1482755 1482767, overlap 1482755 ATATTGAGCCACTAA CTCAA TGTT TTGAG TTTTATTAGCAAAAC TERM 1572 1483803 - 1483815 + H 74 -7.7 -4.07568 | overlap 1483790 1483813 TCCTACTTTGGTTAA CACCA AGC TGGTG TTTTAGCGCGAGCGA TERM 1573 1484794 - 1484784 - g 73 -2.4 -5.02476 | ATACCGGCCAAAAAA TCCC CCT GGGC TCGCCCATCCTGAAC TERM 1574 1485146 - 1485136 - g 73 -5.4 -4.65895 | GCGGCGATGGAAAAA GCAT CGA ATGC GCCGATTTCTAAATG dinG 1483903 - 1486083 + | ATP-dependent DNA helicase DinG TERM 1575 1486129 - 1486087 - T 84 -6.5 -4.93318 | gap 1, overlap 1486089 GATAAGCCATAAAAA TACACCTCCAAATGTCAG GGGGTTAT CCAACATTTGG-GGTGCA GTTCAAAGGGGCTGA TERM 1576 1486127 - 1486089 - T 71 -6.9 -4.07789 | gap 1, overlap 1486087 TAAGCCATAAAAATA CACCTCCAAATGTCAG GGGGTTAT CCAACATTTGG-GGTG CAGTTCAAAGGGGCT katA 1487593 - 1486151 - | catalase TERM 1577 1486276 - 1486256 - G 73 -9.7 -3.31501 | overlap 1486257 AGGAACTTGCGATAA CTCACCCGC AAT ACGGGTGAA CATGCGTTGATGCTC TERM 1578 1486275 - 1486257 - G 72 -11 -2.58579 | overlap 1486256 GGAACTTGCGATAAC TCACCCGC AAT ACGGGTGA ACATGCGTTGATGCT TERM 1579 1487316 - 1487331 + g 87 -5.4 -5.42862 | opp_overlap 1487316 GCCACAGTGGAGAAG CGGACA AACA TGTCTG TTTTTTTACCGATCT YPTB1247 1487951 - 1488493 + | hypothetical protein TERM 1580 1488711 - 1488684 - T 100 -15 -4.18018 | gap 1, opp_overlap 1488684 TGGGCTGACGGAAAA GGGCGCAT-TCCT ATC AGGATATGCGCCC TTATTATTGCTTACG TERM 1581 1488684 - 1488711 + T 100 -15 -4.0342 | gap 1, opp_overlap 1488684 TGGGCTGACGGAAAA GGGCGCAT-TCCT ATC AGGATATGCGCCC TTATTATTGCTTACG tyrP 1489937 - 1488729 - | HAAAP family tyrosine/H(+) symporter TyrP YPTB1249 1490462 - 1490211 - | hypothetical protein YPTB1250 1490556 - 1491749 + | competence damage-inducible protein A TERM 1582 1491775 - 1491796 + T 95 -13 -3.20207 | opp_overlap 1491769 ATGTTAATATTTAGC CCAGGCGC GGAATA GCGCCTGG TTAATGAGTGCTATT eco 1492316 - 1491807 - | ecotin precursor YPTB1252 1492608 - 1492351 - | 2Fe-2S ferredoxin YfaE nrdB 1493742 - 1492612 - | ribonucleotide-diphosphate reductase subunit beta nrdA 1496192 - 1493904 - | ribonucleotide-diphosphate reductase subunit alpha TERM 1583 1494496 - 1494477 - G 74 -10.8 -3.03007 | overlap 1494492 AATACCTTGTGAATA CGTGGTTT CGTT AAACCACG GGCAAGCGCCTTGTT TERM 1584 1495301 - 1495284 - G 73 -8.4 -3.7941 | CATTGGGTAGAACAA CGTGGC CGCGCC GCCACG AACACCGCCCTGTGA TERM 1585 1496664 - 1496643 - R 81 -10.9 -3.27786 | gap 1, opp_overlap 1496637 1496636 1496658, overlap 1496635 GGGAAAAGCCAGGAA GAGCAGGTGC TTA GC-CCTGCTC CCAGTGGGTTCTACG ubiG 1497414 - 1496686 - | 3-demethylubiquinone-9 3-methyltransferase TERM 1586 1498340 - 1498319 - g 72 -5.9 -4.48263 | overlap 1498311 TATAGAAGATGAAAA CATCAGC ATTGAAGG GCTGATG GAGTATATCCCTGGC gyrA 1497714 - 1500407 + | DNA gyrase subunit A TERM 1587 1500421 - 1500444 + F 77 -11 -2.81547 | overlap 1500419 AATAATGTTGCTCTG GCAGGTGCGG TTTA TTGCACCTGC TCATTCATCTGCGGC TERM 1588 1500543 - 1500494 - f 81 -5.2 -5.14563 | opp_overlap 1500496, overlap 1500496 CGTGTCATTAAAAAA CAGCCAGC-CAGTGAGCTTAAC GCCCATCA GTTAAGCA-ACTGAGCTGGCTT TTTTATCGGTTATCG TERM 1589 1500541 - 1500496 - f 76 -7.8 -4.20707 | opp_overlap 1500496, overlap 1500494 TGTCATTAAAAAACA GCCAGC-CAGTGAGCTTAAC GCCCATCA GTTAAGCA-ACTGAGCTGGC TTTTTTATCGGTTAT TERM 1590 1500496 - 1500541 + F 100 -7.8 -5.3236 | opp_overlap 1500496 1500494 TGTCATTAAAAAACA GCCAGC-CAGTGAGCTTAAC GCCCATCA GTTAAGCA-ACTGAGCTGGC TTTTTTATCGGTTAT TERM 1591 1500766 - 1500754 - g 95 -3.3 -5.95166 | CTTAACGAAAAAAAA GCCGA TAT TCGTC AGGAATATAACAACA TERM 1592 1500895 - 1500870 - g 81 -6.1 -4.96848 | opp_overlap 1500882 1500885, overlap 1500872 TCGGCTAGATAAAAA CGCCAGTGACA CTGA TGCCACTAGTG GCATGGTTATGAATA TERM 1593 1501310 - 1501322 + G 75 -3.3 -5.09762 | overlap 1501296 GCTTTGAGCAGAGTG TCCGC TTG GAGGA TTTTATTTCTTCCCG rcsC 1500595 - 1503468 + | hybrid sensory kinase in two-component regulatory system with RcsB and YojN TERM 1594 1503512 - 1503486 - T 100 -15.2 -3.83844 | TTCATTAATTAATAA GCCCAGTATTGC AGA GCAAAACTGGGC TTGAGAGTCGAGCGG rcsB 1504189 - 1503536 - | transcriptional regulator RcsB YPTB1259 1506885 - 1504192 - | phosphotransfer intermediate protein in two-component regulatory system with RcsBC TERM 1595 1504244 - 1504232 - G 74 -2.7 -5.14563 | opp_overlap 1504209 CTGGTGATGAAAAAA TCAAT CTG ACTGA TGCTATTTTCGATCT TERM 1596 1504471 - 1504483 + g 75 -7.7 -4.14193 | ACTGGTTTTTAGTTG CCTCT CAT AGAGG TTTATATCATCTTCT TERM 1597 1505715 - 1505729 + g 80 -4.2 -5.31456 | overlap 1505716 CACCGTGGTGCTGCT CTGCCA TAG TGGCAA TTTTTTGTAGATTCA TERM 1598 1506112 - 1506124 + g 71 -10.5 -2.75183 | overlap 1506109 TGCCGCAATATCTTC GGGGG TAG CCCCC TCATTGAGTGGCACT YPTB1260 1508063 - 1506909 - | putative MFS tranporter TERM 1599 1508783 - 1508769 - H 100 -11.4 -5.626 | GACCGGAGAAAAAAA CCGGTC AGA GACCGG TCGTAACATTAACGA YPTB1261 1509158 - 1510282 + | outer membrane porin protein C TERM 1600 1510310 - 1510335 + T 100 -15.5 -3.80733 | opp_overlap 1510314, overlap 1510314 GCGTGAGTCCTGAGA GAAACGCGGTC ATTC GGCCGCGTTTC TTATTGTGAGCTACG TERM 1601 1510314 - 1510331 + T 100 -10.5 -4.51812 | opp_overlap 1510314, overlap 1510310 GAGTCCTGAGAGAAA CGCGGTC ATTC GGCCGCG TTTCTTATTGTGAGC TERM 1602 1510331 - 1510314 - T 77 -8.3 -4.0371 | opp_overlap 1510314 1510310 GAGTCCTGAGAGAAA CGCGGTC ATTC GGCCGCG TTTCTTATTGTGAGC TERM 1603 1510867 - 1510843 - T 100 -13 -4.90266 | opp_overlap 1510843 GGCACCAATTAAAAA CCCGTTATCT GAATA AGATAACGGG TTTTTGCTTTTCTCT TERM 1604 1510843 - 1510867 + T 100 -13 -5.15526 | opp_overlap 1510843 GGCACCAATTAAAAA CCCGTTATCT GAATA AGATAACGGG TTTTTGCTTTTCTCT TERM 1605 1510919 - 1510931 + T 77 -10.5 -3.22858 | overlap 1510918 1510928 GCTTATCCAGCATGT GCCCG GTG CGGGC TATTGCTCTCATTAC ampH 1512188 - 1511022 - | beta-lactamase/D-alanine carboxypeptidase TERM 1606 1511164 - 1511176 + g 80 -4.7 -5.1101 | opp_overlap 1511161 1511164 TAAGTAATAAATCCA CCGCC ACC GCCGG TTTTTTGCATAATGC TERM 1607 1511680 - 1511698 + g 71 -3.1 -5.00616 | gap 1 CGATTATCTTTGGTC GGCCAGGT AAAC ACC-GGTC TTTTTTGCGGGCCGC TERM 1608 1512444 - 1512410 - R 93 -13.6 -2.65388 | opp_overlap 1512416 1512439, overlap 1512416 CAGGGAAGGGAGAAG CAAAAACCGCACTGGC GGG ACCGGTGCGGTTTGTG GTCACGACCAGAAAT TERM 1609 1512416 - 1512438 + r 100 -12.7 -3.96148 | opp_overlap 1512410 1512416 AGGGAGAAGCAAAAA CCGCACTGG CGGGA CCGGTGCGG TTTGTGGTCACGACC TERM 1610 1512438 - 1512416 - R 100 -11.2 -4.93968 | opp_overlap 1512416, overlap 1512410 AGGGAGAAGCAAAAA CCGCACTGGC GGG ACCGGTGCGG TTTGTGGTCACGACC YPTB1263 1513989 - 1512463 - | GPH family oligogalacturonide symporter TERM 1611 1512600 - 1512610 + g 80 -6.8 -4.7373 | overlap 1512571 CGGGGATATCTGCCA TGGC ACC GCCA TTTTTAATACGCTCA TERM 1612 1514142 - 1514117 - H 76 -10.7 -2.71325 | opp_overlap 1514117, overlap 1514114 1514133 CGACGTAGAAAGCCA TGTATATCAAT AAAA ATTGATATACA TCAATTGAGAGGAAG TERM 1613 1514117 - 1514142 + H 76 -10.7 -2.52464 | opp_overlap 1514114 1514117 1514133 CGACGTAGAAAGCCA TGTATATCAAT AAAA ATTGATATACA TCAATTGAGAGGAAG TERM 1614 1514146 - 1514133 - H 77 -3.9 -5.16841 | opp_overlap 1514117, overlap 1514117 1514114 GTATATCAATAAAAA TTGAT ATAC ATCAA TTGAGAGGAAGACGC YPTB1264 1514366 - 1515394 + | hypothetical protein tsr2 1517255 - 1515468 - | putative methyl-accepting chemotaxis protein pla2 1518597 - 1517662 - | outer membrane protease TERM 1615 1518692 - 1518682 - R 84 -2.6 -5.66989 | opp_overlap 1518682, overlap 1518673 TAAAGATTAAAAAAA TTTT AAA AAAA TTAATTTCTCATTGA msgA 1519011 - 1518769 - | putative stress response protein YPTB1268 1519939 - 1519217 - | putative cI prophage repressor protein YPTB1269 1520213 - 1520692 + | phage antitermination protein Q TERM 1616 1520780 - 1520768 - f 74 -4.9 -4.8743 | opp_overlap 1520772, overlap 1520760 TCTAAAATAAATAAA GTTAT TTA ATAAC ATTAAGTTAAATTGA YPTB1270 1520894 - 1522207 + | hypothetical protein YPTB1272 1522935 - 1523750 + | putative transcriptional regulatory protein YPTB1273 1523726 - 1524520 + | hypothetical protein TERM 1617 1524549 - 1524575 + F 100 -8.1 -5.30189 | gap 1, overlap 1524554 TGTATAGCTAACTGT GATAGGCCACAC TTCG GTGTGGC-TGTC TTTTTTCATCTTATA TERM 1618 1524554 - 1524571 + F 90 -11.3 -3.7035 | overlap 1524549 AGCTAACTGTGATAG GCCACAC TTCG GTGTGGC TGTCTTTTTTCATCT TERM 1619 1524877 - 1524890 + F 100 -8.1 -6.04953 | AAGACCGATTAACTT CCTGC TGTG GCAGG TTTTTTTGTTTCTAT TERM 1620 1525018 - 1525056 + F 83 -11.8 -2.89564 | opp_overlap 1525019 1525022 1525028, overlap 1525022 1525029 TTACATACTGAGTAA ACAATAAGAAGCCCCAGC ATC GCCGGGGTTTTTTATTGC TGTCTGAAATAGGCG TERM 1621 1525055 - 1525019 - f 100 -13.1 -3.78736 | opp_overlap 1525018 1525022 1525029, overlap 1525022 1525028 TACATACTGAGTAAA CAATAAGAAGCCCCAGC ATC GCCGGGGTTTTTTATTG CTGTCTGAAATAGGC TERM 1622 1525052 - 1525022 - f 80 -9 -4.01902 | opp_overlap 1525018 1525022 1525029, overlap 1525019 1525028 ATACTGAGTAAACAA TAAGAAGCCCCAGC ATC GCCGGGGTTTTTTA TTGCTGTCTGAAATA TERM 1623 1525022 - 1525052 + F 81 -11.2 -3.32498 | opp_overlap 1525022 1525019 1525028, overlap 1525018 1525029 ATACTGAGTAAACAA TAAGAAGCCCCAGC ATC GCCGGGGTTTTTTA TTGCTGTCTGAAATA TERM 1624 1525046 - 1525028 - f 76 -8 -4.16937 | opp_overlap 1525022 1525018 1525029, overlap 1525022 1525019 AGTAAACAATAAGAA GCCCCAGC ATC GCCGGGGT TTTTTATTGCTGTCT TERM 1625 1525029 - 1525045 + F 100 -9.3 -5.5353 | opp_overlap 1525028 1525022 1525019, overlap 1525022 1525018 GTAAACAATAAGAAG CCCCAGC ATC GCCGGGG TTTTTTATTGCTGTC YPTB1274 1525116 - 1525406 + | putative bacteriophage protein YPTB1275 1525422 - 1526069 + | putative bacteriophage ATP-binding protein YPTB1276 1526074 - 1526268 + | putative bacteriophage protein TERM 1626 1526596 - 1526610 + G 73 -7.8 -4.06633 | CCATCAATACGGCGG CATCGG AGA CCGGTG TTATTTCACTTTATA YPTB1277 1526265 - 1527773 + | putative bacteriophage tail sheath protein TERM 1627 1527822 - 1527812 - g 71 -8.2 -3.64103 | GAGCGATACTTCAAA CCGC CTG GCGG GTACGGCGTATGTCA YPTB1278 1527795 - 1528163 + | hypothetical protein TERM 1628 1528248 - 1528230 - g 91 -13.2 -3.38316 | TCACGACGCAAGCAA GACCACCT ATG AGGTGGTC GAACTCAGCGAACCT YPTB1279 1528165 - 1528464 + | putative bacteriophage protein YPTB1280 1528585 - 1530078 + | putative bacteriophage coat protein TERM 1629 1530209 - 1530183 - f 84 -10.1 -3.82218 | gap 1, opp_overlap 1530192, overlap 1530184 1530199 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 1630 1530210 - 1530184 - f 72 -10.1 -2.88849 | gap 1, opp_overlap 1530192, overlap 1530183 1530199 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT TERM 1631 1530290 - 1530303 + F 100 -9.5 -5.4387 | GTCAATAACCTCGAA CCCGC TCCA GCGGG TTTTTTACTTTCTGT YPTB1281 1530345 - 1531751 + | putative bacteriophage protein YPTB1282 1531748 - 1532803 + | putative bacteriophage tail protein TERM 1632 1532884 - 1532895 + G 71 -7.2 -4.07568 | overlap 1532881 GCTGCTGGGGATCGG GCGG GTGA CCGC TTTTGACGACAGCAA YPTB1283 1532819 - 1533415 + | putative bacteriophage (baseplate assembly) protein YPTB1284 1533412 - 1533867 + | putative bacteriophage protein GP46 YPTB1285 1533871 - 1535007 + | putative bacteriophage protein YPTB1286 1535004 - 1535606 + | putative bacteriophage protein GP48 TERM 1633 1535775 - 1535747 - g 70 -9.5 -3.25942 | opp_overlap 1535734 1535774, overlap 1535733 1535758 ACGCGCCGACAGTAA CGGCGAATTTACC GAC GGCAACGTCGCCG GTGGCGTTCCACCCA YPTB1287 1535703 - 1536419 + | putative bacteriophage tail fiber protein YPTB1288 1536421 - 1536840 + | putative tail fiber assembly protein p37 TERM 1634 1536849 - 1536873 + F 75 -7.2 -4.33621 | gap 1, opp_overlap 1536852, overlap 1536850 1536852 AGAATAGTAAATAGC TA-ACCGGGCG TAAT TGCCCGGTATA TTTATTAATTCACTG TERM 1635 1536850 - 1536871 + F 72 -7.9 -3.7642 | opp_overlap 1536852, overlap 1536849 1536852 GAATAGTAAATAGCT AACCGGGCG TAAT TGCCCGGTA TATTTATTAATTCAC TERM 1636 1536852 - 1536869 + F 80 -10.5 -3.45532 | opp_overlap 1536852, overlap 1536850 1536849 ATAGTAAATAGCTAA CCGGGCG TAAT TGCCCGG TATATTTATTAATTC TERM 1637 1536869 - 1536852 - f 76 -9.8 -3.25881 | opp_overlap 1536852 1536850 1536849 ATAGTAAATAGCTAA CCGGGC GTAATT GCCCGG TATATTTATTAATTC YPTB1289 1537280 - 1538020 + | LacI family regulatory protein TERM 1638 1539670 - 1539657 - g 77 -4.5 -4.84359 | TTATGTCGATAAAAA CGATG ATGG CACCG GTACAATGGCGCGTT bglA 1538311 - 1539747 + | 6-phospho-beta-glucosidase TERM 1639 1539793 - 1539814 + T 100 -12.3 -4.8143 | opp_overlap 1539792 1539791 TTGAATTCAAGAAGG CCGTTCACC CTTT GGTGAGCGG TTTTTACCTTGTTAC YPTB1291 1540235 - 1539873 - | hypothetical protein TERM 1640 1539997 - 1539982 - G 72 -6.2 -4.34402 | opp_overlap 1539981 TCTTTCATATCAAAA GGATAA CCTA TTATCC CAGTTTTTAATTTAA YPTB1292 1541105 - 1540821 - | hypothetical protein YPTB1293 1541391 - 1541134 - | hypothetical protein TERM 1641 1542724 - 1542687 - R 87 -8.6 -4.5464 | overlap 1542688 TATATATAAGCAAAA GTATGTTGGTTCAGAT TGAACT AACTGAACCAACATAA AAACCTCGCATGTGA TERM 1642 1542723 - 1542688 - R 89 -12.1 -3.317 | overlap 1542687 ATATATAAGCAAAAG TATGTTGGTTCAGAT TGAACT AACTGAACCAACATA AAAACCTCGCATGTG TERM 1643 1543155 - 1543171 + r 72 -9.4 -3.17051 | overlap 1543153 CATTGAAATTATGCT GTGCCG CATCC CGGCAC TCTTGCTCATCCCAA TERM 1644 1543251 - 1543218 - R 100 -13.3 -3.91144 | opp_overlap 1543216 1543226, overlap 1543221 1543226 GCCACACTCCACAAA CGACAAAACCAACCC GAAT GGATTGGTTTTGTTG AGGTATTTGGTCGGC TERM 1645 1543248 - 1543221 - R 100 -13.6 -3.02186 | opp_overlap 1543216 1543226, overlap 1543218 1543226 ACACTCCACAAACGA CAAAACCAACCC GAAT GGATTGGTTTTG TTGAGGTATTTGGTC TERM 1646 1543243 - 1543226 - R 86 -7.7 -4.64846 | opp_overlap 1543216 1543226, overlap 1543221 1543218 CCACAAACGACAAAA CCAACCC GAAT GGATTGG TTTTGTTGAGGTATT TERM 1647 1543226 - 1543243 + r 73 -5.5 -4.6759 | opp_overlap 1543226 1543221 1543218, overlap 1543216 CCACAAACGACAAAA CCAACCC GAAT GGATTGG TTTTGTTGAGGTATT YPTB1296 1545236 - 1543440 - | hypothetical protein YPTB1297 1545491 - 1545264 - | hypothetical protein YPTB1298 1545669 - 1546673 + | nucleoid-associated protein NdpA TERM 1648 1546699 - 1546728 + T 100 -18.1 -3.57144 | opp_overlap 1546699 1546706, overlap 1546706 TGCGTATTTAGCCAA TAAAAAACGCCGC ATCA GCGGCGTTTTTTA TTTCGGCGTCCCGAA TERM 1649 1546728 - 1546699 - T 100 -18.1 -3.07816 | opp_overlap 1546699 1546706, overlap 1546706 TGCGTATTTAGCCAA TAAAAAACGCCGC ATCA GCGGCGTTTTTTA TTTCGGCGTCCCGAA TERM 1650 1546706 - 1546721 + T 100 -11.8 -5.63517 | opp_overlap 1546699 1546706, overlap 1546699 TTAGCCAATAAAAAA CGCCGC ATCA GCGGCG TTTTTTATTTCGGCG TERM 1651 1546721 - 1546706 - T 100 -11.8 -5.4833 | opp_overlap 1546706 1546699, overlap 1546699 TTAGCCAATAAAAAA CGCCGC ATCA GCGGCG TTTTTTATTTCGGCG rplY 1547045 - 1546761 - | 50S ribosomal protein L25 YPTB1300 1548964 - 1547207 - | putative DEAD box helicase family protein TERM 1652 1548654 - 1548635 - G 75 -5.8 -4.59027 | gap 1, overlap 1548637 AATCAGCAGAGAAAA TG-CGCTAT CAA ATAGCGGCA GATTACGGGCCACCG TERM 1653 1548922 - 1548912 - G 71 -6.8 -4.17048 | TGGCGTCGAAAATAA GCCA CCG TGGC ATCGACCGCTTCTCG rsuA 1549498 - 1550205 + | 16S rRNA pseudouridylate synthase A TERM 1654 1551290 - 1551307 + G 71 -9.1 -3.44622 | GTGGTTTGTGTCGCT GGCCTAG GATT CTGGGCC TTAGTTCTGGGCGTA bcr 1550384 - 1551583 + | bicyclomycin/multidrug efflux system TERM 1655 1552330 - 1552315 - f 95 -7.6 -5.00412 | AAATATAACGAAAAA TGGGAT CTGA ATCCCA AATCTACAGCTTCTG YPTB1303 1552586 - 1552930 + | hypothetical protein TERM 1656 1552946 - 1552967 + T 82 -5.8 -4.9792 | TACTTTTTAGCTGTT TGTCCGTG TGCTAT CGCGGGCA TTTTTGTCTAGGCTA yejF 1554583 - 1552991 - | oligo-dipeptide/nickel ABC transporter ATP-binding subunit TERM 1657 1553650 - 1553670 + g 75 -6.1 -4.58663 | opp_overlap 1553633 CCAGACTTTCGCCGG GCTTCAGGT CAA AACTGAGGC TTTTTAGCGCATAGT yejE 1555613 - 1554585 - | ABC oligo-dipeptide/nickel transporter, permease subunit yejB 1556713 - 1555613 - | ABC oligo-dipeptide/nickel transporter, permease subunit TERM 1658 1556217 - 1556236 + g 100 -10.7 -5.60993 | opp_overlap 1556216 CTCCAGGTATCGAAG GCGGTGC CATTGC GCACCGC TTTTTTTATCCCCAG yejA 1558531 - 1556723 - | putative ABC transporter, oligo-dipeptide/nickel binding protein TERM 1659 1557918 - 1557934 + g 72 -10.9 -2.7362 | overlap 1557917 GCGACTGGAGGGGTA CTGAGTG GGT CACTCAG CTTATGATCTTTCCA YPTB1308 1560193 - 1558613 - | hypothetical protein TERM 1660 1560732 - 1560716 - R 100 -8.7 -5.4833 | opp_overlap 1560716 TGAGCCAATAAAAAA CGCTGTC ATA AACAGCG TTTCAACGTTTGGTT TERM 1661 1560716 - 1560732 + r 70 -8 -3.65084 | opp_overlap 1560716 TGAGCCAATAAAAAA CGCTGT CATAA ACAGCG TTTCAACGTTTGGTT spr 1561363 - 1560779 - | putative outer membrane lipoprotein TERM 1662 1560975 - 1560985 + g 71 -6.8 -4.1552 | opp_overlap 1560975 CCTGGACGTAATTTA GTCC GCT GGAC TTTCTTGCCGAGATC TERM 1663 1561193 - 1561245 + g 76 -9.1 -3.82865 | opp_overlap 1561191 CGCTTCGAATTCATC CTGAGAGGCTTGCAGTAAAAGCCCA TCT TTGTCATTAACTGCACGCATCTCAG TTTGCGTATTATTTA YPTB1310 1562506 - 1561805 - | hypothetical protein TERM 1664 1562574 - 1562555 - R 89 -3.5 -5.62288 | opp_overlap 1562555 1562573 GGAAGAAAATAAAAA CGGGG AGACATCATA CCCCG TTACGTAAACGAATT YPTB1311 1563548 - 1562565 - | putative cobalamin synthesis protein TERM 1665 1563017 - 1563036 + g 73 -4.9 -4.68705 | overlap 1563027 1563030 ATTCGCTATGATACA GCGGCCG CGATAA TGGCTGC TTTTGTTGCCATTGT YPTB1312 1563863 - 1564189 + | hypothetical protein TERM 1666 1564212 - 1564240 + F 100 -15.5 -3.89524 | overlap 1564206 CAACATGTTCGGGCA TCACGGTTTATCG ACG TGATAAACCGTGA TTTATCACCTGAAGT YPTB1313 1564298 - 1565098 + | putative transcriptional regulatory protein TERM 1667 1565233 - 1565199 - T 89 -11.6 -3.4314 | opp_overlap 1565197 1565200, overlap 1565197 1565200 TAAACGCCAACAATA CCGATGAGCTGAAT AGCCTTG ATTCAGCTCATCGT CGTGTGTCTTAAGCC TERM 1668 1565200 - 1565232 + T 100 -15.1 -2.75975 | opp_overlap 1565200 1565199 1565197, overlap 1565197 AAACGCCAACAATAC CGATGAGCTGAAT AGCCTTG ATTCAGCTCATCG TCGTGTGTCTTAAGC TERM 1669 1565232 - 1565200 - T 100 -15.1 -2.65161 | opp_overlap 1565197 1565200, overlap 1565199 1565197 AAACGCCAACAATAC CGATGAGCTGAAT AGCCTTG ATTCAGCTCATCG TCGTGTGTCTTAAGC YPTB1314 1566714 - 1565242 - | putative D-mannonate oxidoreductase TERM 1670 1565964 - 1565947 - G 71 -6.9 -4.2123 | GACCCACTGAATAAA GGGTTCG CAGG CGATCCC ACAAGAGTCTGCGAC TERM 1671 1566980 - 1566968 - H 75 -3.4 -5.23292 | opp_overlap 1566968 TGACAGAAAATAAAA TTGG TAAGT CCAA TATTGATAATATTCG TERM 1672 1567250 - 1567268 + H 71 -3.2 -5.00467 | opp_overlap 1567245, overlap 1567266 CAGAAAAAGGCGGCT TTAACC GTTAGCG GGTTAA TTTTATTATTGTTGC TERM 1673 1568246 - 1568234 - g 86 -7.7 -4.83759 | AAGGAAACCCAAAAA CCTTC CAT GAAGG GGGTCATTTGCAAGG uxuA 1567306 - 1568499 + | mannonate dehydratase TERM 1674 1568555 - 1568525 - T 100 -14 -3.69482 | opp_overlap 1568534, overlap 1568526 TCAGTGAAGAGATAA CCGTTAAGGGCCGG TTT CCGGCTCTTAACGT AGAGAGACCCAATAG TERM 1675 1568554 - 1568526 - T 100 -17.5 -2.81207 | opp_overlap 1568534, overlap 1568525 CAGTGAAGAGATAAC CGTTAAGGGCCGG TTT CCGGCTCTTAACG TAGAGAGACCCAATA TERM 1676 1568534 - 1568546 + T 76 -10.5 -3.05844 | opp_overlap 1568526 1568525 AGATAACCGTTAAGG GCCGG TTT CCGGC TCTTAACGTAGAGAG YPTB1316 1569211 - 1568639 - | elongation factor P mtr 1570559 - 1569315 - | HAAAP family tryptophan-specific transporter mtr TERM 1677 1570573 - 1570592 + H 76 -7.8 -4.22375 | opp_overlap 1570577 ATCTATTGCTCCTGA GATACCCG GCTG CGGGTAAC TTCTTTATATTAAGT YPTB1318 1570971 - 1571225 + | hypothetical protein YPTB1319 1572109 - 1571294 - | putative short chain oxidoreductase TERM 1678 1571954 - 1571932 - G 72 -11.3 -2.62613 | overlap 1571931 1571929 GTTCACGTGAAATAT CGGTGCAGA TCACT TCCGCACCG GTTGCCGCCAGCCCT TERM 1679 1572160 - 1572128 - R 76 -11.1 -2.52464 | opp_overlap 1572155 CTTCTCCTTAAGTCA GTGGGCAGCGCAGTG GCT CACCGCGCAGTCCCC GTAGGGCCTCTTCAG YPTB1320 1573085 - 1572120 - | D-isomer specific 2-hydroxyacid dehydrogenase family protein YPTB1321 1574224 - 1573082 - | hypothetical protein TERM 1680 1574768 - 1574778 + G 77 -8.2 -4.2828 | overlap 1574767 GAGGCGGTTGCTGCG GCGC GGC GCGC TTTTCCTGCCTGGGC YPTB1322 1574576 - 1576072 + | putative aldehyde dehydrogenase TERM 1681 1576601 - 1576616 + G 71 -6.8 -4.24204 | gap 1, overlap 1576603 ACTGAAGTTTCGGAT GCCTCGG GGA CCG-GGC TTTTCGATGTACGTG TERM 1682 1577529 - 1577543 + G 70 -10 -3.14132 | overlap 1577525 1577526 ACCCCCCCAATCCCG CAACCG CGG CGGTTG TTGCTGAGGCCCAAC YPTB1323 1576076 - 1577629 + | putative carbohydrate kinase rpiA 1577649 - 1578359 + | putative ribose 5-phosphate isomerase YPTB1325 1578475 - 1579563 + | ABC transporter, periplasmic sugar-binding protein TERM 1683 1580739 - 1580726 - g 73 -8.1 -4.08945 | opp_overlap 1580726 AGGATCTGCCGAAAA GGCCA CGCA TGGCC TTCAATATTGGCATT YPTB1326 1579672 - 1581246 + | ABC sugar transporter, fused ATP-binding subunits TERM 1684 1581993 - 1582007 + G 75 -3.5 -5.08601 | gap 1 ATTTCAGGGTTCCTT GCC-GC ACTT GCTGGC TTTTTGTTGGCATCG TERM 1685 1582073 - 1582104 + G 78 -5.8 -4.72272 | gap 1 CTACTTGCTCTACGC CATTGCCGC-GCCCA TTA TCGGCGGCGTCAGTG TTTTTGGTGGGCACG YPTB1327 1581282 - 1582280 + | ABC sugar transporter, permease subunit YPTB1328 1582828 - 1582373 - | putative Mut family protein fruB 1583090 - 1584223 + | bifunctional fructose-specific PTS IIA/HPr protein TERM 1686 1584337 - 1584317 - g 77 -6.8 -4.59853 | TCAATCTGGTAAAAA CCGCCG GTCTGCATG CGGCGG GTAAAGGGATCAACG fruK 1584220 - 1585158 + | 1-phosphofructokinase fruA 1585173 - 1586873 + | fructose-specific PTS system IIBC component TERM 1687 1586932 - 1586957 + F 100 -13.4 -5.30686 | opp_overlap 1586932 GTCAGCAGTCTGAAA TGCCAGTCAG TTAATT CTGACTGGCA TTTTTTATGGGTGTT TERM 1688 1586957 - 1586932 - f 100 -13.4 -3.58343 | opp_overlap 1586932 GTCAGCAGTCTGAAA TGCCAGTCAG TTAATT CTGACTGGCA TTTTTTATGGGTGTT TERM 1689 1587059 - 1587036 - f 71 -8.4 -3.53224 | opp_overlap 1587036 1587051, overlap 1587051 TATTTTTTTGTTAAA TTATTAAGAT AATA ATCTTAATAA GACTTAATCTTGTGC TERM 1690 1587629 - 1587650 + G 80 -6.7 -4.77036 | CTTTTTTATCGCTAT TATGATGGT CATC ATCATCATA TTTTTCATGGTAGGA psaE 1587198 - 1587842 + | putative regulatory protein TERM 1691 1588229 - 1588201 - g 80 -4.5 -5.08831 | opp_overlap 1588200, overlap 1588189 1588203 TAATAAAAAAAATAA CGTTGTCACCTTT TTT AATGGTGACAGAG GCTTTATTGATGTCA psaF 1587839 - 1588327 + | hypothetical protein psaA 1588872 - 1589348 + | pH 6 antigen precursor (antigen 4) (adhesin) TERM 1692 1589357 - 1589398 + F 89 -6.7 -5.31855 | opp_overlap 1589360 1589361 1589363, overlap 1589360 1589361 ATTTTAAATAACGAG TAATCATAGAACATGATGG CTTG CTGTCATGTTCTATGTATG TTTTTGTTATTGATG TERM 1693 1589360 - 1589396 + F 86 -9 -4.27297 | gap 1, opp_overlap 1589360 1589361 1589363, overlap 1589357 1589361 TTAAATAACGAGTAA T-CATAGAACATGATGG CTTG CTGTCATGTTCTATGTA TGTTTTTGTTATTGA TERM 1694 1589394 - 1589361 - f 71 -9.7 -2.60492 | opp_overlap 1589360 1589357 1589361, overlap 1589360 1589363 TAAATAACGAGTAAT CATAGAACATGATGG CTTG CTGTCATGTTCTATG TATGTTTTTGTTATT TERM 1695 1589361 - 1589394 + F 100 -14.1 -3.70836 | opp_overlap 1589361 1589360 1589363, overlap 1589360 1589357 TAAATAACGAGTAAT CATAGAACATGATGG CTTG CTGTCATGTTCTATG TATGTTTTTGTTATT TERM 1696 1589414 - 1589448 + F 95 -14 -2.84192 | opp_overlap 1589438 TTTTTGTTATTGATG TTTTATTGTGAGTTTT TTT AAAATTCACAATAAAA TATCATGATAATGTG TERM 1697 1590176 - 1590158 - g 91 -3.8 -5.68438 | GGATGAAATAAAAAA TGGCAG CTATGTT CCGCCA TTCTCTTCTAGGGAT TERM 1698 1590178 - 1590190 + G 74 -4.1 -4.90079 | GCTATGTTCCGCCAT TCTCT TCT AGGGA TTTTATTATTCCGGT psaB 1589475 - 1590296 + | chaperone protein PsaB precursor TERM 1699 1591068 - 1591080 + G 75 -3.3 -5.00884 | overlap 1591069 CCTTAGGGGAGAGTT ACACC CCA GGTGA TTTTTTCGACAGCAT psaC 1590380 - 1592851 + | outer membrane usher protein PsaC precursor TERM 1700 1592904 - 1592928 + T 100 -11.4 -4.4715 | overlap 1592906 TCCCGTCAGGTTCAA TTCCCGCCAG GTTTA CTGGCGGGCA TTTTCTACGTTACAA TERM 1701 1592906 - 1592926 + T 93 -14 -2.56203 | overlap 1592904 CCGTCAGGTTCAATT CCCGCCAG GTTTA CTGGCGGG CATTTTCTACGTTAC nfo 1593795 - 1592938 - | endonuclease IV TERM 1702 1593271 - 1593281 + g 88 -8.2 -4.67608 | opp_overlap 1593268 1593270 GGTATCAATACAGAC GCCG ACG CGGC TTTTATCTTCCACTC TERM 1703 1593895 - 1593872 - R 100 -13.2 -3.75332 | overlap 1593875 AGCGGTGAAGGGAAA TAAGGGCCGC GGAT ACGGCCCTTA AACGGTTTGTTTTAG TERM 1704 1593892 - 1593875 - R 89 -10.5 -4.0098 | overlap 1593872 GGTGAAGGGAAATAA GGGCCGC GGAT ACGGCCC TTAAACGGTTTGTTT YPTB1338 1595047 - 1593959 - | hypothetical protein TERM 1705 1596431 - 1596464 + G 91 -13.3 -3.44334 | gap 1, opp_overlap 1596440, overlap 1596416 TCGCGGCGAGTGATT GCT-GATCAACTCGCC AGC GGTGAGTTGGTCGAGC TTAATATTCCTTTAC YPTB1339 1595705 - 1596577 + | putative DNA-binding transcriptional regulator TERM 1706 1597750 - 1597766 + G 73 -8.7 -3.79419 | opp_overlap 1597750 1597749 GCGGCAGTGATGAAT GCGGTTA TTT TGACCGC TGTTTTATCGGCGGG lysP 1596835 - 1598346 + | lysine transporter TERM 1707 1598396 - 1598377 - f 93 -12.2 -3.73072 | opp_overlap 1598377 AACGTGCGGATGAAA GGGCGATA ACGC TATCGCCC TTCTTTAGTGCCTAT TERM 1708 1598377 - 1598396 + F 100 -12.2 -4.01902 | opp_overlap 1598377 AACGTGCGGATGAAA GGGCGATA ACGC TATCGCCC TTCTTTAGTGCCTAT TERM 1709 1598426 - 1598465 + F 89 -11.6 -3.51924 | gap 1, opp_overlap 1598429 1598437 TAAATTAGCGGTAAC TGACGCCAATACCAGTACG AAA TGTGCTGGTATTAGCG-CA TTCTATCCGTGAACA TERM 1710 1598463 - 1598429 - f 91 -13.7 -2.53382 | opp_overlap 1598426, overlap 1598437 ATTAGCGGTAACTGA CGCCAATACCAGTAC GAAAT GTGCTGGTATTAGCG CATTCTATCCGTGAA TERM 1711 1598568 - 1598582 + F 70 -5.8 -4.26832 | overlap 1598563 TTATGGCAATCTTAT TGATAA GTA TTATCA TTTGCTTTATTGTTA YPTB1341 1598632 - 1599777 + | ABC type periplasmic iron siderophore/cobalamin binding protein TERM 1712 1600875 - 1600889 + G 83 -6.4 -4.8622 | overlap 1600876 CGCACGCATGATTTT TGGTGA AGA TCACCG TTTTTACTTACCAGC YPTB1342 1599976 - 1601058 + | iron ABC transporter permease YPTB1343 1601055 - 1601843 + | siderophore/cobalamin ABC transporter, ATP-binding subunit TERM 1713 1602969 - 1602986 + G 72 -5.7 -4.3534 | opp_overlap 1602957, overlap 1602957 TAATTATGCGGTTAC TCATAAT GGTT ATTATGA TTTTGGTAATTCAAC TERM 1714 1603446 - 1603432 - g 71 -7 -4.07568 | opp_overlap 1603432 1603432, overlap 1603433 TCTGGTGGGGGAAAA GGCGGG CTT CCCGCA CTTATTCTGGGTAAT TERM 1715 1603445 - 1603433 - g 72 -10.5 -3.04398 | opp_overlap 1603432 1603432, overlap 1603432 CTGGTGGGGGAAAAG GCGGG CTT CCCGC ACTTATTCTGGGTAA TERM 1716 1603536 - 1603548 + G 71 -9.1 -3.494 | opp_overlap 1603533, overlap 1603533 GGAAGGGATGAACGC CAGCG TGA CGCTG TTCTATACCGACTTC YPTB1344 1602103 - 1604100 + | putative outer membrane receptor YPTB1345 1604991 - 1604371 - | putative glutathione S-transferase-family protein YPTB1346 1605858 - 1605196 - | putative hydrolase TERM 1717 1605484 - 1605472 - G 75 -10.5 -3.37622 | AACACCGATTGATAA CGCCG TAT CGGCG GCAAAGTGTTTCGCG TERM 1718 1606767 - 1606736 - g 71 -7.2 -3.99324 | CCCCATTACCACAAA TCGCAGGCGCACCC AGTT GGACACGGCTGCAA GGCCCGAACCAATGG TERM 1719 1607234 - 1607259 + G 77 -10.5 -3.494 | TTTTAGGTGCGCGTT TGGATGCGGTG GTGC CACTGTATCCA TTATCTGCCGCATTG YPTB1347 1606345 - 1607412 + | putative iron/ascorbate oxidoreductase family protein YPTB1348 1607640 - 1608464 + | ABC transporter periplasmic substrate-binding protein TERM 1720 1608924 - 1608940 + G 73 -10.1 -3.15013 | opp_overlap 1608923, overlap 1608923 1608921 GGATCGCCAGAGCAT TGGCGGC TAA GCCGTCA TATCTGTTATCAGAT TERM 1721 1609364 - 1609389 + G 71 -9.1 -3.54307 | gap 1 CGCTTGCACGTTGAT TTCAAC-CGTCC AGA GGGCGGGTTGAA TTTAGCCGAAGTGTT YPTB1349 1608461 - 1609447 + | putative ABC transporter, ATP-binding subunit TERM 1722 1609646 - 1609658 + G 73 -5.5 -4.55625 | CACTGGTCAATGTGG GGCGT TCA ATGCC TTTTGTGGTGTTACT YPTB1350 1609444 - 1610115 + | putative ABC transport permease subunit TERM 1723 1611193 - 1611219 + G 87 -10.9 -4.08887 | opp_overlap 1611188 GGGGTATAATTTGGT CGCATCGGC GACAGATGG GCCGATGCG TTTGATTTCCGTGGT dacC 1610450 - 1611655 + | D-alanyl-D-alanine carboxypeptidase TERM 1724 1611842 - 1611823 - T 95 -9.3 -4.45693 | opp_overlap 1611823 TAACATAAATAGAAA GCGCGAT GTGACT ATCGCGC TTTTCAGGATGTTTC TERM 1725 1611823 - 1611842 + T 88 -10 -4.15543 | opp_overlap 1611823 TAACATAAATAGAAA GCGCGATG TGAC TATCGCGC TTTTCAGGATGTTTC TERM 1726 1612093 - 1612061 - T 90 -5.6 -5.54403 | gap 1, overlap 1612064 AAAAAAGAAGAAAAA TAACAGGCTGGCC GTGGAAGT GGCCAGCCTGG-A GCGGTTAATCAAACG TERM 1727 1612091 - 1612064 - T 100 -14.2 -4.74161 | overlap 1612061 AAAGAAGAAAAATAA CAGGCTGGCC GTGGAAGT GGCCAGCCTG GAGCGGTTAATCAAA sdaC 1613431 - 1612130 - | HAAAP family serine/H(+) symporter SdaC TERM 1728 1612314 - 1612328 + g 74 -10 -3.59979 | AATGTTTCGATCATC CCCAAG ATA CTTGGG TTTAAGGTCGCGACA TERM 1729 1612661 - 1612640 - G 79 -9.5 -3.82486 | opp_overlap 1612642 ACTGAAGACGAAGAA CATGACGGT GATA ACCATCATG ATGTGGGCAAAGCTC TERM 1730 1614372 - 1614359 - R 70 -3.9 -4.83615 | opp_overlap 1614359 GATTCTGTATAAAAA TAATC TATG GATTA TTTGCCAACATAGCG deoR 1615296 - 1614532 - | DNA-binding transcriptional repressor DeoR TERM 1731 1615385 - 1615358 - R 88 -9.2 -4.36554 | CAGTACGATAATAAA TAAGCCCGGT AATTGTGG ACCGGGCTCA GACTACTGACAAAAT deoC 1616198 - 1615527 - | deoxyribose-phosphate aldolase TERM 1732 1616430 - 1616406 - R 100 -15.1 -2.91264 | GGGCGCATGGAGAGA TTGCCGGTCAG AGA CTAACCGGCAA GTGTGAAGCGAATAC YPTB1355 1617061 - 1616456 - | undecaprenyl pyrophosphate phosphatase YPTB1356 1617876 - 1617061 - | hypothetical protein TERM 1733 1617167 - 1617179 + g 76 -9.1 -3.90744 | opp_overlap 1617167 TTATGAGTAAGAAAA TGCGC CCC GCGCA TTATTTGACCGAAAC TERM 1734 1617179 - 1617167 - G 100 -9.1 -4.73613 | opp_overlap 1617167 TTATGAGTAAGAAAA TGCGC CCC GCGCA TTATTTGACCGAAAC YPTB1357 1619897 - 1618209 - | hypothetical protein TERM 1735 1620266 - 1620250 - R 100 -12.3 -4.70887 | opp_overlap 1620250 CCAGCAATAAAGAAA GGGTGTC TTG GACACCC TTATCGGATAAATGC TERM 1736 1620250 - 1620266 + r 95 -12.3 -3.33492 | opp_overlap 1620250 CCAGCAATAAAGAAA GGGTGTC TTG GACACCC TTATCGGATAAATGC grxA 1620570 - 1620307 - | glutaredoxin 1 TERM 1737 1620406 - 1620419 + g 80 -4.5 -5.03314 | overlap 1620396 1620395 TGGCACGGTTTCAAC CGGTT TACC GACCG TTTTTTCCAGATCAG YPTB1359 1621033 - 1621347 + | hypothetical protein TERM 1738 1621396 - 1621370 - f 76 -9.5 -3.41013 | TAAGCACATTGAGAA TATCTAAGCCG AGGAA CGGCCCAGATA TCAAATTAGTCGGGA YPTB1360 1621489 - 1621974 + | hypothetical protein TERM 1739 1622089 - 1622125 + F 71 -5 -4.74013 | gap 1, opp_overlap 1622091 1622093 1622095, overlap 1622092 1622093 AAACGTGTCCGAATA AAGACAGTGTGCCGCAG ATAT CAGCGGCACGCGG-CTA TTTTCTCTATTTACG TERM 1740 1622092 - 1622123 + F 74 -7.8 -3.97364 | opp_overlap 1622091 1622093 1622095, overlap 1622089 1622093 CGTGTCCGAATAAAG ACAGTGTGCCGCAG ATAT CAGCGGCACGCGGC TATTTTCTCTATTTA TERM 1741 1622093 - 1622122 + F 83 -11.3 -2.96792 | opp_overlap 1622091 1622093 1622095, overlap 1622092 1622089 GTGTCCGAATAAAGA CAGTGTGCCGCAG ATAT CAGCGGCACGCGG CTATTTTCTCTATTT TERM 1742 1622122 - 1622093 - f 75 -9.1 -3.6761 | opp_overlap 1622093 1622092 1622089, overlap 1622091 1622095 GTGTCCGAATAAAGA CAGTGTGCCGCAG ATAT CAGCGGCACGCGG CTATTTTCTCTATTT TERM 1743 1622120 - 1622095 - f 80 -10.3 -3.41738 | opp_overlap 1622093 1622092 1622089, overlap 1622093 1622091 GTCCGAATAAAGACA GTGTGCCGCAG ATAT CAGCGGCACGC GGCTATTTTCTCTAT TERM 1744 1622869 - 1622856 - g 70 -2.3 -4.98857 | opp_overlap 1622857, overlap 1622857 ACCGAATGAGAAAAA TCTCG ACCC CGAGT TACTGGCGCTGGTCA TERM 1745 1623148 - 1623158 + G 71 -6.8 -4.25458 | opp_overlap 1623143 GCCGATTACACGGGC TCCG CGA CGGA TTTATTGCTGAAGTT TERM 1746 1623606 - 1623591 - g 71 -10.4 -2.75577 | overlap 1623588 1623587 GGATCCGAAAATTGA CCGGGT CATC ACCCGG GCCTGGACAAAAGTT potF 1622527 - 1623636 + | putrescine ABC transporter periplasmic substrate-binding protein potG 1623807 - 1624940 + | putrescine transporter ATP-binding subunit potH 1624965 - 1625930 + | putrescine ABC transporter membrane protein TERM 1747 1626785 - 1626808 + F 100 -15.4 -3.30124 | overlap 1626788 GTCTTTCGTCTCCTT TAACGCCGCT TTAG AGCGGCGTTA TTGTGAGAGATAACA TERM 1748 1626788 - 1626805 + F 100 -12.7 -3.7941 | overlap 1626785 TTTCGTCTCCTTTAA CGCCGCT TTAG AGCGGCG TTATTGTGAGAGATA YPTB1365 1626876 - 1627340 + | hypothetical protein TERM 1749 1627443 - 1627458 + G 82 -10.4 -3.83226 | opp_overlap 1627443 ATTGCGCACAGTATA CGGCAG GTCG CTGCCG TTCTTGTCAGTGGTT TERM 1750 1627458 - 1627443 - g 71 -10.4 -2.8547 | opp_overlap 1627443 ATTGCGCACAGTATA CGGCAG GTCG CTGCCG TTCTTGTCAGTGGTT TERM 1751 1628009 - 1627997 - g 74 -9.1 -3.67597 | opp_overlap 1628003, overlap 1628000 CCGCTGACCGAACAA CAGGC CCT GCCTG AGCGGTTTAATCAGG rumB 1627424 - 1628554 + | 23S rRNA methyluridine methyltransferase artJ 1629412 - 1628681 - | ABC transporter, periplasmic arginine binding protein artJ TERM 1752 1629812 - 1629828 + H 71 -6.7 -4.21974 | overlap 1629820 1629821 CTGGTATTAGCATGG TGATAAT TTT ATTATCA TTTGTTAAATGATAA YPTB1368 1630182 - 1631108 + | SPFH domain-containing protein TERM 1753 1631137 - 1631172 + F 100 -11.8 -5.35459 | opp_overlap 1631133 ATCAATAAATCTGAA GCCCACTTCCCCATGG AGAT TCGTGGTGTAGTGGGC TTTTTTATCATCTGT TERM 1754 1632433 - 1632420 - g 71 -4.5 -4.49556 | CCGCGATTAAACAAA CACGT TTTT ACGCG CTCTATCATGGCGGC TERM 1755 1632459 - 1632470 + G 71 -3 -4.89393 | GCGGCGTCCGCACGT TGTA CGAC TACA TTTTTGTGCAGTTTG YPTB1369 1631477 - 1632613 + | putative periplasmic iron/siderophore binding protein YPTB1370 1632613 - 1633671 + | putative FecCD ABC type transporter, permease protein TERM 1756 1634390 - 1634380 - g 71 -8.2 -3.70919 | TCGAAAGTGGAACAA GCCC TTT GGGC TATCGCTACTTATTG YPTB1371 1633668 - 1634453 + | putative iron ABC type transport, ATP-binding protein YPTB1372 1634450 - 1635238 + | hypothetical protein YPTB1373 1635231 - 1636601 + | hypothetical protein YPTB1374 1636598 - 1637443 + | drug/metabolite family efflux pump TERM 1757 1637606 - 1637572 - T 100 -12.2 -3.90112 | opp_overlap 1637571 1637570 GGGGCGTTAAGGAAA CCGGATCATCACGCAA TTT CTGGTTGATGATCCGG CGTTGTCGCATAAGG artM 1638319 - 1637651 - | arginine transporter permease subunit ArtM artQ 1639035 - 1638319 - | arginine transporter permease subunit ArtQ TERM 1758 1639016 - 1638981 - G 82 -10.4 -3.89346 | gap 1, opp_overlap 1638987, overlap 1638982 GTGCCAGTGCACAAA CGGCAAG-GCCGACGGT CAT ACCGGCGGCACTTGCTA AAGGTTGAAATTCAT TERM 1759 1639015 - 1638982 - G 78 -11.7 -2.93393 | gap 1, opp_overlap 1638987, overlap 1638981 TGCCAGTGCACAAAC GGCAAG-GCCGACGGT CAT ACCGGCGGCACTTGCT AAAGGTTGAAATTCA artI 1639778 - 1639047 - | ABC transporter, periplasmic arginine-binding protein artI artP 1640527 - 1639799 - | arginine transporter ATP-binding subunit TERM 1760 1640791 - 1640763 - R 78 -8.8 -3.89354 | TTTGTAAATCAATAA GTACCGGGCCAC GGGAA GGAACCCGGTAC GAAAGATGTGTGGCC YPTB1379 1641382 - 1640822 - | chorismate mutase YPTB1380 1642127 - 1641552 - | putative lipoprotein YPTB1381 1643231 - 1642224 - | hypothetical protein TERM 1761 1643038 - 1643048 + g 71 -6.8 -4.2349 | AGCGTATCGACATCC GCCA GCA TGGC TTTTGCCTGTGAGGA YPTB1382 1644821 - 1643331 - | hypothetical protein ltaA 1645837 - 1644818 - | L-threonine aldolase poxB 1647907 - 1646186 - | pyruvate dehydrogenase TERM 1762 1646378 - 1646363 - G 71 -9 -3.58343 | opp_overlap 1646356 GCCAGGATGTGCAAA GGCACT TTCC AGTGCC GCATTTAATTCAGAG hcr 1649073 - 1648051 - | HCP oxidoreductase, NADH-dependent TERM 1763 1648207 - 1648191 - G 70 -7.9 -3.94409 | TACATGAGCCACAAA CACCCGC GCG GCAGGCG GCCATAACCGGTATT TERM 1764 1649172 - 1649138 - R 76 -10 -3.39288 | overlap 1649126 1649136 CAGCGTGCAATAATA GCCCGGTCAACGGC GAGAAAG GCGATTGACCAGGC AAGGTATAATTAACT hcp 1650839 - 1649187 - | hydroxylamine reductase TERM 1765 1650645 - 1650633 - G 73 -3.3 -4.83615 | overlap 1650634 CAGCGTTGAGAAAAA TGCTC TGG GGGCA AAGCTGTCAATTTGG TERM 1766 1651009 - 1650997 - R 76 -6.9 -4.44548 | overlap 1650998 TATAGGGAAGGAAAA GCCCC CAG AGGGC GGGGGGGGGGCGACT YPTB1387 1651937 - 1651041 - | hypothetical protein TERM 1767 1652615 - 1652601 - g 78 -5.7 -4.72201 | opp_overlap 1652601 GTGGATAAAAAATAA CGATG GGTTA CATCG TATCTACTATCGAGT TERM 1768 1653139 - 1653127 - g 83 -9.1 -4.42238 | TTATTGCAAGCAAAA GGCTC ACT GAGCC TCGATCCTCATGCCC TERM 1769 1653702 - 1653719 + G 77 -2.6 -5.24129 | CCTAACAATTTTGCC TGCACC CGATAT GGAGCA TTTTTTATACCGCGC YPTB1388 1652290 - 1653957 + | hypothetical protein YPTB1389 1655041 - 1654094 - | putative virulence factor YPTB1390 1655275 - 1656390 + | macrolide transporter subunit MacA TERM 1770 1656625 - 1656649 + G 70 -2 -4.83677 | overlap 1656626 AGTTGGATGACGATG CGTTGGCGGC ACTGC GCCGTGAACA TTTTGGTTTTATTTT YPTB1391 1656390 - 1658339 + | macrolide transporter ATP-binding /permease protein TERM 1771 1658517 - 1658484 - T 100 -11.2 -4.63007 | opp_overlap 1658490, overlap 1658490 TAGAAGTAGATAAAA TAAAAATGCCAGTC GTCATT GACTGGCATTTTGA ATCAAAGTACAGGTA TERM 1772 1658490 - 1658511 + T 93 -10.9 -4.18494 | opp_overlap 1658484 1658490 TAGATAAAATAAAAA TGCCAGTCG TCAT TGACTGGCA TTTTGAATCAAAGTA TERM 1773 1658511 - 1658490 - T 100 -10.2 -5.58522 | opp_overlap 1658490, overlap 1658484 TAGATAAAATAAAAA TGCCAGTC GTCATT GACTGGCA TTTTGAATCAAAGTA cspD 1658883 - 1658620 - | cold shock-like protein TERM 1774 1658850 - 1658836 - G 80 -8.6 -4.44046 | opp_overlap 1658836 1658835 CTCAGGGCAAATAAA GCCAAA ACC TTTGGC GTTGTTGAACCATTT TERM 1775 1659322 - 1659299 - g 78 -6 -4.73432 | gap 1, opp_overlap 1659299 1659303 TCAAAGATAAACAAA TCG-AGGCGCT TCA ACCGCCTTCGA TGTATAAAGTGATAC clpS 1659244 - 1659564 + | ATP-dependent Clp protease adaptor protein ClpS TERM 1776 1659571 - 1659559 - f 71 -4.8 -4.58395 | TGTACGCTGGAAAAA GCCT GATTA AGGC AATTATTGGGAGGTG clpA 1659590 - 1661866 + | ATP-dependent Clp protease ATP-binding subunit TERM 1777 1661980 - 1662007 + T 100 -10.7 -5.06414 | gap 1, opp_overlap 1661980 ATCCAGTAAAATAAA GGGCGATA-GCT AAAAC AGCGTATCGCCC TTTTTATTGCCAACG TERM 1778 1662007 - 1661980 - T 100 -11.4 -4.7261 | gap 1, opp_overlap 1661980 ATCCAGTAAAATAAA GGGCGATA-GCTA AAA CAGCGTATCGCCC TTTTTATTGCCAACG TERM 1779 1662220 - 1662195 - T 100 -13.3 -4.36778 | overlap 1662189 AAAGATAACGCAAAA CGCCCTTGCCA TAAA TGGGAAGGGCG CCGGAGGGGGACTAC infA 1662497 - 1662279 - | translation initiation factor IF-1 aat 1663373 - 1662663 - | leucyl/phenylalanyl-tRNA--protein transferase cydC 1665316 - 1663592 - | cysteine/glutathione ABC transporter membrane/ATP-binding component cydD 1667103 - 1665319 - | cysteine/glutathione ABC transporter membrane/ATP-binding component TERM 1780 1665485 - 1665507 + g 74 -9 -3.72893 | AGCAGGGTAGACTGC GCACGGGAGG CCT CCTCCAGCGC TTTCATCACCAACTG TERM 1781 1666238 - 1666217 - G 79 -3.7 -5.19212 | gap 1, overlap 1666218 1666225 ATTAGCACCAAAAAA CCGGCA-AAC AGC GTTACGCCGA GGCCATAGCTACCAA TERM 1782 1667025 - 1667036 + g 88 -7.2 -5.04249 | overlap 1667016 GGCGGAGCCAACGTT GCGC GGGG GCGC TTTGTTTTTTCAGCC TERM 1783 1667486 - 1667462 - R 100 -9.2 -5.53079 | overlap 1667463 AAAACAGATAAAAAA GCGGGTGGCC CATGT AGCCACCCGT ATAGAACGAGGTGAA TERM 1784 1667485 - 1667463 - R 100 -12.7 -3.88187 | overlap 1667462 AAACAGATAAAAAAG CGGGTGGCC CATGT AGCCACCCG TATAGAACGAGGTGA trxB 1668506 - 1667544 - | thioredoxin reductase TERM 1785 1668593 - 1668573 - H 90 -4 -5.59357 | opp_overlap 1668573 ATGACATTAAAAAAA GCAAACAA AAATG TTGTTAGC AATTTTTTTGATAGG lrp 1669274 - 1669768 + | leucine-responsive transcriptional regulator TERM 1786 1669826 - 1669852 + F 100 -15.2 -3.14463 | opp_overlap 1669822, overlap 1669829 TTATTCATACAGTTT CAACGCCGGGGA GGC TTCTCGGCGTTG TTGCTCAGACCCGTT TERM 1787 1669829 - 1669849 + F 84 -11.1 -3.71848 | opp_overlap 1669822, overlap 1669826 TTCATACAGTTTCAA CGCCGGGGA GGC TTCTCGGCG TTGTTGCTCAGACCC TERM 1788 1670648 - 1670683 + G 71 -3.9 -4.77165 | TGGGGGCGGGTGTTG CGGCCTCATCGGCGT TAGCCC ATGGCGATGATGACG TTTTGTTCTCAGCCC TERM 1789 1671373 - 1671358 - g 70 -2.5 -4.87133 | opp_overlap 1671370, overlap 1671361 1671365 AGCTCCCAAATAAAA CAAGG TATTGG CCCTG AATTGCCACGGCCAA TERM 1790 1671392 - 1671361 - g 71 -5 -4.54026 | opp_overlap 1671370, overlap 1671358 1671365 TCCCAAATAAAACAA GGTATTGGCCCTGA ATTG CCACGGCCAAATCC GGTTCGTATTCCAAC TERM 1791 1671566 - 1671552 - g 70 -10 -3.15346 | opp_overlap 1671553 1671555 1671556, overlap 1671539 1671550 AACATCTGATGAAGA TGCTGC TTT GCAGCA GGCTATCTTGCGCAA TERM 1792 1671555 - 1671585 + G 71 -9.1 -3.57144 | gap 1, opp_overlap 1671552 1671550, overlap 1671553 1671556 ATCTGATGAAGATGC TGCTTTGCAGCAGG CTAT CTTGC-GCAAAGCG TTTGCCGATCAGCAA TERM 1793 1671876 - 1671895 + G 83 -10 -4.14004 | opp_overlap 1671872 AGTCGATGACAGCCC GCGTGAGC CTCT GTTCACGC TTTCTCCTTATGTTG ftsK 1669891 - 1673823 + | putative cell division protein lolA 1674015 - 1674623 + | outer-membrane lipoprotein carrier protein TERM 1794 1674681 - 1674698 + G 79 -10.5 -3.6715 | opp_overlap 1674679 TGAGTTTCAACCACT GGCCGCG CGTA TGCGGCC TTTGACGTTGGATCA TERM 1795 1675628 - 1675645 + G 74 -6.3 -4.44046 | CCGAAGGGGAGCGGG CGATTGC CCAG GCAATTG TTTATTTAGCCTGCG YPTB1403 1674634 - 1675977 + | recombination factor protein RarA TERM 1796 1675990 - 1675966 - f 93 -9.9 -4.39828 | opp_overlap 1675967 1675972 1675973 AATAGCCCGATAAAA CGCTACCGCTA GCT TTGCGGTTGCG GTAAGGTTAGCATTA TERM 1797 1676653 - 1676663 + G 71 -8.2 -3.71672 | opp_overlap 1676653 1676652 TTCTCTGGGCGAAAT GGCC GGT GGCC TTGATTTTGCTGCCG TERM 1798 1676729 - 1676717 - g 74 -9.1 -3.72576 | TTTGTGGTGATGAAA GGGCA AAT TGCCC GTATGCACCGTGCTC serS 1676219 - 1677511 + | seryl-tRNA synthetase TERM 1799 1677618 - 1677640 + F 95 -4.9 -5.76633 | gap 1, opp_overlap 1677622, overlap 1677622 GTTATCTGCTATTTC G-AAAGCGTC TACG GGCGCTTTTC TTTTTTTGTGTATCC TERM 1800 1677622 - 1677635 + F 95 -5.9 -5.61277 | opp_overlap 1677622, overlap 1677618 TCTGCTATTTCGAAA GCGTC TACG GGCGC TTTTCTTTTTTTGTG YPTB1405 1677806 - 1678954 + | MFS family transporter TERM 1801 1679034 - 1678996 - T 83 -11.2 -3.43033 | gap 3, opp_overlap 1678999 1678999, overlap 1678999 TATCAATATATAAGA CAAC-GCCGCCA-GC-GGA TTCA TCCAGCATGGCGGCAGTTG TTAGGCCAAACCTAA TERM 1802 1679030 - 1678999 - T 81 -9.5 -3.83668 | gap 2, opp_overlap 1678999 1678999, overlap 1678996 CAATATATAAGACAA CGCCGCCA-GC-GGA TTCA TCCAGCATGGCGGCA GTTGTTAGGCCAAAC pflA 1679842 - 1679108 - | pyruvate formate lyase-activating enzyme 1 YPTB1407 1680829 - 1681503 + | hypothetical protein TERM 1803 1681587 - 1681567 - T 100 -13.3 -4.3255 | opp_overlap 1681567 CTCTGAATGAATAAA GGCCCCACA ATA TGTGGAGCC TTTCATGTTGTAACA TERM 1804 1681567 - 1681587 + T 90 -11.1 -3.97088 | opp_overlap 1681567 CTCTGAATGAATAAA GGCCCCACA ATA TGTGGAGCC TTTCATGTTGTAACA pflB 1683903 - 1681621 - | formate acetyltransferase 1 TERM 1805 1683481 - 1683495 + g 77 -2.8 -5.1925 | overlap 1683489 GTTATGTGTTTTACG GTATTC GGT GAAGAC TTTTTTCAGTTGTGG focA 1684816 - 1683959 - | formate transporter YPTB1410 1687279 - 1685513 - | hypothetical protein TERM 1806 1686646 - 1686659 + g 81 -8.1 -4.62069 | GCAAGCTGATGGACT CCGCA ATAA TGCGG TTTTTCACATAACGC ansB 1687428 - 1688465 + | L-asparaginase II TERM 1807 1688540 - 1688510 - f 83 -11.2 -3.57144 | opp_overlap 1688510 CTTTTTATTTCTAAA TGAATACTACGTCC ATA GGGCGTGGTATTCA TTTAGAAATAAAAAT TERM 1808 1688510 - 1688540 + F 100 -15.6 -3.57263 | opp_overlap 1688510 CTTTTTATTTCTAAA TGAATACTACGTCC ATA GGGCGTGGTATTCA TTTAGAAATAAAAAT TERM 1809 1689138 - 1689113 - g 75 -6.1 -4.49958 | opp_overlap 1689115, overlap 1689116 ATCTGATGAAATAAA CATCGGTGATC GCCA GATAACCGGTG TTAAAGCGGGTGTTG TERM 1810 1689823 - 1689844 + G 81 -12.3 -3.0264 | overlap 1689842 GAGTCAATGTTTCTG CCGACACTG AAGG CGGTGTCGG TGTTGCAGCGGGTTT YPTB1412 1688784 - 1689878 + | hypothetical protein YPTB1413 1689878 - 1691746 + | hypothetical protein TERM 1811 1691862 - 1691848 - f 71 -8.6 -3.56568 | opp_overlap 1691848 CAAGCAGCGTTCAAA TCTGCT CCC AGCAGA TTTGTCACCCCAGTC TERM 1812 1691848 - 1691862 + F 75 -8.6 -3.86015 | opp_overlap 1691848 CAAGCAGCGTTCAAA TCTGCT CCC AGCAGA TTTGTCACCCCAGTC serC 1692113 - 1693198 + | phosphoserine aminotransferase aroA 1693376 - 1694662 + | 3-phosphoshikimate 1-carboxyvinyltransferase TERM 1813 1694918 - 1694950 + F 72 -10 -2.78679 | gap 1, overlap 1694898 1694917 AGCGTATAATGCTAC CTCTGTGTTTGCCCT GCCG GGGGCAGACA-AGAG ATTTGCCTACCGAAA TERM 1814 1695167 - 1695184 + G 74 -4.1 -4.86731 | ATTGGTACCACTTGC CGCACAT CTCG ATGTTCG TTTTGTTTCACAGAA cmk 1694976 - 1695668 + | cytidylate kinase rpsA 1695842 - 1697515 + | 30S ribosomal protein S1 ihfB 1697576 - 1697860 + | integration host factor subunit beta TERM 1815 1697906 - 1697925 + F 100 -7.1 -5.81412 | opp_overlap 1697906 AACGCTGATACGAAA CGGTGCC CTTATC GGCATCG TTTTTTTTGCGTAAA YPTB1419 1698393 - 1700684 + | hypothetical protein TERM 1816 1701266 - 1701282 + G 74 -6.5 -4.33274 | GTGTCTATTTCGATC CGTCTGG TAT CCAAACG TTTTCGTAATATCAG msbA 1700720 - 1702468 + | lipid transporter ATP-binding/permease protein TERM 1817 1702659 - 1702649 - g 71 -6.8 -4.19238 | opp_overlap 1702648 GGGGGAACGGTAAAA CACC GGT GGTG ATCTGGTTGGTTGAA lpxK 1702465 - 1703451 + | tetraacyldisaccharide 4'-kinase YPTB1422 1704904 - 1703459 - | hypothetical protein TERM 1818 1703493 - 1703524 + g 76 -11 -3.18681 | gap 1, overlap 1703498 1703499 AGTTTGAGGGCGGCT GCACATTCAGCAACG GAA CGTTGCTGGGT-TGC TTCGTAGAGTTGCAG TERM 1819 1703498 - 1703520 + g 75 -10.6 -3.40639 | overlap 1703493 1703499 GAGGGCGGCTGCACA TTCAGCAACG GAA CGTTGCTGGG TTGCTTCGTAGAGTT TERM 1820 1703499 - 1703519 + g 75 -11.9 -2.63901 | overlap 1703498 1703493 AGGGCGGCTGCACAT TCAGCAACG GAA CGTTGCTGG GTTGCTTCGTAGAGT TERM 1821 1705464 - 1705442 - H 74 -4.3 -4.93877 | gap 1 TCTCAGGAAATAAAA TGATTATGCA AGCG TGC-TAATCA TTCACCAAGATAGAC TERM 1822 1705507 - 1705492 - H 71 -4.6 -4.70046 | opp_overlap 1705493, overlap 1705493 GACAAAATTACAAAA CCCGCA ATTA TGCGGT TTTTTCATAAAATCA TERM 1823 1705493 - 1705506 + H 95 -8.1 -5.15634 | opp_overlap 1705493 1705492 ACAAAATTACAAAAC CCGCA ATTA TGCGG TTTTTTCATAAAATC cspB 1705623 - 1705832 + | cold shock-like protein TERM 1824 1705858 - 1705838 - f 100 -12.6 -3.90112 | opp_overlap 1705838 CGCTTTCTAAGCAAA CGGCTACC TCATC GGTAGCCG TTTCTCCCTTCTCGT TERM 1825 1705838 - 1705858 + F 100 -12.6 -4.00468 | opp_overlap 1705838 CGCTTTCTAAGCAAA CGGCTACC TCATC GGTAGCCG TTTCTCCCTTCTCGT YPTB1424 1706380 - 1706562 + | hypothetical protein kdsB 1706559 - 1707311 + | 3-deoxy-manno-octulosonate cytidylyltransferase TERM 1826 1707332 - 1707356 + F 100 -12.1 -4.15703 | opp_overlap 1707328 GCGACGGAAACTTTA CGCCAGAACCT ACC GGGCTCTGGCG TTGTTATTTCTAACC YPTB1426 1707674 - 1708567 + | hypothetical protein TERM 1827 1709676 - 1709662 - g 71 -4.2 -4.7373 | overlap 1709664 GCAGCTCACGAAAAA GGTGTG AGC CACAAC ATGCAATTTATACAA TERM 1828 1709765 - 1709797 + G 71 -4.2 -4.7373 | gap 1, opp_overlap 1709765 1709768, overlap 1709767 1709768 1709768 ATGCGGTATTAGAAT GGATT-GCTGAACCT CAGC AGGTTCTGCAAATAC TTTTTGATACGCTAA smtA 1709395 - 1710180 + | putative metallothionein SmtA mukF 1710177 - 1711499 + | condesin subunit F mukE 1711507 - 1712208 + | condesin subunit E TERM 1829 1712850 - 1712860 + G 71 -6.8 -4.20367 | overlap 1712849 AGCGCCATTACTCGC TCGC TAC GCGA TTATTTATTGCCAGA TERM 1830 1715599 - 1715585 - g 73 -8.5 -3.82603 | AATGGTGAAAGATAA CGGCG TTGAG CGCCG CTTGCACCGCCGTGA mukB 1712205 - 1716662 + | cell division protein MukB TERM 1831 1716707 - 1716726 + F 100 -7.1 -5.8096 | opp_overlap 1716707 ATTAGTTTTATTAAA TGGTCGC ACAGAA GCGGCCA TTTTTATTTTTTGTA TERM 1832 1718738 - 1718751 + G 73 -2.3 -5.08601 | opp_overlap 1718716 CTGGTGCACAAATCT CACAG CAGG CTGAG TTTTTATTGCAATAA YPTB1431 1716910 - 1718766 + | hypothetical protein YPTB1432 1718990 - 1719538 + | hypothetical protein YPTB1433 1719599 - 1720246 + | metallo-beta-lactamase superfamily protein TERM 1833 1720340 - 1720369 + T 74 -7.9 -3.94482 | opp_overlap 1720341 1720347, overlap 1720342 1720347 AGATGAATGTTTAAT AGCAAAAGATGCC GGAA GGCGTCTTTTGTG TTCTCTTTCGTTTAT TERM 1834 1720342 - 1720367 + T 100 -12.7 -3.53929 | opp_overlap 1720341 1720347, overlap 1720340 1720347 ATGAATGTTTAATAG CAAAAGATGCC GGAA GGCGTCTTTTG TGTTCTCTTTCGTTT TERM 1835 1720347 - 1720362 + T 82 -6.8 -4.80729 | opp_overlap 1720347 1720341, overlap 1720342 1720340 TGTTTAATAGCAAAA GATGCC GGAA GGCGTC TTTTGTGTTCTCTTT TERM 1836 1720419 - 1720450 + T 100 -14.6 -2.77013 | opp_overlap 1720426, overlap 1720426 GTCATCGAGTGACCA GTCAAAAGGATGGC TTGG GCCATCCTTTTGAG GTTATTGACAAAGTG TERM 1837 1720426 - 1720443 + T 100 -11.3 -4.24123 | opp_overlap 1720426, overlap 1720419 AGTGACCAGTCAAAA GGATGGC TTGG GCCATCC TTTTGAGGTTATTGA TERM 1838 1720443 - 1720426 - T 100 -11.3 -4.21462 | opp_overlap 1720419 1720426 AGTGACCAGTCAAAA GGATGGC TTGG GCCATCC TTTTGAGGTTATTGA TERM 1839 1720524 - 1720550 + T 72 -10.1 -2.88849 | gap 1, opp_overlap 1720513, overlap 1720519 1720525 ACATCCATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCTCTGCC TERM 1840 1720525 - 1720551 + T 84 -10.1 -3.82218 | gap 1, opp_overlap 1720513, overlap 1720519 1720524 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCTCTGCCT TERM 1841 1720615 - 1720632 + T 100 -11.3 -4.4767 | opp_overlap 1720618 TGTCAGCAGTCTGAA GGATGGC TTGG GCCATCC TTTTATGGTCAGTCA aspC 1721860 - 1720670 - | aromatic amino acid aminotransferase TERM 1842 1721443 - 1721456 + g 73 -2.3 -5.04325 | CCACTTCCAGCCCTG CGGCT TCGA AGACG TTTTTATGGTTTGGC TERM 1843 1722005 - 1721989 - R 73 -5.1 -4.62336 | overlap 1722000 1722001 ATCTGAGGTGAAAAA TCGGC AAAATAG GCCGA TAGACAGAGTAATCT TERM 1844 1722070 - 1722051 - R 100 -10 -5.48623 | opp_overlap 1722051 AAATAGAAACAAAAA GACAGAGC CGAG GCCCTGTC TTTTTTCAACTTAGG TERM 1845 1722051 - 1722070 + r 95 -7.8 -5.09426 | opp_overlap 1722051 AAATAGAAACAAAAA GACAGAGC CGAG GCCCTGTC TTTTTTCAACTTAGG YPTB1435 1723199 - 1722117 - | porin TERM 1846 1723463 - 1723433 - R 100 -9.8 -5.09426 | opp_overlap 1723436 1723441, overlap 1723434 1723436 1723441 TCGAATTTTAAAAAA TGATAAAAGCCAGC AGA GCTGGCTTTTATTT GTACAAATTGACGTT TERM 1847 1723462 - 1723434 - R 100 -13.3 -3.64933 | opp_overlap 1723436 1723441, overlap 1723433 1723436 1723441 CGAATTTTAAAAAAT GATAAAAGCCAGC AGA GCTGGCTTTTATT TGTACAAATTGACGT TERM 1848 1723460 - 1723436 - R 100 -15.9 -3.39328 | opp_overlap 1723436 1723441, overlap 1723434 1723433 1723441 AATTTTAAAAAATGA TAAAAGCCAGC AGA GCTGGCTTTTA TTTGTACAAATTGAC TERM 1849 1723436 - 1723460 + r 100 -15.9 -3.89614 | opp_overlap 1723436 1723434 1723433 1723441, overlap 1723441 AATTTTAAAAAATGA TAAAAGCCAGC AGA GCTGGCTTTTA TTTGTACAAATTGAC TERM 1850 1723455 - 1723441 - R 100 -11.4 -4.76171 | opp_overlap 1723436 1723441, overlap 1723436 1723434 1723433 TAAAAAATGATAAAA GCCAGC AGA GCTGGC TTTTATTTGTACAAA TERM 1851 1723441 - 1723455 + r 100 -11.4 -4.99043 | opp_overlap 1723441 1723436 1723434 1723433, overlap 1723436 TAAAAAATGATAAAA GCCAGC AGA GCTGGC TTTTATTTGTACAAA asnC 1724897 - 1723497 - | asparaginyl-tRNA synthetase pncB 1726616 - 1725411 - | nicotinate phosphoribosyltransferase TERM 1852 1725698 - 1725713 + g 85 -7.6 -4.77036 | CCAATACCTTTTTCA TTGGGT CAAT ACCCAA TTTTTCATAATGCGC TERM 1853 1727179 - 1727196 + H 93 -4.1 -5.76949 | TATTTGCCGGAGTCG CCTGGGT TCTC ATCTAGG TTTTTTTTACAACTG TERM 1854 1727445 - 1727432 - g 75 -3.7 -5.03314 | TGGATGCGCAAAAAA CGACG GTAA CGGCG GTCAGTAAAGTAAAA pepN 1727332 - 1729947 + | putative aminopeptidase N pyrD 1730592 - 1731602 + | dihydroorotate dehydrogenase 2 TERM 1855 1732059 - 1732074 + G 78 -7.6 -4.36914 | TCTTGAAACCACTCA TGCCAA AAAG TTGGCA TTTTGTACAGCAACC YPTB1440 1731785 - 1732336 + | hypothetical protein YPTB1441 1733474 - 1732362 - | putative iron-sulfur binding protein YPTB1442 1733574 - 1735694 + | 23S rRNA m(2)G2445 methyltransferase TERM 1856 1737476 - 1737496 + G 78 -9.1 -4.07568 | opp_overlap 1737459, overlap 1737480 AGCAAGTTACAGGCT GAAGTCAGT GAT ACTGATTTC TTTTCCCGCCCACAC TERM 1857 1737480 - 1737492 + G 77 -6.3 -4.64861 | overlap 1737476 AGTTACAGGCTGAAG TCAGT GAT ACTGA TTTCTTTTCCCGCCC uup 1735700 - 1737613 + | ABC transporter ATPase component pqiA 1737742 - 1739028 + | putative paraquat-inducible protein A pqiB 1739042 - 1740667 + | paraquat-inducible protein B YPTB1446 1740664 - 1741260 + | putative lipoprotein protein TERM 1858 1741284 - 1741325 + F 70 -5.9 -4.3851 | overlap 1741285 TCTAAATCAGTCTAA TCCTCTTTCTCTGGTAATA ATCA TCTTGTCAGGGGAAGGGGG TTTCTATTTAATATC YPTB1447 1741309 - 1741449 + | hypothetical protein rmf 1741530 - 1741697 + | putative ribosome modulation factor TERM 1859 1741725 - 1741743 + T 100 -11.7 -4.67942 | opp_overlap 1741720 1741719 CATTATCAAGGGTAA CCTCCGC ATTAG GCGGAGG TTTTCATTTATTGCG fabF2 1743033 - 1741759 - | 3-oxoacyl-(acyl carrier protein) synthase II TERM 1860 1742582 - 1742570 - G 71 -9.1 -3.61232 | opp_overlap 1742568, overlap 1742568 TGTTTGATAGAAACA TGGCC AGC GGCCA AATTCACTAAGAATG TERM 1861 1743709 - 1743673 - R 79 -6.8 -4.69664 | gap 1, opp_overlap 1743676 1743679, overlap 1743676 TATATCACGTAAAAA CAATAAGGCG-ACATGA TTAA TCATATTCGCCTTATTT TACAATGCATTGACT TERM 1862 1743706 - 1743676 - R 87 -8.5 -4.4521 | gap 1, opp_overlap 1743676 1743679, overlap 1743673 ATCACGTAAAAACAA TAAGGCG-ACATGA TTAA TCATATTCGCCTTA TTTTACAATGCATTG fabA 1744251 - 1743733 - | 3-hydroxydecanoyl-(acyl carrier protein) dehydratase YPTB1451 1746092 - 1744320 - | putative Lon protease TERM 1863 1745293 - 1745304 + g 75 -5.8 -4.65916 | opp_overlap 1745292 1745293 GCATCGGCAGATAAG GCAG GGAG CTGC TTTTGTTGCAATAGG TERM 1864 1746357 - 1746345 - g 80 -4.8 -5.0133 | TATTTGGTCAAAAAA CACC GTGAA GGTG AAGCCATTACCCGCC YPTB1452 1746282 - 1746737 + | hypothetical protein TERM 1865 1746805 - 1746821 + T 100 -10.8 -4.56597 | opp_overlap 1746805 ACAGGATAAAAAAAA CCCCGC ATAGC GCGGGG TTTTTCACGAAAGAA TERM 1866 1746821 - 1746805 - T 100 -11.5 -6.00086 | opp_overlap 1746805 ACAGGATAAAAAAAA CCCCGCA TAG CGCGGGG TTTTTCACGAAAGAA ompA 1747904 - 1746843 - | outer membrane protein A TERM 1867 1747954 - 1747978 + r 71 -5 -4.62336 | CTTTAAAAGCTAAGC CCTTGGTTAA AATTC TTCGCCAAGG TTTTTACGCTCCCGT sulA 1748768 - 1748262 - | SOS cell division inhibitor TERM 1868 1748897 - 1748916 + H 75 -5.8 -4.68506 | CATTTTATGTTTGGC TACGTAAT CCAT ATTGCGTA TTTTTGCAATTAGTT YPTB1455 1748997 - 1749632 + | hypothetical protein TERM 1869 1749706 - 1749724 + T 84 -11.7 -3.09933 | opp_overlap 1749705 1749706 ATGAAACCGTATAAT GGGCCAC GATGG GTGGCCC TTGGGTACCTTAGGC TERM 1870 1749724 - 1749706 - T 80 -11.7 -2.63747 | opp_overlap 1749706, overlap 1749705 ATGAAACCGTATAAT GGGCCAC GATGG GTGGCCC TTGGGTACCTTAGGC YPTB1456 1751872 - 1749734 - | putative efflux transporter (PET) family TERM 1871 1750035 - 1750062 + g 71 -4 -4.66388 | opp_overlap 1750039, overlap 1750039 1750043 ATGGTGTGGTTCAGG CAAAGTAAGCGG AATG CCGCTTCCTGAG TTTCTTTATCGTTTT TERM 1872 1750469 - 1750447 - G 73 -7.1 -4.19369 | gap 1, opp_overlap 1750450 ACGCAAAAAACAGAA CACCACTGAT CACA ATCAG-GGTG AGTTGCCCCTCAAGA YPTB1457 1752348 - 1751902 - | hypothetical protein TERM 1873 1752390 - 1752380 - H 71 -2.4 -5.08824 | opp_overlap 1752389 CGTTGAGTGAAAAAA CCGC AAT GTGG CTGAGCGATAGCCTA helD 1752542 - 1754596 + | DNA helicase IV TERM 1874 1754623 - 1754652 + T 86 -11.5 -3.29187 | gap 1, opp_overlap 1754628, overlap 1754628 1754647 AAGCGATGCTCAATA CTAAACCCGGTGGT TGA ACCACCGGGTG-AG TTACCTATTTTAGGT TERM 1875 1754628 - 1754648 + T 100 -16.9 -2.58183 | opp_overlap 1754628, overlap 1754623 1754647 ATGCTCAATACTAAA CCCGGTGGT TGA ACCACCGGG TGAGTTACCTATTTT TERM 1876 1754648 - 1754628 - T 100 -16.9 -3.92592 | opp_overlap 1754628 1754623 1754647 ATGCTCAATACTAAA CCCGGTGGT TGA ACCACCGGG TGAGTTACCTATTTT mgsA 1755121 - 1754657 - | methylglyoxal synthase YPTB1460 1755980 - 1755300 - | hypothetical protein YPTB1461 1756296 - 1756712 + | hypothetical protein TERM 1877 1756777 - 1756747 - T 100 -9.7 -5.00616 | overlap 1756748 GGGCTTTCTAAAAAA GCACCCTGTCAGC GTGCT GCTCACAGGGTGG CGAACCTGGCAATCA TERM 1878 1756776 - 1756748 - T 100 -13.2 -3.60048 | overlap 1756747 GGCTTTCTAAAAAAG CACCCTGTCAGC GTGCT GCTCACAGGGTG GCGAACCTGGCAATC YPTB1462 1757162 - 1756821 - | hypothetical protein YPTB1463 1758389 - 1757199 - | hypothetical protein TERM 1879 1757273 - 1757248 - G 75 -10.5 -3.2964 | gap 1, opp_overlap 1757264 AAACCTTCTGGATAA GCCGC-GATCAC TGG GTGATCCGCAGC TTGGCGGAACTGCTC TERM 1880 1758639 - 1758618 - g 73 -9.5 -3.33162 | gap 1 GATGGTAGCGTAGAA GTGG-TTGCC AGC GGCAATCCAC AAGCAGTTGAACGTC YPTB1464 1758483 - 1758761 + | putative acylphosphatase YPTB1465 1759139 - 1758813 - | putative sulfite reductase subunit protein TERM 1881 1760365 - 1760377 + r 82 -2 -5.65177 | opp_overlap 1760365 TATATATCCAATATA TACT CACGA AGTA TTTTTTTATGGATAT TERM 1882 1762460 - 1762404 - R 73 -8.89999 -3.55304 | gap 3, opp_overlap 1762405, overlap 1762411 1762412 ATATCTAACAAGCAA TTATCAAGTTCGCCTTATCTCCCCGTCC TTCA GGGCGGGGAGATAAGGCG--CT-GAGAT TCCATTTAGTTGTTC TERM 1883 1762405 - 1762459 + r 100 -14.6 -3.35072 | gap 3, opp_overlap 1762404 1762411 1762412 TATCTAACAAGCAAT TATCAAGTTCGCCTTATCTCCCCGTCC TTCA GGGCGGGGAGATAAGGCG--CT-GAGA TTCCATTTAGTTGTT TERM 1884 1762454 - 1762411 - R 100 -16.9 -3.30956 | gap 2, opp_overlap 1762405, overlap 1762404 1762412 ACAAGCAATTATCAA GTTCGCCTTATCTCCCCGTCC TTCA GGGCGGGGAGATAAGGCG--C TGAGATTCCATTTAG TERM 1885 1762455 - 1762412 - R 100 -19.6 -2.5785 | opp_overlap 1762405, overlap 1762411 1762404 CAAGCAATTATCAAG TTCGCCTTATCTCCCCGTCC TTCA GGGCGGGGAGATAAGGCGCT GAGATTCCATTTAGT YPTB1469 1764883 - 1762466 - | putative oxidoreductase YPTB1470 1765783 - 1765037 - | putative short chain dehydrogenase TERM 1886 1765280 - 1765290 + g 71 -6.8 -4.28548 | AGTAGTCGCAACCTC CAGC GCT GCTG TTTTGGTCAATCCCT YPTB1471 1766412 - 1766732 + | hypothetical protein YPTB1472 1767062 - 1767520 + | putative (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydrase TERM 1887 1767732 - 1767750 + G 73 -5.2 -4.56597 | ATTCCCGATATAGTT CTTTCCCG TGC CGAGAAGG TTTTTAAACAGACGA YPTB1473 1767510 - 1768793 + | putative beta-ketoacyl-[acyl-carrier-protein] synthase TERM 1888 1768788 - 1768801 + G 73 -2.4 -5.07486 | TTTAGTCGATATCAT GGTT AACATG AACC TTTTTATTAGCGGTG YPTB1474 1768786 - 1769532 + | putative beta-ketoacyl-[acyl-carrier-protein] reductase TERM 1889 1770410 - 1770398 - g 77 -4.1 -5.03715 | opp_overlap 1770398 ATTACGCGCAAAAAA TAGGC GCG ACCTA TTGTGGCAGCATTTT YPTB1475 1769548 - 1770786 + | putative hydroxymethylglutaryl-coenzyme A synthase TERM 1890 1771064 - 1771074 + G 73 -3.2 -4.87592 | GGGCTTGCCTTACTG TCGG TTG TCGA TTTTATTCTGTCTAG YPTB1476 1770779 - 1771498 + | putative enoyl-CoA hydratase YPTB1477 1771491 - 1772252 + | polyketide biosynthesis enoyl-CoA hydratase YPTB1478 1772255 - 1773043 + | putative 3-oxoacyl-acyl carrier protein reductase YPTB1479 1773130 - 1773570 + | hypothetical protein YPTB1480 1773608 - 1773856 + | putative acyl carrier protein TERM 1891 1774221 - 1774233 + G 70 -7.7 -3.79668 | ATTTTTAGCGGGTCA TTCGC TTG GCGAA TTTAATGCATTACAT YPTB1481 1773955 - 1774803 + | putative acyl transferase YPTB1482 1774960 - 1775127 + | hypothetical protein TERM 1892 1775377 - 1775352 - f 82 -4.8 -5.41143 | opp_overlap 1775354, overlap 1775354 CATTTCTGAAAAAAA TATTTGTAGG CGAATT CCTACAAATC ACTTCCCAAATTCCT TERM 1893 1775375 - 1775354 - f 75 -7.4 -4.34482 | opp_overlap 1775354, overlap 1775352 TTTCTGAAAAAAATA TTTGTAGG CGAATT CCTACAAA TCACTTCCCAAATTC YPTB1483 1775792 - 1776292 + | hypothetical protein TERM 1894 1776380 - 1776358 - g 74 -6.3 -4.34402 | gap 1, overlap 1776359 GTCTGTACAGGAAAA CCGTGCGCAG GGTA CTGCG-ACGA CCGTATTAAAGAATA YPTB1484 1776335 - 1777885 + | hypothetical protein YPTB1485 1777897 - 1779249 + | hypothetical protein TERM 1895 1779536 - 1779553 + G 74 -2.6 -5.09225 | overlap 1779538 1779539 CTTCGTGTGGTGCCA TTCGCC CTTACA GGCGCA TTTTTTCAATACCCT YPTB1486 1779246 - 1779932 + | hypothetical protein TERM 1896 1781019 - 1781049 + G 77 -10.4 -3.61398 | GGGTGGCCTTTGATA TCCGTCAGTACCAC AGC GTGGCGATGACGGA TTATTCCCCGAAAGC YPTB1487 1779932 - 1781668 + | OmpA family outer membrane protein YPTB1488 1781672 - 1782163 + | hypothetical protein TERM 1897 1782369 - 1782388 + F 100 -9.2 -5.72118 | opp_overlap 1782367, overlap 1782370 ACGTTGTCATCAACC TCAGGCGG TTCG CCGCCTGC TTTTTTGTGTTTTTT TERM 1898 1782370 - 1782387 + F 100 -12.7 -3.9778 | opp_overlap 1782367, overlap 1782369 CGTTGTCATCAACCT CAGGCGG TTCG CCGCCTG CTTTTTTGTGTTTTT TERM 1899 1783284 - 1783261 - g 72 -6 -4.40561 | CCGCCGTAAAAATAA CCCGATTC TGGTCGGT GAACCGGG TGTGGGTAAAACCGC clpB3 1782551 - 1785199 + | Clp ATPase YPTB1490 1785196 - 1787694 + | hypothetical protein TERM 1900 1788718 - 1788708 - g 74 -4 -5.00616 | TGTTGGTGCAAAAAA TACT TTT AGTA ACATTAGCCTCTCTC YPTB1491 1787812 - 1789083 + | hypothetical protein TERM 1901 1789223 - 1789198 - g 74 -11.3 -2.75481 | overlap 1789203 1789219 1789220 GCCGAAGTTGAACCA CCTAACTTACC TGAA GGTAAATTAGG GCAACCCTACTACGC YPTB1492 1789090 - 1789482 + | putative lipoprotein YPTB1493 1789798 - 1792500 + | hypothetical protein YPTB1494 1792503 - 1792919 + | hypothetical protein TERM 1902 1793931 - 1793917 - g 75 -5.7 -4.63218 | GCCTTGGGAAGAAAA GGGAA TGTCG TTCCC AGTACCTCCATATCC YPTB1495 1792928 - 1794676 + | LysM domain-containing protein YPTB1496 1794681 - 1795193 + | hypothetical protein TERM 1903 1796133 - 1796150 + F 93 -9.1 -4.44915 | AGTTCTGGTGGTTTG CCATCGG TATC CCGGTGG TTTTCTGGCTGGTTC YPTB1497 1796147 - 1797205 + | hypothetical protein TERM 1904 1798685 - 1798673 - g 72 -10.5 -3.01791 | AGCTGCCCGCCAACA GCCCG CAA CGGGC AGCACGGGCAAAAAC TERM 1905 1798739 - 1798700 - g 71 -5 -4.60487 | CAGCACGGGCAAAAA CAGGCTATGACCAGTTAA AGGC TTATCTGATGATGGCCCG CCCGGAAAAAGCCGA TERM 1906 1799156 - 1799141 - g 75 -6 -4.61199 | overlap 1799143 AGGCGATAGATAAAA CGGTGG CCTC CCGCCG CGAAGAAATTGACTG TERM 1907 1799601 - 1799580 - g 74 -6.5 -4.42653 | overlap 1799583 AGGCGATGCACAAAA CAGGCTGTC GTCG GACAGCTCG CTGAGCCTGCAAACG YPTB1498 1797202 - 1800624 + | hypothetical protein TERM 1908 1801407 - 1801389 - g 74 -6.6 -4.371 | opp_overlap 1801400, overlap 1801383 1801400 1801402 TCGATCAGACCAAAA CGCTGGCA AAA TACCTGCG CAACCAGCCGCAGGG TERM 1909 1801528 - 1801502 - g 75 -11.4 -2.54523 | TTAGATGTGAACGGA CGGACCCGGCTG GTA CCGCCGCGCCCG GAATATCGCGTACAA YPTB1499 1800668 - 1802269 + | hypothetical protein YPTB1500 1802287 - 1803345 + | hypothetical protein TERM 1910 1803686 - 1803702 + G 71 -6.5 -4.254 | overlap 1803697 ACAAGCATTTATGCT CACCAGA GCC TCTGGAG TTTGTTCAGTATTGA YPTB1501 1803345 - 1803815 + | hypothetical protein TERM 1911 1804741 - 1804718 - gf 83 -11.8 -2.82516 | gap 1, opp_overlap 1804716 1804711 1804720, overlap 1804720 TCGGGGAGCAGGATA CACTGT-GGCC GAA GGCCGACAGTG CGTTCAGTGGTTATC YPTB1502 1804036 - 1805799 + | hypothetical protein YPTB1503 1805763 - 1806848 + | hypothetical protein YPTB1504 1806724 - 1807425 + | hypothetical protein YPTB1505 1807425 - 1807877 + | hypothetical protein TERM 1912 1808008 - 1807992 - g 71 -5 -4.56702 | opp_overlap 1807998 1808000, overlap 1807994 GGTGAATTAAATAAA CTGGCC CACCC GGCCCG CCCGGATGTTGACTG TERM 1913 1808541 - 1808556 + G 80 -9 -4.19817 | AGCGAACCGGCCCCG CCACCT GTTC AGGTGG TTTTACCTGCCTCAC YPTB1506 1807902 - 1809269 + | hypothetical protein TERM 1914 1809422 - 1809373 - T 81 -10.8 -3.27923 | gap 1, opp_overlap 1809378, overlap 1809377 1809382 TTTGAATATTATTAA TTAATGATAGCGCTCACAGCGGG GTGAT CCTGCTG-GAGCGCGACCTTTAA ACTGTATTAACACCA TERM 1915 1809378 - 1809417 + T 90 -11.4 -3.66883 | gap 1, opp_overlap 1809377 1809373 1809382 ATATTATTAATTAAT GATAGCGCTCACAGCGGGG TGA TCCTGCTG-GAGCGCGACC TTTAAACTGTATTAA TERM 1916 1809413 - 1809382 - T 93 -12.3 -2.97613 | gap 1, opp_overlap 1809378, overlap 1809377 1809373 TATTAATTAATGATA GCGCTCACAGCGGG GTGAT CCTGCTG-GAGCGC GACCTTTAAACTGTA YPTB1507 1810104 - 1809481 - | hypothetical protein TERM 1917 1809916 - 1809901 - G 79 -3.2 -5.18371 | TTCGACAAAATAAAA CTCAGC TGTT GTTGAG GCGTTATAGCGTTCT TERM 1918 1809984 - 1809994 + g 100 -4 -6.07969 | overlap 1809971 TATGTTGGGTCTCAG CATT TAT AATG TTTTTTTTGATTTTC TERM 1919 1810582 - 1810608 + H 73 -3.6 -5.02502 | TATATAGGTAAAACG TCGTGTCTGCGA GCT TTGATGGCACGA TTTTTCTGTCATGTC ybiT 1810619 - 1812382 + | ABC transporter ATP-binding protein TERM 1920 1812426 - 1812408 - f 100 -8.8 -5.8187 | opp_overlap 1812408 GACCTAACAAAAAAA GCTGATGC TAT GCGTCAGC TTTTTTTATGTCTTC TERM 1921 1812408 - 1812426 + F 100 -11 -5.80248 | opp_overlap 1812408 GACCTAACAAAAAAA GCTGATGC TAT GCGTCAGC TTTTTTTATGTCTTC YPTB1509 1812610 - 1813257 + | hypothetical protein moeB 1814099 - 1813329 - | molybdopterin biosynthesis protein MoeB cspD 1815375 - 1814101 - | molybdopterin biosynthesis protein MoeA TERM 1922 1815529 - 1815554 + r 86 -9.1 -4.34345 | overlap 1815530 AAAAATGAGATGGCT TGATACTGCTT TTAC GAGCAGTATCG TTTTCATCGTATATA TERM 1923 1815530 - 1815553 + r 77 -10.4 -3.19884 | overlap 1815529 AAAATGAGATGGCTT GATACTGCTT TTAC GAGCAGTATC GTTTTCATCGTATAT TERM 1924 1815915 - 1815886 - R 72 -9.3 -3.11687 | opp_overlap 1815884 TGAATCATGAGGCAA CGTTGACGCCATA ATGA TGTGGCTTCAACG AATATCTGCCAGATA YPTB1512 1817220 - 1815910 - | putative heme-binding protein YPTB1513 1817898 - 1817230 - | ABC transporter ATP-binding protein YPTB1514 1819162 - 1817900 - | hypothetical protein YPTB1515 1821524 - 1819164 - | hypothetical protein TERM 1925 1819864 - 1819878 + g 78 -5.8 -4.76041 | opp_overlap 1819864 TTTGTCACTATAGCA TGATAA GTA TTATCA TTTTTACTGGGTGTA TERM 1926 1820143 - 1820162 + g 78 -5.8 -4.72272 | AATTCATCGCTTAGT GGAAATGT CACG ACATTTTC TTTTTCATAACCAAA TERM 1927 1820551 - 1820541 - G 75 -5.4 -4.72272 | TGTTGCGATGAAAAA TGAC TCT GTCA GTAATTGATAATTAG TERM 1928 1821254 - 1821264 + g 100 -5.4 -5.81622 | GTAAAGCGTAGGCGA CATC TTT GATG TTTTTTTCATTTTGT TERM 1929 1821647 - 1821665 + r 71 -4.6 -4.58698 | CCAACTCCATGCCGT TATCTTAC TGT GTAGGGTA TTATTTTTAATTTCG TERM 1930 1822037 - 1822024 - R 95 -8.1 -5.10461 | opp_overlap 1822020 TCTATCGAATAAAAA GCCCT CGAA AGGGC TTGGGGTTTTATGTG YPTB1516 1822919 - 1822077 - | putative esterase TERM 1931 1822877 - 1822838 - G 78 -12 -2.6252 | opp_overlap 1822838, overlap 1822834 1822835 TCATATGACAATTCA GGCTGCTGGCAGCATGGC GGTA GCGCTGTTGCCAGCCGCC AAACATCCGATGCTC YPTB1517 1824079 - 1822940 - | alcohol dehydrogenase/formaldehyde dehydrogenase TERM 1932 1823966 - 1823956 - G 73 -8.2 -3.87815 | overlap 1823940 CGTCAGTGTGACAAA CGCC ACT GGCG ACAATCCGCACTAAC YPTB1518 1825221 - 1824352 - | LysR family transcriptional regulator TERM 1933 1825732 - 1825772 + G 79 -11.7 -3.19824 | overlap 1825726 1825731 1825731 1825733 GCACATTTTGGCCGT CCGGCGCTCAGTGCGGC CGTATTT GCCGGGCCGGGTGCCGG TATATTCATTAGTGG YPTB1519 1825357 - 1826508 + | major facilitator transporter TERM 1934 1826630 - 1826602 - f 93 -13.3 -2.84 | opp_overlap 1826625, overlap 1826599 ATCACTGGATAATCA TTTCGCTCTCAAT TAG AGTGAGAGCGAAA TTCGGGTGTGACCCG folE 1826650 - 1827354 + | GTP cyclohydrolase I TERM 1935 1827809 - 1827823 + G 73 -10 -3.30418 | overlap 1827807 1827806 CAGCCAGCTTATTAC GTACCG GCG CGGTAC TCTATTTGATCGGTG TERM 1936 1828187 - 1828199 + G 80 -4.7 -5.14965 | overlap 1828188 ATGTCGGTTGGGATT ACCGC TGG GCGGG TTTTTTGCTACAAGT TERM 1937 1828188 - 1828198 + G 71 -8.2 -3.68256 | overlap 1828187 TGTCGGTTGGGATTA CCGC TGG GCGG GTTTTTTGCTACAAG yeiB 1827400 - 1828575 + | hypothetical protein TERM 1938 1829907 - 1829896 - g 70 -2.2 -4.86621 | ACCCTGAATGAAAAA GGCT TGCC AACC CAACAATTGCAGTTA TERM 1939 1830279 - 1830257 - g 75 -3.4 -5.14698 | opp_overlap 1830258, overlap 1830258 AAATTGAAAACAAAA TCGTACGTAT TCC ATACGTAGGT GTTGATAAAGATAAT mglB 1829323 - 1830315 + | ABC transporter, perplasmic galactose-binding protein TERM 1940 1830806 - 1830786 - g 71 -6.9 -4.30448 | overlap 1830779 AAATTGAATTTAAAA GTTCTAAAG AAG CATTAGAAC AGGGTGTTTCGATGG TERM 1941 1830868 - 1830897 + G 85 -2.8 -5.64274 | opp_overlap 1830865 1830868 1830870, overlap 1830870 TACAGTAATGGACAA CATGTGGTTGGG GCGCTA TCCAACCAAAGG TTTTTTTGTCGATCA mglA 1830545 - 1832065 + | galactose/methyl galaxtoside transporter ATP-binding protein mglC 1832086 - 1833096 + | beta-methylgalactoside transporter inner membrane component TERM 1942 1833278 - 1833252 - T 100 -13.1 -4.68846 | gap 1, opp_overlap 1833247 AGGAATAAAGTAAAA GCCAGTCAGGGC GATA GCCCT-ACTGGC TGAAGTTAATGACAA sanA 1834278 - 1833541 - | hypothetical protein TERM 1943 1833688 - 1833676 - G 71 -6.9 -4.26871 | CAATGGACCAAGAAA GCGAG GTT CCCGC TTAAGAATATAGAGG TERM 1944 1834444 - 1834455 + r 71 -3 -5.06816 | CGCATGTGCTTTGGG GTTA CAAG TAAC TTTTTGTTCAACGCT TERM 1945 1834525 - 1834552 + r 73 -8.3 -3.65812 | overlap 1834526 GATAGCATCTGAGTA CCCGGCCTGCG GTATAG CACAGGCCGGA TTATATTCAAAACGA TERM 1946 1834526 - 1834551 + r 83 -11.8 -2.79273 | overlap 1834525 ATAGCATCTGAGTAC CCGGCCTGCG GTATAG CACAGGCCGG ATTATATTCAAAACG sfcA 1836256 - 1834559 - | malate dehydrogenase TERM 1947 1835165 - 1835181 + g 76 -2.2 -5.25803 | ATTGTGCAGATTCCA GTGGTG TAGGT CGTCAC TTTTTTGTACCAATT cdd 1837496 - 1836612 - | cytidine deaminase TERM 1948 1837811 - 1837787 - R 71 -9.3 -2.98729 | overlap 1837767 GATAAGGATTACAGA CCCTGACGT CGCTATC ACGCCAGGG GAAAGTGGGTTCAAC yohK 1838517 - 1837822 - | hypothetical protein TERM 1949 1838080 - 1838064 - G 80 -7.3 -4.62904 | AAATACCGGCAAAAA TAACGCA AAC TGCGCTA ATAGCGGGTAAACCA yohJ 1838921 - 1838514 - | hypothetical protein TERM 1950 1838899 - 1838881 - G 71 -8.8 -3.6512 | TAAATAATGGTGAAA GCTCGCAG GTA CTGCCAGC AAAGTGACATCATAT YPTB1530 1840344 - 1839163 - | putative MFS multidrug efflux pump TERM 1951 1839422 - 1839411 - G 75 -5.8 -4.5442 | CGCCCAATGAGAAAA TGGC CATT GCCA GCATCCATAACGGAA TERM 1952 1840321 - 1840347 + g 73 -2.2 -5.16681 | opp_overlap 1840300, overlap 1840326 AATCAGCAGATTGGT TACGCGCGATGA GAA TCTTTGCATGTA TTTTCTTATTTTTAG TERM 1953 1840500 - 1840527 + r 93 -9.8 -4.39226 | opp_overlap 1840502, overlap 1840497 1840502 GAAAATTTTTGCAGG AAGCAGTTCGGC CAGA GCCGATCTGCTA TTATTTTCTAGTTAT TERM 1954 1840525 - 1840502 - R 93 -12.4 -3.1506 | opp_overlap 1840500 1840497 1840502 AAATTTTTGCAGGAA GCAGTTCGGC CAGA GCCGATCTGC TATTATTTTCTAGTT TERM 1955 1840502 - 1840525 + r 100 -12.4 -3.78091 | opp_overlap 1840502, overlap 1840500 1840497 AAATTTTTGCAGGAA GCAGTTCGGC CAGA GCCGATCTGC TATTATTTTCTAGTT YPTB1531 1841948 - 1840695 - | hypothetical protein TERM 1956 1841755 - 1841769 + g 90 -9.2 -4.63184 | opp_overlap 1841755 GGCGCAGCGATGAAA CCTGCG GGA CGCGGG TTTTTGGCATCCCTT TERM 1957 1841914 - 1841894 - G 76 -11.1 -3.15544 | opp_overlap 1841895 1841897, overlap 1841897 GGTCACTGTGACCAA TCAGCCGCA TAT TGCGGCTGT ATTCAGGTATCGGCA TERM 1958 1841895 - 1841913 + g 91 -14.6 -3.07962 | opp_overlap 1841894 1841897, overlap 1841897 GTCACTGTGACCAAT CAGCCGCA TAT TGCGGCTG TATTCAGGTATCGGC TERM 1959 1841911 - 1841897 - G 76 -11.4 -2.78216 | opp_overlap 1841895 1841897, overlap 1841894 CACTGTGACCAATCA GCCGCA TAT TGCGGC TGTATTCAGGTATCG TERM 1960 1841897 - 1841911 + g 79 -11.4 -3.09785 | opp_overlap 1841897 1841894, overlap 1841895 CACTGTGACCAATCA GCCGCA TAT TGCGGC TGTATTCAGGTATCG YPTB1532 1843042 - 1841966 - | putative sugar ABC transporter TERM 1961 1843678 - 1843688 + G 89 -3.2 -5.61689 | GCCTATTTTTATATA TCGC GCA GTGA TTTTTTATTAATTTT TERM 1962 1844113 - 1844127 + G 73 -3.6 -4.84274 | GTGTGGTTTGATCTA GATGAT GCG ATTATC TTTTTGATGTCGTTA YPTB1533 1843576 - 1844406 + | hypothetical protein TERM 1963 1844442 - 1844478 + T 80 -8.8 -3.93658 | gap 1, opp_overlap 1844447, overlap 1844447 ACGGGTTTCAATCAT AAAAATGCCGGT-AGGG TTAC CCCAGACCGGCATTTTG TTCTTTAAGGATCTT TERM 1964 1844473 - 1844447 - T 100 -8.7 -4.98255 | gap 1, opp_overlap 1844442 1844447 TTTCAATCATAAAAA TGCCGGT-AGGG TTAC CCCAGACCGGCA TTTTGTTCTTTAAGG TERM 1965 1844447 - 1844473 + T 100 -8.7 -5.00196 | gap 1, opp_overlap 1844447, overlap 1844442 TTTCAATCATAAAAA TGCCGGT-AGGG TTAC CCCAGACCGGCA TTTTGTTCTTTAAGG metG 1846562 - 1844535 - | methionyl-tRNA synthetase YPTB1535 1846827 - 1847939 + | putative ATPase TERM 1966 1848011 - 1847973 - f 86 -11.8 -3.07344 | opp_overlap 1847987 TGAGCGCGTAACACA CTGAGCCGGAAAGGTCAT TCA ATGATGCTTCCGGCTCAA GATCGGCTTAAATAG TERM 1967 1848516 - 1848500 - g 73 -2.2 -5.0666 | overlap 1848501 CACGTAAAAAAGAAA CGGTTC ATTTA GAACCT AAAAAAGTGATCATT udk 1848184 - 1848825 + | uridine kinase dcd 1848930 - 1849511 + | deoxycytidine triphosphate deaminase TERM 1968 1849626 - 1849653 + F 71 -4.8 -4.63592 | CGCTTTCCCTTCATT TGACTTGGTCAG CAGT CTGGACTAGTCA TTCTTTTTATTGAGA TERM 1969 1849837 - 1849823 - g 74 -4.2 -4.99638 | overlap 1849825 ACAGGTAGAGAAAAA GAGTGG TTA CCACTT GCAGTTGGAGGGTGA YPTB1538 1849698 - 1851554 + | putative assembly protein TERM 1970 1851644 - 1851609 - T 82 -10.5 -3.61922 | gap 1, opp_overlap 1851610 1851611 1851613, overlap 1851611 1851613 AATAGGTAGTGGAAA GAGATAGGCCCGATGG TTTCT CCACCGGGCCTAA-TC ATTTATTTTTCCAGG TERM 1971 1851610 - 1851645 + T 100 -8.3 -4.85782 | gap 1, opp_overlap 1851609 1851611 1851613, overlap 1851611 1851613 ATAGGTAGTGGAAAG AGA-TAGGCCCGATGG TTTCT CCACCGGGCCTAATCA TTTATTTTTCCAGGC TERM 1972 1851644 - 1851611 - T 100 -14 -3.38522 | gap 1, opp_overlap 1851610 1851611 1851613, overlap 1851609 1851613 TAGGTAGTGGAAAGA GA-TAGGCCCGATGG TTTCT CCACCGGGCCTAATC ATTTATTTTTCCAGG TERM 1973 1851611 - 1851644 + T 91 -11.8 -3.50746 | gap 1, opp_overlap 1851609 1851611 1851613, overlap 1851610 1851613 TAGGTAGTGGAAAGA GA-TAGGCCCGATGG TTTCT CCACCGGGCCTAATC ATTTATTTTTCCAGG TERM 1974 1851641 - 1851613 - T 100 -16.8 -3.26031 | opp_overlap 1851611 1851610 1851613, overlap 1851609 1851611 GGTAGTGGAAAGAGA TAGGCCCGATGG TTTCT CCACCGGGCCTA ATCATTTATTTTTCC TERM 1975 1851613 - 1851641 + T 100 -14.6 -2.57916 | opp_overlap 1851613 1851609 1851611, overlap 1851611 1851610 GGTAGTGGAAAGAGA TAGGCCCGATGG TTTCT CCACCGGGCCTA ATCATTTATTTTTCC YPTB1539 1853285 - 1851699 - | CorC/HlyC family Mg+2/Co+2/heavy metal efflux pumps TERM 1976 1853377 - 1853355 - H 72 -7.1 -3.91716 | gap 1 CCATTTGTTAAAGAA GTGCATCGAC CAGA GTCGAT-CAC AAAAAAATCAATCCA YPTB1540 1853727 - 1854506 + | ferric iron reductase involved in ferric hydroximate transport TERM 1977 1855141 - 1855120 - g 74 -6.5 -4.37886 | overlap 1855122 GGACCCGCGATAAAA TGGCCCTAG GTAG CCAGGGCGA CGGTATTTTCACCAG TERM 1978 1855842 - 1855861 + G 75 -7.9 -4.14874 | CTACGGATTATGGGA GCCAAAC AGCTTG GTTTGGC TTTTGAACATGTTAT YPTB1541 1854657 - 1856204 + | putative decarboxylase TERM 1979 1857506 - 1857489 - g 71 -2.7 -4.87665 | opp_overlap 1857491, overlap 1857491 1857505 TCCGATTGAGAAAAA CATTGCT TTTC AGCAATT CAGTGCGCCATCACT alcA 1856239 - 1857537 + | putative siderophore biosynthetic enzyme alcB 1857537 - 1858115 + | putative siderophore biosynthetic enzyme TERM 1980 1859873 - 1859860 - g 73 -8.1 -3.96469 | opp_overlap 1859859 1859860 ACAGCTCAACAATAA CCAGC ACAT GCTGG ATTTAGCTGACCCTG alcC 1858112 - 1859956 + | putative siderophore biosynthetic enzyme YPTB1545 1860931 - 1860083 - | putative ABC iron-siderophore transporter, ATP-binding subunit YPTB1546 1861968 - 1860928 - | putative ABC iron-siderophore transporter, permease subunit YPTB1547 1862995 - 1861955 - | putative ABC iron-siderophore transporter, permease subunit TERM 1981 1862535 - 1862523 - G 76 -9.1 -3.84246 | opp_overlap 1862521 1862523 CCGGTAAGCACCAAA CGCAC CGA GTGCG TATTCCGTTGCCCGC YPTB1548 1864071 - 1862992 - | putative ABC transporter, periplasmic iron-siderophore binding protein TERM 1982 1864138 - 1864117 - R 71 -8.7 -3.39908 | overlap 1864115 CGTTGGCAAAAGATA CAGCCGG AAAAGTGA CCGGCTG TGAGGGTATCCAACT YPTB1549 1866422 - 1864161 - | OMR family iron-siderophore receptor TERM 1983 1865460 - 1865499 + g 70 -7.8 -3.85698 | overlap 1865463 1865476 AGTTCGGGTTTCGGC GGATGCCCAATCCGATGC GGTG GTGGCGGATTGGGCATAA TTTGTCCGCCCACCA TERM 1984 1865463 - 1865496 + g 90 -13.9 -3.00946 | overlap 1865460 1865476 TCGGGTTTCGGCGGA TGCCCAATCCGATGC GGTG GTGGCGGATTGGGCA TAATTTGTCCGCCCA TERM 1985 1865625 - 1865637 + g 75 -3.3 -5.01811 | opp_overlap 1865626, overlap 1865626 1865628 ATCTATCTCCAAGAT ACCGT AAA ACGGG TTTTTACTTTGATCA TERM 1986 1866385 - 1866402 + g 88 -2.5 -5.70829 | opp_overlap 1866386, overlap 1866386 1866388 GTGCAGTTAAAACGC ACTCGGC TTTT GCCGTGA TTTTTTTCTAGTATT TERM 1987 1866632 - 1866662 + r 73 -7.5 -4.08767 | opp_overlap 1866625 1866632 1866635 CCGAACATCGTAAAA CTACGGTCTGACC ACGTG GGTCAGTACGTGG TTTTGAAAACATGAA YPTB1550 1868466 - 1866652 - | putative siderophore biosynthetic enzyme TERM 1988 1867993 - 1867980 - G 77 -4.5 -4.83615 | gap 1 TATTCGCGATAAAAA CG-GGG TGG CCCTCG CTCATCGCTGTTTCT TERM 1989 1870106 - 1870095 - g 72 -5.8 -4.36914 | overlap 1870097 CGTTGCTTGAGAAAA CACC ACGC GGTG CGGGGGATGAAATTC galU 1869413 - 1870303 + | UTP-glucose-1-phosphate uridylyltransferase galF 1870387 - 1871280 + | UTP-glucose-1-phosphate uridylyltransferase TERM 1990 1871359 - 1871374 + F 89 -10.4 -4.01603 | overlap 1871354 1871371 TTGGCAGTTTAGGCC GCGCCA TTTG TGGCGC TTTGCTCTTTGCCTA gnd 1871666 - 1873075 + | 6-phosphogluconate dehydrogenase TERM 1991 1873246 - 1873222 - f 100 -8.6 -5.06414 | opp_overlap 1873222 GCTGCCCAATAAAAA CGCCTCCA GTGATAAGT TGGAGGCG TTTTTTGTGCCCAGA TERM 1992 1873222 - 1873246 + F 100 -10 -5.24129 | opp_overlap 1873222 GCTGCCCAATAAAAA CGCCTCCAGT GATAA GTTGGAGGCG TTTTTTGTGCCCAGA TERM 1993 1873283 - 1873265 - f 100 -16 -4.36914 | opp_overlap 1873265 TTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC TERM 1994 1873265 - 1873283 + F 100 -16 -3.07307 | opp_overlap 1873265 TTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC tnp 1873396 - 1873854 + | transposase for the IS1541 insertion element TERM 1995 1873932 - 1873956 + T 100 -9.9 -4.42806 | opp_overlap 1873935, overlap 1873934 1873935 ATAGGCGCATATGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTTGCCAGTGA TERM 1996 1873934 - 1873954 + T 100 -12.5 -3.81958 | opp_overlap 1873935, overlap 1873932 1873935 AGGCGCATATGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTTGCCAGT TERM 1997 1873953 - 1873935 - T 100 -16 -4.8048 | opp_overlap 1873934 1873932 1873935 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTGCCAG TERM 1998 1873935 - 1873953 + T 100 -16 -2.88452 | opp_overlap 1873935, overlap 1873934 1873932 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTGCCAG hisI 1874599 - 1873985 - | bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein hisF 1875369 - 1874593 - | imidazole glycerol phosphate synthase subunit HisF TERM 1999 1874898 - 1874910 + g 74 -9.1 -3.77206 | CCCAATCTTCGGTTT GCCAC GTG GTGGC TTTGGTACGCTTCTC hisA 1876088 - 1875351 - | 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase TERM 2000 1875903 - 1875923 + g 74 -9 -3.65902 | opp_overlap 1875888 CTCGCGCAGTAGTGG GATCTGGC GAGCG GCCGGATC TTTGGCTCCGGTCAG hisH 1876684 - 1876094 - | imidazole glycerol phosphate synthase subunit HisH hisB 1877751 - 1876684 - | imidazole glycerol-phosphate dehydratase/histidinol phosphatase hisC 1878896 - 1877748 - | histidinol-phosphate aminotransferase hisD 1880230 - 1878899 - | histidinol dehydrogenase TERM 2001 1880153 - 1880167 + g 70 -2.1 -4.93316 | gap 1, overlap 1880162 TGCATTGATGGCCGG GCGGCT CAAC AGC-GC TTTTTGCTGTTCTTC hisG 1881133 - 1880234 - | ATP phosphoribosyltransferase TERM 2002 1880270 - 1880288 + g 75 -10.2 -3.33711 | opp_overlap 1880263 1880270 1880269 1880266 CGGTAATACCAGAAT GGAGCTGG CAC CCAGCGCC TTCAATTTCTCCATG TERM 2003 1881307 - 1881356 + H 78 -10.1 -3.48395 | gap 1, opp_overlap 1881319, overlap 1881319 GTCTATAAAATGATG AGCAATAAAAAAGCCCTCGGAAGA TTA TCTTCCGAGGGCTCTCT-ACTGCG TTCTCTACGCCACCT TERM 2004 1881345 - 1881319 - H 100 -21 -5.52023 | opp_overlap 1881307 1881319 ATGAGCAATAAAAAA GCCCTCGGAAGA TTA TCTTCCGAGGGC TCTCTACTGCGTTCT TERM 2005 1881319 - 1881345 + H 100 -21 -2.96538 | opp_overlap 1881319, overlap 1881307 ATGAGCAATAAAAAA GCCCTCGGAAGA TTA TCTTCCGAGGGC TCTCTACTGCGTTCT YPTB1563 1881839 - 1882666 + | hypothetical protein TERM 2006 1882743 - 1882764 + T 91 -10.2 -4.15833 | opp_overlap 1882747 GGGTTTATGCTTCAA GGGATTGC CTATTT GCAATCCC TTTTAAAATAATAAT YPTB1564 1883629 - 1882973 - | hypothetical protein TERM 2007 1884468 - 1884494 + r 72 -10.1 -2.88849 | gap 1, opp_overlap 1884457, overlap 1884463 1884469 ACATCCATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCTCTGCC TERM 2008 1884469 - 1884495 + r 84 -10.1 -3.82218 | gap 1, opp_overlap 1884457, overlap 1884463 1884468 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCTCTGCCT YPTB1565 1885733 - 1884738 - | ABC sugar transporter, permease subunit YPTB1566 1887286 - 1885730 - | sugar ABC transporter ATPase YPTB1567 1887572 - 1888663 + | hypothetical protein TERM 2009 1888773 - 1888798 + F 100 -7.6 -6.15259 | opp_overlap 1888773 1888776 ATACGCCGAATGAAA TAGCCGACGT TTAAAC GCGTCGGTTA TTTTTTTTTGCATTC TERM 2010 1888960 - 1888975 + F 74 -10.4 -2.57132 | overlap 1888959 GTGCCCACCGGTATG CGCTGC ACAT GCAGCG ATTATGGCGCAGCAG yeeF 1889123 - 1890514 + | APC family amino acid permease TERM 2011 1890570 - 1890547 - T 86 -11.8 -3.19157 | gap 1, opp_overlap 1890547 CATTAAGTTTATCAA TCCGGC-ACAG TCT CTGTTGCCGGA TTTTTTGTATTCAGA TERM 2012 1890547 - 1890570 + T 100 -11.8 -5.47159 | gap 1, opp_overlap 1890547 CATTAAGTTTATCAA TCCGGC-ACAG TCT CTGTTGCCGGA TTTTTTGTATTCAGA sbcB 1892742 - 1891312 - | exonuclease I YPTB1570 1893005 - 1894144 + | hypothetical protein YPTB1571 1894578 - 1894895 + | hypothetical protein TERM 2013 1894952 - 1894974 + T 100 -11.3 -5.16841 | opp_overlap 1894950 AGGGGAAAGAGAGTG GGGCTGGCA TCTAT TGTCAGCCC TTTTTATTGGTGTGC YPTB1572 1898266 - 1895039 - | putative invasin TERM 2014 1897118 - 1897131 + g 71 -6.7 -4.21773 | TTGTGCTGTGGCATT TGCCA CTAA TGGCA TTGTTTGTCTTGCCG TERM 2015 1898825 - 1898808 - H 76 -2.7 -5.38054 | opp_overlap 1898822, overlap 1898822 TTTTATAAATAAAAA TGACATT TTAA AAAGTCA ATCTGACATTATTCT TERM 2016 1898832 - 1898822 - H 73 -5.4 -4.65168 | opp_overlap 1898822, overlap 1898808 ATGACATTTTAAAAA GTCA ATC TGAC ATTATTCTGAAAACA TERM 2017 1898872 - 1898850 - H 75 -5.6 -4.65933 | opp_overlap 1898852, overlap 1898852 TATTCTGAAAACAAA TACACACATT AAT AATGCGTGTT CTCTATTCATTCTGG TERM 2018 1898870 - 1898852 - H 77 -8.2 -3.93868 | opp_overlap 1898852, overlap 1898850 TTCTGAAAACAAATA CACACATT AAT AATGCGTG TTCTCTATTCATTCT TERM 2019 1899891 - 1899902 + G 70 -2.2 -4.92314 | CCCGCCGTGGGGTTA GGTA TTTT TGCC TTTTTCTACCTTGAT TERM 2020 1900261 - 1900231 - g 83 -6.8 -4.9725 | overlap 1900232 1900233 ATGCCGATAGAAAAA CCCATCGCCGCAAC CCG ATTGCGACGCTGAA CCTAGTTGTCGCGGC YPTB1573 1899210 - 1900610 + | major facilitator superfamily anion:cation symporter family transporter YPTB1574 1901044 - 1900619 - | hypothetical protein YPTB1575 1901469 - 1902209 + | putative oxidoreductase YPTB1576 1902257 - 1903099 + | 2-hydroxyhepta-2,4-diene-1, 7-dioateisomerase / 5-carboxymeth... YPTB1577 1903206 - 1904408 + | putative racemase TERM 2021 1904890 - 1904902 + G 71 -9.1 -3.50853 | CTTTTCGGCGAGACG CAGGC AAT GCCTG TTGTCCTTGGGCCAG lldD 1904686 - 1905831 + | L-lactate dehydrogenase TERM 2022 1905957 - 1905928 - T 83 -10.7 -3.4678 | overlap 1905929 ACTGTGACACGAGAA GGGTTAAGGGGGG GAAG CTCCCCTTAACCG CTTGGGGTCGCGCAG TERM 2023 1905956 - 1905929 - T 95 -14.2 -2.67747 | overlap 1905928 CTGTGACACGAGAAG GGTTAAGGGGGG GAAG CTCCCCTTAACC GCTTGGGGTCGCGCA argG 1907403 - 1906036 - | argininosuccinate synthase TERM 2024 1907933 - 1907944 + G 81 -3.6 -5.47821 | CGACAGTTTCAATAT GCTG ATTG CGGC TTTTTTTGCCTCCGT yeeO 1907697 - 1909127 + | hypothetical protein YPTB1581 1910495 - 1909155 - | putative MFS aromatic acid:H+ symporter TERM 2025 1910445 - 1910476 + g 85 -3 -5.65177 | gap 1, overlap 1910448 1910449 GACATCTTTGATTGT TAATTGCTG-CGGCT GCC AGCCATCAGCAGATA TTTTTTTATAGATGT YPTB1582 1911439 - 1910531 - | putative polysaccharide deacetylase TERM 2026 1911180 - 1911190 + g 77 -8.2 -4.21141 | ACTTCGTGTCCAGCC GCGG CTA CCGC TTTCATTTGTTCAGG YPTB1583 1911989 - 1912684 + | hypothetical protein TERM 2027 1912883 - 1912864 - g 93 -8.6 -5.06103 | AGAACGGCTAAAAAA TCACGAGC TCAG ACTCGTGA GGCAAGAGAGGCTGT TERM 2028 1912927 - 1912915 - g 91 -3.3 -5.83211 | GAGGAAAATAAAAAA GCACA ACT TGAGC GTGATAAACAGCTAA YPTB1584 1912774 - 1913313 + | hypothetical protein TERM 2029 1913380 - 1913416 + F 79 -6.8 -4.66537 | gap 1, opp_overlap 1913387 1913393 1913394, overlap 1913383 AATCTTTACAAATAC TCATAGATGAAAAGTCC CTCA GGGCTTTTCAT-TAAGA TTTTATGTTCAGCCA TERM 2030 1913664 - 1913641 - f 100 -11 -4.81851 | opp_overlap 1913641 ACTGAAATGCAAAAA CCCTGCTTAG TTAC CTAGGCAGGG TTCTTTAATTTGGCT TERM 2031 1913641 - 1913664 + F 100 -13.2 -4.15998 | opp_overlap 1913641 ACTGAAATGCAAAAA CCCTGCTTAG TTAC CTAGGCAGGG TTCTTTAATTTGGCT TERM 2032 1914004 - 1914022 + F 100 -13.2 -4.01078 | CCAGGGGGTAATCTG CTCTCCTG ATT CAGGAGAG TTTATGGTCACTTTT TERM 2033 1914075 - 1914060 - g 71 -4.6 -4.56914 | overlap 1914061 TTATGGAAATTAAAA TCCTGC ACAA GCAGGG AATGAGTAGCCGGGC YPTB1585 1914026 - 1915048 + | putative transposase TERM 2034 1915129 - 1915115 - g 82 -11.4 -3.3506 | overlap 1915106 TGGAAAGCCTTATAA GCGCAG CGC CTGCGC TGTCACAACAGGCAG YPTB1586 1915048 - 1915827 + | transposase/IS protein TERM 2035 1916219 - 1916194 - T 100 -10.5 -4.34402 | TGGTGCATATTAAAA TGTGCGGAG CTATTCTC CTCCGCACA TACAGATTTAACGTC YPTB1587 1916436 - 1916227 - | hypothetical protein YPTB1588 1916926 - 1916426 - | hypothetical protein YPTB1589 1917177 - 1916992 - | hypothetical protein TERM 2036 1917459 - 1917492 + r 100 -15.5 -3.31322 | opp_overlap 1917450 1917466 1917480, overlap 1917466 1917469 GAGAAAGCTGGTGAG CCCTAAATAAGGGAT GCAA AACCCTTATTTAGGG TTGTCGGCCATTACA YPTB1590 1918447 - 1917521 - | hypothetical protein TERM 2037 1917740 - 1917753 + g 95 -3.8 -5.72616 | opp_overlap 1917740 ACGGGAAGGTGAAAT GGGA TGACTC TCCC TTTTTTTGTATAAAT TERM 2038 1917906 - 1917924 + g 77 -4.6 -4.96501 | ACATCTAATGCTGTG TTTTCAGG TAG TCTGGAAA TTTGTTTTTCTACGC TERM 2039 1918418 - 1918435 + g 80 -2.7 -5.44721 | TGACATATAATGAGT TATAAGC AATG GCTGATA TTTTTTTGACATAAT TERM 2040 1919288 - 1919308 + r 93 -11.2 -4.15565 | opp_overlap 1919288 ACTAGTGGTGTAAAA GGGATACC TTTTC GGTATCCC TTTTACAATAATCAG TERM 2041 1919308 - 1919288 - R 93 -11.2 -4.08945 | opp_overlap 1919288 ACTAGTGGTGTAAAA GGGATACC TTTTC GGTATCCC TTTTACAATAATCAG fyuA 1921341 - 1919320 - | OMR family pesticin/yersiniabactin receptor protein TERM 2042 1921140 - 1921159 + g 81 -12.8 -2.60244 | overlap 1921136 CTCTGGGGAGTTTGT CGCTGGCG GTGA CGCCGGCG TCGCTTAATTCCGGC TERM 2043 1921425 - 1921464 + r 90 -11.5 -3.72051 | overlap 1921426 1921429 1921429 ATTTCTAATAGTGGT GCTACCCGAAACGGGTT TATTTC AACCTGTTTCGGGTCGG TTTGCGCTTATTGGG TERM 2044 1921426 - 1921463 + r 100 -15 -2.82749 | overlap 1921425 1921429 1921429 TTTCTAATAGTGGTG CTACCCGAAACGGGTT TATTTC AACCTGTTTCGGGTCG GTTTGCGCTTATTGG TERM 2045 1921429 - 1921439 + r 87 -8.2 -4.43208 | overlap 1921426 1921425 1921429 CTAATAGTGGTGCTA CCCG AAA CGGG TTTATTTCAACCTGT TERM 2046 1921429 - 1921460 + r 100 -15.3 -2.66593 | overlap 1921429 1921426 1921425 CTAATAGTGGTGCTA CCCGAAACGGGTT TATTTC AACCTGTTTCGGG TCGGTTTGCGCTTAT TERM 2047 1921494 - 1921519 + r 91 -6.7 -5.46276 | opp_overlap 1921494, overlap 1921496 GCAGAATGGCGATAA CGGTCGACGGC GAGA GCCGTCAGGCG TTTTTTGTCTATCTT TERM 2048 1921496 - 1921518 + r 72 -7.7 -3.85325 | gap 1, opp_overlap 1921494, overlap 1921494 AGAATGGCGATAACG GTC-GACGGC GAGA GCCGTCAGGC GTTTTTTGTCTATCT ybtE 1923049 - 1921472 - | yersiniabactin siderophore biosynthetic protein TERM 2049 1922114 - 1922104 - G 71 -6.8 -4.2349 | overlap 1922081 CCGCCATACCGAAAA CCTG TTG CAGG GTACAGTCAAAGGTG TERM 2050 1922189 - 1922207 + g 72 -10.3 -3.04461 | opp_overlap 1922185, overlap 1922191 TGCCTGAATGACGCG CAGCGAC GAAAG GTCGCTG TCTTCCCACTCCCTG ybtT 1923841 - 1923053 - | yersiniabactin biosynthetic protein YbtT ybtU 1924953 - 1923853 - | yersiniabactin biosynthetic protein YbtU TERM 2051 1924455 - 1924445 - G 73 -5.4 -4.48713 | GCCAGCAACAACAAA TCCA GAG TGGA GTAGAGCAACTGTCG irp1 1934441 - 1924950 - | yersiniabactin biosynthetic protein TERM 2052 1925233 - 1925253 + g 71 -7.5 -4.07885 | overlap 1925234 TTGTCGAGCCACGTT TCTGCCGCT TGC AGCGTCAGG TTTTGCGACACCATA TERM 2053 1928412 - 1928426 + g 83 -11.4 -3.61398 | ATGCCGCCGTTTTTC CAGCGC GAT GCGCTG TTCTTCCGGGGAAAG TERM 2054 1929043 - 1929053 + g 70 -2.4 -4.9725 | overlap 1929044 GCAGGAGGAATGACC GGCG TTG CGGC TTTTTCTGTGGCGCT TERM 2055 1929206 - 1929226 + g 79 -11.1 -3.55444 | overlap 1929207 ACGCGCCCATACCTC GGCTGGCGA GCG TCGCCAGCA TTTCCGGCGTGGCCG TERM 2056 1929207 - 1929225 + g 90 -14.6 -2.73124 | overlap 1929206 CGCGCCCATACCTCG GCTGGCGA GCG TCGCCAGC ATTTCCGGCGTGGCC TERM 2057 1929483 - 1929440 - G 86 -13.2 -3.02144 | gap 1 GCAGGGTTTGCAACA GCTGGCTTGCCGCCTGCGC TTTTACC GCGAAAACGGCA-GCCAGC TGGTGGTCATCAAGC TERM 2058 1929634 - 1929617 - G 72 -11.3 -2.67747 | overlap 1929616 CGCCCACATCACAAC GGCAGAC GCGC GTCTGCC CGCCCTCCACGTCGC TERM 2059 1929671 - 1929701 + g 73 -3.2 -4.96848 | gap 1, overlap 1929673 1929683 ATGACTCATCCACGC GCGGCGCCA-GCA GGGCGA TGCGTCGCGCCCC TTTTTCTCTGAGCCA TERM 2060 1932020 - 1932008 - G 77 -4.7 -4.84359 | CCATCTCCAGAAAAA CGCGG GCG CCGAG CTGATGCGCCACCTG TERM 2061 1932845 - 1932871 + g 93 -13.6 -3.64682 | CCCCCGATTTCTCAC CGGCCCAGGCGC TGA GCGCCTCGGCGG TTTCACGGTTTAATG TERM 2062 1933001 - 1933042 + g 86 -7.9 -4.84761 | gap 1, opp_overlap 1932986 1932985, overlap 1933004 1933005 CCGTCGCCAGCCGCC GCAACGCGCTGTCGCT-GGC GGC GCTGAGCAGCAGCGCGGTAC TTTTTCTGCCGCTAT TERM 2063 1933005 - 1933038 + g 75 -11.7 -2.58667 | gap 1, opp_overlap 1932986 1932985, overlap 1933004 1933001 CGCCAGCCGCCGCAA CGCGCTGTCGCT-GGC GGC GCTGAGCAGCAGCGCG GTACTTTTTCTGCCG TERM 2064 1933517 - 1933557 + g 81 -12.5 -2.93073 | overlap 1933525 1933529 TGACTGCCTGTTGCC CTGCGACGGAAGGGGCGGT ATA GCCGACCTTTCTGTTGCCG TCGTTGTTGACCGCG TERM 2065 1934506 - 1934476 - R 78 -10.5 -3.33711 | gap 1, overlap 1934471 GATTCACAAAGTCAA TGGAACGCCAT-GC GTTC GCGATGGCGTTCCG GGGAAAATCAGTTTG irp2 1940636 - 1934529 - | yersiniabactin biosynthetic protein TERM 2066 1934829 - 1934871 + g 75 -10.5 -3.34398 | gap 1, overlap 1934827 GTGTGGCTGAGAGTG CTCAGGGCATACGCGCGGTG AGCG CTCTGCGCAT-TGCCCTGCG TGTTTAACGGGAGGC TERM 2067 1934900 - 1934917 + g 71 -8.3 -3.78775 | GCACCAGCGCGGCGA GCGGCAG TTGC CAGCCGC TTTCATCCTCGGCCA TERM 2068 1935458 - 1935425 - G 74 -9.5 -3.60525 | overlap 1935446 1935449 TCCATGCAGAGAGAA CCGTTGACCACACCG ACAA CAGTACGGCCGACGG GGTGAGATGGGCGTC TERM 2069 1935466 - 1935482 + g 88 -7.2 -5.0133 | opp_overlap 1935449 1935446, overlap 1935467 GCCGACGGGGTGAGA TGGGCG TCAGC CGCCCG TTTTTTCAGCCGATG TERM 2070 1936375 - 1936403 + g 78 -6 -4.70659 | gap 1, opp_overlap 1936377 1936379, overlap 1936378 1936379 ACATTGCCAGTTGAT AAGAGTTGCTGCC AGAG GGCGGCAAC-CTG TTTTTCAATGTCGCC TERM 2071 1936378 - 1936401 + g 76 -8.8 -3.96999 | opp_overlap 1936377 1936379, overlap 1936375 1936379 TTGCCAGTTGATAAG AGTTGCTGCC AGAG GGCGGCAACC TGTTTTTCAATGTCG TERM 2072 1936379 - 1936400 + g 81 -12.3 -2.97476 | opp_overlap 1936377 1936379, overlap 1936378 1936375 TGCCAGTTGATAAGA GTTGCTGCC AGAG GGCGGCAAC CTGTTTTTCAATGTC TERM 2073 1936400 - 1936379 - G 73 -10.1 -3.23393 | opp_overlap 1936379 1936378 1936375, overlap 1936377 TGCCAGTTGATAAGA GTTGCTGCC AGAG GGCGGCAAC CTGTTTTTCAATGTC TERM 2074 1937933 - 1937951 + g 73 -10.2 -3.14132 | CACCCGGCACCCAGT CAGGGCAG TCC CGGCCCTG TTCATCCACCACCCG TERM 2075 1938721 - 1938701 - G 71 -8.2 -3.6682 | overlap 1938713 GCTGATCCAGCGAAA CCGGAACG TAAAC CGCCCCGG CCAGCAGGACGGCCA TERM 2076 1938733 - 1938713 - G 71 -8.2 -3.77241 | overlap 1938701 AAACCGGAACGTAAA CCGCCCCG GCCAG CAGGACGG CCAGAACCGCAACAA TERM 2077 1938818 - 1938837 + g 72 -10.7 -2.69799 | opp_overlap 1938816, overlap 1938816 CGCACTCGATTAACC TGCCCGC GCAACG GCGGGCA TAGTCTGTCAGCTCA TERM 2078 1939562 - 1939552 - G 70 -2.4 -4.86001 | AGCACGGCAGAAAAA CAGG TCG CCAG CGCCATTGTCGGCGT TERM 2079 1940712 - 1940722 + r 87 -8.2 -4.55697 | opp_overlap 1940703, overlap 1940712 1940719 AACAATTGGATGCTA CCCG AAA CGGG TTTATTTATGCCCGT TERM 2080 1940712 - 1940743 + r 100 -15.2 -3.14132 | opp_overlap 1940703, overlap 1940712 1940719 AACAATTGGATGCTA CCCGAAACGGGTTT ATTT ATGCCCGTTTCGGG TTGGTAACAGGCGGA TERM 2081 1940794 - 1940764 - R 100 -21.3 -3.93658 | opp_overlap 1940768 AACAGGCGGAAAGAA CAGAGGCCCGGAT GGGGT ATCCGGGCCTCTG TCAGGGAGGAGTTTA TERM 2082 1940768 - 1940790 + r 100 -15.6 -2.87132 | opp_overlap 1940764 GGCGGAAAGAACAGA GGCCCGGATG GGG TATCCGGGCC TCTGTCAGGGAGGAG ybtA 1941786 - 1940827 - | transcriptional regulator YbtA TERM 2083 1942078 - 1942088 + G 77 -4.6 -4.85599 | GGCATTAACCAGCCT GGGG GCG CTCC TTTTTCTGGCGTGGA ybtP 1941953 - 1943755 + | lipoprotein inner membrane ABC-transporter TERM 2084 1943817 - 1943852 + G 88 -13.4 -3.14881 | gap 1 TCCAGCGTTGGCAGT CAG-GCCAGGATGCTGC GAC GCAGTATGCTGGCGCTG TTGCTGGCGGCATTC TERM 2085 1944360 - 1944328 - g 73 -8.5 -3.86346 | gap 1, overlap 1944329 1944332 CGATGCGGCGACAAA TGCAGACGCTGGGG GAAGCG CACCAGCGTCTG-A GCGGCGATATCGTTG TERM 2086 1944360 - 1944329 - g 71 -10.1 -2.91593 | overlap 1944328 1944332 GATGCGGCGACAAAT GCAGACGCTGGGG GAAGCG CACCAGCGTCTGA GCGGCGATATCGTTG ybtQ 1943742 - 1945544 + | inner membrane ABC-transporter YbtQ ybtX 1945537 - 1946817 + | MFS superfamily transporter signal transducer ybtS 1946845 - 1948149 + | salicylate synthase Irp9 TERM 2087 1948284 - 1948312 + T 74 -10.3 -2.72829 | opp_overlap 1948289, overlap 1948283 1948289 TGATAAAAGTCTATA TAGAACCACCTCC TGT GGAGGTGGTGGTA ATTTGCCAGAGTGTG TERM 2088 1948289 - 1948310 + T 73 -10.1 -2.90813 | opp_overlap 1948289, overlap 1948284 1948283 AAAGTCTATATAGAA CCACCTCCT GTGG AGGTGGTGG TAATTTGCCAGAGTG TERM 2089 1948307 - 1948289 - T 100 -14.6 -3.60814 | opp_overlap 1948289 1948284 1948283 AAAGTCTATATAGAA CCACCTCC TGT GGAGGTGG TGGTAATTTGCCAGA TERM 2090 1948758 - 1948770 + T 70 -5.5 -4.56597 | opp_overlap 1948758, overlap 1948753 GAGAGGGGGACGATA TGCGG CAT TCGCA TTTTTGCCCCGCGGC TERM 2091 1950229 - 1950172 - T 82 -10.2 -3.68988 | gap 3, opp_overlap 1950174 1950175 1950187, overlap 1950173 1950187 GGCGAGGTAACAGAA TCCTCAGCGCCTAAATACCGTCTTGCCAA CTA TCGGCAAG-CGGTATTTAGGC-C-GCAAA TGGTTTTCCCGACTT TERM 2092 1950231 - 1950173 - T 100 -16.3 -2.81072 | opp_overlap 1950174 1950175 1950187, overlap 1950172 1950187 GCGAGGTAACAGAAT CCTCAGC-GCCTAAATACCGTCTTGCCAA CTA TCGGCAAG-CGGTATTTAGGCCGCAAATG GTTTTCCCGACTTCA TERM 2093 1950175 - 1950229 + T 95 -13.1 -3.08776 | opp_overlap 1950172 1950173 1950187, overlap 1950174 1950187 GAGGTAACAGAATCC TCAGCG-CCTAAATACCGTCTTGCCAA CTA TCGGCAAG-CGGTATTTAGGCCGCAAA TGGTTTTCCCGACTT TERM 2094 1950216 - 1950187 - T 100 -12.3 -3.55444 | gap 1, opp_overlap 1950175 1950174 1950187, overlap 1950172 1950173 TCCTCAGCGCCTAAA TACCGTCTTGCCAA CTA TCGGCAAG-CGGTA TTTAGGCCGCAAATG TERM 2095 1950187 - 1950216 + T 78 -10.1 -3.53224 | gap 1, opp_overlap 1950187 1950172 1950173, overlap 1950175 1950174 TCCTCAGCGCCTAAA TACCGTCTTGCCAA CTA TCGGCAAG-CGGTA TTTAGGCCGCAAATG YPTB1603 1950912 - 1950283 - | GerR family transcriptional regulatory protein TERM 2096 1951209 - 1951193 - R 73 -8.7 -3.40558 | overlap 1951191 TATATATTCCAAACA TCCGTGG CAA CCACAGA GAGATTTCCGGAATA YPTB1604 1952462 - 1951170 - | TRAP dicarboxylate family transporter DctM subunit YPTB1605 1952988 - 1952482 - | TRAP dicarboxylate family transporter DctQ subunit TERM 2097 1952821 - 1952809 - G 75 -7.7 -4.15044 | CGCTGCGCCAATAAA GGTGA ACG TCACC ATACATAAAATAGCG TERM 2098 1953101 - 1953075 - R 75 -10.3 -2.73875 | overlap 1953072 CGTTGGGTAATATCA GCGGTATTAAA AATAA TTCAATACCGC CGGATGGATGTTATT YPTB1606 1954104 - 1953112 - | TRAP dicarboxylate family transporter DctP subunit YPTB1607 1954627 - 1955367 + | putative phosphopantetheinyl transferase TERM 2099 1955787 - 1955768 - T 95 -12.8 -2.94322 | opp_overlap 1955764 1955761, overlap 1955765 ATTGGACGTAAAGTA GGCCGCCA TAAA CGGCGGCC TGAGGTTAATTTACG rafA 1957919 - 1955793 - | alpha-galactosidase lacY 1959304 - 1957997 - | galactoside permease TERM 2100 1959447 - 1959483 + H 89 -12.6 -2.87881 | gap 1, opp_overlap 1959442 1959447, overlap 1959447 1959454 CGGCATTAGAGTAGA TCCGAAACGTTTCGGAT TTAA ATCT-AAACGTTTCGGA TGTGTGACGAACTTA TERM 2101 1959447 - 1959462 + H 70 -7.6 -3.7108 | opp_overlap 1959442 1959447, overlap 1959447 1959454 CGGCATTAGAGTAGA TCCGAA ACGT TTCGGA TTTAAATCTAAACGT TERM 2102 1959483 - 1959447 - H 75 -10.4 -2.87468 | gap 1, opp_overlap 1959447 1959447 1959454, overlap 1959442 CGGCATTAGAGTAGA TCCGAAACGTTTCGGAT TTAA AT-CTAAACGTTTCGGA TGTGTGACGAACTTA TERM 2103 1959870 - 1959886 + G 75 -5.9 -4.60487 | CATCACGTCCACGAG TGTTGAA TAA TTCGACA TTTTTGGAAATGATA TERM 2104 1960323 - 1960313 - g 71 -4.6 -4.59773 | GGGTATCTGCAAAAA GCGG ATC CCAC TCGTCCTGGCGGTTA thuR 1959659 - 1960675 + | putative ThuR, regulatory protein for trehalosemaltose transp... TERM 2105 1960788 - 1960821 + T 71 -9.7 -2.66748 | opp_overlap 1960793, overlap 1960793 CAGTGATAGAAAAGC AAAAATCCCGCTTAG TTTC CTAAACGGGATTTTC TAAATTTGGCTCCTC TERM 2106 1960816 - 1960793 - T 100 -11.8 -5.15526 | opp_overlap 1960788 1960793 ATAGAAAAGCAAAAA TCCCGCTTAG TTTC CTAAACGGGA TTTTCTAAATTTGGC TERM 2107 1960793 - 1960816 + T 95 -9.6 -4.51196 | opp_overlap 1960793, overlap 1960788 ATAGAAAAGCAAAAA TCCCGCTTAG TTTC CTAAACGGGA TTTTCTAAATTTGGC YPTB1611 1961893 - 1961081 - | hypothetical protein TERM 2108 1961842 - 1961863 + g 75 -5.8 -4.62772 | overlap 1961843 GTGCCTCATGCCATT GCGCAAGC ATCTCC GCTTGCGG TTTATTTGCTTTCCA TERM 2109 1962237 - 1962256 + r 76 -9.3 -3.49858 | opp_overlap 1962231, overlap 1962248 CTGAACTTATCAGCA GCCATGG CATTCA CCATGGC TTATGGTGTGCTTGA YPTB1612 1962567 - 1962283 - | hypothetical protein TERM 2110 1962737 - 1962751 + r 75 -5.6 -4.71318 | GAGGAGCAGGGAAGG CCGCTG CTC CAGAGG TTGTTTTTTGATCTT YPTB1613 1963655 - 1962804 - | hypothetical protein YPTB1614 1965476 - 1963758 - | efflux ABC transporter ATP-binding protein YPTB1615 1966764 - 1966378 - | AraC family transcription regulator TERM 2111 1966695 - 1966709 + g 71 -9.2 -3.56594 | opp_overlap 1966695, overlap 1966706 CTTCAAGATAGATGA CCCGCC CTA GGTGGG TTTCGACCCATTTAC TERM 2112 1966871 - 1966897 + H 71 -6.6 -4.14243 | opp_overlap 1966871 AATGTGCGGTAAAGA CTTTTTGGCCGA GGT TTGGCAAAAGAG TTTTCAAGTGCCATA TERM 2113 1967033 - 1967043 + H 87 -5.4 -5.42259 | TCTGATAGCGGTTGT TGGT GTA ACCA TTTTTTTAAAGATGC YPTB1616 1967319 - 1967558 + | hypothetical protein YPTB1617 1967882 - 1967649 - | hypothetical protein YPTB1618 1968465 - 1968749 + | hypothetical protein TERM 2114 1968761 - 1968790 + F 95 -12.9 -3.10071 | opp_overlap 1968752 1968776, overlap 1968788 ATAAACGTGTCCCGA TGCTGGCACTACC AACA GGCAGTGTCAGCA TGTTACCTGCAATTT YPTB1619 1969012 - 1969311 + | hypothetical protein YPTB1620 1969354 - 1969665 + | hypothetical protein aroP 1969902 - 1971275 + | amino acid APC transporter TERM 2115 1971509 - 1971545 + T 89 -6.8 -5.28481 | opp_overlap 1971511, overlap 1971511 AATTCGCCCTCAACC AAGCATATAACCAT TTTAATATT ATGGTTATATGCTG TTTTTTAGTTAAATA TERM 2116 1971543 - 1971511 - T 74 -9.4 -3.33696 | opp_overlap 1971509 1971511 TTCGCCCTCAACCAA GCATATAACCAT TTTAATATT ATGGTTATATGC TGTTTTTTAGTTAAA TERM 2117 1971511 - 1971543 + T 88 -9.4 -4.26777 | opp_overlap 1971511, overlap 1971509 TTCGCCCTCAACCAA GCATATAACCAT TTTAATATT ATGGTTATATGC TGTTTTTTAGTTAAA YPTB1622 1972179 - 1971571 - | palmitoyl transferase for Lipid A YPTB1623 1973181 - 1973297 + | hypothetical protein cspC 1973340 - 1973549 + | cold shock-like protein CspC TERM 2118 1973561 - 1973592 + T 86 -11.7 -3.34398 | opp_overlap 1973550 1973569, overlap 1973569 CTAATCAGCGTTTGC TGTAAAAACCCGC CTTTGT GCGGGTTTTTTCA TATTTGGGGAAACCC TERM 2119 1973569 - 1973584 + T 91 -7.5 -5.32699 | opp_overlap 1973569, overlap 1973561 CGTTTGCTGTAAAAA CCCGC CTTTGT GCGGG TTTTTTCATATTTGG TERM 2120 1973584 - 1973569 - T 78 -7.5 -4.56597 | opp_overlap 1973569 1973561 CGTTTGCTGTAAAAA CCCGC CTTTGT GCGGG TTTTTTCATATTTGG YPTB1625 1974395 - 1973640 - | hypothetical protein TERM 2121 1974752 - 1974766 + H 76 -7.8 -4.22858 | overlap 1974749 TAACGCCGCATCTGC CCGCTA TCT TGGCGG TTATTTATCTGTTAT rrmA 1974795 - 1975634 + | 23S rRNA methyltransferase A YPTB1627 1976134 - 1975856 - | hypothetical protein TERM 2122 1976351 - 1976320 - R 100 -9.5 -4.98255 | overlap 1976322 GGCCAATCATAAAAA CATTGCAGGTGAC ATGATA GCCACCCGCAATA TACCTCAAGAGGTGA TERM 2123 1976349 - 1976322 - R 88 -9.9 -4.11322 | overlap 1976320 CCAATCATAAAAACA TTGCAGGTGAC ATGATA GCCACCCGCAA TATACCTCAAGAGGT YPTB1628 1978437 - 1976356 - | hypothetical protein TERM 2124 1977264 - 1977282 + g 71 -6.6 -4.22214 | GGGCAGCTTCACTGG CGCGCAGG GCA TCTTCGCG TTGTTTTCGCTCACT TERM 2125 1978843 - 1978821 - g 80 -12 -2.82623 | opp_overlap 1978819 1978818 1978822, overlap 1978818 CTCTCTCCATAAGTA CGGAGCCGAA ACG TTCGGCTCCT CGTCTTTTGTGCGTC TERM 2126 1978822 - 1978842 + G 100 -15.5 -2.98789 | opp_overlap 1978821 1978818, overlap 1978819 1978818 TCTCTCCATAAGTAC GGAGCCGAA ACG TTCGGCTCC TCGTCTTTTGTGCGT TERM 2127 1979235 - 1979209 - g 72 -5.8 -4.36914 | overlap 1979194 1979192 1979210 CGCTTCGGTACAAAA CGTGCGGGGTTA TGG TAACCCATCACA GAATTACCGTATTCG TERM 2128 1980745 - 1980735 - g 74 -6.8 -4.33165 | CTAAACTGACTAAAA CCCA AAA TGGG ACGAACAACGGTAAC fcuA 1978796 - 1981087 + | ferrichrome receptor protein TERM 2129 1981171 - 1981209 + T 100 -24.8 -3.00946 | opp_overlap 1981158 1981175, overlap 1981175 AACGGGTGCTTTACT GAAATCCCCCGGCGATTT GAT ATATCGCCGGGGGATTTC TCATTTATCGCGCAG TERM 2130 1981175 - 1981205 + T 100 -19.8 -4.17701 | opp_overlap 1981158 1981175, overlap 1981171 GGTGCTTTACTGAAA TCCCCCGGCGATTT GAT ATATCGCCGGGGGA TTTCTCATTTATCGC TERM 2131 1981205 - 1981175 - T 100 -19.8 -3.64703 | opp_overlap 1981175 1981171, overlap 1981158 GGTGCTTTACTGAAA TCCCCCGGCGATTT GAT ATATCGCCGGGGGA TTTCTCATTTATCGC yebN 1981833 - 1981264 - | hypothetical protein TERM 2132 1981527 - 1981538 + g 76 -2.2 -5.24449 | CCAACACCCAAAAAC TGTG ACTG CGCA TTTTTTCCGTTTCTG yobD 1982723 - 1982262 - | hypothetical protein TERM 2133 1982900 - 1982877 - R 100 -8.8 -4.89567 | opp_overlap 1982880, overlap 1982880 GTCTAAAAGATAAAA TAACCGGGAG CAAG CCCCCGGTTT TGGATGAAGATAATC TERM 2134 1982897 - 1982880 - R 100 -10.5 -4.52747 | opp_overlap 1982880, overlap 1982877 TAAAAGATAAAATAA CCGGGAG CAAG CCCCCGG TTTTGGATGAAGATA TERM 2135 1982880 - 1982897 + r 79 -8.3 -4.18494 | opp_overlap 1982877 1982880 TAAAAGATAAAATAA CCGGGAG CAAG CCCCCGG TTTTGGATGAAGATA manZ 1983810 - 1982923 - | mannose-specific PTS system protein IID TERM 2136 1983442 - 1983409 - G 73 -9.5 -3.33162 | overlap 1983385 TACGGTACCCCAGAA GATCGGGTCACCGAC ACCG GCCAGTGGCCCCATC AGACCCACTTTAATG manY 1984614 - 1983817 - | PTS system, mannose-specific IIC component manX 1985680 - 1984706 - | PTS system, mannose-specific IIAB component TERM 2137 1986636 - 1986650 + G 71 -6.4 -4.24384 | overlap 1986631 CGTCGGTGCGTTTAA TTTCGC TGG GCGAGA TTTGATTTTGCTGGT yoaE 1986391 - 1987935 + | CorC/HlyC family Mg+2/Co+2/heavy metal efflux pumps TERM 2138 1987949 - 1987976 + T 100 -17 -3.62046 | opp_overlap 1987943 AAGCAGAGAGTGGAA CCTCAGGGGCGC TTCG GCTCCCCTGAGG TTATTGACAACGTAC hpcR 1988504 - 1988037 - | homoprotocatechuate degradative operon repressor TERM 2139 1988462 - 1988452 - G 85 -4.6 -5.42862 | ATAGGCCGAAAAAAA GCCA TAG CGGC TTCACGAGCCTGCAA hpaG 1988892 - 1989524 + | putative 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase YPTB1638 1989521 - 1990285 + | 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase / 5-carboxymeth... TERM 2140 1991113 - 1991131 + G 73 -2.3 -5.06414 | CTCAATGGTGAACGT TGCACGG CGGGT TCGCGCA TTTTTATTCAAGAGA hpaE 1990282 - 1991748 + | 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase hpaD 1991867 - 1992724 + | 3,4-dihydroxyphenylacetate 2,3-dioxygenase hpaF 1992749 - 1993147 + | 5-carboxymethyl-2-hydroxymuconate delta-isomerase TERM 2141 1993754 - 1993742 - g 73 -10.5 -3.10344 | opp_overlap 1993749 GCGTGATTGAAGAGA GCGGC GTT GCCGC GGCGGTATTGAATCA hpaH 1993141 - 1993944 + | 2-oxo-hept-3-ene-1,7-dioate hydratase TERM 2142 1994020 - 1994003 - g 90 -2.7 -5.72207 | CTGAAAGCAAAAAAA CCACAAA TTGG CTTATGG CTAGGTTTGTGTAGC hpaI 1993955 - 1994761 + | 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase TERM 2143 1994855 - 1994840 - g 75 -3.2 -5.06414 | GCCGGTCAATAAAAA CACACC ATTA AGTGCG CAGCAGCAGTCCGTC hpaX 1994787 - 1996154 + | major facilitator superfamily 4-hydroxyphenylacetate symporter hpaB 1996222 - 1997784 + | 4-hydroxyphenylacetate 3-monooxygenase hpaC 1997805 - 1998302 + | 4-hydroxyphenylacetate 3-monooxygenase coupling protein TERM 2144 1998304 - 1998343 + T 100 -21 -3.62046 | opp_overlap 1998304 CGGTGATGGTGTAAA CCTCTAATGCCCGTCA TATTTAAC TGACGGGCATTAGAGG TTGTTGACAACGTGC TERM 2145 1998343 - 1998304 - T 100 -21 -3.55444 | opp_overlap 1998304 CGGTGATGGTGTAAA CCTCTAATGCCCGTCA TATTTAAC TGACGGGCATTAGAGG TTGTTGACAACGTGC TERM 2146 1998431 - 1998413 - T 100 -8.8 -4.82901 | opp_overlap 1998427 TTCCCTGCATAAAAA TAGCCCTC CCT GGGGGCTA GCCGCGCCATCCTTT TERM 2147 1998600 - 1998582 - T 78 -2.4 -5.47218 | overlap 1998586 TGTCAGCGAAAAAAA TCAAGTAC ACT GCACTTTA ATCGCCAGGCCACCA sdaA 1999946 - 1998582 - | L-serine dehydratase TERM 2148 1999513 - 1999501 - G 73 -5.5 -4.56607 | opp_overlap 1999505, overlap 1999505 TCATCAACGATAAAA CCACC GCC GATGG AGTAGTATGTTTTGC TERM 2149 2000243 - 2000263 + r 70 -7.5 -3.79993 | TTCTAGTTATTCAGC TACGGGGTC AAT GGCCCGGTA TATTTTGGTCTCTAA TERM 2150 2000630 - 2000645 + r 100 -11.8 -3.92373 | opp_overlap 2000630 TGTCACAGGTTAACA GCCGCC AAAT GGCGGC TTTATGAGTCAAATA TERM 2151 2000645 - 2000630 - R 86 -11.8 -3.07962 | opp_overlap 2000630 TGTCACAGGTTAACA GCCGCC AAAT GGCGGC TTTATGAGTCAAATA YPTB1648 2001253 - 2000654 - | hypothetical protein pabB 2002626 - 2001250 - | para-aminobenzoate synthase component I YPTB1650 2002791 - 2003048 + | hypothetical protein TERM 2152 2003111 - 2003138 + T 87 -8.5 -4.49958 | opp_overlap 2003111, overlap 2003115 ATTGATAGATAAAAA TAAACCCGCTG GCTGAA TGGCGGGTTTA TTTATTTGCTAGCGT TERM 2153 2003138 - 2003111 - T 89 -7.1 -5.04597 | opp_overlap 2003111 2003115 ATTGATAGATAAAAA TAAACCCGC TGGCTGAATG GCGGGTTTA TTTATTTGCTAGCGT TERM 2154 2003115 - 2003134 + T 74 -4.9 -4.80736 | opp_overlap 2003111, overlap 2003111 ATAGATAAAAATAAA CCCGCTG GCTGAA TGGCGGG TTTATTTATTTGCTA purT 2004355 - 2003174 - | phosphoribosylglycinamide formyltransferase 2 TERM 2155 2003314 - 2003354 + g 73 -9.8 -3.37975 | gap 1, overlap 2003335 ATAACCGAATCTGTG TATCGCCTATC-AGGGCAG TTTC CAGCCCGCGATAGGTGATA TTCTGGCTGGTCAGT dbpA 2004668 - 2006050 + | ATP-dependent RNA helicase DbpA YPTB1653 2006144 - 2006464 + | hypothetical protein YPTB1654 2006504 - 2006812 + | hypothetical protein YPTB1655 2006919 - 2007329 + | hypothetical protein TERM 2156 2007402 - 2007422 + F 72 -9.7 -2.83112 | opp_overlap 2007392 AATAACCCGCTATGT TTGAGGGCA TAT TGCCCTCCA TCTGGTCAATTCAAT ptrB 2007639 - 2009690 + | oligopeptidase B TERM 2157 2009934 - 2009951 + F 76 -10.5 -3.05384 | opp_overlap 2009934 ATGAACAATAAAAAA CCCGCCG ATAA TGGCGGG TTAACTCACGAAACG TERM 2158 2009951 - 2009934 - f 100 -9.8 -5.66229 | opp_overlap 2009934 ATGAACAATAAAAAA CCCGCC GATAAT GGCGGG TTAACTCACGAAACG pip 2010412 - 2011362 + | proline iminopeptidase holE 2011652 - 2011422 - | DNA polymerase III subunit theta TERM 2159 2012206 - 2012187 - g 70 -2.2 -5.00616 | gap 1, opp_overlap 2012172, overlap 2012190 TGCCTTTTTAAAAAA GCAT-TCTC AAG AAGAAATGC AACATATGGAACGTT ftnA 2012053 - 2012562 + | ferritin TERM 2160 2012583 - 2012611 + F 82 -8.1 -4.47456 | ATTGAGAAAATATTC GCCGCGGTACT ATTATTG GGTACGGCGGC TTTGTTGTTGCCTAT TERM 2161 2012634 - 2012646 + F 75 -3.3 -5.18715 | overlap 2012635 TTGCCTATCCCTCCC CGCGA TCC TCGCC TTTTCTTGTTTTTCT YPTB1660 2012941 - 2013327 + | putative copper resistance protein TERM 2162 2013379 - 2013405 + G 81 -12.4 -3.03903 | overlap 2013381 TTCTGCACTTTATGG CAGTGATGCTGA TGT TTGGCATCACTG TATTCACCGCCTTTT YPTB1661 2013330 - 2014214 + | putative copper resistance protein D yebY 2014296 - 2014652 + | hypothetical protein TERM 2163 2014881 - 2014908 + T 100 -7.8 -5.77856 | AGAGCCATTTCCCTA GACCGAATATCA GGAA TCGTATTCGGTC TTTTTTTAATTTATT TERM 2164 2015038 - 2015055 + T 70 -5.5 -4.57073 | ATGAGTCATTTTCAT CGACTTG TGGC CAAGCCG TTTTTGGGCGAACTG TERM 2165 2015168 - 2015151 - T 75 -8.4 -3.89336 | opp_overlap 2015150 TTAACCAAAGCGAAA CTGGGC AATTAA GCCCAG CCTATTTCAGTCATA YPTB1663 2015501 - 2015175 - | putative acyl carrier protein YPTB1664 2015953 - 2015495 - | hypothetical protein TERM 2166 2015691 - 2015704 + g 76 -2.3 -5.27476 | overlap 2015692 CATGTAGGTAGCGAC ATCCC AAAT GGGAA TTTTGTTTTCTTAAA TERM 2167 2017219 - 2017206 - g 70 -9.5 -3.21218 | ATTCGTCAGCAGCAA CGGGC GATG GCCCG TCGTCGGATGATGGT flhB 2016462 - 2017622 + | flagellar biosynthesis protein FlhB TERM 2168 2017900 - 2017888 - g 74 -9.1 -3.78775 | opp_overlap 2017887 2017884 GCGTCTATCACTAAA CGTGG CTT CCACG CGTATTATTCTGATG TERM 2169 2018183 - 2018171 - g 74 -2.6 -5.17576 | GATGAAGCGAAAAAA CGCC GCTCT GACG TTACGCAAGAGGCTG TERM 2170 2018629 - 2018616 - g 74 -6.7 -4.42062 | overlap 2018621 TACGTGGTAAACAAA CACAG CAGC CTGTG GCAGTAGAAGCACCC flhA 2017622 - 2019700 + | flagellar biosynthesis protein FlhA flhE 2019700 - 2020122 + | flagellar protein FlhE precursor YPTB1668 2020732 - 2023689 + | putative invasin TERM 2171 2023829 - 2023799 - T 93 -13.4 -2.64107 | opp_overlap 2023799, overlap 2023802 CAAATTCCCAGAGGA CAACGCCGCTCA GGTTAAT TGAACGGCGTTG TTTTTTAAAAGGATT TERM 2172 2023799 - 2023829 + T 100 -11.9 -5.01732 | opp_overlap 2023799 2023802 CAAATTCCCAGAGGA CAACGCCGCTCAG GTTAA TTGAACGGCGTTG TTTTTTAAAAGGATT TERM 2173 2023826 - 2023802 - T 76 -9.3 -3.4678 | opp_overlap 2023799, overlap 2023799 ATTCCCAGAGGACAA CGCCGCTCA GGTTAAT TGAACGGCG TTGTTTTTTAAAAGG flgN 2024309 - 2023869 - | flagella synthesis protein FlgN flgM 2024630 - 2024328 - | anti-sigma28 factor FlgM flgA 2025479 - 2024781 - | flagellar basal body P-ring biosynthesis protein FlgA flgB 2025718 - 2026131 + | flagellar basal body rod protein FlgB TERM 2174 2026343 - 2026360 + G 70 -7.7 -3.88498 | overlap 2026344 TGCTCAGATAGTTGA TGATCCG TCAC CGGATCG TTTGGTGTATCAGCC flgC 2026137 - 2026541 + | flagellar basal body rod protein FlgC flgD 2026556 - 2027242 + | flagellar basal body rod modification protein TERM 2175 2027661 - 2027685 + G 80 -4.9 -5.1287 | overlap 2027662 2027663 CCACTAATCGTCGTT TGGATCTGGCT ATC AGCCAGAACGG TTTTTTCCGTATGCA flgE 2027444 - 2028730 + | flagellar hook protein FlgE flgF 2028752 - 2029507 + | flagellar basal body rod protein FlgF TERM 2176 2029897 - 2029913 + G 70 -9.5 -3.18264 | ATGGCTCTTTCCAGG TTGACCA GAA TGGTCAA TTAGTCACTGCAGGC flgG 2029533 - 2030315 + | flagellar basal body rod protein FlgG TERM 2177 2030352 - 2030318 - f 72 -9.8 -2.74144 | overlap 2030317 GGCTCAGCTGTAAAC CTGCTTTCGGGGGGCA TCA TGCCCCCTGATCGCCG CAGCATAATAGGTCT flgH 2030459 - 2031148 + | flagellar basal body L-ring protein flgI 2031163 - 2032272 + | flagellar basal body P-ring protein flgJ 2032272 - 2033216 + | peptidoglycan hydrolase TERM 2178 2034401 - 2034384 - g 73 -9.9 -3.38178 | GAACCAATTCCAGAA CGCAGAT AAAT ATCTGCG GGATATGGATGACGG TERM 2179 2035367 - 2035382 + G 71 -8.2 -3.76402 | opp_overlap 2035359 GTAAAACCACCTTGT CCGGTG CTTA CGCCGG TTTAGTCAGTAACGT flgK 2033944 - 2035608 + | flagellar hook-associated protein FlgK TERM 2180 2036377 - 2036367 - g 83 -4 -5.40072 | TGCTGCGGAAAAAAA TATC TTT GATA CCATTGATACGGTAC flgL 2035714 - 2036727 + | flagellar hook-associated protein FlgL YPTB1683 2037733 - 2036756 - | putative transcriptional regulatory protein YPTB1684 2037975 - 2040041 + | short chain dehydrogenase TERM 2181 2041086 - 2041099 + G 87 -6.7 -5.0133 | AGTACCTTTACTTTT CTGGA CGTC TCCAG TTTTTTCCGCGACTG YPTB1685 2040189 - 2041229 + | ABC sugar transporter, permease subunit TERM 2182 2042083 - 2042109 + G 93 -14.4 -3.4252 | opp_overlap 2042079 2042078 2042076 ATCCTAAAGATGCCA GCCTGGCGATGG ATA CCGTCGCCAAGC TTCTGCTCGATAAAA TERM 2183 2042141 - 2042127 - g 85 -5.6 -5.24129 | CTGCTCGATAAAAAA CCCCTC ACT GATGGG ATGAATCTGGGGGTG YPTB1686 2041272 - 2042267 + | ABC transporter, periplasmic sugar-binding protein YPTB1687 2042333 - 2043910 + | ABC sugar transporter, ATP-binding subunit YPTB1688 2043913 - 2044935 + | ABC sugar transporter, permease subunit YPTB1689 2044984 - 2045943 + | putative sugar kinase YPTB1690 2046608 - 2046009 - | hypothetical protein TERM 2184 2046157 - 2046139 - G 74 -3 -5.02074 | opp_overlap 2046139, overlap 2046140 TTACCTTCTAAAAAA GCGGCTCT AAC AGAGTCGA ATGGTTTTCCTTCTT TERM 2185 2046720 - 2046738 + r 79 -3 -5.25656 | overlap 2046735 AACAAGTAGTTGAAA TCGCTCTT CCG GGGTGCGA TTTTTTGCTGATTTT fliR 2047863 - 2047081 - | flagellar biosynthesis protein FliR TERM 2186 2047149 - 2047126 - G 79 -10.4 -3.61715 | opp_overlap 2047128 CAGGCGGTCGAAGAA TTCACCAAAC AGGT GTTCGGTGAA AGGGGCTAACAATGG fliQ 2048135 - 2047866 - | flagellar biosynthesis protein FliQ fliP 2048981 - 2048241 - | flagellar biosynthesis protein FliP fliO 2049430 - 2049062 - | flagellar protein FliO TERM 2187 2049441 - 2049415 - G 81 -12.2 -3.02144 | opp_overlap 2049413 2049412 CCACCTGCGTTAACA CCCCCCCTGC AGGCATG GCCGGGGGGG CGGCGCTTGATTGCG fliN 2050074 - 2049658 - | flagellar motor switch protein FliN TERM 2188 2049962 - 2049981 + g 75 -3.4 -5.1485 | overlap 2049966 AGCGATTTAAAGACG CCTTCGGT TGTG GCCGTGGG TTTTTCTGTTGCTTG fliM 2051072 - 2050071 - | flagellar motor switch protein FliM TERM 2189 2050741 - 2050751 + g 77 -8.2 -4.18018 | opp_overlap 2050734 ACGAATAGCGCAGTA CCGC GTA GCGG TTTTAGATGCACCAG fliL 2051548 - 2051078 - | flagellar basal body-associated protein FliL fliK 2053186 - 2051834 - | flagellar hook-length control protein FliK fliJ 2053629 - 2053183 - | flagellar biosynthesis chaperone fliI 2055105 - 2053705 - | flagellum-specific ATP synthase fliH 2055821 - 2055105 - | flagellar assembly protein H fliG 2056806 - 2055814 - | flagellar motor switch protein G fliF 2058515 - 2056803 - | flagellar MS-ring protein TERM 2190 2058379 - 2058361 - G 78 -11 -3.3573 | overlap 2058350 TAAAGGACGCGATAA TCCGGGCT TTT AGCCCAGA GCATCAAGGCGACAA TERM 2191 2058962 - 2058945 - g 80 -4.7 -5.14563 | overlap 2058946 2058947 GGGGTCAGCAAAAAA CCTGCCC GCAG AGGCGGG CTTCGCCAGTGAACT fliE 2058868 - 2059179 + | flagellar hook-basal body protein FliE YPTB1705 2059345 - 2059512 + | putative phage minor tail protein YPTB1706 2059537 - 2059842 + | hypothetical protein TERM 2192 2060048 - 2060062 + T 74 -10 -3.14931 | opp_overlap 2060014, overlap 2060014 TTCGAACTGTCTGCT GCTCTC ATC GAGAGC TTAATCCAGAATCAC TERM 2193 2060348 - 2060363 + T 80 -6.1 -4.8066 | opp_overlap 2060348 CGTATGAGATATCAA CCCAC TTAGCT GTGGG TTTTTGCGTTATCTT YPTB1708 2061125 - 2060514 - | putative DNA-3-methyladenine glycosidase YPTB1709 2064240 - 2061286 - | putative chemotactic transducer-related protein TERM 2194 2062366 - 2062379 + g 93 -6.7 -5.38549 | TTTACTCTCCATCGC TGCTC TGGC GAGCA TTTTTGTTATTTCAG TERM 2195 2063504 - 2063515 + g 70 -2.2 -4.90778 | opp_overlap 2063494, overlap 2063493 2063501 ATAATCGCCTGGCTG CCTG GTGG TAGG TTTTGTTTAGCTAAA TERM 2196 2063894 - 2063882 - G 100 -4.7 -5.80817 | overlap 2063883 CGCAACATAAAAAAA TCCCC ATT GGGGT AAGCGCTGTATACGG TERM 2197 2063893 - 2063883 - G 76 -8.2 -4.06863 | overlap 2063882 GCAACATAAAAAAAT CCCC ATT GGGG TAAGCGCTGTATACG TERM 2198 2064428 - 2064417 - R 70 -5.8 -4.40561 | opp_overlap 2064401 CGGCCTTAAAAAGAA CGCT TTAA AGCG CAAAATATCTAAAAG YPTB1710 2065469 - 2064594 - | AraC family transcriptional regulator TERM 2199 2065561 - 2065548 - R 82 -3.1 -5.46657 | TATTTTAATAAAAAA CTTAC CATA GCAAG CCACTTCGACTATAA fliT 2066132 - 2065770 - | flagellar biosynthesis protein FliT TERM 2200 2065842 - 2065829 - G 70 -9.5 -3.25729 | opp_overlap 2065828 2065836 CATAAGTACGATTAA CCGCC TGTT GGCGG GTAGATTGCCCCACC fliS 2066541 - 2066143 - | flagellar protein FliS TERM 2201 2066441 - 2066427 - G 81 -12.8 -2.71144 | opp_overlap 2066417, overlap 2066415 TACGTGCGCGAATCA GGGCGC TTT GCGCCC CATCGAACAGCATCA fliD 2067952 - 2066552 - | flagellar capping protein fliC 2068249 - 2069358 + | flagellin TERM 2202 2069387 - 2069402 + F 91 -8.2 -4.69027 | overlap 2069399 ATACCCTTATCCCAA CCCTGC TCCG GCGGGG TTTTTACCTCAGTTT TERM 2203 2069533 - 2069523 - f 81 -5.4 -5.10064 | GGGAACAGATAAAAA TCAG ACG CTGA GAATGCGCTTCAAGG fliA 2069705 - 2070427 + | flagellar biosynthesis sigma factor TERM 2204 2070700 - 2070685 - g 73 -2.4 -5.09225 | opp_overlap 2070686, overlap 2070686 ACTCCAGTTAAAAAA GCGGCC GCTG AGCCGT TATTTAAAAGATTAT fliZ 2070662 - 2071171 + | protein FliZ YedO 2071460 - 2072452 + | D-cysteine desulfhydrase fliY 2072576 - 2073376 + | cystine transporter subunit TERM 2205 2073395 - 2073414 + G 100 -12.2 -5.06816 | opp_overlap 2073394 CAGAAAGTATGCAAT TGGTGCTG GATT CAGCACCA TTTTTATTGAAGGGT yecS 2073376 - 2074038 + | putative amino-acid ABC transporter (permease) yecC 2074041 - 2074802 + | putative amino-acid ABC transporter ATP-binding protein YecC TERM 2206 2074879 - 2074853 - T 84 -10.1 -3.82218 | gap 1, opp_overlap 2074862, overlap 2074854 2074869 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 2207 2074880 - 2074854 - T 72 -10.1 -2.88849 | gap 1, opp_overlap 2074862, overlap 2074853 2074869 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT TERM 2208 2074959 - 2074973 + T 88 -10 -4.18018 | opp_overlap 2074953 TGTCAATAACCTCAA CCACTG ATC CAGTGG TTTTCGGTGGCAAAA TERM 2209 2075055 - 2075079 + T 100 -12.2 -3.78312 | opp_overlap 2075053 GGCATTTTTAATATG TTGGGGGCCA CGGTA TGGTCCCCAA TTTGCTAGATAATTT YPTB1721 2075465 - 2075094 - | hypothetical protein YPTB1722 2075800 - 2075465 - | hypothetical protein TERM 2210 2076223 - 2076210 - R 83 -9.5 -4.07568 | opp_overlap 2076210 TGTTGGTTGGCAAAA GGCCC CGAA GGGCC TTAATTGATAAACCG TERM 2211 2076210 - 2076223 + r 74 -9.5 -3.39895 | opp_overlap 2076210 TGTTGGTTGGCAAAA GGCCC CGAA GGGCC TTAATTGATAAACCG putA 2080267 - 2076296 - | trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase TERM 2212 2078041 - 2078018 - G 73 -9.6 -3.28745 | opp_overlap 2078038, overlap 2078021 GGCGTAATAATGCAA GAAGTCCACG GCTT CACGGACTTC GGCGATGGCATTACT TERM 2213 2079835 - 2079846 + g 76 -2.2 -5.26875 | gap 1, overlap 2079826 GTACCATGCCCGCGC G-GCC ATG GGCAC TTTTTTGATTACGCA TERM 2214 2082220 - 2082234 + G 74 -4.2 -4.91109 | overlap 2082222 TTCCAGGCTTCTTGT TTGCCA GTT TGGCTA TTTTTGTCGTCAGCC putP 2080839 - 2082323 + | SSS family proline symporter TERM 2215 2082363 - 2082392 + F 73 -8.6 -3.59698 | opp_overlap 2082365 2082367, overlap 2082365 ATACGTTTAACTACA CATAGCCTCCTG CCATAA CAGGGGGCTATC TTGTATGTAAAATCA TERM 2216 2082390 - 2082365 - f 73 -9.7 -3.00476 | opp_overlap 2082363 2082365, overlap 2082367 ACGTTTAACTACACA TAGCCTCCTGC CATA ACAGGGGGCTA TCTTGTATGTAAAAT TERM 2217 2082365 - 2082390 + F 81 -11.2 -3.37466 | opp_overlap 2082365 2082367, overlap 2082363 ACGTTTAACTACACA TAGCCTCCTG CCATAA CAGGGGGCTA TCTTGTATGTAAAAT YPTB1725 2082647 - 2083504 + | oxidase dependent Fe+2 transporter TERM 2218 2084018 - 2083996 - g 76 -8.4 -4.08485 | GTCAGCCAAACCAAA GCGTTCACCG ATG CAGTGAAGGC TGGGGATCTGGCACT YPTB1726 2083534 - 2084658 + | hypothetical protein TERM 2219 2084702 - 2084682 - g 100 -12.5 -4.63586 | overlap 2084683 2084694 ACATGAGAGACAAAA CCGGCCCGA AAT TCGGGCCGT ATCAACCGGATGATG TERM 2220 2084701 - 2084683 - g 100 -16 -3.37067 | overlap 2084682 2084694 CATGAGAGACAAAAC CGGCCCGA AAT TCGGGCCG TATCAACCGGATGAT TERM 2221 2084727 - 2084742 + G 73 -7.5 -4.20136 | overlap 2084725 ATGATGAGGCGGTGT CGCCG TCACGT CGGCG TTTAATTTTAGGGAT TERM 2222 2085487 - 2085472 - g 78 -9 -4.00042 | CTGGGTATCAAATAA TGCAGG CGAG CCTGCA TGGGCGGTAGGGGGA YPTB1727 2084669 - 2085973 + | hypothetical protein TERM 2223 2085980 - 2086002 + T 91 -7.7 -4.8667 | opp_overlap 2085978 2085976 2085980 GAAGCTTAAAATACA GCACCGC CATCATCGC GCGGTGC TTTTTATGACGTCTA wrbA 2086658 - 2086059 - | TrpR binding protein WrbA TERM 2224 2086736 - 2086691 - H 80 -9.9 -3.69684 | gap 1, opp_overlap 2086698 AAATTTATTGAATAA GGCTGAT-GATGTCATTAGTCG TCG CGGCTAATGACACCTATTAACC ATAAGCTAATCAGCA TERM 2225 2086698 - 2086728 + H 100 -13.4 -3.04263 | opp_overlap 2086691 TTGAATAAGGCTGAT GATGTCATTAGTCG TCG CGGCTAATGACACC TATTAACCATAAGCT YPTB1729 2087052 - 2088230 + | hypothetical protein TERM 2226 2088344 - 2088310 - T 100 -17.4 -4.17657 | opp_overlap 2088315, overlap 2088315 GATTAGAGGGGAAAA TAAAACGGTACCAGAA CAC CTCTGGCACCGTTTTA TCACACTGTGGTTAT TERM 2227 2088315 - 2088339 + T 93 -10 -4.39426 | opp_overlap 2088315 2088310 GAGGGGAAAATAAAA CGGTACCAGA ACACC TCTGGCACCG TTTTATCACACTGTG TERM 2228 2088339 - 2088315 - T 100 -12.9 -5.09259 | opp_overlap 2088315, overlap 2088310 GAGGGGAAAATAAAA CGGTACCAGAA CAC CTCTGGCACCG TTTTATCACACTGTG cycA 2089780 - 2088356 - | D-alanine/D-serine/glycine permease TERM 2229 2088503 - 2088491 - G 78 -6.2 -4.73614 | CAGTACCAAAACAAA GGCG AAAAA CGCC ATACAAACCCATGAC TERM 2230 2088537 - 2088526 - G 73 -2.2 -5.00895 | opp_overlap 2088536 CCCATGACATAAAAA TACC GGCT GGCA TTTTGTAGATGGATT ail 2090895 - 2091446 + | attachment invasion locus protein TERM 2231 2091472 - 2091498 + F 85 -5.9 -5.18357 | gap 1, overlap 2091485 TCTATATAATAATAA CAGCCGTATTAG TTCA CTG-TGCGGCTG TTTTTTCATCAGTTG YPTB1732 2091786 - 2092040 + | hypothetical protein ydgC 2092412 - 2092068 - | hypothetical protein YPTB1734 2092761 - 2092537 - | hypothetical protein TERM 2232 2092649 - 2092668 + g 71 -8.6 -3.64822 | gap 1, overlap 2092652 AAGATTACTTTCCCA GC-ATCGGC TTG GCCGATCGC TTTCAGTAACAGAGT TERM 2233 2093164 - 2093174 + H 78 -4 -5.14477 | opp_overlap 2093149 2093164 TTAACTTATCTAAAG CTAA TAA TTAG TTTTTTGAATGTATG TERM 2234 2093622 - 2093635 + GH 73 -5.3 -4.57569 | opp_overlap 2093622 2093620, overlap 2093602 GGGTTGGAAGCAACA CGTAA AATT TTACG TTTTTCGCCGGATAC uvrY 2093424 - 2094080 + | response regulator uvrC 2094052 - 2095905 + | excinuclease ABC subunit C pgsA 2095964 - 2096512 + | phosphatidylglycerophosphate synthetase TERM 2235 2096699 - 2096683 - T 76 -10.9 -2.62616 | TCAGTTGGTAGAGCA CGACCTT GCC AAGGTCG GGGTCGCGAGTTCGA TERM 2236 2096914 - 2096894 - T 76 -10.5 -2.90714 | opp_overlap 2096893, overlap 2096897 TGAAATCGGTAGACA CAAGGGATT TAA AATCCCTCG GCTTATGGCTGTGCG TERM 2237 2096911 - 2096897 - T 73 -8.6 -3.5947 | opp_overlap 2096893, overlap 2096894 AATCGGTAGACACAA GGGATT TAA AATCCC TCGGCTTATGGCTGT TERM 2238 2097001 - 2097014 + T 100 -9.5 -6.02919 | CGAGTATGTCGTTAA CCGCC GAGA GGCGG TTTTTTTGTTTCTGA TERM 2239 2097183 - 2097197 + T 72 -10 -2.83788 | opp_overlap 2097183, overlap 2097182 TTTGATATAAAAAAA CCTGCA ATT TGCAGG CTTCTTCAATTACAT TERM 2240 2097197 - 2097183 - T 100 -10 -5.71712 | opp_overlap 2097183 2097182 TTTGATATAAAAAAA CCTGCA ATT TGCAGG CTTCTTCAATTACAT ogrK 2097422 - 2097207 - | DNA-binding transcriptional regulator YPTB1739 2098680 - 2097514 - | D protein bacteriophage 186 and P2 TERM 2241 2097754 - 2097768 + g 83 -7 -4.66609 | overlap 2097756 CCACTTGGACTGGGC GGCGCG CAT CGCGGC TTTTTGCGTGGCGTA TERM 2242 2098657 - 2098633 - G 71 -6.3 -4.23281 | AATATTCAACATAAA GTCCGGGGC CATATCC GCCCCAGCC GGGAGTGAAATGCCG YPTB1740 2099162 - 2098677 - | putative phage tail protein TERM 2243 2098865 - 2098851 - G 95 -8.6 -5.1861 | opp_overlap 2098853, overlap 2098856 GCCATCAGCAAAAAA CAGACT GCG AGTCTG GCTTAAACTCTCAAC YPTB1741 2101588 - 2099162 - | putative bacteriophage P2 tail protein gpT TERM 2244 2099986 - 2099996 + g 76 -2.4 -5.27335 | TGGTGAGAGTCGCGA CCAG CTC CGGG TTTTTCTTTGCCCAG TERM 2245 2100869 - 2100886 + g 80 -8.4 -4.39347 | overlap 2100879 2100881 GATATCTCGCGCTTG CTGGCG AATGGC CGCCAG TTTTGCGTCTTTTTT TERM 2246 2100879 - 2100895 + g 76 -2.1 -5.24129 | overlap 2100869 2100881 GCTTGCTGGCGAATG GCCGCCA GTT TTGCGTC TTTTTTATCCAGACC YPTB1742 2101703 - 2101581 - | phage protein YPTB1743 2102047 - 2101736 - | putative tail protein gpE P2 bacteriophage TERM 2247 2101779 - 2101764 - G 76 -2.5 -5.24129 | TTCGGCGACAAAAAA CCGAT CACCCT ACCGG CCAGCGCCACTAAAT YPTB1744 2102613 - 2102098 - | putative tail tube protein FII (bacteriophage P2) YPTB1745 2103796 - 2102627 - | putative tail sheath protein (P2 and 186 bacteriophage) TERM 2248 2103490 - 2103513 + g 71 -9 -3.59087 | gap 1, overlap 2103492 GGCCGTTCTCGTCAG C-ACCACCAAT AAT ATTGGTGGTAG TTTCAGCCTCATCTT TERM 2249 2103492 - 2103510 + g 76 -11.8 -2.91873 | overlap 2103490 CCGTTCTCGTCAGCA CCACCAAT AAT ATTGGTGG TAGTTTCAGCCTCAT TERM 2250 2103692 - 2103674 - G 71 -8.8 -3.66178 | GGTGTTAAGGGGAAA TGTTGCCG CGT CGGCATCA TCGCTGGTACAGACC TERM 2251 2103896 - 2103911 + r 81 -11.8 -2.54523 | opp_overlap 2103896 TGGTACAACGAAAAA GCCCCG CAAT CGGGGC TAAGTTGAAATATCA TERM 2252 2103911 - 2103896 - R 100 -11.8 -4.93365 | opp_overlap 2103896 TGGTACAACGAAAAA GCCCCG CAAT CGGGGC TAAGTTGAAATATCA YPTB1746 2104406 - 2103924 - | hypothetical protein YPTB1747 2105857 - 2104418 - | hypothetical protein YPTB1748 2106462 - 2105854 - | putative bacteriophage protein YPTB1749 2107363 - 2106455 - | bacteriophage protein YPTB1750 2107718 - 2107368 - | phage-related protein YPTB1751 2108356 - 2107715 - | putative phage-related baseplate assembly protein TERM 2253 2108390 - 2108367 - R 79 -11 -3.02745 | opp_overlap 2108366 2108367, overlap 2108364 TTCATGCAGAAAGGA TGCCGCCCAA CAGG TCAGGCGGCA ATTCGTGCGGGTTTG YPTB1752 2108879 - 2108430 - | prophage tail completion protein YPTB1753 2109331 - 2108876 - | phage tail completion protein GpR TERM 2254 2109075 - 2109065 - G 77 -8.2 -4.25056 | opp_overlap 2109064 2109065 GACCTTATGAATAAA GCCG GTG CGGC GCTTTTCTTCTGTCG TERM 2255 2109441 - 2109460 + r 71 -9.2 -3.04144 | GTTAACCGCCGGGCT GCTGCCCG GTAG CGGGCAAC TGTTCACCGTCGGAC YPTB1754 2109843 - 2109427 - | putative Orf27; P2 LysB homolog; control of lysis [Ente... YPTB1755 2110351 - 2109845 - | putative phage lysozyme TERM 2256 2109997 - 2109980 - G 79 -3.4 -5.24129 | gap 1 CTTGTTGACAAAAAA TGCCAGC GTCGA GC-GGCA AGCAGCGCCGGGGCC YPTB1756 2110556 - 2110335 - | prophage Hp1 family holin TERM 2257 2110446 - 2110428 - G 82 -12.4 -3.18118 | overlap 2110426 2110424 CCAGTTGATAAGACA GGTAGCCG CAG CGGCCACC GCAGCCACATAAAAC YPTB1757 2110750 - 2110547 - | putative phage-related tail protein YPTB1758 2111223 - 2110750 - | phage head completion protein GpL YPTB1759 2111982 - 2111323 - | prophage small terminase subunit TERM 2258 2111908 - 2111925 + g 87 -12.7 -3.28791 | overlap 2111894 GCCTGTGGCGTGGCG CAGCGGG TTAT CCCGCTG TTGTGAAGCGGCAAT YPTB1760 2113224 - 2111986 - | major capsid protein TERM 2259 2112131 - 2112147 + g 91 -6.5 -5.26316 | overlap 2112133 AGACCATCGTAGTTA GGTGCGT CAG ACGCAGC TTTTTTATCCGCTCC TERM 2260 2112444 - 2112460 + g 80 -8.7 -4.37067 | opp_overlap 2112438 2112436 2112435, overlap 2112436 TGATAATCAGGTCAG CAGCGAG GGT TTCGCTG TTTTCCTGCTCTTTG TERM 2261 2113123 - 2113134 + g 80 -3 -5.46657 | TTGTGTGACAGAGGG TTCA ACGC TGAA TTTTTTATTCAGGTC YPTB1761 2114155 - 2113301 - | V protein bacteriophage 186 TERM 2262 2114262 - 2114233 - H 100 -12.2 -4.09805 | GCAGCAACAACGAAA GCCAGTTGTGAC GGGGCT GGCACAACTGGC AGGGCGCGCAGAGGG TERM 2263 2114352 - 2114372 + G 90 -9 -4.52589 | overlap 2114346 CCACGGCGACAGGCG GCCTTGCT TTACT GGCAAGGC TTTTCTGTGCGCCAG YPTB1762 2114304 - 2116076 + | phage terminase subunit GpP TERM 2264 2116166 - 2116155 - g 75 -5.8 -4.4891 | TTGATTATCAGAAAA CGTG GTAT CACG TGGGGCAGACCAGCA YPTB1763 2116073 - 2116837 + | hypothetical protein TERM 2265 2116939 - 2116904 - g 75 -11.9 -2.62522 | gap 1, opp_overlap 2116906, overlap 2116886 2116903 CCAGTCAACAGCAAC CGGTGGAGGCGTTCAC TTTTG GCGAAC-CCTCCGCCG TGCTCGATAAGCGGG YPTB1764 2116834 - 2117871 + | putative capsid portal protein TERM 2266 2118635 - 2118606 - T 100 -15.3 -4.59109 | opp_overlap 2118610, overlap 2118610 TATATGTTGTAAAAA TAAACCATTGTGA CGCG TCACAATGGTTTA ACTGCGCTAAGTAAT TERM 2267 2118610 - 2118631 + T 90 -11.7 -3.65902 | opp_overlap 2118606 2118610 TGTTGTAAAAATAAA CCATTGTGA CGCG TCACAATGG TTTAACTGCGCTAAG TERM 2268 2118631 - 2118610 - T 100 -11.7 -4.85782 | opp_overlap 2118610, overlap 2118606 TGTTGTAAAAATAAA CCATTGTGA CGCG TCACAATGG TTTAACTGCGCTAAG YPTB1765 2118982 - 2118623 - | hypothetical protein YPTB1766 2121287 - 2119005 - | putative phage P2 replication protein YPTB1767 2121546 - 2121274 - | hypothetical protein YPTB1768 2121923 - 2121612 - | gpB bacteriophage P2 YPTB1769 2122639 - 2122130 - | regulatory protein CII bacteriophage 186 YPTB1770 2122891 - 2122694 - | prophage regulator YPTB1771 2122962 - 2123573 + | CI repressor of phage 186 and others YPTB1772 2123601 - 2124872 + | hypothetical protein YPTB1773 2124872 - 2125750 + | hypothetical protein YPTB1774 2125870 - 2126925 + | putative integrase YPTB1775 2126922 - 2127968 + | hypothetical protein TERM 2269 2128246 - 2128259 + T 100 -9.5 -5.71983 | CGAGTATGTCGTTAA CCGCC GAGA GGCGG TTTTTTTGTGATTAA YPTB1776 2129325 - 2128303 - | putative integrase TERM 2270 2129582 - 2129562 - R 88 -11.1 -3.78775 | opp_overlap 2129560 2129562 TTCCTCAGTAGGAAA GGACGCAAC GAT GCTGCGCCC TATTATGGTCGTTTG YPTB1777 2130148 - 2129645 - | hypothetical protein TERM 2271 2129733 - 2129719 - G 71 -8.6 -3.69373 | opp_overlap 2129728 CAAATATCGGAAGAA CACCAA CAT TTGGTG CCCAGTTTCGGGCTA YPTB1778 2130580 - 2130242 - | hypothetical protein YPTB1779 2131575 - 2130712 - | hypothetical protein YPTB1780 2132170 - 2131934 - | hypothetical protein YPTB1781 2132835 - 2132407 - | hypothetical protein YPTB1782 2133971 - 2132832 - | hypothetical protein TERM 2272 2133870 - 2133853 - G 74 -11.3 -2.96321 | overlap 2133848 2133867 TTGAGTAAAACAGTA GCGCTCT CGAT AGAGCGC TGTGCGGTGCCGGTA YPTB1783 2135620 - 2134016 - | hypothetical protein TERM 2273 2134048 - 2134080 + g 81 -10.8 -3.68529 | gap 2, overlap 2134052 2134053 AATAGCGGATCCGAC CAGCTTTTACCGCCTG GTA CAGGCGGTAAA--CTG TTTCAGTAGTAAGAT TERM 2274 2134052 - 2134078 + g 91 -13.8 -3.42395 | overlap 2134048 2134053 GCGGATCCGACCAGC TTTTACCGCCTG GTA CAGGCGGTAAAC TGTTTCAGTAGTAAG TERM 2275 2134053 - 2134077 + g 100 -17.3 -2.65116 | overlap 2134052 2134048 CGGATCCGACCAGCT TTTACCGCCTG GTA CAGGCGGTAAA CTGTTTCAGTAGTAA TERM 2276 2134145 - 2134155 + g 81 -3.2 -5.41941 | overlap 2134141 TGCAATCAGGTCAAC TGGC GTT GCTA TTTTTGTTTCATTTG TERM 2277 2134279 - 2134291 + g 89 -6.2 -5.2166 | TTGTGACCGCTGCGG CGGC CAGTT GCCG TTTTTTCAATTCTTC YPTB1784 2136449 - 2135607 - | hypothetical protein TERM 2278 2136720 - 2136741 + r 100 -10.8 -4.89838 | overlap 2136711 2136710 CGCACTCCTGGGATA GCCCCGGC TTAATC GCTGGGGC TTTTCTCTTTATTGG YPTB1785 2137088 - 2136750 - | hypothetical protein YPTB1786 2137598 - 2137092 - | hypothetical protein TERM 2279 2138414 - 2138465 + r 100 -18.8 -3.32294 | overlap 2138417 CATAGTAGTTCTCAG TGAGTGGTTTTGCCGAAGCCCCCG CGTA CAGGGGCAGCGGTAAAACCACTTA TTCGTCGTCTTTCTT TERM 2280 2138417 - 2138462 + r 100 -18.3 -3.78156 | overlap 2138414 AGTAGTTCTCAGTGA GTGGTTTTGCCGAAGCCCCCG CGTA CAGGGGCAGCGGTAAAACCAC TTATTCGTCGTCTTT YPTB1787 2138732 - 2138463 - | hypothetical protein TERM 2281 2138781 - 2138758 - R 100 -13.2 -5.89947 | TAAAGGTAAAAAAAA GAGCCACAGC CTAA GCTGTAGCTC CGATGGTTTGACTTT YPTB1788 2139062 - 2138817 - | hypothetical protein YPTB1789 2139957 - 2139340 - | hypothetical protein YPTB1790 2140654 - 2139968 - | putative prophage repressor protein YPTB1791 2140734 - 2141024 + | hypothetical protein TERM 2282 2141079 - 2141060 - g 79 -11.4 -3.23979 | opp_overlap 2141061, overlap 2141073 2141074 ACCACAATTTATCAA CCTGCCGC TATA ACGGCAGG GGCTGCGATAGCATC TERM 2283 2141152 - 2141137 - g 74 -9 -3.61889 | CAAAAAGGTGGGAAA GAACGG TTTA CCGTTC CATACCGTGCGTGAA YPTB1792 2141042 - 2141404 + | hypothetical protein TERM 2284 2142020 - 2141965 - g 85 -13.4 -2.91264 | gap 1, opp_overlap 2141981, overlap 2141969 2142008 2142009 GCCCTGATGGAGATA GCAACTTGCCCCCATCC-ATTAGTGCA GAT TGCCCCCATCAGAAGGGGGCAAATTGC CCTGATGTTCATACA TERM 2285 2141981 - 2142027 + G 100 -15.2 -3.14881 | opp_overlap 2141969 2141965 2142008 2142009 CAACTTGCCCCCATC CATTAGTGCAGATTGCCCCCAT CAG AAGGGGGCAAATTGCCCTGATG TTCATACAGAGATTA YPTB1793 2141589 - 2142434 + | hypothetical protein YPTB1794 2142438 - 2143214 + | hypothetical protein TERM 2286 2143386 - 2143372 - g 79 -10 -3.91798 | CAATGGGTAACGAAA GCGCAA CGC TTGCGC ATGTGGCTAACAAGC rdgC 2143218 - 2144354 + | recombination associated protein YPTB1796 2144354 - 2144701 + | hypothetical protein TERM 2287 2145239 - 2145216 - g 78 -8.9 -4.08939 | gap 1, opp_overlap 2145216, overlap 2145229 TAAGAGTGACAGAAA TCGC-GGCAG GATAT CTGCCCGCGA TAACTTCAAGCGGGA YPTB1797 2144698 - 2145624 + | putative DNA methyltransferase TERM 2288 2146123 - 2146135 + G 71 -6.9 -4.26344 | ATAACACTCAAGTTG CCTGC AAT GCGGG TTTTGGTGCGGCTAT TERM 2289 2146214 - 2146229 + G 71 -4.6 -4.57073 | opp_overlap 2146198, overlap 2146193 CCGTGAGCAATTACT TGCCAC TGGT GAGGCA TTTTTAGCGCAGATC yfdM 2145621 - 2146496 + | hypothetical protein YPTB1799 2146493 - 2148238 + | putative modification methylase YPTB1800 2148235 - 2148882 + | putative phage protein TERM 2290 2148934 - 2148911 - f 90 -10.9 -4.00868 | GCATTTAGAAGCAAA GCCCTGCGC GATTCT GCGCGGGGC CAATGCTGCACGCTC YPTB1801 2149276 - 2150211 + | hypothetical protein YPTB1802 2150208 - 2150666 + | hypothetical protein TERM 2291 2150812 - 2150797 - f 76 -2.5 -5.25803 | opp_overlap 2150802, overlap 2150800 AAGCTTTAGAAAAAA GAGCC GAGTAT GACTC TGATTATAAAGTTGC TERM 2292 2150972 - 2150942 - f 100 -11.3 -4.59117 | AAATGAACTATAAAA TCAGTCCTGTG AATTTAAAA CACAGGACTGA CCAATATGACCACTG YPTB1803 2150978 - 2151787 + | hypothetical protein TERM 2293 2151835 - 2151861 + F 100 -9.5 -5.5112 | gap 1, opp_overlap 2151834 AATTACACAAAGATG CCGGAGTATGCT TAAA AGC-TGCTCCGG TTTTTTATTGGTCAG TERM 2294 2151927 - 2151904 - f 75 -8.9 -3.727 | gap 1, opp_overlap 2151904 CTGACTACACCCAAA GCCTGCATGG TTCGC CCA-GCAGGC TTTTTTATTTCCCCA TERM 2295 2151904 - 2151927 + F 100 -8.9 -5.63517 | gap 1, opp_overlap 2151904 CTGACTACACCCAAA GCCTGCATGG TTCGC CCA-GCAGGC TTTTTTATTTCCCCA YPTB1804 2151960 - 2152172 + | putative holin protein YPTB1805 2152172 - 2152660 + | endolysin (lysis protein) (lysozyme) YPTB1806 2152792 - 2153310 + | hypothetical protein YPTB1807 2153528 - 2153968 + | hypothetical protein TERM 2296 2154053 - 2154071 + F 100 -13.2 -4.01078 | CCAGGGGGTAATCTG CTCTCCTG ATT CAGGAGAG TTTATGGTCACTTTT TERM 2297 2154124 - 2154109 - g 71 -4.6 -4.56914 | overlap 2154110 TTATGGAAATTAAAA TCCTGC ACAA GCAGGG AATGAGTAGCCGGGC YPTB1808 2154075 - 2155097 + | putative transposase IS100 TERM 2298 2155178 - 2155164 - g 82 -11.4 -3.3506 | overlap 2155155 TGGAAAGCCTTATAA GCGCAG CGC CTGCGC TGTCACAACAGGCAG YPTB1809 2155097 - 2155876 + | transposase/IS protein TERM 2299 2156559 - 2156541 - g 76 -8.8 -4.13304 | opp_overlap 2156551, overlap 2156529 2156542 AAACCATGCGGAAAA TCCACGAG GAT CTCGTGGC GGCGGGATCAGTTGA TERM 2300 2156558 - 2156542 - g 81 -12.3 -3.07259 | opp_overlap 2156551, overlap 2156529 2156541 AACCATGCGGAAAAT CCACGAG GAT CTCGTGG CGGCGGGATCAGTTG YPTB1810 2155994 - 2156851 + | putative small subunit bacteriophage terminase TERM 2301 2157009 - 2157023 + G 76 -11.4 -2.77522 | overlap 2157008 AACCTTCCGTATGCG TCCCGC GCA GCGGGA ATTGTTCAAAAATAT YPTB1811 2156848 - 2158554 + | putative bacteriophage terminase large subunit TERM 2302 2159465 - 2159477 + G 71 -6.9 -4.16842 | GCGAGTCAGCCGGAT CCGCG AAT CGTGG TTTGTTGGCCCTCAC YPTB1812 2158554 - 2160674 + | putative phage portal protein TERM 2303 2160739 - 2160758 + F 100 -8.5 -5.04601 | opp_overlap 2160735 2160739 ATTGCACCGAATTAA GCCTCGC CTAAAC GCGGGGC TTTTTGCTTTCTGGC TERM 2304 2160800 - 2160816 + F 100 -9.4 -5.35224 | opp_overlap 2160798 TCATCTGAATAACTT GCCCAC AACGC GTGGGC TTTTCTTTTTCTACC YPTB1813 2160944 - 2161993 + | putative phage l protein TERM 2305 2162018 - 2162031 + F 100 -9.5 -5.04601 | TGATTTAAATCTCAA CCCGC TACG GCGGG TTTTTCATTTATGGA YPTB1814 2162053 - 2163276 + | hypothetical protein TERM 2306 2163308 - 2163331 + F 78 -5.2 -4.96848 | opp_overlap 2163310, overlap 2163310 TACGCTAATACCTCA AAGGGCAGGC TTCG GTCTGCTCTC TTTTTGTCTGGAGAA TERM 2307 2163310 - 2163329 + F 76 -7.8 -4.11141 | opp_overlap 2163310, overlap 2163308 CGCTAATACCTCAAA GGGCAGGC TTCG GTCTGCTC TCTTTTTGTCTGGAG YPTB1815 2163354 - 2163737 + | hypothetical protein TERM 2308 2163759 - 2163772 + F 86 -5.9 -5.24989 | opp_overlap 2163759 CAATCCCTCTAGAAA CCCGC CTCG GTGGG TTTTTTCCTGTCTGC YPTB1816 2163803 - 2164255 + | hypothetical protein YPTB1817 2164258 - 2164854 + | hypothetical protein YPTB1818 2164854 - 2165507 + | hypothetical protein TERM 2309 2165691 - 2165706 + G 70 -2.5 -4.99043 | opp_overlap 2165669, overlap 2165689 ACTCCATTACAGTGG CTGCG AATGGC CGTAG TTTTGTTTATGGCGC YPTB1819 2165504 - 2167639 + | hypothetical protein YPTB1820 2167650 - 2168114 + | putative phage tail fiber assembly protein TERM 2310 2168120 - 2168103 - T 91 -8.4 -4.62054 | opp_overlap 2168102 TTAACCAAAGCAAAA CTGGGC AATTAA GCCCAG CCTATTTCAGTCATA YPTB1821 2168453 - 2168127 - | putative acyl carrier protein TERM 2311 2168415 - 2168395 - G 79 -11.9 -3.25204 | overlap 2168398 TTACTCTTAAACAGA TAAGCGCCA TCA TGGCGCCTA ACAAGTTCATAAATA TERM 2312 2168412 - 2168398 - G 85 -11.4 -3.76232 | overlap 2168395 CTCTTAAACAGATAA GCGCCA TCA TGGCGC CTAACAAGTTCATAA YPTB1822 2168911 - 2168447 - | hypothetical protein TERM 2313 2169093 - 2169112 + H 100 -10 -5.60993 | opp_overlap 2169085, overlap 2169085 ACCCAAAGATGCCAA GCCTCACT TTTT AGTGGGGC TTTTTTTATGCCCGC YPTB1823 2169143 - 2170771 + | hypothetical protein YPTB1824 2170768 - 2171874 + | hypothetical protein TERM 2314 2172860 - 2172878 + GF 80 -10.2 -3.51934 | opp_overlap 2172859, overlap 2172857 ATGGTACTCAGATAG GCCCGGCT TGG GGTCGGGC TATTTATGAGCCAGC YPTB1825 2171941 - 2172972 + | hypothetical protein TERM 2315 2173024 - 2173057 + G 78 -8.9 -4.07687 | opp_overlap 2173028 2173030, overlap 2173025 2173030 ACTACTCATTCACAT CCAAGACGCCTGC CGTAAAAA GCAGGCGTTTTGC TTTTCGGCGGAAGAT TERM 2316 2173025 - 2173056 + G 81 -12.4 -3.04398 | opp_overlap 2173028 2173030, overlap 2173024 2173030 CTACTCATTCACATC CAAGACGCCTGC CGTAAAAA GCAGGCGTTTTG CTTTTCGGCGGAAGA TERM 2317 2173030 - 2173051 + G 88 -8.7 -4.67038 | opp_overlap 2173030 2173028, overlap 2173025 2173024 CATTCACATCCAAGA CGCCTGC CGTAAAAA GCAGGCG TTTTGCTTTTCGGCG YPTB1826 2172947 - 2173321 + | hypothetical protein YPTB1827 2173329 - 2173934 + | hypothetical protein YPTB1828 2173950 - 2174333 + | hypothetical protein YPTB1829 2174333 - 2174572 + | hypothetical protein TERM 2318 2175876 - 2175864 - g 75 -7.7 -4.17002 | CAGCAAATGAAAGAA CACTC ACC GAGTG CACAACCTGGTACAA YPTB1830 2174583 - 2175974 + | hypothetical protein TERM 2319 2176037 - 2176025 - f 77 -3.5 -5.1356 | TGTCATTAATAAAAA TTATA TTT TATAA GGATAATATTAATGA TERM 2320 2176256 - 2176275 + F 100 -10 -5.64274 | opp_overlap 2176248, overlap 2176248 ACCCAAAGATGCCAA GCCTCACT TTTT AGTGGGGC TTTTTTTATGCCTAA TERM 2321 2176768 - 2176793 + GF 73 -7.5 -4.15222 | opp_overlap 2176775, overlap 2176769 ATAACTACAGTGATG GGGCAAAGCAG GCCG CTGCTATGCCA TTTATTGAACGGAAT TERM 2322 2176769 - 2176792 + GF 79 -11 -3.08812 | opp_overlap 2176775, overlap 2176768 TAACTACAGTGATGG GGCAAAGCAG GCCG CTGCTATGCC ATTTATTGAACGGAA TERM 2323 2178577 - 2178552 - gf 100 -8.9 -4.88684 | opp_overlap 2178553 2178556, overlap 2178553 2178556 AACAGAAATACAAAA CCAGCGCCCTC AACT GAGGGCGTTGT TGTATCTGGCGATAA TERM 2324 2178576 - 2178553 - gf 100 -12.4 -3.5077 | opp_overlap 2178553 2178556, overlap 2178552 2178556 ACAGAAATACAAAAC CAGCGCCCTC AACT GAGGGCGTTG TTGTATCTGGCGATA TERM 2325 2178553 - 2178576 + GF 100 -14.6 -3.59202 | opp_overlap 2178553 2178552 2178556, overlap 2178556 ACAGAAATACAAAAC CAGCGCCCTC AACT GAGGGCGTTG TTGTATCTGGCGATA TERM 2326 2178573 - 2178556 - gf 86 -12.7 -2.56568 | opp_overlap 2178553 2178556, overlap 2178553 2178552 GAAATACAAAACCAG CGCCCTC AACT GAGGGCG TTGTTGTATCTGGCG TERM 2327 2178556 - 2178573 + GF 100 -12.7 -3.92996 | opp_overlap 2178556 2178553 2178552, overlap 2178553 GAAATACAAAACCAG CGCCCTC AACT GAGGGCG TTGTTGTATCTGGCG TERM 2328 2180048 - 2180029 - gf 100 -10 -4.88407 | overlap 2180041 TTAGTGAAGGAAAAA GGAGTGAG ATTA CTCACCCC GTGCGTCAGGAAGTG TERM 2329 2182233 - 2182211 - gf 78 -5.6 -4.89521 | overlap 2182200 AGAGGGCAAAGAAAA CAACTTTACC GCC GATGAAGTTG CATACATGCAAACCC TERM 2330 2182258 - 2182246 - gf 72 -7.7 -3.74077 | TTGCATACATGCAAA CCCTT AAC AAGGG TAATGAGGCATTATT YPTB1831 2176308 - 2182709 + | hypothetical protein TERM 2331 2182814 - 2182798 - gT 82 -5.1 -5.1287 | CGCACAGCTAAAAAA GTGCTGA CCA TTAGCAC TACATCAATGCCTGA TERM 2332 2182899 - 2182887 - gT 70 -7.7 -3.72374 | opp_overlap 2182873 2182897, overlap 2182881 GGCTATCAATAAAGA TGGCT TTA AGCCA GTTACCGCATCGTTT YPTB1832 2182663 - 2184330 + | hypothetical protein TERM 2333 2184331 - 2184356 + T 100 -14.1 -3.17901 | opp_overlap 2184331 2184333, overlap 2184316 2184333 TATTTTAATAAATAA TATAGGTGGGC TAGA GCCCACCTATG TTCACTTGAAAATAT TERM 2334 2184356 - 2184331 - T 100 -11.9 -4.21438 | opp_overlap 2184331 2184316 2184333, overlap 2184333 TATTTTAATAAATAA TATAGGTGGGC TAGA GCCCACCTATG TTCACTTGAAAATAT TERM 2335 2184333 - 2184354 + T 100 -14.5 -3.15056 | opp_overlap 2184333 2184331, overlap 2184331 2184316 TTTTAATAAATAATA TAGGTGGGC TAGA GCCCACCTA TGTTCACTTGAAAAT TERM 2336 2184354 - 2184333 - T 100 -14.5 -3.69841 | opp_overlap 2184331 2184316 2184333, overlap 2184331 TTTTAATAAATAATA TAGGTGGGC TAGA GCCCACCTA TGTTCACTTGAAAAT TERM 2337 2184587 - 2184597 + T 73 -5.4 -4.7373 | ATCGACATACTAATC TCCT TTT AGGA TTTTTACTGCAATGG YPTB1833 2184985 - 2184581 - | hypothetical protein TERM 2338 2185054 - 2185020 - R 74 -6.7 -4.27463 | gap 1, opp_overlap 2185020 2185019 2185017 2185022, overlap 2185017 TAATAATATAAATAA TATGGCATTGTGACTA AAAA TAGTCAAAAT-CCATA CTGTTTTTAATGACA TERM 2339 2185404 - 2185424 + r 85 -4 -5.4756 | opp_overlap 2185397 GTATTTAACTTGCAC CAAGGG TCTTTTAAT CCCTTG TTTTTTCTTCGCCTT TERM 2340 2185647 - 2185660 + r 100 -9.5 -6.02919 | CGAGTATGTCGTTAA CCGCC GAGA GGCGG TTTTTTTGTTTCTGG TERM 2341 2185788 - 2185775 - R 100 -9.5 -5.78622 | CTAGGCGAAAAAAAA CCCGC AAAA GCGGG ATGAGCGTCGGGTAA ogrK 2186037 - 2185864 - | prophage p2 Ogr protein YPTB1835 2187206 - 2186112 - | bacteriophage P2 GPD protein TERM 2342 2186911 - 2186893 - G 73 -7.4 -4.25283 | AGCGTTTCACGAAAA TCCGCACT GCG AGCGCGAA CAGTCAGCTTATCCG YPTB1836 2187667 - 2187203 - | putative bacteriophage P2 tail protein YPTB1837 2190594 - 2187679 - | putative tail fiber component T of bacteriophage P2 TERM 2343 2187974 - 2187944 - G 73 -10.5 -3.13432 | gap 2, opp_overlap 2187951 CTGAATAGCATGGAA GCCGCAAC--CGCCA TAG CGGCGGTGTTGCGGC GGCTGGTGACCTGTG TERM 2344 2188145 - 2188184 + g 72 -5.7 -4.37658 | overlap 2188124 2188120 2188150 2188173 CCGTAGTTACCCGGG CCCGCGGCAGTGGC-TGGG TTTG CCTGCGCCAGTGCC-TGGG TTTTGTCAGAGCGTT TERM 2345 2189514 - 2189531 + g 71 -9.1 -3.56643 | opp_overlap 2189498 2189513 CGCTACCCAGCATAG CTGTGGC CGCC GCCACGG TTTCCAGACTCTGGC TERM 2346 2190029 - 2190039 + g 71 -8.2 -3.64162 | overlap 2190036 GTATACCCTAATCCG GCGG CTA CCGC TTTGCGCTGATTGCT YPTB1838 2190709 - 2190587 - | phage protein YPTB1839 2191068 - 2190721 - | hypothetical protein TERM 2347 2191115 - 2191096 - R 90 -11.4 -3.6512 | opp_overlap 2191095 2191092 TAAATAAGGGGTAAA GGCGCGGA GTTA TCCGCACC GTGATATTACAGGCC YPTB1840 2191637 - 2191122 - | putative P2 tail tube protein YPTB1841 2192824 - 2191649 - | putative bacteriophage P2 tail sheath protein TERM 2348 2192627 - 2192641 + g 83 -11.4 -3.57144 | TGAATGGGCTAATGT GCCGGT TTC ACCGGC TTTGCCGCTGGCGGC TERM 2349 2192951 - 2192923 - R 100 -15.4 -4.24786 | opp_overlap 2192930, overlap 2192924 GGCACAACAGAGAAA CCAACAACCCCG GCTGG CGGGGTTGTTGA GCAGGGCTATACGAC TERM 2350 2192950 - 2192924 - R 100 -16.7 -3.14149 | opp_overlap 2192930, overlap 2192923 GCACAACAGAGAAAC CAACAACCCCG GCTGG CGGGGTTGTTG AGCAGGGCTATACGA TERM 2351 2192930 - 2192944 + r 73 -8.5 -3.61517 | opp_overlap 2192924 2192923 CAGAGAAACCAACAA CCCCG GCTGG CGGGG TTGTTGAGCAGGGCT YPTB1842 2193437 - 2192958 - | hypothetical protein YPTB1843 2194888 - 2193449 - | hypothetical protein YPTB1844 2195493 - 2194885 - | putative bacteriophage P2 protein YPTB1845 2196394 - 2195486 - | putative bacteriophage P2 related protein YPTB1846 2196750 - 2196397 - | putative phage-related protein YPTB1847 2197382 - 2196747 - | phage baseplate assembly protein V TERM 2352 2197174 - 2197153 - G 78 -7.9 -4.46212 | overlap 2197154 GCGGGCAGCACAAAA CCGGTGGTG AGCT CACCGCCGA TACTGATCACCATGA TERM 2353 2197238 - 2197222 - G 83 -7.2 -4.8048 | overlap 2197226 GGCGCAGACCAAAAA CGCACC CGCCC GGCGCG CAGGGTTAACCAATT TERM 2354 2197526 - 2197504 - R 80 -10.6 -3.55761 | opp_overlap 2197502, overlap 2197505 TATGGAGTTTTCAAA TGGTAGCTGT AAA ACAGCTACCT CATAGGTTTTACTTC TERM 2355 2197525 - 2197505 - R 95 -14.1 -2.73243 | opp_overlap 2197502, overlap 2197504 ATGGAGTTTTCAAAT GGTAGCTGT AAA ACAGCTACC TCATAGGTTTTACTT YPTB1848 2198429 - 2197713 - | hypothetical protein TERM 2356 2198557 - 2198569 + r 80 -4.8 -5.1523 | TTGTTCTTGGCTATT CCAG AAGTG CTGG TTTTTGTGTTGTCAA YPTB1849 2199192 - 2198746 - | O protein TERM 2357 2199128 - 2199118 - G 73 -8.2 -3.92373 | overlap 2199119 GACCTGACGCATAAA CGCG CCG CGCG CCTGTGGGGCCAATT YPTB1850 2199656 - 2199189 - | P2 phage tail completion protein R YPTB1851 2200180 - 2199755 - | hypothetical protein YPTB1852 2200580 - 2200185 - | bacteriophage P7 related protein YPTB1853 2200953 - 2200567 - | hypothetical protein YPTB1854 2201186 - 2200983 - | putative WPhiphage-related tail protein YPTB1855 2201677 - 2201186 - | putative orf4 of phage P2 (gene L) TERM 2358 2201374 - 2201360 - G 83 -10 -4.21194 | TTGCATCAGGCAAAA TACCGC GGT GCGGTA CAACTGAATGCGAGT TERM 2359 2201755 - 2201770 + r 73 -8.2 -3.71527 | GGTTAGCCAGCGTGC CGCCCT CGCC GGGGCG TTTGGGTGATTAGGC YPTB1856 2202564 - 2201911 - | putative R protein bacteriophage 186 gb|AAC34151.1| TERM 2360 2202117 - 2202136 + g 73 -7 -4.25104 | opp_overlap 2202117 GCTGGGCGCGCAATA GCTGCGGG GTAT CCAGCGGC TTTTCATCGGCCAAG YPTB1857 2203626 - 2202571 - | putative major capsid protein YPTB1858 2204478 - 2203663 - | V protein phage 186 TERM 2361 2205159 - 2205173 + G 74 -4.2 -4.91109 | TTAAAATCCCGCCAA GTCGGT GCA ACCTAC TTTTTCTCATGGGAA TERM 2362 2205606 - 2205620 + G 71 -9.2 -3.49475 | GTCAGCTACCCACGG CTGGCC GGA GGCCGG TTATGTGAGGATAAG TERM 2363 2206272 - 2206285 + G 73 -4.5 -4.71426 | gap 1, overlap 2206272 2206273 ACCATGACCGCCACT G-GGCG AAA CGCCAC TTTTGTTACTAGCAG YPTB1859 2204649 - 2206412 + | gpP phage P2 terminase YPTB1860 2206460 - 2207452 + | capsid portal protein TERM 2364 2207475 - 2207489 + T 91 -7.8 -4.85433 | TTATGCATATGCTAA CCGTCT TTT AGGCGG TTTTTGCATTTATAT TERM 2365 2207582 - 2207601 + T 76 -10.8 -2.69031 | opp_overlap 2207581 2207580, overlap 2207581 2207580 GATGAAAATTAAATT GCTTGTGA CATG TCACAAGC CTATTGATTTTATTT TERM 2366 2207657 - 2207647 - T 71 -8.2 -3.54181 | overlap 2207641 ATTTTAAAAGAGCAA GCCG CAA CGGC CACCTCGAAAATCAG TERM 2367 2208012 - 2207986 - T 86 -5.9 -5.37593 | gap 2, opp_overlap 2207986 2207989 GGTGAAATGAAAAAA GCACCTCTCTACG TGG CGT-G-GAGGCGC TTTGGTGTGGGGTGG YPTB1861 2208478 - 2208134 - | putative bacteriophage protein gp46 YPTB1862 2211241 - 2208686 - | putative phage replication protein TERM 2368 2208946 - 2208958 + g 100 -10.5 -4.63527 | overlap 2208945 GTGCGGTTTTTTCTC GCCGC TGG GCGGC TTTTTCGGCTGATGC TERM 2369 2210778 - 2210824 + g 95 -13.3 -3.88559 | gap 1, opp_overlap 2210783 2210786, overlap 2210783 CGCACGGCATCCAGA CGTAACAATGCATTCTT-GCCG GTAC CGGTTAAGAATGCATTGGTATG TTTATCACCATGATT TERM 2370 2210819 - 2210783 - G 79 -11.8 -3.1355 | gap 1, opp_overlap 2210778 2210783, overlap 2210786 GGCATCCAGACGTAA CAATGCATTCTT-GCCG GTAC CGGTTAAGAATGCATTG GTATGTTTATCACCA TERM 2371 2210783 - 2210819 + g 88 -14 -2.59797 | gap 1, opp_overlap 2210783 2210786, overlap 2210778 GGCATCCAGACGTAA CAATGCATTCTT-GCCG GTAC CGGTTAAGAATGCATTG GTATGTTTATCACCA TERM 2372 2211131 - 2211114 - G 71 -8.5 -3.72576 | overlap 2211130 GCGGCCGGCACTAAA GATTGGT GACC ACCAATC GCGGGGCGCGGGGCA TERM 2373 2211207 - 2211175 - G 87 -11.2 -4.21607 | overlap 2211177 2211178 2211180 CCCATTTAATAGAAA CATCACCGCTGCCC GGATA AGGCAGCGGTGGAG CTGGGGTGATGCGGC TERM 2374 2211205 - 2211177 - G 88 -12.4 -3.70511 | overlap 2211175 2211178 2211180 CATTTAATAGAAACA TCACCGCTGCCC GGATA AGGCAGCGGTGG AGCTGGGGTGATGCG TERM 2375 2211204 - 2211178 - G 100 -15.9 -2.81584 | overlap 2211177 2211175 2211180 ATTTAATAGAAACAT CACCGCTGCCC GGATA AGGCAGCGGTG GAGCTGGGGTGATGC TERM 2376 2211202 - 2211180 - G 83 -12.7 -2.94681 | overlap 2211178 2211177 2211175 TTAATAGAAACATCA CCGCTGCCC GGATA AGGCAGCGG TGGAGCTGGGGTGAT TERM 2377 2211333 - 2211357 + r 70 -9.4 -2.75844 | overlap 2211332 2211335 AAGCACCCTTGGTCA TATTGCAGCC CTCAA GGTTGCAATA ATTTCACCTACCGCC dam 2212148 - 2211330 - | putative DNA adenine methylase YPTB1864 2212798 - 2212145 - | Orf81 bacteriophage 186 TERM 2378 2212848 - 2212820 - R 74 -8.1 -3.93166 | opp_overlap 2212821, overlap 2212821 CCCCTAAAAAATTAA CTCCCTCTAACGC AAT GCGCCAAAGGGAT ATGTGTTTATTTTTC TERM 2379 2212847 - 2212821 - R 83 -11.6 -2.95177 | opp_overlap 2212821, overlap 2212820 CCCTAAAAAATTAAC TCCCTCTAACGC AAT GCGCCAAAGGGA TATGTGTTTATTTTT YPTB1865 2213622 - 2212855 - | hypothetical protein YPTB1866 2214013 - 2213705 - | hypothetical protein YPTB1867 2214301 - 2214041 - | hypothetical protein YPTB1868 2214757 - 2214443 - | hypothetical protein YPTB1869 2215175 - 2214972 - | putative DNA-binding protein TERM 2380 2215472 - 2215455 - g 85 -2.7 -5.64421 | opp_overlap 2215457, overlap 2215457 ATGCCAAACAAAAAA GAGGAAT TATT ATTCCTA ATTGGCGCACGACTG YPTB1870 2215440 - 2215808 + | putative prophage transcriptional regulator USO1 2215829 - 2217526 + | hypothetical protein YPTB1872 2217547 - 2217966 + | putative bacteriophage integrase TERM 2381 2218266 - 2218246 - g 77 -2.7 -5.26155 | AGATAAATAGAAAAA TAAAATC GGTTGAT GATTTTA AACCTTACGCGAGTG YPTB1873 2218035 - 2218415 + | hypothetical protein TERM 2382 2218455 - 2218445 - g 71 -6.8 -4.25104 | opp_overlap 2218444 CTTCCGTCAGGAAAA TGGC TTT GCCA ATGCTTCCCTTATGG YPTB1874 2218415 - 2218747 + | putative bacteriophage integrase YPTB1875 2219041 - 2219418 + | putative prophage integrase TERM 2383 2219636 - 2219649 + F 100 -9.5 -5.71983 | CGAGTATATCGTTAA CCGCC GAGA GGCGG TTTTTTTGTGATTAA TERM 2384 2219717 - 2219732 + F 100 -6.2 -5.63103 | CATGTTTTGTGGAGG GTGAAT AAAA ATTCAC TTTTTTTGATTACCG YPTB1879 2221109 - 2221255 + | hypothetical protein YPTB1880 2222318 - 2222076 - | hypothetical protein YPTB1881 2222688 - 2222344 - | hypothetical protein tnpA 2223867 - 2222908 - | putative transposase TERM 2385 2222999 - 2223012 + g 70 -9.5 -3.17219 | CAACGTGTCGGGTTC GCGGC TCTC GCCGC TTGATAGACCTTATA YPTB1883 2224358 - 2223939 - | hypothetical protein TERM 2386 2223997 - 2224020 + g 70 -2.2 -4.86731 | overlap 2223998 2223999 TTTCTTAACACCAGG ATCGCTGCCG TCTC CGCCAGCGCC TTTTCTTTACGCAGC TERM 2387 2224144 - 2224154 + g 80 -4.6 -5.0133 | TGCGCTATCTGCGCG GGGT AAA GCCC TTTTTTACGGCAGTA TERM 2388 2225333 - 2225354 + G 90 -13.1 -3.65314 | AATTCTCTTCTCAAC GTGGCGATA TTAT TATCGCCAC TTATTAGAAATTGGA TERM 2389 2225500 - 2225536 + G 76 -2.3 -5.29846 | opp_overlap 2225503, overlap 2225502 2225503 GGTTTCAGTTTCACA AATTGCTATGCTACAAA TGA TATTTAGCGTAGCAGTA TTTTTATTTGAACTT YPTB1884 2225288 - 2226646 + | MFS superfamliy multidrug-efflux transporter TERM 2390 2227189 - 2227173 - g 77 -4.5 -4.86731 | overlap 2227168 GTCGCTGAAAGAAAA TATTTCA GAA CGAAATA AAACATGTGGGGTAG YPTB1885 2226643 - 2228376 + | ThiF family protein TERM 2391 2229015 - 2229033 + G 71 -9 -3.49951 | AAAACATTGAGCTAT TTAAATCC TCT GGATTTAA TTCTGTCGAAATATG YPTB1886 2228366 - 2229091 + | hypothetical protein YPTB1887 2229079 - 2229933 + | hypothetical protein YPTB1888 2229918 - 2230730 + | hypothetical protein lysA 2230727 - 2231893 + | diaminopimelate decarboxylase TERM 2392 2232163 - 2232184 + GT 77 -10.3 -3.16971 | opp_overlap 2232165 TTCGTCATGCTCAGA TACCCTATT TTGA AATAGGGTA TTGGCTGTCTACTCA yjcK 2231868 - 2232425 + | putative ribosomal-protein-alanine acetyltransferase YPTB1891 2232757 - 2232455 - | hypothetical protein TERM 2393 2232548 - 2232528 - G 73 -5.4 -4.49939 | overlap 2232530 ACACAATCGATAAAA TCCAGCGT ATTTG ACGCTGTA CGGCGGTGATAGAGC tnpA 2234054 - 2233095 - | putative transposase TERM 2394 2233186 - 2233199 + g 70 -9.5 -3.17219 | CAACGTTTGGGGTTC GCGGC TCTC GCCGC TTGATAGACCTTATC TERM 2395 2234332 - 2234342 + r 77 -4.6 -5.0133 | TGCGCTATCTGCGCG GGGT AAA GCCC TTTTTTACGGCAGTA TERM 2396 2234922 - 2234887 - R 71 -4.9 -4.70046 | gap 1, overlap 2234882 2234888 2234889 GAGAAAACTATAAAA TGGGTAACCACTTTAC GCGAT ATAGAGTGGTTAC-CA TTAACAGGAAAGTGA TERM 2397 2234921 - 2234889 - R 71 -10 -2.62614 | overlap 2234882 2234887 2234888 GAAAACTATAAAATG GGTAACCACTTTAC GCGAT ATAGAGTGGTTACC ATTAACAGGAAAGTG YPTB1895 2235197 - 2234943 - | hypothetical protein YPTB1896 2235507 - 2235202 - | hypothetical protein TERM 2398 2235374 - 2235354 - G 71 -7.5 -4.05747 | overlap 2235343 2235355 TACACCCCATAGAAA CCCCCATCG GGC CGATGGGAT GCAATCTGAAATTTC TERM 2399 2235373 - 2235355 - G 74 -11 -3.02966 | overlap 2235343 2235354 ACACCCCATAGAAAC CCCCATCG GGC CGATGGGA TGCAATCTGAAATTT YPTB1897 2235719 - 2235504 - | hypothetical protein TERM 2400 2235680 - 2235665 - G 73 -3.3 -4.89233 | TACCAACACCAAAAA TACTC AAAGGG GAGTA GTGAGCATTGTTAAC YPTB1898 2236441 - 2236154 - | hypothetical protein YPTB1899 2236757 - 2236458 - | hypothetical protein YPTB1900 2237113 - 2236754 - | hypothetical protein TERM 2401 2236864 - 2236848 - G 83 -7.2 -4.8048 | overlap 2236852 GGCGCAGACCAAAAA CGCACC CGCCC GGCGCG CAGGGTTAACCAATT YPTB1901 2237144 - 2237416 + | hypothetical protein TERM 2402 2237543 - 2237533 - g 70 -2.4 -4.90296 | overlap 2237535 AAAAGGTGATAAAAA CCCG TGG CCGG CCAAAACTGGCAAAC YPTB1902 2237424 - 2237687 + | hypothetical protein TERM 2403 2237807 - 2237777 - f 76 -11.2 -2.72511 | overlap 2237776 TGCATCCCCCCAAAG GTTCCCGGATACTT ACA AAGAATTCGGGAAC AATATAAGGAAAGTG TERM 2404 2238286 - 2238272 - f 74 -10 -3.1211 | CATGAGACTATCGAA CCACTC AAA GAGTGG AGAAATGAGATCGTT TERM 2405 2240049 - 2240070 + G 79 -10.1 -3.74693 | TTTATTATCGAGTTT GGTGACCGC CTGA GCGATCACC TTTAATACAGTGGCG YPTB1905 2239737 - 2240075 + | putative transposase (IS285) TERM 2406 2240401 - 2240372 - T 86 -11.7 -3.31428 | gap 1, overlap 2240370 2240368 2240393 TTTAAATACAATAGA TAGCTCTGATTGAG TTA CT-AATCAGAGCTA CTGAGTACCTGTTTG YPTB1906 2241062 - 2240493 - | hypothetical protein YPTB1907 2241508 - 2241074 - | hypothetical protein YPTB1910 2242477 - 2243274 + | GntR family putative transcriptional regulatory protein YPTB1911 2243534 - 2243244 - | hypothetical protein TERM 2407 2243698 - 2243712 + H 72 -7.8 -3.87149 | opp_overlap 2243687, overlap 2243692 2243704 TAAAGCGAACCTTAC GCACCG TGA TGGTGC TTTGAGTTTGCTCAA TERM 2408 2243704 - 2243738 + H 100 -15.3 -3.88232 | gap 1, overlap 2243692 2243698 GAACCTTACGCACCG TGATGGTGCT-TTGAG TTTG CTCAAGAGCACCATCA TTGTTCTGTAAACGA YPTB1912 2243942 - 2244955 + | putative oxidoreductase YPTB1913 2244985 - 2246253 + | ABC transporter, perplasmic sorbitol binding protein TERM 2409 2246253 - 2246293 + F 72 -9.9 -2.77192 | gap 1, overlap 2246254 AGCGTTGTCCCGTTA ATCGCTTTCCGTCAGTGC AGTTGC GCACTGACGGAAA-TGAA ATTCTTACGCAGGTT TERM 2410 2246254 - 2246294 + F 70 -7.7 -3.6279 | gap 1, overlap 2246253 GCGTTGTCCCGTTAA TCGC-TTTCCGTCAGTGC AGTTGC GCACTGACGGAAATGAAA TTCTTACGCAGGTTT YPTB1914 2246320 - 2247180 + | ABC sugar (sorbitol/trehalose/maltose) transporter, permease subunit TERM 2411 2247792 - 2247809 + G 73 -8.5 -3.80174 | TGACACTGTTCTTTA TCTGGAA CGAA TTCCAGA TTGTTCTAACGCTCT YPTB1915 2247173 - 2248000 + | ABC sugar (sorbitol/trehalose/maltose) transporter, permease subunit YPTB1916 2248025 - 2249167 + | ABC sugar transporter, ATP binding subunit YPTB1917 2250590 - 2249850 - | pili assembly chaperone TERM 2412 2250097 - 2250111 + g 75 -5.8 -4.65895 | opp_overlap 2250096 2250099 TTCGCGATTATAACG TATTGA TTA TCAATA TTTTTAAGTGAAAAC YPTB1918 2251936 - 2250587 - | hypothetical protein YPTB1919 2254543 - 2251952 - | putative outer membrane fimbrial usher porin TERM 2413 2252206 - 2252217 + g 72 -5.8 -4.33105 | CCATAGGCAATTGGC TGCC ATCG GGCA TTTTAATGGTGATTA TERM 2414 2253820 - 2253794 - G 71 -2.9 -4.87273 | AAGACTGGAGAAAAA CTGGCCGGAAC TGAAG GTTTCACCCAG CGTAATTTCACTGCC YPTB1920 2255323 - 2254592 - | pili assembly chaperone TERM 2415 2254911 - 2254901 - G 73 -5.4 -4.58395 | opp_overlap 2254909 TGCAGGGCGGAAAAA GACT TTT AGTC GGTTATTGACGATCA YPTB1921 2255946 - 2255416 - | fimbrial protein TERM 2416 2256297 - 2256281 - R 100 -5.8 -6.23209 | opp_overlap 2256281 TGAATCAAAAAAAAA CGCCAA GAAGA CTGGCG CTTTTAATAGGGGAA YPTB1922 2260355 - 2256327 - | two-component sensor TERM 2417 2259295 - 2259280 - GR 73 -3.2 -4.99638 | AGATCGACAGAAAAA CCGG CCATTTCT CCGG TCCGGCGGTCACGGA TERM 2418 2260237 - 2260211 - GR 100 -14.5 -3.31931 | overlap 2260204 TTAGAGAAGCATGAA GCTGCCCGCTA ATCAG TAGCAGGCAGC AGAGTACGGTACGCA YPTB1923 2260962 - 2260330 - | putative two-component response regulator YPTB1924 2263111 - 2261789 - | putative 4-hydroxybutyrate coenzyme A transferase YPTB1925 2263676 - 2263134 - | putative transcription regulatory protein TERM 2419 2263763 - 2263739 - R 100 -13.6 -3.01416 | gap 1, overlap 2263729 TATCAGGCAGAGATA CCCGCTCGGGT AAGT ACCCG-GCGGG CCTGACGTGCAACAG YPTB1926 2264568 - 2263726 - | putative citrate lyase beta chain TERM 2420 2264603 - 2264637 + H 78 -9.4 -3.61541 | overlap 2264601 CGCTTAGTCTATGGT CGCCGTTATCATTTAT CCA ATATATGATACCGGTG TGTTTAATTGCTTTT TERM 2421 2265484 - 2265506 + G 100 -16.3 -3.03635 | GCTCGCGTTGGCGTA CCGGCGAGG GGATA CCTCGCCGG TATTAAGAAACTTTG YPTB1927 2264657 - 2265541 + | LysR family transcriptional regulator TERM 2422 2265612 - 2265600 - T 71 -3.3 -5.03145 | overlap 2265601 CAATCGGTTAAAAAA CGCCC CAA GAGCA AAATTATTGGCTATC YPTB1928 2266089 - 2265616 - | putative lipoprotein TERM 2423 2265865 - 2265843 - G 73 -2 -5.10208 | overlap 2265845 CAATGGGAATAAAAA CATTCCAC TCGCCTT GCGGAATA AACGAGAAATGTCCC YPTB1929 2266674 - 2266114 - | hypothetical protein YPTB1930 2268123 - 2266894 - | putative MFS aromatic acid symporter TERM 2424 2267621 - 2267580 - G 72 -5.7 -4.33274 | opp_overlap 2267607, overlap 2267608 TGTAGAGTACTAAAA GGGCGGGAAGCACACCAAT CCAG AATAATGCGCGCCACGCCC ACTCCTCTGATAGTA TERM 2425 2268151 - 2268177 + r 73 -2.5 -5.16681 | gap 2, overlap 2268156 TACAGACTGGCTTTT TAACTCTTGTGAG CAC CTCACA--AGTTA TTTTGTTATTTTTAA TERM 2426 2268156 - 2268174 + r 100 -11.8 -4.59946 | overlap 2268151 ACTGGCTTTTTAACT CTTGTGAG CAC CTCACAAG TTATTTTGTTATTTT YPTB1931 2269058 - 2268189 - | putative dicarboxylic acid hydrolase TERM 2427 2269693 - 2269711 + G 72 -11 -2.52464 | opp_overlap 2269693 2269691 CGACGTTAGCAAATA CTGTCGGT ACC GCCGACAG TGCGTTACGGCAGGC TERM 2428 2269711 - 2269693 - g 77 -10.3 -3.4582 | opp_overlap 2269693, overlap 2269691 CGACGTTAGCAAATA CTGTCGG TACCG CCGACAG TGCGTTACGGCAGGC YPTB1932 2269170 - 2270132 + | LysR family transcriptional regulator YPTB1933 2271036 - 2270437 - | Na(+)-translocating NADH-quinone reductase subunit E TERM 2429 2270665 - 2270655 - G 78 -5.4 -4.98255 | GCTGAACCATAAAAA TGGT TGC ACCA AATATTGCACAGTGG YPTB1934 2271388 - 2272548 + | putative aminotransferase ansP 2274273 - 2272744 - | APC family L-asparagine permease TERM 2430 2273648 - 2273636 - G 71 -4.7 -4.49556 | CCGTGAGGAAAGAAA CCGCC GTT GTCGG TAATCAAATGAATAC TERM 2431 2274064 - 2274052 - G 71 -2.7 -4.93365 | CCGGAGAATGAAAAA TGAAA AAA TTCCA CAAACCAGATAAACC TERM 2432 2274723 - 2274757 + r 73 -3.7 -4.96845 | TTATATTGCATTTTA TCTTATTTCATATGT ATCTA ACCCATGGAATAAGA TTTATTTATTTTTAT YPTB1936 2275808 - 2275038 - | DeoR family transcriptional regulator TERM 2433 2275458 - 2275425 - G 73 -4.7 -4.7373 | GGATTCGATCAAAAA GTTAGCAATAACAAA GTCG TTGGTTACCACTAAC AGATCATCTCTGTCC YPTB1937 2277019 - 2278026 + | glutaminase TERM 2434 2278970 - 2278957 - g 75 -8.1 -4.30416 | AGGAGCAAGGTAAAA CGCCA TTAC TGGCG CTAGACGTGATTACA TERM 2435 2279650 - 2279637 - g 70 -8.1 -3.81146 | CGGGTGAATGAAGAA GCACG GTTA CGTGC GCTGAAATTCGGTTT YPTB1938 2278137 - 2279777 + | MFS superfamily multidrug efflux transporter TERM 2436 2279786 - 2279766 - f 84 -5.4 -5.25803 | overlap 2279754 2279767 AATCTGGATAAAAAA GCCAGCAA GTAAG TTGCTGGA GGTTATTGACAAAGT TERM 2437 2279785 - 2279767 - f 78 -8.9 -3.74397 | overlap 2279754 2279766 ATCTGGATAAAAAAG CCAGCAA GTAAG TTGCTGG AGGTTATTGACAAAG TERM 2438 2279861 - 2279887 + F 72 -10.1 -2.88849 | gap 1, opp_overlap 2279850, overlap 2279856 2279862 ACATCCATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCTCTGCC TERM 2439 2279862 - 2279888 + F 84 -10.1 -3.82218 | gap 1, opp_overlap 2279850, overlap 2279856 2279861 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCTCTGCCT TERM 2440 2279967 - 2279977 + F 70 -2.6 -5.07567 | GCAAGTAAGTTGCTG TTAA AAT TTAA TTTTTTGAAATATAA TERM 2441 2280044 - 2280012 - f 91 -12.8 -2.88887 | gap 1, opp_overlap 2280012, overlap 2280008 2280031 TTGAAATAAAAGTGA CTGGCAGTGTGTTGC GAAA GCAGC-CACTGCCAG TTTTTTCTTTCTGGC TERM 2442 2280012 - 2280044 + F 100 -15 -5.72622 | gap 1, opp_overlap 2280012 2280008 2280031 TTGAAATAAAAGTGA CTGGCAGTGTGTTGC GAAA GCAGC-CACTGCCAG TTTTTTCTTTCTGGC TERM 2443 2280244 - 2280259 + F 71 -3.2 -5.00884 | opp_overlap 2280244 ATTGGTGGGGTAAAT TGCGCA TCAG TACGCA TTTTTTGAAAAAAAT TERM 2444 2280633 - 2280618 - g 77 -4.6 -5.00616 | TCTCCGCGCAAAAAA GCTTCC AGAT GGAGGC GGCCTTTGGCGAGAT TERM 2445 2281282 - 2281263 - g 75 -7.8 -4.26461 | AGCAAGGGAAAATAA CACCGGCA ATGA TGGCGGTG CAGGATGCCTACTTT YPTB1939 2280377 - 2282296 + | high-affinity Fe2+/Pb2+ permease YPTB1940 2282500 - 2283027 + | hypothetical protein TERM 2446 2283699 - 2283714 + G 74 -9 -3.69333 | ATTGCTCAATCTGGC TGCCAC CGTG GTGGCA TTTGGCTGGGTTATA YPTB1941 2283328 - 2284737 + | hypothetical protein YPTB1942 2284740 - 2286032 + | putative ABC transporter, permease subunit TERM 2447 2286152 - 2286178 + G 90 -13 -3.62224 | opp_overlap 2286136 GTGTCAGTGTCGTCT TTGCCGCGCTGA CCG TTGGCGCGGCGA TTGTTACCGCAATGT TERM 2448 2286787 - 2286805 + G 71 -8.8 -3.62046 | opp_overlap 2286787 2286784, overlap 2286788 CCAATTCGCAAAGTA TCTGCCTC TGA GGGGCAGG TTCTTGACAAGATAA TERM 2449 2286788 - 2286804 + G 71 -10.1 -2.77013 | opp_overlap 2286787 2286784, overlap 2286787 CAATTCGCAAAGTAT CTGCCTC TGA GGGGCAG GTTCTTGACAAGATA TERM 2450 2286944 - 2286934 - g 77 -6.8 -4.56597 | overlap 2286935 TTTGCGTTGCAAAAA GCAC TGG GTGC CAGTGGGCGTGACAT TERM 2451 2286949 - 2286935 - g 73 -10 -3.33744 | overlap 2286934 TTGCGTTGCAAAAAG CACTGG GTG CCAGTG GGCGTGACATTATCC TERM 2452 2287127 - 2287144 + G 71 -9.1 -3.61398 | TGCTTTCGTTGTTTG TTGCCGC TGTG GCGGCGA TTGTTCCCACCCGAC YPTB1943 2286022 - 2287203 + | putative ABC transporter, permease subunit YPTB1944 2287207 - 2287920 + | ABC transporter, ATP-binding subunit YPTB1945 2287877 - 2288407 + | putative thioredoxin YPTB1946 2288404 - 2288718 + | putative cytochrome TERM 2453 2289546 - 2289519 - g 77 -8.6 -4.1523 | TGCAACCAGAAAGAA TCCCACATATTA TCAG TAATATGCAGGA GTGTACTTTACCCGG tehB 2288891 - 2289778 + | tellurite resistance protein TehB TERM 2454 2290273 - 2290249 - g 77 -2.8 -5.32882 | gap 1, overlap 2290250 2290251 CATCATTATAAAAAA CGTGATCGGCC TATT GGCCCACCA-G TGGAAGCGGTCTTTA TERM 2455 2290317 - 2290302 - g 71 -4 -4.66609 | gap 1 TAGTTTAGTCAAAAA CGCA-CT TGA AGATGCG GGAGTGCTGGATAAG YPTB1948 2289919 - 2291136 + | putative peptidase TERM 2456 2293841 - 2293855 + G 86 -7.8 -4.84359 | opp_overlap 2293823 2293840 TGATGCTGAACTTAG CGTGAC GCC GTCGCG TTTTTCTGACGGTAA hmsH 2291805 - 2294273 + | outer membrane protein PgaA TERM 2457 2294940 - 2294928 - g 75 -3.4 -5.09259 | GATCCCAAAACAAAA CAGT ATGAA ACTG TTGAAGCCTTTAAGC hmsF 2294286 - 2296307 + | haemin storage system, HmsF protein hmsR 2296297 - 2297631 + | N-glycosyltransferase PgaC TERM 2458 2297778 - 2297803 + G 77 -10.5 -3.54459 | CATATGGGGCCGATA CCGTTGAGGAT TTAT ATTCTCAGCGG TTTGACGACGATTGC hmsS 2297628 - 2298095 + | haemin storage system, HmsS protein YPTB1953 2298444 - 2299343 + | putative acetyltransferase TERM 2459 2299827 - 2299817 - g 77 -4 -5.07652 | GCTGTTAAAACAAAA TCAA AGA TTGA CTCAAGCGACTCGTT YPTB1954 2299782 - 2300060 + | hypothetical protein phoH 2300120 - 2300908 + | hypothetical protein TERM 2460 2300991 - 2300967 - T 100 -14.3 -5.48787 | opp_overlap 2300967 AGAATACACAAAAAA GGGCAAGCGTT AAC AGCGCTTGCCC TTTGCTATTCAGACG TERM 2461 2300967 - 2300991 + T 100 -16.5 -3.92324 | opp_overlap 2300967 AGAATACACAAAAAA GGGCAAGCGTT AAC AGCGCTTGCCC TTTGCTATTCAGACG chaA 2302111 - 2301011 - | calcium/sodium:proton antiporter TERM 2462 2302162 - 2302148 - R 75 -8.5 -3.74693 | CTTTACTGTATTAAA CGGGC ATTAG GCCCG GTTAACGATAAATAA narX 2304459 - 2302678 - | nitrate/nitrite sensor protein NarX TERM 2463 2303737 - 2303753 + g 70 -2.2 -4.87803 | opp_overlap 2303728 CAAAACCTGATTTTT CTGTTG TAAAT CAGCGG TTTTATTTACGACTC TERM 2464 2305976 - 2305938 - g 73 -5.3 -4.57837 | opp_overlap 2305947 2305949, overlap 2305946 2305947 2305949 ACACTTCCCCAAAAA CATCAAAATCAGCCACC CCGCT GGCGGCTATTTCTTATG GTTAGAATTGGAGCC YPTB1958 2304769 - 2306190 + | GntR family regulatory protein argD 2306851 - 2308095 + | bifunctional succinylornithine transaminase/acetylornithine transaminase TERM 2465 2308096 - 2308084 - f 74 -6.3 -4.57073 | opp_overlap 2308083 2308084, overlap 2308086 CAGGTTTGTCAAAAA GTTAC GTC GTAAC GTTTATGCCGTAGGC TERM 2466 2308441 - 2308454 + G 71 -4.5 -4.58663 | opp_overlap 2308441 TCAATGTGTATAAAT CGGTG CCGA CACTG TTTTTGAGCAATGAT astA 2308125 - 2309177 + | arginine succinyltransferase TERM 2467 2309348 - 2309361 + G 81 -9.5 -4.09685 | ACTCTGGCCTGCCAT GCCGC AAGA GCGGC TTTTCCGGCATGGGC TERM 2468 2309587 - 2309577 - g 71 -8.2 -3.70902 | CCGGCCATAGCCAAA CCCC AAT GGGG GACAGCATGTCAGTG astD 2309174 - 2310691 + | succinylglutamic semialdehyde dehydrogenase TERM 2469 2310825 - 2310849 + G 90 -12.9 -3.63515 | opp_overlap 2310813 AAATCGTACTTCCAA CCCTCGTTTGG CAG CCAAACAAGGG TTATTGAAGATGAAA TERM 2470 2310903 - 2310892 - g 71 -7.2 -4.07877 | TTAGGCTACAAACAA GGGG TTCT CCCC CCTCAGGAGCGGCCG astB 2310715 - 2312058 + | succinylarginine dihydrolase astE 2312116 - 2313111 + | succinylglutamate desuccinylase ompC2 2313838 - 2314920 + | outer membrane protein C2, porin TERM 2471 2314895 - 2314913 + T 71 -4.6 -4.58395 | CGGATGATGTTGTTG CGGTAA ACTTGAC TTACCG TTTTTAAGCAGTAGA TERM 2472 2315020 - 2315001 - T 86 -10.6 -3.82789 | opp_overlap 2315002, overlap 2315002 AATAGAAAGATAGAA CGGCGGGG GAAA CCCCGCCT TTGAGGTTATTGGCA TERM 2473 2315019 - 2315002 - T 95 -14.1 -2.88047 | opp_overlap 2315002, overlap 2315001 ATAGAAAGATAGAAC GGCGGGG GAAA CCCCGCC TTTGAGGTTATTGGC TERM 2474 2315002 - 2315019 + T 100 -14.1 -3.72051 | opp_overlap 2315002 2315001 ATAGAAAGATAGAAC GGCGGGG GAAA CCCCGCC TTTGAGGTTATTGGC TERM 2475 2315364 - 2315380 + T 71 -4.3 -4.80882 | overlap 2315367 GTCAGCAGCCTGAAA GGTGGGG GAA TCCCGTC TTTTTACTGTGAGCT hutG 2316321 - 2315515 - | putative N-formylglutamate amidohydrolase hutI 2317538 - 2316318 - | imidazolonepropionase TERM 2476 2317693 - 2317671 - R 70 -7.1 -3.9009 | AACCTAGCCTATAAA TTCACTATC AGCAA GATAGCGAA TTCACAATTGCGTAA hutC 2318509 - 2317742 - | GntR family transcriptional regulator YPTB1968 2318657 - 2320027 + | N-formimino-L-glutamate deiminase YPTB1969 2320027 - 2320599 + | hypothetical protein YPTB1970 2322774 - 2320777 - | hypothetical protein TERM 2477 2320876 - 2320904 + g 78 -5.3 -4.89477 | GTCTGCTTGATGGGT GATTTCGGTTCCG GCT CGTAATCCAAATC TTTTATTCTTACGGG YPTB1971 2323411 - 2324418 + | putative 3-oxoacyl-(acyl-carrier-protein) synthase III YPTB1972 2324432 - 2325448 + | putative dehydrogenase YPTB1973 2325441 - 2326247 + | hypothetical protein YPTB1974 2326244 - 2327530 + | putative coenzyme synthetase TERM 2478 2327704 - 2327723 + F 78 -9.2 -3.727 | CATCGGGGTTTATTG GCGGGGCA TTTA TGCGCCGC TTTGCCTGTCATGAC YPTB1975 2327715 - 2328626 + | putative dehydrogenase YPTB1976 2328626 - 2329780 + | putative glycosyl transferase TERM 2479 2330309 - 2330321 + G 73 -5.5 -4.63486 | ACCCAGCATTACTGA CGCTT TGT GAGCG TTTTATTGCGGCAGT YPTB1977 2329777 - 2330361 + | hypothetical protein YPTB1978 2330358 - 2331545 + | putative glycosyl transferase YPTB1979 2332170 - 2331706 - | hypothetical protein TERM 2480 2332303 - 2332281 - R 77 -6.3 -4.65933 | CATCTTTAAAAGAAA GCAGACAAC ATTTA ATTGCCTGC TCCTCAATATTGCCA YPTB1980 2334058 - 2332340 - | hypothetical protein YPTB1981 2336284 - 2334122 - | hypothetical protein TERM 2481 2336001 - 2336019 + g 73 -2.5 -5.04385 | gap 1 CGTTCACTTAAGATC TCAACGAG CAAA CTC-TTGA TTTTTTCCGCGTATA YPTB1982 2336862 - 2338973 + | hypothetical protein YPTB1983 2339220 - 2339858 + | hypothetical protein YPTB1984 2340652 - 2339993 - | hypothetical protein TERM 2482 2340397 - 2340413 + g 72 -10.9 -2.52023 | opp_overlap 2340385, overlap 2340386 2340396 2340394 2340400 CAATGCGATTGCTGG CAACAGC AAG GCTGTTG GTATTGATATCCATC YPTB1985 2341437 - 2340757 - | putative dehydrogenase TERM 2483 2341501 - 2341472 - R 87 -8.5 -4.57353 | gap 1, opp_overlap 2341472 GGCTATTAGATAAAA GCCGGGTGTGA-GA AGA CCGCCACTCCCGGC TTGAGTCACTAAGTT TERM 2484 2341784 - 2341766 - R 70 -9.6 -2.78695 | opp_overlap 2341765 2341764, overlap 2341765 TTGAGATAAAGTAAT CCGCTAAC TAT ATTAGCGG GGTTTTGGACTCATG YPTB1986 2342728 - 2341778 - | hypothetical protein YPTB1987 2343647 - 2342715 - | hypothetical protein TERM 2485 2342884 - 2342900 + g 83 -2.2 -5.59357 | overlap 2342876 GCTTTATGATTGTGT GCGATC TTTTC GATAGC TTTTTTTGATCTCAT YPTB1988 2344558 - 2343653 - | hypothetical protein TERM 2486 2345217 - 2345248 + r 84 -10.9 -3.63515 | opp_overlap 2345216 2345215 GGCAACGAAGTAAGT CCCCAGGCGCTTA CATAAA TAAGTACCTGGGG TTGTTGAGCGTAGCC TERM 2487 2345303 - 2345330 + r 85 -4 -5.5112 | opp_overlap 2345300 2345303, overlap 2345304 ACGAGTATATAAGCA GTAGTGGAGCCG TCAA CGACCCCACTAA TTTTTTATTACTGAA TERM 2488 2345304 - 2345329 + r 70 -7.5 -3.89587 | opp_overlap 2345303 2345300, overlap 2345303 CGAGTATATAAGCAG TAGTGGAGCCG TCAA CGACCCCACTA ATTTTTTATTACTGA YPTB1989 2346411 - 2345338 - | hypothetical protein TERM 2489 2345806 - 2345796 - G 73 -3.2 -4.87133 | AGTGTGTAAACAAAA TAGC CGG GCCA GATTTATCCACTACG YPTB1990 2347094 - 2346624 - | hypothetical protein YPTB1991 2347571 - 2347149 - | putative decarboxylase TERM 2490 2347750 - 2347726 - R 82 -8.6 -4.30104 | opp_overlap 2347731, overlap 2347723 2347729 TAAAGCAAGAAAGAA GAAGAGGAGG GAGAT CCTCCTCTTA AACCTGTATGCAAAA TERM 2491 2347747 - 2347729 - R 91 -10.3 -4.22676 | opp_overlap 2347731, overlap 2347723 2347726 AGCAAGAAAGAAGAA GAGGAGG GAGAT CCTCCTC TTAAACCTGTATGCA YPTB1992 2349239 - 2347848 - | putative two-component system sensor protein TERM 2492 2348550 - 2348573 + g 71 -4.4 -4.67904 | overlap 2348552 TTCCTGCCGTTCGAG CACGCCGTTG AATG CGACGGCCAG TTTTTGCAGTTCATC copR 2349937 - 2349245 - | transcriptional activator TERM 2493 2349338 - 2349349 + g 76 -7.2 -4.3739 | GGGCGTATCTATTTT CGCC CGCA GGCG TTTTATCGCCACCTC TERM 2494 2350019 - 2350048 + H 93 -8.7 -4.46112 | overlap 2350021 2350022 2350030 2350042 CCAACACCAGGCTGA CATTTTCCTGACA TTTT TGTCAGGAAAGTA TTTCTTTAACTGACA TERM 2495 2350021 - 2350046 + H 95 -11.3 -3.83744 | overlap 2350019 2350022 2350030 2350042 AACACCAGGCTGACA TTTTCCTGACA TTTT TGTCAGGAAAG TATTTCTTTAACTGA TERM 2496 2350022 - 2350045 + H 89 -12.6 -2.89523 | overlap 2350021 2350019 2350030 2350042 ACACCAGGCTGACAT TTTCCTGACA TTTT TGTCAGGAAA GTATTTCTTTAACTG YPTB1994 2350202 - 2351293 + | hypothetical protein YPTB1995 2351484 - 2352149 + | flavodoxin TERM 2497 2352587 - 2352601 + G 83 -7.1 -4.73682 | opp_overlap 2352586, overlap 2352566 TTTTTCTGTAAAATC TGGCG TATTT CGCCA TTTTCTCTTCTGGCG TERM 2498 2352658 - 2352668 + G 73 -3.2 -4.83615 | CAGTATTGCGGTATA CGGA GTG TCTG TTTTTATGGGGCGTG YPTB1996 2352164 - 2352859 + | hypothetical protein YPTB1997 2353908 - 2353066 - | hypothetical protein TERM 2499 2353952 - 2353935 - R 100 -11.3 -5.52079 | opp_overlap 2353935 ATATGAAAACAAAAA TCCACGC AATT GCGTGGA TTTTATAGCATTTTT TERM 2500 2353935 - 2353952 + r 100 -11.3 -4.47485 | opp_overlap 2353935 ATATGAAAACAAAAA TCCACGC AATT GCGTGGA TTTTATAGCATTTTT ychF 2355106 - 2354015 - | translation-associated GTPase pth 2355861 - 2355271 - | peptidyl-tRNA hydrolase TERM 2501 2355427 - 2355411 - G 73 -7.3 -4.18018 | opp_overlap 2355411 GGGGTTTACCCAAAA CAAAGCC AGT GACTTTG CTTTTATCACCAGGA TERM 2502 2355996 - 2356026 + H 73 -8.5 -3.68836 | AAAAATAATTGTATA GTTGAATGATTTT CCTTC GGAATCATTCAAC TTCTTGGCTAAATAT YPTB2000 2356223 - 2356495 + | hypothetical protein TERM 2503 2356562 - 2356527 - T 80 -9 -3.92577 | opp_overlap 2356532, overlap 2356532 GAATCTTCAAAAACA GAAAACCCGTTGTCGC ACAG GCTTCAACGGGTTTTT CTTTATCTGCTTCAA TERM 2504 2356557 - 2356532 - T 100 -8.9 -4.98672 | opp_overlap 2356532, overlap 2356527 TTCAAAAACAGAAAA CCCGTTGTCGC ACAG GCTTCAACGGG TTTTTCTTTATCTGC TERM 2505 2356532 - 2356557 + T 100 -8.9 -5.42975 | opp_overlap 2356532 2356527 TTCAAAAACAGAAAA CCCGTTGTCGC ACAG GCTTCAACGGG TTTTTCTTTATCTGC prsA 2357644 - 2356697 - | ribose-phosphate pyrophosphokinase ipk 2358884 - 2357985 - | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase lolB 2359509 - 2358886 - | outer membrane lipoprotein LolB hemA 2359815 - 2361077 + | glutamyl-tRNA reductase prfA 2361110 - 2362192 + | peptide chain release factor 1 YPTB2006 2362192 - 2363022 + | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase YPTB2007 2363086 - 2363487 + | hypothetical protein YPTB2008 2363484 - 2364293 + | putative transcriptional regulator kdsA 2364389 - 2365243 + | 2-dehydro-3-deoxyphosphooctonate aldolase TERM 2506 2365383 - 2365360 - f 100 -11 -5.46657 | overlap 2365374 2365378 TAGGGCAATAAAAAA GGCAGCGTAG GCAA CTAAGCTGCC TCAGACTGCTGACAA TERM 2507 2365490 - 2365464 - f 84 -10.1 -3.82218 | gap 1, opp_overlap 2365473, overlap 2365465 2365480 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 2508 2365491 - 2365465 - f 72 -10.1 -2.88849 | gap 1, opp_overlap 2365473, overlap 2365464 2365480 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT TERM 2509 2365569 - 2365592 + F 75 -5.2 -4.82901 | opp_overlap 2365564, overlap 2365570 TTGTCAATAACCTCA CGCAGCGTAG GTAA CTAAGCTGCC TTTTTGTGCCCAGAA TERM 2510 2365570 - 2365591 + F 73 -8.7 -3.49419 | opp_overlap 2365564, overlap 2365569 TGTCAATAACCTCAC GCAGCGTAG GTAA CTAAGCTGC CTTTTTGTGCCCAGA TERM 2511 2365610 - 2365628 + F 100 -16 -3.07307 | opp_overlap 2365610 TTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC TERM 2512 2365628 - 2365610 - f 100 -16 -4.36914 | opp_overlap 2365610 TTTGTGCCCAGAAAA CCCCCAGC TAG GCTGGGGG TTCAGTAAAGCTTTC tnp 2365741 - 2366199 + | transposase for the IS1541 insertion element TERM 2513 2366277 - 2366301 + T 100 -9.9 -4.51743 | opp_overlap 2366280, overlap 2366279 2366280 ATAGGCGCATATGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTTGATAATCA TERM 2514 2366279 - 2366299 + T 100 -12.5 -3.86206 | opp_overlap 2366280, overlap 2366277 2366280 AGGCGCATATGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTTGATAAT TERM 2515 2366298 - 2366280 - T 100 -16 -4.8048 | opp_overlap 2366280 2366279 2366277 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTGATAA TERM 2516 2366280 - 2366298 + T 100 -16 -2.90639 | opp_overlap 2366280, overlap 2366279 2366277 GGCGCATATGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTGATAA ychM 2368020 - 2366323 - | putative sulfate transporter YchM TERM 2517 2368834 - 2368813 - R 100 -6.5 -5.95166 | TGTAACCAAAAAAAA GGCCCCGAC TTTC GTCAGAACC TTATTTTTGAATTTG TERM 2518 2368936 - 2368973 + r 88 -12.7 -2.62184 | CACTCAGACACCTCA CCGTTTCGTTGCGCCGT TATA GTGGTGCAACGGGGCGG TACTATAGGGGGCGA TERM 2519 2369097 - 2369083 - R 74 -10 -3.18452 | ATTAGGTGAATTTAA CGCCAA TTT TTGGCG GTGGCGGGGGAGTCA YPTB2012 2369954 - 2369079 - | hypothetical protein TERM 2520 2369259 - 2369273 + g 71 -5 -4.58685 | overlap 2369256 TGCGCGCGAAGCCCC TTTGCC GAG GGTAAA TTTTTCAACGACTTT TERM 2521 2370167 - 2370139 - R 75 -10.3 -2.87564 | overlap 2370159 CCATTCGCTGATACA GTCGCCGTTTCGT CGA ACAATACAGCGAC TGTACCCGCCAGGGA YPTB2013 2371337 - 2370255 - | ABC transporter periplasmic substrate-binding protein YPTB2014 2372193 - 2371357 - | putative ABC transporter, permease subunit TERM 2522 2371840 - 2371816 - G 74 -9.3 -3.61715 | CATGGCGCTGAAGAA GATGCCGATAA TCA TTCCCGGCATC ACTAGCGGGATCAGG YPTB2015 2373056 - 2372190 - | putative ABC transporter, permease subunit TERM 2523 2372393 - 2372382 - G 85 -7.2 -4.87665 | GGCGACCGAGAAAAA GGCG AAAT CGCC CAGTGCACCGATAAA YPTB2016 2374105 - 2373053 - | putative ABC transporter, ATP-binding subunit YPTB2017 2374304 - 2375134 + | hypothetical protein YPTB2018 2375106 - 2376260 + | putative transcriptional regulatory protein TERM 2524 2376378 - 2376365 - f 76 -2.5 -5.252 | opp_overlap 2376358 TACTGGTATAAAAAA TTTAT TGAT ATAAA ACAGTGATTGATACA TERM 2525 2376487 - 2376507 + F 87 -8.2 -4.56978 | opp_overlap 2376487 GATGCAAAAGAAAAA CCCCAACC ATAAA GGTCGGGG TTTATTATTTGGCGG TERM 2526 2376507 - 2376487 - f 100 -10.4 -5.48213 | opp_overlap 2376487 GATGCAAAAGAAAAA CCCCAACC ATAAA GGTCGGGG TTTATTATTTGGCGG TERM 2527 2376726 - 2376742 + F 73 -7.3 -4.16016 | overlap 2376718 AAAGTTATAGCAATT TGCTGAT TTC ATCGGCA TTTATTGAGGGATAC YPTB2019 2376895 - 2377632 + | putative hydrolase YPTB2020 2377669 - 2378229 + | hypothetical protein TERM 2528 2378451 - 2378483 + T 76 -7.8 -4.19817 | overlap 2378452 TAGATTCATCGGGAT GCATTCGCTTGC TGTTTTGTT GCAAGCGAATGA TTTTGGGTAGATGGG TERM 2529 2378452 - 2378482 + T 84 -11.3 -3.11569 | overlap 2378451 AGATTCATCGGGATG CATTCGCTTGC TGTTTTGTT GCAAGCGAATG ATTTTGGGTAGATGG YPTB2021 2379089 - 2378526 - | hypothetical protein TERM 2530 2378960 - 2378972 + g 71 -4.9 -4.62302 | TACCGATCTGTTTTT CATAA TTA TTATG TTTTTGCAGGTATTC TERM 2531 2379508 - 2379461 - R 79 -10.8 -3.14931 | gap 1, opp_overlap 2379473 CGTATGCGCGAGGAA TGT-GCTTATCAACCGGAAAGGC AAA ACGTCTCCGGTTGATAAGGGACA TAACGTTAGCTGCTG yceL 2380719 - 2379514 - | multidrug resistance protein MdtH rimJ 2381013 - 2381597 + | ribosomal-protein-S5-alanine N-acetyltransferase TERM 2532 2382252 - 2382215 - g 82 -5.5 -5.0133 | opp_overlap 2382237, overlap 2382217 TAGCCCTTGAAAAAA CAGCCCTTGAAGCTAGG GTTG CCCAGCTTGAACAGCAG GTTATCCAGTTGTCA YPTB2024 2381605 - 2382306 + | hypothetical protein TERM 2533 2382501 - 2382515 + G 85 -7.1 -4.88736 | TGGATACGCTCGCTG CGGCA AGTGA TGCCG TTTTTGTCCATAGTA YPTB2025 2382317 - 2383228 + | putative oxidoreductase TERM 2534 2383431 - 2383457 + F 71 -8.7 -3.34894 | opp_overlap 2383435, overlap 2383429 2383432 2383435 CCCCCATTGGGTAGA GCAACGCCTGC AGACC GTAGGCGTTGG TATTTACAGCACATT TERM 2535 2383432 - 2383456 + F 83 -12.2 -2.60615 | opp_overlap 2383435, overlap 2383431 2383429 2383435 CCCCATTGGGTAGAG CAACGCCTGC AGACC GTAGGCGTTG GTATTTACAGCACAT TERM 2536 2383602 - 2383614 + G 89 -6.2 -5.28826 | ATTTGGTGCAGGTAT GGCG ACGGA CGCC TTTTTTGTGGCATTT mviN 2383495 - 2385030 + | virulence factor mviN, MOP superfamliy efflux pump TERM 2537 2385105 - 2385121 + F 100 -9.4 -5.18561 | opp_overlap 2385105 ACAATGTATTATATA GCCCGA TAATT TCGGGC TTTTTTACATATTTA TERM 2538 2385121 - 2385105 - f 71 -9.4 -2.96538 | opp_overlap 2385105 ACAATGTATTATATA GCCCGA TAATT TCGGGC TTTTTTACATATTTA TERM 2539 2385350 - 2385368 + F 77 -4.6 -5.0133 | TTTGTTTTTTTTTAA CGTGTATT TTT AATGCATG TTTTTTAAAAAACTA TERM 2540 2385396 - 2385381 - f 70 -2.6 -5.00884 | overlap 2385382 ATGTTTTTTAAAAAA CTAAAC TTTG GTTTAA CCCGCACATCTAGTG TERM 2541 2386203 - 2386246 + G 77 -8.2 -4.30576 | opp_overlap 2386219, overlap 2386194 2386207 2386209 TGGCAAGCAAGAGTG TCACTGGCTTTAGATAGCCC ATTT GGGCTATCTGACGCTATTAA TTTTAATGCTAACCG TERM 2542 2386207 - 2386242 + G 93 -13.4 -3.72743 | opp_overlap 2386219, overlap 2386194 2386203 2386209 AAGCAAGAGTGTCAC TGGCTTTAGATAGCCC ATTT GGGCTATCTGACGCTA TTAATTTTAATGCTA TERM 2543 2386209 - 2386240 + G 91 -13.8 -3.43546 | opp_overlap 2386219, overlap 2386194 2386207 2386203 GCAAGAGTGTCACTG GCTTTAGATAGCCC ATTT GGGCTATCTGACGC TATTAATTTTAATGC TERM 2544 2387023 - 2387039 + G 89 -5.9 -5.21709 | opp_overlap 2387023 GTGCCGGGATATCAA TGCGTTA CCA TAATGCA TTTTTTGATGTGGAA HlyB 2385477 - 2387138 + | hemolysin activator protein HlyB TERM 2545 2389496 - 2389510 + G 75 -5.7 -4.56597 | opp_overlap 2389494 2389496 GTGATAATAAACACA CCCAA AAATA TTGGG TTTTTCACCGCAAAA HlyA 2387168 - 2392063 + | putative hemolysin HlyA TERM 2546 2392104 - 2392117 + T 100 -9.5 -5.07107 | CTAATCGTTTTTTAA GGCCC CGAG GGGCC TTTTTTGACGATTTA TERM 2547 2392145 - 2392171 + T 74 -8 -3.93658 | TTACATCCGCTCAAC GGTTTGAATACC CAA GGTATCCAGGCC TTGTTTCAGCGTCTT argS 2393860 - 2392130 - | arginyl-tRNA synthetase YPTB2030 2394413 - 2394988 + | hypothetical protein TERM 2548 2395393 - 2395410 + G 74 -2.7 -5.06414 | gap 1, overlap 2395397 GGTTCATCCGATAGT TCGGCCAC GTG GTGG-TGA TTTTTGTTACAGCAG cutC 2395220 - 2395984 + | copper homeostasis protein CutC TERM 2549 2396147 - 2396171 + T 100 -10 -4.80959 | ATATAACGAACGGTA TCCCCCATCT GGGTG AGTTGGGGGA TTTTCTTATGGCTTA YPTB2032 2397148 - 2396177 - | hypothetical protein YPTB2033 2397948 - 2397145 - | hypothetical protein TERM 2550 2397225 - 2397241 + g 70 -2.1 -4.94992 | opp_overlap 2397224, overlap 2397226 CCGCGTGTTCAAACC CCGCCTG ATG CAGACGA TTTTTGTGGGTTTCC TERM 2551 2398079 - 2398063 - R 100 -10.8 -4.46072 | GGGAATAAACATAAA GGCGGC GATAT GCCGCC CAGACTAACGGTTGC YPTB2034 2398534 - 2398139 - | hypothetical protein YPTB2035 2399529 - 2398714 - | hypothetical protein TERM 2552 2400307 - 2400280 - H 77 -8.6 -3.92542 | opp_overlap 2400283, overlap 2400283 CTGAGGTTGAAACAA TAACGCGTTA ATACAACA TAACGCGTTA ATAAAACAATAAAGT TERM 2553 2400601 - 2400614 + G 73 -2.3 -5.16841 | TAACCGTCGTCGTGA TCTGG GTGG CCTGA TTTTTATTGATATGC aspS 2400515 - 2402311 + | aspartyl-tRNA synthetase TERM 2554 2402678 - 2402692 + G 78 -11.4 -3.0263 | ACCAGTGGTTGGATG CGGCAG AGG CTGCCG TATTGACCAAGTCCT ntpA 2402311 - 2402754 + | dATP pyrophosphohydrolase TERM 2555 2402859 - 2402845 - g 75 -5.6 -4.66537 | overlap 2402847 2402855 TGGGCCAACACAAAA CACCGC AAA GCGGCA CAGGATGCCAAACGC TERM 2556 2402857 - 2402847 - g 73 -8.2 -3.94773 | overlap 2402845 2402855 GGCCAACACAAAACA CCGC AAA GCGG CACAGGATGCCAAAC YPTB2038 2402812 - 2403555 + | hypothetical protein ruvC 2403764 - 2404285 + | Holliday junction resolvase TERM 2557 2404343 - 2404324 - f 83 -12.2 -2.79831 | opp_overlap 2404324 2404339 TTAACTGTTATCACA GGCTGGAT ATCC ATCCAGCC TTTTTTATGCTATAA TERM 2558 2404324 - 2404343 + F 100 -12.2 -5.34555 | opp_overlap 2404324, overlap 2404339 TTAACTGTTATCACA GGCTGGAT ATCC ATCCAGCC TTTTTTATGCTATAA TERM 2559 2404645 - 2404628 - g 77 -6.3 -4.58663 | gap 1 ATCATTCTGGAAAAA CAGCCACC GCT GGTG-CTG CTGGAAACAAACGGT TERM 2560 2404962 - 2404948 - g 73 -5.6 -4.56597 | opp_overlap 2404950, overlap 2404950 GGGTGTCGGTAAAAA GACCGC CGA GCGGTT AGTGGTCGAAATGAA TERM 2561 2404960 - 2404950 - g 73 -8.2 -3.90048 | opp_overlap 2404950, overlap 2404948 GTGTCGGTAAAAAGA CCGC CGA GCGG TTAGTGGTCGAAATG ruvA 2404592 - 2405206 + | Holliday junction DNA helicase motor protein ruvB 2405368 - 2406372 + | Holliday junction DNA helicase B TERM 2562 2406369 - 2406427 + T 72 -9.8 -2.85803 | gap 1, opp_overlap 2406373 2406375, overlap 2406353 TATTACTCGGGAAGA ATAATACGTTTCACGCTGTGGGGGTTA TAGACC TAAACCCCACAGCGTGAAGTG-ATGAC TATCCTCGTGCTTTT TERM 2563 2406423 - 2406373 - T 89 -10.6 -3.94877 | gap 1, opp_overlap 2406353 2406369, overlap 2406375 ACTCGGGAAGAATAA TACGTTTCACGCTGTGGGGGTTA TAGACC TAAACCCCACAGCGTGAAGTG-A TGACTATCCTCGTGC TERM 2564 2406422 - 2406375 - T 100 -15.7 -3.56318 | opp_overlap 2406369, overlap 2406373 TCGGGAAGAATAATA CGTTTCACGCTGTGGGGGTTA TAGACC TAAACCCCACAGCGTGAAGTG ATGACTATCCTCGTG znuB 2407212 - 2406427 - | high-affinity zinc transporter membrane component TERM 2565 2407155 - 2407142 - G 75 -5.9 -4.61566 | CGCCAAACGACAAAA GACCC CAGC GGGCC AGCGGCTGTTGCCAG znuC 2407967 - 2407209 - | high-affinity zinc transporter ATPase TERM 2566 2407657 - 2407673 + g 74 -4.3 -5.00616 | opp_overlap 2407636 TGCACCCGTGTGAGT GCAGGCA GAA TGTCGGC TTTTTTCACCCCCGG znuA 2408043 - 2408999 + | high-affinity zinc transporter periplasmic component TERM 2567 2409068 - 2409094 + G 73 -10.1 -3.14468 | TATAACAATCTTCCT CGACCCCATCG CATCA TGTTGGGGTCG TTGACTGTAATGACA TERM 2568 2409112 - 2409132 + G 83 -8.2 -4.60797 | GACTGTAATGACACT GGCCGTCG CTGTT TGGCGGCC TTTTATCTATCACCC YPTB2045 2409020 - 2410336 + | hypothetical protein TERM 2569 2410343 - 2410366 + F 73 -8.8 -3.5511 | overlap 2410341 2410345 CTGGATTAGCAGTGA TACCGTCAGG TTAG CCTGTCGGTG TGTTTATCCCTAAGC TERM 2570 2410345 - 2410364 + F 74 -9.2 -3.34988 | overlap 2410343 2410341 GGATTAGCAGTGATA CCGTCAGG TTAG CCTGTCGG TGTGTTTATCCCTAA TERM 2571 2410376 - 2410410 + F 100 -15.2 -3.74077 | overlap 2410381 TCGGTGTGTTTATCC CTAAGCTGCCAGTG AGTTGAG CACTGGCAGTTTAG TTTCAGTCTGTCAGC TERM 2572 2410381 - 2410405 + F 100 -11.5 -4.09556 | overlap 2410376 GTGTTTATCCCTAAG CTGCCAGTG AGTTGAG CACTGGCAG TTTAGTTTCAGTCTG msbB 2410603 - 2411565 + | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase TERM 2573 2411686 - 2411665 - T 100 -15.9 -4.36595 | opp_overlap 2411661 2411660 CAGTTAAAGGTAAAA GGCCCGCTA GTGA TAGCGGGCC TGAGGTTATTGACAA TERM 2574 2411764 - 2411790 + T 72 -10.1 -2.88849 | gap 1, opp_overlap 2411753, overlap 2411759 2411765 ACATCCATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCTCTGCC TERM 2575 2411765 - 2411791 + T 84 -10.1 -3.82218 | gap 1, opp_overlap 2411753, overlap 2411759 2411764 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCTCTGCCT TERM 2576 2411849 - 2411880 + T 100 -10.8 -4.46757 | overlap 2411854 GGGGTTTGTCAGCAG TCTGAGGCCCGCTA GTGA TAGCGGGCCTTTGC TTTTCTGCCTATCTT TERM 2577 2411854 - 2411875 + T 100 -15.9 -4.27483 | overlap 2411849 TTGTCAGCAGTCTGA GGCCCGCTA GTGA TAGCGGGCC TTTGCTTTTCTGCCT pykA 2413347 - 2411905 - | pyruvate kinase TERM 2578 2412493 - 2412543 + g 71 -3.9 -4.68908 | gap 1, overlap 2412501 CATTGACTCCATCAT CTGAGTCGCCGTGATC-ACGGC ACGGTTTA GCTGGCGGGCACGGCGGATCAG TTTCTTTTGGATACC hexR 2414578 - 2413709 - | DNA-binding transcriptional regulator HexR zwf 2414940 - 2416415 + | glucose-6-phosphate 1-dehydrogenase TERM 2579 2416469 - 2416434 - f 78 -9.7 -3.42574 | overlap 2416436 2416437 CTAACCGCACGATAA TAGCGCGCCACCAGA GGCGAA TCTGATGGCGCGTGA CTGCCAGGGAGAGCA TERM 2580 2416467 - 2416436 - f 95 -12.3 -3.28219 | overlap 2416434 2416437 AACCGCACGATAATA GCGCGCCACCAGA GGCGAA TCTGATGGCGCGT GACTGCCAGGGAGAG TERM 2581 2416466 - 2416437 - f 100 -15.8 -2.56449 | overlap 2416436 2416434 ACCGCACGATAATAG CGCGCCACCAGA GGCGAA TCTGATGGCGCG TGACTGCCAGGGAGA eda 2416657 - 2417298 + | keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase TERM 2582 2417351 - 2417377 + F 100 -11.6 -5.03314 | opp_overlap 2417351 2417349 2417355 2417356, overlap 2417356 TATTTTCACCAAAGA CAGAGCCTCTGC ATT GCAGGGGTTTTG TTTTTTCAGAATCGC TERM 2583 2417356 - 2417372 + F 100 -10.1 -5.42198 | opp_overlap 2417351 2417356 2417355 2417349, overlap 2417351 TCACCAAAGACAGAG CCTCTGC ATT GCAGGGG TTTTGTTTTTTCAGA YPTB2051 2417992 - 2418456 + | DMT superfamily drug efflux pump YPTB2052 2418443 - 2418772 + | multidrug efflux system protein MdtI TERM 2584 2418819 - 2418792 - T 70 -9.8 -2.52015 | opp_overlap 2418793, overlap 2418791 GCCAGAGGCAGTAAG CGGAGGGTAGCC TGGC GGCTACTCTCCT TTGTTTTTGTGGCTT TERM 2585 2418793 - 2418818 + T 100 -15.5 -4.97405 | opp_overlap 2418792 2418791 CCAGAGGCAGTAAGC GGAGGGTAGCC TGGC GGCTACTCTCC TTTGTTTTTGTGGCT YPTB2053 2419282 - 2418938 - | hypothetical protein TERM 2586 2419975 - 2419962 - g 74 -9.5 -3.53012 | TGTTTTGTGGTGAAA GCCCG TCGT CGGGC GATGGATGCTGATGT TERM 2587 2419991 - 2420010 + G 100 -10 -4.82901 | opp_overlap 2420003 GATGGATGCTGATGT GGTGGTGG TAAA CCACCATC TTTTTCTGGCGGACA TERM 2588 2420588 - 2420577 - g 78 -5.8 -4.7497 | opp_overlap 2420577 2420576 TTGATTGAGGAAAAA CCAG GCAC CTGG ATTTTTACCTCAGCG YPTB2054 2419413 - 2421317 + | DEAD box family helicase YPTB2055 2421389 - 2422087 + | hypothetical protein YPTB2056 2422224 - 2422829 + | putative lipoprotein TERM 2589 2422867 - 2422850 - f 100 -9.1 -4.82901 | gap 1 TTTGGGCCACAAAAA GGCGC-GG AGT CCAGCGCC TGAGGTTATTGACAA TERM 2590 2422946 - 2422972 + F 72 -7.2 -3.9749 | gap 1, opp_overlap 2422934, overlap 2422945 CATCCATGTAGGCTC GAG-CCGCGCC CTCCCT GGCGCGGACGC TTTACTCTTCTGCCT TERM 2591 2423035 - 2423052 + F 100 -12.7 -4.64844 | TTGTCAGCAGTCAGA GGCGCTG AGTC CAGCGCC TTTTCTATATCTACA fadD 2423483 - 2425171 + | long-chain-fatty-acid--CoA ligase TERM 2592 2425226 - 2425190 - f 100 -14.6 -3.767 | gap 1, opp_overlap 2425191 2425194, overlap 2425191 2425193 2425197 2425200 GACGGAGTCACTAAA TCATCAACAACGCCGGT TATC ACCGGCGTTGTTG-TGT TTGTTATCGAACTAT TERM 2593 2425225 - 2425191 - f 100 -18.1 -2.85699 | gap 1, opp_overlap 2425191 2425194, overlap 2425190 2425193 2425197 2425200 ACGGAGTCACTAAAT CATCAACAACGCCGGT TATC ACCGGCGTTGTTG-TG TTTGTTATCGAACTA TERM 2594 2425191 - 2425225 + F 100 -18.1 -4.31433 | gap 1, opp_overlap 2425190 2425191 2425193 2425197 2425200, overlap 2425194 ACGGAGTCACTAAAT CATCAACAACGCCGGT TATC ACCGGCGTTGTTG-TG TTTGTTATCGAACTA TERM 2595 2425224 - 2425193 - f 100 -17.4 -2.97667 | opp_overlap 2425191 2425194, overlap 2425191 2425190 2425197 2425200 GGAGTCACTAAATCA TCAACAACGCCGGT TATC ACCGGCGTTGTTGT GTTTGTTATCGAACT TERM 2596 2425194 - 2425223 + F 100 -20.9 -3.75817 | opp_overlap 2425193 2425191 2425190 2425197 2425200, overlap 2425191 GAGTCACTAAATCAT CAACAACGCCGGT TATC ACCGGCGTTGTTG TGTTTGTTATCGAAC TERM 2597 2425220 - 2425197 - f 100 -16.8 -3.34227 | opp_overlap 2425194 2425191, overlap 2425193 2425191 2425190 2425200 TCACTAAATCATCAA CAACGCCGGT TATC ACCGGCGTTG TTGTGTTTGTTATCG TERM 2598 2425217 - 2425200 - f 100 -12.7 -3.79909 | opp_overlap 2425194 2425191, overlap 2425197 2425193 2425191 2425190 CTAAATCATCAACAA CGCCGGT TATC ACCGGCG TTGTTGTGTTTGTTA TERM 2599 2426266 - 2426246 - g 77 -2.6 -5.24129 | opp_overlap 2426246, overlap 2426248 CCGGGGTACAAAAAA GTCTTTAA AGATA TTAAAGCC TTGATTCAATCGGTC rnd 2425331 - 2426452 + | ribonuclease D TERM 2600 2426475 - 2426504 + T 70 -10.1 -2.54204 | opp_overlap 2426470 2426472 2426493, overlap 2426474 2426473 2426500 2426501 TGATATTAATCAGCC TTCAGGGTGGGAT ATTA ATTCCACGCTGAA ACTTTTCAGTTTTAA TERM 2601 2426500 - 2426513 + T 73 -5.3 -4.61873 | opp_overlap 2426493 2426472, overlap 2426475 2426474 2426473 2426501 GATATTAATTCCACG CTGAA ACTT TTCAG TTTTAATTTATGAAC TERM 2602 2426677 - 2426646 - T 100 -17.5 -3.43117 | opp_overlap 2426649, overlap 2426649 ACAGTCAATTGAGAA TAACGCCCCTGTA AATAAA TACAGGGGCGTTA TTGAGAAGAAATCAT TERM 2603 2426649 - 2426674 + T 100 -14.8 -3.61517 | opp_overlap 2426646 2426649 GTCAATTGAGAATAA CGCCCCTGTA AATAAA TACAGGGGCG TTATTGAGAAGAAAT TERM 2604 2426674 - 2426649 - T 100 -14.8 -3.84808 | opp_overlap 2426649, overlap 2426646 GTCAATTGAGAATAA CGCCCCTGTA AATAAA TACAGGGGCG TTATTGAGAAGAAAT minE 2426958 - 2426689 - | cell division topological specificity factor MinE minD 2427774 - 2426962 - | cell division inhibitor MinD minC 2428485 - 2427799 - | septum formation inhibitor TERM 2605 2428155 - 2428170 + g 73 -4.6 -4.70879 | overlap 2428157 2428166 CCGGCGGACTGATGA CCGGCT CTGG AGCCAG TTTTTGGCCTTTACC TERM 2606 2428691 - 2428707 + H 74 -6.5 -4.55491 | TTGACCCCCTATATT TAGCGAC TCA GCCGCTA TTTTATGATTGCATA TERM 2607 2428711 - 2428722 + H 71 -3 -5.03145 | ACTCAGCCGCTATTT TATG ATTG CATA TTTTTTCAACACTTG YPTB2062 2429206 - 2429478 + | hypothetical protein YPTB2063 2429619 - 2430704 + | putative lipoprotein YPTB2064 2430775 - 2431431 + | hypothetical protein TERM 2608 2431470 - 2431439 - f 82 -7.9 -4.45693 | overlap 2431440 2431441 TAATATAAAGAGAAA CGTGCCGTCCGAC TTTACT GTCGGGCGGCAAA ACTTGCATCTGTAAG TERM 2609 2431469 - 2431440 - f 74 -9.2 -3.25789 | overlap 2431439 2431441 AATATAAAGAGAAAC GTGCCGTCCGAC TTTACT GTCGGGCGGCAA AACTTGCATCTGTAA TERM 2610 2431468 - 2431441 - f 86 -12.7 -2.53847 | overlap 2431440 2431439 ATATAAAGAGAAACG TGCCGTCCGAC TTTACT GTCGGGCGGCA AAACTTGCATCTGTA YPTB2065 2431534 - 2431980 + | hypothetical protein TERM 2611 2432014 - 2432035 + T 78 -8.7 -3.827 | TAACTTGCTTTAGCC GATGACAGC CTAA GCTGCCATC TTTACCTTCATTGTT YPTB2066 2433253 - 2432081 - | hypothetical protein TERM 2612 2432246 - 2432230 - G 82 -5.1 -5.0925 | overlap 2432232 GCGGAAAACCAAAAA TACCCAC GAA GTAGGCA ACGACAAACCAAGTC YPTB2067 2434456 - 2433257 - | putative aminotransferase YPTB2068 2435213 - 2434473 - | hypothetical protein TERM 2613 2436061 - 2436086 + H 70 -7.7 -3.65046 | opp_overlap 2436060 TTTTCTTTAATAGAT TCACTATTCCT GCGC AGGAATAATGA TTATTAACATAGCCA YPTB2069 2436305 - 2436661 + | hypothetical protein TERM 2614 2436713 - 2436748 + T 73 -8.5 -3.66378 | opp_overlap 2436712 2436707 2436713 ATTGACTAATGAAAC TCAGATCAACAGG GGATGGAAAA TCTGTTGATCTGA TTTCAATCCAATCTG TERM 2615 2437052 - 2437034 - T 100 -11.7 -4.98522 | opp_overlap 2437034 AATCTGATATAAAAA TGGCGCC AGAGA GGCGCCA TTGATAATAAAGATA TERM 2616 2437034 - 2437052 + T 84 -11.7 -3.21416 | opp_overlap 2437034 AATCTGATATAAAAA TGGCGCC AGAGA GGCGCCA TTGATAATAAAGATA dsbB 2437608 - 2437078 - | disulfide bond formation protein B nhaB 2439418 - 2437844 - | sodium/proton antiporter TERM 2617 2438067 - 2438055 - G 71 -4.7 -4.49316 | opp_overlap 2438056, overlap 2438056 AGCAGGAACAAGAAA GCGGC CTG GCCGT TTGGTGTCGCCACGG TERM 2618 2438056 - 2438066 + g 73 -8.2 -3.83026 | opp_overlap 2438056 2438055 GCAGGAACAAGAAAG CGGC CTG GCCG TTTGGTGTCGCCACG TERM 2619 2438254 - 2438243 - G 78 -5.8 -4.74917 | ATTAAACAGATAAAA CAGC GATA GCTG AGCGGAAGGCGAGGC TERM 2620 2438952 - 2438937 - G 75 -3.2 -5.00846 | overlap 2438938 TAAATAGTATAAAAA CCAACG GATA CGCTGA TAACTACCGCGATTA TERM 2621 2439085 - 2439074 - G 72 -5.8 -4.32857 | opp_overlap 2439074 TTTCGTAAATACAAA CAGC AGCA GCTG TTTCATAAAGTAGAT TERM 2622 2440049 - 2440031 - g 71 -3 -4.88736 | overlap 2440041 CATCATCCAGAAAAA GCGCAAGA AAT TTTGGCGC GAGCGAAAACAGTGG fadR 2439662 - 2440381 + | fatty acid metabolism regulator TERM 2623 2440552 - 2440568 + T 100 -10.1 -5.04385 | TTGTCAGCAGTTTGA GGGGCGT TTA ATGCCCC TTTTTTACCGATGTC YPTB2073 2442134 - 2440599 - | hypothetical protein TERM 2624 2441499 - 2441521 + g 74 -2.6 -5.0538 | CAGGGAATTCACTTG GCTTTGTAGA TAT TCTTCACGGC TTTTTTGGCGTGCGG TERM 2625 2443382 - 2443402 + G 78 -8.9 -3.97368 | overlap 2443378 CTACCGCGCTACTGG CCGGGCTGG TGT CTATCCCGG TTTATCCATTGAAGG TERM 2626 2443871 - 2443917 + G 81 -9.6 -3.98291 | opp_overlap 2443868, overlap 2443872 AGCCACTGAATATTG CCCCGTTACACGATATTCAC CCCATCC GTTAATATCGTGTAACGCGA TTATTTGCCGTTGTT TERM 2627 2443872 - 2443916 + G 83 -13.1 -2.9789 | opp_overlap 2443868, overlap 2443871 GCCACTGAATATTGC CCCGTTACACGATATTCAC CCCATCC GTTAATATCGTGTAACGCG ATTATTTGCCGTTGT dadA 2442598 - 2443902 + | D-amino acid dehydrogenase small subunit YPTB2075 2445124 - 2443931 - | putative MFS multidrug efflux antiporter TERM 2628 2445363 - 2445327 - R 100 -15.4 -5.5112 | CTCATCAATAAAAAA TGCTATTACCTGCCCA GAGGG TAGACAGGTAATAGCA GACAGGTAATGGCGG YPTB2076 2446258 - 2445389 - | hypothetical protein TERM 2629 2446228 - 2446249 + g 80 -2.9 -5.3671 | CCCAATGTTGACGAG GTGCACGGT AAAT ACCTTGAAC TTTTTTCATTATCTT YPTB2077 2446456 - 2447361 + | LysR family transcriptional regulator YPTB2078 2448514 - 2447396 - | DMT superfamliy Ni++ efflux protein TERM 2630 2448028 - 2448013 - G 71 -6.8 -4.20084 | AGCAGGCACCTAAAA TGGCCA GCGT CGGCCA TAATCCGGCAAATTG TERM 2631 2448610 - 2448572 - R 78 -5.3 -4.9792 | opp_overlap 2448572 TAGCCCATAGAAAAA GCCGGAAAATGCTTTCT GAACA AGAAAAAATTAACCGGC TGATATTGCTGCTAA YPTB2079 2449896 - 2448622 - | hypothetical protein TERM 2632 2449944 - 2450001 + r 74 -9.9 -3.14307 | gap 1 CCACCGGCCTCACAC TGTCCCTTTGTCCTTGGCGTTACAGC ATGGTTA GCGGCAACGCCAAGGACGTAGTG-CA TAGTTTTGCCTTCCT YPTB2080 2451980 - 2450046 - | hypothetical protein TERM 2633 2451722 - 2451750 + g 72 -10.4 -3.01712 | opp_overlap 2451720 GATAAGAAACAATCT GTTCTATGGCTT CCTCC ATGCCATAGAAC TCTTCAAACGCAGGA YPTB2081 2452403 - 2453173 + | hypothetical protein TERM 2634 2453203 - 2453219 + T 100 -13.7 -5.0916 | opp_overlap 2453203 2453200 2453198 CTATGAGCAAGACCA TGGGGCC AAA GGCCCCA TTTTTATATTGACCG TERM 2635 2453219 - 2453203 - T 93 -13.7 -2.78495 | opp_overlap 2453203, overlap 2453200 2453198 CTATGAGCAAGACCA TGGGGCC AAA GGCCCCA TTTTTATATTGACCG YPTB2082 2454121 - 2453246 - | hypothetical protein TERM 2636 2454418 - 2454401 - R 100 -11.3 -5.05116 | opp_overlap 2454401 CTATAAACAAGAAAA GCCACTC GCGT GAGTGGC TTTAGGTAGAAATCT TERM 2637 2454401 - 2454418 + r 90 -11.3 -3.65529 | opp_overlap 2454401 CTATAAACAAGAAAA GCCACTC GCGT GAGTGGC TTTAGGTAGAAATCT gapA 2455440 - 2454445 - | glyceraldehyde-3-phosphate dehydrogenase TERM 2638 2455708 - 2455726 + H 82 -2.4 -5.70522 | CAGTTTAGGACAATT TTAACTGC TTT GTTGTTAA TTTTTTGTTATTATT YPTB2084 2455788 - 2456201 + | methionine sulfoxide reductase B YPTB2085 2456272 - 2456544 + | hypothetical protein TERM 2639 2456638 - 2456659 + T 100 -13 -4.56597 | opp_overlap 2456638 TCTGAATACAAAAAA TGGGCGCC GAGGCA GGCGCCCA TTTTTGCGCAGAAAG TERM 2640 2456659 - 2456638 - T 100 -13 -5.47159 | opp_overlap 2456638 TCTGAATACAAAAAA TGGGCGCC GAGGCA GGCGCCCA TTTTTGCGCAGAAAG TERM 2641 2456681 - 2456706 + T 75 -10.5 -2.76696 | gap 1, opp_overlap 2456678, overlap 2456680 CGCAGAAAGCGATCA GTC-GGCTGAAG CGA CTTCAGCCAGGC ATTGTTCAAGAGCCA pncA 2457325 - 2456678 - | nicotinamidase/pyrazinamidase ansA 2458356 - 2457340 - | cytoplasmic asparaginase I TERM 2642 2458422 - 2458445 + r 77 -11 -2.80789 | opp_overlap 2458423, overlap 2458421 2458419 GCTCAGCGAGGAAAA ACAGCCCGAT GGGT ATCGGGCTGA ATATTTATCTGTATT TERM 2643 2458444 - 2458423 - R 100 -14.5 -4.7497 | opp_overlap 2458422 2458421 2458419 CTCAGCGAGGAAAAA CAGCCCGAT GGGT ATCGGGCTG AATATTTATCTGTAT sppA 2460323 - 2458473 - | protease 4 YPTB2089 2460486 - 2461037 + | hypothetical protein TERM 2644 2461452 - 2461464 + G 89 -3.4 -5.61596 | ACGGTGTTGGCATTA TCAG CACGA CTGA TTTTTTTATGCCGAT selD 2461262 - 2462308 + | selenophosphate synthetase topB 2462367 - 2464295 + | DNA topoisomerase III YPTB2092 2464292 - 2464582 + | hypothetical protein nudG 2464981 - 2464595 - | pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase xthA 2465885 - 2465079 - | exonuclease III TERM 2645 2465660 - 2465672 + g 78 -9.1 -4.015 | GGAAACCTCGGCGCA CAGCC AGT GGCTG TTCTTTCGTCAATAG TERM 2646 2465738 - 2465726 - G 75 -3.3 -5.0538 | GCCCATGGTAAAAAA CGTGG TAA CCATG CTGGCTGACGTCTTC TERM 2647 2466848 - 2466836 - g 87 -6.3 -5.17054 | ATAATAGGGAAAAAA CTCTT TAA AAGAG AGAAATTTGGCATGA TERM 2648 2467240 - 2467215 - g 71 -7.1 -4.03137 | gap 1, opp_overlap 2467222 ATATAATTAATGAAA GTGAAG-ATATT ATA AATATTCTTCAC AGTAATGTTTGGTTA YPTB2095 2466695 - 2467555 + | LysR family transcriptional regulator TERM 2649 2468979 - 2469000 + G 79 -10.1 -3.74693 | TTTATTATCGAGTTC GGTGACCGC CTGA GCGATCACC TTTAATACGGTGGCA YPTB2096 2467797 - 2469005 + | putative transposase purU 2470615 - 2469767 - | formyltetrahydrofolate deformylase YPTB2098 2471163 - 2470699 - | hypothetical protein TERM 2650 2471692 - 2471712 + H 95 -7.6 -4.9138 | opp_overlap 2471694 AATGTTTACGCTGAA TAGCCACC TTTAT GGTGGTTA TTTTGTTTGCGTACT YPTB2099 2472497 - 2473513 + | response regulator of RpoS YPTB2100 2473820 - 2475166 + | putative nucleotide sugar dehydrogenase TERM 2651 2475568 - 2475545 - T 100 -15.4 -5.88197 | opp_overlap 2475545 TGAAAGACAAAAAAA CACCCTCCTA TTAA TAGGAGGGTG TTTCGATAGTAATAG TERM 2652 2475545 - 2475568 + T 100 -15.4 -3.69323 | opp_overlap 2475545 TGAAAGACAAAAAAA CACCCTCCTA TTAA TAGGAGGGTG TTTCGATAGTAATAG hns 2476008 - 2475601 - | global DNA-binding transcriptional dual regulator H-NS TERM 2653 2475725 - 2475747 + g 77 -10.6 -3.5394 | overlap 2475731 2475744 TTATACTGATATTTA GCAGGACGTG CAG CACGTTTTGC TTTACCAGCAGCTTT TERM 2654 2475731 - 2475741 + g 77 -6.8 -4.54727 | overlap 2475725 TGATATTTAGCAGGA CGTG CAG CACG TTTTGCTTTACCAGC tdk 2476758 - 2477348 + | thymidine kinase TERM 2655 2478008 - 2478049 + T 86 -6 -5.27477 | gap 2, opp_overlap 2478014, overlap 2478009 2478014 TAATTGGTCTGTAAA AGA-A-AACCCCCGATCAGC GGCT GCTCATCGGGGGTTATATCA TTTTTTGCTTACCCT TERM 2656 2478009 - 2478048 + T 81 -9.5 -3.75402 | gap 2, opp_overlap 2478014, overlap 2478008 2478014 AATTGGTCTGTAAAA GA-A-AACCCCCGATCAGC GGCT GCTCATCGGGGGTTATATC ATTTTTTGCTTACCC TERM 2657 2478041 - 2478014 - T 100 -15.6 -5.07652 | opp_overlap 2478014 2478009 2478008 GTCTGTAAAAGAAAA CCCCCGATCAGC GGCT GCTCATCGGGGG TTATATCATTTTTTG TERM 2658 2478014 - 2478041 + T 100 -15.6 -3.74447 | opp_overlap 2478014, overlap 2478009 2478008 GTCTGTAAAAGAAAA CCCCCGATCAGC GGCT GCTCATCGGGGG TTATATCATTTTTTG adhE 2480774 - 2478099 - | bifunctional acetaldehyde-CoA/alcohol dehydrogenase TERM 2659 2478983 - 2479018 + g 78 -9.1 -4.10007 | opp_overlap 2478994, overlap 2478994 AACCGGTACCTGATG TGGTTGTAATAGCGA CCAATT TCGCTTTTACACCCA TTTTCGGGAACTTAT TERM 2660 2480296 - 2480330 + g 80 -8.7 -4.33621 | gap 2, opp_overlap 2480282 2480281, overlap 2480325 TCCGCTGGCGCACCT GCTGC-GATAGCG-GCT TGA AGCACGATATCCGCAGC TTTATTGGTTGCGTC TERM 2661 2481590 - 2481600 + H 74 -4 -5.08088 | overlap 2481584 GTTATAATGCACTGT TATC GGT GATA TTTTTATTAGCAATT YPTB2104 2481630 - 2482274 + | hypothetical protein TERM 2662 2482295 - 2482330 + F 80 -2.6 -5.49809 | gap 1, overlap 2482296 ACCATTCAGAATTTT CGAG-AGGCCACTGA ACTATTC TTGGTGGCCTTCTCC TTTTTTTCCGCTTTG TERM 2663 2482700 - 2482687 - f 73 -2.5 -5.24531 | ATTCTGCATAAAAAA TATTT TAGT AAATA AATTCAATATGTTAT oppA 2483112 - 2484749 + | ABC transporter, periplasmic oligopeptide-binding protein oppA TERM 2664 2485245 - 2485263 + G 71 -3.1 -4.92757 | overlap 2485248 TGGGTTTTGCGATGA CTGGG GTCGTCATA CCCAG TTTTGTTGTTGCTCC oppB 2484836 - 2485756 + | oligopeptide transporter permease oppC 2485775 - 2486680 + | ABC oligopeptide transporter, permease subunit oppC TERM 2665 2487467 - 2487479 + G 71 -6.3 -4.20783 | ATCATCCAAGCCACC CCTAT TCG ATAGG TTTATTGAATGCCGT oppD 2486692 - 2487693 + | oligopeptide transporter ATP-binding component TERM 2666 2488652 - 2488662 + G 73 -8.2 -3.794 | ATTAGAAGGGAGTTT CCGC CAC GCGG TTTCGTGCCTTAAAG oppF 2487690 - 2488691 + | ABC oligopeptide transporter, ATP-binding subunit oppF TERM 2667 2489162 - 2489178 + T 77 -4.5 -5.05228 | opp_overlap 2489125 2489157 2489162 ATTGACGAATTAAAA CATATTA AGT TAATGTG TTTTTGTCATTTAAT TERM 2668 2489568 - 2489601 + T 100 -16.9 -3.80114 | overlap 2489569 GGGCTGCTCTTGCTC ACCTCAGTCACTTAG TTAT CTAAGTGACTGAGGA TTTACTCGATTGCTG TERM 2669 2489569 - 2489600 + T 100 -20.4 -2.87586 | overlap 2489568 GGCTGCTCTTGCTCA CCTCAGTCACTTAG TTAT CTAAGTGACTGAGG ATTTACTCGATTGCT TERM 2670 2489717 - 2489749 + T 71 -9.1 -3.31416 | opp_overlap 2489716 2489718, overlap 2489720 AAGGATAATTAAGAT ACATTGCCCCGGGGT TGA ACTATGGGGCAATGA TTAACTCTTTATTTT TERM 2671 2489720 - 2489746 + T 70 -9.4 -2.8084 | opp_overlap 2489718 2489716, overlap 2489717 GATAATTAAGATACA TTGCCCCGGGGT TGA ACTATGGGGCAA TGATTAACTCTTTAT YPTB2110 2490098 - 2489775 - | dsDNA-mimic protein cls 2491723 - 2490263 - | cardiolipin synthetase YPTB2112 2492040 - 2491792 - | hypothetical protein TERM 2672 2491941 - 2491967 + g 71 -10.1 -2.88849 | gap 1, opp_overlap 2491930, overlap 2491936 2491942 ACATCCATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCTCTGCC TERM 2673 2491942 - 2491968 + g 82 -10.1 -3.82218 | gap 1, opp_overlap 2491930, overlap 2491936 2491941 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCTCTGCCT TERM 2674 2492363 - 2492379 + H 100 -8.7 -5.48213 | opp_overlap 2492362 2492365 ATTATGGTAATAAGG CAGTCTC TAT GAGGCTG TTTTTGTTTTGAATC YPTB2113 2492783 - 2493322 + | attachment invasion locus protein precursor YPTB2114 2493542 - 2493805 + | hypothetical protein TERM 2675 2493888 - 2493849 - T 100 -11 -6.15536 | opp_overlap 2493851 2493853 2493856 2493859, overlap 2493850 2493851 AATTAACAAAAAAAA CTTATAATAATACGCCTA GCTT TAGGCGTATTATTATATC TAGTGTCTACAACCG TERM 2676 2493887 - 2493850 - T 100 -14.5 -4.25661 | opp_overlap 2493851 2493853 2493856 2493859, overlap 2493849 2493851 ATTAACAAAAAAAAC TTATAATAATACGCCTA GCTT TAGGCGTATTATTATAT CTAGTGTCTACAACC TERM 2677 2493851 - 2493886 + T 100 -18 -2.88999 | opp_overlap 2493851 2493850 2493849, overlap 2493853 2493856 2493859 TTAACAAAAAAAACT TATAATAATACGCCTA GCTT TAGGCGTATTATTATA TCTAGTGTCTACAAC TERM 2678 2493886 - 2493851 - T 100 -18 -3.12957 | opp_overlap 2493851 2493853 2493856 2493859, overlap 2493850 2493849 TTAACAAAAAAAACT TATAATAATACGCCTA GCTT TAGGCGTATTATTATA TCTAGTGTCTACAAC TERM 2679 2493853 - 2493884 + T 100 -16.2 -2.99545 | opp_overlap 2493851 2493850 2493849, overlap 2493851 2493856 2493859 AACAAAAAAAACTTA TAATAATACGCCTA GCTT TAGGCGTATTATTA TATCTAGTGTCTACA TERM 2680 2493856 - 2493881 + T 100 -13.5 -3.63762 | opp_overlap 2493851 2493850 2493849, overlap 2493853 2493851 2493859 AAAAAAAACTTATAA TAATACGCCTA GCTT TAGGCGTATTA TTATATCTAGTGTCT TERM 2681 2493859 - 2493878 + T 90 -10.8 -3.94067 | opp_overlap 2493851 2493850 2493849, overlap 2493856 2493853 2493851 AAAAACTTATAATAA TACGCCTA GCTT TAGGCGTA TTATTATATCTAGTG YPTB2115 2494165 - 2493836 - | hypothetical protein YPTB2116 2494699 - 2494403 - | YciI-like protein tonB 2495000 - 2495746 + | transport protein TonB TERM 2682 2495768 - 2495785 + T 100 -14.1 -4.12603 | CTGTCACCAACCTCA GGGCCGC TTTT GCGGCCC TTCTTGTTTAATCAA YPTB2118 2496264 - 2495815 - | acyl-CoA thioester hydrolase ispZ 2496886 - 2496344 - | intracellular septation protein A YPTB2120 2497117 - 2498856 + | sulfate permease family protein TERM 2683 2498902 - 2498924 + T 100 -16.4 -4.68593 | TGTCTACAGTTTGAA CGCCTGATGT AAT ACATCAGGCG TTTTTGAATGATACA YPTB2121 2499747 - 2498977 - | hypothetical protein YPTB2122 2499909 - 2500124 + | hypothetical protein TERM 2684 2500175 - 2500155 - f 73 -8.4 -3.57715 | AAAAGATACGAAAGA TGTGATCT CGATT AGATCACA AATACTCATTTGTAG TERM 2685 2500226 - 2500178 - f 100 -13.6 -4.03078 | gap 1, overlap 2500180 2500181 CGATTAGATCACAAA TACTCATTTGTAGGTATATTCAC CCCC GTAAATATACCTACAAATG-GAA TGGATAATGAAAAAA TERM 2686 2500224 - 2500180 - f 100 -16.2 -3.60505 | gap 1, overlap 2500178 2500181 ATTAGATCACAAATA CTCATTTGTAGGTATATTCAC CCCC GTAAATATACCTACAAATG-G AATGGATAATGAAAA TERM 2687 2500224 - 2500181 - f 100 -16.4 -2.7558 | overlap 2500180 2500178 TTAGATCACAAATAC TCATTTGTAGGTATATTCAC CCCC GTAAATATACCTACAAATGG AATGGATAATGAAAA ompW 2500233 - 2500868 + | outer membrane protein W TERM 2688 2500978 - 2501010 + T 100 -10.6 -5.30155 | gap 1, opp_overlap 2500984, overlap 2500982 2500984 CATCAGTTAGGCGGG CAGTAAGGAGGCGCG GTTA TGCGCCTCCTC-CTG TTTTTTACTTAATCA TERM 2689 2500982 - 2501007 + T 79 -11.1 -3.14982 | opp_overlap 2500984, overlap 2500978 2500984 AGTTAGGCGGGCAGT AAGGAGGCGCG GTTA TGCGCCTCCTC CTGTTTTTTACTTAA TERM 2690 2500984 - 2501005 + T 100 -13.7 -3.11487 | opp_overlap 2500984, overlap 2500982 2500978 TTAGGCGGGCAGTAA GGAGGCGCG GTTA TGCGCCTCC TCCTGTTTTTTACTT TERM 2691 2501005 - 2500984 - T 95 -13 -3.14564 | opp_overlap 2500984 2500982 2500978 TTAGGCGGGCAGTAA GGAGGCGC GGTTAT GCGCCTCC TCCTGTTTTTTACTT YPTB2124 2501329 - 2501015 - | putative lipoprotein TERM 2692 2501583 - 2501551 - R 76 -7.8 -4.13343 | overlap 2501553 AGAAATGGCTGAAAA TAGCGCCTGTTT CATGTAAAC AAACAGGCGCTG AAGGGCGGTAATGAC TERM 2693 2501581 - 2501553 - R 82 -10.4 -3.65832 | overlap 2501551 AAATGGCTGAAAATA GCGCCTGTTT CATGTAAAC AAACAGGCGC TGAAGGGCGGTAATG TERM 2694 2501678 - 2501689 + r 72 -7.2 -3.91196 | opp_overlap 2501675 AAATAATAACTAGCT GCGG GTTG CCGC TTTCATCTCTGTGAC trpA 2502478 - 2501672 - | tryptophan synthase subunit alpha TERM 2695 2501798 - 2501815 + g 80 -8.3 -4.4078 | opp_overlap 2501787 2501790 AATAGCACCCGCCGC GCCCGCC GCCA GGCTGGC TTTTACTTGCGCGGG trpB 2503668 - 2502478 - | tryptophan synthase subunit beta trpC 2505230 - 2503803 - | bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase trpD 2506232 - 2505234 - | anthranilate phosphoribosyltransferase TERM 2696 2505408 - 2505426 + g 73 -5.2 -4.63932 | opp_overlap 2505408 TTTACCTTGTAACAA CCGTGCTA AAA TGTCACGG TTTTCTTCCGGCATA trpG 2506825 - 2506247 - | anthranilate synthase component II trpE 2508390 - 2506825 - | anthranilate synthase component I TERM 2697 2508466 - 2508452 - R 100 -11.4 -5.64274 | CTATCCATAAAAAAA CCCGCT ATT AGCGGG CTGAAGCAATCTGCA YPTB2131 2508568 - 2508506 - | hypothetical protein YPTB2132 2508725 - 2508597 - | hypothetical protein trpH 2508842 - 2509741 + | hypothetical protein YPTB2134 2509758 - 2510378 + | hypothetical protein TERM 2698 2510557 - 2510542 - f 83 -9 -4.16681 | AATATTAGTGTAAAA TGTCCG GCCA CGGACA AGTGTGTGTGCCAGT YPTB2135 2510708 - 2511742 + | 23S rRNA pseudouridylate synthase B TERM 2699 2511807 - 2511844 + T 75 -5.7 -4.63542 | gap 1, opp_overlap 2511807 2511808, overlap 2511811 TAGCGACGTGAATAA TGCTTATTGCCGCAGTTT TTT GGACTGCGGCAATAT-TA TTTTTAACGCTTATA TERM 2700 2511811 - 2511841 + T 100 -15.6 -4.42235 | opp_overlap 2511807 2511808, overlap 2511807 GACGTGAATAATGCT TATTGCCGCAGTTT TTT GGACTGCGGCAATA TTATTTTTAACGCTT btuR 2512455 - 2511865 - | cob(I)yrinic acid a,c-diamide adenosyltransferase YPTB2137 2513233 - 2512472 - | short chain dehydrogenase TERM 2701 2512616 - 2512629 + g 75 -8.1 -4.21439 | overlap 2512624 ATCTTCATCGGGGAA TGCGG TCGC CCGCA TTTGTGTTCGGGTTC TERM 2702 2513743 - 2513778 + G 90 -12.8 -3.67 | gap 1, overlap 2513741 2513747 AGGGAGCATTGGGGC GCAGGAGGTCTCTTCAT TAC GTGAAGAGATCTC-TGC TATTTTGGCCGTTGC TERM 2703 2513747 - 2513775 + G 86 -13.3 -2.93891 | overlap 2513743 2513741 AGCATTGGGGCGCAG GAGGTCTCTTCAT TAC GTGAAGAGATCTC TGCTATTTTGGCCGT TERM 2704 2513928 - 2513940 + G 77 -10.5 -3.54951 | opp_overlap 2513925, overlap 2513939 CGGTTGATAAAGTTG CCGCC AGT GGCGG TTATATGATGGCCTG sohB 2513405 - 2514451 + | putative periplasmic protease TERM 2705 2514514 - 2514483 - T 73 -7.3 -4.18488 | opp_overlap 2514483 2514484, overlap 2514484 AGTGATGGCAATAAA TGCAGGGGGTA ATCTGAACGG TACCCCCTGCT ATTTGCTACCAACCC TERM 2706 2514484 - 2514513 + T 83 -10.8 -3.44848 | gap 1, opp_overlap 2514484 2514483, overlap 2514483 GTGATGGCAATAAAT GCAGGGGGTAATC TGAAC GGT-ACCCCCTGC TATTTGCTACCAACC TERM 2707 2514513 - 2514484 - T 79 -10.8 -3.10611 | opp_overlap 2514483 2514484, overlap 2514483 GTGATGGCAATAAAT GCAGGGGGTA ATCTGAACGG TACCCCCTGC TATTTGCTACCAACC YPTB2139 2514821 - 2514570 - | hypothetical protein TERM 2708 2515217 - 2515203 - H 80 -5 -5.13344 | overlap 2515204 ACAGCAAGATAAAAA CCTTCT TTT AGAAGA AATAATTTAGGTAAA TERM 2709 2515465 - 2515449 - g 77 -6.5 -4.55446 | GAAGAAAGACGAAAA GGTTGCC TTA GTCAACC GTATGGGGGTCGATC TERM 2710 2516179 - 2516168 - g 83 -4.4 -5.40072 | TTGGTGTGAAAAAAA CCAT GATG ATGG CACAGCGCCTGTATG topA 2515240 - 2517855 + | DNA topoisomerase I TERM 2711 2517916 - 2517932 + F 100 -9.4 -5.46657 | opp_overlap 2517915 2517916 CTGACCTCGGTAAAG CCAGCC TTCGC GGCTGG TTTTTTATTGGGCTA cysB 2518252 - 2519226 + | transcriptional regulator CysB YPTB2142 2519562 - 2520419 + | hypothetical protein TERM 2712 2520855 - 2520873 + G 79 -11.7 -3.11768 | opp_overlap 2520853 TATGACTACTACAGC CTGCCGC AATTG GCGGCAG TGTTGGGTGATATCA acnA 2520783 - 2523455 + | aconitate hydratase TERM 2713 2523561 - 2523587 + T 91 -10.2 -4.16033 | opp_overlap 2523561 TTATCAGCCTCTAAA GGGTAGGTATAA TTA TTGAACCTACCC TTATTCTTATTTCGC ribA 2524209 - 2523619 - | GTP cyclohydrolase II TERM 2714 2523732 - 2523748 + g 71 -4.3 -4.70626 | overlap 2523744 2523747 TATTGATCCCCGCTT GGGTGAG GAT CTCGACC TTTTTAGGGTTGTTG pgpB 2524715 - 2525476 + | phosphatidylglycerophosphatase B YPTB2146 2525657 - 2525968 + | hypothetical protein TERM 2715 2526600 - 2526590 - g 73 -2.4 -5.08824 | overlap 2526591 GGGTTACTGAAAAAA GCGG CAA CGGC GGATAAACAATGTGC YPTB2147 2525975 - 2527144 + | hypothetical protein TERM 2716 2527232 - 2527211 - T 77 -6.5 -4.63218 | opp_overlap 2527211 2527212, overlap 2527212 TCTTTGCTAATAAAA TCGGGTGAA CGGG TCCACCCGG TTGTTAGCTGTTGTG TERM 2717 2527231 - 2527212 - T 76 -10 -3.3761 | opp_overlap 2527211 2527212, overlap 2527211 CTTTGCTAATAAAAT CGGGTGAA CGGG TCCACCCG GTTGTTAGCTGTTGT YPTB2148 2527568 - 2527266 - | hypothetical protein pyrF 2528035 - 2528772 + | orotidine 5'-phosphate decarboxylase YPTB2150 2528772 - 2529098 + | translation initiation factor Sui1 TERM 2718 2529166 - 2529129 - T 95 -13.8 -2.87132 | gap 1, opp_overlap 2529129 2529134, overlap 2529134 TTTTCCGCGCAGATA TAAAATACGGCGT-TGA TATTG TCAAACGCCGTATTTTA TTTAGAACTTCTAAT TERM 2719 2529129 - 2529166 + T 100 -14.5 -3.62859 | gap 1, opp_overlap 2529129 2529134, overlap 2529134 TTTTCCGCGCAGATA TAAAATACGGCGT-TGAT ATT GTCAAACGCCGTATTTTA TTTAGAACTTCTAAT TERM 2720 2529161 - 2529134 - T 100 -9.3 -4.60797 | gap 1, opp_overlap 2529129 2529134, overlap 2529129 CGCGCAGATATAAAA TACGGCGT-TGA TATTG TCAAACGCCGTA TTTTATTTAGAACTT TERM 2721 2529134 - 2529161 + T 100 -10 -4.88405 | gap 1, opp_overlap 2529134 2529129, overlap 2529129 CGCGCAGATATAAAA TACGGCGT-TGAT ATT GTCAAACGCCGTA TTTTATTTAGAACTT osmB 2529569 - 2529354 - | lipoprotein araD 2530049 - 2530744 + | L-ribulose-5-phosphate 4-epimerase TERM 2722 2530766 - 2530787 + T 70 -5.1 -4.56597 | AACATAAATAATGAG CCCGTGT TCAGTCTT GCACGGG TTTTTCCAGCCAGAG YPTB2153 2531021 - 2530773 - | hypothetical protein mipB 2531355 - 2532020 + | fructose-6-phosphate aldolase TERM 2723 2532106 - 2532076 - T 100 -13.5 -4.18506 | overlap 2532062 2532079 TGAGCGGTAAAAGAA TAACGCCCTATAA AATCA CTATAGGGCGTTA CGGTGTCACTAATTT TERM 2724 2532103 - 2532079 - T 93 -10.8 -4.20868 | overlap 2532062 2532076 GCGGTAAAAGAATAA CGCCCTATAA AATCA CTATAGGGCG TTACGGTGTCACTAA YPTB2155 2532442 - 2532137 - | hypothetical protein cstA 2534501 - 2532435 - | putative carbon starvation protein A TERM 2725 2532691 - 2532701 + g 75 -5.4 -4.74132 | opp_overlap 2532691 GCTTGAGCAAGGAAG CCAA TAC TTGG TTTTTCATGGAATAT TERM 2726 2534797 - 2534832 + r 71 -9.6 -3.03124 | opp_overlap 2534802, overlap 2534802 GCAAACATAACATTA AAAAAGCCGTCGGGGG AATT CCTCCGACGGCTATCA TGTTAAAACATAAGA TERM 2727 2534827 - 2534802 - R 100 -16.1 -5.30189 | opp_overlap 2534797 2534802 CATAACATTAAAAAA GCCGTCGGGGG AATT CCTCCGACGGC TATCATGTTAAAACA TERM 2728 2534802 - 2534827 + r 100 -18.3 -2.9155 | opp_overlap 2534802, overlap 2534797 CATAACATTAAAAAA GCCGTCGGGGG AATT CCTCCGACGGC TATCATGTTAAAACA rnb 2536785 - 2534851 - | exoribonuclease II TERM 2729 2536360 - 2536371 + g 73 -7.2 -4.2828 | opp_overlap 2536360 TAGGTCAGCCTGAAA GGCG CGGT CGCC TTTTAATGGGTGGCG TERM 2730 2536553 - 2536543 - G 73 -3.2 -4.86033 | AAAGCGGGATAAAAA TGGC TCA ACCA ATGTTTCAGGTTCAG TERM 2731 2537519 - 2537490 - g 83 -6.5 -4.95547 | gap 1, opp_overlap 2537493 2537507, overlap 2537493 GTTACAAGAAGAAAA TAATGCC-TACCGT AAA ACGGTATGGCATCT CTTGCCGCTACTGAT TERM 2732 2537516 - 2537493 - g 100 -10.4 -4.55653 | gap 1, opp_overlap 2537493 2537507, overlap 2537490 ACAAGAAGAAAATAA TGCC-TACCGT AAA ACGGTATGGCA TCTCTTGCCGCTACT TERM 2733 2537493 - 2537516 + G 72 -10.4 -3.08073 | gap 1, opp_overlap 2537493 2537490, overlap 2537507 ACAAGAAGAAAATAA TGCC-TACCGT AAA ACGGTATGGCA TCTCTTGCCGCTACT YPTB2158 2537434 - 2538744 + | major facilitator superfamily tartrate transporter TERM 2734 2539304 - 2539286 - g 73 -4.6 -4.66609 | opp_overlap 2539286 2539290 TATGGTACGCAAAAA GCATTAAA CGA TTTATTGC TGTCTGATTACAGCC YPTB2159 2538824 - 2539822 + | hypothetical protein nth 2540630 - 2539989 - | endonuclease III YPTB2161 2541328 - 2540627 - | SoxR-reducing system protein RsxE YPTB2162 2541954 - 2541325 - | electron transport complex protein RnfG rnfD 2543019 - 2541964 - | electron transport complex protein RnfD TERM 2735 2543857 - 2543835 - g 93 -8.4 -5.03314 | overlap 2543837 CGTACCTTTAAAAAA CGGTTTGGCG TGA CACCAAACAG CTTCCGCCAGATGAA YPTB2164 2543547 - 2544440 + | AraC family transcriptional regulator YPTB2165 2546524 - 2544545 - | electron transport complex protein RnfC TERM 2736 2545525 - 2545555 + g 76 -9.8 -3.6682 | opp_overlap 2545520 CCCCCATAATCACCA TTGGCGGGTTTTGA GGC TTGAAACCGGCCAA TTTAAGTAAATACAG TERM 2737 2546149 - 2546161 + g 71 -9.1 -3.61398 | CGCGCTGGCGATAGT CAGCC CAC GGCTG TTGTTCACGCCAGCG YPTB2166 2547140 - 2546517 - | electron transport complex protein RnfB TERM 2738 2546902 - 2546921 + g 90 -9.2 -4.54301 | AGTTTCAGCATCACC TGCTCGCC ACCC GGCGCGCA TTTGTTGATTTTTTC YPTB2167 2547721 - 2547140 - | Na(+)-translocating NADH-quinone reductase subunit E TERM 2739 2547774 - 2547749 - R 87 -5.4 -5.55855 | CCTAAAAAAATAAAA GCCGCCTATT ATCCAA AATTGACGGC CCGACGACAACAGAT YPTB2168 2548292 - 2547849 - | hypothetical protein TERM 2740 2547919 - 2547908 - G 80 -4.4 -5.1963 | overlap 2547910 TGTAAGGAACAAAAA TAGC TGCA GCTA GCAGCGGCCACCCGA TERM 2741 2547924 - 2547910 - G 73 -7.1 -4.21997 | overlap 2547908 TAAGGAACAAAAATA GCTGC AGCTA GCAGC GGCCACCCGAGTGTT TERM 2742 2549547 - 2549531 - g 72 -10.9 -2.59793 | overlap 2549530 2549528 TGAGTTAGATAATAT CCGTGAT TTC ATCACGG GTTCGGCCCTGACAT YPTB2169 2548767 - 2550914 + | toxin ABC transporter ATP-binding/permease YPTB2170 2550979 - 2552349 + | RTX toxin ABC transporter YPTB2171 2552351 - 2554489 + | toxin ABC transporter ATP-binding/permease TERM 2743 2554667 - 2554683 + T 70 -5.1 -4.49311 | opp_overlap 2554629 2554625, overlap 2554631 2554668 CAGGCCTCTGAGGGT GTCGCTA TCA TAGCGAA TTTTATAATACTGAT araA 2556233 - 2554731 - | L-arabinose isomerase araB 2558020 - 2556317 - | ribulokinase araF 2558427 - 2559410 + | ABC transporter, periplasmic L-arabinose-binding protein araF araG 2559508 - 2561079 + | L-arabinose transporter ATP-binding protein araH 2561097 - 2562146 + | L-arabinose transporter permease protein araC 2562367 - 2563299 + | DNA-binding transcriptional regulator AraC TERM 2744 2564466 - 2564450 - g 79 -2.2 -5.49569 | GATCAACAGAAAAAA GCACTG CCGAT CATTGC TAAAAATTGATGTTT YPTB2178 2563427 - 2564476 + | putative oxidoreductase TERM 2745 2564521 - 2564548 + F 100 -7.8 -6.32976 | gap 1, opp_overlap 2564519 2564534 AGGGTGGAAATATCT CTCTGGG-CAC AATCTCC GTGGCCCAGAG TTTTTTTATTTTTTT TERM 2746 2565281 - 2565261 - g 89 -6.1 -5.27923 | opp_overlap 2565261, overlap 2565263 GAACGGCACAAAAAA CTGGTCAAT ATC ACTGACCGG TCATCTATTTTGTTG YPTB2179 2564670 - 2565698 + | hypothetical protein TERM 2747 2565835 - 2565807 - T 73 -5.9 -4.48449 | opp_overlap 2565807 TGATGAAAATAGAAA GCGCCGGTACC ACTCTAG GGTATGGGCGC TTTTTTATTTTATCG TERM 2748 2565807 - 2565835 + T 100 -8.1 -5.86976 | opp_overlap 2565807 TGATGAAAATAGAAA GCGCCGGTACC ACTCTAG GGTATGGGCGC TTTTTTATTTTATCG add 2566877 - 2565873 - | adenosine deaminase TERM 2749 2565899 - 2565909 + g 83 -6.8 -4.91084 | GGAATACTTTATCCC GCAG TGC CTGC TTTTCTTGTTCGCTG YPTB2181 2567266 - 2568522 + | hypothetical protein YPTB2182 2569624 - 2568695 - | hypothetical protein YPTB2183 2569923 - 2570747 + | putative transcriptional regulator TERM 2750 2570986 - 2570969 - T 100 -12.7 -4.72272 | opp_overlap 2570969 GGTTCGCATTAAAAA CGGAGCC AATG GGCTCCG TTTTTATCAAACAAA TERM 2751 2570969 - 2570986 + T 100 -12.7 -4.82901 | opp_overlap 2570969 GGTTCGCATTAAAAA CGGAGCC AATG GGCTCCG TTTTTATCAAACAAA YPTB2184 2572559 - 2571015 - | hypothetical protein TERM 2752 2571373 - 2571383 + g 78 -5.4 -5.00616 | ATTGGAATGCTCAGG TTGG CGT CCAA TTTTTTCACCGCGGG TERM 2753 2571392 - 2571410 + g 74 -3 -5.16206 | CGTCCAATTTTTTCA CCGCGGGT GCT ATCAGTGG TTTTTCTGTTGATTT TERM 2754 2571458 - 2571476 + g 71 -7.4 -4.13748 | TCAGTTCGATATTCA GGGTAAAG GTA CTTTCCCC TTTAGTATTTTTCCA TERM 2755 2572298 - 2572284 - G 71 -6.4 -4.19336 | AATGACTTCAATAAA GGCGAT TTC ATCACC ATCGCTCAATACTTT TERM 2756 2572672 - 2572659 - R 71 -3.1 -5.07107 | GAAATCCCCAAAAAA GAAGA TATA TCTCC CAAATAATATAGGCC manA 2573974 - 2572799 - | mannose-6-phosphate isomerase TERM 2757 2573617 - 2573636 + g 71 -2.8 -4.86731 | gap 1, overlap 2573620 TGCGCTCAGCCGCAT CCA-GTGGG ATA CCTGCCTGG TTTTCTTTAGCAAAA fumC 2574258 - 2575655 + | fumarate hydratase TERM 2758 2575678 - 2575698 + T 79 -6.8 -4.62783 | opp_overlap 2575678 ACATTGTTATATTAA CGCCGG GGTGGATTA CCGGCG TTTTTACAGTGGCTA tus 2576670 - 2575735 - | DNA replication terminus site-binding protein TERM 2759 2576080 - 2576093 + g 79 -3.7 -5.29782 | TGGAGGAACAGCTCG GCCAG CATT CAGGC TTTTTTCTAGCTGTA YPTB2188 2578173 - 2576875 - | putative MFS multidrug efflux pump ynfL 2578402 - 2579316 + | hypothetical protein TERM 2760 2579355 - 2579342 - f 87 -5.3 -5.47846 | overlap 2579349 AAGGAAAAAAGAAAA CACAT GATT ATGTG CAGCAAATCACATAA mlc 2579495 - 2580712 + | ROK family transcriptional regulatory protein TERM 2761 2580747 - 2580723 - f 75 -10.3 -2.84602 | opp_overlap 2580727 2580730, overlap 2580722 2580730 GCTAGTGTATTAAAT CTAATAATTAA GAG TTAATTATTAG TGGGTACCTTCGGTC bioD 2580936 - 2581604 + | putative dethiobiotin synthetase YPTB2192 2582953 - 2581709 - | putative voltage-gated ClC-type chloride channel ClcB TERM 2762 2581846 - 2581830 - G 70 -7.9 -3.91197 | overlap 2581822 TCACAAACCATTAAA GCGGCCA TAA TGGGCGC ATGGGTCGTTGCTGC TERM 2763 2582258 - 2582244 - G 77 -4.9 -4.85782 | GCTTTTAAAAATAAA GGGCC GCTGA AGCCC GCCATTAATCCTAGA TERM 2764 2583114 - 2583094 - R 100 -9.7 -4.66537 | TTGTTCAATATAAAA GGCGTACCA CGA TGCTACGCC TTAGCAGGGAGGGAA YPTB2193 2583380 - 2583135 - | hypothetical protein TERM 2765 2583263 - 2583253 - G 77 -8.2 -4.13945 | ATTTCCAGCTTAAAA CCGG ATT CCGG CACGCCATTGCTAAT YPTB2194 2583968 - 2583594 - | hypothetical protein ydfG 2584944 - 2584195 - | 3-hydroxy acid dehydrogenase YPTB2196 2586860 - 2585058 - | putative transcriptional regulator TERM 2766 2586646 - 2586690 + g 100 -20.3 -2.78816 | opp_overlap 2586689, overlap 2586630 2586636 2586650 ACCGATTGCTTATCG GCAATTTTCTCAGCCAGCGCT TTC ACTGTTGGCTGAGAAAATTGC TGTAATACGGCGTGA TERM 2767 2586650 - 2586686 + g 93 -13.9 -3.29471 | overlap 2586646 ATTGCTTATCGGCAA TTTTCTCAGCCAGCGCT TTC ACTGTTGGCTGAGAAAA TTGCTGTAATACGGC TERM 2768 2586891 - 2586913 + H 82 -7.9 -4.43012 | TTCGCTACACATGTA TCATTATTG TGTCT CAATAATGA TTTTAATGTTGCGAT YPTB2197 2587156 - 2588676 + | aldehyde dehydrogenase TERM 2769 2588797 - 2588776 - T 75 -8.7 -3.58037 | opp_overlap 2588776 GAGTAACGTTTCAAA GACCGGTTA TTAG TGACCGGTC TTTTAAGGGGTCTGA TERM 2770 2588776 - 2588797 + T 93 -10.9 -4.10657 | opp_overlap 2588776 GAGTAACGTTTCAAA GACCGGTTA TTAG TGACCGGTC TTTTAAGGGGTCTGA YPTB2198 2590555 - 2588957 - | hypothetical protein TERM 2771 2589579 - 2589602 + g 73 -5.2 -4.56914 | overlap 2589567 2589581 2589585 TCGGCGATCGGCGCA CCTGAACGCG CTAT CGCGTTAATG TTTTGGTTTCGGTCG TERM 2772 2591606 - 2591596 - g 80 -6.8 -4.72029 | opp_overlap 2591591 CGCAATGCAAGAAAA GGTG CTG CACC GTCTCTGTTATCACA YPTB2199 2591079 - 2592002 + | DMT superfamily metabolite efflux pump YPTB2200 2593986 - 2592808 - | putative aminotransferase YPTB2203 2595950 - 2595480 - | hypothetical protein YPTB2204 2597044 - 2596094 - | putative ABC transporter, periplasmic ribose/sugar-binding protein YPTB2205 2598324 - 2597263 - | ABC sugar/ribose transporter, permease subunit TERM 2773 2597779 - 2597796 + g 78 -7.7 -4.35604 | gap 1 ACCGGTATTACCTAG CTCG-GGG CTA CCCGCGAG TTTGTTGTAGGTTAA TERM 2774 2598035 - 2598020 - G 73 -2.4 -5.14563 | CCTTGCATTAAAAAA CCCGCG AATA CGCCAG ACAGACCCAATGTCG YPTB2206 2599889 - 2598351 - | sugar ABC transporter ATPase YPTB2207 2600539 - 2599886 - | hypothetical protein TERM 2775 2600978 - 2600994 + H 79 -8.1 -4.33105 | opp_overlap 2600968 AGGAAGTGTGATTTT CATACAT AAT ATGTATG TTTTGATGCTAATTA TERM 2776 2601563 - 2601538 - g 72 -10.5 -3.01708 | gap 1, opp_overlap 2601537 2601538 CAAAGGGGATAGATA TTGCTCCCGCAA TCG TCGCGGG-GCAA ATTGATATAGCGGCC TERM 2777 2602029 - 2602008 - g 73 -8.7 -3.93583 | GAAGCCATGTATAAA GAGAAGCCA GAGG TGGCTGCTC GCGTACTTAAACTGT YPTB2208 2601294 - 2602325 + | taurine/sulfonate ABC transporter perplasmic-binding protein TERM 2778 2602734 - 2602754 + G 88 -2.3 -5.86965 | overlap 2602735 GCGATGCTGTGGTTC GGCCTGGGG AAT CCGCCGGCA TTTTTTTTGATAAGT YPTB2209 2602329 - 2603150 + | putative ABC taurine/sulfonate transporter, permease subunit TERM 2779 2603285 - 2603297 + G 71 -6.3 -4.29493 | AATAAATCTTCATAT TTCAC ATG GTGAA TTTGTCTGTTTACTG tauB 2603160 - 2603978 + | putative ABC taurine/sulfonates transporter, ATP-binding subunit TERM 2780 2604351 - 2604384 + T 100 -10.3 -4.74453 | gap 1, opp_overlap 2604352 2604354, overlap 2604354 AGCTCTCTCAATTCA ATACGCAGGCGG-TGA TCA TCATCCGCCTGCGTTG TTTTTCAATCTATTC TERM 2781 2604383 - 2604352 - T 100 -13.8 -3.17075 | gap 1, opp_overlap 2604351 2604354, overlap 2604354 GCTCTCTCAATTCAA TACGCAGGCGG-TGA TCA TCATCCGCCTGCGTT GTTTTTCAATCTATT TERM 2782 2604381 - 2604354 - T 100 -16.4 -3.14878 | gap 1, opp_overlap 2604351 2604354, overlap 2604352 TCTCTCAATTCAATA CGCAGGCGG-TGA TCA TCATCCGCCTGCG TTGTTTTTCAATCTA TERM 2783 2604354 - 2604381 + T 100 -16.4 -4.46215 | gap 1, opp_overlap 2604354 2604352, overlap 2604351 TCTCTCAATTCAATA CGCAGGCGG-TGA TCA TCATCCGCCTGCG TTGTTTTTCAATCTA amn 2605893 - 2604403 - | AMP nucleosidase TERM 2784 2605060 - 2605086 + g 71 -3 -5.00616 | overlap 2605062 CTGCCCATTTTTGGC TATCAGGTGATA GGC TGGCATCTGATG TTTTTTCCACGCCAG TERM 2785 2605409 - 2605427 + g 91 -11.8 -4.09243 | ATCGTTTCAATTCCG TCGGTGAT GCC ATCACCGA TTTTAGCCAGATCTG TERM 2786 2606437 - 2606417 - g 71 -3.9 -4.77925 | overlap 2606418 AAAAAATCGGAAAAA GCCGCACAA CAG TTGTTCGGG GCATTACTCGCGAAA TERM 2787 2606678 - 2606664 - g 73 -5.6 -4.62904 | opp_overlap 2606671 AAATACGGGCAAAAA CGGTTG TCA CACCCG CAGCGGTTGAGTTAT YPTB2212 2606099 - 2607547 + | putative virulence factor TERM 2788 2607610 - 2607622 + G 81 -7.7 -4.54727 | overlap 2607597 TTCAGGATAGTGGGA TCCAG TTC CTGGA TTTTGCTTTAACGCC TERM 2789 2607742 - 2607762 + G 78 -11.1 -3.30243 | AATATTCACTGATGC TCCCAGGGG CAG CCCCTGAGA TTGTGAAACCTGAAT TERM 2790 2608760 - 2608770 + G 73 -2.4 -5.00884 | TTTACCGGCTGAAGA ACGG CTA CCGG TTTTTTCCCCCCACT YPTB2213 2607552 - 2610605 + | putative virulence factor TERM 2791 2611105 - 2611131 + G 76 -9.4 -3.82604 | CGCCCGTGCTTTCTT GCTGGATTGCCC TCA GGAAAATCCAGC TTATTCGTTGGATGA TERM 2792 2611285 - 2611268 - g 71 -8.4 -3.62616 | CACCACGACACACAA CGCCAG AAAGAA CTGGCG ACTCACTTCTGGCCT YPTB2214 2610602 - 2613142 + | putative virulence factor TERM 2793 2613214 - 2613188 - T 91 -7.9 -4.84017 | opp_overlap 2613188 AACGTGCCACAAAAA TGCGCAACTCC CCGAC GGAGAAGCGCA TTTTTTAAACAGCAG TERM 2794 2613188 - 2613214 + T 95 -7.9 -5.00616 | opp_overlap 2613188 AACGTGCCACAAAAA TGCGCAACTCC CCGAC GGAGAAGCGCA TTTTTTAAACAGCAG YPTB2215 2614105 - 2613311 - | putative lipoprotein TERM 2795 2614363 - 2614337 - H 72 -7.2 -3.9749 | gap 1, overlap 2614338 AGGCAGAAGAGTAAA GCGTCCGCGCC AGGGAG GGCGCGG-CTC GAGCCCCCAGGGAAG TERM 2796 2614437 - 2614449 + H 91 -7.7 -4.78237 | opp_overlap 2614437 GCACTTTGTCAATAA CCTCA ACG TGAGG TTTTGTTATCACCTA TERM 2797 2614449 - 2614437 - H 70 -7.7 -3.62046 | opp_overlap 2614437 GCACTTTGTCAATAA CCTCA ACG TGAGG TTTTGTTATCACCTA TERM 2798 2614835 - 2614811 - H 100 -15 -3.6292 | gap 1, opp_overlap 2614811 AGAAAGATTCCCAAA CCCCGC-CGGC GCCA GCCGAGCGGGG TTTCTTTTTATCGCC TERM 2799 2614811 - 2614835 + H 100 -15 -4.96501 | gap 1, opp_overlap 2614811 AGAAAGATTCCCAAA CCCCGC-CGGC GCCA GCCGAGCGGGG TTTCTTTTTATCGCC TERM 2800 2615761 - 2615745 - g 79 -10.9 -3.59979 | TCGGGCCATCGGAAA GGCAGAA CAA TTCTGCC CTCATGCCAATATTA ilvB 2614891 - 2616558 + | acetolactate synthase catalytic subunit ilvN 2616560 - 2616907 + | acetolactate synthase 1 regulatory subunit TERM 2801 2616915 - 2616957 + T 100 -15 -3.65046 | opp_overlap 2616904 2616903 2616925, overlap 2616916 AAAGGTGACGTTGTC ACACGTTAAACCCTGTCG TTACTGC CGACAGGGTTTAACGGGC TTATTCGAGTAGGGA TERM 2802 2616916 - 2616956 + T 100 -18.5 -2.78813 | opp_overlap 2616903 2616925, overlap 2616915 AAGGTGACGTTGTCA CACGTTAAACCCTGTCG TTACTGC CGACAGGGTTTAACGGG CTTATTCGAGTAGGG TERM 2803 2616947 - 2616925 - T 82 -10.6 -3.63627 | opp_overlap 2616916 2616915 TTGTCACACGTTAAA CCCTGTCG TTACTGC CGACAGGG TTTAACGGGCTTATT YPTB2218 2617648 - 2616974 - | nucleotidase YPTB2219 2620175 - 2617779 - | hypothetical protein TERM 2804 2620293 - 2620277 - R 71 -8.7 -3.39908 | CTTTTTTAAAACAGA CTGCCGT AAC ACAGCAG AAAAACCCATTAATT TERM 2805 2620330 - 2620299 - R 100 -8.8 -4.97666 | opp_overlap 2620299 AACACAGCAGAAAAA CCCATTAATTTCAC TTAA GTGCAGTTAATGGG TTAAATAATAAGTCA TERM 2806 2620299 - 2620330 + r 79 -11 -3.10164 | opp_overlap 2620299 AACACAGCAGAAAAA CCCATTAATTTCAC TTAA GTGCAGTTAATGGG TTAAATAATAAGTCA TERM 2807 2620508 - 2620518 + r 78 -5.4 -4.96848 | opp_overlap 2620501 TGAAATGATGCAGTC TGCA GGA TGCA TTTTTCTATACCCAA TERM 2808 2620696 - 2620674 - R 100 -9.9 -4.96646 | gap 1 GGACATAAGCAAAAA TCCCGGC-CA TTAC TGCGCCGGGA CGTTCCAGTGAGATA phoA 2622166 - 2620721 - | alkaline phosphatase ogt 2622424 - 2622942 + | putative methylated-DNA--protein-cysteine methyltransferase fnr 2623015 - 2623767 + | fumarate/nitrate reduction transcriptional regulator YPTB2223 2623902 - 2624858 + | universal stress protein UspE TERM 2809 2624919 - 2624896 - T 100 -13.2 -4.28049 | CGTAAAATCCTAAAA TAAGGGCCAC CGAA GTGGCCCTCA GACTGCTGACAAACC TERM 2810 2625005 - 2624979 - T 84 -10.1 -3.82218 | gap 1, opp_overlap 2624988, overlap 2624980 2624995 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 2811 2625006 - 2624980 - T 72 -10.1 -2.88849 | gap 1, opp_overlap 2624988, overlap 2624979 2624995 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT TERM 2812 2625106 - 2625079 - T 100 -15.6 -3.62046 | overlap 2625080 GCACTTTGTCAATAA CCTCAGGGCCAC CGAA GTGGCCCTGAGC AATACAATGGATGTT TERM 2813 2625105 - 2625080 - T 100 -19.1 -2.77013 | overlap 2625079 CACTTTGTCAATAAC CTCAGGGCCAC CGAA GTGGCCCTGAG CAATACAATGGATGT pntB 2626528 - 2625134 - | pyridine nucleotide transhydrogenase pntA 2628127 - 2626601 - | NAD(P) transhydrogenase subunit alpha TERM 2814 2627074 - 2627099 + g 79 -3.2 -5.19879 | CGCGAATCACGGTAT CGTCGAAATC AATATC GATCTCGCCG TTTTTCTCTTTGCAA YPTB2226 2628451 - 2628248 - | hypothetical protein YPTB2227 2628657 - 2629610 + | hypothetical protein TERM 2815 2629617 - 2629641 + F 82 -7.8 -4.4727 | overlap 2629620 TTCAAATAATTATCT TAAGGGCGGC CAAGT GCTGCCCTTC TTTTATCCGTGTTGC TERM 2816 2629620 - 2629638 + F 88 -9.5 -4.33785 | overlap 2629617 AAATAATTATCTTAA GGGCGGC CAAGT GCTGCCC TTCTTTTATCCGTGT TERM 2817 2630418 - 2630436 + G 79 -10.4 -3.68619 | GCATCGCATTTAGCC TCGATACT TTT AGTATCGA TTTCACTGGCTTAGC YPTB2228 2629880 - 2631271 + | APC family arginine/ornithine antiporter YPTB2229 2631711 - 2631295 - | hypothetical protein TERM 2818 2631520 - 2631542 + g 88 -12 -3.646 | opp_overlap 2631507, overlap 2631521 TACTTGCAGCGCCAA TGCCGTAAGC TGA GCTTGCGGCG TTCTCTCTAATTCAG TERM 2819 2631521 - 2631541 + g 85 -13.3 -2.78278 | opp_overlap 2631507, overlap 2631520 ACTTGCAGCGCCAAT GCCGTAAGC TGA GCTTGCGGC GTTCTCTCTAATTCA rstA 2632008 - 2632754 + | DNA-binding transcriptional regulator RstA rstB 2632754 - 2634058 + | sensor protein RstB YPTB2232 2634136 - 2635635 + | putative carboxypeptidase TERM 2820 2636976 - 2636964 - g 80 -4.7 -5.03314 | CTGACGCGGAAAAAA GCCTG AAC CTGGC CGGCGCGTGCGTCAG TERM 2821 2638116 - 2638103 - g 80 -3.8 -5.1861 | CTGAGGAGTAAAAAA TCCG GCGATA CGGA AACGGAAGGCCTGCA TERM 2822 2638390 - 2638365 - g 72 -6.1 -4.47328 | AAGCGGATTACAAAA CCGTCCGCTAC TCTG GTAAGGAACGG GATGCGACGGGGTTG TERM 2823 2638505 - 2638522 + G 71 -6.3 -4.27441 | CTGTTCAGGATGGCG CGCAATA ATCC TGTTGCG TTTATTGATCGTAAT YPTB2233 2636474 - 2639458 + | putative insecticidal toxin complex TERM 2824 2639441 - 2639451 + T 75 -5.4 -4.78752 | ACTCCAGAGCATAGT CCAA TTT TTGG TTTTTAAGTTGTAGT TERM 2825 2639517 - 2639486 - T 86 -10.4 -3.79043 | opp_overlap 2639490, overlap 2639505 CATTACTAACCGAAA GATAGTTATATTCA GAAA TGGATATAACTATC CTAAAAAATTCACAC TERM 2826 2639992 - 2639979 - T 74 -8.1 -3.95435 | GGGGTTAAAATATAA GTGGC GTAA GCCAC CGGAGCGCCCCGAGG TERM 2827 2640075 - 2640062 - T 70 -8.1 -3.72051 | opp_overlap 2640062, overlap 2640072 TTCAATAACCTCAAA GGAGC CAAA GCTCC TTTTTATAAGGTGAC TERM 2828 2640062 - 2640075 + T 91 -8.1 -4.85599 | opp_overlap 2640062 2640072 TTCAATAACCTCAAA GGAGC CAAA GCTCC TTTTTATAAGGTGAC YPTB2234 2640678 - 2640100 - | hypothetical protein YPTB2235 2641258 - 2640704 - | hypothetical protein YPTB2236 2641653 - 2641865 + | hypothetical protein YPTB2237 2641862 - 2642158 + | acid shock protein TERM 2829 2642243 - 2642226 - f 93 -12.7 -3.09208 | opp_overlap 2642226, overlap 2642228 AAATGATTCACTCAA CACCCGG TTCT CCGGGTG TTTTTTATCAGGAGT TERM 2830 2642226 - 2642243 + F 100 -12.7 -5.24531 | opp_overlap 2642226 2642228 AAATGATTCACTCAA CACCCGG TTCT CCGGGTG TTTTTTATCAGGAGT TERM 2831 2642241 - 2642228 - f 72 -9.5 -3.10056 | opp_overlap 2642226, overlap 2642226 ATGATTCACTCAACA CCCGG TTCT CCGGG TGTTTTTTATCAGGA YPTB2238 2642492 - 2643334 + | putative pepetidase YPTB2239 2643713 - 2643390 - | putative DNA-binding phage-related protein YPTB2240 2644081 - 2643710 - | hypothetical protein TERM 2832 2644368 - 2644328 - R 100 -8.4 -5.48514 | gap 1, overlap 2644331 ACTAAGAAATAAAAA GAATTCGACGCCTAAGTCT AGAT AG-CTCAGGCGTCGAATAG GGGCATCAATCAGAC TERM 2833 2644365 - 2644331 - R 100 -14.5 -4.78345 | gap 1, overlap 2644328 AAGAAATAAAAAGAA TTCGACGCCTAAGTCT AGAT AG-CTCAGGCGTCGAA TAGGGGCATCAATCA hrpA 2648220 - 2644378 - | ATP-dependent RNA helicase HrpA TERM 2834 2645921 - 2645934 + g 75 -8.1 -4.19624 | opp_overlap 2645921 2645919 TCATCGACCAGAATA TCCCG CCGA CGGGA TTTGTGTTCCAACTC TERM 2835 2645999 - 2645989 - G 71 -8.2 -3.63694 | ATTCATTCGGAAGAA CGCG TGC CGCG TCTGCCAGTCACCTT TERM 2836 2648626 - 2648607 - H 72 -6.4 -4.3351 | overlap 2648609 ATAAAATCGAACAAA GAGCGCAA AATA TTGCGCTA TCACTGGTAGCAAAA TERM 2837 2648624 - 2648609 - H 78 -9 -3.75005 | overlap 2648607 AAAATCGAACAAAGA GCGCAA AATA TTGCGC TATCACTGGTAGCAA acpD 2648710 - 2649315 + | azoreductase TERM 2838 2649414 - 2649431 + T 100 -14.1 -5.35222 | AGCCATGTGATGATT GCGCGCC AACC GGCGCGC TTTTTTATGCCTTTT YPTB2243 2650392 - 2649436 - | putative transcriptional regulatory protein TERM 2839 2650541 - 2650530 - H 70 -7.2 -3.86283 | TTAACCTACACGAAA GGGC AAAT GCCC AAATATTGAATTTAT TERM 2840 2651307 - 2651284 - g 71 -3.1 -5.00616 | gap 1, overlap 2651285 GGGTGTTGGAAAAAA CCGGGATCGT AGATA ACGCTCC-GG TGATGGGGGAATCAT dalD 2650602 - 2651993 + | putative mannitol dehydrogenase YPTB2245 2652546 - 2652175 - | hypothetical protein YPTB2246 2652750 - 2652556 - | putative lipoprotein YPTB2247 2655443 - 2652747 - | hypothetical protein TERM 2841 2653081 - 2653067 - G 79 -11.4 -3.13908 | opp_overlap 2653064 AACGCAACCAGTCAA TCGCCG CAC CGGCGA CAGTATTGCTCTCAC ldhA 2655709 - 2656701 + | D-lactate dehydrogenase hslJ 2656771 - 2657223 + | heat-inducible protein YPTB2250 2657694 - 2657281 - | putative lipoprotein mgtC2 2657907 - 2658566 + | putative Mg(2+) transport ATPase qacE 2658964 - 2658626 - | DMT superfamily multiple drug (quaternary ammonium compounds) efflux pump TERM 2842 2661883 - 2661898 + G 75 -10.4 -3.40403 | opp_overlap 2661881 CGCTGTTCGAATATT CCGGAG CCTG CTCCGG TTGTGGTGAAACACC nifJ 2659437 - 2662970 + | putative pyruvate-flavodoxin oxidoreductase TERM 2843 2663005 - 2663030 + F 100 -13.4 -5.18995 | TGTGCGATTTACTGA GCCAGTTAGC TAAACC GCTAACTGGC TTTTTCTATTATCTT TERM 2844 2663315 - 2663305 - g 83 -8.2 -4.64144 | overlap 2663307 AACAAGCTGCAAAAA CGGC TGC GCCG TAACGTCGGCCAAGC TERM 2845 2664161 - 2664148 - g 73 -2.3 -5.09685 | GAAGACACAGAAAAA CGTCC ATCA GTACG CCTTGATGTGTTGGA YPTB2254 2663245 - 2664186 + | C32 tRNA thiolase YPTB2255 2664457 - 2665461 + | hypothetical protein TERM 2846 2665464 - 2665487 + F 71 -8.8 -3.38991 | opp_overlap 2665465 2665467, overlap 2665462 2665467 TCATAGCCAGTAAAA ATAGTGGGCC AAAT GGCCCACTGA TGTTATTGGCAAAGT TERM 2847 2665486 - 2665465 - f 100 -10.1 -4.76041 | opp_overlap 2665464 2665462 2665467, overlap 2665467 CATAGCCAGTAAAAA TAGTGGGCC AAAT GGCCCACTG ATGTTATTGGCAAAG TERM 2848 2665484 - 2665467 - f 100 -12.7 -3.99327 | opp_overlap 2665467 2665464 2665462, overlap 2665465 TAGCCAGTAAAAATA GTGGGCC AAAT GGCCCAC TGATGTTATTGGCAA TERM 2849 2665467 - 2665484 + F 89 -12.7 -2.85545 | opp_overlap 2665465 2665467, overlap 2665464 2665462 TAGCCAGTAAAAATA GTGGGCC AAAT GGCCCAC TGATGTTATTGGCAA TERM 2850 2665578 - 2665604 + F 80 -8.7 -3.9749 | gap 1, overlap 2665578 CTTCCATGGGGGCTA G-ATCCGCGCCA CTAC TGGCGCGGACGC TTTACTCTTCTGCCT TERM 2851 2665974 - 2665960 - g 91 -7.2 -5.26875 | opp_overlap 2665960 TTTCTAATGAAAAAA TCAAGA GCA TCTTGA TGGATTACTCATCCA YPTB2256 2665773 - 2666612 + | putative regulatory protein TERM 2852 2666788 - 2666765 - T 100 -14 -5.60993 | CGGCGCACAAAAAAA TGCCGATGTT TTTC AACATCGGCA CCGTAACAATTAAAT zntB 2667969 - 2666986 - | zinc transporter TERM 2853 2668181 - 2668151 - R 93 -9 -4.54323 | opp_overlap 2668153, overlap 2668153 2668157 AAGGACAAGAATAAA TGCAAAGGCGGATT TAA AATCCGCCTCTGTT AATTAGTTAAAAACA TERM 2854 2668179 - 2668153 - R 100 -16 -2.57496 | opp_overlap 2668153, overlap 2668151 2668157 GGACAAGAATAAATG CAAAGGCGGATT TAA AATCCGCCTCTG TTAATTAGTTAAAAA TERM 2855 2668153 - 2668179 + r 100 -13.8 -3.45366 | opp_overlap 2668153 2668151 2668157 GGACAAGAATAAATG CAAAGGCGGATT TAA AATCCGCCTCTG TTAATTAGTTAAAAA TERM 2856 2668175 - 2668157 - R 100 -13.2 -3.95772 | opp_overlap 2668153, overlap 2668153 2668151 AAGAATAAATGCAAA GGCGGATT TAA AATCCGCC TCTGTTAATTAGTTA mppA 2669828 - 2668212 - | putative ABC transporter, periplasmic murein peptide-binding protein YPTB2259 2670206 - 2670976 + | murein peptide amidase A YPTB2260 2671992 - 2671018 - | putative mandelate racemase / muconate lactonizing protein TERM 2857 2672027 - 2672043 + H 71 -9.5 -2.98368 | overlap 2672026 ACAGTTTTAGCTTAG GTATGAG ACC CTCATAC GTTTATCCGTTAAGT TERM 2858 2672049 - 2672069 + H 70 -2.5 -5.01732 | overlap 2672050 ACCCTCATACGTTTA TCCGTTAAG TCT TTAAACGGG TTTTTTAGCGAACTT tpx 2672155 - 2672658 + | thiol peroxidase TERM 2859 2672775 - 2672751 - T 88 -10 -4.18494 | gap 1, opp_overlap 2672751 TATCGTGACTCAAAA CGGCTGC-CCC ACTC GGGTACAGCCG TTTTTTATTACTCTT TERM 2860 2672751 - 2672775 + T 100 -7.8 -5.54885 | gap 1, opp_overlap 2672751 TATCGTGACTCAAAA CGGCTG-CCCC ACTC GGGTACAGCCG TTTTTTATTACTCTT tyrR 2674399 - 2672822 - | DNA-binding transcriptional regulator TyrR YPTB2263 2674736 - 2675182 + | hypothetical protein YPTB2264 2675261 - 2675719 + | hypothetical protein YPTB2265 2676790 - 2675729 - | hypothetical protein TERM 2861 2676150 - 2676168 + g 73 -8.8 -3.85817 | opp_overlap 2676144 2676143 ATCATCAACGCTGAT TCAGCAGC ATA GCGGCTGA TTTCTGCCCGAGCCT YPTB2266 2678184 - 2676787 - | hypothetical protein TERM 2862 2677887 - 2677856 - G 73 -7.3 -4.1899 | gap 1, opp_overlap 2677873 TCACTGGAGCGAAAA CGTAACGCCAGACG GATTT CG-CTGACGCCACG GGTCGGCGTTGGCCA pspD 2678407 - 2678165 - | peripheral inner membrane phage-shock protein pspC 2678851 - 2678492 - | DNA-binding transcriptional activator PspC TERM 2863 2678738 - 2678717 - G 74 -3.1 -5.09173 | gap 1, overlap 2678719 GAATAGGCCAAAAAA CAGTGATAAC ACC ATTATCAC-G CGAACCAACCGTACT TERM 2864 2678737 - 2678719 - G 71 -6.8 -4.16351 | overlap 2678717 ATAGGCCAAAAAACA GTGATAAC ACC ATTATCAC GCGAACCAACCGTAC TERM 2865 2678804 - 2678824 + g 82 -5.3 -5.1675 | overlap 2678812 CCCTTTGATCATGCC CTCTTCCGG TAC CCGGTACAG TTTTTTACTGCCTAA pspB 2679078 - 2678851 - | phage shock protein B pspA 2679905 - 2679240 - | phage shock protein PspA pspF 2680150 - 2681178 + | phage shock protein operon transcriptional activator TERM 2866 2681258 - 2681241 - f 100 -8.4 -5.81032 | GAAGGGTAAAAAAAA GCCAGC ACCCGA GCTGGC TTAAAATACTGGAAG TERM 2867 2681371 - 2681357 - f 70 -5.8 -4.28361 | TGAATCGCATCAAAA TGATAA TAC TTATCA ATATCAATTGTAAAT sapA 2681777 - 2683420 + | ABC transporter, periplasmic peptide binding protein sapA TERM 2868 2683889 - 2683879 - g 74 -6.8 -4.45544 | CTTTATCAAGTAAAA CCAG TGA CTGG GCTGGCATTGGTCGA sapB 2683417 - 2684382 + | ABC peptide transporter, permease subunit sapB sapC 2684369 - 2685259 + | ABC peptide transporter, permease subunit sapC TERM 2869 2685628 - 2685641 + G 78 -8.1 -4.42238 | opp_overlap 2685626 TGGACATATAAAGGC CGCTG GTGG CAGCG TTTTCATTGGCGTAA sapD 2685259 - 2686251 + | ABC peptide transporter, ATP-binding subunit sapD sapF 2686251 - 2687066 + | ABC peptide transporter, ATP-binding subunit sapF TERM 2870 2687107 - 2687126 + F 100 -12.2 -3.96534 | overlap 2687119 CGGTGGTTAACCTCC CCGCTATC TTTT GATAGCGG TTATCTTCTTTTAAC YPTB2277 2687457 - 2688737 + | hypothetical protein tppB 2689380 - 2690885 + | putative tripeptide transporter permease TERM 2871 2690915 - 2690896 - f 81 -9.2 -3.77607 | opp_overlap 2690897, overlap 2690897 AATAAGCTGACTAAA CGCGCTCC TGCG GGAGCGCT TTTAGTGCTAGTTAG TERM 2872 2690914 - 2690897 - f 89 -12.7 -2.85841 | opp_overlap 2690897, overlap 2690896 ATAAGCTGACTAAAC GCGCTCC TGCG GGAGCGC TTTTAGTGCTAGTTA TERM 2873 2690897 - 2690914 + F 100 -12.7 -4.33105 | opp_overlap 2690896 2690897 ATAAGCTGACTAAAC GCGCTCC TGCG GGAGCGC TTTTAGTGCTAGTTA YPTB2279 2691141 - 2691731 + | hypothetical protein TERM 2874 2691865 - 2691877 + F 74 -4.8 -4.84492 | TCCATCAGCATTGGA GCCT CTAAC AGGC TTTTATTGTCATTAA YPTB2280 2691977 - 2692240 + | hypothetical protein TERM 2875 2692375 - 2692346 - f 72 -9.3 -3.16553 | opp_overlap 2692339, overlap 2692344 ACAACTATCAATACA CTACAGCGGGG GAAATCAT CACCGCTGTAG GACTTGTATTGCCCC gst 2692485 - 2693090 + | glutathionine S-transferase TERM 2876 2693138 - 2693108 - T 100 -15.6 -3.51694 | opp_overlap 2693105, overlap 2693104 AATAATGAGAATCAA TCAATTGCCCCC ATCACTA GGGGGCAATTGA AAATGGTTAGATTAC pdxY 2694010 - 2693150 - | pyridoxamine kinase TERM 2877 2694151 - 2694130 - R 87 -5.1 -5.52384 | opp_overlap 2694133, overlap 2694133 GTCTCAGCAAAAAAA TAAGGGACA TTTC TGCCCCTTC TCTTATTTTACGCTT TERM 2878 2694148 - 2694133 - R 82 -6.8 -4.8487 | opp_overlap 2694133, overlap 2694130 TCAGCAAAAAAATAA GGGACA TTTC TGCCCC TTCTCTTATTTTACG tyrS 2695439 - 2694165 - | tyrosyl-tRNA synthetase TERM 2879 2694549 - 2694564 + g 76 -2.5 -5.21506 | overlap 2694544 AACATATTGCGCGCG CGGTG CTTTAC CACTG TTTTTATCTTCTTCT TERM 2880 2694720 - 2694734 + g 71 -8.6 -3.74693 | CCAGACTGCACCCCC TTCGGT TTT ACCGAA TTTAGTGCCATCGGC pdxH 2696274 - 2695621 - | pyridoxamine 5'-phosphate oxidase YPTB2285 2696679 - 2696365 - | putative lipoprotein anmK 2697849 - 2696737 - | anhydro-N-acetylmuramic acid kinase slyB 2698405 - 2698872 + | putative lipoprotein TERM 2881 2698924 - 2698954 + T 100 -14.1 -5.34555 | opp_overlap 2698928, overlap 2698928 TAAATCAGAACAGTA AAAACCGGGGTTC ATTGC GAACCCCGGTTTG TTTTTTGTACTGTGG TERM 2882 2698928 - 2698950 + T 100 -14.9 -5.1471 | opp_overlap 2698928, overlap 2698924 TCAGAACAGTAAAAA CCGGGGTTC ATTGC GAACCCCGG TTTGTTTTTTGTACT TERM 2883 2698950 - 2698928 - T 100 -15.6 -4.90906 | opp_overlap 2698928 2698924 TCAGAACAGTAAAAA CCGGGGTTCA TTG CGAACCCCGG TTTGTTTTTTGTACT rovA 2699447 - 2699016 - | transcriptional regulator SlyA TERM 2884 2699609 - 2699589 - R 81 -5.5 -5.24531 | opp_overlap 2699592, overlap 2699592 ATTCTTTAGAAAAAA TGATGTATC AAC GATACATTA CCTCTTAAGGATTAA TERM 2885 2700237 - 2700209 - R 100 -8.9 -4.67942 | CCGAAGAAAGTAAAA CTACGCCAGTC TGAGCGC GATTGGCGTAG AGAAAGATTAAGGGA YPTB2289 2701141 - 2700245 - | putative aldo/keto reductase YPTB2290 2701638 - 2701273 - | hypothetical protein TERM 2886 2701472 - 2701441 - G 100 -14.6 -4.51097 | gap 1, overlap 2701430 GCAACCACGACAAAA GCCACGGTCATCTGT TTG ACAGAT-ACCGCGGC AGGGGCTGGGAATAT TERM 2887 2701508 - 2701495 - G 77 -3.1 -5.27779 | overlap 2701500 GGGAATATCAAAAAA CTCAA GTTG CTGAG CCACGCTGCCTCCTA TERM 2888 2701811 - 2701822 + G 83 -4.4 -5.40072 | opp_overlap 2701811 GATCCGATTCGACAA TAGC GACA GCTA TTTTTTTGCAGCAAC YPTB2291 2701686 - 2703323 + | putative cell division protein TERM 2889 2703503 - 2703522 + F 100 -5.7 -5.80364 | AGACCATAGCCTTGA TGCCAGC GCCTTG GTTGGCA TTTTTTTCTTGACCT YPTB2292 2703566 - 2704165 + | TetR family transcriptional regulator YPTB2293 2704253 - 2705350 + | N-ethylmaleimide reductase sepC 2708519 - 2705571 - | insecticial toxin TERM 2890 2709105 - 2709123 + G 71 -4.6 -4.64676 | CTGGCCCGGTAAAAG GCGGTAAT ACC ATTATTGC TTTTGTTGAAGATCC gloA 2708792 - 2709199 + | lactoylglutathione lyase TERM 2891 2709210 - 2709227 + F 87 -8.4 -4.48987 | opp_overlap 2709209 ACTGATTAACTTAAG GGCACC TCGGAC GGTGCC TTTTACTTATCACAA rnt 2709311 - 2709958 + | ribonuclease T TERM 2892 2709998 - 2709981 - T 100 -8.4 -5.26875 | CTTGTAATTAAAAAA GGTGGC CATTAC GCCACC TGAGGTTATTGACAA TERM 2893 2710076 - 2710102 + T 73 -10.1 -2.92924 | gap 1, opp_overlap 2710065, overlap 2710071 2710077 ACATCCATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCTTTGCC TERM 2894 2710077 - 2710103 + T 84 -10.1 -3.89412 | gap 1, opp_overlap 2710065, overlap 2710071 2710076 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCTTTGCCT TERM 2895 2710166 - 2710183 + T 79 -8.4 -4.15703 | TTGTCAGCAGTCTGA GGTGGC CATTAC GCCACC TTCTTATTTATCACA YPTB2297 2710617 - 2710267 - | hypothetical protein TERM 2896 2710943 - 2710921 - H 88 -7 -5.1287 | opp_overlap 2710921 2710927, overlap 2710924 CTCAGAGTGAAAAAA CAACAATGGC AAC GCCATTAATG TTTTCTCACAATATC TERM 2897 2710940 - 2710924 - H 81 -7.3 -4.65666 | opp_overlap 2710921 2710927, overlap 2710921 AGAGTGAAAAAACAA CAATGGC AAC GCCATTA ATGTTTTCTCACAAT TERM 2898 2711348 - 2711332 - g 71 -2.9 -4.87892 | overlap 2711335 TCGCAATAAAATAAA CAGCAGT CGG ACAACTG AAAGTAAAACTGCAG YPTB2298 2711042 - 2711908 + | hypothetical protein TERM 2899 2712444 - 2712456 + G 75 -10.5 -3.31162 | opp_overlap 2712444, overlap 2712442 2712440 AAGAGATCGTGAAAA CCGCC AAT GGCGG TGTGTTTAATAATGC TERM 2900 2712456 - 2712444 - g 85 -10.5 -4.1413 | opp_overlap 2712442 2712440 2712444 AAGAGATCGTGAAAA CCGCC AAT GGCGG TGTGTTTAATAATGC sodB 2712269 - 2712847 + | superoxide dismutase TERM 2901 2712900 - 2712922 + F 100 -16.4 -3.6849 | opp_overlap 2712900, overlap 2712903 CATCGATAAGATAAA TAAGGGCGGT TTA ACCGCCCTTA TTATTACCGTTCACT TERM 2902 2712922 - 2712900 - f 100 -16.4 -4.28188 | opp_overlap 2712900 2712903 CATCGATAAGATAAA TAAGGGCGGT TTA ACCGCCCTTA TTATTACCGTTCACT TERM 2903 2712903 - 2712919 + F 100 -13.7 -3.97139 | opp_overlap 2712900, overlap 2712900 CGATAAGATAAATAA GGGCGGT TTA ACCGCCC TTATTATTACCGTTC TERM 2904 2713333 - 2713354 + F 75 -8.7 -3.59583 | opp_overlap 2713333 ACGATTAACATGATA CTGACCTGT TTCA ACCGGTCAG TTTAGGAGTCATTCT TERM 2905 2714085 - 2714102 + G 71 -9.1 -3.48395 | opp_overlap 2714085 2714088, overlap 2714087 ATTCTGACACAAAAA CATCGCC CAAC GGCGGTG TTCTGTGGCGGCGAT TERM 2906 2714102 - 2714085 - g 83 -6.9 -4.9725 | opp_overlap 2714085 2714087, overlap 2714088 ATTCTGACACAAAAA CATCGCC CAAC GGCGGTG TTCTGTGGCGGCGAT purR 2713374 - 2714399 + | DNA-binding transcriptional repressor PurR TERM 2907 2714446 - 2714466 + T 84 -9.8 -3.85092 | opp_overlap 2714449, overlap 2714440 2714449 CCGGCCCGATTCGGA TAACCGCA TTCCC TGCGGTTA TTTGCTATCGATGGT TERM 2908 2714449 - 2714463 + T 72 -7.1 -4.05208 | opp_overlap 2714449, overlap 2714440 2714446 GCCCGATTCGGATAA CCGCA TTCCC TGCGG TTATTTGCTATCGAT YPTB2301 2715420 - 2714488 - | putative DNA-binding transcriptional regulator TERM 2909 2714971 - 2714951 - G 73 -4.5 -4.82128 | overlap 2714952 TCACGAAAGACAAAA CGCCCACCC ACT GGGATGGCA CGGGTCGCCCCTATG YPTB2302 2715710 - 2716912 + | inner membrane transport protein YdhC cfa 2717392 - 2718543 + | cyclopropane fatty acyl phospholipid synthase TERM 2910 2718553 - 2718582 + T 86 -5.7 -5.3236 | opp_overlap 2718553 2718556 2718558 2718560, overlap 2718556 CGCTAACCTCAGATA GGAGACAGGGG GATAAAAA CCCCTGTCTTA TTTTTTGTAGGTTAT TERM 2911 2718556 - 2718579 + T 100 -9.6 -4.73105 | opp_overlap 2718553 2718556 2718558 2718560, overlap 2718553 TAACCTCAGATAGGA GACAGGGG GATAAAAA CCCCTGTC TTATTTTTTGTAGGT ribE 2719250 - 2718594 - | riboflavin synthase subunit alpha YPTB2305 2719499 - 2720872 + | multidrug efflux protein TERM 2912 2720961 - 2720951 - f 82 -6.8 -4.87803 | overlap 2720952 TAGTCTCAAATAAAA GGGA GTC TCCC CAACAACATCTGGAT TERM 2913 2723262 - 2723252 - g 73 -3.2 -4.89393 | GAAACCGCAGAAAAA CTGG AAG CCAA AGTGATTGTGGTCGC pykF 2722148 - 2723560 + | pyruvate kinase TERM 2914 2723586 - 2723615 + F 100 -10.8 -5.055 | opp_overlap 2723586 2723591, overlap 2723591 TTATTGTTCAATAAT TAAAACGCCGCT CTCTAT AGCGGCGTTTTC TTTTTTAAAGCTTGC TERM 2915 2723615 - 2723586 - f 77 -10.8 -2.77344 | opp_overlap 2723586 2723591, overlap 2723591 TTATTGTTCAATAAT TAAAACGCCGCT CTCTAT AGCGGCGTTTTC TTTTTTAAAGCTTGC TERM 2916 2723591 - 2723610 + F 100 -10.7 -5.42198 | opp_overlap 2723591 2723586, overlap 2723586 GTTCAATAATTAAAA CGCCGCT CTCTAT AGCGGCG TTTTCTTTTTTAAAG TERM 2917 2723610 - 2723591 - f 100 -10.7 -4.56133 | opp_overlap 2723586 2723591, overlap 2723586 GTTCAATAATTAAAA CGCCGCT CTCTAT AGCGGCG TTTTCTTTTTTAAAG lpp 2723881 - 2724117 + | major outer membrane lipoprotein TERM 2918 2724157 - 2724139 - T 100 -14.6 -4.8622 | opp_overlap 2724139 TTCCTGAATGAAAAA TGGCGCAC ATT GTGCGCCA TTTTTTTGCCCTACG TERM 2919 2724139 - 2724157 + T 100 -14.6 -5.44119 | opp_overlap 2724139 TTCCTGAATGAAAAA TGGCGCAC ATT GTGCGCCA TTTTTTTGCCCTACG TERM 2920 2724471 - 2724427 - T 90 -11.6 -3.66556 | gap 1, opp_overlap 2724419 2724414, overlap 2724428 AAGCGCGGAATACAA TTCTG-GCTTTACCACGATGG ATCT CCACCACGGTAAAGCACAGAC AAGTGATTAGTTATT TERM 2921 2724470 - 2724428 - T 100 -15.1 -2.79452 | gap 1, opp_overlap 2724419 2724414, overlap 2724427 AGCGCGGAATACAAT TCTG-GCTTTACCACGATGG ATCT CCACCACGGTAAAGCACAGA CAAGTGATTAGTTAT YPTB2308 2725542 - 2724478 - | hypothetical protein TERM 2922 2725783 - 2725771 - R 100 -9.1 -4.78149 | opp_overlap 2725770 CTCACAACGCAAAAA TGGGC AGA GCCCA ATAATTAAAGAGCAA YPTB2309 2726235 - 2725813 - | cysteine desufuration protein SufE TERM 2923 2726291 - 2726267 - R 91 -6.4 -5.43553 | opp_overlap 2726267 ACGTAAAAAATAAAA GCCGACTGCT GAAAG AATAGTCGGC TTTGGTGTTGCCTGT YPTB2310 2727544 - 2726324 - | selenocysteine lyase YPTB2311 2728866 - 2727541 - | cysteine desulfurase activator complex subunit SufD TERM 2924 2728593 - 2728579 - GR 73 -10 -2.94218 | opp_overlap 2728573, overlap 2728581 ATTGGGTACCAGAGA CAGTGC ATC GCACTG CGCTGTTGTCACATC sufC 2729587 - 2728841 - | cysteine desulfurase ATPase component YPTB2313 2731283 - 2729772 - | cysteine desulfurase activator complex subunit SufB TERM 2925 2729928 - 2729941 + g 78 -5.3 -4.90906 | opp_overlap 2729928, overlap 2729936 CAAGCAATAGAACAG TTGGT CATC ACCAA TTTTTGATGTTGTGG TERM 2926 2730406 - 2730432 + g 70 -2.3 -4.83615 | gap 1, opp_overlap 2730391, overlap 2730426 CCTGCAAACCAGTTT TGCA-CGGTGGA GTAC TTCACCTCTGCA TTTTTGTGCAGAATG TERM 2927 2730489 - 2730503 + g 79 -11.4 -3.1355 | ATAGCTGTCGCGCAC GGGTGC CGA GCACCC TTCGATATAGCTGAC sufA 2731669 - 2731298 - | iron-sulfur cluster assembly scaffold protein TERM 2928 2731524 - 2731512 - G 71 -6.9 -4.28977 | opp_overlap 2731511 ATAACATAGGCAAAA CCGGC ACA ACCGG ACTGTTTGACGCCGA TERM 2929 2732274 - 2732256 - R 78 -5.3 -5.03314 | gap 1 GCTATTGGCAAAAAA TGACGACG TTAG CG-CGTCA ATACGGCGATCGTTA YPTB2315 2732680 - 2732264 - | hypothetical protein YPTB2316 2735858 - 2732802 - | hypothetical protein TERM 2930 2733138 - 2733163 + g 95 -13.3 -3.87075 | CTCACCACTGATTTG CTGCTCTGGCT GATC AGCCAGAGCCG TTTGTAACCACTCGT TERM 2931 2733893 - 2733840 - G 76 -11.8 -2.90763 | opp_overlap 2733891 TTTACACGCCAGACA GCCAGCCATGGATTCTTTGACTTC ATGTGA GAAATCATAGACCCCTTGACTGGC CTGCCAACTGTTGCG TERM 2932 2735774 - 2735784 + g 74 -6.8 -4.4078 | opp_overlap 2735783 TAGTAGCAGTATCGC CGGT AAA ACCG TTTTGCTTCAAAGCG TERM 2933 2735824 - 2735809 - G 77 -4 -5.03747 | overlap 2735811 AAAGCGTCCAAAAAA TCCAGT ACCG ACTGAA TGACACCCGGTGCCT YPTB2317 2736496 - 2737599 + | putative inner membrane protein TERM 2934 2737603 - 2737637 + T 100 -13.7 -3.06087 | overlap 2737599 2737606 GAAGAGCTTTAACCC TAAGGGGTTTGGTGG TTATT CTGCCGAACCCCTTA TATTCAGCATATATT TERM 2935 2737606 - 2737634 + T 84 -11 -3.67052 | overlap 2737599 2737603 GAGCTTTAACCCTAA GGGGTTTGGTGG TTATT CTGCCGAACCCC TTATATTCAGCATAT TERM 2936 2737773 - 2737783 + T 86 -2.6 -5.7946 | ATCTCATTCTACTTC TTAT TTA ATAA TTTTTTTATTCAGAG TERM 2937 2737943 - 2737962 + T 100 -9.3 -6.43839 | CTGTGTGTAGTCTTT GCCTGTC ACCTAA GACAGGC TTTTTTTTTTGCTAT TERM 2938 2738153 - 2738134 - T 100 -10 -5.47399 | overlap 2738123 TTAATTGCAAAAAAA TCCGCAAC CTAA GCTGCGGA TGATGAATACCTATA ppsA 2740620 - 2738236 - | phosphoenolpyruvate synthase TERM 2939 2739143 - 2739131 - G 71 -4.7 -4.54727 | overlap 2739116 2739132 CGGGCGAAATCAAAA GCCCG GTC CGGGT TGCCAACATTCATCA YPTB2319 2740995 - 2741816 + | hypothetical protein TERM 2940 2742088 - 2742074 - g 74 -10 -3.50393 | GGTTATTGCAGATAA CGTGAC AGC GTCACG TAAACGAATAGAGAA aroH 2741973 - 2743019 + | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 2941 2743069 - 2743117 + T 95 -7.8 -5.00616 | gap 1, opp_overlap 2743084, overlap 2743071 2743112 ATTAAATGAATACCT TCGGGATAGGGAAAAGTTAAC GTTGTCGG GTTAACTTTT-TCTATCCCTA TTTTTTCCGAAAAAA TERM 2942 2743071 - 2743115 + T 91 -10.4 -4.13561 | gap 1, opp_overlap 2743084, overlap 2743069 2743112 TAAATGAATACCTTC GGGATAGGGAAAAGTTAAC GTTGTCGG GTTAACTTTT-TCTATCCC TATTTTTTCCGAAAA YPTB2321 2744651 - 2743188 - | hypothetical protein lplA 2745719 - 2744703 - | lipoate-protein ligase A nlpC 2746308 - 2745844 - | putative lipoprotein pmrM 2746974 - 2746588 - | hypothetical protein pmrL 2747315 - 2746971 - | hypothetical protein TERM 2943 2747121 - 2747094 - G 85 -9.9 -4.32571 | CAACACAAAATTAAA GCTGAGCATAG GATAGG CCACGCTCAGC GGGAGTTGCTGCAAT TERM 2944 2747242 - 2747194 - G 87 -13.1 -3.34895 | opp_overlap 2747211 GCTATCGCCAACCAA CGCAATGTCAGATTCAACCGCCG GGC CTGCGGTTGCTCCCAACACTGCG CAGCCTGTTTTTGAC arnT 2748976 - 2747312 - | 4-amino-4-deoxy-L-arabinose transferase TERM 2945 2748777 - 2748787 + g 83 -8.2 -4.59773 | opp_overlap 2748777 2748776 2748774 TTATTAAACCAATAC CCGG CGA CCGG TTTTTCAAAATAACG pmrJ 2749878 - 2748973 - | hypothetical protein TERM 2946 2749742 - 2749725 - G 80 -6.9 -4.7254 | opp_overlap 2749724, overlap 2749727 AGCGCGGACGAAAAA GGCGCCA TAAA TGGCGTC CCATATTATCCGGCC pmrI 2751878 - 2749875 - | bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase TERM 2947 2751769 - 2751759 - G 87 -6.8 -5.10767 | overlap 2751751 GACCGAAGAGAAAAA GCGA TTC TCGC CAGGATTATCAGTAT pmrF 2752858 - 2751875 - | undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase TERM 2948 2752616 - 2752598 - G 81 -11 -3.76492 | opp_overlap 2752598 GCTAACCTGATTAAA TCCCGCCA TAA TGGCGGAA TGTTGACCATAATTA pmrH 2753999 - 2752845 - | UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase btuD 2755110 - 2754349 - | vitamin B12-transporter ATPase btuE 2755686 - 2755132 - | putative glutathione peroxidase btuC 2756763 - 2755756 - | vtamin B12-transporter permease TERM 2949 2756973 - 2756929 - R 75 -8.7 -3.63515 | opp_overlap 2756929 2756927 CTTTATTGCTAATAA GTCGCTAACTCTGCTTGGTCA TAG CAAACAAGTAAAGTTAGCAAC TGTTTGTTATGCTCG YPTB2334 2757445 - 2756990 - | hypothetical protein TERM 2950 2757745 - 2757760 + r 100 -11.8 -4.52589 | opp_overlap 2757745 TCTTGAAAAGAAAAA GGCCGC TTGC GCGGCC TTTTATGTCGGAAAC TERM 2951 2757760 - 2757745 - R 100 -11.8 -5.45802 | opp_overlap 2757745 TCTTGAAAAGAAAAA GGCCGC TTGC GCGGCC TTTTATGTCGGAAAC ihfA 2758075 - 2757779 - | integration host factor subunit alpha pheT 2760467 - 2758080 - | phenylalanyl-tRNA synthetase subunit beta pheS 2761464 - 2760481 - | phenylalanyl-tRNA synthetase subunit alpha TERM 2952 2760606 - 2760590 - G 75 -8 -4.29176 | ATACCGAATGCAAAA CCTGAG TAAAT CTCAGG ATCGATACCGACATT TERM 2953 2761348 - 2761359 + g 75 -3.6 -5.09895 | overlap 2761337 CGATGTCATTTGAAG GGTC AAGT GGCC TTTTTTACCTAGATA TERM 2954 2761773 - 2761756 - R 100 -8.4 -6.04324 | GTAAAAAACAAAAAA GCCTCC ACGATG GGAGGC TTCGGCGCTATTTTT YPTB2338 2761865 - 2761821 - | hypothetical protein TERM 2955 2761950 - 2761932 - R 100 -10.3 -4.49756 | opp_overlap 2761927 2761932 GTGCAAAGATTAAAA GAGGGAG ACAAG CTCCCTC TTCAATTCTGACTTA TERM 2956 2761932 - 2761950 + r 78 -10.3 -3.2496 | opp_overlap 2761932, overlap 2761927 GTGCAAAGATTAAAA GAGGGAG ACAAG CTCCCTC TTCAATTCTGACTTA rplT 2762319 - 2761963 - | 50S ribosomal protein L20 rpmI 2762554 - 2762357 - | 50S ribosomal protein L35 infC 2763202 - 2762651 - | translation initiation factor IF-3 thrS 2765134 - 2763206 - | threonyl-tRNA synthetase TERM 2957 2763439 - 2763451 + g 79 -3.3 -5.32565 | CTTTTGCTCTAATAC CCGCA TCT TGCAG TTTTTTGGTTACTTG TERM 2958 2765667 - 2765685 + G 85 -3 -5.56568 | overlap 2765669 ATCAAAACTTTATGT CTGCCGTT TCG AAAGGCCG TTTTTTTGATGGTGT YPTB2343 2765525 - 2765737 + | hypothetical protein TERM 2959 2766376 - 2766403 + G 100 -13.5 -5.19275 | TGGTTACTGGAACGT CGCCCTGATTG TTTATT CAATCGGGGCG TTTTATTTTCTGGCT YPTB2344 2766047 - 2766424 + | hypothetical protein marC 2767066 - 2767749 + | multiple drug resistance protein MarC YPTB2346 2768533 - 2767871 - | putative membrane-bound lytic murein transglycosylase TERM 2960 2768422 - 2768433 + g 81 -3.6 -5.40072 | CTACGTTAAGAGAAT TGCC CTGT GGCG TTTTTTTCAGCCACC TERM 2961 2768516 - 2768503 - G 83 -6.7 -4.89477 | CCGCCAACAATAAAA TTGCC ATTA GGCAA CCGACTTTTGAATTC yfeA 2768745 - 2769713 + | ABC transporter, periplasmic iron siderophore-binding protein YfeA yfeB 2769710 - 2770600 + | ABC chelated iron transporter, ATP-binding subunit yfeB yfeC 2770600 - 2771484 + | ABC chelated iron transporter, permease subunit yfeC TERM 2962 2771645 - 2771662 + G 75 -5.5 -4.67755 | TTCTCATGCTGTGCT GCCAGGG ATTG TTCTGGC TTTTTGGCTCGGTAT yfeD 2771481 - 2772374 + | ABC chelated iron transporter, permease subunit yfeD YPTB2351 2772442 - 2772654 + | hypothetical protein YPTB2352 2772679 - 2773554 + | hypothetical protein yfeE 2774237 - 2773683 - | putative yfeABCD locus regulator TERM 2963 2774301 - 2774315 + H 76 -10 -3.36195 | overlap 2774290 2774300 2774298 ACATCCACACGTTGT GCGGTA CTT TACCGC TATGTTTGCTATTTA YPTB2354 2774648 - 2775313 + | 2-deoxyglucose-6-phosphatase TERM 2964 2775436 - 2775423 - T 71 -2.3 -5.14563 | overlap 2775404 2775403 2775424 CTTTTTAGTAAAAAA GTCGC TATA GCGAT ACGGAGTGGAAAGGA TERM 2965 2775506 - 2775477 - T 93 -10.7 -4.16842 | gap 1, opp_overlap 2775476 2775473, overlap 2775478 GTCAGCGGTAATAAA GGGCGGCCAGAGTC AGT GACTC-AGCCGCCG AATATATTTTAGAGA TERM 2966 2775505 - 2775478 - T 100 -14.2 -3.09784 | gap 1, opp_overlap 2775476 2775473, overlap 2775477 TCAGCGGTAATAAAG GGCGGCCAGAGTC AGT GACTC-AGCCGCC GAATATATTTTAGAG kdgF 2775847 - 2775515 - | pectin degradation protein kduI 2776183 - 2777019 + | 5-keto-4-deoxyuronate isomerase TERM 2967 2777051 - 2777035 - f 70 -7.2 -3.77196 | opp_overlap 2777035 GTATCACCTATTAAA GCCACC TTTAC GGCGGC TTTCACCTCCAATAA TERM 2968 2777264 - 2777284 + G 71 -4.6 -4.59773 | opp_overlap 2777261 2777264 GAGACTATCGAACAA GTGACTGC ACTGG GCCGTCGC TTTTTCAGCCTGACC kduD1 2777111 - 2777872 + | 2-deoxy-D-gluconate 3-dehydrogenase TERM 2969 2777968 - 2777987 + F 100 -12.2 -6.01369 | opp_overlap 2777965 CTCAAAAACGCATCA GGCACAAC TTTG GTTGTGCC TTTTTTTATTATTTA TERM 2970 2778083 - 2778067 - f 91 -3.7 -5.83211 | CACCAAAATAAAAAA TCAAAAC AAC GTTCCGA CTTCGATCACACTTT pelW 2778217 - 2779884 + | exopolygalacturonate lyase YPTB2359 2779925 - 2780815 + | putative ABC sugar transporter (permease) YPTB2360 2780808 - 2781728 + | putative sugar ABC transporter (permease) YPTB2361 2781742 - 2782869 + | putative sugar ABC transporter, ATPase subunit TERM 2971 2783424 - 2783413 - g 80 -4.4 -5.30616 | opp_overlap 2783413 2783415 GTATTTAAAGAAAAA TTGG GTGA CCAA TATTACCCTGTTGTA YPTB2362 2782885 - 2784177 + | putative ABC type periplasmic sugar-binding protein TERM 2972 2784204 - 2784241 + F 100 -14.4 -3.74693 | opp_overlap 2784204 2784209, overlap 2784209 ATTTAACTTAAGTCA CAAAATAACCCTGCCA TTTATT TGGTGGGGTTATTTTG TTTAATCAAATAAAA TERM 2973 2784241 - 2784204 - f 71 -10 -2.57192 | opp_overlap 2784204 2784209, overlap 2784209 ATTTAACTTAAGTCA CAAAATAACCCTGCCA TTTATT TGGTGGGGTTATTTTG TTTAATCAAATAAAA TERM 2974 2784209 - 2784236 + F 100 -8.5 -4.93877 | opp_overlap 2784209 2784204, overlap 2784204 ACTTAAGTCACAAAA TAACCCTGCCA TTTATT TGGTGGGGTTA TTTTGTTTAATCAAA TERM 2975 2784377 - 2784389 + F 100 -6.3 -5.71983 | opp_overlap 2784377 2784376 2784369 ATGACAACAATAAAT GAAAC ATT GTTTC TTTTTTTGTGGTTGC YPTB2363 2784476 - 2785186 + | putative oligogalacturonate specific porin TERM 2976 2785254 - 2785283 + F 100 -13.1 -5.53288 | gap 1, opp_overlap 2785261 2785262 CTCTGCATTATTTTG GGGAAAAGTTGACT CCC AGTCA-CTTTTCCC TTTTTTTAGCTTAGC TERM 2977 2786021 - 2786060 + G 81 -11.2 -3.76641 | opp_overlap 2786018 TGGCCGATATGATTA CGCCAGCCGGTGTGCCGC TATT GTGGCCCTGCCGCTGGCG TTTCAGTATTCCGCT ydjM 2785663 - 2786211 + | hypothetical protein TERM 2978 2787581 - 2787606 + G 71 -10.3 -2.86271 | overlap 2787578 GGGTGTTGCCGGTGT GGGTGGCGGTG CAAC CTTCGCCGCCC TAATTGTACTGCCCG gltP 2786415 - 2787806 + | DAACS family sodium/dicarboxylate symporter ybjR 2788872 - 2788021 - | N-acetylmuramoyl-L-alanine amidase TERM 2979 2789134 - 2789154 + r 82 -6.8 -4.82901 | opp_overlap 2789134 TCATGTGATGAAAAA CAGCCCCT GCCAG AGGAGCTG TTTTTATAAAAAGAG TERM 2980 2789154 - 2789134 - R 100 -9 -4.7373 | opp_overlap 2789134 TCATGTGATGAAAAA CAGCCCCT GCCAG AGGAGCTG TTTTTATAAAAAGAG kdgR 2790038 - 2789247 - | IclR family transcriptional regulator TERM 2981 2790212 - 2790186 - R 100 -12.4 -3.88498 | CTTGCAGACAGCAAA TTAGCCTCTTTC TAA GAGAGAGGCTAA TGGAAAACTCGGCTA ogl 2791391 - 2790225 - | oligogalacturonate lyase TERM 2982 2792174 - 2792199 + G 85 -11.3 -3.81691 | overlap 2792157 TCGAGCCCAACTTGG TCGAGGTATTG GTAT CAATACCTTGA TTGTTGCTGTGTCTT YPTB2369 2791758 - 2793125 + | major facilitator superfamily multidrug efflux transporter YPTB2370 2793982 - 2793179 - | putative chaperone protein YPTB2371 2795142 - 2793979 - | putative fimbrial protein htrE 2797751 - 2795139 - | putative outer membrane fimbrial usher porin TERM 2983 2795455 - 2795465 + g 75 -5.4 -4.68994 | opp_overlap 2795446, overlap 2795451 GCAACAGCACCTGCG GTTG GCG CAAC TTTTTGGCTAGTACT TERM 2984 2797835 - 2797784 - R 72 -10 -2.84999 | opp_overlap 2797784 2797799, overlap 2797799 ATTAAATGCAGTATA TAAAAGTGCAAAAAATACAAATTA CCCT TAATTTGTATTTTTTATAGTTTTA TTGGGTCAGTTTTTG TERM 2985 2797784 - 2797835 + r 74 -10 -3.14261 | opp_overlap 2797784 2797799, overlap 2797799 ATTAAATGCAGTATA TAAAAGTGCAAAAAATACAAATTA CCCT TAATTTGTATTTTTTATAGTTTTA TTGGGTCAGTTTTTG TERM 2986 2797799 - 2797820 + r 95 -7.5 -5.4588 | opp_overlap 2797799 2797784, overlap 2797784 TAAAAGTGCAAAAAA TACAAATTA CCCT TAATTTGTA TTTTTTATAGTTTTA TERM 2987 2797820 - 2797799 - R 90 -7.5 -5.15117 | opp_overlap 2797784 2797799, overlap 2797784 TAAAAGTGCAAAAAA TACAAATTA CCCT TAATTTGTA TTTTTTATAGTTTTA ecpD 2798612 - 2797833 - | putative chaperone protein TERM 2988 2798644 - 2798662 + r 100 -10.3 -4.386 | opp_overlap 2798643 2798642 TCGAACTTATAAAGC TGGGAGC ACTAA GCTCCCA TTTTATGCCGGATTG YPTB2374 2799392 - 2798850 - | putative fimbrial protein TERM 2989 2799782 - 2799767 - R 100 -4.8 -5.9362 | GAAAAGACAAAAAAA TTCATT TTTC AATGAA GTAAGTCACAGATTT TERM 2990 2799972 - 2799944 - R 100 -13.2 -5.44119 | GCCACGGTAAAAAAA CACCCTGTCAGC TTACC GCTCACAGGGTG TGAAGACCATATTAT htpX 2800931 - 2800050 - | heat shock protein HtpX TERM 2991 2801372 - 2801351 - R 100 -8.7 -6.31682 | opp_overlap 2801351 AAAAGCAAAAAAAAA TCCGAGTCC AATA AGACCCGGA TTCTTCATATTATTT prc 2803472 - 2801394 - | carboxy-terminal protease proQ 2804205 - 2803492 - | putative solute/DNA competence effector TERM 2992 2803749 - 2803776 + g 74 -2.7 -5.08824 | overlap 2803749 TGCGGTTTTCCGGAG CC-GCACCCGCTT CACG ACGCGG-TGCAGG TTTTTTACCTGCCGG TERM 2993 2804027 - 2804048 + g 78 -10.9 -3.29147 | GTGTAGAGACGCAGC GCAGAACGC AATT GCGTTTTGC TTAAATTCTCTTCCC TERM 2994 2804149 - 2804139 - G 80 -8.2 -4.41348 | CGGCGGTGAAACAAA GCGG GAA CCGC TCGGCCAAAAAGGCT TERM 2995 2804273 - 2804254 - R 86 -12.2 -3.1552 | overlap 2804252 GCGCAGGCATGAACA GGCGTCAT TATA ATGACGCC ATCAGCAATTGCCAC YPTB2378 2804798 - 2804301 - | hypothetical protein TERM 2996 2804538 - 2804550 + g 75 -6.2 -4.4891 | ATGCACATTACCTAC CCGC TGAAC GCGG TTTTCTGCTACTGCG TERM 2997 2804889 - 2804870 - H 90 -10.8 -3.91642 | opp_overlap 2804870, overlap 2804826 AAAATAATCATTAAA TACCCTTG GCGA CAAGGGTA TTCCTCTGTAATGTT TERM 2998 2804870 - 2804889 + H 81 -10.8 -3.34936 | opp_overlap 2804826 2804870 AAAATAATCATTAAA TACCCTTG GCGA CAAGGGTA TTCCTCTGTAATGTT TERM 2999 2805203 - 2805218 + GH 71 -9 -3.39449 | GACCCGGTTGACCGC CATGGC TTGC GCCATG TTGCTGTTAATACCG yebS 2804925 - 2806277 + | hypothetical protein TERM 3000 2806725 - 2806706 - gf 72 -10 -2.76671 | opp_overlap 2806706, overlap 2806705 ATACTCAGCCTAAAT TCCGCCTG AATA CAGGCGAA TTAATGATTCATCTC TERM 3001 2808157 - 2808143 - gf 77 -8.5 -3.98282 | overlap 2808113 TGTATAGTAATGAAA CGGCC GCACG GGCCG TGGGTAGCCAGATTA YPTB2380 2806246 - 2808897 + | hypothetical protein TERM 3002 2809605 - 2809621 + G 71 -6.5 -4.29304 | opp_overlap 2809587 2809586, overlap 2809601 GCATTCAGTGGCACA CTGAGCG GGA CTCTCAG TTTGTATTGTAGTGC YPTB2381 2809377 - 2809931 + | hypothetical protein YPTB2382 2809937 - 2810467 + | hypothetical protein YPTB2383 2810488 - 2811045 + | hypothetical protein YPTB2385 2811932 - 2814379 + | outer membrane usher protein YPTB2386 2814585 - 2815574 + | hypothetical protein YPTB2387 2815782 - 2816021 + | hypothetical protein YPTB2388 2816520 - 2816131 - | hypothetical protein YPTB2389 2817553 - 2817320 - | hypothetical protein TERM 3003 2817440 - 2817466 + g 83 -2.2 -5.60993 | opp_overlap 2817440 CCATTCATCGAAAGA GTGTTCCGAG TAGCTAT CGCTGAACAC TTTTTTTATCGAGGA YPTB2390 2818964 - 2817708 - | putative lipoprotein TERM 3004 2817828 - 2817842 + g 79 -11.4 -3.19522 | opp_overlap 2817827 2817826 TCCTTCGGCATAACC CGCCTG ATA CAGGCG TTCCATCTTGACTGG TERM 3005 2819217 - 2819191 - R 72 -7.2 -3.9749 | gap 1, overlap 2819192 AGGCAGAAGAGTAAA GCGTCCGCGCC AGGGAG GGCGCGG-CTC GAGCCCCCAGGGATG YPTB2391 2819605 - 2819357 - | hypothetical protein alr 2820749 - 2821978 + | alanine racemase YPTB2393 2823549 - 2822596 - | hypothetical protein TERM 3006 2823611 - 2823582 - R 84 -10.7 -3.61089 | opp_overlap 2823583, overlap 2823583 CCCTAAGAAGTAGAA TCGGGCTGTGCAA AAAA TCGCACAACCCGT TAATGATTATTAAAC TERM 3007 2823610 - 2823583 - R 95 -14.2 -2.76171 | opp_overlap 2823583, overlap 2823582 CCTAAGAAGTAGAAT CGGGCTGTGCAA AAAA TCGCACAACCCG TTAATGATTATTAAA TERM 3008 2823583 - 2823610 + r 76 -9.8 -3.33171 | opp_overlap 2823583 2823582 CCTAAGAAGTAGAAT CGGGCTGTGCAA AAAA TCGCACAACCCG TTAATGATTATTAAA YPTB2394 2826291 - 2823649 - | putative surface protein TERM 3009 2824835 - 2824821 - G 75 -11.4 -2.64747 | opp_overlap 2824829, overlap 2824820 2824823 TGACCGCATCATAAT CAGCCG AAC CGGCTG CCACACCGGTGATCT TERM 3010 2825678 - 2825701 + g 70 -9.6 -3.09933 | gap 1 GCAATAGCATCCTGA CCCGCAGGCAC GGA GT-CTTGCGGG TTCACTGAGTTGGCG TERM 3011 2825780 - 2825766 - G 79 -11.4 -3.1506 | overlap 2825769 AAAGCTGGCTACCAA CCACCG CAT CGGTGG AGGTCGATGAAACCG YPTB2395 2827412 - 2826648 - | N-acetylmuramoyl-L-alanine amidase TERM 3012 2826938 - 2826917 - G 71 -7.3 -3.96624 | gap 1, overlap 2826934 TACCTGCATCATAAA GC-GCCTTCC ACG GAAAGGCTGC ACCTGGATCACTTTT TERM 3013 2827925 - 2827902 - R 100 -14.6 -4.11281 | TATGACAAGTATAAA CCGGCAGGGA CAAT TCCCTACCGG TTAGCGCTATCGATA cheZ 2828591 - 2827947 - | chemotaxis regulator CheZ cheY 2828990 - 2828601 - | chemotaxis regulatory protein CheY cheB 2830140 - 2829091 - | chemotaxis-specific methylesterase TERM 3014 2829648 - 2829669 + g 71 -3.8 -4.68593 | gap 1 CCTCAGTACCGCCAG TTGAT-GCC CCAAT GGCGATCAA TTTTTCACTGCTGAG cheR 2831012 - 2830140 - | chemotaxis methyltransferase CheR TERM 3015 2830288 - 2830264 - G 77 -6.4 -4.51799 | opp_overlap 2830265, overlap 2830265 AGCAAAGGTACAAAA CGACGCAGAA TGCGT TCCTGCGTCT CTTTATCAAAATAGA TERM 3016 2830287 - 2830265 - G 73 -9.9 -3.29995 | opp_overlap 2830265, overlap 2830264 GCAAAGGTACAAAAC GACGCAGAA TGCGT TCCTGCGTC TCTTTATCAAAATAG TERM 3017 2831098 - 2831130 + r 76 -10.7 -2.60808 | overlap 2831095 CTTTACAGCCACTTG TCGTTACTCGTGATG ACC CGTTACGAGTGATGA TCGATTGTCACTCCT tap 2832795 - 2831185 - | methyl-accepting chemotaxis protein IV (MCP-IV) (dipeptide ch... cheD 2834653 - 2832980 - | methyl-accepting chemotaxis protein TERM 3018 2833676 - 2833688 + g 71 -6.9 -4.16251 | overlap 2833687 CAATGCTAATTGACT CGCCT GAC GGGCG TTTTCAGCGTTCTGT TERM 3019 2834253 - 2834281 + g 73 -2.5 -5.03145 | opp_overlap 2834262, overlap 2834254 AGTTCGGTTAAGGCA CTAAAATATTCCT CGT AGGACTGTTTTAA TTTTTTGGCGCCTTC TERM 3020 2834630 - 2834612 - G 71 -8.9 -3.51158 | ACCAAATAATACTAA TACCAGC AGCAG GCTGGTA ACCACTTTCATACGC YPTB2402 2835595 - 2834894 - | hypothetical protein TERM 3021 2835072 - 2835082 + g 77 -6.8 -4.55689 | CGGAAGATATCGGCC GGTG TAG CACC TTTTCTGTGAATAGT YPTB2403 2838528 - 2835709 - | putative integral membrane protein TERM 3022 2836747 - 2836722 - G 75 -5.4 -4.70319 | gap 1 GTACCAAAACTAAAA GCTGACCC-GC GAGCA GCAGGGTTAGC GTAACCTGGCTGAAA TERM 3023 2837978 - 2837964 - G 71 -6.4 -4.30576 | CTTTCAGCAGGAAAA TGACAC CCA GTGCCA TGATCACACCGCCGA TERM 3024 2839014 - 2838989 - R 100 -16.2 -3.0644 | overlap 2838975 2838980 AGGCAAGCCGCAAGA GCAGGAGGGC CGGCCT GCCCTCCTGC GCGGTTGAGACGGCT TERM 3025 2839085 - 2839060 - R 71 -8.4 -3.54382 | gap 1, opp_overlap 2839059 2839064 2839084 CTGAACAAATATCAA CCAACACCTGA TCCTG TC-GGTGTTGG ATTCGTCGAAACCTT cheW 2839645 - 2839148 - | purine-binding chemotaxis protein TERM 3026 2839188 - 2839198 + g 80 -6.8 -4.70659 | AACGACATCTCTTCA CTGC TCA GCAG TTTTTCGATATCAAC cheA 2841979 - 2839808 - | chemotaxis protein CheA TERM 3027 2840119 - 2840083 - G 77 -10.1 -3.55084 | overlap 2840081 2840115 TTTTAACATCAAAGA CGCGGTACAATTCAACC AAT GGTAGAAATTCACCGCG AACTTGCAGCACGCG TERM 3028 2841252 - 2841220 - G 76 -9.2 -3.96148 | opp_overlap 2841220 2841223 TCTGCTCAGCATAAA TCTGCTCTGTGTCC TCTGC GGACACAAAGCTAA TCTGCTCAGGTTCCA TERM 3029 2841223 - 2841249 + g 72 -10.9 -2.66812 | opp_overlap 2841220, overlap 2841220 GCTCAGCATAAATCT GCTCTGTGTCC TCTGC GGACACAAAGC TAATCTGCTCAGGTT TERM 3030 2841437 - 2841457 + g 74 -11.1 -2.7535 | opp_overlap 2841433 2841432, overlap 2841433 CAAACGAATACGCAT CCCGCCTTG AAG CAACGCGGG TGATGTGTTGCCAGC TERM 3031 2841960 - 2841947 - G 74 -3.1 -5.14563 | TGCTTCATCAAAAAA CGTCT GATA AAACG CGGTAATATCCATGC motB 2843309 - 2841990 - | flagellar motor protein MotB TERM 3032 2842429 - 2842451 + g 74 -2.6 -5.03994 | opp_overlap 2842434, overlap 2842430 ACCGTCCCGTGAGTA TCAATCTGCT TTA AGCCGGTTGC TTTTTCTATATCCAG TERM 3033 2842732 - 2842754 + g 78 -11.4 -3.00476 | opp_overlap 2842723, overlap 2842737 AGATCATCGGTGTGA CCGGATAAAC TGA GTTTATTCGG TATGTCATTCAGGAT motA 2844193 - 2843306 - | flagellar motor protein MotA TERM 3034 2843470 - 2843484 + g 80 -8.6 -4.40993 | ACAGCAGAGTCACTT TGATGC ATT GCATCA TTTTGGTCGTTTCTG flhD 2845332 - 2844982 - | transcriptional activator FlhD TERM 3035 2845394 - 2845370 - R 78 -7.3 -4.45168 | GTTTTAAAACATAAA TTGAATGACAA AAT TTATCACTCAA AACCAGGGATCCTTC TERM 3036 2846486 - 2846446 - R 71 -9.1 -3.36569 | opp_overlap 2846450 2846452, overlap 2846444 2846448 2846450 CTAATCTTTTAAATA CACACACTATTCCAGGG CAGCCCC CCCCGGAATAGTGTCTT GAGATCAACCAGGCT TERM 3037 2846484 - 2846448 - R 86 -11.7 -3.24976 | opp_overlap 2846450 2846452, overlap 2846446 2846444 2846450 AATCTTTTAAATACA CACACTATTCCAGGG CAGCCCC CCCCGGAATAGTGTC TTGAGATCAACCAGG TERM 3038 2846482 - 2846450 - R 100 -14.3 -3.18571 | opp_overlap 2846450 2846452, overlap 2846448 2846446 2846444 TCTTTTAAATACACA CACTATTCCAGGG CAGCCCC CCCCGGAATAGTG TCTTGAGATCAACCA TERM 3039 2846450 - 2846482 + r 86 -12.1 -3.05844 | opp_overlap 2846448 2846446 2846444 2846450, overlap 2846452 TCTTTTAAATACACA CACTATTCCAGGG CAGCCCC CCCCGGAATAGTG TCTTGAGATCAACCA mgtB 2849219 - 2846520 - | Mg(2+) transport protein B, P-type ATPase TERM 3040 2848177 - 2848196 + g 73 -7.8 -4.11484 | opp_overlap 2848166, overlap 2848178 ACCACGACTTTACGC CGGGCCAT CGCG ATGGCCCC TTTTGCCAGATTAGA TERM 3041 2848178 - 2848195 + g 74 -11.3 -3.06569 | overlap 2848177 CCACGACTTTACGCC GGGCCAT CGCG ATGGCCC CTTTTGCCAGATTAG mgtC1 2850326 - 2849628 - | magnesium ABC transporter ATPase TERM 3042 2851803 - 2851790 - g 80 -4.5 -5.055 | GCAAGGCCTAAAAAA TGCAG AAGG CCGCA TAGCTCAGTCACAGC TERM 3043 2852466 - 2852437 - g 75 -7.9 -4.1822 | gap 1, overlap 2852438 CTTCACTTGAACAAA CTGCGGCCAGCATG GAG CA-ACTGACCGCAA CCGTGAAACAGAATG trg 2851452 - 2853191 + | methyl-accepting chemotaxis protein III (MCP-III) (ribose and... TERM 3044 2853294 - 2853323 + T 100 -8 -5.252 | gap 2, opp_overlap 2853294 GATAAAAAGCAAAAA CCGGAGGATAAGGT ATGA ACCTT--CCTCCGG TTTTTTATCGCAATA TERM 3045 2853323 - 2853294 - T 95 -8 -5.2197 | gap 2, opp_overlap 2853294 GATAAAAAGCAAAAA CCGGAGGATAAGGT ATGA ACCTT--CCTCCGG TTTTTTATCGCAATA YPTB2413 2853565 - 2853374 - | hypothetical protein TERM 3046 2853740 - 2853753 + r 100 -9.5 -5.67063 | opp_overlap 2853740 ACAGACAGTAAAAAA CCCGC CTTA GCGGG TTTTTTTATAATCAG TERM 3047 2853753 - 2853740 - R 100 -9.5 -5.25893 | opp_overlap 2853740 ACAGACAGTAAAAAA CCCGC CTTA GCGGG TTTTTTTATAATCAG cspC 2853992 - 2853780 - | cold shock protein TERM 3048 2856257 - 2856275 + G 90 -10.2 -4.42806 | GGCATTTCGTCAGTA CCCGCGCT TAC AGGGCGGG TTTATTTGGGACTGG lacZ 2854533 - 2857733 + | beta-D-galactosidase TERM 3049 2857919 - 2857937 + F 100 -11 -5.9003 | opp_overlap 2857918 CTTTGCAAAATTTAC GCGCTCAT CCT ATGGGCGC TTTTTTTGTTCCTTT TERM 3050 2858003 - 2858015 + F 71 -2 -5.15969 | TGATAGTTACGCACG TTCA CTCTA TGAA TTTTTTCCATTACAC YPTB2416 2858140 - 2859150 + | Zinc-binding dehydrogenase TERM 3051 2859295 - 2859275 - f 76 -9.7 -3.37879 | opp_overlap 2859254, overlap 2859265 AGCAAGGGCAACTAA CCCCCTTCA TCT TGAAGGGCG ACGGGTATAAAGGGT ylaC 2859433 - 2859966 + | hypothetical protein TERM 3052 2860778 - 2860789 + G 73 -2.2 -5.03747 | GTGTGACAAAATAAC CGGT GATG ACTG TTTTTTGAGCCGTTT YPTB2418 2860491 - 2860940 + | transcription regulator AsnC TERM 3053 2861660 - 2861648 - g 71 -4.1 -4.66537 | GGTTGCAACATAAAA TCGGT ATC ACCAA GCGCCCCCGTAGCCA YPTB2419 2861029 - 2861931 + | hypothetical protein YPTB2420 2862234 - 2862437 + | hypothetical protein TERM 3054 2862562 - 2862574 + T 95 -3.3 -5.93809 | overlap 2862563 TTGGCCTGCCTTTTA TTGGG CCA CCCGG TTTTTTTTATGACAG YPTB2421 2864056 - 2862731 - | phosphoanhydride phosphorylase TERM 3055 2863339 - 2863357 + g 81 -8.1 -4.51847 | opp_overlap 2863334, overlap 2863351 TCGATGATAACGCCA GTGGCCC ACTGA GGGTCAC TTTTGTCCCTTCTTT YPTB2422 2864995 - 2864588 - | hypothetical protein YPTB2423 2865131 - 2865988 + | hypothetical protein TERM 3056 2867370 - 2867383 + G 71 -3.8 -4.67607 | overlap 2867367 2867366 GATCGTGCGCACGGG GTGG CTCTCC CCAC TTTCTTTGTTCCAAA aer 2866909 - 2868489 + | putative methyl-accepting chemotaxis protein YPTB2425 2868609 - 2868869 + | hypothetical protein TERM 3057 2868907 - 2868926 + F 79 -7.8 -4.2558 | overlap 2868908 TTCCTCAATACATTC AGCCCTCA ATAT TGAGGGCG TTTTACTGCCGCCTG TERM 3058 2868908 - 2868925 + F 84 -11.3 -3.15027 | overlap 2868907 TCCTCAATACATTCA GCCCTCA ATAT TGAGGGC GTTTTACTGCCGCCT TERM 3059 2869398 - 2869408 + G 80 -6.8 -4.72986 | CTGCCCGAGAGTTTG GCTG GAA CAGC TTTTTAGTGAACCTA cscR 2869124 - 2870167 + | LacI family sucrose operon repressor TERM 3060 2870289 - 2870248 - T 100 -14.7 -3.54 | opp_overlap 2870255, overlap 2870249 2870251 2870255 AGCACGCCATAAATA GTATAAACTTCACGAAAGC ATAA GCCCTCGTGAAGTTTATAG ATACGTCAGAATTAC TERM 3061 2870288 - 2870249 - T 100 -18.2 -2.71918 | opp_overlap 2870255, overlap 2870248 2870251 2870255 GCACGCCATAAATAG TATAAACTTCACGAAAGC ATAA GCCCTCGTGAAGTTTATA GATACGTCAGAATTA TERM 3062 2870286 - 2870251 - T 100 -16.4 -2.90065 | opp_overlap 2870255, overlap 2870249 2870248 2870255 ACGCCATAAATAGTA TAAACTTCACGAAAGC ATAA GCCCTCGTGAAGTTTA TAGATACGTCAGAAT TERM 3063 2870255 - 2870282 + T 77 -8.4 -3.92869 | opp_overlap 2870255 2870251 2870249 2870248 CATAAATAGTATAAA CTTCACGAAAGC ATAA GCCCTCGTGAAG TTTATAGATACGTCA TERM 3064 2870282 - 2870255 - T 100 -12.8 -4.12037 | opp_overlap 2870255, overlap 2870251 2870249 2870248 CATAAATAGTATAAA CTTCACGAAAGC ATAA GCCCTCGTGAAG TTTATAGATACGTCA icdA 2871554 - 2870301 - | isocitrate dehydrogenase TERM 3065 2871628 - 2871650 + H 83 -12 -2.80113 | TGAATATTCGTTCCG CGCCAATCCG AAA CGGATTGGGG TATAATGCGCTAATC TERM 3066 2871757 - 2871775 + G 74 -9.5 -3.57389 | overlap 2871755 GCCAGGCAGTCCCCC CCCGCTG CGCCA CGGCGGG TATTGTTATTCAATA ymfC 2871685 - 2872311 + | putative pseudouridine synthase TERM 3067 2872408 - 2872391 - g 71 -2.6 -5.00339 | overlap 2872392 ATCAACAATGAAAAA CGCTGG AACCAG CCAGCC GGTCATCTGGAAGCC YPTB2429 2872304 - 2872750 + | hypothetical protein TERM 3068 2872987 - 2872961 - g 79 -3.5 -5.30686 | opp_overlap 2872967, overlap 2872963 AATAGCCAGAAAAAA GTCATCGTCGG CATGT CCGGCGGTGTC GACTCTTCCGTTTCC TERM 3069 2873371 - 2873355 - g 71 -6.5 -4.13945 | opp_overlap 2873354 ATGTTGATGGTAAAA GCCGC CTACTGC GCGGC CTTGATGGAAATAAA trmU 2872937 - 2874052 + | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase YPTB2431 2874110 - 2874736 + | hypothetical protein TERM 3070 2875223 - 2875243 + G 71 -10.4 -2.8082 | overlap 2875222 GCTCGCCAGGATGTC CTGCTGCC CGCAT GGCGGCAG ATTATTGACTCAATA purB 2874797 - 2876167 + | adenylosuccinate lyase TERM 3071 2876179 - 2876224 + F 100 -13 -3.34192 | gap 1, opp_overlap 2876182 2876184, overlap 2876182 GTAATATTTTTTATC TAATACAGGTGGC-TTAGTTT GGTAA AAGCTAACGCCATCTGTATTA TTCCTTCCCCCCCTT TERM 3072 2876182 - 2876221 + F 86 -10.3 -3.81146 | gap 1, opp_overlap 2876182 2876184, overlap 2876179 ATATTTTTTATCTAA TACAGGTGGC-TTAGTTT GGTAA AAGCTAACGCCATCTGTA TTATTCCTTCCCCCC TERM 3073 2876521 - 2876501 - g 74 -6.9 -4.42386 | GTTTGACCGACAAAA TTATAGCCA TAT TGGCAATAA AAATATGGGTGGGAT YPTB2433 2876355 - 2876978 + | putative lipoprotein phoP 2877189 - 2877860 + | DNA-binding transcriptional regulator PhoP TERM 3074 2878711 - 2878698 - g 73 -8.1 -4.13014 | CTCACAGCCTTAAAA CACCG CTGG CGGTG CTACAAACCACACTA phoQ 2877866 - 2879320 + | sensor protein PhoQ YPTB2436 2879404 - 2880525 + | hypothetical protein TERM 3075 2880738 - 2880722 - T 84 -10.8 -3.72051 | opp_overlap 2880722 GTCAATAACCTCAAA CGCCCC TTTTC GGGGCG TTTCTCTCTATCGTT TERM 3076 2880722 - 2880738 + T 93 -10.8 -4.1897 | opp_overlap 2880722 GTCAATAACCTCAAA CGCCCC TTTTC GGGGCG TTTCTCTCTATCGTT pepT 2881993 - 2880758 - | peptidase T TERM 3077 2881580 - 2881590 + g 71 -6.8 -4.14739 | CGCTTTATCATCCGC CCCT AAC AGGG TTTTACCATCAGTCG cobB 2883159 - 2882323 - | NAD-dependent deacetylase TERM 3078 2883196 - 2883210 + r 85 -7.2 -4.83615 | TATCTGTCTTGTTAT TAATCG TGA CGATTA TTTTTCTGCCAAATG YPTB2439 2884122 - 2883208 - | N-acetyl-D-glucosamine kinase TERM 3079 2883755 - 2883723 - G 70 -9.8 -3.2327 | opp_overlap 2883726, overlap 2883712 2883726 2883742 TTAACCCACCACCAA CACCGGTGCCGAGA ATAAG CCCCAGCACCGTTG GGTAAGTGCGAAACT TERM 3080 2883880 - 2883854 - G 74 -10.9 -2.85069 | opp_overlap 2883852, overlap 2883851 2883849 AAGCGGGAAAGATCA GCCTGCAATGG TTGCC CCATCGCAGAC GGTACATTCGCAGTA lolE 2885388 - 2884141 - | outer membrane-specific lipoprotein transporter subunit LolE lolD 2886092 - 2885388 - | lipoprotein transporter ATP-binding subunit lolC 2887287 - 2886085 - | outer membrane-specific lipoprotein transporter subunit LolC TERM 3081 2886813 - 2886797 - G 79 -10.1 -3.78775 | opp_overlap 2886797 CTCGGTACCATCAAA CGCAGTG TTT CACCGCG TTTAACCCCGAGCTG TERM 3082 2887232 - 2887216 - G 100 -10.1 -4.5123 | AAGCCACGAAACAAA CCGACCG AAG CGGTCAG AAGCACGCCCACGCA TERM 3083 2889532 - 2889510 - g 74 -6.3 -4.34486 | gap 1, overlap 2889507 2889512 ACCAATAATAAACAA GTGGCGGTGT TGGT AC-CCACCAC CCTGCTGGCTCAACA mfd 2887557 - 2891003 + | transcription-repair coupling factor ycfJ 2891781 - 2891242 - | hypothetical protein TERM 3084 2891910 - 2891928 + r 70 -7.3 -3.85698 | TAAAATACCGGGATA CGGCGTG CGTGA CTCGCCG TTTGTAAACACAGGG YPTB2445 2892505 - 2892092 - | hypothetical protein YPTB2446 2893217 - 2892513 - | hypothetical protein TERM 3085 2893409 - 2893396 - R 70 -3.7 -4.84311 | overlap 2893397 GTGCACATAAGAAAA TGCGC CGTA GCGCC AGGCCCCCCAACGTC TERM 3086 2893495 - 2893516 + r 95 -13.1 -3.15663 | overlap 2893511 TGCTAGCCCGCAGGG TGAGCCTCA CGAA TGAGGCTCA TTAATCCCGATGAGT ndh 2895106 - 2893802 - | NADH dehydrogenase TERM 3087 2894814 - 2894826 + g 81 -7.7 -4.6313 | opp_overlap 2894813 TGTTCATCACAAATC TCAGC CAG GCTGA TTGTTTTGTTTTCAC YPTB2448 2896022 - 2895480 - | hypothetical protein ycfO 2897181 - 2896150 - | beta-hexosaminidase TERM 3088 2897283 - 2897271 - R 86 -7.7 -4.68919 | AAAGACAAATTAAAA CGTTG GCG CAACG GCGCGGCCCATGCCA YPTB2450 2898118 - 2897252 - | hypothetical protein TERM 3089 2897926 - 2897946 + g 78 -7.6 -4.37658 | ATTTACGCTCACGTC GTCGGTTG ACCCC CAACTGAC TTTTGTGCGGCGATT TERM 3090 2898042 - 2898068 + g 75 -11.7 -2.72568 | gap 1, opp_overlap 2898042 2898045 2898046, overlap 2898041 2898039 ACCGGGCTAATATGA CAAT-CGGCGGT TTTC ACCGCCGGATTG ATGTTTGCTATTAAG TERM 3091 2898068 - 2898042 - G 75 -11.7 -2.73994 | gap 1, opp_overlap 2898042 2898041 2898039, overlap 2898045 2898046 ACCGGGCTAATATGA CAAT-CGGCGGT TTTC ACCGCCGGATTG ATGTTTGCTATTAAG TERM 3092 2898064 - 2898045 - G 71 -9.2 -3.52073 | opp_overlap 2898042 2898041 2898039, overlap 2898042 2898046 GGGCTAATATGACAA TCGGCGGT TTTC ACCGCCGG ATTGATGTTTGCTAT TERM 3093 2898063 - 2898046 - G 81 -12.7 -2.70923 | opp_overlap 2898042 2898041 2898039, overlap 2898045 2898042 GGCTAATATGACAAT CGGCGGT TTTC ACCGCCG GATTGATGTTTGCTA YPTB2451 2898674 - 2898099 - | putative lipoprotein TERM 3094 2898746 - 2898734 - R 78 -10.5 -3.34428 | overlap 2898732 2898730 2898728 AAAAATAAATAGAGA CGCGC ACT GCGCG CATTAAAATTATTGT ycfL 2899104 - 2898715 - | putative lipoprotein YPTB2453 2899492 - 2899139 - | purine nucleoside phosphoramidase aroE 2900484 - 2899666 - | shikimate 5-dehydrogenase YPTB2455 2900644 - 2900910 + | putative phage replication protein gene fragment YPTB2456 2901382 - 2901567 + | hypothetical protein YPTB2457 2902217 - 2901687 - | hypothetical protein YPTB2458 2903445 - 2902330 - | hypothetical protein TERM 3095 2902863 - 2902887 + g 80 -6.6 -4.80853 | gap 1 CCTTATCAAGGTATT CTAATTG-TGC CTCA GCATCAATTAG TTCTTTTTTTGAAAT YPTB2459 2905096 - 2903918 - | hypothetical protein YPTB2460 2906083 - 2905610 - | putative capsid portal protein YPTB2461 2906112 - 2906390 + | hypothetical protein YPTB2462 2906975 - 2907220 + | hypothetical protein TERM 3096 2907733 - 2907750 + T 74 -6.9 -4.35116 | opp_overlap 2907734, overlap 2907734 GAAACACACAAAAAA AGGAGGC TTTC GCCTCCC TTTTGCTCTCCCCTA TERM 3097 2907734 - 2907749 + T 77 -10.4 -3.20588 | opp_overlap 2907734, overlap 2907733 AAACACACAAAAAAA GGAGGC TTTC GCCTCC CTTTTGCTCTCCCCT TERM 3098 2907749 - 2907734 - T 100 -10.4 -5.82281 | opp_overlap 2907733 2907734 AAACACACAAAAAAA GGAGGC TTTC GCCTCC CTTTTGCTCTCCCCT ptsG 2909206 - 2907773 - | glucose-specific PTS system IIBC components TERM 3099 2908527 - 2908542 + g 70 -7.6 -3.85165 | ACCTGACCCGCTGCG TTGGTG TACT CACCAA TTTGCATTTGGAATG TERM 3100 2909410 - 2909384 - R 73 -7.3 -4.15044 | opp_overlap 2909384 2909387 GTTTCTTTCAAGAAA GCACGTAATCC CTCTC GGATTTCGTAC TTTACGTAAAGAAAC YPTB2464 2910321 - 2909512 - | putative metallodependent hydrolase holB 2911358 - 2910336 - | DNA polymerase III subunit delta' TERM 3101 2910896 - 2910883 - G 75 -3.7 -5.17744 | overlap 2910885 2910886 AGATACCAATAAAAA CAGCG GCTA CGCAG TGTAGCCAGCAAGCT TERM 3102 2910906 - 2910885 - G 71 -6.6 -4.20491 | gap 1, overlap 2910883 2910886 ATACCAATAAAAACA GC-GGCTAC GCAGT GTAGCCAGC AAGCTGGCGGGTTGG tdk 2911996 - 2911358 - | thymidylate kinase TERM 3103 2911913 - 2911947 + g 91 -11.4 -4.18762 | gap 1, overlap 2911909 GTTAATCCCTTGGGC CCGCAGCACCGCGAC CACGGT GTCGCGG-GCGGTGG TTTTCCCTGCCCCTT yceG 2913011 - 2911986 - | hypothetical protein TERM 3104 2913187 - 2913161 - R 84 -10.1 -3.8381 | gap 1, opp_overlap 2913170, overlap 2913162 2913177 AGACAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 3105 2913188 - 2913162 - R 72 -10.1 -2.89563 | gap 1, opp_overlap 2913170, overlap 2913161 2913177 GACAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT pabC 2914106 - 2913300 - | 4-amino-4-deoxychorismate lyase TERM 3106 2914443 - 2914415 - R 74 -9.6 -3.24381 | opp_overlap 2914420 2914422, overlap 2914420 ATAAGATGAATTTAA TAAAAGACCCGG AAAAA CCGGGCCTTTTT AGCATCAGAACCTTA TERM 3107 2914438 - 2914420 - R 100 -9.5 -4.72631 | opp_overlap 2914420 2914422, overlap 2914415 ATGAATTTAATAAAA GACCCGG AAAAA CCGGGCC TTTTTAGCATCAGAA TERM 3108 2914420 - 2914438 + r 81 -7.3 -4.62069 | opp_overlap 2914420 2914415, overlap 2914422 ATGAATTTAATAAAA GACCCGG AAAAA CCGGGCC TTTTTAGCATCAGAA fabF 2915710 - 2914469 - | 3-oxoacyl-(acyl carrier protein) synthase II TERM 3109 2915755 - 2915780 + r 86 -11.9 -2.91681 | opp_overlap 2915755 2915756 TTCGGACAAAAAAAA CTTAGGCGGTC GAAT GACCGCCTAAC TATCTAAACTTAAAG TERM 3110 2915780 - 2915755 - R 100 -11.9 -5.93809 | opp_overlap 2915755, overlap 2915756 TTCGGACAAAAAAAA CTTAGGCGGTC GAAT GACCGCCTAAC TATCTAAACTTAAAG TERM 3111 2915779 - 2915756 - R 100 -15.4 -4.15201 | opp_overlap 2915755, overlap 2915755 TCGGACAAAAAAAAC TTAGGCGGTC GAAT GACCGCCTAA CTATCTAAACTTAAA acpP 2916041 - 2915805 - | acyl carrier protein fabG 2916929 - 2916195 - | 3-ketoacyl-(acyl-carrier-protein) reductase fabD 2917872 - 2916943 - | acyl carrier protein S-malonyltransferase fabH 2918860 - 2917910 - | 3-oxoacyl-(acyl carrier protein) synthase III TERM 3112 2918304 - 2918292 - G 74 -9.1 -3.63627 | overlap 2918301 TCTGGATACGGTAAA GCGAG CAA CTCGC CATAACGACCATCAG TERM 3113 2918418 - 2918393 - G 74 -9.9 -3.57263 | gap 1, opp_overlap 2918399, overlap 2918398 AGCGCCATCGCCAAA CAGAATGATCGT ACC ACGATC-TTCTG GATCCAATGCACGGG plsX 2919901 - 2918867 - | putative glycerol-3-phosphate acyltransferase PlsX rpmF 2920102 - 2919935 - | 50S ribosomal protein L32 YPTB2476 2920639 - 2920115 - | hypothetical protein TERM 3114 2920333 - 2920379 + g 75 -11.6 -2.69471 | overlap 2920332 GCTCGTACGCTTCCG GTAATGCTTCAGCCTGCTCATC ATT GACGATCGGGCTGAAACAATAC GTTGTATGAACATGG maf 2920781 - 2921377 + | Maf-like protein TERM 3115 2921454 - 2921432 - T 100 -12.7 -5.09204 | opp_overlap 2921432 2921431 2921430 ACAGTCGAATAAAAA CGGGGCGCA TGCTG TGCACCCCG CCTTTTATGATCATC TERM 3116 2921432 - 2921454 + T 76 -11.2 -2.56836 | opp_overlap 2921432, overlap 2921431 2921430 ACAGTCGAATAAAAA CGGGGCGCAT GCT GTGCACCCCG CCTTTTATGATCATC rluC 2922462 - 2921500 - | 23S rRNA pseudouridylate synthase C TERM 3117 2921746 - 2921763 + g 71 -9.1 -3.53811 | overlap 2921745 GATTTGATGCGTCCG GCCAGTC ACTG GGCTGGC TTTAACCAGCGTGGC TERM 3118 2922027 - 2922013 - G 79 -10 -3.83844 | overlap 2922018 TTTAGCAACCAATAA GACACC CGA GGTGTC ACGGTCTAAACGGTG TERM 3119 2923639 - 2923625 - g 74 -2.7 -5.15634 | opp_overlap 2923631, overlap 2923627 GATGCGATTAAAAAA GCGGC TGAAG GTCGC CCCGCACCCTTCTTA TERM 3120 2925640 - 2925654 + G 75 -7.8 -4.18018 | opp_overlap 2925633 GGCACAATCGGCCAT GCCTCT GGC AGGGGC TTTTGCCTCACCAGA rne 2923037 - 2926729 + | ribonuclease E TERM 3121 2926800 - 2926845 + T 100 -15 -4.62957 | gap 1, overlap 2926791 2926806 2926807 CACTTTCTCTGGCGG TTGACATGGCCTGAGTTCGGT ACTGC ACCGGACTCAGGCCGT-TTAA TTTTACTTTGATTCT YPTB2480 2926893 - 2926777 - | hypothetical protein TERM 3122 2926806 - 2926840 + g 100 -18.7 -4.29472 | overlap 2926791 2926800 2926807 CTCTGGCGGTTGACA TGGCCTGAGTTCGGT ACTGC ACCGGACTCAGGCCG TTTAATTTTACTTTG TERM 3123 2926807 - 2926839 + g 100 -20 -3.16056 | overlap 2926791 2926806 2926800 TCTGGCGGTTGACAT GGCCTGAGTTCGGT ACTGC ACCGGACTCAGGCC GTTTAATTTTACTTT YPTB2481 2927274 - 2926987 - | hypothetical protein pyrC 2927509 - 2928555 + | dihydroorotase dinI 2928868 - 2929113 + | DNA damage-inducible protein I TERM 3124 2929366 - 2929388 + F 84 -5.4 -5.26875 | overlap 2929367 2929382 ACCACAATACCATTT TGCCGGGGAG TCG CTCCTCAGCC TTTTTTGCTTAAAAC TERM 3125 2929367 - 2929387 + F 78 -8.9 -3.75402 | overlap 2929366 2929382 CCACAATACCATTTT GCCGGGGAG TCG CTCCTCAGC CTTTTTTGCTTAAAA TERM 3126 2929566 - 2929545 - f 75 -7.3 -4.371 | TTGAGTATACTAAAA CAGCTCACT CGGT AATGAGCCG CATTGATCCTCGTTA bssS 2929619 - 2929873 + | biofilm formation regulatory protein BssS TERM 3127 2929914 - 2929939 + F 95 -7.7 -5.06816 | gap 1, opp_overlap 2929912 2929914 TATTACCCATAAACA GGCACCAG-TAA ATA TTATCTGGTGTC TTTTTATTAACCACT solA 2930124 - 2931239 + | N-methyltryptophan oxidase YPTB2486 2931506 - 2932090 + | LuxR family regulatory protein TERM 3128 2932603 - 2932642 + T 100 -11.4 -4.37092 | overlap 2932604 TACCCCATTTTCGGT TCCTCAGGGCCGTAGG CCAATTAA CCAGTGGCCCTGAGGG TTTTCTAACCACCGT TERM 3129 2932604 - 2932641 + T 93 -12.7 -3.21934 | overlap 2932603 ACCCCATTTTCGGTT CCTCAGGGCCGTAGG CCAATTAA CCAGTGGCCCTGAGG GTTTTCTAACCACCG tqsA 2933720 - 2932662 - | putative transport protein YPTB2488 2934936 - 2933869 - | hypothetical protein YPTB2489 2935699 - 2935295 - | hypothetical protein htrB 2936394 - 2937314 + | lipid A biosynthesis lauroyl acyltransferase TERM 3130 2937813 - 2937781 - f 71 -6.6 -4.23529 | gap 1, opp_overlap 2937792 ACACTAAGATATAAA GATAAAAAATGCGAT GAAT ATCG-ACTTTTTATC TCAAAATAAGATATA TERM 3131 2939356 - 2939389 + G 70 -8.1 -3.95584 | gap 1, overlap 2939357 2939380 TGATGGGGCTTTGGT TCTGC-GCCAGTTCGC TTG GCAACCTGGCCGCAGG TTTGATTGGTGGCCA yceE 2938011 - 2939549 + | putative proton dependent di-tripeptide transporter TERM 3132 2939746 - 2939730 - T 100 -9.4 -5.03314 | GTTATCTGTAAAAAA CCAGCC CTTGT GGCTGG TTCAGATTACTGACA YPTB2492 2940128 - 2939796 - | hypothetical protein TERM 3133 2940131 - 2940106 - G 75 -6.1 -4.55491 | gap 1, overlap 2940101 GATTTAATGATAAAA CGGGCAATACGC CAC GCGC-TCACCCG TTTTTATAACCTGCT mdoH 2942770 - 2940161 - | glucosyltransferase MdoH mdoG 2944349 - 2942763 - | glucan biosynthesis protein G TERM 3134 2943852 - 2943863 + g 89 -5.8 -5.25803 | GGCACCGAGCATACT GACG ATTT CGTC TTTTTTATCAGCCTT TERM 3135 2945337 - 2945348 + H 100 -5.8 -5.9873 | ACCTTTCTTTATTCT CGGT GCTT ACCG TTTTTTTTATCCTCA TERM 3136 2945720 - 2945740 + H 79 -6.9 -4.67692 | opp_overlap 2945720, overlap 2945709 TTTTCAGGACAACTA TCCTGTTAA GTT TTATCAGGA TTTGTTTCATTTTCA YPTB2496 2945778 - 2946023 + | hypothetical protein TERM 3137 2947498 - 2947518 + G 71 -8.3 -3.72576 | overlap 2947501 CTGGTATCACTACTT TTACAGGGT ACC ACCCTGTCA TTTGCTGCCCGCAAA TERM 3138 2947977 - 2947987 + G 71 -8.2 -3.71848 | TTTATACCTCTTTGG CGGG GAA CCCG TTATTGGTGACCAAA YPTB2497 2946367 - 2948094 + | potassium/proton antiporter TERM 3139 2948103 - 2948131 + T 73 -8.3 -3.68366 | gap 1, overlap 2948099 GGCGTAATCTCTTTA TTCACTGACGCG ATTTCA CG-GTCAGTGAA TTAGTTTTAAACTGC TERM 3140 2948196 - 2948230 + T 72 -10.1 -2.76466 | gap 1, opp_overlap 2948203 2948205, overlap 2948205 2948208 TTTTGTCACTTAATC CGAATGAGAGAGCTGC TCGA GCAGTTCTCTC-TACG TCGATTTAATTTTAT YPTB2498 2949152 - 2948226 - | DMT superfamliy metabolite exporter TERM 3141 2949134 - 2949117 - G 72 -5.7 -4.34866 | ACCGAAGAAGACAAA CTTTTTA CTCG TAAAAAG AGGAGGACTGCGGTC ypsI 2949583 - 2950227 + | N-acylhomoserine lactone synthase YpeI ypsR 2950957 - 2950220 - | quorum-sensing transcriptional activator YpeR TERM 3142 2950410 - 2950422 + g 87 -6.3 -5.0095 | TCATTTTCCCGAGGA GAGAA AAT TTCTC TTTTATTCTCTTTTT TERM 3143 2951235 - 2951262 + r 91 -12.1 -3.47227 | opp_overlap 2951230 GCTCTATGAACTCCG CCATCTGGGTG CATTTA CATCCAGATGG TTGTGATGCTTACCC YPTB2501 2952301 - 2951375 - | LysR family transcriptional regulator TERM 3144 2952797 - 2952774 - g 80 -4.6 -5.06451 | gap 1 TACCATCGGAAAAAA TCAGGATGGAC GAT GTCC-CCCTAA ATCGCTTCCATATAA TERM 3145 2952923 - 2952896 - g 88 -11.4 -3.89336 | opp_overlap 2952891 TTAATTAAACTCAAA CCCATAATGGCA CTTA CACCATTATGGG AGGGATTACTCGGAT YPTB2502 2952749 - 2954107 + | MFS superfamily sugar transporter TERM 3146 2954283 - 2954293 + G 83 -8.2 -4.51699 | overlap 2954263 GCCTCTCCCAGTCAG GGGC ATT GCCC TTTTATCGTCGTTAT YPTB2503 2954154 - 2954657 + | hypothetical protein TERM 3147 2955661 - 2955671 + G 73 -8.2 -3.90762 | GCGCGGGAAGCTCGC CCGC CAA GCGG TATTTTTGCCCCATA YPTB2504 2954668 - 2955687 + | putative oxidoreductase TERM 3148 2955758 - 2955717 - T 71 -9.7 -2.71731 | gap 1 GTGATTCTTTAACTA TTGGCCAGTG-CAACATA AAATCAA TACGTTAACACTGGCCAA AAAGAATCAAAACCA YPTB2505 2956319 - 2955765 - | hypothetical protein YPTB2506 2957334 - 2956330 - | hypothetical protein TERM 3149 2956740 - 2956726 - G 75 -5.7 -4.62872 | ATCAACGGTGAAAAA GGCAA AACCG TTGCC CGCTAAACCTTGTTC YPTB2507 2958302 - 2957352 - | hypothetical protein YPTB2508 2959645 - 2958299 - | hypothetical protein TERM 3150 2959387 - 2959361 - G 71 -9.4 -3.59979 | opp_overlap 2959351 2959354 2959363 CGCTGGCAGGTTAAA CACACTGCTGCC TTT GGCATCACTGTG TGTGAACTTCAATGC YPTB2509 2963091 - 2959801 - | hypothetical protein TERM 3151 2960148 - 2960126 - G 71 -9 -3.54424 | CTGGATTGTCGGAAA GGGGTGCACC GTT GCTGCTCCCC ACTCCAGGTCGCCTG TERM 3152 2960259 - 2960271 + g 75 -7.7 -4.20454 | opp_overlap 2960259 2960258 AATCAACAAAATTAT CTCGA GGT TCGAG TTTGGTTCTTTCTTG TERM 3153 2960401 - 2960412 + g 71 -4.4 -4.67353 | TTTGCAATAAACGGG GATC GCCG GATC TTTTTGAGTCAGTGC YPTB2510 2964074 - 2963088 - | hypothetical protein YPTB2511 2965756 - 2967000 + | putative mechanosensitive ion channel TERM 3154 2967529 - 2967494 - T 86 -12 -3.14132 | opp_overlap 2967487 TGGCTGGTGTACTAA TGGTGCTCTGAAATAT AAAA ATAATTCAGAGCACCG GGGCTACTATTTACA YPTB2512 2968833 - 2967559 - | hypothetical protein TERM 3155 2968432 - 2968454 + g 75 -6.2 -4.59207 | opp_overlap 2968436 TGCACGCCATGTCCA CCAATTTGGC TCC GCCACACTGG TTTTATACTCTTTAT TERM 3156 2968625 - 2968608 - G 79 -3.3 -5.252 | overlap 2968609 GACGTTGATAAAAAA TTGCCGC GCGG GCGACAT CATCAATGGCGGATA YPTB2513 2969987 - 2968872 - | hypothetical protein TERM 3157 2969248 - 2969265 + g 71 -8.5 -3.75332 | opp_overlap 2969251 ATACCGGCGTGCACA TTATCGG CGAC CCGATAA TTTACATTAACAAGT TERM 3158 2969434 - 2969448 + g 91 -4.2 -5.52986 | overlap 2969432 CCAATATTGTTATCG CCGC CTGTCGT GCGG TTTTTTTCGTAGCCT TERM 3159 2969631 - 2969620 - G 75 -3.6 -5.14563 | TGCTTGAGTAAAAAA CCGG TATT CCAG CCCGTATCGCCAAAA TERM 3160 2970047 - 2970062 + r 76 -2.6 -5.38047 | overlap 2970044 2970048 GGGAACTCCACCCAA TCTAAT TGAT ATTAGG TTTTTTCTATAAATC YPTB2514 2971048 - 2970110 - | hypothetical protein YPTB2515 2972130 - 2971075 - | hypothetical protein TERM 3161 2972158 - 2972179 + r 83 -8.7 -4.16943 | opp_overlap 2972157 2972158 TATAAATAGCAATAT CGTGGTGAG TCAT TTCACCGCG TTTTCGAGTATCAAA YPTB2516 2973101 - 2972277 - | sugar ABC transporter, permease protein YPTB2517 2973977 - 2973102 - | sugar ABC transporter, permease protein TERM 3162 2973917 - 2973889 - G 70 -2.5 -4.90778 | gap 1, opp_overlap 2973897, overlap 2973897 GCGAGCCAAATAAAA GGATAAAACCAG AATATG CTGGTAT-ATCC CAGATAAGAGGCCGC TERM 3163 2973910 - 2973897 - G 71 -3.8 -4.71401 | opp_overlap 2973897, overlap 2973889 AATAAAAGGATAAAA CCAG AATATG CTGG TATATCCCAGATAAG YPTB2518 2975372 - 2974086 - | putative ABC type perplasmic sugar-binding protein TERM 3164 2975459 - 2975485 + H 70 -3.7 -4.79451 | opp_overlap 2975459 2975460 2975462, overlap 2975454 2975462 GCGTAATTTCGATAA TGATGTGAAGT ATTTC ACATCTCATCA TTTTATGTTTAACGT YPTB2519 2975644 - 2976684 + | LacI family transcriptional regulator manB 2976701 - 2978089 + | phosphomannomutase TERM 3165 2978162 - 2978129 - f 100 -14.7 -4.93177 | overlap 2978133 TAAAAACTAATAAAA TCAACCTCGCGTTCA TTAT TGAACGCGAGGGTAA ATAGCAGCATATTGT TERM 3166 2978158 - 2978133 - f 100 -17.7 -3.84772 | overlap 2978129 AACTAATAAAATCAA CCTCGCGTTCA TTAT TGAACGCGAGG GTAAATAGCAGCATA mtlK 2978189 - 2979268 + | putative ABC type sugar transporter, ATP-binding subunit YPTB2522 2980063 - 2979533 - | hypothetical protein TERM 3167 2980901 - 2980936 + r 78 -9.2 -3.66018 | gap 1 TCCTTCAGCCGGTTT TGCTCTTTCTCTTTATC AAA GATAGGG-GAAAGGGCA TTGTTGGCATGCTCC TERM 3168 2981547 - 2981594 + r 100 -22.4 -3.18264 | gap 1 TATCGCTAGGCCCAA TGCCGATCAGTTAAGGATC-GGT TGA ACGAGATCCTTAACTGATCGGCA TTGCTGCATAGCAGG TERM 3169 2981658 - 2981626 - R 93 -12.1 -3.58726 | opp_overlap 2981629, overlap 2981629 GTTTTCTATAGACAA TAATTATCCTCCGGC ATA GTCGGGGGATAATTA TTCAAGGTTTAGGAT TERM 3170 2981655 - 2981629 - R 83 -9.4 -3.92996 | opp_overlap 2981629, overlap 2981626 TTCTATAGACAATAA TTATCCTCCGGC ATA GTCGGGGGATAA TTATTCAAGGTTTAG TERM 3171 2981629 - 2981655 + r 100 -13.8 -3.66772 | opp_overlap 2981629 2981626 TTCTATAGACAATAA TTATCCTCCGGC ATA GTCGGGGGATAA TTATTCAAGGTTTAG TERM 3172 2981875 - 2981861 - R 93 -2.8 -5.95539 | TCCTAAACAAAAAAA TACAGC CCA ACCGTA TAAGATAGCTAATAT YPTB2525 2982399 - 2982148 - | hypothetical protein YPTB2526 2983153 - 2982644 - | hypothetical protein TERM 3173 2983160 - 2983172 + r 71 -3.3 -5.02715 | overlap 2983161 CATATCCATATTATT TCACC TTC GGTGC TTTTTGGTTTGGTAT YPTB2527 2990750 - 2983155 - | putative hemolysin TERM 3174 2985235 - 2985277 + g 85 -4.7 -5.47431 | gap 1, opp_overlap 2985247 CCACTGATGCCCAGA CTGACGCCAAC-ACTGCCGC CACT GCTGCTGTTGCTGCCGTCGG TTTTTTGTGTGTTGG TERM 3175 2985762 - 2985777 + g 71 -4.6 -4.59773 | AAGCTGATTCTCCGC CGCCAG AATA CTGACG TTTTTACCGGTCAGA TERM 3176 2989920 - 2989934 + g 74 -9.2 -3.69092 | CACGGTTGGCCGCGG GCTGCC ATC GGCGGC TTTGGCGTTAATGTT YPTB2528 2992593 - 2990905 - | hemolysin activator/exporter YPTB2529 2994213 - 2993248 - | putative dioxygenase beta subunit TERM 3177 2993587 - 2993602 + g 79 -10.4 -3.69395 | ACCGCGTTGTGTTGC CGCCGT TTTA ACGGCG TTATTCAATGATACC TERM 3178 2993990 - 2994014 + g 100 -16.5 -3.53091 | GAATGCTCACTCAGG CGCACCGCTAT TTG GTAGCGGTGCG TTTCAAAAGGAGAAT TERM 3179 2994297 - 2994273 - R 100 -14.3 -3.54951 | TACGCTATCAGAGAA GACCCACAGCG GCT CACTGTGGGCC ATAATAATAGGCTAC YPTB2530 2995433 - 2994309 - | putative dioxygenase alpha subunit YPTB2531 2997016 - 2995550 - | putative transporter TERM 3180 2995766 - 2995746 - G 83 -2.4 -5.57396 | overlap 2995750 AGAATCAATAAAAAA GGCAGCGC AGTGA GCACAACC GTCGTTTTCATGGTA TERM 3181 2996801 - 2996811 + g 71 -4.6 -4.57837 | GACGCTGTATTCCAG TGCC TTC GGCG TTTTTGGCGCAATAT TERM 3182 2997566 - 2997532 - R 78 -10 -3.45031 | overlap 2997527 2997534 TTCTCAAAAAGTTAA TAGGCATTCGTCCGAT TAA AACGGACGCATACCCA AACCCGCCAACGCAG TERM 3183 2997564 - 2997534 - R 78 -10.4 -3.2916 | overlap 2997532 2997527 CTCAAAAAGTTAATA GGCATTCGTCCGAT TAA AACGGACGCATACC CAAACCCGCCAACGC TERM 3184 2997673 - 2997699 + r 72 -10.1 -2.88849 | gap 1, overlap 2997668 2997674 CATCCATGTTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCTCTGCC TERM 3185 2997674 - 2997700 + r 84 -10.1 -3.82218 | gap 1, overlap 2997668 2997673 ATCCATGTTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCTCTGCCT YPTB2532 2998884 - 2997799 - | tartrate dehydrogenase YPTB2533 2998987 - 2999928 + | LysR family transcriptional regulator YPTB2534 3000300 - 3001304 + | LacI family transcriptional regulatory protein YPTB2535 3002429 - 3001437 - | putative ABC sugar (sorbitol) transporter, permease subunit YPTB2536 3003916 - 3002426 - | putative ABC sugar (sorbitol) transporter, ATP-binding subunit YPTB2537 3004890 - 3003973 - | ABC transporter periplasmic sugar-binding protein gutB 3006291 - 3005065 - | putative sorbitol dehydrogenase TERM 3186 3006177 - 3006187 + g 73 -5.4 -4.57569 | overlap 3006171 GTATGGATACAATGT TGAC GTT GTCA TTTTTGAACAAATCA TERM 3187 3006644 - 3006634 - R 86 -6.8 -4.98672 | overlap 3006627 TTCAAAAAGACAAAA CGTC GGT GACG GTGAGAAATAAAAAA YPTB2539 3007601 - 3006939 - | hypothetical protein YPTB2540 3008356 - 3007784 - | hypothetical protein TERM 3188 3008553 - 3008530 - R 100 -11 -4.81685 | AGTAACCATTAAAAA CCCCCAGC AAATCACG GCTGGGGG ATGATAAAAACACGA TERM 3189 3008607 - 3008576 - R 89 -6.6 -5.38321 | AAACACGATAAAAAA CCAAATGGCTATGG CCAG CTACAACCACTTGG CATCACGCGTAAAGG YPTB2541 3009532 - 3008594 - | CDF family Co+2/Zn+2/Cd+2 efflux protein TERM 3190 3008768 - 3008754 - G 71 -4.9 -4.55697 | overlap 3008758 ATCTCGATAAATAAA CCACG GCCAG CGCGG GTGGCATAATGCGAG TERM 3191 3009787 - 3009772 - R 100 -9 -5.82316 | opp_overlap 3009771 3009772 AGCAGGCAAAAAAAA TCCGCT CGAA AGCGGA CTTTTATCAGACACA ompX 3010372 - 3009848 - | outer membrane protein X TERM 3192 3011080 - 3011063 - g 77 -6.9 -4.57837 | ACATGTCGTTAAAAA CGGTGCC ATTA GGCATCG CTGTAGCACTGGAAT TERM 3193 3011417 - 3011428 + G 75 -5.8 -4.57755 | TCTTGCCCATTGCAC TGGC CGTC GCCA TTTTGTCTACTGCAT YPTB2543 3010777 - 3011664 + | threonine and homoserine efflux system YPTB2544 3011680 - 3012177 + | hypothetical protein TERM 3194 3012818 - 3012828 + G 71 -8.2 -3.65991 | overlap 3012817 TGGCTGCGGGCAACG GGGC TAC GCCC TTATCTTGCCCCCCT tam 3012200 - 3012976 + | trans-aconitate 2-methyltransferase dps 3013234 - 3013737 + | DNA starvation/stationary phase protection protein Dps TERM 3195 3013772 - 3013788 + F 76 -10.8 -2.71364 | opp_overlap 3013772 CTATTACGCTGAACA GGGCCG TTAAC CGGCCC TGCTTGCCGCCCTCC TERM 3196 3013788 - 3013772 - f 79 -10.8 -3.04792 | opp_overlap 3013772 CTATTACGCTGAACA GGGCCG TTAAC CGGCCC TGCTTGCCGCCCTCC TERM 3197 3014682 - 3014652 - g 84 -13.4 -2.65354 | opp_overlap 3014649, overlap 3014649 3014648 3014657 CGCAGTTGAAAGCGA CCCAAGGCGAAAAT GCG ATTGTCACCTTGGG CTATGCGTTAAATCC YPTB2547 3014057 - 3015184 + | hypothetical protein glnH 3015753 - 3016496 + | glutamine ABC transporter periplasmic protein glnP 3016531 - 3017187 + | glutamine ABC transporter permease protein TERM 3198 3017506 - 3017496 - g 77 -6.8 -4.63218 | overlap 3017497 TTTGGCCCAACAAAA GTGC GTG GCAC ATCCAAGGAAGAGGC glnQ 3017184 - 3017906 + | glutamine ABC transporter ATP-binding protein TERM 3199 3017985 - 3018013 + T 100 -8.8 -5.26918 | opp_overlap 3017980 3017985 TGGCTAGAAATCACA CTGGCGGACATC TTACT GATACCCGCCAG TTTTTTATAGGCTAT TERM 3200 3018013 - 3017985 - T 95 -13.2 -3.05997 | opp_overlap 3017985, overlap 3017980 TGGCTAGAAATCACA CTGGCGGACATC TTACT GATACCCGCCAG TTTTTTATAGGCTAT YPTB2551 3019438 - 3018134 - | putative chemotactic transducer TERM 3201 3018190 - 3018171 - G 70 -2.1 -4.85599 | TTTACCTGAGAAAAA GTGGTCA TTAATT TCACCAC ATCTTGCATCCCCAC TERM 3202 3018306 - 3018318 + g 74 -6.3 -4.39989 | overlap 3018297 ATCGCGGCGGTAACC CCATT CTG AATGG TTTTAGTCATTTGCT YPTB2552 3020159 - 3019893 - | hypothetical protein YPTB2553 3021233 - 3020223 - | putative SAM-dependent methyltransferase TERM 3203 3021140 - 3021154 + g 91 -4.2 -5.63517 | overlap 3021142 AGCGATGACGATTTC GGGGAT GCA ATCCGC TTTTTTCTTTGGGGA YPTB2554 3021537 - 3021797 + | hypothetical protein TERM 3204 3021963 - 3021941 - T 100 -9.1 -4.78848 | CTTGGAAATACAAAA GCCCATCCG TTCAT CTGATGGGC TCAGACTGCTGACAA TERM 3205 3022052 - 3022026 - T 84 -10.1 -3.82218 | gap 1, opp_overlap 3022035, overlap 3022027 3022042 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 3206 3022053 - 3022027 - T 72 -10.1 -2.88849 | gap 1, opp_overlap 3022035, overlap 3022026 3022042 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT TERM 3207 3022131 - 3022153 + T 100 -9.1 -4.93296 | TTGTCAATAACCTCA GCCCATCCG TTCAT CTGATGGGC TTTTTCTGGTGGTGA ybiB 3023138 - 3022179 - | hypothetical protein menE 3024619 - 3023204 - | O-succinylbenzoic acid--CoA ligase TERM 3208 3023463 - 3023451 - G 73 -3.3 -4.93661 | ACAGGAATAACAAAA GCGTG CTG CACCC CTGAATACTGCAATA menC 3025578 - 3024607 - | O-succinylbenzoate synthase menB 3026435 - 3025578 - | naphthoate synthase TERM 3209 3025875 - 3025898 + g 76 -2.3 -5.24129 | GGCATCATATTGGCG GCACAGGAA CCAAAT TTCCCGCGC TTTTTTCTGGCCGAC YPTB2559 3027267 - 3026449 - | acyl-CoA thioester hydrolase YfbB TERM 3210 3026512 - 3026497 - G 74 -4 -4.84359 | gap 1, overlap 3026499 TGACTGTGACAAAAA TGC-CAG CAC CTGTGCA GCAAAAGCACCGGGA menD 3028967 - 3027264 - | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase menF 3030562 - 3029195 - | menaquinone-specific isochorismate synthase TERM 3211 3029340 - 3029374 + g 74 -9.2 -3.6502 | TGCTGCCCATCGACT CGCGCTGAACGCAGGG CCA CACTGAATTCAGTGCG TTTAAGTGACAAATA YPTB2562 3031751 - 3031107 - | hypothetical protein elaB 3032614 - 3032306 - | hypothetical protein YPTB2564 3033478 - 3033266 - | hypothetical protein edd 3035460 - 3033544 - | phosphogluconate dehydratase TERM 3212 3034039 - 3034055 + g 72 -5.7 -4.4078 | AATAACCTGATGCTC CCGTGGC ACT GCCGAGG TTTTCATTACCGCCC TERM 3213 3034130 - 3034118 - G 73 -3.3 -4.91109 | CCCTGAGCAGAAAAA GGCTG TTC CAGAC TGGCGATCACCGTCG YPTB2566 3035985 - 3035470 - | hypothetical protein YPTB2567 3037331 - 3036015 - | 2-ketogluconate transporter TERM 3214 3036508 - 3036470 - G 90 -10.3 -4.40333 | gap 1, overlap 3036472 3036500 CGGAAATAACATAAA TACCGGCGGTGGTAGCCA CAAA TGGCAAC-ACCGCCAGAA TACCGACGGATGCCA TERM 3215 3036506 - 3036472 - G 93 -12.9 -3.79177 | gap 1, overlap 3036470 3036500 GAAATAACATAAATA CCGGCGGTGGTAGCCA CAAA TGGCAAC-ACCGCCAG AATACCGACGGATGC TERM 3216 3037618 - 3037647 + r 76 -10.8 -2.50195 | overlap 3037617 3037615 ATAATTTTCGATTGA CGCGTCAGATAA ACTTTA TTTTCTGACGCG CTATTACTCATGGAT TERM 3217 3037684 - 3037671 - R 70 -5.3 -4.50058 | CATGGATAACTAAAA TCACT AAAG AGTGA TTGAGGTTATTGACA TERM 3218 3037763 - 3037789 + r 72 -10.1 -2.88849 | gap 1, opp_overlap 3037752, overlap 3037758 3037764 ACATCCATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCTCTGCC TERM 3219 3037764 - 3037790 + r 84 -10.1 -3.82218 | gap 1, opp_overlap 3037752, overlap 3037758 3037763 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCTCTGCCT YPTB2568 3038827 - 3037877 - | D-isomer specific 2-hydroxyacid dehydrogenase family protein TERM 3220 3039061 - 3039044 - R 80 -2.7 -5.44721 | overlap 3039047 ACCATGTTAAAAAAA CATGTTA CCGG TAACGTG ACCAGCTTATCATTG TERM 3221 3039177 - 3039194 + r 72 -9.9 -2.77899 | TGTTATACGTTGGCG TCACCTG TTAA CAGGTGA TAATTGATGAGCCGA TERM 3222 3039287 - 3039259 - R 73 -5.3 -4.72272 | opp_overlap 3039264, overlap 3039264 CGTGGTGATGAAAAA TAACAGGAAACCG AAT CGACTTCCCTTTA GTCTCAGATAGTCCC TERM 3223 3039282 - 3039264 - R 70 -7.4 -3.84027 | opp_overlap 3039264, overlap 3039259 TGATGAAAAATAACA GGAAACCG AAT CGACTTCC CTTTAGTCTCAGATA YPTB2569 3040283 - 3039291 - | LacI family transcriptional regulatory protein TERM 3224 3040419 - 3040438 + H 80 -10.6 -3.5511 | overlap 3040418 CGGCAGTTACACCGT CGGGAGGG GATG CCCGCCCG TATTTCTCAATGGCA YPTB2570 3040769 - 3042073 + | putative lipoprotein TERM 3225 3042698 - 3042672 - f 84 -10.1 -3.82218 | gap 1, opp_overlap 3042681, overlap 3042673 3042688 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 3226 3042699 - 3042673 - f 72 -10.1 -2.88849 | gap 1, opp_overlap 3042681, overlap 3042672 3042688 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT idnO 3042812 - 3043576 + | gluconate 5-dehydrogenase TERM 3227 3043773 - 3043761 - g 100 -9.1 -5.1615 | overlap 3043763 CCAATATCCAAAAAA TGGCC GCC GGCCA GCCACTGAACGATCA idnK 3043625 - 3044161 + | putative thermosensitive gluconokinase YPTB2573 3044239 - 3044706 + | hypothetical protein YPTB2574 3046303 - 3045035 - | hypothetical protein TERM 3228 3046495 - 3046468 - R 100 -14.2 -5.23292 | opp_overlap 3046463 CCAGATAAAACAAAA CCCCCTGTAAGC CGAT ACTCACAGGGGG TAGGGTCTATCTCGA nuoN 3048005 - 3046542 - | NADH dehydrogenase subunit N TERM 3229 3047972 - 3047939 - G 71 -8.9 -3.45849 | TGGACAGCATCACAA CCACCACCGTCAATC CGAC GATCAACAGCGGTAG CATTGCGATCAGTTG nuoM 3049544 - 3048012 - | NADH dehydrogenase subunit M TERM 3230 3049336 - 3049324 - G 71 -9.1 -3.61536 | AATCTAATGCCGAAA CGTGG GAT CCACG GCACATTATAATATG nuoL 3051428 - 3049584 - | NADH dehydrogenase subunit L TERM 3231 3050484 - 3050463 - G 70 -8.1 -3.87815 | gap 1 GCCCAGCGCCAGAAA CATGTAGCCA ATC TGGCT-CATG GTGGAGTACGCCAAC nuoK 3051727 - 3051425 - | NADH dehydrogenase subunit K nuoJ 3052269 - 3051724 - | NADH dehydrogenase subunit J nuoI 3052824 - 3052282 - | NADH dehydrogenase subunit I nuoH 3053816 - 3052839 - | NADH dehydrogenase subunit H nuoG 3056557 - 3053813 - | NADH dehydrogenase subunit G TERM 3232 3054681 - 3054671 - G 71 -8.2 -3.67173 | opp_overlap 3054664, overlap 3054661 ATAAACCTGGAAGAA GCGC TGT GCGC GGCCTTCCTGATTGA nuoF 3058029 - 3056644 - | NADH dehydrogenase I subunit F TERM 3233 3057869 - 3057879 + g 71 -6.8 -4.20883 | TTAACAACATCAGTG GGCA CCA TGCC TTTTAACGCTTTTTC TERM 3234 3057900 - 3057910 + g 88 -8.2 -4.7373 | ACGCTTTTTCTGCCC CGGC ATA GCCG TTTTTGCTGCGATAC nuoE 3058589 - 3058026 - | NADH dehydrogenase subunit E nuoD 3060388 - 3058592 - | bifunctional NADH:ubiquinone oxidoreductase subunit C/D TERM 3235 3060291 - 3060281 - G 77 -8.2 -4.30719 | TGCTTGCACAACAAA GGCC TCA GGCC CAAAACGGTTCGACA nuoB 3061208 - 3060531 - | NADH dehydrogenase subunit B nuoA 3061810 - 3061310 - | NADH dehydrogenase subunit A TERM 3236 3061992 - 3061971 - R 74 -10.3 -2.57211 | overlap 3061970 ACTCCTTTCGATAAC CTTTTGTCA ACTT TGACAAAAG TAACTACACATTAAT TERM 3237 3062136 - 3062148 + r 70 -7.7 -3.65522 | ACTATACCATTGTCT CAGGA ATA TCCTG TTCTTCCACTCAGTA TERM 3238 3062149 - 3062173 + r 78 -2.2 -5.52384 | gap 1, overlap 3062151 CTCAGGAATATCCTG TTCT-TCCACT CAGT AGTGGACAGTA TTTTTTTGATCCAGG TERM 3239 3062457 - 3062440 - R 100 -4.9 -6.32017 | gap 1, opp_overlap 3062440 AATAAATAAAAAAAA CCCCT-TA AAA TACAGGGG CTTGTGATGATGAAT pecT 3063419 - 3062487 - | LysR family transcriptional regulator TERM 3240 3064678 - 3064640 - g 76 -11.6 -2.83403 | opp_overlap 3064640, overlap 3064639 TTTGGGTGATGAAAT GCTGGTGCCCGCACCGGA TTA CCCGCTGTGGACAGCAGC TGTGTCGCTCTCAAG TERM 3241 3064640 - 3064678 + G 74 -10.9 -2.93382 | opp_overlap 3064640 3064639 TTTGGGTGATGAAAT GCTGGTGCCCGCACCGG ATTAC CCGCTGTGGACAGCAGC TGTGTCGCTCTCAAG TERM 3242 3065149 - 3065137 - g 79 -10.5 -3.6608 | AGCATGCGATTCAAA CCGCC TTG GGCGG CTATCAGAGCATTAG aat 3064275 - 3065489 + | aminotransferase AlaT YPTB2590 3065640 - 3066233 + | hypothetical protein TERM 3243 3066236 - 3066263 + T 100 -15.8 -3.28924 | TTCACTGGATTGATC TTTATAGCCTGC TTGT GCAGGCTATAAA TTATGACAAGAGATA YPTB2591 3066591 - 3066280 - | hypothetical protein TERM 3244 3066443 - 3066433 - G 71 -6.8 -4.15222 | ATTTTCGGCAAGAAA CTGC TCA GCAG TCATCGCATGAACAT TERM 3245 3066569 - 3066551 - G 88 -2.5 -5.7946 | TTTTTAATAAAAAAA TTTACAT AAAAA ATGCAAA TATCAGTGTAAATAT TERM 3246 3066671 - 3066653 - R 72 -7.6 -3.89235 | opp_overlap 3066651 3066653 ATCAAACAAAACTAA TGAAATAA ATA TTATTTCA TGTTTATCTATTCTA TERM 3247 3066653 - 3066671 + r 70 -7.6 -3.71649 | opp_overlap 3066653, overlap 3066651 ATCAAACAAAACTAA TGAAATAA ATA TTATTTCA TGTTTATCTATTCTA TERM 3248 3066720 - 3066731 + r 75 -3 -5.14626 | GATTAAGTTTCAGTG CTAA ATAA TTAG TTTTATTTTGATAAT TERM 3249 3066888 - 3066873 - R 75 -10.4 -2.75826 | overlap 3066870 TACGGTAAGAGACGA GGCCCA CGGA TGGGCC AAGTAACGAAGACAG YPTB2592 3068837 - 3066945 - | sodium:sulfate symporter TERM 3250 3069005 - 3068989 - R 100 -9.4 -5.42131 | opp_overlap 3068988 TAACGATACAAAAAA GGTGCC GTCGA GGCACC CTACTATTGGCTTAT YPTB2593 3069725 - 3069069 - | putative phosphatase YPTB2594 3070384 - 3069890 - | hypothetical protein YPTB2595 3071179 - 3070724 - | hypothetical protein TERM 3251 3071065 - 3071046 - G 78 -7.8 -4.37534 | opp_overlap 3071046 3071045 AAACGGATACCAAAA CGGGTCAC TACC GTGACACG ATTCTCGGGGAACAC YPTB2596 3071420 - 3071611 + | hypothetical protein ackA 3071601 - 3072803 + | acetate kinase pta 3072971 - 3075124 + | phosphate acetyltransferase TERM 3252 3075216 - 3075242 + T 72 -10.1 -2.84602 | gap 1, opp_overlap 3075205, overlap 3075211 3075217 ACATCCATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCCCTGCC TERM 3253 3075217 - 3075243 + T 84 -10.1 -3.74872 | gap 1, opp_overlap 3075205, overlap 3075211 3075216 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCCCTGCCT TERM 3254 3075302 - 3075333 + T 79 -10.9 -3.05463 | opp_overlap 3075308, overlap 3075308 GGGTTTGTCAGCAGT CTGAAACGCCAGC CTCTGC GCTGGCGTTTTTG TTACATCAGACACGT TERM 3255 3075308 - 3075327 + T 100 -10.7 -5.10461 | opp_overlap 3075308, overlap 3075302 GTCAGCAGTCTGAAA CGCCAGC CTCTGC GCTGGCG TTTTTGTTACATCAG TERM 3256 3075327 - 3075308 - T 84 -10.7 -3.58343 | opp_overlap 3075308 3075302 GTCAGCAGTCTGAAA CGCCAGC CTCTGC GCTGGCG TTTTTGTTACATCAG TERM 3257 3075367 - 3075353 - T 75 -7.1 -4.26589 | opp_overlap 3075352 3075360 ATCAGACACGTAAAA CAGGG AGCCG CCCTG CATTCTGGGGCGGTT TERM 3258 3075360 - 3075380 + T 87 -8.2 -4.50358 | opp_overlap 3075353, overlap 3075352 ACGTAAAACAGGGAG CCGCCCTG CATTC TGGGGCGG TTTTCCTCTTTAGGT YPTB2599 3076424 - 3075390 - | LacI family transcriptional regulator TERM 3259 3075749 - 3075768 + g 83 -6.4 -4.93296 | TGGCCGCATCAGGCG TGGTGACC GTTT GGTCAGCA TTTTTGTAATGCTCG TERM 3260 3076700 - 3076666 - H 100 -15.2 -3.9712 | opp_overlap 3076690, overlap 3076684 3076685 TCATGGCATGACAAA TGATAGCGCTATCACA AAT TTTGATAGCGCTACCA GATAGCGCTATCAAT TERM 3261 3076716 - 3076684 - H 77 -8.5 -3.96624 | opp_overlap 3076690, overlap 3076666 3076685 TAGCGCTATCACAAA TTTTGATAGCGCTAC CAG ATAGCGCTATCAATT GAGATCCAGATCACA TERM 3262 3076715 - 3076685 - H 86 -12 -2.97653 | opp_overlap 3076690, overlap 3076666 3076684 AGCGCTATCACAAAT TTTGATAGCGCTAC CAG ATAGCGCTATCAAT TGAGATCCAGATCAC TERM 3263 3076690 - 3076710 + H 70 -9.8 -2.53876 | opp_overlap 3076666 3076685 3076684 TATCACAAATTTTGA TAGCGCTA CCAGA TAGCGCTA TCAATTGAGATCCAG YPTB2600 3076791 - 3077234 + | PTS system, IIA component, mannitol permease YPTB2601 3077403 - 3077690 + | PTS system, IIB component, mannitol or pentitol permease ulaA 3077703 - 3078959 + | ascorbate-specific PTS system enzyme IIC TERM 3264 3078990 - 3079007 + T 100 -12.7 -3.62572 | AAGACGTCACCATCA CCCCCTC CTTG GAGGGGG TTTAAACTGATAATA TERM 3265 3079028 - 3079052 + T 100 -6.4 -5.7946 | opp_overlap 3079028 ACTGATAATAAAAAA CCAAAGCACT TTAGC GGGGCTTTGG TTTTTTTATTGAGCA TERM 3266 3079052 - 3079028 - T 90 -5.7 -5.56673 | opp_overlap 3079028 ACTGATAATAAAAAA CCAAAGCAC TTTAGCG GGGCTTTGG TTTTTTTATTGAGCA YPTB2603 3079624 - 3079076 - | hypothetical protein YPTB2604 3080397 - 3079846 - | phosphodiesterase TERM 3267 3080353 - 3080343 - G 71 -6.8 -4.15543 | overlap 3080345 CAAAGATCGCCAAAA CACG TTC CGTG GCCGGTAACGAACCA YPTB2605 3081283 - 3080585 - | hypothetical protein TERM 3268 3081411 - 3081423 + H 100 -4.1 -6.47325 | GTTGAGCGGTTTATT GAGTC CCT GATTC TTTTTTTTATTTTTT YPTB2606 3081631 - 3082539 + | hypothetical protein hisP 3083460 - 3082663 - | histidine/lysine/arginine/ornithine transporter subunit hisM 3084190 - 3083474 - | ABC histidine transporter, permease subunit HisM TERM 3269 3083922 - 3083904 - G 80 -3.1 -5.42259 | CCACTGCGAAAAAAA GCATTGA GCAGA TCATTGC CTCGGATTATCTCCA hisQ 3084873 - 3084187 - | ABC histidine transporter, permease subunit HisQ TERM 3270 3084499 - 3084487 - G 85 -10.5 -4.21922 | opp_overlap 3084484 3084487 GGAGGTAAAACCAAA GGCCG TCG CGGCC TCAATTTGCCCTTTA hisJ 3085751 - 3084969 - | ABC tranporter, periplasmic histidine-binding protein hisJ TERM 3271 3086112 - 3086083 - R 90 -7.1 -5.18995 | overlap 3086084 AACAGAATACAAAAA CCCTACTACAGCA CCAT CGCTGTTGCAGGA TCATTGTGGAGCATA TERM 3272 3086111 - 3086084 - R 73 -8.4 -3.68957 | overlap 3086083 ACAGAATACAAAAAC CCTACTACAGCA CCAT CGCTGTTGCAGG ATCATTGTGGAGCAT ubiX 3086866 - 3086294 - | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase TERM 3273 3087006 - 3087035 + r 77 -6.5 -4.71382 | gap 2, opp_overlap 3087006 CACCATGAATAAAAA GGTGCA-CC-GCG CCTAAA CGCAGGTTGCACC TTTTTGGCTCATTCT TERM 3274 3087035 - 3087006 - R 90 -7.2 -5.15167 | gap 2, opp_overlap 3087006 CACCATGAATAAAAA GGTGC-ACC-GCGC CTAA ACGCAGGTTGCACC TTTTTGGCTCATTCT purF 3088630 - 3087113 - | amidophosphoribosyltransferase cvpA 3089152 - 3088643 - | colicin V production protein TERM 3275 3088961 - 3088951 - G 80 -6.8 -4.71426 | opp_overlap 3088950 TCGCGATGAACAAAA TGCC GAT GGCA ATTCCGTTGCGAACA dedD 3090186 - 3089464 - | hypothetical protein TERM 3276 3089706 - 3089718 + g 80 -4.7 -5.06414 | opp_overlap 3089702, overlap 3089705 GGACAACATAAGCCT GCCCC ACT GGCGC TTTTTCTTCCACCGG TERM 3277 3089763 - 3089784 + g 82 -5.1 -5.05113 | GCTTAGGTTTCACTT CCAGCGG TTTTTTCT CTGCTGG TTTTGTTTCTATCGG folC 3091610 - 3090306 - | bifunctional folylpolyglutamate synthase/ dihydrofolate synthase TERM 3278 3091586 - 3091562 - G 95 -13.5 -3.93262 | opp_overlap 3091554 3091549 GCTCAAGATAGCAAA GCCACGCGGCC AAA GGCGACGTGGC TTGGGGAGTTTGATG TERM 3279 3091849 - 3091821 - R 76 -10.4 -2.90804 | gap 1, opp_overlap 3091821, overlap 3091820 ATAAGGCACAATAAC CGGGCACCA-TCT TACA AGAGTGATGCCCG TTGAGTTAATCAGAC accD 3092773 - 3091859 - | acetyl-CoA carboxylase subunit beta TERM 3280 3092025 - 3092047 + g 71 -4.9 -4.56775 | gap 2, opp_overlap 3092025, overlap 3092024 TCAATCAGAAACTCA CTGC-G-CTGG AAG CCAGGCGGCAG TTTTTCGCGCACGGT TERM 3281 3092894 - 3092858 - R 78 -2.2 -5.4505 | gap 1, overlap 3092869 3092871 CTCTCCAATAAAAAA TGCCTGAGATACA-CGC CAGT GCGACGTGGCTAAGGCA CCGAAACTTGGATTG dedA 3093666 - 3093004 - | hypothetical protein TERM 3282 3093868 - 3093847 - R 73 -5.1 -4.58395 | overlap 3093853 GTCATCCGCCAAAAA CAAAGGCCC CATA GGAACTTTG GGTAACGCGAAGTGG truA 3094722 - 3093823 - | tRNA pseudouridine synthase A TERM 3283 3094619 - 3094635 + g 87 -6.5 -5.1356 | opp_overlap 3094619 AACGCAATTTTCAAA CCGGC CACTTCT GCCGG TTTTTCTTGCTGAGC asd 3095732 - 3094722 - | putative semialdehyde dehydrogenase TERM 3284 3094858 - 3094894 + g 76 -10.7 -3.11459 | opp_overlap 3094858 3094856 CGAACGCAACCAATA CTCAGGGCATCGCTGCC GGA GGCGTCGCTGACCTGGG TTGGATAATCATCTT TERM 3285 3095840 - 3095862 + r 80 -9.1 -4.0257 | opp_overlap 3095842, overlap 3095832 3095842 ACGTTATTGAACAGC AAGGGCGGT AACAC ACCGCCCTG TTATTAATTTTTACG TERM 3286 3095842 - 3095860 + r 90 -11.7 -3.58785 | opp_overlap 3095842, overlap 3095840 3095832 GTTATTGAACAGCAA GGGCGGT AACAC ACCGCCC TGTTATTAATTTTTA TERM 3287 3095860 - 3095842 - R 95 -12.4 -3.38072 | opp_overlap 3095840 3095832 3095842 GTTATTGAACAGCAA GGGCGGTA ACA CACCGCCC TGTTATTAATTTTTA pdxB 3097089 - 3095902 - | erythronate-4-phosphate dehydrogenase YPTB2621 3097861 - 3097076 - | AraC family transcriptional regulator YPTB2622 3098045 - 3098962 + | DMT superfamily drug/metabolite efflux protein flk 3099247 - 3100284 + | flagella biosynthesis regulator TERM 3288 3100386 - 3100357 - T 93 -10.9 -4.22132 | opp_overlap 3100363, overlap 3100363 TTAAATACAAAAATA CAAAAAGCGACTA ATAT CAGTCGCTTTTTA ACAAACCGCTTACGC TERM 3289 3100380 - 3100363 - T 100 -7.7 -5.38398 | opp_overlap 3100363, overlap 3100357 ACAAAAATACAAAAA GCGACTA ATAT CAGTCGC TTTTTAACAAACCGC TERM 3290 3100363 - 3100380 + T 76 -7 -4.56597 | opp_overlap 3100363 3100357 ACAAAAATACAAAAA GCGACT AATATC AGTCGC TTTTTAACAAACCGC TERM 3291 3100600 - 3100554 - T 75 -10.5 -2.87564 | gap 1, opp_overlap 3100566 3100587 3100593, overlap 3100540 3100566 TCATTCTTTTATACA GCATATAAAAAAGCATGCAGAA TATC TTCCACATGCTTTTTT-TAAGC AATTTAGACAGCTTA TERM 3292 3100589 - 3100566 - T 100 -8.2 -5.40625 | opp_overlap 3100566 3100587, overlap 3100540 3100554 ACAGCATATAAAAAA GCATGCAGAA TATC TTCCACATGC TTTTTTTAAGCAATT TERM 3293 3100566 - 3100589 + T 84 -3.8 -5.41746 | opp_overlap 3100540 3100566 3100554, overlap 3100587 ACAGCATATAAAAAA GCATGCAGAA TATC TTCCACATGC TTTTTTTAAGCAATT smfA 3101156 - 3100626 - | fimbrial protein TERM 3294 3101870 - 3101909 + H 72 -9.2 -3.14344 | gap 1 TCACTTATAACGTGG GGGC-GCTGTCGCCCTTCA AGA TGCAGGGAGTTAGCTGCCC TTGCTCACCCCAGTC YPTB2625 3101944 - 3102639 + | putative aspartate/glutamate racemase TERM 3295 3102812 - 3102793 - T 100 -12.2 -5.24003 | AATAAAAAGTAAAAA GCCTACGA TCTC TCGTAGGC TTCAGACTGCTGACA TERM 3296 3102902 - 3102876 - T 84 -10.1 -3.82218 | gap 1, opp_overlap 3102885, overlap 3102877 3102892 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 3297 3102903 - 3102877 - T 72 -10.1 -2.88849 | gap 1, opp_overlap 3102885, overlap 3102876 3102892 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT TERM 3298 3103007 - 3102976 - T 90 -11.6 -3.62046 | opp_overlap 3102982 GCACTTTGTCAATAA CCTCAAGCCTACGA TCTC TCGTAGGCTTTGGG GAGTAAATCTGAATC TERM 3299 3102982 - 3103001 + T 91 -12.2 -3.55761 | opp_overlap 3102976 TGTCAATAACCTCAA GCCTACGA TCTC TCGTAGGC TTTGGGGAGTAAATC fabB 3104270 - 3103047 - | 3-oxoacyl-(acyl carrier protein) synthase I mnmC 3104442 - 3106511 + | 5-methylaminomethyl-2-thiouridine methyltransferase YPTB2628 3107091 - 3106813 - | hypothetical protein YPTB2629 3107691 - 3107149 - | hypothetical protein TERM 3300 3107569 - 3107556 - G 80 -6.7 -4.77438 | overlap 3107559 AGCCATGAGCAAAAA TCACC CGAT GGTGA GGAGATTCTTCATCG TERM 3301 3107745 - 3107717 - R 82 -10.3 -3.66883 | GTAAGAGAGGGTAAA CACCGCTAAAGTC ACC GTATTTAGCGGTG GTGGGTGCCTAAATT yfcA 3108597 - 3107791 - | hypothetical protein TERM 3302 3108513 - 3108483 - G 74 -11.1 -3.04263 | gap 1, overlap 3108502 ATCCCACCGCTAACA GTGCGGGGACGGTT AACA AGCCGCCCCCGC-C GGCAATGGAATCAAT mepA 3109389 - 3108601 - | penicillin-insensitive murein endopeptidase TERM 3303 3109302 - 3109280 - G 71 -9.1 -3.57462 | GACTCGAGCGGCAAA GGCTGCGCG CCAAT CACGCAACC ATTAGCAAAGCCACC aroC 3110519 - 3109434 - | chorismate synthase YPTB2633 3111597 - 3110596 - | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase YPTB2634 3111817 - 3112428 + | hypothetical protein TERM 3304 3112804 - 3112785 - T 100 -15 -3.8579 | AGCCAATAAGCGAAA GCGCGGCA AGAA TGCCGCGC CAGTTAGACGTTGAT sixA 3113364 - 3112873 - | phosphohistidine phosphatase fadJ 3116305 - 3113963 - | multifunctional fatty acid oxidation complex subunit alpha TERM 3305 3114739 - 3114756 + g 73 -7 -4.21827 | AGAACCCAGCGCGAT CAGCCA CCACAA TGGCTG TTTTACCCTGTTTCC TERM 3306 3114906 - 3114881 - G 74 -11.2 -2.78813 | overlap 3114866 3114864 3114880 3114904 GTGCAGGCCAATAAC CTGCTCTGGC CGTTGT GCCAAAGCAG CAATCTGGCTGATGG TERM 3307 3115466 - 3115485 + g 71 -6.3 -4.20106 | overlap 3115484 AATAATACGTTCAGC CGCCGGG TAGTGC CCCCGCG TTTTAGCTAACGTTT TERM 3308 3115484 - 3115497 + g 79 -2.4 -5.40072 | overlap 3115466 CGGGTAGTGCCCCCG CGTT TTAGCT AACG TTTTTTTACGGACAA fadI 3117615 - 3116305 - | 3-ketoacyl-CoA thiolase TERM 3309 3116538 - 3116567 + g 76 -9.3 -3.85698 | opp_overlap 3116537 3116535 CGCGAGCAAAAGTAT CACTGGCAAACAT TTTC AGGTTAGCCAGTG TTTGTGCGGCGAAGG TERM 3310 3117679 - 3117667 - R 79 -7.7 -4.34559 | AAAGATAACAAATAA CAGGT CTG ACCTG ATCCGAACATTGTTA TERM 3311 3117845 - 3117865 + r 93 -12.6 -3.18239 | opp_overlap 3117845 CATCTAAAGTAATAA CGCGAAGC AAAAG GCTTCGCG TTGGTCAGGTATGTG TERM 3312 3117865 - 3117845 - R 100 -12.6 -3.90425 | opp_overlap 3117845 CATCTAAAGTAATAA CGCGAAGC AAAAG GCTTCGCG TTGGTCAGGTATGTG YPTB2638 3118198 - 3117902 - | hypothetical protein fadL 3118612 - 3119877 + | long-chain fatty acid outer membrane transporter TERM 3313 3119905 - 3119932 + T 100 -17.2 -4.18018 | opp_overlap 3119905 3119907 3119912, overlap 3119912 CATCACCTTATCCAA TAGAAAAGCGCC TGAT GGCGCTTTTCTA TTTTGAATACGGCGG TERM 3314 3119932 - 3119905 - T 100 -17.2 -3.07113 | opp_overlap 3119905 3119912, overlap 3119907 3119912 CATCACCTTATCCAA TAGAAAAGCGCC TGAT GGCGCTTTTCTA TTTTGAATACGGCGG TERM 3315 3119930 - 3119907 - T 100 -15.4 -3.09327 | opp_overlap 3119905 3119912, overlap 3119905 3119912 TCACCTTATCCAATA GAAAAGCGCC TGAT GGCGCTTTTC TATTTTGAATACGGC TERM 3316 3119912 - 3119925 + T 100 -9.5 -4.90471 | opp_overlap 3119907 3119905 3119912, overlap 3119905 TTATCCAATAGAAAA GCGCC TGAT GGCGC TTTTCTATTTTGAAT TERM 3317 3119925 - 3119912 - T 100 -9.5 -4.68724 | opp_overlap 3119912 3119905, overlap 3119907 3119905 TTATCCAATAGAAAA GCGCC TGAT GGCGC TTTTCTATTTTGAAT vcaJ 3120748 - 3119984 - | VacJ lipoprotein TERM 3318 3120774 - 3120791 + r 78 -5.6 -4.88895 | ATGAAAGTCTGTCTA TCCCTT TCACTT AAGGGA TTTGTTTATTTATTT YPTB2641 3122010 - 3120784 - | putative cytochrome c-type biogenesis protein ccmH 3122522 - 3122010 - | putative cytochrome c-type biogenesis protein ccmG 3123085 - 3122519 - | thiol:disulfide interchange protein DsbE ccmF 3125052 - 3123082 - | putative cytochrome c-type biogenesis protein TERM 3319 3123992 - 3123978 - G 71 -8.6 -3.62046 | GCATTGCGGCAATAA GCAACA CAT TGTTGC CGAGCAGGAAAGTCT TERM 3320 3124035 - 3124053 + g 73 -8.1 -4.09685 | gap 1 CTTCATGCTGAGTCC GGCTGCGC ACCT GCGC-GCC TTTTACCGCATACAG ccmE 3125543 - 3125049 - | cytochrome c-type biogenesis protein CcmE ccmD 3125890 - 3125540 - | putative heme exporter protein D TERM 3321 3125848 - 3125837 - G 75 -5.8 -4.61868 | overlap 3125839 GAGCCAGACATAAAA GGCA TAGT TGCC CATGGCAAAAAATTC ccmC 3126624 - 3125887 - | putative ABC type heme exporter, permease subunit ccmC ccmB 3127346 - 3126687 - | ABC type heme exporter, permease subunit ccmB ccmA 3127972 - 3127316 - | cytochrome c biogenesis protein CcmA TERM 3322 3127943 - 3127929 - GR 73 -5.6 -4.42464 | overlap 3127931 AACTGCTGAAATAAA CAGCGA TCA TCGCGG ATACAGGTCAGATTT YPTB2650 3128884 - 3128417 - | hypothetical protein TERM 3323 3129173 - 3129187 + H 74 -7.8 -3.91364 | opp_overlap 3129170 3129173 TCGAACCAGTAACTA GCCCTT AGG AGGGGC TTGTTATATCCGTTT lemA 3129501 - 3130043 + | hypothetical protein TERM 3324 3131133 - 3131115 - gf 73 -2.4 -5.04265 | AAAAAAGAGTAAAAA CAAAAGCC CAT GGGTTTTA AACAGCCGCGATGAA YPTB2652 3129988 - 3132087 + | hypothetical protein TERM 3325 3132396 - 3132380 - f 80 -3.7 -5.38326 | TTAATTAAATAAAAA GTGTAAA ATG TATACAC ATCAATACAGTAACC YPTB2653 3132463 - 3132804 + | hypothetical protein TERM 3326 3132814 - 3132842 + T 78 -8.9 -3.83921 | opp_overlap 3132813 3132814 AGCTAATGCATTAAT GGGTTCTTTGC CACCCAA GCAGAGAGCCC TTCTATTATCTTGGA YPTB2654 3133244 - 3132879 - | hypothetical protein YPTB2655 3133730 - 3133251 - | hypothetical protein TERM 3327 3133704 - 3133715 + g 88 -2.2 -5.80951 | overlap 3133706 ACGCTCTAACAACGC CGGT AAAA ACTG TTTTTTCTTTTCCAT YPTB2656 3134601 - 3133795 - | hypothetical protein YPTB2657 3135469 - 3134621 - | hypothetical protein YPTB2658 3135729 - 3135469 - | hypothetical protein TERM 3328 3135774 - 3135808 + r 89 -11.4 -3.44377 | opp_overlap 3135772 3135770 3135768 3135766, overlap 3135773 GAAAAATCAGAGACC GCATGCTCTACGTGTG TTT CCCACGCAGAACATGC TTACCTTTTATCTAT YPTB2659 3138721 - 3135809 - | hypothetical protein TERM 3329 3135927 - 3135937 + g 73 -8.2 -3.9122 | overlap 3135913 3135930 CGGTGCCGTGGTTTC CGGC GGT GCCG TTGTTTCCGGCGGTG TERM 3330 3135930 - 3135955 + g 76 -8.9 -3.9122 | overlap 3135913 3135927 3135948 TGCCGTGGTTTCCGG CGGTGCCGTTG TTTC CGGCGGTGCCG TTGTTTCCGGCGGTG TERM 3331 3135948 - 3135973 + g 71 -8.9 -3.59202 | overlap 3135930 3135966 TGCCGTTGTTTCCGG CGGTGCCGTTG TTTC CGGCGGTGCCG TTGTCTCTGGCGGTG TERM 3332 3136002 - 3136027 + g 71 -8.9 -3.59202 | overlap 3135984 3136020 TGCCGTTGTCTCTGG CGGTGCCGTTG TTTC CGGCGGTGCCG TTGTCTCTGGCGGTG TERM 3333 3136163 - 3136173 + g 73 -8.2 -3.9122 | overlap 3136149 3136163 3136166 CGGTGCCGTGGTTTC CGGC GGT GCCG TTGTTTCCGGCGGTG TERM 3334 3136199 - 3136209 + g 73 -8.2 -3.9122 | overlap 3136202 CGGTGCCGTGGTTTC CGGC GGT GCCG TTGTTTCCGGCGGTG TERM 3335 3136202 - 3136227 + g 76 -8.9 -3.9122 | overlap 3136199 3136220 TGCCGTGGTTTCCGG CGGTGCCGTTG TTTC CGGCGGTGCCG TTGTTTCCGGCGGTG TERM 3336 3136220 - 3136245 + g 78 -8.9 -4.07133 | overlap 3136202 3136238 TGCCGTTGTTTCCGG CGGTGCCGTTG TTTC CGGCGGTGCCG TTGTTTCTGGCGGTG TERM 3337 3136256 - 3136281 + g 71 -8.9 -3.59202 | overlap 3136238 3136274 TGCCGTTGTTTCTGG CGGTGCCGTTG TTTC CGGCGGTGCCG TTGTCTCTGGCGGTG TERM 3338 3136469 - 3136479 + g 73 -8.2 -3.9122 | overlap 3136467 3136472 3136472 CGGTGCCGTGGTTTC CGGC GGT GCCG TTGTTTCCGGCGGTA YPTB2660 3142842 - 3139015 - | hypothetical protein TERM 3339 3139235 - 3139249 + g 73 -10 -3.36492 | opp_overlap 3139233 CGAAAAAGAATATCG GGCATC GCG GATGCC TTCTGGCGTTGGGCC TERM 3340 3139714 - 3139725 + g 71 -4.4 -4.69559 | AATCGCTTTGGACGT GTGA GTAA TCAC TTTATTTTCAAATTT TERM 3341 3140043 - 3140070 + g 82 -5.6 -5.05782 | overlap 3140049 CTTTAATCAGTTTAT TTTCACGAAACG CGAT CGTTTCTTGTAA TTTTTTAGCCTGGCT TERM 3342 3140049 - 3140064 + g 70 -7.6 -3.81575 | overlap 3140043 TCAGTTTATTTTCAC GAAACG CGAT CGTTTC TTGTAATTTTTTAGC TERM 3343 3141078 - 3141113 + g 73 -7 -4.14739 | gap 1, opp_overlap 3141089 GTAACTGCTGTGTCG CGTTCAATAACGCAGGT AAG ATCTGC-TCATTGGACG TTTTGGCATAACTCA TERM 3344 3142442 - 3142456 + g 77 -6.4 -4.58663 | opp_overlap 3142442 TGCTTAATGAAGTTA TCCAGT AAC GCTGGA TTTTTCGCCAATGCT TERM 3345 3142643 - 3142633 - G 76 -8.2 -4.05446 | overlap 3142634 GGCGGCAATGACAAA GCGC GGT GCGC CGTACCAAAAACCTA YPTB2661 3144227 - 3142851 - | OmpA/MotB family protein TERM 3346 3144200 - 3144184 - G 73 -7.2 -4.25104 | CTGCTTTGATCAAAA GGAGGC ATTGA GCCCCC AAGGTTCAAATCACT YPTB2662 3145573 - 3144224 - | hypothetical protein TERM 3347 3144313 - 3144329 + g 79 -3.6 -5.31456 | opp_overlap 3144310, overlap 3144314 CAGCATTGGAAACCT TGTCCC AGAAG GGGCCA TTTTTTATCAATTCA TERM 3348 3144860 - 3144847 - G 75 -5.3 -4.76041 | CATATTTATTAAAAA TTTGC AGTA GCAAA TAATCGACAATTTCT YPTB2663 3146137 - 3145577 - | hypothetical protein TERM 3349 3146342 - 3146364 + r 100 -13.4 -3.72893 | opp_overlap 3146342 CACTTATTAAGAAAA CCTGCCACCC CAA GGGTGGCAAG TTTGATAGCGACATG TERM 3350 3146364 - 3146342 - R 100 -15.6 -4.72497 | opp_overlap 3146342 CACTTATTAAGAAAA CCTGCCACCC CAA GGGTGGCAAG TTTGATAGCGACATG YPTB2664 3146959 - 3146390 - | hypothetical protein TERM 3351 3146722 - 3146712 - G 78 -5.4 -4.8622 | TGTGCGAAGCAAAAA TCTG AAA CAGA GGCTTTACCTGAACC TERM 3352 3147063 - 3147039 - R 70 -9.5 -2.84955 | ACAACCATTACTACA TCATTCAATAT TGA ATACTGAATGA ATAAAGGTCCCATGC YPTB2665 3148710 - 3147208 - | hypothetical protein TERM 3353 3148426 - 3148440 + g 71 -8.6 -3.75024 | CCCACGCCATGCGCT TTCCAG AGA CTGGAA TTCTTGGTGGTGCAA YPTB2666 3149258 - 3148734 - | hypothetical protein YPTB2667 3149972 - 3149364 - | fimbrial protein YPTB2668 3152668 - 3149957 - | putative outer membrane fimbrial usher porin TERM 3354 3150469 - 3150459 - G 77 -8.2 -4.15565 | TTGATGATGGCAAAA GGCG CAT CGCC AAGTCGTGGGCCCGC YPTB2669 3153518 - 3152757 - | putative pili chaperone protein TERM 3355 3153564 - 3153613 + r 73 -10.1 -2.98493 | gap 1, opp_overlap 3153567 3153571, overlap 3153561 3153567 GCAGACTTATCTTTA TAACAGACTTGCTACCGCAGCG TTTTATC CGCCTCGGCAGCAAG-CTGTTA TGCTTTACTGCTGCG TERM 3356 3153610 - 3153567 - R 89 -11.8 -3.31461 | gap 1, opp_overlap 3153567 3153564 3153561, overlap 3153571 GACTTATCTTTATAA CAGACTTGCTACCGCAGCG TTTTATC CGCCTCGGCAGCAAG-CTG TTATGCTTTACTGCT TERM 3357 3153607 - 3153571 - R 93 -12.3 -3.17622 | opp_overlap 3153567 3153564 3153561, overlap 3153567 TATCTTTATAACAGA CTTGCTACCGCAGCG TTTTATC CGCCTCGGCAGCAAG CTGTTATGCTTTACT YPTB2670 3154220 - 3153675 - | frimbrial protein TERM 3358 3154264 - 3154295 + r 100 -8.2 -5.52096 | opp_overlap 3154262 3154264 GATTTATTAAACATA TAGTTAATATTCGC TCAT GCCAATATTAGCTA TTTTTTATTGCCTTT clpB5 3157088 - 3154431 - | Clp ATPase TERM 3359 3155675 - 3155687 + g 71 -9.1 -3.54424 | overlap 3155681 3155684 TCAACTGCTCAGTAC GCGCA TCC TGCGC TTTACCAAAGTGCCG TERM 3360 3158020 - 3158032 + G 80 -2.7 -5.36441 | ACGTTGAGCGGCTGA TAGAA TCC TTCTG TTTTTTATCTGCCAG YPTB2672 3157872 - 3159752 + | hypothetical protein TERM 3361 3159941 - 3159896 - g 73 -7.5 -4.26076 | gap 1 CCAGCGCCAGGAAAA GCGC-CCTTGCCTGAACAGGAA GCC TTCCGCATCGGGCAAAGTGCGC ACATGACGTTCTCTC TERM 3362 3159956 - 3159977 + G 85 -12.3 -3.28712 | overlap 3159951 CACATGACGTTCTCT CCGCGTGAG ATAT CTCATGCGG TTATGAAAGACGGGA YPTB2673 3159752 - 3160777 + | hypothetical protein TERM 3363 3161623 - 3161603 - g 73 -9.7 -3.29511 | TTGATGCCGCGATAA CCCCGATAG CGC CTATCGTGG TGCCAGAACCTATTG YPTB2674 3160876 - 3162069 + | hypothetical protein TERM 3364 3162283 - 3162271 - g 78 -5.5 -4.85599 | CCTATCCTAGAAAAA GTGGC ACA ACCAC AAGGCTTGGCAGTGA YPTB2675 3162076 - 3163107 + | putative fimbrial protein TERM 3365 3164122 - 3164106 - g 81 -5.7 -4.89233 | CATCAATATTAAAAA CCGGGCG GTG CATCCGG ATGCCGCGGGTGAAA TERM 3366 3164156 - 3164143 - g 88 -2.4 -5.75342 | opp_overlap 3164143 GCGGGTGAAAAAAAA GTGA GCTTCT TCAC TGATCTTCCCACATC YPTB2676 3163147 - 3164484 + | hypothetical protein TERM 3367 3164952 - 3164930 - g 71 -7 -4.07687 | opp_overlap 3164935 ATCCTTGCGCCAAAA TGTCATCGCC ACT GACGATGATA TCGACCCAGAGGAGT YPTB2677 3164481 - 3165182 + | hypothetical protein TERM 3368 3165274 - 3165288 + G 76 -7.2 -4.34912 | opp_overlap 3165273 ATTTTAAGGGAAATG CGTTAT GGA ATAACG TTATTTTCATTACTT TERM 3369 3166158 - 3166137 - g 77 -6.5 -4.64334 | overlap 3166138 3166152 3166153 AAGCCTGCAATAAAA CCACGGGTG AAAA CACCGGTGA TAAAACCTATCCCCG YPTB2678 3165183 - 3166865 + | OMPA family outer membrane porin YPTB2679 3166862 - 3167344 + | hypothetical protein TERM 3370 3167358 - 3167395 + T 83 -12.2 -2.73994 | opp_overlap 3167361, overlap 3167355 AATTTTTGAGCGATA TCACGTCATGCTAAAT AACCCG ACTTAGCATGACGTGG TCGTATTGGCAGAAT TERM 3371 3167392 - 3167361 - T 88 -12.5 -2.64616 | opp_overlap 3167358 3167355 TTTTGAGCGATATCA CGTCATGCTAAAT AACCCG ACTTAGCATGACG TGGTCGTATTGGCAG YPTB2680 3168319 - 3167717 - | LuxR family regulatory protein TERM 3372 3169550 - 3169578 + r 100 -11.7 -4.8083 | opp_overlap 3169550 AAATCGTTAAGAAAA GAGGGCGGCATAA CCC TAATGCGGCCCTC TTTTTCATGCTATTG TERM 3373 3169578 - 3169550 - R 100 -11.7 -4.6635 | opp_overlap 3169550 AAATCGTTAAGAAAA GAGGGCGGCATAA CCC TAATGCGGCCCTC TTTTTCATGCTATTG mltB 3170682 - 3169588 - | membrane-bound lytic murein transglycosylase B; catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N-acetylglucosamine in peptidoglycan TERM 3374 3170590 - 3170573 - G 79 -3.3 -5.26875 | opp_overlap 3170575, overlap 3170574 3170575 GGCTCAAGTAAAAAA CCGCCCT GAAC AGGGCTA TCTGACGGGGTTGCA TERM 3375 3170844 - 3170820 - H 73 -10.1 -3.06133 | opp_overlap 3170824, overlap 3170822 3170824 CAATGGCTGACGCAA TATAGGGCG CGTTTAC CGCCCTATA TCCCCTCACAACATT sfuA 3171011 - 3172030 + | ABC transporter, periplasmic iron(III)-binding protein TERM 3376 3172043 - 3172056 + F 76 -9.5 -3.53091 | TAATCCGTTTTACTC CGCCC CTGC GGGCG TTTAACAAACCGAGT TERM 3377 3172433 - 3172443 + G 74 -6.8 -4.386 | opp_overlap 3172424, overlap 3172430 GCAATAGCACCACTG GCAG TGC CTGC TTTTGTACAAAGTTA TERM 3378 3172491 - 3172505 + G 73 -3.4 -4.99035 | overlap 3172492 TCCCCTCAATGAATG GGCTGG CCG CCGGCG TTTTTATCTCGGTGA TERM 3379 3173452 - 3173464 + G 71 -9.1 -3.50737 | overlap 3173448 TGCTCCCGGCGCCGC TGCGG GTG CCGCA TTAGTCTTTCTGGCT sfuB 3172085 - 3173671 + | iron ABC transporter permease sfuC 3173668 - 3174717 + | ABC iron(III) transporter, ATP-binding subunit YPTB2685 3175314 - 3174790 - | hypothetical protein TERM 3380 3175601 - 3175576 - H 79 -10.7 -3.00986 | overlap 3175573 AACCACATTAAATTA TGTTTTGTTTT AAAA AAAACAAAACA CTCACCATTATAATT YPTB2686 3175775 - 3176260 + | hypothetical protein TERM 3381 3176269 - 3176288 + T 100 -13.6 -4.11346 | opp_overlap 3176265 GTATTAATTTATTCG GGGATGGC CTAC GCCATCCC TTATTATTTACGTGT YPTB2687 3177338 - 3176490 - | hypothetical protein TERM 3382 3177811 - 3177796 - H 89 -6.2 -5.28481 | overlap 3177788 GATTTAATCAAAAAA TTGAGA CTTT TCTCAA GAAAGTGAAGTAGAT TERM 3383 3179562 - 3179552 - g 89 -3.2 -5.63012 | AAAAATAAAGAAAAA CTGG ATA CCAA TATTAAGTTTCTCTG TERM 3384 3179638 - 3179662 + G 71 -4.3 -4.75288 | TAAAACCAATACTAT TTTGCAAGATG AGT CATTGTGCGAA TTTATTTTGGTCTGG dmsA 3178169 - 3180595 + | putative dimethyl sulfoxide reductase chain A protein dmsB 3180607 - 3181224 + | putative dimethyl sulfoxide reductase chain B protein TERM 3385 3181962 - 3181972 + G 71 -4.6 -4.53163 | TCGGTGAATTAGCCG GGCG GAT TGCC TTTTATAATCTCTGG dmsC 3181226 - 3182002 + | putative dimethyl sulfoxide reductase chain C protein TERM 3386 3182038 - 3182057 + F 77 -6.4 -4.60487 | overlap 3182041 TTCCATGTGGTGATT TACCCGCT GATT AGCGGCTA TTTTTGCGGCTAATC YPTB2691 3182484 - 3183080 + | hypothetical protein YPTB2692 3183077 - 3183646 + | putative iron-sulphur protein TERM 3387 3183684 - 3183697 + T 71 -6.7 -4.13767 | ACTGCACCTTATTCA GTTGG GTAT CCAAC TTTTGGGGTGCAGCC YPTB2693 3184548 - 3183892 - | putative lipoprotein TERM 3388 3184287 - 3184297 + g 73 -3.2 -4.93288 | overlap 3184296 TAATATCACCCGCGT TGGT CAT GCCA TTTTGTTTAAATGTT YPTB2694 3184946 - 3184545 - | putative lipoprotein YPTB2695 3185599 - 3184928 - | putative lipoprotein TERM 3389 3186438 - 3186425 - g 73 -4.5 -4.7373 | GGAGGGGATTAAAAA CGGCA TTGC TACCG AGATGGAAGAGCGCC YPTB2696 3186285 - 3186716 + | hypothetical protein YPTB2697 3187335 - 3186811 - | putative B-type cytochrome YPTB2698 3188815 - 3187580 - | aminotransferase TERM 3390 3188275 - 3188244 - G 93 -7.4 -5.40474 | gap 1, opp_overlap 3188249 ACTCGTTCAAAAAAA TCCAACTCAACA-CA TTG CGCTGTTGGGTTGGA TGGAAAACCGAGGAT TERM 3391 3188374 - 3188349 - G 85 -4.7 -5.40474 | AGCTCGCCAAAAAAA TCAATGCCTTC GGTC AACGGCACTGA ACGCACTTGCGCACC TERM 3392 3188860 - 3188878 + H 70 -7.4 -3.88787 | overlap 3188862 3188877 ACCGTCCGAGCGACG CTGACCAT CAG ATGGTCTG TTTATGAACATATCC TERM 3393 3188862 - 3188876 + H 71 -8.6 -3.53174 | overlap 3188860 CGTCCGAGCGACGCT GACCAT CAG ATGGTC TGTTTATGAACATAT TERM 3394 3189325 - 3189315 - g 73 -3.2 -4.91429 | AAAGCGCAAATAAAA CAAC GCG GCTG TTGTGCCATTCTCGG TERM 3395 3189607 - 3189581 - g 71 -9.4 -3.59293 | opp_overlap 3189581, overlap 3189577 GCAAACCGAAAGCAA CGGTAAGCAACA TTT TGATGCTAACCG TGTCGTCACCTATGC YPTB2699 3189081 - 3190328 + | hypothetical protein TERM 3396 3190344 - 3190374 + T 84 -9.8 -3.78934 | opp_overlap 3190346 CCTTCTTCCGCATCA TATCTGCCGGAA CTTATCC TCCCGGCAGATA TTCTTCTGCGCCCAC TERM 3397 3190372 - 3190346 - T 75 -10.2 -2.78384 | opp_overlap 3190344 TTCTTCCGCATCATA TCTGCCGGAA CTTATCC TCCCGGCAGA TATTCTTCTGCGCCC glk 3191377 - 3190406 - | glucokinase TERM 3398 3190853 - 3190867 + g 73 -7.8 -3.98981 | opp_overlap 3190852 CTCCTGGCGCAATAC GGCCAG AAT CTGGTC TTCTTCTTCACTATT YPTB2701 3192034 - 3191558 - | hypothetical protein TERM 3399 3192959 - 3192948 - g 93 -7.2 -5.40072 | overlap 3192950 TTTGGTCGAAAAAAA GCCC ACCG GGGC CTGCTGGCTATTGGC YPTB2702 3192137 - 3193015 + | LysR family transcriptional regulator YPTB2703 3193151 - 3194140 + | putative ion channel protein YPTB2704 3194311 - 3194724 + | hypothetical protein TERM 3400 3194760 - 3194750 - T 71 -6.8 -4.16016 | opp_overlap 3194751 TCATCGCTCAATAAA GCCT GTC AGGC GGGTTTTCATGGAAT mntH 3196046 - 3194817 - | manganese transport protein MntH TERM 3401 3195278 - 3195268 - G 83 -8.2 -4.56914 | overlap 3195269 CCATTGAAATGAAAA GCCG CAG CGGC GGTTGCCATCATCGC TERM 3402 3196131 - 3196145 + H 90 -5.8 -5.5112 | ATCAAGCGCATTTGT GATAAT GGA ATTATC TTTTTTGTTAGTAGA nupC 3196497 - 3197681 + | CNT family H+/nucleoside symporter TERM 3403 3197799 - 3197825 + F 72 -10.1 -2.88849 | gap 1, opp_overlap 3197788, overlap 3197794 3197800 ACATCCATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCTCTGCC TERM 3404 3197800 - 3197826 + F 84 -10.1 -3.82218 | gap 1, opp_overlap 3197788, overlap 3197794 3197799 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCTCTGCCT TERM 3405 3197890 - 3197903 + F 84 -3.7 -5.4492 | TGTCAGCAGTCTGGA GGCGC TACG GCACC TTTTTTGTATCTATA gltX 3199412 - 3200827 + | glutamyl-tRNA synthetase TERM 3406 3200852 - 3200870 + F 100 -12.4 -5.5762 | TTTTCCGTGTTATCA GGCGGCCA CTC TGGTCGCC TTTTTTATATTTGAT TERM 3407 3201293 - 3201321 + F 100 -14.7 -2.74144 | opp_overlap 3201298 3201300, overlap 3201300 AGCTCCACCACCCTT TAAAAGACCGGCC TTT GGCCGGTTTTTTG CTTTACAGCTCCGAC TERM 3408 3201316 - 3201298 - f 91 -10.2 -4.10161 | opp_overlap 3201293 3201300, overlap 3201300 CACCACCCTTTAAAA GACCGGCC TTT GGCCGGTT TTTTGCTTTACAGCT TERM 3409 3201314 - 3201300 - f 100 -12.8 -3.64716 | opp_overlap 3201293 3201300, overlap 3201298 CCACCCTTTAAAAGA CCGGCC TTT GGCCGG TTTTTTGCTTTACAG TERM 3410 3201300 - 3201314 + F 100 -12.8 -5.37593 | opp_overlap 3201300 3201298, overlap 3201293 CCACCCTTTAAAAGA CCGGCC TTT GGCCGG TTTTTTGCTTTACAG TERM 3411 3201578 - 3201589 + G 72 -5.8 -4.44245 | opp_overlap 3201569, overlap 3201576 3201575 ATTAAACCAGTGGTG CCTG GCGG CAGG TTTTGTCCGTAATCT YPTB2708 3201477 - 3202085 + | hypothetical protein TERM 3412 3202422 - 3202411 - g 70 -2.2 -4.99861 | GAGGAATTACAAAAA CAGC AGCA ACTG ATTGAGACCCAAATT YPTB2709 3202234 - 3202581 + | hypothetical protein YPTB2710 3202913 - 3202698 - | hypothetical protein ligA 3204945 - 3202933 - | NAD-dependent DNA ligase LigA TERM 3413 3204161 - 3204143 - G 70 -2.4 -4.91511 | opp_overlap 3204156 ATTTGACGATAAAAA GCAATAAC CTG ATCACTGC CAGTGCAGAGTTTCA TERM 3414 3204985 - 3204969 - R 100 -10.8 -5.5762 | opp_overlap 3204964 ACCAAAGATAAAAAA CCCCCG GCATG CGGGGG TTCGGGTTAATTCGA zipA 3206022 - 3205036 - | cell division protein ZipA TERM 3415 3205536 - 3205548 + g 71 -4.8 -4.59773 | overlap 3205526 GCTGTTGTGGAGCCA CCTG ATGTG CAGG TTTTTCCACATGCGG cysZ 3206271 - 3207005 + | putative sulfate transport protein CysZ TERM 3416 3207017 - 3207035 + F 100 -14.6 -3.97139 | ATGATCATTTTCGGT GGGCGTGT CTA ACACGCCC TTGTTATTGGGATTA TERM 3417 3207371 - 3207353 - g 91 -13.2 -3.41073 | overlap 3207351 GACCGCAGGCAAAGA GCTGGTTG AAC CAACCAGC GGGAATACAGGTGTT cysK 3207162 - 3208130 + | cysteine synthase A TERM 3418 3208185 - 3208150 - f 100 -12 -3.74693 | opp_overlap 3208160, overlap 3208160 GGCTACCGCACTAAA TGCAAAAAAAGCACCC TTTG GGGTGCTTTTTTTGTG GAGTACATCAAAGTT TERM 3419 3208175 - 3208160 - f 100 -10.4 -5.58209 | opp_overlap 3208160, overlap 3208150 CTAAATGCAAAAAAA GCACCC TTTG GGGTGC TTTTTTTGTGGAGTA TERM 3420 3208160 - 3208175 + F 100 -10.4 -5.626 | opp_overlap 3208150 3208160 CTAAATGCAAAAAAA GCACCC TTTG GGGTGC TTTTTTTGTGGAGTA ptsH 3208629 - 3208886 + | phosphohistidinoprotein-hexose phosphotransferase component of PTS system (Hpr) TERM 3421 3210001 - 3209990 - g 81 -5.8 -5.00196 | GCCGAAAGAAGAAAA CCCA TTCC TGGG CTGGCGTGCTATTCG TERM 3422 3210262 - 3210283 + G 72 -10.3 -3.01712 | opp_overlap 3210267, overlap 3210267 TCGCTCGCCATTTAG CTAAAGAAG TTGA CTTCTTTAG TATTGGGACAAACGA ptsI 3208935 - 3210662 + | phosphoenolpyruvate-protein phosphotransferase TERM 3423 3210793 - 3210759 - g 79 -3.5 -5.34555 | opp_overlap 3210761 TCAGATGATAAAAAA GACAGCAGTGTTATT GAGAT AGTTGCACCGCTGTC TGGTGAAATCGTCAA crr 3210711 - 3211220 + | glucose-specific PTS system component TERM 3424 3211278 - 3211261 - T 100 -9.8 -5.29782 | opp_overlap 3211261 GATACCGATAAAAAA CGGCGC TCAAGG GCGCCG TTTTGCTGCCGGCCA TERM 3425 3211261 - 3211278 + T 100 -10.5 -4.25104 | opp_overlap 3211261 GATACCGATAAAAAA CGGCGCT CAAG GGCGCCG TTTTGCTGCCGGCCA YPTB2718 3212770 - 3211421 - | putative two-component system sensor kinase TERM 3426 3212487 - 3212533 + g 100 -10.3 -5.27923 | opp_overlap 3212487 3212522 3212524, overlap 3212489 GAGAGAGCCGATATA TCTTTTTCTGCCGTATCTGCC ATCTC GGCAGGTAAGACAGAAAAATA TTTTTTGTCCGCTTC TERM 3427 3212533 - 3212487 - G 74 -11 -2.91239 | opp_overlap 3212487 3212489, overlap 3212522 3212524 GAGAGAGCCGATATA TCTTTTTCTGCCGTATCTGCCA TCT CGGCAGGTAAGACAGAAAAATA TTTTTTGTCCGCTTC TERM 3428 3212489 - 3212531 + g 100 -12.9 -4.26475 | opp_overlap 3212487 3212522 3212524, overlap 3212487 GAGAGCCGATATATC TTTTTCTGCCGTATCTGCC ATCTC GGCAGGTAAGACAGAAAAA TATTTTTTGTCCGCT YPTB2719 3213479 - 3212796 - | putative two-component system response regulator TERM 3429 3213237 - 3213271 + g 80 -2.7 -5.41746 | CCGATCAATATTGTC GCCTTTAGCCGTTAA CATAA TGATCGGCAAACGGC TTTTTTTACGCACTT YPTB2720 3213667 - 3214872 + | HlyD family secretion protein YPTB2721 3214876 - 3216912 + | ABC transporter permease/ATP-binding protein TERM 3430 3216956 - 3216969 + T 86 -6.7 -4.9645 | GCTTTCATCGTGATA GGTCA TCCG TGACC TTTTATTGTTATCAT TERM 3431 3217134 - 3217147 + T 74 -4.5 -4.83615 | AACGCGAATTATTTT GGGTA TAGA TGCCC TTTTTATACAAAATA YPTB2722 3218813 - 3217167 - | putative pyridine nucleotide-disulphide oxidoreductase TERM 3432 3217913 - 3217885 - G 74 -11 -2.81584 | gap 1, opp_overlap 3217903, overlap 3217884 ATATCAGCCAATAAT CT-GCCTTGCCGG TTAG CCGGCCAGGCCAG TGGAATATACGTTGC YPTB2723 3220333 - 3218873 - | putative sodium:solute symporter (SSS) family protein TERM 3433 3220147 - 3220115 - G 71 -9.1 -3.50393 | overlap 3220117 GGTGAGCGTATATAA TATGGCTGGGCCTTT TCC ATAAGCCCAGCCACT GCCCCCCAAGAATGT TERM 3434 3220145 - 3220117 - G 93 -13.9 -3.32698 | overlap 3220115 TGAGCGTATATAATA TGGCTGGGCCTTT TCC ATAAGCCCAGCCA CTGCCCCCCAAGAAT YPTB2724 3220527 - 3220330 - | hypothetical protein YPTB2725 3221890 - 3220670 - | putative peptidase YPTB2726 3223105 - 3221924 - | putative aminotransferase TERM 3435 3224211 - 3224191 - g 90 -14.1 -3.06315 | TTAATATGCTTAACA CCACCGATA CGC TATCGGTGG TGGCCTACGATAACC YPTB2727 3223806 - 3225224 + | hypothetical protein TERM 3436 3225321 - 3225347 + F 72 -10.1 -2.88849 | gap 1, opp_overlap 3225310, overlap 3225316 3225322 ACATCCATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCTCTGCC TERM 3437 3225322 - 3225348 + F 84 -10.1 -3.82218 | gap 1, opp_overlap 3225310, overlap 3225316 3225321 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCTCTGCCT TERM 3438 3225426 - 3225451 + F 93 -11.9 -3.66378 | overlap 3225427 ATAAAAGTTCATTTA TGCTGAGTCAG TACG CTGGCTCAGCG TTTACATGGGATATG TERM 3439 3225427 - 3225450 + F 91 -13.2 -2.79505 | overlap 3225426 TAAAAGTTCATTTAT GCTGAGTCAG TACG CTGGCTCAGC GTTTACATGGGATAT YPTB2728 3225469 - 3227013 + | putative two-component sensor histidine kinase YPTB2729 3227010 - 3227717 + | putative two-component response regulator TERM 3440 3228398 - 3228382 - T 71 -8.7 -3.28497 | opp_overlap 3228381 3228384, overlap 3228377 TGATCTGAAATTCAA GACCAGC CTT ACTGGTC CTTGATAAACATATA cysM 3230455 - 3229562 - | cysteine synthase B cysA 3231717 - 3230626 - | sulfate/thiosulfate transporter subunit TERM 3441 3231036 - 3231026 - G 73 -2.4 -5.10163 | AATTCCAAAACAAAA CGGG TTG CCGG TTCACGCCAGACTTC cysW 3232582 - 3231707 - | sulfate/thiosulfate transporter permease subunit TERM 3442 3232137 - 3232123 - G 81 -5.7 -4.8667 | GACAGGTGACAAAAA TGGTG ACCAG CACCA TACCGGGCCAGGAGA TERM 3443 3232351 - 3232339 - G 71 -4.8 -4.63527 | GCACCACCCCAAAAA CCAG GTTCA CTGG CACGGTTATCAATGC cysT 3233415 - 3232582 - | sulfate/thiosulfate transporter subunit TERM 3444 3232681 - 3232639 - G 100 -12.6 -3.96618 | GTTAATGCTAAACAA CAGCGCCAGTGACACGGCCA GAA TCACCGAGGCAATGGCGCTG GCTGCCGGGTAATCA cysP 3234452 - 3233415 - | thiosulfate transporter subunit TERM 3445 3234719 - 3234698 - R 100 -12.3 -6.32017 | gap 1 AACAAATAAAAAAAA GCCCGGT-CG TCG CGCACCGGGC AAGAAAAACAGTTTA nanT 3236317 - 3234785 - | putative sialic acid transporter TERM 3446 3236114 - 3236098 - G 73 -8 -3.99405 | TGAAGGCAGCAGAAA TCAGGC TGGTC GCCTGA ATCAGTGTCAGGCCA TERM 3447 3236502 - 3236490 - R 76 -7.7 -4.22375 | opp_overlap 3236490 3236489 ATAGCATTTAATAAA GGAGT AAA ACTCC ATTTGAGTGTATAAG YPTB2737 3237800 - 3236922 - | rpiR family transcriptional regulatory protein TERM 3448 3237378 - 3237362 - G 73 -3.7 -4.88228 | overlap 3237364 3237368 AGCCAACACCAAAAA TACAGAT GCG ATCCGCA GGGCGCAGCAATTTG TERM 3449 3237938 - 3237925 - R 100 -9.5 -6.13503 | GATCAATAAAAAAAA CCCGG AAAA CCGGG TAAAAAGGTCAAAAA YPTB2738 3238460 - 3237990 - | hypothetical protein YPTB2739 3239414 - 3238542 - | N-acetylmannosamine kinase YPTB2740 3239683 - 3240822 + | leucine-rich repeat-containing protein TERM 3450 3240872 - 3240828 - f 81 -10.8 -3.25361 | gap 1, overlap 3240830 AAATTTATAAGTTAA CACCCTGTCCCCCATCAGCGA TAAC TCAGTGGTG-GGGACAGGGTA ACCTATAGCCAGACT TERM 3451 3240870 - 3240830 - f 79 -11.2 -3.18321 | gap 1, overlap 3240828 ATTTATAAGTTAACA CCCTGTCCCCCATCAGCGA TAAC TCAGTGGTG-GGGACAGGG TAACCTATAGCCAGA YPTB2741 3241090 - 3241791 + | N-acetylmannosamine-6-phosphate 2-epimerase nanA 3241854 - 3242747 + | N-acetylneuraminate lyase TERM 3452 3242807 - 3242785 - T 100 -13.5 -4.18044 | TGATAAATAATGAAA GGCCGGATT TCATC AATCCGGCC AACGGTGATATATTT YPTB2743 3243744 - 3242845 - | hypothetical protein TERM 3453 3242891 - 3242901 + g 71 -8.2 -3.72576 | GCAAAATAATAGCTG CCGG TAA CCGG TTTGCTAAAACGCAG TERM 3454 3243833 - 3243810 - R 74 -6.8 -4.39386 | CTGAAACGATTAAAA TTACCTTGCG ACAA CGCAAAATAA AGCGGGAAGAGAGAG TERM 3455 3243891 - 3243875 - R 76 -9.4 -3.4758 | TAGGAATAATATTAA GGCGCT GAGGT AGCGCC CAAGTGATAATAGCA yfeY 3244533 - 3243922 - | hypothetical protein ygiW 3244896 - 3245309 + | hypothetical protein TERM 3456 3247197 - 3247172 - g 71 -4 -4.6821 | gap 1, opp_overlap 3247175 3247181 AACCTGAAGAGAAAA CAACCCCGTCA ACGGA TG-CGGTGTTG AGTATGGCCTCATCC TERM 3457 3247508 - 3247520 + G 76 -9.1 -3.96216 | ATAGTTATAGCTTGG GTGCC TAC GGCAC TTATTTCGATAACAG YPTB2746 3245878 - 3248088 + | pertactin family virulence factor/autotransporter TERM 3458 3248106 - 3248133 + T 100 -14.2 -5.53991 | opp_overlap 3248105 AACATACCAGATGAG TGGTTTCCCGCG ATAA TGCGGGAGACCA TTTTTTTGCTCAATA YPTB2747 3248596 - 3248180 - | hypothetical protein TERM 3459 3249239 - 3249251 + r 70 -7.7 -3.64599 | opp_overlap 3249235 3249239 CGGCTGATCAATGCA TTGGC AAA GCCAA TTTAAGCTCTGGTGC YPTB2749 3250119 - 3249394 - | hypothetical protein YPTB2750 3250829 - 3250122 - | hypothetical protein YPTB2751 3251497 - 3250826 - | hypothetical protein YPTB2753 3252892 - 3252467 - | putative acetyltransferase TERM 3460 3253615 - 3253597 - g 74 -8.9 -3.61715 | TACGGCTTTGAAGAA GATGCCA TTCAT TGGCATC AGGTAGCGCATAGCC TERM 3461 3253708 - 3253734 + G 74 -2.8 -5.04385 | overlap 3253707 TATATTAAACATCGC CAGGAAGCCCGT GGT ATTGGCGGCCTG TTTTTTGACGATCTG TERM 3462 3254030 - 3254010 - g 76 -9.7 -3.65812 | GCGCTGGGAATATAA CTATCAGCC AGA GGCAGATAG TGCAGAAGCCGCGTT hemF 3253174 - 3254103 + | coproporphyrinogen III oxidase TERM 3463 3254319 - 3254306 - g 87 -5.3 -5.40072 | GCGGGTGGAAAAAAA TGATC TGGT GATCA CCGCAGATATCCCAC YPTB2755 3254103 - 3254561 + | hypothetical protein maeB 3257005 - 3254726 - | malic enzyme TERM 3464 3255145 - 3255116 - G 70 -7.9 -3.82191 | GGAATGGGACAACAA CGCCACTTTGG GCTCAATA CCAAAACGGCG CACGGTTTCAGCTGC TERM 3465 3256147 - 3256179 + g 71 -7 -4.13728 | gap 1, opp_overlap 3256160, overlap 3256177 CCGGTTCCGGGTTTG CCAGGGC-CAGAATC AACG GATTCGGTGCCATGG TTTTCACCATCTCTG TERM 3466 3256907 - 3256924 + g 85 -11.3 -3.90112 | opp_overlap 3256906 3256905, overlap 3256912 CGCCAGTGCCAAATC CCGTTGG GTCG CCAACGG TTTGGTTGGCGAAAC YPTB2757 3258367 - 3257744 - | hypothetical protein TERM 3467 3258422 - 3258450 + r 77 -10.2 -3.22774 | opp_overlap 3258422 CTGCTGCAGTAAAAA CGCCCTGCCGAC GCAAA GTCCACAGGGCG TTAATCATCACTCTC TERM 3468 3258450 - 3258422 - R 100 -12.4 -4.72272 | opp_overlap 3258422 CTGCTGCAGTAAAAA CGCCCTGCCGAC GCAAA GTCCACAGGGCG TTAATCATCACTCTC napC 3259123 - 3258524 - | cytochrome c-type protein NapC TERM 3469 3259175 - 3259163 - R 78 -9.1 -3.76224 | CGGTTACTGACCAAA GCCAG GTG CTGGC TGGAAGCTATTACCA napB 3259618 - 3259151 - | diheme cytochrome c550 TERM 3470 3259406 - 3259438 + g 79 -2 -5.38549 | overlap 3259377 3259407 GCTATGTGGGATCAT CGG-TGGCTGGTTAAC ATA GTTCAGC-GCCATCCG TTTTTGTTGTTTAGG napA 3262193 - 3259701 - | nitrate reductase TERM 3471 3260034 - 3260087 + g 70 -9.7 -3.14132 | gap 2, opp_overlap 3260011 CCAATGTTCCAGCAC CCGGCCGGTAGAGAGCCACAGGTCA TACTCT TGATCCG-GGCTTTCTGCTG-CCGG TTCATAAGGCAGGGC TERM 3472 3261157 - 3261172 + g 85 -5.4 -5.26918 | gap 1 TGATCTTCTGGTACA CCGCTCA TTT TG-GCGG TTTTTTCTAACGTGT napD 3262456 - 3262190 - | assembly protein for periplasmic nitrate reductase napF 3262949 - 3262446 - | ferredoxin-type protein NapF TERM 3473 3262745 - 3262734 - G 72 -5.8 -4.38154 | overlap 3262699 ACAGGCCTGACAAAA GCTG CACT CAGC ACGTTGAAAATCTAT TERM 3474 3263248 - 3263281 + H 73 -2.6 -5.11613 | opp_overlap 3263251, overlap 3263279 TTCATTTAACGGGAA TAATTACCAAAACA AGACGA TGCTTTGATAATTA TTTTTTAGATAATCT TERM 3475 3263616 - 3263581 - H 80 -9 -3.9578 | ACATACGCTAAATAA TTCGAGTGGCAGGAAG ACAG CCCCCTGCAACTTGAA GTATGACGGGTATAG narP 3263782 - 3264411 + | nitrate/nitrite response regulator protein NarP TERM 3476 3264426 - 3264406 - T 86 -2.6 -5.79595 | opp_overlap 3264406 3264409, overlap 3264409 TTGGAAAATAAAAAA TACTGACA TCCGT TGTCACTA TTTAATGGCCGCTAA YPTB2764 3264702 - 3264424 - | hypothetical protein TERM 3477 3265858 - 3265843 - g 71 -9 -3.5511 | overlap 3265841 TCCCAGCTACAAACA CCCGAA GAGT TTCGGG AAATTACGCTACGGG TERM 3478 3267190 - 3267166 - g 74 -10.7 -2.77182 | opp_overlap 3267165, overlap 3267163 3267168 TTCGATATGGAATTA CAGGACCATGG CGG CCATGGCCATG ATAAATTGATGGCCG YPTB2765 3265117 - 3268248 + | aminoglycoside/multidrug efflux system TERM 3479 3268308 - 3268333 + F 76 -7.6 -4.20783 | AGTCGGTTCTCCCCT GCGGCATG ACGAAAAAAC CATGCCGC TTTATTGCATCAGAT YPTB2766 3268479 - 3269063 + | hypothetical protein TERM 3480 3269114 - 3269133 + F 74 -7.8 -4.01564 | overlap 3269115 3269117 CGCGCAATACTCACT CTAGGGCG TCCC CGCCCTAC TTTCTGGCTATTTTA TERM 3481 3269115 - 3269132 + F 83 -11.3 -2.99854 | overlap 3269114 3269117 GCGCAATACTCACTC TAGGGCG TCCC CGCCCTA CTTTCTGGCTATTTT TERM 3482 3269117 - 3269130 + F 71 -9.5 -3.0386 | overlap 3269115 3269114 GCAATACTCACTCTA GGGCG TCCC CGCCC TACTTTCTGGCTATT ybcI 3269352 - 3269900 + | hypothetical protein TERM 3483 3270066 - 3270088 + T 79 -6.9 -4.58283 | opp_overlap 3270066 GCGGGTAATAAAAAA GGCAGTGCC TCTAC GGTTCTGCC TTTTTGCGAGGATTC TERM 3484 3270088 - 3270066 - T 87 -4.7 -5.4505 | opp_overlap 3270066 GCGGGTAATAAAAAA GGCAGTGCC TCTAC GGTTCTGCC TTTTTGCGAGGATTC YPTB2768 3271822 - 3270647 - | putative sulfatase modifier protein TERM 3485 3270812 - 3270798 - G 71 -5 -4.57073 | overlap 3270800 TACCCTGCGCAAAAA TAGGAT TTC ATCCCA TCGCTGTCCTGATCA TERM 3486 3271432 - 3271459 + g 71 -9.2 -3.54543 | ATCCTTTGCCTGAGC GAGTCACACGGT AGCG ATCGTGTAACTC TTTAGGGCCATCAAT TERM 3487 3271870 - 3271846 - R 79 -10.7 -3.05993 | opp_overlap 3271846 3271867 3271868, overlap 3271848 TCATGGAGATAGACA GACGGCAAGAA AAA TACTTGCCGCC TTTGGGGCTTAATTC TERM 3488 3271846 - 3271870 + r 73 -8.5 -3.62478 | opp_overlap 3271846 3271848, overlap 3271867 3271868 TCATGGAGATAGACA GACGGCAAGAA AAA TACTTGCCGCC TTTGGGGCTTAATTC TERM 3489 3271868 - 3271848 - R 74 -9.7 -3.08465 | opp_overlap 3271846 3271867, overlap 3271846 ATGGAGATAGACAGA CGGCAAGAA AAA TACTTGCCG CCTTTGGGGCTTAAT ydeN 3273552 - 3271879 - | putative sulfatase TERM 3490 3272885 - 3272910 + g 70 -9.7 -3.16881 | opp_overlap 3272885 3272884 3272882 TAACCCATAAAATAC TGGAAGCCTCG GTTT TGAGGCTGCCA TTCATCGGCTGAGTA TERM 3491 3273806 - 3273795 - R 71 -2.2 -5.10497 | AAGCCACTGAAAAAA CACA ATGA TGCG ATATTAAACGGTGAG YPTB2770 3275100 - 3274030 - | ABC transporter ATP-binding protein YPTB2771 3276862 - 3275093 - | iron ABC transporter permease TERM 3492 3276715 - 3276701 - G 73 -2.1 -5.1471 | ATCAGAAAAAATAAA CCTGA ACGCA TCAAG ACTCAGTACCTTTGA TERM 3493 3276945 - 3276914 - R 81 -9.4 -3.75517 | gap 1, overlap 3276915 AGCCGATAAAACCAA GGACTGCGCATGCCC ATA AGGCAAGCGCA-CCC AGATAAAGCCACTAT TERM 3494 3276945 - 3276915 - R 70 -9.6 -2.84587 | overlap 3276914 GCCGATAAAACCAAG GACTGCGCATGCCC ATA AGGCAAGCGCACCC AGATAAAGCCACTAT YPTB2772 3278045 - 3276957 - | putative ABC transporter, periplasmmic iron binding protein TERM 3495 3277140 - 3277157 + g 73 -7.7 -4.03234 | opp_overlap 3277129 AATATCTGACTGATT GGCCAGA ATAT TTTGGCC TTTCTCTGAGAGCAG TERM 3496 3277625 - 3277641 + g 75 -5.1 -4.74706 | opp_overlap 3277627 CAACGGGTTCGTAAG TAGAGCC GTA GGCTTTG TTTTTCCATATTGCC TERM 3497 3278334 - 3278318 - H 71 -9.5 -2.96184 | overlap 3278317 3278320 CAGCAAAATCTAAAG CAGCAAA CAG TTTGCTG ATAAGCCACGGTGTG YPTB2773 3278356 - 3278829 + | hypothetical protein YPTB2774 3278989 - 3279387 + | hypothetical protein TERM 3498 3279755 - 3279766 + G 71 -7.2 -3.9712 | opp_overlap 3279755 CACCCTGACCACAAA GGCC GCCT GGCC TTTATGATAACCTCC TERM 3499 3279766 - 3279755 - g 71 -7.2 -3.96624 | opp_overlap 3279755 CACCCTGACCACAAA GGCC GCCT GGCC TTTATGATAACCTCC dapE 3279389 - 3280516 + | succinyl-diaminopimelate desuccinylase TERM 3500 3280592 - 3280616 + G 73 -7.9 -4.08767 | gap 1 TAAGTGGCGCTCATC GCCTACAGCC ACAGGC GGCTG-AGGC TTTTCAAGCAATGCA YPTB2776 3280513 - 3281190 + | putative carboxypeptidase YPTB2777 3281216 - 3281452 + | hypothetical protein YPTB2778 3283751 - 3281700 - | putative acetyltransferase TERM 3501 3282378 - 3282404 + g 78 -10.8 -3.29043 | overlap 3282379 3282381 CAGCGTTGGTGCCTG CCACTGCCCGCT ATG AGCGGCCAGTGA TTGTGCCACCAGATT TERM 3502 3282379 - 3282403 + g 87 -14.3 -2.57211 | overlap 3282378 3282381 AGCGTTGGTGCCTGC CACTGCCCGCT ATG AGCGGCCAGTG ATTGTGCCACCAGAT TERM 3503 3282381 - 3282401 + g 74 -11.1 -2.82623 | overlap 3282379 3282378 CGTTGGTGCCTGCCA CTGCCCGCT ATG AGCGGCCAG TGATTGTGCCACCAG TERM 3504 3282862 - 3282850 - G 75 -3.3 -5.16237 | overlap 3282851 AATTTCAGTAAAAAA CCACG CCC CGTGC CCTCATATCCCTGTA yeaL 3284205 - 3283753 - | hypothetical protein YPTB2780 3285168 - 3284299 - | hypothetical protein TERM 3505 3284783 - 3284770 - G 75 -5.9 -4.63218 | TGCCGGGCAATAAAA CGGCC CCAT GACCG ACTGACCGGTACCAC purC 3286100 - 3285387 - | phosphoribosylaminoimidazole-succinocarboxamide synthase TERM 3506 3286145 - 3286168 + r 100 -13.2 -5.18371 | opp_overlap 3286145 3286150 GTCGTCATGAAATAA CTAAAGGGGC CGAA GCCCCTTTGG TTTTATTTTATCGCG TERM 3507 3286168 - 3286145 - R 90 -11 -4.00042 | opp_overlap 3286145, overlap 3286150 GTCGTCATGAAATAA CTAAAGGGGC CGAA GCCCCTTTGG TTTTATTTTATCGCG TERM 3508 3286163 - 3286150 - R 85 -9.5 -4.16371 | opp_overlap 3286145, overlap 3286145 CATGAAATAACTAAA GGGGC CGAA GCCCC TTTGGTTTTATTTTA dapX 3287229 - 3286171 - | lipoprotein TERM 3509 3286560 - 3286593 + g 85 -10.9 -3.86822 | GCGTACCGACTTTAC GTGAGGCCTGACTGC TCTC GCTGTCAGCCCGCAC TTTATCCAAACCTTC dapA 3288146 - 3287247 - | dihydrodipicolinate synthase TERM 3510 3288228 - 3288239 + H 93 -2.2 -6.15717 | ACTGTGTTGTAAGCG CTTG GCAG CAGG TTTTTTTTATGTTTA TERM 3511 3288425 - 3288439 + G 74 -6.4 -4.36554 | CGGCTGGCTATGTTC GGTGAG GAG TTCACC TTTATTATGCTGCTA gcvR 3288293 - 3288862 + | glycine cleavage system transcriptional repressor bcp 3288865 - 3289335 + | thioredoxin-dependent thiol peroxidase TERM 3512 3289392 - 3289377 - T 100 -10.4 -4.34711 | opp_overlap 3289379 AAAATTAACGGAAAA GAGCGC TCTG GCGCTC TTGAGGTTATTGACA YPTB2786 3289998 - 3289579 - | hypothetical protein YPTB2787 3290697 - 3290002 - | hypothetical protein YPTB2788 3291035 - 3291208 + | hypothetical protein perM 3292361 - 3291297 - | putative permease protein TERM 3513 3291788 - 3291775 - G 74 -9.5 -3.53091 | ACCTGCCCGGCCAAA CCGCG GTTA CGCGG CAAAACACGGCGCAC TERM 3514 3292166 - 3292145 - G 71 -8.7 -3.63897 | overlap 3292143 CAAATAGCACAAATA CGATACTGG CCGC CCAGGATCG TGAACAACCAATACG YPTB2790 3292692 - 3294176 + | hypothetical protein yfgD 3294283 - 3294639 + | putative arsenate reductase YPTB2792 3295571 - 3294852 - | DNA replication initiation factor TERM 3515 3295644 - 3295675 + r 72 -9.6 -3.22077 | gap 1, opp_overlap 3295644 3295645, overlap 3295642 3295640 3295645 GAATTTGGTGAAAAA T-GGGCTGAACTG GCAACCG CAGTTCAGCCCTA TCTGGTTTTTATACG TERM 3516 3295674 - 3295644 - R 100 -11.2 -4.58283 | opp_overlap 3295642 3295640 3295644 3295645, overlap 3295645 GAATTTGGTGAAAAA TGGGCTGAACTG GCAACCG CAGTTCAGCCCT ATCTGGTTTTTATAC TERM 3517 3295673 - 3295645 - R 100 -14.7 -3.34488 | opp_overlap 3295645 3295644 3295642 3295640, overlap 3295644 AATTTGGTGAAAAAT GGGCTGAACTG GCAACCG CAGTTCAGCCC TATCTGGTTTTTATA TERM 3518 3295645 - 3295673 + r 100 -14.7 -3.16187 | opp_overlap 3295644 3295645, overlap 3295644 3295642 3295640 AATTTGGTGAAAAAT GGGCTGAACTG GCAACCG CAGTTCAGCCC TATCTGGTTTTTATA YPTB2793 3297104 - 3295818 - | uracil transporter TERM 3519 3296764 - 3296774 + g 79 -2.4 -5.44119 | ATGACATCCAGCCAC CCGG TCC CCGC TTTTTTTACAATCAG TERM 3520 3297252 - 3297235 - R 100 -8.4 -6.11019 | opp_overlap 3297235 AAAAATCAAAAAAAA GCCGAC TTTCAC GTCGGC TATCATCGTTATTTA upp 3297887 - 3297261 - | uracil phosphoribosyltransferase purI 3298322 - 3299365 + | phosphoribosylaminoimidazole synthetase purN 3299480 - 3300118 + | phosphoribosylglycinamide formyltransferase speG 3300347 - 3300892 + | spermidine acetyltransferase TERM 3521 3300897 - 3300916 + T 88 -10 -4.20768 | AAAATGCTTAATACG TTGGGGTC AGAT GGCCCCAA TTGTTTCTTCCCCGT fliB 3302146 - 3300986 - | putative N-methylation of lysine residues in flagellin TERM 3522 3301320 - 3301310 - G 73 -2.4 -5.06414 | opp_overlap 3301316 3301318 GTGCTGTAAGAAAAA GGGC CAT GCCT GTTGAGACCAGGTAT TERM 3523 3301453 - 3301443 - G 74 -6.8 -4.37658 | AATTGTGTCATAAAA TGCC CCA GGCA AGCCAATAACACCTT pstb 3303191 - 3302379 - | putative ABC phosphate transporter, ATP-binding subunit pstA 3304931 - 3303219 - | putative ABC phosphate transporter, permease subunit TERM 3524 3304368 - 3304388 + g 77 -6.7 -4.62302 | AGCTTGCCTGACCAG CGCCTGCAC AAT GGGGAGGCG TTTTTGCAGCTCTTG pstC 3307162 - 3304931 - | putative ABC phosphate transporter, permease subunit TERM 3525 3305617 - 3305593 - G 71 -2.7 -4.86822 | overlap 3305595 AACCACACAATAAAA TCGCCAGGGCT AGC AGCAGCGGCAA TAACAAGATCCCCGC TERM 3526 3306222 - 3306232 + g 76 -8.2 -4.09685 | opp_overlap 3306221 GTCAAATGGAACGAT GGGC TTG GCCC TTTTCGCACATCAAA ppk 3307433 - 3309496 + | polyphosphate kinase TERM 3527 3310574 - 3310562 - g 74 -6.3 -4.36914 | overlap 3310568 GTGGTTGGCACAAAA TACCA AGC TGGTA CAGCCCCAACTGGAA ppx 3309507 - 3311066 + | exopolyphosphatase TERM 3528 3311119 - 3311083 - f 79 -8 -4.38712 | gap 1, opp_overlap 3311086, overlap 3311085 CTGACGCTGATAAAA TCG-TGCACCGGGTGGT TGTC ATCACCCGGTGCGTCAA TTGACAGCATGAGCG TERM 3529 3311086 - 3311115 + F 100 -16.5 -2.52676 | opp_overlap 3311085 3311083 ACGCTGATAAAATCG TGCACCGGGTGGT TGTC ATCACCCGGTGCG TCAATTGACAGCATG yfgG 3311231 - 3311443 + | hypothetical protein mgtE 3311495 - 3312970 + | putative divalent cation (Mg++/Co++/Ni++) transport protein YPTB2806 3313107 - 3314462 + | putative chaperone TERM 3530 3314479 - 3314506 + T 100 -9.9 -5.09204 | overlap 3314475 CCCTATTATGTTCAC CTCTCAGTGAG TTATCT CGCACTGAGAG TTTTTGTTGGCGTAT YPTB2807 3315582 - 3314734 - | putative ABC opine/polyamine transporter, permease subunit YPTB2808 3316909 - 3315644 - | putative ABC opine/polyamine transporter, permease subunit TERM 3531 3316486 - 3316507 + g 85 -11.6 -3.70149 | TGATTAGCGCTTCAC GTACCGGC CCTTCA GCCGGTAC TTTCCGTAGTGTCGA YPTB2809 3317984 - 3316956 - | putative ABC opine/polyamine transporter, periplasmic binding protein TERM 3532 3317057 - 3317035 - G 73 -7.6 -4.13767 | TTGTTCATGGGAAAA GCCTCAGCCA GGT TGGCTGGCGC AGTGGGTAAATTAGC goaG 3319350 - 3318037 - | 4-aminobutyrate aminotransferase TERM 3533 3319283 - 3319293 + g 71 -4.6 -4.50943 | opp_overlap 3319272 ACACCAATCCCACGT GGGG TCG CCTC TTTTCTGCGTTGTTC TERM 3534 3320201 - 3320189 - g 74 -9.1 -3.67597 | GCCTGGATTGAAGAA CCCAG CTA CTGGG GGATCCGCAACGTGT TERM 3535 3320536 - 3320523 - g 75 -8.1 -4.26076 | GTACCTTCAGTAAAA CCCTG TATC CAGGG ATGCGTATCAGCTAC TERM 3536 3320791 - 3320811 + G 70 -9.7 -3.14602 | overlap 3320790 CGCGGGGCTGCACCT GATTCTGGC CTT GCCGGAGTC TATTGATGACGTGGC TERM 3537 3320909 - 3320892 - g 75 -5.5 -4.68593 | gap 1, opp_overlap 3320893 3320894, overlap 3320893 3320894 GCTATTACTTAAAAA GTCCCCCG CGA CGAGGG-C TGTTACTCGGTTATG YPTB2811 3319508 - 3321013 + | GntR family regulatory protein YPTB2812 3321396 - 3322481 + | ABC opine/polyamine transporter, ATP-binding subunit TERM 3538 3322879 - 3322868 - f 75 -2.2 -5.31877 | gap 1, overlap 3322869 AGCCACGATAAAAAA GGACG CTT CG-CC ATCATGAAATCTCAA yegM 3322883 - 3324217 + | multidrug efflux system subunit MdtA TERM 3539 3324249 - 3324259 + G 71 -8.2 -3.75817 | overlap 3324240 3324236 AACACCCGGTGGCGG GCCG TCA CGGC TGTTTATTCTGCGCC TERM 3540 3325070 - 3325054 - g 78 -5.8 -4.67697 | overlap 3325055 GCGGAAAATAACAAA CTGGCC GCCTG GGCCAA TACTCAATCAGCAAT TERM 3541 3325838 - 3325873 + G 78 -9 -3.97042 | CGTGGCTGACCCTAA GTGTCGCGTTCAGCAC ACTG GTGCTGACGGTGATAC TTTACTTGCTGATCC yegN 3324217 - 3327375 + | multidrug efflux system subunit MdtB yegO 3327372 - 3330446 + | multidrug efflux system subunit MdtC TERM 3542 3330903 - 3330944 + G 100 -10.8 -4.75404 | gap 1 GCGTTTGTCACACTG CCCGGCCAG-ATTGGGCCA TTAGT TGGCCCGGCGCTGGGCGGG TTTTTAGTGGAATTT TERM 3543 3331537 - 3331556 + G 73 -8.6 -3.9461 | CAATCATGGGTTGGA CACTGCTG ATGC CAGTAGTG TTATTCTTCCAAGGC yegB 3330480 - 3331877 + | multidrug efflux system protein MdtE TERM 3544 3332912 - 3332900 - g 80 -4.1 -5.18726 | CTTCCAGAACAAAAA GATGA CCA TCACC GCCCACCTGCCTGAA baeS 3331908 - 3333293 + | signal transduction histidine-protein kinase BaeS baeR 3333303 - 3334022 + | DNA-binding transcriptional regulator BaeR YPTB2819 3334159 - 3334497 + | hypothetical protein TERM 3545 3334580 - 3334602 + F 79 -7.7 -4.32046 | ACGACCACTTATCCC TGCGCGG GGCCATTAA CCGCGCA TTTCATTTTTGCACG YPTB2820 3334795 - 3336189 + | putative protease TERM 3546 3336209 - 3336227 + F 85 -6 -5.17353 | opp_overlap 3336209 ATTCAATAAAATGAA TGCCAC AGATAAA GTGGCA TTTTTTAGTAAATAT TERM 3547 3336343 - 3336370 + F 100 -13.5 -5.66926 | AGGAACCACCTCCTT GGCTAGCCCAA TCTCCC TTGGGCTGGCC TTTTCTTTTTTTTCC TERM 3548 3337591 - 3337557 - g 74 -6.5 -4.36508 | gap 1, overlap 3337554 TGAGAAAAATAAGAA TGTTATCGACGCCACG GTAC CTTGGC-TCGATATCA CTGCACCGAACGATA YPTB2821 3336826 - 3337716 + | lipid kinase TERM 3549 3337940 - 3337900 - T 76 -6.7 -4.56113 | opp_overlap 3337910 3337911, overlap 3337902 AACAGAGTAAATAAA CAGCGGAGCACGGCGAGAA CCG CCCTTGTCTTGCTCCGCCA TTGGCGATTCGGGGC TERM 3550 3337938 - 3337902 - T 81 -9.3 -3.8721 | opp_overlap 3337910 3337911, overlap 3337900 CAGAGTAAATAAACA GCGGAGCACGGCGAGAA CCG CCCTTGTCTTGCTCCGC CATTGGCGATTCGGG TERM 3551 3337993 - 3337970 - T 73 -8.2 -3.61715 | CATTGTTGGCAATAA GTCATCACTC ATAA GAGTCATGAC GTGCAAAACTCAGCG YPTB2822 3338512 - 3338003 - | hypothetical protein TERM 3552 3338955 - 3338944 - g 83 -7.2 -4.74518 | opp_overlap 3338946 AATTATCAAAACAAA CGCG GTAC CGCG AACGGTTTTGTCATT YPTB2823 3338743 - 3339663 + | hypothetical protein thiD 3340491 - 3339691 - | phosphomethylpyrimidine kinase TERM 3553 3340347 - 3340357 + g 74 -6.8 -4.36914 | GATAAACCGACTGCA CACC ACA GGTG TTTTGTGCCACCAGC TERM 3554 3340554 - 3340536 - H 75 -8.9 -3.57561 | GGCTAATGGCGTAAA TTCAGCC GCAGT GGCTGAA AAGAGAACGGCAGGT YPTB2825 3341001 - 3341480 + | hypothetical protein TERM 3555 3342208 - 3342218 + G 77 -6.8 -4.49377 | GCTAAAATAGCCATT GTCG CGG CGAC TTCTTTTATTGTAGG YPTB2826 3341539 - 3342459 + | hypothetical protein YPTB2827 3342456 - 3342851 + | hypothetical protein YPTB2828 3342915 - 3343310 + | hypothetical protein YPTB2829 3343348 - 3343767 + | hypothetical protein YPTB2830 3343831 - 3344229 + | hypothetical protein YPTB2831 3344253 - 3344732 + | hypothetical protein TERM 3556 3344808 - 3344789 - T 100 -7.8 -6.04378 | opp_overlap 3344789 AAACCATAAAAAAAA CCGCCTAA TATT TAAGGCGG TTTCAGACTGCTGGC TERM 3557 3344789 - 3344808 + T 70 -7.8 -3.58343 | opp_overlap 3344789 AAACCATAAAAAAAA CCGCCTAA TATT TAAGGCGG TTTCAGACTGCTGGC TERM 3558 3344944 - 3344963 + T 84 -6.4 -4.98616 | opp_overlap 3344944 GTCAATAACCTCAAA CCGCCT AATATTCA AGGCGG TTTTTGCTATTTTCA guaA 3346588 - 3345011 - | bifunctional GMP synthase/glutamine amidotransferase protein TERM 3559 3346755 - 3346725 - R 100 -9.9 -5.79595 | opp_overlap 3346725 3346728 3346729 TTTTAAAATAAAAAA TAACCATCTGATG GCCAG CACCAGATGATTA TTTAACTAATTGTTA guaB 3348315 - 3346768 - | inositol-5-monophosphate dehydrogenase TERM 3560 3347692 - 3347708 + g 70 -2.2 -5.00616 | overlap 3347694 GACCAACACTTTCTC TACACG TTTTT CGTGCA TTTTTTGCAGCACAA xseA 3348401 - 3349780 + | exodeoxyribonuclease VII large subunit YPTB2835 3350176 - 3349952 - | hypothetical protein YPTB2836 3351181 - 3350225 - | malate permease TERM 3561 3351332 - 3351321 - R 85 -2.2 -5.77988 | ATATAGAGAAAAAAA CCAG GCTA CTGA CAAACCCCGATGACG TERM 3562 3351409 - 3351383 - R 86 -10.1 -3.9749 | gap 1, overlap 3351384 AGGCAGAAGAGTAAA GTGTCCGCGCCA GAGA TGGCGCGG-CTC AAGCTCCCAAGGAAG engA 3353015 - 3351528 - | GTP-binding protein EngA TERM 3563 3353096 - 3353118 + r 100 -10.5 -4.63527 | opp_overlap 3353075 3353096 TTTTTAGAATACAAA CGGCCCCTG AGTCC CAGGAGCCG TTTTTGAGGTACTGG TERM 3564 3353118 - 3353096 - R 100 -13.4 -4.27117 | opp_overlap 3353096, overlap 3353075 TTTTTAGAATACAAA CGGCCCCTGA GTC CCAGGAGCCG TTTTTGAGGTACTGG yfgL 3354344 - 3353163 - | outer membrane protein assembly complex subunit YfgL TERM 3565 3353399 - 3353380 - G 71 -6.4 -4.21974 | overlap 3353381 TTACGATGCAATAAA TCGCTTTG ACTC CAAAGCGT TACGCCGCCATCAGA TERM 3566 3353398 - 3353381 - G 70 -9.9 -3.12702 | overlap 3353380 TACGATGCAATAAAT CGCTTTG ACTC CAAAGCG TTACGCCGCCATCAG yfgM 3354991 - 3354356 - | hypothetical protein hisS 3356279 - 3355005 - | histidyl-tRNA synthetase ispG 3357615 - 3356488 - | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase TERM 3567 3356531 - 3356547 + g 74 -9.5 -3.55203 | ACAATCCGGTTATTC GCATCAA GAA TTGATGC TTTGGCACGAATTTT TERM 3568 3357492 - 3357503 + g 72 -5.8 -4.44797 | opp_overlap 3357485, overlap 3357500 GGGCAACAGTGGCAT CCAC ATCC GTGG TTTTGGTATTGGTCA yfgA 3358807 - 3357719 - | hypothetical protein YPTB2843 3359546 - 3358797 - | putative fimbrial biogenesis protein YPTB2844 3360896 - 3359700 - | hypothetical protein TERM 3569 3361031 - 3360992 - R 100 -13.6 -4.11906 | opp_overlap 3360992 3360994, overlap 3360997 AGAATGTATAAATAA TAGAACGCCCCAGCAGAG CTGT CTCTACTGGGGCGTGGCA TTGTACAAATTTTAA TERM 3570 3360992 - 3361031 + r 74 -9.2 -3.36518 | opp_overlap 3360992 3360997, overlap 3360994 AGAATGTATAAATAA TAGAACGCCCCAGCAGAG CTGT CTCTACTGGGGCGTGGCA TTGTACAAATTTTAA TERM 3571 3360994 - 3361030 + r 80 -11.6 -2.61429 | gap 1, opp_overlap 3360992 3360997, overlap 3360992 AATGTATAAATAATA G-AACGCCCCAGCAGAG CTGT CTCTACTGGGGCGTGGC ATTGTACAAATTTTA TERM 3572 3361026 - 3360997 - R 100 -20.1 -3.93744 | opp_overlap 3360994 3360992, overlap 3360992 GTATAAATAATAGAA CGCCCCAGCAGAG CTGT CTCTACTGGGGCG TGGCATTGTACAAAT ndk 3361586 - 3361158 - | nucleoside diphosphate kinase YPTB2846 3364334 - 3361914 - | hypothetical protein TERM 3573 3362509 - 3362497 - G 74 -6.3 -4.37092 | ACCGTCTCGATAAAA TGGTA ATC TACCA GTGCCAGTTCATAAC TERM 3574 3363840 - 3363850 + g 75 -3.2 -5.12068 | GACTGTAGTTTGCAT TCCT GGA GGGA TTTTTATTGAATATA YPTB2847 3364509 - 3364766 + | hypothetical protein yapA 3365050 - 3369399 + | pertactin family virulence factor/autotransporter TERM 3575 3369489 - 3369514 + F 100 -11.1 -4.7078 | opp_overlap 3369488 3369487 3369489 TGACTGATAAAAACC GCAGGGGGCTG CAAT TGGCTCCCTGC TTTTTACCTGATTGA TERM 3576 3369891 - 3369904 + F 82 -6.7 -4.75308 | opp_overlap 3369891 3369890 TTAGCGGCCATAAAT TGTCG TTAG CGACA TTTTTCACTCTTAGT TERM 3577 3370633 - 3370620 - g 77 -4.5 -4.93296 | overlap 3370621 GTACTACGACAAAAA CTGGC GCAG GCCAA AGAAAAGCTAGAGAT TERM 3578 3370651 - 3370640 - g 74 -4.4 -4.88918 | GCAGGCCAAAGAAAA GCTA GAGA TAGC TAAAAATGACCCTAA yapB2 3369957 - 3373322 + | pertactin family virulence factor/autotransporter TERM 3579 3373464 - 3373488 + F 77 -6.4 -4.7078 | gap 1, opp_overlap 3373464 TAGCTGATAAAAACC GCAGGG-GCTG TAAT TGGCTCCCTGC TTTTTACCTGATTAA TERM 3580 3373783 - 3373770 - f 84 -3.9 -5.56673 | overlap 3373763 AGTCAGAATAAAAAA TCAAT TTTT ATTGA AATTAATATCAATCC TERM 3581 3374463 - 3374451 - g 82 -5.5 -5.02606 | GACGAAAGAACAAAA CGGCT TGA AACCG CGAACGCCCAACAGC TERM 3582 3374972 - 3374960 - g 78 -7.7 -4.43173 | AAAAATAATTCAAAA CGCTA AAT TAGCG CAACAAGCGATGGCA yapB1 3373929 - 3377444 + | pertactin family virulence factor/autotransporter TERM 3583 3377516 - 3377486 - T 72 -7.6 -3.85817 | gap 1, opp_overlap 3377487, overlap 3377487 3377491 ACGGTGTGGCAGAAA TGGA-AGGGAGCC TCTATT GGCTCCCTATCCT TTTAGATACTAATCA TERM 3584 3377487 - 3377515 + T 93 -11.1 -4.21908 | gap 1, opp_overlap 3377487 3377486 3377491 CGGTGTGGCAGAAAT GGA-AGGGAGCC TCTATT GGCTCCCTATCC TTTTAGATACTAATC TERM 3585 3377515 - 3377487 - T 79 -11.1 -2.91276 | gap 1, opp_overlap 3377487, overlap 3377486 3377491 CGGTGTGGCAGAAAT GGA-AGGGAGCC TCTATT GGCTCCCTATCC TTTTAGATACTAATC TERM 3586 3377510 - 3377491 - T 81 -10.7 -3.32997 | opp_overlap 3377487, overlap 3377487 3377486 GTGGCAGAAATGGAA GGGAGCC TCTATT GGCTCCC TATCCTTTTAGATAC YPTB2851 3378482 - 3377529 - | enhanced serine sensitivity protein SseB TERM 3587 3377921 - 3377943 + g 93 -13.4 -3.61715 | TGTCTACCACCATTT CAGCGGGTTG CAC CAACCCGCCG TTCTTCAACAGCATC TERM 3588 3378209 - 3378187 - G 71 -8.5 -3.7398 | gap 1, overlap 3378185 TCCCAATGCAAAATA TTCACC-CCG TTAG CGGTGGTGAA ACTCATTTCGCCATC TERM 3589 3378539 - 3378513 - R 78 -10.1 -3.42459 | opp_overlap 3378517 3378537, overlap 3378507 3378517 CATCGAGAAGATGAA CGAAGGGACGC CAAAT GCGCCCCTTTG AGTCTTCTCAATTCA TERM 3590 3378535 - 3378517 - R 76 -9.5 -3.4684 | opp_overlap 3378517, overlap 3378513 3378507 GAGAAGATGAACGAA GGGACGC CAAAT GCGCCCC TTTGAGTCTTCTCAA TERM 3591 3378517 - 3378535 + r 70 -7.3 -3.79071 | opp_overlap 3378517 3378513 3378507 GAGAAGATGAACGAA GGGACGC CAAAT GCGCCCC TTTGAGTCTTCTCAA pepB 3379859 - 3378561 - | aminopeptidase B TERM 3592 3378951 - 3378972 + g 71 -6.5 -4.25104 | opp_overlap 3378966 GCCGGTTAAGGTGGC TGCGTCGAT AATC AACGGCGCA TTTTGCTCGGAGGCA TERM 3593 3379988 - 3379973 - R 100 -8.2 -5.49234 | ATACGCAATAAAAAA GGCCGC TTGC GCGACC CAGTCAGTATTCACT YPTB2853 3380199 - 3379999 - | hypothetical protein fdx 3380564 - 3380229 - | ferredoxin hscA 3382501 - 3380567 - | chaperone protein HscA TERM 3594 3380629 - 3380598 - G 100 -15.2 -3.56568 | overlap 3380589 GAATGACCTGCTAAA GCACGGCGAATGGA AGCG TCCATCCGGCGTGC GGCAAAATCTTGCGT TERM 3595 3380738 - 3380717 - G 91 -13.7 -3.61398 | opp_overlap 3380714 CTGCTGCTGTAATAA CGCGACCGC TTGG GCGATCGCG GCACTTTCTTGCTCA hscB 3383268 - 3382744 - | co-chaperone HscB iscA 3383702 - 3383379 - | iron-sulfur cluster assembly protein nifU 3384358 - 3383972 - | scaffold protein iscS 3385618 - 3384389 - | cysteine desulfurase YPTB2860 3386166 - 3385672 - | DNA-binding transcriptional regulator IscR TERM 3596 3385998 - 3386011 + g 71 -3.8 -4.66163 | CTGGGCCGCGTACGC TGGC GACTAA GCCA TTTTTACGTAGGCGT YPTB2861 3387095 - 3386322 - | SpoU family rRNA methylase TERM 3597 3386979 - 3387016 + g 83 -9.5 -4.29738 | gap 1, opp_overlap 3386969 3386982 3386999 AGAATCTGGTTTTAC CAAT-GGATTAACCAA ATATAGA TTGGTTAATCCCATTG TTTTCATGGCTCTGG suhB 3387214 - 3388017 + | inositol monophosphatase TERM 3598 3388071 - 3388048 - T 100 -10.3 -4.96848 | opp_overlap 3388048 CGTTTCAGATAAAAA GCCAGTCAG GGTTAG CCGACTGGC TTTTTTTATTGGGAA TERM 3599 3388048 - 3388071 + T 100 -8.9 -5.7946 | gap 1, opp_overlap 3388048 CGTTTCAGATAAAAA GCCAGTCAGG GTTAG CC-GACTGGC TTTTTTTATTGGGAA YPTB2863 3389138 - 3388116 - | hypothetical protein YPTB2864 3389803 - 3389129 - | hypothetical protein TERM 3600 3389521 - 3389507 - G 73 -10 -3.36073 | overlap 3389505 TATATCGGTGAAATA GTGCTG CCC CAGCAC ATTAGCCATCACTTC TERM 3601 3391217 - 3391244 + G 83 -12.8 -3.03781 | opp_overlap 3391218, overlap 3391214 TATGTTTTGCAATCA ACTGAATCAGCG CCGC CGCTGATTCAGA TATCATTTCCGTTAA TERM 3602 3391243 - 3391218 - g 100 -16.3 -3.33815 | opp_overlap 3391217 3391214 ATGTTTTGCAATCAA CTGAATCAGCG CCGC CGCTGATTCAG ATATCATTTCCGTTA YPTB2865 3389945 - 3391306 + | stationary phase inducible protein CsiE hcaT 3392460 - 3391303 - | putative 3-phenylpropionic acid transporter TERM 3603 3392865 - 3392881 + r 72 -6.5 -4.3534 | opp_overlap 3392866, overlap 3392866 TGTCAGCAATCTGAA ACCACCA TTA TGGTGGG TTTTCATGGTTAGGA TERM 3604 3392866 - 3392880 + r 74 -10 -3.20722 | opp_overlap 3392866, overlap 3392865 GTCAGCAATCTGAAA CCACCA TTA TGGTGG GTTTTCATGGTTAGG TERM 3605 3392880 - 3392866 - R 80 -10 -3.67976 | opp_overlap 3392866 3392865 GTCAGCAATCTGAAA CCACCA TTA TGGTGG GTTTTCATGGTTAGG ail 3393450 - 3392902 - | attachment invasion locus protein YPTB2868 3393780 - 3393559 - | hypothetical protein TERM 3606 3393879 - 3393858 - R 95 -11.5 -3.86202 | CCCGATGAGATCAAA GCCCCGGCC AGGA GGCCAGGAC GGTGACAGCCGCCTT glyA 3395146 - 3393893 - | serine hydroxymethyltransferase TERM 3607 3395532 - 3395544 + H 80 -6.3 -4.87626 | overlap 3395541 AGAATTATCCTCATA TTCAC TAT GTGAA TTTTTCATCTTCAGC TERM 3608 3396422 - 3396438 + G 70 -2.1 -4.89966 | opp_overlap 3396405, overlap 3396423 GATATCGTGCGCATC GCACCAC CCC GTGGCGA TTTCTTTTTGGATGT hmp 3395687 - 3396877 + | nitric oxide dioxygenase TERM 3609 3396914 - 3396941 + F 80 -9.9 -3.695 | overlap 3396915 CTACGCACTTAATGC CGCTGATCAGG AAGGTA CCTGATCAGCA TTTCGGCTATTTCAA TERM 3610 3396915 - 3396940 + F 93 -13.4 -2.81218 | overlap 3396914 TACGCACTTAATGCC GCTGATCAGG AAGGTA CCTGATCAGC ATTTCGGCTATTTCA yhfZ 3397341 - 3398240 + | hypothetical protein TERM 3611 3398383 - 3398358 - T 87 -6.2 -5.13473 | gap 1, opp_overlap 3398358 ATTATATGTAAAAAA CCCGCATCGTT TTGGC AACGA-ACGGG CTTTTGTTATTCAGC glnB 3398760 - 3398422 - | nitrogen regulatory protein P-II 1 nadE 3400397 - 3398775 - | NAD synthetase YPTB2874 3401894 - 3400557 - | two-component system response regulator TERM 3612 3400910 - 3400899 - GR 73 -7.2 -4.19371 | GAAACTGCGAACAAA CGGC TTAT GCCG CTTAGCCGACTCCCG YPTB2875 3402969 - 3401857 - | hypothetical protein TERM 3613 3402057 - 3402075 + gr 72 -7.4 -3.93383 | overlap 3402030 TTGACTTAGGGGCAA CCGGCTGA GCT TCAGTTGG TTTGGTGTCTGTTGG TERM 3614 3402883 - 3402867 - GR 89 -7.3 -5.00884 | ACGCTCCCCAAAAAA TCCCTCT GCC AGAGAGA CCGGTCTGTTTCACG YPTB2876 3404409 - 3402973 - | two-component system sensor kinase TERM 3615 3403585 - 3403613 + g 70 -2.4 -4.90266 | gap 2, overlap 3403588 ATCGGCCAAGAGCTC CGTCCCTTCACGCA TAC TG-GCG-AGGGGCG TTTTTAATTCATGGG TERM 3616 3404549 - 3404528 - H 100 -8.1 -6.25741 | gap 1, opp_overlap 3404528 AAATAACAAAAAAAA GCAC-TTGCT GCG AGCAAAGTGC TTTTTTTAAAGGTTG TERM 3617 3404528 - 3404549 + H 100 -8.1 -5.43866 | gap 1, opp_overlap 3404528 AAATAACAAAAAAAA GCAC-TTGCT GCG AGCAAAGTGC TTTTTTTAAAGGTTG TERM 3618 3404736 - 3404703 - H 80 -9.8 -3.617 | gap 2, opp_overlap 3404703, overlap 3404701 3404711 3404723 ATAGACAACTAAACA TTGATCAACGGGGCAA TAAA TTGCCCCGTTG--CAA GAATATGTGGATGCC TERM 3619 3404730 - 3404711 - H 100 -13.6 -3.23638 | opp_overlap 3404703, overlap 3404703 3404701 3404723 CTAAACATTGATCAA CGGGGCAA TAAA TTGCCCCG TTGCAAGAATATGTG YPTB2877 3405604 - 3406164 + | hypothetical protein TERM 3620 3406447 - 3406433 - f 73 -8.6 -3.68222 | TTTTAAGGTCAACAA CAAGTC AGT GACTTG GATGACAACGGTTAT YPTB2878 3406487 - 3407065 + | hypothetical protein TERM 3621 3407146 - 3407118 - T 70 -2.6 -5.06411 | gap 1, overlap 3407125 ATAAAATAAAATAAA CTATATACCCAAA ATAA TTTGAGT-TACAG AAAAGCAACAAGGGA TERM 3622 3407282 - 3407260 - T 90 -11.4 -3.60597 | overlap 3407258 3407263 ATAAATTGATAAAGA GAAGGGTATC TTC AATACCCTTC AGACTGCTGACAAAC TERM 3623 3407279 - 3407263 - T 72 -7.3 -3.91369 | overlap 3407260 3407258 AATTGATAAAGAGAA GGGTATC TTC AATACCC TTCAGACTGCTGACA TERM 3624 3407369 - 3407343 - T 84 -10.1 -3.82218 | gap 1, opp_overlap 3407352, overlap 3407344 3407359 3407360 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGAA TGGCGCGG-CTC GAGCCTACATGGATG TERM 3625 3407370 - 3407344 - T 72 -10.1 -2.88849 | gap 1, opp_overlap 3407352, overlap 3407343 3407359 3407360 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGAA TGGCGCGGCTCG AGCCTACATGGATGT purL 3411372 - 3407482 - | phosphoribosylformylglycinamidine synthase TERM 3626 3408425 - 3408438 + g 70 -8.1 -3.95073 | opp_overlap 3408424 3408425, overlap 3408424 TCTGCCCACCACAAG CGCAG AGTG CTGCG TTTCTCGCTGTACAC TERM 3627 3409386 - 3409427 + g 74 -2.9 -5.0538 | gap 1, opp_overlap 3409391 TCTGATCACGGGTGA CCATACCGGTTACCGTGCGG TCG CCG-ATGGTGATCAGGAAGG TTTTTTCCGCTACCG TERM 3628 3410083 - 3410094 + g 75 -5.8 -4.60487 | overlap 3410076 CAATTTGGCCCCCAC GGTG ATTT CACC TTTTTGCACATGATC TERM 3629 3413084 - 3413068 - g 100 -6.5 -5.69068 | overlap 3413079 GAAAAAGAGAAAAAA GCGGC TCAACAT GCCGC CATTGAGGCGGAGCT YPTB2880 3411607 - 3413148 + | putative transglycosylase TERM 3630 3413259 - 3413229 - T 79 -11 -3.18912 | overlap 3413230 TGATTTAGTCACCAA CCGCCGCCCGTCAT AAC ATGCTGGGCGGCGC ATCACCTGGCCGCCG TERM 3631 3413258 - 3413230 - T 100 -14.5 -2.51133 | overlap 3413229 GATTTAGTCACCAAC CGCCGCCCGTCAT AAC ATGCTGGGCGGCG CATCACCTGGCCGCC YPTB2881 3413838 - 3413275 - | tRNA-specific adenosine deaminase yfhB 3414595 - 3413948 - | hypothetical protein murQ 3415757 - 3414870 - | N-acetylmuramic acid-6-phosphate etherase TERM 3632 3416288 - 3416275 - g 71 -4.5 -4.5442 | overlap 3416276 TGCTGAACGAGAAAA CCGCA GCAC TGCGA GCAACCCTAGACATT YPTB2884 3415965 - 3416804 + | putative DNA-binding transcriptional regulator fdx 3416966 - 3417226 + | putative [4Fe-4S] ferredoxin TERM 3633 3417303 - 3417279 - T 75 -5.8 -4.68593 | gap 1, opp_overlap 3417279 CCCAGTATGCAAAAA GGGATG-GCAT TTCC ATACCCATCCC TTAAATTTTCGGCTA acpS 3417712 - 3417332 - | 4'-phosphopantetheinyl transferase pdxJ 3418443 - 3417712 - | pyridoxal phosphate biosynthetic protein PdxJ recO 3419327 - 3418602 - | DNA repair protein RecO TERM 3634 3419186 - 3419173 - G 73 -8.1 -4.12599 | opp_overlap 3419173 AATAACGGCGTAAAA GGCTG CAAG CAGCC TTTTAAATTGGAACG TERM 3635 3419173 - 3419186 + g 75 -8.1 -4.27316 | opp_overlap 3419173 AATAACGGCGTAAAA GGCTG CAAG CAGCC TTTTAAATTGGAACG era 3420248 - 3419337 - | GTP-binding protein Era rnc 3420925 - 3420245 - | ribonuclease III lepB 3422275 - 3421277 - | lsignal peptidase I lepA 3424084 - 3422285 - | GTP-binding protein LepA TERM 3636 3424080 - 3424093 + g 77 -3.9 -5.01497 | AAGTTTCTTATGTGC TTCAT TTAT ATGAA TTTTTCTCTAGTCGT TERM 3637 3424564 - 3424544 - H 75 -8.3 -3.80733 | GTGATTTTATAATAA CCAAGTGAA ATA TTCTCTTGG CGGTAACGAGGAGAG YPTB2893 3424584 - 3425351 + | hypothetical protein rseC 3425913 - 3425458 - | SoxR reducing system protein RseC TERM 3638 3425534 - 3425544 + g 71 -6.8 -4.26076 | CTGAGCCCCTCAATT CTGG TTG CCAG TTTTCGTGCCAGTAA rseB 3426866 - 3425910 - | periplasmic negative regulator of sigmaE TERM 3639 3426777 - 3426810 + g 91 -13.3 -3.59979 | gap 1, opp_overlap 3426779 GCCCATTTCCTGCAA CATTGCTATCGGCGTA GAT TCCGCCGA-AGCAATG TTTGCCATGAACAGG TERM 3640 3426808 - 3426779 - G 72 -10.1 -3.02144 | gap 1, opp_overlap 3426777 CCATTTCCTGCAACA TTGCTATCGGCGTA GAT TCCGCCGA-AGCAA TGTTTGCCATGAACA rseA 3427522 - 3426866 - | anti-RNA polymerase sigma factor SigE rpoE 3428123 - 3427548 - | RNA polymerase sigma factor RpoE TERM 3641 3428473 - 3428483 + G 70 -2.4 -4.91109 | overlap 3428462 AAAGGGCCTCTTAAT GAGG GAG CCAC TTTTTATGCTCAGGG TERM 3642 3429731 - 3429721 - g 74 -6.8 -4.46212 | GTCCGTACCACAAAA CGCT TAG AGCG GGCTTTACGGCGCAT TERM 3643 3429787 - 3429821 + G 74 -10.8 -2.79183 | opp_overlap 3429777 3429775 GAATATTATGCCAAT TTCCGTATCTCCAATA ACC TGCTGGAGTTACGGAA TCTGGTACAAGTCGC nadB 3428311 - 3429948 + | L-aspartate oxidase TERM 3644 3429994 - 3429970 - T 79 -11.4 -2.56539 | overlap 3429969 3429967 CTGAATCCATAAGAT TGAGGGCGTC TCTAC GACGCCCGCA GACTGCTGACAAACC TERM 3645 3430080 - 3430054 - T 84 -10.1 -3.82218 | gap 1, overlap 3430055 3430070 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATAGATG TERM 3646 3430081 - 3430055 - T 72 -10.1 -2.88849 | gap 1, overlap 3430054 3430070 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATAGATGT TERM 3647 3430156 - 3430179 + T 83 -8.9 -4.08958 | gap 1, opp_overlap 3430155 ACTTTGTCAATAACC TCAGGGCGTC TCTAC GACGCCC-GA TTCTTATTTCACGCT YPTB2899 3430989 - 3430231 - | hypothetical protein TERM 3648 3431463 - 3431448 - g 78 -5.4 -5.00616 | gap 1 TTCCCCCGCAAAAAA TCCG-GG CCA CCGCGGA TCCTGATCCTGACGC srmB 3431229 - 3432554 + | ATP-dependent RNA helicase SrmB TERM 3649 3432575 - 3432592 + T 74 -4.8 -4.78237 | opp_overlap 3432570, overlap 3432570 3432563 TGCACGACAACAAAG CCGCTG CTCACA TAGCGG TTTTGTTGTCAGATA yplB 3433341 - 3432685 - | putative phospholipase A accessory protein yplA 3434381 - 3433419 - | phospholipase A TERM 3650 3434511 - 3434496 - R 100 -10.4 -5.1675 | opp_overlap 3434494 TCAGGCATGAAAAAA GGGGAC CGAA GTCCCC TATCACTTTATGATT YPTB2903 3434943 - 3434560 - | autonomous glycyl radical cofactor GrcA TERM 3651 3435057 - 3435070 + H 73 -3.9 -5.0133 | overlap 3435056 AGCCCCTACCATTCT TTGAT TCAA ATCAA TTTTTTCACCACATC ung 3435296 - 3435982 + | uracil-DNA glycosylase TERM 3652 3436034 - 3436061 + T 82 -10.6 -3.62597 | gap 1 GGACGTTGTCTGCAA CCTCACGCCA-CC TTC GGCTGCCGTGAGG TTATTGGAAGATCAG pcp 3436720 - 3436073 - | pyrrolidone-carboxylate peptidase YPTB2906 3437749 - 3436730 - | hypothetical protein YPTB2907 3438477 - 3437746 - | hypothetical protein TERM 3653 3437885 - 3437859 - G 73 -7.3 -4.15841 | gap 1, overlap 3437860 TCAGGAAAGCACAAA TCGCGGT-TGGG ATCC CCCACAGCGCGA TATGCAATGGTTCCG YPTB2908 3439338 - 3438562 - | hypothetical protein YPTB2909 3440246 - 3439296 - | hypothetical protein YPTB2910 3440896 - 3440240 - | putative carboxylase TERM 3654 3441493 - 3441473 - R 100 -13.3 -2.9518 | overlap 3441465 TGTAAGACGGAGACA CGCCGATGC TAA ACATCGGCG AAAATAGCCCTATCC YPTB2911 3442261 - 3441515 - | putative hydrolase-oxidase YPTB2912 3443472 - 3442435 - | putative 3',5'-cyclic-nucleotide phosphodiesterase phrB 3444926 - 3443463 - | deoxyribodipyrimidine photolyase TERM 3655 3444315 - 3444283 - G 74 -4 -4.91109 | opp_overlap 3444292, overlap 3444284 3444292 TGTTCACGACAAAAA CGGCGTAAACGCTG TAAGG CAGCGTCTTCCCCT GCAGGAAATAACTGG YPTB2914 3445538 - 3445056 - | hypothetical protein TERM 3656 3445900 - 3445876 - R 100 -12.1 -5.16237 | AAGCGCATTAAAAAA GCCCGTGGGCA TGA TACTCACGGGC CAGCTATTTTTTGTA ybfA 3446158 - 3445952 - | hypothetical protein TERM 3657 3445996 - 3446010 + g 73 -3.5 -4.84359 | ATTGGGTCAGCCAAA CCGGT TTATC ACTGG TTTTTATCCAGATAC TERM 3658 3446384 - 3446364 - H 71 -6.9 -4.12225 | opp_overlap 3446363 3446366 AATTAGCAAACCAAA TACATTCAC CCG GTGAAAGTA AGTTTCACAAACCAA TERM 3659 3446711 - 3446727 + G 81 -7.9 -4.60924 | TGTTGTTCGTGTTGT CCCGTCC GTT GGGTGGG TTTTTAGCACGTTTG TERM 3660 3447411 - 3447427 + G 78 -5.1 -4.92783 | TGCATTCAGTAATTT TGTCCAA ATG TTGGCCA TTTTTCTGATCCCTT TERM 3661 3447562 - 3447574 + G 72 -10.5 -2.93447 | overlap 3447561 ATGTACGCCGAACTG GCGGG AAA CCCGC ATTTATCCCCGTTAG TERM 3662 3448214 - 3448230 + G 73 -8 -4.03204 | overlap 3448203 3448225 GTAACGGCACCCTGC CAACGG GTGGG CCGTTG TTTATCGGTTTACTG kdpA 3446653 - 3448341 + | potassium-transporting ATPase subunit A TERM 3663 3449188 - 3449222 + G 83 -9.2 -4.40298 | opp_overlap 3449188, overlap 3449190 GTGGAGGCCAGCCAA GCCGGTAGCCCGGTGA CCA TCACCGTGCTAGTCGC TTTATTGGTTTGCCT TERM 3664 3449190 - 3449221 + G 73 -10.2 -3.23094 | gap 1, opp_overlap 3449188, overlap 3449188 GGAGGCCAGCCAAGC CGG-TAGCCCGGTGA CCA TCACCGTGCTAGTCG CTTTATTGGTTTGCC kdpB 3448435 - 3450501 + | potassium-transporting ATPase subunit B TERM 3665 3450635 - 3450608 - f 71 -9.8 -2.72855 | opp_overlap 3450607 3450608, overlap 3450610 TAAACCGTTTAACCA CAGCCATCGCAC CCTG ATGCGGTGGCCG GTTTTAAGACACAAA TERM 3666 3450840 - 3450824 - g 82 -12.3 -3.25942 | ATGTTTTCACAGCAA GCCAGTG GTT CACTGGC GCGACTGGGCGATAA kdpC 3450665 - 3451315 + | potassium-transporting ATPase subunit C TERM 3667 3452674 - 3452701 + G 70 -9.8 -3.2657 | overlap 3452653 3452669 CCGCTGGCCTTCAGT GCTGGCGGCGGT GATT AATGTCGCCAGC TTCGATCTGTTTTTT TERM 3668 3452864 - 3452838 - g 75 -8 -4.15565 | opp_overlap 3452828 GCTATCAGGCTAAAA TTGCCCGTTATC GGG AACAACGGGCCA GACATCTGTATGAAA TERM 3669 3453946 - 3453960 + G 75 -3.5 -5.08255 | opp_overlap 3453943, overlap 3453945 GAAGCGTCAAGAGGG CGGAG CCAGC TTCCG TTTTGTTTTGCCACT kdpD 3451325 - 3454051 + | sensor protein KdpD TERM 3670 3454076 - 3454066 - f 82 -6.8 -4.77567 | overlap 3454067 AGGTTTATAACAAAA TGCC CGC GGCA GACAGAATAACGAAG kdpE 3454592 - 3455221 + | DNA-binding transcriptional activator KdpE YPTB2921 3455316 - 3455744 + | BAT family (DMT superfamily) transporter TERM 3671 3455809 - 3455826 + T 100 -11.3 -4.8622 | opp_overlap 3455802 3455812 TAAATTAATCTTAGA TGACCGC CTGA GCGGTCA TTTTTAATTGCGCCA YPTB2922 3456114 - 3455872 - | hypothetical protein TERM 3672 3456322 - 3456306 - R 75 -3 -5.11836 | ACATTCAAAATAAAA CCATAC ATTAA ATATGG AATTGGCATCCAATA TERM 3673 3456410 - 3456433 + r 86 -11.8 -3.16564 | gap 1, opp_overlap 3456410 AAAACACATAAAAAA TCCGGCAACAG AGC CTGT-GCCGGA TTGATCGAGTGCCAA TERM 3674 3456433 - 3456410 - R 100 -11.8 -5.53079 | gap 1, opp_overlap 3456410 AAAACACATAAAAAA TCCGGCAACAG AGC CTGT-GCCGGA TTGATCGAGTGCCAA pgm 3458173 - 3456488 - | phosphoglucomutase seqA 3458731 - 3458204 - | replication initiation regulator SeqA TERM 3675 3458491 - 3458480 - G 73 -7.2 -4.27467 | opp_overlap 3458476 TAATACCAACATAAA GCGG TTAA CCGC CCTACTCTGTTCTGC YPTB2925 3459226 - 3459594 + | hypothetical protein TERM 3676 3459640 - 3459669 + F 100 -15.9 -2.91065 | opp_overlap 3459645, overlap 3459642 3459645 3459661 AGTCGCCTCTTGTAG GATAATGCCCCTA AAAA TGGGGGCATTATC TGTGATGTCTATGAT TERM 3677 3459642 - 3459667 + F 93 -12.7 -3.00259 | opp_overlap 3459645, overlap 3459640 3459645 3459661 TCGCCTCTTGTAGGA TAATGCCCCTA AAAA TGGGGGCATTA TCTGTGATGTCTATG TERM 3678 3459645 - 3459664 + F 80 -10 -3.63762 | opp_overlap 3459645, overlap 3459642 3459640 3459661 CCTCTTGTAGGATAA TGCCCCTA AAAA TGGGGGCA TTATCTGTGATGTCT YPTB2926 3459706 - 3459882 + | hypothetical protein TERM 3679 3459915 - 3459904 - T 70 -3.6 -4.8143 | TTAACAATCTAAAAA CGAC CCCA GCCG ATAACCACGTTGCGC YPTB2927 3460650 - 3459889 - | hypothetical protein celD 3461532 - 3460702 - | DNA-binding transcriptional regulator ChbR TERM 3680 3461216 - 3461186 - G 83 -6.8 -4.98061 | overlap 3461189 ATATAGGAAAGAAAA TCACCTCTTAAGCG ATA CGCCTGAGAGGCCA CAATAGGCCGAGACA TERM 3681 3461213 - 3461189 - G 78 -10.7 -3.34291 | overlap 3461186 TAGGAAAGAAAATCA CCTCTTAAGCG ATA CGCCTGAGAGG CCACAATAGGCCGAG celC 3461928 - 3461581 - | N,N'-diacetylchitobiose-specific PTS system transporter subunit IIA celA 3463785 - 3463468 - | N,N'-diacetylchitobiose-specific PTS system transporter subunit IIB TERM 3682 3465112 - 3465094 - g 74 -11 -2.92668 | overlap 3465104 CAGTATGCAATTAGA TGCGGCCA AAC TGGCCACA GCCCGAGGCAGAGCA ccrB 3464825 - 3465205 + | camphor resistance protein CrcB ccrB 3465221 - 3465625 + | camphor resistance protein CrcB TERM 3683 3465662 - 3465683 + T 75 -7.3 -4.34402 | opp_overlap 3465662 TCGTGACAAAAAAAA CACCCTC ACTTAACC GAGGGTG TTTTGATATAAACAC TERM 3684 3465683 - 3465662 - T 100 -8 -5.93809 | opp_overlap 3465662 TCGTGACAAAAAAAA CACCCTCA CTTAAC CGAGGGTG TTTTGATATAAACAC kch 3466898 - 3465723 - | voltage-gated potassium channel hdeB 3467517 - 3467846 + | acid-resistance protein TERM 3685 3467890 - 3467931 + T 91 -10.3 -4.20918 | opp_overlap 3467894, overlap 3467892 3467894 3467914 TATGTAACCTGTAAA AAAAGACACTCATTAAGCG TTAT CGGTTAATGAGTGTCTCTA TTTATTAGCCTTCCC TERM 3686 3467892 - 3467929 + T 100 -12.9 -3.70139 | opp_overlap 3467894, overlap 3467890 3467894 3467914 TGTAACCTGTAAAAA AAGACACTCATTAAGCG TTAT CGGTTAATGAGTGTCTC TATTTATTAGCCTTC TERM 3687 3467927 - 3467894 - T 100 -15.5 -5.43866 | opp_overlap 3467892 3467890 3467894 3467914 TAACCTGTAAAAAAA GACACTCATTAAGCG TTAT CGGTTAATGAGTGTC TCTATTTATTAGCCT TERM 3688 3467894 - 3467927 + T 100 -15.5 -3.4214 | opp_overlap 3467894, overlap 3467892 3467890 3467914 TAACCTGTAAAAAAA GACACTCATTAAGCG TTAT CGGTTAATGAGTGTC TCTATTTATTAGCCT YPTB2936 3469069 - 3468011 - | nickel transport (NiCoT family) protein TERM 3689 3468240 - 3468223 - G 71 -7 -3.99091 | opp_overlap 3468220 TAAAGAAAGCAATAA TCACCG ACGCAG CGGTGA TAGTGATATTGTAAT TERM 3690 3469110 - 3469142 + r 73 -10 -2.93853 | gap 1, overlap 3469106 CCTACCCGTTCTGAC CTGGCGTTATCGCTG ACAA CA-CGATAACGCCAA TAATTTGAGGTCTAT YPTB2937 3470210 - 3469218 - | putative urea transporter TERM 3691 3470100 - 3470076 - G 71 -4.3 -4.72986 | opp_overlap 3470079 3470082 TATTGCGATGAAAAA GAATAGCCC GGTCAAT GGGTTATTC TGAAACATTACCTGA TERM 3692 3470339 - 3470318 - R 84 -10.1 -3.86346 | overlap 3470319 3470321 TCACTGGCTGATAAA CGAGGCTGG GTAC CCAGCCTCT CAGACTGCTGACAAA TERM 3693 3470338 - 3470319 - R 100 -13.6 -2.91593 | overlap 3470318 3470321 CACTGGCTGATAAAC GAGGCTGG GTAC CCAGCCTC TCAGACTGCTGACAA TERM 3694 3470336 - 3470321 - R 76 -10.4 -3.00946 | overlap 3470319 3470318 CTGGCTGATAAACGA GGCTGG GTAC CCAGCC TCTCAGACTGCTGAC TERM 3695 3470427 - 3470401 - R 84 -10.1 -3.8647 | gap 1, overlap 3470402 AGGCAGGAGAGTAAA GCGTCCGCGCCA CGGA TGGCGCGG-CTC GAGCCCCCAGGGATG TERM 3696 3470428 - 3470402 - R 73 -10.1 -2.914 | gap 1, opp_overlap 3470427, overlap 3470401 GGCAGGAGAGTAAAG CG-TCCGCGCCA CGGA TGGCGCGGCTCG AGCCCCCAGGGATGG TERM 3697 3470506 - 3470525 + r 100 -13.6 -3.09327 | overlap 3470508 TTGTCAATAACCTCC GAGGCTGG GTAC CCAGCCTC TATTCAATAGACTGA TERM 3698 3470508 - 3470523 + r 77 -10.4 -3.10522 | overlap 3470506 GTCAATAACCTCCGA GGCTGG GTAC CCAGCC TCTATTCAATAGACT ureD 3471554 - 3470589 - | urease accessory protein TERM 3699 3471162 - 3471182 + g 72 -6.2 -4.431 | overlap 3471151 GATCTGCGAGGCGTA GTTCGCAT TCATC ATGTGAAC TTTTGTGGCTGACTG ureG 3472213 - 3471551 - | urease accessory protein ureF 3473026 - 3472340 - | urease accessory protein ureE 3473743 - 3473048 - | urease accessory protein UreE ureC 3475757 - 3474039 - | urease subunit alpha TERM 3700 3475143 - 3475131 - G 73 -10.5 -3.14211 | opp_overlap 3475129, overlap 3475117 AGCCTGTTCCAGCAA CGGGC CGC GCCCG TATGAATTACCTTTC ureB 3476281 - 3475847 - | urease subunit beta ureA 3476636 - 3476334 - | urease subunit gamma YPTB2945 3478500 - 3477835 - | ABC nickel/di-oligopepetide transporter, ATP binding subunit YPTB2946 3479299 - 3478493 - | ABC nickel/di-oligopepetide transporter, ATP binding subunit YPTB2947 3480105 - 3479299 - | ABC nickel/di-oligopepetide transporter, permease subunit YPTB2948 3481085 - 3480102 - | ABC nickel/di-oligopepetide transporter, permease subunit YPTB2949 3482647 - 3481070 - | ABC transporter, periplasmic nickel/di-oligopepetide binding protein TERM 3701 3481576 - 3481589 + g 73 -2.3 -5.05601 | ACCAAAGCGTTATCT TAGCC GGTA GGCCA TTTTTCTCTCTGATG TERM 3702 3482604 - 3482593 - G 79 -2.2 -5.36441 | CTGGGACAGAAAAAA CGCT CAAT AACG CAGTTGCCACCAAGG TERM 3703 3483397 - 3483380 - R 100 -9.1 -6.25741 | opp_overlap 3483379 3483380 AAATAATAAAAAAAA CCCCGTC AAAA GACGAGG CTTCTAAATCTATTT cspB 3483655 - 3483443 - | cold shock protein YPTB2951 3484163 - 3484501 + | hypothetical protein TERM 3704 3484798 - 3484780 - g 73 -2.4 -5.10933 | opp_overlap 3484780, overlap 3484781 CTACTGAAAATAAAA CCGATTTA TAT TGAATCGA TGTTGCAAGAGATGG yicN 3484666 - 3485115 + | hypothetical protein YPTB2953 3485548 - 3485213 - | hypothetical protein TERM 3705 3485987 - 3485968 - R 100 -9.3 -5.63504 | opp_overlap 3485970 AAGCTTATAAAAAAA CACCCAC AATTAA GTGGGTG ATTGGGATTAACCTG asr 3486392 - 3486027 - | acid shock protein precursor TERM 3706 3486079 - 3486104 + g 90 -9 -4.63527 | gap 1, overlap 3486081 3486082 TTATGGTGCTTTTTC GCTGCCTGTGC TTTTT GCACGGGC-GC TTTTTGAACTGATGC nrdH 3486897 - 3487133 + | putative glutaredoxin nrdI 3487147 - 3487551 + | ribonucleotide reductase stimulatory protein TERM 3707 3488972 - 3488985 + G 85 -5.9 -5.03314 | CCTGCACGGTTATCT GGCGC GGGA GCGTC TTTTTTACGGCTCGG nrdE 3487533 - 3489683 + | ribonucleotide-diphosphate reductase subunit alpha nrdF 3489790 - 3490761 + | ribonucleotide-diphosphate reductase subunit beta TERM 3708 3490843 - 3490827 - f 80 -3.5 -5.37043 | ATTCTAGATAAAAAA GGGGGAG ACT CAGCCCC AATAGGCAGTTAGCC proV 3491437 - 3492636 + | ABC glycine/betaine/L-proline transporter, ATP-binding subunit proV proW 3492629 - 3493795 + | glycine betaine transporter membrane protein TERM 3709 3494645 - 3494632 - g 79 -2.3 -5.4505 | overlap 3494634 GTGGCGAACAAAAAA TGGGC TGAA GCCAA TCCGGCAGCCGCCAA proX 3493843 - 3494847 + | glycine betaine transporter periplasmic subunit TERM 3710 3494879 - 3494860 - T 77 -6.5 -4.7033 | TAAGTTAAGAGAAAA CAGATAC TTTCGG GTATCTG TGAGGTTATTGACAA TERM 3711 3494957 - 3494983 + T 72 -10.1 -2.88849 | gap 1, opp_overlap 3494946, overlap 3494952 3494958 ACATCCATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCTCTGCC TERM 3712 3494958 - 3494984 + T 84 -10.1 -3.82218 | gap 1, opp_overlap 3494946, overlap 3494952 3494957 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCTCTGCCT TERM 3713 3495047 - 3495066 + T 91 -7.2 -5.28176 | overlap 3495031 3495028 3495043 TTGTCAGCAGTCTGA CAGATACT TTCG GGTATCTG TTTTTTATCCCTACC YPTB2962 3496027 - 3495077 - | hypothetical protein YPTB2963 3496321 - 3497832 + | nucleobase:cation symporter TERM 3714 3497852 - 3497878 + T 100 -15.3 -3.52113 | opp_overlap 3497852 AGCAGAAACGACAAA GCCCTGAGTTA TTACT TAACTCAGGGC TTCTAAATTTTGGCG TERM 3715 3497878 - 3497852 - T 100 -15.3 -4.18303 | opp_overlap 3497852 AGCAGAAACGACAAA GCCCTGAGTTA TTACT TAACTCAGGGC TTCTAAATTTTGGCG dnaQ 3498842 - 3498078 - | DNA polymerase III subunit epsilon TERM 3716 3499193 - 3499173 - g 73 -2.4 -5.11033 | overlap 3499174 3499175 CATAACTGGAAAAAA CGCGGCTG GAAAA CAGCCGAT CGCAAGCCAGTGCGC rnhA 3498912 - 3499376 + | ribonuclease H YPTB2966 3500150 - 3499431 - | hypothetical protein TERM 3717 3499573 - 3499599 + g 93 -8.7 -5.06414 | overlap 3499574 CATCCCAACGCAGGC AGGTGGGTACT GATAA AGTGCCCACCG TTTTTATTGAAGGGC TERM 3718 3499574 - 3499598 + g 88 -12.2 -3.63367 | overlap 3499573 ATCCCAACGCAGGCA GGTGGGTACT GATAA AGTGCCCACC GTTTTTATTGAAGGG TERM 3719 3500479 - 3500444 - g 75 -3.2 -5.07107 | overlap 3500446 3500467 GAAACTGCGAAAAAA GGGGCCACCGTCAT TGTTAATG ATGGCGATAGCCTC ACCATTGCCGGACAA gloB 3500195 - 3500950 + | putative hydroxyacylglutathione hydrolase TERM 3720 3501781 - 3501749 - g 80 -7 -4.58395 | TTTATGTTCCAAAAA TGCTGGCCTTGGGT GATTT ACTCAAGAACAGCA AAAAGTACGGTATAA mltD 3500983 - 3502410 + | membrane-bound lytic murein transglycosylase D TERM 3721 3502432 - 3502447 + T 100 -9 -5.71983 | opp_overlap 3502432 AATCACTGTCAAAAA GCACCT TTCG AGGTGC TTTTTTTATGGTTGG TERM 3722 3502447 - 3502432 - T 100 -9 -4.60889 | opp_overlap 3502432 AATCACTGTCAAAAA GCACCT TTCG AGGTGC TTTTTTTATGGTTGG YPTB2969 3503214 - 3502453 - | hypothetical protein TERM 3723 3502563 - 3502549 - G 75 -3.4 -5.13354 | overlap 3502551 GCGATAAAAAATAAA GTCCAG AGG CCGGCC GAACGCACGACTGCG TERM 3724 3502956 - 3502940 - G 70 -2.2 -4.8622 | TGGGGCAATGAAAAA GCAGGT ACCTG ATCTGC GGCCTGATAGCTGGC YPTB2970 3504060 - 3503596 - | hypothetical protein TERM 3725 3504070 - 3504052 - G 100 -9.6 -5.83211 | CACCAAAATAAAAAA CCACCTCA ATG TAAGGTGG CTCGTCCAGTGTCTT dkgB 3504898 - 3504095 - | 2,5-diketo-D-gluconate reductase B TERM 3726 3505315 - 3505335 + r 100 -14.1 -4.14739 | opp_overlap 3505315 TATAAATGCAAAAAA CCCTGAATC TAA GATTCAGGG TTTTGCAATAAGTGG TERM 3727 3505335 - 3505315 - R 100 -14.1 -5.24449 | opp_overlap 3505315 TATAAATGCAAAAAA CCCTGAATC TAA GATTCAGGG TTTTGCAATAAGTGG TERM 3728 3505770 - 3505760 - R 74 -6.8 -4.27316 | opp_overlap 3505760 TCTCTCAATTCAAAA CACC TTC GGTG TTGTAAGGTTAAGCC TERM 3729 3506882 - 3506893 + r 74 -4.4 -5.06816 | CCACTTTCGTGTTTG CACA GTGC TGTG TTTTTATTAAACAGT TERM 3730 3506929 - 3506955 + r 70 -9.4 -2.75844 | opp_overlap 3506905 3506907, overlap 3506928 3506931 CCAGCTGGTATCTGC GACTGGCTTCAG CTC CAGGAGCTAGTC CTTTCACCTAACGCC TERM 3731 3507389 - 3507407 + r 82 -10.3 -3.57798 | overlap 3507382 CTTGGTCTTCCGGCG TGCGGGT TTTTC ACCCGCA TTATCGTTACTTATG TERM 3732 3508845 - 3508882 + r 78 -5.7 -4.7629 | opp_overlap 3508839 3508845 3508848, overlap 3508848 ATTGTTAAAGAGCAA TATCGTAAACACGACTT GGTA AAGTCATCTTTACGTTA TTTTTCAGTTCATAA TERM 3733 3508848 - 3508879 + r 78 -7.4 -4.47888 | opp_overlap 3508845 3508839 3508848, overlap 3508845 GTTAAAGAGCAATAT CGTAAACACGACTT GGTA AAGTCATCTTTACG TTATTTTTCAGTTCA YPTB2972 3511696 - 3511130 - | D,D-heptose 1,7-bisphosphate phosphatase metN 3511883 - 3512914 + | DL-methionine transporter ATP-binding subunit TERM 3734 3513325 - 3513314 - g 71 -4.4 -4.79223 | GCAGATCATCAAAAA GGTA TTAT TACC AGAAGCCCTGCCCGG YPTB2974 3512907 - 3513560 + | DL-methionine transporter permease subunit metQ 3513624 - 3514439 + | DL-methionine transporter substrate-binding subunit TERM 3735 3514472 - 3514495 + F 100 -16.8 -3.97674 | opp_overlap 3514475, overlap 3514475 TATTGAATATATCGA CAAGACGGGC TATA GCCCGTCTTG TTATTTGAATAATAG TERM 3736 3514475 - 3514492 + F 100 -12.7 -4.10744 | opp_overlap 3514475, overlap 3514472 TGAATATATCGACAA GACGGGC TATA GCCCGTC TTGTTATTTGAATAA TERM 3737 3514492 - 3514475 - f 100 -12.7 -3.42583 | opp_overlap 3514475 3514472 TGAATATATCGACAA GACGGGC TATA GCCCGTC TTGTTATTTGAATAA rcsF 3514557 - 3514964 + | outer membrane lipoprotein TERM 3738 3515037 - 3515017 - g 74 -3.9 -4.99645 | overlap 3515019 ACCGTATAAAGAAAA GTTTGCGGT ACC ACGGCAACC CGGTTTGGTTGAGGA YPTB2977 3514961 - 3515668 + | hypothetical protein TERM 3739 3517426 - 3517415 - g 85 -5.8 -5.09762 | AGTGGAATACAAAAA CCGA CGCG TCGG TGAAAAACAAATGAT proS 3515772 - 3517490 + | prolyl-tRNA synthetase TERM 3740 3517566 - 3517601 + T 76 -7.7 -4.23999 | gap 2, opp_overlap 3517569 GGGTATTTTACTGAT GAAGCCGC-CGG-AG AACTTGAA CTGCCGTGCGGCTTC TTATTTTAGCTATGG cutF 3518307 - 3517624 - | lipoprotein involved with copper homeostasis and adhesion YPTB2980 3518832 - 3518392 - | hypothetical protein TERM 3741 3518820 - 3518845 + g 74 -9.1 -3.6445 | overlap 3518821 3518823 ACACACTTATTGCCC GTAGTTTTGCC ATTC GGCAAAACTAA TTTCCAGATTATTCT TERM 3742 3518821 - 3518844 + g 81 -12.6 -2.77947 | overlap 3518820 3518823 CACACTTATTGCCCG TAGTTTTGCC ATTC GGCAAAACTA ATTTCCAGATTATTC TERM 3743 3518823 - 3518842 + g 74 -10.8 -2.92935 | overlap 3518821 3518820 CACTTATTGCCCGTA GTTTTGCC ATTC GGCAAAAC TAATTTCCAGATTAT YPTB2981 3519425 - 3518811 - | hypothetical protein TERM 3744 3519765 - 3519750 - g 78 -11.8 -3.08679 | opp_overlap 3519751 CTCCGTTAGGGAACA GGCGGC CTAT GCCGCC GCTAACTTATTGGTG YPTB2982 3519601 - 3519801 + | hypothetical protein YPTB2983 3519788 - 3520048 + | Rho-binding antiterminator TERM 3745 3520063 - 3520098 + T 100 -17 -4.1043 | opp_overlap 3520070, overlap 3520070 GTTTCCACTTCCTTG TGAAAAACGGGTCGCT GAAG AGCGGCCCGTTTTGCA TTTATCCTATTTACA TERM 3746 3520091 - 3520070 - T 100 -11.5 -4.56597 | opp_overlap 3520063 3520070 CTTCCTTGTGAAAAA CGGGTCGCT GAAG AGCGGCCCG TTTTGCATTTATCCT TERM 3747 3520070 - 3520091 + T 100 -13.7 -4.40173 | opp_overlap 3520070, overlap 3520063 CTTCCTTGTGAAAAA CGGGTCGCT GAAG AGCGGCCCG TTTTGCATTTATCCT YPTB2984 3520619 - 3520302 - | putative cytochrome tilS 3522238 - 3520856 - | tRNA(Ile)-lysidine synthetase TERM 3748 3520996 - 3520976 - G 76 -9 -3.84185 | TTCACCGAAATATAA CAGCGGAA TACGT TCCCGCTG CCATGGGGGAATACC YPTB2986 3522638 - 3522240 - | hypothetical protein TERM 3749 3522799 - 3522777 - R 100 -5.5 -6.08563 | opp_overlap 3522777 3522785 3522790 AATAGATAAAAAAAA CCGGCGC TTAAATTCC GCACCGG CTTTTATCAGTTGGC accA 3523781 - 3522822 - | acetyl-CoA carboxylase carboxyltransferase subunit alpha TERM 3750 3523011 - 3523034 + g 78 -11 -3.31792 | CTTCAGTTCTTTTAG GCGATGTGCA GTAA TGCCCATCGC TTCTGCGGCTAATGG TERM 3751 3523698 - 3523726 + g 71 -6.8 -4.27584 | gap 1 ATCTAATTTTTCGTC TTGAC-GGCTGAC TGCA GTCAGCGAGTCAA TTTTCGCTTCCAGCT dnaE 3527309 - 3523794 - | DNA polymerase III subunit alpha TERM 3752 3524648 - 3524658 + g 75 -5.4 -4.8048 | opp_overlap 3524648 GTTTTTCTAAAATAC GCTT GTT AAGC TTTTTGGTATCGACA TERM 3753 3525106 - 3525129 + g 82 -5.2 -5.07486 | opp_overlap 3525106, overlap 3525108 TCTTCAAATACAGAA CGCTGCTTAG CCAT CTCAGCAGGG TTTTTCTTACCCATG TERM 3754 3525928 - 3525915 - G 71 -6.7 -4.25056 | overlap 3525919 GATCCGATCAACAAA GCCAT AGGG ATGGC CTAATACACGGCCGA TERM 3755 3526375 - 3526391 + g 75 -5.1 -4.82901 | overlap 3526376 AATTCCAAACGTTCT TCCAAAC CTT GTTTGGC TTTTTCTACCAGAAA rnhB 3528035 - 3527439 - | ribonuclease HII TERM 3756 3527860 - 3527888 + g 79 -2.3 -5.50499 | overlap 3527861 3527862 3527864 TCAGTGATTTCGTCA TACAGTGACAGGC GGC GCTTCTCGCTGAG TTTTTTTGAATCTGC lpxB 3529216 - 3528032 - | lipid-A-disaccharide synthase lpxA 3530008 - 3529220 - | UDP-N-acetylglucosamine acyltransferase fabZ 3530542 - 3530012 - | (3R)-hydroxymyristoyl-ACP dehydratase TERM 3757 3530577 - 3530565 - R 70 -2.7 -5.00616 | overlap 3530566 TTCCTGTCTAAAAAA CTGAT GCT ATCAA CAACACGGCCTGCAC lpxD 3531722 - 3530700 - | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase TERM 3758 3531673 - 3531641 - G 75 -11.4 -2.63823 | gap 1, overlap 3531629 3531638 3531637 AATGCATAGAAGCGA TGC-CGGTGATGACA AGAT CGCCATCACCGTGCA CCTGTGCATCCAACT ompH 3532274 - 3531726 - | periplasmic chaperone TERM 3759 3531844 - 3531862 + g 73 -4.6 -4.6759 | opp_overlap 3531839 3531844 ACAGATTTAACAGCA TCCTGA ATACGGC TCAGGA TTTTGTTACGCTCTT YPTB2995 3534768 - 3532381 - | outer membrane protein assembly factor YaeT TERM 3760 3533758 - 3533768 + g 73 -5.4 -4.49311 | overlap 3533739 ATCCACGTTGATATG CAGT TTA ACTG TTTTATCGTCATCAT YPTB2996 3536160 - 3534805 - | zinc metallopeptidase cdsA 3537037 - 3536189 - | CDP-diglyceride synthase uppS 3537805 - 3537047 - | undecaprenyl pyrophosphate synthetase TERM 3761 3537562 - 3537550 - G 82 -5.5 -5.06414 | GTGCTCGAACAAAAA GCTCC ATC AGAGC GGTCACTTCTTGGTC TERM 3762 3537894 - 3537875 - R 100 -8.6 -5.63504 | gap 1, opp_overlap 3537875, overlap 3537887 AAGTGCACAAAAAAA GCCGTGTAC CAA GT-CACGGC TTCTGGAGTGACAGC dxr 3539225 - 3538029 - | 1-deoxy-D-xylulose 5-phosphate reductoisomerase TERM 3763 3539424 - 3539395 - R 100 -11.5 -5.44721 | gap 1, opp_overlap 3539400, overlap 3539400 ATGACCGGAAAAAAA GCA-AAGCGCCGCC TAA GGCGACGCTTATAC AATGCGAGTAGAGAT TERM 3764 3539418 - 3539400 - R 100 -13.8 -4.5187 | opp_overlap 3539400, overlap 3539395 CGGAAAAAAAGCAAA GCGCCGCC TAA GGCGACGC TTATACAATGCGAGT TERM 3765 3539400 - 3539418 + r 86 -11.6 -3.32963 | opp_overlap 3539400 3539395 CGGAAAAAAAGCAAA GCGCCGCC TAA GGCGACGC TTATACAATGCGAGT frr 3539996 - 3539439 - | ribosome recycling factor pyrH 3540857 - 3540132 - | uridylate kinase TERM 3766 3540173 - 3540191 + g 72 -5.8 -4.33153 | opp_overlap 3540175, overlap 3540175 TCTCACCCATCACCA CACGACGC AAA GCGCCGGG TTTATTCATGTTGAA TERM 3767 3540474 - 3540461 - G 75 -5.3 -4.72986 | TACCCGCAGCAAAAA TAACC ACAC GGTTA TGACGCAGCAAGCTA TERM 3768 3541056 - 3541033 - R 100 -12.4 -4.68384 | opp_overlap 3541033 ATCGAGTGAATAAAA TGGAACCGCC TATT GGCGGCCCCA TTTGGAGCATTAAGA TERM 3769 3541033 - 3541056 + r 70 -8 -3.57561 | opp_overlap 3541033 ATCGAGTGAATAAAA TGGAACCGCC TATT GGCGGCCCCA TTTGGAGCATTAAGA tsf 3541923 - 3541066 - | elongation factor Ts TERM 3770 3541995 - 3541977 - R 100 -16 -3.74792 | overlap 3541990 CATTAGATATGCAAA GGGGGCCT ATA AGGCCCCC CCTAACCAACATATT TERM 3771 3542059 - 3542071 + r 76 -7.7 -4.16842 | CGGACTTATTATTCA GCTTC TAC GAAGC TTTCTTCCGCCTGAA rpsB 3542777 - 3542052 - | 30S ribosomal protein S2 ampM 3543212 - 3544003 + | methionine aminopeptidase TERM 3772 3544013 - 3544027 + F 100 -12.8 -5.26316 | opp_overlap 3544007 3544013 GAGTAATAATGACAA GCCGGC ACC GCCGGC TTTTTTATGGGCTGC TERM 3773 3544027 - 3544013 - f 100 -12.8 -3.6216 | opp_overlap 3544013, overlap 3544007 GAGTAATAATGACAA GCCGGC ACC GCCGGC TTTTTTATGGGCTGC TERM 3774 3545125 - 3545107 - g 70 -2.3 -4.87291 | GAGGCGAATGAAAAA CCGCGTC CACTT GACGAAG AGTTTCAACTACGGG TERM 3775 3545948 - 3545938 - g 71 -4.6 -4.65895 | TTTGCGACCGAAAAA CAGC TAC GCCG CGGAATGCAAAATAG glnD 3544063 - 3546744 + | PII uridylyl-transferase dapD 3546919 - 3547743 + | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase TERM 3776 3547753 - 3547773 + F 100 -8.3 -5.53288 | opp_overlap 3547752 3547750 3547753 3547755 GACTAAGATTAAGAG TAGCGGG CTAACCA CCCGCTA TTTTTTTGCCTTACG TERM 3777 3548190 - 3548165 - g 79 -2.5 -5.46706 | ATTTGAAAAGAAAAA TTCTGGATGAC CTAC GTCACCTGGAA AGTGTTGTCACCAAT YPTB3007 3547867 - 3548256 + | hypothetical protein TERM 3778 3548325 - 3548290 - T 86 -12.1 -3.17194 | overlap 3548292 ACCTCGGTAACCGAA TACGTATTGTGACAA CGAAAC TTGCCACAATACGCA ATAAAATCAAGATAT TERM 3779 3548323 - 3548292 - T 93 -12.5 -3.14878 | overlap 3548290 CTCGGTAACCGAATA CGTATTGTGACAA CGAAAC TTGCCACAATACG CAATAAAATCAAGAT YPTB3008 3548795 - 3548346 - | flavodoxin YPTB3009 3549596 - 3548823 - | tRNA pseudouridine synthase C YPTB3010 3549928 - 3549596 - | hypothetical protein TERM 3780 3550103 - 3550080 - R 100 -12.5 -6.32976 | opp_overlap 3550077 3550072 3550080 AAAAAAACAAAAAAA GGGGTACTG TTTTAC CAGTACCCC TCAATTCGTTTTATA TERM 3781 3550080 - 3550103 + r 88 -12.5 -2.67189 | opp_overlap 3550080, overlap 3550077 3550072 AAAAAAACAAAAAAA GGGGTACTG TTTTAC CAGTACCCC TCAATTCGTTTTATA syd 3551171 - 3550620 - | SecY interacting protein Syd queF 3551303 - 3552148 + | 7-cyano-7-deazaguanine reductase TERM 3782 3552684 - 3552696 + G 83 -6.3 -4.90471 | GAGCTCCAGTCATTT GACTA ACC TAGTC TTTTCTATTTTACGT TERM 3783 3553314 - 3553337 + G 75 -10.3 -3.42354 | opp_overlap 3553312 3553314 3553317 GCCACTGGTGAAAGA GTATCGCCG TAATAC CGGCGATGC TTATAGCTTCAACTG YPTB3013 3552301 - 3553665 + | hypothetical protein TERM 3784 3553754 - 3553741 - f 75 -3.1 -5.1861 | TTGAGCAGCAAAAAA TGACA AATC TGCCA AGAGTAAATTTAAAT xni 3553925 - 3554680 + | exonuclease IX TERM 3785 3554718 - 3554695 - T 100 -13.2 -4.90455 | opp_overlap 3554699, overlap 3554696 ATATACGCATAAAAA CTAAGGGGCC AATA GGCCCCTTAA ATATGATGTTACGCT TERM 3786 3554717 - 3554696 - T 100 -14.5 -3.53188 | opp_overlap 3554699, overlap 3554695 TATACGCATAAAAAC TAAGGGGCC AATA GGCCCCTTA AATATGATGTTACGC TERM 3787 3554699 - 3554714 + T 86 -11.8 -3.16154 | opp_overlap 3554696 3554695 ACGCATAAAAACTAA GGGGCC AATA GGCCCC TTAAATATGATGTTA YPTB3015 3555851 - 3554745 - | putative RNA 2'-O-ribose methyltransferase YPTB3016 3556239 - 3555844 - | hypothetical protein TERM 3788 3555942 - 3555900 - G 72 -6.2 -4.46404 | opp_overlap 3555922 3555924, overlap 3555904 CAATCAACATCAAAA TCCATCCCGCCAGAAAACAG ACT CCGCCTACTGGCGTGATATA TATCCACAGTCTCAG TERM 3789 3556211 - 3556199 - G 100 -9.1 -5.47431 | GCAACATAGAAAAAA CCGCT CAG AGCGG AAAATATCAGCATTA gcvA 3557322 - 3556405 - | DNA-binding transcriptional activator GcvA TERM 3790 3557556 - 3557574 + H 84 -3.8 -5.54192 | opp_overlap 3557559, overlap 3557557 3557559 TCTGGTATGCCAGAC ATAGTAGC TAA GCTACTGC TTTTTTTCACTTCCT TERM 3791 3557557 - 3557573 + H 72 -7.3 -3.90888 | opp_overlap 3557559, overlap 3557556 3557559 CTGGTATGCCAGACA TAGTAGC TAA GCTACTG CTTTTTTTCACTTCC TERM 3792 3557627 - 3557647 + H 100 -9.7 -6.00086 | TAGTGATTTTATGCA GCACCGTTA TTT TGGCGGTGC TTTTTTTTATCCTAT YPTB3018 3557929 - 3559248 + | cysteine sulfinate desulfinase YPTB3019 3559383 - 3559826 + | hypothetical protein YPTB3020 3560689 - 3559862 - | hypothetical protein TERM 3793 3559954 - 3559943 - G 72 -5.8 -4.31895 | AGACACAGCAACAAA GCCA AACG TGGC AGTAACCATCGTTGC TERM 3794 3560778 - 3560793 + r 86 -11.8 -3.14211 | opp_overlap 3560778 AGTACTCATGCAAAA GCGGCC AACT GGCCGC TTAATCAAAACAAAT TERM 3795 3560793 - 3560778 - R 100 -11.8 -4.20084 | opp_overlap 3560778 AGTACTCATGCAAAA GCGGCC AACT GGCCGC TTAATCAAAACAAAT mltA 3562004 - 3560832 - | murein transglycosylase A TERM 3796 3560874 - 3560897 + g 73 -8.8 -3.86897 | gap 1 TGACGAATCATTACT GGTAGGCTCGC TCT GCGTGCC-ACC TTTATAAGCAGTGAA TERM 3797 3562708 - 3562721 + r 100 -8.1 -6.02919 | opp_overlap 3562708 GATATCATCATTAGA CACCC TATC GGGTG TTTTTTTGTTTCTGG YPTB3022 3564157 - 3562907 - | N-acetylmuramoyl-L-alanine amidase AmiC precursor argA 3564393 - 3565718 + | N-acetylglutamate synthase TERM 3798 3565836 - 3565859 + T 75 -8.8 -3.66772 | opp_overlap 3565837, overlap 3565837 TATTTGAAACAGATA ACTCAGGGCG CTTA TGCCCTGAGA TTATTGGCGATTTAA TERM 3799 3565837 - 3565858 + T 89 -12.3 -2.79581 | opp_overlap 3565837, overlap 3565836 ATTTGAAACAGATAA CTCAGGGCG CTTA TGCCCTGAG ATTATTGGCGATTTA TERM 3800 3565858 - 3565837 - T 95 -11.6 -3.76634 | opp_overlap 3565836 3565837 ATTTGAAACAGATAA CTCAGGGC GCTTAT GCCCTGAG ATTATTGGCGATTTA RecD 3567818 - 3565860 - | exonuclease V subunit alpha TERM 3801 3565974 - 3565958 - G 71 -6.5 -4.1552 | overlap 3565959 CATCGCTGCAATAAA GCGTCAG ATG CTGACGG GCGCGGGTAATGGCG RecB 3571477 - 3567815 - | exonuclease V subunit beta ptrA 3574362 - 3571474 - | protease III precursor TERM 3802 3572038 - 3572026 - G 74 -9.1 -3.61715 | GATCTGCCCTAACAA GGCAC TAC GTGCC ATACCAGCAATTTCT TERM 3803 3573179 - 3573197 + g 100 -6 -5.52986 | AGATTCAATACATGT GCAATTTC ATC GAAATAGC TTTTTTTAATCCCCT TERM 3804 3573257 - 3573243 - G 83 -6.4 -4.88407 | TGATGTAATCAAAAA TTGCCG CGA CGACAA CATCACGTTGTGCCA recC 3577815 - 3574444 - | exonuclease V subunit gamma YPTB3028 3578315 - 3577950 - | putative prepilin peptidase dependent protein YPTB3029 3578818 - 3578348 - | hypothetical protein YPTB3030 3579423 - 3578815 - | hypothetical protein YPTB3031 3579983 - 3579414 - | hypothetical protein TERM 3805 3579905 - 3579917 + g 80 -4.9 -5.04601 | TTATTAGTGATCTTT GTTTT ATA AAAAC TTTTTGCTTTCTAAG TERM 3806 3580087 - 3580102 + r 74 -4.7 -4.82901 | AAATACAGGGAGGTC TGCGA TACGAC TCGCA TTTTTATCGGAAGAC YPTB3032 3580204 - 3580106 - | hypothetical protein TERM 3807 3580225 - 3580207 - R 86 -8.8 -4.36485 | ATAAAAGACGCAAAA CGGAGCCA TTA CAGCTCCG ATATGAAGATTAAAT thyA 3581029 - 3580235 - | thymidylate synthase TERM 3808 3580607 - 3580586 - G 83 -7.3 -4.6902 | gap 1, opp_overlap 3580586 3580595, overlap 3580590 GTAGAACTGGAAAAA GGCA-TGGCA TGG TGCCAACGCC ATTTGATCCAGTTCG lgt 3581908 - 3581036 - | prolipoprotein diacylglyceryl transferase ptsP 3584405 - 3582159 - | fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain-containing protein TERM 3809 3584245 - 3584215 - G 78 -12.5 -2.62983 | opp_overlap 3584215 3584216, overlap 3584204 GCCAGCGTGATAGTA CGCCCACGGGGCT TTTTC AGCCCCCTGGTCG CCATTAGGTAGTAAC TERM 3810 3584216 - 3584226 + g 83 -8.2 -4.57073 | opp_overlap 3584204 3584215, overlap 3584215 CCAGCGTGATAGTAC GCCC ACG GGGC TTTTTCAGCCCCCTG YPTB3036 3584945 - 3584418 - | dinucleoside polyphosphate hydrolase TERM 3811 3585364 - 3585354 - H 81 -5.4 -5.10497 | AAGTTACGCAAAAAA GAGT AAA ACTC GCAAAAAAGCCTCTC TERM 3812 3585387 - 3585373 - H 73 -3.5 -5.08011 | AAAACTCGCAAAAAA GCCTC TCGTC AAGGC TGTAAATTGAACCAG TERM 3813 3585933 - 3585906 - g 73 -5.6 -4.49389 | gap 1 AGTGCACAAGGAAAA CCACTGGAAACGA CAT TCGTCTGC-GTGG CACCACTCACCGGGA mutH 3585642 - 3586328 + | DNA mismatch repair protein TERM 3814 3586434 - 3586414 - f 77 -8.3 -3.96298 | TAGTGATTAATTAAA GCGGGAT GTTCTCT ATCCCGC AGGTGCTTTATATCT TERM 3815 3586936 - 3586924 - g 73 -10.5 -3.1733 | overlap 3586922 3586921 CGCTGGATAAAAGCA CGCGG TTG CCGCG AAAAAATTATTTTAG TERM 3816 3587587 - 3587598 + G 73 -7.2 -4.16842 | overlap 3587571 GCTCTGGCCTTTGTG CGGC AACA GCCG TTTGTTGCCAGTACG tas 3586699 - 3587739 + | putative aldo-keto reductase TERM 3817 3587794 - 3587779 - T 91 -11.8 -3.43203 | opp_overlap 3587774 3587773 CTATCATAATATGAA GGCCGC TGAT GCGGCC TTGAGGTTATTGACA TERM 3818 3587874 - 3587900 + T 70 -7.2 -3.74872 | gap 1, opp_overlap 3587862, overlap 3587873 CATCCATGTAGGCTC GAG-CCGCGCC CTCCCT GGCGCGGACGC TTTACTCCCCTGCCT TERM 3819 3587957 - 3587986 + T 100 -16.5 -3.02511 | CGGGGCTTGTCAGCA TTCTGAAGGCCGC TGAT GCGGCCTTCAGGG TATTGACAAAGTGCC YPTB3039 3588541 - 3588116 - | hypothetical protein TERM 3820 3588651 - 3588702 + r 83 -11.8 -2.69964 | gap 1, opp_overlap 3588671, overlap 3588668 TTTCAAAAGGCGATA TTTGTCAGCAGTCTGAA-GGATCTC CTT GAGATCCTTTCAGATGACAGACAAA TCATATCATTCAGGC TERM 3821 3588668 - 3588684 + r 84 -10.9 -3.59979 | opp_overlap 3588671, overlap 3588651 TGTCAGCAGTCTGAA GGATCTC CTT GAGATCC TTTCAGATGACAGAC ygeD 3589928 - 3588708 - | hypothetical protein TERM 3822 3589126 - 3589105 - G 90 -10.1 -4.38712 | gap 1, overlap 3589106 TTTAGCGTCACAAAA CGGGCGGCGG CAC CCG-CGCCCA CCACAATCCCAATCG TERM 3823 3589125 - 3589106 - G 79 -11.4 -3.22906 | gap 1, overlap 3589105 TTAGCGTCACAAAAC GGGCGGCGG CAC CCG-CGCCC ACCACAATCCCAATC aas 3592081 - 3589925 - | bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase TERM 3824 3592213 - 3592196 - R 100 -11.3 -6.11644 | GTACCTAAAAAAAAA CCTACGC ATCT GCGTAGG TCGGTGCAAATAAAA bisC 3594791 - 3592530 - | putative biotin sulfoxide reductas2 galR 3595101 - 3596123 + | DNA-binding transcriptional regulator GalR lysA 3597382 - 3596120 - | diaminopimelate decarboxylase TERM 3825 3597126 - 3597140 + g 75 -11.4 -2.64155 | opp_overlap 3597123, overlap 3597123 3597122 CCCGGTTGATAACCC GCGTGC AAG GCACGC TCGATTTCACCCAAA lysR 3597598 - 3598539 + | DNA-binding transcriptional regulator LysR YPTB3047 3599696 - 3598536 - | MFS family sugar antiporter YPTB3048 3600989 - 3600081 - | LysR family transcriptional regulator YPTB3049 3601096 - 3601983 + | hypothetical protein YPTB3050 3602096 - 3602731 + | hypothetical protein cheD 3604360 - 3602717 - | putative methyl-accepting chemotaxis protein. TERM 3826 3602749 - 3602779 + g 100 -9.1 -4.84359 | overlap 3602751 CAATAGCAGCAATCG TGCTCTCCTTTGC TAATC GTAGAGGAGAGTA TTTTTCTACAGGTAA TERM 3827 3602751 - 3602777 + g 81 -9.5 -4.04397 | overlap 3602749 ATAGCAGCAATCGTG CTCTCCTTTGC TAATC GTAGAGGAGAG TATTTTTCTACAGGT YPTB3052 3605036 - 3604563 - | hypothetical protein YPTB3053 3605680 - 3605021 - | putative regulatory membrane protein. TERM 3828 3605124 - 3605140 + g 71 -6.7 -4.15703 | opp_overlap 3605124 3605122 TGCTGCTGATAAACA GATAAAA ACG TTTTATC TTGTTCTTTATCCAA YPTB3054 3605964 - 3606329 + | hypothetical protein YPTB3055 3607155 - 3606313 - | prepilin peptidase YPTB3056 3607642 - 3607181 - | hypothetical protein gspL 3608829 - 3607639 - | general secretion pathway protein L gspK 3609769 - 3608813 - | general secretion pathway protein K gspJ 3610374 - 3609778 - | putative general secretion pathway protein J gspI 3610711 - 3610367 - | general secretion pathway protein I YPTB3061 3611291 - 3610749 - | general secretion pathway protein H TERM 3829 3610859 - 3610829 - G 71 -7 -4.09685 | gap 1, overlap 3610848 CTTCATTTCTTAAAA CCA-AGGAGAAGT CCGAAT ACTCCTCCTCTGG AGAGAAAACCAATTG gspG 3611733 - 3611296 - | general secretion pathway protein G TERM 3830 3611530 - 3611513 - G 76 -9.9 -3.76224 | GGTTTAGTTACTAAA GCAGCAA TGCC TTGCTGC TCGGTCGGATAATCC gspF 3612955 - 3611753 - | putative general secretion pathway protein F. gspE 3614453 - 3612942 - | general secretion pathway protein E TERM 3831 3614014 - 3614024 + g 80 -4 -5.24129 | opp_overlap 3614014 CCATCAATACGAAAT CTTA CAG TAAG TTTTTTATCGAAAGA gspD 3616372 - 3614450 - | general secretion pathway protein D TERM 3832 3616345 - 3616330 - G 90 -2.6 -5.8187 | gap 1, opp_overlap 3616330, overlap 3616331 GAGTGAATAAAAAAA TC-ATCC CAT GGATAGA TTTAATTCCTTTGCC YPTB3066 3616986 - 3616453 - | general secretion pathway protein C TERM 3833 3616923 - 3616933 + g 85 -5.4 -5.30189 | overlap 3616925 GATTACAGTTGAGTG TCCT AAA AGGA TTTTTTAGTCTTATC YPTB3067 3617440 - 3617024 - | hypothetical protein YPTB3068 3618938 - 3618183 - | putative carbonic anhydrase TERM 3834 3618972 - 3618994 + H 88 -9.8 -4.12188 | overlap 3618973 TATAACCCTATTGTA TGCCGGGCAT TTA ATGCACGGCG TTTTAAAGGTAGTAC TERM 3835 3618973 - 3618993 + H 79 -11.1 -3.06991 | overlap 3618972 ATAACCCTATTGTAT GCCGGGCAT TTA ATGCACGGC GTTTTAAAGGTAGTA YPTB3069 3619262 - 3619621 + | hypothetical protein YPTB3070 3620008 - 3620202 + | hypothetical protein YPTB3071 3620224 - 3621174 + | hypothetical protein YPTB3072 3621289 - 3623475 + | autotransporter domain-containing protein TERM 3836 3625780 - 3625800 + G 76 -9.1 -3.87149 | opp_overlap 3625788 3625789 CACTCATCACTAAGT GGCAAATAT GGC ATGTTTGCC TTTAAATTTGATGCG YPTB3073 3623545 - 3626658 + | chondroitin ABC lyase TERM 3837 3626734 - 3626700 - T 79 -7.9 -4.33274 | gap 1, opp_overlap 3626704 3626705, overlap 3626702 3626705 GTTACATGATTAAAA CATGAC-TCAGGGCGC TTCG GCGCCCTGAGGTTATT GACAAAGTGCCCGCG TERM 3838 3626732 - 3626702 - T 86 -10.5 -3.76811 | gap 1, opp_overlap 3626704 3626705, overlap 3626700 3626705 TACATGATTAAAACA TGAC-TCAGGGCGC TTCG GCGCCCTGAGGTTA TTGACAAAGTGCCCG TERM 3839 3626704 - 3626729 + T 100 -14.7 -3.62046 | opp_overlap 3626702 3626700 3626705, overlap 3626705 CATGATTAAAACATG ACTCAGGGCGC TTCG GCGCCCTGAGG TTATTGACAAAGTGC TERM 3840 3626705 - 3626728 + T 100 -18.2 -2.77013 | opp_overlap 3626702 3626700 3626705, overlap 3626704 ATGATTAAAACATGA CTCAGGGCGC TTCG GCGCCCTGAG GTTATTGACAAAGTG TERM 3841 3626728 - 3626705 - T 100 -18.2 -2.96723 | opp_overlap 3626705 3626704, overlap 3626702 3626700 ATGATTAAAACATGA CTCAGGGCGC TTCG GCGCCCTGAG GTTATTGACAAAGTG TERM 3842 3626802 - 3626828 + T 72 -10.1 -2.88849 | gap 1, opp_overlap 3626791, overlap 3626797 3626803 ACATCCATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCTCTGCC TERM 3843 3626803 - 3626829 + T 84 -10.1 -3.82218 | gap 1, opp_overlap 3626791, overlap 3626797 3626802 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCTCTGCCT TERM 3844 3626892 - 3626907 + T 100 -11.8 -4.43681 | TTGTCAGCAGTCTGC GGGCGC TTAG GCGCCC TTTTACTATTACGTC TERM 3845 3627076 - 3627047 - T 100 -14.5 -3.44206 | gap 1 CAAGATCCACGATAA CCTCTTCCTGAGCA GAT TG-TCAGGAAGAGG AAGTCAGCCGTCGAT YPTB3074 3628651 - 3627098 - | putative sulfatase YPTB3075 3629491 - 3630267 + | DeoR family regulatory protein TERM 3846 3630627 - 3630601 - g 82 -10.2 -3.79747 | overlap 3630602 CCATTTAGGACCAAA CCGTTGGCAG CACTTGC CTGCCAACGA AGCCATGGCGCATGC TERM 3847 3630626 - 3630602 - g 76 -11.5 -2.87527 | overlap 3630601 CATTTAGGACCAAAC CGTTGGCAG CACTTGC CTGCCAACG AAGCCATGGCGCATG agaZ 3630317 - 3631615 + | putative tagatose 6-phosphate kinase TERM 3848 3631771 - 3631789 + G 72 -5.8 -4.41633 | overlap 3631768 3631772 CTGCATCAGGCATTA GCCGCGAG TAA CACGCGGA TTATTTTTACCGGTG YPTB3077 3631612 - 3632778 + | putative phosphosugar isomerase manX 3632796 - 3633293 + | PTS system, N-acetylgalactosamine-specific IIB component YPTB3079 3633340 - 3634128 + | putative PTS permease protein, IIC subunit TERM 3849 3634363 - 3634344 - g 77 -6.4 -4.63218 | opp_overlap 3634343, overlap 3634346 CCGCGTTGAAGAAAA TCCACGGT AACA ACCGTGCA GATTTGGCGAAATCG YPTB3080 3634118 - 3635008 + | putative PTS permease protein, IID subunit YPTB3081 3635094 - 3635534 + | PTS system, N-acetylgalactosamine-specific IIA component TERM 3850 3635915 - 3635925 + G 74 -6.8 -4.36914 | ACCCGCACCGCAACC CTGC TCG GCAG TTTTCTGGAGGGGCC YPTB3082 3635537 - 3636703 + | putative acetylglucosamine-6-phosphate deacetylase kduD2 3636899 - 3637654 + | 2-deoxy-D-gluconate 3-dehydrogenase TERM 3851 3638479 - 3638494 + G 77 -6.8 -4.63932 | opp_overlap 3638478 TCCTGCCCCAGAGAG CAGTGC AACA GCGCTG TTTTGTTACGGGCTG YPTB3084 3637670 - 3638728 + | hypothetical protein TERM 3852 3638797 - 3638824 + F 75 -10.6 -2.77013 | overlap 3638796 ATTCATTTTGTTGCA CTGGCGCACATC ACCT GATGTGCGTGAG GTTATTGACAAAGTG TERM 3853 3638898 - 3638924 + F 72 -10.1 -2.88849 | gap 1, opp_overlap 3638887, overlap 3638893 3638899 ACATCCATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCTCTGCC TERM 3854 3638899 - 3638925 + F 84 -10.1 -3.82218 | gap 1, opp_overlap 3638887, overlap 3638893 3638898 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCTCTGCCT TERM 3855 3638988 - 3639007 + F 100 -12.2 -5.24531 | TTGTCAGCAGTCTGG CGCACATC ACCT GATGTGCG TTTTTTATAGGCGAT TERM 3856 3639472 - 3639460 - g 71 -6.3 -4.24404 | opp_overlap 3639460 3639459 ATGCAAACGGTAAAA CTGTT ACA AACAG CTTTCAAACCAACGG YPTB3085 3639159 - 3640385 + | putative Chondro-6-sulfatase TERM 3857 3640597 - 3640583 - g 80 -4.2 -5.25803 | overlap 3640586 3640590 3640594 AATCTGGATAAAAAA GCACTA AGC CAGCGC CCAGTTCCCGTGCGC TERM 3858 3640645 - 3640671 + G 71 -6.6 -4.15044 | gap 1, opp_overlap 3640638, overlap 3640642 3640640 CAAGATGATCGATGC GGCACA-GCGG GCGATG CCGCATGTGTC TTTGTTGGCCAAAAA TERM 3859 3640951 - 3640935 - g 71 -6.5 -4.15565 | CCGATGAGGTCAAAA GCCGCGA TTA TCACGAC AACATGATCTCCGTC TERM 3860 3641969 - 3641951 - g 91 -11 -4.36903 | TGGATCAAAGATAAA CCCAAACC CGT GGCTTGGG GGCAAGATCGCTATC YPTB3086 3640406 - 3642013 + | putative sulfatase YPTB3087 3642136 - 3643623 + | hypothetical protein gatY 3643734 - 3644588 + | tagatose-bisphosphate aldolase TERM 3861 3644786 - 3644757 - g 74 -9.9 -3.57792 | opp_overlap 3644766 GCACCTATTTTGAAA CGCCGATCAGCGC AGAT GCGCTGTTAAGCG ATCGTCTGGATCACC YPTB3089 3644612 - 3645190 + | ThiJ/PfpI-family thiamine biogenesis protein YPTB3090 3645441 - 3645160 - | hypothetical protein TERM 3862 3645316 - 3645342 + g 83 -13.1 -3.05844 | opp_overlap 3645322, overlap 3645318 3645322 ATAGCCAGTACCGTT GATGAACCGCA TGGTC TGCGGTTCGTC TCTTCGACTCCCCAA YPTB3091 3646513 - 3645431 - | LacI-family regulatory protein TERM 3863 3646457 - 3646483 + g 73 -8.8 -3.8691 | overlap 3646456 CACTCTTGATACCGT GCTAATCGAAAG ACC CGTTTGATTAGC TATTTCTTGTATTTT TERM 3864 3646770 - 3646752 - H 82 -3.2 -5.56264 | opp_overlap 3646752 TTGAAATATAAAAAA CTCAAT ATTATCA ATTGAG TATATTTTATATAGC TERM 3865 3647354 - 3647336 - g 70 -2.3 -5.00616 | overlap 3647339 3647341 TGGTTCCCGAAAAAA GAACGGC CCATT GCCGCTG GATGGGCTGGGGTGG TERM 3866 3647351 - 3647339 - g 75 -6.2 -4.61482 | overlap 3647336 3647341 TTCCCGAAAAAAGAA CGGC CCATT GCCG CTGGATGGGCTGGGG YPTB3092 3646907 - 3648214 + | MFS superfamily hexuronate transporter YPTB3093 3648363 - 3650738 + | glucosidase family protein TERM 3867 3650784 - 3650759 - T 84 -9.7 -3.84017 | opp_overlap 3650761, overlap 3650761 TAATGTTAAATACAA GACGGACTTCC TGAT GGAAGCCCGTT TATTTTTGTACGGGT TERM 3868 3650761 - 3650782 + T 100 -10.1 -4.96501 | opp_overlap 3650759 3650761 ATGTTAAATACAAGA CGGACTTCC TGAT GGAAGCCCG TTTATTTTTGTACGG TERM 3869 3650782 - 3650761 - T 100 -12.3 -3.49634 | opp_overlap 3650761, overlap 3650759 ATGTTAAATACAAGA CGGACTTCC TGAT GGAAGCCCG TTTATTTTTGTACGG lacI 3651950 - 3650877 - | lac repressor lamB 3652222 - 3653481 + | maltoporin TERM 3870 3653660 - 3653685 + T 100 -16.3 -4.73108 | TCGGTTATTCTTCTA TGCTCACTACC CTTA GGTAGTGAGCA TTTTAGTTTTATACC TERM 3871 3654287 - 3654266 - T 100 -12.3 -5.47218 | opp_overlap 3654266 GTCGATGTAAAAAAA CGCCCACTC GGCT GAATGGGCG TGTATGGCATTCAGT TERM 3872 3654266 - 3654287 + T 73 -10.1 -2.9186 | opp_overlap 3654266 GTCGATGTAAAAAAA CGCCCACTC GGCT GAATGGGCG TGTATGGCATTCAGT bgaB 3656369 - 3654309 - | putative beta-galactosidase. TERM 3873 3654490 - 3654456 - G 73 -7.8 -3.99324 | overlap 3654460 TTCTACCACGATAAA TTCACTCTCACCATCG GTA CGACGGTGAGCGGTAA CCCCATAAGGGAACT TERM 3874 3654486 - 3654460 - G 81 -13 -2.7242 | overlap 3654456 ACCACGATAAATTCA CTCTCACCATCG GTA CGACGGTGAGCG GTAACCCCATAAGGG TERM 3875 3654768 - 3654799 + g 73 -7.4 -4.15044 | gap 1, overlap 3654755 3654754 TGCAAGTCCTTGGAC TTGATTGCTCTCGCC ATC GGCCAGA-CAGTCAA TTTCTTCGGACCAGA TERM 3876 3655161 - 3655148 - G 78 -5.3 -4.8622 | TTTCCCAATCAAAAA TGATG GCAA CATCA GCGTCTACTTTACTT TERM 3877 3656398 - 3656418 + r 83 -11.9 -2.60571 | opp_overlap 3656394, overlap 3656397 ATAATAAATACTTGG TGTTGCCCA TAA TGGGCAACG ATTAATTAAAAACTT YPTB3098 3657622 - 3656420 - | putative galactosidase YPTB3099 3658478 - 3657627 - | ABC maltodextrin transporter, permease subunit YPTB3100 3659797 - 3658490 - | ABC maltodextrin transporter, permease subunit TERM 3878 3658896 - 3658886 - G 77 -4.6 -4.87389 | CATGGCAAAAACAAA CGGG AAA CCCA GCCATGTCTGCATCA YPTB3101 3661192 - 3659957 - | ABC type periplasmic sugar(maltose)-binding protein TERM 3879 3661516 - 3661498 - H 87 -5.2 -5.50313 | opp_overlap 3661499 3661500, overlap 3661500 CATAAAATCAAAAAA CGCACCAC AGG GTGATGTG TGATGGCCCCCTGAC YPTB3102 3661555 - 3662661 + | ABC sugar transporter, ATP-binding protein TERM 3880 3662736 - 3662714 - f 73 -9.1 -3.46509 | overlap 3662708 GGTTAAGAATACCAA GCGGGTTTC CTGTT GAAGCCCGC TGAATATTAAGATAG YPTB3103 3663200 - 3664708 + | sugar ABC transporter ATPase YPTB3104 3664758 - 3665786 + | sugar ABC transporter permease TERM 3881 3666241 - 3666213 - g 79 -2.3 -5.52384 | overlap 3666216 CTTTTATGAAAAAAA CAATGCTACAAAC TCT GCTTGCTGCAACG CTGATACTTTCCTTT TERM 3882 3666238 - 3666216 - g 77 -4.8 -4.8487 | overlap 3666213 TTATGAAAAAAACAA TGCTACAAAC TCT GCTTGCTGCA ACGCTGATACTTTCC YPTB3105 3666203 - 3667204 + | ABC transporter, periplasmic sugar-binding protein TERM 3883 3667225 - 3667252 + F 100 -12.7 -3.57792 | opp_overlap 3667214 ATGATCGCTATCGCC CCCGGCAGCGG CAAAAT CTGCTGTCGGG TTTGAGGGTAAATCC YPTB3106 3667983 - 3668501 + | hypothetical protein YPTB3107 3668877 - 3669734 + | hypothetical protein TERM 3884 3669741 - 3669753 + F 74 -4.8 -4.82901 | opp_overlap 3669736 AGCCAATAACCGTTT GGTG CTGCT CACC TTTTTATCAGAAGGG TERM 3885 3669892 - 3669868 - f 75 -8.6 -3.90762 | overlap 3669866 TAGCGGGCAAAAATA GGCTGACTGA TATTG TCACTCAGCC CCCCTTGACCAAAAT TERM 3886 3669931 - 3669944 + F 77 -3.9 -5.21709 | overlap 3669922 CCCAGTTCAACATTT TGATT TAAA AATCA TTTTTTGATATCCCC TERM 3887 3670056 - 3670074 + F 75 -7.4 -4.27861 | opp_overlap 3670046 3670049, overlap 3670057 TAAAAGCACGCGGGA TGCGTTGC GCA GTAACGCG TTTTAGATATATCTT TERM 3888 3670768 - 3670744 - g 76 -9.4 -3.80733 | gap 1 CTCACGCCAGAACAA GTAGCG-CGTA TTAA TACGGCGCTAC TGGCTGCGGTAGACA YPTB3108 3670177 - 3670857 + | hypothetical protein YPTB3109 3670857 - 3671177 + | hypothetical protein YPTB3110 3671581 - 3671276 - | hypothetical protein YPTB3111 3672577 - 3671798 - | hypothetical protein YPTB3112 3673898 - 3673182 - | hypothetical protein TERM 3889 3673700 - 3673711 + g 72 -5.8 -4.36914 | overlap 3673696 GTGTCAGCCTAGAGC TGGG TAGC CCCA TTTTCTGAAACCAGG YPTB3113 3676231 - 3673919 - | hypothetical protein TERM 3890 3674547 - 3674557 + g 75 -3.2 -5.11836 | TGCTGTTGTAAAAGT GCTT TTT GAGC TTTTGTTTTGAGTAT YPTB3114 3676772 - 3676488 - | hypothetical protein YPTB3115 3677076 - 3676819 - | hypothetical protein TERM 3891 3677430 - 3677447 + r 70 -2.7 -4.93877 | gap 1, overlap 3677432 GCTTGTAGGCTTCTT TG-GCTTC GTT GAGGCTCA TTTTATTTGCTCCAC YPTB3116 3679121 - 3677589 - | hypothetical protein TERM 3892 3677867 - 3677886 + g 80 -6.5 -4.7373 | TTTTCTTTCTTTCAG TCCAGAT AGGATC ATCTGGA TTTTTACTGAGATAG YPTB3117 3680768 - 3679626 - | hypothetical protein YPTB3118 3681037 - 3681402 + | hypothetical protein YPTB3119 3681415 - 3682071 + | hypothetical protein TERM 3893 3682152 - 3682165 + F 75 -3.1 -5.18866 | opp_overlap 3682152, overlap 3682156 TGACCTAAAACGACA GGAAT AAAG GTTCC TTTTATTTATTTGCC TERM 3894 3682388 - 3682337 - g 74 -6.6 -4.40993 | gap 1, opp_overlap 3682372 TATAAATTATTAAAA CAAAAGCGCT-TCCCGCCACC GATAAAAATAG GGGGGCGGGCTATCGCTTTTG TTGAAAGTGAGGTGA YPTB3120 3682253 - 3682453 + | putative DNA binding protein YPTB3121 3682938 - 3682612 - | phage protein TERM 3895 3682666 - 3682679 + g 78 -5.2 -5.00616 | GCCTTTCCCTTTCCA CGGC ATATAA GCCG TTTTTTGCACCACAA TERM 3896 3683030 - 3682992 - H 74 -6.6 -4.2828 | opp_overlap 3682996, overlap 3682996 3683016 GCGGATGTATCAAAA GGAACGCCCCGACATCAC TCA ATACTGCCGGGGCGTTTA TCCACCACGGAGCAA TERM 3897 3683026 - 3682996 - H 93 -11.8 -3.72073 | opp_overlap 3682996, overlap 3682992 3683016 ATGTATCAAAAGGAA CGCCCCGACATCAC TCA ATACTGCCGGGGCG TTTATCCACCACGGA TERM 3898 3685279 - 3685293 + G 73 -7 -4.17296 | overlap 3685280 CGCTGGCAATTTCCC CGCGCG CCC CGCGCA TTTATCTGTATCACG TERM 3899 3685280 - 3685292 + G 73 -10.5 -3.09896 | overlap 3685279 GCTGGCAATTTCCCC GCGCG CCC CGCGC ATTTATCTGTATCAC TERM 3900 3685430 - 3685419 - g 79 -2.2 -5.5208 | GCAGAATACAAAAAA GCCA GAAC TGAC AAAGGGTTCCGCTAC YPTB3122 3683238 - 3685529 + | putative phage primase TERM 3901 3685635 - 3685601 - T 100 -10.2 -5.26155 | opp_overlap 3685601 ATACAAAGATAAAAA CTGACTGAATAGTT TACTAAT AACTGTTCAGTCAG TATTCAGAGGTGTTC TERM 3902 3685601 - 3685635 + T 93 -12.4 -3.04248 | opp_overlap 3685601 ATACAAAGATAAAAA CTGACTGAATAGTT TACTAAT AACTGTTCAGTCAG TATTCAGAGGTGTTC TERM 3903 3685711 - 3685680 - T 71 -4.4 -4.7497 | GGCAGGTATTAAAAA CTGAACACCTGAAC AGTT GCTGAAGAGTTCAG CGGGGAGTATTCAGA YPTB3123 3686327 - 3685929 - | putative DNA binding (HTH) protein. YPTB3124 3686644 - 3686327 - | hypothetical protein TERM 3904 3686662 - 3686676 + r 70 -7.2 -3.87075 | opp_overlap 3686662 3686660, overlap 3686665 TCCACTTAATAAATA TAACCT AGT AGGTTA TTTATAGCAAGTCAT YPTB3125 3687149 - 3686787 - | putative DNA binding protein YPTB3126 3687472 - 3687212 - | bacteriophage protein TERM 3905 3687735 - 3687762 + r 80 -10.5 -3.54424 | GGCCGGATATAGTGC CCCCGCAGCGG CAAAAT CCGTTGCTGGG TTTAGCAGCCTGAGA TERM 3906 3688293 - 3688266 - R 89 -12.2 -3.39429 | opp_overlap 3688272, overlap 3688272 AATAATCTCTAAATA CAAAAAGGCATC GTGA GATGCCTTTTTA ATTCCCCACACCACC TERM 3907 3688272 - 3688287 + r 100 -9 -4.8622 | opp_overlap 3688266 3688272 CTCTAAATACAAAAA GGCATC GTGA GATGCC TTTTTAATTCCCCAC TERM 3908 3688287 - 3688272 - R 100 -9 -5.19879 | opp_overlap 3688272, overlap 3688266 CTCTAAATACAAAAA GGCATC GTGA GATGCC TTTTTAATTCCCCAC YPTB3129 3689380 - 3688397 - | phage integrase/recombinase YPTB3130 3689794 - 3689447 - | phage repressor protein C YPTB3131 3689860 - 3690132 + | bacteriophage Cox protein YPTB3132 3690338 - 3690622 + | hypothetical protein TERM 3909 3690618 - 3690662 + F 82 -8 -4.42062 | opp_overlap 3690611 3690624 3690625, overlap 3690625 CTGAAATATTGAGGG GATAAAGCCCTCCCTCAAAT AACAG ATTTGCGAAAGGGTTTTATC TTTATTTACGAAATG TERM 3910 3690625 - 3690655 + F 70 -2.5 -4.93454 | opp_overlap 3690611 3690624 3690625, overlap 3690618 ATTGAGGGGATAAAG CCCTCCCTCAAAT AACAG ATTTGCGAAAGGG TTTTATCTTTATTTA TERM 3911 3690746 - 3690727 - f 74 -4.2 -4.92385 | overlap 3690729 TACATCGAAAGAAAA TAGCCCCA CTCC TGAGGCTG AACTTACAACATCTT TERM 3912 3691138 - 3691124 - f 100 -8.5 -5.32882 | overlap 3691125 3691126 CAGTACCACAAAAAA CGCGC GCCGG GCGCG ATGCAGTACCCCGGC TERM 3913 3691138 - 3691126 - f 75 -10.5 -2.86102 | overlap 3691124 3691125 GTACCACAAAAAACG CGCGC CGG GCGCG ATGCAGTACCCCGGC YPTB3133 3691181 - 3691450 + | hypothetical protein YPTB3134 3691680 - 3692030 + | hypothetical protein YPTB3135 3692337 - 3693002 + | putative bacteriophage protein YPTB3136 3693012 - 3693713 + | putative bacteriophage protein TERM 3914 3694107 - 3694135 + G 82 -10.3 -3.92324 | gap 1 CCCGCCCCAACCTTA CCCCGGCA-GCG ATGAAA CGTTTGCCGGGG TTTACTCTTGGAACA TERM 3915 3696365 - 3696343 - g 74 -11.2 -2.91322 | overlap 3696340 AGATTGCGGAAATTA CCGCCGCCGA GGC TCGGCGGTGA CGACGAGGACGTAAA YPTB3137 3694060 - 3696615 + | putative phage protein. TERM 3916 3696812 - 3696825 + T 81 -9.5 -3.85698 | opp_overlap 3696812 TAGCCCATAAAAAAA CCCGC TTTC GCGGG TTTCTCAAAAAAACG TERM 3917 3696825 - 3696812 - T 100 -9.5 -5.626 | opp_overlap 3696812 TAGCCCATAAAAAAA CCCGC TTTC GCGGG TTTCTCAAAAAAACG YPTB3138 3697203 - 3696877 - | hypothetical protein YPTB3139 3698267 - 3697200 - | hypothetical protein YPTB3140 3700069 - 3698264 - | orf16-like phage protein TERM 3918 3699742 - 3699757 + g 78 -5.4 -4.99645 | gap 1, overlap 3699741 CGCCGCCACCTGACT GCATCGC CAT GCG-TGC TTTTATTTCTGCCAT TERM 3919 3700156 - 3700103 - H 100 -16.5 -4.14004 | opp_overlap 3700109 3700113, overlap 3700113 TAACACAACGATAAA TTATAATAAATTCGGTTAAGTTACG TTAA CAACACTTAACCGAATTTATTATAA GGGAATAACCACACC TERM 3920 3700109 - 3700150 + H 71 -9.1 -3.29511 | opp_overlap 3700103 3700113, overlap 3700113 AACGATAAATTATAA TAAATTCGGTTAAGT TACGTTAACAAC ACTTAACCGAATTTA TTATAAGGGAATAAC TERM 3921 3700146 - 3700113 - H 78 -7.5 -4.43714 | opp_overlap 3700113 3700109, overlap 3700103 ATAAATTATAATAAA TTCGGTTAAGTTACG TTAA CAACACTTAACCGAA TTTATTATAAGGGAA TERM 3922 3700922 - 3700902 - g 77 -3.9 -5.16151 | overlap 3700903 3700904 CAAATGGAAGAAAAA GCCAACGGT ACC ACCGCTGAT ACACCAGAAGAAGCC YPTB3141 3700242 - 3701330 + | hypothetical protein YPTB3142 3701365 - 3702393 + | phage protein YPTB3143 3702396 - 3703100 + | hypothetical protein TERM 3923 3703520 - 3703508 - g 85 -6.2 -5.0916 | CGCTCAATACAAAAA GGCG GTCTA CGCC AGGGCAAAAGCGGAT YPTB3144 3703209 - 3703682 + | hypothetical protein YPTB3145 3703679 - 3704173 + | hypothetical protein YPTB3146 3704170 - 3704829 + | hypothetical protein TERM 3924 3705308 - 3705264 - g 75 -5.6 -4.73297 | gap 1, overlap 3705266 3705267 GAATTAACAAACAAA TACGGGCGCTGGGCCTGGTCA GTGT TGACCGTGGCC-GCACCCACA GACTTGCTATTGCCC TERM 3925 3705661 - 3705673 + G 75 -7.7 -4.21275 | GTCGCACACTGGACG TCACC GGC GGTGA TTTTCAATCAATTGA YPTB3147 3704853 - 3706019 + | hypothetical protein YPTB3148 3706022 - 3706477 + | hypothetical protein YPTB3149 3706487 - 3706789 + | phage P2 holin-like protein TERM 3926 3707025 - 3707009 - g 73 -2.2 -5.00895 | gap 1, overlap 3707011 TGTATCAGACAAAAA CAGAGGC CTAT GCCCC-G CTGGGTGAGTACTGG YPTB3150 3706786 - 3707127 + | hypothetical protein YPTB3151 3707127 - 3707501 + | hypothetical protein TERM 3927 3707655 - 3707636 - g 79 -2.2 -5.48213 | gap 1, overlap 3707638 GACGCAAAATAAAAA TG-TGATCA CAC TGACCATCA ACGGTAACGCGGTGC YPTB3152 3707616 - 3707891 + | hypothetical protein YPTB3153 3708117 - 3710093 + | putative bacteriophage tail protein. YPTB3154 3710090 - 3710419 + | hypothetical protein TERM 3928 3711110 - 3711135 + G 74 -3.1 -5.06816 | overlap 3711112 3711113 GACTGATTGCCGGCA TTGCCGGTCTG ACCA CTGACCGGATA TTTTTCTTGCACGAT YPTB3155 3710416 - 3711600 + | putative bacteriophage protein. YPTB3156 3711593 - 3712216 + | putative bacteriophage protein. TERM 3929 3713327 - 3713294 - g 83 -4.7 -5.252 | opp_overlap 3713297, overlap 3713296 3713297 GATCCCCATAAAAAA TATTTGCTGATAAAA AATC TTTTATCAGCAATCG TTGAAATGGGGCCAG TERM 3930 3713325 - 3713296 - g 83 -9.5 -4.25873 | opp_overlap 3713297, overlap 3713294 3713297 TCCCCATAAAAAATA TTTGCTGATAAAA AATC TTTTATCAGCAAT CGTTGAAATGGGGCC TERM 3931 3713324 - 3713297 - g 84 -13 -3.14801 | opp_overlap 3713297, overlap 3713296 3713294 CCCCATAAAAAATAT TTGCTGATAAAA AATC TTTTATCAGCAA TCGTTGAAATGGGGC TERM 3932 3713297 - 3713324 + G 81 -13 -2.73364 | opp_overlap 3713297 3713296 3713294 CCCCATAAAAAATAT TTGCTGATAAAA AATC TTTTATCAGCAA TCGTTGAAATGGGGC YPTB3157 3712226 - 3713821 + | hypothetical protein YPTB3158 3713821 - 3714339 + | putative bacteriophage protein. TERM 3933 3714406 - 3714374 - g 71 -4.8 -4.60041 | opp_overlap 3714376 3714377 3714404, overlap 3714375 3714376 ACGCATTCCGAAAAA TCTGGCCCCGGTC-AG CTG CTCGACCGTGGCC-GT TCATCCTTGGACGTT TERM 3934 3714376 - 3714405 + G 78 -10.7 -3.27476 | gap 1, opp_overlap 3714375 3714376 3714374, overlap 3714377 3714404 GCATTCCGAAAAATC TGGCCCCGGTC-AG CTG CTCGACCGTGGCCG TTCATCCTTGGACGT TERM 3935 3714377 - 3714404 + G 78 -12 -2.56164 | gap 1, opp_overlap 3714375 3714376 3714374, overlap 3714376 CATTCCGAAAAATCT GGCCCCGGTC-AG CTG CTCGACCGTGGCC GTTCATCCTTGGACG YPTB3159 3714336 - 3715046 + | bacteriophage protein TERM 3936 3715104 - 3715092 - g 77 -4.1 -5.0133 | TATTCCGCTAAAAAA CATCA TTG TGACG CTCTCTATGTCAATA YPTB3160 3715039 - 3715593 + | hypothetical protein TERM 3937 3716693 - 3716667 - g 78 -12.2 -2.52464 | overlap 3716685 CCCGCCGTCAAGCCA GGCGAGCAGTTG CAG CAACAGCGCGCC GGCGTCAGTCAGCGC YPTB3161 3715590 - 3717311 + | hypothetical protein TERM 3938 3717873 - 3717896 + T 72 -8 -3.7829 | opp_overlap 3717877, overlap 3717876 GTTTGTGATGCAAAA CAAAGCCCCG CAAG CGGGGCCATG TTTACTCAGTGTGGT TERM 3939 3717892 - 3717877 - T 100 -11.8 -4.68908 | opp_overlap 3717876 3717873 GTGATGCAAAACAAA GCCCCG CAAG CGGGGC CATGTTTACTCAGTG TERM 3940 3717953 - 3717928 - T 76 -10.7 -2.62515 | opp_overlap 3717928 AATGTGTGGACACTA CTTGAAATTAA TCCT TTAATTTCAAG TTGTTAGTTTAAATA TERM 3941 3717928 - 3717953 + T 88 -10.7 -3.90425 | opp_overlap 3717928 AATGTGTGGACACTA CTTGAAATTAA TCCT TTAATTTCAAG TTGTTAGTTTAAATA int 3719252 - 3718038 - | putative phage integrase. TERM 3942 3719656 - 3719641 - R 100 -11.8 -4.7497 | CTGACTCAGTAAAAA GGGCGC CGTA GCGCCC TGAGGAATTTATCGT lysS 3721202 - 3719685 - | lysyl-tRNA synthetase prfB 3722310 - 3721212 - | peptide chain release factor 2 TERM 3943 3722174 - 3722196 + g 100 -13.4 -4.0802 | CGGGTTCATTCCAGA CGTCGGGCTG TTC CAGCTCGGCG TTTACTTCTTCCAGT recJ 3724222 - 3722489 - | ssDNA exonuclease RecJ TERM 3944 3723967 - 3723942 - G 79 -11.1 -3.56643 | overlap 3723943 CCCATACTGCGCAAA GCCAGCACCGC CAAC GCGGTACTGGT CGCGCCGTCAGCATC TERM 3945 3723966 - 3723943 - G 90 -14.6 -2.73771 | overlap 3723942 CCATACTGCGCAAAG CCAGCACCGC CAAC GCGGTACTGG TCGCGCCGTCAGCAT dsbC 3724945 - 3724229 - | thiol:disulfide interchange protein DsbC xerD 3725875 - 3724976 - | site-specific tyrosine recombinase XerD fldB 3725982 - 3726500 + | flavodoxin FldB TERM 3946 3726536 - 3726564 + T 84 -9.7 -3.84825 | opp_overlap 3726541, overlap 3726537 TACATCAGAGCTCAA TTTAACGGGCA CCCGATA TGCCCGTTAAG TTTAGTCTAGCTGCG TERM 3947 3726537 - 3726563 + T 79 -11 -2.90573 | opp_overlap 3726541, overlap 3726536 ACATCAGAGCTCAAT TTAACGGGCA CCCGATA TGCCCGTTAA GTTTAGTCTAGCTGC creD 3728063 - 3726585 - | hypothetical protein TERM 3948 3727596 - 3727577 - G 71 -9.2 -3.55444 | CGCTGAGTGGCGAAA TGCGCTGG ATAC CCCGCGCA TCACTCAGTGCCAGC creC 3729581 - 3728163 - | sensory histidine kinase CreC creB 3730290 - 3729592 - | DNA-binding response regulator CreB YPTB3172 3730715 - 3730290 - | hypothetical protein YPTB3173 3730962 - 3730696 - | hypothetical protein TERM 3949 3731081 - 3731062 - H 78 -10 -3.54382 | overlap 3731045 CGTTAATATAACTAA CGGGAATG TTAC CACTCCCG GGATAGGGGGTTAAG TERM 3950 3731105 - 3731119 + H 80 -2.8 -5.52384 | opp_overlap 3731105 3731107, overlap 3731107 GGTTAAGGTACTAAA TACACT GCA AGTGCA TTTTTTTAATCGCCC TERM 3951 3731672 - 3731661 - g 73 -7.2 -4.14739 | GTAGCCAGGCCAAAA CCGC GCTG GCGG AAATCTTTACTGAAT YPTB3174 3731279 - 3732271 + | putative global regulator TERM 3952 3732286 - 3732276 - T 73 -5.4 -4.66814 | AAGATAAATAATAAA GAGT TCT ACTC TATAGAGACCGGTTA TERM 3953 3732287 - 3732314 + T 100 -17.2 -5.23292 | opp_overlap 3732293 3732295 TAAAGAGTTCTACTC TATAGAGACCGG TTAA CCGGTCTCTATA TTTTGTTTTATATCA TERM 3954 3732308 - 3732293 - T 75 -10.4 -2.89564 | opp_overlap 3732287, overlap 3732295 GTTCTACTCTATAGA GACCGG TTAA CCGGTC TCTATATTTTGTTTT YPTB3175 3732841 - 3732344 - | hypothetical protein YPTB3176 3733800 - 3733099 - | putative hemolysin III. YPTB3177 3735104 - 3734001 - | putative exported protein. TERM 3955 3736671 - 3736688 + r 73 -9.8 -3.04144 | overlap 3736686 TTCCCCCCGTTGCTG CCGCCC CGACAA GGGCGG TGTTACCAATGCCAA TERM 3956 3736859 - 3736845 - R 74 -10 -3.1506 | AAAGCTGGCTACCAA CTACCG CAT CGGTAG AGGTAGATGAAATCG TERM 3957 3737528 - 3737515 - R 70 -5.3 -4.47183 | overlap 3737521 TATTATCTAAACAAA CCATA ACAT TATGG AATGTCGGCTAGTTG YPTB3179 3738855 - 3738418 - | hypothetical protein TERM 3958 3739116 - 3739090 - R 72 -7.2 -3.9749 | gap 1, opp_overlap 3739099, overlap 3739091 3739107 AGGCAGAAGAGTAAA GCGTCCGCGCC AGGGAA GGCGCGG-CTC GAGCCTACATGGATG TERM 3959 3739191 - 3739216 + r 82 -8.2 -4.26903 | opp_overlap 3739190 3739191, overlap 3739195 CACTTTGTCAATAAC CTCAGGGCCG CTTTCA CGGCCCTTGG TTTTGCTCAGATGAG TERM 3960 3739195 - 3739212 + r 80 -9.8 -3.71672 | opp_overlap 3739190 3739191, overlap 3739191 TTGTCAATAACCTCA GGGCCG CTTTCA CGGCCC TTGGTTTTGCTCAGA gcvP 3742112 - 3739233 - | glycine dehydrogenase TERM 3961 3742293 - 3742318 + r 71 -9 -3.23979 | overlap 3742287 TTTAACCTACTCGGC GTCAGGGCCA ATAAAA TGGCCCTCAC TTGAGTTACTCTTCA gcsH 3742710 - 3742324 - | glycine cleavage system protein H gcvT 3743876 - 3742779 - | glycine cleavage system aminomethyltransferase T TERM 3962 3744033 - 3744023 - R 75 -8.2 -3.76167 | opp_overlap 3744022, overlap 3744021 CCATAAGCTAAAATA GGCG AGG CGCC CTCTTCAGGCGACAA visC 3745817 - 3744597 - | hypothetical protein ubiH 3747168 - 3745990 - | 2-octaprenyl-6-methoxyphenyl hydroxylase pepP 3748533 - 3747220 - | proline aminopeptidase P II TERM 3963 3747689 - 3747675 - G 76 -9.2 -3.91032 | opp_overlap 3747671 3747676, overlap 3747676 GAACGATGTCATAAA CCGCCC GCT GAGCGG GGGTAAATTTGCCAT YPTB3186 3749199 - 3748621 - | hypothetical protein YPTB3187 3749536 - 3749865 + | Z-ring-associated protein TERM 3964 3750381 - 3750393 + G 80 -9.1 -4.17516 | AATCCAGCAAGCTCA CACGG TAG CCGTG TTTCTCTCCTTTGAC YPTB3188 3750229 - 3750825 + | putative Methenyl-THF synthetase-family protein (MTHFS). TERM 3965 3750878 - 3750852 - T 100 -22.4 -6.02914 | TCGAGATAAAAAAAA CACCGGGGATCC TAT GGATCCCCGGTG TCAGACTGCTGACAA TERM 3966 3750967 - 3750941 - T 72 -7.2 -3.9749 | gap 1, opp_overlap 3750950, overlap 3750942 AGGCAGAAGAGTAAA GCGTCCGCGCC AGGGAG GGCGCGG-CTC GAGCCTACATGGATG TERM 3967 3751046 - 3751072 + T 88 -10.8 -3.8901 | opp_overlap 3751042 3751041 TTGTCAATAACCTCA CACCTGAGATCC TAT GGATCCCAGGCG TTTAATCATTTCAGG serA 3752331 - 3751090 - | D-3-phosphoglycerate dehydrogenase TERM 3968 3751136 - 3751146 + g 77 -6.8 -4.63542 | GGAATGGCCTTCATC GCCT GCA AGGC TTTTTCCGCATTATC TERM 3969 3752634 - 3752598 - R 71 -2.2 -5.22039 | overlap 3752589 TTCAAAGGCAAAAAA TTATCAGGGTGAAGCC AAATA AACGACACCCTGAAAA ATTTTAGCCAATCAC rpiA 3753294 - 3752638 - | ribose-5-phosphate isomerase A iciA 3753636 - 3754544 + | chromosome replication initiation inhibitor protein TERM 3970 3754539 - 3754571 + T 71 -4.9 -4.64676 | GACTCGTTTATTGGG CAGTAGCTGTTTA TGTTTAC TGAGCAGCAACTG TTTTATTGGCAGTAG yggE 3755334 - 3754555 - | hypothetical protein TERM 3971 3755119 - 3755134 + g 77 -6.8 -4.64766 | AAAGTATTGCGCGAC GCGGGT ATCG ACCTGC TTTTTGGCATCTGCA YPTB3193 3756141 - 3755524 - | arginine exporter protein TERM 3972 3755693 - 3755673 - G 73 -7.5 -4.30001 | overlap 3755670 CAAAAAACCAAACAA TAGAGGCCG TGA CCGCCCCTA AAGCAAACCAAGGGC TERM 3973 3756353 - 3756368 + r 72 -7.5 -3.97308 | opp_overlap 3756353 CCGAGCGAGTAAAAA CGGGC ACTGAG GCCCG TTTAATCTATTTACC TERM 3974 3756368 - 3756353 - R 85 -7.5 -4.7497 | opp_overlap 3756353 CCGAGCGAGTAAAAA CGGGC ACTGAG GCCCG TTTAATCTATTTACC YPTB3194 3757273 - 3756404 - | MscS family mechanosensitive ion channel protein TERM 3975 3756724 - 3756695 - G 74 -10.7 -2.79679 | overlap 3756685 3756684 3756682 AATATCGGCATCATA TGCCACACCGACA ATCA TGTCGGTACGGCG GTTCGGCTCGCGGCT TERM 3976 3757308 - 3757294 - R 100 -7.8 -5.26316 | CCATCCTACAAAAAA GCTCCC TAC AGGAGC AATTACGCCAAAAAA TERM 3977 3757345 - 3757326 - R 93 -4.2 -5.78622 | overlap 3757337 TTACGCCAAAAAAAA TCACCATC TAAC GCTGGCGA CTCTAGCCAACGGCC TERM 3978 3757485 - 3757498 + r 78 -9.5 -3.58343 | opp_overlap 3757485 TCAGCAACGAAAAAA GGCCC CGTA GGGCC TTTCAGACTGCTGAC TERM 3979 3757498 - 3757485 - R 100 -9.5 -5.30155 | opp_overlap 3757485 TCAGCAACGAAAAAA GGCCC CGTA GGGCC TTTCAGACTGCTGAC TERM 3980 3757589 - 3757563 - R 84 -10.1 -3.82218 | gap 1, opp_overlap 3757572, overlap 3757564 3757579 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 3981 3757590 - 3757564 - R 72 -10.1 -2.88849 | gap 1, opp_overlap 3757572, overlap 3757563 3757579 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT TERM 3982 3757690 - 3757663 - R 100 -18.6 -3.62046 | opp_overlap 3757670, overlap 3757670 GCACTTTGTCAATAA CCTAAAAGGCCC CGTA GGGCCTTTTAGG TCAGTCCGAACAGAC TERM 3983 3757683 - 3757670 - R 88 -9.5 -4.36127 | opp_overlap 3757670, overlap 3757663 GTCAATAACCTAAAA GGCCC CGTA GGGCC TTTTAGGTCAGTCCG TERM 3984 3757670 - 3757683 + r 85 -9.5 -4.19817 | opp_overlap 3757663 3757670 GTCAATAACCTAAAA GGCCC CGTA GGGCC TTTTAGGTCAGTCCG fbaA 3758778 - 3757711 - | fructose-bisphosphate aldolase pgk 3760074 - 3758911 - | phosphoglycerate kinase TERM 3985 3759152 - 3759167 + g 78 -7.6 -4.31329 | opp_overlap 3759148 AACACACCAACCGGA CCATTC CACA GAATGG TTTTGGCATTTTTCA TERM 3986 3759528 - 3759546 + g 100 -16 -3.56568 | opp_overlap 3759515 3759522 3759520 TAGCAACCATTGGAC GCGCTGGG TTA CCCAGCGC TTTACCCAATGCTTC epd 3761193 - 3760177 - | erythrose 4-phosphate dehydrogenase TERM 3987 3761276 - 3761297 + r 73 -5.8 -4.42653 | opp_overlap 3761277, overlap 3761277 3761278 ATCGTATTATCACAA TTCGGCCA TAATAC TGGCCGGG TTTTCTCGGTGGGAT TERM 3988 3761391 - 3761381 - R 70 -5.4 -4.49344 | overlap 3761387 3761388 AAAGTCATGATAAAA GGAA TAT TTCC CTGAAAAAGGGCACA TERM 3989 3761434 - 3761449 + r 91 -10.4 -4.09864 | opp_overlap 3761434 ATTAGTCAAAAAAAA GACCGC AAAA GCGGTC TTTTAACAGGTGCAT TERM 3990 3761449 - 3761434 - R 100 -10.4 -5.82316 | opp_overlap 3761434 ATTAGTCAAAAAAAA GACCGC AAAA GCGGTC TTTTAACAGGTGCAT tktA 3763566 - 3761572 - | transketolase TERM 3991 3763740 - 3763730 - H 71 -4.6 -4.63218 | TTGGGGTGAACAAAA GCAG CCA CCGC ACAGCGACAAACCAT TERM 3992 3764677 - 3764663 - g 88 -7 -5.0133 | GATTTGCTGAAAAAA CGGGGC ATT GACCCG AACGGTCTGGTAACC YPTB3199 3764057 - 3764809 + | putative lipoprotein TERM 3993 3764836 - 3764861 + T 73 -8.9 -3.52102 | opp_overlap 3764838, overlap 3764840 3764856 AGTCTCTTATCAATG CAGACGCCCCA CTGT TGGGGCGTGAG TTCTGTAGCTGACGT TERM 3994 3764859 - 3764838 - T 70 -10.1 -2.56596 | opp_overlap 3764836 3764840 3764856 TCTCTTATCAATGCA GACGCCCCA CTGT TGGGGCGTG AGTTCTGTAGCTGAC TERM 3995 3764840 - 3764857 + T 88 -12.7 -2.63555 | opp_overlap 3764838, overlap 3764836 3764856 TCTTATCAATGCAGA CGCCCCA CTGT TGGGGCG TGAGTTCTGTAGCTG YPTB3200 3765241 - 3764921 - | putative Rieske protein. TERM 3996 3765374 - 3765350 - R 88 -9.9 -4.15044 | opp_overlap 3765353, overlap 3765352 3765353 GTCGCGCCGAATAAA TATCCTCCGGC ATA GCCGGAGGTTT TTCATATGCGCCTAT TERM 3997 3765372 - 3765352 - R 100 -12.5 -3.6761 | opp_overlap 3765353, overlap 3765350 3765353 CGCGCCGAATAAATA TCCTCCGGC ATA GCCGGAGGT TTTTCATATGCGCCT TERM 3998 3765371 - 3765353 - R 100 -16 -2.80244 | opp_overlap 3765353, overlap 3765352 3765350 GCGCCGAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC TERM 3999 3765353 - 3765371 + r 100 -16 -4.8048 | opp_overlap 3765353 3765352 3765350 GCGCCGAATAAATAT CCTCCGGC ATA GCCGGAGG TTTTTCATATGCGCC tnp 3765910 - 3765452 - | transposase IS1541 TERM 4000 3766041 - 3766023 - R 100 -16 -3.07307 | opp_overlap 3766023 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 4001 3766023 - 3766041 + r 100 -16 -4.36914 | opp_overlap 3766023 GAAAGCTTTACTGAA CCCCCAGC CTA GCTGGGGG TTTTCTGGGCACAAA TERM 4002 3766080 - 3766061 - R 100 -8.6 -5.60993 | opp_overlap 3766061 CTGGGCACAAAAAAA GGACAAAC CTGA GTTTGCCC TTTAATCGATACTGA speA 3768090 - 3766111 - | arginine decarboxylase metK 3769297 - 3770451 + | S-adenosylmethionine synthetase TERM 4003 3770497 - 3770527 + F 100 -13.3 -4.62441 | opp_overlap 3770497 TAAAACGATGAAGAA CCACCCTGTAAGC AACAC GCTGGCAGGGTGG TTTATTTGTATGCAC TERM 4004 3770527 - 3770497 - f 100 -11.8 -3.81516 | opp_overlap 3770497 TAAAACGATGAAGAA CCACCCTGTAAGCA ACA CGCTGGCAGGGTGG TTTATTTGTATGCAC SprT 3770644 - 3771156 + | hypothetical protein TERM 4005 3771491 - 3771472 - g 80 -4.2 -5.31456 | gap 1, opp_overlap 3771473, overlap 3771473 3771476 TCAACCCAGAAAAAA TGCAGCGCG AGC CGCGCGG-A TTGAATGGGAACATG TERM 4006 3771488 - 3771476 - g 72 -10.5 -2.96157 | opp_overlap 3771473, overlap 3771473 3771472 CCCAGAAAAAATGCA GCGCG AGC CGCGC GGATTGAATGGGAAC endA 3771254 - 3771961 + | putative endonuclease I precursor. TERM 4007 3772494 - 3772476 - g 74 -3.8 -4.9725 | opp_overlap 3772466 ACGGGCAGATAAAAA GAATCTGA TTG TCCGACTC GCTGAAGGGCAATGG YPTB3206 3772297 - 3773028 + | hypothetical protein gshB 3773054 - 3774013 + | glutathione synthetase YPTB3208 3774129 - 3774692 + | hypothetical protein YPTB3209 3774692 - 3775114 + | Holliday junction resolvase-like protein TERM 4008 3775252 - 3775266 + F 95 -5.7 -5.59564 | GTTTAAAATATTGCA CACCT CTTGC AGGTG TTTTTTTACATTTAT YPTB3210 3775294 - 3776178 + | putative carbon-nitrogen hydrolase YPTB3211 3776182 - 3777297 + | agmatine deiminase TERM 4009 3777322 - 3777349 + T 100 -15 -4.20783 | AAATAAGCCGCCTGC TTGACCCGGATC ATCC GATCCGGGTTAA TTTATTGCATCACCT YPTB3212 3778530 - 3777406 - | MTB family outer membrane protein TERM 4010 3778987 - 3778951 - g 81 -13.1 -2.87527 | opp_overlap 3778954, overlap 3778955 CAGTGATGAGCAAAG CAAAGCGGGGATTTC CTTGAGT GAACTCCCCGCCTTG GCTGACAGCATTAGT TERM 4011 3778983 - 3778955 - g 85 -10.3 -4.11623 | opp_overlap 3778954, overlap 3778951 GATGAGCAAAGCAAA GCGGGGATTTC CTTGAGT GAACTCCCCGC CTTGGCTGACAGCAT YPTB3213 3778550 - 3779248 + | hypothetical protein proC 3779381 - 3780202 + | pyrroline-5-carboxylate reductase yggT 3780490 - 3781044 + | hypothetical protein YPTB3216 3781041 - 3781331 + | hypothetical protein YPTB3217 3781431 - 3782024 + | putative deoxyribonucleotide triphosphate pyrophosphatase TERM 4012 3782326 - 3782343 + G 71 -9.1 -3.56643 | opp_overlap 3782319, overlap 3782335 GAAGCCAACCCCGGA GCGGTCG AAGC CGATCGC TTTAGCGGCTATCAG YPTB3218 3782017 - 3783147 + | coproporphyrinogen III oxidase TERM 4013 3783262 - 3783289 + T 74 -9.8 -3.14961 | overlap 3783260 3783258 CAGTATGACTGGTGT CTCTGAGGGCAG AAAC CTGCCCTCAGCC TCTCTTCCTGCTAAT YPTB3219 3792627 - 3783316 - | pore forming RTX toxin family protein TERM 4014 3789227 - 3789208 - G 78 -12.2 -2.53715 | opp_overlap 3789207 3789208, overlap 3789207 TTCATTATGACTAAT TTCACGCC ACTC GGCGTGAA TATTATCGTCAATGA TERM 4015 3789208 - 3789227 + g 85 -12.2 -3.28447 | opp_overlap 3789208 3789207, overlap 3789207 TTCATTATGACTAAT TTCACGCC ACTC GGCGTGAA TATTATCGTCAATGA TERM 4016 3790698 - 3790710 + g 74 -6.3 -4.32177 | TTATAATTTTTATTT GATCT GAC AGATC TTTCTTATAAAGTAG TERM 4017 3793019 - 3792991 - R 90 -11 -3.9749 | gap 1, opp_overlap 3793000, overlap 3792992 AGGCAGAAGAGTAAA GCG-TCCGCGCCA CGGA TGGCGCGGATCGA GCCTACATGGATGTT TERM 4018 3793018 - 3792992 - R 100 -14.5 -2.97771 | gap 1, opp_overlap 3793000, overlap 3792991 GGCAGAAGAGTAAAG CG-TCCGCGCCA CGGA TGGCGCGGATCG AGCCTACATGGATGT YPTB3220 3793890 - 3793132 - | hypothetical protein YPTB3221 3794904 - 3793978 - | glutaminase TERM 4019 3794983 - 3794966 - R 100 -9.8 -4.91852 | opp_overlap 3794965 3794963 3794966 GCCAGTAAAAACAAA GGCGCC GGTTAG GGCGCC CTGTTTAATGATCAG TERM 4020 3794966 - 3794983 + r 71 -9.8 -2.68493 | opp_overlap 3794966, overlap 3794965 3794963 GCCAGTAAAAACAAA GGCGCC GGTTAG GGCGCC CTGTTTAATGATCAG YPTB3222 3795341 - 3795015 - | hypothetical protein trmB 3796060 - 3795341 - | tRNA (guanine-N(7))-methyltransferase mutY 3796473 - 3797588 + | adenine DNA glycosylase YPTB3225 3797766 - 3798038 + | hypothetical protein TERM 4021 3798042 - 3798066 + F 83 -9.3 -4.015 | gap 1, opp_overlap 3798039 3798035 3798044, overlap 3798044 CCGAGTAAGTAACCA CA-CGGGGCC AATTAA GGCCCCGCTG TTATTTCCTAAATAG TERM 4022 3798044 - 3798063 + F 83 -12.1 -2.75069 | opp_overlap 3798039 3798035 3798044, overlap 3798042 GAGTAAGTAACCACA CGGGGCC AATTAA GGCCCCG CTGTTATTTCCTAAA TERM 4023 3798063 - 3798044 - f 86 -12.1 -2.97613 | opp_overlap 3798044 3798042, overlap 3798039 3798035 GAGTAAGTAACCACA CGGGGCC AATTAA GGCCCCG CTGTTATTTCCTAAA TERM 4024 3798729 - 3798705 - g 100 -9.4 -5.18371 | gap 1, opp_overlap 3798705 TGCTACAAAACAAAA TGCAAACACGG ACTT CCG-GTTTGCA TGTGATCTCGTTCGT mltC 3798221 - 3799297 + | murein transglycosylase C YPTB3227 3799708 - 3800679 + | hypothetical protein TERM 4025 3801526 - 3801491 - g 79 -11.1 -3.57792 | opp_overlap 3801493 CCACGCACTGGCAAA CCCGTCGACACGCCG CGTGAT CGCCGTTTCGACGAG AGCTATAACGCCACC YPTB3228 3800672 - 3802816 + | putative hydroxamate-type ferrisiderophore receptor. TERM 4026 3803019 - 3803046 + T 73 -8.5 -3.65351 | opp_overlap 3803021 3803023 AGGGTAATGTTACTA CAGAGGGCA TTGTTACTGC TGCCCTCTG TTTAGATCAACGTCC YPTB3229 3804098 - 3803079 - | ABC sugar transporter, permease subunit TERM 4027 3803980 - 3803969 - G 83 -4.4 -5.35721 | ACATAACAATAAAAA CAAC GGTC GTTG AGTTGTCTAGCAGGA mglA 3805594 - 3804095 - | sugar ABC transporter ATPase TERM 4028 3805356 - 3805385 + g 71 -3 -4.95155 | gap 1 ATAATGCCAATACGG CTTT-CTTTACTG TGGAT CGGTGAAGTAAAG TTTTTCTCCTCTCCG YPTB3231 3806599 - 3805640 - | putative sugar ABC transporter periplasmic binding protein speC 3809326 - 3807164 - | ornithine decarboxylase TERM 4029 3808623 - 3808609 - G 71 -7 -4.03234 | CCGTTTCCAGATAAA CCGGCG TCG CGCCCG CCTGGATCAGCGCAC TERM 4030 3808902 - 3808892 - G 76 -2.4 -5.1925 | GTAGAATTCAAAAAA CTGG CGT CCTG CAGGATGCTTGCGAA TERM 4031 3809594 - 3809584 - R 78 -4 -5.09225 | ACCGCATGGAAAAAA TAAG GGG CTTA GTAGAAATAAAGCAG TERM 4032 3810037 - 3810021 - R 76 -10.9 -2.62616 | opp_overlap 3810020 3810019 3810016 TCAGTCGGTAGAGCA GGGGATT GAA AATCCCC GTGTCCTTGGTTCGA TERM 4033 3810192 - 3810218 + r 85 -7.2 -4.90002 | opp_overlap 3810192 TACGGGACGAAGAAA CCGGAGGATGTC GAT GACAAACTTCGG TTTTCTTGTGTCTTA TERM 4034 3811267 - 3811287 + r 72 -9.7 -2.9006 | opp_overlap 3811272, overlap 3811270 TTCCTGCGCACTTTT CAACAGGCT GAT AGCCGGTTG TATCTCCAGTACCTT TERM 4035 3811645 - 3811671 + r 71 -3.2 -5.01042 | opp_overlap 3811645, overlap 3811641 TTCTTATACAACAAA TTATTATATAAA TAG TTTGTGTAATGA TTTTTCCTTTAAATT insA 3812595 - 3812320 - | insertion sequence protein YPTB3237 3813458 - 3812691 - | hypothetical protein TERM 4036 3813283 - 3813303 + g 100 -4.7 -6.11644 | opp_overlap 3813284 3813286, overlap 3813284 TTCCAATTTTTAATT ACACATTGA ATG TCAGTGTGG TTTTTTTTTACATGC TERM 4037 3813284 - 3813302 + g 77 -8.2 -4.2536 | opp_overlap 3813284 3813286, overlap 3813283 TCCAATTTTTAATTA CACATTGA ATG TCAGTGTG GTTTTTTTTTACATG TERM 4038 3813316 - 3813327 + g 74 -4.4 -4.84033 | TGGTTTTTTTTTACA TGCA AAAT TGCA TTTTCATTTTTGTCT TERM 4039 3813433 - 3813414 - G 71 -3 -5.00616 | GTGGGGTGTAAAAAA TAAAATAT AAAA ATATTTCA ATGTCAATTTTTTAA YPTB3238 3815742 - 3813445 - | hypothetical protein TERM 4040 3813571 - 3813584 + g 71 -3.9 -4.75288 | ATCGGCACTTTCTGC TTGAT CTTT ATCAA TTTCTTTTACTGTAC TERM 4041 3816758 - 3816748 - R 84 -2.6 -5.60993 | opp_overlap 3816748 CCTTCTACAAAAAAA TTAT TAT ATAA ATAGTTTGTGTAATG insA 3817589 - 3817314 - | insertion sequence protein YPTB3243 3818486 - 3817986 - | hypothetical protein TERM 4042 3818277 - 3818292 + g 70 -7.6 -3.93583 | CTCACTTTCCTCACT TTCCTC ACTT GAGGAA TTTCTGCATAGCTTA YPTB3244 3820709 - 3818487 - | hypothetical protein TERM 4043 3820649 - 3820669 + g 100 -15.5 -3.18511 | opp_overlap 3820653 GCATCATCGCGTCAA CCCAGTCAG CAT CTGACTGGG TTGCATCTCTATCTC YPTB3245 3823072 - 3820724 - | hypothetical protein clpB3 3825717 - 3823069 - | Clp ATPase TERM 4044 3824984 - 3825007 + g 72 -6 -4.40561 | overlap 3824994 GCGGTTTTACCGACG CCCGGTTC ACCGACCA GAATCGGG TTGTTTTTACGGCGG TERM 4045 3826051 - 3826032 - R 100 -11.4 -5.69068 | opp_overlap 3826035 TAAAAACACAAAAAA GCAGGCGG CGAA CCGCCTAC TTGCGGGGTTACCCT YPTB3247 3826626 - 3826135 - | hypothetical protein YPTB3248 3828366 - 3826630 - | PAL/OmpA family membrane protein TERM 4046 3827279 - 3827249 - G 77 -10.4 -3.61398 | GCTTTCGGGGAATAA TCCGTCATCGCCAC GCT GTGGTACTGACGGA TATCAAAGGCCACCC YPTB3249 3829052 - 3828366 - | hypothetical protein TERM 4047 3828762 - 3828745 - G 74 -2.6 -5.09225 | overlap 3828746 3828747 AGGGTATTGAAAAAA TGCGCC TGTAAG GGCGAA TGGCACCACACGAAG YPTB3250 3830401 - 3829049 - | hypothetical protein YPTB3251 3831957 - 3830413 - | hypothetical protein TERM 4048 3831918 - 3831940 + g 74 -6.3 -4.34402 | gap 1, overlap 3831919 TATTCTTTAATACGG TCGT-CGCAG TACC CTGCGCACGG TTTTCCTGTACAGAC YPTB3252 3832506 - 3832006 - | hypothetical protein TERM 4049 3834145 - 3834134 - R 88 -3 -5.84011 | AATAAAAAATAAAAA GATA TAAA TATC ATCCCAACGCTTCTG TERM 4050 3834254 - 3834264 + r 70 -2.6 -4.96773 | ATAAAAATAATTAGT TTTA ACA TAAA TTTATTTTTGATTCC insA 3834708 - 3834445 - | insertion element protein YPTB3256 3835171 - 3834776 - | putative lipoprotein YPTB3257 3836272 - 3835622 - | hypothetical protein TERM 4051 3837536 - 3837520 - g 70 -2.2 -4.95957 | opp_overlap 3837520 TAAATTAAGGAAAAA GACGTT TAAGG ATCGTC TTAACTGGGAGGTGA yspI 3837443 - 3838093 + | N-acylhomoserine lactone synthase YspI yspR 3838817 - 3838074 - | quorum-sensing transcriptional regulator TERM 4052 3838843 - 3838863 + H 74 -9.8 -3.15544 | opp_overlap 3838843 3838852 3838857 CATTTACTGTACTAA GGTGCAAT AGGAA ATTGCACC TTAGTACAACTACCG TERM 4053 3838863 - 3838843 - H 74 -9.8 -3.16881 | opp_overlap 3838843, overlap 3838852 3838857 CATTTACTGTACTAA GGTGCAAT AGGAA ATTGCACC TTAGTACAACTACCG TERM 4054 3839049 - 3838993 - H 70 -3.9 -4.78157 | gap 1, opp_overlap 3838999, overlap 3838999 ACCAAAAATAATAAA GGAAAATGCTACAGAAGTGC-ACCTG TTTCTG CAAGTAGAACTTCTGTAGCATTTAAT ATAATGTCTAGCTCC TERM 4055 3838999 - 3839043 + H 86 -10.2 -3.88062 | gap 1, opp_overlap 3838993 3838999 AATAATAAAGGAAAA TGCTACAGAAGTGC-ACCTGT TTCT GCAAGTAGAACTTCTGTAGCA TTTAATATAATGTCT TERM 4056 3839043 - 3838999 - H 100 -11.7 -4.71708 | gap 1, opp_overlap 3838999, overlap 3838993 AATAATAAAGGAAAA TGCTACAGAAGTGC-ACCTG TTTCTG CAAGTAGAACTTCTGTAGCA TTTAATATAATGTCT TERM 4057 3839642 - 3839664 + G 71 -10.6 -2.83449 | opp_overlap 3839644 3839646, overlap 3839639 3839644 3839646 TACTAATCCGGCAGA TATAGCGCCC TCA GGACGCTATA TGATTATAGCGCTGT TERM 4058 3839662 - 3839644 - g 74 -11 -2.88579 | opp_overlap 3839644 3839642 3839639 3839646, overlap 3839646 CTAATCCGGCAGATA TAGCGCCC TCA GGACGCTA TATGATTATAGCGCT YPTB3260 3839379 - 3840737 + | hypothetical protein TERM 4059 3840911 - 3840950 + F 100 -15.4 -5.93809 | opp_overlap 3840918 3840944 ATTGTCCCTTCCCTA TGATAAATTTCATGCTAA TAAT TAAGCATGAAATTTATCA TTTTTTTTATAAAAA TERM 4060 3840943 - 3840918 - f 74 -7.7 -3.96148 | opp_overlap 3840911 CTTCCCTATGATAAA TTTCATGCTAA TAAT TAAGCATGAAA TTTATCATTTTTTTT YPTB3261 3841125 - 3841958 + | hypothetical protein YPTB3262 3843472 - 3842249 - | major facilitator superfamily efflux protein TERM 4061 3842700 - 3842683 - G 74 -6.3 -4.42238 | gap 1, overlap 3842684 3842685 CTATGCTAAGCAAAA TG-GCCAC GTG GTGGCTCA CCGTGGTGGCCGAAT TERM 4062 3844549 - 3844527 - g 74 -11.3 -2.78032 | opp_overlap 3844526 3844525, overlap 3844526 3844524 CTGTCGGTAAAAGAG GCCAAACGC GGTAT GCGCTTGGC ACGTTTGGCTCAAAC rhbC 3843612 - 3845384 + | siderophore biosynthesis protein, IucA familly iucB 3845368 - 3846318 + | putative siderophore biosynthesis protein IucB iucC 3846315 - 3848063 + | putative siderophore biosynthesis protein IucC iucD 3848060 - 3849388 + | putative siderophore biosynthesis protein IucD iutA 3849460 - 3851640 + | putative ferric siderophore receptor TERM 4063 3851753 - 3851708 - T 80 -10 -3.73914 | opp_overlap 3851708 3851712, overlap 3851712 ATCACCCATCAATAA TTA-AGGGGCTTTGCGCAAAAT TAAG ACATTGCGCAA-GCCCCTATAA TTTGTTTATGGCAAT TERM 4064 3851708 - 3851753 + T 82 -7.9 -4.55697 | opp_overlap 3851708 3851712, overlap 3851712 ATCACCCATCAATAA TTA-AGGGGCTTTGCGCAA AATTAAGACA TTGCGCAA-GCCCCTATAA TTTGTTTATGGCAAT TERM 4065 3851748 - 3851712 - T 100 -12.4 -3.56142 | gap 1, opp_overlap 3851708 3851712, overlap 3851708 CCCATCAATAATTAA GGGGCTTTGCGCAAAAT TAAG ACATTGCGCAA-GCCCC TATAATTTGTTTATG TERM 4066 3851712 - 3851748 + T 77 -10.3 -3.16414 | gap 1, opp_overlap 3851712 3851708, overlap 3851708 CCCATCAATAATTAA GGGGCTTTGCGCAA AATTAAGACA TTGCGCAA-GCCCC TATAATTTGTTTATG YPTB3268 3853371 - 3851947 - | Sodium:galactoside symporter (GPH) family protein. YPTB3269 3854618 - 3853533 - | hypothetical protein TERM 4067 3854938 - 3854913 - H 88 -3.3 -5.85737 | gap 1, overlap 3854918 3854922 ATATGAATAAAAAAA CG-AAAGTGACT ATG AGCCACATTGCG GCCAAAGCGGGAGTA TERM 4068 3854932 - 3854918 - H 74 -6.4 -4.57518 | overlap 3854913 3854922 AATAAAAAAACGAAA GTGACT ATG AGCCAC ATTGCGGCCAAAGCG TERM 4069 3855077 - 3855065 - g 76 -9.1 -3.87815 | GGCTATGTTCATAAA GCCGT GGA ACGGC CCATTGCCAGAGATA YPTB3270 3854924 - 3855919 + | LacI-family regulatory protein. TERM 4070 3856338 - 3856350 + G 80 -9.1 -4.18934 | overlap 3856332 CGCCAATCGCGGCCT GGCCA TCT TGGCC TTTATTGGCATCCTC YPTB3271 3856201 - 3857580 + | sodium/sulfate symporter TERM 4071 3857617 - 3857638 + T 86 -10.2 -3.86346 | opp_overlap 3857617 TACGCCGTCAGGGAA TTAGGCCC CTGCAT GGGCCTAA TTTATGGGGCAATGA TERM 4072 3857638 - 3857617 - T 76 -10.2 -3.05596 | opp_overlap 3857617 TACGCCGTCAGGGAA TTAGGCCC CTGCAT GGGCCTAA TTTATGGGGCAATGA YPTB3272 3858173 - 3857760 - | hypothetical protein TERM 4073 3858110 - 3858123 + g 77 -6.7 -4.59773 | TGCCGGAGACAACTT TCTGG CTAT CCAGA TTTTTCAAAGTAAGA YPTB3273 3859103 - 3858717 - | hypothetical protein TERM 4074 3859143 - 3859154 + r 70 -5.8 -4.29907 | overlap 3859128 3859125 TGGAGGACGTCTTCC GCCA TTAT TGGC TTTATATTCTAATAT YPTB3274 3859902 - 3859378 - | hypothetical protein YPTB3275 3860465 - 3860127 - | hypothetical protein TERM 4075 3860536 - 3860502 - R 70 -9.4 -2.7898 | opp_overlap 3860503, overlap 3860499 GCTAATACTTAACCA CTTTGAGTAGCTCTAA TAT TTAGAGCTACTCACTA AAAAAATAAGAAATT YPTB3276 3861122 - 3860595 - | hypothetical protein TERM 4076 3860644 - 3860632 - G 71 -2.7 -4.87786 | TCAATCTCAGAAAAA GAAAT TTT ATCTC GGGCAAAGGGCGGTT TERM 4077 3860724 - 3860710 - G 77 -5 -4.91109 | overlap 3860711 CTTTTATCATAAAAA CTATCC CAT GGATAA ATACCAAAATACATT TERM 4078 3864432 - 3864402 - R 100 -14.3 -3.91897 | opp_overlap 3864402 3864406, overlap 3864406 CCCGTTAGCTAGAAA TAAATTCCCAATG CTAAC CATTGGGAATTTA TTTTACTTAATGTCA TERM 4079 3864402 - 3864432 + r 100 -14.3 -4.4773 | opp_overlap 3864402 3864406, overlap 3864406 CCCGTTAGCTAGAAA TAAATTCCCAATG CTAAC CATTGGGAATTTA TTTTACTTAATGTCA TERM 4080 3864428 - 3864406 - R 100 -10.7 -4.57482 | opp_overlap 3864402 3864406, overlap 3864402 TTAGCTAGAAATAAA TTCCCAATG CTAAC CATTGGGAA TTTATTTTACTTAAT TERM 4081 3864406 - 3864428 + r 100 -10.7 -4.78981 | opp_overlap 3864406 3864402, overlap 3864402 TTAGCTAGAAATAAA TTCCCAATG CTAAC CATTGGGAA TTTATTTTACTTAAT YPTB3279 3865094 - 3864435 - | hypothetical protein YPTB3280 3865908 - 3865483 - | hypothetical protein TERM 4082 3866230 - 3866246 + r 71 -9.5 -2.90645 | opp_overlap 3866229 3866227 3866230 CAGAATTAATAACAC TCCTCAA TTA TTGAGGA TAATATTATATTTTT YPTB3281 3866743 - 3866252 - | hypothetical protein YPTB3282 3871193 - 3866709 - | hypothetical protein TERM 4083 3869070 - 3869052 - GR 73 -5.2 -4.60889 | overlap 3869054 AATGACCCGCAAAAA GCCCCATG CAT CATAGGCC AGTTCCGTGCGCTGC TERM 4084 3869616 - 3869598 - GR 70 -5.9 -4.26344 | overlap 3869601 ATAGCGGTAGTAAAA CGACAGC CCGTT GCGGTCG GTATGGCGCACCATT YPTB3283 3872526 - 3871207 - | hypothetical protein YPTB3284 3874777 - 3872552 - | hypothetical protein TERM 4085 3872739 - 3872769 + g 74 -9 -3.63228 | AGCGTAATACTGGTG CCGGCGGTGATA GTGATTG TGTCACCGACGG TTAATTTATCGTGCC TERM 4086 3872830 - 3872843 + g 83 -2.3 -5.58454 | TCTTGGATTTTTTAT AACCC TCGA GGGTA TTTTTTTGATATCCG TERM 4087 3875312 - 3875344 + r 76 -9.2 -3.57144 | TTAGGTTATTTATTA GGGTATCAGTACCC TCACT GCATACTGATACCC TTTACACATAAAAAC YPTB3285 3879133 - 3875363 - | putative autotransporter secreted protein TERM 4088 3876587 - 3876607 + g 72 -11.1 -2.50816 | overlap 3876586 GTTCACCCGGACCGA GGTGGTGCC GGT GGCATCGCC GTTGATCACTAACCG TERM 4089 3879379 - 3879391 + r 70 -2.7 -5.01823 | ATAAGACCCGACTAA TTCTT TGT AGGAA TTTTCTTGTTATTGT TERM 4090 3879550 - 3879560 + r 73 -2.6 -5.15969 | opp_overlap 3879550 GTTGGCGACACTAAA TAAA TGA TTTA TTTTTTAACTTACCG TERM 4091 3879769 - 3879739 - R 83 -9.1 -4.15044 | opp_overlap 3879738 3879739 TCTCCCCTGAATAAA GGTATCAGTACCC TCACT GCATACTGATACC CTTTACACATAAAAA YPTB3286 3883553 - 3879789 - | putative autotranporter secreted protein TERM 4092 3881013 - 3881033 + g 72 -11.1 -2.50816 | overlap 3881012 GTTCACCCGGACCGA GGTGGTGCC GGT GGCATCGCC GTTGATCACTAACCG TERM 4093 3884032 - 3884042 + r 75 -3.2 -5.14626 | TTCCTTACCCTACGT CGTT TCG AGCG TTTTATTTTCGTGAT gntP 3885908 - 3884565 - | fructuronate transporter TERM 4094 3884791 - 3884771 - G 81 -12.5 -3.08133 | opp_overlap 3884775, overlap 3884750 GATCGACTGAGGTAA TGGTCCCGG TGA CCGGGTCCA TTACCGCAGCACCGA TERM 4095 3885591 - 3885564 - G 76 -7 -4.42788 | gap 1 GGCAACCTCATAAAA CATC-GCCAGACC AAA GATCAGGCCGATG ATAATTACCGCGGCT TERM 4096 3886228 - 3886206 - H 83 -11.4 -2.94912 | opp_overlap 3886210, overlap 3886210 GCGGCAAGCGAGAGA CAAATGGGTC TGG AACCCATTTG AACCGCATTTATGTT YPTB3288 3887447 - 3887845 + | hypothetical protein TERM 4097 3888087 - 3888067 - f 84 -9.9 -3.75933 | overlap 3888084 ATATATGTTATTAAA TATGCTTAA CTA TTAAGCATA AAATAATATAAATAG YPTB3289 3888281 - 3889156 + | hypothetical protein YPTB3290 3891276 - 3889519 - | iron ABC transporter transmembernae protein TERM 4098 3890473 - 3890461 - G 71 -9.1 -3.52079 | CAATACTTCAGACAA GGGGA TCC TCCCC CCTACCCAGCCCCAG TERM 4099 3890550 - 3890562 + g 77 -4.7 -4.87786 | overlap 3890559 TAAAACTGTAGATCG GCCAG ACA CCGGC TTTTTCTGCCGTTAA TERM 4100 3890804 - 3890787 - G 79 -11.3 -3.60971 | opp_overlap 3890781 AGGGTAACGTTGAAA GCATGGC TAAC GCCATGC GCCAATCTTTTAGCA YPTB3291 3893041 - 3891269 - | iron ABC transporter transmembernae protein TERM 4101 3892257 - 3892234 - G 100 -9.6 -5.00616 | CCCCTTGGGAAAAAA GCATGATGCC AACA GGCATAATGC ACAATAAACCGAGAT TERM 4102 3892620 - 3892571 - G 80 -2.9 -5.38326 | gap 2, overlap 3892579 CCAATCAAAGAAAAA CAGTAAAATGGCGGCAGCAATAG GCGTGA CAATTGCCGCCGCCATA-T-CGG GTAAATGGTGAGCCA TERM 4103 3892614 - 3892579 - G 100 -15.5 -4.62102 | overlap 3892571 AGAAAAACAGTAAAA TGGCGGCAGCAATAG GCGTGA CAATTGCCGCCGCCA TATCGGGTAAATGGT YPTB3292 3894309 - 3893041 - | major facilitator superfamily AmpG-like permease TERM 4104 3893804 - 3893788 - G 91 -6.5 -5.29445 | CTGTAACAACAAAAA CCACCAC ACG GTGACGG ACCACCCCCAAACAC TERM 4105 3894017 - 3893995 - G 76 -8.5 -4.00445 | gap 1 GACCAGTAATAACAA CGCCA-AGAC ATGT GTCTCTGGCG CAAAAAACCATAGCA TERM 4106 3894041 - 3894025 - G 71 -2.9 -5.00616 | CTCTGGCGCAAAAAA CCATAGC AGC GTCATGG CAATCAAAGAGCACA YPTB3293 3895072 - 3894299 - | putative thioesterase TERM 4107 3894426 - 3894414 - G 75 -3.3 -5.1244 | TGATTAAGATAAAAA TGCCC ACC GGGGA ACACCTGTAGCCGAA TERM 4108 3894642 - 3894657 + g 71 -4.6 -4.64676 | overlap 3894643 TAGTCCAATGTGCTG CCACCC AATT GGGTGA TTTTGTTCAAGATAC YPTB3294 3896192 - 3895065 - | hypothetical protein TERM 4109 3895123 - 3895101 - G 100 -9.8 -4.99035 | CCATTGAGATAAAAA TGTCGCCACC TTA GGTGACGCCA TCATCGGTTCGGCAA YPTB3295 3897259 - 3896189 - | hypothetical protein YPTB3296 3902922 - 3897256 - | putative siderophore biosysnthesis protein. TERM 4110 3900436 - 3900420 - G 82 -12.3 -3.19192 | CTGGAGGTAAGTTAA CGGGGAT CCA ATCCCCG GAAAGCAAGATATAA TERM 4111 3901333 - 3901309 - G 83 -9.9 -4.21933 | TGAATGCCAAAACAA GGGCGAGTCAC AAA GTGCCTCTCCC GTGTCGACCTCCTCC TERM 4112 3901660 - 3901674 + g 83 -11.4 -3.61398 | AACGATGGGCATTCT GGCGTG CCC CACGCC TTGTTGCCGCCCCCA YPTB3297 3914595 - 3902935 - | high molecular weight siderophore biosynthesis protein TERM 4113 3904625 - 3904606 - G 78 -10.8 -3.34398 | opp_overlap 3904604 3904596 3904618, overlap 3904604 TTGCTCGTGTAAATA CTGTGCAA GCCG TTGCACAG CGTGTTCAAGTTGTT TERM 4114 3906966 - 3906945 - G 77 -10.2 -3.59979 | overlap 3906963 TCCCTCCATGGCAAA GGGATTGC AGCATA GCAATCCC CTCAGGCAGGGCATC TERM 4115 3909365 - 3909379 + g 71 -7 -4.08945 | opp_overlap 3909361 3909362, overlap 3909366 GAAACCAAATAGTGC AGCGCC CCC GGCGCA TTTTCCCCGAGTAAT TERM 4116 3909366 - 3909378 + g 72 -10.5 -3.05046 | opp_overlap 3909361 3909362, overlap 3909365 AAACCAAATAGTGCA GCGCC CCC GGCGC ATTTTCCCCGAGTAA TERM 4117 3910159 - 3910145 - G 76 -9.2 -3.90586 | opp_overlap 3910152 3910155 ATACGATGGGATAAA CGCGCC CGT AGCGCG TAGCGCTCCTTTGCA TERM 4118 3910925 - 3910936 + g 71 -7.2 -4.07568 | GCCAACCATTGTTTG GGCG ATTG CGCC TTTTCAAAGCGACAG TERM 4119 3911578 - 3911597 + g 70 -2 -4.86621 | AACCTGACTTTTACT CGCCCCTA AACG TAATGGCG TTTTTCGTTGACCAT TERM 4120 3914696 - 3914732 + r 82 -5.9 -4.97461 | opp_overlap 3914698 3914700, overlap 3914698 3914700 TTTTACACCAAAATT AATATATGGCTGTATCT AAT AGTCACAGCCATATGTG TTTTTAATGTTTATT TERM 4121 3914730 - 3914698 - R 73 -8.5 -3.73858 | opp_overlap 3914696 3914698 3914700, overlap 3914700 TTACACCAAAATTAA TATATGGCTGTATCT AAT AGTCACAGCCATATG TGTTTTTAATGTTTA TERM 4122 3914698 - 3914730 + r 79 -8.5 -4.07993 | opp_overlap 3914698 3914700, overlap 3914696 3914700 TTACACCAAAATTAA TATATGGCTGTATCT AAT AGTCACAGCCATATG TGTTTTTAATGTTTA TERM 4123 3914728 - 3914700 - R 83 -11.1 -3.44148 | opp_overlap 3914698 3914696 3914700, overlap 3914698 ACACCAAAATTAATA TATGGCTGTATCT AAT AGTCACAGCCATA TGTGTTTTTAATGTT TERM 4124 3914700 - 3914728 + r 75 -8.9 -3.60412 | opp_overlap 3914700 3914698, overlap 3914698 3914696 ACACCAAAATTAATA TATGGCTGTATCT AAT AGTCACAGCCATA TGTGTTTTTAATGTT YPTB3298 3916818 - 3914746 - | TonB-dependent O.M. iron siderophore receptor/tranporter. TERM 4125 3915770 - 3915755 - G 71 -2.6 -4.84359 | overlap 3915729 TCATCTTGATAAAAA TAATAG CTCC CTATCA ACCAATTAAATGGCC TERM 4126 3916554 - 3916544 - G 81 -3.2 -5.44119 | CGCATGGTAAAAAAA CCTG CGT CAGA TGGATTGCCCGCTTT TERM 4127 3916653 - 3916670 + g 77 -2.7 -5.2112 | CAAAGCCCGTTAATA CACTTAT ACTT ATGGGTG TTTTTTGCTGCTGTT YPTB3299 3918434 - 3917202 - | peptidase T TERM 4128 3918600 - 3918621 + r 95 -13.1 -3.15544 | overlap 3918617 TGCTAGCCCGCAGGG TGAGCCTCA CGGA TGAGGCTCA TTAATCCCGATGAGC YPTB3300 3920278 - 3918722 - | putative integral membrane efflux protein. TERM 4129 3919902 - 3919891 - G 70 -2.2 -4.89852 | gap 1 CCACACCGATAAAAA CGACC GCT GG-CG TTAAAATACGCTGTG TERM 4130 3920075 - 3920054 - G 73 -7.3 -4.17556 | gap 1, opp_overlap 3920070 3920074, overlap 3920055 CATAGTGGTAATAAA GGTCACCAGT TCA ACCGGTG-CC AATATATTGGTAACT TERM 4131 3920170 - 3920150 - G 76 -8.9 -3.83756 | AAACGATAATCCAAA GGAGAGTGC CCA GCACACCCC CAGCGCATAAATAAA TERM 4132 3922361 - 3922342 - g 75 -3.6 -5.02231 | overlap 3922344 TAAAAATACTAAAAA CACTGAAT GTAC ATTCAGTC GACGACATCGAAGTC TERM 4133 3922622 - 3922608 - g 77 -6.4 -4.56597 | GCTGCGTTCGAAAAA CAGTAC CAC GCACTG GAGAATATTTACCCA TERM 4134 3922666 - 3922644 - g 76 -8.4 -4.06678 | overlap 3922645 ATTTACCCAGATAAA CTGGCGGC TGAATTG GCCGCCAA CGGGATGGCGGGCGA YPTB3301 3920994 - 3922820 + | leucine-rich repeat-containing protein TERM 4135 3922861 - 3922891 + F 89 -11.3 -3.44825 | opp_overlap 3922861, overlap 3922849 CTATGCCATAAAAAA CGGCGCATATT CTGTCCTGC AATATGCGCCG TTGATTGGTCATTTT TERM 4136 3922891 - 3922861 - f 100 -11.3 -5.26316 | opp_overlap 3922861 3922849 CTATGCCATAAAAAA CGGCGCATATT CTGTCCTGC AATATGCGCCG TTGATTGGTCATTTT TERM 4137 3924103 - 3924113 + G 75 -3.2 -5.08088 | overlap 3924089 3924101 AGAAGCTAACTCAGC TGCT TTT AGCG TTTTTCTTCACCGTT TERM 4138 3924196 - 3924177 - g 71 -5 -4.59489 | overlap 3924170 AATTTAAACAACAAA TTGCAGCA TGGT TGTTGCAA CTGGCTGGCTCACCG TERM 4139 3924759 - 3924737 - g 76 -8.4 -4.06678 | overlap 3924738 ATTTACCCAGATAAA CTGGCGGC TGAATTG GCCGCCAA CGGGATGACGGGCGA YPTB3302 3923045 - 3924922 + | leucine-rich repeat-containing protein TERM 4140 3924952 - 3924982 + T 84 -11.3 -3.14344 | opp_overlap 3924952 TTATGCCATAAAAAA CGGCGCATATT CTGTCCTGC AATATGCGCCG TTGATCACCACCATG TERM 4141 3924982 - 3924952 - T 100 -11.3 -5.26316 | opp_overlap 3924952 TTATGCCATAAAAAA CGGCGCATATT CTGTCCTGC AATATGCGCCG TTGATCACCACCATG yapH 3936148 - 3925028 - | pertactin family virulence factor/autotransporter TERM 4142 3925167 - 3925177 + g 73 -8.2 -3.92542 | AGCTCCGCAATATTC GCCG TCC CGGC TTGTTTCACCGTGAC TERM 4143 3927994 - 3928007 + g 71 -4.5 -4.58685 | CACCAAAGTCAAACG CGGTG CTGG CATCG TTTTTCGCCACATTT TERM 4144 3935904 - 3935882 - G 73 -9.9 -3.34222 | gap 1 AGTACCATTGGATAA CGC-GGCAGA AAGC TCTGCCTGCG TGCTGACAGTAATAT TERM 4145 3936608 - 3936598 - R 82 -3.2 -5.5208 | GTATAATATAAAAAA GGAA AAA TCCC ACAAAAATACAAGAA TERM 4146 3936741 - 3936731 - R 79 -3.2 -5.35224 | CTTATAAAAAGAAAA GTAG ACA CCAC AATAATTTATTAAAT TERM 4147 3936780 - 3936796 + r 82 -5.9 -5.02645 | AACAACAAGATGATT CAGTAAT GTA GTTACTG TTTATTTTATTTGTT YPTB3304 3937573 - 3936986 - | hypothetical protein TERM 4148 3937305 - 3937286 - G 73 -2.2 -5.04733 | gap 1, overlap 3937267 3937288 3937290 GAATGACAAATAAAA TCTAT-CGC CCA GCGGATAAA CAAATTTCTGTTGCC TERM 4149 3937639 - 3937621 - H 100 -12.4 -4.13995 | TGCCTACAAACTAAA CCCTCCCC CTG GGGGAAGG TCAAAGGCAGAATTG YPTB3305 3937849 - 3939339 + | enterotoxin-like protein TERM 4150 3939405 - 3939364 - T 86 -11.5 -3.34715 | opp_overlap 3939367 3939368, overlap 3939362 3939365 CACTGCCCCCAAAGA GTCACCCATACCCACCGGT CTTA ACCGGCGGGTATGGGCTTT ATGACAAAACAGCAT TERM 4151 3939404 - 3939365 - T 100 -15 -2.60615 | opp_overlap 3939367 3939368, overlap 3939364 3939362 ACTGCCCCCAAAGAG TCACCCATACCCACCGGT CTTA ACCGGCGGGTATGGGCTT TATGACAAAACAGCA TERM 4152 3939367 - 3939402 + T 100 -17.6 -3.85698 | opp_overlap 3939365 3939364 3939362, overlap 3939368 TGCCCCCAAAGAGTC ACCCATACCCACCGGT CTTA ACCGGCGGGTATGGGC TTTATGACAAAACAG TERM 4153 3939368 - 3939401 + T 100 -21.1 -2.91276 | opp_overlap 3939365 3939364 3939362, overlap 3939367 GCCCCCAAAGAGTCA CCCATACCCACCGGT CTTA ACCGGCGGGTATGGG CTTTATGACAAAACA YPTB3306 3942577 - 3939458 - | RND family drug efflux protein TERM 4154 3941251 - 3941218 - G 71 -8.9 -3.52906 | gap 1, overlap 3941216 CGATTGGCACAAATA CCG-CCATCAGCACCA GTG TGGTGGCGATGATCGG CCCGGCAATCTGGCT YPTB3307 3943900 - 3942590 - | HlyD family drug efflux protein TERM 4155 3945285 - 3945262 - g 71 -8.8 -3.67597 | opp_overlap 3945274 GCTGCCAGCGAAGAA CGTTTCCGCC ATGT GGCAGAATCG GCCAGTGATTGGTTA YPTB3308 3944338 - 3946905 + | hypothetical protein TERM 4156 3947037 - 3947083 + F 100 -15.4 -3.05384 | gap 1, opp_overlap 3947042, overlap 3947042 3947047 GGTCACAAGCGTGCA CTGAACC-CCAGATCTTGGAT CTTTTT ATCCATGATCTGGAGGTTCGG TTCAATGAAACACCC TERM 4157 3947042 - 3947078 + F 77 -10.3 -3.19192 | gap 1, opp_overlap 3947042, overlap 3947037 3947047 CAAGCGTGCACTGAA CC-CCAGATCTTGGAT CTTTTT ATCCATGATCTGGAGG TTCGGTTCAATGAAA TERM 4158 3947077 - 3947042 - f 93 -12.7 -3.06133 | opp_overlap 3947037 3947042 3947047 CAAGCGTGCACTGAA CCCCAGATCTTGGAT CTTTTT ATCCATGATCTGGAG GTTCGGTTCAATGAA TERM 4159 3947047 - 3947057 + F 75 -5.4 -4.88736 | opp_overlap 3947042, overlap 3947042 3947037 GTGCACTGAACCCCA GATC TTG GATC TTTTTATCCATGATC YPTB3309 3947088 - 3947603 + | IS1661 DNA-binding protein. TERM 4160 3948423 - 3948405 - g 72 -11 -2.73735 | overlap 3948395 3948393 3948416 AAACAGGCGGAATGA GTCCGGCA GAA TACCGGAC TCAGGTAGAAAAGCA YPTB3310 3947657 - 3948442 + | IS1661 transposase TERM 4161 3948535 - 3948566 + F 76 -9.4 -3.54543 | gap 1, overlap 3948532 GTCCACTGCGTGGAT GCCCTCCGTCA-TCG TTT CGGCTGGCGGACGGC TTTACGCGGGTCCCT TERM 4162 3948599 - 3948613 + F 95 -9.2 -4.46267 | opp_overlap 3948599 GCGTGACGCCTAAAA CGGGCG TCC TGCCCG TTTTCCTTGCCTTCT TERM 4163 3948613 - 3948599 - f 79 -8.5 -4.11216 | opp_overlap 3948599 GCGTGACGCCTAAAA CGGGC GTCCT GCCCG TTTTCCTTGCCTTCT TERM 4164 3950298 - 3950319 + G 79 -10.1 -3.74693 | TTTATTATCGAGTTC GGTGACCGC CTGA GCGATCACC TTTAATACGGTGGCA YPTB3311 3949116 - 3950324 + | putative transposase TERM 4165 3950590 - 3950563 - g 100 -7.2 -5.78622 | opp_overlap 3950563 TTATTTGAAAAAAAA CAGATTTAAAAA TCAA TTTTTGAATCTG TTAAGTATATTACTA YPTB3312 3950348 - 3950653 + | putative integral membrane protein. TERM 4166 3950903 - 3950913 + G 73 -5.4 -4.49316 | opp_overlap 3950903, overlap 3950907 AAAGGGGCTACACCA TGGT TAA ACCA TTTATTCTTGCTGCT slyB 3950902 - 3951369 + | putative outer membrane lipoprotein Pcp precursor YPTB3314 3951803 - 3951522 - | hypothetical protein TERM 4167 3951622 - 3951606 - G 74 -6.5 -4.31837 | AAGAAAGGGAACAAA CAGCCAT ACG AAGGCTG AGTATCCGGCATCAT TERM 4168 3951801 - 3951774 - G 71 -7.1 -4.08706 | opp_overlap 3951773, overlap 3951776 3951792 GTCGTAGCAGAGAAA TAGCATTGTCT GAAATA AGACAATGCTC ACATATTGTAATCTA TERM 4169 3951799 - 3951776 - G 76 -9.7 -3.6393 | opp_overlap 3951773, overlap 3951774 3951792 CGTAGCAGAGAAATA GCATTGTCT GAAATA AGACAATGC TCACATATTGTAATC YPTB3315 3952332 - 3951877 - | hypothetical protein TERM 4170 3951938 - 3951924 - G 83 -4.4 -5.49579 | opp_overlap 3951924 TCAGAAAAAATAAAA TAATAA AAC TTATTA CTGTTGATATAATGT YPTB3316 3952802 - 3952329 - | hypothetical protein YPTB3317 3953316 - 3953128 - | hypothetical protein TERM 4171 3953170 - 3953156 - G 80 -6.4 -4.80455 | opp_overlap 3953156 CAGCGAAAGAGAAAA TCGGTC AGA AACCGA TTTAAAATTGACACG motB 3954179 - 3953385 - | hypothetical protein TERM 4172 3953769 - 3953758 - G 75 -5.8 -4.5123 | overlap 3953768 AACCGACTAAAGAAA GGTG TTAA CACC GCACTACTGCGCTGG motA 3955162 - 3954296 - | flagellar motor protein MotA TERM 4173 3954940 - 3954920 - G 71 -9.1 -3.55814 | opp_overlap 3954935, overlap 3954923 3954933 CAGCAATTCATACAA CAACAACAA TAA TTGCTGTTG AAACTCAACCGTATA fliA 3955873 - 3955178 - | flagellar biosynthesis sigma factor YPTB3321 3956349 - 3955879 - | flagellar biogenesis protein TERM 4174 3956313 - 3956331 + g 100 -10.4 -5.54885 | opp_overlap 3956311, overlap 3956324 GCAATAGGAATACCC GCATTTTC ATC GAAAATGC TTTTTTCTTGGTCTT YPTB3322 3957472 - 3956375 - | putative flagellar hook-length control protein YPTB3323 3957800 - 3957474 - | hypothetical protein TERM 4175 3957719 - 3957689 - G 76 -8.3 -4.03234 | overlap 3957692 GTTTGGCGATAGAAA CCAGCAGATGAGC CACGC GCTCATCCACCAG CAACAAGCGTGGCCA fliS 3958185 - 3957802 - | putative flagellar protein TERM 4176 3957985 - 3958020 + g 87 -10.8 -4.23674 | opp_overlap 3957993 TACGCTGGTTAAGCC GTTAAGAATATTAATA CATT TATTAATACTCTTAAC TTTATGTTCATAACG fliD 3959481 - 3958195 - | putative flagellar hook-associated protein TERM 4177 3959657 - 3959633 - R 73 -5.8 -4.41844 | gap 1, opp_overlap 3959636, overlap 3959636 AAAACGTTGATAAAA GAATACCGCTC CGAA AAGCGGTA-TC GATTAAGTTCATGGC TERM 4178 3959655 - 3959636 - R 82 -8.6 -4.31397 | opp_overlap 3959636, overlap 3959633 ACGTTGATAAAAGAA TACCGCTC CGAA AAGCGGTA TCGATTAAGTTCATG flaA 3960903 - 3959701 - | putative flagellin TERM 4179 3959932 - 3959959 + g 71 -2.7 -4.9792 | gap 1, opp_overlap 3959931 3959930 CGTGGCACGGAAAGC GCCGT-AGGCGT CAATC ACGTCTGACAGC TTTTTATCTGCCATC TERM 4180 3961412 - 3961423 + H 73 -3.6 -5.00616 | opp_overlap 3961405 GCGGACAACAAATCG CGGG TTTG CCTG TTTTTTGAACCCACC YPTB3327 3961527 - 3962573 + | putative regulatory protein YPTB3328 3962554 - 3963000 + | hypothetical protein TERM 4181 3963066 - 3963033 - T 82 -6 -5.00616 | gap 1, overlap 3963034 3963035 CTGGGGCTGAAAAAA CGGCTGACATGTGCG ATCAA CGCACATG-CAGCTT GAAGAATAACGGGTA TERM 4182 3963065 - 3963034 - T 78 -9.5 -3.60048 | gap 1, overlap 3963033 3963035 TGGGGCTGAAAAAAC GGCTGACATGTGCG ATCAA CGCACATG-CAGCT TGAAGAATAACGGGT TERM 4183 3963064 - 3963035 - T 91 -13 -2.75708 | gap 1, overlap 3963034 3963033 GGGGCTGAAAAAACG GCTGACATGTGCG ATCAA CGCACATG-CAGC TTGAAGAATAACGGG YPTB3329 3964160 - 3963147 - | hypothetical protein flgL 3965095 - 3964172 - | flagellar hook-associated protein FlgL TERM 4184 3964321 - 3964334 + g 79 -2.4 -5.44721 | TGGCATTCGACAGCT CCAT CTCTTC ATGG TTTTTTTGCAGTAAT flgK 3966485 - 3965124 - | flagellar hook-associated protein FlgK flgJ 3966891 - 3966598 - | peptidoglycan hydrolase TERM 4185 3966847 - 3966870 + g 73 -7.4 -4.26871 | gap 1, opp_overlap 3966848 3966849, overlap 3966848 3966849 GAGGTCACCGACAAA AC-TCCCCGGT ATC ACCGGGGATGA TTTATTAATGGCTTC TERM 4186 3966868 - 3966848 - G 91 -11.1 -4.42653 | opp_overlap 3966847 3966848 3966849, overlap 3966849 AGGTCACCGACAAAA CTCCCCGGT ATC ACCGGGGAT GATTTATTAATGGCT TERM 4187 3966848 - 3966869 + g 76 -10.9 -3.154 | gap 1, opp_overlap 3966848 3966849, overlap 3966847 3966849 AGGTCACCGACAAAA C-TCCCCGGT ATC ACCGGGGATG ATTTATTAATGGCTT TERM 4188 3966849 - 3966867 + g 91 -14.6 -3.12942 | opp_overlap 3966848 3966849, overlap 3966848 3966847 GGTCACCGACAAAAC TCCCCGGT ATC ACCGGGGA TGATTTATTAATGGC TERM 4189 3966867 - 3966849 - G 91 -14.6 -3.2511 | opp_overlap 3966849 3966848 3966847, overlap 3966848 GGTCACCGACAAAAC TCCCCGGT ATC ACCGGGGA TGATTTATTAATGGC flgI 3968076 - 3966901 - | flagellar basal body P-ring protein TERM 4190 3967322 - 3967294 - G 71 -6.6 -4.14541 | gap 1, opp_overlap 3967299 CAGCAATGACATAAA CGCCACGCG-CGC ACCG GCGTCTTGTGGCG CATTGACCATAACGT flgH 3968755 - 3968090 - | flagellar basal body L-ring protein TERM 4191 3968274 - 3968290 + g 80 -7.3 -4.56775 | ATATATTCATCGCCC TGGTTGA GGG TCAGCCA TTTTTCGCCACGGAT flgG 3969575 - 3968790 - | flagellar basal body rod protein FlgG flgF 3970374 - 3969643 - | flagellar basal body rod protein FlgF TERM 4192 3969827 - 3969853 + g 78 -5.9 -4.73105 | gap 1 TCACGGGCCGCCGGG CCACGG-TTACT GACC AGTAAACCGCGG TTATTTTTTCTGAGT TERM 4193 3970113 - 3970123 + g 73 -5.4 -4.57073 | CGCTGAGCACCGCGA TCAG CCC CTGA TTTTTAAGGGCAATA flgE 3971618 - 3970374 - | flagellar hook protein FlgE TERM 4194 3971261 - 3971245 - G 75 -11.5 -2.62184 | opp_overlap 3971258 CCCGCCTGGATATTA CCGGCAG CAT CCGCCGG GTAGCCCTGTAATTT flgD 3972329 - 3971673 - | flagellar basal body rod modification protein flgC 3972757 - 3972332 - | flagellar basal body rod protein FlgC flgB 3973206 - 3972760 - | flagellar basal body rod protein FlgB TERM 4195 3974051 - 3974034 - g 75 -3.3 -5.17576 | overlap 3974035 TATCAAGGTAAAAAA CCTCAGC AGTG GCCGAGT GGTGACCGCCACGGT flgA 3973399 - 3974112 + | flagellar basal body P-ring biosynthesis protein FlgA YPTB3342 3974322 - 3974588 + | putative flagellar regulatory protein. YPTB3343 3974595 - 3975020 + | hypothetical protein TERM 4196 3975106 - 3975073 - T 75 -8.3 -3.87994 | opp_overlap 3975050 3975064 3975059 3975067 3975097, overlap 3975059 ACTTAGGTCTATAAA CCTAGGTCTATAAAC TTAG GTCTATAAACTTAGG TCTGTGAGTTTATTT TERM 4197 3975331 - 3975302 - T 100 -15.9 -5.4833 | opp_overlap 3975302 CCACCCAATAAAAAA TCCGTCATAGAGA ATAT TCCCTATGACGGA TTTTTTTATGGTCGC TERM 4198 3975302 - 3975331 + T 100 -13.7 -5.67063 | opp_overlap 3975302 CCACCCAATAAAAAA TCCGTCATAGAGA ATAT TCCCTATGACGGA TTTTTTTATGGTCGC YPTB3344 3975799 - 3975362 - | hypothetical protein fliI 3977143 - 3975803 - | flagellum-specific ATP synthase TERM 4199 3977089 - 3977069 - G 79 -11.8 -3.15544 | opp_overlap 3977065 CGTCACTCGCACTAA CCGGCCCG CCACT CGGGCCAG ATGAATGTTTTCGAT fliH 3977852 - 3977136 - | flagellar assembly protein H TERM 4200 3977174 - 3977164 - G 73 -3.2 -5.00616 | GGTTCCGTCAAAAAA CTGC TGT GCAA CGCACCAATGCATTG TERM 4201 3977820 - 3977838 + g 80 -3.8 -5.252 | overlap 3977823 AACCCGCAGTTTCAC TGCCCC CGCCCGT GGGGTA TTTTTTATCGACATC fliG 3978900 - 3977857 - | flagellar motor switch protein G fliF 3980512 - 3978872 - | flagellar MS-ring protein TERM 4202 3980443 - 3980454 + gr 79 -3 -5.28983 | AAAGGGCTGCCGCGC TCAT AAGA ATGA TTTTTGTATTTTCAC fliE 3980902 - 3980522 - | flagellar hook-basal body complex protein fleR 3981947 - 3980919 - | sigma-54 transcriptional regulatory protein TERM 4203 3982716 - 3982751 + G 70 -7.6 -3.82262 | AAAATGCTAACCAGC CAGATGGGTAATATCG CATT CGATATCGACCGTCTG TTGTTACTTAACATT TERM 4204 3982893 - 3982880 - g 74 -3.1 -5.1361 | AGAAAGGCTAAAAAA CAAAC TCGG GCTTG AAATAACCGATCTCT TERM 4205 3983128 - 3983108 - g 91 -3.9 -5.67967 | AGCAGTAGAAAAAAA TGTCTCACT GTC AGAGAGGCA ACTTGAATACTTAGT fliM 3982458 - 3983369 + | putative flagellar motor switch protein. TERM 4206 3983731 - 3983719 - g 73 -3.4 -4.90266 | opp_overlap 3983719 GTGATTAATGAAAAA TACG GCCTG CGTA TTATTAACATCAATA fliN 3983362 - 3983775 + | flagellar switch protein TERM 4207 3983818 - 3983841 + G 73 -10.2 -3.10499 | overlap 3983839 TGACCATCATCAGCC GCGGCCTGCT GGTG GGCGGGCTGC TGTATTCCCCTCTTC fliP 3983772 - 3984542 + | flagellar biosynthesis protein FliP fliQ 3984544 - 3984816 + | putative flagellar assembly/export protein, fliQ fliR 3984823 - 3985596 + | putative flagellar assembly/export protein, fliR TERM 4208 3985639 - 3985629 - g 73 -4.6 -4.76312 | overlap 3985630 3985633 GAGAAGAGTGAAAAA CCCA CAG CGGG GAAGCTGTCGAAAGC TERM 4209 3986268 - 3986251 - g 71 -2.7 -4.94243 | CCAAAAAAATGAAAA TGACC AAACAGGA GGTCA AACAAGAGCATAAAA flhB 3985596 - 3986729 + | flagellar biosynthesis protein FlhB TERM 4210 3987870 - 3987856 - g 76 -10 -3.74178 | overlap 3987844 GAATCAAAGGGTAAA CCGTTG AAC CAACGG CTACGTGGCGTGCGA flhA 3986716 - 3988812 + | flagellar biosynthesis protein FlhA YPTB3358 3989015 - 3989584 + | putative lipoprotein TERM 4211 3989610 - 3989645 + F 100 -12 -4.39426 | opp_overlap 3989607 3989606 ACGGAAGAAGAGGGA TCGCCACAGTAAGC GAGTATGA GATTACTGTGGCGA TTTTATGGCCCTGTA TERM 4212 3990656 - 3990646 - f 86 -3.2 -5.72616 | ATCCACAGAAAAAAA CCAC CGC GTAG GGAAAGAATATTCAT fepB 3991527 - 3992606 + | iron-enterobactin transporter periplasmic binding protein TERM 4213 3992635 - 3992618 - T 74 -4.1 -4.98436 | CTAACAGCATAAAAA GCGAC ACTTATTG GTCGC TTGAGGTTATTGACA YPTB3361 3993921 - 3992818 - | fimbrial protein TERM 4214 3993470 - 3993482 + g 77 -6.3 -4.5448 | AGTTGGACCGTGACT CGATT AGC AATCG TTATTTTTGTCCCTG YPTB3362 3994665 - 3993946 - | fimbrial chaperone protein TERM 4215 3994445 - 3994467 + g 74 -4.1 -4.93316 | CGCTGAACTGGTGGC GTTGCCACT AACGG GGTGGTGAC TTTTTGCTGTTGTTC YPTB3363 3997163 - 3994683 - | outer membrane fimbrial usher porin TERM 4216 3997415 - 3997437 + r 100 -9.2 -5.15117 | opp_overlap 3997415 TTTCATAGAAAAAAA GCATGTGG CATTTCT CCACATGC TTTTTTAAAATTTTA TERM 4217 3997437 - 3997415 - R 100 -9.2 -5.71712 | opp_overlap 3997415 TTTCATAGAAAAAAA GCATGTGG CATTTCT CCACATGC TTTTTTAAAATTTTA smfA 3998000 - 3997470 - | fimbrial protein TERM 4218 3999003 - 3999023 + H 72 -6.3 -4.24404 | opp_overlap 3998998, overlap 3999005 CACCTAAATATACTT TATGAAAAT AGC ATTTTCATG TTTTGAGGTTTACGT TERM 4219 3999573 - 3999554 - g 73 -3.4 -5.0065 | overlap 3999556 TAGTTATAAAGAAAA CTCGACGG TAAT CCCTCGGG CATTAAAAACAGTAA chiC 3999120 - 4000535 + | chitinase TERM 4220 4000596 - 4000584 - f 77 -3.5 -5.09225 | ATTCCACTGAAAAAA TTAAT ATT ATTAA GGAATATATGATGAA TERM 4221 4000863 - 4000848 - g 100 -9 -4.7173 | overlap 4000850 CATTAGACGGAAAAA TCGCCA GTGC TGGCGA AAGCACTGGGCAAAT YPTB3366 4000604 - 4002013 + | hypothetical protein TERM 4222 4002059 - 4002088 + F 84 -5.1 -5.32396 | gap 1, opp_overlap 4002065 4002066, overlap 4002066 TTAGCGATAAGGTTA ATAAAAGGGTCAGC ATT GCTGGCC-TTTTAC TTTTATTTTTACTCT TERM 4223 4002066 - 4002082 + F 100 -10.1 -4.83677 | opp_overlap 4002066 4002065, overlap 4002059 TAAGGTTAATAAAAG GGTCAGC ATT GCTGGCC TTTTACTTTTATTTT TERM 4224 4002790 - 4002820 + F 100 -13.3 -5.16038 | opp_overlap 4002781 4002782 4002784 GGTAAAGCAGACTCA GCCCTAAGCCTGG TCTCT CCGGTCTTAGGGC TTTTCTTTATTCTCT TERM 4225 4003571 - 4003559 - g 71 -4.8 -4.56597 | TTCTCTCCGGAAAAA CGCT GCTTA AGCG GGCCCGGTGGAACAG YPTB3368 4003499 - 4004086 + | hypothetical protein YPTB3369 4004309 - 4004506 + | hypothetical protein TERM 4226 4004549 - 4004519 - f 86 -9.8 -4.01853 | opp_overlap 4004510 4004523, overlap 4004510 4004521 4004523 TAATATTATTAGAAA TATATATGGTAGCC ATC GGCTACCATATTTT TCGCCTCACTATTAG TERM 4227 4004547 - 4004521 - f 100 -12.4 -3.59266 | opp_overlap 4004523, overlap 4004519 4004523 ATATTATTAGAAATA TATATGGTAGCC ATC GGCTACCATATT TTTCGCCTCACTATT TERM 4228 4004545 - 4004523 - f 100 -15 -3.3663 | opp_overlap 4004523, overlap 4004521 4004519 ATTATTAGAAATATA TATGGTAGCC ATC GGCTACCATA TTTTTCGCCTCACTA TERM 4229 4004523 - 4004545 + F 100 -15 -4.62783 | opp_overlap 4004523 4004521 4004519 ATTATTAGAAATATA TATGGTAGCC ATC GGCTACCATA TTTTTCGCCTCACTA YPTB3370 4004573 - 4004995 + | hypothetical protein YPTB3371 4005047 - 4005943 + | putative membrane protein. TERM 4230 4005984 - 4005970 - g 83 -2.2 -5.63645 | TTAAAAGATAAAAAA CAAAAT ATA ATTTTA TTCTTGTCTATTGTT rcpA 4005940 - 4007259 + | putative outer membrane secretin family protein YPTB3373 4007256 - 4007546 + | hypothetical protein TERM 4231 4008105 - 4008076 - g 100 -4.3 -5.96894 | overlap 4008078 ACCCAAATAAAAAAA TCGCCTACCTTGT TATT ACAAGGCAATCAA GGCTCGCAAGATCTC YPTB3374 4007557 - 4008684 + | hypothetical protein YPTB3375 4008696 - 4009982 + | putative type IV secretion ATPase YPTB3376 4009979 - 4010854 + | putative integral membrane protein. TERM 4232 4011475 - 4011452 - g 88 -8.2 -4.67563 | opp_overlap 4011452 4011451 4011449, overlap 4011466 CAATAGAAATGAAAA TGTTTTGCAG CACA CTGCAATACA GTATTAGTTTTGGCT YPTB3377 4010851 - 4011684 + | hypothetical protein TERM 4233 4011696 - 4011710 + G 77 -4.3 -5.0916 | TTAATACTATTATTA TCATC CCAGT GATGA TTTTTCTGTTAAGCG YPTB3378 4011668 - 4012438 + | hypothetical protein YPTB3379 4012435 - 4012908 + | hypothetical protein YPTB3380 4012892 - 4013464 + | hypothetical protein TERM 4234 4013513 - 4013533 + G 80 -2.6 -5.45652 | overlap 4013514 AAAACAATGATAACT TTCATACT AGAGA AGTGTGAG TTTTTTATTAAAAAT TERM 4235 4013658 - 4013644 - g 71 -6.4 -4.1899 | TCACTTTATCCAAAA GAGAGC TAA ACTCTC TGATGCCCTTGAACA YPTB3381 4013489 - 4015045 + | putative membrane protein. TERM 4236 4015101 - 4015141 + T 88 -9.7 -4.17316 | opp_overlap 4015101 4015102, overlap 4015102 TCCTCAAAAACCAAA GTTGATGCAAGCGCGGTAA CAG TAACCGCGCTTGCAAAAAA TTATTTTGCGCCGCT TERM 4237 4015141 - 4015101 - T 93 -9.7 -4.32046 | opp_overlap 4015101 4015102, overlap 4015102 TCCTCAAAAACCAAA GTTGATGCAAGCGCGGTAA CAG TAACCGCGCTTGCAAAAAA TTATTTTGCGCCGCT TERM 4238 4015102 - 4015140 + T 95 -13.2 -3.09908 | opp_overlap 4015101 4015102, overlap 4015101 CCTCAAAAACCAAAG TTGATGCAAGCGCGGTAA CAG TAACCGCGCTTGCAAAAA ATTATTTTGCGCCGC TERM 4239 4015140 - 4015102 - T 95 -13.2 -3.18505 | opp_overlap 4015102 4015101, overlap 4015101 CCTCAAAAACCAAAG TTGATGCAAGCGCGGTAA CAG TAACCGCGCTTGCAAAAA ATTATTTTGCGCCGC YPTB3382 4015567 - 4015142 - | biopolymer transport protein ExbD YPTB3383 4016614 - 4015577 - | MotA/TolQ/ExbB proton channel family protein TERM 4240 4017261 - 4017237 - g 83 -5 -5.2696 | gap 1, overlap 4017239 GTAAAAGCGAAAAAA CA-TGCCACGA TCAA TCGGGGCAATG GTGAGTTGTTCTATG TERM 4241 4017258 - 4017239 - g 75 -7.8 -4.24654 | overlap 4017237 AAAAGCGAAAAAACA TGCCACGA TCAA TCGGGGCA ATGGTGAGTTGTTCT metC 4017093 - 4018304 + | cystathionine beta-lyase YPTB3385 4018497 - 4019159 + | DedA family membrane protein TERM 4242 4019206 - 4019190 - T 75 -5.8 -4.65916 | opp_overlap 4019190 TCCAGGTGAATAAAA CGGCAT CTAAT ACGCCG TTTCTATGAAGCCTT YPTB3386 4020144 - 4019251 - | AraC family transcription regulator TERM 4243 4020443 - 4020431 - H 80 -4.8 -5.17353 | ATATTGACGAAAAAA GTGC TCCAG GCAC AGTGATGTGGTTACG TERM 4244 4020635 - 4020618 - g 71 -6.9 -4.21631 | opp_overlap 4020616 4020618 AATTGACTCAAGAAA TCCCGGC GGAT GCCCGGA TATTGATTACCTACG YPTB3387 4020542 - 4021699 + | putative iron-containing alcohol dehydrogenase TERM 4245 4021692 - 4021702 + F 76 -6.8 -4.55721 | GTATCTATGAAGCGG CGGT ATA ACCG TTTTATGTAAGATTT TERM 4246 4021783 - 4021753 - f 93 -9.7 -4.2558 | opp_overlap 4021750 TATCTCGTACCAAAA CTGGCGGCATTAC CGCAT GTCATGCTGCCAG TCCTCCTGTTTATAC TERM 4247 4022073 - 4022048 - f 71 -3.4 -4.99645 | overlap 4022066 AGGTCATAAATAAAA TGATAACG ACTAAACTTA CGTTATCA GCAACGGGCTAATAC dkgA 4022118 - 4022951 + | 2,5-diketo-D-gluconate reductase A YPTB3389 4025336 - 4022973 - | hypothetical protein TERM 4248 4024675 - 4024699 + g 72 -5.8 -4.36914 | CGCATCACAACGGTG TTACGGACAT CCTGA ATATCCGTAA TTTTCTCACCCGCAG TERM 4249 4025513 - 4025501 - R 78 -9.1 -3.83409 | GTACATATCAGTAAA CCTGC GAA GCAGG CAAGCGAGACATGCG TERM 4250 4025670 - 4025649 - R 72 -7.9 -3.79021 | CAAAACGTGATCAAA GCGTCGGTG CTGC CACCGTCAC TAACTGCCCCGCCGA sufI 4027068 - 4025644 - | repressor protein for FtsI TERM 4251 4026935 - 4026924 - G 93 -7.2 -5.47399 | GCAAGGTTAAAAAAA GCGG TTGG CCGC GGCGAGATTCTAATA plsC 4027978 - 4027247 - | putative acyltransferase (LPAAT) TERM 4252 4027543 - 4027566 + g 75 -3.2 -5.04987 | TGCGTGTGCCTTCTG GGAACATC CAAATAGA GATGTTTC TTTTTTGCACCTGTT parC 4030522 - 4028249 - | DNA topoisomerase IV subunit A TERM 4253 4029309 - 4029294 - G 73 -4.6 -4.81249 | opp_overlap 4029294 4029293 TCCGAAATGGAAAAA CGCTGC ATCA GTAGCG GTTTAGGATCATCTT TERM 4254 4029733 - 4029769 + g 86 -8 -5.00616 | gap 1, overlap 4029736 4029737 TCGCGCCGGAAACCT GATG-TGGTAACGCCGT GATC ACGGCGCTGCCATCTTC TTTTTTCCACACCGC TERM 4255 4029736 - 4029766 + g 83 -8.3 -4.61482 | gap 1, overlap 4029733 4029737 CGCCGGAAACCTGAT G-TGGTAACGCCGT GATC ACGGCGCTGCCATC TTCTTTTTTCCACAC TERM 4256 4029737 - 4029764 + g 91 -12 -3.91465 | overlap 4029736 4029733 GCCGGAAACCTGATG TGGTAACGCCGT GATC ACGGCGCTGCCA TCTTCTTTTTTCCAC TERM 4257 4030297 - 4030324 + g 83 -4.8 -5.22039 | gap 1, overlap 4030298 GCGGATGATATTTAC CCAGCACGTCACC CAC GGT-ACGGGCTGA TTTTTTGAATTTAGC TERM 4258 4030298 - 4030323 + g 71 -8.3 -3.72139 | gap 1, overlap 4030297 CGGATGATATTTACC CAGCACGTCACC CAC GGT-ACGGGCTG ATTTTTTGAATTTAG mdaB 4030826 - 4031410 + | putative modulator of drug activity TERM 4259 4031417 - 4031443 + T 100 -17.3 -4.4715 | AACAGCTAAGCGGTT CGGCCCTCCTC TCTCT GGGGAGGGCCG TTTTATACGTTACCC YPTB3394 4032379 - 4031468 - | LysR family regulatory protein parE 4034278 - 4032383 - | DNA topoisomerase IV subunit B TERM 4260 4033069 - 4033105 + g 86 -8 -5.00616 | opp_overlap 4033068 4033069, overlap 4033072 CCTGCGAAGTACAAT CTG-CCAGTTTGCCAGGC AGT GCCGGGCCA-CTGGTCAG TTTTTTACGCACCAC YPTB3396 4034961 - 4034380 - | esterase YqiA icc 4035860 - 4034961 - | cyclic 3',5'-adenosine monophosphate phosphodiesterase YPTB3398 4036294 - 4035869 - | hypothetical protein nudF 4036960 - 4036328 - | ADP-ribose pyrophosphatase NudF TERM 4261 4037971 - 4037986 + G 71 -6.8 -4.30987 | opp_overlap 4037956 GCACTAGAGAGCTTG CGCCAG ATTA CTGGTG TTTATTATCCCGAAT tolC 4037356 - 4038750 + | outer membrane channel protein TERM 4262 4038783 - 4038817 + F 100 -10.6 -5.09895 | overlap 4038787 CGTCAGCGGTTTGGC TTCACCGGGCACAGTC ATT GGCTGCGCCCGGTTTA TTTTTTGCCTCCCTC TERM 4263 4038787 - 4038813 + F 100 -15.8 -5.0666 | overlap 4038783 AGCGGTTTGGCTTCA CCGGGCACAGTC ATT GGCTGCGCCCGG TTTATTTTTTGCCTC TERM 4264 4039733 - 4039712 - g 73 -7.3 -4.23723 | gap 1, opp_overlap 4039702, overlap 4039702 CAACATCATCCAAAA CCACCACACG TAG CATG-GGTGG TTAAGGCTGATTAAT YPTB3401 4039051 - 4039737 + | hypothetical protein TERM 4265 4039967 - 4039942 - g 71 -4.7 -4.58283 | overlap 4039953 CAAGTGGTTGAAAAA GTCATTAACAG CGAT CAGTTACTGAC CAAGTGCCGTATCCC YPTB3402 4039747 - 4040907 + | hypothetical protein TERM 4266 4040945 - 4040909 - T 74 -10.3 -2.57564 | opp_overlap 4040918, overlap 4040908 4040913 4040917 TTATTTTGGGATAAT TATAGTAAGGGAAGGCA ATG CACCTTCCTTTACCATA CCCAAAGTCATTGCC YPTB3403 4041850 - 4041068 - | hypothetical protein ribB 4042962 - 4042309 - | 3,4-dihydroxy-2-butanone 4-phosphate synthase YPTB3405 4043532 - 4043813 + | hypothetical protein TERM 4267 4044017 - 4043991 - T 84 -10.1 -3.82218 | gap 1, overlap 4043992 4044007 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 4268 4044018 - 4043992 - T 72 -10.1 -2.88849 | gap 1, overlap 4043991 4044007 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT asoB 4045388 - 4044138 - | inner membrane protein YjeH TERM 4269 4045331 - 4045313 - G 75 -5.2 -4.8048 | overlap 4045314 CTGGCACAGCAAAAA CCCCCGTC CCC AACAGGGA AGTGGATAACAACCC TERM 4270 4045403 - 4045420 + r 86 -12.7 -2.52464 | CTGCCACATCCTTAT GCGCCAG CGCT CTGGCGC TGACTTAGCCGCGGC rfaE 4046855 - 4045425 - | bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase TERM 4271 4046518 - 4046537 + g 70 -7.9 -3.80573 | CGGATTAACTGCTGG TTACGGG AAAGTA CCCGTAA TTTGGTAATGGTCGG TERM 4272 4046665 - 4046652 - G 70 -9.5 -3.18681 | GGTCAACCCGACTAA GCGCG CAAC CGCGC CAAGGGAGGCAATAT glnE 4049845 - 4046990 - | bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase TERM 4273 4047377 - 4047417 + g 81 -11.2 -3.73224 | gap 1 CCGCATTTCGCGGAC TTC-CTGCTGCAACTGCGG ATCT TCGCGGTGGCGGCAGAGAA TTTGCTGGCGAATAG YPTB3409 4051300 - 4049993 - | hypothetical protein TERM 4274 4050518 - 4050502 - G 73 -5.1 -4.64657 | overlap 4050504 4050512 CCAAACCGCCAAAAA TAGCCAA CGA TTGGCGA ACCATAGCCAAAGCG TERM 4275 4050516 - 4050504 - G 70 -7.7 -3.9318 | overlap 4050502 4050512 AAACCGCCAAAAATA GCCAA CGA TTGGC GAACCATAGCCAAAG YPTB3410 4051604 - 4052224 + | putative signal transduction protein TERM 4276 4052810 - 4052832 + G 100 -12.7 -4.21275 | overlap 4052809 CCATTGCGCGTTCTG CGGGTGGCA CGCTT TGCCGCCCG TTTTGCCTACCTTGG cca 4052402 - 4053640 + | multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase TERM 4277 4053659 - 4053677 + T 75 -8.8 -3.58343 | opp_overlap 4053674 ACTCCCCGTTCGTTT CCCCCTGT AAA ACAAGGGG TTTCAGACTCCTGCC uppP 4054694 - 4053876 - | undecaprenyl pyrophosphate phosphatase TERM 4278 4054758 - 4054736 - R 100 -8.4 -5.77632 | opp_overlap 4054736 AAAACCACAAAAAAA CGGCAATGCT GAA AACAGTGCCG TTCTATTTAGAATTT folB 4055327 - 4054968 - | bifunctional dihydroneopterin aldolase/dihydroneopterin triphosphate 2'-epimerase YPTB3414 4055435 - 4056085 + | putative glycerol-3-phosphate acyltransferase PlsY TERM 4279 4056137 - 4056098 - T 100 -12.1 -4.07885 | overlap 4056105 4056121 TAGTTTTCCCCAAAA CCGAGAATGGCTGCGGC AACACA GCCACAGCCACGCCCAG CCATTCGACACCCCT TERM 4280 4056130 - 4056105 - T 100 -12.6 -3.52113 | overlap 4056098 4056121 CCCCAAAACCGAGAA TGGCTGCGGC AACACA GCCACAGCCA CGCCCAGCCATTCGA TERM 4281 4056179 - 4056121 - T 79 -11.1 -3.06696 | gap 1, overlap 4056105 4056098 GGCTGCGGCAACACA GCCACAGCCACGCCCAGCCATTC-GACA CCCC TATCAGAATGACTGAGCATGAGCGAGGC AAGGCGCAAAGGAAT TERM 4282 4056224 - 4056202 - T 76 -2.7 -5.33921 | gap 1, opp_overlap 4056202, overlap 4056204 4056206 AAAGGAATGAAAAAA CGCAGTGGAC TCTT GTCCA-TGAG TATTTTGAATGACTG TERM 4283 4056256 - 4056237 - T 76 -10.7 -2.72661 | overlap 4056250 GAGTATTTTGAATGA CTGCGGC AACACA GCCGCAG CCACGCTCAGCCATT TERM 4284 4056314 - 4056289 - T 100 -12.6 -3.47841 | overlap 4056305 ACACCCATATCAGAA TGACTGCGGC AACGCA GCCGCAGCCA CGCTCAGCCATTCTG TERM 4285 4056369 - 4056355 - T 76 -9.2 -3.551 | TGGTAACTCAGATAA CGGCCA CCG CGGCCG CACCGACACACTCAA gcp 4057344 - 4056331 - | O-sialoglycoprotein endopeptidase rpsU 4057757 - 4057972 + | 30S ribosomal protein S21 TERM 4286 4058046 - 4058073 + F 100 -13.4 -3.94823 | opp_overlap 4058045 4058046 TAGTTGCATACGAAG GCCGTGCTTTCC GAAA GGAATGCGCGGC TTGTTCTCGTTTATG TERM 4287 4058073 - 4058046 - f 76 -11.2 -2.55668 | opp_overlap 4058046, overlap 4058045 TAGTTGCATACGAAG GCCGTGCTTTCC GAAA GGAATGCGCGGC TTGTTCTCGTTTATG TERM 4288 4059698 - 4059708 + G 74 -6.8 -4.37092 | overlap 4059696 ATTGTAGAGGATATG GTCG AAC CGAC TTTTGTCGACACGCT dnaG 4058108 - 4059856 + | DNA primase TERM 4289 4059904 - 4059885 - f 81 -9.3 -3.87869 | TTAATTGCCGATAAA TGTGGGG GCAACT CCCCACA ATATGCCGCTATAGC TERM 4290 4060749 - 4060724 - g 77 -3.1 -5.24551 | overlap 4060725 GGAAATCAAGAAAAA TGGCCGCAATC ACGC GAATGCTGCCG CTGAAATTCTGAAGC rpoD 4060014 - 4061852 + | RNA polymerase sigma factor RpoD TERM 4291 4061875 - 4061899 + T 100 -8.6 -5.90981 | opp_overlap 4061875 4061865 GTGAAGTAATAAAAA TCCCGGCATA TTATT TGTGTCGGGA TTTTTTTTCCTATAA TERM 4292 4061899 - 4061875 - T 78 -4.2 -5.1963 | opp_overlap 4061875, overlap 4061865 GTGAAGTAATAAAAA TCCCGGCATA TTATT TGTGTCGGGA TTTTTTTTCCTATAA TERM 4293 4062162 - 4062132 - T 100 -9.8 -4.93877 | opp_overlap 4062135, overlap 4062135 GGCCACCAAATAAAA CAAGGAGTTACGTT AAT AGCGTAACTCCTTT GTTGTTTCTGGGATA TERM 4294 4062159 - 4062135 - T 100 -11.5 -4.56436 | opp_overlap 4062135, overlap 4062132 CACCAAATAAAACAA GGAGTTACGTT AAT AGCGTAACTCC TTTGTTGTTTCTGGG TERM 4295 4062135 - 4062159 + T 100 -13.7 -4.63048 | opp_overlap 4062135 4062132 CACCAAATAAAACAA GGAGTTACGTT AAT AGCGTAACTCC TTTGTTGTTTCTGGG YPTB3419 4062972 - 4062370 - | hypothetical protein YPTB3420 4063444 - 4062989 - | hypothetical protein YPTB3421 4063941 - 4063471 - | hypothetical protein YPTB3422 4065326 - 4063950 - | hypothetical protein TERM 4296 4064124 - 4064155 + g 71 -10.2 -2.78679 | opp_overlap 4064153, overlap 4064123 ATCTAGCGGTAGTTT GTGGTGTACCTGAT AACC ATCGGGTACAACGC CTTTGGCTAGGACGC TERM 4297 4066359 - 4066344 - R 74 -4 -5.00616 | TTTCTGTGCAAAAAA TTGAGC AGCA ACTCAA ACAAAATCTGGCACA YPTB3424 4068338 - 4067382 - | LysR family regulatory protein YPTB3425 4068500 - 4069216 + | hypothetical protein YPTB3426 4069476 - 4069778 + | hypothetical protein YPTB3427 4070397 - 4069993 - | putative translational inhibitor protein TERM 4298 4070124 - 4070099 - G 78 -6.1 -4.82901 | GCGCCCTCATAAAAA GCCCCGATTTG TGCG CAAATTGCGGC CAAATTCGCCGGTGA TERM 4299 4070361 - 4070345 - G 71 -2.9 -4.91511 | ACCGCATGAGAAAAA CCGAATG GCA CACTGGG GTACATCGTCTCGGG YPTB3428 4071062 - 4070682 - | putative translational inhibitor protein YPTB3429 4071705 - 4071073 - | hypothetical protein TERM 4300 4071494 - 4071504 + g 71 -4 -4.7497 | ATGATAAAATCACGT TCTT CCC AAGA TTTTTCATGGATAAG YPTB3430 4072285 - 4071839 - | hypothetical protein YPTB3431 4073740 - 4072289 - | NhaC family Na+/H+ antiporter TERM 4301 4073690 - 4073680 - G 76 -2.4 -5.25699 | opp_overlap 4073687 4073688 ACGACACAATAAAAA GCAG CAT CGGC AGTAATGCCATATTT YPTB3432 4074965 - 4073733 - | putative aminotransferase TERM 4302 4074874 - 4074890 + g 79 -2.2 -5.44721 | opp_overlap 4074874 ATGAGATCCAATACA GCGG TACCAACAT CCGC TTTTTTTACACTGCT YPTB3433 4075436 - 4075543 + | hypothetical protein YPTB3434 4075716 - 4075916 + | hypothetical protein TERM 4303 4076008 - 4075979 - g 74 -6.3 -4.39287 | opp_overlap 4075979 TTAACGACAGCAAAA CAGGCGCTATGGC GTGG GCCATTGATCCTG TTATCGGCTATAGCG YPTB3435 4075913 - 4076248 + | hypothetical protein YPTB3436 4076258 - 4077307 + | multidrug resistance protein MdtN YPTB3437 4077291 - 4079192 + | PET family efflux transporter YPTB3438 4079197 - 4080723 + | Outer membrane factor (OMF) family efflux porin YPTB3439 4082970 - 4080787 - | putative glycosyl hydrolase TERM 4304 4081649 - 4081671 + g 70 -9.9 -3.18383 | gap 1 GTGATCACCTTAACC TCCC-CTGCG ATAG CGCAGAGGGA TTGATAGATCGACAT TERM 4305 4082250 - 4082237 - G 71 -4.5 -4.64766 | overlap 4082238 CCGAGATCGCAAAAA CCGGT CATC ACCGA GCCAACGCCTGCCTC YPTB3440 4083536 - 4083021 - | hypothetical protein TERM 4306 4083176 - 4083160 - G 82 -12.3 -3.10164 | opp_overlap 4083159 4083161 CGAGCCAGCAGGCAA GTTGCCG CTT CGGCAAC GAAGCGGGTATCAAT YPTB3441 4084351 - 4083533 - | ABC sugar transporter, permease subunit TERM 4307 4083833 - 4083820 - G 79 -2.3 -5.42259 | overlap 4083805 4083821 CCACCTTGAAAAAAA TGGTG AATT CACCT GCGCCATCGATCCTG YPTB3442 4085232 - 4084351 - | ABC sugar transporter, permease subunit YPTB3443 4086530 - 4085286 - | ABC transporter, periplasmic sugar binding protein YPTB3444 4087593 - 4086607 - | LacI-family regulatory protein TERM 4308 4087629 - 4087645 + r 72 -6.5 -4.36914 | opp_overlap 4087629 AAGGAATTTACTATA GCATGAG CCA CTCAGGC TTTTGTAGCGCCACA YPTB3445 4091055 - 4087702 - | hypothetical protein YPTB3446 4092241 - 4091138 - | ABC sugar transporter, ATP-binding subunit TERM 4309 4092133 - 4092109 - G 76 -11.5 -2.79023 | opp_overlap 4092113, overlap 4092106 CAAGGCCAGCAATCA TGCGCAACATC GTT GATTTTGCGCA GCCAGAGGGGCCAAC TERM 4310 4092206 - 4092190 - G 72 -10.9 -2.60283 | opp_overlap 4092188 4092187, overlap 4092189 4092187 4092192 TATCCAAATTAATAT CATGCAG AAC CTGCATG CCGTTTGGATATATT TERM 4311 4093217 - 4093205 - g 80 -4.1 -5.24129 | TTGGTCGACAAAAAA CAATG CGT CACTG GGCTACTTCGTTGAT YPTB3447 4092579 - 4093958 + | hypothetical protein YPTB3448 4094060 - 4095055 + | putative exported protein. yapF 4095115 - 4097400 + | putative autotransporter protein TERM 4312 4097463 - 4097505 + T 81 -7.1 -4.60797 | gap 2, opp_overlap 4097435, overlap 4097452 4097465 4097466 CTTAGGCCGCTGACG GCA--TTCCTACCGCTGTACT CCG AGTGCAGCGGCGGGAGCTTGC TTTTGTATCTGCCAA TERM 4313 4097465 - 4097501 + T 84 -10.1 -3.80768 | overlap 4097463 4097466 TAGGCCGCTGACGGC ATTCCTACCGCTGTACT CCG AGTGCAGCGGCGGGAGC TTGCTTTTGTATCTG TERM 4314 4097466 - 4097500 + T 93 -13.6 -2.87377 | overlap 4097465 4097463 AGGCCGCTGACGGCA TTCCTACCGCTGTACT CCG AGTGCAGCGGCGGGAG CTTGCTTTTGTATCT YPTB3451 4098386 - 4098135 - | hypothetical protein YPTB3452 4098705 - 4098388 - | hypothetical protein TERM 4315 4098984 - 4098967 - R 100 -10.5 -5.22312 | opp_overlap 4098966 4098967 ACTTAGAGCAAAAAA CCCAGCC AGTT GGCCGGG ATTCATCATCGAACT YPTB3453 4099343 - 4098990 - | hypothetical protein TERM 4316 4100217 - 4100199 - R 76 -9.5 -3.55444 | opp_overlap 4100205 CTGTCACCTGTCAAA CCACCGG CCAGC CCGGCGG CTAATGTACTCAGTG TERM 4317 4100710 - 4100727 + r 70 -7.7 -3.67611 | CCTTCATCTTGTCGT TTGCCGC GTGA GTGGCAA TTATCTTGCCCTGCG YPTB3455 4101894 - 4101394 - | hypothetical protein TERM 4318 4101696 - 4101670 - G 100 -15.4 -3.53811 | opp_overlap 4101652 4101676, overlap 4101676 TTTACCTTTTTCAAA GTCAAAGAATGT TTC ACATTCTTTGAC TGTCAATGTACGACT TERM 4319 4102864 - 4102846 - R 76 -9.5 -3.55444 | opp_overlap 4102852 CTGTCACCTGTCAAA CCACCGG CCAGC CCGGCGG CTAATGTACTCAGTG TERM 4320 4103283 - 4103294 + r 70 -7.2 -3.89903 | overlap 4103290 TGCCGTGGCCGCCTT GCCC GGAT GGGC TTTCTCCCACTGTTT TERM 4321 4103357 - 4103374 + r 70 -7.7 -3.67611 | CCTTCATCTTGTCGT TTGCCGC GTGA GTGGCAA TTATCTTGCCCTGCG TERM 4322 4104238 - 4104262 + r 77 -3.5 -5.1615 | gap 1, overlap 4104231 4104241 ACGCCAACGCTACCG CC-ACGGCTG CTGTTA CTGCCGTCGG TTTTTTGCCTATTGG TERM 4323 4104314 - 4104332 + r 75 -8.8 -3.61178 | opp_overlap 4104314 CACGCGCCGCATCAA GCCGGG TATCGCC CCCGGC TTTAAGCTGGCTGCC TERM 4324 4104638 - 4104652 + r 71 -9.2 -3.02144 | CGCGGGCCGCTTTGG CGGTGG TGA CCGCCG TATTGACGGCACTGC TERM 4325 4105198 - 4105226 + r 70 -3.8 -4.75174 | overlap 4105199 4105201 GAGACCAGCCCTTTG GCAGATCCCAGT GTAGA GCTGGGATCTCA TTTTTAGATTAGGTC TERM 4326 4105201 - 4105223 + r 76 -9.9 -3.28592 | overlap 4105199 4105198 ACCAGCCCTTTGGCA GATCCCAGT GTAGA GCTGGGATC TCATTTTTAGATTAG TERM 4327 4107093 - 4107104 + r 70 -7.2 -3.89903 | overlap 4107100 TGCCGTGGCCGCCTT GCCC GGAT GGGC TTTCTCCCACTGTTT TERM 4328 4107167 - 4107184 + r 70 -7.7 -3.67611 | CCTTCATCTTGTCGT TTGCCGC GTGA GTGGCAA TTATCTTGCCCTGCG TERM 4329 4108048 - 4108072 + r 77 -3.5 -5.1615 | gap 1, overlap 4108041 4108051 ACGCCAACGCTACCG CC-ACGGCTG CTGTTA CTGCCGTCGG TTTTTTGCCTATTGG TERM 4330 4108182 - 4108204 + r 74 -9.2 -3.28146 | AATATCGCTACCGGT GATCCCAG AGTGAAG CTGGGATC TTAATACTAGTTTTT YPTB3458 4108776 - 4108387 - | hypothetical protein TERM 4331 4109726 - 4109695 - R 100 -13.1 -4.70659 | opp_overlap 4109701 4109721, overlap 4109696 4109701 TCTGACAGTTAAAAA GCAAAATCCCGGC TCAGTG GCCGGGATTTTGA TAAAAATTTAAGGTA TERM 4332 4109725 - 4109696 - R 100 -16.6 -3.41913 | opp_overlap 4109701 4109721, overlap 4109695 4109701 CTGACAGTTAAAAAG CAAAATCCCGGC TCAGTG GCCGGGATTTTG ATAAAAATTTAAGGT TERM 4333 4109720 - 4109701 - R 100 -10.7 -4.78661 | opp_overlap 4109701, overlap 4109696 4109695 AGTTAAAAAGCAAAA TCCCGGC TCAGTG GCCGGGA TTTTGATAAAAATTT TERM 4334 4109701 - 4109720 + r 100 -11.4 -4.27192 | opp_overlap 4109701 4109696 4109695 AGTTAAAAAGCAAAA TCCCGGCT CAGT GGCCGGGA TTTTGATAAAAATTT YPTB3460 4120078 - 4109942 - | adhesin/hemolysin TERM 4335 4110900 - 4110882 - G 74 -9.5 -3.55444 | opp_overlap 4110888 CTGTCACCTGTCAAA CCACCGG CCAGC CCGGCGG CTAATGTACTCAGTG TERM 4336 4112274 - 4112298 + g 75 -3.5 -5.1615 | gap 1, overlap 4112267 4112277 ACGCCAACGCTACCG CC-ACGGCTG CTGTTA CTGCCGTCGG TTTTTTGCCTATTGG TERM 4337 4113213 - 4113229 + g 90 -7.9 -5.14965 | overlap 4113180 4113215 TCGCTGCGGGCGGTG GTGCTGG AGA CCAGCCC TTTTTTAGTCCCGGT TERM 4338 4114787 - 4114817 + g 81 -9.6 -4.07133 | opp_overlap 4114799 GCTGTCGCGATCACG TGGGGCGACAATCG CAC CGGGTGCTGCCCCA TTGTTTATCACCGTA TERM 4339 4115243 - 4115258 + g 80 -8.2 -4.4009 | TTGAGTATAACGCCC CCCCGG AATA TCGGGG TTTTCTGCCGTCCAG TERM 4340 4115543 - 4115558 + g 70 -2.4 -4.91712 | overlap 4115536 4115545 AATTACCGGTGCCAA CAGCGC TAGT GTGCCG TTTTTATCCGTTGCA TERM 4341 4118806 - 4118833 + g 76 -9 -3.83205 | overlap 4118807 TGCCGCTAATATTTT TCCCTTGGGCGG TTAG CTGCCCACGGGC TTTAATATCAAGGGT TERM 4342 4118807 - 4118832 + g 80 -12.5 -2.89602 | overlap 4118806 GCCGCTAATATTTTT CCCTTGGGCGG TTAG CTGCCCACGGG CTTTAATATCAAGGG YPTB3461 4121811 - 4120123 - | putative hemolysin activator/exporter TERM 4343 4121116 - 4121135 + g 100 -9.2 -4.74706 | ACCCGAATCATCCAG TGAGGCGG CCAG CCGCCACA TTTTTCGCTGTTGCC TERM 4344 4121374 - 4121386 + g 74 -9.1 -3.69323 | overlap 4121370 CACGACGTTTAGCGC CAGCG TGC CGCTG TTTAAATCCTGCTGC TERM 4345 4121633 - 4121623 - G 73 -2.4 -5.04987 | overlap 4121612 4121624 AATACGGCTAAAAAA GGCC GAG GGCG CAGATAAGCGCACAT terY 4122526 - 4123164 + | putative tellurium resistance protein terX 4123197 - 4123838 + | putative tellurium resistance protein YPTB3464 4123777 - 4124478 + | putative TerY-like tellurite resistance protein. TERM 4346 4124482 - 4124516 + F 100 -8.6 -5.626 | opp_overlap 4124485, overlap 4124485 TTGGTACTGTAATTT AAAGGCAAAGCCCC CATTCAC GGCGCTTTGCCTTA TTTTTTTGTCGCATC TERM 4347 4124513 - 4124485 - f 86 -10.3 -3.76125 | opp_overlap 4124482 4124485 GTACTGTAATTTAAA GGCAAAGCCCC CATTCAC GGCGCTTTGCC TTATTTTTTTGTCGC TERM 4348 4124485 - 4124513 + F 100 -10.3 -4.89054 | opp_overlap 4124485, overlap 4124482 GTACTGTAATTTAAA GGCAAAGCCCC CATTCAC GGCGCTTTGCC TTATTTTTTTGTCGC YPTB3465 4124580 - 4125620 + | hypothetical protein YPTB3466 4125620 - 4127368 + | hypothetical protein TERM 4349 4127444 - 4127430 - g 74 -6.4 -4.4648 | ACCTGTACGACAAAA GATGGC GAA ACCATC CAGTACGTTGACGAG YPTB3467 4127400 - 4128899 + | putative kinase protein YPTB3468 4129290 - 4129859 + | acid-resistance membrane protein TERM 4350 4130030 - 4129989 - f 82 -3 -5.4756 | gap 2 AATTTGAATAAAAAA TCTCATCCGACCACTTGCTG GATT CAGTAAG-GG-CGGCGGAGA TATAACAATAATGGT fadH 4130072 - 4132093 + | 2,4-dienoyl-CoA reductase TERM 4351 4132200 - 4132169 - T 100 -15.2 -3.85879 | overlap 4132159 TAGAACTGAGAATAA TCACAGGGTGTGGC GAAA ACCCCACCCTGTGA AATACCGATTAGAAA YPTB3470 4133396 - 4132209 - | putative methyltransferase TERM 4352 4133501 - 4133483 - H 100 -14.6 -3.54459 | opp_overlap 4133472 4133471 TTAATGCGTTTTAAA CGCGCTTG TGC CAAGCGCG AACCCACACCGCAAG TERM 4353 4134152 - 4134162 + G 71 -4 -4.74103 | opp_overlap 4134140 GCATACGGCCGTTAA TACT GGC AGTA TTTTTACGTTAAAAG TERM 4354 4134397 - 4134379 - g 74 -3.8 -4.8543 | opp_overlap 4134379 GAAGTGCCACAAAAA CCACTGTC GGT GATAATGG TATTCTCTATGTTTC YapG 4133871 - 4136864 + | pertactin family virulence factor/autotransporter TERM 4355 4136908 - 4136880 - f 73 -5.9 -4.431 | opp_overlap 4136885, overlap 4136883 TATCCATTGATAAAA CGATACCTGTGCC TAT GGTGCAGGTATTG ACAGACCGCTAATCC YPTB3472 4137120 - 4137629 + | hypothetical protein YPTB3473 4137847 - 4138842 + | MocA family oxidoreductase TERM 4356 4138962 - 4138983 + F 70 -3.7 -4.85653 | gap 1, opp_overlap 4138951, overlap 4138962 4138963 ACTACAATCTATCGA T-CGGGGCTA CCA TAGCCCCACA TTTATTTTGTATATA TERM 4357 4139198 - 4139173 - f 76 -6.9 -4.44667 | gap 1 GGTGTGAACAATAAA CGCTCA-GCC TCGTTCC GGCTTGAGCG CTATACCCAAAGTCA TERM 4358 4140286 - 4140272 - g 70 -10 -3.17051 | overlap 4140270 GTGCCACCATTAATA TGGCTG GTG CAGCCA TCACCATCACGGTGC YPTB3474 4139377 - 4140633 + | serine/threonine transporter SstT TERM 4359 4140658 - 4140683 + T 100 -9.8 -5.88565 | opp_overlap 4140658 TTTACCTACGCAAAA TGCCAGTCAG TTAAGT TTGACTGGCA TTTTTTTGTTATCAA TERM 4360 4140683 - 4140658 - T 83 -9.1 -4.19817 | opp_overlap 4140658 TTTACCTACGCAAAA TGCCAGTCA GTTAAGTT TGACTGGCA TTTTTTTGTTATCAA YPTB3475 4141230 - 4140700 - | hypothetical protein TERM 4361 4141333 - 4141292 - R 75 -8.7 -3.63559 | gap 1, opp_overlap 4141293, overlap 4141290 4141293 ATTAATAAGCAAACA GCGCACTCCCCCTACA-GCT TAA AGTGTGAAGGGGAAGTGCGT TTCCATAAAAAACAG TERM 4362 4141293 - 4141332 + r 93 -12.2 -3.64703 | gap 1, opp_overlap 4141292 4141290 4141293 TTAATAAGCAAACAG CGCACTCCCCCTACA-GCT TAA AGTGTGAAGGGGAAGTGCG TTTCCATAAAAAACA TERM 4363 4141332 - 4141293 - R 83 -12.2 -2.77051 | gap 1, opp_overlap 4141293, overlap 4141292 4141290 TTAATAAGCAAACAG CGCACTCCCCCTACA-GCT TAA AGTGTGAAGGGGAAGTGCG TTTCCATAAAAAACA TERM 4364 4141349 - 4141378 + r 82 -5.7 -5.03145 | opp_overlap 4141348 4141351, overlap 4141351 TTCCATAAAAAACAG AACGCCGTTTCAT ATTA ACGAAATGGCGTA TTTTTTACAAGGTTA TERM 4365 4141351 - 4141376 + r 79 -8.3 -4.13963 | opp_overlap 4141348 4141351, overlap 4141349 CCATAAAAAACAGAA CGCCGTTTCAT ATTA ACGAAATGGCG TATTTTTTACAAGGT TERM 4366 4141376 - 4141351 - R 79 -8.3 -4.23386 | opp_overlap 4141351 4141349, overlap 4141348 CCATAAAAAACAGAA CGCCGTTTCAT ATTA ACGAAATGGCG TATTTTTTACAAGGT uxaA 4142873 - 4141383 - | altronate hydrolase uxaB 4144335 - 4142884 - | altronate oxidoreductase TERM 4367 4143348 - 4143377 + g 71 -2.9 -5.00616 | gap 1 CGTCTTCGGGCAGCT CCAATACCGGAACA ATC TCTTCCG-TAATGG TTTTTTCCACAAAGC uxaC 4145943 - 4144534 - | glucuronate isomerase exuT 4146689 - 4147993 + | major facilitator transporter TERM 4368 4148077 - 4148044 - f 79 -11.1 -3.2115 | opp_overlap 4148046 4148051, overlap 4148046 4148051 TAAATGACCTACTAA CATGAAAGCCCGGTA AATT TATCGGGCTTTCATC TCTCCTGTTATCCGC TERM 4369 4148046 - 4148075 + F 100 -15.9 -3.02381 | opp_overlap 4148046 4148044 4148051, overlap 4148051 AATGACCTACTAACA TGAAAGCCCGGTA AATT TATCGGGCTTTCA TCTCTCCTGTTATCC TERM 4370 4148075 - 4148046 - f 100 -13.7 -3.16264 | opp_overlap 4148046 4148051, overlap 4148044 4148051 AATGACCTACTAACA TGAAAGCCCGGTA AATT TATCGGGCTTTCA TCTCTCCTGTTATCC TERM 4371 4148051 - 4148070 + F 84 -10 -3.90358 | opp_overlap 4148046 4148044 4148051, overlap 4148046 CCTACTAACATGAAA GCCCGGTA AATT TATCGGGC TTTCATCTCTCCTGT TERM 4372 4148070 - 4148051 - f 74 -7.8 -3.95022 | opp_overlap 4148051 4148046, overlap 4148046 4148044 CCTACTAACATGAAA GCCCGGTA AATT TATCGGGC TTTCATCTCTCCTGT exuR 4148256 - 4149050 + | DNA-binding transcriptional repressor ExuR YPTB3481 4149251 - 4149832 + | putative lipoprotein yqjA 4150110 - 4150808 + | DedA family membrane protein YPTB3483 4150805 - 4151194 + | hypothetical protein TERM 4373 4151226 - 4151199 - f 91 -12 -3.4759 | overlap 4151200 ACTTAGGATAATCAA CGCTACGGGGAG TCGA CTCCCCGTATCA AACTCGTTCCTCTCA TERM 4374 4151225 - 4151200 - f 93 -13.3 -2.68072 | overlap 4151199 CTTAGGATAATCAAC GCTACGGGGAG TCGA CTCCCCGTATC AAACTCGTTCCTCTC YPTB3484 4151420 - 4151800 + | hypothetical protein YPTB3485 4151955 - 4152260 + | putative membrane associated protein YPTB3486 4152263 - 4152658 + | hypothetical protein TERM 4375 4152740 - 4152685 - g 77 -6.3 -4.63527 | opp_overlap 4152685, overlap 4152688 CTAGCATTGGAAAAA GAAGCATTACTGCGTGAGATCCAG-CA ACAA CGTCTGGATCTCGCGGA-CAATGCTGC TCGTTGGGTTGAAGT TERM 4376 4152737 - 4152688 - g 74 -6.6 -4.42748 | opp_overlap 4152685, overlap 4152685 GCATTGGAAAAAGAA GCATTACTGCGTGAGATCCAG-CA ACAA CGTCTGGATCTCGCGGA-CAATGC TGCTCGTTGGGTTGA YPTB3487 4152655 - 4152939 + | hypothetical protein YPTB3488 4153243 - 4153638 + | putative membrane protein. TERM 4377 4153682 - 4153704 + F 100 -8.5 -5.40072 | opp_overlap 4153673 AGTTAATATCAGCGA TACCCTATC CATCC GGTAGGGTA TTTTTTTAAGGGGGA yqjG 4153724 - 4154710 + | glutathione S-transferase TERM 4378 4154781 - 4154756 - T 75 -8.9 -3.6284 | AATTAGCACGCTAAA CGCCCTTTTCC CCAA GGCCAAGGGCG TAGCAAGCGAACGTT YPTB3490 4155734 - 4154841 - | LysR family transcriptional regulator YPTB3491 4155996 - 4156700 + | hypothetical protein TERM 4379 4156780 - 4156755 - T 83 -11.9 -2.73124 | opp_overlap 4156760 4156761, overlap 4156761 CCCTATCCTGCAAAG CAAAAACCCGC CAAA GCGGGATTTTG TGGCATGAGTGGCGT TERM 4380 4156760 - 4156775 + T 70 -6 -4.40358 | opp_overlap 4156755 4156761, overlap 4156761 TCCTGCAAAGCAAAA ACCCGC CAAA GCGGGA TTTTGTGGCATGAGT TERM 4381 4156774 - 4156761 - T 100 -9.5 -4.98531 | opp_overlap 4156760 4156761, overlap 4156755 CCTGCAAAGCAAAAA CCCGC CAAA GCGGG ATTTTGTGGCATGAG TERM 4382 4156761 - 4156774 + T 72 -9.5 -3.23733 | opp_overlap 4156761 4156755, overlap 4156760 CCTGCAAAGCAAAAA CCCGC CAAA GCGGG ATTTTGTGGCATGAG TERM 4383 4156893 - 4156868 - T 83 -11.9 -2.73124 | opp_overlap 4156873 4156874, overlap 4156874 CCCTATCCTCCAAAG CAAAAACCCGC CGAA GCGGGATTTTG TGGCATGAGTGGCGT TERM 4384 4156873 - 4156888 + T 70 -6 -4.40358 | opp_overlap 4156868 4156874, overlap 4156874 TCCTCCAAAGCAAAA ACCCGC CGAA GCGGGA TTTTGTGGCATGAGT TERM 4385 4156887 - 4156874 - T 100 -9.5 -4.98531 | opp_overlap 4156873 4156874, overlap 4156868 CCTCCAAAGCAAAAA CCCGC CGAA GCGGG ATTTTGTGGCATGAG TERM 4386 4156874 - 4156887 + T 72 -9.5 -3.23733 | opp_overlap 4156874 4156868, overlap 4156873 CCTCCAAAGCAAAAA CCCGC CGAA GCGGG ATTTTGTGGCATGAG TERM 4387 4157006 - 4156981 - T 83 -11.9 -2.73124 | opp_overlap 4156986 4156987, overlap 4156987 CCTTATCCTGCAAAG CAAAAACCCGC CGAA GCGGGATTTTG TGGAATGAGTGGAGC TERM 4388 4156986 - 4157001 + T 70 -6 -4.40358 | opp_overlap 4156981 4156987, overlap 4156987 TCCTGCAAAGCAAAA ACCCGC CGAA GCGGGA TTTTGTGGAATGAGT TERM 4389 4157000 - 4156987 - T 100 -9.5 -4.98531 | opp_overlap 4156986 4156987, overlap 4156981 CCTGCAAAGCAAAAA CCCGC CGAA GCGGG ATTTTGTGGAATGAG TERM 4390 4156987 - 4157000 + T 72 -9.5 -3.23733 | opp_overlap 4156987 4156981, overlap 4156986 CCTGCAAAGCAAAAA CCCGC CGAA GCGGG ATTTTGTGGAATGAG TERM 4391 4157119 - 4157094 - T 83 -11.9 -2.73124 | opp_overlap 4157099 4157100, overlap 4157100 CCCTATCGTGCAAAG CAAAAACCCGC CGAA GCGGGATTTTG TGGAATGAGTGGAGT TERM 4392 4157099 - 4157114 + T 70 -6 -4.40358 | opp_overlap 4157094 4157100, overlap 4157100 TCGTGCAAAGCAAAA ACCCGC CGAA GCGGGA TTTTGTGGAATGAGT TERM 4393 4157113 - 4157100 - T 100 -9.5 -4.98531 | opp_overlap 4157099 4157100, overlap 4157094 CGTGCAAAGCAAAAA CCCGC CGAA GCGGG ATTTTGTGGAATGAG TERM 4394 4157100 - 4157113 + T 72 -9.5 -3.23733 | opp_overlap 4157100 4157094, overlap 4157099 CGTGCAAAGCAAAAA CCCGC CGAA GCGGG ATTTTGTGGAATGAG YPTB3492 4158423 - 4157524 - | tetrapyrrole methylase family protein TERM 4395 4157619 - 4157636 + g 77 -10.5 -3.60762 | overlap 4157621 TGACTCCATGAATTT CTGCCGC TAAT GCGGCGG CTTTTTTCAGCGGTA TERM 4396 4157621 - 4157637 + g 88 -7.2 -5.02074 | overlap 4157619 ACTCCATGAATTTCT GCCGCT AATGC GGCGGC TTTTTTCAGCGGTAA TERM 4397 4158488 - 4158470 - H 80 -2.5 -5.42259 | gap 1, opp_overlap 4158470, overlap 4158473 GCATCTTGAAAAAAA CATCACTG GATA CAGT-ATG CTTTCCTCAACATTC TERM 4398 4158839 - 4158829 - g 76 -8.2 -4.03995 | opp_overlap 4158831 4158832, overlap 4158830 TCGCGCAGAAAAATA CGCC AGC GGCG GCTGATATTCTTGCC YPTB3493 4158486 - 4160459 + | hypothetical protein TERM 4399 4160615 - 4160627 + G 71 -4.8 -4.56597 | opp_overlap 4160593, overlap 4160593 4160591 CGTCGCCATCTGGAG CGAG CAGGT CTCG TTTTTCAAGCGGCCA TERM 4400 4160638 - 4160672 + G 79 -10 -3.82824 | TCTCGTTTTTCAAGC GGCCAATGTTGCCTTC CGT GGAGGCGAAATTGACC TTATTATGCGTGATG TERM 4401 4160786 - 4160823 + G 73 -7.9 -4.07885 | gap 3, opp_overlap 4160777 4160774 4160778, overlap 4160774 CAACAACGGCTACAT CTGGCCGCCGCTGTT-TG GCTGG CACAAC-GCGGC-GCCAG TTTTGCCACAACATC YPTB3494 4160558 - 4160911 + | hypothetical protein TERM 4402 4161000 - 4160986 - f 77 -5 -5.00642 | opp_overlap 4160986 CAAGCGAGAGAAAAA TTGGTC TGG AACCAA TTTGAACAGCATTTA YPTB3495 4161182 - 4161772 + | DnaA initiator-associating protein DiaA TERM 4403 4161925 - 4161883 - g 85 -7.6 -4.82901 | CGGTTGCCACAAAAA CCGCCACGGATCCACGTACC ATC GGTACGCAGGTAGATGACGG CACACTGGAAGCCAG YPTB3496 4161783 - 4162358 + | hypothetical protein TERM 4404 4162431 - 4162386 - T 71 -6.8 -4.11363 | opp_overlap 4162395, overlap 4162379 AAGAAGATTAAATAA GATTTATCACGGGCTTAGCG CTAAAC CGCCAAGCCCGTTTTTTATC CACCACATCGATACC TERM 4405 4162395 - 4162422 + T 100 -12.7 -5.24129 | opp_overlap 4162386 AAATAAGATTTATCA CGGGCTTAGCG CTAAAC CGCCAAGCCCG TTTTTTATCCACCAC mtgA 4163290 - 4162565 - | monofunctional biosynthetic peptidoglycan transglycosylase elbB 4163940 - 4163287 - | isoprenoid biosynthesis protein YPTB3499 4164164 - 4163970 - | hypothetical protein TERM 4406 4164161 - 4164184 + g 95 -4.4 -5.81032 | overlap 4164164 TGACGCAGTCTTCGC GCACCCCGGC CTCG GTCGGGGTTA TTTTTTTTCAACTTC TERM 4407 4164164 - 4164181 + g 100 -10.5 -4.96028 | overlap 4164161 CGCAGTCTTCGCGCA CCCCGGC CTCG GTCGGGG TTATTTTTTTTCAAC arcB 4166518 - 4164182 - | aerobic respiration control sensor protein ArcB YPTB3501 4167725 - 4166802 - | hypothetical protein TERM 4408 4167109 - 4167119 + g 77 -6.8 -4.60924 | opp_overlap 4167104 ATCCCATCAACACCG GTGG TGA CCAC TTTTTCCAAGGTTTC TERM 4409 4169294 - 4169272 - g 73 -9.8 -3.33419 | overlap 4169258 4169270 4169266 ACGGCGAAATCAACA CCATCGCCGG TAA CCGCCAATGG GCCAAGGCGCGTGCC gltB 4168548 - 4173005 + | glutamate synthase subunit alpha TERM 4410 4173167 - 4173132 - g 79 -9.6 -3.89695 | opp_overlap 4173143 4173145 TTCTCAGAAACACAA GCCAAAGCACAGGCCG ATCG CTGCCTGTCCTGCGGC AATCCGTACTGTGAA TERM 4411 4173473 - 4173494 + G 95 -15.1 -2.8632 | overlap 4173466 4173464 TGTGGCCGTGATCGG GGCCGGCCC TGCC GGGCTGGCC TGTGCTGATGTATTA gltD 4173015 - 4174433 + | glutamate synthase subunit beta TERM 4412 4174499 - 4174463 - f 83 -8.8 -4.23647 | gap 1, opp_overlap 4174468, overlap 4174468 AAATCATTCAATAAA CACTAGGGCGGGTTC AATTCACA GAACCCGCCCTT-TG AGGTTATTGACAAAG TERM 4413 4174468 - 4174495 + F 100 -14.2 -3.72051 | opp_overlap 4174463 4174468 ATTCAATAAACACTA GGGCGGGTTC AATTCACA GAACCCGCCC TTTGAGGTTATTGAC TERM 4414 4174495 - 4174468 - f 100 -14.2 -2.94962 | opp_overlap 4174468, overlap 4174463 ATTCAATAAACACTA GGGCGGGTTC AATTCACA GAACCCGCCC TTTGAGGTTATTGAC TERM 4415 4174576 - 4174602 + F 72 -7.2 -3.9749 | gap 1, overlap 4174575 CTTCCCTGGGGGCTC GAG-CCGCGCC CTCCCT GGCGCGGACGC TTTACTCTTCTGCCT YPTB3504 4175033 - 4175518 + | hypothetical protein TERM 4416 4175637 - 4175609 - T 70 -5.2 -4.51238 | gap 1, overlap 4175615 CGCACAAAACAGAAA CGATAAGGGCGGC TAAC GCCGCCCTGAA-G AGATAGAGCCTGTAT TERM 4417 4175632 - 4175615 - T 100 -14.1 -3.69613 | overlap 4175609 AAACAGAAACGATAA GGGCGGC TAAC GCCGCCC TGAAGAGATAGAGCC TERM 4418 4175690 - 4175725 + T 76 -9.6 -3.41602 | gap 1, opp_overlap 4175679 TTAACCACGCGTAAT GCCG-GGCGGCCACCAC TCC GTGGCGGTTGCGGCGGC TTATCATCCGGTGAA sspB 4176186 - 4175671 - | ClpXP protease specificity-enhancing factor sspA 4176833 - 4176192 - | stringent starvation protein A TERM 4419 4177154 - 4177170 + r 100 -13.7 -4.62783 | opp_overlap 4177154 TCAGGCATAAAAAAA CCCGGTG AGA CACCGGG TTTTTACCATCAATC TERM 4420 4177170 - 4177154 - R 100 -13.7 -5.64274 | opp_overlap 4177154 TCAGGCATAAAAAAA CCCGGTG AGA CACCGGG TTTTTACCATCAATC rpsI 4177599 - 4177207 - | 30S ribosomal protein S9 rplM 4178042 - 4177614 - | 50S ribosomal protein L13 TERM 4421 4177842 - 4177859 + g 78 -5.5 -4.91712 | CTTGTCTGTACGCTT GTTGCCG GTTA CAGCAAC TTTTTCTGCGTTCAG TERM 4422 4178166 - 4178190 + r 71 -8.8 -3.33162 | opp_overlap 4178170, overlap 4178170 CAATGCTGGCACTAT CAAAGTTTTT GGGAA AAAAACTTTG TTGTAACGTGGGGTC TERM 4423 4178301 - 4178282 - R 81 -11.4 -2.76249 | TAAACATGTTAAGTA CGGACGAC AAAT GTCGCCCG CCATAGAATAGCATT YPTB3509 4179483 - 4178356 - | hypothetical protein TERM 4424 4179682 - 4179671 - H 71 -4.4 -4.7629 | TTATTAAGTGAAAAA GTTC TGCT GAAC AATGAAGTCAAAAAA YPTB3510 4179707 - 4180111 + | cytochrome d ubiquinol oxidase subunit III TERM 4425 4181102 - 4181074 - g 73 -9.7 -3.35992 | gap 1, opp_overlap 4181076 ACTGATCGGAATTAA TACCGCCATCCT TGCGCC AGG-TGGCGGTA ATATCGGTATCGGCT degQ 4180382 - 4181755 + | protease TERM 4426 4181794 - 4181768 - f 100 -15.2 -4.8543 | opp_overlap 4181759, overlap 4181769 TAATTTGCAGAAAAA TCGGACACAGCA CGA TGCTGTGTCCGC CTAACTCATGCTATT TERM 4427 4181793 - 4181769 - f 100 -18.7 -3.50535 | opp_overlap 4181759, overlap 4181768 AATTTGCAGAAAAAT CGGACACAGCA CGA TGCTGTGTCCG CCTAACTCATGCTAT degS 4181845 - 4182933 + | serine endoprotease TERM 4428 4183054 - 4183030 - T 100 -8.6 -5.59879 | opp_overlap 4183030 TATAAACATAAAAAA TGCCAGCC CCAATCACC GGCTGGCA TTTTTATTTACCGAA TERM 4429 4183030 - 4183054 + T 100 -8.6 -5.27335 | opp_overlap 4183030 TATAAACATAAAAAA TGCCAGCC CCAATCACC GGCTGGCA TTTTTATTTACCGAA murA 4184376 - 4183114 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase YPTB3514 4184793 - 4184530 - | putative BolA/YrbA family protein TERM 4430 4184892 - 4184864 - R 84 -6.1 -5.04868 | gap 1, opp_overlap 4184864 TGAAACTAAAGAAAA GCCCCTGTG-AT GCCATT ATGCACAGGAGC TTGATTATCTTACCT YPTB3515 4185233 - 4184931 - | putative anti-sigma B factor antagonist TERM 4431 4185139 - 4185163 + g 86 -12.2 -3.5764 | opp_overlap 4185152 GCCAGCAAGGTTTCA CGCTGTTGCC AAAGC GGTAACAGCG TTTCACGATCCAGTT yrbC 4185892 - 4185269 - | hypothetical protein yrbD 4186462 - 4185905 - | hypothetical protein yrbE 4187249 - 4186467 - | ABC transporter, permease subunit, toluene tolerance protein yrbF 4188285 - 4187467 - | putative ABC transporter ATP-binding protein YrbF TERM 4432 4188952 - 4188962 + G 70 -2.4 -4.9645 | overlap 4188950 GTCATCTTGCTCTTG GCTG CTG CCGC TTTTATTGTTCTGAT yrbG 4188550 - 4189524 + | putative calcium/sodium:proton antiporter YPTB3521 4189635 - 4190621 + | D-arabinose 5-phosphate isomerase YPTB3522 4191027 - 4191590 + | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase yrbK 4191587 - 4192150 + | hypothetical protein YPTB3524 4192134 - 4192679 + | hypothetical protein yhbG 4192686 - 4193411 + | putative ABC transporter ATP-binding protein YhbG TERM 4433 4194648 - 4194658 + G 77 -6.8 -4.62336 | opp_overlap 4194614 4194607 GAAATTCTTGCACAG TCCC CGA GGGA TTTTTGAACTGAAGT rpoN 4193473 - 4194906 + | RNA polymerase factor sigma-54 TERM 4434 4195086 - 4195075 - g 74 -4.4 -4.88646 | AAAAAGTAAAACAAA TTGC AGAA GCAA CGGTACATGTGAATG yhbH 4194930 - 4195217 + | putative sigma(54) modulation protein TERM 4435 4195307 - 4195268 - f 100 -21.6 -2.88249 | opp_overlap 4195276, overlap 4195276 TACACTCGCTACATA GCCAGATACCGGTGGATA TTTA TTCCCACCGGTATCTGGC GTAAAACAGCGCTTA ptsN 4195336 - 4195818 + | sugar-specific enzyme IIA component of PTS TERM 4436 4196045 - 4196027 - f 74 -10.3 -2.60496 | opp_overlap 4196044 4196044, overlap 4196026 4196024 TGCGGCTCGAAAGAG GGTGGGT TCCGC ACCCACC ACACTCCGGTTTGTA YPTB3529 4196124 - 4196978 + | hypothetical protein ptsO 4196975 - 4197247 + | phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr) TERM 4437 4197472 - 4197488 + F 100 -13.7 -6.06529 | AACCGATCCTGTAAG GCCCCTC GTT GAGGGGC TTTTTTTTGTCTGTC pyrB 4197585 - 4198520 + | aspartate carbamoyltransferase catalytic subunit pyrI 4198529 - 4198996 + | aspartate carbamoyltransferase regulatory subunit YPTB3533 4199134 - 4199520 + | hypothetical protein TERM 4438 4199532 - 4199571 + F 100 -26 -5.06016 | opp_overlap 4199540 4199542 TTAATCCCTCCCCCA TCACCACATACGGCTGGT TATC GCCAGCCGTATGTGGTGA TTTTATTTCTCTCCT TERM 4439 4199563 - 4199540 - f 89 -12.5 -2.82516 | opp_overlap 4199532, overlap 4199542 TCCCCCATCACCACA TACGGCTGG TTATCG CCAGCCGTA TGTGGTGATTTTATT TERM 4440 4199561 - 4199542 - f 79 -10.7 -2.96216 | opp_overlap 4199532, overlap 4199540 CCCCATCACCACATA CGGCTGG TTATCG CCAGCCG TATGTGGTGATTTTA TERM 4441 4199906 - 4199896 - g 80 -6.8 -4.74706 | overlap 4199888 CGCAATAGCCAAAAA TGGC GTC GCCA TCCCATTACCTGATA YPTB3534 4199819 - 4200295 + | hypothetical protein TERM 4442 4200398 - 4200368 - f 88 -7 -5.15634 | opp_overlap 4200368 CACCGCAGTAAAAAA TACCCTAACG GTGAGAAAATT CGTTAGGGTA TTCCTATGCTGCCAG TERM 4443 4200892 - 4200877 - g 74 -9 -3.63073 | opp_overlap 4200874 4200870 CATATTCTGCAACAA CGCCAT GTTG ATGGCG TGATCCTGTTCGGTT treR 4200529 - 4201482 + | trehalose repressor TERM 4444 4201589 - 4201576 - f 79 -6.7 -4.66938 | opp_overlap 4201576, overlap 4201578 ATCTTCAATACAAAA TGGGA ACGT TCCCA TTCCATAAAAATAAA TERM 4445 4202042 - 4202028 - g 76 -7.2 -4.32436 | overlap 4202032 ATAGCATCACCAAAA GAGATT GAA AATCTC TCAATGGTCAAAGGC TERM 4446 4202788 - 4202811 + G 71 -8.8 -3.65143 | overlap 4202786 CGGTGATGACCGGCA GTTTCGCACC GGTC GGTGCGGCAC TATTTGGTTTCCTGT treB 4201893 - 4203308 + | trehalose(maltose)-specific PTS system components IIBC TERM 4447 4203345 - 4203378 + F 75 -5.9 -4.67353 | gap 1, overlap 4203348 4203349 TCGATATAAGTTGTG TTCTCCCGCCAG-CGG TGA TCGTCTGGCGGGGTCA TTTTTCAATGAATAA TERM 4448 4203348 - 4203375 + F 89 -12 -3.26405 | gap 1, overlap 4203345 4203349 ATATAAGTTGTGTTC TCCCGCCAG-CGG TGA TCGTCTGGCGGGG TCATTTTTCAATGAA TERM 4449 4203349 - 4203374 + F 91 -13.3 -2.55361 | gap 1, overlap 4203348 4203345 TATAAGTTGTGTTCT CCCGCCAG-CGG TGA TCGTCTGGCGGG GTCATTTTTCAATGA TERM 4450 4204056 - 4204070 + G 88 -8.5 -4.84359 | overlap 4204058 CCCTAATGATCTGGA CGGCG ATGGC CGCCG TTTTTATACCGATGG treC 4203403 - 4205070 + | trehalose-6-phosphate hydrolase TERM 4451 4205155 - 4205189 + F 73 -10 -3.02829 | AGGGCCGGTGATAGG TGACTCCATCAGTGCA AAA TGTCCTGATGGAGCCG TATTCGCAAAATATA TERM 4452 4205354 - 4205386 + F 100 -14.1 -5.30339 | opp_overlap 4205359 CATTAAGCTATTTTC TAACACCCCCTCTCC TAT GGCGTGGGGGTGTTG TTTTTATGTTTTGCT TERM 4453 4205381 - 4205359 - f 76 -10.4 -3.03243 | opp_overlap 4205354 AGCTATTTTCTAACA CCCCCTCTCC TAT GGCGTGGGGG TGTTGTTTTTATGTT TERM 4454 4205489 - 4205502 + G 74 -9.5 -3.54475 | overlap 4205468 GCGTTGCTAGCGCAA CCGGC TTTT GCCGG TTCTGTGGTCGCAAC rnk 4205423 - 4205833 + | nucleoside diphosphate kinase regulator TERM 4455 4205952 - 4205920 - T 100 -15.7 -3.83921 | opp_overlap 4205914 4205924 GGTAATAGAAGATAA TAGAGGGTAACCGCC GCA GGCCATTACCCTCTA TCGCTCACTTTTATA YPTB3539 4206463 - 4206077 - | putative cytochrome TERM 4456 4206828 - 4206815 - R 74 -6.7 -4.24726 | ACAATAAGGGTAAAA CTGAC CAAC GTCAG AATCTAATATAAACA TERM 4457 4207384 - 4207408 + r 100 -15.8 -3.29511 | opp_overlap 4207374 4207384 AAAAGCGCAGGCAAA CTCGCGGGTA TTTTC TACCCGCGAG TTGTGGAACAGTAAG TERM 4458 4207408 - 4207384 - R 100 -15.8 -3.67989 | opp_overlap 4207384, overlap 4207374 AAAAGCGCAGGCAAA CTCGCGGGTA TTTTC TACCCGCGAG TTGTGGAACAGTAAG pmbA 4208779 - 4207439 - | peptidase PmbA TERM 4459 4208738 - 4208752 + g 73 -10 -3.3344 | TGCAACAGCTTGTTC CAGCGT TTT ACGCTG TTCTGCAACTTGAGT TERM 4460 4209020 - 4209010 - g 83 -2.4 -5.54907 | CCCAGAAAATAAAAA CGAC GAT GACG ATGAGATTATCTGGG TERM 4461 4209125 - 4209112 - g 71 -4.5 -4.57569 | TGATCTGGGTAAAAA TGCAC TCGA GCGCA TCCCATTGGATGAAG TERM 4462 4209197 - 4209182 - g 76 -2.4 -5.30189 | overlap 4209185 CAGAAGATCAAAAAA GAAGGC CGCC GCCGCC AGATCCAGTTGATTG TERM 4463 4209197 - 4209185 - g 73 -4.7 -4.71318 | overlap 4209182 AAGATCAAAAAAGAA GGCCG CCG CCGCC AGATCCAGTTGATTG YPTB3542 4208960 - 4209508 + | hypothetical protein TERM 4464 4209553 - 4209500 - T 100 -14.6 -4.58283 | gap 1, opp_overlap 4209505 GAACTGGCTGAAAAA CAACAGTAATCGGGCGGG-GCCGGG TCACT CCCGGCTCCCGACTCAATACTGTTG GCGGGCATAATCTAT TERM 4465 4209505 - 4209548 + T 71 -9.5 -3.02144 | gap 1, opp_overlap 4209500 GGCTGAAAAACAACA GTAATCGGGCGGG-GCCGGG TCACT CCCGGCTCCCGACTCAATAC TGTTGGCGGGCATAA YPTB3543 4209933 - 4209652 - | putative ribonuclease inhibitor YPTB3544 4210411 - 4209938 - | putative ribonuclease YPTB3545 4212075 - 4210606 - | succinate-semialdehyde dehydrogenase TERM 4466 4211839 - 4211858 + g 81 -7.8 -4.56597 | overlap 4211840 4211844 ACGCTGTAAAATCTC TGCTCGCT GTTT AGCGGGCG TTTTTCGCCAGGCAG TERM 4467 4212203 - 4212181 - R 71 -7 -4.22858 | opp_overlap 4212185, overlap 4212185 AGAAGAGAGAAATAA CAAAGACGCC GTG AGCGCCTTTA TGAGGGCTCGAACCG TERM 4468 4212199 - 4212185 - R 75 -5.6 -4.65458 | opp_overlap 4212185, overlap 4212181 GAGAGAAATAACAAA GACGCC GTG AGCGCC TTTATGAGGGCTCGA yhcP 4214297 - 4212342 - | p-hydroxybenzoic acid efflux subunit AaeB yhcQ 4215234 - 4214299 - | p-hydroxybenzoic acid efflux subunit AaeA YPTB3548 4215445 - 4215242 - | hypothetical protein TERM 4469 4215383 - 4215369 - G 83 -5 -5.22768 | ACAACAAAAAACAAA GCCAAT GAA ATTAGC AGCTCAAGAAATATC YPTB3549 4215748 - 4216659 + | putative DNA-binding transcriptional regulator YPTB3550 4216920 - 4217786 + | LysR family transcriptional regulator TERM 4470 4217843 - 4217815 - f 78 -9.1 -3.84185 | CGTAGTTAAATACAA TTTGTTTAACTAA AAT TTAGTTAAACAGA AGATAACAATAAAAA TERM 4471 4218805 - 4218789 - g 85 -5.9 -5.06816 | ATGGCTTAATAAAAA TGCCATT GAA AATAGCA GCAATAAAAATGATC TERM 4472 4220427 - 4220417 - g 85 -5.4 -5.18355 | CTGAAAAATTAAAAA TCCA TCC TGGA ACCATAATTAAAATA YPTB3551 4218022 - 4220514 + | putative insecticial toxin TERM 4473 4220613 - 4220583 - g 71 -2.7 -4.93877 | gap 1, overlap 4220587 4220591 CTGTATTAAATAAAA TTAACGAATCGCGC CGCG ACGC-ATTGGTTAA CTACTATCTTGCTAA TERM 4474 4221376 - 4221361 - g 80 -4.7 -5.00895 | opp_overlap 4221374 TCGAGTATATAAAAA CCATG AAAATA CATGG GTTGAATCCATTAGT TERM 4475 4223276 - 4223261 - g 71 -4.7 -4.59511 | opp_overlap 4223263 AATATGGCGCAAAAA CAGCT GGATTT AGCTG AGTTAGAGCGAGGCC TERM 4476 4224085 - 4224074 - g 76 -2.2 -5.34309 | ACTAGCAAACAAAAA CTGC TGCT GCAA AGCCTGAGCGACATC YPTB3552 4220555 - 4224133 + | putative insecticidal toxin complex protein TERM 4477 4224174 - 4224155 - f 83 -11.4 -3.06796 | opp_overlap 4224168, overlap 4224157 4224168 CGTTACCTCAGTCAA CAGGCCCC ACAG AGGGCCTG ATAGGAGAGCCCTTT TERM 4478 4225051 - 4225033 - g 75 -6 -4.5442 | CCGGTAATCATAAAA GGAAAATC TTG GAATTTCC GTCAGGACGCCTTCT TERM 4479 4225953 - 4225964 + G 73 -7.2 -4.26344 | CTGCTGGCCCAATCT CGGC CATG GCCG TTTTGGTCACCCTAT TERM 4480 4227673 - 4227663 - g 75 -5.4 -4.83169 | AGGGTGGGATAAAAA TAGC TGT GCTA TCACCCAAATGATAT tcaC 4224190 - 4228659 + | insecticidal toxin complex TERM 4481 4228673 - 4228699 + F 71 -9.4 -2.90941 | opp_overlap 4228665, overlap 4228695 AATATTAGCCGCAGA GCCTAACCGG CCCCTTC CCGGTCAGGC TCTATACCCTGTCAT YPTB3554 4228799 - 4229101 + | putative phage-related protein YPTB3555 4229114 - 4229515 + | putative phage-related protein YPTB3556 4229503 - 4229871 + | hypothetical protein TERM 4482 4230528 - 4230553 + G 71 -3.1 -4.96848 | opp_overlap 4230521 4230540, overlap 4230540 GCGAGCAAGCCAACG GCGGCCTGAAA ACGG TTACCGACCGC TTTTTCTATGGCGAA TERM 4483 4231188 - 4231161 - g 80 -7 -4.54821 | ACCGTAATCAGAAAA TCGTACCGGAAA CCAC TTACCGCTACGA TGCACTGTATCAGCT YPTB3557 4230131 - 4232989 + | putative insecticidal toxin TERM 4484 4233005 - 4233032 + T 95 -14.3 -2.88861 | opp_overlap 4232999 4232998, overlap 4233007 TTTATTAATTCGAGG CACCTTCCCTA CTTGAA TAGGGAAGGTG TCTATACCCGTAATA TERM 4485 4233007 - 4233030 + T 79 -11.1 -2.99471 | opp_overlap 4232999 4232998, overlap 4233005 TATTAATTCGAGGCA CCTTCCCTA CTTGAA TAGGGAAGG TGTCTATACCCGTAA TERM 4486 4233115 - 4233158 + T 100 -17.1 -2.79679 | opp_overlap 4233110 4233107 4233109, overlap 4233116 ACTAATATACCGATA CTTTGTTGGCACAAAATTT AATATC AAATTTAGTGCCAACAAAG TCTACTACCCATATT tldD 4234635 - 4233190 - | protease TldD YPTB3559 4235516 - 4234647 - | putative carbon-nitrogen hydrolase YPTB3560 4239436 - 4235513 - | hypothetical protein TERM 4487 4236968 - 4236989 + g 71 -3 -4.96848 | gap 1 GTTCACCTGAACATG CAGTGG-CA ATGCC TGACCGCTG TTTTTATCTAGCGGC TERM 4488 4237905 - 4237926 + g 85 -10.1 -4.07687 | opp_overlap 4237909 GCATCGGTGGCATCA TACAGGCGG ATGC CCGCCAGTA TTTTCAGCCACGGCT cafA 4240999 - 4239530 - | ribonuclease G maf 4241588 - 4240989 - | Maf-like protein mreD 4242084 - 4241596 - | rod shape-determining protein MreD mreC 4243076 - 4242081 - | cell wall structural complex MreBCD transmembrane component MreC mreB 4244324 - 4243281 - | rod shape-determining protein MreB TERM 4489 4243875 - 4243896 + g 73 -10.1 -3.14878 | opp_overlap 4243869, overlap 4243873 AACAGGCAAGCCCGC GCCAATGGC CGCA GCCATCGGC TCTTCAATTAGGAAC TERM 4490 4244092 - 4244077 - G 75 -6 -4.55295 | opp_overlap 4244076 4244078, overlap 4244078 TCCGTGACAAAGAAA TCGGCG ATAA CGCCGT CTTTCATTGGACGAA TERM 4491 4244091 - 4244078 - G 73 -9.5 -3.32695 | opp_overlap 4244076 4244078, overlap 4244077 CCGTGACAAAGAAAT CGGCG ATAA CGCCG TCTTTCATTGGACGA TERM 4492 4244078 - 4244091 + g 74 -9.5 -3.54146 | opp_overlap 4244078 4244077, overlap 4244076 CCGTGACAAAGAAAT CGGCG ATAA CGCCG TCTTTCATTGGACGA TERM 4493 4244659 - 4244669 + r 84 -2.6 -5.63517 | AGGCTAACATGGCCC TATT ACG AATA TTTTTTCTTTCCGGA yhdA 4246577 - 4244661 - | regulatory protein CsrD TERM 4494 4246450 - 4246465 + g 75 -5.4 -4.77165 | GCGGTCACAATACTT TGGAGC CGTT GTTCCA TTTTCTTCTGGCACA TERM 4495 4246826 - 4246839 + H 84 -3.8 -5.4433 | CGCTATATTGGCTCA CCCT TAACAC AGGG TTTTTATTTCTGTCT yhdH 4246978 - 4247955 + | zinc-binding dehydrogenase TERM 4496 4248059 - 4248027 - f 89 -12 -3.26947 | opp_overlap 4248022 4248021 TAATCGTTACAGCAA CCACCGAGGTCAGT TTCAC ACTTGCCTCGGTGG TAGAAATTTCATATT TERM 4497 4248866 - 4248852 - g 71 -4.2 -4.82901 | opp_overlap 4248865 GCCTGGGCAGAAAAA CCGC TTTATTG GCGG GGGACTGGACTACCC TERM 4498 4248892 - 4248927 + G 73 -7.4 -4.14859 | opp_overlap 4248910 TACCCCTATGTCGAA GGGCTGCGGTTGGATG AAGC CATGCACCCGCTGGCC TTTATGGTTGTTGGT YPTB3568 4248178 - 4249278 + | putative sulfite oxidase subunit YedY YPTB3569 4249278 - 4249898 + | putative sulfite oxidase subunit YedZ aroQ 4250161 - 4250613 + | 3-dehydroquinate dehydratase accB 4250726 - 4251235 + | acetyl-CoA carboxylase biotin carboxyl carrier protein subunit accC 4251247 - 4252596 + | acetyl-CoA carboxylase biotin carboxylase subunit TERM 4499 4252651 - 4252692 + F 100 -13.1 -5.26316 | opp_overlap 4252651, overlap 4252652 4252653 GGCCGGTTAATTGAA TTGCCCCCCAATATTGGAT AATA ACCTGATATTGGGGGGCGG TTTTTTATGGCATAA TERM 4500 4252652 - 4252691 + F 100 -14.4 -3.75067 | opp_overlap 4252651, overlap 4252651 4252653 GCCGGTTAATTGAAT TGCCCCCCAATATTGGAT AATA ACCTGATATTGGGGGGCG GTTTTTTATGGCATA TERM 4501 4252653 - 4252690 + F 100 -15.7 -2.84317 | opp_overlap 4252651, overlap 4252652 4252651 CCGGTTAATTGAATT GCCCCCCAATATTGGAT AATA ACCTGATATTGGGGGGC GGTTTTTTATGGCAT TERM 4502 4252721 - 4252753 + F 86 -12.1 -3.20435 | opp_overlap 4252722, overlap 4252722 AAACTGAAGTTAAAA AGCCTGAATTCTGTA GAG TGCGGAATTCAGGCC TTGATGGCTAATTAA TERM 4503 4252722 - 4252752 + F 100 -15.6 -2.5194 | opp_overlap 4252722, overlap 4252721 AACTGAAGTTAAAAA GCCTGAATTCTGTA GAG TGCGGAATTCAGGC CTTGATGGCTAATTA TERM 4504 4252752 - 4252722 - f 100 -11.2 -4.75776 | opp_overlap 4252722 4252721 AACTGAAGTTAAAAA GCCTGAATTCTGTA GAG TGCGGAATTCAGGC CTTGATGGCTAATTA TERM 4505 4252816 - 4252837 + F 75 -2.3 -5.40004 | overlap 4252817 AGCCGTATATCTTAC CTTCAGTTT ATTT AAGCTGAAA TTTTTTAATTTGCTC yhdT 4254078 - 4254320 + | hypothetical protein TERM 4506 4254429 - 4254443 + G 75 -5.6 -4.66938 | ATATTTTATCGGCAA CCGTTC GAT GGGCGG TTTTGTATTGGCGAT panF 4254310 - 4255764 + | sodium/panthothenate symporter TERM 4507 4255823 - 4255792 - f 100 -15.9 -2.77148 | overlap 4255789 4255787 4255785 TCTATCAACACATCA GCCGGTATCGTGG TTATGG CCCCGATACCGGC GCTTGAGAGAATTGC TERM 4508 4256520 - 4256488 - g 78 -9.2 -4.09685 | gap 1, opp_overlap 4256480 CTGTATCTGGCAAAA GACCA-GCCCGCAGA ACTA TCTGCTGACGTGGTC GTGGCCAATATTCTG TERM 4509 4256688 - 4256659 - g 71 -7.2 -3.99324 | GCCTATGAGGATAAA TTCATTCTCGAC CCAGTC GCCGAGAAAGAA GAATGGTGCCGCATT prmA 4255840 - 4256721 + | ribosomal protein L11 methyltransferase YPTB3576 4257310 - 4258275 + | tRNA-dihydrouridine synthase B fis 4258300 - 4258596 + | DNA-binding protein Fis TERM 4510 4258626 - 4258651 + T 75 -2.4 -5.32882 | AATGTTGTTTAAAAA GGCGTTTTCC TTAATT GGTTAGCGCC TTTTTTATAATAATG YPTB3578 4259826 - 4259350 - | hypothetical protein YPTB3579 4260566 - 4259892 - | GntR family transcriptional regulator YPTB3580 4262020 - 4260656 - | major facilitator superfamily metabolite symporter YPTB3581 4262569 - 4262174 - | putative gamma carboxymuconolactone decarboxylase YPTB3582 4263664 - 4262774 - | putative 2-hydroxy-3-oxopropionate reductase YPTB3583 4264541 - 4263729 - | hypothetical protein pcp 4265017 - 4265484 + | outer membrane lipoprotein TERM 4511 4265494 - 4265515 + F 70 -5.8 -4.26188 | opp_overlap 4265494 CGCTAAACGTAGCAA CCGGGG GGCACGTTAA CCCCGG TTTTCAGTCTGTAGG TERM 4512 4265519 - 4265555 + F 78 -10.3 -3.33162 | gap 1, overlap 4265520 CGTTAACCCCGGTTT TCAGTCTGTAGGC-TG ATAGCC CATGCCTACGGACTGG TTATCAAATGCCGTA TERM 4513 4265520 - 4265554 + F 80 -11.6 -2.59683 | gap 1, overlap 4265519 GTTAACCCCGGTTTT CAGTCTGTAGGC-TG ATAGCC CATGCCTACGGACTG GTTATCAAATGCCGT cspa1 4266018 - 4266230 + | major cold shock protein Cspa1 cspa1 4266490 - 4266702 + | major cold shock protein Cspa1 cspa2 4266962 - 4267174 + | major cold shock protein Cspa2 TERM 4514 4267275 - 4267254 - f 78 -4.4 -5.12068 | opp_overlap 4267257, overlap 4267257 CATACCGAATAAAAA GAACCTGC CTCCGT GCAGGTTT TTTTGTGCCTATGAC TERM 4515 4267257 - 4267272 + F 100 -6.1 -5.65177 | opp_overlap 4267257 4267254 ACCGAATAAAAAGAA CCTGC CTCCGT GCAGG TTTTTTTGTGCCTAT TERM 4516 4267272 - 4267257 - f 77 -6.1 -4.64495 | opp_overlap 4267257, overlap 4267254 ACCGAATAAAAAGAA CCTGC CTCCGT GCAGG TTTTTTTGTGCCTAT TERM 4517 4267611 - 4267627 + G 71 -2.9 -4.93296 | overlap 4267610 4267612 TCTTAAAAGTGAGAC TCAGGAC CCT GTGCTGG TTTTTATCGTCATGG TERM 4518 4268628 - 4268613 - g 85 -6.2 -5.04082 | overlap 4268602 CAAAGAACAAGAAAA TGTCTT ATCC AAGACA CTTAACATTCTTGAG YPTB3588 4267510 - 4268685 + | hypothetical protein TERM 4519 4268813 - 4268768 - T 88 -6.8 -5.12707 | opp_overlap 4268768 4268767 TTAAAGCGTAAAAAA CCCGCGCATGGACTGGCC CCATAAAGTT GGACAGTTCATACCCGGG CTTGTCAGGAAAGAT YPTB3589 4270183 - 4268837 - | hypothetical protein TERM 4520 4270810 - 4270828 + G 71 -6.7 -4.1552 | CCATTCTGCTTTATT TGGCCGA TAAAT TCGGTCA TTTCTTACCAAAATC yghU 4270434 - 4271288 + | putative glutathione S-transferase YghU TERM 4521 4271328 - 4271353 + T 86 -9 -4.32857 | gap 1, opp_overlap 4271328 GACTTGATAAAAAAA CACCGC-GCGG CCATA CCGTTGCGGTG TTTCTCTTTCACGCG TERM 4522 4271353 - 4271328 - T 100 -7.5 -5.626 | gap 1, opp_overlap 4271328 GACTTGATAAAAAAA CACCGC-GCGGC CAT ACCGTTGCGGTG TTTCTCTTTCACGCG YPTB3591 4271992 - 4271387 - | putative phosphosugar isomerase/binding protein YPTB3592 4273626 - 4271989 - | putative carbohydrate kinase YPTB3593 4274598 - 4273645 - | ABC sugar transporter, permease subunit YPTB3594 4275589 - 4274600 - | ABC sugar transporter, permease subunit TERM 4523 4275565 - 4275548 - G 73 -5.5 -4.55118 | opp_overlap 4275555 CAACCCGAGATAAAA CTCATGG TGCC CCGTGAG TTGGCGCAGTTTTAG YPTB3595 4277078 - 4275582 - | sugar ABC transporter ATPase YPTB3596 4278271 - 4277282 - | ABC transporter, periplasmic sugar binding protein ddg 4279078 - 4279998 + | lipid A biosynthesis palmitoleoyl acyltransferase TERM 4524 4280772 - 4280740 - g 88 -8.4 -4.74801 | opp_overlap 4280739 4280740 TAATCTGAGCAAAAA GCGGCCATTAACGC GAAAT GCGTTAGTCACCGC CTTTGGTGAACCCAT YPTB3598 4280150 - 4281337 + | hypothetical protein TERM 4525 4281547 - 4281530 - T 82 -10.5 -3.61268 | CATGTAATCGGTAAA CGGGGCC AAAT AGCCCCG TCCGTAAGATATTAA yjcE 4283208 - 4281559 - | Na(+)/H(+) exchanger protein TERM 4526 4283405 - 4283369 - R 76 -9.3 -3.45514 | overlap 4283363 4283370 GATATATAACATTAA GTTCACATCGGGGAGGA TAA TCCCCCCCGATGCCTGC AACCAATTGTTATTA yjcD 4284928 - 4283573 - | putative xanthine/uracil permease TERM 4527 4284027 - 4284004 - G 71 -4.6 -4.64657 | gap 1, opp_overlap 4284025, overlap 4284006 CCAAACCCGCAAAAA TG-CTACTGAC GGA GTCAGTGGTCA GCGCTTTACCACCGC TERM 4528 4284756 - 4284743 - G 70 -8.1 -3.86346 | opp_overlap 4284750, overlap 4284745 GCAGGTCGCGACAAA CACCG CCGT CGGTG GGAAACCGGCTTTGC TERM 4529 4285270 - 4285311 + H 88 -11.1 -3.75015 | gap 1, opp_overlap 4285264 4285273 4285275, overlap 4285274 GAATAAACATCGCTC AAACACCTTATTGTAGCTAC ATC GTAGCTACAATAAGG-GTAA TTTAATGGAGGTTAT TERM 4530 4285308 - 4285273 - H 100 -17.2 -3.58329 | gap 1, opp_overlap 4285270 4285274, overlap 4285264 4285275 TAAACATCGCTCAAA CACCTTATTGTAGCTAC ATC GTAGCTACAATAAGG-G TAATTTAATGGAGGT TERM 4531 4285274 - 4285308 + H 100 -17.4 -2.96873 | opp_overlap 4285273 4285264 4285275, overlap 4285270 AAACATCGCTCAAAC ACCTTATTGTAGCTAC ATC GTAGCTACAATAAGGG TAATTTAATGGAGGT TERM 4532 4285307 - 4285275 - H 100 -20.9 -3.36341 | opp_overlap 4285274 4285270, overlap 4285273 4285264 AACATCGCTCAAACA CCTTATTGTAGCTAC ATC GTAGCTACAATAAGG GTAATTTAATGGAGG YPTB3601 4285383 - 4285586 + | putative DNA-damage-inducible protein TERM 4533 4285642 - 4285625 - T 70 -2.7 -5.00884 | AGCCGCTTTAAAAAA GATGCAA AGCG TTACACC AAGAATAAAAAGGCG TERM 4534 4285751 - 4285725 - T 84 -10.1 -3.82218 | gap 1, opp_overlap 4285734, overlap 4285726 4285741 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 4535 4285752 - 4285726 - T 72 -10.1 -2.88849 | gap 1, opp_overlap 4285734, overlap 4285725 4285741 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT ssuB 4287020 - 4286205 - | aliphatic sulfonates transport ATP-binding subunit TERM 4536 4286587 - 4286563 - G 100 -11.3 -4.57882 | TCCAACAACAATAAA CGGGGGCGATG GAT CAGCGCCCGCG CCAGTGCAACACGTT ssuC 4287814 - 4287017 - | ABC aliphatic sulfonates transporter, permease subunit ssuD 4288971 - 4287823 - | alkanesulfonate monooxygenase TERM 4537 4288865 - 4288843 - G 70 -9.9 -3.1332 | gap 1, opp_overlap 4288841 CAACACACCACCGAA CCCAAGCCGG TCAG CCG-CTTGGG CAATTTGCTGTAGAT ssuA 4290096 - 4288990 - | alkanesulfonate transporter substrate-binding subunit ssuE 4290692 - 4290111 - | NAD(P)H-dependent FMN reductase YPTB3607 4291163 - 4291864 + | putative deoxyribose-phosphate aldolase TERM 4538 4292216 - 4292236 + G 83 -11.9 -3.58536 | GAGGTCGCCTATGCG GGTGTCGTC GGT GATGACACC TTTGGCCATGAATTT YPTB3608 4292045 - 4292974 + | carbohydrate kinase YPTB3609 4292980 - 4293483 + | putative carbohydrate transport protein YPTB3610 4294521 - 4293643 - | AraC family transcriptional regulator YPTB3611 4294779 - 4295909 + | putative oxidoreductase YPTB3612 4295906 - 4296805 + | hypothetical protein TERM 4539 4296864 - 4296842 - T 100 -4 -6.14618 | opp_overlap 4296843, overlap 4296843 TATAAAACAAAAAAA TGTGGCTGGC TAA ACCAGTCACT TTGTATAACTAAAAA TERM 4540 4296843 - 4296863 + T 80 -9 -4.0641 | opp_overlap 4296842 4296843 ATAAAACAAAAAAAT GTGGCTGG CTAAA CCAGTCAC TTTGTATAACTAAAA TERM 4541 4296863 - 4296843 - T 75 -7.5 -4.25111 | opp_overlap 4296843, overlap 4296842 ATAAAACAAAAAAAT GTGGCTGGC TAA ACCAGTCAC TTTGTATAACTAAAA YPTB3613 4297327 - 4297082 - | putative Rhs accessory genetic element TERM 4542 4297475 - 4297506 + r 78 -10.4 -3.39668 | gap 1, opp_overlap 4297475, overlap 4297479 CTGCCTTTAAAATAA GTAAGCCAAAA-TCT GAA GGAGTTTTGGCTTAC TTGTCGACTTTAAAG TERM 4543 4297506 - 4297475 - R 88 -9.7 -4.17048 | gap 1, opp_overlap 4297475 4297479 CTGCCTTTAAAATAA GTAAGCCAAAATCT GAAGG AG-TTTTGGCTTAC TTGTCGACTTTAAAG YPTB3614 4297797 - 4297516 - | hypothetical protein TERM 4544 4297725 - 4297769 + g 100 -6 -5.64006 | ATGTCTGAACCTCAT TAAAATTATCTATAGCTTGA TTAAT TCCATCTATAGCTAATTTTA TTTTTTTCATTGCAT YPTB3615 4302356 - 4297794 - | hypothetical protein TERM 4545 4298849 - 4298861 + g 73 -4.7 -4.69027 | overlap 4298830 4298853 AGCGCCACAGCTGTG GCCGG TAG CCGTC TTTTTGGCTGCGTTT TERM 4546 4301407 - 4301424 + g 70 -2.5 -5.00616 | overlap 4301408 TTATGGGTAGCGTTG ACCGCGG TATT CGGCGGC TTTTTTAAGGAGCGA TERM 4547 4302261 - 4302289 + g 79 -10.2 -3.62096 | opp_overlap 4302256, overlap 4302259 GACCTGATAATCCGT CCGCGCCGGG CTCTGTTGC CCCAGCGCGG TTTGACGTAATGCCG YPTB3616 4302823 - 4302401 - | hypothetical protein TERM 4548 4302642 - 4302656 + g 75 -11.4 -2.74144 | overlap 4302641 TAGTGATTTAATTGC CGGCTC AGA GAGCCG ATTTCCCGGTCAAAG YPTB3617 4305024 - 4302826 - | putative Rhs accessory genetic element TERM 4549 4303058 - 4303037 - G 73 -5.1 -4.65916 | gap 1, opp_overlap 4303037, overlap 4303039 TTCACCTGAATAAAA TTCG-CGCAG GTA CTGCGACGCA CTTTGATCGTCTCGG TERM 4550 4303558 - 4303537 - G 70 -2.1 -4.85599 | opp_overlap 4303538 4303540, overlap 4303538 GCGATCCCATAAAAA TTGCAGGCG GATG CGCCCGTAT TCGTCGCAGTAAATC TERM 4551 4304808 - 4304828 + g 71 -7.5 -4.08767 | overlap 4304809 4304815 CGCCGTCCAGGACTT TTGCCTTGG CAT CCAGGGCGG TTTTAGCCACCTCGG TERM 4552 4305132 - 4305144 + H 78 -10.5 -3.39449 | opp_overlap 4305130 4305132 TTTGTTTTATCAAGA CCGGC GAG GCCGG TTGATGTTCATCGGC TERM 4553 4305144 - 4305132 - H 77 -10.5 -3.13403 | opp_overlap 4305132, overlap 4305130 TTTGTTTTATCAAGA CCGGC GAG GCCGG TTGATGTTCATCGGC TERM 4554 4305518 - 4305486 - g 71 -2.6 -4.95843 | opp_overlap 4305490 ACATAAAACACAAAA GGAAGTCGCGACCC GTATT GGCTTGCAACTTTC ACAGTACAATAAATA YPTB3618 4305385 - 4305792 + | putative transcriptional regulatory protein TERM 4555 4305843 - 4305812 - f 93 -12.3 -3.0752 | overlap 4305814 CACAGTATTTTAACA CAGGGTTGAGGTG TATCAG CACCTCAGCCCCG CTAACCACAAGCAAC TERM 4556 4305841 - 4305814 - f 84 -11.3 -3.09289 | overlap 4305812 CAGTATTTTAACACA GGGTTGAGGTG TATCAG CACCTCAGCCC CGCTAACCACAAGCA YPTB3619 4306095 - 4306448 + | hypothetical protein TERM 4557 4306497 - 4306462 - T 100 -12.9 -4.92314 | gap 1, opp_overlap 4306459 4306462 4306465 4306465, overlap 4306466 4306474 4306480 AGCAACTGATAAAAA TAACT-GGAAAGATCC AAAGA GGATCTTTCCAAGTTA CTCTTTAAAATTATG TERM 4558 4306462 - 4306497 + T 91 -12.9 -2.65126 | gap 1, opp_overlap 4306462 4306466 4306474 4306480, overlap 4306459 4306465 4306465 AGCAACTGATAAAAA TAACT-GGAAAGATCC AAAGA GGATCTTTCCAAGTTA CTCTTTAAAATTATG TERM 4559 4306465 - 4306494 + T 80 -10.2 -3.46687 | gap 1, opp_overlap 4306462 4306466 4306474 4306480, overlap 4306462 4306459 4306465 AACTGATAAAAATAA CT-GGAAAGATCC AAAGA GGATCTTTCCAAG TTACTCTTTAAAATT TERM 4560 4306465 - 4306493 + T 74 -10.4 -2.67289 | opp_overlap 4306462 4306466 4306474 4306480, overlap 4306465 4306462 4306459 AACTGATAAAAATAA CTGGAAAGATCC AAAGA GGATCTTTCCAA GTTACTCTTTAAAAT TERM 4561 4306492 - 4306466 - T 100 -13.9 -3.31603 | opp_overlap 4306465 4306465 4306462 4306459, overlap 4306462 4306474 4306480 ACTGATAAAAATAAC TGGAAAGATCC AAAGA GGATCTTTCCA AGTTACTCTTTAAAA YPTB3620 4307125 - 4306508 - | hypothetical protein TERM 4562 4307010 - 4307024 + g 71 -5 -4.59853 | AGTAGTAATGACAGG TCTTCT CCA AGAGGA TTTTTGGGCCATTCA YPTB3621 4311404 - 4307136 - | hypothetical protein TERM 4563 4309396 - 4309423 + g 72 -10.6 -2.93348 | GAATGGTTTTCAGCA TCGATGACCGTC AGCA GATGGCCATCGA TATCATATTCGTAGC TERM 4564 4311261 - 4311246 - G 74 -6.8 -4.34488 | overlap 4311248 CATACCCACAATAAA GCCGGT AGCG ACCAGC GTCGCCCCGCCGGTG YPTB3622 4311855 - 4311397 - | hypothetical protein YPTB3623 4314080 - 4311861 - | putative Rhs accessory genetic element TERM 4565 4312617 - 4312596 - G 70 -2.1 -4.85599 | opp_overlap 4312597 4312599, overlap 4312597 GCGATCCCATAAAAA TTGCAGGCG GATG CGCCCGTAT TCGTCGCAGTAAATC TERM 4566 4313867 - 4313887 + g 71 -7.5 -4.08767 | overlap 4313868 4313874 CGCCGTCCAGGACTT TTGCCTTGG CAT CCAGGGCGG TTTTAGCCACCTCGG YPTB3624 4315415 - 4314102 - | hypothetical protein TERM 4567 4314200 - 4314188 - G 73 -10.5 -3.13403 | opp_overlap 4314188, overlap 4314186 TTTGTTTTATCAAGA CCGGC GAG GCCGG TTGATGTTCATCGGC TERM 4568 4314188 - 4314200 + g 75 -10.5 -3.39449 | opp_overlap 4314188 4314186 TTTGTTTTATCAAGA CCGGC GAG GCCGG TTGATGTTCATCGGC TERM 4569 4315184 - 4315194 + g 79 -2.4 -5.47218 | opp_overlap 4315184 AGCCCTCGGTGAAAC CGGC CAG GCCA TTTTTTTGGGTGCGG YPTB3625 4319073 - 4315540 - | hypothetical protein TERM 4570 4316389 - 4316407 + g 77 -8.8 -4.18018 | overlap 4316390 CGCCTTCAACGCCGC TTTGCCCG GCG CGGGCGAG TTTTGGATCGCCAAC TERM 4571 4316390 - 4316406 + g 73 -10.1 -3.10597 | overlap 4316389 GCCTTCAACGCCGCT TTGCCCG GCG CGGGCGA GTTTTGGATCGCCAA TERM 4572 4317706 - 4317731 + g 91 -6.9 -5.24129 | CAGGGCACCCACCCC CGAGAAAATGA ACAT TCGCTTTCTCG TTTTTTGTAGCCAGA TERM 4573 4318742 - 4318756 + g 71 -2.8 -4.91084 | AGTTGGTGCTTCCAG CCATTG AGG TAGTGG TTTTGTTGTTCGATA TERM 4574 4319018 - 4318996 - G 84 -12.8 -3.23711 | opp_overlap 4318995 4318996, overlap 4318988 CGCACAAGCCATCAA CGCCAATACC ACC GGTATTGACG CTTTAAGGCGAGGAA YPTB3626 4320493 - 4319105 - | hypothetical protein TERM 4575 4319954 - 4319920 - G 71 -10.1 -2.78463 | gap 1, overlap 4319950 AGGTGTTGGATGAGA GCGGTTCATCAGAAGC CACT GCTTC-GATAACCCGC TCCGGTGGCCGCGCA YPTB3627 4321185 - 4320499 - | hypothetical protein YPTB3628 4321979 - 4321182 - | hypothetical protein TERM 4576 4321246 - 4321258 + g 75 -6.2 -4.54821 | GATAGCCCCAAACTG GCCG CAATA CGGC TTTTGTCATTACCGT clpB2 4324579 - 4321976 - | Clp ATPase TERM 4577 4322033 - 4322059 + g 76 -8.6 -4.08706 | overlap 4322029 TACCGCGATCCGAAT GTGGCTGATAGC GGT GCCAGCGGCCAC TTTCTGTAATAACAA TERM 4578 4323819 - 4323829 + g 73 -3.2 -4.83615 | AGCGTCATCAACTCG CTGT TAC GCAG TTTTTCTGGCACCTG YPTB3630 4325357 - 4324590 - | hypothetical protein YPTB3631 4326703 - 4325357 - | hypothetical protein TERM 4579 4325931 - 4325912 - G 71 -6.4 -4.15453 | CAACTGATGGTAAAA CGCTTCTG GATG CAGAATCG CCTGATGTGCCAAAT YPTB3632 4327251 - 4326706 - | putative lipoprotein YPTB3633 4328567 - 4327251 - | hypothetical protein TERM 4580 4328544 - 4328555 + g 76 -2.2 -5.28778 | overlap 4328538 GACGACCCGCAATGA CAGC GTTG GTTG TTTTTTATCCATGGT YPTB3634 4329781 - 4328693 - | hypothetical protein YPTB3635 4331565 - 4329745 - | hypothetical protein TERM 4581 4331359 - 4331390 + gr 73 -2.4 -5.00884 | gap 1, opp_overlap 4331360 4331363, overlap 4331360 4331363 CAACATATTCAGTAA ACCATGAGTCAATTC AGG GAATTGA-TCATCGA TTTTTTCACGCAGGT YPTB3636 4332005 - 4331565 - | hypothetical protein YPTB3637 4333493 - 4332012 - | hypothetical protein TERM 4582 4332335 - 4332349 + g 76 -8.6 -3.97406 | overlap 4332326 4332347 ACGGCAGTTGCGTGC CCAACT TGT AGTTGG TTTCTGCCATTTTCC TERM 4583 4332809 - 4332790 - G 73 -8.6 -3.80094 | GTCAAACCAAGATAA CGTGAATC TTCA GACTCACG CAGAGCACGCCATTT YPTB3638 4334058 - 4333561 - | hypothetical protein TERM 4584 4333698 - 4333725 + g 82 -5.6 -5.01732 | CTAGCGCTTCCCGTA GTTCCAGAATTT TTTT GAGCTCTGGAAC TTTTTTCGCCACATT YPTB3639 4334582 - 4335100 + | hypothetical protein TERM 4585 4335113 - 4335142 + T 100 -13.7 -4.7871 | overlap 4335114 TAATATTGTATTTCT TCAGCAGCCAATG AGGT TATTGGCTGCTGG TTTTTACTGATGGTT TERM 4586 4335114 - 4335141 + T 100 -15 -3.46141 | overlap 4335113 AATATTGTATTTCTT CAGCAGCCAATG AGGT TATTGGCTGCTG GTTTTTACTGATGGT YPTB3640 4335530 - 4335252 - | hypothetical protein TERM 4587 4335969 - 4335952 - R 100 -12.7 -5.41359 | AACCAAACGAAAAAA GGTGCGC CAAG GCGCACC AACCATCCAGCCATA malM 4336913 - 4336002 - | maltose regulon periplasmic protein TERM 4588 4336496 - 4336523 + g 73 -4.9 -4.7497 | gap 1, overlap 4336489 ATTTCATCACGCCTT GCAGGCGATCAT TGATC ATGAT-GCCCGC TTTTTCATAGGTGAA TERM 4589 4336685 - 4336675 - G 77 -8.2 -4.28774 | GCAGGCAAGGCAAAA GCGG CTA CCGC GCCTTCAACCTCACC TERM 4590 4336725 - 4336711 - G 83 -11.4 -3.52906 | opp_overlap 4336710, overlap 4336709 TCACCCTGAGAAATA TGCGGG CTG CCCGCA GTAAGTTGAATATCT TERM 4591 4337142 - 4337123 - R 80 -11.4 -2.66969 | overlap 4337119 4337120 CATCAAGATAACGTA CAGCCGCC CGCA GACGGCTG AAGAATCGCTGTTAC lamB 4338425 - 4337154 - | maltoporin malK 4339605 - 4338496 - | maltose/maltodextrin transporter ATP-binding protein TERM 4592 4339377 - 4339397 + g 72 -11.1 -2.64466 | opp_overlap 4339371, overlap 4339376 GAAACACCATGCCAA TGCCGCGCT CAG AGGGCGGCA CTTCATTCATGCGTT YPTB3644 4339845 - 4339609 - | hypothetical protein TERM 4593 4340690 - 4340728 + G 73 -7.5 -4.2828 | gap 1, opp_overlap 4340680 ACAAGTCGCCGCAAC CGGTGAT-GGCCCGGA CATTATCT TCTGGGCCCATGACCG TTTTGGTGGCTACGC malE 4340433 - 4341644 + | maltose ABC transporter periplasmic protein TERM 4594 4341683 - 4341662 - f 95 -11.5 -3.87815 | GTCTACTCTGAGAAA GGGGCACGG TTCG CCGTGCCTC GACAGAATTTGCCAT TERM 4595 4341888 - 4341874 - g 79 -2.1 -5.42198 | gap 1, overlap 4341875 GCCGAAAAAAGAAAA TC-GCC TGGT GGCAGA GTGATGCGCTTAAAT malF 4341831 - 4343408 + | maltose transporter membrane protein malG 4343422 - 4344312 + | maltose transporter permease TERM 4596 4344390 - 4344410 + T 100 -9.6 -5.24799 | overlap 4344391 GGTACTGTGTCTTTA GGGCGGCC TTAAT GGCCGCCA TTTTTATGTTTATCA TERM 4597 4344391 - 4344409 + T 100 -13.1 -3.73253 | overlap 4344390 GTACTGTGTCTTTAG GGCGGCC TTAAT GGCCGCC ATTTTTATGTTTATC yjbA 4344862 - 4344455 - | phosphate-starvation-inducible protein PsiE TERM 4598 4344786 - 4344772 - G 83 -4.2 -5.52384 | overlap 4344751 CCTTCACCAAAAAAA CCACCA AAA TAGCGG CTAACATAATCAATC TERM 4599 4344957 - 4344935 - R 100 -10.6 -5.86332 | TCAAGCCAAAAAAAA GGCCCCTTAC AGA ATAAGAGGCC TAATAAAGTACAGAT pgi 4346643 - 4344997 - | glucose-6-phosphate isomerase TERM 4600 4346358 - 4346377 + g 85 -11.4 -3.75115 | opp_overlap 4346351 4346356 4346358, overlap 4346355 GAGCAATATGCAATA CCGCACGG TCTT CTGTGCGG TTAATTTTCTCACCA lysC 4347013 - 4348398 + | aspartate kinase III TERM 4601 4348645 - 4348627 - f 74 -4.5 -4.89393 | opp_overlap 4348627, overlap 4348617 4348616 TAAACCTCAGAAAAA TGCCTGA GATCA TCGGGCA TTCACTGCTAACACG TERM 4602 4350505 - 4350494 - f 75 -5.8 -4.72272 | opp_overlap 4350500, overlap 4350495 CGTCTCCAGCAAAAA CCAC AGGG GTGG GTCAGCGCTATGGGG TERM 4603 4354118 - 4354085 - g 85 -10.9 -3.9344 | AAGCCGAACAGTAAA GACTTTGGCGGCGGC TTGG GCGGCGGCCATAGTC AAGGCAGCACCAGTG TERM 4604 4354819 - 4354795 - g 71 -4.4 -4.67982 | gap 1, overlap 4354798 TGTGACGCAACAAAA CACCCATATCA ACAG TGATA-AGGTG ACCCTGAACAGCGCT TERM 4605 4355129 - 4355116 - g 90 -8.1 -5.13722 | CTTAGGAAAAGAAAA GGACG ATAG CGTCC AGACCATCAGCTATA YPTB3652 4350725 - 4355632 + | hemolysin TERM 4606 4355703 - 4355650 - T 80 -8.9 -3.967 | opp_overlap 4355659, overlap 4355658 4355663 AATCCATTAATTAAA CTGTAATATCGAAGGGGATAAACCA ATCA CGGTTTATCCCCCTCGTTAGATCAA CATTATCTCGCCTTT TERM 4607 4355695 - 4355658 - T 100 -15.7 -3.13784 | opp_overlap 4355659, overlap 4355650 4355663 AATTAAACTGTAATA TCGAAGGGGATAAACCA ATCA CGGTTTATCCCCCTCGT TAGATCAACATTATC TERM 4608 4355659 - 4355694 + T 100 -16.3 -3.0701 | opp_overlap 4355658 4355650 4355663 ATTAAACTGTAATAT CGAAGGGGATAAACC AATCAC GGTTTATCCCCCTCG TTAGATCAACATTAT TERM 4609 4355690 - 4355663 - T 100 -15 -3.19293 | opp_overlap 4355659, overlap 4355658 4355650 AACTGTAATATCGAA GGGGATAAACCA ATCA CGGTTTATCCCC CTCGTTAGATCAACA metH 4359420 - 4355728 - | B12-dependent methionine synthase TERM 4610 4356682 - 4356717 + g 88 -7.5 -5.0133 | opp_overlap 4356702 CACCGTTGGGTTATT CCGTGCAGCCTGC AAACTGACCG GCGGGGTGCGCGG TTTTTTACGGGCATG TERM 4611 4357485 - 4357497 + g 74 -4.1 -4.9218 | CGACCTCGCCACTTT TACTG TCA CGGTA TTTTTCTGCTAAATC TERM 4612 4359843 - 4359858 + G 73 -4.6 -4.71828 | ACCGTTTACTCACGA CCATGC AACA GCAGGG TTTTGTTCGTCAGGT YPTB3654 4359638 - 4360480 + | transcriptional repressor IclR aceK 4362327 - 4360600 - | bifunctional isocitrate dehydrogenase kinase/phosphatase protein TERM 4613 4360757 - 4360738 - G 74 -2.8 -5.0133 | gap 1 CATCTCCTCAAAAAA GTG-CCTGA CTT TCCGGTCAC TGCATAAGAAATGGC TERM 4614 4362241 - 4362227 - G 71 -7.1 -4.07568 | TCGGCCTGCTCAAAA CGGTG TTGAG CACCG GCAGTGACCTCCAGA TERM 4615 4362372 - 4362349 - R 100 -12.4 -4.4009 | overlap 4362350 CCCTACCGTACAAAA CGGAGCCTGC ATAA GCAGGCTCCT GATAAGACCACACTC TERM 4616 4362371 - 4362350 - R 100 -15.9 -3.23733 | overlap 4362349 CCTACCGTACAAAAC GGAGCCTGC ATAA GCAGGCTCC TGATAAGACCACACT aceA 4363707 - 4362400 - | isocitrate lyase aceB 4365352 - 4363754 - | malate synthase TERM 4617 4364741 - 4364730 - G 73 -7.2 -4.27843 | opp_overlap 4364733, overlap 4364727 GGCAAATAGAAATAA GGGC CGCT GCCC TTCGCCAGCAGTTGC TERM 4618 4365728 - 4365708 - R 70 -7.5 -3.8165 | opp_overlap 4365707, overlap 4365706 GGGAAGAAAATAATA GGCGGCC TCGATTC AGCCGCC ATAATTAGCATCTAT metA 4366702 - 4365773 - | homoserine O-succinyltransferase TERM 4619 4367439 - 4367407 - H 100 -13.6 -4.62783 | gap 1, opp_overlap 4367407 4367414, overlap 4367414 GACGGATCGCAAAAA CAGAAAAGGCCACCC TAAT GGATGGCC-TTTCTG TTTATTTGATACCTG TERM 4620 4367407 - 4367439 + H 100 -11.4 -4.50627 | gap 1, opp_overlap 4367407 4367414, overlap 4367414 GACGGATCGCAAAAA CAGAAAAGGCCACCC TAAT GGATGGCC-TTTCTG TTTATTTGATACCTG TERM 4621 4367433 - 4367414 - H 100 -11.4 -4.98672 | opp_overlap 4367407 4367414, overlap 4367407 CGCAAAAACAGAAAA GGCCACCC TAAT GGATGGCC TTTCTGTTTATTTGA TERM 4622 4367414 - 4367433 + H 95 -9.2 -4.50993 | opp_overlap 4367414 4367407, overlap 4367407 CGCAAAAACAGAAAA GGCCACCC TAAT GGATGGCC TTTCTGTTTATTTGA TERM 4623 4367917 - 4367907 - H 74 -6.8 -4.27316 | opp_overlap 4367907 TCTCTCAATTCAAAA CACC TTC GGTG TTGTAAGGTTAAGCC TERM 4624 4369029 - 4369040 + H 74 -4.4 -5.06816 | CCACTTTCGTGTTTG CACA GTGC TGTG TTTTTATTAAACAGT TERM 4625 4369076 - 4369102 + H 70 -9.4 -2.75844 | opp_overlap 4369052 4369054, overlap 4369075 4369078 CCAGCTGGTATCTGC GACTGGCTTCAG CTC CAGGAGCTAGTC CTTTCACCTAACGCC TERM 4626 4369536 - 4369554 + H 82 -10.3 -3.57798 | overlap 4369529 CTTGGTCTTCCGGCG TGCGGGT TTTTC ACCCGCA TTATCGTTACTTATG TERM 4627 4373736 - 4373722 - g 70 -7.8 -3.87075 | opp_overlap 4373726, overlap 4373726 ACTATTGGTCATAAA GCCATG CTA CACGGC TGTACCATTGGTAAC YPTB3659 4373446 - 4373988 + | putative transferase aroE 4374864 - 4374043 - | shikimate 5-dehydrogenase YPTB3661 4375445 - 4374873 - | putative ribosome maturation factor TERM 4628 4374948 - 4374931 - G 74 -9.1 -3.67792 | overlap 4374941 TCAGATGGATTCAAA CGGCCAC CAAC GTGACCG GATAACACCGGTAAT YPTB3662 4376007 - 4375447 - | putative DNA-binding protein YPTB3663 4376500 - 4376027 - | hypothetical protein YPTB3664 4377593 - 4376472 - | hypothetical protein TERM 4629 4376918 - 4376896 - GH 72 -7.1 -3.91084 | gap 1, overlap 4376898 CGAGCGGTAATCAAA GA-GCCACTT TTTA AAGTGGCCTC AACGACTAACACAGC TERM 4630 4376915 - 4376898 - GH 78 -9.9 -3.54414 | overlap 4376896 AGCGGTAATCAAAGA GCCACTT TTTA AAGTGGC CTCAACGACTAACAC def 4377728 - 4378240 + | peptide deformylase TERM 4631 4378310 - 4378334 + G 91 -15 -3.17622 | overlap 4378314 GGAACTCCTGATTTT GCAGCGCGCC ATTTA GGCGCGTTGC TCTCTTCTCAACATA TERM 4632 4378314 - 4378330 + G 78 -10.8 -3.40191 | overlap 4378310 CTCCTGATTTTGCAG CGCGCC ATTTA GGCGCG TTGCTCTCTTCTCAA TERM 4633 4378613 - 4378641 + G 70 -9.5 -3.12351 | GGTTCGTTACTCCCA CGTTGGCGTGGTG CAG CACCGATCCAACG TTCAGTATGGGCGGG TERM 4634 4378744 - 4378728 - g 78 -8.1 -4.37886 | CTATGCTGCATAAAA TTGAATG TGC CATTCAA CCAGAAGATACCAGT fmt 4378265 - 4379212 + | methionyl-tRNA formyltransferase TERM 4635 4379280 - 4379295 + F 89 -6.8 -5.32944 | CTTCTCCCTTTATTT GCTGGC GTTT GTCAGC TTTTTTGGTTATGAA TERM 4636 4380558 - 4380538 - g 78 -5.3 -4.86731 | opp_overlap 4380533 GCCTGGTAAACAAAA CCTTCCACA TCC TGAGGACGG TGATGGTTTCTTCTA YPTB3667 4379306 - 4380595 + | 16S rRNA methyltransferase B TERM 4637 4381646 - 4381626 - g 77 -3.9 -5.00884 | ATGGGTGCGAAAAAA GCGATGG TACTTAT CCAACGC AGTGCTTACGTCGAT trkA 4380651 - 4382027 + | potassium transporter peripheral membrane component TERM 4638 4382402 - 4382416 + G 73 -3.6 -4.95547 | TTATGGTACATTTAT TCAAAG CAT TTTTGA TTTTGTTATTGTAGC mscL 4382166 - 4382579 + | large-conductance mechanosensitive channel TERM 4639 4382737 - 4382692 - T 100 -17.1 -2.90615 | opp_overlap 4382690 4382729, overlap 4382695 ATTTCTTTTAAATCA GAAGGCCAGTAGTAAAAAATC TATT GATTGCTTACCACTGGCCTCC CAGTTACTACCTTTT TERM 4640 4382734 - 4382695 - T 100 -15.2 -3.60151 | opp_overlap 4382690 4382729, overlap 4382692 TCTTTTAAATCAGAA GGCCAGTAGTAAAAAATC TATT GATTGCTTACCACTGGCC TCCCAGTTACTACCT YPTB3670 4382889 - 4382689 - | hypothetical protein zntR 4383402 - 4382977 - | zinc-responsive transcriptional regulator TERM 4641 4383803 - 4383840 + r 100 -20.1 -3.62032 | opp_overlap 4383815, overlap 4383804 4383815 AAGCTGTATATGGTG GGCGTAAAAAAACCGGG CAAG CCCGGTTTTTTTACGCG TTTACAGATTACTCT TERM 4642 4383804 - 4383839 + r 100 -23.6 -2.76737 | opp_overlap 4383815, overlap 4383803 4383815 AGCTGTATATGGTGG GCGTAAAAAAACCGGG CAAG CCCGGTTTTTTTACGC GTTTACAGATTACTC TERM 4643 4383828 - 4383815 - R 100 -9.5 -5.40072 | opp_overlap 4383804 4383803 4383815 GTGGGCGTAAAAAAA CCGGG CAAG CCCGG TTTTTTTACGCGTTT TERM 4644 4383815 - 4383828 + r 100 -9.5 -5.4477 | opp_overlap 4383815, overlap 4383804 4383803 GTGGGCGTAAAAAAA CCGGG CAAG CCCGG TTTTTTTACGCGTTT rplQ 4384238 - 4383849 - | 50S ribosomal protein L17 TERM 4645 4383967 - 4383993 + g 75 -11.4 -2.73123 | opp_overlap 4383951 4383964 CGAGTGTAACCACCG GCGCGGCTCGCG AAA CGCGGGCCTAGC TCGTTAAACAGTTTT TERM 4646 4384189 - 4384161 - G 77 -10.4 -3.57246 | gap 1, overlap 4384159 4384179 ATGACGAACCAAAGA GCC-GGCCATGTT ACGG AACATAGCCTGGC GATGGCTGCTGTTAC rpoA 4385268 - 4384279 - | DNA-directed RNA polymerase subunit alpha TERM 4647 4384362 - 4384374 + g 75 -3.4 -5.01732 | CGAGCACGTCTTTAA TCTC AGTAA GAGA TTTTTTACCCAGGTT TERM 4648 4385309 - 4385291 - R 77 -10.4 -3.14132 | TCTCTTTGGTACTAA GCTTTACT TGG AGTAAAGC TCGACGATCAGGTGT rpsD 4385914 - 4385294 - | 30S ribosomal protein S4 TERM 4649 4385955 - 4385939 - R 82 -7.9 -4.42851 | opp_overlap 4385939 4385938 CCAACAAACCTAAAA GCAGCGT TAT ACGCGGC GCTTTTTCGGCGGAC rpsK 4386334 - 4385945 - | 30S ribosomal protein S11 rpsM 4386707 - 4386351 - | 30S ribosomal protein S13 TERM 4650 4386824 - 4386795 - R 100 -12.3 -4.61868 | gap 1 CAGTCACATACAAAA GATTG-GCTGGCTA ATC TAGCCAGCTCAACC CAACTTTGCAAGAAA rpmJ 4386971 - 4386855 - | 50S ribosomal protein L36 secY 4388336 - 4387005 - | preprotein translocase subunit SecY TERM 4651 4387902 - 4387873 - G 78 -7.9 -4.45168 | overlap 4387897 GCGGTAAAATAGAAA GCAAAGCCTGG ATTGATTA CCAGACCTTGC ATCCCAGGCATATTC rplO 4388778 - 4388344 - | 50S ribosomal protein L15 rpmD 4388961 - 4388782 - | 50S ribosomal protein L30 rpsE 4389467 - 4388964 - | 30S ribosomal protein S5 TERM 4652 4389261 - 4389281 + g 73 -4.6 -4.67353 | opp_overlap 4389259, overlap 4389259 AACGTTAATCATAGC GCGACGGG CTTTT TCCATCGC TTTTTGGATCGCTGC rplR 4389835 - 4389482 - | 50S ribosomal protein L18 rplF 4390378 - 4389845 - | 50S ribosomal protein L6 rpsH 4390785 - 4390393 - | 30S ribosomal protein S8 rpsN 4391124 - 4390819 - | 30S ribosomal protein S14 TERM 4653 4391082 - 4391103 + g 76 -8.7 -4.02021 | overlap 4391083 4391085 ATTTGTTAGCTAGTT TCACGCGAA CAAC TTCGCGTGC TTTCATTGATTGCTT TERM 4654 4391083 - 4391102 + g 81 -12.2 -3.00128 | overlap 4391082 4391085 TTTGTTAGCTAGTTT CACGCGAA CAAC TTCGCGTG CTTTCATTGATTGCT rplE 4391677 - 4391138 - | 50S ribosomal protein L5 TERM 4655 4391515 - 4391533 + g 73 -7.4 -4.30987 | opp_overlap 4391514, overlap 4391500 TTGCTGCCAAGTCAG CTGCTGCA TTA TCCAGCAG TTTCTTGTCAGCGAT rplX 4392006 - 4391692 - | 50S ribosomal protein L24 rplN 4392388 - 4392017 - | 50S ribosomal protein L14 TERM 4656 4392519 - 4392545 + r 70 -8 -3.69069 | opp_overlap 4392519, overlap 4392522 AGTGGGTAGAAAAAA TAAGCGGCCC ATTTTCA GAGCCGCTTA TTATGTTCGAGTTGG TERM 4657 4392545 - 4392519 - R 100 -10.2 -5.24531 | opp_overlap 4392519 4392522 AGTGGGTAGAAAAAA TAAGCGGCCC ATTTTCA GAGCCGCTTA TTATGTTCGAGTTGG rpsQ 4392823 - 4392569 - | 30S ribosomal protein S17 rpmC 4393014 - 4392823 - | 50S ribosomal protein L29 rplP 4393424 - 4393014 - | 50S ribosomal protein L16 rpsC 4394135 - 4393437 - | 30S ribosomal protein S3 TERM 4658 4393989 - 4394021 + g 74 -10 -3.61654 | overlap 4393990 GCGAGAAACGGAAGC TTTCGCTAATTCCT TAGTC AGGAATTGGCGAAC TTTAAAGTCGCTGTC TERM 4659 4393990 - 4394020 + g 85 -13.5 -2.76671 | overlap 4393989 CGAGAAACGGAAGCT TTCGCTAATTCCT TAGTC AGGAATTGGCGAA CTTTAAAGTCGCTGT rplV 4394485 - 4394153 - | 50S ribosomal protein L22 rpsS 4394778 - 4394500 - | 30S ribosomal protein S19 rplB 4395617 - 4394793 - | 50S ribosomal protein L2 TERM 4660 4395652 - 4395672 + r 80 -9.7 -3.57462 | opp_overlap 4395655, overlap 4395655 CTCTGCGCCGCCGAT GAAGTCCAG ATT CTGGCCTTC TTTCAGGGTGACGTA rplW 4395936 - 4395634 - | 50S ribosomal protein L23 rplD 4396538 - 4395933 - | 50S ribosomal protein L4 TERM 4661 4396506 - 4396518 + g 77 -10.5 -3.54414 | opp_overlap 4396501, overlap 4396505 TTCGGAAACAGTCAG CGCGC CTG GCGCG TCTTTCATTACCAAT rplC 4397184 - 4396555 - | 50S ribosomal protein L3 rpsJ 4397528 - 4397217 - | 30S ribosomal protein S10 bfr 4398399 - 4397926 - | bacterioferritin, iron storage and detoxification protein bfd 4398684 - 4398478 - | bacterioferritin-associated ferredoxin TERM 4662 4398776 - 4398761 - R 100 -10.4 -5.5112 | opp_overlap 4398761 TTTATCAATAAAAAA GGGTGC CGAG GCACCC TTTGGTTTGATCAAT TERM 4663 4398761 - 4398776 + r 91 -10.4 -4.10953 | opp_overlap 4398761 TTTATCAATAAAAAA GGGTGC CGAG GCACCC TTTGGTTTGATCAAT tuf 4399995 - 4398811 - | elongation factor Tu TERM 4664 4400011 - 4400044 + r 77 -10.3 -3.10579 | overlap 4400008 GACTATATTCCTTAC TCTTGTGCTCTCCCA CTAA TGAGAGAGCACTGGA TCATTGTTTTAAACC fusA 4402175 - 4400067 - | elongation factor G rpsG 4402739 - 4402269 - | 30S ribosomal protein S7 rpsL 4403210 - 4402836 - | 30S ribosomal protein S12 YPTB3706 4403635 - 4403348 - | tRNA 2-thiouridine synthesizing protein B YPTB3707 4404020 - 4403655 - | hypothetical protein TERM 4665 4403837 - 4403848 + g 77 -3 -5.30686 | overlap 4403842 AAGTAGCAATATAGT TTCT GGCA AGAA TTTTTTCTGGCTGTT YPTB3708 4404415 - 4404020 - | hypothetical protein YPTB3709 4405137 - 4404415 - | putative DNA-binding protein TERM 4666 4405360 - 4405337 - R 100 -9.6 -6.22802 | opp_overlap 4405337 GCGCACAAAAAAAAA CCGTCACGAC AATT ATCGTAACGG TTATGAGAAGAGTGT fkpA 4406191 - 4405391 - | FKBP-type peptidyl-prolyl cis-trans isomerase TERM 4667 4405553 - 4405567 + g 80 -2.8 -5.41359 | opp_overlap 4405553, overlap 4405538 TGGCGGGATAACCAA GGTG ATTTTGC CACC TTTTTTGATTTGCTT YPTB3711 4406506 - 4406724 + | hypothetical protein TERM 4668 4406929 - 4406897 - T 77 -10.7 -2.87931 | opp_overlap 4406904 4406928, overlap 4406904 GTGATCGCGTACAGA GTAAAAAGCCAGC GATGAAG GCTGGCTTTTTGC TGACGGGGTCAGATA TERM 4669 4406904 - 4406922 + T 81 -7.4 -4.72272 | opp_overlap 4406897 4406904 CGTACAGAGTAAAAA GCCAGC GATGAAG GCTGGC TTTTTGCTGACGGGG TERM 4670 4406922 - 4406904 - T 85 -7.4 -4.84527 | opp_overlap 4406904, overlap 4406897 CGTACAGAGTAAAAA GCCAGC GATGAAG GCTGGC TTTTTGCTGACGGGG slyD 4407538 - 4406945 - | FKBP-type peptidyl-prolyl cis-trans isomerase TERM 4671 4407512 - 4407523 + g 74 -4.4 -4.85545 | CTGGTAAGCCAGGCT GACT ACCA AGTC TTTTGTTACTTTCAT YPTB3713 4407854 - 4407633 - | hypothetical protein kefB 4409678 - 4407870 - | glutathione-regulated potassium-efflux system protein KefB YPTB3715 4410230 - 4409682 - | glutathione-regulated potassium-efflux system ancillary protein KefG TERM 4672 4410811 - 4410795 - g 100 -6.5 -5.63103 | overlap 4410796 TGCCAATGAAAAAAA TGATGGC CAT GCCATCG CAACCGTGCACGGTA TERM 4673 4410810 - 4410796 - g 81 -10 -3.96777 | overlap 4410795 GCCAATGAAAAAAAT GATGGC CAT GCCATC GCAACCGTGCACGGT TERM 4674 4412165 - 4412153 - g 74 -9.1 -3.65199 | opp_overlap 4412160 4412161 AATTCCGCACTCAAA CGCAG CCA CTGCG TAAGCAGATTATGAC yheS 4410481 - 4412403 + | putative ABC transporter ATP-binding protein TERM 4675 4412488 - 4412455 - f 73 -9.7 -3.04263 | opp_overlap 4412477 4412481, overlap 4412457 ATGGCATCGTGAATA TAGTCGTGCGAAT TGAGTTAG AGTCGCACGACTA GAGCGGCGTGATTTT YPTB3717 4412538 - 4413527 + | putative glycosyl transferase YPTB3718 4413620 - 4414600 + | putative sugar transferase tauD 4415461 - 4414613 - | taurine dioxygenase tauC 4416312 - 4415458 - | taurine transporter subunit TERM 4676 4415744 - 4415730 - G 80 -7 -4.64846 | overlap 4415732 CCACAAACCATAAAA CCTGCC AAC GGCTGG CACCTAATGCACGGG TERM 4677 4416129 - 4416114 - G 80 -9 -4.19258 | ATAGCTGATGCAAAA CCTGCT GTGG AGCAGG TAAAAATAACGGGCC tauB 4417076 - 4416309 - | taurine transporter ATP-binding subunit TERM 4678 4416747 - 4416767 + g 78 -9 -4.0274 | gap 1 CCGGTTTAGCATTTT CAG-GGCGG TTAC CCGCCGCTG TTCTTTACTCATCCC tauA 4418146 - 4417085 - | taurine transporter substrate binding subunit TERM 4679 4418272 - 4418234 - R 83 -12.1 -2.74597 | opp_overlap 4418241, overlap 4418241 4418245 4418250 CCGAGAGAGAGAGCA GCATAAAGGAATAAA AGAATATTG TTTATTCCTTTATGC GATAACAGATGTACT YPTB3723 4418951 - 4418349 - | LysE/RhtB family efflux protein TERM 4680 4419240 - 4419264 + G 71 -5 -4.58283 | opp_overlap 4419229, overlap 4419229 4419242 AGAAGCCCCGAGTGG TGCTCTTCCA CGGTT TGGAAGGGAA TTTTTACAGCCCTTA YPTB3724 4419053 - 4420033 + | putative hydrolase TERM 4681 4420159 - 4420144 - g 77 -4.6 -4.99035 | opp_overlap 4420148, overlap 4420146 TCACTGACAGAAAAA GTCGCA GACG TGCGCC GTCAGTTGGTCAGTG YPTB3725 4420030 - 4420266 + | hypothetical protein TERM 4682 4420758 - 4420790 + G 74 -4 -4.84311 | gap 1, overlap 4420759 TCCCTGGCACCTTTA C-TCCTTGGGAGCCG CTAC CGGAACCCACGGATG TTTTATTCTATGAAG TERM 4683 4420759 - 4420788 + G 73 -7.7 -4.03793 | overlap 4420758 CCCTGGCACCTTTAC TCCTTGGGAGCCG CTAC CGGAACCCACGGA TGTTTTATTCTATGA TERM 4684 4421100 - 4421136 + G 73 -8.7 -3.90038 | overlap 4421092 CGTTAGACGAAAGTT TCGTTGTGATCCATTTC CGT GGTTTGGATCACATCGA TTTCCCTTATTTGCT prk 4420415 - 4421284 + | phosphoribulokinase 1 YPTB3727 4421893 - 4421462 - | hypothetical protein TERM 4685 4421828 - 4421798 - G 95 -8.3 -5.3167 | overlap 4421821 GAAAAACAAAGAAAA TGAGGCGACAACA AACAA TGATATCGCCCCA CAGGCAACCGATATT TERM 4686 4421953 - 4421930 - R 93 -8.9 -4.56775 | opp_overlap 4421930 4421951 4421952 ATTTTGGCCTAAAAA CCCATAACC AAACCG GGCTATGGG TGGTTCACCATTTAC YPTB3728 4422372 - 4421965 - | hypothetical protein crp 4422708 - 4423340 + | cAMP-regulatory protein TERM 4687 4423354 - 4423384 + F 100 -14.1 -4.75063 | gap 1, opp_overlap 4423354 AATTCCCTCTAAAAA CCGGCGCTAA-GGC TGAA GCTATTAGCGCCGG TTTTTCCCGTTTTCT TERM 4688 4423384 - 4423354 - f 100 -11.9 -4.57341 | gap 1, opp_overlap 4423354 AATTCCCTCTAAAAA CCGGCGCTAA-GGC TGAA GCTATTAGCGCCGG TTTTTCCCGTTTTCT TERM 4689 4424014 - 4424002 - g 75 -5.5 -4.66833 | CTTGAACCCGAAAAA GCGAT ACC ACCGC TACTCGATAGACAAC TERM 4690 4424988 - 4424976 - g 73 -5.5 -4.56597 | opp_overlap 4424979 GTTGTTGCGTAAAAA TGCCC ATC AGGCA CTGGAGGCTTATCAG TERM 4691 4425263 - 4425229 - g 74 -10.9 -2.7682 | gap 1, overlap 4425228 CTGATCAGAGAGAAT CCATTGACTGA-GGTG GACT CACCATCAACCAATGG TCATCCACTCATGAG YPTB3730 4423426 - 4425546 + | putative efflux transporter (PET) family protein TERM 4692 4425645 - 4425671 + T 72 -10.1 -2.88849 | gap 1, opp_overlap 4425634, overlap 4425640 4425646 ACATCCATGTAGGCT CGAGCCGCGCCA TCCT TGGCGCGGA-CG CTTTACTCCTCTGCC TERM 4693 4425646 - 4425672 + T 84 -10.1 -3.82218 | gap 1, opp_overlap 4425634, overlap 4425640 4425645 CATCCATGTAGGCTC GAG-CCGCGCCA TCCT TGGCGCGGACGC TTTACTCCTCTGCCT argD 4426989 - 4425772 - | bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein TERM 4694 4427086 - 4427069 - R 76 -2.7 -5.30686 | AATATGCATAAAAAA TCATCCG CAAG CAAATGA TAAATGATGTCATGG pabA 4427697 - 4427122 - | para-aminobenzoate synthase component II YPTB3733 4429482 - 4427941 - | hypothetical protein TERM 4695 4428422 - 4428463 + g 71 -6.4 -4.26903 | overlap 4428432 TGTTCAGCACTGAAT GCCGGATTAGGCCGCATC GTCTGA GCTGCGGCTTTAACCGCC TTTTGATCCCGTGGC ppiA 4430377 - 4429808 - | peptidyl-prolyl cis-trans isomerase A (rotamase A) TERM 4696 4430596 - 4430564 - H 81 -11.3 -2.8194 | opp_overlap 4430559, overlap 4430555 TAATGAGTCACCACA TCCCAGACTCCAGCA AGA TTCTGGAGTCTGGAT CACGATTCTCTTACT TERM 4697 4430686 - 4430699 + H 81 -5.3 -5.18371 | opp_overlap 4430686 CTAATCTGCTTCAAA TGAGA GCGC TCTCA TTTTGTTTTCTGCAA TERM 4698 4430768 - 4430804 + H 78 -8.8 -3.86524 | gap 1, opp_overlap 4430770 4430772, overlap 4430769 4430772 CGGAGACCGTACAGA GACAGGCTCACC-TGAT GAAA ATCATGGTGAGCCTGAA TTTATCCACAGATAT TERM 4699 4430769 - 4430803 + H 93 -12.3 -2.91593 | gap 1, opp_overlap 4430770 4430772, overlap 4430768 4430772 GGAGACCGTACAGAG ACAGGCTCACC-TGAT GAAA ATCATGGTGAGCCTGA ATTTATCCACAGATA TERM 4700 4430802 - 4430770 - H 100 -15.8 -3.00498 | gap 1, opp_overlap 4430769 4430768 4430772, overlap 4430772 GAGACCGTACAGAGA CAGGCTCACC-TGAT GAAA ATCATGGTGAGCCTG AATTTATCCACAGAT TERM 4701 4430800 - 4430772 - H 93 -12.6 -3.05498 | gap 1, opp_overlap 4430769 4430768 4430772, overlap 4430770 GACCGTACAGAGACA GGCTCACC-TGAT GAAA ATCATGGTGAGCC TGAATTTATCCACAG TERM 4702 4430772 - 4430800 + H 88 -12.6 -2.70354 | gap 1, opp_overlap 4430772 4430770, overlap 4430769 4430768 GACCGTACAGAGACA GGCTCACC-TGAT GAAA ATCATGGTGAGCC TGAATTTATCCACAG TERM 4703 4430866 - 4430876 + H 71 -8.2 -3.53811 | ACTGAACTTTATCGC CGGC AGA GCCG TTTGGAGCCCCTACA YPTB3735 4430892 - 4432205 + | putative glycosyl hydrolase TERM 4704 4432649 - 4432669 + G 76 -2.4 -5.18357 | overlap 4432650 ACGCTGGGGTTGGTG ACCACCTC ATACC GAGGGGGC TTTTTTGGTGCCTTA TERM 4705 4432778 - 4432763 - g 73 -7.6 -4.10179 | GATAATGCAGATAAA GAATGG TTAG CCATTC AGCGGCTGTATAACT YPTB3736 4432454 - 4433440 + | LacI family transcriptional regulator TERM 4706 4433505 - 4433528 + T 100 -12.4 -3.40899 | opp_overlap 4433505 ATTAATTGTTATTAA CGTGGCAAGC CATG GCCTGCCACG TTCTGCTAGCGCATT TERM 4707 4433528 - 4433505 - T 100 -14.6 -3.16921 | opp_overlap 4433505 ATTAATTGTTATTAA CGTGGCAAGC CATG GCCTGCCACG TTCTGCTAGCGCATT YPTB3737 4435596 - 4433551 - | putative iron siderophore receptor/tonB dependent transporter TERM 4708 4434447 - 4434469 + g 71 -2.7 -4.8543 | gap 1, opp_overlap 4434447, overlap 4434447 4434448 TTAACTCACCGAACA C-CCCGTTAT TCAT AAAACGGGCG TTTTTATCCCAGTTC YPTB3738 4436082 - 4437266 + | hypothetical protein TERM 4709 4437281 - 4437309 + T 100 -14.6 -3.2827 | overlap 4437283 ATTTATCTGCGTTAC TGCCCTGCCGCC GCCAA GGTGGCAGGGTA TTGATGATTCACTAA TERM 4710 4437283 - 4437307 + T 100 -15 -3.20494 | overlap 4437281 TTATCTGCGTTACTG CCCTGCCGCC GCCAA GGTGGCAGGG TATTGATGATTCACT codA 4438649 - 4437351 - | cytosine deaminase TERM 4711 4438093 - 4438078 - G 90 -10.4 -4.35524 | CGGGTAAATTCAAAA TGGGGG ATCG CCCCCA CCGCATCCGCACCCA TERM 4712 4438477 - 4438464 - G 75 -8.1 -4.15222 | ATGCGGCTCAATAAA TGGCG GGAG CGCCA AACCGCCCTGCGCAT TERM 4713 4439002 - 4438987 - g 95 -7.6 -5.50723 | TGAGCAAAATAAAAA TTGCCA TCAT TGGCAA CGGCATGGTCGGCCA TERM 4714 4440209 - 4440198 - g 73 -7.2 -4.2123 | opp_overlap 4440197, overlap 4440199 CATGCAGGTAATAAA CCCG CCAT CGGG GTGGATTCCCTGCCA TERM 4715 4441119 - 4441107 - g 79 -10.5 -3.73072 | opp_overlap 4441106 4441107 AACGGCGGCATGAAA CCGCG TCA CGCGG ATTTACTGGCAGCCG TERM 4716 4441107 - 4441119 + G 71 -10.5 -2.83403 | opp_overlap 4441107, overlap 4441106 AACGGCGGCATGAAA CCGCG TCA CGCGG ATTTACTGGCAGCCG nirB 4438971 - 4441517 + | nitrite reductase nirD 4441514 - 4441840 + | nitrite reductase small subunit nirC 4442007 - 4442813 + | nitrite transporter NirC cysG 4442876 - 4444297 + | siroheme synthase TERM 4717 4444389 - 4444412 + T 76 -11 -2.53641 | opp_overlap 4444390, overlap 4444388 GGTTAATGCTGATTA ATGAGGGGGA AATT TCCCCCTCAC ATTACTGATGCGTTG TERM 4718 4444411 - 4444390 - T 100 -14.5 -3.16742 | opp_overlap 4444389 4444388 GTTAATGCTGATTAA TGAGGGGGA AATT TCCCCCTCA CATTACTGATGCGTT trpS 4445474 - 4444434 - | tryptophanyl-tRNA synthetase gph 4446174 - 4445476 - | phosphoglycolate phosphatase TERM 4719 4445961 - 4445935 - G 70 -8 -3.79882 | overlap 4445958 ATAATAGTGATCAAA CAGCTCGCGG GTCTGTG CCACAAGCTG AGCATTATGTTCACG rpe 4446844 - 4446167 - | ribulose-phosphate 3-epimerase dam 4447962 - 4447147 - | DNA adenine methylase TERM 4720 4447500 - 4447488 - G 87 -5.5 -5.38054 | opp_overlap 4447488 4447489, overlap 4447482 4447489 GCTCACAAACAAAAA CCGCA TTT TGCGA TTTTTCAGCAAACCA TERM 4721 4447609 - 4447586 - G 74 -9 -3.69094 | AATTCACCACTCAAA TTATAACGAC ACAG GCCGTTATAA CAGTGGCGATTGAGA TERM 4722 4447880 - 4447918 + g 75 -10.2 -3.34398 | opp_overlap 4447877, overlap 4447877 4447881 TCTATCAAACAATCT CCCGCTGGAAGATGGCGT CGT ATGTCATCAACCAGCGGA TATTTCCCACCAGCC TERM 4723 4447881 - 4447917 + g 84 -13.7 -2.60496 | opp_overlap 4447877, overlap 4447880 4447877 CTATCAAACAATCTC CCGCTGGAAGATGGCGT CGT ATGTCATCAACCAGCGG ATATTTCCCACCAGC YPTB3748 4449035 - 4448046 - | hypothetical protein aroB 4450377 - 4449289 - | 3-dehydroquinate synthase aroK 4450955 - 4450434 - | shikimate kinase I YPTB3751 4452671 - 4451304 - | putative outer membrane porin HofQ TERM 4724 4451465 - 4451481 + g 71 -8.7 -3.62418 | AAATCCCGCCCAGCA CGATGGT TTC GCCATCG TTTACAGTAACTTGT YPTB3752 4453280 - 4452870 - | hypothetical protein YPTB3753 4453845 - 4453264 - | hypothetical protein YPTB3754 4454443 - 4453838 - | hypothetical protein YPTB3755 4455339 - 4454443 - | hypothetical protein TERM 4725 4454859 - 4454849 - G 73 -8.2 -3.83323 | GCCATATAACGTAAA GCGC ATG GCGC AATATCAATCACTTG TERM 4726 4454903 - 4454885 - G 73 -8.8 -3.96327 | ACTTGTGAGGATAAA CCCGCCTG TTC CAAGCAGG CTTGCCATTGCTGCA TERM 4727 4456663 - 4456650 - g 70 -2.3 -5.00616 | overlap 4456651 4456652 4456654 CCGGTCCCCAAAAAA GCGAC TGAT GTCGT TCAGCCTGGTCAGCA mrcA 4455435 - 4458014 + | peptidoglycan synthetase TERM 4728 4458083 - 4458035 - T 100 -13.6 -5.00616 | gap 1, opp_overlap 4458047, overlap 4458047 GCCTGGTGTAAAAAA CTTATCTAAAAAGCCAGATGATC TGAT GATCATCTGGCTTTTTT-ATAAA TTACTCGTATAAAAA TERM 4729 4458072 - 4458047 - T 100 -16.3 -4.69027 | opp_overlap 4458047, overlap 4458035 AAACTTATCTAAAAA GCCAGATGATC TGAT GATCATCTGGC TTTTTTATAAATTAC TERM 4730 4458047 - 4458072 + T 100 -16.3 -5.31456 | opp_overlap 4458035 4458047 AAACTTATCTAAAAA GCCAGATGATC TGAT GATCATCTGGC TTTTTTATAAATTAC nudE 4458696 - 4458151 - | ADP-ribose diphosphatase NudE TERM 4731 4458392 - 4458382 - G 73 -8.2 -3.89617 | AGCGAGAAAGTCAAA GCGC TCA GCGC CATATCCAACTTCTT TERM 4732 4460081 - 4460068 - g 71 -3.8 -4.68593 | TTCAGTATCGAAAAA TGCG TCTATT CGCA AAGAAGATAGCGAAC TERM 4733 4461263 - 4461276 + G 75 -3.7 -5.14563 | opp_overlap 4461261, overlap 4461261 GAAGCGTTGAATAGC CCACC TCCG GGCGG TTTTTTGATCACCAG YPTB3758 4459529 - 4461676 + | hypothetical protein YPTB3759 4461820 - 4462500 + | hypothetical protein hslR 4462529 - 4462936 + | heat shock protein 15 hslO 4463099 - 4463980 + | Hsp33-like chaperonin TERM 4734 4463994 - 4464021 + F 100 -13.4 -3.82097 | AATCCTCGTAATGCT TAGCCGGGTACC TATT GGTGCCCGGCCA TTTCCTCCGTTTCAC pckA 4464177 - 4465796 + | phosphoenolpyruvate carboxykinase TERM 4735 4465830 - 4465853 + T 100 -6.7 -5.61913 | AGTTTAGCGTTACAG GGGGCAC TTTCAGAATT GTGCCCC TTTTTTCTATTTATT TERM 4736 4465949 - 4465935 - T 84 -11.4 -3.14564 | opp_overlap 4465932 TTATCCCTCCATCAA GCCACC GCT GGTGGC TTCAGACTGCTGACA TERM 4737 4466039 - 4466013 - T 78 -8.7 -3.82218 | gap 1, opp_overlap 4466022, overlap 4466016 4466029 AGGCAGAGGAGTAAA GCATCCGCGCCA AGGA TGGCGCGGCT-C GAGCCTACATGGATG TERM 4738 4466037 - 4466016 - T 83 -11.5 -2.99207 | opp_overlap 4466022, overlap 4466013 4466029 CAGAGGAGTAAAGCA TCCGCGCCA AGGA TGGCGCGGC TCGAGCCTACATGGA TERM 4739 4466138 - 4466113 - T 100 -14.1 -3.62046 | gap 1, opp_overlap 4466116, overlap 4466114 GCACTTTGTCAATAA CCTCAAGCCACC GCT GGTGGCTTG-GG CTTCACATCCAATGG TERM 4740 4466138 - 4466114 - T 95 -14.3 -2.77013 | opp_overlap 4466116, overlap 4466113 CACTTTGTCAATAAC CTCAAGCCACC GCT GGTGGCTTGGG CTTCACATCCAATGG envZ 4467467 - 4466115 - | osmolarity sensor protein ompR 4468183 - 4467464 - | osmolarity response regulator greB 4468834 - 4468319 - | transcription elongation factor GreB TERM 4741 4469519 - 4469501 - g 76 -11.8 -2.85351 | GCGGGTTAGATGATA TCCAACTG CGT CAGTTGGA AAGCCGTCTGGGGTA TERM 4742 4469619 - 4469596 - g 75 -5.8 -4.49337 | overlap 4469600 GAAGATCAAGGAAAA CTCACCGACC AGCT GGCCGGGGCG ATCAACGCCACCCTA YPTB3766 4469353 - 4471728 + | hypothetical protein TERM 4743 4471748 - 4471803 + F 100 -31 -2.90813 | opp_overlap 4471753, overlap 4471753 TGACAAGGACGGCCA TTAAACTGCCCCCCTCATTATTAGAT TGAT ATCCAATAATGAGGGGGGCAGTTTAA TAATTTAACAAAATA TERM 4744 4471798 - 4471753 - f 100 -28.7 -3.73953 | opp_overlap 4471748 4471753 AGGACGGCCATTAAA CTGCCCCCCTCATTATTAGAT TGAT ATCCAATAATGAGGGGGGCAG TTTAATAATTTAACA TERM 4745 4471753 - 4471798 + F 100 -26.5 -3.8901 | opp_overlap 4471753, overlap 4471748 AGGACGGCCATTAAA CTGCCCCCCTCATTATTAGAT TGAT ATCCAATAATGAGGGGGGCAG TTTAATAATTTAACA feoA 4472252 - 4472479 + | ferrous iron transport protein A TERM 4746 4473003 - 4472991 - g 80 -4.7 -5.11613 | opp_overlap 4472991 ACATTATCTAAAAAA CTGGG TTG CCCGG TCATTCCATTGGTAT feoB 4472571 - 4474886 + | ferrous iron transport protein B TERM 4747 4474868 - 4474882 + F 74 -10 -3.15579 | opp_overlap 4474867 TGGCTGCCGAAGTAG TGGCAG CAA CTGCCA TTGATCACCCATTAG YPTB3769 4474922 - 4475179 + | hypothetical protein TERM 4748 4475201 - 4475180 - T 100 -14.5 -3.78034 | opp_overlap 4475177 4475174 4475200 CACGCACACCAATAA GAGATGCCC ATAT GGGCATCTC AACATGTTGATTCCG YPTB3770 4475600 - 4475331 - | hypothetical protein bioH 4476546 - 4475770 - | putative biotin biosynthesis protein TERM 4749 4477162 - 4477124 - g 100 -17.5 -2.90763 | gap 1, overlap 4477142 GCTACAGCGTATACA CGCTACGCCGCCG-CAAC AGCA GCTGACGGCGGCACAGCG GCGAAAGAACGTGCG YPTB3772 4476633 - 4477334 + | gluconate periplasmic binding protein YPTB3773 4477394 - 4477969 + | putative DNA uptake protein malQ 4480250 - 4478154 - | 4-alpha-glucanotransferase YPTB3775 4482668 - 4480263 - | maltodextrin phosphorylase TERM 4750 4485333 - 4485315 - g 72 -11 -2.53263 | TCGAGGGCGAAGCCA TGGCGCAA CAA CTGCGCCA ACTGATCCAACTCAA TERM 4751 4485430 - 4485440 + G 77 -4 -5.14163 | overlap 4485432 GCATAAATTCGCGCA TTTC GAC GAAA TTTTTGTTGATAAAT malT 4482986 - 4485697 + | transcriptional regulator MalT glpE 4486072 - 4486401 + | thiosulfate sulfurtransferase TERM 4752 4486933 - 4486947 + G 70 -10 -3.13566 | opp_overlap 4486925, overlap 4486931 AAAAACGGCTTGGCA CCAGCA AAT TGCTGG TATTAACTATCGTCT glpG 4486419 - 4487255 + | intramembrane serine protease GlpG TERM 4753 4487535 - 4487523 - g 75 -6.2 -4.63218 | overlap 4487524 GTGGTCGGAAGAAAA GGCG CGGAT CGCC CAACGCGTTGCTAGC glpR 4487290 - 4488048 + | DNA-binding transcriptional repressor GlpR TERM 4754 4488207 - 4488185 - T 71 -9 -3.30159 | overlap 4488168 4488167 CCAATGGGGCCATAA GCGTGGCCCC CTT GGAACCCCGC GCTTTCGCACTATCG YPTB3780 4488948 - 4488517 - | hypothetical protein TERM 4755 4488935 - 4488959 + g 75 -7.9 -4.22524 | GAAACACGGTCACTA CGCGAGAAAAA CAA TTTTATTCGCG TTTCATTTTAACTAT YPTB3781 4489415 - 4488951 - | hypothetical protein TERM 4756 4491210 - 4491191 - g 73 -8.6 -3.90291 | gap 1 ATCCGCCTAATTAAA GGCAGCCAC ATT GTGG-TGCC CCGGGTTCATAACCA TERM 4757 4491663 - 4491648 - g 71 -6.8 -4.2558 | gap 1, opp_overlap 4491657 CAGCGTGGACTAAAA CCGGTGC CTT GC-CCGG TGGGGATATTGGCGG TERM 4758 4492003 - 4491989 - g 71 -4.2 -4.70659 | opp_overlap 4491992 GCGCACACTGAAAAA CAACAG GCG CTGCCG CTGGTTTCTTAATAG glpD 4490501 - 4492015 + | glycerol-3-phosphate dehydrogenase TERM 4759 4492035 - 4492048 + T 70 -3.9 -4.84529 | opp_overlap 4492023, overlap 4492023 AAAGTTTAACATTGT TTAAC TTTC GTTAA TTTTTGCCTTTCTGG TERM 4760 4492104 - 4492132 + T 100 -9.6 -5.0538 | gap 1, opp_overlap 4492104 CAAGAAATTTAAAAA CCCTCTTCATCGG ATAA CCGC-GAAGAGGG TTTTTTACGGTGGCA TERM 4761 4492132 - 4492104 - T 100 -11.8 -4.86939 | gap 1, opp_overlap 4492104 CAAGAAATTTAAAAA CCCTCTTCATCGG ATAA CCG-CGAAGAGGG TTTTTTACGGTGGCA glgP 4494624 - 4492177 - | glycogen phosphorylase TERM 4762 4493206 - 4493231 + g 100 -11.1 -4.63218 | opp_overlap 4493209, overlap 4493184 GTTGGCTAACCCCAA CCAGCGCCGTG GTGT CACGCCGTTGG TTTTATTGCAGAAAC glgA 4496271 - 4494841 - | glycogen synthase glgC 4497768 - 4496482 - | glucose-1-phosphate adenylyltransferase glgX 4499766 - 4497778 - | glycogen debranching enzyme TERM 4763 4497878 - 4497862 - G 79 -10.1 -3.63627 | GTCTGACACCCCAAA GGGAGGA ATC CCCTCCC ATTCCCCTTCAGGTA glgB 4501951 - 4499768 - | glycogen branching enzyme TERM 4764 4502531 - 4502547 + G 70 -2.1 -4.87786 | GGTTATTGCCTATCT GCTGAGT AAA ACACCGC TTTTTATCCCCTTGA TERM 4765 4503737 - 4503717 - g 73 -5.3 -4.4874 | opp_overlap 4503717 CGTAAAAACCTAAAA CGCAGCCAC GAT GTGGTCACG TTAAGTGATGAGATT YPTB3788 4502457 - 4504154 + | hypothetical protein TERM 4766 4504195 - 4504232 + T 73 -8.6 -3.71848 | opp_overlap 4504197, overlap 4504197 AGAAAACTCTATAAA AAGTAATGCCAGAG TATAACCCAC CTCTGGCATTACTA TTATTCCTGACACAA TERM 4767 4504230 - 4504197 - T 100 -11.2 -4.90296 | opp_overlap 4504197 4504195 AAAACTCTATAAAAA GTAATGCCAGAG TATAACCCAC CTCTGGCATTAC TATTATTCCTGACAC TERM 4768 4504197 - 4504230 + T 83 -11.2 -3.44284 | opp_overlap 4504197, overlap 4504195 AAAACTCTATAAAAA GTAATGCCAGAG TATAACCCAC CTCTGGCATTAC TATTATTCCTGACAC YPTB3789 4521237 - 4504366 - | Ig-like domain-containing protein TERM 4769 4511496 - 4511531 + g 70 -9.7 -3.14051 | overlap 4511493 4511500 TGTTGGTAATGCTGC CTATGGTGGCGACCA CATTGC TGGTCCCCGCCACAG TATTGGTCAGGGTCG TERM 4770 4511929 - 4511908 - G 70 -8 -3.90291 | ATTGGCTGAACTAAA GACCACCG CAGCAC CGGTGATC GCATTGCCATTAGCA TERM 4771 4515992 - 4515975 - G 71 -10.5 -2.78505 | overlap 4515972 CAGAACTGAAGACCA CGGCCGC ACCG GCGACCG CATTGCCCTCGCTAT TERM 4772 4517153 - 4517136 - G 71 -10.5 -2.78505 | overlap 4517133 CAGAACTGAAGACCA CGGCCGC ACCG GCGACCG CATTGCCCTCGCTAT TERM 4773 4520187 - 4520173 - G 73 -7.8 -4.0031 | ATCCTTACCAAATAA GGCGAC TTC ATCGCC ACGGTATTTTTCATA TERM 4774 4521967 - 4521926 - R 87 -5 -5.45726 | gap 2, opp_overlap 4521932 4521934, overlap 4521934 TATATTCTAAAAAAA TCCT-AAA-ATTATTTTTAA CATC TTAAAAATAATATTTTAGGA TTAATGCCCGAAAAT TERM 4775 4521957 - 4521934 - R 74 -7 -4.35095 | opp_overlap 4521932 4521934, overlap 4521926 AAAAAAATCCTAAAA TTATTTTTAA CATC TTAAAAATAA TATTTTAGGATTAAT TERM 4776 4522485 - 4522466 - R 100 -10 -5.63645 | opp_overlap 4522464 4522459 4522466 TTAAAATATAAAAAA CCCTGACC ATAA GATCAGGG TGCTTTGTTGTTCCT asd 4523629 - 4522526 - | aspartate-semialdehyde dehydrogenase TERM 4777 4524003 - 4524019 + G 71 -2.9 -4.93968 | overlap 4524005 TGACTGAGATGATTG CGGCAAC TGT GTTGCTA TTTTTAATTATGGAT TERM 4778 4524005 - 4524017 + G 73 -7.7 -4.08682 | overlap 4524003 ACTGAGATGATTGCG GCAAC TGT GTTGC TATTTTTAATTATGG yhgN 4523987 - 4524580 + | dITP- and XTP- hydrolyzing protein TERM 4779 4524665 - 4524651 - T 80 -2.8 -5.47399 | opp_overlap 4524651 TCAACGTCAAAAAAA CCAATT CAA AATGGG TCTTTGACTGCTGAC TERM 4780 4524742 - 4524755 + T 79 -8.1 -4.3534 | opp_overlap 4524736 TGTCAATAACCTCAA GCCTC TTCT GAGGC TTTTAATAATTAGAC YPTB3792 4525154 - 4524765 - | hypothetical protein YPTB3793 4525652 - 4525260 - | hypothetical protein YPTB3794 4526148 - 4525759 - | hypothetical protein YPTB3795 4527395 - 4526145 - | hypothetical protein YPTB3796 4528233 - 4527730 - | putative gluconokinase gntT 4528450 - 4529766 + | indonate/gluconate permease gntR 4530853 - 4529858 - | gluconate utilization system Gnt-I transcriptional repressor TERM 4781 4530904 - 4530927 + r 100 -8.2 -4.87291 | gap 1, opp_overlap 4530899 4530904 TTCTAGCAAAGAAAA GGGTATAGCGC GAT GTGC-ATACCC TTTTTAGTTAACGTA TERM 4782 4530927 - 4530904 - R 82 -6 -4.93877 | gap 1, opp_overlap 4530904, overlap 4530899 TTCTAGCAAAGAAAA GGGTATAGCGC GAT GTGC-ATACCC TTTTTAGTTAACGTA YPTB3799 4531656 - 4530961 - | hypothetical protein TERM 4783 4531896 - 4531880 - H 100 -9.4 -5.91981 | AAAAGGCAAAAAAAA GCCAGC ACCCG GCTGGC TAAGTAAACACTGGA YPTB3800 4532150 - 4532419 + | hypothetical protein YPTB3801 4532419 - 4533138 + | putative response regulator protein YPTB3802 4534220 - 4533213 - | PfkB family carbohydrate kinase TERM 4784 4533745 - 4533728 - G 81 -12.7 -2.62933 | overlap 4533716 CAAGCTGCGACATCA GCGCCAG TAGT CTGGCGC TACGAGTACCGTACT YPTB3803 4535090 - 4534230 - | hypothetical protein YPTB3804 4535799 - 4535116 - | hypothetical protein YPTB3805 4536818 - 4535874 - | ABC transporter, periplasmic ribose binding protein YPTB3806 4537841 - 4536849 - | ABC ribose transporter, permease subunit TERM 4785 4537799 - 4537774 - G 76 -9.9 -3.72695 | opp_overlap 4537793, overlap 4537785 ACGGTTTGCAGTAAA TCGCTAAAAAA CGCT TTTTTCAGCGA GGCAGATTTTGCCAC TERM 4786 4537798 - 4537785 - G 77 -3.8 -5.07107 | opp_overlap 4537793, overlap 4537774 TAAATCGCTAAAAAA CGCT TTTTTC AGCG AGGCAGATTTTGCCA YPTB3807 4539357 - 4537834 - | ribose ABC transporter ATPase YPTB3808 4539546 - 4542101 + | putative hybrid two-component system regulatory protein YPTB3809 4543433 - 4542237 - | hypothetical protein TERM 4787 4543132 - 4543144 + g 75 -3.3 -5.14563 | opp_overlap 4543133, overlap 4543133 GAATCATCACAAAAA AGCTG CCC CAGCG TTTTTTCATGCCAGG TERM 4788 4543143 - 4543133 - G 91 -6.8 -5.33785 | opp_overlap 4543133 4543132 AATCATCACAAAAAA GCTG CCC CAGC GTTTTTTCATGCCAG pitA 4543744 - 4545240 + | inorganic phosphate transporter TERM 4789 4545356 - 4545336 - T 100 -8.9 -5.15167 | opp_overlap 4545336 GATGAGCAATAAAAA GGCGGCCTA AAT CAGGTCGCC TTTTTTAATTCTTTT TERM 4790 4545336 - 4545356 + T 100 -10.4 -5.43514 | opp_overlap 4545336 GATGAGCAATAAAAA GGCGGCCT AAATC AGGTCGCC TTTTTTAATTCTTTT uspB 4545722 - 4545387 - | universal stress protein UspB uspA 4546447 - 4546893 + | universal stress protein A TERM 4791 4546941 - 4546921 - f 78 -9.6 -3.6715 | opp_overlap 4546921 TTAGGTAACGCTAAA CGCTCGCC TCTCC GGCGGGCG TTTTTGTGATAGACG TERM 4792 4546921 - 4546941 + F 100 -11.8 -4.91109 | opp_overlap 4546921 TTAGGTAACGCTAAA CGCTCGCC TCTCC GGCGGGCG TTTTTGTGATAGACG TERM 4793 4546981 - 4546999 + F 76 -2.5 -5.252 | gap 1, overlap 4546985 CCCTCCTCGTTACCC TCAATCTG AATC CAGAT-GA TTTTTTGTCAAAATC TERM 4794 4547706 - 4547694 - g 73 -4.9 -4.77036 | TGGCATGATGAAAAA GTTAT CCA ATAAC ACCGCTTGCGTCTTT gdhA 4547140 - 4548483 + | glutamate dehydrogenase YPTB3814 4548727 - 4550064 + | metalloprotease TERM 4795 4550139 - 4550124 - T 70 -6 -4.37092 | overlap 4550125 ATTCGGGTGAGAAAA TGCCGC TAAC GCGGCG GCGTCACCGATGAAG TERM 4796 4550138 - 4550125 - T 72 -9.5 -3.21934 | overlap 4550124 TTCGGGTGAGAAAAT GCCGC TAAC GCGGC GGCGTCACCGATGAA YPTB3815 4550899 - 4550129 - | putative methyltransferase TERM 4797 4550846 - 4550863 + g 88 -14.1 -2.74012 | opp_overlap 4550846 AGCCAGAATAGATAA GGCGCCG GGAT CGGCGCC TGCTTCAGATAATAA TERM 4798 4550863 - 4550846 - G 95 -14.1 -3.7319 | opp_overlap 4550846 AGCCAGAATAGATAA GGCGCCG GGAT CGGCGCC TGCTTCAGATAATAA opdA 4552945 - 4550903 - | oligopeptidase A TERM 4799 4553795 - 4553785 - g 73 -5.4 -4.58773 | CGTATGAAATGAAAA CTGA TTA TCAG GATGTGGTGAAAGGT YPTB3817 4553274 - 4554116 + | hypothetical protein TERM 4800 4555004 - 4554994 - g 73 -4.6 -4.7254 | overlap 4554980 4554995 4554996 AGCGGTTATCAAAAA CGCC GAT GGCA GCCTGACGCTGCAAT TERM 4801 4555230 - 4555242 + G 82 -10.5 -3.86524 | overlap 4555241 CCCCGGTTGCCGTTG CGGCG GGC CGCCG TTTGTCCGAACGTCT gor 4554269 - 4555636 + | glutathione reductase TERM 4802 4555646 - 4555683 + F 95 -11.3 -3.89346 | gap 1, opp_overlap 4555637, overlap 4555648 AGATGATTTCGTTAC TATGGCCCGAACAGGCAG AGA CT-CCTGCACGGGCCATG TTTCTGAAATAAACA TERM 4803 4555648 - 4555681 + F 89 -11.7 -3.53733 | gap 1, opp_overlap 4555637, overlap 4555646 ATGATTTCGTTACTA TGGCCCGAACAGGCAG AGA CT-CCTGCACGGGCCA TGTTTCTGAAATAAA TERM 4804 4556595 - 4556610 + G 72 -6 -4.36262 | opp_overlap 4556589, overlap 4556594 TGCGCAAATTGTATG CGCTGC TACA GCCGCG TTTTAGTCTGAATAT YPTB3819 4555907 - 4557034 + | putative regulatory protein YPTB3820 4557212 - 4558480 + | GntP family symporter glxK 4558491 - 4559627 + | putative glycerate kinase TERM 4805 4559763 - 4559732 - T 70 -7.2 -3.74872 | opp_overlap 4559730 4559759, overlap 4559734 AGGGACTTTATCAAA TACCGACGGTCAGA TATC TCTGGCCGTTGGGA CATCCTATTTTCCAC TERM 4806 4559761 - 4559734 - T 78 -9.8 -3.4582 | opp_overlap 4559730 4559759, overlap 4559732 GGACTTTATCAAATA CCGACGGTCAGA TATC TCTGGCCGTTGG GACATCCTATTTTCC YPTB3822 4560373 - 4559873 - | hypothetical protein YPTB3823 4561244 - 4560360 - | hypothetical protein TERM 4807 4561319 - 4561295 - R 100 -12.1 -3.80625 | CCGTCATAACGCAAA GCGGCATCCAG TAA CAAGATGCCGC CCCAAATCATTATCA yapE 4564544 - 4561332 - | pertactin family virulence factor/autotransporter TERM 4808 4562021 - 4562031 + g 77 -6.8 -4.63527 | opp_overlap 4562005, overlap 4562005 4562004 CGCCAGTCACTTGAG TGCC TGC GGCA TTTTTGGCCTGATAG TERM 4809 4563411 - 4563423 + g 74 -2.7 -5.0538 | GTTATTCCCTTGGGT TATCA CCG TGGTA TTTTTTACGATAGCG TERM 4810 4565328 - 4565312 - g 82 -5.1 -5.08011 | AAAACCGGCAAAAAA GCCATCT CTC ATATGGC CCGCCTCAGTGATCG TERM 4811 4565602 - 4565587 - g 75 -5.4 -4.7173 | overlap 4565589 CACCACACTTAAAAA TACGGT GAAT ACCGCA ATCCAGCAACGCACC TERM 4812 4566004 - 4565993 - g 81 -3.6 -5.4756 | AAGCCGAAGAAAAAA GCGC TGTT ACGC GGAGCCCTCATTGCC YPTB3825 4565222 - 4566304 + | hypothetical protein TERM 4813 4566984 - 4566996 + G 79 -3.3 -5.1861 | opp_overlap 4566955 TGGCAATAACCGCAC TGCCC CCT GGGGA TTTTTTACTGCTGGC TERM 4814 4567042 - 4567019 - g 70 -8.1 -3.85698 | CTGCTGGCCGACAAA GCGAACCTG ATGACG CAGGATCGC GCCTCAGCAGAGGAG cdh 4566308 - 4567105 + | CDP-diacylglycerol pyrophosphatase YPTB3827 4569323 - 4567110 - | hypothetical protein TERM 4815 4569617 - 4569602 - R 80 -9 -3.98159 | CAGGAGAAGATGAAA GGCGAT CATT ATCGCC TTAGGGAGCGTTAGC YPTB3828 4570473 - 4569628 - | EAL domain-containing protein YPTB3829 4570557 - 4570892 + | tautomerase enzyme TERM 4816 4570965 - 4570947 - f 79 -3.2 -5.34555 | opp_overlap 4570948, overlap 4570940 4570948 TTACATCATAAAAAA TTTAAAAC ACC GTTTTAAT CCTATTGACTCTGGA kdgK 4571171 - 4572115 + | 2-dehydro-3-deoxygluconokinase TERM 4817 4572202 - 4572147 - T 86 -11.3 -3.38991 | gap 1, opp_overlap 4572155 4572201, overlap 4572145 AGGCCGCGAATAACA GACGTTAA-TGACCGATCGTTGCAGG ATAAA CCTACAGCCATCGGTCATTTTACGCC TGGCTAACGTGGCCT TERM 4818 4572155 - 4572193 + T 100 -12.5 -4.11692 | opp_overlap 4572147 4572145 AATAACAGACGTTAA TGACCGATCGTTGCAGG ATAAA CCTACAGCCATCGGTCA TTTTACGCCTGGCTA YPTB3831 4573778 - 4572279 - | insulinase family protease TERM 4819 4572617 - 4572639 + g 88 -7 -5.05601 | TACGCGCATAGGTGG CGAACAACTT ACT GAGTTGGTCG TTTTTCTGTGTCATC TERM 4820 4573253 - 4573222 - G 76 -8.6 -4.00042 | opp_overlap 4573225, overlap 4573225 TGGCCGATTAAAGAA GAACCTTTGAGGCG ATAA CGCCACCACGGTTC CTGAATATTTTGTGG TERM 4821 4573555 - 4573543 - G 74 -9.1 -3.77464 | opp_overlap 4573542 4573536 4573534 AGACGAGGCAGTAAA TGGGC AAA GCCCA CTTCCTGTGTATTTT TERM 4822 4574100 - 4574070 - R 100 -17.7 -2.9294 | overlap 4574088 GACATTATGCAGAGA CGCTACCAGTGAC AGCAA GCCACTGGTAGCG AATTGAAGGGAGAAA dctA 4575432 - 4574143 - | C4-dicarboxylate transporter DctA YPTB3833 4576410 - 4575904 - | hypothetical protein pelY 4578226 - 4576508 - | periplasmic pectate lyase precursor TERM 4823 4578423 - 4578400 - R 72 -9.5 -3.14344 | opp_overlap 4578400 4578413 4578418 GACTCGGCCCATCAA GGGGCCTCG CCTCTT CGAGGCCGC AGCAAGCAGCCTTCC YPTB3835 4579176 - 4578472 - | KdgM family oligogalacturonate specific porin yhjK 4582003 - 4579817 - | biofilm formation regulator HmsP YPTB3837 4583261 - 4582146 - | endo-1,4-D-glucanase dppF 4584455 - 4583379 - | dipeptide transporter ATP-binding subunit dppD 4585432 - 4584452 - | dipeptide transporter ATP-binding subunit dppC 4586348 - 4585446 - | dipeptide transporter dppB 4587378 - 4586359 - | dipeptide transporter permease DppB TERM 4824 4587402 - 4587427 + r 75 -8.9 -3.64487 | opp_overlap 4587401 4587402 CTCTCTGTGTAGAAT GCCGGGCTGCT CATA GGCAACCTGGC TTATTAAACCTCTCC TERM 4825 4587646 - 4587613 - R 73 -5.9 -4.50159 | overlap 4587615 TTTAACCTAAATAAA TAGACCGATGAACGT TGAT ACGCACACCGGTCCG GTATAAGGGTAAAAT TERM 4826 4587644 - 4587615 - R 88 -10.7 -3.8535 | overlap 4587613 TAACCTAAATAAATA GACCGATGAACGT TGAT ACGCACACCGGTC CGGTATAAGGGTAAA dppA 4589268 - 4587661 - | ABC transporter, periplasmic dipeptide binding protein YPTB3843 4591700 - 4589937 - | TPS family hemolysin activator/secretion protein TERM 4827 4591773 - 4591752 - R 70 -3.7 -4.90918 | overlap 4591747 ACAAAATCAATAAAA GTTAGCCAC GAAA GCAACTAAC TTTAAATAAAAAATC YPTB3844 4593200 - 4591809 - | hemagglutinin/hemolysin-related protein TERM 4828 4593501 - 4593482 - R 100 -13.6 -5.63504 | opp_overlap 4593482 AATGGCACAAAAAAA CCCTGACG TTAC CGTCAGGG TTCTTAAATTTGGTC TERM 4829 4593482 - 4593501 + r 100 -13.6 -3.78904 | opp_overlap 4593482 AATGGCACAAAAAAA CCCTGACG TTAC CGTCAGGG TTCTTAAATTTGGTC TERM 4830 4593679 - 4593643 - R 70 -8.1 -3.62775 | gap 1, opp_overlap 4593646, overlap 4593644 4593669 ATCACTTTTTAATAA CCTGCGGATGACTGCT GTTAAA AGCA-TCACCCGCAGT GAAAATGGCCGCCTT TERM 4831 4593678 - 4593644 - R 81 -11.6 -2.77344 | gap 1, opp_overlap 4593646, overlap 4593643 4593669 TCACTTTTTAATAAC CTGCGGATGACTGCT GTTAAA AGCA-TCACCCGCAG TGAAAATGGCCGCCT uhpC 4595036 - 4593705 - | regulatory protein UhpC TERM 4832 4593908 - 4593888 - G 71 -6.7 -4.21351 | opp_overlap 4593891 AAATAGCCCAACAAA GCCGGTTGC AGC GCCAGCGGC ATCCTTATGAGAGCA uhpB 4596660 - 4595131 - | sensory histidine kinase UhpB TERM 4833 4596244 - 4596229 - G 71 -8.2 -3.69338 | opp_overlap 4596233, overlap 4596220 4596232 AACCAACCCTAATAA GAGCGC CATT GCGCCC TGCCCACTGGCTATC uhpA 4597247 - 4596657 - | two-component system response regulator TERM 4834 4597356 - 4597328 - R 74 -4.6 -4.81551 | gap 1, overlap 4597329 4597330 GAGGCACATCAAAAA TTGGGCCAGACTT GGGT AAGCCTGGCC-AG TTACGGCTAAATTGC TERM 4835 4597355 - 4597330 - R 71 -9.7 -2.68202 | overlap 4597329 4597328 GGCACATCAAAAATT GGGCCAGACTT GGGT AAGCCTGGCCA GTTACGGCTAAATTG yhjW 4599054 - 4597363 - | phosphoethanolamine transferase TERM 4836 4599475 - 4599450 - R 100 -10.3 -4.46656 | overlap 4599451 4599452 GGCAGAAGAGTAAAA TGCCCGCGCCA GAGA TGGCGCGGGTC GAGCTCCCAAGGAAG TERM 4837 4599474 - 4599451 - R 100 -13.8 -3.27271 | overlap 4599450 4599452 GCAGAAGAGTAAAAT GCCCGCGCCA GAGA TGGCGCGGGT CGAGCTCCCAAGGAA TERM 4838 4599473 - 4599452 - R 100 -17.3 -2.5564 | overlap 4599451 4599450 CAGAAGAGTAAAATG CCCGCGCCA GAGA TGGCGCGGG TCGAGCTCCCAAGGA TERM 4839 4599556 - 4599567 + r 82 -5.8 -5.00616 | overlap 4599552 GTCGCGAGCACGTTG CCAG CAGC CTGG TTTTTTGCAGGCAAA YPTB3849 4601046 - 4599583 - | hypothetical protein TERM 4840 4600836 - 4600853 + g 73 -2.1 -5.00895 | gap 1, overlap 4600836 4600837 TAATTCGGACTTCAT C-GAAAAT ATT ATTTTCAG TTTTTATGTAATCCG TERM 4841 4600965 - 4600985 + g 74 -9.1 -3.72324 | opp_overlap 4600964 GTGTATCGTAGATAC GTATTGCCA GTA TGGTAATAC TTATTACTACCAATA TERM 4842 4601510 - 4601480 - R 80 -4.6 -5.20328 | overlap 4601481 CTTGAAAAAAATAAA TCAGGCCGCTGATA CCC CATCAACCGCCCGT TAACATTCGTTCCCT TERM 4843 4601509 - 4601481 - R 70 -8.1 -3.7057 | overlap 4601480 TTGAAAAAAATAAAT CAGGCCGCTGATA CCC CATCAACCGCCCG TTAACATTCGTTCCC hutT 4602928 - 4601525 - | APC family histidine permease hutH 4604846 - 4603314 - | histidine ammonia-lyase hutU 4606534 - 4604843 - | urocanate hydratase TERM 4844 4605846 - 4605829 - G 71 -6.9 -4.20769 | opp_overlap 4605827 4605829 ACAGTGCAATAGAAA CCGCGAC ACCT GTAGCGG TATATTTCTCGATGC TERM 4845 4608093 - 4608076 - H 73 -7.1 -4.20696 | opp_overlap 4608078 GCATTAACGTTAAAA CACTAAT GAAA ATTAGTG TTAAACCTCATGGGG TERM 4846 4609123 - 4609106 - g 71 -2.7 -4.99043 | overlap 4609109 TCGGCATAAACAAAA TTATTGG GAAC CCAAAAA CAAAAGGGGCATAAC YPTB3855 4608208 - 4609137 + | hypothetical protein TERM 4847 4609640 - 4609650 + G 87 -6.8 -5.17054 | opp_overlap 4609630 CAAGATAAGCAGAGT GCGT ATC ACGC TTTTTTGGCTATTCT TERM 4848 4609935 - 4609924 - g 78 -5.8 -4.72272 | opp_overlap 4609928, overlap 4609925 TCTGGGGATCAAAAA TGGC CCTA GCCA TGCGGAGGTGATGAT YPTB3856 4609139 - 4610383 + | hypothetical protein YPTB3857 4610906 - 4611859 + | ABC transporter, periplasmic iron siderophore (ferrichrome) binding protein YPTB3858 4611869 - 4612828 + | ABC iron siderophore transporter, permease subunit TERM 4849 4612912 - 4612932 + G 83 -9.7 -4.25256 | overlap 4612909 TATTGCTACTGAGCA TCATCGCTC TCG GTGCGATGA TTATTTTCATGACAA YPTB3859 4612818 - 4613825 + | ABC iron siderophore transporter, permease subunit YPTB3860 4613822 - 4614580 + | ABC iron siderophore transporter, ATP-binding subunit YPTB3862 4615345 - 4615019 - | putative DNA-binding protein (partial remnant) YPTB3863 4615775 - 4615368 - | hypothetical protein TERM 4850 4615959 - 4615974 + r 100 -9 -4.81249 | opp_overlap 4615959 TTATTAATCTTTAAA GGCATC GCAC GATGCC TTTTTACATTTAGGG TERM 4851 4615974 - 4615959 - R 75 -9 -3.61764 | opp_overlap 4615959 TTATTAATCTTTAAA GGCATC GCAC GATGCC TTTTTACATTTAGGG YPTB3864 4616282 - 4616010 - | putative phage integrase (partial) YPTB3865 4617502 - 4616645 - | hypothetical protein ypjF 4618190 - 4617726 - | hypothetical protein yagB 4618482 - 4618147 - | hypothetical protein yfjY 4618973 - 4618494 - | hypothetical protein TERM 4852 4618661 - 4618691 + g 71 -8.2 -3.63968 | opp_overlap 4618661, overlap 4618648 GGCAATGCGCCAGAA GCACCGCTGCAGCA TTG TGTTGCAGTGCCGC TTTCACGATTTCGCG TERM 4853 4619117 - 4619093 - R 95 -7.8 -5.0916 | TCCTTAATACAAAAA GCCCCATCGC GATCA GCGACAGAGC TCGAAGTGAGTAGTA YPTB3869 4619776 - 4619156 - | hypothetical protein YPTB3870 4620358 - 4619804 - | hypothetical protein TERM 4854 4620116 - 4620095 - G 79 -10.1 -3.64487 | CCATACCTGTAACAA GCGCCAGAG CTTC CCCTGACGC TCGTCACGTTGACGG TERM 4855 4620586 - 4620552 - R 79 -7.8 -4.38114 | overlap 4620548 4620554 AAAACCTATAACAAA CTTGTGTTCGATCGGC GAA ACAGATCGAACGCATG ACAGGTTTCTAGACA YPTB3871 4621238 - 4620606 - | hypothetical protein YPTB3872 4621615 - 4621286 - | putative IS100 transposase yagK 4622244 - 4622864 + | hypothetical protein TERM 4856 4623034 - 4623011 - f 93 -8.8 -4.41616 | opp_overlap 4623027, overlap 4623013 ATCTTTCCAAACAAA TAGCCGGAGC TGTC ACTCCGGCTC GGATTCACTCATTAC TERM 4857 4623032 - 4623013 - f 95 -11.4 -3.81557 | opp_overlap 4623027, overlap 4623011 CTTTCCAAACAAATA GCCGGAGC TGTC ACTCCGGC TCGGATTCACTCATT TERM 4858 4623727 - 4623745 + F 100 -13.2 -4.01078 | CCAGGGGGTAATCTG CTCTCCTG ATT CAGGAGAG TTTATGGTCACTTTT TERM 4859 4623798 - 4623783 - g 71 -4.6 -4.56914 | overlap 4623784 TTATGGAAATTAAAA TCCTGC ACAA GCAGGG AATGAGTAGCCGGGC YPTB3875 4623749 - 4624771 + | putative transposase TERM 4860 4624852 - 4624838 - g 82 -11.4 -3.3506 | overlap 4624829 TGGAAAGCCTTATAA GCGCAG CGC CTGCGC TGTCACAACAGGCAG YPTB3876 4624771 - 4625550 + | transposase/IS protein YPTB3878 4626793 - 4626056 - | putative metal-dependent hydrolase YPTB3879 4630075 - 4626797 - | type I restriction enzyme restriction subunit TERM 4861 4628317 - 4628327 + g 73 -5.4 -4.57569 | opp_overlap 4628317 GTTGCCCCTTCAAAC CATC ATC GATG TTTTTGACAAAATGG TERM 4862 4630016 - 4630037 + g 71 -10.1 -2.77701 | opp_overlap 4630002 4630014 4630012, overlap 4630012 4630018 ATTGCTCAAGAGAGC CAGCGCCGG GAGC TTGGCGCTG TACTCTTCCTGGAAT YPTB3880 4631118 - 4630072 - | hypothetical protein TERM 4863 4630887 - 4630907 + g 93 -14.1 -3.36823 | opp_overlap 4630890, overlap 4630882 TTCCTTCCTGGCGAA CTATCCGGA ATT TCCGGATAG TTGAATTTTGACCAA TERM 4864 4631090 - 4631071 - G 71 -9.3 -3.53091 | opp_overlap 4631070, overlap 4631081 ATCCTCGCTTTGAAA CAGCAGG AATTCA CCTGCTG GTGGTTGAGGTAAGT YPTB3881 4632344 - 4631115 - | restriction modification enzyme TERM 4865 4631467 - 4631455 - G 71 -6.3 -4.30576 | opp_overlap 4631455 TCTGTACTACCAAAA CCAAT ACC ATTGG TTAAATTAATTACAT hsdM 4633857 - 4632334 - | putative type I site-specific deoxyribonuclease LldI chain hs... YPTB3883 4634442 - 4633864 - | hypothetical protein MJL12.14 4634660 - 4635574 + | hypothetical protein YPTB3885 4636101 - 4635877 - | putative (AJ250469) putative SinR-like protein [Clostri... TERM 4866 4636165 - 4636142 - R 79 -11 -3.05384 | opp_overlap 4636141 TTGGGTTTGAGTCAA CGCGACAGGC TGCA ACCTGTCGCA CCTTCATCACTAATC YPTB3886 4637633 - 4636419 - | putative integrase TERM 4867 4637595 - 4637605 + g 77 -8.2 -4.21098 | GTAAGCCTTATCTAT CGGC TTA GCCG TTTTCACCTTAATGT YPTB3887 4639295 - 4638102 - | AraC family transcriptional regulator TERM 4868 4639366 - 4639347 - R 82 -5.7 -4.91459 | opp_overlap 4639347 GAACAGGCAGAAAAA TCAGCGC GGTATG GCACTGA TTTTCCTATGGGATA xylH 4640569 - 4639385 - | xylose ABC transporter permease TERM 4869 4640282 - 4640269 - G 74 -3.8 -4.84527 | overlap 4640270 GCCAGACATCAAAAA TGGC CGCTAT GCCA CCCAATAACCCCATC xylG 4642088 - 4640556 - | xylose transporter ATP-binding subunit TERM 4870 4641777 - 4641760 - G 79 -10.5 -3.727 | overlap 4641749 4641754 TCCATGATACCGAAA CGGCCCC ATTC GGAGCCG AGGAACATGTTCTCC xylF 4643291 - 4642296 - | D-xylose transporter subunit XylF TERM 4871 4643433 - 4643448 + H 70 -2.6 -4.95484 | overlap 4643435 GTTTAATGTTAATTT TATGAT AACG ATCATG TTTTCTTTCCTCATA TERM 4872 4643737 - 4643727 - H 74 -6.8 -4.2717 | opp_overlap 4643715 ACCAGCCCAGCAAAA GCAG GGC CTGC TTCCAAGGAGTATTG TERM 4873 4644431 - 4644421 - g 70 -2.4 -4.88684 | opp_overlap 4644422 4644424, overlap 4644422 AACATAAACACAAAA CGGG TTT CCAG GGGACACTCCTTATT xylA 4643754 - 4645073 + | xylose isomerase TERM 4874 4645464 - 4645498 + G 75 -5.7 -4.59773 | gap 1, opp_overlap 4645452 4645460 AAACAACATCAGGTG CTGCGCCCCGCCATTT TATG GAATGACGGC-CGCAG TTTTTCCCAGTGCCA TERM 4875 4646180 - 4646155 - g 83 -4.6 -5.28176 | opp_overlap 4646155 CTGAGGTAGAAAAAA CCCCAATGGC TGCAAC GCCAGTGTGG TTCCTACCCTATCTT xylB 4645197 - 4646651 + | xylulose kinase TERM 4876 4646675 - 4646705 + T 100 -9.1 -4.82901 | opp_overlap 4646675 4646674 4646672, overlap 4646676 AGTGCGAATAAACAC CGTGCTGGGTAAT TCATT ATTACTCAGCACA TTTTTATAGGGCCAC TERM 4877 4646676 - 4646704 + T 100 -12.6 -3.49419 | opp_overlap 4646675 4646674 4646672, overlap 4646675 GTGCGAATAAACACC GTGCTGGGTAAT TCATT ATTACTCAGCAC ATTTTTATAGGGCCA YPTB3893 4647717 - 4646731 - | hypothetical protein YPTB3894 4648523 - 4647756 - | putative fimbrial chaperone TERM 4878 4647874 - 4647852 - G 75 -11.4 -2.69717 | overlap 4647851 4647847 ATCCATATAACCAAC GTTATAACGG CTA CCGCTATAAC CCGGCGTTTTAACAA yqiG 4651114 - 4648616 - | outer membrane fimbrial usher porin TERM 4879 4649168 - 4649180 + g 77 -6.3 -4.5448 | CCAGTTGGTATTGAT TGAGT TGT ACTCA TTATTTTTATGGCTA TERM 4880 4651072 - 4651086 + g 95 -2.1 -6.34616 | TTGTTAATACTTTCA CCATT AGGAA GATGG TTTTTTTTCTTTTAG TERM 4881 4651144 - 4651177 + r 93 -11.9 -3.66497 | opp_overlap 4651145 4651148, overlap 4651136 4651145 4651148 4651153 CTTATGGCGATAATA TTAATTAGAGGGGAG TTAC CTCCCCTTTAATTAC TTTAAACATTTGTTA TERM 4882 4651145 - 4651176 + r 100 -15.4 -2.79175 | opp_overlap 4651145 4651148, overlap 4651144 4651136 4651148 4651153 TTATGGCGATAATAT TAATTAGAGGGGAG TTAC CTCCCCTTTAATTA CTTTAAACATTTGTT TERM 4883 4651176 - 4651145 - R 90 -13.2 -2.53271 | opp_overlap 4651144 4651136 4651145 4651148 4651153, overlap 4651148 TTATGGCGATAATAT TAATTAGAGGGGAG TTAC CTCCCCTTTAATTA CTTTAAACATTTGTT TERM 4884 4651173 - 4651148 - R 80 -10.5 -3.41745 | opp_overlap 4651145 4651144 4651136 4651148 4651153, overlap 4651145 TGGCGATAATATTAA TTAGAGGGGAG TTAC CTCCCCTTTAA TTACTTTAAACATTT TERM 4885 4651148 - 4651173 + r 100 -12.7 -3.5332 | opp_overlap 4651148 4651145, overlap 4651145 4651144 4651136 4651153 TGGCGATAATATTAA TTAGAGGGGAG TTAC CTCCCCTTTAA TTACTTTAAACATTT TERM 4886 4651153 - 4651168 + r 89 -10.4 -4.04394 | opp_overlap 4651148 4651145, overlap 4651148 4651145 4651144 4651136 ATAATATTAATTAGA GGGGAG TTAC CTCCCC TTTAATTACTTTAAA YPTB3896 4651747 - 4651190 - | fimbrial protein TERM 4887 4652428 - 4652455 + r 75 -3.4 -5.24129 | opp_overlap 4652428 TTTAACACAATCCAA GCCACTGAGA ATAAACCC TCTCGGTAGC TTTTTTATAAACCAA TERM 4888 4652499 - 4652480 - R 85 -4.4 -5.50925 | opp_overlap 4652496 AACCAAGATAAAAAA TAACTTTA GCAT TAAAGTCA GTGTCGTATATTGGC YPTB3897 4653621 - 4652629 - | hypothetical protein TERM 4889 4653200 - 4653210 + g 71 -8.2 -3.67976 | ATTGCCAGATAGCGG CCCG AAA CGGG TTTAACCTTAATAAG TERM 4890 4653981 - 4653925 - g 75 -10.3 -3.30159 | gap 1, opp_overlap 4653930 4653935 4653940, overlap 4653926 4653935 CCAATGGGGCCATAA GTGCACTGAACC-CCAGATCTTGGAT CTTTTT ATCCATGATCTGGAGGTTCGGTTCAA TGAAACACCCTTTTT TERM 4891 4653980 - 4653926 - g 84 -13.8 -2.57881 | gap 1, opp_overlap 4653930 4653935 4653940, overlap 4653925 4653935 CAATGGGGCCATAAG TGCACTGAACC-CCAGATCTTGGAT CTTTTT ATCCATGATCTGGAGGTTCGGTTCA ATGAAACACCCTTTT TERM 4892 4653930 - 4653976 + G 100 -15.4 -3.05384 | gap 1, opp_overlap 4653926 4653925 4653935, overlap 4653935 4653940 GGGGCCATAAGTGCA CTGAACC-CCAGATCTTGGAT CTTTTT ATCCATGATCTGGAGGTTCGG TTCAATGAAACACCC TERM 4893 4653935 - 4653971 + G 73 -10.3 -3.19192 | gap 1, opp_overlap 4653935 4653926 4653925, overlap 4653930 4653940 CATAAGTGCACTGAA CC-CCAGATCTTGGAT CTTTTT ATCCATGATCTGGAGG TTCGGTTCAATGAAA TERM 4894 4653970 - 4653935 - g 83 -12.7 -3.08471 | opp_overlap 4653930 4653935 4653940, overlap 4653926 4653925 CATAAGTGCACTGAA CCCCAGATCTTGGAT CTTTTT ATCCATGATCTGGAG GTTCGGTTCAATGAA TERM 4895 4653940 - 4653950 + G 78 -5.4 -4.88736 | opp_overlap 4653935 4653926 4653925, overlap 4653935 4653930 GTGCACTGAACCCCA GATC TTG GATC TTTTTATCCATGATC YPTB3898 4653852 - 4654496 + | IS1661 DNA-binding protein TERM 4896 4655316 - 4655298 - g 72 -11 -2.73735 | overlap 4655288 4655286 4655309 AAACAGGCGGAATGA GTCCGGCA GAA TACCGGAC TCAGGTAGAAAAGCA YPTB3899 4654550 - 4655335 + | IS1661 transposase YPTB3900 4656447 - 4655494 - | ornithine cyclodeaminase YPTB3901 4657403 - 4656441 - | hypothetical protein yidR 4657611 - 4658912 + | hypothetical protein YPTB3903 4659290 - 4658955 - | hypothetical protein TERM 4897 4659141 - 4659176 + g 72 -10.6 -3.05596 | gap 1, overlap 4659146 GGGGCGTAGTGCCCA GCCGGTATCGTCAT-CT TTG AGCATGGCGATATTGGC TTCGGTGCCAGAGTA TERM 4898 4659482 - 4659494 + H 77 -3.5 -5.23316 | opp_overlap 4659481 ATTTTCCAATACGAT TTTTT GCG AAAAA TTTTTTGATCTCATG ibpA 4659658 - 4660071 + | heat shock protein IbpA ibpB 4660352 - 4660816 + | heat shock chaperone IbpB TERM 4899 4660982 - 4661013 + F 100 -10.2 -4.41548 | overlap 4660984 TCCCTTGTTTGTCTT TTCACCGGAGAG ATTCCCCG CTCTCCGGTGCA TTTTGTGGCGTATCC TERM 4900 4660984 - 4661011 + F 90 -12.8 -2.54186 | overlap 4660982 CCTTGTTTGTCTTTT CACCGGAGAG ATTCCCCG CTCTCCGGTG CATTTTGTGGCGTAT yidE 4661189 - 4662847 + | hypothetical protein TERM 4901 4662875 - 4662899 + T 100 -12.9 -4.23674 | opp_overlap 4662873 4662872 CGGGCTATTAAACTT CAGGGCAGC GTAATTG GCTGCCCTG TTTGTATTGGTGAAG avtA 4664225 - 4662960 - | valine--pyruvate transaminase TERM 4902 4664390 - 4664380 - R 91 -5.4 -5.59502 | TAAAAAAGTAAAAAA CCAT GAA ATGG CAAGAGGAGAGAATT YPTB3908 4665124 - 4664681 - | hypothetical protein malS 4667592 - 4665529 - | periplasmic alpha-amylase precursor TERM 4903 4667653 - 4667687 + r 71 -4.2 -4.82901 | GGCAGATTCAGTGTG CCGCTTGGCGAAGA AATAGCC TCATCCCTGAGCGG TTTTTGTAGGGAGGA TERM 4904 4667879 - 4667846 - R 76 -9.7 -3.35597 | overlap 4667844 TTGACCTGCCAAACA TCTATTGACCCGC TAAACAGG GCAGGCCAATAGA ATTGACGGGCGGATG YPTB3910 4668880 - 4667900 - | 2-hydroxyacid dehydrogenase YPTB3911 4669417 - 4670061 + | hypothetical protein TERM 4905 4670106 - 4670134 + T 72 -7.6 -3.80133 | gap 2, opp_overlap 4670121, overlap 4670103 GAAAATGGGGAGCAG TGCGGATAA-G-CC AAA GGACATTATCCGCA TGTTTTATCACGGTG yiaD 4670851 - 4670192 - | putative outer membrane lipoprotein YPTB3913 4671665 - 4671210 - | hypothetical protein tag 4672234 - 4671662 - | DNA-3-methyladenine glycosylase TERM 4906 4672059 - 4672072 + g 73 -2.3 -5.00884 | overlap 4672070 TGATGGAAGCTTTTG CGGTA ATGC TCCCG TTTTTTGAGCACGGT glyQ 4672581 - 4673495 + | glycyl-tRNA synthetase subunit alpha TERM 4907 4675142 - 4675180 + G 75 -7.6 -4.25283 | gap 2, opp_overlap 4675141 TAGCGTCGATACCAT TCAGGCGGTATTGGCTCG TCGTC CGA-CCAA-ACCGGCTGA TTTTGATGCGCGAGT glyS 4673505 - 4675574 + | glycyl-tRNA synthetase subunit beta TERM 4908 4675623 - 4675605 - f 90 -11.7 -3.61398 | CGTGCTGGGCAATAA GGGGAGC TATAC GCTCCCC TTCAGACTGCTGACA TERM 4909 4675713 - 4675687 - f 84 -10.1 -3.82218 | gap 1, opp_overlap 4675696, overlap 4675688 4675703 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 4910 4675714 - 4675688 - f 72 -10.1 -2.88849 | gap 1, opp_overlap 4675696, overlap 4675687 4675703 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT TERM 4911 4675782 - 4675821 + F 85 -7.3 -4.87786 | gap 1, opp_overlap 4675787 4675788, overlap 4675784 4675788 4675793 CGCGGGCACTTTGTC AATAACCTCAAGGGGAGC TATAC GCTCCCCTT-ACGTTATG TTTTTGTGGGGTTAG TERM 4912 4675784 - 4675819 + F 86 -9.9 -4.05669 | gap 1, opp_overlap 4675787 4675788, overlap 4675782 4675788 4675793 CGGGCACTTTGTCAA TAACCTCAAGGGGAGC TATAC GCTCCCCTT-ACGTTA TGTTTTTGTGGGGTT TERM 4913 4675788 - 4675816 + F 83 -8.8 -4.13816 | opp_overlap 4675787 4675788, overlap 4675784 4675782 4675793 CACTTTGTCAATAAC CTCAAGGGGAGC TATAC GCTCCCCTTACG TTATGTTTTTGTGGG TERM 4914 4675816 - 4675788 - f 77 -11 -2.77013 | opp_overlap 4675788 4675784 4675782 4675793, overlap 4675787 CACTTTGTCAATAAC CTCAAGGGGAGC TATAC GCTCCCCTTACG TTATGTTTTTGTGGG TERM 4915 4675793 - 4675811 + F 86 -11.7 -3.33845 | opp_overlap 4675788 4675787, overlap 4675788 4675784 4675782 TGTCAATAACCTCAA GGGGAGC TATAC GCTCCCC TTACGTTATGTTTTT yiaF 4676041 - 4676766 + | hypothetical protein TERM 4916 4676890 - 4676864 - f 86 -10.1 -3.9749 | gap 1, opp_overlap 4676873, overlap 4676865 4676880 AGGCAGAAGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 4917 4676891 - 4676865 - f 73 -10.1 -2.97771 | gap 1, opp_overlap 4676873, overlap 4676864 4676880 GGCAGAAGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT TERM 4918 4676967 - 4676986 + F 100 -11.4 -4.44914 | opp_overlap 4676965 CTTTGTCAATAACCT CAGGGGCC TTTT GGTCCCTG TTATTTTCTTACATA TERM 4919 4677079 - 4677094 + F 74 -7.6 -4.07568 | opp_overlap 4677079 4677078 4677074 CGAGCAAAAATAACT TGTGAC AAAT GTCACA TTTTAAAAACAAACA TERM 4920 4677246 - 4677258 + F 72 -6.3 -4.26903 | GTTGTTTTGTGTGAC TTTCG TCA CGAAA TTTTCGTGAGCTACG TERM 4921 4677379 - 4677411 + F 71 -4.2 -4.89567 | AAAATAATTATATCG CGCTCTTATTGTTA GCGCG TACCAATAGGGGTG TTTTATGTTTTCACC mtlA 4677416 - 4679347 + | PTS system, mannitol-specific IIABC component mtlD 4679484 - 4680647 + | mannitol-1-phosphate 5-dehydrogenase mtlR 4680854 - 4681408 + | mannitol repressor protein TERM 4922 4681806 - 4681783 - g 83 -7.4 -4.66456 | gap 1, overlap 4681785 4681796 AAAGAAAAAGAGAAA CTGGCCGCTGA AAT TCAGC-GCCTG AAAGAAGTACGGGTA TERM 4923 4681838 - 4681827 - g 73 -2.2 -5.03715 | AGTACGGGTAAAAAA CCTG AGTG CAGA AGCTCAAAAACTGGC YPTB3921 4681657 - 4682013 + | hypothetical protein TERM 4924 4682017 - 4682005 - T 71 -3.3 -5.0538 | opp_overlap 4681995 GGCTACGCTAAAAAA GCGTT TTG ATCGC CGCTTTGCGGTAACC TERM 4925 4682032 - 4682059 + T 80 -10.5 -3.56375 | overlap 4682031 4682028 4682024 4682034 CCGCTTTGCGGTAAC CTCTGGGTGGC ATGGCC GCCACCCGGTG TGTTGTTCCTTTTGC TERM 4926 4682034 - 4682057 + T 86 -11.7 -3.33839 | overlap 4682032 4682031 4682028 4682024 GCTTTGCGGTAACCT CTGGGTGGC ATGGCC GCCACCCGG TGTGTTGTTCCTTTT YPTB3922 4682654 - 4682178 - | hypothetical protein YPTB3923 4683520 - 4683188 - | hypothetical protein TERM 4927 4683240 - 4683250 + g 74 -2.6 -5.06816 | TGTCTTTTTTTGTAT TTAA CGC TTAA TTTTTCTTGCAAACT TERM 4928 4683282 - 4683292 + g 100 -5.4 -6.15717 | CGTGCTTTGCTACAC GTGA CAT TCAC TTTTTTTTCTATTTC tar 4685659 - 4683710 - | methyl-accepting chemotaxis protein II TERM 4929 4685885 - 4685917 + r 76 -9.2 -3.50722 | opp_overlap 4685889, overlap 4685883 4685887 4685889 GAAACTTTAACAATA AAAATGCCAGCAAG AGGGC CTTGCTGGCATGTA TCTTTCGTACTTGAA TERM 4930 4685887 - 4685915 + r 89 -11.8 -3.32233 | opp_overlap 4685889, overlap 4685885 4685883 4685889 AACTTTAACAATAAA AATGCCAGCAAG AGGGC CTTGCTGGCATG TATCTTTCGTACTTG TERM 4931 4685889 - 4685913 + r 100 -14.4 -3.21671 | opp_overlap 4685889, overlap 4685887 4685885 4685883 CTTTAACAATAAAAA TGCCAGCAAG AGGGC CTTGCTGGCA TGTATCTTTCGTACT TERM 4932 4685913 - 4685889 - R 100 -15.1 -5.29445 | opp_overlap 4685889 4685887 4685885 4685883 CTTTAACAATAAAAA TGCCAGCAAGA GGG CCTTGCTGGCA TGTATCTTTCGTACT sodA 4686626 - 4686003 - | superoxide dismutase TERM 4933 4686187 - 4686209 + g 71 -8.4 -3.64184 | opp_overlap 4686204, overlap 4686188 4686204 AGCGGGCTGTCTTGG TTAGCGGTTG AAA CAACCGCCAG TTTGCCGTCGTCTTT TERM 4934 4686805 - 4686824 + r 71 -4.9 -4.7416 | overlap 4686808 ATAAAATTAATTTAT GATGCGG CGTAAC CCGCTTC TTTTTGACGTTTTAC TERM 4935 4686808 - 4686821 + r 70 -5.2 -4.45259 | overlap 4686805 AAATTAATTTATGAT GCGG CGTAAC CCGC TTCTTTTTGACGTTT TERM 4936 4687021 - 4687043 + r 95 -7.8 -5.22312 | overlap 4687033 TCGCCACTATCGTTA TATCTTTGGT GTC ACCAATGATA TTTTTTGGTGTGGAT fdhD 4687903 - 4687079 - | formate dehydrogenase accessory protein TERM 4937 4687392 - 4687429 + g 80 -9.1 -4.18018 | opp_overlap 4687379 4687378, overlap 4687394 ATCCACGCGGCAGCA TGGGTACAGCCGGTGAG TTGA CCGACCGGTTGTACCTG TTTTAGCTGGGCAAG TERM 4938 4687394 - 4687427 + g 85 -11.7 -3.69216 | opp_overlap 4687378, overlap 4687392 CCACGCGGCAGCATG GGTACAGCCGGTGAG TTGA CCGACCGGTTGTACC TGTTTTAGCTGGGCA TERM 4939 4689822 - 4689804 - g 71 -3 -4.96501 | overlap 4689805 4689806 4689808 CCGGATAAAAACAAA GTGACAGC GGC GCTGTCGA AGCTGAAATTCTTGG fdoG 4688100 - 4691147 + | formate dehydrogenase-O, major subunit (formate dehydrogenase... TERM 4940 4691816 - 4691795 - g 82 -11.6 -3.28712 | opp_overlap 4691780, overlap 4691779 4691780 CCGTGGGTTTGATAA CGCAGGGT TATATG ACCCTGCG GGCGTCGGCGGTACC fdoH 4691160 - 4692131 + | formate dehydrogenase-O, iron-sulfur subunit TERM 4941 4692172 - 4692143 - g 100 -7 -5.77571 | overlap 4692144 ATGAAAAAAGAAAAA CCGATCCAGCGC TACAGC GCGCCGGAGCGC ATTAACCACTGGATA TERM 4942 4692171 - 4692144 - g 85 -10.5 -4.02882 | overlap 4692143 TGAAAAAAGAAAAAC CGATCCAGCGC TACAGC GCGCCGGAGCG CATTAACCACTGGAT TERM 4943 4692283 - 4692328 + G 73 -4.7 -4.81734 | gap 2, overlap 4692283 4692292 4692295 TGGTACACCACAGAT GG-CGCGCAT-TCTTCACCCC TTTGCC GGGGTGGTGATGTTCGCGGCC TTTTTGATCATGTTT fdoI 4692128 - 4692802 + | formate dehydrogenase-O subunit gamma TERM 4944 4692856 - 4692883 + G 73 -7.6 -4.12942 | opp_overlap 4692844 4692857 4692860, overlap 4692860 CAACGCGAAAAAGGT ACAACGGCGGGG AATA TCCCGCCGTTAC TTTTCGCAAATTTAA TERM 4945 4692882 - 4692857 - g 81 -12.6 -2.85019 | opp_overlap 4692856 4692860, overlap 4692844 4692860 AACGCGAAAAAGGTA CAACGGCGGG GAATAT CCCGCCGTTA CTTTTCGCAAATTTA TERM 4946 4692879 - 4692860 - g 86 -12.1 -3.5616 | opp_overlap 4692860 4692856, overlap 4692857 4692844 GCGAAAAAGGTACAA CGGCGGG GAATAT CCCGCCG TTACTTTTCGCAAAT TERM 4947 4692860 - 4692879 + G 90 -12.8 -3.67175 | opp_overlap 4692857 4692844 4692860, overlap 4692856 GCGAAAAAGGTACAA CGGCGGGG AATA TCCCGCCG TTACTTTTCGCAAAT fdhE 4692802 - 4693731 + | formate dehydrogenase accessory protein FdhE selA 4693927 - 4695315 + | selenocysteine synthase selB 4695312 - 4697285 + | selenocysteinyl-tRNA-specific translation factor TERM 4948 4697567 - 4697555 - f 87 -6.3 -5.18726 | CCTCCAGAATAAAAA TTGAG TCC CTCAA GGTGCCCGGTACAAC YPTB3934 4698045 - 4698377 + | hypothetical protein TERM 4949 4698362 - 4698389 + T 78 -9.2 -3.62235 | opp_overlap 4698368, overlap 4698360 4698365 ATATAGATATCTTTC CAATAAGGAGGA ATGA TCCTCCTTGCTG TCTATTTTCTTTCAT TERM 4950 4698383 - 4698368 - T 75 -9 -3.62224 | opp_overlap 4698365 4698362 4698360 ATATCTTTCCAATAA GGAGGA ATGA TCCTCC TTGCTGTCTATTTTC YPTB3935 4698972 - 4698391 - | hypothetical protein TERM 4951 4699677 - 4699634 - R 73 -7.4 -4.08394 | overlap 4699637 ATAGCGTGGGTAAAA CTATCCTGCTGGAGAAGC TACCTGAC GCTCCTCCAGCAGGGAAT AAACTTACTCGGTAG TERM 4952 4699674 - 4699637 - R 100 -13.5 -3.08032 | overlap 4699634 GCGTGGGTAAAACTA TCCTGCTGGAGAAGC TACCTGAC GCTCCTCCAGCAGGG AATAAACTTACTCGG mdfA 4700911 - 4699682 - | major facilitator superfamily multidrug translocase TERM 4953 4701414 - 4701436 + r 75 -9 -3.59979 | CGATAGTGCGAAAGC GCGGGGTTCC AAG GGGGCCACGC TTTGCACTGAACCCC TERM 4954 4701489 - 4701507 + r 77 -11 -2.73735 | overlap 4701482 4701499 4701501 TGCTTTTCTACCTGA GTCCGGTA TTC TGCCGGAC TCATTCCGCCTGTTT YPTB3937 4702255 - 4701470 - | IS1661 transposase YPTB3938 4702953 - 4702309 - | IS1661 DNA-binding protein TERM 4955 4702875 - 4702829 - G 100 -15.4 -3.05384 | gap 1, opp_overlap 4702835, overlap 4702834 4702855 GGGTGTTTCATTGAA CCGAACCTCCAGATCATGGAT AAAAAG ATCCAAGATCTGG-GGTTCAG TGCAAAGCGTGGCCC TERM 4956 4702870 - 4702834 - G 73 -10.3 -3.19192 | gap 1, opp_overlap 4702835, overlap 4702829 4702855 TTTCATTGAACCGAA CCTCCAGATCATGGAT AAAAAG ATCCAAGATCTGG-GG TTCAGTGCAAAGCGT TERM 4957 4702835 - 4702870 + g 83 -12.7 -3.05463 | opp_overlap 4702834 4702829 4702855 TTCATTGAACCGAAC CTCCAGATCATGGAT AAAAAG ATCCAAGATCTGGGG TTCAGTGCAAAGCGT TERM 4958 4702865 - 4702855 - G 78 -5.4 -4.88736 | opp_overlap 4702835, overlap 4702834 4702829 GATCATGGATAAAAA GATC CAA GATC TGGGGTTCAGTGCAA TERM 4959 4702904 - 4702882 - G 71 -9 -3.59979 | GGGGTTCAGTGCAAA GCGTGGCCCC CTT GGAACCCCGC GCTTTCGCACTATCG YPTB3939 4704246 - 4703437 - | sugar phosphatase TERM 4960 4704425 - 4704398 - R 93 -4.1 -5.81412 | gap 1 TTCAGGCAAAAAAAA GCCCAGTGGCAG TTTTC CCACC-CTGGAC TTTTTTATCTGGCCA gyrB 4706876 - 4704462 - | DNA gyrase subunit B recF 4707981 - 4706896 - | recombination protein F TERM 4961 4707211 - 4707222 + g 71 -7.2 -4.03234 | ACCATCGGCCCGAAT GCGG AAAT CCGC TTTATGTGGCCCAAC TERM 4962 4707484 - 4707502 + g 80 -12.4 -2.7556 | opp_overlap 4707481, overlap 4707486 ATAGCGACTAACCTG GCGCAGCG CGG CGTTGCGC TGCTTGAGTAACCTT TERM 4963 4707486 - 4707505 + g 79 -11.4 -3.10082 | opp_overlap 4707481, overlap 4707484 AGCGACTAACCTGGC GCAGCGCG GCGT TGCGCTGC TTGAGTAACCTTTTT TERM 4964 4707602 - 4707581 - G 77 -4.3 -5.0538 | opp_overlap 4707580 CCCCAGTCTAAAAAA GCGCGCC GGAATTTT GGCCCGC CATTTAATAACGTAA dnaN 4709254 - 4708154 - | DNA polymerase III subunit beta dnaA 4710647 - 4709259 - | chromosomal replication initiation protein YPTB3944 4710771 - 4710980 + | hypothetical protein TERM 4965 4711321 - 4711335 + F 75 -7.2 -4.29139 | AGCAGCCAAACGCGT TTACTG AAT CAGTAA TTATTTTAAGTTTAG rpmH 4711363 - 4711503 + | 50S ribosomal protein L34 rnpA 4711522 - 4711881 + | ribonuclease P TERM 4966 4711883 - 4711919 + GF 100 -16.7 -3.14211 | CTCCCGCATCCTGAT CGGGCTGATTAGGGGCT ATC AGCTCGTAATCAGTCCG TTGCTGGGGCCGCGT YPTB3947 4711845 - 4712102 + | hypothetical protein TERM 4967 4712266 - 4712250 - g 71 -9.3 -3.6053 | overlap 4712246 CCGGTGATAAAGCAA GCCAGGC TGT GCCAGGC AGCGGTCAGGGTCAA TERM 4968 4713067 - 4713051 - g 80 -6.5 -4.79955 | AGATTCAGAATAAAA TGGCGGA AAT TGCGCCA CATCTGGACCTGACT TERM 4969 4713731 - 4713713 - g 75 -5.9 -4.56597 | CGTGGTCTGGAAAAA CGTGGCT TACAC AGCCGCG AGAAGAAAAAATAAC yidC 4712105 - 4713745 + | putative inner membrane protein translocase component YidC TERM 4970 4713770 - 4713794 + F 100 -15.1 -4.40561 | overlap 4713767 ATAATCATGAGTATT TAGGGCGGTCA ATA TGACCGCCTTA TTCTTTTTACAGAAG TERM 4971 4714625 - 4714647 + G 73 -7.7 -4.07568 | opp_overlap 4714625, overlap 4714627 GGCGATTGTAACGGA TATCGCGGG CACCA CCCGTGATG TTTTACGGGAACACA trmE 4713888 - 4715252 + | tRNA modification GTPase TrmE TERM 4972 4715484 - 4715471 - g 75 -5.9 -4.4891 | opp_overlap 4715466 4715471 CCCATGATTATAAAA CCACG TGTA CGCGG CTTTATCTGTGTGAC TERM 4973 4715656 - 4715672 + G 73 -3.6 -4.86731 | AGCATTTGGTTGTGG CGCCGA TACGC TGGGCG TTTTCTTTGAACGCC TERM 4974 4715793 - 4715778 - g 73 -5.4 -4.65895 | opp_overlap 4715778 GCTTGTACGCAAAAA GCATCA ACGG CGATGC GTTCTCTGATGAGAT YPTB3950 4715459 - 4716658 + | trans-2-enoyl-CoA reductase TERM 4975 4716672 - 4716716 + T 78 -9.3 -3.72592 | opp_overlap 4716681, overlap 4716674 4716681 AAGCTCCGGTTTATT GCTCAATAACCTGCTGCGTCA CTA TCACGCAGCAGGTTGATCATC TTCTTACTGGGGGTT TERM 4976 4716674 - 4716714 + T 80 -10.5 -3.44284 | opp_overlap 4716681, overlap 4716672 4716681 GCTCCGGTTTATTGC TCAATAACCTGCTGCGTCA CTA TCACGCAGCAGGTTGATCA TCTTCTTACTGGGGG TERM 4977 4716707 - 4716681 - T 100 -15.2 -3.62597 | opp_overlap 4716674 4716672 4716681 TTTATTGCTCAATAA CCTGCTGCGTCA CTA TCACGCAGCAGG TTGATCATCTTCTTA TERM 4978 4716681 - 4716707 + T 100 -15.2 -3.30452 | opp_overlap 4716681, overlap 4716674 4716672 TTTATTGCTCAATAA CCTGCTGCGTCA CTA TCACGCAGCAGG TTGATCATCTTCTTA YPTB3951 4717408 - 4717127 - | hypothetical protein YPTB3952 4718090 - 4717470 - | hypothetical protein yieG 4720020 - 4718635 - | xanthine/uracil permease family protein TERM 4979 4719068 - 4719053 - G 78 -6 -4.75219 | GAAGTACCAATAAAA GCACCG GCAA CGGAGC TGATACTGTCCACAT TERM 4980 4719423 - 4719398 - G 78 -6.1 -4.73677 | overlap 4719400 GCGATAATAAAGAAA CCCAGTGCACC CAAC AGTACACTGTG AGAGGTCAGATTACC TERM 4981 4720028 - 4720043 + H 75 -3.2 -5.19916 | AAAACCATTTGTTTA GAGCGT GATC ACACTC TTTTTTACCTCTTTT TERM 4982 4720274 - 4720248 - H 84 -10.1 -3.82218 | gap 1, opp_overlap 4720257, overlap 4720249 4720264 AGGCAGAGGAGTAAA GCGTCCGCGCCA AGGA TGGCGCGG-CTC GAGCCTACATGGATG TERM 4983 4720275 - 4720249 - H 72 -10.1 -2.88849 | gap 1, opp_overlap 4720257, overlap 4720248 4720264 GGCAGAGGAGTAAAG CG-TCCGCGCCA AGGA TGGCGCGGCTCG AGCCTACATGGATGT TERM 4984 4720986 - 4721001 + G 88 -8.2 -4.75472 | overlap 4720976 4720977 CCAGGCCGGGATTGC CGCCGG TATT CCGGTG TTTTATTACTGTGCC YPTB3954 4720456 - 4721124 + | 6-phosphogluconate phosphatase YPTB3955 4721914 - 4721159 - | ABC amino acid transporter, permease subunit TERM 4985 4721190 - 4721221 + g 82 -5.2 -5.15634 | gap 1, opp_overlap 4721192, overlap 4721195 GTTAGCTTGTTACAC CACCAGCGCCATG AACGTGC CATGGCGCTT-TG TTTTTTAATGGCATG TERM 4986 4721195 - 4721217 + g 100 -10.6 -5.0917 | opp_overlap 4721192, overlap 4721190 CTTGTTACACCACCA GCGCCATG AACGTGC CATGGCGC TTTGTTTTTTAATGG TERM 4987 4721811 - 4721791 - G 74 -11.1 -3.0395 | ACACAGTGCCTAATA CGGCTGAGG TTA CCCCAGCCA TGATACTGATCACCA YPTB3956 4722653 - 4721916 - | ABC amino acid transporter, permease subunit YPTB3957 4723690 - 4722836 - | ABC transporter, periplasmic amino acid binding protein YPTB3958 4724581 - 4723910 - | hypothetical protein TERM 4988 4724314 - 4724327 + g 71 -3.9 -4.7416 | ACTGTGTACCTGCGG CAATA ATAG TATTG TTTTTAGCATTTTCC TERM 4989 4724867 - 4724843 - R 100 -7.8 -5.626 | GAGTGGATAAAAAAA CCGGTCAAAC GAGTA GGCTGACCGG GGTTAAATATTATTT phoU 4725599 - 4724877 - | transcriptional regulator PhoU pstB 4726463 - 4725687 - | phosphate transporter subunit pstA 4727431 - 4726544 - | phosphate transporter permease subunit pstC 4728404 - 4727433 - | phosphate transporter permease subunit pstS 4729658 - 4728618 - | phosphate transporter subunit TERM 4990 4730093 - 4730076 - R 100 -9.1 -5.61913 | opp_overlap 4730076 AATAAAGACAAAAAA GCCGACA AATT TGCCGGC TTTCGTTAATACGCT glmS 4731970 - 4730141 - | D-fructose-6-phosphate amidotransferase glmU 4733541 - 4732171 - | bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase TERM 4991 4732793 - 4732766 - G 73 -5.4 -4.54727 | CCGCGCAAATCAAAA CGGGAGGGATCC AATA GCATCACGCCCG CTAACAATAATTTTT TERM 4992 4732967 - 4732957 - G 73 -5.4 -4.55287 | GTCAGTGATATAAAA CTCA CCT TGAG CATTATTATTATCCA TERM 4993 4733184 - 4733161 - G 71 -8.8 -3.63515 | TTTTACTGTCAACAA GCCAATCCCG CCCT CGGGCTTAGC GGCCAGCAGACGTTG TERM 4994 4733700 - 4733717 + r 91 -4.8 -5.61596 | AAAAGTGTCGGTGAT CGGCGA CGTTTT TTGCCG TTTTTTTGTCAAAAT TERM 4995 4733812 - 4733779 - R 100 -10.6 -4.57353 | gap 1, opp_overlap 4733778 4733779 TTTTACGACAGAAAA CAAGGATTATCCGAA AGAAA TTCG-ATAATCCTTG CTTATGATTTATTGA TERM 4996 4733779 - 4733812 + r 75 -10.6 -2.80654 | gap 1, opp_overlap 4733779, overlap 4733778 TTTTACGACAGAAAA CAAGGATTATCCGAA AGAAA TTCG-ATAATCCTTG CTTATGATTTATTGA TERM 4997 4734011 - 4734036 + r 93 -11.9 -3.62476 | opp_overlap 4734011 ATAAGTATTAAAAAA TGCCAGTCAGT TTTC ACCGACTGGCA TTCTATCGTTACTTA TERM 4998 4734036 - 4734011 - R 100 -14.1 -5.22794 | opp_overlap 4734011 ATAAGTATTAAAAAA TGCCAGTCAGT TTTC ACCGACTGGCA TTCTATCGTTACTTA atpC 4734573 - 4734160 - | F0F1 ATP synthase subunit epsilon atpD 4735986 - 4734604 - | F0F1 ATP synthase subunit beta atpG 4737005 - 4736142 - | F0F1 ATP synthase subunit gamma TERM 4999 4737059 - 4737029 - R 89 -12.7 -2.82516 | gap 1, overlap 4737054 CTCCTCATTACCAGA CGG-CCTGCTTTCC TAAC GAAAAGCAGGACCG CATAGCGTTACCAGG atpA 4738608 - 4737067 - | F0F1 ATP synthase subunit alpha atpH 4739156 - 4738623 - | F0F1 ATP synthase subunit delta atpF 4739641 - 4739171 - | F0F1 ATP synthase subunit B atpE 4739942 - 4739703 - | F0F1 ATP synthase subunit C atpB 4740816 - 4739992 - | F0F1 ATP synthase subunit A TERM 5000 4740494 - 4740474 - G 78 -6.1 -4.71426 | TGTTCATCAATAAAA CCCAAACAA AGA CTGTTAGGG CTAATGGTGCGATGA atpI 4741239 - 4740856 - | F0F1 ATP synthase subunit I gidB 4742526 - 4741906 - | glucose-inhibited division protein B gidA 4744560 - 4742671 - | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA