TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.636173 %AT, 740223 nt, 4069 terms. Intergenic: 0.669775 %AT, H2T: 311089 nt, 1851 terms; T2T: 59724 nt, 768 terms; H2H: 57133 nt, 709 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|189485003|ref|NS_000191.1| Uncultured Termite group 1 bacterium phylotype Rs-D17, complete genome (length 1125857) TGRD_001 982 - 2259 + | hypothetical protein TERM 1 2293 - 2281 - f 77 -9.1 -3.33214 | opp_overlap 2280, overlap 2279 ATGCGAAGCATAAGA GGAGC GAA GCTCC GTGCGTTGTTGCCTT TERM 2 3177 - 3158 - f 74 -2.1 -5.58209 | overlap 3159 GCAAACTCAAAAAAA TGGCG TTGTTATGCC CGCCA TTAACACAATATCAT TERM 3 3443 - 3464 + F 100 -8.7 -5.84432 | opp_overlap 3445, overlap 3445 TTATAAATTATGAAA AAGCCTGCA GAAA TGCAGGCTC TTTTTTTGTGTTGTG TERM 4 3445 - 3462 + F 100 -11.3 -4.53737 | opp_overlap 3445, overlap 3443 ATAAATTATGAAAAA GCCTGCA GAAA TGCAGGC TCTTTTTTTGTGTTG TERM 5 3462 - 3445 - f 100 -11.3 -4.85267 | opp_overlap 3445 3443 ATAAATTATGAAAAA GCCTGCA GAAA TGCAGGC TCTTTTTTTGTGTTG TGRD_002 3878 - 5134 + | hypothetical protein TERM 6 5168 - 5156 - f 77 -9.1 -3.33214 | opp_overlap 5155, overlap 5154 ATGCGAAGCATAAGA GGAGC GAA GCTCC GTGCTTGTAGTTGTC TERM 7 5348 - 5335 - f 80 -9.5 -3.5771 | AAAAACTGTGTTAAA GGCGC TCTG GCGCC TCAAATAACTCAAAA TERM 8 5774 - 5755 - f 93 -9.3 -4.33907 | TATAAATAGTCAAAA GCCGTCT TAAAGT AGACGGC AAAAAAACAGTAAAA TGRD_003 6071 - 6520 + | hypothetical protein TERM 9 7109 - 7090 - f 78 -2.1 -5.59564 | overlap 7091 ACAAACTCAAAAAAA TGGCG TTGTTATGCC CGCCA TTAACGCAATTAATA TERM 10 7931 - 7918 - f 89 -3.1 -5.8901 | opp_overlap 7918 AGATAAAAGAAAAAA TGGAC TCCG ATCCA TATTTTAACGCTAAA TGRD_004 8206 - 9327 + | DNA polymerase III beta subunit TERM 11 10746 - 10768 + G 95 -8.4 -5.00616 | GGCATAATGCAGTCT GTTGTCGGCG ATG CGCTTACAAC TTTTTTGGAAGAAAA TERM 12 10930 - 10911 - g 70 -6.4 -4.07568 | overlap 10912 TCTCTTCCTGGAAAA CTTGCGGA CTGT TCCGAAAG AGATCCGCAAAAAAC TGRD_005 9654 - 12146 + | DNA gyrase subunit B TERM 13 13042 - 13026 - g 74 -9.5 -3.00215 | opp_overlap 13026 AAACTCTTATATAGA TTACGCT ATG AGCGTAA TTGTCGGAAGAGCGT TERM 14 13026 - 13042 + G 75 -9.5 -3.28791 | opp_overlap 13026 AAACTCTTATATAGA TTACGCT ATG AGCGTAA TTGTCGGAAGAGCGT TERM 15 13408 - 13424 + G 73 -9.5 -2.86164 | opp_overlap 13404 ATTCCTAATTATGAC GGTTCTT TAA AAGAACC TGTGATACTTCCCAC TGRD_006 12928 - 15435 + | DNA gyrase subunit A TERM 16 15716 - 15727 + T 74 -3 -5.37593 | GCTGGTATTTTATTT GTTA TTTT TAAC TTTTTTCATTTCGGA TGRD_007 17126 - 15723 - | aromatic amino acid transport protein TERM 17 15917 - 15929 + g 70 -2.7 -5.1361 | AAGTTTTGTGATTTT CAAGA TTT TTTTG TTTTTTAAACTTTAT TERM 18 16527 - 16512 - G 72 -4 -5.00884 | gap 1, opp_overlap 16523, overlap 16513 16522 16523 ACCGTGCGGAAAAAA TCC-GCT TAA AGCAGGA TCGCCTGTATGTTCG TERM 19 18508 - 18544 + r 74 -5.9 -4.58424 | opp_overlap 18509 18521, overlap 18509 CTGACAAGCGAAAGA CTTTGAGTTGAAAGCTG TCA CGGCTATTGACTCAAAA TTTTCTGTAATGCTA TERM 20 18509 - 18543 + r 79 -9.4 -3.34332 | opp_overlap 18509 18521, overlap 18508 TGACAAGCGAAAGAC TTTGAGTTGAAAGCTG TCA CGGCTATTGACTCAAA ATTTTCTGTAATGCT TGRD_008 23094 - 18880 - | CoA enzyme activase TERM 21 22456 - 22481 + g 82 -10.5 -3.64431 | overlap 22459 AAAGAAAAGCGGTCC TCCGAGGAAAC ATAC GTTTCCTCTGA TTGTGTGTCCTCTTG TERM 22 22459 - 22478 + g 79 -10.8 -2.92712 | overlap 22456 GAAAAGCGGTCCTCC GAGGAAAC ATAC GTTTCCTC TGATTGTGTGTCCTC TERM 23 22621 - 22605 - G 84 -7.9 -4.57073 | opp_overlap 22590 22606, overlap 22606 CAGTTTTTGCAAAAA CGCCGCA CCT TGCGGCT ATTGGATAAACTGTT TERM 24 22606 - 22620 + g 83 -11.4 -3.09505 | opp_overlap 22605 22606, overlap 22590 AGTTTTTGCAAAAAC GCCGCA CCT TGCGGC TATTGGATAAACTGT TERM 25 22620 - 22606 - G 85 -11.4 -3.33922 | opp_overlap 22606 22590, overlap 22605 AGTTTTTGCAAAAAC GCCGCA CCT TGCGGC TATTGGATAAACTGT TERM 26 24092 - 24116 + H 82 -4.3 -5.45652 | TAGAGATTGTTTTGA CAGGACATTGT CTA GTAATATCCTG TTTTTTATTCCGCCT TGRD_009 24367 - 24873 + | peptide deformylase TGRD_010 24870 - 25808 + | methionyl-tRNA formyltransferase TGRD_011 26002 - 26334 + | thioredoxin TERM 27 28555 - 28531 - g 95 -7.1 -5.35354 | GATATAAGGAAAAAA CAGCTGAGACA AGT TGTGACAGCTG CATCAGACGGTGCTC TGRD_012 27703 - 28611 + | thioredoxin reductase TERM 28 28809 - 28796 - g 72 -3.9 -5.02074 | opp_overlap 28796 TTATCCGTCAAAAAA TTTCA GGCA TGAAA TTTTTAAAGATTATA TERM 29 29680 - 29695 + G 79 -3.2 -5.46706 | TAGGCATATCATTGT GCGTTG AAAA CAAAGC TTTTTATTTTCCAAT TGRD_013 28608 - 31334 + | DNA polymerase I TGRD_014 31331 - 31930 + | dephospho-CoA kinase TGRD_015 32096 - 33388 + | transcription termination factor TERM 30 33381 - 33365 - f 77 -9.5 -3.24059 | opp_overlap 33364 33365, overlap 33360 CTAAAACAGATGGAA CTTTCCA GTA TGGAAAG GTTATAACGGCTTGG TERM 31 33365 - 33381 + F 72 -9.5 -2.58579 | opp_overlap 33360 33365, overlap 33364 CTAAAACAGATGGAA CTTTCCA GTA TGGAAAG GTTATAACGGCTTGG TERM 32 33673 - 33696 + G 82 -10.4 -3.52192 | AGCGGGCTTTATGAT TTTATCCGCG GAAA TGCGGATAAA TTATCTCAAGTTAAG TERM 33 33992 - 33982 - g 73 -5.4 -4.64591 | GAACGAGAGATAAAA GAGA TAA TCTC AAGTGAAAATGCGTA TGRD_016 33481 - 34038 + | hypothetical protein TERM 34 34475 - 34465 - T 86 -2.6 -5.85011 | opp_overlap 34465 CAAAAACTAAAAAAA TATT TTG AATA TTTTTAAGCTTCTTA TERM 35 34896 - 34919 + T 84 -8.3 -4.49644 | opp_overlap 34901, overlap 34901 CATCCGTAAATGCTT TAAAATGCG CTTTAC CGCATTTTA TTTTAAGTTTTTCCT TERM 36 34901 - 34914 + T 73 -3.8 -5.14698 | opp_overlap 34901, overlap 34896 GTAAATGCTTTAAAA TGCG CTTTAC CGCA TTTTATTTTAAGTTT TERM 37 40497 - 40508 + T 73 -4.4 -4.91429 | opp_overlap 40486, overlap 40488 TTAAGCCAGTTGCTG TGGA ACTG TCCA TTTTCTTTGGAGTTT TERM 38 41669 - 41644 - T 70 -4.6 -4.66833 | CTTTAACTTCAAAAA CGGGACAGTC GTCTAG GTTTGTCCCG CCAGCAACCCTATAG TGRD_017 43154 - 42522 - | ribonuclease HII TGRD_018 44041 - 43643 - | 50S ribosomal protein L19 TGRD_019 44888 - 44187 - | tRNA (guanine-N1-)-methyltransferase TGRD_020 45189 - 44878 - | RimM-like PRC domain protein TGRD_021 45424 - 45194 - | hypothetical protein TGRD_022 45714 - 45460 - | S16-like 30S ribosomal protein TGRD_023 46149 - 47039 + | bifunctional protein FolD TERM 39 47707 - 47670 - T 77 -9.5 -3.22475 | gap 1, opp_overlap 47667, overlap 47668 47673 TCCATTTCCACAATA CAGTTTTTACTGATACAC TTA GTTTATCAGTAAAAA-TG GAAATATCTTGAAAT TERM 40 47705 - 47673 - T 86 -12.3 -2.50252 | opp_overlap 47667, overlap 47670 47668 ATTTCCACAATACAG TTTTTACTGATACAC TTA GTTTATCAGTAAAAA TGGAAATATCTTGAA TGRD_024 49175 - 47904 - | seryl-tRNA synthetase TERM 41 48675 - 48703 + g 78 -6.7 -4.57073 | opp_overlap 48683 AGCGGAGCCTTCATT TTTTAGAACCGCA AAA TGCGGACCTGAAA TTTTTGAAGCAGCTG TERM 42 48695 - 48683 - G 73 -9.1 -3.30124 | opp_overlap 48675 CTTCATTTTTTAGAA CCGCA AAA TGCGG ACCTGAAATTTTTGA TGRD_025 53089 - 49565 - | DNA polymerase III subunit alpha TERM 43 50412 - 50400 - G 72 -7.7 -3.65351 | opp_overlap 50399 50396, overlap 50388 TTATCTTTACCGAAA GAGTC GAA GACTC CTGCCTTTATAAGAC TERM 44 50816 - 50797 - G 70 -6.4 -4.15044 | overlap 50800 CTGTTTTGTAAGAAA TTATGCCG TAAG CGGCAGAA TGGGATTTATTAAAG TERM 45 51518 - 51544 + g 74 -8 -3.92577 | opp_overlap 51517 51518 51520 TTTGTTTGCTATAAC CATACCGGCG GCGTGCA CTCCGGTATG TCTTTTTAAGCCTTC TERM 46 52575 - 52585 + g 100 -4.6 -6.4753 | CGGTATTCTATTGCG GCGT TTT GCGC TTTTTTTTTATTTCC TERM 47 52868 - 52880 + g 74 -7.7 -3.91473 | CACATATATTTCACA GCCTA TGA TAGGC TTTATGCCGCTTTGT TERM 48 53603 - 53589 - H 76 -3.6 -5.27938 | overlap 53591 ACGCTGAAACAAAAA TACTTT CTA AAAGCA GCGAAATGCAGGGAT TGRD_026 53699 - 54268 + | hypothetical protein TGRD_027 54382 - 55386 + | M48 family peptidase TGRD_028 57428 - 56673 - | exodeoxyribonuclease III TGRD_029 57980 - 57519 - | hypothetical protein TGRD_030 58650 - 58069 - | putative GTP-binding protein EngB TERM 49 58220 - 58241 + g 73 -7.4 -4.08394 | ATAGTTTGAGGCACT TTATCGCA TTTGTT TGCGATAA TTTTAAAAGAAATAT TERM 50 58544 - 58532 - G 78 -7.7 -4.1891 | opp_overlap 58530 58532, overlap 58528 TTTTGCGAACATAAA GCGTT TAT AACGC TGCTTTTTCCGACAT TERM 51 58605 - 58581 - G 73 -5.7 -4.61482 | opp_overlap 58598 TTCCGGAAAAAATAA TCTCTGCAACA CTT TTTGGCAGAGA ATCCGCCTCTGCTGT TERM 52 58724 - 58770 + r 100 -24.8 -4.1891 | CTAAGTTTCCGCTTG CGTCGTTTATTCTCAGCAGGCA GTT TACCTGCTGAGAATAAACGATG TTTGTATTGACAGGG TGRD_031 59597 - 58881 - | hypothetical protein TGRD_032 60039 - 59572 - | NUDIX family hydrolase TERM 53 60225 - 60239 + r 72 -5 -4.72272 | opp_overlap 60225 ATACAAATAATCTAA GTTGAA AGT TTCAGC TTTTTGGTGCGGCGG TERM 54 60243 - 60287 + r 82 -8.6 -4.07678 | opp_overlap 60275 GAAAGTTTCAGCTTT TTGGTGCGGCGGTCATTTGT CATTA AAAAGTAGCCGCCGCGTCAA TTTCCTATTTTAAAG TGRD_033 61621 - 60335 - | CinA-like protein TGRD_034 62864 - 61800 - | threonine synthase TERM 55 62322 - 62341 + g 72 -7.8 -3.69902 | opp_overlap 62316 62320 62317 CGGCATAAACTGATA GTCAGGAG ACTG CTCCAGAC TTTCGCATATTTCAT TERM 56 62635 - 62647 + g 70 -9.1 -3.04398 | overlap 62634 62646 ATGACAATCTTGCTT CCGTC TTC GACGG CTTTTGAAACAGCCA TGRD_035 63851 - 63069 - | hypothetical protein TERM 57 64085 - 64073 - H 74 -6.3 -4.33248 | opp_overlap 64069 TAAGCGTATAACAAA CAGAT AAT ATCTG CTAGTGAATTTCTTA TERM 58 65764 - 65774 + H 71 -5.4 -4.56597 | overlap 65760 TTTATTCATGGCTGA GAAC TCG GTTC TTTTTACGGCAAAAC TERM 59 68569 - 68549 - g 73 -3.3 -5.13354 | overlap 68551 TTGATAAAAAAGAAA TTCTAAGCA AGC TGCTTAATA AATATTCTTACAGAA TERM 60 70579 - 70597 + G 72 -3.8 -5.0538 | CCCAATAACGACGTT CAGCGT AAAAACG GCGCTG TTTTTTGGACTGGAG TERM 61 70978 - 70965 - g 88 -5.3 -5.5208 | opp_overlap 70972, overlap 70972 GGATAATATAAAAAA GGAAA AATA TTTCC AGAAATATATACTGA TERM 62 70985 - 70972 - g 74 -2.5 -5.27769 | opp_overlap 70972, overlap 70965 ATAAAAAAGGAAAAA TATTT CCAG AAATA TATACTGATGGGATT TGRD_036 67198 - 71394 + | hypothetical protein TERM 63 71426 - 71448 + F 76 -2.7 -5.50723 | overlap 71428 GAAGCATACATTTAA TTCCCTG CTGACTTTT CAGGGGA TTTTTATTTTCGTCA TERM 64 72466 - 72439 - f 100 -13.6 -3.72141 | opp_overlap 72434 72433 72444 ATACTTAGATTCAAA TGTAACGGCACA CTTC TATGCCGTTACA TCGAGTTTATAAAAG TERM 65 72701 - 72683 - g 79 -10.3 -3.22878 | opp_overlap 72677 72683, overlap 72681 72676 CAAGCAAAGCGAATA CGGCAGA GTTAT TCTGCCG TTTACAGTTTTGAGA TERM 66 72683 - 72701 + G 88 -11 -3.76413 | opp_overlap 72683 72681 72676, overlap 72677 CAAGCAAAGCGAATA CGGCAGAG TTA TTCTGCCG TTTACAGTTTTGAGA TGRD_037 72603 - 74315 + | type I restriction-modification system methylase subunit TERM 67 75131 - 75121 - g 72 -4 -4.99435 | overlap 75114 TGTAACAATTAAAAA CTTT AAG AAAG GTAAATTATTTCTTG TGRD_038 74315 - 75619 + | type I restriction-modification system substrate-binding subunit TERM 68 75649 - 75632 - g 71 -4.2 -4.8543 | TAATGCCTATAAAAA CAAAAG AAGAAA CTTTTG AAAATGAAATAGAAA TERM 69 76416 - 76402 - g 91 -5.8 -5.56264 | GTTAAAGATAAAAAA GAAAAT ATT ATTTTC CCGCGTTATCATCAA TGRD_039 75619 - 78621 + | type I restriction-modification system restriction subunit TGRD_040 80129 - 79077 - | hypothetical protein TERM 70 79691 - 79723 + g 79 -10.9 -2.90054 | overlap 79687 79693 TTTGGTAGTTTTCAT CTTTTTTAGAAAAAA TAA TTTTTTCTAAGAGAG TATCATAGTTTAATG TERM 71 80792 - 80802 + r 70 -4 -4.88684 | opp_overlap 80792 TTGCAGCAGAAATAT TATC AAT GATA TTTTGTATTTCTATT TGRD_041 82673 - 81087 - | type II DNA modification methylase TERM 72 81485 - 81497 + g 76 -4.9 -5.00616 | TGTTTAATATATCTG CAAAA GAT TTTTG TTTTTTAGAAAGCGC TERM 73 82831 - 82784 - R 100 -14.7 -4.83269 | gap 2, opp_overlap 82775 82773 82791, overlap 82775 82787 82789 82791 ACATTATATTAAAAA TAATATATACTGTGGAATACACC GGCC GGTGTATTCCACAGTAT-T-TTA AGAGGAATAATTAAT TERM 74 82830 - 82787 - R 100 -17 -4.50988 | opp_overlap 82775 82773 82791, overlap 82784 82789 82791 TTATATTAAAAATAA TATATACTGTGGAATACACC GGCC GGTGTATTCCACAGTATTTT AAGAGGAATAATTAA TERM 75 82828 - 82789 - R 100 -19.6 -3.8493 | opp_overlap 82773 82791, overlap 82787 82784 82791 ATATTAAAAATAATA TATACTGTGGAATACACC GGCC GGTGTATTCCACAGTATT TTAAGAGGAATAATT TERM 76 82791 - 82826 + r 100 -22.2 -4.08216 | opp_overlap 82789 82787 82784 82791 ATTAAAAATAATATA TACTGTGGAATACACC GGCC GGTGTATTCCACAGTA TTTTAAGAGGAATAA TERM 77 82826 - 82791 - R 100 -22.2 -3.48772 | opp_overlap 82791, overlap 82789 82787 82784 ATTAAAAATAATATA TACTGTGGAATACACC GGCC GGTGTATTCCACAGTA TTTTAAGAGGAATAA TGRD_042 86781 - 84148 - | alanyl-tRNA synthetase TERM 78 86125 - 86137 + g 70 -2.7 -5.14563 | ACCTGTATCGATGTT TTTTC TGG GAAGA TTTTTTAATGAACCG TERM 79 86223 - 86251 + g 74 -9.5 -3.02263 | opp_overlap 86230, overlap 86225 86235 CACAATTGCACTCCG GACAGCATGCGGG GCT TCCGCAGCCTGTC TCTTGCCCCAAATCT TERM 80 86715 - 86728 + g 72 -8.1 -3.62775 | opp_overlap 86715 AGTCAGACGGAACGA CAGCG CATC CGCTG TTCTTGAAAAATCCT TERM 81 86895 - 86877 - R 83 -6 -5.1523 | TTTATAACATAAAAA GCAGTC ATAGAGA GACTGC TTACGGCATAGAGGA TERM 82 88035 - 88060 + r 74 -6.2 -4.63218 | opp_overlap 88035 CAGTCGTGTCTTAAA GCGTCGAT AGGGTTTAGA ATCGACGC TTTTCTTGCCGGCCA TGRD_043 89971 - 88019 - | ABC-type macrolide exporter ATP-binding/permease component TERM 83 89401 - 89418 + g 73 -3.5 -5.0809 | TCGTTATGCCTGTAT TATTCAA ATCT TTGAGTA TTTTTATAATTTCTT TGRD_044 91033 - 90128 - | ABC-type macrolide exporter membrane component TERM 84 90738 - 90754 + g 76 -9.5 -3.40775 | overlap 90736 CTTATAGTTCTTGCC GCATCAA CCA TTGATGC TCTTTCGCTGGAACT TGRD_045 92255 - 91035 - | outer membrane efflux protein TolC TGRD_046 92798 - 92932 + | 50S ribosomal protein L34 TGRD_047 92942 - 93361 + | RNase P protein component TERM 85 93528 - 93553 + G 72 -7.5 -3.82218 | TTAAAAGAATTATAC GTTGCCGGC CTTTTTGT GCCGGCGGC TTTGATCCTGTACCT TGRD_048 93365 - 93589 + | hypothetical protein TERM 86 94183 - 94173 - g 73 -5.4 -4.63107 | overlap 94180 AGCAAAGAATTAAAA GAGA ACA TCTC GTTGACAAGAGCTTT TERM 87 94331 - 94341 + G 70 -2.6 -5.07652 | TAAAAATTCGATGGA TTTT GAT AAAA TTTTATTTTCAAGAC TGRD_049 93609 - 95168 + | protein translocase subunit YidC TGRD_050 95586 - 95954 + | CoA-binding domain protein TERM 88 96203 - 96183 - g 85 -2.7 -5.88061 | AAAAAATCAAAAAAA TTTAAAACA AAG TCTTTTAAA GCGGTGTTATTTGAT TGRD_051 96120 - 96836 + | putative phosphatase/phosphohexomutase TERM 89 97240 - 97224 - f 79 -4.5 -5.35222 | AAAATTGACAAAAAA TCTTTAA AAT TCAAAGA CTGCAAATCTCATCT TGRD_052 97506 - 98270 + | Par A-like chromosome partitioning protein TGRD_053 98308 - 99168 + | ParB-like chromosome partitioning protein TERM 90 99220 - 99197 - f 81 -8.4 -4.18018 | GTTTTTTATTTAAAA TTTTGATATA AAAA TATATCAAAA AAACAATTTATAAAA TERM 91 99778 - 99767 - g 77 -3 -5.56264 | CTCAAAGATAAAAAA GAAA AAAC TTTC TGAAAAATCTATATA TERM 92 99900 - 99921 + G 71 -4.5 -4.84017 | gap 1, opp_overlap 99891 99900 GAGAAACGTCAAGAA CCATTTG-GC GGT GTACAAATGG TTTTTATCGGAGATT TGRD_054 99507 - 100787 + | RecD-like exodeoxyribonuclease V alpha chain TERM 93 102157 - 102147 - g 78 -4 -5.28826 | AAACTTCACAAAAAA GATT TCC AATC AATATATTAAAAGAA TGRD_055 101786 - 102286 + | Csn1-like CRISPR-associated protein TERM 94 103999 - 103987 - g 77 -2.7 -5.43866 | opp_overlap 103989 103990 103991 CAATGCCCAAAAAAA TTTGC CGC ACAAA GTATGGCGGTTTTAT TERM 95 104645 - 104627 - g 78 -3.8 -5.27335 | opp_overlap 104627, overlap 104621 TCTTTTAAAGAAAAA GAGGATCC TAA AGATACTC TTTATCGGGCTTTAT TGRD_056 102302 - 105400 + | Csn1-like CRISPR-associated protein TGRD_057 105401 - 106312 + | CRISPR-associated protein Cas1 TGRD_058 106296 - 106622 + | CRISPR-associated protein Cas2 TERM 96 106644 - 106632 - T 77 -9.1 -3.33509 | opp_overlap 106630 CTTTAAATAATTGAA CCGGT ATA ACCGG CATCTTGCGAAATAA TERM 97 106684 - 106697 + T 76 -2.5 -5.42259 | GAGTTTACCCATAGT TATTT TATG AAATA TTTTTTTAAAAATCA TGRD_059 107973 - 107149 - | hypothetical protein TGRD_060 109036 - 107990 - | hypothetical protein TERM 98 108856 - 108884 + g 73 -7.3 -4.05208 | ATGTTATAACATTTT TGGCGATTATGGC GCT GCCTTCTTCGCCA TTATTTGATATGCCT TERM 99 109293 - 109282 - g 71 -7.2 -3.82946 | TCAGCGCAAATACAA GCGG GAAA CCGC ATCGCTATTATAGGA TERM 100 109783 - 109767 - g 73 -2.3 -5.26247 | overlap 109775 GGAAAAGAAAGAAAA TCATAAA GCT TTAATGA AAGAACAGCAGCGCG TGRD_061 109198 - 110598 + | putative ABC transporter duplicated ATPase component TGRD_062 111863 - 110619 - | U32 family peptidase TERM 101 111532 - 111548 + g 76 -2.3 -5.52909 | GTTGATATATGTATA GGAATTT GCG GAATTTC TTTTTTTACATATTG TERM 102 113748 - 113761 + r 74 -5.2 -4.7497 | opp_overlap 113748 GGCACACGCCCGAAA CGGC TTTAAT GCCG TTTTTCATCACTACG TERM 103 113910 - 113930 + r 78 -7.5 -4.13282 | opp_overlap 113903, overlap 113927 GAATCGAACCCACAT CTCCGACTT GGG AAGCCGGGG TTTTACCACTATACT TGRD_063 115454 - 114009 - | CCA-adding tRNA nucleotidyltransferase TGRD_064 116705 - 115482 - | M16 family peptidase TERM 104 116049 - 116069 + g 76 -4.8 -5.0538 | overlap 116040 TTCGTGCTGTTTTAT GTTGAAGA CAGGT TTTTCAAC TTTTTTGCCATCGGG TGRD_065 118033 - 116810 - | M16 family peptidase TGRD_066 120638 - 119220 - | hexuronate transporter TERM 105 119919 - 119942 + g 78 -6 -4.88786 | TTGTTCTTTCGTATC GCTGTGTATA TAGT TATACTCGGC TTTGTTTATTTTCCT TGRD_067 122106 - 120700 - | glucuronate isomerase TERM 106 122029 - 122052 + g 73 -6.8 -4.19577 | overlap 122030 122044 ATCCAGAATAGGCTT TTTTTCCGCA TATT TGTGGAAAAG TTCTTTTGCCGCTTC TGRD_068 122961 - 122128 - | putative mannonate dehydrogenase TERM 107 122626 - 122615 - G 86 -4.4 -5.72207 | TCTAAATCAAAAAAA GAAC AGAC GTTC GGATTATTCAAATCT TGRD_069 124042 - 122948 - | mannonate dehydratase TERM 108 123753 - 123718 - G 100 -10.6 -4.8622 | gap 1, opp_overlap 123728 123750 123750 GTGTCCAATCAAAAA CCGGCATAA-AGTTGTA ACA TACGACTTTTACGCCGG CTCTGCCGAGATTTT TGRD_070 125075 - 124050 - | 2-dehydro-3-deoxygluconokinase TERM 109 124151 - 124165 + g 76 -10 -2.97739 | opp_overlap 124149, overlap 124150 TGTGTTTTAAGCAGC TTGCGG CAA CCGCAA ATTCTATTGTTTTCT TGRD_071 126059 - 125094 - | 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxyphosphogluconate aldolase TERM 110 125165 - 125185 + g 70 -8.3 -3.46081 | opp_overlap 125154, overlap 125178 TAATGCGCAGATTCC CCGCTTCAT CGT ATGAAGCAG TTCCTTCATTAAATA TERM 111 125670 - 125645 - G 70 -8.3 -3.32647 | gap 1 CCTTAATCATATTAA TTCCGCCGGCAG CTT CCGCCGG-GAAA AATTTTACGACTTCA TERM 112 126089 - 126103 + H 73 -7.2 -3.97569 | overlap 126088 126091 CCTGATTTATAATTG TACAGA GAT TCTGTA TCTTTGTTGTTTTTC TERM 113 126378 - 126362 - H 74 -9.3 -3.06037 | opp_overlap 126365 AGCTTAAAGGATAGA GCGCCGG CCT CCGGAGC CGGTAATTCCGGTTC TERM 114 128280 - 128259 - H 73 -4.5 -4.87665 | opp_overlap 128258 GCTTATTGACAAAAA CTCTATAAA ATTA TTTATGGAG AGTTTGATCCTGGCT TERM 115 128878 - 128858 - H 81 -8.3 -4.25848 | AAGTCTTTAGTAAAA TTTCCCGGC TCA ACCGAGAAA AGCCTAATGGATACT TERM 116 129777 - 129758 - H 72 -9.2 -2.65808 | overlap 129755 AGTCGTAACAAGGTA GCCGTACG AGAA CGTGCGGC TGGATCACCTCCTTT TERM 117 130252 - 130270 + H 93 -3.2 -6.02345 | opp_overlap 130252 GCATGGTGGTAAAAT GATAAAAA ATG TTTTTTTC TTTTTTTTGTCATTC TERM 118 130762 - 130743 - H 80 -9.4 -3.63627 | TCGGTATAGCCTAAA CTATTGTG TTTA CACAATAG GGTTGCAGGACCGCG TERM 119 132933 - 132917 - H 72 -5.1 -4.78572 | overlap 132921 GCTCAACGAATAAAA GCTACCC CGG GGATAAC AGGCTTATTTTCTCC TERM 120 133281 - 133295 + H 70 -7.2 -3.74693 | TTTCCCTGAAGGGCA CTTGTA GAC TACAAG TTTGATAGGCTGGAA TERM 121 133955 - 133970 + H 91 -5.4 -5.9218 | opp_overlap 133955 TGTTTTGAATCTAAA CTTCTC TCGC GGGAAG TTTTTTTGTTATATG TERM 122 134278 - 134258 - g 74 -8.3 -3.64703 | opp_overlap 134276, overlap 134259 CTCTTGTCATTGAAA GCGGAGATA TTG TATCTCCGG CAAAAGTCGTTGTGG TERM 123 134277 - 134259 - g 82 -11.8 -2.78679 | opp_overlap 134276, overlap 134258 TCTTGTCATTGAAAG CGGAGATA TTG TATCTCCG GCAAAAGTCGTTGTG TGRD_072 134011 - 134526 + | 50S ribosomal protein L10 TGRD_073 134853 - 135230 + | 50S ribosomal protein L7/L12 TERM 124 135273 - 135261 - f 83 -4.9 -5.4148 | opp_overlap 135261 135265, overlap 135253 TAAAGAATCAAAAAA CATTT GAC AAATG ATATTTATTATGTAT TERM 125 135265 - 135307 + F 78 -7.5 -4.1399 | gap 1, opp_overlap 135253 135261 135277, overlap 135261 135275 GAATCAAAAAACATT TGACAAAT-GATATTTATTA TGTA TAATAAATGTTTATTTGTCA TTTGTGTATAAATAA TERM 126 136148 - 136137 - g 81 -3 -5.626 | GATCTTATAAAAAAA CTTT GGGC AAAG GGTTTTACTAAAGTA TERM 127 137273 - 137295 + G 79 -11.3 -3.02144 | opp_overlap 137272, overlap 137277 GATGGGTTGCAATAT GCAGCGGCA AGCAG TGCCGTTGC TGTTAGCGGAAGTCC TERM 128 138229 - 138216 - g 88 -3.1 -5.85011 | gap 1 GAAAAATTAAAAAAA GGC-GA TGA TCTGCC GGTTTCGGTAAATAA TGRD_074 135342 - 139115 + | DNA-directed RNA polymerase beta chain TERM 129 140123 - 140110 - g 74 -2.5 -5.24989 | TGAGATATTAAAAAA TAAAA TTCC TTTTA TAGAGAATTTTTCAA TERM 130 140797 - 140817 + G 74 -4.7 -4.77165 | opp_overlap 140797 140807 140808, overlap 140816 GATTCCCAAAGAAAT GGCTTTAGA ACT TTTCAAGCC TTTTATTGTAAAAGA TERM 131 141749 - 141737 - g 75 -5.5 -4.81851 | AGCGAAATTGAAAAA CAAGC TAA GCTCG GCTTGATAACCGAAT TERM 132 142130 - 142119 - g 73 -7.2 -4.08394 | opp_overlap 142118 142119 ATACTGCTTTGAAAA CCGC AGAA GCGG GTTATCTAACAAGAA TERM 133 143119 - 143109 - g 73 -5.4 -4.57837 | opp_overlap 143109, overlap 143087 ATATTTTGGCAAAAA TTCC GCA GGAA ATTTCAAGAACAAAA TERM 134 143640 - 143630 - g 84 -3.2 -5.73563 | ATTAAAGGAAAAAAA GGAA AAG CTCC AATTGCTCATTCTAT TGRD_075 139115 - 143896 + | DNA-directed RNA polymerase beta' chain TGRD_076 143883 - 144278 + | 30S ribosomal protein S12 TGRD_077 144619 - 144302 - | hypothetical protein TGRD_078 144621 - 145100 + | 30S ribosomal protein S7 TERM 135 146624 - 146612 - g 70 -3.3 -5.03314 | TGTAGGTTTAAAAAA TACGG GCA CCGGA GATACTCTGTGCGAT TGRD_079 145467 - 147548 + | elongation factor G TGRD_080 147563 - 148762 + | elongation factor Tu TGRD_081 148931 - 149257 + | 30S ribosomal protein S10 TGRD_082 149290 - 149973 + | 50S ribosomal protein L3 TERM 136 150621 - 150605 - g 100 -7.3 -5.44119 | TGCAGGGCAAAAAAA TTCCCCA CTG TGGAGAA AAGGCGGTATCATTT TGRD_083 150375 - 150995 + | 50S ribosomal protein L4 TGRD_084 151034 - 151324 + | 50S ribosomal protein L23 TERM 137 152193 - 152161 - g 73 -7.1 -4.15044 | gap 2, overlap 152165 TTCTGCGGGAAGAAA CCG-ACACATG-GGC AGAAA GCCTCATGTGCGCGG AACTGCAATGAATGC TGRD_085 151529 - 152356 + | 50S ribosomal protein L2 TGRD_086 152384 - 152668 + | 30S ribosomal protein S19 TGRD_087 152778 - 153125 + | 50S ribosomal protein L22 TGRD_088 153204 - 153899 + | 30S ribosomal protein S3 TGRD_089 153976 - 154389 + | 50S ribosomal protein L16 TERM 138 154540 - 154522 - g 72 -3.9 -5.00884 | overlap 154524 AGTTCCTGTAAAAAA TCCTCTT GAAAT AAGAGAA ATAAGAAAAGATATA TGRD_090 154397 - 154600 + | 50S ribosomal protein L29 TGRD_091 154636 - 154899 + | 30S ribosomal protein S17 TGRD_092 154925 - 155293 + | 50S ribosomal protein L14 TGRD_093 155499 - 155810 + | 50S ribosomal protein L24 TGRD_094 155968 - 156531 + | 50S ribosomal protein L5 TGRD_095 156550 - 156735 + | 30S ribosomal protein S14 TGRD_096 156766 - 157167 + | 30S ribosomal protein S8 TERM 139 157305 - 157290 - g 73 -3.2 -5.08824 | CGCTTAGGGAAAAAA CCGG TTTATATG CCGG AAAAAGTGAAAGCAG TGRD_097 157269 - 157835 + | 50S ribosomal protein L6 TERM 140 158183 - 158163 - g 76 -9.7 -2.95073 | overlap 158162 CGGGCAAGATTAAAG CGCTTGCAG ATA CTGCAAGAG AAAGCGGACTTGAAT TGRD_098 157844 - 158203 + | 50S ribosomal protein L18 TERM 141 158649 - 158638 - g 76 -5.8 -4.67048 | GCAGCTTAAAAGAAA CGGT TATT ACCG TTAACAGAGTTGCAA TERM 142 158898 - 158908 + G 70 -8.2 -3.38812 | overlap 158896 TTGAAACCTGCTGCT CCCG GAA CGGG TGTTATTGCGGGAGG TGRD_099 158586 - 159086 + | 30S ribosomal protein S5 TGRD_100 159083 - 159532 + | 50S ribosomal protein L15 TGRD_101 159577 - 160923 + | protein translocase subunit SecY TGRD_102 160927 - 161565 + | ATP-AMP transphosphorylase TGRD_103 161555 - 162346 + | methionine aminopeptidase TGRD_104 162348 - 162566 + | translation initiation factor IF-1 TGRD_105 162810 - 162959 + | L36-like 50S ribosomal protein TGRD_106 163105 - 163497 + | 30S ribosomal protein S13 TGRD_107 163811 - 164206 + | 30S ribosomal protein S11 TERM 143 164350 - 164338 - g 71 -4.9 -4.56597 | TGTCGTCGTGAAAAA GAAAA ACT TTTTC TGAAAGGAGAGAGAT TGRD_108 164290 - 164916 + | 30S ribosomal protein S4 TGRD_109 164957 - 165928 + | DNA-directed RNA polymerase alpha chain TGRD_110 165912 - 166265 + | 50S ribosomal protein L17 TERM 144 166569 - 166582 + G 73 -6.7 -4.26559 | overlap 166569 166571 TATGGGTATAGATCT CGGAA CGGC TTCCG TTCTTGTTTTCATTA TERM 145 166571 - 166585 + G 86 -10 -4.32402 | overlap 166569 166569 TGGGTATAGATCTCG GAACGG CTT CCGTTC TTGTTTTCATTAAAG TGRD_111 166519 - 167547 + | rod shape-determining protein MreB TERM 146 167862 - 167848 - g 85 -2.8 -5.95539 | CTTTAAACAAAAAAA TCAGGA ACT TACTGA TAAACTTCGCAGTTA TGRD_112 167603 - 168436 + | rod shape-determining protein MreC TGRD_113 168433 - 168939 + | rod shape-determining protein MreD TERM 147 169928 - 169968 + F 72 -4.8 -4.67256 | gap 1, overlap 169930 TGGAAAAAGGTCATT GCCTGTTATATTTCGGGAA GAAG TCCCCGAAATATC-CAGTC TTTTATCATTTCTTC TERM 148 170038 - 170048 + F 77 -5.4 -4.91046 | overlap 170044 TTGGTAGTTGTGGAA GCTT TTT AAGC TTTGTTTATTTTCTA TERM 149 170126 - 170136 + G 73 -5.4 -4.63218 | opp_overlap 170135 AAGGAAGATATATCT GCTT ATG AAGC TTTTCTTAAAAAACA TERM 150 170150 - 170167 + G 100 -8.5 -6.12458 | opp_overlap 170150 GCTTTTCTTAAAAAA CACAAGA TGAT TCTTGTG TTTTTTATTTTTTTA TERM 151 170167 - 170150 - g 95 -8.5 -5.00616 | opp_overlap 170150 GCTTTTCTTAAAAAA CACAAGA TGAT TCTTGTG TTTTTTATTTTTTTA TERM 152 171022 - 170999 - g 73 -6.8 -4.26188 | overlap 171001 GGGATATATTTAAAA GATAAAAAGC TGCC GCTTTTTAAC AGATCGCTTCAAGCC TERM 153 171020 - 171001 - g 72 -8 -3.72985 | overlap 170999 GATATATTTAAAAGA TAAAAAGC TGCC GCTTTTTA ACAGATCGCTTCAAG TERM 154 171307 - 171289 - g 73 -3.2 -5.19916 | AAAATATGCAAAAAA TTTTCATC TCG GACAAAAA ACGGAAATAGACTTG TGRD_114 170099 - 171880 + | rod shape-determining protein MrdA TGRD_115 171877 - 173223 + | rod shape-determining protein MrdB TERM 155 173740 - 173774 + F 100 -21.8 -4.0348 | opp_overlap 173740, overlap 173744 GTCTCAAATAAAAAA TAAAGAGACTGTCTGT TAA ACAGACAGTCTCTTTA TTTATGCTGTAGTAT TERM 156 173774 - 173740 - f 100 -21.8 -5.63517 | opp_overlap 173740 173744 GTCTCAAATAAAAAA TAAAGAGACTGTCTGT TAA ACAGACAGTCTCTTTA TTTATGCTGTAGTAT TERM 157 173744 - 173770 + F 100 -18.2 -4.60949 | opp_overlap 173740, overlap 173740 CAAATAAAAAATAAA GAGACTGTCTGT TAA ACAGACAGTCTC TTTATTTATGCTGTA TERM 158 174538 - 174577 + F 100 -11.5 -6.50278 | GCGGATAATTTTATA CGTCCGTCCTTGACATA TATTTT TATGTCATGGACAGGCG TTTTTTTTTTACTTT TGRD_116 174608 - 176083 + | anthranilate synthase anthranilate synthase component TGRD_117 176080 - 176658 + | anthranilate synthase glutamine amidotransferase component TGRD_118 176655 - 177665 + | anthranilate phosphoribosyltransferase TERM 159 178257 - 178277 + G 90 -4 -5.7946 | TGGAGCCGCCGCGAT TTCCGTTC TCACT GAACCGAA TTTTTTTCTTGGCAG TGRD_119 177997 - 178773 + | indole-3-glycerol phosphate synthase TERM 160 178895 - 178911 + F 71 -6.5 -4.10552 | opp_overlap 178874, overlap 178896 CTTTTCGCAGTTTTT GCGGCAA GAC TTGCCGG TTTGATTTGATACAA TERM 161 178896 - 178910 + F 77 -10 -3.05849 | opp_overlap 178874, overlap 178895 TTTTCGCAGTTTTTG CGGCAA GAC TTGCCG GTTTGATTTGATACA TERM 162 179048 - 179071 + G 90 -8.9 -4.57569 | opp_overlap 179053, overlap 179053 GTTTTGTAAACATTG CAAAGCCGG ATTATG CCGGTTTTG TTTTTGCAGGCGTAA TERM 163 179053 - 179066 + G 84 -5.2 -5.26119 | opp_overlap 179053, overlap 179048 GTAAACATTGCAAAG CCGG ATTATG CCGG TTTTGTTTTTGCAGG TGRD_120 178987 - 179589 + | phosphoribosylanthranilate isomerase TGRD_121 179748 - 180932 + | tryptophan synthase beta chain TERM 164 181318 - 181340 + G 73 -7 -4.07568 | opp_overlap 181318 181337 AGTACGGGAATAAAC GGCATAATTG TTC CAGATATGCC TTTTGAAGAGCAGGA TERM 165 181689 - 181675 - g 70 -6.4 -4.01888 | ATTGCAGAGTATAAA GAAAGC GCC GCTTCC AAACTTGCGGAATAT TGRD_122 180925 - 181737 + | tryptophan synthase alpha chain TERM 166 181828 - 181852 + T 77 -3.5 -5.45802 | opp_overlap 181828 181830, overlap 181830 TGTTTCCTGCCAAAA GACTATGATAG CTC CTGCCATAGAC TTTTTCTTTTGAGGG TGRD_123 183695 - 182181 - | hypothetical protein TERM 167 182585 - 182595 + g 72 -4 -5.02074 | overlap 182573 CTTTTTCAACATATT GAAA CTG TTTC TTTTTTAAAACGTCA TGRD_124 184333 - 183947 - | hypothetical protein TGRD_125 185562 - 184432 - | hypothetical protein TERM 168 186559 - 186540 - g 72 -8 -3.66378 | GATATCCTATTCAAA GATATTTC AGCG GAAATATC GGACGAACAAAACGG TERM 169 187890 - 187906 + G 74 -3.7 -5.11836 | CTGAAAAATAAATAT GAAAGTC AGG GGTTTTC TTTTATTTTACCTAT TGRD_126 186168 - 188768 + | type III restriction-modification system methylase subunit TERM 170 189245 - 189235 - f 93 -5.4 -6.04419 | AAAAGAATAAAAAAA TCAC ATT GTGA CGAATCTATATTAAC TERM 171 190618 - 190607 - g 70 -3 -5.09225 | AGGCTACGGAAAAAA CTTA TATT TAAG TCACGCTTGTTTTAC TGRD_127 189675 - 192458 + | type III restriction-modification system restriction subunit TGRD_128 195338 - 192804 - | putative Fe-S oxidoreductase TERM 172 194676 - 194655 - G 82 -7.9 -4.50976 | opp_overlap 194654 194656, overlap 194656 TTTGACATTATAAAA CGACGGCGC ATAT ACGCCGTCT ATTTTTGACAAATTT TERM 173 194656 - 194675 + g 88 -10.7 -3.91164 | opp_overlap 194656 194655, overlap 194654 TTGACATTATAAAAC GACGGCG CATATA CGCCGTC TATTTTTGACAAATT TERM 174 194675 - 194656 - G 85 -11.4 -3.30104 | opp_overlap 194654 194656, overlap 194655 TTGACATTATAAAAC GACGGCGC ATAT ACGCCGTC TATTTTTGACAAATT TERM 175 194710 - 194724 + g 73 -8.6 -3.33911 | overlap 194706 AAAGTTTCTAATCTT GAAAGC CCG GCTTTC TTAGATTCTTTACAT TERM 176 194992 - 195014 + g 70 -6.4 -4.07885 | opp_overlap 194974 CTGCCGGATTCCAGC GAGAAAAGAC TAA GTTTTTTTTC TTTTAAAAGCAACTC TERM 177 195052 - 195072 + g 84 -3.1 -5.66868 | opp_overlap 195052 ATGTCCGGAGCAAAC GCTCTCTCG CAA CGGGCAAGC TTTTTTTCATTAATT TERM 178 196564 - 196576 + G 90 -9.1 -4.57073 | GTTTCAGGCATCGTT TGCGC TGG GCGCA TTTTTGGGCGGCATG TERM 179 197007 - 196991 - g 74 -5.2 -4.74103 | CCGCCAATTGAAAAA TTTCTG CATTC CAGAAA AAAACTGTGGAATAT TGRD_129 195812 - 197587 + | putative kef-type K+/H+ antiporter TERM 180 197663 - 197679 + T 83 -2.3 -5.86609 | GAAATAACTTTATCA GGAAATT TAC AATTTAC TTTTTCTTTTTTTCG TGRD_130 197987 - 197676 - | hypothetical protein TERM 181 197886 - 197903 + g 77 -2.8 -5.43866 | TTCGTCGGCTTCCCT TTTGTT ATTTTC AACAAA TTTTTTTGCCGCTTC TGRD_131 199715 - 198231 - | aspartyl/glutamyl-tRNA amidotransferase subunit B TERM 182 199585 - 199605 + g 77 -8.3 -3.89336 | overlap 199587 ATTGCTCCTGGCTGG GACGTGCAT ATT ATGCACGTA TTTGAATTTGGTTCG TERM 183 199587 - 199603 + g 84 -10.9 -3.52506 | overlap 199585 TGCTCCTGGCTGGGA CGTGCAT ATT ATGCACG TATTTGAATTTGGTT TGRD_132 201941 - 200484 - | aspartyl/glutamyl-tRNA amidotransferase subunit A TERM 184 200877 - 200896 + g 77 -10.6 -2.80028 | overlap 200876 200892 TTTCTTAACTTCATA CCCGAGCG ACTC CGCGCGGG ATTTCGCATATTCGT TERM 185 201471 - 201455 - G 71 -9.3 -2.52896 | CCATTCCCGAACTTA CGGCTGC CGC GCTGCCG CCTGAAGATCCGCCC TGRD_133 202936 - 201944 - | putative Mg2+/Co2+ transport protein CorA TGRD_134 203262 - 202966 - | aspartyl/glutamyl-tRNA amidotransferase subunit C TERM 186 204284 - 204296 + r 71 -6.3 -4.17657 | TTAAATTAAGATTGA CACAT TTG ATGTG TTTTAAACTATAATC TGRD_135 208302 - 205501 - | hypothetical protein TERM 187 206284 - 206266 - G 90 -9 -4.61873 | GTGCATAAAGTAAAA TTTAAGCT TGC AGCTTAAA TAAGCATCAATTTTG TERM 188 207128 - 207110 - G 73 -7.4 -4.10007 | opp_overlap 207122 ATAATTTCTTTAAAA GCGACAAA CAT TCTGCCGC TTAAGCAGTTTCCTG TERM 189 207336 - 207317 - G 72 -8 -3.72695 | opp_overlap 207331, overlap 207324 ATTGCGTTGAGCAAA GAAAAAAC CGGC GTTTTTTC CGCAGGATATCCTGC TERM 190 207342 - 207324 - G 81 -3 -5.68438 | opp_overlap 207331, overlap 207317 TGAGCAAAGAAAAAA CCGGCG TTTTTTC CGCAGG ATATCCTGCGGAAAC TERM 191 207331 - 207358 + g 95 -12.8 -3.54436 | opp_overlap 207317 207324 AGAAAAAACCGGCGT TTTTTCCGCAGG ATAT CCTGCGGAAACA TTATATCGATCTGTA TERM 192 208200 - 208190 - G 83 -2.4 -5.80003 | TTAATAAACAAAAAA GGTC TTC GTCC TCCGCTGATCAAAGC TGRD_136 211740 - 208666 - | RecB-like exodeoxyribonuclease V beta chain TERM 193 209011 - 209021 + g 72 -4 -4.93296 | opp_overlap 209011 TTTAACGTCTTCAAA GAAA AAT TTTC TTTTTGTAATCCTGA TERM 194 209289 - 209315 + g 72 -9.5 -2.71924 | opp_overlap 209311, overlap 209288 TGTTTCCCAGTAGTA CCGGAATCTCA TTATT TGAAATTCCGG ATTTCGGAGGAACTA TERM 195 210433 - 210411 - G 70 -3.4 -5.00616 | opp_overlap 210390 TTTCTTTTGAAAAAA TATCGTTGTT AAA ATCTACGATA GTCCTGCCGCTTCTA TGRD_137 212233 - 211772 - | SsrA-binding protein SmpB TERM 196 212457 - 212473 + r 81 -10.9 -2.62616 | opp_overlap 212451 212470 212472 TTGAACCTATGACCC GCGGTTT ACA AAACCGC TGCTCTACCAGCTGA TGRD_138 215506 - 214859 - | Maf-like protein TERM 197 215096 - 215119 + g 75 -5.3 -4.73912 | opp_overlap 215096 ATGTTTTCCAAAAAG CTGCTTGAG CATATT TTCAGGCAG TTTTCTCATTTTTAT TGRD_139 216459 - 215497 - | ornithine carbamoyltransferase TGRD_140 217558 - 217184 - | putative MerR family transcriptional regulator TGRD_141 217833 - 217573 - | integration host factor alpha subunit TGRD_142 218900 - 217908 - | NAD-dependent glycerol-3-phosphate dehydrogenase TERM 198 218060 - 218079 + g 84 -4.2 -5.47399 | overlap 218061 218062 TTGTGTTTTTTACGC CTTCGGCA ACCA TGCCGAGA TTTTTTTCAGCTTCA TERM 199 218061 - 218078 + g 74 -7.7 -3.87355 | overlap 218060 218062 TGTGTTTTTTACGCC TTCGGCA ACCA TGCCGAG ATTTTTTTCAGCTTC TERM 200 218869 - 218849 - G 78 -6.1 -4.87803 | overlap 218859 CATTTTCAAATAAAA GAGCAGCAA GCG TTGCTCCCC ACGAACCTGCTCCCA TGRD_143 219745 - 219146 - | hypothetical protein TGRD_144 221084 - 219759 - | GTP-binding protein EngA TERM 201 220204 - 220220 + g 79 -5.1 -5.20328 | overlap 220205 AAGTCCCATTTATTT ACGGTTA CGA TAACCGG TTTCTTTTTTTCAAG TERM 202 220205 - 220219 + g 78 -8.6 -3.7057 | overlap 220204 AGTCCCATTTATTTA CGGTTA CGA TAACCG GTTTCTTTTTTTCAA TERM 203 221156 - 221137 - R 100 -8.6 -5.84381 | opp_overlap 221137, overlap 221155 TTATTAATAAAAAAA GCCAGTCT TTAG AGACTAGC TTTTCAATTGAAAAT TERM 204 221137 - 221156 + r 74 -6.4 -4.27584 | opp_overlap 221137 221155 TTATTAATAAAAAAA GCCAGTCT TTAG AGACTAGC TTTTCAATTGAAAAT TERM 205 221204 - 221224 + r 70 -8.3 -3.31263 | opp_overlap 221200 ACTTGAACCCACGAC CTTCTCGTT GGC AACGAGACG TTCTACCACTGAACT TGRD_145 221673 - 221392 - | protein translocase subunit SecG TGRD_146 223071 - 221821 - | phosphoglycerate kinase TGRD_147 224167 - 223160 - | glyceraldehyde-3-phosphate dehydrogenase TERM 206 224395 - 224424 + H 76 -2.9 -5.5454 | opp_overlap 224398, overlap 224372 224396 AAAGCTTTTATTTAC ACAGTTTCTTTTT TGTT AAAAGGAAACAGG TTTTTATTTATTTAA TERM 207 224553 - 224530 - H 89 -8.8 -4.60258 | GCATTAAATAACAAA CGACAGAGAG AATA CGCTCTGCCG TAAGGAGATTGGTAT TERM 208 225083 - 225100 + H 71 -8.5 -3.07487 | opp_overlap 225083 225088, overlap 225082 AAAACTTTTTTAAGA CAAAGGT GAAG ACCTTTG GTTTTCAGGATATAG TERM 209 225100 - 225083 - H 71 -8.5 -3.03903 | opp_overlap 225083 225082, overlap 225088 AAAACTTTTTTAAGA CAAAGGT GAAG ACCTTTG GTTTTCAGGATATAG TERM 210 225370 - 225319 - H 77 -9.6 -3.02144 | gap 1 TGACTTTCTTTAAGA TGTTCTTTCAC-CTGTGTGCCATGT AAA ACACGGCACACAGAGAGGAAAAAAA AGAATGAATAAGATG TGRD_148 226125 - 226424 + | hypothetical protein TERM 211 226744 - 226724 - T 81 -8.4 -4.2074 | overlap 226734 226735 TGTCCAAGACAGAAA TCCCAAAA GAGGT TTTTGGGA ACAAAAACGCAGAAT TGRD_149 228389 - 228180 - | hypothetical protein TERM 212 229813 - 229798 - g 70 -3.4 -4.89393 | GAAATTGTACAAAAA TTAAAT GAGG ATTTAA TGCGTAAAAATAATT TGRD_150 229177 - 229845 + | hypothetical protein TGRD_151 229987 - 230295 + | hypothetical protein TERM 213 230344 - 230332 - f 77 -9.1 -3.33214 | opp_overlap 230331, overlap 230330 ATGCGAAGCATAAGA GGAGC GAA GCTCC GTGCGTTGTTGCCGT TERM 214 230496 - 230476 - f 93 -9.9 -4.26634 | AAAATAAGTGTAAAA CAGAAAATA ATA TATTTTCTG CGATGTCTGATGTTT TERM 215 230921 - 230932 + G 78 -5.8 -4.8667 | opp_overlap 230921 TCGCAGGGTGAAGGA CTGG GCAA CCAG TTTTTGTCGCATATA TGRD_152 230672 - 231763 + | GTP-dependent nucleic acid-binding protein EngD TGRD_153 232522 - 233577 + | rotamase surA-like protein TERM 216 233937 - 233913 - g 73 -5.7 -4.64144 | AAGAATCGTTAAAAA TGTCGGGGATA AAA TATCCGGGACA CACAGAATTGCTTGC TERM 217 234144 - 234127 - g 88 -3.5 -5.82316 | AGCAGGCAAAAAAAA CATAAAA GTTG TCTTATG CGGTTTGAATCCGCA TERM 218 234383 - 234369 - g 81 -7.2 -4.60924 | TAAACGCTGCAAAAA TAGTGA ATG TCACTA TAGGACTTCCTTTTG TGRD_154 233570 - 234526 + | 4-hydroxythreonine-4-phosphate dehydrogenase TGRD_155 234869 - 234600 - | hypothetical protein TERM 219 234950 - 234970 + r 73 -4.1 -4.91573 | opp_overlap 234950 CGCCGATTGACGCAA CAAATCATA TAT TATCATTTG TTTTTAATATCTTTT TGRD_156 235518 - 234964 - | hypothetical protein TERM 220 235801 - 235826 + H 88 -6.9 -4.95547 | gap 1, opp_overlap 235803 TTTATACCACTCACA TATTGCCACGCC TAC GGCGGGG-AATA TTTTATTATTGTAAG TERM 221 236864 - 236874 + H 79 -5.4 -5.14626 | opp_overlap 236864 TTGACAAGAAAAAAC GACA TAT TGTC TTTTGTTTTGGTACT TERM 222 237011 - 236999 - H 84 -5.5 -5.45802 | CGGCTAAAATAAAAA CGGAA AAA CTCCG GAAGCTTATATCGAG TGRD_157 237184 - 238569 + | CCA-adding tRNA nucleotidyltransferase TGRD_158 239643 - 240734 + | glutamate synthase large subunit GltB glutamine amidotransferase component TGRD_159 240731 - 242236 + | glutamate synthase large subunit GltB FMN-binding component TGRD_160 242369 - 242836 + | 4Fe-4S ferredoxin TGRD_161 242833 - 244104 + | putative NADH dehydrogenase TERM 223 244090 - 244079 - f 95 -3 -6.25741 | AAAGAACAAAAAAAA TATG GAAT CATA AAGGAGGATGTTAAT TGRD_162 244160 - 244897 + | glutamate synthase large subunit GltB uncharacterized component TERM 224 244955 - 244988 + F 95 -12.5 -3.5944 | opp_overlap 244959 AGCATTTTTTTAGAT TCAACCACTACGGAC AAAA GTCTGCGGTGGTTGA TTTGCAAATGTACGT TERM 225 245369 - 245390 + G 93 -6.6 -5.76633 | opp_overlap 245369, overlap 245354 245371 TTGGCAATTATGGAA TTCCCGAT CTTAAA ATCGGGGA TTTTTTTATGTCTAA TGRD_163 245146 - 246288 + | carbamoyl-phosphate synthase arginine-specific small chain TGRD_164 246492 - 247547 + | rotamase surA-like protein TERM 226 248451 - 248440 - f 82 -3 -5.59534 | opp_overlap 248444, overlap 248444 AATTAGAAGAAAAAA TATC TTTT GATA AAATTCAAAACTATA TERM 227 251896 - 251886 - g 88 -5.4 -5.51353 | opp_overlap 251886 TAAAAATAAGAAAAA TGAC AGT GTCA TAATTAACTGCAATC TERM 228 252408 - 252394 - g 73 -10 -2.50859 | overlap 252393 GCAAAAGAGATAGAG TGCGAC GGA GTCGCA AAGAACGGAGATGTC TERM 229 252929 - 252919 - g 74 -4.6 -4.90079 | ACCCGAATAATAAAA CCCC AAA AGGG AGTTCTTTTAAGCAC TGRD_165 250000 - 253311 + | carbamoyl-phosphate synthase arginine-specific large chain TGRD_166 253496 - 253756 + | 30S ribosomal protein S15 TERM 230 254694 - 254684 - g 73 -3.2 -5.09895 | overlap 254690 GATTCATTTAAAAAA GACA TAT CGTC GAGACTTCTCGAAAA TGRD_167 253871 - 255940 + | polyribonucleotide nucleotidyltransferase TERM 231 256259 - 256249 - g 74 -4.6 -5.04325 | opp_overlap 256247 256249, overlap 256240 GTGAAACTATAAAAA CGCC TAT AGCG GGCGTATTTTATAGA TGRD_168 256050 - 256472 + | biotin carboxyl carrier protein TERM 232 256734 - 256752 + G 74 -3 -5.37593 | opp_overlap 256734 256736, overlap 256736 TAGTTTAAAGAGAAA CAGGGAAG CCG CTGCCCTA TTTTTTGCTTTAGCA TERM 233 257049 - 257063 + G 81 -4.3 -5.40474 | CGGCGGCTGGATAGG GGATA ATCTA TATCC TTTTTTTAAAGAACT TGRD_169 256681 - 258852 + | cell division protein FtsK TERM 234 259041 - 259012 - f 76 -3.7 -5.2166 | gap 1, opp_overlap 259020 259022 259036, overlap 259020 259022 GAAGAAGCTAAAAAA GGAATATACACACT TAA AGTGTAT-TATACC CAGAGTATATTTTTT TERM 235 259994 - 259984 - f 90 -4 -5.7946 | opp_overlap 259984 259991 TCTTGAAGAAAAAAA GAAA CTC TTTC TGATTCTAAACAGAA TERM 236 260547 - 260527 - g 88 -5.4 -5.63517 | TGTTGAAAGAAAAAA TGTCTGTG CTTTT CCCAGACA TCGACGGTTTTGCAG TERM 237 260955 - 260974 + G 80 -8.6 -3.93026 | gap 1 TTGCTTTATGCTTAT CCGTCGAGT ATT AC-CGACGG TTTGATTGAAGTGTT TERM 238 261381 - 261371 - g 90 -4 -5.86976 | opp_overlap 261371 TGATAAAATAAAAAA CAAT ACT ATTG AATTTCTTGTTGAAA TGRD_170 260247 - 261566 + | hypothetical protein TERM 239 261718 - 261729 + G 73 -2.2 -5.31877 | opp_overlap 261710 TCTATAATAGTGTTT TAGC ACTA GCTG TTTTTTGTACTGCAT TERM 240 262052 - 262062 + G 95 -8.2 -4.81249 | opp_overlap 262050 GGTGATTTTAATAGC GCGC GAA GCGC TTTTTGAGTTTACGG TGRD_171 261624 - 262247 + | CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase TERM 241 262385 - 262405 + G 70 -2.5 -5.13722 | AGATTTTTGTGCTTG CTGCAATGT TTA GCATTTCGG TTTTATTTTCCTCAC TGRD_172 262240 - 262689 + | phosphatidylglycerophosphatase A TGRD_173 263980 - 262721 - | M23B family peptidase TGRD_174 264116 - 265336 + | conserved hypothetical peptidase TERM 242 265422 - 265434 + G 77 -2.7 -5.59564 | TCGGCTGGTTTGCGG GTTTT ACA AGAAC TTTTTTTGCGTTTCT TERM 243 265683 - 265723 + G 72 -9.2 -2.73441 | gap 1, overlap 265666 265662 265682 CTGCGGTGTTTTGCG GGACTTATATGTCGTGCGG CCAA TCGCAC-ATATATAAGACC GTTTCCCACGTAATG TGRD_175 265358 - 265813 + | hypothetical protein TGRD_176 265836 - 266708 + | ATP phosphoribosyltransferase HisG TGRD_177 266842 - 267717 + | SAM-dependent methyltransferase TERM 244 268198 - 268179 - g 71 -4.4 -4.88228 | gap 1, opp_overlap 268196, overlap 268181 268196 ATTCAAGAGGAAAAA TTCT-TGCT TCA AGCATAGAA AAATATACTGTTTTT TERM 245 269448 - 269438 - g 81 -4 -5.44119 | opp_overlap 269438 CGCAGGGTAAAAAAA CTTT TAA AAAG TGTCGTGGAGTTCGG TGRD_178 267974 - 269755 + | peptidoglycan glycosyltransferase TGRD_179 271892 - 273424 + | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-2,6- diaminopimelate ligase TERM 246 273621 - 273610 - g 75 -7.2 -4.26871 | opp_overlap 273609 273606 GAAGCGATTAACAAA GGCG CAGC CGCC GTAGTATGTTCAAAA TERM 247 274273 - 274287 + G 71 -7.1 -3.88498 | opp_overlap 274265 GTGAAAATTGCAATG CCTGC AAAGG GCAGG TTTAATGTGTCAAAC TGRD_180 273424 - 274824 + | UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D- alanine ligase TERM 248 274901 - 274911 + G 70 -6.8 -4.11773 | CATAACTTTCCGCGC TGGC GGT GCCA TTTTAACAAGTCTTT TERM 249 275295 - 275314 + G 71 -5 -4.6635 | overlap 275313 TCGAACCCAGAATTT GCAACGTT AGTA AACGTTCC TTTTCTTAAAGGTTT TERM 250 275313 - 275326 + G 88 -5.3 -5.68039 | overlap 275295 ACGTTAGTAAACGTT CCTTT TCTT AAAGG TTTTTTTATAAATTT TGRD_181 274824 - 275909 + | phospho-N-acetylmuramoyl-pentapeptide- transferase TERM 251 275969 - 275954 - g 91 -11.8 -4.07568 | TGGGTCTTGGCAAAA GCGGCG TTGC CGCCGC AAATCTTGCCGTAAA TGRD_182 275917 - 277242 + | UDP-N-acetylmuramoylalanine-D-glutamate ligase TGRD_183 277402 - 277737 + | 50S ribosomal protein L31 TERM 252 278170 - 278185 + G 84 -7.5 -4.55295 | opp_overlap 278156 TCCGCGCGGGAACTG GCGGC AATGAA GCCGC TTTGTTTGTAGGCGA TGRD_184 277815 - 278885 + | peptide chain release factor 1 TGRD_185 278886 - 279752 + | methylase of polypeptide chain release factors TERM 253 281567 - 281557 - f 70 -8.2 -3.31515 | overlap 281547 AAACAGCGTTTATAA CCGC TCT GCGG CTGATAAAGACAAAA TERM 254 282034 - 282015 - g 70 -3 -5.23016 | gap 1 AAACAAGTGAAAAAA CA-AAAAAC AAG GTTTTTGTG TCAACACTGCGGTTA TERM 255 282780 - 282767 - g 78 -5.3 -5.03405 | AAGAGCATATAAAAA TAGGT TTGG ACCTA CAAGTGAAATCGGAA TGRD_186 282006 - 283373 + | DNA repair protein RadA homolog TERM 256 284009 - 284028 + T 89 -8.6 -4.56597 | opp_overlap 284009 TAGAAGTATATGACA TTCTTGCG CTCT CGCAGGAA TTTTTGACGGAGCAC TGRD_187 285857 - 284508 - | biotin carboxylase TERM 257 285620 - 285609 - G 81 -7.2 -4.65895 | opp_overlap 285608 GTTTTCAGCTAAAAA CCCG TACC CGGG ATGGATTGCGTCCGC TGRD_188 286412 - 285933 - | biotin carboxyl carrier protein of acetyl-CoA carboxylase TERM 258 286145 - 286164 + g 78 -9.4 -3.51708 | overlap 286142 286141 TATTATCACCCTCTC TGACAAAC GGAG GTTTGTCA TTGCTTTGGGCGCTG TGRD_189 287078 - 286521 - | elongation factor P TGRD_190 288147 - 287095 - | aminoacylproline aminopeptidase TGRD_191 288290 - 288493 + | cold shock RNA chaperon protein TERM 259 288501 - 288551 + T 93 -10.8 -3.90922 | gap 1, opp_overlap 288503 288505 288513, overlap 288503 288504 288505 288513 AGATCTAACCTTATT AATA-CCTTAAAAGACCTCCGGA TATTTT TTTGGAGGTCTTTTAAGGATATG TTATTTAAAAACAGT TERM 260 288503 - 288549 + T 100 -13.4 -3.54488 | gap 1, opp_overlap 288503 288505 288513, overlap 288501 288504 288505 288513 ATCTAACCTTATTAA TA-CCTTAAAAGACCTCCGGA TATTTT TTTGGAGGTCTTTTAAGGATA TGTTATTTAAAAACA TERM 261 288549 - 288503 - T 77 -9.1 -3.1886 | gap 1, opp_overlap 288503 288501 288504 288505 288513, overlap 288505 288513 ATCTAACCTTATTAA TA-CCTTAAAAGACCTCC GGATATTTTTTT GGAGGTCTTTTAAGGATA TGTTATTTAAAAACA TERM 262 288504 - 288547 + T 100 -14.1 -3.34652 | opp_overlap 288503 288505 288513, overlap 288503 288501 288505 288513 TCTAACCTTATTAAT ACCTTAAAAGACCTCCGGA TATTTT TTTGGAGGTCTTTTAAGGA TATGTTATTTAAAAA TERM 263 288546 - 288505 - T 91 -13.3 -3.15574 | opp_overlap 288504 288503 288501 288505 288513, overlap 288503 288513 CTAACCTTATTAATA CCTTAAAAGACCTCC GGATATTTTTTT GGAGGTCTTTTAAGG ATATGTTATTTAAAA TERM 264 288505 - 288546 + T 100 -17.6 -2.60309 | opp_overlap 288505 288503 288513, overlap 288504 288503 288501 288513 CTAACCTTATTAATA CCTTAAAAGACCTCCGGA TATTTT TTTGGAGGTCTTTTAAGG ATATGTTATTTAAAA TERM 265 288513 - 288538 + T 78 -7.6 -4.1413 | opp_overlap 288513 288505 288503, overlap 288505 288504 288503 288501 ATTAATACCTTAAAA GACCTCCGGA TATTTT TTTGGAGGTC TTTTAAGGATATGTT TGRD_192 288998 - 288567 - | 3-dehydroquinate synthetase II TGRD_193 290080 - 288995 - | 3-dehydroquinate synthetase TERM 266 289769 - 289791 + g 73 -3.3 -5.07275 | ATCGCCGATAACTCC GCCGCCCAA AGCTA TTGCGCAGC TTTTTCTGTCTATGC TERM 267 290460 - 290450 - H 80 -2.6 -5.63517 | opp_overlap 290450 CGCCGAAATAAAAAA TAAT ATG ATTA TTCTATCTATTTTTA TERM 268 292569 - 292555 - g 81 -7.2 -4.62872 | ATCAATTCCTAAAAA TGAACT TAG AGTTCA TTGCGGTACATTACA TGRD_194 292400 - 293047 + | hypothetical protein TGRD_195 293239 - 294486 + | type I restriction-modification system substrate-binding subunit TERM 269 295365 - 295348 - f 90 -4 -5.80003 | overlap 295350 TGAAGAAATAAAAAA GACGGG CAGAGT CCCGAC AAACGGCAGTATTTT TERM 270 295363 - 295350 - f 71 -5.2 -4.51345 | overlap 295348 AAGAAATAAAAAAGA CGGG CAGAGT CCCG ACAAACGGCAGTATT TERM 271 296551 - 296541 - f 76 -2.6 -5.42862 | ATACGCGGAAAAAAA TTTT AGA AAAA CTTGAGCATGCAGGT TERM 272 296974 - 297005 + G 95 -8.1 -5.00616 | opp_overlap 296967 296980 GGGTCAAACGTCGGC GACAGAGCGGAAA ATATTG TTTCCGCTTTATC TTTTTTGCAAAGCAG TGRD_196 296932 - 297456 + | 7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase TGRD_197 297502 - 298302 + | 3-methyl-2-oxobutanoate hydroxymethyltransferase TERM 273 298330 - 298316 - g 84 -4.2 -5.4588 | opp_overlap 298328 GAAAATTATAAAAAA TGCTTC GCA GATGCA GAAAATTGCTTTAAG TERM 274 298449 - 298439 - g 72 -4 -5.03747 | AAAGTCTGTAAAAAA TGAT GAT ATCA CTATAGTATCGATTT TGRD_198 298299 - 299150 + | panthothenate synthetase TGRD_199 299151 - 300713 + | L-aspartate oxidase TERM 275 301959 - 301936 - g 100 -11.1 -4.93898 | ATATGACCAGAAAAA TTTGTCCGC TGTGCG GCGGACAAA GACTTAAAAGAGAAG TERM 276 302185 - 302169 - g 82 -10.9 -3.36569 | overlap 302167 TTAAGTTTGGAAAGA GAAAGCG GTA CGCTTTC AGGCGGAGAAGCGCA TGRD_200 300741 - 303551 + | UvrABC system protein A TERM 277 303590 - 303573 - f 79 -4.1 -5.38348 | overlap 303575 AAAAACATGAAAAAA TGCTGCC GTTA AACAGCA AGAAGTTTGAGTTTT TERM 278 304354 - 304376 + G 73 -5.6 -4.58663 | opp_overlap 304357, overlap 304357 AAGGAAGATTTGTGG AAACTTTGGC ATT GTCAAAGTTG TTTTTAGCGCATAAT TERM 279 304357 - 304373 + G 79 -7.3 -4.40963 | opp_overlap 304357, overlap 304354 GAAGATTTGTGGAAA CTTTGGC ATT GTCAAAG TTGTTTTTAGCGCAT TGRD_201 303858 - 304571 + | putative DNA alkylation repair enzyme TGRD_202 304861 - 306036 + | cytoplasmic HAD superfamily hydrolase TERM 280 306262 - 306304 + F 71 -7.4 -3.61535 | opp_overlap 306262 306263, overlap 306263 306265 TTAAAAGAATAAAAA TTATAGATATAAATTTATCA AAG TAGTAAATTTATATCTATAC TTATACTGTTTATTT TERM 281 306304 - 306262 - f 93 -7.4 -5.4593 | opp_overlap 306262 306263 306265, overlap 306263 TTAAAAGAATAAAAA TTATAGATATAAATTTATCA AAG TAGTAAATTTATATCTATAC TTATACTGTTTATTT TERM 282 306263 - 306303 + F 81 -10.9 -2.75294 | opp_overlap 306262 306263, overlap 306262 306265 TAAAAGAATAAAAAT TATAGATATAAATTTATCA AAG TAGTAAATTTATATCTATA CTTATACTGTTTATT TERM 283 306303 - 306263 - f 90 -10.9 -3.85118 | opp_overlap 306263 306262 306265, overlap 306262 TAAAAGAATAAAAAT TATAGATATAAATTTATCA AAG TAGTAAATTTATATCTATA CTTATACTGTTTATT TERM 284 306265 - 306301 + F 73 -9.1 -2.90598 | opp_overlap 306263 306262, overlap 306263 306262 AAAGAATAAAAATTA TAGATATAAATTTATCA AAG TAGTAAATTTATATCTA TACTTATACTGTTTA TERM 285 306315 - 306325 + F 76 -2.6 -5.41941 | TATACTTATACTGTT TATT TGC AATA TTTTTGTTTCCTTTC TERM 286 307058 - 307034 - g 83 -2.3 -5.95166 | gap 1 TTGAATTAAAAAAAA TTTCTGT-AC TTCGCG GTGACAGAAA AATTTTAGACGATAT TGRD_203 307006 - 307791 + | ABC transporter ATP-binding component TERM 287 308842 - 308856 + G 70 -6.4 -4.16668 | opp_overlap 308808 TTATCGGAGGCTTGC TTGCCT ACA GGGCAA TATTTTATTTCTTCC TERM 288 309129 - 309141 + G 78 -4.1 -5.27335 | CTATTGAGCATTACG GCAAT AGG GTTGC TTTTTGTTTCAAAAA TERM 289 309237 - 309247 + G 77 -8.2 -3.94664 | CTTGTACTTGTGGTA GGCG AGC CGCC TTTAGTGCTTTTGTA TGRD_204 308004 - 310574 + | lysophosphatidylglycerol synthetase TGRD_205 310571 - 311536 + | tRNA(Ile)-lysidine synthase TERM 290 312245 - 312235 - g 81 -5.4 -5.07652 | TTTGGTAAAACAAAA GCAA AAC TTGC TGTCGGTGCTTCAAA TGRD_206 311809 - 313704 + | cell division protease FtsH TERM 291 313805 - 313793 - g 88 -4.7 -5.52384 | TTTTGATGAAAAAAA GGCAC AAA GAGCC GTAAAACTTTTACTT TGRD_207 313764 - 314336 + | GTP cyclohydrolase I TERM 292 315657 - 315667 + G 70 -6.8 -4.07687 | CGTATTGCAGTTGAC CCTG GTC CAGG TTTTGGAAAAACAGT TGRD_208 314748 - 315914 + | dihydropteroate synthase TGRD_209 315914 - 316777 + | hypothetical protein TGRD_210 316779 - 318119 + | phosphoglucosamine mutase TERM 293 318565 - 318540 - f 80 -9.1 -3.53224 | gap 1, overlap 318541 CATCTTTTCGGGAAA GCGCAGACAACA AAA TGTCGTCTG-GC GAGATTTATATCTTA TERM 294 318566 - 318541 - f 72 -9.1 -2.71791 | gap 1, overlap 318540 ATCTTTTCGGGAAAG CG-CAGACAACA AAA TGTCGTCTGGCG AGATTTATATCTTAA TERM 295 318982 - 318963 - g 73 -6.5 -4.26881 | GCCCATAAAAGTAAA CTTGCAA GTATTG TTGCAAG GCTTCAAAAAGCGGG TGRD_211 318624 - 319358 + | pyridoxine 5'-phosphate synthase TERM 296 320408 - 320431 + G 82 -11.8 -2.91888 | overlap 320404 TTTAGTTGTGGTTAT TTCGCAGTCT GGCG AGACTGCGGA TACTTTGGCAGCTTT TGRD_212 319362 - 321197 + | glucosamine-fructose-6-phosphate aminotransferase TGRD_213 321542 - 321877 + | phosphopantetheinyl transferase TERM 297 322523 - 322508 - g 78 -6.8 -4.59919 | overlap 322510 AAATTATAAAAATAA TACCGG CACT CCGGCA ATGGCAACCGCGGGA TERM 298 322521 - 322510 - g 71 -7.2 -3.8772 | overlap 322508 ATTATAAAAATAATA CCGG CACT CCGG CAATGGCAACCGCGG TERM 299 322603 - 322617 + G 70 -2.8 -5.1356 | ATGATGTGTTCGAAG CTGTAA CAT TTGCGG TTTTTATTCATGGAC TGRD_214 321885 - 322739 + | putative hydroxyethylthiazole kinase TERM 300 325149 - 325137 - g 74 -4.9 -4.84311 | opp_overlap 325137 TGTTAGACAATAAAA TAATC AAA GATTA TTATGATGATTTCTT TGRD_215 323150 - 325594 + | CRISPR-associated protein Cas3 TGRD_216 325587 - 326330 + | CRISPR-associated protein Cas5 TERM 301 326989 - 326971 - g 73 -3.2 -5.08878 | AATAGATAAAGAAAA TAATATTG TGT CAAGATTA ACAGATGATAAAATT TERM 302 328308 - 328295 - g 93 -3.9 -6.01725 | AATAAAAATAAAAAA GAAAA GGAG TTTTC AAATGACACTGCTAA TGRD_217 326330 - 328327 + | CRISPR-associated protein Csd1 TGRD_218 328311 - 329162 + | CRISPR-associated protein Csd2 TGRD_219 329166 - 329804 + | CRISPR-associated protein Cas4 TGRD_220 329788 - 330822 + | CRISPR-associated protein Cas1 TGRD_221 330832 - 331122 + | CRISPR-associated protein Cas2 TERM 303 331300 - 331318 + F 87 -13.1 -2.55074 | TTTTTGTTTAGCCGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATTCCG TERM 304 331365 - 331383 + F 87 -13.1 -2.55074 | opp_overlap 331357 TATATCAGCACCCGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATTGGA TERM 305 331430 - 331448 + F 87 -13.1 -2.53876 | GCCACCTCCGCCGGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATCCAC TERM 306 331496 - 331514 + F 87 -13.1 -2.55074 | ACAACAATATGTAGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATTGCG TERM 307 331562 - 331580 + F 87 -13.1 -2.53995 | CCTAAAGCAGTATGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATCCAT TERM 308 331625 - 331613 - f 89 -7.7 -5.24129 | GCGCCCCACAAAAAA CTAGC TTT GCTAG GTCGCGCCCCGTGTG TERM 309 331628 - 331646 + F 87 -13.1 -2.55551 | CTAGCTTTGCTAGGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATTCTA TERM 310 331693 - 331711 + F 87 -13.1 -2.56046 | TATATCCATTTCTGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATTTCC TERM 311 331778 - 331756 - f 74 -6.1 -4.58085 | opp_overlap 331758, overlap 331757 331758 ACAGCGATAAACAAA GTCGCGCCC CGTGT GGGCGCGTG AATTGAAATTGCGAG TERM 312 331777 - 331757 - f 81 -9.6 -3.33766 | opp_overlap 331758, overlap 331756 331758 CAGCGATAAACAAAG TCGCGCCC CGTGT GGGCGCGT GAATTGAAATTGCGA TERM 313 331776 - 331758 - f 87 -13.1 -2.59537 | opp_overlap 331758, overlap 331757 331756 AGCGATAAACAAAGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATTGCG TERM 314 331758 - 331776 + F 87 -13.1 -2.55074 | opp_overlap 331758 331757 331756 AGCGATAAACAAAGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATTGCG TERM 315 331843 - 331823 - f 76 -9.6 -2.79175 | opp_overlap 331824, overlap 331822 AAGAAAGCCCTAAAG TCGCGCCC CGTGT GGGCGCGT GAATTGAAATTAAAA TERM 316 331824 - 331842 + F 87 -13.1 -2.55074 | opp_overlap 331823 331822 AGAAAGCCCTAAAGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATTAAA TERM 317 331910 - 331890 - f 75 -9.6 -2.65504 | opp_overlap 331891, overlap 331889 331888 GTGTTATGAAAAAGG TCGCGCCC CGTGT GGGCGCGT GAATTGAAATCGATA TERM 318 331891 - 331909 + F 87 -13.1 -2.53995 | opp_overlap 331890 331889 331888 TGTTATGAAAAAGGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATCGAT TERM 319 331976 - 331956 - f 77 -9.6 -3.06991 | opp_overlap 331957, overlap 331944 331955 CAGGACTGGTAAAAG TCGCGCCC CGTGT GGGCGCGT GAATTGAAATCCAAC TERM 320 331957 - 331975 + F 87 -13.1 -2.53876 | opp_overlap 331956 331955 AGGACTGGTAAAAGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATCCAA TERM 321 332043 - 332023 - f 75 -9.6 -2.71712 | opp_overlap 332024, overlap 332022 CTGTGTTCCTGAAAG TCGCGCCC CGTGT GGGCGCGT GAATTGAAATCCTCT TERM 322 332024 - 332042 + F 87 -13.1 -2.54193 | opp_overlap 332023 332022 TGTGTTCCTGAAAGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATCCTC TERM 323 332090 - 332108 + F 87 -13.1 -2.55253 | CGTATGCATTTCCGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATTGGT TERM 324 332147 - 332181 + F 77 -10.1 -3.02836 | gap 1, overlap 332146 332154 TTTTTTTTTCTGACC TTCAAGTCGCGC-CCC GTGT GGGCGCGTGAATTGAA ATTGTTTGCTGATTT TERM 325 332154 - 332172 + F 87 -13.1 -2.55818 | overlap 332147 332146 TTCTGACCTTCAAGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATTGTT TERM 326 332219 - 332237 + F 87 -13.1 -2.54523 | opp_overlap 332205 332204 TCGTGGCGAGTAGGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATCTAA TERM 327 332284 - 332302 + F 87 -13.1 -2.55551 | AAGCCTGCTTCTTGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATTCTA TERM 328 332351 - 332369 + F 87 -13.1 -2.53876 | GAGCCGCTCTCTCGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATAAAA TERM 329 332416 - 332434 + F 87 -13.1 -2.54523 | CTGCTATCACTTCGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATCTCA TERM 330 332483 - 332501 + F 87 -13.1 -2.55551 | TCCTCTCTCCCGAGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATTGTG TERM 331 332547 - 332565 + F 87 -13.1 -2.55253 | overlap 332540 ACCATATATTCTGGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATTGCT TERM 332 332614 - 332632 + F 87 -13.1 -2.55 | GTTGCACAGTGCGGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATCTTG TERM 333 332679 - 332697 + F 87 -13.1 -2.54523 | CTCCTCAAGCTCTGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATCTGC TERM 334 332745 - 332763 + F 87 -13.1 -2.55074 | opp_overlap 332738 332737 AGCAAAATGGGCAGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATTACA TERM 335 332831 - 332811 - f 77 -9.6 -2.99544 | opp_overlap 332812, overlap 332810 332807 AGTACCAACAACAAG TCGCGCCC CGTGT GGGCGCGT GAATTGAAATTACCA TERM 336 332812 - 332830 + F 87 -13.1 -2.55074 | opp_overlap 332811 332810 332807 GTACCAACAACAAGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATTACC TERM 337 332896 - 332876 - f 75 -9.6 -2.64416 | opp_overlap 332877, overlap 332875 CACCGCTAGTATAAG TCGCGCCC CGTGT GGGCGCGT GAATTGAAATGCTGC TERM 338 332877 - 332895 + F 87 -13.1 -2.54193 | opp_overlap 332876 332875 ACCGCTAGTATAAGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATGCTG TERM 339 332943 - 332961 + F 87 -13.1 -2.53876 | TCGTAAATTGTTGGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATCCGC TERM 340 333007 - 333025 + F 87 -13.1 -2.53876 | CGGTACAATGCCAGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATAGAA TERM 341 333072 - 333090 + F 87 -13.1 -2.56314 | opp_overlap 333067 333064 GTAGAGACTATGCGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATTTGT TERM 342 333137 - 333155 + F 87 -13.1 -2.55253 | opp_overlap 333123 AGGGTGTGAAGCGGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATTAAT TERM 343 333221 - 333201 - f 76 -9.6 -2.87146 | opp_overlap 333202, overlap 333185 333200 GGTGGCGATAATAAG TCGCGCCC CGTGT GGGCGCGT GAATTGAAATTGGCG TERM 344 333202 - 333220 + F 87 -13.1 -2.55074 | opp_overlap 333185 333201 333200 GTGGCGATAATAAGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATTGGC TERM 345 333267 - 333285 + F 87 -13.1 -2.56046 | AGTACTCTGCGAAGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATTTGA TERM 346 333333 - 333351 + F 87 -13.1 -2.55 | AGGTGCTAACTCTGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATCTTC TERM 347 333398 - 333416 + F 87 -13.1 -2.56046 | TCTAACGCCTCATGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATTTGC TERM 348 333463 - 333481 + F 87 -13.1 -2.54523 | ATTCATAGGCTGGGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATATAA TERM 349 333548 - 333528 - f 75 -9.6 -2.57211 | opp_overlap 333529, overlap 333527 ATTCCCCTTTAGAAG TCGCGCCC CGTGT GGGCGCGT GAATTGAAATGTCAA TERM 350 333529 - 333547 + F 87 -13.1 -2.54523 | opp_overlap 333528 333527 TTCCCCTTTAGAAGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATGTCA TERM 351 333595 - 333613 + F 87 -13.1 -2.55 | TATGCTTGAGTTTGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATCTTA TERM 352 333661 - 333679 + F 87 -13.1 -2.55551 | opp_overlap 333657 333648 333647, overlap 333651 ATCATTATCAATCGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATTGTG TERM 353 333727 - 333745 + F 87 -13.1 -2.54371 | opp_overlap 333720 333719, overlap 333719 AGCGAAAGCTCAAGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATGCTT TERM 354 333794 - 333812 + F 87 -13.1 -2.55074 | TTTTCATTCGGCAGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATTGCA TERM 355 333859 - 333877 + F 87 -13.1 -2.55074 | AGGAAACGCTGGTGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATTCGC TERM 356 333926 - 333944 + F 87 -13.1 -2.54523 | CTAATACGGTATGGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATCTGC TERM 357 333991 - 334009 + F 87 -13.1 -2.56314 | opp_overlap 333987 CGTTAATTATACTGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATTTGT TERM 358 334056 - 334074 + F 87 -13.1 -2.53876 | CCAAAATGCCTGAGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATCAAA TERM 359 334121 - 334139 + F 87 -13.1 -2.53876 | CATAAGATTTTTTGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATCCGC TERM 360 334188 - 334206 + F 87 -13.1 -2.53876 | opp_overlap 334185 CGCAGAAATTGACGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATCAGC TERM 361 334254 - 334272 + F 87 -13.1 -2.55074 | AGACGGTAGTTCAGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATTAAA TERM 362 334319 - 334337 + F 87 -13.1 -2.53995 | CTATTTTTTTTAGGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATCACT TERM 363 334404 - 334384 - f 75 -9.6 -2.70946 | opp_overlap 334385, overlap 334383 334381 TTCCTTGAGAAATAG TCGCGCCC CGTGT GGGCGCGT GAATTGAAATTTTAC TERM 364 334385 - 334403 + F 87 -13.1 -2.56761 | opp_overlap 334384 334383 334381 TCCTTGAGAAATAGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATTTTA TERM 365 334451 - 334469 + F 87 -13.1 -2.56046 | opp_overlap 334448 TATTATGACATACGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATTTGA TERM 366 334517 - 334535 + F 87 -13.1 -2.56314 | opp_overlap 334509 GTATATATCCTTTGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATTTGT TERM 367 334583 - 334601 + F 87 -13.1 -2.54523 | TGGCGCTGCGTAAGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATATCC TERM 368 334648 - 334666 + F 87 -13.1 -2.56314 | CGCAGGTGATTTCGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATTTCT TERM 369 334713 - 334731 + F 87 -13.1 -2.53876 | GCCACGCTGGCAGGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATCAAA TERM 370 334760 - 334747 - f 81 -8.1 -4.10672 | TGAATTGAAATCAAA CTGGC AATC GCCAG AAACTTTTCTGCAAT TERM 371 334770 - 334806 + F 74 -9.4 -3.06569 | overlap 334769 334779 CGCCAGAAACTTTTC TGCAATTGTCGCGCCC CGTGT GGGCGCGTGAATTGAA ATTTTACGGCGTTGC TERM 372 334779 - 334797 + F 87 -13.1 -2.56761 | overlap 334770 334769 CTTTTCTGCAATTGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATTTTA TERM 373 334845 - 334863 + F 87 -13.1 -2.55 | opp_overlap 334840 334836, overlap 334861 CCCAAACATATCCGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATATTC TERM 374 334911 - 334929 + F 87 -13.1 -2.53876 | ATAATATAGCCTGGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATAGCC TERM 375 334977 - 334995 + F 87 -13.1 -2.53995 | TGTTCGGCAACCGGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATAAGT TERM 376 335042 - 335060 + F 87 -13.1 -2.53876 | opp_overlap 335040 ATATTTTTATTAAGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATCCAC TERM 377 335107 - 335125 + F 87 -13.1 -2.56046 | opp_overlap 335105 335102 TTTTCAGCAACCAGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATTTAG TERM 378 335173 - 335191 + F 87 -13.1 -2.53876 | TCGCCCCCATCTAGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATCGCC TERM 379 335240 - 335258 + F 87 -13.1 -2.55074 | TCGTGCTGGTCTGGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATTCGC TERM 380 335304 - 335322 + F 87 -13.1 -2.53876 | opp_overlap 335300 GTGGCAGAGTATGGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATCAGC TERM 381 335369 - 335387 + F 87 -13.1 -2.53876 | CCACTGCTTCCTCGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATAAGG TERM 382 335454 - 335434 - f 75 -9.6 -2.70661 | opp_overlap 335435, overlap 335433 AATATATATTATAAG TCGCGCCC CGTGT GGGCGCGT GAATTGAAATCGCCC TERM 383 335435 - 335453 + F 87 -13.1 -2.53876 | opp_overlap 335434 335433 ATATATATTATAAGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATCGCC TERM 384 335501 - 335519 + F 87 -13.1 -2.54702 | GCTTTTAGGTGATGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATATAT TERM 385 335567 - 335585 + F 87 -13.1 -2.55551 | opp_overlap 335559 CTATCAACATCCCGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATTGTA TERM 386 335633 - 335651 + F 87 -13.1 -2.53876 | opp_overlap 335626 335630 ACAGCAATGAACGGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATAGGG TERM 387 335700 - 335718 + F 87 -13.1 -2.54193 | CTTATCTGCTGCGGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATCGTA TERM 388 335767 - 335785 + F 87 -13.1 -2.54371 | TCCATCATTTATAGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATCATT TERM 389 335834 - 335852 + F 87 -13.1 -2.57162 | CCCTTTACAGGCAGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATTTTT TERM 390 335921 - 335899 - f 77 -6.1 -4.68103 | opp_overlap 335901, overlap 335900 335901 TCAAGCTCAATAAAA GTCGCGCCC CGTGT GGGCGCGTG AATTGAAATAGCTCT TERM 391 335920 - 335900 - f 81 -9.6 -3.40139 | opp_overlap 335901, overlap 335899 335901 CAAGCTCAATAAAAG TCGCGCCC CGTGT GGGCGCGT GAATTGAAATAGCTC TERM 392 335901 - 335919 + F 87 -13.1 -2.53995 | opp_overlap 335900 335899 335901 AAGCTCAATAAAAGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATAGCT TERM 393 335919 - 335901 - f 87 -13.1 -2.6336 | opp_overlap 335901, overlap 335900 335899 AAGCTCAATAAAAGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATAGCT TERM 394 335966 - 335984 + F 87 -13.1 -2.53876 | GGCTTTTAGGTGAGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATAAGA TERM 395 336031 - 336049 + F 87 -13.1 -2.55551 | AATCTGCCTCATAGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATTATA TERM 396 336098 - 336116 + F 87 -13.1 -2.54523 | CTTGAAATGTTTGGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATGTAG TERM 397 336183 - 336163 - f 75 -9.6 -2.54955 | opp_overlap 336164, overlap 336162 AGAATTACCAGCAAG TCGCGCCC CGTGT GGGCGCGT GAATTGAAATGTCAA TERM 398 336164 - 336182 + F 87 -13.1 -2.54523 | opp_overlap 336163 336162 GAATTACCAGCAAGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATGTCA TERM 399 336230 - 336248 + F 87 -13.1 -2.54193 | CAATGCGTATTTTGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATCATA TERM 400 336274 - 336287 + F 79 -8.1 -4.03234 | TCATATATCCTCTCT GTGCC GATT GGCAC TTTATGTCGCGCCCC TERM 401 336295 - 336313 + F 87 -13.1 -2.56046 | overlap 336288 ATTGGCACTTTATGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATTTGC TERM 402 336361 - 336379 + F 87 -13.1 -2.54523 | CGGGCGGTGATGAGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATCTAA TERM 403 336428 - 336446 + F 87 -13.1 -2.55267 | CCATTTCGTTCCTGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATATTT TERM 404 336494 - 336512 + F 87 -13.1 -2.55253 | CCTCTGGAACCTTGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATTAGT TERM 405 336561 - 336579 + F 87 -13.1 -2.53995 | ACCTTGATTACCGGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATACCT TERM 406 336635 - 336620 - f 90 -8.2 -5.08015 | opp_overlap 336628, overlap 336616 AATCCAAAAAACAAA GGGACG GTCG CGCCCC GTGTGGGCGCGTGAA TERM 407 336628 - 336646 + F 87 -13.1 -2.53995 | opp_overlap 336620 336616 AAACAAAGGGACGGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATCAGT TERM 408 336694 - 336712 + F 87 -13.1 -2.55074 | opp_overlap 336689 336691 336692 CTGATTAAAACACGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATTACA TERM 409 336761 - 336779 + F 87 -13.1 -2.56314 | TTCATTCCTGAAGGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATTTGT TERM 410 336827 - 336845 + F 87 -13.1 -2.54702 | TCTCTCTGCTTCAGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATCTCT TERM 411 336893 - 336911 + F 87 -13.1 -2.53876 | TCAATGACACTTAGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATCCAA TERM 412 336960 - 336978 + F 87 -13.1 -2.55074 | opp_overlap 336958 336957 GCCTCTATATAAGGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATTAAA TERM 413 337026 - 337044 + F 87 -13.1 -2.55074 | GAGAAAAGCCAGAGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATTGCA TERM 414 337092 - 337110 + F 87 -13.1 -2.53876 | TTATCTTTATTCGGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATCCGC TERM 415 337157 - 337175 + F 87 -13.1 -2.53876 | CTTGTCTATTTCAGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATGCAA TERM 416 337224 - 337242 + F 87 -13.1 -2.53995 | TAGTCTGTTTTCCGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATAAGT TERM 417 337289 - 337307 + F 87 -13.1 -2.54371 | CCAGTAGCAGTAGGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATAGTT TERM 418 337354 - 337372 + F 87 -13.1 -2.53995 | GTTCAACATTGTAGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATCACT TERM 419 337421 - 337439 + F 87 -13.1 -2.55074 | TGTTGTACATCCTGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATTAAA TERM 420 337486 - 337504 + F 87 -13.1 -2.56761 | opp_overlap 337484, overlap 337479 GATTGCGATTGAAGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATTTTA TERM 421 337552 - 337570 + F 87 -13.1 -2.53876 | opp_overlap 337536 337535 TCCGCCTTGTCCGGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATGGCG TERM 422 337619 - 337637 + F 87 -13.1 -2.55818 | opp_overlap 337608 AAGCGGCGTTGGTGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATTCTT TERM 423 337685 - 337703 + F 87 -13.1 -2.55253 | opp_overlap 337683 CGCCGTGACATCAGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATTGCT TERM 424 337751 - 337769 + F 87 -13.1 -2.55074 | opp_overlap 337747 CGTGAGATATACTGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATTGAG TERM 425 337816 - 337834 + F 87 -13.1 -2.53995 | GTACAAATCCTATGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATCCAT TERM 426 337881 - 337899 + F 87 -13.1 -2.55 | TGCTCCGCCTGTGGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATATTG TERM 427 337948 - 337966 + F 87 -13.1 -2.55253 | overlap 337939 TCATTTTTTCAGCGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATTGCT TERM 428 338014 - 338032 + F 87 -13.1 -2.56046 | opp_overlap 338010 CGTGAGATATACTGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATTTCG TERM 429 338080 - 338098 + F 87 -13.1 -2.53876 | opp_overlap 338075 AGCGAAATTATCCGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATGCAA TERM 430 338147 - 338165 + F 87 -13.1 -2.54193 | TAGTCTGTTTTCCGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATAGTC TERM 431 338213 - 338231 + F 87 -13.1 -2.55551 | TGGCAGTGGTTTAGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATTGTG TERM 432 338279 - 338297 + F 87 -13.1 -2.56046 | TGCAGCTGGCGGTGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATTTGC TERM 433 338345 - 338363 + F 87 -13.1 -2.53876 | CGGGCGGTGATGAGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATCGAA TERM 434 338430 - 338408 - f 74 -6.1 -4.53047 | opp_overlap 338410, overlap 338409 338410 AGTAAAGATAATAAA GTCGCGCCC CGTGT GGGCGCGTG AATTGAAATAGGGAA TERM 435 338429 - 338409 - f 79 -9.6 -3.30201 | opp_overlap 338410, overlap 338408 338410 GTAAAGATAATAAAG TCGCGCCC CGTGT GGGCGCGT GAATTGAAATAGGGA TERM 436 338410 - 338428 + F 87 -13.1 -2.53876 | opp_overlap 338410 338409 338408 TAAAGATAATAAAGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATAGGG TERM 437 338428 - 338410 - f 87 -13.1 -2.57036 | opp_overlap 338410, overlap 338409 338408 TAAAGATAATAAAGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATAGGG TERM 438 338476 - 338494 + F 87 -13.1 -2.55551 | CTTCAGGATTAGGGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATTGTG TERM 439 338560 - 338540 - f 75 -9.6 -2.60901 | opp_overlap 338541, overlap 338539 AGAGCTGTAATTAAG TCGCGCCC CGTGT GGGCGCGT GAATTGAAATGCCGC TERM 440 338541 - 338559 + F 87 -13.1 -2.53876 | opp_overlap 338540 338539 GAGCTGTAATTAAGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATGCCG TERM 441 338606 - 338624 + F 87 -13.1 -2.55253 | TACAATTAGCTTTGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATTAGT TERM 442 338671 - 338689 + F 87 -13.1 -2.54702 | overlap 338663 TTAGCCATTGTAAGT CGCGCCC CGTGT GGGCGCG TGAATTGAAATCTGT TERM 443 338957 - 338930 - f 85 -12 -3.00574 | overlap 338925 GCATATAAAAGAGGA TTCCCCGGCTAC CAAA GCAGTCGGGGAA GAACCTCGGAAAAAT TERM 444 340955 - 340945 - g 74 -4 -5.20606 | AAATAGGAATAAAAA GAAT GAT ATTC CGTTTAACTATTATC TGRD_222 339128 - 342226 + | CRISPR-associated protein Csn1 TERM 445 342558 - 342548 - g 74 -4 -5.09173 | GAATATGGCAAAAAA TTGT AAA ACAA AAAATATGTAATCAG TGRD_223 342223 - 343119 + | CRISPR-associated protein Cas1 TGRD_224 343116 - 343445 + | CRISPR-associated protein Cas2 TERM 446 344980 - 345027 + TF 100 -9.7 -4.72272 | opp_overlap 344980 344988, overlap 344988 TCAGATGTGCTATAA TAGACAAACGCTAAATT-ATTGA AAAC TCAATTGATTTAGCGTTT-TCTA TTTTTAGTAAGCAGG TERM 447 344988 - 345020 + TF 90 -8 -5.00027 | gap 1, opp_overlap 344980 344988, overlap 344980 GCTATAATAGACAAA CGCTAAATT-ATTGA AAAC TCAATTGATTTAGCG TTTTCTATTTTTAGT TGRD_225 346265 - 345048 - | hypothetical protein TERM 448 345182 - 345192 + gF 78 -4 -5.38348 | TTATATAATTGTCTG TAAG CAG CTTA TTTTTTCCTGTTTTT TERM 449 345401 - 345389 - Gf 75 -4.9 -4.87133 | ATCTTGCAAACAAAA TTTGT TTT ACAAA ATCGCATGTTTCTTT TERM 450 346247 - 346257 + Gg 72 -4 -4.99134 | TACAGCCGAAAGTGT GTAT ATA ATAC TTTTTCATTTAAGAT TGRD_226 346245 - 346553 + | hypothetical protein TERM 451 346802 - 346786 - fH 70 -3.7 -4.84673 | opp_overlap 346786 GTAAAGAAGACAAAA TATTCTC CAT GAGCATA TTACTATTATAACAC TERM 452 347692 - 347676 - fH 81 -10.9 -2.62983 | CTCAGTGGTAGAGCA CCTCCTT GGT AAGGAGG TGGTCGCGGGTTCGA TGRD_227 347787 - 348986 + | elongation factor Tu TERM 453 349604 - 349594 - g 70 -2.6 -5.08824 | CTCGCATTGAAAAAA TTTT GTA AAAA TTGCGGCAAACGCAC TGRD_228 349489 - 349641 + | 50S ribosomal protein L33 TERM 454 349680 - 349698 + F 71 -7.4 -3.60971 | opp_overlap 349679 349678 AGCTAATGGTAAACT GCTGGTCT CCA AAACCAGC TTTGGAGGTTCAAAT TGRD_229 349756 - 349944 + | protein translocase subunit SecE TGRD_230 349957 - 350487 + | transcription antitermination factor NusG TERM 455 350869 - 350853 - g 71 -5.1 -4.68511 | overlap 350866 CCTAATAGAAATAAA GCAGGAA AAA TTACTGC GACACAGGTAGAAGA TGRD_231 350559 - 350993 + | 50S ribosomal protein L11 TGRD_232 351096 - 351779 + | 50S ribosomal protein L1 TGRD_233 351858 - 352313 + | hypothetical protein TERM 456 352707 - 352683 - g 71 -8.6 -3.24447 | opp_overlap 352683, overlap 352682 TATAGTGCAGAAAAT CAGGGAATCC GAGAG GGATTCGCTG TTTGACGAGATGAAA TERM 457 352683 - 352707 + G 75 -8.6 -3.54424 | opp_overlap 352683 352682 TATAGTGCAGAAAAT CAGGGAATCC GAGAG GGATTCGCTG TTTGACGAGATGAAA TGRD_234 352324 - 353580 + | transcription antitermination factor NusA TERM 458 355209 - 355192 - g 75 -5.7 -4.84529 | overlap 355200 CGAGAAAGGGAAAAA TTAAAGA AGCT TCTTTAA AGCCCAGACATCATT TGRD_235 353595 - 355874 + | translation initiation factor IF-2 TGRD_236 355932 - 356297 + | ribosome-binding factor A TERM 459 356474 - 356456 - g 76 -2.4 -5.44721 | opp_overlap 356457, overlap 356457 ACGATTTGAAAAAAA TTTCTGAA ATC TCCAGAAT AATTAAACAATCAAA TGRD_237 356425 - 357441 + | exopolyphosphatase-like protein TGRD_238 357533 - 358225 + | tRNA pseudouridine synthase B TGRD_239 358272 - 359189 + | riboflavin biosynthesis protein RibF TERM 460 359431 - 359455 + F 76 -4.5 -5.1764 | opp_overlap 359433 AATACGCCGGTTTAA TATTTTTTAAT AGA ATTTAAAAATA TTTTTGTATTATATA TGRD_240 359485 - 359832 + | diadenosine tetraphosphate hydrolase TGRD_241 359874 - 360080 + | 30S ribosomal protein S21 TERM 461 360821 - 360805 - g 72 -9.5 -2.72109 | overlap 360804 AAAATTGGACACAAG CCGTTTA TTC TAAACGG AAGTGATTATTCGCA TGRD_242 360154 - 361113 + | NIF3 domain protein TERM 462 361557 - 361542 - g 81 -4.6 -5.27399 | GAATATATCAAAAAA CGCGGT ATTA ATCGCG AAGCAGTAAATAAAT TERM 463 362095 - 362107 + G 72 -7.7 -3.65529 | opp_overlap 362094 362095 GAGACAGTATAGAAT GCAGA GTG TCTGC TTTACCTGAACATGT TGRD_243 361116 - 362882 + | DNA primase TERM 464 363439 - 363426 - g 81 -3.9 -5.47218 | CCGTATTGAAAAAAA CATAA ATAC TTATG AAAAAAAGTTAAAGC TGRD_244 362884 - 364605 + | RNA polymerase sigma factor TGRD_245 365436 - 364687 - | 2-oxoglutarate synthase beta subunit TERM 465 364846 - 364869 + g 88 -3.2 -5.81622 | TTTTCCGTCAATTTG GCACTGAAAA GCTT TTTTTATTGC TTTTTTTGCTTTTAT TGRD_246 366643 - 365582 - | 2-oxoglutarate synthase alpha subunit TGRD_247 366852 - 366640 - | 2-oxoglutarate synthase delta subunit TGRD_248 369704 - 369213 - | deoxycytidylate deaminase TGRD_249 369813 - 370658 + | glysiyl-tRNA synthetase alpha subunit TGRD_250 370729 - 372843 + | glysiyl-tRNA synthetase beta subunit TERM 466 373079 - 373097 + G 78 -6 -4.88258 | AAAAGTCGCAATCGG TCCGTC GATAGAA GACGGA TTTTATTATGATTTT TGRD_251 372918 - 374714 + | threonyl-tRNA synthetase TERM 467 375494 - 375526 + F 74 -9.1 -3.00774 | overlap 375523 GTCCTCACACTATTT TGGATCCATGCATTG AAC CGGCGCGTGGATCCG TATATGCTTCAAATA TERM 468 377189 - 377230 + F 73 -3.9 -5.16472 | gap 1, opp_overlap 377204, overlap 377191 377192 377204 AGAAGCAAGAAAGGT TGGCTCGTAAGGCAAGTTTT ATA AAAACTTGC-TGATGAGATA TTTTTTAGAGTTTTT TERM 469 378483 - 378467 - g 73 -2.3 -5.40474 | ATTCCGTTAAAAAAA GAAATTT TCA AAATTAC TGATAAAAGTTTAGA TERM 470 378758 - 378735 - g 80 -6.2 -4.99638 | gap 1 AGAGGGATATAAAAA TTGAAT-ATCC TTC GGATTATTCAA GTGAAATTTTAGCGG TERM 471 379234 - 379224 - g 72 -4 -4.9251 | AAGAAAAAAGTAAAA TGAA AAC TTCA AATCCGGGCATGGAA TGRD_252 378059 - 379399 + | trigger factor TGRD_253 379485 - 380096 + | ATP-dependent Clp protease protease subunit P TGRD_254 380154 - 381392 + | ATP-dependent Clp protease ATP-binding subunit X TERM 472 381808 - 381792 - g 71 -5.1 -4.67556 | opp_overlap 381792 AGAATACCTTAAAAA TGCCTGA AGT TGAGGCA ATTATGAGACAAACT TERM 473 381911 - 381897 - g 77 -10 -3.23853 | overlap 381895 TTTCTGTAAGCAACA TTGCGG ATC CCGCAA GACTTGCAGATACCA TGRD_255 381389 - 383797 + | ATP-dependent protease La TGRD_256 383797 - 384927 + | putative class V aminotransferase TGRD_257 385590 - 386954 + | amidophosphoribosyltransferase TERM 474 388429 - 388447 + G 78 -3.9 -5.252 | gap 1, opp_overlap 388415, overlap 388432 GCTTCCCGAAATTGT CGAGATGA AAAA TCATC-CG TTTTTTATAGGAGTG TGRD_258 386969 - 388549 + | CTP synthase TGRD_259 390954 - 389596 - | glucose 6-phosphate permease TERM 475 390378 - 390364 - G 70 -5.7 -4.52589 | opp_overlap 390364 GCCCGGTATATAAAA GACTG CATGC CAGTC TCCTATTGCTATACA TERM 476 390616 - 390594 - G 86 -4.2 -5.61824 | GAAAACCGAAAAAAA GATTGACT AAAGAAG AGCCAATC AGTCCGAGTGCCATA TERM 477 392282 - 392258 - g 75 -8.6 -3.54721 | opp_overlap 392263, overlap 392261 392264 CAAAATCCTATAGAA CAAGAAGGGA CATAT CCCCTTCCTG AAGCGCAGGTTGACA TGRD_260 391772 - 392758 + | MoxR-like AAA family ATPase TGRD_261 393127 - 394080 + | hypothetical protein TGRD_262 394073 - 394957 + | hypothetical protein TERM 478 395133 - 395111 - g 88 -5 -5.53288 | opp_overlap 395101 395113 395121 395123, overlap 395113 CGGAATTTAAAAAAA TACTTTTAAA TAT TTTAAAAGTT TTGAAATGTGTTTCG TERM 479 395131 - 395113 - g 82 -7.6 -4.40173 | opp_overlap 395101 395113 395121 395123, overlap 395111 GAATTTAAAAAAATA CTTTTAAA TAT TTTAAAAG TTTTGAAATGTGTTT TERM 480 395113 - 395131 + G 78 -7.6 -4.20074 | opp_overlap 395113 395111, overlap 395101 395121 395123 GAATTTAAAAAAATA CTTTTAAA TAT TTTAAAAG TTTTGAAATGTGTTT TGRD_263 394954 - 395955 + | aerotolerance-related cytoplasmic membrane protein BatA TGRD_264 396106 - 397098 + | aerotolerance-related cytoplasmic membrane protein BatB TERM 481 397721 - 397709 - g 88 -3.3 -5.81622 | overlap 397717 AGAAAACGAAAAAAA GAGGC AAA GTCTC GGCAGACAGGTTTCC TGRD_265 397095 - 398093 + | aerotolerance-related cytoplasmic membrane protein BatC TERM 482 398496 - 398553 + G 73 -9.9 -2.53125 | gap 1, opp_overlap 398498, overlap 398501 TCAAAGCGTTAAGAG TATTCCTGTCGTCGCTAATCGGCGGC AGTTATC GTCGCAGAAT-GCGGCGGCAGGAAAA GCTTTTGTAAAAGCT TERM 483 398501 - 398523 + G 73 -9.1 -3.40522 | opp_overlap 398498, overlap 398496 GCGTTAAGAGTATTC CTGTCGTCG CTAAT CGGCGGCAG TTATCGTCGCAGAAT TERM 484 399228 - 399239 + G 76 -2.2 -5.54894 | opp_overlap 399221 399223 AAAGGAAATACCTGC GGCA AGCC TGTC TTTTTTTAGTCCCTT TGRD_266 398095 - 399870 + | aerotolerance-related cytoplasmic membrane protein BatD TGRD_267 399952 - 400104 + | rubredoxin TGRD_268 400117 - 401376 + | cysteine desulfurase TERM 485 401594 - 401616 + G 86 -9.8 -4.23647 | overlap 401614 GAAATTTAAAACTTT CGGCTGTGGC GCT GCAATAGCCG TTTCTTCAATGGTTT TGRD_269 401421 - 401798 + | NifU-like Fe-S cluster assembly protein TGRD_270 401976 - 403172 + | anaerobic nitric oxide reductase TERM 486 403445 - 403408 - g 86 -6.6 -5.08601 | gap 1, overlap 403441 GTATTTGAAGAAAAA GAAGATGCTTATAAAAT GCCGG ATTTTA-AAGCAGCTTC CGATGAAACAGAAAA TGRD_271 403309 - 403752 + | putative superoxide reductase TERM 487 403852 - 403827 - f 70 -4.3 -4.66163 | gap 1 AGGGTTATGTAAAAA TAAAAA-AAACA ATA TGTTTGTTTTTA CTTAACAGTCTCTGT TERM 488 404428 - 404441 + G 74 -9.5 -3.05022 | TTGTAAGATGGAGAT GCCGC AACT GCGGC TATGTATATGAAAGC TGRD_272 403953 - 404531 + | rubrerythrin TGRD_273 405594 - 404827 - | 23S rRNA (guanosine-2'-O-)-methyltransferase TERM 489 405434 - 405449 + g 74 -4.8 -4.80453 | ACGTCGTTTTTATAT TTTTCA GATA TGAAAA TTTGTTTTATAGTCC TERM 490 405862 - 405890 + H 71 -3.1 -5.02439 | TAACTATGTTTTACC GCAGCGAAAAC TTTTAGC GGTTTCGGTGC TTTTTATGGTTATAT TERM 491 405989 - 405976 - H 79 -5.3 -5.03994 | GTTTATAGATAAAAA TAAGG AAGT CCTTA CTTGGGTTGCTATTC TERM 492 406502 - 406490 - H 71 -3.5 -5.16472 | AAAAATGGCAAAAAA TAATA GCG TATTA GGCCTTTGATGGAAT TGRD_274 408708 - 409385 + | hypothetical protein TERM 493 409407 - 409394 - f 78 -2.3 -5.72053 | GAATTAAATAAAAAA CTTGC TGAG GCATG AATAAATATAAAAGA TERM 494 410939 - 410927 - f 77 -3.5 -5.4593 | TGAAAATAACAAAAA TTTAT TGC ATAAA AATTATACTATGGAA TERM 495 412839 - 412817 - f 74 -6.4 -4.34859 | ATGAAAAGATACAAA CTGCATAT TATAAAT ATATGCAG AATAATAAATTTGTT TERM 496 416668 - 416688 + G 91 -9.9 -4.45117 | opp_overlap 416668 TTCTGAAGACAAAAA GATTTTTGA TGT TCAAAAATC TTTGTTTACCGTCTC TERM 497 416688 - 416668 - g 100 -9.9 -5.0916 | opp_overlap 416668 TTCTGAAGACAAAAA GATTTTTGA TGT TCAAAAATC TTTGTTTACCGTCTC TERM 498 416771 - 416751 - g 76 -7.5 -4.15788 | AAGCTCTTGAAGAAA TGCGCTGGC ATG ACCAGCCCA GAATTCTTCTTGAGA TGRD_275 415739 - 417334 + | DNA polymerase III subunit gamma/tau TGRD_276 417371 - 417715 + | hypothetical protein TERM 499 418673 - 418661 - g 88 -3.4 -5.95946 | GGAATAATAAAAAAA CTAC CAGGT GTAG GACATAAAATGGCGG TERM 500 418780 - 418797 + G 80 -9.9 -3.53012 | opp_overlap 418778 ACGAACGATGAAGTG TTGCAGC ATCT GCTGCAA TTTAAGCGAACACGA TGRD_277 418613 - 419209 + | recombination protein RecR TGRD_278 419321 - 419887 + | pyruvate:ferredoxin oxidoreductase gamma subunit TGRD_279 419992 - 420303 + | pyruvate:ferredoxin oxidoreductase delta subunit TERM 501 420522 - 420510 - g 71 -4.8 -4.62336 | ACGGTATTGTAAAAA GCGA GTATG TCGC GGTAGAAAGCGAACA TGRD_280 420338 - 421543 + | pyruvate:ferredoxin oxidoreductase alpha subunit TERM 502 422357 - 422369 + G 76 -7.7 -4.01564 | GAAAGCTTTGGCAGT TGACG GAC CGTCA TTTATAAATATTTTA TGRD_281 421737 - 422672 + | pyruvate:ferredoxin oxidoreductase beta subunit TERM 503 422829 - 422873 + F 100 -10.4 -4.25566 | gap 1, opp_overlap 422836 422839, overlap 422830 422836 TACACTTACAATGGA CGAGAGATAAGAGAATAGATA TTTT TATCTGTTCTCTTAT-TCTCA TTTTACATACTTCTT TERM 504 422830 - 422872 + F 90 -13.9 -3.14255 | gap 1, opp_overlap 422836 422839, overlap 422829 422836 ACACTTACAATGGAC GAGAGATAAGAGAATAGATA TTTT TATCTGTTCTCTTAT-TCTC ATTTTACATACTTCT TERM 505 422867 - 422836 - f 80 -10.4 -2.96538 | opp_overlap 422830 422829 422836, overlap 422839 ACAATGGACGAGAGA TAAGAGAATAGATA TTTT TATCTGTTCTCTTA TTCTCATTTTACATA TERM 506 422836 - 422867 + F 95 -12.6 -3.6943 | opp_overlap 422836 422839, overlap 422830 422829 ACAATGGACGAGAGA TAAGAGAATAGATA TTTT TATCTGTTCTCTTA TTCTCATTTTACATA TERM 507 422864 - 422839 - f 71 -7.7 -3.6217 | opp_overlap 422836 422830 422829, overlap 422836 ATGGACGAGAGATAA GAGAATAGATA TTTT TATCTGTTCTC TTATTCTCATTTTAC TERM 508 423739 - 423751 + G 89 -6.3 -5.34555 | CTTTTGGGTGCGTTA TCTCA TGA TGAGA TTTTTTATGATGTAA TGRD_282 422935 - 424092 + | chorismate synthase TGRD_283 424093 - 424608 + | shikimate kinase TGRD_284 424674 - 425000 + | hypothetical protein TERM 509 425014 - 425051 + F 100 -14.4 -3.81111 | opp_overlap 425020 425041, overlap 425020 425041 AATATAAGTTATTTT CCGAAATTGAGTATTG AAGCGG CAAGACTCAATTTCGG TTTGAGATTTTCTTT TGRD_285 425189 - 426172 + | acetyl-CoA carboxylase alpha subunit TERM 510 427572 - 427582 + G 73 -5.4 -4.55826 | AAATTTAAGGGCGCC GCAA ATC TTGC TTTTGATGTTTTGAA TGRD_286 426990 - 427985 + | fructose-bisphosphate aldolase TERM 511 428115 - 428059 - f 78 -7.5 -4.09685 | gap 1, overlap 428061 428106 GTTTATTCTCTAAAA TACT-TTCCGCTTTTCTTTTTCTTCC TTGCGC GGAAGAAAGAGGAAAGCGGAATAGGG ATCCGGGTAAAAACA TERM 512 428113 - 428061 - f 100 -14.5 -3.64716 | gap 1, overlap 428059 428106 TTATTCTCTAAAATA CT-TTCCGCTTTTCTTTTTCTTCC TTGCGC GGAAGAAAGAGGAAAGCGGAATAG GGATCCGGGTAAAAA TERM 513 430000 - 429987 - g 81 -9.5 -3.79787 | overlap 429967 TGACACTAATGTAAA CGCCG TGCA CGGCG GAATTAAAGAAGCTA TGRD_287 429205 - 430557 + | oxaloacetate-decarboxylating NAD-malic enzyme TGRD_288 430538 - 431377 + | fumarate hydratase alpha subunit TGRD_289 431374 - 431895 + | fumarate hydratase beta subunit TERM 514 432119 - 432102 - f 74 -2.1 -5.42198 | gap 1 CTTTAAAAAATAAAA GAAAAGTT GTC AACTTT-C ATACTGGAAAAATTC TERM 515 432179 - 432168 - f 74 -3 -5.31275 | CGGCAGGAGAAAAAA GAAA TTAT TTTC AACTATATAACCGCA TERM 516 434203 - 434217 + F 73 -4.2 -4.88918 | opp_overlap 434202, overlap 434205 AAAGCTTAAAAATGT TACGGT AAA ACCGAA TTTTGTTTCAGATGA TGRD_290 435054 - 435833 + | type III pantothenate kinase TERM 517 436210 - 436200 - f 72 -2.6 -5.23396 | opp_overlap 436200 AATAATGAAGAAAAA TTAT TTT ATAA TATCCTGATTTCTAT TERM 518 436523 - 436544 + F 85 -4.3 -5.63517 | gap 1, overlap 436524 TGGTGTATTTACGGG ACGGGTGTGG AGT CCGC-CCCGA TTTTTTATTTAAAAA TERM 519 436524 - 436543 + F 76 -7.8 -3.97026 | gap 1, overlap 436523 GGTGTATTTACGGGA CGGGTGTGG AGT CCGC-CCCG ATTTTTTATTTAAAA TGRD_291 436560 - 437108 + | translation initiation factor IF-3 TERM 520 437336 - 437323 - g 74 -4.5 -4.93333 | AACCAAAACAGAAAA GCAAG AAAA CCTGC CATAGTTACAAAATC TGRD_292 437203 - 437394 + | 50S ribosomal protein L35 TERM 521 437519 - 437506 - g 100 -5.3 -6.36459 | TGCAACAAAAAAAAA CCATT GGAG AATGG TAATCCAGCAGGTAG TGRD_293 437420 - 437767 + | 50S ribosomal protein L20 TERM 522 438101 - 438132 + F 93 -3 -6.09196 | opp_overlap 438117, overlap 438106 TGATATATCGTCTTT CAGCGGTTTAAAGA AACT TCTTTTAAAAGCTG TTTTTTTGTTTTAGC TERM 523 438167 - 438177 + F 79 -4 -5.55855 | GAATTCATTGGAGCG GTTA TAT TAAC TTTTGTTTTTTTACG TERM 524 438759 - 438792 + F 82 -3.3 -5.67283 | GCGGGTCCCGGTCGA TATAGTAAAAAAGGC TCTG GCGGTTTTTATTATA TTTTTTGTTTCAATT TERM 525 439597 - 439585 - f 72 -9.1 -2.57266 | overlap 439584 439583 ACCATAACGAAAACT GTGGC GGT GCCAC CCTGTAGAAATTTTA TGRD_294 440217 - 440501 + | hypothetical protein TGRD_295 440587 - 441606 + | phenylalanyl-tRNA synthetase alpha subunit TERM 526 442173 - 442160 - g 70 -6.7 -4.13561 | opp_overlap 442160 442159 442167 GCGGTGCAAAAAACA TTGCC GCGG GGCAA ATTGTTCCTCTTGCA TERM 527 444217 - 444206 - g 76 -4.4 -5.19916 | AAAACAGCGAAAAAA CGTT GACC AACG AAGAAGTCAATAAAG TGRD_296 441916 - 444291 + | phenylalanyl-tRNA synthetase beta subunit TERM 528 445287 - 445304 + G 74 -7.7 -3.85165 | opp_overlap 445287 AATATTTCAACTAAT GCTTCTG GAGG CAGAGGC TTTAAGTTTGGCGTA TERM 529 446025 - 445999 - g 76 -2.2 -5.55001 | opp_overlap 446001 446007, overlap 446001 446007 TAAGAAAAAATAAAA TTCCAAAATCCG GCA CGGATTTTGCTG TTCCTGAAGGGAAAC TERM 530 446023 - 446001 - g 73 -9.2 -2.89944 | opp_overlap 446001 446007, overlap 445999 446007 AGAAAAAATAAAATT CCAAAATCCG GCA CGGATTTTGC TGTTCCTGAAGGGAA TERM 531 446001 - 446023 + G 75 -9.2 -3.13403 | opp_overlap 446001 445999 446007, overlap 446007 AGAAAAAATAAAATT CCAAAATCCG GCA CGGATTTTGC TGTTCCTGAAGGGAA TERM 532 446017 - 446007 - g 73 -6.8 -4.30559 | opp_overlap 446001 446007, overlap 446001 445999 AATAAAATTCCAAAA TCCG GCA CGGA TTTTGCTGTTCCTGA TERM 533 446007 - 446017 + G 76 -6.8 -4.44797 | opp_overlap 446007 446001 445999, overlap 446001 AATAAAATTCCAAAA TCCG GCA CGGA TTTTGCTGTTCCTGA TGRD_297 444888 - 446393 + | FAD-binding oxidoreductase TGRD_298 446697 - 447119 + | hypothetical protein TERM 534 447449 - 447419 - f 76 -7.7 -4.07119 | opp_overlap 447420 447423, overlap 447417 447420 ACAAAAGAGAAAAGA TGAAGCATACAGT GTTCA ACTATATGCTTCT GTTGTATTTGATAAT TERM 535 447448 - 447420 - f 84 -11.2 -3.01831 | opp_overlap 447420 447423, overlap 447419 447417 CAAAAGAGAAAAGAT GAAGCATACAGT GTTCA ACTATATGCTTC TGTTGTATTTGATAA TERM 536 447420 - 447448 + F 75 -9 -3.51419 | opp_overlap 447420 447419 447417, overlap 447423 CAAAAGAGAAAAGAT GAAGCATACAGT GTTCA ACTATATGCTTC TGTTGTATTTGATAA TERM 537 449326 - 449308 - g 70 -6.6 -4.11216 | overlap 449318 GCGGGATGCCGAAAA GCCGCGGA AAT TGCGCAGC AAACCATGGAAGAGA TGRD_299 448393 - 449364 + | tryptophanyl-tRNA synthetase TERM 538 449737 - 449757 + G 73 -5.5 -4.63218 | TAATGAAAAAGATAT CTTAGAGGA CGA TTCTTTAAG TTTTCTTAAAAACAG TGRD_300 449492 - 450196 + | segregation and condensation protein subunit A TERM 539 451433 - 451419 - g 100 -7.2 -5.60993 | opp_overlap 451417 451415 451419 CTGTGGATAAAAAAA CTTTTC AAA GAAAAG TCTGTTTTGAAATTG TGRD_301 451176 - 451847 + | putative transcriptional regulator TGRD_302 452118 - 452903 + | hypothetical protein TERM 540 453415 - 453403 - g 81 -2.7 -5.66989 | GAAAGATCAAAAAAA GATCT TTT AAATC TGCAGCTTAAAGAAA TGRD_303 452905 - 454026 + | NlpD-like lipoprotein TERM 541 455417 - 455427 + G 74 -2.6 -5.41143 | GGGTTAAAATGTATG TAAT AGT ATTA TTTTTTTGCGGGGTA TGRD_304 455347 - 455808 + | hypothetical protein TGRD_305 455818 - 456846 + | O-sialoglycoprotein endopeptidase TERM 542 457532 - 457520 - g 70 -9.1 -3.08679 | opp_overlap 457529 GCGGTGCATGCAAGA CCTGC TTC GCAGG GACACTCCGGATTCC TGRD_306 456998 - 457960 + | putative tRNA-dihydrouridine synthase TERM 543 459209 - 459231 + G 81 -7 -4.55287 | ATAAATATCCTAATG CTGAACTTGT GCC ACAGGCTCAG TTTTATATGGGTGAA TGRD_307 458890 - 459495 + | putative lipoprotein TERM 544 461598 - 461612 + F 71 -3.5 -5.07652 | TCAATATGGGCGGTT GGACG CTTTT CGTTC TTTTCTTTTGGGAGC TGRD_308 462003 - 462965 + | 6-phosphofructokinase TERM 545 463974 - 463964 - g 78 -4 -5.27335 | TTTTTCAAAGAAAAA CATT CCA AATG ACATCGGAGAATATA TGRD_309 463035 - 464201 + | tyrosyl-tRNA synthetase TERM 546 464227 - 464254 + F 82 -5.6 -5.24551 | AACCGTGGCGCATTT TTTTGCTACTGG TTTA TCTGTAGCGAAA TTTTTGTTCCTTTCC TERM 547 464676 - 464656 - g 74 -2.5 -5.38497 | overlap 464658 ACGGAAATTAAAAAA TACGGCA CTGTTGT TGCCGTT GCCGGCGGCGTAGGC TERM 548 465169 - 465158 - g 70 -3 -5.08011 | AAAATCTTGAAAAAA TATC GGTT GATA AATTTAAATATAGTC TGRD_310 464365 - 465210 + | dihydroorotate dehydrogenase electron transfer subunit TERM 549 465438 - 465456 + G 72 -8.1 -3.59979 | gap 1, opp_overlap 465435 465436, overlap 465438 CAAAAAAATAATCTT CCC-GCCG TGTG CGGCAGGG TTTGCCCTCAGGAAA TGRD_311 465195 - 466565 + | glutamate synthase small subunit TERM 550 469323 - 469310 - g 85 -3.7 -5.64328 | overlap 469314 AACAAAAAAACAAAA GCAGC ACTT GCAGC GGATATTACTCCCAT TGRD_312 468968 - 469720 + | triosephosphate isomerase TGRD_313 470097 - 470546 + | ribose-5-phosphate isomerase B TERM 551 471267 - 471254 - g 70 -6.7 -4.13014 | TTTATATTGTCAAAA GGACA CGTT TGTCC CGTACTTTATGCGGT TERM 552 471353 - 471336 - g 81 -5.5 -5.08601 | GTACCTTAAGAAAAA CCGGAAG CAGA CTTCAGG GACATCCGGCAAAAG TGRD_314 471056 - 471880 + | transketolase TGRD_315 472000 - 472947 + | transketolase TERM 553 473926 - 473955 + F 72 -9.3 -2.54896 | TGATATACTTATTAT TACGGCGGATCAC GGAT GTGATCCGACATA TGAGTTGCATACGGA TERM 554 474238 - 474227 - g 86 -4.4 -5.68438 | opp_overlap 474227 TCAGGAAACAAAAAA GACA ATCT TGTC TTTACACGACTTTAA TGRD_316 474186 - 475031 + | purine nucleoside phosphorylase TGRD_317 475243 - 476124 + | S-methyl-5'-thioadenosine phosphorylase TGRD_318 476770 - 476264 - | putative intracellular protease TGRD_319 478455 - 477253 - | acetate kinase TERM 555 477551 - 477561 + g 79 -3.2 -5.59655 | overlap 477541 477546 CAAAGCGTTTCAAAA GCGA GTT TTGC TTTTTTGTTGCTTTC TERM 556 478086 - 478070 - G 76 -9.4 -3.40611 | opp_overlap 478068, overlap 478068 TCTACGGCAAGAATA CCGGCA TAGTG TGCCGG GGTATGTAAAGGTGC TERM 557 478473 - 478483 + H 70 -4 -4.86861 | GACGTAAAGCCTCCT CTTT TAT AAAG TTTGTTTATTTGTTA TERM 558 479606 - 479594 - H 72 -4.9 -4.77173 | opp_overlap 479578 479577 479581 TTTCTATAAAATAAA GAAAA GCT TTTTC GTAATTATTATAGAT TGRD_320 480376 - 481695 + | hypothetical protein TGRD_321 481652 - 482251 + | 5-formyltetrahydrofolate cyclo-ligase TERM 559 483355 - 483343 - g 100 -9.1 -5.00884 | ATGTTTTGTAAAAAA GCAGC GTT GCTGC ATGACATAGGCAAAG TGRD_322 482263 - 483819 + | putative HD superfamily hydrolase TGRD_323 484326 - 485564 + | exodeoxyribonuclease VII large subunit TGRD_324 485557 - 485772 + | exodeoxyribonuclease VII small subunit TGRD_325 485784 - 486677 + | geranyltranstransferase TERM 560 488510 - 488498 - g 74 -7.7 -3.84451 | GGCTTTAAATTCAAA TACGC CCT GCGTA ATAAGATACCCCAAA TGRD_326 487122 - 488966 + | 1-deoxy-D-xylulose-5-phosphate synthase TGRD_327 489760 - 490512 + | putative rRNA methylase TERM 561 490972 - 490986 + G 75 -8.6 -3.57144 | TCTTGTTATGCTTCC TTACCC TTC GGGTAA TTTACACATGGGACA TERM 562 491242 - 491260 + G 73 -2.4 -5.252 | GTGTACTCCCGAATA CTATAGAT GGA ATCAATGG TTTTTTATAAAAATG TGRD_328 490850 - 493306 + | leucyl-tRNA synthetase TGRD_329 493322 - 493855 + | putative lipoprotein TERM 563 493908 - 493897 - f 71 -3 -5.08086 | AGAAAAAATATAAAA TACT AAGA AGTA AAAAGAAGAGAATAC TGRD_330 494114 - 495103 + | peptide chain release factor 2 TERM 564 495143 - 495155 + F 77 -3.5 -5.47218 | CATTTAAAAAGTGCC TTATT TTT AATAA TTTTTTTGCATAAAA TERM 565 495163 - 495176 + F 74 -3.1 -5.28826 | TTTAATAATTTTTTT GCATA AAAT TGTGC TTTTTTATAAAGTTT TGRD_331 495237 - 495857 + | phosphatidylserine decarboxylase TERM 566 496260 - 496287 + G 73 -9 -3.29269 | overlap 496258 496254 CATAGTTCTTTTATG GGACTGCCGACG CCAG CGTCGGCGGGAC TGTTAATATCTTTTG TERM 567 496412 - 496379 - g 74 -4.7 -4.72986 | gap 1, opp_overlap 496385 GATTTTGATGAAAAA TATG-CCGGCATTTTT TAA AACAATGCCTGTCATA ATGGTGCTTTTGTCT TGRD_332 495867 - 496670 + | phosphatidylserine synthase TERM 568 497023 - 497043 + G 70 -8.4 -3.40878 | ATAACAACTAAAGGT GTGTATGA AAATG TCATACAC TGTTCTTCGGATCCT TGRD_333 496660 - 497172 + | nucleoside diphosphate kinase TERM 569 497308 - 497298 - g 80 -6.8 -4.86385 | AGTGTTAAAAAGAAA TGGC AAC GCCA ATAGAATTATTTATT TERM 570 498302 - 498280 - g 83 -9.2 -3.86015 | overlap 498282 498283 TACGTTGTTTACAAA TACCGCTGTT GAC AACAGCGACA ATACTCCATGGTGGG TERM 571 498300 - 498282 - g 78 -9.6 -3.51934 | overlap 498280 498283 CGTTGTTTACAAATA CCGCTGTT GAC AACAGCGA CAATACTCCATGGTG TERM 572 498299 - 498283 - g 78 -10.9 -2.70946 | overlap 498282 498280 GTTGTTTACAAATAC CGCTGTT GAC AACAGCG ACAATACTCCATGGT TGRD_334 497297 - 499066 + | phosphoenolpyruvate carboxykinase TERM 573 499129 - 499081 - f 100 -15 -3.94409 | opp_overlap 499081 499086 499090, overlap 499086 GATATTAGGTATAAA TAAAATAAAGAGAGCCTGGAAA GAATT TTTTCAGCCTCTCTTTATTTTA TTTGCGTTTAAAAAA TERM 574 499081 - 499129 + F 100 -17.9 -3.84451 | opp_overlap 499081 499086, overlap 499086 499090 GATATTAGGTATAAA TAAAATAAAGAGAGCCTGGAAAG AAT TTTTTCAGCCTCTCTTTATTTTA TTTGCGTTTAAAAAA TERM 575 499086 - 499124 + F 100 -13.4 -4.96468 | opp_overlap 499081 499086, overlap 499081 499090 TAGGTATAAATAAAA TAAAGAGAGCCTGGAAAG AAT TTTTTCAGCCTCTCTTTA TTTTATTTGCGTTTA TERM 576 499124 - 499086 - f 100 -10.5 -5.0065 | opp_overlap 499086 499081 499090, overlap 499081 TAGGTATAAATAAAA TAAAGAGAGCCTGGAAA GAATT TTTTCAGCCTCTCTTTA TTTTATTTGCGTTTA TERM 577 499090 - 499120 + F 100 -9.8 -4.96996 | opp_overlap 499086 499081, overlap 499086 499081 TATAAATAAAATAAA GAGAGCCTGGAAAG AAT TTTTTCAGCCTCTC TTTATTTTATTTGCG TERM 578 499217 - 499196 - f 77 -5.3 -4.86216 | opp_overlap 499196 499211 499214, overlap 499211 499214 ACAAAAAAGAATAAA TATATAGCA AAAA TACTATATA TTTTATATTGTTTTG TERM 579 501067 - 501055 - g 75 -10.5 -2.54387 | opp_overlap 501058 501063 TAAAGCTTTAACTTA CGGCG CTC CGCCG CACGGTGGTGCGGCA TERM 580 501063 - 501082 + G 76 -9.2 -3.36823 | opp_overlap 501055, overlap 501058 TAACTTACGGCGCTC CGCCGCAC GGTG GTGCGGCA TTGGGTTTTGACAGG TGRD_335 499493 - 501247 + | aspartyl-tRNA synthetase TERM 581 501287 - 501299 + F 93 -9.1 -4.64144 | overlap 501295 CAGACAGTTTTGTTG CCGGA GTA TCCGG TTTTTACGGATTCTT TGRD_336 501392 - 502852 + | HD superfamily hydrolase TERM 582 503116 - 503099 - g 76 -6.3 -4.64766 | TTTATATTTCAAAAA CTCGTTC GCAA GAACAAG CGAAAGAATACTCTA TERM 583 503237 - 503225 - g 79 -4.9 -5.23765 | TAAATAAGACAAAAA TGTTT ACC AAACA GGATAAAATATTTAA TGRD_337 502849 - 503274 + | membrane-associated hydrolase TERM 584 504395 - 504381 - T 77 -5.8 -4.8143 | CTAAGAACGCAAAAA TAAGTA AAA TACTTA AAGAGTTTACATCCT TGRD_338 508356 - 507274 - | tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase TERM 585 507738 - 507750 + g 73 -5.5 -4.62069 | opp_overlap 507738 CTCCACAATAAAAAT CCTGA CTA TCGGG TTTTTCAGCTGACGG TERM 586 510882 - 510911 + r 75 -10.1 -2.71712 | opp_overlap 510905, overlap 510879 510881 510905 ATGGAATGCTTATGC CTGCAGGTATTTT AAGA GAAAGACCTGCAG CTTTAAAAAGAGCAG TERM 587 511755 - 511729 - R 100 -11 -5.07567 | opp_overlap 511728 GTAGATCTTAAAAAA TCTTACACCGTC GGA GACAGTATAAGA GATTATTTGCTTGGT TGRD_339 512613 - 512173 - | hypothetical protein TGRD_340 513423 - 514172 + | phosphoglycerate mutase TGRD_341 514204 - 515844 + | metallo-protease FtsH TGRD_342 515866 - 516609 + | hypothetical protein TERM 588 517561 - 517549 - f 81 -7.7 -4.29907 | ATATCAGAAGAGAAA GCAAC CGT GTTGC AAACTTTTTAAATCT TERM 589 518408 - 518392 - f 71 -8.7 -3.10622 | overlap 518391 GACGGCGAAAATAAT TCCTGCG ATC CACAGGA CAAGAGGGGCGGCTT TERM 590 518978 - 518964 - g 90 -3.6 -5.86609 | CCAAAAAAACAAAAA GTAAAA TAA TTCTAC CTGAGAGTTTTGATA TGRD_343 518918 - 519919 + | phosphate acetyltransferase TGRD_344 521066 - 520242 - | metallo-beta-lactamase superfamily 1 protein TGRD_345 522112 - 521063 - | cytoplasmic M42 family peptidase TGRD_346 523551 - 522310 - | putative cytoplasmic membrane protease TERM 591 522874 - 522886 + g 84 -4.9 -5.42198 | CATTTTGAACAGACC TTTCA TCT TGAAA TTTTCTTTTTTGGCA TGRD_347 523730 - 524365 + | thymidylate kinase TERM 592 524412 - 524401 - g 74 -3 -5.27709 | TCAGAAAAAAATAAA GAAA ATAA TTTC AAATCAGGTAAAAAG TGRD_348 524366 - 525325 + | DNA polymerase III delta' subunit TGRD_349 525369 - 526175 + | PSP1 homolog protein TERM 593 526386 - 526366 - g 80 -9.1 -3.84644 | AGAAAAAAGGGGAAA TACCGCAAA AAC TTTGCGATA AGATGAGTGCAAAAT TERM 594 527136 - 527123 - g 78 -9.5 -3.52113 | opp_overlap 527131, overlap 527121 ACTTGTTGACAAATA CGGCG TTGA CGCCG CGCGATACCTTGCGG TGRD_350 526176 - 527714 + | methionyl-tRNA synthetase TERM 595 529628 - 529616 - f 72 -2.7 -5.2696 | TTAAAATGGAAAAAA CTTAA TCC TCAAG AAACAGAAAATTATT TGRD_351 530425 - 531189 + | TatD-related deoxyribonuclease TGRD_352 531436 - 532047 + | hypothetical protein TGRD_353 532037 - 532870 + | hypothetical protein TGRD_354 533749 - 533294 - | putative N-acetyltransferase TGRD_355 534469 - 533897 - | 2-oxoglutarate synthase gamma subunit TERM 596 534580 - 534598 + H 71 -7.5 -3.69621 | opp_overlap 534592, overlap 534590 CATAATTCAATGTTA GTGCTAA AATTA TTAGCAC TTTACCATTGTGAGT TERM 597 534709 - 534697 - g 70 -2.7 -5.14985 | overlap 534698 TGAAAGAGAGAAAAA CTAAG ATA CTTAA TGCCGTTATACATCA TERM 598 535275 - 535261 - g 76 -4.4 -5.20783 | AGGTAAATAGAAAAA TTATTT CAG AAATAA AAGATTTCAGACGGA TGRD_356 534657 - 535694 + | heat-inducible transcription repressor HrcA TERM 599 535916 - 535939 + G 70 -6.8 -4.1466 | GCAAGATTATTACGA TCAGCTTTTA AGGC TCAAAGCTGA TTTTGAAAATTACAT TGRD_357 535770 - 536342 + | chaperone protein GrpE TERM 600 536555 - 536520 - g 88 -8.4 -4.62471 | TGGAAGGCGGAAAAA CCACTCTTATTCCTTC GGCT GAAGGAACAACACTGG GTGGCAAGGCATTTC TGRD_358 536450 - 538315 + | chaperone protein DnaK TERM 601 538381 - 538323 - f 100 -14.3 -3.64765 | gap 2, opp_overlap 538339, overlap 538339 AAGAATAACAAGTAA GCTTTCTGTTTCATAATATCCATCCCCGC TTG ACGGGGATGGATATTATGAAT--GAAAGA AATACTTTAATTTTT TERM 602 538339 - 538367 + F 100 -17.6 -3.35679 | opp_overlap 538323 538339 CTTTCTGTTTCATAA TATCCATCCCCG CTTGA CGGGGATGGATA TTATGAATGAAAGAA TERM 603 538367 - 538339 - f 100 -18.3 -3.28712 | opp_overlap 538339, overlap 538323 CTTTCTGTTTCATAA TATCCATCCCCGC TTG ACGGGGATGGATA TTATGAATGAAAGAA TERM 604 539161 - 539133 - g 78 -9 -3.72576 | opp_overlap 539137, overlap 539137 CTTCGGTGGATGAAA TAAAGTCAGCTT ACAGG AAGCTGGCTTTA AAATATCATCCCGAC TERM 605 539157 - 539137 - g 70 -5.4 -4.49556 | opp_overlap 539137, overlap 539133 GGTGGATGAAATAAA GTCAGCTT ACAGG AAGCTGGC TTTAAAATATCATCC TGRD_359 539075 - 540226 + | chaperone protein DnaJ TERM 606 540974 - 540963 - g 74 -4.4 -5.00884 | AGTTGTTGCAAAAAA GACT GCCA AGTC AGAACCGCAGGCGGC TGRD_360 540661 - 541023 + | 30S ribosomal protein S6 TGRD_361 541020 - 541487 + | single-stranded DNA-binding protein TERM 607 541536 - 541524 - g 100 -9.1 -4.79955 | ACATTTATAAGAAAA CCTGC AGG GCAGG CAAAACCTCAAAAGT TGRD_362 541506 - 541808 + | 30S ribosomal protein S18 TERM 608 541887 - 541865 - g 100 -15 -3.15236 | GAAAGTTATATTGAA GTCCGACATT GCC AATGTCGGAC GGCAGGGCGAAATAA TGRD_363 541848 - 542297 + | 50S ribosomal protein L9 TERM 609 542932 - 542913 - g 73 -7.2 -4.13945 | gap 1 ATTTTGATTCCAAAA CGACTGGAT TTC ATCC-GTCG GAACTTGTAATCATA TGRD_364 542327 - 543697 + | replicative DNA helicase TERM 610 544214 - 544199 - g 73 -3.2 -5.07567 | CCATACTGCAAAAAA TTGTGC AGAT GCCCAA AACGAACATGACCGG TERM 611 544350 - 544368 + G 71 -7.4 -3.92542 | opp_overlap 544343 AAAATTTATTGCACA TGCCGC AAATTCG GCGGCA TTATTTAGAAATAAG TGRD_365 543706 - 544863 + | alanine racemase TERM 612 544936 - 544952 + F 71 -3.1 -5.03145 | opp_overlap 544938, overlap 544938 TGAACAACGGCGCAA TATATAA ATT TTATATG TTTTTTAACAGATTC TERM 613 546114 - 546131 + F 91 -4.1 -5.77856 | CTACAACATGGAATT GGGCATT AAGC GATGCTC TTTTTTTCATTTGTT TERM 614 546647 - 546607 - f 85 -4.2 -5.61689 | gap 2 AAAAGTAATAAAAAA GCGAAGAAACAATATGCCGC TGT GCG-CACATTATATCTT-GC CGGATATAAGCAAGC TERM 615 546903 - 546892 - g 71 -4.4 -4.83032 | AGAGCAAATACAAAA GCTT CTGC AAGC GCTAAGTGATATTTT TERM 616 547496 - 547486 - g 70 -2.6 -5.1383 | AAGAAGATATAAAAA TATT GAA AATA TTGAAAAATATATTG TGRD_366 546686 - 547813 + | coproporphyrinogen dehydrogenase TERM 617 550495 - 550482 - g 70 -5.3 -4.39998 | TATTCAGACAACAAA TTCTG ATTT CAGAA AGAATGATGGCAAGA TGRD_367 548017 - 550599 + | protein translocase subunit SecA TGRD_368 550756 - 552303 + | apolipoprotein N-acyltransferase TERM 618 552374 - 552359 - f 71 -9 -3.02745 | overlap 552356 GGCATTCAGAAACGA CGTCTG CCAG CAGACG GCAGCAATGACTGCA TGRD_369 552416 - 553435 + | DNA polymerase III delta subunit TGRD_370 553873 - 553589 - | 30S ribosomal protein S20 TGRD_371 554677 - 553934 - | thiazole biosynthesis protein ThiF TGRD_372 554882 - 554679 - | thiazole biosynthesis protein ThiS TGRD_373 555504 - 554869 - | thiamine-phosphate diphosphorylase TERM 619 555349 - 555363 + g 78 -3.6 -5.2894 | overlap 555350 TATAATTTCGCACTG TTTGAA TTT TTCAAG TTTTGTTTTATATTT TGRD_374 556607 - 555501 - | thiazole biosynthesis protein ThiH TGRD_375 557524 - 556754 - | thiazole biosynthesis protein ThiG TERM 620 556981 - 556995 + g 75 -7.2 -4.2528 | opp_overlap 556981 TCCCTGCGTCAACTA TTATCG GAG CGATAA TTTCTTCAGTTAAAA TERM 621 557581 - 557556 - H 100 -10.5 -5.45652 | opp_overlap 557556 557555, overlap 557579 ATCGGCAATAAAAAA CCCTTTAGGAA ATTT TACCTAAAGGG ATTATAAAGTACAAT TERM 622 557556 - 557581 + H 78 -10.5 -2.59683 | opp_overlap 557556 557579, overlap 557555 ATCGGCAATAAAAAA CCCTTTAGGAA ATTT TACCTAAAGGG ATTATAAAGTACAAT TGRD_376 558271 - 559026 + | hypothetical protein TGRD_377 559019 - 559600 + | nicotinate-nucleotide adenylyltransferase TERM 623 560080 - 560070 - gf 74 -2.6 -5.27938 | ATTGCGAAAGAAAAA TTTA AAA TAAA AAACAGAGATACTTT TGRD_378 559764 - 560360 + | HD superfamily hydrolase TERM 624 560655 - 560644 - gf 80 -2.2 -5.61824 | GAAAATTCAAAAAAA GACA TAAA TGCC GCAATAAAAAAACTC TERM 625 561133 - 561121 - gf 76 -2.6 -5.41746 | AACGCTTCAAAAAAA CCGC GTATG GCAG AAAAAGCGGCATGGC TGRD_379 560332 - 561357 + | hypothetical protein TERM 626 561717 - 561699 - g 71 -4.6 -4.72486 | opp_overlap 561699 TATAAACTTGAAAAA CTTTGGAA GAA TTCAAAAG TCATTGAATCGAAAA TGRD_380 561384 - 561836 + | hypothetical protein TGRD_381 563537 - 564646 + | putative cell division protein FtsW TGRD_382 564709 - 565287 + | UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase-like protein TERM 627 565666 - 565655 - gf 89 -3 -5.83226 | AATTGAAGAAAAAAA TCTT GCGA AAGA AAGCTTAAGCAATGC TGRD_383 565221 - 565787 + | UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase-like protein TGRD_384 565772 - 566524 + | 5'-nucleotidase TERM 628 567209 - 567180 - g 100 -8.1 -5.79595 | gap 1 CTGGAAAAGAAAAAA CAATAAG-TCTGCT TTT AACAGAACTTATTG CAAGCCGTTATGAGA TGRD_385 566678 - 568696 + | UvrABC system protein B TGRD_386 569081 - 569290 + | hypothetical protein TGRD_387 570160 - 570720 + | hypothetical protein TERM 629 572005 - 572023 + G 73 -3.2 -5.09895 | opp_overlap 571993 TAAGAGAGTTTTATC TCACAA TGTCTTC TTGTGA TTTTTTACCTAACTC TERM 630 572225 - 572210 - g 76 -7.6 -4.13561 | GCGTCCTAAAAAAGA TGTGGT AAGA ACCACA AGCGGTATTTCTTCT TERM 631 572903 - 572924 + G 72 -9.5 -2.7246 | opp_overlap 572903, overlap 572892 572902 CTACGGATCTAACGA TTCTTTGGC GCTT GCCGAAGAA CTTATGGGTTTTATT TGRD_388 571782 - 574085 + | cobalamin-dependent ribonucleotide reductase alpha subunit TGRD_389 574586 - 576145 + | ABC transporter ATPase component-like protein TERM 632 576686 - 576667 - f 70 -2.2 -5.25799 | overlap 576670 576679 AAAACAAGAGAAAAA TTATAAAG GCAA CTTTATTA AAAGGCGATAGCGAG TGRD_390 578234 - 578791 + | dCTP deaminase TGRD_391 578838 - 580367 + | GMP synthase TERM 633 580926 - 580912 - g 76 -2.1 -5.51353 | overlap 580913 TAAAAATAATAAAAA CGAGT TTTCC ACTCA GTCGCTTATGATGTC TGRD_392 580367 - 581251 + | ABC-type phosphate transporter phosphate-binding component TGRD_393 581412 - 582281 + | ABC-type phosphate transporter permease component TGRD_394 582278 - 583132 + | ABC-type phosphate transporter permease component TERM 634 583376 - 583387 + G 71 -4.4 -4.81551 | opp_overlap 583376 AGAATTTAAGAAAAC GCAT CGGT ATGC TTTTTGCTATGCCTA TGRD_395 583126 - 583878 + | ABC-type phosphate transporter ATPase component TGRD_396 583957 - 584712 + | ABC-type phosphate transporter ATPase component TERM 635 584929 - 584919 - g 86 -6.8 -5.14894 | AAAAAATGATAAAAA CTGC GAT GCAG GAGCTTGTCGAAAGA TGRD_397 584837 - 585514 + | phosphate uptake regulator PhoU TERM 636 586170 - 586158 - g 79 -3.4 -5.47399 | GTAAGTCCAAAAAAA CAAG AGGAA CTTG ATAAAAAGTTTGAAA TGRD_398 586128 - 586538 + | peptidyl-tRNA hydrolase-like protein TERM 637 586788 - 586798 + G 70 -5.4 -4.40561 | TTTCAGACTATTCTG CAGA GTT TCTG TTATTTTTGAAAAAG TERM 638 586863 - 586853 - g 88 -5.4 -5.58522 | opp_overlap 586822 GATATAAAAGAAAAA GACA GAT TGTC GTCACCCAAAAATGT TGRD_399 586538 - 587227 + | DNA repair protein RadC TERM 639 587555 - 587542 - f 91 -2.4 -6.20267 | TCAAAAAGAAAAAAA TCCA TTGGCT TGGA AAAATTGGTGTTATA TGRD_400 587717 - 588160 + | hypothetical protein TERM 640 589143 - 589174 + F 71 -3.1 -5.0809 | opp_overlap 589143, overlap 589137 AGTTTTATTGTGAAA GTGTTAGATCTGG AGAATA TCAAATTTAACAC TTTTTCTGATTTATT TERM 641 589979 - 589998 + F 70 -2.2 -5.27477 | opp_overlap 589979, overlap 589968 TGGGTAAATTGAAAA TTTATGAT TATG ACCATAAA TTTTTTAATTCAGGT TERM 642 590704 - 590690 - f 83 -5 -5.40072 | CTTTTGGGAAAAAAA TAACTG CCG CAGTCA AGTTATCAAGGTGAT TERM 643 590861 - 590849 - f 83 -4.9 -5.5762 | AGGAAATAGAAAAAA TAAGT ATA ACTTA GAGAGAAGTAAAAAG TERM 644 591454 - 591440 - f 77 -5 -5.15969 | CCGCAAGGTAAAAAA CCACAT GCT ATGTAG AATAATTTAGTGAAC TERM 645 591623 - 591593 - f 77 -5.4 -4.98128 | AGAAGTAAAAAGAAA TTGTGGGCAGAGCT GGA AACTCTATCCGCAA ATGTAATAGGGCATA TERM 646 591665 - 591707 + F 89 -11.1 -3.5834 | gap 1, opp_overlap 591671 591690, overlap 591663 591671 AAGAATAAGAATATT GAGTAA-TTGTTATTTATTT AAGT AAGTAAATAACAATTTACTC TGTTGATTTTTTATT TERM 647 591671 - 591700 + F 82 -8.9 -3.94936 | opp_overlap 591671 591690, overlap 591665 591663 AAGAATATTGAGTAA TTGTTATTTATTT AAGT AAGTAAATAACAA TTTACTCTGTTGATT TERM 648 593398 - 593414 + G 78 -9.5 -3.5882 | ATAGATTTTTGCATG TCTCTGA ACT TCAGAGA TTTGGGGCTGATATA TGRD_401 592395 - 593651 + | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 649 593913 - 593929 + F 93 -8 -5.52986 | GACTGAATAAATGGT GCCTTG AAAAA CAAGGC TTTTTTTGATAGAAT TERM 650 594004 - 594024 + F 95 -12.7 -3.57561 | CGAATTTGCCAGGGT CCCCAAAAT TAA ATTTTGGGG TTTAGGAGATTGAAG TGRD_402 594125 - 594859 + | 30S ribosomal protein S2 TGRD_403 594889 - 595485 + | translation elongation factor Ts TERM 651 595807 - 595773 - g 72 -9.5 -2.74078 | gap 1, opp_overlap 595772 595773 ATGAAATCAAATTTA TTTTCAGCA-AACGGC GTAA GCGGTTTTGCTGAAAA CTTTAACAGAGAAAA TERM 652 595773 - 595807 + G 72 -9.5 -2.71712 | gap 1, opp_overlap 595773, overlap 595772 ATGAAATCAAATTTA TTTTCAGCA-AACGGC GTAA GCGGTTTTGCTGAAAA CTTTAACAGAGAAAA TGRD_404 595488 - 596189 + | uridylate kinase TGRD_405 596190 - 596750 + | ribosome recycling factor TGRD_406 596772 - 596945 + | 4Fe-4S binding protein TGRD_407 596956 - 597630 + | undecaprenyl pyrophosphate synthetase TERM 653 597854 - 597866 + G 73 -5.5 -4.58424 | AGCGTGCATATACAG CGGGA ATA TTCCG TTTTATGTAATGATG TGRD_408 597789 - 598586 + | phosphatidate cytidylyltransferase TERM 654 598974 - 598961 - g 73 -6.7 -4.33281 | ATTGCAAATAAAGAA GCCAT TGTT ATGGC AGGAAGTTATATAAT TGRD_409 598583 - 599740 + | 1-deoxy-D-xylulose 5-phosphate reductoisomerase TERM 655 600838 - 600824 - g 76 -5.8 -4.6709 | TAAAAGCATATAAAA TTTTTG CTT CAAAAA GAAATTATCCTCTTC TGRD_410 600253 - 601335 + | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase TERM 656 601807 - 601794 - g 70 -2.5 -5.10933 | GCAGGCAAAACAAAA TTTAA AATA TTAAA AATTTCAAGATATCA TGRD_411 601356 - 601832 + | transcription elongation factor GreA TERM 657 603513 - 603500 - g 76 -2.3 -5.49729 | overlap 603490 AATCAGCGAAAAAAA TCTCG CAAA CGGGA ACGTAGAATTAAAAG TERM 658 603557 - 603537 - g 72 -8.3 -3.56375 | TTAAAAGCAAGAAGA GACGGCA AAGATGA TGCCGTC AGGCTTTTCAAACCG TGRD_412 601905 - 603614 + | prolyl-tRNA synthetase TERM 659 604118 - 604104 - gf 76 -2.1 -5.48303 | overlap 604112 ATAATTGCAAAAAAA GACAA AAATA TTGCC AATATTAGAAAAGGG TERM 660 604122 - 604112 - gf 77 -2.6 -5.44837 | overlap 604104 AAAAAAAGACAAAAA TATT GCC AATA TTAGAAAAGGGATGG TGRD_413 603840 - 605204 + | glycine cleavage system L protein TERM 661 606189 - 606173 - gf 89 -5.9 -5.30616 | overlap 606174 CTATTGAAACAAAAA CCTATCA AAA TGATAGA GGCGGAAAAGGAAGC TERM 662 606188 - 606174 - gf 70 -7.2 -3.77285 | overlap 606173 TATTGAAACAAAAAC CTATCA AAA TGATAG AGGCGGAAAAGGAAG TGRD_414 605155 - 606285 + | adenine-specific DNA methylase TERM 663 608791 - 608807 + F 81 -5.9 -4.90296 | opp_overlap 608791 CAGATAATATCAGAA CTCAAAA ATA TTTTGGG TTTTTATACAATTTT TERM 664 609521 - 609508 - f 76 -3.9 -5.38549 | TGGAAAGAAGAAAAA CTTAA TGAG TTAAG CCCACGAACAAAAAA TERM 665 610786 - 610773 - g 76 -3.1 -5.41787 | GAAAAAAGATAAAAA CAGTT ACTA AACCG TTTTATAAGAAACAA TGRD_415 609743 - 610807 + | glycine cleavage system T protein TERM 666 610837 - 610795 - f 87 -11.7 -3.30635 | opp_overlap 610790 610789 610799, overlap 610799 TAAACCGTTTTATAA GAAACAAAAATGAAAAAAT TAGTT ATCGTTTCATTTTTGTTTC TTGCAGTTGTTGTGC TERM 667 610833 - 610799 - f 74 -6.7 -4.30719 | opp_overlap 610799 610790 610789, overlap 610795 CCGTTTTATAAGAAA CAAAAATGAAAAAAT TAGTT ATCGTTTCATTTTTG TTTCTTGCAGTTGTT TERM 668 612090 - 612079 - f 74 -2.2 -5.40474 | AGCTGTGCAAAAAAA TGGC AGTT ACCA CACAACCCATGAGGA TGRD_416 612238 - 612537 + | hypothetical protein TERM 669 612865 - 612843 - f 82 -4.3 -5.40014 | gap 1, opp_overlap 612843, overlap 612837 AAAGAATAATAAAAA GTT-TAATGC GGGG GCATTACAAC TGGCTTAAAGATTGC TGRD_417 612877 - 613212 + | hypothetical protein TERM 670 614228 - 614208 - g 74 -3.9 -5.09225 | ACTGGACTGAAAAAA GAGCTGTTT TGC ATACGGCTC TCAGAAATAGAAGCA TGRD_418 613928 - 615571 + | glucose-6-phosphate isomerase TERM 671 615587 - 615569 - f 79 -3.8 -5.4756 | opp_overlap 615571, overlap 615571 AATTCCAACAAAAAA TAGCTGCA TAA TGCAACTC TTGAAACAGAATTAT TERM 672 615585 - 615571 - f 74 -6.4 -4.36592 | opp_overlap 615571, overlap 615569 TTCCAACAAAAAATA GCTGCA TAA TGCAAC TCTTGAAACAGAATT TGRD_419 615579 - 616631 + | hypothetical protein TGRD_420 616698 - 617126 + | transcription antitermination factor NusB TERM 673 617127 - 617117 - f 86 -2.6 -5.85011 | GAAAAATCAAAAAAA TTTA GAA TAAA AAGTTTGTACGCCGT TERM 674 617752 - 617772 + G 77 -8.3 -3.84246 | opp_overlap 617750 617752 TTAAATGAGGAAATA CTTATGTCC GTA GGACAAAAG TTTGCTAATTCCAGA TERM 675 617772 - 617752 - g 72 -8.3 -3.52909 | opp_overlap 617752, overlap 617750 TTAAATGAGGAAATA CTTATGTCC GTA GGACAAAAG TTTGCTAATTCCAGA TERM 676 617837 - 617820 - g 88 -3.3 -5.80817 | overlap 617821 TTTAAGACAAAAAAA TCCGCAG ATTA CGGCAGA AAGAAAACTCCGCTT TERM 677 618113 - 618101 - g 83 -6.2 -5.07523 | GATATACAAATAAAA GCCC TAGAT GGGC TATAGCATTTAAGTT TGRD_421 617185 - 619209 + | DNA ligase (NAD+) TGRD_422 619283 - 619999 + | ribosomal large subunit pseudouridine synthase C TERM 678 621105 - 621064 - g 82 -7.5 -4.42062 | opp_overlap 621078, overlap 621040 621065 621066 621078 GATTTGGTAAACAAA GCTTTCGGGAAAAATTTCT TTAA AGAAATTTTTCCTGAAATT GACCCGACGATTCAG TERM 679 621104 - 621065 - g 80 -11 -3.24755 | opp_overlap 621078, overlap 621040 621064 621066 621078 ATTTGGTAAACAAAG CTTTCGGGAAAAATTTCT TTAA AGAAATTTTTCCTGAAAT TGACCCGACGATTCA TERM 680 621103 - 621066 - g 93 -14.5 -2.54371 | opp_overlap 621078, overlap 621040 621065 621064 621078 TTTGGTAAACAAAGC TTTCGGGAAAAATTTCT TTAA AGAAATTTTTCCTGAAA TTGACCCGACGATTC TGRD_423 620134 - 621186 + | hypothetical protein TGRD_424 621271 - 621894 + | hypothetical protein TERM 681 621926 - 621913 - f 72 -2.5 -5.31072 | opp_overlap 621907, overlap 621904 621902 621916 AGAATATAATAAAAA TATTT TATT AAATA ATAAATAACAAGGAT TERM 682 622202 - 622186 - g 74 -5.1 -4.84262 | CAATAAGGAACAAAA CTGATCA TAT TGAGCAG TTAAAACGTCACGGG TERM 683 623049 - 623033 - g 88 -5.2 -5.63374 | opp_overlap 623033 TCAAGAGGAAAAAAA TTCTGT TGAAT ACAGAA TAATGTCTCATGGGA TGRD_425 621948 - 623504 + | bifunctional purine biosynthesis protein PurH TGRD_426 624277 - 625104 + | lipoyl synthase TERM 684 625660 - 625621 - f 79 -8.7 -3.85698 | gap 1, overlap 625623 625625 625627 625655 TGTGTCCGCCAGAAA CACACAGTCTGTGGCTGT CAGAT ACAGCCACAGAC-GTCCA GAAGATGGTCGAGAC TERM 685 625658 - 625623 - f 89 -11.3 -3.51934 | gap 1, overlap 625621 625625 625627 625655 TGTCCGCCAGAAACA CACAGTCTGTGGCTGT CAGAT ACAGCCACAGAC-GTC CAGAAGATGGTCGAG TERM 686 625656 - 625625 - f 93 -13.9 -3.3353 | gap 1, overlap 625623 625621 625627 625655 TCCGCCAGAAACACA CAGTCTGTGGCTGT CAGAT ACAGCCACAGAC-G TCCAGAAGATGGTCG TERM 687 625655 - 625627 - f 100 -17.6 -3.23335 | overlap 625625 625623 625621 CGCCAGAAACACACA GTCTGTGGCTGT CAGAT ACAGCCACAGAC GTCCAGAAGATGGTC TERM 688 626270 - 626256 - f 71 -6.4 -4.11141 | GCTGATATAAAAAGA CAAGGT ATT ACCTCG ATTAAATCAATGGAT TERM 689 627807 - 627817 + G 75 -5.4 -4.86033 | opp_overlap 627803, overlap 627803 TTTGTCAAAGATGAG GAAC TCA GTTC TTTTTATGACGATTT TERM 690 628588 - 628576 - g 81 -2.7 -5.63236 | ATGTAAAAATAAAAA TTTAC TGT GCAAA CGATAGCGACCGCGA TGRD_427 627663 - 630809 + | transcription-repair coupling factor Mfd TGRD_428 632099 - 632641 + | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase TGRD_429 632662 - 633198 + | hypothetical protein TGRD_430 633290 - 633877 + | hypothetical protein TGRD_431 633874 - 634593 + | yhbG family ABC transporter ATPase component TGRD_432 635078 - 635536 + | nitrogen regulatory protein PtsN TGRD_433 636368 - 637231 + | hypothetical protein TGRD_434 637498 - 637908 + | PTS mannose/fructose/N-acetylgalactosamine- specific component IIA TGRD_435 637995 - 638498 + | PTS mannose/fructose/N-acetylgalactosamine- specific component IIB TERM 691 638607 - 638593 - f 81 -5.8 -4.87318 | opp_overlap 638580 638592 CGGAAAACTTAAAAA GTTTTA TTT TAAAAC GATTATAAATGGATA TGRD_436 638626 - 639273 + | PTS mannose/fructose/N-acetylgalactosamine- specific component IIC TGRD_437 639266 - 640042 + | PTS mannose/fructose/N-acetylgalactosamine- specific component IID TGRD_438 640065 - 640328 + | phosphocarrier protein HPr TERM 692 640388 - 640401 + G 73 -2.3 -5.26119 | overlap 640395 GCATCACCGGGAATT GCCAT TGGA AAGGC TTTTCTTTTTGAAAA TGRD_439 640337 - 642073 + | phosphoenolpyruvate-protein phosphotransferase PtsI TERM 693 642229 - 642217 - f 70 -4.1 -4.66987 | CATATTTTAATAAAA GGAAA AAC TCTCC GGCGAGCAAACCGCG TERM 694 642366 - 642352 - g 73 -8.6 -3.33087 | AATATACTGGGACAA TTTCCC GCA GGGAAA TGAAAGATCAGATTC TERM 695 643084 - 643066 - g 74 -3.8 -5.1764 | TACACAACATAAAAA TCGGCGAT ACG ATTACCGA AAGCGAAAATCCAAC TGRD_440 642261 - 644048 + | membrane GTPase LepA TERM 696 644261 - 644245 - g 72 -8.1 -3.60296 | opp_overlap 644245 644243 CATCGCTATCGCAAA GACTTTT TAA AAAAGTC TATTCATGGCTTGAT TGRD_441 644148 - 644921 + | signal peptidase I TGRD_442 644918 - 645337 + | hypothetical protein TGRD_443 645437 - 646357 + | putative membrane protease subunit HflC TERM 697 646332 - 646358 + F 84 -5.2 -5.42164 | opp_overlap 646337 TGTTTAAAGATACAC CTAAATTAGCAA AAG TTGCTAAGTAAG TTTTTATTGTTTCTC TERM 698 646353 - 646337 - f 75 -8.1 -3.77209 | opp_overlap 646332 AAAGATACACCTAAA TTAGCAA AAG TTGCTAA GTAAGTTTTTATTGT TERM 699 646474 - 646463 - f 76 -4.4 -5.08011 | opp_overlap 646463 AAAACCTCGAAAAAA GCAA GAAG TTGC ATTTTTTAATTGTTT TGRD_444 647920 - 648435 + | cob(I)alamin adenosyltransferase TERM 700 648971 - 648960 - g 71 -4.4 -4.86216 | opp_overlap 648960 AGAAAAAATAATAAA TGCT GCAA AGCA TTCGATAGAAGAAGT TGRD_445 648547 - 649377 + | ABC-type cobalamin transport system periplasmic component TERM 701 649639 - 649628 - g 73 -2.2 -5.27779 | GGCAATATTAAAAAA TCCG CTGG CAGA TCCCTTTACTTTAGG TERM 702 649969 - 649992 + G 75 -5.4 -4.84918 | TTCCGTTTATTACTG TTGTTGTGCT TATA AGCATAATAA TTTTGTCTTTATCGG TERM 703 650216 - 650237 + G 80 -2.1 -5.77853 | overlap 650217 TGTAATTTTGATACC GGCTTCAGC TTTT GCCGGAGCG TTTTTTTTACCGCTT TGRD_446 649377 - 650369 + | ABC-type cobalamin transport system permease component TERM 704 650388 - 650375 - f 83 -8.1 -4.39746 | TAGAAAATAAAAAGA GCGGT ATTG ACCGC AAACTAAACGGCAAG TGRD_447 650425 - 651210 + | ABC-type cobalamin transport system ATPase component TGRD_448 651935 - 651375 - | putative membrane-associated phospholipid phosphatase TERM 705 651580 - 651570 - G 78 -6.8 -4.65446 | AGTACATATAGAAAA CGCA ATT TGCG CATGTCCTGACGGAA TERM 706 653263 - 653280 + H 75 -4.9 -4.88918 | opp_overlap 653263 ATAAGAATAGCAAAT TTTGATC AAAC GGTCAAA TTTTATTTAAAATAA TGRD_449 653434 - 653724 + | hypothetical protein TERM 707 654266 - 654285 + F 70 -2 -5.27023 | overlap 654268 TTATGTGGAAGTGTA GAGCCGCT CAAA AGCGACTA TTTTCTTTTTAAAAT TERM 708 656341 - 656378 + G 87 -11.7 -3.52204 | opp_overlap 656349, overlap 656337 656342 TAACTCCGTATCGCA GCTTAATATGTTTTATA ATGA TATAAAACATATTAAGG TTGGTTTAAGAATAA TERM 709 656342 - 656377 + G 95 -15.2 -2.71001 | opp_overlap 656349, overlap 656341 656337 AACTCCGTATCGCAG CTTAATATGTTTTATA ATGA TATAAAACATATTAAG GTTGGTTTAAGAATA TGRD_450 656024 - 657130 + | carboxynorspermidine decarboxylase TGRD_451 657148 - 658365 + | putative saccharopine dehydrogenase TERM 710 658390 - 658427 + T 100 -9.3 -5.99154 | opp_overlap 658390 ATCTCAACTTTTAAA GCAGTCTGGATTTTTTA AACT TTAAAATTTCAGACTGC TTTTTTTATTTAATA TGRD_452 659782 - 658754 - | aspartate-semialdehyde dehydrogenase TERM 711 659649 - 659680 + g 91 -9.6 -4.64846 | opp_overlap 659648 659649 CCTTTATATATCAAT TTTTTGCCTACGGA ACGT TCCGTAGCTAAAAA TTTTATGCTTTCTAC TGRD_453 660923 - 659862 - | 3-isopropylmalate dehydrogenase TERM 712 660011 - 660034 + g 75 -9.6 -3.28708 | opp_overlap 660014 CGCCGATTTTTTCAA GCATCATTGC ACCT GCATTGATGC TTGCTATGGGGTTTA TGRD_454 661459 - 660968 - | 3-isopropylmalate dehydratase small subunit TGRD_455 662940 - 661678 - | 3-isopropylmalate dehydratase large subunit TERM 713 662766 - 662782 + g 76 -2.3 -5.54885 | opp_overlap 662763, overlap 662767 TAACTAAAGCTATTT TGTTTTT ATC AAAAACC TTTTTTATTCCTGTT TGRD_456 664494 - 662944 - | 2-isopropylmalate synthase TERM 714 663094 - 663084 - G 70 -6.8 -4.17048 | CTGCTTTTAAAACAA CCTC TCC GAGG GCATCTTCTCCTGAA TERM 715 664679 - 664642 - R 72 -2.9 -5.35459 | gap 2 ATATATTATAAAAAA TTTGCGACATTCGGCAT TGACCC ATACCG--TGCCGCAAA TTTTCTTTTACAATA TGRD_457 666949 - 665825 - | stage II sporulation-related protein TERM 716 667080 - 667095 + r 74 -6.2 -4.57353 | TTTTGTTTAGTGATT TATTGC AACC GCAATA TTTTATATAATACCC TERM 717 667502 - 667514 + r 77 -5.5 -5.02074 | opp_overlap 667502 TTCACTTCACAAAAG CTCTC TTT GGGAG TTTTTTGGAGGATCA TGRD_458 668515 - 667493 - | Holliday junction resolvasome helicase subunit RuvB TGRD_459 668911 - 668561 - | hypothetical protein TERM 718 669072 - 669086 + r 76 -4.2 -5.1861 | ATCGACGTCTGAACC CTTGGG TAG CGCAAG TTTTTTGGTCATGGA TGRD_460 669920 - 669306 - | Holliday junction resolvasome DNA-binding subunit RuvA TERM 719 669426 - 669450 + g 82 -6.5 -4.9755 | opp_overlap 669425, overlap 669428 CAAAGTTATAAGACC TGCTATGGCTT CCG AAACCATAGTA TTTTTAATTGTCTCT TERM 720 669428 - 669448 + g 73 -6.9 -4.09586 | opp_overlap 669425, overlap 669426 AAGTTATAAGACCTG CTATGGCTT CCG AAACCATAG TATTTTTAATTGTCT TGRD_461 670520 - 669948 - | crossover junction endodeoxyribonuclease RuvC TGRD_462 671298 - 670543 - | hypothetical protein TERM 721 670856 - 670866 + g 78 -5.4 -5.06103 | ATTACGATTTCTTCG TCTG CGG CAGA TTTTTTGACAGTTAT TGRD_463 671790 - 671374 - | F0F1-type ATP synthase epsilon subunit TERM 722 671815 - 671833 + r 74 -3.2 -5.30575 | overlap 671817 671826 CTTAAATTTATTTAT TTTTCTTA TTT TAAGAATA TTTTTTAGATTTTTC TGRD_464 673237 - 671825 - | F0F1-type ATP synthase beta subunit TGRD_465 674085 - 673240 - | F0F1-type ATP synthase gamma subunit TGRD_466 675601 - 674060 - | F0F1-type ATP synthase alpha subunit TERM 723 675067 - 675078 + gr 76 -5.8 -4.62783 | TTATTATAGTGTCAA CTGC TATC GCAG TTTTTCCCGTACCTC TGRD_467 675954 - 675598 - | putative F0F1-type ATPase delta subunit TGRD_468 676444 - 675935 - | F0F1-type ATPase subunit B TERM 724 676037 - 676065 + g 90 -4 -5.84381 | gap 1, opp_overlap 676045 TTTTGACATAACTTT TCCGGAA-ATATC TACG GATATTTTCCCGA TTTTTTTATTCATAC TGRD_469 676670 - 676464 - | putative F0F1-type ATPase subunit C TGRD_470 677422 - 676667 - | F0F1-type ATPase subunit A TERM 725 677703 - 677667 - R 82 -7.5 -4.57569 | overlap 677651 677697 CGACTGTGTTAAAAA TTAGTAATTTTTATCCC GCC GGAATCATAATTACTAA AGTAAAAACATACCG TGRD_471 678661 - 678005 - | lipoate-protein ligase A-like protein TGRD_472 678935 - 678645 - | 6-O-methylguanine-DNA methyltransferase-like protein TERM 726 678896 - 678927 + g 100 -13.2 -4.98616 | opp_overlap 678894, overlap 678899 ATATTTTAAAGCACG CTTTCCAGACTTTT ACGT AAAAGTCTGGATAG TTTTTCATCTTTTCA TERM 727 678899 - 678924 + g 95 -13.5 -3.33169 | opp_overlap 678894, overlap 678896 TTTTAAAGCACGCTT TCCAGACTTTT ACGT AAAAGTCTGGA TAGTTTTTCATCTTT TGRD_473 680357 - 679059 - | excinuclease ABC subunit C TERM 728 679528 - 679545 + g 74 -2.8 -5.33921 | overlap 679518 ATTACCGCCGGCTGG TGTTTT AATCTC AAAACA TTTTTTAATTCGTTT TERM 729 680317 - 680333 + g 87 -2.3 -5.98675 | overlap 680318 TAAACCCCGGGAAGT TTTGGAA TAT TTTCAAG TTTTTTATTTTTATG TGRD_474 681920 - 680379 - | cytoplasmic membrane protein MviN TERM 730 681321 - 681309 - G 79 -6.9 -4.45201 | overlap 681294 CTGTATAAAAAAATA CAGCG CTC CGCCG GCAACAATGCTTACG TERM 731 681783 - 681764 - G 70 -6.4 -4.10925 | ATAGACGTCTGAAAA GGCTTGGA ATTT TCAAAGCC GCATAAAAAGCATCG TERM 732 681814 - 681793 - G 100 -14.5 -4.86033 | AAAGCCGCATAAAAA GCATCGGCA GACA TGCCGATGC CGAATAAATTAGCGA TGRD_475 685623 - 684724 - | tRNA delta(2)-isopentenylpyrophosphate transferase TERM 733 685285 - 685297 + g 93 -7.7 -5.1361 | opp_overlap 685284 685285, overlap 685269 CCCGCCTGTTACAAC GGGAA CTT TTCCC TTTTTTAAAATTTCT TGRD_476 687583 - 685796 - | DNA mismatch repair protein MutL TERM 734 687478 - 687465 - G 72 -8.1 -3.50447 | TCAACTGTTATAGAA GACGC AAAA GCGTC TAAAGAGTTTTCTAC TGRD_477 694308 - 691885 - | hypothetical protein TERM 735 691938 - 691951 + g 75 -5.3 -4.86621 | ATCTTATTTTATTAT TTACG GTAT CGTAA TTTTTCATTGAGACT TERM 736 692897 - 692907 + g 74 -4 -5.0925 | GATTTTTTTTGATGT TCTA ATT TAGA TTTTTCGTTTTCAAA TERM 737 693961 - 694014 + g 80 -9.1 -3.91434 | gap 1, opp_overlap 693966 693973 ATTTTCTTTTTCGGA GGCAAGCATATATGTTTCTGATGTAT TAG ATAAGTCAGAAACAAGTTTGC-TGCC TTTATAAAATAGTTT TGRD_478 694941 - 694483 - | hypothetical protein TGRD_479 697727 - 695190 - | DNA mismatch repair protein MutS TERM 738 696237 - 696247 + g 72 -4 -4.99435 | overlap 696240 696245 CGCGGATAATATTTT TTCT TCA AGAA TTTTTAATTCTTCAG TERM 739 696682 - 696700 + g 73 -7.4 -4.11346 | TTAGGATTTGCGCTG CCGGAAGA AAC TCTTGCGG TTATTCTTTCAATAT TERM 740 697027 - 697007 - G 70 -3.1 -5.02074 | opp_overlap 697011, overlap 697009 TTATTTCTGAAAAAA TACTGACGC TTT GCGGCTGCA TTTCTTTTATATAAG TGRD_480 698305 - 697736 - | putative lytic transglycosylase TGRD_481 699558 - 698302 - | hypothetical protein TERM 741 698459 - 698477 + g 82 -10.3 -3.5394 | opp_overlap 698458 698457 TCTTCGGCTAAAACC TGCTGGG TGCTT CCCAGCA TTTCCGAAACAATTT TGRD_482 700827 - 700171 - | A24A-like peptidase TERM 742 700840 - 700854 + r 73 -4.2 -4.84642 | opp_overlap 700840 CATTGTTATAATTTA CTCCGA AAA TCTGAG TTTTGTTACTTTAAC TGRD_483 703158 - 702508 - | hypothetical protein TERM 743 702653 - 702666 + g 77 -2.5 -5.53991 | overlap 702652 ATATCTGCATCTTGG TTATT GAAA AATAA TTTTTTTAATGACTC TERM 744 702704 - 702714 + g 86 -5.4 -5.33785 | ATTTTAAAATCAGCT GGAA GAT TTCC TTTTTTATAATCATT TERM 745 702716 - 702736 + g 77 -2.7 -5.4505 | GCTGGAAGATTTCCT TTTTTATAA TCA TTAAAAAAA TTTTTTATTAAAGGC TERM 746 702814 - 702826 + g 79 -4.9 -5.09204 | ACATTTTTTTTGATA TTCTA AAA TAGAA TTTTTATTGAGATGT TGRD_484 704498 - 703290 - | hypothetical protein TERM 747 703829 - 703819 - G 70 -2.6 -5.08824 | opp_overlap 703819 GGTTTATTTAAAAAA TTAT TTA ATAA TCTTAACATCCCCTT TGRD_485 704836 - 705225 + | hypothetical protein TGRD_486 707464 - 707153 - | hypothetical protein TERM 748 707673 - 707663 - R 72 -2.6 -5.27335 | GTTGGTAAATAAAAA TAAA GAA TTTA ATTAGAGTGAAGGGA TGRD_487 708221 - 707709 - | pantetheine-phosphate adenylyltransferase TGRD_488 710840 - 708702 - | OstA-like outer membrane protein TERM 749 710079 - 710096 + g 74 -2.7 -5.40464 | opp_overlap 710079 GGGTTCATTAACAGA GATGC TTCCGCTT GCATC TTTTTCTTTATAATC TERM 750 711817 - 711804 - R 77 -3.1 -5.40464 | overlap 711809 TATGACAAACAAAAA CAGAA TAAA TTCCG AGAATTAAAAATTAA TGRD_489 714088 - 713576 - | pantetheine-phosphate adenylyltransferase TGRD_490 716785 - 714569 - | OstA-like outer membrane protein TERM 751 715946 - 715963 + g 74 -2.7 -5.40464 | opp_overlap 715946 GGGTTCATTAACAGA GATGC TTCCGCTT GCATC TTTTTCTTTATAATC TGRD_491 718034 - 716769 - | folylpolyglutamate synthetase TGRD_492 718840 - 718016 - | acetyl-coenzyme A carboxylase carboxyl transferase beta subunit TGRD_493 720467 - 719910 - | N-(5'-phosphoribosyl) anthranilate isomerase TERM 752 720909 - 720932 + r 72 -8.4 -3.50302 | AACACCGCTTTACTT TGATTTTTTT CTCC AAAAAAATCA TCTATTTTATCCTGA TERM 753 721289 - 721321 + r 87 -2.2 -6.09196 | overlap 721290 GTCTGTAATATTTCT ATCATAATCTTT TTTTAATTC AAAGATTATGAA TTTTTTTGTTTTAGA TERM 754 722811 - 722830 + r 74 -9.4 -3.12378 | AAGAGTCTTTTATCA GAAAAAGC CAGC GCTTTTTC TTCACTCGTATCGTT TERM 755 723848 - 723824 - R 77 -10.1 -3.0806 | opp_overlap 723828, overlap 723828 CCCAAATTGGCAACA TTAATGCAGGC TCT GCCTCCATTAA CTAACACTCTATATG TGRD_494 725301 - 724912 - | phosphoribosyl-AMP cyclohydrolase TERM 756 725428 - 725410 - R 83 -6.8 -4.90079 | AGCGGAATAATAAAA GCAATCAA TTG TTAATTGC AAACTCTGCTCTGAT TGRD_495 726196 - 725414 - | imidazole glycerol phosphate synthase subunit TGRD_496 726924 - 726190 - | 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide isomerase TGRD_497 727557 - 726925 - | imidazole glycerol phosphate synthase subunit TGRD_498 728279 - 727692 - | imidazoleglycerol-phosphate dehydratase TERM 757 728010 - 727996 - G 76 -4.2 -5.11836 | ATAGGTAAAAGAAAA TGTCCG TAG CGCACA ATGCCTTTTTTATCG TGRD_499 729559 - 728300 - | histidinol dehydrogenase TERM 758 729626 - 729637 + r 81 -5.8 -4.88407 | opp_overlap 729614 729624 729625, overlap 729624 AACCGCGCATAAAGC GAGC ACTC GCTC TTTTATTAATTTATT TGRD_500 731474 - 729663 - | ComEC-like cytoplasmic membrane protein TERM 759 729880 - 729893 + g 91 -5.2 -5.7946 | opp_overlap 729874 729873, overlap 729874 TCATCAAATCCGACA GCCG TTATGT CGGC TTTTTTTATTCCCGA TERM 760 730307 - 730288 - G 77 -10.8 -2.52317 | overlap 730284 730287 GAAAGAATAAATGAG CACAATGC TGCA GCATTGTG AAATATAAAAGTTAA TERM 761 730454 - 730442 - G 78 -7.7 -4.27192 | opp_overlap 730441 AAACCGGTATCAAAA TCAGC TGG GCTGA AATTGTAACTGACAG TERM 762 731441 - 731429 - G 73 -3.3 -5.2204 | opp_overlap 731429 CATAAGTAATAAAAA CCGTT ATG ATCGG TCTTTTGCACAATGT TERM 763 731630 - 731605 - gH 78 -3.9 -5.35365 | opp_overlap 731605 731613 731615, overlap 731607 AAAAGATAATAAAAA TATCGTCGCAG GCAT CGGCGATGACA GTTTTTGCTTTAAGT TGRD_501 731516 - 732511 + | thiamine-monophosphate kinase TGRD_502 732462 - 732932 + | hypothetical protein TERM 764 733545 - 733533 - g 76 -4.9 -5.00895 | CGGACTATACAAAAA TAAAG CCG CTTTA TATCCGCCGCTCATG TGRD_503 732929 - 733585 + | M22 family peptidase TGRD_504 734542 - 734225 - | hypothetical protein TGRD_505 735194 - 734676 - | hypothetical protein TGRD_506 736755 - 736231 - | hypothetical protein TERM 765 739319 - 739342 + r 72 -6.2 -4.4078 | gap 1 TCTCCTTTTTATTTT TCTGTTTGCAT AAA ATG-AAACAGA TTTTCCTTCCCAAAC TGRD_507 740741 - 740379 - | hypothetical protein TERM 766 740528 - 740550 + g 74 -4.2 -4.90296 | TTTTAAAACTTCCCG TATGATGACT TAT AATCATCGTA TTTTTGTCAAGTTTT TGRD_508 742466 - 740760 - | MdlB-like ABC transporter ATPase component TERM 767 741938 - 741920 - G 76 -2.4 -5.49809 | overlap 741922 TAAATTGTAAAAAAA TCGGCA ACAAACA TGCCAA AAAGAATATTGAACT TERM 768 743008 - 743024 + r 86 -8.1 -4.69214 | ACTAACTCCTACTTT CTGTAAA ATT TTTACAG TTTCTTTATTCAATA TERM 769 743170 - 743226 + r 100 -10.4 -4.61873 | gap 1, opp_overlap 743172, overlap 743171 743172 743182 TTTTATCAACAAATA AACTCC-ACCTCATGATTAATGTTCCA TGCA TGGAACATTAATCATGTAGTAGGAGCA TTTTAATTTATAAAC TERM 770 743171 - 743225 + r 95 -13.9 -3.36401 | gap 1, opp_overlap 743172, overlap 743170 743172 743182 TTTATCAACAAATAA ACTCC-ACCTCATGATTAATGTTCCA TGCA TGGAACATTAATCATGTAGTAGGAGC ATTTTAATTTATAAA TERM 771 743224 - 743172 - R 100 -19.6 -4.70887 | gap 1, opp_overlap 743171 743170 743172 743182 TTATCAACAAATAAA CTCC-ACCTCATGATTAATGTTCCA TGCA TGGAACATTAATCATGTAGTAGGAG CATTTTAATTTATAA TERM 772 743172 - 743224 + r 100 -17.4 -2.61117 | gap 1, opp_overlap 743172, overlap 743171 743170 743182 TTATCAACAAATAAA CTCC-ACCTCATGATTAATGTTCCA TGCA TGGAACATTAATCATGTAGTAGGAG CATTTTAATTTATAA TERM 773 743182 - 743213 + r 100 -16.2 -2.78715 | opp_overlap 743172, overlap 743172 743171 743170 ATAAACTCCACCTCA TGATTAATGTTCCA TGCA TGGAACATTAATCA TGTAGTAGGAGCATT TGRD_509 744372 - 744037 - | aspartate 1-decarboxylase precursor TGRD_510 745398 - 744418 - | MscS-like mechanosensitive channel TERM 774 745395 - 745377 - G 73 -3.2 -5.10033 | TTAACACAAACAAAA TTATGCTT TTT AACCATAA CATAAAATTTGACGG TGRD_511 745772 - 745413 - | putative dnaK suppressor TERM 775 745690 - 745702 + g 88 -7.7 -4.87133 | TCATATATTCCTCTT TGAGC TTT GCTCA TTTTGTTTAAAAAAT TGRD_512 747265 - 745784 - | arginine decarboxylase TERM 776 746232 - 746244 + g 70 -3.3 -4.89393 | CTTTCAATCTCATAG CCGGA AAG TCCAG TTTTTGTAACGTTTA TERM 777 746586 - 746560 - G 76 -6.7 -4.4195 | overlap 746561 ACATAGCGGACAAAA TTTTATGCGTT GATTG AACGCATAAAT CAGCTCCCGCGCTAA TERM 778 746585 - 746561 - G 77 -10.2 -3.24447 | overlap 746560 CATAGCGGACAAAAT TTTATGCGTT GATTG AACGCATAAA TCAGCTCCCGCGCTA TGRD_513 747837 - 748283 + | ribosomal-protein-alanine N-acetyltransferase TERM 779 749539 - 749528 - g 71 -4.4 -4.81306 | opp_overlap 749528, overlap 749529 TTTAATAAAAAAGAA GCTT TTAA AAGC TGTTTTAACAGACTT TGRD_514 748901 - 749806 + | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase TERM 780 749818 - 749832 + F 71 -6.4 -4.09108 | opp_overlap 749818 GTAATGGTAGCACAA GGGATT TTG GATCCC TTTGTCTAGGTTCGA TERM 781 749943 - 749927 - f 79 -3.7 -5.41941 | TAAAGTAAACAAAAA CGTAG TATTTCC CTACG CGAGTTCTAAAAATA TGRD_515 750774 - 751418 + | adenine/cytosine-specific DNA methylase TERM 782 752249 - 752259 + T 73 -4 -5.10933 | opp_overlap 752248 752249 ATAACCGCAATTAAT TTTG AGT CAAA TTTTATTTTGACTAA TERM 783 752435 - 752445 + T 72 -2.6 -5.24129 | AATGAAACTGATAGT TTAT TTA ATAA TTTTTTATCAGAAAC TGRD_516 754664 - 753000 - | DNA repair protein RecN TERM 784 753897 - 753909 + g 84 -4.9 -5.30199 | CGCACCATAAGAGTT TATTG CTT CAATA TTTTTCTTCGTTTTT TERM 785 753987 - 754005 + g 78 -3.8 -5.37593 | opp_overlap 753964 753988, overlap 753988 AATTTCTTGCGACAA AGCAGAGA TTT TTTCTGCA TTTTTTAATTTCGGA TERM 786 754147 - 754158 + g 81 -3 -5.63517 | TTTAAAGCTTCAAGT TTTG ATCT CAAA TTTTTTATTTGCGCA TGRD_517 755485 - 754664 - | poly(p)/ATP-NAD kinase TERM 787 754939 - 754927 - G 76 -3.3 -5.31855 | GAGTAAGAATAAAAA CCGGA AGA TTCGG GTAAACTATAGGTCC TERM 788 755422 - 755445 + g 70 -9 -2.95836 | opp_overlap 755426, overlap 755421 755426 GCCATAATGCAATTT CAAATGCAAG TTTT TTTGCATTTG CTTTCGATTTATTGT TERM 789 756197 - 756218 + r 72 -5.8 -4.36914 | overlap 756199 TTTTGAGATGCAATG GCGTGCAG CATTTT CTGCACAC TTTTGTAGAAAAGAA TGRD_518 758372 - 757023 - | putative RNA methyltransferase TGRD_519 758932 - 758435 - | hypothetical protein TGRD_520 760459 - 759257 - | cysteine desulfurase TERM 790 759575 - 759565 - G 70 -6.8 -4.13711 | TTAAAATATTAGAAA CAGC TCT GCTG CCACTGCCGTTAATA TERM 791 759675 - 759694 + g 73 -7.2 -4.11216 | TATTCCTCAATTTTA GCATTTGA AATC TCAAGTGC TTTTGCAAGTCCAGA TERM 792 759919 - 759932 + g 93 -3.9 -6.04324 | GTACGGCATCAGTAT GAAAA TAAA TTTTC TTTTTTCTTTTTTCG TGRD_521 761438 - 761016 - | putative Holliday junction resolvase RuvX TGRD_522 763528 - 761525 - | NAD-dependent Fe-hydrogenase catalytic component TGRD_523 765471 - 763600 - | NAD-dependent Fe-hydrogenase 51kDa NADH dehydrogenase component TERM 793 763742 - 763757 + g 76 -7.6 -4.06533 | GCGCAAACCGTACAG CCGATA CATT TATCGG TTATTTCATAATTTA TGRD_524 765959 - 765486 - | NAD-dependent Fe-hydrogenase 24kDa NADH dehydrogenase component TERM 794 765630 - 765618 - G 73 -2 -5.27779 | TTCAATAGTAAAAAA TACA TCTTT TGTA GAATATTCAGCTTCT TGRD_525 767339 - 766161 - | NapA type Na+/H+ antiporter TGRD_526 768118 - 767447 - | thymidylate synthase ThyX TGRD_527 769417 - 768128 - | adenylosuccinate synthetase TERM 795 768763 - 768779 + g 76 -2.3 -5.47159 | overlap 768759 TACCCTGAGCACTTT CAAAAAG TAT CTTTTTA TTTTTCTTTATTGCA TERM 796 768835 - 768871 + g 76 -10.4 -2.6587 | opp_overlap 768839, overlap 768835 768839 TAACAAAGGGTTCAA GGAATATTGAAAGCTC TTCAC GATCTTTCAATATTTC CTCTTTCAAGTTTGC TERM 797 768839 - 768867 + g 76 -7.6 -4.00934 | opp_overlap 768839, overlap 768835 768835 AAAGGGTTCAAGGAA TATTGAAAGCTC TTCAC GATCTTTCAATA TTTCCTCTTTCAAGT TERM 798 769533 - 769549 + r 73 -9.5 -2.78596 | overlap 769535 TTTGAACTCGTGTCG CAGGATT GAA AATCCTG TGTCCTAGACCCCTA TGRD_528 770228 - 769767 - | riboflavin synthase beta subunit TGRD_529 771623 - 770412 - | riboflavin biosynthesis protein RibAB TERM 799 770664 - 770675 + g 71 -4.4 -4.8048 | TTTATTGGCTTCTAC GGTA TCCA TACC TTTTTCCTGTAAACG TERM 800 771676 - 771697 + r 82 -5.3 -5.36181 | opp_overlap 771681, overlap 771668 AAACCCGTTTTCCTT TAATATTTC AAGG GAAATATTG TTTGTTTTTTTATTT TGRD_530 772272 - 771655 - | riboflavin synthase alpha subunit TGRD_531 773465 - 772398 - | riboflavin biosynthesis protein RibD TERM 801 773596 - 773580 - H 76 -3.7 -5.35354 | opp_overlap 773590, overlap 773590 GACATAACGAAAAAA TGACAAA ATT TTCGCCA ACATGGGAATTTTGT TERM 802 775265 - 775247 - H 100 -9.6 -5.06816 | AGGTTTTAAGAAAAA TTATCCGC ATA GCGGACAA AACACAAAAAGGAGA TGRD_532 775286 - 775612 + | hypothetical protein TERM 803 775686 - 775657 - T 100 -18.1 -4.14511 | opp_overlap 775654 775651 775651 AATTGTATGTTAAAA TCTGTGTGCGTAT TTAA ATACGCACACAGA AAGTCGATTAGTTTA TGRD_533 777023 - 775764 - | obg subfamily GTP-binding protein TERM 804 776747 - 776758 + g 81 -4.4 -5.30348 | TTTTAAAAATCAGAG TTCC CAAA GGAA TTTTTATTATTAAGT TGRD_534 777298 - 777047 - | 50S ribosomal protein L27 TGRD_535 777642 - 777328 - | 50S ribosomal protein L21 TERM 805 777704 - 777720 + H 73 -3.6 -5.03314 | opp_overlap 777704 ATTTGTCAAATTAAA GCACGG GCGAA CAGTGC TTTTTTCGCAATAGC TGRD_536 777746 - 778933 + | aspartate aminotransferase TGRD_537 780272 - 779028 - | histidyl-tRNA synthetase TGRD_538 780948 - 780289 - | hypothetical protein TERM 806 780854 - 780841 - G 73 -5.3 -4.57353 | TTTCATTATAGAAAA CGTTA GCCA TAACG GAATGACAACGACTA TERM 807 781204 - 781194 - H 79 -4 -5.40464 | GACGACAAACAAAAA TCAA GTC TTGA AGTTAAAGTTTCGCC TERM 808 783014 - 782996 - g 72 -8.2 -3.62522 | overlap 783004 TAATCCTTTTAACAA TGCAAAAG CTT CTCTTGCA AGAAGAAATCTCGTT TERM 809 783342 - 783327 - g 88 -7.6 -4.788 | AAATCAAGGCAAAAA CCTGTA AAAG TACAGG GCGCGCTAATAGCTA TERM 810 783695 - 783681 - g 74 -2.8 -5.33785 | AACTACGACAAAAAA TACAGA GGT CCCGTA ATTTTAAAAACGGCA TGRD_539 782337 - 784406 + | penicillin-binding protein 1B TGRD_540 785932 - 784466 - | ribonuclease G TERM 811 785936 - 785948 + r 76 -2.7 -5.42605 | ATTTTTAAGCATATA TAATC TTA GATTG TTTTATTTTTATTCC TERM 812 786524 - 786514 - R 70 -4 -5.0133 | TAGTCTTTTAAAAAA TTGT ACT ACAA ACAACAGATCGGAAG TGRD_541 787066 - 786797 - | hypothetical protein TERM 813 787616 - 787606 - R 74 -5.4 -4.73828 | opp_overlap 787604 787606 ACAATTAAAAAATAA CAAG ACG CTTG TATTTTAAAACAGAA TGRD_542 789210 - 787726 - | glutamyl-tRNA synthetase TGRD_543 790146 - 789307 - | prephenate dehydrogenase TGRD_544 791168 - 790146 - | 3-deoxy-7-phosphoheptulonate synthase TGRD_545 792343 - 791210 - | histidinol-phosphate aminotransferase TERM 814 791746 - 791724 - G 72 -7.8 -3.65827 | opp_overlap 791727, overlap 791727 791739 791741 TAATCTTCATCTAAA GACGCATATT CAA AATATGCTTC GTCAAGCACAACAAT TGRD_546 793633 - 792554 - | chorismate mutase/prephenate dehydratase TGRD_547 795769 - 795059 - | hypothetical protein TERM 815 796058 - 796041 - R 89 -6.3 -5.69793 | opp_overlap 796041 ATAGCAAATAAAAAA CCCTTGA TTTC TCAAGAG TTCGTCATAATTTCC TGRD_548 798155 - 796263 - | NAD+ synthetase TERM 816 798045 - 798060 + g 70 -9 -2.94595 | TAAAAGTTCGACGCC GCAAGC ATTC GCTTGC TCTATCAACTTTATT TGRD_549 800256 - 798271 - | primosomal protein N' TERM 817 799296 - 799308 + g 76 -6.3 -4.65666 | TTAACGTTAAAACTT TTACC TCA GGTAA TTCTTTTTTACATAT TGRD_550 801014 - 800253 - | uracil-DNA glycosylase TERM 818 800356 - 800372 + gr 72 -5.9 -4.34444 | opp_overlap 800356 GCAGGATGAAATGTA GGTATAA GTT TTATGCC TTTATATTCTCTTAC TERM 819 800449 - 800471 + gr 85 -10 -3.8901 | TTTGTGGAAGACGCT CCTAAAGTCA CAA TGATTTTAGG TTTAATAATTTCAAG TGRD_551 801615 - 800962 - | phosphopantothenate-cysteine ligase TGRD_552 802151 - 801615 - | phosphopantothenoylcysteine decarboxylase TGRD_553 803119 - 802439 - | guanylate kinase TERM 820 802796 - 802784 - G 71 -4.9 -4.57073 | CATCTTGCCTAAAAA TACTT TCG AAGTA CCGTAATAATTGCCG TGRD_554 803928 - 803314 - | NTP pyrophosphatase TERM 821 803474 - 803454 - G 77 -2.5 -5.47159 | opp_overlap 803472, overlap 803426 803456 803471 CCGGAACATAAAAAA CCGGATC ATACCCA AACCCGG CAGTCCCTGCAGTAT TGRD_555 806814 - 804163 - | valyl-tRNA synthetase TERM 822 804310 - 804326 + g 73 -5.9 -4.42062 | overlap 804306 TGTTCTGCCAACCTC TTGCTTT GCA AGAGCAA TTTCTTTCGCAAGTC TERM 823 805535 - 805550 + g 73 -3.2 -5.1971 | TCAAGCGAAGCAACT GGACTA CAGT TCGTCC TTTTTCCTTTTTCGT TERM 824 806523 - 806538 + g 76 -6.2 -4.57341 | CATATTTTGTTCTGC CTTCTT TTTT AAGAAG TTTTTCAACAACATT TGRD_556 806969 - 807670 + | 3-oxoacyl-[acyl-carrier-protein] reductase TERM 825 808833 - 808843 + G 81 -4.6 -5.40474 | opp_overlap 808833 TGGATTCGGAGGACA GGGC GCC GCTC TTTTTTTCAAAAAAT TGRD_557 807766 - 808863 + | 3-oxoacyl-[acyl-carrier-protein] synthase II TERM 826 809594 - 809579 - g 81 -4 -5.58209 | gap 1, opp_overlap 809587, overlap 809580 GGAAATTGAAAAAAA GCC-GAA AGT TTCTGGC GGAAATTTATTTTTA TERM 827 810772 - 810758 - g 71 -7.2 -3.91506 | TCAGTGGGAAAAAGA GAAATC TTC GATTTC AGAAATCAGACGACT TERM 828 810859 - 810835 - g 74 -8.5 -3.74749 | overlap 810828 810839 AGCAGAAAGCCGAAA GAAACGGCGAT TTA AACGCCGTTGC AGAAATTCGTTATGG TERM 829 810855 - 810839 - g 82 -7.9 -4.4784 | overlap 810828 810835 GAAAGCCGAAAGAAA CGGCGAT TTA AACGCCG TTGCAGAAATTCGTT TERM 830 811726 - 811714 - g 82 -10.5 -3.56594 | TTAAATCCTTTGAAA GCCGC TTT GCGGC AAAAAATATTCATGT TGRD_558 809349 - 811958 + | chaperone ClpB TERM 831 812264 - 812247 - g 73 -5.5 -4.60924 | opp_overlap 812248, overlap 812248 GAAACTCTTGAAAAA TCCGGTA TAAA TACCGGT GTTTTTAAGCCAGTT TERM 832 812248 - 812263 + G 80 -9 -3.90316 | opp_overlap 812247 812248 AAACTCTTGAAAAAT CCGGTA TAAA TACCGG TGTTTTTAAGCCAGT TERM 833 812263 - 812248 - g 73 -9 -3.35832 | opp_overlap 812248, overlap 812247 AAACTCTTGAAAAAT CCGGTA TAAA TACCGG TGTTTTTAAGCCAGT TGRD_559 812160 - 812810 + | dethiobiotin synthetase TERM 834 813396 - 813382 - g 81 -4.3 -5.36441 | CGTTTACAGAAAAAA GGAAA TAAAG TTTCC CGTAACTGCAGAAAA TERM 835 813457 - 813433 - g 84 -11.5 -3.16604 | overlap 813431 813435 AGATCACAATATACA GATGCACTGTC GGG GACAGTGCATA AAAGAGGTTGAGTCA TERM 836 813455 - 813435 - g 100 -14.1 -3.13593 | overlap 813433 813431 ATCACAATATACAGA TGCACTGTC GGG GACAGTGCA TAAAAGAGGTTGAGT TGRD_560 812795 - 814198 + | adenosylmethionine-8-amino-7-oxononanoate aminotransferase TGRD_561 815344 - 814184 - | 8-amino-7-oxononanoate synthase TERM 837 814302 - 814315 + g 75 -5.3 -4.83615 | GGCGGCTTTATCGCC GGAAT ATAA ATTCC TTTTTCTCGAAGATA TERM 838 814682 - 814666 - G 75 -8.7 -3.53444 | opp_overlap 814665 814662, overlap 814667 CTATTTTGTTTGAAA CGCCGAA AAC TTCGGCA AGTCCTTTTCCTTCT TERM 839 814681 - 814667 - G 74 -10 -2.71924 | opp_overlap 814665 814662, overlap 814666 TATTTTGTTTGAAAC GCCGAA AAC TTCGGC AAGTCCTTTTCCTTC TERM 840 814847 - 814860 + g 72 -3.8 -5.00884 | overlap 814849 AATTTCATATTTATG CGCT CGCTTA AGCG TTTTTTCAAGCGAGT TERM 841 815505 - 815495 - R 80 -6.8 -4.72333 | overlap 815499 AAGCAGAGTTAAAAA CCGA GCC TCGG TCAGGCATTACAATA TERM 842 815888 - 815898 + r 89 -3.2 -5.77853 | CAAAAAATGTCTTTA CTGT AAT ACGG TTTTTTTTAGGACTT TGRD_562 817426 - 816185 - | argininosuccinate synthase TGRD_563 818604 - 817408 - | acetylornithine transaminase TGRD_564 821376 - 820627 - | acetylglutamate kinase TERM 843 820765 - 820777 + g 70 -3.4 -4.93079 | overlap 820771 GGTTATGGTTTTATC CTCT ATTAA AGAG TTTATTTCTTTTATT TERM 844 821085 - 821098 + g 79 -5.2 -5.24531 | TACCGGATATTCCGA CGGC ATTTGC GCCG TTTTTTATAAGACCT TGRD_565 822183 - 821437 - | hypothetical protein TERM 845 821660 - 821646 - G 100 -8.6 -5.16969 | CAGATAAAAAATAAA CCGATA TTT TATCGG GATCAAAACCAAAAA TGRD_566 822769 - 822167 - | putative N6-adenine-specific methylase TGRD_567 823190 - 822774 - | hypothetical protein TGRD_568 824393 - 824662 + | DNA-binding protein HU-1 TERM 846 825078 - 825068 - f 70 -4 -4.93595 | ATAAAAATTGAAAAA TATC AAG GATA AGACATGGAAAAAAA TERM 847 825646 - 825626 - g 76 -6.1 -4.61527 | overlap 825627 825628 AAAAGCGCCCAAAAA GCCGGCT ATGCCGA AGCCGAC CCATCTTTTGATGTC TGRD_569 825083 - 826366 + | homoserine dehydrogenase TERM 848 827432 - 827444 + T 77 -9.1 -3.33214 | opp_overlap 827431, overlap 827430 CGACAATCAACGCAC GGAGC TTC GCTCC TCTTATGCTTCGCAT TERM 849 829080 - 829094 + T 80 -7.2 -4.46155 | opp_overlap 829082 ATTCACGGCACAACC CAGTTT ATC AAACTG TTTTCTAACTGTCTC TGRD_570 831080 - 829395 - | pyrophosphate-fructose-6-phosphate 1-phosphotransferase TERM 850 832470 - 832459 - R 73 -7.2 -4.0371 | CACTGCTGATATAAA CCGG TTCG CCGG AAATCTGCACCATTT TERM 851 833556 - 833568 + r 71 -6.3 -4.19953 | opp_overlap 833556 TCTTCTCCGATTAAA GAGAA ATA TTCTC TTTTGGAATTCAATA TGRD_571 834869 - 834297 - | hypothetical protein TGRD_572 835801 - 834869 - | protein translocase subunit SecF TERM 852 835135 - 835150 + g 73 -6.2 -4.49716 | opp_overlap 835134 835135 TTACCGCTACAAAAT CTTCTT TTAC AAGAAG TTTTAAATTTTCTTT TGRD_573 837241 - 835814 - | protein translocase subunit SecD TERM 853 836330 - 836340 + g 73 -6.8 -4.33203 | opp_overlap 836330, overlap 836328 ATCATCTCCAAGTGA CGGT CCG ACCG TTCTTTCTTCTATTA TGRD_574 837937 - 837242 - | hypothetical protein TGRD_575 838370 - 837981 - | protein translocase subunit YajC TERM 854 839672 - 839682 + r 71 -5.4 -4.56775 | opp_overlap 839672 ATAAGTAAGGTACAA CTGT TTA ACAG TTTTTGAGGCGGAAT TERM 855 840562 - 840574 + r 77 -9.1 -3.33214 | overlap 840560 AACAACGACAGGCAC GGAGC TTC GCTCC TCTTATGCTTCGCAT TGRD_576 841269 - 840685 - | hypothetical protein TGRD_577 842089 - 841421 - | hypothetical protein TERM 856 841453 - 841468 + g 70 -3.4 -4.89393 | AATTATTTTTACGCA TTAAAT CCTC ATTTAA TTTTTGTACAATTTC TGRD_578 842693 - 842166 - | hypothetical protein TGRD_579 843504 - 842839 - | hypothetical protein TERM 857 843403 - 843386 - G 74 -7.7 -3.86346 | opp_overlap 843386 843384 TCAGCGGCGTACAAA GCATGAC CTCT GCCATGC TCTTTATATCCCATA TERM 858 845011 - 844999 - H 89 -7.7 -5.25803 | opp_overlap 844999 845010 AAGCTTTAGAAAAAA TAGGC GCT GCCTA TCCTATGATATTGTA TERM 859 846596 - 846608 + H 77 -9.1 -3.28497 | overlap 846591 AGCTGGAATTTTGAG TGCGG TAT CCGCA TTGGGTTTGGGGTCG TERM 860 847543 - 847553 + H 76 -6.8 -4.46775 | TGACGGCAACCGGAC TGCG TTA CGCA TTTATGTTTTCCCTC TERM 861 848202 - 848179 - H 78 -2.4 -5.63517 | GTCGCAAATAAAAAA GGAATCCATG TCGT CATAAATGCC GTCGTAATAAAAGGC TERM 862 848593 - 848583 - H 70 -4 -4.89521 | overlap 848578 ACATTTTAAACAAAA TTGT TTG ACAA AATAACTACATTAAG TGRD_580 848654 - 849577 + | quinolinate synthetase TERM 863 851705 - 851695 - g 70 -2.6 -5.12707 | opp_overlap 851695 GGAAAGTCTAAAAAA TTTT ATA AAAA TCGTATGCGAAAATT TERM 864 851765 - 851775 + G 74 -8.2 -3.65812 | ACTTTCAGCGTATGC CCGC AGT GCGG TTATATTGAAGGCGA TGRD_581 849833 - 851959 + | putative ribonucleoside-triphosphate reductase TGRD_582 851981 - 852160 + | putative ribonucleoside-triphosphate reductase TERM 865 852401 - 852389 - g 84 -7.7 -4.57837 | opp_overlap 852399 ATACTTTTTGAAAAA GAGAC AGG GTCTC TTAAAAGGAGTGGTT TGRD_583 852210 - 852803 + | hypothetical protein TGRD_584 855343 - 852938 - | homocysteine S-methyltransferase TERM 866 853311 - 853321 + g 82 -6.8 -5.03314 | opp_overlap 853311, overlap 853308 ATTTTGCCGGCAGAA GACG CTT CGTC TTTTTTCAGCGTAGC TERM 867 853621 - 853608 - G 70 -6.7 -4.07687 | opp_overlap 853607 ATCTGCTTTCTAAAA GAGGT AAAA ACCTC CATGTATTTAACCGC TERM 868 854856 - 854872 + g 73 -6.5 -4.33487 | TCAAAATTTTCTTTT GCCGCAA GAA TTGCCGC TTTAGTTTCTTTTAT TERM 869 855310 - 855328 + g 100 -7.6 -5.48514 | TTATTAATATGCGGC TTTTTAGA ATA TCTAAAAA TTTTTGTTTATTCAT TGRD_585 856340 - 855711 - | putative cobalamin-dependent methionine synthase TGRD_586 856693 - 857091 + | putative thioesterase TERM 870 857517 - 857505 - g 73 -9.1 -3.35342 | opp_overlap 857502 AAGAAAAACACTTAA GCGCA GAA TGCGC AAATATTATAAAAGA TGRD_587 857117 - 857566 + | tRNA-specific adenosine deaminase TERM 871 857836 - 857850 + T 75 -8.5 -3.41708 | AATTTTGAAATTATG GCCGC TTAAT GCGGC TTCCGTTTTACTTCA TGRD_588 862056 - 859960 - | Fe2+-transporter membrane unit TERM 872 861170 - 861159 - G 78 -5.8 -4.82667 | TCACTACAGCAAAAA TGGG AATC CCCA TGTACCTGTTGAGCG TGRD_589 862398 - 862060 - | Fe2+-transporter substrate-binding unit TERM 873 862097 - 862109 + g 78 -6.3 -4.80396 | TTATCGGCAATTTTA TTGCT TAA AGCAA TTTTTGAATCTTTTA TERM 874 862917 - 862946 + r 100 -15.1 -3.83262 | opp_overlap 862921, overlap 862913 CAAGATAGTTCTCAA GCGAGGCGCTTAA ATTG TTAAGAGCCTCGC TTCTTCTAACCTTTA TERM 875 863522 - 863544 + r 83 -6.4 -4.93365 | opp_overlap 863543, overlap 863524 863525 863541 863543 ACATATCTATACGCA CCTCTATAAA CGT TTTATAGACG TTTTTAGTTATAAAA TGRD_590 864883 - 863747 - | hypothetical protein TERM 876 864600 - 864614 + g 73 -5.8 -4.44667 | ATCTGCGTCGTTTCC CATAAA TTT TTTATG TTTCTTATTGCGCCG TERM 877 864648 - 864664 + g 73 -6.5 -4.2018 | overlap 864647 GGACTGTCGCCGACC GCGGG CACAGCT CCCGC TTCTTTTACAAGTTT TGRD_591 868550 - 865083 - | chromosome segregation protein SMC TERM 878 866454 - 866464 + g 84 -3.2 -5.69262 | CCGGGAATGTTTTTC CTCG ATC TGAG TTTTTATTTTTATCG TERM 879 866570 - 866586 + g 76 -5.1 -4.90296 | overlap 866572 866579 866581 CGGAAGAAATACTCC GCCTGAT TTC ATCAGAC TTTTTCTGAAGTTTT TERM 880 866579 - 866597 + g 84 -3.1 -5.74122 | overlap 866572 866570 866581 TACTCCGCCTGATTT CATCAGA CTTTT TCTGAAG TTTTTTTATCTGCTC TERM 881 867445 - 867461 + g 78 -3.7 -5.27335 | AGTCCAACTTTTATC GAATTGT ACT GCAGTTC TTTTTCTTTGAAAAC TGRD_592 869918 - 868737 - | hypothetical protein TERM 882 869772 - 869753 - G 76 -2.1 -5.53288 | opp_overlap 869757 CGTAAGCTAAAAAAA GCTGC TTTTTTGCGT GCAGC CAGAAAGGATTTTTA TGRD_593 871137 - 870160 - | nucleoside-diphosphate-sugar epimerase TERM 883 870391 - 870377 - G 75 -5.7 -4.81359 | AATTTAAAGACAAAA TCTGC AACAG GCAGA GGAATTGTCTTTACA TERM 884 870725 - 870742 + g 71 -4.2 -4.88067 | overlap 870728 AGCTTGCTTAACCCG TAATCC GAAACG GGATTA TTTTTATCCGTAACT TERM 885 871208 - 871226 + H 78 -2.4 -5.63236 | opp_overlap 871198, overlap 871198 871210 AATCAGCAATAAGTT TTTGCTCT TTC AAAGCAGA TTTTTATTTTTCAGT TGRD_594 872593 - 872910 + | hypothetical protein TGRD_595 875678 - 873033 - | aldehyde-alcohol dehydrogenase TERM 886 873075 - 873065 - G 70 -2.6 -5.08088 | AAGCCTTAATAAAAA TATT TTT AATA TCAGCAATCAATGGA TGRD_596 877039 - 875810 - | electron transfer flavoprotein alpha subunit TGRD_597 878088 - 877300 - | electron transfer flavoprotein beta subunit TERM 887 877374 - 877384 + g 70 -6.8 -4.0641 | overlap 877359 CGCCGCTGAATTTCT CAGC ATC GCTG TTTCTCTGAGTCGGC TGRD_598 879469 - 878300 - | FAD-dependent acyl-CoA dehydrogenase TERM 888 879111 - 879139 + g 88 -3.1 -5.92399 | overlap 879113 CCGAAAGCCGCAAGT TTTTTGCCCGATG CAA TGTCAGGCAAATA TTTTTTCTTTTGTTC TERM 889 879113 - 879137 + g 73 -5.7 -4.55111 | overlap 879111 GAAAGCCGCAAGTTT TTTGCCCGATG CAA TGTCAGGCAAA TATTTTTTCTTTTGT TGRD_599 880240 - 879509 - | ribonuclease III TGRD_600 881471 - 880230 - | 3-oxoacyl-[acyl-carrier-protein] synthase II TGRD_601 881720 - 881481 - | acyl carrier protein AcpP TGRD_602 882614 - 881871 - | 3-oxoacyl-[acyl-carrier-protein] reductase TGRD_603 883540 - 882611 - | S-malonyltransferase TERM 890 883162 - 883177 + g 73 -5.4 -4.67011 | overlap 883148 CCGCCATTATTCCGG GCGTTT TTGC AGACGC TTTTTGAATAAACTT TGRD_604 884641 - 883655 - | 3-oxoacyl-[acyl-carrier-protein] synthase III TERM 891 884298 - 884286 - G 76 -6.2 -4.61199 | ATTCCATAGATAAAA CCGC TACAT GCGG CAGACAAATCAAACG TGRD_605 885658 - 884642 - | fatty acid/phospholipid synthesis protein PlsX TERM 892 885336 - 885316 - G 86 -4.6 -5.63517 | overlap 885318 TTTTTAAATAAAAAA GTGCCGCA GACAT TGCAGCGC CGGAATTGCCCATAG TGRD_606 885876 - 885658 - | 50S ribosomal protein L32 TGRD_607 888532 - 886430 - | ATP-dependent DNA helicase TERM 893 888383 - 888395 + g 74 -2.7 -5.39721 | CTTATAGGCATCTCT TATTG AAA CGATA TTTTTTCTGTCCTGA TERM 894 888445 - 888429 - G 86 -6.5 -5.18561 | CAAACAGGGAAAAAA GTCAGCA TAT CGCCGAC GGTTATTATACCGAG TGRD_608 888667 - 888858 + | 50S ribosomal protein L28 TERM 895 889679 - 889696 + T 91 -2.7 -5.95946 | gap 1, overlap 889680 ATTACAAGTATTTTT TTTGACCG TTT CGG-CAAG TTTTTTTATTCTTCC TERM 896 890847 - 890863 + T 73 -7.3 -4.07885 | opp_overlap 890845 890860 ACAAGGCAATGTATA CCGTTTT GCA AAAGCGG TTTTGCCACCAAATA TGRD_609 893253 - 892774 - | 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase TERM 897 893181 - 893161 - G 73 -6.9 -4.02424 | opp_overlap 893160 893161 ATCAATCAGCAGAAA TGGATACCT ATG AGGTATACA CTTTAAAATTTCCTC TGRD_610 897513 - 895240 - | outer membrane protein assembly factor YaeT TERM 898 896720 - 896735 + g 71 -4.8 -4.62984 | ATAGAATTACCGTCA TAAGTT ATGG AACTTA TTTTGTATCTGCTGC TERM 899 898611 - 898629 + G 81 -4.4 -5.34365 | overlap 898613 TGACTGAGCAGTTCG GCGACGAG AAA CCCGTCCC TTTTTCTTATTCTAC TGRD_611 897956 - 899749 + | glucose-inhibited cell division protein GidA TERM 900 900093 - 900066 - f 76 -6.5 -4.60487 | opp_overlap 900070, overlap 900070 TAGTACGGTCAAAAA TAAATGCAAAA AAGCGA CTTTGCATTTA ACATTTAAGAACATA TGRD_612 900262 - 900546 + | hypothetical protein TGRD_613 900811 - 901641 + | glucose-inhibited cell division protein GidB TGRD_614 902587 - 901697 - | pseudouridylate synthase TGRD_615 903327 - 902572 - | prolipoprotein diacylglyceryl transferase TERM 901 902631 - 902619 - G 93 -6.3 -5.95539 | overlap 902625 902626 902628 CTGTAAACAAAAAAA CAGAT ATT ATCTG CGATACAGAAAAATC TERM 902 902988 - 902972 - G 78 -3.7 -5.40072 | overlap 902974 GCCGGGGCAAAAAAA TCGCCTA ATT TAAGCAA ATGTATTTTTTTCCT TERM 903 903275 - 903246 - G 71 -4.2 -4.74917 | overlap 903248 ACGAAAGATAGAAAA TCGCCGTGGCAA AAGCTG TAGCCACGGAAA AACCGTAAGTATGTA TGRD_616 903796 - 903329 - | signal peptidase II TERM 904 903606 - 903596 - G 84 -3.2 -5.63236 | AGTTAAAAACAAAAA CACT ATA AGCG CAAAGAATGAATTCC TGRD_617 906582 - 903793 - | isoleucyl-tRNA synthetase TERM 905 904403 - 904413 + g 77 -8.2 -3.88291 | CAGAAATTACCTATT GCCG CTG CGGC TTTATGAAACTCATA TERM 906 906268 - 906258 - G 70 -6.8 -4.08216 | TCATTTCTTTTAAAA CGAG CTG CTCG ATAGGAAGACCATGG TERM 907 906542 - 906568 + g 93 -3.8 -5.97575 | TGAAAATCCGTTTTA GGAAGATTCA CCGTTTT TGAATATTCC TTTTTTTTATCCATT TGRD_618 906910 - 906647 - | hypothetical protein TGRD_619 907931 - 907236 - | hypothetical protein TERM 908 909433 - 909446 + r 76 -3.7 -5.24129 | overlap 909434 TCTTTACTTTTTCAG CCGGG AAAT CCCGA TTTTTTCTAAACGAC TERM 909 909434 - 909445 + r 70 -7.2 -3.73995 | overlap 909433 CTTTACTTTTTCAGC CGGG AAAT CCCG ATTTTTTCTAAACGA TERM 910 909600 - 909590 - R 70 -4 -4.87803 | TATCTTCAAATAAAA GATA TCT TATC ATATTCGCCTGTATT TGRD_620 912738 - 911443 - | adenosylhomocysteinase TGRD_621 913906 - 912725 - | S-adenosylmethionine synthetase TERM 911 914441 - 914424 - R 84 -5.7 -5.48054 | opp_overlap 914424 ACTAAAATCAAAAAA TTTATTC TCGG GAATAAA TTTAAACATTTCAGA TGRD_622 916668 - 915604 - | recombinase A TGRD_623 918931 - 917483 - | hypothetical protein TERM 912 917619 - 917643 + g 72 -9.2 -2.62171 | opp_overlap 917619, overlap 917618 917616 917621 GCCATAAAAGCAAAA GAGGCAGCGG CATTT CCGCCGTCTC CTATTTCCAAATCTG TERM 913 917643 - 917619 - G 100 -9.2 -4.73108 | opp_overlap 917619 917618 917616 917621 GCCATAAAAGCAAAA GAGGCAGCGG CATTT CCGCCGTCTC CTATTTCCAAATCTG TGRD_624 919632 - 919111 - | hypothetical protein TGRD_625 919921 - 919619 - | hypothetical protein TERM 914 920041 - 920055 + r 76 -4.2 -5.1861 | ATCGACGTCTGAACC CTTGGG TAG CGCAAG TTTTTTGGTCATGGA TGRD_626 922000 - 921125 - | putative metal-dependent phosphoesterase TGRD_627 923927 - 922623 - | phosphopyruvate hydratase TERM 915 922983 - 923000 + g 76 -4.9 -4.9725 | opp_overlap 922983 ATCATCGCCGACAAG CTGAAGT CTTG ATTTCAG TTTTTCTGTCAAAAT TGRD_628 924359 - 923949 - | hypothetical protein TGRD_629 924692 - 925387 + | putative 8-oxoguanine DNA glycosylase and DNA lyase TGRD_630 927749 - 927453 - | hypothetical protein TERM 916 928469 - 928507 + r 78 -10.4 -2.72263 | opp_overlap 928468 928469, overlap 928468 928483 AACAGTCTAATTAAG CTTGACAAGCTAGAGCAG GTC TTGGACTAGCTTGTTAAG ATTTCCGCAACCTGT TGRD_631 929813 - 928863 - | biotin operon repressor/biotin-[acetyl-CoA-carboxylase] ligase TERM 917 929318 - 929330 + g 84 -3.3 -5.75945 | GCCATTTTATTTCAG AACGG ATT CCGTA TTTTTTTTCAAGAAT TGRD_632 930658 - 929810 - | nicotinate-nucleotide pyrophosphorylase TGRD_633 932186 - 931086 - | cell division protein FtsZ TERM 918 931188 - 931176 - G 95 -7.7 -5.40474 | opp_overlap 931176 931174 931172 ATGCTGCGAAAAAAA GTCAC ACT GTGAC TCTCTATTTTTTATT TERM 919 932075 - 932044 - G 75 -9.6 -3.18023 | gap 1, opp_overlap 932042, overlap 932042 GCATCAGTATTAATA GCTACAAAT-TCGAC ATT GCCGACATTTGCAGC AATCATTCTATTAAT TGRD_634 933432 - 932188 - | cell division protein FtsA TERM 920 933052 - 933064 + g 73 -3.4 -5.1502 | AACTGTTTGAAGTAT TTCC TGATC GGAA TTTATTTTTATTTGT TGRD_635 934407 - 933610 - | putative cell division protein FtsQ TGRD_636 935329 - 934409 - | D-alanine-D-alanine ligase TGRD_637 936198 - 935326 - | UDP-N-acetylmuramate dehydrogenase TERM 921 935584 - 935595 + g 71 -4.4 -4.81752 | TATATTGAGAGGCTG CGTT TCTA AACG TTTTTGCATATTTTT TGRD_638 937547 - 936195 - | UDP-N-acetylmuramate-L-alanine ligase TERM 922 937061 - 937048 - G 70 -3.1 -5.07107 | overlap 937038 GAAAGTCTTAAAAAA GAACC GTCG GATTC GTCTGCCTCCACAAC TERM 923 937185 - 937198 + g 79 -8.1 -4.15453 | opp_overlap 937184 937180 937185 AACAAGAGAAGTAAG CGACG TAGT CGTCG TTTTACCGTGAGTTC TGRD_639 939243 - 938077 - | putative class I and II aminotransferase TGRD_640 940091 - 939318 - | dihydrodipicolinate reductase TGRD_641 941148 - 940273 - | dihydrodipicolinate synthase TERM 924 941059 - 941073 + g 81 -7.2 -4.57073 | AACTCCTTTTTTGTA CTGATT TTC AATCAG TTTTTCAAAGGCATC TERM 925 941162 - 941174 + r 72 -9.1 -2.52017 | opp_overlap 941152, overlap 941161 941160 ATAAATCCCCCATGA GACGC TTC GCGTC AGTTTTGAGTTTAGA TGRD_642 942121 - 941297 - | diaminopimelate epimerase TERM 926 942001 - 942013 + g 78 -4.1 -5.40072 | overlap 942002 CACCGATTGAATATT TTCTG TCA CAGAG TTTTTTTGCAAGAGC TGRD_643 943552 - 942320 - | diaminopimelate decarboxylase TGRD_644 946603 - 945275 - | argininosuccinate lyase TERM 927 945685 - 945667 - G 76 -5.9 -4.59853 | CCAATGCGTCAAAAA CAGGTGG CTTGT CCTCCTG TAAATCTCTGTTATA TERM 928 946174 - 946162 - G 89 -10.5 -4.10161 | GATGAGCCGCCAAAA CCGGC TGG GCCGG CTGCAAATGCGTAAA TGRD_645 951628 - 947033 - | hypothetical protein TERM 929 949714 - 949701 - G 79 -8.1 -4.08216 | opp_overlap 949701 TTATTTTCTTTAAAA TCCGC TATT GCGGA TGCTTCTATGTTGTT TGRD_646 952739 - 951864 - | branched-chain-amino-acid aminotransferase TERM 930 952865 - 952850 - R 75 -4.8 -4.93877 | CCGCAGGAAACAAAA TTTTGA ATAA TCAAAA AATGAGCGAACCCTT TGRD_647 953576 - 952914 - | ABC transporter lipoprotein-releasing system ATP-binding component LolD TERM 931 954213 - 954223 + r 79 -8.2 -3.90729 | overlap 954208 AATGCTGCTGCCGCT GCCG TCA CGGC TTTGTCAAAATTATT TERM 932 954421 - 954443 + r 75 -4.8 -5.02074 | overlap 954439 ACATTAAAACAACTT TATTGCCCAC ACT GACGGCAATA TTTTTTGCAAGCTCG TERM 933 954857 - 954868 + r 74 -3 -5.22039 | opp_overlap 954857 AGTAGCAATTAGAGA GAAA AACT TTTC TTTTTTGCCTTTAAG TGRD_648 956400 - 954931 - | lysyl-tRNA synthetase TERM 934 956681 - 956665 - H 77 -5.2 -4.99947 | TCTAAGTAAACAAAA TGCATA AAAAA TATGCA CAGATCTACACTTAT TERM 935 956706 - 956720 + H 76 -2.8 -5.44119 | opp_overlap 956706 ACTTATCAAATGAAA GAGC ATAATTC GCTC TTTTTTTAACATAAA TGRD_649 956889 - 957905 + | hypothetical protein TERM 936 959720 - 959736 + T 87 -10.9 -3.47751 | opp_overlap 959718 ACAAGCTATAAAGTC TGCCGAA TTT TTCGGCA TTATACATTATTACA TERM 937 959759 - 959769 + T 80 -2.6 -5.66926 | opp_overlap 959747 959759 TTATTACAGACACTA TAAA ACT TTTA TTTTCTTTTTTTTCA TERM 938 962705 - 962715 + T 73 -4 -5.1675 | TATGAATACTTTATC TCTA TGA TAGA TTTTTTGGTAAGTGC TGRD_650 965338 - 964622 - | competence protein F TERM 939 966395 - 966412 + H 83 -2.1 -5.7946 | gap 1, overlap 966397 CATTTCAGGACATGC GA-GTATA TTT TATACGTC TTTTTTTGTTCCCGC TGRD_651 966875 - 968029 + | permease YjgP/YjgQ family protein TGRD_652 968029 - 969114 + | permease YjgP/YjgQ family protein TERM 940 969116 - 969132 + F 75 -8.1 -3.79419 | opp_overlap 969116 969115 969119, overlap 969115 969119 AAGTAAAGAAATGAT GAATCTT AAG AAGATTC TATTTTATGAAAAAA TERM 941 969701 - 969722 + G 74 -5.1 -4.85267 | AGTATTTGCGGCTGT TCTTGCGGG ACCG TCTGCAGGA TTTTTAATAATTTCT TGRD_653 969396 - 970082 + | CbiM-like Co2+ ABC transporter permease component TGRD_654 970075 - 970350 + | CbiM-like Co2+ ABC transporter permease component TGRD_655 970383 - 971153 + | NCAIR-related protein TGRD_656 971153 - 972400 + | hypothetical protein TGRD_657 972397 - 973233 + | hypothetical protein TERM 942 973514 - 973534 + T 80 -2.6 -5.65927 | opp_overlap 973514 ACAAAACTAAAAATT GAGTTTTT CATCT ATAAACTC TTTTTTATTTACCTA TGRD_658 974557 - 973673 - | tyrosine recombinase XerD TERM 943 974818 - 974804 - R 85 -4.2 -5.75945 | opp_overlap 974813, overlap 974806 974813 ATTCCGGAAAAAAAA GAGAAC TCA GTTCAC AGAACTTTAACACTC TERM 944 974816 - 974806 - R 71 -5.4 -4.52949 | opp_overlap 974813, overlap 974804 974813 TCCGGAAAAAAAAGA GAAC TCA GTTC ACAGAACTTTAACAC TERM 945 976012 - 975996 - R 72 -9.5 -2.54193 | TATTATTTTAACTCA TGTTCCA TTC TGGAACA ACCAGCCTGCAGAGC TERM 946 976073 - 976092 + r 93 -8 -5.4148 | TCTATGCCTATTATT TACATTGA TTTT TCAATGTA TTTTTTCGTTATTTA TERM 947 976210 - 976189 - R 95 -5.1 -6.4753 | opp_overlap 976189 GGAAACAAAAAAAAA GAGCCTGTA TTTC TGCAAGCTC TTAATTAATTACTAT TGRD_659 977686 - 977063 - | putative Zn-dependent hydrolase TERM 948 977518 - 977500 - G 70 -8.9 -3.00946 | opp_overlap 977499 977498, overlap 977502 GGTCGTCAGAAAGTA CATGGTC GTAAT GACCATG CGTATTTATAAGTAG TGRD_660 979364 - 977778 - | hypothetical protein TERM 949 978734 - 978746 + g 91 -6.3 -5.60993 | ACTCCATAAACTTCA CATCT TGC AGATG TTTTTTTGTAAGCAA TERM 950 979387 - 979403 + r 70 -8.1 -3.1582 | overlap 979386 TATATTATATCATTA TTGACAA AGA TTGTCAA CTTTTAATGCAATAA TERM 951 980080 - 980066 - R 83 -2.1 -5.80817 | overlap 980067 GGCAATATAAAAAAA CTGCT GTTAA AGCAA GCTGCATTCCGCGGA TERM 952 981691 - 981713 + r 70 -7.1 -3.81414 | AAGCGGCACTTTGTT TTCCTCAAA CTCTT TTTGGGGAA TTATTCCTTCGGACT TGRD_661 982848 - 981946 - | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase TERM 953 982558 - 982570 + g 84 -3.5 -5.62288 | AGGACATGCGGCATC TATTA CGT TAATA TTTTTATTTTCTTCA TGRD_662 983444 - 982902 - | 1-acylglycerol-3-phosphate O-acyltransferase TERM 954 983357 - 983344 - G 80 -2.4 -5.68023 | GTAGAATCAAAAAAA CCTA TGTGGT TAGG AGCAATAACAGCTCC TGRD_663 984775 - 983483 - | 3-phosphoshikimate 1-carboxyvinyltransferase TERM 955 984275 - 984243 - G 79 -7.1 -4.41348 | overlap 984245 984256 984257 CCGTCGGCAAATAAA CCCGCAAATAAAATC GCA GATTTTACCTGCGCA GTCGACTTGTCACTT TERM 956 984273 - 984245 - G 82 -11.9 -2.54371 | overlap 984243 984256 984257 GTCGGCAAATAAACC CGCAAATAAAATC GCA GATTTTACCTGCG CAGTCGACTTGTCAC TERM 957 984274 - 984256 - G 74 -5.2 -4.88405 | overlap 984245 984243 984257 AACCCGCAAATAAAA TCGCAGAT TTT ACCTGCGC AGTCGACTTGTCACT TERM 958 984273 - 984257 - G 75 -8.7 -3.51958 | overlap 984245 984256 984243 ACCCGCAAATAAAAT CGCAGAT TTT ACCTGCG CAGTCGACTTGTCAC TGRD_664 987855 - 986833 - | 3-deoxy-7-phosphoheptulonate synthase TGRD_665 989030 - 987897 - | histidinol-phosphate aminotransferase TERM 959 988433 - 988411 - G 72 -7.8 -3.65827 | opp_overlap 988414, overlap 988414 988426 988428 TAATCTTCATCTAAA GACGCATATT CAA AATATGCTTC GTCAAGCACAACAAT TGRD_666 990320 - 989241 - | chorismate mutase/prephenate dehydratase TGRD_667 991264 - 990626 - | endonuclease III TERM 960 991211 - 991221 + g 74 -2.6 -5.3798 | overlap 991217 TACATGCCCGTAATC TTTT TCT AAAA TTTTTATTATTCTTA TGRD_668 992036 - 991251 - | inositol-1-monophosphatase TERM 961 992835 - 992851 + r 71 -8.7 -3.06815 | opp_overlap 992805 TTGAACCCGCGATCT CTGCCTT GAC AGGGCAG TGTGTTAACCAGGCT TGRD_669 994203 - 992953 - | serine hydroxymethyltransferase TERM 962 993138 - 993153 + g 78 -6.8 -4.60487 | AACCGATTCTTATTC CTGACG TCAT CGTCGG TTTTTCAAGGTCATA TGRD_670 995166 - 994558 - | Sua5-related translation factor TGRD_671 996466 - 995264 - | glutamate N-acetyltransferase/amino-acid N-acetyltransferase TERM 963 995563 - 995542 - G 100 -8.7 -4.72272 | CGTCCGCACCAAAAA TCGCCGTTT TAAA AAGCGGCGA CGTAGCTATTGTTGA TGRD_672 997509 - 996490 - | N-acetyl-gamma-glutamyl-phosphate reductase TERM 964 997066 - 997088 + g 81 -4.1 -5.58522 | overlap 997070 CGTAGGATAACATCC GGGGTTTGC AATTA GCAAAGCTC TTTTTATTTTCTCTG TGRD_673 998123 - 999217 + | DprA-like DNA processing protein TERM 965 999324 - 999299 - gf 78 -5.7 -4.94672 | gap 1, opp_overlap 999298 AAACAATATCAAAAA TTTTA-GGTAAA GAT TTTACCGTAAAA AGTTCTTATGGACAT TERM 966 1000763 - 1000750 - gf 73 -3.9 -5.0538 | opp_overlap 1000743 CTTGACGGCAAAAAA TTTGT TCCT ACAAA TCGCGGCATTGTCGT TGRD_674 999241 - 1001463 + | DNA topoisomerase I TERM 967 1001733 - 1001723 - gf 72 -4 -4.96388 | AATTATTAAAGAAAA TTTC ATA GAAA GCATGCCGGCAAGTC TGRD_675 1001382 - 1002326 + | tyrosine recombinase XerC TGRD_676 1002654 - 1003136 + | hypothetical protein TERM 968 1003141 - 1003126 - T 77 -3.2 -5.45652 | AGTCGGAAGAAAAAA CGGCAT CATG ATTCCG CTTCCGGCCAATGGT TERM 969 1003607 - 1003593 - T 72 -2.8 -5.31275 | opp_overlap 1003593 CCTGACTACAAAAAA GAAGAA AAA TACTTC TCCTTTATTTTTCAA TERM 970 1003824 - 1003786 - T 73 -9 -3.15621 | overlap 1003785 1003782 CCAAACATAAACAAT CTGCAATAGCTTAACACT ATA AATGTAAAGATATCGCAG GTGCAGGATACAAAT TERM 971 1004066 - 1004032 - T 100 -19.6 -5.66989 | overlap 1004064 TAAACACTAAAAAAA GCACTTTCGATATCTC TTA AAGATATCGAAAGTGC AGTGGAAGCCGCAGA TERM 972 1004881 - 1004892 + T 76 -4.4 -5.03314 | overlap 1004869 TATTCGAGTTTTGTC GACT TCCT AGTC TTTTTTCAAGATGAA TERM 973 1005088 - 1005069 - T 77 -5 -5.0707 | opp_overlap 1005081 AAAGAGAAAAACAAA GCCAAACA AATA TTTTTGGC ACAAGAATGCTTTTG TERM 974 1006027 - 1005998 - T 100 -15.7 -5.00616 | opp_overlap 1005998 TTCCCGTTTAAAAAA GCAGCCTCCGGGC AAAA ACGCGGAGGCTGC TTTTTTATCTCAACA TERM 975 1005998 - 1006027 + T 100 -15 -5.36441 | opp_overlap 1005998 TTCCCGTTTAAAAAA GCAGCCTCCGGG CAAAAA CGCGGAGGCTGC TTTTTTATCTCAACA TGRD_677 1007683 - 1006055 - | chaperonin Cpn60 TERM 976 1007199 - 1007217 + g 76 -6 -4.59089 | ACTTTTTCCATTGCA TCGGCAAT CAA ATTTCCGA TTTCTTTATCACTTG TGRD_678 1007993 - 1007709 - | chaperonin Cpn10 TERM 977 1008167 - 1008180 + r 73 -8.1 -3.53012 | TTTATATTTTATATT TCCGC GCAC GCGGA TTTACCGGAAGAAGC TERM 978 1008357 - 1008381 + r 74 -2.1 -5.46629 | overlap 1008358 GAATATTTTTATCGA TTGACGTTTAT AAA ATAAGCGGCAC TTTTTTTGAAATGTT TERM 979 1009106 - 1009119 + r 71 -5.3 -4.55023 | opp_overlap 1009106 TTTATAATGGAATAT TCTGT TTTG ACAGA TTTTGTAATCTTAAC TGRD_679 1009854 - 1009486 - | putative 6-pyruvoyl tetrahydrobiopterin synthase TGRD_680 1010693 - 1009866 - | glutamate racemase TERM 980 1010249 - 1010232 - GR 75 -6.9 -4.21989 | opp_overlap 1010231 1010234 CACAAGCGGAACAAA CAGCGGG CATG CCTGCTG ATATACTTTAGATTT TGRD_681 1012158 - 1010659 - | putative N-acetylmuramoyl-L-alanine amidase TGRD_682 1013048 - 1012398 - | ribulose-phosphate 3-epimerase TGRD_683 1013816 - 1013100 - | hypothetical protein TERM 981 1013977 - 1013963 - R 75 -7.1 -4.19238 | GCTTTAACCGCAAAA CGGCA CGTAT TGCCG GGGTGCACCGAAACT TGRD_684 1015192 - 1014194 - | ketol-acid reductoisomerase TGRD_685 1015707 - 1015234 - | acetolactate synthase small subunit TGRD_686 1017825 - 1016089 - | acetolactate synthase large subunit TERM 982 1016785 - 1016765 - G 100 -14.1 -3.29144 | opp_overlap 1016769, overlap 1016769 TCATCTCTGTCATAA GAAAGCGGA TGT TCCGCTTTC CATGCATCAACTGTT TERM 983 1016781 - 1016769 - G 83 -9.1 -4.30719 | opp_overlap 1016769, overlap 1016765 CTCTGTCATAAGAAA GCGGA TGT TCCGC TTTCCATGCATCAAC TERM 984 1016769 - 1016781 + g 78 -9.1 -3.6682 | opp_overlap 1016769 1016765 CTCTGTCATAAGAAA GCGGA TGT TCCGC TTTCCATGCATCAAC TGRD_687 1019586 - 1017937 - | dihydroxy-acid dehydratase TERM 985 1019044 - 1019058 + g 75 -5.7 -4.7329 | overlap 1019049 ACATGCTGCCATTTC CAGCT CTGAA AGCTG TTTTTCGGTAATTTT TERM 986 1020220 - 1020238 + H 100 -8.9 -6.09196 | opp_overlap 1020220 TCCAAGATATACAAA TCCTGCT TAAAT AGCAGGA TTTTTTTGTTTTACC TERM 987 1020238 - 1020220 - H 85 -8.9 -4.21343 | opp_overlap 1020220 TCCAAGATATACAAA TCCTGCT TAAAT AGCAGGA TTTTTTTGTTTTACC TERM 988 1020959 - 1020946 - g 70 -6.7 -4.07678 | overlap 1020948 1020949 1020951 CCTCAAAAGATGAAA GAGGA CGAC TCCTC GCCGGAGCAGCAATA TGRD_688 1020303 - 1021766 + | IMP dehydrogenase TERM 989 1021816 - 1021833 + T 83 -2 -5.9218 | CAAGTTTAATACGCT TGGGAT GATTTA ATCTCA TTTTTTTATTATATA TERM 990 1022317 - 1022292 - T 100 -11.3 -4.4521 | opp_overlap 1022316, overlap 1022293 ATTATGCAAAAAGAA CCAGTTCTCAA CGCT TTGAGAACTGA AAACGTTTTCTCGCT TERM 991 1022316 - 1022293 - T 91 -12.6 -3.26042 | overlap 1022292 TTATGCAAAAAGAAC CAGTTCTCAA CGCT TTGAGAACTG AAAACGTTTTCTCGC TGRD_689 1022694 - 1022299 - | 30S ribosomal protein S9 TGRD_690 1023138 - 1022707 - | 50S ribosomal protein L13 TERM 992 1023269 - 1023285 + r 73 -9.5 -2.86449 | TCGCATTTCATCGCC TGACTGT TAA ACAGTCA TAATTATCGTGACAT TGRD_691 1024157 - 1023402 - | 23S rRNA methyltransferase TGRD_692 1025677 - 1024280 - | cysteinyl-tRNA synthetase TERM 993 1024852 - 1024869 + g 83 -2.1 -5.85425 | gap 1, opp_overlap 1024852, overlap 1024855 TTAACGTAAAAAAGT TGTTCAAA GAT TTTGA-CA TTTTTTCTTTATTTA TERM 994 1025072 - 1025082 + g 72 -8.2 -3.64371 | overlap 1025067 1025076 GCCCGGACGACCCTT GCCC CAG GGGC TTTCCCATGTAACTT TGRD_693 1026156 - 1025674 - | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase TGRD_694 1027133 - 1026474 - | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase TGRD_695 1028124 - 1027303 - | shikimate dehydrogenase TERM 995 1027744 - 1027756 + g 70 -3.5 -5.05782 | GCCAGCTCCGATTAC TAAAA CAT TTTTA TTTTTTAAGCTGACT TERM 996 1028565 - 1028528 - g 79 -3.5 -5.4505 | TCGCTTAAGAAAAAA GGGCATTGTCTATAAAA AATA TCTCACAGAAAATGTCC CTAAAAATTTATCTG TGRD_696 1028289 - 1029737 + | cardiolipin synthase TERM 997 1030561 - 1030547 - g 80 -10 -3.56161 | overlap 1030544 GAATGGATTATAGAA CCCGAA GGT TTCGGG GAAACCAGAATAAAC TGRD_697 1030088 - 1030978 + | hypothetical protein TERM 998 1031619 - 1031607 - g 90 -4.1 -5.89921 | ATTAGAAGAAAAAAA CGCAA AAA TTACG GATTTAAACAGAATT TERM 999 1031816 - 1031796 - g 74 -2.5 -5.32944 | overlap 1031788 CGCAGAAGCAAAAAA CCTTGCCAA CGC TTTGAAAGG AGACAATAAACTTCA TERM 1000 1032300 - 1032284 - g 76 -5.9 -4.62069 | TGGCTACGTTAAAAA CCATACA ATA TATATGG CGGCAGGAAAACCAG TGRD_698 1031053 - 1032582 + | DNA recombination protein RmuC homolog TERM 1001 1033028 - 1033016 - g 70 -3.4 -5.011 | ATTGAAACAATAAAA TGGT GCCAG ACCA ACGACGTAAAAAAAA TERM 1002 1033189 - 1033179 - g 74 -4.6 -4.96848 | GGCGGTATATAAAAA GCCA TAC CGGC AATCCCAAAAATGAT TGRD_699 1032569 - 1033252 + | putative ribonuclease HI TERM 1003 1034913 - 1034901 - g 78 -6.3 -4.76087 | overlap 1034909 1034912 TACATAATAAAGAAA TGTAC AGA GTACA AAAGATTTGTAATAA TGRD_700 1034136 - 1035143 + | putative pyruvate kinase TGRD_701 1035776 - 1036492 + | zinc transporter ZupT TGRD_702 1037914 - 1037312 - | hypothetical protein TERM 1004 1037736 - 1037715 - G 73 -5.3 -4.57569 | overlap 1037716 TCAGGTCTGTAAAAA CCTTTAAAA TTAT TTTTAAAGA AATTATTAAGTCTGA TGRD_703 1038660 - 1037899 - | hypothetical protein TERM 1005 1038656 - 1038639 - G 75 -5.5 -4.77757 | opp_overlap 1038642, overlap 1038642 TTTTAAAAATTAAAA TAACGGG CATT CCCGTTC TCATTCCAACTGGAA TERM 1006 1038653 - 1038642 - G 79 -7.2 -4.47007 | opp_overlap 1038642, overlap 1038639 TAAAAATTAAAATAA CGGG CATT CCCG TTCTCATTCCAACTG TGRD_704 1041527 - 1039113 - | pyrophosphate-energized proton pump TERM 1007 1040294 - 1040311 + g 73 -5.7 -4.64766 | opp_overlap 1040294 1040293 1040305 TCTGTACAAAAGCAC TTTTTAC GGAA GTAAAAA TTTTTACGATCTCCG TERM 1008 1041559 - 1041575 + r 74 -2.3 -5.56673 | overlap 1041561 1041562 TATTTCTCAATTTTA CATTTTT TTC AAAAAAG TTTTTTCTTCTGCCT TGRD_705 1041954 - 1041556 - | putative nucleotide pyrophosphohydrolase MazG TGRD_706 1044719 - 1043856 - | 5,10-methylenetetrahydrofolate reductase TGRD_707 1045717 - 1045478 - | hypothetical protein TGRD_708 1046298 - 1045714 - | peptidyl-tRNA hydrolase TGRD_709 1047065 - 1046346 - | 50S ribosomal protein L25 TERM 1009 1046730 - 1046702 - G 70 -8.1 -3.41126 | overlap 1046703 CTATAAATTCCATAA CGCCGCCGAAGTT TTT AACTCCATCGGCA ACACCGGCAATATGA TERM 1010 1046729 - 1046703 - G 72 -9.4 -2.64194 | overlap 1046702 TATAAATTCCATAAC GCCGCCGAAGTT TTT AACTCCATCGGC AACACCGGCAATATG TERM 1011 1046837 - 1046824 - G 81 -5.3 -5.08824 | opp_overlap 1046824 TGCTGAGTTAAAAAA TCTCT GTCC AGAGA TTTTACTATCGCCGC TERM 1012 1046977 - 1046992 + g 76 -6.8 -4.4078 | TTTCCGTAAAATATC GCGGGA ATTT TTCCGC TTTTCCTTAAAAACG TGRD_710 1048113 - 1047181 - | ribose-phosphate pyrophosphokinase TGRD_711 1049551 - 1048196 - | UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase TERM 1013 1048808 - 1048821 + g 70 -2.5 -5.23765 | ACTGACGCCGTTGCT TAAAA GTTC TTTTA TTTTTCTGTTATTTA TERM 1014 1050324 - 1050338 + r 75 -5 -4.83759 | ACTACTTGCTTATTT TATGCG CCG CGTATA TTTTTAACTTTCGTT TERM 1015 1050416 - 1050426 + r 72 -2.6 -5.28683 | overlap 1050421 TCATATCAAGTCAAG TTAA GTA TTAA TTTTTTAATATTAAT TGRD_712 1052147 - 1051551 - | DNA polymerase III epsilon subunit TGRD_713 1053976 - 1052387 - | RNA-metabolising metallo-beta-lactamase TERM 1016 1053279 - 1053267 - G 76 -3.3 -5.27023 | overlap 1053269 ATCGTAAAAACAAAA CAGGC GGA ACCCG GCACATGTCCGGCAT TERM 1017 1053531 - 1053541 + g 76 -4.6 -5.20783 | overlap 1053530 ACTTTGCCGTTGTTA GCGT AGC GCGC TTTTTCTCTTTGACT TERM 1018 1055303 - 1055314 + H 83 -2.2 -5.88476 | GCTGCATGTTTAATA TGCA CTAA TGCG TTTTTTCTTTCTTTT TGRD_714 1055559 - 1056212 + | putative histidinol phosphatase TGRD_715 1056215 - 1056859 + | hypothetical protein TERM 1019 1056977 - 1056966 - g 73 -5.8 -4.40894 | TAAAGTATACTAAAA CCCA TGAA TGGG TAAAAATTGACGGCA TGRD_716 1056932 - 1057306 + | glycine cleavage system H protein TERM 1020 1057909 - 1057893 - g 72 -3.7 -4.96848 | opp_overlap 1057893 GGCGTGATAGAAAAA GATGC CGTTGAT GCATC TGTTGACGACGATAC TGRD_717 1057323 - 1058654 + | glycine cleavage system P protein subunit 1 TERM 1021 1060208 - 1060198 - f 71 -3.2 -5.07011 | TACAGAAAGCAAAAA GGAA AAG CTCC ATTAATTATCAGGTT TERM 1022 1060327 - 1060317 - f 84 -6.8 -5.14985 | overlap 1060318 1060319 TCAAAGAGATAAAAA CCGT CCT ACGG ACTCGACATTAAAAT TERM 1023 1061596 - 1061586 - g 70 -6.8 -4.07687 | ACTGTTTCTTTAAAA TCGG AGT CCGA CGGAAGCATATTGCC TERM 1024 1061664 - 1061683 + G 81 -8.6 -4.08394 | GCAGTTATGCTTACC GTTCCCAA CACT TTGGGAGC TTTTGAAAAAAATAT TGRD_718 1061040 - 1062476 + | glycine cleavage system P protein subunit 2 TERM 1025 1062546 - 1062536 - g 78 -5.4 -5.03747 | AAAGCCGGGAAAAAA GTGA TTT TCAC AAATGGCTGTTTCGA TGRD_719 1062461 - 1062943 + | ADP-heptose synthase TERM 1026 1063315 - 1063341 + F 76 -6.7 -4.56775 | opp_overlap 1063317 CGCAGGAATCTTTAA GAGTTTTAGAA GAATA TTCAAAAACTC TTTTTCCAAAAGCAT TGRD_720 1063857 - 1065122 + | thiamine biosynthesis protein ThiC TGRD_721 1065607 - 1065140 - | hypothetical protein TERM 1027 1065478 - 1065496 + g 86 -6.7 -5.07486 | opp_overlap 1065469 1065467, overlap 1065480 AATTGACATGCAGTA TTGCCAG CATGC CTGGCGA TTTTTCTTGAAACTC TGRD_722 1067262 - 1067789 + | hypothetical protein TERM 1028 1068421 - 1068404 - g 75 -5.5 -4.74084 | overlap 1068398 1068406 AAATTAAAAGCAAAA TACGGCA TTTT TGCCGTC TCGGGAAACCATGAA TERM 1029 1068419 - 1068406 - g 77 -8.1 -3.95369 | overlap 1068398 1068404 ATTAAAAGCAAAATA CGGCA TTTT TGCCG TCTCGGGAAACCATG TGRD_723 1067786 - 1068880 + | putative metallophosphoesterase TGRD_724 1070379 - 1069045 - | DNA repair photolyase-like protein TGRD_725 1071049 - 1070369 - | hypothetical protein TERM 1030 1071291 - 1071307 + r 80 -9.4 -3.65351 | opp_overlap 1071290 1071289 TTAAGCCTTAAAATC TCCCGG TATCT CCGGGA TTTGCATGGAAATCC TGRD_726 1073647 - 1071329 - | ATP-dependent UvrD family DNA helicase PcrA TERM 1031 1074519 - 1074498 - g 93 -12.3 -4.34402 | GCCGTCATAGGAAAA TCGGCGGAC AACA ATCCGCCGA AAAACAGCTGGCAAC TGRD_727 1074066 - 1074566 + | NADH dehydrogenase/NAD(P)H nitroreductase TERM 1032 1075688 - 1075678 - g 70 -6.8 -4.15044 | opp_overlap 1075674 CTCGCTTGTAAGAAA CGGA CTG TCCG TAACTATGTCAACTC TGRD_728 1074563 - 1076221 + | arginyl-tRNA synthetase TERM 1033 1077298 - 1077280 - g 75 -9 -3.48276 | opp_overlap 1077279 1077292 TGCGGTGGCAGAGAA GTAAATCT GAG AGATTTAC AATCTTGGATATTTC TGRD_729 1076476 - 1077435 + | biotin synthase TERM 1034 1077646 - 1077617 - f 77 -9.3 -3.1855 | TTTTTTAATATTCAA TGCGGCGAAAAAG TCCT CTTCTCCGCCGTA AAAAGGTACAAGCAT TERM 1035 1077806 - 1077782 - f 78 -2.2 -5.66338 | overlap 1077783 1077785 AAACACAAGAAAAAA CTATATAGAG TTCTC CTCTATATCA ACTTCTTTCTTTTCA TERM 1036 1078918 - 1078928 + G 73 -3.2 -5.17353 | AACGTGGATGCTGGC TCTG GGA CAGG TTTTTTACTCACTGT TGRD_730 1078256 - 1079566 + | putative sodium-dependent proline transporter TERM 1037 1079632 - 1079588 - T 74 -5.8 -4.59774 | gap 1, opp_overlap 1079599 TAAATAAAATATAAA GCGACAAAGAACGCCGGAGAT TAAA ATTTTCGGCGTT-TTTCCCGC ATCCTTGACCCAATT TERM 1038 1079599 - 1079622 + T 100 -9.6 -4.58663 | opp_overlap 1079588 TAAAGCGACAAAGAA CGCCGGAGAT TAAA ATTTTCGGCG TTTTTCCCGCATCCT TERM 1039 1080735 - 1080716 - T 80 -6.4 -4.7373 | CTATTGCACGAAAAA CCGTTTGC GGGA GTAAACGG CTCGGGAAAACATTT TERM 1040 1082248 - 1082202 - T 100 -17 -4.37886 | opp_overlap 1082214, overlap 1082208 1082214 GCAGTTGGCACAAAA TCAACATCAAAAGTCCTCTAAT GAT ATTAGAGGACTTTTGAAATTAA AGGAAAAATCAAGAT TERM 1041 1082242 - 1082208 - T 100 -20.4 -3.45405 | opp_overlap 1082214, overlap 1082202 1082214 GGCACAAAATCAACA TCAAAAGTCCTCTAAT GAT ATTAGAGGACTTTTGA AATTAAAGGAAAAAT TERM 1042 1082214 - 1082236 + T 100 -13.6 -4.19238 | opp_overlap 1082208 1082202 1082214 AAATCAACATCAAAA GTCCTCTAAT GAT ATTAGAGGAC TTTTGAAATTAAAGG TERM 1043 1082236 - 1082214 - T 100 -13.6 -4.47307 | opp_overlap 1082214, overlap 1082208 1082202 AAATCAACATCAAAA GTCCTCTAAT GAT ATTAGAGGAC TTTTGAAATTAAAGG TGRD_731 1086179 - 1084590 - | putative (R)-citramalate synthase TGRD_732 1087812 - 1086559 - | aspartate kinase TGRD_733 1089065 - 1088148 - | homoserine kinase TGRD_734 1089347 - 1089120 - | hypothetical protein TERM 1044 1089552 - 1089540 - R 71 -5.5 -4.58303 | overlap 1089535 GTAAATATTATAAAA CCCGA GTT TCAGG TTAAGCAAAATTTCT TERM 1045 1090195 - 1090185 - R 73 -4 -5.04385 | opp_overlap 1090185 TACAGCTGTAAAAAA GAAT TCT ATTC ATTCCTGCCATTGGT TERM 1046 1090598 - 1090576 - R 82 -7.8 -4.57073 | opp_overlap 1090569 1090576 CATTTCTTTTAAAAA CGATAAAGAA AAG CTCTCTATCG TTTCTTAACTTGTCT TGRD_735 1093004 - 1091772 - | serine transporter TERM 1047 1091986 - 1091976 - G 78 -5.4 -4.95896 | AGAAACCGACAAAAA CCAT ATT ATGG CAAACAATACTGCAG TERM 1048 1092322 - 1092293 - G 73 -2.1 -5.35365 | overlap 1092297 1092302 AAAACATAACAAAAA TCAACAAAAGAAC AGAA GTCCATTTGACGA CAAGATCTGTATGTT TERM 1049 1093063 - 1093040 - R 90 -8.2 -5.31158 | opp_overlap 1093040 TAAAAAAAGCAAAAA CGCTAAAGAT TTTA ACCTTCAGCG CTTTTTCTGTTTTTT TERM 1050 1093183 - 1093201 + r 77 -9 -3.54459 | opp_overlap 1093187, overlap 1093187 ATATATATTGAAGCG TAAAGCAA CCT TTGCTTTA TTTAAAACACATTCC TGRD_736 1094511 - 1093216 - | adenylosuccinate lyase TGRD_737 1095238 - 1094615 - | phosphoribosylglycinamide formyltransferase TGRD_738 1096122 - 1095805 - | hypothetical protein TGRD_739 1097225 - 1096263 - | phosphoribosylformylglycinamidine cyclo-ligase TERM 1051 1096976 - 1096964 - G 95 -6.9 -5.29885 | overlap 1096959 AATCTAAAAAGAAAA GAGGC TTT GCCCC TGCACATATTAAATC TERM 1052 1097617 - 1097630 + r 77 -9.5 -3.26531 | overlap 1097616 1097618 CTGCCTAATTTCTTC GCGGC AATA GCCGC TGTTCCTGTTCCTAC TERM 1053 1097725 - 1097744 + r 74 -9.2 -3.06117 | opp_overlap 1097725, overlap 1097720 1097730 ACAGGCAGTTGACAA GGATGGGG GTAT CCCCTTCC TGTACTTATTGTGTT TERM 1054 1097744 - 1097725 - R 79 -9.2 -3.33671 | opp_overlap 1097725 1097720 1097730 ACAGGCAGTTGACAA GGATGGGG GTAT CCCCTTCC TGTACTTATTGTGTT TERM 1055 1097730 - 1097740 + r 72 -8.2 -3.35176 | opp_overlap 1097725, overlap 1097725 1097720 CAGTTGACAAGGATG GGGG TAT CCCC TTCCTGTACTTATTG TGRD_740 1098418 - 1097903 - | hypothetical protein TGRD_741 1099527 - 1098943 - | orotate phosphoribosyltransferase TGRD_742 1100816 - 1100172 - | orotidine-5'-phosphate decarboxylase TERM 1056 1100288 - 1100299 + g 76 -4.4 -5.19212 | TAACTGCAGCTTCCG GAGT CGAC ACTC TTTTTTGATCATCGT TERM 1057 1100433 - 1100443 + g 70 -3.2 -4.92314 | overlap 1100431 CCCACAGGTTTTTGC GAGT TTT GCTC TTTTTATAACTTCCT TGRD_743 1101889 - 1100969 - | dihydroorotate dehydrogenase catalytic subunit TERM 1058 1101085 - 1101071 - G 71 -8.6 -3.17486 | AATAATTGCTATTAA GTTTCC GGG GGAAAC TAAACTTGAACTTCC TERM 1059 1101734 - 1101750 + g 80 -6.5 -4.82901 | CAAATTCCCCGCACG CGGTTCC AGA GTAACCG TTTTTGTCACAACCC TGRD_744 1102670 - 1101891 - | hypothetical protein TGRD_745 1103592 - 1102660 - | DNA modification methylase TGRD_746 1104661 - 1103786 - | dihydroorotate dehydrogenase electron transfer subunit TGRD_747 1106173 - 1104905 - | dihydroorotase TERM 1060 1105427 - 1105404 - G 73 -5.3 -4.56914 | opp_overlap 1105404 1105406, overlap 1105407 TCAGTTAAAGTAAAA TAATGCGGA CAAGTT TCCGCAGTA ACTTTTATACTCTTT TERM 1061 1105424 - 1105407 - G 79 -7 -4.38472 | opp_overlap 1105406 1105404, overlap 1105404 GTTAAAGTAAAATAA TGCGGA CAAGTT TCCGCA GTAACTTTTATACTC TGRD_748 1107095 - 1106157 - | aspartate carbamoyltransferase TERM 1062 1106766 - 1106749 - G 79 -11.3 -2.90075 | opp_overlap 1106746 TTTCTTGCAAGTATA TCTGGCG CTCC CGCCAGA GAATGTCTGATGATC TGRD_749 1107651 - 1107118 - | uracil phosphoribosyltransferase TGRD_750 1108186 - 1107653 - | phosphoribosylaminoimidazole carboxylase TGRD_751 1109450 - 1108170 - | phosphoribosylamine-glycine ligase TERM 1063 1109529 - 1109513 - R 95 -3.1 -6.34424 | CCTGCAAAAAAAAAA TTCATTT CTA AAATAAA CGCAATTATCTCGTC TGRD_752 1112914 - 1112129 - | phosphoribosylformylglycinamidine synthase I TGRD_753 1115464 - 1113035 - | phosphoribosylformylglycinamidine synthase II PurL TERM 1064 1113411 - 1113426 + g 81 -4 -5.56568 | TCTATTAAATTTTCA TTTGCC GCCC GGTAAA TTTTTTTCATAATGT TERM 1065 1114118 - 1114098 - G 78 -9.1 -3.76607 | opp_overlap 1114098 1114097 1114112, overlap 1114092 GAACAGACATTCAAA TCTGAAAGC AAA GCTTTCAAA GTTTCTGAAATTTCA TERM 1066 1115185 - 1115205 + g 70 -5.5 -4.43909 | overlap 1115176 1115178 1115182 AAATAGTTTCTTTGA GAAGATTAT TGT ATACTCTTC TTGTTTTCTTACCGT TGRD_754 1116001 - 1115465 - | phosphoribosylformylglycinamidine synthase II PurS TERM 1067 1115707 - 1115721 + g 88 -8.5 -4.59109 | GACAGATCGCGGAAT CGGCG CAAGT CGCCG TTTTTGAGACATCTA TGRD_755 1116879 - 1116001 - | phosphoribosylaminoimidazole-succinocarboxamide synthase TERM 1068 1117311 - 1117345 + r 71 -3.3 -5.10461 | overlap 1117313 1117315 CTTTTTGATTTTTTT TGGGGGGGGCGGCCG AGGCG CGTGCGCCCCCTGTG TTTTTATTGCCTGCC TERM 1069 1117315 - 1117341 + r 89 -10.7 -3.6707 | overlap 1117313 1117311 TTGATTTTTTTTGGG GGGGGCGGCCG AGGCG CGTGCGCCCCC TGTGTTTTTATTGCC TGRD_756 1118201 - 1117896 - | hypothetical protein TERM 1070 1118938 - 1118924 - H 71 -8.6 -3.08342 | opp_overlap 1118935, overlap 1118922 AACAAAAATACCACA CCTCAA GGA TTGAGG AAAACCTCTCTTCAC TGRD_757 1119166 - 1119678 + | hypothetical protein TERM 1071 1119789 - 1119777 - f 80 -4.8 -5.35354 | GAGACAATCAAAAAA GGAG ATTTG CTCC GGAAGAATACAGAAA TERM 1072 1119820 - 1119807 - f 73 -3.9 -5.1383 | opp_overlap 1119818, overlap 1119816 AAGAATACAGAAAAA TAATG ACAA CATTA AAATTTAATGAATTA TERM 1073 1120125 - 1120109 - g 88 -5.1 -5.63645 | opp_overlap 1120108 TCAAAATACAAAAAA GGCATTA ACA TAGTGCC GGTTTACGGCGGGCA TERM 1074 1120821 - 1120809 - g 86 -10.5 -3.70081 | ATAGAATCGGAAGAA CCGGC AGA GCCGG AAAAGCCGGCAAAGC TGRD_758 1119809 - 1121440 + | DEAD-box ATP-dependent RNA helicase TERM 1075 1122524 - 1122534 + G 91 -6.8 -5.40072 | opp_overlap 1122524 GAAAAAAAAGACGAA GTGC TGT GCAC TTTTTTTAAAGCGCC TERM 1076 1122778 - 1122764 - g 70 -6.4 -4.10453 | opp_overlap 1122764, overlap 1122753 GAAATGTCCGCAAAA GCTGCT TTA AACAGC CTTTCGGGAGAATTC TGRD_759 1122290 - 1123705 + | tRNA modification GTPase TERM 1077 1124210 - 1124191 - g 71 -8.6 -3.24232 | overlap 1124189 GGTGCGGTAAAGATA CCTACAGA TCTT TCCGTAGG CGCTGTAGTCAAAAA TERM 1078 1124247 - 1124229 - g 71 -8.8 -3.26405 | opp_overlap 1124229 1124228, overlap 1124227 TGTAGTCAAAAATTA TCCTGCCG AAA CCGCAGGA ATTATACCCGGAGAT TERM 1079 1124418 - 1124406 - g 78 -5.5 -5.0133 | overlap 1124407 GATTGTTGCAAAAAA CCCTG TAA CAGGA ATAGGAACAATAGGT TGRD_760 1123819 - 1124871 + | putative zinc metalloprotease TGRD_761 1124991 - 1125788 + | dimethyladenosine transferase SEQUENCE gi|189485765|ref|NS_000192.1| Uncultured Termite group 1 bacterium phylotype Rs-D17 plasmid pTGRD1 DNA, complete sequence (length 11650) TERM 1 819 - 805 - g 80 -8.6 -3.88766 | ATTGCAGATAGGAAA GAAGCT CAC AGCTTC ACAATCTTATACGAC TGRD_P1-1 1 - 1263 + | hypothetical protein TERM 2 1309 - 1297 - f 77 -9.1 -3.33214 | overlap 1295 ATGCGAAGCATAAGA GGAGC GAA GCTCC GTGCCTGTCTTTCCT TERM 3 1585 - 1572 - f 73 -8.1 -3.5771 | AAAAACTGCGTTAAA GGCAC GTTG GTGCC TCAAAAACGCAAAAC TERM 4 1784 - 1771 - f 90 -3.8 -5.91981 | AAAAGCTAAAAAAAA CGGA TGTAAG TCCG TTAAAAAGAGCTGGC TERM 5 1815 - 1794 - f 73 -7.3 -3.90316 | AGTCCGTTAAAAAGA GCTGGCT AAAACTAA AGCCAGC GATAAAGCGTGCATT TERM 6 2056 - 2034 - f 76 -7.8 -3.96534 | opp_overlap 2034 2033 TCTAAAATAATATAA GCCTATGA TTAAATG TCATAGGC GTTTCAAATTGCTCC TGRD_P1-2 2257 - 2673 + | hypothetical protein TERM 7 2968 - 2949 - f 93 -9.3 -4.33907 | TATAAATAGTCAAAA GCCGTCT TAAAGT AGACGGC AAAAAAACAGTAAAA TGRD_P1-3 3192 - 3860 + | hypothetical protein TERM 8 3921 - 3909 - f 77 -9.1 -3.33214 | opp_overlap 3908, overlap 3907 ATGCGAAGCATAAGA GGAGC GAA GCTCC GTGCTTGTAGTTGTC TGRD_P1-4 4058 - 4405 + | hypothetical protein TERM 9 4923 - 4944 + F 93 -5.1 -6.00086 | opp_overlap 4925, overlap 4925 TTATAAATTATGAAA AAGCTTGCA GGAA TGCAGGCTC TTTTTTTTGTGCTGT TERM 10 4942 - 4925 - f 77 -5.5 -4.85267 | opp_overlap 4923 4925 ATAAATTATGAAAAA GCTTGCA GGAA TGCAGGC TCTTTTTTTTGTGCT TERM 11 4925 - 4942 + F 82 -7.7 -4.6341 | opp_overlap 4925, overlap 4923 ATAAATTATGAAAAA GCTTGCA GGAA TGCAGGC TCTTTTTTTTGTGCT TERM 12 5333 - 5315 - f 77 -8.9 -3.55444 | TTCCTATGCCTGAAA CTGCGTT TCAGG AACGCAG GAGCCTAGTAAGGTT TERM 13 5532 - 5546 + F 75 -8.6 -3.42574 | opp_overlap 5525 TGTAAAAAGAGTATG TACGGA TAG TCCGTA TTATGCTCCCGTTGA TERM 14 5781 - 5809 + F 82 -5.3 -5.32944 | opp_overlap 5781 ACGGTAAAGCATAAA GCAAGTATTTGTT GAA AGCCTATACTTGC TTTTTTGCTTGTGCG TERM 15 6006 - 6033 + F 75 -5.1 -4.84918 | gap 1, opp_overlap 6006 6011, overlap 6006 6011 TTAAGGTTGTAATTA C-AAAAGAGAAA ATATC TTTCTCTTTTAG TTTTCTCTTTCTGCC TERM 16 6011 - 6027 + F 74 -5.2 -4.76874 | opp_overlap 6006 6011, overlap 6006 6006 GTTGTAATTACAAAA GAGAAA ATATC TTTCTC TTTTAGTTTTCTCTT TERM 17 6027 - 6011 - f 74 -5.9 -4.5442 | opp_overlap 6011 6006 6006, overlap 6006 GTTGTAATTACAAAA GAGAAAA TAT CTTTCTC TTTTAGTTTTCTCTT TERM 18 6223 - 6235 + F 72 -6.2 -4.33203 | opp_overlap 6223, overlap 6221 TGTCCAGTAGAAGTA GCGG TATTC CCGC TTATTTATTGTCTTG TERM 19 6303 - 6291 - f 72 -2.7 -5.2696 | overlap 6302 TTAAAACCCAAAAAA CAATT AAA AATCG TAAAAACTACGTTAA TERM 20 6333 - 6320 - f 73 -8.1 -3.67026 | AAAAACTACGTTAAA GGCAC GCTG GTGCC TCAAATAACGCAAAA TERM 21 6592 - 6571 - f 73 -7.3 -3.90316 | AGTCCGTTAAAAAGA GCTGGCT AAAACTAA AGCCAGC GATAAAGCGTGCGTA TERM 22 6847 - 6825 - f 93 -10.7 -3.96534 | opp_overlap 6825 6824, overlap 6820 TCTAAAATAATATAA GCCTATGAT TAAAT ATCATAGGC GTTTCCCAATTGCAC TERM 23 6825 - 6847 + F 81 -10.7 -2.76261 | opp_overlap 6820 6825, overlap 6824 TCTAAAATAATATAA GCCTATGAT TAAAT ATCATAGGC GTTTCCCAATTGCAC TERM 24 7100 - 7086 - f 95 -8.6 -5.54403 | AAAAAATAATAAAAA GCAAAC GAA GTTTGC GACCCATCTAACTTG TGRD_P1-5 7367 - 8611 + | hypothetical protein TGRD_P1-6 8633 - 9100 + | hypothetical protein TERM 25 9178 - 9166 - f 77 -9.1 -3.33214 | opp_overlap 9165, overlap 9164 ATGCGAAGCATAAGA GGAGC GAA GCTCC GTGCTTGTAGTTGTC TGRD_P1-7 9315 - 9662 + | hypothetical protein TERM 26 10208 - 10229 + F 93 -5.1 -6.12328 | opp_overlap 10210, overlap 10210 TTATAAATTATGAAA AAGCTTGCA GAAA TGCAGGCTC TTTTTTTTGTGTTAT TERM 27 10210 - 10227 + F 83 -7.7 -4.67703 | opp_overlap 10210, overlap 10208 ATAAATTATGAAAAA GCTTGCA GAAA TGCAGGC TCTTTTTTTTGTGTT TERM 28 10227 - 10210 - f 77 -5.5 -4.85267 | opp_overlap 10210 10208 ATAAATTATGAAAAA GCTTGCA GAAA TGCAGGC TCTTTTTTTTGTGTT TGRD_P1-8 10543 - 10842 + | hypothetical protein TGRD_P1-9 10854 - 11201 + | hypothetical protein SEQUENCE gi|189485775|ref|NS_000193.1| Uncultured Termite group 1 bacterium phylotype Rs-D17 plasmid pTGRD2 DNA, complete sequence (length 5701) TERM 1 594 - 612 + G 77 -10.4 -2.87529 | overlap 593 GTTGACAACTACGCA CGCAAAAA TAT TTTTTGCG ATTATTCATATATGG TGRD_P2-1 1 - 1254 + | hypothetical protein TERM 2 1300 - 1288 - f 77 -9.1 -3.33214 | opp_overlap 1287, overlap 1286 ATGCGAAGCATAAGA GGAGC GAA GCTCC GTGCTTGTAGTTGTC TERM 3 1475 - 1487 + F 72 -6.2 -4.33203 | opp_overlap 1475, overlap 1473 TGTTCAGTAGAAGTA GCGG TATTC CCGC TTATTTATTGTCTTG TERM 4 1555 - 1543 - f 85 -6.3 -5.2696 | TTAAAACGTAAAAAA CGATT AAA AATCG TAAAAACTGCGTTAA TERM 5 1585 - 1572 - f 73 -8.1 -3.5771 | overlap 1564 AAAAACTGCGTTAAA GGCAC GCTG GTGCC TCAAATAACGCAAAA TERM 6 1793 - 1780 - f 95 -6.7 -5.91981 | overlap 1790 AAAAGCTAAAAAAAA CGGAT GTAA ATCCG TCAGACGGACTGTAA TERM 7 1802 - 1790 - f 73 -7.7 -3.7175 | overlap 1780 AAAAACGGATGTAAA TCCGT CAG ACGGA CTGTAAAAAAGAGCT TERM 8 1836 - 1815 - f 75 -7.3 -4.15748 | GGACTGTAAAAAAGA GCTGGCT AAAACTAA AGCCAGC GATAAAGCGTGCGTA TERM 9 2123 - 2135 + F 79 -5.5 -5.02715 | TCTTGATATGCAATT GGGAC GTT GTCTC TTTTTGCTTTAATAT TERM 10 2339 - 2320 - f 93 -9.3 -4.33907 | TATAAATAGTCAAAA GCCGTCT TAAAGT AGACGGC AAAAATAAACAAAAA TERM 11 3977 - 3999 + G 74 -5 -4.7497 | opp_overlap 3979, overlap 3971 GCCATTCCCTCCAAT TATATGATAT TGG ATTTCATATA TTTTTAATGCGTGAA TGRD_P2-2 2656 - 4302 + | hypothetical protein TGRD_P2-3 4708 - 5229 + | hypothetical protein SEQUENCE gi|189485779|ref|NS_000194.1| Uncultured Termite group 1 bacterium phylotype Rs-D17 plasmid pTGRD3 DNA, complete sequence (length 5362) TERM 1 800 - 816 + G 77 -8.1 -3.95449 | TGATACTTGCCGATA TGTATGA AGC TCATACA TTTACTCTCTTATAC TGRD_P3-1 1 - 1275 + | hypothetical protein TERM 2 1290 - 1278 - f 77 -9.1 -3.33214 | overlap 1276 ATGCGAAGCATAAGA GGAGC GAA GCTCC GTGCCTGTCCTTGCC TGRD_P3-2 1470 - 1769 + | hypothetical protein TERM 3 2025 - 1996 - f 72 -5.1 -4.67011 | gap 1, opp_overlap 2003, overlap 2003 AATGTGATGTAAAAA GAGTAT-ATACGGA TAA CCCGTATTATGCTC CCGTTGACTATCAGT TERM 4 2236 - 2265 + F 93 -4.4 -6.01725 | gap 1 ACGGTAAAGCATAAA GGCAAGTTGTTTT TGAAT AGGACA-CTTGCC TTTTTTGTTTTTGTT TERM 5 2464 - 2480 + F 74 -5.2 -4.76874 | opp_overlap 2464 AACGGAGTGTATTAA GAGAAA ATATC TTTCTC TTTTCCTTTTCTCTT TERM 6 2629 - 2617 - f 93 -9.1 -4.54821 | opp_overlap 2613 2610 2617 ATGCGAAGCATAAAA GGAGC GAA GCTCC TTGCTTGTTTTCCCT TERM 7 2617 - 2629 + F 80 -9.1 -3.694 | opp_overlap 2617, overlap 2613 2610 ATGCGAAGCATAAAA GGAGC GAA GCTCC TTGCTTGTTTTCCCT TERM 8 2879 - 2867 - f 100 -6.3 -6.07969 | TAAAACCAAAAAAAA CGATT AAA AATCG TAAAAACTGCGTTTA TERM 9 3115 - 3102 - f 95 -6.7 -5.91981 | overlap 3112 AAAAGCTAAAAAAAA CGGAT GTAA ATCCG TCAGACGGACTGTAA TERM 10 3124 - 3112 - f 73 -7.7 -3.7175 | overlap 3102 AAAAACGGATGTAAA TCCGT CAG ACGGA CTGTAAGTTCGTTAA TERM 11 3166 - 3145 - f 73 -7.3 -3.90316 | AGTTCGTTAAAAAGA GCTGGCT AAAACTAA AGCCAGC GATAAAGCGTGCGTA TERM 12 3265 - 3251 - f 86 -2.9 -5.82388 | AAATGTGAAAAAAAA TCTTA TGTTT TAAGA TGTAAAAGATATGTT TERM 13 3544 - 3512 - f 100 -9.4 -5.09225 | opp_overlap 3511 3503, overlap 3514 ATTCGAGGCAAAAAA TGCCAATTGTATAT ACTTG ATATACAATTGGGA GGTTGTGTCTTTAAT TERM 14 3542 - 3514 - f 84 -12 -2.78405 | opp_overlap 3511 3503, overlap 3512 TCGAGGCAAAAAATG CCAATTGTATAT ACTTG ATATACAATTGG GAGGTTGTGTCTTTA TERM 15 3751 - 3732 - f 93 -9.3 -4.33907 | TATAAATAGTCAAAA GCCGTCT TAAAGT AGACGGC AAAAAAAAAACAGTA TGRD_P3-3 4523 - 4915 + | hypothetical protein