TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.574519 %AT, 1914217 nt, 14950 terms. Intergenic: 0.653326 %AT, H2T: 216357 nt, 2368 terms; T2T: 73913 nt, 1826 terms; H2H: 82532 nt, 1370 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|126207488|ref|NC_009053.1| Actinobacillus pleuropneumoniae L20, complete genome (length 2274482) TERM 1 670 - 682 + G 76 -7.7 -4.20783 | ACGGTGGTACCGGTT TGGGT AAA ACCCA TTTATTACATGCGGT TERM 2 975 - 965 - g 70 -2.6 -5.03145 | overlap 954 TAACTTCCCAAAAAA TATT GAG AATA TCGAAGAACGCATTA dnaA 63 - 1547 + | chromosomal replication initiator protein TERM 3 1554 - 1536 - f 74 -6 -4.56093 | AACTTAACCAGAAAA TTATCGTC ATA GGCGATAA GGGATTATTATGCAG dnaN 1564 - 2667 + | DNA polymerase III subunit beta TERM 4 2939 - 2906 - f 100 -9.7 -4.90296 | opp_overlap 2906 2909 AAAACGGTATAAAAA TGACCGCTTGTAAAA GCGA TTTTATCAGCGGTCA TTTGTGAATTATTGC TERM 5 2906 - 2939 + F 95 -11.9 -4.02253 | opp_overlap 2906, overlap 2909 AAAACGGTATAAAAA TGACCGCTTGTAAAA GCGA TTTTATCAGCGGTCA TTTGTGAATTATTGC TERM 6 3750 - 3764 + G 75 -7.1 -4.35524 | overlap 3760 CTATACCATGATTGG TCCGC AAAAG GCGGA TTTTCGCTTTCGGGC recF 3001 - 4083 + | recombination protein F TERM 7 4106 - 4088 - T 100 -13.2 -5.68438 | opp_overlap 4088 TGACTAAATAAAAAA GGGATGTG TTA CACATCCC TTTTTTCATCGGTTT TERM 8 4088 - 4106 + T 100 -13.2 -5.19261 | opp_overlap 4088 TGACTAAATAAAAAA GGGATGTG TTA CACATCCC TTTTTTCATCGGTTT sodC 4711 - 4139 - | superoxide dismutase [Cu-Zn] precursor TERM 9 4350 - 4363 + g 76 -8.1 -4.09503 | opp_overlap 4349, overlap 4352 TGTGCGTTATCAGAC CACGG ATAA CCGTG TTGTTTGGTCTCTTT TERM 10 4588 - 4600 + g 77 -6.3 -4.62336 | opp_overlap 4580, overlap 4580 GATCAAGTTGTTGTA CTTGT ACG ACAAG TTTTTCCACTGAGCT TERM 11 5772 - 5752 - g 73 -2.6 -5.22943 | gap 1 ATTAAATTGAAAAAA GATCTACCG TTAG CGG-AAATC GAGCAAATTATTGCG TERM 12 5884 - 5864 - g 71 -8.2 -3.51708 | opp_overlap 5851, overlap 5851 5849 CACCGGCGAAAGTAA CCGGTACG TTAAG CGTTCCGG TCGGTCGTTTACGTA asd 4894 - 6006 + | aspartate-semialdehyde dehydrogenase TERM 13 6031 - 6069 + T 100 -11.1 -4.21438 | opp_overlap 6031 6028 ATTAGAGACTAACAA GCGGTCGGGTTTTGCAA AAAAA TTGCAAATTTTGACCGC TTATTTATTGCAATA TERM 14 6090 - 6108 + T 100 -14.6 -4.67697 | opp_overlap 6090 TATTGCAATAAAAAA GCCCAAGC AAT GCTTGGGC TTTGTTGTTTTCGGA TERM 15 6108 - 6090 - T 100 -14.6 -5.46657 | opp_overlap 6090 TATTGCAATAAAAAA GCCCAAGC AAT GCTTGGGC TTTGTTGTTTTCGGA ompP2A 7264 - 6134 - | outer membrane protein P2 TERM 16 6296 - 6310 + g 86 -5.7 -5.4111 | ATAGTATTCGGTACC CACCA TAAAT TGGTG TTTTTTCTCGTTATT TERM 17 6386 - 6366 - G 78 -10.5 -3.29144 | CTATTGGTTTTATAA GCGTACATA CCG TATGCACGC CAATCATCGGTTAAA TERM 18 7750 - 7740 - g 71 -3.2 -5.06816 | ACCGTTGAAGAAAAA CTCA AAG CGAG CGGAATTAAAACCAT TERM 19 7830 - 7846 + G 71 -2.2 -5.12707 | overlap 7831 7845 AAAATCGCACGGGCA ACCAAC TTAGT GTTGGC TTTTTTACCGTTTGA lpxB 7413 - 8594 + | lipid-A-disaccharide synthase TERM 20 9385 - 9368 - g 82 -4.9 -5.34381 | AAAGGCAAACAAAAA TTCCAAC AAGA ATTGGAA GAAACTCACCAATTA TERM 21 9462 - 9450 - g 100 -9.1 -5.1287 | opp_overlap 9448 TGGATATTGAAAAAA TCGCC ACC GGCGA GCATTGGTTCGGTAA sohB 8624 - 9679 + | putative periplasmic protease TERM 22 9692 - 9736 + F 100 -18.9 -5.89921 | opp_overlap 9695 9714, overlap 9695 TAATCGAGTGTTAAG CAAGCGGTTCGATTTTGTGAA ATT TTTGCAAAATCGAACCGCTTA TTTTTTTGTTATGAT TERM 23 9733 - 9695 - f 100 -16.2 -3.34895 | opp_overlap 9695 9692, overlap 9714 TCGAGTGTTAAGCAA GCGGTTCGATTTTGTGAA ATT TTTGCAAAATCGAACCGC TTATTTTTTTGTTAT TERM 24 9695 - 9733 + F 100 -20.6 -4.98468 | opp_overlap 9695 9714, overlap 9692 TCGAGTGTTAAGCAA GCGGTTCGATTTTGTGAA ATT TTTGCAAAATCGAACCGC TTATTTTTTTGTTAT APL_0009 9914 - 10372 + | cell division protein MraZ mraW 10398 - 11339 + | S-adenosyl-methyltransferase MraW ftsL 11352 - 11666 + | cell division protein FtsL TERM 25 12759 - 12746 - g 70 -8.1 -3.63515 | opp_overlap 12754 GGTTATTGCCAATAA TGCCG AATC CGGCA CGGCGGTGTTGGTTG TERM 26 12799 - 12818 + G 76 -9.2 -3.53012 | CCGGCGAAATTTTGG CGATGGCG AATG CGCCTTCG TTTAACCCGAACAAA TERM 27 13598 - 13616 + G 72 -8 -3.81848 | CGGACAATACTACGG CGGTTCGG TTT CCGCGCCG TTATTCTCGAGTATT ftsI 11670 - 13730 + | peptidoglycan synthetase FtsI murE 13754 - 15256 + | UDP-N-acetylmuramyl-tripeptide synthetase murF 15471 - 16865 + | UDP-MurNAc-pentapeptide synthetase TERM 28 17467 - 17481 + G 73 -3.5 -5.04733 | TCTTTAAAGATGTGA TGCCG CAGCT CGGTA TTTTCTTTATCATTC mraY 16962 - 18044 + | phospho-N-acetylmuramoyl-pentapeptide-transferase TERM 29 18066 - 18050 - f 73 -9.4 -2.90194 | opp_overlap 18050 ACTTCGTTAATCATA GGTGGG CTTGT CCCACC TTTTTCGCTTGCAAG TERM 30 18050 - 18066 + F 100 -9.4 -4.74103 | opp_overlap 18050 ACTTCGTTAATCATA GGTGGG CTTGT CCCACC TTTTTCGCTTGCAAG murD 18128 - 19438 + | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase ftsW 19440 - 20618 + | cell division protein FtsW TERM 31 20628 - 20666 + F 100 -15.4 -4.89063 | opp_overlap 20628 AGTTAAGATCAACAA GCGGTCGGAATTTGCAAA AAA TTTGCAAAAACTGACCGC TTTCTTTTTCCGTAA TERM 32 20666 - 20628 - f 95 -13.2 -3.82486 | opp_overlap 20628 AGTTAAGATCAACAA GCGGTCGGAATTTGCAAA AAA TTTGCAAAAACTGACCGC TTTCTTTTTCCGTAA murG 20773 - 21828 + | N-acetylglucosaminyl transferase murC 21880 - 23307 + | UDP-N-acetylmuramate--L-alanine ligase ddl 23415 - 24326 + | D-alanine--D-alanine ligase ftsQ 24467 - 25120 + | cell division protein FtsQ TERM 33 25426 - 25440 + G 80 -10 -3.60627 | opp_overlap 25426 CTGCGTTGAACGAAA GCGGTA CCG TACCGC TTTCAGGTACGGTAA TERM 34 25440 - 25426 - g 84 -10 -3.90112 | opp_overlap 25426 CTGCGTTGAACGAAA GCGGTA CCG TACCGC TTTCAGGTACGGTAA TERM 35 26278 - 26264 - g 74 -7.8 -3.97674 | opp_overlap 26276 GGATTACGTAAATAA GCCGCA ATA TGCGAC AGTACTCGGTCTTTT ftsA 25146 - 26420 + | cell division protein FtsA TERM 36 26805 - 26819 + G 78 -9.2 -3.64487 | GCGGCGGTACGGGTA CCGGTG CGG CGCCGG TTATTGCCGATATCG ftsZ 26459 - 27670 + | cell division protein FtsZ TERM 37 27788 - 27773 - g 95 -7.6 -5.04385 | CACAGCGGTAAAAAA GTAACG CTAA CGTTAC GTCCCGCACCGGCTA lpxC 27704 - 28624 + | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase TERM 38 28674 - 28649 - f 100 -10.5 -4.12902 | opp_overlap 28649 GAATTAGTTTGAAAA TCCTCGTTGAT GAAA ATCAGCGAGGA TTTTTTTATGGTAAG TERM 39 28649 - 28674 + F 100 -12.7 -5.67063 | opp_overlap 28649 GAATTAGTTTGAAAA TCCTCGTTGAT GAAA ATCAGCGAGGA TTTTTTTATGGTAAG recN 28786 - 30459 + | DNA repair protein RecN TERM 40 30554 - 30496 - T 85 -8.5 -4.17906 | opp_overlap 30497 30497, overlap 30497 AATTAAACGAAATAA GCGGTCGTTTTTTTAG-AGAACAACGCAA TTT TTGCAAAGTTTTCCTAAAAAAACGACCG- CTTGTTGTTATGATT TERM 41 30497 - 30555 + T 82 -8.5 -4.06611 | gap 2, opp_overlap 30496 30497, overlap 30497 ATTAAACGAAATAAG -CGGTCGTTTTTTTA-GAGAACAACGCAA TTT TTGCAAAGTTTTCCTAAAAAAACGACCGC TTGTTGTTATGATTC TERM 42 30554 - 30497 - T 95 -14.5 -3.09117 | gap 1, opp_overlap 30497 30497, overlap 30496 ATTAAACGAAATAAG CGGTCGTTTTTTTAG-AGAACAACGCAA TTT TTGCAAAGTTTTCCTAAAAAAACGACCG CTTGTTGTTATGATT TERM 43 30497 - 30554 + T 95 -14.5 -3.02882 | gap 1, opp_overlap 30496 30497, overlap 30497 ATTAAACGAAATAAG CGGTCGTTTTTTTA-GAGAACAACGCAA TTT TTGCAAAGTTTTCCTAAAAAAACGACCG CTTGTTGTTATGATT APL_0026 32004 - 30601 - | ABC transporter ATP-binding protein TERM 44 31692 - 31682 - G 71 -4 -4.78029 | opp_overlap 31682 GCAACAAAAGTAAAA CTTT CCC AAAG CTGTTTACCTATCGT APL_0027 32789 - 32004 - | nickel transport system permease protein APL_0028 33739 - 32792 - | ABC transporter permease protein TERM 45 33807 - 33770 - R 89 -7 -5.38951 | opp_overlap 33770 AATTCATATAAAAAA CACGGAAAGCGGCTTA AATTTG TATGCTGTTTTCCGTG TTTTTAATGCTAAAT TERM 46 33770 - 33807 + r 100 -11.4 -4.77438 | opp_overlap 33770 AATTCATATAAAAAA CACGGAAAGCGGCTTA AATTTG TATGCTGTTTTCCGTG TTTTTAATGCTAAAT APL_0029 35407 - 33833 - | ABC transporter periplasmic protein TERM 47 35495 - 35476 - R 83 -2.2 -5.77632 | AAAACCATAAAAAAA TAATAGCT ATTA ATCTATTA AATCAATAAAAAAAT TERM 48 35593 - 35543 - R 100 -19.4 -2.90904 | opp_overlap 35550, overlap 35550 GGAGAATTAGAAGGA TAAAAAAGCGGTCATTTTGTCGAA TTT CTCTACAAAATGACCGCTTGTTTA GCAAAGATTAATGTT TERM 49 35550 - 35586 + r 100 -16.8 -3.90922 | opp_overlap 35543 35550 TAGAAGGATAAAAAA GCGGTCATTTTGTCGA ATTTC TCTACAAAATGACCGC TTGTTTAGCAAAGAT TERM 50 35586 - 35550 - R 100 -17.5 -5.39755 | opp_overlap 35550, overlap 35543 TAGAAGGATAAAAAA GCGGTCATTTTGTCGAA TTT CTCTACAAAATGACCGC TTGTTTAGCAAAGAT prfC 37181 - 35601 - | peptide chain release factor 3 TERM 51 37020 - 37043 + g 70 -5.2 -4.56914 | CATTTCCATCCAGTC GGATTTGGCG TGTG CGCTAGAGCC TTTTCCTTTCACTGA APL_0031 37364 - 37831 + | integral membrane protein TERM 52 38246 - 38256 + G 71 -6.8 -4.08216 | GGAGTATGCGCTTTA CGGT TCA ACCG TTTTCGGCGGCATCG yhaH 37878 - 38393 + | hypothetical protein TERM 53 38436 - 38405 - f 86 -10.2 -3.56862 | opp_overlap 38408, overlap 38395 38408 ATAAATTCGGCGAAA TCAGGGCATTTTCC TTGT GGAAAATGCCCTTT TTGCCTACAATAATA TERM 54 38433 - 38408 - f 100 -16.3 -2.90992 | opp_overlap 38408, overlap 38405 38395 AATTCGGCGAAATCA GGGCATTTTCC TTGT GGAAAATGCCC TTTTTGCCTACAATA TERM 55 38408 - 38433 + F 100 -16.3 -4.66609 | opp_overlap 38408 38405 38395 AATTCGGCGAAATCA GGGCATTTTCC TTGT GGAAAATGCCC TTTTTGCCTACAATA pth 38520 - 39104 + | peptidyl-tRNA hydrolase TERM 56 39137 - 39153 + F 84 -6.5 -5.07107 | opp_overlap 39137 39136 CAGAATTATGATAAG CGGTCAA ATT TAGACCG TTTTTTACCAATTTA TERM 57 39514 - 39502 - g 70 -7.7 -3.57615 | CCAATATTCGTGAAA CCGAT GCG ATCGG TCACGTAGTGCGTTG TERM 58 39737 - 39753 + G 73 -8.7 -3.54408 | GGTGCTTGAAAATGC CGGAATG ATT CGTTCCG TTGATTTAGATAAAG engD 39213 - 40304 + | translation-associated GTPase TERM 59 40326 - 40355 + F 100 -9.4 -5.00884 | opp_overlap 40325 AAAATAACCGAAATT TGACCGCTTGTG AAAGAG TACAAGCGGTTA TTTTTTAGGAGAAAT TERM 60 40558 - 40545 - g 78 -5.9 -4.78848 | opp_overlap 40525 TTTTTAAAGAGAAAA CGGCA TTTA CGCCG AGAGATCCGACTCAA TERM 61 40595 - 40583 - g 80 -6.3 -4.7923 | opp_overlap 40583 40582 ACTCAAACAAATAAA CTTGT GGT ACAAG GTATTTATCGCGTAA APL_0035 40376 - 40813 + | putative protein-S-isoprenylcysteine methyltransferase TERM 62 40823 - 40848 + T 74 -9.1 -3.00704 | opp_overlap 40828, overlap 40828 CTGTGAGAAAGATAA AAAAACCTCGA TTGC TCGAGGTTTTA TATAATTTCAACCGT TERM 63 40843 - 40828 - T 100 -9 -5.90231 | opp_overlap 40828 40823 AGAAAGATAAAAAAA CCTCGA TTGC TCGAGG TTTTATATAATTTCA TERM 64 40828 - 40843 + T 89 -9 -4.6468 | opp_overlap 40828, overlap 40823 AGAAAGATAAAAAAA CCTCGA TTGC TCGAGG TTTTATATAATTTCA APL_0036 41138 - 40863 - | hypothetical protein slyB 41633 - 41169 - | outer membrane lipoprotein APL_0038 42256 - 41660 - | hypothetical protein TERM 65 42570 - 42560 - g 73 -8.2 -3.72588 | opp_overlap 42559 TAACGCAGATTTAAA CGGC ATT GCCG ATAAATTAGAAATTG argS 42435 - 44081 + | arginyl-tRNA synthetase TERM 66 44666 - 44649 - g 70 -2.5 -5.00616 | overlap 44629 CGCCTCGTCAAAAAA CGAACGG TACA CCGGGCG AAAAACGTGATTTAT obgE 44225 - 45400 + | GTPase ObgE TERM 67 45454 - 45417 - f 89 -10.7 -3.52652 | opp_overlap 45417 CCTAGCTAATGACAA GCGGTTGAATTTGCGAA AAAA TTTACAAATTCGACCGC TTTTTATTTGAGGAA TERM 68 45417 - 45454 + F 100 -12.9 -5.27335 | opp_overlap 45417 CCTAGCTAATGACAA GCGGTTGAATTTGCGAA AAAA TTTACAAATTCGACCGC TTTTTATTTGAGGAA APL_0041 45475 - 46086 + | hypothetical protein rlmB 46929 - 46186 - | 23S rRNA (guanosine-2'-O-)-methyltransferase TERM 69 46993 - 46954 - R 93 -8 -5.63517 | overlap 46956 TTTGTAAATAAAAAA GACGGATAACAAAGTTTT ATAC AAATCTATGTTATCCGTG ATAAATCAAATAATT TERM 70 46991 - 46956 - R 100 -10.6 -4.45696 | overlap 46954 TGTAAATAAAAAAGA CGGATAACAAAGTTTT ATAC AAATCTATGTTATCCG TGATAAATCAAATAA pssA 48372 - 47008 - | phosphatidylserine synthase TERM 71 47411 - 47401 - G 73 -8.2 -3.61232 | opp_overlap 47410, overlap 47399 47402 TTTCTCATATAAATA CGGC AAT GCCG ATGCCATCGTAAATT TERM 72 47474 - 47450 - G 74 -4.9 -4.82901 | opp_overlap 47450, overlap 47452 GGCGGCGTATAAAAA TCGTTGGCGGT TTT ATCGCCGACAA TAATTTCCGCTTTTT TERM 73 48481 - 48509 + r 72 -8.1 -3.35088 | opp_overlap 48471 48486, overlap 48486 AATAACTTTGTAATG TAAAACCTCGCAC ATT GTGCGAGGTTACG TTACTTAAGCAATTT TERM 74 48504 - 48486 - R 100 -14.6 -4.27316 | opp_overlap 48481 48486, overlap 48471 CTTTGTAATGTAAAA CCTCGCAC ATT GTGCGAGG TTACGTTACTTAAGC TERM 75 48486 - 48504 + r 95 -14.6 -3.23899 | opp_overlap 48486 48471, overlap 48481 CTTTGTAATGTAAAA CCTCGCAC ATT GTGCGAGG TTACGTTACTTAAGC ileS 51340 - 48524 - | isoleucyl-tRNA synthetase TERM 76 50717 - 50735 + g 74 -9.6 -3.33214 | opp_overlap 50715 50713 50717, overlap 50715 GCGAACATAAATAGA CGGAGACA CTT TGTCTTCG TATTCTACTTCCGCT TERM 77 51311 - 51299 - G 78 -9.1 -3.84825 | opp_overlap 51292 51297 CCCACGCATAGGAAA GCCTG TTT CAGGC AAATTTAAAGTGTTT ribF 52363 - 51401 - | riboflavin biosynthesis protein TERM 78 51709 - 51726 + g 71 -9.1 -3.30338 | TTAGCATAATATTTG CGGTCGG AAAA CCGATCG TTCTCCCGAGCTTAT TERM 79 51959 - 51930 - G 75 -7.1 -4.36127 | overlap 51923 51933 CGTAACAAGGCAAAA TCACCGGTTCGGT TTGC ACCGAAGCGGAAA TCGTCGCCTACGCTT TERM 80 51956 - 51933 - G 79 -11 -3.15579 | overlap 51930 51923 AACAAGGCAAAATCA CCGGTTCGGT TTGC ACCGAAGCGG AAATCGTCGCCTACG nadR 52696 - 53976 + | nicotinamide-nucleotide adenylyltransferase TERM 81 54216 - 54202 - g 76 -7.8 -4.15006 | overlap 54190 ATAGCGAGTGGAAAA CGCGCA GTT TGCACG GCAAAGTCGTAGATA APL_0047 53973 - 54671 + | diadenosine tetraphosphatase TERM 82 55240 - 55226 - g 73 -3.5 -5.00027 | ATGAAAAAGAGAAAA CGACG AAAGA CATCG TACAGACGGACAGCT arcA 54844 - 55560 + | two-component response regulator APL_0049 55612 - 56130 + | hypothetical protein TERM 83 56148 - 56192 + T 100 -13.7 -5.44721 | opp_overlap 56151, overlap 56151 ATTTTTCCCTTATGA CAAGCGGTCGTTTCTTGCAAA AAA TTTGCGAACAACGACCGCTTA TTTTTTTGGCATAGT TERM 84 56189 - 56151 - T 100 -15.4 -3.40403 | opp_overlap 56148 56151 TTTCCCTTATGACAA GCGGTCGTTTCTTGCAAA AAA TTTGCGAACAACGACCGC TTATTTTTTTGGCAT TERM 85 56151 - 56189 + T 100 -15.4 -4.80853 | opp_overlap 56151, overlap 56148 TTTCCCTTATGACAA GCGGTCGTTTCTTGCAAA AAA TTTGCGAACAACGACCGC TTATTTTTTTGGCAT APL_0050 57073 - 56285 - | hypothetical protein TERM 86 56972 - 56984 + g 70 -5.5 -4.45485 | opp_overlap 56972, overlap 56961 AGGGGCTTTTAAGAA GGCTT TAG GAGCC TTTTCTAAATATCGT TERM 87 57261 - 57223 - R 100 -12.6 -4.64766 | opp_overlap 57224, overlap 57224 TTCATATTTCAAAAA GGTAGGTTAAAGCCTTGT ACT ATAAGGCTTTAACCCACT TTTTACCAACCTTTT TERM 88 57260 - 57224 - R 100 -16.1 -3.38378 | opp_overlap 57224, overlap 57223 TCATATTTCAAAAAG GTAGGTTAAAGCCTTGT ACT ATAAGGCTTTAACCCAC TTTTTACCAACCTTT TERM 89 57224 - 57260 + r 100 -16.1 -4.58685 | opp_overlap 57223 57224 TCATATTTCAAAAAG GTAGGTTAAAGCCTTGT ACT ATAAGGCTTTAACCCAC TTTTTACCAACCTTT APL_0051 57847 - 57311 - | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase TERM 90 58241 - 58209 - g 100 -9.3 -4.58395 | gap 1 TTGATCGTTTAAAAA TTGCCGAACGCTTG AGTGCG CAA-CGCTCGGCAA ATAAAGCACCGCTCA TERM 91 58429 - 58419 - g 71 -2.4 -5.1861 | overlap 58420 58421 CGGAGCAGCAAAAAA TCGC ATT GCGT AAAATGCAGCAACTT APL_0052 57902 - 58597 + | hypothetical protein typA 58930 - 60636 + | GTP-binding protein TERM 92 60658 - 60685 + F 100 -8.5 -5.82388 | gap 1, opp_overlap 60657 60658 TTAGTTTAATGAAAT GCTCGC-TGCTA TTACC TAGCAAGCGGGC TTTTTTTTAGGGTTT grxA 60795 - 61058 + | glutaredoxin 1 TERM 93 61082 - 61116 + T 70 -3.7 -4.96501 | gap 1, opp_overlap 61082 CGTTAGAAACAAAAA CGGCACAAGT-ATTTA ATTT TAATTTACTTATGCCG TTTATTTTTATAAAG TERM 94 61116 - 61082 - T 84 -5.9 -5.38054 | gap 1, opp_overlap 61082 CGTTAGAAACAAAAA CGGCACAAGT-ATTTA ATTT TAATTTACTTATGCCG TTTATTTTTATAAAG rph 61840 - 61124 - | ribonuclease PH TERM 95 61770 - 61759 - G 73 -5.8 -4.45664 | CGAATTCAACTAAAA CGGA ACCT TCCG CATAACGAGTATAGT TERM 96 62421 - 62407 - g 70 -7.2 -3.82202 | GATGCTCAAACACAA GATTTG GAT CAAATC GGGCAAGACCTGTTA TERM 97 62588 - 62573 - g 70 -7.6 -3.5936 | CGCAAATGCCGGAAA TTCTGC AATG GCAGAA AGATAAATTACAACA yicC 62044 - 62907 + | hypothetical protein APL_0057 62916 - 63803 + | hypothetical protein TERM 98 63834 - 63811 - T 100 -14 -5.56673 | opp_overlap 63811 ACGCATAACAAAAAA CGGAGAATGA AGGT TCATTCTCCG TTTTTTTACGTTTTA TERM 99 63811 - 63834 + T 100 -14 -5.61824 | opp_overlap 63811 ACGCATAACAAAAAA CGGAGAATGA AGGT TCATTCTCCG TTTTTTTACGTTTTA yfhL 64113 - 63853 - | putative ferredoxin TERM 100 64253 - 64208 - R 87 -11.4 -3.3344 | opp_overlap 64212, overlap 64212 AGTTAAGCGGTACAA GTAAGCGGTTAAATTTGCCA CTTTTT TAGTAAATTTAACCGCTTGC TGGGATTAACCCTTT TERM 101 64212 - 64249 + r 86 -10.8 -3.18681 | opp_overlap 64208 64212 AAGCGGTACAAGTAA GCGGTTAAATTTGCCA CTTTTT TAGTAAATTTAACCGC TTGCTGGGATTAACC TERM 102 64249 - 64212 - R 87 -10.8 -3.4489 | opp_overlap 64212, overlap 64208 AAGCGGTACAAGTAA GCGGTTAAATTTGCCA CTTTTT TAGTAAATTTAACCGC TTGCTGGGATTAACC narP 64888 - 64259 - | nitrate/nitrite response regulator protein TERM 103 64961 - 64945 - H 72 -9.5 -2.73701 | opp_overlap 64948, overlap 64944 TCTCACTAAAGCAAG TTACCCA TTT TGGGTAA TTCAACTAATTTTTG TERM 104 65934 - 65922 - g 71 -4.8 -4.69622 | ACAGAATGCGAAAAA TGCC GGTGT GGCA CATTTAATTCAATGG TERM 105 66488 - 66462 - g 81 -7.3 -4.65895 | TGCCGCACCGAAAAA CATTGACGAAC AAAAA GCTCGCCAACG CTTACTAGATGCCGT APL_0060 65092 - 67230 + | 23S rRNA m(2)G2445 methyltransferase TERM 106 67266 - 67237 - f 71 -8.7 -3.0274 | opp_overlap 67244, overlap 67242 GAAAATTAACAATCA CGAAATACACGAA AAGT TTTGTGTATTCCG CCTATTGGATGGTAA yibK 67288 - 67767 + | putative tRNA/rRNA methyltransferase TERM 107 67883 - 67864 - T 100 -12.2 -5.67967 | opp_overlap 67864 AGTAGCATAAAAAAA TCCCAAGC CTCA GCTTGGGA TTTTTGTTTCAATAA TERM 108 67864 - 67883 + T 100 -12.2 -5.30616 | opp_overlap 67864 AGTAGCATAAAAAAA TCCCAAGC CTCA GCTTGGGA TTTTTGTTTCAATAA mipB 68854 - 67907 - | transaldolase B TERM 109 69114 - 69159 + H 80 -2.6 -5.72254 | gap 1, overlap 69117 ATAATGCATCCCACA CAACGACGCACTGTTGTGAAC GAGAA GTAAATG-CAGTGCGTCGTTC TTTTTTGTTCTTTAA TERM 110 69117 - 69156 + H 73 -4.3 -4.86954 | gap 1, overlap 69114 ATGCATCCCACACAA CGACGCACTGTTGTGAAC GAGAA GTAAATG-CAGTGCGTCG TTCTTTTTTGTTCTT TERM 111 70862 - 70879 + H 74 -9.1 -3.07291 | opp_overlap 70862 GTCGTAACAAGGTAA CCGTAGG GGAA CCTGCGG TTGGATCACCTCCTT TERM 112 70967 - 70955 - H 82 -7.7 -4.52347 | GAAAGAAGACGAAAA CGGAT ATA ATCCG GCATCCTTTTGGGTC TERM 113 71945 - 71933 - H 72 -6.2 -4.31549 | GAAAAGCGAAAAGAA CCCC GGTGA GGGG AGTGAAATAGAACCT TERM 114 72740 - 72726 - H 71 -5.7 -4.58213 | TAAGTAACGATAAAA CGAGT GAAAA ACTCG TTCGCCGGAAGACCA TERM 115 74444 - 74418 - H 74 -2.2 -5.57729 | AAAGAAGACAAAAAA CGAAAAAATCAG TGA CGGCTTGTTTCG AATTTAAGAAGAAAA TERM 116 74652 - 74677 + H 100 -10.5 -5.25735 | opp_overlap 74652 GAGAGGCGAAGGGAA CCCTGTGGTTA GCGA TAACTACGGGG TTTTTGCTTTTTTAC TERM 117 76059 - 76034 - g 72 -7.7 -3.86944 | overlap 76035 GCTATAACGATGAAA TTCAGGATTAT GAAT ATAATCCTGAG AAAGCGAAAGCATTA TERM 118 76058 - 76035 - g 79 -11.2 -2.91684 | overlap 76034 CTATAACGATGAAAT TCAGGATTAT GAAT ATAATCCTGA GAAAGCGAAAGCATT dppA 75007 - 76602 + | periplasmic dipeptide transport protein TERM 119 76625 - 76674 + F 100 -15.3 -4.72272 | opp_overlap 76625 TAGTAAATATGATAA GCGGTCTAGATTTTGCGGAAATT TGCA AATTTTCGTTGAATTTAGACCGC TTTTTACTGAAAAAG dppA 76770 - 78371 + | periplasmic dipeptide transport protein dppB 78499 - 79503 + | dipeptide transport system permease protein DppB TERM 120 80391 - 80403 + G 70 -7.7 -3.7014 | overlap 80354 80401 ACCATTCCGGGGCTT GCGAT TTT ATCGC TTGTATTAGCGTTTA dppC 79581 - 80471 + | dipeptide transport system permease protein DppC dppD 80482 - 81468 + | dipeptide transporter ATP-binding subunit TERM 121 81528 - 81510 - g 73 -3.8 -4.95211 | overlap 81505 AAAAAACGAACAAAA CGCACC GCTTCTT GATGCG AAAAAGCTGAAAAAA dppF 81481 - 82470 + | dipeptide transporter ATP-binding subunit TERM 122 82487 - 82531 + T 100 -18.1 -5.95946 | opp_overlap 82490 TAGTCTTAAGATAGC CAAGCGGTCGTTTCTTGCAAA AAA TTTGCGAAAAACAACCGCTTG TTTTTTTATTATTAG TERM 123 82528 - 82490 - T 100 -16.2 -3.19175 | opp_overlap 82487 TCTTAAGATAGCCAA GCGGTCGTTTCTTGCAAA AAA TTTGCGAAAAACAACCGC TTGTTTTTTTATTAT psiE 82953 - 82543 - | phosphate-starvation-inducible protein PsiE APL_0070 83663 - 83031 - | hypothetical protein APL_0071 84062 - 83718 - | hypothetical protein TERM 124 84132 - 84088 - R 100 -16 -4.87133 | opp_overlap 84091 84100 ATGTTTGAAAGAAAA CAAGCGGTAGAAATTTGCAA AAAAA TTGCAAAATTTTACCGCTTG CATAGCTTAAATCGG TERM 125 84091 - 84129 + r 93 -14.1 -3.10112 | opp_overlap 84088, overlap 84100 TTTGAAAGAAAACAA GCGGTAGAAATTTGCAA AAAAA TTGCAAAATTTTACCGC TTGCATAGCTTAAAT ilvE 85186 - 84149 - | branched-chain amino acid aminotransferase TERM 126 84573 - 84592 + g 70 -9.3 -2.78547 | opp_overlap 84564 84567, overlap 84556 84564 84571 GCAAATTTACGGGTT GCCGTAC CTTGTT GTACGGC TAATTCGTGCGGTAA TERM 127 84900 - 84934 + g 72 -9.3 -3.1319 | gap 1 ACAAATAATTCGGTC GGCACTTC-CGCCATT AATA AACGGCGAGCAGTGCC TTGCATACGTTTTGC TERM 128 85310 - 85290 - R 100 -12.6 -5.60993 | opp_overlap 85287 85286, overlap 85269 85268 TTTTCGATAAAAAAA GCCCAAGC GAATT GCTTGGGC TAACTGTTTGTAAAA ydhD 85655 - 85329 - | monothiol glutaredoxin-like protein recR 86392 - 85727 - | recombination protein RecR TERM 129 86394 - 86360 - G 75 -8.8 -3.68767 | gap 1, opp_overlap 86363, overlap 86363 ATAGTTGAAAATTAA TAATGGATAG-CCGC AATAAA GCGAACTATCCATTA TCGCTAAATTAGAAT ybaB 86732 - 86403 - | uncharacterized protein YbaB TERM 130 86790 - 86806 + r 79 -8 -4.03183 | TTTTACTTAAGCACT CCGCTT TAGGC AAGCGG TTATCTTTTGTCGAT TERM 131 86890 - 86869 - R 100 -13.1 -4.8622 | opp_overlap 86872 TGGCTTAAGTAAAAA TAAGCTCCC TTAC GGGAGCTTA TTGACAAGATTTATT TERM 132 86872 - 86887 + r 86 -10.4 -3.6279 | opp_overlap 86869 CTTAAGTAAAAATAA GCTCCC TTAC GGGAGC TTATTGACAAGATTT tonB2 87767 - 86901 - | protein TonB2 TERM 133 87553 - 87582 + g 80 -10.5 -3.4811 | overlap 87554 87566 TCGACTTCGACTTTC TCCGGCTCCGGCG GCTC CGGCGGTGCCGGC TCTTCTTGTGCGACG TERM 134 87554 - 87581 + g 95 -14 -2.68545 | overlap 87553 87566 CGACTTCGACTTTCT CCGGCTCCGGCG GCTC CGGCGGTGCCGG CTCTTCTTGTGCGAC exbD2 88166 - 87777 - | biopolymer transport protein ExbD2 exbB2 88663 - 88211 - | biopolymer transport protein ExbB2 glpE 88851 - 89177 + | thiosulfate sulfurtransferase GlpE APL_0080 89221 - 90066 + | putative thioredoxin-like protein TERM 135 90087 - 90112 + T 93 -7.6 -5.4833 | opp_overlap 90087 TTTGAAGCAAAAAAA TGAGGCGAAA GTATTA TTCCGCCTCA TTTTTTATTGGGTAA TERM 136 90112 - 90087 - T 100 -9.8 -5.63103 | opp_overlap 90087 TTTGAAGCAAAAAAA TGAGGCGAAA GTATTA TTCCGCCTCA TTTTTTATTGGGTAA dhaM 90548 - 90141 - | PTS-dependent dihydroxyacetone kinase, phosphotransferase subunit DhaM dhaL 91183 - 90557 - | dihydroxyacetone kinase ADP-binding subunit dhaK 92255 - 91185 - | dihydroxyacetone kinase subunit DhaK trxB 92425 - 93378 + | thioredoxin reductase TERM 137 93453 - 93463 + F 71 -6.8 -4.25873 | opp_overlap 93452 CCATGTTGATTTAAG CGGA TGT TCCG TGTTTTTTATAAAGG kdsB 93486 - 94238 + | 3-deoxy-manno-octulosonate cytidylyltransferase TERM 138 94294 - 94251 - f 95 -12.6 -3.56099 | opp_overlap 94250 94254, overlap 94254 94264 TAGAATCGGCGGAAA CAAGCGGTCAAAATTGCAAA AAAC TTTGCAAATCAGACCGCTTA ATTATCTAGGCTGAG TERM 139 94291 - 94254 - f 95 -12.1 -3.91488 | opp_overlap 94250 94254, overlap 94251 94264 AATCGGCGGAAACAA GCGGTCAAAATTGCAAA AAAC TTTGCAAATCAGACCGC TTAATTATCTAGGCT TERM 140 94254 - 94291 + F 81 -9.9 -3.49886 | opp_overlap 94254 94251 94264, overlap 94250 AATCGGCGGAAACAA GCGGTCAAAATTGCAAA AAAC TTTGCAAATCAGACCGC TTAATTATCTAGGCT TERM 141 94281 - 94264 - f 75 -7.1 -4.12599 | opp_overlap 94254 94250, overlap 94254 94251 AACAAGCGGTCAAAA TTGCAAA AAAC TTTGCAA ATCAGACCGCTTAAT TERM 142 94344 - 94331 - f 79 -4.5 -5.33405 | opp_overlap 94331 94332, overlap 94332 CTCAGTAAATAAAAA CGTGC TTAG GCACA TTTCTCGGAGTAAAC TERM 143 94571 - 94553 - g 86 -8 -4.71426 | overlap 94555 94557 TGCGGATGAAGAAAA CGCACCGG TAT CCGGCGAG CAAATCGCAAATGTA APL_0086 94362 - 94787 + | hypothetical protein TERM 144 94821 - 94799 - T 100 -15 -4.21933 | opp_overlap 94799 CTAATCTTAAAACAA CAGGGAGAAT TTA ATTCTCCCTG TTTTTGTTTAGGCTT TERM 145 94799 - 94821 + T 100 -15 -5.29846 | opp_overlap 94799 CTAATCTTAAAACAA CAGGGAGAAT TTA ATTCTCCCTG TTTTTGTTTAGGCTT nudC 95631 - 94861 - | NADH pyrophosphatase rluE 96344 - 95649 - | ribosomal large subunit pseudouridine synthase E TERM 146 95839 - 95860 + g 73 -3.7 -4.93365 | overlap 95840 95843 TCGTGGATTTTTAGC TCAATCCAA CTAG TTGGAATGG TTTTTCGTTCTCGAA TERM 147 95929 - 95948 + g 72 -7.8 -3.75153 | overlap 95931 ATCGCTTTCGCTTTT GCCGGCTT GGTT AAGCCGTC TTTCAATTCAACACC TERM 148 95931 - 95946 + g 73 -9 -3.46068 | overlap 95929 CGCTTTCGCTTTTGC CGGCTT GGTT AAGCCG TCTTTCAATTCAACA TERM 149 95997 - 95983 - G 80 -10 -3.68619 | opp_overlap 95982 TCTAACTTAGCTAAA TCCGCA GCT TGCGGA ATACCTTCCACCTGT TERM 150 96294 - 96311 + g 76 -2.7 -5.25976 | TTGCAAGTTCGGTTT GTTTGTT GCGG AACGAGC TTTATTTTTTTGATT rhaT 97166 - 96348 - | hypothetical protein APL_0090 97660 - 97196 - | hypothetical protein TERM 151 97690 - 97715 + r 70 -4.1 -4.75776 | gap 1, opp_overlap 97690 97698, overlap 97691 TGAATGCTTTAATGA TCGGAAAGTTGA AGT TCAA-TTTCCGC TTTTTGGGTTAAATT pepQ 99014 - 97683 - | proline dipeptidase sirA 99038 - 99277 + | sulfurtransferase TERM 152 99322 - 99284 - T 95 -13.5 -3.50853 | gap 1, opp_overlap 99292, overlap 99289 99292 GGGCTTTAAGCACAA TAAAATAATCCCCCACAC AAAT GTATGGGGGATT-TTTTA ACTATTAGTGACGTG TERM 153 99318 - 99289 - T 100 -11.5 -4.84492 | opp_overlap 99292, overlap 99284 99292 TTAAGCACAATAAAA TAATCCCCCACAC AAAT GTATGGGGGATTT TTTAACTATTAGTGA TERM 154 99315 - 99292 - T 100 -13.2 -4.5028 | opp_overlap 99292, overlap 99289 99284 AGCACAATAAAATAA TCCCCCACAC AAAT GTATGGGGGA TTTTTTAACTATTAG TERM 155 99292 - 99315 + T 100 -11 -5.1615 | opp_overlap 99292 99289 99284 AGCACAATAAAATAA TCCCCCACAC AAAT GTATGGGGGA TTTTTTAACTATTAG APL_0093 99767 - 99327 - | hypothetical protein engB 100389 - 99769 - | GTPase EngB TERM 156 99980 - 99996 + g 70 -7.9 -3.6018 | AATAATACCGGTAAT TGTGCGG ATA CCGCCCA TTCTATCATCTGTTG APL_0095 101100 - 100684 - | hypothetical protein APL_0096 101968 - 101138 - | zinc transporter family protein ZIP TERM 157 101721 - 101700 - G 87 -5 -5.45652 | overlap 101701 101702 101715 ATTCGCAAGAAAAAA CCGCCGGC AAGGAA GCCGACCG CAGCCGGTAGCCATG TERM 158 102031 - 102048 + r 78 -7.1 -4.37658 | opp_overlap 102011 AATTTGCTCGAATTT TTGCAAA TTAT TTTGCAA TTTTCTAGCGAAATT ilvD 103954 - 102119 - | dihydroxy-acid dehydratase ilvM 104290 - 104072 - | acetolactate synthase 2 regulatory subunit ilvG 105810 - 104311 - | acetolactate synthase isozyme II large subunit (AHAS-II) TERM 159 104947 - 104958 + g 70 -5.8 -4.28254 | opp_overlap 104946 TTGGAAATCCAAATC CGCT TTTA AGCG TTTTACGTCTTCACG TERM 160 105514 - 105524 + g 73 -8.2 -3.5936 | CACTAATACCGGACC GGGG CGA CCCC TTTGCGCGATTTGGA TERM 161 106407 - 106383 - H 88 -7.1 -4.86621 | opp_overlap 106385, overlap 106387 ACGTTTAACTAAAAA CCTAGCAATGG CAA CCATTGCAATG TTGGGATGTTTATCA TERM 162 106403 - 106387 - H 81 -10.9 -2.88788 | opp_overlap 106385, overlap 106383 TTAACTAAAAACCTA GCAATGG CAA CCATTGC AATGTTGGGATGTTT nrfA 106390 - 107871 + | cytochrome c nitrite reductase TERM 163 107934 - 107913 - g 88 -10.1 -4.16681 | opp_overlap 107922 107927, overlap 107916 AACATTATCTCAAAA GCAGGGCGA GCAA TCGCCCTCC AAGCGGTCGCTTTTG TERM 164 107931 - 107916 - g 77 -10.4 -3.10098 | opp_overlap 107922 107927, overlap 107913 ATTATCTCAAAAGCA GGGCGA GCAA TCGCCC TCCAAGCGGTCGCTT TERM 165 107947 - 107964 + G 71 -8.5 -3.54424 | TCCAAGCGGTCGCTT TTGCAAG TTTT CTTGCAA TTTCAACCGCTAGCC nrfB 107892 - 108539 + | cytochrome c-type protein NrfB TERM 166 108663 - 108651 - g 88 -3.3 -5.86465 | overlap 108652 AAGAAGAGAAAAAAA TTCGC TAT GCGAT GGTGCACGATGAAAC TERM 167 108662 - 108652 - g 71 -6.8 -4.08219 | overlap 108651 AGAAGAGAAAAAAAT TCGC TAT GCGA TGGTGCACGATGAAA TERM 168 108954 - 108966 + G 82 -7.7 -4.42386 | overlap 108952 GTATCGCAGTTTGCC CGTAC CGT GTACG TTTTATCCATCCGGA nrfC 108539 - 109216 + | nitrate reductase TERM 169 109370 - 109359 - g 71 -2.2 -5.15117 | overlap 109361 109362 CAAAATTGCAAAAAA CAGC GATA ACTG GGTTATCCGTAGTGC nrfD 109216 - 110184 + | nitrite reductase transmembrane protein TERM 170 110419 - 110445 + F 83 -7.5 -4.68446 | overlap 110428 AGCAATATATCTTAT TATAGATACTA GTATA TAGTGTCTATA TTTTATCTGATTTTT TERM 171 112188 - 112177 - g 71 -4.4 -4.84527 | CGGATACAGTAAAAA CAAC CGGT GTTG ATAATGACGGAATTC TERM 172 115099 - 115089 - g 74 -6.8 -4.32048 | opp_overlap 115089 115087, overlap 115090 CAAGAACAGTTAAAA TCCG TTT CGGA TGTTGTGCAAAACGG TERM 173 116400 - 116385 - g 76 -2.6 -5.28176 | gap 1, overlap 116374 GTTATTCAGAAAAAA CTGAACG AAA CGTT-AG CGATTAAAGGCAACT APL_0104 110472 - 119936 + | autotransporter adhesin TERM 174 119952 - 119987 + T 78 -10.6 -2.69799 | opp_overlap 119960, overlap 119960 TAACCTATAATTGAA TGAATAAATGCGACCT TTCG GGGTCGCATTTTTTTA TGATATGTAACCTAA TERM 175 119979 - 119960 - T 93 -9.3 -4.34223 | opp_overlap 119960 119952 AATTGAATGAATAAA TGCGACC TTTCGG GGTCGCA TTTTTTTATGATATG TERM 176 119960 - 119979 + T 100 -10 -5.69473 | opp_overlap 119960, overlap 119952 AATTGAATGAATAAA TGCGACCT TTCG GGGTCGCA TTTTTTTATGATATG TERM 177 120094 - 120150 + T 100 -13.4 -4.19746 | opp_overlap 120094, overlap 120115 GAATATTTAAAAAAA GCGGTCGAATTTC-CTAAATCTTTTGCA ATT TGCAAGTT-TTTAGTGAAATTCGACCGC TTGTTTTAGAATAGA TERM 178 120150 - 120094 - T 100 -11.2 -5.52909 | opp_overlap 120094 120115 GAATATTTAAAAAAA GCGGTCGAATTTC-CTAAATCTTTTGCA ATT TGCAAGTT-TTTAGTGAAATTCGACCGC TTGTTTTAGAATAGA TERM 179 120115 - 120129 + T 72 -5 -4.74801 | opp_overlap 120094, overlap 120094 GAATTTCCTAAATCT TTTGCA ATT TGCAAG TTTTTAGTGAAATTC uraA 121406 - 120177 - | putative uracil permease TERM 180 120635 - 120611 - G 72 -9.4 -3.20382 | gap 1 CGGCAGACGTAGCAA CACCGTCACCT AATA AGGT-ACGGTG TAAACCCGGTTTCGT TERM 181 121538 - 121514 - R 93 -7.9 -5.60556 | AACAGAAAATAAAAA TCCCCTCAG TTTATTG CTAAGGGGA TACATATTAAGCATG putA 125171 - 121566 - | bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase TERM 182 123660 - 123674 + g 70 -5.6 -4.2558 | opp_overlap 123670 CGGGTGCATGGTGCC GGCGGT AAT ACCGGC TTTTGCTACCGGATC TERM 183 124834 - 124846 + g 100 -9.1 -4.82128 | overlap 124823 ATATGTGATTTCCAG TCGCC TTT GGCGA TTTTGTCTTTAATCA TERM 184 125241 - 125266 + r 100 -13.3 -4.46072 | opp_overlap 125241 TTCGAAAACAAAAAA GCGACTTGCCG TTGC CGGCAAATCGC TTTGTCTTTATTGAA TERM 185 125266 - 125241 - R 100 -15.5 -5.79595 | opp_overlap 125241 TTCGAAAACAAAAAA GCGACTTGCCG TTGC CGGCAAATCGC TTTGTCTTTATTGAA putP 126788 - 125274 - | sodium/proline symporter iclR 128148 - 127363 - | putative HTH-type transcriptional regulator TERM 186 127671 - 127686 + g 80 -9 -3.9712 | opp_overlap 127671 127670 GGATTTCCCAATAAT GCGGAA TGTA TTCCGC TTTATCATAGGCTAA APL_0109 128720 - 128145 - | hypothetical protein APL_0110 129311 - 128991 - | hypothetical protein APL_0111 129389 - 129940 + | hypothetical protein TERM 187 130237 - 130262 + G 70 -3.9 -4.78237 | gap 1, overlap 130229 130238 130257 GACGTTACAGCCGCT ACGCCGCTATGC ATT GGAT-GCGGCGA TTTTATTCTCCGATA hemE 130046 - 131110 + | uroporphyrinogen decarboxylase APL_0113 131234 - 131824 + | hypothetical protein hupA 131960 - 132232 + | DNA-binding protein HU TERM 188 132271 - 132253 - T 77 -8.9 -3.5936 | opp_overlap 132253 TGCAAAGTTTTTAAA GCCTAGA TTCAT TCTAGGC TTTTTTGTTTCTCTT TERM 189 132253 - 132271 + T 100 -8.9 -5.7827 | opp_overlap 132253 TGCAAAGTTTTTAAA GCCTAGA TTCAT TCTAGGC TTTTTTGTTTCTCTT thyA 133136 - 132285 - | thymidylate synthase TERM 190 133266 - 133279 + G 70 -8.1 -3.65046 | GTCTGCTTAACCTTG GCGGT TCTG ACCGC TTGTTCGAGTAAAAG APL_0116 133224 - 133808 + | hypothetical protein TERM 191 134114 - 134100 - g 75 -7.1 -4.2558 | TACTTTCGATTAAAA CCGGA GGATG TCCGG AAGAATGCGAATATT bioB 133904 - 134914 + | biotin synthase TERM 192 134933 - 134948 + T 100 -10.4 -4.40311 | opp_overlap 134933 GAAGGAATGAAAAAA GCCAGC ATTT GCTGGC TTTTAGATTCTTTAT TERM 193 134948 - 134933 - T 100 -10.4 -5.32565 | opp_overlap 134933 GAAGGAATGAAAAAA GCCAGC ATTT GCTGGC TTTTAGATTCTTTAT cspC 135187 - 134978 - | cold shock-like protein CspC proQ 135550 - 136098 + | putative solute/DNA competence effector prc 136190 - 138202 + | carboxy-terminal protease TERM 194 138231 - 138252 + F 78 -7.3 -4.33854 | GTATTAAATTAGCTG CCGCTTAAT GAAA GTTAGGCGG TTTGCTTTTATTGAT TERM 195 139069 - 139059 - g 82 -2.4 -5.67711 | CAAAGAAAACAAAAA CGCC TGA GCCG GCAACGGCAACCGGT TERM 196 139724 - 139736 + G 73 -5.5 -4.60949 | overlap 139725 TCGGCTAATATTCGT TCGGA CAA TCCGG TTTATTTATACTATG APL_0121 138299 - 139864 + | hypothetical protein TERM 197 139877 - 139915 + F 79 -5.4 -5.15969 | opp_overlap 139881 139882, overlap 139881 139882 TAATTCACAAATATA AAAATTTCCGAGAAGT TTTACTT GCTTCTCGGAACTTTC TTTTTTAGATTAAAC TERM 198 139881 - 139911 + F 83 -6.2 -5.08015 | opp_overlap 139881 139882, overlap 139877 139882 TCACAAATATAAAAA TTTCCGAGAAGT TTTACTT GCTTCTCGGAAC TTTCTTTTTTAGATT TERM 199 139911 - 139881 - f 82 -5.5 -5.24799 | opp_overlap 139881 139877 139882, overlap 139882 TCACAAATATAAAAA TTTCCGAGAAG TTTTACTTG CTTCTCGGAAC TTTCTTTTTTAGATT TERM 200 139882 - 139910 + F 82 -9.7 -3.62369 | opp_overlap 139881 139882, overlap 139881 139877 CACAAATATAAAAAT TTCCGAGAAGT TTTACTT GCTTCTCGGAA CTTTCTTTTTTAGAT TERM 201 139910 - 139882 - f 79 -9 -3.73253 | opp_overlap 139882 139881 139877, overlap 139881 CACAAATATAAAAAT TTCCGAGAAG TTTTACTTG CTTCTCGGAA CTTTCTTTTTTAGAT TERM 202 139937 - 139956 + F 93 -9.4 -4.59342 | opp_overlap 139935 AGATTAAACCTAATG GGCTTATT ACTT AATAAGCC TTTATTTATGGTCGA TERM 203 139965 - 140009 + F 73 -8.9 -3.21218 | ATAAGCCTTTATTTA TGGTCGATAGTAAATAATTTG TGA TAAATCATTTACTATCAATCA TTACTCGTGAAGAAT APL_0122 140036 - 140590 + | hypothetical protein TERM 204 141056 - 141044 - g 75 -3.3 -5.08255 | opp_overlap 141027 141026 141044, overlap 141045 ATTTTGAAAACAAAA TCGCT TTT AGCGG CGATGTGTTATTTAA APL_0123 140608 - 141237 + | glyoxalase II family protein APL_0124 141989 - 141240 - | hypothetical protein TERM 205 141271 - 141317 + g 100 -14.8 -3.81027 | opp_overlap 141284, overlap 141277 141278 141284 GTAAACCATAATTGA TTTAACTGATAAATGGCAGAAT GAT ATTCTGCCATTTTTCGTTTAAA TTTCCCTTCATTGAA TERM 206 141277 - 141311 + g 100 -13.8 -3.8698 | opp_overlap 141284, overlap 141271 141278 141284 CATAATTGATTTAAC TGATAAATGGCAGAAT GAT ATTCTGCCATTTTTCG TTTAAATTTCCCTTC TERM 207 141278 - 141310 + g 100 -15.1 -2.91465 | opp_overlap 141284, overlap 141277 141271 141284 ATAATTGATTTAACT GATAAATGGCAGAAT GAT ATTCTGCCATTTTTC GTTTAAATTTCCCTT TERM 208 141304 - 141284 - G 100 -12.7 -3.98083 | opp_overlap 141278 141277 141271 141284 GATTTAACTGATAAA TGGCAGAAT GAT ATTCTGCCA TTTTTCGTTTAAATT TERM 209 141284 - 141304 + g 100 -12.7 -5.01042 | opp_overlap 141284, overlap 141278 141277 141271 GATTTAACTGATAAA TGGCAGAAT GAT ATTCTGCCA TTTTTCGTTTAAATT TERM 210 141622 - 141606 - G 70 -3.7 -4.82901 | opp_overlap 141614 TTTTTGCCATAAAAA TTGACAA CGC TTGGCAA GATCGAGCTTTGGTA TERM 211 141900 - 141879 - G 100 -10.9 -4.64861 | gap 1, opp_overlap 141878, overlap 141881 TTGGCGTAAAACAAA TC-GCTCGCC GGA GGCGAGCTGA ATCTGTTGGCTGCAA TERM 212 141897 - 141881 - G 93 -13.7 -2.62579 | opp_overlap 141878, overlap 141879 GGCGTAAAACAAATC GCTCGCC GGA GGCGAGC TGAATCTGTTGGCTG APL_0125 142360 - 141986 - | hypothetical protein APL_0126 142727 - 142362 - | HIT-like protein TERM 213 142774 - 142796 + r 71 -6.4 -4.14392 | opp_overlap 142785 TAATAATTCTCTAAT TTTTTGGCAA ATT TTGCAAAAAA TTTTACCGCTTGCGC yfeD 143629 - 142799 - | putative iron transport system membrane protein yfeC 144476 - 143622 - | putative iron transport system membrane protein rnhB 145070 - 144477 - | ribonuclease HII TERM 214 144536 - 144526 - G 77 -8.2 -4.07568 | opp_overlap 144500 144515 CTCTTTCGGTGAAAA GGGG TTG CCCC GAATTGTTCCAGTTT engC 146127 - 145093 - | ribosome-associated GTPase TERM 215 146337 - 146353 + H 91 -12.3 -3.28712 | opp_overlap 146337 146351 TCTAAACGAAAAAAA CCGTCCA AAA TGGACGG TTATAAACCAAAAAG TERM 216 146353 - 146337 - H 100 -12.3 -5.72207 | opp_overlap 146337, overlap 146351 TCTAAACGAAAAAAA CCGTCCA AAA TGGACGG TTATAAACCAAAAAG gcvA 146637 - 147527 + | DNA-binding transcriptional activator GcvA APL_0132 147527 - 148207 + | nucleotidase TERM 217 148422 - 148403 - g 71 -2 -5.24129 | opp_overlap 148405 148406, overlap 148405 CGGCGGGAGAAAAAA TTGTCGCG ATTG CGCGCGAA TTACTGGTAAAAGCG cysB 148207 - 149190 + | transcriptional regulator CysB TERM 218 149245 - 149264 + G 79 -7.8 -4.35116 | ATTTTTGCATTAATT TCAACCGC TTGG GCGGATGA TTTTAATATAAAATA APL_0134 149191 - 149835 + | hypothetical protein TERM 219 149900 - 149852 - T 100 -17.8 -4.84359 | gap 1, opp_overlap 149853 149854, overlap 149854 CGACGGTTACAAAAA GACAAGCGGTCTATTTTTCGCAA TTTT TTGCAAGAAATAGACCGCTTG-C TTTTATGGCTGAAAA TERM 220 149853 - 149900 + T 100 -18 -4.42386 | opp_overlap 149852 149854, overlap 149854 GACGGTTACAAAAAG ACAAGCGGTCTATTTTTCGCAA TTTT TTGCAAGAAATAGACCGCTTGC TTTTATGGCTGAAAA TERM 221 149854 - 149899 + T 100 -21.5 -3.2511 | opp_overlap 149854 149852, overlap 149853 ACGGTTACAAAAAGA CAAGCGGTCTATTTTTCGCAA TTTT TTGCAAGAAATAGACCGCTTG CTTTTATGGCTGAAA TERM 222 149899 - 149854 - T 100 -21.5 -4.04397 | opp_overlap 149853 149854, overlap 149852 ACGGTTACAAAAAGA CAAGCGGTCTATTTTTCGCAA TTTT TTGCAAGAAATAGACCGCTTG CTTTTATGGCTGAAA ansB 150965 - 149916 - | L-asparaginase II pyrG 151269 - 152906 + | CTP synthetase TERM 223 152925 - 152949 + F 100 -10.8 -5.00884 | opp_overlap 152924 ACTATTGCTATAATG TGAGGCGAGT TTTAT ACTCGCCTTA TTTTTTACAAAAAAT TERM 224 153190 - 153207 + G 71 -4.1 -4.84529 | CACTTCATCTTTATC TTAAGCG ATTC CGCTTTA TTTTTCAGTTTGTCG APL_0137 153009 - 153515 + | hypothetical protein TERM 225 153517 - 153550 + T 75 -9.8 -2.60512 | opp_overlap 153519 153527, overlap 153527 AATTTGAGGTTTAAT CATAAAAAAACGGC GTTTAA GCCGTTTTTTTATC TCAATTACTCTTAAC TERM 226 153548 - 153519 - T 86 -12.4 -2.72344 | opp_overlap 153517 153527, overlap 153527 TTTGAGGTTTAATCA TAAAAAAACGGC GTTTAA GCCGTTTTTTTA TCTCAATTACTCTTA TERM 227 153540 - 153527 - T 86 -5.2 -5.71983 | opp_overlap 153527 153517, overlap 153519 TTAATCATAAAAAAA CGGC GTTTAA GCCG TTTTTTTATCTCAAT TERM 228 153527 - 153540 + T 86 -5.2 -5.72616 | opp_overlap 153519 153527, overlap 153517 TTAATCATAAAAAAA CGGC GTTTAA GCCG TTTTTTTATCTCAAT leuD 154163 - 153561 - | isopropylmalate isomerase small subunit leuC 155583 - 154174 - | isopropylmalate isomerase large subunit TERM 229 155528 - 155514 - G 71 -7 -4.14627 | overlap 155515 GGTTGATATAAAGAA TCGGCG TTT CGCCGG CGGCTTCATATACAA TERM 230 155527 - 155515 - G 77 -10.5 -3.08294 | overlap 155514 GTTGATATAAAGAAT CGGCG TTT CGCCG GCGGCTTCATATACA TERM 231 156314 - 156299 - g 71 -9 -3.35597 | overlap 156297 TTTACTGGCGAAAGA GCGTTG GCAA CAACGC TACAAAGAAGAATTT APL_0140 155925 - 157040 + | hypothetical protein TERM 232 157033 - 157075 + F 74 -3.2 -5.22768 | gap 1, opp_overlap 157064, overlap 157045 157065 TAGGCGCTTCCCTGT TAAAATAATTTGTATTTTT ATCTAA AAAGATGCAAAT-ATTTTA TTTGTTTTTTGTTCT TERM 233 157045 - 157070 + F 72 -2.7 -5.3472 | opp_overlap 157064, overlap 157033 157065 TGTTAAAATAATTTG TATTTTTATCT AAAA AGATGCAAATA TTTTATTTGTTTTTT TERM 234 157065 - 157079 + F 93 -5.8 -5.80727 | opp_overlap 157064, overlap 157045 157033 TTATCTAAAAAGATG CAAATA TTT TATTTG TTTTTTGTTCTTTTT APL_0141 157168 - 158430 + | hypothetical protein glxK 158441 - 159574 + | glycerate kinase APL_0143 159593 - 159865 + | putative acylphosphatase TERM 235 159885 - 159934 + T 89 -8.8 -4.36433 | opp_overlap 159888 159891, overlap 159891 AGCGGGGTTTGAATC AGACCAGCGGTTAAATTTGCAA AAAATC TTGTAAATTTAACCGCTTGTGA TTTATTGCTCTTTGA TERM 236 159931 - 159888 - T 89 -13.4 -2.90075 | opp_overlap 159885 159891, overlap 159891 GGGGTTTGAATCAGA CCAGCGGTTAAATTTGCAAA AAAT CTTGTAAATTTAACCGCTTG TGATTTATTGCTCTT TERM 237 159891 - 159928 + T 100 -15.2 -3.69564 | opp_overlap 159888 159891, overlap 159885 GTTTGAATCAGACCA GCGGTTAAATTTGCAA AAAATC TTGTAAATTTAACCGC TTGTGATTTATTGCT TERM 238 159928 - 159891 - T 89 -13.7 -2.69964 | opp_overlap 159891 159885, overlap 159888 GTTTGAATCAGACCA GCGGTTAAATTTGCAAA AAAT CTTGTAAATTTAACCGC TTGTGATTTATTGCT APL_0144 161495 - 159936 - | ATP-dependent endonuclease TERM 239 160837 - 160825 - G 73 -9.1 -3.53444 | opp_overlap 160824 160825 TTATTCTGTTTTAAA CGCTG GCA CAGCG ATTTGACTTTATTCC APL_0145 162878 - 161499 - | hypothetical protein TERM 240 162434 - 162448 + g 71 -8.6 -3.56594 | opp_overlap 162428 162433 AGCAAACAATCAGAT TCGGAT CCG ATCCGA TTTCCAACGCTTTGG TERM 241 162655 - 162665 + g 75 -2.4 -5.33405 | GGGTTATGCAATTCG AGCG ATA CGCC TTTTTCTTTAGTAAG dusA 163915 - 162938 - | tRNA-dihydrouridine synthase A TERM 242 163777 - 163797 + g 93 -11.9 -3.70902 | opp_overlap 163780 CGTATTTGGCGTGAA TGATCGCCG GTG CGGTGATCA TTTCGGTATAAAGCA TERM 243 163995 - 163940 - H 74 -5.6 -4.76311 | gap 1, opp_overlap 163943 CATAAATAAAAATAA CAAGCGGTGGAATTTAGCC-GATTTTT GGT AAATTTGGGGCTAAATTTGACCGCTTG TATAGAGTTCAAAAT TERM 244 164308 - 164292 - g 70 -5.1 -4.57341 | overlap 164293 AATCTCTTTGAAAAA CGCTTGA ATA TCAAGCC GTATGAATACCCCGA APL_0147 164268 - 165245 + | ribonucleoside-diphosphate reductase beta chain TERM 245 166026 - 166036 + G 73 -5.4 -4.66814 | overlap 166022 GCCGTCAAGCTCGGA CGAA AGT TTCG TTTGTTGTTTATCTT TERM 246 166352 - 166369 + G 76 -7.7 -4.12198 | opp_overlap 166351 166352 AAGAATTAGCGAAAC GTTTCGG TGAA CCGGAAC TTTTAAAAGGTTATG rnr1 165232 - 166896 + | ribonucleotide-diphosphate reductase subunit alpha TERM 247 166937 - 166906 - T 87 -13.2 -2.89447 | opp_overlap 166906 166907 166913, overlap 166913 GGTTAATTAGAAGCA TTAAAAACACCACC GAAA GGTGGTGTTTTTAT ATCTGTCTTTAGCAT TERM 248 166906 - 166938 + T 87 -11.6 -3.19687 | gap 1, opp_overlap 166906 166913, overlap 166907 166913 GGTTAATTAGAAGCA T-TAAAAACACCACC GAAA GGTGGTGTTTTTATA TCTGTCTTTAGCATT TERM 249 166907 - 166936 + T 100 -16.7 -3.15257 | opp_overlap 166906 166913, overlap 166906 166913 GTTAATTAGAAGCAT TAAAAACACCACC GAAA GGTGGTGTTTTTA TATCTGTCTTTAGCA TERM 250 166913 - 166930 + T 100 -11.3 -5.08178 | opp_overlap 166913 166906, overlap 166907 166906 TAGAAGCATTAAAAA CACCACC GAAA GGTGGTG TTTTTATATCTGTCT TERM 251 166930 - 166913 - T 100 -11.3 -4.8269 | opp_overlap 166907 166906 166913, overlap 166906 TAGAAGCATTAAAAA CACCACC GAAA GGTGGTG TTTTTATATCTGTCT TERM 252 167007 - 166987 - T 100 -14.1 -5.31275 | opp_overlap 166981 166987 CCCGATTACAAAAAA GCACGAGTA AAT TACTCGTGC TTTCCATTTATAACT TERM 253 166987 - 167007 + T 100 -14.1 -3.89617 | opp_overlap 166987, overlap 166981 CCCGATTACAAAAAA GCACGAGTA AAT TACTCGTGC TTTCCATTTATAACT APL_0149 167631 - 167032 - | putative DNA uptake protein TERM 254 167591 - 167570 - G 75 -8.7 -3.63744 | overlap 167568 TGTTGCTCTAAAAGA CGGCGAAAA TGTG TTTGCGCCG CTTCCGAAATTGAAA TERM 255 167684 - 167698 + H 82 -5.6 -5.31275 | overlap 167685 TTTATCGGATATTCT ACGCCT TAC AGGCGA TTTTTTCTACTCAAA TERM 256 167685 - 167697 + H 81 -9.1 -3.78042 | overlap 167684 TTATCGGATATTCTA CGCCT TAC AGGCG ATTTTTTCTACTCAA TERM 257 168052 - 168032 - H 79 -10.5 -2.79452 | opp_overlap 168030 168032 168033 168035, overlap 168031 ACGGCTCAAGAGAAG CGATTGCGA TTT TCGCAATCA TATTTTTAACCCAAC TERM 258 168032 - 168052 + H 79 -8.3 -3.90048 | opp_overlap 168032 168031, overlap 168030 168033 168035 ACGGCTCAAGAGAAG CGATTGCGA TTT TCGCAATCA TATTTTTAACCCAAC TERM 259 168033 - 168051 + H 84 -11.8 -2.93708 | opp_overlap 168032 168031, overlap 168032 168030 168035 CGGCTCAAGAGAAGC GATTGCGA TTT TCGCAATC ATATTTTTAACCCAA TERM 260 168035 - 168049 + H 71 -8.6 -3.01831 | opp_overlap 168032 168031, overlap 168033 168032 168030 GCTCAAGAGAAGCGA TTGCGA TTT TCGCAA TCATATTTTTAACCC nqrA 168086 - 169435 + | Na(+)-translocating NADH-quinone reductase subunit A TERM 261 169467 - 169454 - g 73 -3.9 -5.01732 | opp_overlap 169443 AATGGGTTTAAAAAA TCTTT TTGA AAAGA TGGAACCTGCGTTTC nqrB 169440 - 170672 + | Na(+)-translocating NADH-quinone reductase subunit B nqrC 170675 - 171448 + | Na(+)-translocating NADH-quinone reductase subunit C nqrD 171448 - 172071 + | Na(+)-translocating NADH-quinone reductase subunit D nqrE 172073 - 172669 + | Na(+)-translocating NADH-quinone reductase subunit E TERM 262 173590 - 173574 - g 73 -5.9 -4.45544 | overlap 173568 TTTGACCAATTAAAA CGTTTAA AAT CTAAACG TAAAATGTCATTCTG TERM 263 173895 - 173882 - g 70 -5.3 -4.4261 | opp_overlap 173875 173882, overlap 173876 TGTTGAAGACGAAAA CATCT TATT AGATG ATTTCGGTGGTTAAT nqrF 172680 - 173909 + | Na(+)-translocating NADH-quinone reductase subunit F TERM 264 173941 - 173996 + F 100 -16.7 -3.8646 | opp_overlap 173950, overlap 173944 173957 GGGTAAATGTACCCT G-ATTTACAAGCGGTGTGATTTGCAAA GTCT TTTGTAAATCACACCGCTTG-AAGTGC TTTAAATTATTAGTG TERM 265 173944 - 173993 + F 100 -21.1 -2.99849 | opp_overlap 173950, overlap 173941 173957 TAAATGTACCCTGAT TTACAAGCGGTGTGATTTGCAAA GTCT TTTGTAAATCACACCGCTTGAAG TGCTTTAAATTATTA TERM 266 173987 - 173950 - f 100 -18.7 -3.35996 | opp_overlap 173944 173941 173957 TACCCTGATTTACAA GCGGTGTGATTTGCAAA GTCT TTTGTAAATCACACCGC TTGAAGTGCTTTAAA TERM 267 173997 - 174052 + F 75 -8 -3.85698 | overlap 174003 CACCGCTTGAAGTGC TTTAAATTATTAGTGAAAAGGTTTGT TTTT ACAGGCTTTTTCAATAGTAATTTTAA TTTATAAGGGCGGGC TERM 268 174003 - 174046 + F 80 -7 -4.61873 | overlap 173997 TTGAAGTGCTTTAAA TTATTAGTGAAAAGGTTTGT TTTT ACAGGCTTTTTCAATAGTAA TTTTAATTTATAAGG TERM 269 174540 - 174530 - g 76 -6.8 -4.4448 | opp_overlap 174539, overlap 174519 174518 174531 174537 AAACGCTTAAATAAA GCAC CAA GTGC AGAACAGATTGCTGC apbE 174116 - 175147 + | thiamine biosynthesis lipoprotein ApbE precursor APL_0157 175160 - 175405 + | hypothetical protein TERM 270 175422 - 175446 + F 88 -7.1 -5.00851 | overlap 175423 175424 TTTAAAATCTCCCCC ATCCCCTCTTT ATT AAAGAGGGGCG TTTTCTTTGATTAAT TERM 271 175423 - 175445 + F 86 -10.6 -3.58884 | overlap 175422 175424 TTAAAATCTCCCCCA TCCCCTCTTT ATT AAAGAGGGGC GTTTTCTTTGATTAA TERM 272 175424 - 175444 + F 93 -14.1 -2.74246 | overlap 175423 175422 TAAAATCTCCCCCAT CCCCTCTTT ATT AAAGAGGGG CGTTTTCTTTGATTA TERM 273 175533 - 175579 + F 77 -5.6 -4.99568 | gap 3, opp_overlap 175539, overlap 175536 175539 GTTAGGGAAGATTCA TAGCAAGCGGTG-AAAAG-CAAA AATT TTTGATTTTTTCACCGCTTG-TA TTTTATTTAATGTTA TERM 274 175536 - 175577 + F 93 -9.8 -4.09862 | gap 2, opp_overlap 175539, overlap 175533 175539 AGGGAAGATTCATAG CAAGCGGTG-AAAAG-CAAA AATT TTTGATTTTTTCACCGCTTG TATTTTATTTAATGT trmU 175634 - 176803 + | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TERM 275 176868 - 176820 - T 89 -12 -3.21924 | opp_overlap 176822, overlap 176822 176825 TGATTGTTTACAATA CATAAGCGGTCGTTTTTTGTTA GTTTT TAGCAAAAAATGACCGCTTATT TTTTAGATTAACGTA TERM 276 176866 - 176822 - T 95 -14.6 -3.17325 | opp_overlap 176822, overlap 176820 176825 ATTGTTTACAATACA TAAGCGGTCGTTTTTTGTTA GTTTT TAGCAAAAAATGACCGCTTA TTTTTTAGATTAACG TERM 277 176822 - 176866 + T 100 -19.7 -5.15969 | opp_overlap 176822 176820 176825 ATTGTTTACAATACA TAAGCGGTCGTTTTTTGTTAG TTT TTAGCAAAAAATGACCGCTTA TTTTTTAGATTAACG TERM 278 176863 - 176825 - T 91 -11.9 -3.72788 | opp_overlap 176822, overlap 176822 176820 GTTTACAATACATAA GCGGTCGTTTTTTGTTA GTTTT TAGCAAAAAATGACCGC TTATTTTTTAGATTA hcaT 178030 - 176876 - | putative 3-phenylpropionic acid transporter TERM 279 176931 - 176917 - G 71 -4.2 -4.91109 | TCGGCACGATAAAAA TTGCCG GTA CCGCAA TAATCGCCATCAGCC proC 178857 - 178027 - | pyrroline-5-carboxylate reductase TERM 280 178868 - 178898 + H 70 -8.2 -3.32844 | CTCATAAAAATCTCC CCCAGCCCCTCTTT ATA AAAGAGGGGAGCGG TTCTCCAATCAGCCC TERM 281 178941 - 178919 - H 85 -8.6 -4.12902 | CAATCAGCCCTAAAA TTCCCTTTTT TAG AAAAAAGGAA GGGGAGATTTGATTA TERM 282 179166 - 179178 + G 72 -7.7 -3.86063 | TTGGTCGAGTCCGCT TTCCG GCT CGGAA TTATTACATTTTTCT TERM 283 179470 - 179452 - g 80 -8.8 -3.91084 | opp_overlap 179451 GCAGGCTCAAGCAAA CGAGCGGA GGA TACGCTCG CATTATTGCGTAAAA rdgC 179020 - 179928 + | recombination associated protein APL_0162 179938 - 180543 + | putative phosphatase TERM 284 180679 - 180656 - T 100 -11 -5.26119 | opp_overlap 180653 GCTTCAAAAAGAAAA GGCACTAGTG AGGA CACTGGTGCC AGCATTTCAGTTTTA TERM 285 180761 - 180735 - T 80 -6.5 -4.67608 | overlap 180737 TATTTCAATAGAAAA CACTCTCTCCC CTTGT GGGAGAGAGAC AGTAAAAATTGCGTC TERM 286 180759 - 180737 - T 100 -13.5 -3.94773 | overlap 180735 TTTCAATAGAAAACA CTCTCTCCC CTTGT GGGAGAGAG ACAGTAAAAATTGCG APL_0163 182578 - 180719 - | anaerobic ribonucleoside triphosphate reductase APL_0164 183050 - 182583 - | hypothetical protein rnfA 183432 - 184013 + | Na(+)-translocating NADH-quinone reductase subunit E TERM 287 184062 - 184082 + G 100 -11.9 -4.20042 | overlap 184047 TTGCGATTGCCGTGA TCGCACTGA TTT TCGGTGCGA TTTTGGGCTATTCGT rnfB 184034 - 184624 + | electron transport complex protein RnfB TERM 288 184853 - 184839 - g 70 -5.6 -4.32049 | GATAACGTATTAAAA GGACAG CCG CTGACC AAAGGCGATAACTAT TERM 289 184872 - 184857 - g 75 -9 -3.72893 | CAGCCGCTGACCAAA GGCGAT AACT ATCGCC AGTTACCGGTACACG TERM 290 186715 - 186702 - g 71 -6.7 -4.23434 | GAAAATACCGGAAAA GTTGC AACC GCAAC AGAAACGGAAGACCC rnfC 184617 - 186929 + | electron transport complex protein RnfC TERM 291 187115 - 187129 + G 80 -4.9 -5.08824 | overlap 187116 187127 TGCGTGATGTGATGA TCGGC AGTAC GCCGG TTTTTTGGATGAAGC APL_0168 186922 - 187566 + | hypothetical protein TERM 292 187774 - 187791 + G 75 -3.4 -5.0916 | gap 1, opp_overlap 187759 CGCTATTGCAAAATT GC-GTCG AAAAC CGACCGC TTTTTATGTTGCGGA TERM 293 188033 - 188055 + G 70 -7.6 -3.58518 | opp_overlap 188032 188036 188037, overlap 188036 ATTGATTTATTAAAC GAACCGCCGA CAT TCGGCGATGC TATTTCGTTAGTGTT TERM 294 188052 - 188036 - g 80 -10.1 -3.57418 | opp_overlap 188036 188033, overlap 188032 188037 GATTTATTAAACGAA CCGCCGA CAT TCGGCGA TGCTATTTCGTTAGT TERM 295 188051 - 188037 - g 81 -11.4 -2.73969 | opp_overlap 188036 188033, overlap 188036 188032 ATTTATTAAACGAAC CGCCGA CAT TCGGCG ATGCTATTTCGTTAG rnfD 187586 - 188632 + | electron transport complex protein RnfD TERM 296 188672 - 188689 + G 70 -7.7 -3.61371 | overlap 188675 AGTATGCGTTATTAT TAGGCGC GATT GCGCTTA TTTGCACTGCCGTTT TERM 297 188675 - 188686 + G 72 -7.2 -3.9392 | overlap 188672 ATGCGTTATTATTAG GCGC GATT GCGC TTATTTGCACTGCCG rnfG 188632 - 189264 + | electron transport complex protein RnfG TERM 298 189615 - 189630 + G 73 -2.6 -5.08601 | overlap 189610 TTTGCTTATCCGGTT TATCAA TCGC TTGGTA TTTTTATTCCGCTGA rnfE 189276 - 189962 + | SoxR-reducing system protein RsxE TERM 299 190092 - 190118 + G 78 -5.9 -4.82901 | TTCTGGCTTATGTGC CGGCTCGTTTA CGTGA TAAATTAGCCG TTTTTGTCGGAAGAG msbB 189971 - 190927 + | lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase TERM 300 190948 - 190965 + T 100 -12.7 -5.69473 | opp_overlap 190948 AACGATGATAAAAAA CCGAGCG TTTT CGCTCGG TTTTTTTGTCGTATG TERM 301 190965 - 190948 - T 100 -12.7 -5.33785 | opp_overlap 190948 AACGATGATAAAAAA CCGAGCG TTTT CGCTCGG TTTTTTTGTCGTATG APL_0173 191973 - 190987 - | hypothetical protein TERM 302 191267 - 191279 + g 80 -4.8 -5.14563 | GCGATGACCATCATT TGCG AATCG CGCA TTTTTTGGTAGAGCA TERM 303 191789 - 191765 - G 78 -5.8 -4.84761 | gap 1 ATAGCTTGAGAAAAA CGACGG-TAAT AGTC ATCAACCGTCG AGTTACGTTTCACTT TERM 304 192038 - 192020 - H 91 -4.6 -5.81412 | opp_overlap 192020 192022 TTTAGGTAAAAAAAA GATCTC TAGCGAG GAGATC TGTTAAAAATTGAAA TERM 305 192097 - 192065 - H 87 -6.4 -5.49809 | gap 1, opp_overlap 192073 192076, overlap 192067 GAAATGCCAAAAAAA GAGCCAAGCACCATA GCGA TATGATGTTTGGC-C TAAATGAGTGTTTAA TERM 306 192096 - 192067 - H 100 -10.1 -4.36993 | opp_overlap 192073 192076, overlap 192065 AATGCCAAAAAAAGA GCCAAGCACCATA GCGA TATGATGTTTGGC CTAAATGAGTGTTTA TERM 307 192164 - 192180 + H 93 -9.5 -4.36914 | TCCTTTCTGGCACTA GGACTAT AGT ATAGTCC TTTTATCGGAAGAAA TERM 308 192409 - 192381 - H 71 -7.6 -3.54129 | TATATTTCGCTCAAA TCCTTCTATATT ATCCG AATTTAGAAGGA CATCTATGAAACTCG TERM 309 192832 - 192808 - g 75 -2.1 -5.40464 | overlap 192812 TACGATAAAGAAAAA TTAGCGAATCC GCC GAAATCGTTAA AAGAATTGGTGGAAC tbpA 192415 - 193380 + | thiamine-binding periplasmic protein precursor TERM 310 193403 - 193424 + F 100 -11.7 -5.25699 | ATTCATCTTTTTTCA TGGCTAAAG GAAT CTTTAGCCA TTTTTCTTGTCTGCT dksA 193587 - 194036 + | DnaK suppressor protein TERM 311 194068 - 194093 + F 95 -8.5 -4.95806 | gap 1, opp_overlap 194068 194070, overlap 194070 ATAAACGGCAATGAA TA-TGGACAATG TTA CATTGTCCATTA TTTTTATGATCATTT TERM 312 194092 - 194068 - f 81 -10.1 -3.39471 | opp_overlap 194068 194070, overlap 194070 ATAAACGGCAATGAA TATGGACAATG TTA CATTGTCCATT ATTTTTATGATCATT TERM 313 194090 - 194070 - f 91 -12.7 -3.25941 | opp_overlap 194070 194068, overlap 194068 AAACGGCAATGAATA TGGACAATG TTA CATTGTCCA TTATTTTTATGATCA TERM 314 194070 - 194090 + F 100 -12.7 -4.56153 | opp_overlap 194068 194070, overlap 194068 AAACGGCAATGAATA TGGACAATG TTA CATTGTCCA TTATTTTTATGATCA TERM 315 194393 - 194383 - g 76 -2.6 -5.26316 | TTATTGCACAAAAAA TTTA CAG TAAA TGCCGGACATTATGA pcnB 194179 - 195711 + | putative poly(A) polymerase TERM 316 195722 - 195743 + F 95 -8.7 -5.07652 | opp_overlap 195721 AATAAATTGAAGTAT GGCGCAAGT GAGA GCTTGTGCC TTTTCTTTTAGCAAG folK 195781 - 196251 + | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase TERM 317 196260 - 196277 + T 100 -11.3 -5.3236 | opp_overlap 196260 ATTCTAAGTAAAAAA TGCACGG CAAT CCGTGCA TTTTTTGTAACTTAT TERM 318 196277 - 196260 - T 100 -11.3 -5.27477 | opp_overlap 196260 ATTCTAAGTAAAAAA TGCACGG CAAT CCGTGCA TTTTTTGTAACTTAT APL_0178 196510 - 196289 - | hypothetical protein APL_0179 199203 - 196507 - | hypothetical protein TERM 319 196686 - 196702 + g 76 -7.9 -4.15222 | CGTCCAATACCATTT CGCCGGT TGA ACCGACG TTTATTAAACCGCGT TERM 320 196886 - 196908 + g 76 -7 -4.47271 | CCCTCCAGCCAAAAC GGTAAAGTGG CAT TCGCTTTGCC TTTTAATTCAATTTG TERM 321 197011 - 196982 - G 83 -9.4 -3.92542 | GCCAGTTTTAAATAA GCGATTTGCGTT TGCGGC AAGGCAAATCGC TCGACATTCAATTCT TERM 322 199203 - 199168 - G 76 -7.6 -4.13767 | gap 1, overlap 199170 199171 TTGCTTACCTGAAAA CAGCGTTGCACCGCCGA CAA TCAGCAGTGCAAC-CAA AGTCCCTATAACAAG TERM 323 199201 - 199170 - G 100 -12.4 -3.6692 | gap 1, overlap 199168 199171 GCTTACCTGAAAACA GCGTTGCACCGCCGA CAA TCAGCAGTGCAAC-C AAAGTCCCTATAACA TERM 324 199201 - 199171 - G 89 -12.6 -2.79831 | overlap 199170 199168 CTTACCTGAAAACAG CGTTGCACCGCCGA CAA TCAGCAGTGCAACC AAAGTCCCTATAACA APL_0180 200000 - 199236 - | hypothetical protein TERM 325 199513 - 199500 - G 71 -2.3 -5.2166 | overlap 199503 TAATAATTTAAAAAA GACGT CAAG ACGAC TTTTCGCCAACATTA TERM 326 200014 - 200030 + H 86 -2.9 -5.77853 | overlap 200016 ATTGGTAAAAGTGCG TGTGTGG CAA CCTCATA TTTTTTTTCGGAATT gloA 200154 - 200561 + | lactoylglutathione lyase TERM 327 200549 - 200537 - f 77 -3.4 -5.48213 | opp_overlap 200537 TATCGAAAATAAAAA TGCA CAGGC TGCA TTAGGTAACTAATCG TERM 328 200609 - 200658 + F 95 -8.9 -5.27335 | gap 1 ATTTTTATGGCGTAA GCGGTCAAATTTTGAGGA-AATTT TGC AAATTCTCTTTAAAATCCGACCGC TTTTTCTTTAGACGG dnaQ 200701 - 201357 + | ribonuclease T TERM 329 201427 - 201372 - T 100 -12.8 -5.51402 | opp_overlap 201372 201375 ATATATTTAAAAAAA CAAGCGGTCTATTTTCCTTATTGCTT TGCA AAAAAGTCGGGAAAATAGACCGCTTG TGTATTTCCAGCTCG TERM 330 201372 - 201427 + T 95 -15 -3.25204 | opp_overlap 201372, overlap 201375 ATATATTTAAAAAAA CAAGCGGTCTATTTTCCTTATTGCTT TGCA AAAAAGTCGGGAAAATAGACCGCTTG TGTATTTCCAGCTCG TERM 331 201375 - 201424 + T 90 -10.9 -3.76232 | opp_overlap 201372, overlap 201372 TATTTAAAAAAACAA GCGGTCTATTTTCCTTATTGCTT TGCA AAAAAGTCGGGAAAATAGACCGC TTGTGTATTTCCAGC APL_0183 202725 - 201448 - | Mn2+/Fe2+ transporter TERM 332 203236 - 203200 - R 71 -6.6 -4.22346 | gap 1, opp_overlap 203204 203209, overlap 203209 TAAATGTACTGAAAA CGATAC-AAAGGCTCCG ATAA CGGAGCCTTTCGCTTTG CTTTATAAGCGGCCT TERM 333 203204 - 203232 + r 81 -8.2 -4.13995 | gap 1, opp_overlap 203200 203209, overlap 203209 TGTACTGAAAACGAT AC-AAAGGCTCCG ATAA CGGAGCCTTTCGC TTTGCTTTATAAGCG TERM 334 203226 - 203209 - R 100 -12.7 -4.20797 | opp_overlap 203204 203209, overlap 203200 TGAAAACGATACAAA GGCTCCG ATAA CGGAGCC TTTCGCTTTGCTTTA TERM 335 203209 - 203226 + r 100 -12.7 -3.90943 | opp_overlap 203209 203200, overlap 203204 TGAAAACGATACAAA GGCTCCG ATAA CGGAGCC TTTCGCTTTGCTTTA TERM 336 203242 - 203297 + r 71 -6.5 -4.1023 | gap 1, opp_overlap 203245, overlap 203245 TTTCGCTTTGCTTTA TAAGCGGCCTAATTTTTATTTCTTTT CGCAA AAAAGTA-TGGAAATTAGACCGCTTG TTATTATTTCCGATT tyrA 204422 - 203301 - | bifunctional chorismate mutase/prephenate dehydrogenase TERM 337 204144 - 204161 + g 71 -4.1 -4.78077 | overlap 204147 ATGAATATGCGGATT CGTGGTT TTAA AACCGTG TTTGTTTTCATTCAC TERM 338 204223 - 204245 + g 80 -9.8 -3.61398 | overlap 204222 TCTTCGATTAAGTCG GCGGGAACGC CTT GCTTTTCCGC TTCTTGACGGCGGGC TERM 339 204375 - 204391 + g 70 -5.9 -4.35483 | overlap 204377 CAGTCGGATTAATTG TTGATCA ACT TGATCGA TTTGTTCTCGTAAAG aroF 205596 - 204535 - | phospho-2-dehydro-3-deoxyheptonate aldolase APL_0186 206684 - 205638 - | ADP-heptose:LPS heptosyltransferase I TERM 340 206733 - 206750 + r 91 -12.7 -3.16267 | opp_overlap 206733 ATCGAATAGTAAAAA CCCACGC TTTT GCGTGGG TTCGGTCTGATTAAA TERM 341 206750 - 206733 - R 100 -12.7 -4.88228 | opp_overlap 206733 ATCGAATAGTAAAAA CCCACGC TTTT GCGTGGG TTCGGTCTGATTAAA pykA 208211 - 206772 - | pyruvate kinase TERM 342 208172 - 208183 + g 79 -3 -5.34365 | CGGTAGCTGGACCCA TTGT ACAA ACAA TTTTTGTTCTTCTGA sixA 208343 - 208834 + | phosphohistidine phosphatase TERM 343 208854 - 208870 + F 74 -2.4 -5.43866 | TAGGTTTTAGGGGGA TAAAAA AATTA TTTTTA TTTTTTTAGAAATTG TERM 344 208934 - 208918 - f 100 -10.9 -4.7078 | CCAATTATGTAAAAA GTGCGTA TCA TACGCAC CTCAAAATCAGCTGA TERM 345 208955 - 208942 - f 71 -6.7 -4.15006 | ATACGCACCTCAAAA TCAGC TGAA GCTGA CATAGATTGATTAAA TERM 346 208967 - 208998 + F 91 -11.8 -3.73386 | opp_overlap 208971 208973, overlap 208973 CTGACATAGATTGAT TAAAGAGTACGGTT TTTT AGCCGTACTTTTTA TTTGGATAGTTATCT TERM 347 208973 - 208992 + F 95 -8.6 -5.30616 | opp_overlap 208973 208971, overlap 208967 TAGATTGATTAAAGA GTACGGTT TTTT AGCCGTAC TTTTTATTTGGATAG TERM 348 209395 - 209382 - g 71 -3.1 -5.011 | gap 1, opp_overlap 209383 209383, overlap 209383 209384 AGGTAAACAAGAAAA TGGCGG GAT CCG-CA CTTTTACGCGAACCC TERM 349 209563 - 209610 + G 76 -10.6 -3.03159 | opp_overlap 209596 CGCTTTAACGATTCA CGGTCGTACGCGTCATTGCCTT TTTG AAGGTAATGCCGAATACGACAG TATTAAAGCCGTTAA dus 209057 - 210019 + | tRNA-dihydrouridine synthase B fis 210047 - 210343 + | DNA-binding protein Fis TERM 350 210334 - 210356 + T 95 -8.6 -5.08824 | opp_overlap 210333 ATTAAAAAAATACGG TATGGGTTAA TTT TTAACTCATA TTTTTTCCATAAAAA TERM 351 210392 - 210373 - T 100 -10.8 -5.24129 | opp_overlap 210373 TTTTTCCATAAAAAA GGCTATTC CGTT GAATAGCC TTTTTTGTATTTTGT TERM 352 210373 - 210392 + T 100 -10.8 -5.65678 | opp_overlap 210373 TTTTTCCATAAAAAA GGCTATTC CGTT GAATAGCC TTTTTTGTATTTTGT APL_0191 211766 - 210408 - | SNF family Na+-dependent transporter TERM 353 211711 - 211688 - G 76 -11 -2.72043 | overlap 211687 AAGTCGCCCCGAAAC CGACGGTCGC CCCT GCAACCGTCA TCACATAAGCCAATC dam 212664 - 211831 - | DNA adenine methylase TERM 354 212400 - 212384 - G 77 -3.6 -5.08601 | CGAGCGTAATAAAAA GAGGCG GTATT CGCTTC GGAAGCTAAAAAAAG TERM 355 212590 - 212567 - G 100 -12.4 -4.0825 | opp_overlap 212565 212564 212564 GGTTCAACGAAACAA GCCCCCTGAG CAGA CTTAGGGGGC AAATGTTTACGAATT aroB 213757 - 212657 - | 3-dehydroquinate synthase aroK 214352 - 213831 - | shikimate kinase mrcA 217181 - 214614 - | membrane carboxypeptidase/penicillin-binding protein TERM 356 215165 - 215201 + g 84 -11.6 -3.13343 | opp_overlap 215162 215163 CGCCGCTGATAACGC GCGGCGCATAACGG GTTTCCGTA CCGTTTTGTGCCGC TTCGGTCATTAAACT TERM 357 216280 - 216293 + g 70 -3.7 -4.77157 | AAGTTCTCGCTTAAT GCGTC TTGC GCCGC TTTTTGGTCGGTTGA TERM 358 217929 - 217950 + G 80 -6.5 -4.78848 | opp_overlap 217929, overlap 217931 AAGCAGCTGGAATTA CCGGATTCG ATAA CGGATCCTG TTTTATATTTAACCG TERM 359 217931 - 217948 + G 74 -7.7 -4.00843 | opp_overlap 217929, overlap 217929 GCAGCTGGAATTACC GGATTCG ATAA CGGATCC TGTTTTATATTTAAC APL_0196 217320 - 218000 + | hypothetical protein APL_0197 218072 - 218503 + | hypothetical protein APL_0198 218506 - 219033 + | hypothetical protein APL_0199 219026 - 219430 + | hypothetical protein hofQ 219442 - 220740 + | type II secretory pathway, component HofQ TERM 360 220811 - 220834 + F 71 -5.3 -4.53036 | ATACGAATTTTTATG TGGCGGT TGATTAAAAT ACCGCCA TTTTGCTCTTTATAA nusB 220866 - 221279 + | transcription antitermination protein NusB TERM 361 221294 - 221317 + F 88 -6 -5.70829 | ATTTATGGATAAAAA GAAGGTGAGC GTAG GTTTGCCTTC TTTTTTTGTGCTGTT TERM 362 221934 - 221946 + G 70 -5.5 -4.46656 | overlap 221935 AGTCGAATTGGGGCT TGCTC TAC GAGCG TTTTCCTGTTGTGCG thiL 221347 - 222309 + | thiamine-monophosphate kinase TERM 363 222342 - 222330 - g 70 -3.5 -4.83593 | AATAACGATGAAAAA TTTTA ACT TAAAA AATCCGATTCATTTA TERM 364 222455 - 222468 + G 75 -2.3 -5.33866 | TATTGTGGAATTTGA CCGAG AGTT CTCTG TTTTTTATCGGTTTA pgpA 222322 - 222795 + | phosphatidylglycerophosphatase A TERM 365 222846 - 222856 + G 90 -2.4 -6.0427 | GCAGGCTTAGCCAGC CCCG GTC CGGA TTTTTTTTATGTGGT TERM 366 222991 - 223007 + G 78 -5.1 -4.94972 | opp_overlap 222991 GGTTGAGTAATACGA TTGGTAC AGT GTTCCAA TTTTTAATTATGGTG APL_0204 222804 - 223430 + | putative threonine efflux protein TERM 367 223486 - 223437 - T 100 -16.8 -3.73097 | opp_overlap 223443 223444 223449, overlap 223443 223444 223449 ATAAGCTAACAAAGA TCTAAAGTAAAACAGGCTTACG TTTTTG CGTAAGCCTGTTTTAGTTTCGA GATTAGATGATATTC TERM 368 223443 - 223480 + T 100 -15.1 -3.61268 | opp_overlap 223437 223443 223444 223449, overlap 223444 223449 TAACAAAGATCTAAA GTAAAACAGGCTTACGT TTTT GCGTAAGCCTGTTTTAG TTTCGAGATTAGATG TERM 369 223480 - 223443 - T 100 -14.4 -3.84931 | opp_overlap 223443 223444 223449, overlap 223437 223444 223449 TAACAAAGATCTAAA GTAAAACAGGCTTACG TTTTTG CGTAAGCCTGTTTTAG TTTCGAGATTAGATG TERM 370 223444 - 223479 + T 100 -18.6 -2.7644 | opp_overlap 223443 223437 223444 223449, overlap 223443 223449 AACAAAGATCTAAAG TAAAACAGGCTTACGT TTTT GCGTAAGCCTGTTTTA GTTTCGAGATTAGAT TERM 371 223479 - 223444 - T 100 -17.9 -2.89874 | opp_overlap 223444 223443 223449, overlap 223443 223437 223449 AACAAAGATCTAAAG TAAAACAGGCTTACG TTTTTG CGTAAGCCTGTTTTA GTTTCGAGATTAGAT TERM 372 223474 - 223449 - T 100 -13.4 -4.57516 | opp_overlap 223444 223443 223449, overlap 223444 223443 223437 AGATCTAAAGTAAAA CAGGCTTACG TTTTTG CGTAAGCCTG TTTTAGTTTCGAGAT TERM 373 223449 - 223474 + T 100 -14.1 -4.55128 | opp_overlap 223449 223444 223443 223437, overlap 223444 223443 AGATCTAAAGTAAAA CAGGCTTACGT TTTT GCGTAAGCCTG TTTTAGTTTCGAGAT APL_0205 224526 - 223489 - | rRNA methyltransferase TERM 374 223803 - 223835 + g 80 -10.5 -3.55444 | opp_overlap 223788 223802, overlap 223789 CGCCTTCGGCAACAC GTGCCGCAGCGCTTG AAT TAAGCGTATCGGCAC TTTCGACAATCACAC TERM 375 224232 - 224258 + g 93 -4.3 -5.88197 | overlap 224241 TTTTCTTAATTTTCT CCGGTGCGC GAGGAGAAA GCGGGCCGG TTTTTTTCTCTTTCA TERM 376 224736 - 224712 - g 80 -11.5 -2.64412 | opp_overlap 224699 224698, overlap 224698 224711 224709 CCCAATGTTAAACAT TGCTATTCGTG CTG CACGAAAAGCA GGCAATATTATTGCG suhB 224692 - 225504 + | inositol-1-monophosphatase (IMPase) TERM 377 225528 - 225581 + F 81 -9.8 -3.43071 | gap 1, opp_overlap 225528 225530 225546, overlap 225543 225546 TTAAACCATAGATTA CACGGATAAGGC-AAGTAAGCGG TCGAATTTT CCGCTTATTTTGCAATATCCGTG TTAATTCGTGTGGGA dxs 225625 - 227478 + | 1-deoxy-D-xylulose-5-phosphate synthase TERM 378 227501 - 227487 - T 86 -2.8 -5.80003 | overlap 227489 TCAATAAACAAAAAA GCTCAT CTT ATGATC TGACCCCAAAAAGTT TERM 379 227565 - 227533 - T 79 -9.9 -3.17392 | opp_overlap 227533 GACTGTTTAATTTAA GGACTGAGTTCTGTA TTG TACAAGGCTCAGTCC TTTTAATTTCACTTG TERM 380 227533 - 227565 + T 100 -12.1 -4.5852 | opp_overlap 227533 GACTGTTTAATTTAA GGACTGAGTTCTGTA TTG TACAAGGCTCAGTCC TTTTAATTTCACTTG APL_0208 227862 - 227524 - | putative transposase-like protein APL_0209 228212 - 227895 - | putative transposase-like protein TERM 381 228055 - 228037 - G 71 -2.4 -5.09225 | ATCGCACCCAAAAAA TCACGTAA CTT TAACGTAA TACGACGATAGCCGT APL_0210 228733 - 228224 - | transposase and inactivated derivatives glyA 230087 - 228822 - | serine hydroxymethyltransferase TERM 382 229388 - 229378 - G 79 -8.2 -4.14764 | GCGGAAAGAATTAAA CCGC CGC GCGG ACCGCCTAAAGTTTT TERM 383 230139 - 230118 - R 80 -7.3 -4.59342 | opp_overlap 230118, overlap 230119 TTGATGATAAATAAA GTTGCGCAA ACGT TTGCGCAAA TGAGTTTAACTGCAT TERM 384 230138 - 230119 - R 87 -10.8 -3.34882 | opp_overlap 230118, overlap 230118 TGATGATAAATAAAG TTGCGCAA ACGT TTGCGCAA ATGAGTTTAACTGCA TERM 385 230303 - 230285 - R 100 -10.3 -4.431 | TATTTACCGACAAAA GGCACTC GGACG GAGTGCC TAAGCGAAAAGAAAT pnnK 231205 - 230318 - | inorganic polyphosphate/ATP-NAD kinase TERM 386 230921 - 230907 - G 82 -5.6 -5.02476 | opp_overlap 230897 230907 ATATCGGTTAAAAAA CCTAGG TTA CCTCGG TTAATACCGATAAGC APL_0213 234643 - 231296 - | hypothetical protein TERM 387 231911 - 231929 + g 89 -3.8 -5.72622 | opp_overlap 231914, overlap 231914 ACCCGGGCGGCAGAA TATCGGTT CCG AGCCGTTA TTTTTTGTTTGTAAA TERM 388 231914 - 231926 + g 75 -5.5 -4.9072 | opp_overlap 231914, overlap 231911 CGGGCGGCAGAATAT CGGTT CCG AGCCG TTATTTTTTGTTTGT TERM 389 231976 - 231990 + g 82 -5.7 -5.00884 | opp_overlap 231976 231975 GTAGCAATAAAATAT TTGCC TGTGT GGCAA TTTTTTCAGGGCGAT TERM 390 234197 - 234180 - G 82 -7.7 -4.43208 | opp_overlap 234183, overlap 234181 ATAGCTTCAAACAAA CGAGTGG AAAT CCACTCA TGTCGATAACAATCA TERM 391 234196 - 234181 - G 71 -9 -3.25202 | opp_overlap 234183, overlap 234180 TAGCTTCAAACAAAC GAGTGG AAAT CCACTC ATGTCGATAACAATC APL_0214 235596 - 234640 - | hypothetical protein TERM 392 235740 - 235750 + r 70 -4 -4.85599 | CCCCCACCAACCGAG TGTT TTC AACA TTTTTCTAAGCTGCC TERM 393 236231 - 236212 - R 82 -10 -3.56958 | opp_overlap 236211 236214 TGAAGAAGAGTAGAA TACGCCGC ACTT GCGGCATA GATTTCTAAGCTGCC APL_0215 237874 - 237305 - | hypothetical protein APL_0216 238872 - 237877 - | hypothetical protein TERM 394 238009 - 238036 + g 72 -9.2 -3.18264 | gap 1 GAAATCGATTTTTTC TTTTGGC-TGGCG GAA CGCCGTGCCAAGA TTAGTGACTGCGCCA TERM 395 238568 - 238590 + g 70 -7.8 -3.57971 | opp_overlap 238568 238584 TCATTACAAACATTA GGTTTACCTT CAA AAGGTAAAAC TTTACAGGTAAATCT APL_0217 239833 - 238874 - | hypothetical protein TERM 396 239408 - 239419 + g 78 -4.4 -5.09173 | opp_overlap 239416 239417, overlap 239417 ACCGGCAATTCGTTG TTGC ATAA GCAA TTTTTTGCAATGTTC TERM 397 239558 - 239570 + g 95 -4.7 -5.75342 | opp_overlap 239559, overlap 239559 TTCCTCGATAATGGA AGGCG AAT CGCCA TTTTTTTTGAGAGGG TERM 398 239559 - 239569 + g 77 -8.2 -4.04482 | opp_overlap 239559, overlap 239558 TCCTCGATAATGGAA GGCG AAT CGCC ATTTTTTTTGAGAGG TERM 399 239740 - 239720 - G 76 -11.1 -2.50994 | overlap 239719 GCTAAGTGCATGAAT CGCACCGGT AAA ACCGGTGAG TGAAGGAAAACCATA APL_0218 241179 - 239830 - | hypothetical protein TERM 400 241010 - 241024 + g 71 -4.3 -4.77719 | opp_overlap 241010, overlap 241002 GCGATATGAAGCCAA GTATC TAGCC GATAC TTTTCTTCGCTTTTG TERM 401 241508 - 241521 + H 93 -8.1 -5.61881 | opp_overlap 241508 AAGATTCAAATCAGA CCGCT TGTC AGCGG TTTTTATTTTTAAAC TERM 402 241882 - 241859 - g 73 -5.3 -4.74103 | TCCCGAATGTAAAAA TGGCGATTG GCCCGA CAATCGACA ACGGTTTCTATTATG thrS 241585 - 243516 + | threonyl-tRNA synthetase TERM 403 243553 - 243536 - f 100 -11.3 -5.03715 | opp_overlap 243536 ATTATTTGTAAAAAA GCGGTCA AATT TGACCGC TTTTTTGTTTATGTA TERM 404 243536 - 243553 + F 100 -11.3 -5.76237 | opp_overlap 243536 ATTATTTGTAAAAAA GCGGTCA AATT TGACCGC TTTTTTGTTTATGTA APL_0220 243658 - 244332 + | putative lipoprotein TERM 405 244553 - 244531 - g 72 -6.3 -4.28651 | gap 1 ATCAAAATGGCAAAA GATGCG-CAG AAAC CTGTCGCACC CGGCGTATACGGGCA APL_0221 244342 - 244689 + | hypothetical protein APL_0222 244701 - 245360 + | putative lipoprotein TERM 406 245373 - 245398 + F 81 -7.7 -4.29845 | opp_overlap 245360 245373, overlap 245360 TAGCTGTATATTATA TAAGCTCTTAA CTTA TTAGGGGCTTA TTTTAACTTAGGTTC infC 245638 - 246117 + | translation initiation factor IF-3 TERM 407 246130 - 246165 + F 83 -9.8 -3.79419 | opp_overlap 246135 246155, overlap 246135 TAATTTATTCTTGCA TAAAACGGGCGGATCT TATA AAATCCGTCCGTTTTC TCTTTTGTAAAAAAG TERM 408 246135 - 246160 + F 100 -9.7 -4.94487 | opp_overlap 246135 246155, overlap 246130 TATTCTTGCATAAAA CGGGCGGATCT TATA AAATCCGTCCG TTTTCTCTTTTGTAA TERM 409 246160 - 246135 - f 100 -9.7 -4.3739 | opp_overlap 246135 246130, overlap 246155 TATTCTTGCATAAAA CGGGCGGATCT TATA AAATCCGTCCG TTTTCTCTTTTGTAA rpmI 246366 - 246563 + | 50S ribosomal protein L35 rplT 246631 - 246984 + | 50S ribosomal protein L20 TERM 410 246998 - 246973 - f 70 -4.1 -4.77757 | overlap 246967 246995 GTTGAAAAAGCAAAA TCTGCTCTTTA ATTT TAAAGAATAGA GATTAGGACGCCTTC TERM 411 247004 - 247021 + F 100 -12.7 -5.26316 | opp_overlap 247001 246999 246995 247004 AAAGAATAGAGATTA GGACGCC TTCG GGCGTCC TTTTTTATAGGATGC TERM 412 247021 - 247004 - f 86 -12.7 -2.79106 | opp_overlap 247004, overlap 247001 246999 246995 AAAGAATAGAGATTA GGACGCC TTCG GGCGTCC TTTTTTATAGGATGC APL_0226 247033 - 247569 + | hypothetical protein TERM 413 247765 - 247755 - g 74 -4.6 -4.855 | GAAAAACAAAAACAA CGCG TGG CGCA ACAAATTGAGCCGGA APL_0227 247602 - 247895 + | hypothetical protein APL_0228 249247 - 247952 - | hypothetical protein TERM 414 248111 - 248130 + g 75 -8.6 -3.89215 | overlap 248106 GCCGATGGTTTCATA GTTTTCCG CATT CGGGAAAC TTTCGATTTCTAACG TERM 415 248408 - 248426 + g 81 -5.2 -5.11613 | CAGTAATTTCGCATC CGTTAGCG ACA CGTTATCG TTTTTTAGGTACTGT TERM 416 248835 - 248847 + g 71 -3.3 -5.03314 | opp_overlap 248827, overlap 248836 ATCATAACGCCGATG GTGCG CAC CGCAA TTTTTTCCGGATAGG rluA 249941 - 249291 - | RNA pseudouridine synthase gpmB 249991 - 250623 + | phosphoglycerate mutase/fructose-2, 6-bisphosphatase TERM 417 250641 - 250685 + T 93 -7.3 -5.4756 | opp_overlap 250636 250644 250647, overlap 250644 250647 TTGCAAAAAATCCAA AAATTAGACCGCTTATTTG CGTTGTT CAAATTAGCGGTCTTATTC TTTTTTATTGGGCTT TERM 418 250644 - 250682 + T 93 -9 -4.81306 | opp_overlap 250636 250644 250647, overlap 250641 250647 CAAAAAATCCAAAAA TTAGACCGCTTATTTG CGTTGTT CAAATTAGCGGTCTTA TTCTTTTTTATTGGG TERM 419 250682 - 250644 - T 95 -9 -4.95854 | opp_overlap 250644 250641 250647, overlap 250636 250647 CAAAAAATCCAAAAA TTAGACCGCTTATTTG CGTTGTT CAAATTAGCGGTCTTA TTCTTTTTTATTGGG TERM 420 250679 - 250647 - T 86 -10.7 -3.31103 | opp_overlap 250644 250641 250647, overlap 250636 250644 AAAATCCAAAAATTA GACCGCTTATTTG CGTTGTT CAAATTAGCGGTC TTATTCTTTTTTATT TERM 421 250647 - 250679 + T 100 -10.7 -4.4634 | opp_overlap 250636 250647 250644, overlap 250644 250641 AAAATCCAAAAATTA GACCGCTTATTTG CGTTGTT CAAATTAGCGGTC TTATTCTTTTTTATT APL_0231 251103 - 250690 - | Holliday junction resolvase-like protein APL_0232 251716 - 251156 - | hypothetical protein APL_0233 252447 - 251716 - | hypothetical protein TERM 422 252032 - 252066 + g 80 -2.9 -5.47159 | gap 1, overlap 252034 252035 252036 CGTCCGCATTGTTCG CAAGCGGCAATCGCAA TTTT TTGCCATTGCTG-TAG TTTTTTGTCTTGGCG TERM 423 252036 - 252063 + g 76 -9.2 -3.50491 | overlap 252035 252034 252032 CGCATTGTTCGCAAG CGGCAATCGCAA TTTT TTGCCATTGCTG TAGTTTTTTGTCTTG APL_0234 253212 - 252622 - | putative lipoprotein TERM 424 252987 - 253009 + g 71 -4.2 -4.82154 | overlap 252988 CGACTTCCGGGCTTG AGGTTAAATA AGT TATTTGACCG TTTTTCGTATAACTT bolA 253341 - 253652 + | stress-induced morphogen (activity unknown) TERM 425 253912 - 253923 + T 74 -3 -5.39221 | opp_overlap 253912 CTTGGTTAAGTTAAA GTAA TTAA TTAC TTTTTTAATTATTAT TERM 426 253944 - 253962 + T 100 -11.7 -5.60993 | TAATTATTATTTTCA TCCCCGG TTTTT CCGGGGA TTTTTTTATCCGGCG TERM 427 253984 - 254040 + T 80 -7.3 -4.59489 | opp_overlap 254000, overlap 253987 253996 254000 TATCCGGCGTATTGG CGTTCGATATGAAAAAGCCCGTAACAT CGA ATGCTACGGGCTTGGTTTTATCGGTTG TTTCTTATTTCACTT TERM 428 253987 - 254037 + T 100 -9.8 -4.38503 | opp_overlap 254000, overlap 253984 253996 254000 CCGGCGTATTGGCGT TCGATATGAAAAAGCCCGTAACAT CGA ATGCTACGGGCTTGGTTTTATCGG TTGTTTCTTATTTCA TERM 429 253996 - 254028 + T 82 -7.7 -4.51847 | opp_overlap 254000, overlap 253987 253984 254000 TGGCGTTCGATATGA AAAAGCCCGTAACAT CGA ATGCTACGGGCTTGG TTTTATCGGTTGTTT TERM 430 254000 - 254024 + T 95 -12.9 -3.76789 | opp_overlap 254000, overlap 253996 253987 253984 GTTCGATATGAAAAA GCCCGTAACAT CGA ATGCTACGGGC TTGGTTTTATCGGTT TERM 431 254024 - 254000 - T 100 -15.1 -4.8048 | opp_overlap 253996 253987 253984 254000 GTTCGATATGAAAAA GCCCGTAACAT CGA ATGCTACGGGC TTGGTTTTATCGGTT APL_0236 254419 - 254045 - | putative lipoprotein APL_0237 254747 - 254439 - | hypothetical protein APL_0238 254850 - 255176 + | hypothetical protein TERM 432 255363 - 255353 - g 79 -8.2 -4.19974 | overlap 255354 AAAACGTTTAAGAAA GCGC GTG GCGC AAATTAATAAACTTG TERM 433 256213 - 256238 + G 74 -7.7 -4.0098 | gap 1 CTTTATTACACCACG TTTATGCG-GCG TTA CGTGCGCATAAA TTATTTGAATTAAAC secA 255285 - 258002 + | preprotein translocase subunit SecA TERM 434 258012 - 258060 + F 77 -4.8 -5.18371 | gap 1 GCGTAATTAGTCTAA GCGGTAGTTTTTTC-TGAATTTT TGCA AAATTTCCTGAAAAAATGACCGC TTTTCTTTTATGAGG APL_0240 258132 - 259319 + | TPR repeat-containing protein mutT 259316 - 259714 + | mutator mutT protein TERM 435 259722 - 259743 + F 100 -9.5 -5.39721 | opp_overlap 259718 259722 AAGTTTAAAAATGAA CGGCATTTT ATTA GAAATGCCG TTTTTTATGTCATAA TERM 436 259743 - 259722 - f 79 -8.8 -3.82528 | opp_overlap 259722, overlap 259718 AAGTTTAAAAATGAA CGGCATTT TATTAG AAATGCCG TTTTTTATGTCATAA TERM 437 259854 - 259868 + F 79 -4.3 -5.35365 | opp_overlap 259854, overlap 259866 ACTTTTGATTAATTA TTCAC TTTAT GTGAA TTTTTATTCTGTTTT argC 259949 - 260893 + | N-acetyl-gamma-glutamyl-phosphate reductase argB 260923 - 261777 + | acetylglutamate kinase argD 261791 - 262972 + | acetylornithine aminotransferase TERM 438 263031 - 263057 + F 100 -16 -5.94214 | opp_overlap 263021 263031 TTTAAGACGAACGAA TCCCCTTAAGTG AAT CACTTAGGGGGA TTTTTTTATTATGTT TERM 439 263057 - 263031 - f 95 -13.8 -3.45768 | opp_overlap 263031, overlap 263021 TTTAAGACGAACGAA TCCCCTTAAGTG AAT CACTTAGGGGGA TTTTTTTATTATGTT TERM 440 263213 - 263201 - g 78 -4.1 -5.10029 | overlap 263191 ATGAATGTGAAAAAA TCACA AAT TGCGA TAGTAATAGCCGCAA TERM 441 264041 - 264025 - g 74 -9.5 -3.29649 | ACGCTACGATATTAA TGCCAAA TTA TTTGGCA ACCGTTTCCGCGGTA APL_0245 263186 - 264895 + | transferrin binding protein-like solute binding protein TERM 442 265020 - 264996 - g 73 -5.7 -4.42238 | TTATGCGAAGCAAAA TGAAACGGAAT TAG ATACCGTTACA GTCAAAGCAAAAACG TERM 443 265046 - 265034 - g 77 -4.7 -5.00138 | CAGTCAAAGCAAAAA CGGAG ATA CACCG CCGACAAAACGAAGT TERM 444 265501 - 265479 - g 75 -5.7 -4.7373 | opp_overlap 265479 265486 GTATTCGAGTAAAAA TAAGCAATT TAGCG AATCGCTTA GTTTTGCAGGTCGTT APL_0246 264910 - 267177 + | truncated transferrin-binding protein 1 precursor TERM 445 267715 - 267740 + T 100 -14.9 -5.25803 | opp_overlap 267715 267719 AAGGAATAGATATAA TAAAGGCACTC AACA GAGTGCCTTTA TTTTTTATGAACGTT TERM 446 267740 - 267715 - T 100 -14.9 -3.70636 | opp_overlap 267715, overlap 267719 AAGGAATAGATATAA TAAAGGCACTC AACA GAGTGCCTTTA TTTTTTATGAACGTT TERM 447 267736 - 267719 - T 100 -11.3 -4.45484 | opp_overlap 267715, overlap 267715 AATAGATATAATAAA GGCACTC AACA GAGTGCC TTTATTTTTTATGAA rho 269007 - 267745 - | transcription termination factor Rho TERM 448 269129 - 269113 - R 75 -8.1 -3.76411 | GCAAAATTATCCAAA TTGCAAA TTC TTTGCAA AAATAGACCGCTTAC TERM 449 269165 - 269183 + r 76 -7.4 -4.07568 | opp_overlap 269165 TTTCTAAACGAAAAA TGCCGG CGTTATA CCGGCA TTTTAAAGAAAGAAG TERM 450 269183 - 269165 - R 90 -8.1 -4.98531 | opp_overlap 269165 TTTCTAAACGAAAAA TGCCGGC GTTAT ACCGGCA TTTTAAAGAAAGAAG cysK 270155 - 269205 - | cysteine synthase TERM 451 270341 - 270303 - R 100 -21.3 -5.2422 | opp_overlap 270303 AATCACACTAAAAAA GCGGTCGGATTTTACAA TTTTT TTGCAAAATCCGACCGC TTGTATAGGCTAAAT TERM 452 270303 - 270341 + r 100 -19.1 -3.50572 | opp_overlap 270303 AATCACACTAAAAAA GCGGTCGGATTTTACAA TTTTT TTGCAAAATCCGACCGC TTGTATAGGCTAAAT thrB 271317 - 270367 - | homoserine kinase thrA 273773 - 271317 - | bifunctional aspartokinase I/homeserine dehydrogenase I TERM 453 271771 - 271784 + g 84 -3.8 -5.46706 | TCATCACGCGGATCC GGCT CGGTAA AGCC TTTTTCTTTTGCGAT TERM 454 272006 - 272033 + g 73 -5.6 -4.57581 | opp_overlap 272013, overlap 272008 272011 CTTCACGTAATTCTT GGTAATATCGGT AACT ACCGGTATTGGC TTTCTTGTTTGGGGT TERM 455 273063 - 273044 - G 73 -5.8 -4.44046 | gap 1, overlap 273060 TTGATTCTAAACAAA TCGCTTCAG GCA CT-AAGCGA GGGTCACAAGTATAA TERM 456 273828 - 273843 + H 85 -10.4 -3.44318 | opp_overlap 273828, overlap 273836 TTGGATATAAAAAAA CCCGCT TGCT AGCGGG TTCCGTTTGTTTCTT TERM 457 273843 - 273828 - H 100 -10.4 -5.71712 | opp_overlap 273828 273836 TTGGATATAAAAAAA CCCGCT TGCT AGCGGG TTCCGTTTGTTTCTT TERM 458 274075 - 274087 + H 86 -4.9 -5.72207 | opp_overlap 274075 AGTTTTATCAAGCGA TAGAA AAA TTCTA TTTTTTTGATTTAGA sodA 274183 - 274824 + | manganese superoxide dismutase TERM 459 274902 - 274859 - T 100 -14.8 -4.25681 | opp_overlap 274862, overlap 274862 ATCTAAGCGAATAAA TAAGCGGTCGTTTTTGCAAA TTTT CTTGTAAAAACGACCGCTTT TTATATGAATTATTC TERM 460 274862 - 274899 + T 100 -18 -5.00642 | opp_overlap 274859 274862 TAAGCGAATAAATAA GCGGTCGTTTTTGCAA ATTTTC TTGTAAAAACGACCGC TTTTTATATGAATTA TERM 461 274899 - 274862 - T 100 -16.5 -4.2416 | opp_overlap 274862, overlap 274859 TAAGCGAATAAATAA GCGGTCGTTTTTGCAAA TTTT CTTGTAAAAACGACCGC TTTTTATATGAATTA TERM 462 274943 - 274929 - T 93 -8.6 -4.66163 | opp_overlap 274929 274928 ATTCGTATTCAAAAA TTACCC GTG GGGTAA GTTTGGTAATCAATT alr 276036 - 274912 - | alanine racemase TERM 463 275410 - 275394 - G 77 -6.5 -4.66537 | opp_overlap 275401, overlap 275396 GTTTCCAATATAAAA TACCGCT CGA AGCGGAA ATACTGCGTTCGTGT TERM 464 275408 - 275396 - G 80 -9.1 -3.94773 | opp_overlap 275401, overlap 275394 TTCCAATATAAAATA CCGCT CGA AGCGG AAATACTGCGTTCGT TERM 465 275816 - 275828 + g 86 -9.1 -4.29326 | ATTAATAAAATCTTG CCGGT GTA ACCGG TTTCTTGAATTTCGA TERM 466 276442 - 276425 - g 74 -4 -5.03747 | opp_overlap 276428, overlap 276426 AAATTTTGCAAAAAA TCGGCG GAATCA CGCCGC TTGAATGGCAGGGCG TERM 467 276694 - 276683 - g 74 -4.4 -5.07107 | overlap 276685 TAAATTGGCAAAAAA TAGC GGTC GCTA CGGCTATCAAACAAA TERM 468 277072 - 277057 - g 71 -4.8 -4.74103 | TTCTTAATGGAAAAA TTAATG GCGG CATTAA AACCGAATACCCGAT recD 276157 - 278094 + | exodeoxyribonuclease V alpha chain TERM 469 280237 - 280254 + T 74 -9.1 -3.07291 | opp_overlap 280237 GTCGTAACAAGGTAA CCGTAGG GGAA CCTGCGG TTGGATCACCTCCTT TERM 470 281213 - 281201 - T 72 -6.2 -4.31549 | GAAAAGCGAAAAGAA CCCC GGTGA GGGG AGTGAAATAGAACCT TERM 471 282008 - 281994 - T 71 -5.7 -4.58213 | TAAGTAACGATAAAA CGAGT GAAAA ACTCG TTCGCCGGAAGACCA TERM 472 283712 - 283686 - T 74 -2.2 -5.57729 | AAAGAAGACAAAAAA CGAAAAAATCAG TGA CGGCTTGTTTCG AATTTAAGAAGAAAA TERM 473 283920 - 283945 + T 100 -10.5 -5.25735 | opp_overlap 283920 GAGAGGCGAAGGGAA CCCTGTGGTTA GCGA TAACTACGGGG TTTTTGCTTTTTTAC TERM 474 284192 - 284229 + T 84 -5.6 -5.58074 | opp_overlap 284193 284199, overlap 284193 284199 AGAAATAAGATAGAA AGAAAAACGGCTAGAA GTAAAA TTCTAGCCGTTCTGCA TTTTTTTAGTAATTA TERM 475 284228 - 284193 - T 100 -11.3 -4.30477 | opp_overlap 284192 284193 284199, overlap 284199 GAAATAAGATAGAAA GAAAAACGGCTAGAA GTAAAA TTCTAGCCGTTCTGC ATTTTTTTAGTAATT TERM 476 284193 - 284228 + T 85 -9.1 -3.93218 | opp_overlap 284193 284199, overlap 284192 284199 GAAATAAGATAGAAA GAAAAACGGCTAGAA GTAAAA TTCTAGCCGTTCTGC ATTTTTTTAGTAATT TERM 477 284222 - 284199 - T 100 -11.1 -5.4433 | opp_overlap 284193 284192 284199, overlap 284193 AGATAGAAAGAAAAA CGGCTAGAA GTAAAA TTCTAGCCG TTCTGCATTTTTTTA TERM 478 284199 - 284222 + T 89 -11.1 -3.6185 | opp_overlap 284199 284193, overlap 284193 284192 AGATAGAAAGAAAAA CGGCTAGAA GTAAAA TTCTAGCCG TTCTGCATTTTTTTA pepD 285696 - 284242 - | aminoacyl-histidine dipeptidase TERM 479 285364 - 285339 - G 73 -8.9 -3.54902 | opp_overlap 285354 285355, overlap 285335 285340 CTAGGCAAGAAGCAA GCCCGATGCCG TTAT CGGCACCGAGA GTCGTGCCTTTGGCT TERM 480 285363 - 285340 - G 88 -12.4 -2.72459 | opp_overlap 285354 285355, overlap 285339 285335 TAGGCAAGAAGCAAG CCCGATGCCG TTAT CGGCACCGAG AGTCGTGCCTTTGGC TERM 481 285829 - 285846 + H 91 -2.6 -6.02914 | overlap 285830 ACGCAATTTTTTTAT TCGGTG CCTTGA CACCGC TTTTTTTTATCTAGG gpt 285869 - 286342 + | xanthine-guanine phosphoribosyltransferase TERM 482 286354 - 286384 + F 93 -9.9 -4.21462 | opp_overlap 286354, overlap 286382 GTAATTCGTGAATAA TGGAGAACTGATT AAAAA AATTGGTTCTCCA TTTTCAATGGTAACT gmk 286426 - 287046 + | guanylate kinase TERM 483 287927 - 287943 + G 74 -6.6 -4.28656 | GAATCAAGCGTTACC TACTCG TTATC CGAGTA TTTTAGGTGTTAAAT TERM 484 288085 - 288073 - g 82 -3.3 -5.47159 | CCGCAACAGAAAAAA GTTGG TTC CCGAC AGTTACGCTTGGCGG TERM 485 288401 - 288389 - g 70 -2.7 -4.94902 | TAACTATTATAAAAA TCGTT ATG AACAA GGCGTATCCGAGTTC APL_0257 287148 - 288542 + | outer membrane protein TERM 486 288582 - 288561 - T 95 -8.8 -5.4505 | opp_overlap 288561 TGCGCTAACAAAAAA GCACGAAA TGAAAG TTTCGTGC TTTTTTACTATTTTT TERM 487 288561 - 288582 + T 100 -9.5 -5.38348 | opp_overlap 288561 TGCGCTAACAAAAAA GCACGAAAT GAAA GTTTCGTGC TTTTTTACTATTTTT APL_0258 288886 - 288590 - | hypothetical protein APL_0259 289313 - 288879 - | oligoketide cyclase/lipid transport protein modC 290416 - 289361 - | molybdate transporter ATP-binding protein modB 291109 - 290420 - | molybdate ABC transporter permease protein TERM 488 291158 - 291138 - R 70 -4 -4.95547 | overlap 291133 TTGATAAGAAGAAAA GGAATAAC TTTTG GCTATCCC TTTTGTAAGATTAAT modA 291927 - 291169 - | molybdate-binding periplasmic protein precursor APL_0263 292784 - 292023 - | putative ABC transport system permease TERM 489 292258 - 292235 - G 82 -4.5 -5.28755 | AAATAGAGTAAAAAA CACCGCCTA AATAAG TGAGCGGTG TAAGTACGAAAGTCG APL_0264 293696 - 292788 - | putative ABC transporter ATP-binding protein TERM 490 292971 - 292982 + g 85 -2.2 -5.76949 | TTTTATTTCAAGCGG TTGG TTTT CCGA TTTTTTTTGCAAATC dnaX 295762 - 293696 - | DNA polymerase III subunits gamma and tau TERM 491 295410 - 295420 + g 71 -6.8 -4.20025 | opp_overlap 295407, overlap 295407 TAAACTTTAAAGCGT CCGA CGG TCGG TTTGTATTGAACGTT apt 296350 - 295811 - | adenine phosphoribosyltransferase TERM 492 296145 - 296120 - G 74 -6.9 -4.28323 | gap 1, overlap 296137 ACGAACTAAGACAAA CGGTA-CGCCTA ATG CAAGCGCTACCG GTGCGCCGAAGATAA TERM 493 296846 - 296832 - g 70 -5.7 -4.2558 | opp_overlap 296832 GATTTTTGACCAAAA CCAAC AGCTG GTTGG TGCTTTATGTATCAA APL_0267 296551 - 297183 + | hypothetical protein APL_0268 297183 - 297545 + | putative translation initiation inhibitor thrCA 297556 - 298650 + | putative threonine synthase APL_0270 298665 - 299156 + | hypothetical protein TERM 494 299252 - 299232 - T 86 -5.4 -5.69023 | opp_overlap 299232 AAAATACGAAAAAAA GACCGC TTGTTTTTG GCGGTC TTTATCAATCTAATC APL_0271 300022 - 299267 - | putative chelated iron transport system ATP-binding protein TERM 495 299988 - 299954 - G 100 -13 -3.51365 | opp_overlap 299955, overlap 299955 299961 GGATACGTCATATAA GGCTAAATGCCCGTTA TTA TAACGGACACTTAGCT TTTCAACGGAAATAG TERM 496 299987 - 299955 - G 100 -16.5 -2.70498 | opp_overlap 299955, overlap 299954 299961 GATACGTCATATAAG GCTAAATGCCCGTTA TTA TAACGGACACTTAGC TTTTCAACGGAAATA TERM 497 299955 - 299987 + g 100 -12.1 -4.07885 | opp_overlap 299955 299954 299961 GATACGTCATATAAG GCTAAATGCCCGTTA TTA TAACGGACACTTAGC TTTTCAACGGAAATA TERM 498 299981 - 299961 - G 82 -10.5 -3.70811 | opp_overlap 299955, overlap 299955 299954 TCATATAAGGCTAAA TGCCCGTTA TTA TAACGGACA CTTAGCTTTTCAACG yfeA 300920 - 300024 - | iron (chelated) ABC transporter, periplasmic-binding protein APL_0273 301322 - 300987 - | putative dissimilatory sulfite reductase TERM 499 301350 - 301333 - R 100 -11.3 -5.58522 | opp_overlap 301333 TACATAAAATAAAAA GTGCCAC GGGT GTGGCAC TTACTCTCTTAAATT TERM 500 301333 - 301350 + r 89 -11.3 -3.38609 | opp_overlap 301333 TACATAAAATAAAAA GTGCCAC GGGT GTGGCAC TTACTCTCTTAAATT APL_0274 302040 - 301375 - | hypothetical protein pgsA 302222 - 302773 + | phosphatidylglycerophosphate synthase TERM 501 302814 - 302798 - f 89 -10.9 -3.65112 | opp_overlap 302798, overlap 302790 ACCGAAACGATATAA GCGAGAT AAT ATCTCGC TTTTTTTATGCGTAA TERM 502 302798 - 302814 + F 100 -10.9 -5.64274 | opp_overlap 302798 302790 ACCGAAACGATATAA GCGAGAT AAT ATCTCGC TTTTTTTATGCGTAA TERM 503 304100 - 304090 - g 71 -6.8 -4.15044 | CTTGCCGGTAATAAA TCGG TAT CCGA TAAAAGATTAAATCC TERM 504 304125 - 304113 - g 76 -7.7 -4.10958 | opp_overlap 304113 304109 CGATAAAAGATTAAA TCCGA GTT TCGGA TTGATTTGGGACATT TERM 505 304656 - 304643 - g 71 -4.5 -4.58303 | gap 1, overlap 304644 304645 CTAAAGAGTATAAAA CGGGCG CTG CGC-CG AAAGTCGAAACGAGA frpB 302893 - 304863 + | iron-regulated outer membrane protein B TERM 506 304912 - 304893 - f 78 -7.8 -4.12599 | opp_overlap 304893 AATAATTTTGCAAAA GCGGTTGT TTTT ACGACCGC TTTTTGTTTATGCAC TERM 507 304893 - 304912 + F 100 -10 -5.38054 | opp_overlap 304893 AATAATTTTGCAAAA GCGGTTGT TTTT ACGACCGC TTTTTGTTTATGCAC uvrC 305016 - 306848 + | excinuclease ABC subunit C TERM 508 306896 - 306853 - f 100 -21.4 -2.56273 | opp_overlap 306856, overlap 306856 AGCATAGCTAAGTGA CAAGCGGTCGAATTTACA GCATTTTT TGTAAATTCGACCGCTTG TAAATAGAGATGAGA TERM 509 306893 - 306856 - f 100 -17.3 -3.43117 | opp_overlap 306856, overlap 306853 ATAGCTAAGTGACAA GCGGTCGAATTTACA GCATTTTT TGTAAATTCGACCGC TTGTAAATAGAGATG TERM 510 306856 - 306893 + F 100 -18 -3.35996 | opp_overlap 306853 306856 ATAGCTAAGTGACAA GCGGTCGAATTTACAG CATTTT TTGTAAATTCGACCGC TTGTAAATAGAGATG APL_0278 306917 - 307669 + | putative Mg-dependent deoxyribonuclease TERM 511 307784 - 307760 - T 93 -13.7 -3.23538 | opp_overlap 307762, overlap 307763 ATAATTCACTATTAA TAAGGGCTAAC GCG GTTAGCCCCTA TATAAAAATGTGAGG TERM 512 307762 - 307782 + T 76 -9.7 -2.89191 | opp_overlap 307760 307763 AATTCACTATTAATA AGGGCTAAC GCG GTTAGCCCC TATATAAAAATGTGA TERM 513 307781 - 307763 - T 95 -13.2 -3.75292 | opp_overlap 307762, overlap 307760 ATTCACTATTAATAA GGGCTAAC GCG GTTAGCCC CTATATAAAAATGTG rep 309824 - 307806 - | ATP-dependent DNA helicase TERM 514 310836 - 310810 - g 76 -8 -4.09739 | opp_overlap 310810 TGAACGGCGGTAAAA TTGCACAAGACG GTA CGCCTCGTGAAA TTTATGAAGAGCCTA potA 310158 - 311273 + | putrescine/spermidine ABC transporter ATPase protein TERM 515 311538 - 311574 + G 70 -3.8 -4.8083 | gap 1, opp_overlap 311547, overlap 311541 311547 GTTTGCATTTATTAT TGCCAAAATGCCGGCGA AAAT TCGCCCG-ATTTTGTTA TTTTTAGTCGTATTG TERM 516 311541 - 311571 + G 82 -7.7 -4.49314 | gap 1, opp_overlap 311547, overlap 311538 311547 TGCATTTATTATTGC CAAAATGCCGGCGA AAAT TCGCCCG-ATTTTG TTATTTTTAGTCGTA TERM 517 311547 - 311566 + G 75 -3.4 -5.16681 | opp_overlap 311547, overlap 311541 311538 TATTATTGCCAAAAT GCCGGCGA AAAT TCGCCCGA TTTTGTTATTTTTAG potB 311260 - 312126 + | spermidine/putrescine ABC transporter membrane protein potC 312153 - 312893 + | spermidine/putrescine ABC transporter membrane protein TERM 518 312911 - 312932 + F 100 -10.9 -5.40072 | opp_overlap 312909 312911 TAATTTGATTAAACA TAGCTCGCT GATT AGCGGGCTA TTTTTTTGCAAAAAA TERM 519 312932 - 312911 - f 75 -8.7 -3.46534 | opp_overlap 312911, overlap 312909 TAATTTGATTAAACA TAGCTCGCT GATT AGCGGGCTA TTTTTTTGCAAAAAA TERM 520 313601 - 313587 - g 70 -5.6 -4.31837 | AAGAAAGTGAATAAA GCGGGT GCA ACCAGC GAACAATTAATTCGT ruvA 313035 - 313640 + | Holliday junction DNA helicase motor protein ruvB 313779 - 314663 + | Holliday junction DNA helicase B TERM 521 314710 - 314667 - T 73 -8.4 -3.53452 | opp_overlap 314667 314706, overlap 314665 AAATTAGATTAAATA CAAGCGGTTGTTTTTG TAAGATTTTAGG CAAAAATAACCGCTTG TTTTCTAAGCTATTT TERM 522 314667 - 314710 + T 100 -11.3 -4.43221 | opp_overlap 314667 314665, overlap 314706 AAATTAGATTAAATA CAAGCGGTTGTTTTTGT AAGATTTTAG GCAAAAATAACCGCTTG TTTTCTAAGCTATTT ubiG 315424 - 314720 - | 3-demethylubiquinone-9 3-methyltransferase TERM 523 316730 - 316717 - g 70 -8.1 -3.57561 | TTTGAATTGCGTAAA GCACG TGAA CGTGC GCATATCTTAGAAGG gyrA 315604 - 318294 + | DNA gyrase subunit A TERM 524 318359 - 318320 - f 100 -16.6 -3.96449 | opp_overlap 318320, overlap 318340 TAAGACCCTAAACAA GCGGTCGGATTTTGGTAA AATT TTGCAAAAATCCGACCGC TTTTGATTATAAGCA TERM 525 318320 - 318359 + F 100 -18.8 -4.48987 | opp_overlap 318320 318340 TAAGACCCTAAACAA GCGGTCGGATTTTGGTAA AATT TTGCAAAAATCCGACCGC TTTTGATTATAAGCA TERM 526 319128 - 319108 - f 74 -5.5 -4.67173 | TAAGCGAAAAAACAA TTTGATGAT CAC ATCATCGAA GAAGGGTTTTTCGGT TERM 527 320138 - 320116 - g 76 -10.7 -2.54702 | AGAGAGCGGAATTGA GTTGTACGA AAAAA TCGTACAAC TGAAAATGCAGTCTT APL_0289 319940 - 320260 + | hypothetical protein TERM 528 320555 - 320576 + G 71 -4.5 -4.73092 | opp_overlap 320551, overlap 320570 TGATTTTAACACTCC TGTTTTAAC AGCA GGTAAAACA TTTATTTTGGGTTAT TERM 529 320898 - 320872 - g 90 -6 -5.52096 | AAATTCAAGAAAAAA TCGTAAAAACAC TTG ACATTTTTACGA AGCTGGAAGCTGAAT APL_0290 320427 - 321521 + | putative Type I restriction enzyme EcoR124II specificity protein TERM 530 324777 - 324787 + G 73 -5.4 -4.72986 | GCAGGCTTTTTCTCG TACG AAT CGTA TTTTTGATGCAACTA TERM 531 324811 - 324825 + G 75 -8.6 -3.8901 | GCAACTAAAACATTT GGTAAC ATT GTTACC TTTCGTGATTTGGAG TERM 532 325731 - 325720 - g 82 -3 -5.55769 | opp_overlap 325720 325719 CGCCATAAGAAAAAA GAAA CGGT TTTC CAAAAAATTGTTTCA APL_0293 322648 - 325785 + | putative type I site-specific restriction-modification system, R (restriction) subunit uupA 325804 - 327747 + | ABC transporter ATPase component TERM 533 328434 - 328459 + G 70 -7.5 -3.8374 | TGCGCAAACGGTTTC GGTGCGGTAAC GATG GTAACCGCAAC TTTCAGCTTTTTTGC APL_0295 327747 - 328511 + | hypothetical protein TERM 534 328577 - 328545 - T 100 -17.3 -4.10453 | opp_overlap 328550, overlap 328550 TAAAGTTTTGGAAAA TAAAAGCCTCTGAAA AAT CTTCAGAGGCTTTTA TATAAATGAATATTA TERM 535 328572 - 328550 - T 100 -12.8 -5.07652 | opp_overlap 328550, overlap 328545 TTTTGGAAAATAAAA GCCTCTGAAA AAT CTTCAGAGGC TTTTATATAAATGAA TERM 536 328550 - 328572 + T 100 -12.1 -4.55287 | opp_overlap 328545 328550 TTTTGGAAAATAAAA GCCTCTGAA AAATC TTCAGAGGC TTTTATATAAATGAA APL_0296 328922 - 328590 - | hypothetical protein cydA 329378 - 330928 + | cytochrome oxidase subunit 1 cydB 330942 - 332078 + | cytochrome oxidase subunit 2 TERM 537 332253 - 332229 - f 87 -10.1 -3.9093 | opp_overlap 332229 332233, overlap 332233 TCTATGACATAACAA GAAAGGGCT GGTTAAA AGCCCTTTC TTTCATATTGGCTTG TERM 538 332229 - 332253 + F 87 -10.1 -3.94853 | opp_overlap 332229 332233, overlap 332233 TCTATGACATAACAA GAAAGGGCT GGTTAAA AGCCCTTTC TTTCATATTGGCTTG TERM 539 332435 - 332453 + F 88 -7.4 -4.93547 | overlap 332438 ACGGTTTTCCTTCCT CTAGTAGG CTA CCTACTTG TTTTTAGTTCGTTAG TERM 540 332438 - 332450 + F 82 -7.7 -4.54681 | overlap 332435 GTTTTCCTTCCTCTA GTAGG CTA CCTAC TTGTTTTTAGTTCGT TERM 541 332492 - 332510 + F 82 -8.9 -4.07533 | opp_overlap 332494, overlap 332484 ATTTCTTTACGATTA TATGGGC AATAA GCCCATA TTATTCTATTATTTT TERM 542 332596 - 332612 + F 95 -8.7 -5.0925 | opp_overlap 332596 ATAGTCTGCAATTTA CGCCTAA TTT TTGGGCG TTTTTCATTTTGGCG APL_0299 332646 - 333035 + | hypothetical protein tolQ 333070 - 333750 + | colicin transport protein TolQ TERM 543 333777 - 333798 + F 79 -9.5 -3.49653 | opp_overlap 333777 333774 333779 GAGTAATCATAAGTA GATCCGAAT ATAT GTTCGGATC TTATATCCCACTAAT tolR 333829 - 334269 + | colicin uptake protein TolR tolA 334285 - 335580 + | cell envelope integrity inner membrane protein TolA TERM 544 336119 - 336103 - g 71 -2.3 -5.20333 | CATTCAGAACAAAAA TTGCA TATGTAG TGCAA CGTGGTGTATCATCA tolB 335598 - 336878 + | translocation protein TolB precursor palA 336904 - 337374 + | outer membrane protein precursor PalA TERM 545 337401 - 337426 + F 100 -12.7 -4.55295 | opp_overlap 337401 337405, overlap 337405 TTACTGAATAGACAA TGAAGCCCTGA TTTT TCAGGGCTTTA TTTCTTTATAAGCGG TERM 546 337426 - 337401 - f 86 -10.5 -3.69482 | opp_overlap 337401 337405, overlap 337405 TTACTGAATAGACAA TGAAGCCCTGA TTTT TCAGGGCTTTA TTTCTTTATAAGCGG TERM 547 337422 - 337405 - f 90 -11.3 -3.54503 | opp_overlap 337401 337405, overlap 337401 TGAATAGACAATGAA GCCCTGA TTTT TCAGGGC TTTATTTCTTTATAA TERM 548 337405 - 337422 + F 100 -11.3 -4.83246 | opp_overlap 337405 337401, overlap 337401 TGAATAGACAATGAA GCCCTGA TTTT TCAGGGC TTTATTTCTTTATAA APL_0305 337552 - 338358 + | hypothetical protein TERM 549 338992 - 339003 + G 70 -3.6 -4.83615 | opp_overlap 338991, overlap 338991 338979 GGCGGCGCAACAATT CCGT TCCG GCGG TTTTTATCAACAATC djlA 338438 - 339298 + | DNA-J like membrane chaperone protein TERM 550 339309 - 339355 + F 93 -8.8 -4.66609 | opp_overlap 339308 339333, overlap 339313 AATAATAAAAACATC TCAAGCGGTCGTTTTTGGTAAA AAT TTTGCAAAAATCGACCGCTTAC TTTTTGAATCGAATA TERM 551 339313 - 339351 + F 100 -14 -3.83042 | opp_overlap 339308 339333, overlap 339309 ATAAAAACATCTCAA GCGGTCGTTTTTGGTAAA AAT TTTGCAAAAATCGACCGC TTACTTTTTGAATCG dusC 339383 - 340345 + | tRNA-dihydrouridine synthase C APL_0308 340397 - 341443 + | hypothetical protein TERM 552 341538 - 341495 - T 100 -19.9 -4.56914 | opp_overlap 341495 341498, overlap 341498 GTATGGAAATGAAAA TAAGCGGTAGGATTTGCAA AAAAAG TTGCAAATCCTACCGCTTG TTATTTGGAATTTCC TERM 553 341495 - 341538 + T 100 -22.1 -3.98804 | opp_overlap 341495 341498, overlap 341498 GTATGGAAATGAAAA TAAGCGGTAGGATTTGCAA AAAAAG TTGCAAATCCTACCGCTTG TTATTTGGAATTTCC TERM 554 341535 - 341498 - T 100 -21.6 -4.38472 | opp_overlap 341495 341498, overlap 341495 TGGAAATGAAAATAA GCGGTAGGATTTGCAA AAAAAG TTGCAAATCCTACCGC TTGTTATTTGGAATT TERM 555 341498 - 341535 + T 100 -21.6 -4.1023 | opp_overlap 341498 341495, overlap 341495 TGGAAATGAAAATAA GCGGTAGGATTTGCAA AAAAAG TTGCAAATCCTACCGC TTGTTATTTGGAATT TERM 556 341581 - 341603 + T 73 -8.4 -3.55444 | opp_overlap 341586, overlap 341582 GCTGCATTCTGCTTA ACCTAGTACG GAT CGTGCTAGGA TTTCGGAAATACGCC TERM 557 341582 - 341602 + T 84 -11.9 -2.73124 | opp_overlap 341586, overlap 341581 CTGCATTCTGCTTAA CCTAGTACG GAT CGTGCTAGG ATTTCGGAAATACGC yheS 343547 - 341631 - | putative ABC transporter ATP-binding protein YheS TERM 558 341964 - 341979 + g 71 -4 -4.84642 | gap 1 ATTTCCTGAATTTTT TGCAGCT TCC AGC-GCA TTTTGTTCGTTTAGC TERM 559 344083 - 344098 + H 100 -10.4 -4.2408 | opp_overlap 344083, overlap 344077 ATTAGATATTTAAAA GGGCGT ATTT ACGCCC TTTATCGTTTTATAC TERM 560 344098 - 344083 - H 100 -10.4 -4.26589 | opp_overlap 344077 344083 ATTAGATATTTAAAA GGGCGT ATTT ACGCCC TTTATCGTTTTATAC TERM 561 344352 - 344376 + G 71 -10.1 -2.70354 | overlap 344350 344350 TCGAGCGTTTAATCG TTGCCGGTAAA TCG TTTGCCGGTAA TCCGTTTATCGGCGA TERM 562 344816 - 344834 + G 71 -8.8 -3.34517 | overlap 344814 TTGGATTTTGGTATT CTACCGGA TGA TCCGGCAG TGTTTGAACAAACAT moeA 344138 - 345379 + | molybdopterin biosynthesis protein MoeA moeB 345389 - 346135 + | molybdopterin biosynthesis protein MoeB TERM 563 346187 - 346210 + T 70 -4.6 -4.71318 | opp_overlap 346175, overlap 346189 346190 TTAGGTTATAGCATT TGACGCTAAA ACGG TTTAGCGATA TTATTTTTTCGTATT TERM 564 346419 - 346391 - T 100 -17.6 -5.73339 | opp_overlap 346391 AGAATTAGAAAAAAA GAAACCCCGTAG GTTTT CTACGGGGTTTC TTTTTTTCTATATCT TERM 565 346391 - 346419 + T 100 -18.3 -5.77988 | opp_overlap 346391 AGAATTAGAAAAAAA GAAACCCCGTAGG TTT TCTACGGGGTTTC TTTTTTTCTATATCT rumA 347857 - 346529 - | 23S rRNA 5-methyluridine methyltransferase TERM 566 347821 - 347833 + g 73 -5.5 -4.59773 | CCGATTTTTTTGCTT GCTGT TTT GCAGC TTTTTCAGAGTAGAA TERM 567 347926 - 347940 + G 70 -2.8 -5.02074 | opp_overlap 347939, overlap 347927 AAAGATGATTTCCAA TGTTTG GAC CGAACG TTTTTTGGCGGATAA APL_0313 347915 - 349240 + | deoxyguanosinetriphosphate triphosphohydrolase-like protein TERM 568 349290 - 349309 + F 100 -10.8 -5.5112 | TTGTTTATTCGTTAG CCGCTTTA TCCG TAAAGCGG TTTTTTCTTGATGAA TERM 569 352061 - 352045 - g 73 -3.7 -4.91429 | overlap 352035 AAATGGCAAATAAAA TTGCG AAAATGG CGCAA GCGGATATTAAAAAA hepA 349416 - 352325 + | ATP-dependent helicase HepA TERM 570 352974 - 353023 + G 72 -6.5 -4.35044 | overlap 352977 TTAGGGCATCCGATT CTCGGCGATAAATTTTATGCTAG TCCG TTAGCTAAAAGTTTATCGCCTCG TTTGTGTTTGCATGC TERM 571 352977 - 353020 + G 79 -11.2 -3.15228 | overlap 352974 GGGCATCCGATTCTC GGCGATAAATTTTATGCTAG TCCG TTAGCTAAAAGTTTATCGCC TCGTTTGTGTTTGCA rluA 352395 - 353108 + | ribosomal large subunit pseudouridine synthase A TERM 572 353255 - 353277 + T 89 -7.7 -5.24129 | overlap 353256 TCATTCCTAATATAT TGGCTAGGA TTTAT TCCTGGCCG TTTTTTATGCCAAAC TERM 573 353256 - 353276 + T 79 -9 -3.73995 | overlap 353255 CATTCCTAATATATT GGCTAGGA TTTAT TCCTGGCC GTTTTTTATGCCAAA ampD 353852 - 353304 - | N-acetyl-anhydromuranmyl-L-alanine amidase yhiR 353973 - 354815 + | hypothetical protein TERM 574 354994 - 355014 + G 82 -7.6 -4.49556 | opp_overlap 354981 354994 ATCAGGCAGAAAAAG CCCGTATT TCTTT AATGCGGG TTTATTTAATACCGG pyrE 354902 - 355543 + | orotate phosphoribosyltransferase APL_0319 355682 - 356770 + | hypothetical protein TERM 575 356824 - 356801 - T 72 -8.3 -3.36719 | opp_overlap 356801, overlap 356800 ATAACGAGATAAAAG TGAATTAGG TGCAAC CCTAATTCA TTTTTTTGTTACTTA TERM 576 356801 - 356824 + T 100 -8.3 -5.87996 | opp_overlap 356801 356800 ATAACGAGATAAAAG TGAATTAGG TGCAAC CCTAATTCA TTTTTTTGTTACTTA metC 358037 - 356847 - | cystathionine beta-lyase TERM 577 356923 - 356939 + g 70 -2.9 -4.94058 | overlap 356924 CCGACGTGAATACGG ATCAGTG TGC CGCTGAG TTTTCTTTCGATTGC TERM 578 358105 - 358066 - R 100 -14.4 -5.29782 | opp_overlap 358057 358066 TATAGTTATAAAAAA GCGGTCGGATTTCAGCAA AATT TTGCAAAAATTCGACCGC TTGTAAGATTATCTG TERM 579 358066 - 358105 + r 100 -14.4 -3.39005 | opp_overlap 358066, overlap 358057 TATAGTTATAAAAAA GCGGTCGGATTTCAGCAA AATT TTGCAAAAATTCGACCGC TTGTAAGATTATCTG dsbB 358653 - 358114 - | disulfide bond formation protein B TERM 580 358586 - 358566 - G 91 -8.3 -4.68908 | overlap 358568 CGTATTGAAAATAAA TGGCACTTG CTT CAAGTGCGA AAGCAACAAAAGCAA TERM 581 358584 - 358568 - G 76 -10.9 -2.6365 | overlap 358566 TATTGAAAATAAATG GCACTTG CTT CAAGTGC GAAAGCAACAAAAGC TERM 582 358740 - 358720 - R 93 -8.3 -5.40072 | opp_overlap 358720 GTTTTCGTAAAAAAA TCTCCCC ACTTTTA GGGGAGA TTCTTTGAATTATCG TERM 583 358720 - 358740 + r 79 -8.3 -4.03167 | opp_overlap 358720 GTTTTCGTAAAAAAA TCTCCCC ACTTTTA GGGGAGA TTCTTTGAATTATCG nhaB 360291 - 358750 - | sodium/proton antiporter TERM 584 359726 - 359738 + g 77 -3.5 -5.2189 | TGTTCGAGAATTTCT TTATT CGT AATAA TTTTTTCGTCATTAC TERM 585 360707 - 360697 - g 71 -8.2 -3.5393 | ATGACGTGTGGGAAA CGGC AGG GCCG AATATAATCAGCACG fadR 360456 - 361184 + | fatty acid metabolism regulator TERM 586 361563 - 361544 - g 76 -7.8 -4.23781 | overlap 361539 361559 TCGATTAAAACGAAA CGCGGTGT AATT AAACCGCG CGGCGAACACCAACA TERM 587 361780 - 361742 - g 73 -5.4 -4.58283 | opp_overlap 361730, overlap 361745 GAAGCGGGTGAAAAA TTAGGTTTTTTACCCG GTGATCT CGGGCAAAAAATCGAA CCCTATTTAAGACCG phoH 361193 - 362263 + | PhoH-like protein TERM 588 362268 - 362301 + T 93 -12.6 -3.48924 | opp_overlap 362275, overlap 362275 AACAACTTTAAAATT GAAAAAAGCAGCGT TTTTAT ACGCTGCTTTTTAC TTATATCCAACCTAA TERM 589 362294 - 362275 - T 100 -9.3 -5.2696 | opp_overlap 362268 362275 TTAAAATTGAAAAAA GCAGCGT TTTTAT ACGCTGC TTTTTACTTATATCC TERM 590 362275 - 362294 + T 100 -9.3 -4.96646 | opp_overlap 362275, overlap 362268 TTAAAATTGAAAAAA GCAGCGT TTTTAT ACGCTGC TTTTTACTTATATCC APL_0325 363279 - 362302 - | hypothetical protein TERM 591 362572 - 362585 + g 70 -8.1 -3.60475 | opp_overlap 362568 CGCATAAAGCACCAC GCGAG TGAG CTCGC TTTCCGCCGTTTGTT TERM 592 363091 - 363101 + g 79 -6.8 -4.60924 | opp_overlap 363091, overlap 363080 AAGATCTTTGGAATA GTCC AAC GGAC TTTTTACCACATTTA TERM 593 363205 - 363190 - G 74 -7.6 -3.91897 | GTCGTCATCCACAAA TTTGCG ACGG CGCAAA AAAATCCCTAATAAC TERM 594 363303 - 363347 + r 72 -9.5 -2.70932 | opp_overlap 363303 363306, overlap 363306 TCCCGAGTAAAAAAA TAAGCGGTCAAATTTGCAAAA TTT TTTTACAAATTCAACCGCTTG TAATTAAAGCCCCGC TERM 595 363347 - 363303 - R 100 -13.9 -5.52384 | opp_overlap 363303 363306, overlap 363306 TCCCGAGTAAAAAAA TAAGCGGTCAAATTTGCAAAA TTT TTTTACAAATTCAACCGCTTG TAATTAAAGCCCCGC TERM 596 363306 - 363344 + r 75 -9 -3.50853 | opp_overlap 363303 363306, overlap 363303 CGAGTAAAAAAATAA GCGGTCAAATTTGCAAAA TTT TTTTACAAATTCAACCGC TTGTAATTAAAGCCC TERM 597 363344 - 363306 - R 100 -15.6 -4.8487 | opp_overlap 363306 363303, overlap 363303 CGAGTAAAAAAATAA GCGGTCAAATTTGCAAAA TTT TTTTACAAATTCAACCGC TTGTAATTAAAGCCC prfB 364256 - 363351 - | peptide chain release factor 2 TERM 598 365434 - 365414 - g 88 -9.8 -4.15044 | GCCGGGCGGAACAAA CCGTAACT TTGAC AGTTACGG GCATCTAATTTCAGC selD 364716 - 365633 + | selenide, water dikinase mutT 365638 - 366093 + | MutT/NUDIX family NTP pyrophosphohydrolase TERM 599 367200 - 367226 + G 100 -12.4 -3.74238 | overlap 367192 ACTGTTTTCTTGCGA TTTCTTACCGCT ACA AGCGGTCAGAAA TTTAGGCTTATTTGC APL_0329 366103 - 367302 + | 2-octaprenyl-6-methoxyphenol hydroxylase TERM 600 367332 - 367306 - T 79 -9.5 -3.3761 | opp_overlap 367311, overlap 367311 GGTTGGCAATAAAAT TAAAAGGACGC ACTGG GCGTCCTTTTT TATAGTTGATATTTT TERM 601 367327 - 367311 - T 100 -9.4 -4.78029 | opp_overlap 367311, overlap 367306 GCAATAAAATTAAAA GGACGC ACTGG GCGTCC TTTTTTATAGTTGAT TERM 602 367311 - 367327 + T 100 -9.4 -5.38249 | opp_overlap 367311 367306 GCAATAAAATTAAAA GGACGC ACTGG GCGTCC TTTTTTATAGTTGAT APL_0330 367808 - 367332 - | hypothetical protein TERM 603 367854 - 367835 - R 100 -10 -4.9792 | TATTGGAGATAAAAA CGGCTAGA AAAT CCTAGCCG CCAAGTTATACTATT hlp 368542 - 367865 - | putative lipoprotein TERM 604 368571 - 368594 + r 100 -9.7 -4.57063 | opp_overlap 368571 TATGATGTGGAAAAA GGTTAGAAC CTTTCC GTTCTAACC TTTGTTATATTTTAA TERM 605 368594 - 368571 - R 100 -9.7 -4.60487 | opp_overlap 368571 TATGATGTGGAAAAA GGTTAGAAC CTTTCC GTTCTAACC TTTGTTATATTTTAA hlpB 369102 - 368623 - | lipoprotein HlpB visC 370383 - 369238 - | putative monooxygenase family protein APL_0334 371367 - 370507 - | hypothetical protein ptsN 371898 - 371386 - | PTS system, nitrogen regulatory IIA-like protein yhgB 372673 - 371948 - | putative ABC transporter ATP-binding protein TERM 606 372103 - 372121 + g 70 -6 -4.27584 | opp_overlap 372103 TGTGATCGGTAATGA GAACGC CTAATCC GCGTTC TTTTAAATTCACGAT APL_0337 373186 - 372683 - | hypothetical protein TERM 607 372934 - 372958 + g 71 -2.2 -5.09173 | gap 2 GTTGGAAAGTGACCG GAGAACCGCTTG CTT CGAG-GG-TCTC TTTTTTGCCCTCTTG APL_0338 373807 - 373211 - | hypothetical protein TERM 608 373386 - 373416 + g 71 -2 -5.24129 | opp_overlap 373393, overlap 373393 GAAATATCTTGCGTA TTTAAATCGATA CGAAGTT TATCGGTTTCAA TTTTTTGTAAACGCG TERM 609 373916 - 373946 + r 100 -11.9 -5.25656 | opp_overlap 373916 AAACTTTCAGTGAAA TCAGACCGCTTGC TTAAC GTAAGCGGTCCGA TTTTTTCGTAATTTT TERM 610 373946 - 373916 - R 91 -11.9 -3.66095 | opp_overlap 373916 AAACTTTCAGTGAAA TCAGACCGCTTGC TTAAC GTAAGCGGTCCGA TTTTTTCGTAATTTT pepC 376606 - 373967 - | phosphoenolpyruvate carboxylase TERM 611 376802 - 376747 - R 100 -13 -5.95539 | gap 1, opp_overlap 376747 376750, overlap 376750 376796 TTTTAAATAAAAAAA TAAGCGGTTAAATTTTGGAA-GTTTTT TGC AAAGACTTTCCGAAATTTAACCGCTTG TTATCGGCTTAAAAG TERM 612 376747 - 376802 + r 100 -19.6 -3.36492 | gap 1, opp_overlap 376747 376750 376796, overlap 376750 TTTTAAATAAAAAAA TAAGCGGTTAAATTTTGG-AAGTTTTT TGC AAAGACTTTCCGAAATTTAACCGCTTG TTATCGGCTTAAAAG TERM 613 376799 - 376750 - R 100 -14.7 -5.01858 | gap 1, opp_overlap 376747 376750, overlap 376747 376796 TAAATAAAAAAATAA GCGGTTAAATTTTGGAA-GTTTTT TGC AAAGACTTTCCGAAATTTAACCGC TTGTTATCGGCTTAA TERM 614 376750 - 376799 + r 100 -19.1 -3.82191 | gap 1, opp_overlap 376750 376747 376796, overlap 376747 TAAATAAAAAAATAA GCGGTTAAATTTTGG-AAGTTTTT TGC AAAGACTTTCCGAAATTTAACCGC TTGTTATCGGCTTAA APL_0340 377660 - 376821 - | hypothetical protein APL_0341 378106 - 377657 - | hypothetical protein TERM 615 378076 - 378043 - G 75 -9 -3.71649 | gap 1, opp_overlap 378043 GTTCTAAATGTGAAA TTGCCTGTTCGATTC GTTGA GTATCGA-CAGGCAA TTTGTTCGAAAGAAA TERM 616 378043 - 378076 + g 83 -9 -4.15044 | gap 1, opp_overlap 378043 GTTCTAAATGTGAAA TTGCCTGTTCGATTC GTTGA GTATCGA-CAGGCAA TTTGTTCGAAAGAAA TERM 617 378164 - 378121 - R 91 -12.7 -3.21416 | gap 1, opp_overlap 378129 378130, overlap 378130 378132 TAGCGTTACCACTAA CACGGAAAACACGGAA-GAT TTCCG ATCATTCCGTGCTTTTCGTG GTAAGAGATTAATTA TERM 618 378155 - 378130 - R 78 -7 -4.29325 | gap 1, opp_overlap 378129 378130, overlap 378121 378132 CACTAACACGGAAAA CACGGAA-GAT TTCCG ATCATTCCGTG CTTTTCGTGGTAAGA TERM 619 378144 - 378132 - R 73 -7.7 -3.741 | opp_overlap 378130 378129, overlap 378130 378121 CTAACACGGAAAACA CGGAA GAT TTCCG ATCATTCCGTGCTTT APL_0342 378733 - 378173 - | hypothetical protein TERM 620 378361 - 378391 + g 93 -9 -4.41494 | CCGTACCTTCTAATT GCGCTTGAAGATTT AAG AAACCTTCGTGCGC TTTTAATTCAGGGTA TERM 621 378889 - 378872 - R 100 -9.1 -5.626 | opp_overlap 378872 TATTGGAGAAAAAAA CGGAGCC AACA AGCTCCG TTTTTTATCATCAAG TERM 622 378872 - 378889 + r 90 -8.4 -5.31275 | opp_overlap 378872 TATTGGAGAAAAAAA CGGAGC CAACAA GCTCCG TTTTTTATCATCAAG fruA 380570 - 378909 - | PTS system fructose-specific EIIBC component TERM 623 379034 - 379024 - G 91 -8.2 -4.62622 | opp_overlap 379024 GGAATCACAAATAAA CCGC CGT GCGG TGCTTGAAGCGTAAT TERM 624 379278 - 379291 + g 74 -9.5 -3.31208 | opp_overlap 379277 379278, overlap 379274 GCCAGCCGCCATAAC CGCCG CCAT CGGCG TATATTGTTGTGAAG fruK 381599 - 380652 - | 1-phosphofructokinase fruB 383122 - 381614 - | bifunctional fructose-specific PTS IIA/HPr protein TERM 625 381903 - 381952 + g 100 -15.9 -3.29461 | overlap 381904 CCTTCCACCGTAGGC TCGGAAGCGGTCGGATTTGCAAA ATTT TTTGCAGATTCAACCGCTTGCGG TTGTGCCGCACCTTC TERM 626 381904 - 381951 + g 100 -17.2 -2.57463 | overlap 381903 CTTCCACCGTAGGCT CGGAAGCGGTCGGATTTGCAAA ATTT TTTGCAGATTCAACCGCTTGCG GTTGTGCCGCACCTT TERM 627 384309 - 384341 + G 82 -10.5 -3.68886 | opp_overlap 384295 ACCGACCGGACTTTA TTCTCCGACCAGCCG ATT CGGTTCGCCGGAGGA TTTACGTACCTTGAT glgB 383383 - 385716 + | glycogen branching enzyme TERM 628 386536 - 386514 - g 86 -11.3 -3.29263 | opp_overlap 386511 AGATTTGGTTTATAA CCATACCGC AGAGG GCGGTACGG ACAGTTTAACGCTAT glgX 385723 - 387708 + | glycogen operon protein GlgX TERM 629 387770 - 387790 + G 71 -6.9 -4.17762 | opp_overlap 387773, overlap 387771 387773 AATCTGGTCTCGATA TTACTAACG ATA CGTTAGTAC TTATTTTAGCGGGTG TERM 630 387771 - 387789 + G 77 -10.4 -3.10175 | opp_overlap 387773, overlap 387770 387773 ATCTGGTCTCGATAT TACTAACG ATA CGTTAGTA CTTATTTTAGCGGGT TERM 631 387953 - 387929 - g 70 -3.6 -4.77157 | gap 1, overlap 387912 387930 CCAATTTATTAAAAA TCGGCGTGATT ACGC AAT-ACGCCGC ACACTCGTTACTTCG glgC 387724 - 389040 + | glucose-1-phosphate adenylyltransferase TERM 632 389052 - 389084 + F 77 -5.6 -4.83615 | gap 2, overlap 389058 TTAATTAATCTGTTT AGCC--GAGGACGCAC ATT GTGCGTCCTTTAGGCG TTTTTATAAGCGGTC TERM 633 389058 - 389076 + F 100 -14.6 -3.69455 | overlap 389052 AATCTGTTTAGCCGA GGACGCAC ATT GTGCGTCC TTTAGGCGTTTTTAT TERM 634 389306 - 389294 - g 74 -4.1 -5.01732 | AAGTGGCGGAAAAAA TTGGC GAA ACCAA TGAAGTGGCGACCAT glgA 389143 - 390579 + | glycogen synthase TERM 635 391038 - 391062 + G 73 -10.1 -3.01712 | overlap 391040 ATTCCGGCGATCGGT TACGGTATTCG TTA CGAATACGGTA TGTTCCGCCAAGAAA TERM 636 392338 - 392327 - g 82 -5.8 -5.0538 | CCGTATCTTAAAAAA TCCG AATG CGGA TTGGACGCCTCGTGT TERM 637 392660 - 392676 + G 71 -6.7 -4.21194 | TCTTGATTGTGTCGG TAAAGAT AAT ATCTTTA TTTTCGGTAATACGG glgP 390609 - 393113 + | glycogen phosphorylase TERM 638 393122 - 393167 + T 90 -13.5 -3.04144 | opp_overlap 393120 393125 393161, overlap 393125 TAAATAGCAGAAATT TAAGCGGTCTGTTTTTCGTAA GATT TTGCAAGAAACGGACCGCTTG TATTAGCGATAAAAA TERM 639 393125 - 393164 + T 95 -13 -3.66784 | opp_overlap 393120 393125 393161, overlap 393122 ATAGCAGAAATTTAA GCGGTCTGTTTTTCGTAA GATT TTGCAAGAAACGGACCGC TTGTATTAGCGATAA TERM 640 393164 - 393125 - T 75 -8.6 -3.34856 | opp_overlap 393125 393122, overlap 393120 393161 ATAGCAGAAATTTAA GCGGTCTGTTTTTCGTAA GATT TTGCAAGAAACGGACCGC TTGTATTAGCGATAA TERM 641 393206 - 393184 - T 100 -12.1 -5.28778 | opp_overlap 393184 ATTAGCGATAAAAAA GCCGTTTGT GTAAG ACAAACGGC TTTCTTTTTGGCTAT TERM 642 393184 - 393206 + T 100 -12.1 -4.89966 | opp_overlap 393184 ATTAGCGATAAAAAA GCCGTTTGT GTAAG ACAAACGGC TTTCTTTTTGGCTAT ndk 393641 - 393225 - | nucleoside diphosphate kinase TERM 643 393665 - 393683 + r 89 -7.4 -5.22312 | opp_overlap 393666, overlap 393666 CTTGTTCGCAAAAAA AGCGGTAA TTT TTACCGCC TTTTTTACTATAGCT TERM 644 393666 - 393682 + r 90 -10.9 -3.72302 | opp_overlap 393666, overlap 393665 TTGTTCGCAAAAAAA GCGGTAA TTT TTACCGC CTTTTTTACTATAGC TERM 645 393682 - 393666 - R 100 -10.9 -5.40072 | opp_overlap 393665 393666 TTGTTCGCAAAAAAA GCGGTAA TTT TTACCGC CTTTTTTACTATAGC metG 395727 - 393700 - | methionyl-tRNA synthetase TERM 646 395362 - 395330 - G 93 -10 -4.37886 | gap 1 GTACCTTTGACAAAA CGATCCGGAAGAAAC ATTT GTTT-TTCCGGGTCG AATAACTGAGAAATC TERM 647 395424 - 395440 + g 75 -5.8 -4.70169 | ATTTTTTATACATTT CCGTGG TAATT TCACGG TTTTCTTCACTGTGC TERM 648 395791 - 395767 - H 95 -8.6 -5.09426 | TGCAATCGGAAAAAA TCCCCCTTTT GTGTA AAGAGGGGGA ATAGGAAATTTAAAA TERM 649 396311 - 396297 - g 75 -5.6 -4.67038 | overlap 396298 TCGGCAAAATCAAAA TCGGCT TCG AGCCGG AAAAGGAAGGCGAGT TERM 650 396310 - 396298 - g 71 -9.1 -3.395 | overlap 396297 CGGCAAAATCAAAAT CGGCT TCG AGCCG GAAAAGGAAGGCGAG TERM 651 396365 - 396387 + G 100 -8.4 -4.8622 | overlap 396366 TTCCCACATCTTACC TTGCGTTTGG ATG CCAATCGCAG TTTTTCGTTGGCGCA TERM 652 396366 - 396386 + G 78 -9.7 -3.5125 | overlap 396365 TCCCACATCTTACCT TGCGTTTGG ATG CCAATCGCA GTTTTTCGTTGGCGC menC 395906 - 396868 + | O-succinylbenzoate synthase rsuA 397182 - 397874 + | ribosomal small subunit pseudouridine synthase A TERM 653 398042 - 398057 + G 71 -3.2 -5.00616 | overlap 398043 GTTTTTACCTTCGGT TTTGCC GTAG GGCAAC TTTTTTGGGGACCGA proP 397874 - 399070 + | bicyclomycin/multidrug efflux system TERM 654 399117 - 399084 - T 80 -6.7 -4.66609 | opp_overlap 399091, overlap 399086 399091 GATTTTATGTAAAAA CGGAAAAGCGGACAC TTAA GTGTCCGCTTTTTTT ACCAACAGGCATAAC TERM 655 399115 - 399086 - T 89 -13.7 -2.63208 | opp_overlap 399091, overlap 399084 399091 TTTTATGTAAAAACG GAAAAGCGGACAC TTAA GTGTCCGCTTTTT TTACCAACAGGCATA TERM 656 399110 - 399091 - T 100 -13.6 -4.4874 | opp_overlap 399091, overlap 399086 399084 TGTAAAAACGGAAAA GCGGACAC TTAA GTGTCCGC TTTTTTTACCAACAG TERM 657 399091 - 399110 + T 100 -13.6 -5.40072 | opp_overlap 399091 399086 399084 TGTAAAAACGGAAAA GCGGACAC TTAA GTGTCCGC TTTTTTTACCAACAG APL_0356 399502 - 399116 - | hypothetical protein TERM 658 399274 - 399289 + g 89 -6.8 -5.38958 | opp_overlap 399274 CTTTTTTCTGATAAC GCTGAG TAAA CTCGGC TTTTTCTTTCTCGGT TERM 659 399562 - 399528 - R 100 -10.9 -4.57073 | opp_overlap 399515 399511 399532 TATTGCGCTTAAAAA TTAAGCGCTCTGAGT TTATC ACTCAAAGAGCTTAA ATCAATAGTATTATT APL_0357 400142 - 399573 - | hypothetical protein nfo 400200 - 401042 + | endonuclease IV nlpC 401163 - 401759 + | putative lipoprotein TERM 660 401801 - 401777 - T 100 -10.1 -4.3467 | opp_overlap 401777 ACGTTTATATGAAAA GTCGTCAAAGA GGT TATTTGACGAC TTTTTTCTATGCCGC TERM 661 401777 - 401801 + T 100 -10.1 -5.36441 | opp_overlap 401777 ACGTTTATATGAAAA GTCGTCAAAGA GGT TATTTGACGAC TTTTTTCTATGCCGC impA 402263 - 401808 - | hypothetical protein TERM 662 402464 - 402437 - R 100 -14.4 -3.61709 | opp_overlap 402444, overlap 402444 GTAAAACAGAAGCAA TAAAAAAGCACC CGAA GGTGCTTTTTTA AGAAAATGAACAGTA TERM 663 402457 - 402444 - R 93 -8.1 -5.57396 | opp_overlap 402444, overlap 402437 AGAAGCAATAAAAAA GCACC CGAA GGTGC TTTTTTAAGAAAATG TERM 664 402444 - 402457 + r 90 -8.1 -5.0133 | opp_overlap 402444 402437 AGAAGCAATAAAAAA GCACC CGAA GGTGC TTTTTTAAGAAAATG grcA 402875 - 402489 - | autonomous glycyl radical cofactor GrcA ung 403081 - 403758 + | uracil-DNA glycosylase TERM 665 403825 - 403775 - T 95 -13.8 -3.34787 | gap 1, opp_overlap 403788, overlap 403777 403778 403788 AACAGTATTGCATAA TAT-TTACGTAAAAGACCAATCT AATAAA AGATTGGTCTTTTACGTAAGAGA AATAAATTTGTCTAG TERM 666 403822 - 403777 - T 100 -18 -3.23869 | opp_overlap 403788, overlap 403775 403778 403788 CAGTATTGCATAATA TTTACGTAAAAGACCAATCT AATAAA AGATTGGTCTTTTACGTAAG AGAAATAAATTTGTC TERM 667 403821 - 403778 - T 100 -21.5 -2.54 | opp_overlap 403788, overlap 403777 403775 403788 AGTATTGCATAATAT TTACGTAAAAGACCAATCT AATAAA AGATTGGTCTTTTACGTAA GAGAAATAAATTTGT TERM 668 403788 - 403811 + T 93 -9.7 -4.18018 | opp_overlap 403778 403777 403775 403788 AATATTTACGTAAAA GACCAATCT AATAAA AGATTGGTC TTTTACGTAAGAGAA TERM 669 403811 - 403788 - T 93 -9.7 -4.20932 | opp_overlap 403788, overlap 403778 403777 403775 AATATTTACGTAAAA GACCAATCT AATAAA AGATTGGTC TTTTACGTAAGAGAA APL_0363 404728 - 403856 - | hypothetical protein TERM 670 404799 - 404775 - R 74 -9.3 -3.10935 | opp_overlap 404775 404774, overlap 404773 404782 AGTTAAAAGGATATA GGCACAAGC AAAGCAA GCCTGTGCC ACTTTTAGGTTTGGA ssa1 407621 - 404823 - | serotype-specific antigen 1 precursor TERM 671 405098 - 405124 + g 86 -11.8 -2.98072 | overlap 405092 405102 ATTTAACGGTGTATT TTAATTTCACAC TCG GTGTGAGATTAA TATCGTTATAGTGAA TERM 672 405324 - 405336 + g 74 -7.7 -3.91882 | CTGAGATTTTTTGTA CCAAC GGC GTTGG TTGTATTTCTGCTGC TERM 673 405920 - 405939 + g 71 -2.1 -5.21236 | AATAGAGATCTTGCA TTAAGCC TTTATT GGCTAAA TTTTTATTATCAATT TERM 674 407833 - 407777 - R 100 -23.5 -3.26449 | gap 1, opp_overlap 407781 407786, overlap 407779 407781 CTTGATATAAGGTAA GAG-ATCCAAGCGGTCAGATTTGCAA TATTTT TTGCAAATCTGACCGCTTGGATGCTA TAGGAATGTTAATTT TERM 675 407830 - 407779 - R 100 -26.3 -3.19511 | opp_overlap 407781 407786, overlap 407777 407781 TGATATAAGGTAAGA GATCCAAGCGGTCAGATTTGCAA TATTTT TTGCAAATCTGACCGCTTGGATG CTATAGGAATGTTAA TERM 676 407781 - 407828 + r 100 -28.9 -2.63479 | opp_overlap 407779 407777 407781, overlap 407786 ATATAAGGTAAGAGA TCCAAGCGGTCAGATTTGCAA TATTTT TTGCAAATCTGACCGCTTGGA TGCTATAGGAATGTT TERM 677 407828 - 407781 - R 100 -28.9 -3.15379 | opp_overlap 407781 407786, overlap 407779 407777 ATATAAGGTAAGAGA TCCAAGCGGTCAGATTTGCAA TATTTT TTGCAAATCTGACCGCTTGGA TGCTATAGGAATGTT TERM 678 407786 - 407823 + r 100 -21.6 -3.11634 | opp_overlap 407781 407779 407777, overlap 407781 AGGTAAGAGATCCAA GCGGTCAGATTTGCAA TATTTT TTGCAAATCTGACCGC TTGGATGCTATAGGA hrpA 411741 - 407842 - | ATP-dependent RNA helicase HrpA TERM 679 409229 - 409245 + g 73 -5.2 -4.62471 | ACCGTATTGGCGTTT TCATTC ATTAA GAATGA TTTTTCAAAGTTGAG TERM 680 410011 - 410031 + g 80 -4.7 -5.16151 | TTGGCATTGTTTACG GAACTGGTT TTT GGTCAGTTC TTTTTGTTGGGTTTG TERM 681 411576 - 411586 + g 71 -4 -4.82333 | CACGTTCAATTTCCG CAAT CAC ATTG TTTTTGGCTTCTTGT TERM 682 411885 - 411846 - R 78 -7 -4.33819 | opp_overlap 411844 411846 AGTAGGTAGAAGAAA CCGCTTGCAGCACTCACT AATA AGGGAGAGGAACAAGCGG TCTGATTTTGAATCA APL_0366 412363 - 411911 - | hypothetical protein grpE 413156 - 412560 - | heat shock protein (HSP-70 cofactor) TERM 683 413483 - 413472 - g 70 -3.6 -4.78572 | overlap 413479 413480 GTGTAATGAAGAAAA GCCA AAAG CGGC TGAAGCAGCGGCTCA TERM 684 413495 - 413479 - g 82 -7.9 -4.4836 | overlap 413472 413480 GAAGAAAAGCCAAAA GCGGCTG AAG CAGCGGC TCAACCGGCAGCAGC TERM 685 414332 - 414295 - g 74 -6.3 -4.56597 | overlap 414299 CCGGTTGCGGAAAAA TTAACGTTAGAAATCGG TTAT CCGACTTCAAACGTAGA AGCGTTAAAAACATT TERM 686 414328 - 414299 - g 95 -11.5 -3.80855 | overlap 414295 TTGCGGAAAAATTAA CGTTAGAAATCGG TTAT CCGACTTCAAACG TAGAAGCGTTAAAAA TERM 687 414378 - 414357 - g 70 -7.3 -3.77413 | overlap 414355 AACATTACCAAAAGA GATTACCGA AGAT CCGGCAATC TATCCGACAGCTGAT potD2 413401 - 414483 + | spermidine/putrescine-binding periplasmic protein 1 precursor TERM 688 414530 - 414505 - f 95 -11.9 -3.97636 | opp_overlap 414505 AGCCTAACGGATAAA GCCCTCGAGAA GCGA TTTTCGAGGGC TTTTCGTTTTTACAA TERM 689 414505 - 414530 + F 100 -14.1 -4.77757 | opp_overlap 414505 AGCCTAACGGATAAA GCCCTCGAGAA GCGA TTTTCGAGGGC TTTTCGTTTTTACAA norM 414627 - 416018 + | putative multidrug resistance protein NorM recB 416034 - 419642 + | exodeoxyribonuclease V beta chain TERM 690 419670 - 419702 + T 100 -11.6 -5.00616 | opp_overlap 419670 419674, overlap 419674 CATTAAGCTGAAAAA TAAAGCACTAAAAT AATAA GTTTTAGTGCTTTA TTTTTTAAACAAGCG TERM 691 419702 - 419670 - T 100 -10.9 -4.67904 | opp_overlap 419670 419674, overlap 419674 CATTAAGCTGAAAAA TAAAGCACTAAAA TAATAAG TTTTAGTGCTTTA TTTTTTAAACAAGCG TERM 692 419674 - 419698 + T 90 -8 -5.04249 | opp_overlap 419674 419670, overlap 419670 AAGCTGAAAAATAAA GCACTAAAAT AATAA GTTTTAGTGC TTTATTTTTTAAACA TERM 693 419698 - 419674 - T 88 -7.3 -4.88293 | opp_overlap 419670 419674, overlap 419670 AAGCTGAAAAATAAA GCACTAAAA TAATAAG TTTTAGTGC TTTATTTTTTAAACA lnt 421231 - 419720 - | apolipoprotein N-acyltransferase TERM 694 421299 - 421280 - R 100 -9.3 -5.11389 | opp_overlap 421278 421276 421280 ATAACACAAACAAAA GGTGAGG ATAAAA CCTCACC TATATATTATTCATT TERM 695 421280 - 421299 + r 77 -9.3 -3.21182 | opp_overlap 421280, overlap 421278 421276 ATAACACAAACAAAA GGTGAGG ATAAAA CCTCACC TATATATTATTCATT corC 422206 - 421313 - | magnesium and cobalt efflux protein APL_0373 422376 - 422978 + | hypothetical protein TERM 696 423020 - 423003 - f 83 -9.9 -3.76224 | opp_overlap 423003 TTTTTACGGATTAAA CCTCAAC TTCG GTTGAGG TTTTTTTGTCTGTTT TERM 697 423003 - 423020 + F 100 -9.9 -5.82281 | opp_overlap 423003 TTTTTACGGATTAAA CCTCAAC TTCG GTTGAGG TTTTTTTGTCTGTTT TERM 698 423116 - 423128 + F 71 -3.4 -5.04175 | overlap 423102 GCATTTTTCCGTTTG CGAA AAATG TTCG TTTTTATATAGTTCG glpF 423214 - 423996 + | glycerol uptake facilitator protein TERM 699 424319 - 424308 - g 85 -7.2 -4.85782 | opp_overlap 424308 TTTGGGAAAAAGAAA CCGG TAAA CCGG TTTACAATGCGATTG TERM 700 424504 - 424493 - g 90 -7.2 -5.0916 | opp_overlap 424496 424498, overlap 424495 GGCGCAAGAGAAAAA GCCG AGCT CGGC GAGCTGTTATTCGGT glpK 424031 - 425542 + | glycerol kinase TERM 701 425640 - 425618 - T 100 -15 -5.01422 | opp_overlap 425618 TTATAGAAAAACAAA GGGCTTCAAA TAA TTTGAAGCCC TTTTTACGTTATATT TERM 702 425618 - 425640 + T 100 -15 -4.8066 | opp_overlap 425618 TTATAGAAAAACAAA GGGCTTCAAA TAA TTTGAAGCCC TTTTTACGTTATATT TERM 703 425674 - 425688 + T 74 -2.1 -5.58209 | gap 1, overlap 425674 425675 ACGATTATTGAATAG C-CGCT TTTG AGCGAG TTTTTTTCACTTTAA lon 428071 - 425663 - | ATP-dependent protease La TERM 704 426070 - 426082 + g 86 -7.7 -4.72986 | CGTCCGGCACGTGTA CGTGA ATA TCACG TTTTTCATAGAAGTC TERM 705 427616 - 427626 + g 78 -5.4 -5.06116 | opp_overlap 427616 TAACTTAGGTAGAAT TTCC GCC GGAA TTTTCTTGTTATTTT TERM 706 428038 - 428050 + g 87 -6.3 -5.20735 | GTAATGGAAGAAGTG GCAAT TCA ATTGC TTTCTTTTTTCTTGG TERM 707 428101 - 428120 + r 71 -5.7 -4.56597 | opp_overlap 428101 TTTTTCTATCAATGA TTAGCCC ATTATG GGGCTGA TTTTTGGAAAAACAA TERM 708 428161 - 428190 + r 95 -13.8 -3.37091 | opp_overlap 428161, overlap 428156 GATTAAAATTAAAAA GAGAGGAAATAC CGGATA GTATTTCCTCTC TTAAGTTTTAACGAT TERM 709 428190 - 428161 - R 100 -14.5 -5.1166 | opp_overlap 428161 428156 GATTAAAATTAAAAA GAGAGGAAATACC GGAT AGTATTTCCTCTC TTAAGTTTTAACGAT glpT 429662 - 428217 - | glycerol-3-phosphate transporter TERM 710 428974 - 428999 + g 73 -8.3 -3.72893 | opp_overlap 428980 CATTTTTCTACCGGC GGTAAACCGCA AGAT TGCGGTGTATC TTTCATCACGAAATA TERM 711 429711 - 429698 - R 83 -6.7 -4.88067 | opp_overlap 429699 429700, overlap 429700 ATTTATTGATAAAAA GTTCG ATTA CGAAC AATCGAGTATATTCT TERM 712 429747 - 429737 - R 82 -5.4 -5.37043 | ATTCTATATAAAAAA GAGT AAT ACTC CATAAAAATTATTCA glpQ 430953 - 429865 - | glycerophosphodiester phosphodiesterase TERM 713 431296 - 431326 + G 73 -8.3 -3.61922 | gap 1, overlap 431289 431320 GCGGCGCAACGGGAG CCG-GTATTGCGCG AGAT TGCGCATTACGCGG TTTAAAATGCGTATT TERM 714 431383 - 431359 - g 71 -9.3 -3.02739 | opp_overlap 431356 TTGAACGTAGAGACA TTGCAACCGGT GCG ACCGGTCGTAA TCATGGTTTACTACA glpA 431205 - 432890 + | sn-glycerol-3-phosphate dehydrogenase subunit A TERM 715 433969 - 433959 - g 77 -8.2 -4.07133 | TACTTGGACAAATAA CCGC TTT GCGG CACCTCAACCTTATC glpB 432880 - 434166 + | anaerobic glycerol-3-phosphate dehydrogenase subunit B TERM 716 434335 - 434325 - g 71 -6.8 -4.17048 | CCGGGGCCAAAACAA TCCG GTC CGGA CGGCGAGCGTTTACG TERM 717 434942 - 434929 - g 71 -3.1 -5.04987 | AATATCTTGAAAAAA CCGTT AATA AACAG TTGGAAGTGATCGGT glpC 434163 - 435437 + | sn-glycerol-3-phosphate dehydrogenase subunit C TERM 718 435480 - 435464 - f 80 -7.3 -4.48987 | opp_overlap 435464 CTTTGACAATCAAAA GTCGCAA AAT TTGCAAC AATTTTTTAATAATC TERM 719 435679 - 435654 - g 78 -10.5 -3.29144 | opp_overlap 435654 CTATCTTTTTTACAA GCCTTGAGATC GAAA GATTTCAAGGC TTTTTTCATCATTAG TERM 720 435654 - 435679 + G 100 -12.7 -5.2189 | opp_overlap 435654 CTATCTTTTTTACAA GCCTTGAGATC GAAA GATTTCAAGGC TTTTTTCATCATTAG ribD 435609 - 436841 + | riboflavin biosynthesis protein ribE 436964 - 437611 + | riboflavin synthase subunit alpha ribA 437672 - 438877 + | riboflavin biosynthesis protein TERM 721 438902 - 438922 + F 75 -9.7 -2.63913 | opp_overlap 438907 CCGTATGTAGTATTA GGGAAGCAA GCG TTGCGTCCC TACTATAGAATGATA TERM 722 439318 - 439307 - g 72 -7.2 -3.99324 | opp_overlap 439305 439307 CGGTAGCATTAGAAA CCGG CGTA CCGG TAATTTTCGGTGTAT ribH 438988 - 439449 + | 6,7-dimethyl-8-ribityllumazine synthase TERM 723 439471 - 439529 + T 100 -13.5 -4.62984 | gap 1, opp_overlap 439472, overlap 439475 TTTGACGTGCTAAAA -ACAAGCGGTCGTTTTTGACTGGAATTT TGCA AATTTCCCGTTAAAAACGACCGCTTATA TTTTATGTCTAGTAA TERM 724 439527 - 439472 - T 100 -18.6 -4.58395 | opp_overlap 439471 439475 TTGACGTGCTAAAAA CAAGCGGTCGTTTTTGACTGGAATTT TGCA AATTTCCCGTTAAAAACGACCGCTTA TATTTTATGTCTAGT TERM 725 439475 - 439524 + T 100 -20.3 -4.06765 | opp_overlap 439472, overlap 439471 ACGTGCTAAAAACAA GCGGTCGTTTTTGACTGGAATTT TGCA AATTTCCCGTTAAAAACGACCGC TTATATTTTATGTCT greB 440026 - 439538 - | transcription elongation factor GreB kpsF 440971 - 440036 - | arabinose-5-phosphate isomerase pepB 442391 - 441099 - | aminopeptidase B TERM 726 441279 - 441249 - G 73 -3.9 -4.95806 | gap 1 AAAGTACGATAAAAA GGCGGTTGCC-GTG CTTG CACCGGCACCAACC GGTACTGATCCGATA TERM 727 442479 - 442463 - R 100 -9.4 -5.4492 | opp_overlap 442465 GAGAGATAGAAAAAA GACCGC TTGTG GCGGTC TTCGGAAGTGAATTT ompP4 443321 - 442506 - | lipoprotein E precursor TERM 728 442681 - 442691 + g 79 -3.2 -5.28176 | opp_overlap 442673 442676, overlap 442676 ACAAAATCACGGCGT TCCG CAT TGGA TTTTTTGTAGGTCGC APL_0390 443494 - 444432 + | hypothetical protein TERM 729 444439 - 444423 - T 77 -5.9 -4.72272 | CGCCTCGATTAAAAA CGAAAAA TAA TTTCTCG GACGGTTTAATGTAA TERM 730 444455 - 444501 + T 100 -18.3 -4.30978 | opp_overlap 444456 444459, overlap 444456 GACGGTTTAATGTAA ACAAGCGGTGGAAATTTACTA AAATA TTGTAAATTTCCACCGCTTGC TTTTAGTCAATTAGA TERM 731 444500 - 444456 - T 100 -21.8 -3.75332 | opp_overlap 444456 444455, overlap 444459 ACGGTTTAATGTAAA CAAGCGGTGGAAATTTACTA AAATA TTGTAAATTTCCACCGCTTG CTTTTAGTCAATTAG TERM 732 444456 - 444500 + T 100 -21.8 -3.18105 | opp_overlap 444456 444459, overlap 444455 ACGGTTTAATGTAAA CAAGCGGTGGAAATTTACTA AAATA TTGTAAATTTCCACCGCTTG CTTTTAGTCAATTAG TERM 733 444497 - 444459 - T 100 -17.7 -4.0098 | opp_overlap 444456 444455, overlap 444456 GTTTAATGTAAACAA GCGGTGGAAATTTACTA AAATA TTGTAAATTTCCACCGC TTGCTTTTAGTCAAT macA 445693 - 444512 - | macrolide-specific efflux protein TERM 734 445211 - 445247 + g 73 -5.1 -4.64657 | overlap 445231 445232 TTTAATTTGCGCTTT TACGTTATCTACCGTCG CTC TGGCGGAAGCTAAGGTA TTTTTCGCCGTTTCA APL_0392 446605 - 445790 - | hypothetical protein TERM 735 447070 - 447087 + H 100 -8.4 -5.98781 | ACTATCCACACTTTG CCCGCA CATTGA TGCGGG TTTTTTTTACTTATA TERM 736 447187 - 447175 - H 74 -6.3 -4.4017 | opp_overlap 447175 TGAATTCGGATAAAA GTGTT GAG AACAC TTAATGGAGAGCTTA leuA 447202 - 448743 + | 2-isopropylmalate synthase TERM 737 448820 - 448762 - f 93 -10.7 -4.08349 | opp_overlap 448767 448809 448810, overlap 448767 448809 448810 ATTTTAAAAAGATAA GATAAGCGGTCAGATTTGA-TGGAAATTT TGT AAAAATCCAGTAAAATCTGACCGCTT-TC AGTCATTAAATAAGA TERM 738 448767 - 448816 + F 90 -11.7 -3.71794 | gap 1, opp_overlap 448762 448767 448809 448810, overlap 448809 448810 AAAAAGATAAGATAA GCGGTCAGATTTGA-TGGAAATTT TGT AAAAATCCAGTAAAATCTGACCGC TTTCAGTCATTAAAT TERM 739 448816 - 448767 - f 93 -11.7 -3.90967 | gap 1, opp_overlap 448767 448809 448810, overlap 448762 448809 448810 AAAAAGATAAGATAA GCGGTCAGATTTGA-TGGAAATTT TGT AAAAATCCAGTAAAATCTGACCGC TTTCAGTCATTAAAT TERM 740 448998 - 449008 + F 73 -4 -5.06816 | AATTTATTCTTTATA TGAA CTT TTCA TTTTTGTTACACACT TERM 741 449487 - 449470 - g 76 -7 -4.56133 | overlap 449465 TCCGAAGAATTAAAA CGTGTC GTTTTT GACACG ATTGAAAATTTACCT rpoE 449086 - 449664 + | RNA polymerase sigma factor RpoE TERM 742 449749 - 449729 - g 74 -4 -5.05782 | ATGGACGGGAAAAAA GTTGATGA TGCGT TCATCGAC GAGTTATGCGAAAGT rseA 449684 - 450307 + | putative sigma-E factor negative regulatory protein TERM 743 450371 - 450420 + F 100 -19.1 -6.23317 | gap 1, opp_overlap 450371 CTACTAACGAAGAAA GCGGTAAGATT-TAGCGAATTTTT TGA GAAAATTTGCTACAATCTTACCGC TTTTTTTATTTTTCT TERM 744 450420 - 450371 - f 100 -16.2 -4.34737 | gap 1, opp_overlap 450371 CTACTAACGAAGAAA GCGGTAAGATT-TAGCGAATTTT TTGAG AAAATTTGCTACAATCTTACCGC TTTTTTTATTTTTCT rseC 450532 - 450960 + | putative sigma-E factor regulatory protein TERM 745 450993 - 450982 - g 75 -3 -5.11613 | opp_overlap 450982 ACAGTATGGAAAAAA TTTG GTTA CAAA ATTATCCTGAAGGCT lcfA 450972 - 452663 + | long-chain-fatty-acid--CoA ligase upp 452730 - 453356 + | uracil phosphoribosyltransferase TERM 746 453395 - 453377 - T 100 -11.8 -6.01725 | opp_overlap 453377 AATAAAAACAAAAAA CCTAAGAG AAT CTCTTAGG TTTTTTTATATCTAT TERM 747 453377 - 453395 + T 100 -11.8 -5.77988 | opp_overlap 453377 AATAAAAACAAAAAA CCTAAGAG AAT CTCTTAGG TTTTTTTATATCTAT TERM 748 453417 - 453454 + T 79 -9.3 -3.36968 | opp_overlap 453417, overlap 453426 TATATCTATGACTAA GCGGTGGAATTTGCAAA ATTT TTTACAAATTTAACCGC TTGTCAGATTAGATA TERM 749 453454 - 453417 - T 77 -9.3 -3.22774 | opp_overlap 453417 453426 TATATCTATGACTAA GCGGTGGAATTTGCAAA ATTT TTTACAAATTTAACCGC TTGTCAGATTAGATA ksgA 454332 - 453463 - | dimethyladenosine transferase TERM 750 454379 - 454357 - R 100 -11.3 -4.20834 | opp_overlap 454360 TTTAAAATAAGCAAA GAACCCCGC AAATA GCGAGGTTC TCAGATAAATCGTTA surA 455348 - 454398 - | peptidyl-prolyl cis-trans isomerase SurA pyrR 455968 - 455429 - | pyrimidine regulatory protein PyrR TERM 751 455499 - 455522 + g 73 -3.8 -5.02074 | overlap 455501 GTTCGCACTTGTACT TGTTCCGTTC TTGC GGTCGGAATA TTTTTTCCGACATAA hldE 457414 - 455984 - | bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase TERM 752 457463 - 457435 - R 78 -7.3 -4.41047 | opp_overlap 457442, overlap 457437 457438 ATTTCTCAATTAAAA GATGGCGCTCGTC TGT GACGAGTGCCTTA AACCTTATTTAGATA TERM 753 457461 - 457437 - R 83 -9.9 -3.8125 | opp_overlap 457442, overlap 457435 457438 TTCTCAATTAAAAGA TGGCGCTCGTC TGT GACGAGTGCCT TAAACCTTATTTAGA TERM 754 457460 - 457438 - R 89 -13.4 -2.88268 | opp_overlap 457442, overlap 457437 457435 TCTCAATTAAAAGAT GGCGCTCGTC TGT GACGAGTGCC TTAAACCTTATTTAG TERM 755 457442 - 457456 + r 75 -10 -2.5409 | opp_overlap 457438 457437 457435 AATTAAAAGATGGCG CTCGTC TGT GACGAG TGCCTTAAACCTTAT engA 459048 - 457528 - | GTP-binding protein EngA TERM 756 457607 - 457618 + g 70 -7.2 -3.77953 | AGTTTATTTTTCTTA CCCG CAAA CGGG TTATTACCTTCTTGG TERM 757 457855 - 457868 + g 78 -2.3 -5.47159 | TAAAATACGCGTTAA CATCG AAGT CGAAG TTTTTTGTGTTGCAC TERM 758 458703 - 458714 + g 82 -5.8 -5.03314 | CCGTTTTGTTGGCGA CCAC CACG GTGG TTTTTTCACGCTGAC TERM 759 459142 - 459187 + r 100 -14.9 -4.36372 | opp_overlap 459145, overlap 459145 GAAAAAGGATCAAAA AAAGCGGTCGATTTTCTGCAA AATT TTACCGAAAATCGACCGCTTG TTTATTGAGTTTTTT TERM 760 459145 - 459184 + r 100 -16.6 -4.25064 | opp_overlap 459145, overlap 459142 AAAGGATCAAAAAAA GCGGTCGATTTTCTGCAA AATT TTACCGAAAATCGACCGC TTGTTTATTGAGTTT TERM 761 459184 - 459145 - R 100 -18.8 -5.5943 | opp_overlap 459145 459142 AAAGGATCAAAAAAA GCGGTCGATTTTCTGCAA AATT TTACCGAAAATCGACCGC TTGTTTATTGAGTTT hemA 460516 - 459206 - | glutamyl-tRNA reductase TERM 762 460555 - 460543 - H 100 -9.1 -5.93252 | GCTAAAAACAAAAAA CGGCA AAA TGCCG TTGAAACCGACCTAT TERM 763 462755 - 462731 - g 72 -7.9 -3.75665 | GGAGAGGGTAGTAAA TGCACAATGGG GAA CGCATTATGCA AACGGCTTTAGTTTG relA 460794 - 463001 + | GTP pyrophosphokinase TERM 764 463006 - 463049 + F 84 -5.3 -5.49729 | opp_overlap 463006 463009 TATCAAATTAAGTGA CAAGCGGTCGAATTTGTAA AAAAAA TCACAAAAAAGACCGCTTG TTTTTTTGAGTGATT TERM 765 463174 - 463146 - g 100 -13.3 -3.65812 | opp_overlap 463151, overlap 463151 GGTGGTGGAACAGAA CAAAACCGAATAC GAA GTATTCGGTTTGG TCGGCGGTAAAAATG TERM 766 463169 - 463151 - g 100 -11.8 -4.90381 | opp_overlap 463151, overlap 463146 TGGAACAGAACAAAA CCGAATAC GAA GTATTCGG TTTGGTCGGCGGTAA TERM 767 463151 - 463169 + G 93 -11.8 -3.73224 | opp_overlap 463151 463146 TGGAACAGAACAAAA CCGAATAC GAA GTATTCGG TTTGGTCGGCGGTAA dxr 463075 - 464265 + | 1-deoxy-D-xylulose 5-phosphate reductoisomerase TERM 768 464308 - 464271 - T 100 -12.9 -5.66684 | opp_overlap 464271 TAATTTATAAAAAAA GCGGTGTAATTTGTTAA AAAC TTTGCAAATTACACCGC TTGTCTATTCGGTCG TERM 769 464271 - 464308 + T 100 -15.1 -3.69482 | opp_overlap 464271 TAATTTATAAAAAAA GCGGTGTAATTTGTTAA AAAC TTTGCAAATTACACCGC TTGTCTATTCGGTCG lpxA 465119 - 464325 - | UDP-N-acetylglucosamine acyltransferase TERM 770 464478 - 464504 + g 73 -7.3 -4.14392 | gap 1 ATTACGAATGGCGTG CATCGCTGGCTT ATCA AAGCC-GCGACG TTTTAAACCTTCCAA fabZ 465611 - 465147 - | (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase TERM 771 465667 - 465650 - R 100 -9.9 -4.40882 | overlap 465647 TATAAACTAAAATAA GGCTTAC AGCG GTAAGCC CATAAAAAATGCTTA lpxD 466705 - 465680 - | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase TERM 772 466209 - 466194 - G 74 -7.6 -4.00756 | opp_overlap 466193, overlap 466181 GATTGGATTAAACAA TCCGAA CCGA TTCGGA CGTTATGGTAAACCG TERM 773 466675 - 466633 - G 90 -10.7 -3.92522 | gap 1, opp_overlap 466641 466669, overlap 466635 466636 466641 CGGCAATGCTAGAAA TAGCCAAATCGGCGTTACCC CTTA GAGTACCGCCGATTT-GCTC CGCAAGTTCAATTAA TERM 774 466673 - 466635 - G 100 -13.3 -3.55191 | gap 1, opp_overlap 466641 466669, overlap 466633 466636 466641 GCAATGCTAGAAATA GCCAAATCGGCGTTACCC CTTA GAGTACCGCCGATTT-GC TCCGCAAGTTCAATT TERM 775 466673 - 466636 - G 93 -13.5 -2.72632 | opp_overlap 466641 466669, overlap 466635 466633 466641 CAATGCTAGAAATAG CCAAATCGGCGTTACCC CTTA GAGTACCGCCGATTTGC TCCGCAAGTTCAATT TERM 776 466641 - 466668 + g 80 -9.8 -3.73072 | opp_overlap 466635 466636 466633 466641 CTAGAAATAGCCAAA TCGGCGTTACCC CTTA GAGTACCGCCGA TTTGCTCCGCAAGTT TERM 777 466668 - 466641 - G 100 -12 -3.83324 | opp_overlap 466641, overlap 466635 466636 466633 CTAGAAATAGCCAAA TCGGCGTTACCC CTTA GAGTACCGCCGA TTTGCTCCGCAAGTT APL_0410 467511 - 466705 - | hypothetical protein TERM 778 467631 - 467607 - R 83 -6.5 -4.84582 | overlap 467598 AAAAAATAGACAAAA TCTAACCGCTT GTT AATCGATTAGA ACGAGCTACCGATAC D15 470008 - 467627 - | protective surface antigen D15 precursor TERM 779 467966 - 467998 + g 73 -8.8 -3.53811 | gap 1, opp_overlap 467973, overlap 467969 ATCGCTTGCATTCGT G-AATTTATTACTCT GCGT AGAGTAATAAATTGC TTTAGGACCAATCGC TERM 780 467969 - 467994 + g 83 -10.7 -3.51232 | opp_overlap 467973, overlap 467966 GCTTGCATTCGTGAA TTTATTACTCT GCGT AGAGTAATAAA TTGCTTTAGGACCAA ecfE 471383 - 470070 - | putative zinc metalloprotease TERM 781 471007 - 471017 + g 79 -8.2 -4.15006 | TCCGGTAAAATCTGT CCGG TAA CCGG TTTTAGAGTCGGTAT cdsA 472259 - 471390 - | phosphatidate cytidylyltransferase TERM 782 471565 - 471551 - G 75 -8.6 -3.76373 | CGCCTAATACGGAAA TCGCAA CCG TTGCGA CGGAAACTAAAATAA uppS 472997 - 472284 - | undecaprenyl pyrophosphate synthetase TERM 783 472697 - 472716 + g 82 -6.6 -4.86033 | opp_overlap 472700 CACTCTTATTACCGA TAATATTC AAAC GAATATTA TTTTTATGCAGCTTT TERM 784 473161 - 473134 - R 93 -11.5 -3.99324 | opp_overlap 473134 473138, overlap 473138 TGGCAGGAGGAGAAA TAAACGGGAAA GCTTTA TTTCCCGTTTA TTATGGATTAGAAAT TERM 785 473134 - 473161 + r 89 -11.5 -3.42056 | opp_overlap 473134 473138, overlap 473138 TGGCAGGAGGAGAAA TAAACGGGAAA GCTTTA TTTCCCGTTTA TTATGGATTAGAAAT TERM 786 473157 - 473138 - R 82 -7.9 -4.59944 | opp_overlap 473134 473138, overlap 473134 AGGAGGAGAAATAAA CGGGAAA GCTTTA TTTCCCG TTTATTATGGATTAG TERM 787 473138 - 473157 + r 81 -7.9 -4.35604 | opp_overlap 473138 473134, overlap 473134 AGGAGGAGAAATAAA CGGGAAA GCTTTA TTTCCCG TTTATTATGGATTAG gloB 473876 - 473169 - | putative hydroxyacylglutathione hydrolase TERM 788 473922 - 473897 - R 100 -12.7 -4.96848 | opp_overlap 473900 473902 TTTCCTATATAAAAA GAATACACGGG AAGT CCCATGTATTC GGTAAAAACAAATTA APL_0416 474852 - 473935 - | N-acetyl-D-glucosamine kinase pgpB 475559 - 474855 - | phosphatidylglycerophosphatase B TERM 789 475167 - 475183 + g 95 -8 -5.00616 | opp_overlap 475165 475166 475167, overlap 475165 TGATACGATAAAATC CGCATC ATTCG GATGCG TTTTTTCCGCAAGGG TERM 790 475631 - 475614 - R 100 -9.1 -5.24129 | TTTCCTCATAAAAAA GACCGCT TACA AGCGGCC AGATTTGAATAAAAA APL_0418 476052 - 475651 - | hypothetical protein lgtF 476090 - 476848 + | UDP-glucose--lipooligosaccharide glucosyltransferase TERM 791 476904 - 476871 - T 100 -11.2 -5.4477 | gap 1, opp_overlap 476871 AAATTGCCAAAAAAA GACCGCTTGTA-ATG CTGAT CATGCACAAGCGGTC TTTTTCTTAAATATC TERM 792 476871 - 476904 + T 95 -9 -5.12068 | gap 1, opp_overlap 476871 AAATTGCCAAAAAAA GACCGCTTGT-AATG CTGAT CATGCACAAGCGGTC TTTTTCTTAAATATC pbpG 477731 - 476952 - | penicillin-binding protein 7 precursor waaQ 478852 - 477815 - | heptosyltransferase TERM 793 478335 - 478345 + g 71 -3.2 -5.06414 | overlap 478324 478321 478316 ATTTGCAGATTTTTT GCTA ATT TGGC TTTTTGTTGCGCAAG TERM 794 478403 - 478417 + g 85 -7.1 -4.82901 | opp_overlap 478405 478413 CGGATTAGGCTCAAC CACCG CAATA CGGTG TTTTTGTAGAAAAGC argG 479096 - 480427 + | argininosuccinate synthase TERM 795 480463 - 480496 + F 76 -4.5 -5.19261 | opp_overlap 480468, overlap 480468 AAACTTAGAATCAAT CAAAAGCCCCATAGT TTAT GCTTTGGGGCTTTAA TTTTTTCATCAGTTT TERM 796 480468 - 480491 + F 89 -8.8 -4.45175 | opp_overlap 480468, overlap 480463 TAGAATCAATCAAAA GCCCCATAGT TTAT GCTTTGGGGC TTTAATTTTTTCATC TERM 797 480491 - 480468 - f 84 -8.1 -4.51197 | opp_overlap 480463 480468 TAGAATCAATCAAAA GCCCCATAG TTTATG CTTTGGGGC TTTAATTTTTTCATC rnhA 480549 - 481010 + | ribonuclease H TERM 798 481102 - 481120 + F 86 -5.3 -5.61277 | overlap 481103 ATGCATTTTTTACGA TGTTTGC TCTAC GCAAACG TTTTCTTTTTTTGTA cvpA 481167 - 481670 + | colicin V production protein purF 481684 - 483201 + | amidophosphoribosyltransferase TERM 799 483206 - 483261 + T 90 -8.4 -5.1485 | opp_overlap 483217 483220, overlap 483220 483254 483258 ACGAAAACTAAATTC AAGCATAAAAACAAGCCCTTGAGTCC GCGA GGATTCAAGGGCTTTTCTGTATGATA TTTTTATCTTACTTA TERM 800 483250 - 483217 - T 100 -12.5 -4.98857 | opp_overlap 483206 483220, overlap 483220 ATTCAAGCATAAAAA CAAGCCCTTGAGTCC GCGA GGATTCAAGGGCTTT TCTGTATGATATTTT TERM 801 483220 - 483247 + T 100 -16.4 -4.63586 | opp_overlap 483217 483220, overlap 483206 CAAGCATAAAAACAA GCCCTTGAGTCC GCGA GGATTCAAGGGC TTTTCTGTATGATAT TERM 802 483247 - 483220 - T 100 -14.2 -4.58563 | opp_overlap 483220 483206, overlap 483217 CAAGCATAAAAACAA GCCCTTGAGTCC GCGA GGATTCAAGGGC TTTTCTGTATGATAT APL_0426 483728 - 483270 - | hypothetical protein TERM 803 483605 - 483619 + g 100 -8.6 -4.81359 | GTATAAGTATTTTTA TATCCG TTT CGGATA TTTTATATTTAACTT TERM 804 483804 - 483791 - R 90 -8.1 -4.85782 | opp_overlap 483791 TTGCGCAAAAAGAAA CCCTC CGAA GAGGG TTTATATTATATAAA TERM 805 483791 - 483804 + r 83 -8.1 -4.31164 | opp_overlap 483791 TTGCGCAAAAAGAAA CCCTC CGAA GAGGG TTTATATTATATAAA gdhA 485164 - 483824 - | glutamate dehydrogenase TERM 806 485213 - 485201 - R 71 -3.5 -5.10154 | ATTTAAAATGAAAAA TATTT ATC AAATA GTAGTGTGTTTAGCA TERM 807 485301 - 485282 - R 84 -3.7 -5.71638 | opp_overlap 485282 CAATAATTAAAAAAA TTTATCA AATATA TGATAAA AATTTATTATTTGGT TERM 808 485430 - 485449 + r 73 -9.3 -2.81291 | opp_overlap 485430, overlap 485429 AATGGGTAAAAGAAA GCCCACT ATATAA AGTGGGC GTTTGAAGTTGTCAA TERM 809 485449 - 485430 - R 100 -9.3 -4.66535 | opp_overlap 485429 485430 AATGGGTAAAAGAAA GCCCACT ATATAA AGTGGGC GTTTGAAGTTGTCAA smpA 485812 - 485468 - | small protein A APL_0429 486884 - 485883 - | nucleoid-associated protein NdpA APL_0430 486977 - 487366 + | hypothetical protein APL_0431 487394 - 488131 + | hypothetical protein leuB 488696 - 489778 + | 3-isopropylmalate dehydrogenase TERM 810 489800 - 489858 + T 100 -13.7 -3.94409 | gap 2, opp_overlap 489801 489804, overlap 489801 489804 AATTATTTCGTATAA -ACAAGCGGTCGAAATTTGAA-AATAATT TGC AAAAATTCTTCAAATTTCGACCGCTTGTC TTTATGCCTAATGTA TERM 811 489856 - 489801 - T 100 -21 -3.87075 | gap 1, opp_overlap 489800 489801 489804, overlap 489804 ATTATTTCGTATAAA CAAGCGGTCGAAATTTGAAAATAATTT GCA AAAAT-TCTTCAAATTTCGACCGCTTG TCTTTATGCCTAATG TERM 812 489801 - 489856 + T 100 -18.8 -3.55824 | gap 1, opp_overlap 489801 489804, overlap 489800 489804 ATTATTTCGTATAAA CAAGCGGTCGAAATTTGAA-AATAATT TGC AAAAATTCTTCAAATTTCGACCGCTTG TCTTTATGCCTAATG TERM 813 489804 - 489853 + T 100 -14.7 -3.90766 | gap 1, opp_overlap 489801 489804, overlap 489801 489800 ATTTCGTATAAACAA GCGGTCGAAATTTGAA-AATAATT TGC AAAAATTCTTCAAATTTCGACCGC TTGTCTTTATGCCTA TERM 814 489853 - 489804 - T 100 -16.9 -4.06687 | gap 1, opp_overlap 489804 489801 489800, overlap 489801 ATTTCGTATAAACAA GCGGTCGAAATTTGAAAATAATTT GCA AAAAT-TCTTCAAATTTCGACCGC TTGTCTTTATGCCTA msrB 490297 - 489902 - | methionine sulfoxide reductase B gapA 490520 - 491524 + | glyceraldehyde-3-phosphate dehydrogenase TERM 815 491548 - 491568 + F 100 -12.6 -5.96894 | opp_overlap 491533 GTCGCTTATTGCATA CGCCACTC CAAAA GAGTGGCG TTTTTTTGTTTAAAT TERM 816 492168 - 492149 - g 70 -7.8 -3.73783 | TATTTAATTGAAGAA CCGATGGC GGCT GCGATCGG TGCGGGTTTACCGGT mreB 491720 - 492772 + | rod shape-determining protein MreB TERM 817 492801 - 492837 + F 100 -12.6 -4.34488 | gap 1, opp_overlap 492797 492795 TGATATGAATATTTA CGATGGATAATGG-CAT TCGA ATGTCCATTATCCATTG TTTATTATCAATCTC mreC 492889 - 493938 + | rod shape-determining protein MreC mreD 493938 - 494426 + | rod shape-determining protein MreD TERM 818 494484 - 494516 + G 72 -9.8 -2.87211 | gap 1, opp_overlap 494494 GATTTTAGACCGCTG C-CCGCCAGAATGCG TCCA CGCACACTGGCGGAG TATATCGGGCAAGCT APL_0438 494439 - 495779 + | recombination factor protein RarA TERM 819 495917 - 495930 + G 82 -8.1 -4.50976 | opp_overlap 495915 495916 CTGGCATTTATAACG GCACC GCTC GGTGC TTTTGTCGTATGGCG TERM 820 495987 - 496007 + G 84 -3.9 -5.43866 | TTTCTCATTCCGCCT TACTTGGCG TTG CGCTCGGTA TTTTTTTACAGATTG znuB 495860 - 496645 + | high-affinity zinc uptake system membrane protein ZnuB TERM 821 496762 - 496789 + F 84 -6.2 -5.252 | overlap 496766 TGCAACAATATATCC GTTAGGCCAGCT AGCC AGCTGGTCTTTC TTTTTTATCACCCTA TERM 822 496766 - 496785 + F 100 -10 -5.13354 | overlap 496762 ACAATATATCCGTTA GGCCAGCT AGCC AGCTGGTC TTTCTTTTTTATCAC TERM 823 496994 - 497008 + G 70 -7.8 -3.72893 | TCGACCGGGCGCATC TTCGCC GAT GGCGGA TTTAGTCGGACAATA APL_0440 496824 - 497621 + | hypothetical protein TERM 824 497672 - 497643 - T 86 -5 -5.63504 | opp_overlap 497644, overlap 497644 AATTCCATAAAAAAA TGACCGCTTG TTATTTATTG CAAGCGGTCT TTTTTTATCTGTTTT TERM 825 497671 - 497644 - T 82 -8.5 -3.96475 | opp_overlap 497644, overlap 497643 ATTCCATAAAAAAAT GACCGCTTG TTATTTATTG CAAGCGGTC TTTTTTTATCTGTTT TERM 826 497644 - 497671 + T 100 -10.6 -5.82281 | opp_overlap 497644 497643 ATTCCATAAAAAAAT GACCGCTTGTTA TTTA TTGCAAGCGGTC TTTTTTTATCTGTTT TERM 827 497687 - 497718 + T 73 -9 -3.2043 | gap 1, opp_overlap 497695, overlap 497695 TTTTTTTATCTGTTT TTAGCAAACGGAAAT TAG GTTTCCGTTTG-TAA TCCTTTTCTAATCAT TERM 828 497695 - 497711 + T 73 -7.3 -4.05816 | opp_overlap 497695, overlap 497687 TCTGTTTTTAGCAAA CGGAAAT TAG GTTTCCG TTTGTAATCCTTTTC metX 498777 - 497701 - | homoserine O-acetyltransferase TERM 829 498766 - 498780 + g 72 -6.4 -4.28361 | opp_overlap 498760 TGAAAAAAGGGTAAT GCTATG CGC CATGGC TTTTCCTAAGGTTAC sanA 499069 - 499758 + | SanA protein TERM 830 499834 - 499854 + F 100 -10.5 -5.60993 | GTTATTATTTTTTAA GCTGATTCA TTT TGAATCGGC TTTTTTTATAAAGCG TERM 831 499983 - 499993 + F 79 -4 -5.44119 | opp_overlap 499974 499983 GTAACATATAAAGTA TAGA TAA TCTA TTTTTTTGAAGTAAG TERM 832 502727 - 502714 - g 71 -2.4 -5.12971 | overlap 502703 502720 AACAGTTAATAAAAA TAGC AATAAA GCTA ACTTTATCAACGGTA TERM 833 505110 - 505100 - g 74 -6.8 -4.32048 | opp_overlap 505100 505098, overlap 505101 CAAGAACAGTTAAAA TCCG TTT CGGA TGTTGTGCAAAACGG TERM 834 506411 - 506396 - g 76 -2.6 -5.28176 | gap 1, overlap 506385 GTTATTCAGAAAAAA CTGAACG AAA CGTT-AG CGATTAAAGGCAACT TERM 835 510007 - 509984 - g 74 -6.8 -4.32482 | AGTGATAACGGAAAA GTTATCTTGA AACT TCAAGGTAAC GCTAATACACGAGGC APL_0443 500018 - 510061 + | autotransporter adhesin TERM 836 510086 - 510120 + T 83 -11.1 -3.03505 | gap 1, opp_overlap 510089 510095, overlap 510095 TCTTGTAGCTTAACT TAATAAAAATGCAGTC TTCG GACTGCATTTTT-TTA TGCTCTTTTTCGGTT TERM 837 510118 - 510089 - T 86 -10.9 -3.18274 | opp_overlap 510086 510095, overlap 510095 TGTAGCTTAACTTAA TAAAAATGCAGTC TTCG GACTGCATTTTTT TATGCTCTTTTTCGG TERM 838 510112 - 510095 - T 100 -9.9 -5.13741 | opp_overlap 510086 510095, overlap 510089 TTAACTTAATAAAAA TGCAGTC TTCG GACTGCA TTTTTTTATGCTCTT TERM 839 510095 - 510112 + T 100 -9.9 -5.70829 | opp_overlap 510095 510089, overlap 510086 TTAACTTAATAAAAA TGCAGTC TTCG GACTGCA TTTTTTTATGCTCTT TERM 840 510295 - 510346 + T 87 -9.6 -3.93695 | opp_overlap 510302, overlap 510299 510302 ATAGGTTATTTGTAA TAAATAAGCGGTCTGATTTGCAAA AAAT TTAACAAATCAGACCGCTTGTCCA TTTATAAATAATGGA TERM 841 510299 - 510342 + T 95 -14.8 -2.71325 | opp_overlap 510302, overlap 510295 510302 GTTATTTGTAATAAA TAAGCGGTCTGATTTGCAAA AAAT TTAACAAATCAGACCGCTTG TCCATTTATAAATAA TERM 842 510339 - 510302 - T 100 -16.5 -4.20768 | opp_overlap 510299 510295 510302 ATTTGTAATAAATAA GCGGTCTGATTTGCAAA AAAT TTAACAAATCAGACCGC TTGTCCATTTATAAA TERM 843 510302 - 510339 + T 100 -14.3 -3.50047 | opp_overlap 510302, overlap 510299 510295 ATTTGTAATAAATAA GCGGTCTGATTTGCAAA AAAT TTAACAAATCAGACCGC TTGTCCATTTATAAA APL_0444 511068 - 510370 - | hypothetical protein ykgF 512606 - 511197 - | putative electron transport protein TERM 844 512363 - 512352 - G 73 -3.6 -5.00616 | GGTTTCTGCAAAAAA GACG TGGC CGCC GTTTTGAGTCACCTT ykgE 513341 - 512616 - | putative dehydrogenase subunit TERM 845 513038 - 513016 - G 86 -12 -2.9348 | opp_overlap 513016 GTTAAATCGTATAGA CGTGCGGCAA TTT TTTCCGCACG TTTCGCCCATTCCGG TERM 846 513016 - 513038 + g 93 -12 -3.57561 | opp_overlap 513016 GTTAAATCGTATAGA CGTGCGGCAA TTT TTTCCGCACG TTTCGCCCATTCCGG TERM 847 513429 - 513397 - R 72 -5 -4.7416 | gap 1, opp_overlap 513400 513405, overlap 513388 513400 513405 TTAAAATGCCAAAAA TGACAAAAGGAAGTC AGCT GACTTCCTTTTA-CT TAATATAGGTAGAAA TERM 848 513427 - 513400 - R 89 -12.2 -3.26839 | opp_overlap 513400 513405, overlap 513388 513397 513405 AAATGCCAAAAATGA CAAAAGGAAGTC AGCT GACTTCCTTTTA CTTAATATAGGTAGA TERM 849 513400 - 513427 + r 75 -10 -2.5655 | opp_overlap 513388 513400 513397 513405, overlap 513405 AAATGCCAAAAATGA CAAAAGGAAGTC AGCT GACTTCCTTTTA CTTAATATAGGTAGA TERM 850 513422 - 513405 - R 100 -9.9 -4.72556 | opp_overlap 513400 513405, overlap 513400 513397 CCAAAAATGACAAAA GGAAGTC AGCT GACTTCC TTTTACTTAATATAG TERM 851 513405 - 513422 + r 100 -9.9 -4.4773 | opp_overlap 513405 513400 513397, overlap 513400 CCAAAAATGACAAAA GGAAGTC AGCT GACTTCC TTTTACTTAATATAG lctP 515106 - 513511 - | putative L-lactate permease TERM 852 515268 - 515284 + r 87 -2.3 -6.09196 | overlap 515258 AATAACCATTAAAAT TAGTGGA GTT TTTACTA TTTTTTTGTTTTAAC TERM 853 515554 - 515530 - R 100 -10.1 -6.11229 | opp_overlap 515530 AGTAAAATAAAAAAA CGGGATTAATA TTA TATTAGTCCCG TTTTTTATGATGAAA TERM 854 515530 - 515554 + r 100 -12.3 -5.31275 | opp_overlap 515530 AGTAAAATAAAAAAA CGGGATTAATA TTA TATTAGTCCCG TTTTTTATGATGAAA hns 515979 - 515572 - | DNA-binding protein H-NS TERM 855 515730 - 515757 + g 75 -8.6 -3.79113 | gap 1, overlap 515730 CACGTTTCTTGTGTT C-CGTGGCATTAT TCA ATAATGCTACGAG TTCTTCTGCCGAGAT APL_0449 516537 - 518054 + | putative integral membrane protein TERM 856 518077 - 518120 + F 100 -21.4 -5.66229 | opp_overlap 518080 TGCAATCCTTTTTGA CAAGCGGTGAAATTTGTAAG AATT TTTGCAAATTTCACCGCTTG TTTTTTATTGTTGCT TERM 857 518117 - 518080 - f 95 -14.4 -3.29043 | opp_overlap 518077 AATCCTTTTTGACAA GCGGTGAAATTTGTAA GAATTT TTGCAAATTTCACCGC TTGTTTTTTATTGTT mglB 518260 - 519231 + | D-galactose-binding periplasmic protein precursor sucD 520238 - 519366 - | succinyl-CoA ligase [ADP-forming] subunit alpha sucC 521407 - 520241 - | succinyl-CoA synthetase beta chain TERM 858 521520 - 521538 + r 71 -7.4 -3.63766 | opp_overlap 521520, overlap 521518 AAATCAAAGAAAAAA GACCGCTT GTA AAACGGTC TGTTATTTATGGCTA TERM 859 521538 - 521520 - R 100 -9.6 -5.74086 | opp_overlap 521520 521518 AAATCAAAGAAAAAA GACCGCTT GTA AAACGGTC TGTTATTTATGGCTA APL_0453 522417 - 521551 - | hypothetical protein TERM 860 521986 - 521999 + g 71 -3.1 -5.07053 | gap 1, opp_overlap 521985 521986, overlap 521986 521998 TGTTAATAAATAAAC G-AGCC GGC GGCTGC TTTTTTGGCGTAATT TERM 861 522276 - 522293 + g 73 -9.9 -2.93785 | CGGAAAGTTCAGGGT GTCGGTT TGCA AACCGAC TAAATTTTTTGACTT TERM 862 522538 - 522511 - R 100 -12.9 -5.00616 | overlap 522493 CTTTCTTGCAAAAAA TAACCGCTTGT TTAAGT ACAAGCGGTTA AAAATGAGTGTAAAA sucB 523789 - 522560 - | dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex (E2) TERM 863 523271 - 523286 + g 70 -7.6 -3.71686 | opp_overlap 523273 ACGAGCGGAGTAAGC TACGGT ACTT ACCGTA TTGTGTTCGCTTGCC kgd 526719 - 523909 - | alpha-ketoglutarate decarboxylase TERM 864 524054 - 524082 + g 74 -8.1 -3.9461 | opp_overlap 524062, overlap 524062 TCAAAATTATGTTTA CTGCAATACCATG CGC CTTGGTTTTGCGG TTCTTCTTGACACCA znuC 527762 - 526962 - | high-affinity zinc uptake system ATP-binding protein ZnuC TERM 865 528247 - 528217 - g 71 -3.3 -4.98436 | overlap 528219 CGAAGACGAGAAAAA TTCGGAATTAACC GCAGA AGATAATTCCGCA ACCTCTTATGATGAT TERM 866 529119 - 529133 + G 71 -10 -2.72991 | overlap 529121 529129 GAACGCCGATTATCG CACCGT CGG ACGGTG TGGTTGAACATATCG APL_0457 527966 - 529456 + | metalloprotease TERM 867 530017 - 530005 - g 76 -7.7 -4.1196 | AACCGATGCGGAAAA CGGTA CTT TACCG AAAGAAGTAAAAACA dsbC 529475 - 530170 + | thiol:disulfide interchange protein DsbC precursor TERM 868 530188 - 530232 + F 100 -15.3 -4.99043 | opp_overlap 530188 530191 530210 TTAAGTCCTTGAATA CAAGCGGTCTGATTTTGTAAA ATT TTTGCAAAATGATACCGCTTG TTTTATTTATAACGA TERM 869 530232 - 530188 - f 88 -13.1 -3.03159 | opp_overlap 530188, overlap 530191 530210 TTAAGTCCTTGAATA CAAGCGGTCTGATTTTGTAAA ATT TTTGCAAAATGATACCGCTTG TTTTATTTATAACGA TERM 870 530229 - 530191 - f 77 -9 -3.65991 | opp_overlap 530188, overlap 530188 530210 AGTCCTTGAATACAA GCGGTCTGATTTTGTAAA ATT TTTGCAAAATGATACCGC TTGTTTTATTTATAA TERM 871 530651 - 530667 + G 79 -6.6 -4.67697 | TGCGGATTTGGTCAT TACCGT GGATA ACGGTA TTTCTTCTTTTGAAG recJ 530220 - 531977 + | single-stranded-DNA-specific exonuclease RecJ plpD 532111 - 532962 + | lipoprotein Plp4 TERM 872 532996 - 533015 + F 100 -10.8 -5.24449 | opp_overlap 532995 532994 CTGGAGTAAAATAGG GGCTACTT TATA AAGTAGCC TTTTTTACGTTTATG APL_0461 533044 - 533862 + | HAD superfamily hydrolase TERM 873 535534 - 535520 - g 70 -3.5 -4.77438 | gap 1, opp_overlap 535520 ATTCAGTATTAAAAA CCGTCC GGAA GG-CGG TGTTGAAGTAGTGGT narQ 533862 - 535577 + | nitrate/nitrite sensor protein NarQ APL_0463 535600 - 536118 + | sortase and related acyltransferases APL_0464 536159 - 536755 + | putative deoxyribonucleotide triphosphate pyrophosphatase APL_0465 536783 - 537103 + | hypothetical protein TERM 874 537190 - 537172 - T 100 -11.7 -5.26316 | opp_overlap 537172 TTATCCTATAAAAAA TCCCCGC ATTTG GCGGGGA TTTTTGTAAGCGTTA TERM 875 537172 - 537190 + T 100 -11.7 -4.8543 | opp_overlap 537172 TTATCCTATAAAAAA TCCCCGC ATTTG GCGGGGA TTTTTGTAAGCGTTA fhs 538879 - 537209 - | formate--tetrahydrofolate ligase TERM 876 537331 - 537320 - G 72 -7.2 -4.06562 | AATCGCAACGATAAA GCCG GCAC CGGC AGAGACGCTAATACT TERM 877 538902 - 538913 + H 73 -4.4 -5.00616 | opp_overlap 538902 TCCAAAAAAATAAGC GCAA ACGT TTGC TTTTTTAAAACCCCG APL_0467 538989 - 539435 + | hypothetical protein TERM 878 539438 - 539488 + F 100 -20.2 -4.17516 | opp_overlap 539441 539444, overlap 539441 TGATGAGGTTTAAGC TAACAAGCGGTTGTATTTTGTGAA AAA TTTGCAAAATATGACCGCTTGTTA TTTATATGATTTAAA TERM 879 539441 - 539485 + F 100 -17.5 -4.19324 | opp_overlap 539441 539444, overlap 539438 TGAGGTTTAAGCTAA CAAGCGGTTGTATTTTGTGAA AAA TTTGCAAAATATGACCGCTTG TTATTTATATGATTT TERM 880 539485 - 539441 - f 73 -8.7 -3.17723 | opp_overlap 539441 539438, overlap 539444 TGAGGTTTAAGCTAA CAAGCGGTTGTATTTTGTGAA AAA TTTGCAAAATATGACCGCTTG TTATTTATATGATTT TERM 881 539844 - 539821 - g 70 -7.6 -3.70331 | gap 1, opp_overlap 539821, overlap 539819 AACCGATTTAAAAGA TTGGTATCAGA TGA TC-GATACCAA TATTAAAGGGCTTGT APL_0468 539525 - 540274 + | NADP-dependent dehydrogenase TERM 882 540251 - 540270 + F 71 -7.8 -3.63059 | overlap 540247 GCACAAACTTTCTCA CCACTTGC GGTG GCAAGAGG TTAATTTCTAACTTG TERM 883 540287 - 540311 + F 85 -9.3 -3.95153 | overlap 540288 540308 TAATTTCTAACTTGT TACCCCTCTTT GCT AAAGAGGGGAG TTTATAACTCATTGA TERM 884 540288 - 540310 + F 80 -10.6 -2.9661 | overlap 540287 540308 AATTTCTAACTTGTT ACCCCTCTTT GCT AAAGAGGGGA GTTTATAACTCATTG TERM 885 540405 - 540434 + F 72 -5.9 -4.30719 | opp_overlap 540410, overlap 540407 ACTTGCATATCGTGA AGTTATGTACTAT TTTA ATAGTACATAATA TTTATTATAGAGAGA TERM 886 540407 - 540432 + F 90 -10.7 -3.75817 | opp_overlap 540410, overlap 540405 TTGCATATCGTGAAG TTATGTACTAT TTTA ATAGTACATAA TATTTATTATAGAGA TERM 887 540573 - 540590 + G 72 -9.9 -2.74501 | opp_overlap 540573, overlap 540572 TGCTGCGCAAAATGA TCCGCTT TTCC AAGCGGA ATTTACCGACTTACT TERM 888 540590 - 540573 - g 74 -9.9 -3.08032 | opp_overlap 540573 540572 TGCTGCGCAAAATGA TCCGCTT TTCC AAGCGGA ATTTACCGACTTACT trpB 540457 - 541647 + | tryptophan synthase subunit beta trpA 541649 - 542458 + | tryptophan synthase subunit alpha TERM 889 542476 - 542531 + T 90 -12.2 -3.3879 | gap 1, opp_overlap 542476 542479, overlap 542479 542527 AAAATATCTCAATGA CAAGCGGTTAAATTCTCCGAAAAATTT GCA AAATTTAAAGGGGA-TTTAACCGCTTG TGTTTAAGCTGCATT TERM 890 542531 - 542476 - T 75 -10 -2.76651 | gap 1, opp_overlap 542476 542479 542527, overlap 542479 AAAATATCTCAATGA CAAGCGGTTAAATTCTCCGAAAAATTT GCA AAATTTAAAGGGG-ATTTAACCGCTTG TGTTTAAGCTGCATT TERM 891 542479 - 542528 + T 75 -8.1 -3.82946 | gap 1, opp_overlap 542476 542479, overlap 542476 542527 ATATCTCAATGACAA GCGGTTAAATTCTCCGAAAAATTT GCA AAATTTAAAGGGGA-TTTAACCGC TTGTGTTTAAGCTGC APL_0471 542828 - 542535 - | hypothetical protein APL_0472 543121 - 542837 - | hypothetical protein TERM 892 545203 - 545192 - g 86 -5.8 -5.40072 | overlap 545196 CTGTCTTGAAAAAAA CACC GAAA GGTG CGCCTTCTACCAATG polA 543301 - 546174 + | DNA polymerase I TERM 893 546208 - 546224 + F 76 -4.5 -5.15634 | opp_overlap 546208 AAAACAAACAGAATA TAAACAA AGT TTGTTTG TTTTTTGATAAGCTG TERM 894 546456 - 546466 + F 70 -4 -4.91459 | opp_overlap 546456, overlap 546447 TAACGCTCAAAAAGA TATC GAA GATA TTTTTGTGAATATTA lolA 546848 - 547489 + | outer-membrane lipoprotein carrier protein TERM 895 547503 - 547542 + F 100 -11.6 -4.20834 | opp_overlap 547523 AATCTAATTTTACTA GCGGTTTTATTTTCGCAA AATT TTGCCAAAATCAGACCGC TTTCCTTATTTTGGA trpR 547564 - 547872 + | Trp operon repressor TERM 896 548144 - 548130 - g 78 -7.2 -4.49981 | opp_overlap 548130 548137, overlap 548137 GAGATGATTATAAAA TCCAAT ATG ATTGGA TCAGTTTAGATAAAA mtgA 547901 - 548662 + | monofunctional biosynthetic peptidoglycan transglycosylase TERM 897 548663 - 548710 + T 95 -13 -3.5774 | opp_overlap 548668, overlap 548668 TTAGAAAAACTATAG AAAAAGCGGTGGAATTTGCAAA AGAA TTTGTAAACTTCACCGCTTTTA TTTGGGGGATTCAAT TERM 898 548668 - 548705 + T 100 -12.9 -4.87133 | opp_overlap 548668, overlap 548663 AAAACTATAGAAAAA GCGGTGGAATTTGCAAA AGAA TTTGTAAACTTCACCGC TTTTATTTGGGGGAT TERM 899 548705 - 548668 - T 100 -10.7 -5.07941 | opp_overlap 548668 548663 AAAACTATAGAAAAA GCGGTGGAATTTGCAAA AGAA TTTGTAAACTTCACCGC TTTTATTTGGGGGAT APL_0477 549067 - 548732 - | hypothetical protein APL_0478 550098 - 549094 - | hypothetical protein TERM 900 549650 - 549665 + g 76 -7.6 -4.11216 | opp_overlap 549662 GCCGGTGTTATTTGC GCCAAT TTAA ATTGGC TTTTGAAAATCCAGC APL_0479 550454 - 550113 - | hypothetical protein APL_0480 551808 - 550465 - | hypothetical protein APL_0481 552065 - 551853 - | hypothetical protein APL_0482 552220 - 552507 + | transcriptional regulator TERM 901 553257 - 553245 - g 74 -6.2 -4.48743 | opp_overlap 553244 AAAACCTTAAATAAA GCGG TGCGT CCGC ATATGTTACCGTTTT APL_0483 552582 - 553301 + | nitroreductase A TERM 902 554143 - 554125 - g 80 -8.8 -3.91911 | GGTATTGGAAGTAAA TGCCAGCC CGG GGCTGGAA GGGATTGAACAGGCA rimK 553298 - 554212 + | ribosomal protein S6 modification protein APL_0485 555005 - 554247 - | hypothetical protein maeB 555322 - 556590 + | NADP-dependent malic enzyme (NADP-ME) TERM 903 556629 - 556610 - f 85 -9.3 -3.92716 | opp_overlap 556610 TTAAAATAATTGAAA GAGGCGA GATTAT TCGCCTC TTTTTGTTTTGCATT TERM 904 556610 - 556629 + F 100 -10 -5.49568 | opp_overlap 556610 TTAAAATAATTGAAA GAGGCGAG ATTA TTCGCCTC TTTTTGTTTTGCATT TERM 905 556672 - 556656 - f 75 -5.1 -5.0133 | CATTTTGGTAAAAAA GTGCGTA GAA TATGCAC TCGGCTTTTTCAGCC TERM 906 556705 - 556722 + F 84 -5.5 -5.47159 | opp_overlap 556693 556705 AATTATTTTGTGAAA TAGCTGG GTCG CCTGCTA TTTTTTATATTCACG TERM 907 556737 - 556751 + F 83 -6.4 -4.98531 | ATTTTTTATATTCAC GGAACG TTA TGTTCC TTTTTACTTTAAGAG rplY 556776 - 557063 + | 50S ribosomal protein L25 TERM 908 557189 - 557215 + T 95 -8.8 -5.60689 | opp_overlap 557189 TTTAAGTGATTTAAA GGCTCTTTTGTA TAG TGCAAAAGGGTC TTTTTTATTATGTAA APL_0488 558263 - 557223 - | phage integrase family protein TERM 909 558519 - 558535 + r 80 -9.4 -3.67121 | opp_overlap 558519, overlap 558515 TTACTCCATAAAAAA GCCGGA TTATT TCCGGC TTGCTTTCATTTCTA TERM 910 558535 - 558519 - R 100 -9.4 -5.26316 | opp_overlap 558515 558519 TTACTCCATAAAAAA GCCGGA TTATT TCCGGC TTGCTTTCATTTCTA APL_0489 559046 - 558525 - | hypothetical protein APL_0490 559663 - 559253 - | hypothetical protein APL_0491 559897 - 559664 - | hypothetical protein APL_0492 560363 - 560157 - | hypothetical protein TERM 911 560389 - 560404 + r 73 -9 -3.31565 | opp_overlap 560389, overlap 560387 560384 TCAAAAACAACAAAA CCGCTA TTTC TAGCGG TCTTCGTATTGTTTA TERM 912 560404 - 560389 - R 95 -9 -5.16681 | opp_overlap 560389 560387 560384 TCAAAAACAACAAAA CCGCTA TTTC TAGCGG TCTTCGTATTGTTTA APL_0493 561120 - 560398 - | hypothetical protein TERM 913 561183 - 561164 - R 71 -8.6 -3.1355 | overlap 561168 561171 CTCAGCCATATCTAA CAAAGCAG ACTG CTGCCTTG CAATCATCTCCGCTC rdgC 562221 - 561319 - | recombination associated protein TERM 914 561411 - 561401 - G 82 -3.2 -5.5112 | overlap 561403 GCCATTAAGAAAAAA TCCG CAT CGAA ACGTTGAGCAACATC TERM 915 562259 - 562243 - R 77 -5.8 -4.8048 | opp_overlap 562243, overlap 562245 TCCTTACAGTAAAAA TCCCGC ACTTG GCGGAA CTTGTTATTAATTAT TERM 916 562290 - 562304 + r 83 -7.1 -4.7458 | opp_overlap 562290 TTTGGGTAATAAAAA CCGCT TAGTT AGCGG TTTATTTGTTGTCAT TERM 917 562304 - 562290 - R 88 -7.1 -5.06414 | opp_overlap 562290 TTTGGGTAATAAAAA CCGCT TAGTT AGCGG TTTATTTGTTGTCAT TERM 918 563111 - 563094 - R 77 -9.1 -3.15663 | opp_overlap 563091 563094 ACTTAGTGTGACTAA GCGGCTA ATGC CAGCCGC TCCATTTTTAACGGT TERM 919 563494 - 563468 - R 86 -5 -5.75342 | TTTTGTTAAAAAAAA GCCCCAATCCAA TAA CTAGAGAGGGGC GAGGAGGTCTTCCAT TERM 920 565279 - 565261 - R 100 -11.8 -5.6473 | opp_overlap 565261 ATAAGATGAAAAAAA GCTACGTT TAT AACGTAGC TTTTTTATTGGAAAA TERM 921 565261 - 565279 + r 100 -11.8 -5.4505 | opp_overlap 565261 ATAAGATGAAAAAAA GCTACGTT TAT AACGTAGC TTTTTTATTGGAAAA TERM 922 565360 - 565374 + r 71 -8.5 -3.06312 | opp_overlap 565360 565359 AGAGATACAATAAAG CCGCC ACGAA GGCGG TTAGATAGAAACTTT TERM 923 565374 - 565360 - R 73 -8.5 -3.25664 | opp_overlap 565360, overlap 565359 AGAGATACAATAAAG CCGCC ACGAA GGCGG TTAGATAGAAACTTT APL_0495 566190 - 565375 - | putative DNA-methyltransferase TERM 924 565662 - 565672 + g 73 -5.4 -4.60797 | opp_overlap 565662 CCAATTTATCAATTA TTGG CAG CCAA TTTTCTGTATCAAAA APL_0496 567878 - 566235 - | hypothetical protein APL_0497 568200 - 567934 - | hypothetical protein TERM 925 567973 - 567986 + g 79 -6.7 -4.58585 | ATGTTCTACCATTGT TCCGA TAAT TCGGA TTTCTTGTTTAAGTG TERM 926 568627 - 568644 + H 78 -7.1 -4.40298 | TCAATAAAAAATCTT TGTTAAG TTAT CTTAACA TTTATTGATTTAAGT APL_0498 568720 - 568908 + | hypothetical protein TERM 927 568912 - 568929 + F 83 -10.5 -3.32647 | opp_overlap 568912 TCAGGCAAATAAAAA CCGCCGT TGGT GCGGCGG TTAGTCTCATTGAAG TERM 928 568929 - 568912 - f 100 -9.8 -5.30616 | opp_overlap 568912 TCAGGCAAATAAAAA CCGCCG TTGGTG CGGCGG TTAGTCTCATTGAAG APL_0499 568967 - 569662 + | hypothetical protein APL_0500 569818 - 570690 + | hypothetical protein TERM 929 570947 - 570933 - g 72 -10 -2.80589 | overlap 570932 GAAAAATTTGTAAAG CAAGCG GTT CGCTTG ATGAATGAAAAACGT TERM 930 571116 - 571091 - g 70 -3.9 -4.77036 | CCCTATTACTAAAAA GCCAGTTGAGG ATAA CCCGAAATGGC AGATGTTTGCAGTAT APL_0501 570693 - 571217 + | DNA methylase TERM 931 571255 - 571273 + F 70 -7.3 -3.86346 | overlap 571257 CTGACAGATTGGTAT GTGCCGG ATTTA CCGGCTC TTTGTAGCGAGATGA TERM 932 571257 - 571271 + F 75 -8.5 -3.52113 | overlap 571255 GACAGATTGGTATGT GCCGG ATTTA CCGGC TCTTTGTAGCGAGAT APL_0502 571412 - 572434 + | hypothetical protein rusA 572506 - 572874 + | endodeoxyribonuclease RusA APL_0504 572867 - 573379 + | hypothetical protein TERM 933 573457 - 573481 + F 100 -14.3 -5.55769 | CGATTGAATTTTATA GCCCTGATGGT TTT GCCATCGGGGC TTTTTTATTCTCCAA APL_0505 573751 - 574293 + | putative endolysin APL_0506 574385 - 574756 + | hypothetical protein TERM 934 574950 - 574977 + F 73 -7.7 -3.89814 | opp_overlap 574953 574955, overlap 574955 ATAAGTAGCCACTAT CAAGAGGGAGC GTAATA GCCCCCTTTTG TGTTTTATATGCTAC TERM 935 574955 - 574972 + F 70 -4 -4.95843 | opp_overlap 574955 574953, overlap 574950 TAGCCACTATCAAGA GGGAGC GTAATA GCCCCC TTTTGTGTTTTATAT APL_0507 575285 - 575704 + | hypothetical protein TERM 936 577299 - 577288 - g 70 -5.8 -4.4009 | GTTTATTTGATAAAA GGTG ATAG CACC AAACGCAGTAAACTT APL_0508 575707 - 577824 + | bacteriophage tail assembly protein APL_0509 578045 - 579565 + | bacteriophage capsid protein TERM 937 579717 - 579737 + GF 73 -7.6 -3.84648 | gap 1, overlap 579720 ATCAATCTGCATATC CAC-TCGCC CGGA GGCGATGTG TTTGATGGTATTGCC TERM 938 579720 - 579733 + GF 70 -8.1 -3.31564 | overlap 579717 AATCTGCATATCCAC TCGCC CGGA GGCGA TGTGTTTGATGGTAT TERM 939 579779 - 579815 + GF 79 -10.3 -2.95656 | gap 1, opp_overlap 579788, overlap 579788 GCTGAAAAATCACCC TGCTAACAAGACCGTC TATATC GACGGTCTTGCT-GCA TCTATGGCTTCAGTT TERM 940 579807 - 579788 - gf 80 -9.3 -3.62046 | opp_overlap 579788 579779 TCACCCTGCTAACAA GACCGTC TATATC GACGGTC TTGCTGCATCTATGG TERM 941 579788 - 579807 + GF 77 -9.3 -3.21354 | opp_overlap 579788, overlap 579779 TCACCCTGCTAACAA GACCGTC TATATC GACGGTC TTGCTGCATCTATGG APL_0510 579501 - 581525 + | putative Clp-like protease TERM 942 581545 - 581569 + F 100 -9.4 -5.60689 | opp_overlap 581545 CAAATAACTTATAGA CCGTACTTTA ATCAA TAAGGTACGG TTTTTTATTATCTGA APL_0511 581599 - 581922 + | hypothetical protein TERM 943 582022 - 582051 + G 88 -10.1 -4.08216 | gap 1, opp_overlap 582026 582027 CCCTGCCGTTTACGA TGAAGCCCC-CAAA GTG TTTGAGGGGCTACA TTTTAACGAAGATAC TERM 944 582047 - 582026 - g 72 -9.5 -3.21099 | gap 1, opp_overlap 582022, overlap 582027 GCCGTTTACGATGAA GCCCC-CAAA GTG TTTGAGGGGC TACATTTTAACGAAG APL_0512 581915 - 582217 + | hypothetical protein TERM 945 582259 - 582242 - g 84 -11.3 -3.14261 | TAAAAATTGATGGAA TGGCGGA GATT TCCGCCA ATATCGCCAAACTGA APL_0513 582220 - 582747 + | putative phage tail component TERM 946 582763 - 582782 + G 74 -9.4 -3.34398 | opp_overlap 582763, overlap 582761 TTATTCATAGCCAAA TTCGAGAA GAAA TTCTCGAA TGTTTAAAACAAGCC TERM 947 582782 - 582763 - g 78 -9.4 -3.71873 | opp_overlap 582761 582763 TTATTCATAGCCAAA TTCGAGAA GAAA TTCTCGAA TGTTTAAAACAAGCC TERM 948 582819 - 582873 + G 77 -3.7 -5.1356 | gap 1, opp_overlap 582824, overlap 582820 582821 582824 AATGAAATTAACTGG TA-TAACGGCAGACCATCCTTTATCG ATAT TGATGAAGAACAGTCTGCCGTTGCTG TTTTTATTGATGAGG TERM 949 582820 - 582871 + G 71 -6.6 -4.19587 | opp_overlap 582824, overlap 582819 582821 582824 ATGAAATTAACTGGT ATAACGGCAGACCATCCTTTATCG ATAT TGATGAAGAACAGTCTGCCGTTGC TGTTTTTATTGATGA TERM 950 582821 - 582870 + G 74 -10.1 -3.10668 | opp_overlap 582824, overlap 582820 582819 582824 TGAAATTAACTGGTA TAACGGCAGACCATCCTTTATCG ATAT TGATGAAGAACAGTCTGCCGTTG CTGTTTTTATTGATG TERM 951 582824 - 582867 + G 78 -9.6 -3.66615 | opp_overlap 582824, overlap 582821 582820 582819 AATTAACTGGTATAA CGGCAGACCATCCTTTATCG ATAT TGATGAAGAACAGTCTGCCG TTGCTGTTTTTATTG TERM 952 582867 - 582824 - g 100 -13.3 -3.34005 | opp_overlap 582824 582821 582820 582819 AATTAACTGGTATAA CGGCAGACCATCCTTTATC GATATT GATGAAGAACAGTCTGCCG TTGCTGTTTTTATTG APL_0514 582744 - 583157 + | hypothetical protein TERM 953 583251 - 583226 - g 73 -2.5 -5.24551 | opp_overlap 583201, overlap 583230 TTAAACCAAGAAAAA GCCATTACCGC TTGT ACGGTAACACC TAATGCAACGATTAC APL_0515 583157 - 583813 + | hypothetical protein TERM 954 583827 - 583846 + F 82 -10 -3.70722 | opp_overlap 583827 583824 583829 AATTTCCCTAAACTA GACCGCTT GTAT AGGCGGTC TTATCTCTTGATCAA APL_0516 583872 - 584264 + | hypothetical protein APL_0517 584288 - 584563 + | hypothetical protein TERM 955 584892 - 584909 + F 100 -9.1 -5.64421 | opp_overlap 584892 AAATTTTCAAAAGAA GCTCGCA TTTT TGCGGGC TTTTTTATTTGGGGT TERM 956 584909 - 584892 - f 75 -6.9 -4.2018 | opp_overlap 584892 AAATTTTCAAAAGAA GCTCGCA TTTT TGCGGGC TTTTTTATTTGGGGT TERM 957 585586 - 585557 - g 70 -7.1 -3.76224 | opp_overlap 585557 CTGTTATGGAGCAAA CACCAGCATTAGC ACAA GCTATTGCAGATG GTTTAGGTGTGAGCG APL_0518 584929 - 588360 + | hypothetical protein TERM 958 588409 - 588377 - f 100 -12.9 -5.2696 | opp_overlap 588381, overlap 588381 TTAAAATTCAAAAAA GAAAGCCGAGATACT GCA AATATCTCGGCTTTT TTATTCCCTAAATAT TERM 959 588381 - 588405 + F 100 -11.5 -5.4833 | opp_overlap 588381 588377 AATTCAAAAAAGAAA GCCGAGATACT GCA AATATCTCGGC TTTTTTATTCCCTAA TERM 960 588405 - 588381 - f 100 -13.7 -5.08015 | opp_overlap 588381, overlap 588377 AATTCAAAAAAGAAA GCCGAGATACT GCA AATATCTCGGC TTTTTTATTCCCTAA TERM 961 588548 - 588562 + F 73 -8.6 -3.25102 | overlap 588547 TTTCATTGTTTTAAT TTGGCA ATT TGCCAA TATTCTAAATGCGAT TERM 962 588791 - 588777 - g 82 -5 -5.29208 | opp_overlap 588782, overlap 588781 AAAATAAAAAACAAA GAATCG GTA CAATTC CGCGGCTTTATGAAA TERM 963 588782 - 588827 + G 73 -3.5 -5.07652 | gap 3, opp_overlap 588777 588781 588809, overlap 588802 588809 AAAAAACAAAGAATC GGTAC-AATTCCG-CG-GCTTT ATGAA AGAGCACGGCGGAGTTCGTGCC TTTTATTTTAAGGAC APL_0519 588612 - 588947 + | phage minor tail protein TERM 964 589528 - 589509 - f 72 -9.3 -2.60492 | opp_overlap 589509, overlap 589508 TAAATAATCATTAAT GCCCCTT GACTCA AAGGGGC TTTTTTATTACCATT TERM 965 589509 - 589528 + F 100 -9.3 -5.4756 | opp_overlap 589509 589508 TAAATAATCATTAAT GCCCCTT GACTCA AAGGGGC TTTTTTATTACCATT TERM 966 589989 - 589964 - g 73 -10.5 -2.52451 | overlap 589963 589962 589967 AAACAAGGTAAAATT CAACTGTTGTG ATAT CGCAACAGTTG GGGCTGACGGCAAAA APL_0520 589800 - 590663 + | hypothetical protein TERM 967 590687 - 590718 + F 87 -11.7 -3.21099 | gap 1, opp_overlap 590686 590685 GATTTTAATCAAATC CGACCGCTTGTAGC CTTGA GTTACAAGCGG-CG TTAGTGCTACAAACA TERM 968 590738 - 590763 + F 100 -11.9 -5.24129 | opp_overlap 590736 TGCTACAAACAATTC GCCCTGACGAT CAAT ATCGTTGGGGC TTTTTTATAGGAGAA APL_0521 590784 - 591521 + | phage-related minor tail protein L TERM 969 591579 - 591597 + F 82 -7.4 -4.63048 | opp_overlap 591579 CGCTAGTGAATGTAA GCCGCA CGAATGT TGCGGC TTTGTTGTTTCTAGC APL_0522 591682 - 592296 + | phage-related tail assembly protein K APL_0523 592320 - 592841 + | putative phage tail assembly protein TERM 970 593096 - 593075 - f 78 -10.3 -2.69288 | overlap 593071 AGAATGAATAATGTA TTTTGCGAT TGAG ATCGCAAAA AAAACAAATAGAGCA TERM 971 593115 - 593101 - f 90 -3.6 -5.79526 | opp_overlap 593109, overlap 593107 593109 AGATCGCAAAAAAAA CAAATA GAG CATTTG TGAAGAGATTCGCAA TERM 972 593109 - 593134 + F 100 -9.1 -5.93252 | opp_overlap 593101 593109 593107 AAAAAAACAAATAGA GCATTTGTGAA GAGA TTCGCAAGTGC TTTTTTATTTTTAGG TERM 973 593284 - 593295 + G 90 -5.8 -5.55664 | opp_overlap 593284 AGGTCCTGTAAACAA GTGG AAAT CCAC TTTTTTTGATAATAC TERM 974 595889 - 595847 - g 70 -7.3 -3.80858 | opp_overlap 595847 CAAGACGAAGCTAAA GTACGT-AGTACTGCTGTAAC TCA GTTACAACAA-ACTGACGCAC AACAAGCACAGCTTA TERM 975 597703 - 597731 + G 100 -11.7 -4.17762 | opp_overlap 597703, overlap 597705 TAAAACTCAAGTAAT TGCTGGCGGTCGT AAA GCGATCGCCGGTA TTGTTTTGGGGGCTG TERM 976 597705 - 597729 + G 93 -12.1 -3.68435 | opp_overlap 597703, overlap 597703 AAACTCAAGTAATTG CTGGCGGTCGT AAA GCGATCGCCGG TATTGTTTTGGGGGC APL_0524 593159 - 598756 + | phage tail protein TERM 977 598785 - 598764 - f 83 -10.9 -3.03474 | opp_overlap 598764 TTGCATAACCACATA GCTCAAGCA GAAA TGCCTGAGC TTTTTTATTATCCAA TERM 978 598764 - 598785 + F 95 -8.7 -5.55769 | opp_overlap 598764 TTGCATAACCACATA GCTCAAGCA GAAA TGCCTGAGC TTTTTTATTATCCAA APL_0525 598815 - 599156 + | hypothetical protein TERM 979 599591 - 599566 - f 77 -9.2 -3.20227 | opp_overlap 599566, overlap 599564 TGTGAATTAGTAAGA GGATTAAGTT TTTCGG AACTTAATCC TTTTTTATTTGCCAA TERM 980 599566 - 599591 + F 100 -9.9 -5.63517 | opp_overlap 599566 599564 TGTGAATTAGTAAGA GGATTAAGTTT TTCG GAACTTAATCC TTTTTTATTTGCCAA TERM 981 599598 - 599641 + F 78 -10.5 -2.74263 | opp_overlap 599610 599633, overlap 599597 ACTTAATCCTTTTTT ATTTGCCAATAATTAGCCG AACAAG CGGTTAAATATTGGCAAAA CTTTGCAAATCCGCT TERM 982 600091 - 600070 - f 79 -8.7 -3.73224 | opp_overlap 600070 TTATTTTTTAGGAAA GCGAACAGG GTAA CTTGTTCGC TTTTTGTTTTTTATA TERM 983 600070 - 600091 + F 100 -10.9 -5.8096 | opp_overlap 600070 TTATTTTTTAGGAAA GCGAACAGG GTAA CTTGTTCGC TTTTTGTTTTTTATA TERM 984 600224 - 600214 - g 81 -4 -5.27023 | ATCTTAAAAATAAAA TTCT AGT AGAA GGAACGAACCTGAAA APL_0526 600117 - 600758 + | hypothetical protein TERM 985 600925 - 600937 + G 91 -7.7 -4.8667 | overlap 600904 AGCCGGTATTACCTT GCTGA TTA TCAGC TTTTTATACGGTGTA APL_0527 600881 - 601744 + | ABC transporter permease TERM 986 603017 - 603004 - g 75 -5.3 -4.8048 | TCGTTATATCAAAAA CAAAC CTTG GTTTG TGTGGGCTTTCCGTG APL_0528 601844 - 603292 + | putative transporter TERM 987 603322 - 603347 + F 100 -9.1 -5.36441 | opp_overlap 603322 GCATTAGCTAAAGAA GCGATAATATC TTAT GGTGTTATCGC TTTTTTATATCCGGC TERM 988 603357 - 603374 + F 73 -4.1 -4.89562 | TATCGCTTTTTTATA TCCGG CGATAAGT CCGGA TTTTGTTAATTTTGA TERM 989 603421 - 603434 + F 84 -5.3 -5.40072 | overlap 603404 603413 TGCCGATTAAATCTG TGAGA TTTC TCTCA TTTTTTTAAGCAAAC TERM 990 605070 - 605088 + G 79 -6.8 -4.65032 | overlap 605065 TTTGCCGCTTTAACC GTGTTATT ACT AATGACAC TTTGTTTGTACTTTA APL_0531 604407 - 605156 + | putative ABC transporter permease protein APL_0532 605200 - 605481 + | molybdopterin/thiamine biosynthesis dinucleotide-utilizing protein TERM 991 605760 - 605770 + G 71 -6.8 -4.08692 | overlap 605765 605766 TAATCTAAATTGTCG CACC GCC GGTG TTTTAGCACCGATTG thiF 605569 - 605949 + | molybdopterin/thiamine biosynthesis dinucleotide-utilizing protein thiS 605980 - 606180 + | thiamine biosynthesis protein ThiS TERM 992 606241 - 606225 - f 70 -2.2 -5.26918 | overlap 606226 ACATTTTAGAAAAAA TCCTTC ACTCG GAAGGC ATATAGATAAGGAAA TERM 993 606368 - 606343 - f 76 -9.9 -2.82668 | overlap 606342 TTTCAAATCCTAAAG TGATGCAACAA AGTA TTGTTACATCA GGTTCCCAGCTTGCA thiG 606616 - 607026 + | thiazole biosynthesis protein ThiG TERM 994 608038 - 608021 - g 76 -7.7 -4.09685 | GCGCAGGCTCGAAAA CACAGCC GGGC GGCTATG CGGAAGAAGACGATA thiH 607036 - 608181 + | thiazole biosynthesis protein ThiH TERM 995 608364 - 608381 + G 71 -8.4 -3.51934 | opp_overlap 608359, overlap 608362 TCTTTATCAATATTG CCGAGC ATTATC GCTCGG TGTTTATAAAGCGGA TERM 996 608597 - 608617 + G 71 -9.7 -2.57564 | overlap 608596 CCGATCTATTTATGG CGATAGCAC CTT GTGCAATCG GTTATGCGGAAATCG APL_0537 608236 - 608859 + | putative transcriptional activator APL_0538 608882 - 609826 + | putative ABC transporter substrate-binding protein TERM 997 610197 - 610187 - g 73 -8.2 -3.59315 | opp_overlap 610187 610186, overlap 610179 GTAATGATCGCCAAA GGCG GTG CGCC GTTATTACAACAAAA thiD 609992 - 610450 + | phosphomethylpyrimidine kinase TERM 998 610813 - 610830 + G 70 -7.7 -3.58177 | overlap 610808 ACGGAGTGGACGGCA TCGCGGT TATC ACTGCGA TTAGTTTAGCTTCTG thiE 610464 - 610877 + | thiamine monophosphate synthase TERM 999 610890 - 610946 + F 100 -11.2 -5.4588 | gap 1, opp_overlap 610894 610923, overlap 610891 TAATTTTGCTCTTAT ACAAGCGGTC-TTTTTTCAAGATTTTT TGCA AAATTTCTTGGAAAAACGACCGCTTGC TTTTTTGTGCTTTTC TERM 1000 610891 - 610945 + F 100 -14.7 -3.85088 | gap 1, opp_overlap 610894 610923, overlap 610890 AATTTTGCTCTTATA CAAGCGGTC-TTTTTTCAAGATTTTT TGCA AAATTTCTTGGAAAAACGACCGCTTG CTTTTTTGTGCTTTT TERM 1001 610942 - 610894 - f 72 -8.4 -3.48276 | gap 1, opp_overlap 610891 610890, overlap 610923 TTTGCTCTTATACAA GCGGTCTTTTTT-CAAGATTTTT TGCA AAATTTCTTGGAAAAACGACCGC TTGCTTTTTTGTGCT TERM 1002 611606 - 611593 - g 91 -6.7 -5.42862 | overlap 611595 ACATCGTGAAAAAAA TTCCG GCAC CGGAA GGCGATCCCGATGCG lepA 611049 - 612848 + | GTP-binding protein LepA TERM 1003 612994 - 613037 + G 79 -7.7 -4.28067 | gap 2, opp_overlap 613008 TATCGCAATTTTATA TGGTGTTTGG-AAC-ACATTG GATT CAATGCAGTTACCGAACACCA TTTCTATATTATTGG TERM 1004 613403 - 613392 - g 70 -7.2 -3.76393 | ATACTTTAATTGAAA CCGG TCAT CCGG AACGTGGCGATGTGA lepB 612953 - 613912 + | Signal peptidase I TERM 1005 613933 - 613981 + F 88 -7.5 -5.1517 | opp_overlap 613933 613935, overlap 613962 GAGCGAAGTACATCA TACAAGCGGGTCTTTTTTGTCAA AAA TCGGCAAAATACGACCGCTTGTA TTTTTGCTTTGTTTT TERM 1006 614323 - 614307 - g 74 -5 -4.8622 | overlap 614308 CGGGCGAATTAAAAA GCGGCG GTTAT CGCCGT GAATCGATTCTTTCC TERM 1007 614322 - 614308 - g 71 -8.5 -3.5125 | overlap 614307 GGGCGAATTAAAAAG CGGCG GTTAT CGCCG TGAATCGATTCTTTC rnc 614009 - 614680 + | ribonuclease III era 614750 - 615664 + | GTP-binding protein Era recO 615674 - 616396 + | DNA repair protein RecO TERM 1008 616417 - 616461 + T 100 -18.2 -4.24534 | opp_overlap 616420, overlap 616420 AAAAAAGAGTAAATA AAAGCGGTCTGAATTTGTAA AAATC TTGCAAATTCAGACCGCTTA TTTGTATATTGATTC TERM 1009 616420 - 616458 + T 100 -19.9 -4.21954 | opp_overlap 616420, overlap 616417 AAAGAGTAAATAAAA GCGGTCTGAATTTGTAA AAATC TTGCAAATTCAGACCGC TTATTTGTATATTGA TERM 1010 616458 - 616420 - T 100 -18.4 -5.00923 | opp_overlap 616420 616417 AAAGAGTAAATAAAA GCGGTCTGAATTTGTAAA AAT CTTGCAAATTCAGACCGC TTATTTGTATATTGA tadG 618049 - 616487 - | tight adherence protein G TERM 1011 617494 - 617510 + g 71 -4.5 -4.70266 | CCATTAAATCAATCG GAATATT AAA AGTATTC TTTTTAAATGCTCTT tadF 618669 - 618073 - | tight adherence protein F tadE 619126 - 618641 - | tight adherence protein E TERM 1012 618922 - 618944 + gr 76 -2.6 -5.39755 | overlap 618924 TGTCGTTAAACAATT TTTGGTAGTC GCT GCCTGCCGGA TTTTTTCTAGTTGTG TERM 1013 619072 - 619049 - GR 83 -8.2 -4.37157 | AAGCACGAGAATAAA GAGTCCAATC GTTA GACTGAACTC AATAGTTGCAACGCC tadD 619881 - 619129 - | tight adherence protein D tadC 620716 - 619871 - | tight adherence protein C tadB 621603 - 620716 - | tight adherence protein B TERM 1014 621485 - 621511 + g 79 -3.1 -5.29742 | gap 1, overlap 621487 621488 621489 GTCGTTTTATTCAGT TTCTCGGTGAAA CCGG TTTCAC-GAGCA TTTATTTTTTTATGT tadA 622880 - 621603 - | tight adherence protein A TERM 1015 622718 - 622708 - G 71 -8.2 -3.49102 | overlap 622697 622694 622709 AGACCCGCCATATAA GCGG CGT CCGC CGGTGTAAGATAAAT tadZ 624016 - 622889 - | flp operon protein D TERM 1016 623463 - 623497 + g 80 -2.9 -5.4251 | opp_overlap 623466, overlap 623482 AGATCCAAATCTTGA GAACCGTTATTAC CTTGAGCCA GTAATACCGGTAC TTTTTTCTCTGTAGA rcpB 624682 - 624179 - | rough colony protein B rcpA 626067 - 624679 - | rough colony protein A TERM 1017 625266 - 625282 + g 72 -6.5 -4.36586 | TGGAAATATTCGGTT CGGCGAG AAT TTTGCCG TTGTTTTGATTATCT TERM 1018 625937 - 625917 - G 74 -6.9 -4.24342 | opp_overlap 625916, overlap 625913 CTTCGGATGAAGAAA CGAAAATCG TAT CGATTTTGG CATTGGTTTTGATTA rcpC 626875 - 626057 - | flp operon protein C tadV 627332 - 626904 - | flp operon protein B flp2 627568 - 627377 - | minor fimbrial protein flp1 627858 - 627628 - | fimbrial protein Flp precursor TERM 1019 628205 - 628229 + H 87 -13.1 -2.64933 | opp_overlap 628211, overlap 628207 628211 TTCTGTTGGTATGTA TATAAACTGGT TCG ACCAGTTTATA TAGTATAAGTAAATC TERM 1020 628207 - 628227 + H 83 -11.3 -2.8655 | opp_overlap 628211, overlap 628205 628211 CTGTTGGTATGTATA TAAACTGGT TCG ACCAGTTTA TATAGTATAAGTAAA TERM 1021 628223 - 628211 - H 76 -7.7 -4.0641 | opp_overlap 628211 628207 628205 TGGTATGTATATAAA CTGGT TCG ACCAG TTTATATAGTATAAG TERM 1022 628211 - 628223 + H 78 -7.7 -4.11404 | opp_overlap 628211, overlap 628207 628205 TGGTATGTATATAAA CTGGT TCG ACCAG TTTATATAGTATAAG TERM 1023 628396 - 628375 - H 78 -2.3 -5.75538 | TTCAAAAAAGAAAAA GAACCCT TTCTACTC AAGGTTC TGCGACTATGTTATG rhlB 628451 - 629671 + | ATP-dependent RNA helicase RhlB TERM 1024 629680 - 629667 - f 77 -5.3 -4.85545 | ATCAAACGAAGAAAA GATAG TCTG CTATC TCAATATAATAACTA TERM 1025 629711 - 629739 + F 100 -10.4 -4.73388 | AACTTGTTTCTGCAA GCGGTCGGATTT CTTGT AAATTTGACCGC TTTTTACTGAAACTT APL_0561 629789 - 630211 + | hypothetical protein TERM 1026 630953 - 630972 + G 79 -3.4 -5.25772 | AGAAGTTAATTAATT CGCCGCGT ATGT ACGGTGCG TTTTTATTGTGGTTT APL_0562 630262 - 631746 + | hypothetical protein TERM 1027 631774 - 631822 + F 100 -18.6 -4.68705 | gap 1, opp_overlap 631779 631797, overlap 631775 631776 AACGATATTGCCTAT TA-CAAGCGGTCGTTTTTGTGAA ATTT TTTGCAAAAACGACCGCTTGCTA TTTTATTGAAATTAT TERM 1028 631775 - 631820 + F 100 -19.3 -3.9504 | opp_overlap 631779 631797, overlap 631774 631776 ACGATATTGCCTATT ACAAGCGGTCGTTTTTGTGAA ATTT TTTGCAAAAACGACCGCTTGC TATTTTATTGAAATT TERM 1029 631776 - 631819 + F 100 -22.8 -2.9594 | opp_overlap 631779 631797, overlap 631775 631774 CGATATTGCCTATTA CAAGCGGTCGTTTTTGTGAA ATTT TTTGCAAAAACGACCGCTTG CTATTTTATTGAAAT TERM 1030 631816 - 631779 - f 100 -14.3 -3.4072 | opp_overlap 631776 631775 631774, overlap 631797 TATTGCCTATTACAA GCGGTCGTTTTTGTGAA ATTT TTTGCAAAAACGACCGC TTGCTATTTTATTGA afuA_2 631946 - 632977 + | Fe3+ ABC transporter, iron-binding protein TERM 1031 633059 - 633082 + F 91 -5.3 -5.81412 | opp_overlap 633063, overlap 633063 AAATTTAACCGCTTA TAAACCACG CTATGC CGTGGTTTC TTTTTTTTGAATAGC TERM 1032 633063 - 633078 + F 84 -6.1 -5.33985 | opp_overlap 633063, overlap 633059 TTAACCGCTTATAAA CCACG CTATGC CGTGG TTTCTTTTTTTTGAA TERM 1033 633517 - 633535 + G 82 -2.4 -5.58522 | GTGAGCTTGTTAGTA GTGATATT GAC GATAGCAC TTTTTATTTTATATC TERM 1034 633735 - 633747 + G 85 -4.1 -5.55698 | AAGCAAACGTACCCG CTTGC TCA GTAAG TTTTTTTCGGTTCTG TERM 1035 634368 - 634378 + G 74 -6.8 -4.35518 | ACTCGCCGTGTGGGT CGGT TTT ACCG TTTTGCTGTACGGTT TERM 1036 634926 - 634944 + G 73 -3.9 -4.98531 | TGTTCGTTCTATGAC TACGATT AGTGC GATCGTA TTTTTAGTTTCACCA afuB_2 633109 - 635109 + | ferric transport system permease protein TERM 1037 635127 - 635182 + F 100 -13.9 -5.10029 | gap 2, opp_overlap 635130 TTTATAGATTTTTAA CAAGCGGTTATTTTTA-TTC-AAACTT TTGC AAGTTTTGGGCTAAAAATAACCGCTTG TTTTTTAGAATTGAT TERM 1038 636725 - 636715 - g 78 -2.4 -5.55695 | CAACAAGATAAAAAA GCCG GCA CGGA AGTCAAAGCGGATCG cirA 635398 - 638538 + | ABC transporter ATP-binding protein rpsB 638803 - 639519 + | 30S ribosomal protein S2 TERM 1039 639555 - 639579 + F 100 -10.8 -4.86822 | gap 1 TTAAATCACTTTGGA GCAGGGGCGAT TTTT ATC-CCCCTGC TTTTCTTATCTAATT tsf 639615 - 640466 + | elongation factor Ts TERM 1040 640459 - 640447 - T 71 -6.3 -4.11484 | CGGAAGTTGCTAAAA TTACC GGC GGTAA CGCTTAATTCTCAAT TERM 1041 640509 - 640479 - T 87 -11.3 -3.18199 | opp_overlap 640486, overlap 640486 TAATTCTCAATTTAA TAAAAAAGCAGGC GATTA GCCTGCTTTTTTT CTGTCTGTTGCTATG TERM 1042 640486 - 640502 + T 100 -9.4 -5.77988 | opp_overlap 640479 640486 CAATTTAATAAAAAA GCAGGC GATTA GCCTGC TTTTTTTCTGTCTGT TERM 1043 640502 - 640486 - T 100 -9.4 -5.5074 | opp_overlap 640486, overlap 640479 CAATTTAATAAAAAA GCAGGC GATTA GCCTGC TTTTTTTCTGTCTGT TERM 1044 640618 - 640628 + T 81 -8.2 -4.09511 | opp_overlap 640613, overlap 640623 ATCGGAATCACAATC GCCG GAT CGGC TTTTGCCGGAATCTT APL_0568 642149 - 640596 - | hypothetical protein TERM 1045 640710 - 640699 - G 73 -5.8 -4.42806 | opp_overlap 640699, overlap 640695 TGATTGCTAAACAAA TCCG CTTG CGGA TTTAATTTCTCATTA TERM 1046 641597 - 641616 + g 77 -8.6 -3.94 | gap 1 TTGAGGTTCCCCACT CGG-ACGGA ATT TCCGTACCG TTATTTAAGGCTTCC pyrH 642261 - 642974 + | uridylate kinase TERM 1047 643038 - 642995 - f 83 -11.2 -2.70022 | opp_overlap 642979 642995, overlap 642994 CGTATGCGATACAAG CGGTCTGTATTCTTTACTTA TTTG CAAATAAAGAAAGCAGACCG TTTTTTGTTTGCTCG TERM 1048 642995 - 643038 + F 100 -10.5 -5.68438 | opp_overlap 642995 642994, overlap 642979 CGTATGCGATACAAG CGGTCTGTATTCTTTACTT ATTTGC AAATAAAGAAAGCAGACCG TTTTTTGTTTGCTCG frr 643158 - 643715 + | ribosome recycling factor TERM 1049 643737 - 643754 + T 100 -11.3 -4.85782 | opp_overlap 643737 CTGAATGAAGAAAAA GGCACGT GTTT ACGTGCC TTTATTTTTGCAAAA TERM 1050 643754 - 643737 - T 100 -11.3 -5.1963 | opp_overlap 643737 CTGAATGAAGAAAAA GGCACGT GTTT ACGTGCC TTTATTTTTGCAAAA gntR 645193 - 643793 - | HTH-type transcriptional regulator pdxS 645280 - 646167 + | pyridoxine biosynthesis protein pdxT 646167 - 646742 + | glutamine amidotransferase subunit PdxT TERM 1051 646784 - 646756 - T 86 -10.4 -3.60098 | opp_overlap 646751 646761 AGTTTTTATCGTAAA TCTAAGGACATC ATTTA GGTGTCCTTAGA TCGAATTGCATTTTG APL_0574 647385 - 646816 - | tRNA-specific adenosine deaminase TERM 1052 647405 - 647388 - R 93 -9.1 -4.4261 | opp_overlap 647388 GTTCTAATAGCAAAA TGCCCCA AAAT CGGGGCA TTTATTAACGGGATC TERM 1053 647388 - 647405 + r 81 -8.4 -4.1552 | opp_overlap 647388 GTTCTAATAGCAAAA TGCCCC AAAATC GGGGCA TTTATTAACGGGATC deaD 649282 - 647423 - | cold-shock DEAD box protein A-like protein TERM 1054 648592 - 648570 - G 71 -7 -4.16842 | TCGACTTCTAAGAAA CGCAATAACG CAT CGTTTTTACG GAAGCCGTTTACTAA TERM 1055 649455 - 649493 + r 100 -14 -3.41961 | opp_overlap 649455 GTCCCAAGAGTATAA GCGGTCCGTTTTTACAAG AAA TTTGTAAAACCAGACCGC TTCATTCGTCCTAAT TERM 1056 649493 - 649455 - R 100 -15.5 -3.52073 | opp_overlap 649455 GTCCCAAGAGTATAA GCGGTCCGTTTTTACAA GAAAT TTGTAAAACCAGACCGC TTCATTCGTCCTAAT nlpI 650445 - 649504 - | lipoprotein NlpI TERM 1057 649628 - 649652 + g 77 -5 -5.04868 | gap 1, opp_overlap 649628 TTTGCAAGAGAGAGA CGGA-AAAGCG TAAT CGCTTCATCCG TTTTATTTAATTTGA TERM 1058 650464 - 650502 + r 100 -17.8 -4.70659 | opp_overlap 650467, overlap 650467 GTAAATCGCCTATGA GAAGATATCTACCTTCAA GAA TTGAAGGTAGATATCTTA TTTTTAAATCTCAGC TERM 1059 650467 - 650499 + r 100 -19.5 -4.46215 | opp_overlap 650467, overlap 650464 AATCGCCTATGAGAA GATATCTACCTTCAA GAA TTGAAGGTAGATATC TTATTTTTAAATCTC TERM 1060 650499 - 650467 - R 100 -19.5 -3.40899 | opp_overlap 650467 650464 AATCGCCTATGAGAA GATATCTACCTTCAA GAA TTGAAGGTAGATATC TTATTTTTAAATCTC pnp 652653 - 650506 - | polynucleotide phosphorylase/polyadenylase TERM 1061 653174 - 653155 - g 84 -2.8 -5.63645 | gap 1, opp_overlap 653159 653166, overlap 653156 GCAAAATATAAAAAA TCCGC-ACG TAC CGTCGGGGA CGTGTTAGGTAAATT TERM 1062 653234 - 653244 + G 71 -4.6 -4.65078 | opp_overlap 653221 653226, overlap 653226 AAGCAATGGTGCTCA TGGC GCA GCCG TTTTCTTACCGCTAT TERM 1063 653759 - 653713 - g 71 -4.5 -4.61482 | gap 2 GTGTGGAAAAAAGAA GACGGAGAAATTGTGATTTCGGC ATT GCCGCA-TCA-AGCTTCACCGTC AAAAGTGATTGAGCA parC 652954 - 655200 + | DNA topoisomerase IV subunit A TERM 1064 655217 - 655261 + F 100 -18.9 -5.73563 | opp_overlap 655220, overlap 655220 TATTTTCTCATCAGA CAAGCGGTCAAATTTCGTAAA AAC TTTGCGGAATTTGACCGCTTC TTTTTTTGATTTCGT TERM 1065 655258 - 655220 - f 100 -16.2 -3.54475 | opp_overlap 655220 655217 TTTCTCATCAGACAA GCGGTCAAATTTCGTAAA AAC TTTGCGGAATTTGACCGC TTCTTTTTTTGATTT TERM 1066 655220 - 655258 + F 100 -20.6 -4.90519 | opp_overlap 655220, overlap 655217 TTTCTCATCAGACAA GCGGTCAAATTTCGTAAA AAC TTTGCGGAATTTGACCGC TTCTTTTTTTGATTT TERM 1067 655493 - 655505 + G 71 -3.4 -5.00412 | overlap 655487 GAGCTTTTAGAAAGT GATC TTATT GATC TTTTTCGTTATGTTT mukF 655340 - 656671 + | condesin subunit F mukE 656751 - 657464 + | condesin subunit E TERM 1068 658855 - 658841 - g 71 -4.2 -4.84359 | opp_overlap 658852 GCAGCCTTAGAAAAA GCGAAG CAA CTTTGC GGCTTGCCGCACTTA TERM 1069 659861 - 659871 + G 75 -8.2 -3.84808 | GTCAAAGTATCTGAT CGCC AAT GGCG TTATTCTAAGTTCCC mukB 657485 - 661975 + | cell division protein MukB TERM 1070 661987 - 662033 + F 100 -9.5 -5.00884 | opp_overlap 661988 661991 662002, overlap 661991 ATAAAGCGTGAACTT ACAAGCGGTCAGAAATTGCAA AAAAG TTGCAAAATCTGACCGCTTAA TTTTTTAGGAAGAAT TERM 1071 662032 - 661988 - f 100 -15.2 -2.54387 | opp_overlap 661987 661991, overlap 661991 662002 TAAAGCGTGAACTTA CAAGCGGTCAGAAATTGCAA AAAAG TTGCAAAATCTGACCGCTTA ATTTTTTAGGAAGAA TERM 1072 662029 - 661991 - f 100 -14.7 -3.42056 | opp_overlap 661987 661991, overlap 661988 662002 AGCGTGAACTTACAA GCGGTCAGAAATTGCAA AAAAG TTGCAAAATCTGACCGC TTAATTTTTTAGGAA TERM 1073 661991 - 662029 + F 100 -14.7 -3.93166 | opp_overlap 661991 661988 662002, overlap 661987 AGCGTGAACTTACAA GCGGTCAGAAATTGCAA AAAAG TTGCAAAATCTGACCGC TTAATTTTTTAGGAA sotB 662052 - 663227 + | sugar efflux transporter TERM 1074 663269 - 663244 - T 100 -13.5 -4.79352 | opp_overlap 663249, overlap 663249 TTAGGCACAATAAAA GAAAATGGGAT TGTT ATCCCATTTTC AGTTACCGCTTATTT TERM 1075 663264 - 663249 - T 89 -7.6 -5.31091 | opp_overlap 663249, overlap 663244 CACAATAAAAGAAAA TGGGAT TGTT ATCCCA TTTTCAGTTACCGCT TERM 1076 663249 - 663264 + T 81 -7.6 -4.27584 | opp_overlap 663249 663244 CACAATAAAAGAAAA TGGGAT TGTT ATCCCA TTTTCAGTTACCGCT APL_0583 665018 - 663279 - | hypothetical protein APL_0584 665242 - 665021 - | hypothetical protein TERM 1077 665280 - 665264 - H 82 -3.1 -5.63504 | overlap 665266 AATTTCATAAAAAAA TATTAAT AAT ATTAACA TAAAATTTAATGGAG TERM 1078 665826 - 665849 + G 79 -6.8 -4.63218 | opp_overlap 665826 665827 665829, overlap 665827 ATGCCGAATAATGAA TGATTCCGAA TTTA TTTGGAATCG TTTTGTTGAAGAAGG APL_0585 665452 - 666030 + | hypothetical protein TERM 1079 666196 - 666186 - g 75 -2.4 -5.27477 | ATTGCAAGTAAAAAA GCGG AAG CGGC GGCAAATATGCCGGA TERM 1080 667017 - 667002 - g 71 -9 -3.30124 | CTTTATGTCTTACAA CCGCTT TCCG AAGCGG ATAAACAATTAGCGA APL_0586 666063 - 667268 + | putative RND efflux membrane fusion protein TERM 1081 667661 - 667697 + G 79 -10.9 -2.99204 | overlap 667663 667667 TATTGACGATCCGTC CATTAGCGTTTCGTCCG GTT CGAACGATGCGTTAATG TATATCCGTTTCGTT TERM 1082 668681 - 668693 + G 70 -5.5 -4.42464 | GTTTGCACTAACGCT TGCCG GTG CGGTA TTTATTTCAGGGATT TERM 1083 669238 - 669267 + G 70 -9.3 -2.77899 | opp_overlap 669232, overlap 669238 669239 669242 TCCCGGAAATTTCAA CCGGTGAAAACGG TTTA CCGTTCTCATTGG TAATTACTACGGCGG acrB 667281 - 670400 + | acriflavine resistance protein TERM 1084 670420 - 670440 + F 93 -8.2 -5.53079 | opp_overlap 670420 TTAAATGGTTGAAAA GCTCCGTC AATAC GTCGGAGC TTTTTTATATCTTTT TERM 1085 670440 - 670420 - f 85 -8.9 -4.12942 | opp_overlap 670420 TTAAATGGTTGAAAA GCTCCGTCA ATA CGTCGGAGC TTTTTTATATCTTTT glmU 670619 - 671992 + | bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase TERM 1086 672060 - 672009 - T 100 -14.6 -5.28983 | opp_overlap 672012 672013, overlap 672013 672016 CTCAAAATATAAAAA TTAACAAGCGGTCGTTTTCGCAGA TTTT TTTGCAAAAACGACCGCTTGCTTT TTTGATATTTATATG TERM 1087 672012 - 672057 + T 100 -18.5 -5.34055 | opp_overlap 672009 672013 672016, overlap 672013 AAAATATAAAAATTA ACAAGCGGTCGTTTTCGCAGA TTTT TTTGCAAAAACGACCGCTTGC TTTTTTGATATTTAT TERM 1088 672056 - 672013 - T 100 -22 -3.95047 | opp_overlap 672012 672013, overlap 672009 672016 AAATATAAAAATTAA CAAGCGGTCGTTTTCGCAGA TTTT TTTGCAAAAACGACCGCTTG CTTTTTTGATATTTA TERM 1089 672013 - 672056 + T 100 -22 -3.77993 | opp_overlap 672013 672009 672016, overlap 672012 AAATATAAAAATTAA CAAGCGGTCGTTTTCGCAGA TTTT TTTGCAAAAACGACCGCTTG CTTTTTTGATATTTA TERM 1090 672053 - 672016 - T 100 -17.9 -4.0498 | opp_overlap 672013 672012, overlap 672013 672009 TATAAAAATTAACAA GCGGTCGTTTTCGCAGA TTTT TTTGCAAAAACGACCGC TTGCTTTTTTGATAT APL_0589 672408 - 672091 - | hypothetical protein APL_0590 673032 - 672412 - | hypothetical protein TERM 1091 674618 - 674643 + G 74 -10.5 -2.6914 | opp_overlap 674617 674620, overlap 674617 674620 GTTGCAAGACGCAAT CACCGATTTCA ATAA TGAATTCGGTG CTTATGTAAGCGGTC pgm 673326 - 674984 + | phosphoglucomutase/phosphomannomutase TERM 1092 675017 - 675000 - T 100 -11.3 -5.02323 | opp_overlap 675000 TTAGCATAAAGAAAA GCCCTGT GTTT ACAGGGC TTTGAGCTATTTTTG TERM 1093 675000 - 675017 + T 90 -11.3 -3.73294 | opp_overlap 675000 TTAGCATAAAGAAAA GCCCTGT GTTT ACAGGGC TTTGAGCTATTTTTG guaA 676637 - 675066 - | bifunctional GMP synthase/glutamine amidotransferase protein TERM 1094 677050 - 677004 - R 100 -16.8 -3.82604 | opp_overlap 677008, overlap 677005 TTATTTAAGGAATAA TCAAGCGGTCAAATTTTGCAAA AAA TTGGCAAAATCCGACCGCTTGT CAAGATTAACCCATA TERM 1095 677049 - 677005 - R 100 -20.3 -2.89081 | opp_overlap 677008, overlap 677004 TATTTAAGGAATAAT CAAGCGGTCAAATTTTGCAAA AAA TTGGCAAAATCCGACCGCTTG TCAAGATTAACCCAT TERM 1096 677008 - 677046 + r 89 -11.8 -3.33261 | opp_overlap 677005 677004 TTAAGGAATAATCAA GCGGTCAAATTTTGCAAA AAA TTGGCAAAATCCGACCGC TTGTCAAGATTAACC guaB 678519 - 677056 - | inositol-5-monophosphate dehydrogenase TERM 1097 678111 - 678101 - G 74 -6.8 -4.39002 | AAATCTCTTACAAAA CGTG TAT CACG TCCGGTAATAATACC TERM 1098 678242 - 678222 - G 70 -7.5 -3.89501 | opp_overlap 678233, overlap 678223 TAAGATCCGGAGAAA CCGTTACCG GCT CGGAAACGA TACCGCTTTCGAATT TERM 1099 678618 - 678629 + H 76 -4.4 -5.11112 | TAAATTTGAATTTTG GCAA ACGA TTGC TTTTTGTTGAAATTT TERM 1100 679044 - 679032 - g 71 -9.1 -3.32498 | TATTTTAGATATGAA CCCGA TTG TCGGG GTGGACTTTCTACAA TERM 1101 679253 - 679286 + G 80 -9 -3.91984 | CTAAAGGCAGTTTTG TCGTCAAAGTGTTC CAAGGT GAAGGCTTTGACGA TTATTTAAGAGATAT rrmJ 678772 - 679398 + | 23S rRNA methyltransferase J TERM 1102 679404 - 679442 + F 73 -8.2 -3.65046 | opp_overlap 679404 TAAAGGTTGAGATAA GCGGTCAAGTTTTGCAGA AAT TTTGTAAAATCCGACCGC TTGTTAAAATGAAGA TERM 1103 680246 - 680236 - g 75 -3.2 -5.14645 | ACAAGCGAAGAAAAA CGCA CCT TGCA TTATCTTTATCGATG TERM 1104 680448 - 680469 + G 80 -10.2 -3.56643 | opp_overlap 680463 CTCGTCCGGGACGTT TCGACCGT CAAGTA ACGGTCGA TTTACCGAATGTAAA ftsH 679502 - 681424 + | cell division protease FtsH-like protein TERM 1105 681470 - 681447 - f 100 -11 -4.42976 | opp_overlap 681447 TCATAAATGAATAAA GCCGAGAAGC GAAA GTTTCTCGGC TTTTTTGTGTAAGAA TERM 1106 681447 - 681470 + F 100 -13.2 -5.36441 | opp_overlap 681447 TCATAAATGAATAAA GCCGAGAAGC GAAA GTTTCTCGGC TTTTTTGTGTAAGAA tyrP-A 681662 - 682876 + | tyrosine-specific transport protein 1 TERM 1107 683527 - 683539 + G 71 -3.3 -5.00851 | AATCTGTTTGTTGTT TCAGC CGT GCCGA TTTTCTTTACTTCGT tyrP-B 682972 - 684189 + | tyrosine-specific transport protein 2 TERM 1108 684246 - 684198 - f 73 -8.9 -3.19634 | opp_overlap 684203 684243, overlap 684197 684199 AGGTTAAATATAAAT GCCAAGCGGTCAGAAATTGCAGA AAT TTTGCAAATTCTGACCGCTTTTT TATATGATAAAGATG TERM 1109 684245 - 684199 - f 86 -12.4 -2.51057 | opp_overlap 684203 684243, overlap 684198 684197 GGTTAAATATAAATG CCAAGCGGTCAGAAATTGCAGA AAT TTTGCAAATTCTGACCGCTTTT TTATATGATAAAGAT TERM 1110 684203 - 684241 + F 100 -19.8 -5.39721 | opp_overlap 684199 684198 684197 AAATATAAATGCCAA GCGGTCAGAAATTGCAGA AAT TTTGCAAATTCTGACCGC TTTTTTATATGATAA TERM 1111 684993 - 685017 + G 72 -6.3 -4.29176 | overlap 684988 AGGAGTTGAATAGCG CGCAAGCGGTA TTA TTCCGTATGCG TTTTGCCTTACATCT glnD 684296 - 686848 + | PII uridylyl-transferase TERM 1112 686850 - 686872 + T 91 -12 -3.76641 | overlap 686851 686853 AATTGTCGGAGTAGT GTAGAGGGCG TAA CGCCCTCTAA TTTAAGTATTAAGAT TERM 1113 686851 - 686871 + T 100 -15.5 -2.85503 | overlap 686850 686853 ATTGTCGGAGTAGTG TAGAGGGCG TAA CGCCCTCTA ATTTAAGTATTAAGA TERM 1114 686853 - 686869 + T 90 -13.7 -2.974 | overlap 686851 686850 TGTCGGAGTAGTGTA GAGGGCG TAA CGCCCTC TAATTTAAGTATTAA APL_0599 687279 - 686881 - | hypothetical protein rplM 687584 - 688012 + | 50S ribosomal protein L13 TERM 1115 688127 - 688098 - g 72 -7.9 -3.76224 | overlap 688099 CGTGTATTTATCAAA CCGGGCAATGGTA ACAT TACCATTGACCAA CGTTCTTTAGACGTT TERM 1116 688126 - 688099 - g 70 -9.2 -2.8552 | overlap 688098 GTGTATTTATCAAAC CGGGCAATGGTA ACAT TACCATTGACCA ACGTTCTTTAGACGT rpsI 688029 - 688424 + | 30S ribosomal protein S9 TERM 1117 688457 - 688489 + F 100 -12.2 -4.95155 | gap 1, opp_overlap 688465, overlap 688465 ATACGAAAGTATTAT CAGCAGAAGGCAGGA TTAT TCCTGCCTTTT-CTG TTTTTATCGTCTGAC TERM 1118 688482 - 688465 - f 89 -11.3 -3.45023 | opp_overlap 688465 688457 GTATTATCAGCAGAA GGCAGGA TTAT TCCTGCC TTTTCTGTTTTTATC TERM 1119 688465 - 688482 + F 100 -11.3 -5.02287 | opp_overlap 688465, overlap 688457 GTATTATCAGCAGAA GGCAGGA TTAT TCCTGCC TTTTCTGTTTTTATC APL_0602 688546 - 689328 + | hypothetical protein TERM 1120 689319 - 689337 + F 71 -3 -5.06816 | CTTTAAACGTGAGGA GCAAGCGT AAT GCGTTGGC TTTTTCTTGCAGGAT APL_0603 689328 - 689873 + | hypothetical protein TERM 1121 690721 - 690736 + G 74 -7.6 -3.99374 | AAAATTCTGGCGATT TTTCCG CGTT CGGAAA TTATTATTCATCAAG fieF 689899 - 690822 + | cation-efflux pump FieF TERM 1122 691395 - 691407 + G 82 -3.3 -5.42164 | AGCTTGAAGCGATCA GTGGG GTG CCGAC TTTTTATTATTTATA APL_0605 690803 - 691573 + | hypothetical protein TERM 1123 691619 - 691648 + F 89 -6.5 -5.60689 | gap 1, opp_overlap 691624, overlap 691624 AAGTTGTATTGAAAC GATAAGGCGAGAGT TAT ATGCTCGCCTT-TC TTTTTTATTGTGTGG TERM 1124 691624 - 691644 + F 89 -7.5 -5.22768 | opp_overlap 691624, overlap 691619 GTATTGAAACGATAA GGCGAGAGT TAT ATGCTCGCC TTTCTTTTTTATTGT APL_0606 691672 - 692997 + | symporter protein TERM 1125 693053 - 693080 + T 87 -11.4 -3.29649 | opp_overlap 693055 693060, overlap 693060 GCTTGCAGCAGAAAA TAGAAAAGGGGC ATTA GCCCCTTTTTTG TTGCTATAGTCGAAT TERM 1126 693078 - 693055 - T 83 -9.6 -3.84183 | opp_overlap 693053 693060, overlap 693060 TTGCAGCAGAAAATA GAAAAGGGGC ATTA GCCCCTTTTT TGTTGCTATAGTCGA TERM 1127 693073 - 693060 - T 100 -9.5 -4.94487 | opp_overlap 693053 693060, overlap 693055 GCAGAAAATAGAAAA GGGGC ATTA GCCCC TTTTTTGTTGCTATA TERM 1128 693060 - 693073 + T 100 -9.5 -5.5353 | opp_overlap 693060 693055, overlap 693053 GCAGAAAATAGAAAA GGGGC ATTA GCCCC TTTTTTGTTGCTATA nfnB 693761 - 693099 - | putative NAD(P)H nitroreductase pheS 694038 - 695024 + | phenylalanyl-tRNA synthetase subunit alpha TERM 1129 695227 - 695245 + G 82 -10.2 -3.60006 | AGAAGTCGATGATGT TGAGCCGG TTG CCGGCGCA TTTAGCGGTGTGGTT pheT 695123 - 697510 + | phenylalanyl-tRNA synthetase subunit beta ihfA 697528 - 697824 + | integration host factor, alpha chain TERM 1130 697866 - 697830 - f 100 -13.2 -4.59089 | gap 1, opp_overlap 697830 GAAGGCATAAATAAA GACATTCCATA-GCCTC TATT GGGGCTTATGGAATGTC TTTTATAGGTAACCT TERM 1131 697830 - 697866 + F 100 -15.4 -4.42653 | gap 1, opp_overlap 697830 GAAGGCATAAATAAA GACATTCCAT-AGCCTC TATT GGGGCTTATGGAATGTC TTTTATAGGTAACCT APL_0611 697885 - 698409 + | putative lipoprotein TERM 1132 698418 - 698433 + T 74 -6.2 -4.56597 | opp_overlap 698418 TTTATAATGATTTAA TGTGAA GTAG TTCACA TTTTTAAGAAAAAGA TERM 1133 698562 - 698579 + T 93 -8.4 -5.63504 | TTTGCTTTCCGAGTA GCCCCT AAGTTG AGGGGC TTTTTTTATGCCGTT TERM 1134 698691 - 698723 + T 100 -17.9 -4.5852 | opp_overlap 698691 GACTGTTTAATTTAA GGACTGAGTTCTGTA TTG TACAGGGCTCAGTCC TTTTAATTTCACTTG TERM 1135 698723 - 698691 - T 93 -13.5 -3.17392 | opp_overlap 698691 GACTGTTTAATTTAA GGACTGAGTTCTGTA TTG TACAGGGCTCAGTCC TTTTAATTTCACTTG APL_0612 699464 - 698682 - | putative transposase TERM 1136 699337 - 699319 - G 71 -2.4 -5.09225 | ATCGCACCCAAAAAA TCACGTAA CTT TAACGTAA TACGACGATAGCCGT APL_0613 700015 - 699506 - | transposase bioD 700807 - 700088 - | dithiobiotin synthetase mlc 702051 - 700861 - | putative transcriptional repressor of carbohydrate metabolism TERM 1137 702020 - 702032 + g 71 -4.1 -4.77165 | AGGCGATAAATTGTG CCTAA GTG TTGGG TTTTATTATCAGAAA TERM 1138 702162 - 702191 + H 81 -7.4 -4.45168 | CACAACTGTTTTATG TTAATTTTGTGA ATTAGC TCACAGAATTAA TTTATCTTTTAAAAA TERM 1139 702310 - 702282 - g 75 -3.1 -5.1971 | ACGAAAAATTAAAAA CGGTTTGCGAGAA CGC TTGTCGGAAATCG GCAGTGGCATTGGAT TERM 1140 702953 - 702932 - g 71 -4.5 -4.70626 | GAAGAAGCGGAAAAA CGAGATTTA GCAT TAAATTTCG TCGTGAAAGAAAATT rnd 702230 - 703345 + | ribonuclease D lrp 703430 - 703912 + | leucine-responsive transcriptional regulator TERM 1141 704285 - 704297 + G 71 -9.1 -3.25177 | overlap 704283 704281 TTATAGCCGGTTTAG CCGGA CTG TCCGG TGTGATTTTTTCAAA TERM 1142 705037 - 705020 - g 70 -5.6 -4.40601 | overlap 704993 AATCGATAGAAGAAA CCGTTT TCAAGC AAACGG AAGAAACCGAAACGG TERM 1143 705520 - 705500 - g 73 -8.3 -3.73224 | overlap 705505 TTACTCGTTATGAAA TTAAACCGG CTG CCGGTGTAA AAGCGGCGAAAGTAG TERM 1144 705515 - 705505 - g 79 -8.2 -4.10552 | overlap 705500 CGTTATGAAATTAAA CCGG CTG CCGG TGTAAAAGCGGCGAA ftsK 703924 - 706794 + | DNA translocase FtsK TERM 1145 706827 - 706880 + F 100 -9.9 -4.63932 | gap 1, opp_overlap 706825 706829, overlap 706829 TTATTTTTATAAAGC AAGCGGTTGAATTTTTCCCTAAATTT GCA AACTTTAAGG-AAAATTCGACCGCTC TTTTATTGCCGACTA TERM 1146 706829 - 706878 + F 100 -12.5 -3.93367 | gap 1, opp_overlap 706825 706829, overlap 706827 ATTTTTATAAAGCAA GCGGTTGAATTTTTCCCTAAATTT GCA AACTTTAAGG-AAAATTCGACCGC TCTTTTATTGCCGAC TERM 1147 706878 - 706829 - f 95 -12.5 -3.60798 | gap 1, opp_overlap 706829 706827, overlap 706825 ATTTTTATAAAGCAA GCGGTTGAATTTTTCCCTAAATTT GCA AACTTTAAGGAAAA-TTCGACCGC TCTTTTATTGCCGAC TERM 1148 707346 - 707368 + G 71 -4 -4.77165 | ATACGGCTTGCGGAA CGGGTCAATC TGC GATGGGGCCG TTTTATTGTCCGGCG TERM 1149 707561 - 707544 - g 86 -9.1 -4.37157 | overlap 707531 AACGAGCACAACAAA CCGCTCG CAAT CAAGCGG CGGCTAATAAAATTT APL_0619 706979 - 707842 + | hypothetical protein TERM 1150 707853 - 707884 + F 77 -8.9 -3.64609 | opp_overlap 707853 707872 GTTAATTCATATAAA TGGTTTTGTACTA GTAAAA TAGTTCAAAACCA TTTGACATACTTCTC TERM 1151 707884 - 707853 - f 85 -8.9 -4.09108 | opp_overlap 707853, overlap 707872 GTTAATTCATATAAA TGGTTTTGTACTA GTAAAA TAGTTCAAAACCA TTTGACATACTTCTC aroG 707965 - 709038 + | phospho-2-dehydro-3-deoxyheptonate aldolase APL_0621 709142 - 709834 + | putative M22-like peptidase TERM 1152 709875 - 709909 + T 72 -5.9 -4.40804 | opp_overlap 709875 709882, overlap 709882 AAAATACAAAAAATA TGAGAAAGGTACG CATAAAAAA CGTACCTTTTTTA TTTTGTAAGATCCTA TERM 1153 709882 - 709902 + T 90 -4 -5.86976 | opp_overlap 709875 709882, overlap 709875 AAAAAATATGAGAAA GGTACG CATAAAAAA CGTACC TTTTTTATTTTGTAA TERM 1154 710261 - 710224 - T 100 -9.3 -5.48623 | opp_overlap 710224 710231 AAAGATAAAGAAAAA GCGGTTGTTTTCGTAAA AATT TTTGTAAAAACAACCGC TTATAAATTAGATTA TERM 1155 710224 - 710261 + T 89 -11.5 -3.43564 | opp_overlap 710224, overlap 710231 AAAGATAAAGAAAAA GCGGTTGTTTTCGTAAA AATT TTTGTAAAAACAACCGC TTATAAATTAGATTA tdk 710855 - 710274 - | thymidine kinase TERM 1156 710895 - 710876 - R 100 -10.8 -5.76237 | opp_overlap 710876 TATACAAATAAAAAA CGGCTAAT GCAA ATTAGCCG TTCTATTGAAAAGGA TERM 1157 710876 - 710895 + r 89 -10.8 -3.65812 | opp_overlap 710876 TATACAAATAAAAAA CGGCTAAT GCAA ATTAGCCG TTCTATTGAAAAGGA APL_0623 711133 - 710915 - | hypothetical protein TERM 1158 711428 - 711407 - g 85 -7.2 -4.85599 | overlap 711409 TCGAGGTGATAAAAA TGCCGCCG ACGATG CGGCGGTA AAAGCGATGCGCTTA TERM 1159 711426 - 711409 - g 71 -9.8 -2.70044 | overlap 711407 GAGGTGATAAAAATG CCGCCG ACGATG CGGCGG TAAAAGCGATGCGCT glpX 711318 - 712316 + | fructose 1,6-bisphosphatase II TERM 1160 712324 - 712359 + T 76 -6.3 -4.5366 | opp_overlap 712331, overlap 712326 712331 AAGATTAAATCCCAG TAAAAAAGTCGTATC TTTTCC GATACGACTTTTGCA TTTTAGGTTTTTTCA TERM 1161 712352 - 712331 - T 95 -8.8 -5.16237 | opp_overlap 712326 712324 712331 AATCCCAGTAAAAAA GTCGTATC TTTTCC GATACGAC TTTTGCATTTTAGGT TERM 1162 712331 - 712352 + T 89 -8.8 -4.43272 | opp_overlap 712331, overlap 712326 712324 AATCCCAGTAAAAAA GTCGTATC TTTTCC GATACGAC TTTTGCATTTTAGGT APL_0625 713152 - 712379 - | hypothetical protein TERM 1163 712919 - 712938 + g 73 -7.2 -4.08767 | gap 1, opp_overlap 712929, overlap 712905 TTTACCTTTCATTCC GCGAAT-GC AAG GCGATTCGC TTTTCCAAAAATAAC TERM 1164 713232 - 713177 - R 79 -5.6 -5.06414 | opp_overlap 713192, overlap 713194 TTTTTTTAAGAAAAA CAAGCGGTTAAAATTTATGCAAAATT TGCA AATTTAACGCTAAATTCAACCGCTTG TCGTGAATGAATTAC macB 715166 - 713244 - | putative macrolide-specific ABC-type efflux carrier TERM 1165 714928 - 714904 - G 86 -5.8 -5.26119 | gap 1 CGTTGAAAAATAAAA CCGAACTTACG CTGA CGTAAAT-CGG AAAGTTCGTCGGACG APL_0627 716195 - 715311 - | two-component sensor protein APL_0628 716711 - 716424 - | hypothetical protein TERM 1166 716741 - 716759 + r 86 -10.3 -3.53012 | opp_overlap 716741 AATTTAAAAAGAAAA TCCCTCG ATAAG CGAGGGA TTTCAAAGAAAAGGA TERM 1167 716759 - 716741 - R 100 -10.3 -5.29885 | opp_overlap 716741 AATTTAAAAAGAAAA TCCCTCG ATAAG CGAGGGA TTTCAAAGAAAAGGA cpxR 717504 - 716776 - | transcriptional regulatory protein CpxR mazG 718228 - 717629 - | pyrophosphatase accD 718567 - 719460 + | acetyl-CoA carboxylase subunit beta TERM 1168 719482 - 719498 + F 100 -12.3 -4.85782 | opp_overlap 719477 719482 TTAAGCATAACTTAA GCCACGT AAT ACGTGGC TTTCTTTTTGAGAAC TERM 1169 719498 - 719482 - f 91 -12.3 -3.2653 | opp_overlap 719482, overlap 719477 TTAAGCATAACTTAA GCCACGT AAT ACGTGGC TTTCTTTTTGAGAAC folC 719517 - 720821 + | folylpolyglutamate synthase/dihydrofolate synthase TERM 1170 722589 - 722564 - g 71 -3.2 -4.95876 | opp_overlap 722564 722565, overlap 722565 AATTAGAAGCAAAAA TCCGAGCG AATTTGGCAA CGCTCGGG TTTTAAACGTAGGGA hsdM3 721030 - 722595 + | putative type I modification enzyme TERM 1171 722605 - 722617 + F 79 -9.1 -3.37283 | opp_overlap 722597, overlap 722603 TTTTAAACGTAGGGA CGCAC TGC GTGCG TATTTACGGCATTTA TERM 1172 722693 - 722673 - f 90 -11.1 -3.74713 | overlap 722674 TAAAAATCCCAACAA CGGACGCAC GCA GTGCGTCCC TACCAATCACGTTTT TERM 1173 722692 - 722674 - f 95 -14.6 -2.83743 | overlap 722673 AAAAATCCCAACAAC GGACGCAC GCA GTGCGTCC CTACCAATCACGTTT TERM 1174 723249 - 723238 - g 70 -5.8 -4.33851 | opp_overlap 723238 AAACCCTAGAACAAA TCGC CCAA GCGA TTTTCAAAAGTTGGT hsdS3 722739 - 723980 + | putative type I restriction system specificity protein APL_0635 724156 - 724608 + | hypothetical protein TERM 1175 725825 - 725847 + G 72 -6.2 -4.40561 | CTTGCGCGTGGAACT TGCCAAGCGT GAA ACGGGTGGCA TTATTTTTACCACCA TERM 1176 726971 - 726961 - g 71 -4 -4.7497 | TTGACGTATTAAAAA TTCA CGA TGAA ATGGCGTTGTTTGAG hsdR3 724743 - 727883 + | putative type I site-specific restriction-modification system, restriction subunit TERM 1177 728057 - 728082 + F 100 -13.5 -5.23292 | CAACCAGTTTTAAGG CTCACAGTTTT GTTT AAAACTGTGAG TTTTGTTTTATATAG TERM 1178 728163 - 728184 + F 82 -3 -5.64274 | gap 2, opp_overlap 728163, overlap 728163 728163 ACAAACCGCTTAAAG CCCC--ACGG TTTT CCGTCTGGGG TTTTTTTGTGGCTGG TERM 1179 728221 - 728236 + F 86 -2.5 -5.77988 | ATAATCGTATCAAAA GAGCT GGTTAA GGCTC TTTTTTTATATCTGT APL_0637 728268 - 728729 + | hypothetical protein nusA 728746 - 730227 + | transcription elongation factor NusA TERM 1180 730660 - 730642 - g 84 -3.8 -5.5074 | overlap 730645 GAAGCGAAGAAAAAA GAAGAAGC TGA ACTTCGTC GTAAACAAGAAGAAT TERM 1181 730657 - 730645 - g 71 -4.1 -4.81306 | overlap 730642 GCGAAGAAAAAAGAA GAAGC TGA ACTTC GTCGTAAACAAGAAG infB 730249 - 732774 + | translation initiation factor IF-2 TERM 1182 732792 - 732847 + F 100 -16.7 -4.74504 | gap 2, opp_overlap 732795 TCGTTTCATTACTCA CAAGCGGTCAGATTTCTGCATAAATTT GCAA AAATTTA-GTGGAAA-CTGACCGCTTG TTTTTGGCTTAACAT TERM 1183 732844 - 732795 - f 72 -8.2 -3.37796 | gap 2, opp_overlap 732792 TTTCATTACTCACAA GCGGTCAGATTTCTGCATAAATTT GCAA AAATTTA-GTGGAAA-CTGACCGC TTGTTTTTGGCTTAA TERM 1184 732904 - 732926 + F 79 -8.4 -3.92659 | overlap 732905 ATCCCAACAAAATTT TGAGGCGCTT TTG GAGTGCCTCG TTTGCATTTTGGAGA TERM 1185 732905 - 732925 + F 76 -9.7 -2.95113 | overlap 732904 TCCCAACAAAATTTT GAGGCGCTT TTG GAGTGCCTC GTTTGCATTTTGGAG rbfA 732946 - 733329 + | ribosome-binding factor A TERM 1186 733369 - 733351 - g 71 -3 -5.02476 | opp_overlap 733351 733352, overlap 733352 AGACCTCGTAAAAAA GGGCGTGA TGT TCACGGCG TATTTTTATTAGATA TERM 1187 733443 - 733429 - g 72 -7.8 -3.76413 | TTGCAAAAGGTTAAA CGCCTG TTT CAAGCG AATAAAGCGGGGCAT truB 733330 - 734247 + | tRNA pseudouridine synthase B TERM 1188 735348 - 735358 + G 71 -6.8 -4.08216 | CAGCATCGGTAAGTT TGCG GAT CGCA TTTTAGAAAGCGTGG mltB 734293 - 735381 + | membrane-bound lytic murein transglycosylase B APL_0643 735510 - 735695 + | hypothetical protein TERM 1189 735704 - 735723 + T 93 -7.8 -5.60993 | opp_overlap 735704 735699 735706 AGCATAATGAGAAAA GTCCTGTG ATAT CGCAGGGC TTTTTTTGTGGCAAA TERM 1190 735793 - 735776 - T 100 -11.3 -5.32882 | opp_overlap 735769 735776 TATCAGCATAAAAAA TGCCCTC ATTT GAGGGCA TTTCGCTATTTGTAA TERM 1191 735776 - 735793 + T 90 -11.3 -3.83324 | opp_overlap 735776, overlap 735769 TATCAGCATAAAAAA TGCCCTC ATTT GAGGGCA TTTCGCTATTTGTAA pta 737952 - 735814 - | phosphate acetyltransferase TERM 1192 737837 - 737862 + g 70 -2.7 -5.06414 | overlap 737835 ATAGGTTGCGCGATT GGTTTTAAA AAGCCGAC TTTAGAACC TTTTTGTTCCAAAGC TERM 1193 738000 - 737984 - R 100 -12.3 -4.49756 | opp_overlap 737978 TGTGAAATAGTAAAA GGGCAGA ATA TCTGCCC TTGGAAATTATAGTG ackA 739216 - 738008 - | acetate kinase TERM 1194 739841 - 739831 - g 91 -8.2 -4.62203 | opp_overlap 739830 GCTAAACAAGGAAAA GCCG ATC CGGC AATTGCTACTTTAAA TERM 1195 740065 - 740054 - g 71 -4.4 -4.86385 | ACGGTCAAAAACAAA CGAT TAAA ATCG GCTATATCGGCTTTG TERM 1196 740739 - 740769 + G 91 -11.8 -3.53012 | opp_overlap 740738 740756, overlap 740728 740738 740736 ACTGCCGGAACTTAC CGGTTTGCCGGTAT TAA GTGCCGGCGCACCG TTTAAAGCGGGCGGG cpdB 739513 - 741489 + | bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein TERM 1197 741743 - 741754 + T 74 -5.8 -4.60041 | overlap 741753 TTCTTCAACCCGCCA TCCG TTTT CGGA TTTTTGAAAATCGCT TERM 1198 742403 - 742381 - T 100 -12.8 -5.62288 | opp_overlap 742381 TTAAGAAAACAAAAA CCCCAATAGT CTT ACTACTGGGG TTTTTTAAAGCTTAT TERM 1199 742381 - 742403 + T 100 -10.6 -5.06103 | opp_overlap 742381 TTAAGAAAACAAAAA CCCCAATAGT CTT ACTACTGGGG TTTTTTAAAGCTTAT ompP2 743515 - 742439 - | Outer membrane protein P2 precursor (OMP P2) TERM 1200 743328 - 743339 + g 85 -2.2 -5.89659 | CCAGCATTACGTAAT TGTG AATG CGCA TTTTTCTTTTTTTCT APL_0650 743985 - 744506 + | hypothetical protein TERM 1201 744503 - 744527 + T 82 -8.6 -4.05027 | opp_overlap 744502 744504 744507, overlap 744504 744507 AAAACTATCTAAAAT ATAAGGACGC TAATT GCGTCCTTAG TTATTCTTGGTTATA TERM 1202 744504 - 744526 + T 85 -12.1 -3.01932 | opp_overlap 744502 744504 744507, overlap 744503 744507 AAACTATCTAAAATA TAAGGACGC TAATT GCGTCCTTA GTTATTCTTGGTTAT TERM 1203 744526 - 744504 - T 91 -12.1 -3.72347 | opp_overlap 744504 744503 744507, overlap 744502 744507 AAACTATCTAAAATA TAAGGACGC TAATT GCGTCCTTA GTTATTCTTGGTTAT TERM 1204 744523 - 744507 - T 85 -9.4 -3.97622 | opp_overlap 744507 744504 744503, overlap 744504 744502 CTATCTAAAATATAA GGACGC TAATT GCGTCC TTAGTTATTCTTGGT TERM 1205 744507 - 744523 + T 80 -9.4 -3.62857 | opp_overlap 744504 744502 744507, overlap 744504 744503 CTATCTAAAATATAA GGACGC TAATT GCGTCC TTAGTTATTCTTGGT galU 745425 - 744538 - | UTP--glucose-1-phosphate uridylyltransferase TERM 1206 744741 - 744752 + g 73 -5.8 -4.57755 | GGATCTCATCGCCTA CACC AACC GGTG TTTTCTCTAATAAAT TERM 1207 745454 - 745442 - R 79 -9.1 -3.34501 | opp_overlap 745442 745441 ACATAATCCTTATAA GGTGC ATA GCACC GTTTAAATCAAATAC TERM 1208 745442 - 745454 + r 73 -9.1 -2.79327 | opp_overlap 745442, overlap 745441 ACATAATCCTTATAA GGTGC ATA GCACC GTTTAAATCAAATAC TERM 1209 745491 - 745514 + r 71 -8.8 -3.00138 | opp_overlap 745489 745487 745491, overlap 745488 745493 GTATCTCATAATAGA GACCGCTCGT ATAA GCAAGCGGTC TAATTTCATCTAAAT TERM 1210 745514 - 745491 - R 83 -10.3 -3.18118 | opp_overlap 745491 745488 745493, overlap 745489 745487 GTATCTCATAATAGA GACCGCTCG TATAAG CAAGCGGTC TAATTTCATCTAAAT manB 746896 - 745538 - | phosphomannomutase csrA 747125 - 746931 - | carbon storage regulator CsrA alaS 749827 - 747203 - | alanyl-tRNA synthetase TERM 1211 748452 - 748464 + g 70 -7.7 -3.66921 | opp_overlap 748451 TCTAGATTATCATAG CCGAT AAA ATCGG TTTGACCTTCCACTT TERM 1212 750002 - 749966 - R 100 -12.6 -5.18357 | gap 1, opp_overlap 749965 749964 749969 TAATTTATTAAAAAA CAACCGCTTGAAAAGCT AAAG AACTTTT-AAGCGGTTG AGTTTAAGGTTATTT uspA 750478 - 750053 - | universal stress protein A-like protein TERM 1213 750253 - 750276 + g 71 -9.6 -2.94598 | opp_overlap 750242 750253, overlap 750252 750271 AAACCGGATAATTCA CTTTAGCCGA TAAT TCGGCTAACG CTTTAGTGGTTTCTT hlyX 750742 - 751509 + | fumarate/nitrate reduction transcriptional regulator TERM 1214 751528 - 751551 + T 100 -11.2 -5.7946 | opp_overlap 751528 TTATAAAAACAAAAA TACCACTATT TTCT AATAGTGGTA TTTTTTTGTTCGGAA TERM 1215 751551 - 751528 - T 100 -11.2 -5.69262 | opp_overlap 751528 TTATAAAAACAAAAA TACCACTATT TTCT AATAGTGGTA TTTTTTTGTTCGGAA sspB 752024 - 751608 - | ClpXP protease specificity-enhancing factor sspA 752668 - 752024 - | stringent starvation protein A-like protein purE 752887 - 753381 + | phosphoribosylaminoimidazole carboxylase catalytic subunit ansB 753391 - 754356 + | L-asparaginase purK 754466 - 755554 + | phosphoribosylaminoimidazole carboxylase ATPase subunit TERM 1216 755561 - 755610 + F 70 -4.1 -4.70583 | gap 3, opp_overlap 755582 CTCAAATAAGTACAG GCGGTCTATTTTCTTGTGAAATTT GCAAA AAATTTT-CAA-AAA-TAGACCGC TTTTCTATTGCTAAA aspC 755686 - 756882 + | aromatic amino acid aminotransferase TERM 1217 756899 - 756956 + T 80 -7 -4.61353 | opp_overlap 756899 CACTATTTTGTAAAA CCACGGACTACACTGAATACACGGAA AATTTA TTCTGTGAACACTATGTAGTTCGTGG TTATTTTTATGTATA TERM 1218 756956 - 756899 - T 75 -7 -4.10161 | opp_overlap 756899 CACTATTTTGTAAAA CCACGGACTACACTGAATACACGGAA AATTTA TTCTGTGAACACTATGTAGTTCGTGG TTATTTTTATGTATA pepP 758347 - 757061 - | Xaa-Pro aminopeptidase TERM 1219 757838 - 757860 + g 76 -9.2 -3.55071 | opp_overlap 757830, overlap 757825 AATCAACGCAATTTC TGCCGTTGAT TTA ATCAACCGCA TTTCCGACAATATCG TERM 1220 758668 - 758698 + r 77 -9.7 -3.05046 | opp_overlap 758669 758672, overlap 758667 TTAACCGCTTGTTAA ATGACTCTCTCCC CTTAC GGGAGAGAGACAG ATTTTAGCAAAGTAA TERM 1221 758697 - 758669 - R 95 -13.2 -3.53761 | opp_overlap 758668 758667, overlap 758672 TAACCGCTTGTTAAA TGACTCTCTCCC CTTAC GGGAGAGAGACA GATTTTAGCAAAGTA TERM 1222 758694 - 758672 - R 89 -13.5 -2.90496 | opp_overlap 758668 758667, overlap 758669 CCGCTTGTTAAATGA CTCTCTCCC CTTAC GGGAGAGAG ACAGATTTTAGCAAA TERM 1223 758729 - 758698 - R 71 -8.9 -3.05498 | opp_overlap 758667, overlap 758700 TACGGGAGAGAGACA GATTTTAGCAAAG TAACGG CTTTGCGAAAATC AGAGTGAGGAAGCTA APL_0664 759979 - 758756 - | hypothetical protein TERM 1224 760025 - 759987 - R 85 -8.5 -4.15854 | AAATTCATGGGAAAA TTCAGTTTAATTTAAGA TATTG TCGTAAATTAAACTAAA AAATATGATACAAGT TERM 1225 760087 - 760051 - R 93 -8.3 -5.72053 | opp_overlap 760051 CAAGTAAAGAAAAAA TTAGTTTAATTTAAGGT ATA ATCGTAAATTAAACTAA TTTTTGGGTGTTGAG TERM 1226 760051 - 760087 + r 100 -10.5 -4.74706 | opp_overlap 760051 CAAGTAAAGAAAAAA TTAGTTTAATTTAAGGT ATA ATCGTAAATTAAACTAA TTTTTGGGTGTTGAG APL_0665 760504 - 760115 - | hypothetical protein APL_0666 760765 - 760505 - | hypothetical protein uvrB 762920 - 760899 - | excinuclease ABC subunit B TERM 1227 761944 - 761960 + g 70 -5.7 -4.36914 | opp_overlap 761909, overlap 761947 TAATCGAATAATGTC GGAGGCG GTT CGCCCTC TTTTCTGCCCGACAG TERM 1228 762927 - 762952 + H 73 -6.9 -4.07568 | opp_overlap 762925 762927 CTTGCTCATATAACA TCCTATCCAAG AAAT TTCGGATAGGA TTTTAGCACAAGCAA TERM 1229 762952 - 762927 - H 70 -8.4 -3.31726 | opp_overlap 762927, overlap 762925 CTTGCTCATATAACA TCCTATCCAA GAAATT TCGGATAGGA TTTTAGCACAAGCAA APL_0668 763097 - 763909 + | hypothetical protein TERM 1230 763974 - 763962 - g 71 -3.4 -5.02074 | opp_overlap 763972 TGATTTTCTAAAAAA TACC GCATT GGTA GGAGCTGGCTTATTG TERM 1231 763972 - 764000 + G 100 -11 -4.55798 | opp_overlap 763962 AAAAATACCGCATTG GTAGGAGCTGGC TTATT GTCGGCTCCTGC TTTTGCTTTAGAATC APL_0669 763924 - 765114 + | putative iron dependent peroxidase TERM 1232 765549 - 765537 - g 75 -9.1 -3.65036 | opp_overlap 765537, overlap 765531 TTAAGCAAATCAGAA TGGCG GCA CGCCA TTTCGGTAAAAATTG TERM 1233 765537 - 765549 + G 75 -9.1 -3.65827 | opp_overlap 765531 765537 TTAAGCAAATCAGAA TGGCG GCA CGCCA TTTCGGTAAAAATTG APL_0670 765125 - 765745 + | putative Fe2+/Pb2+ permease TERM 1234 765782 - 765756 - T 100 -13.8 -4.10781 | opp_overlap 765761, overlap 765761 AATAATTCAGATAAA GCAAAGGGCGTT TAA AACGCCCTTTTC CCTTAAAACAAATCC TERM 1235 765777 - 765761 - T 100 -12.3 -4.18042 | opp_overlap 765761, overlap 765756 TTCAGATAAAGCAAA GGGCGTT TAA AACGCCC TTTTCCCTTAAAACA TERM 1236 765761 - 765777 + T 100 -12.3 -4.27316 | opp_overlap 765761 765756 TTCAGATAAAGCAAA GGGCGTT TAA AACGCCC TTTTCCCTTAAAACA trpH 766603 - 765785 - | TrpH-like protein APL_0672 767197 - 766607 - | hypothetical protein sbcB 768758 - 767214 - | exonuclease I TERM 1237 767434 - 767450 + g 70 -8 -3.66139 | opp_overlap 767429, overlap 767445 AAGCTATCAATCGCT TCGGCA AATTG TGCCGA TTTGGCATCTATCTG TERM 1238 767667 - 767655 - G 75 -5.5 -4.82901 | TGCCGGTGAGAAAAA GCCGT CAT ACAGC GTGGTTTCCACATTC TERM 1239 768648 - 768627 - G 85 -7.3 -4.77165 | opp_overlap 768629, overlap 768605 768629 TTGCTTACAATAAAA CATCACCGG CTCA CCGATGATA TTAAAATCACTATCG TERM 1240 768646 - 768629 - G 74 -7.7 -4.00512 | opp_overlap 768629, overlap 768605 768627 GCTTACAATAAAACA TCACCGG CTCA CCGATGA TATTAAAATCACTAT TERM 1241 768885 - 768860 - R 100 -10.4 -5.60993 | GCGGGCATAAAAAAA CCCGGCACCA AGAAAG CGATGCCGGG GGAGGTCTTACCTAA APL_0674 770406 - 769000 - | hypothetical protein TERM 1242 769356 - 769334 - G 70 -7.6 -3.57792 | overlap 769336 GCACCTATTGTTAAA GACGGCGTAA ATA TTCCGCCGGC AATACCCGTCCAATA TERM 1243 769354 - 769336 - G 71 -8.8 -3.36694 | overlap 769334 ACCTATTGTTAAAGA CGGCGTAA ATA TTCCGCCG GCAATACCCGTCCAA asnC 770614 - 772017 + | asparaginyl-tRNA synthetase TERM 1244 772063 - 772028 - T 100 -14.2 -3.57106 | opp_overlap 772035, overlap 772029 772035 TCTAATCGAAACTAA CGAAAAAGGGCGAATA AGAT TATTCGCCCTTTTGCA TATAAGCGGTCAAAA TERM 1245 772062 - 772029 - T 100 -15.5 -2.73781 | opp_overlap 772035, overlap 772028 772035 CTAATCGAAACTAAC GAAAAAGGGCGAATA AGAT TATTCGCCCTTTTGC ATATAAGCGGTCAAA TERM 1246 772035 - 772056 + T 100 -13.1 -4.2349 | opp_overlap 772035 772029 772028 GAAACTAACGAAAAA GGGCGAATA AGAT TATTCGCCC TTTTGCATATAAGCG TERM 1247 772056 - 772035 - T 100 -13.1 -4.95957 | opp_overlap 772035, overlap 772029 772028 GAAACTAACGAAAAA GGGCGAATA AGAT TATTCGCCC TTTTGCATATAAGCG TERM 1248 772107 - 772069 - T 85 -10.4 -3.48276 | opp_overlap 772069, overlap 772079 CCCTTTTGCATATAA GCGGTCAAAATTTGCAAA AAA TCAGCAAAATTTAACCGC TTGTTGAACTATCCT APL_0676 773122 - 772121 - | hypothetical protein TERM 1249 773191 - 773174 - R 100 -11.3 -5.69262 | overlap 773184 GTAGAAAAACAAAAA GGGCGTA AGAT TACGCCC TCCGCAAAATTAGAA APL_0677 773772 - 773209 - | hypothetical protein TERM 1250 773706 - 773690 - G 73 -10.1 -3.05816 | opp_overlap 773689 773690, overlap 773699 TTACCCGTTACCGAA CGAGACG AAC CGCCTCG CTTTGCTTCCGCAAC efp 773923 - 774489 + | elongation factor P TERM 1251 774556 - 774506 - f 91 -12 -3.82191 | opp_overlap 774511, overlap 774511 CTAATTTTATAAGAA TTTAAGCGGTCGAATTTCTTGCAA ATT TTGCAAACAATTCGACCGCTTTTT TATTTCTCTCTGTTT TERM 1252 774511 - 774551 + F 100 -18.5 -5.76237 | opp_overlap 774506 774511 TTTATAAGAATTTAA GCGGTCGAATTTCTTGCAA ATT TTGCAAACAATTCGACCGC TTTTTTATTTCTCTC TERM 1253 774551 - 774511 - f 100 -20.7 -3.31443 | opp_overlap 774511, overlap 774506 TTTATAAGAATTTAA GCGGTCGAATTTCTTGCAA ATT TTGCAAACAATTCGACCGC TTTTTTATTTCTCTC TERM 1254 775690 - 775678 - g 70 -5.5 -4.57516 | overlap 775679 AGATTTAAACGAAAA CGCAC CAC GTGCA ATGGCAGTAATCAAC glnS 774644 - 776314 + | glutaminyl-tRNA synthetase TERM 1255 776327 - 776344 + T 83 -6.2 -5.09173 | opp_overlap 776327 TAATTTTGATAATAA GCGGTC AAAAAC GGCCGC TTTTTTACACTATTC TERM 1256 776545 - 776519 - T 79 -8.8 -3.75229 | opp_overlap 776525, overlap 776525 TAAACTAGATTTAAA CAAAAACGGTCA TTA CGACCGTTTTTT TATGCTTTTTTATTA TERM 1257 776525 - 776539 + T 100 -7.1 -5.77632 | opp_overlap 776519 776525 AGATTTAAACAAAAA CGGTC ATTAC GACCG TTTTTTTATGCTTTT TERM 1258 776539 - 776525 - T 89 -7.8 -5.31519 | opp_overlap 776525, overlap 776519 AGATTTAAACAAAAA CGGTCA TTA CGACCG TTTTTTTATGCTTTT APL_0680 777936 - 776545 - | transport protein TERM 1259 777110 - 777100 - G 71 -2.4 -5.10208 | TAACGGTAATAAAAA CGGG ATA CCGG AACCGCTTAACCGAA TERM 1260 777258 - 777242 - G 74 -4.4 -4.97957 | CAGATAAGAATAAAA CCGACT GTTAA AATCGG TACGGCTCTCATAAC TERM 1261 777509 - 777489 - G 71 -6.7 -4.08945 | overlap 777478 777490 ACCAGCCGCCTAAAA TCGGCCCGA GGA TCGGTCCGG TTAAACCTGCCATCG TERM 1262 777508 - 777490 - G 76 -10.2 -3.05046 | overlap 777478 777489 CCAGCCGCCTAAAAT CGGCCCGA GGA TCGGTCCG GTTAAACCTGCCATC TERM 1263 777709 - 777699 - G 86 -6.8 -5.06472 | overlap 777700 777701 ATACAAATAACAAAA TCGC ACT GCGA AATACTCGCAATGTA TERM 1264 778108 - 778087 - R 87 -6.6 -5.42259 | opp_overlap 778087 CTATCGCTAAAAAAA GCAAGTAG GTTAAT CCACTTGC TTTTCAAACTTAGTA APL_0681 780226 - 778118 - | putative soluble lytic murein transglycosylase precursor TERM 1265 778942 - 778960 + g 75 -3 -5.23016 | opp_overlap 778924 778925 GCTCTTTAGACAGAG CGATAAGC GAT GCTTCCCG TTTTTTCGCTTCTTT hpt 780874 - 780335 - | yypoxanthine phosphoribosyltransferase TERM 1266 780976 - 780940 - R 100 -9.8 -4.71222 | gap 1, opp_overlap 780939 780936 780945, overlap 780944 780945 ATACTAAAATCAAAA TAAATTTGGCATAACAC CAAA ATGTTATGCC-AATTTA CTTATTTTAGTTGTC TERM 1267 780973 - 780944 - R 95 -8.7 -4.86613 | opp_overlap 780939 780936 780945, overlap 780940 780945 TAAAATCAAAATAAA TTTGGCATAACAC CAAA ATGTTATGCCAAT TTACTTATTTTAGTT TERM 1268 780945 - 780972 + r 100 -11.5 -4.21737 | opp_overlap 780944 780940 780945, overlap 780939 780936 AAAATCAAAATAAAT TTGGCATAACA CCAAAA TGTTATGCCAA TTTACTTATTTTAGT TERM 1269 780972 - 780945 - R 90 -12.2 -3.49527 | opp_overlap 780945 780939 780936, overlap 780944 780940 AAAATCAAAATAAAT TTGGCATAACAC CAAA ATGTTATGCCAA TTTACTTATTTTAGT metB 782114 - 780978 - | cystathionine gamma-synthase dapB 783037 - 782228 - | dihydrodipicolinate reductase mtfA 784237 - 783146 - | putative RNA 2'-O-ribose methyltransferase TERM 1270 784378 - 784430 + r 81 -7.9 -4.43879 | gap 1, opp_overlap 784396, overlap 784396 TGAAAACAATAGGTG GCAGGGAGAATGCAAAAATCCCTG CGGGAA CAGGGATT-TTGTGTTTGACCTGC TTTTGATTAACTCAT TERM 1271 784396 - 784413 + r 83 -7 -4.79451 | opp_overlap 784396, overlap 784378 GGGAGAATGCAAAAA TCCCTG CGGGAA CAGGGA TTTTGTGTTTGACCT TERM 1272 784413 - 784396 - R 83 -7.7 -4.78149 | opp_overlap 784396 784378 GGGAGAATGCAAAAA TCCCTGC GGGA ACAGGGA TTTTGTGTTTGACCT TERM 1273 784592 - 784616 + r 100 -10 -5.41143 | opp_overlap 784576 CAAAAACAATGTTTT CCGCCTATTC TAACT GATTAGGCGG TTTTTTTAGCACGTA APL_0686 785013 - 784609 - | hypothetical protein TERM 1274 784690 - 784672 - G 100 -8.8 -5.31877 | opp_overlap 784676 ACCGATCATAAAAAA TACGCCGC CAA GCGGTGTA CTCCACACAAATAAT TERM 1275 784989 - 784975 - G 73 -2.7 -5.10968 | AGCAATACAGAAAAA GCCGC TAATT GCTGC AAATAAGATAAATTT TERM 1276 785051 - 785032 - H 79 -3.6 -5.40072 | overlap 785035 TTCTCCTTAAAAAAA TAATGCTA AATA TAGCATAA AATTTATTACACATT TERM 1277 785048 - 785035 - H 74 -5.3 -4.79949 | overlap 785032 TCCTTAAAAAAATAA TGCTA AATA TAGCA TAAAATTTATTACAC TERM 1278 786114 - 786092 - g 80 -4.8 -5.14563 | opp_overlap 786092 TGGGTCATTAAAAAA TTCGGTACGC ACT GGTTACCGAA ATTATTCGCCTTAAA dld 785117 - 786808 + | D-lactate dehydrogenase TERM 1279 786891 - 786927 + T 100 -11.1 -4.13271 | opp_overlap 786896, overlap 786896 AGTTAATATAAATAT AAAAACGCACTAAAG CCCTTCA CTTTAGTGCGTTTTG TTTACTTATTCTATA TERM 1280 786922 - 786896 - T 100 -11.7 -5.26155 | opp_overlap 786891 786896 ATATAAATATAAAAA CGCACTAAAGC CCTTC ACTTTAGTGCG TTTTGTTTACTTATT TERM 1281 786896 - 786922 + T 100 -11 -5.03713 | opp_overlap 786896, overlap 786891 ATATAAATATAAAAA CGCACTAAAG CCCTTCA CTTTAGTGCG TTTTGTTTACTTATT torZ 789420 - 786946 - | trimethylamine-N-oxide reductase precursor TERM 1282 786987 - 787001 + g 70 -9.2 -2.74645 | overlap 786985 TAAATACTGTTACTT CCGGTG CAA CGCCGG TAAATTTCTCTACTT TERM 1283 787708 - 787722 + g 73 -7.2 -4.16033 | overlap 787704 CCAATCCATTTCCGA TTTACC TTC GGTAAA TTCTTGTTCTTTACC TERM 1284 788994 - 789012 + g 83 -8.8 -4.17878 | opp_overlap 788983 AAATTGCACTTGGGC CATGTGCG TCA CGCACACG TTTCATTTCGTTTGC torY 790734 - 789616 - | cytochrome c-type protein TorY TERM 1285 791415 - 791402 - g 75 -3.1 -5.16237 | AACGGCATTAAAAAA GTAGC TTTG ACTAC TAACGGTTATCGTAT moaA 791084 - 792106 + | molybdenum cofactor biosynthesis protein A TERM 1286 792682 - 792670 - g 73 -9.1 -3.51708 | CACTGTGCAAATTAA CCGGT AAA ACCGG TGTGGAAATGGAAGC moaC 792354 - 792830 + | molybdenum cofactor biosynthesis protein C moaD 792852 - 793097 + | molybdopterin-converting factor subunit 1 moaE 793098 - 793553 + | molybdopterin-converting factor subunit 2 TERM 1287 793572 - 793612 + F 76 -2.8 -5.47431 | ACGCCCTTAGATTCA CGGAATG-TGTCAGAAAGTT TAT AATATTC-GACAACATTCTG TTTTTTATATATTGA TERM 1288 793680 - 793662 - g 83 -9.6 -3.92869 | TTATTGATTTACAAA TCGCTGCT GAG AACAGCGA AAATCTCCCGTCTTT APL_0694 793634 - 794125 + | putative metalloprotease TERM 1289 794173 - 794153 - g 75 -8.9 -3.60627 | opp_overlap 794153 TGATTTTAGCTGAAA TGCCTCCGC TTG ACGGGGGCA TTGTTATTCATAGCG TERM 1290 794153 - 794173 + G 89 -10.4 -3.99374 | opp_overlap 794153 TGATTTTAGCTGAAA TGCCTCCG CTTGA CGGGGGCA TTGTTATTCATAGCG TERM 1291 794797 - 794774 - g 75 -3.1 -5.24531 | overlap 794776 ATCTGTTACAAAAAA TCGCGGCAA ACCAAA TTGCAGCAA AGAGTTGGTTATTTA APL_0695 794137 - 795927 + | hypothetical protein TERM 1292 795947 - 795977 + T 86 -12.7 -2.7464 | opp_overlap 795953, overlap 795953 TTGCAAATCGCTATA AAAAAACCACCGC TTATT GCGGTGGTTTTTC ATTTACGAATACATT TERM 1293 795971 - 795953 - T 100 -11.7 -5.61596 | opp_overlap 795947 795953 ATCGCTATAAAAAAA CCACCGC TTATT GCGGTGG TTTTTCATTTACGAA TERM 1294 795953 - 795971 + T 100 -11.7 -4.98531 | opp_overlap 795953, overlap 795947 ATCGCTATAAAAAAA CCACCGC TTATT GCGGTGG TTTTTCATTTACGAA topA 798600 - 795991 - | DNA topoisomerase I TERM 1295 796208 - 796224 + g 76 -7.9 -4.12198 | overlap 796209 TCGGCAACTTTTGGC GCGCGTG TTT CACGCGA TTTTGGGAAATTATG TERM 1296 796209 - 796223 + g 83 -11.4 -3.06837 | overlap 796208 CGGCAACTTTTGGCG CGCGTG TTT CACGCG ATTTTGGGAAATTAT TERM 1297 796336 - 796354 + g 79 -6.6 -4.62302 | CGTCGGCTCTTCGCG CGGCGGAG CCA CTTCACCG TTTTTCAGAATCTTA TERM 1298 797412 - 797424 + g 100 -9.1 -4.69027 | opp_overlap 797412 AAATAAGATCATACA GACGC TCT GCGTC TTTTTCCATACCTTT TERM 1299 797733 - 797758 + g 70 -3.9 -4.90455 | overlap 797699 TTGAAGTAATAAACG GCGGGCTTGCT TTTG AGGAAGTCGGC TTTTTATCAATCTCT TERM 1300 797810 - 797778 - G 84 -10.7 -3.58037 | opp_overlap 797778 797786, overlap 797785 TATCAATCTCTGAAA CGATAAATTCGCTAC CTT GTAACGATTTTACCG CTTCATCCGCTTGTT APL_0697 798742 - 799638 + | putative HTH-type transcriptional regulator TERM 1301 799680 - 799702 + T 95 -12.8 -3.6106 | opp_overlap 799680 TTTGAAAAAACAAAA CGCCTTTCTT TTA AGGAAAGGCG TTTGCGAATATTCAA TERM 1302 799702 - 799680 - T 100 -10.6 -5.42198 | opp_overlap 799680 TTTGAAAAAACAAAA CGCCTTTCTT TTA AGGAAAGGCG TTTGCGAATATTCAA argA 801045 - 799732 - | N-acetylglutamate synthase TERM 1303 801142 - 801179 + r 100 -15.1 -3.86481 | opp_overlap 801142, overlap 801131 TCTGTCCATAAAAAA GCGGTTGGATTTGCAAA TTTT TTTACAAATTCAACCGC TTATTATCGCTTGTT TERM 1304 801179 - 801142 - R 100 -15.1 -5.24129 | opp_overlap 801131 801142 TCTGTCCATAAAAAA GCGGTTGGATTTGCAAA TTTT TTTACAAATTCAACCGC TTATTATCGCTTGTT aroA 802491 - 801193 - | 3-phosphoshikimate 1-carboxyvinyltransferase TERM 1305 802198 - 802210 + g 75 -9.1 -3.73775 | CGTTAAAGGTCGCAT TGCCG TAC CGGCA TTTCCTAAAAATAAC hisC 803599 - 802505 - | histidinol-phosphate aminotransferase TERM 1306 803780 - 803743 - R 95 -12.9 -3.85698 | opp_overlap 803746, overlap 803746 TCTTCCCTTCATAAA CAAGCGGTCGTAAGTCT AGGA AAATTTACGACCGCTTA TACATTCATATTAAG TERM 1307 803746 - 803777 + r 93 -12.4 -3.44792 | opp_overlap 803746 803743 TCCCTTCATAAACAA GCGGTCGTAAGTCT AGGA AAATTTACGACCGC TTATACATTCATATT TERM 1308 803777 - 803746 - R 100 -12.4 -4.06419 | opp_overlap 803746, overlap 803743 TCCCTTCATAAACAA GCGGTCGTAAGTCT AGGA AAATTTACGACCGC TTATACATTCATATT APL_0701 805067 - 803799 - | O-acetylhomoserine (thiol)-lyase TERM 1309 805230 - 805248 + r 95 -8.8 -5.01422 | opp_overlap 805230 CGACCTGTAAAAAAA CCACCTGC ACG GCAGATGG TTTCTTTTTATATAC TERM 1310 805248 - 805230 - R 100 -11 -5.42259 | opp_overlap 805230 CGACCTGTAAAAAAA CCACCTGC ACG GCAGATGG TTTCTTTTTATATAC serC 806361 - 805273 - | phosphoserine aminotransferase APL_0703 809425 - 806555 - | ATP-dependent helicase TERM 1311 807192 - 807178 - G 100 -8.6 -4.93365 | TCGCATAATCAAAAA CCAATG TCG CATTGG GCGTATGGGCATTTA TERM 1312 809295 - 809315 + g 70 -7.5 -3.75229 | opp_overlap 809294 809295 809291, overlap 809296 TTGAGTGCAAATAAT GCCGCATCA ATC TGGTGCGGA TTTAAATCTACTTTG TERM 1313 809296 - 809314 + g 77 -11 -2.84414 | opp_overlap 809294 809295 809291, overlap 809295 TGAGTGCAAATAATG CCGCATCA ATC TGGTGCGG ATTTAAATCTACTTT APL_0704 812742 - 809425 - | hypothetical protein TERM 1314 810596 - 810611 + g 76 -2.6 -5.3671 | gap 1 AGCTGTACCATTTCT TGGCGTT TAA AAC-CCA TTTTTTGGTTATCTT TERM 1315 811128 - 811138 + g 71 -2.4 -5.12617 | opp_overlap 811128 CTCCCACATTAATCA GTGC AAA GCTC TTTTTTAGATCATTA TERM 1316 812009 - 811984 - G 74 -4.7 -4.81249 | gap 1 GTTTAAATCCAAAAA GCG-ATCGACCG CCA CCGTCAATTCGC CATCTTTATCTGCCA TERM 1317 812064 - 812079 + g 77 -4.6 -4.96501 | opp_overlap 812059 TATCATTAAACAAGC CCGTGC CTTG GAACGG TTTATTTTTATCAAA TERM 1318 812759 - 812787 + r 71 -8.8 -3.1372 | opp_overlap 812752 812753 GTTACAAATCTCCCC CCGCCCCTCTTT ACTAA AGAGGGGGGCGA TCTTGATAAAGAATA APL_0705 816032 - 813144 - | putative methylation subunit, type III restriction-modification system TERM 1319 815268 - 815257 - G 71 -3 -4.96848 | opp_overlap 815237 815257, overlap 815258 TTTTTGATATAAAAA TCAA GCTC TTGA TTTAAAAACTTGCCG TERM 1320 816229 - 816190 - R 90 -11.1 -3.87075 | opp_overlap 816196, overlap 816196 AGCACCGCTTATAAA TAAAAATCCTTGTAATT GATAAA AATTACAAGGATTTTAA TAGAATTTAGTTAAG TERM 1321 816223 - 816196 - R 100 -10.1 -5.38054 | opp_overlap 816196, overlap 816190 GCTTATAAATAAAAA TCCTTGTAATT GATAAA AATTACAAGGA TTTTAATAGAATTTA TERM 1322 816196 - 816223 + r 100 -10.1 -4.29432 | opp_overlap 816190 816196 GCTTATAAATAAAAA TCCTTGTAATT GATAAA AATTACAAGGA TTTTAATAGAATTTA APL_0706 817184 - 816312 - | putative HTH-type transcriptional regulator TERM 1323 816551 - 816571 + g 76 -7.6 -4.08216 | overlap 816564 816566 TAATCGCAATGGTTT TCGCATGA TTTTT TCGTGCGA TTTTCAACGCACTGA TERM 1324 817095 - 817116 + g 73 -5.9 -4.44277 | opp_overlap 817083 817100, overlap 817100 AATTTCAGGCTGAGC CAAAATCGC CGAT GCGATTTTC TTTTCCGTTTTGGTC TERM 1325 817100 - 817111 + g 85 -5.8 -5.14698 | opp_overlap 817100, overlap 817095 CAGGCTGAGCCAAAA TCGC CGAT GCGA TTTTCTTTTCCGTTT APL_0707 817661 - 817194 - | hypothetical protein TERM 1326 817830 - 817851 + r 90 -11.7 -3.53811 | opp_overlap 817829 817828 AATTTTATAAAACGC GAGGCATAA ATAT TTATGCCTC TTTGACAGGACTAAC ppx 819370 - 817862 - | exopolyphosphatase APL_0709 819579 - 819914 + | hypothetical protein TERM 1327 820912 - 820893 - g 85 -5.6 -5.243 | opp_overlap 820893 820910 CAAATGACGAAAAAA CGCAACAG CAAT CCGATGCG ATTATTAAACCGCTA lysC 820409 - 821761 + | aspartate kinase III TERM 1328 821780 - 821828 + T 100 -16.3 -3.64703 | opp_overlap 821782 821821, overlap 821781 821785 TAAACTCCAAATATA AACAAGCGGTTGATTTTTGTAAA AAT TTAACAAAAATCAACCGCTTGCA TTTCGATAGAAGCGC TERM 1329 821781 - 821827 + T 100 -19.8 -2.78679 | opp_overlap 821782 821821, overlap 821780 821785 AAACTCCAAATATAA ACAAGCGGTTGATTTTTGTAAA AAT TTAACAAAAATCAACCGCTTGC ATTTCGATAGAAGCG TERM 1330 821826 - 821782 - T 100 -23.3 -4.3453 | opp_overlap 821781 821780 821785, overlap 821821 AACTCCAAATATAAA CAAGCGGTTGATTTTTGTAAA AAT TTAACAAAAATCAACCGCTTG CATTTCGATAGAAGC TERM 1331 821785 - 821823 + T 100 -19.2 -3.29324 | opp_overlap 821782 821821, overlap 821781 821780 TCCAAATATAAACAA GCGGTTGATTTTTGTAAA AAT TTAACAAAAATCAACCGC TTGCATTTCGATAGA APL_0711 822336 - 821887 - | transcriptional regulator NrdR APL_0712 822575 - 822336 - | hypothetical protein dnaB 824076 - 822613 - | replicative DNA helicase TERM 1332 823413 - 823433 + g 100 -5.3 -5.96894 | opp_overlap 823413 CAACGATAATTAAAT CCGACGGTT GTA AACCTGCGG TTTTTTTATTTAAAT TERM 1333 823738 - 823751 + g 76 -9.5 -3.42256 | opp_overlap 823737 823736, overlap 823736 ATAAGCAAGAATATT CGCCG CACT CGGCG TGTTCTTAGATAACT TERM 1334 824371 - 824385 + G 78 -10 -3.46534 | opp_overlap 824371 824370, overlap 824369 CGTTTACTCAAACAC CGGCTA AGT TAGCCG TCTTTGATGCGGTTG TERM 1335 824385 - 824371 - g 71 -10 -2.64144 | opp_overlap 824369 824371, overlap 824370 CGTTTACTCAAACAC CGGCTA AGT TAGCCG TCTTTGATGCGGTTG APL_0714 824256 - 825164 + | ABC transport system periplasmic protein TERM 1336 825195 - 825220 + F 79 -10.6 -2.90373 | opp_overlap 825195, overlap 825192 CGTTAGATAGATAAA TGGCACATAT CTCAAT ATATGTGCCA TCGTTGATTATTAAT TERM 1337 825220 - 825195 - f 100 -10.6 -4.17296 | opp_overlap 825192 825195 CGTTAGATAGATAAA TGGCACATAT CTCAAT ATATGTGCCA TCGTTGATTATTAAT APL_0715 825251 - 826198 + | ABC transport system permease protein APL_0716 826261 - 827139 + | iron(III) ABC transporter, permease protein APL_0717 827141 - 827899 + | iron(III) ABC transporter, ATP-binding protein APL_0718 828088 - 828768 + | hypothetical protein APL_0719 828778 - 830040 + | putative phosphate permease TERM 1338 830053 - 830081 + F 87 -9.8 -4.05788 | gap 1, opp_overlap 830060 TAATTTTATCGTTCG GGGAAAG-TATGT TTAA ACATATCTTTCCC TTTCATTTAAAAGGA APL_0720 830104 - 830709 + | hypothetical protein TERM 1339 830721 - 830766 + T 100 -12.9 -4.60487 | opp_overlap 830725 830745, overlap 830722 830725 ATAGGCTTCTATCAA TTAAGCGGTTATTTTTGCAAA AAAG TTTGTAAAAACAACCGCTTAC TTTTTGCGAATACTC TERM 1340 830722 - 830765 + T 100 -16.4 -3.3581 | opp_overlap 830725 830745, overlap 830721 830725 TAGGCTTCTATCAAT TAAGCGGTTATTTTTGCAAA AAAG TTTGTAAAAACAACCGCTTA CTTTTTGCGAATACT TERM 1341 830725 - 830762 + T 100 -13.7 -3.81256 | opp_overlap 830725 830745, overlap 830722 830721 GCTTCTATCAATTAA GCGGTTATTTTTGCAAA AAAG TTTGTAAAAACAACCGC TTACTTTTTGCGAAT TERM 1342 830762 - 830725 - T 95 -13.7 -3.39895 | opp_overlap 830725 830722 830721, overlap 830745 GCTTCTATCAATTAA GCGGTTATTTTTGCAAA AAAG TTTGTAAAAACAACCGC TTACTTTTTGCGAAT APL_0721 830990 - 830763 - | hypothetical protein APL_0722 831512 - 830997 - | hypothetical protein TERM 1343 831569 - 831548 - R 100 -10.9 -4.83169 | overlap 831518 831534 ACCCTTTGATAAAAA GGCACAAGC CTAA ACTTGTGCC ATAAAAAATTTGGAA tgt 832733 - 831585 - | queuine tRNA-ribosyltransferase TERM 1344 832625 - 832645 + g 73 -9 -3.54307 | gap 1 CCGTACCGTAGGTAC CGACCGGCA TAAA TGCCGG-CG TTTCAACCACATATT TERM 1345 832687 - 832714 + g 78 -5.5 -4.92777 | gap 1, opp_overlap 832687 CGAGAAAACGTTAAA CGACC-GCGACG CGCAT TGCCGCTGGTCG TTTTTAATTCATATT APL_0724 833056 - 833628 + | hypothetical protein TERM 1346 833671 - 833681 + F 79 -5.4 -5.09225 | CAAACATTTCCGATT GTGA GGT TCAC TTTTTTGACTACAAT cspD 833751 - 833942 + | cold shock-like protein CspD TERM 1347 833998 - 833962 - f 100 -19.7 -3.37071 | opp_overlap 833962, overlap 833951 AAACCCGATTTACAA GCGGTCGAATTTGTATA ATT TTTACAAATTCGACCGC TTTTTTATTCTATGC TERM 1348 833962 - 833998 + F 100 -19.7 -5.60689 | opp_overlap 833951 833962 AAACCCGATTTACAA GCGGTCGAATTTGTATA ATT TTTACAAATTCGACCGC TTTTTTATTCTATGC APL_0726 834060 - 834776 + | carbonic anhydrase TERM 1349 834775 - 834761 - f 72 -5.8 -4.30448 | AAATCCAATTGAAAA TAATCA TAT TGATTA ACCGTATTTAAAAAT TERM 1350 834811 - 834790 - f 83 -7.4 -4.67011 | opp_overlap 834785 834790 AACCGTATTTAAAAA TAGTGTGA TAAATC TCACACTA TTTCCTTTTCTCACT TERM 1351 834790 - 834811 + F 81 -7.4 -4.27483 | opp_overlap 834790, overlap 834785 AACCGTATTTAAAAA TAGTGTGA TAAATC TCACACTA TTTCCTTTTCTCACT TERM 1352 835698 - 835686 - g 71 -3.3 -4.99134 | overlap 835696 AGTGCAAATTAAAAA GGCAT TAA AAGCC CTATTAGTGGCAAAA TERM 1353 836142 - 836121 - g 82 -5.8 -5.03747 | opp_overlap 836125, overlap 836122 AAATCTTGCAAAAAA TCAAGCGG ATTTGA CCGCTTGG TGGCAACAGATTAAT TERM 1354 836141 - 836122 - g 78 -9.3 -3.61164 | opp_overlap 836125, overlap 836121 AATCTTGCAAAAAAT CAAGCGG ATTTGA CCGCTTG GTGGCAACAGATTAA ilvI 835093 - 836817 + | acetolactate synthase 3 catalytic subunit TERM 1355 837245 - 837234 - g 75 -5.8 -4.67697 | CGGTAAAACAAGAAA CGAC AATA GTCG AAATCGTACGATCCG ilvH 836810 - 837301 + | acetolactate synthase 3 regulatory subunit TERM 1356 837312 - 837330 + T 100 -11 -5.10933 | TATAACATTTTACAG GGCGAACG CAT TGTTCGCC TTTTGTTTTAACTGA TERM 1357 837409 - 837386 - T 100 -12.6 -5.40072 | opp_overlap 837386 TTTTTTGTAAAAAAA TAGCTAATCC TTTC GGATTAGCTA TTTGAACCTAACGAA TERM 1358 837386 - 837409 + T 95 -12.6 -3.57144 | opp_overlap 837386 TTTTTTGTAAAAAAA TAGCTAATCC TTTC GGATTAGCTA TTTGAACCTAACGAA pmbA 838920 - 837571 - | antibiotic maturation factor APL_0730 839028 - 839558 + | hypothetical protein APL_0731 839603 - 839974 + | hypothetical protein TERM 1359 840020 - 839983 - f 100 -16.5 -3.36671 | opp_overlap 839983, overlap 839993 ACGCTAATCTTATAA GCGGTCAAAATTTGCAA TTTT TTGCAAAATTCGACCGC TTTTCCATTATCTAT TERM 1360 839983 - 840020 + F 100 -14.3 -4.3487 | opp_overlap 839983 839993 ACGCTAATCTTATAA GCGGTCAAAATTTGCAA TTTT TTGCAAAATTCGACCGC TTTTCCATTATCTAT TERM 1361 840010 - 839993 - f 75 -7.1 -4.12198 | opp_overlap 839983, overlap 839983 TATAAGCGGTCAAAA TTTGCAA TTTT TTGCAAA ATTCGACCGCTTTTC TERM 1362 840151 - 840128 - g 71 -8.2 -3.57144 | CGCTTGATGTGGAAA CCCATTTAGT ACTC ACTAAAGGGG CGGAAATGACTCGTT ubiX 840034 - 840606 + | aromatic acid decarboxylase TERM 1363 841046 - 841056 + G 73 -5.4 -4.60889 | GATTTTAGACTTCTT TACC GCC GGTA TTTTTGCCGCTACTT APL_0733 840609 - 841322 + | hypothetical protein TERM 1364 841354 - 841332 - f 73 -8.4 -3.68962 | opp_overlap 841332 841334 841353, overlap 841334 GCTTAATAGATACAA CATCCCACTG TTA CGGTGGGATA TTTTAAAAGAATATA TERM 1365 841332 - 841354 + F 81 -8.4 -4.09243 | opp_overlap 841332 841334, overlap 841334 841353 GCTTAATAGATACAA CATCCCACTG TTA CGGTGGGATA TTTTAAAAGAATATA TERM 1366 841352 - 841334 - f 75 -8.8 -3.42083 | opp_overlap 841332 841334, overlap 841332 TTAATAGATACAACA TCCCACTG TTA CGGTGGGA TATTTTAAAAGAATA TERM 1367 841334 - 841352 + F 89 -11 -3.6422 | opp_overlap 841334 841332, overlap 841332 TTAATAGATACAACA TCCCACTG TTA CGGTGGGA TATTTTAAAAGAATA APL_0734 841369 - 841818 + | hypothetical protein TERM 1368 841828 - 841804 - T 76 -4.4 -5.19879 | gap 1, opp_overlap 841796, overlap 841796 841798 841805 841806 TGGGAAAGAGAAAAA GTCTCGTTTTC CTAA GAAAACAAG-C GGTCAGATTTCACTC APL_0735 842202 - 841891 - | translation initiation factor Sui1 TERM 1369 842262 - 842243 - R 83 -4.9 -5.45802 | CGCTTAAAACAAAAA GGCGAGC AAAAAA GCCCACC TTATTTAATCCGTGA pyrF 842974 - 842282 - | orotidine 5'-phosphate decarboxylase TERM 1370 842647 - 842626 - G 71 -6.6 -4.10657 | CCATACTGGTTAAAA CCGTTACC GCAATA AGTAACGG CGCATCTTTACCGTA APL_0737 844195 - 842999 - | hypothetical protein APL_0738 844485 - 844195 - | hypothetical protein ihfB 844835 - 844554 - | integration host factor beta-subunit TERM 1371 844892 - 844857 - R 82 -9.9 -3.68351 | opp_overlap 844862, overlap 844862 CTCTGATTATTTAAA TTAAAGCGGATATGT CTTTCC ACATACCCGCTTTTA ATTAGAAAGGCTCTA TERM 1372 844862 - 844887 + r 81 -7.6 -4.4078 | opp_overlap 844857 844862 ATTATTTAAATTAAA GCGGATATGT CTTTCC ACATACCCGC TTTTAATTAGAAAGG TERM 1373 844887 - 844862 - R 93 -9.8 -4.08887 | opp_overlap 844862, overlap 844857 ATTATTTAAATTAAA GCGGATATGT CTTTCC ACATACCCGC TTTTAATTAGAAAGG rpsA 846573 - 844909 - | 30S ribosomal protein S1 TERM 1374 846661 - 846641 - R 80 -10.5 -2.96249 | overlap 846638 GGTTAGTAATAATGA CCGAACACA TCC TATGTTCGG CGAATAAATTAAAAT cmkA 847344 - 846670 - | cytidylate kinase degS 848405 - 847374 - | protease DegS precursor TERM 1375 847826 - 847845 + g 76 -10.8 -2.66272 | AAGCACCGCCGGAAT TGCCTCTA TTGA TAGAGGCA TCGGTTTGAATAAAG TERM 1376 848541 - 848520 - R 100 -9.5 -5.66684 | opp_overlap 848520 TAAGTTATAAAAAAA GCCCTAATC TTAC GATTAAGGC TTTATATATGGTGCT TERM 1377 848520 - 848541 + r 75 -7.3 -4.15632 | opp_overlap 848520 TAAGTTATAAAAAAA GCCCTAATC TTAC GATTAAGGC TTTATATATGGTGCT secG 848980 - 848654 - | preprotein translocase subunit SecG topB2 851049 - 849112 - | DNA topoisomerase III TERM 1378 849924 - 849942 + g 79 -3.1 -5.40464 | overlap 849927 AACGATTACGAATTT CCGGA TTAACCGCC TCCGG TTTTTCTTTATACTC TERM 1379 850723 - 850746 + g 82 -3 -5.4477 | overlap 850715 TTCTCGGTCCGGGTC GCCGGCGTTT ACCA ATACGTCCGC TTTTTTTACCAATTT TERM 1380 852460 - 852450 - R 81 -8.2 -4.1964 | opp_overlap 852443 CTTAACATTGCAAAA CCGG AAG CCGG CTTAGGCACTTACTA TERM 1381 852604 - 852582 - R 100 -12.1 -5.18355 | opp_overlap 852582 TTCAAAAACTAAAAA CGCACCTTA GTATT TAAGGTGCG TTTTTTGTTAGTTCA TERM 1382 852582 - 852604 + r 100 -12.8 -5.5604 | opp_overlap 852582 TTCAAAAACTAAAAA CGCACCTTAG TAT TTAAGGTGCG TTTTTTGTTAGTTCA mepA 853442 - 852612 - | penicillin-insensitive murein endopeptidase TERM 1383 852739 - 852725 - G 73 -5.6 -4.54404 | CAAACCAAGAATAAA GCTCCG CAC CGCAGC CGTCGCCCGCCGGAA TERM 1384 853141 - 853126 - G 71 -2.4 -5.08601 | overlap 853127 TGACCTGAAGAAAAA CGCCCG CCCG CCGGCA TCCCCATATCACCGA TERM 1385 853166 - 853181 + g 71 -6.8 -4.13748 | CACCGATTAAGATTG GCGGTA AGCC TGCCGC TTTGGTATTTTTGGC TERM 1386 853519 - 853476 - R 100 -18.5 -5.87996 | opp_overlap 853479 CAATGAATAAAAAAA CAAGCGGTCTTTTTTGC AGCATTTTTA GCAAAAAAGACCGCTTG TTCGGATTATACCCG TERM 1387 853479 - 853516 + r 100 -14.4 -3.6968 | opp_overlap 853476 TGAATAAAAAAACAA GCGGTCTTTTTTGC AGCATTTTTA GCAAAAAAGACCGC TTGTTCGGATTATAC aroC 854619 - 853537 - | chorismate synthase APL_0749 857949 - 854641 - | potassium efflux protein KefA TERM 1388 856360 - 856328 - G 73 -9.1 -3.5594 | AACGTACTTGGTAAA GCCAGTAGCAATGTC CAA AACATGGCTTCCGGC GTGTACCAATGGCTG TERM 1389 856417 - 856431 + g 70 -3.5 -4.88293 | GGCAATTTTAAACAA GCGGT CTTTT ATCGC TTTCTTTTTCCAATT TERM 1390 856491 - 856475 - G 82 -2.2 -5.66229 | overlap 856476 856486 856489 ATCAATAAGAAAAAA GCGGTA AATAA TACCGT AGGTAACAGATTCTT TERM 1391 857447 - 857464 + g 70 -5.6 -4.29396 | TTTAAGCGGGTAATT TCTTGC GTTCTG GCAAGA TTTTCATCGGTAATT TERM 1392 857605 - 857623 + g 73 -3.8 -5.02074 | overlap 857607 TAATTCATCAAGCGA GAGCGTAT CAA ATGCGCTA TTTTTTAACGAATCC APL_0750 861311 - 857967 - | potassium efflux protein KefA TERM 1393 858806 - 858790 - G 88 -9.5 -4.31837 | AATAAATTCAATAAA GTAATGG ATT CCATTAC CACGCCTTGTGCGGT TERM 1394 859730 - 859718 - G 77 -4.7 -5.02074 | opp_overlap 859718 859719, overlap 859719 TCACCGTCCAAAAAA TCGCC GCC GGCGT ATTCCATTGACTGTC TERM 1395 859729 - 859719 - G 73 -8.2 -3.60762 | opp_overlap 859718 859719, overlap 859718 CACCGTCCAAAAAAT CGCC GCC GGCG TATTCCATTGACTGT TERM 1396 859868 - 859896 + g 70 -5.4 -4.57837 | gap 1, opp_overlap 859868 859870 859892, overlap 859870 CAGCCGCCGGCACAA GATTG-TCTTTCC AATT GGAAAGATCAAAC TTTTTGGCCAAGTCT menE 862722 - 861292 - | O-succinylbenzoic acid--CoA ligase TERM 1397 861727 - 861742 + g 85 -4 -5.44119 | gap 1, opp_overlap 861727 TTCTTGGTTCACAAG CGGTCGA ATT TC-ACCG TTTTTTTGCAATGCG seqA 863300 - 862740 - | replication initiation regulator SeqA APL_0753 863424 - 864209 + | putative esterase/lipase yecO 864217 - 864942 + | S-adenosyl-L-methionine-dependent methyltransferase TERM 1398 865064 - 865082 + F 100 -9.6 -4.83243 | GATAAAATCTCGTAG GGGCGTAT CGA ATACGTCC TTTATTTTATATGAA TERM 1399 865369 - 865359 - g 74 -6.8 -4.32201 | CGAATCAATCCAAAA CTGC TTT GCAG AATTAAGCAAAAAAT fabI 865141 - 865929 + | enoyl-[acyl-carrier-protein] reductase (NADH) TERM 1400 865958 - 865977 + F 100 -10.7 -5.72622 | opp_overlap 865958 TATAAGTATGTAAAA CGGACGC AATTTA GCGTCCG TTTTTTATTTCTGCG TERM 1401 865977 - 865958 - f 100 -10.7 -4.24963 | opp_overlap 865958 TATAAGTATGTAAAA CGGACGC AATTTA GCGTCCG TTTTTTATTTCTGCG APL_0756 866377 - 866655 + | hypothetical protein TERM 1402 866713 - 866664 - f 87 -10.3 -3.73008 | gap 1, opp_overlap 866664 ATTATAAAATGATAA GCGGTTGGATTTAGTTGATTTTTT ACA AAAAATTCAGC-AAATCTAACCGC TTTCCGTTATAATCC TERM 1403 866664 - 866713 + F 100 -14.7 -3.82083 | gap 1, opp_overlap 866664 ATTATAAAATGATAA GCGGTTGGATTTAGTTGATTTTTT ACA AAAAATTCAGC-AAATCTAACCGC TTTCCGTTATAATCC TERM 1404 866743 - 866761 + F 95 -6 -5.98675 | CCTATCAAATTTCAT GGTGCA ACGATAC TGCACC TTTTTTATTTTTATA TERM 1405 867089 - 867066 - g 76 -7.6 -4.15044 | GTGCGTTTTAACAAA GACAATAAAT TACA ACTTATTGTC GATCATCCAAGCATT TERM 1406 868644 - 868626 - g 75 -2.4 -5.31275 | overlap 868629 868638 CTTCACGATAAAAAA GAAGAAAT GGA ATTCCGTC CGGAAGAAATCGCAC rnb 866787 - 868763 + | exoribonuclease II TERM 1407 868771 - 868820 + F 73 -8.9 -3.32963 | gap 1, opp_overlap 868790, overlap 868790 TTATCTAATCGGCAA GCGGTCAAATTTCGA-GAATTTTT TGC AAAATTTCCTACAAATTTGACCGC TTATCACATGAGGCT APL_0758 868838 - 869209 + | hypothetical protein APL_0759 869206 - 869892 + | hypothetical protein apaH 869917 - 870729 + | diadenosine tetraphosphatase TERM 1408 870881 - 870902 + T 100 -13.1 -5.60993 | opp_overlap 870877 870876 ACCATAAAATTCCAA TCCCTTGTC GAAA GACAAGGGA TTTTTTTATGCCAAA TERM 1409 870943 - 870982 + T 100 -13.8 -3.83724 | opp_overlap 870943 AATGCTAATAAAAAA GCCCATTTAAAATTGCTC GTCG GAACATTTTTAAATGGGC TTTCGCTTCTCTCAT TERM 1410 870982 - 870943 - T 100 -16 -5.4756 | opp_overlap 870943 AATGCTAATAAAAAA GCCCATTTAAAATTGCTC GTCG GAACATTTTTAAATGGGC TTTCGCTTCTCTCAT APL_0761 871160 - 870918 - | hypothetical protein APL_0762 871328 - 872083 + | hypothetical protein TERM 1411 872112 - 872092 - f 93 -6.9 -5.43514 | opp_overlap 872092 AAAATAAGTAAAAAA TCCTTCTTT GGC ATAGAAGGA TTTTTCAGCAATATA TERM 1412 872092 - 872112 + F 80 -6.9 -4.59109 | opp_overlap 872092 AAAATAAGTAAAAAA TCCTTCTTT GGC ATAGAAGGA TTTTTCAGCAATATA perM 872142 - 873203 + | putative permease perM-like protein APL_0764 873233 - 874162 + | hypothetical protein TERM 1413 874163 - 874189 + F 89 -8.6 -4.60255 | opp_overlap 874163 874167, overlap 874167 GCATTGTTACATTAA CCTACTGCCCCG TTT TGGGGCAGTTGA TTTTTAGAGGATTAT TERM 1414 874189 - 874163 - f 79 -10.1 -3.26471 | opp_overlap 874163 874167, overlap 874167 GCATTGTTACATTAA CCTACTGCCCC GTTTT GGGGCAGTTGA TTTTTAGAGGATTAT TERM 1415 874185 - 874167 - f 82 -11.7 -2.58714 | opp_overlap 874163 874167, overlap 874163 TGTTACATTAACCTA CTGCCCC GTTTT GGGGCAG TTGATTTTTAGAGGA TERM 1416 874167 - 874185 + F 95 -12.4 -3.80855 | opp_overlap 874167 874163, overlap 874163 TGTTACATTAACCTA CTGCCCCG TTT TGGGGCAG TTGATTTTTAGAGGA TERM 1417 874598 - 874573 - g 71 -8.4 -3.55622 | gap 1, opp_overlap 874573 874572 GGTAACGGTTTTAAA GCGATCATGAC TGCTC GTCATGA-CGC CTTGTTCGAATTACA queA 874210 - 875295 + | S-adenosylmethionine:tRNA ribosyltransferase-isomerase TERM 1418 875304 - 875324 + T 100 -14.1 -5.82281 | CCCATAATCTCAATC GCCACGTTT TAC AAACGTGGC TTTTTTTATCTATTT rec2 877624 - 875330 - | recombination protein 2 TERM 1419 875899 - 875883 - G 74 -7.9 -3.91798 | opp_overlap 875879 TAAGCGTTAAGTAAA TCCGCCG CTC CGCCGGA ATGATCATTATCGTC APL_0767 878938 - 877724 - | serine/threonine transporter SstT TERM 1420 878989 - 878966 - H 100 -14 -5.27779 | TGTAAGACTAAAAAA GGATATACGG CAAA CCGTATATCC GCCAAAATATGAAGT dgkA 879187 - 879549 + | diacylglycerol kinase TERM 1421 879599 - 879557 - f 77 -10.1 -3.00298 | opp_overlap 879557, overlap 879559 TTTTTTAAGGAGATA TAGGTGATAGATAATCAGT GTAAA ACGGATTATTTACCACCTA TTTTTATATCAATCA TERM 1422 879557 - 879599 + F 100 -10.1 -4.99035 | opp_overlap 879557 879559 TTTTTTAAGGAGATA TAGGTGATAGATAATCAGT GTAAA ACGGATTATTTACCACCTA TTTTTATATCAATCA TERM 1423 880372 - 880387 + G 71 -6.8 -4.11216 | TTATCGGCGGGCATA CGCACG ATAC CGTGTG TTTTGACGATAAAGG TERM 1424 881220 - 881205 - g 71 -3.4 -5.07107 | GAAATGTTGAAAAAA TATTTT GAAG AAAATA AAGTCATCGACGCAA ushA 879630 - 881273 + | bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor TERM 1425 881310 - 881292 - f 100 -11.8 -5.55698 | opp_overlap 881292 CACAAGTCAAAAAAA GCTAAGCA ATA TGCTTAGC TTTTTTATTAGCTCA TERM 1426 881292 - 881310 + F 100 -11.8 -5.4833 | opp_overlap 881292 CACAAGTCAAAAAAA GCTAAGCA ATA TGCTTAGC TTTTTTATTAGCTCA TERM 1427 881405 - 881369 - f 100 -11.7 -4.56775 | opp_overlap 881369 881371, overlap 881370 881371 ATTTGTTGCTAAAAA GTGGCTTAAAGCCTTAT AGT ACAAGGCTTTAAGCCTT CTTTTTGAAATATGA TERM 1428 881369 - 881406 + F 93 -9.3 -4.64766 | gap 1, opp_overlap 881369 881370 881371, overlap 881371 ATTTGTTGCTAAAAA G-TGGCTTAAAGCCTTAT AGT ACAAGGCTTTAAGCCTTC TTTTTGAAATATGAA TERM 1429 881404 - 881370 - f 100 -15.2 -3.33744 | opp_overlap 881369 881371, overlap 881369 881371 TTTGTTGCTAAAAAG TGGCTTAAAGCCTTAT AGT ACAAGGCTTTAAGCCT TCTTTTTGAAATATG TERM 1430 881403 - 881371 - f 100 -18.7 -2.60032 | opp_overlap 881369 881371, overlap 881370 881369 TTGTTGCTAAAAAGT GGCTTAAAGCCTTAT AGT ACAAGGCTTTAAGCC TTCTTTTTGAAATAT TERM 1431 881371 - 881403 + F 100 -16.5 -4.43351 | opp_overlap 881371 881370 881369, overlap 881369 TTGTTGCTAAAAAGT GGCTTAAAGCCTTAT AGT ACAAGGCTTTAAGCC TTCTTTTTGAAATAT APL_0770 881728 - 882330 + | hypothetical protein TERM 1432 883261 - 883280 + T 80 -5 -5.24796 | AGCTGTTTTTCCGAA TCCCAC GTTTACTA GTGGGA TTTTTATTATATACA TERM 1433 883654 - 883670 + T 81 -10.9 -2.62616 | opp_overlap 883633 TCGAACTCGCGACCC CGACCTT GGC AAGGTCG TGCTCTACCAACTGA TERM 1434 883927 - 883890 - T 100 -11.5 -4.90471 | opp_overlap 883890 ATTTAAAATAGAAAA GCGGTCGAAATTTGC TGTTTTTT ACAAATTTCAACCGC TTGCATAAATAAGTT TERM 1435 883890 - 883927 + T 71 -8.6 -3.08312 | opp_overlap 883890 ATTTAAAATAGAAAA GCGGTCGAAATTTG CTGTTTTTTA CAAATTTCAACCGC TTGCATAAATAAGTT lpdA 885378 - 883954 - | dihydrolipoamide dehydrogenase TERM 1436 884671 - 884688 + g 81 -4.2 -5.33866 | CGCAGTTACTTTAGT TTCAAG CATTAA CTTGAA TTTTTTCTCGATTTG TERM 1437 885469 - 885426 - R 86 -12.7 -2.78384 | opp_overlap 885429, overlap 885429 885463 GCGCCCCCTACGATA CAAGCGGTCGATTTTACAA CATTTT TTGTAAATTCAACCGCTTA CCTATTACATAACTA TERM 1438 885466 - 885429 - R 91 -12.2 -3.54475 | opp_overlap 885429, overlap 885426 885463 CCCCCTACGATACAA GCGGTCGATTTTACAA CATTTT TTGTAAATTCAACCGC TTACCTATTACATAA TERM 1439 885429 - 885466 + r 79 -10 -3.19522 | opp_overlap 885426 885429 885463 CCCCCTACGATACAA GCGGTCGATTTTACAA CATTTT TTGTAAATTCAACCGC TTACCTATTACATAA aceF 887372 - 885474 - | dihydrolipoamide acetyltransferase TERM 1440 887395 - 887426 + r 86 -8 -4.79955 | opp_overlap 887397 887400, overlap 887397 887400 ATCCTTCATTTGATA AATTATTCTCCCCC ATAA GGGGGAGAATGCTA TTTTCTTATGCGTAT TERM 1441 887424 - 887397 - R 75 -8.4 -3.89346 | opp_overlap 887395 887397 887400, overlap 887400 CCTTCATTTGATAAA TTATTCTCCCCC ATAA GGGGGAGAATGC TATTTTCTTATGCGT TERM 1442 887397 - 887424 + r 93 -10.6 -4.01115 | opp_overlap 887397 887400, overlap 887395 887400 CCTTCATTTGATAAA TTATTCTCCCCC ATAA GGGGGAGAATGC TATTTTCTTATGCGT TERM 1443 887421 - 887400 - R 95 -14.5 -3.01918 | opp_overlap 887400 887397 887395, overlap 887397 TCATTTGATAAATTA TTCTCCCCC ATAA GGGGGAGAA TGCTATTTTCTTATG TERM 1444 887400 - 887421 + r 95 -14.5 -3.0404 | opp_overlap 887397 887400, overlap 887397 887395 TCATTTGATAAATTA TTCTCCCCC ATAA GGGGGAGAA TGCTATTTTCTTATG aceE 890086 - 887432 - | pyruvate dehydrogenase subunit E1 TERM 1445 889660 - 889694 + g 87 -5.1 -5.47218 | opp_overlap 889653 CATACATACCCGGCG CGGC-GTGACCTTGGAA AAA TACTAAG-TCACCGCCG TTTTTTTCAGTCGCC TERM 1446 890433 - 890416 - R 75 -4.9 -4.85599 | opp_overlap 890416 TTCATTTCACAAAAA CGATTAA ATAT TTAACCG CTTACTATTAACGCA pyrD 891448 - 890441 - | dihydroorotate dehydrogenase 2 TERM 1447 890668 - 890684 + g 77 -3.5 -5.14965 | opp_overlap 890651 890668, overlap 890650 GTTTACCGCTTAAAC CGCCTTG TTG CTCGGCG TTTTTTAATCCGACT TERM 1448 891483 - 891519 + r 70 -8 -3.24924 | opp_overlap 891487 891488 891491, overlap 891481 891491 TTAGAAAGAAACGGA TAAATTAAGGGCGGGT ATCAA ACCCGCCCTTACTGGA TATTATGCATCGAAC TERM 1449 891515 - 891487 - R 100 -13.2 -4.0683 | opp_overlap 891483 891481 891491, overlap 891488 891491 AAAGAAACGGATAAA TTAAGGGCGGGT ATCAA ACCCGCCCTTAC TGGATATTATGCATC TERM 1450 891514 - 891488 - R 100 -16.7 -3.02471 | opp_overlap 891483 891481 891491, overlap 891487 891491 AAGAAACGGATAAAT TAAGGGCGGGT ATCAA ACCCGCCCTTA CTGGATATTATGCAT TERM 1451 891511 - 891491 - R 100 -14 -3.63662 | opp_overlap 891483 891481 891491, overlap 891488 891487 AAACGGATAAATTAA GGGCGGGT ATCAA ACCCGCCC TTACTGGATATTATG TERM 1452 891491 - 891511 + r 95 -14 -3.22894 | opp_overlap 891491 891488 891487, overlap 891483 891481 AAACGGATAAATTAA GGGCGGGT ATCAA ACCCGCCC TTACTGGATATTATG prsA 892472 - 891522 - | ribose-phosphate pyrophosphokinase TERM 1453 891745 - 891755 + g 79 -8.2 -4.19577 | opp_overlap 891738 891733 891740 TAAGCGAATACGCGA CGCG CAC CGCG TTCTTTTAACGCTTC ispE 893341 - 892484 - | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase lolB 893983 - 893351 - | outer membrane lipoprotein LolB TERM 1454 894085 - 894069 - R 100 -9.4 -5.27335 | GTCTTCAAAGAAAAA GGCACC TTATC GGTGCC TGCAATAAAATAGCC msbA 895860 - 894112 - | lipid transporter ATP-binding/permease protein TERM 1455 895342 - 895324 - G 79 -11 -3.16039 | overlap 895311 AACGATGCCGATTAA GACACCGA TAA TCGGTGCC ATCACAAATAAAACA APL_0779 896651 - 895965 - | hypothetical protein TERM 1456 896215 - 896242 + g 73 -8.4 -3.65351 | opp_overlap 896210 896208, overlap 896209 896216 GCAACTAATACGCCT ACGGCGGTAATT GCCG AACTACCGCCGA TTTGAGTGGCGATAG TERM 1457 896216 - 896241 + g 83 -11.9 -2.78996 | opp_overlap 896210 896208, overlap 896209 896215 CAACTAATACGCCTA CGGCGGTAATT GCCG AACTACCGCCG ATTTGAGTGGCGATA APL_0780 897020 - 896661 - | hypothetical protein TERM 1458 897038 - 897081 + r 82 -7.6 -4.51847 | opp_overlap 897041, overlap 897032 AAGTATCCTCCGTAA TAAGCGGTTAAATTTACAAA AAAT TTTGCAAAATCAACCGCTTG TTTTCTCACTTATTT TERM 1459 897078 - 897041 - R 90 -11.5 -3.61715 | opp_overlap 897032 897038 TATCCTCCGTAATAA GCGGTTAAATTTACAAA AAAT TTTGCAAAATCAACCGC TTGTTTTCTCACTTA APL_0781 899009 - 897087 - | putative ATP-dependent helicase TERM 1460 897623 - 897588 - G 71 -4 -4.85129 | overlap 897592 897595 AGTACAGAGCAAAAA GCAACGACCGTTATTG GCTT CAATAACGGGCATCAA CATTTTGCCTAGTTC TERM 1461 897619 - 897592 - G 81 -9.2 -3.86508 | overlap 897588 897595 CAGAGCAAAAAGCAA CGACCGTTATTG GCTT CAATAACGGGCA TCAACATTTTGCCTA TERM 1462 897616 - 897595 - G 83 -11.7 -2.98982 | overlap 897592 897588 AGCAAAAAGCAACGA CCGTTATTG GCTT CAATAACGG GCATCAACATTTTGC TERM 1463 899470 - 899415 - R 100 -17.2 -4.77036 | opp_overlap 899418 899428 899469, overlap 899418 GTCTATTATTAAAAA CTAGCGGTCTGATTTTCTAAGAAATT TGCA AATTTCCTGCAAAATCAGACCGCTTG TTAAACACCGTTTGG TERM 1464 899467 - 899418 - R 100 -17.5 -3.29543 | opp_overlap 899418 899428, overlap 899415 TATTATTAAAAACTA GCGGTCTGATTTTCTAAGAAATT TGCA AATTTCCTGCAAAATCAGACCGC TTGTTAAACACCGTT TERM 1465 899418 - 899467 + r 100 -17.5 -3.61894 | opp_overlap 899415 899418, overlap 899428 TATTATTAAAAACTA GCGGTCTGATTTTCTAAGAAATT TGCA AATTTCCTGCAAAATCAGACCGC TTGTTAAACACCGTT uvrA 902317 - 899489 - | UvrABC system protein A TERM 1466 900238 - 900249 + g 70 -7.2 -3.78022 | TTGAACGTGGTGTAC GCCC AATC GGGC TTTGGTCGATATCAA TERM 1467 902227 - 902205 - G 91 -10.6 -4.08307 | opp_overlap 902217 TCAAAAGCTAAAGAA GACTTACCCG ATC CGGATAAGCC GGTAATTACAATAAA ssb 902468 - 902992 + | single-strand DNA-binding protein TERM 1468 903028 - 903058 + T 100 -14.3 -3.75332 | opp_overlap 903035, overlap 903035 TCGAATATTTACAAA TAAAAAACGGAAG CCTTA CTTCCGTTTTTTA TTTAGGTTAAAGAAT TERM 1469 903051 - 903035 - T 95 -8.7 -5.72622 | opp_overlap 903028 903035 TTTACAAATAAAAAA CGGAAGC CTT ACTTCCG TTTTTTATTTAGGTT TERM 1470 903035 - 903051 + T 93 -8 -5.67283 | opp_overlap 903035, overlap 903028 TTTACAAATAAAAAA CGGAAG CCTTA CTTCCG TTTTTTATTTAGGTT APL_0784 903979 - 903161 - | hypothetical protein TERM 1471 903616 - 903645 + g 72 -6.5 -4.37092 | opp_overlap 903625 TAAAAGACGTATTAC CCGAAGTAACATT ATCT AATGTTAAATCGG TTTTCTGAAAAGACT TERM 1472 904228 - 904204 - R 73 -8.5 -3.2756 | opp_overlap 904204 904205, overlap 904202 904200 904205 AATTGTAAGAAGAGA TGCCGTCTGGA AGT TTCAGACGGCG TTTATTAGAGCTAAA TERM 1473 904204 - 904228 + r 100 -12.9 -4.16842 | opp_overlap 904204 904202 904200 904205, overlap 904205 AATTGTAAGAAGAGA TGCCGTCTGGA AGT TTCAGACGGCG TTTATTAGAGCTAAA TERM 1474 904227 - 904205 - R 84 -12 -2.55813 | opp_overlap 904204 904205, overlap 904204 904202 904200 ATTGTAAGAAGAGAT GCCGTCTGGA AGT TTCAGACGGC GTTTATTAGAGCTAA TERM 1475 904205 - 904227 + r 93 -14.2 -3.09784 | opp_overlap 904205 904204 904202 904200, overlap 904204 ATTGTAAGAAGAGAT GCCGTCTGGA AGT TTCAGACGGC GTTTATTAGAGCTAA APL_0785 906294 - 904303 - | hypothetical protein TERM 1476 905840 - 905861 + g 80 -10.1 -3.60899 | opp_overlap 905840, overlap 905836 ATGAATGACATAAAA CTCCGAACC GATG GGGTCGGAG TTGCTTTACCTTTTA TERM 1477 905861 - 905840 - G 100 -10.1 -4.62002 | opp_overlap 905840 905836 ATGAATGACATAAAA CTCCGAACC GATG GGGTCGGAG TTGCTTTACCTTTTA APL_0786 907804 - 906716 - | hypothetical protein APL_0787 909199 - 907871 - | putative ATPase TERM 1478 909304 - 909279 - R 74 -6.3 -4.41895 | opp_overlap 909281, overlap 909281 909301 AACTTGCAACTAAAA CACATTTTTTC CAAT GAAAAAATGTT AATAACACACACTTT TERM 1479 909281 - 909302 + r 71 -8.9 -3.14211 | opp_overlap 909279 909281 909301 CTTGCAACTAAAACA CATTTTTTC CAAT GAAAAAATG TTAATAACACACACT TERM 1480 909302 - 909281 - R 79 -8.9 -3.8125 | opp_overlap 909281, overlap 909279 909301 CTTGCAACTAAAACA CATTTTTTC CAAT GAAAAAATG TTAATAACACACACT TERM 1481 909311 - 909301 - R 76 -4 -5.26875 | opp_overlap 909281, overlap 909281 909279 TTTCCAATGAAAAAA TGTT AAT AACA CACACTTTTTCAAAG TERM 1482 909440 - 909424 - R 76 -6.6 -4.5032 | opp_overlap 909424 909423, overlap 909417 CATATTAAGAAGAAA GGAGAA GATCT TTCTCC CTCTTCCTATGGATT APL_0788 910399 - 909512 - | transcriptional regulatory protein APL_0789 910504 - 911478 + | dioxygenase TERM 1483 913411 - 913394 - T 83 -9.9 -3.88583 | opp_overlap 913394 TAAACTCGTGAGAAA CCTAGCA GAAA TGCTAGG TTTTTTTACATATTA TERM 1484 913394 - 913411 + T 100 -9.9 -5.52909 | opp_overlap 913394 TAAACTCGTGAGAAA CCTAGCA GAAA TGCTAGG TTTTTTTACATATTA APL_0792 914191 - 913424 - | hypothetical protein TERM 1485 913505 - 913525 + g 82 -4.7 -5.27923 | AACGCCAAATGCTCG GAGTTTCTC TCG GGGAAGTTC TTTTTTATCAAATTC TERM 1486 913686 - 913698 + g 74 -6.3 -4.41348 | overlap 913696 ACCAGATCGCCTACC GCAAT ATT ATTGC TTTGTTTCCAAAGAA sapD 915311 - 914274 - | peptide transport system ATP-binding protein SapD sapC 916212 - 915325 - | peptide transport system permease protein SapC sapB 917164 - 916202 - | peptide transport system permease protein SapB sapA 918861 - 917164 - | peptide transport periplasmic protein SapA precursor TERM 1487 918152 - 918135 - G 72 -7.7 -3.89346 | overlap 918137 TGCTCAGTTGATAAA CACCGGT TCCG ACCGGTA ATAAATCTAGTTGTG tyrR 920019 - 918871 - | transcriptional regulatory protein TyrR gmhA 920224 - 920808 + | phosphoheptose isomerase TERM 1488 920850 - 920877 + F 85 -4.2 -5.67711 | gap 1, opp_overlap 920850 AAATCTATTGCTAAA GGACTGAAGTC AGAAATC GGC-TCAGTCC TTTTTATTTTCTTTG TERM 1489 920935 - 920973 + F 100 -12.6 -4.64766 | opp_overlap 920936, overlap 920936 AAAAGGTTGGTAAAA AGTGGGTTAAAGCCTTAT AGT ACAAGGCTTTAACCTACC TTTTTGAAATATGAA TERM 1490 920972 - 920936 - f 100 -16.1 -4.58685 | opp_overlap 920935 920936 AAAGGTTGGTAAAAA GTGGGTTAAAGCCTTAT AGT ACAAGGCTTTAACCTAC CTTTTTGAAATATGA TERM 1491 920936 - 920972 + F 100 -16.1 -3.38378 | opp_overlap 920936, overlap 920935 AAAGGTTGGTAAAAA GTGGGTTAAAGCCTTAT AGT ACAAGGCTTTAACCTAC CTTTTTGAAATATGA APL_0799 921300 - 921911 + | hypothetical protein TERM 1492 922028 - 922064 + T 95 -12.6 -3.81 | gap 1, opp_overlap 922028, overlap 922060 TTAATTATAAAAAAA TCTGCACCTAAATGGAT ATGA ATCTATT-AGGTGCAGA TTATTATCGGCTAAT TERM 1493 922064 - 922028 - T 100 -10.4 -5.71983 | gap 1, opp_overlap 922028 922060 TTAATTATAAAAAAA TCTGCACCTAAATGGAT ATGA ATCTAT-TAGGTGCAGA TTATTATCGGCTAAT pckA 923731 - 922121 - | phosphoenolpyruvate carboxykinase ftsB 924004 - 924282 + | cell division protein FtsB-like protein TERM 1494 924399 - 924418 + G 82 -5 -5.41143 | opp_overlap 924390 924399 ACAAAATAAAACGAT TTTAGAGC ATAC GCTCGAAA TTTTTTTAGCACATC ispD 924298 - 924984 + | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase TERM 1495 925206 - 925193 - g 71 -2.3 -5.10767 | TATGCAATACAAAAA TGCGG ATAG CCGTA AATTACTGATTGAAG ispF 924981 - 925457 + | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase TERM 1496 925502 - 925470 - T 89 -13.7 -2.82289 | opp_overlap 925476, overlap 925476 TAAAATAGCGGAAAT TAAAAAGGCTAAACA TCA TGTTTAGCCTTTTGA TAAGCATAATGAATA TERM 1497 925476 - 925496 + T 100 -12.7 -4.26076 | opp_overlap 925470 925476 AGCGGAAATTAAAAA GGCTAAACA TCA TGTTTAGCC TTTTGATAAGCATAA TERM 1498 925496 - 925476 - T 100 -12.7 -4.99134 | opp_overlap 925476, overlap 925470 AGCGGAAATTAAAAA GGCTAAACA TCA TGTTTAGCC TTTTGATAAGCATAA TERM 1499 926094 - 926038 - T 84 -6.8 -5.10933 | opp_overlap 926038 TCACGCAAAATAAAA GCGGTTAAATTCCAGTTAAAATTTAC GACTT GCAAATTTATTGTGAAATTTAACCGC TTGTTACGACTTTTT APL_0804 928102 - 926126 - | hypothetical protein TERM 1500 928053 - 928034 - G 80 -2.8 -5.46657 | opp_overlap 928039 928041, overlap 928017 928036 928039 GATCCCAACAAAAAA CAGTATTG GGAA CAACACAG AACGGCGTTGTTCCA TERM 1501 928120 - 928097 - G 100 -9.6 -4.74598 | gap 1 TAAATTTAAAATAAA GCGCATACCGA TAA TCGGC-TGCGC GAATAATATAGAATG APL_0805 928928 - 928140 - | hypothetical protein TERM 1502 929277 - 929267 - g 80 -4.6 -5.10461 | CTTACTCAATAAAAA CGAC CAA GCCG AACTTTCCGATTACG xseB 929073 - 929297 + | exodeoxyribonuclease VII small subunit TERM 1503 930015 - 930003 - g 70 -7.7 -3.5774 | opp_overlap 930013, overlap 930012 930013 ATGTAATTGGCGAAA CCGAT AAA ATCGG TAAAACCGTAGGTTC TERM 1504 930154 - 930174 + G 75 -5.4 -4.77165 | GCCGTTTGATACCAC TGCGCTTA AAGAA TTAGCGCA TTTTATTGTCAAACG ispA 929306 - 930199 + | geranyltranstransferase TERM 1505 930265 - 930247 - T 100 -11 -4.17516 | opp_overlap 930247 CTTAAAGCATATAAA GGCGAGAA TGA CTCTCGCC TTTTTGTTTATTTAC TERM 1506 930247 - 930265 + T 100 -10.3 -5.5454 | opp_overlap 930247 CTTAAAGCATATAAA GGCGAGA ATGAC TCTCGCC TTTTTGTTTATTTAC APL_0808 930627 - 930283 - | hypothetical protein TERM 1507 930706 - 930689 - R 100 -9.9 -5.30189 | opp_overlap 930689 TATAAGATCAAAAAA GCACACT CGAA AGTGTGC TTTTTTCCGTATCAA TERM 1508 930689 - 930706 + r 100 -9.9 -5.1287 | opp_overlap 930689 TATAAGATCAAAAAA GCACACT CGAA AGTGTGC TTTTTTCCGTATCAA lysS 932230 - 930728 - | lysyl-tRNA synthetase TERM 1509 932361 - 932304 - R 95 -14.6 -3.14344 | gap 2, opp_overlap 932318, overlap 932308 GATTTTGGGTAGGAA GCAAGCGGTCGGATTTTCGCAAAAAGTT GCAA AACTTTC-GT-AAAATCCGACCGCTTAC CCATTACATCACGAC TERM 1510 932357 - 932308 - R 90 -11.8 -3.39895 | gap 2, opp_overlap 932318, overlap 932304 TTGGGTAGGAAGCAA GCGGTCGGATTTTCGCAAAAAGTT GCAA AACTTTC-GT-AAAATCCGACCGC TTACCCATTACATCA cafA 933840 - 932365 - | ribonuclease G TERM 1511 934222 - 934236 + G 71 -10 -2.71918 | overlap 934221 934219 GGTGCATATTCGTGA TGCGGA TTG TCCGCA ATGTTTCTCGAATGG APL_0811 934070 - 935833 + | hypothetical protein TERM 1512 935863 - 935844 - T 80 -9.2 -3.55622 | opp_overlap 935845, overlap 935845 GTTAAGCTTTTCAAA TGGTGGGC GAAA GCCCACCT TATTATCTACTATAT TERM 1513 935862 - 935845 - T 86 -12.7 -2.73159 | opp_overlap 935845, overlap 935844 TTAAGCTTTTCAAAT GGTGGGC GAAA GCCCACC TTATTATCTACTATA TERM 1514 935845 - 935862 + T 100 -12.7 -3.92001 | opp_overlap 935845 935844 TTAAGCTTTTCAAAT GGTGGGC GAAA GCCCACC TTATTATCTACTATA res 938478 - 935866 - | type III restriction enzyme TERM 1515 936690 - 936704 + g 78 -5.7 -4.84539 | opp_overlap 936689 CAGCTTGTGCAAACG CCACT CGATA AGTGG TTTTATATTTGATTC TERM 1516 936771 - 936789 + g 71 -3.1 -5.00388 | opp_overlap 936771, overlap 936767 AATCTTTCCGATAAC GCACAAC CTTAC GTTCTGC TTTATTTTTGATTTG TERM 1517 938590 - 938610 + r 100 -14.1 -4.56914 | CCAAATCTCCCCTTC CCCCTCTTT GCT AAAGAGGGG TTTTAATTTAAATCA TERM 1518 938645 - 938633 - R 82 -4.1 -5.42265 | TTAAATCACAAAAAA TGCAA TAT TCGCA TCTTTCATCTGCAAT mod 940465 - 938618 - | type III restriction-modification system methyltransferase TERM 1519 940542 - 940563 + H 73 -9.5 -2.87622 | overlap 940541 TAGGCATTATGATGT CCCTTTGAA AAAA TTCAAGGGG CTTATTCTACAAATC APL_0814 940675 - 941637 + | hypothetical protein TERM 1520 941659 - 941676 + F 75 -7 -4.21471 | opp_overlap 941659 TACCTATCTGCTAAA GCCTCA CATTGC TGAGGC TTATTCTTTTGAACT APL_0815 941783 - 942118 + | hypothetical protein TERM 1521 942170 - 942126 - T 95 -14.5 -3.24245 | opp_overlap 942129, overlap 942129 942139 GTATCTAGAAGCTAA CAAGCGGTCAAAATTTGCAAA TCT TTTGCAAAAATCAACCGCTTG TGTACGATGAGTAAT TERM 1522 942167 - 942129 - T 87 -10.4 -3.75766 | opp_overlap 942129, overlap 942126 942139 TCTAGAAGCTAACAA GCGGTCAAAATTTGCAAA TCT TTTGCAAAAATCAACCGC TTGTGTACGATGAGT TERM 1523 942157 - 942139 - T 85 -9 -4.12599 | opp_overlap 942129, overlap 942129 942126 AACAAGCGGTCAAAA TTTGCAAA TCT TTTGCAAA AATCAACCGCTTGTG mltA 943282 - 942185 - | murein transglycosylase A TERM 1524 943259 - 943234 - G 100 -9.7 -4.41895 | gap 1, opp_overlap 943232 943234 AACTTGCAACTAAAA GTGCGACGGCAG TCA CCGCCGCC-CAC TGTTTATACGCCTTC TERM 1525 943573 - 943593 + H 100 -15.5 -5.56264 | opp_overlap 943569 943568 CAACCAAAATTCCTA GCCCTCGAT AAT ATCGAGGGC TTTTTTGTATTTGCA xseA 943691 - 945151 + | exodeoxyribonuclease VII large subunit TERM 1526 945229 - 945269 + T 100 -15 -4.4078 | opp_overlap 945237, overlap 945230 TTATACTCTATATTG TTCACGAAGTTATCCACA ATTAA TGTGAATAACTTCGTGAG TTTTGATTGCAAAAG TERM 1527 945230 - 945268 + T 100 -16.3 -3.24146 | opp_overlap 945237, overlap 945229 TATACTCTATATTGT TCACGAAGTTATCCACA ATTAA TGTGAATAACTTCGTGA GTTTTGATTGCAAAA TERM 1528 945261 - 945237 - T 70 -8 -3.15249 | opp_overlap 945230 945229 TATATTGTTCACGAA GTTATCCACA ATTAA TGTGAATAAC TTCGTGAGTTTTGAT TERM 1529 945426 - 945446 + T 77 -9.7 -3.06501 | CGAAATCGGTAGACG CAGCGGATT CAA AATCCGCCG TTGAATAAACGTGTC APL_0818 945940 - 945527 - | transthyretin-like periplasmic protein TERM 1530 946464 - 946449 - g 84 -6.2 -5.03715 | opp_overlap 946447 946449 ACGAGCCGGAAAAAA TCCAAA ACCA TTTGGA TATGTTAATTAAAAA purR 946139 - 947149 + | DNA-binding transcriptional repressor PurR APL_0820 947172 - 947774 + | putative membrane-associated protein TERM 1531 947787 - 947806 + T 87 -6.4 -5.47218 | opp_overlap 947787 947801 TAATTTGATGAAAAA GACCACTT ACAC AAGCGGTC TTTTTTTACATAAAA TERM 1532 947806 - 947787 - T 93 -8.6 -4.74801 | opp_overlap 947787, overlap 947801 TAATTTGATGAAAAA GACCACTT ACAC AAGCGGTC TTTTTTTACATAAAA TERM 1533 947868 - 947823 - T 91 -12.9 -3.31232 | gap 1, opp_overlap 947834, overlap 947801 947834 TTTTTTACATAAAAT GCCAAA-ACAAACCCCAAAGCA AAA TACTTTGGGGTTTTTATTTAGC TTAGATTAAATATCT TERM 1534 947834 - 947856 + T 100 -10.6 -5.33026 | opp_overlap 947801 947823 947834 AAATGCCAAAACAAA CCCCAAAGCA AAA TACTTTGGGG TTTTTATTTAGCTTA TERM 1535 947856 - 947834 - T 100 -12.8 -4.69559 | opp_overlap 947834, overlap 947801 947823 AAATGCCAAAACAAA CCCCAAAGCA AAA TACTTTGGGG TTTTTATTTAGCTTA gyrB 950306 - 947874 - | DNA gyrase subunit B TERM 1536 950504 - 950464 - R 82 -3.4 -5.68438 | gap 1 TTAGGAAATAAAAAA GCGGCT-AACTTTCTTGGA AAAA TCTCAGAAAATTCAACCGC TTACTCTTTTTGCAT ubiA 951400 - 950519 - | 4-hydroxybenzoate octaprenyltransferase glpR 952161 - 951400 - | glycerol-3-phosphate regulon repressor TERM 1537 952213 - 952194 - R 100 -12.2 -5.41746 | opp_overlap 952194 AAGTTTTCAAAAAAA TGACCGCT TACC AGCGGTCA TTTTTAACTTAAATT TERM 1538 952194 - 952213 + r 100 -12.2 -4.75776 | opp_overlap 952194 AAGTTTTCAAAAAAA TGACCGCT TACC AGCGGTCA TTTTTAACTTAAATT purB 953596 - 952229 - | adenylosuccinate lyase TERM 1539 953627 - 953651 + r 95 -13 -3.77014 | opp_overlap 953618 953630, overlap 953619 953630 AATAAATGTTCGGAA CAAGTTCTCC ATTAC GGAGAACTTG TTTAAATACTTTTGT TERM 1540 953648 - 953630 - R 82 -9.6 -3.6279 | opp_overlap 953627 953619 953630 AAATGTTCGGAACAA GTTCTCCA TTA CGGAGAAC TTGTTTAAATACTTT TERM 1541 953630 - 953648 + r 82 -8.9 -3.99347 | opp_overlap 953630, overlap 953627 953619 AAATGTTCGGAACAA GTTCTCC ATTAC GGAGAAC TTGTTTAAATACTTT APL_0825 954285 - 953653 - | hypothetical protein TERM 1542 954334 - 954324 - R 70 -4 -4.98103 | opp_overlap 954324, overlap 954331 TAAGAAAAGATAAAA TCAA AAA TTGA TTGTCAATATAACAC TERM 1543 954341 - 954331 - R 73 -4 -5.15526 | opp_overlap 954324, overlap 954324 AGATAAAATCAAAAA TTGA TTG TCAA TATAACACTTTTTTG TERM 1544 954407 - 954432 + r 78 -7.5 -4.11371 | opp_overlap 954408, overlap 954408 954410 TGAAAAGAATAGAAA AGACGCCAACG TAAC CGTTTGCGTCC TTTTAAAGCGTATTG TERM 1545 954408 - 954431 + r 83 -11 -3.06341 | opp_overlap 954408, overlap 954407 954410 GAAAAGAATAGAAAA GACGCCAACG TAAC CGTTTGCGTC CTTTTAAAGCGTATT TERM 1546 954431 - 954408 - R 100 -11 -4.88288 | opp_overlap 954408 954407 954410 GAAAAGAATAGAAAA GACGCCAACG TAAC CGTTTGCGTC CTTTTAAAGCGTATT cydC 956117 - 954450 - | cysteine/glutathione ABC transporter membrane/ATP-binding component TERM 1547 955233 - 955219 - G 77 -3.5 -5.22039 | CCTAAATGTAAAAAA GCCAA GCCAA TCGGC ATTAAAATTTCCGCC cydD 957870 - 956128 - | cysteine/glutathione ABC transporter membrane/ATP-binding component TERM 1548 958010 - 957967 - R 100 -12.6 -5.08824 | opp_overlap 957970, overlap 957970 GGTTGATCGAAAAAA TAAGCGGTCCGTTTTGCCAA AAAA TTCACAAAACGAACCGCTTG CTCAAAATAGTTGAT TERM 1549 957970 - 958007 + r 79 -9.9 -3.16039 | opp_overlap 957967 957970 TGATCGAAAAAATAA GCGGTCCGTTTTGCCAA AAAA TTCACAAAACGAACCGC TTGCTCAAAATAGTT TERM 1550 958007 - 957970 - R 100 -14.3 -4.64763 | opp_overlap 957970, overlap 957967 TGATCGAAAAAATAA GCGGTCCGTTTTGCCAA AAAA TTCACAAAACGAACCGC TTGCTCAAAATAGTT APL_0828 961989 - 958030 - | hypothetical protein TERM 1551 960495 - 960464 - G 73 -8.6 -3.59979 | opp_overlap 960465, overlap 960465 CCTTTCGACTGTAAA CCGCCGGAAAGTAC CGCC GTCCATTCCGGCGC AAGCGATTTGGTATT TERM 1552 960494 - 960465 - G 83 -12.1 -2.75844 | opp_overlap 960465, overlap 960464 CTTTCGACTGTAAAC CGCCGGAAAGTAC CGCC GTCCATTCCGGCG CAAGCGATTTGGTAT TERM 1553 960809 - 960798 - G 75 -7.2 -4.37211 | opp_overlap 960798, overlap 960787 TAAACGGATAAGAAA CCGC ATCA GCGG TTAAATGCAGATTAA TERM 1554 962038 - 962021 - R 100 -9.9 -4.62441 | opp_overlap 962021, overlap 962031 CCTGATACAAAGAAA GCGGATA AATT TATCCGC TTGAATAATATTTAT TERM 1555 962021 - 962038 + r 79 -9.9 -3.15292 | opp_overlap 962021 962031 CCTGATACAAAGAAA GCGGATA AATT TATCCGC TTGAATAATATTTAT APL_0829 963876 - 962050 - | hypothetical protein TERM 1556 962192 - 962202 + g 70 -5.4 -4.41348 | CCGGCGTGTAAATCT TTCG TTT CGAA TTTATTTGAAGCCAG TERM 1557 962906 - 962925 + g 75 -3.4 -5.09426 | GATTCAATATTATGA CCGCGGCT ATTC AGCCAAGG TTTTTTCCAGTTCAA APL_0830 964740 - 963892 - | hypothetical protein TERM 1558 964300 - 964284 - G 71 -2.3 -5.09762 | TGTCAAGAAAGAAAA GTTGT TGTTTAG ACAAC TCCGTCATTAAATGC TERM 1559 964683 - 964644 - G 76 -9.4 -3.42996 | overlap 964680 TATCATCTATCACAA TCGCTAATTTTCCCGCTT GAGC AAGCGGTGAAATCAGCAA CAAAATTTGCCAAAA APL_0831 965939 - 964740 - | membrane-bound metallopeptidase TERM 1560 965338 - 965358 + g 77 -6.2 -4.68612 | gap 1, opp_overlap 965337 GTTTTATTAATTGAG CGCAACGTG GTTT CACGTT-CG TTTTGTACTTTCTTT TERM 1561 965543 - 965527 - G 72 -7.9 -3.80174 | opp_overlap 965527 965526 ATATGCGCATAATAA GCGGTCA TTC TGTCCGC ATTTTTAGCACTTTC gpmA 966118 - 966801 + | 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase TERM 1562 966849 - 966826 - T 100 -11 -5.27335 | opp_overlap 966826 TTCCTCAAACAAAAA CGCTCGAAGC CAAA ACTCCGAGCG TTTCTTTTTGCAAAA TERM 1563 966826 - 966849 + T 90 -8.1 -4.85782 | opp_overlap 966826 TTCCTCAAACAAAAA CGCTCGAAG CCAAAA CTCCGAGCG TTTCTTTTTGCAAAA APL_0833 967520 - 966885 - | hypothetical protein udk 967638 - 968291 + | uridine kinase TERM 1564 968855 - 968842 - g 75 -3.1 -5.19879 | gap 1, opp_overlap 968843 968851, overlap 968836 968843 CGCCAAATATAAAAA CCAGCA AAG TGC-GG TTTCCAGCCGAATTA dcd 968300 - 968884 + | deoxycytidine triphosphate deaminase APL_0836 969507 - 968953 - | putative transcriptional regulator TERM 1565 969584 - 969603 + H 74 -2.1 -5.51165 | TATATTGATTATTAT TGATTGC AGATAA GCGGTCA TTTTTTTAGAATTTT APL_0837 969648 - 970709 + | hypothetical protein TERM 1566 971002 - 971029 + G 88 -9.3 -4.25283 | gap 1, overlap 971005 GCAAAAATCTCTATC TC-ACGTTGTCG ATTTA CGACAACGTCGA TTTTCATGCGCGCCT TERM 1567 971005 - 971025 + G 77 -11.2 -2.77781 | overlap 971002 AAAATCTCTATCTCA CGTTGTCG ATTTA CGACAACG TCGATTTTCATGCGC TERM 1568 971598 - 971618 + G 77 -10.5 -3.21912 | opp_overlap 971597 GTCAGTTTTGAAATT GCCAAAGGT GAG ATCTTTGGC TTCCTCGGTTCAAAC APL_0838 970713 - 973454 + | ABC transporter ATP-binding protein TERM 1569 973962 - 973977 + G 72 -7.6 -3.86015 | opp_overlap 973956 TTTATATAACCCTAA CCATTC AAGC GAATGG TTTATGGGAACGGTA APL_0839 973456 - 974580 + | inner membrane transport permease APL_0840 974597 - 975991 + | outer membrane protein TERM 1570 976057 - 976028 - T 88 -7.3 -4.89838 | opp_overlap 976035 976037, overlap 976035 GCAATAAATACAAAA CAAAAAAGAGATC CGAA GATCCCTTTTTTT ATGTCGCTGGATTAG TERM 1571 976035 - 976050 + T 82 -3.2 -5.72616 | opp_overlap 976028 976035, overlap 976037 ATACAAAACAAAAAA GAGATC CGAA GATCCC TTTTTTTATGTCGCT TERM 1572 976050 - 976035 - T 91 -5.4 -5.8901 | opp_overlap 976035 976037, overlap 976028 ATACAAAACAAAAAA GAGATC CGAA GATCCC TTTTTTTATGTCGCT pntB 977517 - 976069 - | pyridine nucleotide transhydrogenase pntA 979066 - 977528 - | NAD(P) transhydrogenase subunit alpha TERM 1573 978138 - 978126 - G 70 -7.7 -3.66095 | opp_overlap 978126 978122 AAACGTGCAGGGAAA TCGGT ATA ACCGA TAACTTTTACTTGAT APL_0843 979271 - 980002 + | tRNA/rRNA methyltransferase TERM 1574 980041 - 980008 - T 100 -6.7 -6.11392 | opp_overlap 980008 980010, overlap 980009 980010 AAATAAATAAAAAAA CGCCCCAAAATATCG TTCT CGATTTTCTGGGGTA TTTTTCTTACTGCCT TERM 1575 980008 - 980041 + T 76 -4.5 -5.14163 | opp_overlap 980008 980009 980010, overlap 980010 AAATAAATAAAAAAA CGCCCCAAAATATCG TTCT CGATTTTCTGGGGTA TTTTTCTTACTGCCT TERM 1576 980040 - 980009 - T 81 -8 -4.21345 | opp_overlap 980008 980010, overlap 980008 980010 AATAAATAAAAAAAC GCCCCAAAATATCG TTCT CGATTTTCTGGGGT ATTTTTCTTACTGCC TERM 1577 980010 - 980039 + T 89 -9.3 -4.19587 | opp_overlap 980009 980008 980010, overlap 980008 ATAAATAAAAAAACG CCCCAAAATATCG TTCT CGATTTTCTGGGG TATTTTTCTTACTGC TERM 1578 980039 - 980010 - T 84 -11.5 -3.09147 | opp_overlap 980010 980008, overlap 980009 980008 ATAAATAAAAAAACG CCCCAAAATATCG TTCT CGATTTTCTGGGG TATTTTTCTTACTGC queF 980887 - 980048 - | 7-cyano-7-deazaguanine reductase gmhB 981445 - 980900 - | D,D-heptose 1,7-bisphosphate phosphatase TERM 1579 981121 - 981139 + g 73 -7.4 -4.21773 | overlap 981123 ACATTCCTGCTTTCG GTTTGCGA CAA TCGCAATC TTCTTTATATTCGCC TERM 1580 981123 - 981137 + g 73 -8.6 -3.70022 | overlap 981121 ATTCCTGCTTTCGGT TTGCGA CAA TCGCAA TCTTCTTTATATTCG bcp 981918 - 981448 - | thioredoxin-dependent thiol peroxidase TERM 1581 981967 - 981940 - R 100 -14.3 -5.4477 | opp_overlap 981938 981937 981966 AAATTCCTAAAAAAA GACCGCTTGTA TTCTAC TACAAGCGGTC AAATCTTTGAATTTT APL_0847 983150 - 981993 - | coproporphyrinogen III oxidase TERM 1582 983358 - 983342 - H 76 -3.7 -5.22039 | TTTAAATCTAAAAAA GAACACT ATC ATTGTTC AGATTAAGGTTGTGC TERM 1583 983470 - 983502 + G 77 -10.5 -3.182 | overlap 983498 ATGAAGCTTCTTGCC GGTGTCGGAGCAGGC TTT GCATTCTCCGGTACC TTAGGTCCTTTCTCT TERM 1584 984665 - 984679 + G 72 -9.2 -3.08798 | overlap 984645 AAGTGGTTATCGCAC CGGGCG ATC CGTCCG TATTCGGTAACGACT APL_0848 983413 - 984987 + | putative ABC transporter periplasmic binding protein TERM 1585 985021 - 985000 - f 72 -5.1 -4.65747 | opp_overlap 985000 985002, overlap 985002 TAACCTCTAATAAAA TGCCCTTTG TCGT CCAAAGGCA AAGGGTATTACTTAA TERM 1586 985000 - 985028 + F 75 -8.9 -3.43338 | opp_overlap 985000 985002, overlap 985002 TAACCTCTAATAAAA TGCCCTTTGTCGT CCA AAGGCAAAGGGTA TTACTTAATATAACT TERM 1587 985002 - 985026 + F 77 -9.3 -3.28487 | opp_overlap 985000 985002, overlap 985000 ACCTCTAATAAAATG CCCTTTGTCGT CCA AAGGCAAAGGG TATTACTTAATATAA APL_0849 985086 - 986039 + | inner membrane ABC transporter permease APL_0850 986039 - 988012 + | ABC transporter, ATP-binding/permease APL_0851 988016 - 988822 + | ABC transporter, ATP-binding subunit TERM 1588 988838 - 988856 + F 100 -11.7 -4.51174 | TTTATCTCATATTCA GGGCAGG TTTAT CCTGCCC TTTTACTTATACTGA APL_0852 988874 - 990472 + | putative FAD flavoprotein oxidase TERM 1589 990516 - 990488 - T 100 -13.3 -5.34632 | opp_overlap 990492, overlap 990492 AACAAAATACAAAAA TAAAGGGCAAGAT TTT ATCTTGCCCTTTT GATCATCCGTTTAGC TERM 1590 990512 - 990492 - T 100 -14.1 -5.0707 | opp_overlap 990492, overlap 990488 AAATACAAAAATAAA GGGCAAGAT TTT ATCTTGCCC TTTTGATCATCCGTT TERM 1591 990492 - 990512 + T 100 -14.1 -4.31692 | opp_overlap 990492 990488 AAATACAAAAATAAA GGGCAAGAT TTT ATCTTGCCC TTTTGATCATCCGTT APL_0853 991691 - 990534 - | methionine synthase II (cobalamin-independent) TERM 1592 990840 - 990829 - G 73 -5.8 -4.45738 | overlap 990838 TACTCTAAGAAGAAA CCGT CAAT ACGG CAGGTACCGAATAAA TERM 1593 991229 - 991273 + g 95 -8 -5.24129 | opp_overlap 991229 991227 991244 TAATTAAATGTAACA TTGACGGCGAAG-GAATGGTGA ATT TCACC-TCCGTTTCGCCGGCAA TTTTTTGTAGCGAAC TERM 1594 991467 - 991453 - G 80 -11.4 -2.60257 | opp_overlap 991453, overlap 991450 991449 ATATGCCAGAACGTA CGGCGA AAT TCGCCG TCAGTTACCGCGTGT TERM 1595 991453 - 991467 + g 79 -11.4 -2.53015 | opp_overlap 991453 991450 991449 ATATGCCAGAACGTA CGGCGA AAT TCGCCG TCAGTTACCGCGTGT metF 991911 - 992792 + | 5,10-methylenetetrahydrofolate reductase TERM 1596 992833 - 992798 - T 87 -11.4 -3.27676 | opp_overlap 992803, overlap 992803 ACCGACTTAAATAGA CAAAACGCACTAAATC CTAA AATTTAGTGCGTTTTT AAGTAACAACAAGCG TERM 1597 992828 - 992803 - T 100 -11.3 -4.74013 | opp_overlap 992803, overlap 992798 CTTAAATAGACAAAA CGCACTAAATC CTAA AATTTAGTGCG TTTTTAAGTAACAAC TERM 1598 992803 - 992828 + T 100 -10.6 -4.65895 | opp_overlap 992803 992798 CTTAAATAGACAAAA CGCACTAAAT CCTAAA ATTTAGTGCG TTTTTAAGTAACAAC TERM 1599 993022 - 992986 - T 93 -14 -2.66733 | opp_overlap 992991, overlap 992989 TGCTAATTGACACCA TAAGACCTCCATAAAC ATACA GTTTATCGAGGTCTTA ACAAAAAAGCTGAGA TERM 1600 993019 - 992989 - T 89 -11.3 -3.48288 | opp_overlap 992991, overlap 992986 TAATTGACACCATAA GACCTCCATAAAC ATACA GTTTATCGAGGTC TTAACAAAAAAGCTG hbpA 994665 - 993070 - | heme-binding protein A precursor TERM 1601 994836 - 994824 - H 77 -3.5 -5.40004 | overlap 994817 GAGGAAAGTAAAAAA TTTAA CGC TTAAA AAACAAAGTTAAGCA TERM 1602 996063 - 996076 + G 79 -8.1 -4.39002 | opp_overlap 996063 996062 GTAGCAACCATTAAC CCGAG TATT CTCGG TTTTATCGAAAGTTT sdaC 995022 - 996251 + | serine transporter TERM 1603 996284 - 996319 + F 76 -6.4 -4.62336 | gap 1 CCTTTCCAATTTTCA GGCAATAAAC-CTAA TATATCT TTGGTGTTTATTGCC TTTTTAACATAGAGT sdaA 996347 - 997726 + | L-serine dehydratase TERM 1604 997793 - 997773 - T 95 -12.6 -3.66018 | opp_overlap 997768 997773 TTATGATTTGAAGAA CTGAGCGG ATTAA CCGCTCAG TTGAGTTATTTCTTA TERM 1605 997773 - 997793 + T 93 -12.6 -3.37303 | opp_overlap 997773, overlap 997768 TTATGATTTGAAGAA CTGAGCGG ATTAA CCGCTCAG TTGAGTTATTTCTTA TERM 1606 997863 - 997894 + T 100 -11.8 -5.52909 | opp_overlap 997868, overlap 997868 TAGGATAATGAATTA AAAAACCTCGAATA TCAT TATTCGAGGTTTTG TTTTTTTAACTATTC TERM 1607 997889 - 997868 - T 100 -11.7 -5.32565 | opp_overlap 997863 997868 TAATGAATTAAAAAA CCTCGAATA TCAT TATTCGAGG TTTTGTTTTTTTAAC TERM 1608 997868 - 997889 + T 100 -11.7 -5.55855 | opp_overlap 997868, overlap 997863 TAATGAATTAAAAAA CCTCGAATA TCAT TATTCGAGG TTTTGTTTTTTTAAC mnmC 999919 - 997904 - | 5-methylaminomethyl-2-thiouridine methyltransferase TERM 1609 999498 - 999534 + g 89 -6.6 -5.252 | gap 1, opp_overlap 999496 TCGAAATGATAACGC TGACAGCCTGTTTGGCG AGGT TGCCAA-CAAGCGGTCA TTTTTTGTGAAAGTG TERM 1610 999980 - 999928 - R 100 -15 -4.21974 | opp_overlap 999928 999935, overlap 999935 TTACCACGGAATAAA CGGAAAAGCACGGAAGTCACTG TAACGCCCT CTGTGCTTTCCGTGCTTTTCCG CAGTAACAGATTAGA TERM 1611 999935 - 999973 + r 71 -6.7 -4.09685 | opp_overlap 999935 999928, overlap 999928 GGAATAAACGGAAAA GCACGGAAGTCACTG TAACGCCCT CTGTGCTTTCCGTGC TTTTCCGCAGTAACA trpCF 1001533 - 1000124 - | bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase fic 1001711 - 1002376 + | filamentation induced by cAMP protein Fic-like protein APL_0861 1002384 - 1002695 + | hypothetical protein TERM 1612 1003289 - 1003276 - g 80 -4.5 -5.15969 | opp_overlap 1003276 1003277, overlap 1003277 CTTTAACCGAAAAAA CCGGT TGCG ACCGA TTAATGCTACATTCG TERM 1613 1003361 - 1003333 - g 93 -11.1 -4.14739 | opp_overlap 1003332, overlap 1003352 TTACGCACCCGAAAA CGGCGCAAAAAAT CGA AATTTTTGCACCG CTTGATAAACAATGG truC 1002696 - 1003439 + | tRNA pseudouridine synthase C APL_0863 1003441 - 1003605 + | hypothetical protein APL_0864 1003602 - 1004054 + | hypothetical protein TERM 1614 1004058 - 1004089 + T 100 -7.4 -5.85244 | gap 1, opp_overlap 1004061, overlap 1004061 GTAACCAAATAAAGC AAACGCCGCTATGCA CGA TG-ATAGTGGCGTTC TTTTTTATTTTAGTT TERM 1615 1004086 - 1004061 - T 78 -6.9 -4.28115 | gap 1, opp_overlap 1004058 1004061 ACCAAATAAAGCAAA CGCCGCTATGCA CGA TG-ATAGTGGCG TTCTTTTTTATTTTA TERM 1616 1004061 - 1004086 + T 100 -9.1 -4.94109 | gap 1, opp_overlap 1004061, overlap 1004058 ACCAAATAAAGCAAA CGCCGCTATGCA CGA TG-ATAGTGGCG TTCTTTTTTATTTTA aape0934 1004938 - 1004099 - | hypothetical protein TERM 1617 1005047 - 1005030 - g 80 -6.3 -4.75954 | overlap 1005031 AAAATCCAAAACAAA CTGCACA AATT TGTGCAA CGCGGTTTAGACAAT TERM 1618 1006099 - 1006114 + G 71 -6.8 -4.14472 | gap 1, opp_overlap 1006098 1006099 AATTAGTGCAAGAAG GCGGACG ACA CG-CCGC TTTTGACGGTATTGA APL_0866 1004961 - 1006415 + | hypothetical protein TERM 1619 1006418 - 1006469 + F 71 -7.4 -3.67175 | opp_overlap 1006425, overlap 1006416 1006419 1006422 1006425 1006432 TATGTTGGAATAGTC ATCACAAGCGGTTATTTTTGCAAA ATTT TTCGCAAATTTAACCGCTTGTCAC TTGATTTTAAACGGT TERM 1620 1006419 - 1006468 + F 81 -10.9 -2.79823 | opp_overlap 1006425, overlap 1006418 1006416 1006422 1006425 1006432 ATGTTGGAATAGTCA TCACAAGCGGTTATTTTTGCAAA ATTT TTCGCAAATTTAACCGCTTGTCA CTTGATTTTAAACGG TERM 1621 1006422 - 1006465 + F 86 -12.6 -2.66118 | opp_overlap 1006425, overlap 1006419 1006418 1006416 1006425 1006432 TTGGAATAGTCATCA CAAGCGGTTATTTTTGCAAA ATTT TTCGCAAATTTAACCGCTTG TCACTTGATTTTAAA TERM 1622 1006462 - 1006425 - f 87 -10.7 -3.44206 | opp_overlap 1006422 1006419 1006418 1006416 1006425 1006432 GAATAGTCATCACAA GCGGTTATTTTTGCAAA ATTT TTCGCAAATTTAACCGC TTGTCACTTGATTTT TERM 1623 1006425 - 1006462 + F 75 -8.5 -3.46808 | opp_overlap 1006425, overlap 1006422 1006419 1006418 1006416 1006432 GAATAGTCATCACAA GCGGTTATTTTTGCAAA ATTT TTCGCAAATTTAACCGC TTGTCACTTGATTTT TERM 1624 1006962 - 1006945 - g 75 -2 -5.2696 | gap 1, overlap 1006948 GCAAAAGGTAAAAAA CTACACG ATAAA CGTG-AG GACATTAAAGACCGT smpB 1006549 - 1007028 + | SsrA-binding protein TERM 1625 1007066 - 1007082 + F 71 -3 -5.1287 | gap 1, opp_overlap 1007065 1007066, overlap 1007066 1007067 CAAGCACGGAACAAG C-GGTCA AATT TGACCCG TTTTTTGCCTCTCCG serS 1007146 - 1008453 + | seryl-tRNA synthetase TERM 1626 1008474 - 1008508 + T 88 -7.3 -5.09173 | opp_overlap 1008474 1008479, overlap 1008479 1008507 TATTCTTATCAAGTA GAAAAGCCAACTC AAATTTGCC GAGTTGGCTTTTA TTTTTTCAAATATTC TERM 1627 1008479 - 1008503 + T 93 -7.2 -5.42198 | opp_overlap 1008474 1008479, overlap 1008474 TTATCAAGTAGAAAA GCCAACTC AAATTTGCC GAGTTGGC TTTTATTTTTTCAAA TERM 1628 1008503 - 1008479 - T 89 -8.6 -4.56607 | opp_overlap 1008479 1008474, overlap 1008474 TTATCAAGTAGAAAA GCCAACTCAA ATTTG CCGAGTTGGC TTTTATTTTTTCAAA abgB 1009792 - 1008524 - | aminobenzoyl-glutamate utilization-like protein TERM 1629 1009092 - 1009105 + g 74 -9.5 -3.30771 | ACTTGCGGAGCCGCA CCGGC ATGA GCCGG TTGTCCGAAATATCG TERM 1630 1009427 - 1009412 - G 70 -7.6 -3.71794 | ATTTAATGATGCAAA TCCCAA TTGA TTGGGA ATATGAACATCCGAT APL_0870 1011178 - 1009886 - | putative C4-dicarboxylate transporter TERM 1631 1010760 - 1010746 - G 71 -7 -4.07687 | overlap 1010747 ATGTTCCTGCCAAAA TCGCCG CAC CGGCGG TTGCAGGGCGTACTC TERM 1632 1010759 - 1010747 - G 76 -10.5 -3.04398 | overlap 1010746 TGTTCCTGCCAAAAT CGCCG CAC CGGCG GTTGCAGGGCGTACT TERM 1633 1010929 - 1010949 + g 76 -9.7 -3.3487 | opp_overlap 1010929 1010934, overlap 1010927 1010925 TAGTCAGCAAATGCA CCAAATGCG TAT CGCATTGGG TATATTTCATTACAT TERM 1634 1010949 - 1010929 - G 71 -9.7 -2.68279 | opp_overlap 1010927 1010925 1010929, overlap 1010934 TAGTCAGCAAATGCA CCAAATGCG TAT CGCATTGGG TATATTTCATTACAT pepE 1011893 - 1011189 - | peptidase E TERM 1635 1011994 - 1011961 - H 76 -3.9 -5.36689 | overlap 1011963 AAAGCAAAAACAAAA CTTCTATTTTTTGAC AGTT GTCACAAAATAGCCG ACGCTTCCTACAAAT TERM 1636 1012476 - 1012491 + G 75 -5.4 -4.79352 | ATATATGAAAGGTCA GCTCAA AATG TTGGGC TTTTCTTATGACTGG TERM 1637 1014599 - 1014583 - g 73 -8.7 -3.5394 | opp_overlap 1014577 1014576, overlap 1014587 AAAGTTCGTGGTAAA GTTACCG TTT CGGCAAC AGCAACCGAAGATGA leuS 1012144 - 1014729 + | leucyl-tRNA synthetase TERM 1638 1014768 - 1014744 - f 75 -8.5 -3.37513 | opp_overlap 1014747, overlap 1014747 ATAGCCTAATAGCAA TGAGGGCGAAC TAT GTTCGCCCTTT ATTGTGAATATTACG TERM 1639 1014747 - 1014765 + F 100 -14.6 -4.35091 | opp_overlap 1014744 1014747 GCCTAATAGCAATGA GGGCGAAC TAT GTTCGCCC TTTATTGTGAATATT TERM 1640 1014765 - 1014747 - f 95 -14.6 -2.84723 | opp_overlap 1014747, overlap 1014744 GCCTAATAGCAATGA GGGCGAAC TAT GTTCGCCC TTTATTGTGAATATT rlpB 1014837 - 1015331 + | putative rare lipoprotein B holA 1015440 - 1016465 + | DNA polymerase III subunit delta yacG 1016730 - 1016542 - | putative zinc-binding protein coaE 1017350 - 1016712 - | dephospho-CoA kinase apfD 1018010 - 1017372 - | fimbrial leader peptidase TERM 1641 1017530 - 1017518 - G 70 -2.7 -4.92757 | CGATCAATAATAAAA GAAAA ACC TCTTC CAATGAGAATAAGGG apfC 1019239 - 1018037 - | fimbrial biogenesis protein TERM 1642 1018510 - 1018528 + g 75 -2.4 -5.40072 | overlap 1018513 ACATCCCGTTTTTTA TAGCGGTT AAA AATCGATA TTTTTTTGCAAAAAA TERM 1643 1018744 - 1018757 + g 100 -3.9 -5.92399 | TCAAAGTGACGACAG GATAA AACA TTATC TTTTTTATTTTCTTA apfB 1020617 - 1019223 - | fimbrial biogenesis protein apfA 1021081 - 1020635 - | type 4 prepilin subunit ApfA precursor radA 1021263 - 1022642 + | DNA repair protein RadA TERM 1644 1022677 - 1022645 - T 83 -10.7 -3.06261 | opp_overlap 1022651, overlap 1022651 CGGCAATCTCTAATA CAAAAACAGACCG TGATAAG CGGTCTGTTTTAG TTAAAATCTTACGAA TERM 1645 1022651 - 1022671 + T 89 -9 -4.42639 | opp_overlap 1022651 1022645 TCTCTAATACAAAAA CAGACCGT GATAA GCGGTCTG TTTTAGTTAAAATCT TERM 1646 1022671 - 1022651 - T 90 -8.3 -5.0916 | opp_overlap 1022651, overlap 1022645 TCTCTAATACAAAAA CAGACCG TGATAAG CGGTCTG TTTTAGTTAAAATCT APL_0882 1022919 - 1022686 - | hypothetical protein TERM 1647 1023027 - 1023043 + r 84 -5.9 -5.24647 | overlap 1023028 TAAAGATTAATTGTT TGCTTAT AAA ATAAGCG TTTTATTTTCTCTCT TERM 1648 1023028 - 1023042 + r 70 -7.2 -3.72348 | overlap 1023027 AAAGATTAATTGTTT GCTTAT AAA ATAAGC GTTTTATTTTCTCTC folA 1023534 - 1023046 - | dihydrofolate reductase TERM 1649 1024218 - 1024205 - g 70 -9.5 -2.73619 | overlap 1024204 AATCACGCCTGAAAT CCGCC AAAT GGCGG GCGGTAGCGTCACCG proB 1023621 - 1024712 + | gamma-glutamyl kinase TERM 1650 1025180 - 1025198 + G 100 -12.4 -5.15969 | TTATGACGGTATGTT CGGACCGG CAA CCGGTTCG TTTTTTACCTTAGCC TERM 1651 1025319 - 1025338 + G 70 -3.6 -4.81814 | overlap 1025320 TTTATGTTGGGCGGT GCGATTTT ATGG AAAATCGG TTTTATTATGATGAT APL_0885 1024725 - 1025501 + | hypothetical protein TERM 1652 1025674 - 1025649 - g 100 -9.7 -4.4448 | AAAGGGGTAAATAAA GCGACCGATAA ATTG TTTCCGGTCGC TAACACGCCGCAAGC nth 1025502 - 1026134 + | endonuclease III TERM 1653 1026158 - 1026207 + F 89 -11.7 -3.50893 | overlap 1026147 1026152 TGTCTTGCGTAACAC GCGGTGATATTTTCCCGAGGTTT TGCA AAATATTGTGAAAATATCATCGC TTGTCGTATATCATT TERM 1654 1027391 - 1027402 + G 75 -5.8 -4.62069 | opp_overlap 1027391 1027398, overlap 1027382 GCCAGCCAAATATTA GCGA ATAT TCGC TTTTTCGAATCGGAC fadI 1026344 - 1027648 + | 3-ketoacyl-CoA thiolase fadJ 1027658 - 1029775 + | putative fatty acid oxidation complex alpha subunit TERM 1655 1029793 - 1029814 + F 82 -4.4 -5.46657 | opp_overlap 1029793 TACTTGACTAAAAAA CCGGAC TTTTACAATC GTCCGG TTTTTTATTAGAATC TERM 1656 1029814 - 1029793 - f 76 -4.4 -5.15634 | opp_overlap 1029793 TACTTGACTAAAAAA CCGGAC TTTTACAATC GTCCGG TTTTTTATTAGAATC TERM 1657 1030125 - 1030110 - g 89 -6.2 -5.30686 | AAGACGGAGAAAAAA CCTTTA CGTT TAAAGG TAACGATAAAGTTTA TERM 1658 1030673 - 1030662 - g 70 -5.8 -4.25283 | ATTTTTCGATTAAAA CGGA TTGG TCCG AAGGTAACAAAACTG APL_0889 1029866 - 1031281 + | hypothetical protein TERM 1659 1031299 - 1031356 + T 100 -9.5 -4.66537 | gap 1, opp_overlap 1031300 1031303, overlap 1031300 ACTGAAAAGCCATAA ACAAGCGGTCTGTTTTAGGAAAGTATTT GCA AAATA-TTTCACAAAACAGACCACTTGC TTTTGTCTTAAAGCC TERM 1660 1031355 - 1031300 - T 100 -17.4 -4.06179 | gap 1, opp_overlap 1031300 1031299, overlap 1031303 CTGAAAAGCCATAAA CAAGCGGTCTGTTTTAGGAAAGTATTT GCA AAATA-TTTCACAAAACAGACCACTTG CTTTTGTCTTAAAGC TERM 1661 1031300 - 1031355 + T 93 -13 -3.3944 | gap 1, opp_overlap 1031300 1031303, overlap 1031299 CTGAAAAGCCATAAA CAAGCGGTCTGTTTTAGGAAAGTATTT GCA AAATA-TTTCACAAAACAGACCACTTG CTTTTGTCTTAAAGC TERM 1662 1031352 - 1031303 - T 100 -13.3 -4.13814 | gap 1, opp_overlap 1031300 1031299, overlap 1031300 AAAAGCCATAAACAA GCGGTCTGTTTTAGGAAAGTATTT GCA AAATA-TTTCACAAAACAGACCAC TTGCTTTTGTCTTAA APL_0890 1032296 - 1031364 - | hypothetical protein fdhD 1033104 - 1032298 - | formate dehydrogenase accessory protein-like protein TERM 1663 1032615 - 1032635 + g 79 -8.2 -4.15044 | opp_overlap 1032614 1032615, overlap 1032628 1032629 GCGGAGAAAAAAATG CCGCCGCA TGGCT TGCGCCGG TTTGTTGAGCCAACC TERM 1664 1032699 - 1032718 + g 81 -4.2 -5.40474 | overlap 1032700 1032702 CGAATATTTGCGGAT TTACCGCT TGCA AGCGGTCG TTTTTTTGCAAAAAT fdxG 1033523 - 1034110 + | formate dehydrogenase, nitrate-inducible, major subunit TERM 1665 1034321 - 1034331 + G 74 -6.8 -4.27519 | overlap 1034311 TTTAACCGTACGGCA TCCG TTG CGGA TTTCTATTCTCCGAT TERM 1666 1034693 - 1034677 - g 70 -8.1 -3.59252 | overlap 1034675 CGGTACCAAACAAGA CAAATTC TTA GAATTTG CTCAAACCATCGCAT fdxG 1034159 - 1036582 + | formate dehydrogenase, nitrate-inducible, major subunit TERM 1667 1037129 - 1037117 - g 76 -7.7 -4.09685 | opp_overlap 1037117 CGGCATGTGTGAAAA CCTGT CCG ACAGG TGCTATTCGTTTCGG fdxH 1036582 - 1037481 + | formate dehydrogenase, iron-sulfur subunit TERM 1668 1037520 - 1037493 - g 70 -7.1 -3.76534 | opp_overlap 1037500, overlap 1037496 GTAAGAAATTTGAAA TTACGAACGAT ACCAAA ATCGTTCGTCA TAAACCGCTTGCCCG fdnI 1037474 - 1038145 + | formate dehydrogenase, cytochrome b556 subunit TERM 1669 1038151 - 1038195 + F 95 -14.8 -2.80784 | gap 1, opp_overlap 1038147 1038164, overlap 1038164 AAATAACTAATTCTT TTTAAAGATACAAGTGCGGTA AACT TACCGCACTT-TATTTTTAAA TACTTGCTAAATTTC TERM 1670 1038164 - 1038183 + F 100 -12.2 -4.89063 | opp_overlap 1038164, overlap 1038151 TTTTTAAAGATACAA GTGCGGTA AACT TACCGCAC TTTATTTTTAAATAC TERM 1671 1038183 - 1038164 - f 91 -12.2 -3.76232 | opp_overlap 1038151 1038164 TTTTTAAAGATACAA GTGCGGTA AACT TACCGCAC TTTATTTTTAAATAC TERM 1672 1038197 - 1038235 + F 80 -9.1 -3.53012 | opp_overlap 1038196 1038198, overlap 1038198 ACTTTATTTTTAAAT ACTTGCTAAATTTCTTT TGACT AAGGGAATTTAGCAAGA TTTAACGAGAGAACA TERM 1673 1038198 - 1038234 + F 86 -12.6 -2.71712 | opp_overlap 1038198 1038196, overlap 1038197 CTTTATTTTTAAATA CTTGCTAAATTTCTTT TGACT AAGGGAATTTAGCAAG ATTTAACGAGAGAAC TERM 1674 1038234 - 1038198 - f 72 -8.2 -3.36515 | opp_overlap 1038197 1038198, overlap 1038196 CTTTATTTTTAAATA CTTGCTAAATTTCTTT TGACT AAGGGAATTTAGCAAG ATTTAACGAGAGAAC fdhE 1038255 - 1039172 + | formate dehydrogenase accessory protein FdhE TERM 1675 1039189 - 1039212 + F 100 -14 -4.34402 | opp_overlap 1039189 1039192 CCCTTCCTTTACTAA TAAGCGGTCA AATT TGACCGCTTA TTTTCATCTAAACAG TERM 1676 1039212 - 1039189 - f 93 -14 -3.14132 | opp_overlap 1039189, overlap 1039192 CCCTTCCTTTACTAA TAAGCGGTCA AATT TGACCGCTTA TTTTCATCTAAACAG TERM 1677 1039209 - 1039192 - f 90 -11.3 -3.71848 | opp_overlap 1039189, overlap 1039189 TTCCTTTACTAATAA GCGGTCA AATT TGACCGC TTATTTTCATCTAAA TERM 1678 1040250 - 1040232 - g 83 -11.6 -2.93357 | opp_overlap 1040231 1040233, overlap 1040229 AATTACTGGAAAGTA CCGGCGTG AAT CTCGCCGG ATTACATGCCGTTGT folD 1039775 - 1040632 + | bifunctional protein FolD TERM 1679 1040656 - 1040677 + F 100 -11.7 -5.17353 | opp_overlap 1040656 TTATTCCGCAATTAA GCCTCTTTT GAAA AAAAGAGGC TTTTTTACTGAATAT TERM 1680 1040677 - 1040656 - f 89 -11.7 -3.34344 | opp_overlap 1040656 TTATTCCGCAATTAA GCCTCTTTT GAAA AAAAGAGGC TTTTTTACTGAATAT APL_0898 1040777 - 1042315 + | putative oxalate/formate antiporter TERM 1681 1042390 - 1042361 - T 74 -9.4 -3.01791 | opp_overlap 1042366, overlap 1042366 ACCGCTTGTCTAATA TAAAACCCCGTA TTCAAG TACGGGGTTTTT ATCTATAGCTAATAA TERM 1682 1042366 - 1042385 + T 100 -10 -5.04597 | opp_overlap 1042361 1042366 TTGTCTAATATAAAA CCCCGTAT TCAA GTACGGGG TTTTTATCTATAGCT TERM 1683 1042385 - 1042366 - T 100 -9.3 -4.66537 | opp_overlap 1042366, overlap 1042361 TTGTCTAATATAAAA CCCCGTA TTCAAG TACGGGG TTTTTATCTATAGCT dapA 1043300 - 1042413 - | dihydrodipicolinate synthase TERM 1684 1043456 - 1043424 - R 100 -10 -5.65927 | opp_overlap 1043424 1043428 TACGGAAAGAAAAAA TAAACCCGACACTA TTAAT TCATGTCGGGTTTA TTTTAATCGTATAAA TERM 1685 1043424 - 1043456 + r 81 -7.9 -4.33274 | opp_overlap 1043424, overlap 1043428 TACGGAAAGAAAAAA TAAACCCGACA CTATTAATTCA TGTCGGGTTTA TTTTAATCGTATAAA TERM 1686 1043428 - 1043452 + r 70 -4.3 -4.73614 | opp_overlap 1043424, overlap 1043424 GAAAGAAAAAATAAA CCCGACA CTATTAATTCA TGTCGGG TTTATTTTAATCGTA lpxL 1044400 - 1043459 - | lipid A biosynthesis lauroyl acyltransferase APL_0901 1044565 - 1044879 + | ribosome-associated inhibitor A TERM 1687 1044906 - 1044928 + T 100 -12.8 -5.41359 | opp_overlap 1044906 ACAATTGAAGATAAA GCCAAATCGA ATT TCGGTTTGGC TTTTTTAATTTAATT TERM 1688 1044928 - 1044906 - T 100 -10.6 -4.24397 | opp_overlap 1044906 ACAATTGAAGATAAA GCCAAATCGA ATT TCGGTTTGGC TTTTTTAATTTAATT truA 1045726 - 1044938 - | tRNA pseudouridine synthase A TERM 1689 1045608 - 1045630 + g 73 -8.4 -3.66028 | opp_overlap 1045599 AAAACCTCTATCGGC GCGTTGGCGA CAA TCGACAATGC TTCTTCCAGCTTCTG TERM 1690 1045797 - 1045749 - R 100 -10.6 -5.21709 | gap 1, opp_overlap 1045751 1045754 1045763 CTCTACATCAAAAAA GATAAGCGGTTAAATTTT-GCAA AAAT TTGCCAAAATCAGACCGCTTATC CGTTCAATTATTTAT folE 1046461 - 1045805 - | GTP cyclohydrolase I TERM 1691 1045878 - 1045861 - G 71 -4.7 -4.63218 | overlap 1045863 TGTCTTCTAAGAAAA CGCCGCC GAAT GCCGACG TTACCGTATAGCTAT kdkA 1046562 - 1047266 + | 3-deoxy-D-manno-octulosonic-acid kinase TERM 1692 1047307 - 1047283 - T 82 -4.4 -5.5112 | opp_overlap 1047283 1047286 GCTATTAATAAAAAA GAAGAAAG TTTGAAAGG CTTTCTTC TTTAGCTATATGAAA TERM 1693 1047283 - 1047307 + T 79 -8.7 -3.74077 | opp_overlap 1047283, overlap 1047286 GCTATTAATAAAAAA GAAGAAAGTTT GAA AGGCTTTCTTC TTTAGCTATATGAAA APL_0905 1047684 - 1047346 - | hypothetical protein APL_0906 1048318 - 1047743 - | putative acetyltransferase TERM 1694 1048396 - 1048347 - R 93 -11.7 -4.07746 | opp_overlap 1048344 1048347, overlap 1048342 TTTTCAAAAAGATAA GCGGTCAAATTCCTCTCATTTTT TGCA AAAATTTAGAAAAACTTGACCGC TTGTTATTATTTCAA APL_0907 1049545 - 1048403 - | hypothetical protein TERM 1695 1049523 - 1049506 - G 70 -5.5 -4.51197 | opp_overlap 1049506 1049507, overlap 1049507 TAGAATTAAGTAAAA GCGCACT AGAA AGTGCGG TTAATTTAGTACGAA TERM 1696 1049522 - 1049507 - G 71 -9 -3.29634 | opp_overlap 1049507 1049506, overlap 1049506 AGAATTAAGTAAAAG CGCACT AGAA AGTGCG GTTAATTTAGTACGA TERM 1697 1049893 - 1049905 + G 93 -9.1 -4.57073 | opp_overlap 1049892 TTATCACTAACTCAC GCTGG TAA CCAGC TTTTTCAAACCGCTG APL_0908 1049704 - 1050588 + | putative transcriptional regulator TERM 1698 1050635 - 1050591 - T 100 -9.5 -4.78572 | opp_overlap 1050591 1050594 GCTTAAGGAATAAAA TAAGCGGTAATTTTTTGCAAA AAA CCTACAAAATTTTACCGCTTA TCGTTTATTACCAGC plpB 1051461 - 1050643 - | outer membrane lipoprotein 2 precursor plpA 1052397 - 1051576 - | outer membrane lipoprotein 1 precursor TERM 1699 1052312 - 1052322 + g 78 -2.4 -5.50925 | GTGGCTTGTGCCGCT GCTG CAT CCGC TTTTTTCTCTTCGTT metI 1053101 - 1052424 - | D-methionine transport system permease protein MetI metN 1054125 - 1053091 - | DL-methionine transporter ATP-binding subunit TERM 1700 1054260 - 1054305 + r 73 -7.7 -3.82117 | opp_overlap 1054264, overlap 1054258 1054264 CATTCTAAGAACGAA AAAAGCGGTTGGATTTGCAAG ATTT TTTACAAATTCAACCGCTTGC TATTTTATCGCTAAG TERM 1701 1054264 - 1054301 + r 95 -12.9 -3.57825 | opp_overlap 1054264, overlap 1054260 1054258 CTAAGAACGAAAAAA GCGGTTGGATTTGCAAG ATTT TTTACAAATTCAACCGC TTGCTATTTTATCGC TERM 1702 1054301 - 1054264 - R 100 -12.2 -5.37865 | opp_overlap 1054264 1054260 1054258 CTAAGAACGAAAAAA GCGGTTGGATTTGCAA GATTTT TTACAAATTCAACCGC TTGCTATTTTATCGC cysS 1055702 - 1054323 - | cysteinyl-tRNA synthetase TERM 1703 1055943 - 1055924 - g 80 -5 -5.09426 | GGTAACCGCAAAAAA CTTTGAAG ATTA CTGCAAAG AAGGCTTCTATAACG ppiB 1055847 - 1056356 + | peptidyl-prolyl cis-trans isomerase B TERM 1704 1056376 - 1056408 + F 100 -12.2 -5.39755 | opp_overlap 1056365 1056376 AAAATCCATTAGAAA TTTGACCGCTTG CACTCAACA CAAGCGGTCAAA TTTTTTATCATTCTG TERM 1705 1056408 - 1056376 - f 100 -14.3 -4.01078 | opp_overlap 1056376, overlap 1056365 AAAATCCATTAGAAA TTTGACCGCTTGCAC TCA ACACAAGCGGTCAAA TTTTTTATCATTCTG TERM 1706 1056585 - 1056601 + G 78 -2.2 -5.47218 | overlap 1056583 AGGTTATCAGCAAGT CGGCAA TGACT TTCCCG TTTTTTTACATCCAA cca 1056460 - 1057695 + | multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase APL_0916 1057930 - 1058280 + | transposase TERM 1707 1058449 - 1058467 + GF 71 -2.4 -5.09225 | ACGGCTATCGTCGTA TTACGTTA AAG TTACGTGA TTTTTTGGGTGCGAT APL_0917 1058292 - 1058627 + | transposase APL_0918 1058593 - 1058949 + | transposase TERM 1708 1059092 - 1059060 - T 100 -17.9 -4.5852 | opp_overlap 1059060 CAAGTGAAATTAAAA GGACTGAGCCCTGTA CAA TACAGAACTCAGTCC TTAAATTAAACAGTA TERM 1709 1059060 - 1059092 + T 93 -13.5 -3.17392 | opp_overlap 1059060 CAAGTGAAATTAAAA GGACTGAGCCCTGTA CAA TACAGAACTCAGTCC TTAAATTAAACAGTA irp 1061495 - 1059147 - | iron-regulated outer membrane protein TERM 1710 1061315 - 1061328 + g 82 -6.7 -4.77896 | CAAGCGCATTGCCCA GCGTT GCCG AACGC TTTTTAAATTCCTTA TERM 1711 1061709 - 1061720 + G 85 -7.2 -4.82863 | TTAAACTTACTCTTG CCGC AATT GCGG TTTCTTTTGTGATTA TERM 1712 1061906 - 1061876 - g 100 -11.8 -4.2828 | opp_overlap 1061885 CCTGAGCTACCAAAA CCGGTGCAACCGGC TAA ACCGGTTACTCCAG CCGAAACACCAAAAC APL_0920 1061681 - 1062937 + | hypothetical protein TERM 1713 1062946 - 1062935 - f 73 -4.4 -4.87318 | GTGAAAACTGAAAAA TAGG CTCG CCTA GCTAAAAGGGCTGGT TERM 1714 1062949 - 1062974 + F 100 -10.5 -4.84359 | opp_overlap 1062954, overlap 1062954 ATAGGCTCGCCTAGC TAAAAGGGCTG GTAA CAGCCCTTTTC TTTTTCTAAGGATAA TERM 1715 1062954 - 1062969 + F 100 -10.4 -5.35224 | opp_overlap 1062954, overlap 1062949 CTCGCCTAGCTAAAA GGGCTG GTAA CAGCCC TTTTCTTTTTCTAAG TERM 1716 1062969 - 1062954 - f 100 -10.4 -4.18018 | opp_overlap 1062954 1062949 CTCGCCTAGCTAAAA GGGCTG GTAA CAGCCC TTTTCTTTTTCTAAG APL_0921 1062993 - 1064408 + | hypothetical protein TERM 1717 1064426 - 1064399 - T 73 -9.4 -2.80796 | opp_overlap 1064399, overlap 1064398 TCTGATCATCGAAAG TCGTTTTTAATC TAAT AATTAAAAACGA TATGATTTGCCCCAA TERM 1718 1064399 - 1064426 + T 71 -8.7 -3.00525 | opp_overlap 1064399 1064398 TCTGATCATCGAAAG TCGTTTTTAAT CTAATA ATTAAAAACGA TATGATTTGCCCCAA APL_0922 1065114 - 1064548 - | hypothetical protein TERM 1719 1065436 - 1065452 + r 76 -2.9 -5.54885 | overlap 1065437 CTTTATTTTCGGACT TTGGCCA AAA TGGGCAG TTTTTTGTTCATATT TERM 1720 1065512 - 1065475 - R 93 -9.3 -4.64766 | gap 1, opp_overlap 1065476 1065477 1065478, overlap 1065478 TTCATATTTCAAAAA GAAGGCTTAAAGCCTTGT ACT ATAAGGCTTTAAGCCA-C TTTTTAGCAACAAAT TERM 1721 1065476 - 1065512 + r 100 -11.7 -4.56775 | opp_overlap 1065475 1065478, overlap 1065477 1065478 TCATATTTCAAAAAG AAGGCTTAAAGCCTTGT ACT ATAAGGCTTTAAGCCAC TTTTTAGCAACAAAT TERM 1722 1065477 - 1065511 + r 100 -15.2 -3.33744 | opp_overlap 1065475 1065478, overlap 1065476 1065478 CATATTTCAAAAAGA AGGCTTAAAGCCTTGT ACT ATAAGGCTTTAAGCCA CTTTTTAGCAACAAA TERM 1723 1065478 - 1065510 + r 100 -18.7 -2.60032 | opp_overlap 1065478 1065475, overlap 1065477 1065476 ATATTTCAAAAAGAA GGCTTAAAGCCTTGT ACT ATAAGGCTTTAAGCC ACTTTTTAGCAACAA TERM 1724 1065510 - 1065478 - R 100 -16.5 -4.43351 | opp_overlap 1065477 1065476 1065478, overlap 1065475 ATATTTCAAAAAGAA GGCTTAAAGCCTTGT ACT ATAAGGCTTTAAGCC ACTTTTTAGCAACAA TERM 1725 1065569 - 1065589 + r 78 -7.5 -4.20106 | AAAGGCTGAGCCTCG GGATTGAGC AGG GCCCAGTCC TTTTAAATCCAGTTT TERM 1726 1065822 - 1065833 + r 72 -5.8 -4.43477 | overlap 1065819 ATAATGAATAATCGG GCCA TCCG TGGC TTTTAATTGACTCAG TERM 1727 1066518 - 1066501 - R 77 -4.9 -5.06816 | opp_overlap 1066501 AGTTGCGAACAAAAA CTAAAAC TTTC GCTTTAG GTTTTTACAGATTAT APL_0923 1066724 - 1066530 - | hypothetical protein fdx 1067065 - 1066724 - | 2Fe-2S ferredoxin hscA 1069039 - 1067186 - | chaperone protein HscA TERM 1728 1067530 - 1067550 + g 90 -11.3 -3.64822 | opp_overlap 1067535, overlap 1067535 TAACTTCTTCGTCAG TTAAACCGT AAG ACGGTTTAA TTTGAATCGAAGCCT TERM 1729 1067535 - 1067545 + g 71 -6.8 -4.08485 | opp_overlap 1067535, overlap 1067530 TCTTCGTCAGTTAAA CCGT AAG ACGG TTTAATTTGAATCGA TERM 1730 1067664 - 1067632 - G 73 -9.1 -3.45118 | CCACTTGATAAGTAA CACGAATCGTCGCCG CAC CGGCAACCATCGGTG GAATGCCTCGTAACG TERM 1731 1068986 - 1069023 + g 73 -8.3 -3.62096 | opp_overlap 1068987, overlap 1068987 ACCGACGGCTAAACG ATGCTGATGCGGCGCAG CCGT CTGCCCCGGCTCAGCAA TTTGAAGTAATGCCA TERM 1732 1069022 - 1068987 - G 86 -11.8 -2.91695 | opp_overlap 1068986 1068987 CCGACGGCTAAACGA TGCTGATGCGGCGCAG CCGT CTGCCCCGGCTCAGCA ATTTGAAGTAATGCC TERM 1733 1068987 - 1069022 + g 83 -11.8 -2.77043 | opp_overlap 1068987, overlap 1068986 CCGACGGCTAAACGA TGCTGATGCGGCGCAG CCGT CTGCCCCGGCTCAGCA ATTTGAAGTAATGCC TERM 1734 1069031 - 1069041 + g 80 -2.6 -5.46276 | CTCAGCAATTTGAAG TAAT GCC ATTA TTTTTTATCTCTCTT APL_0926 1069790 - 1069158 - | hypothetical protein TERM 1735 1069680 - 1069668 - G 77 -10.5 -3.15544 | opp_overlap 1069668 1069666, overlap 1069652 CTGCATTCCGACTAA CGCCG CAC CGGCG TCTTCTGGATAGCTC TERM 1736 1069668 - 1069680 + g 78 -10.5 -3.254 | opp_overlap 1069652 1069668, overlap 1069666 CTGCATTCCGACTAA CGCCG CAC CGGCG TCTTCTGGATAGCTC APL_0927 1070270 - 1069818 - | hypothetical protein TERM 1737 1069989 - 1069971 - G 82 -2.4 -5.68489 | GACAATAATAAAAAA CAGCAT ATTGGTA ATGCCG ATTTTAGGTGCTAAA hscB 1070839 - 1070318 - | co-chaperone HscB TERM 1738 1070420 - 1070430 + g 71 -6.8 -4.21319 | TTGTTGCCATTGTTG CGCT TCC AGCG TTTGTTGCAGTTGCT TERM 1739 1070652 - 1070672 + g 71 -6.9 -4.128 | overlap 1070656 CGTAGAATCGGATCT TTAAGCGTT TGT AACGCTGAA TTTATATCTGCCGAT iscA 1071172 - 1070849 - | iron-binding protein IscA nifU 1071697 - 1071314 - | scaffold protein TERM 1740 1071415 - 1071428 + g 70 -3.7 -4.8622 | GTAATTCCAATTCTT CTGCG ATGT CGCTG TTTTTAATTGCGCCC TERM 1741 1071514 - 1071533 + g 74 -10 -3.10796 | opp_overlap 1071508 TTGCAGAACCGCAAC CGTACGCT TTAA AGCGTGCG TCTTCAATAATACCC iscS 1073056 - 1071830 - | cysteine desulfurase APL_0932 1073563 - 1073111 - | putative HTH-type transcriptional regulator TERM 1742 1073643 - 1073625 - H 76 -9.6 -2.89742 | opp_overlap 1073623 GTGAATTTTGATATA CCTGACTG TTA CAGTCAAG AATTTTACACTTATC TERM 1743 1074006 - 1073989 - H 75 -4.9 -4.99861 | overlap 1073980 1073991 TAGCAATCATAAAAA TATGAAC GACA GTTCACA AAAATGGCCTTTTAT ompP1 1074053 - 1075444 + | putative outer membrane protein precursor TERM 1744 1075504 - 1075482 - f 91 -12.1 -3.67517 | opp_overlap 1075482 TACGAAGATGCCAAA GGCGTGTAA ACTGA TTACACGCC TTTTTATTTACTTTA TERM 1745 1075482 - 1075504 + F 100 -12.1 -5.41941 | opp_overlap 1075482 TACGAAGATGCCAAA GGCGTGTAA ACTGA TTACACGCC TTTTTATTTACTTTA ogt 1075530 - 1076093 + | methylated-DNA--protein-cysteine S-methyltransferase TERM 1746 1076106 - 1076079 - T 83 -4.8 -5.56264 | opp_overlap 1076079 1076080, overlap 1076080 CCGAAACATAAAAAA TGGGATAAAGCC TAAA GACGTTATCCCC TTTCGATTAGTAATT TERM 1747 1076105 - 1076080 - T 79 -8.3 -3.92132 | opp_overlap 1076079 1076080, overlap 1076079 CGAAACATAAAAAAT GGGATAAAGCC TAAA GACGTTATCCC CTTTCGATTAGTAAT APL_0935 1077963 - 1076113 - | aerobic respiration control sensor protein TERM 1748 1077424 - 1077437 + g 89 -6.7 -5.28176 | overlap 1077434 TCTAAACAACTCGAC TCGAC GGCT GTCGA TTTTTTCTAAATCGA TERM 1749 1077984 - 1078012 + r 72 -6.2 -4.35604 | opp_overlap 1077984, overlap 1077979 CCCCTTAAAAGAAAA TCCTTTCTAT CGTTTAAAA ATAGAAAGGA TTTATTATAGCTTAA TERM 1750 1078012 - 1077984 - R 90 -8.3 -5.07652 | opp_overlap 1077979 1077984 CCCCTTAAAAGAAAA TCCTTTCTATCGT TTA AAAATAGAAAGGA TTTATTATAGCTTAA APL_0936 1078932 - 1078069 - | hypothetical protein TERM 1751 1078127 - 1078139 + g 89 -3.5 -5.63517 | AAGACACCTAAGTAG TTAAT TTT ATTAA TTTTTTCTTTAAAAA TERM 1752 1079041 - 1078994 - R 95 -15 -3.08912 | opp_overlap 1078995 1078998, overlap 1078998 1079018 TATGAGATAGATAGA TCAAGCGGTCGGATCTGTGCAA AATT TTGCAAAAATACGACCGCTTGT TATGCTCTATTTACG TERM 1753 1078995 - 1079040 + r 100 -16.3 -3.54662 | opp_overlap 1078994 1078998 1079018, overlap 1078998 ATGAGATAGATAGAT CAAGCGGTCGGATCTGTGCAA AATT TTGCAAAAATACGACCGCTTG TTATGCTCTATTTAC TERM 1754 1078998 - 1079037 + r 91 -12.2 -3.88777 | opp_overlap 1078998 1078994 1079018, overlap 1078995 AGATAGATAGATCAA GCGGTCGGATCTGTGCAA AATT TTGCAAAAATACGACCGC TTGTTATGCTCTATT TERM 1755 1079037 - 1078998 - R 100 -14.4 -3.37057 | opp_overlap 1078995 1078998, overlap 1078994 1079018 AGATAGATAGATCAA GCGGTCGGATCTGTGCAA AATT TTGCAAAAATACGACCGC TTGTTATGCTCTATT APL_0937 1079590 - 1079048 - | hypothetical protein bioD 1080224 - 1079580 - | dithiobiotin synthetase bioC 1080994 - 1080224 - | biotin synthesis protein APL_0940 1081641 - 1080982 - | hypothetical protein TERM 1756 1081047 - 1081063 + g 100 -8.7 -5.0916 | opp_overlap 1081047, overlap 1081035 GCTCACCTTTAGATA GGTGTGT CAT ACGCACC TTTTTATCTTGCCAA bioF 1082814 - 1081651 - | 8-amino-7-oxononanoate synthase TERM 1757 1081972 - 1081957 - G 76 -2.5 -5.27335 | CCGCTCAAATAAAAA TGCCG TCCACG CGACA TTTAGTGGCGGTAAT TERM 1758 1082117 - 1082105 - G 87 -6.3 -5.1675 | GTACCGACTAAAAAA TCGAT CTC ATCGA TACAGCCTAATACTT bioA 1084139 - 1082841 - | adenosylmethionine--8-amino-7-oxononanoate transaminase APL_0943 1084230 - 1085174 + | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase TERM 1759 1085233 - 1085185 - T 100 -11.9 -5.15381 | opp_overlap 1085185 1085180 1085203 AATAGACCTAAAAAA GCGGTCATATTTCTTCCTTTTTT ACA AAATTTTGAAGAAATATGACCGC TTAACTTTATACGGA TERM 1760 1085185 - 1085233 + T 89 -11.9 -3.32997 | opp_overlap 1085185, overlap 1085180 1085203 AATAGACCTAAAAAA GCGGTCATATTTCTTCCTTTTTT ACA AAATTTTGAAGAAATATGACCGC TTAACTTTATACGGA greA 1085732 - 1085256 - | transcription elongation factor GreA TERM 1761 1085580 - 1085598 + g 81 -5.2 -5.10933 | overlap 1085575 1085583 1085594 ACCTTGCTGTTCACG TGCCGCGT GGT ATTCGGCA TTTTCTTTTAAATCG TERM 1762 1085990 - 1086002 + G 73 -2.7 -5.0916 | CAAATTATTACACAA TATCA AAG TGATG TTTTTATGTTGCCGG TERM 1763 1086145 - 1086131 - g 74 -4.2 -4.91987 | AACGGAATAATAAAA GGTGAT TTA ATCGCC AAATTCACAGGTGAT dacB 1085816 - 1087258 + | D-alanyl-D-alanine carboxypeptidase/endopeptidase TERM 1764 1087264 - 1087294 + T 89 -11.3 -3.36968 | opp_overlap 1087270, overlap 1087265 1087270 TAACGAATAATTTCC CTAAAAGGCACTC CTGAC GAGTGCCTTTTAC TTATGCAATTAAATC TERM 1765 1087265 - 1087293 + T 95 -14.8 -2.6186 | opp_overlap 1087270, overlap 1087264 1087270 AACGAATAATTTCCC TAAAAGGCACTC CTGAC GAGTGCCTTTTA CTTATGCAATTAAAT TERM 1766 1087288 - 1087270 - T 100 -10.3 -4.10007 | opp_overlap 1087265 1087264 1087270 ATAATTTCCCTAAAA GGCACTC CTGAC GAGTGCC TTTTACTTATGCAAT TERM 1767 1087270 - 1087288 + T 100 -10.3 -4.49389 | opp_overlap 1087270, overlap 1087265 1087264 ATAATTTCCCTAAAA GGCACTC CTGAC GAGTGCC TTTTACTTATGCAAT APL_0946 1087564 - 1087295 - | hypothetical protein TERM 1768 1087699 - 1087719 + r 100 -12.7 -4.65263 | CAGTAAAATTTTTGA TGCCCTTAA TCG TTAAGGGCA TTTATTTTGGCAAAT APL_0947 1089004 - 1087883 - | transposase TERM 1769 1089082 - 1089061 - H 75 -8.7 -3.48985 | overlap 1089059 AGACATAAAAAATCA CCCACCTGA ATTT TCAGGTCGG CTCAAAGCGTTTTGC TERM 1770 1089340 - 1089321 - H 100 -10.8 -5.63517 | opp_overlap 1089297 1089321 1089325 CTGTCAAATAAAAAA GCAACTCA TTGC TGAGTTGC TGTGAGAAAGCTAAT TERM 1771 1089404 - 1089375 - H 89 -9.5 -4.1523 | gap 1, overlap 1089377 1089398 TCGAATTATAAACAA TA-GGAGTTCATCT AAA AGACGAACTCCATA AATGGGGATAATTAT TERM 1772 1089401 - 1089377 - H 100 -13.7 -3.66489 | overlap 1089375 1089398 GAATTATAAACAATA GGAGTTCATCT AAA AGACGAACTCC ATAAATGGGGATAAT TERM 1773 1090813 - 1090795 - g 78 -7.4 -4.48333 | ACACATCAAGGAAAA GTGTGCTG TGG CAGAACAC CGATGGCAACATTAC APL_0948 1089835 - 1090875 + | transposase APL_0949 1091474 - 1090914 - | hypothetical protein TERM 1774 1091048 - 1091027 - G 71 -4.6 -4.59773 | opp_overlap 1091013 1091027 1091024 TTTCATTTTCAAAAA GAATTAAA TAATTG TTTAATTC TTCTTTATTTAGCTC APL_0950 1092502 - 1091939 - | hypothetical protein TERM 1775 1092548 - 1092528 - R 93 -12.7 -3.36648 | opp_overlap 1092528 1092523 TAATATAGTCCACAA CCACGTATT AGG AATACGTGG TTCATATTTAAAATC TERM 1776 1092528 - 1092548 + r 93 -12.7 -3.46285 | opp_overlap 1092528, overlap 1092523 TAATATAGTCCACAA CCACGTATT AGG AATACGTGG TTCATATTTAAAATC APL_0951 1092964 - 1092656 - | hypothetical protein TERM 1777 1093158 - 1093124 - g 72 -7.9 -3.82261 | opp_overlap 1093123, overlap 1093120 CTGCAAGAAAATTAA GTCCGCTTAAGATAG CTCGT CTATCTGATGCAGAC GCATTTTCTTTATTG APL_0952 1093033 - 1094115 + | putative transposase APL_0953 1094115 - 1094549 + | hypothetical protein APL_0954 1094939 - 1094550 - | hypothetical protein TERM 1778 1095044 - 1095003 - R 77 -3.1 -5.5353 | gap 1 GAGAGCAAGAAAAAA TGTAGCAGAAACACTAA-AT TAA ATCTTTGTGCAACTGCTACA TAATACCGGAAAATT apxIIB 1095553 - 1094981 - | leukotoxin translocation ATP-binding protein LktB (apxIIB) TERM 1779 1095606 - 1095573 - R 100 -9.1 -5.40072 | opp_overlap 1095573 1095594 TCTCCTTTAAAAAAA TAACAATCCTATAAT TTAC ACCATAGGATTGCTA TGATTTGAATATTAA apxIIA 1098488 - 1095618 - | RTX-II toxin determinant A TERM 1780 1096999 - 1097011 + g 74 -6.3 -4.49337 | GCATCCACATAAGCT TTTCC ACT GGAAA TTTTATCCGTTCTAC APL_0957 1100414 - 1099185 - | hypothetical protein TERM 1781 1099227 - 1099245 + g 86 -6 -5.30348 | TTGTACCAACGTTCT GTAATGGT TAA GCCATTGC TTTTTGTTGTTGGGT TERM 1782 1099658 - 1099670 + g 82 -3.4 -5.46706 | opp_overlap 1099658 TCACCGAAATAAAAT CAAC AAGCG GTTG TTTTTGTTTTGAGAT TERM 1783 1100662 - 1100703 + H 100 -14.6 -4.04579 | gap 1, opp_overlap 1100664 1100665 1100668, overlap 1100653 1100665 AGTTGATTTTAGGAA AATTTATGTAGGGGCGGGG TTTAT CCCCGCCCCTACG-AAATA TTTAATGTTTGTGCA TERM 1784 1100701 - 1100664 - H 100 -15 -4.26903 | gap 1, opp_overlap 1100662 1100665, overlap 1100665 1100668 TTGATTTTAGGAAAA TTTATGTAGGGGCGGGG TTTAT CCCCGCCCCTACG-AAA TATTTAATGTTTGTG TERM 1785 1100701 - 1100665 - H 100 -16.6 -3.1582 | opp_overlap 1100665 1100662, overlap 1100664 1100668 TGATTTTAGGAAAAT TTATGTAGGGGCGGGG TTTAT CCCCGCCCCTACGAAA TATTTAATGTTTGTG TERM 1786 1100665 - 1100701 + H 100 -18.8 -3.60737 | opp_overlap 1100664 1100665 1100668, overlap 1100662 TGATTTTAGGAAAAT TTATGTAGGGGCGGGG TTTAT CCCCGCCCCTACGAAA TATTTAATGTTTGTG TERM 1787 1100698 - 1100668 - H 100 -18.3 -2.77781 | opp_overlap 1100665 1100662, overlap 1100664 1100665 TTTTAGGAAAATTTA TGTAGGGGCGGGG TTTAT CCCCGCCCCTACG AAATATTTAATGTTT TERM 1788 1100785 - 1100774 - H 79 -4.4 -5.26875 | opp_overlap 1100774 TTGCTAATGAAAAAA GCAA ACGT TTGC GTTATAATAGAAAAG purH 1100837 - 1102426 + | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase TERM 1789 1102540 - 1102572 + T 80 -10.2 -3.07443 | gap 1, opp_overlap 1102535 1102549, overlap 1102549 GTTTAATGTAGCCTT TATAAAAAAGCGAGA TTTC TCTCGCTTTTTT-TA TTCAATCGCATGTAA TERM 1790 1102549 - 1102564 + T 100 -9 -5.8187 | opp_overlap 1102535 1102549, overlap 1102540 AGCCTTTATAAAAAA GCGAGA TTTC TCTCGC TTTTTTTATTCAATC TERM 1791 1102564 - 1102549 - T 95 -9 -5.24531 | opp_overlap 1102549 1102540, overlap 1102535 AGCCTTTATAAAAAA GCGAGA TTTC TCTCGC TTTTTTTATTCAATC APL_0959 1111811 - 1104021 - | hemagglutinin/hemolysin-like protein TERM 1792 1105105 - 1105117 + g 72 -7.7 -3.81137 | AGTACCTTTTGTGCC TCCGA CTC TCGGA TTTGAATATTTGCCG TERM 1793 1105450 - 1105460 + g 79 -6.8 -4.74504 | overlap 1105454 AATCGGTTATATCCT GCTG CTT CAGC TTTTTCAGTTGAAGT TERM 1794 1107754 - 1107764 + g 73 -2.6 -5.10077 | opp_overlap 1107761 AAGCCTATGCCGACT TTTA AAT TAAA TTTTTTAGCGTATTT TERM 1795 1109467 - 1109449 - G 71 -4.6 -4.68724 | TTATTTAACACAAAA CTGTCTTT CAA AAAGATAG AAAGATCTCCGGCCG TERM 1796 1110461 - 1110473 + g 75 -9.1 -3.71924 | CTTGTGCCGAGAGCC GGCGA GTT TCGCC TTGTTGCGTACTTTG TERM 1797 1111707 - 1111659 - G 90 -11.1 -3.92716 | opp_overlap 1111664, overlap 1111664 GCAAAATAAGCTAAA GGTAAGCGGTCTGATTTTGCAAA TTT TCTGCGAAATCACACCGCTTGTC ATACCCGCTTCATTT TERM 1798 1111702 - 1111664 - G 100 -14 -3.31183 | opp_overlap 1111664, overlap 1111659 ATAAGCTAAAGGTAA GCGGTCTGATTTTGCAAA TTT TCTGCGAAATCACACCGC TTGTCATACCCGCTT TERM 1799 1111664 - 1111702 + g 100 -14 -3.40899 | opp_overlap 1111659 1111664 ATAAGCTAAAGGTAA GCGGTCTGATTTTGCAAA TTT TCTGCGAAATCACACCGC TTGTCATACCCGCTT TERM 1800 1113091 - 1113081 - R 71 -6.8 -4.17089 | TGTAAAGGGGTAAAA CGAG GTA CTCG ACCGTTATCCACCAC TERM 1801 1113554 - 1113564 + r 72 -8.2 -3.39844 | opp_overlap 1113553, overlap 1113552 CGTTTCTTTGAAAGG CGGC GGA GCCG TATTTCCCGTATGGG TERM 1802 1113740 - 1113770 + r 77 -9.2 -3.18582 | gap 1, opp_overlap 1113740 ATATATAAAATAAAA GAGTCGATCACTA TCATTC TAG-GATCGACTC TTAATACATAAAATA TERM 1803 1113770 - 1113740 - R 100 -9.2 -5.24647 | gap 1, opp_overlap 1113740 ATATATAAAATAAAA GAGTCGATCACTA TCATTC TAG-GATCGACTC TTAATACATAAAATA ostA 1116150 - 1113814 - | organic solvent tolerance protein TERM 1804 1115674 - 1115691 + g 82 -8.5 -4.3953 | opp_overlap 1115688, overlap 1115663 ACAGGCGGTAAAGGT CGCATTT TTTA AAATGCG TTTATTGTGATTAAA hemN 1117574 - 1116207 - | coproporphyrinogen III oxidase APL_0964 1118032 - 1117604 - | hypothetical protein TERM 1805 1117881 - 1117849 - G 77 -10.7 -2.89569 | opp_overlap 1117849 1117850, overlap 1117846 1117842 GTTTTAAACGAAGTA CGCCTTCCGAAAAAT CAC ATTGTTCGGAAAGCA TTGCTCTTGTAATGA TERM 1806 1117850 - 1117880 + g 71 -9.8 -2.6544 | opp_overlap 1117849 1117846 1117842, overlap 1117849 TTTTAAACGAAGTAC GCCTTCCGAAAAAT CAC ATTGTTCGGAAAGC ATTGCTCTTGTAATG APL_0965 1118665 - 1118087 - | hypothetical protein TERM 1807 1118204 - 1118215 + g 74 -4.4 -4.93696 | opp_overlap 1118204, overlap 1118198 1118194 GATACGATCCAAACA TTCG TCTA CGAA TTTTTGATCTTTCGC TERM 1808 1118798 - 1118745 - R 100 -11.9 -4.70353 | opp_overlap 1118761 1118767 1118793, overlap 1118789 GAGAAGAAATGAAAA TAGCGGTCGGATTCATTGAGAATTT TACA AAAATCTCGTTAAATTCGACCGCTA TCGATGATGACGGAT APL_0966 1120472 - 1118814 - | hypothetical protein TERM 1809 1120563 - 1120550 - H 71 -6.7 -4.21631 | AACTGATTCAAGAAA TTCGC AATT GCGAA GCGGATAATATGATC TERM 1810 1120598 - 1120610 + H 75 -4.9 -5.01535 | TCAAAAAATTTTTAA CTTAT ATG ATAAG TTTTTCTAATTCTAA TERM 1811 1120973 - 1120988 + G 70 -2.5 -4.91712 | overlap 1120971 CCTTCTTCTCATCCG TCGGT TTATCC GCCGA TTTTTCTCGCTTAAA gltS 1120735 - 1121952 + | sodium/glutamate symport carrier protein TERM 1812 1122002 - 1121970 - T 83 -6.9 -4.78326 | opp_overlap 1121972 1121975, overlap 1121975 GTTTAAACAAATAAA GCAAAGGGGCAACCG TTA CGGTTTCCCCTTCTT TGTTTTATTACTTAA TERM 1813 1121972 - 1122000 + T 100 -11.7 -4.91657 | opp_overlap 1121970 1121975, overlap 1121975 TTAAACAAATAAAGC AAAGGGGCAACCG TTA CGGTTTCCCCTTC TTTGTTTTATTACTT TERM 1814 1121997 - 1121975 - T 100 -13.4 -4.30977 | opp_overlap 1121975 1121972, overlap 1121970 AACAAATAAAGCAAA GGGGCAACCG TTA CGGTTTCCCC TTCTTTGTTTTATTA TERM 1815 1121975 - 1121997 + T 100 -13.4 -4.51933 | opp_overlap 1121970 1121975, overlap 1121972 AACAAATAAAGCAAA GGGGCAACCG TTA CGGTTTCCCC TTCTTTGTTTTATTA APL_0968 1122399 - 1122022 - | hypothetical protein TERM 1816 1122448 - 1122485 + r 90 -11.5 -3.60348 | opp_overlap 1122448 TATAGCGGAAAACAA GCGGTTAAATTGACAAA ATTT TTTGCAAATTTAACCGC TTCTCTGATCTTAGC TERM 1817 1122485 - 1122448 - R 100 -13.7 -4.20817 | opp_overlap 1122448 TATAGCGGAAAACAA GCGGTTAAATTGACAAA ATTT TTTGCAAATTTAACCGC TTCTCTGATCTTAGC glnE 1125375 - 1122496 - | glutamate-ammonia-ligase adenylyltransferase TERM 1818 1125406 - 1125433 + r 81 -8.4 -4.08767 | opp_overlap 1125408, overlap 1125408 AAATCGGACGAGAAA AAGGCACAAACG GAAT CGCTTGTGCCTG TTTTAACAAAATAAG TERM 1819 1125431 - 1125408 - R 100 -13.2 -4.91511 | opp_overlap 1125408 1125406 ATCGGACGAGAAAAA GGCACAAACG GAAT CGCTTGTGCC TGTTTTAACAAAATA TERM 1820 1125408 - 1125431 + r 89 -11 -3.6422 | opp_overlap 1125408, overlap 1125406 ATCGGACGAGAAAAA GGCACAAACG GAAT CGCTTGTGCC TGTTTTAACAAAATA APL_0970 1125716 - 1125450 - | hypothetical protein APL_0971 1126234 - 1125743 - | putative acyl CoA thioester hydrolase ispZ 1126772 - 1126221 - | intracellular septation protein A APL_0973 1127511 - 1126774 - | hypothetical protein APL_0974 1127670 - 1128104 + | hypothetical protein TERM 1821 1128363 - 1128381 + G 75 -8.2 -3.74158 | GTTTACGCCGTAATG TCGGTAAT GCG ATTGCCGA TTTCAATATGATTGA TERM 1822 1128543 - 1128530 - g 73 -5.9 -4.50988 | overlap 1128531 TTAGACCAAAAACAA CCCGG CTTT CCGGA ACATATTTTGCCTGA APL_0975 1128272 - 1129228 + | hypothetical protein TERM 1823 1129257 - 1129236 - f 90 -11.7 -3.72051 | opp_overlap 1129236 TTCAATAATCCTAAA GAGCAAACT TTTA AGTTTGCTC TTTTTTCTATAACTT TERM 1824 1129236 - 1129257 + F 100 -11.7 -5.38951 | opp_overlap 1129236 TTCAATAATCCTAAA GAGCAAACT TTTA AGTTTGCTC TTTTTTCTATAACTT TERM 1825 1129663 - 1129650 - g 70 -9.5 -2.78395 | opp_overlap 1129648, overlap 1129647 AACCGCGATGAACTA CGCCG TACT CGGCG CATTTGCCGTAGCCT TERM 1826 1130069 - 1130083 + G 74 -10 -3.16093 | overlap 1130067 CTAAAGCGATGGCGG TACCGG TTG CCGGTA TGATTTTAGGTTTAC TERM 1827 1130739 - 1130751 + G 70 -7.7 -3.71321 | CCATATTTGGGATTC TGTCG TAC CGACA TTCTTACACTTTAAT APL_0976 1129435 - 1130811 + | hypothetical protein xthA 1130902 - 1131705 + | exonuclease III TERM 1828 1131765 - 1131710 - T 93 -10.3 -4.01603 | gap 2, opp_overlap 1131709 1131710 1131713, overlap 1131713 TATTCAAATAGCAAA CAAGCGGTCAAATTTAGCAAAAAATTT ACAA AAAATTCTT--TAAATTTGACCGCTTG TCTTTAATCTTTCGG TERM 1829 1131710 - 1131765 + T 80 -9.4 -3.5913 | gap 1, opp_overlap 1131710 1131713, overlap 1131709 1131713 TATTCAAATAGCAAA CAAGCGGTCAAATTTAGCAAAAAATTT ACA AAAAATTCT-TTAAATTTGACCGCTTG TCTTTAATCTTTCGG ilvY 1132653 - 1131769 - | DNA-binding transcriptional regulator IlvY TERM 1830 1132263 - 1132280 + g 86 -10.5 -3.79162 | overlap 1132260 CCGTATGCACTGCTT GCGCCGG ATCG CCGGTGC TTAGTTTTATCTCCA lbgB 1133694 - 1132654 - | putative D-glycero-D-manno-heptosyl transferase lbgA 1134377 - 1133736 - | putative LPS biosynthesis protein TERM 1831 1133966 - 1133978 + g 76 -7.7 -4.21194 | overlap 1133952 GTGGACGTGTTATCG GCCAA TAT TTGGC TTTTCCGTGGTCAAA TERM 1832 1135327 - 1135349 + G 83 -9.2 -3.91959 | GCGGTGGTGTTCACA TGGCTTGC GCTTATG GCAAGCCA TTATTATCATTCTAT APL_0981 1134486 - 1135547 + | hypothetical protein TERM 1833 1135596 - 1135565 - T 100 -14.6 -4.24948 | opp_overlap 1135568 1135573, overlap 1135573 CCAGGACATTTAAAA CAACAAAACCCCGC ATTG GCGGGGTTTTATTA ATAATTCGAAAATTA TERM 1834 1135568 - 1135593 + T 89 -11.9 -3.27298 | opp_overlap 1135565 1135573, overlap 1135573 GGACATTTAAAACAA CAAAACCCCGC ATTG GCGGGGTTTTA TTAATAATTCGAAAA TERM 1835 1135573 - 1135588 + T 100 -11.8 -4.75219 | opp_overlap 1135565 1135573, overlap 1135568 TTTAAAACAACAAAA CCCCGC ATTG GCGGGG TTTTATTAATAATTC TERM 1836 1135588 - 1135573 - T 100 -11.8 -5.093 | opp_overlap 1135573 1135568, overlap 1135565 TTTAAAACAACAAAA CCCCGC ATTG GCGGGG TTTTATTAATAATTC rpmE 1135821 - 1135609 - | 50S ribosomal protein L31 TERM 1837 1136074 - 1136091 + H 73 -4.2 -4.87893 | ACTTTCTCATCTTTT TTGTGA AGAAGA TCACAA TTTTTACTTGAGATT TERM 1838 1136224 - 1136238 + G 77 -8.6 -3.9534 | opp_overlap 1136221 GAACGTAAAGTATTA GCGAAT GCA ATTCGC TTTCTAAGTATGGAT TERM 1839 1136374 - 1136341 - g 76 -8.1 -4.09685 | opp_overlap 1136363 1136366 CGCGATTTTTTAAAA CACAATCCGACCAAT CCTA AGTGGGCGGATCGCG ACCGTTTCGTACTTT tktA 1136203 - 1138209 + | transketolase TERM 1840 1138234 - 1138251 + F 100 -11.3 -5.2197 | opp_overlap 1138234 GACATTAAAGACAAA GGCGAGA AGAT TCTCGCC TTTTTAATTTTTGTA TERM 1841 1138251 - 1138234 - f 100 -11.3 -4.3851 | opp_overlap 1138234 GACATTAAAGACAAA GGCGAGA AGAT TCTCGCC TTTTTAATTTTTGTA APL_0984 1138339 - 1138848 + | putative transposase TERM 1842 1139017 - 1139035 + GF 71 -2.4 -5.09225 | ACGGCTATCGTCGTA TTACGTTA AAG TTACGTGA TTTTTTGGGTGCGAT APL_0985 1138860 - 1139195 + | transposase TERM 1843 1139629 - 1139661 + GT 79 -9.9 -3.17392 | opp_overlap 1139629 CAAGTGAAATTAAAA GGACTGAGCCTTGTA CAA TACAGAACTCAGTCC TTAAATTAAACAGTC TERM 1844 1139661 - 1139629 - gT 100 -12.1 -4.5852 | opp_overlap 1139629 CAAGTGAAATTAAAA GGACTGAGCCTTGTA CAA TACAGAACTCAGTCC TTAAATTAAACAGTC APL_0986 1139161 - 1139670 + | transposase-like protein htpG 1141606 - 1139729 - | heat shock protein 90 TERM 1845 1141170 - 1141182 + g 72 -6.2 -4.24606 | opp_overlap 1141153 ACGGCTTGTGTTTCG CCCG CCGCA CGGG TTTTCACTGTCACTT TERM 1846 1141652 - 1141632 - H 72 -2.5 -5.31456 | overlap 1141635 TTAATTTACAAAAAA TAAGCGG AATTTCA CCGCTTG CAAATGTATTAGTAA TERM 1847 1141649 - 1141635 - H 70 -4.2 -4.73105 | overlap 1141632 ATTTACAAAAAATAA GCGG AATTTCA CCGC TTGCAAATGTATTAG TERM 1848 1142718 - 1142704 - g 70 -2.9 -5.00884 | ATCTGGTCGAAAAAA GATTA TCCGT TAATC GAAGTGGGCGTGATG hktE 1141834 - 1143360 + | catalase APL_0989 1143527 - 1143706 + | transposase TERM 1849 1144055 - 1144023 - g 100 -17.9 -4.5852 | opp_overlap 1144023 CAAGTGAAATTAAAA GGACTGAGCCCTGTA CAA TACAGAACTCAGTCC TTAAATTAAACAGTC TERM 1850 1144023 - 1144055 + G 100 -13.5 -3.17392 | opp_overlap 1144023 CAAGTGAAATTAAAA GGACTGAGCCCTGTA CAA TACAGAACTCAGTCC TTAAATTAAACAGTC APL_0990 1143726 - 1144064 + | transposase APL_0991 1144177 - 1145256 + | hypothetical protein TERM 1851 1145275 - 1145296 + F 83 -6.6 -4.92828 | opp_overlap 1145275 TAATTTTTAATCTAA CCCTTGAA TCTATT TTCAGGGG TTTATTTTTACATTT nrdA 1145469 - 1147739 + | ribonucleotide-diphosphate reductase subunit alpha TERM 1852 1147820 - 1147808 - f 74 -9.1 -3.11291 | CGGAGAATTTTAACA GCCAC AGC GTGGC TCACTCAATCGAAGG TERM 1853 1147872 - 1147849 - f 72 -8.1 -3.44051 | GGCTGATGATCATAA CCACGTACG GCTTGT CGTGCGTGG GCTACAAGCGGTTGA TERM 1854 1147990 - 1148012 + F 80 -10.5 -3.02371 | opp_overlap 1147987, overlap 1147987 CGAAGAAAAATCTGT CCCTCTCCC ACAAG GGGCGAGGG TAATTATTTAAAAAG nrdB 1148036 - 1149166 + | ribonucleotide-diphosphate reductase subunit beta TERM 1855 1149229 - 1149174 - f 82 -5.6 -5.29846 | gap 1, opp_overlap 1149177, overlap 1149168 AACTTTAAAGAAAAA CAAGCGGTCG-CTTTTCCATTATCTTT TGC AAAAAAGAGGGAAAATTCGACCGCTTA CTTAAATCGAAATCC galT 1149428 - 1150477 + | galactose-1-phosphate uridylyltransferase galK 1150505 - 1151659 + | galactokinase TERM 1856 1151670 - 1151702 + F 100 -14.4 -3.53761 | gap 1, opp_overlap 1151677, overlap 1151673 1151677 1151698 TTTAATCGTTCATCT GC-AGAAATCACGGA AATT TCCGTGATTTCTTGC TTTCGGAGCAAGTTA TERM 1857 1151673 - 1151698 + F 100 -14.9 -3.51232 | opp_overlap 1151677, overlap 1151670 1151677 AATCGTTCATCTGCA GAAATCACGGA AATT TCCGTGATTTC TTGCTTTCGGAGCAA TERM 1858 1151677 - 1151694 + F 100 -9.9 -4.39696 | opp_overlap 1151677, overlap 1151673 1151670 GTTCATCTGCAGAAA TCACGGA AATT TCCGTGA TTTCTTGCTTTCGGA TERM 1859 1151694 - 1151677 - f 83 -9.9 -3.87815 | opp_overlap 1151677 1151673 1151670 GTTCATCTGCAGAAA TCACGGA AATT TCCGTGA TTTCTTGCTTTCGGA galM 1151717 - 1152685 + | aldose 1-epimerase TERM 1860 1152816 - 1152804 - g 83 -9.1 -4.08823 | ATCAACAGAATGAAA CCGCT TTA AGCGG TAAGCGCGAACAATC TERM 1861 1154011 - 1153997 - g 73 -3.5 -5.00616 | opp_overlap 1153983 CCGCTGTTCAAAAAA GCGAT TTTAG ACCGC CAACAAGCCAATGTG lacZ 1152710 - 1155730 + | beta-galactosidase TERM 1862 1155839 - 1155802 - T 100 -10.7 -4.3467 | opp_overlap 1155807, overlap 1155807 ATTCTTACACTAAAA TCAAATCGGCACAGTTC AAAA AAACTGTGCCGATTTCT TTCGTATGTTATAAA TERM 1863 1155807 - 1155834 + T 100 -14.3 -4.56113 | opp_overlap 1155802 1155807 TACACTAAAATCAAA TCGGCACAGTT CAAAAA AACTGTGCCGA TTTCTTTCGTATGTT TERM 1864 1155834 - 1155807 - T 100 -15 -4.25388 | opp_overlap 1155807, overlap 1155802 TACACTAAAATCAAA TCGGCACAGTTC AAAA AAACTGTGCCGA TTTCTTTCGTATGTT apxIVA 1161703 - 1155848 - | RTX toxin protein TERM 1865 1159581 - 1159592 + g 71 -2.2 -5.14163 | GCAGAAATACTGCCG TCGG AAAG CTGA TTTTTATTACTAAAT TERM 1866 1160811 - 1160832 + g 70 -2.9 -4.91712 | overlap 1160814 TCAATCGTAACTTCT TTGCCCGCA ATCC TACGGGTGA TTTTTGTGCCTTCAA TERM 1867 1161158 - 1161178 + g 84 -5.5 -5.27923 | AGACCAAAAGCCACC GACGAAA TCAAAAT TTTCGTC TTTTTTGTACGGTTC APL_0999 1162208 - 1161732 - | hypothetical protein TERM 1868 1162320 - 1162363 + r 100 -15.6 -4.55544 | opp_overlap 1162323, overlap 1162323 AATCGTACTAATAAA AAAGCGGTAGAATTTGCA ACTTTTTC TGCAAATTCTACCGCTTG TTTTCCTTCTGTGTT TERM 1869 1162323 - 1162360 + r 100 -17.3 -4.36586 | opp_overlap 1162323, overlap 1162320 CGTACTAATAAAAAA GCGGTAGAATTTGCA ACTTTTTC TGCAAATTCTACCGC TTGTTTTCCTTCTGT TERM 1870 1162360 - 1162323 - R 100 -18 -5.5112 | opp_overlap 1162320 1162323 CGTACTAATAAAAAA GCGGTAGAATTTGCAA CTTTTT CTGCAAATTCTACCGC TTGTTTTCCTTCTGT mrp 1163502 - 1162405 - | putative ATPase APL_1001 1165056 - 1163506 - | putative binding protein TERM 1871 1164677 - 1164687 + g 73 -8.2 -3.66178 | AACACGATATCTTGT GCGG TAA CCGC TTTACCGTTAGACCA APL_1002 1165724 - 1165071 - | hypothetical protein TERM 1872 1165820 - 1165795 - R 93 -7.6 -5.60556 | opp_overlap 1165795 AAGACAAAACAAAAA CGCCTAGAAC ATATCA GTTTTAGGCG TTTTTAAATATCAAT TERM 1873 1165795 - 1165820 + r 100 -9.8 -4.71061 | opp_overlap 1165795 AAGACAAAACAAAAA CGCCTAGAAC ATATCA GTTTTAGGCG TTTTTAAATATCAAT ppiD 1167723 - 1165846 - | peptidyl-prolyl cis-trans isomerase D TERM 1874 1166905 - 1166922 + g 84 -9.9 -3.75169 | opp_overlap 1166901 CGCTAACTGAATATG GGCGAAA CGAG TTTCGCC TTTAGTCGCGTAATC nhaP 1167952 - 1169265 + | Na(+)/H(+) exchanger beta-like protein rpsO 1169387 - 1169656 + | 30S ribosomal protein S15 TERM 1875 1169696 - 1169679 - f 83 -11.3 -2.62144 | opp_overlap 1169679, overlap 1169678 1169676 TTGAAATCAGAAGAG CCGAGCT ATTT AGCTCGG TTTTTTTATAAATTC TERM 1876 1169679 - 1169696 + F 100 -11.3 -5.66684 | opp_overlap 1169678 1169676 1169679 TTGAAATCAGAAGAG CCGAGCT ATTT AGCTCGG TTTTTTTATAAATTC TERM 1877 1170153 - 1170139 - g 70 -5.6 -4.33927 | opp_overlap 1170139 1170138 AAAGATAAAATTAAA GGTGCG ATT CGTACC GATTTTATTTTGTCG APL_1006 1169734 - 1170603 + | hypothetical protein TERM 1878 1170644 - 1170621 - T 100 -11.8 -5.04385 | opp_overlap 1170621 CATACCCGCAAAAAA GCCGCTTATC TTTC GATAAACGGC TTTTTTATCGTCCGA TERM 1879 1170621 - 1170644 + T 100 -9.6 -5.31275 | opp_overlap 1170621 CATACCCGCAAAAAA GCCGCTTATC TTTC GATAAACGGC TTTTTTATCGTCCGA TERM 1880 1170655 - 1170669 + T 70 -4.2 -4.74103 | ACGGCTTTTTTATCG TCCGAA TTA TACGGA TTTTTCAATTAACGC hemY 1171911 - 1170661 - | HemY-like protein hemX 1173263 - 1171923 - | putative uroporphyrin-III C-methyltransferase TERM 1881 1172732 - 1172722 - G 88 -6.8 -5.14563 | opp_overlap 1172722 TTGTTGAGTAAAAAA TCCG CAT CGGA TAATTTCCAAACAAC hemD 1174037 - 1173273 - | putative uroporphyrinogen-III synthase hemC 1174975 - 1174046 - | porphobilinogen deaminase TERM 1882 1175567 - 1175583 + G 71 -10.1 -2.62616 | opp_overlap 1175566 1175567, overlap 1175569 CGGTATTACCGAAAT CGCCGAC CCT GTCGGTG TCGTATGCGGCATAA TERM 1883 1176265 - 1176248 - g 70 -2.7 -4.91852 | GCCACCAAAAACAAA CATCCTA CTTG CAGAATG TGCGTTTGTCGGTGA adh2 1175244 - 1177859 + | bifunctional acetaldehyde-CoA/alcohol dehydrogenase TERM 1884 1177913 - 1177932 + T 100 -12.2 -5.69023 | opp_overlap 1177913 GATGAAATGTACCAA GGGCTAAC AAAA GTTAGCCC TTTTTTTCATATTTT TERM 1885 1177932 - 1177913 - T 89 -12.2 -3.25802 | opp_overlap 1177913 GATGAAATGTACCAA GGGCTAAC AAAA GTTAGCCC TTTTTTTCATATTTT TERM 1886 1177980 - 1178005 + T 85 -11.9 -3.14344 | opp_overlap 1177982, overlap 1177982 GATATAATATAAAAA AACCTCCGAGA AATT TCTCGGAGGTC TTAATGAACAAACTA TERM 1887 1177982 - 1178003 + T 95 -14.5 -3.13403 | opp_overlap 1177982, overlap 1177980 TATAATATAAAAAAA CCTCCGAGA AATT TCTCGGAGG TCTTAATGAACAAAC TERM 1888 1178003 - 1177982 - T 100 -14.5 -5.84432 | opp_overlap 1177980 1177982 TATAATATAAAAAAA CCTCCGAGA AATT TCTCGGAGG TCTTAATGAACAAAC groEL 1179676 - 1178033 - | 60 kDa chaperonin TERM 1889 1179045 - 1179055 + g 82 -8.2 -4.25056 | TCTAATTCAACCGTA CCGG CTT CCGG TTTGTTGATGAAGTA groES 1180030 - 1179740 - | 10 kDa chaperonin TERM 1890 1180212 - 1180187 - R 100 -14.1 -5.71712 | opp_overlap 1180187 TTTTAGACAAAAAAA TCCTCCGAGCT TTTC AGCTCAGAGGA TTTGTAAAGTAATAC TERM 1891 1180187 - 1180212 + r 95 -11.9 -3.90318 | opp_overlap 1180187 TTTTAGACAAAAAAA TCCTCCGAGCT TTTC AGCTCAGAGGA TTTGTAAAGTAATAC deoD 1180964 - 1180242 - | purine nucleoside phosphorylase DeoD-like protein deoC 1181799 - 1181023 - | deoxyribose-phosphate aldolase TERM 1892 1181781 - 1181771 - G 71 -6.8 -4.08144 | TCCATTAAGGATAAA GCGA TTT TCGC CGAATCTTTTAAACT TERM 1893 1181920 - 1181890 - R 78 -7.7 -4.11692 | gap 1, opp_overlap 1181896, overlap 1181896 TACTTAGCTCTAAAA CGACAACACCACTG TTTC CAGTGGTGTT-TCT ATAAATCAATTGCGA TERM 1894 1181896 - 1181915 + r 95 -12.2 -4.06678 | opp_overlap 1181890 1181896 GCTCTAAAACGACAA CACCACTG TTTC CAGTGGTG TTTCTATAAATCAAT TERM 1895 1181915 - 1181896 - R 91 -12.2 -3.68359 | opp_overlap 1181896, overlap 1181890 GCTCTAAAACGACAA CACCACTG TTTC CAGTGGTG TTTCTATAAATCAAT APL_1016 1183204 - 1181936 - | putative nucleoside transporter APL_1017 1183417 - 1184061 + | hypothetical protein TERM 1896 1184050 - 1184105 + T 75 -10.1 -2.70476 | opp_overlap 1184095, overlap 1184049 1184104 TTAGTACGCTATTTT CAAGCGGTCTGATTTTGCAC-GTTTTT TGCA AAAAGCAGAG-AAAATCAAACCGCTTG CTTGTAATTAAGCAT eda 1184754 - 1184113 - | keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase kdgK 1185713 - 1184769 - | 2-dehydro-3-deoxygluconokinase uxaC 1186316 - 1185726 - | uronate isomerase APL_1021 1186618 - 1188096 + | alpha-glucosidase 2 APL_1022 1188100 - 1188336 + | putative transcriptional regulator APL_1023 1188311 - 1188892 + | hypothetical protein APL_1024 1188983 - 1189489 + | peptide methionine sulfoxide reductase MsrA TERM 1897 1189521 - 1189494 - T 93 -7 -5.5604 | opp_overlap 1189498, overlap 1189498 GTAATCAATAAAAAA TTAAGGCGTATC ATTG GATACGCCTTTT TATTATTTACGCATT TERM 1898 1189517 - 1189498 - T 95 -12.2 -4.04157 | opp_overlap 1189498, overlap 1189494 TCAATAAAAAATTAA GGCGTATC ATTG GATACGCC TTTTTATTATTTACG TERM 1899 1189498 - 1189517 + T 100 -12.2 -5.38549 | opp_overlap 1189498 1189494 TCAATAAAAAATTAA GGCGTATC ATTG GATACGCC TTTTTATTATTTACG lsgF 1190324 - 1189524 - | putative glycosyl transferase APL_1026 1191205 - 1190324 - | putative glycosyltransferase APL_1027 1192397 - 1191198 - | hypothetical protein TERM 1900 1191485 - 1191475 - G 71 -4.6 -4.63218 | overlap 1191476 GCTTGGCGAATAAAA CCGG AAT CCGA TCCGCCGTAATAACT APL_1028 1193168 - 1192398 - | putative glycosyltransferase TERM 1901 1192871 - 1192843 - G 84 -9.8 -3.76224 | gap 1, overlap 1192864 TTTTCATTGAGTAAA GCGGTCAAATTTT GCTG AAAATTTG-CCGC AAATAAACAGTCATC APL_1029 1194310 - 1193165 - | hypothetical protein TERM 1902 1193495 - 1193471 - G 86 -5.7 -5.34309 | overlap 1193476 ACTACTAAAGAAAAA GCTAATTACCG GCT CGGCAAGTAAC GGTACTAACACAATT TERM 1903 1193848 - 1193835 - G 82 -6.7 -4.83243 | GCCAGATAAAACAAA CAAGC GATC GCTTG AATGGAACTGAATAA TERM 1904 1194307 - 1194288 - G 77 -5 -5.07652 | overlap 1194291 TGCGCCAAAATAAAA GAACTTAC CATG GTAAGCCC CATACTCAAGACGGT TERM 1905 1194304 - 1194291 - G 73 -5.3 -4.6313 | overlap 1194288 GCCAAAATAAAAGAA CTTAC CATG GTAAG CCCCATACTCAAGAC APL_1030 1195316 - 1194351 - | hypothetical protein TERM 1906 1194391 - 1194411 + g 80 -4.7 -5.08824 | TCAATATCTTTTGTC CATTGGTTG TAA TAACCGGTG TTTTTTCCGTAGGAG TERM 1907 1194915 - 1194940 + g 73 -9.1 -3.55973 | overlap 1194911 1194916 GCAATCTTTGTGTGC GGCAAAAATCG AAGC CGATTTTTGCA TTGCTTCTTGACTTG TERM 1908 1194916 - 1194939 + g 88 -12.6 -2.72861 | overlap 1194915 1194911 CAATCTTTGTGTGCG GCAAAAATCG AAGC CGATTTTTGC ATTGCTTCTTGACTT TERM 1909 1195087 - 1195100 + g 71 -2.4 -5.23016 | overlap 1195097 CAAAGAATCGTTGAA TTCG GCGTGA CGAA TTTTTTCGCTTCTTT TERM 1910 1195194 - 1195176 - G 71 -3 -5.02476 | ATAGTCCTTAAAAAA CTGTTCCG TAC CGGCATAG ATCAATAAATCCCCT TERM 1911 1195227 - 1195204 - G 82 -8.2 -4.31293 | GCATAGATCAATAAA TCCCCTACAT TTAA ATGCAGAGGA TAGTCAAAATACAGT TERM 1912 1195581 - 1195593 + G 75 -3.4 -5.1287 | opp_overlap 1195581 ATTTAAAAAAAATCA GCTA CAGTT TAGC TTTTTTAGGTATCGG TERM 1913 1195788 - 1195752 - g 70 -5.1 -4.55209 | overlap 1195759 GAGATAGCAAAGAAA TCTATAACCCAATCGCC GTC GGCAATCAGGCATTAGA GCGAATGCGTTACGC TERM 1914 1195781 - 1195759 - g 71 -8.4 -3.53841 | overlap 1195752 CAAAGAAATCTATAA CCCAATCGCC GTC GGCAATCAGG CATTAGAGCGAATGC APL_1031 1195472 - 1196212 + | hypothetical protein TERM 1915 1196295 - 1196238 - T 90 -10.9 -3.73294 | opp_overlap 1196242, overlap 1196242 GAAAAATAGCCTAAA TGAAGCGGTCTGATTTTCGTTATTTTT TGTA AAAAATATGGAAAATCAGACCACTTGT CGTATGAATCCGCTG TERM 1916 1196242 - 1196291 + T 95 -13.9 -3.47573 | opp_overlap 1196242 1196238 AATAGCCTAAATGAA GCGGTCTGATTTTCGTTATTTTT TGTA AAAAATATGGAAAATCAGACCAC TTGTCGTATGAATCC TERM 1917 1196291 - 1196242 - T 100 -16.1 -3.54146 | opp_overlap 1196242, overlap 1196238 AATAGCCTAAATGAA GCGGTCTGATTTTCGTTATTTTT TGTA AAAAATATGGAAAATCAGACCAC TTGTCGTATGAATCC priA 1198527 - 1196311 - | primosome assembly protein PriA TERM 1918 1196449 - 1196463 + g 74 -4.2 -5.03314 | opp_overlap 1196449 AATTAATAAAAGCCA GCGG TAATGCC CCGC TTTTTTAGCCATCGG TERM 1919 1197411 - 1197421 + g 70 -5.4 -4.44974 | GCTCAATAAACTTAC CGTT TTG AACG TTTTGTACGCTTTCC TERM 1920 1198099 - 1198113 + g 87 -5 -5.41746 | TTCTGCCAGTTTCTC CAGTAA ATC TTGCTG TTTTTTTGCCCGCTT TERM 1921 1198576 - 1198541 - R 93 -8.4 -5.57396 | opp_overlap 1198546 1198568 ATAATCAATAAAAAA CGAAAGGACAATAGCT TATT ATCTATTGCCCTTTGG GGTTTTGCAAAAAAA pheA 1199769 - 1198612 - | P-protein TERM 1922 1199877 - 1199830 - R 100 -11.5 -5.94713 | opp_overlap 1199835 1199844, overlap 1199832 1199835 AGTCGATAAAAAAAA GATAAGCGGTCGAATTTGCAA GATTTT TTGCAAATTTGACCGCTTGTA AGAATAGAAAGGGGT TERM 1923 1199875 - 1199832 - R 100 -14.1 -4.62054 | opp_overlap 1199835 1199844, overlap 1199830 1199835 TCGATAAAAAAAAGA TAAGCGGTCGAATTTGCAA GATTTT TTGCAAATTTGACCGCTTG TAAGAATAGAAAGGG TERM 1924 1199835 - 1199872 + r 100 -18.7 -3.31144 | opp_overlap 1199835 1199832 1199830, overlap 1199844 ATAAAAAAAAGATAA GCGGTCGAATTTGCAAG ATTT TTTGCAAATTTGACCGC TTGTAAGAATAGAAA TERM 1925 1199872 - 1199835 - R 100 -15.8 -4.36984 | opp_overlap 1199835 1199844, overlap 1199832 1199830 ATAAAAAAAAGATAA GCGGTCGAATTTGCAA GATTTT TTGCAAATTTGACCGC TTGTAAGAATAGAAA prlC 1201925 - 1199892 - | oligopeptidase A TERM 1926 1202059 - 1202010 - R 100 -17.5 -4.8622 | opp_overlap 1202010 TCTTTCAAGTAAAAA GCGGTCGAATTCAGCCTATTTTT TACA AAAAACAGATTAAATTCGACCGC TTGTACGATTAGTAT TERM 1927 1202010 - 1202059 + r 93 -13.1 -3.37732 | opp_overlap 1202010 TCTTTCAAGTAAAAA GCGGTCGAATTCAGCCTATTTTT TACA AAAAACAGATTAAATTCGACCGC TTGTACGATTAGTAT TERM 1928 1202076 - 1202092 + r 73 -9.5 -2.80975 | overlap 1202075 TGTACGATTAGTATT TTACGGT ATG ACCGTAA CTTTCAATAATCGCT pflA 1202805 - 1202068 - | pyruvate formate lyase-activating enzyme 1 TERM 1929 1202912 - 1202868 - R 100 -21.7 -4.34759 | opp_overlap 1202871, overlap 1202871 CAGAATATCAATAAA GAAGCGGTCGGATTCCGCAAA ATT TTTGCAAAATCCGACCGCTTT AAAAGGTCAATGTGA TERM 1930 1202909 - 1202871 - R 100 -23.4 -4.26924 | opp_overlap 1202871, overlap 1202868 AATATCAATAAAGAA GCGGTCGGATTCCGCAAA ATT TTTGCAAAATCCGACCGC TTTAAAAGGTCAATG TERM 1931 1202871 - 1202909 + r 100 -19 -3.55761 | opp_overlap 1202868 1202871 AATATCAATAAAGAA GCGGTCGGATTCCGCAAA ATT TTTGCAAAATCCGACCGC TTTAAAAGGTCAATG pflB 1205244 - 1202932 - | formate acetyltransferase focA 1206161 - 1205337 - | putative formate transporter TERM 1932 1205691 - 1205681 - G 70 -5.4 -4.54047 | TCATGTTACATAAAA TACC GAG GGTA AAGGCTTCTATCCAA APL_1038 1206365 - 1206847 + | hypothetical protein TERM 1933 1206854 - 1206906 + T 75 -8.5 -3.52234 | opp_overlap 1206861, overlap 1206861 TGGTTTTAAGGCCAG TAAAAAAGCGGTCTGTTCTTGCAAG TTT TTTGCAAAATCAGACCGCTTGTCGA TTATAAGTTTCTTAA TERM 1934 1206861 - 1206899 + T 100 -15.4 -3.45321 | opp_overlap 1206861, overlap 1206854 AAGGCCAGTAAAAAA GCGGTCTGTTCTTGCAAG TTT TTTGCAAAATCAGACCGC TTGTCGATTATAAGT TERM 1935 1206899 - 1206861 - T 100 -16.9 -5.16237 | opp_overlap 1206861 1206854 AAGGCCAGTAAAAAA GCGGTCTGTTCTTGCAA GTTTT TTGCAAAATCAGACCGC TTGTCGATTATAAGT htpX 1207776 - 1206907 - | heat shock protein HtpX dinP 1208933 - 1207863 - | DNA polymerase IV APL_1041 1209040 - 1209948 + | hypothetical protein TERM 1936 1209980 - 1209951 - T 93 -9.4 -4.38712 | opp_overlap 1209956, overlap 1209956 CTTAGCCGGATAAAA CAAAATGGCAGG GTTATA CCTGCCATTTTT TGTTTCTTAATCCAC TERM 1937 1209956 - 1209975 + T 100 -9.3 -5.80003 | opp_overlap 1209951 1209956 CCGGATAAAACAAAA TGGCAGG GTTATA CCTGCCA TTTTTTGTTTCTTAA TERM 1938 1209975 - 1209956 - T 100 -9.3 -5.18371 | opp_overlap 1209956, overlap 1209951 CCGGATAAAACAAAA TGGCAGG GTTATA CCTGCCA TTTTTTGTTTCTTAA menF 1211267 - 1209987 - | menaquinone-specific isochorismate synthase APL_1043 1211431 - 1212648 + | aminotransferase AlaT TERM 1939 1212656 - 1212675 + F 95 -15 -3.19789 | overlap 1212670 AATCTTAATCTTTTC TCCGCCCC TATT GGGGCGGA TTACGTCTTACCTAT TERM 1940 1212839 - 1212862 + G 81 -5.4 -5.22039 | CTATTTTTTGCGATT TTCGTGTT AAAGAAAC AACACGAA TTTTTTGCGTTTGCC APL_1044 1212692 - 1213585 + | hypothetical protein APL_1045 1213610 - 1214452 + | hypothetical protein APL_1046 1214449 - 1215066 + | lysine exporter protein TERM 1941 1215138 - 1215111 - T 100 -9.9 -5.00616 | opp_overlap 1215111 TTTTTTTGTAAAAAA TCCCCGAGAGT TTGTCC ACTTTCGGGGA TTTTTTTATTAGAAA TERM 1942 1215111 - 1215138 + T 100 -12.1 -5.7946 | opp_overlap 1215111 TTTTTTTGTAAAAAA TCCCCGAGAGT TTGTCC ACTTTCGGGGA TTTTTTTATTAGAAA hgbA 1217993 - 1215147 - | hemoglobin-binding protein A precursor TERM 1943 1217845 - 1217860 + g 80 -2.6 -5.5112 | overlap 1217855 AGTTGTTTTGCAGAT TTTTTG ATTT CAGAAA TTTTTTGTTGCTGAA TERM 1944 1218041 - 1218018 - R 100 -11.8 -5.84432 | opp_overlap 1218015 GACAAGATAAAAAAA CTGTGCTAGC CAAA ACTAGCACAG TAAATGTTTAATTAT hugZ 1218574 - 1218053 - | heme utilization protein TERM 1945 1218147 - 1218131 - G 81 -9.5 -3.75461 | opp_overlap 1218120 1218119 1218130 1218131, overlap 1218120 GAAAGCTTTACCAAA GCCTTTT ACG AAAAGGC CTTGTGTCGGTTTAA TERM 1946 1218131 - 1218147 + g 70 -9.5 -2.74196 | opp_overlap 1218120 1218131, overlap 1218120 1218119 1218130 GAAAGCTTTACCAAA GCCTTTT ACG AAAAGGC CTTGTGTCGGTTTAA TERM 1947 1218759 - 1218736 - R 100 -9.6 -5.31275 | opp_overlap 1218734 1218736 TTGGAGCATAAAAAA GGAGCAATCC GTTA AGATTGCCCC TCTCTTATCACTTGA TERM 1948 1219819 - 1219836 + r 73 -6.9 -3.99678 | opp_overlap 1219815 1219816 1219819 1219833 ATTTTGCCAAAGCGA CCGCTCG CACA CGATCGG TTTCGTTCTGAAACT nrfX 1220469 - 1219936 - | disulfide bound formation protein E (dsbE) TERM 1949 1219991 - 1220001 + g 75 -3.2 -5.1356 | overlap 1219981 TCCTGCTCGAAATCC GGGT TAT ATCC TTTTTGTTGGTAACG nrfE 1222387 - 1220471 - | cytochrome c-type biogenesis protein NrfE TERM 1950 1220716 - 1220702 - G 72 -9.2 -3.10028 | overlap 1220694 ACGAATATCGTAATA GCGGCG CTC CGCCAC TACCGTCGCAAGCGT TERM 1951 1221295 - 1221282 - G 71 -4.5 -4.58663 | overlap 1221271 ATCATCGGGTAAAAA GTCCC GAGT AGGAC AACCGAAGTCGCTAC TERM 1952 1222350 - 1222336 - G 89 -11.4 -3.55444 | overlap 1222316 GCCCCACTTGGCAAA CAGCGG CAA CCGCTG CAAAAATTAACGTAA TERM 1953 1222514 - 1222499 - R 100 -10.4 -4.56914 | opp_overlap 1222499 TTATGTAAACGAAAA GGGCGA TAAC TCGCCC TTTGTTGTTAAGATA TERM 1954 1222499 - 1222514 + r 100 -10.4 -4.45738 | opp_overlap 1222499 TTATGTAAACGAAAA GGGCGA TAAC TCGCCC TTTGTTGTTAAGATA kefBC 1224423 - 1222558 - | glutathione-regulated potassium-efflux system protein TERM 1955 1223929 - 1223899 - G 82 -7.6 -4.56597 | gap 1 TTCCGGCGCCAAAAA GGCAATCGTCGCC AACAAA GGC-ACGATAGCC AAATCTTCAAATAAT TERM 1956 1224357 - 1224377 + g 75 -5.4 -4.81083 | overlap 1224359 GCACAATCGTAATAC TGGTAGCG AGTAA CGCTACGA TTTTTGCTAATTCCG cyaA 1227040 - 1224512 - | adenylate cyclase TERM 1957 1225078 - 1225059 - G 71 -5 -4.64334 | overlap 1225046 1225062 AACTCCGCAATAAAA TCACGTAG CTCG CTACGCAA ATGACGGCTATAACA TERM 1958 1226793 - 1226781 - G 71 -6.9 -4.24002 | opp_overlap 1226788 TCGGAAAGTTCAAAA GCGGC GAT ACCGC TCGGTGCGTTTTTTA fabB 1227296 - 1228516 + | 3-oxoacyl-(acyl carrier protein) synthase I TERM 1959 1228531 - 1228563 + F 81 -10.8 -2.78816 | opp_overlap 1228531 1228539, overlap 1228539 GACAACCATATAAAG TAAAAAAAGTGCGT TTAAT ACGCACTTTTTTAA TATCCTAAGCGGTCG TERM 1960 1228563 - 1228531 - f 83 -10.8 -3.08671 | opp_overlap 1228531 1228539, overlap 1228539 GACAACCATATAAAG TAAAAAAAGTGCGT TTAAT ACGCACTTTTTTAA TATCCTAAGCGGTCG TERM 1961 1228555 - 1228539 - f 93 -8 -5.75822 | opp_overlap 1228539 1228531, overlap 1228531 TATAAAGTAAAAAAA GTGCGT TTAAT ACGCAC TTTTTTAATATCCTA TERM 1962 1228539 - 1228555 + F 90 -8 -5.23316 | opp_overlap 1228531 1228539, overlap 1228531 TATAAAGTAAAAAAA GTGCGT TTAAT ACGCAC TTTTTTAATATCCTA APL_1056 1228708 - 1229016 + | transposase APL_1057 1229003 - 1229218 + | transposase TERM 1963 1229387 - 1229405 + GF 71 -2.4 -5.09225 | ACGGCTATCGTCGTA TTACGTTA AAG TTACGTGA TTTTTTGGGTGCGAT APL_1058 1229230 - 1229565 + | transposase TERM 1964 1229999 - 1230031 + GF 100 -13.5 -3.17392 | opp_overlap 1229999 CAAGTGAAATTAAAA GGACTGAGCCCTGTA CAA TACAGAACTCAGTCC TTAAATTAAACAGTC TERM 1965 1230031 - 1229999 - gf 100 -17.9 -4.5852 | opp_overlap 1229999 CAAGTGAAATTAAAA GGACTGAGCCCTGTA CAA TACAGAACTCAGTCC TTAAATTAAACAGTC APL_1059 1229531 - 1230040 + | transposase-like protein APL_1060 1230187 - 1230534 + | hypothetical protein APL_1061 1230590 - 1231186 + | hypothetical protein APL_1062 1231227 - 1231601 + | hypothetical protein TERM 1966 1231900 - 1231912 + G 70 -5.5 -4.4261 | opp_overlap 1231900 TGGCGTAAAGAAAAT CTGGA TAT TCCGG TTTTAATCTTAACCG qseB 1231690 - 1232355 + | transcriptional regulatory protein QseB TERM 1967 1232735 - 1232701 - g 71 -5 -4.59109 | CAGAGGCTTTAAAAA CGTCCGCTTAATCG AACACGA CGATGAAGAAGACG AAGTGGATACATGGC qseC 1232348 - 1233724 + | sensor protein QseC TERM 1968 1233763 - 1233743 - T 88 -6.9 -5.09762 | opp_overlap 1233743, overlap 1233737 AGCCGAAGAGAAAAA GACGAAG TTTTCCG CTTCGTC TTTTTTATTTATTGT TERM 1969 1233743 - 1233763 + T 100 -7.6 -5.82036 | opp_overlap 1233743 1233737 AGCCGAAGAGAAAAA GACGAAGT TTTCC GCTTCGTC TTTTTTATTTATTGT APL_1065 1234332 - 1233772 - | hypothetical protein TERM 1970 1234317 - 1234305 - G 70 -5.5 -4.46617 | AAAACAAACCGAAAA CGACC GCT AGTCG AGTGATTTTTCTCAC TERM 1971 1234464 - 1234481 + H 73 -4.1 -4.89567 | opp_overlap 1234463 1234459 TTTTAAACACCAATT TTCCCAT TCAT ACGGGAA TTTTGTCTTTTCAAC yajC 1234526 - 1234822 + | preprotein translocase subunit YajC TERM 1972 1234999 - 1234985 - g 79 -11.4 -2.56596 | overlap 1234981 GCGGTCAGCAAGCGA CGAGCG AAA CGCTCG TTCAAGTACAGGGAA TERM 1973 1235068 - 1235044 - g 78 -9.4 -3.59087 | gap 1, opp_overlap 1235044 1235047, overlap 1235047 AATATCACCCCGAAA TC-AGCCGTTC TCGA GAACGGCTCGA TTTTAGTGCGTTTAG TERM 1974 1235044 - 1235068 + G 88 -9.4 -4.33165 | gap 1, opp_overlap 1235044 1235047, overlap 1235047 AATATCACCCCGAAA TC-AGCCGTTC TCGA GAACGGCTCGA TTTTAGTGCGTTTAG TERM 1975 1235064 - 1235047 - g 83 -11.3 -2.91873 | opp_overlap 1235047 1235044, overlap 1235044 ATCACCCCGAAATCA GCCGTTC TCGA GAACGGC TCGATTTTAGTGCGT TERM 1976 1235047 - 1235064 + G 81 -11.3 -2.78049 | opp_overlap 1235044 1235047, overlap 1235044 ATCACCCCGAAATCA GCCGTTC TCGA GAACGGC TCGATTTTAGTGCGT TERM 1977 1235166 - 1235180 + G 95 -12.8 -3.05463 | opp_overlap 1235160 AGCGTTAAACCTTGC GCCGGC AAC GCCGGC TTGGCTAACCGACAT TERM 1978 1235373 - 1235359 - g 74 -4.2 -5.03747 | AAAGCGGTTAAAAAA GGCGAA AAT TTTGCC ACGGTAATTGAATTT secD 1234849 - 1236696 + | preprotein translocase subunit SecD secF 1236707 - 1237681 + | preprotein translocase subunit SecF TERM 1979 1237761 - 1237723 - f 93 -9.6 -4.16251 | opp_overlap 1237728 1237732, overlap 1237727 1237728 1237732 ATATAATTCGCAAAA TATATCAAAGGGGTGGAA TTT TTCCGCCCCTTTGTCGTA TCCGGATTTCGTAAT TERM 1980 1237757 - 1237727 - f 93 -12.6 -3.41023 | opp_overlap 1237728 1237732, overlap 1237723 1237728 1237732 AATTCGCAAAATATA TCAAAGGGGTGGAA TTT TTCCGCCCCTTTGT CGTATCCGGATTTCG TERM 1981 1237756 - 1237728 - f 100 -16.1 -2.63891 | opp_overlap 1237728 1237732, overlap 1237727 1237723 1237732 ATTCGCAAAATATAT CAAAGGGGTGGAA TTT TTCCGCCCCTTTG TCGTATCCGGATTTC TERM 1982 1237728 - 1237756 + F 100 -18.3 -2.64107 | opp_overlap 1237727 1237723 1237728 1237732, overlap 1237732 ATTCGCAAAATATAT CAAAGGGGTGGAA TTT TTCCGCCCCTTTG TCGTATCCGGATTTC TERM 1983 1237752 - 1237732 - f 93 -11.1 -4.00589 | opp_overlap 1237728 1237732, overlap 1237728 1237727 1237723 GCAAAATATATCAAA GGGGTGGAA TTT TTCCGCCCC TTTGTCGTATCCGGA TERM 1984 1237732 - 1237752 + F 100 -13.3 -4.0162 | opp_overlap 1237732 1237728 1237727 1237723, overlap 1237728 GCAAAATATATCAAA GGGGTGGAA TTT TTCCGCCCC TTTGTCGTATCCGGA TERM 1985 1237862 - 1237844 - g 91 -6.1 -5.55769 | TGTTACAACAAAAAA TCATTGA TCAAC TCAATGA ACAAATTAACCTAGA TERM 1986 1237932 - 1237950 + G 70 -7.4 -3.84246 | opp_overlap 1237931 1237930, overlap 1237933 GTGCTCAAAAAACGG TTTTGCCG GTG CGGCAAAC TTCTTACTTCGTCAT TERM 1987 1237933 - 1237949 + G 77 -10.9 -2.89824 | opp_overlap 1237931 1237930, overlap 1237932 TGCTCAAAAAACGGT TTTGCCG GTG CGGCAAA CTTCTTACTTCGTCA ftnA 1237828 - 1238334 + | ferritin-like protein 1 ftnB 1238334 - 1238831 + | ferritin-like protein 2 TERM 1988 1238891 - 1238929 + F 84 -8.2 -4.57341 | opp_overlap 1238890 1238892 1238894, overlap 1238894 1238925 1238928 TTGTGACCACAGAAT ACACGGGCTTCACAAAAA TTA TTTTAGTGAAGTCCGTTC TTTTTAAGAAAGATT TERM 1989 1238928 - 1238892 - f 79 -9.5 -3.34902 | opp_overlap 1238891 1238894 1238925, overlap 1238890 1238894 TGTGACCACAGAATA CACGGGCTTCACAAAAA TTA TTTTAGTGAAGTCCGTT CTTTTTAAGAAAGAT TERM 1990 1238894 - 1238926 + F 100 -14.3 -4.40561 | opp_overlap 1238892 1238890 1238894, overlap 1238891 1238925 TGACCACAGAATACA CGGGCTTCACAAAAA TTA TTTTAGTGAAGTCCG TTCTTTTTAAGAAAG TERM 1991 1238926 - 1238894 - f 89 -12.1 -3.24076 | opp_overlap 1238894 1238891 1238925, overlap 1238892 1238890 TGACCACAGAATACA CGGGCTTCACAAAAA TTA TTTTAGTGAAGTCCG TTCTTTTTAAGAAAG APL_1071 1239071 - 1240372 + | hypothetical protein TERM 1992 1240384 - 1240421 + T 83 -11.3 -2.93623 | opp_overlap 1240384, overlap 1240381 1240379 1240386 CTAATCTCAAAAAAA GACCGCTTGTAAGCC TATAACGT GGCAAACAAGCGGTC TAATCTTTTAAAAAA TERM 1993 1240421 - 1240384 - T 100 -11.3 -5.47399 | opp_overlap 1240384 1240381 1240379 1240386 CTAATCTCAAAAAAA GACCGCTTGTAAGCC TATAACGT GGCAAACAAGCGGTC TAATCTTTTAAAAAA APL_1072 1241019 - 1240429 - | Maf-like protein APL_1073 1241175 - 1241717 + | hypothetical protein thiI 1243261 - 1241813 - | thiamine biosynthesis protein ThiI TERM 1994 1243299 - 1243336 + r 82 -8.7 -4.08394 | gap 1, opp_overlap 1243299 AAGTTGCCCAAACAA GCGGTTAAATTTCGCTAA AAA TTTGC-AAATTTAACTGC TTTTCAGACAAGTAT TERM 1995 1243420 - 1243362 - R 100 -19.9 -4.68456 | gap 1, opp_overlap 1243375, overlap 1243363 AGTATCAAAAAACAA TTACCACGGAAAGCACGGAATACACAGA AAAT TCCGTGAACTCCGTGTTTTCCGTGGTA- AGAAAACAACTTAAA TERM 1996 1243420 - 1243363 - R 100 -25.9 -3.39447 | opp_overlap 1243375, overlap 1243362 GTATCAAAAAACAAT TACCACGGAAAGCACGGAATACACAGA AAAT TCCGTGAACTCCGTGTTTTCCGTGGTA AGAAAACAACTTAAA TERM 1997 1243375 - 1243408 + r 81 -8.1 -4.21194 | opp_overlap 1243362 1243363 AATTACCACGGAAAG CACGGAATACACAGA AAAT TCCGTGAACTCCGTG TTTTCCGTGGTAAGA purA 1244746 - 1243448 - | adenylosuccinate synthetase TERM 1998 1243700 - 1243716 + g 74 -4.5 -4.74706 | TTCACCGTTTGGCAT TTTGTAT GCA GTACAAA TTTTTAACTCTTCAA TERM 1999 1244331 - 1244367 + g 82 -4.5 -5.2853 | gap 3, overlap 1244356 CGAGCCACTTTATCC TC-GTACG-CCGGAC-CG ATAC CGCGACCGGTCGTACCGA TTTTGTTTTTACCTA TERM 2000 1244924 - 1244895 - R 86 -5.2 -5.76237 | gap 2, opp_overlap 1244903, overlap 1244901 GAGAGAAATAAAAAA GTTAAAGACCCGAT ATAG ATCGGGTC-TT-AC GGATACAATTATTTT TERM 2001 1244920 - 1244901 - R 100 -12.2 -4.0964 | opp_overlap 1244903, overlap 1244895 AATAAAAAAGTTAAA GACCCGAT ATAG ATCGGGTC TTACGGATACAATTA TERM 2002 1244903 - 1244918 + r 71 -9 -3.04263 | opp_overlap 1244901 1244895 TAAAAAAGTTAAAGA CCCGAT ATAG ATCGGG TCTTACGGATACAAT hflC 1245820 - 1244933 - | protein HflC TERM 2003 1245180 - 1245196 + g 75 -3 -5.10208 | gap 1, overlap 1245176 1245183 TTCTTATCTACTTCG GCACGAA TAAT TTCG-GC TTTTTCTTCACCTTG TERM 2004 1245350 - 1245364 + g 78 -7.1 -4.57569 | overlap 1245343 TTCGGCACCGTCATC GCCGT CATTT ACGGC TTTTTGCGCACCTGC TERM 2005 1245554 - 1245565 + g 78 -4.4 -5.24531 | TTTCACGTAAGAATC GACT AATA AGTC TTTTTTCTCAACCGT hflK 1247013 - 1245823 - | protein HflK TERM 2006 1245916 - 1245926 + g 71 -4.6 -4.62471 | opp_overlap 1245916, overlap 1245897 1245924 TTGCTGAACAACAAT CGGC GCC GCTG TTTTTGCCGGTTCGG TERM 2007 1247169 - 1247150 - R 95 -8.5 -5.27335 | TTTTGCAAATAAAAA GGGCGAG AAATTA CCCGCCC CGATTTAGAAATTAA trxA 1247505 - 1247188 - | thioredoxin TERM 2008 1247558 - 1247541 - R 90 -8.4 -5.10163 | opp_overlap 1247541 AATCCGAAAAGAAAA CGCCAC TTGACC GTGGCG TTAAGTTACACCGTA TERM 2009 1247541 - 1247558 + r 70 -8.4 -3.17392 | opp_overlap 1247541 AATCCGAAAAGAAAA CGCCAC TTGACC GTGGCG TTAAGTTACACCGTA APL_1079 1248933 - 1247641 - | putative purine permease TERM 2010 1249066 - 1249023 - R 100 -15.6 -5.1615 | opp_overlap 1249026, overlap 1249026 TGAACAGTTAAAAAA TAAGCGGTTGAATTTACAAA TTTC CCTGTAAATTCAACCGCTTT ATATTAGTTAAACTA TERM 2011 1249026 - 1249063 + r 100 -15.9 -4.2772 | opp_overlap 1249023 1249026 ACAGTTAAAAAATAA GCGGTTGAATTTACA AATTTCCC TGTAAATTCAACCGC TTTATATTAGTTAAA TERM 2012 1249063 - 1249026 - R 100 -17.3 -4.65666 | opp_overlap 1249026, overlap 1249023 ACAGTTAAAAAATAA GCGGTTGAATTTACAAA TTTC CCTGTAAATTCAACCGC TTTATATTAGTTAAA metK 1250246 - 1249095 - | S-adenosylmethionine synthetase TERM 2013 1249430 - 1249408 - G 73 -9.1 -3.48276 | TTTTTCGCCACATAA CGTGCTGCG TATGC CGCAGAACG GTCCACTTTTGACGG APL_1081 1250466 - 1251359 + | homocysteine/selenocysteine methylase TERM 2014 1251416 - 1251368 - f 73 -8.3 -3.59468 | opp_overlap 1251368, overlap 1251378 AAAATAACAGGAGAA GCGGTCAAAATTGGCAATTTTTT GCA AAAAATCCGCAAAATTTAACCGC TTGTATCAAACACAA TERM 2015 1252071 - 1252083 + G 70 -7.7 -3.59262 | opp_overlap 1252064 AAACACGATGTTAAT TACCC TTT GGGTA TTTACCGGTGTGGAA arcD 1251451 - 1252866 + | putative arginine/ornithine antiporter TERM 2016 1252877 - 1252902 + F 100 -8.3 -5.98675 | opp_overlap 1252877 1252875 GCTAAAAAGATAATA TCCTCTCGTGC TTCG GCATTAGAGGA TTTTTTATTTTTATG TERM 2017 1253096 - 1253115 + G 71 -5 -4.70772 | overlap 1253099 ACTCAGCGGTTGGCT TATTACCG GTAT CGGTATTA TTTTCTTAGGTCTAT TERM 2018 1253099 - 1253112 + G 76 -6.7 -4.44914 | overlap 1253096 CAGCGGTTGGCTTAT TACCG GTAT CGGTA TTATTTTCTTAGGTC TERM 2019 1253477 - 1253487 + G 82 -8.2 -4.38116 | GCTCTTTTTATTTAT CGGC TTA GCCG TTTGGTTTTTCTCAC arcD 1252962 - 1254368 + | putative arginine/ornithine antiporter TERM 2020 1254595 - 1254613 + G 74 -8.1 -3.91984 | overlap 1254576 1254575 CGTGTTTTATATACT CGCCGAG TTCGT TTCGGCG TTATTTAGCGAATCT APL_1084 1254377 - 1255156 + | hypothetical protein argE 1255171 - 1256313 + | acetylornithine deacetylase TERM 2021 1256351 - 1256369 + T 93 -11.7 -3.96892 | opp_overlap 1256351 TTTTTACAACAAAAA GGGAGCG ATTAA CGCTCCC TTTCTCATAACAGTT TERM 2022 1256369 - 1256351 - T 100 -11.7 -5.18726 | opp_overlap 1256351 TTTTTACAACAAAAA GGGAGCG ATTAA CGCTCCC TTTCTCATAACAGTT ompW 1257041 - 1256394 - | outer membrane protein W precursor TERM 2023 1257091 - 1257076 - H 89 -3.3 -5.93252 | opp_overlap 1257076 CTTAAAAATAAAAAA GTAAC CAATTC GTTAC GTTAATAACATTCTA TERM 2024 1258585 - 1258565 - g 75 -8.3 -3.77219 | ATTATTCAACTTAAA TTGGAACGC CAA GCGTTACAA AAAGAGGAAGATGAA clpB 1257302 - 1259875 + | chaperone ClpB TERM 2025 1259924 - 1259888 - T 100 -16.7 -4.08948 | opp_overlap 1259888 TAATTCCATAAACAA GCGGTCGAGTTTGCAGA AAT TTTGCAAATTCGACCGC TTTTCTTTTAGGCGT TERM 2026 1259888 - 1259924 + T 100 -21.1 -5.08255 | opp_overlap 1259888 TAATTCCATAAACAA GCGGTCGAGTTTGCAGA AAT TTTGCAAATTCGACCGC TTTTCTTTTAGGCGT APL_1088 1260933 - 1259932 - | hypothetical protein arsC 1261349 - 1260945 - | arsenate reductase TERM 2027 1261396 - 1261420 + r 77 -8.7 -3.66654 | opp_overlap 1261396 TGTTAAGGTAAAAAA TTTTGTGGG CATTTCA CCCACAAAA TTTGCAATTCGGATC TERM 2028 1261420 - 1261396 - R 100 -10.1 -5.15969 | opp_overlap 1261396 TGTTAAGGTAAAAAA TTTTGTGGGCA TTT CACCCACAAAA TTTGCAATTCGGATC arsR 1261723 - 1261409 - | putative transcriptional regulator TERM 2029 1261781 - 1261740 - R 93 -11.3 -3.89893 | opp_overlap 1261750 1261752, overlap 1261737 1261741 ACAATATTATAACAA GCTTATTGAATATTTCAAT AACC ATTGAAATATTCAATAAAA AAATAGCGGTCGTCT TERM 2030 1261780 - 1261741 - R 95 -14.8 -2.92851 | opp_overlap 1261750 1261752, overlap 1261737 1261740 CAATATTATAACAAG CTTATTGAATATTTCAAT AACC ATTGAAATATTCAATAAA AAAATAGCGGTCGTC TERM 2031 1261825 - 1261785 - R 91 -4.8 -5.8187 | gap 1, opp_overlap 1261787, overlap 1261787 TATTCAATAAAAAAA TAGCGGTCGT-CTTTGCAA AAAA TAACAAAATACGACCGCTT GTCAGTTTATAAAAC TERM 2032 1261823 - 1261787 - R 82 -7.4 -4.54306 | gap 1, opp_overlap 1261787, overlap 1261785 TTCAATAAAAAAATA GCGGTCGT-CTTTGCAA AAAA TAACAAAATACGACCGC TTGTCAGTTTATAAA aspA 1263278 - 1261851 - | aspartate ammonia-lyase TERM 2033 1263353 - 1263368 + r 72 -6.2 -4.4009 | opp_overlap 1263353 TTGTATAAAAAGAAA TGTGAT TTAG ATCACA TTTTATAGACTGCGA TERM 2034 1263368 - 1263353 - R 81 -6.2 -4.96501 | opp_overlap 1263353 TTGTATAAAAAGAAA TGTGAT TTAG ATCACA TTTTATAGACTGCGA APL_1092 1263700 - 1263419 - | hypothetical protein TERM 2035 1263723 - 1263749 + r 83 -11.6 -2.85019 | opp_overlap 1263724, overlap 1263720 AACTCCTAGAAAAAA ACCGCTTGTAGT ATA GCTACAAGCGGC TCGATTTTTACCATT TERM 2036 1263748 - 1263724 - R 100 -14.4 -5.61596 | opp_overlap 1263723 1263720 ACTCCTAGAAAAAAA CCGCTTGTAG TATAG CTACAAGCGG CTCGATTTTTACCAT APL_1093 1264523 - 1263774 - | hypothetical protein TERM 2037 1264023 - 1264006 - G 74 -4.2 -4.92314 | opp_overlap 1263997, overlap 1263997 1264015 ATTAAGGGATAAAAA TCCTTA AATGTA TAAGGA ACATATACCCCTTCT TERM 2038 1265991 - 1265977 - g 80 -2.9 -5.47159 | CCTCAATACAAAAAA CATAT TGAAG ATATG AGATCAAAATTAACT APL_1094 1264888 - 1266276 + | putative transcription regulator protein TERM 2039 1266304 - 1266281 - T 100 -15.4 -5.13473 | opp_overlap 1266277 1266276 ATCATATCTAAAAAA CCGCTTGTAG TGAG CTACAAGCGG TCCGATTTCTGAATG purM 1267367 - 1266330 - | phosphoribosylaminoimidazole synthetase TERM 2040 1268393 - 1268420 + G 72 -6.3 -4.28049 | gap 1, opp_overlap 1268393 1268392 GACGTGAAATAAGAG CCGATTTGCCCG AACTG CTGGCAAA-CGG TTTTAAGGTTTTAAA APL_1096 1267582 - 1268715 + | hypothetical protein TERM 2041 1268755 - 1268793 + F 85 -8.9 -4.13206 | opp_overlap 1268755 ATAGCCTCTCGACAA GCGGTCTCTTTTTGCAA AAAAA TTGCAAATTCAGACCGC TTATTCTTTCGTGGT TERM 2042 1268793 - 1268755 - f 73 -8.9 -3.29263 | opp_overlap 1268755 ATAGCCTCTCGACAA GCGGTCTCTTTTTGCAA AAAAA TTGCAAATTCAGACCGC TTATTCTTTCGTGGT queC 1268863 - 1269531 + | queuosine biosynthesis protein QueC TERM 2043 1269891 - 1269878 - g 70 -3.7 -4.7657 | opp_overlap 1269879, overlap 1269879 GAAAAACTGGAAAAA GCCGG TTTA CCGGT CAGTTTAATTCGCCT APL_1098 1269524 - 1269946 + | putative 6-pyruvoyl tetrahydrobiopterin synthase APL_1099 1270039 - 1270671 + | hypothetical protein TERM 2044 1270687 - 1270711 + T 100 -9.4 -5.93252 | gap 1, opp_overlap 1270687 TATTCATATGGTAAA GGCATC-GAAG ATTT CTTCCGATGCC TTTTTTGTTTTTAGG TERM 2045 1270711 - 1270687 - T 80 -9.4 -3.64103 | gap 1, opp_overlap 1270687 TATTCATATGGTAAA GGCATC-GAAG ATTT CTTCCGATGCC TTTTTTGTTTTTAGG TERM 2046 1270800 - 1270771 - T 83 -11.1 -3.13908 | opp_overlap 1270773, overlap 1270763 AAGTTAATCACTTAA TATTCTTATTTTT TACC AAAAATAAGAATA TATAAATAGAACTAA TERM 2047 1270773 - 1270798 + T 73 -9.3 -2.91383 | opp_overlap 1270771 1270763 GTTAATCACTTAATA TTCTTATTTTT TACC AAAAATAAGAA TATATAAATAGAACT APL_1100 1271369 - 1270812 - | hypothetical protein TERM 2048 1271734 - 1271769 + r 71 -7.9 -3.60336 | opp_overlap 1271753, overlap 1271736 AAATAAAAATCACTA TGCTGTTAATAAAAT CAGATA ATTTTATTAACGGTA TTACTCTTTTATATT TERM 2049 1271736 - 1271767 + r 72 -8.3 -3.3549 | opp_overlap 1271753, overlap 1271734 ATAAAAATCACTATG CTGTTAATAAAAT CAGATA ATTTTATTAACGG TATTACTCTTTTATA TERM 2050 1272015 - 1271978 - R 84 -11.5 -3.08464 | opp_overlap 1271979 1271984, overlap 1271984 CTACTATCTATTGAA CAAAAAGCCCTCAAATA TCAC TACCTGAGGGCTTTTCA ATTTTTGATAAAAAT TERM 2051 1271984 - 1272009 + r 74 -6.1 -4.49644 | opp_overlap 1271978 1271984, overlap 1271979 TCTATTGAACAAAAA GCCCTCAAATA TCAC TACCTGAGGGC TTTTCAATTTTTGAT TERM 2052 1272009 - 1271984 - R 100 -10.5 -5.10461 | opp_overlap 1271984 1271979, overlap 1271978 TCTATTGAACAAAAA GCCCTCAAATA TCAC TACCTGAGGGC TTTTCAATTTTTGAT pepA 1273538 - 1272039 - | putative cytosol aminopeptidase TERM 2053 1272079 - 1272104 + g 72 -7.5 -4.07568 | opp_overlap 1272080 1272086, overlap 1272080 AAGAATTGGCTTAAC AGTGAAACCGG TCTT CCGGTTGCACC TTTTGCCGCACCGGA TERM 2054 1272103 - 1272080 - G 79 -11 -3.03338 | opp_overlap 1272080 1272079, overlap 1272086 AGAATTGGCTTAACA GTGAAACCGG TCTT CCGGTTGCAC CTTTTGCCGCACCGG TERM 2055 1272080 - 1272103 + g 79 -11 -3.04398 | opp_overlap 1272080 1272086, overlap 1272079 AGAATTGGCTTAACA GTGAAACCGG TCTT CCGGTTGCAC CTTTTGCCGCACCGG TERM 2056 1272097 - 1272086 - G 70 -7.2 -3.76373 | opp_overlap 1272080 1272079, overlap 1272080 GGCTTAACAGTGAAA CCGG TCTT CCGG TTGCACCTTTTGCCG TERM 2057 1272625 - 1272596 - G 71 -8.7 -3.31792 | gap 1, opp_overlap 1272596 1272595 CCAGCACGCCGATAA CGTTCAGCGGTAAT TTC ATTTCCGCT-AACG CTTTCATCGTACCGT TERM 2058 1273925 - 1273915 - g 78 -4 -5.22312 | ATTGATATGAAAAAA TTAC TCC GTAA CGTTCTTCTCTCCGG TERM 2059 1274283 - 1274252 - g 71 -2.3 -5.23943 | gap 1 CATCAAAAAAACAAA CGGCACC-GTTAAT TACCC ATAAACCGGTTCCG GAGCAATTTATCGGA APL_1102 1273906 - 1274721 + | hypothetical protein TERM 2060 1274885 - 1274901 + F 83 -11.5 -2.62735 | overlap 1274873 TTTTGTTTGATAGTC GCCGCTG AAT CGGCGGC TAATATGAGAGATAT APL_1103 1274992 - 1276023 + | hypothetical protein APL_1104 1276024 - 1277106 + | hypothetical protein TERM 2061 1277156 - 1277117 - f 100 -16 -3.97645 | opp_overlap 1277117, overlap 1277137 1277149 1277153 ATTAATACATAACAA GCGGTTAAATTTCTGCAA AATT TTGCAAAAAATTAACCGC TTTACCACGCACGAG TERM 2062 1277117 - 1277156 + F 100 -13.8 -3.53012 | opp_overlap 1277117 1277137 1277149 1277153 ATTAATACATAACAA GCGGTTAAATTTCTGCAA AATT TTGCAAAAAATTAACCGC TTTACCACGCACGAG TERM 2063 1277193 - 1277149 - f 76 -4.1 -5.03747 | opp_overlap 1277117 1277161 1277178, overlap 1277117 1277153 AAATTTTGCAAAAAA TTAACCGCTTTACCACGCACG AGC CGTACGTGGTTATGAGGCTCT TCGAGCCAGCTGAGC TERM 2064 1277189 - 1277153 - f 93 -11.5 -3.93166 | opp_overlap 1277117 1277161 1277178, overlap 1277117 1277149 TTTGCAAAAAATTAA CCGCTTTACCACGCACG AGC CGTACGTGGTTATGAGG CTCTTCGAGCCAGCT TERM 2065 1277161 - 1277181 + F 86 -11.1 -3.33315 | opp_overlap 1277153 1277149, overlap 1277178 AAATTAACCGCTTTA CCACGCACG AGC CGTACGTGG TTATGAGGCTCTTCG TERM 2066 1277512 - 1277502 - g 74 -6.8 -4.25104 | opp_overlap 1277492 GGTTCCGGATTAAAA CCGA TTA TCGG TGCGGATATTTTCGT TERM 2067 1277913 - 1277883 - g 80 -6.2 -4.82901 | opp_overlap 1277883 CCTTTTTCACAAAAA CATCAATTACCG TTAGTTG CGGTAAATGACG TGGTATTCTTGAAAG TERM 2068 1278122 - 1278086 - g 91 -10.4 -4.09739 | gap 1, opp_overlap 1278085 1278084 1278088 GCAAGCGGTCGAAAA TACGGTACAAATTGCAA TGCG TTGCAATGTG-ACCGTA CGTTTAGGCGAATAT TERM 2069 1278863 - 1278830 - g 75 -8.9 -3.60098 | gap 1, opp_overlap 1278839 1278840 1278842, overlap 1278840 1278843 AGGTGTGACCCGAAA TGCTGGTAAACACGCC GGT GGCGTGGTTATC-GCA CCAACGGCAATTACC TERM 2070 1278854 - 1278840 - g 89 -11.4 -3.56594 | opp_overlap 1278840 1278839 1278842, overlap 1278830 1278843 CGAAATGCTGGTAAA CACGCC GGT GGCGTG GTTATCGCACCAACG TERM 2071 1278840 - 1278854 + G 80 -11.4 -2.57132 | opp_overlap 1278830 1278840 1278843, overlap 1278839 1278842 CGAAATGCTGGTAAA CACGCC GGT GGCGTG GTTATCGCACCAACG dnaE 1277313 - 1280789 + | DNA polymerase III subunit alpha TERM 2072 1280875 - 1280902 + T 89 -8.6 -4.62984 | opp_overlap 1280875, overlap 1280870 ATTTTATACTAAAAA GGGTATTGAT TTTATATC ATCAATACCC TTTTCTATATACTCA TERM 2073 1280902 - 1280875 - T 93 -8.6 -4.80882 | opp_overlap 1280875 1280870 ATTTTATACTAAAAA GGGTATTGAT TTTATATC ATCAATACCC TTTTCTATATACTCA TERM 2074 1281520 - 1281499 - T 79 -4.5 -5.33026 | overlap 1281500 GAACTTAAAGAAAAA CTTTGCGAT CTAA ATCACAAAA AAAATCAAAAATATA TERM 2075 1281623 - 1281645 + T 71 -6.3 -4.25104 | opp_overlap 1281623 GAATTGAATAAAAAA TACTAGCGG TTTAT CCACTAGTA TTTTCATAAAAAAGA TERM 2076 1281645 - 1281623 - T 95 -8.5 -5.5074 | opp_overlap 1281623 GAATTGAATAAAAAA TACTAGCGG TTTAT CCACTAGTA TTTTCATAAAAAAGA purT 1282847 - 1281666 - | phosphoribosylglycinamide formyltransferase 2 TERM 2077 1282892 - 1282943 + r 100 -14.2 -4.70659 | gap 1, opp_overlap 1282899, overlap 1282896 1282899 TTTGCGCAGATTATA TAATAAAGCGGTAAGATTTTGTAAA AAT TTTGCAAAATCTTACCGCTT-GTTC TTTTTAAGTATCGGA TERM 2078 1282896 - 1282940 + r 100 -19.7 -4.46215 | opp_overlap 1282899, overlap 1282892 1282899 CGCAGATTATATAAT AAAGCGGTAAGATTTTGTAAA AAT TTTGCAAAATCTTACCGCTTG TTCTTTTTAAGTATC TERM 2079 1282937 - 1282899 - R 100 -19.2 -4.41716 | opp_overlap 1282899 1282896 1282892 AGATTATATAATAAA GCGGTAAGATTTTGTAAA AAT TTTGCAAAATCTTACCGC TTGTTCTTTTTAAGT TERM 2080 1282899 - 1282937 + r 100 -21.4 -4.32491 | opp_overlap 1282899, overlap 1282896 1282892 AGATTATATAATAAA GCGGTAAGATTTTGTAAA AAT TTTGCAAAATCTTACCGC TTGTTCTTTTTAAGT plsB 1285444 - 1282970 - | glycerol-3-phosphate acyltransferase TERM 2081 1283770 - 1283786 + g 73 -5.8 -4.57569 | TCGGTACGATAGCAT CGTCGG AATAA CTGACG TTTTTAAACAGCTGC lexA 1285601 - 1286233 + | LexA repressor TERM 2082 1286376 - 1286402 + G 72 -8.1 -3.85909 | opp_overlap 1286375 1286376, overlap 1286377 TACGCTGGGTGAAAT CGCACATCAAT TAAAT ATTGATGTGCC TTTGGATTTGCGTCG TERM 2083 1286377 - 1286401 + G 83 -11.6 -2.91063 | opp_overlap 1286376 1286375, overlap 1286376 ACGCTGGGTGAAATC GCACATCAAT TAAAT ATTGATGTGC CTTTGGATTTGCGTC TERM 2084 1286470 - 1286450 - g 84 -9.7 -3.81027 | overlap 1286468 GGCAATTAATCGAAA CGGCTTTAG GTG CAAAAGCCG GCAGCAAGCCCGAAC TERM 2085 1286693 - 1286704 + G 70 -5.8 -4.37658 | overlap 1286675 TTGCCGAACGCCACA TCGG TCAG CCGA TTTTATGGGAGCCTT mutH 1286293 - 1286973 + | DNA mismatch repair protein APL_1110 1287059 - 1287790 + | hypothetical protein TERM 2086 1287798 - 1287819 + F 89 -7.3 -5.21709 | overlap 1287815 AAGCGTAATAAATCG GCCTTTGAT GAAA ATCAGGGGC TTTTTTAATGTAAAA nagZ 1287905 - 1288942 + | beta-hexosaminidase rumB 1289023 - 1290198 + | 23S rRNA methyluridine methyltransferase TERM 2087 1291459 - 1291444 - g 74 -7.6 -3.98173 | TCAAATTCAACCAAA TCGGTT CATT AACCGA AACTTTAGCGGCAAT eno 1290405 - 1291715 + | phosphopyruvate hydratase TERM 2088 1291762 - 1291741 - g 100 -13.1 -4.3255 | opp_overlap 1291741 TTCGTAAGTAATAAA TGCCACAGA AATT TCTGTGGCA TTTTTGTAATTTTTA TERM 2089 1291741 - 1291762 + G 100 -13.1 -5.1286 | opp_overlap 1291741 TTCGTAAGTAATAAA TGCCACAGA AATT TCTGTGGCA TTTTTGTAATTTTTA APL_1114 1291740 - 1292420 + | hypothetical protein TERM 2090 1292683 - 1292694 + G 86 -5.8 -5.29445 | opp_overlap 1292682 1292683 TGTTGGTCGGAAAAC GGCT ATCA AGCC TTTTTATTGTTAAAC APL_1115 1292434 - 1292844 + | hypothetical protein TERM 2091 1292849 - 1292901 + T 93 -10.1 -4.18702 | opp_overlap 1292853 1292856, overlap 1292853 GGCTAGGCTAATCAC CAAACAAGTGGTTAAATTTCGCTAA TTT TTAACAAAATTTAACCGCTTGTCCG TTTATTGGCGATTAT TERM 2092 1292853 - 1292897 + T 89 -13.9 -2.75825 | opp_overlap 1292853 1292856, overlap 1292849 AGGCTAATCACCAAA CAAGTGGTTAAATTTCGCTAA TTT TTAACAAAATTTAACCGCTTG TCCGTTTATTGGCGA TERM 2093 1292897 - 1292853 - T 100 -16.1 -3.84514 | opp_overlap 1292853 1292849, overlap 1292856 AGGCTAATCACCAAA CAAGTGGTTAAATTTCGCTAA TTT TTAACAAAATTTAACCGCTTG TCCGTTTATTGGCGA TERM 2094 1292894 - 1292856 - T 95 -12 -4.04927 | opp_overlap 1292853 1292849, overlap 1292853 CTAATCACCAAACAA GTGGTTAAATTTCGCTAA TTT TTAACAAAATTTAACCGC TTGTCCGTTTATTGG recQ 1294711 - 1292903 - | ATP-dependent DNA helicase RecQ TERM 2095 1293744 - 1293756 + g 72 -6.2 -4.2704 | GGTAAATCATCACGT CCGG CACGC CCGG TTTCTTGATAGTAGG TERM 2096 1294798 - 1294741 - R 100 -15.1 -5.55698 | opp_overlap 1294751, overlap 1294743 1294748 1294751 GATAAGCTAAAAAAA GACTAGACAAGCGGTCGCTTTTGCAAA ATAT TTTGCAAAAGCGACCGCTTATTGATTA AAAACTGATTTGTTC TERM 2097 1294794 - 1294743 - R 100 -18.5 -4.40173 | gap 2, opp_overlap 1294751, overlap 1294741 1294748 1294751 TAAGCTAAAAAAAGA CTAGACAAGCGGTCGCTTTTGCAAA ATAT TTTGCAAAAGCGACCGCTTAT-T-G ATTAAAAACTGATTT TERM 2098 1294791 - 1294748 - R 100 -26.4 -3.11522 | opp_overlap 1294751, overlap 1294743 1294741 1294751 TAAAAAAAGACTAGA CAAGCGGTCGCTTTTGCAAA ATAT TTTGCAAAAGCGACCGCTTA TTGATTAAAAACTGA TERM 2099 1294788 - 1294751 - R 100 -25.9 -3.65046 | opp_overlap 1294751, overlap 1294748 1294743 1294741 AAAAAGACTAGACAA GCGGTCGCTTTTGCAAA ATAT TTTGCAAAAGCGACCGC TTATTGATTAAAAAC TERM 2100 1294751 - 1294788 + r 100 -25.9 -3.81146 | opp_overlap 1294751 1294748 1294743 1294741 AAAAAGACTAGACAA GCGGTCGCTTTTGCAAA ATAT TTTGCAAAAGCGACCGC TTATTGATTAAAAAC cyaY 1295101 - 1294796 - | frataxin-like protein TERM 2101 1295812 - 1295789 - R 90 -8.2 -4.98672 | TCGAAAAACACAAAA GGAATATGCT GTTT AGCAAATTCC GACATCATATGATTT gcp 1296970 - 1295927 - | O-sialoglycoprotein endopeptidase TERM 2102 1296001 - 1296011 + g 71 -3.2 -5.03314 | opp_overlap 1295998 TGATGCTTAAATCGC TGGT TTC ACCG TTTTTTAAGCGTAAA TERM 2103 1297024 - 1296999 - R 95 -12.7 -3.73107 | TTATGAAATGGGAAA GGGGCATTATT CAAA AATAACGCCCC TAAAATTGCAAAACT APL_1121 1297838 - 1297062 - | putative lipoprotein TERM 2104 1297094 - 1297104 + g 84 -5.4 -5.28414 | ATTCAGGCTTAATCG CTTC AGG GAAG TTTTTATCTTTATTC TERM 2105 1298030 - 1298013 - g 76 -9.8 -3.37018 | opp_overlap 1298012 1298011 AACAAATGACATTAA CGGCGG AAGTCA CCGCCG ACTTATTAGGCTGTC TERM 2106 1298595 - 1298576 - g 72 -7.8 -3.74693 | overlap 1298577 CGCCATCCGACCAAA CGCACCGC AATG GCGGTACA CCCGATGGGTAAGCC rluD 1297991 - 1298968 + | 23S rRNA pseudouridine synthase D TERM 2107 1299007 - 1298972 - T 73 -9.1 -2.80016 | opp_overlap 1298977, overlap 1298977 TTGGATTATTAATGA GAAAAGTCCGTAGCC TTAAAC GGTTACGGACTTTTT ATTTTTACGGCGAGT TERM 2108 1298977 - 1299002 + T 100 -11.2 -5.61881 | opp_overlap 1298977 1298972 TTATTAATGAGAAAA GTCCGTAGCC TTAAAC GGTTACGGAC TTTTTATTTTTACGG TERM 2109 1299002 - 1298977 - T 89 -9 -4.56607 | opp_overlap 1298977, overlap 1298972 TTATTAATGAGAAAA GTCCGTAGCC TTAAAC GGTTACGGAC TTTTTATTTTTACGG APL_1123 1299725 - 1299012 - | hypothetical protein TERM 2110 1299644 - 1299622 - G 70 -2.6 -5.01042 | opp_overlap 1299626, overlap 1299626 1299636 AACGCAAACCAAAAA TGAAGCGGAC TAA ATCCGCTTTT AAAACCGGCATATAA TERM 2111 1299640 - 1299626 - G 72 -7.8 -3.90592 | opp_overlap 1299626, overlap 1299622 1299636 CAAACCAAAAATGAA GCGGAC TAA ATCCGC TTTTAAAACCGGCAT TERM 2112 1299626 - 1299640 + g 73 -7.1 -4.07687 | opp_overlap 1299626 1299622 1299636 CAAACCAAAAATGAA GCGGA CTAAA TCCGC TTTTAAAACCGGCAT TERM 2113 1299767 - 1299749 - R 100 -13.2 -5.2853 | opp_overlap 1299746 1299745 TACCTAAAAACAAAA GGCGACTA ACA TAGTCGCC TCGGTATTCTAAGGA pfkA 1300760 - 1299786 - | 6-phosphofructokinase TERM 2114 1300028 - 1300040 + g 73 -9.1 -3.45088 | overlap 1300020 1300024 1300031 TTGCGCGCGTTTCAT GACCG AAG CGGTC TTCGATTTCTTTTGC TERM 2115 1300396 - 1300414 + g 74 -10.4 -2.66272 | opp_overlap 1300399, overlap 1300392 1300399 ATACCGATACACGGA TAACCGAA TTC TTCGGTTA TAAGTTTCGCTCCCA APL_1125 1302072 - 1300870 - | putative cysteine desulfurase TERM 2116 1301400 - 1301387 - G 70 -8.1 -3.63744 | overlap 1301385 TTTCCGGTTAAAACA CCGAC ACCG GTCGG TCCATACATTTTATG APL_1126 1302770 - 1302072 - | putative micrococcal nuclease (thermonuclease)-like protein TERM 2117 1302215 - 1302242 + g 73 -8.4 -3.66658 | opp_overlap 1302215 1302214 1302218, overlap 1302218 ACACTTTATGACAAT CTACCGCTTTCT CTTT AGCAAGCGGTCG TGTTTTAGCCCTATT TERM 2118 1302784 - 1302803 + r 71 -7.9 -3.60818 | opp_overlap 1302784 ATACAAAATAAAAAA GTGTAGG TATTAC CCTACAC TTTAACAGATTTTCA TERM 2119 1302803 - 1302784 - R 100 -7.9 -5.8901 | opp_overlap 1302784 ATACAAAATAAAAAA GTGTAGG TATTAC CCTACAC TTTAACAGATTTTCA APL_1127 1304203 - 1302836 - | Na+/alanine symporter TERM 2120 1304584 - 1304595 + r 79 -4.4 -5.33848 | opp_overlap 1304564 AAAACATATTTTTAA GCAA ACGT TTGC TTTTTTGCTTATAGT TERM 2121 1304659 - 1304631 - R 100 -9.5 -5.5074 | opp_overlap 1304631 CAATCCAATAAAAAA GCGACCGCTGTTA TGA TATCGGCGATCGC TTTTTCACCTTTAAC TERM 2122 1304631 - 1304659 + r 100 -9.5 -4.70879 | opp_overlap 1304631 CAATCCAATAAAAAA GCGACCGCTGTTA TGA TATCGGCGATCGC TTTTTCACCTTTAAC APL_1128 1305722 - 1304670 - | membrane protein TERM 2123 1305038 - 1305028 - G 75 -3.2 -5.18357 | TAATTCAGTAAAAAA GCAA GTG TCGC CCAAAGCACCGCATA TERM 2124 1305807 - 1305786 - R 100 -13.1 -4.56367 | CATTGCATAAACAAA GAGGCGATT ATTC AATCGCCTC TCCCATGATTACTTA APL_1129 1306190 - 1305816 - | hypothetical protein TERM 2125 1307633 - 1307643 + G 73 -5.4 -4.59773 | CAGGACTTGGTGACG GACA TTT TGTC TTTTTAGACGTACCA APL_1130 1306339 - 1307736 + | putative protease TERM 2126 1307856 - 1307873 + F 100 -8.4 -5.90231 | opp_overlap 1307853 CCATAATAAATTTCA CCCCTC AGGAAC GAGGGG TTTTTTTATGTTTAT APL_1131 1307881 - 1309230 + | hypothetical protein kdtA 1309230 - 1310510 + | 3-deoxy-D-manno-octulosonic-acid transferase coaD 1310512 - 1310988 + | phosphopantetheine adenylyltransferase orn 1310991 - 1311545 + | oligoribonuclease TERM 2127 1311608 - 1311591 - g 70 -5.6 -4.25104 | opp_overlap 1311596, overlap 1311596 TTTTCCCGATGAAAA CCGAAT GTTGCA ATTCGG GCAACAATTTGCCAA TERM 2128 1311656 - 1311667 + G 70 -5.8 -4.32678 | TTGAACAAGATTCCG CGCA TTGT TGCG TTATTTATTTAAACG APL_1135 1311553 - 1312044 + | hypothetical protein TERM 2129 1313041 - 1313031 - g 70 -5.4 -4.4267 | GGCGAAAAGTTAAAA GAAG AAT CTTC GTCTAAACGCCCGGA amiB 1312068 - 1313213 + | putative N-acetylmuramoyl-L-alanine amidase AmiB precursor TERM 2130 1313221 - 1313262 + T 100 -16.2 -3.45768 | opp_overlap 1313221 TACGGTAAAAATAAA TAGCGGTCATTTTTACAA AATAAA TTGCAAAAATGACCGCTA TTGCTTGGTATTAAA TERM 2131 1313262 - 1313221 - T 100 -18.4 -4.87389 | opp_overlap 1313221 TACGGTAAAAATAAA TAGCGGTCATTTTTACAA AATAAA TTGCAAAAATGACCGCTA TTGCTTGGTATTAAA pgi 1314932 - 1313292 - | glucose-6-phosphate isomerase TERM 2132 1314657 - 1314639 - G 86 -11.8 -3.11955 | opp_overlap 1314636 1314654, overlap 1314653 AGAACGATTACGTAA TGCGGTAT GCA ATACCGCA CGATTCTCCGTACGA APL_1138 1315220 - 1314969 - | hypothetical protein TERM 2133 1315297 - 1315283 - R 73 -4.4 -4.96468 | TAAAGCTAAAGAAAA TAATAA GGA TTATTA AGTATAAATCAAAAA TERM 2134 1315446 - 1315432 - R 93 -4.3 -6.09196 | opp_overlap 1315432 CCCAAAAGAAAAAAA CTAAC TTAAC GTTAG CTTATTCGGTGTGAT TERM 2135 1315569 - 1315555 - R 93 -4.3 -6.09196 | opp_overlap 1315555 CCCAAAAGAAAAAAA CTAAC TTAAC GTTAG CTTATTCGGTGTGAT aroE 1316855 - 1316031 - | shikimate 5-dehydrogenase APL_1140 1317416 - 1316862 - | hypothetical protein TERM 2136 1317129 - 1317175 + g 70 -8.1 -3.5936 | gap 1, opp_overlap 1317128 CAAATATTGAGGAAC CGCCTTTTTAGCGGGC-ATTAC CCAA GTAATCGCTCGTTCCGAAGGCG TTTCAAAAATTTGCC TERM 2137 1317355 - 1317340 - G 78 -9 -3.82083 | GGATTACAACCTAAA CCGAAG ACCG CTTCGG TAGGATAAGCAACCA APL_1141 1318247 - 1317939 - | hypothetical protein recX 1318695 - 1318240 - | regulatory protein RecX TERM 2138 1318392 - 1318380 - G 82 -7.7 -4.56597 | GTTTTTTCTCAAAAA CTTGC TCG GCAAG TATAAACCAATCAAT TERM 2139 1318763 - 1318728 - R 100 -14.2 -5.82281 | opp_overlap 1318732, overlap 1318732 AAATATATAAAAAAA CAAATGCGGTTTCTAC CTTC GCAGAAACCGCATTTT TATTATAGTTCTTCT TERM 2140 1318732 - 1318759 + r 100 -12.8 -5.24416 | opp_overlap 1318732 1318728 ATATAAAAAAACAAA TGCGGTTTCTAC CTTC GCAGAAACCGCA TTTTTATTATAGTTC TERM 2141 1318759 - 1318732 - R 100 -15 -5.29742 | opp_overlap 1318732, overlap 1318728 ATATAAAAAAACAAA TGCGGTTTCTAC CTTC GCAGAAACCGCA TTTTTATTATAGTTC recA 1319896 - 1318766 - | recombinase A TERM 2142 1318813 - 1318848 + g 78 -4 -5.09173 | gap 1 CAAAGTCATTCACAT CATCGGCATCTAGCACA TTT TGTTC-ACCTGCCGATG TTTTTTCCGGTGTTG TERM 2143 1319941 - 1319929 - R 75 -4.8 -5.00884 | opp_overlap 1319929 ACTTTTCTGAAAAAA CGAC CGCTT GTCG TCAATTAACTGTGTA APL_1144 1320600 - 1320010 - | hypothetical protein pabB 1321561 - 1320593 - | para-aminobenzoate synthase component I TERM 2144 1321520 - 1321505 - G 70 -2.6 -4.97312 | overlap 1321511 AAAATCAATTAAAAA GAAAAA CGGG CTTTTC TGTTGCCCGAGTTGA TERM 2145 1321529 - 1321511 - G 91 -4.5 -5.67529 | overlap 1321505 AATTAAAAAGAAAAA CGGGC TTTTCTGTT GCCCG AGTTGATTGGCGGTT TERM 2146 1322114 - 1322103 - g 73 -5.8 -4.46267 | ACAATTTAATCAAAA TGCG CTTT CGCA TAAAGAACGTGAAAG TERM 2147 1322543 - 1322525 - g 71 -3.1 -4.91987 | AAGGTAACAATAAAA TCGCC GGTAATTGG GGCGA AGTACAGCTTGAATC rmuC 1321696 - 1323330 + | DNA recombination protein RmuC-like protein trpG 1323314 - 1323898 + | para-aminobenzoate synthase component II APL_1148 1324003 - 1324452 + | putative periplasmic protein TERM 2148 1324466 - 1324521 + F 70 -3.6 -4.98522 | gap 1, opp_overlap 1324473 1324493, overlap 1324470 1324473 AACTTTTCCTCTTGA TAAAT-AAGCGGTCATTTTTTTAGTAA ATT TTGTTACAAAATCGACCGCTTTATTTG TTTTTATCTCCAATT TERM 2149 1324473 - 1324513 + F 77 -5.5 -4.96845 | opp_overlap 1324473 1324493, overlap 1324470 1324466 CCTCTTGATAAATAA GCGGTCATTTTTTTAGTAA ATT TTGTTACAAAATCGACCGC TTTATTTGTTTTTAT TERM 2150 1324810 - 1324786 - g 100 -12.3 -3.57406 | opp_overlap 1324784, overlap 1324784 1324787 CTTTGACGAGAAAGA CGAAGCGATTT TCA AAATCGCTTCA AGCCTACGTTCGGAA TERM 2151 1324809 - 1324787 - g 93 -13.6 -2.74122 | opp_overlap 1324784, overlap 1324786 1324784 TTTGACGAGAAAGAC GAAGCGATTT TCA AAATCGCTTC AAGCCTACGTTCGGA aspS 1324625 - 1326400 + | aspartyl-tRNA synthetase TERM 2152 1326863 - 1326889 + G 82 -8 -4.57569 | opp_overlap 1326859 1326864, overlap 1326864 1326865 ATTGCAAAATATTTA ACTCCCCTCTTT AGA AAAGAGGGGAAC TTTTTCAAAACATAA TERM 2153 1326888 - 1326864 - g 100 -13.7 -3.28785 | opp_overlap 1326863 1326864 1326865, overlap 1326859 TTGCAAAATATTTAA CTCCCCTCTTT AGA AAAGAGGGGAA CTTTTTCAAAACATA TERM 2154 1326864 - 1326888 + G 86 -11.5 -3.3422 | opp_overlap 1326864 1326859, overlap 1326863 1326865 TTGCAAAATATTTAA CTCCCCTCTTT AGA AAAGAGGGGAA CTTTTTCAAAACATA TERM 2155 1326865 - 1326887 + G 100 -15 -2.60211 | opp_overlap 1326864 1326859, overlap 1326864 1326863 TGCAAAATATTTAAC TCCCCTCTTT AGA AAAGAGGGGA ACTTTTTCAAAACAT ntpA 1326434 - 1326904 + | dATP pyrophosphohydrolase APL_1151 1326928 - 1327668 + | hypothetical protein TERM 2156 1327680 - 1327703 + F 100 -14 -5.18357 | CTAATTTCTTGCCCT TAAGCCAACC TTTC GGTTGGCTTA TTTTTTAGTAACTTA TERM 2157 1327948 - 1327964 + G 78 -9.4 -3.60627 | opp_overlap 1327937, overlap 1327939 AAAAGACGGTGCTTC CGCCGT ATCTA ACGGCG TTTCAAATACGGTGA APL_1152 1327802 - 1328326 + | hypothetical protein TERM 2158 1328345 - 1328388 + F 100 -24.2 -4.4959 | opp_overlap 1328348 ATTGATTCGTTTAGA TAAGCGGGCGGATTTGTAAA ATTT TTTGCAAATCCGCCCGCTTG TTTTCATTCATTGGA TERM 2159 1328385 - 1328348 - f 100 -21.5 -3.48593 | opp_overlap 1328345 GATTCGTTTAGATAA GCGGGCGGATTTGTAAA ATTT TTTGCAAATCCGCCCGC TTGTTTTCATTCATT TERM 2160 1328922 - 1328911 - g 78 -5.8 -4.76041 | overlap 1328900 CAGAGCGACCAAAAA GTCG GTAG CGAC AAAGAACAAATCCTC ruvC 1328410 - 1328988 + | Holliday junction resolvase TERM 2161 1328996 - 1329019 + T 90 -11.2 -3.63627 | opp_overlap 1328996 AAGGGTAAAAATAAA GAGTAATCAA TCGC TTGATTACTC TTTCCGCTCTAAGGA TERM 2162 1329019 - 1328996 - T 100 -11.2 -4.88293 | opp_overlap 1328996 AAGGGTAAAAATAAA GAGTAATCAA TCGC TTGATTACTC TTTCCGCTCTAAGGA TERM 2163 1329042 - 1329065 + T 84 -5.2 -5.39755 | gap 1 TCTAAGGATTTTTTT CGGTAGCCGGC TGA GTCG-CTTCCG TTTTTTCTACTTCTG APL_1154 1330542 - 1329028 - | putative zinc protease TERM 2164 1330622 - 1330667 + r 100 -15 -4.386 | opp_overlap 1330617 TAACAAATAATTGTC GCAAGCGGTCTAATTTGC CTATTTTTTT GCAAATTAAACCGCTTGC TTTTATGAAAAATTA metE 1332973 - 1330700 - | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase TERM 2165 1333175 - 1333132 - H 100 -17.1 -5.72616 | opp_overlap 1333135 ATCTATATAAAAAAA CAAGCGGTCAAATTTGCAT TTTTTT ATACAAATTTGACCGCTTA AATCATTTATCACAT TERM 2166 1333135 - 1333172 + H 95 -14.4 -3.17798 | opp_overlap 1333132 TATATAAAAAAACAA GCGGTCAAATTTGCAT TTTTTT ATACAAATTTGACCGC TTAAATCATTTATCA TERM 2167 1334467 - 1334449 - H 79 -9.6 -3.27476 | ACCGCTAATCACTAA TGCGACTA AAG TAGCCGCA CCCATAGGCATTGCT metR 1334889 - 1335818 + | HTH-type transcriptional regulator MetR TERM 2168 1335837 - 1335874 + T 95 -12.3 -3.77087 | gap 1, opp_overlap 1335837 1335871 TGAATAAAATTAAAA GCGGTAGAATTTGT-TAA AAT TTATACAAAATCTACCGC TTTGCGTATTAAATC TERM 2169 1335874 - 1335837 - T 100 -12.3 -4.78029 | gap 1, opp_overlap 1335837, overlap 1335871 TGAATAAAATTAAAA GCGGTAGAATTTGT-TAA AAT TTATACAAAATCTACCGC TTTGCGTATTAAATC APL_1159 1336777 - 1335896 - | hypothetical protein TERM 2170 1336734 - 1336704 - G 72 -7.6 -3.76169 | TTAATATCAATAGAA TGGTTCTTACTGCC ACA AGCGGTAATAACCA ATCCGGCTAATAAAG TERM 2171 1336894 - 1336874 - R 93 -8.4 -5.56264 | opp_overlap 1336874 TGTAAAGATAAAAAA GCCAATAT TTCTC ATATTGGC TTATCTAGGTTTGTT TERM 2172 1336874 - 1336894 + r 73 -8.4 -3.59471 | opp_overlap 1336874 TGTAAAGATAAAAAA GCCAATAT TTCTC ATATTGGC TTATCTAGGTTTGTT rluB 1337959 - 1336910 - | ribosomal large subunit pseudouridine synthase B TERM 2173 1337918 - 1337936 + g 100 -11.8 -5.64421 | opp_overlap 1337917 1337916 ATTTTTAGAAAATTT TGCCGATT TCG AATCGGCA TTTTTTGTTTGAAAT TERM 2174 1337974 - 1337987 + r 72 -8.1 -3.37755 | overlap 1337972 TTAAGATTCCTTTGT CGCTC TCAC GAGCG TCTTTAAAAATATAT APL_1161 1338648 - 1338031 - | hypothetical protein TERM 2175 1338672 - 1338694 + r 85 -9.2 -4.02093 | opp_overlap 1338672 ATCCTTCGAAAAAAA TGTTGGTGCA TTA TACACCAACA TTCTTATATTCTCTA TERM 2176 1338694 - 1338672 - R 100 -11.4 -5.40474 | opp_overlap 1338672 ATCCTTCGAAAAAAA TGTTGGTGCA TTA TACACCAACA TTCTTATATTCTCTA APL_1162 1340088 - 1339192 - | hypothetical protein TERM 2177 1339238 - 1339248 + g 73 -8.2 -3.73224 | opp_overlap 1339235 1339238 1339246 GCAAAATAGTAACTA CCGG AAA CCGG TTTAGTAAACCCTAA TERM 2178 1340620 - 1340644 + G 71 -4.9 -4.59773 | overlap 1340612 1340622 ACTAGCACCGTGTTT GACGGTTTACG TTG TGTGAGCCGAC TTTTTGCCGATAAAG TERM 2179 1341598 - 1341583 - g 80 -4.6 -5.16841 | opp_overlap 1341594 1341594, overlap 1341585 GTAGAGCAACAAAAA CGCCAC AGTT ACGGCG GTGCTGTCGGTTACT trpE 1340248 - 1341798 + | anthranilate synthase component I trpG 1341812 - 1342399 + | anthranilate synthase component II trpD 1342456 - 1343460 + | anthranilate phosphoribosyltransferase TERM 2180 1343467 - 1343482 + F 100 -10.4 -5.252 | opp_overlap 1343465 TATCAGTAACATATC GCCCAC ATTT GTGGGC TTTTTTATAGGAATA TERM 2181 1344026 - 1344010 - g 70 -3.7 -4.88129 | AAAAATGAGCAAAAA CAACAAG TTG CTTATCG TTTAAATTTCTATCG APL_1166 1343503 - 1344258 + | putative ubiquinone/menaquinone biosynthesis methyltransferase TERM 2182 1344278 - 1344255 - T 95 -6.8 -5.81412 | GGCAGTTAAAAAAAA TTAAGCAGCC AATC AACTGCTTAA TACTCCTTATGAAAG APL_1167 1345370 - 1344285 - | hypothetical protein TERM 2183 1344402 - 1344418 + g 70 -7.9 -3.69354 | overlap 1344403 GGTTTCTTTTGCTTT AGCCGGT TCT ACCGGCG TTTCCGATTCTAACG TERM 2184 1344403 - 1344417 + g 81 -11.4 -2.81291 | overlap 1344402 GTTTCTTTTGCTTTA GCCGGT TCT ACCGGC GTTTCCGATTCTAAC APL_1168 1345566 - 1345781 + | hypothetical protein TERM 2185 1345847 - 1345826 - T 100 -13.1 -5.80248 | opp_overlap 1345826 TAATATATAAAAAAA TACCCAGCT AAAA AGCTGGGTA TTTCAGTTAATCATT TERM 2186 1345826 - 1345847 + T 95 -13.1 -3.79445 | opp_overlap 1345826 TAATATATAAAAAAA TACCCAGCT AAAA AGCTGGGTA TTTCAGTTAATCATT rplI 1346319 - 1345870 - | 50S ribosomal protein L9 priB 1346913 - 1346539 - | primosomal replication protein N rpsF 1347262 - 1346888 - | 30S ribosomal protein S6 TERM 2187 1347515 - 1347526 + H 73 -4.4 -4.87052 | TTCTAGTACAATTAC GCAA ACGT TTGC TTTTATTAATTTATA TERM 2188 1347701 - 1347686 - g 74 -4.6 -4.88711 | opp_overlap 1347699, overlap 1347687 AGAAGATATCAAAAA TGTGGC GATA GCCGCA ACCGATGTTCCCGCA purD 1347552 - 1348838 + | phosphoribosylamine--glycine ligase TERM 2189 1348911 - 1348866 - T 100 -13.5 -5.27779 | opp_overlap 1348867, overlap 1348867 GCTAACAGCAAAAAA TCAAGCGGTCTAATTGGTAAA ATAT TTTGCAAATTAGACCGCTTGT TATTTGTTGATAAAA TERM 2190 1348910 - 1348867 - T 100 -17 -3.75583 | opp_overlap 1348867, overlap 1348866 CTAACAGCAAAAAAT CAAGCGGTCTAATTGGTAAA ATAT TTTGCAAATTAGACCGCTTG TTATTTGTTGATAAA TERM 2191 1348867 - 1348910 + T 100 -19.2 -4.24413 | opp_overlap 1348867 1348866 CTAACAGCAAAAAAT CAAGCGGTCTAATTGGTAAA ATAT TTTGCAAATTAGACCGCTTG TTATTTGTTGATAAA pnuC 1349622 - 1348930 - | nicotinamide mononucleotide transporter TERM 2192 1349743 - 1349722 - R 100 -10.9 -5.90231 | opp_overlap 1349722 ATAAATATAAAAAAA TAGGGCTGC ACAA ACAGCCCTA TTTCGATTATAGATT TERM 2193 1349722 - 1349743 + r 87 -10.2 -3.81741 | opp_overlap 1349722 ATAAATATAAAAAAA TAGGGCTG CACAAA CAGCCCTA TTTCGATTATAGATT APL_1174 1350373 - 1349750 - | hypothetical protein hisS 1351630 - 1350389 - | histidyl-tRNA synthetase ispG 1352900 - 1351788 - | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase TERM 2194 1351821 - 1351840 + g 78 -5.8 -4.87893 | gap 1, overlap 1351817 1351815 AATTCGATTGTGTTG TTCG-GCAA CTC TTGCTCGAA TTTTTGCTTCCAGTT TERM 2195 1352041 - 1352029 - G 70 -7.7 -3.58731 | opp_overlap 1352028 1352029 AAAATATCTTCCAAA CGTTG TTC CAACG CATTTACCGTAGCAA TERM 2196 1352833 - 1352816 - G 73 -8.4 -3.65902 | overlap 1352817 TCGACTGCACCGAAA TCGGCG CATCGC CGCCGA CTGCGACATTCCCCA TERM 2197 1352829 - 1352817 - G 75 -10.5 -2.79327 | overlap 1352816 CGACTGCACCGAAAT CGGCG CAT CGCCG CCGACTGCGACATTC APL_1177 1353878 - 1352910 - | hypothetical protein APL_1178 1354158 - 1355714 + | putative integral membrane sulfate transporter TERM 2198 1355789 - 1355835 + T 100 -18.3 -3.22951 | opp_overlap 1355790, overlap 1355790 1355793 GTAGGCTACAAATAA ACAAGCGGTCTGATTTTGCAA ATTTC TTACAAAATCAGACCGCTTGA TCTTATCCAAATCTC TERM 2199 1355834 - 1355790 - T 100 -24.7 -4.56367 | opp_overlap 1355790 1355789 1355793 TAGGCTACAAATAAA CAAGCGGTCTGATTTTGCAAA TTT CTTACAAAATCAGACCGCTTG ATCTTATCCAAATCT TERM 2200 1355790 - 1355834 + T 100 -21.8 -2.53449 | opp_overlap 1355790, overlap 1355789 1355793 TAGGCTACAAATAAA CAAGCGGTCTGATTTTGCAA ATTTC TTACAAAATCAGACCGCTTG ATCTTATCCAAATCT TERM 2201 1355793 - 1355831 + T 100 -17.7 -3.41745 | opp_overlap 1355790, overlap 1355790 1355789 GCTACAAATAAACAA GCGGTCTGATTTTGCAA ATTTC TTACAAAATCAGACCGC TTGATCTTATCCAAA TERM 2202 1355937 - 1355915 - T 84 -8.4 -4.46531 | AAGTAAAAAATTAAA GGCACTCGTC AAA GACTAGTACC ATCACAAAGTGTTCT argH 1357399 - 1356023 - | argininosuccinate lyase TERM 2203 1356799 - 1356789 - G 73 -8.2 -3.68569 | CGATCGATTGAATAA GCCG TAC CGGC TAATGCGCCTGAACC TERM 2204 1357625 - 1357662 + r 93 -12.9 -3.47345 | opp_overlap 1357625 TTAGCAAAACAAAAA GCGGTGAAATTTGCAAA ATAT TTTACAAATTCCACCGC TTGTCATCTCAAATT TERM 2205 1357662 - 1357625 - R 100 -17.3 -5.50723 | opp_overlap 1357625 TTAGCAAAACAAAAA GCGGTGAAATTTGCAAA ATAT TTTACAAATTCCACCGC TTGTCATCTCAAATT APL_1180 1358725 - 1357682 - | oxidoreductase TERM 2206 1359019 - 1359045 + G 81 -7.2 -4.61231 | overlap 1359021 GTGTGGTAGCTTTAT TAGGGGCGGCAA TTA TTGCCGTACCGA TTTTTAAACGTATCG TERM 2207 1359021 - 1359043 + G 71 -9.8 -2.61272 | overlap 1359019 GTGGTAGCTTTATTA GGGGCGGCAA TTA TTGCCGTACC GATTTTTAAACGTAT TERM 2208 1360159 - 1360147 - g 70 -2.7 -5.00616 | CTCGTTTGCAAAAAA TTGAC GAA ATCAA ACCGCATGATCATAT kefB 1358973 - 1360778 + | glutathione-regulated potassium-efflux system protein TERM 2209 1360826 - 1360788 - f 85 -10.4 -3.43217 | opp_overlap 1360788, overlap 1360797 GAGTAATATTTACAA GCGGTTAAATTTTGCAAA AAG TTGGCGAATTTTAACCGC TTTTTATTCCCTATT TERM 2210 1360788 - 1360826 + F 100 -12.6 -5.12971 | opp_overlap 1360788 1360797 GAGTAATATTTACAA GCGGTTAAATTTTGCAAA AAG TTGGCGAATTTTAACCGC TTTTTATTCCCTATT TERM 2211 1361470 - 1361449 - g 78 -10.2 -3.254 | opp_overlap 1361449, overlap 1361447 TATGCAGTTAGAAGA CAGCGACA AAGCCA TGTCGCTG TTTTTAAAATATGGC TERM 2212 1361449 - 1361470 + G 100 -10.2 -4.64766 | opp_overlap 1361449 1361447 TATGCAGTTAGAAGA CAGCGACA AAGCCA TGTCGCTG TTTTTAAAATATGGC APL_1182 1360973 - 1362181 + | hypothetical protein APL_1183 1362278 - 1363678 + | hypothetical protein APL_1184 1363681 - 1364178 + | hypothetical protein APL_1185 1364192 - 1364836 + | hypothetical protein TERM 2213 1364879 - 1364851 - T 100 -13.3 -5.38497 | opp_overlap 1364847 ACTGAAATTAAAAAA TGCCGTCTGAA TCCCATT TTCAGACGGCA TGCCTACTTTACAAG APL_1186 1365951 - 1365058 - | putative transcriptional regulator TERM 2214 1365113 - 1365098 - G 81 -5.4 -5.14563 | TCTTCCACTAAAAAA TCCACA AAGC TGCGGA CGGTTTGAGGGAGTT TERM 2215 1365626 - 1365614 - G 71 -3.3 -5.00616 | overlap 1365615 TGTTTGGCTAAAAAA GTGCG AAT CGCAT TGAGCAAATGGGTGC APL_1187 1366076 - 1366528 + | hypothetical protein TERM 2216 1366572 - 1366560 - T 76 -6.3 -4.58283 | CAAGCGGTCGAAAAA CCAAA AAG TTTGG GATAGTGGACAAAAT APL_1188 1367283 - 1366651 - | hypothetical protein TERM 2217 1367608 - 1367572 - H 100 -12.5 -4.84359 | opp_overlap 1367572 1367583 TCATTTTTATAAAAA GTGGATTAAAGCCTTAT AGT ACAAGGTTTTAACCCAC TTTGTAGACTCAATT TERM 2218 1367572 - 1367608 + H 93 -10.3 -3.9009 | opp_overlap 1367572, overlap 1367583 TCATTTTTATAAAAA GTGGATTAAAGCCTTAT AGT ACAAGGTTTTAACCCAC TTTGTAGACTCAATT APL_1189 1367935 - 1368357 + | hypothetical protein TERM 2219 1368459 - 1368441 - T 71 -7.5 -3.56346 | overlap 1368439 AGAATATAAAAGACA TTTTGGG GTAAG CCCAAAA GGAGATGCGAGCTAG APL_1190 1369432 - 1368533 - | putative transcriptional regulator LysR-like protein TERM 2220 1369604 - 1369644 + G 78 -7.1 -4.4715 | opp_overlap 1369612 GTGATGCCGCCGATG TGCCAAT-ATTCGGCAACA GACGG TGT-GCCGAACGATTGGCA TTTTGTGCATTACAC namA 1369523 - 1370584 + | NADPH dehydrogenase TERM 2221 1370600 - 1370630 + F 100 -13.5 -6.28967 | opp_overlap 1370600 TTAACGTCTATACAA GCGGTGTAAAAAG AAGCA TTTTTTACACCGC TTTTTTTTATTTATC TERM 2222 1370630 - 1370600 - f 93 -12.8 -3.50447 | opp_overlap 1370600 TTAACGTCTATACAA GCGGTGTAAAAA GAAGCAT TTTTTACACCGC TTTTTTTTATTTATC TERM 2223 1371676 - 1371656 - g 87 -6.1 -5.15167 | TACGATGAACAAAAA CAAGCGAAA TCT TACCGCTTG TTAAAAGAAATCGTA APL_1192 1370654 - 1371703 + | hypothetical protein TERM 2224 1371885 - 1371906 + T 100 -10.9 -4.09685 | gap 1, overlap 1371886 TCGGTAGTCATGGTA G-GGACGCAC TGT GTGCGTCCTC TTTTCCACCCTAGAC TERM 2225 1371886 - 1371904 + T 100 -14.6 -3.64716 | overlap 1371885 CGGTAGTCATGGTAG GGACGCAC TGT GTGCGTCC TCTTTTCCACCCTAG APL_1193 1373130 - 1371916 - | putative type I restriction-modification system, S subunit APL_1194 1374797 - 1373145 - | type I restriction-modification system, M subunit TERM 2226 1373573 - 1373605 + g 79 -3.3 -5.40004 | opp_overlap 1373573, overlap 1373566 CTGTGGTGGCGAAAA TGTTAGACGGCATCG ACA CCACGCCCGCTAACA TTTTTTCGTTTACTA APL_1195 1376674 - 1374794 - | hypothetical protein TERM 2227 1375164 - 1375174 + g 78 -4 -5.10933 | opp_overlap 1375164 1375165, overlap 1375165 TTTATCCGATCATAA TCAA AAT TTGA TTTTGTTTTGACTAA TERM 2228 1375295 - 1375314 + g 100 -9.4 -4.59089 | TTCTCGCCCTGTGTA TTGTGGAA TGCC TTCCACAA TTTGTTTATGGCTTG TERM 2229 1376346 - 1376362 + g 73 -7.3 -4.09243 | opp_overlap 1376348, overlap 1376348 TCTGCACGGCGAATA TAGGTTG CAA CAACCTG TTTTCCCCGAATATC TERM 2230 1376348 - 1376360 + g 70 -7.7 -3.6422 | opp_overlap 1376348, overlap 1376346 TGCACGGCGAATATA GGTTG CAA CAACC TGTTTTCCCCGAATA APL_1196 1379810 - 1376676 - | type I restriction enzyme, R subunit TERM 2231 1377526 - 1377508 - G 71 -6.8 -4.11216 | opp_overlap 1377508 TTTTCAGTTTCAAAA TCAAAAAG TAC CTCTTTGA TTTGAGCGATGTCTT TERM 2232 1377834 - 1377816 - G 70 -5.3 -4.45117 | opp_overlap 1377823 CATATTGTAAACAAA CAGCAAA TCGGT TTTGCCG GCTTTGTAATCGTCC TERM 2233 1379706 - 1379693 - G 70 -3.9 -4.75404 | AAATCTCACCAAAAA TGTTA TTGC TAACA TCCCATTGCGCTGTT TERM 2234 1379882 - 1379904 + r 100 -9.1 -4.67048 | opp_overlap 1379882 TCAGAATATAAAAAA CGCCGTCAG TTTAT CTGACAGCG TTTCTTTTCAAATAA TERM 2235 1379904 - 1379882 - R 100 -11.3 -5.5208 | opp_overlap 1379882 TCAGAATATAAAAAA CGCCGTCAG TTTAT CTGACAGCG TTTCTTTTCAAATAA APL_1197 1380792 - 1379926 - | 3-hydroxyacid dehydrogenase TERM 2236 1380868 - 1380856 - H 71 -7.7 -3.57561 | opp_overlap 1380855 TTTTAAGGTTGTAAA CGCTT AAA AAGCG ACTTTCTAACATAAA APL_1198 1381046 - 1381708 + | putative NAD(P)H nitroreductase TERM 2237 1381757 - 1381721 - f 86 -12.5 -2.76708 | opp_overlap 1381726, overlap 1381726 TAATCCACACATAAC GAAAACGGTATGAGATC CCT GATTTCATACCGTTTTT ACTTATTTATTTCCC TERM 2238 1381752 - 1381726 - f 100 -12.4 -4.5464 | opp_overlap 1381726, overlap 1381721 CACACATAACGAAAA CGGTATGAGATC CCT GATTTCATACCG TTTTTACTTATTTAT TERM 2239 1381726 - 1381752 + F 100 -14.6 -5.05712 | opp_overlap 1381721 1381726 CACACATAACGAAAA CGGTATGAGATC CCT GATTTCATACCG TTTTTACTTATTTAT APL_1199 1381862 - 1382479 + | hypothetical protein TERM 2240 1382499 - 1382537 + T 83 -7.6 -4.67755 | opp_overlap 1382497 1382502, overlap 1382502 CTAGTAATATAAACG GAAGCGGTAGTAAATT TTTAGGT AATTTACCACCGCTTG TTTTTAAATAGGTAT TERM 2241 1382534 - 1382502 - T 89 -11.5 -3.37881 | opp_overlap 1382502 1382499, overlap 1382497 GTAATATAAACGGAA GCGGTAGTAAATT TTTAGGT AATTTACCACCGC TTGTTTTTAAATAGG TERM 2242 1382502 - 1382534 + T 93 -9.3 -4.44608 | opp_overlap 1382497 1382502, overlap 1382499 GTAATATAAACGGAA GCGGTAGTAAATT TTTAGGT AATTTACCACCGC TTGTTTTTAAATAGG APL_1200 1383007 - 1382582 - | putative DNA mismatch endonuclease APL_1201 1384675 - 1383014 - | hypothetical protein APL_1202 1385785 - 1384691 - | modification methylase TERM 2243 1385421 - 1385405 - G 83 -9.5 -3.93367 | overlap 1385403 1385410 TCCCGGAACAAAATA TTCAACG AAT CGTTGAA ATTCGGACAGTAGGC APL_1203 1386211 - 1386774 + | hypothetical protein TERM 2244 1386835 - 1386777 - T 100 -15 -4.56736 | opp_overlap 1386787 1386806 ATTTAATAACTAAAA TCACAAACAAGCGGTCAAAATTTGCAAA TTT TTTGTAAAATTTAACCGCTTACTTGTAA TCAGTATTCTTCTTA TERM 2245 1386787 - 1386825 + T 89 -11.2 -3.4759 | opp_overlap 1386777, overlap 1386806 TAAAATCACAAACAA GCGGTCAAAATTTGCAAA TTT TTTGTAAAATTTAACCGC TTACTTGTAATCAGT APL_1204 1387705 - 1386848 - | esterase APL_1205 1388524 - 1387841 - | putative glutathione S-transferase APL_1206 1389077 - 1388658 - | plasmid stability-like protein APL_1207 1389344 - 1389087 - | hypothetical protein TERM 2246 1389276 - 1389291 + g 79 -8.2 -4.24002 | opp_overlap 1389269 GGTGATAATTACAGG GGCGGT AAGT GCCGCC TTTTGAGCTTTGCCA TERM 2247 1389467 - 1389480 + r 85 -9.5 -4.01158 | opp_overlap 1389467 GTAGGAAAAACAAAA GGGGC TTAC GCCCC TTATTTAATGAAATT TERM 2248 1389480 - 1389467 - R 100 -9.5 -5.3104 | opp_overlap 1389467 GTAGGAAAAACAAAA GGGGC TTAC GCCCC TTATTTAATGAAATT adhC 1390612 - 1389494 - | putative alcohol dehydrogenase class 3 betT 1392794 - 1390767 - | putative choline-glycine betaine transporter TERM 2249 1392642 - 1392627 - G 77 -4.7 -4.91977 | GACTAAAATATAAAA CCAAC TGAAAT GTTGG AAAATTGTCGCTTTT TERM 2250 1392933 - 1392960 + H 72 -5 -4.7416 | opp_overlap 1392931, overlap 1392929 1392955 TAAAACTGATATACC TTAGCATAAGAT ATCA ATTTTATGCAAA TTTTTAGCATTTTAA TERM 2251 1393242 - 1393225 - g 74 -4.9 -4.77986 | opp_overlap 1393225 GGAAATACTGAAAAA TCCTCAA TATC TTGAAGA TCTCTGGCAACTTTA APL_1210 1393091 - 1393801 + | hypothetical protein TERM 2252 1394408 - 1394398 - g 71 -8.2 -3.55622 | overlap 1394406 CCGAATTGGTGGAAA GCGG AAA CCGC TCAACAACGACACGA APL_1211 1393801 - 1394637 + | hypothetical protein TERM 2253 1394695 - 1394652 - T 95 -9 -4.88795 | opp_overlap 1394655 ACGTAACAAAATAAA CAAGCGGTTAAATTCGCAAA TTTC TTTGTAAATCCGACCGCTTG TAAGCCAACTAGACA tehA 1395663 - 1394716 - | potassium-tellurite ethidium and proflavin transporter TERM 2254 1395244 - 1395224 - G 77 -6.1 -4.71426 | TTGGCACTAACAAAA TTCGCCGCC ACC AACGGCAAA TAAAGTACCGGTGTG TERM 2255 1395702 - 1395757 + r 72 -9.3 -2.55074 | gap 2, opp_overlap 1395706 GTTTTTCAAACCGAA TA-AATG-CGCAAGCGGTCGTAAATTT TGCC AGATTTACGACCGCTTGCGACAAAATG TAAATTAAAGTTGCG TERM 2256 1395752 - 1395706 - R 100 -20.5 -4.29326 | gap 1, opp_overlap 1395702 TTCAAACCGAATAAA TG-CGCAAGCGGTCGTAAATTT TGCC AGATTTACGACCGCTTGCGACA AAATGTAAATTAAAG APL_1213 1396412 - 1395762 - | hypothetical protein TERM 2257 1396566 - 1396546 - R 86 -6.2 -5.40072 | TTTTTTGCAAAAAAA TACCTTGC GATAT ACAAGGTA TAAAATAAACAGAAT TERM 2258 1396594 - 1396607 + r 78 -2.4 -5.72118 | overlap 1396585 AATCCGGCAGATTAT TGCT TCATAC AGCA TTTTTTGTATTTTTT APL_1214 1397213 - 1396650 - | hypothetical protein TERM 2259 1397296 - 1397253 - R 100 -17 -4.72029 | TCTAAGTGAATAAAA CAAGCGGTCAGATTTACAAA ATTT TCTACAAATCCGACCGCTTG CGATTAATGAATATC APL_1215 1399144 - 1397300 - | ABC transporter ATP-binding protein TERM 2260 1399068 - 1399055 - G 91 -8.1 -4.85782 | opp_overlap 1399054 1399055 CGCTTCAAAAATAAA CGGGA TTAT TCCCG ATTTGGGCGTTTTCG TERM 2261 1399189 - 1399163 - R 73 -4.4 -5.00884 | overlap 1399169 ACTTTCCTGAAAAAA CTAAAAGACGCC ATA AGCGTCTGTCAA AGATTAAAATATATT TERM 2262 1399183 - 1399169 - R 88 -7.8 -4.86862 | overlap 1399163 CTGAAAAAACTAAAA GACGCC ATA AGCGTC TGTCAAAGATTAAAA TERM 2263 1399238 - 1399219 - R 89 -7.2 -5.29445 | opp_overlap 1399219 1399221 1399237 TTTTAAGAAGAAAAA GACGTAAT AAAC ATTACGCC TTTTTGAAGGATTAT luxS 1399759 - 1399250 - | S-ribosylhomocysteinase TERM 2264 1399803 - 1399785 - R 82 -8.9 -3.94333 | opp_overlap 1399784 AATTTAAAACTTAAA GGGGTAA GGTGA TTACCCC ATATCTGAAATTATT APL_1217 1402480 - 1399814 - | hypothetical protein TERM 2265 1400694 - 1400715 + g 73 -5.8 -4.431 | opp_overlap 1400681, overlap 1400682 AGCTCGGCAGACACC GCCGGTTC AATCCA GAAACGGC TTTTATCACTGAGTA TERM 2266 1400938 - 1400948 + g 71 -4.6 -4.74103 | opp_overlap 1400938 CAACATCTTTATAAA GCGG ATA CTGC TTTTTCGCTTCGCCC TERM 2267 1402018 - 1402033 + g 72 -7.5 -3.94877 | opp_overlap 1402006, overlap 1402006 AATCGCCGTCGGTTA CCGCC ACTGTC GGCGG TTCTTCTTCCGCAAT TERM 2268 1402593 - 1402571 - R 100 -10.6 -4.76963 | opp_overlap 1402571 1402569 TTAGATAACACAAAA CCGAAGGCCT GCA AAACCTTCGG TATATGTCTGCTTTA fur 1403077 - 1402628 - | ferric uptake regulation protein fldA 1403630 - 1403106 - | flavodoxin FldA APL_1220 1403945 - 1403652 - | LexA regulated protein TERM 2269 1404143 - 1404127 - R 76 -2.9 -5.4588 | TAAAATTACAAAAAA CGGTAAA AAT TCGACCG CTTATTCCTCCTTAA APL_1221 1404621 - 1404145 - | hypothetical protein TERM 2270 1404384 - 1404402 + g 75 -7.4 -4.27584 | CCACTTTTTTCACGC CGAGCG CACTTGC CGCTCG TTTTAAATTCAAGGT TERM 2271 1405278 - 1405237 - g 88 -10.9 -3.86194 | opp_overlap 1405241 1405242 1405274, overlap 1405274 AACTTGCCGGACAAA CCGCACGTTTGTTAAACGG TATT CCGTTTGACGAAAATGCGG AACGTATCGCATTCG APL_1222 1404705 - 1405706 + | aspartate-semialdehyde dehydrogenase TERM 2272 1405716 - 1405741 + F 100 -11.2 -4.8743 | TATTAACTTTATCCG CTGCGGAACG TAAAAT CGTTCCGTAG TTTCTTTCTTTTACC APL_1223 1405767 - 1407062 + | putative inner membrane protein APL_1224 1407172 - 1407522 + | hypothetical protein TERM 2273 1407553 - 1407565 + F 77 -6.2 -4.64861 | overlap 1407548 TCGTGATCATCGGTG CCGG CGCAT CCGG TTTATTTTGCGCCGC TERM 2274 1408658 - 1408675 + F 80 -6.9 -4.48987 | overlap 1408672 1408673 CGGCTATAATTTCCA GTGGGCG TGGT CGTCCGC TTTTGCTTGTGCGGA TERM 2275 1408769 - 1408807 + F 100 -12.6 -4.64766 | opp_overlap 1408770, overlap 1408770 AAAAGGTTGGTAAAA AGTGGGTTAAAGCCTTAT AGT ACAAGGCTTTAACCTACC TTTTTGAAATATGAA TERM 2276 1408806 - 1408770 - f 100 -16.1 -4.58685 | opp_overlap 1408770 1408769 AAAGGTTGGTAAAAA GTGGGTTAAAGCCTTAT AGT ACAAGGCTTTAACCTAC CTTTTTGAAATATGA TERM 2277 1408770 - 1408806 + F 100 -16.1 -3.38378 | opp_overlap 1408770, overlap 1408769 AAAGGTTGGTAAAAA GTGGGTTAAAGCCTTAT AGT ACAAGGCTTTAACCTAC CTTTTTGAAATATGA TERM 2278 1409058 - 1409046 - g 70 -5.5 -4.45485 | opp_overlap 1409046, overlap 1409056 ACGATATTTAGAAAA GGCTC CTA AAGCC TTCTTAAAAGCCCCT APL_1227 1408957 - 1409745 + | hypothetical protein TERM 2279 1409863 - 1409840 - T 100 -11.8 -5.46657 | opp_overlap 1409840 TATGCCAACAAAAAA CGGAAGCTGA TTTC TCAACTTCCG TTTTTTGTTTTAAGC TERM 2280 1409840 - 1409863 + T 100 -9.6 -5.79595 | opp_overlap 1409840 TATGCCAACAAAAAA CGGAAGCTGA TTTC TCAACTTCCG TTTTTTGTTTTAAGC infA 1410103 - 1409885 - | translation initiation factor IF-1 TERM 2281 1410004 - 1410020 + g 74 -6.5 -4.5442 | TACCTGAAATATGTG CGGTAAC AAC GTGACCG TTTTCTAATTCCACA aphA 1410857 - 1410195 - | AphA-like protein TERM 2282 1410810 - 1410827 + g 70 -2.6 -4.93177 | overlap 1410812 GCATAACACGCTAAT TCCGGC GAGCAA GCCGAA TTTTATTAATTTTTC TERM 2283 1411300 - 1411279 - g 71 -10.1 -2.72344 | gap 1 CCGTATCGGCAATTA CCGCCAGCGC AAT GCGC-GGCGA ACTGGATTTTGAGCA serB 1410957 - 1411817 + | phosphoserine phosphatase TERM 2284 1411822 - 1411853 + F 100 -10.3 -4.30576 | TCTATGTATAATCCC GTCATGGCGAATA GCGATA TATTCGTCGTGAC TTTTAATAATAAGGA APL_1231 1411876 - 1412367 + | nucleotide-binding protein TERM 2285 1412627 - 1412655 + F 100 -10.4 -5.8187 | gap 1, opp_overlap 1412627 AGTCCTACTAATAAA TCCTCCCTGACTA ATTT TAG-CGGGGAGGA TTTTTTTATTCAGTG TERM 2286 1412655 - 1412627 - f 81 -8.2 -4.2461 | gap 1, opp_overlap 1412627 AGTCCTACTAATAAA TCCTCCCTGACTA ATTT TAG-CGGGGAGGA TTTTTTTATTCAGTG malP 1412721 - 1415120 + | maltodextrin phosphorylase TERM 2287 1415158 - 1415130 - T 71 -5.2 -4.63748 | overlap 1415133 1415134 AAATAACGAAAGAAA TAACCCTCGCTC TTTGT GGGCGAGGAGTA TCACTAGTGGGAGTA TERM 2288 1415155 - 1415133 - T 78 -6.9 -4.38369 | overlap 1415130 1415134 TAACGAAAGAAATAA CCCTCGCTC TTTGT GGGCGAGGA GTATCACTAGTGGGA TERM 2289 1415154 - 1415134 - T 70 -8.2 -3.21394 | overlap 1415133 1415130 AACGAAAGAAATAAC CCTCGCTC TTTGT GGGCGAGG AGTATCACTAGTGGG malT 1417901 - 1415184 - | HTH-type transcriptional regulator MalT TERM 2290 1417576 - 1417555 - G 71 -6.7 -4.16301 | AACTGAGAGAAATAA TCTACCAAA TTAT TTTGGTAAA CAATTCCGGAAAAAG TERM 2291 1417991 - 1417974 - R 100 -9.9 -6.23545 | TGGAAATAAAAAAAA CCACTGA AAAC TCAGTGG CAAAAGGATAAAGAT APL_1234 1418900 - 1418016 - | maltose regulon periplasmic protein TERM 2292 1418108 - 1418118 + g 73 -2.6 -5.22794 | overlap 1418114 AATTCATTGCTTTAC TAAT ATC ATTA TTTTTTAATGCTTGT TERM 2293 1418960 - 1418940 - R 100 -12.6 -3.91144 | GTTACATCGTATAAA GGGGCGTA ATACA TACGCCCC AAATGGCTCAATTAC lamB 1420242 - 1418968 - | maltoporin TERM 2294 1420306 - 1420288 - R 72 -6 -4.30576 | overlap 1420289 TTTTCATTATTAAAA TTTAAGGG AAA CCCTTAAG AACATTTATACGCCT TERM 2295 1420305 - 1420289 - R 77 -9.5 -3.18024 | overlap 1420288 TTTCATTATTAAAAT TTAAGGG AAA CCCTTAA GAACATTTATACGCC malK 1421451 - 1420312 - | maltose/maltodextrin transporter ATP-binding protein TERM 2296 1421480 - 1421494 + H 83 -7.2 -4.64992 | TCGCTTTAAATTTGT TACGTA GTT TACGTA TTTCTCTTTTTTCCA TERM 2297 1421585 - 1421619 + H 90 -11.6 -3.53224 | opp_overlap 1421585, overlap 1421572 TATTTTTTTGTGAAA CGGATCACAAAAAACA TCC TCTATTTTGTGATCCG TTTCACAAAAACATC TERM 2298 1421619 - 1421585 - H 90 -11.6 -3.53224 | opp_overlap 1421572 1421585 TATTTTTTTGTGAAA CGGATCACAAAAAACA TCC TCTATTTTGTGATCCG TTTCACAAAAACATC malE 1421783 - 1422967 + | maltose ABC transporter periplasmic protein TERM 2299 1424027 - 1424038 + G 78 -7.2 -4.55849 | TTAATTTTACCTTAC GCCG TACC CGGC TTTATTTCGATTTTA malF 1423046 - 1424596 + | maltose transporter membrane protein malG 1424647 - 1425537 + | maltose transporter permease TERM 2300 1425540 - 1425558 + F 82 -9.6 -3.53811 | opp_overlap 1425540 1425538 CGTAAAAGGATAACA TTGGAGGA GCC TCCTCCGA TTTGCAAAAAATAAA malQ 1425628 - 1427646 + | 4-alpha-glucanotransferase TERM 2301 1427678 - 1427644 - f 83 -7.5 -4.71307 | gap 2, opp_overlap 1427652 1427675, overlap 1427648 1427652 CAAAAACGAAATAAA TAAGGATATAGCCACAA AGA TTGTGGCTAT-TC-TTA TAAATTATAAGTTAT TERM 2302 1427675 - 1427648 - f 86 -10.8 -3.21394 | gap 1, opp_overlap 1427652, overlap 1427644 1427652 AACGAAATAAATAAG GATATAGCCACAA AGA TTGTGGCTAT-TC TTATAAATTATAAGT TERM 2303 1427672 - 1427652 - f 87 -12.7 -3.11207 | opp_overlap 1427652, overlap 1427648 1427644 AAATAAATAAGGATA TAGCCACAA AGA TTGTGGCTA TTCTTATAAATTATA TERM 2304 1427652 - 1427672 + F 95 -12.7 -3.85879 | opp_overlap 1427652 1427648 1427644 AAATAAATAAGGATA TAGCCACAA AGA TTGTGGCTA TTCTTATAAATTATA TERM 2305 1427818 - 1427807 - f 73 -7.2 -4.00084 | opp_overlap 1427807 1427806 ATTACTAAAATACAA CGCC TTTT GGCG ATTTGTGATTTCCAA TERM 2306 1427970 - 1427960 - g 75 -3.2 -5.10029 | ATTAACCCCAAAAAA GCAA CAC CTGC TTATACCATGAATGA APL_1241 1427864 - 1429450 + | hypothetical protein TERM 2307 1429471 - 1429489 + F 100 -13.2 -5.93252 | opp_overlap 1429471 ATTAAAACGTTAAAA GCGAGGAA AAT TTCCTCGC TTTTTTATTTTTAAC TERM 2308 1429489 - 1429471 - f 100 -13.2 -4.28651 | opp_overlap 1429471 ATTAAAACGTTAAAA GCGAGGAA AAT TTCCTCGC TTTTTTATTTTTAAC APL_1242 1429516 - 1430310 + | putative deoxyribonuclease TERM 2309 1430339 - 1430308 - T 91 -11.8 -3.86346 | opp_overlap 1430314 1430315, overlap 1430315 TTATTTTGGTATAAA TAAAAAACGGATAC CTTA GTATCCGCTTTTCA AATGATATAGCCTAC TERM 2310 1430314 - 1430333 + T 71 -6.4 -4.16279 | opp_overlap 1430308 1430315, overlap 1430315 TGGTATAAATAAAAA ACGGATAC CTTA GTATCCGC TTTTCAAATGATATA TERM 2311 1430332 - 1430315 - T 100 -9.9 -5.72622 | opp_overlap 1430314 1430315, overlap 1430308 GGTATAAATAAAAAA CGGATAC CTTA GTATCCG CTTTTCAAATGATAT TERM 2312 1430315 - 1430332 + T 77 -9.9 -3.09286 | opp_overlap 1430315 1430308, overlap 1430314 GGTATAAATAAAAAA CGGATAC CTTA GTATCCG CTTTTCAAATGATAT gor 1431739 - 1430369 - | glutathione reductase TERM 2313 1430680 - 1430664 - G 78 -10.1 -3.53012 | TGCGGTTCGGTTAAA CCGACCG TAC CGATCGG CGGATGGCTAAAGAT TERM 2314 1431794 - 1431766 - H 72 -6.1 -4.41158 | opp_overlap 1431771, overlap 1431771 TACATAAATAAAGAA TAAAAGCGGTT CAATTCT AACCGCTTTTG GTAAAAATGCATTAA TERM 2315 1431789 - 1431771 - H 83 -6 -5.10765 | opp_overlap 1431771, overlap 1431766 AAATAAAGAATAAAA GCGGTT CAATTCT AACCGC TTTTGGTAAAAATGC TERM 2316 1431858 - 1431896 + H 100 -12.6 -4.64766 | opp_overlap 1431859, overlap 1431859 AAAAGGTTGGTAAAA AGTGGGTTAAAGCCTTAT AGT ACAAGGCTTTAACCTACC TTTTTGAAATATGAA TERM 2317 1431895 - 1431859 - H 100 -16.1 -4.58685 | opp_overlap 1431858 1431859 AAAGGTTGGTAAAAA GTGGGTTAAAGCCTTAT AGT ACAAGGCTTTAACCTAC CTTTTTGAAATATGA TERM 2318 1431859 - 1431895 + H 100 -16.1 -3.38378 | opp_overlap 1431859, overlap 1431858 AAAGGTTGGTAAAAA GTGGGTTAAAGCCTTAT AGT ACAAGGCTTTAACCTAC CTTTTTGAAATATGA APL_1244 1432223 - 1432834 + | hypothetical protein APL_1245 1433441 - 1432923 - | hypothetical protein TERM 2319 1433012 - 1433025 + g 78 -2.3 -5.52384 | opp_overlap 1433012 TTACGTGGATAATCA CCTGC CATT GCATG TTTTTTTCATCCAAA TERM 2320 1433259 - 1433277 + g 82 -8.2 -4.30978 | opp_overlap 1433261 GTCAATTAAGTTTAA CACCGTTA GCA TAATGGTG TTTTCATCCATTACG TERM 2321 1433522 - 1433473 - R 85 -6.7 -5.2112 | gap 1, opp_overlap 1433473 1433491 AATAGCACTAAAAAA GCGGTCTAATTT-TAGCAACTTTT TGC AAAAGTTTTAAGAAATCAGACCGC TTGTTTAACAAATAT APL_1246 1434181 - 1433543 - | hypothetical protein TERM 2322 1434343 - 1434290 - R 100 -12.7 -4.82667 | opp_overlap 1434298, overlap 1434295 1434298 GCACTAGATCAAAAA TACAACAAGCGGTTAAATTCGCTAA AAAA TTTGCAAATTTAACCGCTTGCTCAA CTAAAAGATTGCTCG TERM 2323 1434338 - 1434295 - R 100 -19.2 -4.1193 | opp_overlap 1434298, overlap 1434290 1434298 AGATCAAAAATACAA CAAGCGGTTAAATTCGCTAA AAAA TTTGCAAATTTAACCGCTTG CTCAACTAAAAGATT TERM 2324 1434298 - 1434335 + r 91 -12.9 -3.16564 | opp_overlap 1434298 1434295 1434290 TCAAAAATACAACAA GCGGTTAAATTCGCTAA AAAA TTTGCAAATTTAACCGC TTGCTCAACTAAAAG TERM 2325 1434335 - 1434298 - R 100 -15.1 -4.14576 | opp_overlap 1434298, overlap 1434295 1434290 TCAAAAATACAACAA GCGGTTAAATTCGCTAA AAAA TTTGCAAATTTAACCGC TTGCTCAACTAAAAG APL_1247 1434637 - 1434344 - | hypothetical protein APL_1248 1435296 - 1434637 - | AzlC family protein TERM 2326 1435085 - 1435106 + g 71 -8.7 -3.25539 | opp_overlap 1435082, overlap 1435083 TACAGTGACAACGCT GCCCCCATA ATTA TATGGCGGC TGTTAATTAACATTG TERM 2327 1435299 - 1435286 - G 70 -3.8 -4.84642 | CCTAAAGGAATAAAA CCGA ACATCA TCGG GGATACTTCTTTGAT sapF 1436170 - 1435370 - | peptide transport system ATP-binding protein SapF TERM 2328 1436130 - 1436114 - G 70 -7.9 -3.73953 | overlap 1436103 1436116 ATCATGCTTACGAAA CAGACCG ATC CGGTCGG TAAAATGTTTATTCA TERM 2329 1436128 - 1436116 - G 73 -9.1 -3.45324 | overlap 1436114 CATGCTTACGAAACA GACCG ATC CGGTC GGTAAAATGTTTATT TERM 2330 1436262 - 1436233 - R 86 -12.3 -2.58677 | opp_overlap 1436239, overlap 1436239 TATACAATTATCAAC GAAAAAGACCGCT AACA AGCGGTCTTTTTT ACTAAAGTTTTTACA TERM 2331 1436239 - 1436256 + r 100 -11.3 -5.16237 | opp_overlap 1436239 1436233 ATTATCAACGAAAAA GACCGCT AACA AGCGGTC TTTTTTACTAAAGTT TERM 2332 1436256 - 1436239 - R 100 -11.3 -4.90869 | opp_overlap 1436239, overlap 1436233 ATTATCAACGAAAAA GACCGCT AACA AGCGGTC TTTTTTACTAAAGTT fba 1437362 - 1436286 - | fructose-bisphosphate aldolase TERM 2333 1437421 - 1437387 - R 73 -8.6 -3.18452 | opp_overlap 1437384 1437395, overlap 1437407 CCTTTAAATAAATGA TTCAGTAGGGGCGTAT TAC ATACGCCCTTAATGGA GAGTTTTAGGACGTA TERM 2334 1437395 - 1437413 + r 91 -13.2 -3.16323 | opp_overlap 1437387 1437407, overlap 1437384 TAAATGATTCAGTAG GGGCGTAT TAC ATACGCCC TTAATGGAGAGTTTT pgk 1438638 - 1437463 - | phosphoglycerate kinase TERM 2335 1437713 - 1437728 + g 73 -5.4 -4.64657 | AATACACCGACCGGA CCGTTC CAAA GAATGG TTTTTGCCGATTTGA TERM 2336 1438780 - 1438793 + r 79 -8.1 -4.07885 | opp_overlap 1438779 1438780 TAAACCGCCCCAAAC GCTCC AAAT GGAGC TTTTACCACCACGTC APL_1252 1440184 - 1438796 - | hypothetical protein TERM 2337 1438968 - 1438953 - G 71 -4.6 -4.66938 | ATCGGCAACATAAAA GCGGCA GACG CACCGC AAGCGATAATCGCCG TERM 2338 1439002 - 1438978 - G 100 -12.9 -3.42354 | overlap 1438993 CACCGCAAGCGATAA TCGCCGCCAAT GAA ATCGGCGGCAA GCCAAGTGAATTGGC TERM 2339 1439050 - 1439032 - G 79 -3 -5.30616 | overlap 1439033 CGACGGAAATAAAAA TCGGCATC ATC AACGCCGC ACTAGCCGTATTAGA TERM 2340 1440388 - 1440339 - R 95 -8.9 -5.31519 | gap 1, opp_overlap 1440339 ATAGTGAAAGAAAAA GCGGTTAAATTTCC-GAAAAACCT TGC AAGTTCTTATGAAAATTCAACCGC TTATTTAATCTGTTA APL_1253 1441689 - 1440415 - | putative sodium/sulphate transporter TERM 2341 1441188 - 1441178 - G 82 -3.2 -5.50499 | GCATATTCAAAAAAA CCGA ATT TCAG ACCGGTTTGCGCTAA TERM 2342 1441904 - 1441934 + r 89 -6.3 -5.66338 | gap 1, opp_overlap 1441904 TTACAAACAAAAAAA GGTGCATTTTGTTA GTTC TAACAAAC-GCACC TTTTTTATTCTATTT TERM 2343 1441934 - 1441904 - R 100 -8.5 -6.02919 | gap 1, opp_overlap 1441904 TTACAAACAAAAAAA GGTGCATTTTGTTA GTTC TAACAAA-CGCACC TTTTTTATTCTATTT APL_1254 1443385 - 1441994 - | hypothetical protein TERM 2344 1443504 - 1443468 - R 100 -9.7 -4.90296 | AAAATGTTATAAAAA TGTGAACTTCTTCAAAA AAT TTTTAACGAAATTCACA TAAACACAAGCGGTC TERM 2345 1443567 - 1443509 - R 100 -11.5 -4.11295 | gap 2, opp_overlap 1443510 1443510 1443514, overlap 1443511 1443514 CGAAATTCACATAAA CACAAGCGGTCGATTTTTACTCGCTTTTT ACA AAAAAACTAA-AAAAATCGACCGCTTG-A ATATTCTATCAAATT TERM 2346 1443510 - 1443567 + r 81 -10.9 -2.59565 | gap 1, opp_overlap 1443509 1443511 1443514, overlap 1443510 1443514 GAAATTCACATAAAC ACAAGCGGTCGATTTTTACTCGCTTTTT ACA AAAAAACTAA-AAAAATCGACCGCTTGA ATATTCTATCAAATT TERM 2347 1443566 - 1443511 - R 100 -18.8 -3.64364 | gap 1, opp_overlap 1443510 1443510 1443514, overlap 1443509 1443514 AAATTCACATAAACA CAAGCGGTCGATTTTTACTCGCTTTTT ACA AAAAAACTAA-AAAAATCGACCGCTTG AATATTCTATCAAAT TERM 2348 1443563 - 1443514 - R 100 -14.7 -3.93742 | gap 1, opp_overlap 1443514 1443510 1443510, overlap 1443511 1443509 TTCACATAAACACAA GCGGTCGATTTTTACTCGCTTTTT ACA AAAAAACTAA-AAAAATCGACCGC TTGAATATTCTATCA TERM 2349 1443514 - 1443563 + r 83 -10.3 -3.23183 | gap 1, opp_overlap 1443511 1443509 1443514, overlap 1443510 1443510 TTCACATAAACACAA GCGGTCGATTTTTACTCGCTTTTT ACA AAAAAACTAA-AAAAATCGACCGC TTGAATATTCTATCA parE 1445494 - 1443581 - | DNA topoisomerase IV subunit B TERM 2350 1443931 - 1443916 - G 77 -8.2 -3.93236 | TATCAATCCGATAAA GCGGCG GCAT CGCCAC ATAAACGTGACCGTT TERM 2351 1444206 - 1444184 - G 71 -9.2 -3.06515 | opp_overlap 1444174 1444183 1444182, overlap 1444183 TCGTAGCGGTAAAAT CGCTTGATAA TCC TTATCACGCG CCTGTTTCGCCGAAC TERM 2352 1444995 - 1445014 + g 73 -3.6 -5.00884 | gap 1, opp_overlap 1444999, overlap 1444998 1444999 GGGTTAGGATAGAAA CGAA-CGGT CGT ACCGGTTTG TTTTTTCGGACAGCT TERM 2353 1444998 - 1445010 + g 71 -3.3 -5.04249 | opp_overlap 1444999, overlap 1444995 1444999 TTAGGATAGAAACGA ACGGT CGT ACCGG TTTGTTTTTTCGGAC phoR 1446864 - 1445572 - | phosphate regulon sensor protein PhoR TERM 2354 1446018 - 1445996 - G 75 -3.4 -5.08824 | opp_overlap 1445983 CTCTGATTTAAAAAA TCCGCATT TTTTTGT AAAGCGGA AATCATCGCCGACAT TERM 2355 1446387 - 1446402 + g 75 -3.4 -5.09173 | overlap 1446364 GCGGTCTGTTTTTCT TATTTT GATG AAAATA TTTTTTAAACTCTTC TERM 2356 1446814 - 1446799 - G 100 -9 -5.10208 | TAAGCCGAATAAAAA TGCCGT CGCA ACGGCA AGCATCGCTTCGATA phoB 1447505 - 1446864 - | phosphate regulon transcriptional regulatory protein PhoB TERM 2357 1447660 - 1447611 - R 100 -15.3 -3.28712 | opp_overlap 1447611 1447654, overlap 1447632 1447641 TTTCTGCTCTGATAA GCGGTCGAATTTCACCAAAAATT TGCA AAATTTTAGCAAAATCCGACCGC TTGCGTCGATTCATT TERM 2358 1447650 - 1447632 - R 70 -4.6 -4.74801 | opp_overlap 1447611, overlap 1447611 1447641 GAATTTCACCAAAAA TTTGCAAA ATT TTAGCAAA ATCCGACCGCTTGCG pstB 1448464 - 1447685 - | phosphate import ATP-binding protein PstB pstA 1449324 - 1448473 - | phosphate transport system permease protein PstA pstC 1450277 - 1449324 - | phosphate transport system permease protein PstC TERM 2359 1450061 - 1450045 - G 83 -8.7 -4.15669 | overlap 1450056 AACGCAGAAATCAAA GTACCGA TAA CCGGTAC CAGCACACCGAAATT TERM 2360 1450409 - 1450365 - R 90 -8.3 -5.38839 | gap 2, opp_overlap 1450365 CATATAAAAAGAAAA GCGGTTGAA-TCT-AAAGTTT GCAAA AAACTTTTAAAATTCAACCGC TTACTTATTGTTTAA pstS 1451471 - 1450428 - | phosphate-binding periplasmic protein precursor APL_1262 1451990 - 1451604 - | MerR family transcriptional regulator APL_1263 1452076 - 1452528 + | hypothetical protein APL_1264 1452546 - 1452746 + | putative cation transport ATPase TERM 2361 1452800 - 1452776 - f 88 -7.1 -4.92385 | overlap 1452777 1452778 GATATTCAAAGAAAA TCCCCCTCTTT AGC AAAGAGGGGTG GGGGAGATTTGGCAG TERM 2362 1452799 - 1452777 - f 86 -10.6 -3.54346 | overlap 1452776 1452778 ATATTCAAAGAAAAT CCCCCTCTTT AGC AAAGAGGGGT GGGGGAGATTTGGCA TERM 2363 1452798 - 1452778 - f 93 -14.1 -2.71523 | overlap 1452777 1452776 TATTCAAAGAAAATC CCCCTCTTT AGC AAAGAGGGG TGGGGGAGATTTGGC TERM 2364 1452960 - 1452947 - f 73 -3.8 -5.0432 | AACAAAAATATAAAA CCAC CATTCC GTGG TTAAACTTACCGGAA copA 1452985 - 1455135 + | copper-transporting P-type ATPase TERM 2365 1455210 - 1455171 - T 73 -7.9 -3.80855 | opp_overlap 1455170 1455171 1455172, overlap 1455167 1455172 1455174 TTCTGCAAAAACTAA CCACGGAATACACGGAA ATATTA TTCGGTGTAATCCGTGT ATTCCATGGTTTTAT TERM 2366 1455171 - 1455219 + T 82 -7.6 -4.50583 | gap 1, opp_overlap 1455171 1455167 1455172 1455174, overlap 1455170 1455172 TTCTGCAAAAACTAA CCACGGAATACACGGA-AATATT ATTC GGTGTAATCCGTGTATTCCATGG TTTTATAATGCTATT TERM 2367 1455209 - 1455172 - T 83 -11.4 -2.88031 | opp_overlap 1455172 1455170 1455171, overlap 1455171 1455167 1455174 TCTGCAAAAACTAAC CACGGAATACACGGAA ATATTA TTCGGTGTAATCCGTG TATTCCATGGTTTTA TERM 2368 1455172 - 1455209 + T 87 -11.4 -3.15124 | opp_overlap 1455171 1455167 1455172 1455174, overlap 1455170 1455171 TCTGCAAAAACTAAC CACGGAATACACGGAA ATATTA TTCGGTGTAATCCGTG TATTCCATGGTTTTA APL_1266 1456054 - 1455233 - | putative dehydrogenase APL_1267 1456657 - 1456082 - | hypothetical protein TERM 2369 1456386 - 1456421 + g 82 -3.2 -5.53991 | gap 1, opp_overlap 1456373 1456372, overlap 1456360 1456387 ATGCCGATCACCATC GGCG-CTTGGCCGGAAA GTT TTTCCGCCTTAGCCGCA TTTTTTTCGTCCATA TERM 2370 1457200 - 1457187 - g 77 -3.7 -5.1848 | opp_overlap 1457188, overlap 1457188 1457197 AACGAATTTAAAAAA TCGGG TAAA CCCGT CATTGCCGTCGGCGA sppA 1456773 - 1458629 + | protease 4 TERM 2371 1458687 - 1458629 - f 75 -8.3 -3.84183 | gap 1, opp_overlap 1458637 1458640, overlap 1458640 CGGTACGATAAAATA GCATGTTACAAGCGGTCGGATTTGCAAA TTTT TTCGCAAATCCGACCGCTTATTTTTT-C TTCCCTCACCTCTCT TERM 2372 1458637 - 1458680 + F 100 -19.8 -5.4833 | opp_overlap 1458629 1458640, overlap 1458640 TAAAATAGCATGTTA CAAGCGGTCGGATTTGCAAA TTTT TTCGCAAATCCGACCGCTTA TTTTTTCTTCCCTCA TERM 2373 1458640 - 1458677 + F 100 -21.5 -4.81306 | opp_overlap 1458640 1458629, overlap 1458637 AATAGCATGTTACAA GCGGTCGGATTTGCAAA TTTT TTCGCAAATCCGACCGC TTATTTTTTCTTCCC TERM 2374 1458677 - 1458640 - f 100 -23.7 -3.34787 | opp_overlap 1458637 1458640, overlap 1458629 AATAGCATGTTACAA GCGGTCGGATTTGCAAA TTTT TTCGCAAATCCGACCGC TTATTTTTTCTTCCC APL_1269 1458764 - 1459531 + | putative ribonuclease TERM 2375 1459682 - 1459638 - g 100 -13 -4.65916 | gap 1, opp_overlap 1459647 GTTATTTCAATAAAA CTTTTACACCGCCGACGGTCA GTTA TG-CCGTACGCGGCGTAAAAG CCGGTGTCGCTTATC sprT 1459562 - 1460053 + | hypothetical protein ndh 1460158 - 1461444 + | NADH dehydrogenase TERM 2376 1461493 - 1461454 - T 72 -5.8 -4.34008 | opp_overlap 1461490, overlap 1461490 CACTAAGCAAAACAA GCGGTTATATTTCCGCAA GATT TTGCAAAAAATTAACCAC GGAATACACAGATTA TERM 2377 1461490 - 1461547 + T 100 -15.8 -4.89521 | opp_overlap 1461454 1461490 TTTGCAAAAAATTAA CCACGGAATACACAGATTACTCGGAA ATTTTA TTCGGTGTAATTAGTGTGTTCCGTGG TTTTATTTAAGCTAT TERM 2378 1461547 - 1461490 - T 93 -11.4 -3.93166 | opp_overlap 1461490, overlap 1461454 TTTGCAAAAAATTAA CCACGGAATACACAGATTACTCGGAA ATTTTA TTCGGTGTAATTAGTGTGTTCCGTGG TTTTATTTAAGCTAT APL_1272 1463975 - 1461636 - | transcriptional accessory protein APL_1273 1464598 - 1464050 - | putative fimbrial biogenesis and twitching motility protein PilF-like protein TERM 2379 1464644 - 1464619 - R 71 -9 -3.09273 | TCTCCTCAAGATATA CTCCCCTCAC TTAGTT GCGAAGGGAG AAATTAGTTAATGGT APL_1274 1465833 - 1464652 - | hypothetical protein TERM 2380 1466712 - 1466701 - H 70 -3.6 -5.00616 | CTTTTGTTTAAAAAA GCCA ATCA CGGC AAATCATTTAATAGG TERM 2381 1467179 - 1467191 + G 83 -9.1 -4.11216 | opp_overlap 1467166, overlap 1467163 AACCTACGGATGCGC CGCAC GTT GTGCG TTTTAAAAATCCGCA TERM 2382 1467501 - 1467490 - g 70 -7.2 -3.78018 | CAAAAATTATCGAAA CGCC ACGG GGCG GTAAGCGTAATGCAA gltX 1466737 - 1468176 + | glutamyl-tRNA synthetase TERM 2383 1468196 - 1468220 + F 85 -8.6 -4.10657 | CTATTGACAGTTACA GTGGCTACAT TTATT ATGTCGCCAC TTTTCGGGGATATAG TERM 2384 1468363 - 1468339 - f 74 -9.3 -3.07307 | opp_overlap 1468339 TAAACGTCTACGCAA GCCTTATAGCA CAA CGCTTTAAGGC TTTTTTATTATCTCT TERM 2385 1468339 - 1468363 + F 95 -8.6 -5.62045 | opp_overlap 1468339 TAAACGTCTACGCAA GCCTTATAGC ACAAC GCTTTAAGGC TTTTTTATTATCTCT APL_1276 1468514 - 1468765 + | antitoxin YefM TERM 2386 1469031 - 1469054 + T 93 -8.2 -5.45652 | opp_overlap 1469031 TCAGTAATTTAAAAC GCCTTATTCA GAAA TGGATAGGGC TTTTTTATTACCAAT APL_1277 1469346 - 1469179 - | hypothetical protein lpxK 1470328 - 1469348 - | tetraacyldisaccharide 4'-kinase TERM 2387 1469619 - 1469603 - G 87 -6.5 -5.2422 | AAGCATATTAAAAAA TCGGGGA GGA TGCCCGA TTCCGGCAATAGCCA TERM 2388 1469834 - 1469820 - G 71 -2.1 -5.10933 | overlap 1469821 GCAGGCAAAACAAAA CCGTT ACCAA AACGA CGTATGCCATCAACC TERM 2389 1470409 - 1470387 - R 100 -10.7 -4.85653 | opp_overlap 1470387 TACAGATAAAACAAA TGGACAATG AAGAA CATTGTCCA TTTTAGCGATGCTTA TERM 2390 1470387 - 1470409 + r 100 -10.7 -4.12902 | opp_overlap 1470387 TACAGATAAAACAAA TGGACAATG AAGAA CATTGTCCA TTTTAGCGATGCTTA clpX 1471681 - 1470422 - | ATP-dependent protease ATP-binding subunit clpP 1472271 - 1471681 - | ATP-dependent Clp protease proteolytic subunit APL_1281 1472393 - 1472785 + | hypothetical protein TERM 2391 1472831 - 1472812 - T 100 -12.2 -5.50313 | opp_overlap 1472812 TATAAAACGAAAAAA GCCTCTGA TTTC TCAGAGGC TTTTTCTTGAAAAAG TERM 2392 1472812 - 1472831 + T 100 -12.2 -5.06414 | opp_overlap 1472812 TATAAAACGAAAAAA GCCTCTGA TTTC TCAGAGGC TTTTTCTTGAAAAAG dnaQ 1473917 - 1473144 - | DNA polymerase III subunit epsilon TERM 2393 1473996 - 1473938 - R 79 -8.5 -3.8125 | gap 1, opp_overlap 1473943, overlap 1473943 TGCCTAATCAAAAGA TGCAAGCGGTCGAATTTCAAGGAAAATT TGCA AATTTTCACTAAAATCCGACCGCTTAT- TCACGTATTACTTCG TERM 2394 1473943 - 1473992 + r 89 -10.9 -3.68302 | opp_overlap 1473938 1473943 AATCAAAAGATGCAA GCGGTCGAATTTCAAGGAAAATT TGCA AATTTTCACTAAAATCCGACCGC TTATTCACGTATTAC TERM 2395 1473992 - 1473943 - R 100 -17.5 -3.30459 | opp_overlap 1473943, overlap 1473938 AATCAAAAGATGCAA GCGGTCGAATTTCAAGGAAAATT TGCA AATTTTCACTAAAATCCGACCGC TTATTCACGTATTAC TERM 2396 1474000 - 1474018 + r 72 -6 -4.36903 | CCGACCGCTTATTCA CGTATTAC TTC GCAATACG TTTATATTTGATACG APL_1283 1475674 - 1474004 - | putative ABC transporter ATP-binding protein TERM 2397 1474114 - 1474094 - G 73 -8.3 -3.62644 | opp_overlap 1474094 TTCATAATCAGAGAA GTTACCTTC GTA GAAGGTCAC TTTACCTTCATCGCC TERM 2398 1474094 - 1474114 + g 75 -8.3 -3.78329 | opp_overlap 1474094 TTCATAATCAGAGAA GTTACCTTC GTA GAAGGTCAC TTTACCTTCATCGCC TERM 2399 1475609 - 1475588 - G 77 -4.5 -5.03314 | overlap 1475589 TGCACCCGGAAAAAA GCTTAAAGA AATA TCTTTAAGG ATATGACGCTTCGGC TERM 2400 1475608 - 1475589 - G 70 -8 -3.61506 | overlap 1475588 GCACCCGGAAAAAAG CTTAAAGA AATA TCTTTAAG GATATGACGCTTCGG APL_1284 1475839 - 1476177 + | putative DNA-binding protein APL_1285 1476170 - 1476538 + | hypothetical protein TERM 2401 1476977 - 1477007 + T 100 -15.7 -3.54424 | opp_overlap 1476983, overlap 1476983 ATGTAATTTTGCCTA TAAAAATGACCGC TTGAT GCGGTCATTTTTA TTTAAAACAGTAGGA TERM 2402 1476983 - 1477001 + T 100 -10.3 -5.27335 | opp_overlap 1476983, overlap 1476977 TTTTGCCTATAAAAA TGACCGC TTGAT GCGGTCA TTTTTATTTAAAACA TERM 2403 1477001 - 1476983 - T 100 -10.3 -4.82901 | opp_overlap 1476983 1476977 TTTTGCCTATAAAAA TGACCGC TTGAT GCGGTCA TTTTTATTTAAAACA murA 1478299 - 1477025 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 2404 1477317 - 1477302 - G 74 -6.2 -4.4727 | opp_overlap 1477302 GGAATATGCATAAAA CGATTT TCAA AAATCG TTTCGGTAATACGGC TERM 2405 1478400 - 1478354 - R 83 -8.3 -4.36127 | gap 1, opp_overlap 1478359, overlap 1478356 1478359 CCGAATAACTCAAAA TACAAGCGGTCATTTTTGCAAA TTTT TTTACAAAAGCGACCGCTTA-A TCATTCATTATCTTT TERM 2406 1478399 - 1478356 - R 100 -13.4 -3.77773 | opp_overlap 1478359, overlap 1478354 1478359 GAATAACTCAAAATA CAAGCGGTCATTTTTGCAAA TTTT TTTACAAAAGCGACCGCTTA ATCATTCATTATCTT TERM 2407 1478396 - 1478359 - R 100 -12.9 -3.99228 | opp_overlap 1478359, overlap 1478356 1478354 TAACTCAAAATACAA GCGGTCATTTTTGCAAA TTTT TTTACAAAAGCGACCGC TTAATCATTCATTAT TERM 2408 1478359 - 1478396 + r 86 -10.7 -3.30956 | opp_overlap 1478359 1478356 1478354 TAACTCAAAATACAA GCGGTCATTTTTGCAAA TTTT TTTACAAAAGCGACCGC TTAATCATTCATTAT APL_1287 1478691 - 1478431 - | hypothetical protein APL_1288 1479057 - 1478704 - | hypothetical protein TERM 2409 1478975 - 1478939 - G 100 -14.5 -5.24129 | opp_overlap 1478945, overlap 1478943 TTCGGCGATAAAAAA GAAGCACGCTGCTTCCA AAG CGGAAGCAACGTGTCTC GAGTTAATTCACCGG TERM 2410 1478971 - 1478943 - G 100 -16.1 -3.42236 | opp_overlap 1478945, overlap 1478939 GCGATAAAAAAGAAG CACGCTGCTTCCA AAG CGGAAGCAACGTG TCTCGAGTTAATTCA TERM 2411 1478945 - 1478969 + g 73 -10 -2.92425 | opp_overlap 1478943 1478939 GATAAAAAAGAAGCA CGCTGCTTCC AAAGC GGAAGCAACG TGTCTCGAGTTAATT APL_1289 1479705 - 1479067 - | hypothetical protein APL_1290 1480310 - 1479783 - | hypothetical protein APL_1291 1481033 - 1480329 - | hypothetical protein APL_1292 1481901 - 1481098 - | ABC transporter ATP-binding protein htrA 1482162 - 1483556 + | periplasmic serine protease do/hhoA-like precursor TERM 2412 1483600 - 1483564 - T 100 -12.5 -3.9407 | opp_overlap 1483574, overlap 1483565 1483574 TTCAATAAAAACGAA GCATAAAAAATCCCACC GTT GGTGGGATTTTTTATTT AAGCACTTGCACAAA TERM 2413 1483599 - 1483565 - T 100 -16 -2.95358 | opp_overlap 1483574, overlap 1483564 1483574 TCAATAAAAACGAAG CATAAAAAATCCCACC GTT GGTGGGATTTTTTATT TAAGCACTTGCACAA TERM 2414 1483590 - 1483574 - T 100 -12.3 -5.38249 | opp_overlap 1483574, overlap 1483565 1483564 ACGAAGCATAAAAAA TCCCACC GTT GGTGGGA TTTTTTATTTAAGCA TERM 2415 1483574 - 1483590 + T 100 -12.3 -5.63517 | opp_overlap 1483574 1483565 1483564 ACGAAGCATAAAAAA TCCCACC GTT GGTGGGA TTTTTTATTTAAGCA APL_1294 1484482 - 1483595 - | hypothetical protein TERM 2416 1484128 - 1484112 - G 75 -5.1 -4.83615 | GATTCGGTATAAAAA TTATCCG ATA CGGCTAA ATCACCGTAAAATCC argR 1484943 - 1484482 - | arginine repressor mdh 1485137 - 1486090 + | malate dehydrogenase TERM 2417 1486133 - 1486096 - f 93 -11 -4.02542 | gap 1, opp_overlap 1486098 1486106, overlap 1486106 AAATCCATAATGAAA TATAAATAAAGGGTTGA GTTAT TCAACCCTTT-TTTATA TGCTCAAAGCGGTTG TERM 2418 1486098 - 1486131 + F 76 -9.9 -2.78463 | gap 1, opp_overlap 1486096 1486106, overlap 1486106 ATCCATAATGAAATA TAAATAAAGGGTTGAG TTA TTCAACCCTTT-TTTA TATGCTCAAAGCGGT TERM 2419 1486106 - 1486124 + F 100 -9.6 -5.39721 | opp_overlap 1486096 1486106, overlap 1486098 TGAAATATAAATAAA GGGTTGAG TTA TTCAACCC TTTTTTATATGCTCA TERM 2420 1486124 - 1486106 - f 93 -8.9 -4.73432 | opp_overlap 1486106 1486098, overlap 1486096 TGAAATATAAATAAA GGGTTGA GTTAT TCAACCC TTTTTTATATGCTCA APL_1297 1486180 - 1486449 + | hypothetical protein TERM 2421 1486496 - 1486462 - T 100 -13.1 -5.80248 | opp_overlap 1486465, overlap 1486465 TAAGATATAAAAAAA CAAGCGGTTGATTTT AATAA AAAATCAACCGCTTT TTCATATTTATTTAG TERM 2422 1486465 - 1486493 + T 100 -14.8 -4.97461 | opp_overlap 1486465 1486462 GATATAAAAAAACAA GCGGTTGATTTT AATAA AAAATCAACCGC TTTTTCATATTTATT TERM 2423 1486493 - 1486465 - T 100 -14.8 -4.92669 | opp_overlap 1486465, overlap 1486462 GATATAAAAAAACAA GCGGTTGATTTT AATAA AAAATCAACCGC TTTTTCATATTTATT adk 1487161 - 1486517 - | adenylate kinase TERM 2424 1487237 - 1487203 - R 82 -4.3 -5.57396 | overlap 1487204 1487208 ATAACGAATAAAAAA GCTAAGGCAGTAACC TTACC GATTACTGCCTGAAA TTGCAAATTTTTTAT TERM 2425 1487236 - 1487204 - R 76 -7.8 -3.91997 | overlap 1487203 1487208 TAACGAATAAAAAAG CTAAGGCAGTAACC TTACC GATTACTGCCTGAA ATTGCAAATTTTTTA TERM 2426 1487232 - 1487208 - R 89 -10.8 -3.57867 | overlap 1487204 1487203 GAATAAAAAAGCTAA GGCAGTAACC TTACC GATTACTGCC TGAAATTGCAAATTT TERM 2427 1487259 - 1487291 + r 85 -9.2 -3.95653 | opp_overlap 1487259, overlap 1487251 1487262 ATTTTTTATGAAAAA TAACCGCTTGCAAG AAGCC CTCACAAGCGGTTA TTTATACACTTATTT TERM 2428 1487291 - 1487259 - R 100 -14.3 -4.7254 | opp_overlap 1487259 1487251 1487262 ATTTTTTATGAAAAA TAACCGCTTGCAAGA AGC CCTCACAAGCGGTTA TTTATACACTTATTT TERM 2429 1487262 - 1487288 + r 71 -6.5 -4.08948 | opp_overlap 1487259, overlap 1487259 1487251 TTTTATGAAAAATAA CCGCTTGCAAG AAGCC CTCACAAGCGG TTATTTATACACTTA APL_1299 1489436 - 1487313 - | TonB dependent/ligand-gated channel TERM 2430 1487935 - 1487947 + g 71 -9.1 -3.25282 | opp_overlap 1487927 1487932 TCAGCAACACTACGA GCGGT ACT ACCGC TTAATGCTACTTCGT TERM 2431 1488487 - 1488501 + g 70 -7.2 -3.74224 | TGAGTCGTAATACGG TAACGA GGA TCGTTA TTTGCATCATTTGCA TERM 2432 1489594 - 1489551 - R 100 -15.1 -3.85296 | gap 1, opp_overlap 1489559, overlap 1489559 GTTATAACTAAAACA TATAAAAATGCCCTCTTATA AAAAA TATAAGAGGGCATTTT-ATA AGTAACTAGTTAATT TERM 2433 1489559 - 1489587 + r 100 -14.8 -4.431 | opp_overlap 1489551 1489559 TAAAACATATAAAAA TGCCCTCTTATA AAAAA TATAAGAGGGCA TTTTATAAGTAACTA TERM 2434 1489587 - 1489559 - R 100 -14.8 -5.186 | opp_overlap 1489559, overlap 1489551 TAAAACATATAAAAA TGCCCTCTTATA AAAAA TATAAGAGGGCA TTTTATAAGTAACTA APL_1300 1490893 - 1489613 - | hypothetical protein TERM 2435 1489837 - 1489824 - G 73 -5.9 -4.42386 | TCGCGAGCCATAAAA GCGAC AAAT GCCGC CGTACCTAAGCCGAC TERM 2436 1490085 - 1490063 - G 72 -6.3 -4.27617 | gap 1, opp_overlap 1490055 1490082, overlap 1490064 1490066 GATACTGCACCAAAA CGA-GGTGGT TTTT ACCACCGCCG CGATATGCGACTTGG TERM 2437 1490544 - 1490527 - G 73 -5.6 -4.55016 | overlap 1490539 ATAAAAAAGCTAAAA TTACCG AAAGTA CGGTAA TAATACCGATATCCG TERM 2438 1490587 - 1490576 - G 90 -7.2 -5.15634 | TACCGGATCAAAAAA GCCG AATC CGGC TAAAATTACCAATAA TERM 2439 1490855 - 1490827 - G 82 -8.3 -4.40003 | opp_overlap 1490835, overlap 1490848 CGGTATAAATACAAA GCAACATATTTTT GGT AAAAATTTGTCGC CAAATTGAGGGTTGA TERM 2440 1491012 - 1490989 - R 95 -8.9 -5.36441 | opp_overlap 1490989 TTCGGAGATAAAAAA GGCACAAAC CTAAAC GCTTGTGCC TTCGTTTAATTAATG TERM 2441 1491042 - 1491056 + r 82 -4.3 -5.43866 | GCTTGTTAGCCTTTA TAACC GTTCG GGTTA TTTTTTTGCCAATTC galE 1492048 - 1491032 - | UDP-glucose 4-epimerase ligA 1494163 - 1492112 - | NAD-dependent DNA ligase LigA TERM 2442 1492598 - 1492610 + g 85 -4.1 -5.54079 | TGCAAATAGGAAACG TGCCA AAG TGGTA TTTTTTGCTTTTTCG TERM 2443 1492853 - 1492839 - G 73 -5.6 -4.41114 | overlap 1492840 GCACCACAGAATAAA CCGCCG GTA CAGCGA GCAACCGCTTCGCCT TERM 2444 1492909 - 1492920 + g 90 -2.2 -5.91981 | ATACCGGACAAGCAG TCGG AAAT TCGA TTTTTTTTGCATTTT TERM 2445 1494184 - 1494204 + r 87 -9.7 -3.96892 | opp_overlap 1494185, overlap 1494185 1494187 AATTCTCGATAAAAA AGACCGCTT AAC AAGCGGTCG TTTATGCTAAAAGTT TERM 2446 1494185 - 1494203 + r 88 -13.2 -2.97653 | opp_overlap 1494185, overlap 1494184 1494187 ATTCTCGATAAAAAA GACCGCTT AAC AAGCGGTC GTTTATGCTAAAAGT TERM 2447 1494203 - 1494185 - R 100 -13.2 -5.24531 | opp_overlap 1494184 1494185 1494187 ATTCTCGATAAAAAA GACCGCTT AAC AAGCGGTC GTTTATGCTAAAAGT TERM 2448 1494187 - 1494201 + r 77 -10 -3.04122 | opp_overlap 1494185, overlap 1494185 1494184 TCTCGATAAAAAAGA CCGCTT AAC AAGCGG TCGTTTATGCTAAAA TERM 2449 1494244 - 1494227 - R 77 -8.5 -3.57309 | opp_overlap 1494231 TAAAAGTTTTGCAAA TTAGCTC ACTC GAGCTAA ATAGGCTTGGCGTGA zipA 1495237 - 1494227 - | cell division protein ZipA TERM 2450 1494627 - 1494637 + g 80 -4.6 -5.08601 | GTAAGCATATTATTT TCGG CAA CCGG TTTTTGTTCCGCTAC TERM 2451 1494783 - 1494769 - G 73 -10 -3.02511 | overlap 1494774 CCGACTGTTCCAATA CGGAAG TGG CTTCCG CAATCGGTGACTGAG cysZ 1495357 - 1496238 + | putative sulfate transport protein CysZ TERM 2452 1496280 - 1496270 - T 71 -5.4 -4.56597 | opp_overlap 1496273, overlap 1496271 1496273 CGTTTTTTGCAAAAA TGAG CCT CTCA TGCGAGAGGCTTTTT TERM 2453 1496292 - 1496271 - T 75 -8.7 -3.33744 | opp_overlap 1496273, overlap 1496270 1496273 GTTTTTTGCAAAAAT GAGCCTCTC ATGC GAGAGGCTT TTTAGTTATTTAGTT TERM 2454 1496290 - 1496273 - T 87 -11.3 -3.23708 | opp_overlap 1496273, overlap 1496270 1496271 TTTTTGCAAAAATGA GCCTCTC ATGC GAGAGGC TTTTTAGTTATTTAG TERM 2455 1496273 - 1496290 + T 100 -11.3 -5.04356 | opp_overlap 1496270 1496271 1496273 TTTTTGCAAAAATGA GCCTCTC ATGC GAGAGGC TTTTTAGTTATTTAG TERM 2456 1496679 - 1496656 - T 100 -11.1 -5.44119 | opp_overlap 1496656 TTGAGTTGAAAAAAA GCGGGTAAT AAATTA ATTACCCGC TTTTTAGAAGCTTCT TERM 2457 1496656 - 1496679 + T 100 -11.1 -4.60255 | opp_overlap 1496656 TTGAGTTGAAAAAAA GCGGGTAAT AAATTA ATTACCCGC TTTTTAGAAGCTTCT gnd 1498173 - 1496719 - | 6-phosphogluconate dehydrogenase APL_1306 1498696 - 1498244 - | hypothetical protein TERM 2458 1498547 - 1498524 - G 77 -8.2 -4.06384 | opp_overlap 1498541 CCTGAAGAGTAGAAA CCAATACGCA TATT TTCGTATTGG AATACTGCTATAAAA TERM 2459 1498755 - 1498737 - R 74 -6 -4.59853 | TCAATCTGTTAAAAA TGCGGTAA ATC TTACAGCA CTTCAACTAAAATTC TERM 2460 1498934 - 1498924 - R 74 -6.8 -4.42976 | opp_overlap 1498923 1498924 1498931 1498932 GTACAAAGTAATAAA CCGA TTG TCGG ATTATCATCCGCTCG TERM 2461 1499507 - 1499458 - R 89 -9.3 -4.15508 | gap 1, opp_overlap 1499474, overlap 1499459 AAGCAACGCTGAAAA TGCGACCAACTCAATTTGGCGAAC AGT GTTCGCCATTTTG-GTAAGTCGCT GAATAACAAATAAAA TERM 2462 1499506 - 1499459 - R 87 -12.8 -3.08581 | gap 1, opp_overlap 1499474, overlap 1499458 AGCAACGCTGAAAAT GCGACCAACTCAATTTGGCGAAC AGT GTTCGCCATTTTG-GTAAGTCGC TGAATAACAAATAAA TERM 2463 1499474 - 1499492 + r 100 -13.2 -4.28548 | opp_overlap 1499459 1499458 GCGACCAACTCAATT TGGCGAAC AGT GTTCGCCA TTTTGGTAAGTCGCT TERM 2464 1499818 - 1499867 + r 100 -18.1 -3.86015 | opp_overlap 1499824, overlap 1499824 AAAACATACTTATAC ACGCAAGCGGTCGAATTTGCAGA AAAA TTTGCAAATTCGACCGCTTATGA TTTATAGGAAAAGTG TERM 2465 1499861 - 1499824 - R 100 -20.1 -3.16475 | opp_overlap 1499818 1499824 TACTTATACACGCAA GCGGTCGAATTTGCAGA AAAA TTTGCAAATTCGACCGC TTATGATTTATAGGA TERM 2466 1499824 - 1499861 + r 100 -22.3 -3.64915 | opp_overlap 1499824, overlap 1499818 TACTTATACACGCAA GCGGTCGAATTTGCAGA AAAA TTTGCAAATTCGACCGC TTATGATTTATAGGA APL_1309 1501249 - 1499927 - | putative permease TERM 2467 1501373 - 1501355 - R 73 -7.6 -3.81461 | opp_overlap 1501358 AAATATTAAGCTAAA TTATGAAT TTC ATTCATAA TCTACAAACTATAAT pgl 1502080 - 1501382 - | 6-phosphogluconolactonase TERM 2468 1502137 - 1502109 - R 100 -20.5 -3.72588 | opp_overlap 1502109 TAATTCATACTCAAA TCTCCCCCTCTTT ACT AAAGAGGGGGAGA TTTATTTGCTAAATT TERM 2469 1502109 - 1502137 + r 100 -20.5 -4.5123 | opp_overlap 1502109 TAATTCATACTCAAA TCTCCCCCTCTTT ACT AAAGAGGGGGAGA TTTATTTGCTAAATT zwf 1503639 - 1502152 - | glucose-6-phosphate 1-dehydrogenase TERM 2470 1502337 - 1502315 - G 100 -13.4 -3.65581 | ACGAATTTCCAACAA GCGTGTACCG CAT CGGTACGCGC GAATAAAGTCGCATC TERM 2471 1502389 - 1502378 - G 73 -5.8 -4.46854 | opp_overlap 1502377 GCATCTAATAATAAA CGCT CATA AGCG GTTAATAGGCTGGAA cysQ 1504526 - 1503711 - | CysQ-like protein TERM 2472 1504234 - 1504218 - G 100 -9.5 -4.58424 | opp_overlap 1504215 1504218 GATTACCACAGAAAA TTGATCG GTA CGATCAA TAAATTGTTGCGTCC nudE 1505096 - 1504539 - | ADP-ribose diphosphatase NudE TERM 2473 1505421 - 1505396 - g 73 -8.3 -3.60818 | GCAAAACGGTCGAAA TCGGCGCAACT ATCA AGCTACGCCAA GGTAACGATGAAAAA hslR 1505239 - 1505643 + | heat shock-like protein 15 TERM 2474 1505677 - 1505704 + F 100 -9.8 -5.07652 | overlap 1505680 TATTGAACTCGATTT GACGGCACACAG TTTA CGGTGTGCCTTC TTTTATTTTAACAAG TERM 2475 1505680 - 1505701 + F 100 -10.1 -4.6313 | overlap 1505677 TGAACTCGATTTGAC GGCACACAG TTTA CGGTGTGCC TTCTTTTATTTTAAC TERM 2476 1505838 - 1505824 - g 71 -7 -4.14739 | opp_overlap 1505829 CTATTTATTCCAAAA CCGTGC CGT GCGCGG CGAATGGGTTCGTTT hslO 1505774 - 1506664 + | Hsp33-like chaperonin TERM 2477 1506673 - 1506719 + T 100 -15.4 -4.23045 | opp_overlap 1506674, overlap 1506674 1506677 TTTATAACGCAAAAA ATAAGCGGTTCGATTTTGTATA AAT TTTACTAAATCGAACCGCTTAC TTTATTGAGTCATTA TERM 2478 1506718 - 1506674 - T 100 -18.9 -5.1925 | opp_overlap 1506674 1506673 1506677 TTATAACGCAAAAAA TAAGCGGTTCGATTTTGTATA AAT TTTACTAAATCGAACCGCTTA CTTTATTGAGTCATT TERM 2479 1506674 - 1506718 + T 100 -18.9 -3.13104 | opp_overlap 1506674, overlap 1506673 1506677 TTATAACGCAAAAAA TAAGCGGTTCGATTTTGTATA AAT TTTACTAAATCGAACCGCTTA CTTTATTGAGTCATT TERM 2480 1506677 - 1506715 + T 100 -16.2 -3.69809 | opp_overlap 1506674, overlap 1506674 1506673 TAACGCAAAAAATAA GCGGTTCGATTTTGTATA AAT TTTACTAAATCGAACCGC TTACTTTATTGAGTC dcuB2 1508066 - 1506732 - | anaerobic C4-dicarboxylate transporter TERM 2481 1507679 - 1507661 - G 71 -8.8 -3.35867 | CTAATTGCGAAGCAA CCGATGCC GCT GCCATCGG GCGTTCAGGACGAAT TERM 2482 1508584 - 1508573 - H 71 -3 -5.14698 | AAATGCAAAATAAAA GAAT TATT ATTC ATGCATAAATTTAGA arcB 1508919 - 1509923 + | ornithine carbamoyltransferase arcC 1509945 - 1510892 + | carbamate kinase TERM 2483 1510941 - 1510959 + T 100 -14.6 -5.16237 | opp_overlap 1510924 1510941 TGTAATATCAAGTAA GGGCGTAC CGA GTACGCCC TTTTTTAATACAATT TERM 2484 1510959 - 1510941 - T 100 -14.6 -3.45768 | opp_overlap 1510941, overlap 1510924 TGTAATATCAAGTAA GGGCGTAC CGA GTACGCCC TTTTTTAATACAATT TERM 2485 1511120 - 1511085 - T 76 -7.6 -3.96148 | opp_overlap 1511081 1511086 1511090, overlap 1511086 1511090 CGCTTGTAGCATAAA CGAAAGCCCATAAACC TTAC GCTTTAGGGGCTTTCT CTATTGTTTTATCGC TERM 2486 1511119 - 1511086 - T 83 -11.1 -2.97475 | opp_overlap 1511081 1511086 1511090, overlap 1511085 1511090 GCTTGTAGCATAAAC GAAAGCCCATAAACC TTAC GCTTTAGGGGCTTTC TCTATTGTTTTATCG TERM 2487 1511086 - 1511119 + T 87 -11.1 -3.45078 | opp_overlap 1511086 1511085 1511090, overlap 1511081 1511090 GCTTGTAGCATAAAC GAAAGCCCATAAACC TTAC GCTTTAGGGGCTTTC TCTATTGTTTTATCG TERM 2488 1511090 - 1511115 + T 72 -6.1 -4.31833 | opp_overlap 1511086 1511085 1511090, overlap 1511086 1511081 GTAGCATAAACGAAA GCCCATAAACC TTAC GCTTTAGGGGC TTTCTCTATTGTTTT ptsB 1512561 - 1511140 - | PTS system sucrose-specific EIIBC component TERM 2489 1512099 - 1512117 + g 70 -7.4 -3.90112 | opp_overlap 1512101, overlap 1512101 TGATAAAATCAATCA GATCCGCA AAT TGCGGATA TTTACTTGCAACCGA TERM 2490 1512101 - 1512115 + g 78 -10 -3.54146 | opp_overlap 1512101, overlap 1512099 ATAAAATCAATCAGA TCCGCA AAT TGCGGA TATTTACTTGCAACC TERM 2491 1512115 - 1512101 - G 73 -10 -3.02386 | opp_overlap 1512099 1512101 ATAAAATCAATCAGA TCCGCA AAT TGCGGA TATTTACTTGCAACC TERM 2492 1512611 - 1512656 + r 93 -9.3 -4.47551 | opp_overlap 1512605 1512617, overlap 1512617 ATGATTATATTTTAA CTAAAACGTTTTAGCTAAA ACAGAGAA TTCTGCTAAAACGTTTTAG TTTTGTCGATTAGAT thiQ 1513396 - 1512752 - | thiamine transport ATP-binding protein ThiQ thiP 1515018 - 1513393 - | thiamine transporter membrane protein ptsH 1515255 - 1515512 + | PTS system phosphocarrier protein HPr TERM 2493 1515590 - 1515542 - f 82 -9.8 -3.56092 | gap 1, opp_overlap 1515543 1515546, overlap 1515543 1515545 TTATTATGTTGTAAA GCAGCCCTATTGCCATTCCTATT AAAA AATAGGGATGG-AATAGGGTTGT ATTGTGCTATATGAG TERM 2494 1515543 - 1515589 + F 100 -17.7 -3.32109 | gap 1, opp_overlap 1515542 1515543 1515545, overlap 1515546 TATTATGTTGTAAAG CAGCCCTATTGCCATTCCTATT AAAA AATAGGGATGG-AATAGGGTTG TATTGTGCTATATGA TERM 2495 1515589 - 1515543 - f 87 -13.3 -2.73441 | gap 1, opp_overlap 1515543 1515546, overlap 1515542 1515545 TATTATGTTGTAAAG CAGCCCTATTGCCATTCCTATT AAAA AATAGGGATGG-AATAGGGTTG TATTGTGCTATATGA TERM 2496 1515587 - 1515545 - f 76 -10.1 -2.91144 | gap 1, opp_overlap 1515543 1515546, overlap 1515543 1515542 TTATGTTGTAAAGCA GCCCTATTGCCATTCCTATT AAAA AATAGGGATGG-AATAGGGT TGTATTGTGCTATAT TERM 2497 1515546 - 1515586 + F 100 -15.8 -3.78879 | gap 1, opp_overlap 1515545 1515543 1515542, overlap 1515543 TATGTTGTAAAGCAG CCCTATTGCCATTCCTATT AAAA AATAGGGATGG-AATAGGG TTGTATTGTGCTATA TERM 2498 1516503 - 1516532 + G 71 -6.6 -4.09519 | gap 2, overlap 1516505 1516506 TTACGTAACGGCGGC GAAT-CGGT-CGGT TTAT ACCGTACCGAATTC TTATTTATGGATCGT ptsI 1515636 - 1517357 + | phosphoenolpyruvate-protein phosphotransferase TERM 2499 1517378 - 1517418 + F 71 -7.7 -3.65046 | opp_overlap 1517380, overlap 1517380 1517387 1517389 AATAAATGGCATACA AAGACAAGATTCTCGTATA GAA TGTACGGGTATTTTGTCTA TTATTAAAATAACGG TERM 2500 1517380 - 1517416 + F 85 -10.3 -3.40611 | opp_overlap 1517380, overlap 1517378 1517387 1517389 TAAATGGCATACAAA GACAAGATTCTCGTATA GAA TGTACGGGTATTTTGTC TATTATTAAAATAAC crr 1517442 - 1517942 + | glucose-specific PTS system component TERM 2501 1517991 - 1517965 - f 72 -8 -3.38374 | opp_overlap 1517967, overlap 1517963 1517967 CAACAAAGAAAAGCA TATGCCACGGTA CTA TATCGTGGCATT TTTGTTTGCTAATTT TERM 2502 1517967 - 1517989 + F 100 -12.8 -5.34309 | opp_overlap 1517965 1517963 1517967 ACAAAGAAAAGCATA TGCCACGGTA CTA TATCGTGGCA TTTTTGTTTGCTAAT TERM 2503 1517989 - 1517967 - f 83 -10.6 -3.22818 | opp_overlap 1517967, overlap 1517965 1517963 ACAAAGAAAAGCATA TGCCACGGTA CTA TATCGTGGCA TTTTTGTTTGCTAAT TERM 2504 1518059 - 1518082 + F 100 -11.8 -5.29885 | ATAAACCGAATTTGT GCGTAAAGGG ATTC CTCTTTACGC TTTTATTTTTAACTT TERM 2505 1518184 - 1518164 - g 73 -9.1 -3.53012 | opp_overlap 1518156 CTTGGGGCTGCCAAA TGAATGAGT ACG ACTCATCCA AAATGGCGGATCTTT TERM 2506 1518357 - 1518337 - g 73 -2.5 -5.16472 | AAAAATTGGAAAAAA GATAAACCG GAT CTGATTATC GGTGTCGGCGGTTGC APL_1325 1518127 - 1519554 + | hypothetical protein TERM 2507 1519595 - 1519562 - f 87 -9.8 -3.9749 | opp_overlap 1519563, overlap 1519563 1519566 ATCTATAATAGTAAA TTAAGCAGATCTTA TTAAAC TAAGATCTGCTTAT TTTTTATCCTGGCTT TERM 2508 1519594 - 1519563 - f 88 -13.3 -2.97771 | opp_overlap 1519563, overlap 1519562 1519566 TCTATAATAGTAAAT TAAGCAGATCTTA TTAAAC TAAGATCTGCTTA TTTTTTATCCTGGCT TERM 2509 1519563 - 1519594 + F 100 -13.3 -5.31877 | opp_overlap 1519563 1519562 1519566 TCTATAATAGTAAAT TAAGCAGATCTTA TTAAAC TAAGATCTGCTTA TTTTTTATCCTGGCT TERM 2510 1519591 - 1519566 - f 86 -10.6 -3.62191 | opp_overlap 1519563, overlap 1519563 1519562 ATAATAGTAAATTAA GCAGATCTTA TTAAAC TAAGATCTGC TTATTTTTTATCCTG TERM 2511 1519842 - 1519822 - g 80 -9.7 -3.60151 | opp_overlap 1519840 CGGTTTAAATGATAA GCAGCGAGA GGC TGTCGCTGC GCCGTTGGGCAATTA TERM 2512 1520502 - 1520520 + G 70 -9.6 -2.87963 | ACTTAATCCGTCTGC TTGCCGGT GAA ACCGGTAA TGTGATGATTGTCGG uvrD 1519784 - 1521982 + | DNA-dependent helicase II TERM 2513 1522008 - 1522032 + F 100 -10.2 -5.88197 | ATAGGGTGAATATCG GCATATATGA TTTAT TCATATATGC TTTTTTTCTATTTAA TERM 2514 1522901 - 1522882 - g 71 -5 -4.59773 | TTCGATTTGGAAAAA TGTATTGC CTAT GCAAAACA AGTGAATCCGAATAT hypB 1522186 - 1522995 + | hydrogenase nickel incorporation protein HypB hypD 1523007 - 1524122 + | hydrogenase isoenzymes formation protein HypD TERM 2515 1524979 - 1524965 - g 86 -11.4 -3.40403 | opp_overlap 1524961 TCGTCGTTATTACAA GTGCCG AGA CGGCAC AAGCTGCGTTATCCG hypE 1524124 - 1525137 + | hydrogenase isoenzymes formation protein HypE TERM 2516 1525183 - 1525210 + T 89 -11.4 -3.40163 | opp_overlap 1525185 1525188 TATAACACTGTAATT TATAAGGGCGAA TTTA TTCGCCCTTACA TTAATATTAATCATA TERM 2517 1525208 - 1525185 - T 93 -14 -2.55 | opp_overlap 1525183, overlap 1525188 TAACACTGTAATTTA TAAGGGCGAA TTTA TTCGCCCTTA CATTAATATTAATCA TERM 2518 1525205 - 1525188 - T 89 -11.3 -3.42354 | opp_overlap 1525183, overlap 1525185 CACTGTAATTTATAA GGGCGAA TTTA TTCGCCC TTACATTAATATTAA hypF 1527502 - 1525217 - | carbamoyltransferase HypF TERM 2519 1528137 - 1528148 + G 73 -7.2 -4.10657 | TATATTGTATGATTG CGGG TAAA CCCG TTTTAGAACATATCA TERM 2520 1528336 - 1528348 + G 71 -9.1 -3.28304 | overlap 1528334 1528332 TCCTCATAATTTCTT GGCGA CCG TCGCC TATATTATTACCTAT TERM 2521 1528493 - 1528509 + G 80 -8.7 -3.95219 | opp_overlap 1528493 1528495, overlap 1528505 TACGGCGATGAAGGA CACCGAC AAG GTTGGTG TTTATACCATTTAGG hyaA 1527737 - 1528879 + | hydrogenase 2 small subunit TERM 2522 1528972 - 1528989 + G 76 -9.9 -3.25906 | overlap 1528970 1528953 AAAATCGTCCTCGGA TACCGAC TGCC GTCGGTA TGTTGTACGATTCTA TERM 2523 1529215 - 1529202 - g 75 -3.1 -5.21709 | GCTTACATTAAAAAA CAATG TATG CACTG TGTTGAACCCAATTG hybA 1528872 - 1529909 + | hydrogenase 2 protein HybA hybB 1529902 - 1531083 + | putative hydrogenase 2 b cytochrome subunit TERM 2524 1532288 - 1532274 - g 79 -8.6 -4.2237 | AAATTAACCGTAAAA CACTTC AAT GAAGTG AAAAACTTATATAAA TERM 2525 1532478 - 1532466 - g 83 -9.1 -4.18494 | opp_overlap 1532474, overlap 1532473 1532474 GATGCTTACTTAAAA GCGGA AAT TCCGC CGACAGGCGAATTTA hyaB 1531080 - 1532789 + | hydrogenase 2 large subunit TERM 2526 1532888 - 1532876 - g 75 -3.3 -5.10208 | GAACTGGAACAAAAA CCGGA ACT TACGG CGTTCTTAGATATTG hyaD 1532789 - 1533286 + | hydrogenase 2 maturation endopeptidase hybE 1533279 - 1533782 + | hydrogenase 2-specific chaperone hybG 1533810 - 1534088 + | hydrogenase 2 accessory protein HypG TERM 2527 1534155 - 1534118 - T 91 -5.7 -5.90231 | gap 1, opp_overlap 1534118, overlap 1534130 ATAAATAGAAAAAAA GCCGAATAA-AAAGTGTT TAT AACACAACGTTATTCGGC TTTCTTATACCAATC TERM 2528 1534142 - 1534130 - T 84 -6.3 -5.11112 | opp_overlap 1534118, overlap 1534118 AAAGCCGAATAAAAA GTGTT TAT AACAC AACGTTATTCGGCTT hybF 1534524 - 1534183 - | putative hydrogenase nickel incorporation protein HybF TERM 2529 1534687 - 1534703 + r 81 -10.9 -2.62616 | opp_overlap 1534666 TCGAACTCGCGACCC CGACCTT GGC AAGGTCG TGCTCTACCAACTGA TERM 2530 1534838 - 1534816 - R 78 -10.6 -2.72511 | opp_overlap 1534807 1534820, overlap 1534815 GGCACGCCCCGAAAG GCGAGGGATT TTA AATCCCTTGC GTCTACCGATTCCGC TERM 2531 1534820 - 1534834 + r 71 -8.6 -3.12847 | opp_overlap 1534816 1534815, overlap 1534807 CGCCCCGAAAGGCGA GGGATT TTA AATCCC TTGCGTCTACCGATT TERM 2532 1534957 - 1534935 - R 78 -10.6 -2.72511 | opp_overlap 1534926 1534939, overlap 1534934 GGCACGCCCCGAAAG GCGAGGGATT TTA AATCCCTTGC GTCTACCGATTCCGC TERM 2533 1534939 - 1534953 + r 71 -8.6 -3.12847 | opp_overlap 1534935 1534934, overlap 1534926 CGCCCCGAAAGGCGA GGGATT TTA AATCCC TTGCGTCTACCGATT TERM 2534 1535037 - 1535053 + r 81 -10.9 -2.62616 | opp_overlap 1535016 TCGAACTCGCGACCC CGACCTT GGC AAGGTCG TGCTCTACCAACTGA TERM 2535 1535168 - 1535146 - R 78 -10.6 -2.72511 | opp_overlap 1535137 1535150, overlap 1535145 GGCACGCCCCGAAAG GCGAGGGATT TTA AATCCCTTGC GTCTACCGATTCCGC TERM 2536 1535150 - 1535164 + r 71 -8.6 -3.12847 | opp_overlap 1535146 1535145, overlap 1535137 CGCCCCGAAAGGCGA GGGATT TTA AATCCC TTGCGTCTACCGATT TERM 2537 1535237 - 1535253 + r 81 -10.9 -2.62616 | opp_overlap 1535216 TCGAACTCGCGACCC CGACCTT GGC AAGGTCG TGCTCTACCAACTGA TERM 2538 1535307 - 1535288 - R 100 -9.3 -5.06414 | opp_overlap 1535287 1535288 TTCCCGCAATAAAAA CGCTACG TTATTT CGTAGCG ATTTATGTGCCGTAT TERM 2539 1535288 - 1535307 + r 74 -9.3 -3.02966 | opp_overlap 1535288, overlap 1535287 TTCCCGCAATAAAAA CGCTACG TTATTT CGTAGCG ATTTATGTGCCGTAT mfd 1538896 - 1535447 - | transcription-repair coupling factor TERM 2540 1536673 - 1536685 + g 75 -9.1 -3.73914 | TCTCTTTTTGACGCA CACCG AAG CGGTG TTCTTCATCAATAAT TERM 2541 1538000 - 1538014 + g 77 -6.4 -4.58395 | TTGTTCAGTATCCTT GTGGAA CTG TTCCGC TTTTTCCGCAATACC TERM 2542 1538372 - 1538340 - G 91 -6.2 -5.55664 | overlap 1538345 TCATCATCAAAAAAA TCCAAGCGGAACGG GCTTT CCGCTCCCATCGGA TAGAGGTCAAGTAAT TERM 2543 1541468 - 1541491 + G 76 -7.6 -4.11281 | CACAAGTCGCATCAC GTTTAATCGA GCCG TTGATTAAAC TTTCTCGTTATGATA pepN 1538998 - 1541607 + | aminopeptidase N TERM 2544 1541653 - 1541632 - T 100 -11.7 -5.4492 | opp_overlap 1541632 GAGACAGATAAAAAA GCCTAATTC GTAA GAATTAGGC TTTTTACCATATTGC TERM 2545 1541632 - 1541653 + T 100 -11.7 -4.66953 | opp_overlap 1541632 GAGACAGATAAAAAA GCCTAATTC GTAA GAATTAGGC TTTTTACCATATTGC TERM 2546 1541729 - 1541674 - T 89 -10.8 -3.56821 | gap 1, opp_overlap 1541677, overlap 1541677 1541723 ACCATATTGCTTAAA CAAGCGGTTGGATTAAATG-GAATTTT TGT AAACTTCTCATTAAATTCAACCGCTTA TTCAATCGGAATCTT TERM 2547 1541677 - 1541726 + T 95 -12.5 -3.67775 | gap 1, opp_overlap 1541677 1541674 1541723 ATATTGCTTAAACAA GCGGTTGGATTAAATG-GAATTTT TGT AAACTTCTCATTAAATTCAACCGC TTATTCAATCGGAAT TERM 2548 1541726 - 1541677 - T 93 -10.3 -3.91984 | gap 1, opp_overlap 1541677, overlap 1541674 1541723 ATATTGCTTAAACAA GCGGTTGGATTAAATG-GAATTTT TGT AAACTTCTCATTAAATTCAACCGC TTATTCAATCGGAAT APL_1341 1542335 - 1541745 - | putative glycerol-3-phosphate acyltransferase PlsY folB 1542407 - 1542760 + | dihydroneopterin aldolase TERM 2549 1543115 - 1543135 + G 75 -5.3 -4.86731 | TATGTGGGAGCGGTT GCAATCGGG GAA TCCGGTCGC TTTTATTTCGGGGCG cdd 1542869 - 1543762 + | cytidine deaminase TERM 2550 1543800 - 1543772 - T 86 -8.4 -4.6902 | gap 1, opp_overlap 1543773 1543780, overlap 1543773 1543780 GTATAATCGCAAAAA TGAAAAAAGCACC TTAG GGTGCTTTTTT-A TATATTGATTAGTAT TERM 2551 1543773 - 1543800 + T 79 -10 -3.20226 | opp_overlap 1543772 1543773 1543780, overlap 1543780 TATAATCGCAAAAAT GAAAAAAGCACC TTAG GGTGCTTTTTTA TATATTGATTAGTAT TERM 2552 1543800 - 1543773 - T 81 -10 -3.40689 | opp_overlap 1543773 1543780, overlap 1543772 1543780 TATAATCGCAAAAAT GAAAAAAGCACC TTAG GGTGCTTTTTTA TATATTGATTAGTAT TERM 2553 1543780 - 1543793 + T 93 -8.1 -5.47431 | opp_overlap 1543780 1543772 1543773, overlap 1543773 GCAAAAATGAAAAAA GCACC TTAG GGTGC TTTTTTATATATTGA TERM 2554 1543793 - 1543780 - T 93 -8.1 -5.54079 | opp_overlap 1543773 1543780, overlap 1543772 1543773 GCAAAAATGAAAAAA GCACC TTAG GGTGC TTTTTTATATATTGA ftsX 1544747 - 1543809 - | cell division protein FtsX fstE 1545410 - 1544757 - | cell division ATP-binding protein FtsE ftsY 1547234 - 1545501 - | cell division protein FtsY-like protein TERM 2555 1545757 - 1545776 + g 71 -2.1 -5.14563 | overlap 1545756 1545759 GTGAGCATAATTTCG TGCGGTG CGCTTT CATCGTA TTTTTTCGTCACGCG APL_1347 1547312 - 1547905 + | putative methylase APL_1348 1547971 - 1548282 + | dsDNA-mimic protein hpaC 1548298 - 1548810 + | 4-hydroxyphenylacetic acid hydroxylase putative coupling protein TERM 2556 1548852 - 1548836 - f 87 -10.9 -3.48924 | opp_overlap 1548836 GTATTTTTGATATAA CCGACTA TTT TAGTCGG TTTTTTATTGCCTAG TERM 2557 1548836 - 1548852 + F 100 -10.9 -5.4833 | opp_overlap 1548836 GTATTTTTGATATAA CCGACTA TTT TAGTCGG TTTTTTATTGCCTAG TERM 2558 1549770 - 1549760 - g 74 -6.8 -4.28361 | opp_overlap 1549750 GCAACCGTATTAAAA TGCG TTT CGCA ACCATGTTAGCCAAG tehB 1548925 - 1549797 + | tellurite resistance protein TehB TERM 2559 1549875 - 1549820 - T 100 -16.4 -3.65046 | opp_overlap 1549820 1549823, overlap 1549823 TTTTTATCCTAACAA CAAGCGGTCTGATTTATCGGGAAATT TGCA AATTTCTCTCAAAATCAGACCGCTTG TTCGTATATAAAAAA TERM 2560 1549820 - 1549875 + T 100 -18.6 -3.32022 | opp_overlap 1549820 1549823, overlap 1549823 TTTTTATCCTAACAA CAAGCGGTCTGATTTATCGGGAAATT TGCA AATTTCTCTCAAAATCAGACCGCTTG TTCGTATATAAAAAA TERM 2561 1549823 - 1549872 + T 100 -14.5 -3.80018 | opp_overlap 1549820 1549823, overlap 1549820 TTATCCTAACAACAA GCGGTCTGATTTATCGGGAAATT TGCA AATTTCTCTCAAAATCAGACCGC TTGTTCGTATATAAA TERM 2562 1549872 - 1549823 - T 100 -12.3 -3.96068 | opp_overlap 1549823 1549820, overlap 1549820 TTATCCTAACAACAA GCGGTCTGATTTATCGGGAAATT TGCA AATTTCTCTCAAAATCAGACCGC TTGTTCGTATATAAA TERM 2563 1549913 - 1549891 - T 100 -16.4 -5.36441 | opp_overlap 1549882 TTCGTATATAAAAAA GGTACTCGTC AGA GACGAGTACC ATCGCTAAAATTTAC artM 1550608 - 1549925 - | arginine transporter permease subunit ArtM TERM 2564 1550364 - 1550354 - G 75 -5.4 -4.85599 | CGCATCGGATAAAAA TTGC CAA GCAA AGCTATCGACAATCC artQ 1551279 - 1550608 - | arginine transporter permease subunit ArtQ TERM 2565 1551248 - 1551219 - G 73 -10.2 -2.55544 | gap 1, overlap 1551215 CTATCAGGGAAGTCA GTGCCAACCCTAA GGTCA TTAGGGTTG-CAC TATAAATAAGCGGAA artI 1552004 - 1551285 - | arginine-binding periplasmic protein precursor artP 1552758 - 1552024 - | arginine transporter ATP-binding subunit TERM 2566 1552864 - 1552896 + r 100 -9.2 -4.84017 | opp_overlap 1552864 AATTTTTATAAAGAA CGACCGCTTGTCAT TCAAT ATAACAAGCAGTCG TTTTTCTCCGAAGTT TERM 2567 1552896 - 1552864 - R 100 -13.6 -4.07535 | opp_overlap 1552864 AATTTTTATAAAGAA CGACCGCTTGTCAT TCAAT ATAACAAGCAGTCG TTTTTCTCCGAAGTT APL_1355 1553480 - 1552983 - | hypothetical protein TERM 2568 1553150 - 1553128 - G 71 -9.1 -3.32268 | opp_overlap 1553120 1553128 1553130 TAACGATGTTTACAA TTCGGCGGT GCCAT ACCGCCGTA ATTTGAAGCTTCTTC TERM 2569 1553128 - 1553151 + g 73 -8.2 -3.64049 | gap 1, opp_overlap 1553128, overlap 1553120 1553130 TAACGATGTTTACAA TT-CGGCGGTG CCA TACCGCCGTAA TTTGAAGCTTCTTCG TERM 2570 1553130 - 1553148 + g 93 -12.4 -2.92935 | opp_overlap 1553128, overlap 1553128 1553120 ACGATGTTTACAATT CGGCGGTG CCA TACCGCCG TAATTTGAAGCTTCT APL_1356 1553553 - 1554515 + | putative sodium/calcium exchange protein TERM 2571 1554591 - 1554534 - T 100 -15.9 -4.87892 | gap 1, opp_overlap 1554535 1554538, overlap 1554535 GCCGAATAAAATAAA TCAAGCGGTCGTTTTTCTTGGAGACTTT GCA AAAATCTTCG-GAAAAACGACCGCTTGT TTTAACGTACCGTTT TERM 2572 1554535 - 1554590 + T 100 -21.6 -4.14511 | gap 1, opp_overlap 1554535 1554534, overlap 1554538 CCGAATAAAATAAAT CAAGCGGTCGTTTTTCTTGGAGACTTT GCA AAAATCTTCG-GAAAAACGACCGCTTG TTTTAACGTACCGTT TERM 2573 1554590 - 1554535 - T 100 -19.4 -3.5165 | gap 1, opp_overlap 1554535 1554538, overlap 1554534 CCGAATAAAATAAAT CAAGCGGTCGTTTTTCTTGGAGACTTT GCA AAAATCTTCG-GAAAAACGACCGCTTG TTTTAACGTACCGTT TERM 2574 1554538 - 1554587 + T 100 -17.5 -4.19746 | gap 1, opp_overlap 1554535 1554534, overlap 1554535 AATAAAATAAATCAA GCGGTCGTTTTTCTTGGAGACTTT GCA AAAATCTTCG-GAAAAACGACCGC TTGTTTTAACGTACC APL_1357 1554886 - 1554593 - | putative HTH-type transcriptional regulator TERM 2575 1554682 - 1554667 - G 77 -10.4 -3.11178 | CAAGCAACTTTAATA CCGTCG CCAA CGACGG ATTAACCGAGCCTTT APL_1358 1555238 - 1554867 - | hypothetical protein TERM 2576 1555380 - 1555366 - H 75 -10 -2.76696 | opp_overlap 1555365 1555358, overlap 1555365 1555368 TTTTGTTGTAAGAAG CAGGCA TTT TGCCTG ACCTTACTTATTTAT TERM 2577 1556404 - 1556420 + G 76 -10.8 -2.62255 | overlap 1556403 1556415 TCGCCTTGTACTTCG GCGCCG TTATC CGGCGC ATTGCTGTATGTTGC dipZ 1555432 - 1557183 + | thiol:disulfide interchange protein precursor TERM 2578 1557189 - 1557213 + F 87 -6.4 -5.5112 | overlap 1557190 TCAGTTATAATCTCA CGGCACAAGT TGATC GCTTGTGCCA TTTTTTATTAATCAC TERM 2579 1557190 - 1557212 + F 83 -9.9 -3.89587 | overlap 1557189 CAGTTATAATCTCAC GGCACAAGT TGATC GCTTGTGCC ATTTTTTATTAATCA APL_1360 1557241 - 1557810 + | hypothetical protein TERM 2580 1557813 - 1557851 + T 100 -12 -4.48987 | opp_overlap 1557815 1557818, overlap 1557815 1557818 GGCGAGAATCTAACA AATAAGCGGTTAAATTTT TAG GAAATTTAACCGCTTGTA TTTTAGTTATCGGAA TERM 2581 1557849 - 1557815 - T 100 -11.7 -4.27467 | opp_overlap 1557813 1557815 1557818, overlap 1557818 CGAGAATCTAACAAA TAAGCGGTTAAATTT TTAGG AAATTTAACCGCTTG TATTTTAGTTATCGG TERM 2582 1557815 - 1557849 + T 100 -14.6 -3.85296 | opp_overlap 1557815 1557818, overlap 1557813 1557818 CGAGAATCTAACAAA TAAGCGGTTAAATTTT TAG GAAATTTAACCGCTTG TATTTTAGTTATCGG TERM 2583 1557846 - 1557818 - T 100 -13.4 -4.2416 | opp_overlap 1557818 1557815 1557813, overlap 1557815 GAATCTAACAAATAA GCGGTTAAATTT TTAGG AAATTTAACCGC TTGTATTTTAGTTAT TERM 2584 1557818 - 1557846 + T 100 -14.1 -4.03665 | opp_overlap 1557815 1557818, overlap 1557815 1557813 GAATCTAACAAATAA GCGGTTAAATTTT TAG GAAATTTAACCGC TTGTATTTTAGTTAT APL_1361 1558708 - 1557854 - | hypothetical protein TERM 2585 1558556 - 1558541 - G 75 -3.2 -5.15969 | GTGTAAGGCAAAAAA CGGTTT TTTG ATACCG TAATGGCTAAGTAAT TERM 2586 1558851 - 1558866 + GH 89 -6.2 -5.40072 | CGCTTTTTCTTTCTG CTTGTA CCGG TACAAG TTTTTTTGAAAACCC APL_1362 1558781 - 1560529 + | hypothetical protein TERM 2587 1560533 - 1560547 + GF 82 -8.6 -4.07568 | opp_overlap 1560521 1560532 AACGCTAACTAAACG TTCGCA AGG TGCGAA TTTTGAACAAAAAGC TERM 2588 1560759 - 1560744 - gf 81 -5.4 -5.1963 | gap 1, opp_overlap 1560754 1560756 CGGAAGCAACAAAAA TGGCTGG ATG CC-GCCA ATATGTGGCTGTTTA APL_1363 1560504 - 1560875 + | hypothetical protein TERM 2589 1560850 - 1560862 + F 84 -6.3 -5.07053 | opp_overlap 1560840, overlap 1560856 GAAATGATCCGCCTC TTTGG ATC CCAAA TTTTTTAGGATAGTT gmhA 1560884 - 1561462 + | putative phosphoheptose isomerase TERM 2590 1561987 - 1561954 - g 71 -6.9 -4.21462 | gap 1, opp_overlap 1561942 1561940, overlap 1561944 AGTCATTACCGAAAA CGGTGA-AGTCTTC TTAATCG GAAAACTCTCACCG GCACAAGCGGATGCC TERM 2591 1562062 - 1562042 - g 73 -5.6 -4.41348 | CGCGGGGTAAATAAA GTAATTAA AGTGA TTAATTAC GTACAATAACCGATA hly 1561484 - 1562071 + | hypothetical protein TERM 2592 1562104 - 1562085 - T 80 -6.4 -4.82154 | opp_overlap 1562086, overlap 1562086 1562102 AACCGATATGAAAAA CCGCCTTT AACA AAAGGCGT TTTTTTTACAAAAAA TERM 2593 1562103 - 1562086 - T 81 -9.9 -3.48208 | opp_overlap 1562086, overlap 1562085 1562102 ACCGATATGAAAAAC CGCCTTT AACA AAAGGCG TTTTTTTTACAAAAA TERM 2594 1562086 - 1562103 + T 100 -9.9 -5.75342 | opp_overlap 1562086 1562085 1562102 ACCGATATGAAAAAC CGCCTTT AACA AAAGGCG TTTTTTTTACAAAAA TERM 2595 1562132 - 1562120 - T 72 -2.7 -5.24129 | overlap 1562102 TTTTTTTACAAAAAA CAAAT GAA ATTCG ACCGCTTACTATTCC APL_1366 1563650 - 1562283 - | hypothetical protein TERM 2596 1563314 - 1563326 + g 89 -6.9 -5.36441 | opp_overlap 1563314 CCGACAGTTTATAAG GGCGG TTA CTGCC TTTTTTATATACGAC TERM 2597 1564505 - 1564455 - R 74 -3.5 -5.25735 | gap 1, opp_overlap 1564473 TTAAAAAAGTAAAAA GCAGTCATTTTCGGA-TCACTATT TTGC AATAGTTTCTCTAAAAATGACCGC TTGTCTATTAAAGCA ccmF 1566470 - 1564521 - | cytochrome c-type biogenesis protein CcmF ccmE 1567015 - 1566470 - | cytochrome c-type biogenesis protein CcmE TERM 2598 1566565 - 1566577 + g 79 -7.7 -4.40882 | CTTCGGAAATACCTG CAGCA CCA TGCTG TTCTTTTAATTTATC TERM 2599 1567050 - 1567034 - R 85 -8.7 -4.10429 | AATCACCTTCTAAAA GTATGCC GAC GGCACAC AATATTAAATAATCG ccmD 1567396 - 1567199 - | heme exporter protein D ccmC 1568140 - 1567409 - | heme exporter protein C TERM 2600 1568173 - 1568163 - R 79 -4 -5.42265 | CCAAATTACAAAAAA GATT AAA AATC TCACCGCTTTTCATT ccmB 1568853 - 1568191 - | heme exporter protein B ccmA 1569485 - 1568850 - | cytochrome c biogenesis protein CcmA APL_1373 1570336 - 1569626 - | DNA replication initiation factor TERM 2601 1570539 - 1570514 - H 100 -10.5 -5.10154 | opp_overlap 1570514 AGCCAAAAGCAAAAA CCCCGTAGTTA TCGC TAACCACAGGG TTCCCTTCGCCTCTC TERM 2602 1570747 - 1570773 + H 74 -2.2 -5.57729 | TTTTCTTCTTAAATT CGAAACAAGCCG TCA CTGATTTTTTCG TTTTTTGTCTTCTTT TERM 2603 1572451 - 1572465 + H 71 -5.7 -4.58213 | TGGTCTTCCGGCGAA CGAGT TTTTC ACTCG TTTTATCGTTACTTA TERM 2604 1573246 - 1573258 + H 72 -6.2 -4.31549 | AGGTTCTATTTCACT CCCC TCACC GGGG TTCTTTTCGCTTTTC TERM 2605 1574224 - 1574236 + H 82 -7.7 -4.52347 | GACCCAAAAGGATGC CGGAT TAT ATCCG TTTTCGTCTTCTTTC TERM 2606 1574329 - 1574312 - H 74 -9.1 -3.07291 | opp_overlap 1574312 AAGGAGGTGATCCAA CCGCAGG TTCC CCTACGG TTACCTTGTTACGAC TERM 2607 1576077 - 1576032 - H 80 -2.6 -5.72254 | gap 1, overlap 1576035 TTAAAGAACAAAAAA GAACGACGCACTG-CATTTAC TTCTC GTTCACAACAGTGCGTCGTTG TGTGGGATGCATTAT TERM 2608 1576074 - 1576035 - H 73 -4.3 -4.86954 | gap 1, overlap 1576032 AAGAACAAAAAAGAA CGACGCACTG-CATTTAC TTCTC GTTCACAACAGTGCGTCG TTGTGTGGGATGCAT TERM 2609 1576182 - 1576212 + H 73 -8.6 -3.28368 | ACAATTCGAGTGTTT TTTATTACTTTTCT GAT AAAAAAGTAATAAA TCTTATAAGTTAGCT APL_1374 1576322 - 1577155 + | hypothetical protein oadG 1577337 - 1577594 + | oxaloacetate decarboxylase subunit gamma TERM 2610 1579042 - 1579020 - g 71 -7 -4.1585 | opp_overlap 1579023, overlap 1579023 1579033 GCAGAAGTTGCAAAA GAAGCGGC AAAACCG ACCGCTTC TCACACAGCAAAAGC oadA 1577610 - 1579418 + | pyruvate carboxylase subunit B TERM 2611 1579836 - 1579848 + G 71 -9.1 -3.31691 | overlap 1579830 AGTGGCGATTGGCTA CGGTG TTG CACCG TTAATCATCTTTATG TERM 2612 1580041 - 1580057 + G 71 -9.3 -3.05022 | GGTATTATCGGCGGT GCGGACG GCC CGACCGC TATCTATCTAGCAAG oadB 1579435 - 1580739 + | oxaloacetate decarboxylase beta chain TERM 2613 1580757 - 1580814 + F 100 -13.1 -4.89393 | gap 1, opp_overlap 1580761, overlap 1580758 1580761 GCTATATTTACATCA TTAAGCGGTCGTTTTTGAGGA-AATTTT TGC AAATTTATCTTCAAAACCGACCGCTTAC TTTTTATGGCGTTTC TERM 2614 1580758 - 1580813 + F 100 -16.6 -3.52551 | gap 1, opp_overlap 1580761, overlap 1580757 1580761 CTATATTTACATCAT TAAGCGGTCGTTTTTGAGGA-AATTTT TGC AAATTTATCTTCAAAACCGACCGCTTA CTTTTTATGGCGTTT TERM 2615 1580761 - 1580810 + F 100 -13.9 -3.88001 | gap 1, opp_overlap 1580761, overlap 1580758 1580757 TATTTACATCATTAA GCGGTCGTTTTTGAGGA-AATTTT TGC AAATTTATCTTCAAAACCGACCGC TTACTTTTTATGGCG TERM 2616 1580810 - 1580761 - f 87 -11.7 -3.25223 | gap 1, opp_overlap 1580758 1580757 1580761 TATTTACATCATTAA GCGGTCGTTTTTGAGGA-AATTTT TGC AAATTTATCTTCAAAACCGACCGC TTACTTTTTATGGCG phnA 1580872 - 1581195 + | alkylphosphonate uptake protein TERM 2617 1581224 - 1581241 + F 100 -9.1 -5.38326 | opp_overlap 1581224 TCGATTCATTTTAAA CGCTCAC TTCG GTGGGCG TTTTTCTTTCATTGC TERM 2618 1581400 - 1581411 + G 72 -7.2 -4.00465 | TCGGCAATTGCCGCC GCCG GCAT CGGC TATTTTTCACTTGTG ccp 1581367 - 1582767 + | cytochrome c peroxidase TERM 2619 1582773 - 1582759 - T 88 -7.2 -4.93547 | CTAACTAATGAAAAA GTGAAA TAA TTTCAC ATAAACAAGCGGTGG TERM 2620 1582782 - 1582821 + T 100 -18 -4.46072 | opp_overlap 1582782 ATTTCACATAAACAA GCGGTGGGATTTCTGCAA AATT TTGCAAACATCCCACCGC TTTCTATTTATTCAC TERM 2621 1582821 - 1582782 - T 100 -20.2 -4.15029 | opp_overlap 1582782 ATTTCACATAAACAA GCGGTGGGATTTCTGCAA AATT TTGCAAACATCCCACCGC TTTCTATTTATTCAC APL_1380 1583126 - 1582833 - | hypothetical protein TERM 2622 1583089 - 1583078 - G 86 -5.8 -5.40072 | overlap 1583079 TTGGTTGTAAAAAAA TCCG CAGG CGGA TGCCACACGGATTTT APL_1381 1583661 - 1583128 - | hypothetical protein TERM 2623 1583768 - 1583730 - R 93 -9.7 -4.08706 | opp_overlap 1583730 1583739, overlap 1583711 1583709 CCCTCATGATAGAAA GCGGTCGGATTTTGCAA TTTTT TTGCAAAATTTAACCGC TTGTCGCTAAAGCAT TERM 2624 1583730 - 1583768 + r 90 -11.9 -3.35798 | opp_overlap 1583711 1583709 1583730, overlap 1583739 CCCTCATGATAGAAA GCGGTCGGATTTTGCAA TTTTT TTGCAAAATTTAACCGC TTGTCGCTAAAGCAT APL_1382 1584124 - 1583783 - | hypothetical protein trmB 1584932 - 1584180 - | tRNA (guanine-N(7))-methyltransferase fabH 1585930 - 1584980 - | 3-oxoacyl-(acyl carrier protein) synthase III plsX 1586976 - 1585942 - | putative glycerol-3-phosphate acyltransferase PlsX TERM 2625 1586941 - 1586924 - G 93 -12.7 -3.19602 | overlap 1586922 GCCGGGATAGTAATA CGGGGAC CAAA GTCCCCG CCCATCACATCTAAC rpmF 1587171 - 1587001 - | 50S ribosomal protein L32 APL_1387 1587716 - 1587189 - | hypothetical protein TERM 2626 1587662 - 1587674 + g 80 -9.1 -4.06678 | CTTCGTAATCCATTC GACGC TGA GCGTC TTTATATGGGTCAAT TERM 2627 1588063 - 1588035 - g 80 -4.6 -5.24531 | opp_overlap 1588034 1588035 1588056 1588059 1588061 ACCGGTGATAAAAAA CCGAATCTTAAA GCGGT TTTTGGATTCGG CTTACTTGCCGTATT APL_1388 1587936 - 1588727 + | ABC transporter permease APL_1389 1588913 - 1590085 + | hypothetical protein TERM 2628 1590102 - 1590139 + F 100 -18 -5.4505 | opp_overlap 1590102 CCTCGTCTTATACAA GCGGTGGAATTTGCAA AAAATG TTGTAAATTCCACCGC TTTTTTATTAACCAG TERM 2629 1590139 - 1590102 - f 100 -15.8 -3.48276 | opp_overlap 1590102 CCTCGTCTTATACAA GCGGTGGAATTTGCAA AAAATG TTGTAAATTCCACCGC TTTTTTATTAACCAG TERM 2630 1590267 - 1590253 - f 83 -5.8 -5.10064 | opp_overlap 1590255 1590259, overlap 1590247 CCTAACAGATAAAAA TAGTTT TTT AAACTA AATTATCAACATAAA TERM 2631 1590692 - 1590704 + G 74 -6.2 -4.41616 | GGGCATCGTCACCGT GCGG CGGCT CCGC TTTCTTTCCGCCGCT TERM 2632 1590799 - 1590812 + G 74 -8.1 -3.95555 | TTATGCCGTCGTACT CGGCT GGGC AGCCG TTTATACCTACTTCT TERM 2633 1591303 - 1591316 + G 70 -9.5 -2.84126 | opp_overlap 1591302, overlap 1591302 1591295 GGTATTGGCAGGAAT CGGCG TATT CGCCG CTTTAGGCTTTATGG APL_1390 1590464 - 1591978 + | sodium-dependent transporter TERM 2634 1592102 - 1592146 + F 90 -11.7 -3.75571 | opp_overlap 1592106 1592110, overlap 1592110 TCATATCTATATCTT CAAACGAATACCGTTATTCCT TAT AAGAATAGCGGTATTTTTTTG TGTTTTACTCACTTC TERM 2635 1592138 - 1592110 - f 82 -9.7 -3.52472 | opp_overlap 1592102 1592110, overlap 1592106 ATATCTTCAAACGAA TACCGTTATTCCT TAT AAGAATAGCGGTA TTTTTTTGTGTTTTA TERM 2636 1592110 - 1592138 + F 100 -9.7 -5.9362 | opp_overlap 1592110 1592106, overlap 1592102 ATATCTTCAAACGAA TACCGTTATTCCT TAT AAGAATAGCGGTA TTTTTTTGTGTTTTA APL_1391 1592366 - 1593337 + | PTS system mannose-specific EIIAB component TERM 2637 1593507 - 1593492 - g 75 -6 -4.65895 | opp_overlap 1593492 TGGGTGATGTAAAAA CCGGCG TTAT CGTCGG CGGTTCTCTGGAATT ptnC 1593350 - 1594150 + | mannose permease IIC component ptnD 1594164 - 1595000 + | mannose-specific PTS system protein IID TERM 2638 1595017 - 1595072 + F 88 -7.2 -5.18409 | gap 1, opp_overlap 1595013 1595020 1595049, overlap 1595013 AAATATCTAAACCAC TAAGCGGTCATATTTTTATCAAATTTT GCA AATTTTTGACGAAAA-ATGACCGCTTG TTTCTTTTTATTTTC APL_1394 1595099 - 1595557 + | hypothetical protein TERM 2639 1595881 - 1595862 - g 86 -7.8 -4.7373 | TCACCCGACTAAAAA CGAAGCCG AGTA CGGATTCG AACAAGAAAATTTAC manA 1595554 - 1596759 + | mannose-6-phosphate isomerase TERM 2640 1596916 - 1596900 - g 100 -9.5 -4.72029 | CTGAAGGCAATAAAA TTCAACC GAC GGTTGAA CATAAATCAGTAACG APL_1396 1596821 - 1597336 + | hypothetical protein APL_1397 1598262 - 1597474 - | hypothetical protein TERM 2641 1598161 - 1598173 + g 70 -5.5 -4.45485 | opp_overlap 1598161, overlap 1598150 AGGGGCTTTTAAGAA GGCTT TAG GAGCC TTTTCTAAATATCGT TERM 2642 1598450 - 1598412 - R 100 -12.6 -4.64766 | opp_overlap 1598413, overlap 1598413 TTCATATTTCAAAAA GGTAGGTTAAAGCCTTGT ACT ATAAGGCTTTAACCCACT TTTTACCAACCTTTT TERM 2643 1598449 - 1598413 - R 100 -16.1 -3.38378 | opp_overlap 1598413, overlap 1598412 TCATATTTCAAAAAG GTAGGTTAAAGCCTTGT ACT ATAAGGCTTTAACCCAC TTTTTACCAACCTTT TERM 2644 1598413 - 1598449 + r 100 -16.1 -4.58685 | opp_overlap 1598413 1598412 TCATATTTCAAAAAG GTAGGTTAAAGCCTTGT ACT ATAAGGCTTTAACCCAC TTTTTACCAACCTTT TERM 2645 1598509 - 1598490 - R 100 -10 -5.79595 | opp_overlap 1598485 1598490 TGCCAAAACAAAAAA GGCGTGTC TTTC AACACGCC TTCTCTTTTAGCATT TERM 2646 1598490 - 1598509 + r 85 -9.3 -3.97108 | opp_overlap 1598490, overlap 1598485 TGCCAAAACAAAAAA GGCGTGT CTTTCA ACACGCC TTCTCTTTTAGCATT tufB 1599738 - 1598554 - | elongation factor Tu TERM 2647 1599782 - 1599761 - R 73 -7.2 -4.06419 | opp_overlap 1599761 GCTTCCTAGAAATAA GCCTCCGC CCTATT GCCGAGGC TTTAGTTAAAAGATA TERM 2648 1599761 - 1599782 + r 73 -7.2 -3.90588 | opp_overlap 1599761 GCTTCCTAGAAATAA GCCTCCGC CCTATT GCCGAGGC TTTAGTTAAAAGATA fusA 1601905 - 1599800 - | elongation factor G TERM 2649 1601180 - 1601197 + g 85 -7.1 -4.77896 | TTCTTCTTCGGTTAA TTCTTCA CCGC TGAAGAA TTTTTCCATTAATTC TERM 2650 1601987 - 1601949 - R 77 -9.6 -2.96298 | opp_overlap 1601945, overlap 1601948 ATGAGTTTAAATAAG GGTAAGGCTTCATCGCAA ATT TTGTGATGAAGCCCTGCA AGCATATTGCTAAAC rpsG 1602475 - 1602005 - | 30S ribosomal protein S7 rpsL 1602986 - 1602612 - | 30S ribosomal protein S12 TERM 2651 1603051 - 1603028 - R 87 -6.8 -5.52347 | overlap 1603030 AATAAAATTAAAAAA TATCCTTTCA AAGA CGAAAGGACA GTAAATTCTAGTGTT TERM 2652 1603049 - 1603030 - R 78 -7.2 -4.35313 | overlap 1603028 TAAAATTAAAAAATA TCCTTTCA AAGA CGAAAGGA CAGTAAATTCTAGTG rfaC 1604067 - 1603108 - | ADP-heptose:LPS heptosyl transferase I TERM 2653 1603376 - 1603401 + g 74 -6.8 -4.28791 | overlap 1603394 GTCACATTGGTATTC GCTTGCGCCA AACGTA TCGCGCGAGC TTTCTCTTGTGCATT TERM 2654 1604139 - 1604095 - R 79 -9.3 -3.43218 | overlap 1604091 1604098 1604108 1604117 CATAATGAATACGAA CAAGCGGTCGAAATCTGCAAA ATT TTTGCAAAAAATGACCGCTTG CAATTAGCCTAATAA rfaF 1605180 - 1604143 - | ADP-heptose:LPS heptosyltransferase II TERM 2655 1604294 - 1604272 - G 73 -9.9 -2.94804 | overlap 1604271 1604274 AATTAAACGAATAAT CACCGCTTT ATCGG AAAGCGGCG GCGTATATTGCGGGC TERM 2656 1604635 - 1604653 + g 79 -11 -3.07029 | opp_overlap 1604630 CGGGCAGAAGCCGAT TGCCGGAC GCT GTTCGGCA TATTCAAACTGTTTG oapB 1605666 - 1605262 - | opacity associated protein B TERM 2657 1605754 - 1605776 + r 74 -9.2 -3.02508 | opp_overlap 1605724 1605754, overlap 1605756 ATATTAAAAGAAAAA GAGCAACG GCTATAG CGTTGCTC TGTGATATTTCTTAT TERM 2658 1605776 - 1605754 - R 100 -9.2 -5.52079 | opp_overlap 1605754 1605756, overlap 1605724 ATATTAAAAGAAAAA GAGCAACG GCTATAG CGTTGCTC TGTGATATTTCTTAT oapA 1607179 - 1605788 - | opacity associated protein A TERM 2659 1607141 - 1607153 + g 71 -9.1 -3.35046 | overlap 1607139 ATTTGCGGACGGCTC GCCGA ATG TCGGC TCTTTACGGAGATGA comEA 1607480 - 1607824 + | DNA uptake protein TERM 2660 1607842 - 1607830 - f 89 -3.3 -5.88565 | opp_overlap 1607834 GTTAGAATAAAAAAA TCCGC TGA GCCGA CCGTCAATACTCATA psd 1607975 - 1608868 + | phosphatidylserine decarboxylase TERM 2661 1608886 - 1608910 + F 78 -7.2 -4.3739 | opp_overlap 1608888, overlap 1608888 ATCTTCTAGCTAAAA AAGCACGATT CTGGT AATCGTGCTC TTTTATAACCAAATC TERM 2662 1608888 - 1608908 + F 83 -9.8 -3.79419 | opp_overlap 1608888, overlap 1608886 CTTCTAGCTAAAAAA GCACGATT CTGGT AATCGTGC TCTTTTATAACCAAA TERM 2663 1608908 - 1608888 - f 100 -9.8 -5.08824 | opp_overlap 1608888 1608886 CTTCTAGCTAAAAAA GCACGATT CTGGT AATCGTGC TCTTTTATAACCAAA TERM 2664 1609538 - 1609526 - g 86 -7.7 -4.6759 | opp_overlap 1609533, overlap 1609516 AATACCCCAATAAAA TTGCG TTC CGCAA TGCGCTATATATGAA TERM 2665 1609811 - 1609801 - g 71 -4 -4.82901 | TTGTTGGCAGAAAAA GAAT TCT ATTC AAACGTTCGTTTACG gshA 1609024 - 1611297 + | bifunctional glutamate--cysteine ligase/glutathione synthetase TERM 2666 1611350 - 1611305 - T 100 -17.1 -4.8622 | opp_overlap 1611309, overlap 1611306 TGCCTTAATCAAAAA TCAAGCGGTCAAATTTGCAGA AAAT TTTGCAAATTCGACCGCTTGT AACATGATAGATATC TERM 2667 1611349 - 1611306 - T 100 -20.6 -3.5125 | opp_overlap 1611309, overlap 1611305 GCCTTAATCAAAAAT CAAGCGGTCAAATTTGCAGA AAAT TTTGCAAATTCGACCGCTTG TAACATGATAGATAT TERM 2668 1611309 - 1611346 + T 100 -16.5 -3.34043 | opp_overlap 1611306 1611305 TTAATCAAAAATCAA GCGGTCAAATTTGCAGA AAAT TTTGCAAATTCGACCGC TTGTAACATGATAGA APL_1409 1612009 - 1611389 - | CueR-like transcriptional regulator tnaB 1612209 - 1613411 + | ttryptophan-specific transport protein TERM 2669 1613468 - 1613443 - T 100 -8.3 -5.8901 | opp_overlap 1613446, overlap 1613446 ACAGAAAACAAAAAA TAAGGGGCAAC CAAT ATTGCCCCTTT GTCTTTTTATCTGAC TERM 2670 1613465 - 1613446 - T 100 -10 -4.94109 | opp_overlap 1613446, overlap 1613443 GAAAACAAAAAATAA GGGGCAAC CAAT ATTGCCCC TTTGTCTTTTTATCT TERM 2671 1613446 - 1613465 + T 93 -9.3 -4.62163 | opp_overlap 1613446 1613443 GAAAACAAAAAATAA GGGGCAA CCAATA TTGCCCC TTTGTCTTTTTATCT APL_1411 1613768 - 1613475 - | hypothetical protein TERM 2672 1613590 - 1613603 + g 82 -6.7 -4.78661 | TGAATAACACAAGCC TCGGT TTCC ACCGA TTTTGCTTTTTCAGT APL_1412 1613908 - 1614810 + | putative oxidoreductase TERM 2673 1614823 - 1614871 + T 71 -8.9 -3.04988 | opp_overlap 1614824 1614825, overlap 1614822 TAGATAACTGAGATA AGCAAGCGGTCGAATTTTGTAAA TTT TTAGCAAAATCCGGCCGCTTGAA ATTATTTATACATCG TERM 2674 1614870 - 1614824 - T 89 -11.1 -3.56959 | gap 1, opp_overlap 1614823 1614822, overlap 1614825 AGATAACTGAGATAA GCAAGCGGTCGAATTTTG-TAA ATTT TTAGCAAAATCCGGCCGCTTGA AATTATTTATACATC TERM 2675 1614869 - 1614825 - T 95 -14.6 -2.73453 | gap 1, opp_overlap 1614823 1614822, overlap 1614824 GATAACTGAGATAAG CAAGCGGTCGAATTTTG-TAA ATTT TTAGCAAAATCCGGCCGCTTG AAATTATTTATACAT APL_1413 1616648 - 1614873 - | putative long-chain-fatty-acid--CoA ligase TERM 2676 1615327 - 1615339 + g 74 -6.2 -4.56775 | overlap 1615337 TGCGCATCAAATTCG CCGG CATCA CCGG TTTTTAAGAAACCGT TERM 2677 1615902 - 1615892 - G 76 -6.8 -4.56978 | overlap 1615894 CTTCCAAATAACAAA CGGT CGC ACCG CGATAAAGCACATAA TERM 2678 1616766 - 1616824 + r 100 -10.8 -4.63172 | gap 3, opp_overlap 1616766 1616767, overlap 1616767 1616770 GAGTTTGCTCAAAAA -GCAAGCGGTCGAATT-TTCGGATAAATT TGCA AAATT-TCCGAAAAATTCGACCGCTTGTA TTTTCTAATTTGCTA TERM 2679 1616823 - 1616766 - R 100 -15.3 -4.57073 | gap 1, opp_overlap 1616766 1616767 1616770, overlap 1616767 GAGTTTGCTCAAAAA GCAAGCGGTCGAATTTTCGGATAAATTT GCA AAATTT-CCGAAAAATTCGACCGCTTGT ATTTTCTAATTTGCT TERM 2680 1616767 - 1616822 + r 100 -18.1 -3.9151 | opp_overlap 1616767 1616766, overlap 1616766 1616770 AGTTTGCTCAAAAAG CAAGCGGTCGAATT-TTCGGATAAATT TGCA AAATT-TCCGAAAAATTCGACCGCTTG TATTTTCTAATTTGC TERM 2681 1616822 - 1616767 - R 100 -18.8 -3.33922 | gap 1, opp_overlap 1616766 1616767 1616770, overlap 1616766 AGTTTGCTCAAAAAG CAAGCGGTCGAATTTTCGGATAAATTT GCA AAATTT-CCGAAAAATTCGACCGCTTG TATTTTCTAATTTGC TERM 2682 1616770 - 1616819 + r 100 -14 -4.05091 | opp_overlap 1616767 1616766, overlap 1616767 1616766 TTGCTCAAAAAGCAA GCGGTCGAATT-TTCGGATAAATT TGCA AAATT-TCCGAAAAATTCGACCGC TTGTATTTTCTAATT mqo 1618304 - 1616829 - | malate:quinone oxidoreductase APL_1415 1618825 - 1618412 - | hypothetical protein TERM 2683 1619306 - 1619286 - g 75 -3.3 -5.1634 | ACAAATATAGAAAAA TACATCG CGACGAC CGACGTA AATATCACAAAAAAG APL_1416 1619045 - 1619386 + | hypothetical protein APL_1417 1619428 - 1619853 + | hypothetical protein TERM 2684 1619905 - 1619868 - T 100 -9.9 -5.4756 | AACGGCAATAAAAAA GCGGTACGATTTGCAAA AAAT CTTGCAAAAAGCACCGC TTGGACAAGGACAAT mglC 1620934 - 1619924 - | beta-methylgalactoside transporter inner membrane component TERM 2685 1620960 - 1620979 + r 78 -7.2 -4.44667 | opp_overlap 1620960 1620958, overlap 1620962 TTGCTTTTATAAATA TTTTGCAG CGAG CTGCAAGA TTTCTTCTTGAGAAG mglA 1622450 - 1620951 - | galactose/methyl galaxtoside transporter ATP-binding protein TERM 2686 1621383 - 1621366 - G 72 -7.1 -3.97331 | AACTTACCTAAATAA GATTTCA TATT TGAAATC AACGAGTTAAATTCG TERM 2687 1622500 - 1622478 - R 100 -16.4 -5.30686 | opp_overlap 1622493 1622497 AATACCGATAAAAAA GGCACGAGTA GCC TACTCGTGCC TCATCGAGTCAATTA mglB 1623505 - 1622513 - | D-galactose-binding periplasmic protein precursor TERM 2688 1623686 - 1623734 + r 95 -12.8 -3.78329 | gap 1, opp_overlap 1623686 1623697, overlap 1623694 1623696 TATGGAGGGATATTA TCAATAAAAAA-CCGAACTCCGT ATAA ACGGAATTCGGCTCTTTTATTGA TTTAAGTTACTAAAA TERM 2689 1623734 - 1623686 - R 100 -17.2 -2.64933 | gap 1, opp_overlap 1623686 1623694 1623696, overlap 1623697 TATGGAGGGATATTA TCAATAAAA-AACCGAACTCCGT ATAA ACGGAATTCGGCTCTTTTATTGA TTTAAGTTACTAAAA TERM 2690 1623694 - 1623725 + r 81 -5.8 -4.84642 | opp_overlap 1623686 1623697, overlap 1623686 1623696 GATATTATCAATAAA AAACCGAACTCCGT ATAA ACGGAATTCGGCTC TTTTATTGATTTAAG TERM 2691 1623696 - 1623723 + r 79 -8.4 -4.03104 | opp_overlap 1623686 1623697, overlap 1623694 1623686 TATTATCAATAAAAA ACCGAACTCCGT ATAA ACGGAATTCGGC TCTTTTATTGATTTA TERM 2692 1623722 - 1623697 - R 100 -14.1 -5.52023 | opp_overlap 1623696 1623694 1623686, overlap 1623686 ATTATCAATAAAAAA CCGAACTCCGT ATAA ACGGAATTCGG CTCTTTTATTGATTT ompA 1624865 - 1623759 - | outer membrane protein P5 precursor TERM 2693 1625163 - 1625174 + H 71 -3 -5.16237 | ATGTAATAAAGTGTA TAGA AAAG TCTA TTTTTTAATCAAATT TERM 2694 1626295 - 1626305 + G 71 -6.8 -4.15044 | GACATTATTTGGCAT TCGG TGT CCGA TTTATTAACCGAAGA TERM 2695 1626510 - 1626494 - g 77 -3.7 -5.08824 | CCTCGATCGAAAAAA TTTATGC AAT GCGTAAA AAAGCGGTCGGTTTA APL_1422 1625293 - 1628382 + | hypothetical protein TERM 2696 1628407 - 1628429 + F 78 -10.6 -2.6155 | overlap 1628406 AACAAATCTCCCCTA ACCCCTCTTT ACT AAAGAGGGGG ATTAATATTGAAGGG APL_1423 1628515 - 1628940 + | hypothetical protein TERM 2697 1628956 - 1629004 + F 71 -9 -3.01712 | gap 1, opp_overlap 1628996, overlap 1628962 1628996 TATCCTATCCTGCAA GCGGTCGAATTTGGTCAAGTTTT GCAA AATTCTTG-CTAAATCCGACCGC TATTCGCAAAAAAAG TERM 2698 1629673 - 1629659 - g 74 -7 -4.32649 | ATGTGAAAAACCAAA CGGCGG CAA CCGTCG AAGTTCAGCCTTACG TERM 2699 1630580 - 1630594 + G 73 -8.6 -3.60967 | overlap 1630577 TAATGACCTTTATGC CGGTAA TGT TTACCG TATTCTTCTTATGGT oxaA 1629241 - 1630722 + | putative inner membrane protein translocase component YidC TERM 2700 1630736 - 1630789 + T 86 -12.7 -2.66451 | gap 1, opp_overlap 1630732 1630741 1630743, overlap 1630743 AAACGAGATAATATT TAAAATATCCGCACGCCGAATCGGAA TTA TTCCT-TTTAGCGTGCGGATTTTTTA TGCCTTTAAGTCGGT TERM 2701 1630784 - 1630741 - T 83 -8.2 -4.31043 | gap 1, opp_overlap 1630736 1630743, overlap 1630732 1630743 AGATAATATTTAAAA TATCCGCACGCCGAATCGGAA TTA TTCCTTTT-AGCGTGCGGATT TTTTATGCCTTTAAG TERM 2702 1630782 - 1630743 - T 90 -10.8 -3.74703 | gap 1, opp_overlap 1630736 1630743, overlap 1630741 ATAATATTTAAAATA TCCGCACGCCGAATCGGAA TTA TTCCTTTT-AGCGTGCGGA TTTTTTATGCCTTTA TERM 2703 1630743 - 1630782 + T 100 -10.8 -5.33866 | gap 1, opp_overlap 1630743 1630741, overlap 1630736 ATAATATTTAAAATA TCCGCACGCCGAATCGGAA TTA TTCCT-TTTAGCGTGCGGA TTTTTTATGCCTTTA TERM 2704 1630976 - 1630945 - T 93 -8.1 -5.45652 | opp_overlap 1630945 ATCGCCAATAAAAAA GGACCGAGTTTTA TATATC TTAAACTCGATCC TTAACTTGTTATTCC napC 1631621 - 1631007 - | cytochrome c-type protein NapC TERM 2705 1631474 - 1631491 + g 76 -9.9 -3.26546 | opp_overlap 1631472 1631470, overlap 1631473 CATTCATATGACAGT CCGAACA GAAT TGTTCGG TATTGGTATGTTCTA napB 1632055 - 1631633 - | nitrate reductase cytochrome c-type subunit TERM 2706 1631681 - 1631694 + g 74 -6.7 -4.33417 | opp_overlap 1631681 1631680 TTTATTTTGAATAAT CGGAT TTAC ATCCG TTTGTTGTACGTGGC napH 1632967 - 1632074 - | quinol dehydrogenase membrane component napG 1633872 - 1632967 - | quinol dehydrogenase periplasmic component TERM 2707 1633997 - 1633961 - R 75 -9.6 -2.59881 | gap 1, opp_overlap 1633961 1633957, overlap 1633960 TACTCACCCTACAAG CGGCCGG-ATTTTCAAA AAAC TTTGTAAATTCCGACCG TATGTTTCATTACGC napA 1636490 - 1634007 - | nitrate reductase TERM 2708 1636066 - 1636079 + g 70 -3.8 -4.81306 | opp_overlap 1636066, overlap 1636068 CCTGATGAGAACATA CCGA CCGAAT TCGG TTCTTTTTTCTTCAG TERM 2709 1636068 - 1636082 + g 78 -2.1 -5.45652 | gap 1, opp_overlap 1636066, overlap 1636066 TGATGAGAACATACC G-ACCG AATT CGGTTC TTTTTTCTTCAGAAT napD 1636791 - 1636522 - | putative napD protein napF 1637324 - 1636794 - | ferredoxin-type protein NapF TERM 2710 1636968 - 1636983 + g 74 -4 -5.04868 | TCTACATTCAACCCG CTGTTT TAAT AAGCAG TTTTCTTTAATTTCG APL_1432 1637523 - 1638098 + | putative NAD(P)H oxidoreductase TERM 2711 1638243 - 1638275 + T 100 -12.1 -4.5852 | opp_overlap 1638243 GACTGTTTAATTTAA GGACTGAGTTCTGTA TTG TACAGGGCTGAGTCC TTTTAATTTCACTTG APL_1433 1639016 - 1638234 - | transposase TERM 2712 1638889 - 1638871 - G 71 -2.4 -5.09225 | ATCGCACCCAAAAAA TCACGTAA CTT TAACGTAA TACGACGATAGCCGT APL_1434 1639567 - 1639058 - | hypothetical protein APL_1435 1640185 - 1639673 - | hypothetical protein TERM 2713 1640323 - 1640302 - R 100 -13.1 -5.14563 | opp_overlap 1640302, overlap 1640284 TTTTTGATGAAAAAA GCCGATTGA AGTT TCAATCGGC TTTCGATCCAAAAGA TERM 2714 1640302 - 1640323 + r 95 -13.1 -3.64703 | opp_overlap 1640284 1640302 TTTTTGATGAAAAAA GCCGATTGA AGTT TCAATCGGC TTTCGATCCAAAAGA rne 1643333 - 1640346 - | ribonuclease E TERM 2715 1640615 - 1640651 + g 71 -3 -4.94902 | gap 1 CTTCCGCCGTAGCAT TTCCAATTGCCGG-GAC TTGT GTCGCTTGCGCTTGGAA TTTTTGTACTCGTTC TERM 2716 1640723 - 1640713 - G 77 -4.6 -4.99043 | overlap 1640714 TGTTGAGAAACAAAA CCGC CTA ACGG CGCAACGTGTTTTGC TERM 2717 1640862 - 1640850 - G 71 -6.9 -4.15044 | opp_overlap 1640859 1640861, overlap 1640859 TTGCTGTTTAATAAA GCCGA CAA CCGGC GCAACGGAACTTGCG TERM 2718 1643289 - 1643266 - G 70 -6 -4.29326 | gap 1, overlap 1643282 TCTAAATCGAATAAA CGTTGCCCGTC AAC GA-GCGCAACG CGCAACTCTTCTTTT TERM 2719 1643934 - 1643915 - g 80 -2.9 -5.4756 | AAGCCGAACAAAAAA TTGCTCA ATTAGA TGAACAA CTTGCAAAATCTCAG APL_1437 1643803 - 1644810 + | hypothetical protein TERM 2720 1644869 - 1644824 - T 100 -15.7 -4.64076 | opp_overlap 1644825 1644828, overlap 1644825 AATTAAACCATAAAA GCAAGCGGTCAAATTTGCAGA AAAT TTTGCAAATTTAACCGCTTGT TATTTGGTGTTTATT TERM 2721 1644825 - 1644868 + T 100 -19.2 -4.13037 | opp_overlap 1644824 1644825, overlap 1644828 ATTAAACCATAAAAG CAAGCGGTCAAATTTGCAGA AAAT TTTGCAAATTTAACCGCTTG TTATTTGGTGTTTAT TERM 2722 1644868 - 1644825 - T 100 -19.2 -3.36819 | opp_overlap 1644825 1644828, overlap 1644824 ATTAAACCATAAAAG CAAGCGGTCAAATTTGCAGA AAAT TTTGCAAATTTAACCGCTTG TTATTTGGTGTTTAT TERM 2723 1644828 - 1644865 + T 100 -15.1 -4.15114 | opp_overlap 1644825 1644824, overlap 1644825 AAACCATAAAAGCAA GCGGTCAAATTTGCAGA AAAT TTTGCAAATTTAACCGC TTGTTATTTGGTGTT APL_1438 1645401 - 1644880 - | hypothetical protein TERM 2724 1645393 - 1645381 - G 72 -6.3 -4.36372 | AAAAAAGCTAATAAA GGTAA GAT TTACC AGTAACATAAGTTCT ubiD 1647014 - 1645551 - | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase TERM 2725 1646158 - 1646179 + g 72 -7.3 -3.91911 | gap 1 TAGCCAGTATGATCG CCGTAC-GGA CCT TCCAGTGCGG TTTCATTCGGGTCAA TERM 2726 1646440 - 1646424 - G 76 -10.1 -3.36823 | TTCGTGAAAATCCAA CGCACCG CCA CGATGCG ATAACCAACGCATAA TERM 2727 1646492 - 1646507 + g 81 -5.4 -5.24129 | opp_overlap 1646492 1646493, overlap 1646493 GTTGTTGGCGATAAA TGCCAA GATT TTGGCG TTTTTTATAAGGCCC TERM 2728 1647596 - 1647576 - g 73 -8.3 -3.58864 | overlap 1647574 1647577 CGACGATCATAAACA CGACCATGC AGG GCATGATCA TCACCATGATCATGA TERM 2729 1647595 - 1647577 - g 70 -9.6 -2.74836 | overlap 1647576 1647574 GACGATCATAAACAC GACCATGC AGG GCATGATC ATCACCATGATCATG znuA 1647160 - 1648137 + | high-affinity zinc transporter periplasmic component TERM 2730 1648192 - 1648151 - T 71 -5.4 -4.53705 | gap 1, opp_overlap 1648151 AATCGGCAGATAAAA GGCATAG-TAGACAAAA AGGTTGGTA TTTTGTCGAACTATGCC TCTATTGGACAAAAG APL_1441 1648847 - 1648236 - | hypothetical protein TERM 2731 1649212 - 1649174 - R 100 -12.6 -4.64766 | opp_overlap 1649175, overlap 1649175 TTCATATTTCAAAAA GGTAGGTTAAAGCCTTGT ACT ATAAGGCTTTAACCCACT TTTTACCAACCTTTT TERM 2732 1649175 - 1649211 + r 100 -16.1 -4.58685 | opp_overlap 1649174 1649175 TCATATTTCAAAAAG GTAGGTTAAAGCCTTGT ACT ATAAGGCTTTAACCCAC TTTTTACCAACCTTT TERM 2733 1649211 - 1649175 - R 100 -16.1 -3.38378 | opp_overlap 1649175, overlap 1649174 TCATATTTCAAAAAG GTAGGTTAAAGCCTTGT ACT ATAAGGCTTTAACCCAC TTTTTACCAACCTTT apxID 1650714 - 1649278 - | RTX-I toxin secretion component apxIB 1652846 - 1650723 - | toxin RTX-I translocation ATP-binding protein TERM 2734 1651864 - 1651880 + g 80 -6.5 -4.8048 | overlap 1651866 AAGAATGACTGATTG TCCGCAC CAC GTGCGAA TTTTTCATCTAAACG TERM 2735 1652383 - 1652363 - G 87 -4.8 -5.4477 | AAATTTGCAAAAAAA TTGAAACA ATTAA CGTTTCAA TAAAAATCTTACGAT TERM 2736 1652903 - 1652867 - R 100 -10.4 -4.99043 | opp_overlap 1652867 CCTCCATAAATAAAA TAGCAATCCTACACAC CTAAT ATATATAGGATTGCTA TTAATCATTTAAAAA apxIA 1655995 - 1652927 - | RTX-I toxin determinant A TERM 2737 1654855 - 1654818 - G 100 -14.1 -3.95852 | ATTGCACTAACTAAA GCTGCTACCGGCGCACC GACT AATGAGCCGGTTGCAGC AGCCCCAACACCTGC apxIC 1656523 - 1656005 - | RTX-I toxin-activating lysine-acyltransferase ApxIC TERM 2738 1657055 - 1657044 - g 78 -5.8 -4.80853 | opp_overlap 1657043, overlap 1657030 AGCGGAAAAAAATAA TCCG CAAG CGGA CGTTTGGTACGGCGG TERM 2739 1657540 - 1657528 - g 71 -4.1 -4.83615 | TATGCGTTAGAAAAA GAACA GGG TGCTC CGCTTGAAATGGTTG TERM 2740 1657710 - 1657687 - g 88 -6.8 -5.09225 | gap 1 ACCGCATGGAAAAAA GGTCAAGCGTT ACA AACGCT-AACC AATACCACGGCTGAA afuA 1656814 - 1657854 + | ABC-type Fe3+ transport system, periplasmic component TERM 2741 1658705 - 1658723 + G 71 -4.5 -4.67755 | TTTAATGCTTGGTCG TTCGGGC TACGT GACCGAA TTTTTAGATACCTAT afuB 1657959 - 1660022 + | ferric transport system permease protein fbpB fbpC 1660069 - 1661115 + | ferric transporter ATP-binding subunit TERM 2742 1661179 - 1661202 + T 95 -14.6 -2.7728 | opp_overlap 1661177 CCACTTTAAGATATT GTAGGGCGGG AATA TCCGCCCTAC TCGTTAAGCTTTCAA mpl 1662570 - 1661206 - | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase TERM 2743 1661681 - 1661645 - G 76 -9.4 -3.46824 | gap 1 GCATTAATGAATGAA CCGAGCGCATCGCAAGC ACCT GCTACCGATACGC-CGG CGTGATGTGCCGCGG fbp 1662693 - 1663697 + | fructose-1,6-bisphosphatase TERM 2744 1663718 - 1663739 + T 100 -8.7 -5.80817 | opp_overlap 1663718 AGATAAAACAAAAAA CCGAACGCT TTAA AACGTTCGG TTTTTTTATATTAAG TERM 2745 1663739 - 1663718 - T 100 -10.9 -5.8901 | opp_overlap 1663718 AGATAAAACAAAAAA CCGAACGCT TTAA AACGTTCGG TTTTTTTATATTAAG APL_1451 1664464 - 1663853 - | hypothetical protein TERM 2746 1664829 - 1664791 - R 100 -12.6 -4.64766 | opp_overlap 1664792, overlap 1664792 TTCATATTTCAAAAA GGTAGGTTAAAGCCTTGT ACT ATAAGGCTTTAACCCACT TTTTACCAACCTTTT TERM 2747 1664828 - 1664792 - R 100 -16.1 -3.38378 | opp_overlap 1664792, overlap 1664791 TCATATTTCAAAAAG GTAGGTTAAAGCCTTGT ACT ATAAGGCTTTAACCCAC TTTTTACCAACCTTT TERM 2748 1664792 - 1664828 + r 100 -16.1 -4.58685 | opp_overlap 1664792 1664791 TCATATTTCAAAAAG GTAGGTTAAAGCCTTGT ACT ATAAGGCTTTAACCCAC TTTTTACCAACCTTT TERM 2749 1664865 - 1664914 + r 100 -13.1 -4.56961 | opp_overlap 1664868 1664871, overlap 1664868 1664871 ACTATGCCAGATAAA AAATAAGCGGTGAAATTTGCATA AAAC TTTGCAAATTTCACCGCTTGTCA TTTTGTATAAATATT TERM 2750 1664868 - 1664911 + r 100 -19.2 -3.22496 | opp_overlap 1664868 1664871, overlap 1664865 1664871 ATGCCAGATAAAAAA TAAGCGGTGAAATTTGCATA AAAC TTTGCAAATTTCACCGCTTG TCATTTTGTATAAAT TERM 2751 1664911 - 1664868 - R 100 -17 -5.37043 | opp_overlap 1664865 1664868 1664871, overlap 1664871 ATGCCAGATAAAAAA TAAGCGGTGAAATTTGCATA AAAC TTTGCAAATTTCACCGCTTG TCATTTTGTATAAAT TERM 2752 1664871 - 1664908 + r 100 -18.7 -3.74012 | opp_overlap 1664868 1664871, overlap 1664868 1664865 CCAGATAAAAAATAA GCGGTGAAATTTGCATA AAAC TTTGCAAATTTCACCGC TTGTCATTTTGTATA TERM 2753 1664908 - 1664871 - R 100 -18.7 -4.77122 | opp_overlap 1664871 1664868 1664865, overlap 1664868 CCAGATAAAAAATAA GCGGTGAAATTTGCATA AAAC TTTGCAAATTTCACCGC TTGTCATTTTGTATA serA 1666157 - 1664928 - | D-3-phosphoglycerate dehydrogenase rpiA 1666960 - 1666301 - | ribose-5-phosphate isomerase A TERM 2754 1667096 - 1667057 - R 100 -21 -4.00868 | opp_overlap 1667057 1667048 TTAGTGATAAGCAAA GCGGTCGAATTTCCGCAA ATTT TTGCAAAAATTCGACCGC TTGTCATCAGTTAGT TERM 2755 1667057 - 1667096 + r 100 -16.6 -3.44586 | opp_overlap 1667057, overlap 1667048 TTAGTGATAAGCAAA GCGGTCGAATTTCCGCAA ATTT TTGCAAAAATTCGACCGC TTGTCATCAGTTAGT mrsA 1668441 - 1667107 - | phosphoglucosamine mutase TERM 2756 1668244 - 1668220 - G 90 -10.7 -3.92373 | overlap 1668231 CATTGGACCGACAAA TGCAGCGGAAA GAC CTGCCGCTGCA AGCCCCGCTTCTAAT ilvA 1670039 - 1668513 - | threonine dehydratase TERM 2757 1669769 - 1669785 + g 78 -9.4 -3.72576 | opp_overlap 1669767 GTTTTGATGAAAGCG CCACGC CTTGA GCGTGG TTTCCTGCCGAAGCG TERM 2758 1670145 - 1670122 - R 100 -14.6 -5.34208 | AAAAAAAACTAAAAA GGCACAAGCG ATAA CGCTTGCGCC AATGATGAAATAAAA TERM 2759 1670187 - 1670166 - R 70 -3.7 -4.88687 | gap 1, overlap 1670167 1670169 TGAAATAAAAAAGAA TTAGTGGTGG TGA CCGCCAC-AA CCGCAACCGCCATGC slyD 1670762 - 1670166 - | FKBP-type peptidyl-prolyl cis-trans isomerase SlyD TERM 2760 1670882 - 1670856 - R 83 -5.9 -5.15682 | gap 1, opp_overlap 1670857 1670859, overlap 1670857 AAAATAGAAATAAAA TGACCGCTTCGT TAAA AC-AAGCGGTCT GATTTTGCACGAAAT TERM 2761 1670881 - 1670857 - R 80 -9.4 -3.65749 | gap 1, opp_overlap 1670857 1670859, overlap 1670856 AAATAGAAATAAAAT GACCGCTTCGT TAAA AC-AAGCGGTC TGATTTTGCACGAAA TERM 2762 1670857 - 1670881 + r 74 -9.4 -3.08032 | gap 1, opp_overlap 1670856 1670857, overlap 1670859 AAATAGAAATAAAAT GACCGCTTCGT TAAA AC-AAGCGGTC TGATTTTGCACGAAA TERM 2763 1671075 - 1671097 + r 100 -16.4 -3.31322 | opp_overlap 1671077 1671079 GTCCGATGTTCGATA TACAGTGCCG AAA CGGCACTGTA TTATAAGAGATTAGA TERM 2764 1671095 - 1671077 - R 95 -14.6 -2.87931 | opp_overlap 1671075, overlap 1671079 CCGATGTTCGATATA CAGTGCCG AAA CGGCACTG TATTATAAGAGATTA TERM 2765 1671093 - 1671079 - R 84 -11.4 -2.9914 | opp_overlap 1671075, overlap 1671077 GATGTTCGATATACA GTGCCG AAA CGGCAC TGTATTATAAGAGAT aqpZ 1671801 - 1671115 - | aquaporin Z TERM 2766 1671845 - 1671830 - R 82 -9 -4.03321 | opp_overlap 1671829 1671832, overlap 1671825 ATATTAAAGATTAAA TGGCAC TTAA GTGCCA GTGCTTTCCAATCAC APL_1458 1672663 - 1671947 - | hypothetical protein APL_1459 1673460 - 1672705 - | hypothetical protein TERM 2767 1673294 - 1673277 - G 72 -6.3 -4.25074 | opp_overlap 1673277 GATGAAATTGGAAAA TCAGCCA TAAA TGACTGA ATTGCTCGATACCTC TERM 2768 1673780 - 1673802 + G 100 -14.2 -3.17075 | ATCGTACATTCCCAA TTGTGTCCGC ACT GCGGACGCAA TTAAATTGGACCCAA APL_1460 1673509 - 1674525 + | hypothetical protein TERM 2769 1674760 - 1674732 - g 75 -8.9 -3.62096 | gap 1, overlap 1674749 1674750 GGCGATCACGTCAAA GGCTCCGACACG AAAGAG CGTATCGG-GCC GTTACGAGCGATTCA menA 1674525 - 1675433 + | 1,4-dihydroxy-2-naphthoate octaprenyltransferase TERM 2770 1675493 - 1675454 - T 100 -12.2 -5.05782 | opp_overlap 1675454 1675456, overlap 1675456 ATTTAGGGTAAAAAA GACCGCTTGTTTGAGAGT GATT AGTCGCAAACAAGCGGGC TTTTTTGATTAAAAT TERM 2771 1675454 - 1675493 + T 100 -12.2 -5.27477 | opp_overlap 1675454 1675456, overlap 1675456 ATTTAGGGTAAAAAA GACCGCTTGTTTGAGAGT GATT AGTCGCAAACAAGCGGGC TTTTTTGATTAAAAT TERM 2772 1675491 - 1675456 - T 100 -13.4 -4.15748 | opp_overlap 1675454 1675456, overlap 1675454 TTAGGGTAAAAAAGA CCGCTTGTTTGAGAGT GATT AGTCGCAAACAAGCGG GCTTTTTTGATTAAA TERM 2773 1675456 - 1675491 + T 89 -13.4 -2.84518 | opp_overlap 1675456 1675454, overlap 1675454 TTAGGGTAAAAAAGA CCGCTTGTTTGAGAGT GATT AGTCGCAAACAAGCGG GCTTTTTTGATTAAA APL_1462 1675853 - 1675512 - | iron-sulfur cluster insertion protein ErpA APL_1463 1676054 - 1676845 + | putative ABC-transporter wzm 1676845 - 1677576 + | ABC transporter integral membrane subunit APL_1465 1677587 - 1678366 + | hypothetical protein TERM 2774 1679366 - 1679377 + G 71 -3 -5.07011 | CAAAAGATATCGCAT TAGA GCAT TCTA TTTTTAATTTATATA APL_1466 1679260 - 1679664 + | hypothetical protein rfbD 1679666 - 1680814 + | putative UDP-galactopyranose mutase TERM 2775 1680833 - 1680858 + F 100 -11.3 -5.06816 | opp_overlap 1680831 1680829 1680833 TCTTTAGAAAATAGA CCGCTTGTAAT AATT ATTATAAGCGG TTTTTATTGGAGAAT TERM 2776 1680858 - 1680833 - f 79 -9.1 -3.48115 | opp_overlap 1680833, overlap 1680831 1680829 TCTTTAGAAAATAGA CCGCTTGTAAT AATT ATTATAAGCGG TTTTTATTGGAGAAT APL_1468 1680877 - 1681446 + | hypothetical protein TERM 2777 1681538 - 1681591 + G 70 -2.5 -5.02074 | gap 1 GCAAGCTCAAAGTTA TCCACCTTCTCATATCGTCGTGGT TAATAAT ACCAGTAC-AGATGGGACGGTGGA TTTTTTACGGGATAA TERM 2778 1681939 - 1681953 + G 84 -6.4 -5.07652 | overlap 1681941 TTCCTGATATTGTGA TGCCGT TTA ACGGTA TTTTATTTTCGAGAA TERM 2779 1681941 - 1681951 + G 71 -6.8 -4.16397 | overlap 1681939 CCTGATATTGTGATG CCGT TTA ACGG TATTTTATTTTCGAG APL_1469 1681443 - 1682366 + | glycosyl transferase family protein APL_1470 1682372 - 1683145 + | hypothetical protein APL_1471 1683164 - 1684582 + | putative sugar transferase TERM 2780 1684592 - 1684612 + F 100 -10.5 -5.64304 | TATTAAAATGCAAGG GCGGAAAGA GTT TCTTTCTGC TTTTTTATTGTCTTG rfbB1 1684665 - 1685738 + | dTDP-glucose 4,6-dehydratase rpsU 1685959 - 1686174 + | 30S ribosomal protein S21 TERM 2781 1686201 - 1686240 + F 90 -10.8 -3.85698 | opp_overlap 1686203 1686209, overlap 1686203 1686209 TATTTAGCTTAAATT AACTAAAACCGTGAAACC TTTT GGAATCACGGTTTTAGTG TTTCTAGCGAACCAC TERM 2782 1686238 - 1686203 - f 100 -13.4 -3.53031 | opp_overlap 1686201 1686203 1686209, overlap 1686209 TTTAGCTTAAATTAA CTAAAACCGTGAAACC TTTT GGAATCACGGTTTTAG TGTTTCTAGCGAACC TERM 2783 1686203 - 1686238 + F 95 -13.4 -3.51934 | opp_overlap 1686203 1686209, overlap 1686201 1686209 TTTAGCTTAAATTAA CTAAAACCGTGAAACC TTTT GGAATCACGGTTTTAG TGTTTCTAGCGAACC TERM 2784 1686209 - 1686232 + F 76 -6.6 -4.53036 | opp_overlap 1686203 1686209, overlap 1686203 1686201 TTAAATTAACTAAAA CCGTGAAACC TTTT GGAATCACGG TTTTAGTGTTTCTAG TERM 2785 1686232 - 1686209 - f 76 -6.6 -4.5287 | opp_overlap 1686209 1686203 1686201, overlap 1686203 TTAAATTAACTAAAA CCGTGAAACC TTTT GGAATCACGG TTTTAGTGTTTCTAG TERM 2786 1686332 - 1686278 - f 72 -6.1 -4.36931 | gap 1, overlap 1686281 TAACCTATAGTAAAA TAAGCGGTCAAATTT-CAATAAATTT TGCA AAATTTAGCGTAAATCTAACCGCTTG CCGCTATGACAAGGA TERM 2787 1686329 - 1686281 - f 81 -7.8 -4.29302 | gap 1, overlap 1686278 CCTATAGTAAAATAA GCGGTCAAATTT-CAATAAATTT TGCA AAATTTAGCGTAAATCTAACCGC TTGCCGCTATGACAA TERM 2788 1687455 - 1687465 + G 73 -5.4 -4.7033 | TTGCAAAATGCGATG TCAC TCA GTGA TTTTCTATTCGATTC TERM 2789 1687693 - 1687679 - g 95 -5.6 -5.61596 | overlap 1687680 AGCCGTACAAAAAAA GGCGGT GCA AACGCC GCAAATTAAGCGAAC dnaG 1686354 - 1688096 + | DNA primase TERM 2790 1689201 - 1689191 - g 100 -8.2 -5.10029 | opp_overlap 1689191 ATTAATGCGAAAAAA GGCG CCG CGCC TAAATTGGCGAACTA TERM 2791 1689755 - 1689744 - g 70 -7.2 -3.76125 | CGATTTCAATGGAAA CGCC GATT GGCG ATGACGACGATTCGC rpoD 1688201 - 1690060 + | RNA polymerase sigma factor RpoD TERM 2792 1690115 - 1690063 - T 75 -8.7 -3.45849 | opp_overlap 1690077, overlap 1690065 1690067 1690077 CTTAGACGACTAGAA TAGAGAAATAAAAATGCCCAGGC GAGTTAA ACTTGGGCATTTTTATTTCTATG ACAAGCGGTCGAATT TERM 2793 1690113 - 1690065 - T 87 -11.3 -3.29987 | opp_overlap 1690077, overlap 1690063 1690067 1690077 TAGACGACTAGAATA GAGAAATAAAAATGCCCAGGC GAGTTAA ACTTGGGCATTTTTATTTCTA TGACAAGCGGTCGAA TERM 2794 1690111 - 1690067 - T 93 -13.9 -3.21036 | opp_overlap 1690077, overlap 1690065 1690063 1690077 GACGACTAGAATAGA GAAATAAAAATGCCCAGGC GAGTTAA ACTTGGGCATTTTTATTTC TATGACAAGCGGTCG TERM 2795 1690077 - 1690101 + T 83 -5 -5.42975 | opp_overlap 1690067 1690065 1690063 1690077 ATAGAGAAATAAAAA TGCCCAGG CGAGTTAAA CTTGGGCA TTTTTATTTCTATGA TERM 2796 1690101 - 1690077 - T 77 -3.5 -5.4433 | opp_overlap 1690077, overlap 1690067 1690065 1690063 ATAGAGAAATAAAAA TGCCCAGGC GAGTTAA ACTTGGGCA TTTTTATTTCTATGA TERM 2797 1690172 - 1690197 + T 74 -9.1 -3.07198 | opp_overlap 1690177, overlap 1690177 CTTGTCCAAAGCATA AAAAAGGAAGC CTAG GCTTCCTTTTC GTTTATATCTAAGAC TERM 2798 1690177 - 1690192 + T 93 -9 -4.66057 | opp_overlap 1690177, overlap 1690172 CCAAAGCATAAAAAA GGAAGC CTAG GCTTCC TTTTCGTTTATATCT TERM 2799 1690192 - 1690177 - T 95 -9 -5.42265 | opp_overlap 1690177 1690172 CCAAAGCATAAAAAA GGAAGC CTAG GCTTCC TTTTCGTTTATATCT tyrS 1691403 - 1690213 - | tyrosyl-tRNA synthetase TERM 2800 1690261 - 1690241 - G 71 -9.8 -2.64981 | overlap 1690238 1690237 ACACGGGCAAATTTA CGTTTACC GACTT GGTAAACG AACGTACCCTGTTGT TERM 2801 1691530 - 1691504 - R 100 -8.1 -5.92337 | ATAGACGAAAAAAAA CGCCTCATT TTGTGGGGG AATGAGGCG TAAGAGTTGGAGTGA APL_1477 1692212 - 1691748 - | hypothetical protein TERM 2802 1691891 - 1691905 + g 75 -3.4 -5.08255 | opp_overlap 1691884 1691885, overlap 1691884 CTTCAAAACGAGTGC CGCGGG CGT TCAGCG TTTTATTTTCAAGGT TERM 2803 1692253 - 1692234 - R 83 -6.5 -4.86033 | opp_overlap 1692234 1692232 AAATCCCGATAAAAA TAGCCTA AAAGAA TAGGCTA TATTAGTTTAAACGG TERM 2804 1692281 - 1692318 + r 81 -9.3 -3.7626 | CGGAGAATTTGGGAA GCGGTAGAATTTGTAAG AAGT TTTGCAAATTTGACCGC TTATTCGCTATTTCT vacB 1694683 - 1692326 - | ribonuclease R TERM 2805 1692820 - 1692834 + g 73 -10 -2.91772 | overlap 1692819 CTTCGTCCGCCCGAC GTTCGG CTG CCGAAC ATTTCTCGCCGAATT TERM 2806 1693928 - 1693944 + g 78 -5.1 -4.96501 | TTCTTCCGGCACTTC TTCGCTG AAT TGGCGAA TTTGTTTTTCTACGC TERM 2807 1694629 - 1694645 + g 70 -5.1 -4.43755 | overlap 1694625 TAAATTCTCTGCTCG GTACGGG ATT TTCGTAC TTTTCGCTTTCTTGT TERM 2808 1694703 - 1694750 + r 89 -12.2 -3.21258 | opp_overlap 1694708 TACTCTTTATATATG TTAAAGCGGTCTGATTTGCAGA AAAA TTTACAAATCAGACCGCTCGAA TTAAGTTAAGTTACT TERM 2809 1694745 - 1694708 - R 100 -16.5 -3.65425 | opp_overlap 1694703 TTTATATATGTTAAA GCGGTCTGATTTGCAGA AAAA TTTACAAATCAGACCGC TCGAATTAAGTTAAG APL_1479 1695266 - 1694751 - | thioredoxin-like protein APL_1480 1695898 - 1695266 - | DNA-binding transcriptional repressor FabR oxyR 1696784 - 1695891 - | DNA-binding transcriptional regulator OxyR APL_1482 1696909 - 1697643 + | hybrid peroxiredoxin HyPrx5 TERM 2810 1697683 - 1697721 + F 100 -12.6 -4.64766 | opp_overlap 1697684, overlap 1697684 AAAAGGTTGGTAAAA AGTGGGTTAAAGCCTTAT AGT ACAAGGCTTTAACCTACC TTTTTGAAATATGAA TERM 2811 1697684 - 1697720 + F 100 -16.1 -3.38378 | opp_overlap 1697684, overlap 1697683 AAAGGTTGGTAAAAA GTGGGTTAAAGCCTTAT AGT ACAAGGCTTTAACCTAC CTTTTTGAAATATGA TERM 2812 1697720 - 1697684 - f 100 -16.1 -4.58685 | opp_overlap 1697683 1697684 AAAGGTTGGTAAAAA GTGGGTTAAAGCCTTAT AGT ACAAGGCTTTAACCTAC CTTTTTGAAATATGA APL_1483 1698048 - 1698659 + | hypothetical protein TERM 2813 1698854 - 1698885 + T 88 -7.4 -4.91473 | opp_overlap 1698854 TTTCCCCATGATATA GCCATAATGGAC ATTTTTGA GTCTGTTATGGC TTTATTTTTAACTTC APL_1484 1699525 - 1698893 - | hypothetical protein TERM 2814 1699850 - 1699814 - R 100 -16.1 -4.84359 | opp_overlap 1699814 1699825 TCATTTTTATAAAAA GTGGGTTAAAGCCTTAT AGT ACAAGGTTTTAACCCAC TTTGTAGACTCAATT TERM 2815 1699814 - 1699850 + r 100 -16.1 -3.9009 | opp_overlap 1699814, overlap 1699825 TCATTTTTATAAAAA GTGGGTTAAAGCCTTAT AGT ACAAGGTTTTAACCCAC TTTGTAGACTCAATT TERM 2816 1699906 - 1699885 - R 93 -9.5 -4.63527 | opp_overlap 1699884 CCACTATCCCAAAAA CCGCTTATT TCAC AACAAGCGG CATGATTTTTAGGCT pdxY 1700789 - 1699929 - | pyridoxamine kinase TERM 2817 1701076 - 1701037 - R 100 -12.4 -5.24129 | opp_overlap 1701037 TTTGTGTATAAAAAA GCGATCAAATTTTCGCAA AAAA TCACAAAAATTTGACCGC GTGTTTTCTCTTTCG accA 1702046 - 1701093 - | acetyl-CoA carboxylase carboxyltransferase subunit alpha sufI 1703572 - 1702163 - | protein SufI precursor TERM 2818 1702470 - 1702452 - G 70 -6 -4.34402 | opp_overlap 1702458 1702467, overlap 1702456 TGTTTCACATTAAAA TCAATCCG TTT CGGATCAA AGCGTTTTTGATTAA TERM 2819 1703543 - 1703521 - G 73 -8.5 -3.63744 | gap 1, overlap 1703519 TCGGTGCGGAAAACA TCGTTGCGGC AACC GCCG-AACGA GTAAGTAATTGTCTT plsC 1704315 - 1703581 - | 1-acyl-sn-glycerol-3-phosphate acyltransferase TERM 2820 1704490 - 1704503 + G 76 -6.7 -4.57569 | AATGGGTAATCCGAT TACCG TTGC CGGTA TTTTTCCACAAGTGG TERM 2821 1704897 - 1704880 - g 72 -6.3 -4.29905 | gap 1, opp_overlap 1704880 1704879 ATTAGACGAAAATAA TCGC-GTG TTA CACAGCGA ATTGGTTTCCGAAAT tpx 1704458 - 1704958 + | putative thiol peroxidase TERM 2822 1705020 - 1705057 + F 87 -9.9 -4.00042 | opp_overlap 1705020 1705037 1705051 1705052 ATAGAACGACTACAA GCGGTCCGATTTGCAAA TTTT TTTGCAAAAACGACCGC TTCTTTAATAAGAAG TERM 2823 1705057 - 1705020 - f 81 -9.9 -3.49086 | opp_overlap 1705020, overlap 1705037 1705051 1705052 ATAGAACGACTACAA GCGGTCCGATTTGCAAA TTTT TTTGCAAAAACGACCGC TTCTTTAATAAGAAG trmE 1705081 - 1706439 + | tRNA modification GTPase TrmE TERM 2824 1706520 - 1706466 - T 100 -10.3 -5.47431 | gap 1, opp_overlap 1706469, overlap 1706469 TGAAGATATAAAAAA CAAGCGGTCAATTTC-TCAGGATTTT TGCA AAATTCCTATTGAAATTGACCGCTTT TTATAAGTTTTAAAG TERM 2825 1706517 - 1706469 - T 100 -12 -4.78477 | gap 1, opp_overlap 1706469, overlap 1706466 AGATATAAAAAACAA GCGGTCAATTTC-TCAGGATTTT TGCA AAATTCCTATTGAAATTGACCGC TTTTTATAAGTTTTA TERM 2826 1706469 - 1706517 + T 100 -9.8 -4.97402 | gap 1, opp_overlap 1706469 1706466 AGATATAAAAAACAA GCGGTCAATTTC-TCAGGATTTT TGCA AAATTCCTATTGAAATTGACCGC TTTTTATAAGTTTTA APL_1491 1707902 - 1706547 - | hypothetical protein TERM 2827 1707850 - 1707862 + g 95 -7.7 -5.04325 | CGCACGTCAAAGTTC TGGTC GGC GACCA TTTTTATCGTTTCAA APL_1492 1708187 - 1707915 - | hypothetical protein TERM 2828 1708282 - 1708263 - R 81 -10.8 -2.94099 | TTGTTTGACTAGACA TTGCGCAA ACGT TTGCGCAA ATTAAAATAAAAAAA TERM 2829 1708317 - 1708298 - R 100 -6.4 -6.11229 | opp_overlap 1708298 ATTAAAATAAAAAAA CCACGG CGTAAATT CCGTGG TTAATGTTTAAACTA APL_1493 1709014 - 1708325 - | hypothetical protein TERM 2830 1708568 - 1708556 - G 72 -7.7 -3.74347 | CTGATAAATTTTAAA CGAAC CTT GTTCG GCGGTCGGCGATAAA TERM 2831 1708622 - 1708642 + g 80 -6.1 -4.86621 | opp_overlap 1708632, overlap 1708624 1708625 GGCAAACTTATCTTG GCTGTAACG AGG CGTTACGTC TTTTTGATTCGGGAT TERM 2832 1708624 - 1708640 + g 72 -7.3 -4.05402 | opp_overlap 1708632, overlap 1708622 1708625 CAAACTTATCTTGGC TGTAACG AGG CGTTACG TCTTTTTGATTCGGG ftpA 1709330 - 1709899 + | fine tangled pili major subunit TERM 2833 1709927 - 1709975 + F 100 -11.9 -5.0133 | opp_overlap 1709928 1709931, overlap 1709928 1709931 TTGTATCCTTCTAAA ATAAGCGGTTGATTTCAATGCAA ATC TTGCAAAGAAATTGACCGCTTAA TTTTTTGGCAAAATG TERM 2834 1709974 - 1709928 - f 100 -11 -4.08767 | opp_overlap 1709927 1709928 1709931, overlap 1709931 TGTATCCTTCTAAAA TAAGCGGTTGATTTCAATGCAA ATC TTGCAAAGAAATTGACCGCTTA ATTTTTTGGCAAAAT TERM 2835 1709928 - 1709974 + F 100 -15.4 -3.60316 | opp_overlap 1709928 1709931, overlap 1709927 1709931 TGTATCCTTCTAAAA TAAGCGGTTGATTTCAATGCAA ATC TTGCAAAGAAATTGACCGCTTA ATTTTTTGGCAAAAT TERM 2836 1709971 - 1709931 - f 81 -8.3 -4.17316 | opp_overlap 1709928 1709927 1709931, overlap 1709928 ATCCTTCTAAAATAA GCGGTTGATTTCAATGCAA ATC TTGCAAAGAAATTGACCGC TTAATTTTTTGGCAA TERM 2837 1709931 - 1709971 + F 100 -12.7 -3.93166 | opp_overlap 1709931 1709928, overlap 1709928 1709927 ATCCTTCTAAAATAA GCGGTTGATTTCAATGCAA ATC TTGCAAAGAAATTGACCGC TTAATTTTTTGGCAA TERM 2838 1710002 - 1710035 + F 100 -9.1 -4.92783 | overlap 1710004 AATGCAAGTTATTTT TTTTGATTTTGCGAT CCAG ATCGCAAAATTAATA TTTTTCTCGTGCATT TERM 2839 1710004 - 1710033 + F 93 -11.7 -4.08042 | overlap 1710002 TGCAAGTTATTTTTT TTGATTTTGCGAT CCAG ATCGCAAAATTAA TATTTTTCTCGTGCA APL_1495 1710145 - 1710447 + | putative transcriptional regulator TERM 2840 1710759 - 1710746 - g 88 -6.7 -5.15167 | opp_overlap 1710745 CACCATCAATAAAAA TACCG AAGA CGGTA ATCTCGTTATCCTGA TERM 2841 1710991 - 1710978 - g 70 -3.9 -4.75404 | opp_overlap 1710978, overlap 1710980 AAATTCGAGGAAAAA TTTCT GAAA AGAAA TTTTCAGCGAGAAGT TERM 2842 1711260 - 1711287 + G 78 -10.6 -3.24823 | gap 1, overlap 1711257 1711256 CTGGAAATTGCGCGT GCGGTGGCGGCAT CCA GTGCCG-TACCGC TGATTTTTGCACCTT TERM 2843 1711832 - 1711856 + G 85 -7.1 -4.86731 | opp_overlap 1711833 1711836, overlap 1711836 AGGCGAATTGAAAAA AGACGTGCTGA ACA TCAGCACTTCC TTTTATTTGCCCGAA TERM 2844 1711855 - 1711833 - g 100 -10.6 -5.15969 | opp_overlap 1711832 1711836, overlap 1711836 GGCGAATTGAAAAAA GACGTGCTGA ACA TCAGCACTTC CTTTTATTTGCCCGA TERM 2845 1711836 - 1711852 + G 88 -10.9 -3.88331 | opp_overlap 1711833 1711836, overlap 1711832 GAATTGAAAAAAGAC GTGCTGA ACA TCAGCAC TTCCTTTTATTTGCC TERM 2846 1711852 - 1711836 - g 79 -10.9 -3.11448 | opp_overlap 1711836 1711832, overlap 1711833 GAATTGAAAAAAGAC GTGCTGA ACA TCAGCAC TTCCTTTTATTTGCC APL_1496 1710594 - 1711958 + | hypothetical protein TERM 2847 1712014 - 1711965 - T 87 -10.2 -3.79162 | opp_overlap 1711965, overlap 1711961 TTGAGATAAAAGGAA GCGGTCGAATTTAACGAATA TTTTGTCATT TTTTCGCTGAATTCGACCGC TTGTTTGAGTGTTAT TERM 2848 1711965 - 1712014 + T 93 -10.2 -4.01703 | opp_overlap 1711965 1711961 TTGAGATAAAAGGAA GCGGTCGAATTTAACGAATA TTTTGTCATT TTTTCGCTGAATTCGACCGC TTGTTTGAGTGTTAT APL_1497 1714200 - 1712026 - | putative integral membrane protein TERM 2849 1714258 - 1714209 - R 70 -8.1 -3.29471 | gap 1, opp_overlap 1714212 TTTTCATGATAGGAA GCGGTCGAATTCG-GCTAAATTTT TAC AAATTTTAAAGCAAATCCGACCGC TTGAACAAGAGCAAA TERM 2850 1714297 - 1714275 - R 100 -13.6 -4.49937 | TGAACAAGAGCAAAA CGAACGTTTA AGC TAAACGTTCG GCGAGATAGCCGTCA mgsA 1714740 - 1714282 - | methylglyoxal synthase TERM 2851 1714531 - 1714547 + g 72 -9.3 -3.16742 | GCCTAACTGTTGATC GCCGCCC ATC GGGCCGC TTAATAACGCTTGGA TERM 2852 1715280 - 1715298 + G 76 -6.7 -4.4715 | gap 1 CTCAGGCGACACCGG TGCG-GCG GTAG CGCACGCA TTTTATGGCTTAGAA thrC 1714873 - 1716153 + | threonine synthase APL_1500 1716239 - 1716748 + | hypothetical protein TERM 2853 1716917 - 1716935 + G 71 -2.4 -5.09225 | ACGGCTATCGTCGTA TTACGTTA AAG TTACGTGA TTTTTTGGGTGCGAT TERM 2854 1717563 - 1717531 - g 100 -12.1 -4.5852 | opp_overlap 1717531 CAAGTGAAATTAAAA GGACTCAGCCCTGTA CAA TACAGAACTCAGTCC TTAAATTAAACAGTC APL_1501 1716790 - 1717572 + | transposase TERM 2855 1717588 - 1717610 + T 89 -7 -5.2189 | overlap 1717590 ACAGTCTAACTTTTT GGGGTCAGAT CAA ATTTGACCGC TTTTTTACTACTTAC valS 1720495 - 1717631 - | valyl-tRNA synthetase TERM 2856 1718686 - 1718697 + g 74 -4.4 -5.01732 | CAAACTCTTTGCGAG TTGC TTTG GCAA TTTTTTCCGCAAGTT TERM 2857 1721205 - 1721189 - R 89 -13.7 -2.52543 | opp_overlap 1721186 ATTTTGTCTAACTTA CAGCCCC AGC GGGGCTG AACTATACTTAACCT TERM 2858 1721217 - 1721243 + r 100 -13 -3.89903 | opp_overlap 1721218, overlap 1721218 GCTGAACTATACTTA ACCTAGTACGGC TTT GCCGTGCTAGGA TTTATCGGCATATTT TERM 2859 1721218 - 1721242 + r 100 -16.5 -2.93219 | opp_overlap 1721218, overlap 1721217 CTGAACTATACTTAA CCTAGTACGGC TTT GCCGTGCTAGG ATTTATCGGCATATT TERM 2860 1721242 - 1721218 - R 95 -14.3 -3.16267 | opp_overlap 1721218 1721217 CTGAACTATACTTAA CCTAGTACGGC TTT GCCGTGCTAGG ATTTATCGGCATATT APL_1503 1721414 - 1721238 - | hypothetical protein TERM 2861 1721514 - 1721530 + r 93 -12.3 -3.48115 | overlap 1721486 1721512 1721510 AGCCTTCGGCTGAGT GAGCCAC TCT GTGGCTC TGTATTTTATCCAGC TERM 2862 1721547 - 1721567 + r 71 -7.5 -3.56727 | GTATTTTATCCAGCT TCCAGCCCT AGC GGGGCTGAA TTATGCTTAATTAAA APL_1504 1721996 - 1721574 - | putative acetyltransferase holC 1722434 - 1721997 - | DNA polymerase III subunit chi TERM 2863 1722509 - 1722524 + H 76 -2.6 -5.40474 | gap 1, overlap 1722511 AATTTGAAATGTAAG CG-GTAA GTT TTACTCG TTTTTTTGCAAAACT APL_1506 1722708 - 1723151 + | hypothetical protein TERM 2864 1723236 - 1723198 - f 95 -9 -5.10029 | opp_overlap 1723198 ATTAATTGCAAAAAA TCAGTAAGATTTAACCGC TTA ACGGCTAAATTTTGCTGA TTTTTTTAATTATTT TERM 2865 1723198 - 1723236 + F 100 -10.5 -5.73672 | opp_overlap 1723198 ATTAATTGCAAAAAA TCAGTAAGATTTAACCG CTTAA CGGCTAAATTTTGCTGA TTTTTTTAATTATTT tig 1723353 - 1724654 + | trigger factor TERM 2866 1724670 - 1724686 + F 83 -6.5 -4.87893 | opp_overlap 1724670 TTCTCAAACATAAAG CTCTCCG GTT TGGAGGG TTTTTAATTAGCATT APL_1508 1724787 - 1725236 + | putative rhodanese-related sulfurtransferase secB 1725261 - 1725761 + | preprotein translocase subunit SecB TERM 2867 1725772 - 1725790 + F 100 -11.8 -5.18371 | opp_overlap 1725776 ACTAATCTCTTTTAA GGTATGCA AAT TGCATACC TTTTCTTTTCTCCAC gpsA 1725946 - 1726956 + | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase cysE 1726968 - 1727783 + | serine acetyltransferase TERM 2868 1727835 - 1727810 - T 83 -10.5 -3.23975 | opp_overlap 1727810, overlap 1727808 1727807 ATCTCCTAAAAATCA TGCCGCTTGTT GTGA AATAAGCGGCA TTTTTTATTCGTTTA TERM 2869 1727810 - 1727835 + T 100 -12.7 -5.59655 | opp_overlap 1727810 1727808 1727807 ATCTCCTAAAAATCA TGCCGCTTGTT GTGA AATAAGCGGCA TTTTTTATTCGTTTA TERM 2870 1727934 - 1727915 - T 100 -10 -5.95286 | opp_overlap 1727910 1727915 ATCAAAAACAAAAAA GGCGTGTC TTTC AACACGCC TTCTCTTTTAGCATT TERM 2871 1727915 - 1727934 + T 85 -9.3 -3.97108 | opp_overlap 1727915, overlap 1727910 ATCAAAAACAAAAAA GGCGTGT CTTTCA ACACGCC TTCTCTTTTAGCATT tufB 1729163 - 1727979 - | elongation factor Tu coaA 1729917 - 1730867 + | pantothenate kinase TERM 2872 1731386 - 1731402 + G 78 -9.5 -3.72141 | overlap 1731383 GCGAATATTTACGAT CCTAAAG GCT CTTTAGG TTTAGATCTCGGTGT dsbE 1731002 - 1731544 + | thiol:disulfide interchange protein DsbE APL_1515 1731549 - 1732016 + | hypothetical protein APL_1516 1732016 - 1732930 + | cytochrome c biogenesis factor-like protein TERM 2873 1732982 - 1732957 - f 87 -13.3 -2.88788 | overlap 1732954 CGAACTAAAAACTGA TTCGGGCGGGT TTAT ACCCGCCCTAA AATTGCAAAAGGATA mogA 1733002 - 1733586 + | molybdenum cofactor biosynthesis protein glnB 1733706 - 1734044 + | nitrogen regulatory protein P-II lspA 1734123 - 1734605 + | lipoprotein signal peptidase ispH 1734606 - 1735550 + | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase APL_1521 1735550 - 1735798 + | hypothetical protein TERM 2874 1735810 - 1735856 + T 100 -19.8 -4.44461 | opp_overlap 1735814 1735834, overlap 1735804 1735811 TTAATTTACCCTCTT ACAAGCGGTTGTTTTTGGTAAA AAT TTTGCTAAAAACAACCGCTTGC TTTTCTACACTTATT TERM 2875 1735811 - 1735855 + T 100 -23.3 -3.25592 | opp_overlap 1735814 1735834, overlap 1735804 1735810 TAATTTACCCTCTTA CAAGCGGTTGTTTTTGGTAAA AAT TTTGCTAAAAACAACCGCTTG CTTTTCTACACTTAT TERM 2876 1735852 - 1735814 - T 95 -14.8 -3.29511 | opp_overlap 1735804 1735811 1735810, overlap 1735834 TTTACCCTCTTACAA GCGGTTGTTTTTGGTAAA AAT TTTGCTAAAAACAACCGC TTGCTTTTCTACACT APL_1522 1736466 - 1735867 - | hypothetical protein TERM 2877 1736060 - 1736081 + g 75 -2.1 -5.31275 | opp_overlap 1736049 TTTAGCGCACTTTCA CGCAGTAGG TTTT CCGCCTGTG TTTTTTCTCGTAACG TERM 2878 1736375 - 1736365 - G 86 -6.8 -5.03314 | GCGATCTGCAAAAAA CGGA TCG TCCG AAGGTCGGCGCAATA chuW 1738283 - 1736466 - | coproporphyrinogen III oxidase TERM 2879 1737199 - 1737187 - G 70 -7.7 -3.58269 | TAACCCAGTTCTAAA TCGTG TTG CACGA CACCAAGTAACGGCT TERM 2880 1738417 - 1738399 - R 100 -14.6 -5.252 | opp_overlap 1738399 TATCCTTATAAAAAA GCAGAGCG ATT CGCTCTGC TTTTTCGTTTACTGA TERM 2881 1738399 - 1738417 + r 100 -14.6 -5.01811 | opp_overlap 1738399 TATCCTTATAAAAAA GCAGAGCG ATT CGCTCTGC TTTTTCGTTTACTGA gst 1739057 - 1738440 - | glutathione S-transferase lysA 1740373 - 1739123 - | diaminopimelate decarboxylase TERM 2882 1739772 - 1739793 + g 71 -8.7 -3.28592 | opp_overlap 1739747 1739776, overlap 1739770 1739769 TCGGTTAATTGCGAA CCGATATGG CAAT CCATACCGG TAATTTTTACGTTCG TERM 2883 1740454 - 1740441 - R 82 -5.3 -5.28176 | TGTATTTACAAAAAA TCGAA TAAA TTCGA CCGCTTGTTATACGT TERM 2884 1740705 - 1740678 - R 76 -2.8 -5.54079 | gap 1, opp_overlap 1740678 TGAAAAAGTAAAAAA GCCGTTTCTCGTA TTT TA-AAGAAATGGC TTTGCAAGATTTCCT TERM 2885 1740768 - 1740751 - R 100 -9.1 -5.69473 | opp_overlap 1740751 TATACGACAAAAAAA GCCACCC TGAC GGATGGC TTTTATTCACGTTAT TERM 2886 1740751 - 1740768 + r 83 -6.9 -4.68705 | opp_overlap 1740751 TATACGACAAAAAAA GCCACCC TGAC GGATGGC TTTTATTCACGTTAT frdD 1741133 - 1740789 - | fumarate reductase subunit D frdC 1741538 - 1741146 - | fumarate reductase subunit C frdB 1742281 - 1741547 - | fumarate reductase iron-sulfur subunit frdA 1744093 - 1742294 - | fumarate reductase flavoprotein subunit TERM 2887 1744241 - 1744226 - H 73 -4 -5.05782 | opp_overlap 1744233 ATCTACCTCAAAAAA GGTAAA CCGG CTTACC GTCGTATTGATAATT TERM 2888 1744514 - 1744531 + G 71 -3.3 -5.03314 | opp_overlap 1744515, overlap 1744515 AAACGCAGCAAAATT ATGGCGG AAAT TCGCCAG TTTTTTAAAGATCGC TERM 2889 1744986 - 1744973 - g 70 -8.1 -3.61889 | overlap 1744966 1744964 1744965 GAAAAAGCCCGTAAA CACGG CTTC CCGTG TGAAGATGACGAGAA poxA 1744436 - 1745419 + | lysyl-tRNA synthetase TERM 2890 1745439 - 1745486 + T 100 -12.2 -4.18197 | opp_overlap 1745440 1745443, overlap 1745443 GATTAGCCATAAATA ACAAGCGGTCAAATTCTTGCAA AATT TTGCAGAAATTTGACCGCTTAC TTTTAGCTAAAAACT TERM 2891 1745485 - 1745440 - T 100 -17.9 -4.09519 | opp_overlap 1745439 1745443, overlap 1745443 ATTAGCCATAAATAA CAAGCGGTCAAATTCTTGCAA AATT TTGCAGAAATTTGACCGCTTA CTTTTAGCTAAAAAC TERM 2892 1745443 - 1745482 + T 100 -17.4 -3.69605 | opp_overlap 1745440 1745443, overlap 1745439 AGCCATAAATAACAA GCGGTCAAATTCTTGCAA AATT TTGCAGAAATTTGACCGC TTACTTTTAGCTAAA TERM 2893 1745482 - 1745443 - T 100 -17.4 -4.16305 | opp_overlap 1745443 1745439, overlap 1745440 AGCCATAAATAACAA GCGGTCAAATTCTTGCAA AATT TTGCAGAAATTTGACCGC TTACTTTTAGCTAAA dapF 1746325 - 1745501 - | diaminopimelate epimerase TERM 2894 1746456 - 1746472 + H 71 -3 -5.18357 | gap 1 TTCTGAAAAGGTTTT GCC-TCA AGTA TGATGGC TTTTTTGATGAATTA TERM 2895 1746535 - 1746549 + G 70 -7.2 -3.745 | TCTTTTGCAATTTGC CATAGT TTT ACTATG TATTTTAATCGGTGC TERM 2896 1747430 - 1747453 + G 72 -9.6 -3.1505 | overlap 1747452 GTAATCGCCATCTTC GGTATCGCAT GGTT AGGCGATACC TTAATGCAAGGTCAT dcuB 1746506 - 1747828 + | anaerobic C4-dicarboxylate transporter TERM 2897 1747889 - 1747850 - T 83 -7.3 -4.69053 | gap 1, opp_overlap 1747856 1747884, overlap 1747856 GATGATTTAAGAAAA TACAAATGCCCTC-CAAC GTTAA GTTGCGAGGGCATTTTTT TGCAAAAAATTTAGG TERM 2898 1747883 - 1747856 - T 100 -10.7 -4.56159 | gap 1, opp_overlap 1747856, overlap 1747850 TTAAGAAAATACAAA TGCCCTC-CAAC GTTAA GTTGCGAGGGCA TTTTTTTGCAAAAAA TERM 2899 1747856 - 1747883 + T 100 -10.7 -5.40072 | gap 1, opp_overlap 1747856 1747850 TTAAGAAAATACAAA TGCCCTC-CAAC GTTAA GTTGCGAGGGCA TTTTTTTGCAAAAAA crcB 1748271 - 1747900 - | camphor resistance-like protein CrcB TERM 2900 1748308 - 1748290 - R 73 -4.6 -4.94262 | TACACCAAAAACAAA TGAGGAAT TAA ATTCATCA CCACTACCGTCGCAA APL_1534 1749338 - 1748274 - | putative transport system permease protein TERM 2901 1750074 - 1750062 - g 77 -4.8 -4.91511 | ACGCTATGACAAAAA TGCC GAATG GGCA AAAACCGGAACACTG TERM 2902 1750096 - 1750079 - g 86 -7.7 -4.62471 | CCGAATGGGCAAAAA CCGGAAC ACTG ATTCCGG CATTGCTCGACAGTC TERM 2903 1750383 - 1750369 - g 72 -10 -2.83449 | overlap 1750378 AGATTTTCAGAATTA CTGCCA AAA TGGCAG GTGGCTACCACCGAT anmK 1749433 - 1750542 + | anhydro-N-acetylmuramic acid kinase murQ 1750596 - 1751510 + | N-acetylmuramic acid-6-phosphate etherase TERM 2904 1751522 - 1751560 + T 100 -17.6 -5.13741 | opp_overlap 1751522 CTAGGGCATAAAAAA GCGGTCGGATTTTGCAAA TTT TCTACAAAATCCGACCGC TTTTTATTACGTTAA TERM 2905 1751560 - 1751522 - T 100 -22 -5.26316 | opp_overlap 1751522 CTAGGGCATAAAAAA GCGGTCGGATTTTGCAAA TTT TCTACAAAATCCGACCGC TTTTTATTACGTTAA prmA 1752458 - 1751577 - | ribosomal protein L11 methyltransferase APL_1538 1753009 - 1752542 - | acetyltransferase APL_1539 1753273 - 1753013 - | hypothetical protein TERM 2906 1753386 - 1753363 - R 85 -6.8 -5.31275 | opp_overlap 1753363 CTTTAGTATAAAAAA CAGCAAGATT GTTG AATCTTACCG CCTTTATTTACCCTC tldD 1754854 - 1753394 - | TldD-like protein TERM 2907 1755532 - 1755543 + G 71 -3 -5.02074 | TAATCACGACAGCCA TTAC GACC GTAA TTTTTTACGCAATGA tilS 1754984 - 1756243 + | tRNA(Ile)-lysidine synthase TERM 2908 1756248 - 1756261 + T 79 -8.1 -4.00066 | opp_overlap 1756248 TATGCCATTAAAAAA CCTGC TTTC GCAGG TTTATAAATTATAAA TERM 2909 1756261 - 1756248 - T 90 -8.1 -5.15634 | opp_overlap 1756248 TATGCCATTAAAAAA CCTGC TTTC GCAGG TTTATAAATTATAAA xerD 1757455 - 1756562 - | site-specific tyrosine recombinase XerD TERM 2910 1757558 - 1757535 - R 100 -9.6 -4.6526 | opp_overlap 1757535 ACAAATGTGCAAAAA GCCGACTAGC ATAA ACTAATCGGC TTCTTAAATATGGCA TERM 2911 1757667 - 1757682 + r 77 -9 -3.61178 | opp_overlap 1757667 TCATATATAGATAAA GCGAGT AATA ACTCGC TTTCAGATAAGTGGC TERM 2912 1757682 - 1757667 - R 85 -9 -4.19483 | opp_overlap 1757667 TCATATATAGATAAA GCGAGT AATA ACTCGC TTTCAGATAAGTGGC TERM 2913 1758087 - 1758113 + r 74 -2.2 -5.57729 | AATTCGGTTTAAATT CGAAACAAGCCG TCA CTGATTTTTTCG TTTTTTGTCTTCTTT TERM 2914 1759791 - 1759805 + r 71 -5.7 -4.58213 | TGGTCTTCCGGCGAA CGAGT TTTTC ACTCG TTTTATCGTTACTTA TERM 2915 1760586 - 1760598 + r 72 -6.2 -4.31549 | AGGTTCTATTTCACT CCCC TCACC GGGG TTCTTTTCGCTTTTC TERM 2916 1761562 - 1761545 - R 74 -9.1 -3.07291 | opp_overlap 1761545 AAGGAGGTGATCCAA CCGCAGG TTCC CCTACGG TTACCTTGTTACGAC wecG 1764731 - 1764006 - | putative UDP-N-acetyl-D-mannosaminuronic acid transferase APL_1544 1766049 - 1764715 - | putative entero common antigen polymerase TERM 2917 1765427 - 1765411 - G 75 -5.1 -4.87626 | CCCTAATAGGAAAAA CAATAGC ACC GCCATCG ATAAATTCGCTCGTG TERM 2918 1765719 - 1765729 + g 84 -2.6 -5.63645 | TCAAATTTGCTTCTG TTTT TGC AAAA TTTTTTATATTTTCA wecF 1767119 - 1766049 - | 4-alpha-L-fucosyltransferase TERM 2919 1766352 - 1766366 + g 71 -5 -4.65895 | CAATAATTGTTGATA TTGGGT AAA ATCCAA TTTTTCCGTCAGCAC TERM 2920 1767190 - 1767176 - H 78 -7.8 -4.12133 | GGAAACATCAAACAA GCGGTC AAA AACCGC TAAAATCCTACCAAT TERM 2921 1767347 - 1767363 + H 85 -9.5 -4.0749 | opp_overlap 1767346 1767345 TTTAGCACATTAATT CCTACTA TTT TAGTAGG TTATTCATTTTTTAA hcp 1767397 - 1769052 + | hydroxylamine reductase TERM 2922 1769122 - 1769069 - f 70 -2 -5.26875 | gap 2, opp_overlap 1769081, overlap 1769071 1769081 CGGCTAATTAAAAAA GAGCGGTC-AAATTTC-GCAAAATTT TTGC AAATTTCTCAGCAATTTTGACCGCTT GTTGAATGTAGGGAC TERM 2923 1769728 - 1769705 - g 71 -8.2 -3.41581 | gap 1, opp_overlap 1769706 1769706, overlap 1769706 CAACTTAGTAATGAA CGCTTCGGTCG GGG CAACCGAAG-G CTTTGCAAGCGGTCG hcr 1769175 - 1770194 + | HCP oxidoreductase, NADH-dependent TERM 2924 1770207 - 1770239 + T 88 -7.1 -5.08824 | opp_overlap 1770213, overlap 1770208 1770213 TAAATTTTATAAACA AAAAAACCTCAAAGG AAA TCTTTGAGGTTTTAA TTTTTTAGGTAGCGA TERM 2925 1770208 - 1770238 + T 86 -10.6 -3.64812 | opp_overlap 1770213, overlap 1770207 1770213 AAATTTTATAAACAA AAAAACCTCAAAGG AAA TCTTTGAGGTTTTA ATTTTTTAGGTAGCG TERM 2926 1770213 - 1770233 + T 100 -10.5 -4.86862 | opp_overlap 1770213, overlap 1770208 1770207 TTATAAACAAAAAAA CCTCAAAGG AAA TCTTTGAGG TTTTAATTTTTTAGG TERM 2927 1770233 - 1770213 - T 100 -9.8 -6.02919 | opp_overlap 1770213 1770208 1770207 TTATAAACAAAAAAA CCTCAAAG GAAAT CTTTGAGG TTTTAATTTTTTAGG APL_1548 1771486 - 1770236 - | hypothetical protein TERM 2928 1770566 - 1770551 - G 73 -5.4 -4.65263 | ACGCTTTAAAACAAA TACCGA TAAA CCGGTA GCGATTGCAAGAATT TERM 2929 1770949 - 1770912 - G 70 -5.6 -4.30995 | GGTTTTAGAAAATAA CCGGCGGGTA-ACCAAGC TAAC GCC-GATATAGCCGCCGG CCCGATTAACGCCCC TERM 2930 1771211 - 1771195 - G 75 -2.2 -5.25799 | gap 1, overlap 1771196 1771198 AAAAGAAGATAAAAA CGACCGC CAGT ACGG-CG GAAAAGCTCAATACA TERM 2931 1771212 - 1771198 - G 74 -9.2 -3.40146 | overlap 1771195 1771196 AGAAGATAAAAACGA CCGCCA GTA CGGCGG AAAAGCTCAATACAA TERM 2932 1771325 - 1771312 - G 71 -4.5 -4.61231 | overlap 1771314 1771315 TCACACCGTGAAAAA TACCG CCGC CGGCA AATGCACCCAGCACG TERM 2933 1771454 - 1771467 + g 79 -8.1 -4.29396 | TGCGGTGGCGCTTGC CGTCC AAAC GGACG TTTTGCTCAATGATT wecE 1772619 - 1771474 - | TDP-4-oxo-6-deoxy-D-glucose transaminase wecD 1773249 - 1772626 - | TDP-fucosamine acetyltransferase TERM 2934 1773054 - 1773074 + g 91 -6.1 -5.52023 | overlap 1773057 TAATATCTTCAACCG TTGCCGCTT CGC AAGCGGTTA TTTTTTCTTGATAGT TERM 2935 1773057 - 1773071 + g 100 -10 -4.82661 | overlap 1773054 TATCTTCAACCGTTG CCGCTT CGC AAGCGG TTATTTTTTCTTGAT wecC 1774520 - 1773249 - | UDP-N-acetyl-D-mannosamine dehydrogenase TERM 2936 1774594 - 1774564 - R 100 -12.1 -5.4505 | gap 1 GTCCGTAACAAAAAA CAGGCTTTG-TCTT TTCC AAGAACAAAGCCTG CCGACTAATTCAATA wecB 1775678 - 1774599 - | UDP-N-acetylglucosamine 2-epimerase TERM 2937 1775729 - 1775742 + r 74 -2.3 -5.55664 | overlap 1775730 GGATTTTAATTTTGT TCGGC ATCT GCTGG TTTTTTTCGTAATAA APL_1553 1776597 - 1775719 - | hypothetical protein wecA 1777705 - 1776632 - | putative undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase TERM 2938 1776706 - 1776689 - G 74 -6.9 -4.28111 | CATACGACGAATAAA GCGTGTC ACTC GCCACGC ATGCGTAATCGAATA TERM 2939 1776896 - 1776912 + g 72 -6.5 -4.31329 | opp_overlap 1776895 GTGTAAGTGTAAACG GTCCGGT CTG AACGGAC TTTTGCCCTTTTTCA TERM 2940 1777609 - 1777629 + g 78 -5.5 -5.00616 | opp_overlap 1777607 1777608 GACGTTTACGAAAGT TCGGTTT ATCGACC AAACCGA TTTTTTCCGCAACCG TERM 2941 1778321 - 1778374 + G 71 -8.4 -3.53761 | gap 3, opp_overlap 1778328 1778355 ATTAGTCCCTTCTAT CGAATTAGTCCGTATGGTCAGC-TCGG GTA CCGAAGC-GACCATGTCGGC-AATTCG TTTAGCACGCGGTTA TERM 2942 1779182 - 1779194 + G 73 -9.1 -3.5394 | opp_overlap 1779171 ACAAGGCGTGTATCT TGCGC CAA GCGCA TTTGAAGCGGGCTTT hemL 1778004 - 1779284 + | glutamate-1-semialdehyde 2,1-aminomutase APL_1556 1780406 - 1779339 - | putative transport system permease protein TERM 2943 1779961 - 1779927 - G 71 -9.4 -3.04589 | overlap 1779926 GCAACACCAAATAAG CCATTCCGCTTTTTGA TAA TGAATAAACGGAATGG AAATTAACGGAGCGA mviN 1781955 - 1780426 - | virulence factor-like MviN TERM 2944 1781321 - 1781337 + g 73 -5.2 -4.67552 | TTCCACGCCCATTTC GGTTTA ACCAG TAAACC TTCTTTTTTCATAAA TERM 2945 1782333 - 1782350 + H 93 -7.1 -5.54079 | opp_overlap 1782333 CTATCGATAGCTAAA CATAAAC CAAC GTTTATG TTTTTTAATTTTTAC TERM 2946 1782350 - 1782333 - H 70 -7.1 -3.71873 | opp_overlap 1782333 CTATCGATAGCTAAA CATAAAC CAAC GTTTATG TTTTTTAATTTTTAC rpsT 1782389 - 1782652 + | 30S ribosomal protein S20 TERM 2947 1782663 - 1782698 + T 83 -10.6 -3.33473 | opp_overlap 1782670 1782673, overlap 1782664 1782673 CGTAATTGCTTTTTG TATAAAAGAACCGACC GAAG GGTCGGTTTTTTTACG TCTGTTTGCTCTATA TERM 2948 1782664 - 1782697 + T 84 -11.9 -2.59361 | opp_overlap 1782670 1782673, overlap 1782663 1782673 GTAATTGCTTTTTGT ATAAAAGAACCGACC GAAG GGTCGGTTTTTTTAC GTCTGTTTGCTCTAT TERM 2949 1782691 - 1782670 - T 89 -8.7 -4.36914 | opp_overlap 1782664 1782663 1782673, overlap 1782673 GCTTTTTGTATAAAA GAACCGACC GAAG GGTCGGTTT TTTTACGTCTGTTTG TERM 2950 1782673 - 1782688 + T 100 -10.4 -5.51402 | opp_overlap 1782670 1782673, overlap 1782664 1782663 TTTTGTATAAAAGAA CCGACC GAAG GGTCGG TTTTTTTACGTCTGT TERM 2951 1782688 - 1782673 - T 100 -10.4 -4.30995 | opp_overlap 1782673 1782664 1782663, overlap 1782670 TTTTGTATAAAAGAA CCGACC GAAG GGTCGG TTTTTTTACGTCTGT trkA 1784085 - 1782709 - | potassium transporter peripheral membrane component rsmB 1785433 - 1784135 - | ribosomal RNA small subunit methyltransferase B TERM 2952 1784959 - 1784974 + g 79 -3.2 -5.25805 | CATCGATAATTTCTC GCCAAT TCGG ATAGGC TTTTTTCAGTTTATT TERM 2953 1785080 - 1785066 - G 95 -7.8 -5.08824 | opp_overlap 1785066 1785067, overlap 1785067 TTTTCACGTAAAAAA CGGCGT AAC ACGCCA TTGATAAGTGCTTTA TERM 2954 1785079 - 1785067 - G 75 -9.1 -3.64812 | opp_overlap 1785066 1785067, overlap 1785066 TTTCACGTAAAAAAC GGCGT AAC ACGCC ATTGATAAGTGCTTT TERM 2955 1785399 - 1785415 + g 73 -10.1 -2.91398 | opp_overlap 1785398 ACTTGTAAAATAATT TGTGCGG CAA CCGCACG TGCGTTTTGTTTCTT selB 1787282 - 1785447 - | selenocysteine-specific elongation factor selA 1788664 - 1787279 - | selenocysteine synthase mioC 1788841 - 1789284 + | flavodoxin TERM 2956 1789328 - 1789303 - T 74 -5.5 -4.64861 | opp_overlap 1789303 TCCTTCCAAAACAAA GAGTTAGTAAC AATC ATTACTAGCTC TTTTTTTAACAAGCC TERM 2957 1789303 - 1789328 + T 93 -7 -5.40072 | opp_overlap 1789303 TCCTTCCAAAACAAA GAGTTAGTAA CAATCA TTACTAGCTC TTTTTTTAACAAGCC TERM 2958 1790073 - 1790109 + T 100 -13.9 -5.81032 | opp_overlap 1790074, overlap 1790074 CACCGTTCAGCAAAA AGGTCGGAATTTGTAAA AAA TTTGCAGATTCCGACCG TTTTTTTTACGCTTA TERM 2959 1790108 - 1790074 - T 100 -13 -4.7254 | opp_overlap 1790073 1790074 ACCGTTCAGCAAAAA GGTCGGAATTTGTAAA AAA TTTGCAGATTCCGACC GTTTTTTTTACGCTT TERM 2960 1790074 - 1790108 + T 100 -17.4 -4.06993 | opp_overlap 1790074, overlap 1790073 ACCGTTCAGCAAAAA GGTCGGAATTTGTAAA AAA TTTGCAGATTCCGACC GTTTTTTTTACGCTT lyx 1791579 - 1790122 - | putative L-xylulose kinase TERM 2961 1790880 - 1790864 - G 73 -5.7 -4.54205 | overlap 1790865 ACTACATCAAATAAA CCGCCGA CCA CCGGCGT TCCCACCGCTAATCC TERM 2962 1790879 - 1790865 - G 74 -9.2 -3.31438 | overlap 1790864 CTACATCAAATAAAC CGCCGA CCA CCGGCG TTCCCACCGCTAATC TERM 2963 1791303 - 1791288 - G 71 -4.6 -4.67608 | opp_overlap 1791288 1791289 1791296, overlap 1791289 GATCGGAAGACAAAA TCGCTC TGCC GAGCGG TTGGTTTTGCTGATC TERM 2964 1791599 - 1791615 + r 83 -6.5 -4.84017 | overlap 1791600 TTTCCCATAATTATG AGGACGA AGT TCGTCCG TTTTTGTAAAAAATT TERM 2965 1791600 - 1791614 + r 81 -10 -3.49687 | overlap 1791599 TTCCCATAATTATGA GGACGA AGT TCGTCC GTTTTTGTAAAAAAT APL_1565 1792037 - 1791594 - | putative gluconolactonase TERM 2966 1792381 - 1792360 - R 71 -6.7 -4.15657 | gap 1, overlap 1792363 CGACAATCAGATAAA GCACATAAAG AGG CTTTATG-GC GATTAAAAACCGAAA APL_1566 1792594 - 1792412 - | hypothetical protein tbpA 1795895 - 1793088 - | transferrin-binding protein 1 Tbp1 TERM 2967 1794356 - 1794367 + g 73 -5.8 -4.52589 | GATGTTTACCCAATC CCGT TTGT ACGG TTTTATCTAACGAGA tbpB 1797552 - 1795909 - | transferrin-binding protein TERM 2968 1796465 - 1796480 + g 79 -3.2 -5.36364 | GCTACCATTGTCTTA CCATTG ATAT CAACGG TTTTTCTATTTTTAA exbD 1797990 - 1797580 - | biopolymer transport ExbD protein exbB 1798658 - 1797990 - | biopolymer transport ExbB protein tonB1 1799420 - 1798680 - | periplasmic protein TERM 2969 1799682 - 1799644 - R 90 -11.2 -3.7347 | opp_overlap 1799648 1799652 1799675 CGTAAGATTCAATAA GCAGTCTGTTTTTGTAAA ATT TCCACAAAAACAGATCGC TTGAGCGTATTTGTT TERM 2970 1799733 - 1799717 - R 79 -3.7 -5.5074 | TAATCCAATAAAAAA TGCTAAT AAA ATTGGCA CGACTAAGTTGATGA APL_1572 1799944 - 1799696 - | hypothetical protein TERM 2971 1800053 - 1800073 + r 89 -11.1 -3.61764 | opp_overlap 1800046 AGCACAAACGTTGTC CCCCACACG AGC CATGTGGGG TTTACGCATTCCTCA TERM 2972 1800089 - 1800101 + r 73 -9.1 -2.83905 | TTTACGCATTCCTCA GAGGC TCC GCCTC TGTCCTAAATTATAG APL_1573 1800818 - 1800111 - | 2,3-diketo-L-gulonate reductase APL_1574 1801340 - 1801882 + | hypothetical protein TERM 2973 1801888 - 1801919 + T 81 -5.8 -5.00846 | opp_overlap 1801889, overlap 1801889 ATCAAACTAATAAAA AGAGCTGCCGATAA CGAT TTACCGACAGCTCG TTTTTATACTCTTTA TERM 2974 1801918 - 1801889 - T 100 -13.7 -5.24551 | opp_overlap 1801888 1801889 TCAAACTAATAAAAA GAGCTGCCGATAA CGAT TTACCGACAGCTC GTTTTTATACTCTTT TERM 2975 1801889 - 1801918 + T 80 -9.3 -3.58881 | opp_overlap 1801889, overlap 1801888 TCAAACTAATAAAAA GAGCTGCCGATAA CGAT TTACCGACAGCTC GTTTTTATACTCTTT APL_1575 1802508 - 1801954 - | hypothetical protein kpsF 1803461 - 1802526 - | arabinose-5-phosphate isomerase kdsB 1804231 - 1803473 - | 3-deoxy-manno-octulosonate cytidylyltransferase TERM 2976 1804268 - 1804248 - R 100 -11.2 -4.90296 | opp_overlap 1804247 1804246 AAAACCTCATAAAAA TCCCCTCT AATTA AGAGGGGA AGTATTTCTTATCTT kdsA 1805137 - 1804277 - | 2-dehydro-3-deoxyphosphooctonate aldolase cps5C 1806334 - 1805186 - | region 2 capsular polysaccharide biosynthesis protein TERM 2977 1805373 - 1805390 + g 73 -5.7 -4.56597 | TCAGTATTCATTATT TCTAAAA TTGC TTTTAGA TTTTTCGAAAAAACA cps5B 1807929 - 1806349 - | region 2 capsular polysaccharide biosynthesis protein TERM 2978 1807015 - 1807031 + g 71 -4.3 -4.77438 | GATATTATTTTTTTT CTCTTCC CAA GGGTGAG TTTTTAATACTACAT TERM 2979 1807151 - 1807170 + g 100 -8 -5.38549 | TCATTTATCACTTGT CCAATAAT AGTA ATTATTGG TTTTTGTTGTTTAAA TERM 2980 1807929 - 1807945 + r 86 -5.3 -5.626 | opp_overlap 1807927 1807932 GAATAGAAATGGACA TAATTAA CCC TTAATTA TTTTTTTATAAACTA APL_1581 1808897 - 1807932 - | putative glycosyltransferase TERM 2981 1809608 - 1809647 + G 78 -10.2 -3.25073 | gap 1, opp_overlap 1809618, overlap 1809618 TACCGGCGCAAATGG TTAACCA-AAACGGTACGG TTA CTGTGCCGTTTGTGGGTAA TATTCGTGTTGCAGG TERM 2982 1809618 - 1809636 + G 80 -8.8 -3.94811 | opp_overlap 1809618, overlap 1809608 AATGGTTAACCAAAA CGGTACGG TTA CTGTGCCG TTTGTGGGTAATATT cpxD 1809226 - 1810410 + | capsule polysaccharide export protein TERM 2983 1810745 - 1810704 - g 76 -10.3 -2.92026 | overlap 1810699 GAGCTCAAGATGATA CTTATACCGTACAAGAATA TATG CATTCTCGTACGGCACTAG AACAGTTAATGAAAG cpxC 1810436 - 1811593 + | capsule polysaccharide export inner-membrane protein cpxB 1811593 - 1812390 + | capsule polysaccharide export inner-membrane protein cpxA 1812387 - 1813037 + | ATP-binding protein TERM 2984 1813186 - 1813210 + T 73 -7.1 -4.06903 | overlap 1813187 TGACAAATCTCCCCT AACCCCTCTTT ACT AAAGAGGGGGA TTTCCTTTAAAGGTT TERM 2985 1813187 - 1813209 + T 80 -10.6 -3.03419 | overlap 1813186 GACAAATCTCCCCTA ACCCCTCTTT ACT AAAGAGGGGG ATTTCCTTTAAAGGT modF 1814857 - 1813385 - | putative molybdenum transport ATP-binding protein ModF TERM 2986 1814515 - 1814526 + g 85 -5.8 -5.09225 | TAGCCTCATATTCCT CGCA TAAT TGCG TTTTTTCGCTACCGT fmt 1815900 - 1814950 - | methionyl-tRNA formyltransferase TERM 2987 1816037 - 1816009 - R 100 -13.9 -3.59698 | GCAGGTTACATAGAA GATAGCGCCCGTC AAA GACAAGCGCCATC AAGGAAATATGTTCA APL_1588 1817013 - 1816063 - | TRAP transporter solute receptor APL_1589 1817075 - 1817803 + | hypothetical protein TERM 2988 1818181 - 1818197 + G 73 -5.1 -4.58395 | opp_overlap 1818184, overlap 1818184 GATCTGAATTTTAGC GAATCGA TTT TCGAATC TTTTTCCGGGCTGAC TERM 2989 1818247 - 1818265 + G 71 -3.1 -5.00884 | overlap 1818250 ATTACCGGTTTAGAC GATTTGC CGAAA GCAATTC TTTTTTACCGCCAAT trkH 1817884 - 1819362 + | Trk system potassium uptake protein TrkH TERM 2990 1819539 - 1819517 - g 70 -7.7 -3.68853 | overlap 1819509 CGAAAAATTGGCAAA CGCCGATCA AATTG TTATCGGCG CATCAATTCGTTACG APL_1591 1819377 - 1819904 + | hypothetical protein TERM 2991 1820338 - 1820320 - g 87 -5.2 -5.52347 | overlap 1820321 AACAAAATTAAAAAA CCGGCG GAAGCCG CACCGG CTGAACCGACAGCGG TERM 2992 1820332 - 1820321 - g 70 -7.2 -3.87748 | overlap 1820320 ACAAAATTAAAAAAC CGGC GGAA GCCG CACCGGCTGAACCGA mscL 1820008 - 1820397 + | large-conductance mechanosensitive channel TERM 2993 1820467 - 1820448 - T 100 -13.6 -4.78077 | opp_overlap 1820448 CCTAAGGAAAATAAA TGGCGAGC TTAT GCTCGCCA TTTTGCTATCAACTT TERM 2994 1820448 - 1820467 + T 100 -13.6 -4.35518 | opp_overlap 1820448 CCTAAGGAAAATAAA TGGCGAGC TTAT GCTCGCCA TTTTGCTATCAACTT TERM 2995 1820492 - 1820512 + T 81 -6.2 -4.88293 | opp_overlap 1820492 CAACTTATACGAAAA GAGAAAGC GGTCG GCTTTTTC TTTCTTTTTGCAATT lipA 1821519 - 1820527 - | lipoyl synthase TERM 2996 1821570 - 1821551 - R 100 -15 -3.6715 | CTATGCAATGTTAAA GGGCGGAG ATAA CTCCGCCC CGACACACAGATATT lipB 1822287 - 1821631 - | lipoyltransferase TERM 2997 1822220 - 1822238 + g 70 -6 -4.2461 | opp_overlap 1822220 CGATTATCGGTAAAA TCTTGCAT TTG ATGCCAGA TTTCTTCATAAGGCT APL_1595 1822618 - 1822319 - | hypothetical protein TERM 2998 1822653 - 1822697 + r 100 -16.7 -3.14693 | opp_overlap 1822656, overlap 1822656 TTATACTATTAAGAC TAAGCGGTATGATCTTGCAAG AAC TTTGCGAAATCATACCGCTTG TATATTACTCGTCCG TERM 2999 1822694 - 1822656 - R 100 -15.5 -3.40163 | opp_overlap 1822653 1822656 TACTATTAAGACTAA GCGGTATGATCTTGCAA GAACT TTGCGAAATCATACCGC TTGTATATTACTCGT TERM 3000 1822656 - 1822694 + r 100 -16.2 -3.71124 | opp_overlap 1822656, overlap 1822653 TACTATTAAGACTAA GCGGTATGATCTTGCAAG AAC TTTGCGAAATCATACCGC TTGTATATTACTCGT dacA 1823930 - 1822752 - | D-alanyl-D-alanine carboxypeptidase fraction A TERM 3001 1824005 - 1823981 - R 100 -13.7 -4.1958 | ATATAAAGCAAACAA GGGCTTGTTGA AAC TCAACAAACCC TGATGCGAGATATAA TERM 3002 1824045 - 1824058 + r 89 -6.7 -5.63517 | ATATCTTCTTCGCTC GCTAC AGAA GTAGC TTTTTTATTTAGCAC APL_1597 1824589 - 1824026 - | rare lipoprotein A RlpA-like protein mrdB 1825888 - 1824764 - | rod shape-determining protein mrdA 1827842 - 1825881 - | penicillin-binding protein 2 TERM 3003 1826476 - 1826489 + g 71 -2.3 -5.24129 | ACCGGAATCGTATCA CCTTG TACC CACGG TTTTTTATGACGGCG TERM 3004 1827749 - 1827794 + g 91 -8.2 -4.58685 | CAAGAAATGCGACCA GTGCACGACGGGCAAACAGA TTGCTC TCCGCTTGTCCGTCCCGCAC TTTTTCACGAGGTTT APL_1600 1828391 - 1827924 - | SPOUT methyltransferase superfamily protein APL_1601 1828728 - 1828414 - | hypothetical protein TERM 3005 1828859 - 1828811 - R 100 -10.6 -4.77778 | gap 1, opp_overlap 1828816, overlap 1828816 AACAAATAGACAAAA GTA-AAGCGGTCGTATTTGCAAA TTTT TTTACCAATACGACCGCTTGTAT TTAATCGGCTTAAAG TERM 3006 1828816 - 1828853 + r 100 -14.3 -3.86252 | opp_overlap 1828811 1828816 ATAGACAAAAGTAAA GCGGTCGTATTTGCAAA TTTT TTTACCAATACGACCGC TTGTATTTAATCGGC TERM 3007 1828853 - 1828816 - R 100 -16.5 -4.31065 | opp_overlap 1828816, overlap 1828811 ATAGACAAAAGTAAA GCGGTCGTATTTGCAAA TTTT TTTACCAATACGACCGC TTGTATTTAATCGGC TERM 3008 1828932 - 1828944 + r 74 -9.1 -2.98088 | CGCTAACTTATTCGA GCCAC GTT GTGGC TCTCTCCCTTTAAGC mutS 1831548 - 1828954 - | DNA mismatch repair protein TERM 3009 1830191 - 1830205 + g 79 -8.6 -4.14472 | CCGGTTGCTTCTCTT TCTCGA ATT TCGAGA TTTTCCAAATATTGC TERM 3010 1830566 - 1830586 + g 71 -3.3 -4.93595 | TGTTCTTTTTGCAAA GTGTCAA TTATATC TTGACGC TTTTTCAGTTTTTCT TERM 3011 1831709 - 1831655 - R 80 -6.6 -4.72127 | opp_overlap 1831663 1831673, overlap 1831660 GAATAATAAAAAGAA TGAAACAAGCGGTCTAAATTTGCAAA ATT TTTGCTAATTTAACCCGCTTATCAGA AGGTTTAATCCGCAC TERM 3012 1831704 - 1831660 - R 100 -13.1 -4.2711 | opp_overlap 1831663 1831673, overlap 1831655 ATAAAAAGAATGAAA CAAGCGGTCTAAATTTGCAAA ATT TTTGCTAATTTAACCCGCTTA TCAGAAGGTTTAATC TERM 3013 1831663 - 1831701 + r 83 -10.4 -3.30635 | opp_overlap 1831660 1831655, overlap 1831673 AAAAGAATGAAACAA GCGGTCTAAATTTGCAAA ATT TTTGCTAATTTAACCCGC TTATCAGAAGGTTTA APL_1603 1832463 - 1831714 - | putative amino-acid ABC transporter ATP-binding protein TERM 3014 1832292 - 1832258 - G 87 -8.6 -4.56597 | opp_overlap 1832259 1832260 1832262, overlap 1832259 1832260 TTTTTTGCCGAAAAA TCCACGCTTAACGGCT CTG AACCGTCAAACGTGAT TGTGCCTTGCTCCGG TERM 3015 1832291 - 1832259 - G 89 -12.1 -3.33744 | opp_overlap 1832259 1832260 1832262, overlap 1832258 1832260 TTTTTGCCGAAAAAT CCACGCTTAACGGCT CTG AACCGTCAAACGTGA TTGTGCCTTGCTCCG TERM 3016 1832290 - 1832260 - G 93 -13.4 -2.60032 | opp_overlap 1832259 1832260 1832262, overlap 1832259 1832258 TTTTGCCGAAAAATC CACGCTTAACGGCT CTG AACCGTCAAACGTG ATTGTGCCTTGCTCC APL_1604 1833168 - 1832485 - | amino acid ABC transporter permease TERM 3017 1832783 - 1832765 - G 71 -8.2 -3.48772 | AAGGTTTGCATATAA GTCATACC GAT GGTATAAC CGGCCTCCCATTGCC TERM 3018 1833282 - 1833333 + r 70 -4.6 -4.7629 | opp_overlap 1833286 1833289, overlap 1833286 1833289 AGACGGCTAAATAAA AAAATAAGCGGTAAAATTTACTAA ATTT TTGGTAAATTCTACCGCTTGTCGC TTTTTAAATTCCTAA TERM 3019 1833286 - 1833329 + r 93 -14.2 -2.86432 | opp_overlap 1833286 1833289, overlap 1833282 1833289 GGCTAAATAAAAAAA TAAGCGGTAAAATTTACTAA ATTT TTGGTAAATTCTACCGCTTG TCGCTTTTTAAATTC TERM 3020 1833329 - 1833286 - R 100 -12 -5.95539 | opp_overlap 1833286 1833282 1833289, overlap 1833289 GGCTAAATAAAAAAA TAAGCGGTAAAATTTACTAA ATTT TTGGTAAATTCTACCGCTTG TCGCTTTTTAAATTC TERM 3021 1833326 - 1833289 - R 100 -13.7 -5.01858 | opp_overlap 1833286 1833282 1833289, overlap 1833286 TAAATAAAAAAATAA GCGGTAAAATTTACTAA ATTT TTGGTAAATTCTACCGC TTGTCGCTTTTTAAA TERM 3022 1833289 - 1833326 + r 100 -13.7 -3.5616 | opp_overlap 1833289 1833286, overlap 1833286 1833282 TAAATAAAAAAATAA GCGGTAAAATTTACTAA ATTT TTGGTAAATTCTACCGC TTGTCGCTTTTTAAA APL_1605 1834648 - 1833350 - | hypothetical protein TERM 3023 1834121 - 1834139 + g 70 -6 -4.40173 | opp_overlap 1834105 1834118, overlap 1834118 TTTCGCATTTAAGTT TGCGAAAA CAT TTTCCGCA TTTTCACTTTCTACT TERM 3024 1834314 - 1834326 + g 74 -6.3 -4.42062 | overlap 1834306 CTCACTTCGATTTTA TGATC GTT GATCA TTTGTTTCGCCAGTG TERM 3025 1834455 - 1834435 - G 88 -12.5 -2.67244 | overlap 1834432 1834431 CCATAGTTAAACCGA CCGTACCCG TCC CGGGAACGG TTACCCCCATACCGT TERM 3026 1834738 - 1834724 - H 76 -4.2 -5.16237 | opp_overlap 1834725, overlap 1834725 1834726 AATTTTACTAAAAAA GCCGTA TTA TACGCC ACCGTTTAATCGGAT TERM 3027 1834799 - 1834813 + H 73 -4.2 -5.00138 | TTTAGCTAAAAATCG GCGG AAAATGA CCGC TTTTTGATTTAGGTC APL_1606 1834920 - 1835414 + | regulator of cell morphogenesis and NO signaling TERM 3028 1835477 - 1835422 - T 100 -17.4 -4.86621 | gap 1, opp_overlap 1835425 AGCCTTAAGCAAAAA CAAGCGGTTGATTTTGAAGAAAAATTT GCA AAATTCTTCCG-AAAATCAACCGCTTG TATCACACTCGCAAA TERM 3029 1835425 - 1835474 + T 75 -8.9 -3.49475 | gap 1, opp_overlap 1835422 CTTAAGCAAAAACAA GCGGTTGATTTTGAAGAAAAATTT GCA AAATTCTTCCG-AAAATCAACCGC TTGTATCACACTCGC APL_1607 1835822 - 1835493 - | putative drug resistance protein TERM 3030 1835610 - 1835598 - G 73 -9.1 -3.50832 | overlap 1835596 CCCGAAAGCGAAATA CGCCA CAA TGGCG GTTAGCACGATACCG TERM 3031 1835714 - 1835735 + g 70 -7.9 -3.737 | opp_overlap 1835714 1835710 1835707 1835715, overlap 1835715 1835734 TCACAAAAGCACCAA TCGCCACCG CTGT CGGTAGCGG TTTGCTAAAACCTTC TERM 3032 1835734 - 1835715 - G 80 -11.4 -2.63109 | opp_overlap 1835714 1835715, overlap 1835714 1835710 1835707 CACAAAAGCACCAAT CGCCACCG CTGT CGGTAGCG GTTTGCTAAAACCTT TERM 3033 1835715 - 1835734 + g 70 -9.2 -2.83899 | opp_overlap 1835715 1835714 1835710 1835707, overlap 1835714 CACAAAAGCACCAAT CGCCACCG CTGT CGGTAGCG GTTTGCTAAAACCTT TERM 3034 1835892 - 1835843 - R 100 -12.3 -5.07652 | opp_overlap 1835843 TCTCCGAAAACAAAA GCGGTTGGATTTTGCTCATTTTT TGCA AATTTTCAGCAAAATCCAACCGC TTTTCAAATTAATAA TERM 3035 1835843 - 1835892 + r 100 -12.3 -4.20696 | opp_overlap 1835843 TCTCCGAAAACAAAA GCGGTTGGATTTTGCTCATTTTT TGCA AATTTTCAGCAAAATCCAACCGC TTTTCAAATTAATAA APL_1608 1836200 - 1835910 - | hypothetical protein TERM 3036 1836303 - 1836332 + r 73 -9.3 -2.8793 | opp_overlap 1836303, overlap 1836302 TTTACAATAAAAAAA CGGTCGTAAATTC CGGT GAAAATACGACCG CTTATTGATATATAT TERM 3037 1836332 - 1836303 - R 100 -9.3 -5.88565 | opp_overlap 1836303 1836302 TTTACAATAAAAAAA CGGTCGTAAATTC CGGT GAAAATACGACCG CTTATTGATATATAT APL_1609 1836914 - 1836354 - | hypothetical protein TERM 3038 1837072 - 1837031 - R 85 -8.7 -4.21462 | opp_overlap 1837036 1837071, overlap 1837032 1837036 ACCTATCATTTAAAA CGCAAGCGGTCGTAAATTC CGAT GAAAATACGACCGCTTGTC TAACAACTTAGAATT TERM 3039 1837071 - 1837032 - R 85 -12.2 -3.12395 | opp_overlap 1837036, overlap 1837031 1837036 CCTATCATTTAAAAC GCAAGCGGTCGTAAATTC CGAT GAAAATACGACCGCTTGT CTAACAACTTAGAAT TERM 3040 1837067 - 1837036 - R 89 -11.6 -3.38281 | opp_overlap 1837036, overlap 1837032 1837031 TCATTTAAAACGCAA GCGGTCGTAAATTC CGAT GAAAATACGACCGC TTGTCTAACAACTTA TERM 3041 1837036 - 1837067 + r 89 -11.6 -3.494 | opp_overlap 1837036 1837032 1837031 TCATTTAAAACGCAA GCGGTCGTAAATTC CGAT GAAAATACGACCGC TTGTCTAACAACTTA APL_1610 1837380 - 1837087 - | hypothetical protein ureD 1838208 - 1837396 - | urease accessory protein UreD TERM 3042 1837750 - 1837764 + g 72 -10 -2.74144 | opp_overlap 1837750, overlap 1837749 CGCAAAATGACGGAA GGCGAA TCG TTCGCC GTTTAGCACTCGCCC TERM 3043 1837764 - 1837750 - G 74 -10 -3.19038 | opp_overlap 1837750 1837749 CGCAAAATGACGGAA GGCGAA TCG TTCGCC GTTTAGCACTCGCCC ureG 1839012 - 1838377 - | urease accessory protein UreG ureF 1839716 - 1839033 - | urease accessory protein UreF ureE 1840306 - 1839728 - | urease accessory protein UreE TERM 3044 1840313 - 1840333 + r 100 -15.5 -3.39895 | overlap 1840320 ATTTTTCATTATTTT CCTAGCACG AGC CGTGCTAGG TTCGTTAATCCAAGC TERM 3045 1840342 - 1840390 + r 93 -14 -3.05596 | opp_overlap 1840347, overlap 1840347 1840347 TGCTAGGTTCGTTAA TCCAAGCCACGTTGTGGCTT TTTTGTATT GAGCCACAACGTGGCTCTGA TTAGCTAACCGCATA TERM 3046 1840347 - 1840385 + r 100 -16.9 -2.92192 | opp_overlap 1840347, overlap 1840347 1840342 GGTTCGTTAATCCAA GCCACGTTGTGGCTT TTTTGTATT GAGCCACAACGTGGC TCTGATTAGCTAACC TERM 3047 1840347 - 1840359 + r 100 -9.1 -5.47159 | opp_overlap 1840347, overlap 1840342 1840347 GGTTCGTTAATCCAA GCCAC GTT GTGGC TTTTTTGTATTGAGC TERM 3048 1840385 - 1840347 - R 100 -16.2 -3.17075 | opp_overlap 1840347 1840347 1840342 GGTTCGTTAATCCAA GCCACGTTGTGGCT TTTTTGTATTG AGCCACAACGTGGC TCTGATTAGCTAACC TERM 3049 1840419 - 1840399 - R 100 -15.5 -3.09516 | opp_overlap 1840399 GCTCTGATTAGCTAA CCGCATACG GCT CGTATGCGG TATTACACGTGTGAT TERM 3050 1840399 - 1840419 + r 100 -15.5 -3.05521 | opp_overlap 1840399 GCTCTGATTAGCTAA CCGCATACG GCT CGTATGCGG TATTACACGTGTGAT gst 1841039 - 1840422 - | putative glutathione S-transferase TERM 3051 1841148 - 1841128 - R 93 -14.1 -2.90075 | TTCCCCCCAACTATA CCCCTCTTT TGT AAAGAGGGG CTGGGGAGATTTTGC ureC 1842881 - 1841163 - | urease subunit alpha ureB 1843197 - 1842892 - | urease subunit beta TERM 3052 1843357 - 1843379 + r 100 -10.5 -5.01422 | CGAAGAAAAATCTGT CCCTCTCCC ACAAG GGGCGAGGG TTTATTTTTATCTAA ureA 1843689 - 1843387 - | urease subunit gamma utp 1844576 - 1843761 - | urea transport protein ApUT TERM 3053 1843829 - 1843801 - G 70 -8.1 -3.64703 | opp_overlap 1843810, overlap 1843826 TTGTTTTTATCGAAA GCGGCTTTATCCA GCT TGGATTTAACCGC CAATAATAACCAACT TERM 3054 1844673 - 1844686 + r 70 -3.8 -4.88795 | TCCCGTGTGTTTGCA CCAC TATTTT GTGG TTTATTTTGTTAAAT cbiO 1845317 - 1844688 - | ABC transporter ATP-binding protein cbiQ 1845957 - 1845340 - | putative ABC transport permease protein CbiQ cbiM 1846572 - 1845964 - | cobalt transport protein CbiM cbiL 1847055 - 1846573 - | putative cytoplasmic membrane protein CbiL cbiK 1847741 - 1847055 - | putative periplasmic binding protein CbiK TERM 3055 1847236 - 1847246 + g 91 -8.2 -4.65153 | overlap 1847238 CTGCCGACTTTAATG CCGG AAA CCGG TTTTCCTTTATGTAA TERM 3056 1847287 - 1847270 - G 74 -6.3 -4.43681 | opp_overlap 1847270 1847284 TATGTAAGACTAAAA CGGATAA CGGC TTACCCG CTTCCGGTTTGGCTT TERM 3057 1847401 - 1847411 + g 100 -8.2 -4.78121 | TTGAGGCTTAATACG GCGC TAG GCGC TTCTTTTTTAGTTTT TERM 3058 1848024 - 1848007 - H 83 -11.3 -2.70994 | opp_overlap 1848007 1848018 1848019, overlap 1848006 1848019 TCAATTTTAGAGAAG CCGCCAA TCAA TTGGCGG TTTCTCCGCCGGTTA TERM 3059 1848007 - 1848024 + H 90 -11.3 -3.86822 | opp_overlap 1848007 1848006 1848019, overlap 1848018 1848019 TCAATTTTAGAGAAG CCGCCAA TCAA TTGGCGG TTTCTCCGCCGGTTA apuR 1848084 - 1848839 + | putative LysR-type transcriptional regulator TERM 3060 1848888 - 1848850 - T 100 -11.1 -5.64873 | opp_overlap 1848861 GCTAACAAGAAAAAA GCGGTCAAATTTTGCAA AAAAA TTGCAATCTCTGACCGC CAAGGTGAACACTGT APL_1626 1849379 - 1848918 - | hypothetical protein TERM 3061 1849543 - 1849592 + r 86 -10.2 -3.53091 | opp_overlap 1849543 1849544, overlap 1849544 TGTTTATCCGGAAAA TGGCAAGCGGTCGTTTTTAC AAAAAAATCG GTAAAAACAACCGCTTGCAG TTTAAAGAAGAGGAT TERM 3062 1849591 - 1849543 - R 100 -14.2 -4.11216 | gap 1, opp_overlap 1849543 1849544, overlap 1849544 TGTTTATCCGGAAAA TGGCAAGCGGTCGTTTTTACAAA AAAA TCGGTAAAAACAACCGCTTG-CA GTTTAAAGAAGAGGA TERM 3063 1849544 - 1849591 + r 83 -11.5 -2.71712 | opp_overlap 1849543 1849544, overlap 1849543 GTTTATCCGGAAAAT GGCAAGCGGTCGTTTTTAC AAAAAAATCG GTAAAAACAACCGCTTGCA GTTTAAAGAAGAGGA TERM 3064 1849591 - 1849544 - R 100 -15.8 -3.06515 | opp_overlap 1849544 1849543, overlap 1849543 GTTTATCCGGAAAAT GGCAAGCGGTCGTTTTTACAAA AAAA TCGGTAAAAACAACCGCTTGCA GTTTAAAGAAGAGGA APL_1627 1851472 - 1849607 - | hypothetical protein TERM 3065 1850938 - 1850918 - G 80 -2.5 -5.46698 | opp_overlap 1850918 GGTAAAACTAAAAAA GCCGAAT CCTTGAT AGTCGGC TTTAATCAGTTCCGA TERM 3066 1851543 - 1851528 - R 95 -9 -5.69473 | opp_overlap 1851528 TATATTATAAAAAAA GCCCTT TATA AAGGGC TTTCTACATTTAACT TERM 3067 1851528 - 1851543 + r 82 -9 -4.02534 | opp_overlap 1851528 TATATTATAAAAAAA GCCCTT TATA AAGGGC TTTCTACATTTAACT mtlR 1852057 - 1851533 - | mannitol repressor protein TERM 3068 1851910 - 1851930 + g 88 -9.8 -4.10161 | opp_overlap 1851903 ACAAGGAATCGACCA CCGACTTT AAAGC AAAGTCGG TTTTACGAAATACTC TERM 3069 1852015 - 1852001 - G 72 -7.1 -3.98804 | opp_overlap 1851993 TGAAAGTGCAAAGAA CCCTC GTAAA GAGGG AACTTCGCTTAATTG mtlD 1853196 - 1852057 - | mannitol-1-phosphate 5-dehydrogenase TERM 3070 1853275 - 1853256 - R 100 -13.6 -4.27316 | opp_overlap 1853254 GCTTGTAAGCGAAAA TCCCCCAC TTAC GTGGGGGA ACTTGAATTATTCGC mtlA 1855172 - 1853283 - | PTS system mannitol-specific EIICBA component TERM 3071 1855347 - 1855314 - R 93 -14.3 -3.09452 | opp_overlap 1855308 1855323, overlap 1855319 1855323 1855334 ATTTTTTAATAGACA TTTAATAAATGTGAT ATAG ATCACATTTATTAAA AATCCAATTTCATAA TERM 3072 1855342 - 1855319 - R 79 -9.8 -3.19255 | opp_overlap 1855308 1855323, overlap 1855314 1855323 1855334 TTAATAGACATTTAA TAAATGTGAT ATAG ATCACATTTA TTAAAAATCCAATTT TERM 3073 1855439 - 1855458 + r 100 -13.6 -3.68529 | opp_overlap 1855439 ATAAACATAAAAAAA GCCTCCGA ATAT TCGGAGGC TTTCGATAGTAAAAT TERM 3074 1855458 - 1855439 - R 100 -13.6 -5.90231 | opp_overlap 1855439 ATAAACATAAAAAAA GCCTCCGA ATAT TCGGAGGC TTTCGATAGTAAAAT glmS 1857312 - 1855480 - | D-fructose-6-phosphate amidotransferase TERM 3075 1857135 - 1857123 - G 80 -9.1 -4.07568 | opp_overlap 1857113 CTGTGCCGCCTAAAA GCGGT TTT ACCGC TAAAGCGTCGTCAAG APL_1632 1858194 - 1857436 - | sugar metabolism transcriptional regulator TERM 3076 1858000 - 1858010 + g 73 -5.4 -4.59773 | CGAATCATCTATCAT TTCC AAC GGAA TTTTTACCGCTCCGC TERM 3077 1858064 - 1858046 - G 93 -8.9 -4.46854 | opp_overlap 1858042 1858046 CGACGCAATAAGAAA CCGCTTT CTTCT AAAGCGG TTAAATCCTTACGAA TERM 3078 1858132 - 1858106 - G 79 -3.1 -5.41143 | gap 1, overlap 1858109 GAGGTTTCAAAAAAA TG-AGCTAACGT ATCT ACGCTAACTTCA CCTTCCTCTTGAACC TERM 3079 1858245 - 1858233 - R 72 -2.7 -5.22943 | overlap 1858225 ACCAAACTCAAAAAA TTTCG CTT CAAAA CTTTTTTATTATATT TERM 3080 1858302 - 1858319 + r 79 -9.9 -3.26947 | opp_overlap 1858302 TTAATAAAAAGAAAA GCCACTT AACT AAGTGGC TTCGTATCAAAATTA TERM 3081 1858319 - 1858302 - R 100 -9.9 -5.42605 | opp_overlap 1858302 TTAATAAAAAGAAAA GCCACTT AACT AAGTGGC TTCGTATCAAAATTA APL_1633 1858532 - 1858332 - | hypothetical protein APL_1634 1859623 - 1858631 - | putative glycosyltransferase APL_1635 1861534 - 1859672 - | putative adhesin processing HmwC-like protein APL_1636 1862881 - 1861550 - | hypothetical protein TERM 3082 1862944 - 1862923 - R 100 -8.1 -6.25578 | gap 1, overlap 1862925 ATCAAATAAAAAAAA GACCTACTGA GAA TCAGTAGG-C AAAGTGTGAATATTG TERM 3083 1862943 - 1862925 - R 100 -11.8 -4.74858 | overlap 1862923 CAAATAAAAAAAAGA CCTACTGA GAA TCAGTAGG CAAAGTGTGAATATT mtn 1863753 - 1863055 - | MTA/SAH nucleosidase TERM 3084 1863745 - 1863755 + g 70 -2.6 -5.00923 | GATAATACCAATTTT TAAT CTC ATTA TTTTGTTTCCTCTTT dsbA_2 1864460 - 1863753 - | thiol disulfide oxidoreductase TERM 3085 1864265 - 1864251 - G 73 -2.8 -5.13473 | ATCATATTTAAAAAA GTATTG GAT CAGTAC GCGCCCGTCCTTAGG slyX 1864748 - 1864527 - | hypothetical protein TERM 3086 1865020 - 1865010 - g 74 -4 -4.98255 | opp_overlap 1865010 GTTGAATCACAAAAA GAAA TTT TTTC TTATAACCAAGATAA TERM 3087 1865043 - 1865027 - g 74 -9.5 -3.29043 | overlap 1865038 AATTTTTTCTTATAA CCAAGAT AAA ATCTTGG CGGGTGTCCAAGATA TERM 3088 1865056 - 1865038 - g 74 -4.6 -4.74767 | overlap 1865027 ATAACCAAGATAAAA TCTTGG CGGGTGT CCAAGA TACCATCAAAAAAAC TERM 3089 1865086 - 1865071 - g 80 -2.5 -5.56568 | overlap 1865072 ATACCATCAAAAAAA CCGGT AAATTA ACCGA TGAAGATCTACAAAA TERM 3090 1865464 - 1865436 - g 78 -5.2 -5.055 | opp_overlap 1865457, overlap 1865452 CCAATGTTGAAAAAA GGCGGAAAAATG GAAAT CGTCGTTCCGCC TGAACTTGGTTACGG fkpA 1864839 - 1865570 + | putative FKBP-type peptidyl-prolyl cis-trans isomerase TERM 3091 1865621 - 1865584 - f 100 -17.3 -3.17571 | opp_overlap 1865571 1865584 1865620, overlap 1865571 AACCCTTGAATCCAA GCGGTCTAATTTGTAAA ATTT TTTGCAAATTAGACCGC TTTCTTTTTTGAAGG TERM 3092 1865584 - 1865621 + F 100 -19.5 -5.04249 | opp_overlap 1865571 1865584, overlap 1865571 1865620 AACCCTTGAATCCAA GCGGTCTAATTTGTAAA ATTT TTTGCAAATTAGACCGC TTTCTTTTTTGAAGG APL_1641 1865682 - 1866341 + | hypothetical protein tusD 1866341 - 1866718 + | hypothetical protein APL_1643 1866721 - 1867092 + | hypothetical protein APL_1644 1867105 - 1867374 + | hypothetical protein TERM 3093 1867441 - 1867410 - T 100 -10.3 -5.47159 | opp_overlap 1867414, overlap 1867414 CCGAATAAACAAAAA GAAACGGCTAGAA TTTTAC TTCTAGCCGTTTT TTCCATTTTAATCAA TERM 3094 1867437 - 1867414 - T 100 -11.1 -5.1502 | opp_overlap 1867414, overlap 1867410 ATAAACAAAAAGAAA CGGCTAGAA TTTTAC TTCTAGCCG TTTTTTCCATTTTAA TERM 3095 1867414 - 1867437 + T 100 -11.1 -5.2696 | opp_overlap 1867410 1867414 ATAAACAAAAAGAAA CGGCTAGAA TTTTAC TTCTAGCCG TTTTTTCCATTTTAA TERM 3096 1867575 - 1867550 - T 100 -10.5 -5.18355 | opp_overlap 1867550 GCTAAAAAGCAAAAA CCCCGTAGTTA TCGC TAACCACAGGG TTCCCTTCGCCTCTC TERM 3097 1867783 - 1867809 + T 74 -2.2 -5.57729 | TTTTCTTCTTAAATT CGAAACAAGCCG TCA CTGATTTTTTCG TTTTTTGTCTTCTTT TERM 3098 1869487 - 1869501 + T 71 -5.7 -4.58213 | TGGTCTTCCGGCGAA CGAGT TTTTC ACTCG TTTTATCGTTACTTA TERM 3099 1870282 - 1870294 + T 72 -6.2 -4.31549 | AGGTTCTATTTCACT CCCC TCACC GGGG TTCTTTTCGCTTTTC TERM 3100 1871260 - 1871272 + T 82 -7.7 -4.52347 | GACCCAAAAGGATGC CGGAT TAT ATCCG TTTTCGTCTTCTTTC TERM 3101 1871365 - 1871348 - T 74 -9.1 -3.07291 | opp_overlap 1871348 AAGGAGGTGATCCAA CCGCAGG TTCC CCTACGG TTACCTTGTTACGAC TERM 3102 1873335 - 1873315 - T 100 -14.1 -5.89659 | opp_overlap 1873315 ATAAAAAAAGAAAAA CCTCAGTGA AAT TCACTGAGG TTTTTTTAGATTAAC TERM 3103 1873315 - 1873335 + T 100 -14.1 -5.53288 | opp_overlap 1873315 ATAAAAAAAGAAAAA CCTCAGTGA AAT TCACTGAGG TTTTTTTAGATTAAC atpC 1873765 - 1873346 - | F0F1 ATP synthase subunit epsilon atpD 1875178 - 1873805 - | F0F1 ATP synthase subunit beta TERM 3104 1874963 - 1874973 + g 73 -8.2 -3.73411 | overlap 1874962 GACCGGTACTTGAAT CGGG TTA CCCG TATTTTCAACTTTTA TERM 3105 1875217 - 1875197 - R 91 -11.9 -3.72576 | opp_overlap 1875197 CTGTTCTCCATTAAA TTGCTGCGG CAC CCGCAACAA TTTCGTTTAATTCAT TERM 3106 1875197 - 1875217 + r 93 -9.7 -4.15201 | opp_overlap 1875197 CTGTTCTCCATTAAA TTGCTGCGG CAC CCGCAACAA TTTCGTTTAATTCAT atpG 1876058 - 1875192 - | F0F1 ATP synthase subunit gamma TERM 3107 1875240 - 1875254 + g 79 -7.8 -4.32177 | TAATTCATTTGTAAT GCTTGC TTG GCGAGC TTTGTTATACACTAA TERM 3108 1875777 - 1875753 - G 76 -9.5 -3.55444 | opp_overlap 1875753 1875757 TTTCCACGTTTTAAA TTCATTCAAAG TCG CTTTGAATAAA TTGATATTAAGGCCA TERM 3109 1875952 - 1875964 + g 76 -7.7 -4.11216 | GCAGCCATACGCTCT TGCGT TTT ACGCA TTTTAGAGGTAGCAA atpA 1877622 - 1876081 - | F0F1 ATP synthase subunit alpha atpH 1878168 - 1877635 - | F0F1 ATP synthase subunit delta TERM 3110 1877784 - 1877795 + g 78 -5.8 -4.82162 | CTAAGCGTTTTTCCA TCGC TTTT GCGA TTTTATCTTCTTGTG atpF 1878652 - 1878182 - | F0F1 ATP synthase subunit B atpE 1878966 - 1878712 - | F0F1 ATP synthase subunit C atpB 1879873 - 1879085 - | F0F1 ATP synthase subunit A APL_1653 1880281 - 1879898 - | F0F1 ATP synthase subunit I TERM 3111 1880045 - 1880000 - G 70 -7.2 -3.7744 | opp_overlap 1880011 1880015, overlap 1880009 1880014 AAGATAAGGCAATAA CTTAAAACACATAACCACTA ATAAAA TAGTGATTATCCATTTTAAG CCTTCGCCTCGATAA TERM 3112 1880577 - 1880605 + r 72 -2.5 -5.36441 | opp_overlap 1880578, overlap 1880578 1880581 AACAACTCAAAAAAA ATAAGTGTAAAGT GAT ACTTTTTACTTAA TTTTTTATCTCAAAG TERM 3113 1880604 - 1880578 - R 90 -3.8 -5.87688 | opp_overlap 1880577 1880578 1880581 ACAACTCAAAAAAAA TAAGTGTAAAGT GAT ACTTTTTACTTA ATTTTTTATCTCAAA gidB 1881259 - 1880642 - | glucose-inhibited division protein B TERM 3114 1881341 - 1881292 - R 90 -8.1 -4.84311 | opp_overlap 1881292 GTTTACACAATAAAA CACGGAATAAACCGAAAGTAA TCATTGTT TTAATTTCCGTATATTCCGTG TTTCCTAATCAGCTA TERM 3115 1881292 - 1881341 + r 75 -8.1 -3.79251 | opp_overlap 1881292 GTTTACACAATAAAA CACGGAATAAACCGAAAGTAA TCATTGTT TTAATTTCCGTATATTCCGTG TTTCCTAATCAGCTA gidA 1883251 - 1881359 - | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA TERM 3116 1883494 - 1883484 - H 73 -4 -5.19819 | AAATAAAATCAAAAA GTTA GCG TAAC TTAAAATCGATAAAG TERM 3117 1884296 - 1884308 + G 72 -6.3 -4.37092 | opp_overlap 1884287 1884296 1884295 AGCAAGCGACCAAAT CGAAT GCC ATTCG TTTTATGGAAACAAT APL_1656 1883701 - 1884513 + | hypothetical protein TERM 3118 1884551 - 1884525 - T 100 -10.2 -5.42265 | opp_overlap 1884528, overlap 1884528 CTAAATGATAAAAAA TAATGCCTCGCT GAT AACGAGGCATTT TATTTATTTCATTAT TERM 3119 1884528 - 1884548 + T 100 -9.7 -5.20222 | opp_overlap 1884525 1884528 AATGATAAAAAATAA TGCCTCGCT GAT AACGAGGCA TTTTATTTATTTCAT TERM 3120 1884548 - 1884528 - T 100 -11.9 -4.75967 | opp_overlap 1884528, overlap 1884525 AATGATAAAAAATAA TGCCTCGCT GAT AACGAGGCA TTTTATTTATTTCAT APL_1657 1885345 - 1884563 - | putative amino-acid ABC transporter-binding protein TERM 3121 1885504 - 1885547 + r 90 -12 -3.38314 | opp_overlap 1885507, overlap 1885507 1885514 TTTATGGGAATAGGA TAAGCGGTTATTTTTTCAAA ATTC TTTGCAAAATTAACCGCTTG TATTTGAGGATTAGG TERM 3122 1885507 - 1885544 + r 90 -11.5 -3.82603 | opp_overlap 1885507, overlap 1885504 1885514 ATGGGAATAGGATAA GCGGTTATTTTTTCAAA ATTC TTTGCAAAATTAACCGC TTGTATTTGAGGATT TERM 3123 1885544 - 1885507 - R 89 -11.5 -3.52341 | opp_overlap 1885507 1885504 1885514 ATGGGAATAGGATAA GCGGTTATTTTTTCAAA ATTC TTTGCAAAATTAACCGC TTGTATTTGAGGATT APL_1658 1886034 - 1885558 - | hypothetical protein APL_1659 1886414 - 1886037 - | hypothetical protein TERM 3124 1886352 - 1886364 + g 79 -3.4 -5.39721 | AAATAAGGCGGTAAC CAGT ATCGA ACTG TTTTTTATGTACTGC TERM 3125 1886483 - 1886457 - R 100 -13.1 -5.31275 | overlap 1886459 TTGTATTATAAAAAA TACCCCCTCTT GGATA AAGAGGGGGCA AACGAGTTAAAGAGG TERM 3126 1886481 - 1886459 - R 100 -13.5 -4.29153 | overlap 1886457 GTATTATAAAAAATA CCCCCTCTT GGATA AAGAGGGGG CAAACGAGTTAAAGA APL_1660 1887329 - 1886502 - | mannose permease IID component TERM 3127 1886998 - 1886987 - G 70 -5.8 -4.37092 | overlap 1886988 ATGTTCCCCAGAAAA TCGG ATCG CCGA CACCGGCAAGCGGCC APL_1661 1888134 - 1887340 - | mannose permease IIC component TERM 3128 1887839 - 1887864 + g 72 -6.1 -4.27117 | CCTGCCGCAGCCACC GGAATGGCGAT AGCG ATTGCCGTACC TTTATCTTGTCCGCC APL_1662 1889117 - 1888149 - | PTS system mannose-specific EIIAB component TERM 3129 1889022 - 1889038 + g 72 -7.3 -3.95073 | opp_overlap 1889016 1889022 CGGCACAAAGATAAC CGGATGA ACA TTATCCG TTTCTCCATATACCA TERM 3130 1889302 - 1889334 + r 100 -12.1 -4.5852 | opp_overlap 1889302 GACTGTTTAATTTAA GGACTGAGTTCTGTA TTG TACAGGGCTGAGTCC TTTTAATTTCACTTG APL_1663 1890105 - 1889293 - | transposase-like protein TERM 3131 1889948 - 1889930 - G 71 -2.4 -5.09225 | ATCGCACCCAAAAAA TCACGTAA CTT TAACGTAA TACGACGATAGCCGT APL_1664 1890626 - 1890117 - | transposase gntP_1 1892057 - 1890708 - | gluconate permease TERM 3132 1891735 - 1891724 - G 75 -5.8 -4.67982 | CGGCATCGAAGAAAA TCGG GAAG CCGA AGAGTAATGCCGCCA gntK 1892235 - 1892750 + | thermosensitive gluconokinase TERM 3133 1892772 - 1892810 + T 84 -6 -5.26316 | opp_overlap 1892772 TGTTGAGTAGAACAA GCGGTTATTTTCTGCAAA TTT TTTGCGAAATTTGACCGC TTTTTTATCGCCTAA gntR 1893820 - 1892822 - | HTH-type transcriptional regulator TERM 3134 1893278 - 1893268 - G 74 -4.6 -4.85782 | opp_overlap 1893275 TTGCCGAAAAATAAA CCAC TTG GCGG CAACCACGTTTGATC TERM 3135 1894130 - 1894118 - g 71 -4.1 -4.82998 | TGAAAGTAAAAGAAA CCAAT ACG ATCGG TATGTTAGTCACCAC TERM 3136 1894610 - 1894632 + G 73 -8.4 -3.63515 | opp_overlap 1894610 1894609 ATTTCGATTATCAAG CCGGTTTGGA ATG TGCAAGCCGG TTATTGGCACTAAAC rbsR 1893943 - 1894932 + | ribose operon repressor rbsD 1895053 - 1895472 + | D-ribose pyranase rbsA 1895485 - 1896966 + | D-ribose transporter ATP binding protein TERM 3137 1897053 - 1897067 + G 70 -7.2 -3.74526 | overlap 1897050 TAAAAAAATTCCTGA TAGAAC AAC GTTCTA TTATTGCATTACTCG rbsC 1897019 - 1897978 + | ribose ABC transporter permease protein TERM 3138 1898370 - 1898347 - g 71 -6.6 -4.15044 | opp_overlap 1898352, overlap 1898348 CGTGGTGCGAATAAA GGCGAAGTGG TGAG CCACATCGCT TCGGATAATGTTGCC TERM 3139 1898369 - 1898348 - g 74 -10.1 -3.08812 | opp_overlap 1898352, overlap 1898347 GTGGTGCGAATAAAG GCGAAGTGG TGAG CCACATCGC TTCGGATAATGTTGC rbsB 1898002 - 1898874 + | D-ribose transporter subunit RbsB rbsK 1898947 - 1899858 + | ribokinase TERM 3140 1899876 - 1899921 + F 100 -11.3 -6.01369 | opp_overlap 1899879 ATTTTATTGAATCAA TAAGCGGTTGGGTTTTTGCAG AAAT TTGCAATAATTCGACCGCTTG TTTTTTTATTATTTC TERM 3141 1902084 - 1902069 - g 77 -6.2 -4.70879 | opp_overlap 1902060 TGGAAATTGGAAAAA GATGAA GTGA TTCATC CGTTACCAATTCATA dmsA 1900092 - 1902509 + | anaerobic dimethyl sulfoxide reductase chain A precursor dmsB 1902519 - 1903136 + | anaerobic dimethyl sulfoxide reductase chain B dmsC 1903138 - 1903971 + | anaerobic dimethyl sulfoxide reductase chain C TERM 3142 1904006 - 1903979 - f 78 -7 -4.3208 | opp_overlap 1903984 1903985, overlap 1903981 1903985 CGGTATAACCTAAAA TATAATGGTGGG GAAA CCCACCGTTATG CGATAAATAAGGAAA TERM 3143 1904004 - 1903981 - f 83 -9.6 -3.76167 | opp_overlap 1903984 1903985, overlap 1903979 1903985 GTATAACCTAAAATA TAATGGTGGG GAAA CCCACCGTTA TGCGATAAATAAGGA TERM 3144 1903984 - 1904001 + F 77 -9.1 -3.33492 | opp_overlap 1903981 1903979 1903985, overlap 1903985 TAACCTAAAATATAA TGGTGGG GAAA CCCACCG TTATGCGATAAATAA TERM 3145 1903985 - 1904000 + F 78 -10.4 -2.59881 | opp_overlap 1903981 1903979 1903985, overlap 1903984 AACCTAAAATATAAT GGTGGG GAAA CCCACC GTTATGCGATAAATA TERM 3146 1904000 - 1903985 - f 80 -10.4 -2.98453 | opp_overlap 1903985 1903984, overlap 1903981 1903979 AACCTAAAATATAAT GGTGGG GAAA CCCACC GTTATGCGATAAATA TERM 3147 1904103 - 1904069 - g 84 -11.6 -3.07043 | TCTATCAGCGGAAGA TTATTAGGCTCGTTAT TCT ACTACGAGCCCAATAA TGAGAATGTACAGTC TERM 3148 1904536 - 1904526 - g 71 -6.8 -4.1552 | opp_overlap 1904526 TAGTCGCTCAACAAA CGGA TTT TCCG TTCTATAAAGGTTTA APL_1677 1904027 - 1904632 + | twin-argninine leader-binding protein DmsD TERM 3149 1905042 - 1905008 - g 70 -2.9 -4.99043 | gap 1 TGTTTACAAACAAAA GGACAACCTTGCGATA GTTG TATC-CGAAGCTGCCC TCAACAAGCGATTTC APL_1678 1904636 - 1905145 + | putative ferredoxin APL_1679 1905518 - 1905189 - | putative transcriptional regulator APL_1680 1906846 - 1905515 - | hypothetical protein TERM 3150 1907037 - 1906979 - R 74 -2 -5.5762 | gap 4, opp_overlap 1907023, overlap 1906981 1906985 1907004 AGGAAACACAAAAAA TACAGAGCCACAGCGTGGATCAACAGGCTC GAA GAGCCTCCTAA-CCACG-TACGGCT-TGT- GCGTGGTTATATCAC TERM 3151 1907036 - 1906981 - R 78 -7.1 -4.40478 | gap 3, opp_overlap 1907023, overlap 1906979 1906985 1907004 GAAACACAAAAAATA CAGAGCCACAGCGTGGATCAACAGGCTC GAA GAGCCTCCTAA-CCACG-TACGGCT-TG TGCGTGGTTATATCA TERM 3152 1907033 - 1906985 - R 75 -9 -3.42405 | gap 2, opp_overlap 1907023, overlap 1906981 1906979 1907004 CACAAAAAATACAGA GCCACAGCGTGGATCAACAGGCTC GAA GAGCCTCCTAA-CCACG-TACGGC TTGTGCGTGGTTATA TERM 3153 1907016 - 1907004 - R 74 -9.1 -3.1372 | overlap 1906985 1906981 1906979 CAGCGTGGATCAACA GGCTC GAA GAGCC TCCTAACCACGTACG TERM 3154 1907023 - 1907043 + r 81 -9.7 -3.48395 | opp_overlap 1906985 1906981 1906979 CGAAGAGCCTCCTAA CCACGTACG GCT TGTGCGTGG TTATATCACAGGGAT TERM 3155 1907128 - 1907073 - R 89 -9.4 -4.21812 | gap 1, opp_overlap 1907073, overlap 1907076 TTGCAGTGAAAATAA CAAGCGGTCAAA-TTCCTCTAATATTT TGT AAATGTTTAAGAAAATTTAACCGCTTG TTTCAATATTACGAT TERM 3156 1907164 - 1907140 - R 75 -10.1 -2.73875 | overlap 1907137 1907145 CTTGTTTCAATATTA CGATAGCACTC GAC GAGTACTATCA GGAGGTATTAAATCT APL_1681 1908869 - 1907178 - | hypothetical protein TERM 3157 1907814 - 1907826 + g 75 -2 -5.31456 | CTTTGTAATTGATTT TTCT AGCTC AGAA TTTTTTGTAACTTCA TERM 3158 1908054 - 1908079 + g 82 -8.3 -4.32951 | opp_overlap 1908042 ATACCAAAATAATTC TGGAGAATCCT GTAA GGGTTTCTCCA TTTCTTCATTGACAT purL 1912833 - 1908937 - | phosphoribosylformylglycinamidine synthase TERM 3159 1910860 - 1910841 - G 74 -10 -3.23216 | overlap 1910846 TCTGATCACGAGCAA CCATACCG GTTA CGGTACGG TCACCGATAGTGATT TERM 3160 1910956 - 1910972 + g 70 -5.1 -4.56775 | overlap 1910951 1910958 TTGTTGGCTATCAAG CGGTTGA TTT TCAACGG TTTTTGACGAAACGT TERM 3161 1912635 - 1912615 - G 74 -4 -5.02357 | gap 2 CACAATTAAACAAAA GCCGA-C-CG GTT CGTGTTCGGC AAGAGTCGGACCATA TERM 3162 1913713 - 1913731 + G 79 -8.2 -4.09117 | GTTCAAAATGGCGGA CTTATCCG AAG TGGATAAG TTATTTGTCAATCAA fucR 1913060 - 1913806 + | L-fucose operon activator TERM 3163 1913823 - 1913866 + F 84 -6.2 -5.32608 | opp_overlap 1913827 TGGTCTTTTTGCGAA TAAATGCCCGATTTTTTG CCTGTTTT TGCAAAATCGGGCATTTG TTTTTTGGCTTTTTT fucI 1914009 - 1915775 + | L-fucose isomerase TERM 3164 1915815 - 1915781 - f 91 -2.7 -6.04953 | opp_overlap 1915786 1915787 1915807 1915807, overlap 1915784 1915785 ATATAAATAAAAAAA TATCTTCCCTCTCCC TCTAC GGGAGAGGGGTTTTA CCCACTTTAGAACGG TERM 3165 1915786 - 1915810 + F 100 -13.6 -4.12942 | opp_overlap 1915784 1915785 1915781, overlap 1915787 1915807 1915807 AATAAAAAAATATCT TCCCTCTCCC TCTAC GGGAGAGGGG TTTTACCCACTTTAG TERM 3166 1915787 - 1915809 + F 95 -14.9 -3.07283 | opp_overlap 1915784 1915785 1915781, overlap 1915786 1915807 1915807 ATAAAAAAATATCTT CCCTCTCCC TCTAC GGGAGAGGG GTTTTACCCACTTTA TERM 3167 1916315 - 1916297 - g 74 -6.7 -4.40333 | TTGAAACAACATAAA CCTGAAC TTTAT GCTCAGG CGGACAGTTTCTTAT fucK 1915853 - 1917286 + | L-fuculokinase TERM 3168 1917784 - 1917773 - g 73 -7.2 -4.08945 | ACGATCGTGCGAAAA CCGC TTAT GCGG TCGTGATTACCGGCG fucU 1917421 - 1917855 + | fucose operon FucU protein TERM 3169 1918117 - 1918101 - g 83 -10.9 -3.46285 | GACGGTAAACACGAA GACGGTA AGT TACCGTC AAGCGAATGGCAATT fucA 1917906 - 1918556 + | L-fuculose phosphate aldolase fucP 1918611 - 1919900 + | L-fucose permease APL_1689 1920020 - 1921171 + | L-1,2-propanediol oxidoreductase TERM 3170 1921220 - 1921188 - f 76 -2.6 -5.47821 | opp_overlap 1921192, overlap 1921192 ACTCACCTAAAAAAA TCAACCGGTCAGGC GAATA ACTTGACCGGTTTT TTTATGTTAAGTAAT TERM 3171 1921216 - 1921192 - f 76 -7.8 -4.04789 | opp_overlap 1921192, overlap 1921188 ACCTAAAAAAATCAA CCGGTCAGGC GAATA ACTTGACCGG TTTTTTTATGTTAAG TERM 3172 1921192 - 1921216 + F 100 -9.3 -5.80817 | opp_overlap 1921192 1921188 ACCTAAAAAAATCAA CCGGTCAGG CGAATAA CTTGACCGG TTTTTTTATGTTAAG TERM 3173 1921329 - 1921345 + F 87 -2.4 -6.01725 | opp_overlap 1921329 TATTTCAAAAAACCA TAAAAA ACTTG TTTTTA TTTTTTCTTTTTATT APL_1690 1921375 - 1922016 + | inner membrane protein TERM 3174 1922060 - 1922039 - f 93 -10.1 -4.2237 | opp_overlap 1922041, overlap 1922041 AAATTAACTTTAAAA GAGCCGCCT TATT AGGCGGCTT TTTTGATCGTAACAA TERM 3175 1922041 - 1922058 + F 100 -12.7 -5.1861 | opp_overlap 1922039 1922041 ATTAACTTTAAAAGA GCCGCCT TATT AGGCGGC TTTTTTGATCGTAAC TERM 3176 1922058 - 1922041 - f 95 -12.7 -3.70019 | opp_overlap 1922041, overlap 1922039 ATTAACTTTAAAAGA GCCGCCT TATT AGGCGGC TTTTTTGATCGTAAC APL_1691 1922228 - 1922887 + | putative ABC transporter, permease protein, amino acid APL_1692 1922877 - 1923545 + | putative ABC transporter, permease protein, amino acid TERM 3177 1923602 - 1923582 - g 84 -5.4 -5.38951 | overlap 1923584 AATTTACATAAAAAA TATGGCGA AACGG TCGCCATT CCCAATTTGGATTTG TERM 3178 1923600 - 1923584 - g 79 -8 -4.31943 | overlap 1923582 TTTACATAAAAAATA TGGCGA AACGG TCGCCA TTCCCAATTTGGATT TERM 3179 1923726 - 1923711 - g 71 -3.2 -5.06414 | GGCTTGGAAGAAAAA CAAGGC GGCA GCATTG TGATGCAAGATGTCG APL_1693 1923546 - 1924277 + | putative amino-acid ABC transporter ATP-binding protein APL_1694 1924338 - 1925174 + | antigenic protein, ABC transporter-like protein TERM 3180 1925192 - 1925229 + F 100 -13.7 -3.72989 | opp_overlap 1925197, overlap 1925197 ATTTGAGTTATATCT AAAAAGCGCAAAGAAAT CATG GTTTCTTTGCGCTTTTC TTTGGCTCTAAATTT TERM 3181 1925224 - 1925197 - f 100 -12.9 -4.71061 | opp_overlap 1925192 1925197 AGTTATATCTAAAAA GCGCAAAGAAA TCATGG TTTCTTTGCGC TTTTCTTTGGCTCTA TERM 3182 1925197 - 1925224 + F 100 -13.6 -4.92385 | opp_overlap 1925197, overlap 1925192 AGTTATATCTAAAAA GCGCAAAGAAAT CATG GTTTCTTTGCGC TTTTCTTTGGCTCTA TERM 3183 1925948 - 1925937 - g 90 -4.4 -5.64421 | AGCGGAAAGAAAAAA GGTT ATTT AACC GATTTACATCGTTAC kpsC 1925307 - 1927376 + | capsule polysaccharide modification protein LipA TERM 3184 1927543 - 1927517 - g 88 -6.7 -5.10933 | GTACTCAAAATAAAA CGGTATTTAAA ATCAA TTTAAATGCCG GTGATGAATATTTTT TERM 3185 1928673 - 1928635 - g 100 -14.2 -3.96842 | opp_overlap 1928635 1928636, overlap 1928636 ACCTTAACACAACAA CCGGTTATTTTTTGTAAA ATC TTCACAAAAAATAACCGC TTTTCTAATCTATTC TERM 3186 1928635 - 1928673 + G 100 -12 -4.5477 | opp_overlap 1928635 1928636, overlap 1928636 ACCTTAACACAACAA CCGGTTATTTTTTGTAAA ATC TTCACAAAAAATAACCGC TTTTCTAATCTATTC TERM 3187 1928672 - 1928636 - g 100 -17.7 -2.97382 | opp_overlap 1928635 1928636, overlap 1928635 CCTTAACACAACAAC CGGTTATTTTTTGTAAA ATC TTCACAAAAAATAACCG CTTTTCTAATCTATT TERM 3188 1928636 - 1928672 + G 100 -15.5 -3.31777 | opp_overlap 1928636 1928635, overlap 1928635 CCTTAACACAACAAC CGGTTATTTTTTGTAAA ATC TTCACAAAAAATAACCG CTTTTCTAATCTATT hcsB 1927399 - 1928715 + | capsule polysaccharide modification protein HcsB APL_1697 1929798 - 1928704 - | hypothetical protein TERM 3189 1929741 - 1929790 + g 100 -12.5 -4.56597 | gap 1, opp_overlap 1929748, overlap 1929745 1929748 TTTCGGCGGTAATCA TAAGAAAGCGGTCGATTTGCAAGA ATT TTTTACAAATCGACCGCTTG-TTA TTTTTCAAAAGAGAA TERM 3190 1929745 - 1929787 + g 100 -15.8 -4.40561 | opp_overlap 1929748, overlap 1929741 1929748 GGCGGTAATCATAAG AAAGCGGTCGATTTGCAAGA ATT TTTTACAAATCGACCGCTTG TTATTTTTCAAAAGA TERM 3191 1929748 - 1929784 + g 100 -17.5 -4.31587 | opp_overlap 1929748, overlap 1929745 1929741 GGTAATCATAAGAAA GCGGTCGATTTGCAAGA ATT TTTTACAAATCGACCGC TTGTTATTTTTCAAA TERM 3192 1929784 - 1929748 - G 100 -17.5 -4.3953 | opp_overlap 1929748 1929745 1929741 GGTAATCATAAGAAA GCGGTCGATTTGCAAGA ATT TTTTACAAATCGACCGC TTGTTATTTTTCAAA ulaD 1930491 - 1929811 - | 3-keto-L-gulonate-6-phosphate decarboxylase TERM 3193 1930286 - 1930298 + g 79 -6.9 -4.66609 | opp_overlap 1930282, overlap 1930284 TTGGCTAAAATCGCA CCGCC GTC GGTGG TTTTTAAGTCGCATA TERM 3194 1930526 - 1930560 + r 73 -7.9 -3.86346 | TTGTTAAATCGTTCT TTATTCCTCTCTCGC AAGCA GAGAGAGAGGGAGAA TTTCTAACCGGCTAA ulaC 1931031 - 1930564 - | ascorbate-specific phosphotransferase protein IIA component TERM 3195 1931101 - 1931080 - R 100 -10.1 -4.46233 | overlap 1931081 TTAATCGGAAATAAA CCCGCCTCC GTTA AGAGGCGGA TGTCAGATTATTGAT TERM 3196 1931100 - 1931081 - R 87 -11.4 -3.27017 | overlap 1931080 TAATCGGAAATAAAC CCGCCTCC GTTA AGAGGCGG ATGTCAGATTATTGA ulaA 1932914 - 1931109 - | ascorbate-specific PTS system enzyme IIC/IIB TERM 3197 1933076 - 1933091 + H 74 -3.3 -5.36689 | TTATTTTTGATTATT TGTGA GCAAGA TCACA TTTTATTTTTCATTT TERM 3198 1933101 - 1933112 + H 71 -3 -5.13344 | ATCACATTTTATTTT TCAT TTAT ATGA TTTTTATGTTCATAT ulaG 1933388 - 1934479 + | putative L-ascorbate 6-phosphate lactonase TERM 3199 1934487 - 1934521 + F 86 -8 -4.77896 | overlap 1934490 TGCTTTAATTGAAGG CGAGCCACTCTTAA CGGAATT TTAAGAGTGGCTTA TTTTTCAGTTCATTG TERM 3200 1934490 - 1934518 + F 100 -11.9 -4.47888 | overlap 1934487 TTTAATTGAAGGCGA GCCACTCTTAA CGGAATT TTAAGAGTGGC TTATTTTTCAGTTCA TERM 3201 1934824 - 1934812 - g 71 -4.7 -4.73388 | opp_overlap 1934813, overlap 1934813 AATTTCGATGAAAAA CGTCG TAT CGCCG AGGCGGCGAGCAGAC ulaR 1934581 - 1935327 + | transcriptional repressor UlaR APL_1703 1935413 - 1936273 + | putative L-xylulose 5-phosphate 3-epimerase araD 1936300 - 1936980 + | L-ribulose-5-phosphate 4-epimerase TERM 3202 1937005 - 1937042 + T 100 -12.1 -5.25803 | opp_overlap 1937015 ATGTTGTGTGTGCAA GCGGTCAAAATTGCAGA ATTT TTTGCAAATTCGACCGC TTTTTTATCGAACTT TERM 3203 1937108 - 1937091 - T 100 -12.7 -5.24129 | TCCGGCGATAAAAAA GCCTCCG AATA CGGAGGC TAGATAGATGGTTTG APL_1705 1937761 - 1937132 - | FKBP-type peptidyl-prolyl cis-trans isomerase TERM 3204 1938243 - 1938262 + G 79 -8.6 -4.18018 | GAGCCGGAAATGTCG CACGTAGC CTCG GTTACGTG TTTTACGTCACAGCC APL_1706 1938143 - 1938826 + | hypothetical protein TERM 3205 1938933 - 1938906 - f 89 -8.5 -4.58424 | opp_overlap 1938906 TATCATTATAGAAAA GCCCTTACTTA TATAAC TAAGTAGGGGC TTTATATGAGAATTC TERM 3206 1938906 - 1938933 + F 93 -10.7 -4.0492 | opp_overlap 1938906 TATCATTATAGAAAA GCCCTTACTTA TATAAC TAAGTAGGGGC TTTATATGAGAATTC APL_1707 1939172 - 1939606 + | hypothetical protein TERM 3207 1939616 - 1939604 - f 80 -4.9 -5.37593 | opp_overlap 1939604, overlap 1939596 GGTGAAATCAAAAAA TAGTT TTT AACTA TTTCATATAATGGTA TERM 3208 1939630 - 1939653 + F 77 -9 -3.61536 | gap 1, overlap 1939631 1939632 1939649 TATTTCATATAATGG TA-GGACACAC GGC GTGTGTCCGTA TTTGACGGTTGAATT TERM 3209 1939631 - 1939651 + F 81 -9.7 -3.38314 | overlap 1939630 1939632 1939649 ATTTCATATAATGGT AGGACACAC GGC GTGTGTCCG TATTTGACGGTTGAA TERM 3210 1939632 - 1939650 + F 87 -13.2 -2.62667 | overlap 1939631 1939630 1939649 TTTCATATAATGGTA GGACACAC GGC GTGTGTCC GTATTTGACGGTTGA APL_1708 1939752 - 1940381 + | hypothetical protein APL_1709 1940493 - 1941149 + | hypothetical protein TERM 3211 1941157 - 1941194 + T 82 -10.1 -3.63694 | opp_overlap 1941157 ATTGGTAGTTTACAA GCGGTTGTTTTTG GTAAGAAAACCG CAAAAACAACCGC TTGTTAGGAATGAAT TERM 3212 1941194 - 1941157 - T 79 -10.1 -3.32963 | opp_overlap 1941157 ATTGGTAGTTTACAA GCGGTTGTTTTTG GTAAGAAAACCG CAAAAACAACCGC TTGTTAGGAATGAAT rfaD 1942135 - 1941209 - | ADP-L-glycero-D-mannoheptose-6-epimerase TERM 3213 1942241 - 1942256 + r 77 -6.1 -4.72497 | opp_overlap 1942241, overlap 1942236 GTAAACAAAGAAAAA GCGAG ACAATG CTCGC TTTTCTTAATGGGTA TERM 3214 1942256 - 1942241 - R 86 -6.1 -5.5454 | opp_overlap 1942241 1942236 GTAAACAAAGAAAAA GCGAG ACAATG CTCGC TTTTCTTAATGGGTA def 1942739 - 1942275 - | peptide deformylase smf 1942973 - 1944127 + | protein smf (DNA-processing chain A) TERM 3215 1944132 - 1944149 + T 73 -7 -3.91084 | opp_overlap 1944132 TCAGACAATAAAAAA CGGCAT CCGAAA ATGCCG TTTGATTCACAATAG TERM 3216 1944149 - 1944132 - T 93 -7.7 -5.60689 | opp_overlap 1944132 TCAGACAATAAAAAA CGGCATC CGAA AATGCCG TTTGATTCACAATAG APL_1713 1946177 - 1944171 - | hypothetical protein TERM 3217 1945286 - 1945262 - G 71 -8.5 -3.53012 | opp_overlap 1945263, overlap 1945263 TCGTTTTCGGCGAAA GGTCTTGCGCG GTA CGCTCAAGACT TTGCATTGACGGATC TERM 3218 1945285 - 1945263 - G 83 -12 -2.71712 | opp_overlap 1945263, overlap 1945262 CGTTTTCGGCGAAAG GTCTTGCGCG GTA CGCTCAAGAC TTTGCATTGACGGAT TERM 3219 1945263 - 1945285 + g 100 -12 -3.75332 | opp_overlap 1945263 1945262 CGTTTTCGGCGAAAG GTCTTGCGCG GTA CGCTCAAGAC TTTGCATTGACGGAT TERM 3220 1946331 - 1946303 - R 100 -13.4 -5.49234 | opp_overlap 1946307 ATATGGAACAAAAAA TAAAGCCGATTT TATTC AAATCGGCTTTA AGTGAGAGTATGTCT TERM 3221 1946307 - 1946327 + r 82 -9.8 -3.65529 | opp_overlap 1946303 GGAACAAAAAATAAA GCCGATTT TATTC AAATCGGC TTTAAGTGAGAGTAT ulaA 1947754 - 1946399 - | ascorbate-specific PTS system enzyme IIC TERM 3222 1946705 - 1946683 - G 74 -9.8 -3.10796 | TGGCATTACCGAATA CGCCTGCGGT TGC ACCGCAGAAG AAGTGCGGCACCACG TERM 3223 1947461 - 1947478 + g 77 -6.3 -4.74504 | overlap 1947463 GAACGCCATAATCAG TGCGGTA GCGG TACCGTA TTTTTCGATTGCCAT sgaB 1948035 - 1947763 - | phosphotransferase system, galactitol-specific IIB component TERM 3224 1947935 - 1947923 - G 70 -7.7 -3.6215 | GTAACGGAGGCTAAA TCGGT ATG ACCGA CTTCCGCATCAACCC TERM 3225 1948182 - 1948195 + H 70 -2.3 -5.26119 | AAAGGGGATTTTATC GGCGA TGGT TCGGC TTTTATTTTTGAGGA secE 1948338 - 1948751 + | preprotein translocase subunit SecE TERM 3226 1948888 - 1948864 - g 73 -10.1 -3.024 | opp_overlap 1948861 1948859, overlap 1948861 1948866 GAATATATCAAATTA CACCAAATGGA AGA TCAATTTGGTG AAGTATTAGTACCGA nusG 1948786 - 1949316 + | transcription antitermination protein NusG TERM 3227 1949522 - 1949541 + F 95 -8.6 -5.71712 | AATAACCGCCCTATA CGAGTTGG CTTG CTAACTCG TTTTTTTGTGTAACA rplK 1949605 - 1950033 + | 50S ribosomal protein L11 rplA 1950038 - 1950727 + | 50S ribosomal protein L1 TERM 3228 1950755 - 1950783 + F 79 -9.7 -3.17075 | opp_overlap 1950755, overlap 1950764 1950782 GTTAAAACTTTACAA GGTCGTGGATTAT TGT ATAATTTGCGACC TTAACTTGCGAGAGC rplJ 1951016 - 1951507 + | 50S ribosomal protein L10 rplL 1951568 - 1951936 + | 50S ribosomal protein L7/L12 TERM 3229 1951977 - 1951996 + F 100 -13.6 -4.87318 | opp_overlap 1951977 TCAAGTTCAACAAAA CCCCGATG GAAA CATCGGGG TTTTTGCATTTTAGA TERM 3230 1951996 - 1951977 - f 100 -13.6 -4.68103 | opp_overlap 1951977 TCAAGTTCAACAAAA CCCCGATG GAAA CATCGGGG TTTTTGCATTTTAGA APL_1722 1952100 - 1952372 + | hypothetical protein APL_1723 1952377 - 1953633 + | hypothetical protein TERM 3231 1953639 - 1953658 + F 100 -10 -4.92239 | opp_overlap 1953639 TTGTAGTTAGGTAAA CCCCGATG GAAA CATTGGGG TTTTTGCATTTTTAG TERM 3232 1953658 - 1953639 - f 71 -7.8 -3.6682 | opp_overlap 1953639 TTGTAGTTAGGTAAA CCCCGATG GAAA CATTGGGG TTTTTGCATTTTTAG TERM 3233 1953718 - 1953737 + F 71 -8.6 -3.00017 | TAATTAATCAATTTT TCTAGGAG TATA CTCCTAGG TGCTTTAGCTTTACA TERM 3234 1953965 - 1953934 - f 71 -6.8 -4.2558 | overlap 1953938 1953942 CATTGTCCATGAAAA TTAAGAAATCTGAT CGCC ATCAAATTTCTTCA AAGCCATTTAAAATT TERM 3235 1953961 - 1953938 - f 73 -7.6 -3.71672 | overlap 1953934 1953942 GTCCATGAAAATTAA GAAATCTGAT CGCC ATCAAATTTC TTCAAAGCCATTTAA APL_1724 1954021 - 1954560 + | hypothetical protein TERM 3236 1954812 - 1954830 + F 79 -8.2 -3.93009 | TTAATAGAGGCGATT GAAAACCG AGA TGGTTTTC TTTCAATTTATCTTA TERM 3237 1955179 - 1955217 + F 100 -12.6 -4.64766 | opp_overlap 1955180, overlap 1955180 AAAAGGTTGGTAAAA AGTGGGTTAAAGCCTTAT AGT ACAAGGCTTTAACCTACC TTTTTGAAATATGAA TERM 3238 1955216 - 1955180 - f 100 -16.1 -4.58685 | opp_overlap 1955180 1955179 AAAGGTTGGTAAAAA GTGGGTTAAAGCCTTAT AGT ACAAGGCTTTAACCTAC CTTTTTGAAATATGA TERM 3239 1955180 - 1955216 + F 100 -16.1 -3.38378 | opp_overlap 1955180, overlap 1955179 AAAGGTTGGTAAAAA GTGGGTTAAAGCCTTAT AGT ACAAGGCTTTAACCTAC CTTTTTGAAATATGA TERM 3240 1955468 - 1955456 - g 70 -5.5 -4.45485 | opp_overlap 1955456, overlap 1955466 ACGATATTTAGAAAA GGCTC CTA AAGCC TTCTTAAAAGCCCCT APL_1725 1955367 - 1956155 + | hypothetical protein APL_1726 1956260 - 1956808 + | hypothetical protein TERM 3241 1956988 - 1957010 + F 100 -10.6 -4.5442 | opp_overlap 1956987 1956986 TAAACTATGCAAATT GGCTAGATGA TTT TCTTCTAGCC TTTTGTGCTTGGAAG TERM 3242 1961158 - 1961148 - g 71 -3.2 -4.91459 | overlap 1961136 GAAGATGTATAAAAA CATC GTG GACG GCACACATCAAATGG rpoB 1957228 - 1961256 + | DNA-directed RNA polymerase subunit beta TERM 3243 1961272 - 1961308 + F 100 -12.5 -3.9009 | opp_overlap 1961257 1961271 1961272, overlap 1961260 TCGTCAGCCGTAAAG CGGTCGAATTTGGTAAA AAT TTTGCAAAATTTGACCG TTTGTAAAATAGATT TERM 3244 1961464 - 1961476 + G 72 -7.7 -3.8613 | TTGGTTTAGCATCAC CGGAT AAA ATCCG TTCTTGGTCTTTCGG TERM 3245 1961869 - 1961855 - g 91 -5 -5.64274 | overlap 1961839 1961866 1961867 CGATTTAGAAAAAAA TCAGTT ATT AACCGA AGAACAGTTCTTAGA TERM 3246 1962088 - 1962072 - g 70 -8 -3.66732 | GAAGCATTCCAACAA TCCGGT AACAA ACCGGA GTGGATGGTAATGAC TERM 3247 1963350 - 1963335 - g 91 -7.6 -4.83169 | ATTCCGGCACAAAAA CACGAA ATTA TTCGTG CGGCGGAAGCAGAAG TERM 3248 1965540 - 1965513 - g 72 -7.8 -3.77722 | gap 1, opp_overlap 1965531, overlap 1965516 1965534 CGTAACCAGCAAGAA CAAGCGGTCGCTT TTG AAGC-ACCGGTTG AAAAGCTAACGGGTT rpoC 1961382 - 1965620 + | DNA-directed RNA polymerase subunit beta' TERM 3249 1965710 - 1965675 - f 89 -9 -4.61868 | opp_overlap 1965680, overlap 1965680 TATCGATAGAGAAAA GTAAAGCCTCCAGAAC GAAA GTTCTGGGGGCTTTTT GTTAGGAATATTATA TERM 3250 1965705 - 1965680 - f 100 -13.3 -4.31065 | opp_overlap 1965680, overlap 1965675 ATAGAGAAAAGTAAA GCCTCCAGAAC GAAA GTTCTGGGGGC TTTTTGTTAGGAATA TERM 3251 1965680 - 1965705 + F 100 -15.5 -5.07486 | opp_overlap 1965680 1965675 ATAGAGAAAAGTAAA GCCTCCAGAAC GAAA GTTCTGGGGGC TTTTTGTTAGGAATA APL_1729 1965725 - 1967146 + | hypothetical protein TERM 3252 1967454 - 1967483 + F 89 -10.7 -3.69323 | overlap 1967456 1967458 TGTGGTATATACCCC GATAGCGCCCGTC TCCT GACGGGTGCTGTG TTTGAATCCTACTGA TERM 3253 1967456 - 1967481 + F 93 -13.3 -3.42663 | overlap 1967454 1967458 TGGTATATACCCCGA TAGCGCCCGTC TCCT GACGGGTGCTG TGTTTGAATCCTACT TERM 3254 1967458 - 1967479 + F 93 -13.7 -3.28122 | overlap 1967456 1967454 GTATATACCCCGATA GCGCCCGTC TCCT GACGGGTGC TGTGTTTGAATCCTA TERM 3255 1967531 - 1967511 - f 86 -11.1 -3.32294 | opp_overlap 1967506 1967511 TGAAAGTTTGTACAA GCACTCGTC AGA GACGAGAGC TATCATTTCTAGGAA TERM 3256 1967511 - 1967531 + F 83 -11.1 -3.05997 | opp_overlap 1967511, overlap 1967506 TGAAAGTTTGTACAA GCACTCGTC AGA GACGAGAGC TATCATTTCTAGGAA TERM 3257 1967625 - 1967568 - f 100 -9.5 -5.60689 | gap 1, opp_overlap 1967569 1967572, overlap 1967569 1967572 GCAGAGAATAAAAAA TCAAGCGGTTAAATTCCCCTATAATTTT GCA AAAAAT-TCGGGAAATTTAACCGCTTAT GTTTTATAAACTTAC TERM 3258 1967624 - 1967569 - f 100 -13 -3.94787 | gap 1, opp_overlap 1967569 1967572, overlap 1967568 1967572 CAGAGAATAAAAAAT CAAGCGGTTAAATTCCCCTATAATTTT GCA AAAAAT-TCGGGAAATTTAACCGCTTA TGTTTTATAAACTTA TERM 3259 1967621 - 1967572 - f 100 -12.5 -4.05512 | gap 1, opp_overlap 1967569 1967572, overlap 1967569 1967568 AGAATAAAAAATCAA GCGGTTAAATTCCCCTATAATTTT GCA AAAAAT-TCGGGAAATTTAACCGC TTATGTTTTATAAAC TERM 3260 1967572 - 1967621 + F 93 -10.3 -4.02581 | gap 1, opp_overlap 1967572 1967569 1967568, overlap 1967569 AGAATAAAAAATCAA GCGGTTAAATTCCCCTATAATTTT GCA AAAAAT-TCGGGAAATTTAACCGC TTATGTTTTATAAAC TERM 3261 1967703 - 1967717 + F 70 -4.2 -4.66833 | AATCGTAATTGGCTT GTTGGT GGA GCCAGC TTTTTGGACTTGGGC APL_1730 1967877 - 1968107 + | hypothetical protein APL_1731 1968119 - 1968505 + | hypothetical protein TERM 3262 1968528 - 1968543 + T 100 -10.4 -4.323 | opp_overlap 1968526 ACTTTGATAATACTT GCCCTC TAAT GAGGGC TTTTAAATATTTCCA TERM 3263 1968620 - 1968571 - T 74 -6.7 -4.30793 | gap 1, opp_overlap 1968568 1968571, overlap 1968568 CCAGATAACAAACAA GCGGTTAAATTCCCTTATAATTTT GCA AAAAATGCGAG-GAATTTAACCGC TGATTGCTTTATGGA APL_1732 1969056 - 1968640 - | hypothetical protein TERM 3264 1969155 - 1969192 + H 81 -10.7 -2.92495 | opp_overlap 1969155, overlap 1969152 1969150 TTTAGCAGCAAACAA GCGGTTGAATTTGCAAG ATTT TTTGTAATTTCGACCGC TGATATTTCTGTAAA APL_1733 1969302 - 1969952 + | hypothetical protein TERM 3265 1969996 - 1969972 - T 74 -5.7 -4.65032 | opp_overlap 1969972 TAAATCAGAAAGAAA GGCTGAATC AAAATAA GGTTCAGCC TTTTCTATTTTAATC TERM 3266 1969972 - 1969996 + T 88 -7.9 -4.91977 | opp_overlap 1969972 TAAATCAGAAAGAAA GGCTGAATC AAAATAA GGTTCAGCC TTTTCTATTTTAATC APL_1734 1970911 - 1970132 - | hypothetical protein TERM 3267 1970931 - 1970969 + r 75 -8.3 -3.85209 | opp_overlap 1970931 1970933 TCTCGTATATTAAAA GTGGTCAAAATCTGC AAAAAATCC GCAAATTTTGACCGC TTGTTATCCGTTAAT TERM 3268 1970969 - 1970931 - R 100 -12.6 -4.34402 | opp_overlap 1970931, overlap 1970933 TCTCGTATATTAAAA GTGGTCAAAATCTGCAAA AAA TCCGCAAATTTTGACCGC TTGTTATCCGTTAAT TERM 3269 1970967 - 1970933 - R 89 -13.8 -2.51871 | opp_overlap 1970931, overlap 1970931 TCGTATATTAAAAGT GGTCAAAATCTGCAAA AAA TCCGCAAATTTTGACC GCTTGTTATCCGTTA hslU 1972306 - 1970984 - | ATP-dependent protease ATP-binding subunit TERM 3270 1971144 - 1971156 + g 82 -4.8 -5.37593 | TGTAAGCGACGAGCA CCGA TGTTT TCGG TTTTTTCGTTTACAC TERM 3271 1971431 - 1971412 - G 71 -2.2 -5.08878 | opp_overlap 1971418 1971427 AACAGATAAATAAAA TATGGT CGGTTTTT ACCATA CCGTGTTTGGTATTG TERM 3272 1972328 - 1972356 + r 100 -10.3 -5.11937 | opp_overlap 1972329 1972330, overlap 1972329 1972330 TGTTCCTTCTAAATA ACTCCCCCTCTTT AGC AAAGAGGGGGACA TTTTTTAAACTTCTT TERM 3273 1972355 - 1972329 - R 100 -13.8 -3.90744 | opp_overlap 1972328 1972329 1972330, overlap 1972330 GTTCCTTCTAAATAA CTCCCCCTCTTT AGC AAAGAGGGGGAC ATTTTTTAAACTTCT TERM 3274 1972329 - 1972355 + r 100 -13.8 -3.65535 | opp_overlap 1972329 1972330, overlap 1972328 1972330 GTTCCTTCTAAATAA CTCCCCCTCTTT AGC AAAGAGGGGGAC ATTTTTTAAACTTCT TERM 3275 1972354 - 1972330 - R 100 -17.3 -2.94232 | opp_overlap 1972329 1972328 1972330, overlap 1972329 TTCCTTCTAAATAAC TCCCCCTCTTT AGC AAAGAGGGGGA CATTTTTTAAACTTC TERM 3276 1972330 - 1972354 + r 100 -17.3 -2.78237 | opp_overlap 1972330 1972329, overlap 1972329 1972328 TTCCTTCTAAATAAC TCCCCCTCTTT AGC AAAGAGGGGGA CATTTTTTAAACTTC hslV 1972882 - 1972361 - | ATP-dependent protease peptidase subunit sfsA 1973674 - 1972961 - | sugar fermentation stimulation-like protein TERM 3277 1973283 - 1973327 + g 73 -7.1 -4.08394 | opp_overlap 1973283, overlap 1973320 1973322 TTCACTTCTGCAAAA CAGTCGGGCTGATTGTCCGCT TTG AGCAGAAAATCAATGCGGCTG TTTTCCGAGCCGTAT TERM 3278 1973327 - 1973283 - G 73 -7.1 -4.08767 | opp_overlap 1973283 1973320 1973322 TTCACTTCTGCAAAA CAGTCGGGCTGATTGTCCGCT TTG AGCAGAAAATCAATGCGGCTG TTTTCCGAGCCGTAT TERM 3279 1973320 - 1973341 + g 73 -3.7 -5.06414 | opp_overlap 1973283, overlap 1973283 1973322 TGAGCAGAAAATCAA TGCGGCT GTTTTCCG AGCCGTA TTTTTGTTCGGGCAA TERM 3280 1973635 - 1973625 - G 78 -5.4 -5.02476 | opp_overlap 1973625 ATATCGGCTAAAAAA CGTT TAT AACG TTTGATTAATATGCC TERM 3281 1973720 - 1973703 - R 100 -9.9 -6.02919 | opp_overlap 1973703 TTATAAAGAAAAAAA CCGCTTT TTGC AAAGCGG TTTTTGTGTCAAACT TERM 3282 1973703 - 1973720 + r 100 -9.9 -4.9725 | opp_overlap 1973703 TTATAAAGAAAAAAA CCGCTTT TTGC AAAGCGG TTTTTGTGTCAAACT TERM 3283 1973756 - 1973787 + r 89 -11.8 -3.2794 | ACGGTTGGTCAAGTT GTTATTACTTGACT GGCG GGTCAGGTAATAAC TTAATCTCGATCAGC APL_1738 1974324 - 1973932 - | lactoylglutathione lyase and related lyases TERM 3284 1974462 - 1974472 + G 71 -8.2 -3.53224 | opp_overlap 1974456 TAGCACAATCTGATC CGGC TCA GCCG TTTGCCAAAGCAGTA TERM 3285 1974595 - 1974585 - g 74 -6.8 -4.32177 | TGATGTTACAACAAA CGCA GGT TGCG ACCGTTATTCCGTAT mutY 1974422 - 1975567 + | A/G-specific adenine glycosylase APL_1740 1975571 - 1975846 + | hypothetical protein TERM 3286 1976382 - 1976362 - g 77 -6.2 -4.72188 | opp_overlap 1976331 TTAATCCAAAATAAA TTGCAAAC TCGTC GCTTGCAA AACGGCAGAACAGTA TERM 3287 1976588 - 1976611 + G 75 -6 -4.59773 | gap 1, opp_overlap 1976583, overlap 1976591 GCTTAATGCAGGTTG TACCGCGTACC GCC GG-ACGCGATA TTTTTGCCCGTAAAG mltC 1975864 - 1976961 + | murein transglycosylase C TERM 3288 1977128 - 1977112 - f 81 -10.9 -2.62616 | opp_overlap 1977125, overlap 1977125 TCAGTCGGTAGAGCA GGGGATT GAA AATCCCC GTGTCGGTGGTTCGA TERM 3289 1977273 - 1977253 - f 83 -11.2 -2.6356 | opp_overlap 1977246 1977253, overlap 1977252 AGCCATATTCAGAAG CCCTGATG TTTTT CATCAGGG TTTTACTTTATCAGT TERM 3290 1977253 - 1977273 + F 100 -11.2 -4.62475 | opp_overlap 1977253 1977252, overlap 1977246 AGCCATATTCAGAAG CCCTGATG TTTTT CATCAGGG TTTTACTTTATCAGT TERM 3291 1977417 - 1977401 - f 81 -10.9 -2.62616 | opp_overlap 1977414, overlap 1977414 TCAGTCGGTAGAGCA GGGGATT GAA AATCCCC GTGTCGGTGGTTCGA TERM 3292 1977537 - 1977568 + F 100 -6.6 -6.34616 | overlap 1977542 GGAGGAGCCATATTC GGAAGCCCTGATGA GAAA TCATCGGGGTTTTG TTTTTTTTATTTTCC TERM 3293 1977542 - 1977563 + F 100 -10.9 -5.69976 | overlap 1977537 AGCCATATTCGGAAG CCCTGATGA GAAA TCATCGGGG TTTTGTTTTTTTTAT TERM 3294 1977744 - 1977774 + F 100 -14.9 -5.42131 | GAATATCGTCTGTTT TGCGGCATTACTT CTTAA AAGTAGTGCCGCA TTTTTTATATGCTTA TERM 3295 1978943 - 1978929 - g 70 -5.7 -4.30933 | CAGAAATTCAAGAAA GGTGA CGATT TCACC CTTGAAGATTTCCGT srp54 1977954 - 1979345 + | signal recognition particle protein (sigma-54 like protein) TERM 3296 1979389 - 1979368 - T 95 -13.1 -3.73775 | opp_overlap 1979368 1979386 TTTATTTCTATCAAA TCCCCGTTT AGTT AAACGGGGA TTTTTTTATATCCCT TERM 3297 1979368 - 1979389 + T 100 -13.1 -5.72616 | opp_overlap 1979368, overlap 1979386 TTTATTTCTATCAAA TCCCCGTTT AGTT AAACGGGGA TTTTTTTATATCCCT TERM 3298 1979386 - 1979403 + T 73 -4.1 -4.89063 | opp_overlap 1979368, overlap 1979368 CCGTTTAGTTAAACG GGGATTT TTTT ATATCCC TTTGTTTTTAGATAA APL_1743 1981163 - 1979499 - | Ser/Thr protein phosphatase family protein TERM 3299 1981144 - 1981154 + g 81 -5.4 -5.19212 | opp_overlap 1981144 GATAATACCAATAAA GTAC CGA GTAC TTTTTTCATGATGAT TERM 3300 1981347 - 1981298 - R 100 -15.3 -4.07885 | gap 1, opp_overlap 1981304, overlap 1981301 GAGTGTTTGCGAAAA CAGCAAGCGGTCGAATTTCGCAAA AAA TCTGCAAAACTTGACCGCTTG-TG ATGAGAGCTATAAAC TERM 3301 1981345 - 1981301 - R 100 -18.1 -2.78032 | opp_overlap 1981304, overlap 1981298 TGTTTGCGAAAACAG CAAGCGGTCGAATTTCGCAAA AAA TCTGCAAAACTTGACCGCTTG TGATGAGAGCTATAA TERM 3302 1981304 - 1981342 + r 81 -9.6 -3.4072 | opp_overlap 1981301 1981298 TTGCGAAAACAGCAA GCGGTCGAATTTCGCAAA AAA TCTGCAAAACTTGACCGC TTGTGATGAGAGCTA ubiF 1982521 - 1981355 - | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase APL_1745 1982863 - 1982555 - | hypothetical protein APL_1746 1983150 - 1982836 - | hypothetical protein TERM 3303 1984225 - 1984240 + G 79 -3.2 -5.40474 | GGTGAAATCAGTTTG GCACAC AATG GTGTTC TTTTTTTAGACGAAT comM 1983337 - 1984863 + | competence protein comM TERM 3304 1985156 - 1985144 - g 82 -3.3 -5.48825 | overlap 1985126 1985150 1985151 GAGCAGCCAAAAAAA GAGGA AGC TCCGC AAGCGGATAGCCCGA APL_1748 1984988 - 1986091 + | Outer membrane lipoprotein A precursor TERM 3305 1986137 - 1986110 - T 76 -10 -2.83403 | opp_overlap 1986115, overlap 1986115 CTTTGCTTACCAAAC TAAAAGCTATCC TTCG GGATAGCTTTTT TACTTTTTAATCAGT TERM 3306 1986115 - 1986132 + T 100 -9.9 -5.54079 | opp_overlap 1986110 1986115 CTTACCAAACTAAAA GCTATCC TTCG GGATAGC TTTTTTACTTTTTAA TERM 3307 1986132 - 1986115 - T 100 -9.9 -4.58773 | opp_overlap 1986115, overlap 1986110 CTTACCAAACTAAAA GCTATCC TTCG GGATAGC TTTTTTACTTTTTAA APL_1749 1986901 - 1986137 - | acyl-CoA thioester hydrolase YfbB TERM 3308 1986825 - 1986795 - G 79 -8.3 -4.09739 | opp_overlap 1986794 1986796, overlap 1986796 CGAATTTGCGGAAAA TTTTGCAAGCGGT CTAGC ACCGCTTGCCAAT CTTGTTGCGAACCGA TERM 3309 1986796 - 1986824 + g 89 -11.8 -3.38812 | opp_overlap 1986795 1986796, overlap 1986794 GAATTTGCGGAAAAT TTTGCAAGCGGT CTAGC ACCGCTTGCCAA TCTTGTTGCGAACCG TERM 3310 1986824 - 1986796 - G 86 -11.8 -3.05522 | opp_overlap 1986796 1986794, overlap 1986795 GAATTTGCGGAAAAT TTTGCAAGCGGT CTAGC ACCGCTTGCCAA TCTTGTTGCGAACCG menD 1988607 - 1986901 - | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase TERM 3311 1988221 - 1988199 - G 71 -8.4 -3.51232 | opp_overlap 1988195, overlap 1988161 1988195 GTTTCGGCAAATTAA CGCCGGCTAT CGG ATAATCGGCG AAAATACCTTGCTGC APL_1751 1988860 - 1989453 + | hypothetical protein nanE 1989491 - 1990180 + | N-acetylmannosamine-6-phosphate 2-epimerase nanK 1990190 - 1991062 + | N-acetylmannosamine kinase nanA 1991083 - 1991961 + | N-acetylneuraminate lyase nagB 1992011 - 1992814 + | glucosamine-6-phosphate deaminase TERM 3312 1993397 - 1993368 - g 72 -9.3 -3.14962 | gap 1, overlap 1993365 TGATTACCAAAATTA CCTTAGCGG-CGGA AAA TCCGACCGCAAAAG CGATTCCCGAGTTTG nagA 1992866 - 1994011 + | N-acetylglucosamine-6-phosphate deacetylase TERM 3313 1994117 - 1994134 + T 100 -9.9 -4.3467 | opp_overlap 1994117 TGACATAGTAAAAAA GGCTATC GTTT GATAGCC TTTTCATATAAGAAT TERM 3314 1994134 - 1994117 - T 100 -9.9 -5.24989 | opp_overlap 1994117 TGACATAGTAAAAAA GGCTATC GTTT GATAGCC TTTTCATATAAGAAT fumC 1995554 - 1994160 - | fumarate hydratase APL_1758 1996365 - 1995709 - | DNA transformation protein TERM 3315 1996571 - 1996599 + H 84 -8.3 -4.63184 | TTGCCACTTTAACGC TCATCGTATTTAT GAT ATAGATACGAAGA TTTTTAGAGTCGCTT rpsJ 1996773 - 1997084 + | 30S ribosomal protein S10 rplC 1997110 - 1997736 + | 50S ribosomal protein L3 rplD 1997752 - 1998354 + | 50S ribosomal protein L4 TERM 3316 1998390 - 1998378 - g 76 -7.7 -4.08692 | GAACGTTTGCTAAAA GTGCT TAA AGCAC CACATATCTCTGAAA rplW 1998351 - 1998656 + | 50S ribosomal protein L23 rplB 1998677 - 1999498 + | 50S ribosomal protein L2 TERM 3317 1999627 - 1999613 - g 73 -2.8 -5.24531 | AGCGGGGATAAAAAA CCAATT AAA ACTTGG TCCCGTCGTTCAATG rpsS 1999526 - 1999801 + | 30S ribosomal protein S19 rplV 1999812 - 2000144 + | 50S ribosomal protein L22 rpsC 2000163 - 2000870 + | 30S ribosomal protein S3 rplP 2000884 - 2001294 + | 50S ribosomal protein L16 rpmC 2001294 - 2001485 + | 50S ribosomal protein L29 rpsQ 2001485 - 2001739 + | 30S ribosomal protein S17 TERM 3318 2001760 - 2001780 + F 100 -11.9 -5.08011 | opp_overlap 2001760 2001763 AAATTTATTGATAAA CAAGCGGTG TAA TACCGCTTG TTTTTTACAAATTTT TERM 3319 2001780 - 2001760 - f 93 -11.2 -3.93984 | opp_overlap 2001760, overlap 2001763 AAATTTATTGATAAA CAAGCGGT GTAAT ACCGCTTG TTTTTTACAAATTTT TERM 3320 2001777 - 2001763 - f 75 -7.1 -4.09117 | opp_overlap 2001760, overlap 2001760 TTTATTGATAAACAA GCGGT GTAAT ACCGC TTGTTTTTTACAAAT TERM 3321 2001798 - 2001821 + F 88 -6.1 -5.73978 | gap 1, opp_overlap 2001807 TTTTACAAATTTTAA GCCCTAA-AG CTAAA CTGTTAGGGC TTTTTTATTTGTAAT TERM 3322 2001912 - 2001934 + F 71 -6.3 -4.25104 | AGGTATAATTCGCCA CCTGCTTAC ATAGG GTAAGTGGG TTTTCGTCCCGAAAG rplX 2002361 - 2002672 + | 50S ribosomal protein L24 rplE 2002690 - 2003229 + | 50S ribosomal protein L5 rpsN 2003241 - 2003546 + | 30S ribosomal protein S14 rpsH 2003583 - 2003975 + | 30S ribosomal protein S8 TERM 3323 2004290 - 2004302 + G 72 -7.7 -3.85165 | opp_overlap 2004289 2004290 GAGCACAAATGAAAG GCAAC GTA GTTGC TTTAAGTTTAGGCTA rplF 2003992 - 2004525 + | 50S ribosomal protein L6 rplR 2004540 - 2004893 + | 50S ribosomal protein L18 rpsE 2004908 - 2005408 + | 30S ribosomal protein S5 rpmD 2005415 - 2005594 + | 50S ribosomal protein L30 TERM 3324 2005782 - 2005792 + G 70 -5.4 -4.4959 | overlap 2005790 TTATACCGTCGTTTA CCAA AAT TTGG TTTTACTTCATTAAA rplO 2005599 - 2006033 + | 50S ribosomal protein L15 TERM 3325 2006482 - 2006466 - g 74 -9.5 -3.3676 | opp_overlap 2006461 2006459 2006453 CCGAATATGTTACAA GGATTAG TTC CTAATCC AAGTATCTTATTCTA TERM 3326 2006526 - 2006538 + G 70 -7.7 -3.60661 | ATCAGCCTAGTTACG GGAAC AAT GTTCC TTATGTGGTTAGGTG secY 2006037 - 2007359 + | preprotein translocase subunit SecY rpmJ 2007385 - 2007498 + | 50S ribosomal protein L36 TERM 3327 2007553 - 2007519 - f 80 -9.3 -3.53091 | opp_overlap 2007522 2007522 2007525, overlap 2007522 ATTCTTTCTTGCAAA GAACCCGCTGAGCAG GTATA CTGCTCAGCTCATTC GTCCTGATATGCTGT TERM 3328 2007534 - 2007522 - f 73 -6.9 -3.90744 | opp_overlap 2007522 2007522 2007525, overlap 2007519 CTTTCTTGCAAAGAA CCCGC TGA GCAGG TATACTGCTCAGCTC TERM 3329 2007525 - 2007547 + F 89 -13.5 -2.80492 | opp_overlap 2007522 2007519, overlap 2007522 2007522 TCTTGCAAAGAACCC GCTGAGCAG GTATA CTGCTCAGC TCATTCGTCCTGATA rpsM 2007635 - 2007991 + | 30S ribosomal protein S13 rpsK 2008008 - 2008397 + | 30S ribosomal protein S11 TERM 3330 2008577 - 2008593 + G 71 -9.5 -3.05384 | GCAAGCCACGTTTAT CTGACTA CGG TAGTCAG TTACGTGAAAAACAA rpsD 2008426 - 2009052 + | 30S ribosomal protein S4 TERM 3331 2009126 - 2009138 + G 74 -6.3 -4.56597 | GGATAAAATGCAGGG TTCTG TGA CAGAA TTTTTAAAGCCGCAC TERM 3332 2009880 - 2009847 - g 78 -9 -3.75629 | opp_overlap 2009857 2009879, overlap 2009850 2009856 CAGCCTGAAGTGAAA GAAGAAAAACCGGA GTTCGA TCCGATTTTACTTC GTCCGGTAGATGATT TERM 3333 2009871 - 2009856 - g 76 -2.5 -5.38549 | opp_overlap 2009857, overlap 2009850 2009847 GTGAAAGAAGAAAAA CCGGA GTTCGA TCCGA TTTTACTTCGTCCGG TERM 3334 2010107 - 2010077 - g 81 -11.2 -3.28924 | opp_overlap 2010077 TATGCGCCTTGAGAA TTGGCCTCCGGCAA GTA TTGCCGAAGACTAA TTTTAGGTATTAGAT TERM 3335 2010077 - 2010107 + G 86 -9 -4.28656 | opp_overlap 2010077 TATGCGCCTTGAGAA TTGGCCTCCGGCAA GTA TTGCCGAAGACTAA TTTTAGGTATTAGAT rpoA 2009118 - 2010107 + | DNA-directed RNA polymerase subunit alpha TERM 3336 2010188 - 2010202 + F 77 -10 -3.13432 | opp_overlap 2010186 AACCGTAACAGCAGC CATCGC CAA GCGATG TTCCGTAATATTGGC rplQ 2010213 - 2010527 + | 50S ribosomal protein L17 TERM 3337 2010547 - 2010572 + F 100 -11.9 -5.46629 | opp_overlap 2010539 2010551, overlap 2010551 TTAAACAGCTTATCT GAAAGCCCGAG TTAT CTCGGGCTTTA TTTTTTTCCGATATT TERM 3338 2010568 - 2010551 - f 95 -12.7 -3.60805 | opp_overlap 2010551 2010547, overlap 2010539 ACAGCTTATCTGAAA GCCCGAG TTAT CTCGGGC TTTATTTTTTTCCGA TERM 3339 2010551 - 2010568 + F 100 -12.7 -5.20328 | opp_overlap 2010539 2010551, overlap 2010547 ACAGCTTATCTGAAA GCCCGAG TTAT CTCGGGC TTTATTTTTTTCCGA TERM 3340 2010710 - 2010728 + F 74 -3.1 -5.32396 | opp_overlap 2010689, overlap 2010716 AAAGCAATTTTAGTA CCCTC ACCTCGAAC GAGGG TTTTATTTTTACTAT rpsP 2010764 - 2011012 + | 30S ribosomal protein S16 rimM 2011046 - 2011573 + | 16S rRNA-processing protein TERM 3341 2011957 - 2011967 + G 73 -5.4 -4.61873 | opp_overlap 2011957, overlap 2011951 GACACTGGCTTCAAA TCAG AAA CTGA TTTTAATTTGTGGAC trmD 2011631 - 2012386 + | tRNA (guanine-N(1)-)-methyltransferase rplS 2012412 - 2012762 + | 50S ribosomal protein L19 TERM 3342 2012816 - 2012787 - T 79 -9.4 -3.41222 | opp_overlap 2012787 2012792, overlap 2012792 GCTTAATGCGAAAGA TAAAAGGCTTGG GGAAAT CCAAGCCTTTTC TTTTATATGGTAAGC TERM 3343 2012787 - 2012816 + T 100 -10.1 -4.57353 | opp_overlap 2012787 2012792, overlap 2012792 GCTTAATGCGAAAGA TAAAAGGCTTGGG GAAA TCCAAGCCTTTTC TTTTATATGGTAAGC TERM 3344 2012811 - 2012792 - T 100 -9.3 -4.79451 | opp_overlap 2012787 2012792, overlap 2012787 ATGCGAAAGATAAAA GGCTTGG GGAAAT CCAAGCC TTTTCTTTTATATGG TERM 3345 2012792 - 2012811 + T 100 -10 -5.23292 | opp_overlap 2012792 2012787, overlap 2012787 ATGCGAAAGATAAAA GGCTTGGG GAAA TCCAAGCC TTTTCTTTTATATGG TERM 3346 2012912 - 2012895 - T 77 -3.3 -5.42198 | TTGTAAAAAATAAAA GGCAAGA ATAT CCCCGCC TTTATGGTGAAATAA APL_1790 2014125 - 2012932 - | hypothetical protein TERM 3347 2013644 - 2013629 - G 74 -7.6 -3.91908 | opp_overlap 2013628 2013629 ATATCGTCAAAAATA CGAATC GGCT GATTCG GTTTAAATTCGGTGG APL_1791 2014341 - 2015456 + | putative periplasmic iron/siderophore binding protein TERM 3348 2015494 - 2015521 + G 71 -6.9 -4.14859 | opp_overlap 2015494 AAAGATCGTTCAAAA CCAACGCAAGC TGGAAC GCAAGCGTTGG TTTATCGTTCTTACT TERM 3349 2015521 - 2015494 - g 71 -6.9 -4.11773 | opp_overlap 2015494 AAAGATCGTTCAAAA CCAACGCAAGC TGGAAC GCAAGCGTTGG TTTATCGTTCTTACT APL_1792 2015459 - 2016340 + | Fe(III) dicitrate ABC transporter, permease TERM 3350 2016509 - 2016492 - g 71 -4.2 -4.77036 | CCTCATTATTAAAAA CGATTT TTGGAG AAATCG GCTGTAAAGGACATA APL_1793 2016356 - 2017123 + | Fe(III) dicitrate ABC transporter, ATP-binding protein APL_1794 2017133 - 2017564 + | pseudoazurin TERM 3351 2018643 - 2018658 + G 82 -3.2 -5.5074 | CCAATATTTGCCGGT TGTACC GCAA GGCACA TTTTTTATTAAGTTA APL_1795 2017573 - 2018679 + | putative periplasmic iron/siderophore binding protein TERM 3352 2018694 - 2018719 + F 77 -5.3 -5.01732 | opp_overlap 2018693 ACTATTCAATTTAAT GGCAAGCGGGC TTTG GCTCACTTACC TTTTTTGAGCCGATT TERM 3353 2019336 - 2019311 - g 93 -12.5 -3.03243 | AGTCATGCGGTAAGA CGCCAACCGCC CAAA GGCGAATGGCG GGCAAATTCAGCCTA APL_1796 2018735 - 2019586 + | hypothetical protein TERM 3354 2019589 - 2019621 + T 87 -9.9 -4.05446 | AACAGAAATGTGACC GCTTAACGGATGC CAAATCC GCGCCCGTTAAGC TTTGTAGTTAAGCAA torD 2020228 - 2019629 - | chaperone protein TorD torA 2022711 - 2020228 - | trimethylamine-N-oxide reductase precursor TERM 3355 2021924 - 2021942 + g 82 -3.2 -5.4505 | TTGCTTTTCACCGGA TCAATG CTAATCA CATTGA TTTTTTGTTCCGCCA TERM 3356 2022146 - 2022131 - G 70 -7.6 -3.70553 | GAACCTAACACATAA GGCAAA ATGG TTTGCC CCGCACCGGTGGAGT torC 2023341 - 2022721 - | pentahemic c-type cytochrome glyQ 2023532 - 2024437 + | glycyl-tRNA synthetase subunit alpha APL_1801 2024484 - 2024867 + | hypothetical protein TERM 3357 2025298 - 2025264 - f 70 -7 -3.86822 | TAATTTCTGCACAAA CCCAGTCCCCCTCTTT AGC AAAGAGGGGTTAGGGG AGATTTGGCAGAAGT APL_1802 2025340 - 2025744 + | hypothetical protein TERM 3358 2025821 - 2025796 - g 75 -5.3 -4.76193 | AATGACAACACAAAA CTTCCTCGCCG AGAT CGGCACTGAAG AGTTGCCACCGAAGG TERM 3359 2026498 - 2026481 - g 73 -2.6 -5.11112 | overlap 2026452 AAATCGCAAGAAAAA GCGACC GCTTTA GGTGGC GTGGCAGACATCGAA TERM 3360 2026757 - 2026745 - g 74 -4.8 -4.90013 | opp_overlap 2026745 GAAGGTAATGAAAAA GTGG TTCGT CCAC GTTTAACCGATGCGG glyS 2025782 - 2027851 + | glycyl-tRNA synthetase subunit beta TERM 3361 2027886 - 2027863 - f 75 -9.6 -2.73338 | opp_overlap 2027863, overlap 2027849 2027862 2027865 ATAATTTGTTGAAAT TAGACCGCTT TTTT AGGCGGTCTA TTTTTAAGCGAAATA TERM 3362 2027863 - 2027886 + F 100 -11.8 -4.57073 | opp_overlap 2027849 2027863 2027862 2027865 ATAATTTGTTGAAAT TAGACCGCTT TTTT AGGCGGTCTA TTTTTAAGCGAAATA TERM 3363 2028063 - 2028047 - g 70 -7.3 -3.76393 | opp_overlap 2028047 2028045 AGAGGGTAATGTAAA CCATTTC TTT GAAACGG TATTTATTACTTTAG APL_1804 2027967 - 2028257 + | hypothetical protein TERM 3364 2028264 - 2028307 + G 100 -12.6 -4.64383 | opp_overlap 2028263 2028267 TTGGCGTAATTGAAT CAAGCGGTTGTTTTTGCAAA AAAT TTTGCAAATTTGACCGCTTG TTTTCCTTTCTCGTT xerC 2028258 - 2029268 + | site-specific tyrosine recombinase XerC APL_1806 2029661 - 2029272 - | hypothetical protein TERM 3365 2029585 - 2029575 - G 71 -2.4 -5.24551 | overlap 2029576 CGAAAGCAATAAAAA CGGC GTA GTCG GTAAGCCCGGCAGAA TERM 3366 2029700 - 2029716 + r 76 -6.5 -4.64598 | opp_overlap 2029699 2029702 CTCAATTAGAGATAT TAGACGG ATT CCGCCTA TTTTTCAACTAATTC APL_1807 2030471 - 2029725 - | hypothetical protein TERM 3367 2030337 - 2030347 + g 70 -5.4 -4.41206 | GTTTTTCGGCATTGA TTCG ACA CGAA TTTTATGCGGTACTT lpxH 2031244 - 2030513 - | UDP-2,3-diacylglucosamine hydrolase TERM 3368 2031265 - 2031230 - G 100 -9.2 -5.4505 | gap 1 GCTCGCAATAAAAAA CGGTTCAAT-TTGCAAA ATT CTAGCAAAATTGAACCG CTTGGAATAGCTTAT APL_1809 2031801 - 2031277 - | hypothetical protein TERM 3369 2031684 - 2031704 + g 70 -7.5 -3.794 | CCATACGGCGAACTT CCATACCGG TCA CCGTTGTGG TTTCATAGCTTGGCA APL_1810 2032624 - 2031836 - | putative Mg-dependent DNAse TERM 3370 2032055 - 2032069 + g 72 -10 -2.82516 | opp_overlap 2032047 2032044 CACATCACGCAATTC TTCCGC ATT GCGGAA TGTGATAATCCCCGA TERM 3371 2032521 - 2032508 - G 76 -6.7 -4.54343 | ACAAATCGAAATAAA GTGGT GTAC ACCAC GCGCTTTAGCATTTT TERM 3372 2032705 - 2032694 - H 70 -4.4 -4.6645 | GAGATATATAGAAAA GAGA TTTA TCTC TAAAAGGCAAATGTA APL_1811 2033633 - 2034265 + | hypothetical protein TERM 3373 2034304 - 2034273 - T 88 -7.4 -4.91473 | opp_overlap 2034273 GAAGTTAAAAATAAA GCCATAACAGAC TCAAAAAT GTCCATTATGGC TATATCATGGGGAAA TERM 3374 2034607 - 2034619 + T 72 -2.7 -5.27335 | ATTCAATTAGAAACT GATGT AGT ATATC TTTTTCTTTGGCGCC TERM 3375 2036102 - 2036089 - T 72 -8.1 -3.35775 | overlap 2036087 ATCATTGCTCAAAGA GGCGA TATT TCGCC CTCGAAACCAATATT macA 2037310 - 2036534 - | macrolide-specific efflux protein APL_1815 2038382 - 2037606 - | hypothetical protein TERM 3376 2038112 - 2038102 - G 73 -5.4 -4.74103 | CCTTTAATTGAAAAA CCAT CAA ATGG GTTAACAAACAGTGA holB 2039696 - 2038713 - | DNA polymerase III subunit delta' TERM 3377 2039642 - 2039619 - G 83 -9.6 -3.90922 | gap 1, overlap 2039621 ATCGGTTTTAAATAA CA-GGGCGTGA TGA CCACGCCCATG CAAAAAGGATTCTGT TERM 3378 2039639 - 2039621 - G 100 -12.4 -3.54488 | overlap 2039619 CGGTTTTAAATAACA GGGCGTGA TGA CCACGCCC ATGCAAAAAGGATTC tdk 2040325 - 2039699 - | thymidylate kinase APL_1818 2041363 - 2040329 - | hypothetical protein TERM 3379 2040783 - 2040796 + g 79 -3.1 -5.28166 | GCACGATTTTGCCAA GCGTT ATCC AATGC TTTTTGTTGCTTTTG TERM 3380 2040924 - 2040934 + g 71 -6.8 -4.19506 | opp_overlap 2040918 AGCAATTGAGCGATT TCCG CTT CGGA TTTTCCGGTTAGCGT TERM 3381 2041952 - 2041929 - R 100 -11.8 -5.24531 | opp_overlap 2041927 2041929 2041932 ATTCGGGATAAAAAA TAAGGCGGTT AATA AACCGCCTCA TCTTTGAAATTATGC TERM 3382 2041929 - 2041952 + r 81 -9.6 -3.4268 | opp_overlap 2041929, overlap 2041927 2041932 ATTCGGGATAAAAAA TAAGGCGGTT AATA AACCGCCTCA TCTTTGAAATTATGC TERM 3383 2041932 - 2041949 + r 83 -11.3 -2.86011 | opp_overlap 2041929, overlap 2041929 2041927 CGGGATAAAAAATAA GGCGGTT AATA AACCGCC TCATCTTTGAAATTA acpP 2042195 - 2041962 - | acyl carrier protein rpe 2043133 - 2042459 - | ribulose-phosphate 3-epimerase TERM 3384 2042568 - 2042583 + g 70 -5.4 -4.56775 | overlap 2042554 CCTGCGGCGGCAATC TCGGCA ATGT TGTCGA TTTTTACGCCGCCGT rpmE2 2043355 - 2043624 + | 50S ribosomal protein L31 type B TERM 3385 2043678 - 2043663 - g 70 -3.9 -4.78764 | overlap 2043664 TAAACTCATTAAAAA CGGCG AAAACA CGCCA TCCGGATTGCCAAAT rpmJ 2043638 - 2043763 + | 50S ribosomal protein L36 TERM 3386 2043819 - 2043792 - T 100 -12.2 -5.30616 | opp_overlap 2043792 TCACTTAAATAAAAA CGCATATTCAAC CATC ATTGAATATGCG TTTTTTGATCCGCGT TERM 3387 2043792 - 2043819 + T 100 -11.5 -5.14965 | opp_overlap 2043792 TCACTTAAATAAAAA CGCATATTCAA CCATCA TTGAATATGCG TTTTTTGATCCGCGT pbpB 2046270 - 2043868 - | penicillin-binding protein 1B (PBP1b) TERM 3388 2046001 - 2045969 - G 73 -8.3 -3.60792 | TTTTCAATTTTGAAA TCGCCCGGCGTCGCA ATT TGAGAAACCTGGCGA TAACCGTTATCCAAT menB 2047206 - 2046349 - | naphthoate synthase TERM 3389 2047262 - 2047243 - R 76 -2.8 -5.43621 | ATAAAGTATAAAAAA TTCGGGCA ATTA TAGCCGAA TTGAGAGGGATTCAC TERM 3390 2047283 - 2047331 + r 100 -13.5 -3.85389 | opp_overlap 2047285, overlap 2047285 2047288 AGGGATTCACGAGAA AATAAGCGGTCAAATTTTGTAAA AAA TTTACAAAAATTCACCGCTTATG TTTAGGTTATTAGGC TERM 3391 2047329 - 2047285 - R 100 -16.1 -4.4767 | opp_overlap 2047285 2047283 2047288 GGATTCACGAGAAAA TAAGCGGTCAAATTTTGTAAA AAA TTTACAAAAATTCACCGCTTA TGTTTAGGTTATTAG TERM 3392 2047285 - 2047329 + r 100 -16.1 -3.50953 | opp_overlap 2047285, overlap 2047283 2047288 GGATTCACGAGAAAA TAAGCGGTCAAATTTTGTAAA AAA TTTACAAAAATTCACCGCTTA TGTTTAGGTTATTAG TERM 3393 2047288 - 2047326 + r 100 -13.4 -3.86975 | opp_overlap 2047285, overlap 2047285 2047283 TTCACGAGAAAATAA GCGGTCAAATTTTGTAAA AAA TTTACAAAAATTCACCGC TTATGTTTAGGTTAT spoT 2049047 - 2047341 - | guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (ppGpp)ase) TERM 3394 2047968 - 2047985 + g 75 -5.5 -4.80882 | overlap 2047969 CAGTTCGACGATGCT ACGCAAC CATT GTTGCGC TTTTTGCTGTACGCT TERM 3395 2047969 - 2047984 + g 73 -9 -3.47806 | overlap 2047968 AGTTCGACGATGCTA CGCAAC CATT GTTGCG CTTTTTGCTGTACGC TERM 3396 2049070 - 2049120 + r 81 -10.8 -2.76404 | opp_overlap 2049072, overlap 2049066 2049086 2049090 CTCGATATAATTAAA AATGGATAATTGCCAATAGATAGT ACT ACTATTTATTTTCAATTATCCATC TAAATTTTGAATAAA TERM 3397 2049118 - 2049072 - R 100 -11.2 -4.96646 | opp_overlap 2049070 2049066 2049086 2049090 CGATATAATTAAAAA TGGATAATTGCCAATAGATAGT ACT ACTATTTATTTTCAATTATCCA TCTAAATTTTGAATA rpoZ 2049425 - 2049150 - | DNA-directed RNA polymerase subunit omega TERM 3398 2049278 - 2049297 + g 75 -5.8 -4.63218 | gap 1 CGATTTCACGTAATG CGAT-AACC GTC GGTTTATCG TTTTCTTCAGGCACA TERM 3399 2049550 - 2049503 - R 87 -11.4 -3.29511 | opp_overlap 2049493 2049543, overlap 2049504 CGTATCTGCTTACAA TGCAAGCGGTTTAATTTGCAAA AAAT TCAGCAAATCAGACCGCTTGCG ATTAGGCGTTGCTGT TERM 3400 2049549 - 2049504 - R 95 -14.9 -2.57564 | opp_overlap 2049493 2049543, overlap 2049503 GTATCTGCTTACAAT GCAAGCGGTTTAATTTGCAAA AAAT TCAGCAAATCAGACCGCTTGC GATTAGGCGTTGCTG recG 2051633 - 2049552 - | ATP-dependent DNA helicase recG TERM 3401 2051410 - 2051396 - G 70 -5.6 -4.37886 | opp_overlap 2051395 2051396 2051407 GCACGGTGGATAAAA TCGGAC GGC GACCGA ATTGTACTTCGGTAA APL_1828 2052122 - 2051757 - | PilT protein-like protein APL_1829 2052472 - 2052185 - | hypothetical protein TERM 3402 2052565 - 2052621 + H 73 -3.7 -5.09259 | opp_overlap 2052584, overlap 2052585 GATTTTCTATATTAA GCGGTCGGATTTAAGAAATTTTTTGCA AAT TGCAAAATTCTGTGAAAATTCGACCGC TTTTGTTTTAAAATA TERM 3403 2052585 - 2052601 + H 72 -8.1 -3.50447 | opp_overlap 2052584, overlap 2052565 CGGATTTAAGAAATT TTTTGCA AAT TGCAAAA TTCTGTGAAAATTCG syp 2052678 - 2054393 + | prolyl-tRNA synthetase TERM 3404 2054416 - 2054443 + T 83 -7 -4.72986 | opp_overlap 2054417, overlap 2054417 AAAATAGATGAAAAA AGACCGCTTG CCTTAAAA CAAGCGGTCG TTTTTCATAGGAATG TERM 3405 2054442 - 2054417 - T 100 -11.9 -5.28755 | opp_overlap 2054416 2054417 AAATAGATGAAAAAA GACCGCTTGCC TTAA AACAAGCGGTC GTTTTTCATAGGAAT TERM 3406 2054417 - 2054442 + T 85 -10.5 -3.4331 | opp_overlap 2054417, overlap 2054416 AAATAGATGAAAAAA GACCGCTTG CCTTAAAA CAAGCGGTC GTTTTTCATAGGAAT APL_1831 2055231 - 2054650 - | RNA polymerase sigma factor APL_1832 2055320 - 2056276 + | putative sulfite oxidase subunit YedY TERM 3407 2056387 - 2056367 - g 80 -9.8 -3.58343 | GCGACGACCCGGAAA TACTCGGA GCCGA TCCGAGTA AAGATTTAATTCACT APL_1833 2056276 - 2056869 + | putative sulfite oxidase subunit YedZ TERM 3408 2056914 - 2056963 + T 100 -16.1 -5.03314 | opp_overlap 2056917, overlap 2056917 TTTAGTCAGCATAAA AAATAAGCGGTCATTTTTACTAA AAAT TCGGTAAAAATGACCGCTTATTA TTTTTTCAAAATCAA TERM 3409 2056917 - 2056960 + T 100 -17.8 -4.62085 | opp_overlap 2056917, overlap 2056914 AGTCAGCATAAAAAA TAAGCGGTCATTTTTACTAA AAAT TCGGTAAAAATGACCGCTTA TTATTTTTTCAAAAT TERM 3410 2056960 - 2056917 - T 100 -17.8 -5.31877 | opp_overlap 2056917 2056914 AGTCAGCATAAAAAA TAAGCGGTCATTTTTACTAA AAAT TCGGTAAAAATGACCGCTTA TTATTTTTTCAAAAT rpoH 2057930 - 2056980 - | RNA polymerase factor sigma-32 glpT 2059236 - 2058079 - | glycerol-3-phosphate transporter TERM 3411 2058974 - 2058986 + g 71 -4.7 -4.66318 | overlap 2058975 TTCCAACCTGCGATA GCCGC CCC GCGGG TTTTGTTCGGGTAAT TERM 3412 2059573 - 2059529 - H 81 -10.9 -2.64878 | opp_overlap 2059533, overlap 2059525 2059533 2059542 CCACAAATTAATTGA GCAAGCGGTTAAATTTACAAA TTT TTTGCAAAACCAACCGCTTTC CATTAGAATTATAAG TERM 3413 2059569 - 2059533 - H 83 -10.3 -3.24 | opp_overlap 2059533, overlap 2059529 2059525 2059542 AAATTAATTGAGCAA GCGGTTAAATTTACAAA TTT TTTGCAAAACCAACCGC TTTCCATTAGAATTA TERM 3414 2059696 - 2059681 - H 77 -3.2 -5.49809 | overlap 2059683 CAAACCGCAAAAAAA TAGTCG CAAA CGACGA ACAATACGCTTTAGC TERM 3415 2059694 - 2059683 - H 72 -5.8 -4.36993 | overlap 2059681 AACCGCAAAAAAATA GTCG CAAA CGAC GAACAATACGCTTTA APL_1836 2059991 - 2060503 + | hypothetical protein TERM 3416 2060593 - 2060609 + T 70 -3.6 -5.02074 | opp_overlap 2060594, overlap 2060594 GCTTTGTATCATGAT ACGGGA AAATA TCCCGA TTTTTTAGGACATGC TERM 3417 2060977 - 2061002 + T 73 -7.5 -3.88182 | opp_overlap 2060977, overlap 2060973 CCCTCCATAAGAAAA GAGCCGAATAC ACTG GCAATCGGCTC TTAATTTTTAGTTAC TERM 3418 2061002 - 2060977 - T 100 -9.7 -4.77165 | opp_overlap 2060977 2060973 CCCTCCATAAGAAAA GAGCCGAATAC ACTG GCAATCGGCTC TTAATTTTTAGTTAC asnA 2062006 - 2061014 - | asparagine synthetase AsnA TERM 3419 2061362 - 2061378 + g 70 -9.4 -2.75844 | overlap 2061361 GTCATCATAGTCCGG CGCACG TCCGT CGTGCG GTTTACCGTCGGACA TERM 3420 2061557 - 2061546 - G 73 -5.8 -4.43681 | GACGGAATATCAAAA CGTG CTTC CACG GCTAATTCGGTTAAA TERM 3421 2062118 - 2062132 + H 79 -3.6 -5.48063 | AAAAATCTTTTTCTA TTGGAT TTT ATCTAA TTTTTTGTGTTAAAT TERM 3422 2062601 - 2062570 - g 74 -4.5 -4.83615 | overlap 2062597 TATTGGCGACAAAAA TTCAGCTGATTGA TGAAAT TCAATCTACCGAA ACCTTAATTTCGATG asnC 2062188 - 2062649 + | DNA-binding transcriptional regulator AsnC udp 2062838 - 2063602 + | uridine phosphorylase TERM 3423 2063623 - 2063659 + F 89 -6.6 -5.59879 | opp_overlap 2063623 TAAAGTTCACAACAA GCGGTCGGATTGTTAA AATAC TTTGCAATCTCACCGC TTTTTTATGTTTATG ubiC 2063672 - 2064148 + | 4-hydroxybenzoate synthetase (chorismate lyase) murI 2064220 - 2065017 + | glutamate racemase TERM 3424 2065150 - 2065195 + T 80 -2.6 -5.72254 | gap 1, overlap 2065153 ATAATGCATCCCACA CAACGACGCACTGTTGTGAAC GAGAA GTAAATG-CAGTGCGTCGTTC TTTTTTGTTCTTTAA TERM 3425 2065153 - 2065192 + T 73 -4.3 -4.86954 | gap 1, overlap 2065150 ATGCATCCCACACAA CGACGCACTGTTGTGAAC GAGAA GTAAATG-CAGTGCGTCG TTCTTTTTTGTTCTT TERM 3426 2067187 - 2067204 + T 74 -9.1 -3.07291 | opp_overlap 2067187 GTCGTAACAAGGTAA CCGTAGG GGAA CCTGCGG TTGGATCACCTCCTT TERM 3427 2068163 - 2068151 - T 72 -6.2 -4.31549 | GAAAAGCGAAAAGAA CCCC GGTGA GGGG AGTGAAATAGAACCT TERM 3428 2068958 - 2068944 - T 71 -5.7 -4.58213 | TAAGTAACGATAAAA CGAGT GAAAA ACTCG TTCGCCGGAAGACCA TERM 3429 2070663 - 2070637 - T 74 -2.2 -5.57729 | AAAGAAGACAAAAAA CGAAAAAATCAG TGA CGGCTTGTTTCG AATTTAAGAAGAAAA TERM 3430 2070871 - 2070896 + T 100 -10.5 -5.10154 | opp_overlap 2070871 GAGAGGCGAAGGGAA CCCTGTGGTTA GCGA TAACTACGGGG TTTTTGCTTTTGAGT TERM 3431 2071355 - 2071322 - T 100 -9.7 -5.626 | opp_overlap 2071324 2071352, overlap 2071352 TACGGCATAAAAAAA GCGGTCAATCTGC CCTACTTT ACAGATTAACCGC AAGGTGGTGTGTTAT cysI 2073147 - 2071381 - | sulfite reductase subunit beta TERM 3432 2071830 - 2071845 + g 79 -7.6 -4.27796 | opp_overlap 2071821 2071828 2071826 2071830 AGGAAACACAAGACA TTGCGT TTTC ACGCAA TTTTGAAATTTCTTG TERM 3433 2073089 - 2073105 + g 73 -3.7 -5.07486 | overlap 2073090 TCAGTTTTTAAACGC TCGTTGT CAG ATAACGG TTTTTCTTGCCACTC TERM 3434 2073188 - 2073198 + r 79 -5.4 -5.08601 | opp_overlap 2073183 2073188 TTTTAATAAACATCA CGTT GAT AACG TTTTTCTTCACGTAA cysJ 2074986 - 2073175 - | sulfite reductase [NADPH] flavoprotein alpha-component (SIR-FP) TERM 3435 2075230 - 2075268 + r 93 -10.4 -3.96068 | opp_overlap 2075230 AAAGTGCATAAAAAA GCGGTCTAAATTTGCAAA AAA TTAACAAATTTTGACCGC TTGTTCTTAAGGTGA TERM 3436 2075268 - 2075230 - R 100 -12.6 -5.28826 | opp_overlap 2075230 AAAGTGCATAAAAAA GCGGTCTAAATTTGCAAA AAA TTAACAAATTTTGACCGC TTGTTCTTAAGGTGA cysN 2076018 - 2075287 - | sulphate adenylate transferase subunit 1 TERM 3437 2076638 - 2076616 - g 93 -12 -3.71848 | opp_overlap 2076632, overlap 2076632 CGCCTTTATCAACAA GTGCCGGTAT TAG ATACCGGCGC GAGAGGCGCGACGAT sbp 2076271 - 2077065 + | sulfate-binding protein precursor cysT 2077084 - 2077896 + | Sulfate transport system permease protein cysT cysW 2077909 - 2078721 + | Sulfate transport system permease protein cysW cysA 2078734 - 2079804 + | Sulfate/thiosulfate import ATP-binding protein cysA TERM 3438 2079870 - 2079833 - T 77 -8.6 -3.67967 | opp_overlap 2079833 TAGATATAGAGATAA GCGGTTAATTTTGC CTAAAAGTTT GCAAATTTAACCGC TTTCTTATATTGAGA TERM 3439 2079833 - 2079870 + T 89 -8.6 -4.46073 | opp_overlap 2079833 TAGATATAGAGATAA GCGGTTAATTTTGC CTAAAAGTTT GCAAATTTAACCGC TTTCTTATATTGAGA TERM 3440 2079913 - 2079939 + T 70 -2.3 -5.30155 | gap 1, opp_overlap 2079913 2079909 2079914, overlap 2079913 2079914 GCTTGCTTAAATCAA CCAGTG-CATCA CGGG TGATGTCGCTGA TTTTTTGGTTGCTGG lldD 2081038 - 2079893 - | L-lactate dehydrogenase TERM 3441 2079965 - 2079975 + g 73 -5.4 -4.67607 | GCTGGTAAGGGTCAT TGCA ACG TGCA TTTCTTTCTTGAAAA TERM 3442 2081202 - 2081172 - R 100 -14.2 -5.07011 | opp_overlap 2081172, overlap 2081201 CACAGAAATGAAAAA GCTCTCTTTGCTTT ATA AAAGTAAAGAGAGC TTATGAAAGCAAGCG TERM 3443 2081172 - 2081202 + r 100 -16.4 -3.28712 | opp_overlap 2081172 2081201 CACAGAAATGAAAAA GCTCTCTTTGCTTT ATA AAAGTAAAGAGAGC TTATGAAAGCAAGCG birA 2081984 - 2081220 - | bifunctional biotin operon repressor/biotin synthetase BirA TERM 3444 2081882 - 2081856 - G 71 -8.8 -3.34398 | opp_overlap 2081856 2081863, overlap 2081854 TTGCTCCGCCAAACA TACCGAACCTTG TGG CAAGGTTTGATA GTGTTTAAGCAAATA TERM 3445 2081863 - 2081875 + g 72 -7.7 -3.86835 | opp_overlap 2081856 2081854, overlap 2081856 GCCAAACATACCGAA CCTTG TGG CAAGG TTTGATAGTGTTTAA murB 2083027 - 2081993 - | UDP-N-acetylenolpyruvoylglucosamine reductase TERM 3446 2083113 - 2083152 + r 81 -9.4 -3.84451 | opp_overlap 2083117, overlap 2083120 TTAAAATGGAACAAA AAAATAACCCTCTTGCTT AAAT AAGCAAGAGGGTTACTAA TTTAACTTTAGAAAA TERM 3447 2083148 - 2083117 - R 100 -19 -5.83226 | opp_overlap 2083113 2083120 AATGGAACAAAAAAA TAACCCTCTTGCTT AAAT AAGCAAGAGGGTTA CTAATTTAACTTTAG TERM 3448 2083120 - 2083145 + r 100 -16.3 -3.33885 | opp_overlap 2083117, overlap 2083113 GGAACAAAAAAATAA CCCTCTTGCTT AAAT AAGCAAGAGGG TTACTAATTTAACTT ompA 2084271 - 2083177 - | Outer membrane protein P5 precursor (OMP P5) TERM 3449 2084091 - 2084106 + g 79 -7.6 -4.3739 | opp_overlap 2084090 2084093, overlap 2084075 CGTAAGTTACTGAAT TACGGT TGAT ACCGTA TTTTGTACCGCGATC TERM 3450 2084611 - 2084652 + r 73 -4.5 -4.87893 | opp_overlap 2084621, overlap 2084616 2084621 CGGTAAGCGGCTTGA ATAACAAAAAGCCCACTTC TTGC GAAGTAGGCTTTTGATTAA TTTTTAATTAACCTT TERM 3451 2084642 - 2084621 - R 100 -10.9 -5.29445 | opp_overlap 2084616 2084611 2084621 CTTGAATAACAAAAA GCCCACTTC TTGC GAAGTAGGC TTTTGATTAATTTTT TERM 3452 2084621 - 2084642 + r 89 -8.7 -4.56636 | opp_overlap 2084621, overlap 2084616 2084611 CTTGAATAACAAAAA GCCCACTTC TTGC GAAGTAGGC TTTTGATTAATTTTT ilvC 2086141 - 2084660 - | ketol-acid reductoisomerase TERM 3453 2086059 - 2086044 - G 76 -7.6 -4.15044 | TTGCCTTTTAAGAAA TTGCAG CCGT CTGCAA ACTCGTTACGATCCA TERM 3454 2087042 - 2087060 + G 73 -8.9 -3.55444 | opp_overlap 2087041 2087050 CCTGCGAATATACAT TCGACGA ACAAA TCGTCGA TTTAAAAGGTCGCCG pqiA 2086378 - 2087619 + | hypothetical protein TERM 3455 2087622 - 2087677 + F 80 -7.2 -4.52873 | gap 1, overlap 2087625 GAAAAAAGGCTAAAA CAAGCGGTC-GGATTTTGTTGAATTTT TGC AAATTTTAATGAAATTCTGACCGCTTA TTGTTTTTGTAGAAA TERM 3456 2087625 - 2087674 + F 89 -8.9 -4.36508 | gap 1, overlap 2087622 AAAAGGCTAAAACAA GCGGTC-GGATTTTGTTGAATTTT TGC AAATTTTAATGAAATTCTGACCGC TTATTGTTTTTGTAG APL_1855 2087796 - 2088896 + | hypothetical protein TERM 3457 2088913 - 2088941 + GF 100 -16.8 -3.45768 | overlap 2088908 CGCTTTTTTGCCTCG CTTACCGCTGCG CTGGT CGCGGCGGTAAG TTCTACGTTATGCTG APL_1856 2088868 - 2089221 + | hypothetical protein merP 2089218 - 2089532 + | MerP TERM 3458 2089538 - 2089558 + T 100 -15.5 -3.41051 | overlap 2089544 2089546 GCAGATTTAGGTTTT CCACGTACG AGC CGTACGTGG TTATGATCAGCCTGC TERM 3459 2089546 - 2089599 + T 86 -12.5 -2.85361 | gap 1, overlap 2089538 2089544 AGGTTTTCCACGTAC GAGCCGTA-CGTGGTTATGATCAGCC TGC GGCTGAGTTGAGCCACGCTATGGCTC TGAGTTTTTCACTAC APL_1858 2090005 - 2089760 - | hypothetical protein APL_1859 2090944 - 2090045 - | NADH-dependent butanol dehydrogenase 1 TERM 3460 2090769 - 2090785 + g 70 -7.3 -3.74693 | ATATAAGCGATACCG GCGTTAT CTA ATGACGC TTTAATACGATCCAA lysR 2091060 - 2091962 + | LysR protein dapD 2092166 - 2092990 + | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase TERM 3461 2093003 - 2093027 + F 95 -8.5 -5.43866 | overlap 2093004 TAATTAAATCCTTCT GCCCCCTCCTT GCA AAAGAGGGGGA TTTTTTTACCGCTTG TERM 3462 2093004 - 2093026 + F 91 -12 -3.85235 | overlap 2093003 AATTAAATCCTTCTG CCCCCTCCTT GCA AAAGAGGGGG ATTTTTTTACCGCTT TERM 3463 2093131 - 2093106 - g 80 -9.7 -3.66646 | opp_overlap 2093106, overlap 2093107 AATATGTTAGGTAAA CGCGAACCGCA TATT TACGGCTCGCA GACCCTCTCAGATAT TERM 3464 2093130 - 2093107 - g 77 -11 -2.79505 | opp_overlap 2093106, overlap 2093106 ATATGTTAGGTAAAC GCGAACCGCA TATT TACGGCTCGC AGACCCTCTCAGATA aroQ 2093055 - 2093519 + | 3-dehydroquinate dehydratase APL_1863 2093512 - 2094300 + | glycosyltransferase TERM 3465 2094336 - 2094389 + F 75 -9.9 -2.62263 | gap 1, opp_overlap 2094342 TGAGTCGCAAATTCC CGATAATTTCGCCAATTTTGC-AAGA TTT TATTCGCAAAATTGGCGAAATTGGAG TAATCTAGGCAAGAT TERM 3466 2094383 - 2094342 - f 100 -16.3 -3.32294 | gap 1, opp_overlap 2094336 GCAAATTCCCGATAA TTTCGCCAATTTTGCAAGAT TTT AT-TCGCAAAATTGGCGAAA TTGGAGTAATCTAGG TERM 3467 2094410 - 2094431 + F 83 -7.3 -4.66347 | TAGGCAAGATTTTTA CTCTGCATA ATGT TGTGCGGAG TTTCTCTTTTTTAAT accB 2094471 - 2095010 + | biotin carboxyl carrier protein of acetyl-CoA carboxylase (BCCP) TERM 3468 2095113 - 2095099 - g 71 -4.2 -4.87786 | CCAATGTTAGAAAAA GTTGTC ATT GCCAAC CGCGGCGAGATCGCA accC 2095087 - 2096430 + | acetyl-CoA carboxylase biotin carboxylase subunit TERM 3469 2096466 - 2096438 - T 100 -14.8 -3.93237 | opp_overlap 2096438 TTAAATAAGCAACAA GCGGTAAGATTT TCAGT AAATCTTACCGC TTTCTTTTAGCTTTT TERM 3470 2096438 - 2096466 + T 100 -14.8 -4.75954 | opp_overlap 2096438 TTAAATAAGCAACAA GCGGTAAGATTT TCAGT AAATCTTACCGC TTTCTTTTAGCTTTT mobAB 2097564 - 2096473 - | MobAB fusion protein APL_1867 2097651 - 2097920 + | hypothetical protein TERM 3471 2098321 - 2098304 - g 78 -4.1 -5.08367 | gap 1 AAGATAAAGTAAAAA CCGCACTC TTT GAA-GCGG CGCAAAAAGATGCAA TERM 3472 2098476 - 2098488 + G 71 -4.7 -4.72272 | AAATTTTAAAATTCG CGGCG TAC CGGCG TTTTTCGTAAACGGA dsbA 2097964 - 2098602 + | Thiol:disulfide interchange protein dsbA precursor TERM 3473 2098666 - 2098703 + T 84 -5.8 -5.27335 | gap 1, overlap 2098667 CCAAGTGGACAAAGT G-GTGGCTAAATAGTAT TTTTT ATTTTATTTAGCCACTC TTTTTATTTAAAAAA TERM 3474 2098667 - 2098701 + T 89 -9.5 -4.27026 | overlap 2098666 CAAGTGGACAAAGTG GTGGCTAAATAGTAT TTTTT ATTTTATTTAGCCAC TCTTTTTATTTAAAA APL_1869 2099300 - 2098821 - | hypothetical protein TERM 3475 2099060 - 2099072 + g 70 -7.7 -3.73271 | overlap 2099056 TCGTTTTTAATTCTC TCCCA GCG TGGGA TTGATGTTTTTTTCT TERM 3476 2099638 - 2099674 + r 100 -16.8 -4.57341 | opp_overlap 2099638 TCATATTTCAAAAAA GTGGGTTAAGGCCTTG CACTA TAAGGCTTTAACCCAC TTTTTAGCAACCATT TERM 3477 2099674 - 2099638 - R 100 -13.9 -5.07567 | opp_overlap 2099638 TCATATTTCAAAAAA GTGGGTTAAGGCCTT GCACTAT AAGGCTTTAACCCAC TTTTTAGCAACCATT TERM 3478 2099754 - 2099721 - R 86 -10.5 -3.55801 | gap 1, opp_overlap 2099726, overlap 2099712 2099726 ATTAAGTCTCTTAAA GAAAAGGCTCGA-TCA TTA TGATTCGAGCCTTTTT GCTTATTATGCGTAA TERM 3479 2099749 - 2099726 - R 100 -10.4 -4.86731 | gap 1, opp_overlap 2099726, overlap 2099721 GTCTCTTAAAGAAAA GGCTCGA-TCA TTA TGATTCGAGCC TTTTTGCTTATTATG TERM 3480 2099726 - 2099749 + r 100 -10.4 -5.01845 | gap 1, opp_overlap 2099726 2099721 GTCTCTTAAAGAAAA GGCTCGA-TCA TTA TGATTCGAGCC TTTTTGCTTATTATG APL_1870 2100700 - 2099777 - | hypothetical protein TERM 3481 2100207 - 2100226 + g 95 -7.8 -5.00616 | overlap 2100219 TCTTCCGCTAATTTT GCCGCC TTTTGCTC GGCGGC TTTTTTAGCGGCCAA APL_1871 2101567 - 2100812 - | hypothetical protein APL_1872 2102253 - 2101585 - | putative D-alanyl-D-alanine carboxypeptidase dapE 2103405 - 2102272 - | succinyl-diaminopimelate desuccinylase arsC 2103778 - 2103428 - | ArsC protein TERM 3482 2104430 - 2104416 - g 73 -5.6 -4.46267 | ATAAGGCAACGAAAA CGGCAA AGT CCGCCG CAAAGAAAGCTACAG TERM 3483 2104534 - 2104520 - g 73 -3.6 -5.07486 | opp_overlap 2104524, overlap 2104524 GAGGCGGAAGAAAAA GACATA CCG TATATC GGCGGTATTAATGAA APL_1875 2103986 - 2104696 + | hypothetical protein TERM 3484 2104737 - 2104712 - T 100 -11.3 -5.49234 | opp_overlap 2104712 ATACGTAACAAAAAA GAGATGTGAAT ATTA ACTCACATCTC TTTTTTTATTTATTC TERM 3485 2104712 - 2104737 + T 100 -9.1 -6.08342 | opp_overlap 2104712 ATACGTAACAAAAAA GAGATGTGAAT ATTA ACTCACATCTC TTTTTTTATTTATTC folP 2105592 - 2104747 - | dihydropteroate synthase rluC 2106619 - 2105654 - | 23S rRNA pseudouridylate synthase C TERM 3486 2107827 - 2107844 + H 73 -8.5 -3.30124 | CAACGTTCTTGGCTT GCTAACT AGTG AGTTAGC TTATCCGAAATAACC TERM 3487 2109264 - 2109252 - H 73 -4.1 -4.87803 | overlap 2109256 TACTGGCAAATAAAA TCACC ACC GATGA TGAAAACTATTACCA TERM 3488 2109428 - 2109388 - H 100 -15.9 -2.77899 | opp_overlap 2109388, overlap 2109391 GTGCCGTACTAATTA TAATTCCATTGTATTAATT CAT ATTTAATACAATGGAATTA TTTCTTTCCAGCCTC TERM 3489 2109388 - 2109428 + H 100 -15.9 -4.42062 | opp_overlap 2109388 2109391 GTGCCGTACTAATTA TAATTCCATTGTATTAATT CAT ATTTAATACAATGGAATTA TTTCTTTCCAGCCTC TERM 3490 2109425 - 2109391 - H 95 -13.2 -3.54029 | opp_overlap 2109388, overlap 2109388 CCGTACTAATTATAA TTCCATTGTATTAATT CAT ATTTAATACAATGGAA TTATTTCTTTCCAGC TERM 3491 2110034 - 2110016 - g 70 -3.9 -4.77165 | gap 1 CCGGCGATAACAAAA CCGTATTG ATTC CAA-ACGG CAAAGTGTTCTCAGA mscS 2109487 - 2110398 + | small-conductance mechanosensitive channel TERM 3492 2110464 - 2110418 - f 81 -8 -4.18674 | opp_overlap 2110421, overlap 2110420 2110421 TTGAGACATAAATAA CAGGCGGTAGGTTTTTTGGTAA ATT TTACCAAGAATCCGACCGCTTT TTTGTTGTCCGGAAA TERM 3493 2110462 - 2110420 - f 86 -10.6 -3.68348 | opp_overlap 2110421, overlap 2110418 2110421 GAGACATAAATAACA GGCGGTAGGTTTTTTGGTAA ATT TTACCAAGAATCCGACCGCT TTTTTGTTGTCCGGA TERM 3494 2110421 - 2110461 + F 100 -16.3 -5.55769 | opp_overlap 2110420 2110418 2110421 AGACATAAATAACAG GCGGTAGGTTTTTTGGTAA ATT TTACCAAGAATCCGACCGC TTTTTTGTTGTCCGG TERM 3495 2110461 - 2110421 - f 93 -14.1 -2.79925 | opp_overlap 2110421, overlap 2110420 2110418 AGACATAAATAACAG GCGGTAGGTTTTTTGGTAA ATT TTACCAAGAATCCGACCGC TTTTTTGTTGTCCGG TERM 3496 2111430 - 2111415 - g 88 -3.2 -5.75342 | CCGTGTGAAAAAAAA CGGTGA ATTA TTACCG CTTGAAATCAACTGT TERM 3497 2111449 - 2111459 + G 73 -8.2 -3.57971 | overlap 2111446 GAAATCAACTGTCGT CCGC CGG GCGG TTTAACCATCGATAT APL_1881 2110594 - 2111772 + | hypothetical protein APL_1882 2111784 - 2112536 + | hypothetical protein ptrA 2115552 - 2112604 - | protease 3 precursor recC 2118905 - 2115561 - | exodeoxyribonuclease V gamma chain TERM 3498 2116823 - 2116839 + g 84 -11.5 -3.1585 | overlap 2116822 CTCGTCTGGCTCGGT CGCCTCG TTT CGGGGCG TATTGCATTAAGTCA TERM 3499 2117265 - 2117250 - G 71 -4.6 -4.58685 | overlap 2117252 AAATTTTGCCAAAAA GCCGAC TAAT GTCGCC GATAAACCGTAACTC TERM 3500 2118973 - 2118985 + r 77 -4.8 -5.19916 | ATCTCTTTCCTTTGC CGAC AAGCG GTCG TTTTTTCCGTATTTT TERM 3501 2119039 - 2119024 - R 89 -9 -4.44608 | opp_overlap 2119028, overlap 2119021 TTCACTCAAAAATAA CCGCTT GCCC AAGCGG GAAATTGACTTGAAT APL_1885 2119306 - 2119010 - | hypothetical protein APL_1886 2119952 - 2119296 - | hypothetical protein pulJ 2120495 - 2119962 - | hypothetical protein pulG 2121150 - 2120620 - | hypothetical protein TERM 3502 2121182 - 2121148 - G 77 -4.5 -5.03747 | gap 1, opp_overlap 2121153 2121155, overlap 2121153 AAAGGCTTTAAAAAA CATAATAGTATTCTCC CGAA GAAGAATACTATTG-G ATAAGCGGTATAAAT TERM 3503 2121178 - 2121153 - R 93 -9.9 -4.18465 | opp_overlap 2121153 2121155, overlap 2121148 CTTTAAAAAACATAA TAGTATTCTCC CGAA GAAGAATACTA TTGGATAAGCGGTAT fabA 2121768 - 2121238 - | 3-hydroxydecanoyl-(acyl carrier protein) dehydratase TERM 3504 2121839 - 2121797 - R 84 -3.7 -5.76237 | gap 3 TAGACAAACAAAAAA GCCCGTACTATCAGGGCTTC CAATTT GAAGC---GATAGTACAGGC TTTTAAATTAGCGAA lonH 2123516 - 2121879 - | putative protease La-like protein TERM 3505 2122052 - 2122037 - G 71 -4.8 -4.63218 | GTTGCTTTAATAAAA TTTGAA TCGC TTCAAA AACATTATTAACCGC TERM 3506 2122192 - 2122207 + g 74 -6.2 -4.5442 | opp_overlap 2122190 2122192 CTCGCCTCGCAAATA TTGAAG AAGC CTTCAA TTTTCTGATTCACAC APL_1891 2123601 - 2124047 + | hypothetical protein TERM 3507 2124073 - 2124109 + T 85 -8.9 -4.16921 | opp_overlap 2124078, overlap 2124078 2124107 TTCGCGAAAATCTAC AAAAATGCCCTTGTA TCTCACT TACAGGGGCATTTTC TTTTAAGAATTATTG TERM 3508 2124078 - 2124104 + T 95 -8.8 -5.08255 | opp_overlap 2124078, overlap 2124073 GAAAATCTACAAAAA TGCCCTTGTA TCTCACT TACAGGGGCA TTTTCTTTTAAGAAT TERM 3509 2124104 - 2124078 - T 83 -6.6 -4.97402 | opp_overlap 2124078 2124073 GAAAATCTACAAAAA TGCCCTTGTA TCTCACT TACAGGGGCA TTTTCTTTTAAGAAT trpS 2124982 - 2124119 - | tryptophanyl-tRNA synthetase TERM 3510 2124146 - 2124159 + g 81 -5.3 -5.1356 | opp_overlap 2124144 ACCAACTAATTTATA CACTT CATC AAGTG TTTTTCTTGCTCGAA TERM 3511 2125273 - 2125218 - R 100 -17.2 -3.18044 | opp_overlap 2125218 2125221, overlap 2125221 2125239 CATTCGATAAAAGCA CAAGCGGTCAAATTCCAGAAATTTTT TGCA AAAAACTAAGGGAATTTGACCGCTTG TTATATGTAGAATTA TERM 3512 2125218 - 2125273 + r 100 -15 -3.60412 | opp_overlap 2125218 2125221 2125239, overlap 2125221 CATTCGATAAAAGCA CAAGCGGTCAAATTCCAGAAATTTTT TGCA AAAAACTAAGGGAATTTGACCGCTTG TTATATGTAGAATTA TERM 3513 2125221 - 2125270 + r 93 -10.9 -3.92996 | opp_overlap 2125221 2125218 2125239, overlap 2125218 TCGATAAAAGCACAA GCGGTCAAATTCCAGAAATTTTT TGCA AAAAACTAAGGGAATTTGACCGC TTGTTATATGTAGAA TERM 3514 2125270 - 2125221 - R 95 -13.1 -3.72405 | opp_overlap 2125218 2125221, overlap 2125218 2125239 TCGATAAAAGCACAA GCGGTCAAATTCCAGAAATTTTT TGCA AAAAACTAAGGGAATTTGACCGC TTGTTATATGTAGAA gph 2125951 - 2125286 - | phosphoglycolate phosphatase TERM 3515 2125584 - 2125600 + g 86 -8.7 -4.2704 | overlap 2125585 GCACTTAATACCGGC TCGACCA ATT TGGTCGG TTTATTGGTAATCAC TERM 3516 2125585 - 2125599 + g 74 -10 -3.15742 | overlap 2125584 CACTTAATACCGGCT CGACCA ATT TGGTCG GTTTATTGGTAATCA TERM 3517 2126026 - 2126003 - R 93 -8.2 -5.68438 | opp_overlap 2126003 TTAGCAAATAAAAAA GCCGTAAC AATCGGAG GTTACGGC TTTTTACGTTCTTAT TERM 3518 2126003 - 2126026 + r 86 -8.2 -4.82333 | opp_overlap 2126003 TTAGCAAATAAAAAA GCCGTAAC AATCGGAG GTTACGGC TTTTTACGTTCTTAT APL_1894 2126351 - 2126121 - | hypothetical protein TERM 3519 2126280 - 2126268 - G 70 -7.7 -3.68222 | opp_overlap 2126267, overlap 2126247 CGGCAACGCCAATAA TGCGA CTT TCGCA ATATCATCACACATT TERM 3520 2126454 - 2126503 + r 95 -12.5 -3.59456 | gap 1, opp_overlap 2126454, overlap 2126463 TCGGGCAGCAAAAAA GCGGTTGAATTTCATCGGAAATTT GCA AAATTTCTAACG-AATTCAACCGC TTATCGTTATGCTTT TERM 3521 2126503 - 2126454 - R 100 -14.7 -5.14563 | gap 1, opp_overlap 2126454 2126463 TCGGGCAGCAAAAAA GCGGTTGAATTTCATCGGAAATTT GCA AAATTTCTAACG-AATTCAACCGC TTATCGTTATGCTTT lgt 2127304 - 2126510 - | prolipoprotein diacylglyceryl transferase TERM 3522 2127345 - 2127323 - R 100 -12 -5.40474 | overlap 2127324 ATTCCTTTAAAAAAA TTCCCCTCTG ATA CAGAGGGGAG CAAACGTCGCATTAT TERM 3523 2127344 - 2127324 - R 100 -15.5 -3.83561 | overlap 2127323 TTCCTTTAAAAAAAT TCCCCTCTG ATA CAGAGGGGA GCAAACGTCGCATTA APL_1896 2128148 - 2127357 - | hypothetical protein TERM 3524 2128105 - 2128090 - G 71 -6.8 -4.23213 | overlap 2128091 CCGATACCGAATAAA CCGGCT AAGA AGCCGA CCGCCGAACCTACGA nudH 2128765 - 2128145 - | dinucleoside polyphosphate hydrolase TERM 3525 2128195 - 2128207 + g 78 -5.5 -4.93365 | opp_overlap 2128188, overlap 2128196 ACATACGAGCAGATT TGCGA AAT TCGCG TTTTTGATTATCACG TERM 3526 2129272 - 2129247 - R 89 -3.4 -5.95539 | gap 1, opp_overlap 2129250, overlap 2129250 2129265 TTTTAAACAAAAAAA TAAGACAGATC CAAAC GATCTGCC-TA TTGCAAAAAACGGAA TERM 3527 2129270 - 2129250 - R 88 -7.6 -5.01858 | opp_overlap 2129250, overlap 2129247 2129265 TAAACAAAAAAATAA GACAGATC CAAAC GATCTGCC TATTGCAAAAAACGG ap2029 2130078 - 2129311 - | hypothetical protein TERM 3528 2129554 - 2129539 - G 70 -5.4 -4.46212 | opp_overlap 2129516 TTGGCTACGAGAAAA CGGCTT GTTT AAACCG AGATCCGCCACCGTG TERM 3529 2130153 - 2130127 - R 100 -13.8 -5.36441 | opp_overlap 2130127 2130134 TTGCCATAGAAAAAA TGCCAAGCACTC TGT GAGTGTTTGGCA TCTCGTTCTAAAAAC TERM 3530 2130127 - 2130153 + r 100 -16 -2.96274 | opp_overlap 2130127, overlap 2130134 TTGCCATAGAAAAAA TGCCAAGCACTC TGT GAGTGTTTGGCA TCTCGTTCTAAAAAC TERM 3531 2130134 - 2130146 + r 71 -7.7 -3.65313 | opp_overlap 2130127, overlap 2130127 AGAAAAAATGCCAAG CACTC TGT GAGTG TTTGGCATCTCGTTC ppa 2130701 - 2130174 - | inorganic pyrophosphatase TERM 3532 2131047 - 2131009 - g 81 -11 -3.36175 | opp_overlap 2131002 2131001 2131021 AACGCCTATCGACAA GCGGTTGAAAATTGCCGA AAT TCCGCATTTTCCGACCGC TTGCAAGTTTATCAA APL_1900 2130775 - 2131485 + | hypothetical protein TERM 3533 2131520 - 2131491 - T 95 -12.3 -3.68908 | opp_overlap 2131493 2131498, overlap 2131498 AAATATGTAGCCAAA CAAAAAACCGACC AAGC GGTCGGTTTTCTA TATTCGATGGGTTAC TERM 3534 2131493 - 2131518 + T 80 -10.5 -3.11088 | opp_overlap 2131491 2131498, overlap 2131498 ATATGTAGCCAAACA AAAAACCGACC AAGC GGTCGGTTTTC TATATTCGATGGGTT TERM 3535 2131513 - 2131498 - T 100 -10.4 -5.65927 | opp_overlap 2131493 2131498, overlap 2131491 TAGCCAAACAAAAAA CCGACC AAGC GGTCGG TTTTCTATATTCGAT TERM 3536 2131498 - 2131513 + T 100 -10.4 -4.68545 | opp_overlap 2131498 2131491, overlap 2131493 TAGCCAAACAAAAAA CCGACC AAGC GGTCGG TTTTCTATATTCGAT rraA 2132029 - 2131532 - | ribonuclease activity regulator protein RraA TERM 3537 2131648 - 2131620 - G 73 -7.3 -4.15044 | opp_overlap 2131640 2131647, overlap 2131624 2131639 TCTTCCGGGAAGAAA GTCACGCCGCCGA AAT TCACCGGCGTATC GACTTCGCCGATTTC yrhG 2132332 - 2133024 + | putative transport protein YrhG TERM 3538 2133036 - 2133074 + F 100 -15.7 -5.3689 | gap 1, opp_overlap 2133025 2133056, overlap 2133025 CTAAGCTTTTCTCAA GCGGTTATTTTTCTGCAA AATT TTGCA-AAAAATAACCGC TTTTATTTTCTTTAT TERM 3539 2133905 - 2133936 + G 71 -8.8 -3.30124 | AGCACTGCTTCGCAC TTTTCATCCGATTG ATAA CATTCGGCTGAAAA TTATGGCGAATGAAA APL_1903 2133195 - 2134019 + | hypothetical protein APL_1904 2134926 - 2134138 - | hypothetical protein TERM 3540 2134825 - 2134837 + g 70 -5.5 -4.45485 | opp_overlap 2134825, overlap 2134814 AGGGGCTTTTAAGAA GGCTT TAG GAGCC TTTTCTAAATATCGT TERM 3541 2135114 - 2135076 - R 100 -12.6 -4.64766 | opp_overlap 2135077, overlap 2135077 TTCATATTTCAAAAA GGTAGGTTAAAGCCTTGT ACT ATAAGGCTTTAACCCACT TTTTACCAACCTTTT TERM 3542 2135113 - 2135077 - R 100 -16.1 -3.38378 | opp_overlap 2135077, overlap 2135076 TCATATTTCAAAAAG GTAGGTTAAAGCCTTGT ACT ATAAGGCTTTAACCCAC TTTTTACCAACCTTT TERM 3543 2135077 - 2135113 + r 100 -16.1 -4.58685 | opp_overlap 2135077 2135076 TCATATTTCAAAAAG GTAGGTTAAAGCCTTGT ACT ATAAGGCTTTAACCCAC TTTTTACCAACCTTT TERM 3544 2135179 - 2135148 - R 100 -11 -4.12188 | opp_overlap 2135153 2135166, overlap 2135153 CTACTATGCCTAAAA TAAAAGGCTTAGCA AATT CGCTAAGCCTTTTT AATGTTTAGTGTTTA TERM 3545 2135174 - 2135153 - R 100 -10.9 -5.08255 | opp_overlap 2135153 2135166, overlap 2135148 ATGCCTAAAATAAAA GGCTTAGCA AATT CGCTAAGCC TTTTTAATGTTTAGT TERM 3546 2135153 - 2135174 + r 100 -10.2 -4.946 | opp_overlap 2135148 2135153, overlap 2135166 ATGCCTAAAATAAAA GGCTTAGC AAATTC GCTAAGCC TTTTTAATGTTTAGT dnaJ 2136327 - 2135185 - | chaperone protein dnaJ TERM 3547 2135425 - 2135435 + g 70 -5.4 -4.4518 | TTTGCCGGTTTGGGT TTCC GCC GGAA TTTTCAGTTTTAATT TERM 3548 2135899 - 2135910 + g 71 -3 -5.03747 | TTCGGCAAGTGTTGA GATA CGAA TATC TTTTTTACAGCCTTT TERM 3549 2136401 - 2136376 - R 84 -11.3 -3.14211 | gap 1 ACCGCTTGTCATGAA CT-CCCCTCTTT AGC AAAGAGGGGCAG GGGGAGATTTGGCAG TERM 3550 2136506 - 2136533 + r 81 -8.4 -4.24002 | opp_overlap 2136511, overlap 2136511 ACTTGTTATATACAC CAAAAGGGCGTG TCGC CACGCCCTTTGA TTTTACGATTTGAGC TERM 3551 2136528 - 2136511 - R 100 -12.7 -4.41353 | opp_overlap 2136506 2136511 TTATATACACCAAAA GGGCGTG TCGC CACGCCC TTTGATTTTACGATT TERM 3552 2136511 - 2136528 + r 100 -12.7 -4.21408 | opp_overlap 2136511, overlap 2136506 TTATATACACCAAAA GGGCGTG TCGC CACGCCC TTTGATTTTACGATT dnaK 2138455 - 2136557 - | chaperone protein dnaK TERM 3553 2138603 - 2138584 - R 95 -8.6 -5.04249 | gap 1 TTTTGAAAAAAGAAA CGGG-ACGT TCC ACGTTCCCG TTCAGACGAAACAAT TERM 3554 2138715 - 2138695 - R 100 -12.6 -5.91981 | opp_overlap 2138695 2138692 2138691 AAAACGGAAAAAAAA GCCCGTTC GCATT GAACGGGC TGGCTTTCAGAGCAT TERM 3555 2138695 - 2138715 + r 87 -13.3 -2.64274 | opp_overlap 2138695, overlap 2138692 2138691 AAAACGGAAAAAAAA GCCCGTTCG CAT TGAACGGGC TGGCTTTCAGAGCAT xylB 2140175 - 2138730 - | xylulose kinase TERM 3556 2138831 - 2138819 - G 73 -9.1 -3.54741 | GATTAGGTTGGTAAA CCGCT TCA AGCGG TAACGGCTGACAGAA TERM 3557 2139495 - 2139507 + g 74 -7.7 -4.06903 | ACCGCCACCGGCAAT TACCG GAA CGGTA TTTAATTTCCAGCTT TERM 3558 2140216 - 2140194 - R 79 -10.6 -2.79273 | overlap 2140193 GCCTCCTAAGAGAAC TCCCCTCTTT AGA AAAGAGGGGC TGGGGGAGATTTGAT TERM 3559 2140327 - 2140349 + r 77 -10.6 -2.53271 | opp_overlap 2140343 2140345, overlap 2140326 2140325 AACAAATCTCCCCTA ACCCCTCTTT ACT AAAGAGGGGG ATCTTGTCCCCCTAC TERM 3560 2140361 - 2140345 - R 79 -9.4 -3.44848 | opp_overlap 2140327 2140326 2140325, overlap 2140343 CCTCTTTACTAAAGA GGGGGA TCTTG TCCCCC TACAATAATAATTAA xylA 2141692 - 2140373 - | xylose isomerase TERM 3561 2140691 - 2140711 + g 70 -6 -4.25074 | ATCGAAGTTGAAGCC GCCGGTGG TAAAT CCGCCCGC TTTTAAGATTTCATA xylF 2141946 - 2142944 + | D-xylose transporter subunit XylF TERM 3562 2142963 - 2142984 + F 79 -8 -4.03234 | opp_overlap 2142963 ATCTTAATCTTTAAA GTGCGGTT TATCAC GACCGCAC TTTATCTAACGGAGG xylG 2143008 - 2144522 + | xylose transporter ATP-binding subunit xylH 2144526 - 2145653 + | xylose transport system permease protein xylH TERM 3563 2145714 - 2145684 - f 89 -12.1 -3.15579 | opp_overlap 2145684 TTAATTCTTTAGCAA GCACTCAATATTC TTAGG AAATATTGAGTGC TTTTTTCATAACTAC TERM 3564 2145684 - 2145714 + F 100 -11.4 -5.1675 | opp_overlap 2145684 TTAATTCTTTAGCAA GCACTCAATATT CTTAGGA AATATTGAGTGC TTTTTTCATAACTAC xylR 2145778 - 2146959 + | xylose operon regulatory protein pepO 2146964 - 2148991 + | neutral endopeptidase TERM 3565 2148995 - 2149050 + F 89 -9.2 -4.09511 | gap 1, opp_overlap 2149018, overlap 2148998 CGCATTTGGTAATCG CAAGCGGTCGAGTTTTGACAAAATTTT GCA AAAAATCCGCCAAA-TTCGACCGCTTG TTTTAAGGAACTGTT TERM 3566 2149126 - 2149136 + G 100 -8.2 -4.98531 | AGTGTTATCGCTTGT CCGC ATT GCGG TTTTTCATTTAAAGA APL_1914 2149066 - 2149293 + | hypothetical protein TERM 3567 2149323 - 2149301 - T 100 -15 -4.96773 | opp_overlap 2149301 TTAACTAAAAAGAAA GGCATAGGTT GGG AACCTATGCC TTTTTACGATTCGGT TERM 3568 2149301 - 2149323 + T 100 -15 -4.67234 | opp_overlap 2149301 TTAACTAAAAAGAAA GGCATAGGTT GGG AACCTATGCC TTTTTACGATTCGGT panF 2150774 - 2149362 - | sodium/panthothenate symporter TERM 3569 2149433 - 2149399 - G 72 -6.5 -4.24342 | gap 1 TTGCCGATTAAGAAA GCGATTAAACCGATCA CTAA CGA-CGGTACAATCGC ATGGAAGCTCAAAAT TERM 3570 2150632 - 2150608 - G 70 -7.8 -3.6053 | gap 1, overlap 2150604 2150609 CCGCCGATAAACGAA CTCGCCCCGAC ATAA GTCGCGGCG-G TGGTCATCGCCAACA ap2048 2151018 - 2150794 - | hypothetical protein TERM 3571 2151059 - 2151044 - R 85 -9 -4.1822 | opp_overlap 2151041 2151044 TTCCATTGTAAGAAA GCCTCA AAAA TGAGGC TCGTTAATTATCAAT metJ 2151387 - 2151070 - | transcriptional repressor protein MetJ vacJ 2151556 - 2152305 + | lipoprotein VacJ-like protein precursor TERM 3572 2152355 - 2152306 - f 70 -8 -3.2247 | opp_overlap 2152308 2152309 2152312, overlap 2152294 2152299 2152308 2152311 AAAGATATTGATTAA TATCAGGCGGTCAAATTTGCAA AAAAGG TTGTAAATTTGACCGCTTGCTT TTGGATAGGGCAAAG TERM 3573 2152353 - 2152308 - f 83 -10.6 -3.1676 | opp_overlap 2152308 2152309 2152312, overlap 2152294 2152299 2152306 2152311 AGATATTGATTAATA TCAGGCGGTCAAATTTGCAA AAAAGG TTGTAAATTTGACCGCTTGC TTTTGGATAGGGCAA TERM 3574 2152308 - 2152353 + F 100 -15 -4.18018 | opp_overlap 2152294 2152299 2152308 2152306 2152311, overlap 2152309 2152312 AGATATTGATTAATA TCAGGCGGTCAAATTTGCAA AAAAGG TTGTAAATTTGACCGCTTGC TTTTGGATAGGGCAA TERM 3575 2152309 - 2152352 + F 100 -18.5 -3.10597 | opp_overlap 2152299 2152308 2152306 2152311, overlap 2152308 2152312 GATATTGATTAATAT CAGGCGGTCAAATTTGCAA AAAAGG TTGTAAATTTGACCGCTTG CTTTTGGATAGGGCA TERM 3576 2152350 - 2152311 - f 81 -10.9 -2.77999 | opp_overlap 2152309 2152308 2152312, overlap 2152308 2152306 TATTGATTAATATCA GGCGGTCAAATTTGCAA AAAAGG TTGTAAATTTGACCGCT TGCTTTTGGATAGGG TERM 3577 2152312 - 2152349 + F 100 -16.6 -3.69605 | opp_overlap 2152311 2152308 2152306, overlap 2152309 2152308 ATTGATTAATATCAG GCGGTCAAATTTGCAA AAAAGG TTGTAAATTTGACCGC TTGCTTTTGGATAGG APL_1919 2152380 - 2153189 + | hypothetical protein TERM 3578 2153215 - 2153234 + F 100 -12.2 -5.10163 | opp_overlap 2153211 2153215 TTGTAATTTAATTGA CGGTAAGG GAAA CCTTACCG TTTTGTTTTGAACTT TERM 3579 2153234 - 2153215 - f 84 -12.2 -2.57013 | opp_overlap 2153215, overlap 2153211 TTGTAATTTAATTGA CGGTAAGG GAAA CCTTACCG TTTTGTTTTGAACTT APL_1920 2153314 - 2155281 + | site-specific recombinase TERM 3580 2155340 - 2155287 - f 100 -11.3 -4.56802 | opp_overlap 2155295, overlap 2155295 AAATAAATAGTAAAA CGATACAAGCGGTCTAATTTGCAAA GATT TTTACAAATTAGACCGCTTTTTTTA TCTCTTTTTAATATG TERM 3581 2155332 - 2155295 - f 100 -19.5 -3.69359 | opp_overlap 2155295, overlap 2155287 AGTAAAACGATACAA GCGGTCTAATTTGCAAA GATT TTTACAAATTAGACCGC TTTTTTTATCTCTTT TERM 3582 2155295 - 2155332 + F 100 -17.3 -5.82281 | opp_overlap 2155287 2155295 AGTAAAACGATACAA GCGGTCTAATTTGCAAA GATT TTTACAAATTAGACCGC TTTTTTTATCTCTTT TERM 3583 2155952 - 2155938 - f 76 -4.2 -5.19879 | GGTGAAATATAAAAA GGATGT CTA ACAGCC TCTCCATGCTCTTTA TERM 3584 2156514 - 2156484 - g 74 -4.9 -4.788 | gap 1, overlap 2156486 AAATTAAGTCAAAAA TATCCTAATAATCC GAAC GGTTTATTAGGA-A GCAGCTTGGTTGAAG TERM 3585 2156513 - 2156486 - g 86 -10 -3.99461 | overlap 2156484 ATTAAGTCAAAAATA TCCTAATAATCC GAAC GGTTTATTAGGA AGCAGCTTGGTTGAA TERM 3586 2157667 - 2157649 - g 73 -8.8 -3.43944 | opp_overlap 2157643 2157659, overlap 2157652 ACGATGAAGCCAGAA GAGGCGGT TTT ACCGCATC ATTCGGTATTTCTCA pgaA 2156031 - 2158523 + | biofilm PGA synthesis protein PgaA precursor TERM 3587 2159576 - 2159596 + G 78 -9.7 -3.42395 | opp_overlap 2159576, overlap 2159574 TCGGATAGCAATAAA GACGGCATC ATT GATGCGGTC TATTTCCCTAATAAA TERM 3588 2159596 - 2159576 - g 93 -9.7 -4.29106 | opp_overlap 2159576 2159574 TCGGATAGCAATAAA GACGGCATC ATT GATGCGGTC TATTTCCCTAATAAA TERM 3589 2160283 - 2160267 - g 78 -5.2 -5.03747 | AAATGCTGCAAAAAA TGAAAC CTTAT GTTTCA AGTAATAGAGATATC pgaB 2158538 - 2160310 + | biofilm PGA synthesis lipoprotein PgaB precursor TERM 3590 2161336 - 2161352 + G 88 -6.6 -5.10497 | TTAAAACCGAGCATT GCGATA CTGTT TATCGC TTTTTTCACTCAATT pgaC 2160319 - 2161554 + | N-glycosyltransferase PgaC pgaD 2161556 - 2161840 + | biofilm PGA synthesis protein pgaD TERM 3591 2161867 - 2161910 + T 100 -14.9 -4.49316 | opp_overlap 2161870, overlap 2161870 AACCGATCAAATAGA AAAGCGGTTGAATTTGCAA AAAATC TTGTAAATTCAACCGCTTG TTTATTATTAGTGAT TERM 3592 2161870 - 2161907 + T 100 -16.6 -4.34486 | opp_overlap 2161870, overlap 2161867 CGATCAAATAGAAAA GCGGTTGAATTTGCAA AAAATC TTGTAAATTCAACCGC TTGTTTATTATTAGT TERM 3593 2161907 - 2161870 - T 100 -15.1 -4.82128 | opp_overlap 2161867 2161870 CGATCAAATAGAAAA GCGGTTGAATTTGCAAA AAAT CTTGTAAATTCAACCGC TTGTTTATTATTAGT tpiA 2162714 - 2161944 - | triosephosphate isomerase TERM 3594 2162947 - 2162960 + H 78 -2.4 -5.64274 | opp_overlap 2162947 TCAATAGGCAGGAAA GTAC TTTAGT GTAC TTTTTTTATGCCTGA TERM 3595 2163870 - 2163858 - g 75 -9.1 -3.62418 | opp_overlap 2163858 2163857 2163860 AGAACGTATGGCAAA CGCAC GCC GTGCG ATGTTGTGTAAACCG TERM 3596 2163912 - 2163929 + G 71 -3.3 -4.91473 | overlap 2163905 GTGGCGATTTGAAGC CGAGGGC TTAC GACTTCG TTTCTTTTTAGATTC truD 2162989 - 2164002 + | tRNA pseudouridine synthase D TERM 3597 2164483 - 2164473 - g 71 -3.2 -5.04325 | overlap 2164464 CCGAAAGTACAAAAA GGCA TTG TACC TGCCCGTCAGATTTT surE 2164002 - 2164766 + | 5'-nucleotidase surE APL_1928 2164766 - 2165350 + | hypothetical protein APL_1929 2165362 - 2165937 + | lipoprotein TERM 3598 2165964 - 2165988 + F 75 -4.9 -4.93177 | TTTTGTTAGTATTAA CGACAGTTGTG CTT TGCCGCTGTCG TTTTATTCGTTTTTA TERM 3599 2166106 - 2166088 - f 72 -8.1 -3.43676 | CGGAGCAAGTGAGAA CGCACCG AAAGA CGATGCG GAATTGGCGCCGAGG TERM 3600 2166388 - 2166376 - g 73 -10.5 -2.52464 | GCCGGGCGTAATGCA GCCGG TAG CCGGC AGCGCGCCGACAACT TERM 3601 2166517 - 2166502 - g 81 -5.4 -5.24531 | opp_overlap 2166488, overlap 2166504 ACCGGTTATAAAAAA TCCGGT CATT ACCGAA CAGCCGGCTCAGCCG TERM 3602 2167447 - 2167419 - g 77 -10.5 -3.14051 | opp_overlap 2167428, overlap 2167417 2167423 2167427 GTACCGGTACGAACA GTAACAAACTTCA CTT TGAAATTCGTTAC AAAGGTAAATCGGTT APL_1930 2166254 - 2167492 + | Outer membrane antigenic lipoprotein B precursor TERM 3603 2167515 - 2167550 + F 100 -11.4 -5.19261 | gap 1, opp_overlap 2167513, overlap 2167499 GTTTAGTTAAAAGCT GACCGCTTGTGAGTA TGATTTT TA-TCACAAGCGGTC TTTTTTCATCAGTTT tagI 2167581 - 2168144 + | 3-methyladenine-DNA glycosidase TERM 3604 2168187 - 2168150 - T 74 -5.7 -4.76171 | opp_overlap 2168153, overlap 2168151 2168153 GAAAAAATGATAAAA GGATCAGCCTACAAA AAGAGGAA TTTGTAGGCTGATTT TTTATTGATTAATGA TERM 3605 2168186 - 2168151 - T 79 -9.2 -3.43262 | opp_overlap 2168153, overlap 2168150 2168153 AAAAAATGATAAAAG GATCAGCCTACAAA AAGAGGAA TTTGTAGGCTGATT TTTTATTGATTAATG TERM 3606 2168184 - 2168153 - T 89 -11.8 -3.24725 | opp_overlap 2168153, overlap 2168151 2168150 AAAATGATAAAAGGA TCAGCCTACAAA AAGAGGAA TTTGTAGGCTGA TTTTTTATTGATTAA TERM 3607 2168153 - 2168184 + T 100 -11.8 -5.5604 | opp_overlap 2168153 2168151 2168150 AAAATGATAAAAGGA TCAGCCTACAAA AAGAGGAA TTTGTAGGCTGA TTTTTTATTGATTAA TERM 3608 2168718 - 2168701 - T 80 -6.3 -4.78839 | overlap 2168704 2168705 AATTCGACAATAAAA TTAGCCG CATT CGACTAA TGCGGAACGTCCCCT APL_1934 2169802 - 2169338 - | hypothetical protein APL_1935 2170224 - 2169799 - | hypothetical protein TERM 3609 2170076 - 2170058 - G 73 -7.4 -4.16016 | opp_overlap 2170070 2170071, overlap 2170070 2170071 TCATTGCGTAAGAAA CGGGTAGT AGA ACTACCGG CATCGGTACTTTGCG APL_1936 2170437 - 2170294 - | hypothetical protein TERM 3610 2170370 - 2170349 - G 81 -9.5 -3.89524 | ATTCCACCCCATAAA TCTTTGGCA AAAC CGCCAAAGA AAATAACGGCACATA hemH 2171574 - 2170615 - | ferrochelatase rpmH 2171850 - 2171984 + | 50S ribosomal protein L34 rnpA 2172077 - 2172379 + | ribonuclease P APL_1940 2172340 - 2172642 + | hypothetical protein TERM 3611 2172678 - 2172651 - T 95 -12.8 -3.78902 | opp_overlap 2172656, overlap 2172656 GAAGTAAGAGGCAAA CAAAAGGCGACC AAGC GGTCGCCTTTTT TGATCTTTTTGCAAT TERM 3612 2172656 - 2172673 + T 100 -12.7 -5.38348 | opp_overlap 2172651 2172656 AAGAGGCAAACAAAA GGCGACC AAGC GGTCGCC TTTTTTGATCTTTTT TERM 3613 2172673 - 2172656 - T 100 -12.7 -4.93288 | opp_overlap 2172656, overlap 2172651 AAGAGGCAAACAAAA GGCGACC AAGC GGTCGCC TTTTTTGATCTTTTT glnA 2174108 - 2172693 - | glutamine synthetase TERM 3614 2174416 - 2174450 + r 70 -8.1 -3.18681 | gap 1, opp_overlap 2174422, overlap 2174422 2174425 TTTATTCATTACGTT TTAAAATGCGCTAGGT TTTT ACCTAGC-CATTTTCA TTAATCACGTTAGAA TERM 3615 2174422 - 2174444 + r 78 -7.1 -4.45544 | gap 1, opp_overlap 2174422, overlap 2174416 2174425 CATTACGTTTTAAAA TGCGCTAGGT TTTT ACCTAGC-CA TTTTCATTAATCACG TERM 3616 2174444 - 2174422 - R 75 -7.1 -4.10161 | gap 1, opp_overlap 2174422 2174416 2174425 CATTACGTTTTAAAA TGCGCTAGGT TTTT ACCTAGC-CA TTTTCATTAATCACG TERM 3617 2174425 - 2174442 + r 75 -9.9 -2.55624 | opp_overlap 2174422, overlap 2174422 2174416 TACGTTTTAAAATGC GCTAGGT TTTT ACCTAGC CATTTTCATTAATCA icc 2175293 - 2174466 - | cyclic 3',5'-adenosine monophosphate phosphodiesterase TERM 3618 2174908 - 2174882 - G 76 -10.8 -2.72166 | opp_overlap 2174882, overlap 2174881 2174879 GTCCGAATGAAAGAT GTCCGCTTGCCG CAC CGGCAATCTGAC TGTTAAGCAAAATAA TERM 3619 2174882 - 2174908 + g 79 -10.8 -3.02144 | opp_overlap 2174882 2174881 2174879 GTCCGAATGAAAGAT GTCCGCTTGCCG CAC CGGCAATCTGAC TGTTAAGCAAAATAA TERM 3620 2175047 - 2175035 - G 70 -5.5 -4.5442 | CTTCCAACCAGAAAA TCGGC TTT GCCAA CGGTTTGACCATTTG TERM 3621 2175251 - 2175263 + g 79 -3.4 -5.40072 | TGATTTGCAATAATC GAAC GACCG GTTC TTTTTTTCCAAGCGA TERM 3622 2175471 - 2175448 - R 100 -11.1 -5.07567 | opp_overlap 2175447 2175446 GGATACTTCAAAAAA TTTGCCCTC ATTAAA GAGGGCAAA AGTATTCGTCGTTAT APL_1943 2176123 - 2175500 - | ADP-ribose pyrophosphatase APL_1944 2176552 - 2176133 - | phosphate-starvation-inducible protein PsiE TERM 3623 2176516 - 2176496 - G 80 -4.8 -5.08824 | opp_overlap 2176496 2176510 CGTCCATTGAAAAAA TTCGGAAA CGAAT TTTCCAAA GCGGGAATGTTTTTC APL_1945 2177273 - 2176545 - | hypothetical protein TERM 3624 2177146 - 2177158 + g 71 -6.9 -4.12198 | opp_overlap 2177144 2177146 GCCAATAAAAAACGA GCCGT TCT GCGGC TTTTCCAACGTTGTA APL_1946 2177761 - 2177333 - | hypothetical protein TERM 3625 2177965 - 2177950 - g 77 -6.2 -4.67048 | GCATGTTAAAACAAA TTCAGA AATT TCTGAA ATTAGAAGCGGCGAG TERM 3626 2178129 - 2178146 + G 82 -3.3 -5.49569 | opp_overlap 2178129 TTAATGTGGGTAAAC GACGGCT TTAT GGCGGTC TTTTTTATCTTAGTC TERM 3627 2178665 - 2178677 + G 77 -10.5 -3.1634 | opp_overlap 2178665 2178667 GTTGCGCGGTAAAAA CGGCG AAG CGCCG TTACATCATTTGGAA TERM 3628 2178677 - 2178665 - g 100 -10.5 -4.56597 | opp_overlap 2178665, overlap 2178667 GTTGCGCGGTAAAAA CGGCG AAG CGCCG TTACATCATTTGGAA nhaA 2177937 - 2179121 + | Na(+)/H(+) antiporter 1 (Sodium/proton antiporter 1) TERM 3629 2179156 - 2179179 + F 76 -6.7 -4.54727 | opp_overlap 2179156 TTTTCACAAACTAAA TGCCTCAGC GAATCG GTTGGGGCA TTTTCATTTCAACCG APL_1948 2179264 - 2179752 + | hypothetical protein TERM 3630 2179784 - 2179753 - T 88 -13.2 -3.14881 | opp_overlap 2179753 2179760, overlap 2179760 CAATTTTTCTATTAA GTAAAAAGGTGCAA TTCA TTGCACCTTTTTTC GTTTTAGATCTGTAG TERM 3631 2179753 - 2179784 + T 91 -13.2 -3.15231 | opp_overlap 2179753 2179760, overlap 2179760 CAATTTTTCTATTAA GTAAAAAGGTGCAA TTCA TTGCACCTTTTTTC GTTTTAGATCTGTAG TERM 3632 2179777 - 2179760 - T 100 -9.9 -4.90266 | opp_overlap 2179753 2179760, overlap 2179753 TCTATTAAGTAAAAA GGTGCAA TTCA TTGCACC TTTTTTCGTTTTAGA TERM 3633 2179760 - 2179777 + T 100 -9.9 -5.46698 | opp_overlap 2179760 2179753, overlap 2179753 TCTATTAAGTAAAAA GGTGCAA TTCA TTGCACC TTTTTTCGTTTTAGA dtd 2180222 - 2179788 - | D-tyrosyl-tRNA deacylase rbn 2181049 - 2180219 - | ribonuclease BN TERM 3634 2180435 - 2180420 - G 78 -4 -5.16572 | overlap 2180397 ACCTAAGGTAAAAAA GATTGC GGCA ACAATC GCACCGAGCATAGCA proA 2182305 - 2181067 - | gamma-glutamyl phosphate reductase TERM 3635 2181277 - 2181301 + g 71 -9.3 -3.02263 | overlap 2181291 GCGAGCAAGTTGGTA ATCGGAAGTCA GAA TGGCTTCCGAA TGTTGCGAGCCGTAT TERM 3636 2181786 - 2181809 + g 88 -11 -3.90729 | overlap 2181806 CGGTGACTGCCTGAA CCGCCAGTTT CGGT AAACCGGCGG TTTCTAACGCTTGTT TERM 3637 2182406 - 2182394 - R 80 -2.7 -5.72622 | TTTACAAATAAAAAA GAAAA TAA TTCTC ATTTATATAGAATAA TERM 3638 2182672 - 2182647 - R 81 -6.1 -5.01732 | AACGGTCGCAAAAAA TCGGCGAAATT AAGA AAAATCGCCGA GCTATTCAAGAAGAG TERM 3639 2183522 - 2183536 + r 77 -8.6 -3.57144 | ACGTTTAGATTCCAT TCCGTT TGA AACGGA TTTCGGCATACACCA TERM 3640 2183769 - 2183757 - R 76 -7.7 -4.00445 | TATGACCAAGAACAA CTTGC CCC GCAAG AGCTGAATGCTAAAT TERM 3641 2184813 - 2184759 - R 100 -13.3 -4.17132 | gap 1, opp_overlap 2184769, overlap 2184769 AAACGTTTTAATAAA CCACAGAAAACACGGATTACA-CA GTATTGCT TGCTGTAATCCGTGTTTTTTATGG GCAAAGGAAATGGTA TERM 3642 2184803 - 2184769 - R 86 -8.1 -4.65584 | gap 1, opp_overlap 2184769, overlap 2184759 ATAAACCACAGAAAA CACGGATTACA-CA GTATTGCT TGCTGTAATCCGTG TTTTTTATGGGCAAA TERM 3643 2184769 - 2184803 + r 95 -8.8 -5.24129 | gap 1, opp_overlap 2184769 2184759 ATAAACCACAGAAAA CACGGATTACA-CAG TATTGC TTGCTGTAATCCGTG TTTTTTATGGGCAAA TERM 3644 2184969 - 2184932 - R 100 -13.7 -5.66989 | opp_overlap 2184932, overlap 2184966 TAAAGATTAAAAAAA GCGGTTAAATTTACAAA AACT TTTGCAAACCTAACCGC TTTGAGAGGACAAAC APL_1956 2185945 - 2184989 - | hypothetical protein TERM 3645 2185200 - 2185216 + g 84 -3.8 -5.5112 | TGAGTTGAATCACCC GTTAAA TTCAC TTTAAC TTTTTTATTAGTAAA APL_1957 2187207 - 2185963 - | Lipoprotein_5 domain-containing protein TERM 3646 2187582 - 2187570 - g 80 -9.1 -3.90856 | opp_overlap 2187574 AACTTGCCAACCAAA TCGCC GCA GGCGA GGTGGTGGAACGCCC TERM 3647 2188086 - 2188076 - g 74 -6.8 -4.30844 | opp_overlap 2188076 ATTGCATTAGCAAAA CCGA ATA TCGG TTTTACCTTAACGCA TERM 3648 2188076 - 2188086 + G 74 -6.8 -4.27316 | opp_overlap 2188076 ATTGCATTAGCAAAA CCGA ATA TCGG TTTTACCTTAACGCA TERM 3649 2188554 - 2188542 - g 70 -7.7 -3.66921 | AAGGGCAATCGGAAA TCGGT TTA ACCGA TCAAGTGAATGAGCC mutL 2187521 - 2189389 + | DNA mismatch repair protein TERM 3650 2189411 - 2189427 + F 70 -8.1 -3.31877 | opp_overlap 2189410 CAATTTGCAATAATC CCATAAT TTA ATTATGG TTAAGTTATTGATTT adhI 2189591 - 2190640 + | alcohol dehydrogenase TERM 3651 2190656 - 2190683 + F 100 -15 -5.71295 | GCCTTAATCGGCAAG CGGTCGTAAGTC GGAA GATTTACGACCG TTTTTGTTTTTATGT miaA 2190802 - 2191716 + | tRNA delta(2)-isopentenylpyrophosphate transferase hfq 2191781 - 2192059 + | RNA-binding protein Hfq TERM 3652 2192100 - 2192128 + F 82 -7.6 -4.61873 | gap 1, opp_overlap 2192100 TTAACCGATCAGATA CCAAATACAGATG AAAA CG-CTGTATTTGG TTTTGCTTTATCCGA TERM 3653 2193060 - 2193044 - g 70 -3.7 -4.77757 | overlap 2193046 TCGTAAAAATGAAAA TATTGAC GCG GTCAATC AAGTCTTAGATGAAA TERM 3654 2193425 - 2193411 - g 73 -7.2 -4.18763 | AATAAATGGCTAAAA CAATTC CCC GAATTG ACGGAATATATTGAA hflX 2192241 - 2193464 + | GTP-binding protein hflX TERM 3655 2193471 - 2193490 + T 73 -8.6 -3.21904 | gap 1, opp_overlap 2193471, overlap 2193471 GAGAACTAGCATACA GCGGGTAGC ATT GCTAC-CGC CTTTTGCATTTAATA TERM 3656 2193490 - 2193471 - T 71 -8.6 -2.98729 | gap 1, opp_overlap 2193471 2193471 GAGAACTAGCATACA GCGGGTAGC ATT GCTAC-CGC CTTTTGCATTTAATA APL_1963 2194060 - 2193500 - | hypothetical protein APL_1964 2194123 - 2194446 + | hypothetical protein TERM 3657 2194493 - 2194452 - T 100 -7.3 -5.85737 | opp_overlap 2194456 2194459 2194461, overlap 2194459 AGACGAATAAAAAAA GACCGAAGACCGCTTGTTA GCAT TAACAAGCGGTCTGATTTC ATTAACATTTAGCGA TERM 3658 2194456 - 2194489 + T 93 -11.1 -3.9444 | opp_overlap 2194452 2194459, overlap 2194459 2194461 GAATAAAAAAAGACC GAAGACCGCTTGTTA GCAT TAACAAGCGGTCTGA TTTCATTAACATTTA TERM 3659 2194486 - 2194459 - T 100 -17.2 -3.38522 | opp_overlap 2194459 2194456 2194461, overlap 2194452 TAAAAAAAGACCGAA GACCGCTTGTTA GCAT TAACAAGCGGTC TGATTTCATTAACAT TERM 3660 2194459 - 2194486 + T 100 -17.2 -3.02434 | opp_overlap 2194452 2194459, overlap 2194456 2194461 TAAAAAAAGACCGAA GACCGCTTGTTA GCAT TAACAAGCGGTC TGATTTCATTAACAT TERM 3661 2194461 - 2194484 + T 93 -14 -3.06399 | opp_overlap 2194459 2194452, overlap 2194459 2194456 AAAAAAGACCGAAGA CCGCTTGTTA GCAT TAACAAGCGG TCTGATTTCATTAAC crp 2195182 - 2194502 - | cAMP-regulatory protein APL_1966 2195472 - 2195254 - | hypothetical protein TERM 3662 2195341 - 2195358 + g 73 -5.5 -4.72272 | overlap 2195342 ATCCGCTTTTAATTG TGCGAGC AAAC GTTCGCG TTTTTCCTCCAAAGA slmA 2196086 - 2195478 - | nucleoid occlusion protein TERM 3663 2195608 - 2195623 + g 86 -9 -4.27316 | opp_overlap 2195596 2195608, overlap 2195596 TAGCCTGCCAATGCA CGTTCG TCCT CGAACG TTTTACCTTCACGCA TERM 3664 2196132 - 2196177 + r 80 -10.5 -3.05935 | opp_overlap 2196130 2196129, overlap 2196136 2196143 2196174 TTATCAAAAGAAGTC GCAAGCGGTCATTTTTGCAAA ATTT TTTACAAATTCGACCGCTTGC TTGAGTAGCGAATAT dut 2196647 - 2196192 - | deoxyuridine 5'-triphosphate nucleotidohydrolase dfp 2197861 - 2196656 - | bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase TERM 3665 2196922 - 2196936 + g 71 -10 -2.64375 | opp_overlap 2196921 2196922, overlap 2196911 GATTTTCGGTTAAAT TCGCCA CAT TGGCGA TAATGTCCGGATTTT TERM 3666 2196936 - 2196922 - G 71 -10 -2.71924 | opp_overlap 2196922 2196911, overlap 2196921 GATTTTCGGTTAAAT TCGCCA CAT TGGCGA TAATGTCCGGATTTT radC 2198069 - 2198731 + | DNA repair protein RadC TERM 3667 2198970 - 2198982 + G 80 -4.8 -5.10497 | opp_overlap 2198968, overlap 2198968 CACACGCATTAAACG CGAC TCGTC GTCG TTTTTTACCTAACTT rpmB 2198900 - 2199136 + | 50S ribosomal protein L28 rpmG 2199148 - 2199318 + | 50S ribosomal protein L33 TERM 3668 2199334 - 2199359 + F 100 -14.9 -3.9226 | opp_overlap 2199339, overlap 2199339 TTTTGGTTTAAGATT TAAAACCCAGC GAAT GCTGGGTTTTA TTTATGAGGTATATT TERM 3669 2199339 - 2199354 + F 100 -10.4 -4.99645 | opp_overlap 2199339, overlap 2199334 GTTTAAGATTTAAAA CCCAGC GAAT GCTGGG TTTTATTTATGAGGT TERM 3670 2199354 - 2199339 - f 100 -10.4 -4.28254 | opp_overlap 2199339 2199334 GTTTAAGATTTAAAA CCCAGC GAAT GCTGGG TTTTATTTATGAGGT APL_1973 2199731 - 2200291 + | hypothetical protein argD 2200641 - 2201936 + | diaminobutyrate--2-oxoglutarate aminotransferase TERM 3671 2201939 - 2201967 + F 100 -12.5 -4.41348 | overlap 2201940 2201943 GGTGCGTGGTTAATT TTAACCCTACACG AGC CGTGTAGGGTTGC TTTATTTGAGCCACG TERM 3672 2201940 - 2201966 + F 100 -16 -3.24488 | overlap 2201939 2201943 GTGCGTGGTTAATTT TAACCCTACACG AGC CGTGTAGGGTTG CTTTATTTGAGCCAC TERM 3673 2201943 - 2201963 + F 100 -15.5 -3.75884 | overlap 2201940 2201939 CGTGGTTAATTTTAA CCCTACACG AGC CGTGTAGGG TTGCTTTATTTGAGC TERM 3674 2201975 - 2201991 + F 100 -12.3 -5.00895 | AGGGTTGCTTTATTT GAGCCAC GCT GTGGCTC TTTTTATATCCTAGC TERM 3675 2202051 - 2202031 - f 87 -11.1 -3.35813 | GCTGAGTTTAATTAA CCTAGCGCG GCT CGTGCTAGG TACGAGAGAAAAAAT ddc 2202065 - 2203600 + | L-2,4-diaminobutyrate decarboxylase TERM 3676 2203614 - 2203652 + T 93 -12.7 -3.49898 | gap 1, opp_overlap 2203624, overlap 2203615 2203624 AATCGGTAAAACTTT AGC-TAAAAAAGACCGCT TATA AGCGGTCTTTTTTATGCG TTATAGCTATTTTTT TERM 3677 2203615 - 2203651 + T 100 -16.2 -2.68312 | gap 1, opp_overlap 2203624, overlap 2203614 2203624 ATCGGTAAAACTTTA GC-TAAAAAAGACCGCT TATA AGCGGTCTTTTTTATGC GTTATAGCTATTTTT TERM 3678 2203624 - 2203641 + T 100 -11.3 -5.3236 | opp_overlap 2203624, overlap 2203615 2203614 ACTTTAGCTAAAAAA GACCGCT TATA AGCGGTC TTTTTTATGCGTTAT TERM 3679 2203641 - 2203624 - T 100 -11.3 -5.09225 | opp_overlap 2203624 2203615 2203614 ACTTTAGCTAAAAAA GACCGCT TATA AGCGGTC TTTTTTATGCGTTAT yedF 2203928 - 2203659 - | hypothetical protein yedE 2205166 - 2203946 - | putative inner membrane protein TERM 3680 2203988 - 2204005 + g 74 -6.3 -4.57569 | CGCCACTCTTACTTT CGCTTTG CGAA TAAAGCG TTTTTCCCACCATAC TERM 3681 2204935 - 2204914 - G 75 -10.3 -2.83449 | opp_overlap 2204919 2204928, overlap 2204919 ACATGCCGAGAATCA TTAAACCGT CGAT ACGGTTTAA AATCGTTCCGTCTAA TERM 3682 2205645 - 2205633 - g 70 -7.7 -3.63569 | GTAACGGCTGAAGAA CAACG TTT CGTTG CCGTAATGAAAGGTG APL_1978 2205462 - 2205794 + | hypothetical protein TERM 3683 2205825 - 2205881 + F 84 -3.8 -5.70829 | gap 1, overlap 2205829 ATTTGCAGTTTTAAT GATGCCACGAAATAC-GCTGAAGACAC ATAA GTGTCGGTAGGGGTATTTTGTGGTTTC TTTTTTTCTACTATT TERM 3684 2205829 - 2205877 + F 82 -5.4 -5.27709 | gap 1, overlap 2205825 GCAGTTTTAATGATG CCACGAAATAC-GCTGAAGACAC ATAA GTGTCGGTAGGGGTATTTTGTGG TTTCTTTTTTTCTAC trmA 2205957 - 2207063 + | tRNA (uracil-5-)-methyltransferase TERM 3685 2207271 - 2207295 + T 93 -8 -5.71712 | opp_overlap 2207271 CCATCAAATTTATAA CTTGTTGATT GAGTA AATCAGCAAG TTTTTTTCTCTCAAC TERM 3686 2207442 - 2207467 + T 100 -12.7 -5.5604 | CGCCATCTTTCAGAG CCGCTTGTAAT GTAA ATTACAGGCGG TTTTTTCTTAGTTAA APL_1980 2208186 - 2207584 - | hypothetical protein TERM 3687 2208545 - 2208508 - R 93 -9.3 -4.64766 | gap 1, opp_overlap 2208509 2208510 2208511, overlap 2208511 TTCATATTTCAAAAA GAAGGCTTAAAGCCTTGT ACT ATAAGGCTTTAAGCCA-C TTTTTAGCAACAAAT TERM 3688 2208509 - 2208545 + r 100 -11.7 -4.56775 | opp_overlap 2208508 2208511, overlap 2208510 2208511 TCATATTTCAAAAAG AAGGCTTAAAGCCTTGT ACT ATAAGGCTTTAAGCCAC TTTTTAGCAACAAAT TERM 3689 2208510 - 2208544 + r 100 -15.2 -3.33744 | opp_overlap 2208508 2208511, overlap 2208509 2208511 CATATTTCAAAAAGA AGGCTTAAAGCCTTGT ACT ATAAGGCTTTAAGCCA CTTTTTAGCAACAAA TERM 3690 2208543 - 2208511 - R 100 -16.5 -4.43351 | opp_overlap 2208510 2208509 2208511, overlap 2208508 ATATTTCAAAAAGAA GGCTTAAAGCCTTGT ACT ATAAGGCTTTAAGCC ACTTTTTAGCAACAA TERM 3691 2208511 - 2208543 + r 100 -18.7 -2.60032 | opp_overlap 2208511 2208508, overlap 2208510 2208509 ATATTTCAAAAAGAA GGCTTAAAGCCTTGT ACT ATAAGGCTTTAAGCC ACTTTTTAGCAACAA TERM 3692 2208636 - 2208615 - R 100 -9.5 -5.49234 | opp_overlap 2208610 2208615 ACAGCTAACAAAAAA GCACAGAAC TTAT ATTCTGTGC TTTTGGCTTTTTATA TERM 3693 2208615 - 2208636 + r 89 -8.8 -4.5115 | opp_overlap 2208615, overlap 2208610 ACAGCTAACAAAAAA GCACAGAA CTTATA TTCTGTGC TTTTGGCTTTTTATA corA 2209600 - 2208647 - | magnesium/nickel/cobalt transporter CorA TERM 3694 2210130 - 2210148 + G 76 -8.1 -4.08064 | AAAAAGTGTTGGATC TTGCCGG CGGAA CCGGCGA TTTTACCGCAAAATT ubiE 2209901 - 2210677 + | ubiquinone/menaquinone biosynthesis methyltransferase ubiE APL_1983 2210703 - 2211335 + | hypothetical protein TERM 3695 2212818 - 2212803 - g 100 -9 -4.9138 | ATGAGCTAAATAAAA CCTTGC AAGC GCAAGG GCGGCAAAAATCCCA ubiB 2211332 - 2212966 + | ubiquinone biosynthesis protein ubiB TERM 3696 2213254 - 2213229 - g 71 -4.8 -4.58395 | overlap 2213236 2213241 2213245 GCGAGTTTTGAAAAA GTAGAAGC GAAAGAAGCG GCTTCTAC CGAACAAAAAGCGAA tatA 2213058 - 2213288 + | twin argininte translocase protein A tatB 2213292 - 2213879 + | sec-independent translocase TERM 3697 2214042 - 2214068 + F 74 -2.3 -5.40474 | gap 1, overlap 2214044 GCCCGCAGGGGCGAC GATGATTGCAAC CAAT GTTGCGA-CACC TTTTTTTACACCGAT tatC 2214043 - 2214615 + | Sec-independent protein translocase protein tatC TERM 3698 2214618 - 2214639 + F 95 -8.7 -5.25803 | opp_overlap 2214616 2214621, overlap 2214621 GATCGCCAATTAATC CAACCCGCT TGCA AGCGGGTTA TTTTTTATGAAAATT TERM 3699 2214636 - 2214621 - f 83 -10.4 -3.23899 | opp_overlap 2214618 2214621, overlap 2214616 CGCCAATTAATCCAA CCCGCT TGCA AGCGGG TTATTTTTTATGAAA TERM 3700 2214621 - 2214636 + F 100 -10.4 -4.72201 | opp_overlap 2214621 2214616, overlap 2214618 CGCCAATTAATCCAA CCCGCT TGCA AGCGGG TTATTTTTTATGAAA hemB 2214675 - 2215694 + | delta-aminolevulinic acid dehydratase TERM 3701 2215710 - 2215762 + F 88 -7.3 -5.02476 | gap 1, opp_overlap 2215710 2215747, overlap 2215715 CGATAAGAGTTAAAT GTAAGCGGTTAGATTGAATGAATT TTTTGT AAAACATTCGGTCTAACCG-TTAC TTTTTTAGGAGGTAT TERM 3702 2215715 - 2215758 + F 79 -8.3 -3.93166 | opp_overlap 2215710 2215747, overlap 2215710 AGAGTTAAATGTAAG CGGTTAGATTGAATGAATT TTTTGT AAAACATTCGGTCTAACCG TTACTTTTTTAGGAG TERM 3703 2215883 - 2215896 + G 71 -9.5 -2.9675 | overlap 2215874 ATTTTCGGCGGCTTA CCGGC TATT GCCGG TGTCATTCTGGCCTA APL_1989 2215781 - 2216143 + | hypothetical protein TERM 3704 2216152 - 2216187 + T 100 -14.2 -3.65425 | opp_overlap 2216161, overlap 2216161 TATGTAGTAAGTTGT TGCAAAAAAGCGGTCA AATT TGACCGCTTTTTTACG TTTAGGCTATCTAGG TERM 3705 2216178 - 2216161 - T 100 -11.3 -5.00884 | opp_overlap 2216152 2216161 AGTTGTTGCAAAAAA GCGGTCA AATT TGACCGC TTTTTTACGTTTAGG TERM 3706 2216161 - 2216178 + T 100 -11.3 -5.22039 | opp_overlap 2216161, overlap 2216152 AGTTGTTGCAAAAAA GCGGTCA AATT TGACCGC TTTTTTACGTTTAGG mutM 2217015 - 2216194 - | formamidopyrimidine-DNA glycosylase TERM 3707 2217042 - 2217072 + r 75 -4.7 -4.90079 | gap 1, opp_overlap 2217047, overlap 2217043 2217045 2217046 AAAGAATTTAGATAA ACAA-AGGGCAAGG ATAA CCTTGCCCGATTGA TTTTATTATTGCGCT TERM 3708 2217043 - 2217071 + r 73 -8.2 -3.52963 | gap 1, opp_overlap 2217047, overlap 2217042 2217045 2217046 AAGAATTTAGATAAA CAA-AGGGCAAGG ATAA CCTTGCCCGATTG ATTTTATTATTGCGC TERM 3709 2217046 - 2217067 + r 76 -10.1 -2.91144 | opp_overlap 2217047, overlap 2217045 2217043 2217042 AATTTAGATAAACAA AGGGCAAGG ATAA CCTTGCCCG ATTGATTTTATTATT TERM 3710 2217066 - 2217047 - R 100 -13.6 -4.63044 | opp_overlap 2217046 2217045 2217043 2217042 ATTTAGATAAACAAA GGGCAAGG ATAA CCTTGCCC GATTGATTTTATTAT brnQ 2218370 - 2217078 - | branched chain amino acid ABC transporter carrier protein TERM 3711 2217637 - 2217620 - G 75 -8.5 -3.86524 | ATACTTCCGCAGAAA TCGGTAA TTTG TTACCGA TCCAACCGATAGAGA TERM 3712 2217689 - 2217700 + g 81 -7.2 -4.58308 | opp_overlap 2217676 TTGCAGCGATTACCC CCGC CATT GCGG TTTGTTTACTTAATG TERM 3713 2217806 - 2217819 + g 70 -8.1 -3.60098 | CCATCGTATTGTAAC CGGCA AGGA TGCCG TTTACCATCGGCGCT TERM 3714 2218051 - 2218041 - G 76 -6.8 -4.56597 | overlap 2218049 TTGCTCGCCTAAAAA CGGT AAT ACCG CCATTTCATAAGCGG TERM 3715 2218471 - 2218444 - R 100 -11.4 -4.64361 | GAAAAAATAGTAAAA CCGAACTTTACC GAAA AGTAAAGCTCGG TTAAAAACAGACCGC fabG 2219221 - 2218496 - | 3-ketoacyl-(acyl-carrier-protein) reductase TERM 3716 2219085 - 2219107 + g 71 -4.8 -4.66953 | opp_overlap 2219087, overlap 2219086 2219087 CCGTGTTCGCCTAAG TATGCGGAAA TGC TTTCCGCACC TTTTTCCGATGTTGC TERM 3717 2219087 - 2219105 + g 83 -11.8 -2.62946 | opp_overlap 2219087, overlap 2219086 2219085 GTGTTCGCCTAAGTA TGCGGAAA TGC TTTCCGCA CCTTTTTCCGATGTT TERM 3718 2219105 - 2219087 - G 83 -11.8 -2.70932 | opp_overlap 2219087 2219086 2219085 GTGTTCGCCTAAGTA TGCGGAAA TGC TTTCCGCA CCTTTTTCCGATGTT TERM 3719 2219267 - 2219240 - R 77 -6.2 -4.82901 | overlap 2219241 2219242 TTTCTCCTATAAAAA GTTCCCCCCCTT TAAT AAGGAGGGGGAG GGGAGATAAGTGTGA TERM 3720 2219266 - 2219241 - R 81 -9.7 -3.49419 | overlap 2219240 2219242 TTCTCCTATAAAAAG TTCCCCCCCTT TAAT AAGGAGGGGGA GGGGAGATAAGTGTG TERM 3721 2219266 - 2219242 - R 81 -10.8 -2.6933 | gap 1, overlap 2219241 2219240 TCTCCTATAAAAAGT TCCCCC-CCTT TAAT AAGGAGGGGGA GGGGAGATAAGTGTG fabD 2220275 - 2219340 - | malonyl CoA-acyl carrier protein transacylase (MCT) TERM 3722 2220309 - 2220327 + r 78 -10.2 -2.62642 | overlap 2220308 TAAATTTGGTGCTGA GGACGCAC TAA GAGCGTCC GTTATGAATAATGCT APL_1994 2221088 - 2220342 - | hypothetical protein ispB 2222120 - 2221125 - | octaprenyl-diphosphate synthase rssA 2222409 - 2223227 + | hypothetical protein TERM 3723 2223271 - 2223287 + F 70 -4.5 -4.65032 | opp_overlap 2223281, overlap 2223272 2223281 AGGACGGCTTATTGT TTCTTTA AAG TAAAGAG TTTATTTATGATTTA APL_1997 2223391 - 2223942 + | hypothetical protein TERM 3724 2223970 - 2224004 + F 93 -8.1 -5.64274 | gap 1, opp_overlap 2223970 2223986 CTTTAATAGAATAAG CGGTTGTT-TTGTAAG ATTT TTTGCAAAAACAACCG TTTTTTTCTCAATAA APL_1998 2224143 - 2224556 + | hypothetical protein TERM 3725 2224582 - 2224620 + F 100 -14.7 -5.58179 | opp_overlap 2224578 2224601 CGATAAAAACGTTAA GCGGTCGGTTTTTGCAA AATTC TTGCAGAATTCGACCGC TTTTTTGTTATAATG rplU 2224909 - 2225220 + | 50S ribosomal protein L21 rpmA 2225241 - 2225498 + | 50S ribosomal protein L27 TERM 3726 2225545 - 2225520 - f 86 -10.5 -3.65425 | opp_overlap 2225525, overlap 2225525 TCGATAGATTTGAAA TAAAACCCCAC AAAT GTGGGGTTTTT TCTTACCTTTTTTCC TERM 3727 2225525 - 2225540 + F 100 -10.4 -5.52096 | opp_overlap 2225520 2225525 AGATTTGAAATAAAA CCCCAC AAAT GTGGGG TTTTTTCTTACCTTT TERM 3728 2225540 - 2225525 - f 100 -10.4 -4.89521 | opp_overlap 2225525, overlap 2225520 AGATTTGAAATAAAA CCCCAC AAAT GTGGGG TTTTTTCTTACCTTT TERM 3729 2225806 - 2225832 + G 79 -3 -5.37171 | AGACTATGGTTAATC GGAGTTATTGGA TTG TCTTGTAACTTC TTTTTATTTAATCTT APL_2001 2225578 - 2226522 + | hypothetical protein TERM 3730 2226725 - 2226695 - T 100 -9.1 -5.14894 | opp_overlap 2226695 2226697 2226699, overlap 2226699 AAAAAAGTAGAAAAA TAAACCGCTTGTA TCCCC TACAAGCGGTCTG TTTTTAAGCGAAATT TERM 3731 2226695 - 2226725 + T 93 -9.1 -4.57341 | opp_overlap 2226695 2226699, overlap 2226697 2226699 AAAAAAGTAGAAAAA TAAACCGCTTGTA TCCCC TACAAGCGGTCTG TTTTTAAGCGAAATT TERM 3732 2226697 - 2226723 + T 85 -9.5 -3.90048 | opp_overlap 2226695 2226699, overlap 2226695 2226699 AAAAGTAGAAAAATA AACCGCTTGTA TCCCC TACAAGCGGTC TGTTTTTAAGCGAAA TERM 3733 2226721 - 2226699 - T 100 -12.1 -5.00267 | opp_overlap 2226699 2226697 2226695, overlap 2226695 AAGTAGAAAAATAAA CCGCTTGTA TCCCC TACAAGCGG TCTGTTTTTAAGCGA TERM 3734 2226699 - 2226721 + T 91 -12.1 -3.53855 | opp_overlap 2226695 2226699, overlap 2226697 2226695 AAGTAGAAAAATAAA CCGCTTGTA TCCCC TACAAGCGG TCTGTTTTTAAGCGA APL_2002 2228220 - 2226751 - | hypothetical protein TERM 3735 2228326 - 2228310 - R 100 -9.5 -5.38321 | overlap 2228303 AAATATGATAAAAAA GCTATCT TTT AGATAGC CTAATAAAATTAAAT ap2140 2229145 - 2228336 - | hypothetical protein TERM 3736 2228410 - 2228422 + g 70 -7.7 -3.65314 | TCACATAATTCGCTC GCGTT TTT AACGC TTGTTCCGCATTGCC TERM 3737 2229008 - 2229019 + g 78 -2.2 -5.45802 | TCCGGTGGCAATCGC GGTA ATAA TGCC TTTTTGTTTTAAACG comF 2229265 - 2229942 + | competence protein F TERM 3738 2230334 - 2230361 + T 70 -4.2 -4.82901 | gap 1, opp_overlap 2230334, overlap 2230354 2230358 CAGGTTGTTTTAAAA GACGGTTGAAAAG GAG CTTCT-GACCGTC TTTTTGTAAGAGAGG rsmC 2231366 - 2230377 - | 16S ribosomal RNA m2G1207 methyltransferase TERM 3739 2231790 - 2231747 - g 75 -10.4 -2.89714 | overlap 2231750 2231760 2231784 ATCCAATCAGAATTA CAAGCGGTTGAAATTGCAAA AAAA TTTGCAAATCAGACCGCTTG GCAGCATAGCTCGTG TERM 3740 2231847 - 2231834 - g 74 -8.1 -4.00526 | AATGTCACAACTAAA CGCCA ACTT TGGCG ACAAATGGCGGCATT holD 2231501 - 2231893 + | DNA polymerase III subunit psi TERM 3741 2232311 - 2232296 - g 91 -7.6 -4.78848 | opp_overlap 2232295 2232296 CGGCGAAAGAGAAAA TGCCAT TGTT ATGGCA CTGTATTTATAAGTA rimI 2231886 - 2232323 + | ribosomal-protein-alanine N-acetyltransferase TERM 3742 2232466 - 2232451 - g 71 -9 -3.29511 | CCGACTTCTGTACAA GCGGAA ACCG TTCCGC ACGCGCTTGACGGAC srmB 2232346 - 2233683 + | ATP-dependent RNA helicase SrmB TERM 3743 2233689 - 2233728 + F 100 -17.4 -5.22137 | opp_overlap 2233689 GTCTGCGTAATACAA GCGGTTGAATTTTTGCAA AATT TTGCGGAAATTCGACCGC TTTTGTTTTCTAGTT TERM 3744 2233728 - 2233689 - f 89 -10.8 -3.65812 | opp_overlap 2233689 GTCTGCGTAATACAA GCGGTTGAATTTTTGCAA AATT TTGCGGAAATTCGACCGC TTTTGTTTTCTAGTT TERM 3745 2234253 - 2234269 + G 78 -9.3 -3.60348 | overlap 2234267 TTACACGTGCCTCGC CCGCCGC ATT GGGGCGG TTATATCGTATTACC pdxH 2233758 - 2234387 + | pyridoxamine 5'-phosphate oxidase TERM 3746 2234400 - 2234429 + T 95 -12.3 -3.54676 | opp_overlap 2234406, overlap 2234406 TAAGACGGCAGAGAT AAAAAATGGTGGG ATTT CCCACCATTTTTG TTGATTTGCCTGAAT TERM 3747 2234406 - 2234423 + T 100 -11.3 -5.24551 | opp_overlap 2234406, overlap 2234400 GGCAGAGATAAAAAA TGGTGGG ATTT CCCACCA TTTTTGTTGATTTGC TERM 3748 2234423 - 2234406 - T 100 -11.3 -5.4251 | opp_overlap 2234406 2234400 GGCAGAGATAAAAAA TGGTGGG ATTT CCCACCA TTTTTGTTGATTTGC hbpA 2236096 - 2234459 - | Heme-binding protein A TERM 3749 2235836 - 2235862 + g 72 -8.1 -3.76125 | gap 1, overlap 2235828 2235861 CCACGATTCGGCTAA CGCCGGTTCAAT CTCG GTTGAACC-GCG TTTAAATTCGACTAA TERM 3750 2236261 - 2236212 - R 100 -12.5 -5.20633 | gap 1, opp_overlap 2236212 AAAAAGATATAAAAA GCGGTCTAATTTCCGCTAAATTTT GCA AAAAAGTAG-GAAAATTAGACCGC TGGCTCAAGGAGATT aldA 2237768 - 2236287 - | putative aldehyde dehydrogenase aldA TERM 3751 2236421 - 2236399 - G 73 -9 -3.42503 | CCGGAAGATTTATAA CCGCCGAACG GTG CGCCCGCCGG TAGAATATTATAGCA TERM 3752 2237957 - 2237936 - R 100 -13.1 -5.08011 | opp_overlap 2237939 AAAATCGGCAAAAAA TAAGGACGC AGTA GCGTCCTTA TCGAGATAAACATAT TERM 3753 2237939 - 2237954 + r 83 -10.4 -3.31144 | opp_overlap 2237936 ATCGGCAAAAAATAA GGACGC AGTA GCGTCC TTATCGAGATAAACA APL_2012 2238543 - 2237974 - | hypothetical protein TERM 3754 2238435 - 2238451 + g 72 -7.9 -3.8186 | CTAAGCCTACGTTTT CGCCACC GAA GGTGCCG TTATTGATTAAGCTA TERM 3755 2239360 - 2239376 + G 76 -9.5 -3.51232 | overlap 2239356 GAATTTAGGTGTGAT TATCGTG ATT CACGATA TTAATTTGGCGGCAC fhuC 2238869 - 2239549 + | ferrichrome ABC transporter ATP-binding protein TERM 3756 2239577 - 2239631 + F 89 -10.9 -3.59946 | opp_overlap 2239580 2239582 2239588 2239590, overlap 2239580 2239582 2239587 TTTTTTTACCTCGGA ACACACAGAAACACACGGAAAATAT TTATC GTATTTTCCGTGGGGTTCTGTGTAA TTCTGTGGTTAAAAC TERM 3757 2239580 - 2239628 + F 100 -17 -2.92078 | opp_overlap 2239580 2239582 2239588 2239590, overlap 2239577 2239582 2239587 TTTTACCTCGGAACA CACAGAAACACACGGAAAATAT TTATC GTATTTTCCGTGGGGTTCTGTG TAATTCTGTGGTTAA TERM 3758 2239628 - 2239580 - f 100 -16.3 -3.03124 | opp_overlap 2239577 2239580 2239582 2239587, overlap 2239582 2239588 2239590 TTTTACCTCGGAACA CACAGAAACACACGGAAAATA TTTATCG TATTTTCCGTGGGGTTCTGTG TAATTCTGTGGTTAA TERM 3759 2239626 - 2239582 - f 88 -13.1 -3.07344 | opp_overlap 2239580 2239577 2239582 2239587, overlap 2239580 2239588 2239590 TTACCTCGGAACACA CAGAAACACACGGAAAATA TTTATCG TATTTTCCGTGGGGTTCTG TGTAATTCTGTGGTT TERM 3760 2239582 - 2239626 + F 90 -13.8 -3.00565 | opp_overlap 2239582 2239580 2239588 2239590, overlap 2239580 2239577 2239587 TTACCTCGGAACACA CAGAAACACACGGAAAATAT TTATC GTATTTTCCGTGGGGTTCTG TGTAATTCTGTGGTT TERM 3761 2239620 - 2239588 - f 89 -9.3 -4.21343 | opp_overlap 2239587 2239582 2239580 2239577, overlap 2239582 2239580 2239590 CGGAACACACAGAAA CACACGGAAAATA TTTATCG TATTTTCCGTGGG GTTCTGTGTAATTCT TERM 3762 2239618 - 2239590 - f 86 -10.5 -3.6979 | opp_overlap 2239587 2239582 2239580 2239577, overlap 2239588 2239582 2239580 GAACACACAGAAACA CACGGAAAATA TTTATCG TATTTTCCGTG GGGTTCTGTGTAATT APL_2014 2239666 - 2240505 + | ABC-type Fe3+-hydroxamate transport system, periplasmic component; FhuD TERM 3763 2240533 - 2240543 + G 73 -5.4 -4.62904 | TATTGTTCAGCGGAT TAGC CGT GCTA TTTTTCGGACTGTTT TERM 3764 2240599 - 2240609 + G 73 -5.4 -4.58395 | overlap 2240593 CGGACGGAAGCGGAT TAGC TTC GCTA TTTTTGCCGAGTGAA TERM 3765 2242253 - 2242270 + G 74 -4.1 -5.03314 | opp_overlap 2242265, overlap 2242254 TTTTATCGGTTTACT TGTACCG CAAA TGGTACG TTTTTTAGGGGTAAA fhuB 2240499 - 2242451 + | iron-hydroxamate transporter permease subunit TERM 3766 2243399 - 2243376 - g 70 -7.6 -3.68529 | opp_overlap 2243349 AGTTTATCAGTCAAA TTATCGCTAT GCTT ATAGCAATAA AGACCAATTTAGTGC APL_2016 2242636 - 2244489 + | ferrioxamine B receptor precursor TERM 3767 2244527 - 2244509 - f 89 -8.9 -4.34771 | opp_overlap 2244509 CAAAACCTATTAAAA GAGCTGA TAATT TCAGCTC TTTTTTATCATAATC TERM 3768 2244509 - 2244527 + F 95 -8.9 -5.32882 | opp_overlap 2244509 CAAAACCTATTAAAA GAGCTGA TAATT TCAGCTC TTTTTTATCATAATC TERM 3769 2244629 - 2244615 - g 78 -10 -3.53012 | TCTTGCCGGTTTAAA TGTGCG TAA CGCACA GGGGGAAGTGATTCA APL_2017 2244556 - 2244873 + | hypothetical protein TERM 3770 2244945 - 2244896 - T 93 -11.5 -3.99898 | gap 1, opp_overlap 2244898 2244899, overlap 2244899 2244902 GAAGTAATTCATAAA CGACAAGCGGTCGGAATTTGCAGA AAA TTTGCAGAATCCGACCGCTTG-CT TTTAGGGAAAGCCGA TERM 3771 2244898 - 2244944 + T 100 -19.6 -4.07568 | opp_overlap 2244896 2244899 2244902, overlap 2244899 AGTAATTCATAAACG ACAAGCGGTCGGAATTTGCAGA AAA TTTGCAGAATCCGACCGCTTGC TTTTAGGGAAAGCCG TERM 3772 2244943 - 2244899 - T 100 -18.7 -3.04203 | opp_overlap 2244898 2244899, overlap 2244896 2244902 GTAATTCATAAACGA CAAGCGGTCGGAATTTGCAGA AAA TTTGCAGAATCCGACCGCTTG CTTTTAGGGAAAGCC TERM 3773 2244899 - 2244943 + T 100 -23.1 -3.04398 | opp_overlap 2244899 2244896 2244902, overlap 2244898 GTAATTCATAAACGA CAAGCGGTCGGAATTTGCAGA AAA TTTGCAGAATCCGACCGCTTG CTTTTAGGGAAAGCC TERM 3774 2244940 - 2244902 - T 100 -14.6 -3.65317 | opp_overlap 2244899 2244898, overlap 2244899 2244896 ATTCATAAACGACAA GCGGTCGGAATTTGCAGA AAA TTTGCAGAATCCGACCGC TTGCTTTTAGGGAAA purC 2245821 - 2244964 - | phosphoribosylaminoimidazole-succinocarboxamide synthase TERM 3775 2245450 - 2245468 + g 78 -9.6 -3.60884 | CGGTAATTTTAAGCC GCAAATCG TAC CGGTTTGC TTGTAATCTTTTAAG TERM 3776 2245871 - 2245849 - H 82 -4.2 -5.55769 | opp_overlap 2245869, overlap 2245850 2245863 CTTTAGAACAAAAAA TTAAACGAAT TAT ACTCGTTTAC GCAAACGATTGCGAA TERM 3777 2245870 - 2245850 - H 76 -7.7 -3.92377 | opp_overlap 2245869, overlap 2245849 2245863 TTTAGAACAAAAAAT TAAACGAAT TAT ACTCGTTTA CGCAAACGATTGCGA TERM 3778 2245919 - 2245909 - H 76 -2.6 -5.43866 | overlap 2245910 TAACGGGCAAAAAAA TTTT TTA AAAA ACAGCTTGCAATCTA TERM 3779 2246155 - 2246116 - H 93 -9.4 -4.27617 | opp_overlap 2246123, overlap 2246123 CATATCGCAGCAAAA TACACAACCTCTCGGAAG GCAA CTTTCGAGAGGTTTTTTA TATCCGAAATTTAAA TERM 3780 2246148 - 2246123 - H 91 -11.9 -3.84985 | opp_overlap 2246123, overlap 2246116 CAGCAAAATACACAA CCTCTCGGAAG GCAA CTTTCGAGAGG TTTTTTATATCCGAA TERM 3781 2246123 - 2246148 + H 100 -14.1 -5.36441 | opp_overlap 2246123 2246116 CAGCAAAATACACAA CCTCTCGGAAG GCAA CTTTCGAGAGG TTTTTTATATCCGAA TERM 3782 2246495 - 2246505 + G 71 -8.2 -3.51597 | overlap 2246493 2246503 GTACCTTGGATTTCG GCGG CTG CCGC TTGTCGTTAGCGATT hisG 2246191 - 2247090 + | ATP phosphoribosyltransferase TERM 3783 2247139 - 2247094 - f 90 -11.3 -3.85817 | gap 1 ATGTTGGCTTAGAAA TCTCCCCCTA-GCCCCCTCTTT ATC AAAGAGGGGGAATAAACGGAGA AAGAAAAGCCCCCCT TERM 3784 2247171 - 2247147 - f 100 -10 -5.01553 | overlap 2247149 AACGGAGAAAGAAAA GCCCCCCTCT TTTGT AAAGAGGGGC TGGGGGAGATTTAAA TERM 3785 2247171 - 2247149 - f 78 -10.6 -2.74499 | overlap 2247147 CGGAGAAAGAAAAGC CCCCCTCTTT TGT AAAGAGGGGC TGGGGGAGATTTAAA TERM 3786 2247600 - 2247610 + G 71 -6.8 -4.10161 | overlap 2247594 ATATCCCAGGTGGTT CAGC ACC GCTG TTTTCCACCGTGCTA hisD 2247206 - 2248492 + | histidinol dehydrogenase TERM 3787 2248539 - 2248517 - f 90 -12 -3.37796 | TCCTAGGATCGATAA TCCCAGCCCC GCT GGGGCTGAAA ATTAGAAGATAAAGA TERM 3788 2248569 - 2248553 - f 100 -12.3 -4.31815 | AAATTAGAAGATAAA GAGCCAC AGA GTGGCTC GGATTAAGTAACCCC TERM 3789 2248601 - 2248581 - f 100 -15.5 -3.39895 | GCTCGGATTAAGTAA CCCCATACG ACT CGTATGGGG AGGAAGGAAAATATA hisC 2248616 - 2249668 + | histidinol-phosphate aminotransferase TERM 3790 2249686 - 2249662 - f 85 -8.5 -4.10331 | opp_overlap 2249668, overlap 2249663 GGAAGCAATTAGAAA TGCCTAGCACG AGC CGTGCTAGGTT CCACAATCCCAGCCA TERM 3791 2249685 - 2249663 - f 85 -12 -3.05476 | opp_overlap 2249668, overlap 2249662 GAAGCAATTAGAAAT GCCTAGCACG AGC CGTGCTAGGT TCCACAATCCCAGCC TERM 3792 2249668 - 2249680 + F 72 -9.1 -2.52896 | opp_overlap 2249663 2249662 AATTAGAAATGCCTA GCACG AGC CGTGC TAGGTTCCACAATCC TERM 3793 2249749 - 2249693 - f 100 -16.2 -3.30124 | gap 1, opp_overlap 2249696, overlap 2249730 TGCTAGGTTCCACAA TCCCAGCCACGCTGTGGCTGTTA-ATT AGAT AATATAAGAGCCACAGCGTAGCTCAGA TTAAGTAGCCCCATA TERM 3794 2249696 - 2249712 + F 93 -12.3 -3.38584 | opp_overlap 2249693 TAGGTTCCACAATCC CAGCCAC GCT GTGGCTG TTAATTAGATAATAT TERM 3795 2249746 - 2249730 - f 79 -8.7 -3.81548 | overlap 2249693 AATTAGATAATATAA GAGCCAC AGC GTAGCTC AGATTAAGTAGCCCC TERM 3796 2249927 - 2249917 - g 81 -5.4 -5.1356 | TGTCAGCAACAAAAA TGCA CGT TGCA TCACATAAATGGAAT APL_2022 2249794 - 2250234 + | transposase IS200 TERM 3797 2250266 - 2250226 - f 89 -10.8 -3.65201 | gap 2, opp_overlap 2250235, overlap 2250217 2250235 2250265 GAATATCTCGAACAA GATTTAT--AACCTAGCACG AGC CGTGCTAGGTTCCATAAACC CAGCCACGCTGTGGC TERM 3798 2250235 - 2250255 + F 100 -15.5 -3.05384 | opp_overlap 2250217 2250226 2250235 GAACAAGATTTATAA CCTAGCACG AGC CGTGCTAGG TTCCATAAACCCAGC TERM 3799 2250255 - 2250235 - f 100 -15.5 -3.45032 | opp_overlap 2250235, overlap 2250217 2250226 GAACAAGATTTATAA CCTAGCACG AGC CGTGCTAGG TTCCATAAACCCAGC TERM 3800 2250285 - 2250265 - f 73 -7.5 -3.86897 | opp_overlap 2250266, overlap 2250226 2250266 GCTAGGTTCCATAAA CCCAGCCAC GCT GTGGCTGAT AATTAGATAATATAG TERM 3801 2250284 - 2250266 - f 81 -11 -2.91924 | opp_overlap 2250266, overlap 2250265 CTAGGTTCCATAAAC CCAGCCAC GCT GTGGCTGA TAATTAGATAATATA TERM 3802 2250316 - 2250300 - f 93 -13.7 -3.25147 | opp_overlap 2250297, overlap 2250298 2250296 TAATTAGATAATATA GAGCCGC AGG GCGGCTC GGATTAAGTAGCCCC TERM 3803 2250349 - 2250327 - f 84 -12 -2.77899 | overlap 2250324 GGCTCGGATTAAGTA GCCCCATACG GCT CGTATGGGGG GATCACAGGAGCAAA hisB 2250366 - 2251457 + | imidazole glycerol-phosphate dehydratase/histidinol phosphatase APL_2024 2252274 - 2253059 + | hypothetical protein TERM 3804 2253121 - 2253097 - f 77 -9.3 -3.15841 | overlap 2253095 2253100 ACAATTGTAGGAACA TCAGGGCGAAT GTA ATTCGCCCCTA CAAATGGATTTTAAA TERM 3805 2253118 - 2253100 - f 87 -13.2 -2.77701 | overlap 2253097 2253095 ATTGTAGGAACATCA GGGCGAAT GTA ATTCGCCC CTACAAATGGATTTT hisH 2253185 - 2253775 + | imidazole glycerol phosphate synthase subunit HisH TERM 3806 2253804 - 2253769 - f 77 -9.2 -3.2964 | gap 1, overlap 2253776 AAATTTTGTGGAGAA TATTTAATCCCCATACG AGC CGTATGGGG-CTACATA ATCCGAGCCACGCTG TERM 3807 2253798 - 2253776 - f 89 -12 -3.21726 | overlap 2253769 GTGGAGAATATTTAA TCCCCATACG AGC CGTATGGGGC TACATAATCCGAGCC TERM 3808 2253809 - 2253825 + F 95 -12.3 -3.72576 | opp_overlap 2253806 GGGGCTACATAATCC GAGCCAC GCT GTGGCTC TTTGATACAGCCGCA TERM 3809 2253831 - 2253851 + F 85 -8.9 -4.16842 | opp_overlap 2253806 2253835, overlap 2253832 2253835 GCTGTGGCTCTTTGA TACAGCCGC AGA GCGGCTGAG TTTATTCAGCCTAGC TERM 3810 2253832 - 2253850 + F 80 -10.2 -3.09784 | opp_overlap 2253806 2253835, overlap 2253831 2253835 CTGTGGCTCTTTGAT ACAGCCGC AGA GCGGCTGA GTTTATTCAGCCTAG TERM 3811 2253847 - 2253835 - f 79 -10.5 -2.87132 | opp_overlap 2253832 2253831 2253835, overlap 2253806 TGGCTCTTTGATACA GCCGC AGA GCGGC TGAGTTTATTCAGCC TERM 3812 2253835 - 2253847 + F 78 -10.5 -2.75825 | opp_overlap 2253835 2253806, overlap 2253832 2253831 TGGCTCTTTGATACA GCCGC AGA GCGGC TGAGTTTATTCAGCC hisA 2253896 - 2254648 + | 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase TERM 3813 2255120 - 2255080 - g 79 -7 -4.7254 | overlap 2255081 ACCGGCGATGAAAAA CGCACCC-GCCAAACTAACT GGC AGTT-GCTCGACTGGGTGCA AGAGGTACAAAAACG TERM 3814 2255119 - 2255081 - g 71 -8.3 -3.43042 | overlap 2255080 CCGGCGATGAAAAAC GCACCC-GCCAAACTAACT GGC AGTT-GCTCGACTGGGTGC AAGAGGTACAAAAAC hisF 2254771 - 2255403 + | imidazole glycerol phosphate synthase subunit hisF TERM 3815 2255426 - 2255406 - f 100 -15.5 -3.02829 | opp_overlap 2255406 GATACGTCGTTAATA CCTAGCACG AGC CGTGCTAGG TTCAATAATCCTAGC TERM 3816 2255406 - 2255426 + F 100 -15.5 -3.10715 | opp_overlap 2255406 GATACGTCGTTAATA CCTAGCACG AGC CGTGCTAGG TTCAATAATCCTAGC TERM 3817 2255435 - 2255491 + F 81 -10.1 -3.49951 | opp_overlap 2255435 2255472, overlap 2255437 2255440 TGCTAGGTTCAATAA TCCTAGCCGCTCTGCGGCTGTATATCT GAG AGAAAAAGAGCCACAGAGTGGCTCAGA TTATGTAACCCTATA TERM 3818 2255491 - 2255435 - f 95 -12.3 -3.63515 | opp_overlap 2255435 2255437 2255440, overlap 2255472 TGCTAGGTTCAATAA TCCTAGCCGCTCTGCGGCTGTATATCT GAG AGAAAAAGAGCCACAGAGTGGCTCAGA TTATGTAACCCTATA TERM 3819 2255437 - 2255490 + F 81 -11.1 -2.69649 | gap 1, opp_overlap 2255435 2255472, overlap 2255435 2255440 CTAGGTTCAATAATC CT-AGCCGCTCTGCGGCTGTATATCT GAG AGAAAAAGAGCCACAGAGTGGCTCAG ATTATGTAACCCTAT TERM 3820 2255440 - 2255452 + F 80 -10.5 -3.05022 | opp_overlap 2255435, overlap 2255437 2255435 GGTTCAATAATCCTA GCCGC TCT GCGGC TGTATATCTGAGAGA TERM 3821 2255488 - 2255472 - f 100 -12.3 -4.9792 | opp_overlap 2255437 2255435, overlap 2255435 TATCTGAGAGAAAAA GAGCCAC AGA GTGGCTC AGATTATGTAACCCT TERM 3822 2255520 - 2255500 - f 93 -14.1 -3.11634 | GCTCAGATTATGTAA CCCTATACG GCT CGTATAGGG TAAGGAAAAATATGC hisI 2255532 - 2256176 + | bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein TERM 3823 2256223 - 2256179 - f 95 -8.7 -5.18866 | opp_overlap 2256182 2256191 CTCAAATAAATAAAA CAAGCGGTTGGATTTTGTAAA AAA TTTGCAAAATTTGACCGCTTG AGTATAATGTGCCCC TERM 3824 2256182 - 2256220 + F 93 -13.4 -3.1544 | opp_overlap 2256179, overlap 2256191 AAATAAATAAAACAA GCGGTTGGATTTTGTAAA AAA TTTGCAAAATTTGACCGC TTGAGTATAATGTGC TERM 3825 2256251 - 2256271 + F 95 -6.8 -5.93252 | CCCTCAAAATTGGTT GCCGAGTT CCCTT ACCTCGGC TTTTTTATTTTTAAA APL_2029 2256297 - 2256962 + | hypothetical protein TERM 3826 2256965 - 2257003 + F 79 -4.6 -5.30686 | overlap 2256969 TAAACTGAAATAGTC GTTTGGGGATTATGCT GAAAAAA GGTATAATCCCCTTAC TTTTTTCTGCGTATT TERM 3827 2256969 - 2256999 + F 79 -8.4 -3.99236 | overlap 2256965 CTGAAATAGTCGTTT GGGGATTATGCT GAAAAAA GGTATAATCCCC TTACTTTTTTCTGCG TERM 3828 2257727 - 2257712 - g 74 -4 -5.04249 | gap 1 CGGGTAAAAAAGAAA TCC-GCA ATA TGCCGGA CGGTTGGACGGTGAA map 2257069 - 2257875 + | methionine aminopeptidase TERM 3829 2257883 - 2257922 + T 100 -10.2 -4.62336 | opp_overlap 2257893, overlap 2257893 ACGTTTAATCGTGAT AAATAAAAAATCCACCGT ACAA GCGGTGGATTTTTTATGG TTTTTGCAATGAGAT TERM 3830 2257893 - 2257912 + T 100 -10 -5.47914 | opp_overlap 2257893, overlap 2257883 GTGATAAATAAAAAA TCCACCGT ACAA GCGGTGGA TTTTTTATGGTTTTT TERM 3831 2257912 - 2257893 - T 100 -9.3 -5.72622 | opp_overlap 2257883 2257893 GTGATAAATAAAAAA TCCACCG TACAAG CGGTGGA TTTTTTATGGTTTTT APL_2031 2258436 - 2257942 - | hypothetical protein TERM 3832 2258196 - 2258208 + g 72 -6.3 -4.31688 | opp_overlap 2258205, overlap 2258199 2258205 GATCTTTGTTATCTT TACGT GAA ACGTA TTTTACGTTGATATT scrR 2259488 - 2258469 - | sucrose operon repressor (Scr operon regulatory protein) TERM 3833 2259525 - 2259555 + r 71 -6.8 -4.21393 | opp_overlap 2259529 2259530, overlap 2259521 2259528 2259530 TTCTAATTTTGAAGC GAAAGGGCGCAAGT TTT GCTTGCGCCTATTG TTATTATTTATCTTG TERM 3834 2259528 - 2259552 + r 85 -8.5 -4.18443 | opp_overlap 2259529 2259530, overlap 2259525 2259521 2259530 TAATTTTGAAGCGAA AGGGCGCAAGT TTT GCTTGCGCCTA TTGTTATTATTTATC TERM 3835 2259551 - 2259529 - R 81 -9.1 -3.75897 | opp_overlap 2259528 2259525 2259521 2259530, overlap 2259530 AATTTTGAAGCGAAA GGGCGCAAG TTTTG CTTGCGCCT ATTGTTATTATTTAT TERM 3836 2259530 - 2259550 + r 95 -13.3 -3.66055 | opp_overlap 2259529 2259530, overlap 2259528 2259525 2259521 ATTTTGAAGCGAAAG GGCGCAAGT TTT GCTTGCGCC TATTGTTATTATTTA TERM 3837 2259550 - 2259530 - R 86 -12.6 -2.85056 | opp_overlap 2259530 2259528 2259525 2259521, overlap 2259529 ATTTTGAAGCGAAAG GGCGCAAG TTTTG CTTGCGCC TATTGTTATTATTTA scrB 2260995 - 2259559 - | sucrose-6-phosphate hydrolase (Sucrase) (invertase) TERM 3838 2260923 - 2260944 + g 74 -9.5 -3.29947 | CAGAAAGTACGGTTT GGCGGATTA CGGC TAATTCGCC TTGCTCTGCTGCGTG TERM 3839 2261039 - 2261022 - R 100 -11.3 -5.12707 | opp_overlap 2261022 CTAAATTGCAAAAAA GCGGTGA AATT TCACCGC TTGTTGTGATTATTG TERM 3840 2261022 - 2261039 + r 93 -11.3 -3.92963 | opp_overlap 2261022 CTAAATTGCAAAAAA GCGGTGA AATT TCACCGC TTGTTGTGATTATTG scrK 2261972 - 2261049 - | aminoimidazole riboside kinase TERM 3841 2261236 - 2261252 + g 76 -7.9 -4.17089 | AACGCATCGCCGGCA CCGGTGG TAT CAACCGG TTTTAACGCTTTACC TERM 3842 2261738 - 2261771 + g 77 -4.7 -4.91712 | gap 1, overlap 2261767 CTGTCGAAGTACGTT GTTTCGGATCGAGGAT CAT ATGTTCGGT-CGAAAC TTTTTCTGCATTAAG TERM 3843 2261878 - 2261900 + g 70 -7.6 -3.6284 | ACACCTACCGCAACG TTTGCCGGCG CAC CGCCCGCACA TTTCAAATAGTGATT TERM 3844 2262470 - 2262515 + G 73 -8.9 -3.53811 | gap 1, opp_overlap 2262459, overlap 2262471 AAATGGCGCATGCGG TTGATTTCCACTCCGCCG-CCG CAC CGGACGGCGGGGCGAAAGCCAG TTTAACCGAAATCGG TERM 3845 2262471 - 2262514 + G 74 -10.2 -2.72144 | gap 1, opp_overlap 2262459, overlap 2262470 AATGGCGCATGCGGT TGATTTCCACTCCGCCG-CCG CAC CGGACGGCGGGGCGAAAGCCA GTTTAACCGAAATCG sufI 2262184 - 2263194 + | copper-containing nitrite reductase precursor TERM 3846 2263213 - 2263230 + T 100 -9.9 -4.76312 | opp_overlap 2263213 CCGTTAAATAAAAAA CTCAGCT GAAA AGCTGAG TTTTTGCGTATTATC TERM 3847 2263230 - 2263213 - T 100 -9.9 -5.63517 | opp_overlap 2263213 CCGTTAAATAAAAAA CTCAGCT GAAA AGCTGAG TTTTTGCGTATTATC lolE 2264515 - 2263265 - | outer membrane-specific lipoprotein transporter subunit LolE lolD 2265228 - 2264515 - | lipoprotein-releasing system ATP-binding protein lolD lolC 2266468 - 2265296 - | lipoprotein-releasing system transmembrane protein lolC ldhA 2267543 - 2266593 - | glycerate dehydrogenase TERM 3848 2267595 - 2267558 - R 89 -10.7 -3.54129 | opp_overlap 2267556, overlap 2267559 TAGAGGCTCCTTAAA TTTTTACCACGAGAAGT GATG ACTCCTCGTGGTAATAG GCATTAGTTTGATGT TERM 3849 2267594 - 2267559 - R 93 -14.2 -2.72263 | opp_overlap 2267556, overlap 2267558 AGAGGCTCCTTAAAT TTTTACCACGAGAAGT GATG ACTCCTCGTGGTAATA GGCATTAGTTTGATG kdsA 2268453 - 2267599 - | 2-dehydro-3-deoxyphosphooctonate aldolase APL_2041 2269370 - 2268504 - | hypothetical protein hemK 2270243 - 2269371 - | HemK-like protein TERM 3850 2269509 - 2269539 + g 74 -6.9 -4.28589 | gap 1, opp_overlap 2269509, overlap 2269506 GTGTTCGAGCATTAA CGCACCGTTAT-CT AATA AGTAAAGCGGTGCG TTTTCGATAATTTTT TERM 3851 2270024 - 2270051 + g 71 -9.8 -2.71681 | opp_overlap 2270019 2270020 CTAAAATATACGCCA TCGGCTCGCCCT GCAA ACGGCGAGCCAA TAATTGCGCAAGTTC APL_2043 2270772 - 2270245 - | hypothetical protein TERM 3852 2270400 - 2270416 + g 78 -5.1 -4.98758 | CTTCGTAGTATTTTT GCTCGGT AGT ATTGAGC TTTTTATCCGTTTTT TERM 3853 2270830 - 2270807 - R 100 -14.6 -4.90013 | TAATTTAAGTAAAAA GACGAGGGCG GTTG CGCCCTCATC ACGCTTAAGCCTGCT prfA 2271836 - 2270835 - | peptide chain release factor 1 TERM 3854 2271451 - 2271472 + g 74 -6.6 -4.27467 | TCTTTATATCCGCCT TGTTCGCT TTCGTT AGCGGACA TTTCTTCGATTCTCC TERM 3855 2271767 - 2271794 + g 79 -8.6 -4.21812 | opp_overlap 2271766 2271767 2271769, overlap 2271770 TCCAACGATTGAAAG TAGTCACAACTT CTTC AAGTTGTGAATA TTCTTTTGAATAAGC TERM 3856 2271770 - 2271791 + g 75 -10.3 -2.8165 | opp_overlap 2271769 2271767 2271766, overlap 2271767 AACGATTGAAAGTAG TCACAACTT CTTC AAGTTGTGA ATATTCTTTTGAATA TERM 3857 2271999 - 2272050 + r 100 -14.3 -4.4715 | gap 1, opp_overlap 2271999 2272002 2272005, overlap 2272000 2272002 2272005 GCTTGTAGTAAAAAA TA-ATAAGCGGTTAAATTTTACAA TTTTT TTGTAAAATTTAACCGCTGATATA TTTTGTGAGTTCGGG TERM 3858 2272050 - 2271999 - R 100 -14.3 -5.14563 | gap 1, opp_overlap 2271999 2272000 2272002 2272005, overlap 2272002 2272005 GCTTGTAGTAAAAAA TA-ATAAGCGGTTAAATTTTACAA TTTTT TTGTAAAATTTAACCGCTGATATA TTTTGTGAGTTCGGG TERM 3859 2272000 - 2272048 + r 100 -15 -3.84304 | opp_overlap 2271999 2272002 2272005, overlap 2271999 2272002 2272005 CTTGTAGTAAAAAAT AATAAGCGGTTAAATTTTACAA TTTTT TTGTAAAATTTAACCGCTGATA TATTTTGTGAGTTCG TERM 3860 2272002 - 2272046 + r 100 -17.6 -3.49789 | opp_overlap 2271999 2272002 2272005, overlap 2272000 2271999 2272005 TGTAGTAAAAAATAA TAAGCGGTTAAATTTTACAA TTTTT TTGTAAAATTTAACCGCTGA TATATTTTGTGAGTT TERM 3861 2272046 - 2272002 - R 100 -17.6 -4.67552 | opp_overlap 2272002 2272000 2271999 2272005, overlap 2271999 2272005 TGTAGTAAAAAATAA TAAGCGGTTAAATTTTACAA TTTTT TTGTAAAATTTAACCGCTGA TATATTTTGTGAGTT TERM 3862 2272005 - 2272043 + r 100 -19.3 -2.87772 | opp_overlap 2272002 2271999 2272005, overlap 2272002 2272000 2271999 AGTAAAAAATAATAA GCGGTTAAATTTTACAA TTTTT TTGTAAAATTTAACCGC TGATATATTTTGTGA TERM 3863 2272043 - 2272005 - R 100 -19.3 -4.42047 | opp_overlap 2272005 2272002 2272000 2271999, overlap 2272002 2271999 AGTAAAAAATAATAA GCGGTTAAATTTTACAA TTTTT TTGTAAAATTTAACCGC TGATATATTTTGTGA sseA 2273439 - 2272069 - | thiosulfate sulfurtransferase TERM 3864 2272746 - 2272768 + g 79 -7 -4.58685 | opp_overlap 2272740 2272746 CTGAATAAAGCACAA CGGTTTTATC TTT GGTAATACCG TTTTTCAACAAGTTT TERM 3865 2272940 - 2272950 + g 77 -4.6 -5.07567 | ATTTCTTTACCCGAA TCGG TTT CCGG TTTTTTGCCGTCTAA APL_2046 2274440 - 2273448 - | hypothetical protein TERM 3866 2273564 - 2273548 - G 76 -8 -4.21773 | opp_overlap 2273548 2273547 TGCCAAGAGAAATAA GCGGTA CCGAC TACCGC ATTTGCCATCGTACA