TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.580477 %AT, 3128918 nt, 18697 terms. Intergenic: 0.623251 %AT, H2T: 435073 nt, 3307 terms; T2T: 87071 nt, 2410 terms; H2H: 130472 nt, 1730 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|157690798|ref|NC_009848.1| Bacillus pumilus SAFR-032, complete genome (length 3704465) dnaA 1 - 1341 + | chromosomal replication initiation protein TERM 1 1395 - 1424 + F 79 -7.9 -4.35747 | opp_overlap 1370 1397 1399, overlap 1397 1413 TAGAGCATAGTCATA CACAGTCTGTCCA CATG TGGATAGGCTGTC TTTCCTTTCTTTTTA TERM 2 1397 - 1422 + F 83 -10.5 -3.73447 | opp_overlap 1370 1397 1399, overlap 1395 1413 GAGCATAGTCATACA CAGTCTGTCCA CATG TGGATAGGCTG TCTTTCCTTTCTTTT dnaN 1409 - 2674 + | DNA polymerase III subunit beta TERM 3 2689 - 2712 + F 91 -9.6 -4.86902 | opp_overlap 2689 2687 ATTCAATCTAAAATA GCTGCTGTGT GAGT GCATAGCAGC TTTTCTTCTCGTTTA yaaA 2801 - 3040 + | hypothetical protein recF 3057 - 4169 + | recombination protein F yaaB 4178 - 4432 + | hypothetical protein gyrB 4478 - 6406 + | DNA gyrase subunit B TERM 4 6425 - 6454 + F 89 -10.2 -4.57569 | opp_overlap 6425 6428 GCTCCCTACTGAGAA CAACCTTATTTC TTGTTT GGAATAAGGTTG TTTTTCAAGAAATAG gyrA 6639 - 9158 + | DNA gyrase subunit A TERM 5 9186 - 9161 - f 95 -12 -4.28361 | opp_overlap 9161, overlap 9165 GCAATCTGAGTAAAA TAAAGCCGGT TTTTTC ACCGGCTTTA TTTTTTTTGAAAAAA TERM 6 9161 - 9186 + F 100 -12 -5.75342 | opp_overlap 9161 9165 GCAATCTGAGTAAAA TAAAGCCGGT TTTTTC ACCGGCTTTA TTTTTTTTGAAAAAA TERM 7 9182 - 9165 - f 87 -8.4 -4.72007 | opp_overlap 9161, overlap 9161 TCTGAGTAAAATAAA GCCGGT TTTTTC ACCGGC TTTATTTTTTTTGAA TERM 8 9336 - 9305 - f 77 -6.2 -4.7254 | gap 1, opp_overlap 9326, overlap 9306 9325 ATTCCCCAGTAAAAA CTTCTTAGAAAAACA AAA TGTTTTT-TAAGAAA AATGTTGACTGTTGA TERM 9 9657 - 9644 - f 73 -8.1 -3.68988 | GTCGAGCGAACAGAA GGGAG CTTG CTCCC GGATGTTAGCGGCGG TERM 10 9733 - 9718 - f 79 -10.4 -3.33315 | opp_overlap 9708, overlap 9728 GTAAGACTGGGATAA CTCCGG GAAA CCGGAG CTAATACCGGATAGT TERM 11 10051 - 10030 - f 81 -9.5 -3.97307 | gap 1 GTTAGGGAAGAACAA GTGCGAG-AG TAA CTGCTCGCAC CTTGACGGTACCTAA TERM 12 10203 - 10185 - f 74 -10.2 -2.75963 | overlap 10184 AGTCTGATGTGAAAG CCCCCGGC TCA ACCGGGGA GGGTCATTGGAAACT TERM 13 11594 - 11575 - f 90 -12.2 -3.66803 | opp_overlap 11574 11573 CGGGAACAGCCCAAA CCAAGAGG CTTG CCTCTTGG GGTTGTAGGACACTC TERM 14 13132 - 13119 - f 71 -4.5 -4.7254 | ACTGTTTAGCAAAAA CACAG GTCT CTGCG AAGCCGTAAGGCGAA TERM 15 14440 - 14417 - f 71 -9.6 -2.58579 | opp_overlap 14417, overlap 14416 14419 CCAAGCTTCTATAAG GATCAGTTCC ATTT GGAACTGGTC TTTTTTGTTTTTTAA TERM 16 14417 - 14440 + F 100 -11.8 -6.04324 | opp_overlap 14417 14416 14419 CCAAGCTTCTATAAG GATCAGTTCC ATTT GGAACTGGTC TTTTTTGTTTTTTAA csfB 14579 - 14770 + | hypothetical protein TERM 17 14770 - 14784 + F 86 -5.7 -5.626 | opp_overlap 14772 GCCTTTGTATTCATA GACCA CTAGA TGGTC TTTTTTTATGAGCTA xpaC 14900 - 15514 + | 5-bromo-4-chloroindolyl phosphate hydrolysis protein yaaN 15726 - 16592 + | toxic anion resistance protein TelA TERM 18 16740 - 16759 + G 87 -6.4 -5.14563 | CTTTTCACGTTCCAG GACATCAC AATG GAGATGTC TTTTTTGATGAGGCA yaaO 16670 - 18079 + | arginine/lysine/ornithine decarboxylase tmk 18076 - 18714 + | thymidylate kinase yaaQ 18794 - 19123 + | hypothetical protein yaaR 19136 - 19576 + | hypothetical protein TERM 19 19620 - 19642 + G 82 -6.9 -4.8083 | overlap 19621 TGACATGAATGATTT GCAGCCGCG CGTCA TGCGGCTGA TTTTTAATAGTATTG TERM 20 19621 - 19641 + G 80 -10.4 -3.47413 | overlap 19620 GACATGAATGATTTG CAGCCGCG CGTCA TGCGGCTG ATTTTTAATAGTATT holB 19588 - 20577 + | DNA polymerase III subunit delta' yaaT 20580 - 21407 + | signal peptidase II yabA 21422 - 21775 + | DNA replication intiation control protein YabA TERM 21 21809 - 21773 - f 100 -13.3 -5.63517 | gap 1, opp_overlap 21781 TTTTTAAATAAAAAA TGAGAAAAGGCTTCCG CTGAAT CGGAAGCCTTTT-TCA CAGGAAAAGAAAGGA TERM 22 21781 - 21802 + F 100 -11.6 -4.56597 | opp_overlap 21773 TAAAAAATGAGAAAA GGCTTCCG CTGAAT CGGAAGCC TTTTTCACAGGAAAA TERM 23 22010 - 21998 - g 72 -7.7 -3.83026 | opp_overlap 21994 21990 21998 TCTTTGTACAGGAAA TGGCA TTG TGCCA TTGCTGCTTTCGACT yabB 21831 - 22574 + | O-methyltransferase yazA 22561 - 22857 + | endonuclease TERM 24 23117 - 23098 - g 100 -7.8 -5.43514 | opp_overlap 23097 AAAAGAAGGAAAAAA CATCGCAC TTGT GAGCGATG CTGGTTTACCGACGA yabC 22835 - 23713 + | methyltransferase TERM 25 23750 - 23711 - T 100 -13.3 -3.71487 | gap 1, opp_overlap 23719, overlap 23719 TATCATATTGAACAA TAAAGAAAGGTTCTTGCA AACGG TGCAAGAACCTTT-TTTA TATCAAACTTATTTT TERM 26 23719 - 23743 + T 100 -13 -5.36441 | opp_overlap 23711 23719 TGAACAATAAAGAAA GGTTCTTGCA AACGG TGCAAGAACC TTTTTTATATCAAAC TERM 27 23743 - 23719 - T 100 -13 -4.78597 | opp_overlap 23719, overlap 23711 TGAACAATAAAGAAA GGTTCTTGCA AACGG TGCAAGAACC TTTTTTATATCAAAC BPUM_0021 24043 - 23759 - | transcriptional regulator TERM 28 24349 - 24362 + H 89 -6.7 -5.40072 | opp_overlap 24337 24336 24334 24348 TATTCGACAAAATGT CGACA GGTT TGTCG TTTTTTTCGAAAAAC TERM 29 24514 - 24534 + H 91 -11.1 -4.70879 | TAATGATAATAACCG CTCTCGTCC ATT GGGCGGGAG TTTTTGACATTTACA TERM 30 24761 - 24745 - g 89 -6.6 -5.28778 | AGCACGGACAAAAAA TTCAGC AAAAA GCTGAA GAACAAAACATCACA TERM 31 26050 - 26023 - g 74 -6.4 -4.43221 | gap 1, overlap 26014 AAACACCTGAGAAAA TCTTCTTCCA-GC TTG GCATTGAAGAAGA AAAGCTTAAAAGCTG metG 24570 - 26570 + | methionyl-tRNA synthetase TERM 32 26580 - 26612 + F 82 -4.9 -5.42198 | opp_overlap 26580 TTATAAATCAACAAA GGTGTTCCACG TGTAACCATTT CGTCGAACACC TTTTGTTTTTTAGAA yabD 26653 - 27420 + | TatD deoxyribonuclease yabE 27665 - 28867 + | hypothetical protein TERM 33 28891 - 28913 + F 100 -6.3 -5.68023 | opp_overlap 28891 AATCATTTATATGAA CAGAGGG CTTTGCGCA CCCTCTG TTTTTTTGGTTATAA rnmV 29028 - 29588 + | ribonuclease M5 TERM 34 30026 - 30012 - g 77 -6.4 -4.63218 | GCTGCTTGAAGAAAA CCTTCC ATT GAAAGG GATTGTGGTCATGCT ksgA 29581 - 30459 + | dimethyladenosine transferase TERM 35 30440 - 30471 + F 77 -6.7 -4.59853 | opp_overlap 30448, overlap 30448 GTTTGTCGAATGTTT TACAAAAAGCCCT GTTTTA AGGGCTTTTTTTG TTTTTCACCACTTCG TERM 36 30463 - 30448 - f 77 -6.1 -4.84017 | opp_overlap 30440 30448 AATGTTTTACAAAAA GCCCT GTTTTA AGGGC TTTTTTTGTTTTTCA TERM 37 30448 - 30463 + F 100 -6.1 -6.20267 | opp_overlap 30448, overlap 30440 AATGTTTTACAAAAA GCCCT GTTTTA AGGGC TTTTTTTGTTTTTCA yabG 30590 - 31474 + | sporulation-specific U57 family peptidase TERM 38 31475 - 31494 + F 100 -7.8 -6.10295 | opp_overlap 31475 CATGAATCGACATAA CCCGACTG ATTT CAGTCTGG TTTTTTTTATGTTCA TERM 39 31494 - 31475 - f 70 -7.8 -3.55814 | opp_overlap 31475 CATGAATCGACATAA CCCGACTG ATTT CAGTCTGG TTTTTTTTATGTTCA veg 31688 - 31945 + | hypothetical protein TERM 40 31949 - 31971 + F 100 -8.5 -5.49568 | GTCGCCTATTAATGG GCAGTGAAC TTTTT GTTTACTGC TTTTTGTTTTGCCTT TERM 41 32072 - 32056 - f 90 -9.4 -4.73973 | opp_overlap 32054 ATACAAAATAAGAAA GCCACC CAAGC GGTGGC ACTGATTCGAATTCT sspF 32109 - 32294 + | small acid-soluble spore protein F TERM 42 32302 - 32328 + F 100 -11.6 -5.52384 | opp_overlap 32302, overlap 32324 AACGATAGAAAAACG GTCAGGGATACC TCA GGTGTCTCTGGC TTTTTTTGATGAAAA ispE 32441 - 33310 + | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase purR 33366 - 34199 + | purine operon repressor yabJ 34236 - 34613 + | hypothetical protein TERM 43 34662 - 34678 + F 100 -9.5 -5.40072 | opp_overlap 34662 TCATATGCAGGAAAA GACATCA TCA TGATGTC TTTTTTTCGCGAAGA TERM 44 34678 - 34662 - f 85 -9.5 -4.29738 | opp_overlap 34662 TCATATGCAGGAAAA GACATCA TCA TGATGTC TTTTTTTCGCGAAGA spoVG 34839 - 35135 + | regulatory protein SpoVG TERM 45 35155 - 35198 + F 81 -5.7 -5.32608 | gap 2, opp_overlap 35155 ATGTGAACCTAAAAA GACAGC--TTTAAGAGAAAAT GAAT GTTTTCTTTTAAAATGCTGTC TTTTTTGCGTTTTTT gcaD 35305 - 36705 + | UDP-N-acetylglucosamine pyrophosphorylase prs 36728 - 37681 + | ribose-phosphate pyrophosphokinase TERM 46 37687 - 37733 + F 91 -13.3 -2.72463 | gap 1, opp_overlap 37682 37698 37700, overlap 37698 TTTTAGCTAATTTTC TGATTG-AAAAAGGCCCTAAGC ATCC GCTTGGGGTCTTTTTGCTATCA TCATTCACGGTAAAT TERM 47 37698 - 37721 + F 91 -11 -4.82667 | opp_overlap 37698 37700, overlap 37687 TTTCTGATTGAAAAA GGCCCTAAGC ATCC GCTTGGGGTC TTTTTGCTATCATCA TERM 48 37721 - 37698 - f 77 -6.6 -4.65895 | opp_overlap 37687 37698, overlap 37700 TTTCTGATTGAAAAA GGCCCTAAGC ATCC GCTTGGGGTC TTTTTGCTATCATCA TERM 49 38042 - 38026 - g 85 -7.3 -4.88405 | AACGGTGAAACAAAA TCCGTGA TGG TCACAGA ATTACAAACAGACCC ctc 37819 - 38445 + | 50S ribosomal protein L25/general stress protein Ctc TERM 50 38459 - 38483 + F 80 -7.9 -4.46926 | opp_overlap 38461 AACTGGTCATTTAGA GACGTAACC CTCCCGC GGTTGCGTC TTTTGTGCTAGAATG TERM 51 38521 - 38541 + F 85 -6.9 -5.04385 | opp_overlap 38524 TTCATACGTTTTACA TGAGGCAAT CCT ATTGGCTCA TTTTTTAGGCGTGTG TERM 52 38647 - 38637 - g 73 -5.4 -4.71318 | opp_overlap 38637 AATATGAAAAAACAA GACA TAA TGTC GGTTTTATGACAATA TERM 53 38692 - 38681 - g 85 -5.8 -5.12617 | opp_overlap 38681 GAATTATCGAAAAAA TGGG ACAT CCCA TTAAATCAATCAAAG TERM 54 39096 - 39112 + G 73 -5.1 -4.60487 | overlap 39097 TCGAAGCTTGTGAGG CGGCTTT AAC AAAGCCA TTTTTAGAAGTGATG spoVC 38585 - 39151 + | peptidyl-tRNA hydrolase yabK 39207 - 39437 + | hypothetical protein TERM 55 39440 - 39468 + F 79 -4.6 -5.28983 | opp_overlap 39441, overlap 39441 CTTTATTCAATAAAA AGCTTTGGTGTA GATAA TAGACCAAAGCG TTTTTCTGTTTTAAA TERM 56 39467 - 39441 - f 91 -8.1 -5.10461 | opp_overlap 39440 39441 TTTATTCAATAAAAA GCTTTGGTGTA GATAA TAGACCAAAGC GTTTTTCTGTTTTAA TERM 57 39441 - 39467 + F 75 -8.1 -3.75763 | opp_overlap 39441, overlap 39440 TTTATTCAATAAAAA GCTTTGGTGTA GATAA TAGACCAAAGC GTTTTTCTGTTTTAA TERM 58 41252 - 41242 - g 78 -2.4 -5.4505 | CGTGTGAAGAAAAAA GTGG AGT CCTC TGTACAGGACATCGC mfd 39505 - 43038 + | transcription-repair coupling factor spoVT 43178 - 43714 + | stage V sporulation protein T TERM 59 43753 - 43782 + F 100 -10.1 -5.71712 | opp_overlap 43753 43754, overlap 43754 GATAAAACGAAAGAA TGCCGATGAAATC ATTT GATTTTGTCGGCG TTTTTTTATATGGGA TERM 60 43754 - 43781 + F 90 -11.4 -4.01943 | opp_overlap 43754 43753, overlap 43753 ATAAAACGAAAGAAT GCCGATGAAATC ATTT GATTTTGTCGGC GTTTTTTTATATGGG TERM 61 45385 - 45396 + G 73 -3.6 -5.03405 | ACGTCAGTTTTTATT GGTG GTTT CGCC TTTTTATATAGTATT yabM 43909 - 45513 + | MOP superfamily multidrug/oligosaccharidyl-lipid/polysaccharide flippase transporter yabN 45503 - 46987 + | tetrapyrrole methyltransferase family protein yabO 46984 - 47244 + | S4 RNA-binding domain-containing protein yabP 47319 - 47627 + | hypothetical protein TERM 62 48162 - 48172 + G 74 -4 -4.96848 | AAAAATGGCGAACAT CAAT GAG ATTG TTTTTCTCTAAAGGA yabQ 47624 - 48262 + | hypothetical protein divIC 48281 - 48655 + | cell-division initiation protein yabR 48738 - 49136 + | hypothetical protein TERM 63 49192 - 49172 - f 73 -6.8 -4.30987 | opp_overlap 49173, overlap 49173 ATCTTTCACAACAAA GCACCTGC TGTCC GCAGGTGT TTTTTTCTTAATTCA TERM 64 49173 - 49191 + F 100 -10.3 -5.87996 | opp_overlap 49172 49173 TCTTTCACAACAAAG CACCTGC TGTCC GCAGGTG TTTTTTTCTTAATTC TERM 65 49191 - 49173 - f 78 -10.3 -3.1811 | opp_overlap 49173, overlap 49172 TCTTTCACAACAAAG CACCTGC TGTCC GCAGGTG TTTTTTTCTTAATTC TERM 66 49287 - 49302 + F 81 -5.4 -5.18726 | TTGTATTATAGATCT TGTGCT TCTT AGCGCA TTTTTATTATGGCGG TERM 67 49515 - 49495 - f 85 -9.8 -4.09685 | opp_overlap 49495 GGTCATCTTCGAAAA CAGCTTTC TTTAG GAAAGCTG TTTTTTTTGTGTCTT TERM 68 49495 - 49515 + F 100 -10.5 -6.08563 | opp_overlap 49495 GGTCATCTTCGAAAA CAGCTTTCT TTA GGAAAGCTG TTTTTTTTGTGTCTT spoIIE 49690 - 52173 + | phosphoprotein phosphatase yabS 52250 - 52984 + | hypothetical protein TERM 69 53232 - 53252 + G 74 -6.1 -4.57353 | GATGCGATTTATCCC GGCATGCTT CAA AAGCGTTCC TTTTATGTGATGGAG TERM 70 53816 - 53804 - g 86 -3.3 -5.63374 | GCAACAGCAAAAAAA TGGAC AAA GGCCA GCTGGTCAACAAAAC yabT 52968 - 53975 + | serine/threonine protein kinase TERM 71 55342 - 55320 - g 76 -2.7 -5.28176 | overlap 55321 TTTATTGATAAAAAA GTGCCTCTT GCAGA AAGAGACAG CTGGCCGATCGTCAC tilS 54072 - 55475 + | tRNA(Ile)-lysidine synthase hprT 55491 - 56030 + | hypoxanthine phosphoribosyltransferase TERM 72 56140 - 56150 + G 87 -5.4 -5.42131 | AATGAATCGGGTTTT TCGT AAT ACGA TTTTTTATATACTTA TERM 73 56843 - 56856 + G 71 -6.7 -4.16016 | GTCGGTGTCGGTGCA TCACG TGTA CGTGA TTTATTCGAAAATGC TERM 74 57077 - 57087 + G 71 -6.8 -4.11394 | GATCCTGCATTGCTG CGTC CGG GACG TTTTGACCGTCAAAT TERM 75 57270 - 57254 - g 70 -8 -3.5782 | overlap 57250 AACTTACTAAACGAA GCAGCA CTTGT TGCTGC CCGTCATAACAAAAA TERM 76 57849 - 57837 - g 74 -6.3 -4.42464 | overlap 57825 AACGTGCGAAACAAA TTCTC ACT GAGAA TAAAGATAAGTTAGA TERM 77 57947 - 57933 - g 73 -8.6 -3.73072 | AATCTCTTTACGAAA CTGGAA AGC TTCCAG AGCGTGTATACGCAG ftsH 56126 - 58030 + | M41 family endopeptidase FtsH TERM 78 58038 - 58010 - f 84 -4.6 -5.54885 | opp_overlap 58021, overlap 58021 AACATCAAGAAAAAA GAAGAAGACGAG GAGAT CTAATCTCCTTC TGTGAAAGCTGCCGG TERM 79 58021 - 58035 + F 74 -8.6 -3.48924 | opp_overlap 58021 58010 AAAAGAAGAAGACGA GGAGAT CTA ATCTCC TTCTGTGAAAGCTGC TERM 80 58066 - 58046 - f 100 -14 -3.53012 | opp_overlap 58046 TCTCCTTCTGTGAAA GCTGCCGG GATCA CCGGCAGC TTTTTTTTATTTCAA TERM 81 58046 - 58066 + F 100 -14 -6.23545 | opp_overlap 58046 TCTCCTTCTGTGAAA GCTGCCGG GATCA CCGGCAGC TTTTTTTTATTTCAA TERM 82 58527 - 58550 + G 76 -10.4 -2.91276 | gap 1, opp_overlap 58525, overlap 58526 GGGGCTGATCGAATT GTGAAT-GCCG TAG CGGCGATTCAC CTTTATGGGGCACCG TERM 83 58752 - 58742 - g 71 -3.2 -5.0133 | CATTGTTGGAAAAAA CACC ATT AGTG CGATGCAATCTGGCA yacB 58188 - 58970 + | pantothenate kinase TERM 84 59136 - 59122 - g 75 -8.6 -3.79906 | CGATTGGCAGAACAA TGACTG CCA CAGTCA TGATGGGTGCTATGC hslO 58986 - 59861 + | Hsp33-like chaperonin TERM 85 59854 - 59876 + F 79 -4.9 -5.27023 | gap 2, opp_overlap 59854 TACGTGAAGAAATAA CCCGCTAAGCT CTA AGC--AGCGGG TTTTCTTTTTAGAAT TERM 86 60598 - 60583 - g 70 -7.6 -3.64198 | GCCCTATACATACAA GAAGCT CAAA AGCTTC AGCCAGATGAATGGA yacD 59908 - 60816 + | peptidylprolyl isomerase cysK 60894 - 61817 + | cysteine synthase TERM 87 61843 - 61826 - f 91 -12.7 -2.91027 | opp_overlap 61826, overlap 61823 CGATTAAACCAATTA CCCCAGC ATTT GCTGGGG TTTTTTTATGAAATT TERM 88 61826 - 61843 + F 100 -12.7 -5.63504 | opp_overlap 61823 61826 CGATTAAACCAATTA CCCCAGC ATTT GCTGGGG TTTTTTTATGAAATT pabB 61942 - 63360 + | anthranilate synthase component I pabA 63374 - 63967 + | para-aminobenzoate/anthranilate synthase glutamine amidotransferase component II TERM 89 63996 - 64019 + G 93 -9.7 -4.33708 | opp_overlap 63996 CGGTCAGTATATAGA GGAGAAAGA CGCGAC TCTTTCTCC TTTTGATCATGGTTT TERM 90 64019 - 63996 - g 73 -9.7 -3.02471 | opp_overlap 63996 CGGTCAGTATATAGA GGAGAAAGA CGCGAC TCTTTCTCC TTTTGATCATGGTTT TERM 91 64213 - 64203 - g 82 -4.6 -5.33405 | overlap 64206 TTTACTAAATAAAAA CGAC ATA GCCG GCGGTCATGCGAGAA pabC 63964 - 64812 + | 4-amino-4-deoxychorismate lyase TERM 92 65132 - 65114 - g 71 -4.6 -4.60713 | opp_overlap 65117, overlap 65117 GAAAAGATCACAAAA GAATTGGA TGT TCCAATTT CTATTGATACGTATA TERM 93 65129 - 65117 - g 72 -6.3 -4.37552 | opp_overlap 65117, overlap 65114 AAGATCACAAAAGAA TTGGA TGT TCCAA TTTCTATTGATACGT sul 64823 - 65680 + | dihydropteroate synthase TERM 94 65827 - 65803 - g 74 -7.9 -3.91072 | opp_overlap 65804, overlap 65793 65804 GTAAAGCCGGACAAA CTGATGACCTC AAT GAGACCATCAA TTATGCGGAGCTCTA TERM 95 65826 - 65804 - g 71 -9.2 -2.94161 | opp_overlap 65804, overlap 65803 65793 TAAAGCCGGACAAAC TGATGACCTC AAT GAGACCATCA ATTATGCGGAGCTCT folB 65697 - 66035 + | dihydroneopterin aldolase TERM 96 66137 - 66110 - gf 71 -3.4 -5.03145 | GAAGCCGTCAAAAAA CTACACGAACAT CCAG AGGTTCAAGTAG AATCGATCTCTTCTA folK 66032 - 66535 + | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase yazB 66487 - 66720 + | transcriptional regulator yacF 66713 - 67714 + | dihydrouridine synthase TERM 97 67739 - 67760 + F 85 -7.3 -5.10601 | overlap 67757 TCTTTTTGTAGCTCA CTGCTAGTG CATG TACTGGCAG TTTTTCTGCTTTTCT TERM 98 67757 - 67769 + F 70 -4.8 -4.52857 | overlap 67739 CTAGTGCATGTACTG GCAG TTTTT CTGC TTTTCTCTGCAAAAT TERM 99 68441 - 68415 - g 70 -8 -3.69621 | opp_overlap 68438 ACCTAGAAGTTGAAA CACCAACAATGC ACA GCATCCCTGGTG GTGCATCAGCACGTC TERM 100 68900 - 68884 - g 75 -5.2 -4.84363 | opp_overlap 68886 TGAAATTACGAAAAA TATGAC GGTAG GTCATA TCATCAATGAGTTCT lysS 67805 - 69304 + | lysyl-tRNA synthetase TERM 101 69343 - 69313 - f 70 -8.4 -3.37493 | opp_overlap 69318, overlap 69318 CCGCTAATACACCAA TTAAAGCGCCAT TTTAACT ATGGCGCTTTCA GCTTGTAGACAAAGT TERM 102 69338 - 69318 - f 77 -8.3 -3.99955 | opp_overlap 69318, overlap 69313 AATACACCAATTAAA GCGCCAT TTTAACT ATGGCGC TTTCAGCTTGTAGAC TERM 103 69318 - 69338 + F 73 -8.3 -3.69354 | opp_overlap 69313 69318 AATACACCAATTAAA GCGCCAT TTTAACT ATGGCGC TTTCAGCTTGTAGAC TERM 104 69344 - 69366 + F 100 -15 -5.39721 | ACTATGGCGCTTTCA GCTTGTAGAC AAA GTCTACAAGC TTTTTTGTATAATAA TERM 105 69834 - 69821 - f 75 -3.1 -5.18357 | gap 1, overlap 69822 GAAGCGATGAAAAAA GGGCTC GTT GA-CCC GTCTATCGCCTTCAT TERM 106 70044 - 70020 - f 91 -9.3 -5.02645 | overlap 70024 AAGAAACAAAAGAAA TCAAGGTCAGT ACA ACTGACCCAGA GAGTGGCTATTATGT TERM 107 70040 - 70024 - f 84 -10.9 -3.85719 | overlap 70020 AACAAAAGAAATCAA GGTCAGT ACA ACTGACC CAGAGAGTGGCTATT TERM 108 70377 - 70394 + F 81 -9.9 -3.73859 | ATTTTGATTGTTACA TTTGCCC CAAC GGGCAAA TTCTCTCTTATCGTA TERM 109 70652 - 70642 - f 78 -5.4 -5.10933 | GGATGCAAAAGAAAA GCAT GGT ATGC GTTGGACGAAACTTC TERM 110 70763 - 70738 - f 100 -13.4 -3.98747 | TAAAAAACTAGCAAA CTGGACATGG AAAGTA CCATGTCCAG CGTAAAACACATGAT TERM 111 70840 - 70794 - f 93 -4.7 -5.75342 | gap 2, opp_overlap 70802, overlap 70802 GTTTTTCAAAAAAAA TGT-GA-AAACCCCACTTTTACT TGA AGTAAAGGTAGGGTTTGTCTACG GTCTGAAAGCGCCAT TERM 112 70802 - 70830 + F 86 -11.1 -4.05747 | opp_overlap 70802 70794 AAAAAAATGTGAAAA CCCCACTTTTACT TGA AGTAAAGGTAGGG TTTGTCTACGGTCTG TERM 113 70830 - 70802 - f 88 -11.1 -4.35095 | opp_overlap 70802, overlap 70794 AAAAAAATGTGAAAA CCCCACTTTTACT TGA AGTAAAGGTAGGG TTTGTCTACGGTCTG TERM 114 70869 - 70849 - f 71 -8.3 -3.54424 | opp_overlap 70849 GTCTACGGTCTGAAA GCGCCAT TTTAACT ATGGCGC TTTTTATTTTTCATG TERM 115 70849 - 70869 + F 100 -8.3 -5.65496 | opp_overlap 70849 GTCTACGGTCTGAAA GCGCCAT TTTAACT ATGGCGC TTTTTATTTTTCATG TERM 116 70877 - 70893 + G 75 -2.3 -5.40072 | overlap 70878 TATGGCGCTTTTTAT TTTTCAT GAA ATGAAAC TTTTTTTAAAAAAAC BPUM_0067 70863 - 70973 + | hypothetical protein TERM 117 71134 - 71115 - f 79 -5 -5.24531 | overlap 71116 AGTTTTTATAAAAAA TCCTATGA TGTT TCATAGGT AGTCAGTCAAACGCT TERM 118 71133 - 71116 - f 75 -8.5 -3.73995 | overlap 71115 GTTTTTATAAAAAAT CCTATGA TGTT TCATAGG TAGTCAGTCAAACGC TERM 119 71174 - 71159 - f 77 -6.2 -4.73388 | opp_overlap 71159 71157 AACGCTGACGAAAAA CAAAAC TTCG GTTTTG TACTTTTTCGGAGAG TERM 120 71267 - 71254 - f 73 -8.1 -3.68988 | GTCGAGCGAACAGAA GGGAG CTTG CTCCC GGATGTTAGCGGCGG TERM 121 71343 - 71328 - f 79 -10.4 -3.33315 | opp_overlap 71318, overlap 71338 GTAAGACTGGGATAA CTCCGG GAAA CCGGAG CTAATACCGGATAGT TERM 122 71661 - 71640 - f 81 -9.5 -3.97307 | gap 1 GTTAGGGAAGAACAA GTGCGAG-AG TAA CTGCTCGCAC CTTGACGGTACCTAA TERM 123 71813 - 71795 - f 74 -10.2 -2.75963 | overlap 71794 AGTCTGATGTGAAAG CCCCCGGC TCA ACCGGGGA GGGTCATTGGAAACT TERM 124 73204 - 73185 - f 90 -12.2 -3.66803 | opp_overlap 73184 73183 CGGGAACAGCCCAAA CCAAGAGG CTTG CCTCTTGG GGTTGTAGGACACTC TERM 125 74742 - 74729 - f 71 -4.5 -4.7254 | ACTGTTTAGCAAAAA CACAG GTCT CTGCG AAGCCGTAAGGCGAA TERM 126 76050 - 76027 - f 71 -9.6 -2.58579 | opp_overlap 76027, overlap 76026 76029 CCAAGCTTGTATAAG GATCAGTTCC ATTT GGAACTGGTC TTTTTGTGTTTTTAA TERM 127 76027 - 76050 + F 100 -11.8 -5.36364 | opp_overlap 76026 76027 76029 CCAAGCTTGTATAAG GATCAGTTCC ATTT GGAACTGGTC TTTTTGTGTTTTTAA ctsR 76194 - 76658 + | transcriptional regulator CtsR TERM 128 76771 - 76749 - g 78 -5.7 -4.80417 | gap 1 GAGAAAAACAAGAAA TGCACATATG TGAA CA-ATGTGCA AAAGAAAACAGTGAT mcsA 76664 - 77230 + | transcriptional regulator mcsB 77235 - 78326 + | ATP:guanido phosphotransferase TERM 129 78947 - 78931 - g 84 -2.9 -5.68489 | CAGAAGAACAAAAAA CAACCCG GTG CTGATTG GTGAGCCTGGTGTTG clpC 78323 - 80758 + | class III stress response-related ATPase TERM 130 80776 - 80806 + F 83 -9.1 -4.23244 | gap 1, opp_overlap 80774 80775 80776 TAGTAAGACAAAAGT GTGAGGCATACCAG TAAG CTG-TATGCCTCCC TTTACTTATTTTCTG radA 80912 - 82231 + | DNA repair protein RadA TERM 131 82271 - 82252 - g 82 -2 -5.69068 | opp_overlap 82253 82259, overlap 82253 82256 GAAAAAGAGAAAAAA GGAGCGAG AGAA CTCGATCT CTTAGATATCGTACA disA 82234 - 83313 + | DNA integrity scanning protein DisA yacL 83467 - 84567 + | hypothetical protein TERM 132 84782 - 84800 + G 70 -7.4 -3.80625 | opp_overlap 84782, overlap 84785 AGGCTTCTCAAGGTA CACGCGTT TCA AACGCCTG TTTCACTTGTCAACG TERM 133 85041 - 85068 + G 82 -8.5 -4.38129 | CCATTGAACGTCAGA GCTTGTGGG CAGTCCAGAC CCCACAAGC TTTTCGTCATTCTAT ispD 84581 - 85270 + | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ispF 85274 - 85750 + | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase TERM 134 85766 - 85753 - f 74 -5.3 -4.82678 | opp_overlap 85752 85753 TCAGAAAAAGTAAAA CTCAT TTTG ATGAG AATGAGATTTGATGA gltX 85845 - 87296 + | glutamyl-tRNA synthetase TERM 135 87411 - 87393 - f 71 -9.6 -2.64472 | overlap 87389 GACGTTGGAAATGCA CCCTCAAG ACC CTTGAGGA ACACGAGTACGTAAG TERM 136 87541 - 87518 - f 71 -6.6 -4.07687 | opp_overlap 87507 87518 ACCGCGTTTTCAAAA CGTCTCTGTC ATAT GGCAGAGGCG TTTTTTATTTGTCCA TERM 137 87518 - 87541 + F 100 -11 -5.72622 | opp_overlap 87518, overlap 87507 ACCGCGTTTTCAAAA CGTCTCTGTC ATAT GGCAGAGGCG TTTTTTATTTGTCCA cysE 87608 - 88261 + | serine O-acetyltransferase cysS 88258 - 89658 + | cysteinyl-tRNA synthetase TERM 138 89936 - 89920 - g 78 -7.3 -4.42851 | GGAAGAAATGCAAAA TCAGGCA CAG TGCCTAA AAACACAGACGTTCA yazC 89662 - 90093 + | ribonuclease III yacO 90077 - 90826 + | tRNA/rRNA methyltransferase yacP 90829 - 91341 + | hypothetical protein sigH 91405 - 92061 + | RNA polymerase factor sigma-70 rpmGB 92138 - 92287 + | 50S ribosomal protein L33 TERM 139 92402 - 92391 - g 81 -4.4 -5.27335 | opp_overlap 92396, overlap 92396 CTGGCCAAAGAAAAA CGAA ATGA TTCG TTACACAATCACTGT secE 92323 - 92499 + | preprotein translocase subunit SecE TERM 140 92560 - 92572 + F 100 -9.1 -5.1848 | opp_overlap 92560 TGACTTGCCAAAAAA CCCGT TTT ACGGG TTTTTTCAATTGCTT TERM 141 92572 - 92560 - f 91 -9.1 -5.02074 | opp_overlap 92560 TGACTTGCCAAAAAA CCCGT TTT ACGGG TTTTTTCAATTGCTT TERM 142 93009 - 92992 - g 73 -8.5 -3.66654 | opp_overlap 92991 CAGGCGAAGCTGAAA CCATTCT GAAG AGAATGG GTCTTGAAGAACGCA nusG 92670 - 93203 + | transcription antitermination protein NusG TERM 143 93439 - 93471 + G 71 -9.1 -3.29649 | opp_overlap 93413 93427 AAGCTAACCCAGCTC CACCAGTTGGACCTG CAC TAGGTCAAGCCGGTG TTAATATCATGGGAT rplK 93321 - 93800 + | 50S ribosomal protein L11 TERM 144 93815 - 93849 + F 95 -13 -3.72027 | ATTTATTGTCTTGTT GGGTTGCGAGTTTG GTTTTGA CAAGTTCGCAACCC TTATTCGTGGGAGGT TERM 145 94168 - 94158 - g 76 -6.8 -4.47007 | opp_overlap 94164, overlap 94155 94165 GAAAAAGCAAAAGAA GCAG AAG CTGC TGGAGCAGACTACGT rplA 93900 - 94598 + | 50S ribosomal protein L1 TERM 146 94637 - 94617 - f 74 -9.9 -2.65298 | opp_overlap 94617, overlap 94616 94619 TTGACTTATCACAAT CATTTTGAT AAT ATCAAAATG TTGTAAAATAGAATA TERM 147 94617 - 94637 + F 78 -9.9 -3.33162 | opp_overlap 94617 94616 94619 TTGACTTATCACAAT CATTTTGAT AAT ATCAAAATG TTGTAAAATAGAATA TERM 148 94751 - 94772 + F 83 -7.3 -4.96848 | opp_overlap 94751 ATGCTTGTATATACA GCCTCCA TGTCTTAT TGGAGGC TTTTTATATGGAGAA rplJ 94857 - 95357 + | 50S ribosomal protein L10 rplL 95399 - 95764 + | 50S ribosomal protein L7/L12 TERM 149 95782 - 95813 + F 81 -7.3 -4.75289 | overlap 95788 TTCGCCTAATCTTTT GGGAAAGCTCGCT TTTACT GGCGGGCTTTTTC TTTTCTATTCTCCTG TERM 150 95788 - 95807 + F 85 -4.9 -5.60556 | overlap 95782 TAATCTTTTGGGAAA GCTCGCT TTTACT GGCGGGC TTTTTCTTTTCTATT ybxB 95862 - 96467 + | 16S rRNA methyltransferase BPUM_0092 96703 - 96554 - | hypothetical protein TERM 151 96603 - 96624 + g 88 -3 -5.8901 | TTTGTTTTTGGATGT GGTTTTCT TATTTT AGAAACCC TTTTTTCTTTTGTCT TERM 152 97200 - 97181 - g 73 -3.6 -5.06585 | overlap 97183 TAAAGTAGACAAAAA CGGTAAAA AAGG TTTTACTG CGACTGTCATTCCAA rpoB 96714 - 100304 + | DNA-directed RNA polymerase subunit beta TERM 153 100960 - 100945 - g 80 -9 -3.99985 | GATACACTGAAAGAA GAGCTG AAAA CAGCTC AAGGACAGCGTCGTA TERM 154 103716 - 103698 - g 77 -10.2 -3.18452 | opp_overlap 103695 ACTATTCGAAGGTAA GCGCCCTG CAA CAGGCCGC CCAGTTCTTCTTGGT rpoC 100366 - 103965 + | DNA-directed RNA polymerase subunit beta' TERM 155 104053 - 104002 - f 88 -6.8 -5.25656 | gap 1, opp_overlap 104009 AAAATCATCAAAAAA TGG-TGAAGGATGTCAAGATAATCT GTC ATATGATATTGACATCCTTCTGCCA TGATGATAATATAAC ybxF 104111 - 104359 + | putative ribosomal protein L7Ae-like TERM 156 104371 - 104398 + F 83 -7.9 -4.68528 | opp_overlap 104390, overlap 104390 ATAGCGTACTTGTTT TGTTTTTGCAT GTGTAA ATGCAAAAGCA TTGTTTTTTGCCTTT rpsL 104472 - 104891 + | 30S ribosomal protein S12 rpsG 105012 - 105482 + | 30S ribosomal protein S7 TERM 157 107316 - 107306 - g 73 -5.4 -4.66609 | TATGGCATTGAAAAA TGCT GTC AGCA AATGTAACCCAGTTC fusA 105537 - 107615 + | elongation factor G tufA 107734 - 108924 + | elongation factor Tu TERM 158 108961 - 108939 - f 81 -7.1 -4.80289 | gap 1, opp_overlap 108939 108949, overlap 108934 ATAAAACATATAAAA GAGACTCCTT GCAA AAGG-GTCTC TTTTTTTGCTTTTCC TERM 159 108939 - 108961 + F 100 -7.1 -5.79588 | gap 1, opp_overlap 108939 108934, overlap 108949 ATAAAACATATAAAA GAGACTCCTT GCAA AAGG-GTCTC TTTTTTTGCTTTTCC ybaC 109035 - 109994 + | alpha/beta fold family hydrolase TERM 160 110129 - 110160 + F 72 -5 -4.82901 | opp_overlap 110129 GAGGTTGCTGACACA CCCGGCCGCTTTGC CATG GCAAGGTGATCAGG TTTTTCTCACGGAGA rpsJ 110213 - 110521 + | 30S ribosomal protein S10 rplC 110559 - 111188 + | 50S ribosomal protein L3 rplD 111216 - 111839 + | 50S ribosomal protein L4 rplW 111839 - 112126 + | 50S ribosomal protein L23 rplB 112155 - 112988 + | 50S ribosomal protein L2 TERM 161 112998 - 113020 + F 75 -9.9 -3.05384 | opp_overlap 112989 AAGTAACGGGGTTGT CTACGGTTC ATTTA GGACCGTAG TTCAATCACGAAGGG rpsS 113046 - 113324 + | 30S ribosomal protein S19 rplV 113342 - 113683 + | 50S ribosomal protein L22 TERM 162 114118 - 114096 - g 74 -6.2 -4.56117 | overlap 114101 CACAAAAACAAACAA TCCAACGCAC AAT GCGTGCTGGA GCACAAGGAATCAAA rpsC 113687 - 114343 + | 30S ribosomal protein S3 rplP 114345 - 114779 + | 50S ribosomal protein L16 rpmC 114745 - 114969 + | 50S ribosomal protein L29 rpsQ 114995 - 115258 + | 30S ribosomal protein S17 rplN 115298 - 115666 + | ribosomal protein L14 TERM 163 115774 - 115759 - g 74 -7.6 -3.93913 | opp_overlap 115758 AAAGATAAAGGTAAA CAAGGA GTCA TCCTTG CTGCTTTCCCTAAGA rplX 115702 - 116013 + | 50S ribosomal protein L24 rplE 116039 - 116578 + | 50S ribosomal protein L5 rpsN1 116601 - 116786 + | ribosomal protein S14 rpsH 116818 - 117216 + | 30S ribosomal protein S8 rplF 117233 - 117784 + | 50S ribosomal protein L6 rplR 117817 - 118179 + | 50S ribosomal protein L18 rpsE 118204 - 118704 + | 30S ribosomal protein S5 TERM 164 118856 - 118840 - g 70 -7.9 -3.73982 | opp_overlap 118840 CGTACATGAAGACAA TGCAGCG ATC CGCGGCA TGATTAACAAGGTGT rpmD 118718 - 118900 + | 50S ribosomal protein L30 rplO 118931 - 119371 + | 50S ribosomal protein L15 secY 119373 - 120665 + | preprotein translocase subunit SecY TERM 165 120696 - 120670 - f 100 -10.9 -5.68438 | gap 1, opp_overlap 120673, overlap 120673 TTATGAAATAAAAAA GAG-GGCTGGGC TCTT GCCCAACCTCTC TAAGTAAGGAAGGGG TERM 166 120673 - 120692 + F 73 -9.2 -2.91264 | opp_overlap 120670 120673 TGAAATAAAAAAGAG GGCTGGGC TCTT GCCCAACC TCTCTAAGTAAGGAA TERM 167 120692 - 120673 - f 84 -11.4 -3.25791 | opp_overlap 120673, overlap 120670 TGAAATAAAAAAGAG GGCTGGGC TCTT GCCCAACC TCTCTAAGTAAGGAA TERM 168 120888 - 120871 - g 75 -7.1 -4.4078 | GGGCTCGAAGCAAAA TCCTTTA TCGA TAAAGGA GAGCTTGTTCCTGAT TERM 169 121126 - 121116 - g 73 -5.4 -4.64144 | AAGAATTTGCAAAAA TTGC GGA GCAA CATATCATTTAGTAT adk 120721 - 121374 + | adenylate kinase TERM 170 122071 - 122051 - g 91 -8.3 -4.62069 | GGTTGATGGGAAAAA GTGTGCTCA CTT TGAGCATAC GATTGCGATTACAGA map 121371 - 122117 + | methionine aminopeptidase infA 122430 - 122648 + | translation initiation factor IF-1 rpmJ 122680 - 122793 + | 50S ribosomal protein L36 rpsM 122815 - 123180 + | 30S ribosomal protein S13 rpsK 123201 - 123596 + | 30S ribosomal protein S11 rpoA 123772 - 124716 + | DNA-directed RNA polymerase subunit alpha rplQ 124793 - 125155 + | 50S ribosomal protein L17 ybxA 125280 - 126122 + | cobalt transporter ATP-binding subunit ybaE 126098 - 126967 + | cobalt transporter ATP-binding subunit ybaF 126964 - 127761 + | cobalt ABC transporter TERM 171 128316 - 128306 - g 79 -6.8 -4.62069 | CCTTGAGTGGAAAAA CGTC TCA GACG GGCTTGAAATGCGCG TERM 172 128467 - 128427 - g 78 -7.5 -4.57353 | gap 1, overlap 128431 128465 CCTGATGAGATAAAA GCCATGCTTGCCGC-CCG AAATCG CGAAGCGGCAGGCAAGAC TGCGCCTAGTCACGG truA 127773 - 128516 + | tRNA pseudouridine synthase A rplM 128683 - 129120 + | 50S ribosomal protein L13 rpsI 129141 - 129533 + | 30S ribosomal protein S9 TERM 173 129565 - 129583 + F 79 -10.4 -3.28791 | opp_overlap 129565 TGGACGTTTTACAAA GGTTTGTT ACA AACAAACC TTATAAAAAAAGCAT TERM 174 129583 - 129565 - f 83 -10.4 -3.86897 | opp_overlap 129565 TGGACGTTTTACAAA GGTTTGTT ACA AACAAACC TTATAAAAAAAGCAT TERM 175 129583 - 129627 + F 74 -10.2 -2.74496 | opp_overlap 129595, overlap 129595 TTGTTACAAACAAAC CTTATAAAAAAAGCATCAGC TTCGT GCTGGTGCTTTTTTTTTGTG CCTTTTTATGTAGAT TERM 176 129615 - 129595 - f 90 -6.8 -5.63504 | opp_overlap 129595 129583 AACCTTATAAAAAAA GCATCAGC TTCGT GCTGGTGC TTTTTTTTTGTGCCT TERM 177 129595 - 129615 + F 100 -9 -6.24157 | opp_overlap 129595, overlap 129583 AACCTTATAAAAAAA GCATCAGC TTCGT GCTGGTGC TTTTTTTTTGTGCCT ynaD 129726 - 130241 + | ribosomal protein acetyltransferase BPUM_0139 130339 - 131085 + | metal-dependent hydrolase BPUM_0140 131105 - 131578 + | transcriptional regulator TERM 178 131590 - 131612 + F 100 -8.4 -5.85425 | opp_overlap 131589 131590 131593 ATAAAATCATCAAAC GGAGGGGATT CAC AAACCCCTTC TTTTTTGTTTCTTTA TERM 179 131713 - 131697 - g 86 -8.1 -4.66987 | TATATTTGAATAAAA CAAAAGA AGA TCTTTTG ACATTTGTCATGAAA BPUM_0141 131669 - 132685 + | D-alanyl-D-alanine carboxypeptidase TERM 180 132692 - 132721 + T 82 -9.4 -4.09117 | opp_overlap 132697, overlap 132697 ACTAAATAACCATCA AAAAACAGAGGG AGACAC CCCTCTGTTTTA TTATTTCTGCATGGG TERM 181 132716 - 132697 - T 100 -10 -5.22794 | opp_overlap 132692 132697 ATAACCATCAAAAAA CAGAGGGA GACA CCCCTCTG TTTTATTATTTCTGC TERM 182 132697 - 132716 + T 91 -9.3 -5.05116 | opp_overlap 132697, overlap 132692 ATAACCATCAAAAAA CAGAGGG AGACAC CCCTCTG TTTTATTATTTCTGC BPUM_0142 133291 - 132722 - | hypothetical protein ybaK 133438 - 133881 + | hypothetical protein cwlD 133940 - 134653 + | N-acetylmuramoyl-L-alanine amidase TERM 183 134641 - 134658 + F 71 -3.4 -5.0925 | gap 1, opp_overlap 134641, overlap 134648 GACAGAGCAAAAAGA GCCGCCT GAATA AGG-GGC TTTTTCCTTTTGAAC ybaL 134757 - 135815 + | ATPase TERM 184 135848 - 135821 - T 86 -11.3 -4.06805 | opp_overlap 135819 135817 135822, overlap 135822 AAAAGCATAATGAAA GCCCGAGTGGA TGTAAG TCCACTCGGGT GATGTTTAACTGCCG TERM 185 135822 - 135847 + T 100 -15.5 -2.86124 | opp_overlap 135822 135821, overlap 135819 135817 AAAGCATAATGAAAG CCCGAGTGGAT GTAA GTCCACTCGGG TGATGTTTAACTGCC TERM 186 135847 - 135822 - T 100 -14.8 -3.02456 | opp_overlap 135819 135817 135822, overlap 135821 AAAGCATAATGAAAG CCCGAGTGGA TGTAAG TCCACTCGGG TGATGTTTAACTGCC gerD 136429 - 135854 - | spore germination protein D kbaA 136520 - 137122 + | KinB signaling pathway activation protein KbaA ybaN 137879 - 137115 - | sporulation polysaccharide deacetylase TERM 187 138129 - 138115 - H 72 -7.8 -3.81951 | TGTTATATTATTAAA GCCGCT AAG AACGGC GAAGATGATCTTTGA TERM 188 138213 - 138194 - H 79 -5 -5.24531 | overlap 138195 AGTTTTTATAAAAAA TCCTATGA TGTT TCATAGGT AGTCAGTCAAACGCT TERM 189 138212 - 138195 - H 75 -8.5 -3.73995 | overlap 138194 GTTTTTATAAAAAAT CCTATGA TGTT TCATAGG TAGTCAGTCAAACGC TERM 190 138391 - 138378 - H 73 -8.1 -3.68988 | GTCGAGCGAACAGAA GGGAG CTTG CTCCC GGATGTTAGCGGCGG TERM 191 138467 - 138452 - H 79 -10.4 -3.33315 | opp_overlap 138442, overlap 138462 GTAAGACTGGGATAA CTCCGG GAAA CCGGAG CTAATACCGGATAGT TERM 192 138785 - 138764 - H 81 -9.5 -3.97307 | gap 1 GTTAGGGAAGAACAA GTGCGAG-AG TAA CTGCTCGCAC CTTGACGGTACCTAA TERM 193 138937 - 138919 - H 74 -10.2 -2.75963 | overlap 138918 AGTCTGATGTGAAAG CCCCCGGC TCA ACCGGGGA GGGTCATTGGAAACT TERM 194 140328 - 140309 - H 90 -12.2 -3.66803 | opp_overlap 140308 140307 CGGGAACAGCCCAAA CCAAGAGG CTTG CCTCTTGG GGTTGTAGGACACTC TERM 195 141866 - 141853 - H 71 -4.5 -4.7254 | ACTGTTTAGCAAAAA CACAG GTCT CTGCG AAGCCGTAAGGCGAA TERM 196 143242 - 143289 + H 76 -9.8 -3.09516 | ATCGGTCGTAGGTTC GAGTCCTACCTGCGGAGCCATG CTTC CATAGCTCAGTAGGTAGAGCAC TTCCATGGTAAGGAA TERM 197 143720 - 143686 - H 81 -3.5 -5.54079 | opp_overlap 143691, overlap 143691 GGAAAAATGAAAAAA GTAAAGCCCCTAGCC ATAGA GAATAGGGGCTTTTT TGATGTTTATTTTTC TERM 198 143715 - 143691 - H 80 -7.8 -4.46531 | opp_overlap 143691, overlap 143686 AATGAAAAAAGTAAA GCCCCTAGCC ATAGA GAATAGGGGC TTTTTTGATGTTTAT TERM 199 143691 - 143715 + H 81 -5.6 -5.34055 | opp_overlap 143691 143686 AATGAAAAAAGTAAA GCCCCTAGCC ATAGA GAATAGGGGC TTTTTTGATGTTTAT TERM 200 143888 - 143874 - H 71 -4.2 -4.80882 | AGGGTATACGAAAAA GTGTTG CTT CCACAC GATTTTACACTAATC BPUM_0149 144100 - 144294 + | hypothetical protein TERM 201 144750 - 144721 - g 95 -12.9 -3.17723 | GTACGTTTAATGGAA CAGGTACACCAGG TACA CCTGGCACACCTG CAGATTCAGAAGCTG hag1 144291 - 145259 + | flagellin TERM 202 145293 - 145265 - f 70 -8.9 -3.2121 | opp_overlap 145270, overlap 145270 ATTACGATAATAAAC CAAAAGCCCCTTT GAT ATAGGGGCTTTTT TGTTTGTTTTAAAAT TERM 203 145288 - 145270 - f 88 -8.8 -4.70353 | opp_overlap 145270, overlap 145265 GATAATAAACCAAAA GCCCCTTT GAT ATAGGGGC TTTTTTGTTTGTTTT TERM 204 145270 - 145288 + F 100 -8.8 -5.88476 | opp_overlap 145270 145265 GATAATAAACCAAAA GCCCCTTT GAT ATAGGGGC TTTTTTGTTTGTTTT TERM 205 146635 - 146618 - g 87 -6.3 -5.1101 | opp_overlap 146618 TCAGCAGCTAAAAAA GAATCCG AAAA CAGATTC TATCGTGATGATTGT sulP 145590 - 147032 + | SulP family sulfate permease BPUM_0152 147091 - 148056 + | bile acid:sodium (Na+) symporter TERM 206 148085 - 148060 - T 100 -14.1 -4.4261 | opp_overlap 148060 TCTTTAACATGAAAA GACCTCCATCC TATG AGATGGAGGTC TTTTTGCGAATTAAT TERM 207 148060 - 148085 + T 100 -13.4 -4.62872 | opp_overlap 148060 TCTTTAACATGAAAA GACCTCCATC CTATGA GATGGAGGTC TTTTTGCGAATTAAT ybbC 149343 - 148096 - | hypothetical protein TERM 208 148992 - 149003 + g 85 -5.8 -5.17353 | opp_overlap 148992, overlap 148961 CATAGAGAGAGTAAA CAGG AAGA CCTG TTTTTTCATCGGTAT ybbD 151274 - 149355 - | glycoside hydrolase TERM 209 149626 - 149672 + g 71 -3 -5.06451 | gap 1 ACCATTTTTTTGTTT TGTGCGGCAGCTTCTTTCATG ACAGCA CGTGGGA-AAGCAGTCGCCCA TTTTTTCGGGTCCTG TERM 210 150868 - 150882 + g 73 -5.7 -4.56629 | opp_overlap 150862 150858, overlap 150858 ATCGACATATTTCCT GGGAA ATGTG TTCCC TTTTGTAATCTTGTG ybbE 152643 - 151288 - | hypothetical protein TERM 211 151835 - 151845 + g 70 -5.4 -4.57341 | GCTGCAAAATGCTTC GGTT TAA AACC TTTTTGCAGCGGATT TERM 212 152355 - 152370 + g 73 -5.4 -4.7254 | TACCGTTGTATTTTT GCCTGT AGCC ATAGGC TTTTTGATGGACGAT ybbF 154036 - 152663 - | PTS family sucrose (suc) porter component IIBC BPUM_0157 154902 - 154033 - | transcriptional regulator ybbI 155828 - 154917 - | N-acetylmuramic acid-6-phosphate etherase TERM 213 155043 - 155053 + g 71 -6.8 -4.12599 | overlap 155048 GACTTCTAAGTCTGC CGCT TCA AGCG TTTTCAAGGCTTGTT TERM 214 155518 - 155506 - G 73 -5.5 -4.63527 | GCAGCATGTGAAAAA GCAGA GTC TCCGC CTGCCATGATGCCGA TERM 215 155920 - 155900 - H 81 -9.9 -3.73816 | AACATTATATTTAAA TACTGAAAT TAT ATTTCAGTA AAAAAGTAGTGCTAA TERM 216 155991 - 155973 - H 100 -7.4 -5.94743 | overlap 155974 TAAAAAAAATAAAAA TCCCCTTT ACA AAAGGGGG ACAACCTGTATATAA TERM 217 155990 - 155974 - H 86 -10.9 -4.11355 | overlap 155973 AAAAAAAATAAAAAT CCCCTTT ACA AAAGGGG GACAACCTGTATATA TERM 218 156498 - 156476 - H 95 -13.6 -3.06915 | opp_overlap 156476, overlap 156478 156480 AGCTAGCCCAGTTAA GACACCTTTT TCA AAAAGGTGTC TTTTTTATGTTGGTA TERM 219 156476 - 156498 + H 100 -13.6 -5.49569 | opp_overlap 156476 156478 156480 AGCTAGCCCAGTTAA GACACCTTTT TCA AAAAGGTGTC TTTTTTATGTTGGTA TERM 220 156496 - 156478 - H 78 -10.4 -3.09327 | opp_overlap 156476, overlap 156476 156480 CTAGCCCAGTTAAGA CACCTTTT TCA AAAAGGTG TCTTTTTTATGTTGG TERM 221 157476 - 157462 - g 100 -7.8 -5.57888 | opp_overlap 157462 157470 ATGAAAAAAATAAAA CAGCCG AAG CAGCTG TTGCGTTGATTGGTT rocF 156606 - 157517 + | arginase TERM 222 157517 - 157537 + F 100 -9 -5.80951 | CGAAAAGCTATTGTA GAGCGGGA CTTGT TCCCGTTC TTTTTTGTTTTGGAT sigW 157677 - 158264 + | RNA polymerase sigma factor SigW ybbM 158279 - 158905 + | hypothetical protein TERM 223 158919 - 158942 + F 93 -11 -5.05601 | overlap 158917 AATCATACGGGTCGA GAGCAGTCTC TTTA GGGGCTGCTC TTTTTCTATATCATA ybbP 159124 - 159945 + | hypothetical protein TERM 224 160373 - 160353 - g 90 -4 -5.60689 | CGATACAAGAAAAAA CAACAGCA GAATT TCCTGTTG AAACTGAATTTTATA TERM 225 161056 - 161038 - g 83 -8.9 -4.15066 | opp_overlap 161038 GATTGATAAACTAAA GGCTTCA GATGT TGAAGCC TATATCAATGTCGGG TERM 226 161038 - 161056 + G 71 -9.6 -2.93382 | opp_overlap 161038 GATTGATAAACTAAA GGCTTCAG ATG TTGAAGCC TATATCAATGTCGGG ybbR 159938 - 161347 + | hypothetical protein TERM 227 161343 - 161327 - f 100 -12.3 -5.57729 | opp_overlap 161327 161329 AAAGAAGATAAAAAA GAGGACG AAG CGTCCTC TTGAATGGTGAAAAA TERM 228 161327 - 161343 + F 87 -12.3 -3.09516 | opp_overlap 161327, overlap 161329 AAAGAAGATAAAAAA GAGGACG AAG CGTCCTC TTGAATGGTGAAAAA TERM 229 161329 - 161341 + F 70 -9.1 -3.10796 | opp_overlap 161327, overlap 161327 AGAAGATAAAAAAGA GGACG AAG CGTCC TCTTGAATGGTGAAA glmM 161373 - 162719 + | phosphoglucosamine mutase TERM 230 162753 - 162731 - f 83 -10.6 -3.86283 | opp_overlap 162731, overlap 162736 GTAATCGATATCAAA GCAAATCGCT AGT AGCGGTTTGC TTTTTTTCGAATAAA TERM 231 162731 - 162753 + F 100 -12.8 -5.44119 | opp_overlap 162731 162736 GTAATCGATATCAAA GCAAATCGCT AGT AGCGGTTTGC TTTTTTTCGAATAAA glmS 163295 - 165097 + | D-fructose-6-phosphate amidotransferase TERM 232 165123 - 165154 + F 93 -11 -4.96848 | overlap 165125 AAATCGGATTTTTGA TACCCCTTTAGATA TCAT TTTCTAAAGGGGTG TTTTTGTGTCAAAAG TERM 233 165125 - 165152 + F 90 -11.4 -4.11141 | overlap 165123 ATCGGATTTTTGATA CCCCTTTAGATA TCAT TTTCTAAAGGGG TGTTTTTGTGTCAAA BPUM_0166 165160 - 165357 + | hypothetical protein BPUM_0167 165605 - 165961 + | hypothetical protein TERM 234 166007 - 165968 - f 83 -8.7 -4.27443 | opp_overlap 165975, overlap 165965 165975 TCATCATGAAAATAA CAAGCAAGCCCAGTGAA CTAACC TTCACTGGGCTTTTTTA TATCTTATAGACCAT TERM 235 165975 - 166000 + F 100 -13.4 -5.48787 | opp_overlap 165968 165965 165975 GAAAATAACAAGCAA GCCCAGTGAA CTAACC TTCACTGGGC TTTTTTATATCTTAT TERM 236 166000 - 165975 - f 100 -13.4 -3.67945 | opp_overlap 165975, overlap 165968 165965 GAAAATAACAAGCAA GCCCAGTGAA CTAACC TTCACTGGGC TTTTTTATATCTTAT BPUM_0168 166124 - 166315 + | hypothetical protein BPUM_0169 166334 - 167251 + | ABC transporter ATP-binding protein BPUM_0170 167248 - 168012 + | hypothetical protein BPUM_0171 168129 - 168518 + | hypothetical protein TERM 237 168528 - 168554 + F 90 -2.3 -5.86976 | ATTTAATGGGTAAAA GATTGAGTGGT TGGTT AATGCTCAATC TTTTTTGTTTTGTGA BPUM_0172 168720 - 168917 + | hypothetical protein TERM 238 168933 - 168952 + F 100 -9.4 -5.83226 | opp_overlap 168931 168929 168933 TTTATCAGTAAGATA CCTAGAAT GTAT ATTCTAGG TTTTTTTATTAAATT TERM 239 168952 - 168933 - f 74 -9.4 -3.14693 | opp_overlap 168933, overlap 168931 168929 TTTATCAGTAAGATA CCTAGAAT GTAT ATTCTAGG TTTTTTTATTAAATT TERM 240 168997 - 169007 + F 78 -5.4 -5.04385 | overlap 168994 TGTTTTTACATGGGT TTGG AGA CCAA TTTTTTGAAAGTATG TERM 241 170013 - 170023 + G 71 -4 -4.82162 | GGCGCAGTCGATCAT TTGT ACA ACAA TTTTCTATTCTTATG BPUM_0173 169066 - 170193 + | hypothetical protein TERM 242 170209 - 170232 + F 100 -9.6 -5.64006 | ATTTTTTTGGGAAGG CCGCATAGCT GAAG AGCTGTGTGG TTTTTTTAGTTGAGT TERM 243 170288 - 170314 + F 81 -6.8 -4.86731 | opp_overlap 170291, overlap 170284 170281 170291 CTTTTAGTTTGTATA TAATGTATATAT AGT ATATATACAATA TTTTGTTTCAAACAC TERM 244 170311 - 170291 - f 71 -8.5 -3.48924 | opp_overlap 170284 170281 170288 170291 TTAGTTTGTATATAA TGTATATAT AGT ATATATACA ATATTTTGTTTCAAA BPUM_0174 170355 - 170726 + | GntR family transcriptional regulator TERM 245 171048 - 171062 + G 91 -7.1 -5.29782 | opp_overlap 171048 171047 CACCTGCCTATAAAC GCTGG GATGA CCAGC TTTTTTATCAATATA BPUM_0175 170732 - 171607 + | ABC transporter ATP-binding protein TERM 246 172063 - 172078 + G 91 -7.6 -4.81863 | opp_overlap 172063 172062 ATTTAGCAGAGCAAT TCAGTG GGAT CACTGA TTTTATTATGAATTT BPUM_0176 171591 - 172196 + | ABC transporter ATP-binding protein TERM 247 172216 - 172264 + F 100 -9.4 -6.02914 | opp_overlap 172223, overlap 172220 GATGATCACAATTTT TAGAGAATCATTCATTTTG-AGGT AGG ACTTTCAAAATGGATGATTCT-TA TTTTTTTTGTATCCG TERM 248 172220 - 172261 + F 100 -12.7 -5.05442 | gap 1, opp_overlap 172223, overlap 172216 ATCACAATTTTTAGA GAATCATTCATTTTG-AGGT AGG ACTTTCAAAATGGATGATTC TTATTTTTTTTGTAT BPUM_0177 172384 - 172599 + | transcriptional regulator TERM 249 172788 - 172811 + G 76 -6.8 -4.53705 | opp_overlap 172791, overlap 172791 CAAGCTTCGGTCCAT CAATTCTCTT CTCC AAGAGAATGG TTTTATATAGCGATT BPUM_0178 172596 - 172895 + | hypothetical protein TERM 250 172986 - 172961 - g 84 -2.7 -5.66868 | gap 1, overlap 172965 AACCAATGAAAAAAA TATTGAGAATCA TGC TGA-TCTCCATA GGCACCATTATCACG BPUM_0179 172951 - 173898 + | alpha/beta fold family hydrolase TERM 251 174069 - 174086 + F 100 -7.1 -5.8096 | opp_overlap 174053 174072 ATTGATGTTTCTCAA TCAGAAT GATC ATTCTGA TTTTTATTTTTTATG ybxG 174128 - 175516 + | APC family amino acid-polyamine-organocation transporter TERM 252 175553 - 175514 - T 79 -7.9 -4.25074 | opp_overlap 175522, overlap 175517 175522 GATCAAACGGTAAAA TAACCAAAGCCTTGCGG GATGGA CCGCAAGGCTTTTTTTG TTTAGATAGAAGCTT TERM 253 175550 - 175517 - T 85 -9.6 -4.2354 | opp_overlap 175522, overlap 175514 175522 CAAACGGTAAAATAA CCAAAGCCTTGCGG GATGGA CCGCAAGGCTTTTT TTGTTTAGATAGAAG TERM 254 175545 - 175522 - T 100 -13.9 -4.20834 | opp_overlap 175522, overlap 175517 175514 GGTAAAATAACCAAA GCCTTGCGG GATGGA CCGCAAGGC TTTTTTTGTTTAGAT TERM 255 175522 - 175545 + T 100 -13.9 -5.96894 | opp_overlap 175517 175514 175522 GGTAAAATAACCAAA GCCTTGCGG GATGGA CCGCAAGGC TTTTTTTGTTTAGAT BPUM_0181 176436 - 175555 - | glycerophosphodiester phosphodiesterase TERM 256 176299 - 176270 - G 73 -8.6 -3.62597 | overlap 176271 GCGAGTTTGTAAGAA GCCAGGGTATGC TCTGGT GCATACCCTGAT GCTCCGCGATGTGCA TERM 257 176298 - 176271 - G 83 -12.1 -2.77344 | overlap 176270 CGAGTTTGTAAGAAG CCAGGGTATGC TCTGGT GCATACCCTGA TGCTCCGCGATGTGC glpT 177863 - 176529 - | major facilitator superfamily glycerol-3-phosphate:cation symporter TERM 258 176711 - 176697 - G 71 -4.9 -4.6644 | opp_overlap 176708 176710 AATATAGCCGAAAAA GCCAG TGAGT CCGGC CGCAGTGCCAGCCGC TERM 259 176710 - 176726 + g 73 -3.5 -5.00616 | opp_overlap 176697, overlap 176708 AAGCCAGTGAGTCCG GCCGCAG TGC CAGCCGC TTTTTTAGGAGCGAG TERM 260 177732 - 177718 - G 74 -6.4 -4.43681 | TATGGAATAGCAAAA GCGAAA TTT TTCCGC AGCAAATAATAGCCA TERM 261 177906 - 177932 + G 100 -11 -4.56597 | opp_overlap 177906 TTGACTGAAGCAAAA GTACGAGATCAG CGT TTGATCTTGTAC TTTTTAAGAGACAAA TERM 262 177932 - 177906 - g 82 -8.1 -4.43477 | opp_overlap 177906 TTGACTGAAGCAAAA GTACGAGATCA GCGTT TGATCTTGTAC TTTTTAAGAGACAAA BPUM_0183 177891 - 178049 + | hypothetical protein TERM 263 178075 - 178060 - Tf 100 -6.1 -5.96521 | opp_overlap 178060 AGTAACGAAAAAAAA TCCGC ACAATG GCGGA TTTTTCATTAGCTGT TERM 264 178060 - 178075 + TF 79 -6.1 -4.89009 | opp_overlap 178060 AGTAACGAAAAAAAA TCCGC ACAATG GCGGA TTTTTCATTAGCTGT BPUM_0184 178860 - 178090 - | peptidylprolyl isomerase TERM 265 178204 - 178215 + gF 72 -2.2 -5.19819 | TGATTTAACCTCTTT GTAC TCTG GTGC TTTTTGCTTTTGTTT TERM 266 178648 - 178660 + gF 86 -9.1 -4.31692 | TTTGTCTTGGTTGAC GGTCG CAA CGACC TTTTGATCATCGATT BPUM_0185 178835 - 178996 + | hypothetical protein yyaL 181065 - 179002 - | thioredoxin BPUM_0187 181488 - 181697 + | hypothetical protein BPUM_0188 182334 - 181828 - | hypothetical protein TERM 267 181920 - 181902 - G 73 -5.2 -4.58283 | opp_overlap 181907 181908 CAATGTCTTTAAAAA CGATATGG TTC CCAAACCG TTTTTTGCTTAGGTC TERM 268 181907 - 181920 + g 79 -3.1 -5.28481 | opp_overlap 181902, overlap 181908 TCTTTAAAAACGATA TGGTT CCCA AACCG TTTTTTGCTTAGGTC TERM 269 182177 - 182204 + g 70 -3.6 -4.78205 | gap 1, overlap 182178 TCTGTTTCGAATACT TCTATCAA-AGGA TCT TCTTTTTGATAGG TTTTGTGCTTTTTTT yrkD 182508 - 182768 + | hypothetical protein TERM 270 182765 - 182807 + F 72 -8.7 -3.31269 | gap 1, opp_overlap 182774, overlap 182774 ATTGGTGAAAAGCCG GTAAGAAATTCC-TCAGCCT TTGG AGGTTGACGGATTTTTTTAC TTGATGTAATATACC TERM 271 182774 - 182798 + F 89 -5.8 -5.65513 | gap 1, opp_overlap 182774, overlap 182765 AAGCCGGTAAGAAAT TCC-TCAGCCT TTGG AGGTTGACGGA TTTTTTTACTTGATG yrkE 182893 - 183375 + | hypothetical protein BPUM_0191 183390 - 183743 + | rhodanese-domain-containing protein yrkF 183791 - 184351 + | response regulator BPUM_0193 184366 - 185493 + | zinc (Zn) dependent hydrolase yrkI 185527 - 185757 + | response regulator TERM 272 185767 - 185787 + F 72 -5.4 -4.67038 | opp_overlap 185783 TCCTAAAGGATGTAG GGGTATCT GCTGA AGATCCCC TTTTCCTTTTGCAAA yrkJ 185816 - 186592 + | hypothetical protein TERM 273 186599 - 186623 + T 100 -5.8 -5.69793 | opp_overlap 186597 186599 TTATTATAAAGAAGA GACCAACA AAGCAAACG TGTTGGTC TTTTTTATTTGATGT BPUM_0196 186804 - 186628 - | hypothetical protein TERM 274 186911 - 186932 + r 74 -8.8 -3.5511 | opp_overlap 186911, overlap 186909 TTTTTAACAAAAAAA GAAGCATC GTAAAG GATGCTTC TCTTTCTCAATAAGA TERM 275 186932 - 186911 - R 100 -8.8 -5.7946 | opp_overlap 186909 186911 TTTTTAACAAAAAAA GAAGCATC GTAAAG GATGCTTC TCTTTCTCAATAAGA proS2 188372 - 186939 - | prolyl-tRNA synthetase TERM 276 188403 - 188459 + H 78 -9.6 -3.68244 | gap 1, opp_overlap 188403, overlap 188447 TTAAAAAACAAAAAA GCTGTGCTTTAAGTTAGGGACCATTCC TGGT GGTACCA-CCCTAATTTAAAGCACAGC TTTACACTTGATCAT TERM 277 188459 - 188403 - H 100 -11.8 -6.04324 | gap 1, opp_overlap 188403 188447 TTAAAAAACAAAAAA GCTGTGCTTTAAGTTAGGGACCATTCC TGGT GGTACCA-CCCTAATTTAAAGCACAGC TTTACACTTGATCAT TERM 278 188840 - 188880 + H 100 -8.5 -6.04953 | opp_overlap 188840 188841, overlap 188841 CCAGGATCCGATAAA TCCTGATTACAAAAGCG TGCTTTC CTTTTTTGTAATCAGGG TTTTTTTGTTTGTCT TERM 279 188841 - 188879 + H 85 -9.8 -4.19311 | opp_overlap 188840 188841, overlap 188840 CAGGATCCGATAAAT CCTGATTACAAAAGCG TGCTTTC CTTTTTTGTAATCAGG GTTTTTTTGTTTGTC TERM 280 189376 - 189387 + G 74 -4.4 -5.06414 | CACTGGTTCTCGGTG TACC GATC GGTA TTTTTATTACAGAGA ydhL 188946 - 190118 + | major facilitator transporter TERM 281 190137 - 190118 - T 87 -12.2 -3.02144 | opp_overlap 190118 GCATCGTGCTGAATA GCTGCCTA ATGA TAGGCAGC TTTTTTATGTTCTAC TERM 282 190118 - 190137 + T 100 -12.2 -5.5208 | opp_overlap 190118 GCATCGTGCTGAATA GCTGCCTA ATGA TAGGCAGC TTTTTTATGTTCTAC BPUM_0199 191004 - 190159 - | acetyltransferase TERM 283 191040 - 191055 + H 77 -6.8 -4.52873 | TACATACATCATTTT CAGGTC TGAT GGCCTG TTCTTTTTATCACAC BPUM_0200 191142 - 191600 + | MarR family transcriptional regulator TERM 284 191643 - 191611 - f 91 -9.3 -5.14477 | opp_overlap 191611 TATAGATTGAAAAAA CCGAAACCATC GTAGAAAAGGA GATGGTTTCGG TTTTTATATGGTAAA TERM 285 191611 - 191643 + F 91 -9.3 -5.00895 | opp_overlap 191611 TATAGATTGAAAAAA CCGAAACCATC GTAGAAAAGGA GATGGTTTCGG TTTTTATATGGTAAA BPUM_0201 191651 - 191956 + | hypothetical protein TERM 286 192274 - 192292 + G 70 -7.4 -3.85817 | AAAGAGTATAGCCCT TCATGCGG GAG CCGGATGA TTTATCAGGGAGAGT BPUM_0202 191953 - 192414 + | hypothetical protein TERM 287 192914 - 192895 - g 85 -7.2 -4.78764 | gap 1, overlap 192896 192897 CAAACGGAGTAAAAA TGCCGAAGC TAG GCTTCGG-A GTATGGCAGGTAAAA TERM 288 192914 - 192896 - g 73 -8.8 -3.46174 | overlap 192895 192897 AAACGGAGTAAAAAT GCCGAAGC TAG GCTTCGGA GTATGGCAGGTAAAA TERM 289 192913 - 192897 - g 88 -12.3 -2.6662 | overlap 192895 192896 AACGGAGTAAAAATG CCGAAGC TAG GCTTCGG AGTATGGCAGGTAAA yvgN 192849 - 193676 + | aldo/keto reductase TERM 290 193713 - 193683 - T 75 -8.4 -3.75629 | opp_overlap 193688, overlap 193688 GATTTTTAATCGAAA GAAAAGCACAGG TGGCATG CCTGTGCTTTTT ATTTAACGATTTTTT TERM 291 193688 - 193708 + T 100 -9.7 -5.27938 | opp_overlap 193683 193688 TTAATCGAAAGAAAA GCACAGGTG GCA TGCCTGTGC TTTTTATTTAACGAT TERM 292 193708 - 193688 - T 90 -8.3 -4.94058 | opp_overlap 193688, overlap 193683 TTAATCGAAAGAAAA GCACAGG TGGCATG CCTGTGC TTTTTATTTAACGAT gldA 194801 - 193716 - | glycerol dehydrogenase ybfQ 194988 - 195956 + | hypothetical protein TERM 293 195951 - 195971 + F 100 -14.1 -5.36441 | opp_overlap 195951, overlap 195969 CAAGCGATCTCACAA GGATAGAGG ACT CCTCTATCC TTTTTTCTATACAGA TERM 294 195971 - 195951 - f 100 -14.1 -3.33969 | opp_overlap 195951 195969 CAAGCGATCTCACAA GGATAGAGG ACT CCTCTATCC TTTTTTCTATACAGA TERM 295 195988 - 196012 + F 100 -9.4 -5.95449 | opp_overlap 195988 195992, overlap 195969 TTTTTCTATACAGAA GAAAGAGGGA TTCAT TTCCTCTTTC TTTTTTGTTTTGTTT TERM 296 197309 - 197320 + G 71 -2.2 -5.16572 | overlap 197308 197313 ATTTATGGCGTGCCT CGTC CAGC GATG TTTTTTAACTTAGCT TERM 297 197525 - 197537 + G 83 -9.1 -4.15222 | CTCGGTTTTGTCTTT GCGTC ATT GACGC TTTATTGGGCGAGAT ybeC 196283 - 197902 + | APC family amino acid-polyamine-organocation transporter TERM 298 197908 - 197934 + T 91 -9.4 -5.13722 | opp_overlap 197908 197904 TAAAGAATAAAGGAA CGGCTGCCTG AATATCA TGGGCAGCCG TTTTATTTTGATAAA TERM 299 197934 - 197908 - T 75 -8.1 -3.78475 | gap 2, opp_overlap 197908, overlap 197904 TAAAGAATAAAGGAA CGGCTGCC--TGA ATA TCATGGGCAGCCG TTTTATTTTGATAAA BPUM_0207 198137 - 197937 - | hypothetical protein TERM 300 198144 - 198130 - G 81 -4.2 -5.31275 | overlap 198131 GCTGACCAGAAAAAA GCCTTC ACT GAAGGT CACCTCCTTGGAGTA TERM 301 198143 - 198131 - G 72 -7.7 -3.78042 | overlap 198130 CTGACCAGAAAAAAG CCTTC ACT GAAGG TCACCTCCTTGGAGT TERM 302 198619 - 198597 - g 79 -8.4 -4.14345 | opp_overlap 198596 GAAGATTAAACGAAA GTCTGCATGT ATC ACTCGCAGAC CATATTCATTACGCC BPUM_0208 198323 - 199159 + | transcriptional antiterminator TERM 303 200385 - 200368 - g 78 -10.5 -3.34401 | opp_overlap 200366 200365 200368 200378 AAAAGACCATATTAA GCCGGCG ACTG CGCCAGC TGTATTTTCACAAGC BPUM_0209 199394 - 201253 + | PTS family glucose/glucoside (glc) porter component IIBCA BPUM_0210 201272 - 202693 + | family 1 glycosyl hydrolase TERM 304 202730 - 202705 - f 100 -11.9 -4.88711 | opp_overlap 202705 ATAACATATGAAAAA GCCAATCACCT TATG AGGTGGTTGGC TTTTTTGATTTCACT TERM 305 202705 - 202730 + F 100 -14.1 -5.38497 | opp_overlap 202705 ATAACATATGAAAAA GCCAATCACCT TATG AGGTGGTTGGC TTTTTTGATTTCACT TERM 306 203060 - 203040 - f 100 -11.9 -6.28401 | TAAAAAATAAAAAAA TGATTGCGG ACA CCGCAACCA AAAAAGTAATTTTCT TERM 307 203752 - 203735 - g 90 -2 -6.01187 | AAGGAAAGAAAAAAA CAACAA GAGTAT TTGCTG TAGACAATGGAAAAA BPUM_0211 203164 - 203901 + | hypothetical protein TERM 308 203906 - 203922 + T 100 -10.9 -5.82172 | opp_overlap 203906 TATTACACTAAAAAA CCCCTAA TTT TTAGGGG TTTTTTTCTCTTCAT TERM 309 203922 - 203906 - T 100 -10.9 -5.23316 | opp_overlap 203906 TATTACACTAAAAAA CCCCTAA TTT TTAGGGG TTTTTTTCTCTTCAT BPUM_0212 204226 - 203909 - | hypothetical protein BPUM_0213 204527 - 204943 + | rifampin ADP-ribosyl transferase TERM 310 204963 - 204989 + T 93 -10.1 -4.99568 | gap 1, opp_overlap 204963 TCTCAATCACACGAA GGCCGCCTCATC AACA GCTG-GGCGGCC TTTTGTTTGATCTTA TERM 311 204989 - 204963 - T 78 -10.1 -3.32647 | gap 1, opp_overlap 204963 TCTCAATCACACGAA GGCCGCCTCATC AACA GCTG-GGCGGCC TTTTGTTTGATCTTA BPUM_0214 206921 - 205002 - | transcription antiterminator TERM 312 206203 - 206220 + g 89 -6.9 -5.32699 | overlap 206206 TGTGTACGAGTGGTA CTGGCGG GTAT CCGCTGG TTTTTTCGTGTTTGC ydhR 207802 - 206918 - | fructokinase TERM 313 207469 - 207432 - G 90 -10.7 -3.91196 | gap 1, overlap 207435 207461 207462 GTGATATAGACCAAA GAAGCAGGCTTTTCTGCT TCA AGC-GAAAAGCGGGCTTC CCCGAGTGCTGCACA TERM 314 207466 - 207435 - G 71 -6.6 -4.07595 | gap 1, overlap 207432 207461 207462 ATATAGACCAAAGAA GCAGGCTTTTCTGCT TCA AGC-GAAAAGCGGGC TTCCCCGAGTGCTGC TERM 315 207818 - 207862 + r 79 -2.3 -5.64421 | gap 3, opp_overlap 207810 207823 207825, overlap 207820 207822 207823 GATCAATGCCCTCCA TTAA-A-G-AGGGGCGGAATCC AAAT GGATCCCGCCCCTACATGTTCA TTTTTTCTTTACAAT TERM 316 207820 - 207858 + r 79 -8.1 -4.07772 | gap 1, opp_overlap 207810 207823 207825, overlap 207818 207822 207823 TCAATGCCCTCCATT AAAG-AGGGGCGGAATCC AAAT GGATCCCGCCCCTACATG TTCATTTTTTCTTTA TERM 317 207822 - 207856 + r 81 -10.7 -3.5834 | gap 1, opp_overlap 207810 207823 207825, overlap 207820 207818 207823 AATGCCCTCCATTAA AG-AGGGGCGGAATCC AAAT GGATCCCGCCCCTACA TGTTCATTTTTTCTT TERM 318 207854 - 207823 - R 100 -16.6 -3.72695 | opp_overlap 207823 207822 207820 207818, overlap 207810 207825 ATGCCCTCCATTAAA GAGGGGCGGAATCC AAAT GGATCCCGCCCCTA CATGTTCATTTTTTC TERM 319 207823 - 207855 + r 95 -14.2 -2.72564 | gap 1, opp_overlap 207810 207823 207825, overlap 207822 207820 207818 ATGCCCTCCATTAAA G-AGGGGCGGAATCC AAAT GGATCCCGCCCCTAC ATGTTCATTTTTTCT TERM 320 207852 - 207825 - R 100 -19.2 -3.44848 | opp_overlap 207823 207822 207820 207818, overlap 207810 207823 GCCCTCCATTAAAGA GGGGCGGAATCC AAAT GGATCCCGCCCC TACATGTTCATTTTT BPUM_0216 210523 - 207860 - | alpha-mannosidase TERM 321 208186 - 208171 - G 74 -4.8 -4.78848 | CTCGGAAAGAGAAAA TTAAAC GCCC GTTTAA AAAATCTGCCCGTTC BPUM_0217 211670 - 210552 - | PTS family fructose/mannitol (fru) porter component IIC BPUM_0218 212036 - 211710 - | PTS family fructose/mannitol (fru) porter component IIB BPUM_0219 212491 - 212033 - | PTS family fructose/mannitol (fru) porter component IIA TERM 322 212585 - 212611 + H 74 -8.8 -3.53546 | opp_overlap 212584 212585 TTTTCCGTTTGAAAT GGCAAAAAGTTT ATG AAGCTATTTGCC TTGTAGTCTGTTATC wprA 212733 - 215402 + | serine protease TERM 323 215411 - 215433 + F 100 -10.7 -6.08342 | opp_overlap 215399 215411 215410 215408 AAAGTAAGAGAAGAG CTTCCCTTT CAAAA AAAGGGAAG TTTTTTTGTTTGTTA TERM 324 215433 - 215411 - f 81 -11.4 -2.67425 | opp_overlap 215411, overlap 215399 215410 215408 AAAGTAAGAGAAGAG CTTCCCTTTC AAA AAAAGGGAAG TTTTTTTGTTTGTTA ylqB 215509 - 215991 + | hypothetical protein TERM 325 216040 - 216070 + T 93 -10.6 -5.06414 | opp_overlap 216045, overlap 216025 216045 TCGTTTTTTCATAGA AAAAAGGATGTCAT CAA GTGACATCCTTTTC TTTTTGTTAGCAAAC TERM 326 216065 - 216045 - T 100 -9.8 -5.36441 | opp_overlap 216025 216040 216045 TTTTCATAGAAAAAA GGATGTCA TCAAG TGACATCC TTTTCTTTTTGTTAG TERM 327 216045 - 216065 + T 100 -10.5 -5.42605 | opp_overlap 216045, overlap 216025 216040 TTTTCATAGAAAAAA GGATGTCAT CAA GTGACATCC TTTTCTTTTTGTTAG BPUM_0222 216955 - 216335 - | hypothetical protein TERM 328 216709 - 216747 + g 72 -9.7 -2.85574 | gap 1, opp_overlap 216715, overlap 216708 216711 TGCTGACACCCGCTA CATCAATCGTTGTGGTCG CATT CGAC-ACAACGATGGCTG ATTTGATGGCATTCC TERM 329 216741 - 216715 - G 78 -10.3 -3.2614 | gap 1, opp_overlap 216711 216709 216708 CACCCGCTACATCAA TCGTTGTGGTCG CATT CGAC-ACAACGA TGGCTGATTTGATGG TERM 330 217070 - 217088 + r 76 -8.8 -3.75617 | opp_overlap 217070 ATTTCATAGAAAAAA CCTGGCGT TAT ACACCAGG TTCTTCACGTTTTTT TERM 331 217088 - 217070 - R 100 -11 -5.37043 | opp_overlap 217070 ATTTCATAGAAAAAA CCTGGCGT TAT ACACCAGG TTCTTCACGTTTTTT ybgF 218480 - 217077 - | APC family amino acid-polyamine-organocation transporter TERM 332 217318 - 217306 - G 70 -2.7 -5.00616 | overlap 217307 CCTTCCTGTAAAAAA CGTTT CCG AAACA TAAATTGTGAGGCAG TERM 333 218425 - 218437 + g 78 -5.5 -4.92777 | GAAAGCATGAACAGG TGGCG GCT CGTCA TTTTTCGTTGATATT mmuM 219465 - 218527 - | homocysteine methyltransferase TERM 334 219699 - 219719 + H 100 -9.1 -5.62288 | TTTCAGAAAGCTTCA TCAAAAGGC GCT GTCTTTTGA TTTTTATTTTGTTCA TERM 335 219742 - 219764 + H 82 -4.9 -5.42131 | overlap 219743 TTTGTTCAACGACTG TCTTCTTTC GTGCA GAAAGAGGG TTTTTTATATGCTTA TERM 336 220455 - 220433 - H 73 -8.4 -3.68738 | opp_overlap 220429, overlap 220429 TGCCGAAGAAATCAA TCACACCTTG GAT CGAGGCGTGA CGATTTTAAACGGAC TERM 337 220640 - 220655 + H 100 -5.4 -6.15717 | opp_overlap 220640 TATATAAAAGCGAAA GGACCT CAAA AGGTTC TTTTTTTTATATTTA BPUM_0226 220729 - 221046 + | transcriptional regulator TERM 338 221408 - 221418 + G 71 -4.6 -4.58663 | ATGACGCTAGTTGGT CTGC TCG GCGG TTTTTGGAGCATCAT BPUM_0227 221039 - 221626 + | hypothetical protein BPUM_0228 221623 - 221793 + | hypothetical protein TERM 339 221817 - 221800 - T 100 -12.7 -4.15669 | opp_overlap 221802 AAGCCATAAATGAAA GACCCGC TTAT GCGGGTC TTAGCGTGTCAACAA TERM 340 221802 - 221815 + T 74 -9.5 -3.07962 | opp_overlap 221800 GCCATAAATGAAAGA CCCGC TTAT GCGGG TCTTAGCGTGTCAAC TERM 341 221988 - 221944 - T 100 -14.5 -4.63527 | opp_overlap 221953, overlap 221947 CTATCACGCTAAAAA GAAGACAAAGGGCTAAAATCA AGT TCATTTTAGCCCTTTGTCAAC AATCTGAGACCCGCT TERM 342 221985 - 221947 - T 100 -19.2 -4.42748 | opp_overlap 221953, overlap 221944 TCACGCTAAAAAGAA GACAAAGGGCTAAAATCA AGT TCATTTTAGCCCTTTGTC AACAATCTGAGACCC TERM 343 221953 - 221979 + T 86 -11 -3.87373 | opp_overlap 221947 221944 TAAAAAGAAGACAAA GGGCTAAAATCA AGT TCATTTTAGCCC TTTGTCAACAATCTG TERM 344 221996 - 222013 + T 100 -12.7 -5.47218 | opp_overlap 221992 TTGTCAACAATCTGA GACCCGC TTAT GCGGGTC TTTTTTTCGCTCGAA tcaB 223220 - 222003 - | major facilitator superfamily multidrug:cation symporter BPUM_0230 223433 - 223981 + | acetyltransferase TERM 345 224023 - 223982 - T 100 -14 -3.38768 | gap 1, opp_overlap 223987, overlap 223987 TCACATCACTCATAA TAAAAGGAAGAGCATGTCC TCAAT GGACA-GCTCTTCCTTTTT CAATTTACGCCCACA TERM 346 224018 - 223987 - T 100 -13.9 -4.79352 | gap 1, opp_overlap 223987, overlap 223982 TCACTCATAATAAAA GGAAGAGCATGTCC TCAAT GGACA-GCTCTTCC TTTTTCAATTTACGC TERM 347 223987 - 224018 + T 100 -13.9 -4.81249 | gap 1, opp_overlap 223987 223982 TCACTCATAATAAAA GGAAGAGCATGTCC TCAAT GGACA-GCTCTTCC TTTTTCAATTTACGC BPUM_0231 224231 - 224028 - | hypothetical protein TERM 348 224553 - 224577 + G 71 -8.7 -3.3353 | overlap 224550 TATACGACCGCCTAC TATTGGAAGGA TCG TCCTTACAATA TGTATTTCTGGAGAG BPUM_0232 224346 - 224885 + | hypothetical protein TERM 349 224891 - 224914 + T 100 -7.5 -5.80817 | opp_overlap 224891 GTTGAAATAAAAAAA CGATTCCTT TAAAGC GAGGAATCG TTTTTTTCTGTTACA TERM 350 224914 - 224891 - T 100 -6.8 -5.95539 | opp_overlap 224891 GTTGAAATAAAAAAA CGATTCCT TTAAAGCG AGGAATCG TTTTTTTCTGTTACA epr 226556 - 224925 - | serine protease TERM 351 225107 - 225127 + g 91 -5.3 -5.67283 | GTTTTTTAACTTTGT CGAGCCGGT TTT GCAGGCTTG TTTTTTCTTTGCCTT TERM 352 225465 - 225498 + g 100 -10.4 -4.87892 | opp_overlap 225460 TGCGCCAAGATCCAC TGTATAGCTGCGCA ATAAAG TGCGAAGCTGTACA TTTGTTTTCTTCGGA BPUM_0234 226718 - 228205 + | amidase yxaF 228243 - 228806 + | transcriptional regulator yxaG 228887 - 229909 + | dioxygenase TERM 353 229964 - 229942 - f 70 -9.1 -3.12702 | opp_overlap 229942, overlap 229941 CATGATTGAATAAAC GCCTGTCGA ACCGA TCGACGGGC TTTTTTGTTTTTCAA TERM 354 229942 - 229964 + F 100 -11.3 -5.93252 | opp_overlap 229942 229941 CATGATTGAATAAAC GCCTGTCGA ACCGA TCGACGGGC TTTTTTGTTTTTCAA TERM 355 230870 - 230855 - g 95 -7.6 -5.0133 | CACCGCTTGAAAAAA TTGAGC AGAA GCTCAA ACTGCAAGGTGGAAC adhB 230059 - 231192 + | S-(hydroxymethyl)glutathione dehydrogenase TERM 356 231224 - 231197 - T 100 -8.5 -5.33866 | opp_overlap 231200, overlap 231200 TAAAGCCATAAAAAA GAAGGCTTAGG TTTCTC CCTAAGCCTTT AATGTATGCTCGTCC TERM 357 231221 - 231200 - T 91 -10.2 -4.73105 | opp_overlap 231200, overlap 231197 AGCCATAAAAAAGAA GGCTTAGG TTTCTC CCTAAGCC TTTAATGTATGCTCG TERM 358 231200 - 231221 + T 83 -10.2 -3.89956 | opp_overlap 231200 231197 AGCCATAAAAAAGAA GGCTTAGG TTTCTC CCTAAGCC TTTAATGTATGCTCG BPUM_0238 231652 - 231215 - | transcriptional regulator TERM 359 231242 - 231267 + g 95 -4.9 -5.86465 | TGTATGCTCGTCCAT CATTTTTTCAA TTAA TTCAAAAAATG TTTTTTTATCTTCTT TERM 360 231303 - 231333 + g 71 -4.8 -4.69559 | AGGTGGTTGAACAGC TGATTGACAAGC AATTGGC GGTTGTCGATCA TTTGTTTTGCAATTT ydaB 231914 - 233422 + | long-chain-fatty-acid--CoA ligase TERM 361 234233 - 234223 - g 79 -6.8 -4.66953 | GGAAGAGGTGAAAAA TCCG CAG CGGA ACCTGCCAATTGGCA TERM 362 234548 - 234522 - g 71 -2.2 -5.10033 | opp_overlap 234521, overlap 234517 234523 234526 CGAAGACAAACAAAA GCGATACGCCTG TTG CAAGCATATGGA TGATTGGCGGCATGA TERM 363 234774 - 234785 + G 70 -3.6 -4.79053 | TGCTCAATTTACCAG GCCG CACG TGGC TTTATTTTGGTGTTT BPUM_0240 233489 - 234871 + | APC family amino acid-polyamine-organocation transporter TERM 364 234878 - 234904 + F 76 -5.2 -5.16237 | TCTTCATGAGAAAAA GGTGCAAATC CGTTGAC GATTTGTGCC TTTTTTCATACGATT BPUM_0241 234972 - 235337 + | hypothetical protein TERM 365 235367 - 235339 - f 83 -7.6 -4.54205 | gap 1, overlap 235345 ATTATATGAAATAAA CTAAGACCTTCAC CTTC GTGAAGGT-TCAG CGTGTAGACAAACCC TERM 366 235362 - 235345 - f 79 -9.9 -3.45242 | overlap 235339 TGAAATAAACTAAGA CCTTCAC CTTC GTGAAGG TTCAGCGTGTAGACA TERM 367 235528 - 235494 - f 93 -11 -5.08255 | opp_overlap 235498 235499, overlap 235499 ACGCTGAAAAGAAAA CAAAAGGCTAAAAT CGAGATC ATTTTAGCCCTTTG TCACCAATCTGGACC TERM 368 235523 - 235499 - f 91 -7.3 -5.40279 | opp_overlap 235498 235499, overlap 235494 GAAAAGAAAACAAAA GGCTAAAAT CGAGATC ATTTTAGCC CTTTGTCACCAATCT TERM 369 235542 - 235559 + F 93 -9.9 -5.03715 | TGTCACCAATCTGGA CCTTCAC CTTC GTGAAGG TTTTTTAGGAGTGCT yfhM 235646 - 236506 + | alpha/beta fold family hydrolase TERM 370 236510 - 236541 + T 95 -14.6 -2.91322 | opp_overlap 236515, overlap 236515 TTTTTGAACTAAAGA AAAAAGCTCTGGTC AGAG GACCAGAGCTTTTG TGATTTACCCAATAT TERM 371 236515 - 236536 + T 100 -14.5 -4.61566 | opp_overlap 236515, overlap 236510 GAACTAAAGAAAAAA GCTCTGGTC AGAG GACCAGAGC TTTTGTGATTTACCC TERM 372 236536 - 236515 - T 100 -14.5 -5.72053 | opp_overlap 236515 236510 GAACTAAAGAAAAAA GCTCTGGTC AGAG GACCAGAGC TTTTGTGATTTACCC glnT 237961 - 236546 - | AGCS family alanine or glycine:sodium (Na+) or proton (H+) symporter glsA1 238972 - 237992 - | glutaminase TERM 373 239285 - 239274 - H 81 -4.4 -5.38958 | opp_overlap 239274, overlap 239275 239278 ACTTACAAATAAAAA TCGA TTTG TCGA TGATTGTCTAAACAA TERM 374 239810 - 239824 + G 73 -7.1 -4.07885 | ATTCCTGTTCTTTGC CGTCC GTACG GGACG TTTTAAACAGCGCTC ycbA 239490 - 240776 + | sensor histidine kinase ycbB 240781 - 241722 + | response regulator yccF 241914 - 242999 + | hypothetical protein TERM 375 243002 - 243045 + T 76 -10.6 -2.54459 | opp_overlap 243002 243005 243010, overlap 243001 243010 GGCGACGGTATAGCA TAAGAAAAGACGC-GGCACC TTCATT GG-GCCAGCGTCTTTTTTTA GTTCATGATCATCTT TERM 376 243037 - 243010 - T 74 -5.6 -4.82819 | opp_overlap 243002 243001 243010, overlap 243005 243002 TATAGCATAAGAAAA GACGC-GGCACC TTCATT GG-GCCAGCGTC TTTTTTTAGTTCATG TERM 377 243010 - 243037 + T 86 -5.6 -5.65513 | opp_overlap 243010 243005 243002, overlap 243002 243001 TATAGCATAAGAAAA GACGC-GGCACC TTCATT GG-GCCAGCGTC TTTTTTTAGTTCATG BPUM_0248 244094 - 243054 - | lipoprotein TERM 378 243595 - 243609 + g 79 -3.4 -5.24989 | GCAGATAGCGCTTTT GCAGGG TTA TCCAGC TTTTTTGCTGTATCC TERM 379 245267 - 245255 - g 82 -6.9 -4.78149 | overlap 245256 TGCACAATCTAAAAA CGCCG AAA CGGCA CACGTCGCACTCGCT TERM 380 245266 - 245256 - g 71 -8.2 -3.46167 | overlap 245255 GCACAATCTAAAAAC GCCG AAA CGGC ACACGTCGCACTCGC yccK 244527 - 245420 + | dehydrogenase TERM 381 245443 - 245428 - T 100 -6.1 -5.75342 | opp_overlap 245428 TCTCTTGAAAAAAAA GGTGC TTAGCT GCACC TTTTTTTATGACATC TERM 382 245428 - 245443 + T 89 -6.1 -5.626 | opp_overlap 245428 TCTCTTGAAAAAAAA GGTGC TTAGCT GCACC TTTTTTTATGACATC yccG 246414 - 245449 - | sensor histidine kinase yccH 247127 - 246426 - | response regulator TERM 383 246466 - 246476 + g 79 -3.2 -5.28176 | TCTAATTGCTGCTTT GTCA TCA TGGC TTTTTTATCAGTACC TERM 384 246955 - 246943 - G 73 -9.1 -3.41878 | opp_overlap 246940 TCCGCTAATTCATAA CCGGA CAT TCCGG GCATTTCAATGTCTG TERM 385 247737 - 247724 - g 75 -2.3 -5.38326 | overlap 247725 GGAATGAAACAAAAA GTGGC GATT GCCAG AACCTTAATTCATGA natA 247289 - 248029 + | sodium (Na+) ABC transporter ATP binding protein natB 248029 - 249204 + | sodium (Na+) ABC transporter ATP binding protein TERM 386 249237 - 249217 - f 85 -6.9 -5.13137 | opp_overlap 249217 TAAAGAAAGTAAAAA CTTGTAGAT TTT ATCTGCAAG TTTTTTTATACCCAG TERM 387 249217 - 249237 + F 100 -9.1 -5.60993 | opp_overlap 249217 TAAAGAAAGTAAAAA CTTGTAGAT TTT ATCTGCAAG TTTTTTTATACCCAG BPUM_0254 249343 - 249681 + | hypothetical protein TERM 388 249729 - 249694 - T 95 -14.2 -2.92171 | opp_overlap 249694 249698 249704 249723, overlap 249697 249704 TAGACCCGTAAACGA TAAGAAAAAACCCCCG CCAT CGGGGGTTTTTCATTA GTTCTTGATGAACTT TERM 389 249694 - 249729 + T 86 -12 -2.83639 | opp_overlap 249694 249697 249704, overlap 249698 249704 249723 TAGACCCGTAAACGA TAAGAAAAAACCCCCG CCAT CGGGGGTTTTTCATTA GTTCTTGATGAACTT TERM 390 249725 - 249697 - T 95 -12.6 -3.60419 | gap 1, opp_overlap 249694 249698 249704 249723, overlap 249694 249704 ACCCGTAAACGATAA GAAAAAACCCCCG CCAT CGGGGGTTTTT-C ATTAGTTCTTGATGA TERM 391 249698 - 249725 + T 90 -12.8 -2.73203 | opp_overlap 249697 249694 249704, overlap 249694 249704 249723 CCCGTAAACGATAAG AAAAAACCCCCG CCAT CGGGGGTTTTTC ATTAGTTCTTGATGA TERM 392 249719 - 249704 - T 100 -11.8 -5.59534 | opp_overlap 249698 249694 249704, overlap 249697 249694 AACGATAAGAAAAAA CCCCCG CCAT CGGGGG TTTTTCATTAGTTCT TERM 393 249704 - 249719 + T 100 -11.8 -4.9445 | opp_overlap 249704 249697 249694, overlap 249698 249694 AACGATAAGAAAAAA CCCCCG CCAT CGGGGG TTTTTCATTAGTTCT ycdA 250785 - 249727 - | spore lipoprotein YcdA TERM 394 250268 - 250290 + g 86 -5.6 -5.28481 | GAAGAAAGGGCTTTT GCAGATGC TTGAAGT GTATCTGC TTTTTTCATTAAGTC TERM 395 250889 - 250869 - H 89 -4.1 -5.69262 | overlap 250863 GCACAAAAAGAAAAA TACAGTA TGTTTTT TACTGTA GAATGAAGCGAAAGT cwlJ 251324 - 251752 + | spore germination cell wall hydrolase TERM 396 251759 - 251806 + F 100 -10.8 -5.42259 | gap 1, opp_overlap 251767, overlap 251765 ACTTTTTAGCTTGAT GAACAGCACAATCCTC-GTAGTC AAC GATTGCCGAGGGTTGTGTTTTTC TTTTTTTCAAAATGG TERM 397 251765 - 251800 + F 100 -10.6 -5.86609 | gap 1, opp_overlap 251767, overlap 251759 TAGCTTGATGAACAG CACAATCCTC-GTAGTC AAC GATTGCCGAGGGTTGTG TTTTTCTTTTTTTCA ycdF 251872 - 252651 + | short chain dehydrogenase/reductase TERM 398 252685 - 252661 - T 91 -8.6 -5.17576 | opp_overlap 252661 GATTAATCCAAAAAA CATCCGCC CAATCAGCC GGCGGATG TTTTTTGTTCGTAGC TERM 399 252661 - 252685 + T 100 -8.6 -5.5112 | opp_overlap 252661 GATTAATCCAAAAAA CATCCGCC CAATCAGCC GGCGGATG TTTTTTGTTCGTAGC BPUM_0258 253712 - 252672 - | acyltransferase TERM 400 253352 - 253341 - G 73 -5.8 -4.57073 | opp_overlap 253340 253341 GAGCGTTGTTAAAAA CCAG ATGG CTGG GTTATGTGTGAGTCT TERM 401 253923 - 253903 - R 100 -9.8 -5.1925 | TGACAATGTAAAAAA GAAGCCAA GGGGA TTGGCTTC AAAATAGTTCTGCGA BPUM_0259 254914 - 253922 - | monooxygenase yceC 255327 - 255929 + | tellurium resistance protein yceD 255950 - 256531 + | TerD family tellurium resistance protein TERM 402 256660 - 256619 - g 77 -3.6 -5.10461 | TCGATTTAACAAAAA CCAACCCAGGACTGACGA AAGTGA TGATCGGTCTTGGGTGGG ATACGAATAAATATT yceE 256573 - 257151 + | TerD family tellurium resistance protein TERM 403 257242 - 257263 + F 74 -10.1 -2.85061 | opp_overlap 257243, overlap 257239 CAGCGATCAAGAATA ACAGCAGGC GAAA GCCTGCTGA TGCTTCTACACTTAT TERM 404 257262 - 257243 - f 100 -13.6 -3.99775 | opp_overlap 257242 257239 AGCGATCAAGAATAA CAGCAGGC GAAA GCCTGCTG ATGCTTCTACACTTA BPUM_0263 257293 - 258072 + | TerC family membrane protein TERM 405 258086 - 258112 + F 76 -5.1 -5.1101 | opp_overlap 258073 258086, overlap 258089 AGGGTGATCAAAAAG GAATGGAGTTG ACTAG CGGCTCCATCC TTTTTTGAATCATCA BPUM_0264 258167 - 259357 + | ATP/GTP-binding protein TERM 406 260084 - 260098 + G 70 -7.1 -3.77588 | opp_overlap 260083 260084 CTTTCGGGGCAAAAC GCTGG ATGAA CCAGC TTATTCGTATGAGAT BPUM_0265 259347 - 260678 + | hypothetical protein BPUM_0266 260671 - 261780 + | hypothetical protein BPUM_0267 261777 - 262592 + | hypothetical protein TERM 407 262593 - 262577 - f 75 -4.3 -5.06451 | GACGACCGCAAAAAA GCCCTCG ATT CGATAGC AGAAGTAGAAGGGTG BPUM_0268 262663 - 264279 + | tellurium resistance protein TERM 408 264891 - 264867 - g 71 -2.2 -5.1356 | overlap 264868 264869 TCTTATGAAGAAAAA GCGGCTAG-TGG AAA CCAACTAGC-AC AAATGGAGCTTGATA yceH 264294 - 265388 + | toxic anion resistance protein TERM 409 265397 - 265422 + F 100 -10.5 -5.36314 | opp_overlap 265396 265397 ATCCTAAAAAATAAG CTGTCTGTAAC TAAG GTTGCAGGCAG TTTTTTAATATTTTA TERM 410 265876 - 265864 - g 78 -4.1 -5.16472 | overlap 265854 265867 AAAAATGCTAAAAAA GCATC TCA AATGC TTGAAAAAGGGAAAA TERM 411 266231 - 266221 - g 71 -6.8 -4.14627 | opp_overlap 266226, overlap 266223 GGTGTAGACAAAGAA GAGC GCC GCTC AAAAGCGCTTGAATC opuAA 265789 - 267054 + | glycine betaine ABC transporter ATP-binding protein TERM 412 267699 - 267687 - g 71 -3.3 -5.07486 | opp_overlap 267687 CACTTGCAACAAAAA CCATC CTA GCTGG TATTAACCAAAGTAT opuAB 267065 - 267910 + | glycine betaine ABC transporter membrane protein opuAC 267910 - 268791 + | glycine betaine ABC transporter binding protein TERM 413 268862 - 268839 - g 70 -3.8 -4.82667 | gap 1, opp_overlap 268839 GGAGCATATGAAAAA GCAGTCTGCTC AAA AAGCGG-CTGC TTTTTTCTTATATAT TERM 414 268839 - 268862 + G 91 -5.3 -5.62045 | gap 1, opp_overlap 268839 GGAGCATATGAAAAA GCAGTCTGCT CAAAA AGCGG-CTGC TTTTTTCTTATATAT BPUM_0273 268831 - 269655 + | peptidase BPUM_0274 269780 - 270502 + | short chain dehydrogenase/reductase TERM 415 270514 - 270536 + T 70 -7.7 -3.59262 | opp_overlap 270506 270509 270514 ATAATATCAAGTAGA CTACCCGCT AAAAA AACGGGTAG TTTCAGCATATAGAC TERM 416 270536 - 270514 - T 75 -9.9 -2.97381 | opp_overlap 270514, overlap 270506 270509 ATAATATCAAGTAGA CTACCCGCT AAAAA AACGGGTAG TTTCAGCATATAGAC TERM 417 270709 - 270664 - T 73 -7 -4.12188 | opp_overlap 270673, overlap 270667 270669 270673 CTATCACGCTGAAAA GGAGACAAAGGGCTAAAA ATCAAGATCG TTTTAGCCCTTTGCCAAC AATCTGAGACCATCC TERM 418 270706 - 270667 - T 83 -11.7 -3.09004 | opp_overlap 270673, overlap 270664 270669 270673 TCACGCTGAAAAGGA GACAAAGGGCTAAAA ATCAAGATCG TTTTAGCCCTTTGCC AACAATCTGAGACCA TERM 419 270704 - 270669 - T 78 -10.7 -3.10091 | opp_overlap 270673, overlap 270667 270664 270673 ACGCTGAAAAGGAGA CAAAGGGCTAAAA ATCAAGATCG TTTTAGCCCTTTG CCAACAATCTGAGAC TERM 420 270719 - 270738 + T 93 -4.2 -5.86976 | GCCAACAATCTGAGA CCATCCCT AAAA ACGGGTGG TTTTTTATTTTATGA amhX 271875 - 270748 - | amidohydrolase ycgA 272029 - 273459 + | major facilitator transporter TERM 421 273470 - 273492 + F 81 -3.4 -5.55769 | ATTAATATATATAAA GCTGCTGA CTATGGT TTGGCAGC TTTTTTCTTGTGGAA TERM 422 273638 - 273594 - f 73 -7.3 -4.08064 | overlap 273595 AACCCCCTTGCAAAA GTTTGTGAAGTATTGCACAAT AAG AATGTGAAATACTTCACATAA AAAACAACCTAGTTT TERM 423 273637 - 273595 - f 79 -10.8 -3.04517 | overlap 273594 ACCCCCTTGCAAAAG TTTGTGAAGTATTGCACAAT AAG AATGTGAAATACTTCACATA AAAAACAACCTAGTT ldh 273674 - 274621 + | L-lactate dehydrogenase TERM 424 274709 - 274727 + G 91 -7.4 -5.3104 | GAGTTCGTGAGTGCA TTGGTAGC CAT GCTTCCAA TTTTGTTTTTCCTAC TERM 425 275833 - 275819 - g 70 -5.6 -4.38171 | CATATTACATTAAAA GAAGGC GCT GCCTGC TTAAAAGCATCAGTG lctP 274661 - 276283 + | LctP family L-lactate permease TERM 426 276320 - 276301 - T 88 -6.4 -5.24989 | opp_overlap 276301 TGATAGACTAAAAAA GACTGGGA CAGC TCTCAGTC TTTTTAGCGTGTAGA TERM 427 276301 - 276320 + T 86 -8.6 -4.64766 | opp_overlap 276301 TGATAGACTAAAAAA GACTGGGA CAGC TCTCAGTC TTTTTAGCGTGTAGA TERM 428 276490 - 276452 - T 100 -19.2 -4.18506 | opp_overlap 276458, overlap 276458 TCACGCTGAAAAGAA GACAAAGAGCTAAAATGA ACT CCATTTTAGCCCTTTGTC AACAATCTGAAAAGA TERM 429 276484 - 276458 - T 90 -11 -4.45253 | opp_overlap 276458, overlap 276452 TGAAAAGAAGACAAA GAGCTAAAATGA ACT CCATTTTAGCCC TTTGTCAACAATCTG TERM 430 276458 - 276484 + T 77 -8.1 -3.87373 | opp_overlap 276458 276452 TGAAAAGAAGACAAA GAGCTAAAATG AACTC CATTTTAGCCC TTTGTCAACAATCTG TERM 431 276504 - 276522 + T 100 -8.9 -5.42975 | opp_overlap 276504 TCAACAATCTGAAAA GACTGAG ATTTC CTCAGTC TTTTTCTTTATGTCG TERM 432 276522 - 276504 - T 85 -9.6 -4.24123 | opp_overlap 276504 TCAACAATCTGAAAA GACTGAGA TTT CCTCAGTC TTTTTCTTTATGTCG yhjM 277519 - 276530 - | LacI family transcriptional regulator yhjL 277629 - 278954 + | pyridoxal-phosphate-dependent aminotransferase yhjK 278929 - 279795 + | HAD family hydrolase yhjJ 279792 - 280838 + | GFO/IDH/MocA family dehydrogenase TERM 433 280845 - 280872 + F 89 -9.9 -4.57073 | opp_overlap 280843 GCATATTAAAGAGGT GGAGCGGAG GATATCAAAA CTCCGCTCC TTTTTAGAGGAAGTG glcP 280893 - 282080 + | major facilitator superfamily glucose/mannose:H(+) symporter ycgF 282193 - 282822 + | homoserine/threonine resistance transporter TERM 434 282863 - 282827 - f 100 -17.6 -4.37886 | gap 1, opp_overlap 282827 TGATTGGGTAGAAAA GCAGACTGACATGT-AG CAGA CTGACATGTCAGTCTGC TTTTTTGTAATGATT TERM 435 282827 - 282863 + F 100 -17.6 -5.33785 | gap 1, opp_overlap 282827 TGATTGGGTAGAAAA GCAGACTGACATGT-AG CAGA CTGACATGTCAGTCTGC TTTTTTGTAATGATT BPUM_0285 282923 - 283324 + | hypothetical protein TERM 436 283621 - 283645 + G 82 -4.9 -5.28778 | TGAGGCAGATACATT CCCTTGTGTCC CAG GAAGACAGGGG TTTTTTCTCGATCAT TERM 437 284105 - 284079 - g 73 -3.7 -5.00884 | gap 1 AGTTTGGTCAAAAAA TGAGTCAGCTCG TTCG CAAGCGG-CTCA AAGCGTATGATGAGG TERM 438 284221 - 284200 - g 72 -9.4 -3.19602 | overlap 284198 TCTCCCAGATGAAGA GGCGGAGA AACCTG CCTCCGCC AAATGTCCTTTTACT yqcI 283505 - 284263 + | hypothetical protein ycgH 285610 - 284258 - | APC family amino acid-polyamine-organocation transporter TERM 439 284361 - 284351 - G 75 -2.4 -5.25803 | AAGGCTGATAAAAAA GCCG GGT CGTC CGCTTGCCTCTGTTA ycgI 285690 - 286286 + | hypothetical protein TERM 440 287127 - 287109 - g 76 -6.7 -4.48299 | CTATACTTAAAGAAA CCAACAG CCGAT CTGCTGG ACGACAAACCTCAGC nadE 286485 - 287306 + | NAD synthetase TERM 441 287315 - 287334 + F 81 -7.1 -4.73448 | opp_overlap 287307 GAAATAAGAAAGAGG CCTCTCC AGTGAA GGGGAGG TTTTTAACTGTATAT aroK 287441 - 287998 + | shikimate kinase TERM 442 287992 - 288035 + F 75 -9.9 -2.93316 | opp_overlap 288004, overlap 288004 CTGGGATTTATATTC CAAATAAAAAAAGTCTACC GTTTAG GGTAGACTTTTTTTATTGA TACCTTTTTCTTCGT TERM 443 288004 - 288023 + F 100 -7.9 -5.84381 | opp_overlap 288004, overlap 287992 TTCCAAATAAAAAAA GTCTACC GTTTAG GGTAGAC TTTTTTTATTGATAC TERM 444 288023 - 288004 - f 100 -7.9 -5.95539 | opp_overlap 287992 288004 TTCCAAATAAAAAAA GTCTACC GTTTAG GGTAGAC TTTTTTTATTGATAC dap1 288360 - 289307 + | dihydrodipicolinate synthase BPUM_0292 289385 - 290392 + | transcriptional regulator BPUM_0293 290513 - 291889 + | major facilitator transporter TERM 445 291907 - 291932 + F 83 -5.5 -5.4505 | GACGCATGCAGTGAA GAACTTATTCT AAAG AGGGTAGGTTC TTTTTTATTCAGAGG TERM 446 292097 - 292066 - f 74 -8.9 -3.63627 | opp_overlap 292072, overlap 292072 GCTGTATATTCGAAA TAAAAAGTCTACC GATGAA GGTAGACTTTTTC TATCAGTTTAATTCT TERM 447 292072 - 292091 + F 86 -7.9 -5.01546 | opp_overlap 292066 292072 TATTCGAAATAAAAA GTCTACC GATGAA GGTAGAC TTTTTCTATCAGTTT TERM 448 292091 - 292072 - f 100 -7.9 -5.28942 | opp_overlap 292072, overlap 292066 TATTCGAAATAAAAA GTCTACC GATGAA GGTAGAC TTTTTCTATCAGTTT ycgK 292978 - 293901 + | LysR family transcriptional regulator TERM 449 293927 - 293943 + T 81 -9.4 -3.98661 | opp_overlap 293927 AATTAAATGCAAAAA GCAGGG GGGCA CCCTGC TTTCTAATAAATATC TERM 450 293943 - 293927 - T 90 -9.4 -4.83759 | opp_overlap 293927 AATTAAATGCAAAAA GCAGGG GGGCA CCCTGC TTTCTAATAAATATC ykrU 294732 - 293947 - | cyanide hydratase cah 294970 - 295926 + | cephalosporin-C deacetylase TERM 451 295957 - 295934 - T 75 -3.1 -5.18643 | gap 1, opp_overlap 295934 295937, overlap 295937 CGAATTAAAAGAAAA GAGGCCGCTC GCTAG GAG-GGCTTC TTTCAGGTTGTTGAC TERM 452 295970 - 296008 + T 100 -15.6 -4.18506 | opp_overlap 295976, overlap 295976 TTCTTTCAGGTTGTT GACAAAGGGCTAAAATGA TCT TTATTTTAGCCCTTTATC TTCTTTTCAGCGTGA TERM 453 295976 - 296002 + T 100 -13.2 -4.45253 | opp_overlap 295976, overlap 295970 CAGGTTGTTGACAAA GGGCTAAAATGA TCT TTATTTTAGCCC TTTATCTTCTTTTCA TERM 454 296002 - 295976 - T 84 -11 -3.86015 | opp_overlap 295976 295970 CAGGTTGTTGACAAA GGGCTAAAATGA TCT TTATTTTAGCCC TTTATCTTCTTTTCA TERM 455 296139 - 296160 + T 76 -5.1 -5.1675 | gap 1, opp_overlap 296139, overlap 296145 GTCTACACGCTGAAA GAGGCAGCTC TAG GAGG-GCCTC TTTTTTAATAGCTCG BPUM_0298 296479 - 296165 - | hypothetical protein ycgL 296573 - 297343 + | hypothetical protein TERM 456 297375 - 297351 - f 95 -12.8 -3.79747 | opp_overlap 297351 GGACGTAGGAGGAAA GAGCCAGCCG GATAG CGGCAGGCTC TTTTTTATCTCTTAT TERM 457 297351 - 297375 + F 100 -12.8 -5.48787 | opp_overlap 297351 GGACGTAGGAGGAAA GAGCCAGCCG GATAG CGGCAGGCTC TTTTTTATCTCTTAT TERM 458 297517 - 297533 + G 75 -5.2 -4.82901 | TTATGGAGTCGGTCA CAAGAA ATTTC TTCTTG TTTTTGTCAAAGAGC TERM 459 297890 - 297876 - g 71 -4.2 -4.8667 | GATACGGCAGAAAAA CACCGT ATC ATGGTG ACAATCGATATGGAG TERM 460 298227 - 298208 - g 73 -5.1 -4.7373 | CGAGTTCACGAAAAA TATTGTG AAAAAA CACAATA TACCGACAAGTCAGT TERM 461 298379 - 298391 + G 74 -7.7 -4.05788 | opp_overlap 298385, overlap 298380 TCTTGCAGAACGGCC GGCAA ACA TTGCC TTTGCTTTAAAAGGA ycgM 297504 - 298421 + | proline dehydrogenase ycgN 298445 - 299992 + | 1-pyrroline-5-carboxylate dehydrogenase TERM 462 300002 - 300029 + F 100 -15 -5.69379 | opp_overlap 300002 TTTTAAGTTGGAAAA GCATGAACCTGT ACAC ACGGGTTCATGC TTTTTTTGCTTGTCT TERM 463 300029 - 300002 - f 100 -12.8 -4.14392 | opp_overlap 300002 TTTTAAGTTGGAAAA GCATGAACCTGT ACAC ACGGGTTCATGC TTTTTTTGCTTGTCT TERM 464 301148 - 301136 - g 79 -3.3 -5.27335 | CGTTTGAAAGAAAAA GACCG TGA CAGCC AAACCTCATTTTTAA ycgP 300119 - 301351 + | hypothetical protein TERM 465 301353 - 301343 - f 75 -3.2 -5.27477 | ATGCTAATGAAAAAA GACC AAT AGTC ATCTAATCCGCAGGT TERM 466 301360 - 301387 + F 87 -10.6 -4.3467 | opp_overlap 301360, overlap 301361 CCAATAGTCATCTAA TCCGCAGGTG CCTGGGAT CACCTGCGGG TTTTCATGTGAAAAT TERM 467 301361 - 301386 + F 87 -11.9 -3.2032 | opp_overlap 301360, overlap 301360 CAATAGTCATCTAAT CCGCAGGTG CCTGGGAT CACCTGCGG GTTTTCATGTGAAAA TERM 468 301646 - 301658 + G 76 -7.7 -4.22591 | opp_overlap 301646 GCAAATAGTATGGAA CGCAA CAT TTGCG TTTATTGGCATTATT TERM 469 302237 - 302250 + G 73 -5.9 -4.49377 | GGTCTCCATCATTGT GGGCG GTAT TGCCC TTGTTTTCTTGTGGC arsB 301473 - 302771 + | arsenite-antimonite efflux family transporter membrane protein ArsB TERM 470 302774 - 302824 + T 74 -10.2 -2.62613 | opp_overlap 302788, overlap 302788 GCTGATACATTAAAG CTG-AATATAAAAAAGAGCAGGTC GCTTG GATCTGCTCTTTTTT-TGTTACAG ATATTTGGCATAGCG TERM 471 302810 - 302788 - T 100 -7.7 -5.47159 | opp_overlap 302774 302788 GCTGAATATAAAAAA GAGCAGGTC GCTTG GATCTGCTC TTTTTTTGTTACAGA TERM 472 302788 - 302810 + T 100 -9.9 -5.7946 | opp_overlap 302788, overlap 302774 GCTGAATATAAAAAA GAGCAGGTC GCTTG GATCTGCTC TTTTTTTGTTACAGA yckA 303496 - 302819 - | amino acid ABC transporter ATP-binding protein yckB 304381 - 303509 - | amino acid ABC transporter ATP-binding protein TERM 473 303891 - 303904 + g 86 -8.1 -4.67692 | ATGTAAATCGTTGTG GCAGC ACCA GCTGC TTTCTTTCCTTTTAA TERM 474 304861 - 304843 - g 73 -5.3 -4.64598 | CAATCATTTGAAAAA CAACGGA TTTGT TCCATTG CTGAAAAAACCACAG yckD 304562 - 304891 + | hypothetical protein TERM 475 304917 - 304900 - T 77 -8.4 -3.87346 | opp_overlap 304900 ACCATAAGGATGAAA CCGGCA GCGAGG TGCCGG TTTTTTTGTTTAAGA TERM 476 304900 - 304917 + T 100 -8.4 -5.95539 | opp_overlap 304900 ACCATAAGGATGAAA CCGGCA GCGAGG TGCCGG TTTTTTTGTTTAAGA BPUM_0307 305703 - 304939 - | beta-lactamase lrpA 305819 - 306235 + | Lrp/AsnC family transcriptional regulator TERM 477 306694 - 306681 - g 71 -3.1 -5.00616 | GGCCTGGGGAAAAAA GAAAC ATGA GCTTC TGAAACACCACGCAC yokD 306265 - 307071 + | aminoglycoside N(3')-acetyltransferase nin 307459 - 307073 - | DNA-entry nuclease inhibitor tlpC 309277 - 307580 - | methyl-accepting chemotaxis protein nucA 309833 - 309405 - | nuclease BPUM_0313 309836 - 310231 + | hypothetical protein BPUM_0314 310201 - 312270 + | hydantoin utilization protein A BPUM_0315 312260 - 314245 + | hydantoin utilization protein B BPUM_0316 314242 - 315327 + | ABC transporter ATP-binding protein TERM 478 315419 - 315435 + G 78 -8.7 -3.75738 | opp_overlap 315419 TCTTACGGTGAATGA GGGAGAG TTT TTCTCCC TTCTTGGTCCTAGTG BPUM_0317 315336 - 316427 + | ABC transporter ATP-binding protein TERM 479 316465 - 316482 + F 84 -7.7 -4.79953 | GCGATTTCATTGGTT CATGCTG CTGC CAGCGTG TTTGTTTCTTGTTGT BPUM_0318 316466 - 317296 + | ABC transporter ATP-binding protein TERM 480 318112 - 318136 + F 100 -13.7 -5.25799 | opp_overlap 318111 318110 318107 318114 AATGAAGAAACAAGG GAGCTGTCATT TGA AATGGCAGCTC TTTTTGTATTGTTTT TERM 481 318607 - 318627 + F 70 -7.7 -3.70405 | TTCTTTCCGTATTCT GTCTATTTT AAT GAAATAGAC TTGGTTCTTTTGATA TERM 482 320078 - 320063 - g 79 -6.8 -4.58685 | opp_overlap 320063, overlap 320074 AAATCGTTTGAAAAA CCAGCT GTAA AGCCGG TTCATCACATGTTTG TERM 483 322226 - 322237 + G 75 -5.8 -4.71061 | opp_overlap 322222 322219, overlap 322223 322222 TCATTACATGATCAG GAGC ACCT GCTC TTTTTCGATATGCAT TERM 484 323621 - 323639 + G 70 -9.6 -2.7814 | overlap 323620 ATAAAGATTCGTCTA TCGCCAGA GGA TTTGGCGA ATTTGACCTATACAT TERM 485 326164 - 326180 + G 72 -9.5 -3.08812 | opp_overlap 326162, overlap 326163 ATCGATTGAAAAGTG GAAGGAA TTT TTCCTTC ATTTATTGGAACAAA TERM 486 326481 - 326453 - g 73 -6 -4.44974 | gap 1 TCAAACGGCATAAAA CGAG-GAGATCGC GTCG GCATTCTCACTCG TCCGTCCCTTGACAT TERM 487 328535 - 328515 - g 71 -3.3 -5.0133 | overlap 328520 CACTTCCTGAAAAAA CACACTCTT TCC AAGAATACG CCCAGAAGCTGACGG BPUM_0319 318695 - 329407 + | nonribosomal peptide synthetase subunit TERM 488 332263 - 332251 - g 72 -6.3 -4.24606 | AAGGTAGATCGAAAA GCTTT ACC AAAGC CGGACGAAGCGCATC TERM 489 332300 - 332289 - g 74 -4.4 -4.93296 | overlap 332297 GCATCAGGAGAAAAA GGAA ATCA TTCC GCCTGATACGGAGAC TERM 490 333163 - 333182 + G 78 -7.2 -4.56597 | gap 1 CTGCCAACGGATTAT TCACG-TCC AGC GGAACGTGA TTTTTCAGGAGAACG TERM 491 333895 - 333874 - g 73 -2.9 -5.24129 | CGGTTGGAGAAAAAA GACGAAGTG CAAA CAAATCGTC ATGAGCCTTTCCATG TERM 492 336137 - 336126 - g 70 -3.6 -4.91109 | GCTGTATGAGAAAAA GACG TTAC CGCC AGTTCAGCTGCACTA TERM 493 336199 - 336186 - g 71 -4.5 -4.73613 | overlap 336190 336193 GCAGCAGGAAGAAAA GCAAC GAGC GCTGC TCGAGAAACAGCGTC TERM 494 336202 - 336190 - g 78 -9.1 -3.83868 | overlap 336186 336193 CAGGAAGAAAAGCAA CGAGC GCT GCTCG AGAAACAGCGTCAGT TERM 495 339241 - 339221 - g 79 -8.3 -4.09685 | TCCTACCGCCCAAAA CCCACTCCT TTA AAGAATGGG CAGAGGCGATCGAAC BPUM_0320 329428 - 340116 + | nonribosomal peptide synthetase subunit TERM 496 340344 - 340365 + G 80 -10.2 -3.51934 | overlap 340342 AATGTCATCGTGGAG CGGTACGA TATTTT TCGTACCG TATTTCTCCACGAAA BPUM_0321 340161 - 343994 + | nonribosomal peptide synthetase subunit TERM 497 346450 - 346440 - g 74 -4.6 -4.87592 | overlap 346435 TTATATACAACAAAA GCGA TGG CCGC TTATGAGGAACCTGT BPUM_0322 344058 - 354188 + | nonribosomal peptide synthetase subunit TERM 498 354392 - 354346 - g 72 -7.4 -3.9407 | gap 2, opp_overlap 354351, overlap 354349 354353 CCGAAGAAAAATGAA GAAGGCAGTCTCTCGCTTGTGC TATTT GCACAGGCGAAGGAC--CCTTC GCTGACAAGAGAGGA TERM 499 354387 - 354353 - g 76 -10.7 -2.7056 | opp_overlap 354351, overlap 354349 354346 AAAATGAAGAAGGCA GTCTCTCGCTTGTGC TATTT GCACAGGCGAAGGAC CCTTCGCTGACAAGA TERM 500 354806 - 354778 - g 72 -8.1 -3.84901 | opp_overlap 354779 354804, overlap 354779 GTCATCAAAAACCAA GGCACACCTGTCA CAC TGACAGAGGTGCT AATTCGATCAGCCTT TERM 501 354805 - 354779 - g 81 -11.6 -2.90218 | opp_overlap 354779 354804, overlap 354778 TCATCAAAAACCAAG GCACACCTGTCA CAC TGACAGAGGTGC TAATTCGATCAGCCT TERM 502 354779 - 354805 + G 70 -9.4 -2.75183 | opp_overlap 354779 354778, overlap 354804 TCATCAAAAACCAAG GCACACCTGTCA CAC TGACAGAGGTGC TAATTCGATCAGCCT TERM 503 357021 - 357005 - g 70 -5.1 -4.56597 | TTGGTTTGTTAAAAA CCATCCC GAA AGAATGG GAAGGAGCAGAGGTG TERM 504 358019 - 357987 - g 91 -7.7 -4.83615 | overlap 357988 GACTTTTGAGAAAAA GCTTCTTTACAAGGC GAT GCCTGGAAAAGAAGT ACATGTTGAAGAAAT TERM 505 358018 - 357988 - g 83 -11.2 -3.49687 | overlap 357987 ACTTTTGAGAAAAAG CTTCTTTACAAGGC GAT GCCTGGAAAAGAAG TACATGTTGAAGAAA TERM 506 360116 - 360101 - g 76 -7.6 -4.12532 | opp_overlap 360097 TCCGTGATACACAAA GTGATG TGAT CATCAC TCAGTCTCATTTAAT BPUM_0323 354202 - 362397 + | nonribosomal peptide synthetase subunit TERM 507 362546 - 362518 - g 74 -6.5 -4.56133 | overlap 362544 TTTGAACAACTAAAA GGCACTGCCGAAG TCA CAGCAGCAGAGCC CCCAGGTCATGGAAC TERM 508 362997 - 362983 - g 74 -4.3 -4.9181 | overlap 362987 ACACAAGATGAAAAA TGCAT GCAAG ATGCA AACGGTTGGCTGCCA BPUM_0324 362404 - 363144 + | thioesterase TERM 509 363182 - 363142 - T 73 -9.2 -2.89859 | gap 1, opp_overlap 363142 363151, overlap 363151 CAATTCATAAAACAT TAAAAGAAAGCGGTCCTCC TTAA AG-GGACCGCTTTTTCTTA TGAATTCCGCTTCTT TERM 510 363142 - 363182 + T 73 -9.9 -2.55818 | opp_overlap 363142 363151, overlap 363151 CAATTCATAAAACAT TAAAAGAAAGCGGTCCT CCTTAAA GGGACCGCTTTTTCTTA TGAATTCCGCTTCTT TERM 511 363173 - 363151 - T 84 -7.7 -4.79053 | gap 1, opp_overlap 363142 363151, overlap 363142 AAACATTAAAAGAAA GCGGTCCTCC TTAA AG-GGACCGC TTTTTCTTATGAATT TERM 512 363151 - 363173 + T 100 -8.4 -5.21236 | opp_overlap 363151 363142, overlap 363142 AAACATTAAAAGAAA GCGGTCCT CCTTAAA GGGACCGC TTTTTCTTATGAATT ycxC 364094 - 363180 - | DMT superfamily drug/metabolite transporter TERM 513 365312 - 365300 - g 76 -7.7 -4.10657 | opp_overlap 365300 TGACATGCCTGAAAA GCGAT CAA ATCGC TTATCAACTAGGAGA ycxD 364225 - 365562 + | GntR family transcriptional regulator YcxD sfp 366251 - 365559 - | phosphopantetheinyl transferase BPUM_0328 366931 - 366341 - | hypothetical protein TERM 514 367009 - 366987 - R 86 -7.8 -4.90381 | opp_overlap 366987, overlap 366979 TTTAACACAAGAAAA GCCATTCT TTTTTGT AGAATGGC TTGTTCTTATCGGAT TERM 515 366987 - 367009 + r 74 -7.8 -4.03219 | opp_overlap 366979 366987 TTTAACACAAGAAAA GCCATTCT TTTTTGT AGAATGGC TTGTTCTTATCGGAT yczE 367660 - 367016 - | hypothetical protein BPUM_0330 367845 - 367747 - | hypothetical protein TERM 516 367803 - 367818 + g 88 -3.2 -5.75342 | overlap 367811 CATCAAAACAAGCAG CAAGAC TTTT GGCTTG TTTTTTTTGACAAAG TERM 517 368306 - 368271 - H 70 -8.2 -3.25088 | opp_overlap 368271 368295 CTGGAAATTTATTAA CCGTCTCACCAGCTGT TACG AAAGCCGCTGGGACGG TGGTTGTGAACAATA TERM 518 371644 - 371628 - H 79 -5.1 -5.33026 | overlap 371630 371638 371639 371641 CAACCGAAATAAAAA TTGATCC AAA GGATCCA AAGCTTGAATCAGAA TERM 519 372394 - 372411 + G 79 -7.7 -4.36914 | opp_overlap 372394 AGCCATCCAGCAAAA GGGGGAT ACGG ATTCCCC TTTTGTGCCAAAGGC yhcS1 372257 - 372817 + | C60A subfamily peptidase TERM 520 373012 - 372995 - g 75 -5.5 -4.88495 | ACAGATATAAGAAAA CGGTTGA AAAT TCATCCG CGCGATTTTATGGAG TERM 521 373096 - 373079 - g 74 -7.7 -3.96624 | opp_overlap 373070 TATTGGCAGGACAAA CCCTGTA TCGT CACAGGG GAAGTAACAGGCTCC abrB 372905 - 373207 + | transcription regulator TERM 522 373205 - 373243 + F 95 -14.1 -2.9585 | opp_overlap 373212 373213, overlap 373213 TTGCAAAAGGAAATA TAAAAAAGGCTGTCGAG TTTAT CTCGACAGCTTTATTTA TCTCCTTAAATTTCT TERM 523 373236 - 373212 - f 100 -10 -5.5762 | opp_overlap 373205 373213, overlap 373213 AGGAAATATAAAAAA GGCTGTCGAG TTTAT CTCGACAGCT TTATTTATCTCCTTA TERM 524 373213 - 373235 + F 100 -13.5 -4.64952 | opp_overlap 373212 373213, overlap 373205 GGAAATATAAAAAAG GCTGTCGAG TTTAT CTCGACAGC TTTATTTATCTCCTT TERM 525 373235 - 373213 - f 100 -13.5 -3.92132 | opp_overlap 373213 373205, overlap 373212 GGAAATATAAAAAAG GCTGTCGAG TTTAT CTCGACAGC TTTATTTATCTCCTT TERM 526 373598 - 373626 + F 78 -9.7 -3.25088 | opp_overlap 373604, overlap 373600 373604 ATGACCTCGTTCCTA AGCGAATTCAACT ATA AGTTGAATTCGTA TTACTCAATTTAAAG TERM 527 373600 - 373624 + F 95 -14.5 -3.18776 | opp_overlap 373604, overlap 373598 373604 GACCTCGTTCCTAAG CGAATTCAACT ATA AGTTGAATTCG TATTACTCAATTTAA TERM 528 373604 - 373620 + F 71 -8.1 -3.39717 | opp_overlap 373604, overlap 373600 373598 TCGTTCCTAAGCGAA TTCAACT ATA AGTTGAA TTCGTATTACTCAAT TERM 529 373793 - 373778 - f 70 -4.8 -4.60713 | opp_overlap 373768, overlap 373768 CAAAACATTACAAAA TAGTAA TGAT TTACTA AATAGGAGGAATGTC BPUM_0334 373812 - 374198 + | hypothetical protein TERM 530 374452 - 374481 + G 81 -4.3 -5.40474 | gap 1, opp_overlap 374452 ACCATATTCAAAGAA GCCTCTGA-TGGTG ATA CAAAAGTCAGAGGC TTTTTTTCAAAAGAT TERM 531 374858 - 374874 + G 71 -2.3 -5.19003 | ATCGTGTAATGGGTA CTGAT AAGCAAA ATCAG TTTGTTTTTTATATT BPUM_0335 374230 - 375210 + | hypothetical protein BPUM_0336 375216 - 376502 + | ABC transporter ATP-binding protein TERM 532 377007 - 377020 + G 70 -8.1 -3.64703 | TGTATTCTTGCTGAT GAGCC CACT GGCTC TTTAGATGAGGAAAG BPUM_0337 376503 - 377177 + | ABC transporter ATP-binding protein TERM 533 377323 - 377349 + T 100 -13.8 -5.19212 | opp_overlap 377323 TTGATCATAAAAAAA GGCTGTCCTCAT TAC ATGAGAACAGCC TTTTTTCATCATACT TERM 534 377349 - 377323 - T 100 -16 -5.67063 | opp_overlap 377323 TTGATCATAAAAAAA GGCTGTCCTCAT TAC ATGAGAACAGCC TTTTTTCATCATACT yckI 378101 - 377358 - | L-cystine ABC transporter ATP-binding protein TERM 535 377965 - 377980 + g 73 -5.4 -4.72986 | opp_overlap 377965 TCAAGTGCATTTAAA CAGCGA AGCA TCGTTG TTTTTCCTGAACCTG yckJ 378806 - 378114 - | L-cystine ABC transporter membrane protein TERM 536 378602 - 378581 - G 75 -5.1 -4.88388 | gap 1, overlap 378582 ACAATTGCACAAAAA GCGG-CGTTC CAC GAACGGCCGA CACATAGATGGAAAA TERM 537 378601 - 378582 - G 71 -8.6 -3.51948 | gap 1, overlap 378581 CAATTGCACAAAAAG CGG-CGTTC CAC GAACGGCCG ACACATAGATGGAAA yckK 379608 - 378793 - | L-cystine ABC transporter substrate-binding protein BPUM_0341 380004 - 380588 + | dienelactone hydrolase TERM 538 380676 - 380649 - T 83 -7.1 -4.89519 | opp_overlap 380649 ATAAGAGAAAAGAAA CCAGTATGTAA ATGGAG TTCCATACTGG TTTTTTGTGCGAATA TERM 539 380649 - 380676 + T 91 -7.1 -5.252 | opp_overlap 380649 ATAAGAGAAAAGAAA CCAGTATGTAA ATGGAG TTCCATACTGG TTTTTTGTGCGAATA TERM 540 382344 - 382368 + T 100 -9.9 -5.68438 | opp_overlap 382344 TTAAACTATAAAAAA GAAGCCAACCC AAT GGGCAGGCTTC TTTTTTATTTAATGA TERM 541 382368 - 382344 - T 100 -12.1 -5.42265 | opp_overlap 382344 TTAAACTATAAAAAA GAAGCCAACCC AAT GGGCAGGCTTC TTTTTTATTTAATGA BPUM_0343 383870 - 382377 - | POT family proton (H+)-dependent oligopeptide transporter TERM 542 384551 - 384540 - g 78 -5.8 -4.8622 | opp_overlap 384539 CCCCTGAACGAAAAA CCCA TGAG TGGG GCTTTGGGATATGTA yclG 384110 - 385918 + | hypothetical protein yxeK 386119 - 387444 + | nitrilotriacetate monoxygenase TERM 543 387439 - 387429 - f 71 -3.2 -5.13473 | AGCACAGCCAAAAAA TCGC TAC ACGA CATAAAGGTGAGGTG yxeL 387462 - 387965 + | hypothetical protein yxeM 387988 - 388782 + | amino acid ABC transporter ATP-binding protein yxeN 388807 - 389481 + | amino acid ABC transporter ATP-binding protein yxeO 389494 - 390240 + | amino acid ABC transporter ATP-binding protein TERM 544 390223 - 390245 + F 71 -4 -4.93696 | ATCCAAAAAGAAGCA GCGGCTGAAG AAG CATAAGCTGC TTTTTACTCTTTAGA TERM 545 390392 - 390382 - g 71 -2.4 -5.243 | GAAACGACTAAAAAA CTGC GCA GCTG GTTAGAAGAGGAGGG yxeP 390274 - 391431 + | M20D subfamily unassigned peptidase yxeQ 391422 - 392756 + | MmgE/PrpD family protein TERM 546 392792 - 392765 - T 100 -18.6 -4.2704 | opp_overlap 392769, overlap 392782 GGCATGATCAAGAAA GAGAGCTCACCT TAAT AGGTGAGCTCTC TCAGCGTGTAGACAA TERM 547 392769 - 392788 + T 87 -12.2 -2.89191 | opp_overlap 392765 392782 TGATCAAGAAAGAGA GCTCACCT TAAT AGGTGAGC TCTCTCAGCGTGTAG TERM 548 392962 - 392918 - T 100 -16.7 -4.12188 | opp_overlap 392927, overlap 392921 392923 392927 CTATCACGCTGAAAA GGAGACAAAGGGCTAAAATAA AGA TCATTTTAGCCCTTTGTCAAC AATCTGAGAGAGCTC TERM 549 392959 - 392921 - T 100 -21.4 -3.09004 | opp_overlap 392927, overlap 392918 392923 392927 TCACGCTGAAAAGGA GACAAAGGGCTAAAATAA AGA TCATTTTAGCCCTTTGTC AACAATCTGAGAGAG TERM 550 392957 - 392923 - T 100 -18.2 -3.10091 | opp_overlap 392927, overlap 392921 392918 392927 ACGCTGAAAAGGAGA CAAAGGGCTAAAATAA AGA TCATTTTAGCCCTTTG TCAACAATCTGAGAG TERM 551 392953 - 392927 - T 100 -13.2 -4.20797 | opp_overlap 392927, overlap 392923 392921 392918 TGAAAAGGAGACAAA GGGCTAAAATAA AGA TCATTTTAGCCC TTTGTCAACAATCTG TERM 552 392927 - 392953 + T 86 -11 -3.87373 | opp_overlap 392927 392923 392921 392918 TGAAAAGGAGACAAA GGGCTAAAATAA AGA TCATTTTAGCCC TTTGTCAACAATCTG TERM 553 393035 - 393048 + T 100 -2.3 -6.06723 | opp_overlap 393035, overlap 393037 ACTTCGAGAAAAAAG TGGGG GTTT CACCA TTTTTTTTTGAAAAA TERM 554 393081 - 393106 + T 100 -13.4 -3.98747 | TCATGTGTTTTTACG CTGGACATGG TACTTT CCATGTCCAG TTTGCTAGTTTTTTA BPUM_0352 394431 - 393076 - | transposase TERM 555 393192 - 393202 + g 81 -5.4 -5.10933 | GAAGTTTCGTCCAAC GCAT ACC ATGC TTTTCTTTTGCATCC TERM 556 393467 - 393450 - G 80 -9.9 -3.73859 | TACGATAAGAGAGAA TTTGCCC GTTG GGGCAAA TGTAACAATCAAAAT TERM 557 393800 - 393824 + g 100 -9.3 -5.02645 | overlap 393804 ACATAATAGCCACTC TCTGGGTCAGT TGT ACTGACCTTGA TTTCTTTTGTTTCTT TERM 558 393804 - 393820 + g 88 -10.9 -3.85719 | overlap 393800 AATAGCCACTCTCTG GGTCAGT TGT ACTGACC TTGATTTCTTTTGTT TERM 559 394010 - 394023 + g 75 -3.1 -5.18357 | gap 1, overlap 394010 ATGAAGGCGATAGAC GGG-TC AAC GAGCCC TTTTTTCATCGCTTC TERM 560 394500 - 394478 - H 100 -15 -5.39721 | overlap 394499 TTATTATACAAAAAA GCTTGTAGAC TTT GTCTACAAGC TGTGAGCTCACCTTA TERM 561 394502 - 394529 + H 100 -14.2 -3.67296 | opp_overlap 394500 394499, overlap 394504 CTTTGTCTACAAGCT GTGAGCTCACCT TAAT AGGTGAGCTCTC TTTACGTACGTAATC TERM 562 394504 - 394527 + H 100 -15.4 -3.41569 | opp_overlap 394500 394499, overlap 394502 TTGTCTACAAGCTGT GAGCTCACCT TAAT AGGTGAGCTC TCTTTACGTACGTAA BPUM_0353 394722 - 395405 + | response regulator TERM 563 395630 - 395660 + G 75 -10.6 -2.80816 | opp_overlap 395630 TCTCGACAAGACAAA TTCGCTTTTTCGTC TTT GATGAAAAAGGGAA TGTACTGACTCAGCA TERM 564 395660 - 395630 - g 82 -8.4 -4.27117 | opp_overlap 395630 TCTCGACAAGACAAA TTCGCTTTTTCGTC TTT GATGAAAAAGGGAA TGTACTGACTCAGCA BPUM_0354 395395 - 396822 + | sensor histidine kinase TERM 565 396809 - 396842 + T 100 -15.5 -3.50251 | opp_overlap 396811 396816, overlap 396811 396816 GTTTACCGCTGTCAC AACAAAAGGGCTAAC TGAT GTTAGCCCTTTTGTG TTCATTCCTTATTCC TERM 566 396811 - 396840 + T 100 -18.1 -3.314 | opp_overlap 396811 396816, overlap 396809 396816 TTACCGCTGTCACAA CAAAAGGGCTAAC TGAT GTTAGCCCTTTTG TGTTCATTCCTTATT TERM 567 396840 - 396811 - T 100 -18.1 -3.29144 | opp_overlap 396811 396809 396816, overlap 396816 TTACCGCTGTCACAA CAAAAGGGCTAAC TGAT GTTAGCCCTTTTG TGTTCATTCCTTATT TERM 568 396835 - 396816 - T 100 -12.2 -4.77165 | opp_overlap 396811 396809 396816, overlap 396811 GCTGTCACAACAAAA GGGCTAAC TGAT GTTAGCCC TTTTGTGTTCATTCC TERM 569 396816 - 396835 + T 100 -12.2 -4.73864 | opp_overlap 396816 396811, overlap 396811 396809 GCTGTCACAACAAAA GGGCTAAC TGAT GTTAGCCC TTTTGTGTTCATTCC BPUM_0355 397696 - 396851 - | hypothetical protein TERM 570 397312 - 397338 + g 70 -9.4 -2.77235 | GCTCATCTGTGAATT GTTGCGGCCTTG AAT CAAGCCCGCAAA TCGTTCCGTAGTTCG TERM 571 397854 - 397828 - R 100 -13.1 -5.55769 | gap 1, opp_overlap 397825 GGCGAGAACAAAAAA GGCTGCC-GATC CTGA GATCTGGCAGCC TGCTCATTAAAGAGA yclM 399237 - 397861 - | aspartate kinase TERM 572 399403 - 399382 - R 100 -8 -5.23316 | gap 1, opp_overlap 399382 GAGTATATGAAAAAA GAGC-CGGC GATAT GCCGAGCTC TTTTTCTTATGAAGA TERM 573 399382 - 399403 + r 100 -8.7 -5.18726 | gap 1, opp_overlap 399382 GAGTATATGAAAAAA GAGC-CGGCG ATA TGCCGAGCTC TTTTTCTTATGAAGA ycnB 400843 - 399410 - | major facilitator superfamily multidrug:cation symporter TERM 574 400649 - 400664 + g 78 -9 -3.87815 | TAAGAAAGCCGTGAT CGGGAT GAGG ATCCCG TTTGTCAGCATAAAG ycnC 401759 - 400860 - | transcriptional regulator TERM 575 401458 - 401473 + g 70 -7.6 -3.64369 | TTCTCTTTAAACTCT TCAAGC TCAA GCTTGA TCTTCTTTGTGAATT TERM 576 401862 - 401843 - R 93 -7.2 -5.59564 | opp_overlap 401838 401843 AGAAACTTAAAAAAA TACCTATC TTAT GACAGGTA TTTTATCCTTCTGCA TERM 577 401843 - 401862 + r 70 -5 -4.58466 | opp_overlap 401843, overlap 401838 AGAAACTTAAAAAAA TACCTATC TTAT GACAGGTA TTTTATCCTTCTGCA BPUM_0359 402239 - 401865 - | hypothetical protein TERM 578 402352 - 402335 - H 81 -7.1 -4.78237 | TATGTTAGAACAAAA TACGATA CATT TATCGTA TGAATAATCCAACCC yczG 402352 - 402663 + | transcription regulator ArsR TERM 579 402662 - 402691 + T 93 -10.1 -4.88918 | gap 1, opp_overlap 402668, overlap 402656 402664 402677 ATAAAGAGCGGTGGT AAGCCAGCTG-TCT AGT AGAGCAGCTGGCTG TTTTATTTCCCATAA TERM 580 402664 - 402689 + T 100 -12.7 -4.06281 | gap 1, opp_overlap 402668, overlap 402656 402662 402677 AAAGAGCGGTGGTAA GCCAGCTG-TCT AGT AGAGCAGCTGGC TGTTTTATTTCCCAT gabR 404118 - 402694 - | GntR/MocR family transcriptional regulator TERM 581 404196 - 404186 - H 73 -2.6 -5.23316 | TATCATACCAAAAAA TATT CAG AATA ATAAAAAAGACATAA gabT 404227 - 405543 + | 4-aminobutyrate aminotransferase TERM 582 405836 - 405852 + GF 71 -6.5 -4.06361 | AATCCGCTTTTGTCT CGGCATG GGG CGTGCTG TTTGGTTATGTCTCG TERM 583 406765 - 406792 + GF 85 -4 -5.43974 | overlap 406770 TATTGGCGGACGACA GGCGTTTTAGCC ATCG GGCTGAGTCTCC TTTTTCTTTCATTTT BPUM_0363 405565 - 406953 + | APC family amino acid-polyamine-organocation transporter gabD 406928 - 408322 + | succinate-semialdehyde dehydrogenase (NAD(P)(+)) TERM 584 408357 - 408333 - T 70 -5 -4.6644 | gap 1 AATAGACGTGAAAAA GACTGCC-TGA GGAA TCTTGGCAGTC TCAGCGTGTAGACAA TERM 585 408511 - 408486 - T 79 -8.3 -4.18506 | opp_overlap 408483 TCACGCTGAAAAGAA GACAAAGGGCA ATTT CGTCCTTTGTC AACTATCTGTGACTG TERM 586 408522 - 408546 + T 100 -10.8 -5.47159 | gap 1 TTGTCAACTATCTGT GACTGCCTGAG AAAT CTC-GGCAGTC TTTTTTATGTTAAAC BPUM_0365 409152 - 408556 - | NAD(P)H dehydrogenase (quinone) TERM 587 409298 - 409273 - g 100 -12.7 -4.8743 | opp_overlap 409265 409277 GTGAAAAGAAACAAA GCGATCGTTTC TATG AAAACGATCGC TTACGAATCAATTAT BPUM_0366 409168 - 409323 + | hypothetical protein ycnI 409924 - 409310 - | hypothetical protein ycnJ 411575 - 409941 - | copper (Cu) export protein TERM 588 410356 - 410372 + g 74 -6.5 -4.54608 | opp_overlap 410361, overlap 410357 410361 410362 ATCATCCACTCAGCA CGTAACG AAA CGTTTCG TTTCTGTTTCTTTTC TERM 589 410361 - 410378 + g 71 -4.9 -4.67651 | gap 1, opp_overlap 410361, overlap 410356 410357 410362 CCACTCAGCACGTAA C-GAAACG TTT CGTTTCTG TTTCTTTTCCCATCT TERM 590 410362 - 410376 + g 77 -8.6 -3.94471 | opp_overlap 410361, overlap 410356 410361 410357 CACTCAGCACGTAAC GAAACG TTT CGTTTC TGTTTCTTTTCCCAT TERM 591 411650 - 411638 - H 72 -7.7 -3.75461 | GAAAGCGGCAGTAAA CTGTG AGT CACAG AAAAAACCGCTCCTC TERM 592 413180 - 413163 - g 82 -6.9 -4.75309 | opp_overlap 413165, overlap 413165 TGAAAGGGAAGAAAA GTGCAGC AGCA GCTGCTC TTACAGCTCAAAAAG mtlA 412082 - 413524 + | PTS family mannitol-permease II, BC component BPUM_0370 413621 - 414055 + | hypothetical protein TERM 593 414316 - 414333 + G 71 -7 -4.12902 | opp_overlap 414316 CCGATTTGATTACAA CAGCTG TTGGAC CAGCTG TTTTGAAGATCATTG mtlD 414057 - 415178 + | mannitol-1-phosphate 5-dehydrogenase TERM 594 415175 - 415223 + F 79 -4.2 -5.243 | gap 1, opp_overlap 415179 415188, overlap 415176 415179 415188 GAAAGAAACAACTCG ATAATCAGAAAAATCCCTTTC CAACGAGT GAAAGGGATTTTT-TGATGAC TTTTTTAATACTTTA TERM 595 415176 - 415222 + F 72 -7.7 -3.72953 | gap 1, opp_overlap 415179 415188, overlap 415175 415179 415188 AAAGAAACAACTCGA TAATCAGAAAAATCCCTTTC CAACGAGT GAAAGGGATTTTT-TGATGA CTTTTTTAATACTTT TERM 596 415179 - 415219 + F 73 -9.4 -2.94298 | gap 1, opp_overlap 415179 415188, overlap 415176 415175 415188 GAAACAACTCGATAA TCAGAAAAATCCCTTTC CAACGAGT GAAAGGGATTTTT-TGA TGACTTTTTTAATAC TERM 597 415219 - 415179 - f 77 -9.4 -3.4082 | gap 1, opp_overlap 415179 415176 415175 415188, overlap 415188 GAAACAACTCGATAA TCAGAAAAATCCCTTTC CAACGAGT GAAAGGGATTTTT-TGA TGACTTTTTTAATAC TERM 598 415188 - 415211 + F 88 -6.8 -5.19261 | opp_overlap 415179 415188, overlap 415179 415176 415175 CGATAATCAGAAAAA TCCCTTTC CAACGAGT GAAAGGGA TTTTTTGATGACTTT TERM 599 415211 - 415188 - f 81 -6.8 -5.01535 | opp_overlap 415188 415179 415176 415175, overlap 415179 CGATAATCAGAAAAA TCCCTTTC CAACGAGT GAAAGGGA TTTTTTGATGACTTT BPUM_0372 415278 - 417026 + | methyl accepting chemotaxis protein BPUM_0373 417253 - 417645 + | hypothetical protein TERM 600 417672 - 417655 - T 86 -5.6 -5.56568 | opp_overlap 417655 ATATGATCAAAAAAA GAACAG TGCAAG CTGTTC TTTTTTACTTGAACC TERM 601 417655 - 417672 + T 84 -6.3 -5.26875 | opp_overlap 417655 ATATGATCAAAAAAA GAACAGT GCAA GCTGTTC TTTTTTACTTGAACC yycQ 417916 - 417677 - | hypothetical protein BPUM_0375 418235 - 417942 - | hypothetical protein BPUM_0376 418637 - 418260 - | glyoxylase family protein BPUM_0377 418822 - 419091 + | hypothetical protein TERM 602 419105 - 419120 + F 100 -9 -5.37043 | opp_overlap 419105 419107 AAGCCAATCTGAAGA GACCTG TAAC CAGGTC TTTTTTCTATAGGAT TERM 603 419120 - 419105 - f 70 -9 -3.10236 | opp_overlap 419105, overlap 419107 AAGCCAATCTGAAGA GACCTG TAAC CAGGTC TTTTTTCTATAGGAT ycsE 419219 - 419974 + | HAD superfamily hydrolase TERM 604 420011 - 419984 - f 100 -4.1 -6.11392 | opp_overlap 419988, overlap 419985 419988 AAATAAATAAAAAAA CGAACGAGAGG TGAAAT CCTCTCGTTTT TTTATTTCTCCTAGT TERM 605 420010 - 419985 - f 79 -7.6 -4.21345 | opp_overlap 419988, overlap 419984 419988 AATAAATAAAAAAAC GAACGAGAGG TGAAAT CCTCTCGTTT TTTTATTTCTCCTAG TERM 606 420007 - 419988 - f 82 -9.3 -4.14454 | opp_overlap 419988, overlap 419985 419984 AAATAAAAAAACGAA CGAGAGG TGAAAT CCTCTCG TTTTTTTATTTCTCC TERM 607 419988 - 420007 + F 100 -9.3 -6.02919 | opp_overlap 419988 419985 419984 AAATAAAAAAACGAA CGAGAGG TGAAAT CCTCTCG TTTTTTTATTTCTCC ycsF 420145 - 420903 + | hypothetical protein ycsG 420930 - 422147 + | manganese transporter NRAMP ycsI 422153 - 422944 + | hypothetical protein kipI 422963 - 423709 + | allophanate hydrolase subunit 1 TERM 608 424235 - 424217 - g 74 -6.6 -4.28375 | overlap 424208 424228 CTAATAGACTCAAAA GCCATCTG AAA CAGGCGGC GTACAGCGCACCCGA TERM 609 424305 - 424324 + G 73 -2.8 -5.20328 | gap 1 ATCGCCAGTGATTCG GGTG-CTAC CAG GGAGACACC TTTCTTTTTTTCAAG kipA 423706 - 424719 + | allophanate hydrolase subunit 2 kipR 424735 - 425496 + | IclR family transcriptional regulator TERM 610 425524 - 425500 - T 100 -10.8 -5.5454 | opp_overlap 425500 CTAAACAAATAAAAA GCCAATGACC GTAAA GATCATTGGC TTTTTGCGTGCAGTT TERM 611 425500 - 425524 + T 86 -8.6 -4.67011 | opp_overlap 425500 CTAAACAAATAAAAA GCCAATGACC GTAAA GATCATTGGC TTTTTGCGTGCAGTT acpD 426177 - 425542 - | azoreductase lipC 426581 - 427213 + | lipolytic enzyme LipC TERM 612 427208 - 427229 + F 93 -5.2 -5.73672 | opp_overlap 427208 CAATCCTGTAAACAG CTGTAATC CATTGT GATTGCAG TTTTTTTCATTCTTT BPUM_0387 427303 - 428382 + | choloylglycine hydrolase TERM 613 430202 - 430159 - g 82 -5.8 -5.0666 | gap 1, opp_overlap 430165, overlap 430161 430192 CATCGAAAAAAGAAA GGCGATGCCGCAGCATGA-GG CAA CCATCAAGCAGCTGCTTCGTC AGCTTGAAGAGGAAG mtlR 428513 - 430600 + | MtlR transcriptional regulator TERM 614 430633 - 430609 - T 88 -3.5 -5.80364 | gap 1, opp_overlap 430609 ATGGTAAGAAAAAAA GCCGAG-CGC TTATTC GCTTCTCGGC TTTTTGGCTGTGACA ydaC 431274 - 430618 - | hypothetical protein ydaD 431385 - 432254 + | short chain dehydrogenase TERM 615 432288 - 432263 - f 76 -10.4 -2.51207 | opp_overlap 432264, overlap 432255 432262 432261 TACATGATCAAAAGC GCACCGCCCA CTTGAT TGGGCGGTGT TTAGTATTTCTTGCG TERM 616 432264 - 432287 + F 100 -13.9 -4.07859 | opp_overlap 432255 432263 432262 432261 ACATGATCAAAAGCG CACCGCCCA CTTGAT TGGGCGGTG TTTAGTATTTCTTGC TERM 617 432614 - 432596 - g 75 -5.3 -4.76075 | gap 1 ATTAGATGAACAAAA GGTCG-GA ACAC TCGCGACC GTTGAACAGGATAAG ydaG 432543 - 432965 + | general stress protein BPUM_0392 433140 - 432991 - | hypothetical protein TERM 618 433046 - 433033 - G 75 -5.3 -4.82091 | opp_overlap 433033 AAGCAAATAAATAAA GAAAG TAAA CTTTC TTTTTTCTATGACAT TERM 619 433033 - 433046 + g 84 -5.3 -5.37043 | opp_overlap 433033 AAGCAAATAAATAAA GAAAG TAAA CTTTC TTTTTTCTATGACAT TERM 620 433427 - 433394 - R 79 -9.6 -3.77302 | opp_overlap 433400, overlap 433390 433400 GCATGATAAAAGCAA GGAAGAGGCTGCCA TCTATT TGGCAGCCTTTTTC ATTGGGTTAAACAAT TERM 621 433400 - 433421 + r 100 -11.6 -4.90013 | opp_overlap 433394 433390 433400 TAAAAGCAAGGAAGA GGCTGCCA TCTATT TGGCAGCC TTTTTCATTGGGTTA TERM 622 433421 - 433400 - R 84 -11.6 -3.3352 | opp_overlap 433400, overlap 433394 433390 TAAAAGCAAGGAAGA GGCTGCCA TCTATT TGGCAGCC TTTTTCATTGGGTTA BPUM_0393 433767 - 433585 - | hypothetical protein BPUM_0394 433999 - 433781 - | hypothetical protein TERM 623 435920 - 435900 - g 84 -6.1 -4.9934 | AGAACAGGAGAAAAA GCCGATCTC GTC GACATCAGC GGTCAGTTGAAAATG BPUM_0395 434142 - 436412 + | hypothetical protein TERM 624 436557 - 436583 + T 100 -18.2 -4.87893 | opp_overlap 436557 TGAAAAGAAGAAAAA GGGCTAAAACGA ATT TCGTTTTAGCCC TTTTTGATTAAGCTT TERM 625 436583 - 436557 - T 100 -18.2 -5.4593 | opp_overlap 436557 TGAAAAGAAGAAAAA GGGCTAAAACGA ATT TCGTTTTAGCCC TTTTTGATTAAGCTT ydzA 436887 - 436591 - | hypothetical protein ydhC 437698 - 437024 - | GntR family transcriptional regulator TERM 626 437232 - 437208 - G 79 -6.6 -4.6644 | gap 1, opp_overlap 437208 437207 AAGATACGGCAAAAA TGAATCA-GTG CGTT CACATGATTCA ATTGTTTATATAAGC BPUM_0398 437736 - 438017 + | hypothetical protein TERM 627 438092 - 438076 - f 100 -12.3 -4.53439 | GTAAACTCAAATAAA CGGTCGA CCG TCGACCG ACAATAAAGGGGGAG ycsA 438114 - 439169 + | tartrate dehydrogenase TERM 628 441226 - 441185 - g 70 -2.9 -4.96996 | gap 1, overlap 441186 441187 441189 GGCAAAGAAAACAAA CGCACGCTGCCCAAACTGTC ATA AAAAGCTCGAGCTGCGCG-G AGAAGGCGATGGCAA topB 439242 - 441428 + | DNA topoisomerase III TERM 629 441440 - 441459 + F 100 -13.6 -4.76312 | opp_overlap 441440 ATAGTTCTATATAAA CCCATGCG GAAA CGCATGGG TTTTTCAATGTTATC TERM 630 441459 - 441440 - f 100 -13.6 -4.04474 | opp_overlap 441440 ATAGTTCTATATAAA CCCATGCG GAAA CGCATGGG TTTTTCAATGTTATC TERM 631 441890 - 441872 - g 80 -3.9 -5.40072 | CTTGTTCGAAAAAAA GACCAAA ATTTA TTTGATC AACAGTTAGGTGTTT TERM 632 441986 - 441969 - g 80 -2.7 -5.4756 | opp_overlap 441969 441970, overlap 441970 AATCTGAACAAAAAA GTAAAGC CAAT GCTTTAG TTGATGATTTACGTG TERM 633 442312 - 442274 - g 86 -3.3 -5.64274 | gap 1, overlap 442262 442259 GCACCGAGAAAAAAA GGATTTTTTC-CTAAGTC CTAT GACATAAAGAAAAAAACC TATTCATTCGATCAA ydaJ 441626 - 442708 + | hypothetical protein ydaK 442689 - 443540 + | hypothetical protein TERM 634 444753 - 444765 + G 74 -10.5 -2.60941 | opp_overlap 444751 444748, overlap 444752 CACTTGGAAATCAGT CGGCG CAT CGCCG CTTGTGACGTCTCCT ydaL 443530 - 445245 + | hypothetical protein ydaM 445238 - 446506 + | glycosyltransferase TERM 635 447435 - 447424 - g 71 -3 -5.03145 | overlap 447429 TAATTGCTGAAAAAA TCAA TGTT TTGA CTCAGCCAGAACTGA ydaN 446529 - 448598 + | hypothetical protein TERM 636 448868 - 448835 - f 81 -9.6 -3.96216 | opp_overlap 448837, overlap 448819 448837 CTGTGATCTAAACAA TAGACACAGGGGCA TTCTAT TGCCTCTGTGTCTT TTTGGCGATCCATCT TERM 637 448837 - 448866 + F 100 -14.4 -4.60041 | opp_overlap 448819 448835 448837 GTGATCTAAACAATA GACACAGGGGCA TTCTAT TGCCTCTGTGTC TTTTTGGCGATCCAT TERM 638 448866 - 448837 - f 90 -12.2 -3.57185 | opp_overlap 448837, overlap 448819 448835 GTGATCTAAACAATA GACACAGGGGCA TTCTAT TGCCTCTGTGTC TTTTTGGCGATCCAT TERM 639 449680 - 449658 - g 70 -2.6 -5.02074 | CCATCTTTTAAAAAA CCGGCTGC TCAAAAT GCAGCAAG AACATTATTGATGAT TERM 640 450656 - 450646 - g 82 -3.2 -5.42259 | TTATCCCGAAAAAAA GATG GCA CACC ATTTTGCATAATCAA ydaO 448926 - 450752 + | APC family amino acid-polyamine-organocation transporter ydaP 450823 - 452544 + | pyruvate oxidase TERM 641 452557 - 452582 + F 100 -10.5 -5.67967 | opp_overlap 452557 TAAACACACAAGGTA GTCGGTCTTCT GAAA AGAAGGCTGAC TTTTTTTGTGATGAT yqcG 452781 - 454334 + | hypothetical protein BPUM_0409 454339 - 454818 + | hypothetical protein TERM 642 454863 - 454833 - f 75 -8.3 -3.83724 | opp_overlap 454834 454835 454838, overlap 454834 454838 ACTAGAGAACGTAAA TGGAACGATGGAC TAATT GTCCATCGTTCTC TTTCAAAGCATGTAA TERM 643 454834 - 454863 + F 85 -11.6 -3.55071 | gap 1, opp_overlap 454833 454834 454838, overlap 454835 454838 CTAGAGAACGTAAAT G-GAACGATGGAC TAATT GTCCATCGTTCTC TTTCAAAGCATGTAA TERM 644 454862 - 454834 - f 82 -11.8 -2.89511 | opp_overlap 454834 454835 454838, overlap 454833 454838 CTAGAGAACGTAAAT GGAACGATGGAC TAATT GTCCATCGTTCT CTTTCAAAGCATGTA TERM 645 454835 - 454861 + F 100 -15.3 -3.35224 | opp_overlap 454834 454833 454838, overlap 454834 454838 TAGAGAACGTAAATG GAACGATGGAC TAATT GTCCATCGTTC TCTTTCAAAGCATGT TERM 646 454858 - 454838 - f 82 -11.2 -3.31183 | opp_overlap 454835 454834 454838, overlap 454834 454833 AGAACGTAAATGGAA CGATGGAC TAATT GTCCATCG TTCTCTTTCAAAGCA TERM 647 454838 - 454858 + F 84 -11.2 -3.81488 | opp_overlap 454838 454834 454833, overlap 454835 454834 AGAACGTAAATGGAA CGATGGAC TAATT GTCCATCG TTCTCTTTCAAAGCA BPUM_0410 455086 - 455310 + | hypothetical protein TERM 648 455348 - 455314 - T 91 -9.4 -5.06414 | opp_overlap 455319, overlap 455319 CCGCCTCAATAAAAA TGAAACCACCTTTCCA TCG TGAAAAGGTGGTTTTT GTTTAGGATGGTGTT TERM 649 455319 - 455343 + T 100 -11.5 -5.28942 | opp_overlap 455319 455314 TCAATAAAAATGAAA CCACCTTTCCA TCG TGAAAAGGTGG TTTTTGTTTAGGATG TERM 650 455343 - 455319 - T 100 -13.7 -4.43037 | opp_overlap 455319, overlap 455314 TCAATAAAAATGAAA CCACCTTTCCA TCG TGAAAAGGTGG TTTTTGTTTAGGATG BPUM_0411 455614 - 455351 - | hypothetical protein ydaF 456282 - 455713 - | acetyltransferase TERM 651 456350 - 456334 - R 79 -4.4 -5.27938 | opp_overlap 456334, overlap 456328 ATTTGGAAAGAAAAA GACAGC TCAAC ACTGTC TTTTACATAAACGTA mntH 457630 - 456353 - | manganese transport protein MntH TERM 652 456817 - 456807 - G 74 -4.6 -4.77173 | TTTTTATAAAATAAA GCGG CAG CCAC AATCAACATGCTGGC TERM 653 456884 - 456896 + g 81 -5.5 -5.09245 | opp_overlap 456884 ATCTAAAAACTCAAA GCGGA AAA TCTGC TTTTTCTCCTTTTCC TERM 654 457822 - 457804 - R 100 -11 -5.47431 | CCAACACATAAAAAA CACCGCCT TTT AGACGGTG TCCCTACTGCTTCCT ydaS 458113 - 457853 - | hypothetical protein TERM 655 458183 - 458165 - H 77 -6.8 -4.57341 | opp_overlap 458154 AACCGTTTTGAAAAA GTTTCAAA CCT TTCGAAAC CGCTTCAATGTTCTA TERM 656 458764 - 458750 - g 71 -4.3 -4.87389 | GATCCTAAAAACAAA GAAGA GCGGG TCTTC ATCATAAAATGCTTA TERM 657 458950 - 458963 + G 70 -3.8 -4.86731 | ACTATTTCAGCTTGT TCCC GTAGCA GGGA TTTTATTTGGCGCAG ydbA 458270 - 459100 + | ABC transporter ATP-binding protein TERM 658 459272 - 459233 - T 100 -13.8 -3.66784 | opp_overlap 459239, overlap 459235 459239 TCACGCTGAATAGAA GACAAAGGGCTAAAATGA AGAT TCATTATAGCCCTTTGTT AACAATCTGAAATCC TERM 659 459270 - 459235 - T 100 -16.4 -3.41292 | opp_overlap 459239, overlap 459233 459239 ACGCTGAATAGAAGA CAAAGGGCTAAAATGA AGAT TCATTATAGCCCTTTG TTAACAATCTGAAAT TERM 660 459266 - 459239 - T 93 -11.4 -4.34444 | opp_overlap 459239, overlap 459235 459233 TGAATAGAAGACAAA GGGCTAAAATGA AGAT TCATTATAGCCC TTTGTTAACAATCTG TERM 661 459239 - 459266 + T 90 -11.4 -4.17556 | opp_overlap 459239 459235 459233 TGAATAGAAGACAAA GGGCTAAAATGA AGAT TCATTATAGCCC TTTGTTAACAATCTG TERM 662 459285 - 459301 + T 100 -6.6 -5.69793 | opp_overlap 459285 GTTAACAATCTGAAA TCCCTT ACTCA AAGGGA TTTTTTATTTGGTCT dctB 460403 - 459306 - | TRAP-T family tripartite ATP-independent periplasmic binding protein dctS 460627 - 462090 + | histidine kinase TERM 663 462299 - 462273 - g 78 -2.2 -5.45726 | overlap 462262 462275 TATATGCCAAAAAAA GATGGCATGAAG ACG CTTCAAGACATT AGAAAGCAAAAGATA dctR 462087 - 462770 + | response regulator dctP 462895 - 464163 + | C4-dicarboxylate transporter DctA TERM 664 464182 - 464210 + F 90 -6.8 -5.64304 | gap 1, opp_overlap 464177 464182 AAAAACAACCCAAAA CCGAAACCTTATG TCTA CATGGGGTT-CGG TTTTTTCTTGTGTTG TERM 665 464331 - 464307 - f 86 -10.9 -4.10179 | overlap 464301 TATAATTTACAGAAA GATCCGATATA ATG TATATCAGATC CAATGAAAAATAGAC TERM 666 464702 - 464686 - g 73 -3.7 -4.9448 | ATTTAGGAAAGAAAA TTGCAGA CCA TCCACAA AATTTACCCTTCTTT ydbI 464373 - 465395 + | hypothetical protein TERM 667 465410 - 465399 - f 71 -4.4 -4.72386 | opp_overlap 465399 GAAAGTAGTTAAAAA GTTC ACTT GAAC CTGTTTACAATTTTC TERM 668 465553 - 465538 - f 73 -2.5 -5.24129 | TCTGTTGAGAAAAAA GGACA TCTCTT CGTCC TAACCCGTCAGCTAA TERM 669 465652 - 465609 - f 76 -8.8 -3.70902 | opp_overlap 465617, overlap 465611 465614 GGTGGTATATGTAAA GACACGCAGACCCACGAGAA AACT CTCTCGTGGGTCTTTTTGAC GAGGAAGGGGAGATT TERM 670 465650 - 465611 - f 79 -10 -3.43773 | opp_overlap 465617, overlap 465609 465614 TGGTATATGTAAAGA CACGCAGACCCACGAGAA AACT CTCTCGTGGGTCTTTTTG ACGAGGAAGGGGAGA TERM 671 465647 - 465614 - f 76 -10.3 -2.56838 | opp_overlap 465617, overlap 465611 465609 TATATGTAAAGACAC GCAGACCCACGAGAA AACT CTCTCGTGGGTCTTT TTGACGAGGAAGGGG TERM 672 465617 - 465644 + F 100 -15.7 -4.56597 | opp_overlap 465614 465611 465609 ATGTAAAGACACGCA GACCCACGAGA AAACTC TCTCGTGGGTC TTTTTGACGAGGAAG BPUM_0421 465671 - 466912 + | DAACS family dicarboxylate/amino acid:cation symporter TERM 673 466953 - 466920 - f 70 -5.9 -4.28774 | opp_overlap 466932, overlap 466923 CCATGTAATGTAAAA GAAGGGCTGACAGGG CTGA CTCAATCAGCCCTTT TTTTCATGGAGTTCC TERM 674 466950 - 466923 - f 79 -7.6 -4.25859 | opp_overlap 466932, overlap 466920 TGTAATGTAAAAGAA GGGCTGACAGGG CTGA CTCAATCAGCCC TTTTTTTCATGGAGT TERM 675 466932 - 466950 + F 100 -10.3 -5.52986 | opp_overlap 466923 466920 AAAGAAGGGCTGACA GGGCTGA CTCAA TCAGCCC TTTTTTTCATGGAGT TERM 676 467489 - 467470 - g 82 -7.8 -4.49556 | opp_overlap 467469 TGGGGATGAAACAAA GGCTTGGG ATTG CGCAAGCC ATATTACATCAGCCA ydbJ 467049 - 467975 + | ABC transporter ATP-binding protein BPUM_0423 467953 - 468720 + | ABC transporter ATP-binding protein TERM 677 469008 - 468993 - g 77 -6.2 -4.70515 | opp_overlap 468989 468992 468993, overlap 468989 TACACTTAAAAGAAA CATGAA ATGG TTCATG GTTTATTTATATGCG ydbL 468838 - 469173 + | hypothetical protein TERM 678 469217 - 469176 - T 100 -13.3 -4.29432 | opp_overlap 469181, overlap 469181 GAAATCTCATTAAAA CAAAAGCCGATAAAATCAA AGCA TAGATTTTATCGGCTTTTT TTGTTGGAAAAGACA TERM 679 469212 - 469181 - T 100 -13.2 -5.13722 | opp_overlap 469181, overlap 469176 CTCATTAAAACAAAA GCCGATAAAATCAA AGCA TAGATTTTATCGGC TTTTTTTGTTGGAAA TERM 680 469181 - 469212 + T 100 -13.2 -5.7946 | opp_overlap 469181 469176 CTCATTAAAACAAAA GCCGATAAAATCAA AGCA TAGATTTTATCGGC TTTTTTTGTTGGAAA TERM 681 469268 - 469236 - T 76 -5.6 -4.89567 | gap 1, opp_overlap 469238 469238, overlap 469238 TTGGAAAAGACAAAA GAGAGG-AGCAGCCA GCTT TGACTGCTACCCCTT ATGTTTATGATTCAC TERM 682 469265 - 469238 - T 79 -8.4 -4.05763 | opp_overlap 469238 469238, overlap 469236 GGAAAAGACAAAAGA GAGGAGCAGCCA GCTT TGACTGCTACCC CTTATGTTTATGATT ydbN 469422 - 469273 - | hypothetical protein TERM 683 469729 - 469754 + r 76 -10.5 -2.80939 | opp_overlap 469729, overlap 469728 469731 GAATAGAGAAAAAAA GACACCAGCAA ATGT TTGCTGATGTC CTTCGTTTTACGATT TERM 684 469754 - 469729 - R 100 -12.7 -5.80248 | opp_overlap 469729 469728 469731 GAATAGAGAAAAAAA GACACCAGCAA ATGT TTGCTGATGTC CTTCGTTTTACGATT ydbP 470089 - 469769 - | thioredoxin family protein ddl 470273 - 471355 + | D-alanyl-alanine synthetase A TERM 685 471369 - 471394 + F 78 -6.9 -4.41047 | opp_overlap 471368 471373, overlap 471371 AATGTGAGCAACGAG CAGACACTATC CTTA GGTAGTGTCTC TTTTCCTTCAAACGT TERM 686 471371 - 471392 + F 79 -9.5 -3.8125 | opp_overlap 471368 471373, overlap 471369 TGTGAGCAACGAGCA GACACTATC CTTA GGTAGTGTC TCTTTTCCTTCAAAC TERM 687 472731 - 472715 - g 78 -2.2 -5.5074 | overlap 472717 GAACTGAAGAAAAAA CTTGCT GACGT AGCAGG TCCTGATGATGTGGT murF 471437 - 472801 + | UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase BPUM_0429 472829 - 473521 + | carboxylesterase BPUM_0430 473649 - 473987 + | hypothetical protein TERM 688 474074 - 474095 + F 90 -9.5 -4.7871 | opp_overlap 474073 TTGTATATAATGGAC CTGTCCTTT CGAA AAAGGGCAG TTTTTAATGATCATT ydbR 474102 - 475643 + | ATP-dependent RNA helicase TERM 689 475651 - 475672 + F 100 -10.9 -5.41746 | opp_overlap 475651 ACAACTAATTCAAAA GCGAATCCT TTGC AGGGTTCGC TTTTTTTAACAGGTT TERM 690 475672 - 475651 - f 83 -8.7 -4.32804 | opp_overlap 475651 ACAACTAATTCAAAA GCGAATCCT TTGC AGGGTTCGC TTTTTTTAACAGGTT ydbS 475754 - 476233 + | hypothetical protein TERM 691 476341 - 476356 + G 71 -3.3 -4.95896 | overlap 476338 TTATTTTTGTGAACT CGAAT TCGAGC ATTCG TTTTTATGCATTTAT ydbT 476223 - 477722 + | hypothetical protein TERM 692 477766 - 477731 - T 79 -2 -5.63517 | gap 2, opp_overlap 477731 TTCTTAAACAAAAAA TGTCGATCCGCTTCCT GTTCAT AGGA-GTG-ATCGACA TTTTTTATGAGGTTA TERM 693 477731 - 477766 + T 79 -4.9 -5.27923 | gap 2, opp_overlap 477731 TTCTTAAACAAAAAA TGTCGATCCGCTTCCTG TTCA TAGGA-GT-GATCGACA TTTTTTATGAGGTTA ydcA 478384 - 477779 - | serine peptidase acpS 478479 - 478844 + | 4'-phosphopantetheinyl transferase TERM 694 479533 - 479516 - g 91 -5.5 -5.60993 | overlap 479519 CCTTTCATAAAAAAA CAATGGC GCCT GCCAGTG TGAAAGTGCTGGATA TERM 695 479530 - 479519 - g 78 -5.8 -4.89054 | overlap 479516 TTCATAAAAAAACAA TGGC GCCT GCCA GTGTGAAAGTGCTGG TERM 696 479834 - 479824 - g 88 -6.8 -5.10461 | CTCATTCAAGAAAAA GCGA GAG TCGC TGAAGCATCTACGCC ydcC 479014 - 480021 + | sporulation protein YdcC TERM 697 480083 - 480047 - f 79 -8.9 -3.88787 | gap 1, opp_overlap 480055, overlap 480048 480052 CGAGAGCCTTAGAAA TTGAAGGATCAGCCCT ATTGCA AGGGCTGATC-TTCAG CGTGTAGACAAACCT TERM 698 480082 - 480048 - f 87 -12.4 -2.92951 | gap 1, opp_overlap 480055, overlap 480047 480052 GAGAGCCTTAGAAAT TGAAGGATCAGCCCT ATTGCA AGGGCTGATC-TTCA GCGTGTAGACAAACC TERM 699 480079 - 480052 - f 78 -9.9 -3.32997 | opp_overlap 480055, overlap 480048 480047 GCCTTAGAAATTGAA GGATCAGCCCT ATTGCA AGGGCTGATCT TCAGCGTGTAGACAA TERM 700 480055 - 480076 + F 75 -10.2 -3.05343 | opp_overlap 480052 480048 480047 TTAGAAATTGAAGGA TCAGCCCT ATTGCA AGGGCTGA TCTTCAGCGTGTAGA TERM 701 480246 - 480208 - f 100 -20 -4.18506 | opp_overlap 480214, overlap 480214 TCACGCTGAAAAGAA GACAAAGTGCTAAAATAA AGA TCATTTTAGCACTTTGTC AACAATCTGAGATCA TERM 702 480240 - 480214 - f 100 -11.8 -4.45253 | opp_overlap 480214, overlap 480208 TGAAAAGAAGACAAA GTGCTAAAATAA AGA TCATTTTAGCAC TTTGTCAACAATCTG TERM 703 480214 - 480240 + F 81 -9.6 -3.87373 | opp_overlap 480208 480214 TGAAAAGAAGACAAA GTGCTAAAATAA AGA TCATTTTAGCAC TTTGTCAACAATCTG TERM 704 480257 - 480282 + F 100 -13.4 -5.48163 | opp_overlap 480253 480262 TTGTCAACAATCTGA GATCAGCCCT ATTGCA AGGGCTGATC TTTTTTGATTTGTTT alr 480363 - 481541 + | alanine racemase TERM 705 481558 - 481583 + F 100 -9.9 -5.4505 | gap 1, opp_overlap 481558 AAACAACATTCAAAA GAACGACAGTCA AAC TGACT-TCGTTC TTTTTTATTCGACAA TERM 706 481583 - 481558 - f 86 -9.9 -4.32951 | gap 1, opp_overlap 481558 AAACAACATTCAAAA GAACGACAGTCA AAC TGACT-TCGTTC TTTTTTATTCGACAA ydcD 481838 - 482119 + | hypothetical protein ydcE 482124 - 482474 + | PemK family growth inhibitor TERM 707 482489 - 482508 + F 100 -8.6 -5.80817 | ATATGGTGAGATATG GTTGCTCT ACTG GGAGCAAC TTTTTTTGTGTTCAA TERM 708 483369 - 483347 - g 70 -5.6 -4.32177 | TCAGGTTACAACAAA GAATACCCTT CAA AAAGGAATTC AAACTGCTTTGGAAA rsbR 482589 - 483419 + | anti-anti-sigma-B regulator rsbS 483424 - 483792 + | RsbT antagonist rsbT 483795 - 484196 + | non-specific serine/threonine protein kinase TERM 709 484563 - 484535 - g 84 -9.7 -3.75461 | opp_overlap 484534, overlap 484536 CAAATGTTCAGCAAA CCCTTCTGGAA ACGAAAA TTCCAGAAGGA GATACGTTCGATATT TERM 710 484562 - 484536 - g 77 -11 -2.84795 | opp_overlap 484534, overlap 484535 AAATGTTCAGCAAAC CCTTCTGGAA ACGAAAA TTCCAGAAGG AGATACGTTCGATAT TERM 711 484867 - 484890 + G 71 -2.4 -5.09762 | gap 1, overlap 484870 CATGAATTTAAATAT GCATCGGCT GGTCATG AGCCGG-GC TTTTTCTATTGCAAT rsbU 484207 - 485214 + | phosphoserine phosphatase rsbV 485274 - 485603 + | anti-anti-sigma factor (RsbW antagonist) rsbW 485600 - 486088 + | serine-protein kinase RsbW TERM 712 486372 - 486358 - gf 84 -8.6 -4.4009 | TTTTACGGGATAAAA CATGGA GTG TCCATG TACCAAGGCGAATCA sigB 486054 - 486842 + | RNA polymerase sigma factor SigB rsbX 486842 - 487441 + | phosphoserine phosphatase TERM 713 487427 - 487452 + F 89 -6.2 -5.63645 | CTCACCTATGTACTT GGTCAGCT TACGTAAAAT AGCTGACC TTTTTTCTGTTTTAC TERM 714 488459 - 488445 - g 78 -5.6 -4.77719 | overlap 488447 GAAAACTTAAGAAAA CTGCTG CTT CAGCCG CCGATGAAAGGGAAG ydcI 487518 - 489677 + | RNA binding transcriptional accessory protein TERM 715 489717 - 489687 - T 100 -9.6 -6.08342 | opp_overlap 489690, overlap 489690 GAATAAACAAAAAAA CGAGGCGCACCTCA GGA TGGGGTGTGCCTTG ATGCGACTGAATGTT TERM 716 489690 - 489714 + T 95 -14.3 -3.15663 | opp_overlap 489687 489690 TAAACAAAAAAACGA GGCGCACCTCA GGA TGGGGTGTGCC TTGATGCGACTGAAT TERM 717 489714 - 489690 - T 80 -9.9 -3.64572 | opp_overlap 489690, overlap 489687 TAAACAAAAAAACGA GGCGCACCTCA GGA TGGGGTGTGCC TTGATGCGACTGAAT BPUM_0449 489832 - 489698 - | hypothetical protein TERM 718 489826 - 489838 + g 71 -9.1 -3.34227 | GATTTTTCAGCCAGT TGGGC ATC GCCCA TTCCTCCTTTGGTCG ydcK 489932 - 490405 + | hypothetical protein TERM 719 490409 - 490427 + F 100 -6.7 -5.93809 | opp_overlap 490409 GGTTCAGATTGATAA GCATTCC TTTAT GGGATGC TTTTTTTTGTGAGAA TERM 720 490457 - 490490 + F 89 -7.5 -5.14965 | opp_overlap 490467 AGAAGTAGACATATT GAGACAAATAGAGAT TCAA GTCTCATTTTGTCTC TTTTTTGATCGAAGT TERM 721 491393 - 491409 + G 73 -5.1 -4.60041 | opp_overlap 491391 491393 CGAACATCAAGAAGA GAGAGAT GCG ATCGCTC TTTTTAAAAATGAAT acoA 490599 - 491576 + | dihydrolipoyl dehydrogenase E1 alpha subunit TERM 722 492414 - 492397 - g 73 -2.7 -5.1471 | AGTAGAAAAAACAAA TCGAC TTGTCATT GTCGA TGAAGCAAATCCAAG acoB 491597 - 492634 + | dihydrolipoyl dehydrogenase E1 beta subunit TERM 723 492961 - 492943 - g 73 -3.8 -5.04377 | CCAAAACAAAAGAAA GAGAGAAT TAA AATCTCCC CTGTTGCACGTAAGA acoC 492652 - 493791 + | branched-chain alpha-keto acid dehydrogenase subunit E2 TERM 724 494224 - 494246 + G 70 -7.6 -3.71649 | opp_overlap 494211 AAGCAAATCATTATT GCAACAGGGG CTG CGCCTGCTGC TTTACCGTTTGCACC acoL 493810 - 495189 + | dihydrolipoamide dehydrogenase TERM 725 496016 - 496002 - g 82 -2.1 -5.63103 | opp_overlap 496012 CTGTAATGAAAAAAA GCAAA TTGTT TCTGC CAGCAGGTCGATTAG acoR 495298 - 497145 + | transcriptional regulator TERM 726 498034 - 498070 + G 100 -12.5 -3.72315 | opp_overlap 498042, overlap 498042 TCCTCTCGGCCGCAT CTAAGAAACCAAAGGTT GTA GACCTTTGGTTTTTTTG TGTTTTCAATGTAAT TERM 727 498042 - 498062 + G 100 -10.5 -5.9362 | opp_overlap 498042, overlap 498034 GCCGCATCTAAGAAA CCAAAGGTT GTA GACCTTTGG TTTTTTTGTGTTTTC TERM 728 498062 - 498042 - g 88 -9.8 -4.20516 | opp_overlap 498034 498042 GCCGCATCTAAGAAA CCAAAGGT TGTAG ACCTTTGG TTTTTTTGTGTTTTC BPUM_0456 498006 - 498167 + | hypothetical protein BPUM_0457 498191 - 498985 + | alpha/beta fold family hydrolase grpB 499198 - 499704 + | glutamate rich protein cspC 499990 - 500193 + | cold-shock protein TERM 729 500211 - 500232 + T 100 -10.9 -5.75599 | opp_overlap 500211 TTCATTCTATCAAAA CAGGTTCTC TGTA GAGAGCCTG TTTTTTTGTGCTTTC TERM 730 500232 - 500211 - T 83 -8.7 -4.26903 | opp_overlap 500211 TTCATTCTATCAAAA CAGGTTCTC TGTA GAGAGCCTG TTTTTTTGTGCTTTC TERM 731 500292 - 500270 - T 85 -6.3 -5.4505 | TTCTGCAATAAAAAA CCCTACTCA ACGTA CAAGTAGGG AGATGTTACAAGGTA ydeB 500945 - 500484 - | transcription regulator CarD TERM 732 501148 - 501167 + r 78 -9.3 -3.57462 | opp_overlap 501148 CCACCATTAAAAAAA GACCAGC CATTGA GCTGGTC TTTCCAAATAGAATC TERM 733 501167 - 501148 - R 100 -10 -5.55664 | opp_overlap 501148 CCACCATTAAAAAAA GACCAGCC ATTG AGCTGGTC TTTCCAAATAGAATC adhA 502235 - 501186 - | NADP-dependent alcohol dehydrogenase yraB 502459 - 502860 + | MerR family transcriptional regulator TERM 734 502867 - 502894 + T 74 -10 -2.72879 | opp_overlap 502872, overlap 502872 TCCATTTGAATGAAG AAAAACCTGTGA TAAG TCACAGGTTTTC TGATGTGGTTATCTT TERM 735 502889 - 502872 - T 100 -9.9 -5.1963 | opp_overlap 502872 502867 TTGAATGAAGAAAAA CCTGTGA TAAG TCACAGG TTTTCTGATGTGGTT TERM 736 502872 - 502889 + T 89 -9.9 -4.5265 | opp_overlap 502872, overlap 502867 TTGAATGAAGAAAAA CCTGTGA TAAG TCACAGG TTTTCTGATGTGGTT bglS 503634 - 502903 - | licheninase TERM 737 503967 - 503983 + G 73 -5.9 -4.42464 | ATTGGGAAGGAAATT GAAGAAG TCG CTTTTTC TTTGTTTCAGGAATT TERM 738 504501 - 504489 - g 80 -6.3 -4.82901 | opp_overlap 504489 TTCGCTGCAGAAAAA CAGAT TTT ATCTG TTTTCAATAGACATT BPUM_0464 503940 - 504518 + | TetR family transcriptional regulator lmrB 504591 - 506030 + | major facilitator transporter TERM 739 506044 - 506067 + F 100 -3.8 -6.02919 | opp_overlap 506044 AAAATAGATGAAAAG CACTGAGG ACTTAGCG CCGCAGTG TTTTTTTATTTGTCC TERM 740 506353 - 506337 - g 75 -5.9 -4.72029 | CCGAAGTGAACAAAA TGGAATA TGA CATTCCA ACAAGTGCTGGCGAA TERM 741 506721 - 506708 - g 74 -4.5 -4.77986 | TTAAATATTCAAAAA GGGAA TCCA CTCCC GATTGTCTATCAAGT BPUM_0466 506225 - 507118 + | carboxylesterase A TERM 742 507163 - 507140 - f 100 -11.8 -5.30686 | gap 1, opp_overlap 507140 AACATGGAGAAAAAA GCACAGAACCC AGC GGGT-CTGTGC TTTATTGTTGTGAAG TERM 743 507140 - 507163 + F 100 -11.8 -4.51812 | gap 1, opp_overlap 507140 AACATGGAGAAAAAA GCACAGAACCC AGC GGGT-CTGTGC TTTATTGTTGTGAAG BPUM_0467 507260 - 507625 + | hypothetical protein dltE 507730 - 508491 + | short-chain dehydrogenase/reductase SDR TERM 744 508502 - 508527 + T 100 -11.2 -5.626 | opp_overlap 508502 AATAGACATGACACA TCACTGAGGG AAGATG CCCTCGGTGA TTTTTTTATGGCATG TERM 745 508618 - 508660 + T 81 -9.4 -4.00042 | opp_overlap 508621 508622 508631, overlap 508622 508631 AACTAAAATGGATAC CAATTGAAAAAAACACCT TCACGTT AGGTGTTTTTTTCATATG TTCTTTGATAAAGCA TERM 746 508657 - 508621 - T 78 -9.7 -3.32268 | opp_overlap 508618 508622 508631, overlap 508622 508631 TAAAATGGATACCAA TTGAAAAAAACACCT TCACGTT AGGTGTTTTTTTCAT ATGTTCTTTGATAAA TERM 747 508656 - 508622 - T 91 -13.2 -2.58638 | opp_overlap 508618 508622 508631, overlap 508621 508631 AAAATGGATACCAAT TGAAAAAAACACCT TCACGTT AGGTGTTTTTTTCA TATGTTCTTTGATAA TERM 748 508622 - 508656 + T 100 -13.2 -3.36839 | opp_overlap 508622 508621 508631, overlap 508618 508631 AAAATGGATACCAAT TGAAAAAAACACCT TCACGTT AGGTGTTTTTTTCA TATGTTCTTTGATAA TERM 749 508647 - 508631 - T 83 -3.7 -5.54192 | opp_overlap 508622 508618 508631, overlap 508622 508621 ACCAATTGAAAAAAA CACCT TCACGTT AGGTG TTTTTTTCATATGTT TERM 750 508631 - 508647 + T 83 -3.7 -5.62219 | opp_overlap 508631 508622 508621, overlap 508622 508618 ACCAATTGAAAAAAA CACCT TCACGTT AGGTG TTTTTTTCATATGTT BPUM_0469 509009 - 508641 - | hypothetical protein yccC 509287 - 510435 + | asparaginase TERM 751 510446 - 510463 + T 100 -11.3 -5.64274 | opp_overlap 510445 510444 510446 510448 ATTAATGAAGAAAGG GACCCGA AGCT TCGGGTC TTTTTTTATACGTGC TERM 752 510463 - 510446 - T 78 -11.3 -2.51348 | opp_overlap 510446, overlap 510445 510444 510448 ATTAATGAAGAAAGG GACCCGA AGCT TCGGGTC TTTTTTTATACGTGC BPUM_0471 511368 - 510469 - | peptidase BPUM_0472 511871 - 511425 - | MarR family transcriptional regulator TERM 753 511875 - 511902 + H 73 -7.1 -4.0616 | opp_overlap 511875 511877 TTCCTCATCCAATGA CATCACCTCTA TTTCAT TATAGGTGATG TTTATAGTTAAGGTA TERM 754 512031 - 512020 - gH 72 -2.2 -5.22768 | ATAATAAAAAATAAA CCAA CTGG TCGG TTTTTGTTTGTCCTG BPUM_0473 511957 - 512106 + | hypothetical protein BPUM_0474 512081 - 512686 + | TetR family transcriptional regulator TERM 755 513594 - 513604 + G 74 -4.6 -4.89521 | overlap 513592 513591 TGCTTGATCGTTGGA GCGG TGC TCGC TTTTGTTTCAACTGT blt 512718 - 513914 + | major facilitator transporter TERM 756 513944 - 513925 - T 84 -7.9 -4.82162 | opp_overlap 513927 513929 CATAATAATAGAAAA GAGACCT TGATAG AGGTCTC TTCAGCGTGTAGACA TERM 757 514112 - 514074 - T 100 -21.4 -3.66784 | opp_overlap 514080, overlap 514051 514080 TCACGCTGAATAGAA GACAAAGGGCTAAAATAA AGA TCATTTTAGCCCTTTGTC AACAACCTGAAGAGA TERM 758 514106 - 514080 - T 100 -13.2 -4.34444 | opp_overlap 514080, overlap 514074 TGAATAGAAGACAAA GGGCTAAAATAA AGA TCATTTTAGCCC TTTGTCAACAACCTG TERM 759 514080 - 514106 + T 84 -11 -3.86015 | opp_overlap 514080 514074 TGAATAGAAGACAAA GGGCTAAAATAA AGA TCATTTTAGCCC TTTGTCAACAACCTG TERM 760 514124 - 514143 + T 100 -8.6 -5.64274 | opp_overlap 514126 TGTCAACAACCTGAA GAGACCTT GATA GAGGTCTC TTTTTTTATGACTGC BPUM_0476 514565 - 514149 - | hypothetical protein TERM 761 514235 - 514221 - G 85 -4.2 -5.45802 | opp_overlap 514200 TTTGTAAAACAAAAA GGCAAT GAT ATGGCC TGCTAGTGTCAGAAA BPUM_0477 515002 - 514562 - | hypothetical protein TERM 762 515103 - 515114 + H 90 -4.4 -5.76633 | GTTGCAAAGAGTCAC TGCA TACG TGCA TTTTTTTATATATAA TERM 763 515870 - 515844 - g 100 -11.6 -5.07652 | opp_overlap 515864 GTCTTGAAAATAAAA GGACACCGCATT GGG ATTGCGATGTCC AACATCTAACTTCAA ydfB 515144 - 515950 + | hypothetical protein BPUM_0479 516415 - 515945 - | GNAT family acetyltransferase BPUM_0480 516468 - 516737 + | hypothetical protein TERM 764 516748 - 516723 - T 89 -7.5 -5.03145 | overlap 516741 CAATTTTTTAAAAAA GATGTCCCTTC TTAA GCAGGGGCATC TCCACTATTTATCTG BPUM_0481 517273 - 516734 - | acetyltransferase BPUM_0482 517665 - 517270 - | dioxygenase BPUM_0483 518357 - 517734 - | histone acetyltransferase HPA2-like protein TERM 765 518309 - 518324 + g 71 -9 -3.26545 | opp_overlap 518308 518306 AATCTTCTAACAGAT CTGCCA CTTG TGGCAG TTCGTCCTCTCTAGC BPUM_0484 518507 - 519058 + | transcriptional regulator BPUM_0485 519148 - 519690 + | dihydrofolate reductase family protein TERM 766 519689 - 519702 + F 100 -6.7 -5.93809 | AACAGGAGGATCACT GACCA GAGG TGGTC TTTTTTTTATGAAAC TERM 767 519754 - 519737 - f 72 -4.9 -4.77165 | opp_overlap 519747 519748 TCGTTGACAATAAAA TACCCTA GTGT TAGGATA AATTTATCCTAGTTT TERM 768 519747 - 519766 + F 70 -5.8 -4.27796 | opp_overlap 519737 519761, overlap 519748 519761 TAAAATACCCTAGTG TTAGGATA AATT TATCCTAG TTTTAGGATTTCTTG TERM 769 519907 - 519928 + GF 70 -8.1 -3.23235 | GAACGTTATGATATC GGATTTGAA AACT TTCAGATCC TTGAATTGCTCTATA BPUM_0486 519799 - 520272 + | transcriptional regulator BPUM_0487 520223 - 520879 + | nitroreductase family protein TERM 770 521436 - 521409 - g 71 -9.2 -3.03007 | overlap 521396 AAGACCTGTTCAAGA TCCACTTCCAAT TTGG ATCGGCAGTGGA GGAAACCGTGAATCT BPUM_0488 520897 - 521949 + | hypothetical protein TERM 771 521957 - 521986 + T 100 -13 -4.81083 | opp_overlap 521957 AAGCATAACGAAAAA GGTCGATCAAGT GAATAG GCTTGATCGACC TTTTTGATGCTTAAG TERM 772 521986 - 521957 - T 100 -12.3 -4.95876 | opp_overlap 521957 AAGCATAACGAAAAA GGTCGATCAAG TGAATAGG CTTGATCGACC TTTTTGATGCTTAAG BPUM_0489 522203 - 521997 - | hypothetical protein BPUM_0490 522253 - 522591 + | hypothetical protein TERM 773 522633 - 522598 - T 79 -10.6 -3.33298 | opp_overlap 522603, overlap 522603 TTTAATTAAATAAAG GAAAAGCTGACAGG TGGACAAG CCTGTCAGCTTTTT TATTGCGGATAATAA TERM 774 522628 - 522603 - T 91 -10.5 -4.72863 | opp_overlap 522603, overlap 522598 TTAAATAAAGGAAAA GCTGACAGG TGGACAAG CCTGTCAGC TTTTTTATTGCGGAT TERM 775 522603 - 522628 + T 100 -11.2 -5.45652 | opp_overlap 522603 522598 TTAAATAAAGGAAAA GCTGACAGGT GGACAA GCCTGTCAGC TTTTTTATTGCGGAT BPUM_0491 523187 - 522633 - | transcriptional regulator TERM 776 523766 - 523780 + G 72 -7.1 -4.05322 | CGGTACATTCAGCTG GAGCC TATTT GGCTC TTTGTATAAGCGTTT BPUM_0492 523299 - 523886 + | homoserine/threonine resistance transporter BPUM_0493 524442 - 523891 - | acetyltransferase BPUM_0494 525554 - 524565 - | LysR family transcriptional regulator TERM 777 526182 - 526214 + G 72 -9.8 -2.81966 | opp_overlap 526181 526179 AAAGTGATGTAATAC CGACCTGCCAGCGT GAAGG ACTTGGGCAGGTCG TATGGTCGCCTTTGG BPUM_0495 525608 - 526396 + | aldo/keto dehydrogenase TERM 778 526444 - 526463 + F 93 -10 -4.93661 | ATCATTATTTTTTAA TCCAGCCG ACCT TGGCTGGA TTTTCTTGTTGCTGT TERM 779 526733 - 526715 - g 90 -6 -5.47159 | CTTCAAGATAAAAAA GGAGATTT GAA AAATCACC TGAACGAGTAAATTC BPUM_0496 526559 - 526744 + | hypothetical protein BPUM_0497 526893 - 527555 + | O-methyltransferase TERM 780 527562 - 527583 + T 91 -8.8 -4.98531 | opp_overlap 527562 GTCAAATGAAAAAAA GCTTAACC ACATGC GGTTAAGC TTTTTCATTTAGAAA TERM 781 527583 - 527562 - T 100 -9.5 -5.72207 | opp_overlap 527562 GTCAAATGAAAAAAA GCTTAACCA CATG CGGTTAAGC TTTTTCATTTAGAAA BPUM_0498 527912 - 527592 - | hypothetical protein azlC 528634 - 527909 - | LIV-E family branched chain amino acid exporter TERM 782 528592 - 528613 + g 70 -5.2 -4.47551 | CCTCGAGAAATGGTT CATGTTCC GTGCGG GGAATATG TTTTCTAGCTTCAAT BPUM_0500 528929 - 529804 + | DMT family permease TERM 783 529836 - 529807 - T 93 -10.8 -4.89562 | opp_overlap 529810 TCAAAAGGAATAAAA GAAGATGTCCCT TTTAAT AGGGGCATCTTC TCAGCTTGTAGACAA TERM 784 529810 - 529833 + T 74 -8.9 -3.38291 | opp_overlap 529807 AAAGGAATAAAAGAA GATGTCCCT TTTAAT AGGGGCATC TTCTCAGCTTGTAGA TERM 785 530003 - 529965 - T 100 -19.2 -4.18506 | opp_overlap 529971, overlap 529971 TCACGCTGAAAAGAA GACAAAGGGCTAAAATCA AGA TCATTTTAGCCCTTTGTC AACAATCTGAAAGGA TERM 786 529971 - 529997 + T 86 -11 -3.87373 | opp_overlap 529965 529971 TGAAAAGAAGACAAA GGGCTAAAATCA AGA TCATTTTAGCCC TTTGTCAACAATCTG TERM 787 529997 - 529971 - T 90 -11 -4.45253 | opp_overlap 529971, overlap 529965 TGAAAAGAAGACAAA GGGCTAAAATCA AGA TCATTTTAGCCC TTTGTCAACAATCTG TERM 788 530016 - 530036 + T 89 -11.9 -3.27994 | opp_overlap 530016, overlap 530021 GTCAACAATCTGAAA GGAAAGGGG GAA TCCCTTTCC TTCATATAACATTAC TERM 789 530036 - 530016 - T 84 -11.2 -3.72051 | opp_overlap 530016 530021 GTCAACAATCTGAAA GGAAAGGG GGAAT CCCTTTCC TTCATATAACATTAC BPUM_0501 531298 - 530048 - | DAACS family dicarboxylate/amino acid:cation symporter BPUM_0502 531363 - 531533 + | hypothetical protein TERM 790 531922 - 531903 - T 85 -5 -5.60993 | overlap 531904 GTTTTTATAAAAAAA TCCTATGA TGTT TCATAGGT AGTCAGTCAAACGCT TERM 791 531921 - 531904 - T 77 -8.5 -3.95873 | overlap 531903 TTTTTATAAAAAAAT CCTATGA TGTT TCATAGG TAGTCAGTCAAACGC TERM 792 532100 - 532087 - T 73 -8.1 -3.68988 | GTCGAGCGAACAGAA GGGAG CTTG CTCCC GGATGTTAGCGGCGG TERM 793 532176 - 532161 - T 79 -10.4 -3.33315 | opp_overlap 532151, overlap 532171 GTAAGACTGGGATAA CTCCGG GAAA CCGGAG CTAATACCGGATAGT TERM 794 532494 - 532473 - T 81 -9.5 -3.97307 | gap 1 GTTAGGGAAGAACAA GTGCGAG-AG TAA CTGCTCGCAC CTTGACGGTACCTAA TERM 795 532646 - 532628 - T 74 -10.2 -2.75963 | overlap 532627 AGTCTGATGTGAAAG CCCCCGGC TCA ACCGGGGA GGGTCATTGGAAACT TERM 796 533650 - 533634 - T 70 -8.1 -3.25481 | overlap 533632 AAAGATCCTACAACA TCATATC TTC GATATGA AAGATGGGCCTGTAG TERM 797 534215 - 534196 - T 90 -12.2 -3.66803 | opp_overlap 534195 534194 CGGGAACAGCCCAAA CCAAGAGG CTTG CCTCTTGG GGTTGTAGGACACTC TERM 798 535753 - 535740 - T 71 -4.5 -4.7254 | ACTGTTTAGCAAAAA CACAG GTCT CTGCG AAGCCGTAAGGCGAA TERM 799 537038 - 537061 + T 100 -11.8 -6.07374 | opp_overlap 537038 537037 537040 CCAAGCTTCTATAAG GATCAGTTCC ATTT GGAACTGGTC TTTTTTGTTTTTTCT TERM 800 537061 - 537038 - T 71 -9.6 -2.58579 | opp_overlap 537038, overlap 537037 537040 CCAAGCTTCTATAAG GATCAGTTCC ATTT GGAACTGGTC TTTTTTGTTTTTTCT yaaC 538008 - 537040 - | hypothetical protein TERM 801 539348 - 539327 - g 81 -7.4 -4.74103 | GCTGCAATGGAAAAA GGAAGTAA AGATCG TTACTTCC AAGAAGATAATAAAA TERM 802 539414 - 539432 + G 74 -10.4 -2.72991 | opp_overlap 539408 TACAAAGGACCAGTC GTTGATAC AGT GTATCAAC TAGTTGGCGGTATCC guaB 538130 - 539596 + | inositol-5-monophosphate dehydrogenase TERM 803 539621 - 539645 + F 100 -9.3 -6.15717 | opp_overlap 539610 539620, overlap 539623 ACAATCAAATTACAT TTGACAGGGTC TAT GACTCTGTCTA TTTTTTTTGTCTTTA TERM 804 539623 - 539643 + F 100 -11.9 -4.67703 | opp_overlap 539610 539620, overlap 539621 AATCAAATTACATTT GACAGGGTC TAT GACTCTGTC TATTTTTTTTGTCTT dacA 539757 - 541082 + | serine-type D-Ala-D-Ala carboxypeptidase TERM 805 541112 - 541090 - T 100 -9.2 -5.4505 | opp_overlap 541090 GGTTCTAATAAAAAA CTGCTCTC TATACAT GAGAGCAG TTTTTTATCGTTAAA TERM 806 541090 - 541112 + T 100 -9.2 -5.37345 | opp_overlap 541090 GGTTCTAATAAAAAA CTGCTCTC TATACAT GAGAGCAG TTTTTTATCGTTAAA BPUM_0506 542601 - 541123 - | GntR family transcriptional regulator yaaD 542847 - 543731 + | pyridoxine biosynthesis protein yaaE 543752 - 544342 + | glutamine amidotransferase subunit PdxT TERM 807 544558 - 544571 + F 71 -6.7 -4.18494 | opp_overlap 544558 544557 544553 544552 GAGGAAAGAGGAAAG CATGC TTCT GCATG TTTTCAATCAGGGTG TERM 808 544596 - 544627 + F 100 -14.5 -5.63236 | overlap 544593 544625 AGGGTGGCAACGCGA GAGCTCTCGTCCC TTTCAT GGGATGAGGGCTC TTTTTATTTTTCGAT serS 544662 - 545936 + | seryl-tRNA synthetase TERM 809 545956 - 545934 - f 85 -10.7 -4.05045 | opp_overlap 545934, overlap 545925 545922 545937 AAAGAAGTAATGAAA TAAGATGCC GCTAT GGCATCTTA TTTATTTTTACCAAA TERM 810 545934 - 545956 + F 100 -11.4 -4.85782 | opp_overlap 545934 545925 545922 545937 AAAGAAGTAATGAAA TAAGATGCCG CTA TGGCATCTTA TTTATTTTTACCAAA TERM 811 545953 - 545937 - f 75 -8 -4.12043 | opp_overlap 545934, overlap 545934 545925 545922 GAAGTAATGAAATAA GATGCC GCTAT GGCATC TTATTTATTTTTACC BPUM_0510 546039 - 546869 + | chemotaxis sensory transducer TERM 812 546894 - 546877 - T 70 -8.4 -3.29269 | opp_overlap 546877, overlap 546875 CAAAATAGATCAAGA GCAGCC GTCGAT GGCTGC TTTTTTATGGGTAGA TERM 813 546877 - 546894 + T 100 -9.1 -5.28176 | opp_overlap 546877 546875 CAAAATAGATCAAGA GCAGCCG TCGA TGGCTGC TTTTTTATGGGTAGA TERM 814 547172 - 547149 - T 100 -15.4 -3.60971 | opp_overlap 547149 ATTGGAATTGTCAAA CCGCTGCATT CGCG AATGCAGCGG TTTTTTTTATTTTGT TERM 815 547149 - 547172 + T 100 -15.4 -6.37666 | opp_overlap 547149 ATTGGAATTGTCAAA CCGCTGCATT CGCG AATGCAGCGG TTTTTTTTATTTTGT dck 547838 - 547179 - | deoxynucleoside kinase dgk 548458 - 547835 - | deoxyguanosine kinase yaaH 549839 - 548538 - | spore germination protein yaaI 550439 - 549885 - | cysteine hydrolase family protein TERM 816 550625 - 550643 + G 71 -8.2 -3.53012 | opp_overlap 550625 TTGTTGATGACCAAA TTGTGAGC CGC GCTCATAA TTTAAGGGAAACAGA yaaJ 550519 - 550995 + | nucleoside deaminase TERM 817 551357 - 551379 + F 100 -8.5 -5.54885 | opp_overlap 551357 CAATATTAAATGTAA CTCATCTAG TTAAT CTAGGTGAG TTTTTTGTTGCTGTT TERM 818 552066 - 552080 + G 70 -7.8 -3.63569 | ATATGCTCTCTATCG GGGCGT TTA ATGCCC TTCTTAAAACGTTAG dnaX 551666 - 553378 + | DNA polymerase III subunits gamma and tau yaaK 553384 - 553728 + | hypothetical protein TERM 819 553794 - 553829 + G 100 -4.1 -5.95946 | gap 3, opp_overlap 553802 553803 TAGCTTTATGAAATT GCCAGGAATCGGACCGAA AAC TGCGGTCCG-T-C-TGGC TTTTTTTGTTCTTAG TERM 820 553823 - 553803 - g 76 -11.1 -2.50307 | opp_overlap 553794, overlap 553802 GAAATTGCCAGGAAT CGGACCGAA AAC TGCGGTCCG TCTGGCTTTTTTTGT recR 553744 - 554340 + | recombination protein RecR yaaL 554359 - 554583 + | hypothetical protein bofA 554650 - 554913 + | sigma-K factor-processing regulatory protein BofA TERM 821 555145 - 555126 - f 79 -5 -5.24531 | overlap 555127 AGTTTTTATAAAAAA TCCTATGA TGTT TCATAGGT AGTCAGTCAAACGCT TERM 822 555144 - 555127 - f 75 -8.5 -3.73995 | overlap 555126 GTTTTTATAAAAAAT CCTATGA TGTT TCATAGG TAGTCAGTCAAACGC TERM 823 555323 - 555310 - f 73 -8.1 -3.68988 | GTCGAGCGAACAGAA GGGAG CTTG CTCCC GGATGTTAGCGGCGG TERM 824 555399 - 555384 - f 79 -10.4 -3.33315 | opp_overlap 555374, overlap 555394 GTAAGACTGGGATAA CTCCGG GAAA CCGGAG CTAATACCGGATAGT TERM 825 555717 - 555696 - f 81 -9.5 -3.97307 | gap 1 GTTAGGGAAGAACAA GTGCGAG-AG TAA CTGCTCGCAC CTTGACGGTACCTAA TERM 826 555869 - 555851 - f 74 -10.2 -2.75963 | overlap 555850 AGTCTGATGTGAAAG CCCCCGGC TCA ACCGGGGA GGGTCATTGGAAACT TERM 827 557260 - 557241 - f 90 -12.2 -3.66803 | opp_overlap 557240 557239 CGGGAACAGCCCAAA CCAAGAGG CTTG CCTCTTGG GGTTGTAGGACACTC TERM 828 558798 - 558785 - f 71 -4.5 -4.7254 | ACTGTTTAGCAAAAA CACAG GTCT CTGCG AAGCCGTAAGGCGAA TERM 829 560394 - 560415 + F 86 -8.7 -4.64952 | opp_overlap 560394 GATCACTTCAACCCA GCCTGGTTT TTTC ATACCAGGC TTTCTTTATATCATT TERM 830 560623 - 560650 + G 76 -7.8 -4.23674 | gap 1, opp_overlap 560626, overlap 560626 GATGCAAGTGTTTAT CAACCTCATTCAC ATT GTGAA-GAGGTCG TTTGTGTTGATACAA TERM 831 561069 - 561084 + G 87 -4.6 -5.45652 | ATTAGACTCTCCCAA GGCAGT CGAC ACAGCC TTTTTTCTTGAGCGT thiL 560530 - 561507 + | thiamine monophosphate kinase ydiB 561530 - 561997 + | ATP-binding protein TERM 832 562451 - 562436 - g 100 -9 -4.63527 | opp_overlap 562436 562435 562433 562438, overlap 562445 562446 TCATGAGCTGAAAAA GACAGG AAAG CCTGTC CTATTTCTTGGACAG ydiC 561978 - 562667 + | M22 family peptidase TERM 833 562982 - 562968 - g 93 -2.8 -5.95539 | opp_overlap 562968 TTGTAAAGAAAAAAA GACAGA TCA TCTTTC TTTAGAGGTGCGGGT rimI 562651 - 563121 + | ribosomal-protein-alanine N-acetyltransferase gcp 563114 - 564142 + | O-sialoglycoprotein endopeptidase TERM 834 564148 - 564163 + T 100 -9 -5.85011 | opp_overlap 564147 564148 ATATGAATGAAAACG CCTGTG GATA CACAGG TTTTTTTCATTTTTA TERM 835 564412 - 564393 - T 100 -9.2 -5.40004 | CACTAAAGGAAAAAA GAGCACCC ATTA GGGCGCCC ATTAAGATTCGGATA ydiF 566336 - 564414 - | ABC transporter ATP-binding protein moaC 566476 - 566967 + | molybdenum cofactor biosynthesis protein C rex 566983 - 567636 + | redox-sensing transcriptional repressor Rex tatAY 567664 - 567843 + | TAT family twin arginine targeting transporter tatCY 567850 - 568614 + | TAT family twin arginine targeting transporter TERM 836 568619 - 568646 + T 100 -14.3 -5.63645 | opp_overlap 568603 568619 ATGTCTCATAAAAAA CATCGTGATCC AAATAA GGATCACGATG TTTTTTCTATTTTGA TERM 837 568646 - 568619 - T 100 -14.3 -5.24531 | opp_overlap 568619, overlap 568603 ATGTCTCATAAAAAA CATCGTGATCC AAATAA GGATCACGATG TTTTTTCTATTTTGA BPUM_0531 569279 - 568653 - | hydrolase TERM 838 569327 - 569304 - R 100 -8.2 -5.60993 | opp_overlap 569304 TCCCCCATAAAAAAA CCATTTCCCA CGTA CGGAAAATGG TTTTTGATTTATTTT TERM 839 569304 - 569327 + r 78 -5.3 -5.1517 | opp_overlap 569304 TCCCCCATAAAAAAA CCATTTCCC ACGTAC GGAAAATGG TTTTTGATTTATTTT ydiK 569530 - 569336 - | hypothetical protein ydiL 570261 - 569527 - | hypothetical protein TERM 840 570035 - 570054 + g 73 -7.2 -4.08767 | overlap 570017 570025 CCGACTGAAGCCGGT GCTTCATT TCGA AGTGAAGC TTTTGGCACAGTCCG groES 570492 - 570776 + | co-chaperonin GroES TERM 841 570934 - 570913 - g 71 -6.7 -4.10657 | gap 1, overlap 570917 GCAGATGCTGTAAAA GTCACTTTAG GAC CTAAAG-GAC GTAACGTAGTTCTAG TERM 842 571937 - 571918 - g 79 -3 -5.38054 | gap 1, overlap 571921 TTCGATAAAGAAAAA TTA-CAAGA ACG TCTTGCTAA ACTAGCTGGTGGCGT TERM 843 572013 - 571996 - g 71 -4.9 -4.58724 | gap 1, overlap 571998 572008 GAAACAGAACTAAAA GA-GCGTA AAC TACGCATC GAGGATGCACTCAAC TERM 844 572010 - 571998 - g 72 -7.7 -3.87807 | overlap 571996 572008 AACAGAACTAAAAGA GCGTA AAC TACGC ATCGAGGATGCACTC groEL 570832 - 572466 + | chaperonin GroEL TERM 845 572474 - 572503 + T 88 -8.7 -4.76274 | opp_overlap 572480 TGATGTAAACACCCG CAAAAACCCCT TGAAATAT GGGGGTTTTTG TTTTGTCTTCATTTA TERM 846 572742 - 572766 + T 91 -8.6 -5.17744 | opp_overlap 572736 572742, overlap 572744 AAAGAAAGAGTGAAA TTCCACTTCC GAATA GGGAGTGGGA TTTTTATTGCTATGT TERM 847 573468 - 573426 - T 95 -14.5 -2.91276 | opp_overlap 573430 573435, overlap 573435 TTTGTTTGTATAAAC TTGAAAAAAGCTTGTAGAG CGATC CTCTACAAGCTTTTCTAAA TTATTGGGCTCTTTC TERM 848 573430 - 573464 + T 91 -13.1 -2.66106 | opp_overlap 573426 573435, overlap 573435 TTTGTATAAACTTGA AAAAAGCTTGTAGAG CGATC CTCTACAAGCTTTTC TAAATTATTGGGCTC TERM 849 573435 - 573459 + T 100 -13 -4.50943 | opp_overlap 573426 573435, overlap 573430 ATAAACTTGAAAAAA GCTTGTAGAG CGATC CTCTACAAGC TTTTCTAAATTATTG TERM 850 573459 - 573435 - T 100 -13 -5.1361 | opp_overlap 573435 573430, overlap 573426 ATAAACTTGAAAAAA GCTTGTAGAG CGATC CTCTACAAGC TTTTCTAAATTATTG BPUM_0537 573936 - 573469 - | hypothetical protein TERM 851 573526 - 573538 + g 71 -3.3 -5.00196 | TTTTGTTCCCTTTGC CAGCA CTT TGCCG TTTTCTTGTTTCACG TERM 852 574058 - 574030 - R 73 -8.2 -3.63837 | opp_overlap 574036, overlap 574036 ATAAGCTGTGAACAA TAAAAAGCACCC AAAAA GGGCGCTTTTTT TCTTATTGTGCTGAC TERM 853 574052 - 574036 - R 91 -7.2 -5.29445 | opp_overlap 574036, overlap 574030 TGTGAACAATAAAAA GCACCC AAAAA GGGCGC TTTTTTTCTTATTGT TERM 854 574036 - 574052 + r 100 -5 -5.97979 | opp_overlap 574036 574030 TGTGAACAATAAAAA GCACCC AAAAA GGGCGC TTTTTTTCTTATTGT BPUM_0538 574735 - 574061 - | hypothetical protein ydjM 574946 - 575314 + | hypothetical protein TERM 855 575326 - 575364 + F 70 -8.3 -3.29263 | opp_overlap 575331, overlap 575331 TTAATACATAGGCAT GCAAAGAAGCGGGAAAA GTTCA TTTTCTGGCTTCTTTTC TTGTAGAGAGGGTCT TERM 856 575331 - 575359 + F 79 -6.8 -4.77165 | opp_overlap 575331, overlap 575326 ACATAGGCATGCAAA GAAGCGGGAAAA GTTCA TTTTCTGGCTTC TTTTCTTGTAGAGAG ydjN 575388 - 576437 + | hypothetical protein TERM 857 576444 - 576469 + T 100 -11.3 -6.09196 | opp_overlap 576441 576444 AATCGATAAAAGGTA CGTTCAGTTAT TGAT ATAACTGGACG TTTTTTTATTTTACC BPUM_0541 577027 - 576653 - | 4-carboxymuconolactone decarboxylase cotA 578844 - 577315 - | outer spore coat protein A TERM 858 578203 - 578242 + g 77 -10.8 -2.74192 | TAGATCACTGTCTTC TGGCGTGTTGTTTGGTCT GCTT GGATAAAACAGCGCGCCA TCCTCTTGAAACGTA TERM 859 578783 - 578829 + g 70 -2.5 -4.92314 | overlap 578783 GTTTGTCTTGGGTTC TTT-TTGACGGGCTCCGCAACTT CTG GAATTG-GCAGCTCGTCAACAAA TTTTTCTAGGTTCAT TERM 860 578939 - 578924 - R 100 -10.4 -6.17669 | AATAAAATAAAAAAA CCCGCT TTTC AGCGGG AGCATTATGGATGTT gabP 580350 - 578944 - | APC family amino acid-polyamine-organocation transporter TERM 861 580288 - 580300 + g 76 -2.7 -5.40072 | GATCATGGAAATATG TCTTG TTT TAAGA TTTTTTTGAAGACCG TERM 862 580351 - 580366 + H 79 -6.2 -4.87389 | opp_overlap 580351 580350 TTTACCTCCAAACAT TTCTCT TGAT AGAGAA TTTGTTTTTAGAATA yeaB 580815 - 581714 + | CDF family cation diffusion facilitator TERM 863 581696 - 581723 + F 91 -7.1 -5.30686 | opp_overlap 581696 GCCAAAAGAAGAGAA GAAGTCTTTTC CATCGT GAGAAGGCTTC TTTTTTCTACGTGTT yeaC 581816 - 582778 + | methanol dehydrogenase regulatory protein TERM 864 582765 - 582791 + F 79 -8.8 -4.02315 | opp_overlap 582764 TGCCAGTTCAAAAGT CGATGACTCAAT GAA ATTAGGTCATCG TTTCGCTTTTTCATT TERM 865 582998 - 582983 - g 75 -7.5 -4.32177 | GGACTTTACAACAAA CCCGC TTGAAG GCGGG AGACGTGCTGTCCGT TERM 866 583659 - 583669 + G 71 -3.2 -5.04249 | AGGAGAGTCTCATTT GCAG GAC TTGC TTTATTTTTTAACAA TERM 867 583697 - 583685 - g 70 -7.7 -3.62597 | opp_overlap 583685 TTTATTTTTTAACAA TGGTG CAG CACCA TCCTTCTCGCGCACT yeaD 582775 - 583965 + | hypothetical protein TERM 868 583993 - 584003 + G 82 -8.2 -4.36729 | CTTCATACGCATCAG CGGC AAA GCCG TTTTGAGTTGTTCAT yebA 583975 - 586179 + | hypothetical protein TERM 869 586294 - 586316 + F 91 -7 -5.38951 | AAGCGTGATTCACAT TGAGAGCAGG TTT TCTCCTCTCA TTTTTTCTGTGCGTT TERM 870 586355 - 586341 - f 76 -3.6 -5.24129 | TGCGTTTATAAAAAA CTATAT TGG ACATAG AGGTGACACCATGAC guaA 586366 - 587907 + | bifunctional GMP synthase/glutamine amidotransferase protein TERM 871 588023 - 588009 - f 81 -7 -4.72272 | GTTCCCCACCAAAAA CCCCAC CAA GGGGGG AGAAAAGCCAATTCC TERM 872 588056 - 588030 - f 86 -9.5 -4.386 | opp_overlap 588030 CAAGGGGGGAGAAAA GCCAATTCCTT TTTAT AAGGACTTGGC TTTTTTTGTGCTTAT TERM 873 588030 - 588056 + F 100 -9.5 -5.73339 | opp_overlap 588030 CAAGGGGGGAGAAAA GCCAATTCCTT TTTAT AAGGACTTGGC TTTTTTTGTGCTTAT yopK 588295 - 589413 + | spore transcriptional regulator YopK TERM 874 589580 - 589553 - T 89 -6.2 -5.55664 | opp_overlap 589550 589555, overlap 589555 GTATTATTAAAAAAA GAGACGTCGCCT TTTT AGGCAGCGTCTT TCGTTATTTTTACAG TERM 875 589578 - 589555 - T 84 -8.8 -4.41456 | opp_overlap 589555 589550, overlap 589553 ATTATTAAAAAAAGA GACGTCGCCT TTTT AGGCAGCGTC TTTCGTTATTTTTAC TERM 876 589555 - 589578 + T 83 -8.8 -4.25754 | opp_overlap 589553 589555, overlap 589550 ATTATTAAAAAAAGA GACGTCGCCT TTTT AGGCAGCGTC TTTCGTTATTTTTAC TERM 877 589728 - 589707 - T 100 -10.3 -5.39221 | opp_overlap 589706 589705 AGAAGAATTAAAAAA GTTACTTTC ACCT GAAAGTAAC AATTCTAAGAATCAA BPUM_0550 590119 - 589733 - | transcriptional regulator TERM 878 589891 - 589907 + g 75 -2.3 -5.30155 | CGAATATCAGTTCTT TTTCGGT CTC ATTGAAA TTTTTTAATTCATCA BPUM_0552 590560 - 590802 + | hypothetical protein TERM 879 591208 - 591184 - f 100 -5.8 -5.77988 | gap 1, opp_overlap 591200 ATATAGACAAAAAAA GCGC-CTTGAT ATTC ATCAAGAACGC CTTAGATAAAACCTA TERM 880 591472 - 591460 - f 79 -4.8 -5.25906 | ATAAATCAATAAAAA CGTG ATGAA CACG CATAAAAGGAGAACT TERM 881 591682 - 591700 + F 83 -8.2 -4.44245 | CAGTACCAGCAGCGG TCGAACTT AAA GAGTTCGA TTTTATGAGTGATGT TERM 882 591964 - 591987 + F 82 -8.2 -4.21438 | opp_overlap 591964 ATAAAGTGGTGAAGA CAGGTGCATT AATC AGTGTACCTG TTATTTATTGCCCTG BPUM_0553 592152 - 593117 + | hypothetical protein TERM 883 593215 - 593238 + G 100 -6 -5.84381 | ATAATCTAAGAATAA CAGGTGCATT AATA AGTGTGCCTG TTTTTTTGTTGCTCA ydcQ 593151 - 594485 + | FtsK/SpoIIIE family protein TERM 884 594604 - 594571 - g 70 -8.1 -3.59315 | opp_overlap 594578, overlap 594563 594577 CGAATGACGGGGAAA GTGAAACCCCCCCAC GCTA ACAGGGGGGTTCTAC GGAAAAAAGAAGAAG TERM 885 594598 - 594577 - g 72 -7.9 -3.84719 | opp_overlap 594578, overlap 594563 594571 ACGGGGAAAGTGAAA CCCCCCCAC GCTA ACAGGGGGG TTCTACGGAAAAAAG TERM 886 595009 - 594987 - g 72 -9.3 -3.12351 | opp_overlap 594986 594985 TTTTTCTATACCTAA CCTTTTGAA AAGAG TTCAAAAGG GGTTATGTGTTTCAA TERM 887 595436 - 595420 - g 88 -6.7 -5.16572 | overlap 595411 ATTGAACCTAAAAAA GATTTTT ATG AAAAATC ACGGAATTGGCTGCA TERM 888 595626 - 595616 - g 78 -4 -5.22794 | opp_overlap 595616, overlap 595617 ATAAGCATGAAAAAA TGTT AGA AACA TTCTTAACGCCAATT ydcR 594559 - 595659 + | transcriptional regulator TERM 889 595864 - 595883 + F 100 -8.6 -5.65927 | opp_overlap 595864 GGAAGAGTTCTTAAA GGATAGTC AAAA GACTGTCC TTTTTTGTTTGGATA BPUM_0556 595915 - 596172 + | hypothetical protein yddA 596179 - 596457 + | hypothetical protein BPUM_0558 596536 - 597186 + | hypothetical protein TERM 890 597194 - 597225 + F 70 -8.2 -3.29144 | opp_overlap 597189 597200, overlap 597188 597200 ATAAATAAATTTTCA TGGAAAGGTATCTT TTAT AAGATGCCTTTTTA TTATGAAAAAAGTGA TERM 891 597200 - 597219 + F 91 -7.2 -5.18726 | opp_overlap 597200, overlap 597194 AAATTTTCATGGAAA GGTATCTT TTAT AAGATGCC TTTTTATTATGAAAA TERM 892 598325 - 598307 - g 91 -4.6 -5.60993 | overlap 598315 TGCGCCAGAAAAAAA TCAACGTA CAG CACATTGA TAAATATTCTGGAGA TERM 893 598627 - 598609 - g 71 -4.6 -4.72333 | AAGTATACCGAAAAA CATCCT ACAATTA AGGATG GCGAATACACATACC BPUM_0559 597247 - 599790 + | hypothetical protein BPUM_0560 601003 - 600179 - | hypothetical protein ydiP 601232 - 602017 + | DNA (cytosine-5-)-methyltransferase TERM 894 602012 - 602031 + F 93 -5 -5.67283 | TCATCCATGATTAAA GGATAGTC AAAA GGCTATTC TTTTTTGTTTACCTT BPUM_0562 602089 - 602385 + | hypothetical protein BPUM_0563 602375 - 602656 + | hypothetical protein TERM 895 602884 - 602905 + G 75 -7.4 -4.25256 | opp_overlap 602881 AATTGTCACAGAGGG CTTTCGAA TTGAAT TTCGAAAG TTCTTTTAATGAGAA BPUM_0564 602685 - 603077 + | hypothetical protein TERM 896 603854 - 603866 + G 78 -9.1 -3.90744 | opp_overlap 603836 603853 603854 GGTTTAAGAAATAAC CCTGC TTG GCAGG TTGTTTCAGAGACAC BPUM_0565 603074 - 604303 + | type II/IV secretion system protein BPUM_0566 604290 - 605102 + | hypothetical protein BPUM_0567 605107 - 605868 + | hypothetical protein BPUM_0568 605875 - 606234 + | hypothetical protein BPUM_0569 606407 - 606574 + | hypothetical protein TERM 897 606587 - 606610 + F 85 -7.4 -5.03314 | TAACAAATGATGTAG GGGCAAGTCT TTCG GGGCTTGCTC TTTTTTGAAAGTGAG BPUM_0570 606833 - 607081 + | hypothetical protein yddB 607062 - 608057 + | hypothetical protein yddC 608069 - 608329 + | hypothetical protein TERM 898 608482 - 608532 + G 80 -6.2 -4.7871 | overlap 608494 GTCGCAATTAGTTTC GGTTTTTTCTTAGGTGTTAGGAAG ATA TTTCCTAGCGCCTTTGAAAATACA TTTTTAATCGTAATT TERM 899 608494 - 608520 + G 82 -10.2 -3.58536 | overlap 608482 TTCGGTTTTTTCTTA GGTGTTAGGAAG ATA TTTCCTAGCGCC TTTGAAAATACATTT yddD 608341 - 608808 + | hypothetical protein yddE 608786 - 611242 + | hypothetical protein TERM 900 611542 - 611526 - f 100 -12.3 -4.80736 | GAGGAAATAAAGAAA GACCCGA TAA TCGGGTC CATAAAACTTTTACA TERM 901 611627 - 611609 - f 81 -4.6 -5.49234 | opp_overlap 611591 611612 611622, overlap 611612 ACAGTGAATAAAAAA CAATCACT GTC AGTGATTC CATCATACTTACACA TERM 902 611624 - 611612 - f 77 -6.3 -4.81306 | opp_overlap 611591 611612 611622, overlap 611609 GTGAATAAAAAACAA TCACT GTC AGTGA TTCCATCATACTTAC TERM 903 611695 - 611726 + F 93 -11 -4.95547 | opp_overlap 611699 611701 TCGAGGGATTATTAG GGAATACATGCTAT GGCC GTAGCTTGTATTCC TTTTCTTATTGTACC TERM 904 611964 - 611983 + F 100 -6.4 -5.7946 | GAGATTTGAAAATTA GTCGTTCA TAAT TGAGCGGC TTTTTTTATTGGGAA TERM 905 612358 - 612321 - g 70 -5.6 -4.3255 | opp_overlap 612323, overlap 612324 TGCTGAACCAATAAA TAACTTTAGCGACGCT ATTACG AGCGTCTCTAAGGATA TGTACAATGTTTTAA TERM 906 612355 - 612324 - g 75 -7.3 -4.27694 | opp_overlap 612323, overlap 612321 TGAACCAATAAATAA CTTTAGCGACGCT ATTACG AGCGTCTCTAAGG ATATGTACAATGTTT TERM 907 612407 - 612429 + G 71 -2.1 -5.24129 | gap 1, overlap 612408 TAATTTTTGTATTTC T-GATAGGCT TCCT AGTCTATCTA TTTTTTATAAGAGGC TERM 908 612408 - 612427 + G 75 -7.2 -4.25873 | overlap 612407 AATTTTTGTATTTCT GATAGGCT TCCT AGTCTATC TATTTTTTATAAGAG TERM 909 612461 - 612477 + G 70 -2.9 -4.94972 | ATTTTAAGGAGGGTA TGAGGCG TTT CGCTTTG TTTTTCCTTGTCATG yddG 612013 - 614394 + | hypothetical protein TERM 910 615066 - 615076 + G 71 -4.6 -4.59414 | TGGGCTGGTTCAACT CCTG ATA CGGG TTTTGATTGTTCTGG yddH 614391 - 615368 + | C40 family peptidase yddI 615378 - 615869 + | hypothetical protein BPUM_0578 615897 - 616106 + | hypothetical protein TERM 911 616144 - 616154 + F 76 -4 -5.26316 | TGTTTACATTGATGA TAAC GGA GTTA TTTTTTATCAAATAG TERM 912 616466 - 616441 - g 84 -6.1 -4.95211 | opp_overlap 616444, overlap 616444 616456 AAAAAAGGAAGAAAA GATGCTAATGG AAAA CCCTTTGCATC AGCCTTTGAGGCTAA int 616312 - 617589 + | integrase TERM 913 617610 - 617596 - T 71 -4.3 -4.69559 | opp_overlap 617584, overlap 617584 617609 AAAGGTTAAAAGAAA CCTTT GTTTT AAAGG GGTTTGGAACACCTA TERM 914 617647 - 617697 + T 100 -13 -4.87893 | opp_overlap 617654, overlap 617654 TTGAGTGGGAGTAGT TATAAAAGAGATAGAAACCTTT GTGTATA AGGGGTTTCTATCTCTTTTTTA TTTTTAATTGCACTT TERM 915 617654 - 617690 + T 100 -11.1 -5.95286 | opp_overlap 617654, overlap 617647 GGAGTAGTTATAAAA GAGATAGAAACCTTT GTGTATA AGGGGTTTCTATCTC TTTTTTATTTTTAAT TERM 916 617690 - 617654 - T 75 -6.8 -4.43844 | opp_overlap 617654 617647 GGAGTAGTTATAAAA GAGATAGAAACC TTTGTGTATAAGG GGTTTCTATCTC TTTTTTATTTTTAAT BPUM_0581 618921 - 617863 - | AraC family transcription regulator TERM 917 618355 - 618378 + g 77 -6.2 -4.62984 | ATCCAAGTGACTATG GAAAATAAGA ATAT TTTTATTTTC TTTTATATATAATGC TERM 918 618460 - 618445 - G 73 -2.6 -5.09173 | opp_overlap 618447, overlap 618435 618447 TAACATTTTAAAAAA CACTTT TTGA AAAGTA CTTTTACGGATCATG BPUM_0582 620583 - 618922 - | 2-isopropylmalate synthase TERM 919 619873 - 619891 + g 71 -3.1 -5.07275 | opp_overlap 619867, overlap 619874 AACAGATAATGTCAC ACTGTCT CGGTA AGACAGA TTTTTGTGTATATAC TERM 920 620407 - 620421 + g 90 -7.2 -5.21236 | opp_overlap 620407 GATCTCTACTAGTAA TTGGAA CAT TTCCAA TTTTTCTTCTAAGTT TERM 921 620618 - 620655 + r 72 -7 -3.94877 | opp_overlap 620618 TGGAATATAAAAAAA GCCTATCATCTCCAAG ATTGAA CTTGGAGACGAAAGAC TTCTTCTTACGCGGT TERM 922 620655 - 620618 - R 100 -11.4 -5.80817 | opp_overlap 620618 TGGAATATAAAAAAA GCCTATCATCTCCAAG ATTGAA CTTGGAGACGAAAGAC TTCTTCTTACGCGGT ybfP 622034 - 621147 - | AraC family transcription regulator ydeE 622244 - 623116 + | transcriptional regulator BPUM_0585 623130 - 623705 + | acetyltransferase TERM 923 623803 - 623832 + T 79 -8.1 -4.11371 | gap 1, opp_overlap 623803 623812, overlap 623812 TTATAAAAGTACAAA CAAAAAAGAGTGAG CAT CTCGCT-TTTTTTG TTTTCCAACCTATTG TERM 924 623832 - 623803 - T 70 -5.9 -4.2408 | gap 1, opp_overlap 623803 623812, overlap 623812 TTATAAAAGTACAAA CAAAAAAGAGTGAG CAT CTCGCT-TTTTTTG TTTTCCAACCTATTG TERM 925 623812 - 623824 + T 100 -5.5 -6.09196 | opp_overlap 623812 623803, overlap 623803 TACAAACAAAAAAGA GTGAG CAT CTCGC TTTTTTTGTTTTCCA BPUM_0586 624408 - 623842 - | acetyltransferase TERM 926 624113 - 624123 + g 71 -4.6 -4.62471 | TAGCCAATTTCCGTG CGGC AGT GCTG TTTTTCCAAGTTAAG TERM 927 624154 - 624171 + g 79 -8.5 -4.08767 | AAATCCACAGCTGCC GATGATC GCAG GATCATC TTTTAAAGAAATGCC BPUM_0587 624598 - 624413 - | hypothetical protein TERM 928 624824 - 624814 - gH 88 -6.8 -5.14894 | AAAAAAGCACAAAAA GGGA ATG TCCC GGCATTTGAGAAATT BPUM_0588 624778 - 625323 + | ECF family DNA-directed RNA polymerase sigma factor TERM 929 626043 - 626058 + GT 76 -7.6 -4.08216 | CTGCTATTCAATATG CCATTG ATTA CAATGG TTTTGCCAAAGATGA BPUM_0589 625292 - 626740 + | hypothetical protein TERM 930 626776 - 626745 - T 70 -5.9 -4.22554 | opp_overlap 626749, overlap 626747 626749 CTAGTCAATAAATAA GAGAGCGAACATG ATTATA CATGTTCGCTTTT TGTCTGTTGTTCCAC TERM 931 626774 - 626747 - T 73 -8.5 -3.70444 | opp_overlap 626749, overlap 626745 626749 AGTCAATAAATAAGA GAGCGAACATG ATTATA CATGTTCGCTT TTTGTCTGTTGTTCC TERM 932 626749 - 626772 + T 93 -11.1 -5.1383 | opp_overlap 626747 626745 626749 TCAATAAATAAGAGA GCGAACATG ATTATA CATGTTCGC TTTTTGTCTGTTGTT TERM 933 626772 - 626749 - T 83 -11.1 -3.41979 | opp_overlap 626749, overlap 626747 626745 TCAATAAATAAGAGA GCGAACATG ATTATA CATGTTCGC TTTTTGTCTGTTGTT BPUM_0590 627946 - 626759 - | major facilitator transporter TERM 934 627817 - 627805 - G 75 -9.1 -3.71321 | AGTAAACGGTAATAA GCTGC CCG GCAGC AGGAATGGAGATGTT TERM 935 628462 - 628480 + G 70 -3.8 -4.77165 | overlap 628466 TGGAGTGGCTGGACT CTGGCATC ATT GATGTTGG TTTTGTTGTGAAAGG lysR 628047 - 628943 + | LysR family transcriptional regulator TERM 936 628989 - 629015 + F 75 -6.6 -4.49167 | opp_overlap 628989, overlap 628986 AATAAGACGAATGAA GCGGACGTTTCT TTG AAAAATGTTCGC TTTTCGTATTGTGTT TERM 937 629221 - 629241 + F 100 -9 -5.67283 | opp_overlap 629220 ACATATGTAGTCAAG CGTCCCAA AAGTG TTGGGGCG TTTTTTATTTGACTT pbuG 629305 - 630630 + | NCS2 family nucleobase:cation symporter-2 TERM 938 630633 - 630677 + F 100 -10.9 -5.42259 | opp_overlap 630642, overlap 630636 CTTAAATCATTAATT GTTGACAAAGGGTTAAAACGA TCT TTATTTTAACCCTTTGTCTTC TTTTTTTCAGCGTGA TERM 939 630636 - 630674 + F 100 -15.6 -4.79949 | opp_overlap 630642, overlap 630633 AAATCATTAATTGTT GACAAAGGGTTAAAACGA TCT TTATTTTAACCCTTTGTC TTCTTTTTTTCAGCG TERM 940 630668 - 630642 - f 72 -7.4 -3.87869 | opp_overlap 630636 630633 TTAATTGTTGACAAA GGGTTAAAACGA TCT TTATTTTAACCC TTTGTCTTCTTTTTT TERM 941 630808 - 630829 + F 100 -10.2 -6.09196 | opp_overlap 630808 GTCTACACGCTGAAA CAGCAGCT CATTGA AGCTGCTG TTTTTTTGTTTTGCC TERM 942 630829 - 630808 - f 83 -10.9 -3.59262 | opp_overlap 630808 GTCTACACGCTGAAA CAGCAGCTC ATTG AAGCTGCTG TTTTTTTGTTTTGCC TERM 943 630918 - 630901 - f 76 -9.9 -3.15544 | overlap 630911 GTCTATTCGTATGAA CGTCAAG GAAT CTTGACG GAACAGAGAGACTCC yebC 631012 - 631812 + | hypothetical protein TERM 944 631857 - 631819 - f 100 -15.7 -3.02471 | gap 1, opp_overlap 631822 631828, overlap 631821 631828 TTTGGATGATACACA CACTGAAAACCTCCTTTT TTGA AAAAGGAGGTTTTCA-TG TTGAGAAGAGGAAAA TERM 945 631856 - 631821 - f 100 -15 -3.0682 | opp_overlap 631822 631828, overlap 631819 631828 TGGATGATACACACA CTGAAAACCTCCTTTT TTGA AAAAGGAGGTTTTCAT GTTGAGAAGAGGAAA TERM 946 631822 - 631855 + F 100 -18.5 -3.01712 | opp_overlap 631821 631819 631828, overlap 631828 GGATGATACACACAC TGAAAACCTCCTTTT TTGA AAAAGGAGGTTTTCA TGTTGAGAAGAGGAA TERM 947 631849 - 631828 - f 93 -11.7 -4.27259 | opp_overlap 631822 631828, overlap 631821 631819 TACACACACTGAAAA CCTCCTTTT TTGA AAAAGGAGG TTTTCATGTTGAGAA TERM 948 631828 - 631849 + F 100 -11.7 -4.4261 | opp_overlap 631828 631821 631819, overlap 631822 TACACACACTGAAAA CCTCCTTTT TTGA AAAAGGAGG TTTTCATGTTGAGAA yebE 631947 - 632573 + | hypothetical protein yebG 632570 - 632770 + | hypothetical protein TERM 949 632988 - 633032 + F 100 -13.7 -5.08088 | AACAGCGCTTACCAT GGCCCGGTTTGTGTTGCTT CCTAACA ATGCAATGCAAATCGGGCC TTTTTGTTCGGCGTT TERM 950 633366 - 633356 - g 71 -4.6 -4.72272 | TGGTCGCAGCAAAAA CGAC ACT GCCG GTCATTGGTGTGCCC purE 633121 - 633609 + | phosphoribosylaminoimidazole carboxylase catalytic subunit TERM 951 634121 - 634097 - g 75 -2 -5.33405 | overlap 634100 634112 GTCATCAAAGAAAAA GGACAGCTTC AGGAA GCAGCTGCAC TGCTCACACATGGAA TERM 952 634157 - 634175 + G 73 -8.2 -3.69323 | ATTTTAGAAAGCTGG GTTCCATT TCA AATGGAGC TTTCGGTGATCGTCA purK 633602 - 634744 + | phosphoribosylaminoimidazole carboxylase ATPase subunit purB 634741 - 636036 + | adenylosuccinate lyase TERM 953 636065 - 636042 - f 86 -8.9 -4.63218 | gap 1, overlap 636043 TCTTGCGTAAGAAAA GGGCCACCTG CTCGC CAGGT-GCCC AATCCTGAAAATTGC TERM 954 636065 - 636043 - f 72 -9.1 -3.3761 | overlap 636042 CTTGCGTAAGAAAAG GGCCACCTG CTCGC CAGGTGCCC AATCCTGAAAATTGC purC 636109 - 636831 + | phosphoribosylaminoimidazole-succinocarboxamide synthase purS 636824 - 637078 + | phosphoribosylformylglycinamidine synthase subunit PurS purQ 637075 - 637758 + | phosphoribosylformylglycinamidine synthase subunit I TERM 955 639283 - 639269 - g 79 -8.6 -4.09108 | GGTAACCCAGAGAAA CCAGAA ATT TTCTGG CAAATTGAAAAGTCT purL 637742 - 639973 + | phosphoribosylformylglycinamidine synthase II purF 639949 - 641379 + | amidophosphoribosyltransferase TERM 956 641390 - 641422 + F 74 -7.9 -3.9941 | gap 1, opp_overlap 641390 641389 641385 AATAATCGAATAAAG GAGCAGCA-GTCAA GATGAG TTGATATGCTGCTC TTTCATTCTGCCGAA purM 641475 - 642515 + | phosphoribosylaminoimidazole synthetase TERM 957 642672 - 642659 - g 72 -8.1 -3.86015 | opp_overlap 642658 642659 GAGCGTGCTGAGAAA GAGGG CATT CCCTC CTTTGCTTTTACCCC TERM 958 643071 - 643045 - g 86 -11.8 -2.92657 | opp_overlap 643045 643052, overlap 643031 643052 AGAACATACACTATA TCCAAAAGTGAT CAA ATCACTTTTAGA ATTATCTTAATGAGG TERM 959 643045 - 643071 + G 70 -9.6 -2.82449 | opp_overlap 643031 643045 643052, overlap 643052 AGAACATACACTATA TCCAAAAGTGAT CAA ATCACTTTTAGA ATTATCTTAATGAGG TERM 960 643064 - 643052 - g 72 -6.3 -4.2535 | opp_overlap 643045 643052, overlap 643045 ACACTATATCCAAAA GTGAT CAA ATCAC TTTTAGAATTATCTT purN 642512 - 643081 + | phosphoribosylglycinamide formyltransferase purH 643097 - 644635 + | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase TERM 961 645634 - 645614 - g 80 -9.7 -3.60296 | opp_overlap 645613 645610 GACTTGCAGTGGAAA GACACTGCC GCT GTCAGTGTC GTACTTGCTTCAGAA TERM 962 645761 - 645748 - g 82 -2.4 -5.64328 | AACAAAAAAAGAAAA TGAC CAATTC GTCA CAAATGGCGGACGTG purD 644648 - 645922 + | phosphoribosylamine--glycine ligase TERM 963 646009 - 646044 + F 100 -9.2 -5.58179 | opp_overlap 646009 TATTTGTTATAAAAA TACATCCATTAAATCT TTAT AGAGATAATGGATGTA TTTTTTATTGTGGTC TERM 964 646044 - 646009 - f 90 -9.2 -4.83615 | opp_overlap 646009 TATTTGTTATAAAAA TACATCCATTAAATCT TTAT AGAGATAATGGATGTA TTTTTTATTGTGGTC TERM 965 647448 - 647436 - g 80 -2.7 -5.4477 | AAATTCTTAAAAAAA TTCGA TGA TCAAA TACCATTAGAATTTA BPUM_0608 646194 - 649241 + | helicase BPUM_0609 649392 - 649586 + | hypothetical protein BPUM_0610 649608 - 650453 + | acetyltransferase BPUM_0611 652106 - 650448 - | hypothetical protein TERM 966 651789 - 651804 + g 71 -4.6 -4.59853 | overlap 651791 CGGCGGAATCTCGAT GAGCGG AATG CCGCTA TTTTTCGCCGCTTGA TERM 967 651791 - 651802 + g 72 -7.2 -3.91164 | overlap 651789 GCGGAATCTCGATGA GCGG AATG CCGC TATTTTTCGCCGCTT yodT 652297 - 653661 + | hypothetical protein TERM 968 653748 - 653769 + G 91 -13 -2.79098 | overlap 653746 CATGTTTGGCGGGTT TGGCGGCG TAGGAT CGCCGCCA TCATTGATCGATGCC atoD 653674 - 654360 + | acetate CoA-transferase alpha subunit yodR 654336 - 655001 + | aetate CoA-transferase beta subunit TERM 969 655082 - 655061 - g 71 -8.7 -3.26813 | overlap 655064 ATGAGAGAGCACCAA GATGAAGCG ATTG CGCTTCTTC AGCAAATGGTGCAAT yodQ 655016 - 656287 + | acetylornithine deacetylase TERM 970 656353 - 656309 - T 100 -13.1 -5.4111 | opp_overlap 656318, overlap 656312 AATAATCACAAAAAA GAAGACAAAGTGCTAAAATCA AGA TCATTTTAGCACTTTGTCAAC AATTTGAAAGAAGGC TERM 971 656350 - 656312 - T 100 -17.8 -4.75967 | opp_overlap 656318, overlap 656309 AATCACAAAAAAGAA GACAAAGTGCTAAAATCA AGA TCATTTTAGCACTTTGTC AACAATTTGAAAGAA TERM 972 656318 - 656344 + T 81 -9.6 -3.88583 | opp_overlap 656312 656309 AAAAAAGAAGACAAA GTGCTAAAATCA AGA TCATTTTAGCAC TTTGTCAACAATTTG TERM 973 656361 - 656386 + T 75 -7.6 -4.18367 | opp_overlap 656363 656366, overlap 656363 TTGTCAACAATTTGA AAGAAGGCTG TTCACT CAGCCTTCTC TTTATGTGTGTCCTG TERM 974 656363 - 656384 + T 80 -10.2 -3.68183 | opp_overlap 656363 656366, overlap 656361 GTCAACAATTTGAAA GAAGGCTG TTCACT CAGCCTTC TCTTTATGTGTGTCC TERM 975 656384 - 656363 - T 81 -10.2 -3.72051 | opp_overlap 656363 656361, overlap 656366 GTCAACAATTTGAAA GAAGGCTG TTCACT CAGCCTTC TCTTTATGTGTGTCC BPUM_0616 656593 - 656372 - | hypothetical protein TERM 976 657526 - 657548 + G 82 -5.6 -4.96848 | GAGAGTTGCATGAGC GTGATTTTAG ACA CTATGATCAC TTTTTCTATACAACA yerA 656718 - 658460 + | adenine deaminase BPUM_0618 658913 - 658728 - | hypothetical protein yerC 659010 - 659324 + | sporulation protein YerC TERM 977 659338 - 659327 - f 75 -2.2 -5.34857 | opp_overlap 659336 CGAAACAAAATAAAA CAGC TTTC ACTG TAAACAATTCTTTTC TERM 978 659336 - 659376 + F 93 -7 -5.60993 | opp_overlap 659327 ATAAAACAGCTTTCA CTGTAAACAATTCTTTTC GACAA GAATGGCGTTGTTTACAG TTTTTTTATGAAGAG TERM 979 659435 - 659407 - g 73 -3.9 -5.04249 | gap 1, opp_overlap 659408 659410, overlap 659410 CGCTGAAAAAACAAA CAAGGACTGGCT GAAAGA AGCGAGTCCT-G TTTTTTATTTTAGCT TERM 980 659408 - 659435 + G 93 -4.1 -5.80951 | opp_overlap 659407 659410, overlap 659410 GCTGAAAAAACAAAC AAGGACTGGCT GAAAGA AGCGAGTCCTG TTTTTTATTTTAGCT TERM 981 659410 - 659433 + G 76 -6.7 -4.53077 | opp_overlap 659410 659407, overlap 659408 TGAAAAAACAAACAA GGACTGGCT GAAAGA AGCGAGTCC TGTTTTTTATTTTAG TERM 982 659433 - 659410 - g 79 -6.7 -4.59882 | opp_overlap 659408 659410, overlap 659407 TGAAAAAACAAACAA GGACTGGCT GAAAGA AGCGAGTCC TGTTTTTTATTTTAG BPUM_0620 659384 - 659605 + | hypothetical protein TERM 983 659612 - 659597 - T 90 -6.8 -5.53288 | opp_overlap 659597 GTCAATCGAAAAAAA GGTGCA TAAA CGCACC TTTTCTCAAACTAGA TERM 984 659597 - 659612 + T 72 -6.1 -4.38712 | opp_overlap 659597 GTCAATCGAAAAAAA GGTGC ATAAAC GCACC TTTTCTCAAACTAGA yerD 661203 - 659623 - | glutamate synthase (ferredoxin) TERM 985 659772 - 659756 - G 78 -7.3 -4.51765 | GATAAGTTAAACAAA CCTTCTC TTA GAGAAAG GATATAATTGCAGAC ybyB 661343 - 661573 + | hypothetical protein TERM 986 661573 - 661617 + T 100 -5.2 -5.94597 | gap 1, opp_overlap 661573 661584, overlap 661584 TGAAGCGAGACAATA GTTTGGAAAAA-CCGTTTTGA CCAT TCAAAACGGTTTTTTCTTGTC TTTTTTTTGATGTTA BPUM_0623 661967 - 661554 - | hypothetical protein TERM 987 661584 - 661605 + g 100 -11.7 -5.66338 | opp_overlap 661584, overlap 661573 AATAGTTTGGAAAAA CCGTTTTGA CCAT TCAAAACGG TTTTTTCTTGTCTTT TERM 988 661605 - 661584 - G 100 -11.7 -4.59511 | opp_overlap 661573 661584 AATAGTTTGGAAAAA CCGTTTTGA CCAT TCAAAACGG TTTTTTCTTGTCTTT TERM 989 662779 - 662763 - g 70 -5.1 -4.46514 | overlap 662764 AGTTAGTGAAAGAAA CGAAAGC AGT GCTTTCT GATACGGTTCTTTTT pcrB 662123 - 662932 + | geranylgeranylglyceryl phosphate synthase-like protein TERM 990 664898 - 664878 - g 73 -9.1 -3.51934 | opp_overlap 664883, overlap 664876 TCGGCCGGACAAACA TGAACCTTG AAT CAAGATTCA TTCGAGAAATACCAG TERM 991 664965 - 664950 - g 75 -3.3 -5.1471 | ATGAGAAAAAAGAAA CCAAA ACACCA TTTGG CCAAACAAGAGAACG pcrA 662990 - 665212 + | ATP-dependent DNA helicase ligA 665257 - 667263 + | NAD-dependent DNA ligase LigA yerH 667279 - 668466 + | hypothetical protein TERM 992 668493 - 668468 - f 83 -10.5 -3.8381 | opp_overlap 668474 668490, overlap 668474 ATATATATGACTAAA TAAAAACCGCC TTTT GGCGGTTTTTT AAATTAGTTAAAATG TERM 993 668487 - 668474 - f 100 -9.5 -5.34309 | opp_overlap 668474, overlap 668468 ATGACTAAATAAAAA CCGCC TTTT GGCGG TTTTTTAAATTAGTT TERM 994 668474 - 668487 + F 100 -9.5 -5.1848 | opp_overlap 668474 668468 ATGACTAAATAAAAA CCGCC TTTT GGCGG TTTTTTAAATTAGTT yfmI 668567 - 669799 + | major facilitator superfamily macrolide:cation transporter TERM 995 671061 - 671037 - g 75 -5.7 -4.72986 | GAGTGGGATGAAAAA GGACAAATTGA GCT TCAATATGACC ACAAGATCTCAGACT BPUM_0629 669948 - 674360 + | nonribosomal peptide synthetase subunit TERM 996 674863 - 674850 - g 84 -5.3 -5.40474 | ATGCGTTGAAAAAAA CAGTT GATC AACTG AAATCAATCGAGCTC pbpX 674357 - 675898 + | beta-lactamase bacT 676838 - 677548 + | thioesterase TERM 997 678090 - 678077 - g 74 -6.7 -4.37658 | AATCGTTTGATAAAA CACCA GTTG TGGTG CATGATTTTCCGGGA BPUM_0632 677545 - 678402 + | 3-hydroxybutyryl-CoA dehydrogenase BPUM_0633 678417 - 679472 + | methoxymalonyl-ACP biosynthesis protein BPUM_0634 679500 - 679769 + | hypothetical protein BPUM_0635 679756 - 680898 + | acyl-CoA dehydrogenase (NADP(+)) TERM 998 686781 - 686768 - f 78 -3.1 -5.38549 | GTGAAACAAGAAAAA CCAAA GCAG TCTGG ACGAAAGCAGCAAAT TERM 999 686888 - 686901 + F 71 -6.7 -4.07687 | GCCTTGCTTTTGTTT GCAGA TCCA TCTGC TTTTGGAGAGAAGGT TERM 1000 687303 - 687284 - f 72 -5.7 -4.59773 | gap 1, overlap 687286 CTTTATCCTGAAAAA GC-GGTCC ATTTA GGACCTGC CATGGTGATTTCACA BPUM_0636 690025 - 692694 + | nonribosomal peptide synthetase subunit TERM 1001 693360 - 693326 - g 81 -5.1 -5.24531 | gap 1 ACCCCTCACAAAAAA GGATACATGTATCAAG AGGG CATGAT-CATGTCTCC AGATGGGCACTGCCG TERM 1002 694109 - 694099 - g 75 -3.2 -5.093 | TTTAAAAGAACAAAA GCGT GTC ACAC TATCCGAGGCTGCCT BPUM_0637 692687 - 697192 + | polyketide synthase subunit TERM 1003 699477 - 699459 - g 76 -8.1 -4.09649 | opp_overlap 699463 CAGAGGAGAAAAATA GGCAGCG TATTC CGCTACC GGGGTACCCATTTCA TERM 1004 703357 - 703347 - g 73 -8.2 -3.6849 | overlap 703348 ATTTAACTGGAAGAA CGGC ATT GCCG CCAAGAAATGAATGG BPUM_0638 697193 - 704443 + | polyketide synthase subunit TERM 1005 709501 - 709478 - g 71 -3.2 -5.07652 | gap 1, opp_overlap 709479 709481 709482, overlap 709482 CTTTTTAAAACAAAA GCAA-CAAGAG GGT CTCTTGCTTGT CTTAAGTAGCAGGAA TERM 1006 709496 - 709482 - g 77 -8.6 -3.93251 | opp_overlap 709481 709479 709482, overlap 709478 TTAAAACAAAAGCAA CAAGAG GGT CTCTTG CTTGTCTTAAGTAGC BPUM_0639 704436 - 710846 + | polyketide synthase subunit yerI 710839 - 711846 + | homoserine kinase type II TERM 1007 711852 - 711883 + T 100 -11 -5.24531 | gap 1, opp_overlap 711855, overlap 711855 TCAATCTTAACATCA AAATCCCCGCCT-AT GTG ATGAGGCGGGGATTG TTTTTTATGGGCGAT TERM 1008 711880 - 711855 - T 100 -12.7 -4.43012 | gap 1, opp_overlap 711852 711855 ATCTTAACATCAAAA TCCCCGCCT-AT GTG ATGAGGCGGGGA TTGTTTTTTATGGGC TERM 1009 711855 - 711880 + T 100 -12.7 -4.72201 | gap 1, opp_overlap 711855, overlap 711852 ATCTTAACATCAAAA TCCCCGCCT-AT GTG ATGAGGCGGGGA TTGTTTTTTATGGGC phoB 713294 - 711888 - | alkaline phosphatase TERM 1010 713405 - 713380 - R 100 -14.1 -5.60993 | opp_overlap 713380 TTTCCTATAAAAAAA GGTGATGAGAC TTTT GCCTCATCACC TTTTATACCGTATCA TERM 1011 713380 - 713405 + r 100 -11.9 -4.41548 | opp_overlap 713380 TTTCCTATAAAAAAA GGTGATGAGAC TTTT GCCTCATCACC TTTTATACCGTATCA sapB 714100 - 713408 - | membrane protein SapB TERM 1012 713608 - 713637 + g 78 -5.1 -4.94262 | gap 1, overlap 713610 TATCCGTCATACGGT TTCG-ATCAGAAAG AGA CATTCTGATGCGGA TTTCTTTTTCCTGTA TERM 1013 714256 - 714225 - R 91 -8.1 -5.09225 | gap 1, opp_overlap 714225 714226, overlap 714227 ATTTTATTTAAAAAA GA-GAGTCATCCGC TTAAG GCAGATGACCCCTC ATGTTCTTTATTTTG TERM 1014 714253 - 714227 - R 86 -10.9 -4.17608 | opp_overlap 714226 714225, overlap 714225 TTTATTTAAAAAAGA GAGTCATCCGC TTAAG GCAGATGACCC CTCATGTTCTTTATT opuE 715745 - 714264 - | SSS family proline/sodium (Na+) symporter OpuE TERM 1015 715363 - 715373 + g 74 -6.8 -4.26903 | opp_overlap 715361 715358 ATCATAATAATAACA GCTG AGA CAGC TTTTAATAAAGTAGA gatC 716144 - 716434 + | aspartyl/glutamyl-tRNA amidotransferase subunit C TERM 1016 717848 - 717860 + G 73 -9.1 -3.53012 | AAGGAACGGTTTACC GCGTG GCT CACGC TTTCGAGCAAGCAAC gatA 716449 - 717906 + | aspartyl/glutamyl-tRNA amidotransferase subunit A TERM 1017 718212 - 718183 - g 70 -7.3 -3.80625 | TCCTGATAACCCAAA GGCGTATCAAATT TCTC AATTTGATAAACC GATCGGTGAAAACGG TERM 1018 718569 - 718550 - g 70 -7.2 -3.8125 | opp_overlap 718550 TTTGGAACGAAAACA GAGCTCAA GAAC TTGAACTC ATTTGCTTTCGTACA gatB 717920 - 719350 + | aspartyl/glutamyl-tRNA amidotransferase subunit B TERM 1019 719356 - 719345 - T 75 -2.2 -5.46129 | GAAGAAATCAAAAAA CGCT AATT AGCA AAAAACCGCCTCATG TERM 1020 719382 - 719362 - T 100 -11.1 -5.2189 | opp_overlap 719362 CTAATTAGCAAAAAA CCGCCTCAT GAG AAGAGGCGG TTTTTTTATTTGAAC TERM 1021 719362 - 719382 + T 100 -11.1 -5.95539 | opp_overlap 719362 CTAATTAGCAAAAAA CCGCCTCAT GAG AAGAGGCGG TTTTTTTATTTGAAC yerO 720378 - 719533 - | transcriptional regulator TERM 1022 719896 - 719886 - G 71 -6.8 -4.09685 | TCTGATCTTGTAAAA GCAG CAC CTGC ACATACGATTGGATG TERM 1023 720098 - 720127 + g 76 -10.1 -3.3095 | opp_overlap 720104 720105, overlap 720092 720103 AAATCCTTGTTTTCA GCAAAATGCTGAA ACTG TTCAGCGATTTGC TTCTGGAAGATCTCT TERM 1024 721839 - 721819 - g 80 -10.5 -3.5218 | overlap 721817 ATATCACATTAAATA TCATGACAC TTG GTGCCATGA CGGTCGCCATTGGAC TERM 1025 722820 - 722808 - g 75 -3.3 -5.16841 | opp_overlap 722808 GCAGATCAAGAAAAA CTGGC GAA GCTAG GTTTAACTGCTTCAC swrC 720510 - 723734 + | resistance-nodulation-cell division acriflavin:proton (H+) antiporter TERM 1026 723741 - 723760 + T 100 -9.2 -5.80817 | opp_overlap 723735 723737 723741, overlap 723735 GAAGAATAAGAGGAA GCCCCGTT TATT GGCGGGGC TTTTTTTATGTTGAA BPUM_0649 724719 - 723766 - | purine nucleosidase yerQ 724901 - 725809 + | putative lipid kinase TERM 1027 725818 - 725839 + F 88 -6.5 -5.27938 | opp_overlap 725818 AGGGTAGAGATTGAA CTTGGTTCC GTAT GGCGCCAAG TTTTTCTTTGCAAAT yefA 725867 - 727264 + | TrmA family RNA methyltransferase TERM 1028 727292 - 727327 + F 73 -6.8 -4.22214 | CTATTCAAATATTGA GGCGGCAAATCGGTAA TGTA TTATCGGAGTGCCGTC TTCTTTTACATCGAT TERM 1029 728983 - 728952 - g 70 -2.5 -5.08088 | overlap 728953 AAGTTTCAACAAAAA CTCATTCTTATTT TCGTTT AAATAAGAATAAT AGCTATTTGAAAGAC BPUM_0652 727814 - 729304 + | ATP-binding protein BPUM_0653 729297 - 732107 + | endonuclease BPUM_0654 732089 - 733117 + | hypothetical protein TERM 1030 734901 - 734857 - g 70 -5.9 -4.38876 | opp_overlap 734864, overlap 734864 734867 TTAAAAATAGAGAAA TATATAAGAAGCAGTTCATTA ATT TAATGAACTACTTCTTTTTCT TTGTTAAGTAACTGT BPUM_0655 733114 - 734883 + | hypothetical protein TERM 1031 734864 - 734894 + T 100 -12.8 -5.47159 | opp_overlap 734857 734864 734867 TAGAGAAATATATAA GAAGCAGTTCATTA ATT TAATGAACTACTTC TTTTTCTTTGTTAAG TERM 1032 734894 - 734864 - T 100 -15 -3.81885 | opp_overlap 734864, overlap 734857 734867 TAGAGAAATATATAA GAAGCAGTTCATTA ATT TAATGAACTACTTC TTTTTCTTTGTTAAG TERM 1033 734891 - 734867 - T 86 -10.9 -4.01227 | opp_overlap 734864, overlap 734864 734857 AGAAATATATAAGAA GCAGTTCATTA ATT TAATGAACTAC TTCTTTTTCTTTGTT BPUM_0656 736526 - 734880 - | DNA (cytosine-5-)-methyltransferase yfjN 736808 - 737782 + | tRNA-dihydrouridine synthase TERM 1034 737809 - 737790 - f 84 -7.8 -4.7871 | opp_overlap 737790 AATCATGATGAAAAA GAGGAGGG GATG CCCTTCTC TTTTTTCTATGAATA TERM 1035 737790 - 737809 + F 100 -10 -5.38047 | opp_overlap 737790 AATCATGATGAAAAA GAGGAGGG GATG CCCTTCTC TTTTTTCTATGAATA BPUM_0658 737890 - 738342 + | hypothetical protein TERM 1036 738392 - 738411 + T 100 -10.8 -5.24129 | opp_overlap 738396 TTTGGAGTTTTTTGA GAGAGACA AAAG TGTCTCTC TTTTTTGTGAAGAAA glvR 739238 - 738474 - | transcriptional regulator TERM 1037 739645 - 739627 - g 79 -3.1 -5.40072 | gap 1, opp_overlap 739639, overlap 739629 739636 TCTCTTGCAAAAAAA GCGCAAGC ACGT GCT-ACGC TCGCAGCTTTGATGA malP 739387 - 740967 + | PTS family porter component IIBC TERM 1038 741730 - 741716 - g 73 -5.6 -4.47259 | overlap 741708 741718 ACTAGAACAGCAAAA GAGCTG GAA CAGCAC ATTAAAAAAAGCCAA glvA 740994 - 742322 + | maltose-6'-phosphate glucosidase TERM 1039 742366 - 742331 - T 81 -10.6 -3.56445 | opp_overlap 742331, overlap 742334 AACATAACACGAGAA TAAGCAATATGGGCGT TACA ATGCTCATATTGCTTA TTTTTTTCAATCGAT TERM 1040 742331 - 742366 + T 100 -15 -5.47821 | opp_overlap 742331 742334 AACATAACACGAGAA TAAGCAATATGGGCGT TACA ATGCTCATATTGCTTA TTTTTTTCAATCGAT TERM 1041 742363 - 742334 - T 74 -7.9 -3.89893 | opp_overlap 742331, overlap 742331 ATAACACGAGAATAA GCAATATGGGCGT TACA ATGCTCATATTGC TTATTTTTTTCAATC TERM 1042 742425 - 742403 - T 100 -16.4 -4.39287 | opp_overlap 742399 742397 742395 742422 TGAAGGAGACGAAAA GACCCCCTTT TCA AAAGGGGGTC ACCATGTCCTTACTC BPUM_0662 742806 - 742435 - | hypothetical protein BPUM_0663 742990 - 743427 + | transcriptional regulator BPUM_0664 743493 - 744407 + | thioredoxin-disulfide reductase TERM 1043 744415 - 744397 - T 100 -7.5 -5.45652 | opp_overlap 744397 AGTTTCAAGAAAAAA CATCTCT ATAAA AGAGATG TTTAGCGATGAACGG TERM 1044 744397 - 744415 + T 70 -7.5 -3.57144 | opp_overlap 744397 AGTTTCAAGAAAAAA CATCTCT ATAAA AGAGATG TTTAGCGATGAACGG BPUM_0665 744617 - 744417 - | hypothetical protein BPUM_0666 744731 - 745378 + | hypothetical protein TERM 1045 745404 - 745384 - T 93 -11.2 -5.06472 | opp_overlap 745384 745379 AGAGAAATAAGAAAA CCGCACTT TTGAC AAGTGCGG TTCAGTTTTATGCTT TERM 1046 745384 - 745404 + T 83 -11.2 -3.43261 | opp_overlap 745384, overlap 745379 AGAGAAATAAGAAAA CCGCACTT TTGAC AAGTGCGG TTCAGTTTTATGCTT licH1 746740 - 745412 - | 6-phospho-beta-glucosidase BPUM_0668 746940 - 747671 + | transcriptional regulator TERM 1047 747672 - 747700 + F 81 -4.5 -5.38249 | opp_overlap 747674 747692, overlap 747674 TTAAAGGAAAAGTAA AAGAGCCGCTG CACGAAT CAGCCGCTCTC TTTTTTCTGCTTCAT TERM 1048 747674 - 747698 + F 76 -7.1 -4.31563 | opp_overlap 747674 747692, overlap 747672 AAAGGAAAAGTAAAA GAGCCGCTG CACGAAT CAGCCGCTC TCTTTTTTCTGCTTC TERM 1049 747698 - 747674 - f 81 -7.1 -4.74084 | opp_overlap 747674 747672, overlap 747692 AAAGGAAAAGTAAAA GAGCCGCTG CACGAAT CAGCCGCTC TCTTTTTTCTGCTTC TERM 1050 749484 - 749474 - g 74 -6.8 -4.39133 | overlap 749482 GAACAATTAGTAAAA GCCT CAA AGGC TGTACCATATGACAT BPUM_0671 749039 - 749518 + | prolyl-tRNA synthetase TERM 1051 749548 - 749520 - T 95 -13.3 -3.2059 | opp_overlap 749525, overlap 749525 AGCCAGCAGAATAGA TAAAAGTGCCTGT CAT ACAGGCACTTTTT TTAATTTGCAGCCGG TERM 1052 749543 - 749525 - T 100 -13.2 -4.71223 | opp_overlap 749525, overlap 749520 GCAGAATAGATAAAA GTGCCTGT CAT ACAGGCAC TTTTTTTAATTTGCA TERM 1053 749525 - 749543 + T 100 -13.2 -5.72207 | opp_overlap 749525 749520 GCAGAATAGATAAAA GTGCCTGT CAT ACAGGCAC TTTTTTTAATTTGCA cisL 750502 - 749549 - | LysR family transcriptional regulator BPUM_0673 750561 - 751760 + | major facilitator transporter TERM 1054 751788 - 751770 - T 73 -2.5 -5.20328 | gap 1, opp_overlap 751782 751785, overlap 751772 751785 GCGTAAAAAAATAAA GC-GTTTT ATAA AAAACTGC CTCATGCAGCTGATC TERM 1055 751814 - 751785 - T 100 -10 -5.24129 | opp_overlap 751782 751785, overlap 751770 GCGTTTTATAAAAAA CTGCCTCATGCA GCTGAT CGCAGGAGGCAG TCATATTCTTTTATT TERM 1056 751785 - 751814 + T 73 -9.3 -2.96866 | opp_overlap 751770 751785, overlap 751782 GCGTTTTATAAAAAA CTGCCTCATGC AGCTGATC GCAGGAGGCAG TCATATTCTTTTATT yetN 752904 - 751825 - | hypothetical protein TERM 1057 752551 - 752535 - G 90 -4.3 -5.64006 | overlap 752536 ACGCAACTAAAAAAA CGCCGCC TCT GACAGCA CTTGTATCTAAATAC TERM 1058 752737 - 752747 + g 95 -5.4 -5.81412 | GTGTCTGTCCACTTT TCGT TTG ACGA TTTTTTTTAGCTCAC TERM 1059 753057 - 753034 - R 81 -9.8 -3.81848 | opp_overlap 753025, overlap 753024 AACACTTGATAATAA TTATCATTCT TGAT AGAATGATAA AAGAAAAGAAGGAAC TERM 1060 753086 - 753065 - R 100 -9.5 -5.22137 | opp_overlap 753068 AATGATAAAAGAAAA GAAGGAACC TGCC AGTTCCTTC ATCTCAGAAAAATTA BPUM_0675 753252 - 753103 - | hypothetical protein TERM 1061 753432 - 753410 - H 81 -10.6 -3.64236 | opp_overlap 753410 ATTTAAACTTTGAAA GAGCGAGAAT ACA AATCTCGCTC TTTTTTTATTTGTAA TERM 1062 753410 - 753432 + H 100 -10.6 -6.02919 | opp_overlap 753410 ATTTAAACTTTGAAA GAGCGAGAAT ACA AATCTCGCTC TTTTTTTATTTGTAA yfnH 753608 - 754372 + | glucose-1-phosphate cytidylyltransferase TERM 1063 754990 - 754969 - gf 80 -10.1 -3.56568 | GAATCATTCCGCAAA CCATCCAGC TTGT GCTGGAAGG GGAAGCGCCTGAAAT yfnG 754344 - 755348 + | NAD-dependent epimerase/dehydratase TERM 1064 755590 - 755574 - g 73 -2.9 -5.24129 | overlap 755580 CTGCTGGAGAAAAAA GAGGAAC GGG ATGCCTC GGAATATTGCTGGAC yfnF 755361 - 756272 + | glycosyltransferase TERM 1065 756600 - 756583 - g 76 -7.7 -4.21275 | GCAATTTATTCAAAA GCATGCG GAGG CACATGC TCATCAAGAGGACCT TERM 1066 756866 - 756877 + G 78 -2.2 -5.45652 | TTAGGCTCTTATGAG TTGC CGTG GCGA TTTTTTATTACGAAT yfnE 756269 - 757459 + | glycosyltransferase yfnD 757460 - 758389 + | glycosyltransferase TERM 1067 758423 - 758385 - Tf 90 -12.6 -2.79183 | opp_overlap 758395, overlap 758395 CGCATTTTTATGAGA TATGAAAAAACCGCTCAA TCA CTGAGCGGTTTTTTCCTT TTTATGATTCATTCC TERM 1068 758413 - 758395 - Tf 100 -11 -5.24989 | opp_overlap 758395, overlap 758385 TGAGATATGAAAAAA CCGCTCAA TCA CTGAGCGG TTTTTTCCTTTTTAT TERM 1069 758395 - 758413 + TF 100 -10.3 -5.56112 | opp_overlap 758385 758395 TGAGATATGAAAAAA CCGCTCA ATCAC TGAGCGG TTTTTTCCTTTTTAT BPUM_0681 759663 - 758425 - | major facilitator superfamily fosmidomycin:cation antiporter TERM 1070 759790 - 759769 - gR 100 -11.7 -5.28778 | opp_overlap 759773 ATGATTTAGAAAAAA GAGACACAA GTTT TTGTGTCTC TCAGATTGTTGACAA BPUM_0682 759663 - 759818 + | hypothetical protein TERM 1071 759801 - 759839 + Tr 100 -20 -4.18506 | opp_overlap 759807, overlap 759807 GTCTCTCAGATTGTT GACAAAGAGCTAAAATGA TCT TTATTTTAGCTCTTTGTC TTCTTTTCAGCGTGA TERM 1072 759833 - 759807 - TR 81 -9.6 -3.87373 | opp_overlap 759801 759807 CAGATTGTTGACAAA GAGCTAAAATGA TCT TTATTTTAGCTC TTTGTCTTCTTTTCA TERM 1073 759807 - 759833 + Tr 100 -11.8 -4.45253 | opp_overlap 759807, overlap 759801 CAGATTGTTGACAAA GAGCTAAAATGA TCT TTATTTTAGCTC TTTGTCTTCTTTTCA BPUM_0683 762036 - 759997 - | penicillin-binding protein TERM 1074 760087 - 760101 + g 71 -2.1 -5.09426 | overlap 760083 TTCAATCATACCGAC GAGGA CGTAA TCTTC TTTTTTAGGATTAAA TERM 1075 761900 - 761910 + g 75 -5.4 -4.80077 | opp_overlap 761909, overlap 761909 GTAAAGGATTGAGCC GCTT TTA AAGC TTCTTTTTCTTTTGA TERM 1076 763101 - 763122 + G 70 -2.9 -4.98758 | opp_overlap 763087, overlap 763102 GGAAAAATGGGTGTT TGCCGTTTT TCTC ACGACGGCG TTTTTGTGGATTTTT TERM 1077 763257 - 763282 + G 74 -4.7 -4.87803 | gap 1, opp_overlap 763261 763264 AGAATGGCAGGATAT GAAACAGCTGCC GTG GG-GGCTGTTGC TTTTGTTTGGAGGTG BPUM_0684 762298 - 763713 + | DASS family divalent anion:sodium (Na+) symporter yocL 764072 - 763719 - | hypothetical protein yocM 764843 - 764364 - | heat shock protein yozN 764909 - 765166 + | hypothetical protein yocN 765173 - 765406 + | hypothetical protein TERM 1078 765438 - 765416 - T 100 -9.9 -5.63103 | gap 1, opp_overlap 765416 GTTTAAGCAAAAAAA GAGAC-CGGG AATC CCCGTGTCTC TTTTCTAATGCGTTT TERM 1079 765416 - 765438 + T 89 -9.9 -4.49344 | gap 1, opp_overlap 765416 GTTTAAGCAAAAAAA GAGAC-CGGG AATC CCCGTGTCTC TTTTCTAATGCGTTT yfnA 766834 - 765443 - | APC family amino acid-polyamine-organocation transporter TERM 1080 765757 - 765786 + g 76 -7.9 -4.21402 | gap 1, opp_overlap 765746 765759 TACATGCTGCGACAG CACCTGTCAGCCAA GTA TTGGCA-ACGGGTG TTTGTGATTTTGGAT TERM 1081 766409 - 766367 - G 100 -13.4 -3.66178 | opp_overlap 766370, overlap 766370 GCCTGGAAGGTTAAA GACGGCTCCATCAGCGGCTC CAG GTGCAGCTGATAAAGCCTTC GGTATGTGCACACCA TERM 1082 766370 - 766406 + g 72 -9.3 -3.15999 | opp_overlap 766367 766370 TGGAAGGTTAAAGAC GGCTCCATCAGCGGCTC CAG GTGCAGCTGATAAAGCC TTCGGTATGTGCACA TERM 1083 766406 - 766370 - G 93 -13.7 -2.64412 | opp_overlap 766370, overlap 766367 TGGAAGGTTAAAGAC GGCTCCATCAGCGGCTC CAG GTGCAGCTGATAAAGCC TTCGGTATGTGCACA TERM 1084 766937 - 766918 - R 79 -7.2 -4.58283 | CAATTGGTTGAAAAA CGCTTTAA ATCA CTAAAGCG TTGAGCGCCACCATC BPUM_0690 768088 - 767015 - | glycosyltransferase TERM 1085 767521 - 767498 - G 78 -7.4 -4.55128 | ATTGGCAAAGTAAAA GAGGTCACGA GGCG TCATGTCCTC TCCCCTTGCCAGCAT TERM 1086 769888 - 769876 - g 76 -2.7 -5.40072 | CGGCGCCTAAAAAAA GAAAA AAA CTTTC TTACAAAGACCAGCT yfmR 768222 - 770105 + | ABC transporter ATP-binding protein TERM 1087 770157 - 770126 - f 81 -10.3 -3.61219 | opp_overlap 770131, overlap 770131 ATAAAATGTTTGAAA TAAAACCCTGTAG GACATT CTACAGGGTTTTT TCCTTTACCTCAAAA TERM 1088 770152 - 770131 - f 93 -10.2 -4.87133 | opp_overlap 770131, overlap 770126 ATGTTTGAAATAAAA CCCTGTAG GACATT CTACAGGG TTTTTTCCTTTACCT TERM 1089 770131 - 770152 + F 100 -10.9 -5.38497 | opp_overlap 770131 770126 ATGTTTGAAATAAAA CCCTGTAGG ACAT TCTACAGGG TTTTTTCCTTTACCT TERM 1090 770624 - 770607 - g 76 -2.7 -5.38249 | opp_overlap 770609 770623, overlap 770609 770623 ATTAATTACAAAAAA GCTTGAA ACGA TTCAATC CTTTAAAAAGGATCT yfmP 770266 - 770691 + | transcriptional regulator TERM 1091 770708 - 770689 - f 74 -5.1 -4.99861 | opp_overlap 770684 770689 GAGCAACTACAAAAA TAAACAC CTCAGT GTGTTTA TTTTATTTTGTCAAC TERM 1092 770689 - 770708 + F 79 -5.1 -5.18371 | opp_overlap 770689, overlap 770684 GAGCAACTACAAAAA TAAACAC CTCAGT GTGTTTA TTTTATTTTGTCAAC yfmO 770748 - 771938 + | major facilitator superfamily multidrug:cation symporter TERM 1093 771974 - 771948 - T 100 -12.5 -5.83211 | opp_overlap 771948 CATTAAAAGAAAAAA GCCTTATATCT TTTGC AGATATAAGGC TTTTTGCCGTTATAA TERM 1094 771948 - 771974 + T 100 -12.5 -4.6902 | opp_overlap 771948 CATTAAAAGAAAAAA GCCTTATATCT TTTGC AGATATAAGGC TTTTTGCCGTTATAA yfmM 773537 - 771984 - | ABC transporter ATP-binding protein TERM 1095 773508 - 773489 - G 87 -8.6 -4.57837 | opp_overlap 773489 773499 AGACTTCGTGAAAAA TGGCTCTG TCGC CAAAGCCA TGGCTTAAATCTTTA TERM 1096 774240 - 774218 - g 72 -6.4 -4.37534 | opp_overlap 774224 AAATCCACACTAAAA GAAAGACAAA TCC TTTGTTTTTC TGCGACCTTGAAAGA TERM 1097 774224 - 774234 + G 71 -4 -4.84017 | opp_overlap 774218 ACACTAAAAGAAAGA CAAA TCC TTTG TTTTTCTGCGACCTT yfmL 773690 - 774832 + | ATP-dependent RNA helicase TERM 1098 774859 - 774837 - T 79 -4.1 -5.38249 | gap 1, overlap 774838 AGCAAGCATAAAAAA GGACCCTGCC ACAT GG-AGGGTCT CAGCGTGTAGACAAA TERM 1099 774858 - 774838 - T 72 -7.6 -3.81322 | gap 1, overlap 774837 GCAAGCATAAAAAAG GACCCTGCC ACAT GG-AGGGTC TCAGCGTGTAGACAA TERM 1100 775027 - 774985 - T 100 -12.2 -4.60487 | opp_overlap 774993, overlap 774987 TATCACGCTGAAAAA GAGACAAAGGGCTAAAATCA AGA TCATTTTAGCCCTTTGTCAA CAATCTAAGGACCCT TERM 1101 775025 - 774987 - T 100 -19.2 -3.91506 | opp_overlap 774993, overlap 774985 TCACGCTGAAAAAGA GACAAAGGGCTAAAATCA AGA TCATTTTAGCCCTTTGTC AACAATCTAAGGACC TERM 1102 774993 - 775019 + T 86 -11 -3.87373 | opp_overlap 774987 774985 TGAAAAAGAGACAAA GGGCTAAAATCA AGA TCATTTTAGCCC TTTGTCAACAATCTA TERM 1103 775058 - 775036 - T 78 -9.9 -3.28745 | gap 1, opp_overlap 775036 TTGTCAACAATCTAA GGACCCTACC ACAT GG-AGGGTCC TTTCTTTTTATGAAA TERM 1104 775036 - 775058 + T 93 -9.9 -4.96501 | gap 1, opp_overlap 775036 TTGTCAACAATCTAA GGACCCTACC ACAT GG-AGGGTCC TTTCTTTTTATGAAA yfmJ 776070 - 775066 - | NADP-dependent dehydrogenase TERM 1105 776195 - 776167 - R 89 -6.7 -5.46276 | AACACATACAAAAAA GCAGCCACCATCT TAT AGATGAGGACTAC TTTTTTGGAAGTCAA yfmB 776568 - 776179 - | hypothetical protein BPUM_0698 776790 - 777137 + | general stress protein TERM 1106 777176 - 777155 - f 91 -8.7 -4.91712 | opp_overlap 777155 GCCAACTGAGAAAAA GCCTCTTAC TTTC GTAAGGGGC TTTTTTTCATGCCCC TERM 1107 777155 - 777176 + F 100 -10.9 -5.52384 | opp_overlap 777155 GCCAACTGAGAAAAA GCCTCTTAC TTTC GTAAGGGGC TTTTTTTCATGCCCC TERM 1108 778133 - 778115 - g 71 -4.6 -4.72272 | overlap 778117 TCCTGTGATGAAAAA GGCTTTAT ACC ATAAAGAC AGTGGGTTGTATCTA TERM 1109 778737 - 778722 - g 100 -10.4 -4.70319 | CCATTAAAAGCAAAA GCTGGC ATAA GCCAGC ACCATGTCATTGCCG BPUM_0699 778107 - 778763 + | hypothetical protein BPUM_0700 779044 - 779769 + | GTP cyclohydrolase II BPUM_0702 780611 - 782368 + | WD-40 repeat-containing protein TERM 1110 782622 - 782577 - f 89 -7.8 -5.10497 | gap 1, opp_overlap 782587 782590, overlap 782579 782585 782587 AACGGATGGAAAAAA TATGAGAATAGAACTCCTTCA TTTCT TGAAGGAGTTCT-TTCCCTTG AAAGAGAAGAAAGGA TERM 1111 782620 - 782579 - f 85 -10.4 -4.17608 | gap 1, opp_overlap 782587 782590, overlap 782577 782585 782587 CGGATGGAAAAAATA TGAGAATAGAACTCCTTCA TTTCT TGAAGGAGTTCT-TTCCCT TGAAAGAGAAGAAAG TERM 1112 782615 - 782585 - f 83 -11.3 -3.66574 | opp_overlap 782587 782590, overlap 782579 782577 782587 GAAAAAATATGAGAA TAGAACTCCTTCA TTTCT TGAAGGAGTTCTT TCCCTTGAAAGAGAA TERM 1113 782587 - 782613 + F 100 -13.9 -3.75153 | opp_overlap 782585 782579 782577 782587, overlap 782590 AAAAATATGAGAATA GAACTCCTTCA TTTCT TGAAGGAGTTC TTTCCCTTGAAAGAG TERM 1114 782613 - 782587 - f 100 -13.9 -3.38046 | opp_overlap 782587 782590, overlap 782585 782579 782577 AAAAATATGAGAATA GAACTCCTTCA TTTCT TGAAGGAGTTC TTTCCCTTGAAAGAG TERM 1115 782590 - 782610 + F 83 -9.8 -4.0098 | opp_overlap 782587 782585 782579 782577, overlap 782587 AATATGAGAATAGAA CTCCTTCA TTTCT TGAAGGAG TTCTTTCCCTTGAAA ribD2 782645 - 783730 + | bifunctional 5-amino-6-(5-phosphoribosylamino)uracil reductase/diaminohydroxyphosphoribosylaminopyrimidine deaminase TERM 1116 783736 - 783762 + F 76 -8.7 -3.83324 | opp_overlap 783732 783737, overlap 783737 783739 AATCCAATAAATAGA AGACCTTGTGC ATCGA GCGCAAGGTCC TTTCAATATTTCTAA TERM 1117 783761 - 783737 - f 83 -10 -3.97444 | opp_overlap 783736 783737 783739, overlap 783732 ATCCAATAAATAGAA GACCTTGTGC ATCGA GCGCAAGGTC CTTTCAATATTTCTA TERM 1118 783737 - 783761 + F 87 -12.2 -2.89271 | opp_overlap 783737 783732, overlap 783736 783739 ATCCAATAAATAGAA GACCTTGTGC ATCGA GCGCAAGGTC CTTTCAATATTTCTA TERM 1119 785297 - 785283 - f 90 -12.8 -2.88579 | GTAACGGGTGATACA GGCGCC ACC GGCGCC ACGGGTACAGGAGTG TERM 1120 785402 - 785388 - f 90 -12.8 -2.88579 | GTAACGGGTGATACA GGCGCC ACC GGCGCC ACGGGTACAGGAGCA TERM 1121 786273 - 786287 + G 74 -10 -3.20747 | overlap 786264 GTTGCGGGCGGTCTC GCTGGA ACA TCCAGC TTGATCGGATTTGGT BPUM_0706 786048 - 786719 + | hypothetical protein TERM 1122 786731 - 786754 + F 100 -11.8 -5.80951 | opp_overlap 786729 GTAATGAACACATTC GGATGACTCA ATCA TGAGTCGTCC TTTTTTGTTTTGAAT TERM 1123 788421 - 788407 - g 78 -5.6 -4.90266 | opp_overlap 788407 788409 GTGACGAACCAAAAA GAAGGC GGT GCCATC TTCACTGCATACATA citS 786826 - 788460 + | sensor histidine kinase TERM 1124 788855 - 788873 + G 84 -6.1 -5.04249 | opp_overlap 788854 788855 788859 ATTCCAAGGATGAAG TCAATCA AACGA TGATTGA TTTGTTTTTTGGACA citT 788461 - 789162 + | response regulator TERM 1125 789364 - 789351 - g 73 -3.8 -4.99043 | GCTTGAGAAAGAAAA GCTG GTGAAG CAGC CGGTGAATATCCTTT yflP 789166 - 790146 + | TTT family tricarboxylate membrane protein TERM 1126 790135 - 790152 + F 85 -4.8 -5.52986 | opp_overlap 790135 ATCCAAGGAGAACAA GCGGTT GAGTGA GACCGC TTTTTTTCATGGAAT TERM 1127 790804 - 790854 + G 70 -3.7 -4.86731 | overlap 790806 790808 TGAATACGATTCCAT GGGGAGGAGCCACACCTAGAGCG GCAAG TGCACTTGGCGTGGATCCATCAC TTTTATTTGGCCCGA citM 790338 - 791636 + | CitMHS family citrate-magnesium (Mg2+):citrate symporter TERM 1128 791669 - 791643 - f 74 -5.1 -4.87133 | opp_overlap 791645, overlap 791645 ATTTGGTAAATAAAA GAGTGTCTGCT ACCTG AGCAGGCACTT TTTTTAGGTCATATT TERM 1129 791645 - 791667 + F 100 -9.9 -5.48825 | opp_overlap 791643 791645 TTGGTAAATAAAAGA GTGTCTGCT ACCTG AGCAGGCAC TTTTTTTAGGTCATA TERM 1130 791667 - 791645 - f 75 -7.7 -4.05678 | opp_overlap 791645, overlap 791643 TTGGTAAATAAAAGA GTGTCTGCT ACCTG AGCAGGCAC TTTTTTTAGGTCATA TERM 1131 792023 - 792009 - g 81 -4.2 -5.26316 | overlap 792012 GCATTTCAGAAAAAA GGAGAA GCC TTCACC ACGCAAGAAGAGCTT TERM 1132 792186 - 792173 - g 77 -4.5 -5.03314 | TCCACTTTCAAAAAA GCCAA CGAT CTGGC TTCAAGCACAAATAC BPUM_0711 791817 - 793448 + | M14 family carboxypeptidase TERM 1133 793479 - 793453 - T 100 -7.4 -5.68438 | opp_overlap 793453 GCATTAAATAAAAAA GAGCTAAAATCA ACA TCATTTTAGCCC TTTGTCTACAATTTA TERM 1134 793516 - 793498 - T 73 -6.6 -4.3208 | opp_overlap 793498 GTCTACAATTTAAAA GCGGCACA GTG CGTGCTGC TTTTTTATTTTCGTC TERM 1135 793498 - 793516 + T 100 -8.1 -5.83211 | opp_overlap 793498 GTCTACAATTTAAAA GCGGCAC AGTGC GTGCTGC TTTTTTATTTTCGTC padC 794006 - 793521 - | phenolic acid decarboxylase padR 794119 - 794676 + | transcriptional regulator TERM 1136 795069 - 795047 - g 76 -9.2 -3.56668 | opp_overlap 795046 795044 795049, overlap 795045 GAAGACAGAAGAAGA GGTGAAAGAG GCA CTCTTTCATC ATATTGAGTATGCGA TERM 1137 795049 - 795067 + G 75 -10.4 -2.76964 | opp_overlap 795047 795045, overlap 795046 795044 AGACAGAAGAAGAGG TGAAAGAG GCA CTCTTTCA TCATATTGAGTATGC nos 794781 - 795887 + | nitric oxide synthase TERM 1138 795899 - 795882 - T 78 -5.5 -5.10767 | opp_overlap 795883, overlap 795883 CATGGAACAGAAAAA GCCTAGC GAAA GCTAGGT TTTTTGATTGTTGAC TERM 1139 795883 - 795898 + T 100 -9 -5.37865 | opp_overlap 795882 795883 ATGGAACAGAAAAAG CCTAGC GAAA GCTAGG TTTTTTGATTGTTGA TERM 1140 795898 - 795883 - T 74 -9 -3.65375 | opp_overlap 795883, overlap 795882 ATGGAACAGAAAAAG CCTAGC GAAA GCTAGG TTTTTTGATTGTTGA TERM 1141 795905 - 795957 + T 81 -3.5 -5.52384 | opp_overlap 795918, overlap 795909 795912 AAAGCTAGGTTTTTT GATTGTTGACAAAGTGCTAAAATGA TCT TGATTTTAGCACTTTGTCTTCTTTG TTTTTTTGATGAAAG TERM 1142 795909 - 795953 + T 100 -13.1 -5.23943 | opp_overlap 795918, overlap 795905 795912 CTAGGTTTTTTGATT GTTGACAAAGTGCTAAAATGA TCT TGATTTTAGCACTTTGTCTTC TTTGTTTTTTTGATG TERM 1143 795912 - 795950 + T 100 -17.8 -4.65305 | opp_overlap 795918, overlap 795909 795905 GGTTTTTTGATTGTT GACAAAGTGCTAAAATGA TCT TGATTTTAGCACTTTGTC TTCTTTGTTTTTTTG TERM 1144 795944 - 795918 - T 79 -9.6 -3.86897 | opp_overlap 795912 795909 795905 TTGATTGTTGACAAA GTGCTAAAATGA TCT TGATTTTAGCAC TTTGTCTTCTTTGTT BPUM_0715 796282 - 795974 - | acylphosphatase yflK 796361 - 797020 + | hypothetical protein TERM 1145 797052 - 797026 - T 89 -6.6 -5.47218 | opp_overlap 797027, overlap 797027 GCCCATTTAAAAAAA GCCGTACATC AGTATAA GATGTACGGT TTTTTAGCGCTTATG TERM 1146 797051 - 797027 - T 83 -10.1 -3.87608 | opp_overlap 797027, overlap 797026 CCCATTTAAAAAAAG CCGTACATC AGTATAA GATGTACGG TTTTTTAGCGCTTAT TERM 1147 797027 - 797051 + T 93 -10.1 -5.06103 | opp_overlap 797027 797026 CCCATTTAAAAAAAG CCGTACATC AGTATAA GATGTACGG TTTTTTAGCGCTTAT BPUM_0717 797200 - 797063 - | hypothetical protein TERM 1148 797140 - 797156 + g 93 -10.9 -4.15577 | GCTTTCTTCCTTCAT GCTTGGT CAC ACCAAGC TTCTTTAATTCTTCG yflI 797496 - 797335 - | hypothetical protein TERM 1149 797525 - 797544 + r 72 -2.1 -5.34309 | CCTTTCGCATATCTT TGCCTAT TTTACC ACAGGCA TTTTTGTTTAGTCGT TERM 1150 797610 - 797589 - R 100 -8 -5.38497 | AGGGAAATGAAAAAA TCCCCTCC AATGAA GAAGGGGA TTAGCAGGCTTACAG yflG 798369 - 797620 - | methionine aminopeptidase TERM 1151 798489 - 798499 + H 73 -2.6 -5.252 | AGATAACTAGATGTG TATA TGA TATA TTTTTTATGAGCATC nagP 798551 - 799921 + | PTS family glucose/glucoside (glc) porter component IIBC TERM 1152 799927 - 799956 + T 100 -15.8 -5.67283 | opp_overlap 799927 ACGAGATTAAAAAAA GCGTACAGCCGG GTCAAA TCGGCTGTACGC TTTTTTGTTTGCGTT TERM 1153 799956 - 799927 - T 100 -15.1 -5.59357 | opp_overlap 799927 ACGAGATTAAAAAAA GCGTACAGCCG GGTCAAAT CGGCTGTACGC TTTTTTGTTTGCGTT BPUM_0721 800698 - 799940 - | hypothetical protein TERM 1154 800399 - 800384 - G 83 -9 -4.128 | ACTTGCATACATAAA TCCGCT ATAG AGCGGA ACCCCAAAGACTTTT TERM 1155 800870 - 800855 - H 80 -6.2 -5.03227 | opp_overlap 800855 AGATCATAAAGAAAA TGTGAA GAAA TTCACA TAAATTAAAGGGAGG BPUM_0722 800893 - 801396 + | hypothetical protein TERM 1156 801407 - 801432 + T 100 -11.9 -5.63517 | opp_overlap 801407 CATAATAAAGAAAAA GCATCCTCAGC TTTT GCTCAGGATGC TTTTTTATTTAGGAA TERM 1157 801432 - 801407 - T 100 -11.9 -5.50774 | opp_overlap 801407 CATAATAAAGAAAAA GCATCCTCAGC TTTT GCTCAGGATGC TTTTTTATTTAGGAA yjgB 802028 - 801441 - | hypothetical protein TERM 1158 802114 - 802086 - R 100 -16.1 -4.24002 | opp_overlap 802089 GGGCAAACGTGAAAA GAACCAGCTGATC AGA GATCGGCTGGTTC TTAAAATGAGTAAAT TERM 1159 802089 - 802111 + r 100 -14.2 -3.65522 | opp_overlap 802086 CAAACGTGAAAAGAA CCAGCTGATC AGA GATCGGCTGG TTCTTAAAATGAGTA yflE 804108 - 802129 - | sulfatase TERM 1160 803652 - 803672 + g 89 -10.5 -3.96337 | opp_overlap 803654, overlap 803655 ATTTTGACTTTTGAA CAGGTACAG TAG CTGTACTTG TTTGCTGCTTTTTCA TERM 1161 803655 - 803669 + g 77 -8.6 -4.07437 | opp_overlap 803654, overlap 803652 TTGACTTTTGAACAG GTACAG TAG CTGTAC TTGTTTGCTGCTTTT TERM 1162 803898 - 803910 + g 82 -3.3 -5.4505 | overlap 803897 803899 GAATCACAATGATAG CGGCA GGC TGCCA TTTTTTCTTGAACAA TERM 1163 804276 - 804260 - H 72 -5.2 -4.73108 | opp_overlap 804260, overlap 804254 GGTAGAAAACGAAAA TTTTCG CTCTT CGAAAA ACTTTTTGTGAAATT TERM 1164 805244 - 805260 + G 75 -5.1 -4.81212 | overlap 805246 TGCGAAAAGGAGTTC CGCAAAA CCT TTATGCG TTTTGTTCTGATGCG TERM 1165 805362 - 805346 - g 73 -5.9 -4.51174 | TGATCAGAATTAAAA CGAATAA AGA TCATTCG ATGGATATGGAAGAT TERM 1166 805413 - 805423 + G 82 -8.2 -4.27117 | TGTTGCACAGGGTGG CGGG ATT CCCG TTTATATTGTCGCAA TERM 1167 806163 - 806181 + G 73 -3.8 -4.93968 | AAGAGACGAAATGTT CTTTGGTG ATA CAACGAAG TTTTTACTTGTAAAT BPUM_0725 804688 - 806346 + | diaminobutyrate decarboxylase TERM 1168 806422 - 806396 - g 75 -7.4 -4.27211 | opp_overlap 806395 GCGAAACAAAGGAAA TTTGGAGGATAC ACG ATATCCTCTAAA ATCATGTCAGTCGTT TERM 1169 808007 - 807995 - g 70 -7.7 -3.71284 | opp_overlap 808002, overlap 808002 808003 GCGGCAGCAACAGAA CAGCA AAG TGCTG GCATGCAGCAAATTT BPUM_0726 806378 - 808102 + | sensor histidine kinase TERM 1170 808146 - 808100 - f 72 -6 -4.38114 | opp_overlap 808104 808110, overlap 808103 808104 808110 AAAATCGACAATAAA TAACGAGAAAGGGCTAAAATGA TCT TGATTTTAGCCCTTTGTCTTCT TTTCAGCGTGACATG TERM 1171 808143 - 808103 - f 86 -9.9 -4.28115 | opp_overlap 808104 808110, overlap 808100 808104 808110 ATCGACAATAAATAA CGAGAAAGGGCTAAAATGA TCT TGATTTTAGCCCTTTGTCT TCTTTTCAGCGTGAC TERM 1172 808104 - 808142 + F 100 -13.4 -4.18506 | opp_overlap 808103 808100 808104 808110, overlap 808110 TCGACAATAAATAAC GAGAAAGGGCTAAAATGA TCT TGATTTTAGCCCTTTGTC TTCTTTTCAGCGTGA TERM 1173 808142 - 808104 - f 95 -13.4 -3.15784 | opp_overlap 808104 808110, overlap 808103 808100 808110 TCGACAATAAATAAC GAGAAAGGGCTAAAATGA TCT TGATTTTAGCCCTTTGTC TTCTTTTCAGCGTGA TERM 1174 808110 - 808136 + F 90 -11 -4.45253 | opp_overlap 808104 808103 808100 808110, overlap 808104 ATAAATAACGAGAAA GGGCTAAAATGA TCT TGATTTTAGCCC TTTGTCTTCTTTTCA TERM 1175 808136 - 808110 - f 86 -11 -4.18441 | opp_overlap 808110 808104, overlap 808104 808103 808100 ATAAATAACGAGAAA GGGCTAAAATGA TCT TGATTTTAGCCC TTTGTCTTCTTTTCA TERM 1176 808274 - 808297 + F 100 -11.8 -5.2422 | TGTCTACACGCTGAA GCTGACTCTT GTGA GAGAGTCAGC TTTTTTGCTATGCTT BPUM_0727 808345 - 808731 + | hypothetical protein TERM 1177 809337 - 809327 - g 73 -5.4 -4.72272 | opp_overlap 809327 TTCTTTGATCAAAAA TCGA TTG TCGA TGTGTATCCGGCTTG TERM 1178 810023 - 810007 - g 70 -5.1 -4.49756 | TTTGAAAGATGAAAA GCAAAAG GGT CTCTCGC TCACATCAAGTATTT treP 808895 - 810331 + | PTS family trehalose porter component IIBC TERM 1179 811497 - 811483 - g 73 -8.6 -3.72324 | opp_overlap 811482 811480 GATTGGTATGAAGAA TCCTCA GTT TGAGGA CATCTTGTCTTACCG treA 810347 - 812047 + | alpha,alpha-phosphotrehalase treR 812067 - 812795 + | GntR family transcriptional regulator TERM 1180 812806 - 812781 - T 100 -7.5 -5.2015 | opp_overlap 812783, overlap 812782 812783 GCAAGAAGAGAAAAA GTGGACAGAGC ATAG GCTCTGTCCTT TTCAGGTTTTGGGAA TERM 1181 812805 - 812782 - T 83 -11 -3.70463 | opp_overlap 812783, overlap 812781 812783 CAAGAAGAGAAAAAG TGGACAGAGC ATAG GCTCTGTCCT TTTCAGGTTTTGGGA TERM 1182 812783 - 812804 + T 100 -14.5 -4.28049 | opp_overlap 812783 812782 812781 AAGAAGAGAAAAAGT GGACAGAGC ATAG GCTCTGTCC TTTTCAGGTTTTGGG TERM 1183 812804 - 812783 - T 95 -14.5 -2.80651 | opp_overlap 812783, overlap 812782 812781 AAGAAGAGAAAAAGT GGACAGAGC ATAG GCTCTGTCC TTTTCAGGTTTTGGG TERM 1184 813304 - 813337 + T 95 -12.5 -3.62275 | opp_overlap 813308, overlap 813293 813308 TTGATGTTTACCATG AAAAGAGGACAGAGC TTAG GCTCTGTCCTCTTCC TTTAGGATGATACAT TERM 1185 813333 - 813308 - T 100 -17.7 -4.30576 | opp_overlap 813304 813293 813308 TGTTTACCATGAAAA GAGGACAGAGC TTAG GCTCTGTCCTC TTCCTTTAGGATGAT TERM 1186 813308 - 813333 + T 100 -17.7 -3.53298 | opp_overlap 813308, overlap 813304 813293 TGTTTACCATGAAAA GAGGACAGAGC TTAG GCTCTGTCCTC TTCCTTTAGGATGAT yfkN 817565 - 813339 - | 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase bifunctional periplasmic precursor protein TERM 1187 814697 - 814682 - G 76 -7.6 -4.09685 | opp_overlap 814681 GTTGACCGTCTAAAA GGACAT CTGT ATGTCC GACTTTTTCTGTCTT TERM 1188 815227 - 815246 + g 87 -6.4 -5.09895 | GCTTCTTTTTTCTCA CCAGCTTT AAAT GAGGCTGG TTTTTTCACTAAGTC TERM 1189 817686 - 817700 + H 70 -2.9 -5.1361 | GTAGAAATGTTTCGT TAACT TTTGT AGTTA TTTTTTGAAGTTTAT yfkM 817883 - 818401 + | C56 family peptidase TERM 1190 818453 - 818429 - T 100 -8.5 -5.53079 | opp_overlap 818429 AAAAGATATAAAAAA GCCAGCACC TTTCGGG GGGGCTGGC TTTTTGTGTGCATGA TERM 1191 818429 - 818453 + T 93 -9.9 -4.99035 | opp_overlap 818429 AAAAGATATAAAAAA GCCAGCACCTT TCG GGGGGGCTGGC TTTTTGTGTGCATGA yfkK 818714 - 818499 - | hypothetical protein TERM 1192 818715 - 818727 + r 70 -6.9 -3.78736 | opp_overlap 818715 TTTTTGCTCTGACAA GGGCG GCA CGTCC TTTCCTGCATATGTG yflA 820147 - 818792 - | AGCS family alanine or glycine:sodium (Na+) or proton (H+) symporter TERM 1193 819852 - 819839 - G 71 -4.5 -4.59773 | GGCCATCCCGAAAAA TGCGG CAAA CCACA TCCAGAATACTGCAC TERM 1194 820100 - 820090 - G 71 -8.2 -3.45152 | overlap 820088 CAATCAAAATCAACA GGGG AGG CCCC CACAAAAAATTGTTC yfkJ 820322 - 820792 + | protein-tyrosine-phosphatase yfkI 820813 - 821145 + | hypothetical protein TERM 1195 821179 - 821193 + G 78 -5.7 -4.7497 | opp_overlap 821179, overlap 821168 ATGGGTTTTATTAAA GCGTT AATTG AACGC TTTTTGCTACATGAA yfkH 821164 - 821982 + | hypothetical protein TERM 1196 822105 - 822095 - T 73 -4.6 -4.98352 | ACGAAACAAAACAAA GGCC ATC AGCC TAAGCACAAAACAAG TERM 1197 822190 - 822163 - T 91 -8.4 -5.01811 | opp_overlap 822165, overlap 822165 TCACTAAATGAAAAA GACTCCTCTGCA TAGG TGCAGGGGAGTT TTTATTTAGAAATGG TERM 1198 822165 - 822188 + T 100 -13.2 -5.27938 | opp_overlap 822163 822165 ACTAAATGAAAAAGA CTCCTCTGCA TAGG TGCAGGGGAG TTTTTATTTAGAAAT TERM 1199 822188 - 822165 - T 86 -11 -4.12375 | opp_overlap 822165, overlap 822163 ACTAAATGAAAAAGA CTCCTCTGCA TAGG TGCAGGGGAG TTTTTATTTAGAAAT yfkF 823373 - 822192 - | major facilitator transporter BPUM_0740 823449 - 823826 + | hypothetical protein TERM 1200 824159 - 824133 - g 70 -8.1 -3.72576 | gap 1, opp_overlap 824132 824129 GTTTTTTGCATTAAA GCAAGGACTGAC AGCC ATC-GTCCTTGC ATCATTAACTGGCTC yfkE 823891 - 824955 + | Ca2+ antiporter TERM 1201 825043 - 825031 - g 91 -7.7 -4.82667 | opp_overlap 825030 825031 TGATGATATGAAAAA GATGC CCC GCATC ATGTTTGTTGTTCTC TERM 1202 825275 - 825258 - g 72 -6.3 -4.26903 | opp_overlap 825258 CCCATTTGATCAAAA TGCTGAA TGAA TCCAGCA TTTCAGGGACGCCAT TERM 1203 825397 - 825383 - g 80 -2.8 -5.47159 | TGGGAATACAAAAAA GTGAAT ACG AATCAC ATTGATAACAGAGGT yfkD 825023 - 825805 + | sporulation protein YfkD TERM 1204 825810 - 825844 + T 87 -12.2 -2.98219 | opp_overlap 825806 825810 825814, overlap 825814 GGATGAATTAACATA GTAACCCCCTCTTTCA CTA TAGAAGAGGGGGTTTC ATTTGTCGTAAAGTT TERM 1205 825844 - 825810 - T 87 -12.2 -3.19824 | opp_overlap 825810 825814, overlap 825806 825814 GGATGAATTAACATA GTAACCCCCTCTTTCA CTA TAGAAGAGGGGGTTTC ATTTGTCGTAAAGTT TERM 1206 825840 - 825814 - T 85 -11.6 -3.40022 | opp_overlap 825810 825814, overlap 825810 825806 GAATTAACATAGTAA CCCCCTCTTTCA CTA TAGAAGAGGGGG TTTCATTTGTCGTAA TERM 1207 825814 - 825840 + T 90 -11.6 -4.16182 | opp_overlap 825814 825810 825806, overlap 825810 GAATTAACATAGTAA CCCCCTCTTTCA CTA TAGAAGAGGGGG TTTCATTTGTCGTAA TERM 1208 826306 - 826267 - T 100 -21.2 -5.63517 | opp_overlap 826263 826274 826279 GTTTTAAATAAAAAA GCCATAACATAAGTTTAT TTAA ATAAACTTATGTTATGGC AAAATTCCCTTTTAT TERM 1209 826274 - 826299 + T 79 -10.7 -3.30159 | opp_overlap 826267, overlap 826263 826279 ATAAAAAAGCCATAA CATAAGTTTAT TTAA ATAAACTTATG TTATGGCAAAATTCC yeeI 827037 - 826318 - | hypothetical protein TERM 1210 826988 - 827001 + g 86 -6.7 -4.98352 | ATACGACTTGTACTG GCATC CTTT GATGC TTTCTTTTCTTTAAT BPUM_0744 827570 - 827169 - | hypothetical protein TERM 1211 827675 - 827653 - R 100 -7.8 -6.00814 | opp_overlap 827653 827656 AACAATCAAAAAAAA TAACCCCATC ATA AATGAGGTTA TTTTGCAGGCTGGGG BPUM_0745 828509 - 827673 - | MscS family small conductance mechanosenstive ion channel protein yfkA 829638 - 828517 - | thioredoxin TERM 1212 828867 - 828857 - G 89 -6.8 -5.29445 | CTGCAAGAATAAAAA GGCA AGG TGCC AAACAGCATCCATGT yfjT 829785 - 829976 + | hypothetical protein TERM 1213 829968 - 830000 + F 81 -9.9 -3.75332 | opp_overlap 829974 829976, overlap 829976 AAAAATGATTGGAAG GAAGAATAGCTCGCG CGG TGCGGGCTTTTTTTC TTTAAATTGGCAGGT TERM 1214 829976 - 829992 + F 100 -7.9 -5.96894 | opp_overlap 829974 829976, overlap 829968 TTGGAAGGAAGAATA GCTCGCG CGG TGCGGGC TTTTTTTCTTTAAAT TERM 1215 830524 - 830504 - g 80 -9.7 -3.67482 | overlap 830502 AGAAATCAAAGAAGA GCTTCAGCG TGT CGATGAAGC CGTGTACAAAATCAC yfjS 830079 - 830870 + | poylsaccharide deacetylase TERM 1216 830868 - 830908 + T 81 -11.4 -2.83642 | opp_overlap 830878, overlap 830878 CATCTGCCTCAGCTA TAGAAAAAAAGCTTGCAG AACAC CTGCGAGCTTTTTCTTTA TCCTTCCCTTATTTT TERM 1217 830898 - 830878 - T 100 -7.5 -5.72616 | opp_overlap 830868 830878 AGCTATAGAAAAAAA GCTTGCAGA ACA CCTGCGAGC TTTTTCTTTATCCTT TERM 1218 830878 - 830898 + T 100 -9 -5.4182 | opp_overlap 830878, overlap 830868 AGCTATAGAAAAAAA GCTTGCAG AACAC CTGCGAGC TTTTTCTTTATCCTT BPUM_0749 831397 - 830906 - | hypothetical protein corA 832389 - 831430 - | MIT family metal ion transporter CorA TERM 1219 831494 - 831474 - G 73 -5.3 -4.61566 | overlap 831477 GCTTAAACCACAAAA GCATGCCCG AGA CGAGCAGAC CCATGAAAATCAGTA TERM 1220 832485 - 832462 - R 93 -7.4 -5.60993 | overlap 832463 TTCTCCATAAAAAAA GCCGACCTCA TCCC TGAGATCGGT CCAATGTGCGTGTAT TERM 1221 832484 - 832463 - R 86 -10.9 -3.95873 | overlap 832462 TCTCCATAAAAAAAG CCGACCTCA TCCC TGAGATCGG TCCAATGTGCGTGTA BPUM_0751 833035 - 832523 - | hypothetical protein TERM 1222 833160 - 833147 - H 71 -3.9 -4.88163 | GCAAGATAAAACAAA TGATT GCCT AATCA GCTAATTCGTTTGTT alkA 833336 - 834337 + | DNA-3-methyladenine glycosylase II TERM 1223 834985 - 834974 - g 81 -4.4 -5.3167 | overlap 834977 CAAAAACAAACAAAA CAAC GGGC GTTG TCCGCAAAATTTTAG TERM 1224 834989 - 834977 - g 71 -4.7 -4.64595 | overlap 834974 AAACAAACAAAACAA CGGGC GTT GTCCG CAAAATTTTAGAGAA trmA 834436 - 835821 + | tRNA (uracil-5-)-methyltransferase TERM 1225 835863 - 835833 - f 78 -9.8 -3.37053 | opp_overlap 835833 ATAGACTTTAATCAA GGCTTGAAAATCAA TAT TAGATTTTCGAGCC TTTTTTTGTGGACAT TERM 1226 835833 - 835863 + F 100 -12 -5.61596 | opp_overlap 835833 ATAGACTTTAATCAA GGCTTGAAAATCAA TAT TAGATTTTCGAGCC TTTTTTTGTGGACAT BPUM_0754 835953 - 836537 + | TetR family transcriptional regulator TERM 1227 836527 - 836544 + F 95 -5.6 -5.78622 | ATCATATGTTTAACT TGCTTC GATAAA GAAGCA TTTTTTTTACACTAA TERM 1228 836580 - 836561 - f 72 -8 -3.83026 | TTTTTTTACACTAAA TTAGTACT AAAT AGTACTAA AAAGGAGACTTCATA BPUM_0755 836595 - 838481 + | bifunctional nucleotide sugar epimerase/hydrolase BPUM_0756 838554 - 838985 + | hypothetical protein BPUM_0757 838975 - 839487 + | hypothetical protein TERM 1229 839502 - 839524 + F 86 -5.6 -5.51165 | opp_overlap 839502 GAATAATGAGCAAAA CCTAGATGTT AGA GAAATCTAGG TTTTTTTGCGCTTTT BPUM_0758 839627 - 840454 + | transcriptional regulator TERM 1230 840641 - 840658 + G 71 -9.9 -2.73364 | opp_overlap 840644, overlap 840644 TAGCGCTCTCAGCAG CAATCGG TGCA CCGATTG TCATTGCACTGACCA ybcL 840481 - 841668 + | major facilitator transporter BPUM_0760 841924 - 843108 + | hypothetical protein TERM 1231 843390 - 843420 + F 100 -11.2 -5.626 | overlap 843383 TGGAACCACGGATCA CACATTCGTCCCTT TAT GAGGGATGGGTGTG TTTTTTTGTACACTC TERM 1232 843652 - 843682 + F 100 -9 -6.20267 | overlap 843645 TGGAACCACGGATTA CACATTCGTCCCTT TAC ACGGGATGGGTGTG TTTTTTTATTTTTAA thrZ 843710 - 845641 + | threonyl-tRNA synthetase TERM 1233 845668 - 845691 + F 74 -6 -4.54727 | CATGAAGAAGAATAA GACGTTCATT AAAT GATGGGCGTC TTTTCATTTGCGAAA BPUM_0762 845680 - 845835 + | hypothetical protein BPUM_0763 845817 - 846383 + | hypothetical protein TERM 1234 846834 - 846812 - g 78 -10.6 -3.34089 | overlap 846810 846815 TTTGAAGAAGCAATA GATGGTGTGA AAG TCACACCTTC AGGCAGAATCGAAGT TERM 1235 846831 - 846815 - g 76 -10.9 -2.53228 | overlap 846812 846810 GAAGAAGCAATAGAT GGTGTGA AAG TCACACC TTCAGGCAGAATCGA BPUM_0764 846410 - 847687 + | hypothetical protein TERM 1236 847679 - 847697 + F 78 -3.1 -5.42131 | GTGTTTTCTTTGAAA GAGCAGT GAGGA GCTGTTC TTTTTTGTCTCATTG BPUM_0765 848010 - 848282 + | hypothetical protein TERM 1237 848293 - 848316 + T 100 -11.8 -5.53991 | gap 1, opp_overlap 848293 ATTAATACAGAAAAA GCTGCTTGAGG GCT CCTCA-GCAGC TTTTTTTGGTGAATC TERM 1238 848316 - 848293 - T 100 -11.8 -5.10968 | gap 1, opp_overlap 848293 ATTAATACAGAAAAA GCTGCTTGAGG GCT CCTCA-GCAGC TTTTTTTGGTGAATC BPUM_0766 849840 - 848332 - | transcriptional regulator TERM 1239 849319 - 849299 - G 70 -2.5 -5.00884 | AGCTTTTGTAAAAAA TCAACTGCA TCT TGCTTTTGA ATATCATCGAATGGC TERM 1240 850257 - 850278 + H 70 -5.9 -4.21885 | opp_overlap 850259, overlap 850253 850251 850250 CGAACCATATGTGAA TACATGCTT ATAT ATGCATGTA TTTATAATTTATTGT TERM 1241 854857 - 854844 - g 71 -6.7 -4.17023 | TCAATGATCTCAAAA CTGGA GCTG TCCAG CTCACGAAGCTCGGT TERM 1242 854964 - 854940 - g 73 -2.7 -5.186 | overlap 854942 GAAAAGAGATAAAAA CAGGTCTCGTC ACA GATGAGAACGG GAAGATCATCATCAA TERM 1243 855816 - 855796 - g 73 -2.5 -5.1104 | overlap 855797 855807 AAAGACAGACAAAAA CGGTCAACT GAC AGTCGATCA ACTGAAGCCAGGAAC TERM 1244 856341 - 856328 - g 73 -5.3 -4.67635 | GGGAAAACCATAAAA TCTGT GACA ACAGA AGAAGACGGAGAAGC BPUM_0767 850553 - 856696 + | collagen adhesion protein BPUM_0769 856718 - 857320 + | C60A subfamily peptidase TERM 1245 857501 - 857486 - g 71 -3.2 -4.94262 | overlap 857488 TATATTAAAAAGAAA GCTACC AATT GGTATC GAAAAATTCACCTGT BPUM_0770 857313 - 857639 + | hypothetical protein TERM 1246 857640 - 857692 + T 78 -10.1 -3.3164 | opp_overlap 857632 857641 857644 857655, overlap 857641 857655 CAGGATACCCATTGA ATGAGAAACAAAAAAGGAAGGGGCT TTG ACTCCCTTCCTTTTTTGTTATTTAA TTATGCAAATAACTT TERM 1247 857641 - 857691 + T 91 -13.6 -2.58663 | opp_overlap 857632 857641 857644 857655, overlap 857640 857655 AGGATACCCATTGAA TGAGAAACAAAAAAGGAAGGGGCT TTG ACTCCCTTCCTTTTTTGTTATTTA ATTATGCAAATAACT TERM 1248 857677 - 857655 - T 100 -6.3 -5.73978 | gap 1, opp_overlap 857641 857640 857655, overlap 857644 857641 ATGAGAAACAAAAAA GGAAGGG-GC TTTG ACTCCCTTCC TTTTTTGTTATTTAA TERM 1249 857655 - 857677 + T 100 -8.4 -5.72254 | opp_overlap 857655 857644 857641, overlap 857641 857640 ATGAGAAACAAAAAA GGAAGGGGCT TTG ACTCCCTTCC TTTTTTGTTATTTAA BPUM_0771 858007 - 857693 - | DMT superfamily drug/metabolite transporter BPUM_0772 858352 - 858008 - | DMT superfamily drug/metabolite transporter TERM 1250 858378 - 858390 + r 75 -7.7 -4.07568 | opp_overlap 858378 858377 CCTAAAACTTAAAAC TGACG ATT CGTCA TTTTGAAACCAAAAA TERM 1251 858411 - 858428 + r 73 -9.9 -2.54702 | opp_overlap 858410 858409 AAACCAAAAAAGAGC GTACAGC AAGT GCTGTAC TAAGTTAAGATGTCT BPUM_0773 859158 - 858433 - | transcriptional regulator TERM 1252 859030 - 859046 + g 71 -9.5 -3.01905 | opp_overlap 859030, overlap 859029 ATCACCGACCTTAAA TGACTGA ATG TCAGTCA GTTTATCTAAAAAAT TERM 1253 859046 - 859030 - G 78 -9.5 -3.61356 | opp_overlap 859029 859030 ATCACCGACCTTAAA TGACTGA ATG TCAGTCA GTTTATCTAAAAAAT TERM 1254 859073 - 859061 - G 75 -3.4 -5.09225 | AGTTTATCTAAAAAA TGAC GATTT GTCA ATATGGGTTTCTCGT TERM 1255 859543 - 859568 + G 74 -4.7 -4.8048 | opp_overlap 859538, overlap 859542 CATTCAGAACCTTGC GCTGGCAAAAA GCGA TTCTTGCTGGC TTTTTCATATCAACA vanZ 859185 - 859733 + | teicoplanin resistance protein VanZ yfjM 859730 - 860194 + | hypothetical protein yesY 860345 - 860974 + | rhamnogalacturan acetylesterase TERM 1256 860980 - 861008 + F 100 -9.7 -5.40072 | gap 1, opp_overlap 860984, overlap 860982 GATTGTGTGATGGAT GA-CAGGACGAG AAAGCG CTCGTCCTGTTC TTTTTTTGCAGAAAG TERM 1257 860982 - 861005 + F 100 -12.5 -4.79949 | opp_overlap 860984, overlap 860980 TTGTGTGATGGATGA CAGGACGAG AAAGCG CTCGTCCTG TTCTTTTTTTGCAGA TERM 1258 861003 - 860984 - f 72 -9.3 -2.80816 | opp_overlap 860982 860980 GTGTGATGGATGACA GGACGAG AAAGCG CTCGTCC TGTTCTTTTTTTGCA TERM 1259 861411 - 861393 - g 84 -5.3 -5.28481 | CACTGAATCAAAAAA TCACGTC ATTCG AACGTGA TGAACATCAGAACAT ycgT 861128 - 862168 + | thioredoxin-disulfide reductase TERM 1260 862225 - 862173 - T 83 -7.4 -5.00616 | gap 2, opp_overlap 862187, overlap 862176 862187 GTGCTCGTTAAAAAA TAATCTCATA-AAAA-GTGCTGCC CATATGT GGCAGCACTTTTTATATGAGGCTA TGAATGGCGAGGTGC TERM 1261 862220 - 862176 - T 100 -15.3 -4.61482 | opp_overlap 862187, overlap 862173 862187 CTCGTTAAAAAATAA TCTCATAAAAAGTGCTGCC CATATGT GGCAGCACTTTTTATATGA GGCTATGAATGGCGA TERM 1262 862209 - 862187 - T 93 -10.6 -4.88388 | opp_overlap 862187, overlap 862176 862173 ATAATCTCATAAAAA GTGCTGCC CATATGT GGCAGCAC TTTTTATATGAGGCT TERM 1263 862187 - 862209 + T 93 -10.6 -4.9725 | opp_overlap 862176 862173 862187 ATAATCTCATAAAAA GTGCTGCC CATATGT GGCAGCAC TTTTTATATGAGGCT BPUM_0779 862809 - 862576 - | hypothetical protein BPUM_0780 862909 - 863475 + | DNA-directed RNA polymerase sigma subunit BPUM_0781 863472 - 864218 + | hypothetical protein TERM 1264 864233 - 864252 + F 86 -10 -4.24123 | overlap 864229 AATATGATTCAGGTA GGATGCCT TTTT GGGCATCC TTTTCAGATTGTTGA TERM 1265 864266 - 864304 + F 100 -21.4 -4.18506 | opp_overlap 864272, overlap 864272 CCTTTTCAGATTGTT GACAAAGGGCTAAAATGA TCT TTATTTTAGCCCTTTGTC TTCTTTTCAGCGTGA TERM 1266 864272 - 864298 + F 100 -13.2 -4.45253 | opp_overlap 864272, overlap 864266 CAGATTGTTGACAAA GGGCTAAAATGA TCT TTATTTTAGCCC TTTGTCTTCTTTTCA TERM 1267 864298 - 864272 - f 86 -11 -3.87373 | opp_overlap 864266 864272 CAGATTGTTGACAAA GGGCTAAAATGA TCT TTATTTTAGCCC TTTGTCTTCTTTTCA TERM 1268 864753 - 864766 + G 73 -5.3 -4.62069 | CAAAGGCTTGAACAG CTGAT GATG ATCAG TTTTGTGGTGTTTTT BPUM_0782 864414 - 864989 + | hypothetical protein BPUM_0783 865078 - 866103 + | NADPH:quinone reductase yfiT 866100 - 866627 + | metal-dependent hydrolase BPUM_0785 866640 - 866930 + | hypothetical protein TERM 1269 866935 - 866915 - T 78 -3.3 -5.39221 | gap 1, opp_overlap 866915 AGAAGAACTAAAAAA GACGGATC TCAAGT GA-CCGTC TTTTTTTCTTTACAT TERM 1270 866915 - 866935 + T 91 -3.3 -5.96894 | gap 1, opp_overlap 866915 AGAAGAACTAAAAAA GACGGATC TCAAGT GA-CCGTC TTTTTTTCTTTACAT yfiV 867432 - 866953 - | transcriptional regulator TERM 1271 867381 - 867393 + g 72 -6.3 -4.25658 | TCTTTTTTTCCTCTG GAGAT AGA ATCTC TTCTTTTAATACGGT TERM 1272 869579 - 869548 - g 87 -5.2 -5.4505 | TCCGGTAAGAAAAAA TCAAATTTACGGGC TGTG GCCAATAAGTTTGA ACGAGAAGGCTATAC TERM 1273 869693 - 869680 - g 89 -3.9 -5.63517 | CTCGGAAAGAAAAAA GAAAA AGGA TTTTC GCTCGGCTATTTTCA BPUM_0787 867601 - 870171 + | hypothetical protein TERM 1274 870203 - 870180 - f 74 -5.3 -4.84527 | opp_overlap 870180 TCCATAGATCAAAAA CCTTTACCT TTCACT AGGTGAAGG TTTTTTTAGACAAAA TERM 1275 870180 - 870203 + F 100 -7.5 -5.40072 | opp_overlap 870180 TCCATAGATCAAAAA CCTTTACCT TTCACT AGGTGAAGG TTTTTTTAGACAAAA TERM 1276 870425 - 870415 - g 78 -2.4 -5.45802 | opp_overlap 870415 GTTGCAAAAGAAAAA GCTC AGA GCGC TTGTCATTACAGCGG BPUM_0788 870263 - 870811 + | hypothetical protein TERM 1277 870856 - 870807 - f 79 -6.2 -5.01732 | gap 3, opp_overlap 870819, overlap 870814 870819 AAGTTTTGGAAAAAA TATAAACCAAAAGACTACTTCGCCG CAA CGG-GAAGTAGTCTTTT--TTTATC TTGTTTTTGCGTCTC TERM 1278 870851 - 870814 - f 100 -13.7 -3.37368 | gap 1, opp_overlap 870819, overlap 870807 870819 GGAAAAAATATAAAC CAAAAGACTACTTCGCCG CAA CGG-GAAGTAGTCTTTTT TTATCTTGTTTTTGC TERM 1279 870846 - 870819 - f 100 -13.6 -4.68919 | gap 1, opp_overlap 870819, overlap 870814 870807 AAATATAAACCAAAA GACTACTTCGCCG CAA CGG-GAAGTAGTC TTTTTTTATCTTGTT TERM 1280 870819 - 870846 + F 100 -13.6 -5.86465 | gap 1, opp_overlap 870814 870807 870819 AAATATAAACCAAAA GACTACTTCGCCG CAA CGG-GAAGTAGTC TTTTTTTATCTTGTT BPUM_0789 871148 - 871615 + | hypothetical protein TERM 1281 871662 - 871623 - T 90 -12.4 -3.82604 | opp_overlap 871628, overlap 871628 CCATTTAATGAATAA GAAAAGCATGACCTTC GATCGGCA GAAGGTCATGCTTTTT TGTAATAGGGGACGT TERM 1282 871628 - 871657 + T 100 -12.3 -5.31275 | opp_overlap 871628 871623 TAATGAATAAGAAAA GCATGACCTTC GATCGGCA GAAGGTCATGC TTTTTTGTAATAGGG TERM 1283 871657 - 871628 - T 100 -12.3 -4.95167 | opp_overlap 871628, overlap 871623 TAATGAATAAGAAAA GCATGACCTTC GATCGGCA GAAGGTCATGC TTTTTTGTAATAGGG BPUM_0790 872908 - 871652 - | transcriptional activator yfhC 873180 - 873767 + | nitroreductase family protein TERM 1284 873805 - 873775 - Tf 100 -8.4 -5.34857 | opp_overlap 873780, overlap 873780 TTAAATAAAAGAAAA GAAAAGCAGACC GCTAGAG GGTCTGCTTTTA GATTGTTGACAAAGG TERM 1285 873780 - 873800 + TF 82 -8.3 -4.36127 | opp_overlap 873780 873775 TAAAAGAAAAGAAAA GCAGACC GCTAGAG GGTCTGC TTTTAGATTGTTGAC TERM 1286 873800 - 873780 - Tf 100 -8.3 -5.40279 | opp_overlap 873780, overlap 873775 TAAAAGAAAAGAAAA GCAGACC GCTAGAG GGTCTGC TTTTAGATTGTTGAC TERM 1287 873810 - 873854 + TF 100 -18.9 -4.59773 | opp_overlap 873819, overlap 873813 GTCTGCTTTTAGATT GTTGACAAAGGACTAAAATGA TCT TCATTTTAGTCCTTTGTCTTC TTTTTCAGCGTGACC TERM 1288 873813 - 873851 + TF 100 -23.6 -4.41633 | opp_overlap 873819, overlap 873810 TGCTTTTAGATTGTT GACAAAGGACTAAAATGA TCT TCATTTTAGTCCTTTGTC TTCTTTTTCAGCGTG TERM 1289 873845 - 873819 - Tf 100 -15.4 -3.87373 | opp_overlap 873813 873810 TAGATTGTTGACAAA GGACTAAAATGA TCT TCATTTTAGTCC TTTGTCTTCTTTTTC TERM 1290 873983 - 874003 + TF 100 -8.3 -5.71638 | opp_overlap 873986 TGTCTACACGCTGAA GCAGACC GCTGTAG GGTCTGC TTTTTTTACTTATTG yfhD 874168 - 874013 - | sporulation protein YfhD TERM 1291 874212 - 874232 + Gr 77 -4.7 -5.00234 | overlap 874216 TAGTTATGTGCTTGT TGAAGTGGA ATA TCCACCTTA TTTGTTTCTTTTTTC BPUM_0793 874123 - 874281 + | hypothetical protein yfhF 875289 - 874393 - | nucleoside diphosphate sugar epimerase TERM 1292 875273 - 875261 - G 72 -6.2 -4.36914 | opp_overlap 875252 TGCTGGCCGATAAAA CCGG TTCCT CCGG TGATGGCGATATTCA TERM 1293 875794 - 875783 - g 82 -5.8 -5.00616 | TCCGTTCTGAAAAAA GAGC TAAA GCTC AAAGGAATAGAGGAT recX 875384 - 876175 + | recombination regulator RecX yfhH 876179 - 876493 + | hypothetical protein TERM 1294 876482 - 876514 + T 95 -12.2 -3.90856 | opp_overlap 876487, overlap 876487 ATTTCAATGCTGACG AAAAAGGACTGATC CGAGA GATCAGTCCTTTTC TTTACTTCGAACGTT TERM 1295 876487 - 876509 + T 100 -12.1 -4.99947 | opp_overlap 876487, overlap 876482 AATGCTGACGAAAAA GGACTGATC CGAGA GATCAGTCC TTTTCTTTACTTCGA TERM 1296 876509 - 876487 - T 100 -12.8 -4.73388 | opp_overlap 876482 876487 AATGCTGACGAAAAA GGACTGATCC GAG AGATCAGTCC TTTTCTTTACTTCGA BPUM_0797 876689 - 876516 - | hypothetical protein sspK 876864 - 876715 - | acid-soluble spore protein K yfhJ 876981 - 877253 + | hypothetical protein TERM 1297 877330 - 877351 + F 74 -5.9 -4.64598 | ATGATGCAATACCCA GTCTGTGAT CGAA ATTACAGGC TTTTTACAATGGTTA csbB 877544 - 878527 + | stress response protein TERM 1298 878540 - 878571 + F 71 -3.8 -4.86731 | gap 1, opp_overlap 878543, overlap 878542 878543 TAACGTGGAGTCAAA TAA-CCGGCAAGC ACGTATC GCTTGCTGGGTTG TTTTGTTTCAAAGAA TERM 1299 878542 - 878568 + F 74 -5.8 -4.54026 | opp_overlap 878543, overlap 878540 878543 ACGTGGAGTCAAATA ACCGGCAAGC ACGTATC GCTTGCTGGG TTGTTTTGTTTCAAA TERM 1300 878543 - 878567 + F 75 -9.3 -3.31331 | opp_overlap 878543, overlap 878542 878540 CGTGGAGTCAAATAA CCGGCAAGC ACGTATC GCTTGCTGG GTTGTTTTGTTTCAA TERM 1301 878567 - 878543 - f 74 -7.8 -3.96216 | opp_overlap 878543 878542 878540 CGTGGAGTCAAATAA CCGGCAAGCA CGTAT CGCTTGCTGG GTTGTTTTGTTTCAA TERM 1302 880906 - 880889 - g 91 -5.5 -5.65496 | TATGAAAAAGAAAAA CTGGATG ATGG CAGCCAG CAGGTGAAACTTAAA yfhO 878615 - 881209 + | hypothetical protein TERM 1303 881192 - 881215 + T 100 -8.2 -6.25578 | opp_overlap 881192 AGAAAACACAAGAAA CACCACTTTT CAGC ATAAGTGGTG TTTTTTTTCTTTCAT TERM 1304 881215 - 881192 - T 86 -8.2 -4.58419 | opp_overlap 881192 AGAAAACACAAGAAA CACCACTTTT CAGC ATAAGTGGTG TTTTTTTTCTTTCAT BPUM_0802 882365 - 881232 - | monooxygenase BPUM_0803 882587 - 883039 + | hypothetical protein yvrL 883466 - 883044 - | hypothetical protein TERM 1305 883526 - 883495 - R 95 -14.6 -3.19602 | opp_overlap 883524, overlap 883493 883497 TCCTTTACATGAAGA TACCTGCAAAAAGG ATAG CCTTTTTGCAGGAA GGTTGGAATCAATCC TERM 1306 883524 - 883497 - R 100 -17.2 -3.16071 | overlap 883495 883493 CTTTACATGAAGATA CCTGCAAAAAGG ATAG CCTTTTTGCAGG AAGGTTGGAATCAAT oxdC 884698 - 883535 - | oxalate decarboxylase TERM 1307 884501 - 884512 + g 85 -7.2 -4.84017 | overlap 884511 TACCGTGACTTCTCT GGCG TAAC CGCC TTTTTCTAAACGGTT BPUM_0806 884957 - 884793 - | hypothetical protein TERM 1308 885600 - 885587 - gH 79 -6.7 -4.63748 | AAACAATGAAAGAAA TAGCC GACC GGCTA GGCGAAACGAGACAA yvrI 885124 - 885726 + | DNA-directed RNA polymerase sigma subunit FliA yvrH 885680 - 885895 + | response regulator TERM 1309 885912 - 885943 + T 100 -2.3 -6.04378 | gap 1, opp_overlap 885916, overlap 885913 885916 AGTTGTAAGCACAAA AAAAGACTC-GCTC ACACA GAGCCGAGTCTTAA TTTTTTTTGTAGTTT TERM 1310 885916 - 885939 + T 75 -7.5 -4.16605 | gap 1, opp_overlap 885916, overlap 885913 885912 GTAAGCACAAAAAAA GACTC-GCTC ACACA GAGCCGAGTC TTAATTTTTTTTGTA TERM 1311 885939 - 885916 - T 100 -7.5 -5.71983 | gap 1, opp_overlap 885916 885913 885912 GTAAGCACAAAAAAA GACTC-GCTC ACACA GAGCCGAGTC TTAATTTTTTTTGTA yfhP 886903 - 885923 - | membrane bound metal dependent hydrolase TERM 1312 886971 - 886982 + H 74 -5.8 -4.67563 | opp_overlap 886970, overlap 886973 886975 TTCTTTCAAGACTAT GTGC AAAA GCAC TTTTGCTTTGTCTTG TERM 1313 886973 - 886988 + H 70 -6.2 -4.31 | opp_overlap 886970, overlap 886971 886975 CTTTCAAGACTATGT GCAAAA GCAC TTTTGC TTTGTCTTGATTTAA TERM 1314 887614 - 887600 - g 73 -2.8 -5.0925 | overlap 887603 TTGCAAAACCAAAAA CGAGAA ATA TTTTCG AGTTTGCGGTCGATC mutY 887095 - 888195 + | adenine glycosylase yfhS 888406 - 888182 - | hypothetical protein TERM 1315 889088 - 889066 - g 74 -9.8 -3.08133 | opp_overlap 889066 TACCGATGCACTCAA GCACTTCCCG AAC CGAGAAGAGC TTTTAGAAGATGCCA TERM 1316 889066 - 889088 + G 76 -7.6 -4.09685 | opp_overlap 889066 TACCGATGCACTCAA GCACTTCCCG AAC CGAGAAGAGC TTTTAGAAGATGCCA fabL 888488 - 889240 + | enoyl-(acyl carrier protein) reductase sspE 889301 - 889465 + | small acid-soluble spore protein E TERM 1317 889506 - 889483 - T 87 -10.4 -4.28488 | ACTGAAACAGAGAAA GCACTTCATC TACG AATGAAGTGC TCAGACCGTAGACAA TERM 1318 889513 - 889559 + T 93 -4.7 -5.75342 | gap 2, opp_overlap 889523, overlap 889523 ATGAAGTGCTCAGAC CGTAGACAAACCCTACCTTTACT TCA AGTAAAAGTGGGGTTT-TC-ACA TTTTTTTTGAAAAAC TERM 1319 889523 - 889551 + T 88 -11.1 -4.35095 | opp_overlap 889523, overlap 889513 CAGACCGTAGACAAA CCCTACCTTTACT TCA AGTAAAAGTGGGG TTTTCACATTTTTTT TERM 1320 889551 - 889523 - T 86 -11.1 -4.05747 | opp_overlap 889523 889513 CAGACCGTAGACAAA CCCTACCTTTACT TCA AGTAAAAGTGGGG TTTTCACATTTTTTT TERM 1321 889590 - 889615 + T 100 -13.4 -3.98747 | ATCATGTGTTTTACG CTGGACATGG TACTTT CCATGTCCAG TTTGCTAGTTTTTTA BPUM_0814 890940 - 889585 - | transposase TERM 1322 889701 - 889711 + g 81 -5.4 -5.10933 | GAAGTTTCGTCCAAC GCAT ACC ATGC TTTTCTTTTGCATCC TERM 1323 889976 - 889959 - G 80 -9.9 -3.73859 | TACGATAAGAGAGAA TTTGCCC GTTG GGGCAAA TGTAACAATCAAAAT TERM 1324 890309 - 890333 + g 100 -9.3 -5.02645 | overlap 890313 ACATAATAGCCACTC TCTGGGTCAGT TGT ACTGACCTTGA TTTCTTTTGTTTCTT TERM 1325 890313 - 890329 + g 88 -10.9 -3.85719 | overlap 890309 AATAGCCACTCTCTG GGTCAGT TGT ACTGACC TTGATTTCTTTTGTT TERM 1326 890519 - 890532 + g 75 -3.1 -5.18357 | gap 1, overlap 890519 ATGAAGGCGATAGAC GGG-TC AAC GAGCCC TTTTTTCATCGCTTC TERM 1327 891009 - 890987 - R 100 -15 -5.39721 | overlap 891008 TTATTATACAAAAAA GCTTGTAGAC TTT GTCTACAAGC TGAGCACTTCATCTA TERM 1328 891013 - 891036 + r 93 -9.7 -4.90525 | opp_overlap 891008 TTGTCTACAAGCTGA GCACTTCAT CTACGA ATGAAGTGC TTTTCTTTCAGATTG TERM 1329 891054 - 891092 + r 100 -21.4 -4.18506 | opp_overlap 891060, overlap 891060 TTCTTTCAGATTGTT GACAAAGGGCTAAAATGA TCT TTATTTTAGCCCTTTGTC TTCTTTTCAGCGTGA TERM 1330 891060 - 891086 + r 100 -13.2 -4.45253 | opp_overlap 891060, overlap 891054 CAGATTGTTGACAAA GGGCTAAAATGA TCT TTATTTTAGCCC TTTGTCTTCTTTTCA TERM 1331 891086 - 891060 - R 86 -11 -3.87373 | opp_overlap 891054 891060 CAGATTGTTGACAAA GGGCTAAAATGA TCT TTATTTTAGCCC TTTGTCTTCTTTTCA BPUM_0815 891328 - 891080 - | hypothetical protein TERM 1332 891223 - 891246 + g 100 -9.7 -5.2853 | opp_overlap 891226 TGTCTGCACGCTGAA GCACTTCAT CTACGA ATGAAGTGC TTTTCTTTTTGCCTC BPUM_0816 891378 - 891638 + | hypothetical protein TERM 1333 891647 - 891669 + F 91 -9.2 -5.05577 | GATGTAAAACAGTGT GCCGTTCAAT TGG GTTGAATGGC TTTTTCATTTCATTT BPUM_0817 891786 - 892316 + | hypothetical protein TERM 1334 892369 - 892323 - f 95 -12.7 -3.42319 | opp_overlap 892333, overlap 892321 892333 ACAAAATAAGCAAGA GCAA-CAAAAACCTGTTTAGCTT TTT AGGCT-AACAGGTTTTTGATTGC GTACGGATAAGAGGC TERM 1335 892333 - 892358 + F 86 -7.7 -4.88407 | gap 1, opp_overlap 892323 892321 892333 CAAGAGCAACAAAAA CCTGTTTAGCTT TTT AGGCTAA-CAGG TTTTTGATTGCGTAC TERM 1336 892358 - 892333 - f 81 -5.5 -5.19251 | gap 1, opp_overlap 892333, overlap 892323 892321 CAAGAGCAACAAAAA CCTGTTTAGCTT TTT AGGCT-AACAGG TTTTTGATTGCGTAC TERM 1337 893878 - 893863 - g 70 -5.4 -4.57569 | TCAGGTGGTCAAAAA CAACGG ATTT CCATTG CAAGGGTCTTTCTAA BPUM_0818 892411 - 894153 + | ABC transporter ATP-binding protein TERM 1338 894183 - 894159 - f 95 -12.9 -3.50326 | opp_overlap 894159 ATTAAATTAGTAGAA GCCTATCCGAT TCT AGCGGATAGGC TTTTTTATGCTAGTC TERM 1339 894159 - 894183 + F 100 -12.9 -5.32882 | opp_overlap 894159 ATTAAATTAGTAGAA GCCTATCCGAT TCT AGCGGATAGGC TTTTTTATGCTAGTC appDC 894266 - 895288 + | oligopeptide ABC transporter ATP-binding protein TERM 1340 896146 - 896136 - gf 71 -6.8 -4.18161 | opp_overlap 896136, overlap 896127 GAGAAATGCTTAAAA GCAG TAC CTGC TTTGTATGAGGAGAA appFC 895257 - 896234 + | oligopeptide ABC transporter ATP-binding protein TERM 1341 897749 - 897739 - gf 76 -6.8 -4.43477 | TCTAGTGAATTAAAA GGCT ACC AGCC GCATCCAACTGGTTC BPUM_0821 896209 - 897795 + | peptide ABC transporter ATP-binding protein TERM 1342 897825 - 897801 - f 90 -11.6 -4.07618 | opp_overlap 897804, overlap 897804 TTTCGAATAAGCAAA TAAGGGAGAT CTTGT ATCTCCCTTA TTCAAACAAAGAAAA TERM 1343 897822 - 897804 - f 79 -8.9 -4.15577 | opp_overlap 897804, overlap 897801 CGAATAAGCAAATAA GGGAGAT CTTGT ATCTCCC TTATTCAAACAAAGA TERM 1344 897804 - 897822 + F 74 -8.9 -3.61398 | opp_overlap 897804 897801 CGAATAAGCAAATAA GGGAGAT CTTGT ATCTCCC TTATTCAAACAAAGA appBC 897812 - 898858 + | peptide ABC transporter membrane protein appCC 898876 - 899772 + | oligopeptide ABC transporter membrane protein TERM 1345 899796 - 899770 - T 100 -11 -5.28831 | opp_overlap 899773, overlap 899773 ATGAAGAAAATAAAA TAAGACCAATTC TAT GAATTGGTCTTT TCTGTCTATGCTTCT TERM 1346 899793 - 899773 - T 100 -12.7 -4.68779 | opp_overlap 899773, overlap 899770 AAGAAAATAAAATAA GACCAATTC TAT GAATTGGTC TTTTCTGTCTATGCT TERM 1347 899773 - 899793 + T 100 -12.7 -4.65446 | opp_overlap 899770 899773 AAGAAAATAAAATAA GACCAATTC TAT GAATTGGTC TTTTCTGTCTATGCT ygaE 900875 - 899802 - | hypothetical protein TERM 1348 901088 - 901109 + r 74 -5.8 -4.62302 | opp_overlap 901088 TGGTCAATAAAAAAA CAGGCGCA TTTTTT TACGCCTG TTTTTGACCCTATTA TERM 1349 901109 - 901088 - R 100 -8 -5.7946 | opp_overlap 901088 TGGTCAATAAAAAAA CAGGCGCA TTTTTT TACGCCTG TTTTTGACCCTATTA gsaB 902417 - 901122 - | glutamate-1-semialdehyde aminotransferase ygaF 902547 - 903014 + | peroxiredoxin YgaF TERM 1350 903031 - 903050 + F 100 -10 -5.626 | ATCTTCACAGGATCG GACTGGCA GACA TGCCGGTC TTTTTTTGTGAAGTA perR 903173 - 903610 + | Fur family transcriptional regulator PerR TERM 1351 903618 - 903639 + T 100 -7.3 -5.68039 | opp_overlap 903618 ATCATTAATGAAAAA GCTGACC ATTTAACC GGTCAGC TTTTTTTATGACTTT TERM 1352 903639 - 903618 - T 86 -8 -4.90869 | opp_overlap 903618 ATCATTAATGAAAAA GCTGACCA TTTAAC CGGTCAGC TTTTTTTATGACTTT ygzB 903992 - 903645 - | hypothetical protein TERM 1353 904276 - 904258 - g 77 -8.2 -4.03078 | opp_overlap 904275, overlap 904261 TGATTATAGTAGAAA GAAGACAC AAA GTATCTTC TGAGACGGATAACTT ygxA 904182 - 905060 + | hypothetical protein TERM 1354 905097 - 905109 + F 70 -7.7 -3.64822 | opp_overlap 905097 ATACGTCGCTAACGA GCAAC CAA GTTGC TTTGAATGAAAAGCT TERM 1355 905172 - 905147 - f 78 -5.5 -5.1361 | gap 1, opp_overlap 905147 905149, overlap 905149 905150 AGAAATTCTAAAAAA CACTT-GACGCC CAC AGCGTCAAAATG TTATATTGAGAAAGT TERM 1356 905169 - 905149 - f 79 -8.3 -4.18259 | opp_overlap 905149 905147, overlap 905147 905150 AAATTCTAAAAAACA CTTGACGCC CAC AGCGTCAAA ATGTTATATTGAGAA TERM 1357 905168 - 905150 - f 74 -9.6 -3.09328 | opp_overlap 905149 905147, overlap 905149 905147 AATTCTAAAAAACAC TTGACGCC CAC AGCGTCAA AATGTTATATTGAGA TERM 1358 905204 - 905186 - f 86 -11 -3.95073 | TGTTATATTGAGAAA GTCGCCTC TGA GAGACGAC GAAGATGATCTTTGA TERM 1359 905288 - 905269 - f 79 -5 -5.24531 | overlap 905270 AGTTTTTATAAAAAA TCCTATGA TGTT TCATAGGT AGTCAGTCAAACGCT TERM 1360 905287 - 905270 - f 75 -8.5 -3.73995 | overlap 905269 GTTTTTATAAAAAAT CCTATGA TGTT TCATAGG TAGTCAGTCAAACGC TERM 1361 905322 - 905363 + F 71 -9.5 -2.65264 | gap 1, opp_overlap 905321 905357, overlap 905324 905326 GAGGCAGGAAATGAT CACATGCTAAGTTCGCTACA TCG TGTAGCG-ACAACGCATGTG TGATATGCATCCTGC TERM 1362 905469 - 905456 - f 73 -8.1 -3.68988 | GTCGAGCGAACAGAA GGGAG CTTG CTCCC GGATGTTAGCGGCGG TERM 1363 905545 - 905530 - f 79 -10.4 -3.33315 | opp_overlap 905520, overlap 905540 GTAAGACTGGGATAA CTCCGG GAAA CCGGAG CTAATACCGGATAGT TERM 1364 905863 - 905842 - f 81 -9.5 -3.97307 | gap 1 GTTAGGGAAGAACAA GTGCGAG-AG TAA CTGCTCGCAC CTTGACGGTACCTAA TERM 1365 906015 - 905997 - f 74 -10.2 -2.75963 | overlap 905996 AGTCTGATGTGAAAG CCCCCGGC TCA ACCGGGGA GGGTCATTGGAAACT TERM 1366 906969 - 906996 + F 75 -10 -2.98823 | opp_overlap 906995, overlap 906994 906995 GTTTTCGTCTTGTTT AGTTTTGAAGGA TCAT TCCTTCAAAACA TGTCTCTAGCGAGAC TERM 1367 907014 - 906995 - f 71 -6.4 -4.08945 | opp_overlap 906969 906995 906994, overlap 906997 ATCATTCCTTCAAAA CATGTCTC TAGC GAGACAGG ATTGTTCTTTGAAAA TERM 1368 907012 - 906997 - f 70 -7.6 -3.6422 | opp_overlap 906995 906994, overlap 906995 CATTCCTTCAAAACA TGTCTC TAGC GAGACA GGATTGTTCTTTGAA TERM 1369 907406 - 907387 - f 90 -12.2 -3.66803 | opp_overlap 907386 907385 CGGGAACAGCCCAAA CCAAGAGG CTTG CCTCTTGG GGTTGTAGGACACTC TERM 1370 908944 - 908931 - f 71 -4.5 -4.7254 | ACTGTTTAGCAAAAA CACAG GTCT CTGCG AAGCCGTAAGGCGAA TERM 1371 911162 - 911142 - f 71 -8.3 -3.47617 | opp_overlap 911151 AGTTTAAAGGTAGAA CAGAGGTCT CCA AAACCTCCG GTGTGGGTTCGATTC TERM 1372 911430 - 911410 - f 78 -9.7 -3.31263 | overlap 911412 AGTTCAGTGGTAGAA CACCACCTT GCC AAGGTGGGG GTCGCGGGTTCGAAT TERM 1373 911428 - 911412 - f 82 -10.9 -3.22475 | overlap 911410 TTCAGTGGTAGAACA CCACCTT GCC AAGGTGG GGGTCGCGGGTTCGA TERM 1374 911823 - 911849 + F 100 -10.2 -6.11392 | opp_overlap 911823, overlap 911814 911812 TATCTACGTTTCAAA CGTCTTTCTACA AAT TGTAGGAGGGCG TTTTTTTATTTGTTT BPUM_0830 911983 - 912438 + | hypothetical protein TERM 1375 912578 - 912600 + F 95 -5.5 -5.75599 | opp_overlap 912578 TTACCGTCAACCTAA CGTTCCACC CTCGT GGTGAAGCG TTTTTTTGTGGTTTA BPUM_0831 912848 - 913657 + | aminoglycoside phosphotransferase BPUM_0832 913802 - 914236 + | hypothetical protein BPUM_0833 914307 - 915005 + | hypothetical protein TERM 1376 915011 - 915038 + T 100 -15 -3.92602 | opp_overlap 915015, overlap 915015 TCAACAATAGGTGAG GAAACGGCAGAG TTCA TTCTGCCGTTTC TTTATGCCATATTCG TERM 1377 915034 - 915015 - T 79 -9.3 -3.76379 | opp_overlap 915011 915015 CAATAGGTGAGGAAA CGGCAGA GTTCAT TCTGCCG TTTCTTTATGCCATA TERM 1378 915015 - 915034 + T 89 -10 -4.56367 | opp_overlap 915015, overlap 915011 CAATAGGTGAGGAAA CGGCAGAG TTCA TTCTGCCG TTTCTTTATGCCATA BPUM_0834 915581 - 915024 - | fructose-2,6-bisphosphate 2-phosphatase TERM 1379 915628 - 915611 - R 100 -8.5 -5.67967 | ATGAGTATAAAAAAA TCATCCA GGAT TGGATGA GGATAGGTTCATTTG BPUM_0835 915828 - 915637 - | hypothetical protein TERM 1380 915950 - 915927 - R 89 -10.3 -4.45723 | opp_overlap 915927 915929 AAGAATATATGAAAA GAGCCACAC AGGATA GTGCGGCTC TTACATAGCACGATG BPUM_0836 916274 - 915951 - | hypothetical protein BPUM_0837 916975 - 916286 - | hypothetical protein BPUM_0838 917797 - 916994 - | hypothetical protein TERM 1381 917287 - 917303 + g 71 -2.2 -5.10526 | CCATGAGCTGTCTAG CGGTTC GAAGA GAGTCG TTTATTTTTTCGTCT TERM 1382 918356 - 918341 - g 87 -4.8 -5.52384 | opp_overlap 918341 GTTTTATGAAAAAAA TATTTG CGAA CAAATA TAGCTTTTTTGTATT TERM 1383 920127 - 920103 - g 89 -3.5 -5.67711 | GAAACAAAATAAAAA GACAGAGGC GATTAAA GCCCGTGTC GATAATCAGTTAAGC yfnI 918331 - 920271 + | phosphoglycerol transferase TERM 1384 920282 - 920305 + F 100 -12.5 -5.05601 | AGTAACTGAGTTTTG GGCAAGCAC AGAAGG GTGCTTGCC TTTTTCTCTCTCATC TERM 1385 920759 - 920736 - g 70 -2.5 -5.01042 | gap 1 AATTGAAATGAAAAA TGACCAACTG TATGT CAAT-GGTCA AAAAGTAGCTGAGCC sipP 920323 - 921000 + | signal peptidase 1 TERM 1386 921015 - 921030 + F 74 -9 -3.69354 | opp_overlap 921015 ATAACACGTAAAAAA GCACAC CACA GTGTGC TTTCAGCTTGTAGAC TERM 1387 921030 - 921015 - f 91 -9 -5.17054 | opp_overlap 921015 ATAACACGTAAAAAA GCACAC CACA GTGTGC TTTCAGCTTGTAGAC TERM 1388 921036 - 921058 + G 100 -15 -5.39721 | CACAGTGTGCTTTCA GCTTGTAGAC AAA GTCTACAAGC TTTTTTGTATAATAA TERM 1389 921526 - 921513 - g 75 -3.1 -5.18357 | gap 1, overlap 921514 GAAGCGATGAAAAAA GGGCTC GTT GA-CCC GTCTATCGCCTTCAT TERM 1390 921736 - 921712 - g 100 -9.3 -5.02645 | overlap 921716 AAGAAACAAAAGAAA TCAAGGTCAGT ACA ACTGACCCAGA GAGTGGCTATTATGT TERM 1391 921732 - 921716 - g 88 -10.9 -3.85719 | overlap 921712 AACAAAAGAAATCAA GGTCAGT ACA ACTGACC CAGAGAGTGGCTATT TERM 1392 922069 - 922086 + G 80 -9.9 -3.73859 | ATTTTGATTGTTACA TTTGCCC CAAC GGGCAAA TTCTCTCTTATCGTA TERM 1393 922344 - 922334 - g 81 -5.4 -5.10933 | GGATGCAAAAGAAAA GCAT GGT ATGC GTTGGACGAAACTTC TERM 1394 922455 - 922430 - g 100 -13.4 -3.98747 | TAAAAAACTAGCAAA CTGGACATGG AAAGTA CCATGTCCAG CGTAAAACACATGAT BPUM_0841 921027 - 922460 + | transposase TERM 1395 922532 - 922486 - T 93 -4.7 -5.75342 | gap 2, opp_overlap 922494, overlap 922494 GTTTTTCAAAAAAAA TGT-GA-AAACCCCACTTTTACT TGA AGTAAAGGTAGGGTTTGTCTACG GTCTGAGGATGTTCC TERM 1396 922522 - 922494 - T 88 -11.1 -4.35095 | opp_overlap 922494, overlap 922486 AAAAAAATGTGAAAA CCCCACTTTTACT TGA AGTAAAGGTAGGG TTTGTCTACGGTCTG TERM 1397 922494 - 922522 + T 86 -11.1 -4.05747 | opp_overlap 922494 922486 AAAAAAATGTGAAAA CCCCACTTTTACT TGA AGTAAAGGTAGGG TTTGTCTACGGTCTG TERM 1398 922539 - 922561 + T 100 -12.1 -5.72053 | TTGTCTACGGTCTGA GGATGTTCC ATGAG GGAACATCC TTTTTTATTTAATTC yrpD 923322 - 922570 - | hypothetical protein TERM 1399 923248 - 923238 - G 73 -5.4 -4.63218 | TCGCCCCCAATAAAA TAGC TGA GCTA ATGGCACTAGTGATC TERM 1400 923434 - 923415 - R 100 -10 -5.71712 | opp_overlap 923415 TCTCACATAAAAAAA GCCGAGAT CAGT ATCCCGGC TTTCATTATGACCTC TERM 1401 923415 - 923434 + r 74 -7.8 -4.00124 | opp_overlap 923415 TCTCACATAAAAAAA GCCGAGAT CAGT ATCCCGGC TTTCATTATGACCTC cspR 923921 - 923448 - | rRNA methyltransferase-like protein yhbB 924867 - 923965 - | hypothetical protein yhbA 926080 - 924929 - | hypothetical protein TERM 1402 926416 - 926448 + G 71 -2.1 -5.19879 | gap 1, overlap 926419 AAGGAACAATTTATT GACTCGACCAATTC CGTACA GGATTTGTCGA-TC TTTTTCTCTTTAAAA yhzB 926161 - 926757 + | hypothetical protein TERM 1403 926776 - 926741 - T 85 -12.1 -2.6197 | opp_overlap 926741 926741 926749, overlap 926738 926749 GTAAATATGAACTTA TTGAAAAAGCACTGT AGATTG ACAGTGCTTTTTCAC ATTATACTGACATAA TERM 1404 926741 - 926777 + T 81 -10.5 -3.4178 | gap 1, opp_overlap 926741 926738 926749, overlap 926741 926749 GTAAATATGAACTTA T-TGAAAAAGCACTGT AGATTG ACAGTGCTTTTTCACA TTATACTGACATAAT TERM 1405 926741 - 926776 + T 85 -12.1 -2.64747 | opp_overlap 926741 926738 926749, overlap 926741 926749 GTAAATATGAACTTA TTGAAAAAGCACTGT AGATTG ACAGTGCTTTTTCAC ATTATACTGACATAA TERM 1406 926768 - 926749 - T 83 -7.9 -4.68424 | opp_overlap 926741 926741 926749, overlap 926741 926738 GAACTTATTGAAAAA GCACTGT AGATTG ACAGTGC TTTTTCACATTATAC TERM 1407 926749 - 926768 + T 83 -7.9 -4.6902 | opp_overlap 926749 926741 926738, overlap 926741 926741 GAACTTATTGAAAAA GCACTGT AGATTG ACAGTGC TTTTTCACATTATAC TERM 1408 926835 - 926799 - T 100 -8.9 -5.60689 | opp_overlap 926799 TGACATAATAAAAAA CGCAACACTTCGTTT ATCTATG AAACGAAATACTGCG TTATAAACAAAATTA TERM 1409 927037 - 927002 - T 87 -12.2 -3.05066 | opp_overlap 926998 927005, overlap 927005 AACAATTCGTCAAGA GAATATGAAGATTTTT CGTC AAAAAACTTCATATTC TCCGTATATATTACG TERM 1410 927034 - 927005 - T 73 -8.1 -3.66556 | opp_overlap 926998 927005, overlap 927002 AATTCGTCAAGAGAA TATGAAGATTTTT CGTC AAAAAACTTCATA TTCTCCGTATATATT TERM 1411 927005 - 927034 + T 71 -8.1 -3.42241 | opp_overlap 927005 927002, overlap 926998 AATTCGTCAAGAGAA TATGAAGATTTTT CGTC AAAAAACTTCATA TTCTCCGTATATATT BPUM_0847 927737 - 927057 - | hypothetical protein TERM 1412 927622 - 927632 + g 71 -3.2 -4.91511 | GTTTTTTTATTTTTT TCTG TTG CAGG TTTTTCTGATACCGT TERM 1413 927823 - 927802 - R 100 -9.5 -5.80248 | opp_overlap 927802 TAATATACAAAAAAA GATTAGGAG AATT CTCCTAACC TTTCGCTTTTTTCTG TERM 1414 927802 - 927823 + r 73 -7.3 -4.08285 | opp_overlap 927802 TAATATACAAAAAAA GATTAGGAG AATT CTCCTAACC TTTCGCTTTTTTCTG BPUM_0848 928099 - 927818 - | hypothetical protein BPUM_0849 929001 - 928096 - | hypothetical protein BPUM_0850 930451 - 928985 - | hypothetical protein TERM 1415 929693 - 929681 - G 77 -6.2 -4.68511 | CGCAAGAGAAAGAAA GGCG CCACC CGCC GATAAAAGGATAAAC TERM 1416 929986 - 929971 - G 78 -4 -5.1244 | GCATTAAGACAAAAA GCGATT GCAA AATCAC CATCAAAAAGAACGT TERM 1417 930374 - 930350 - G 75 -2.1 -5.28942 | overlap 930356 GACGGCAAATAAAAA GAATAAGATCA CAA TGATCCGCTTC GTCTGAGTATCAAAG TERM 1418 930368 - 930356 - G 74 -6.3 -4.42156 | overlap 930350 AAATAAAAAGAATAA GATCA CAA TGATC CGCTTCGTCTGAGTA BPUM_0851 931196 - 930429 - | ABC transporter ATP-binding protein TERM 1419 931254 - 931209 - R 79 -6.9 -4.59109 | gap 1, opp_overlap 931213 931215 931227, overlap 931211 931213 931216 CATATTCTTTAAAAA CAGATCAGG-CTAAACCGCCCG CCA CAGACGGTTTAGCCCTGGTGTC ATTTCATAGAAGTAA TERM 1420 931252 - 931211 - R 81 -9.5 -3.90762 | gap 1, opp_overlap 931213 931215 931227, overlap 931209 931213 931216 TATTCTTTAAAAACA GATCAGG-CTAAACCGCCCG CCA CAGACGGTTTAGCCCTGGTG TCATTTCATAGAAGT TERM 1421 931250 - 931213 - R 90 -12.1 -3.53855 | gap 1, opp_overlap 931213 931215 931227, overlap 931211 931209 931216 TTCTTTAAAAACAGA TCAGG-CTAAACCGCCCG CCA CAGACGGTTTAGCCCTGG TGTCATTTCATAGAA TERM 1422 931213 - 931250 + r 75 -9.9 -3.03701 | gap 1, opp_overlap 931213 931211 931209 931216, overlap 931215 931227 TTCTTTAAAAACAGA TCA-GGCTAAACCGCCCG CCA CAGACGGTTTAGCCCTGG TGTCATTTCATAGAA TERM 1423 931215 - 931247 + r 76 -10.5 -2.73854 | opp_overlap 931213 931211 931209 931216, overlap 931213 931227 CTTTAAAAACAGATC AGGCTAAACCGCCCG CCA CAGACGGTTTAGCCC TGGTGTCATTTCATA TERM 1424 931246 - 931216 - R 100 -18.4 -2.89632 | opp_overlap 931215 931213 931227, overlap 931213 931211 931209 TTTAAAAACAGATCA GGCTAAACCGCCCG CCA CAGACGGTTTAGCC CTGGTGTCATTTCAT BPUM_0852 931503 - 931291 - | hypothetical protein BPUM_0853 931870 - 932019 + | hypothetical protein BPUM_0854 932269 - 933564 + | O-acetylhomoserine aminocarboxypropyltransferase TERM 1425 933590 - 933575 - T 100 -9 -5.34632 | opp_overlap 933575 AATAAAATAGAAAAA GCACAC TGTG GTGTGC TTTCAGACCGTAGAC TERM 1426 933575 - 933590 + T 74 -9 -3.54424 | opp_overlap 933575 AATAAAATAGAAAAA GCACAC TGTG GTGTGC TTTCAGACCGTAGAC TERM 1427 933599 - 933645 + T 93 -4.7 -5.75342 | gap 2, opp_overlap 933609, overlap 933609 GGTGTGCTTTCAGAC CGTAGACAAACCCTACCTTTACT TCA AGTAAAAGTGGGGTTT-TC-ACA TTTTTTTTGAAAAAC TERM 1428 933637 - 933609 - T 86 -11.1 -4.05747 | opp_overlap 933599 933609 CAGACCGTAGACAAA CCCTACCTTTACT TCA AGTAAAAGTGGGG TTTTCACATTTTTTT TERM 1429 933609 - 933637 + T 88 -11.1 -4.35095 | opp_overlap 933609, overlap 933599 CAGACCGTAGACAAA CCCTACCTTTACT TCA AGTAAAAGTGGGG TTTTCACATTTTTTT TERM 1430 933676 - 933701 + T 100 -13.4 -3.98747 | ATCATGTGTTTTACG CTGGACATGG TACTTT CCATGTCCAG TTTGCTAGTTTTTTA TERM 1431 933787 - 933797 + T 78 -5.4 -5.10933 | GAAGTTTCGTCCAAC GCAT ACC ATGC TTTTCTTTTGCATCC TERM 1432 934062 - 934045 - T 81 -9.9 -3.73859 | TACGATAAGAGAGAA TTTGCCC GTTG GGGCAAA TGTAACAATCAAAAT TERM 1433 934395 - 934419 + T 91 -9.3 -5.02645 | overlap 934399 ACATAATAGCCACTC TCTGGGTCAGT TGT ACTGACCTTGA TTTCTTTTGTTTCTT TERM 1434 934399 - 934415 + T 84 -10.9 -3.85719 | overlap 934395 AATAGCCACTCTCTG GGTCAGT TGT ACTGACC TTGATTTCTTTTGTT TERM 1435 934605 - 934618 + T 75 -3.1 -5.18357 | gap 1, overlap 934605 ATGAAGGCGATAGAC GGG-TC AAC GAGCCC TTTTTTCATCGCTTC TERM 1436 935095 - 935073 - T 100 -15 -5.39721 | TTATTATACAAAAAA GCTTGTAGAC TTT GTCTACAAGC TGAGGATGTTCCCTC TERM 1437 935099 - 935121 + T 100 -12.1 -5.72207 | opp_overlap 935095 TTGTCTACAAGCTGA GGATGTTCC CTCAT GGAACATCC TTTTTTTCATTTACC BPUM_0855 935214 - 935128 - | hypothetical protein TERM 1438 935278 - 935318 + H 93 -11.4 -4.30987 | opp_overlap 935284 935285 935287, overlap 935279 935285 935316 ATGTGAAGTTCGCCT TGAAAAGCAGGAGAAGAA GATCA TTTTTCTCCTGTTTTTCC TTTATTATGAAGGGT TERM 1439 935279 - 935317 + H 100 -14.9 -3.1811 | opp_overlap 935284 935285 935287, overlap 935278 935285 935316 TGTGAAGTTCGCCTT GAAAAGCAGGAGAAGAA GATCA TTTTTCTCCTGTTTTTC CTTTATTATGAAGGG TERM 1440 935285 - 935311 + H 93 -10.3 -5.10877 | opp_overlap 935284 935285 935287, overlap 935279 935278 GTTCGCCTTGAAAAG CAGGAGAAGAA GATCA TTTTTCTCCTG TTTTTCCTTTATTAT TERM 1441 936613 - 936597 - g 75 -2.2 -5.40474 | overlap 936599 ATTTGGTGAAAAAAA TGCGTC TGTAT GACGGA GAGAGTGTCGAAGGC prkA 935465 - 937360 + | inner spore coat serine protein kinase TERM 1442 937372 - 937403 + F 89 -8 -5.03314 | opp_overlap 937372 TTAATCAATGAAGGA GGCATTATTGGCGC ACCT GCACCGGTAATGTC TTTTTTAGAAATGAC yhbH 937501 - 938664 + | hypothetical protein TERM 1443 938683 - 938706 + F 100 -8.9 -5.36441 | opp_overlap 938683 GCACATTTGAAAAAA CCTTTCAGC ATAAGG GCTGAAGGG TTTTTTGTATGGAGA TERM 1444 938706 - 938683 - f 83 -6.7 -5.07567 | opp_overlap 938683 GCACATTTGAAAAAA CCTTTCAGC ATAAGG GCTGAAGGG TTTTTTGTATGGAGA TERM 1445 939447 - 939433 - g 78 -5.6 -4.81752 | overlap 939435 AAAAACATTGAAAAA GGCGAC AAA GTCGAC ATCGTGGTAGATGGT yhbJ 939028 - 939660 + | hypothetical protein TERM 1446 939744 - 939727 - g 73 -5.5 -4.71426 | opp_overlap 939727 939730, overlap 939730 CCTGCAGCAACAAAA CAGGGAG CAGG CTCCTTG TCTTTACTGATCATT TERM 1447 940660 - 940675 + G 77 -4.6 -4.9448 | GCGATGCTGATTATG TCCCCG ATTT CAGGGA TTTTGTTTGATAAAT yhcA 939700 - 941319 + | major facilitator transporter yhcB 941337 - 941861 + | hypothetical protein TERM 1448 942076 - 942055 - g 100 -12.3 -3.51329 | GAGCCTGAAGTAGAA GAGGAAGCG TCAA CGCCTCCTC AAACGAATGAACGAG yhcC 941875 - 942234 + | hypothetical protein TERM 1449 942272 - 942228 - T 100 -15.5 -2.92144 | gap 1, opp_overlap 942238, overlap 942191 942238 GCTAAAGCAGAAGGA CA-AATAAAAAGGAGAACCT CTCGTC AGGTTCTCCTTTTTATTATG GGACAAAAAAACCGC TERM 1450 942261 - 942238 - T 100 -11.1 -5.4182 | opp_overlap 942238, overlap 942228 AAGGACAAATAAAAA GGAGAACCT CTCGTC AGGTTCTCC TTTTTATTATGGGAC TERM 1451 942238 - 942261 + T 100 -11.1 -5.18726 | opp_overlap 942238 942228 AAGGACAAATAAAAA GGAGAACCT CTCGTC AGGTTCTCC TTTTTATTATGGGAC TERM 1452 942304 - 942284 - T 100 -10.4 -5.626 | gap 1, opp_overlap 942284 TATGGGACAAAAAAA CCGC-CGGC AGAA GCCGAGCGG TTTTCCTTCACTCTA TERM 1453 942284 - 942304 + T 89 -10.4 -4.44548 | gap 1, opp_overlap 942284 TATGGGACAAAAAAA CCGC-CGGC AGAA GCCGAGCGG TTTTCCTTCACTCTA cspB 942588 - 942349 - | major cold shock protein yhcK 943852 - 942767 - | ABC transporter ATP-binding protein BPUM_0864 943933 - 944331 + | hypothetical protein TERM 1454 944333 - 944360 + T 100 -13.6 -5.05116 | gap 1, opp_overlap 944333 TTTCAGAAGAATAAA CAGGAGCC-TCAA TAT TTGAAGGCTCCTG TTTTCTTATTTGTGC TERM 1455 944360 - 944333 - T 100 -13.6 -4.51812 | gap 1, opp_overlap 944333 TTTCAGAAGAATAAA CAGGAGCC-TCAA TAT TTGAAGGCTCCTG TTTTCTTATTTGTGC yhcM 944764 - 944366 - | spore protein YhcM TERM 1456 944732 - 944699 - G 71 -6.7 -4.17316 | opp_overlap 944729, overlap 944700 AGCCGGGGAAAATAA TGCAATGATGGCTGT TGAT ACTGCGATCATTGCG CCAGTGCTCATGCCT TERM 1457 944731 - 944700 - G 77 -10.2 -3.09908 | opp_overlap 944729, overlap 944699 GCCGGGGAAAATAAT GCAATGATGGCTGT TGAT ACTGCGATCATTGC GCCAGTGCTCATGCC yhcN 944913 - 945422 + | hypothetical protein TERM 1458 945434 - 945452 + F 93 -7.4 -5.63517 | opp_overlap 945434, overlap 945424 ATAGCTACGACAAAA GCCGTATG TCA TATGCGGC TTTTTTGTTTGGAAC yhcP 945558 - 946454 + | hypothetical protein TERM 1459 946448 - 946474 + T 100 -10.8 -5.52384 | opp_overlap 946448 ATATCAAAGAAAAAA CGGCTGACCAGT GAA AATGGCCAGCCG TTTTTTTAATGAAGG TERM 1460 946474 - 946448 - T 100 -13 -5.69793 | opp_overlap 946448 ATATCAAAGAAAAAA CGGCTGACCAGT GAA AATGGCCAGCCG TTTTTTTAATGAAGG yhcQ 947124 - 946480 - | hypothetical protein BPUM_0869 947269 - 950649 + | sensor histidine kinase TERM 1461 951258 - 951246 - g 79 -6.9 -4.61868 | overlap 951228 951249 951250 TATGTAGAGACAAAA CCAGC TCA GCCGG CTGGCGGTGGATACA yhcR 950736 - 953627 + | endonuclease TERM 1462 953805 - 953793 - g 78 -9.1 -3.74928 | AGACGAAGCGAAGAA GGTCG TGG CGACC GATCAAGGGATGTCC TERM 1463 953974 - 953986 + G 74 -7.7 -3.96624 | opp_overlap 953974 953973 TATCCGGATCAAAAT GGACA GAT TGTCC TTTCTGGTCACCGTG TERM 1464 953995 - 954009 + G 78 -10 -3.53012 | ATTGTCCTTTCTGGT CACCGT GAC ACGGTG TTTCGCCGGACAGGC yhcS2 953674 - 954240 + | C60A subfamily peptidase TERM 1465 954271 - 954248 - T 82 -5.2 -5.47159 | opp_overlap 954250, overlap 954250 CTGAATAAAGAAAAA GAGCCTGCTT TCGT ACGCAGGCTT TTTGTTAATGGATGA TERM 1466 954250 - 954269 + T 89 -7.8 -5.14163 | opp_overlap 954250 954248 GAATAAAGAAAAAGA GCCTGCTT TCGT ACGCAGGC TTTTTGTTAATGGAT TERM 1467 954269 - 954250 - T 79 -7.8 -4.35561 | opp_overlap 954250, overlap 954248 GAATAAAGAAAAAGA GCCTGCTT TCGT ACGCAGGC TTTTTGTTAATGGAT rluA1 955184 - 954276 - | pseudouridylate synthase yhcU 955294 - 955644 + | hypothetical protein BPUM_0874 955869 - 955717 - | hypothetical protein TERM 1468 955816 - 955841 + g 100 -9.8 -4.43844 | gap 1, opp_overlap 955819 AACCGAACACGGATA GGAGCCTGACA AACGA TG-CAGGCTCC TTTTATACATAATCA yhcW 955953 - 956618 + | HAD family phosphatase TERM 1469 957835 - 957813 - g 72 -7.8 -3.89524 | opp_overlap 957813 ATCGCAGCTGACAAA GGAGCAAAAA TTA TTTTCACTCC GTTTTGTACAGAAGA yhcX 956634 - 958172 + | amidohydrolase TERM 1470 958203 - 958177 - g 70 -8 -3.69883 | opp_overlap 958178, overlap 958173 958178 ATAAGAAATAATGAA GGAAGCGCCT ATCGTTG AGGCGCTTCT TTTTGATAACATCAG TERM 1471 958178 - 958202 + G 100 -11.5 -4.7373 | opp_overlap 958177 958173 958178 TAAGAAATAATGAAG GAAGCGCCT ATCGTTG AGGCGCTTC TTTTTGATAACATCA TERM 1472 958202 - 958178 - g 81 -11.5 -2.80303 | opp_overlap 958178, overlap 958177 958173 TAAGAAATAATGAAG GAAGCGCCT ATCGTTG AGGCGCTTC TTTTTGATAACATCA TERM 1473 958205 - 958219 + G 84 -3.6 -5.47218 | opp_overlap 958173, overlap 958207 GTTGAGGCGCTTCTT TTTGAT AAC ATCAGA TTTTTTTCAATGGCC BPUM_0877 958172 - 958717 + | hypothetical protein TERM 1474 958701 - 958726 + F 100 -8.3 -5.74288 | opp_overlap 958701 ATATGGATGAGGAAA GAAGCGGCCTT TCTT AAGGGTGCTTC TTTTTTATTGTTTAT BPUM_0878 958805 - 959722 + | malonate efflux carrier TERM 1475 960424 - 960397 - g 77 -4.9 -5.00642 | opp_overlap 960401, overlap 960401 GAAGTGACACAAAAA CAAGTGCTTGC GCTCAA GCAAACATTTG CAGATCTTGTGCTCA TERM 1476 960778 - 960792 + G 100 -8.6 -4.87892 | ATTGCATATGAGCAT CAAGGT CAA ACCTTG TTTATTTTATTAAAC BPUM_0879 959755 - 961347 + | hypothetical protein bioA 961592 - 962932 + | aminotransferase TERM 1477 962932 - 962949 + F 100 -9.9 -5.626 | opp_overlap 962935 CATGGCACAGCTATA GCAGAGA GACT TCTCTGC TTTTTTTATGGAATA TERM 1478 963403 - 963415 + G 80 -6.3 -4.90266 | AAAAAAGGTATACGC CATTC AGC GAATG TTTTTACTTGATACG TERM 1479 963609 - 963593 - g 70 -7.9 -3.57639 | overlap 963591 GAAGATGTAGAAAGA GCGCTTG AAG CAGGCGC TACAGCTGTGACGAC glpP 963104 - 963661 + | glycerol-3-phosphate responsive antiterminator glpF 963875 - 964690 + | MIP family major intrinsic protein channel protein glpK 964706 - 966202 + | glycerol kinase TERM 1480 966256 - 966306 + F 100 -15.7 -5.28942 | gap 1, overlap 966303 GGTTGGAGAACTGGA GAGACCGCAGGCA-CTGAAGTGTA GAAA TACGCTTTGGGTGTTTGCGGTCTC TTTTTCTTTACCGTA glpD 966342 - 968003 + | glycerol-3-phosphate dehydrogenase TERM 1481 968028 - 968012 - f 100 -8 -5.62288 | TGAATAAAAGAAAAA GCCGAT CATAT ATCGGC TTCAGCGTGTAGACA TERM 1482 968196 - 968158 - f 100 -20 -4.18506 | opp_overlap 968164, overlap 968164 TCACGCTGAAAAGAA GACAAAGAGCTAAAATAA AGA TCATTTTAGCTCTTTGTC AACAACCTGAAGCCG TERM 1483 968190 - 968164 - f 100 -11.8 -4.45253 | opp_overlap 968164, overlap 968158 TGAAAAGAAGACAAA GAGCTAAAATAA AGA TCATTTTAGCTC TTTGTCAACAACCTG TERM 1484 968164 - 968190 + F 79 -9.6 -3.86015 | opp_overlap 968164 968158 TGAAAAGAAGACAAA GAGCTAAAATAA AGA TCATTTTAGCTC TTTGTCAACAACCTG TERM 1485 968208 - 968224 + F 100 -8 -6.08342 | TGTCAACAACCTGAA GCCGAT CATAT ATCGGC TTTTTTTATTTGTTC TERM 1486 969656 - 969642 - g 85 -5.7 -5.24129 | GCTTTCTATAAAAAA CAAGG CAAGT CCTTG TACGATGCGCTTGTT BPUM_0885 968337 - 970082 + | phosphoglucomutase TERM 1487 970092 - 970115 + F 91 -9.6 -4.87665 | opp_overlap 970091 970092 970109, overlap 970110 970112 AAATAAACAAACAAG GCCATCGTGT GAAT GCATGATGGC TTTTTCTCCATCAAA TERM 1488 971005 - 970987 - g 71 -4.6 -4.63928 | AGAGGACTTGAAAAA GGATTC ACAACAG GAATCC AAGAGTATGCAAAAC yhcY 970216 - 971379 + | spore sensor histidine kinase yhcZ 971376 - 972026 + | transcriptional regulator BPUM_0888 972279 - 972115 - | hypothetical protein TERM 1489 972209 - 972182 - G 100 -12.9 -4.26792 | opp_overlap 972182 AGATAAACGTTAAAA GACTTGATGAG TATATG CTCATCAAGTC TTTTTTTATTTTGAA TERM 1490 972182 - 972209 + g 100 -13.6 -6.09196 | opp_overlap 972182 AGATAAACGTTAAAA GACTTGATGAGT ATAT GCTCATCAAGTC TTTTTTTATTTTGAA TERM 1491 972866 - 972878 + G 71 -4.8 -4.67943 | TACTTTACATTAGTT TGGC CGGAT GCCA TTTTCTATATTGAAG BPUM_0889 972296 - 973162 + | hypothetical protein TERM 1492 973170 - 973196 + T 86 -11 -4.1399 | opp_overlap 973176, overlap 973176 ACTGCTAAATGTATG TAAAAAGGCTGA TGA TCAGCCTTTTTC TTTATGTGTACATCG TERM 1493 973190 - 973176 - T 89 -10 -4.69027 | opp_overlap 973170 973176 AAATGTATGTAAAAA GGCTGA TGA TCAGCC TTTTTCTTTATGTGT TERM 1494 973176 - 973190 + T 100 -10 -5.4433 | opp_overlap 973176, overlap 973170 AAATGTATGTAAAAA GGCTGA TGA TCAGCC TTTTTCTTTATGTGT yhdB 973479 - 973198 - | hypothetical protein TERM 1495 973247 - 973224 - G 85 -9.6 -4.15044 | opp_overlap 973229 TCGGTTGTGAATAAA CTTCAGCAGC AGCA GCTTCTGAAG CATGGTCAATGTACT yhdC 973575 - 973958 + | hypothetical protein TERM 1496 973984 - 973964 - T 100 -11.2 -5.60993 | CCGGCTATAAAAAAA GCACCTCT TTATT AGAGGTGC TCCAGCGTGTAGACA TERM 1497 974044 - 974090 + T 81 -10.4 -3.63837 | opp_overlap 974045 974048 974050 974055, overlap 974046 974055 TCTATCATGCTGAAA AGTAGACAAAAGGCTAAAATCA AGA TTATTTTAGCCTTTTGTCAATA TTCTTAAGCCATTAT TERM 1498 974089 - 974045 - T 90 -11.7 -4.12188 | opp_overlap 974044 974046 974055, overlap 974048 974050 974055 CTATCATGCTGAAAA GTAGACAAAAGGCTAAAATCA AGA TTATTTTAGCCTTTTGTCAAT ATTCTTAAGCCATTA TERM 1499 974046 - 974088 + T 100 -15.2 -3.39556 | opp_overlap 974045 974048 974050 974055, overlap 974044 974055 TATCATGCTGAAAAG TAGACAAAAGGCTAAAATCA AGA TTATTTTAGCCTTTTGTCAA TATTCTTAAGCCATT TERM 1500 974086 - 974048 - T 100 -17.8 -3.09004 | opp_overlap 974046 974044 974055, overlap 974045 974050 974055 TCATGCTGAAAAGTA GACAAAAGGCTAAAATCA AGA TTATTTTAGCCTTTTGTC AATATTCTTAAGCCA TERM 1501 974084 - 974050 - T 95 -14.6 -3.10091 | opp_overlap 974046 974044 974055, overlap 974048 974045 974055 ATGCTGAAAAGTAGA CAAAAGGCTAAAATCA AGA TTATTTTAGCCTTTTG TCAATATTCTTAAGC TERM 1502 974055 - 974079 + T 84 -8.7 -4.47873 | opp_overlap 974055 974050 974048 974045, overlap 974046 974044 GAAAAGTAGACAAAA GGCTAAAATCA AGA TTATTTTAGCC TTTTGTCAATATTCT TERM 1503 974079 - 974055 - T 86 -8.7 -4.6709 | opp_overlap 974046 974044 974055, overlap 974050 974048 974045 GAAAAGTAGACAAAA GGCTAAAATCA AGA TTATTTTAGCC TTTTGTCAATATTCT katX2 975577 - 974102 - | catalase KatX2 TERM 1504 975738 - 975714 - R 100 -12.3 -5.33026 | opp_overlap 975721 GAAGGTAAAGAAAAA GACGAAAGAAT AGA ATTCTTTCGCC TAAAGGAGGAGCTCT TERM 1505 975746 - 975764 + r 72 -5.2 -4.72188 | opp_overlap 975746, overlap 975749 975754 CTTTCGCCTAAAGGA GGAGCTCT CTA AGAGCATC TTTGTTTTGAGTTAA yhdE 976169 - 975738 - | transcriptional regulator TERM 1506 976656 - 976629 - g 70 -2.8 -5.03314 | gap 1, overlap 976631 GTGATGGTCAAAAAA GAGCAATATCCAA TCG TCGGATATCAC-C TGATTGAAGGAATGA TERM 1507 977374 - 977420 + G 100 -8.8 -4.61199 | AAGCAGCTTCCCGCA TTGACCGTTCATTCCTTCAATC AGT GGTTGGAGAAGGGAAAGGTCAA TTTTATCTATGCGGT hmp 976353 - 977552 + | nitric oxide dioxygenase spoVR 977620 - 979044 + | stage V sporulation protein R TERM 1508 979079 - 979048 - T 84 -7.5 -4.83615 | opp_overlap 979054, overlap 979054 TATCTCGCATAAAAA CAAAAAGATGTCT CTGAGC AGACATCTTTTTT GCCGATTTTATTGGT TERM 1509 979054 - 979073 + T 83 -6.5 -5.08011 | opp_overlap 979048 979054 GCATAAAAACAAAAA GATGTCT CTGAGC AGACATC TTTTTTGCCGATTTT TERM 1510 979073 - 979054 - T 100 -6.5 -5.69262 | opp_overlap 979054, overlap 979048 GCATAAAAACAAAAA GATGTCT CTGAGC AGACATC TTTTTTGCCGATTTT phoA 980451 - 979087 - | alkaline phosphatase A TERM 1511 980402 - 980418 + g 74 -7.9 -3.94465 | opp_overlap 980401, overlap 980401 ATCGATAGCACAGAT GCTGCCG CCA CTGCAGC TATTTTCGTTTTCGA TERM 1512 981150 - 981136 - g 84 -6.4 -5.08011 | AAAATCGGCAAAAAA TACGGC ATG ACCGTA AAAGAGCTGAAATCG TERM 1513 981278 - 981256 - g 80 -10 -3.57883 | opp_overlap 981256 981259, overlap 981245 ACAACACCTGTGAAA GAAAAAACAG TTT CTGTTTCTTC TTTGAACACGTCTAA TERM 1514 981460 - 981476 + G 75 -5.1 -4.84673 | ATGAAAAGCGTATCT TCTCCAA AGG TTGGCGA TTTTGTGTTCTTTAC lytE 980806 - 981639 + | vegetative cell wall hydrolase orfX 981746 - 982069 + | transposase TERM 1515 982627 - 982601 - g 93 -12.4 -2.99545 | opp_overlap 982597 TGGAGACATTAGAGA GTTTGACATCCC AAC GGGATGTCAAAG GAGCTGTACTTCATT TERM 1516 982918 - 982884 - g 100 -11.4 -4.47686 | CCAGAAAAAATTAAA CCAGTGCGCTCCGGTA GAA TACCGTCACACACTGG CAGCTTAGGCTTTTT BPUM_0899 982117 - 982926 + | integrase TERM 1517 983024 - 983059 + T 100 -18.4 -4.4261 | opp_overlap 983024 TTGATATTCAAAAAA GCCCGTGCTACTTGGC ATTA GTCAAGTAACACGGGC TTTTCATGTTGGAAA TERM 1518 983059 - 983024 - T 100 -18.4 -5.1287 | opp_overlap 983024 TTGATATTCAAAAAA GCCCGTGCTACTTGGC ATTA GTCAAGTAACACGGGC TTTTCATGTTGGAAA yhdK 983369 - 983079 - | hypothetical protein TERM 1519 983171 - 983183 + g 87 -6.2 -5.14563 | opp_overlap 983170 CACCGAGGAATCCAG GGCC CGTAC GGCC TTTTTTAATGAACAG yhdL 984418 - 983357 - | hypothetical protein TERM 1520 984289 - 984276 - G 73 -3.8 -4.99035 | GGACTGATAGAAAAA TCGG TCCAAT CCGA GTCGTTCAGTTCCTG sigM 984899 - 984408 - | RNA polymerase sigma factor SigM TERM 1521 985262 - 985240 - H 71 -4.2 -4.70921 | TATAATAGAAACAAA TCCTTCATTC TTC AAACAAAGGA AGTGCACTATGTATA TERM 1522 985599 - 985577 - g 70 -9.3 -2.86636 | overlap 985576 AAATTATTAAAAGAG GGAAAAATC GTTGG GATTTTTCC AAGCGGAACACGTAC plsC 985271 - 985873 + | 1-acylglycerol-3-phosphate O-acyltransferase TERM 1523 985912 - 985871 - T 89 -12 -3.28592 | gap 2, opp_overlap 985880 985901, overlap 985880 TTAATGGAAAAAGCA TAAGAAAAACGACCGCTTGC TTTG GCAAG-GGTCGTTTTT-TTA TTAAGAAGCGCCTTC TERM 1524 985904 - 985880 - T 100 -10.8 -5.25772 | gap 1, opp_overlap 985880 985901, overlap 985871 AAAGCATAAGAAAAA CGACCGCTTGC TTTG GCAAG-GGTCG TTTTTTTATTAAGAA TERM 1525 985880 - 985904 + T 100 -10.8 -5.7946 | gap 1, opp_overlap 985871 985880, overlap 985901 AAAGCATAAGAAAAA CGACCGCTTGC TTTG GCAAG-GGTCG TTTTTTTATTAAGAA yhdP 987244 - 985913 - | TlyC family hemolysin TERM 1526 987103 - 987114 + g 75 -5.8 -4.73635 | TGGTGACATGCTTGA CAGC AACT GCTG TTTTATTACCTTCTG cueR 987743 - 987303 - | MerR family transcriptional regulator yhdT 988078 - 989460 + | TlyC family hemolysin TERM 1527 989444 - 989468 + F 93 -7.2 -5.54264 | opp_overlap 989444 TAGTAAATGAAATGA CCTTGAGC GAAAAATAA GCTCAAGG TTTTTTTAGGTATTT TERM 1528 989621 - 989590 - g 86 -3.2 -5.64274 | gap 1, opp_overlap 989591 989596, overlap 989591 TCACGGAGAAAAAAA CCTC-AATGAAAC GAATTGA GTTTCATTTGAAG AATTTCAAAAATTAC BPUM_0907 989550 - 989942 + | hypothetical protein ccrB1 990304 - 989939 - | camphor resistance protein CrcB1 ccrB2 990700 - 990323 - | camphor resistance protein CrcB2 TERM 1529 990743 - 990727 - R 76 -3.6 -5.24129 | CTCCTTTAGAAAAAA TGGCGG GTGAT CCGTCA CGACACCATCAACGG ugpQ 991422 - 990706 - | glycerophosphodiester phosphodiesterase BPUM_0911 991653 - 991456 - | hypothetical protein yhdX 991704 - 991805 + | hypothetical protein TERM 1530 991879 - 991856 - f 86 -12.4 -2.78505 | opp_overlap 991857, overlap 991853 991851 CATAATTGAACATCA TGCCTCGGGA CTCG TCCCGAGGCT TTTTATTTAGAGGTC TERM 1531 991857 - 991878 + F 100 -15.9 -5.27938 | opp_overlap 991856 991853 991851 ATAATTGAACATCAT GCCTCGGGA CTCG TCCCGAGGC TTTTTATTTAGAGGT yhdY 991970 - 993058 + | MscS family small conductance mechanosenstive ion channel protein TERM 1532 993163 - 993176 + G 71 -6.7 -4.18018 | opp_overlap 993163, overlap 993159 GGTATGAGCACGGAA TCAGG TATT CCTGA TTTTAGGTCAACGGG TERM 1533 993424 - 993412 - g 82 -4.7 -5.39721 | GGATTACATAAAAAA GCAGG AAG CCAGC ATGTATATGAACTCC yhdZ 993073 - 993819 + | NAD-dependent deacetylase TERM 1534 993854 - 993830 - T 100 -12.2 -4.58236 | gap 1, opp_overlap 993830 TATAAAACATTAAAA CACCCGCATCC GATA GG-TGCGGGTG TTTCTTTATTGCTGC TERM 1535 993830 - 993854 + T 100 -13.6 -4.70887 | opp_overlap 993830 TATAAAACATTAAAA CACCCGCATC CGATA GGTGCGGGTG TTTCTTTATTGCTGC yheN1 994714 - 993860 - | polysaccharide deacetylase TERM 1536 994654 - 994630 - G 73 -5.7 -4.45696 | CCCAAATAAAAAAGA GGATCAGTGAC AGA ATCACTAAACC AATCGCCTTTGAGAG dat 995011 - 995868 + | D-amino-acid transaminase TERM 1537 995867 - 995912 + T 91 -8.5 -5.09259 | opp_overlap 995876 995878, overlap 995878 CATCAATTTCTTCGT AAATAAAAAGAGGCTGTAAAC GAAT GTTTACAGCCTTTTGTGATTC TTTTATTTTACAATG TERM 1538 995903 - 995876 - T 100 -11.4 -5.27335 | opp_overlap 995867 995878, overlap 995878 CTTCGTAAATAAAAA GAGGCTGTAAAC GAAT GTTTACAGCCTT TTGTGATTCTTTTAT TERM 1539 995901 - 995878 - T 100 -14 -4.27026 | opp_overlap 995878 995867, overlap 995876 TCGTAAATAAAAAGA GGCTGTAAAC GAAT GTTTACAGCC TTTTGTGATTCTTTT TERM 1540 995878 - 995901 + T 100 -14 -4.65512 | opp_overlap 995876 995878, overlap 995867 TCGTAAATAAAAAGA GGCTGTAAAC GAAT GTTTACAGCC TTTTGTGATTCTTTT nhaX 996439 - 995915 - | universal stress protein NhaX TERM 1541 996481 - 996503 + H 89 -7.8 -5.06816 | opp_overlap 996481 CCGTTATCTGAAAAA GATACACATC AAG GATATGTATC TTTTTGTTAGAAAAT TERM 1542 996503 - 996481 - H 89 -10 -4.62069 | opp_overlap 996481 CCGTTATCTGAAAAA GATACACATC AAG GATATGTATC TTTTTGTTAGAAAAT TERM 1543 996727 - 996757 + H 86 -9.1 -4.65895 | gap 1, opp_overlap 996727 996752 GATCGGATGAATCAA GGCGTATGTTG-CG TATT TGTCAACATGCGCC TTTTTACATGAAGAA TERM 1544 996762 - 996814 + H 85 -11.6 -3.63195 | gap 1, opp_overlap 996752 996770 996775, overlap 996767 996775 CAACATGCGCCTTTT TACATGAAGAAAAGAGGCGTACCAG ATAG CTGGT-TGCCTCTTTTTTTGTTGTA TTCATTTCGTATTTC TERM 1545 996767 - 996809 + H 81 -10.1 -3.80697 | gap 1, opp_overlap 996752 996770 996775, overlap 996762 996775 TGCGCCTTTTTACAT GAAGAAAAGAGGCGTACCAG ATAG CTGGT-TGCCTCTTTTTTTG TTGTATTCATTTCGT TERM 1546 996801 - 996775 - H 81 -7.3 -4.75472 | gap 1, opp_overlap 996767 996762 996775, overlap 996752 996770 TTTACATGAAGAAAA GAGGCGTACCAG ATAG CTGGTT-GCCTC TTTTTTTGTTGTATT TERM 1547 996775 - 996801 + H 100 -9.5 -5.94214 | gap 1, opp_overlap 996752 996775 996770, overlap 996767 996762 TTTACATGAAGAAAA GAGGCGTACCAG ATAG CTGGT-TGCCTC TTTTTTTGTTGTATT TERM 1548 997604 - 997620 + G 70 -5.7 -4.36914 | overlap 997606 GAATCGGTCGCAGGC GTCCGGG TCA TCCGGTC TTTTGTACAGGAGAA TERM 1549 998301 - 998275 - g 75 -5.1 -4.78839 | overlap 998277 AAGTGTAGAAGAAAA TATGCGTTTCG GTCAT CGAGACGCAAA ACAAAATGAATTAGC TERM 1550 998299 - 998277 - g 74 -7.7 -4.00512 | overlap 998275 GTGTAGAAGAAAATA TGCGTTTCG GTCAT CGAGACGCA AAACAAAATGAATTA TERM 1551 998636 - 998624 - g 75 -9.1 -3.67597 | CTTGTTATGGAAGAA GGACG CAT CGTCC AAAAGGGAACTCACA yheI 996983 - 998740 + | ABC transporter ATP-binding protein yheH 998737 - 1000749 + | ABC transporter ATP-binding protein TERM 1552 1000763 - 1000795 + T 72 -9.3 -2.78679 | opp_overlap 1000768, overlap 1000768 AGATGATGAATCACA AAAAAGAGCCTCA CATTGAA TGAGGCTCTTTTG ATTTGCATAAAAAAG TERM 1553 1000768 - 1000790 + T 88 -9.2 -4.56914 | opp_overlap 1000768, overlap 1000763 ATGAATCACAAAAAA GAGCCTCA CATTGAA TGAGGCTC TTTTGATTTGCATAA TERM 1554 1000790 - 1000768 - T 100 -9.9 -5.38249 | opp_overlap 1000768 1000763 ATGAATCACAAAAAA GAGCCTCAC ATTGA ATGAGGCTC TTTTGATTTGCATAA yheG 1001472 - 1000855 - | NADH-flavin reductase TERM 1555 1001717 - 1001740 + r 72 -9.6 -2.79501 | opp_overlap 1001717, overlap 1001720 ATAATAACAAAAAAA GAAGACACCT TAAG AGGTGCCTTC TATGATCCAAATATG TERM 1556 1001740 - 1001717 - R 100 -11.8 -5.97979 | opp_overlap 1001717 1001720 ATAATAACAAAAAAA GAAGACACCT TAAG AGGTGCCTTC TATGATCCAAATATG sspB 1001962 - 1001759 - | small acid-soluble spore protein B TERM 1557 1002178 - 1002155 - R 100 -14 -5.52909 | CAACATGCAAAAAAA CCATCACTCA ATCA TGAGTGATGG CACTGCATATATTTC msmX 1003301 - 1002195 - | sugar ABC transporter ATP-binding protein BPUM_0923 1004316 - 1003441 - | transcriptional regulator TERM 1558 1003490 - 1003476 - G 71 -4.2 -4.80453 | overlap 1003479 TCATCATAAAATAAA CAGCAG ATG CTTCTG GAAAATGTCGTATAT TERM 1559 1003984 - 1004004 + g 100 -15.5 -4.9448 | GAAATGAGTATGTTC GAGGCTGTG GAC CACAGCCTC TTTTATTTGCTGCCT BPUM_0924 1004546 - 1004337 - | hypothetical protein yheD 1006058 - 1004700 - | hypothetical protein yheC 1007118 - 1006015 - | spore protein YheC TERM 1560 1006846 - 1006860 + gH 73 -4.2 -4.86862 | CGGATACTTTTTCAG CCATTC CAT GATTGG TTTTGCTTTTTTAGA yheB 1007333 - 1008466 + | hypothetical protein yheA 1008588 - 1008944 + | hypothetical protein TERM 1561 1008951 - 1008968 + F 100 -8.4 -5.95539 | opp_overlap 1008946 1008951 GAAAATTAATGAAAA GGGCGA TGATAT TCGCCC TTTTTTTATTTAACA TERM 1562 1008968 - 1008951 - f 86 -8.4 -4.5528 | opp_overlap 1008951, overlap 1008946 GAAAATTAATGAAAA GGGCGA TGATAT TCGCCC TTTTTTTATTTAACA TERM 1563 1009151 - 1009133 - f 78 -9.6 -3.65112 | AGCCAAACGAGAGAA GCGCTTCT GGG AGAAACGC AAAGCATAAGGGGAT TERM 1564 1009254 - 1009283 + F 77 -9.5 -3.54459 | opp_overlap 1009253 1009262, overlap 1009262 ATCCAAACCATACAT AAAAAAAAGCCTA GGGG TAGGCTTTTTTTA TTTGCAAAAGATTCA TERM 1565 1009275 - 1009262 - f 100 -6.7 -6.06529 | opp_overlap 1009254 1009262, overlap 1009253 CATACATAAAAAAAA GCCTA GGGG TAGGC TTTTTTTATTTGCAA TERM 1566 1009262 - 1009275 + F 100 -6.7 -5.95539 | opp_overlap 1009262 1009253, overlap 1009254 CATACATAAAAAAAA GCCTA GGGG TAGGC TTTTTTTATTTGCAA yhaX 1009393 - 1010259 + | HAD family phosphatase hemZ 1010373 - 1011872 + | coproporphyrinogen III oxidase TERM 1567 1011874 - 1011891 + F 100 -11.3 -5.60864 | opp_overlap 1011874 TTCCTCACGTTTAAA CACTGCG GTGA CGCAGTG TTTTTTTCATCTGTA TERM 1568 1011891 - 1011874 - f 83 -11.3 -3.57144 | opp_overlap 1011874 TTCCTCACGTTTAAA CACTGCG GTGA CGCAGTG TTTTTTTCATCTGTA TERM 1569 1012011 - 1012033 + G 75 -2 -5.40072 | overlap 1012013 GCGGCTTTGTTAGAG GAGTATGAAG ATG TTTCATGCTG TTTTTTTGAACAGGA BPUM_0931 1011948 - 1013222 + | lysine/ornithine N-monooxygenase TERM 1570 1013251 - 1013233 - f 75 -4.4 -5.1383 | opp_overlap 1013233, overlap 1013235 AATAAGAGATAAAAA GGGCCCAA ACA TAGGGCTC TTTTTCATTAGATTG TERM 1571 1013233 - 1013251 + F 81 -6.6 -4.90013 | opp_overlap 1013233 1013235 AATAAGAGATAAAAA GGGCCCAA ACA TAGGGCTC TTTTTCATTAGATTG TERM 1572 1013615 - 1013630 + G 70 -7.6 -3.72695 | AAAGTGAAGAGGATT TCCATC GAGT GATGGA TTTGATCGAGGGGAT TERM 1573 1013897 - 1013880 - g 72 -6.3 -4.4009 | overlap 1013896 TTGGAGTGGACAAAA GCTTCCT GCTG AAGAAGC GCTAAAGCTGCGCCT BPUM_0932 1013389 - 1014159 + | enoyl-CoA hydratase TERM 1574 1014354 - 1014316 - T 100 -19.2 -4.18506 | opp_overlap 1014322, overlap 1014322 TTACGCTGAAAAGAA GACAAAGGGCTAAAATAA AGA TCATTTTAGCCCTTTGCC AATAATGTGAGGCGG TERM 1575 1014322 - 1014348 + T 83 -11 -3.5882 | opp_overlap 1014316 1014322 TGAAAAGAAGACAAA GGGCTAAAATAA AGA TCATTTTAGCCC TTTGCCAATAATGTG TERM 1576 1014348 - 1014322 - T 100 -13.2 -4.45253 | opp_overlap 1014322, overlap 1014316 TGAAAAGAAGACAAA GGGCTAAAATAA AGA TCATTTTAGCCC TTTGCCAATAATGTG TERM 1577 1014366 - 1014381 + T 80 -6 -5.09426 | TGCCAATAATGTGAG GCGGGC GAAT GCCGGC TTTTTTAACGTTCAA TERM 1578 1014415 - 1014403 - T 74 -4.8 -4.88405 | opp_overlap 1014414 AACGTTCAAATAAAA GCAG CTTGC CTGC ATCATCAACGAGACG BPUM_0933 1014574 - 1014386 - | hypothetical protein yhaO 1014747 - 1015961 + | hypothetical protein TERM 1579 1018428 - 1018441 + G 75 -3.1 -5.09259 | ACCGTTAACAAATGA TCGTT ATGA AGCGA TTTTATTTTCACCTG yhaN 1015978 - 1018767 + | hypothetical protein yhaM 1018830 - 1019774 + | 3'-5' exoribonuclease YhaM TERM 1580 1019803 - 1019786 - f 70 -8.3 -3.35015 | opp_overlap 1019786 GTAATCATGTGAGAA CGTCCGC TTAT GCGGGCG TTTTTTTCATAACTT TERM 1581 1019786 - 1019803 + F 100 -10.5 -5.54894 | opp_overlap 1019786 GTAATCATGTGAGAA CGTCCGC TTAT GCGGGCG TTTTTTTCATAACTT yhaL 1019891 - 1020121 + | hypothetical protein TERM 1582 1020123 - 1020181 + T 76 -4.9 -5.01823 | gap 2, opp_overlap 1020138, overlap 1020138 ACTCGATTGCTTAAT CAGAT-GTTA-TAAAAACCCCTCTGCC TGATCAC GGCAGAGGGGTTTTTGGTGATTATTGG TTTTGTTGTTGTTGT TERM 1583 1020164 - 1020138 - T 100 -15.2 -4.8667 | opp_overlap 1020123 1020138 CAGATGTTATAAAAA CCCCTCTGCC TGATCAC GGCAGAGGGG TTTTTGGTGATTATT TERM 1584 1020138 - 1020164 + T 100 -15.2 -4.83593 | opp_overlap 1020138, overlap 1020123 CAGATGTTATAAAAA CCCCTCTGCC TGATCAC GGCAGAGGGG TTTTTGGTGATTATT prsA 1021053 - 1020175 - | peptidylprolyl isomerase PrsA BPUM_0939 1021187 - 1021300 + | hypothetical protein TERM 1585 1021322 - 1021351 + F 76 -5.7 -5.0133 | gap 1 CGCTGTGACAGAAAG GAGCCGTCCTGC CATGCGT GC-GGGCGGTTC TTTTTTCAAACGATG BPUM_0940 1021446 - 1021535 + | hypothetical protein TERM 1586 1021574 - 1021555 - T 83 -6.4 -5.09685 | opp_overlap 1021550 1021555 1021570 GAATATACACAAAAA GCTGCC CTCAAACT GGCAGC TTTTGCTTTGATCTT TERM 1587 1021555 - 1021574 + T 77 -6.4 -4.61284 | opp_overlap 1021555, overlap 1021550 1021570 GAATATACACAAAAA GCTGCC CTCAAACT GGCAGC TTTTGCTTTGATCTT BPUM_0941 1021734 - 1021588 - | hypothetical protein TERM 1588 1021866 - 1021854 - R 83 -7.7 -4.56775 | opp_overlap 1021853 1021854 AGTTGGCTTTAAAAA CCTCA TGA TGAGG ATGTTTGGTCAACTA BPUM_0942 1022374 - 1021856 - | hypothetical protein TERM 1589 1022824 - 1022788 - g 78 -5.2 -4.93968 | gap 1, opp_overlap 1022788 1022798 ATGGACAAGCAAAAA GCACAAGGCTA-CGTCA TGTT TGACGATATGCTTGCGC TTTTTGCAGGACAGT yhaI 1022608 - 1022952 + | hypothetical protein hpr 1023550 - 1022930 - | transcriptional regulator Hpr TERM 1590 1023683 - 1023704 + r 73 -10.1 -2.52946 | opp_overlap 1023683, overlap 1023682 1023681 TTTTCAACAAAAAAA GTGCGGGAT ACGC ACCCCGCAC ACTTTTGTAAACGAA TERM 1591 1023704 - 1023683 - R 100 -12.3 -5.7946 | opp_overlap 1023683 1023682 1023681 TTTTCAACAAAAAAA GTGCGGGAT ACGC ACCCCGCAC ACTTTTGTAAACGAA yhaH 1024094 - 1023738 - | hypothetical protein TERM 1592 1024359 - 1024346 - g 73 -3.8 -5.01811 | GTATTAAAGCAAAAA GCAC TTGTGT GTGC GGCAGGTGCAGGAAT BPUM_0946 1024223 - 1024414 + | hypothetical protein TERM 1593 1024431 - 1024453 + T 79 -10.7 -3.37303 | opp_overlap 1024431 AGCATGAAAAAAAAA CCTCTTCAT CTATT ATGAAGAGG TTCGATTATTTGTTA TERM 1594 1024453 - 1024431 - T 100 -10.7 -6.17184 | opp_overlap 1024431 AGCATGAAAAAAAAA CCTCTTCAT CTATT ATGAAGAGG TTCGATTATTTGTTA yhaG 1024984 - 1024466 - | hypothetical protein serC 1026189 - 1025110 - | phosphoserine aminotransferase TERM 1595 1026359 - 1026340 - R 93 -10.8 -5.06735 | opp_overlap 1026331, overlap 1026331 CAGAAATGAGAAAAA CCTCATCT ATTA AGATGAGG TAAGGCGCGTATGAA hit 1026777 - 1026349 - | histidine triad (HIT) family hydrolase TERM 1596 1026871 - 1026838 - g 100 -9.6 -5.45813 | GAGCAAAAAAGAAAA CAGGACAAGCGAAC TCCTTT GGTCGCTCATCCTG CTCCTGCAGAAGAAA BPUM_0950 1026781 - 1026933 + | hypothetical protein ecsA 1027265 - 1028005 + | ABC transporter ATP-binding protein ecsB 1027998 - 1029218 + | ABC transporter ATP-binding protein TERM 1597 1029770 - 1029759 - g 71 -3 -5.03314 | CGCATCGTCAAAAAA TGAT GAGC ATCA TAGATGATTGGGAAA ecsC 1029272 - 1029979 + | ABC transporter ATP-binding protein TERM 1598 1030009 - 1029977 - T 91 -9.2 -4.96996 | opp_overlap 1029984, overlap 1029979 1029984 TTGAAAGAAAAGAAA TAGAAAAGCCGCTG TTTGC CAGCGGCTTTTTTT TATTCATCGTAGGAA TERM 1599 1030007 - 1029979 - T 90 -11.8 -4.08474 | opp_overlap 1029984, overlap 1029977 1029984 GAAAGAAAAGAAATA GAAAAGCCGCTG TTTGC CAGCGGCTTTTT TTTATTCATCGTAGG TERM 1600 1030002 - 1029984 - T 100 -11.7 -4.95487 | opp_overlap 1029984, overlap 1029979 1029977 AAAAGAAATAGAAAA GCCGCTG TTTGC CAGCGGC TTTTTTTTATTCATC TERM 1601 1029984 - 1030002 + T 100 -11.7 -6.13503 | opp_overlap 1029984 1029979 1029977 AAAAGAAATAGAAAA GCCGCTG TTTGC CAGCGGC TTTTTTTTATTCATC amaA 1031196 - 1030009 - | aminoacylase BPUM_0955 1031235 - 1031630 + | hypothetical protein TERM 1602 1031637 - 1031651 + T 93 -7.1 -5.52384 | opp_overlap 1031637 1031635 CGACGCTAATAAAGA GCCCA TTGAT TGGGC TTTTTTTCATGAAAA TERM 1603 1031690 - 1031669 - T 100 -13.1 -5.14563 | TTTTTCATGAAAAAA GAAGTGCTG AGAG CAGCACTTC CCAGATTGTTGACAA TERM 1604 1031701 - 1031739 + T 100 -21.4 -4.18506 | opp_overlap 1031707, overlap 1031707 ACTTCCCAGATTGTT GACAAAGGGCTAAAATGA AGT TTATTTTAGCCCTTTGTC TTCTTTTCAGCGTGA TERM 1605 1031707 - 1031733 + T 100 -13.2 -4.45253 | opp_overlap 1031707, overlap 1031701 CAGATTGTTGACAAA GGGCTAAAATGA AGT TTATTTTAGCCC TTTGTCTTCTTTTCA TERM 1606 1031733 - 1031707 - T 86 -11 -3.87373 | opp_overlap 1031707 1031701 CAGATTGTTGACAAA GGGCTAAAATGA AGT TTATTTTAGCCC TTTGTCTTCTTTTCA TERM 1607 1031867 - 1031890 + T 77 -9.6 -3.52316 | opp_overlap 1031871, overlap 1031864 1031868 TTTGTCTACACGCTG AGAAGTGCTG AGAG CAGCACTTCC TTAATTGTCTGTAAC TERM 1608 1031868 - 1031889 + T 91 -13.1 -2.70907 | opp_overlap 1031871, overlap 1031867 1031864 TTGTCTACACGCTGA GAAGTGCTG AGAG CAGCACTTC CTTAATTGTCTGTAA TERM 1609 1031886 - 1031871 - T 72 -9 -3.32343 | opp_overlap 1031868 1031867 1031864 TCTACACGCTGAGAA GTGCTG AGAG CAGCAC TTCCTTAATTGTCTG BPUM_0956 1032376 - 1031891 - | hypothetical protein pbpF 1032504 - 1034639 + | penicillin-binding protein 2C hemE 1034764 - 1035822 + | uroporphyrinogen decarboxylase hemH 1035855 - 1036793 + | ferrochelatase TERM 1610 1036849 - 1036878 + G 70 -7.1 -3.81488 | CACCTTGTCATCATT GGCGGTGGC ATCACTGGTTTA GCCGCCGCC TTCTATTTGGAAAAG hemY 1036816 - 1038228 + | protoporphyrinogen oxidase TERM 1611 1038236 - 1038261 + F 91 -9.8 -4.8048 | opp_overlap 1038236 TTTCATAAATAACGA CTCCCTTTTC TGTCAT GGAAAGGGAG TTTTTCATGTGCGGA yhgD 1038403 - 1038981 + | TetR/AcrR family transcriptional regulator yhgE 1039046 - 1041355 + | hypothetical protein TERM 1612 1041364 - 1041387 + F 93 -10.4 -4.99134 | opp_overlap 1041364 AGCTTAATCAATGAA TCCTTTCTCT TAAT AGAGGAAGGA TTTTTGATTTGAAAT TERM 1613 1041387 - 1041364 - f 71 -8.2 -3.45634 | opp_overlap 1041364 AGCTTAATCAATGAA TCCTTTCTCT TAAT AGAGGAAGGA TTTTTGATTTGAAAT yhfE 1041499 - 1042548 + | M42 family peptidase TERM 1614 1042554 - 1042574 + F 73 -8.3 -3.59262 | opp_overlap 1042554, overlap 1042557 TACAGCATAAAAAAA GAACCCC ATTTATC GGGGTTC TTTCAGCGTGTAGAC TERM 1615 1042574 - 1042554 - f 100 -9 -5.69473 | opp_overlap 1042554 1042557 TACAGCATAAAAAAA GAACCCCA TTTAT CGGGGTTC TTTCAGCGTGTAGAC TERM 1616 1042743 - 1042705 - g 100 -17.8 -4.18506 | opp_overlap 1042711, overlap 1042711 TCACGCTGAAAAGAA GACAAAGTGCTAAAATCA AGA TCATTTTAGCACTTTGTC CACAATCTGAAAGAA TERM 1617 1042711 - 1042737 + G 81 -9.6 -3.87373 | opp_overlap 1042705 1042711 TGAAAAGAAGACAAA GTGCTAAAATCA AGA TCATTTTAGCAC TTTGTCCACAATCTG TERM 1618 1042737 - 1042711 - g 95 -9.6 -4.45253 | opp_overlap 1042711, overlap 1042705 TGAAAAGAAGACAAA GTGCTAAAATCA AGA TCATTTTAGCAC TTTGTCCACAATCTG TERM 1619 1042756 - 1042776 + G 100 -8.3 -4.90013 | opp_overlap 1042756 1042759 GTCCACAATCTGAAA GAACCCC ATTTATC GGGGTTC TTTTTCATTAGCTTG TERM 1620 1042776 - 1042756 - g 75 -9 -3.69354 | opp_overlap 1042756, overlap 1042759 GTCCACAATCTGAAA GAACCCCA TTTAT CGGGGTTC TTTTTCATTAGCTTG BPUM_0964 1042605 - 1042787 + | hypothetical protein gltT 1044073 - 1042784 - | DAACS family dicarboxylate/amino acid:cation symporter TERM 1621 1043849 - 1043836 - G 70 -5.3 -4.43397 | TTTCAAAATAAAGAA TGGTT CTAA AACCA AGTTTCCCTACCTTT TERM 1622 1044315 - 1044299 - R 82 -5.1 -5.36314 | opp_overlap 1044299 1044294 GAAAATACTAAAAAA CCCTTTT GTG ACAAGGG TTTTACCTTTTTACC TERM 1623 1044397 - 1044347 - R 79 -4.9 -5.24531 | gap 1 ATTTTTCAGAAAAAA TAAAAAGCAC-TTTTGACTCCAAC TGAT GAAGGAGGAAAAAAGTGCTTTTTA ATTAAATTTTTTACC yhfH 1044550 - 1044413 - | hypothetical protein TERM 1624 1044488 - 1044502 + g 76 -2.8 -5.40072 | overlap 1044490 TTCCATTAAATCATT TCCACA TTT TGTGCA TTTTTTTGAGGGCAA TERM 1625 1044971 - 1044957 - g 78 -5.6 -4.75372 | ATCATTTAGGAAAAA GCAGCG GTC CGCTTC CAATCTATGGACATA yhfI 1044707 - 1045450 + | metal-dependent hydrolase yhfJ 1045453 - 1046442 + | lipoate--protein ligase TERM 1626 1046452 - 1046473 + F 100 -10.9 -5.63103 | opp_overlap 1046452 TATTAAGAGAGACAA GCACTGCTA GAGA TAGCGGTGC TTTTTTTGATTGAAA TERM 1627 1046473 - 1046452 - f 74 -8.7 -3.70033 | opp_overlap 1046452 TATTAAGAGAGACAA GCACTGCTA GAGA TAGCGGTGC TTTTTTTGATTGAAA TERM 1628 1047458 - 1047470 + G 76 -7.7 -4.12532 | CATGAGGATGCGATG TCCTC TGT GAGGA TTTGTATATCAGGCG lcfA1 1046615 - 1048168 + | acyl-CoA synthetase TERM 1629 1048170 - 1048202 + T 86 -9.9 -4.2008 | opp_overlap 1048174, overlap 1048174 AGGAAAGTAAATAAG AAAAGGGAGTCTCTT ATG AAGAGGCTCCCTTAG TTTGTTGAGGTATAT TERM 1630 1048198 - 1048174 - T 100 -12.9 -5.03961 | opp_overlap 1048170 1048174 AAGTAAATAAGAAAA GGGAGTCTCTT ATG AAGAGGCTCCC TTAGTTTGTTGAGGT TERM 1631 1048174 - 1048198 + T 100 -15.1 -3.6914 | opp_overlap 1048174, overlap 1048170 AAGTAAATAAGAAAA GGGAGTCTCTT ATG AAGAGGCTCCC TTAGTTTGTTGAGGT yhfM 1048656 - 1048249 - | hypothetical protein TERM 1632 1048636 - 1048646 + g 75 -5.4 -4.84642 | opp_overlap 1048636 TCCAAAGATCACAAT TCCT GCA AGGA TTTTCTTCATTTCGA yhfN 1048834 - 1050114 + | M48 family peptidase TERM 1633 1050139 - 1050121 - T 100 -14.6 -6.15536 | opp_overlap 1050121 AAGCAATAAAAAAAA TCCGGCTG CAT CAGCCGGA TTTTTTTGTTCTTGT TERM 1634 1050121 - 1050139 + T 100 -14.6 -5.97979 | opp_overlap 1050121 AAGCAATAAAAAAAA TCCGGCTG CAT CAGCCGGA TTTTTTTGTTCTTGT aprE1 1051300 - 1050155 - | subtilisin TERM 1635 1051665 - 1051687 + r 81 -10.7 -3.53012 | opp_overlap 1051665, overlap 1051668 TTTGCCATTTAAAAA GAACCTGTT TCTAT AACAGGTTC TTTAAGAAGGGGAGG TERM 1636 1051687 - 1051665 - R 89 -10.7 -4.65895 | opp_overlap 1051665 1051668 TTTGCCATTTAAAAA GAACCTGTT TCTAT AACAGGTTC TTTAAGAAGGGGAGG yhfR 1052273 - 1051689 - | phosphoglycerate mutase family protein BPUM_0974 1053630 - 1052335 - | methyl-accepting chemotaxis protein TERM 1637 1052610 - 1052621 + g 82 -5.8 -5.06016 | opp_overlap 1052610, overlap 1052615 TGACGAGTTCAGACA CGGT TGAA ACCG TTTTCTTTGTGTCCT TERM 1638 1053576 - 1053598 + g 86 -2.8 -5.83211 | gap 1, overlap 1053577 1053586 GTTTTATTCCATCAT C-CTGCTTT GTGAAA AAAGCAGTG TTTTTTCTTTTCGTC TERM 1639 1053577 - 1053596 + g 74 -6.5 -4.53077 | overlap 1053576 1053586 TTTTATTCCATCATC CTGCTTT GTGAAA AAAGCAG TGTTTTTTCTTTTCG yhfW 1055254 - 1053722 - | dehydrogenase TERM 1640 1054015 - 1054028 + g 74 -4.5 -4.86731 | CACTGATCAGATTGG CAGCG ACAT TGCTG TTTTCTTTAACGAAA TERM 1641 1055455 - 1055487 + G 77 -6.3 -4.72272 | ATCAAAGTGAGCGTC CAGGTCTTGAATATA AAA TGAATCCAAGGCCTG TTTTTGATCGAGAGA TERM 1642 1055754 - 1055740 - g 82 -5 -5.40474 | AGGTTGTCAAAAAAA CAAAAG ATG CTTTCG GTTCCATTGATATTT yhxC 1055400 - 1056260 + | spore short-chain dehydrogenase TERM 1643 1056308 - 1056269 - T 100 -17.4 -5.72622 | gap 1, opp_overlap 1056280 TGGATAAACAAAAAA CTTGCGGTAAAGAGACGAG TTG CT-GTCTCTTTGCCGCAAG TAAAATCATCATGAT yhzC 1056553 - 1056323 - | hypothetical protein comK 1056843 - 1057421 + | competence transcription factor CTF TERM 1644 1057449 - 1057428 - f 100 -13 -4.48333 | opp_overlap 1057426 AGATATTAATTAAAA CCAGCGGC TGTACT GCCGCTGG ACTCCTTATGTTTCG BPUM_0979 1057581 - 1058687 + | alanine racemase TERM 1645 1059020 - 1059009 - g 75 -3 -5.14563 | overlap 1059014 CTCTGTATGAAAAAA CAAT CGCA ATTG CTGCTACTATTCACC BPUM_0980 1059000 - 1059482 + | hypothetical protein TERM 1646 1059509 - 1059487 - T 100 -12.1 -5.1848 | opp_overlap 1059487 AATCAACGTAAAAAA GCTTGGAAG GCGGA CTTCCAAGC TTTTTACATATAAAG TERM 1647 1059487 - 1059509 + T 100 -12.1 -4.70659 | opp_overlap 1059487 AATCAACGTAAAAAA GCTTGGAAG GCGGA CTTCCAAGC TTTTTACATATAAAG ydeL 1060952 - 1059513 - | GntR family transcriptional regulator TERM 1648 1061552 - 1061562 + G 71 -4.6 -4.58283 | overlap 1061557 TTCGGTTGGCTTTGG GGGC GGT GCTC TTTTTACAGCACTTC TERM 1649 1062182 - 1062197 + G 81 -5.4 -5.16071 | opp_overlap 1062182 TCTGTACGGAACCCA GATGGT GTTA ACCGTC TTTTTCTTGGTCGTT BPUM_0982 1061070 - 1062266 + | major facilitator transporter yrdF 1062332 - 1062607 + | barstar-like protein ribonuclease (barnase) inhibitor TERM 1650 1062628 - 1062618 - f 77 -6.8 -4.64144 | opp_overlap 1062619, overlap 1062619 AATAACGTTGAAAAA GCAG CCG CTGC CGCAGGCTGTTTTTT TERM 1651 1062619 - 1062637 + F 100 -6.7 -5.68039 | gap 1, opp_overlap 1062618 1062619 ATAACGTTGAAAAAG CAGCC-GC TGCC GCAGGCTG TTTTTTTATGAATTT yclN 1062773 - 1063723 + | ABC transporter ATP-binding protein yclO 1063716 - 1064666 + | ABC transporter ATP-binding protein yclP 1064657 - 1065415 + | ABC transporter ATP-binding protein yclQ 1065438 - 1066382 + | ABC transporter ATP-binding protein TERM 1652 1066411 - 1066393 - f 84 -8.8 -4.45723 | opp_overlap 1066393, overlap 1066388 AATAATAGACCAAAA GCTGCTCA TCT TGAGCGGC TTTTTTTATTGTGGA TERM 1653 1066393 - 1066411 + F 100 -11 -5.88565 | opp_overlap 1066388 1066393 AATAATAGACCAAAA GCTGCTCA TCT TGAGCGGC TTTTTTTATTGTGGA BPUM_0988 1066523 - 1067491 + | LytR family transcriptional regulator TERM 1654 1067502 - 1067520 + T 100 -12.4 -5.48213 | opp_overlap 1067500 1067499 1067497 CATAAAAAAGCATTA GCCTGCCG CTG TGGCAGGC TTTTTGTTTTGAATG BPUM_0989 1067928 - 1067560 - | hypothetical protein TERM 1655 1068238 - 1068251 + G 88 -6.7 -5.08601 | overlap 1068219 1068218 ATGCAAATGCATTCG GCCTT TGGG AAGGC TTTTTATTGACCTGG yhjE 1068075 - 1068692 + | hypothetical protein TERM 1656 1069208 - 1069235 + T 100 -6.2 -5.79595 | opp_overlap 1069210 1069212, overlap 1069210 ACCAGCGAATAAAAA AAGGCGCTCTGC CCAT GCAAAGCGTCTC TTTTTTATTTTGCGG TERM 1657 1069210 - 1069233 + T 86 -8.8 -4.53077 | opp_overlap 1069210 1069212, overlap 1069208 CAGCGAATAAAAAAA GGCGCTCTGC CCAT GCAAAGCGTC TCTTTTTTATTTTGC TERM 1658 1069233 - 1069210 - T 100 -8.8 -5.8187 | opp_overlap 1069210 1069208, overlap 1069212 CAGCGAATAAAAAAA GGCGCTCTGC CCAT GCAAAGCGTC TCTTTTTTATTTTGC TERM 1659 1069231 - 1069212 - T 75 -10 -3.0287 | opp_overlap 1069210 1069208, overlap 1069210 GCGAATAAAAAAAGG CGCTCTGC CCAT GCAAAGCG TCTCTTTTTTATTTT yhjN 1070385 - 1069240 - | ammonia monooxygenase TERM 1660 1071036 - 1071024 - H 72 -7.7 -3.71527 | CCTGAATTACTCAAA GTGCT AGA AGCAC GGCTAGCATCTAAAA TERM 1661 1071114 - 1071124 + G 79 -3.2 -5.26316 | AGGCGGTATATTGAT TGGT TTA GCCA TTTTTTATCAGATGG TERM 1662 1071754 - 1071742 - g 77 -6.3 -4.60041 | ACCCAGTTTCAAAAA CAAAC AAA GTTTG CGGTGTCCTTTGGGG BPUM_0992 1071067 - 1071906 + | M56 family unassigned peptidase TERM 1663 1072416 - 1072390 - f 84 -5.9 -5.19212 | gap 1, opp_overlap 1072390 ACGATCATGAAAAAA CTCCTTCTGCTA TTTG TGGCAG-AGGAG TTTTTTTATTTATCA TERM 1664 1072390 - 1072416 + F 100 -8.1 -6.02919 | gap 1, opp_overlap 1072390 ACGATCATGAAAAAA CTCCTTCTGCTA TTTG TGGCAGA-GGAG TTTTTTTATTTATCA TERM 1665 1072884 - 1072900 + F 72 -5.1 -4.74801 | overlap 1072885 TTTGCTTCAGGATTT TTTGCCT TTT GGGCAAG TTTTTCGTAGCATTG addB 1073170 - 1076691 + | ATP-dependent deoxyribonuclease subunit B TERM 1666 1078019 - 1078030 + G 73 -5.8 -4.57837 | CGTTTTAGACTGGCT GAGC CCAT GCTC TTTTTAAACAAATAT addA 1076669 - 1080373 + | ATP-dependent deoxyribonuclease subunit A TERM 1667 1080953 - 1080938 - g 75 -9 -3.68302 | TGAATATCGCAACAA GCCACA TTTA TGTGGC TGGAGGAAGTCAAAC TERM 1668 1081520 - 1081530 + G 73 -5.4 -4.59773 | opp_overlap 1081520, overlap 1081502 TGCCTGATGAAAAAA CAGT CAA ACTG TTTTTAGAGCTAGCC TERM 1669 1081530 - 1081520 - g 81 -5.4 -5.14563 | opp_overlap 1081502 1081520 TGCCTGATGAAAAAA CAGT CAA ACTG TTTTTAGAGCTAGCC sbcD 1080400 - 1081575 + | DNA repair exonuclease subunit D TERM 1670 1082412 - 1082402 - g 75 -3.2 -5.18995 | overlap 1082408 AATAGAAGAGAAAAA GAAG AAG CTCC ATATCGCAGAGCAGG TERM 1671 1082526 - 1082516 - g 76 -6.8 -4.57209 | ACAGGAAGCAGAAAA GCAG CTG CTGC ATCAACGAACGATCT TERM 1672 1082636 - 1082622 - g 74 -6.4 -4.52502 | overlap 1082624 CTCAAAAAGAAAGAA CAGCTG ATT CAGCTA AAAGAAATTGAACGT TERM 1673 1083403 - 1083393 - g 91 -8.2 -4.62069 | overlap 1083394 TTCTTATCTCAAAAA GCCC CTG GGGC GGAAGTCGCTGCAGC TERM 1674 1083809 - 1083789 - g 71 -3.3 -5.06414 | gap 1, overlap 1083806 TTTTTGGAAGAAAAA CAGCTAGC AAAAGA GC-AGCTG CAGACAGCGATATAC sbcC 1081572 - 1084967 + | DNA repair exonuclease subunit C TERM 1675 1085051 - 1085034 - g 72 -6.3 -4.27316 | GTGCGGAAGGCAAAA TGTCCTG CTCA CAGAACA CCACTTAACACCAAG yisB 1084987 - 1085286 + | hypothetical protein gerPF 1085560 - 1085333 - | spore germination protein PF gerPE 1086005 - 1085574 - | spore germination protein PE gerPD 1086181 - 1086005 - | spore germination protein PD gerPC 1086798 - 1086178 - | spore germination protein PC gerPB 1087057 - 1086824 - | spore germination protein PB gerPA 1087293 - 1087072 - | spore germination protein PA yisI 1087582 - 1087421 - | hypothetical protein TERM 1676 1087508 - 1087525 + g 85 -4.1 -5.45726 | GCACCTGATGGTTTC TTCGGCA TTCA TCCCGAA TTTTTTTGCGGTCTC cotH 1088799 - 1087705 - | inner spore coat protein H BPUM_1006 1089590 - 1088874 - | hypothetical protein TERM 1677 1089298 - 1089285 - G 71 -6.7 -4.10855 | overlap 1089275 1089293 1089295 AAAAGTCGTGCAAAA GCAAG AAAT CTTGC AGAAGCAAAAAAAGT TERM 1678 1089385 - 1089363 - G 75 -5.5 -4.81212 | CCCATCATAAGAAAA GCTGCCGTA AGTCA CACCGCAGC AAATGCAGATCGCAT TERM 1679 1089537 - 1089508 - G 76 -2.9 -5.27938 | ATGTGGAAAGAAAAA TCATCATTCCC GTAGAAGT GGAAATGTTGA CCGCAAATGGGATCA yisK 1089713 - 1090618 + | fumarylacetoacetate hydrolase yisL 1090711 - 1091079 + | hypothetical protein TERM 1680 1091114 - 1091088 - T 90 -9.5 -4.74103 | opp_overlap 1091088 CTTTTAATGGAAAAA GGACATTGCTT ATACG AAGCAGTGTCC TTTTTATATGCCATC TERM 1681 1091088 - 1091114 + T 100 -11.7 -4.9792 | opp_overlap 1091088 CTTTTAATGGAAAAA GGACATTGCTT ATACG AAGCAGTGTCC TTTTTATATGCCATC yisN 1091645 - 1091118 - | hypothetical protein TERM 1682 1093522 - 1093534 + G 70 -7.7 -3.6215 | opp_overlap 1093522 1093521 GCAGTTGATTGAAAC GGAAG GAG CTTCC TTTCAAGTCCCTTGG asnO 1091795 - 1093642 + | asparagine synthase (glutamine-hydrolyzing) TERM 1683 1093649 - 1093683 + F 91 -9.3 -5.1675 | overlap 1093639 GAAGCGTAATAAAGG GTCGGCTTTCTTACA TTTGT TGAAGGGAAGCCGGC TTTTTTGATACATAA TERM 1684 1094255 - 1094243 - g 76 -7.7 -4.07885 | TATTTGCGTCCAAAA GTGCT TAA AGCAC TTCCGCAGCTTTCAT BPUM_1011 1093790 - 1095307 + | phytoene dehydrogenase yisP 1096772 - 1097611 + | phytoene synthase TERM 1685 1097616 - 1097633 + T 93 -11.3 -4.96848 | opp_overlap 1097616 ATATTACGTAAAAAA GGACTGC ACCC GCAGTCC TTTTTATGTGGAAGA TERM 1686 1097633 - 1097616 - T 93 -11.3 -5.11613 | opp_overlap 1097616 ATATTACGTAAAAAA GGACTGC ACCC GCAGTCC TTTTTATGTGGAAGA yisQ 1099013 - 1097637 - | MATE family multi antimicrobial extrusion protein yisR 1099127 - 1099993 + | transcriptional regulator BPUM_1015 1100008 - 1100565 + | acetyltransferase BPUM_1016 1100629 - 1100904 + | hypothetical protein TERM 1687 1100964 - 1100975 + G 75 -5.8 -4.65032 | overlap 1100973 GTCTATTCGTTTCGC TGGC TGTT GCCA TTTATTTATGGTTTG BPUM_1017 1100933 - 1101196 + | hypothetical protein TERM 1688 1101186 - 1101204 + T 100 -9.6 -5.49568 | TTTTTTATCAAGTGG GTCCTTCA TGA TGAAGGGC TTTTTCTTTTACCTT BPUM_1018 1101726 - 1101178 - | serine O-acetyltransferase TERM 1689 1102093 - 1102079 - H 74 -5.8 -4.58773 | GCTAGTAAATGAAAA TGATAA TCT TTATCA ATTGGAGGAGTGTTT BPUM_1019 1102113 - 1103459 + | diaminobutyrate--2-oxoglutarate aminotransferase TERM 1690 1103490 - 1103524 + G 72 -9.4 -3.21354 | gap 1, opp_overlap 1103492, overlap 1103492 ATTATTTATAAATCA AAGCCAGCTTGGAAG AGAGTC CTTCCAAGC-GGCTC TTCATACATCTATCG TERM 1691 1103522 - 1103492 - g 100 -12.7 -4.15066 | gap 1, opp_overlap 1103490 1103492 TATTTATAAATCAAA GCCAGCTTGGAAGA GAGT CCTTCCAAGC-GGC TCTTCATACATCTAT TERM 1692 1103492 - 1103522 + G 86 -12 -3.1676 | gap 1, opp_overlap 1103492, overlap 1103490 TATTTATAAATCAAA GCCAGCTTGGAAG AGAGTC CTTCCAAGC-GGC TCTTCATACATCTAT BPUM_1020 1103446 - 1104942 + | diaminobutyrate decarboxylase BPUM_1021 1104939 - 1106720 + | IucA/IucC family siderophore biosynthesis protein BPUM_1022 1106717 - 1107271 + | siderophore biosynthesis protein iucD 1107246 - 1108595 + | L-lysine 6-monooxygenase (NADPH) BPUM_1024 1108609 - 1110423 + | IucA/IucC family siderophore biosynthesis protein TERM 1693 1110460 - 1110426 - T 100 -13.1 -3.29325 | opp_overlap 1110431, overlap 1110431 CTGGGAGAAGTAATA GAAAAGCTGTAGACA TCAAG TGTCTACAGCTTTTT ATATTTTACGAGAAT TERM 1694 1110431 - 1110455 + T 100 -13.7 -5.28983 | opp_overlap 1110426 1110431 AGAAGTAATAGAAAA GCTGTAGACAT CAA GTGTCTACAGC TTTTTATATTTTACG TERM 1695 1110455 - 1110431 - T 100 -13 -4.74767 | opp_overlap 1110431, overlap 1110426 AGAAGTAATAGAAAA GCTGTAGACA TCAAG TGTCTACAGC TTTTTATATTTTACG yitH 1111323 - 1110466 - | GNAT family acetyltransferase TERM 1696 1110793 - 1110805 + g 70 -2.6 -5.01732 | GATACGCTGCGCTGC TCGG TTCAT CCGG TTTTTTAGAAAGCTT TERM 1697 1111383 - 1111408 + r 75 -7.7 -4.13014 | opp_overlap 1111389 1111390, overlap 1111389 TCATAAGAAGGATGA GAAAAAGGAAA AGGC TTTCCCTTTTC TTTTCAGCGTGTAGA TERM 1698 1111402 - 1111389 - R 76 -5.3 -4.94902 | opp_overlap 1111389 1111383, overlap 1111390 GAAGGATGAGAAAAA GGAAA AGGC TTTCC CTTTTCTTTTCAGCG TERM 1699 1111389 - 1111403 + r 70 -2.8 -5.08255 | opp_overlap 1111389 1111390, overlap 1111383 GAAGGATGAGAAAAA GGAAAA GGC TTTCCC TTTTCTTTTCAGCGT TERM 1700 1111408 - 1111390 - R 70 -7.5 -3.55857 | opp_overlap 1111389 1111383, overlap 1111389 AAGGATGAGAAAAAG GAAAAGG CTTTC CCTTTTC TTTTCAGCGTGTAGA BPUM_1026 1114919 - 1111491 - | methionine synthase TERM 1701 1112137 - 1112163 + g 73 -5.1 -4.71482 | overlap 1112131 TGCTTTAATTCCAAT GCTTTTGGATG CTGTT CGGCCAAGAGC TTTTTCACCTTTCCT yitJ 1116744 - 1114903 - | bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein TERM 1702 1115967 - 1115996 + g 73 -5.1 -4.58663 | gap 1, opp_overlap 1115967 ACCCACCGATAATAC GTGCACCTTGATTT CTA AATTCGAG-TGCAC TTTTTCGGAAATAAT TERM 1703 1116798 - 1116778 - R 88 -3.3 -5.8187 | opp_overlap 1116780, overlap 1116779 1116780 TATGTAACAAAAAAA GCCTTCT GATAAGA AGAAGAC TTTTTGGCTGTATCG yitK 1117514 - 1117023 - | nucleotide-binding protein TERM 1704 1117359 - 1117376 + g 70 -5.5 -4.56775 | opp_overlap 1117348 1117351 1117359 1117361, overlap 1117362 GAAATCATCATCAGA GATGAGC ACGA GCTCTTC TTTTTCAAGAGAAAT TERM 1705 1117362 - 1117373 + g 70 -5.8 -4.40561 | opp_overlap 1117348 1117351 1117361 1117359, overlap 1117359 ATCATCATCAGAGAT GAGC ACGA GCTC TTCTTTTTCAAGAGA yitL 1117752 - 1118600 + | hypothetical protein TERM 1706 1118687 - 1118661 - f 100 -11 -5.5454 | opp_overlap 1118661 TGAAATAAAGAAAAA GGGATAAAATCA TCA TGGTTTTATCCC TTTTTTTATATTTGT TERM 1707 1118661 - 1118687 + F 100 -13.2 -5.90231 | opp_overlap 1118661 TGAAATAAAGAAAAA GGGATAAAATCA TCA TGGTTTTATCCC TTTTTTTATATTTGT yufN 1118675 - 1119799 + | lipid ABC transporter substrate-binding protein TERM 1708 1119853 - 1119864 + G 73 -7.2 -4.10612 | CTTCTTTTAGCAGTT GGCG TCAT CGCC TTTATCATTGTCAGT TERM 1709 1120176 - 1120164 - g 89 -6.3 -5.41143 | CATTGGTGAAAAAAA TGCAT CAG ATGCA AGACGGGTCGCTGCA TERM 1710 1120604 - 1120590 - g 85 -4.2 -5.50723 | TGATGAAAATAAAAA GCTGAT GGA ATCTGC AAATCAAGTATCTGT BPUM_1031 1119796 - 1121445 + | sensor histidine kinase TERM 1711 1121450 - 1121495 + T 100 -16.6 -2.95942 | opp_overlap 1121450 1121453 1121458, overlap 1121458 AACTTTCATAAATGA TAAGAAAAGCACCCTTCCC-GA TGTG TCAGGGAAGGGTGCTTTT-TTA TGGTTTGCCTGTAAA TERM 1712 1121495 - 1121450 - T 100 -16.6 -3.0169 | opp_overlap 1121450 1121458, overlap 1121453 1121458 AACTTTCATAAATGA TAAGAAAAGCACCCTTCCC-GA TGTG TCAGGGAAGGGTGCTTTT-TTA TGGTTTGCCTGTAAA TERM 1713 1121493 - 1121453 - T 100 -16.4 -3.64915 | gap 1, opp_overlap 1121450 1121458, overlap 1121450 1121458 TTTCATAAATGATAA GAAAAGCACCCTTCCC-GA TGTG TCAGGGAAGGGTGCTTTTT TATGGTTTGCCTGTA TERM 1714 1121458 - 1121488 + T 100 -16.3 -5.42265 | gap 1, opp_overlap 1121453 1121450 1121458, overlap 1121450 TAAATGATAAGAAAA GCACCCTTCCC-GA TGTG TCAGGGAAGGGTGC TTTTTTATGGTTTGC TERM 1715 1121488 - 1121458 - T 100 -16.3 -4.86902 | gap 1, opp_overlap 1121458 1121450, overlap 1121453 1121450 TAAATGATAAGAAAA GCACCCTTCCC-GA TGTG TCAGGGAAGGGTGC TTTTTTATGGTTTGC yitS 1122347 - 1121493 - | spore protein YitS yitT 1122488 - 1123330 + | hypothetical protein ipi 1123441 - 1123800 + | intracellular proteinase inhibitor BsuPI TERM 1716 1123828 - 1123853 + T 89 -10.5 -4.66938 | opp_overlap 1123831, overlap 1123831 TCATGAGAAACAGAA AAAGCTGTCCA GTGA TGGACAGCTTC TTTTATGTTAGAGAT TERM 1717 1123850 - 1123831 - T 100 -12.2 -5.24799 | opp_overlap 1123828 1123831 TGAGAAACAGAAAAA GCTGTCCA GTGA TGGACAGC TTCTTTTATGTTAGA TERM 1718 1123831 - 1123850 + T 100 -12.2 -4.44211 | opp_overlap 1123831, overlap 1123828 TGAGAAACAGAAAAA GCTGTCCA GTGA TGGACAGC TTCTTTTATGTTAGA BPUM_1035 1124052 - 1123861 - | hypothetical protein BPUM_1036 1124201 - 1124049 - | hypothetical protein yitU 1125102 - 1124290 - | HAD family phosphatase yitV 1125239 - 1126024 + | serine peptidase TERM 1719 1126113 - 1126093 - g 71 -3.3 -4.9138 | overlap 1126095 ATCATTGAAAGAAAA TATTTTAGG CGC CCTAGAACA GGTGATTGACCCTGA yitW 1126070 - 1126378 + | hypothetical protein TERM 1720 1126422 - 1126392 - f 83 -6.8 -5.16071 | opp_overlap 1126394, overlap 1126393 1126394 AAGCACTAATAAAAA TGCCTGGTATGAGT TGA ACTCATGCCAGGTT TTTTTATGAAAAAAT TERM 1721 1126421 - 1126393 - f 81 -10.3 -3.68016 | opp_overlap 1126394, overlap 1126392 1126394 AGCACTAATAAAAAT GCCTGGTATGAGT TGA ACTCATGCCAGGT TTTTTTATGAAAAAA TERM 1722 1126394 - 1126420 + F 100 -16 -5.60993 | opp_overlap 1126393 1126392 1126394 GCACTAATAAAAATG CCTGGTATGAGT TGA ACTCATGCCAGG TTTTTTTATGAAAAA TERM 1723 1126420 - 1126394 - f 93 -13.8 -2.79725 | opp_overlap 1126394, overlap 1126393 1126392 GCACTAATAAAAATG CCTGGTATGAGT TGA ACTCATGCCAGG TTTTTTTATGAAAAA yitY 1126501 - 1127946 + | major facilitator transporter TERM 1724 1128132 - 1128152 + G 70 -3.9 -4.81685 | opp_overlap 1128126 TTAGGGAAACTACCA GAGACCACT GAC AGGCGTCTC TTTTTAATCATTCAT yitZ 1127943 - 1128491 + | major facilitator transporter TERM 1725 1128493 - 1128519 + F 100 -8.1 -5.60993 | opp_overlap 1128493 AATATGAAAGATAAA TCCGCATGTCT CACGA AGATATGTGGA TTTTTTTATGAAAAA argC 1128623 - 1129666 + | N-acetyl-gamma-glutamyl-phosphate reductase TERM 1726 1129743 - 1129725 - g 73 -5.2 -4.65933 | overlap 1129726 CATTGTTAAAATAAA CGGTGACG TAT CCTCACCA AAAGGCTTTGAAGCA argJ 1129687 - 1130907 + | bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein argB 1130922 - 1131698 + | acetylglutamate kinase TERM 1727 1131939 - 1131920 - g 78 -4.3 -5.08601 | gap 1 GGACTGCAAGAAAAA GCAG-CAG AAAAA CTGGCTGC AAACAGTTCAGGGGA argD 1131695 - 1132846 + | acetylornithine aminotransferase carA 1132916 - 1133977 + | carbamoyl phosphate synthase small subunit TERM 1728 1134240 - 1134216 - g 80 -4.9 -5.10154 | overlap 1134219 ATCGAAAAGGAAAAA CCAGATGGGCT TTT AGCCAACCTTG GCGGACAGACCGCTT TERM 1729 1134988 - 1134977 - g 70 -3.6 -4.76892 | AGACGAACTCAAAAA CCCG CTCA CAGG CACAACTTATGCTAG carB1 1133970 - 1137050 + | carbamoyl phosphate synthase large subunit argF 1137047 - 1137997 + | ornithine carbamoyltransferase TERM 1730 1138031 - 1138007 - f 100 -10.8 -5.30448 | gap 1, opp_overlap 1138007 AAATAAATATAAAAA GTCCCTGACTC ATAT GAG-CAGGGAC TTTTTGCATAAAGGA TERM 1731 1138007 - 1138031 + F 90 -10.8 -4.65895 | gap 1, opp_overlap 1138007 AAATAAATATAAAAA GTCCCTGACTC ATAT GAG-CAGGGAC TTTTTGCATAAAGGA yjzC 1138100 - 1138279 + | hypothetical protein TERM 1732 1138315 - 1138333 + F 100 -13.2 -5.73978 | TGGAATAAGTCTTTA GAGGCATG TGT CATGCCTC TTTTTTCTTTATAAT yvqJ1 1138450 - 1139715 + | major facilitator transporter TERM 1733 1139729 - 1139748 + T 100 -13.6 -4.13767 | opp_overlap 1139729 AAGCAATAAAAAAAA CCCCCTGT GGCT ACAGGGGG TTTTAGCGTACCGCA TERM 1734 1139748 - 1139729 - T 100 -13.6 -6.15536 | opp_overlap 1139729 AAGCAATAAAAAAAA CCCCCTGT GGCT ACAGGGGG TTTTAGCGTACCGCA TERM 1735 1139815 - 1139777 - T 100 -14.2 -4.87291 | opp_overlap 1139783, overlap 1139783 CATTTCAAGGAAAAA GAAAAAGAGCTAAAATCA AGA TCATTTTAGCTCTTTCTC ACATTCTCTTACGTA TERM 1736 1139809 - 1139783 - T 100 -9.6 -5.67529 | opp_overlap 1139783, overlap 1139777 AAGGAAAAAGAAAAA GAGCTAAAATCA AGA TCATTTTAGCTC TTTCTCACATTCTCT TERM 1737 1139783 - 1139809 + T 81 -9.6 -3.94381 | opp_overlap 1139777 1139783 AAGGAAAAAGAAAAA GAGCTAAAATCA AGA TCATTTTAGCTC TTTCTCACATTCTCT yjzD 1140025 - 1139831 - | hypothetical protein TERM 1738 1140316 - 1140303 - g 70 -5.3 -4.57073 | CACCTTCCTCAAAAA CCAAA TGGC TTTGG CATTCTTATCCTCGG TERM 1739 1140757 - 1140734 - g 91 -10.3 -4.08216 | overlap 1140739 CGACTGCTCCGAAAA GGAAGCGGA AACGTA TCCGCTCCC AGCTTGCCCCTATCA yjaU 1140237 - 1140977 + | hypothetical protein TERM 1740 1140990 - 1141017 + F 70 -2.7 -5.10461 | opp_overlap 1140984 1140993 1140995, overlap 1140993 1140995 TGATGAATAGGATGA TAACAGCCCTT CATGGA AAGGGCTCTTC TTTTTATTCGATAAG TERM 1741 1140995 - 1141012 + F 72 -7 -3.91737 | opp_overlap 1140984 1140993 1140995, overlap 1140993 1140990 AATAGGATGATAACA GCCCTT CATGGA AAGGGC TCTTCTTTTTATTCG yjaV 1141053 - 1141628 + | hypothetical protein TERM 1742 1142413 - 1142397 - g 73 -7.3 -4.21744 | ATTGAACAAATCAAA GCCGATA ATT TATCAGC GATCGGATATGTCAC TERM 1743 1142670 - 1142656 - g 100 -6.4 -5.64274 | overlap 1142657 CGACTTATAAAAAAA CTGGCA AAC TGCCAA ATGAAAAGTGAGGAT med 1141719 - 1142681 + | positive regulator of comK TERM 1744 1142669 - 1142657 - f 74 -7.7 -3.9748 | overlap 1142656 GACTTATAAAAAAAC TGGCA AAC TGCCA AATGAAAAGTGAGGA comZ 1142692 - 1142889 + | late competence protein ComZ TERM 1745 1142893 - 1142878 - T 79 -6.1 -5.01535 | opp_overlap 1142878, overlap 1142872 GCAGAATCAGAAAAA GCCAC AGAATA GTGGC TTTTTTTTATGATAA TERM 1746 1142878 - 1142893 + T 100 -6.1 -5.9873 | opp_overlap 1142878 1142872 GCAGAATCAGAAAAA GCCAC AGAATA GTGGC TTTTTTTTATGATAA BPUM_1056 1143133 - 1142900 - | hypothetical protein fabHA 1143303 - 1144241 + | 3-oxoacyl-(acyl carrier protein) synthase III TERM 1747 1144484 - 1144461 - g 75 -2.4 -5.29782 | overlap 1144476 TACATGGAGAAAAAA GAAGCACG AAAAATGG CACGCTTC ACGCAATATGCAGTT fabF 1144263 - 1145504 + | 3-oxoacyl-(acyl carrier protein) synthase II TERM 1748 1145503 - 1145493 - f 78 -5.4 -5.03715 | opp_overlap 1145493, overlap 1145480 ATTATCTTTAAAAAA TACG AAG CGTA ATATTTCCTAAGAAG TERM 1749 1145519 - 1145544 + F 93 -11.2 -5.13473 | opp_overlap 1145518 1145519 ATATTTCCTAAGAAG GCGGCGATCT ATAATC AGATTGCCGC TTTTTTGCATATGAT TERM 1750 1145544 - 1145519 - f 74 -9.7 -2.77522 | opp_overlap 1145519, overlap 1145518 ATATTTCCTAAGAAG GCGGCGATCTA TAAT CAGATTGCCGC TTTTTTGCATATGAT yjaZ 1145582 - 1146385 + | hypothetical protein TERM 1751 1146928 - 1146916 - g 76 -2.7 -5.31877 | ATCTATCACAAAAAA CTTTC AAA AAAAG AAGCGACGAAAAAAG TERM 1752 1147376 - 1147366 - g 74 -6.8 -4.37886 | CTAGCGGCGATAAAA GGGA ATG TCCC AGCACCAGATCAACT appD 1146547 - 1147527 + | oligopeptide ABC transporter ATP-binding protein appF 1147524 - 1148546 + | oligopeptide ABC transporter ATP-binding protein TERM 1753 1149559 - 1149545 - g 91 -7 -5.46698 | overlap 1149547 TTTAAAAGTAAAAAA GTGCGC CAG GCGCTC ACACATGCCATTGAC appA 1148630 - 1150261 + | oligopeptide ABC transporter substrate-binding protein TERM 1754 1150418 - 1150444 + F 88 -8.9 -4.72986 | gap 1, opp_overlap 1150412 1150418 TGTAATGAAGACAGA GGGCTAAAA-GA AAGA TCATTTTAGCCC TTTTTCATCACAATA TERM 1755 1150444 - 1150418 - f 70 -8.9 -3.15147 | gap 1, opp_overlap 1150418, overlap 1150412 TGTAATGAAGACAGA GGGCTAAAA-GA AAGA TCATTTTAGCCC TTTTTCATCACAATA TERM 1756 1150788 - 1150799 + G 79 -3 -5.31456 | GGCTGCCAAATACCC TCAT CCTC ATGA TTTTTTCTACATTAG appB 1150490 - 1151440 + | oligopeptide ABC transporter membrane protein TERM 1757 1151686 - 1151675 - g 75 -7.2 -4.30809 | CAAGATTTATTAAAA CGGC TCCA GCCG CCAAGTGCAGAGCAT TERM 1758 1151889 - 1151903 + G 71 -2.1 -5.1244 | TTGTGGATGTTGTGT TGTCG ATCCC TGACA TTTTTCTCTTAATCA appC 1151474 - 1152373 + | oligopeptide ABC transporter membrane protein BPUM_1065 1152491 - 1153243 + | methyltransferase TERM 1759 1153348 - 1153327 - f 78 -10.2 -3.31461 | opp_overlap 1153327 TATTCATTCTGAGAA GTGCGTGT TCAATC ACACGCAC TTTCTTACGTAAATA TERM 1760 1153327 - 1153348 + F 86 -10.2 -4.2123 | opp_overlap 1153327 TATTCATTCTGAGAA GTGCGTGT TCAATC ACACGCAC TTTCTTACGTAAATA TERM 1761 1154655 - 1154645 - g 79 -3.2 -5.36018 | ACGAAAAAAAATAAA GACA AAC CGTC AGTTGCCCAGCTTGA yfiS 1153433 - 1154677 + | major facilitator transporter yjbA 1154750 - 1155502 + | hypothetical protein TERM 1762 1155494 - 1155545 + T 89 -12 -3.2511 | gap 1, opp_overlap 1155508, overlap 1155508 GAAAATGAATCAAAG GTGAATTAGAAAAAGCTTGCAGC ACATCAC GCTGCAAGCTTTTTTTA-TTTGC GTTTTCTACCTAGAC TERM 1763 1155508 - 1155532 + T 100 -11.5 -5.96894 | opp_overlap 1155508, overlap 1155494 GGTGAATTAGAAAAA GCTTGCAGC ACATCAC GCTGCAAGC TTTTTTTATTTGCGT TERM 1764 1155532 - 1155508 - T 100 -12.9 -4.98255 | opp_overlap 1155494 1155508 GGTGAATTAGAAAAA GCTTGCAGCAC ATC ACGCTGCAAGC TTTTTTTATTTGCGT trpS 1156533 - 1155538 - | tryptophanyl-tRNA synthetase TERM 1765 1156431 - 1156421 - G 74 -4 -5.00895 | TCGACGACACAAAAA TATC CGT GATA ATCATGTTGCAAATC TERM 1766 1156604 - 1156563 - R 100 -15.3 -5.0916 | TCCTCAATATAAAAA GGCTCACCCGTCACTTTTC AACA GAAAAGGGACGAATGAACC GTGGTACCACCCTTG BPUM_1069 1157209 - 1156850 - | hypothetical protein TERM 1767 1157055 - 1157040 - G 85 -4 -5.52384 | overlap 1157041 1157053 GTTTGATCAAAAAAA CCACTT TTTA AAGTGA TTAACGATAACCATA TERM 1768 1158644 - 1158630 - g 72 -6.4 -4.33274 | overlap 1158640 TGTACATGATGAAAA CGGAAA AGA CTTCCG CGATGGAATGCCTAA BPUM_1070 1157563 - 1159221 + | oligopeptide ABC transporter substrate-binding protein TERM 1769 1159241 - 1159267 + F 100 -13.2 -4.65895 | opp_overlap 1159241 CAATCTTATAGAAAA GAGAGTGTATTC TCT GAATATACTCTC TTTTTCACTGAAAGA TERM 1770 1159267 - 1159241 - f 90 -11 -4.55118 | opp_overlap 1159241 CAATCTTATAGAAAA GAGAGTGTATTC TCT GAATATACTCTC TTTTTCACTGAAAGA oppB 1159331 - 1160260 + | oligopeptide ABC transporter membrane protein oppC 1160257 - 1161288 + | oligopeptide ABC transporter membrane protein oppD 1161304 - 1162368 + | oligopeptide ABC transporter ATP-binding protein oppF 1162361 - 1163290 + | ABC transporter ATP-binding protein TERM 1771 1163298 - 1163321 + F 100 -8.9 -6.09196 | opp_overlap 1163298 1163301 AATCATAAGAGAGAA GAAGCGCTG CTACGT CAGTGCTTC TTTTTTTATTTTACA TERM 1772 1163621 - 1163648 + G 71 -8.6 -3.44792 | gap 1, overlap 1163626 1163628 TATTTCATCATGTTT CAAACTGGGATGA CAC TCATCCT-GTTTG TCTGTTTTCAATTAC TERM 1773 1163626 - 1163644 + G 70 -6 -4.33956 | overlap 1163621 1163628 CATCATGTTTCAAAC TGGGATGA CAC TCATCCTG TTTGTCTGTTTTCAA TERM 1774 1163628 - 1163642 + G 75 -8.6 -3.75733 | overlap 1163626 1163621 TCATGTTTCAAACTG GGATGA CAC TCATCC TGTTTGTCTGTTTTC BPUM_1075 1163396 - 1163683 + | hypothetical protein yjbC 1163820 - 1164398 + | GCN5-related N-acetyltransferase spx 1164592 - 1164987 + | transcriptional regulator Spx TERM 1775 1165028 - 1164997 - T 84 -4.4 -5.50925 | opp_overlap 1165003, overlap 1164998 1165003 AACTAATAGAAAAAA CGAAAAGCTGCCGA TCAT TTGGCAGCTTTTTT TATTTGTTTTCAGCC TERM 1776 1165027 - 1164998 - T 74 -7.9 -3.88115 | opp_overlap 1165003, overlap 1164997 1165003 ACTAATAGAAAAAAC GAAAAGCTGCCGA TCAT TTGGCAGCTTTTT TTATTTGTTTTCAGC TERM 1777 1165022 - 1165003 - T 86 -7.8 -4.90477 | opp_overlap 1165003, overlap 1164998 1164997 TAGAAAAAACGAAAA GCTGCCGA TCAT TTGGCAGC TTTTTTTATTTGTTT TERM 1778 1165003 - 1165022 + T 100 -10 -6.11392 | opp_overlap 1164998 1164997 1165003 TAGAAAAAACGAAAA GCTGCCGA TCAT TTGGCAGC TTTTTTTATTTGTTT yjbE 1165693 - 1165028 - | hypothetical protein mecA 1165956 - 1166621 + | adaptor protein TERM 1779 1166631 - 1166654 + F 100 -8.2 -5.38047 | opp_overlap 1166626 1166631 1166633 TCGTAACCAACAAAA GTCGATTTCT ATAG AGGAATCGGC TTTTTTATCTGAATG TERM 1780 1167210 - 1167199 - g 78 -2.2 -5.46129 | GAAGAAATCAAAAAA GCGA CACA TCAC ATTCATTTAGAATAT TERM 1781 1167293 - 1167306 + G 71 -3.1 -4.9725 | gap 1, opp_overlap 1167293 ATAAAGCGAAAAACG GCGTGA TTG TC-CGC TTTTTATATGACGAT BPUM_1080 1166707 - 1168227 + | cardiolipin synthetase TERM 1782 1168241 - 1168260 + F 100 -9.3 -5.48054 | AAAGATTGTATTTTC CCCCCTT TTTATC AAGGGGG TTTTTTCGTTTTCCT TERM 1783 1168637 - 1168616 - g 73 -7.3 -4.15106 | overlap 1168619 CATCAAGCGGGAAAA GAAGCCATT ATGA ATTGGCTTC AGCGGCTTGGGCATA TERM 1784 1169430 - 1169446 + G 73 -5.1 -4.59773 | overlap 1169432 CATCATATGTTCATG CGCTTGT CAG ACAAGGG TTTTTGCGCATGACG yjbF 1168391 - 1169551 + | competence protein TERM 1785 1170382 - 1170370 - g 81 -4.1 -5.27476 | GGGAAGAAAAGAAAA TTACC CAC GGCAA CTTTATTACATTTTT yjbG 1169532 - 1171592 + | M03 oligoendopeptidase F TERM 1786 1171601 - 1171643 + T 86 -5.7 -5.67063 | gap 1 TGAGTAATGAAAAGA CTTCTGTCAGGCGTGTGAGT GTAA ACTCAT-CTTTTGACAGGAG TTTTTTTCTCATAAA TERM 1787 1171684 - 1171663 - T 71 -6.5 -4.03995 | TTTCTCATAAAAATA GACCTCTTC GTAT GTAGAGGCC GCTCCTTATCATCAA BPUM_1083 1171869 - 1171696 - | hypothetical protein TERM 1788 1172083 - 1172110 + r 100 -13.5 -3.32769 | opp_overlap 1172087, overlap 1172087 TCGTTAAGACATAGT GAAACCGCGCT TATCCC GGCGCGGTTTC TTCGTGGTTTCAAAA TERM 1789 1172087 - 1172106 + r 82 -8.5 -4.30833 | opp_overlap 1172087, overlap 1172083 TAAGACATAGTGAAA CCGCGCT TATCCC GGCGCGG TTTCTTCGTGGTTTC TERM 1790 1172106 - 1172087 - R 72 -7.8 -3.76607 | opp_overlap 1172083 1172087 TAAGACATAGTGAAA CCGCGC TTATCCCG GCGCGG TTTCTTCGTGGTTTC TERM 1791 1172185 - 1172154 - R 84 -11 -3.70902 | opp_overlap 1172161, overlap 1172161 CTTTTTAGAGGTAAA GAAAAAACATGGGT CAGC ACCCATGTTCATTC TCACAACGATAGACA TERM 1792 1172178 - 1172161 - R 100 -9.9 -5.65927 | opp_overlap 1172161, overlap 1172154 GAGGTAAAGAAAAAA CATGGGT CAGC ACCCATG TTCATTCTCACAACG TERM 1793 1172161 - 1172178 + r 79 -9.9 -3.44146 | opp_overlap 1172161 1172154 GAGGTAAAGAAAAAA CATGGGT CAGC ACCCATG TTCATTCTCACAACG yjbH 1173078 - 1172167 - | hypothetical protein yjbI 1173473 - 1173075 - | hemoglobin TERM 1794 1173301 - 1173290 - G 70 -7.2 -3.85698 | GCTCCTCTGTATAAA GCGG GGGT CCGC CTAAATATTGCGTTA TERM 1795 1173748 - 1173727 - R 100 -10.2 -5.4251 | opp_overlap 1173727 1173744 GCGACATACAAAAAA CCGAAGAG GTTATT CTCTTCGG TTTAAGCGAAATATT TERM 1796 1173727 - 1173748 + r 83 -10.9 -3.54307 | opp_overlap 1173727, overlap 1173744 GCGACATACAAAAAA CCGAAGAGG TTAT TCTCTTCGG TTTAAGCGAAATATT yjbJ 1174520 - 1173750 - | ABC transporter ATP-binding protein yjbK 1175117 - 1174539 - | hypothetical protein yjbL 1175351 - 1175719 + | hypothetical protein yjbM 1175753 - 1176382 + | hypothetical protein ppnK 1176448 - 1177248 + | inorganic polyphosphate/ATP-NAD kinase rluA2 1177293 - 1178159 + | pseudouridylate synthase TERM 1797 1178169 - 1178196 + T 100 -8.5 -5.34555 | gap 2, opp_overlap 1178169 CTTTAAATAGAGAAA CCCGGCTACCTGC AAGC GCAGG-A-CCGGG TTTTTTATGATGTGA TERM 1798 1178196 - 1178169 - T 82 -8.5 -4.27886 | gap 2, opp_overlap 1178169 CTTTAAATAGAGAAA CCCGGCTACCTGC AAGC GCAGG-A-CCGGG TTTTTTATGATGTGA yjbP 1178944 - 1178201 - | bis(5'-nucleosyl)-tetraphosphatase PrpE yjbQ 1179107 - 1180948 + | CPA2 family monovalent cation:proton (H+) antiporter-2 TERM 1799 1181140 - 1181163 + F 100 -15.4 -5.36441 | opp_overlap 1181135 1181134 1181144 TTTGACAAATTCCAA GCCACTTTCC ATGC GGAAAGTGGC TTTTTTATATGGAAA tenA 1181196 - 1181906 + | thiaminase TERM 1800 1182163 - 1182141 - gf 73 -8.4 -3.63744 | opp_overlap 1182141, overlap 1182139 1182156 CTTTTCGCCAAAAGA GCTGCGGGAA AAA TTCCCACACC TTCATGCGGGCGTCT tenI 1181866 - 1182498 + | transcriptional regulator TenI goxB 1182482 - 1183594 + | glycine oxidase thiS 1183591 - 1183794 + | hydroxyethylthiazole phosphate biosynthesis protein thiG 1183799 - 1184566 + | thiazole synthase thiF 1184563 - 1185576 + | thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein thiDA 1185593 - 1186399 + | phosphomethylpyrimidine kinase TERM 1801 1186410 - 1186431 + F 93 -10.9 -5.14563 | opp_overlap 1186410 GATAAAAGAATCGAA CCGTCTTCT CTTG AGAGGACGG TTTTTTGATGAAAAA TERM 1802 1186431 - 1186410 - f 74 -8.7 -3.39162 | opp_overlap 1186410 GATAAAAGAATCGAA CCGTCTTCT CTTG AGAGGACGG TTTTTTGATGAAAAA fabI 1186550 - 1187326 + | enoyl-(acyl carrier protein) reductase TERM 1803 1187343 - 1187367 + F 100 -10.1 -6.23317 | CAAATAAATGATTTG CAGCATACC GAATGAG GGTATGCTG TTTTTTTATTTTTCT TERM 1804 1187661 - 1187645 - g 85 -2.1 -5.80951 | overlap 1187648 1187650 ATCGAAAAGAAAAAA GAAGCCG AGC CGCCTGC GCGTCAGCAAGTGCA yjbX 1187441 - 1188055 + | spore protein YjbX TERM 1805 1188090 - 1188060 - T 85 -9.9 -4.15044 | opp_overlap 1188068, overlap 1188068 TTGGTTTTTAACAAA TAAAAAAAGTCCC ATAGA GGGACTTTTTTTG TTAGCAGTTACGGTT TERM 1806 1188068 - 1188082 + T 100 -7.1 -5.7946 | opp_overlap 1188060 1188068 TAACAAATAAAAAAA GTCCC ATAGA GGGAC TTTTTTTGTTAGCAG TERM 1807 1188082 - 1188068 - T 100 -7.1 -6.08342 | opp_overlap 1188068, overlap 1188060 TAACAAATAAAAAAA GTCCC ATAGA GGGAC TTTTTTTGTTAGCAG cotZ 1188534 - 1188091 - | spore coat protein Z BPUM_1104 1188712 - 1188551 - | hypothetical protein cotY 1189231 - 1188740 - | spore coat protein Y TERM 1808 1189373 - 1189345 - R 79 -10.4 -3.22906 | opp_overlap 1189344 1189350, overlap 1189350 GTATTTTTATAAAAG GAAAAGCAGAGC TTTTC GCTCTGCTTTTG GACATTAGAGGATAC TERM 1809 1189368 - 1189350 - R 91 -10.3 -4.73108 | opp_overlap 1189344 1189350, overlap 1189345 TTTATAAAAGGAAAA GCAGAGC TTTTC GCTCTGC TTTTGGACATTAGAG TERM 1810 1189350 - 1189368 + r 85 -10.3 -4.14392 | opp_overlap 1189345 1189350, overlap 1189344 TTTATAAAAGGAAAA GCAGAGC TTTTC GCTCTGC TTTTGGACATTAGAG cotX 1189857 - 1189378 - | spore coat protein X cotW 1190329 - 1189946 - | spore coat protein W cotV 1190721 - 1190326 - | spore coat protein V yjcA 1190902 - 1191240 + | hypothetical protein BPUM_1110 1191273 - 1191440 + | hypothetical protein TERM 1811 1191475 - 1191450 - f 72 -4.7 -4.79373 | opp_overlap 1191456, overlap 1191455 1191456 CAATAGAAGAGAAAA CAAAAGCCGGA TTTA TCCGGTTTTTT TGTTGCCCTTTTTTT TERM 1812 1191470 - 1191455 - f 79 -4.6 -5.26907 | opp_overlap 1191456, overlap 1191450 1191456 GAAGAGAAAACAAAA GCCGGA TTTA TCCGGT TTTTTTGTTGCCCTT TERM 1813 1191469 - 1191456 - f 75 -8.1 -3.73704 | opp_overlap 1191456, overlap 1191455 1191450 AAGAGAAAACAAAAG CCGGA TTTA TCCGG TTTTTTTGTTGCCCT TERM 1814 1191456 - 1191469 + F 100 -8.1 -5.80364 | opp_overlap 1191455 1191450 1191456 AAGAGAAAACAAAAG CCGGA TTTA TCCGG TTTTTTTGTTGCCCT BPUM_1111 1191518 - 1191748 + | hypothetical protein yosA 1191833 - 1191958 + | hypothetical protein TERM 1815 1191974 - 1192003 + F 85 -9.3 -4.32857 | ACAGTAAGAAGGTGA GGGAAGCAATGGG GGAG CCTTTTGCTTTCC TTTCTCTTTGGGCAA spoVIF 1192097 - 1192354 + | spore coat assembly protein YjcC TERM 1816 1192392 - 1192352 - T 100 -12.7 -5.66229 | opp_overlap 1192356, overlap 1192356 ATGAACAACAAAAAA TAAACAACAGGCTCTCC GCTTAAA GGGGAGCCTGTTGTTTT TCTGTGAATAATGCT TERM 1817 1192356 - 1192388 + T 100 -15.7 -4.99035 | opp_overlap 1192352 1192356 ACAACAAAAAATAAA CAACAGGCTCTCC GCTTAAA GGGGAGCCTGTTG TTTTTCTGTGAATAA TERM 1818 1192388 - 1192356 - T 100 -13.5 -5.22768 | opp_overlap 1192356, overlap 1192352 ACAACAAAAAATAAA CAACAGGCTCTCC GCTTAAA GGGGAGCCTGTTG TTTTTCTGTGAATAA yjcD 1194683 - 1192371 - | UvrD Rep family helicase TERM 1819 1193247 - 1193259 + g 73 -2.6 -5.1417 | CACGCAGATATCGTT CGGT TTTGC GCCG TTTTTAATTTTCTCC TERM 1820 1194577 - 1194593 + g 87 -5.1 -5.48825 | GGTTGTCCGCAATAT GGGCA GAATAAG TGCCC TTTTTTTCCCTCGTC TERM 1821 1194753 - 1194718 - H 74 -6.3 -4.68506 | overlap 1194709 1194744 AATCAATCTTAAAAA GAAACACATCTAATC ATATCA AATGAGACGTGTTTC AAACAGTCATAATTA BPUM_1115 1194807 - 1195067 + | hypothetical protein TERM 1822 1195111 - 1195135 + T 100 -8.5 -5.50723 | opp_overlap 1195111 GATGATAACGAAAAA GCCAGGACATC ATA GATGCGCTGGC TTTTTCTTTTGGTCA TERM 1823 1195135 - 1195111 - T 93 -10.7 -4.94972 | opp_overlap 1195111 GATGATAACGAAAAA GCCAGGACATC ATA GATGCGCTGGC TTTTTCTTTTGGTCA yjcF 1195582 - 1195148 - | acetyltransferase ligT 1196104 - 1195589 - | hypothetical protein yjcH 1196897 - 1196157 - | esterase TERM 1824 1196609 - 1196598 - G 75 -5.8 -4.58395 | opp_overlap 1196589 TTCATTTGCTAAAAA GCGT TTAT ACGC TTCAAATTTTGTGCC TERM 1825 1197249 - 1197282 + H 100 -15.5 -3.6692 | opp_overlap 1197238 1197235 1197254, overlap 1197238 1197254 1197281 ATAAGAGGAAGCGAT TAAAACCCCTTCTTC TTAT GAAGAAGGGGTTTTC TGTTTTGAAATCAGA TERM 1826 1197254 - 1197277 + H 100 -15.4 -4.89567 | opp_overlap 1197238 1197235 1197254, overlap 1197238 1197249 AGGAAGCGATTAAAA CCCCTTCTTC TTAT GAAGAAGGGG TTTTCTGTTTTGAAA TERM 1827 1197277 - 1197254 - H 100 -15.4 -4.31379 | opp_overlap 1197238 1197254 1197249, overlap 1197238 1197235 AGGAAGCGATTAAAA CCCCTTCTTC TTAT GAAGAAGGGG TTTTCTGTTTTGAAA TERM 1828 1197281 - 1197297 + H 71 -3.7 -4.87291 | overlap 1197249 ATGAAGAAGGGGTTT TCTGTTT TGA AATCAGA TTTTTACTTAGGATG TERM 1829 1197493 - 1197472 - g 75 -5.1 -4.87291 | CATTCGAACGAAAAA CCCAACAAG GCAG CTTGTAGAG GATGCGATTGCTTCA TERM 1830 1197622 - 1197633 + G 73 -5.8 -4.41348 | opp_overlap 1197631 ATCAGACCTATATGG CGGT ACAT ACCG TTTGTTTGAAAACGA yjcI 1197320 - 1198438 + | cystathionine gamma-synthase TERM 1831 1198542 - 1198562 + G 100 -11.3 -4.29738 | GCATGCGTCCACCTT TCATCAAAG CAG CTTTGATGA TTTTGGTCAATATGA yjcJ 1198435 - 1199613 + | cystathionine beta-lyase TERM 1832 1199652 - 1199617 - f 91 -12.6 -3.21342 | opp_overlap 1199617, overlap 1199626 AACCAATCATGAAGA GGAGAAAAAGCCGGCA CAGC CGCCGGCTTTTTGACC TTTTTTCAACAAAAC TERM 1833 1199617 - 1199652 + F 100 -11.9 -5.00616 | opp_overlap 1199617 1199626 AACCAATCATGAAGA GGAGAAAAAGCCGGC ACAGCC GCCGGCTTTTTGACC TTTTTTCAACAAAAC TERM 1834 1199643 - 1199626 - f 93 -10.5 -4.98436 | opp_overlap 1199617, overlap 1199617 TGAAGAGGAGAAAAA GCCGGCA CAGC CGCCGGC TTTTTGACCTTTTTT TERM 1835 1199824 - 1199840 + F 100 -12.3 -6.12458 | opp_overlap 1199824 GAATCATCGTTGAAA CCCTTGC CAA GCAAGGG TTTTTTGTTTTTTTG TERM 1836 1199840 - 1199824 - f 90 -12.3 -3.56568 | opp_overlap 1199824 GAATCATCGTTGAAA CCCTTGC CAA GCAAGGG TTTTTTGTTTTTTTG TERM 1837 1200952 - 1200934 - g 82 -4.6 -5.27709 | TTAGAAAAAAATAAA GATCCACT TAT AGTAAATC AAGGAAAACAAATTG BPUM_1121 1200154 - 1200990 + | hypothetical protein TERM 1838 1200975 - 1200965 - T 74 -5.4 -4.78981 | ATCAAGGAAAACAAA TTGC TAT GCAA ACAAGTTTCCTTTAA TERM 1839 1201070 - 1201087 + T 100 -12.7 -5.12068 | opp_overlap 1201064 1201061 AATGAATATCATTAT GCCGTCC AAAT GGACGGC TTTTTGTTAACTGTA BPUM_1122 1201596 - 1201258 - | transcriptional regulator BPUM_1123 1201702 - 1202085 + | hypothetical protein BPUM_1124 1202320 - 1202508 + | hypothetical protein TERM 1840 1202510 - 1202526 + T 100 -12.3 -5.72622 | opp_overlap 1202510 GAATCATCGTTTAAA CCCTTGC CTA GCAAGGG TTTTTTGTTTGTCGA TERM 1841 1202526 - 1202510 - T 90 -12.3 -3.56568 | opp_overlap 1202510 GAATCATCGTTTAAA CCCTTGC CTA GCAAGGG TTTTTTGTTTGTCGA accA1 1203653 - 1202715 - | acetyl-CoA carboxylase carboxyltransferase subunit alpha BPUM_1126 1204132 - 1203686 - | MarR family transcriptional regulator TERM 1842 1203824 - 1203858 + g 75 -7.2 -4.28925 | overlap 1203829 GTTATGAACAGTTGT GTGACCTTTTTCTGTG AGG TGCAGAAAAAGTTCTC TTCTATTTTTTTCAT TERM 1843 1203829 - 1203853 + g 80 -8.7 -3.90967 | overlap 1203824 GAACAGTTGTGTGAC CTTTTTCTGTG AGG TGCAGAAAAAG TTCTCTTCTATTTTT TERM 1844 1204147 - 1204175 + r 74 -9.1 -3.38564 | opp_overlap 1204152, overlap 1204149 1204152 AAAAGGTTACCCTCC TACAATTCATGTA CCA TACATCAATTGTA TTATACATGAATTTG TERM 1845 1204149 - 1204190 + r 79 -4 -5.41746 | gap 1, opp_overlap 1204152, overlap 1204147 1204152 AAGGTTACCCTCCTA C-AATTCATGTACCATACA TCAAT TGTATTATACATGAATTTG TTTTTTTCACAAGTT TERM 1846 1204186 - 1204152 - R 70 -8.1 -3.29511 | opp_overlap 1204147 1204152 1204149 GTTACCCTCCTACAA TTCATGTACCATACA TCAAT TGTATTATACATGAA TTTGTTTTTTTCACA TERM 1847 1204152 - 1204186 + r 84 -5.9 -5.20328 | opp_overlap 1204152, overlap 1204147 1204149 GTTACCCTCCTACAA TTCATGTACCATACA TCAAT TGTATTATACATGAA TTTGTTTTTTTCACA TERM 1848 1204466 - 1204483 + r 93 -7 -5.60993 | opp_overlap 1204461 1204466 TAGGCAAAATTAAAA CAGACC ATGCAG GGTCTG TTTTTTTATGGGGAC TERM 1849 1204483 - 1204466 - R 79 -7 -4.68645 | opp_overlap 1204466, overlap 1204461 TAGGCAAAATTAAAA CAGACC ATGCAG GGTCTG TTTTTTTATGGGGAC TERM 1850 1204656 - 1204672 + r 100 -8.7 -6.17669 | opp_overlap 1204656 GAATCATCGTGCAAA CCTTTGC CTA GCAAGGG TTTTTTTGTTTTGTT TERM 1851 1204930 - 1204908 - R 86 -7.7 -5.0133 | opp_overlap 1204908 1204928 TACCTCGCTAAAAAA CACCCTTAC TTTTT GTTAGGGTG TTTTTACACTTATTA TERM 1852 1204908 - 1204930 + r 84 -7.7 -4.70626 | opp_overlap 1204908, overlap 1204928 TACCTCGCTAAAAAA CACCCTTAC TTTTT GTTAGGGTG TTTTTACACTTATTA BPUM_1127 1205409 - 1205014 - | hypothetical protein TERM 1853 1205815 - 1205789 - R 73 -9.5 -2.99649 | opp_overlap 1205789 AGATGTTGATACAGA GCCATTCTTGA GATAG TCAAGAGTGGC TTTTGTTGTATTTCT TERM 1854 1205789 - 1205815 + r 100 -11.7 -4.96657 | opp_overlap 1205789 AGATGTTGATACAGA GCCATTCTTGA GATAG TCAAGAGTGGC TTTTGTTGTATTTCT TERM 1855 1205863 - 1205886 + r 71 -9.6 -2.65354 | opp_overlap 1205856 1205863, overlap 1205860 TAGTGAAATGAAAAA CCACACTGTA TTTT TTCAGTGTGG TCAATTTAAGATACG TERM 1856 1205886 - 1205863 - R 91 -9.6 -5.00138 | opp_overlap 1205863 1205860, overlap 1205856 TAGTGAAATGAAAAA CCACACTGTA TTTT TTCAGTGTGG TCAATTTAAGATACG BPUM_1128 1206221 - 1206033 - | hypothetical protein BPUM_1129 1206766 - 1206347 - | hypothetical protein BPUM_1130 1206948 - 1207778 + | acetylxylan esterase cat 1207866 - 1208528 + | chloramphenicol O-acetyltransferase TERM 1857 1208566 - 1208587 + F 100 -10.2 -5.56263 | opp_overlap 1208566 ATTCTAGAAGATGAA GGCAGACT GAAATG AGTCTGCC TTTTTGTTTTGTGAT TERM 1858 1208587 - 1208566 - f 79 -10.2 -3.42013 | opp_overlap 1208566 ATTCTAGAAGATGAA GGCAGACT GAAATG AGTCTGCC TTTTTGTTTTGTGAT rapH 1208729 - 1209847 + | aspartate phosphatase response regulator H phrH 1209837 - 1210010 + | RapH phosphatase inhibitor TERM 1859 1210023 - 1210039 + F 93 -7.3 -5.66684 | opp_overlap 1210023 TAGGCAAGATTAAAA CAGACTT TAA GAGTCTG TTTTTTTATGAATTA TERM 1860 1210039 - 1210023 - f 75 -6.6 -4.43681 | opp_overlap 1210023 TAGGCAAGATTAAAA CAGACT TTAAG AGTCTG TTTTTTTATGAATTA BPUM_1134 1210120 - 1210947 + | hypothetical protein TERM 1861 1210989 - 1210965 - T 100 -7.9 -5.38549 | opp_overlap 1210970 1210972, overlap 1210970 GTGAAAGAAGAAAAA GAAAAGCCCCT GAA AAGGGCTTTTT TAATTTAATTCATGA TERM 1862 1210970 - 1210984 + T 83 -5.6 -5.41359 | opp_overlap 1210965 1210970, overlap 1210972 AGAAGAAAAAGAAAA GCCCCT GAA AAGGGC TTTTTTAATTTAATT TERM 1863 1210984 - 1210970 - T 100 -7.8 -5.44638 | opp_overlap 1210970 1210972, overlap 1210965 AGAAGAAAAAGAAAA GCCCCT GAA AAGGGC TTTTTTAATTTAATT BPUM_1135 1211864 - 1210989 - | LysR family transcriptional regulator racX 1212586 - 1211888 - | aspartate racemase BPUM_1137 1213252 - 1212689 - | acetyltransferase BPUM_1138 1214158 - 1213262 - | LysR family transcriptional regulator TERM 1864 1214900 - 1214885 - g 76 -2.5 -5.27335 | GCTGCGAAACAAAAA GGCGA TACAAT TCACC TTGTTTTTTGGCTTT BPUM_1139 1214286 - 1215440 + | major facilitator transporter BPUM_1140 1215482 - 1215901 + | GNAT family acetyltransferase TERM 1865 1215928 - 1215943 + F 79 -6.8 -4.7339 | TCTTCTCGTTTACTC GGCCCT CTAT AGGGTC TTTTTGCGGTTTCTT TERM 1866 1216426 - 1216411 - g 91 -4.6 -5.60993 | GCGGGCAGAAAAAAA GCTGTC TCTT GTCAGC GATGATATTGAACGT rapA1 1216031 - 1217164 + | aspartate phosphatase response regulator phrA1 1217154 - 1217291 + | RapA phosphatase inhibitor PhrA1 TERM 1867 1217311 - 1217299 - f 91 -9.1 -4.8622 | opp_overlap 1217299 CTGCTTAAGTAAAAA GCCCT TTA AGGGC TTTTAGATTGTTGAC TERM 1868 1217299 - 1217311 + F 83 -9.1 -4.36127 | opp_overlap 1217299 CTGCTTAAGTAAAAA GCCCT TTA AGGGC TTTTAGATTGTTGAC TERM 1869 1217324 - 1217362 + F 100 -15.6 -4.18506 | opp_overlap 1217330, overlap 1217330 GGCTTTTAGATTGTT GACAAAGGGCTAAAATGA TCT TGATTTTAGCTCTTTGTC TTCTTTTCAGCGTGA TERM 1870 1217330 - 1217356 + F 78 -7.4 -4.45253 | opp_overlap 1217330, overlap 1217324 TAGATTGTTGACAAA GGGCTAAAATGA TCT TGATTTTAGCTC TTTGTCTTCTTTTCA TERM 1871 1217493 - 1217505 + F 88 -9.1 -4.8048 | opp_overlap 1217493 GTCTACACGCTGAAA GCCCT TTA AGGGC TTTTTAATATAAAAC TERM 1872 1217505 - 1217493 - f 74 -9.1 -3.59262 | opp_overlap 1217493 GTCTACACGCTGAAA GCCCT TTA AGGGC TTTTTAATATAAAAC BPUM_1143 1217533 - 1217823 + | hypothetical protein yosT 1217998 - 1218447 + | DNA gyrase inhibitor BPUM_1145 1218547 - 1219176 + | hypothetical protein TERM 1873 1219181 - 1219203 + F 100 -7.1 -5.93809 | opp_overlap 1219181 ATCGTTCATAGAGAA GAAATCACA GTTGA TGTGGTTTC TTTTTTTTGTGAGAC alr2 1219341 - 1220522 + | alanine racemase TERM 1874 1220590 - 1220567 - T 74 -9.6 -3.15768 | gap 1, opp_overlap 1220564 1220563 1220567 ATGAAAATCCGAATA GCCCCCTTTAC ATG GCAA-GGGGGC TAACTTTCAAGAATT TERM 1875 1220567 - 1220590 + T 71 -9.6 -2.64651 | opp_overlap 1220567, overlap 1220564 1220563 ATGAAAATCCGAATA GCCCCCTT TACATGGC AAGGGGGC TAACTTTCAAGAATT BPUM_1147 1221716 - 1220604 - | alcohol dehydrogenase TERM 1876 1221820 - 1221847 + H 71 -6.5 -4.16301 | opp_overlap 1221820 GATTGTAGGATGAAA GTTTTTTTGTT TCAATC AGCAAAAAAAC TTATTTGTATAGGTT TERM 1877 1222385 - 1222400 + G 78 -4 -5.1417 | AGTTATTTTATCCAA TATCGT TCAT ACGGTA TTTTTGGTTTTATCA BPUM_1148 1221929 - 1222543 + | TetR family transcriptional regulator TERM 1878 1222729 - 1222749 + F 100 -9.8 -5.50723 | opp_overlap 1222729 CATATAATGGAAAAA CTGCTGAT GATAG ATCAGCAG TTTTTGTTTTCGTAA TERM 1879 1222749 - 1222729 - f 91 -9.8 -4.79756 | opp_overlap 1222729 CATATAATGGAAAAA CTGCTGAT GATAG ATCAGCAG TTTTTGTTTTCGTAA hag2 1222940 - 1223842 + | flagellin TERM 1880 1223849 - 1223863 + F 100 -8.5 -6.13503 | opp_overlap 1223848 CTTCGTTAATGACAG GCCCC TTTAT GGGGC TTTTTTTTCTTCCTA TERM 1881 1224634 - 1224617 - g 70 -2.7 -5.0809 | overlap 1224620 AATAAAGCACAAAAA TTAGATG TGAA CATCGAA GCAATGTCTTCTACA hag3 1224113 - 1225030 + | flagellin TERM 1882 1225037 - 1225051 + F 100 -8.5 -5.99154 | opp_overlap 1225036 CTTCGTTAATGACAG GCCCC TTTAT GGGGC TTTTTTTGTTTCCTA TERM 1883 1225169 - 1225154 - f 70 -7.6 -3.54744 | opp_overlap 1225156 AAAATAAACCGATAA TACCCT TGTC AGGGTA TATAGACCCTAGAAC hag4 1225229 - 1226134 + | flagellin TERM 1884 1226141 - 1226156 + F 100 -7.5 -5.70829 | opp_overlap 1226140 CTACGTTAATGACAG GCCCC TTTTAT GGGGC TTTTTTTATGCTGTT TERM 1885 1226370 - 1226358 - f 85 -4.9 -5.61596 | opp_overlap 1226358 AGGCTTACAAAAAAA TTCTA ATT TAGAA CTTTTGGACAAGGAT hag5 1226421 - 1227320 + | flagellin TERM 1886 1227342 - 1227328 - T 90 -8.5 -4.87291 | opp_overlap 1227328 TACGTTAATCAAAAA GCCCC ATTAA GGGGC TTTTTTTGTTTCAAT TERM 1887 1227328 - 1227342 + T 100 -8.5 -5.96894 | opp_overlap 1227328 TACGTTAATCAAAAA GCCCC ATTAA GGGGC TTTTTTTGTTTCAAT BPUM_1153 1228813 - 1227353 - | FAD dependent dehydrogenase TERM 1888 1229437 - 1229419 - g 71 -2.4 -5.11063 | gap 1 AGTATTCAAGAAAAA GTGCACG AGGTAG CG-GCAC ATTCAGAGGAGCTCT BPUM_1154 1229059 - 1229862 + | chemotaxis sensory transducer TERM 1889 1229867 - 1229884 + T 100 -9.9 -5.43414 | opp_overlap 1229867 TGTCAACGTAAAAAA CGAATCC AAGA GGATTCG TTTTTTGTATGTCGT TERM 1890 1229884 - 1229867 - T 93 -9.9 -5.15969 | opp_overlap 1229867 TGTCAACGTAAAAAA CGAATCC AAGA GGATTCG TTTTTTGTATGTCGT BPUM_1155 1230294 - 1229899 - | hypothetical protein BPUM_1156 1230514 - 1231137 + | hypothetical protein xkdA 1231702 - 1231154 - | hypothetical protein TERM 1891 1231764 - 1231752 - H 76 -4.8 -5.10933 | TGACGTAAAAGAAAA GTCC ATATA GGAC TAAATAGCTAAATGA TERM 1892 1232727 - 1232745 + G 82 -6 -4.98911 | opp_overlap 1232714, overlap 1232718 CATGTACGCCTCGTC CAGCAG GCGCTTG CTGCTG TTTATTTTTATCCTG TERM 1893 1232820 - 1232809 - g 91 -7.2 -5.28176 | TTTATGGAGAAAAAA CGGC GAAC GCCG TAGCGCGTTTTCAGC xlyA 1232013 - 1232912 + | N-acetylmuramoyl-L-alanine amidase TERM 1894 1232898 - 1232888 - T 72 -5.4 -4.5528 | opp_overlap 1232888, overlap 1232879 TAAAACGAAGGAAAA GCTT CTG AAGC TGTTAAGTCAGTGAG TERM 1895 1233008 - 1233019 + T 76 -3 -5.36689 | CAAACTGAACATATC TCAA TTGT TTGA TTTTCTTTTTCATTT TERM 1896 1233122 - 1233099 - T 93 -13.9 -2.84586 | opp_overlap 1233099, overlap 1233096 GTGAAAATGGAAGCA GGACGCGGA TTTTGT TCCGCGTCC TTTAGTGTAATCAAG TERM 1897 1233099 - 1233122 + T 100 -13.9 -3.86202 | opp_overlap 1233096 1233099 GTGAAAATGGAAGCA GGACGCGGA TTTTGT TCCGCGTCC TTTAGTGTAATCAAG spoIISB 1233303 - 1233133 - | stage II sporulation membrane protein SB TERM 1898 1233191 - 1233227 + gT 72 -8.8 -3.31361 | opp_overlap 1233215 TTTTTGAAAATACGC TCAGTATGGGGGCTTA CCTTA TAATCCGCCATGCTGA TATGTTGCTTTTTCT spoIISA 1234048 - 1233278 - | stage II sporulation membrane protein SA TERM 1899 1234161 - 1234177 + r 86 -10.9 -3.93782 | opp_overlap 1234161 AGGCAAATAAAAAAA GACCTGT CAG ACAGGTC TTTGATATTAGATAA TERM 1900 1234177 - 1234161 - R 100 -10.9 -5.96894 | opp_overlap 1234161 AGGCAAATAAAAAAA GACCTGT CAG ACAGGTC TTTGATATTAGATAA pit 1235183 - 1234185 - | PiT family inorganic phosphate transporter ykaA 1235816 - 1235199 - | phosphate transport regulator TERM 1901 1235945 - 1235963 + r 74 -6 -4.56597 | opp_overlap 1235945 1235962, overlap 1235947 TTATTCTGACCTAAA GATGTGTT CTC AACACACC TTTTTCAGAAAGGAG TERM 1902 1235963 - 1235945 - R 73 -8.2 -3.65351 | opp_overlap 1235945 1235947, overlap 1235962 TTATTCTGACCTAAA GATGTGTT CTC AACACACC TTTTTCAGAAAGGAG TERM 1903 1236015 - 1235995 - R 78 -3.2 -5.48163 | gap 1 AAAGAAATGAAAAAA GCGG-TCCA TTTT TGGCGCCGC TTAAAGCTTAAGAAG BPUM_1163 1236481 - 1236023 - | hypothetical protein ggt 1236709 - 1238460 + | gamma-glutamyltransferase TERM 1904 1238479 - 1238504 + F 100 -9.1 -5.7946 | gap 1, opp_overlap 1238479 1238483 CATTTCCCGGGAAAA GAAACGCC-TCT TCA GGATGGCGTTTC TTTTTTTATTAAAAA TERM 1905 1238504 - 1238479 - f 79 -8.4 -4.07885 | gap 1, opp_overlap 1238479, overlap 1238483 CATTTCCCGGGAAAA GAAACGCC-TC TTCAG GATGGCGTTTC TTTTTTTATTAAAAA BPUM_1165 1238495 - 1238701 + | hypothetical protein BPUM_1166 1238787 - 1239254 + | PTS family fructose/mannitol porter component IIA BPUM_1167 1239309 - 1240682 + | PTS family galactitol (gat) porter component IIC BPUM_1168 1240702 - 1240980 + | PTS family galactitol (gat) porter component IIB BPUM_1169 1241042 - 1241488 + | hypothetical protein gutB 1241485 - 1242516 + | L-iditol 2-dehydrogenase TERM 1906 1242554 - 1242574 + F 85 -6.1 -5.44119 | opp_overlap 1242559, overlap 1242546 AAGAGAAGTTCTTTA GAAAAGGGC TTT GCCTTTCTC TTTTTTTCAGATAAA BPUM_1171 1242699 - 1243682 + | pyruvate dehydrogenase (acetyl-transferring) E1 component alpha subunit BPUM_1172 1243699 - 1244694 + | pyruvate dehydrogenase (acetyl-transferring) E1 component beta subunit BPUM_1173 1244712 - 1246037 + | branched-chain alpha-keto acid dehydrogenase subunit E2 TERM 1907 1246335 - 1246346 + G 89 -7.2 -5.06414 | ATTGAAAAGCTCAGA GGCG GGAT CGCC TTTTTATTAAAGCAA TERM 1908 1246764 - 1246750 - g 75 -5.6 -4.65078 | ATATCGCGAAGAAAA CCACTG TGA CAGAGG TGACGGAAAGCGAAG BPUM_1174 1246050 - 1247432 + | dihydrolipoyl dehydrogenase BPUM_1175 1247458 - 1248159 + | short chain dehydrogenase TERM 1909 1248256 - 1248236 - g 71 -6.8 -4.17048 | opp_overlap 1248237 CGTTTTTTAAAAGAA GGGCACAG AGTGG CTGTGTCC GATATAGATGAACAA TERM 1910 1248310 - 1248293 - g 87 -4.9 -5.42259 | gap 1, opp_overlap 1248299 TCACTTTTAAAAAAA CAGCA-CT CTC AGCTGCTG ACATTTCAAGCTGAC ywfD 1248149 - 1248904 + | short chain dehydrogenase TERM 1911 1248909 - 1248928 + F 70 -2.8 -5.09245 | opp_overlap 1248909, overlap 1248903 ATACAGAGTGAAAAA GAGCGG AGAGGTAA TCGCTC TTTTTGTCATTTTCA TERM 1912 1249048 - 1249035 - g 71 -6.7 -4.183 | TGAATTGGGAAGAAA GACGA CAGC TCGTC AAAGTTGCTCATCTT BPUM_1177 1249016 - 1249972 + | transcriptional regulator BPUM_1178 1250052 - 1250366 + | hypothetical protein TERM 1913 1250389 - 1250364 - T 85 -4.7 -5.50925 | overlap 1250366 1250380 AAGCAATATAAAAAA TAGCAGAGC TGATTAAC GCTCTGCTT CAGCGTGTAGACAAA TERM 1914 1250387 - 1250366 - T 78 -7.3 -4.36863 | overlap 1250364 1250380 GCAATATAAAAAATA GCAGAGC TGATTAAC GCTCTGC TTCAGCGTGTAGACA TERM 1915 1250548 - 1250527 - T 100 -7.3 -6.08342 | opp_overlap 1250527 GAAGAAAGAAAAAAA GCAGAGC TGATTAGC GCTCTGC TTTTTTGTGTGCTCT TERM 1916 1250527 - 1250548 + T 91 -7.3 -5.40625 | opp_overlap 1250527 GAAGAAAGAAAAAAA GCAGAGC TGATTAGC GCTCTGC TTTTTTGTGTGCTCT potE 1251862 - 1250537 - | APC family amino acid-polyamine-organocation transporter TERM 1917 1252829 - 1252815 - g 78 -4.2 -5.09225 | overlap 1252817 ATGTGATCGAAAAAA CGGAAG GAC CTTCTG AACGTTCAGGCAGAG gloA 1252181 - 1253137 + | lactoylglutathione lyase TERM 1918 1253214 - 1253176 - Tf 100 -21.4 -3.09004 | opp_overlap 1253176 1253182, overlap 1253182 TGACGCTGAAAAGGA GAAAAAGGGCTAAAATCA TTT TGATTTTAGCCCTTTTCC TTTTGCGTTAGGAAC TERM 1919 1253176 - 1253214 + TF 100 -19.2 -4.27316 | opp_overlap 1253176 1253182, overlap 1253182 TGACGCTGAAAAGGA GAAAAAGGGCTAAAATCA TTT TGATTTTAGCCCTTTTCC TTTTGCGTTAGGAAC TERM 1920 1253182 - 1253208 + TF 100 -16.8 -4.69549 | opp_overlap 1253176 1253182, overlap 1253176 TGAAAAGGAGAAAAA GGGCTAAAATCA TTT TGATTTTAGCCC TTTTCCTTTTGCGTT TERM 1921 1253208 - 1253182 - Tf 100 -16.8 -5.09245 | opp_overlap 1253182 1253176, overlap 1253176 TGAAAAGGAGAAAAA GGGCTAAAATCA TTT TGATTTTAGCCC TTTTCCTTTTGCGTT htrA 1254538 - 1253222 - | heat shock protein HtrA TERM 1922 1253419 - 1253442 + gF 76 -6.6 -4.45117 | overlap 1253421 ACTTTAAGCCGGCTT TGGCGGCAGG TGAG CCTGCGGCGA TTTCTTTGACGTATA TERM 1923 1253421 - 1253440 + gF 71 -9.2 -2.55085 | overlap 1253419 TTTAAGCCGGCTTTG GCGGCAGG TGAG CCTGCGGC GATTTCTTTGACGTA BPUM_1182 1254521 - 1254694 + | hypothetical protein proC 1254698 - 1255519 + | pyrroline-5-carboxylate reductase TERM 1924 1255536 - 1255511 - f 74 -7.7 -3.93638 | opp_overlap 1255511 AACGAAGCGGACAAA CACCACTAA AGACATAG TTAGTGGTG TTTTATTTGTTAAAA TERM 1925 1255511 - 1255536 + F 89 -7.7 -5.09762 | opp_overlap 1255511 AACGAAGCGGACAAA CACCACTAA AGACATAG TTAGTGGTG TTTTATTTGTTAAAA dppA 1255703 - 1256533 + | M55 family D-aminopeptidase dppB 1256552 - 1257487 + | peptide ABC transporter membrane protein dppC 1257484 - 1258446 + | peptide ABC transporter membrane protein dppD 1258454 - 1259461 + | peptide ABC transporter ATP-binding protein TERM 1926 1260670 - 1260655 - g 91 -5.4 -5.68489 | overlap 1260665 GAGAATAAGAAAAAA GCTGAA GCCA TCCAGC AGCAGCTGAAAGAAG dppE 1259461 - 1261083 + | peptide ABC transporter ATP-binding protein TERM 1927 1261119 - 1261098 - f 84 -8.8 -4.51777 | opp_overlap 1261098 1261096, overlap 1261092 ATATTAGAATCAAAA GACGCTTT GAAATA AAAGCGTC TGTTCCTTTATTTGT TERM 1928 1261098 - 1261119 + F 74 -8.8 -3.46146 | opp_overlap 1261092 1261098, overlap 1261096 ATATTAGAATCAAAA GACGCTTT GAAATA AAAGCGTC TGTTCCTTTATTTGT ykfA 1261195 - 1262136 + | U61 family carboxypeptidase ykfB 1262133 - 1263212 + | L-alanine-DL-glutamate epimerase TERM 1929 1263574 - 1263564 - g 74 -6.8 -4.36914 | TCGTTTGTCAGAAAA GAGC CAT GCTC TATCGAAACGGGCAA ykfC 1263212 - 1264129 + | hydrolase BPUM_1192 1264119 - 1265087 + | oligopeptide ABC transporter ATP-binding protein TERM 1930 1265104 - 1265137 + T 91 -8.9 -5.1675 | gap 1, opp_overlap 1265104 AATAGATAGAAAAAA GCCAGCAAGTAG-ACA AGC TGTTCTACACGCTGGC TTTTTTAGTGGATGA TERM 1931 1265137 - 1265104 - T 100 -11.1 -5.46276 | gap 1, opp_overlap 1265104 AATAGATAGAAAAAA GCCAGCAAGTAG-ACA AGC TGTTCTACACGCTGGC TTTTTTAGTGGATGA BPUM_1193 1266007 - 1265126 - | N-dimethylarginine dimethylaminohydrolase TERM 1932 1266096 - 1266083 - H 72 -5.3 -4.52857 | ATTTCCGATAGAAAA TCTCT CACG AGAGA CTAAAGCAAAAAGTT TERM 1933 1266120 - 1266109 - H 70 -3 -5.02715 | overlap 1266110 AGACTAAAGCAAAAA GTTT AGAC AAAC CTAAAAGAATAGTGT BPUM_1194 1266184 - 1266708 + | acyl-CoA thioester hydrolase TERM 1934 1266729 - 1266712 - f 70 -4.9 -4.57569 | gap 1, opp_overlap 1266712 CCATGGGCGTAAAAA TCACC-CT TTA AGCGGTGA TTTTTTTCTAGGGTG TERM 1935 1266712 - 1266729 + F 85 -4.9 -5.626 | gap 1, opp_overlap 1266712 CCATGGGCGTAAAAA TCACC-CT TTA AGCGGTGA TTTTTTTCTAGGGTG BPUM_1195 1266823 - 1267149 + | PadR family transcriptional regulator BPUM_1196 1267863 - 1267663 - | hypothetical protein TERM 1936 1267939 - 1267911 - H 82 -8.2 -4.21974 | gap 1, opp_overlap 1267918, overlap 1267913 1267915 GCACGATGTAATAAA CAGA-GCACATCC CATC GGATGTGCTTCAG CGTGTAGACAAACCC TERM 1937 1267936 - 1267913 - H 78 -9.6 -3.70709 | opp_overlap 1267918, overlap 1267911 1267915 ACGATGTAATAAACA GAGCACATCC CATC GGATGTGCTT CAGCGTGTAGACAAA TERM 1938 1267934 - 1267915 - H 90 -12.2 -3.42809 | opp_overlap 1267918, overlap 1267913 1267911 GATGTAATAAACAGA GCACATCC CATC GGATGTGC TTCAGCGTGTAGACA TERM 1939 1268102 - 1268064 - g 100 -19.2 -4.18506 | opp_overlap 1268070, overlap 1268070 TCACGCTGAAAAGAA GACAAAGGGCTAAAATCA AGA TCATTTTAGCCCTTTGTC AACAATCTGAGCACA TERM 1940 1268096 - 1268070 - g 100 -11 -4.45253 | opp_overlap 1268070, overlap 1268064 TGAAAAGAAGACAAA GGGCTAAAATCA AGA TCATTTTAGCCC TTTGTCAACAATCTG TERM 1941 1268070 - 1268096 + G 88 -11 -3.87373 | opp_overlap 1268064 1268070 TGAAAAGAAGACAAA GGGCTAAAATCA AGA TCATTTTAGCCC TTTGTCAACAATCTG TERM 1942 1268113 - 1268132 + G 89 -6.4 -5.35224 | TTGTCAACAATCTGA GCACATCC CATC GAATGTGC TTTTCTTTTTCTAAA BPUM_1197 1267931 - 1268146 + | hypothetical protein BPUM_1198 1268219 - 1268707 + | hypothetical protein TERM 1943 1269208 - 1269195 - g 100 -5.3 -6.04324 | TGAAAAAAGAAAAAA CCATT TCAA AATGG GACCAAATCATTGAT BPUM_1199 1268726 - 1269271 + | acetyltransferase TERM 1944 1269285 - 1269248 - T 84 -11.5 -3.37879 | gap 1, opp_overlap 1269253, overlap 1269253 ATCAATCGCAACGAA GAAAACGGCTC-GCTTAC AAA ATAAGCAGAGCCGTTTTT TTATATCCGCTGTTC TERM 1945 1269280 - 1269253 - T 100 -11.4 -4.78572 | gap 1, opp_overlap 1269253, overlap 1269248 TCGCAACGAAGAAAA CGGCTC-GCTTAC AAA ATAAGCAGAGCCG TTTTTTTATATCCGC TERM 1946 1269253 - 1269280 + T 100 -10.7 -5.71712 | gap 1, opp_overlap 1269248 1269253 TCGCAACGAAGAAAA CGGCTC-GCTTA CAAAA TAAGCAGAGCCG TTTTTTTATATCCGC ada 1270329 - 1269286 - | methylated-DNA--protein-cysteine methyltransferase BPUM_1201 1270635 - 1270501 - | hypothetical protein BPUM_1202 1271031 - 1271360 + | DMT superfamily drug/metabolite transporter ykkD 1271357 - 1271671 + | DMT superfamily drug/metabolite transporter TERM 1947 1271706 - 1271669 - T 95 -14.4 -3.19038 | opp_overlap 1271672 1271677, overlap 1271672 1271677 TTGAAAATCATTGAA TAAGAAAAGGCTGGCA GATAGA TGCCAGCCTTTTGTTA CATCGAATGATGATT TERM 1948 1271672 - 1271703 + T 83 -11.7 -3.07113 | opp_overlap 1271669 1271672 1271677, overlap 1271677 AAAATCATTGAATAA GAAAAGGCTGGCA GATAGA TGCCAGCCTTTTG TTACATCGAATGATG TERM 1949 1271703 - 1271672 - T 86 -11.7 -3.72527 | opp_overlap 1271672 1271677, overlap 1271669 1271677 AAAATCATTGAATAA GAAAAGGCTGGCA GATAGA TGCCAGCCTTTTG TTACATCGAATGATG TERM 1950 1271677 - 1271698 + T 100 -11.6 -4.67982 | opp_overlap 1271672 1271669 1271677, overlap 1271672 CATTGAATAAGAAAA GGCTGGCA GATAGA TGCCAGCC TTTTGTTACATCGAA TERM 1951 1271698 - 1271677 - T 100 -11.6 -4.91084 | opp_overlap 1271677 1271672, overlap 1271672 1271669 CATTGAATAAGAAAA GGCTGGCA GATAGA TGCCAGCC TTTTGTTACATCGAA BPUM_1204 1271925 - 1271704 - | hypothetical protein purU 1272052 - 1272954 + | formyltetrahydrofolate deformylase TERM 1952 1273234 - 1273199 - gf 100 -12.9 -4.21194 | gap 1, opp_overlap 1273192 1273199 TGGTACCACGGAAAA TCCCTTTTTCGTCCTT TACAT AAGGA-GAAAAAGGGA TTTTTTTGTGCCTAA TERM 1953 1273199 - 1273234 + GF 100 -12.9 -5.64274 | gap 1, opp_overlap 1273199, overlap 1273192 TGGTACCACGGAAAA TCCCTTTTTCGTCCTT TACAT AAGGA-GAAAAAGGGA TTTTTTTGTGCCTAA BPUM_1206 1273125 - 1273310 + | hypothetical protein TERM 1954 1273500 - 1273488 - gf 70 -6.9 -3.78026 | overlap 1273486 CTTAAAGGGAAAACA GGCAG CCG CCGCC GTTGGTCAGGGCTTG proB 1273273 - 1274370 + | gamma-glutamyl kinase proA1 1274383 - 1275633 + | gamma-glutamyl phosphate reductase TERM 1955 1275631 - 1275679 + F 73 -2.6 -5.24799 | opp_overlap 1275625, overlap 1275643 CAAATAAGAGAATCA TGAATTCAAAAAGAGAGTCT TGTGACAAT AGGCTCTCTTTTTCCTTTCA TTTTTGTATTTCTCC TERM 1956 1275643 - 1275667 + F 73 -3.6 -5.05577 | overlap 1275631 TCATGAATTCAAAAA GAGAGTCT TGTGACAAT AGGCTCTC TTTTTCCTTTCATTT rapA2 1275756 - 1276892 + | aspartate phosphatase response regulator phrA2 1276882 - 1277016 + | phosphatase RapA inhibitor PhrA2 TERM 1957 1277013 - 1277041 + F 74 -9.8 -2.76696 | gap 1, opp_overlap 1277019, overlap 1277019 GCAGCATGACATCAT CTAAAA-GCCCTT ATTA AAGGGCTTTTTAG GTTGTTGACAAAGGG TERM 1958 1277034 - 1277019 - f 83 -9 -4.22652 | opp_overlap 1277019 1277013 TGACATCATCTAAAA GCCCTT ATTA AAGGGC TTTTTAGGTTGTTGA TERM 1959 1277019 - 1277034 + F 88 -9 -4.8143 | opp_overlap 1277019, overlap 1277013 TGACATCATCTAAAA GCCCTT ATTA AAGGGC TTTTTAGGTTGTTGA TERM 1960 1277048 - 1277086 + F 100 -21.4 -4.18506 | opp_overlap 1277054, overlap 1277054 GCTTTTTAGGTTGTT GACAAAGGGCTAAAATGA TCT TTATTTTAGCCCTTTGTC TTCTTTTCAGCGTGA TERM 1961 1277080 - 1277054 - f 84 -11 -3.86015 | opp_overlap 1277054 1277048 TAGGTTGTTGACAAA GGGCTAAAATGA TCT TTATTTTAGCCC TTTGTCTTCTTTTCA TERM 1962 1277054 - 1277080 + F 100 -13.2 -4.45253 | opp_overlap 1277054, overlap 1277048 TAGGTTGTTGACAAA GGGCTAAAATGA TCT TTATTTTAGCCC TTTGTCTTCTTTTCA TERM 1963 1277217 - 1277232 + F 100 -9 -5.24989 | opp_overlap 1277217 GTCTACACGCTGAAA GCCCTT ATTA AAGGGC TTTTTTACTGTCTAC TERM 1964 1277232 - 1277217 - f 74 -9 -3.59262 | opp_overlap 1277217 GTCTACACGCTGAAA GCCCTT ATTA AAGGGC TTTTTTACTGTCTAC ohrA 1277367 - 1277795 + | organic hydroperoxide resistance protein TERM 1965 1277796 - 1277848 + T 100 -12.4 -4.57073 | gap 1, opp_overlap 1277805 1277810, overlap 1277805 1277810 GCTGTCGCACAATAA TTGATATCAT-AAAAGGCTGAGGGA ATAT TCCCTCAGCCTTTTGATTGTGTTAA TTTTTGCAAAAGCTC TERM 1966 1277805 - 1277838 + T 100 -19.1 -2.89844 | opp_overlap 1277805 1277810, overlap 1277796 1277810 CAATAATTGATATCA TAAAAGGCTGAGGGA ATAT TCCCTCAGCCTTTTG ATTGTGTTAATTTTT TERM 1967 1277838 - 1277805 - T 100 -16.9 -2.68419 | opp_overlap 1277805 1277796 1277810, overlap 1277810 CAATAATTGATATCA TAAAAGGCTGAGGGA ATAT TCCCTCAGCCTTTTG ATTGTGTTAATTTTT TERM 1968 1277833 - 1277810 - T 100 -16.8 -4.51378 | opp_overlap 1277810 1277805 1277796, overlap 1277805 ATTGATATCATAAAA GGCTGAGGGA ATAT TCCCTCAGCC TTTTGATTGTGTTAA TERM 1969 1277810 - 1277833 + T 100 -16.8 -4.56314 | opp_overlap 1277805 1277810, overlap 1277805 1277796 ATTGATATCATAAAA GGCTGAGGGA ATAT TCCCTCAGCC TTTTGATTGTGTTAA ohrR 1278274 - 1277828 - | transcriptional regulator OhrR TERM 1970 1278248 - 1278235 - G 74 -4.5 -4.79953 | opp_overlap 1278235 ATAACAAGAAACAAA GCTGA TTTT CCAGC TTCATATGTTCGAAT ohrB 1278437 - 1278853 + | organic hydroperoxide resistance protein TERM 1971 1278904 - 1278881 - T 100 -15.4 -5.19212 | opp_overlap 1278881 ATCATGATGAAAAAA GACACCTGCT CATG AGCAGGTGTC TTTTTTTAATATTCT TERM 1972 1278881 - 1278904 + T 100 -15.4 -5.6473 | opp_overlap 1278881 ATCATGATGAAAAAA GACACCTGCT CATG AGCAGGTGTC TTTTTTTAATATTCT guaD 1279380 - 1278910 - | guanine deaminase TERM 1973 1278939 - 1278962 + g 74 -4.4 -5.07567 | TTTGTTCGTATGTTG CCCATGCTTC AAAT GGTGCAAGGG TTTTTTGAAGTGTCA TERM 1974 1279102 - 1279085 - G 70 -5.6 -4.30576 | TGTCCAGCAGCAAAA TAGACC GCTTTT GGTCTA GCCCAGTAAATAGCG TERM 1975 1279507 - 1279485 - R 91 -9.1 -4.9725 | ATTTGCACATAAAAA TCCCCCGCC GTGAT AGCAGGGGA GAAGGAATCAATTAT TERM 1976 1279527 - 1279537 + r 77 -6.8 -4.56775 | GAATCAATTATGCAT GCTG CGC CAGC TTTTTACGAGCGACT metE 1281807 - 1279519 - | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase TERM 1977 1280124 - 1280144 + g 71 -8.3 -3.56162 | opp_overlap 1280124, overlap 1280121 AAGACCAGTTTAAGA TGGTGACAG GAC CTGTCAGCA TTCCTTTGACCTTTT TERM 1978 1281875 - 1281835 - H 73 -2.7 -5.19879 | opp_overlap 1281835 CTCTAAATATAAAAA GACATTTACACTCAC GGTGAAGATTG ATGAGGGCAAATGTC TGGTTTAAAAAGACA BPUM_1216 1281968 - 1282123 + | hypothetical protein TERM 1979 1282252 - 1282224 - T 89 -6.1 -5.63103 | TTTTAATTAAAAAAA TCCTGAGAAAA TTCAATC TATTCTCAGGA CCTCTATTCAAGTTA ispA 1283224 - 1282265 - | serine protease BPUM_1218 1283574 - 1283383 - | hypothetical protein ykoG 1283671 - 1284357 + | response regulator TERM 1980 1285537 - 1285525 - g 72 -6.3 -4.38712 | overlap 1285531 GGGATTGGCATAAAA GAAGA GGA TCTTC CGAAAATCTTTGACC ykoH 1284361 - 1285710 + | sensor histidine kinase TERM 1981 1286094 - 1286079 - g 84 -2.6 -5.73563 | gap 1, overlap 1286081 ACCAAATGAAAAAAA TGC-TGA GCT TCAGGCA GAAGAAGCGGCTGTT TERM 1982 1286175 - 1286149 - g 91 -4.5 -5.59962 | opp_overlap 1286143, overlap 1286143 1286151 CAAAAGAAAGAAAAA TCGGATCGT TTTATCTTT ACGATCCAA TCAAAAAAAGAATTA ykoI 1285777 - 1286466 + | hypothetical protein ykoJ 1286560 - 1287078 + | hypothetical protein TERM 1983 1287091 - 1287112 + F 79 -8.8 -4.13014 | opp_overlap 1287091 TAAGCCACAACGAAA CCTTACAC TTTCAT GTGTAAGG TTTTCAGCGTGTAGA TERM 1984 1287112 - 1287091 - f 79 -8.8 -4.01939 | opp_overlap 1287091 TAAGCCACAACGAAA CCTTACAC TTTCAT GTGTAAGG TTTTCAGCGTGTAGA TERM 1985 1287287 - 1287249 - f 100 -21.4 -4.19746 | opp_overlap 1287255, overlap 1287255 CTGAGCTGAAAAGAA GACAAAGGGCTAAAATAA AGT TCATTTTAGCCCTTTGTC GACAATCTGAAACCT TERM 1986 1287255 - 1287281 + F 86 -11 -3.87373 | opp_overlap 1287249 1287255 TGAAAAGAAGACAAA GGGCTAAAATAA AGT TCATTTTAGCCC TTTGTCGACAATCTG TERM 1987 1287281 - 1287255 - f 100 -13.2 -4.45253 | opp_overlap 1287255, overlap 1287249 TGAAAAGAAGACAAA GGGCTAAAATAA AGT TCATTTTAGCCC TTTGTCGACAATCTG TERM 1988 1287300 - 1287321 + F 100 -8.8 -5.26875 | opp_overlap 1287300 GTCGACAATCTGAAA CCTTACAC TTTTAT GTGTAAGG TTTTTTCATTGGGAC TERM 1989 1287321 - 1287300 - f 74 -8.8 -3.69354 | opp_overlap 1287300 GTCGACAATCTGAAA CCTTACAC TTTTAT GTGTAAGG TTTTTTCATTGGGAC ykzD 1287364 - 1287504 + | hypothetical protein TERM 1990 1287517 - 1287544 + T 83 -5.5 -5.41143 | TAAAAAACAGTGAAA GGGCGATGGTC TACTTT GTCTATCGCTC TTTTTTTGAAAAGTA BPUM_1224 1287730 - 1287536 - | hypothetical protein TERM 1991 1287827 - 1287848 + H 90 -6.6 -5.60993 | opp_overlap 1287827 GTCATGCTTACAAAG CGCCTTCA TTCGGT TGAAGGTG TTTTTTTATGGGAAA ykoK 1288009 - 1289367 + | Mg2+/Co2+ transporter TERM 1992 1289400 - 1289374 - f 100 -16.8 -3.73647 | opp_overlap 1289374 1289399 CTGATGTAGCAAGAA GACTGTAAAACG TGA CGTTTTACAGTC TTTTTTGAATAAAGA TERM 1993 1289374 - 1289400 + F 100 -16.8 -5.08824 | opp_overlap 1289374, overlap 1289399 CTGATGTAGCAAGAA GACTGTAAAACG TGA CGTTTTACAGTC TTTTTTGAATAAAGA TERM 1994 1289617 - 1289605 - g 85 -2 -5.85425 | opp_overlap 1289605 GAAATAAACAAAAAA TAGA AAATA TCTA TGTTGAAGGCGCTGT BPUM_1226 1289469 - 1289867 + | hypothetical protein TERM 1995 1289875 - 1289915 + T 85 -5 -5.64421 | opp_overlap 1289877, overlap 1289877 CTCAATGAAAGCTGA AAGGATAGA-AGAGTTGAAA GAA TTTCG-CTCTATCTATCCTC TTTTTTATTTCAAAT TERM 1996 1289877 - 1289913 + T 80 -7.6 -4.45696 | opp_overlap 1289877, overlap 1289875 CAATGAAAGCTGAAA GGATAGA-AGAGTTGAAA GAA TTTCG-CTCTATCTATCC TCTTTTTTATTTCAA BPUM_1227 1290800 - 1289937 - | LysR family transcriptional regulator BPUM_1228 1291013 - 1291384 + | hypothetical protein TERM 1997 1291873 - 1291894 + T 100 -10.2 -5.24129 | opp_overlap 1291871 1291875 GTCGTAAATGGAACG GAGACAGC AAAAAA GCTGTCTC TTTTTTATGAAACCA tnrA 1292293 - 1291964 - | transcriptional regulator ykzB 1292480 - 1292638 + | hypothetical protein BPUM_1232 1292678 - 1292842 + | hypothetical protein TERM 1998 1292991 - 1293006 + F 78 -3.3 -5.42259 | ATGTCGGATCTTGAT GGTTT GCTAAA AAACC TTTTTTTCGAGATGG ykoM 1293201 - 1293662 + | MarR family transcriptional regulator TERM 1999 1293693 - 1293666 - T 81 -11.4 -2.75993 | opp_overlap 1293671, overlap 1293671 TTATTTAGATAGAAC GAAAAGGTGCCA TGAT TGGCACCTTTTT TATGTGTCCAGCTGA TERM 2000 1293688 - 1293671 - T 90 -11.3 -4.5464 | opp_overlap 1293671, overlap 1293666 TAGATAGAACGAAAA GGTGCCA TGAT TGGCACC TTTTTTATGTGTCCA TERM 2001 1293671 - 1293688 + T 100 -11.3 -5.4251 | opp_overlap 1293666 1293671 TAGATAGAACGAAAA GGTGCCA TGAT TGGCACC TTTTTTATGTGTCCA ykoW 1296116 - 1293693 - | cell signaling protein ykoX 1296360 - 1296974 + | DedA family membrane protein TERM 2002 1297167 - 1297192 + F 100 -13.4 -5.17576 | opp_overlap 1297167, overlap 1297181 TCACATGTCTAGCAA GACCTTTGCC ATTACA GGCAAAGGTC TTTTTTGCATTCATA TERM 2003 1297192 - 1297167 - f 95 -13.4 -3.16191 | opp_overlap 1297167 1297181 TCACATGTCTAGCAA GACCTTTGCC ATTACA GGCAAAGGTC TTTTTTGCATTCATA TERM 2004 1297707 - 1297681 - g 77 -6.5 -4.62302 | opp_overlap 1297674 1297684 TAACACTGCCAAAAA CAAGTCTTCCG CAAAT CGGTGGACTTG ATGGTGGTCAATTTA ykoY 1297257 - 1298048 + | hypothetical protein TERM 2005 1298118 - 1298098 - f 86 -11.2 -4.02334 | opp_overlap 1298098, overlap 1298101 CACGTATATTACAAA TAAGGGGG AGATA CCCCCTTA TTTCTTTGCTTTTAG TERM 2006 1298098 - 1298118 + F 90 -11.2 -4.67692 | opp_overlap 1298098 1298101 CACGTATATTACAAA TAAGGGGG AGATA CCCCCTTA TTTCTTTGCTTTTAG TERM 2007 1298115 - 1298101 - f 79 -8.5 -4.1337 | opp_overlap 1298098, overlap 1298098 GTATATTACAAATAA GGGGG AGATA CCCCC TTATTTCTTTGCTTT sigI 1298264 - 1299019 + | putative RNA polymerase sigma factor SigI TERM 2008 1299478 - 1299466 - g 79 -3.4 -5.252 | opp_overlap 1299466 GACTGTGATAAAAAA GGTT ACGTG AACC ATTCTAAGAGTATTT rsgI 1299016 - 1300200 + | SigI regulator RsgI TERM 2009 1300224 - 1300206 - T 100 -8.8 -5.95946 | opp_overlap 1300206 1300204 TGAACAATAAAAAAA CGCCAGAA TCA CTCCGGCG TATTTCACCATGCTT sspD 1300434 - 1300240 - | small acid-soluble spore protein D TERM 2010 1300527 - 1300554 + r 100 -12.8 -4.32034 | opp_overlap 1300530, overlap 1300530 CAATTGCTGTACAAA AAACCGAGGTGA TGAT TCACCTCGGTTC TTTTAATCCTGATGC TERM 2011 1300530 - 1300551 + r 100 -14.5 -4.27443 | opp_overlap 1300530, overlap 1300527 TTGCTGTACAAAAAA CCGAGGTGA TGAT TCACCTCGG TTCTTTTAATCCTGA TERM 2012 1300551 - 1300530 - R 100 -14.5 -5.24129 | opp_overlap 1300530 1300527 TTGCTGTACAAAAAA CCGAGGTGA TGAT TCACCTCGG TTCTTTTAATCCTGA BPUM_1240 1301270 - 1300557 - | hypothetical protein TERM 2013 1301456 - 1301467 + H 73 -4.4 -4.87893 | opp_overlap 1301456 GTTATGATAAATAGA GGAA ATGA TTCC TTTTTCCTTGCAATT htpX 1301551 - 1302450 + | heat shock protein HtpX TERM 2014 1302489 - 1302457 - f 79 -10.7 -3.26836 | opp_overlap 1302458 1302463, overlap 1302458 1302463 GCAAAATAAGAGAGA CGAAAAGACATTCTG TTA CAGGATGTCTTTTCT TTTTTGATGAAAAAG TERM 2015 1302488 - 1302458 - f 95 -14.2 -2.55017 | opp_overlap 1302458 1302463, overlap 1302457 1302463 CAAAATAAGAGAGAC GAAAAGACATTCTG TTA CAGGATGTCTTTTC TTTTTTGATGAAAAA TERM 2016 1302458 - 1302488 + F 100 -16.4 -5.14563 | opp_overlap 1302457 1302458 1302463, overlap 1302463 CAAAATAAGAGAGAC GAAAAGACATTCTG TTA CAGGATGTCTTTTC TTTTTTGATGAAAAA TERM 2017 1302463 - 1302483 + F 100 -10.5 -5.45813 | opp_overlap 1302463 1302458 1302457, overlap 1302458 TAAGAGAGACGAAAA GACATTCTG TTA CAGGATGTC TTTTCTTTTTTGATG TERM 2018 1302483 - 1302463 - f 83 -8.3 -4.4296 | opp_overlap 1302458 1302463, overlap 1302458 1302457 TAAGAGAGACGAAAA GACATTCTG TTA CAGGATGTC TTTTCTTTTTTGATG TERM 2019 1302621 - 1302648 + G 77 -6.2 -4.72617 | overlap 1302620 1302622 AAAAAGCTAATTGAC CGGCTATCGGCT TTCC AGCTGATTGCCC TTTATTATTTTCTCG TERM 2020 1302622 - 1302647 + G 78 -9.7 -3.41944 | overlap 1302620 1302621 AAAAGCTAATTGACC GGCTATCGGCT TTCC AGCTGATTGCC CTTTATTATTTTCTC TERM 2021 1302748 - 1302786 + G 74 -9.6 -3.27298 | overlap 1302751 1302753 1302757 TCGATGCATTATTTA CGGCGGTGAGTGCTGTGA GTG TCACAGGACTTACTGTGG TTGATACTTCGCAAA TERM 2022 1302751 - 1302783 + G 83 -12.1 -2.81815 | overlap 1302748 1302753 1302757 ATGCATTATTTACGG CGGTGAGTGCTGTGA GTG TCACAGGACTTACTG TGGTTGATACTTCGC TERM 2023 1302753 - 1302781 + G 79 -11.1 -2.95409 | overlap 1302751 1302748 1302757 GCATTATTTACGGCG GTGAGTGCTGTGA GTG TCACAGGACTTAC TGTGGTTGATACTTC ykrM 1302594 - 1303940 + | Trk family K+ transporter NAD+ binding protein TERM 2024 1303962 - 1303942 - f 80 -9.8 -3.56092 | opp_overlap 1303942 TCATCATCGGCTAAA CAGCATTC CGAGC GAATGCTG TTTTTTTATTTCCAT TERM 2025 1303942 - 1303962 + F 100 -9.8 -5.96894 | opp_overlap 1303942 TCATCATCGGCTAAA CAGCATTC CGAGC GAATGCTG TTTTTTTATTTCCAT BPUM_1243 1304038 - 1304556 + | hypothetical protein BPUM_1244 1304563 - 1304727 + | hypothetical protein BPUM_1245 1304720 - 1304887 + | hypothetical protein TERM 2026 1304894 - 1304910 + T 100 -10.9 -5.69793 | opp_overlap 1304894 AAAAAATAGAAAAAA CGATCCT CGC AGGATCG TTTTTTATTTGCTAT TERM 2027 1304910 - 1304894 - T 100 -10.9 -5.72118 | opp_overlap 1304894 AAAAAATAGAAAAAA CGATCCT CGC AGGATCG TTTTTTATTTGCTAT ykrP 1305934 - 1304915 - | acetyltransferase TERM 2028 1306686 - 1306711 + G 79 -6.8 -4.72986 | GTTCAAAGATTTGTT TGACCGAGCC ATTGAC GGCATGGTCA TTTTTGATCAGGATG TERM 2029 1307855 - 1307866 + G 78 -5.8 -4.75288 | opp_overlap 1307854 1307855 AAGGAAATATAGAAG GGGA GTAT TCCC TTTATTTTAATGTGA kinE 1306228 - 1308423 + | sporulation sensor histidine kinase E ogt 1308425 - 1308916 + | methylated-DNA-[protein]-cysteine S-methyltransferase TERM 2030 1309156 - 1309124 - T 95 -5.5 -5.72053 | opp_overlap 1309124 GAATGAAATAAAAAA GCGCGGTGCTCTT AAATAAG AAGTACACGGCGC TTTTTTTATGATCAG TERM 2031 1309124 - 1309156 + T 81 -3.3 -5.67063 | opp_overlap 1309124 GAATGAAATAAAAAA GCGCGGTGCTCTT AAATAAG AAGTACACGGCGC TTTTTTTATGATCAG BPUM_1249 1310229 - 1309168 - | methylthioribose-1-phosphate isomerase mtnK 1311429 - 1310236 - | methylthioribose kinase TERM 2032 1310682 - 1310692 + g 70 -5.4 -4.48299 | AAAAAGCGAATTCTG GATC AAT GATC TTTGTTTCCGTCTCA TERM 2033 1311483 - 1311458 - H 100 -16.3 -5.43487 | opp_overlap 1311458 AAATCATATAAAAAA GCCTCTTTCTC CTGA GAGAAAGAGGC TTGATGTCGTGTATG TERM 2034 1311458 - 1311483 + H 100 -16.3 -3.31983 | opp_overlap 1311458 AAATCATATAAAAAA GCCTCTTTCTC CTGA GAGAAAGAGGC TTGATGTCGTGTATG TERM 2035 1312075 - 1312063 - g 82 -4.7 -5.38497 | opp_overlap 1312063 AGCGAAATTAAAAAA GGCTG CCG CTGCC TTTTATGAAAGAGAA TERM 2036 1312628 - 1312639 + G 73 -5.8 -4.5081 | GCGATTGAGCTTTAT CAGG ATCA CCTG TTTGTTTCACTGTTT mtnE 1311833 - 1313023 + | transaminase TERM 2037 1313192 - 1313225 + F 95 -5.4 -5.7946 | gap 1, opp_overlap 1313192 AATGATACGAAACAA CCTCTTTAAGGCGCT GATTA AGCAC-TTGAAGAGG TTTTTTTATTGACCA TERM 2038 1314275 - 1314289 + G 82 -8.6 -4.25848 | CAGCAGGCATTCATC CTGGAA TGG TTCCAG TTTTGATGAAAGATT mtnW 1313242 - 1314492 + | 2,3-diketo-5-methylthiopentyl-1-phosphate enolase TERM 2039 1314553 - 1314543 - gf 71 -4 -4.7871 | AACCATTACGAAAAA TGAT AAT ATCA TTCGCATCATGAAGC mtnX 1314493 - 1315188 + | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase mtnY 1315152 - 1315790 + | methylthioribulose-1-phosphate dehydratase mtnZ 1315807 - 1316337 + | 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase TERM 2040 1316379 - 1316344 - f 83 -11.3 -3.51032 | gap 1, opp_overlap 1316346, overlap 1316346 ACGGTTTAATGACAA GAGCTGATCATTCCGC ATGAG GCGGAA-GATCAGCTT TTTTTTAGGAAAATA TERM 2041 1316346 - 1316377 + F 100 -13.9 -5.75342 | gap 1, opp_overlap 1316344 1316346 GGTTTAATGACAAGA GCTGATCATTCCGC ATGAG GCGGAA-GATCAGC TTTTTTTTAGGAAAA TERM 2042 1316377 - 1316346 - f 100 -13.9 -3.32946 | gap 1, opp_overlap 1316346, overlap 1316344 GGTTTAATGACAAGA GCTGATCATTCCGC ATGAG GCGGAA-GATCAGC TTTTTTTTAGGAAAA TERM 2043 1316562 - 1316535 - f 75 -4.4 -5.02074 | opp_overlap 1316535 TTAGGCTGTAAAAAA TTAAATAAAATA AGCA TATTTAATTTAA TTTACAAATAAAGTA spo0E 1316639 - 1316881 + | negative sporulation regulatory phosphatase TERM 2044 1316915 - 1316892 - T 100 -13.2 -5.72616 | overlap 1316913 1316914 ATTGACATAAAAAAA CCGGTCTTGC CTAA GCAAAACCGG CTGAATGTTTCAGCT kinD 1318434 - 1316929 - | sporulation sensor histidine kinase D TERM 2045 1317751 - 1317763 + g 79 -7.7 -4.36262 | CTGCGGATAGACCTC CAGCT TCC AGCTG TTTTCATCTAAATAT ykvE 1318640 - 1319095 + | MarR family transcriptional regulator TERM 2046 1319090 - 1319133 + T 100 -10.6 -5.28176 | gap 1, opp_overlap 1319093 1319104, overlap 1319104 TTATATGATCATAAA GAATAAATAAAAAAGGAAGCC GAG GGCTCCCTTTTTTATTT-TGC TTTTTTCTCAATCGG TERM 2047 1319131 - 1319093 - T 100 -15.6 -4.12254 | opp_overlap 1319090 1319104, overlap 1319104 TATGATCATAAAGAA TAAATAAAAAAGGAAGCC GAG GGCTCCCTTTTTTATTTT GCTTTTTTCTCAATC TERM 2048 1319120 - 1319104 - T 100 -10.1 -5.82036 | opp_overlap 1319090 1319104, overlap 1319093 AGAATAAATAAAAAA GGAAGCC GAG GGCTCCC TTTTTTATTTTGCTT TERM 2049 1319104 - 1319120 + T 100 -7.9 -5.85244 | opp_overlap 1319104 1319093, overlap 1319090 AGAATAAATAAAAAA GGAAGCC GAG GGCTCCC TTTTTTATTTTGCTT motB 1319889 - 1319125 - | flagellar motor protein MotB TERM 2050 1319850 - 1319868 + g 100 -8.2 -5.22943 | GCCAAGATTCATCTA CATGGTCA TCG TGATCATG TTTTTTACGTTTCCT motA 1320676 - 1319882 - | flagellar motor protein MotA TERM 2051 1320814 - 1320842 + r 100 -13.3 -5.13137 | opp_overlap 1320814 1320818 TATTGCTTTAAAAAA GAAACTCCCTCTA ATA TAAAGGGAGTTTC TTTTTAATTTCTTTG TERM 2052 1320842 - 1320814 - R 100 -15.5 -5.0133 | opp_overlap 1320814, overlap 1320818 TATTGCTTTAAAAAA GAAACTCCCTCTA ATA TAAAGGGAGTTTC TTTTTAATTTCTTTG TERM 2053 1320838 - 1320818 - R 93 -10.5 -5.04249 | opp_overlap 1320814, overlap 1320814 GCTTTAAAAAAGAAA CTCCCTCTA ATA TAAAGGGAG TTTCTTTTTAATTTC TERM 2054 1320869 - 1320887 + r 72 -4.7 -4.77438 | overlap 1320857 TTTGAGCAGTTTCAT TTAAAAG CAGCT CTTTTAA TTTTTCCTCATACAT clpE 1323153 - 1321051 - | endopeptidase ClpE TERM 2055 1321572 - 1321587 + g 75 -5.4 -4.82855 | opp_overlap 1321566 1321564 GAAGGAACATGTGCT GCACAT CAGG GTGTGC TTTTTCGATTTCATC TERM 2056 1321989 - 1322000 + g 90 -5.8 -5.4505 | CTTGCAGTTTGCCAA CAGG GATG CCTG TTTTTTGTTCGACAA TERM 2057 1322103 - 1322115 + g 71 -3.3 -4.93316 | overlap 1322094 CTTCTTCTTCATCTC GAAGC TTT GCTGC TTTTTCGTATTGTTC TERM 2058 1323539 - 1323549 + G 75 -5.4 -4.74801 | ATTCGGAATCTTGAT TAGC GGC GCTA TTTTTACTGGACTTG ykvI 1323399 - 1324442 + | hypothetical protein TERM 2059 1324558 - 1324579 + F 100 -7.3 -6.07374 | AAAAAACTAAGGACT TGCCGTATC CTTG GATGTGGCA TTTTTTATTTTTTAT TERM 2060 1324601 - 1324627 + F 75 -4.5 -5.07652 | gap 1 ATTTTTTATGGCTGG GACACCTCATAC ACAT GTAA-AGGTGTC TTTTCTTTTGAGAAA TERM 2061 1324989 - 1324973 - g 77 -3.7 -5.12068 | GATATTGAAGAAAAA GAAGG AGAGCTG CCTTC CACGTTTGTACCAGG BPUM_1263 1324718 - 1325374 + | transcriptional regulator queD 1325375 - 1325815 + | 6-pyruvoyltetrahydropterin synthase TERM 2062 1326404 - 1326421 + G 71 -7 -4.1552 | overlap 1326399 GACAACAGGTGATGA TGCGTC CTTATT GACGCA TTTATTAAAGAAATA queE 1325808 - 1326539 + | queuosine biosynthesis protein queF 1326555 - 1327052 + | 7-cyano-7-deazaguanine reductase TERM 2063 1327082 - 1327063 - f 100 -8.6 -5.47159 | opp_overlap 1327063 GCTAATAAAGAAAAA GACATGCC TAAT GACATGTC TTTCAGCGTGTAGAC TERM 2064 1327252 - 1327214 - f 100 -19.2 -4.18506 | opp_overlap 1327220 TCACGCTGAAAAGAA GACCAAGTGCTAAAATCA AGA TCATTTTAGCACTTGGTC AACAATCTGAGACAT TERM 2065 1327220 - 1327246 + F 74 -9.6 -3.15249 | opp_overlap 1327214 TGAAAAGAAGACCAA GTGCTAAAATCA AGA TCATTTTAGCAC TTGGTCAACAATCTG TERM 2066 1327263 - 1327281 + F 100 -8.9 -5.68039 | TGGTCAACAATCTGA GACATGC CTAAT GCATGTC TTTTTTTATGGGTTT TERM 2067 1327354 - 1327331 - g 91 -4.6 -5.66684 | gap 1 GAAGTGATAAAAAAA GAGAAGAGTCA TGT CG-CTCTCCTC ATAAAAATGGGAATA BPUM_1267 1327277 - 1327477 + | hypothetical protein TERM 2068 1327624 - 1327612 - g 76 -7.7 -4.18167 | opp_overlap 1327611 1327620 AAAGAACGATATAAA TGGAG TGC CTCCA CATTGCTTGGAGTGA BPUM_1268 1327519 - 1327737 + | hypothetical protein TERM 2069 1327797 - 1327761 - T 79 -8.9 -4.1421 | opp_overlap 1327766, overlap 1327766 CAGATGAAATAATAA CAAAAGGACATAACAAA TTG TATGCTATGTCCTTTTT TCTGCATTTATTTTT TERM 2070 1327792 - 1327766 - T 91 -8.8 -5.04082 | opp_overlap 1327766, overlap 1327761 GAAATAATAACAAAA GGACATAACAAA TTG TATGCTATGTCC TTTTTTCTGCATTTA TERM 2071 1327766 - 1327792 + T 88 -6.6 -5.33866 | opp_overlap 1327766 1327761 GAAATAATAACAAAA GGACATAACAAA TTG TATGCTATGTCC TTTTTTCTGCATTTA BPUM_1269 1328343 - 1327819 - | acetyltransferase BPUM_1270 1328678 - 1328490 - | hypothetical protein BPUM_1271 1328846 - 1329040 + | hypothetical protein TERM 2072 1329073 - 1329036 - f 72 -7.1 -3.88097 | opp_overlap 1329042, overlap 1329042 TTACAGAAGCAAGAA GCTAAAGCTTTCTCTCA TGAA TGAGAGAAAGCTTTTTT ATTTTAGTTCTTTTG TERM 2073 1329042 - 1329067 + F 100 -14.9 -5.85244 | opp_overlap 1329036 1329042 AAGCAAGAAGCTAAA GCTTTCTCTCA TGAA TGAGAGAAAGC TTTTTTATTTTAGTT TERM 2074 1329067 - 1329042 - f 100 -14.9 -3.87062 | opp_overlap 1329042, overlap 1329036 AAGCAAGAAGCTAAA GCTTTCTCTCA TGAA TGAGAGAAAGC TTTTTTATTTTAGTT ykvT 1329348 - 1330001 + | hypothetical protein TERM 2075 1330031 - 1330007 - f 90 -10.8 -4.55295 | TGCCGTATAAAGAAA TGAAGCGATC AATTA GATCGCTCCA GCGTGTAGACAAACC TERM 2076 1330198 - 1330154 - f 100 -13.1 -4.12188 | opp_overlap 1330163, overlap 1330157 1330159 1330163 CTATCACGCTGAAAA GGAGACAAAGGACTAAAATAA AGA TCATTTTAGCCCTTTGTCAAC AATCTGAAGCGATCA TERM 2077 1330195 - 1330157 - f 100 -17.8 -3.09004 | opp_overlap 1330163, overlap 1330154 1330159 1330163 TCACGCTGAAAAGGA GACAAAGGACTAAAATAA AGA TCATTTTAGCCCTTTGTC AACAATCTGAAGCGA TERM 2078 1330193 - 1330159 - f 95 -14.6 -3.10091 | opp_overlap 1330163, overlap 1330157 1330154 1330163 ACGCTGAAAAGGAGA CAAAGGACTAAAATAA AGA TCATTTTAGCCCTTTG TCAACAATCTGAAGC TERM 2079 1330189 - 1330163 - f 85 -9.6 -4.20797 | opp_overlap 1330163, overlap 1330159 1330157 1330154 TGAAAAGGAGACAAA GGACTAAAATAA AGA TCATTTTAGCCC TTTGTCAACAATCTG TERM 2080 1330205 - 1330225 + F 100 -5.4 -6.10295 | overlap 1330207 TTTGTCAACAATCTG AAGCGATC AATTA GATCGCTC TTTTTTTTGTCTTCA TERM 2081 1330207 - 1330223 + F 83 -8 -4.67703 | overlap 1330205 TGTCAACAATCTGAA GCGATC AATTA GATCGC TCTTTTTTTTGTCTT TERM 2082 1330469 - 1330497 + G 70 -8.1 -3.58209 | overlap 1330467 1330471 ATTATGCTTGTCCTT GTGATTGCCAGCT TAG AGCTGCCAGTCTC TATTTCTAAATTCAT TERM 2083 1330471 - 1330495 + G 74 -9.3 -3.36059 | overlap 1330469 1330467 TATGCTTGTCCTTGT GATTGCCAGCT TAG AGCTGCCAGTC TCTATTTCTAAATTC TERM 2084 1330858 - 1330874 + G 85 -4.4 -5.56573 | gap 1, overlap 1330860 CATCGGTGTCATTGT CG-CGAG TGAT CTCGTCG TTTTTATTTATTTAT BPUM_1273 1330313 - 1331629 + | hypothetical protein spoIVH 1331684 - 1332172 + | stage IV spore cortex formation protein H TERM 2085 1332191 - 1332215 + F 89 -6.5 -5.48063 | GAAACCTTATTTCAA GAACCAAGG CTCATTC CTTTGGTTC TTTTTTGTGTTCAAT TERM 2086 1334052 - 1334041 - g 71 -2.2 -5.1848 | AATCAACTTAAAAAA CAAG GAAA CTCG ATCATCATGGTAGGA ykvW 1332466 - 1334385 + | P-ATPase superfamily P-type ATPase transporter TERM 2087 1334399 - 1334423 + F 84 -8.6 -4.37886 | gap 1, opp_overlap 1334399 AAGCAAATCATCATA GCGTACTTGGC TTCT GCCA-GTGCGC TTTTGTGCGAAATAC ykvY 1334490 - 1335584 + | M24B subfamily peptidase TERM 2088 1335593 - 1335630 + F 100 -10.8 -5.30686 | gap 1, opp_overlap 1335593 CAAGTAATAAAAAAA TCACGATGA-ACGTCCA TGTCT TGGAAGTGTCATCGTGA TTTTTTGTCACTCTT TERM 2089 1335630 - 1335593 - f 100 -10.8 -5.87996 | gap 1, opp_overlap 1335593 CAAGTAATAAAAAAA TCACGATGA-ACGTCCA TGTCT TGGAAGTGTCATCGTGA TTTTTTGTCACTCTT TERM 2090 1336138 - 1336127 - g 70 -3.6 -4.85599 | GGTATTGCAGAAAAA GCAC AGGC GCGC GGTATGCATTTTTCT BPUM_1277 1335875 - 1336903 + | transcriptional regulator TERM 2091 1337106 - 1337075 - g 73 -2.5 -5.08169 | gap 1, opp_overlap 1337063, overlap 1337063 ATACATTTGAAAAAA TGTTTG-TCCTT AAAAATACA AAGGAACAAACA GAATATAAACAGCTG TERM 2092 1337726 - 1337706 - g 77 -6.1 -4.67755 | opp_overlap 1337706, overlap 1337708 ACATGCATTGAAAAA GCCTGTACA GGA TGCAGAGGC TGTCTACCTGACACT glcT 1336921 - 1337775 + | transcriptional antiterminator TERM 2093 1337844 - 1337830 - f 74 -8.6 -3.46783 | opp_overlap 1337830, overlap 1337828 GACTTAAGGTAAATA CAGGAT AAG ATCCTG TTATTTGCGCAACCT TERM 2094 1337830 - 1337844 + F 79 -8.6 -3.90922 | opp_overlap 1337828 1337830 GACTTAAGGTAAATA CAGGAT AAG ATCCTG TTATTTGCGCAACCT TERM 2095 1339641 - 1339619 - g 74 -9.2 -3.37533 | CTTCAAAATGAGCAA GGTGAAGAAA TCT TTGCTTCACC AATTACAGGGGAGCT ptsG 1337978 - 1340077 + | PTS family glucose/glucoside (glc) porter component IIABC TERM 2096 1340081 - 1340123 + F 73 -9.3 -2.94993 | gap 1, opp_overlap 1340058 1340078 1340087, overlap 1340087 ATTTCAAAATAATTT TCATAACTGCCGTTCTTGTT AGAT GACAAGCTCGGCAG-TATGA TATAATATTGTGGAT TERM 2097 1340087 - 1340118 + F 73 -9.4 -2.89154 | opp_overlap 1340078 1340087, overlap 1340081 AAATAATTTTCATAA CTGCCGTTCTTGTT AGAT GACAAGCTCGGCAG TATGATATAATATTG TERM 2098 1340118 - 1340087 - f 72 -8.7 -3.35349 | opp_overlap 1340087 1340081, overlap 1340078 AAATAATTTTCATAA CTGCCGTTCTTGT TAGATG ACAAGCTCGGCAG TATGATATAATATTG ptsH 1340171 - 1340437 + | phosphocarrier protein HPr TERM 2099 1341094 - 1341078 - g 91 -8.1 -4.81752 | opp_overlap 1341081 AAAAACAGTGAAAAA CAATGAT CTA ATCATTG TGGATGGTATTAGCG ptsI 1340437 - 1342155 + | PTS family phosphoenolpyruvate (PEP) porter component enzyme I TERM 2100 1342187 - 1342167 - f 84 -11.2 -3.78409 | opp_overlap 1342167 CTAAGTGAATTCAAA CCAGACAG TGACC CTGTCTGG TTTTTTTGTCGAATT TERM 2101 1342167 - 1342187 + F 100 -11.2 -5.63504 | opp_overlap 1342167 CTAAGTGAATTCAAA CCAGACAG TGACC CTGTCTGG TTTTTTTGTCGAATT splA 1342268 - 1342495 + | transcriptional regulator splB 1342578 - 1343606 + | spore photoproduct lyase TERM 2102 1343609 - 1343625 + F 100 -8 -5.56264 | opp_overlap 1343609 1343608, overlap 1343604 ATATTTTACTTAAAG CAAGCC TTTAT GGCTTG TTTTTTCTATTTAAA TERM 2103 1344024 - 1344011 - g 87 -4.5 -5.4756 | AAGTGCAATAAAAAA CCTGC AGGA ACAGG ATAAACTCATTTCAT TERM 2104 1344217 - 1344201 - g 76 -2.9 -5.32565 | GAAGCAACGAAAAAA GTGATTG TCT CAGCCAC GAAGGCGATTGTCAA TERM 2105 1344306 - 1344328 + G 72 -6.2 -4.34737 | opp_overlap 1344306 1344299 1344308, overlap 1344308 TATATAAATGAACAA GAGATCCCTT ATA AAGGGACCGC TTTCTTAGTTGATAA TERM 2106 1344328 - 1344306 - g 77 -8.4 -3.95007 | opp_overlap 1344306 1344308, overlap 1344299 1344308 TATATAAATGAACAA GAGATCCCTT ATA AAGGGACCGC TTTCTTAGTTGATAA TERM 2107 1344326 - 1344308 - g 76 -9.6 -3.54701 | opp_overlap 1344306 1344308, overlap 1344306 1344299 TATAAATGAACAAGA GATCCCTT ATA AAGGGACC GCTTTCTTAGTTGAT mcpC 1343724 - 1345685 + | methyl-accepting chemotaxis protein TERM 2108 1345723 - 1345697 - f 71 -6.6 -4.10331 | opp_overlap 1345698, overlap 1345698 GTAATCAAGCAGAAA GGAACCTTGC GACGTGA GCAAGGTTCT TTTTGTATGATAAAA TERM 2109 1345722 - 1345698 - f 76 -10.1 -3.05476 | opp_overlap 1345698, overlap 1345697 TAATCAAGCAGAAAG GAACCTTGC GACGTGA GCAAGGTTC TTTTTGTATGATAAA TERM 2110 1345698 - 1345722 + F 93 -10.1 -5.00895 | opp_overlap 1345698 1345697 TAATCAAGCAGAAAG GAACCTTGC GACGTGA GCAAGGTTC TTTTTGTATGATAAA TERM 2111 1346171 - 1346159 - g 84 -6.2 -5.0538 | opp_overlap 1346159 1346168 CCTTATTTGAAAAAA CGCG GTGCA CGCG TGTTAAACATTGCGT TERM 2112 1346453 - 1346466 + G 77 -3.7 -5.23292 | overlap 1346452 1346451 CAGCCAGAGGAATTT GCAGC ATAT GCAGC TTTTCTTTTATCTGA BPUM_1285 1345760 - 1346545 + | 3-oxoacyl-[acyl-carrier-protein] reductase (NADH) ykwC 1346559 - 1347431 + | 3-hydroxyisobutyrate dehydrogenase TERM 2113 1347457 - 1347435 - T 83 -5.5 -5.45802 | opp_overlap 1347436, overlap 1347436 TGGGTAAAATAAAAA GCCTGTCCC ATAGA GGAACAGGT TTCAGCGTGTAGACA TERM 2114 1347456 - 1347436 - T 76 -9 -3.86397 | opp_overlap 1347436, overlap 1347435 GGGTAAAATAAAAAG CCTGTCCC ATAGA GGAACAGG TTTCAGCGTGTAGAC TERM 2115 1347666 - 1347712 + T 93 -4.7 -5.75342 | gap 2, opp_overlap 1347676, overlap 1347676 TAAGAGATTTCAGAC CGTAGACAAACCCTACCTTTACT TCA AGTAAAAGTGGGGTTT-TC-ACA TTTTTTTTGAAAAAC TERM 2116 1347704 - 1347676 - T 86 -11.1 -4.05747 | opp_overlap 1347666 1347676 CAGACCGTAGACAAA CCCTACCTTTACT TCA AGTAAAAGTGGGG TTTTCACATTTTTTT TERM 2117 1347676 - 1347704 + T 88 -11.1 -4.35095 | opp_overlap 1347676, overlap 1347666 CAGACCGTAGACAAA CCCTACCTTTACT TCA AGTAAAAGTGGGG TTTTCACATTTTTTT TERM 2118 1347743 - 1347768 + T 100 -13.4 -3.98747 | ATCATGTGTTTTACG CTGGACATGG TACTTT CCATGTCCAG TTTGCTAGTTTTTTA BPUM_1287 1349093 - 1347738 - | transposase TERM 2119 1347854 - 1347864 + g 81 -5.4 -5.10933 | GAAGTTTCGTCCAAC GCAT ACC ATGC TTTTCTTTTGCATCC TERM 2120 1348129 - 1348112 - G 80 -9.9 -3.73859 | TACGATAAGAGAGAA TTTGCCC GTTG GGGCAAA TGTAACAATCAAAAT TERM 2121 1348462 - 1348486 + g 100 -9.3 -5.02645 | overlap 1348466 ACATAATAGCCACTC TCTGGGTCAGT TGT ACTGACCTTGA TTTCTTTTGTTTCTT TERM 2122 1348466 - 1348482 + g 88 -10.9 -3.85719 | overlap 1348462 AATAGCCACTCTCTG GGTCAGT TGT ACTGACC TTGATTTCTTTTGTT TERM 2123 1348672 - 1348685 + g 75 -3.1 -5.18357 | gap 1, overlap 1348672 ATGAAGGCGATAGAC GGG-TC AAC GAGCCC TTTTTTCATCGCTTC TERM 2124 1349162 - 1349140 - R 100 -15 -5.39721 | TTATTATACAAAAAA GCTTGTAGAC TTT GTCTACAAGC TGAAACCTGTCCCAT TERM 2125 1349163 - 1349193 + r 100 -14.9 -3.53836 | opp_overlap 1349168, overlap 1349168 ACTTTGTCTACAAGC TGAAACCTGTCCC ATAGA GGGACAGGTTTTA TTGATCTTATTTTCC TERM 2126 1349168 - 1349188 + r 100 -12.6 -4.79657 | opp_overlap 1349168, overlap 1349163 GTCTACAAGCTGAAA CCTGTCCC ATAGA GGGACAGG TTTTATTGATCTTAT TERM 2127 1349188 - 1349168 - R 95 -12.6 -3.69354 | opp_overlap 1349163 1349168 GTCTACAAGCTGAAA CCTGTCCC ATAGA GGGACAGG TTTTATTGATCTTAT ykwD 1349994 - 1349200 - | hypothetical protein TERM 2128 1349578 - 1349589 + g 75 -5.8 -4.68705 | opp_overlap 1349578 TTCAAATGCATTCAA GCTG CTGT CAGC TTTTGTTGCCGTTGT TERM 2129 1350084 - 1350102 + H 71 -3.2 -5.08601 | ACCAGCATCCTCCAT TGACAA TGCCTGT TTGTCA TTTTTGTTAAAGTCA TERM 2130 1350393 - 1350374 - g 82 -2 -5.67063 | overlap 1350375 1350378 CCGAGCAGAAAAAAA TCAAGCGC CGGA ACGCCTGG AGGATTAATCTCTTT BPUM_1289 1350331 - 1352454 + | penicillin-binding protein TERM 2131 1352463 - 1352485 + F 76 -4.9 -5.14965 | opp_overlap 1352463 GCAGTAAACAGCAGA GAGCACA GCAAGAGAA TGTGCTC TTTTTTGCTGAAAAT kinA 1352610 - 1354439 + | sporulation sensor histidine kinase A TERM 2132 1354443 - 1354462 + T 79 -9.3 -3.76775 | opp_overlap 1354443, overlap 1354446 CCTGCAAAATAAAAA CAACGGC AGGAGA GCCGTTG TTTCAGTCTGTTAAA TERM 2133 1354462 - 1354443 - T 100 -9.3 -5.45802 | opp_overlap 1354443 1354446 CCTGCAAAATAAAAA CAACGGC AGGAGA GCCGTTG TTTCAGTCTGTTAAA patA 1355634 - 1354465 - | aminotransferase A TERM 2134 1355477 - 1355490 + g 70 -8.1 -3.67634 | overlap 1355476 AAATTCTCGTCAATC GCTGC TTTG GCAGC TGTTTTGACATGATG BPUM_1292 1355926 - 1356810 + | CDF family cation diffusion facilitator TERM 2135 1356857 - 1356800 - T 100 -18.3 -3.05503 | opp_overlap 1356801 1356815, overlap 1356798 1356815 AAAGTGAAAGAAGCA CGCAAACGTAAAAAAGGCGAT-CAACC ACCTTA GGTTGTATCGCCTTTTTTACGTTT-CA TCTATGCAATGAAAT TERM 2136 1356801 - 1356857 + T 100 -16.3 -2.89683 | gap 1, opp_overlap 1356798 1356800 1356815, overlap 1356815 AAGTGAAAGAAGCAC GCAAACGTAAAAAAGGCGAT-CAACC ACCTTA GGTTGTATCGCCTTTTTTACGTTTCA TCTATGCAATGAAAT TERM 2137 1356815 - 1356843 + T 100 -9.7 -5.22943 | gap 1, opp_overlap 1356815 1356800, overlap 1356801 CGCAAACGTAAAAAA GGCGAT-CAACC ACCTTA GGTTGTATCGCC TTTTTTACGTTTCAT TERM 2138 1356843 - 1356815 - T 100 -9.7 -5.22039 | gap 1, opp_overlap 1356801 1356815, overlap 1356800 CGCAAACGTAAAAAA GGCGAT-CAACC ACCTTA GGTTGTATCGCC TTTTTTACGTTTCAT BPUM_1293 1357024 - 1356872 - | hypothetical protein TERM 2139 1357744 - 1357760 + G 82 -5.9 -4.9792 | GCCGTGCAACAGGTC GCTTTTT TGC AAAAGGC TTTTTGTCTCCAATC BPUM_1294 1357326 - 1357865 + | RDD family protein TERM 2140 1357875 - 1357901 + F 85 -5.2 -5.66684 | gap 1, opp_overlap 1357875 AAATAATGAAAAAAA GCACCTC-TGC TCAATC GTAAGAGGTGC TTTTTTTATAGATTG TERM 2141 1357901 - 1357875 - f 93 -5.2 -5.73672 | opp_overlap 1357875 AAATAATGAAAAAAA GCACCTCT GCTCAATCGTA AGAGGTGC TTTTTTTATAGATTG TERM 2142 1358692 - 1358674 - g 77 -10.4 -3.1978 | overlap 1358672 ACTGCCACAGCAAGA GAAAAAGG CGT CCTTTTTC AGTGGGTATAAAGAA yxiO 1357991 - 1359301 + | major facilitator transporter TERM 2143 1360143 - 1360119 - g 78 -8.7 -3.90588 | opp_overlap 1360118 CACCGCTTAACGAAA TTGTTGAAGGA AAA TCCTTTAACAA GTTCCATACCAATTC cheV 1359375 - 1360283 + | chemotaxis protein CheV TERM 2144 1360273 - 1360326 + T 74 -10.1 -2.7263 | gap 1, opp_overlap 1360285 1360292, overlap 1360292 AAAAAGTCGATCACT TTATTATCTAAAGAAAAAACCACTCG TCA TGAGTGGTTTTTTGTTTAAA-AATAA CTTTCCCCGAGTCGT TERM 2145 1360315 - 1360285 - T 80 -9.9 -3.68529 | opp_overlap 1360273 1360292, overlap 1360292 ACTTTATTATCTAAA GAAAAAACCACTC GTCAT GAGTGGTTTTTTG TTTAAAAATAACTTT TERM 2146 1360308 - 1360292 - T 100 -8 -5.65927 | opp_overlap 1360273 1360292, overlap 1360285 TATCTAAAGAAAAAA CCACTC GTCAT GAGTGG TTTTTTGTTTAAAAA TERM 2147 1360292 - 1360308 + T 100 -8.7 -5.63517 | opp_overlap 1360292 1360285, overlap 1360273 TATCTAAAGAAAAAA CCACTCG TCA TGAGTGG TTTTTTGTTTAAAAA ykyB 1360778 - 1360317 - | hypothetical protein TERM 2148 1360884 - 1360868 - R 76 -5.1 -5.08169 | opp_overlap 1360869, overlap 1360869 AGATATTGTAAAAAA CGATAGG ATT CCTATCT CTCTTATCTACAATA TERM 2149 1360869 - 1360883 + r 72 -8.6 -3.22886 | opp_overlap 1360869 1360868 GATATTGTAAAAAAC GATAGG ATT CCTATC TCTCTTATCTACAAT TERM 2150 1360883 - 1360869 - R 74 -8.6 -3.63817 | opp_overlap 1360869, overlap 1360868 GATATTGTAAAAAAC GATAGG ATT CCTATC TCTCTTATCTACAAT TERM 2151 1361174 - 1361198 + r 74 -8 -4.0174 | opp_overlap 1361174 ATTAGTTCATGATAA CTACCTATTT TAAAT AAATGGGTAG TTTCTCAATTGTATT BPUM_1298 1361494 - 1361279 - | hypothetical protein BPUM_1299 1361661 - 1361837 + | hypothetical protein TERM 2152 1361861 - 1361895 + T 93 -13.1 -2.80761 | opp_overlap 1361867, overlap 1361867 TGTGTTTCAGCCATA CAAAAAGGACTTTCT ATAGA AGAAAGTCCTTTTCG CTTCATTTATTGCGC TERM 2153 1361867 - 1361889 + T 87 -10.7 -4.33808 | opp_overlap 1361867, overlap 1361861 TCAGCCATACAAAAA GGACTTTCT ATAGA AGAAAGTCC TTTTCGCTTCATTTA TERM 2154 1361889 - 1361867 - T 93 -10.7 -4.99035 | opp_overlap 1361867 1361861 TCAGCCATACAAAAA GGACTTTCT ATAGA AGAAAGTCC TTTTCGCTTCATTTA ykuC 1363098 - 1361902 - | major facilitator superfamily macrolide:cation symporter ykuD 1363750 - 1363253 - | peptidoglycan binding protein ykuE 1364764 - 1363907 - | phosphoesterase TERM 2155 1364719 - 1364706 - G 71 -2.3 -5.08824 | opp_overlap 1364714, overlap 1364707 1364713 1364714 GTTGTAGCTAAAAAA CCGAG AATG CTCGC GCCAGCAGCTCCTTT TERM 2156 1364879 - 1364862 - H 70 -7.1 -3.71487 | TATGATAGGGAATAA TGAATGA ATAG TCATTCA AAACTACAGAGGGGG ykuF 1364901 - 1365665 + | short chain dehydrogenase ykuI 1365730 - 1366950 + | EAL domain-containing protein TERM 2157 1366984 - 1367000 + F 100 -8.7 -5.63103 | GCATGAACAATTTGA GTAGCCT TTT AGGCTGC TTTTTTTGATTGAAA TERM 2158 1367126 - 1367146 + F 100 -8.3 -6.04378 | opp_overlap 1367126 TCAAGATCCAAAAAA CTTGGCG CTACCCC CGCCAAG TTTTTTTTGTGCTTT TERM 2159 1367146 - 1367126 - f 91 -8.3 -5.1615 | opp_overlap 1367126 TCAAGATCCAAAAAA CTTGGCG CTACCCC CGCCAAG TTTTTTTTGTGCTTT BPUM_1305 1367243 - 1368139 + | manganese (Mn) catalase TERM 2160 1368153 - 1368143 - f 74 -5.4 -4.82901 | GCTGGTTTATAAAAA CATG GTG CATG AGATCAGAAAAAAGA ykuJ 1368323 - 1368565 + | hypothetical protein ykuK 1368692 - 1369228 + | hypothetical protein TERM 2161 1369516 - 1369506 - g 87 -5.4 -5.45652 | ATGTGGAACAAAAAA TGTC GAT GACA ATACGTATAAGCAAT ykzF 1369378 - 1369569 + | hypothetical protein TERM 2162 1369591 - 1369611 + F 100 -10.5 -5.24129 | opp_overlap 1369593 1369595 TTTAACATTCTATTA GATACTCGG GAG CTGAGTATC TTTTTTATGCAGAAA ykuL 1369717 - 1370160 + | hypothetical protein TERM 2163 1370148 - 1370186 + F 78 -10.5 -3.14211 | opp_overlap 1370158 1370161, overlap 1370158 1370179 CGAAGTGATACATGC TGCGAAAAAATGAGCTG AAGCC CAGCTTATTTTTTTGCC TTCATAAGCAAAAAT TERM 2164 1370171 - 1370158 - f 73 -4.5 -5.0133 | opp_overlap 1370148 1370158, overlap 1370161 CATGCTGCGAAAAAA TGAGC TGAA GCCCA GCTTATTTTTTTGCC TERM 2165 1370158 - 1370176 + F 86 -5.3 -5.54192 | opp_overlap 1370158 1370161, overlap 1370148 CATGCTGCGAAAAAA TGAGCTG AAGCC CAGCTTA TTTTTTTGCCTTCAT TERM 2166 1371003 - 1370989 - g 80 -5 -5.19212 | ACGACCATGAAAAAA GTGTTC ATA AAACAC CGCTTGTTGACGTGA ccpC 1370256 - 1371137 + | LysR family transcriptional regulator TERM 2167 1371138 - 1371162 + F 91 -7.2 -5.47821 | opp_overlap 1371138 1371141, overlap 1371131 AGCGATGCGGTATAA GTACCTTCTT GGAAG AGGAAGGTGC TTTTTTTAGGTGAGT BPUM_1311 1371224 - 1371646 + | hypothetical protein TERM 2168 1371701 - 1371676 - f 86 -7.6 -4.87626 | gap 1, opp_overlap 1371676 CTTCAATACGAAAAA CCCGC-CTTCC AATTG GAAAGAGCGGG TTTTTCATTGAGTGA TERM 2169 1371676 - 1371701 + F 79 -6.2 -4.88407 | gap 2, opp_overlap 1371676 CTTCAATACGAAAAA CCCGC-C-TTCC AATT GGAAAGAGCGGG TTTTTCATTGAGTGA BPUM_1312 1371833 - 1372309 + | flavodoxin BPUM_1313 1372299 - 1373192 + | BNR repeat-containing protein BPUM_1314 1373209 - 1373667 + | flavodoxin TERM 2170 1373656 - 1373680 + F 75 -4.2 -5.13343 | opp_overlap 1373659, overlap 1373659 CATCTGCACCAGCAG GAAGCGGGGT AATCA GTCCCGCTTG TTTTATTTTCCATTG TERM 2171 1373659 - 1373677 + F 74 -5.9 -4.6313 | opp_overlap 1373659, overlap 1373656 CTGCACCAGCAGGAA GCGGGGT AATCA GTCCCGC TTGTTTTATTTTCCA dapD 1373777 - 1374487 + | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase TERM 2172 1374513 - 1374535 + F 95 -12.8 -3.7732 | opp_overlap 1374513 1374515 GCAGCTGAAGACATA GACGTGGATG ATA TATCCACGTC TTATTCGTATAGAGG TERM 2173 1374535 - 1374513 - f 87 -12.1 -3.10245 | opp_overlap 1374513, overlap 1374515 GCAGCTGAAGACATA GACGTGGAT GATAT ATCCACGTC TTATTCGTATAGAGG TERM 2174 1374533 - 1374515 - f 70 -8.9 -3.10761 | opp_overlap 1374513, overlap 1374513 AGCTGAAGACATAGA CGTGGAT GATAT ATCCACG TCTTATTCGTATAGA ykuR 1374568 - 1375698 + | M20D subfamily peptidase TERM 2175 1375709 - 1375739 + F 75 -8.3 -3.8591 | opp_overlap 1375708, overlap 1375711 1375728 AATGAATAAACAAGC TGCCTCCTGTACA CCTTA TGAACAGGAGGTG TTCTTGATTATGACA TERM 2176 1375711 - 1375737 + F 83 -10.9 -3.51235 | opp_overlap 1375708, overlap 1375709 1375728 TGAATAAACAAGCTG CCTCCTGTACA CCTTA TGAACAGGAGG TGTTCTTGATTATGA ykuS 1375749 - 1375991 + | hypothetical protein TERM 2177 1376032 - 1376007 - T 80 -6.1 -5.0809 | opp_overlap 1376007 AACAAACCATAAAAA GAACCGGTAGA TTAT TGTCCCGGTTC TTTTTGCTCTTTTTC TERM 2178 1376007 - 1376032 + T 80 -6.1 -5.02231 | opp_overlap 1376007 AACAAACCATAAAAA GAACCGGTAGA TTAT TGTCCCGGTTC TTTTTGCTCTTTTTC ykuT 1376827 - 1376018 - | MscS family small conductance mechanosenstive ion channel protein ykuU 1377099 - 1377641 + | peroxiredoxin YkuU TERM 2179 1377658 - 1377689 + F 83 -11 -3.54424 | opp_overlap 1377658 1377663, overlap 1377664 TGATAGCTGAAGAAA CAGGAGGGTCTAAC TGAT GTTAGACCTTTTTG TTTCGACACATACAA TERM 2180 1377664 - 1377683 + F 100 -10.8 -5.27335 | opp_overlap 1377663 1377658, overlap 1377658 CTGAAGAAACAGGAG GGTCTAAC TGAT GTTAGACC TTTTTGTTTCGACAC TERM 2181 1377871 - 1377859 - g 73 -9.1 -3.54424 | TGTCATCTTTGTAAA GAGGC AAT GCCTC AAGTCAATCAATTCC ykuV 1377724 - 1378182 + | thioredoxin TERM 2182 1378188 - 1378203 + F 93 -10.4 -5.14563 | TGCAGAATAGGCTTT CCCCCA TCAT TGGGGG TTTTTTCATGGACAA TERM 2183 1378232 - 1378222 - f 76 -5.4 -4.87665 | TTTCATGGACAAAAA TAGG CGA CCTA TTGCACGGAATGGAC rok 1378653 - 1379234 + | comK repressor TERM 2184 1379271 - 1379243 - T 100 -8.2 -5.80003 | opp_overlap 1379247, overlap 1379247 CGAATAAACAAAAAA GAAACTGCTGAC GTCAA GCCAGCAGTTTT TTTATTGCGAGAATT TERM 2185 1379247 - 1379267 + T 100 -6.8 -5.7946 | opp_overlap 1379243 1379247 TAAACAAAAAAGAAA CTGCTGAC GTCAA GCCAGCAG TTTTTTTATTGCGAG TERM 2186 1379267 - 1379247 - T 100 -9 -5.26158 | opp_overlap 1379247, overlap 1379243 TAAACAAAAAAGAAA CTGCTGAC GTCAA GCCAGCAG TTTTTTTATTGCGAG yknT 1380202 - 1379285 - | sigmaE regulated sporulation protein TERM 2187 1380568 - 1380582 + G 80 -10 -3.72576 | ATGGTATTTAGTGAC GGCATG TGA CATGCC TTTCATACGGAGGGA mobA 1380287 - 1380868 + | molybdopterin-guanine dinucleotide biosynthesis protein A moeB 1380898 - 1381914 + | thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein TERM 2188 1382490 - 1382478 - g 71 -4.8 -4.58395 | CCCAGTGGTCAAAAA GCCA GTGAT TGGC ATCATCTCAACAGGT moeA 1381924 - 1383201 + | molybdopterin biosynthesis protein mobB 1383183 - 1383707 + | molybdopterin-guanine dinucleotide biosynthesis protein B TERM 2189 1383969 - 1383992 + G 70 -7.4 -3.86916 | opp_overlap 1383969 GGACACTTGATATAA CGGATATTGC TGTT GCGATAGCCG TTTCATCTCCTCATA moaE 1383704 - 1384195 + | molybdopterin converting factor large subunit moaD 1384188 - 1384421 + | molybdopterin converting factor small subunit TERM 2190 1384437 - 1384463 + T 100 -12.4 -5.4251 | opp_overlap 1384436 TAGATATTAGAGGAT TTGGTTATGGCC AGT GGCTGTAACCAA TTTTTTATGTGTGAA BPUM_1329 1384845 - 1384468 - | hypothetical protein yknW 1385362 - 1385988 + | hypothetical protein TERM 2191 1386405 - 1386388 - g 74 -4.7 -4.77122 | overlap 1386391 TTAGACAAAAAACAA GAAGGCG AATC CGCCACC AATCCTAAAAATGAG TERM 2192 1386402 - 1386391 - g 78 -7.2 -4.44307 | overlap 1386388 GACAAAAAACAAGAA GGCG AATC CGCC ACCAATCCTAAAAAT yknX 1385998 - 1387104 + | hypothetical protein TERM 2193 1387096 - 1387110 + F 74 -8.6 -3.55444 | opp_overlap 1387095 1387090 GGAATGGAAGTGAAT GCTGAA TGA TTCAGC TTTCAAACGTGACAA yknY 1387101 - 1387802 + | ABC transporter ATP-binding protein yknZ 1387789 - 1388982 + | ABC transporter ATP-binding protein TERM 2194 1389042 - 1389066 + F 100 -11.6 -5.69379 | opp_overlap 1389042 AATCAAGTATCAAAA GCTTTTATGC ACATC GCATAAAAGC TTTTTTTAGTTCTAT TERM 2195 1389066 - 1389042 - f 100 -12.3 -4.37013 | opp_overlap 1389042 AATCAAGTATCAAAA GCTTTTATGCA CAT CGCATAAAAGC TTTTTTTAGTTCTAT TERM 2196 1389364 - 1389354 - g 71 -4 -4.77165 | CTGTTTAGAAGAAAA TGAT GTC ATCA AAATACAGGACTTAA fruR 1389304 - 1390059 + | DeoR family transcriptional regulator TERM 2197 1390354 - 1390339 - g 70 -2.5 -4.99134 | overlap 1390340 1390351 ATGTGAAACTAAAAA CCGGT GAAGAA ACCGA AATCAACGGACTAGG fruK 1390056 - 1390967 + | 1-phosphofructokinase TERM 2198 1391889 - 1391907 + G 70 -6 -4.30719 | GCACTTAATGAGCGG TGTAAGCA ACA TGCTTCCA TTTGTTGTCGGAGGC fruA 1390981 - 1392876 + | PTS family fructose/mannitol porter component IIBC TERM 2199 1392868 - 1392856 - f 73 -4.1 -5.03314 | GGTATTTTGAAAAAA CCAGT GAA ACTAG AAGCGTAATTCAGAA TERM 2200 1392886 - 1392910 + F 100 -8.6 -5.34309 | opp_overlap 1392886 1392884 GCGTAATTCAGAAGA GAAGCATCGT GAAGA GCGGTGCTTC TTTTTGTTTAATAAT sipT 1393055 - 1393660 + | signal peptidase I TERM 2201 1393692 - 1393663 - T 100 -11.6 -5.34857 | opp_overlap 1393663 GCAAACAAAATAAAA GCACTCTTCTCA GGTGTG TGAGAAAAGTGC TTAAATGGACGACCC TERM 2202 1393663 - 1393692 + T 73 -9.4 -3.05384 | opp_overlap 1393663 GCAAACAAAATAAAA GCACTCTTCTCA GGTGTG TGAGAAAAGTGC TTAAATGGACGACCC TERM 2203 1393702 - 1393721 + T 91 -9.3 -4.99134 | opp_overlap 1393702 1393699 AAGTGCTTAAATGGA CGACCCT TAAAGT AGGGTCG TTTTTAATTTGGCGT TERM 2204 1393721 - 1393702 - T 71 -9.3 -2.64651 | opp_overlap 1393702, overlap 1393699 AAGTGCTTAAATGGA CGACCCT TAAAGT AGGGTCG TTTTTAATTTGGCGT ykoA 1394000 - 1393725 - | hypothetical protein TERM 2205 1393821 - 1393804 - G 70 -7.7 -3.67 | opp_overlap 1393804, overlap 1393802 GTAATGGCTAAAACA GATCGGA ACAA TCCGACC TTATGATTTTCTTTC TERM 2206 1393840 - 1393856 + g 76 -9.5 -3.54129 | TGATTTTCTTTCCCT CGCTTTT GTA AAAAGCG TTTCGAAAAGATGTG TERM 2207 1394164 - 1394191 + G 71 -8.6 -3.54543 | TGCAGTAAATAATGT TAGTTTGCGATT TGCT GATCGTAAACTA TTTGAAGAAGTAAAT ykpA 1394144 - 1395763 + | ABC transporter ATP-binding protein TERM 2208 1395792 - 1395773 - f 93 -10.8 -5.00196 | opp_overlap 1395777, overlap 1395789 GCGTAAATAAGAAAA GACATCCA CAAA TGGATGTC TCAGCGTGTAGACAA TERM 2209 1395959 - 1395921 - g 100 -17.8 -4.18506 | opp_overlap 1395927, overlap 1395927 TCATGCTGAAAAGAA GACAAAGTGCTAAAATCA AGA TCATTTTAGCACTTTGTC AACAATCTGAGACAT TERM 2210 1395953 - 1395927 - g 95 -9.6 -4.45253 | opp_overlap 1395927, overlap 1395921 TGAAAAGAAGACAAA GTGCTAAAATCA AGA TCATTTTAGCAC TTTGTCAACAATCTG TERM 2211 1395927 - 1395953 + G 81 -9.6 -3.87373 | opp_overlap 1395927 1395921 TGAAAAGAAGACAAA GTGCTAAAATCA AGA TCATTTTAGCAC TTTGTCAACAATCTG TERM 2212 1395970 - 1395989 + G 100 -10.8 -5.53288 | opp_overlap 1395974 TTGTCAACAATCTGA GACATCCA CAAA TGGATGTC TTTTTTTCGGTTAAA BPUM_1340 1395788 - 1396003 + | hypothetical protein ampS 1397232 - 1396000 - | aminopeptidase TERM 2213 1396870 - 1396883 + g 82 -3.1 -5.44119 | GGATCCAGCGGCTTT TTGCT GTGC AGCGA TTTTTTTCGAATCAA TERM 2214 1397341 - 1397312 - R 100 -13.8 -4.4874 | opp_overlap 1397319, overlap 1397319 CGCAAAAAGCCAAAA TAAAAAAGCCGC TTTCGT GCGGCTTTTTTA GCGGTTCAGTTGTTT TERM 2215 1397319 - 1397334 + r 89 -7.5 -5.055 | opp_overlap 1397319 1397312 AGCCAAAATAAAAAA GCCGC TTTCGT GCGGC TTTTTTAGCGGTTCA TERM 2216 1397334 - 1397319 - R 100 -7.5 -5.80951 | opp_overlap 1397319, overlap 1397312 AGCCAAAATAAAAAA GCCGC TTTCGT GCGGC TTTTTTAGCGGTTCA ykpC 1397470 - 1397339 - | hypothetical protein mreBH 1398552 - 1397545 - | cell shape determining protein TERM 2217 1398703 - 1398743 + H 75 -7.9 -4.1413 | ATAAATTTTCCCTTT GTTTTTTCTTTTATGAAAA AAA TTTTTATAGAAGAGAAACC TTTTGAGAATCTCTT TERM 2218 1399002 - 1398969 - g 73 -3.8 -5.00884 | overlap 1398971 ATTGTCTTGAAAAAA TACCAGCCAGAAGG TGTTTG CCTCATGACTGGTG AGATTACATCAGAGA abh 1398828 - 1399106 + | SpoVT/AbrB family transcriptional regulator TERM 2219 1399115 - 1399146 + F 84 -4.3 -5.60993 | opp_overlap 1399115 GCAGTAATGAAAAAA GCCTGATCTCTTC CTTTGT GCTGAGAACAGGC TTTTTTTCTGAAAAA TERM 2220 1399146 - 1399115 - f 79 -4.3 -5.30155 | opp_overlap 1399115 GCAGTAATGAAAAAA GCCTGATCTCTTC CTTTGT GCTGAGAACAGGC TTTTTTTCTGAAAAA kinC 1399198 - 1400559 + | sensor histidine kinase TERM 2221 1401291 - 1401279 - g 77 -4.8 -5.00616 | TTGTGCTTCAAAAAA GCGA AGAAA TCGC CCCGCCAACTCATTA BPUM_1346 1400564 - 1401400 + | hypothetical protein ktrC 1401438 - 1402106 + | Trk family K+ transporter NAD+ binding protein TERM 2222 1402125 - 1402108 - f 70 -6.9 -3.82433 | opp_overlap 1402108 AGAACGATTATTAAA CACTCCG AAGA CGGGGTG TTTTTTTACATGAAT TERM 2223 1402108 - 1402125 + F 100 -9.1 -5.47821 | opp_overlap 1402108 AGAACGATTATTAAA CACTCCG AAGA CGGGGTG TTTTTTTACATGAAT adeC 1402369 - 1404099 + | adenine deaminase TERM 2224 1404110 - 1404138 + T 100 -8.9 -5.58074 | opp_overlap 1404111, overlap 1404111 CATAAAAAGTAAGAA ACCGCATGTGTAC GAT GTATATATGCGGC TTTTTTTAATACTTG TERM 2225 1404137 - 1404111 - T 80 -8 -4.52042 | opp_overlap 1404111 1404110 ATAAAAAGTAAGAAA CCGCATGTGTAC GAT GTATATATGCGG CTTTTTTTAATACTT TERM 2226 1404111 - 1404137 + T 95 -12.4 -3.93218 | opp_overlap 1404111, overlap 1404110 ATAAAAAGTAAGAAA CCGCATGTGTAC GAT GTATATATGCGG CTTTTTTTAATACTT TERM 2227 1404159 - 1404195 + T 81 -11.8 -2.7566 | gap 1, opp_overlap 1404164, overlap 1404164 TTAATACTTGATGAA AAAAAGAGACAC-AGCC AATC GGCTTGTGTCTCTTTTA TGATTACACTTCCAT TERM 2228 1404190 - 1404164 - T 100 -11.7 -5.52986 | gap 1, opp_overlap 1404159 1404164 ACTTGATGAAAAAAA GAGACAC-AGCC AATC GGCTTGTGTCTC TTTTATGATTACACT TERM 2229 1404164 - 1404190 + T 100 -11.7 -4.54821 | gap 1, opp_overlap 1404164, overlap 1404159 ACTTGATGAAAAAAA GAGACAC-AGCC AATC GGCTTGTGTCTC TTTTATGATTACACT ykqC 1405866 - 1404199 - | metallo-beta lactamase superfamily hydrolase ykzG 1406081 - 1405872 - | hypothetical protein TERM 2230 1406196 - 1406169 - H 100 -8.4 -5.24129 | opp_overlap 1406169 GTCTCTGAGAAAAAA GGACCCTCAGCA AATG TGCGGAAGATCC TTTTAAGCGATCGAT ykrA 1406477 - 1407256 + | HAD hydrolase TERM 2231 1407285 - 1407261 - T 80 -3 -5.64873 | overlap 1407264 TTGAAGAATAAAAAA GAAGACCCA-TA GGT TATTGGGTCT-C AGCGTATAGACAAAC TERM 2232 1407283 - 1407264 - T 79 -5.8 -4.86954 | gap 1, overlap 1407261 AAGAATAAAAAAGAA GACCCA-TA GGT TATTGGGTC TCAGCGTATAGACAA TERM 2233 1407452 - 1407414 - T 100 -13.4 -5.42259 | opp_overlap 1407420, overlap 1407416 TCACGCTGAAAAAAA GACAAAGGGCTAAAATCA AGA TCATTTTAGCCCTTTGTA AACAATTTGGAAGAT TERM 2234 1407450 - 1407416 - T 100 -16 -4.35085 | opp_overlap 1407420, overlap 1407414 ACGCTGAAAAAAAGA CAAAGGGCTAAAATCA AGA TCATTTTAGCCCTTTG TAAACAATTTGGAAG TERM 2235 1407420 - 1407446 + T 86 -11 -3.88583 | opp_overlap 1407416 1407414 TGAAAAAAAGACAAA GGGCTAAAATCA AGA TCATTTTAGCCC TTTGTAAACAATTTG TERM 2236 1407462 - 1407487 + T 89 -6.3 -5.56263 | gap 1, opp_overlap 1407458, overlap 1407460 TTTGTAAACAATTTG GAAGATCCA-TA GGT TATTGGGTCTTC TTTTTATTTTATGAT defB 1408053 - 1407496 - | peptide deformylase TERM 2237 1407527 - 1407547 + g 74 -6.8 -4.24948 | GCAACAGAGTTGTCT GGCTCAGC GAATG GCTGATCC TTTTGAATATGATCA TERM 2238 1407948 - 1407960 + g 77 -4.8 -4.9181 | CGAATTCAATCATAT CAGC TAATT GCTG TTTTTCCTCTTCTGT TERM 2239 1408148 - 1408127 - R 100 -12.3 -4.38369 | CAATGAAATAAAGAA GACCGGTCC TGTG AGACCGGTC AGAGGCTTAAACAGC BPUM_1353 1408534 - 1408166 - | hypothetical protein TERM 2240 1408783 - 1408772 - g 86 -5.8 -5.31877 | AGCTATGAGAAAAAA GAGC AACA GCTC TATAAAAAAATGATT ykyA 1408589 - 1409257 + | lipoprotein TERM 2241 1409243 - 1409276 + F 83 -7.6 -4.56597 | opp_overlap 1409251, overlap 1409251 GCGGCAGATCAAGAG TCGAAAAAGAGCTG AAAAAA CAGCTCTTTTTTTA TTTTTCGACAAAAAC TERM 2242 1409268 - 1409251 - f 79 -7 -4.66953 | opp_overlap 1409243 1409251 TCAAGAGTCGAAAAA GAGCTG AAAAAA CAGCTC TTTTTTTATTTTTCG TERM 2243 1409251 - 1409268 + F 100 -7 -6.20267 | opp_overlap 1409251, overlap 1409243 TCAAGAGTCGAAAAA GAGCTG AAAAAA CAGCTC TTTTTTTATTTTTCG TERM 2244 1410236 - 1410262 + G 90 -7.2 -5.18726 | opp_overlap 1410234, overlap 1410238 ACGAAGGTATCAACT TTGCAGGGGCTT ACA AAGCGCCAGCGA TTTTTGTTGTCCAAA pdhA 1409668 - 1410783 + | pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha TERM 2245 1410868 - 1410849 - g 81 -10.8 -3.29195 | opp_overlap 1410861, overlap 1410846 1410847 1410857 AGAACTGAAAAATGA CGAAAACG TTCT CGTTTTCG GAGAAGACGTTGGTA pdhB 1410787 - 1411764 + | pyruvate dehydrogenase (acetyl-transferring) E1 beta subunit TERM 2246 1411810 - 1411770 - f 77 -8.4 -3.93369 | opp_overlap 1411777 TGAATTTTAATTAAA TGACTGAGGGGAAAAGAA TTTAT TTCTCTTCCCCTTTATCA ATTACATGACCGTGT TERM 2247 1411777 - 1411803 + F 81 -9.5 -3.98083 | opp_overlap 1411770 TAATTAAATGACTGA GGGGAAAAGAA TTTAT TTCTCTTCCCC TTTATCAATTACATG TERM 2248 1412171 - 1412161 - g 75 -5.4 -4.87893 | AAGGCGAAGCAAAAA CTGA AGC TCAG GTACAAGGTACTGCT TERM 2249 1412745 - 1412735 - g 70 -5.4 -4.56597 | TTCTGCTTTGAAAAA GTAC CCA GTAC TTAACACTTCTATCG pdhC 1411872 - 1413215 + | branched-chain alpha-keto acid dehydrogenase subunit E2 TERM 2250 1413657 - 1413645 - g 77 -6.3 -4.61231 | GTACACTTTCAAAAA TGCAA TTC TTGCA ACTGGATCTCGGCCA pdhD 1413220 - 1414632 + | dihydrolipoamide dehydrogenase TERM 2251 1414668 - 1414646 - Tf 100 -14.9 -3.80516 | opp_overlap 1414646 1414662 1414663 1414665, overlap 1414633 AATGAACTTATTAAA CCCCTCTCC TTGAT GGAGAGGGG TTTTTTGAGCGCTGC TERM 2252 1414646 - 1414668 + TF 100 -14.9 -5.02074 | opp_overlap 1414646 1414633, overlap 1414662 1414663 1414665 AATGAACTTATTAAA CCCCTCTCC TTGAT GGAGAGGGG TTTTTTGAGCGCTGC TERM 2253 1414693 - 1414713 + TF 86 -9.7 -4.36262 | opp_overlap 1414694, overlap 1414665 1414663 1414662 1414694 CGCTGCATGAGAAAA ACCCCTCAT TTC ATGAGGGGC TTTTCATATGGATAT TERM 2254 1414712 - 1414694 - Tf 100 -13.2 -4.91109 | opp_overlap 1414665 1414663 1414662 1414693 1414694 GCTGCATGAGAAAAA CCCCTCAT TTC ATGAGGGG CTTTTCATATGGATA TERM 2255 1414694 - 1414712 + TF 95 -13.2 -3.21034 | opp_overlap 1414694, overlap 1414665 1414663 1414662 1414693 GCTGCATGAGAAAAA CCCCTCAT TTC ATGAGGGG CTTTTCATATGGATA slp 1415102 - 1414749 - | peptidoglycan-associated protein BPUM_1360 1415101 - 1415334 + | hypothetical protein TERM 2256 1415354 - 1415332 - TR 73 -2.8 -5.29782 | CATATTCATAAAAAA TAATTAAATG TGT CATACAATTA ACCGTTGACAACTTA TERM 2257 1415535 - 1415506 - TR 73 -3.6 -5.0925 | opp_overlap 1415506 TTTGAAAATGAAAAA GTGACAACAC TATACGGAAC GTGTGGTCAC TGTCATTGCTGTGAT TERM 2258 1415571 - 1415604 + Tr 100 -12.5 -5.27923 | opp_overlap 1415574 1415575, overlap 1415575 CTCTGAATAAATAAA AAAGCATGCAGCTCC ATTT GGGGCTGCATGTTTC TTTTTTATAAAATTG TERM 2259 1415601 - 1415574 - TR 100 -9.8 -5.80003 | opp_overlap 1415571 1415575, overlap 1415575 TGAATAAATAAAAAA GCATGCAGCTCC ATTT GGGGCTGCATGT TTCTTTTTTATAAAA TERM 2260 1415575 - 1415600 + Tr 100 -15.5 -5.13354 | opp_overlap 1415574 1415575, overlap 1415571 GAATAAATAAAAAAG CATGCAGCTCC ATTT GGGGCTGCATG TTTCTTTTTTATAAA TERM 2261 1415600 - 1415575 - TR 100 -13.3 -4.05561 | opp_overlap 1415575 1415571, overlap 1415574 GAATAAATAAAAAAG CATGCAGCTCC ATTT GGGGCTGCATG TTTCTTTTTTATAAA speA 1417099 - 1415609 - | lysine decarboxylase TERM 2262 1416610 - 1416622 + g 75 -3.3 -5.12617 | overlap 1416600 CTTTGGCATCTGGAT GCTCT GTG AGTGC TTTTTTCGCTGATTC yktA 1417272 - 1417541 + | hypothetical protein TERM 2263 1417566 - 1417549 - T 100 -8.4 -5.4833 | opp_overlap 1417549 GTATGTAAGAAAAAA CGAGCC TGTATG GGCTCG TTTCAGACCGTAGAC TERM 2264 1417549 - 1417566 + T 74 -9.1 -3.54424 | opp_overlap 1417549 GTATGTAAGAAAAAA CGAGCCT GTAT GGGCTCG TTTCAGACCGTAGAC TERM 2265 1417575 - 1417621 + T 93 -4.7 -5.75342 | gap 2, opp_overlap 1417585, overlap 1417585 GGGCTCGTTTCAGAC CGTAGACAAACCCTACCTTTACT TCA AGTAAAAGTGGGGTTT-TC-ACA TTTTTTTTGAAAAAC TERM 2266 1417585 - 1417613 + T 88 -11.1 -4.35095 | opp_overlap 1417585, overlap 1417575 CAGACCGTAGACAAA CCCTACCTTTACT TCA AGTAAAAGTGGGG TTTTCACATTTTTTT TERM 2267 1417613 - 1417585 - T 86 -11.1 -4.05747 | opp_overlap 1417585 1417575 CAGACCGTAGACAAA CCCTACCTTTACT TCA AGTAAAAGTGGGG TTTTCACATTTTTTT TERM 2268 1417652 - 1417677 + T 100 -13.4 -3.98747 | ATCATGTGTTTTACG CTGGACATGG TACTTT CCATGTCCAG TTTGCTAGTTTTTTA TERM 2269 1417763 - 1417773 + T 78 -5.4 -5.10933 | GAAGTTTCGTCCAAC GCAT ACC ATGC TTTTCTTTTGCATCC TERM 2270 1418038 - 1418021 - T 81 -9.9 -3.73859 | TACGATAAGAGAGAA TTTGCCC GTTG GGGCAAA TGTAACAATCAAAAT TERM 2271 1418371 - 1418395 + T 91 -9.3 -5.02645 | overlap 1418375 ACATAATAGCCACTC TCTGGGTCAGT TGT ACTGACCTTGA TTTCTTTTGTTTCTT TERM 2272 1418375 - 1418391 + T 84 -10.9 -3.85719 | overlap 1418371 AATAGCCACTCTCTG GGTCAGT TGT ACTGACC TTGATTTCTTTTGTT TERM 2273 1418581 - 1418594 + T 75 -3.1 -5.18357 | gap 1, overlap 1418581 ATGAAGGCGATAGAC GGG-TC AAC GAGCCC TTTTTTCATCGCTTC TERM 2274 1419071 - 1419049 - T 100 -15 -5.39721 | TTATTATACAAAAAA GCTTGTAGAC TTT GTCTACAAGC TGAAACGAGCCTGTA TERM 2275 1419094 - 1419077 - T 73 -8.4 -3.69354 | opp_overlap 1419077 GTCTACAAGCTGAAA CGAGCC TGTATG GGCTCG TTTTTTTATACAGAT TERM 2276 1419077 - 1419094 + T 100 -9.1 -5.61596 | opp_overlap 1419077 GTCTACAAGCTGAAA CGAGCCT GTAT GGGCTCG TTTTTTTATACAGAT BPUM_1363 1419735 - 1419100 - | hypothetical protein BPUM_1364 1420024 - 1420212 + | hypothetical protein TERM 2277 1420250 - 1420231 - f 86 -8.6 -4.67011 | opp_overlap 1420231 AAGGTGAGGTAAAAA CGAACCAA TTCA TCGGTTCG TTTTTGTATGAAGCT TERM 2278 1420231 - 1420250 + F 81 -6.4 -4.9725 | opp_overlap 1420231 AAGGTGAGGTAAAAA CGAACCAA TTCA TCGGTTCG TTTTTGTATGAAGCT TERM 2279 1420965 - 1420950 - g 71 -9 -3.33261 | TCGCAAGCGGCAGAA GTGACG CATA CGTCAC GTTAAGGCTTGCGCC TERM 2280 1421087 - 1421074 - g 77 -4.5 -4.96848 | GTTCCTAGACAAAAA CAGCA TCGT CGCTG GAAATCGATCCGTTT suhB 1420346 - 1421152 + | inositol-phosphate phosphatase TERM 2281 1421185 - 1421154 - T 84 -6 -5.29208 | opp_overlap 1421159, overlap 1421159 AAAATAAAAAATAAA CCAAATCACTTCAT GAGA ATGAAGTGATTTTT TGTGTTTGATGAATT TERM 2282 1421180 - 1421159 - T 89 -10.3 -4.3778 | opp_overlap 1421159, overlap 1421154 AAAAAATAAACCAAA TCACTTCAT GAGA ATGAAGTGA TTTTTTGTGTTTGAT TERM 2283 1421159 - 1421180 + T 100 -10.3 -5.5762 | opp_overlap 1421159 1421154 AAAAAATAAACCAAA TCACTTCAT GAGA ATGAAGTGA TTTTTTGTGTTTGAT TERM 2284 1421270 - 1421300 + T 72 -8.9 -3.37236 | opp_overlap 1421272, overlap 1421271 TTGGCTGAAATAAAA AACCCCCATCTGG ATAAA CCAGGTGGGGGGG TTCTGAGCTTAGCTT TERM 2285 1421271 - 1421299 + T 85 -12.4 -2.6186 | opp_overlap 1421272, overlap 1421270 TGGCTGAAATAAAAA ACCCCCATCTGG ATAAA CCAGGTGGGGGG GTTCTGAGCTTAGCT TERM 2286 1421298 - 1421272 - T 100 -13.7 -5.63517 | opp_overlap 1421271 1421270 GGCTGAAATAAAAAA CCCCCATCTGG ATAAA CCAGGTGGGGG GGTTCTGAGCTTAGC ylaE 1421944 - 1421309 - | hypothetical protein TERM 2287 1422210 - 1422174 - R 89 -10.4 -4.56597 | opp_overlap 1422179, overlap 1422179 TGTTTTGGCCAAAAA TAAAAGCCTCTTACAT ATAGA ATGTAAAAGGCTTTTG AGAAATTTTATGATT TERM 2288 1422205 - 1422179 - R 100 -10.3 -5.26119 | opp_overlap 1422179, overlap 1422174 TGGCCAAAAATAAAA GCCTCTTACAT ATAGA ATGTAAAAGGC TTTTGAGAAATTTTA TERM 2289 1422179 - 1422205 + r 79 -8.1 -4.14013 | opp_overlap 1422179 1422174 TGGCCAAAAATAAAA GCCTCTTACAT ATAGA ATGTAAAAGGC TTTTGAGAAATTTTA ylaF 1422397 - 1422218 - | hypothetical protein typA 1422511 - 1424349 + | GTP-binding protein TERM 2290 1424654 - 1424665 + G 75 -5.8 -4.64613 | CGGAAGGGCTAGTCG TGGC AGCT GCCA TTTTGATTATTTATA ylaH 1424404 - 1424727 + | hypothetical protein TERM 2291 1424765 - 1424721 - T 79 -10.3 -3.22208 | opp_overlap 1424721 1424733, overlap 1424733 AGAAGGAACAGTGAA TACGTAAAAAAAGACCTGA ACTTGTG TCAGGTCTTTTTTTATGTC TTTTGTTCTTTTTTT TERM 2292 1424721 - 1424765 + T 100 -12.5 -5.25154 | opp_overlap 1424721 1424733, overlap 1424733 AGAAGGAACAGTGAA TACGTAAAAAAAGACCTGA ACTTGTG TCAGGTCTTTTTTTATGTC TTTTGTTCTTTTTTT TERM 2293 1424753 - 1424733 - T 93 -6.9 -5.52909 | opp_overlap 1424721 1424733, overlap 1424721 GAATACGTAAAAAAA GACCTGA ACTTGTG TCAGGTC TTTTTTTATGTCTTT TERM 2294 1424733 - 1424753 + T 100 -6.9 -5.82281 | opp_overlap 1424733 1424721, overlap 1424721 GAATACGTAAAAAAA GACCTGA ACTTGTG TCAGGTC TTTTTTTATGTCTTT ylaI 1424989 - 1424759 - | hypothetical protein TERM 2295 1425052 - 1425089 + r 100 -14.4 -4.7458 | opp_overlap 1425057 CTTAAAATCAGCGTA GAAAACGGCTTATATC ACAGGA GATATAAGCCGTTCTC TTTATTTCTTCTGAT TERM 2296 1425084 - 1425057 - R 100 -12.9 -4.41206 | opp_overlap 1425052 AATCAGCGTAGAAAA CGGCTTATATC ACAGGA GATATAAGCCG TTCTCTTTATTTCTT ylaJ 1425708 - 1425091 - | sporulation lipoprotein YlaJ TERM 2297 1426110 - 1426128 + G 77 -4.6 -5.06414 | CTGAATCACCGCTCT TTTCATGA GCT TCAAGAAA TTTTTATTGAAAAAA phoH1 1425879 - 1427171 + | phosphate starvation-induced protein PhoH ylaL 1427666 - 1427187 - | hypothetical protein gls 1427787 - 1428716 + | glutaminase TERM 2298 1428718 - 1428730 + F 81 -3.4 -5.61881 | TGAGTATCTTTTAAT GAAG GAAGG CTTC TTTTTATTTTTACAA TERM 2299 1428959 - 1428974 + G 76 -7.6 -4.21194 | ACGATGCCGCAATGT CCTCTT TATG AAGAGG TTTTAGATACTCAAA ylaN 1428839 - 1429120 + | hypothetical protein TERM 2300 1429157 - 1429131 - f 73 -6.7 -4.25566 | opp_overlap 1429131, overlap 1429124 AATAATGATTGAAAA CTCAAACTTCT TGAAC ATAAGTTTGAG TTTTTTTGTCCTCTA TERM 2301 1429131 - 1429157 + F 100 -6.7 -5.69473 | opp_overlap 1429124 1429131 AATAATGATTGAAAA CTCAAACTTCT TGAAC ATAAGTTTGAG TTTTTTTGTCCTCTA TERM 2302 1430429 - 1430443 + G 71 -8.6 -3.47361 | opp_overlap 1430428 1430438, overlap 1430426 GTTGTATGGGAATAT TGCTGA ATA TCAGCA TGTTTACTGAATATA ftsW 1429327 - 1430538 + | cell division protein FtsW TERM 2303 1431022 - 1431009 - g 71 -2.3 -5.2166 | opp_overlap 1431010, overlap 1431010 1431011 GAAGAAGCGAAAAAA GCTGG AATT CCAGT CATTCCAGGAAGTGA pycA 1430619 - 1434065 + | pyruvate carboxylase TERM 2304 1434073 - 1434094 + F 100 -8.8 -5.40474 | opp_overlap 1434070 1434073 1434077 CCGAATAATAAGTGA GACACATC CAACGT GATGTGTC TTTTTTTGAGCGCAT phrB 1434198 - 1435598 + | deoxyribodipyrimidine photo-lyase TERM 2305 1435629 - 1435605 - T 81 -6.4 -4.96427 | gap 1 CAACAATAAAACAAA TCCCCCAGTCC ATAT GGAA-GGGGGA TACAAATTCTTATTT ctaA 1436562 - 1435639 - | cytochrome c oxidase assembly protein ctaB 1436956 - 1437873 + | protoheme IX farnesyltransferase TERM 2306 1437942 - 1437980 + F 74 -9.1 -3.55378 | gap 1, opp_overlap 1437941, overlap 1437946 1437951 TTTTCTAACAACTAT GAAAGCCGCCTG-ATA TTCAGTTC TATTTAGGCGGCTTTC TGTTTATACATAGAT TERM 2307 1438858 - 1438868 + G 73 -5.4 -4.62069 | AAGTTAAAACGCTTT CTCA AGA TGAG TTTTTAGGATGGACG TERM 2308 1438983 - 1438964 - g 87 -6.4 -5.20783 | ATTTAAAGAGAAAAA CTGCTTGA GCTG TCACGCAG TGGAGCCTGGGGACG ctaC 1438152 - 1439219 + | cytochrome-c oxidase subunit II TERM 2309 1439631 - 1439643 + G 77 -4.7 -4.94058 | overlap 1439640 ACGATGATTTTCCTT GCAGC GAT GCCGC TTTTATTTGCATTAA ctaD 1439391 - 1441262 + | cytochrome-c oxidase subunit I ctaE 1441262 - 1441882 + | cytochrome-c oxidase subunit III TERM 2310 1441981 - 1441944 - g 100 -7.2 -5.61881 | opp_overlap 1441945 1441951, overlap 1441945 CCGTAAAAAGAAAAA TGCCG-AAGAAATGAAGC ATCA GCT-CATTTCTTTCGGCT TGATGATTGGATTAA TERM 2311 1441945 - 1441980 + G 81 -10.7 -3.28984 | opp_overlap 1441944 1441945, overlap 1441951 CGTAAAAAGAAAAAT GCCG-AAGAAATGAAGC ATCA GCT-CATTTCTTTCGGC TTGATGATTGGATTA TERM 2312 1441980 - 1441945 - g 90 -10.7 -3.95502 | opp_overlap 1441945 1441951, overlap 1441944 CGTAAAAAGAAAAAT GCCG-AAGAAATGAAGC ATCA GCT-CATTTCTTTCGGC TTGATGATTGGATTA TERM 2313 1442139 - 1442125 - g 74 -4.2 -4.91873 | opp_overlap 1442131 CACATGAACCAAAAA GGGCAT GAA ACACCC GCATTGTTTCTTTAT ctaF 1441885 - 1442214 + | cytochrome-c oxidase subunit IV TERM 2314 1442690 - 1442701 + G 71 -4.4 -4.88067 | TTTATCATGCGCTGA TGAC AGTA GTCA TTTTTATCGCTGCCT ctaG 1442245 - 1443123 + | cytochrome c oxidase subunit TERM 2315 1443148 - 1443129 - T 100 -13.6 -5.31059 | opp_overlap 1443129 ATATGAATGAAAAAA GCACAGCC ATAT GGCTGTGC TTTCGTTTATGCTTC TERM 2316 1443129 - 1443148 + T 100 -13.6 -4.17789 | opp_overlap 1443129 ATATGAATGAAAAAA GCACAGCC ATAT GGCTGTGC TTTCGTTTATGCTTC ylbA 1443520 - 1443155 - | hypothetical protein ylbB 1443682 - 1444104 + | cystathionine beta-synthase ylbC 1444229 - 1445272 + | hypothetical protein TERM 2317 1445304 - 1445275 - f 74 -10.1 -2.82892 | opp_overlap 1445280, overlap 1445280 AAAAACATCTTAAAC GAAAACAGCTGCA CCAT CGCAGCTGTTTTT TTGTTTCAAAAAAGA TERM 2318 1445299 - 1445280 - f 89 -10 -4.55798 | opp_overlap 1445280, overlap 1445275 CATCTTAAACGAAAA CAGCTGCA CCAT CGCAGCTG TTTTTTTGTTTCAAA TERM 2319 1445280 - 1445299 + F 100 -9.3 -5.95539 | opp_overlap 1445280 1445275 CATCTTAAACGAAAA CAGCTGC ACCATC GCAGCTG TTTTTTTGTTTCAAA TERM 2320 1445414 - 1445403 - g 74 -4.4 -4.98128 | ACAAGCAAAAACAAA CATC CATT GATG AATTTAAACAATTCG ylbD 1445381 - 1445794 + | hypothetical protein ylbE 1445814 - 1446062 + | hypothetical protein BPUM_1391 1446135 - 1446542 + | hypothetical protein ylbF 1446600 - 1447049 + | hypothetical protein TERM 2321 1447048 - 1447069 + F 86 -10.2 -4.21462 | GCTGTAAAGTATCTT GACGAGAC TTGAAT GTCTCGTC TTTTACATAATAACT ylbG 1447116 - 1447388 + | hypothetical protein TERM 2322 1447425 - 1447402 - f 100 -10.9 -5.82281 | opp_overlap 1447400 1447403, overlap 1447403 AAAGACACAAAAAAA CCCCCGCGG CATCAC CCGCGGGGT CCTTCTATTCTTAAT TERM 2323 1447403 - 1447424 + F 95 -14.4 -2.99178 | opp_overlap 1447403 1447402, overlap 1447400 AAGACACAAAAAAAC CCCCGCGG CATCAC CCGCGGGG TCCTTCTATTCTTAA TERM 2324 1447424 - 1447403 - f 100 -14.4 -4.05708 | opp_overlap 1447400 1447403, overlap 1447402 AAGACACAAAAAAAC CCCCGCGG CATCAC CCGCGGGG TCCTTCTATTCTTAA ylbH 1447699 - 1448256 + | site-specific DNA-methyltransferase (adenine-specific) coaD 1448260 - 1448742 + | phosphopantetheine adenylyltransferase TERM 2325 1448767 - 1448731 - T 91 -9.5 -4.96848 | opp_overlap 1448737, overlap 1448737 GCGTTGATAGAAAAA TTTAAAGGATGAGTGCA ACG TGCACTCATCCTTTTTT TACTTTTTGATAGTA TERM 2326 1448737 - 1448761 + T 100 -17.3 -5.85011 | opp_overlap 1448731 1448737 ATAGAAAAATTTAAA GGATGAGTGCA ACG TGCACTCATCC TTTTTTTACTTTTTG TERM 2327 1448761 - 1448737 - T 100 -17.3 -4.03989 | opp_overlap 1448737, overlap 1448731 ATAGAAAAATTTAAA GGATGAGTGCA ACG TGCACTCATCC TTTTTTTACTTTTTG ylbJ 1449964 - 1448756 - | sporulation integral membrane protein YlbJ ylbK 1450123 - 1450902 + | alpha/beta fold family hydrolase TERM 2328 1450926 - 1450936 + G 79 -3.2 -5.32882 | AAAAATTAAATATTC GCTG GCT TAGC TTTTTTGTCGTGATC TERM 2329 1451442 - 1451429 - g 71 -2.3 -5.19212 | opp_overlap 1451430, overlap 1451430 ATCAGCAGCAAAAAA GCAGG TACA CCTGT CCGTTTTGTCCTTGA ylbL 1450907 - 1451935 + | peptidase TERM 2330 1451979 - 1451930 - T 95 -13.9 -3.18509 | opp_overlap 1451943, overlap 1451943 TTAAAAGAGAAAGCA TCTTAATCAAAAAGAGCAACCTT TATA AAGGCTGCTCTTTTTTGCTAAGA CTGGAAGAGACCAGT TERM 2331 1451943 - 1451966 + T 91 -9.6 -5.14965 | opp_overlap 1451930 1451943 CATCTTAATCAAAAA GAGCAACCTT TATA AAGGCTGCTC TTTTTTGCTAAGACT TERM 2332 1451966 - 1451943 - T 100 -11.8 -4.87291 | opp_overlap 1451943, overlap 1451930 CATCTTAATCAAAAA GAGCAACCTT TATA AAGGCTGCTC TTTTTTGCTAAGACT ylbM 1453398 - 1451974 - | hypothetical protein TERM 2333 1452600 - 1452611 + g 78 -2.2 -5.46698 | CTTTTCGTATACTTG TTGC GCTT GCGA TTTTTTGATTTTCAG TERM 2334 1453834 - 1453824 - g 71 -6.8 -4.22346 | CAAACTGACGTAAAA GGTG CTG CACC ACAAGAAGGGAATGA ylbN 1453425 - 1453943 + | hypothetical protein rpmF 1453965 - 1454138 + | 50S ribosomal protein L32 TERM 2335 1454140 - 1454189 + F 82 -9.5 -4.17355 | opp_overlap 1454154, overlap 1454154 TAAAAAGCAACTAAT GCTTGATAAAAAAACGTGAGGGA ATCT TCCCTTGCGTTTTTTTATTTGTC TATTTTTTACGATTC TERM 2336 1454154 - 1454175 + F 100 -8.7 -6.04953 | opp_overlap 1454154, overlap 1454140 TGCTTGATAAAAAAA CGTGAGGGA ATCT TCCCTTGCG TTTTTTTATTTGTCT TERM 2337 1454175 - 1454154 - f 84 -4.3 -5.60993 | opp_overlap 1454154 1454140 TGCTTGATAAAAAAA CGTGAGGGA ATCT TCCCTTGCG TTTTTTTATTTGTCT gerR 1454277 - 1454816 + | negative regulator of SigE regulon TERM 2338 1454822 - 1454847 + T 84 -9 -4.4648 | opp_overlap 1454820 1454818 1454822 TGCTAAATAAAGAGA CGCCCCTC ACAGAGAAAG GAGGGGCG TTTTGTGATCAGCCT TERM 2339 1454847 - 1454822 - T 74 -9 -3.48884 | opp_overlap 1454822, overlap 1454820 1454818 TGCTAAATAAAGAGA CGCCCCTC ACAGAGAAAG GAGGGGCG TTTTGTGATCAGCCT ylbP 1455342 - 1454863 - | hypothetical protein ylbQ 1455551 - 1456450 + | 2-dehydropantoate 2-reductase yllA 1456515 - 1458134 + | hypothetical protein TERM 2340 1458152 - 1458168 + F 100 -8 -6.22802 | opp_overlap 1458152 TAAAGTTTTAATGAA CCCTGA CTAGT TCAGGG TTTTTTTTTATGGAG mraZ 1458308 - 1458694 + | hypothetical protein mraW 1458761 - 1459693 + | S-adenosyl-methyltransferase MraW ftsL 1459731 - 1460078 + | cell division protein TERM 2341 1460112 - 1460148 + G 81 -4.4 -5.40464 | gap 1, opp_overlap 1460116, overlap 1460106 1460116 GAATAAAATGATGAA CAGAGGCGCGGCAATTG CAAG TATTTGCTTCGCC-CTG TTTTTCTTTATCATC ftsI 1460086 - 1462236 + | peptidoglycan glycosyltransferase TERM 2342 1462244 - 1462264 + F 100 -9.8 -5.82172 | opp_overlap 1462244 CAAATTAACTTGAAA CCTAGCAA ATCAC TTGCTAGG TTTTTTTCTGTTGCT TERM 2343 1462264 - 1462244 - f 81 -10.5 -3.70505 | opp_overlap 1462244 CAAATTAACTTGAAA CCTAGCAAA TCA CTTGCTAGG TTTTTTTCTGTTGCT spoVD 1462363 - 1464282 + | stage V sporulation protein D TERM 2344 1464296 - 1464324 + F 75 -4.6 -5.06414 | gap 1, opp_overlap 1464296 1464299, overlap 1464299 1464314 1464315 AATAAAGAATAAACA GAGGGTAGCCGCA CTCA TTTGGCTACC-TC TTTTTGTTGAAAGAG TERM 2345 1464299 - 1464322 + F 73 -7.4 -4.16307 | opp_overlap 1464296 1464299, overlap 1464296 1464314 1464315 AAAGAATAAACAGAG GGTAGCCGCA CTCA TTTGGCTACC TCTTTTTGTTGAAAG murE 1464489 - 1465970 + | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase mraY 1466106 - 1467080 + | phospho-N-acetylmuramoyl-pentapeptide-transferase murD 1467081 - 1468436 + | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase spoVE 1468496 - 1469596 + | stage V sporulation protein E TERM 2346 1469658 - 1469708 + F 78 -9.5 -3.67068 | opp_overlap 1469675, overlap 1469661 ATAAAAAAATGATTT GAAGAGTGAAAATGACA-GTTTTTG TTT CGAAAACGTGT-ATTTTGACTCTTC TTTACAGGTTTTAAT TERM 2347 1469728 - 1469747 + F 79 -7.9 -4.20981 | opp_overlap 1469727 CAGGTTTTAATGGAG CCCTGTT GTTTAA AACAGGG TTTATACTTTGTTCA TERM 2348 1470810 - 1470795 - g 74 -4.7 -4.78572 | TGGTAATGAAGAAAA GCTCA ACCAAA TGAGC CGTTTAACGAAAGAA murG 1469794 - 1470888 + | N-acetylglucosaminyl transferase murB 1470920 - 1471831 + | UDP-N-acetylenolpyruvoylglucosamine reductase TERM 2349 1471898 - 1471863 - f 100 -17.9 -3.48668 | opp_overlap 1471868 1471872, overlap 1471868 1471872 ATGATCACATCAGAA GAAAACAAACGGCAT GAAAGA ATGCCGTTTGTTTTC TCATCAAAATGATGA TERM 2350 1471868 - 1471893 + F 100 -12 -4.4648 | opp_overlap 1471868 1471863 1471872, overlap 1471872 CACATCAGAAGAAAA CAAACGGCAT GAAAGA ATGCCGTTTG TTTTCTCATCAAAAT TERM 2351 1471893 - 1471868 - f 100 -12 -4.82819 | opp_overlap 1471868 1471872, overlap 1471863 1471872 CACATCAGAAGAAAA CAAACGGCAT GAAAGA ATGCCGTTTG TTTTCTCATCAAAAT TERM 2352 1471872 - 1471889 + F 81 -7 -4.80453 | opp_overlap 1471872 1471868 1471863, overlap 1471868 TCAGAAGAAAACAAA CGGCAT GAAAGA ATGCCG TTTGTTTTCTCATCA TERM 2353 1471889 - 1471872 - f 83 -7 -4.92812 | opp_overlap 1471868 1471872, overlap 1471868 1471863 TCAGAAGAAAACAAA CGGCAT GAAAGA ATGCCG TTTGTTTTCTCATCA divIB 1471959 - 1472738 + | cell-division initiation protein ylxW 1472735 - 1473424 + | hypothetical protein ylxX 1473445 - 1474170 + | hypothetical protein sbp 1474170 - 1474538 + | hypothetical protein ftsA 1474698 - 1476020 + | cell division ATP-binding protein FtsA ftsZ 1476054 - 1477199 + | cell division protein FtsZ TERM 2354 1477215 - 1477233 + F 100 -14.6 -5.24989 | TCAAGTATCGCTTAA CCCCTTCC ATT GGAAGGGG TTTTTTCATGTCTCA BPUM_1423 1477491 - 1480967 + | peptidase TERM 2355 1481001 - 1480979 - f 73 -4.2 -4.94058 | gap 1, opp_overlap 1480979, overlap 1480974 GTAATTTAAACAAAA GACACGACT TCTAGG AG-CGTGTC TTTTTTCTTTCAAAA TERM 2356 1480979 - 1481001 + F 85 -4.9 -5.63517 | gap 1, opp_overlap 1480979 1480974 GTAATTTAAACAAAA GACACGACTT CTAG GAG-CGTGTC TTTTTTCTTTCAAAA BPUM_1424 1480997 - 1481188 + | hypothetical protein spoIIGA 1481201 - 1482130 + | stage II sporulation U4 family membrane protease sigE 1482189 - 1482908 + | sporulation sigma factor SigE TERM 2357 1483393 - 1483383 - g 75 -8.2 -3.78934 | opp_overlap 1483383 CTTGCGTGATAACAA CCCG ATT CGGG TGTCTCGCTCACTAA sigG 1483051 - 1483830 + | sporulation sigma factor SigG TERM 2358 1483835 - 1483851 + F 89 -6.5 -5.39221 | opp_overlap 1483832 ACATCTTTTAAAGCC GCCGC TTCATGT GCGGC TTTTTTCATTCTTAT BPUM_1428 1483982 - 1484920 + | transcriptional regulator TERM 2359 1484921 - 1484941 + F 100 -11.3 -5.54264 | opp_overlap 1484921 1484917, overlap 1484937 GCCTTATTAAAGTAA CTACCTAAT ATC ATTAGGTAG TTTTTTTGAGTCTTT TERM 2360 1484941 - 1484921 - f 83 -11.3 -3.56704 | opp_overlap 1484921 1484937, overlap 1484917 GCCTTATTAAAGTAA CTACCTAAT ATC ATTAGGTAG TTTTTTTGAGTCTTT TERM 2361 1485060 - 1485049 - f 70 -3 -5.06089 | AAATGATAAATAAAA TAAC AAAT GTTA CAAGAAACAGATTTT BPUM_1429 1485165 - 1486409 + | homoserine dehydrogenase BPUM_1430 1486422 - 1486853 + | hypothetical protein BPUM_1431 1486872 - 1487402 + | PTS family glucitol (Glu) porter component IIC BPUM_1432 1487416 - 1488426 + | PTS family glucitol (Glu) porter component IIB BPUM_1433 1488453 - 1488809 + | PTS family glucitol (Glu) porter component IIA TERM 2362 1488848 - 1488817 - f 74 -8.8 -3.66178 | opp_overlap 1488822, overlap 1488822 TTTCGTAACGTTAAA GAAAAGCTGTTCCT CAAA AGGAGCAGCTTTTT TATATGAGGTTTACC TERM 2363 1488843 - 1488822 - f 91 -8.7 -4.90525 | opp_overlap 1488822, overlap 1488817 TAACGTTAAAGAAAA GCTGTTCCT CAAA AGGAGCAGC TTTTTTATATGAGGT TERM 2364 1488822 - 1488843 + F 100 -10.9 -5.37043 | opp_overlap 1488822 1488817 TAACGTTAAAGAAAA GCTGTTCCT CAAA AGGAGCAGC TTTTTTATATGAGGT ylmA 1488936 - 1489715 + | ABC transporter ATP-binding protein ylmC 1489795 - 1490031 + | hypothetical protein ylmD 1490268 - 1491107 + | hypothetical protein TERM 2365 1491457 - 1491445 - g 75 -3.3 -5.22943 | ATGAAATTGAAAAAA GAGTG GAT CACAC GGTTCGCTGTTTTGT ylmE 1491114 - 1491803 + | hypothetical protein ylmF 1491805 - 1492263 + | hypothetical protein ylmG 1492270 - 1492551 + | hypothetical protein TERM 2366 1492562 - 1492582 + F 86 -11.1 -4.18018 | TGTAGACAGGCTGCC GGGCTTGGC GCT GCCAGGCTC TTTTACATAAAAGGG ylmH 1492605 - 1493381 + | hypothetical protein divIVA 1493408 - 1493902 + | cell-division initiation protein TERM 2367 1494177 - 1494206 + F 100 -16.5 -6.04419 | opp_overlap 1494177 GGTACCGCGAGACAA GCCTTCTCGTCCC TTAT GGGATGAGAGGGC TTTTTTTATTGTTTT TERM 2368 1494206 - 1494177 - f 90 -12.1 -3.49475 | opp_overlap 1494177 GGTACCGCGAGACAA GCCTTCTCGTCCC TTAT GGGATGAGAGGGC TTTTTTTATTGTTTT TERM 2369 1494810 - 1494799 - g 70 -5.8 -4.40993 | opp_overlap 1494799 TACAAAGGATTAAAA CCAG TTAA CTGG TCTCCTTCAAGTGAG TERM 2370 1495558 - 1495570 + G 72 -6.2 -4.24948 | TGGGTGCCAGCATGG GGCG AGACA CGCC TTTTCAATATGGTGC ileS 1494253 - 1497018 + | isoleucyl-tRNA synthetase TERM 2371 1497061 - 1497039 - f 86 -11.9 -2.86181 | opp_overlap 1497040, overlap 1497036 TGATAAGACCAACTA GCGCCCCGC CATAT GCGGGGCGT TTTCTTTTTTGCGAA TERM 2372 1497040 - 1497060 + F 100 -15.4 -5.42198 | opp_overlap 1497039 1497036 GATAAGACCAACTAG CGCCCCGC CATAT GCGGGGCG TTTTCTTTTTTGCGA ylyA 1497179 - 1497553 + | hypothetical protein TERM 2373 1497540 - 1497558 + F 73 -3.8 -5.03994 | ATTCTCATTTTGAAG CCTTCC ACATGTA GGGAGG TTTTTGTCTGTCAAC lspA 1497648 - 1498115 + | lipoprotein signal peptidase ylyB 1498112 - 1499026 + | pseudouridylate synthase TERM 2374 1499135 - 1499114 - f 70 -8.1 -3.23979 | AGGATAACGGATCAA TTTGTGCAC GTGT ATGCACAAA TGAACGCCCCTCTCT TERM 2375 1499169 - 1499140 - f 74 -8.6 -3.61988 | gap 1, opp_overlap 1499141, overlap 1499136 1499141 GTATGCACAAATGAA CGCCCCTCTCTGC CCTTT GCAGA-AGGGGCT TTTTATTTGTCAAAA TERM 2376 1499141 - 1499168 + F 100 -12.1 -5.38054 | gap 1, opp_overlap 1499140 1499136 1499141 TATGCACAAATGAAC GCCCCTCTCTGC CCTTT GCAGA-AGGGGC TTTTTATTTGTCAAA TERM 2377 1499168 - 1499141 - f 86 -12.1 -2.76711 | gap 1, opp_overlap 1499141, overlap 1499140 1499136 TATGCACAAATGAAC GCCCCTCTCTGC CCTTT GCAGA-AGGGGC TTTTTATTTGTCAAA TERM 2378 1499723 - 1499713 - g 74 -6.8 -4.39287 | opp_overlap 1499712 TGAAGTAGATCAAAA CGAC CTT GTCG CTATATATGAAAAAT pyrR 1499198 - 1499740 + | pyrimidine regulatory protein PyrR TERM 2379 1499829 - 1499856 + F 100 -12.1 -5.14563 | GTACGGTTTTTCTAG GCCTCTTTGCG CATACT TGCAAAGAGGC TTTTTTAATGAAAAA pyrP 1499895 - 1501223 + | NCS2 family nucleobase:cation symporter-2 TERM 2380 1501307 - 1501285 - f 75 -9.2 -3.28712 | opp_overlap 1501285 GCTTCTTTTGGAGAA CCCTAAGC TGCCGAG GCTTAGGG TTTTTTTGAACCTGA TERM 2381 1501285 - 1501307 + F 100 -9.9 -5.42259 | opp_overlap 1501285 GCTTCTTTTGGAGAA CCCTAAGCT GCCGA GGCTTAGGG TTTTTTTGAACCTGA pyrB 1501353 - 1502276 + | aspartate carbamoyltransferase catalytic subunit TERM 2382 1503040 - 1502998 - g 95 -7.1 -5.47218 | opp_overlap 1502998 1502996 CGCGATGCAAAAAAA GCAGGC-ATCCGCGTGACAGC AGA GGTGTCAC-CGCATCACCTGC TCTTATGTGATGCCG pyrC 1502260 - 1503546 + | dihydroorotase pyrAA 1503543 - 1504637 + | carbamoyl phosphate synthase small subunit TERM 2383 1506173 - 1506159 - g 74 -6.4 -4.46073 | opp_overlap 1506159 CGCTAAGACAAGAAA CAGGCA TCG TACCTG TTTACAAAATGGTAG carB2 1504622 - 1507837 + | carbamoyl phosphate synthase large subunit pyrK 1507834 - 1508610 + | dihydroorotate dehydrogenase electron transfer subunit TERM 2384 1509388 - 1509400 + GF 80 -7.7 -4.37658 | overlap 1509383 CGAGTGCAGTAGCTG TTGGC ACA GCCAA TTTTGTGAACCCATT pyrD 1508604 - 1509536 + | dihydroorotate dehydrogenase 1B pyrF 1509508 - 1510212 + | orotidine 5'-phosphate decarboxylase pyrE 1510220 - 1510858 + | orotate phosphoribosyltransferase TERM 2385 1510881 - 1510862 - f 89 -10 -4.60924 | opp_overlap 1510862 GAAACCGTCTAAAAA GCTGTGCA CAAT CGCACAGC TTTTTTTATTTGGTT TERM 2386 1510862 - 1510881 + F 100 -9.3 -6.01187 | opp_overlap 1510862 GAAACCGTCTAAAAA GCTGTGC ACAATC GCACAGC TTTTTTTATTTGGTT TERM 2387 1511120 - 1511142 + F 100 -7.8 -6.11229 | overlap 1511090 CGTGAGCTTCCTCAT CTTTCTTTCG GAC TGAAAGGAAG TTTTTTTATTTTAAT cysH 1511336 - 1512037 + | phosphoadenylyl-sulfate reductase (thioredoxin) TERM 2388 1512760 - 1512739 - g 100 -8.7 -4.96468 | CAAATGGAAAGAAAA TCACCCGCT ATCA AACGGGCGA AGGGATATTGCTTTC TERM 2389 1512931 - 1512944 + G 73 -3.8 -4.92314 | AAATGCTGAAAGTGT GGGT AGTATC ACCC TTTTTATCACTTAGT cysP 1512051 - 1513115 + | PiT family inorganic phosphate transporter sat 1513171 - 1514307 + | sulfate adenylyltransferase cysC 1514322 - 1514915 + | adenylyl-sulfate kinase TERM 2390 1514919 - 1514907 - f 82 -4.8 -5.48213 | overlap 1514917 TATGTAAAAGAAAAA GCGA AATAA TCGC CTGATGGCAGGGGGA cysG 1514945 - 1515700 + | uroporphyrin-III C-methyltransferase TERM 2391 1515741 - 1515711 - f 77 -6.8 -4.54323 | opp_overlap 1515716 AATGAGAATAATAAA GAAGAGACACGTAC ATT GATCGTGTCTTTTC GTCTGAACAAAACAA TERM 2392 1515914 - 1515930 + G 71 -6.6 -4.16251 | TTAGAACTGACAGCC CCTTCT ATAGA AGAAGG TTTTGAAGCTTGTGT TERM 2393 1515983 - 1515953 - g 71 -3.3 -5.00616 | gap 1 GCTTGTGTGAAAAAA GGAGCGACACACAT TGCG AT-CGTCCCGCTCC TCCTTTTAACTGCTA TERM 2394 1516119 - 1516109 - g 76 -6.8 -4.50943 | CAAGAAGTGACAAAA GCAG TTG CTGC AAGAATTGAAGAAGC cbiX 1515776 - 1516561 + | sirohydrochlorin cobaltochelatase BPUM_1462 1516542 - 1517045 + | precorrin-2 dehydrogenase TERM 2395 1517036 - 1517072 + T 88 -11.1 -4.20868 | opp_overlap 1517038, overlap 1517038 AAAACAACAAAGAAA AAGCCGATAAAATCT CCTTAAA AGATTTTATCGGCTA TTATTATTTTCGGAG TERM 2396 1517038 - 1517070 + T 100 -13.7 -3.69534 | opp_overlap 1517038, overlap 1517036 AACAACAAAGAAAAA GCCGATAAAATCT CCTTAAA AGATTTTATCGGC TATTATTATTTTCGG TERM 2397 1517070 - 1517038 - T 100 -15.1 -5.52807 | opp_overlap 1517038 1517036 AACAACAAAGAAAAA GCCGATAAAATCTCC TTA AAAGATTTTATCGGC TATTATTATTTTCGG BPUM_1463 1518785 - 1517076 - | fibronectin binding protein A yloB 1518950 - 1521625 + | P-ATPase superfamily P-type ATPase cation transporter TERM 2398 1521647 - 1521668 + F 91 -8.1 -5.17786 | ATGGTATAATTTTGA GGTAATAGT GTCT GCTATTACC TTTTTCATTTTATTA yloC 1521709 - 1522584 + | hypothetical protein BPUM_1466 1522661 - 1522930 + | hypothetical protein TERM 2399 1523269 - 1523247 - g 89 -11.4 -3.53091 | overlap 1523234 ATGTTTTCCTTGAAA TCGAAGTGCA AGG TGCACTTCAA GTAAGAGAAGCATTT gmk 1522940 - 1523554 + | guanylate kinase rpoZ 1523558 - 1523761 + | DNA-directed RNA polymerase subunit omega TERM 2400 1523792 - 1523762 - f 79 -9 -4.00445 | opp_overlap 1523766, overlap 1523789 GAGGATCAAGAATAA CACATCGCTTCTGC TAT GCAGATACGATACG TTCAAAAAAGTCAAA TERM 2401 1523839 - 1523789 - f 78 -10.9 -2.7035 | gap 1, opp_overlap 1523802, overlap 1523762 1523802 GCTATGCAGATACGA TAC-GTTCAAAAAAGTCAAAACTA TGAT TGGTTTTGACTTTTTTGAATTGTA GACGAATTTGTGAAA TERM 2402 1523825 - 1523802 - f 83 -6.8 -5.04385 | opp_overlap 1523802, overlap 1523789 GATACGTTCAAAAAA GTCAAAACTA TGAT TGGTTTTGAC TTTTTTGAATTGTAG TERM 2403 1523802 - 1523825 + F 100 -9 -5.1925 | opp_overlap 1523802 1523789 GATACGTTCAAAAAA GTCAAAACTA TGAT TGGTTTTGAC TTTTTTGAATTGTAG coaBC 1523879 - 1525096 + | bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase TERM 2404 1526597 - 1526560 - g 71 -4.3 -4.86731 | opp_overlap 1526579 GTGCTTGAAAGAAAA GAACAAGCCGTCTTATT TCTG AATAAAAGGGGTTATTC ATCCTTTGTGATGTG priA 1525093 - 1527501 + | primosome assembly protein PriA TERM 2405 1527607 - 1527597 - g 75 -5.4 -4.83615 | opp_overlap 1527597 TACGTTCGATAAAAA GCTT AAA AAGC TACTTGATGATATGT TERM 2406 1527861 - 1527844 - g 70 -5.6 -4.2803 | overlap 1527860 TATGTGAAGGTAAAA GCCTTT GATAAG AAAGGC AAACCATTTACAATA def 1527517 - 1527999 + | peptide deformylase fmt 1528005 - 1528958 + | methionyl-tRNA formyltransferase rsmB 1528945 - 1530288 + | rRNA SAM-dependent methyltransferase RmsB TERM 2407 1530553 - 1530542 - g 73 -5.8 -4.49556 | CCGTGATCAAACAAA CGTC TCAA GACG GTACGATCAAGTTTT BPUM_1474 1530292 - 1531374 + | Fe-S-cluster redox protein TERM 2408 1531497 - 1531541 + G 100 -13 -3.9122 | gap 1, overlap 1531501 TGTAGCAGACGGCAT GGGA-GGTCATCTTGCTGGTG ATGT CGCCAGCAAGATGGCAGTCTC TTCTTTAAAAGAATA TERM 2409 1531501 - 1531536 + G 100 -14.8 -2.60309 | overlap 1531497 GCAGACGGCATGGGA GGTCATCTTGCTGGTG ATGT CGCCAGCAAGATGGCA GTCTCTTCTTTAAAA prpC 1531378 - 1532148 + | serine/threonine phosphatase TERM 2410 1533081 - 1533064 - g 76 -2.6 -5.3671 | overlap 1533066 AAGACAATGAAAAAA CAGCCG TCCACC CGGCTC AAAAACCGAAGAAAA prkC 1532142 - 1534097 + | serine/threonine kinase yloQ 1534110 - 1535006 + | ribosome-associated GTPase rpe 1535010 - 1535660 + | ribulose-phosphate 3-epimerase TERM 2411 1535694 - 1535667 - f 78 -10.8 -2.78526 | gap 1, opp_overlap 1535667, overlap 1535666 1535662 GAAGCATAAAGGAAG GAACCAAAG-TCA TTG TGATCTTTGGTTC TTTTTACATGAAGAG TERM 2412 1535667 - 1535694 + F 90 -10.8 -4.65895 | gap 1, opp_overlap 1535667 1535666 1535662 GAAGCATAAAGGAAG GAACCAAAG-TCA TTG TGATCTTTGGTTC TTTTTACATGAAGAG yloS 1535721 - 1536365 + | thiamin pyrophosphokinase spoVM 1536437 - 1536517 + | stage V sporulation protein M TERM 2413 1536575 - 1536548 - T 100 -18.6 -4.9725 | opp_overlap 1536548 ATTTCCACATAAAAA CGCCTGCTACAA GTTA TTGTAGCAGGCG TTTACTCTTGCTTAT TERM 2414 1536548 - 1536575 + T 100 -18.6 -3.97812 | opp_overlap 1536548 ATTTCCACATAAAAA CGCCTGCTACAA GTTA TTGTAGCAGGCG TTTACTCTTGCTTAT rpmB 1536775 - 1536587 - | 50S ribosomal protein L28 TERM 2415 1536714 - 1536736 + g 76 -2.7 -5.35224 | gap 1, overlap 1536717 TTTGTAGAGTTCATT GCGTGAGAAC GATT GTTCCCA-GC TTTTGTTTTTCTGCC BPUM_1482 1537047 - 1537409 + | hypothetical protein TERM 2416 1537876 - 1537854 - g 100 -12 -4.50627 | opp_overlap 1537843, overlap 1537855 GATGCAGCAAAGAAA GCGGTTGCTG TTT CAGCAACCGA AAATGACATTGACCG TERM 2417 1537875 - 1537855 - g 100 -15.5 -3.29653 | opp_overlap 1537843, overlap 1537854 ATGCAGCAAAGAAAG CGGTTGCTG TTT CAGCAACCG AAAATGACATTGACC BPUM_1483 1537425 - 1539104 + | glycerone kinase TERM 2418 1539107 - 1539133 + F 73 -6.6 -4.24443 | opp_overlap 1539110 1539113, overlap 1539110 GGCTGTGGAATAACG AAAGAAGGGC AAATAAA GCCCTTCTTC TTCTTTTGCAATTTT TERM 2419 1539110 - 1539130 + F 82 -8.3 -4.21471 | opp_overlap 1539110 1539113, overlap 1539107 TGTGGAATAACGAAA GAAGGGC AAATAAA GCCCTTC TTCTTCTTTTGCAAT TERM 2420 1539130 - 1539110 - f 79 -8.3 -4.07618 | opp_overlap 1539110 1539107, overlap 1539113 TGTGGAATAACGAAA GAAGGGC AAATAAA GCCCTTC TTCTTCTTTTGCAAT sdaAB 1539254 - 1539916 + | L-serine ammonia-lyase beta chain sdaAA 1539937 - 1540839 + | L-serine ammonia-lyase alpha chain TERM 2421 1540907 - 1540927 + G 74 -7.6 -4.0127 | opp_overlap 1540907 CTTGGGATCCACACA GTAGCCGA TTTAC TTGGCTAC TTTCCTTATCGATAT TERM 2422 1541075 - 1541048 - g 100 -7.8 -5.48825 | gap 1, opp_overlap 1541052, overlap 1541052 TATTATGGAAAAAAA CGAAGCAGGCTGA CAT TCAGGCTGCTT-G TCGGGCGTTTCCTCA TERM 2423 1541052 - 1541072 + G 76 -9.7 -3.32294 | opp_overlap 1541048 1541052 ATGGAAAAAAACGAA GCAGGCTGA CAT TCAGGCTGC TTGTCGGGCGTTTCC TERM 2424 1541072 - 1541052 - g 86 -9.7 -4.04789 | opp_overlap 1541052, overlap 1541048 ATGGAAAAAAACGAA GCAGGCTGA CAT TCAGGCTGC TTGTCGGGCGTTTCC recG 1540817 - 1542865 + | DNA helicase RecG ylpC 1542978 - 1543544 + | fatty acid biosynthesis transcriptional regulator TERM 2425 1543932 - 1543957 + G 82 -3.1 -5.5112 | overlap 1543933 CCAGCGCTTGCTCCG ACACTGCCAAC ACTT GATGGCAGCGG TTTTTTATTACTAGA TERM 2426 1544037 - 1544049 + G 70 -5.5 -4.57073 | ATGATGGGTTCAATT TACGC AGA GCGTG TTTTTCCAAAGAGTA plsX 1543560 - 1544558 + | putative glycerol-3-phosphate acyltransferase PlsX fabD 1544574 - 1545518 + | [Acyl-carrier-protein] S-malonyltransferase fabG1 1545518 - 1546261 + | 3-oxoacyl-[acyl-carrier-protein] reductase acpP 1546343 - 1546576 + | acyl carrier protein TERM 2427 1546611 - 1546587 - f 85 -9.4 -4.22591 | gap 1, opp_overlap 1546587 AATAAGCGTAACAAA GTCCCGTCTAT TTTC AT-GACGGGAC TTTCAAAATTTATGT TERM 2428 1546587 - 1546611 + F 78 -9.4 -3.65828 | gap 1, opp_overlap 1546587 AATAAGCGTAACAAA GTCCCGTCTAT TTTC AT-GACGGGAC TTTCAAAATTTATGT rnc 1546761 - 1547504 + | ribonuclease III TERM 2429 1547533 - 1547502 - f 77 -9.6 -3.43785 | opp_overlap 1547502 1547507 1547521, overlap 1547507 CATCATATGAACCAA TAAAATCCCCCT CGTGATTC AGGGGGATTTCA CTCTGTTTTCCATCA TERM 2430 1547528 - 1547507 - f 81 -7.3 -4.80178 | opp_overlap 1547502 1547507 1547521, overlap 1547502 TATGAACCAATAAAA TCCCCCT CGTGATTC AGGGGGA TTTCACTCTGTTTTC TERM 2431 1547507 - 1547528 + F 70 -7.3 -3.80569 | opp_overlap 1547507 1547502, overlap 1547502 1547521 TATGAACCAATAAAA TCCCCCT CGTGATTC AGGGGGA TTTCACTCTGTTTTC TERM 2432 1548426 - 1548415 - g 71 -3 -5.07971 | CAAAAGAAGCAAAAA TTGA AGAA TCAA GAGACCGCATTCAAG TERM 2433 1549736 - 1549717 - g 70 -2.8 -4.98352 | overlap 1549721 AGGAAACAAAAGAAA CGAAGCAA TTAA TTGCTGCA AATGAAAGCCAATTA smc 1547610 - 1551170 + | chromosome segregation protein Smc TERM 2434 1551235 - 1551223 - g 80 -2.7 -5.56372 | AAATTAAAAGAAAAA TTTAC ACA GCAAA CCGATTCAGTATCAG TERM 2435 1551646 - 1551630 - g 75 -5.1 -4.88295 | opp_overlap 1551630 AAATAAATTGAAAAA TGAAGGA AAA TCCGTCA TTTTGGCAGCAGGTG ftsY 1551193 - 1552179 + | signal recognition particle-docking protein TERM 2436 1552216 - 1552176 - f 79 -9.9 -3.44998 | opp_overlap 1552186, overlap 1552177 1552186 CATTGATCAAGAAGA CTAACAAAAATGCCGGCAA AAA TTGCTGGCATTTTTATTTA TACGCCGCTTTATGA TERM 2437 1552215 - 1552177 - f 78 -11.2 -2.66517 | opp_overlap 1552186, overlap 1552176 1552186 ATTGATCAAGAAGAC TAACAAAAATGCCGGCAA AAA TTGCTGGCATTTTTATTT ATACGCCGCTTTATG TERM 2438 1552186 - 1552206 + F 100 -11.9 -5.38054 | opp_overlap 1552177 1552176 1552186 GAAGACTAACAAAAA TGCCGGCAA AAA TTGCTGGCA TTTTTATTTATACGC TERM 2439 1552206 - 1552186 - f 100 -9.7 -5.19251 | opp_overlap 1552186, overlap 1552177 1552176 GAAGACTAACAAAAA TGCCGGCAA AAA TTGCTGGCA TTTTTATTTATACGC ylxM 1552322 - 1552654 + | hypothetical protein TERM 2440 1552959 - 1552948 - g 73 -5.8 -4.44819 | GAGAAGAGAGTAAAA TCGC TGTA GCGA AAAAATCTCCGACGG TERM 2441 1553072 - 1553052 - g 74 -4 -5.02074 | TTACTTCGCAAAAAA CATAATCG TAAAC CGATGATG GTGGCTGCAGATATT TERM 2442 1553775 - 1553762 - g 71 -4.5 -4.58283 | GAAGGGGCTCAAAAA CGTCC AAGT AGACG AAAAGCAGCTCAATC ffh 1552668 - 1554008 + | signal recognition particle protein Ffh rpsP 1554114 - 1554386 + | 30S ribosomal protein S16 BPUM_1498 1554386 - 1554631 + | RNA binding protein TERM 2443 1554657 - 1554635 - f 74 -5.5 -4.7254 | gap 1, opp_overlap 1554636, overlap 1554636 ATTGCTGACTAAAAA GGGAGAGGGC TTAG GACCTC-CCC TTTTTTTACACGTTT TERM 2444 1554636 - 1554657 + F 83 -5.7 -5.4477 | opp_overlap 1554635 1554636 TTGCTGACTAAAAAG GGAGAGGGC TTAG GACCTCCCC TTTTTTTACACGTTT BPUM_1499 1554735 - 1555121 + | hypothetical protein rimM 1555130 - 1555654 + | 16S rRNA processing protein trmD 1555651 - 1556385 + | tRNA (guanine-N(1)-)-methyltransferase rplS 1556523 - 1556870 + | 50S ribosomal protein L19 TERM 2445 1556886 - 1556909 + F 100 -10.4 -5.626 | opp_overlap 1556886 TGATATCAAAAGAAA GAGCTTGTTA CCTG TAACAGGCTC TTTTTTTGTACAATG TERM 2446 1556909 - 1556886 - f 87 -8.2 -4.75288 | opp_overlap 1556886 TGATATCAAAAGAAA GAGCTTGTTA CCTG TAACAGGCTC TTTTTTTGTACAATG ylqF 1556959 - 1557807 + | ribosomal biogenesis GTPase TERM 2447 1557805 - 1557833 + F 93 -10.4 -5.00616 | opp_overlap 1557804 1557809, overlap 1557809 GAGAAGCCTGAAAGC TAAAGACACGCA GCTCA TGCGGGTCTTTA TTTTTTGCGGAAAAC TERM 2448 1557809 - 1557829 + F 83 -6.8 -5.04249 | opp_overlap 1557804 1557809, overlap 1557805 AGCCTGAAAGCTAAA GACACGCA GCTCA TGCGGGTC TTTATTTTTTGCGGA rnhB 1557883 - 1558647 + | ribonuclease HII BPUM_1505 1558675 - 1560411 + | hypothetical protein ylqH 1560408 - 1560683 + | flagellar biosynthesis protein FlhB sucC 1560860 - 1562020 + | succinyl-CoA synthetase subunit beta sucD 1562043 - 1562945 + | succinyl-CoA synthetase subunit alpha TERM 2449 1562979 - 1562954 - f 81 -10.6 -3.61404 | opp_overlap 1562954, overlap 1562957 GCATTAATGACACAA GAAGACTTGT TCTTTG ACAAGTCTTC TTCTTTCTATCTTAA TERM 2450 1562954 - 1562979 + F 88 -11.3 -4.21954 | opp_overlap 1562954 1562957 GCATTAATGACACAA GAAGACTTGTT CTTT GACAAGTCTTC TTCTTTCTATCTTAA TERM 2451 1563728 - 1563716 - g 75 -5.5 -4.88918 | opp_overlap 1563716 TCAGTGCAAAGAAAA GAGCG GTT CACTC ATTACTGCCTATCAA TERM 2452 1563780 - 1563796 + G 70 -9.5 -2.83271 | overlap 1563777 GTATTTGCCGTTGCA GGATCAA TCT TTGATCC TAATTCTACAGGTCC smf 1563009 - 1563911 + | Smf family DNA processing protein TERM 2453 1564348 - 1564310 - g 82 -6 -5.07971 | TAAAAGAATTAAAAA CAGCTGCGAAAAAAGC AAAGAAA GTCTATCTCGCAGCTG ACCCCGATAGAGAGG topA 1564105 - 1566180 + | DNA topoisomerase I TERM 2454 1566180 - 1566204 + F 82 -5 -5.39721 | gap 1, overlap 1566182 GGAACAACAAAAATA GC-GGTGGGCA ACCT TGTTCACCTGC TTTTTTATGTCATCA gidA1 1566251 - 1567555 + | tRNA (uracil-5-)-methyltransferase Gid TERM 2455 1567849 - 1567863 + G 73 -5.6 -4.52803 | overlap 1567850 ATTAGTAAGAAAGTC TCTGCG CTT CGCAGC TTTTATAAATTTCTA TERM 2456 1567850 - 1567862 + G 71 -9.1 -3.30597 | overlap 1567849 TTAGTAAGAAAGTCT CTGCG CTT CGCAG CTTTTATAAATTTCT xerC 1567618 - 1568535 + | site-specific tyrosine recombinase XerC clpQ 1568550 - 1569095 + | ATP-dependent protease peptidase subunit TERM 2457 1569523 - 1569493 - g 100 -8.5 -5.03945 | opp_overlap 1569493 GAAGAAGCAGAAAAA CAAGCAAATAAAC GTCTT GTTCATTTACTTG TTCCTGGCAAGAAAA clpY 1569112 - 1570512 + | ATP-dependent protease ATP-binding subunit codY 1570547 - 1571326 + | transcriptional repressor CodY TERM 2458 1571328 - 1571371 + F 100 -18.5 -3.85698 | opp_overlap 1571328 1571333, overlap 1571333 TAAAATCTCATTAAA CAAAACCCCTTTTCAGC AGAAATACAA GCTGAAAAGGGGTTTTG TTTATAAAAAAAGAG TERM 2459 1571371 - 1571328 - f 100 -18.5 -3.79021 | opp_overlap 1571328 1571333, overlap 1571333 TAAAATCTCATTAAA CAAAACCCCTTTTCAGC AGAAATACAA GCTGAAAAGGGGTTTTG TTTATAAAAAAAGAG TERM 2460 1571366 - 1571333 - f 100 -12.6 -4.93877 | opp_overlap 1571328 1571333, overlap 1571328 TCTCATTAAACAAAA CCCCTTTTCAGC AGAAATACAA GCTGAAAAGGGG TTTTGTTTATAAAAA TERM 2461 1571333 - 1571366 + F 100 -12.6 -4.99043 | opp_overlap 1571333 1571328, overlap 1571328 TCTCATTAAACAAAA CCCCTTTTCAGC AGAAATACAA GCTGAAAAGGGG TTTTGTTTATAAAAA TERM 2462 1571468 - 1571493 + F 93 -4.1 -5.83822 | overlap 1571460 1571469 AGGTCTTTATACCTA TTCGTAAAATA GATA TATATTACGAG TTTTTTTTACATATA flgB 1571613 - 1572002 + | flagellar basal body rod protein FlgB flgC 1572002 - 1572454 + | flagellar basal body rod protein FlgC TERM 2463 1572716 - 1572700 - g 93 -8.7 -4.56775 | ATTGCCTCGCAAAAA GCGAGTG TGA CACTCAC AGCTGCAACGGAGTT fliE 1572466 - 1572783 + | flagellar hook-basal body protein FliE fliF 1572833 - 1574425 + | flagellar MS-ring protein TERM 2464 1574619 - 1574608 - g 74 -4.4 -5.04385 | GATACTGCTAAAAAA GATG AAAT CATC GAAGAGTTTCACAGC fliG 1574437 - 1575453 + | flagellar motor switch protein G TERM 2465 1575678 - 1575664 - g 78 -10 -3.51976 | opp_overlap 1575664, overlap 1575653 1575660 AATGGCTGAAATCAA TCAGCG CCG CGCTGA TTTTGAAGAAGAAAG TERM 2466 1575664 - 1575678 + G 86 -10 -4.07568 | opp_overlap 1575653 1575664 1575660 AATGGCTGAAATCAA TCAGCG CCG CGCTGA TTTTGAAGAAGAAAG fliH 1575446 - 1576210 + | flagellar assembly protein H fliI 1576207 - 1577523 + | flagellum-specific ATP synthase TERM 2467 1577953 - 1577932 - g 75 -5.9 -4.62772 | opp_overlap 1577931 1577928 1577927 1577932, overlap 1577928 TTGAAATGAAAGAAA TGGATGATA TCTC TATCAGCCA ATTCATGTTTCAAGG fliJ 1577520 - 1577975 + | flagellar biosynthesis chaperone TERM 2468 1578606 - 1578591 - g 70 -2.6 -4.96773 | overlap 1578601 1578603 CTAAGCAAAAATAAA CTAACA GACA TATTAG CAAAACTAACACCTC ylxF 1577988 - 1578686 + | hypothetical protein TERM 2469 1579017 - 1579006 - g 74 -4.4 -5.00884 | opp_overlap 1579006 AGTTGTTTCAAAAAA TGGA ATCC TCCA TTTACGGTGAACAAG fliK 1578687 - 1580018 + | flagellar hook-length control protein flgD 1580018 - 1580464 + | flagellar basal body rod modification protein TERM 2470 1580468 - 1580457 - f 79 -4.4 -5.252 | CAGTTGGAGAAAAAA CGAA GTAA TTCG AGGAGGAAAATAAAT flgG 1580482 - 1581273 + | flagellar basal body rod protein FlgG TERM 2471 1581453 - 1581439 - g 71 -4.3 -4.90778 | overlap 1581434 CGTAGTGAAAGAAAA TGAAG ATCAG CTTCA AGAGAAAATCATTTC BPUM_1528 1581311 - 1581526 + | hypothetical protein fliL 1581523 - 1581951 + | flagellar basal body-associated protein FliL fliM 1581984 - 1582982 + | flagellar motor switch protein FliM TERM 2472 1583168 - 1583155 - g 73 -3.8 -5.01811 | CTATTAAATCAAAAA GTGG AGATTA CCAC CCCAACTGTTACAGT fliY 1582972 - 1584096 + | flagellar motor switch protein cheY 1584124 - 1584486 + | response regulator CheY TERM 2473 1584687 - 1584714 + G 76 -10.7 -2.62718 | opp_overlap 1584694, overlap 1584691 1584691 CAATCAAACGAATCC GGCAGAAGAAG TTCCCT CTTCTTCTGTC TCCATTATGGATTTT fliZ 1584505 - 1585164 + | flagella biosynthesis protein FliZ fliP 1585157 - 1585822 + | flagellar biosynthesis protein FliP fliQ 1585839 - 1586108 + | flagellar biosynthesis protein FliQ fliR 1586115 - 1586894 + | flagellar biosynthesis protein FliR TERM 2474 1587087 - 1587099 + G 71 -3.3 -5.06414 | opp_overlap 1587074 1587098, overlap 1587076 AAGAGCGTATTATTG CGCTC ATT GAACG TTTTTATTCAACAAC TERM 2475 1587629 - 1587611 - g 79 -3 -5.32882 | overlap 1587614 GATGAGTATAAAAAA TCAGAGGG TGA CCCGCTCA TAAAATCAAAGATTA flhB 1586891 - 1587979 + | flagellar biosynthesis protein FlhB flhA 1588009 - 1590042 + | flagellar biosynthesis protein FlhA flhF 1590042 - 1591157 + | flagellar biosynthesis regulator FlhF ylxH 1591154 - 1592059 + | ATPase cheB 1592056 - 1593129 + | chemotaxis-specific methylesterase cheA 1593135 - 1595165 + | sensor histidine kinase CheA cheW 1595190 - 1595651 + | chemotaxis protein CheW cheC 1595664 - 1596290 + | chemotaxis protein CheC cheD 1596290 - 1596790 + | chemoreceptor glutamine deamidase CheD sigD 1596815 - 1597582 + | RNA polymerase sigma factor SigD ylxL 1597604 - 1598143 + | hypothetical protein TERM 2476 1598519 - 1598496 - f 71 -4.6 -4.7497 | overlap 1598497 CTGACGGAGGAAAAA TCCTTTTCGT TGGT ACGAAAAAGC AAGCACAAGATTCAG TERM 2477 1598518 - 1598497 - f 71 -8.1 -3.445 | overlap 1598496 TGACGGAGGAAAAAT CCTTTTCGT TGGT ACGAAAAAG CAAGCACAAGATTCA TERM 2478 1599043 - 1599072 + F 100 -11.6 -5.44721 | opp_overlap 1599043 GTAACCTATTCAAAA GGTGATAAGAGG GAAATG CCTTTTATCACC TTTTTTTCACCTAGT TERM 2479 1599072 - 1599043 - f 85 -9.4 -4.21275 | opp_overlap 1599043 GTAACCTATTCAAAA GGTGATAAGAGG GAAATG CCTTTTATCACC TTTTTTTCACCTAGT tsf 1599124 - 1600005 + | elongation factor Ts TERM 2480 1600016 - 1600027 + F 71 -3.6 -5.00616 | AATAATGTTTGAAAA GCTC TCTG GGGC TTTTTTAGGGAGCAC TERM 2481 1600033 - 1600059 + F 100 -11.7 -5.02476 | TCTCTGGGGCTTTTT TAGGGAGCACA AGCAC TGTGTTCCCTA TTTTTTAGAGGATAT TERM 2482 1600648 - 1600632 - g 95 -9.5 -4.42235 | overlap 1600629 AATGGCGAAAAATAA TGTAGAC GGT GTCTACA GTGCTGATCCTCGTA pyrH 1600210 - 1600863 + | UMP kinase frr 1600865 - 1601422 + | peptide chain release factor RF4 TERM 2483 1601709 - 1601696 - g 73 -3.8 -5.02476 | AGATGGGCGAAAAAA CGTG CTCTTC CACG GGTAGCAGGACATCA TERM 2484 1602098 - 1602129 + G 74 -8 -4.00042 | opp_overlap 1602101 1602106, overlap 1602106 GAAGGTAAGCTTCAA GCAGAAGACATCAC AGAA GAGATGTTTTCAGC TTATTTAATGACAGA uppS 1601552 - 1602334 + | di-trans,poly-cis-decaprenylcistransferase cdsA 1602443 - 1603141 + | phosphatidate cytidylyltransferase dxr 1603180 - 1604331 + | 1-deoxy-D-xylulose 5-phosphate reductoisomerase TERM 2485 1604642 - 1604630 - g 82 -4.9 -5.38249 | ATGAAGTAGAAAAAA TCATT TTA AATGA TAAAGAAAAATATCC TERM 2486 1605208 - 1605171 - g 71 -4.9 -4.65168 | gap 1, opp_overlap 1605176 1605189 AGCAGACGGGAAAAA CATTGGCCGTT-TCGGAT CTT ATCCGCCAACGGAAAATG GATTTCTGAAGGTTA yluC 1604338 - 1605603 + | M50 family peptidase TERM 2487 1605613 - 1605641 + F 100 -12.6 -4.83615 | opp_overlap 1605607 TTATAAAACCAATGT CTCTTGTTTCTC ATTAC GGGAAACAAGAG TTTTTGTGAGAAGTC TERM 2488 1605775 - 1605747 - g 75 -5.9 -4.66163 | opp_overlap 1605750, overlap 1605748 1605751 ATGCTGAGGCAAAAA GTCACCAGCTCTT AGT AAGAGCTGGGTTC ATAAGACAAAATACA TERM 2489 1605750 - 1605772 + G 77 -10.6 -3.14211 | opp_overlap 1605748 1605747 1605751 CTGAGGCAAAAAGTC ACCAGCTCTT AGT AAGAGCTGGG TTCATAAGACAAAAT TERM 2490 1605771 - 1605751 - g 95 -14.1 -2.85361 | opp_overlap 1605750, overlap 1605748 1605747 TGAGGCAAAAAGTCA CCAGCTCTT AGT AAGAGCTGG GTTCATAAGACAAAA TERM 2491 1607337 - 1607321 - g 70 -5.1 -4.42788 | GTGAAGTTTAGAAAA TCAGGTG AAT CACATGA AGTATCTGTTGATGA proS1 1605683 - 1607380 + | prolyl-tRNA synthetase TERM 2492 1607430 - 1607397 - f 93 -4.6 -5.9003 | opp_overlap 1607401, overlap 1607401 AAACGAACAAAAAAA TGAAGGTACCTCCT ATAGAA AAGAGGTACCTTTC TGATTGACAAAAGGA TERM 2493 1607401 - 1607426 + F 75 -7.6 -4.05446 | opp_overlap 1607397 1607401 GAACAAAAAAATGAA GGTACCTCCT ATAGAA AAGAGGTACC TTTCTGATTGACAAA TERM 2494 1607426 - 1607401 - f 85 -9.8 -4.12421 | opp_overlap 1607401, overlap 1607397 GAACAAAAAAATGAA GGTACCTCCT ATAGAA AAGAGGTACC TTTCTGATTGACAAA TERM 2495 1607730 - 1607716 - g 72 -10 -2.79188 | opp_overlap 1607718, overlap 1607713 GATTGAAGTCAATGA TCCGAG CAT CTCGGA AGAGCTCGTTCAATC TERM 2496 1611305 - 1611317 + G 82 -7.7 -4.50976 | ATTGCTTACTTTAAG GTGCA TCA TGCAC TTTTATACTATGCGG polC 1607456 - 1611769 + | DNA polymerase III PolC TERM 2497 1611783 - 1611804 + F 93 -10.1 -5.03994 | opp_overlap 1611783 AATACGATCAATGCA GAGCGCCCT TAAT GGGGCGTTC TTTTTATATATACAA TERM 2498 1612660 - 1612644 - g 71 -9.4 -2.94293 | opp_overlap 1612641 1612657, overlap 1612641 CCTGGAACAGAAGTA GCCGCA CAAAC TGCGGC AGCTTTAGCAGCGGG bglC 1612188 - 1614038 + | cellulase TERM 2499 1615857 - 1615877 + G 71 -9.1 -3.35775 | overlap 1615855 AGAGAGGACTATGAC CGCTTCTTT AAA AAAGAAGTG TATTTCCCAAATGGT celB 1614069 - 1616174 + | cellulose 1,4-beta-cellobiosidase TERM 2500 1616190 - 1616213 + F 90 -11 -4.42062 | opp_overlap 1616189 CAGATCAAATTTAAG CTGCCGGTTT CTTT GAGCCGGCAG TTTGTTTAAGAAATA TERM 2501 1616891 - 1616881 - g 93 -4 -5.77856 | AAGAAACGAAAAAAA TTGA CCC TCAA GCACAATTGTTTGTA TERM 2502 1617419 - 1617405 - g 100 -8.6 -4.96996 | GGTAAAGAAAATAAA CTGTTG AAA CAACAG ACAATTGAACTTGAT BPUM_1560 1616259 - 1617488 + | glycoside hydrolase TERM 2503 1617879 - 1617908 + G 76 -9.3 -3.54543 | opp_overlap 1617877 GAAGGAATAAAGCTT GTCATCCCACTAG TGAA CAATTGGGATGAC TTTGGCGGAATGAAT BPUM_1561 1617507 - 1618640 + | mannan endo-1,4-beta-mannosidase TERM 2504 1618730 - 1618747 + F 86 -9.1 -4.66537 | opp_overlap 1618730 CGATTACCGAGACAA GAGTGGG GAAA CCCGCTC TTTTGTATTGAACAG TERM 2505 1618803 - 1618823 + F 87 -8.3 -4.83615 | TCCGTTTTCTGCTCC CCCTGCT CACATAA AGCAGGG TTTTTATGCAGAATG TERM 2506 1619193 - 1619178 - g 77 -4.8 -5.03715 | AGCACTTGGAAAAAA TGTTTT CATG AAAACA TATGAACCAATTGAT ylxS 1618879 - 1619352 + | hypothetical protein nusA 1619385 - 1620500 + | transcription elongation factor NusA ylxR 1620507 - 1620806 + | hypothetical protein ylxQ 1620793 - 1621095 + | hypothetical protein TERM 2507 1621511 - 1621494 - g 82 -5.7 -5.00884 | AGCTTCCTGAAAAAA TTGAATT TACT AATTCAA TGACAGTCGGACAGC infB 1621115 - 1623235 + | translation initiation factor IF-2 BPUM_1567 1623232 - 1623510 + | hypothetical protein rbfA 1623528 - 1623878 + | ribosome-binding factor A TERM 2508 1623881 - 1623924 + F 100 -13.4 -3.53012 | gap 1, opp_overlap 1623881 1623879 1623892, overlap 1623892 AGATCACGAATAAGA CGTTGAAATAAGGATAGGCGA TGA TCGTCTGTCCTT-TTTCATCG TTTACGAAAGGAGAG TERM 2509 1623924 - 1623881 - f 74 -9 -3.46144 | gap 1, opp_overlap 1623881 1623892, overlap 1623879 1623892 AGATCACGAATAAGA CGTTGAAATAAGGATAGGCGA TGA TCGTCTGTCCTT-TTTCATCG TTTACGAAAGGAGAG TERM 2510 1623892 - 1623914 + F 91 -10.6 -4.84363 | opp_overlap 1623892 1623881 1623879, overlap 1623881 AAGACGTTGAAATAA GGATAGGCGA TGA TCGTCTGTCC TTTTTCATCGTTTAC TERM 2511 1623993 - 1623981 - g 71 -4.8 -4.64048 | TATTACATAAAGAAA GAGG GATGA CCTC TCACGACTGTGTGTT truB 1623947 - 1624876 + | tRNA pseudouridine 55 synthase TERM 2512 1625151 - 1625139 - g 74 -6.3 -4.46212 | CGCTTGAGGATAAAA TCGAT TTC ATCGA ACAGCTGGGCGCTGA ribC 1624895 - 1625860 + | bifunctional riboflavin kinase/FMN adenylyltransferase rpsO 1626001 - 1626270 + | 30S ribosomal protein S15 TERM 2513 1626280 - 1626295 + F 100 -10.4 -5.34555 | opp_overlap 1626280 CGATAATCGTAAAAA GCGGGA GGAT TCCCGC TTTTTTATCGTATAA TERM 2514 1626295 - 1626280 - f 89 -10.4 -4.6902 | opp_overlap 1626280 CGATAATCGTAAAAA GCGGGA GGAT TCCCGC TTTTTTATCGTATAA pnpA 1626451 - 1628568 + | polynucleotide phosphorylase/polyadenylase TERM 2515 1628581 - 1628606 + F 100 -11.9 -4.87892 | opp_overlap 1628581 1628584 TAATGAAATATATGA GAAGCCAGGTA TCCG TACCAGGCTTC TTTCTTTTCTTGCGC TERM 2516 1628606 - 1628581 - f 86 -11.9 -2.8335 | opp_overlap 1628581, overlap 1628584 TAATGAAATATATGA GAAGCCAGGTA TCCG TACCAGGCTTC TTTCTTTTCTTGCGC TERM 2517 1628603 - 1628584 - f 70 -7.8 -3.54662 | opp_overlap 1628581, overlap 1628581 TGAAATATATGAGAA GCCAGGTA TCCG TACCAGGC TTCTTTCTTTTCTTG TERM 2518 1629203 - 1629191 - g 82 -3.3 -5.41746 | overlap 1629192 AATGGGTGAAAAAAA GCACG GAT CTTGC TAAAAAGATCGTGGC ylxY 1628683 - 1629636 + | polysaccharide deacetylase TERM 2519 1630670 - 1630657 - g 71 -3.1 -5.04175 | GGAATCACACAAAAA GAGCT TGAA AACTC TAAGGAGCAAATGAA mlpA 1629670 - 1630899 + | M16B subfamily peptidase TERM 2520 1630911 - 1630936 + F 100 -13.3 -4.42974 | opp_overlap 1630911 1630909 ATAATGTAAACAACA CGGCAGGCTTC TTAA GAGGTCTGCCG TTTATTGTATATCAA TERM 2521 1630936 - 1630911 - f 74 -8.9 -3.59975 | opp_overlap 1630911, overlap 1630909 ATAATGTAAACAACA CGGCAGGCTTC TTAA GAGGTCTGCCG TTTATTGTATATCAA aph 1630973 - 1631896 + | kanamycin kinase ymxH 1631967 - 1632239 + | hypothetical protein TERM 2522 1632225 - 1632249 + F 100 -10.8 -5.58522 | opp_overlap 1632225 CCGCCCGGGGAAAAA GAGCATCCAT CATAA ATGGGTGCTC TTTTTCTTTTCTCTC TERM 2523 1632249 - 1632225 - f 88 -9.3 -4.56597 | opp_overlap 1632225 CCGCCCGGGGAAAAA GAGCATCCATC ATA AATGGGTGCTC TTTTTCTTTTCTCTC TERM 2524 1633167 - 1633131 - g 74 -5 -4.83615 | overlap 1633134 GACTTTGCACAAAAA CACGGAGTGAAGGCGC TTCTT GCACCTGGACTCCCCG GAATTGTTGCACCAA spoVFA 1632363 - 1633265 + | dipicolinate synthase subunit A TERM 2525 1633770 - 1633754 - g 73 -3.6 -5.0133 | opp_overlap 1633760, overlap 1633741 1633755 GATCCGTTTAAAAAA CCGACC TCCAT GGTCGC AAACATGGATCTGCT spoVFB 1633262 - 1633855 + | dipicolinate synthase subunit B asd 1633995 - 1635014 + | aspartate-semialdehyde dehydrogenase TERM 2526 1635076 - 1635039 - f 78 -10 -3.23692 | gap 1, opp_overlap 1635039 1635041 1635044, overlap 1635044 GATGATGAGGACGAA CAGAAGAGAGTTAGGCA TCTTT CGCCTG-CTCTCTTCTG TTACGTCAGAATGAA TERM 2527 1635039 - 1635076 + F 83 -11.5 -3.06183 | gap 1, opp_overlap 1635039 1635044, overlap 1635041 1635044 GATGATGAGGACGAA CAGAAGAGAGTTAGGC ATCTTTC GCCTG-CTCTCTTCTG TTACGTCAGAATGAA dapG 1635107 - 1636321 + | aspartate kinase I dapA2 1636352 - 1637218 + | dihydrodipicolinate synthase TERM 2528 1637241 - 1637272 + F 100 -13.1 -5.28176 | AAAAGATTTCGTAAG CGGTCATTCTCAG ATGTCC CTGAGTATGACCG TTTTTTATACATAAA TERM 2529 1638494 - 1638473 - g 71 -4.4 -4.83169 | opp_overlap 1638463 ATTTTTGCACAAAAA CGTGTGCA TGTTTC TGGACACG GGTGCCAAGAGGAGT TERM 2530 1638700 - 1638681 - g 72 -9.4 -3.12005 | GACAGAACGTCAAGA TTGGTGAA AAAG TTCACCAA GGCAATATTTTGATC BPUM_1582 1637390 - 1639057 + | metallo beta lactamase TERM 2531 1639070 - 1639095 + F 100 -15.5 -5.23316 | opp_overlap 1639070 TGATGTGATGAAAAA GCCCAAGGAGC ATAA GCTCTTTGGGC TTTTTTGATGTGGTG TERM 2532 1639095 - 1639070 - f 100 -13.3 -4.7373 | opp_overlap 1639070 TGATGTGATGAAAAA GCCCAAGGAGC ATAA GCTCTTTGGGC TTTTTTGATGTGGTG clpP1 1639161 - 1639910 + | endopeptidase ClpP BPUM_1584 1639907 - 1640143 + | hypothetical protein TERM 2533 1640181 - 1640199 + F 79 -7.4 -4.61852 | opp_overlap 1640180 1640181 AACTTACAACAAGAT GCAGCC AAAACCA GGCTGC TTTCTTTCTGATCTT TERM 2534 1640310 - 1640299 - g 71 -2.2 -5.1285 | AAAAAACAAAATAAA CAGC TAAA ACTG AAATATGAATTAAAT TERM 2535 1640496 - 1640482 - g 89 -7.2 -5.00884 | ATCTTCTGGAAAAAA CAAATC CCA GATTTG TTGACAAGGAGAAAG TERM 2536 1640533 - 1640545 + G 73 -5.5 -4.5954 | overlap 1640521 TTATACTGCATCATT GCGAG TAT CTTGC TTTTGTCTCATGTGA spoIIIE 1640254 - 1642626 + | stage III sporulation DNA translocase E TERM 2537 1642614 - 1642638 + F 100 -13 -3.89822 | opp_overlap 1642606 1642611 1642609 1642608 AGAACAATATGACGA GCTCTCTTCA TAAAT TGAAGAGAGC TTTCTAAAATGAGTA ymfC 1642792 - 1643517 + | GntR family transcriptional regulator TERM 2538 1643521 - 1643544 + F 100 -9.6 -5.27938 | opp_overlap 1643521 AAACGATTTTAACGA GCAGTCGCTT TCAT AAGCGGTTGC TTTTTGTTTGCCCAT TERM 2539 1644274 - 1644286 + F 70 -4.8 -4.66833 | AAGCATGAGGGACGC TGGC TGTAT GCCA TTTTTGCCATTGGCG TERM 2540 1644861 - 1644877 + F 100 -2.9 -6.07374 | opp_overlap 1644852 1644861, overlap 1644847 1644864 TTAATATAGAAAAAA GACGGTA TTT TGCCATC TTTTTTCTTTTTTAT TERM 2541 1644877 - 1644861 - f 76 -2.9 -5.47431 | opp_overlap 1644861 1644847 1644864, overlap 1644852 TTAATATAGAAAAAA GACGGTA TTT TGCCATC TTTTTTCTTTTTTAT TERM 2542 1645534 - 1645515 - g 82 -8 -4.46215 | GACATTCAAAAACAA CTTTTATC AAAG GATAAAAG TACACTTCTTGTTCC TERM 2543 1647945 - 1647956 + G 75 -5.8 -4.72486 | TACGATGGTCTCAGC TGGG CTGT CCCA TTTTTCAGCTTTGTC BPUM_1587 1645167 - 1648283 + | resistance-nodulation-cell division acriflavin:proton (H+) antiporter TERM 2544 1648291 - 1648313 + F 100 -14.2 -5.35815 | opp_overlap 1648287 TGAAATAACGACCAG CGTCTCTGCT TAT AGCAGAGGCG TTTTTATTTCCTATC TERM 2545 1648524 - 1648498 - g 75 -2.4 -5.28983 | GTCAAAACAGAAAAA TTTAAAACGG TCACAAT CCTTTTTAAA ATGCTCGCGCCTCTA TERM 2546 1649336 - 1649326 - g 70 -5.4 -4.57341 | opp_overlap 1649326 1649335 AATGTTCGGGAAAAA GCAA GTC TTGC GTATTATGCTGTGTC BPUM_1588 1648429 - 1649709 + | M16 family metallopeptidase BPUM_1589 1649706 - 1650998 + | M16C subfamily metallopeptidase TERM 2547 1651007 - 1651033 + F 91 -7.4 -5.43414 | opp_overlap 1651007 1651009 AAAATAATGAAAAAA GGCAAACTCA GATTTAA TGAGTTTGTC TTTTTTATGTCTAAT TERM 2548 1651033 - 1651007 - f 82 -5.2 -5.43514 | opp_overlap 1651007, overlap 1651009 AAAATAATGAAAAAA GGCAAACTCA GATTTAA TGAGTTTGTC TTTTTTATGTCTAAT BPUM_1590 1651149 - 1651625 + | MarR family transcriptional regulator TERM 2549 1653255 - 1653243 - g 82 -3.3 -5.50723 | CGATCAAAACAAAAA CGGTG TTG CACAG ATTAAAGAAAAAATT ydgH 1651603 - 1654722 + | resistance-nodulation-cell division acriflavin:proton (H+) antiporter TERM 2550 1655220 - 1655230 + G 71 -6.8 -4.17556 | GCATGGTGAAGGGTG CGCA AAA TGCG TTTATTAAAGGTCTG ymfI 1654754 - 1655482 + | 3-ketoacyl-(acyl-carrier-protein) reductase ymfJ 1655556 - 1655813 + | hypothetical protein TERM 2551 1655821 - 1655841 + F 76 -2.5 -5.48213 | overlap 1655815 CGCACTAAAGAAAAA GAGGGGT CGTTTGT GCCTCTC TTTTTATTTTAACTG TERM 2552 1656389 - 1656404 + G 77 -4.6 -5.00895 | GCCTCAAGTGTATGT GCCAGC AAAA GATGGC TTTTTGTATCATCCA BPUM_1594 1655945 - 1656736 + | hypothetical protein TERM 2553 1657304 - 1657288 - g 81 -5.2 -5.15167 | overlap 1657265 1657300 GATGATCAAGAAAAA TCATCT AAAAA AGATGA CTCATCAAAGGATTC TERM 2554 1657310 - 1657300 - g 81 -5.4 -5.13521 | overlap 1657288 AAATCATCTAAAAAA GATG ACT CATC AAAGGATTCATCTAA ymfM 1656751 - 1657671 + | transcription regulation protein TERM 2555 1657690 - 1657656 - f 70 -5.9 -4.21141 | opp_overlap 1657657 1657662, overlap 1657657 1657662 TGTGAATAAAGGAAA GGAAAAGTCATCT TAAGCAAGT AGATGACTTTTCT TTTGTTCCTACTATT TERM 2556 1657657 - 1657689 + F 90 -9.4 -4.74215 | opp_overlap 1657657 1657656 1657662, overlap 1657662 GTGAATAAAGGAAAG GAAAAGTCATCT TAAGCAAGT AGATGACTTTTC TTTTGTTCCTACTAT TERM 2557 1657689 - 1657657 - f 74 -9.4 -3.11962 | opp_overlap 1657657 1657662, overlap 1657656 1657662 GTGAATAAAGGAAAG GAAAAGTCATCT TAAGCAAGT AGATGACTTTTC TTTTGTTCCTACTAT TERM 2558 1657662 - 1657684 + F 75 -3.5 -5.28831 | opp_overlap 1657657 1657656 1657662, overlap 1657657 TAAAGGAAAGGAAAA GTCATCT TAAGCAAGT AGATGAC TTTTCTTTTGTTCCT pgsA 1657747 - 1658328 + | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase cinA 1658345 - 1659595 + | competence damage-inducible protein A TERM 2559 1659714 - 1659669 - f 89 -10 -4.56597 | opp_overlap 1659685, overlap 1659673 CTCTTTTCTTAAAAA TCCACCAAGAAAAAATCGAA TATGTG TTCGTTTTTTTCTTGGCAAA TGACGTAAAACAAGG TERM 2560 1659710 - 1659673 - f 90 -13 -2.83903 | opp_overlap 1659685, overlap 1659669 TTTCTTAAAAATCCA CCAAGAAAAAATCGAA TATGTG TTCGTTTTTTTCTTGG CAAATGACGTAAAAC TERM 2561 1659685 - 1659698 + F 88 -3.1 -5.7946 | opp_overlap 1659673 1659669 CCACCAAGAAAAAAT CGAAT ATGT GTTCG TTTTTTTCTTGGCAA recA 1659772 - 1660812 + | recombination protein A TERM 2562 1660837 - 1660822 - f 84 -9 -4.49756 | opp_overlap 1660822, overlap 1660817 TTTTAAAGACTAAAA GACGCT GAAA AGCGTC TTTTTTTACATTTAC TERM 2563 1660822 - 1660837 + F 100 -9 -5.58209 | opp_overlap 1660817 1660822 TTTTAAAGACTAAAA GACGCT GAAA AGCGTC TTTTTTTACATTTAC TERM 2564 1661242 - 1661215 - g 71 -3.4 -4.93365 | gap 1, overlap 1661217 TTGCAGAAGCAAAAA TATCCGGCGCAAG AAA CATG-GCCGAACA AATTGTTGAGGATGC TERM 2565 1661998 - 1661988 - g 73 -5.4 -4.60924 | GAAATGGTGGAAAAA TCAC GCC GTGA AGTCGATGATTATAT ymdA 1661118 - 1662680 + | phosphodiesterase TERM 2566 1662704 - 1662678 - f 73 -6.5 -4.22652 | opp_overlap 1662678, overlap 1662682 GTAGAGTATGCAAAA TAGAGCGGTGC GCTTA GCGCCGCTTTA TTTTTTGTGTAAATA TERM 2567 1662678 - 1662704 + F 100 -10.9 -5.38047 | opp_overlap 1662678 1662682 GTAGAGTATGCAAAA TAGAGCGGTGC GCTTA GCGCCGCTTTA TTTTTTGTGTAAATA ymdB 1662768 - 1663562 + | hypothetical protein TERM 2568 1663640 - 1663656 + F 70 -5.1 -4.57341 | opp_overlap 1663642, overlap 1663642 1663652 TGAATATAGTAAAAA TGGTAGG TAG CCTGCTA TTTTTGAAAAACATT spoVS 1663764 - 1664024 + | stage V sporulation protein S TERM 2569 1664043 - 1664071 + F 100 -19.1 -5.27938 | TAATTTTATTATTTT CAACCTGCTTACA TCA TGTAAGCAGGTTG TTTTTGTTTACCACT yerP 1664227 - 1667271 + | resistance-nodulation-cell division acriflavin:proton (H+) antiporter TERM 2570 1667280 - 1667307 + F 100 -5.6 -6.06723 | opp_overlap 1667274 ACGGTAAATCAAAAA GCAAATCTTCTT TTCT ACGGGGATTTGC TTTTTTTTTAGAAAA TERM 2571 1667860 - 1667850 - g 73 -5.4 -4.66318 | AGTACCTGAACAAAA TGTG TGG CACA ATCCAGCTCAAATGC tdh 1667446 - 1668510 + | L-threonine 3-dehydrogenase TERM 2572 1669025 - 1669041 + G 71 -8.7 -3.254 | overlap 1669023 TTACCGCGTTCGTCT CATCGTC ACA GACGGTG TGTTCTCAATGGATG kbl 1668507 - 1669688 + | 2-amino-3-ketobutyrate coenzyme A ligase TERM 2573 1669689 - 1669704 + F 100 -9 -5.52384 | overlap 1669701 AACATACTTGATTGA GAGAGC GCAG GCTCTC TTTTTTTAATAAAGA ymcB 1669847 - 1671373 + | tRNA 2-methylthioadenine synthetase ymcA 1671375 - 1671809 + | hypothetical protein TERM 2574 1671835 - 1671810 - f 87 -11.9 -2.96695 | opp_overlap 1671815, overlap 1671815 TGCTCCATTAAATGA GAAAACCCCGC AGAT GCGGGGTTTTT TGTTATATAGAATAT TERM 2575 1671815 - 1671830 + F 100 -11.8 -5.60689 | opp_overlap 1671815 1671810 CATTAAATGAGAAAA CCCCGC AGAT GCGGGG TTTTTTGTTATATAG TERM 2576 1671830 - 1671815 - f 100 -11.8 -4.63172 | opp_overlap 1671815, overlap 1671810 CATTAAATGAGAAAA CCCCGC AGAT GCGGGG TTTTTTGTTATATAG TERM 2577 1671861 - 1671908 + F 79 -9.3 -3.76968 | opp_overlap 1671880, overlap 1671865 1671866 1671905 1671906 AATATATGTAATTTG TATTTTGCTACTGCATCAACA ACAAAA TGTTGATGCAGTAGCCCTGTA TTTCGTAGATACGTT TERM 2578 1671865 - 1671904 + F 89 -12.3 -3.30418 | opp_overlap 1671880, overlap 1671861 1671866 TATGTAATTTGTATT TTGCTACTGCATCAACA ACAAAA TGTTGATGCAGTAGCCC TGTATTTCGTAGATA TERM 2579 1671866 - 1671903 + F 100 -15.8 -2.57769 | opp_overlap 1671880, overlap 1671865 1671861 ATGTAATTTGTATTT TGCTACTGCATCAACA ACAAAA TGTTGATGCAGTAGCC CTGTATTTCGTAGAT TERM 2580 1672377 - 1672354 - g 79 -6.7 -4.62069 | opp_overlap 1672353 TCTCCATCGCAAAAA CCAACCAGC ATCCTA GGTGGTTGG ATCATTAATCATAAT cotE 1672261 - 1672806 + | outer spore coat protein E TERM 2581 1672814 - 1672834 + F 100 -6.8 -5.84432 | AAGAGTAATTCATGA CTAGGGCG CATAT CCCCCTAG TTTTTTTGTGTTCTA TERM 2582 1673005 - 1673016 + G 78 -5.8 -4.87273 | TGCCTTTTTATTTTT TCGC TTAG GCGA TTTTTATGAAATGTT TERM 2583 1674387 - 1674369 - g 86 -6.7 -4.98352 | gap 1, opp_overlap 1674368 ATGAAAGAAAACAAA CGCTC-GC CAAT GCAGAGCG GTATATTACACCTGA TERM 2584 1674940 - 1674925 - g 81 -4 -5.26875 | gap 1 GCTTGAAGCAAAAAA TGCGATG GTG CA-CGCA ACGAAAAACAGCTTG mutS1 1672931 - 1675507 + | DNA mismatch repair protein mutL 1675528 - 1677429 + | DNA mismatch repair protein TERM 2585 1677468 - 1677442 - T 100 -9.5 -5.68438 | opp_overlap 1677448, overlap 1677444 TGATCAAATAAAAAA GACAAAGGGCT AAAAA AGCCCTTTGTT ACAGTCTGAAGCGCT TERM 2586 1677466 - 1677444 - T 100 -12.1 -4.47052 | opp_overlap 1677448, overlap 1677442 ATCAAATAAAAAAGA CAAAGGGCT AAAAA AGCCCTTTG TTACAGTCTGAAGCG TERM 2587 1677448 - 1677462 + T 73 -7.1 -4.19678 | opp_overlap 1677444 1677442 AATAAAAAAGACAAA GGGCT AAAAA AGCCC TTTGTTACAGTCTGA TERM 2588 1677479 - 1677496 + T 100 -7.7 -5.63517 | TTGTTACAGTCTGAA GCGCTCA TATT TGAGTGC TTTTTTATTTAGCAA yuaB 1678038 - 1677505 - | hypothetical protein TERM 2589 1678060 - 1678103 + r 91 -12.9 -3.0814 | opp_overlap 1678065 1678071 ATTCCCCCTTGTTGA TTATAGGTAAATAATAGAT GATTAA ATCCATTATTTACCTATAA TGTTACCATATCCCT TERM 2590 1678098 - 1678065 - R 76 -10.6 -2.78384 | opp_overlap 1678060, overlap 1678071 CCCTTGTTGATTATA GGTAAATAATAGAT GATTAA ATCCATTATTTACC TATAATGTTACCATA BPUM_1611 1678574 - 1678164 - | hypothetical protein TERM 2591 1678657 - 1678642 - R 100 -10.4 -5.58454 | TCCATATCAAAAAAA CCGGCT TTTC AGCCGG GAAAACAAAAAGCAG BPUM_1612 1678867 - 1678682 - | hypothetical protein carD 1679131 - 1679607 + | transcription factor CarD TERM 2592 1679662 - 1679622 - f 77 -8.3 -3.93398 | opp_overlap 1679625 1679656 1679661, overlap 1679625 ATGGATATACAATAA TTAGCTGTAAGCATAAGGG CAT CCCTTTTGTTTACAGCTTT TTTTTGTTTGAAATC TERM 2593 1679659 - 1679625 - f 95 -14.4 -3.02314 | opp_overlap 1679625 1679656, overlap 1679622 GATATACAATAATTA GCTGTAAGCATAAGGG CAT CCCTTTTGTTTACAGC TTTTTTTTGTTTGAA TERM 2594 1679625 - 1679659 + F 100 -16.6 -6.23545 | opp_overlap 1679625 1679622, overlap 1679656 GATATACAATAATTA GCTGTAAGCATAAGGG CAT CCCTTTTGTTTACAGC TTTTTTTTGTTTGAA TERM 2595 1679818 - 1679803 - f 100 -7.6 -5.70829 | opp_overlap 1679803 1679802 1679805 AACAGCATAAAAAAA CAGGAA AGTA TTCCTG ATTCGTTTAAATGAA ymaC 1679919 - 1680668 + | phage-related protein YmaC BPUM_1615 1680834 - 1681982 + | response regulator TERM 2596 1682069 - 1682036 - T 78 -5.3 -5.1383 | opp_overlap 1682040 1682041, overlap 1682039 1682041 AATAACAGACAAAAA CAACACCCTTTACGA ATCA CCGTAAAGGGCTTTT TTTATTTATTCTTTG TERM 2597 1682066 - 1682039 - T 79 -7 -4.62708 | opp_overlap 1682040 1682041, overlap 1682036 1682041 AACAGACAAAAACAA CACCCTTTACGA ATCA CCGTAAAGGGCT TTTTTTATTTATTCT TERM 2598 1682040 - 1682065 + T 100 -7.6 -6.08342 | opp_overlap 1682039 1682036 1682041, overlap 1682041 ACAGACAAAAACAAC ACCCTTTACG AATCAC CGTAAAGGGC TTTTTTTATTTATTC TERM 2599 1682064 - 1682041 - T 90 -11.8 -3.89226 | opp_overlap 1682041 1682040, overlap 1682039 1682036 CAGACAAAAACAACA CCCTTTACGA ATCA CCGTAAAGGG CTTTTTTTATTTATT TERM 2600 1682041 - 1682064 + T 88 -11.1 -4.21345 | opp_overlap 1682039 1682036 1682041, overlap 1682040 CAGACAAAAACAACA CCCTTTACG AATCAC CGTAAAGGG CTTTTTTTATTTATT aprX 1683400 - 1682075 - | protease BPUM_1617 1683986 - 1684720 + | hypothetical protein ymaD 1684798 - 1685247 + | osmotic stress regulator TERM 2601 1685288 - 1685257 - T 100 -7.5 -5.69262 | opp_overlap 1685257 GGATAAAAACAAAAA GTCATTTTCTC TTAATAAATG GAGAAAATGAC TTTTTTTATAACGTC TERM 2602 1685257 - 1685288 + T 100 -8.2 -5.626 | opp_overlap 1685257 GGATAAAAACAAAAA GTCATTTTCTCT TAATAAAT GGAGAAAATGAC TTTTTTTATAACGTC ebrB 1685662 - 1685294 - | DMT superfamily drug/metabolite transporter ebrA 1685993 - 1685676 - | DMT superfamily drug/metabolite transporter BPUM_1621 1686538 - 1685993 - | TetR family transcriptional regulator TERM 2603 1686580 - 1686547 - R 100 -8.3 -6.06529 | opp_overlap 1686549 TAGACATAAAAAAAA CACCTACTTTACTGA ACGG TCGGTAAAGTAAATG TTAACCTATGAAAAA ymaG 1686902 - 1686651 - | spore protein YmaG ymaF 1687007 - 1687408 + | hypothetical protein miaA 1687439 - 1688434 + | tRNA delta(2)-isopentenylpyrophosphate transferase ymaH 1688460 - 1688681 + | RNA-binding protein Hfq ymzC 1688839 - 1689168 + | hypothetical protein ymzA 1689248 - 1689460 + | hypothetical protein TERM 2604 1689601 - 1689617 + F 100 -2.9 -6.02546 | TTCGGCTATGAATGT TCGGCCG GGT TGGTTGA TTTTTTTTCGTTTCG nrdI 1689721 - 1690119 + | ribonucleotide reductase stimulatory protein nrdE 1690079 - 1692181 + | ribonucleotide-diphosphate reductase subunit alpha TERM 2605 1692599 - 1692586 - g 70 -3.9 -4.76802 | GTCAAAAAGAATAAA TTCTT GCAA AAGAA AGCAGATATGATTGT nrdF 1692199 - 1693179 + | ribonucleotide-diphosphate reductase subunit beta TERM 2606 1693184 - 1693225 + F 74 -9.7 -2.84602 | gap 1, opp_overlap 1693184 1693193, overlap 1693193 ATGAATCATAAGTAA GGCGTAAAAGTCAAAACG CATCACT CGTTTTGGCTTTT-TGCC ATTTCATACAATGCG TERM 2607 1693193 - 1693217 + F 79 -6.5 -4.71482 | opp_overlap 1693184 1693193, overlap 1693184 AAGTAAGGCGTAAAA GTCAAAACG CATCACT CGTTTTGGC TTTTTGCCATTTCAT TERM 2608 1693400 - 1693385 - g 82 -7.6 -4.53349 | overlap 1693392 CAATTATGAAAGAAA TCGAAG AGCA CTTCGA GCAGATGCGTAGAGG ymaB 1693264 - 1693881 + | MutT/NUDIX family hydrolase TERM 2609 1693894 - 1693927 + T 86 -11.2 -4.07618 | opp_overlap 1693894 1693898, overlap 1693898 TAAACGAATCAATTA TAAACCGGCTCA TCATCAAACT TGAGCCGGTTTA TTTCGTTATTACAGC TERM 2610 1693927 - 1693894 - T 78 -11.2 -2.88425 | opp_overlap 1693894 1693898, overlap 1693898 TAAACGAATCAATTA TAAACCGGCTCA TCATCAAACT TGAGCCGGTTTA TTTCGTTATTACAGC TERM 2611 1693898 - 1693923 + T 83 -7.6 -4.62392 | opp_overlap 1693898 1693894, overlap 1693894 CGAATCAATTATAAA CCGGCTCA TCATCAAACT TGAGCCGG TTTATTTCGTTATTA TERM 2612 1693923 - 1693898 - T 75 -7.6 -4.10331 | opp_overlap 1693894 1693898, overlap 1693894 CGAATCAATTATAAA CCGGCTCA TCATCAAACT TGAGCCGG TTTATTTCGTTATTA cwlC 1694706 - 1693948 - | N-acetylmuramoyl-L-alanine amidase spoVK 1695027 - 1695986 + | stage V sporulation protein K TERM 2613 1696000 - 1695969 - f 73 -7.4 -4.06502 | gap 1, opp_overlap 1695971, overlap 1695971 GATCTCCAAATGAAA GAGGATACGCCTACT TAA AAT-GGCGTATCCTT TTTGTAAAGAGATAC TERM 2614 1695998 - 1695971 - f 80 -10 -3.62354 | gap 1, opp_overlap 1695971, overlap 1695969 TCTCCAAATGAAAGA GGATACGCCTACT TAA AAT-GGCGTATCC TTTTTGTAAAGAGAT TERM 2615 1695971 - 1695998 + F 87 -8.5 -4.83169 | opp_overlap 1695971 1695969 TCTCCAAATGAAAGA GGATACGCC TACTTAAAAT GGCGTATCC TTTTTGTAAAGAGAT BPUM_1634 1696108 - 1697370 + | HflX family GTP-binding protein TERM 2616 1697649 - 1697634 - g 74 -6.1 -4.46212 | CTTCGGAGGAGAAAA CGGAC TTGTCC GTCCG CAGATCATTTCTGGT TERM 2617 1698616 - 1698606 - g 81 -5.4 -5.1287 | TGCACATGTAAAAAA TGCA ATT TGCA GTGCTGTAGATGCCT ynbB 1697389 - 1698669 + | aluminum resistance protein TERM 2618 1698959 - 1698945 - g 70 -2.8 -5.05505 | ACTAGAAATTAAAAA CCTCAT CGA ACAAGG TGTAAACATGGCAGG glnR 1698760 - 1699170 + | glutamine synthetase transcriptional repressor glnA 1699230 - 1700564 + | glutamate--ammonia ligase TERM 2619 1700605 - 1700569 - f 95 -12.3 -4.2704 | opp_overlap 1700574, overlap 1700574 CTCAGTATTAATAAA CAAAACCCCTTGGAGCC ATT GGCTTCAGGGGGTTTTT GTTTTTGTGGGTGTT TERM 2620 1700574 - 1700600 + F 100 -16.6 -5.69262 | opp_overlap 1700574 1700569 TATTAATAAACAAAA CCCCTTGGAGCC ATT GGCTTCAGGGGG TTTTTGTTTTTGTGG TERM 2621 1700600 - 1700574 - f 100 -12.2 -5.12172 | opp_overlap 1700574, overlap 1700569 TATTAATAAACAAAA CCCCTTGGAGCC ATT GGCTTCAGGGGG TTTTTGTTTTTGTGG BPUM_1638 1701045 - 1701197 + | hypothetical protein BPUM_1639 1701404 - 1702471 + | patatin phospholipase BPUM_1640 1703198 - 1703776 + | hypothetical protein BPUM_1641 1703943 - 1704146 + | hypothetical protein BPUM_1642 1704147 - 1704380 + | hypothetical protein BPUM_1643 1704344 - 1704493 + | hypothetical protein TERM 2622 1705380 - 1705391 + G 70 -5.8 -4.33621 | opp_overlap 1705379 TAGAAGGAATTTAAT GGCA GTGA TGCC TTTATTCGTTGCATA yjcP 1705102 - 1705584 + | hypothetical protein BPUM_1646 1705664 - 1705870 + | hypothetical protein TERM 2623 1705887 - 1705902 + F 89 -6.8 -5.49234 | opp_overlap 1705887, overlap 1705881 CTGAGTTTTCAAAAA GCATCC TGCG GGGTGC TTTTTTGTTCCCTGT TERM 2624 1707820 - 1707831 + G 75 -2.2 -5.31059 | GAACGGAAAATTGAA CTTC TTAA GGAG TTTTTTGATTCGTAT yobJ 1707586 - 1708482 + | membrane protein BPUM_1650 1708517 - 1708795 + | hypothetical protein TERM 2625 1709024 - 1709047 + F 84 -2.4 -5.80817 | opp_overlap 1709024 TGATGACTTTAAAAA GAGCCG TTCATATTAATT CGGCTC TTTTTTTATATTAGC BPUM_1651 1709199 - 1710332 + | aspartate phosphatase response regulator TERM 2626 1710463 - 1710483 + F 81 -3.2 -5.63517 | opp_overlap 1710463 AAATTCCATTAGAAA GAATCCCT TTTCC GGGGCTTC TTTTTTATTTGAACA BPUM_1652 1710723 - 1712648 + | hypothetical protein BPUM_1653 1712654 - 1713136 + | hypothetical protein TERM 2627 1713144 - 1713163 + F 73 -6.4 -4.33582 | overlap 1713141 ACAACTAACACATTG CCCTCC AAATTTAA GGAGGG TTATTTATTGTTGAA TERM 2628 1713280 - 1713264 - f 76 -5.1 -5.08169 | opp_overlap 1713264 1713262, overlap 1713248 1713250 AGAGAGGTTAAAAAA CACCC TCTATTG GGGTG TCTTATTTTTATTGG BPUM_1654 1713310 - 1714032 + | hypothetical protein TERM 2629 1714486 - 1714473 - g 70 -2.5 -5.01732 | AATTCTGGTAAAAAA TATTT AGAA AAATA CCTCTCTACATTGGA BPUM_1655 1714032 - 1714505 + | hypothetical protein TERM 2630 1714560 - 1714594 + T 70 -8.7 -3.09516 | opp_overlap 1714560 1714559, overlap 1714563 GACTAGAGAACATAT TGAGAGCATCATTCC AAGCA GAAATGGTGCTCTTA TTCAATAATGCCCCC TERM 2631 1714563 - 1714591 + T 73 -8.2 -3.69395 | opp_overlap 1714560 1714559, overlap 1714560 TAGAGAACATATTGA GAGCATCATTCC AAGCA GAAATGGTGCTC TTATTCAATAATGCC BPUM_1656 1715219 - 1714770 - | hypothetical protein BPUM_1657 1715432 - 1715974 + | GNAT family acetyltransferase BPUM_1658 1716115 - 1716696 + | phosphatidate phosphatase TERM 2632 1716711 - 1716745 + T 78 -3.5 -5.45802 | opp_overlap 1716712 1716713 1716714, overlap 1716714 ACATGTTGTAATAAA ATGCCCCGATCTG TTTATGGCT CAGATCGGGGTTC TTTTTATTTTCGCCA TERM 2633 1716744 - 1716712 - T 70 -4.8 -4.63932 | opp_overlap 1716711 1716714, overlap 1716713 1716714 CATGTTGTAATAAAA TGCCCCGATCTG TTTATGGCT CAGATCGGGGTT CTTTTTATTTTCGCC TERM 2634 1716743 - 1716713 - T 70 -8.3 -3.37877 | opp_overlap 1716711 1716714, overlap 1716712 1716714 ATGTTGTAATAAAAT GCCCCGATCTG TTTATGGCT CAGATCGGGGT TCTTTTTATTTTCGC TERM 2635 1716742 - 1716714 - T 81 -11.8 -2.62244 | opp_overlap 1716714 1716711, overlap 1716713 1716712 TGTTGTAATAAAATG CCCCGATCTG TTTATGGCT CAGATCGGGG TTCTTTTTATTTTCG TERM 2636 1716714 - 1716742 + T 100 -11.8 -4.80077 | opp_overlap 1716713 1716712 1716714, overlap 1716711 TGTTGTAATAAAATG CCCCGATCTG TTTATGGCT CAGATCGGGG TTCTTTTTATTTTCG ydhG 1717120 - 1716749 - | hypothetical protein TERM 2637 1717589 - 1717565 - g 84 -2.9 -5.72053 | CAATCAAACAAAAAA TGAAAGCTT TACTCAC AAGCGTTCA ATGAGTCCTCCTTTT TERM 2638 1717793 - 1717806 + G 71 -2.4 -5.13354 | opp_overlap 1717793 TCGATCCAGTTCAAA GATC CTTGTT GATC TTTCTTTTTTATGCG BPUM_1660 1717512 - 1718180 + | hypothetical protein BPUM_1661 1718255 - 1718599 + | hypothetical protein BPUM_1662 1718644 - 1719681 + | hypothetical protein TERM 2639 1719704 - 1719691 - f 70 -5.2 -4.61824 | opp_overlap 1719691, overlap 1719686 GAATAAGAACTAAAA GCCC AAAAAA GGGC TTTTTTTTATTTCAT TERM 2640 1719691 - 1719704 + F 100 -5.2 -6.25578 | opp_overlap 1719686 1719691 GAATAAGAACTAAAA GCCC AAAAAA GGGC TTTTTTTTATTTCAT BPUM_1663 1719939 - 1721051 + | aspartate phosphatase response regulator TERM 2641 1721185 - 1721210 + F 100 -10.5 -5.75478 | ACTATGTATCTCTTG CCCTTGTTGAT GATC GTCAGCAAGGG TTTTTTTATGTGGTT BPUM_1664 1721511 - 1721744 + | hypothetical protein TERM 2642 1721761 - 1721793 + T 83 -11.6 -3.16039 | gap 1, opp_overlap 1721767, overlap 1721767 GTTTCATTACAGTGA TTGAAATAGCC-ATC TAAT GATTGGCTATTTCAA TTGATGAAAGTGCTT yoaK 1722480 - 1721785 - | hypothetical protein TERM 2643 1721952 - 1721964 + g 87 -4.8 -5.42198 | GCATGAAACTGACAT GCTC AATGG GAGC TTTTCTTTTTTCCCG ykoU 1724380 - 1722515 - | ATP-dependent DNA ligase TERM 2644 1722613 - 1722628 + g 73 -3.9 -4.98531 | CAAGGTGCCTCATGC GGCGG AATGGA TCGCC TTTTTCCTTTAGACG TERM 2645 1724719 - 1724703 - g 77 -3.7 -5.1101 | CGAGTATGCAAAAAA CAAATTC ATT GAATTAG ACGAGGAAGAGCTTG ykoV 1724497 - 1725345 + | Ku-like DNA end-binding protein TERM 2646 1725368 - 1725351 - T 87 -8.4 -4.80959 | opp_overlap 1725351 GAATGCATAAGAAAA GACCGC TCATGG GCGGTC TTATTGCGGTTTTAA TERM 2647 1725351 - 1725368 + T 76 -9.1 -3.73106 | opp_overlap 1725351 GAATGCATAAGAAAA GACCGCT CATG GGCGGTC TTATTGCGGTTTTAA ydaT 1725812 - 1725369 - | hypothetical protein BPUM_1669 1725976 - 1726446 + | glutathione transferase BPUM_1670 1726495 - 1726908 + | transcriptional regulator TERM 2648 1726912 - 1726927 + F 76 -2.6 -5.4477 | gap 1, opp_overlap 1726899 1726912, overlap 1726899 1726895 GAGGCGGAATAAAAA GCTCGTA CAT TA-GAGC TTTTTTTACACCTTT TERM 2649 1726927 - 1726912 - f 70 -2.6 -5.07486 | gap 1, opp_overlap 1726912 1726899 1726895, overlap 1726899 GAGGCGGAATAAAAA GCTCGTA CAT TA-GAGC TTTTTTTACACCTTT BPUM_1671 1727010 - 1727861 + | nucleoside diphosphate glycosyl epimerase TERM 2650 1727889 - 1727872 - f 76 -5.5 -4.97461 | opp_overlap 1727872, overlap 1727866 AATAAACATCAAAAA CGCCC AATTAAAA GGGCG TTTTTTTGTCCAAAT TERM 2651 1727872 - 1727889 + F 86 -5.5 -5.61596 | opp_overlap 1727872 1727866 AATAAACATCAAAAA CGCCC AATTAAAA GGGCG TTTTTTTGTCCAAAT yvfV 1728028 - 1728744 + | (S)-2-hydroxy-acid oxidase yvfW 1728766 - 1730187 + | iron-sulfur cluster-binding protein BPUM_1674 1730187 - 1730909 + | hypothetical protein TERM 2652 1730910 - 1730928 + F 91 -9.6 -5.14563 | opp_overlap 1730909 1730907 1730910 1730926, overlap 1730921 ATAGATGATGAATAG GGCTTTCG AGA TGAAAGCC TTTTTTCATGCAAAA BPUM_1675 1731056 - 1731964 + | DMT superfamily drug/metabolite transporter TERM 2653 1731972 - 1731956 - T 100 -5.1 -6.25578 | opp_overlap 1731956 1731949 ATGAAACAAAAAAAA TCCGG TTAAATC CCGGA TTTTTTACTCTTTTA TERM 2654 1731956 - 1731972 + T 82 -5.1 -5.36314 | opp_overlap 1731956, overlap 1731949 ATGAAACAAAAAAAA TCCGG TTAAATC CCGGA TTTTTTACTCTTTTA BPUM_1676 1732168 - 1731977 - | hypothetical protein TERM 2655 1732370 - 1732382 + G 70 -7.7 -3.63744 | overlap 1732369 CTTACACGTTATCAG CGGAT CAA ATCCG TCTTTTGACCCAGCC TERM 2656 1732444 - 1732460 + G 73 -5.1 -4.59489 | opp_overlap 1732444 ATTTCAAGCAAACAT GACCACA AAG TCTGGTC TTTATTATTTGAATT BPUM_1677 1732279 - 1734495 + | phosphoprotein phosphatase TERM 2657 1734507 - 1734526 + F 100 -7.2 -5.7946 | opp_overlap 1734505 1734507 ATAGTCTAAAAAGGA GTCTTTTC TAAG GAAAAGGC TTTTTTTGTTGCAAA yrhI 1735497 - 1736075 + | transcriptional regulator TERM 2658 1736637 - 1736609 - g 100 -13.3 -4.99043 | CTTTTATAAAGAAAA TCAGCATCCTTTC ATC GAAAGCATGCTGA ACGGGTTAAACGAAG yrhJ 1736097 - 1739240 + | NADPH--hemoprotein reductase TERM 2659 1739247 - 1739273 + F 82 -10.9 -3.24146 | opp_overlap 1739247 1739253, overlap 1739253 TGGAGCTAACAAGAA GAAAGGCCGCC AATTA GGCGGTTTTTC CTTTTCATTAAGAAA TERM 2660 1739253 - 1739267 + F 91 -8.5 -5.13016 | opp_overlap 1739253 1739247, overlap 1739247 TAACAAGAAGAAAGG CCGCC AATTA GGCGG TTTTTCCTTTTCATT TERM 2661 1739698 - 1739681 - g 72 -6.3 -4.35581 | overlap 1739684 1739697 TCAAAATATTTAAAA GACTCTC AAAC GAAAGTC GTCATTGGAGACGAT mpr 1739432 - 1740343 + | glutamyl endopeptidase TERM 2662 1740359 - 1740384 + F 100 -10.5 -5.36441 | opp_overlap 1740359 AAGCTAGAGGCTAAA GCTTGTTTCCT TCAT AGGGGACAAGC TTTTTTATATGGAAA TERM 2663 1740545 - 1740533 - f 78 -3.4 -5.40072 | TCTGCTTGAAAAAAA TGAG GAGGT CTCA CACTTTTGAAGATGA TERM 2664 1740839 - 1740851 + G 79 -6.9 -4.64861 | overlap 1740840 TTCGACCGAGATGAG TGGCC AAT GGCCG TTTGTTTTGAAGGAG nucB 1740557 - 1740985 + | sporulation-specific nuclease TERM 2665 1740998 - 1741017 + F 89 -6.4 -5.4833 | TAAAACTAAAAGAGA GGCGCCTA TGAG TAGGTGTC TTTTTTGTTCGCTAG yojH 1741124 - 1741972 + | hypothetical protein TERM 2666 1742002 - 1741970 - T 100 -15.1 -3.02461 | opp_overlap 1741976, overlap 1741976 GAATTTTCTCCAATA TAAAAACCAGGCC GATTAAT GGCCTGGTTTTTA TTTAGATAACAGCGT TERM 2667 1741976 - 1741996 + T 100 -10.4 -5.30616 | opp_overlap 1741970 1741976 TCTCCAATATAAAAA CCAGGCCG ATTAA TGGCCTGG TTTTTATTTAGATAA TERM 2668 1741996 - 1741976 - T 93 -9.7 -5.0916 | opp_overlap 1741976, overlap 1741970 TCTCCAATATAAAAA CCAGGCC GATTAAT GGCCTGG TTTTTATTTAGATAA yoeB 1742546 - 1742004 - | hypothetical protein TERM 2669 1742055 - 1742068 + g 71 -3.1 -4.98531 | TTTTTGTCCTTTTTC GAACG TAAC TGTTC TTTTTACTTTGCGCC BPUM_1685 1742841 - 1743275 + | hypothetical protein TERM 2670 1743282 - 1743315 + T 100 -9 -5.53991 | gap 1, opp_overlap 1743282 TGTTCATAAAAAAAA GCCGGT-TCTCATCA TTAGC TGATGAAATACCGGC TTTTTTTAGTGAATA TERM 2671 1743315 - 1743282 - T 100 -11.2 -5.93809 | gap 1, opp_overlap 1743282 TGTTCATAAAAAAAA GCCGGT-TCTCATCA TTAGC TGATGAAATACCGGC TTTTTTTAGTGAATA lexA 1743941 - 1743321 - | LexA repressor TERM 2672 1744035 - 1744021 - H 81 -4.3 -5.41143 | opp_overlap 1744021 TAGGTTCGAAAAAAA CGTTT GACAG AAACG TTTGTTCGTATTTAT yneA 1744101 - 1744412 + | LysM family cell division regulator yneB 1744430 - 1745077 + | recombinase ynzC 1745147 - 1745377 + | hypothetical protein TERM 2673 1745404 - 1745424 + F 89 -6.2 -5.54079 | opp_overlap 1745404 CTTGAATTTTGAAAA GATGGGAA AAACA TTCTCATC TTTTTTCATTTTTGC tkt 1745565 - 1747568 + | transketolase TERM 2674 1747601 - 1747632 + F 100 -10.3 -6.07374 | TGCTTTTTTTCAACT GTTTGCAGAGC ATTTTCATCC GCTCTGCAAAC TTTTTTCTTTTTTCT TERM 2675 1748076 - 1748088 + G 71 -9.1 -3.28712 | opp_overlap 1748073 GCTATATCCAAATGT CTGCC ACC GGCAG TTATGAAGCAGAAGC yneE 1747766 - 1748212 + | hypothetical protein yneF 1748297 - 1748515 + | hypothetical protein TERM 2676 1748553 - 1748583 + T 91 -12.8 -3.19246 | opp_overlap 1748557 1748560, overlap 1748557 GATGGAACATGGTTA TAAAGAATGGACAA GCG TTGTCCCTTCTTTA TTGAATTCACCTTCA TERM 2677 1748579 - 1748557 - T 81 -9.2 -3.89501 | opp_overlap 1748553 1748557, overlap 1748560 GAACATGGTTATAAA GAATGGACAA GCG TTGTCCCTTC TTTATTGAATTCACC TERM 2678 1748557 - 1748579 + T 85 -9.2 -4.2528 | opp_overlap 1748557 1748560, overlap 1748553 GAACATGGTTATAAA GAATGGACAA GCG TTGTCCCTTC TTTATTGAATTCACC TERM 2679 1748689 - 1748704 + T 75 -4.6 -5.06223 | opp_overlap 1748689, overlap 1748684 CTAAAAAAACAAAAA CCCCTG TGAT CAGAGG TTTTGTTTCGTTTAT TERM 2680 1748704 - 1748689 - T 100 -6.8 -5.86609 | opp_overlap 1748689 1748684 CTAAAAAAACAAAAA CCCCTG TGAT CAGAGG TTTTGTTTCGTTTAT ynzD 1748967 - 1748779 - | hypothetical protein TERM 2681 1749191 - 1749203 + G 75 -5.5 -4.83243 | TTCTTTTTAGCCTTT GGAGC AGG GTTCC TTTCTTTTATCTCAC ccdA 1749161 - 1749868 + | stage V sporulation cytochrome c-type biogenesis protein yneJ 1749963 - 1750445 + | hypothetical protein TERM 2682 1750444 - 1750468 + T 76 -7.2 -4.2679 | opp_overlap 1750430 1750447, overlap 1750447 AGGTTCAAATGAATT AAACCTCCTT TTTAT AAGGAGGTTA TTTTAATAAAGCTTC TERM 2683 1750465 - 1750447 - T 79 -8.9 -4.04394 | opp_overlap 1750447 1750444, overlap 1750430 TTCAAATGAATTAAA CCTCCTT TTTAT AAGGAGG TTATTTTAATAAAGC TERM 2684 1750447 - 1750465 + T 83 -8.9 -4.25256 | opp_overlap 1750430 1750447, overlap 1750444 TTCAAATGAATTAAA CCTCCTT TTTAT AAGGAGG TTATTTTAATAAAGC yneK 1750894 - 1750466 - | hypothetical protein TERM 2685 1751156 - 1751128 - R 79 -10.3 -3.22521 | opp_overlap 1751123 1751130, overlap 1751130 TTGACACGAACGGAA GAGAGCCCACC AAATGAA GGTGGGCTCTT AATGTTTGAAATGCG TERM 2686 1751154 - 1751130 - R 91 -12.9 -3.1739 | opp_overlap 1751130 1751123, overlap 1751128 GACACGAACGGAAGA GAGCCCACC AAATGAA GGTGGGCTC TTAATGTTTGAAATG TERM 2687 1751130 - 1751154 + r 95 -12.9 -3.46285 | opp_overlap 1751128 1751130, overlap 1751123 GACACGAACGGAAGA GAGCCCACC AAATGAA GGTGGGCTC TTAATGTTTGAAATG TERM 2688 1751646 - 1751625 - R 88 -10.9 -4.323 | GTGAAAGACCTAAAA CATCCCGCT TTGC AACGGGATG AGAGGAGAATGCTTA sspP 1751805 - 1751659 - | small acid-soluble spore protein P sspO 1751968 - 1751822 - | acid-soluble spore protein O TERM 2689 1752263 - 1752241 - g 73 -3.5 -4.91712 | opp_overlap 1752221, overlap 1752221 1752219 1752235 TTCAATCTAGAAAAA CGTTTTC GACAAATGG GAAAACG TATCACTATTATTCG TERM 2690 1754335 - 1754325 - g 73 -8.2 -3.68324 | overlap 1754323 TACTTGCAAGAAAGA GGCG TAT CGCC TAGAGACTTTAACTC citB 1752189 - 1754918 + | aconitate hydratase TERM 2691 1754934 - 1754964 + F 100 -7.7 -5.42259 | opp_overlap 1754934 TACTCATACAGCAAA GAAGAGAAGGC GCCTAGACA GCTTTCTCTTC TTTTTTTAAAAATAG yneN 1754993 - 1755496 + | hypothetical protein TERM 2692 1755484 - 1755505 + F 89 -6.6 -5.43514 | opp_overlap 1755484 AGAAATTGAGCAAGA GCTGGATC TATAAT GATTCAGC TTTTTTGCTTATTTT BPUM_1701 1755559 - 1755693 + | hypothetical protein sspN 1755742 - 1755888 + | acid-soluble spore protein N tlp 1755902 - 1756144 + | small acid-soluble spore protein Tlp TERM 2693 1756163 - 1756142 - f 83 -11.7 -3.12847 | opp_overlap 1756142 1756146, overlap 1756146 AATGGCTATACTGAA TAAACCAGG GATT CCTGGTTTA TTTTATTGCCTCCTT TERM 2694 1756142 - 1756163 + F 100 -11.7 -4.69656 | opp_overlap 1756142 1756146, overlap 1756146 AATGGCTATACTGAA TAAACCAGG GATT CCTGGTTTA TTTTATTGCCTCCTT TERM 2695 1756159 - 1756146 - f 82 -8.1 -4.23213 | opp_overlap 1756142 1756146, overlap 1756142 GCTATACTGAATAAA CCAGG GATT CCTGG TTTATTTTATTGCCT TERM 2696 1756146 - 1756159 + F 90 -8.1 -4.88795 | opp_overlap 1756146 1756142, overlap 1756142 GCTATACTGAATAAA CCAGG GATT CCTGG TTTATTTTATTGCCT yneP 1756248 - 1756670 + | 4-hydroxybenzoyl-CoA thioesterase yneQ 1756674 - 1756985 + | hypothetical protein TERM 2697 1757030 - 1756980 - T 70 -8.7 -3.15999 | gap 1, opp_overlap 1756988 1757028, overlap 1756983 1756995 GGGCTATATATTGAA GGATAAAACAAAAAAGATACCCGA GGGA TGAGGTATCTTTTTTG-TTTATTC ATAATGAAATTCTGG TERM 2698 1756988 - 1757023 + T 85 -9.3 -4.2704 | gap 1, opp_overlap 1756983 1756980 1756995 TATTGAAGGATAAAA CAAAAAAGATACC-CG AGGGA TGAGGTATCTTTTTTG TTTATTCATAATGAA TERM 2699 1757016 - 1756995 - T 93 -3.7 -5.86976 | opp_overlap 1756988, overlap 1756983 1756980 GGATAAAACAAAAAA GATACCCGA GGGA TGAGGTATC TTTTTTGTTTATTCA yneR 1757312 - 1757025 - | hypothetical protein TERM 2700 1757130 - 1757102 - G 93 -12.7 -3.01785 | opp_overlap 1757101 1757100 1757104 1757121, overlap 1757095 1757104 1757121 TGTCAAAATACCACA TATCACTTTCTTC CAC GAAGAAAGTAATA CCTTCTATTTCAGCG TERM 2701 1757128 - 1757104 - G 79 -10.9 -3.05807 | opp_overlap 1757101 1757100 1757104 1757121, overlap 1757102 1757095 1757121 TCAAAATACCACATA TCACTTTCTTC CAC GAAGAAAGTAA TACCTTCTATTTCAG yneS 1758001 - 1757414 - | putative glycerol-3-phosphate acyltransferase PlsY TERM 2702 1758513 - 1758500 - g 74 -6.7 -4.30978 | GCTAATTGAGGAAAA TGGCA AGGT TGCCA TCATGGATTTATGTA yneT 1758150 - 1758563 + | CoA-binding protein TERM 2703 1758568 - 1758598 + F 100 -10.6 -5.4505 | opp_overlap 1758575, overlap 1758569 AAACTCATTAAATCG TCAAAAATCCTTGG TTT TCAAGGATTTTTGC TTTTTTGTTGCAGAA TERM 2704 1758569 - 1758597 + F 100 -14.1 -3.86307 | opp_overlap 1758575, overlap 1758568 AACTCATTAAATCGT CAAAAATCCTTGG TTT TCAAGGATTTTTG CTTTTTTGTTGCAGA TERM 2705 1758591 - 1758575 - f 77 -6.6 -4.64657 | opp_overlap 1758569 1758568 TTAAATCGTCAAAAA TCCTTG GTTTT CAAGGA TTTTTGCTTTTTTGT parE 1758954 - 1760921 + | DNA topoisomerase IV subunit B parC 1760924 - 1763362 + | DNA topoisomerase IV subunit A TERM 2706 1763403 - 1763364 - T 91 -10.9 -4.7458 | gap 1, opp_overlap 1763374, overlap 1763368 1763374 ATGACAATAAATAAA CAAACGAAAACCCCCTGC GATCA GCAGGGGGTTT-CTTTTA TATACAGGCCTTAGC TERM 2707 1763399 - 1763368 - T 91 -9.5 -4.86861 | gap 1, opp_overlap 1763374, overlap 1763364 1763374 CAATAAATAAACAAA CGAAAACCCCCTGC GATCA GCAGGGGGTTT-CT TTTATATACAGGCCT TERM 2708 1763374 - 1763394 + T 100 -14 -4.83243 | opp_overlap 1763368 1763364 1763374 ATAAACAAACGAAAA CCCCCTGC GATCA GCAGGGGG TTTCTTTTATATACA TERM 2709 1763394 - 1763374 - T 100 -14 -4.74219 | opp_overlap 1763374, overlap 1763368 1763364 ATAAACAAACGAAAA CCCCCTGC GATCA GCAGGGGG TTTCTTTTATATACA BPUM_1711 1763539 - 1763414 - | hypothetical protein ynfC 1763918 - 1763583 - | hypothetical protein TERM 2710 1764110 - 1764087 - R 90 -6.8 -5.53288 | gap 1, opp_overlap 1764087, overlap 1764108 TTTAATTTAAAAAAA GTGCCATGATC GAG GATCA-GACAC TTTTAGTGAACTTGT BPUM_1713 1765291 - 1764113 - | major facilitator transporter BPUM_1714 1765492 - 1765343 - | hypothetical protein TERM 2711 1766018 - 1766061 + r 82 -4.7 -5.38047 | overlap 1766024 ATCATAAAGTATCTG GATGAATCAAAATCTGGCG AATAAA CGTAGGATTTTGATTTTTC TTTTTTGTCTCAATA TERM 2712 1766024 - 1766055 + r 90 -4.5 -5.8096 | overlap 1766018 AAGTATCTGGATGAA TCAAAATCTGGCG AATAAA CGTAGGATTTTGA TTTTTCTTTTTTGTC BPUM_1716 1767383 - 1766349 - | NADH-dependent flavin dehydrogenase TERM 2713 1767476 - 1767498 + r 77 -8.5 -3.89957 | gap 1, opp_overlap 1767478 TAGCCATGTTTACAT GAGGGG-ATC AAAC GATTCCCCTC TTCTTAGTTGTTCAC BPUM_1717 1767933 - 1767502 - | MarR family transcriptional regulator BPUM_1721 1770851 - 1770270 - | flavodoxin ydzF 1770975 - 1771319 + | MarR family transcriptional regulator thrC2 1772575 - 1771472 - | threonine synthase TERM 2714 1772360 - 1772349 - G 70 -7.2 -3.82031 | TCAAGTACGATTAAA GGGG TTTG CCCC TCCCCCATTGTGACC TERM 2715 1772603 - 1772617 + r 81 -4.4 -5.37043 | opp_overlap 1772613 CCTTTGAATATTTTT TTATAT GAA ATATAA TTTTTTATATAGAGT yabJA 1773022 - 1772648 - | endoribonuclease L-PSP BPUM_1725 1773684 - 1773034 - | transcriptional regulator TERM 2716 1773813 - 1773827 + H 76 -5.6 -4.94972 | opp_overlap 1773813, overlap 1773807 CACCATATAAAAAAA GCAGCC ATT GACTGC TTTTTACTTGTGCTC TERM 2717 1773827 - 1773813 - H 100 -7.8 -5.74122 | opp_overlap 1773813 1773807 CACCATATAAAAAAA GCAGCC ATT GACTGC TTTTTACTTGTGCTC TERM 2718 1773977 - 1773990 + H 84 -2.4 -5.76633 | AAACGCGTCTTGTCT GCAT CATGAA ATGC TTTTTTTGTGTCTGA BPUM_1727 1774351 - 1774539 + | hypothetical protein TERM 2719 1774585 - 1774544 - T 93 -9.7 -5.055 | gap 1, opp_overlap 1774544 1774555 TCAATCGCTAAAAAA CCTAAACAACATCATCATTG GAA CAATGGAGAT-TTGTTTAGG TTTGTGACTTACCTT TERM 2720 1774544 - 1774585 + T 95 -11.9 -3.98484 | gap 1, opp_overlap 1774544, overlap 1774555 TCAATCGCTAAAAAA CCTAAACAACATCATCATTG GAA CAATGGAGAT-TTGTTTAGG TTTGTGACTTACCTT TERM 2721 1774555 - 1774575 + T 70 -4.7 -4.54343 | opp_overlap 1774544, overlap 1774544 AAAACCTAAACAACA TCATCATTG GAA CAATGGAGA TTTGTTTAGGTTTGT BPUM_1728 1774957 - 1774610 - | hypothetical protein TERM 2722 1774662 - 1774672 + g 75 -3.2 -5.15634 | GCGAATAAAACAAGT GCAG GAA TTGC TTTTTTAATGGGATC BPUM_1729 1775461 - 1775036 - | MarR family transcriptional regulator BPUM_1730 1776103 - 1775534 - | TetR family transcriptional regulator TERM 2723 1776165 - 1776130 - H 70 -8.5 -3.24232 | opp_overlap 1776130 1776129 TTCTTTTTAAACACA TGCTTCAATCTGTTG GATAAA CAACAAATTGAAGAA ATTATTGGTGTTGAT BPUM_1731 1776284 - 1776844 + | flavin reductase TERM 2724 1777291 - 1777279 - g 77 -6.3 -4.69027 | AAAGTGATTCAAAAA CATCA CGG TGATG AACAAGCCTATACGT BPUM_1732 1776886 - 1777797 + | hypothetical protein BPUM_1733 1777809 - 1778126 + | hypothetical protein TERM 2725 1778157 - 1778139 - f 100 -8.8 -5.24989 | opp_overlap 1778139 TGAGACACGAAAAAA GAGCAGTC GCT GGCTGCTC TTTTTGCTTATGAAC TERM 2726 1778139 - 1778157 + F 93 -11 -4.93365 | opp_overlap 1778139 TGAGACACGAAAAAA GAGCAGTC GCT GGCTGCTC TTTTTGCTTATGAAC BPUM_1735 1778641 - 1778802 + | hypothetical protein TERM 2727 1779093 - 1779111 + G 70 -3.9 -4.78572 | GATTTTTTGCCGGTA GTACGAT TGATC ATTGTAC TTTTATTCGTTCCGA BPUM_1736 1778900 - 1779667 + | hypothetical protein TERM 2728 1779644 - 1779682 + T 80 -6.1 -5.06735 | gap 1, overlap 1779645 TTTTTCAGTCATCTT G-GATGTAGCAAGGGTCA CATT TAGCGCTTGCTACATCTC TTTTTCTACTTTATC TERM 2729 1779645 - 1779680 + T 85 -9.8 -4.13732 | overlap 1779644 TTTTCAGTCATCTTG GATGTAGCAAGGGTCA CATT TAGCGCTTGCTACATC TCTTTTTCTACTTTA BPUM_1737 1780133 - 1779711 - | hypothetical protein BPUM_1738 1780524 - 1780252 - | hypothetical protein TERM 2730 1780339 - 1780324 - G 91 -7.6 -4.90455 | ACACATGCATAAAAA GGTCAT CGTA ATGACC CAATACATATTCGAC TERM 2731 1780680 - 1780705 + r 95 -12 -4.2349 | opp_overlap 1780680 GATTGTATTTAAAAA GACTGCTTAC TTGTAT GTAAGCAGTC TTTTGGGTGTGAACC TERM 2732 1780705 - 1780680 - R 100 -12 -4.66609 | opp_overlap 1780680 GATTGTATTTAAAAA GACTGCTTAC TTGTAT GTAAGCAGTC TTTTGGGTGTGAACC BPUM_1739 1781653 - 1780727 - | esterase BPUM_1740 1782082 - 1781684 - | transcriptional regulator TERM 2733 1782031 - 1782045 + g 90 -5.7 -5.41746 | AGTAACGAATTGCGG CAGGA CTTAC TCCTG TTTTTTTGGCAAGTT TERM 2734 1782294 - 1782246 - R 100 -14.7 -4.20516 | opp_overlap 1782251 1782254 1782285, overlap 1782251 TTTTCAGTTAACAAA TAAAACACCATCGCGCCCGTC AAATAAA GGCGGGCGCAATGATGTTTTC ATCATTCATTCTAGA TERM 2735 1782251 - 1782289 + r 100 -12.4 -4.37013 | opp_overlap 1782251 1782246, overlap 1782254 1782285 AGTTAACAAATAAAA CACCATCGCGCCCGTC AAATAAA GGCGGGCGCAATGATG TTTTCATCATTCATT TERM 2736 1782289 - 1782251 - R 100 -14.6 -5.10665 | opp_overlap 1782251 1782254 1782285, overlap 1782246 AGTTAACAAATAAAA CACCATCGCGCCCGTC AAATAAA GGCGGGCGCAATGATG TTTTCATCATTCATT TERM 2737 1782254 - 1782286 + r 90 -12.7 -2.86033 | opp_overlap 1782251 1782246, overlap 1782251 1782285 TAACAAATAAAACAC CATCGCGCCCGTC AAATAAA GGCGGGCGCAATG ATGTTTTCATCATTC BPUM_1741 1783776 - 1782310 - | glycosyl hydrolase BPUM_1742 1785692 - 1783800 - | PTS family glucose/glucoside (glc) porter component IIBCA TERM 2738 1784530 - 1784552 + g 86 -3.4 -5.58454 | CCACCGACTGCGCCG CCAATTAATG AAG CATAAAATGG TTTTTTTAGTCTAAG TERM 2739 1785165 - 1785181 + g 72 -6.5 -4.31329 | CCCTGCTAATGCGAG CGCAAGA GAT TCTCGCG TTTTAAACTTTTTCG TERM 2740 1785779 - 1785723 - R 91 -3.5 -5.93809 | gap 3, opp_overlap 1785755 TTTTCACAAAAAAAA CCTAAACAAAATCCACCATTAGAAAAGA TCAT TCTTCT-TCATGG-AGAT-TTGTTTAGG TTAATGCTTTTTCAT BPUM_1743 1786654 - 1785812 - | transcription antiterminator TERM 2741 1786413 - 1786431 + g 77 -3.9 -5.17576 | gap 1, overlap 1786415 TTCTTATTCAACATC TC-TTCGC CCAC GCGAATGA TTTTTTCAGTTAATA BPUM_1744 1787029 - 1787337 + | hypothetical protein TERM 2742 1787374 - 1787351 - T 93 -10.4 -5.15381 | gap 1, opp_overlap 1787351 AATAGATGGAAAAAA CGGTTCTG-TC ATT GAGCAGAACCG TTTTTTTGTATGTCT TERM 2743 1787351 - 1787374 + T 100 -10.4 -5.77988 | gap 1, opp_overlap 1787351 AATAGATGGAAAAAA CGGTTCTG-TC ATT GAGCAGAACCG TTTTTTTGTATGTCT BPUM_1745 1788795 - 1787392 - | sensor histidine kinase BPUM_1746 1789505 - 1788798 - | response regulator TERM 2744 1789023 - 1789047 + g 82 -5.7 -4.93547 | gap 1 CAACATAAGTTCTTT CGGAGTGAGC TCAATC GC-CGCTCCG TTTTTCGTTAGTTCA TERM 2745 1789589 - 1789629 + r 76 -10.7 -2.88854 | opp_overlap 1789571 1789594, overlap 1789594 TCTATTTACACAGAA AAAAAGCCAATTTTCTTTT TTA ATGAGAAAATTGGCTTTTG GTGTTTATTTAGCGT TERM 2746 1789624 - 1789594 - R 100 -8.5 -5.76633 | opp_overlap 1789589 1789594 TTACACAGAAAAAAA GCCAATTTTCT TTTTTAATG AGAAAATTGGC TTTTGGTGTTTATTT TERM 2747 1789594 - 1789624 + r 89 -10.6 -4.56802 | opp_overlap 1789594, overlap 1789589 TTACACAGAAAAAAA GCCAATTTTCTTTT TTA ATGAGAAAATTGGC TTTTGGTGTTTATTT ynfF 1790903 - 1789638 - | glycosyl hydrolase xynD 1792473 - 1790938 - | endo-1,4-beta-xylanase TERM 2748 1791753 - 1791731 - G 74 -4.8 -4.78848 | overlap 1791732 1791734 TCTTCAAACATAAAA GGAGCATCAA TGG TTGATGCGCT GCCGGCCACACTTGT TERM 2749 1791752 - 1791732 - G 71 -8.3 -3.46586 | overlap 1791731 1791734 CTTCAAACATAAAAG GAGCATCAA TGG TTGATGCGC TGCCGGCCACACTTG TERM 2750 1791750 - 1791734 - G 74 -9.5 -3.29421 | overlap 1791732 1791731 TCAAACATAAAAGGA GCATCAA TGG TTGATGC GCTGCCGGCCACACT TERM 2751 1792681 - 1792635 - R 74 -9.9 -2.84634 | gap 1, opp_overlap 1792638 1792646, overlap 1792638 1792646 TTTTAGACTAGGAGA CAACTAA-AAAATGCAGTTC TCCTTTTG GAACTGCATTTTCTTAGTTA ATTTATGAGTGTTGA TERM 2752 1792638 - 1792678 + r 80 -10.1 -3.6239 | gap 1, opp_overlap 1792635 1792638 1792646, overlap 1792646 TAGACTAGGAGACAA CTAA-AAAATGCAGTTCT CCTTTT GGAACTGCATTTTCTTAG TTAATTTATGAGTGT TERM 2753 1792678 - 1792638 - R 78 -9.4 -3.56987 | gap 1, opp_overlap 1792638 1792646, overlap 1792635 1792646 TAGACTAGGAGACAA CTAA-AAAATGCAGTTC TCCTTTTG GAACTGCATTTTCTTAG TTAATTTATGAGTGT TERM 2754 1792646 - 1792669 + r 84 -7.5 -4.81082 | opp_overlap 1792638 1792635 1792646, overlap 1792638 GAGACAACTAAAAAA TGCAGTTCT CCTTTT GGAACTGCA TTTTCTTAGTTAATT TERM 2755 1792669 - 1792646 - R 89 -6.8 -5.35354 | opp_overlap 1792646 1792638, overlap 1792638 1792635 GAGACAACTAAAAAA TGCAGTTC TCCTTTTG GAACTGCA TTTTCTTAGTTAATT mmsA 1794157 - 1792697 - | methylmalonate-semialdehyde dehydrogenase (acylating) TERM 2756 1794484 - 1794464 - R 100 -11.2 -5.67063 | TGCAGCATAAAAAAA CCTGATGC GCATT GCATCAGG TAGGGGCTAGTTTAT melA 1795836 - 1794496 - | alpha-galactosidase TERM 2757 1795145 - 1795158 + g 75 -3.1 -5.19819 | TCAAAACGTACCATA TCATG ATGC CGTGA TTTTTGCTTTTCTTT amyC 1796700 - 1795870 - | sugar ABC transporter ATP-binding/membrane protein amyD 1797632 - 1796700 - | sugar ABC transporter ATP-binding/membrane protein msmE 1798919 - 1797663 - | sugar ABC transporter ATP-binding protein msmR 1800178 - 1799138 - | transcriptional regulator TERM 2758 1800354 - 1800337 - R 78 -5.6 -5.03747 | opp_overlap 1800337 AAATTGCGTAAAAAA GAGGAT TGTTTC ATCCTC TTTTACTAATGTGAT BPUM_1755 1801052 - 1800360 - | allulose-6-phosphate 3-epimerase ulaA 1802332 - 1801070 - | ascorbate-specific PTS system enzyme IIC sgaB 1802624 - 1802358 - | PTS family L-ascorbate (L-asc) porter component IIB BPUM_1758 1804676 - 1802640 - | PTS family L-ascorbate (L-asc) porter component IIA TERM 2759 1803244 - 1803265 + g 82 -2.3 -5.67063 | gap 1 AACCTGGTTTCTGCA CCTT-CTCCA TAT TGAAGTAAGG TTTTTTTCTCATAGG TERM 2760 1804076 - 1804057 - G 70 -7.2 -3.81473 | gap 1, opp_overlap 1804060 AAAAAGAGATCCAAA GACA-GCTG ATC CAGCATGTC ATCAGCAAACTCGAG TERM 2761 1804167 - 1804182 + g 76 -2.6 -5.32882 | opp_overlap 1804168, overlap 1804168 CTTTAACCAAAAAGA TGAAAA CGCT TTTTCG TTTTTTATCATGGTG TERM 2762 1804945 - 1804919 - R 90 -6.6 -5.61913 | opp_overlap 1804919 AATAAACACAAAAAA CCTTGAATGG TATAAAG CCAATCAAGG TTTTTTTCACTTCTT TERM 2763 1804919 - 1804945 + r 93 -7.3 -5.57054 | opp_overlap 1804919 AATAAACACAAAAAA CCTTGAATGGT ATAAA GCCAATCAAGG TTTTTTTCACTTCTT BPUM_1759 1805437 - 1804997 - | hypothetical protein TERM 2764 1805344 - 1805359 + g 84 -2.6 -5.74086 | TTTGTTCTATTAAAT CTAAAA AAAT TTTTGG TTTTTTATTTACTTT TERM 2765 1805577 - 1805603 + H 76 -3.9 -5.18357 | gap 1, opp_overlap 1805595, overlap 1805595 TCCGTCTCTGACAAA GCATATTTCGTT TGCA AATGAAA-ATGC TTTTTTCATCAATTG TERM 2766 1805674 - 1805662 - H 72 -4.9 -4.73677 | TTTATAACAAACAAA TCATT TAA AATGA ACGCATCCCCCTTCT BPUM_1760 1805787 - 1806011 + | hypothetical protein BPUM_1761 1806535 - 1806077 - | hypothetical protein BPUM_1762 1806990 - 1806628 - | hypothetical protein BPUM_1763 1807473 - 1807141 - | hypothetical protein BPUM_1764 1809148 - 1807520 - | hypothetical protein TERM 2767 1809150 - 1809163 + r 71 -6.7 -4.19258 | GACCTTGTATCCATG GCACT GGTT AGTGC TTTTGCATCAAGTAT BPUM_1765 1809994 - 1809524 - | MarR family transcriptional regulator TERM 2768 1810017 - 1810043 + H 71 -3.8 -4.87052 | opp_overlap 1810020, overlap 1810009 1810019 1810020 TCCTCCCTTTAAAAT AAATTATCTTGA TCA TCAAGATAAATG TTTTCTTCCTTTATA TERM 2769 1810020 - 1810040 + H 75 -9.9 -3.00235 | opp_overlap 1810020, overlap 1810019 1810017 TCCCTTTAAAATAAA TTATCTTGA TCA TCAAGATAA ATGTTTTCTTCCTTT TERM 2770 1810040 - 1810020 - H 89 -9.9 -4.64861 | opp_overlap 1810019 1810017 1810020 TCCCTTTAAAATAAA TTATCTTGA TCA TCAAGATAA ATGTTTTCTTCCTTT TERM 2771 1811512 - 1811496 - g 74 -6.5 -4.45117 | overlap 1811498 GATATTTTAAATAAA GTCATCG ATG CGATGTC ACAAAGTATTACGTA BPUM_1766 1810041 - 1811633 + | major facilitator transporter TERM 2772 1811643 - 1811663 + T 100 -9 -5.65927 | opp_overlap 1811643 GAATAATGTGAAAAA GCAGAGCT TAAGC GGCTCTGC TTTTTTGTTTCACTG TERM 2773 1811663 - 1811643 - T 87 -8.3 -4.70626 | opp_overlap 1811643 GAATAATGTGAAAAA GCAGAGC TTAAGCG GCTCTGC TTTTTTGTTTCACTG BPUM_1767 1812542 - 1811673 - | fructose-bisphosphate aldolase BPUM_1768 1813003 - 1812545 - | PTS family fructose/mannitol porter component IIA fruAA 1814434 - 1813019 - | PTS family fructose porter component IIBC TERM 2774 1814336 - 1814352 + g 85 -7.3 -4.7497 | TTTGATGTCTACCCC TAGTTGC TCA GCAGCTA TTTTTAATGCCTCAG BPUM_1770 1815361 - 1814447 - | 1-phosphofructokinase TERM 2775 1815455 - 1815480 + r 100 -8.3 -5.3236 | opp_overlap 1815455 TTTTCATCATAAAAA GCCTTCCAGAT CAAA GTCTCGAAGGC TTTTTTATCGGTTAT TERM 2776 1815480 - 1815455 - R 86 -7.6 -4.91109 | opp_overlap 1815455 TTTTCATCATAAAAA GCCTTCCAGA TCAAAG TCTCGAAGGC TTTTTTATCGGTTAT BPUM_1771 1816268 - 1815492 - | transcriptional regulator TERM 2777 1816427 - 1816437 + G 81 -5.4 -5.23292 | AAAGGAGCTGATCAT GATG CTT CATC TTTTGTTTTATCTCA TERM 2778 1817337 - 1817304 - g 71 -3.1 -5.00616 | gap 1, opp_overlap 1817306 1817330, overlap 1817306 1817330 CTTGTGCTGAAAAAA CTGAACGATCTTGCGC ACC GGGCAA-AGCGTTCTG TGCTCATACAGACGC TERM 2779 1817781 - 1817765 - g 100 -6.6 -6.02914 | opp_overlap 1817765 TGGACAGAAAAAAAA GCCTTT GATGA AAAGGC TCCTGTTAAATGGAT BPUM_1772 1816425 - 1817834 + | phospholipase D TERM 2780 1817839 - 1817862 + T 93 -10.2 -5.10208 | opp_overlap 1817836 1817839, overlap 1817836 GATTGATATAAAGTA GGGCAGCTAC TCTT GTGGCAGCCC TTTTTCTTGCGATTG BPUM_1773 1818330 - 1817845 - | hypothetical protein BPUM_1774 1819032 - 1818352 - | Crp family transcriptional regulator TERM 2781 1819026 - 1819008 - G 78 -6 -4.76312 | TATAATAGGCAAAAA GAGATTCA TCA TGAAGCTC CTCCATCTGATGCCC BPUM_1775 1819471 - 1819046 - | hypothetical protein TERM 2782 1820587 - 1820574 - g 71 -4.5 -4.60487 | GATCAGTTTGAAAAA GCGCT ACTG AACGC CCTACCGAAGTTTAC BPUM_1776 1819683 - 1821110 + | aldehyde dehydrogenase TERM 2783 1821125 - 1821146 + F 100 -13.1 -5.66684 | opp_overlap 1821125 AACAGGTAGATAAAA GGAAAACGG ATGG CCGTTTTCC TTTTTTTATGCCTTC TERM 2784 1821146 - 1821125 - f 100 -13.1 -4.56961 | opp_overlap 1821125 AACAGGTAGATAAAA GGAAAACGG ATGG CCGTTTTCC TTTTTTTATGCCTTC cysJ 1821322 - 1823142 + | sulfite reductase (NADPH) alpha subunit TERM 2785 1823129 - 1823119 - f 79 -6.8 -4.77036 | TTGCAGCAGCAAAAA CGCT ATC AGCG CGACGTATATTAATG cysI 1823180 - 1824898 + | sulfite reductase subunit beta TERM 2786 1824892 - 1824934 + T 100 -15.9 -3.84017 | opp_overlap 1824898 1824904, overlap 1824893 1824904 CACGAACTTTCATGT GCAATAGGAAAAGACAGGA CTCTC TCCTGTCTTTTTCTATTGA TTCTGTTTCCGGTTC TERM 2787 1824893 - 1824933 + T 100 -19.4 -2.89687 | opp_overlap 1824898 1824904, overlap 1824892 1824904 ACGAACTTTCATGTG CAATAGGAAAAGACAGGA CTCTC TCCTGTCTTTTTCTATTG ATTCTGTTTCCGGTT TERM 2788 1824928 - 1824898 - T 79 -11.3 -3.04144 | opp_overlap 1824893 1824892 1824904, overlap 1824904 CTTTCATGTGCAATA GGAAAAGACAGGA CTCTC TCCTGTCTTTTTC TATTGATTCTGTTTC TERM 2789 1824904 - 1824922 + T 91 -8.9 -5.1485 | opp_overlap 1824898 1824904, overlap 1824893 1824892 TGTGCAATAGGAAAA GACAGGA CTCTC TCCTGTC TTTTTCTATTGATTC TERM 2790 1824922 - 1824904 - T 84 -8.9 -4.4261 | opp_overlap 1824904 1824893 1824892, overlap 1824898 TGTGCAATAGGAAAA GACAGGA CTCTC TCCTGTC TTTTTCTATTGATTC acsA2 1826859 - 1824928 - | acetate--CoA ligase yngE 1828406 - 1826877 - | acetyl-CoA carboxylase TERM 2791 1827917 - 1827895 - G 74 -4.9 -4.86001 | gap 1, overlap 1827907 1827910 ACGATGTCACAAAAA GCAGGA-ATG TAAG CACCTCCTGC CGCAGAAGGGCCAAA TERM 2792 1828435 - 1828445 + r 71 -3.2 -5.06414 | overlap 1828425 TAGTTGCCCCTGTAA TGAG GCG CTCG TTTTTCTTGAAAAGC yngF 1829201 - 1828419 - | enoyl-CoA hydratase yngG 1830124 - 1829216 - | hydroxymethylglutaryl-CoA lyase TERM 2793 1829897 - 1829908 + g 86 -5.8 -5.36441 | opp_overlap 1829897 TATAAGTGCAGCATA GGTG ATGT CACC TTTTTTGTGTAAGGA pycAA 1830351 - 1830136 - | acetyl-CoA carboxylase yngH 1831697 - 1830348 - | acetyl-CoA carboxylase alpha subunit TERM 2794 1831408 - 1831396 - G 71 -4.8 -4.72497 | GATGGACCAATAAAA GCGA TTCCT TCGC TGCGGCATCGTTCAG yngI 1833343 - 1831706 - | long-chain-fatty-acid--CoA ligase TERM 2795 1833283 - 1833293 + g 75 -2.4 -5.30339 | TGGCTTCATGTGCTG GGTG CTG CTCC TTTTTCTCTTTTAGT yngJ 1834528 - 1833386 - | acyl-CoA dehydrogenase TERM 2796 1834635 - 1834663 + r 71 -6.8 -4.12397 | gap 1, opp_overlap 1834635 AAATAATAGAAAAAA GCATGAACGAAGG AAAT CCT-CATTCATGC TTTCTCATTATCTCA TERM 2797 1834663 - 1834635 - R 100 -10.4 -5.57729 | opp_overlap 1834635 AAATAATAGAAAAAA GCATGAACGAAG GAAAT CCTCATTCATGC TTTCTCATTATCTCA BPUM_1787 1836089 - 1834671 - | hypothetical protein TERM 2798 1835528 - 1835542 + g 73 -2.8 -5.21709 | overlap 1835530 TGAATGCCTTTTTTC CATATG TTT CATACG TTTTTTGATCTGGGA ptp 1837040 - 1836234 - | protein-tyrosine-phosphatase TERM 2799 1837610 - 1837599 - g 74 -4.4 -4.96848 | opp_overlap 1837599 TGCTTGAGAGAAAAA CGAA TTCT TTCG TTGGCTATCAAAGTG iolR 1837163 - 1837927 + | DeoR family transcriptional regulator TERM 2800 1837940 - 1837965 + T 100 -14.1 -4.02021 | opp_overlap 1837940, overlap 1837943 TAGACGTAACAAAAA CAACGGCTCAG GTAG TTGAGCCGTTG TTTGATTCATTGATT TERM 2801 1837965 - 1837940 - T 100 -13.4 -5.12068 | opp_overlap 1837940 1837943 TAGACGTAACAAAAA CAACGGCTCA GGTAGT TGAGCCGTTG TTTGATTCATTGATT TERM 2802 1837943 - 1837962 + T 85 -10 -4.12043 | opp_overlap 1837940, overlap 1837940 ACGTAACAAAAACAA CGGCTCAG GTAG TTGAGCCG TTGTTTGATTCATTG BPUM_1790 1838552 - 1837947 - | hypothetical protein TERM 2803 1839107 - 1839095 - g 73 -5.5 -4.66609 | opp_overlap 1839100 GATCTCACTGAAAAA GCAGC GCG GCTAC AGCTTGATGTTAATA TERM 2804 1839237 - 1839250 + G 70 -3.7 -4.78107 | AAATGATCGTCCGCT GGGGG CATG CCCGC TTTTTGCTCATGCTG BPUM_1791 1838660 - 1839784 + | carbohydrate diacid transcriptional regulator TERM 2805 1839784 - 1839810 + F 84 -4.5 -5.67063 | gap 1 GCCTGATATTTTGTA GAATCGTC-CAT AGGC ATGAGGCGGTTC TTTTTTTATACTGAA TERM 2806 1840425 - 1840442 + G 71 -4.9 -4.69214 | gap 1 CGCAAAAGACGTGGC CGGGT-AT GAT ATGACCCG TTTATTTGTTGGATC glcD 1839856 - 1841271 + | (S)-2-hydroxy-acid oxidase subunit D TERM 2807 1841834 - 1841855 + G 73 -2.9 -5.17353 | overlap 1841836 ATTCAAAGCCATTGG CACAACAAG AAAG CGTGTTGCG TTTTTTACTGGCTGT glcF 1841268 - 1842611 + | (S)-2-hydroxy-acid oxidase subunit F TERM 2808 1842591 - 1842615 + F 100 -10 -5.53991 | opp_overlap 1842591 CACTATGGGAAAGAA GCGTCCAGCT CATCA AGCTGAACGC TTTTTTTCATGCATA TERM 2809 1842615 - 1842591 - f 100 -12.9 -3.94634 | opp_overlap 1842591 CACTATGGGAAAGAA GCGTCCAGCTC ATC AAGCTGAACGC TTTTTTTCATGCATA TERM 2810 1842734 - 1842712 - g 80 -2.7 -5.44198 | overlap 1842714 AACAAACAACAAAAA GACCCAAAT TCAGT ATTTGAGGC ATTGTCACGTTCCTC TERM 2811 1843055 - 1843036 - g 85 -7.1 -4.88795 | ATTGAAGAAAAGAAA GGCAGAC AAGTAG GTCCGCC TGAGATTGAATTTGG gerA 1842676 - 1844169 + | spore germination protein A gerB 1844182 - 1845282 + | APC family amino acid-polyamine-organocation transporter gerC 1845261 - 1846379 + | spore germination protein C BPUM_1797 1846574 - 1846392 - | hypothetical protein BPUM_1799 1847419 - 1847189 - | hypothetical protein TERM 2812 1847900 - 1847919 + G 74 -4.3 -5.0133 | TTTATATACTGGATC GGTCTTT ATGGCG GAAGACC TTTTTTAACAAAGTA TERM 2813 1848065 - 1848081 + G 75 -3 -5.1361 | ATCTCCATTCCAGCT GGTATT GCCAA AATGCC TTTTTTGAAATTTGT TERM 2814 1848278 - 1848264 - g 100 -5.7 -5.93809 | TCGTCATAAAAAAAA TTCGG ACGAA CCGAA AACGGACAATCTAAT BPUM_1800 1847690 - 1848292 + | hypothetical protein TERM 2815 1848300 - 1848326 + T 100 -10.9 -5.38047 | opp_overlap 1848300 CAATCTAATGAAAAA CGCCTTCCACT GGCTG AGTGAAAGGCG TTTTTTCTATGAGTG TERM 2816 1848326 - 1848300 - T 100 -13.1 -4.90013 | opp_overlap 1848300 CAATCTAATGAAAAA CGCCTTCCACT GGCTG AGTGAAAGGCG TTTTTTCTATGAGTG yjjA 1849154 - 1848333 - | uroporphyrinogen-III synthase BPUM_1802 1849298 - 1849918 + | hypothetical protein TERM 2817 1849916 - 1849959 + T 91 -9.3 -5.07486 | gap 1, opp_overlap 1849928, overlap 1849928 ATTTTTACAAAAGCA TAAGTA-AAAAAAGAACTGC TTTGT GCAGTTCTTTTTTATGTTTA TTTTTCTTGCGCCTC TERM 2818 1849928 - 1849946 + T 100 -8.9 -5.61913 | opp_overlap 1849928, overlap 1849916 GCATAAGTAAAAAAA GAACTGC TTTGT GCAGTTC TTTTTTATGTTTATT TERM 2819 1849946 - 1849928 - T 100 -8.9 -5.68023 | opp_overlap 1849928 1849916 GCATAAGTAAAAAAA GAACTGC TTTGT GCAGTTC TTTTTTATGTTTATT yvbT 1850991 - 1849957 - | flavine monooxygenase TERM 2820 1851403 - 1851353 - g 100 -14.6 -3.95126 | opp_overlap 1851367, overlap 1851354 1851367 CAAAAATAATTCAAA GGGTTGGACGAAGAGGCCCAGCAG GTC CCGCTGGGCCTACCGGACCAACCG GACCTGCTGGCGGAT TERM 2821 1851402 - 1851354 - g 100 -18.1 -2.95449 | opp_overlap 1851367, overlap 1851353 1851367 AAAAATAATTCAAAG GGTTGGACGAAGAGGCCCAGCAG GTC CCGCTGGGCCTACCGGACCAACC GGACCTGCTGGCGGA TERM 2822 1851367 - 1851417 + G 77 -10.3 -3.14344 | gap 1, opp_overlap 1851354 1851353 1851367 AGGGTTGGACGAAGA GGC-CCAGCAGGTCCCGCTGGGCC TACC GGACCAACCGGACCTGCTGGCGGA TTAATCGGCGCCCTC TERM 2823 1851389 - 1851367 - g 100 -17 -3.13522 | opp_overlap 1851367, overlap 1851354 1851353 AGGGTTGGACGAAGA GGCCCAGCAG GTC CCGCTGGGCC TACCGGACCAACCGG BPUM_1804 1851151 - 1856748 + | triple helix repeat-containing collagen TERM 2824 1856750 - 1856786 + T 78 -11.2 -2.88638 | gap 1, opp_overlap 1856758, overlap 1856758 TTCGGCTTAGCTAAA CG-AAAAAAGAAAGGCT TTTC AGCCTTTCTTTTTTATG TCTCCTATGACTTTT TERM 2825 1856777 - 1856758 - T 100 -10.8 -5.38497 | opp_overlap 1856758 1856750 AGCTAAACGAAAAAA GAAAGGCT TTTC AGCCTTTC TTTTTTATGTCTCCT TERM 2826 1856758 - 1856777 + T 100 -10.8 -5.43414 | opp_overlap 1856758, overlap 1856750 AGCTAAACGAAAAAA GAAAGGCT TTTC AGCCTTTC TTTTTTATGTCTCCT cat86 1857328 - 1856768 - | chloramphenicol O-acetyltransferase BPUM_1806 1858760 - 1857393 - | MATE family multi-antimicrobial extrusion protein TERM 2827 1857782 - 1857768 - G 70 -7.8 -3.59279 | GATGATAATAATGAA TCCGCC TAT GGCGAA ATTGAGCCCTAACCC TERM 2828 1858636 - 1858595 - G 89 -6.6 -5.3104 | opp_overlap 1858614, overlap 1858596 CGAGTAAAAAGAAAA GCGGAAAGAATGCAGAAA TGGCAG CTACTGCATCCTCTCCGA TCCATCTGCCGACAA TERM 2829 1858635 - 1858596 - G 84 -10.1 -3.76997 | opp_overlap 1858614, overlap 1858595 GAGTAAAAAGAAAAG CGGAAAGAATGCAGAAA TGGCAG CTACTGCATCCTCTCCG ATCCATCTGCCGACA dacC 1860264 - 1858780 - | serine-type D-Ala-D-Ala carboxypeptidase TERM 2830 1859472 - 1859504 + g 71 -8.5 -3.4945 | opp_overlap 1859471 ATTGCCTAGATACAC TCGCTTTCACCGGAA TAG TTCCAGTCAAAGTGA TCTTGTTGGTTCCGT TERM 2831 1860384 - 1860359 - R 87 -8.4 -4.78848 | TTTTTAAACAGAAAA GTCAGCTTTC TTTGAC GAAAACTGAC ATGCCCTTTACCTTT pme 1861372 - 1860392 - | pectinesterase yetF 1862201 - 1861467 - | hypothetical protein nasE 1862552 - 1862229 - | nitrite reductase (NAD(P)H) small subunit nasD 1864987 - 1862567 - | nitrite reductase (NAD(P)H) large subunit TERM 2832 1863944 - 1863960 + g 74 -6.7 -4.35675 | overlap 1863952 1863954 TTTTTGGTAAATGCC TTTTTGA TCA TCAAAAA TTTTGATCGCTTTTT TERM 2833 1865424 - 1865400 - H 100 -14.4 -4.98255 | opp_overlap 1865396 TCTGAATCATAAAAA GCCATGACCA CTATT TGGTCATGGC TCAGCTTGTAGACAA TERM 2834 1865428 - 1865450 + H 100 -15 -5.39721 | TTTGGTCATGGCTCA GCTTGTAGAC AAA GTCTACAAGC TTTTTTGTATAATAA TERM 2835 1865918 - 1865905 - g 75 -3.1 -5.18357 | gap 1, overlap 1865906 GAAGCGATGAAAAAA GGGCTC GTT GA-CCC GTCTATCGCCTTCAT TERM 2836 1866128 - 1866104 - g 100 -9.3 -5.02645 | overlap 1866108 AAGAAACAAAAGAAA TCAAGGTCAGT ACA ACTGACCCAGA GAGTGGCTATTATGT TERM 2837 1866124 - 1866108 - g 88 -10.9 -3.85719 | overlap 1866104 AACAAAAGAAATCAA GGTCAGT ACA ACTGACC CAGAGAGTGGCTATT TERM 2838 1866461 - 1866478 + G 80 -9.9 -3.73859 | ATTTTGATTGTTACA TTTGCCC CAAC GGGCAAA TTCTCTCTTATCGTA TERM 2839 1866736 - 1866726 - g 81 -5.4 -5.10933 | GGATGCAAAAGAAAA GCAT GGT ATGC GTTGGACGAAACTTC TERM 2840 1866847 - 1866822 - g 100 -13.4 -3.98747 | TAAAAAACTAGCAAA CTGGACATGG AAAGTA CCATGTCCAG CGTAAAACACATGAT BPUM_1812 1865497 - 1866852 + | transposase TERM 2841 1866924 - 1866878 - T 93 -4.7 -5.75342 | gap 2, opp_overlap 1866886, overlap 1866886 GTTTTTCAAAAAAAA TGT-GA-AAACCCCACTTTTACT TGA AGTAAAGGTAGGGTTTGTCTACG GTCTGAGCCATGACC TERM 2842 1866914 - 1866886 - T 88 -11.1 -4.35095 | opp_overlap 1866886, overlap 1866878 AAAAAAATGTGAAAA CCCCACTTTTACT TGA AGTAAAGGTAGGG TTTGTCTACGGTCTG TERM 2843 1866886 - 1866914 + T 86 -11.1 -4.05747 | opp_overlap 1866878 1866886 AAAAAAATGTGAAAA CCCCACTTTTACT TGA AGTAAAGGTAGGG TTTGTCTACGGTCTG TERM 2844 1866931 - 1866955 + T 100 -14.4 -5.07523 | TTGTCTACGGTCTGA GCCATGACCA CTATT TGGTCATGGC TTTTCTTTATATGTG gltB 1868474 - 1866990 - | glutamate synthase subunit beta TERM 2845 1867151 - 1867161 + g 71 -4 -4.8048 | CCCCATACTTTGCGT CAAT GCG ATTG TTTTTGCTGTCCACG gltA 1873062 - 1868491 - | glutamate synthase (NADPH) large subunit TERM 2846 1870658 - 1870669 + g 81 -4.4 -5.26316 | opp_overlap 1870658 TTTGGATTAAAGGCA TGGT GCTC ACCA TTTTTTCTCCACTGG TERM 2847 1872810 - 1872827 + g 70 -3.5 -4.82901 | gap 1, opp_overlap 1872810, overlap 1872810 1872811 GGCCCTTTTCAGGAA G-TGCAAA GTC TTTGCAGC TTTTTCTAAAGAAAG TERM 2848 1873646 - 1873629 - g 74 -4.1 -5.055 | opp_overlap 1873629 1873630, overlap 1873630 TGAAGCTGTAAAAAA TCGAGAT ATTG ATCTCGC CTTTTTAGGACCTGT TERM 2849 1873645 - 1873630 - g 70 -7.6 -3.62577 | opp_overlap 1873630 1873629, overlap 1873629 GAAGCTGTAAAAAAT CGAGAT ATTG ATCTCG CCTTTTTAGGACCTG gltC 1873216 - 1874118 + | LysR family transcriptional regulator TERM 2850 1875302 - 1875288 - g 70 -5.6 -4.2803 | opp_overlap 1875288 1875287, overlap 1875297 CATTTGAAGCCAAAA CTGGCG AAA CGACAG CTATTATCGGCAGTA yfiB 1874213 - 1875946 + | ABC transporter ATP-binding protein TERM 2851 1876098 - 1876108 + G 82 -6.8 -4.84274 | overlap 1876095 TTTTATTGCAGCGGT CGGT TCA ACCG TTTTTAATGTCATTA TERM 2852 1877483 - 1877494 + G 73 -5.8 -4.57353 | opp_overlap 1877483 GCCAGCTGTTAACCA TCGC CCGT GCGA TTTTATCTGATCCAA yfiC 1875955 - 1877772 + | ABC transporter ATP-binding protein TERM 2853 1877782 - 1877810 + T 100 -12.6 -5.31059 | gap 1, opp_overlap 1877782 GGTTAATATCAAAAA GGATAGACGCGCA TCCC TGCG-GTCTATCC TTTTTTGGTTAATCT TERM 2854 1877810 - 1877782 - T 100 -12.6 -4.87626 | gap 1, opp_overlap 1877782 GGTTAATATCAAAAA GGATAGACGCGCA TCCC TGCG-GTCTATCC TTTTTTGGTTAATCT bltR 1878640 - 1877819 - | MerR family transcriptional regulator TERM 2855 1878097 - 1878107 + g 78 -5.4 -5.00884 | GATATTGACGCTGAA GGAA CTG TTCC TTTTTTAAGACAGCT yrkN 1878691 - 1879296 + | acetyltransferase TERM 2856 1879335 - 1879319 - T 100 -8 -5.75599 | opp_overlap 1879319 GAAACGATAAAAAAA CTCCCT CGTAT AGGGAG TTTCAGACCGTAGAC TERM 2857 1879344 - 1879390 + T 93 -4.7 -5.75342 | gap 2, opp_overlap 1879354, overlap 1879354 TAGGGAGTTTCAGAC CGTAGACAAACCCTACCTTTACT TCA AGTAAAAGTGGGGTTT-TC-ACA TTTTTTTTGAAAAAC TERM 2858 1879354 - 1879382 + T 88 -11.1 -4.35095 | opp_overlap 1879354, overlap 1879344 CAGACCGTAGACAAA CCCTACCTTTACT TCA AGTAAAAGTGGGG TTTTCACATTTTTTT TERM 2859 1879382 - 1879354 - T 86 -11.1 -4.05747 | opp_overlap 1879354 1879344 CAGACCGTAGACAAA CCCTACCTTTACT TCA AGTAAAAGTGGGG TTTTCACATTTTTTT TERM 2860 1879421 - 1879446 + T 100 -13.4 -3.98747 | ATCATGTGTTTTACG CTGGACATGG TACTTT CCATGTCCAG TTTGCTAGTTTTTTA BPUM_1820 1880771 - 1879416 - | transposase TERM 2861 1879532 - 1879542 + g 81 -5.4 -5.10933 | GAAGTTTCGTCCAAC GCAT ACC ATGC TTTTCTTTTGCATCC TERM 2862 1879807 - 1879790 - G 80 -9.9 -3.73859 | TACGATAAGAGAGAA TTTGCCC GTTG GGGCAAA TGTAACAATCAAAAT TERM 2863 1880140 - 1880164 + g 100 -9.3 -5.02645 | overlap 1880144 ACATAATAGCCACTC TCTGGGTCAGT TGT ACTGACCTTGA TTTCTTTTGTTTCTT TERM 2864 1880144 - 1880160 + g 88 -10.9 -3.85719 | overlap 1880140 AATAGCCACTCTCTG GGTCAGT TGT ACTGACC TTGATTTCTTTTGTT TERM 2865 1880350 - 1880363 + g 75 -3.1 -5.18357 | gap 1, overlap 1880350 ATGAAGGCGATAGAC GGG-TC AAC GAGCCC TTTTTTCATCGCTTC TERM 2866 1880840 - 1880818 - R 100 -15 -5.39721 | TTATTATACAAAAAA GCTTGTAGAC TTT GTCTACAAGC TGAAACTCCCTCGTA TERM 2867 1880862 - 1880846 - R 70 -8 -3.69354 | opp_overlap 1880846 GTCTACAAGCTGAAA CTCCCT CGTAT AGGGAG TTTTTATCATGATAG TERM 2868 1880846 - 1880862 + r 86 -8 -4.93296 | opp_overlap 1880846 GTCTACAAGCTGAAA CTCCCT CGTAT AGGGAG TTTTTATCATGATAG yjcK 1881429 - 1880869 - | ribosomal-protein-alanine N-acetyltransferase TERM 2869 1881474 - 1881498 + r 70 -2.9 -5.13473 | opp_overlap 1881474 TCATACACTAAAAAA CACTACC CCATGAAAAAA GGTAGTG TTTTTTGAATCTCAT TERM 2870 1881498 - 1881474 - R 81 -5.7 -5.24989 | opp_overlap 1881474 TCATACACTAAAAAA CACTACCCCAT GAA AAAAGGTAGTG TTTTTTGAATCTCAT proA2 1882782 - 1881514 - | glutamate-5-semialdehyde dehydrogenase TERM 2871 1881926 - 1881949 + g 74 -4.6 -4.86731 | gap 1, opp_overlap 1881927, overlap 1881917 1881927 1881927 ACATCGTGCTCAAGC AG-GGCATCAT TCA ATGATGCCGCA TTTTCTTTCAGCCAA proJ 1883914 - 1882796 - | gamma-glutamyl kinase proH 1884739 - 1883942 - | pyrroline-5-carboxylate reductase 1 TERM 2872 1884755 - 1884767 + H 70 -6.3 -4.28994 | opp_overlap 1884745 AGAACCTGCTCCAAT GAAAG CAA CTTTC TTTTGATCAATGATA BPUM_1825 1885211 - 1886407 + | cytochrome P450 TERM 2873 1886410 - 1886425 + F 90 -6.8 -5.54192 | opp_overlap 1886410 CACCCGTTTTTAAAA GTCCCT CTTA AGGGGC TTTTTTTCAATTCAT TERM 2874 1887185 - 1887161 - g 74 -5 -4.84359 | gap 1, opp_overlap 1887161, overlap 1887134 TGATGTTCACAAAAA CCAAACTGGCC GGAT GGC-AGATTGG TTCATTCCGCTTCGA TERM 2875 1888495 - 1888478 - g 72 -6.3 -4.24654 | AAAAGGCAAAAAACA GCTAGTC AATG GACTAAC ACCTGATCGGCTAGC yoaE 1886529 - 1888571 + | molybdopterin dehydrogenase TERM 2876 1888601 - 1888583 - T 93 -11 -4.88495 | ATAGACAGAAGAAAA GCCAGCAA AAA CTGCTGGC TTCAGATTGTTGACA TERM 2877 1888611 - 1888653 + T 100 -12.2 -4.60487 | opp_overlap 1888619, overlap 1888613 GCTGGCTTCAGATTG TTGACAAAGGGCTAAAATGA TCT TGATTTTAGCCCTTTGTCTC TTTTTCAGCGTGATA TERM 2878 1888613 - 1888651 + T 100 -19.2 -3.91506 | opp_overlap 1888619, overlap 1888611 TGGCTTCAGATTGTT GACAAAGGGCTAAAATGA TCT TGATTTTAGCCCTTTGTC TCTTTTTCAGCGTGA TERM 2879 1888645 - 1888619 - T 86 -11 -3.87373 | opp_overlap 1888613 1888611 CAGATTGTTGACAAA GGGCTAAAATGA TCT TGATTTTAGCCC TTTGTCTCTTTTTCA TERM 2880 1888781 - 1888800 + T 100 -9.3 -5.84432 | TGTCTACACGCTGGA GCCAGCA AAAAAC TGCTGGC TTTTTTTGTATTCTA BPUM_1827 1889502 - 1888816 - | glycoside hydrolase xylB 1891092 - 1889593 - | xylulokinase TERM 2881 1890266 - 1890251 - G 82 -7.6 -4.51743 | GCATGATGAAACAAA TGCAAG TTTC CTTGCA GCGCTCTTTCATGAT xylA 1892465 - 1891128 - | xylose isomerase xylR 1892679 - 1893839 + | transcriptional regulator TERM 2882 1893859 - 1893879 + T 100 -3.2 -6.08342 | overlap 1893848 TTCTTAGATAAAAAA GACAGCTC TTACC GTGTTGTC TTTTTTTATTTATTC xynB 1895493 - 1893889 - | xylan 1,4-beta-xylosidase TERM 2883 1894978 - 1894989 + g 71 -4.4 -4.83243 | AAAAATAACCTTCCG CTCA CCAA TGAG TTTCTTTTCTGTCAC xynP 1896908 - 1895517 - | GPH family glycoside-pentoside-hexuronide:cation symporter TERM 2884 1897106 - 1897151 + r 72 -5.8 -4.41548 | gap 1, opp_overlap 1897111 1897112, overlap 1897111 1897112 AGAGGGATCAATACT TGAAACTCATCTTAGTTTATT GACCA AACAAACTAAGATGAATT-CA TTTTATAAAATCTGA TERM 2885 1897147 - 1897111 - R 83 -11.2 -3.67517 | opp_overlap 1897111 1897106 1897112, overlap 1897112 GATCAATACTTGAAA CTCATCTTAGTTTATT GACCA AACAAACTAAGATGAA TTCATTTTATAAAAT TERM 2886 1897112 - 1897146 + r 76 -10.3 -2.84587 | opp_overlap 1897112 1897111, overlap 1897111 1897106 ATCAATACTTGAAAC TCATCTTAGTTTATT GACCA AACAAACTAAGATGA ATTCATTTTATAAAA TERM 2887 1897146 - 1897112 - R 90 -12.5 -2.80028 | opp_overlap 1897111 1897106 1897112, overlap 1897111 ATCAATACTTGAAAC TCATCTTAGTTTATT GACCA AACAAACTAAGATGA ATTCATTTTATAAAA TERM 2888 1897415 - 1897394 - R 93 -11.7 -4.28254 | opp_overlap 1897394 CCTCAATACGCAAAA GACATCTTC TTAG GAAGATGTC TTTTTTCTTACCCTA TERM 2889 1897394 - 1897415 + r 100 -11.7 -5.46657 | opp_overlap 1897394 CCTCAATACGCAAAA GACATCTTC TTAG GAAGATGTC TTTTTTCTTACCCTA csaA 1897755 - 1897423 - | secretion chaperone CsaA TERM 2890 1898158 - 1898169 + G 75 -3 -5.10497 | opp_overlap 1898158 CGGCGTCGTTGAAAT TAGA CGAA TCTA TTTTTTAGATGCATT ywmF 1897985 - 1898464 + | hypothetical protein BPUM_1835 1900085 - 1898454 - | hypothetical protein TERM 2891 1899542 - 1899559 + g 71 -4.1 -4.78981 | overlap 1899544 AAATCACCCATCCCG CCGCTTT GTAT AAAGCTG TTTCTTTTGCTTGCT BPUM_1836 1900683 - 1900078 - | hypothetical protein BPUM_1837 1901527 - 1900646 - | hypothetical protein TERM 2892 1901690 - 1901670 - R 100 -7.6 -5.55664 | opp_overlap 1901670 1901667 1901673 TCACTACCAAAAAAA GACCTGTC AATAA GACAGATC TTCTTTTTGCAACAC yobS 1902248 - 1901676 - | TetR family transcriptional regulator BPUM_1839 1902971 - 1902252 - | zinc (Zn2+)-dependent hydrolase TERM 2893 1902817 - 1902850 + g 87 -8.3 -4.56775 | gap 1, opp_overlap 1902829, overlap 1902815 1902821 1902843 ATAGGCTTGTTCTTT TGTCGAGCAAATTCGA TGA TCGAGTTTGCT-GCCA TTTTTAACGCAGCAT BPUM_1840 1903482 - 1903009 - | hypothetical protein TERM 2894 1903302 - 1903292 - G 74 -6.8 -4.32678 | opp_overlap 1903292 1903291 GCCGTAAATAAATAA GAGC CAT GCTC ATCTTTTTCATAATC TERM 2895 1903362 - 1903401 + g 82 -5.8 -4.9448 | gap 1, opp_overlap 1903372, overlap 1903364 CTCCGTGAAGCTGCT GCGCAAAAAATTGCTGCCA GAG TGG-AGCAATCTTTCGCTC TTTTGTTTGCTCCAT TERM 2896 1903364 - 1903399 + g 71 -7 -4.08958 | gap 1, opp_overlap 1903372, overlap 1903362 CCGTGAAGCTGCTGC GCAAAAAATTGCTGCCA GAG TGG-AGCAATCTTTCGC TCTTTTGTTTGCTCC TERM 2897 1903391 - 1903372 - G 82 -5.8 -5.00616 | gap 1, opp_overlap 1903364 1903362 CTGCTGCGCAAAAAA TTGCTGCCA GAG TGG-AGCAA TCTTTCGCTCTTTTG TERM 2898 1903545 - 1903518 - R 91 -9.3 -5.00895 | opp_overlap 1903522, overlap 1903522 TCTATCATATAAAAA GAAACCTGACA ACACTG TGTCAAGTTTC TAATCGTTTGAGAAA TERM 2899 1903541 - 1903522 - R 73 -4.3 -5.01422 | opp_overlap 1903522, overlap 1903518 TCATATAAAAAGAAA CCTGACA ACACTG TGTCAAG TTTCTAATCGTTTGA yobV 1904469 - 1903537 - | transcriptional regulator TERM 2900 1904887 - 1904897 + G 74 -4 -4.95487 | AACGAGTAAATGGAT TGAA AGC TTCA TTTTATGTTTGTTTT BPUM_1842 1904588 - 1905112 + | hypothetical protein TERM 2901 1905116 - 1905137 + T 85 -11.7 -3.59262 | opp_overlap 1905116 CATCATGCATAAAAA CCTTCCTAT TAAC ATAGGAAGG TTTCAGCGTGTAGAC TERM 2902 1905137 - 1905116 - T 100 -11.7 -4.88736 | opp_overlap 1905116 CATCATGCATAAAAA CCTTCCTAT TAAC ATAGGAAGG TTTCAGCGTGTAGAC TERM 2903 1905306 - 1905268 - T 100 -21.4 -4.18506 | opp_overlap 1905274, overlap 1905274 TCACGCTGAAAAGAA GACAAAGGGCTAAAATAA AGA TCATTTTAGCCCTTTGTC AACAACCTAAAACCT TERM 2904 1905300 - 1905274 - T 100 -13.2 -4.45253 | opp_overlap 1905274, overlap 1905268 TGAAAAGAAGACAAA GGGCTAAAATAA AGA TCATTTTAGCCC TTTGTCAACAACCTA TERM 2905 1905274 - 1905300 + T 84 -11 -3.86015 | opp_overlap 1905268 1905274 TGAAAAGAAGACAAA GGGCTAAAATAA AGA TCATTTTAGCCC TTTGTCAACAACCTA TERM 2906 1905319 - 1905340 + T 100 -9.5 -5.28778 | opp_overlap 1905319 GTCAACAACCTAAAA CCTTCCTAT TAAC GTAGGAAGG TTTTTTATCAATCGT TERM 2907 1905340 - 1905319 - T 83 -8.8 -4.36127 | opp_overlap 1905319 GTCAACAACCTAAAA CCTTCCTA TTAACG TAGGAAGG TTTTTTATCAATCGT yozA 1905677 - 1905348 - | transcription regulator ArsR TERM 2908 1906087 - 1906077 - g 71 -6.8 -4.08064 | opp_overlap 1906077 AAGGCTTTTCCAAAA GCAG GAT CTGC TTATACATACGCGCA TERM 2909 1906837 - 1906860 + G 71 -4 -4.80178 | overlap 1906839 1906855 GATATATTCATCCGA GATTAAAAAC GCCT GTTTTTAATA TTTTATTAATTGGTG TERM 2910 1907118 - 1907128 + G 75 -3.2 -5.22481 | ATTGGTATGCTTTGG CTGA TTA TCGG TTTTGTTTATTTCTG BPUM_1844 1905864 - 1907189 + | APC family amino acid-polyamine-organocation transporter yocA 1907287 - 1907949 + | hypothetical protein TERM 2911 1907975 - 1907955 - T 100 -11.2 -5.44721 | opp_overlap 1907958 ATCATCGTAAAAAAA GCACTTCC TTAAT GGAAGTGC TTCAGATTGTTGACA TERM 2912 1907987 - 1908025 + T 100 -21.4 -4.18506 | opp_overlap 1907993, overlap 1907993 GTGCTTCAGATTGTT GACAAAGGGCTAAAATGA TTT TTATTTTAGCCCTTTGTC TTCTTTTCAGCGTGA TERM 2913 1908019 - 1907993 - T 86 -11 -3.87373 | opp_overlap 1907993 1907987 CAGATTGTTGACAAA GGGCTAAAATGA TTT TTATTTTAGCCC TTTGTCTTCTTTTCA TERM 2914 1907993 - 1908019 + T 100 -13.2 -4.45253 | opp_overlap 1907993, overlap 1907987 CAGATTGTTGACAAA GGGCTAAAATGA TTT TTATTTTAGCCC TTTGTCTTCTTTTCA TERM 2915 1908154 - 1908174 + T 91 -11.2 -4.73108 | TTGTCTACACACTGA GCACTTCC TTAAT GGAAGTGC TTTTCATTTTATCGA yqiQ 1909100 - 1908183 - | carboxyvinyl-carboxyphosphonate phosphorylmutase prpD 1910549 - 1909113 - | 2-methylcitrate dehydratase TERM 2916 1909977 - 1909967 - G 74 -6.8 -4.37092 | ACGCTTGTGATAAAA CGTG CTG CACG TCCTCCTTTGTTCCG TERM 2917 1910363 - 1910320 - G 100 -13.2 -3.63228 | overlap 1910316 TCTAGCACAAAGGAA GTGCCTGGAACTCTTGCTCC GTTA GGTACAACAGTTCCAGGGAC GATCGGTCCAAGATG mmgD 1911694 - 1910552 - | citrate synthase 3 TERM 2918 1911302 - 1911278 - G 86 -12.1 -2.94726 | overlap 1911273 1911271 TGTGAGAATATGATA GCTTCCAGCGA CAA TCGCCGGCAGC TGGCCGAGTAATCGA TERM 2919 1911865 - 1911838 - R 100 -11.4 -4.87133 | opp_overlap 1911841, overlap 1911841 ATCTTGTAAATAAAA GAACGTATGTCC AGTT GGACATACGTTA GCTGTAATATGGAGA TERM 2920 1911841 - 1911862 + r 95 -13.1 -3.1544 | opp_overlap 1911838 1911841 TTGTAAATAAAAGAA CGTATGTCC AGTT GGACATACG TTAGCTGTAATATGG TERM 2921 1911862 - 1911841 - R 100 -13.1 -4.54026 | opp_overlap 1911841, overlap 1911838 TTGTAAATAAAAGAA CGTATGTCC AGTT GGACATACG TTAGCTGTAATATGG yozB 1912402 - 1911863 - | hypothetical protein yocC 1912529 - 1913113 + | hypothetical protein TERM 2922 1913124 - 1913151 + T 81 -7 -4.83615 | opp_overlap 1913124 1913125, overlap 1913125 1913149 GCTAACGACAAAAAA CCAGCGTGTATC ATAT GATATGCGCTGC TTTTTGTCGAAAATG TERM 2923 1913151 - 1913124 - T 76 -2.6 -5.37345 | opp_overlap 1913124 1913125 1913149, overlap 1913125 GCTAACGACAAAAAA CCAGCGTGTATC ATAT GATATGCGCTGC TTTTTGTCGAAAATG TERM 2924 1913125 - 1913150 + T 81 -10.5 -3.49687 | opp_overlap 1913124 1913125, overlap 1913124 1913149 CTAACGACAAAAAAC CAGCGTGTATC ATAT GATATGCGCTG CTTTTTGTCGAAAAT TERM 2925 1913221 - 1913242 + T 85 -10.2 -4.15044 | opp_overlap 1913221 AAGGGTACAATAAAA GCATCAGG CCGCCA CCTGATGC TTTCTTCCAAAAAAC TERM 2926 1913242 - 1913221 - T 91 -10.9 -4.78839 | opp_overlap 1913221 AAGGGTACAATAAAA GCATCAGGC CGCC ACCTGATGC TTTCTTCCAAAAAAC yocH 1914058 - 1913267 - | cell wall protein TERM 2927 1913592 - 1913614 + g 82 -4.9 -5.4148 | gap 1 GATGATTCTGCTTTA GCTGTTTCCT TTTT AGGAG-CAGC TTTTTTCGTTGTTTG yocI 1916096 - 1914315 - | ATP-dependent helicase TERM 2928 1914491 - 1914481 - G 80 -4.6 -5.22104 | opp_overlap 1914481 GAAAAAACAACAAAA GGCG GAA CACC TTGCTCTCTAGCTAG TERM 2929 1915400 - 1915413 + g 71 -2.3 -5.17744 | CAGTATAAATAATGC CAGAC TCAA GACTG TTTTTCTTCATATAT TERM 2930 1915984 - 1916000 + g 70 -5.1 -4.44046 | CCTGTCGGCATAATG CAAACGG TAT CCTTTTG TTTATTTACAATCGC TERM 2931 1916192 - 1916216 + r 95 -13.7 -3.10715 | opp_overlap 1916192 TTCGCAAAATAAAAA GCCATTTTCCG AAA TGGAAAATGGC TTGAATCATCCTAGG TERM 2932 1916216 - 1916192 - R 100 -13 -5.45802 | opp_overlap 1916192 TTCGCAAAATAAAAA GCCATTTTCC GAAAT GGAAAATGGC TTGAATCATCCTAGG TERM 2933 1916486 - 1916471 - R 75 -3.2 -5.24129 | opp_overlap 1916471 TTTTTCTATAAAAAA CTCGTG TATA CAAGAG ATTTGTCCTTGCACA yocK 1916955 - 1916548 - | general stress protein TERM 2934 1917130 - 1917108 - R 91 -6.9 -5.36314 | GAAAACATCAAAAAA GCCACCGCC TAATT GGCAGCAGC TTTCTTCTCTTACAA yhfK 1917787 - 1917140 - | hypothetical protein TERM 2935 1917887 - 1917860 - R 100 -9.2 -6.38039 | gap 1, overlap 1917877 CACGTAAAAAAAAAA GCCCTT-CCCAGA AAA TATGGGCAAGGGC TCAGGCAATGTGCGA yozO 1918303 - 1917965 - | hypothetical protein TERM 2936 1918571 - 1918550 - R 100 -10.3 -6.13503 | opp_overlap 1918550, overlap 1918541 GACCAATAAAAAAAA CAGTGATTT TTTC AAATCACTG TTTAAAAATGACTAT TERM 2937 1918550 - 1918571 + r 81 -10.3 -3.57971 | opp_overlap 1918541 1918550 GACCAATAAAAAAAA CAGTGATTT TTTC AAATCACTG TTTAAAAATGACTAT yozC 1918982 - 1918770 - | hypothetical protein dhaS 1919196 - 1920680 + | aldehyde dehydrogenase (NAD(+)) TERM 2938 1920694 - 1920714 + F 100 -13.3 -5.37345 | opp_overlap 1920684 1920694 AATGACGCCTATTAA GCCGGTGAC CAA GTCATCGGC TTTTTTGTGATTGCA TERM 2939 1920714 - 1920694 - f 80 -11.1 -3.16039 | opp_overlap 1920694, overlap 1920684 AATGACGCCTATTAA GCCGGTGAC CAA GTCATCGGC TTTTTTGTGATTGCA sqhC 1920783 - 1922657 + | squalene-hopene cyclase TERM 2940 1923133 - 1923123 - g 75 -8.2 -3.76952 | TTCAGGGAAGCGAAA GCCC ACT GGGC AAATGCTTCGCCAGA sodF 1922650 - 1923471 + | iron (Fe) superoxide dismutase TERM 2941 1923478 - 1923509 + F 100 -13.2 -4.14725 | CCTTTTTAACAACGC TACTCCATGTAGGC ATCC GCTTATATGGAGTA TTTATGGTTTACATA TERM 2942 1924288 - 1924267 - g 73 -5.9 -4.44046 | opp_overlap 1924269 1924272, overlap 1924270 GTCAGTGCAAATAAA GAGCAGATT CTTC AATCTGGTC TGCTAATATTGGCCG yocS 1923622 - 1924572 + | BASS family bile acid:sodium (Na+) symporter TERM 2943 1924568 - 1924591 + T 75 -7.5 -4.19238 | gap 1, opp_overlap 1924568 GTGAAAAGAAAAAAA GCTAGC-CCT TTAAT AGGTGCTAGC TTTTCAAATTGAAGA TERM 2944 1924591 - 1924568 - T 100 -7.5 -6.09196 | gap 1, opp_overlap 1924568 GTGAAAAGAAAAAAA GCTAGC-CCT TTAAT AGGTGCTAGC TTTTCAAATTGAAGA odhB 1925863 - 1924607 - | dihydrolipoamide acetyltransferase odhA 1928712 - 1925878 - | alpha-ketoglutarate decarboxylase TERM 2945 1926763 - 1926748 - G 74 -7.6 -3.95424 | opp_overlap 1926747, overlap 1926744 ATTATGAACAGTAAA TGATGC GTTT GCATCA CTTAGCTCATGAAGA TERM 2946 1928946 - 1928927 - R 70 -7.8 -3.65529 | opp_overlap 1928926 ATATTTTGAGGGAAA GGGGCAAA ACCT TATGCCCC AATGCTTTTATGCAG yojO 1930854 - 1928938 - | regulator of nitric oxide reductase TERM 2947 1930128 - 1930143 + g 70 -3.9 -4.77036 | opp_overlap 1930128 1930121 TCAAGTCATGAAATA GCGGT TCTTTT GCCGC TTTTTCATAATCCAA BPUM_1864 1931744 - 1930866 - | nitric oxide reductase TERM 2948 1931537 - 1931521 - G 70 -5.1 -4.41348 | opp_overlap 1931521 1931519 GGCTGCTGAAAGAAA GCAGATA AAG TTTCTGC TAGTTTTGTTTTACC TERM 2949 1931822 - 1931798 - R 100 -8.7 -5.59357 | AGTATACTAAAAAAA CCTTTATGCAC TCA ATACATAAAGG CTAGACATCTGTTAT yojM 1932454 - 1931834 - | copper/zinc (Cu/Zn) superoxide dismutase TERM 2950 1932491 - 1932463 - R 100 -13.3 -3.77831 | opp_overlap 1932471, overlap 1932471 TGATCAATAGGCAAA CAAAAAAAGCCGA AAA TCGGCTTTTTTAG AAGAAACGTTTTGCA TERM 2951 1932471 - 1932483 + r 91 -9.1 -5.00616 | opp_overlap 1932463 1932471 AGGCAAACAAAAAAA GCCGA AAA TCGGC TTTTTTAGAAGAAAC TERM 2952 1932483 - 1932471 - R 100 -9.1 -5.96894 | opp_overlap 1932471, overlap 1932463 AGGCAAACAAAAAAA GCCGA AAA TCGGC TTTTTTAGAAGAAAC TERM 2953 1933789 - 1933758 - R 73 -6.6 -4.25104 | GCCGGTGCAGCAAAA CACAGTCTGAGCCA GCGA TCGCTGAAACTGTG AGGCCGGTTACTACT TERM 2954 1934207 - 1934185 - R 100 -10.7 -5.26875 | CCTCGAATGAAAAAA GCATTCTTC CGAAT GAAGAATGC AGCGAGTGCTTTTTT BPUM_1867 1934849 - 1934235 - | hypothetical protein TERM 2955 1936155 - 1936169 + G 76 -7.8 -4.11216 | opp_overlap 1936155 1936157, overlap 1936156 TTGCTGGTTTATATA CAGCTG AAT CGGCTG TTTTACAGCTGACAC TERM 2956 1936187 - 1936157 - g 76 -10.4 -2.98823 | opp_overlap 1936155 1936156, overlap 1936155 GCTGGTTTATATACA GCTGAATCGGCTGT TTT ACAGCTGACACAGC ACTTCTTGATTTATG TERM 2957 1936462 - 1936445 - g 73 -5.5 -4.67755 | AGATTGATGGAAAAA CGTTTGC TTCA GCAAGCG CCCAGTCACTAAATA BPUM_1868 1935113 - 1936474 + | multidrug efflux protein TERM 2958 1936523 - 1936478 - T 85 -11.4 -3.46647 | opp_overlap 1936490, overlap 1936490 CCCAGTCACTAAATA CAACACAAAAAAGCAGCTGA TCGATG TCAGCTGCTTTTTTATTTAG TCATTCCATTGGTAT TERM 2959 1936511 - 1936490 - T 100 -10.2 -5.53436 | opp_overlap 1936490, overlap 1936478 ATACAACACAAAAAA GCAGCTGA TCGATG TCAGCTGC TTTTTTATTTAGTCA TERM 2960 1936490 - 1936511 + T 100 -10.9 -5.68438 | opp_overlap 1936478 1936490 ATACAACACAAAAAA GCAGCTGAT CGAT GTCAGCTGC TTTTTTATTTAGTCA BPUM_1869 1937185 - 1936520 - | hypothetical protein TERM 2961 1936977 - 1936996 + g 71 -5 -4.67982 | opp_overlap 1936991, overlap 1936991 ATATCCATTTCTTTG CAGGCATT GATT AATTCCTG TTTTCTTAACTCAGG BPUM_1870 1937554 - 1937204 - | hypothetical protein TERM 2962 1937364 - 1937374 + g 89 -6.8 -5.2853 | overlap 1937356 ATTCCAACACGGTAC GGAC CTT GTCC TTTTATTTTTGCCTG TERM 2963 1937497 - 1937466 - G 90 -11 -3.96068 | gap 1 TGAGCTGAATAAGAA CCAGTCGTCGTTTCA AGA TGA-ACGAAGACTGG GCGATTTAAAAACGA BPUM_1871 1937832 - 1937551 - | hypothetical protein rarD 1938816 - 1937911 - | DMT superfamily drug/metabolite transporter TERM 2964 1938986 - 1938974 - g 70 -2.7 -5.06103 | AGAAGCCTTAAAAAA TTCAG ACC CTAAA GACGTCGAGCAGTAC yozR 1938912 - 1939385 + | hypothetical protein TERM 2965 1939383 - 1939418 + T 83 -4 -5.52023 | opp_overlap 1939389, overlap 1939385 1939389 ATCGATATTCCATTA TAAAAAGCCTGCTTTT GTAT AGAAGCAGGCTTACTC TTTTTTCTTAATAAT TERM 2966 1939385 - 1939416 + T 75 -6.6 -4.39002 | opp_overlap 1939389, overlap 1939383 1939389 CGATATTCCATTATA AAAAGCCTGCTTTT GTAT AGAAGCAGGCTTAC TCTTTTTTCTTAATA TERM 2967 1939389 - 1939412 + T 85 -11.8 -3.7076 | opp_overlap 1939389, overlap 1939385 1939383 ATTCCATTATAAAAA GCCTGCTTTT GTAT AGAAGCAGGC TTACTCTTTTTTCTT TERM 2968 1939412 - 1939389 - T 91 -9.6 -4.91511 | opp_overlap 1939389 1939385 1939383 ATTCCATTATAAAAA GCCTGCTTTT GTAT AGAAGCAGGC TTACTCTTTTTTCTT BPUM_1874 1939644 - 1939426 - | hypothetical protein TERM 2969 1939585 - 1939573 - G 85 -4.1 -5.46698 | GCCAAAACCAAAAAA CAAAG GGA CTCTG GATTCATATGGCGGA TERM 2970 1939706 - 1939732 + r 83 -3.7 -5.52986 | gap 1, opp_overlap 1939702, overlap 1939706 GGAGTCAAAACGTTT GG-GCAAACCTG AAAC TAGGCTTGCTCC TTTTTTTCATGAGAT yodB 1940052 - 1939720 - | transcriptional regulator BPUM_1876 1940192 - 1940809 + | nitroreductase TERM 2971 1940821 - 1940842 + F 100 -13 -6.01187 | opp_overlap 1940814 1940816 TTAAAAAATGGCAAG GCCCCAGC TTTCGT GCTGGGGC TTTTTTTATTTGCTT BPUM_1877 1941046 - 1941249 + | hypothetical protein TERM 2972 1941615 - 1941578 - g 74 -10.5 -2.62653 | opp_overlap 1941578 1941577, overlap 1941577 1941569 TCACAACCTCACAAC GCTTGCTGACTATGCAC GTGA GCGCTTTGACAGCAAGC TGTTATCCAGTCTCA yodF 1941249 - 1942742 + | SSS family solute/sodium (Na+) symporter TERM 2973 1942753 - 1942773 + T 87 -8.3 -4.73682 | opp_overlap 1942753, overlap 1942748 TATGAGATTAAAAAA GCAGTCC CTTATGA GGACTGC TTTTATCTTGTAGAC TERM 2974 1942773 - 1942753 - T 100 -9 -5.23316 | opp_overlap 1942753 1942748 TATGAGATTAAAAAA GCAGTCCC TTATG AGGACTGC TTTTATCTTGTAGAC BPUM_1879 1943735 - 1942821 - | O-methyltransferase TERM 2975 1943769 - 1943796 + r 100 -15.8 -3.54475 | opp_overlap 1943769 TTTAGAACAAAAAAA TAGGATTCTCCT GGCC AGGAGAATCCTA TTATATACTCAAAAA TERM 2976 1943796 - 1943769 - R 100 -15.8 -5.88565 | opp_overlap 1943769 TTTAGAACAAAAAAA TAGGATTCTCCT GGCC AGGAGAATCCTA TTATATACTCAAAAA TERM 2977 1944010 - 1944037 + r 75 -7.8 -4.06491 | gap 1, opp_overlap 1944010 CAAAAAATATAAAAA CCCCA-CTCTACT TAA AGTAAAGGTGGGG TTTATCTACAGTTCG TERM 2978 1944037 - 1944010 - R 100 -10 -5.41787 | gap 1, opp_overlap 1944010 CAAAAAATATAAAAA CCCCAC-TCTACT TAA AGTAAAGGTGGGG TTTATCTACAGTTCG ctpA 1945466 - 1944081 - | peptidase BPUM_1881 1945618 - 1946316 + | hypothetical protein yodI 1946409 - 1946660 + | spore protein YodI TERM 2979 1946702 - 1946673 - T 79 -7.1 -4.66418 | opp_overlap 1946676, overlap 1946676 TAAAAGAAGAATAAA GAAGGCCCCCC GAATAGCT GGGAGGCCTTT TTATTTGATTAAATT TERM 2980 1946676 - 1946699 + T 91 -7.3 -5.38326 | opp_overlap 1946673 1946676 AAGAAGAATAAAGAA GGCCCCCCG AATAGC TGGGAGGCC TTTTTATTTGATTAA TERM 2981 1946699 - 1946676 - T 84 -8.8 -4.37348 | opp_overlap 1946676, overlap 1946673 AAGAAGAATAAAGAA GGCCCCCC GAATAGCT GGGAGGCC TTTTTATTTGATTAA yodJ 1947541 - 1946711 - | serine-type D-Ala-D-Ala carboxypeptidase TERM 2982 1947071 - 1947055 - G 75 -5.1 -4.77036 | CTTCACTATCAAAAA TGACCTT TTG ACGGTCA TAGGAACGATAGCCA TERM 2983 1947604 - 1947573 - R 100 -8.2 -5.40072 | gap 1, opp_overlap 1947576 1947577, overlap 1947577 GCTCTTCTAAAAAAA TAAA-GATGCGCTAC ATC GTAGCACACCCTTTA TAGTATTATAAAACG TERM 2984 1947599 - 1947577 - R 100 -10.6 -5.20328 | opp_overlap 1947577 1947576, overlap 1947573 TTCTAAAAAAATAAA GATGCGCTAC ATC GTAGCACACC CTTTATAGTATTATA deoD 1948305 - 1947610 - | purine-nucleoside phosphorylase TERM 2985 1948403 - 1948380 - R 89 -6.8 -5.42198 | gap 1, overlap 1948382 GCCCAAAAAAGAAAA TACCAGC-TGA AGC TCAAGCTGGCA TCATCAATCATCTAT TERM 2986 1948401 - 1948382 - R 76 -7.2 -4.32882 | gap 1, overlap 1948380 CCAAAAAAGAAAATA CCAGC-TGA AGC TCAAGCTGG CATCATCAATCATCT BPUM_1885 1948736 - 1948419 - | hypothetical protein BPUM_1886 1949399 - 1948791 - | phosphatase yozD 1949618 - 1949448 - | hypothetical protein BPUM_1888 1949639 - 1949872 + | hypothetical protein yodN 1950549 - 1949869 - | hypothetical protein TERM 2987 1950654 - 1950693 + r 83 -6.4 -5.09685 | opp_overlap 1950661, overlap 1950661 CATTTTATTTCTCAT CAAAAAACCGCTTCTCCC ATCT GGAAAAAGCGGTTGTGTG TTATTTTTTTTTGAC TERM 2988 1950686 - 1950661 - R 100 -11.9 -5.14563 | opp_overlap 1950654 1950661 TTTCTCATCAAAAAA CCGCTTCTCCC ATCT GGAAAAAGCGG TTGTGTGTTATTTTT TERM 2989 1950661 - 1950686 + r 72 -7.5 -3.83881 | opp_overlap 1950661, overlap 1950654 TTTCTCATCAAAAAA CCGCTTCTCCC ATCT GGAAAAAGCGG TTGTGTGTTATTTTT yozE 1950918 - 1950694 - | hypothetical protein BPUM_1891 1951278 - 1950997 - | hypothetical protein kamA 1952681 - 1951281 - | lysine 2,3-aminomutase TERM 2990 1952197 - 1952211 + g 70 -2.8 -5.00616 | opp_overlap 1952197 CTAATATATCCAATA GCAG CATCTAA CTGC TTTTTTGGCACGCCC BPUM_1893 1954175 - 1952799 - | transcriptional regulator TERM 2991 1954206 - 1954222 + r 74 -9.4 -3.05522 | opp_overlap 1954206, overlap 1954205 1954195 TTCAGTGCCGAAAAA CCGGCA TCCAT TGCCGG ATTTTCAGCGGCTTG TERM 2992 1954222 - 1954206 - R 88 -9.4 -4.58395 | opp_overlap 1954206 1954205 1954195 TTCAGTGCCGAAAAA CCGGCA TCCAT TGCCGG ATTTTCAGCGGCTTG TERM 2993 1954345 - 1954326 - R 100 -10 -5.42862 | opp_overlap 1954326 1954325 1954328 ATAGCGTCAAAAAAA CACCCCTC TTAT GAGGAGTG CTTTCGCCCTGATGT cgeD 1955629 - 1954334 - | spore maturation protein CgeD TERM 2994 1955318 - 1955340 + g 73 -10 -3.05816 | opp_overlap 1955316 TTTCTGCAAACGATC TTGATGATAC ACG GTATCATCAG TTAAATAACAAATGA cgeC 1955967 - 1955647 - | spore maturation protein CgeC cgeA 1956175 - 1956576 + | spore maturation protein CgeA TERM 2995 1956726 - 1956754 + G 100 -13.3 -4.32034 | opp_overlap 1956731, overlap 1956731 ACCCACTCACATGCA CAAAATCCGGACA TTT TCTCCGGATTTTG TTTTGATGATGATCG TERM 2996 1956749 - 1956731 - g 78 -7.4 -4.45083 | opp_overlap 1956731 1956726 CTCACATGCACAAAA TCCGGACA TTT TCTCCGGA TTTTGTTTTGATGAT TERM 2997 1956731 - 1956749 + G 90 -7.4 -5.14626 | opp_overlap 1956731, overlap 1956726 CTCACATGCACAAAA TCCGGACA TTT TCTCCGGA TTTTGTTTTGATGAT cgeB 1956592 - 1957554 + | spore maturation protein CgeB TERM 2998 1957570 - 1957536 - T 100 -15.8 -2.85078 | opp_overlap 1957539 1957544, overlap 1957544 CAGACTTTATGAAAT CGTAAAAAGCGCCCTA TGA CAGGGCGCTTTTCTCG TTGAAATTCATCTTA TERM 2999 1957539 - 1957567 + T 81 -11.8 -2.75957 | opp_overlap 1957536 1957544, overlap 1957544 ACTTTATGAAATCGT AAAAAGCGCCCT ATGAC AGGGCGCTTTTC TCGTTGAAATTCATC TERM 3000 1957544 - 1957562 + T 100 -11.7 -4.54821 | opp_overlap 1957536 1957544, overlap 1957539 ATGAAATCGTAAAAA GCGCCCT ATGAC AGGGCGC TTTTCTCGTTGAAAT TERM 3001 1957562 - 1957544 - T 100 -12.4 -4.71482 | opp_overlap 1957544 1957539, overlap 1957536 ATGAAATCGTAAAAA GCGCCCTA TGA CAGGGCGC TTTTCTCGTTGAAAT neuA 1958305 - 1957589 - | N-acylneuraminate cytidylyltransferase capD 1958549 - 1959577 + | capsular polysaccharide biosynthesis protein D TERM 3002 1959582 - 1959615 + T 100 -22.7 -4.67353 | opp_overlap 1959582 ATAAAAAATAAAAAA TCGTCACATGGAAGC AGAT GCTTCCATGTGACGA TTTTTCAATAGATCA TERM 3003 1959615 - 1959582 - T 100 -22.7 -6.07374 | opp_overlap 1959582 ATAAAAAATAAAAAA TCGTCACATGGAAGC AGAT GCTTCCATGTGACGA TTTTTCAATAGATCA msrB 1960059 - 1959628 - | methionine sulfoxide reductase B msrA 1960592 - 1960056 - | methionine sulfoxide reductase A BPUM_1902 1960730 - 1961161 + | MarR family transcriptional regulator BPUM_1903 1961216 - 1961476 + | hypothetical protein TERM 3004 1961484 - 1961504 + F 100 -12.6 -5.4251 | CTTCTTAACATGCGG GCCTGACG GAAAA CGTCAGGC TTTTTTCTATGTCCC BPUM_1904 1961597 - 1962262 + | hypothetical protein TERM 3005 1962267 - 1962292 + T 85 -9.8 -4.08394 | opp_overlap 1962258 1962267 AGCAAATATAAAAAA GAGCCTTTTC CATAGA GGAAAGGCTC TTTTACGAGACATCT TERM 3006 1962292 - 1962267 - T 100 -8.4 -5.5762 | gap 1, opp_overlap 1962267, overlap 1962258 AGCAAATATAAAAAA GAGCCTTTTCC ATAGA GGAAA-GGCTC TTTTACGAGACATCT ypmT 1962492 - 1962295 - | hypothetical protein ypmS 1963081 - 1962515 - | hypothetical protein ypmR 1963852 - 1963091 - | lipase TERM 3007 1963222 - 1963250 + g 70 -5.2 -4.46828 | opp_overlap 1963222, overlap 1963224 CTTCCTCAAATAAAT CTGCTACGTTGA TCATT TCAGCGTTGCCG TCTTTTTTTAGTTCT TERM 3008 1963477 - 1963454 - G 77 -8.2 -3.93057 | TTGAAAAGGAGCAAA CGTCAAATTG AGTA CATTTTGACG AACGACATGCATTAA ypmQ 1964512 - 1963922 - | electron transport protein TERM 3009 1964484 - 1964461 - G 82 -8.2 -4.29905 | overlap 1964464 1964480 ATGAGACTAAAAGAA GCACGCTTAT GATC ATAAGCGCAC CAAGTGAGGCTCCCC BPUM_1909 1965379 - 1964537 - | DegV family protein TERM 3010 1965559 - 1965501 - R 80 -2.5 -5.52384 | gap 1, opp_overlap 1965548 GTTGCATGAAAAAAA TCCTTGCCAAGCTGAGC-AGCAGCCATT TCAA AACAGCCGCTCACTCCCTTTGACAAAGA TTCCTTTTTACGCAT ypmP 1965818 - 1965567 - | hypothetical protein ilvA 1967123 - 1965855 - | threonine dehydratase TERM 3011 1966586 - 1966575 - G 75 -2.2 -5.27938 | ACTTGCAAATAAAAA GTGA GGCT CCAC TTCGATATCATTTAA yplP 1967305 - 1968273 + | sigma L dependent transcriptional regulator TERM 3012 1968794 - 1968806 + G 75 -5.5 -4.78848 | CGGTCTATTGTATTC GGTCG GAA CGATC TTTTATATTTGGCGG BPUM_1913 1968288 - 1968926 + | hemolysin III TERM 3013 1968955 - 1968933 - T 100 -14.2 -5.52384 | opp_overlap 1968933 GCTGCATGAAAAAAA CCAGCATCCA CTT CGGATGCTGG TTTTTCTATGCCCGC TERM 3014 1968933 - 1968955 + T 100 -13.5 -4.96848 | opp_overlap 1968933 GCTGCATGAAAAAAA CCAGCATCC ACTTC GGATGCTGG TTTTTCTATGCCCGC ypkP 1969584 - 1968961 - | hypothetical protein dfrA 1970089 - 1969604 - | dihydrofolate reductase thyB 1970880 - 1970086 - | thymidylate synthase TERM 3015 1970974 - 1970950 - R 95 -5.7 -5.72207 | opp_overlap 1970944 TTTAAACCAAAAAAA CACGCCTGC ATGAGGA GCAGACATG TTTTTCTTTTTATAC BPUM_1917 1971523 - 1970984 - | phosphatidylglycerophosphatase A TERM 3016 1971407 - 1971441 + g 73 -7.2 -4.18762 | TGGATGATATTTTTC TTGAAGCTTTAGCACA ATG TGTGCAATATCTTCAA TTTTCACTCCACGTT TERM 3017 1971539 - 1971557 + r 79 -6.6 -4.84359 | CTCCTTCTAGTGGCT CATCCAGC TCG GCGGGGTG TTTTTGTCCCAGTAA ypjP 1972147 - 1971530 - | hypothetical protein BPUM_1919 1972301 - 1972375 + | hypothetical protein TERM 3018 1972377 - 1972391 + T 86 -10 -4.24123 | opp_overlap 1972377 AGATTACGGATTAAA GCCCTT AGT AAGGGC TTTTCAGATTGTTGA TERM 3019 1972391 - 1972377 - T 81 -10 -3.77464 | opp_overlap 1972377 AGATTACGGATTAAA GCCCTT AGT AAGGGC TTTTCAGATTGTTGA TERM 3020 1972405 - 1972443 + T 100 -17.8 -4.18506 | opp_overlap 1972411, overlap 1972411 GCTTTTCAGATTGTT GACAAAGTGCTAAAATGA TCT TGATTTTAGCACTTTGTC TTCTTTTCAGCGTGA TERM 3021 1972437 - 1972411 - T 81 -9.6 -3.87373 | opp_overlap 1972411 1972405 CAGATTGTTGACAAA GTGCTAAAATGA TCT TGATTTTAGCAC TTTGTCTTCTTTTCA TERM 3022 1972411 - 1972437 + T 86 -9.6 -4.45253 | opp_overlap 1972411, overlap 1972405 CAGATTGTTGACAAA GTGCTAAAATGA TCT TGATTTTAGCAC TTTGTCTTCTTTTCA TERM 3023 1972589 - 1972575 - T 80 -10 -3.56643 | opp_overlap 1972575 TCTACACGCTGTAAA GCCCTT AGT AAGGGC TTTTTTCTTTCTCGA TERM 3024 1972575 - 1972589 + T 100 -10 -5.72622 | opp_overlap 1972575 TCTACACGCTGTAAA GCCCTT AGT AAGGGC TTTTTTCTTTCTCGA ypiP 1973367 - 1972579 - | hypothetical protein TERM 3025 1973419 - 1973397 - R 89 -6.3 -5.52023 | opp_overlap 1973397 ATGATCAAGAAAAAA TGCCCTG ATCTGATCG CAGGGCA TTTCAACACGTGTAT yphP 1973868 - 1973434 - | hypothetical protein ilvD 1975626 - 1973950 - | dihydroxy-acid dehydratase TERM 3026 1974499 - 1974489 - G 75 -8.2 -3.81488 | opp_overlap 1974486 GGTTTCCAAATAGAA CGGC TAA GCCG CCCTTTTCAGTAAAT TERM 3027 1974612 - 1974624 + g 71 -3.4 -5.03145 | opp_overlap 1974612 TCATTGTATCTAAAT GAAG TGCGC CTTC TTTTTTGGACAATTC TERM 3028 1975052 - 1975071 + g 70 -7.8 -3.58914 | opp_overlap 1975048, overlap 1975058 CCTGAACAAGATCCG CAGGTCGG ACAG CCGAACTG TTCTAATTCATTTAA TERM 3029 1975855 - 1975868 + r 70 -2.5 -5.03994 | opp_overlap 1975855, overlap 1975855 CAATATTCAAAATAA TTTTT CTAA AAAAA TTTTTCTGTCTACGA TERM 3030 1975920 - 1975896 - R 91 -9.3 -5.08601 | opp_overlap 1975896 1975899 CGACTTTAAGAAAAA CAAGCTACCAA TGA TAGGCAGCTTG TTCATAAGTCTCATC ypgR 1977070 - 1975934 - | hypothetical protein TERM 3031 1976132 - 1976116 - G 72 -8 -3.88703 | CTTCATAAAGAAACA TCGCTG CACGC CAGCGA ACAAGTTTACTTGGA ypgQ 1977712 - 1977101 - | HD family metal dependent phosphohydrolase TERM 3032 1977676 - 1977700 + g 82 -5 -5.28176 | gap 1, opp_overlap 1977680, overlap 1977679 1977680 TCAGCCGATCCGAAA CAA-AGGAGGC AGCT GCCTCCAATTG TTTTTTCTGCATGAC TERM 3033 1977680 - 1977695 + g 74 -10.4 -2.64257 | opp_overlap 1977680, overlap 1977679 1977676 CCGATCCGAAACAAA GGAGGC AGCT GCCTCC AATTGTTTTTTCTGC TERM 3034 1977695 - 1977680 - G 100 -10.4 -4.44046 | opp_overlap 1977680 1977679 1977676 CCGATCCGAAACAAA GGAGGC AGCT GCCTCC AATTGTTTTTTCTGC bsaA 1978208 - 1977726 - | glutathione peroxidase TERM 3035 1977829 - 1977845 + g 70 -8.1 -3.73042 | overlap 1977827 TCCACGATAAATTTT GTGAAAT TCC ATTTCAC TGTTTTCGTCCCAAG fhs 1979965 - 1978283 - | formate--tetrahydrofolate ligase TERM 3036 1979679 - 1979689 + g 78 -5.4 -5.08011 | GAAGGCTCTCGCATT GCAA TGA TTGC TTTTTTCCCAATTTT metA 1980103 - 1981011 + | homoserine O-succinyltransferase ugtP 1981240 - 1982391 + | diacylglycerol glucosyltransferase TERM 3037 1982395 - 1982417 + T 100 -17.8 -5.4182 | opp_overlap 1982395 GCATTATCATAAAAA GGTGTCCGTC AAT GACGGACACC TTTTTCTTTATCCTT TERM 3038 1982417 - 1982395 - T 100 -17.8 -4.93296 | opp_overlap 1982395 GCATTATCATAAAAA GGTGTCCGTC AAT GACGGACACC TTTTTCTTTATCCTT BPUM_1929 1983126 - 1982425 - | hypothetical protein cspD 1983385 - 1983585 + | cold shock protein TERM 3039 1983630 - 1983613 - T 91 -11.3 -4.6951 | opp_overlap 1983613 ATGATGCAAAATAAA GAGAGGC TTAT GCCTCTC TTATTTGATTTTCAG TERM 3040 1983613 - 1983630 + T 88 -11.3 -4.21465 | opp_overlap 1983613 ATGATGCAAAATAAA GAGAGGC TTAT GCCTCTC TTATTTGATTTTCAG degR 1983813 - 1983631 - | regulatory protein DegR TERM 3041 1983931 - 1983952 + r 70 -8.1 -3.34398 | overlap 1983929 TTTTTACACATTCTA TCCGTTTTT TTTC AAGAACGGA TGTTTGAGAAGGGAA ypeQ 1984165 - 1983983 - | hypothetical protein ypeP 1984838 - 1984167 - | hypothetical protein ypdP 1984933 - 1985622 + | hypothetical protein TERM 3042 1985917 - 1985931 + G 77 -3.6 -5.20735 | AGAGATGATCGAGCT TCAAAG CAA TTTTGA TTTATTTTTTATTAA rnhA 1985624 - 1986019 + | ribonuclease H TERM 3043 1986024 - 1985996 - f 90 -11.2 -4.3739 | gap 1, opp_overlap 1985996, overlap 1985980 CAGCTCGCTAGAAAA GCGATTCA-CCTT TCTA AAGGATGAATCGC TTTTTTTCGGTTATG TERM 3044 1985996 - 1986024 + F 100 -11.2 -5.55698 | gap 1, opp_overlap 1985980 1985996 CAGCTCGCTAGAAAA GCGATTCA-CCTT TCTA AAGGATGAATCGC TTTTTTTCGGTTATG sspL 1986064 - 1986189 + | small acid-soluble spore protein L TERM 3045 1986194 - 1986219 + T 75 -8.3 -3.81755 | opp_overlap 1986196, overlap 1986196 CAAAAAGATAAACCT AAGAGATCGGC TTTA GCTGATCTCTC TTATATTTAAGCGGT TERM 3046 1986196 - 1986217 + T 83 -10.9 -3.49232 | opp_overlap 1986196, overlap 1986194 AAAAGATAAACCTAA GAGATCGGC TTTA GCTGATCTC TCTTATATTTAAGCG TERM 3047 1986217 - 1986196 - T 74 -8.7 -3.40392 | opp_overlap 1986196 1986194 AAAAGATAAACCTAA GAGATCGGC TTTA GCTGATCTC TCTTATATTTAAGCG ypcP 1987093 - 1986206 - | 5'-3' exonuclease TERM 3048 1987160 - 1987197 + r 76 -7.2 -4.20136 | opp_overlap 1987162, overlap 1987162 AAACTAGACATAAAA AAGGC-GCCTTCTTCTTT TGGA AAAGAAG-AGGCAGCCTG TTTACTTTTGACCGT TERM 3049 1987195 - 1987162 - R 100 -9.8 -5.43414 | opp_overlap 1987162 1987160 ACTAGACATAAAAAA GGC-GCCTTCTTCTTT TGGA AAAGAAG-AGGCAGCC TGTTTACTTTTGACC TERM 3050 1987162 - 1987195 + r 80 -9.8 -3.695 | opp_overlap 1987162, overlap 1987160 ACTAGACATAAAAAA GGC-GCCTTCTTCTTT TGGA AAAGAAG-AGGCAGCC TGTTTACTTTTGACC TERM 3051 1987245 - 1987255 + r 75 -3.2 -5.28942 | TCTGCTTCTGCATAG GACG GCA TGTC TTTTTGTTTAGGGTC ypbS 1987631 - 1987368 - | hypothetical protein BPUM_1939 1991272 - 1987673 - | hypothetical protein TERM 3052 1987747 - 1987773 + g 71 -3 -5.06961 | overlap 1987737 CCGCCTGCTCTTTAG CATCTGTCGTGA GGC TCGTGATAAATG TTTGTTTTTGTTCAT TERM 3053 1990496 - 1990510 + g 82 -5 -5.26875 | GGCCTTGGGCAATGT CTGTAA TTC TTGCAG TTTTTTGATTAAACA TERM 3054 1990611 - 1990622 + g 71 -3 -4.98436 | TCTTTAAGGAGCATG TCAA TCAC TTGA TTTTTGTAATCTTCA TERM 3055 1991373 - 1991416 + r 74 -4.7 -5.00616 | gap 2, opp_overlap 1991373 GAGGAAATAAAAAAA TCTGCTACCCGA-TC-AGTCG CAAT TGACTGGAATCAGGAAGCAGA TTTTTTGGAGACACC TERM 3056 1991416 - 1991373 - R 100 -6.2 -5.99154 | gap 2, opp_overlap 1991373 GAGGAAATAAAAAAA TCTGCTACCCGA-T-CAGTC GCAATT GACTGGAATCAGGAAGCAGA TTTTTTGGAGACACC ypbQ 1992086 - 1991577 - | isoprenylcysteine carboxyl methyltransferase bcsA 1993183 - 1992083 - | naringenin-chalcone synthase TERM 3057 1993351 - 1993380 + H 84 -4.3 -5.60993 | overlap 1993352 TAGTTTTCCTCCTTC ACAGGTTCGTT CCAAGCCA AGCGAACCTGC TTTTTTTATGCAAAA TERM 3058 1993352 - 1993379 + H 74 -7.8 -3.95873 | overlap 1993351 AGTTTTCCTCCTTCA CAGGTTCGTT CCAAGCCA AGCGAACCTG CTTTTTTTATGCAAA TERM 3059 1993417 - 1993399 - H 83 -5.3 -5.47218 | overlap 1993402 TTTTATGCAAAAAAA CACCTCT AAAAG AGAAGTG TTCAGACCGTAAGGC yheN2 1993753 - 1994556 + | polysaccharide deacetylase TERM 3060 1994603 - 1994569 - T 74 -10 -2.73468 | opp_overlap 1994575, overlap 1994575 TAATAGTGCTAATCA CAAAAAGCCCGTATCC AAA AGATGCGGGCTTTCAG CTTGTAGACAAATCC TERM 3061 1994597 - 1994575 - T 93 -9.8 -4.98255 | opp_overlap 1994575, overlap 1994569 TGCTAATCACAAAAA GCCCGTATCC AAA AGATGCGGGC TTTCAGCTTGTAGAC TERM 3062 1994575 - 1994597 + T 83 -11.3 -3.69354 | opp_overlap 1994569 1994575 TGCTAATCACAAAAA GCCCGTATC CAAAA GATGCGGGC TTTCAGCTTGTAGAC TERM 3063 1994720 - 1994675 - T 91 -10.7 -4.7629 | opp_overlap 1994676 1994684, overlap 1994678 1994684 TTATCAAGCTAAAAA GAAGACAAAGAGCTAAAATAA AAGG TCATTTTAGCTCTTTGTCCAT AATCTGAACCCCTTC TERM 3064 1994676 - 1994719 + T 74 -9.8 -2.62515 | opp_overlap 1994675 1994678 1994684, overlap 1994684 TATCAAGCTAAAAAG AAGACAAAGAGCTAAAATAA AAGG TCATTTTAGCTCTTTGTCCA TAATCTGAACCCCTT TERM 3065 1994717 - 1994678 - T 100 -19 -4.47888 | opp_overlap 1994676 1994684, overlap 1994675 1994684 TCAAGCTAAAAAGAA GACAAAGAGCTAAAATAA AAGG TCATTTTAGCTCTTTGTC CATAATCTGAACCCC TERM 3066 1994711 - 1994684 - T 90 -10.8 -4.48869 | opp_overlap 1994676 1994684, overlap 1994678 1994675 TAAAAAGAAGACAAA GAGCTAAAATAA AAGG TCATTTTAGCTC TTTGTCCATAATCTG TERM 3067 1994684 - 1994711 + T 79 -8.6 -3.94409 | opp_overlap 1994684 1994678 1994675, overlap 1994676 TAAAAAGAAGACAAA GAGCTAAAATAA AAGG TCATTTTAGCTC TTTGTCCATAATCTG TERM 3068 1994730 - 1994746 + T 74 -8.7 -3.65199 | opp_overlap 1994723 GTCCATAATCTGAAC CCCTTCT CCA AGAGGGG TTTACATAACAGATT pbuX 1996067 - 1994748 - | NCS2 family uracil:xanthine symporter-2 TERM 3069 1996034 - 1996049 + g 78 -5.4 -5.00884 | CATGCTGAATCCCTA GCGAGA GTGT TTTCGC TTTTTTAGCAGCACT xpt 1996648 - 1996064 - | xanthine phosphoribosyltransferase TERM 3070 1996730 - 1996701 - R 90 -6.6 -5.60993 | gap 2 TTTCGCATAAAAAAA GCATTGCT-G-TCC ATGA GGAGCAAGCAATGC GAAAACGATCCACGG TERM 3071 1996970 - 1996996 + r 72 -5.8 -4.41348 | opp_overlap 1996964 1996972, overlap 1996971 1996972 ATTCAAGCATCAAAA AAGCACCCTTTT GAG GAAAGGGTGCCA TTTATTTAAGACAAA TERM 3072 1996971 - 1996995 + r 75 -9.3 -3.24488 | opp_overlap 1996964 1996972, overlap 1996970 1996972 TTCAAGCATCAAAAA AGCACCCTTTT GAG GAAAGGGTGCC ATTTATTTAAGACAA TERM 3073 1996972 - 1996994 + r 89 -12.8 -2.54371 | opp_overlap 1996964 1996972, overlap 1996971 1996970 TCAAGCATCAAAAAA GCACCCTTTT GAG GAAAGGGTGC CATTTATTTAAGACA TERM 3074 1996994 - 1996972 - R 100 -12.1 -5.2189 | opp_overlap 1996972 1996971 1996970, overlap 1996964 TCAAGCATCAAAAAA GCACCCTTT TGAGG AAAGGGTGC CATTTATTTAAGACA ypwA 1998507 - 1997002 - | M32 family carboxypeptidase TERM 3075 1998042 - 1998053 + g 75 -2.2 -5.40072 | AGTTATTGAGCAGCA CATC ATAT GGTG TTTTTTTCACGCCCC TERM 3076 1998377 - 1998392 + g 75 -2.4 -5.40474 | opp_overlap 1998387, overlap 1998387 1998388 TGTCCGATCGTTTCA GCTCTG AAAT CGGCGC TTTTTTTAGGCGCCT TERM 3077 1998583 - 1998615 + r 70 -4.9 -4.60073 | opp_overlap 1998587, overlap 1998585 1998587 TTCTTTTGTCAATGA AAAAGGAGGATAC GCAGATG GTATCCTCCTCTC TTTTCTCGTTATATA TERM 3078 1998585 - 1998613 + r 74 -7.5 -3.89837 | opp_overlap 1998587, overlap 1998583 1998587 CTTTTGTCAATGAAA AAGGAGGATAC GCAGATG GTATCCTCCTC TCTTTTCTCGTTATA TERM 3079 1998587 - 1998611 + r 79 -10.1 -3.51909 | opp_overlap 1998587, overlap 1998585 1998583 TTTGTCAATGAAAAA GGAGGATAC GCAGATG GTATCCTCC TCTCTTTTCTCGTTA TERM 3080 1998611 - 1998587 - R 93 -10.1 -4.8622 | opp_overlap 1998587 1998585 1998583 TTTGTCAATGAAAAA GGAGGATAC GCAGATG GTATCCTCC TCTCTTTTCTCGTTA ypvA 2000572 - 1998635 - | ATP-dependent helicase TERM 3081 1999106 - 1999090 - G 73 -5.1 -4.72631 | ATGAAGGGAACAAAA TGAGAGA CCG TCCCCCA TTATCTTTCAGCTGA TERM 3082 2000792 - 2000808 + G 80 -6.5 -4.75174 | CCTTTCATTTCTTGA GCAGTCG AAT CGAGTGC TTTTTGGATTAACTG BPUM_1947 2000634 - 2000846 + | hypothetical protein TERM 3083 2000979 - 2001013 + T 100 -15.2 -4.17878 | opp_overlap 2000981 2000986, overlap 2000982 CAAAACACCTTTATA CAGCCAATTGCCGATA GTT TATCGGTGATTGGTTG TTTAGTTTCGTTTGA TERM 3084 2000982 - 2001010 + T 100 -13.3 -4.17906 | opp_overlap 2000981 2000986, overlap 2000979 AACACCTTTATACAG CCAATTGCCGATA GTT TATCGGTGATTGG TTGTTTAGTTTCGTT BPUM_1948 2001774 - 2000974 - | integrase TERM 3085 2001157 - 2001204 + g 74 -6.3 -4.52589 | gap 1 AAACGATTCGATGGA GGCATTATCA-GCGGGCGTCCC TTTAC GGGACATGCTCATGGTAATGCC TTTTATATGAACAGC BPUM_1949 2002124 - 2001792 - | transposase TERM 3086 2002152 - 2002166 + r 72 -5.7 -4.62471 | TCCATGTTTTATTTC GGATC ACAAC GATCC TTTTTCAAACTTGAA BPUM_1950 2003394 - 2002240 - | site-specific DNA-methyltransferase (adenine-specific) TERM 3087 2003442 - 2003468 + r 77 -6 -4.73614 | gap 1, opp_overlap 2003442 TATTCCAAGATAAAA GCTCTCCATAT GTTGAA ATA-GGAGAGC TTTGTTTTCATCATG TERM 3088 2003468 - 2003442 - R 74 -6 -4.67608 | gap 1, opp_overlap 2003442 TATTCCAAGATAAAA GCTCTCCATAT GTTGAA ATA-GGAGAGC TTTGTTTTCATCATG ypsB 2004254 - 2003949 - | hypothetical protein ypsA 2004944 - 2004312 - | hypothetical protein TERM 3089 2004352 - 2004342 - G 88 -6.8 -5.14563 | CTTTTCATCAAAAAA CGGA TCT TCCG CCTCAACTTGCGCTC TERM 3090 2004482 - 2004504 + g 73 -5.7 -4.5493 | GAGCGAGGAGTCCAT CTGTTTTTT CAATA AAAAAACGG TTCTTTTGTTTAAAT TERM 3091 2004913 - 2004896 - G 100 -9.9 -5.40072 | CTGCTTTTAAAAAAA GGGACTT ATAA AAGTCCC ATTCCACTTTATCTG TERM 3092 2005459 - 2005485 + r 72 -8 -3.72576 | overlap 2005460 2005482 2005484 CATGTTTTGCGCTTT CCCGGGCAATAA TGT TTATTGCCCAGC TTTCCTCAAAAGCCG TERM 3093 2005460 - 2005484 + r 81 -11.5 -2.83403 | overlap 2005459 2005482 ATGTTTTGCGCTTTC CCGGGCAATAA TGT TTATTGCCCAG CTTTCCTCAAAAGCC TERM 3094 2005482 - 2005500 + r 81 -3.1 -5.61824 | overlap 2005460 2005459 2005484 ATAATGTTTATTGCC CAGCTTT CCTCA AAAGCCG TTTTTTTCGCTTTTC yprB 2006721 - 2005474 - | hypothetical protein TERM 3095 2006336 - 2006323 - G 74 -6.7 -4.3739 | CACTTTGTCAGAAAA GACAC GTGC GTGTC CAAGCAAGAAGATCA yprA 2008991 - 2006745 - | ATP-dependent helicase yqiG 2009236 - 2010270 + | FMN reductase TERM 3096 2010285 - 2010306 + T 100 -3 -6.35605 | opp_overlap 2010285 ATGTCATCAAAAAAA CTACCC TCATACATTT GGGTAG TTTTTTTTTCTATTA TERM 3097 2010306 - 2010285 - T 80 -3 -5.52986 | opp_overlap 2010285 ATGTCATCAAAAAAA CTACCC TCATACATTT GGGTAG TTTTTTTTTCTATTA ypqE 2010825 - 2010319 - | PTS family glucose/sucrose porter component IIA BPUM_1957 2010994 - 2011413 + | hypothetical protein TERM 3098 2011428 - 2011405 - T 73 -8.2 -3.64541 | opp_overlap 2011406, overlap 2011403 2011406 GCACCAAAGCAAAGA GCCCAATAGA TCCT TCTATTGGGT TTTCACTATGCTTTA TERM 3099 2011406 - 2011427 + T 93 -11.7 -4.26622 | opp_overlap 2011405 2011403 2011406 CACCAAAGCAAAGAG CCCAATAGA TCCT TCTATTGGG TTTTCACTATGCTTT TERM 3100 2011427 - 2011406 - T 81 -11.7 -2.78002 | opp_overlap 2011406, overlap 2011405 2011403 CACCAAAGCAAAGAG CCCAATAGA TCCT TCTATTGGG TTTTCACTATGCTTT yppG 2011886 - 2011434 - | hypothetical protein TERM 3101 2011532 - 2011546 + g 85 -4.3 -5.53288 | opp_overlap 2011532 ACATTTTGTTAAAAT CGAAT TGTCC ATTCG TTTTTTTGAATTGCG TERM 3102 2012001 - 2011980 - R 84 -5.8 -5.31855 | opp_overlap 2011980 CAGCAATAAGAAAAA CGCAGCCA TATCTT CAGCTGCG CTTGTTAATTTCTTC yppE 2012364 - 2011993 - | hypothetical protein BPUM_1960 2012436 - 2012756 + | hypothetical protein sspM 2012852 - 2012956 + | small acid-soluble spore protein M TERM 3103 2012955 - 2012981 + T 75 -8.1 -3.86015 | opp_overlap 2012961, overlap 2012961 ATCGACCATCTACGT AAAAAAGCAGG TACCC CCTGCTTTTTA TTTATGCAAAAAATA TERM 3104 2012975 - 2012961 - T 85 -7.1 -5.09895 | opp_overlap 2012961 2012955 CATCTACGTAAAAAA GCAGG TACCC CCTGC TTTTTATTTATGCAA TERM 3105 2012961 - 2012975 + T 91 -7.1 -5.38054 | opp_overlap 2012961, overlap 2012955 CATCTACGTAAAAAA GCAGG TACCC CCTGC TTTTTATTTATGCAA yppC 2013935 - 2012979 - | hypothetical protein recU 2013982 - 2014599 + | Holliday junction-specific endonuclease TERM 3106 2014734 - 2014747 + G 73 -2.5 -5.22289 | overlap 2014738 AAAAGAAAGCAGGTC TATTT AAAA AAATA TTTTTATCTTTACTC TERM 3107 2015865 - 2015852 - g 85 -2.4 -5.80951 | ATTGAAAACAAAAAA TGGT CAACGT ACCA GCAAATTGATGATGC TERM 3108 2016630 - 2016620 - g 73 -5.4 -4.58395 | overlap 2016623 GCGACGGTTGAAAAA GGAT CGG ATCC AGCGAAATTAGCCGG ponA 2014637 - 2017348 + | penicillin-binding proteins 1A and 1B TERM 3109 2017356 - 2017378 + T 100 -13.5 -5.08011 | opp_overlap 2017356, overlap 2017370 ATGAATAATGAAAAA GCACTTGCC TCTGT GGCAAGTGC TTTTTTAACGCTTTT TERM 3110 2017378 - 2017356 - T 100 -13.5 -5.00339 | opp_overlap 2017356 2017370 ATGAATAATGAAAAA GCACTTGCC TCTGT GGCAAGTGC TTTTTTAACGCTTTT ypoC 2017892 - 2017383 - | hypothetical protein nth 2018551 - 2017889 - | DNA-(apurinic or apyrimidinic site) lyase dnaD 2019273 - 2018569 - | DNA replication protein DnaD TERM 3111 2019361 - 2019343 - R 89 -10.3 -4.61527 | opp_overlap 2019343 AAAACGTTTGAAAAA GCCTCCA TATGT TGGAGGC TTTCACGTCTTAAGG TERM 3112 2019343 - 2019361 + r 81 -10.3 -3.66803 | opp_overlap 2019343 AAAACGTTTGAAAAA GCCTCCA TATGT TGGAGGC TTTCACGTCTTAAGG asnS 2020729 - 2019371 - | asparaginyl-tRNA synthetase TERM 3113 2020688 - 2020716 + g 80 -4.5 -5.19261 | opp_overlap 2020688, overlap 2020694 CTCCAAAGCCAGAAA GAAGCTCACCTTT TCG ATAGGTGTGATTC TTTTTTCATACATTT ypmB 2021264 - 2020779 - | hypothetical protein TERM 3114 2021283 - 2021303 + r 70 -6.9 -3.75465 | AAGCTTCCCCTATGT GCGATATAT TGT AAATATCGC TTGATTTTGATCTTC ypmA 2021447 - 2021277 - | hypothetical protein TERM 3115 2021569 - 2021598 + r 74 -8.6 -3.66286 | opp_overlap 2021574 2021575, overlap 2021575 CCAAACCCACACCAG CTAAAGGCCGCT TATGAC AGCGGCTTTTCG TTGTTGAGCTCCTCT TERM 3116 2021575 - 2021592 + r 86 -8.4 -4.56133 | opp_overlap 2021574 2021575, overlap 2021569 CCACACCAGCTAAAG GCCGCT TATGAC AGCGGC TTTTCGTTGTTGAGC dinG 2024372 - 2021580 - | bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon TERM 3117 2022397 - 2022378 - G 77 -3.5 -5.24129 | overlap 2022356 2022392 TTTGTTCATAAAAAA GCGATCT GCTAAA AGCTCGC CAGTATCTAGCGGCT TERM 3118 2022614 - 2022627 + g 71 -6.7 -4.08064 | opp_overlap 2022626 GAAGCTCGCTTTTTT GCTGT TCAT ACAGC TTTTCACAAGCAATT TERM 3119 2023943 - 2023901 - G 71 -9.1 -3.28405 | opp_overlap 2023916 2023931 ATAACATAGCAGTAA CTTCCGCATCACTATCCGC CCTGT GCGGGTGGTCATGTGGAAG CATGAGCTCTTCGCT TERM 3120 2024474 - 2024433 - R 75 -9.7 -2.93708 | opp_overlap 2024439 2024467, overlap 2024432 2024439 TCTGGGCAAAAATAG CTGAAACAGAACAGCTT CTTTTCTT AAACTGTTCTGTTTCAT TGGAGCATGCGTTAT TERM 3121 2024468 - 2024439 - R 70 -7.3 -3.73294 | opp_overlap 2024439 2024467, overlap 2024433 2024432 CAAAAATAGCTGAAA CAGAACAGCTT CTTTTCTT AAACTGTTCTG TTTCATTGGAGCATG panD 2024869 - 2024486 - | aspartate alpha-decarboxylase TERM 3122 2024646 - 2024673 + g 76 -2.6 -5.27335 | TGAACCAATCTTGCT GCTGCGCCATTT AGAC AAATGACCCCGC TTTTTCTTTCACCCG panC 2025728 - 2024862 - | pantoate--beta-alanine ligase TERM 3123 2025276 - 2025300 + g 70 -5.8 -4.2704 | overlap 2025260 2025258 2025257 CACAGCGACTTGCTG TGCATCCTTT AGACC AAAGTATGCA TTTGTTGGTGCTACA TERM 3124 2025358 - 2025368 + g 71 -3.2 -5.02074 | ACAACGCCGTCGAAA TGTC CCG GACG TTTTTTCCCGCATAA panB 2026564 - 2025725 - | 3-methyl-2-oxobutanoate hydroxymethyltransferase TERM 3125 2026784 - 2026796 + r 73 -4.1 -5.10497 | GACTTGATCTCGATG TCTGC GGA GTAGA TTTTTTGGATCCCTT birA 2027745 - 2026762 - | bifunctional transcriptional regulator/biotin--[acetyl-CoA-carboxylase] ligase cca 2028920 - 2027718 - | tRNA CCA-pyrophosphorylase BPUM_1977 2030058 - 2028913 - | glycosyltransferase TERM 3126 2029543 - 2029555 + g 78 -4.1 -5.16151 | ATCGACAAAATTATG GATTG TTT CGATC TTTTTATTCGGTTTG ypjG 2030765 - 2030061 - | hypothetical protein TERM 3127 2030581 - 2030591 + g 87 -8.2 -4.49337 | opp_overlap 2030580, overlap 2030579 GACACGCCTAAAATG GCGG CAG CCGC TTTTGCTTCCTCTTG mgsA 2031171 - 2030752 - | methylglyoxal synthase TERM 3128 2030917 - 2030883 - G 70 -7.9 -3.66139 | gap 1 TATACACATCGCAAA GCCGAATGAGTGCAGA TACA TCTGG-CTCATGCGGC TGCGCGGTAAGCGGG dapB 2031992 - 2031189 - | dihydrodipicolinate reductase TERM 3129 2031705 - 2031684 - G 75 -7.3 -4.3898 | ATCAGCTTCAGAAAA TCCAGTGGT TCCG ACGACTGGA CGTACGCCATGTTCA ypjD 2032333 - 2031998 - | pyrophosphatase TERM 3130 2032299 - 2032317 + g 80 -3.8 -5.30155 | overlap 2032300 TAATCATCTACTTCT TGCTGC ACGTAAC GCAGCG TTTTTTCATTCGTCA ypjC 2032471 - 2033343 + | hypothetical protein TERM 3131 2033349 - 2033369 + T 85 -6.2 -5.42265 | gap 1, opp_overlap 2033349 TCCGCATTAAAAAAA GAAGC-CCA AAAA TGGTGCTTC TTTTTTATGATTTCG TERM 3132 2033369 - 2033349 - T 89 -6.2 -5.52384 | gap 1, opp_overlap 2033349 TCCGCATTAAAAAAA GAAGC-CCA AAAA TGGTGCTTC TTTTTTATGATTTCG ypjB 2034177 - 2033374 - | sporulation protein YpjB TERM 3133 2033509 - 2033487 - G 74 -7.8 -4.07568 | opp_overlap 2033501, overlap 2033501 TTCCTGTTGTTAAAA TGACCCAT AAAAGCG ATGGGTCA GCCTCATCTTGATCC TERM 3134 2034155 - 2034145 - G 76 -2.6 -5.36965 | TAATACGAGAAAAAA TAAT AGA ATTA TCGCGATTGGCTTTC ypjA 2034800 - 2034243 - | hypothetical protein TERM 3135 2034901 - 2034865 - R 87 -8.1 -4.69053 | opp_overlap 2034868 2034876, overlap 2034866 2034868 2034876 CACGATCTAATAAAA TCAGAAAAAAAGCTGAC AGC GCCAGCTTTTTCTCTTT TGAGTATATCCTTGT TERM 3136 2034900 - 2034866 - R 85 -11.6 -3.40709 | opp_overlap 2034868 2034876, overlap 2034865 2034868 2034876 ACGATCTAATAAAAT CAGAAAAAAAGCTGAC AGC GCCAGCTTTTTCTCTT TTGAGTATATCCTTG TERM 3137 2034868 - 2034898 + r 86 -9.8 -4.26589 | opp_overlap 2034866 2034865 2034868 2034876, overlap 2034876 GATCTAATAAAATCA GAAAAAAAGCTGAC AGC GCCAGCTTTTTCTC TTTTGAGTATATCCT TERM 3138 2034898 - 2034868 - R 100 -14.2 -3.26609 | opp_overlap 2034868 2034876, overlap 2034866 2034865 2034876 GATCTAATAAAATCA GAAAAAAAGCTGAC AGC GCCAGCTTTTTCTC TTTTGAGTATATCCT TERM 3139 2034890 - 2034876 - R 100 -7.8 -5.77632 | opp_overlap 2034876 2034868, overlap 2034868 2034866 2034865 AAAATCAGAAAAAAA GCTGAC AGC GCCAGC TTTTTCTCTTTTGAG TERM 3140 2034876 - 2034890 + r 81 -5.6 -5.28983 | opp_overlap 2034868 2034866 2034865 2034876, overlap 2034868 AAAATCAGAAAAAAA GCTGAC AGC GCCAGC TTTTTCTCTTTTGAG qcrC 2035705 - 2034938 - | menaquinol:cytochrome c dehydrogenase cytochrome b/c subunit qcrB 2036422 - 2035748 - | cytochrome b6 qcrA 2036931 - 2036425 - | menaquinol:cytochrome c dehydrogenase iron-sulfur subunit ypiF 2037522 - 2037076 - | hypothetical protein TERM 3141 2037205 - 2037193 - G 84 -6.3 -5.06414 | CGGCTTTAATAAAAA TAGTG ATT CACTA ACAGGCTCATGCTCT TERM 3142 2037573 - 2037545 - R 78 -11.1 -2.78384 | opp_overlap 2037545 2037540 2037548, overlap 2037548 CCCTCTTTCATGACA TAAGCCCTGCC TGGATAG GGCAAGGCTTA TGCGTTCAGTTTATG TERM 3143 2037545 - 2037573 + r 71 -9.6 -2.59526 | opp_overlap 2037545 2037548, overlap 2037540 2037548 CCCTCTTTCATGACA TAAGCCCTGCCT GGATA GGGCAAGGCTTA TGCGTTCAGTTTATG TERM 3144 2037570 - 2037548 - R 71 -8.4 -3.54475 | opp_overlap 2037548 2037545 2037540, overlap 2037545 TCTTTCATGACATAA GCCCTGCC TGGATAG GGCAAGGC TTATGCGTTCAGTTT ypiB 2038123 - 2037584 - | hypothetical protein ypiA 2039497 - 2038199 - | hypothetical protein TERM 3145 2038285 - 2038297 + g 78 -5.5 -5.00642 | opp_overlap 2038285 GAACTTTGCGTAATA GAGGC AAT GCTTC TTTTTGTCTGCCTTC TERM 3146 2039748 - 2039767 + r 72 -7.8 -3.82321 | opp_overlap 2039748, overlap 2039746 TTAAGGAAAGAAAAA GCCTGAGG ATAT CCTCAGAC TGTTTTGGTTAAGTA TERM 3147 2039767 - 2039748 - R 100 -10 -5.38326 | opp_overlap 2039748 2039746 TTAAGGAAAGAAAAA GCCTGAGG ATAT CCTCAGAC TGTTTTGGTTAAGTA aroE 2041048 - 2039762 - | 3-phosphoshikimate 1-carboxyvinyltransferase TERM 3148 2040614 - 2040629 + g 70 -7.5 -3.84266 | opp_overlap 2040613 ACCACGAATAGACAG CGGCG TATACT CGCCG TTTGCTCTACCATCT tyrA 2042213 - 2041059 - | prephenate dehydrogenase TERM 3149 2042251 - 2042275 + r 73 -7.2 -4.11281 | opp_overlap 2042251 GTTGTTACAATGAAA GCCATATCCT GTAAA AGGATATGAC TTTATAGTTATGCTA TERM 3150 2042275 - 2042251 - R 81 -9.4 -3.9941 | opp_overlap 2042251 GTTGTTACAATGAAA GCCATATCCT GTAAA AGGATATGAC TTTATAGTTATGCTA hisC 2043385 - 2042288 - | histidinol-phosphate aminotransferase trpA 2044199 - 2043396 - | tryptophan synthase subunit alpha trpB 2045395 - 2044196 - | tryptophan synthase subunit beta TERM 3151 2044242 - 2044281 + g 74 -8 -3.93782 | gap 1, opp_overlap 2044277, overlap 2044243 2044245 2044277 TTCATTAATGTATGC ACATCCTTATCT-CCTCTT CCT GAGAGGCAGACAAGGATGA TTTCATCTTCACTCA TERM 3152 2044243 - 2044280 + g 83 -11.5 -2.95787 | gap 1, opp_overlap 2044277, overlap 2044242 2044245 2044277 TCATTAATGTATGCA CATCCTTATCT-CCTCTT CCT GAGAGGCAGACAAGGATG ATTTCATCTTCACTC trpF 2046035 - 2045376 - | N-(5'-phosphoribosyl)anthranilate isomerase trpC 2046793 - 2046041 - | indole-3-glycerol-phosphate synthase TERM 3153 2046573 - 2046592 + g 74 -6.4 -4.49756 | opp_overlap 2046566 2046573 ACTGATAAGCAATCA GCATTCGA TTTT TCGTATGC TTTTGCTGTTTGCAG trpD 2047808 - 2046786 - | anthranilate phosphoribosyltransferase TERM 3154 2046932 - 2046922 - GR 79 -8.2 -4.12532 | CCTGCGACATATAAA GCCG CTC CGGC ATTCAGCGCTGTAAT trpE 2049327 - 2047780 - | anthranilate synthase component I TERM 3155 2049138 - 2049128 - GR 81 -5.4 -5.09426 | TGTAAGGTTAAAAAA GGAT GTA ATCC GATGAAGGAATATCT TERM 3156 2049427 - 2049401 - R 100 -13.9 -5.23316 | opp_overlap 2049399 GAGTATACGAAAAAA GCCTAAAAGAG GGGTG CTCTTTTAGGC AGTATGATTAAATAG aroH 2049943 - 2049560 - | chorismate mutase aroB 2051031 - 2049940 - | 3-dehydroquinate synthase aroF 2052203 - 2051031 - | chorismate synthase cheR 2053056 - 2052277 - | protein-glutamate O-methyltransferase TERM 3157 2052554 - 2052564 + g 70 -5.4 -4.43221 | opp_overlap 2052554 TTCACAGTGTAAAAT GAAG AAT CTTC TTTTGTGAAATATTT TERM 3158 2053158 - 2053198 + r 82 -8.3 -4.2828 | opp_overlap 2053163, overlap 2053163 AGAAATATTCATATA AAAAAGCCAAGGTGCTCAT TTG ATGAACACCTTGGCTTGAA TTTTAATAAATCCAG TERM 3159 2053193 - 2053163 - R 100 -19.2 -5.38047 | opp_overlap 2053158 2053163 TATTCATATAAAAAA GCCAAGGTGCTCAT TTG ATGAACACCTTGGC TTGAATTTTAATAAA TERM 3160 2053163 - 2053193 + r 100 -17 -3.39521 | opp_overlap 2053163, overlap 2053158 TATTCATATAAAAAA GCCAAGGTGCTCAT TTG ATGAACACCTTGGC TTGAATTTTAATAAA ndk 2053647 - 2053201 - | nucleoside diphosphate kinase TERM 3161 2053352 - 2053372 + g 71 -4.6 -4.65933 | TCTCCTCTTATCGTG CCCGGAAG CGCTT CCTTCGGG TTTGTTTTGCCGATC TERM 3162 2053701 - 2053711 + r 83 -4 -5.626 | opp_overlap 2053701, overlap 2053685 TACATTGTTACAAAG TGAT CGT ATCA TTTTTTTATACAATA TERM 3163 2053781 - 2053759 - R 100 -10 -5.63504 | opp_overlap 2053758 2053751 2053759 AATTTCACAAAAAAA CCAATCAACA ATA TGTTGATTAG AATTTTCGTTTTCCA hepT 2054740 - 2053778 - | heptaprenyl diphosphate synthase component II TERM 3164 2054616 - 2054593 - G 86 -6 -5.25772 | gap 1, overlap 2054581 2054594 2054595 AAAGGAGAACAAAAA CGGGGCGGA TTCGTTT TCCGCC-CG CTTGCAGCAAATGAA TERM 3165 2054615 - 2054595 - G 72 -9.7 -2.82187 | overlap 2054581 2054593 2054594 AGGAGAACAAAAACG GGGCGGA TTCGTTT TCCGCCC GCTTGCAGCAAATGA menH 2055469 - 2054765 - | ubiquinone/menaquinone biosynthesis methyltransferase TERM 3166 2055246 - 2055234 - G 72 -6.3 -4.26344 | ATATTTTTACTAAAA TCAAG GCC CTTGA CTTCACCTTTGTCTC hepS 2056240 - 2055473 - | trans-hexaprenyltranstransferase subunit 1 mtrB 2056555 - 2056355 - | transcription attenuation protein MtrB folE 2057179 - 2056610 - | GTP cyclohydrolase I TERM 3167 2057283 - 2057267 - R 86 -9.5 -4.41616 | overlap 2057263 2057282 AGCGTTCTAAACAAA CCTTTTG ATT CAAAAGG AAAAGCCCCTTATGA TERM 3168 2057311 - 2057282 - R 100 -13.7 -4.18018 | opp_overlap 2057288, overlap 2057267 2057283 2057288 CCTTTTGATTCAAAA GGAAAAGCCCCTT ATGA AAGGGGCTTTTCT AGACCAGTGCGAAAC TERM 3169 2057310 - 2057283 - R 100 -17.2 -3.10597 | opp_overlap 2057288, overlap 2057282 2057288 CTTTTGATTCAAAAG GAAAAGCCCCTT ATGA AAGGGGCTTTTC TAGACCAGTGCGAAA TERM 3170 2057305 - 2057288 - R 90 -11.3 -4.68645 | opp_overlap 2057288, overlap 2057283 2057282 GATTCAAAAGGAAAA GCCCCTT ATGA AAGGGGC TTTTCTAGACCAGTG TERM 3171 2057288 - 2057305 + r 90 -11.3 -4.3739 | opp_overlap 2057288 2057283 2057282 GATTCAAAAGGAAAA GCCCCTT ATGA AAGGGGC TTTTCTAGACCAGTG hbs 2057648 - 2057370 - | non-specific DNA-binding protein HBsu TERM 3172 2058015 - 2057995 - R 82 -4.7 -5.50499 | CCATACGCAAAAAAA GACCCCT GTCAATG AGAGGTC TCACATGCTATAGAA spoIVA 2059501 - 2058023 - | spore cortex-coat assembly protein TERM 3173 2059602 - 2059625 + r 84 -2.4 -5.79595 | overlap 2059596 2059604 ATATATGTGTATGAC GTTGTCCTAT TTGA ATATGACACC TTTTTTGTTTTGAGA TERM 3174 2059694 - 2059662 - R 86 -5.7 -5.64274 | opp_overlap 2059662 TTAGCCATAAAAAAA CCTTTCTCCTC ATTTATATGCA GAGGAAAAAGG TTCATTCTTGTTTAT yphF 2060431 - 2059706 - | hypothetical protein yphE 2060652 - 2060449 - | hypothetical protein TERM 3175 2060798 - 2060770 - R 100 -7.5 -5.63504 | opp_overlap 2060770 2060783 AAGCGCATAAAAAAA CTGAAGCAAAG AGGGGGA CTCCGCTTCAG TCATTAGGTCGACTA gpsA 2061955 - 2060918 - | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase yphC 2063280 - 2061970 - | GTP-binding protein EngA TERM 3176 2063395 - 2063370 - R 84 -11.3 -3.73775 | opp_overlap 2063369 2063368 2063363, overlap 2063374 TTCAGTTTTATGAAA TAAACCCTTCA AACA TGAAGGGTTCA ACTTATATATTATAT TERM 3177 2063391 - 2063374 - R 89 -9.9 -4.49556 | opp_overlap 2063369 2063368 2063363, overlap 2063370 GTTTTATGAAATAAA CCCTTCA AACA TGAAGGG TTCAACTTATATATT BPUM_2016 2063634 - 2063440 - | hypothetical protein seaA 2064525 - 2063641 - | spore envelope protein TERM 3178 2063770 - 2063758 - G 70 -7.7 -3.66908 | TTGCGGTAAAATGAA CACAC CAA GTGTG CCGTTATTTAGATCT yphA 2065124 - 2064522 - | hypothetical protein BPUM_2019 2065197 - 2065376 + | hypothetical protein TERM 3179 2065400 - 2065382 - T 100 -9.6 -5.9003 | opp_overlap 2065381 AAATCAATAAAAAAA GCATGTGA TCA CCACATGC CTTAGATGAAAAAGG TERM 3180 2065414 - 2065434 + T 79 -4 -5.44198 | opp_overlap 2065414, overlap 2065405 GCCTTAGATGAAAAA GGGCTAAA CTCGC TTTAACCC TTTTTCTTATTTGTT TERM 3181 2065434 - 2065414 - T 77 -6.2 -4.8048 | opp_overlap 2065405 2065414 GCCTTAGATGAAAAA GGGCTAAA CTCGC TTTAACCC TTTTTCTTATTTGTT fni 2066495 - 2065428 - | isopentenyl pyrophosphate isomerase TERM 3182 2066350 - 2066324 - G 100 -13.8 -4.87665 | opp_overlap 2066324 TTGCATTGATAAAAA TTGGCGAACCGA AAG TCAGTCCGCCAA TTGTTGTATGTGTAT TERM 3183 2066324 - 2066350 + g 83 -9.4 -3.95786 | opp_overlap 2066324 TTGCATTGATAAAAA TTGGCGAACCGA AAG TCAGTCCGCCAA TTGTTGTATGTGTAT rpsA 2067661 - 2066510 - | 30S ribosomal protein S1 TERM 3184 2066545 - 2066567 + g 73 -3.5 -5.00196 | gap 2, opp_overlap 2066551, overlap 2066548 TATCGCCGATCAGGT CACCAAGCTGG AAT CC-GCTTG-TG TTTTCTTCTTTCGCC TERM 3185 2067115 - 2067128 + g 86 -6.7 -5.04175 | overlap 2067116 CTACCTCAAGTTTTT GCAAG AAGT CTTGC TTTTTGTCTAATTGC cmk 2068562 - 2067885 - | cytidylate kinase ypfB 2068816 - 2068634 - | hypothetical protein TERM 3186 2068861 - 2068824 - R 74 -4.9 -4.96848 | opp_overlap 2068824 GTCTTCATACAAAAA GCCTCCACGCTAGAA TCTATCAC CTCTAGTATGGAAGC TTTTAACATCCTTTA ypfA 2069527 - 2068880 - | hypothetical protein TERM 3187 2069593 - 2069616 + r 78 -11.1 -2.67189 | opp_overlap 2069593, overlap 2069590 ATGTATAAAACAAAA GGAAAAGGC TTATTC GCCTTTTCC TCACTTCCTTTTCTA TERM 3188 2069616 - 2069593 - R 100 -11.1 -5.19275 | opp_overlap 2069590 2069593 ATGTATAAAACAAAA GGAAAAGGC TTATTC GCCTTTTCC TCACTTCCTTTTCTA ypeB 2070978 - 2069629 - | hypothetical protein sleB 2071906 - 2070995 - | spore cortex-lytic enzyme TERM 3189 2071599 - 2071617 + g 78 -2.4 -5.5454 | TCTTTATAGTATTTT GTCTTTTG AAC TAAGAGGC TTTTTGTTTGTTTAC TERM 3190 2071809 - 2071821 + g 87 -6.3 -5.1925 | TGAATGACTTGACTT GTGAA GGC TTCAC TTTTTTCAGTTGTCA TERM 3191 2072029 - 2072008 - R 100 -7.3 -5.9362 | opp_overlap 2072008, overlap 2071992 GAAAAGACAAAAAAA CGCCCTATC AACT GATAAGACG TTTTTTTAAATTTGC TERM 3192 2072008 - 2072029 + r 80 -2.9 -5.58209 | opp_overlap 2072008 2071992 GAAAAGACAAAAAAA CGCCCTATC AACT GATAAGACG TTTTTTTAAATTTGC ypdC 2072691 - 2072035 - | hypothetical protein TERM 3193 2072812 - 2072840 + r 81 -3.1 -5.66684 | opp_overlap 2072815, overlap 2072815 CATTTTATAGCAAAA AAACTGAATCCCT TAA AAGGATCCAGTTC TTTTTTTATCCGTTC TERM 3194 2072837 - 2072815 - R 100 -9.2 -5.58454 | opp_overlap 2072812 2072815 TTTATAGCAAAAAAA CTGAATCCCT TAA AAGGATCCAG TTCTTTTTTTATCCG TERM 3195 2072815 - 2072837 + r 74 -4.8 -4.89054 | opp_overlap 2072815, overlap 2072812 TTTATAGCAAAAAAA CTGAATCCCT TAA AAGGATCCAG TTCTTTTTTTATCCG ypdA 2073817 - 2072846 - | thioredoxin reductase TERM 3196 2073891 - 2073912 + r 79 -8.1 -4.07885 | opp_overlap 2073891 CATTCAATAAAAAAA TCTCCTATT TAAG GATAGGAGA TTTTAAGGCGCGATG TERM 3197 2073912 - 2073891 - R 100 -7.4 -5.8187 | opp_overlap 2073891 CATTCAATAAAAAAA TCTCCTAT TTAAGG ATAGGAGA TTTTAAGGCGCGATG gudB 2075214 - 2073940 - | glutamate dehydrogenase TERM 3198 2074767 - 2074781 + g 73 -8.6 -3.71527 | GTGCTGGTACATCTT TCGTTG GAC CAACGA TTTGACTGATTGCGC TERM 3199 2075385 - 2075362 - R 100 -8.3 -5.75478 | opp_overlap 2075362, overlap 2075384 AAGGATATAAAAAAA TACTGTTGT TTCATC ACAACAGTA TTAAATATAATAGAA ypbH 2075990 - 2075409 - | adaptor protein ypbG 2076944 - 2076156 - | metallophosphoesterase TERM 3200 2076669 - 2076683 + g 74 -4.2 -4.9218 | ATTTTCTTCTATTCT GGCGTA GGG TACACC TTTTTCTGCTAAGTC TERM 3201 2076920 - 2076907 - G 71 -9.5 -3.02263 | ACACCTGTTGTAACA GCCGC AATG GCGGC GGTAAATCCGATGGC TERM 3202 2076998 - 2077020 + r 83 -7.8 -4.6526 | opp_overlap 2076998 GCTTGAATGAAAAAA GACGTTTCAA CTA TTAAAACGTC TTTTTACGCATTTAT TERM 3203 2077020 - 2076998 - R 100 -10 -5.26875 | opp_overlap 2076998 GCTTGAATGAAAAAA GACGTTTCAA CTA TTAAAACGTC TTTTTACGCATTTAT ypbF 2077485 - 2077093 - | hypothetical protein TERM 3204 2077161 - 2077183 + g 73 -2.7 -5.22104 | gap 1, overlap 2077154 2077157 TAATCTCACATCTGA GGC-GATGAT ATTC ATCCTCAGCC TTTTCTTCTTTTTTC ypbE 2078311 - 2077550 - | hypothetical protein TERM 3205 2077935 - 2077963 + gr 100 -8.8 -5.71712 | TTCTTCTCTTCGTCA GACGCATCCGCT TTATC AGCGTTTGCGTC TTTTTTTGTATCGGC ypbD 2078897 - 2078256 - | hypothetical protein recQ 2080402 - 2078894 - | ATP-dependent helicase RecQ ypbB 2081447 - 2080395 - | hypothetical protein TERM 3206 2080741 - 2080751 + g 79 -6.8 -4.58283 | opp_overlap 2080740 AGTTGCTGCAAAATC GGTG CCT CACC TTTTTGGGCAGATTG TERM 3207 2081198 - 2081214 + g 76 -2.9 -5.34555 | overlap 2081190 2081199 2081201 GCCCTGCTTCAGTGA TGCTGAG TGT CTCATCG TTTTTTCTAATGTAG fer 2081715 - 2081963 + | ferredoxin TERM 3208 2081992 - 2081966 - T 72 -9.5 -2.79209 | opp_overlap 2081971, overlap 2081971 TAAGCATGAATAGTA TAAAAGCCCCT TATGC AGGGGCTTTTT TTATATTAACTATTT TERM 3209 2081987 - 2081971 - T 88 -9.4 -4.55625 | opp_overlap 2081971, overlap 2081966 ATGAATAGTATAAAA GCCCCT TATGC AGGGGC TTTTTTTATATTAAC TERM 3210 2081971 - 2081987 + T 100 -9.4 -5.80817 | opp_overlap 2081971 2081966 ATGAATAGTATAAAA GCCCCT TATGC AGGGGC TTTTTTTATATTAAC ypaA 2082579 - 2081998 - | hypothetical protein TERM 3211 2082666 - 2082645 - H 100 -10.1 -5.64274 | TCAGCCACAAAAAAA CCGCTCATG AAAA CAGGAGCGG GGAATTTAGGCTAGA TERM 3212 2083693 - 2083678 - g 76 -2.5 -5.25803 | AACGTGCAGAAAAAA TCGGC GTCAAT GCCAA ATCACTTGATGAAGT TERM 3213 2084621 - 2084607 - g 79 -3.4 -5.30616 | overlap 2084609 2084620 GGACGTAAAGAAAAA GGCGGC GAA GCCATC ATGATGCTTTCTTTC serA 2083143 - 2084717 + | D-3-phosphoglycerate dehydrogenase TERM 3214 2084756 - 2084725 - T 100 -13.2 -3.72073 | opp_overlap 2084727, overlap 2084727 2084731 ACCTATGAAAATCAA TATAAACCTCATGC AAAT GCATGAGGTTTATT TTTTTGAAACCATTA TERM 3215 2084754 - 2084727 - T 100 -15.8 -3.43546 | opp_overlap 2084727, overlap 2084725 2084731 CTATGAAAATCAATA TAAACCTCATGC AAAT GCATGAGGTTTA TTTTTTTGAAACCAT TERM 3216 2084727 - 2084754 + T 100 -15.8 -5.40474 | opp_overlap 2084727 2084725 2084731 CTATGAAAATCAATA TAAACCTCATGC AAAT GCATGAGGTTTA TTTTTTTGAAACCAT TERM 3217 2084750 - 2084731 - T 95 -12.2 -4.3341 | opp_overlap 2084727, overlap 2084727 2084725 GAAAATCAATATAAA CCTCATGC AAAT GCATGAGG TTTATTTTTTTGAAA BPUM_2040 2085396 - 2084752 - | M23 family peptidase TERM 3218 2085495 - 2085476 - R 88 -6.4 -5.24989 | opp_overlap 2085479 CTATACATCAAAAAA GAACGCAA TTTC TCGCGTCC TTTAACGGTCTTTTA rsiX 2086540 - 2085497 - | sigma X negative regulator TERM 3219 2086446 - 2086432 - G 70 -2.8 -4.99645 | overlap 2086433 2086435 2086438 ACGCCATAAATAAAA CCACAA CGG TTGCGA CCGCTGGACCGATCC sigX 2087126 - 2086518 - | RNA polymerase sigma factor SigX BPUM_2043 2087446 - 2087237 - | hypothetical protein TERM 3220 2087297 - 2087271 - G 100 -8.2 -6.11229 | overlap 2087258 ATGAAAATAAAAAAA CACTTCTTTT TCTTTCG AAAAGAAGTG CCAGATTGTTGACAA TERM 3221 2087308 - 2087346 + g 100 -21.4 -4.18506 | opp_overlap 2087314, overlap 2087314 AAGTGCCAGATTGTT GACAAAGGGCTAAAATGA TCT TTATTTTAGCCCTTTGTC TTCTTTTCAGCGTGA TERM 3222 2087340 - 2087314 - G 88 -11 -3.87373 | opp_overlap 2087308 2087314 CAGATTGTTGACAAA GGGCTAAAATGA TCT TTATTTTAGCCC TTTGTCTTCTTTTCA TERM 3223 2087314 - 2087340 + g 100 -13.2 -4.45253 | opp_overlap 2087314, overlap 2087308 CAGATTGTTGACAAA GGGCTAAAATGA TCT TTATTTTAGCCC TTTGTCTTCTTTTCA TERM 3224 2087475 - 2087501 + r 86 -11.1 -4.0162 | TTGTCTACACGCTGA CACTTCTTTTT CTTTC AAAAAGAAGTG TTTCTCATGTAACAA resE 2089313 - 2087532 - | sensor histidine kinase resD 2090032 - 2089310 - | response regulator resC 2091298 - 2090120 - | cytochrome c biogenesis protein ResC resB 2092961 - 2091282 - | cytochrome c biogenesis protein ResB resA 2093493 - 2092963 - | thiol-disulfide oxidoreductase rluB 2094429 - 2093584 - | pseudouridylate synthase TERM 3225 2093798 - 2093822 + g 86 -10.1 -4.07568 | opp_overlap 2093796 TGAACAATACAAGTT TGCTTTCGTTT ATC AATCGAAAGCA TTTTGGCACGGGCAG TERM 3226 2093826 - 2093843 + g 91 -4.8 -5.69473 | overlap 2093827 CAATCGAAAGCATTT TGGCAC GGGCAG GTGCCG TTTTTTTATGATCTA TERM 3227 2094463 - 2094448 - R 100 -10.4 -5.56264 | overlap 2094441 TTGAAAGACAAAAAA GCGCCT CTTT AGGCGC CGCTAAATAACAAAC spmB 2094992 - 2094456 - | spore maturation protein B spmA 2095584 - 2094997 - | spore maturation protein A dacB 2096729 - 2095572 - | serine-type D-Ala-D-Ala carboxypeptidase TERM 3228 2096823 - 2096802 - R 100 -9.5 -5.93809 | opp_overlap 2096802 2096804 CGTCCATAAAAAAAA GCGTCTCTA TATG TAGAGACAC TTTTCCTCTTGCTAT TERM 3229 2096802 - 2096823 + r 78 -7.3 -4.45399 | opp_overlap 2096802, overlap 2096804 CGTCCATAAAAAAAA GCGTCTCTA TATG TAGAGACAC TTTTCCTCTTGCTAT ypuI 2097314 - 2096835 - | hypothetical protein scpB 2098021 - 2097428 - | segregation and condensation protein B scpA 2098769 - 2098011 - | segregation and condensation protein A TERM 3230 2098395 - 2098405 + g 74 -6.8 -4.25458 | opp_overlap 2098395 CGGAGGTTTTGTAAA GGCA TTT TGCC TTTCTTCCTCGCGTT BPUM_2056 2098978 - 2099070 + | hypothetical protein TERM 3231 2099072 - 2099109 + F 91 -9.3 -5.11836 | gap 1, opp_overlap 2099076 2099078, overlap 2099078 CTTGGGTTTATTAAA GAA-ACAGAGCGTCCTTT CAC GAAGGGCGCTCTTTCTTC TTTTCTTTTCAATAT TERM 3232 2099104 - 2099076 - f 78 -7.4 -4.49556 | opp_overlap 2099072 2099078, overlap 2099078 GGTTTATTAAAGAAA CAGAGCGTCCTT TCACG AAGGGCGCTCTT TCTTCTTTTCTTTTC TERM 3233 2099102 - 2099078 - f 81 -10 -3.85603 | opp_overlap 2099072 2099078, overlap 2099076 TTTATTAAAGAAACA GAGCGTCCTT TCACG AAGGGCGCTC TTTCTTCTTTTCTTT TERM 3234 2099078 - 2099102 + F 100 -12.9 -4.78266 | opp_overlap 2099078 2099076, overlap 2099072 TTTATTAAAGAAACA GAGCGTCCTTT CAC GAAGGGCGCTC TTTCTTCTTTTCTTT TERM 3235 2099478 - 2099462 - g 71 -3 -5.00196 | gap 1 TGCTAAAGAAGAAAA TGGC-TG AAGA CATGCCA TACGAAAGTGTGATG ypuF 2099158 - 2099682 + | hypothetical protein TERM 3236 2099669 - 2099689 + T 82 -8.3 -4.26589 | opp_overlap 2099669 TCGAACGTAAAAAAA GCAGAGG ACTGTAG CCTCTGC TTTTACATGTGTGAT TERM 3237 2099689 - 2099669 - T 100 -8.3 -5.53288 | opp_overlap 2099669 TCGAACGTAAAAAAA GCAGAGG ACTGTAG CCTCTGC TTTTACATGTGTGAT ribT 2100060 - 2099707 - | reductase ribH 2100638 - 2100174 - | riboflavin synthase subunit beta ribA 2101292 - 2100666 - | bifunctional GTP cyclohydrolase II/3,4-dihydroxy-2-butanone 4-phosphate synthase ribE 2101954 - 2101304 - | riboflavin synthase subunit alpha TERM 3238 2102120 - 2102150 + r 73 -8.2 -3.64812 | opp_overlap 2102125, overlap 2102121 2102123 ACTACATGTACATAC AGAAAGCCCCGGAA AAA TTCCGGGGCTGTGG CTTTTTTGCATCAGA TERM 3239 2102121 - 2102151 + r 78 -5.5 -5.08824 | gap 2, opp_overlap 2102125, overlap 2102120 2102123 CTACATGTACATACA G--AAAGCCCCGGAA AAA TTCCGGGGCTGTGGC TTTTTTGCATCAGAA TERM 3240 2102123 - 2102147 + r 95 -14.3 -2.93182 | opp_overlap 2102125, overlap 2102120 2102121 ACATGTACATACAGA AAGCCCCGGAA AAA TTCCGGGGCTG TGGCTTTTTTGCATC TERM 3241 2102145 - 2102125 - R 100 -16.9 -4.17698 | opp_overlap 2102123 2102120 2102121 ATGTACATACAGAAA GCCCCGGAA AAA TTCCGGGGC TGTGGCTTTTTTGCA TERM 3242 2102282 - 2102264 - R 79 -10.4 -3.37344 | TTTTCACTGAATCAA CCGTTAAT AAA ATTAACGG GTCACGGGCTGTAAA TERM 3243 2102451 - 2102430 - R 88 -6.6 -5.24531 | opp_overlap 2102430 ATTTCTCACAAAAAA GCCTCCTT ATAGGA AAGGAGAC TTGTTAATTAACGAC ypuD 2102799 - 2102455 - | lipoprotein BPUM_2063 2103257 - 2103024 - | hypothetical protein TERM 3244 2103426 - 2103397 - R 100 -9.5 -5.45802 | opp_overlap 2103391 GTCCTAAAAGAAAAA GCGTATTTTGA CATTGAGT TCAAAATACGC TATCGCTCTTATTGA yezE 2104051 - 2103470 - | TetR family transcriptional regulator BPUM_2065 2104292 - 2105551 + | major facilitator transporter TERM 3245 2105581 - 2105563 - T 100 -8.8 -5.88565 | opp_overlap 2105563 TTGATAATAAAAAAA CACCGCGT TTT AAGCGGTG TTTTGCATTGAGCAT TERM 3246 2105563 - 2105581 + T 83 -8.8 -4.27584 | opp_overlap 2105563 TTGATAATAAAAAAA CACCGCGT TTT AAGCGGTG TTTTGCATTGAGCAT ppiB 2106033 - 2105596 - | peptidylprolyl isomerase ypuA 2106339 - 2107238 + | hypothetical protein TERM 3247 2107280 - 2107244 - T 72 -8.9 -3.38158 | opp_overlap 2107252, overlap 2107246 2107252 AGGAAAATAAGTCAA CATAAAAAGCTGCCT GTATACT AGGCAGCTTTTTTTA CGTAGATGATTTTAC TERM 3248 2107278 - 2107246 - T 75 -9.3 -3.24545 | opp_overlap 2107252, overlap 2107244 2107252 GAAAATAAGTCAACA TAAAAAGCTGCCT GTATACT AGGCAGCTTTTTT TACGTAGATGATTTT TERM 3249 2107272 - 2107252 - T 91 -8.3 -5.1167 | opp_overlap 2107252, overlap 2107246 2107244 AAGTCAACATAAAAA GCTGCCT GTATACT AGGCAGC TTTTTTTACGTAGAT TERM 3250 2107252 - 2107272 + T 100 -9 -5.47821 | opp_overlap 2107252 2107246 2107244 AAGTCAACATAAAAA GCTGCCTG TATAC TAGGCAGC TTTTTTTACGTAGAT lysA 2108609 - 2107278 - | diaminopimelate decarboxylase TERM 3251 2108452 - 2108464 + g 77 -6.3 -4.58395 | opp_overlap 2108452 2108451 TCTTCTTCTATAAAT GCTTT TTG AAAGC TTTTTGCGCGCTCCC TERM 3252 2108657 - 2108639 - R 93 -10.3 -5.00616 | opp_overlap 2108639 CTTCGGCTGAAAAAA GGCAGCT GCGTG AGCTGCC TTTTGCCGTGTCTCA TERM 3253 2108639 - 2108657 + r 85 -10.3 -4.18401 | opp_overlap 2108639 CTTCGGCTGAAAAAA GGCAGCT GCGTG AGCTGCC TTTTGCCGTGTCTCA spoVAF 2110191 - 2108719 - | stage V sporulation protein AF spoVAEA 2110753 - 2110145 - | stage V sporulation protein AEA spoVAEB 2111110 - 2110760 - | stage V sporulation protein AEB spoVAD 2112126 - 2111110 - | stage V sporulation protein AD TERM 3254 2111275 - 2111259 - G 76 -6.6 -4.57569 | TCATTTCTTGAAAAA TGTGAC TAAAT GTCACA ACAGCTGAACAAGCA TERM 3255 2112163 - 2112148 - R 70 -6.2 -4.25104 | opp_overlap 2112150 TTCCTCCTACGAAAA CATCTT TTCA AAGATG TATCGAATGATCCCT spoVAC 2112591 - 2112139 - | stage V sporulation protein AC spoVAB 2113027 - 2112611 - | stage V sporulation protein AB spoVAA 2113637 - 2113017 - | stage V sporulation protein AA TERM 3256 2113756 - 2113738 - R 100 -8.1 -5.74122 | opp_overlap 2113736 2113738 TACCACACAAAAAAA GCCAGCC GAATT GGCTAGC TCTCTTTTTGATCCA sigF 2114519 - 2113752 - | sporulation sigma factor SigF spoIIAB 2114973 - 2114533 - | anti-sigma F factor spoIIAA 2115323 - 2114970 - | stage II sporulation anti-anti-sigma factor TERM 3257 2115475 - 2115456 - R 71 -4.2 -4.8048 | TTCTCATAGCAAAAA GACTGCCA ATTA CAGCAGCC TTTCCTATTTTATTT dacF 2116687 - 2115485 - | serine-type D-Ala-D-Ala carboxypeptidase TERM 3258 2116760 - 2116783 + r 78 -11.1 -2.7185 | opp_overlap 2116760 ATTGTCATAAAAAAA GCCTTCTGT CGATAA ACAGAAGGC TGCTTGAAACATGCT TERM 3259 2116783 - 2116760 - R 100 -11.8 -5.61596 | opp_overlap 2116760 ATTGTCATAAAAAAA GCCTTCTGTC GATA AACAGAAGGC TGCTTGAAACATGCT punA 2117609 - 2116797 - | purine-nucleoside phosphorylase drm 2118805 - 2117621 - | phosphopentomutase TERM 3260 2118868 - 2118852 - R 70 -5.1 -4.59853 | TGAACCTTTCAAAAA GAGAGGT CTG ACATCTC AAGTATAAACCGTTT TERM 3261 2118961 - 2118916 - R 70 -7.9 -3.60074 | gap 1, opp_overlap 2118925, overlap 2118925 CATAAACGGTGCAAA CATAAA-AAAGCATGACACA CGTTCAC CGTGCCATGCTTTACTTATG CCCTTGGATGGAATT TERM 3262 2118951 - 2118925 - R 90 -6.6 -5.56264 | opp_overlap 2118925, overlap 2118916 TGCAAACATAAAAAA GCATGACACA CGTTCAC CGTGCCATGC TTTACTTATGCCCTT xerD 2119847 - 2118957 - | site-specific tyrosine recombinase XerD BPUM_2083 2120090 - 2119854 - | hypothetical protein TERM 3263 2120186 - 2120164 - R 100 -7.8 -5.2696 | overlap 2120179 CGAAAATGCAAAAAA CCTCTTCATC TTA AATGAAAAGG TTCCAATTCGGATTA fur 2120651 - 2120199 - | Fur family transcriptional regulator Fur spoIIM 2121417 - 2120770 - | stage II sporulation protein M TERM 3264 2121526 - 2121499 - R 89 -6.3 -5.65927 | TATTGAAAGAAAAAA GAGAAAGCAGC CTAAAC ACTGCCCTCTC TTCTCATTTATCGTG TERM 3265 2121797 - 2121809 + r 80 -6.3 -5.13722 | opp_overlap 2121797 2121796 CGCCGACAGATGAAT CAAAG GCT CTTTG TTTTCTTTTGATCAA TERM 3266 2122494 - 2122512 + r 80 -6 -5.05601 | CTTTTACATGTCCAC CAGCTTCT TCA ACAAGCTG TTTTTGTGTATGATC TERM 3267 2122796 - 2122828 + r 76 -8.7 -3.72982 | gap 1, opp_overlap 2122796, overlap 2122792 AAAGCAAAATAAAAA TGCTTATGATC-CT CTTGAT AGTGATCATAAGCA TTCCTTCTTTTATGT TERM 3268 2122828 - 2122796 - R 100 -8.7 -5.56372 | gap 1, opp_overlap 2122796 2122792 AAAGCAAAATAAAAA TGCTTATGATC-CT CTTGAT AGTGATCATAAGCA TTCCTTCTTTTATGT yqkK 2122995 - 2122774 - | hypothetical protein TERM 3269 2122861 - 2122872 + g 81 -4.4 -5.40873 | TCTCATCATGTGCTG CAAG GCTT CTTG TTTTGTTTTTGTCTT TERM 3270 2123047 - 2123068 + r 78 -7.3 -4.45168 | opp_overlap 2123047 ATATGACATAAAAAA GATAGACGT CTAC ACGCCTATC TTTCTGTTTTCACCA TERM 3271 2123068 - 2123047 - R 100 -9.5 -5.40625 | opp_overlap 2123047 ATATGACATAAAAAA GATAGACGT CTAC ACGCCTATC TTTCTGTTTTCACCA yybD 2123516 - 2123064 - | acetyltransferase yqxK 2124684 - 2123503 - | hypothetical protein nudF 2125238 - 2124681 - | ADP-ribose diphosphatase TERM 3272 2125501 - 2125487 - g 73 -2.8 -5.1244 | CTAGGAACAGAAAAA GGAAAA GCG CTCTCC TTATTAGATGAAGCC TERM 3273 2125635 - 2125645 + G 71 -8.2 -3.53012 | opp_overlap 2125635 2125634 TTTTGGCCACAAAAG GCGG CAA CCGC TTTGAAAAAGGCAAA TERM 3274 2126046 - 2126027 - g 73 -2.8 -5.0916 | overlap 2126010 2126028 CTTTTAACAGAAAAA CCACTTTC GGAA GCAAGTGA CTCGATTCAAAAAAA yqkF 2125406 - 2126329 + | Tas family dehydrogenase TERM 3275 2126359 - 2126339 - T 89 -6.2 -5.57729 | AAATAAGATAAAAAA GAGATCAC TGTAT GTAATCTC TCGCGATTGTAAAGA TERM 3276 2126366 - 2126393 + T 100 -5 -5.86976 | TGTAATCTCTCGCGA TTGTAAAGAAAC TCAT GTTTTTCTACAA TTTTTTATTTTATCG TERM 3277 2126480 - 2126466 - T 90 -11.4 -3.97102 | opp_overlap 2126466, overlap 2126459 AGGGAAAAGCAAGAA GGGGCT AAA AGCCCC TTTGTCTTATCTTGC TERM 3278 2126466 - 2126480 + T 93 -11.4 -4.34444 | opp_overlap 2126466 2126459 AGGGAAAAGCAAGAA GGGGCT AAA AGCCCC TTTGTCTTATCTTGC BPUM_2092 2126876 - 2126487 - | hypothetical protein TERM 3279 2127042 - 2127027 - R 100 -5.4 -6.0427 | opp_overlap 2127027 ATGACATAAAAAAAA GAAGCA ACAG TGCTCC CTTTTTTAGCTTTTA BPUM_2093 2127197 - 2127048 - | hypothetical protein TERM 3280 2127381 - 2127371 - g 75 -3.2 -5.18726 | TCGTCATAAGAAAAA CCTC GGA AAGG AAGAGGCAGCTAGAT BPUM_2094 2127249 - 2127398 + | hypothetical protein yqkD 2127395 - 2128327 + | serine peptidase TERM 3281 2128317 - 2128345 + T 100 -9 -5.29385 | gap 1, opp_overlap 2128312 2128317 TGAATGAAGATAAAA GAGGAGAATGAAC AGCG GTTCG-TCTCCTC TTTTTTAGTTAACTT TERM 3282 2128345 - 2128317 - T 79 -6.8 -4.73864 | gap 1, opp_overlap 2128317, overlap 2128312 TGAATGAAGATAAAA GAGGAGAATGAAC AGCG GTTCGT-CTCCTC TTTTTTAGTTAACTT rapA3 2129616 - 2128354 - | aspartate phosphatase response regulator TERM 3283 2128987 - 2129002 + g 71 -4.7 -4.62069 | overlap 2128980 GTTTCCAATTGAGCG TGCTC GATTTA GAGCA TTTTTAAAGTAGGGC TERM 3284 2129201 - 2129233 + g 84 -2.8 -5.67063 | gap 1 TTAAAGTAAAATTCT GCTCTTTCT-ATATC ATCT GATATGAGATTGAGC TTTTTTTCTGCTGAA TERM 3285 2129326 - 2129312 - G 73 -3.6 -5.00884 | ATTCCTGTGAAAAAA TGAACA TAG TATTCA AGCATGTCCGTTAAT TERM 3286 2129918 - 2129901 - R 100 -8.5 -5.54894 | opp_overlap 2129900 2129901 AAGGCACGAAAAAAA CCCTTTT GTCA AAAAGGG CTTTTATAATACATC TERM 3287 2129901 - 2129918 + r 70 -8.5 -3.2812 | opp_overlap 2129901, overlap 2129900 AAGGCACGAAAAAAA CCCTTTT GTCA AAAAGGG CTTTTATAATACATC yqkC 2130161 - 2129922 - | hypothetical protein yqkB 2130500 - 2130174 - | hypothetical protein yqkA 2131593 - 2130616 - | hypothetical protein yqjY 2132090 - 2131590 - | hypothetical protein TERM 3288 2131747 - 2131757 + g 71 -6.8 -4.15849 | opp_overlap 2131747 ACTCTATTAACAGGA GCTG TGA CAGC TTTAATTGTTGTTCT TERM 3289 2132413 - 2132428 + G 75 -5.4 -4.8269 | overlap 2132425 ACTTCGCTGCCTTCT GGTGTT GTGG AACGCC TTTTTAGTCGTTATG TERM 3290 2132650 - 2132640 - g 70 -5.4 -4.47183 | TACTATGCAAACAAA GCTT GGT AAGC ATGATGTGACCCTTT yfmQ 2132344 - 2132793 + | hypothetical protein TERM 3291 2132806 - 2132842 + F 95 -13.2 -3.10537 | opp_overlap 2132810 2132813 2132815, overlap 2132813 TAAAATATGTTGTAT CAAATGAGACGAAGTG TTTTC CACTTCGTCTTTTTTG TATGGTTTTACACTC TERM 3292 2132813 - 2132835 + F 100 -12.1 -5.43487 | opp_overlap 2132810 2132813 2132815, overlap 2132806 TGTTGTATCAAATGA GACGAAGTG TTTTC CACTTCGTC TTTTTTGTATGGTTT TERM 3293 2132835 - 2132813 - f 87 -12.1 -2.96695 | opp_overlap 2132813 2132806, overlap 2132810 2132815 TGTTGTATCAAATGA GACGAAGTG TTTTC CACTTCGTC TTTTTTGTATGGTTT TERM 3294 2133017 - 2133003 - g 86 -7.8 -4.62069 | GCGTCAGTCGAAAAA GTGGAG GCT CCCCAC TTGAAGGATGTGCCG TERM 3295 2133615 - 2133600 - g 70 -2.5 -5.0133 | GATCGGCTTAAAAAA CGCTG GGGAAT CAACG GAGAAATTTTGCAGC polY2 2132943 - 2134175 + | DNA polymerase IV BPUM_2103 2134191 - 2134535 + | hypothetical protein TERM 3296 2135935 - 2135915 - g 70 -5.4 -4.57569 | gap 1, overlap 2135903 CTACCGCCTGAAAAA GCGATCCGC GGCT ACGG-TCGC TGTGAAAGTAAGTGG BPUM_2104 2134725 - 2135960 + | major facilitator superfamily sugar:cation symporter TERM 3297 2135960 - 2135989 + T 81 -9.4 -3.96148 | opp_overlap 2135966, overlap 2135966 AAGTGGAGGTCATTA AAAAAACCGCTC TCGTAT GAGCGGTTTTTC TTTATACTCGGCGGA TERM 3298 2135966 - 2135983 + T 100 -8.4 -5.40464 | opp_overlap 2135966, overlap 2135960 AGGTCATTAAAAAAA CCGCTC TCGTAT GAGCGG TTTTTCTTTATACTC TERM 3299 2135983 - 2135966 - T 100 -8.4 -5.52986 | opp_overlap 2135966 2135960 AGGTCATTAAAAAAA CCGCTC TCGTAT GAGCGG TTTTTCTTTATACTC coaA 2136872 - 2135991 - | pantothenate kinase BPUM_2106 2137137 - 2138465 + | NADH dehydrogenase TERM 3300 2138501 - 2138523 + T 100 -9.2 -5.80727 | opp_overlap 2138501 CTCATTTCAAAAAAA GAAACCAGTT CAT AACCGGTTTC TTTTTTGTTATTTTT TERM 3301 2138523 - 2138501 - T 100 -11.4 -5.44119 | opp_overlap 2138501 CTCATTTCAAAAAAA GAAACCAGTT CAT AACCGGTTTC TTTTTTGTTATTTTT yqjQ 2139307 - 2138531 - | dehydrogenase yqjP 2140270 - 2139320 - | zinc metallohydrolase TERM 3302 2140637 - 2140661 + H 100 -7.2 -6.14618 | gap 1, opp_overlap 2140637, overlap 2140630 TGGTACCGCGAAAAA CCTTTCGTCCT TTTC AGG-CGAGAGG TTTTTTTATTTTCTA TERM 3303 2140661 - 2140637 - H 70 -5 -4.59773 | gap 1, opp_overlap 2140630 2140637 TGGTACCGCGAAAAA CCTTTCGTCCT TTTC AGG-CGAGAGG TTTTTTTATTTTCTA TERM 3304 2141309 - 2141329 + G 71 -9.7 -2.71144 | opp_overlap 2141309 2141312 TGCTCATCTGCCAAA TGATTGCGG GCG CCGCAAACA TGCTTCAAAGCAGTG TERM 3305 2141329 - 2141309 - g 78 -9.7 -3.55444 | opp_overlap 2141309, overlap 2141312 TGCTCATCTGCCAAA TGATTGCGG GCG CCGCAAACA TGCTTCAAAGCAGTG TERM 3306 2141326 - 2141312 - g 73 -10 -2.91144 | opp_overlap 2141309, overlap 2141309 TCATCTGCCAAATGA TTGCGG GCG CCGCAA ACATGCTTCAAAGCA proI 2140693 - 2141520 + | pyrroline-5-carboxylate reductase 2 TERM 3307 2141557 - 2141525 - f 74 -9.3 -3.08467 | opp_overlap 2141530, overlap 2141530 CGTATAAATGATAGA GAAAAGCACCTGT TTTGATG ACAGGTGCTTTTT ATTTTTATCTAATAA TERM 3308 2141530 - 2141552 + F 100 -9.9 -5.71295 | opp_overlap 2141525 2141530 AAATGATAGAGAAAA GCACCTGTT TTGAT GACAGGTGC TTTTTATTTTTATCT TERM 3309 2141552 - 2141530 - f 88 -9.2 -4.65494 | opp_overlap 2141530, overlap 2141525 AAATGATAGAGAAAA GCACCTGT TTTGATG ACAGGTGC TTTTTATTTTTATCT BPUM_2110 2141674 - 2141946 + | hypothetical protein TERM 3310 2141954 - 2141972 + T 79 -10.2 -3.54181 | overlap 2141949 2141955 GAGTATAATTCTAAC TGGGAGCC TAC GGCTCCCC TTACTATTTTAAAGT TERM 3311 2141955 - 2141971 + T 91 -13.7 -2.71785 | overlap 2141954 2141949 AGTATAATTCTAACT GGGAGCC TAC GGCTCCC CTTACTATTTTAAAG yqjN 2143714 - 2142101 - | M20A subfamily peptidase TERM 3312 2144214 - 2144192 - g 75 -10.6 -2.7728 | opp_overlap 2144187, overlap 2144194 CGTAAAGCTGAACTA GATGGTGACA TCC TGGCACCATC CAGCATTCCATTTGA yqjM 2143856 - 2144872 + | NADPH dehydrogenase NamA TERM 3313 2144889 - 2144914 + F 100 -7.7 -5.93252 | opp_overlap 2144889 2144891 AATGCATAGGAAAAA GGTGTCTATTT TTTG AAATAGGCATC TTTTTTATTTTTAAG yqjL 2144993 - 2145757 + | hydrolase TERM 3314 2145767 - 2145793 + T 100 -9.4 -6.02919 | opp_overlap 2145767 AATTAAAAACAAAAA CTCCTTGACTAG TGA CGCGTCAAGGAG TTTTTTTCTTTATAC TERM 3315 2145793 - 2145767 - T 100 -9.4 -5.67529 | opp_overlap 2145767 AATTAAAAACAAAAA CTCCTTGACTAG TGA CGCGTCAAGGAG TTTTTTTCTTTATAC BPUM_2114 2147110 - 2145803 - | aminotransferase TERM 3316 2146463 - 2146477 + g 77 -3.5 -5.18643 | ATCATCCCAAAAAAT GCGGA AGTCG TCTGC TTTTGTTTTCATTGA rnz 2148179 - 2147250 - | ribonuclease Z TERM 3317 2148360 - 2148341 - H 74 -5.8 -4.66535 | opp_overlap 2148341, overlap 2148328 AACCTTTAAAATAAA GAAAATGT ACAT ACATTCTC GGTTTTTACAACAAT TERM 3318 2148532 - 2148560 + G 77 -10.9 -2.78596 | opp_overlap 2148516 TTGGCGATCAATTCG CCGTGGTCGGTGT TGG ACGCCGTCCGTGG TCTCATGAGGACCTA zwf 2148402 - 2149877 + | glucose-6-phosphate 1-dehydrogenase TERM 3319 2149918 - 2149892 - T 83 -6.4 -5.13521 | opp_overlap 2149892 AAATGATTTAAAAAA GAGCAGTCTCCC TTG GGGGTTCTGCTC TTTTTTTAACGTCCT TERM 3320 2149892 - 2149918 + T 100 -8.6 -5.44721 | opp_overlap 2149892 AAATGATTTAAAAAA GAGCAGTCTCCC TTG GGGGTTCTGCTC TTTTTTTAACGTCCT ydhQ 2150646 - 2149924 - | transcriptional regulator TERM 3321 2150764 - 2150793 + r 72 -8.7 -3.23853 | opp_overlap 2150764, overlap 2150762 GTCACATAAGAAAAA TACTTGCCCTTTT CAAG GAAAGAGCAAGTA TCTTAATTAAAAACC TERM 3322 2150793 - 2150764 - R 100 -10.2 -5.24796 | opp_overlap 2150764 2150762 GTCACATAAGAAAAA TACTTGCCCTTT TCAAGG AAAGAGCAAGTA TCTTAATTAAAAACC ydhP 2152206 - 2150800 - | 6-phospho-beta-glucosidase TERM 3323 2151124 - 2151135 + g 71 -2.2 -5.14477 | TTCAATATTATCATA GTCT GTTT GGAC TTTTTTCAATATATC ydhO 2153536 - 2152190 - | PTS family cellobiose porter component IIC ydhN 2153894 - 2153562 - | PTS family cellobiose porter component IIA TERM 3324 2153679 - 2153661 - G 70 -7.5 -3.75024 | GTGCATGAGCAATAA GGAGAAA GGTGT TTTCTCC CCGCCTGCCTCTTGC ydhM 2154209 - 2153898 - | PTS family cellobiose porter component IIB TERM 3325 2154267 - 2154290 + r 76 -9.8 -3.10789 | overlap 2154264 ATTATATATTTTTAT TTCTAAATGT CTAG ACATTTAGAA TCATTTGTCTGTATT TERM 3326 2154319 - 2154338 + r 100 -8.6 -5.52807 | opp_overlap 2154319 TTTTATATAAAAAAA GAGCGTAT GTGT GTACGCTC TTTTTGTTTCTTCTT TERM 3327 2154338 - 2154319 - R 100 -7.9 -5.71712 | opp_overlap 2154319 TTTTATATAAAAAAA GAGCGTA TGTGTG TACGCTC TTTTTGTTTCTTCTT gdh 2155137 - 2154352 - | glucose-1-dehydrogenase TERM 3328 2155092 - 2155112 + g 84 -6.2 -4.93968 | gap 1, overlap 2155096 GACCTATTCCTGTAC CAGCTCCTG TGAT CAGGA-CTG TTTTTCCTTCTAAAT glcU 2155998 - 2155150 - | DMT superfamily drug/metabolite transporter TERM 3329 2156104 - 2156071 - R 72 -7.6 -3.85184 | opp_overlap 2156079, overlap 2156079 CCGAAAAGATGCAAA CAAAAAAACCTTAC GGAAGG GTAAGGTTTTTCAG TCGTTCTATGTTTAT TERM 3330 2156096 - 2156079 - R 100 -5.6 -5.96894 | opp_overlap 2156079, overlap 2156071 ATGCAAACAAAAAAA CCTTAC GGAAGG GTAAGG TTTTTCAGTCGTTCT TERM 3331 2156079 - 2156096 + r 74 -5.6 -4.71382 | opp_overlap 2156071 2156079 ATGCAAACAAAAAAA CCTTAC GGAAGG GTAAGG TTTTTCAGTCGTTCT yqjI 2157525 - 2156116 - | 6-phosphogluconate dehydrogenase TERM 3332 2157290 - 2157300 + g 71 -6.8 -4.19238 | opp_overlap 2157276 ATGGTTGCATCCGTT GCTG CAC CAGC TTTTACCATTAAAAG polY1 2158868 - 2157624 - | DNA polymerase IV TERM 3333 2159004 - 2158984 - R 100 -9.8 -5.40072 | opp_overlap 2158984 CTTTCCTCAAAAAAA CCTTCTCT AAAAA AGAGAAGG TTTCACAAATTACAC TERM 3334 2158984 - 2159004 + r 80 -9.8 -3.57561 | opp_overlap 2158984 CTTTCCTCAAAAAAA CCTTCTCT AAAAA AGAGAAGG TTTCACAAATTACAC cynD 2160021 - 2159014 - | cyanide dihydratase TERM 3335 2159240 - 2159220 - G 78 -9.7 -3.44146 | TGTCTGCATAAGCAA TTCCCTCTG TTT CAGCGGGAA CCATATCACTGATCG yqzJ 2160187 - 2160468 + | hypothetical protein TERM 3336 2160588 - 2160605 + G 72 -6.3 -4.30995 | AACGAATGCGAGCTC TGATGGG TTTT TCCATCA TTATTTTGTCCAGCC oxaA2 2160496 - 2161314 + | OxaA-like protein precursor TERM 3337 2161318 - 2161347 + T 100 -18.1 -2.59431 | opp_overlap 2161318, overlap 2161321 GCTGCTGAATAAAAA TAACCCCCTTATC ATTT GATAAGGGGGTTA TAGATTGTGGACAAA TERM 3338 2161347 - 2161318 - T 100 -18.1 -5.06414 | opp_overlap 2161318 2161321 GCTGCTGAATAAAAA TAACCCCCTTATC ATTT GATAAGGGGGTTA TAGATTGTGGACAAA TERM 3339 2161321 - 2161344 + T 100 -15.4 -3.45054 | opp_overlap 2161318, overlap 2161318 GCTGAATAAAAATAA CCCCCTTATC ATTT GATAAGGGGG TTATAGATTGTGGAC TERM 3340 2161354 - 2161398 + T 100 -17.5 -4.24948 | opp_overlap 2161363, overlap 2161357 2161363 AGGGGGTTATAGATT GTGGACAAAGTGCTAAAATGA TCT TTATTTTAGCACTTTGTCTTC TTTTCAGTGTGATAG TERM 3341 2161357 - 2161395 + T 100 -20 -4.23999 | opp_overlap 2161363, overlap 2161354 2161363 GGGTTATAGATTGTG GACAAAGTGCTAAAATGA TCT TTATTTTAGCACTTTGTC TTCTTTTCAGTGTGA TERM 3342 2161389 - 2161363 - T 81 -9.6 -3.87373 | opp_overlap 2161357 2161354 2161363 TAGATTGTGGACAAA GTGCTAAAATGA TCT TTATTTTAGCAC TTTGTCTTCTTTTCA TERM 3343 2161363 - 2161389 + T 100 -11.8 -4.45253 | opp_overlap 2161363, overlap 2161357 2161354 TAGATTGTGGACAAA GTGCTAAAATGA TCT TTATTTTAGCAC TTTGTCTTCTTTTCA TERM 3344 2161525 - 2161548 + T 100 -14 -4.99043 | TGTCTACACGCTGAA TCCCCTTATC ATTT GATAAGGGGA TTTTCTTTATGCCAA BPUM_2129 2162019 - 2161555 - | chemotaxis signal transduction protein yqjE 2163155 - 2162034 - | M20B subfamily peptidase TERM 3345 2163180 - 2163193 + r 83 -6.7 -5.04385 | overlap 2163179 2163178 CCTCCTCTTATAGCG GCATG TTGC CATGC TTTTTTAACGGTCTA yqjD 2164641 - 2163172 - | propionyl-CoA carboxylase beta subunit yqjC 2165050 - 2164628 - | glyoxalase/bleomycin resistance protein/dioxygenase family protein TERM 3346 2164826 - 2164839 + gH 73 -3.8 -5.06414 | overlap 2164822 2164825 TAACGCAATATGATG GAGG CCCTCT CCTC TTTTTGTTAAAAAAG BPUM_2133 2165042 - 2165245 + | hypothetical protein TERM 3347 2165306 - 2165260 - TR 70 -8.1 -3.37877 | opp_overlap 2165262 2165268 2165298, overlap 2165259 2165262 AGGTTTTAATAAAAG CAGACAAGCAGGTGATTCGTT CAATC AACGAATGGCCTGTTTGTCTT TGGCAAGCTTTTCAA TERM 3348 2165262 - 2165304 + Tr 100 -15.1 -3.57309 | opp_overlap 2165260 2165259 2165262, overlap 2165268 2165298 GTTTTAATAAAAGCA GACAAGCAGGTGATTCGTT CAATC AACGAATGGCCTGTTTGTC TTTGGCAAGCTTTTC TERM 3349 2165304 - 2165262 - TR 79 -10.7 -3.25538 | opp_overlap 2165262 2165268 2165298, overlap 2165260 2165259 GTTTTAATAAAAGCA GACAAGCAGGTGATTCGTT CAATC AACGAATGGCCTGTTTGTC TTTGGCAAGCTTTTC TERM 3350 2165268 - 2165298 + Tr 83 -9.1 -4.32857 | opp_overlap 2165262 2165260 2165259, overlap 2165262 ATAAAAGCAGACAAG CAGGTGATTCGTT CAATC AACGAATGGCCTG TTTGTCTTTGGCAAG BPUM_2134 2165793 - 2165284 - | hypothetical protein TERM 3351 2165844 - 2165787 - G 71 -2.3 -5.18371 | gap 3 CGGTATAAAATAAAA GACGCATAGGCTCCTCCTTTTTCATTAG ATTGA CCAATGAA---GGAGAAACTCATGCGTC TCTATTCTTTCATCC yqjA 2166799 - 2165846 - | hypothetical protein TERM 3352 2166779 - 2166789 + g 71 -6.8 -4.12456 | overlap 2166754 TGCTGTTTTCAGCGT TCGG TAG CCGA TTTTAAACATGATGT TERM 3353 2166886 - 2166912 + r 72 -5.9 -4.39652 | opp_overlap 2166888, overlap 2166883 2166888 CATTATAATCAAAAA AAGAAGGAGAT GTTAA GTCTCCTTCTC TTATTTCTTTATAAT TERM 3354 2166910 - 2166888 - R 100 -7.8 -5.68023 | opp_overlap 2166888 2166886 2166883 TTATAATCAAAAAAA GAAGGAGA TGTTAAG TCTCCTTC TCTTATTTCTTTATA TERM 3355 2166888 - 2166910 + r 75 -8.5 -3.78321 | opp_overlap 2166888, overlap 2166886 2166883 TTATAATCAAAAAAA GAAGGAGAT GTTAA GTCTCCTTC TCTTATTTCTTTATA yqiZ 2167643 - 2166921 - | ABC transporter ATP-binding protein TERM 3356 2167405 - 2167435 + g 71 -4 -4.84529 | overlap 2167417 2167418 TGTTGAAATACCATT CCGATGTTCTCA CGCACTT TGAGTGCATTGG TTTTTGGGTTTGTGA yqiY 2168328 - 2167636 - | ABC transporter ATP-binding protein TERM 3357 2168374 - 2168338 - R 75 -2.4 -5.47846 | gap 1, opp_overlap 2168348 2168357, overlap 2168348 AATCAAAAAATAAAA CAGGAAAAAAGTTCAAC ATGA GTTGAACTTTTCAGC-G CTTTCTACTGAATTT TERM 3358 2168365 - 2168348 - R 100 -8.5 -5.36314 | opp_overlap 2168348 2168357, overlap 2168338 TAAAACAGGAAAAAA GTTCAAC ATGA GTTGAAC TTTTCAGCGCTTTCT TERM 3359 2168348 - 2168365 + r 79 -8.5 -4.13343 | opp_overlap 2168348 2168338, overlap 2168357 TAAAACAGGAAAAAA GTTCAAC ATGA GTTGAAC TTTTCAGCGCTTTCT yqiX 2169183 - 2168419 - | amino acid ABC transporter ATP-binding protein TERM 3360 2168575 - 2168586 + g 71 -3 -5.0538 | opp_overlap 2168563, overlap 2168563 CAATCCAAAGGCTTG GAAA TCTT TTTC TTTTTTCAAATAACC TERM 3361 2169324 - 2169349 + r 79 -8.9 -4.15632 | opp_overlap 2169324 CTTATAAAACAAAAA GCAGACCGATC TAAA GACCGGACTGC TTTATATGTCATCAT TERM 3362 2169349 - 2169324 - R 100 -11.1 -5.54907 | opp_overlap 2169324 CTTATAAAACAAAAA GCAGACCGATC TAAA GACCGGACTGC TTTATATGTCATCAT yqiW 2169816 - 2169379 - | hypothetical protein bmrU 2169987 - 2170880 + | diacylglycerol kinase TERM 3363 2170888 - 2170911 + T 100 -6 -5.90981 | opp_overlap 2170888 CAGAATAAAGAAAAC GCCCGAGA TCATTCTT TTTCGGGC TTTTTTTTGATATAG yesK 2171288 - 2170896 - | hypothetical protein TERM 3364 2171187 - 2171175 - GT 81 -4.1 -5.30575 | TAAAAATGCAAAAAA GTCTA GTC CAGAC ATATCATCGCTCCTT TERM 3365 2171213 - 2171248 + gT 79 -7.5 -4.25256 | opp_overlap 2171218, overlap 2171210 2171217 TCCTTCTCATCATGG GGAAATCCCCCTCTC CATAGC GGGAGGGGGACATTC TTGTTTTAGTAAACA TERM 3366 2171217 - 2171244 + gT 70 -9.1 -3.13405 | opp_overlap 2171218, overlap 2171213 2171210 TCTCATCATGGGGAA ATCCCCCTCTC CATAGC GGGAGGGGGAC ATTCTTGTTTTAGTA TERM 3367 2171243 - 2171218 - GT 93 -11.9 -3.58343 | gap 1, opp_overlap 2171217 2171213 2171210 CTCATCATGGGGAAA TCCCCCTCTCCA TAG CGG-GAGGGGGA CATTCTTGTTTTAGT bfmBB 2172510 - 2171254 - | branched-chain alpha-keto acid dehydrogenase subunit E2 bfmBAB 2173512 - 2172529 - | 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) beta subunit bfmBAA 2174517 - 2173525 - | 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) alpha subunit bfmBC 2175959 - 2174535 - | dihydrolipoamide dehydrogenase buk 2177070 - 2175949 - | butyrate kinase TERM 3368 2176595 - 2176607 + g 79 -3.4 -5.30616 | GCTTTTTGATTTAAT GCAT GGAAG ATGC TTTTTCTTTCAATCG bcd 2178198 - 2177104 - | leucine dehydrogenase TERM 3369 2177412 - 2177437 + g 71 -6.9 -4.08317 | gap 1, opp_overlap 2177436 GCGTTTCTCTCAGCT GGTTATTCGCTG CAC CTGCGA-TAACC TTTGCTTTCAGCTTA BPUM_2148 2179117 - 2178224 - | phosphate butyryltransferase rocR 2181316 - 2179244 - | transcriptional regulator TERM 3370 2181055 - 2181066 + g 85 -4.4 -5.4833 | opp_overlap 2181055 AACTTGGAACAATGA CAGA CTGC TCTG TTTTTTCTTCCATCA TERM 3371 2181119 - 2181136 + g 74 -4.9 -4.74989 | GCCCGTTGTTTCGAT GATGATA TCAA TGTCATC TTTTATGTATTCTTT yqzF 2181466 - 2181702 + | hypothetical protein TERM 3372 2181747 - 2181704 - T 83 -9 -4.24623 | opp_overlap 2181706 2181715, overlap 2181706 2181715 TTAAACAGAGATAAA CATGAAAAAAAGACCCGCTA TTGA TCGCAGGTCTTTATTTCATT TCTTCTCTTATTTTG TERM 3373 2181706 - 2181745 + T 88 -9.4 -4.53119 | opp_overlap 2181706 2181704 2181715, overlap 2181715 AAACAGAGATAAACA TGAAAAAAAGACCCGCTA TTGA TCGCAGGTCTTTATTTCA TTTCTTCTCTTATTT TERM 3374 2181745 - 2181706 - T 85 -11.6 -3.70694 | opp_overlap 2181706 2181715, overlap 2181704 2181715 AAACAGAGATAAACA TGAAAAAAAGACCCGCTA TTGA TCGCAGGTCTTTATTTCA TTTCTTCTCTTATTT TERM 3375 2181736 - 2181715 - T 90 -6.5 -5.66989 | opp_overlap 2181706 2181715, overlap 2181706 2181704 TAAACATGAAAAAAA GACCCGCTA TTGA TCGCAGGTC TTTATTTCATTTCTT glpQ 2182475 - 2181738 - | glycerophosphodiester phosphodiesterase TERM 3376 2182582 - 2182559 - R 89 -3.9 -5.74122 | opp_overlap 2182559 GAGCACATAAAAAAA CCTCTTC TGATGAGTAC GAAGAGG TTCTGTATAAATTCG BPUM_2152 2183806 - 2182706 - | hypothetical protein BPUM_2153 2184084 - 2183794 - | hypothetical protein TERM 3377 2184244 - 2184227 - R 100 -4.1 -6.09196 | TCCAAAATAAAAAAA CGCCTCT TTGA AGAAACG TTTTTTTATGAAAAT spo0A 2185066 - 2184263 - | stage 0 sporulation protein A TERM 3378 2185343 - 2185323 - R 100 -5.4 -5.94214 | opp_overlap 2185323 2185340 AAGAGAAGAAAAAAA CTGCCG GAAAATGCG CGGCAG TTTGATAATCAGCTT TERM 3379 2185340 - 2185360 + r 100 -2.5 -6.12458 | opp_overlap 2185323, overlap 2185323 GCCGGAAAATGCGCG GCAGTTTGA TAA TCAGCTTGC TTTTTTGTTTTTTTG spoIVB 2186629 - 2185352 - | stage IV sporulation S55 family serine peptidase TERM 3380 2186214 - 2186224 + g 71 -3.2 -5.07567 | overlap 2186209 TGAATGCCTGCGGCT TCGC CTG GTGA TTTTTTGCCGTCTGC TERM 3381 2186832 - 2186811 - R 100 -8 -5.53436 | opp_overlap 2186811 2186810 ACACAATATAAAAAA GGCAGCTG GTTTTT CAGCTACC CTGTTGTTTTGACAT recN 2188564 - 2186828 - | DNA repair protein RecN TERM 3382 2188486 - 2188498 + g 71 -4.8 -4.62069 | CTGTTTCCCCCGTTA GGAC CGTGA GTCC TTTTTCAAATGAAAC ahrC 2189047 - 2188598 - | arginine repressor TERM 3383 2189034 - 2189046 + g 71 -3.4 -5.00884 | ATCTTAATATGCCTT TGAC CTTTA GTCA TTTTTTGACCCCCCT TERM 3384 2189166 - 2189199 + r 83 -11.3 -3.5882 | opp_overlap 2189171, overlap 2189171 ATCTTTTGACCATGT AAAAAGGAATAATAG CGAG CTATTATTCCTTTTG TTTCAACCTCATGTG TERM 3385 2189171 - 2189194 + r 93 -11.2 -4.87803 | opp_overlap 2189171, overlap 2189166 TTGACCATGTAAAAA GGAATAATAG CGAG CTATTATTCC TTTTGTTTCAACCTC TERM 3386 2189194 - 2189171 - R 90 -11.2 -4.68593 | opp_overlap 2189171 2189166 TTGACCATGTAAAAA GGAATAATAG CGAG CTATTATTCC TTTTGTTTCAACCTC yqxC 2190062 - 2189208 - | hemolysin A dxs 2191960 - 2190059 - | 1-deoxy-D-xylulose-5-phosphate synthase TERM 3387 2191104 - 2191114 + g 82 -6.8 -4.88217 | TTATCGGATTCTGCC GGCT GAT AGCC TTTTCCTTTTTTCGT TERM 3388 2191968 - 2191954 - G 73 -5.7 -4.42386 | overlap 2191932 TTTTTATTGATAAAA GATCC AATTA GGATC AACTCGCTTTCAACA yqiD 2193001 - 2192111 - | geranyltranstransferase xseB 2193251 - 2192991 - | exodeoxyribonuclease VII small subunit xseA 2194594 - 2193248 - | exodeoxyribonuclease VII large subunit TERM 3389 2194660 - 2194618 - R 89 -10.6 -4.56597 | overlap 2194619 2194622 CCTCCTCTTCAAAAA CGCACATTCATCCACCAGCA GCA TGCAGGTGGATGAATGGATA AAGCTTATGCTAATG TERM 3390 2194658 - 2194619 - R 95 -13 -3.33744 | gap 1, overlap 2194618 2194622 CTCCTCTTCAAAAAC GCACATTCATCCACCAGCA GCA TGCAGGTGGATGAATG-GA TAAAGCTTATGCTAA TERM 3391 2194656 - 2194622 - R 100 -20.2 -2.83903 | overlap 2194619 2194618 CTCTTCAAAAACGCA CATTCATCCACCAGCA GCA TGCAGGTGGATGAATG GATAAAGCTTATGCT folD 2195516 - 2194665 - | bifunctional methylenetetrahydrofolate dehydrogenase (NADP(+))/methenyltetrahydrofolate cyclohydrolase TERM 3392 2195419 - 2195429 + g 91 -6.8 -5.48213 | opp_overlap 2195419 ATAACGGCAAGACCA GGTG TGA CACC TTTTTGTTTTAGCTC nusB 2195923 - 2195528 - | transcription antitermination protein NusB TERM 3393 2196070 - 2196083 + r 71 -8.1 -3.53012 | opp_overlap 2196069 2196081 TATGATTCGGAAATG GCCCA AAAA TGGGC TTTAAAAAACCAAAG TERM 3394 2196093 - 2196115 + r 90 -12 -3.76393 | opp_overlap 2196081 2196093 ATGGGCTTTAAAAAA CCAAAGAGGC GAT GCCTCCTTGG TTTCACTTGAACTCT TERM 3395 2196115 - 2196093 - R 100 -14.2 -5.00884 | opp_overlap 2196093, overlap 2196081 ATGGGCTTTAAAAAA CCAAAGAGGC GAT GCCTCCTTGG TTTCACTTGAACTCT yqhY 2196541 - 2196134 - | hypothetical protein TERM 3396 2196475 - 2196487 + g 79 -7.7 -4.36411 | CTTCAATCACTTCTG GTGCA ATT TGCAC TTTTCCTAATTGATC accC 2197916 - 2196567 - | acetyl-CoA carboxylase biotin carboxylase subunit accB 2198410 - 2197928 - | acetyl-CoA carboxylase biotin carboxyl carrier protein subunit TERM 3397 2198566 - 2198602 + r 90 -6.6 -5.5604 | opp_overlap 2198562 2198574, overlap 2198573 GGGCGTCAAACCGCT TGAAAAAACGCCCTTT TCGGC AAAGGGCGCCTGTTCA TTTTTTATTCGTTAG TERM 3398 2198594 - 2198574 - R 93 -11.2 -5.01732 | opp_overlap 2198573 2198566, overlap 2198562 AACCGCTTGAAAAAA CGCCCTTT TCGGC AAAGGGCG CCTGTTCATTTTTTA spoIIIAH 2199242 - 2198607 - | stage III sporulation protein AH TERM 3399 2199217 - 2199227 + g 85 -4 -5.44721 | AGCATCGTTAATAGC CAAA CCG TTTG TTTTTTTAACATCAT spoIIIAG 2199910 - 2199239 - | stage III sporulation protein AG spoIIIAF 2200535 - 2199903 - | stage III sporulation protein AF spoIIIAE 2201743 - 2200550 - | stage III sporulation protein AE TERM 3400 2201475 - 2201465 - G 74 -6.8 -4.38203 | opp_overlap 2201464 CAGATAATGAACAAA GGCT TTC AGCC ATGTCTGGGGAGACA spoIIIAD 2202071 - 2201763 - | stage III sporulation protein AD spoIIIAC 2202379 - 2202173 - | stage III sporulation protein AC spoIIIAB 2202914 - 2202399 - | stage III sporulation protein SpoAB spoIIIAA 2203831 - 2202908 - | stage III sporulation protein AA TERM 3401 2203701 - 2203687 - G 82 -8.6 -4.30719 | opp_overlap 2203686 2203684 2203687 TTGTGTGATAAGAAA GAAAGC GCG GCTTTC CTCTTTGCATTAATT yqhV 2204179 - 2203898 - | hypothetical protein TERM 3402 2204344 - 2204320 - R 100 -11.6 -5.88565 | TTTACAATAAAAAAA GACTGTAAAC ACAAG GTTTACAGTC TCAGCGCGTAGACAA TERM 3403 2204511 - 2204473 - R 100 -21.4 -3.91716 | opp_overlap 2204479, overlap 2204479 TCACGCTGTAAAGAA GACAAAGGGCTAAAATAA AGA TCATTTTAGCCCTTTGTC AACAACCTGAAGACT TERM 3404 2204479 - 2204505 + r 84 -11 -3.86015 | opp_overlap 2204473 2204479 TGTAAAGAAGACAAA GGGCTAAAATAA AGA TCATTTTAGCCC TTTGTCAACAACCTG TERM 3405 2204505 - 2204479 - R 100 -13.2 -4.40333 | opp_overlap 2204479, overlap 2204473 TGTAAAGAAGACAAA GGGCTAAAATAA AGA TCATTTTAGCCC TTTGTCAACAACCTG TERM 3406 2204523 - 2204547 + r 93 -11.6 -4.34737 | opp_overlap 2204525 TGTCAACAACCTGAA GACTGTAAAC ACAAG GTTTACAGTC TTTCTTCGTTCCTAC efp 2205116 - 2204559 - | elongation factor P yqhT 2206203 - 2205142 - | M24B subfamily peptidase aroQ 2206643 - 2206200 - | 3-dehydroquinate dehydratase yqhR 2207279 - 2206752 - | hypothetical protein TERM 3407 2207536 - 2207520 - g 95 -8 -4.99947 | TCCAATCAAACAAAA CCTCCA GCATA TGGAGG GCAAGCAGTTGTCGA yqhQ 2207502 - 2208458 + | hypothetical protein TERM 3408 2208853 - 2208828 - g 76 -2.5 -5.26119 | overlap 2208830 2208834 TTCTCAAAAAGAAAA GCCAAACACAG TTAA CTGTGATTGAA GGCAAGAAAAACAAA yqhP 2208497 - 2208892 + | hypothetical protein yqhO 2209764 - 2208889 - | esterase TERM 3409 2209839 - 2209861 + r 93 -10.6 -5.10208 | opp_overlap 2209839 AACTTTAATCAAAAA GGACACCC ATGCTGA GGGTGTCC TTTTTCTTAAGATTC TERM 3410 2209861 - 2209839 - R 93 -10.6 -4.87893 | opp_overlap 2209839 AACTTTAATCAAAAA GGACACCC ATGCTGA GGGTGTCC TTTTTCTTAAGATTC BPUM_2184 2210302 - 2209868 - | manganese transport transcriptional regulator TERM 3411 2210384 - 2210370 - R 70 -2.8 -5.14563 | opp_overlap 2210370 TCGCCCATTAAAAAA CAAGGA GTG TCCTTT GTCTTTAACGCTTGT BPUM_2185 2211225 - 2210389 - | lipoate protein ligase A TERM 3412 2210688 - 2210700 + g 80 -4.8 -5.23765 | AGATGGAGCCGTGCT GGAG GATCA CTCC TTTTTGTCTTGTTTG TERM 3413 2211809 - 2211797 - g 71 -3.3 -5.00616 | GGCGGCTTTAAAAAA TGGGG CGG CCGCA TCAAAACGAAGAACT yqhL 2211440 - 2211826 + | hypothetical protein TERM 3414 2211834 - 2211861 + T 88 -3.5 -5.7827 | gap 1, opp_overlap 2211834 AGAACTAACAAAAAA GACTC-TGGG AGCATGATC CCCATGAGTC TTTTTTCTTTATCTT TERM 3415 2211861 - 2211834 - T 84 -4.2 -5.57396 | gap 1, opp_overlap 2211834 AGAACTAACAAAAAA GACTC-TGGGA GCATGAT CCCCATGAGTC TTTTTTCTTTATCTT gcvPB 2213360 - 2211870 - | glycine dehydrogenase subunit 2 TERM 3416 2212772 - 2212804 + gT 83 -11.3 -3.05463 | opp_overlap 2212776 2212777, overlap 2212776 2212777 CAACGGTAATGGTTT CAAATCCAGCCACTG TCG CAGATGCTGGGTTTG TTCCATGGGCAGAAT TERM 3417 2212776 - 2212800 + gT 70 -6.3 -4.20516 | opp_overlap 2212776 2212777, overlap 2212772 2212777 GGTAATGGTTTCAAA TCCAGCCACTG TCG CAGATGCTGGG TTTGTTCCATGGGCA gcvPA 2214666 - 2213320 - | glycine dehydrogenase subunit 1 TERM 3418 2214047 - 2214066 + gr 91 -7.9 -4.91109 | TGCACAAGAACGGCT GCTGTCT CGTCGC AGACAGC TTTTTCTAATGCCGC gcvT 2215780 - 2214683 - | aminomethyltransferase TERM 3419 2214971 - 2214985 + g 79 -8.6 -4.13814 | CTTGAGCGCTTCTTT GCCAAT AAA ATTGGC TTCTTTATCCGTTTT TERM 3420 2215892 - 2215853 - H 100 -10.2 -5.2422 | gap 1, opp_overlap 2215856 AATCACAGCAAAAAA GGACAGAGCGCTCCCTTTT ATC AAAAAGAAGT-CTCTGTCC TTGCACCTGAAAGTT yqhH 2216342 - 2218012 + | SNF2 family helicase yqhG 2218027 - 2218824 + | hypothetical protein TERM 3421 2218841 - 2218814 - f 73 -2.7 -5.22312 | gap 2, opp_overlap 2218815 2218816, overlap 2218816 ACTTACAGCAAAAAA GAGGAGGCTGACC TATA GGTCC-CCTCC-C TTTCATGTGACGTAC TERM 3422 2218840 - 2218816 - f 73 -6.4 -4.23988 | gap 1, opp_overlap 2218815 2218816, overlap 2218814 TTACAGCAAAAAAGA GGAGGCTGACC TATA GGTCC-CCTCC CTTTCATGTGACGTA sinI 2219007 - 2219171 + | SinR antagonist sinR 2219205 - 2219540 + | transcriptional regulator SinR TERM 3423 2219573 - 2219525 - T 79 -4.6 -5.25803 | gap 1, overlap 2219532 AATCTGGAGAAAAAA GCAAGAAGAGGAGTAAAGCGC ACATTTTA GCGCAT-ACTCCTCCAATTGC TATGCAGAACTTGAT TERM 3424 2219566 - 2219532 - T 71 -6.5 -4.08846 | gap 1, overlap 2219525 AGAAAAAAGCAAGAA GAGGAGTAAAGCGC ACATTTTA GCGCAT-ACTCCTC CAATTGCTATGCAGA TERM 3425 2219596 - 2219610 + T 76 -2.9 -5.48063 | overlap 2219591 AACTTGATATCAGCC TAAAG ACTGG CTTTA TTTTTTATCTTCGCT cotN 2220408 - 2219608 - | translocation-dependent anti spore component TERM 3426 2219786 - 2219810 + g 74 -8 -3.97308 | TCTTTATCCTTCGTC TGGTCATTGA CAAAT TCAATGATCA TTTCCATTTTATCGT sipW 2221038 - 2220466 - | signal peptidase yqxM 2221617 - 2221090 - | hypothetical protein yqzG 2221869 - 2222195 + | hypothetical protein TERM 3427 2222211 - 2222226 + T 80 -6 -5.0925 | opp_overlap 2222212, overlap 2222212 AGAGGCATAAAAAAA ACCGCC TGCT GGCGGC TTTTTACTTTTGACG TERM 3428 2222212 - 2222225 + T 78 -9.5 -3.64465 | opp_overlap 2222212, overlap 2222211 GAGGCATAAAAAAAA CCGCC TGCT GGCGG CTTTTTACTTTTGAC TERM 3429 2222225 - 2222212 - T 100 -9.5 -5.96219 | opp_overlap 2222211 2222212 GAGGCATAAAAAAAA CCGCC TGCT GGCGG CTTTTTACTTTTGAC yqzE 2222424 - 2222230 - | hypothetical protein BPUM_2199 2222867 - 2222484 - | hypothetical protein comGF 2223313 - 2222864 - | competence protein GF comGE 2223620 - 2223303 - | competence protein GE comGD 2223999 - 2223604 - | competence protein GD comGC 2224336 - 2224043 - | competence protein GC comGB 2225393 - 2224353 - | competence protein GB TERM 3430 2224797 - 2224812 + g 71 -9 -3.30243 | opp_overlap 2224796 TAAAAAAGGAAATCT GCTGAG TACT CTCAGC TTCTCAAGGGTGGAT TERM 3431 2225227 - 2225209 - G 75 -3 -5.16133 | overlap 2225210 AGCACAATATAAAAA GGCTCCCC TTC GAGCAACC ACTGAATGCCCGGTG comGA 2226444 - 2225374 - | competence protein GA TERM 3432 2225852 - 2225871 + g 74 -4.3 -5.04222 | gap 1, opp_overlap 2225840, overlap 2225852 2225853 ATAGCACGTAATCCT GC-GGCAT ATGTG ATGCCGGC TTTTTCATTTACTTG TERM 3433 2226613 - 2226593 - R 93 -4.8 -5.71712 | gap 1, opp_overlap 2226593 2226581 GTGCATATAAAAAAA CCTG-ACTT TTAC AAGTACAGG TTTTTTGATCATGTT TERM 3434 2226593 - 2226613 + r 79 -4.8 -5.2112 | gap 1, opp_overlap 2226593, overlap 2226581 GTGCATATAAAAAAA CCTG-ACTT TTAC AAGTACAGG TTTTTTGATCATGTT yqhA 2227494 - 2226622 - | hypothetical protein TERM 3435 2227710 - 2227676 - R 86 -8 -4.9218 | gap 1, opp_overlap 2227676 CAGTCAGCACAAAAA CGAAGA-CGGCTGAA CAATGT TTCAGCTGATCTTCG TTTTTATTAGGAAAC TERM 3436 2227676 - 2227710 + r 93 -10.2 -5.06414 | gap 1, opp_overlap 2227676 CAGTCAGCACAAAAA CGAAGA-CGGCTGAA CAATGT TTCAGCTGATCTTCG TTTTTATTAGGAAAC TERM 3437 2227721 - 2227744 + r 75 -3.2 -5.243 | CTTCGTTTTTATTAG GAAACTGATT GATG AATCGCTTTC TTTTTTGATAATTTC yqgZ 2228097 - 2227717 - | ArsC family transcription regulator TERM 3438 2228181 - 2228193 + H 78 -3.5 -5.39755 | ACACGTTTTGATCAC TTTTT CAA AAAAA TTTTTTCTACTTGTA TERM 3439 2228406 - 2228416 + G 79 -6.8 -4.69512 | ATCGTTGCTGTTCTT CGGT CAA ACCG TTCTTTTTGTATTTT yqgY 2228311 - 2228553 + | hypothetical protein TERM 3440 2228564 - 2228585 + T 89 -5.9 -5.54894 | opp_overlap 2228564, overlap 2228553 ATTAATTGAAAAAAA GCATCTC AATCAAAA GAGATGC TTTTTTTCATACATT TERM 3441 2228585 - 2228564 - T 89 -5.9 -5.54192 | opp_overlap 2228564 2228553 ATTAATTGAAAAAAA GCATCTC AATCAAAA GAGATGC TTTTTTTCATACATT TERM 3442 2228626 - 2228613 - T 81 -5.3 -5.20783 | opp_overlap 2228613 ATTTAAAGAGAAAAA CCATT GATA AATGG ATTTTGTTCCTGCTC yqgX 2229244 - 2228600 - | hypothetical protein yqgW 2229372 - 2229569 + | hypothetical protein TERM 3443 2229588 - 2229572 - T 85 -9.4 -4.35518 | opp_overlap 2229572 AACTGCACATTAAAA GCCTGC TATTT GCAGGC TTTTTAAATGATTGA TERM 3444 2229572 - 2229588 + T 90 -9.4 -4.7078 | opp_overlap 2229572 AACTGCACATTAAAA GCCTGC TATTT GCAGGC TTTTTAAATGATTGA TERM 3445 2229643 - 2229598 - T 81 -11.5 -2.72144 | gap 1, opp_overlap 2229602 2229608, overlap 2229600 2229608 GCAGGCTTTTTAAAT GATTGACAAAGGGCTAAAAT GGTTTTT ATTTTAGCCCTTTGTCT-TC TTTTCAGCGTGATAT TERM 3446 2229642 - 2229600 - T 79 -10.8 -2.90615 | opp_overlap 2229602 2229608, overlap 2229598 2229608 AGGCTTTTTAAATGA TTGACAAAGGGCTAAAAT GGTTTTT ATTTTAGCCCTTTGTCTT CTTTTCAGCGTGATA TERM 3447 2229602 - 2229640 + T 100 -19.2 -4.18506 | opp_overlap 2229600 2229598 2229608, overlap 2229608 GCTTTTTAAATGATT GACAAAGGGCTAAAATGG TTT TTATTTTAGCCCTTTGTC TTCTTTTCAGCGTGA TERM 3448 2229608 - 2229634 + T 90 -11 -4.45253 | opp_overlap 2229608 2229600 2229598, overlap 2229602 TAAATGATTGACAAA GGGCTAAAATGG TTT TTATTTTAGCCC TTTGTCTTCTTTTCA TERM 3449 2229634 - 2229608 - T 81 -9.6 -3.96224 | opp_overlap 2229602 2229608, overlap 2229600 2229598 TAAATGATTGACAAA GGGCTAAAAT GGTTTTT ATTTTAGCCC TTTGTCTTCTTTTCA TERM 3450 2229788 - 2229772 - T 78 -9.4 -3.5944 | opp_overlap 2229772 ATCTACATGCTGAAA GCCTGC ATAGA GCAGGC TTTTTTTATTGATTC TERM 3451 2229772 - 2229788 + T 100 -9.4 -5.87996 | opp_overlap 2229772 ATCTACATGCTGAAA GCCTGC ATAGA GCAGGC TTTTTTTATTGATTC yqgV 2230108 - 2229794 - | hypothetical protein yvqJ2 2231641 - 2230187 - | major facilitator transporter TERM 3452 2231570 - 2231604 + gr 84 -11.6 -3.13343 | opp_overlap 2231571 2231580, overlap 2231580 TTGCTTCATGTTCAA ATGTAAAAAAGCACCT GAC AGGTGCTTTTTAACAC TTACATGCTTCCCAT TERM 3453 2231603 - 2231571 - GR 100 -15.1 -3.57144 | opp_overlap 2231570 2231580, overlap 2231580 TGCTTCATGTTCAAA TGTAAAAAAGCACCT GAC AGGTGCTTTTTAACA CTTACATGCTTCCCA TERM 3454 2231580 - 2231594 + gr 100 -10 -4.62471 | opp_overlap 2231580 2231571, overlap 2231570 TTCAAATGTAAAAAA GCACCT GAC AGGTGC TTTTTAACACTTACA TERM 3455 2231594 - 2231580 - GR 100 -10 -5.22039 | opp_overlap 2231570 2231580, overlap 2231571 TTCAAATGTAAAAAA GCACCT GAC AGGTGC TTTTTAACACTTACA yqgT 2232722 - 2231598 - | M14 family gamma-D-glutamyl-{L}-meso-diaminopimelate peptidase 1 TERM 3456 2232342 - 2232360 + gr 72 -9.6 -2.85699 | opp_overlap 2232340 2232341, overlap 2232341 AATAGAATGTAAATG CTGAACAG GCT CTGTTCGG ATTTCATAAATAGGT TERM 3457 2232801 - 2232767 - R 100 -7.4 -5.71712 | gap 1, opp_overlap 2232767 TGGCAGACAAAAAAA GAAAACCTCTG-CAT GTAAAA ATAACAGAGGTTTTC TCATATGTTAGGACG yqgS 2234728 - 2232809 - | phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase TERM 3458 2233533 - 2233565 + g 83 -11.3 -3.02511 | opp_overlap 2233533, overlap 2233516 2233511 AATCTCGTATAGAAA GGCTGCGGGATTGAT TTC ATCAATTCCGCTGAC TGTTCAAAGAATGGA TERM 3459 2233565 - 2233533 - G 80 -9.1 -4.03978 | opp_overlap 2233516 2233511 2233533 AATCTCGTATAGAAA GGCTGCGGGATTGAT TTC ATCAATTCCGCTGAC TGTTCAAAGAATGGA TERM 3460 2233719 - 2233692 - G 75 -8.6 -3.86346 | overlap 2233716 TCACGGTTCCAGAAA CTTTTGTTATTC GCAT GAATAACAGAAG AATGGTACCCTTCAT TERM 3461 2234251 - 2234241 - G 76 -6.8 -4.57581 | AGGTTAAAGAAGAAA GTGG CTG CCAC AAATAAATAATACGC glcK 2235895 - 2234942 - | glucokinase yqgQ 2236124 - 2235909 - | hypothetical protein yqgP 2237721 - 2236183 - | peptidase TERM 3462 2236335 - 2236347 + g 75 -3.4 -5.09225 | GATACAGTTTATTTG GATC ATCTG GATC TTTTTTAAGTGACCT TERM 3463 2237807 - 2237791 - R 93 -5.1 -5.7946 | TTCTGAACAAAAAAA TCCCG GCGTTTG CGGGA TTAGAATGCTTGGCG yqgO 2237984 - 2237808 - | hypothetical protein TERM 3464 2238215 - 2238190 - R 83 -3.9 -5.5762 | opp_overlap 2238190 2238192, overlap 2238183 ATGAAACACAAAAAA GCCCGTTCTTT GGAC AATGAGCGGAC TTTTACCTTTGATAG yqgN 2238778 - 2238218 - | 5-formyltetrahydrofolate cyclo-ligase TERM 3465 2238825 - 2238805 - R 100 -11.9 -5.67063 | opp_overlap 2238805 2238804 2238807 CCCATCATAAAAAAA CAGCAGGAA AAT TCCCTGCTG CTTACTTTGTTTCAC TERM 3466 2238805 - 2238825 + r 74 -9.7 -2.84807 | opp_overlap 2238805, overlap 2238804 2238807 CCCATCATAAAAAAA CAGCAGGAA AAT TCCCTGCTG CTTACTTTGTTTCAC rpmGA 2238976 - 2238827 - | 50S ribosomal protein L33 TERM 3467 2239028 - 2239054 + H 71 -3.1 -5.03747 | gap 1, opp_overlap 2239028 2239030, overlap 2239031 ACCTAACTATAATAC CACTTCTAGCTT AGGA ATGCTAGAA-TG TTTTTTCACCAATTT TERM 3468 2239275 - 2239249 - H 91 -3.1 -5.98675 | overlap 2239251 TATAAAAAGAAAAAA GATGAAAAAAA GGTGA TTTTCTTCAGC AATTCCTTTTGAAAC yqzD 2239396 - 2239743 + | hypothetical protein yqzC 2239740 - 2240240 + | hypothetical protein TERM 3469 2240281 - 2240244 - T 100 -14.9 -4.31859 | opp_overlap 2240249, overlap 2240249 TTAACAAAATAACAA CAAAACCCCCTGGCGGC ACTG ACCTCCAGGGGGTTTTT CTTATCCAAATCGAC TERM 3470 2240249 - 2240276 + T 100 -14.1 -5.18726 | opp_overlap 2240244 2240249 AAAATAACAACAAAA CCCCCTGGCGG CACTGA CCTCCAGGGGG TTTTTCTTATCCAAA TERM 3471 2240276 - 2240249 - T 100 -14.8 -5.06116 | opp_overlap 2240249, overlap 2240244 AAAATAACAACAAAA CCCCCTGGCGGC ACTG ACCTCCAGGGGG TTTTTCTTATCCAAA pstBB 2241074 - 2240283 - | phosphate ABC transporter ATP-binding protein TERM 3472 2240746 - 2240759 + g 76 -6.7 -4.56775 | TCAAAGATTGACTGA GGGAA TGGA TTCCC TTTTTGAAACACCAT pstBA 2241892 - 2241080 - | phosphate ABC transporter ATP-binding protein pstA 2242800 - 2241916 - | phosphate ABC transporter ATP-binding protein pstC 2243726 - 2242800 - | phosphate ABC transporter ATP-binding protein TERM 3473 2243783 - 2243758 - R 90 -11.3 -4.43189 | opp_overlap 2243758, overlap 2243764 ATGAATGTCATAAAA GGAAAAGTGAA AAGC TCCACTTTTCC TTCATCAGCAATTCA TERM 3474 2243758 - 2243783 + r 70 -9.1 -3.15579 | opp_overlap 2243758 2243764 ATGAATGTCATAAAA GGAAAAGTGAA AAGC TCCACTTTTCC TTCATCAGCAATTCA pstS 2244723 - 2243806 - | phosphate ABC transporter ATP-binding protein TERM 3475 2244219 - 2244230 + g 81 -4.4 -5.32699 | AAGAGTCAGGTCTGT TCAC AAGA GTGA TTTTTTGGTCTTTCC TERM 3476 2244587 - 2244597 + g 70 -5.4 -4.42464 | ATGGTAATGGAACCT GATG CCT CATC TTTGTTTGAAGCATT TERM 3477 2244901 - 2244919 + r 74 -5.9 -4.65895 | opp_overlap 2244901 GAAAACGTAAAAAAA CGCCCAC AAAAA GTGAGCG TTTTTACCTAGAAAA TERM 3478 2244919 - 2244901 - R 100 -8.1 -5.61824 | opp_overlap 2244901 GAAAACGTAAAAAAA CGCCCAC AAAAA GTGAGCG TTTTTACCTAGAAAA pbpA 2247139 - 2244938 - | penicillin-binding protein 2A TERM 3479 2246706 - 2246718 + g 85 -4.1 -5.55664 | CAGAAATCTTTTTTG TCACG ATC TGTGA TTTTTTTCGTACTCA TERM 3480 2247132 - 2247102 - G 79 -6.9 -4.70887 | opp_overlap 2247126, overlap 2247081 CTATCAAGAAAGAAA TGGCACCCCTTTT TGTGT ATAAAAGGTGCCA TCATCATTTTAGCGG yqgE 2248482 - 2247196 - | major facilitator superfamily sugar transporter TERM 3481 2247834 - 2247846 + g 74 -7.7 -4.02707 | TCCTACGCCAATTCT CGTCA GCA TGACG TTCTTTCCATATTTG TERM 3482 2247965 - 2247939 - G 93 -2.2 -6.09196 | overlap 2247947 GTGAAAACAAAAAAA GCGATAACGTGA AAA TCACCGTATAGC CTGTATCATCTGTTA TERM 3483 2248595 - 2248555 - R 86 -10 -4.28589 | gap 1, opp_overlap 2248563, overlap 2248557 2248563 AAAAAGGAGGGAAAA TATAAAAAGACCTGCTTCT CTAA AGA-GCAGGTCTTTTCAAA TCAAATGATTTATTT TERM 3484 2248593 - 2248557 - R 95 -12.6 -3.72347 | gap 1, opp_overlap 2248563, overlap 2248555 2248563 AAAGGAGGGAAAATA TAAAAAGACCTGCTTCT CTAA AGA-GCAGGTCTTTTCA AATCAAATGATTTAT TERM 3485 2248587 - 2248563 - R 100 -9.4 -5.28983 | gap 1, opp_overlap 2248563, overlap 2248557 2248555 GGGAAAATATAAAAA GACCTGCTTCT CTAA AGA-GCAGGTC TTTTCAAATCAAATG TERM 3486 2248563 - 2248587 + r 82 -9.4 -4.14243 | gap 1, opp_overlap 2248563 2248557 2248555 GGGAAAATATAAAAA GACCTGCTTCT CTAA AGA-GCAGGTC TTTTCAAATCAAATG sodA 2249213 - 2248605 - | manganese (Mn) superoxide dismutase SodA TERM 3487 2248884 - 2248862 - G 72 -10 -2.78679 | overlap 2248861 2248864 CTGCTGCAGCGAAAT CAGATTTGAA TTT TTCAAATCCG CCTAATTCTTTTTCG TERM 3488 2249436 - 2249424 - R 100 -7.7 -5.27206 | GACATAGAATAAAAA GATGC CCA GCATC AGCGCTTGGATCAAT yqgC 2249885 - 2249400 - | hypothetical protein yqgB 2250029 - 2250799 + | hypothetical protein TERM 3489 2250814 - 2250834 + T 91 -8.2 -5.07275 | opp_overlap 2250814 ATTAAGTAGATGAAA GCTCCCCC AACTC GGAGGAGC TTTTTATGTATGTGC TERM 3490 2250834 - 2250814 - T 86 -11.1 -3.89302 | opp_overlap 2250814 ATTAAGTAGATGAAA GCTCCCCCA ACT CGGAGGAGC TTTTTATGTATGTGC BPUM_2233 2251484 - 2250855 - | ribosomal-protein-alanine N-acetyltransferase yqfZ 2251590 - 2251892 + | hypothetical protein TERM 3491 2252854 - 2252824 - g 72 -7.6 -3.78329 | GTGGACGAATCGAAA TTGACCTCATTAGC ATT GCAAATGAAGTCGA AGAATATATCTCCAC ispG 2251998 - 2253110 + | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase TERM 3492 2253108 - 2253150 + T 100 -14.5 -3.9461 | gap 1, opp_overlap 2253111 2253118, overlap 2253111 2253118 GCAAAAGCCAACGCA TAACA-AAAAACGCCTGACG TCAC TGTCAGGCGTTTTTCTGTTG TTCTTGTTAAAAGAA TERM 3493 2253111 - 2253147 + T 100 -14 -4.09963 | gap 1, opp_overlap 2253111 2253118, overlap 2253108 2253118 AAAGCCAACGCATAA CA-AAAAACGCCTGACG TCAC TGTCAGGCGTTTTTCTG TTGTTCTTGTTAAAA TERM 3494 2253147 - 2253111 - T 100 -13.3 -3.43965 | gap 1, opp_overlap 2253108 2253111 2253118, overlap 2253118 AAAGCCAACGCATAA CA-AAAAACGCCTGAC GTCACT GTCAGGCGTTTTTCTG TTGTTCTTGTTAAAA TERM 3495 2253118 - 2253139 + T 100 -12.3 -5.21506 | opp_overlap 2253118 2253111, overlap 2253111 2253108 ACGCATAACAAAAAA CGCCTGACG TCAC TGTCAGGCG TTTTTCTGTTGTTCT TERM 3496 2253139 - 2253118 - T 100 -11.6 -5.56673 | opp_overlap 2253111 2253108 2253118, overlap 2253111 ACGCATAACAAAAAA CGCCTGAC GTCACT GTCAGGCG TTTTTCTGTTGTTCT yqfX 2253519 - 2253157 - | hypothetical protein TERM 3497 2253863 - 2253851 - g 83 -9.1 -4.12532 | CCTCTTATATATAAA CAGGC AAA GCCTG CTAAGGACGCAAAAG yqfW 2253659 - 2254237 + | hypothetical protein TERM 3498 2254268 - 2254247 - T 91 -10.2 -4.6955 | TATTAATACAGAAAA GCCGATAC TCTAAT GTATCGGC TTCAGATTGTTGACA TERM 3499 2254280 - 2254318 + T 100 -21.4 -4.18506 | opp_overlap 2254286, overlap 2254286 CGGCTTCAGATTGTT GACAAAGGGCTAAAATGA TTT TTATTTTAGCCCTTTGTC TTCTTTTCAGCGTGA TERM 3500 2254286 - 2254312 + T 100 -13.2 -4.45253 | opp_overlap 2254286, overlap 2254280 CAGATTGTTGACAAA GGGCTAAAATGA TTT TTATTTTAGCCC TTTGTCTTCTTTTCA TERM 3501 2254312 - 2254286 - T 86 -11 -3.87373 | opp_overlap 2254286 2254280 CAGATTGTTGACAAA GGGCTAAAATGA TTT TTATTTTAGCCC TTTGTCTTCTTTTCA TERM 3502 2254469 - 2254448 - T 76 -10.2 -3.15999 | opp_overlap 2254448 TGTCTACACACTGAA GCCGATAC TCTAAT GTATCGGC TTGTTTGATAGAACA TERM 3503 2254448 - 2254469 + T 83 -10.2 -4.00042 | opp_overlap 2254448 TGTCTACACACTGAA GCCGATAC TCTAAT GTATCGGC TTGTTTGATAGAACA BPUM_2238 2255374 - 2254457 - | NagC/XylR family transcriptional regulator TERM 3504 2255087 - 2255100 + g 75 -5.3 -4.87318 | opp_overlap 2255077 2255073, overlap 2255077 2255091 ACGAAGAGAGGTTTT CTCTT CTAA AAGAG TTTTTAGATTTTGAC TERM 3505 2255587 - 2255564 - R 81 -5.3 -5.2015 | opp_overlap 2255564 TGAACAATAGAAAAA GCAATGGAA TTGATT TACCATTGC TTTTCAAGTTAATTG BPUM_2239 2256210 - 2255596 - | internalin G BPUM_2240 2256408 - 2256247 - | hypothetical protein TERM 3506 2256580 - 2256551 - R 100 -12.3 -4.87133 | opp_overlap 2256551 2256548, overlap 2256554 ATGCCTCAAATAAAA GAACTCCAATTCA AATA TGAATTGGAGTGC TCATTAAATGACGGA TERM 3507 2256551 - 2256580 + r 86 -12.3 -2.75064 | opp_overlap 2256551 2256554, overlap 2256548 ATGCCTCAAATAAAA GAACTCCAATTCA AATA TGAATTGGAGTGC TCATTAAATGACGGA TERM 3508 2256577 - 2256554 - R 100 -12.6 -4.54026 | opp_overlap 2256551 2256548, overlap 2256551 CCTCAAATAAAAGAA CTCCAATTCA AATA TGAATTGGAG TGCTCATTAAATGAC zur 2257074 - 2256646 - | Fur family transcriptional regulator Zur yceA 2257912 - 2257052 - | ABC transporter ATP-binding protein ycdI 2258688 - 2257912 - | iron ABC transporter permease TERM 3509 2258767 - 2258746 - R 100 -11.7 -5.24796 | opp_overlap 2258746 2258751, overlap 2258751 TTTATACAACAAAAA GAAAATGGC TTTT GCCATTTTC TCTGTCCATACATAC TERM 3510 2258746 - 2258767 + r 82 -11.7 -2.91912 | opp_overlap 2258746 2258751, overlap 2258751 TTTATACAACAAAAA GAAAATGGC TTTT GCCATTTTC TCTGTCCATACATAC TERM 3511 2258762 - 2258751 - R 85 -5.8 -5.44638 | opp_overlap 2258746 2258751, overlap 2258746 ACAACAAAAAGAAAA TGGC TTTT GCCA TTTTCTCTGTCCATA TERM 3512 2258751 - 2258762 + r 74 -5.8 -4.61868 | opp_overlap 2258751 2258746, overlap 2258746 ACAACAAAAAGAAAA TGGC TTTT GCCA TTTTCTCTGTCCATA yqfU 2259702 - 2258824 - | hypothetical protein yqfT 2259842 - 2260096 + | hypothetical protein TERM 3513 2260123 - 2260105 - T 100 -7.3 -5.67283 | opp_overlap 2260105, overlap 2260107 AAGTTAAACAAAAAA GGGCCGC ATTTA GCGGCAC CTCATGTTGTTGTAT nfo 2261035 - 2260145 - | endonuclease IV TERM 3514 2260890 - 2260902 + g 76 -2.7 -5.40072 | opp_overlap 2260890, overlap 2260882 TGTCCAGCTTCAATA TTGAG GTC TTCAA TTTTTTTACGGCGCG yqfR 2262368 - 2261049 - | ATP-dependent RNA helicase TERM 3515 2261242 - 2261254 + g 71 -3.4 -5.07652 | GCATCTCGCCATTCG CCAT GTACA ATGG TTTTATTTTCAAACA yqfQ 2262524 - 2263225 + | spore protein YqfQ TERM 3516 2263340 - 2263309 - f 73 -8.3 -3.55368 | gap 1, opp_overlap 2263310 2263312 2263318, overlap 2263312 2263318 ATGGAAGCTAGAGAA TGATAAAAAGCCGT TTTTC ACGGCTTTTTAT-A TTGTTCTTCTCTAGC TERM 3517 2263310 - 2263340 + F 85 -9.9 -4.06864 | opp_overlap 2263309 2263312 2263318, overlap 2263312 2263318 TGGAAGCTAGAGAAT GATAAAAAGCCGT TTTTC ACGGCTTTTTATA TTGTTCTTCTCTAGC TERM 3518 2263338 - 2263312 - f 91 -12.5 -2.90508 | opp_overlap 2263312 2263310 2263318, overlap 2263309 2263318 GAAGCTAGAGAATGA TAAAAAGCCGT TTTTC ACGGCTTTTTA TATTGTTCTTCTCTA TERM 3519 2263312 - 2263338 + F 95 -12.5 -3.61971 | opp_overlap 2263309 2263312 2263318, overlap 2263310 2263318 GAAGCTAGAGAATGA TAAAAAGCCGT TTTTC ACGGCTTTTTA TATTGTTCTTCTCTA TERM 3520 2263332 - 2263318 - f 85 -7.1 -5.02439 | opp_overlap 2263318 2263312 2263310, overlap 2263312 2263309 AGAGAATGATAAAAA GCCGT TTTTC ACGGC TTTTTATATTGTTCT TERM 3521 2263318 - 2263332 + F 91 -7.1 -5.21506 | opp_overlap 2263312 2263309 2263318, overlap 2263312 2263310 AGAGAATGATAAAAA GCCGT TTTTC ACGGC TTTTTATATTGTTCT yqfP 2263383 - 2264327 + | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase TERM 3522 2264325 - 2264364 + T 100 -18.9 -3.68619 | opp_overlap 2264325 2264330, overlap 2264330 GTGAAAACAAAGAAA TAAAAGAACGTCAGAGC ATAGAG GCTCTGACGTTCTTTTG TTTACATAAATTGAA TERM 3523 2264364 - 2264325 - T 100 -16.7 -4.8743 | opp_overlap 2264325 2264330, overlap 2264330 GTGAAAACAAAGAAA TAAAAGAACGTCAGAGC ATAGAG GCTCTGACGTTCTTTTG TTTACATAAATTGAA TERM 3524 2264359 - 2264330 - T 100 -16.6 -5.24515 | opp_overlap 2264325 2264330, overlap 2264325 AACAAAGAAATAAAA GAACGTCAGAGC ATAGAG GCTCTGACGTTC TTTTGTTTACATAAA TERM 3525 2264330 - 2264359 + T 100 -16.6 -4.90778 | opp_overlap 2264330 2264325, overlap 2264325 AACAAAGAAATAAAA GAACGTCAGAGC ATAGAG GCTCTGACGTTC TTTTGTTTACATAAA yqfO 2265487 - 2264366 - | hypothetical protein yqfN 2266196 - 2265480 - | hypothetical protein TERM 3526 2266293 - 2266273 - R 100 -6.2 -5.72207 | opp_overlap 2266273 TTCAAATGAAAAAAA GCTCTTCT GATCA AAAAGAGC TTTTTGCGTAACATT cccA 2266594 - 2266307 - | cytochrome c550 TERM 3527 2266551 - 2266566 + g 100 -9 -4.73094 | TCTTGCTTTTGCTCC TCGCCT CCAG AGGCGA TTTTGTCTTCATCTT TERM 3528 2266964 - 2266939 - R 87 -10.5 -4.24342 | opp_overlap 2266938, overlap 2266935 2266942 TTTTTGATGAAGAAA GAACGGATCTC TTTC AAGATCCGTCC AGTTTCTACTCTAAG TERM 3529 2266961 - 2266942 - R 83 -8.6 -4.24413 | opp_overlap 2266938, overlap 2266935 2266939 TTGATGAAGAAAGAA CGGATCTC TTTC AAGATCCG TCCAGTTTCTACTCT sigA 2268091 - 2266970 - | RNA polymerase sigma factor RpoD TERM 3530 2267656 - 2267679 + g 78 -6 -4.90869 | TGCTGACAACGAGAC GAAGGTTTGC TTCC GCTAATCTTC TTTTTGATTCCTCAT dnaG 2270122 - 2268293 - | DNA primase yqxD 2270656 - 2270156 - | hypothetical protein TERM 3531 2270916 - 2270897 - R 74 -5.7 -4.82667 | opp_overlap 2270897 CCACCATAGGAAAAA CCCAGGA GGAGCA TCCTGAG TTTATTCGGAACCTC yqfL 2271739 - 2270918 - | hypothetical protein yqzB 2272502 - 2271765 - | transcriptional regulator TERM 3532 2272558 - 2272533 - R 100 -10.5 -5.243 | opp_overlap 2272533 TAAATGAGTAAAAAA CGATTGCCCTT CAAA AAAGGCAACCG TTCTTAGGTATTTAT glyS 2274615 - 2272570 - | glycyl-tRNA synthetase subunit beta glyQ 2275495 - 2274608 - | glycyl-tRNA synthetase subunit alpha TERM 3533 2274640 - 2274652 + g 71 -3.3 -5.03945 | CCTCCTCTTTTAGCA TAGGG AAT CCCAA TTTTTCTCGTTCTTC TERM 3534 2275574 - 2275621 + r 100 -16.4 -4.58283 | opp_overlap 2275566 2275563 2275574 AAAAGAACACAAAAA CTCCCGTCTCTATGCTCGCAAG GCTC CTTGCAAACATAGGGACGAGAG TTTTTCCCGCGGTTC TERM 3535 2275621 - 2275574 - R 100 -20.8 -5.25799 | opp_overlap 2275574, overlap 2275566 2275563 AAAAGAACACAAAAA CTCCCGTCTCTATGCTCGCAAG GCTC CTTGCAAACATAGGGACGAGAG TTTTTCCCGCGGTTC recO 2276595 - 2275825 - | DNA repair protein RecO TERM 3536 2275856 - 2275881 + g 86 -3.4 -5.72207 | overlap 2275844 CCGCCCATGAGCTTT TTCATGGATT CCATTT GATTCATGAA TTTTTTTGATTTCAA BPUM_2261 2276774 - 2276631 - | hypothetical protein era 2277829 - 2276924 - | GTP-binding protein Era cdd 2278220 - 2277822 - | cytidine deaminase TERM 3537 2278597 - 2278568 - R 83 -7.9 -4.564 | gap 1, opp_overlap 2278568 AATGTGAAACCAAAA GCCGCAGATCATCA CGA TGATGG-CTGCGAC TGTGTGAAATCGAAA yqfG 2279177 - 2278698 - | putative metalloprotease TERM 3538 2278741 - 2278753 + g 70 -2.7 -4.95618 | TCCAAGATCTTTGTC TGTTT GGC GAACA TTTCTTTTTCATCTT yqfF 2281370 - 2279178 - | HD family hydrolase TERM 3539 2281397 - 2281373 - R 93 -10.1 -4.9138 | opp_overlap 2281368 2281367 2281376 ACGATCGAAACAAAA TGACCCGAT GAAGACG ATCGGGTCA TTAAGGTCATTTTTG phoH2 2282363 - 2281404 - | phosphate starvation-induced protein yqfD 2283557 - 2282367 - | stage IV sporulation protein yqfC 2283857 - 2283576 - | sporulation protein YqfC TERM 3540 2284052 - 2284038 - R 91 -3.5 -5.95539 | GGTCAAACAAAAAAA GCCTC ATGAA GAGAC TTTATAATGGGGTGA BPUM_2269 2285123 - 2284074 - | hypothetical protein TERM 3541 2284538 - 2284526 - G 74 -6.3 -4.42062 | CATTTGCCAAATAAA GGTAT CGT ATACC GTCAGGATTCGCTCT TERM 3542 2284673 - 2284693 + g 75 -3.3 -5.09895 | AAATCTCACCCTTTT GTAAGATTT TTG AGTTCTTAC TTTTTTCCGTAAATA TERM 3543 2285182 - 2285148 - R 81 -11.7 -2.68823 | opp_overlap 2285155, overlap 2285155 CCCTTCTTATATAAT TAAAAAACGGTATGA ATTTA TCATACCGTTCTCTA TCGTTTCATCGTTCG TERM 3544 2285155 - 2285175 + r 80 -9.8 -3.66787 | opp_overlap 2285155 2285148 TATATAATTAAAAAA CGGTATGA ATTTA TCATACCG TTCTCTATCGTTTCA TERM 3545 2285175 - 2285155 - R 100 -9.8 -5.35354 | opp_overlap 2285155, overlap 2285148 TATATAATTAAAAAA CGGTATGA ATTTA TCATACCG TTCTCTATCGTTTCA yqfB 2285653 - 2285180 - | hypothetical protein TERM 3546 2285265 - 2285283 + g 79 -8.2 -4.21768 | TGAACGACCGTATCT TGGTTGAG TTT CTCAATCA TTTTCGGCTTCATTC TERM 3547 2285301 - 2285311 + g 71 -6.8 -4.21936 | overlap 2285299 TTCGGCTTCATTCCA GCAG ATG CTGC TTTTGGCCTTGTAAG yqfA 2286677 - 2285685 - | hypothetical protein TERM 3548 2286088 - 2286103 + g 73 -5.4 -4.64157 | TGAGAAATCATATCT GGGTTT TCTA GAACCC TTTTATGATTATTTG yqeZ 2288018 - 2286705 - | serine peptidase TERM 3549 2288155 - 2288130 - R 100 -11.3 -5.626 | opp_overlap 2288117 2288130 GAGGGTATAAAAAAA GTACCCTTCTA ACAA TAGAAGGATAC TTTTTTATTGAGACA TERM 3550 2288130 - 2288155 + r 100 -9.1 -5.4505 | opp_overlap 2288130, overlap 2288117 GAGGGTATAAAAAAA GTACCCTTCTA ACAA TAGAAGGATAC TTTTTTATTGAGACA yqeY 2288609 - 2288160 - | hypothetical protein TERM 3551 2288264 - 2288287 + g 75 -10.4 -2.80821 | overlap 2288261 2288285 TACCCATATCAGCCT TCGATGAAGC ACCT GTTTCATCGA TCGTCTCTTTCACGA rpsU 2288797 - 2288624 - | 30S ribosomal protein S21 yqeW 2288980 - 2289909 + | PnaS family phosphate:sodium (Na+) symporter TERM 3552 2289908 - 2289945 + T 71 -8.5 -3.45118 | gap 1, opp_overlap 2289913, overlap 2289913 CGAATCAATCAAAAT AAAAACACCAGCTTGCCT TTT GGGCA-GCCGGTGTTTTA TTGATTATGAGGTCA TERM 3553 2289940 - 2289913 - T 100 -9.9 -5.54338 | gap 1, opp_overlap 2289908 2289913 CAATCAAAATAAAAA CACCAGCTTGCC TTTTG GGCA-GCCGGTG TTTTATTGATTATGA TERM 3554 2289913 - 2289940 + T 87 -8.4 -4.81852 | gap 1, opp_overlap 2289913, overlap 2289908 CAATCAAAATAAAAA CACCAGCTTGCCT TTT GGGCA-GCCGGTG TTTTATTGATTATGA miaB 2291311 - 2289950 - | 2-methylthioadenine synthetase yqeU 2292078 - 2291308 - | hypothetical protein prmA 2293037 - 2292102 - | ribosomal protein L11 methyltransferase dnaJ 2294193 - 2293060 - | chaperone DnaJ TERM 3555 2293450 - 2293462 + g 70 -7.7 -3.57792 | AACAAATAAATCGCC TGGAG GCC CTCCA TTTACACCTGGCTCC TERM 3556 2294312 - 2294285 - R 100 -11.4 -5.95539 | opp_overlap 2294285 TTGGAAAGAAAAAAA GTCAAAGCCAAG AGAT CCTGACTTTGAC TTTCTGACGAGTACG TERM 3557 2294285 - 2294312 + r 70 -7 -3.86897 | opp_overlap 2294285 TTGGAAAGAAAAAAA GTCAAAGCCAAG AGAT CCTGACTTTGAC TTTCTGACGAGTACG dnaK 2296200 - 2294359 - | chaperone DnaK grpE 2296782 - 2296225 - | chaperone GrpE TERM 3558 2296599 - 2296627 + g 81 -4 -5.32396 | gap 1, opp_overlap 2296604, overlap 2296604 GGCGTTTATAGTTTT CAAAAT-CTGCTT GAAC ACGCAGAATTTTG TTTTCTTTTTCATCT TERM 3559 2296816 - 2296835 + r 84 -8.6 -4.3898 | gap 1, opp_overlap 2296805 2296819, overlap 2296819 AAGATTCGAGAATAC GA-AGGGGC TGT GCCCCTATC TTTTATCACCCTACT TERM 3560 2296831 - 2296819 - R 81 -10.5 -3.42013 | opp_overlap 2296819 2296816 ATTCGAGAATACGAA GGGGC TGT GCCCC TATCTTTTATCACCC TERM 3561 2296819 - 2296831 + r 81 -10.5 -3.48115 | opp_overlap 2296819, overlap 2296816 ATTCGAGAATACGAA GGGGC TGT GCCCC TATCTTTTATCACCC hrcA 2297877 - 2296846 - | heat-inducible transcription repressor hemN 2299098 - 2297959 - | coproporphyrinogen III oxidase TERM 3562 2298667 - 2298688 + g 70 -5.9 -4.2717 | opp_overlap 2298671 ATCTCTTGCTCGCTC GAAAGACGT GAGA ACATCTTTC TTTTGATGAACTCGT TERM 3563 2299124 - 2299150 + r 76 -5.7 -4.8743 | opp_overlap 2299125 2299127, overlap 2299125 CTTCTTTACAGGTAA AGAGCCGCAGT TTATC GCTGCGGCACC TTTGTTTGTTTTCGA TERM 3564 2299125 - 2299149 + r 77 -9.2 -3.50831 | opp_overlap 2299125 2299127, overlap 2299124 TTCTTTACAGGTAAA GAGCCGCAGT TTATC GCTGCGGCAC CTTTGTTTGTTTTCG TERM 3565 2299149 - 2299125 - R 75 -8.5 -3.70902 | opp_overlap 2299124 2299125, overlap 2299127 TTCTTTACAGGTAAA GAGCCGCAG TTTATCG CTGCGGCAC CTTTGTTTGTTTTCG TERM 3566 2299147 - 2299127 - R 79 -9.7 -3.43773 | opp_overlap 2299125 2299124, overlap 2299125 CTTTACAGGTAAAGA GCCGCAG TTTATCG CTGCGGC ACCTTTGTTTGTTTT lepA 2301054 - 2299216 - | GTP-binding protein LepA TERM 3567 2299320 - 2299333 + g 82 -6.7 -4.85782 | TTTTCCCTTCTTTTT GCTTC TCAA GAAGC TTTCTTTTTCGGGAA TERM 3568 2301142 - 2301161 + r 72 -7.8 -3.79251 | opp_overlap 2301142 TCGAAATCAAGAAAA GCCGCTCA TTGA TTAGCGGC TTTAGTCATACGATG TERM 3569 2301161 - 2301142 - R 84 -7.8 -4.84642 | opp_overlap 2301142 TCGAAATCAAGAAAA GCCGCTCA TTGA TTAGCGGC TTTAGTCATACGATG yqeP 2301518 - 2301186 - | hypothetical protein spoIIP 2302741 - 2301533 - | stage II sporulation protein P TERM 3570 2301614 - 2301626 + g 80 -6.3 -4.8143 | overlap 2301619 GAAGACATCAGCTGC TGCAT TGG ATGCA TTTTTCAATTCTTCC gpr 2303923 - 2302808 - | germination protease TERM 3571 2304342 - 2304331 - g 73 -3.6 -4.96848 | TCTTGTACACAAAAA CGCA GCTG CGCG TTACAAGTCAAGACT rpsT 2304122 - 2304388 + | 30S ribosomal protein S20 TERM 3572 2304490 - 2304512 + T 100 -8.5 -5.80817 | opp_overlap 2304478 2304490 2304491, overlap 2304491 ACATCTAAACAAAAA TGACCTTCT TTTTT AGAAGGTCG TTTTTTTATGTTCAA TERM 3573 2304512 - 2304490 - T 84 -6.3 -5.31519 | opp_overlap 2304490 2304491, overlap 2304478 2304491 ACATCTAAACAAAAA TGACCTTCT TTTTT AGAAGGTCG TTTTTTTATGTTCAA TERM 3574 2304511 - 2304491 - T 81 -9.8 -3.77285 | opp_overlap 2304491 2304490, overlap 2304478 2304490 CATCTAAACAAAAAT GACCTTCT TTTTT AGAAGGTC GTTTTTTTATGTTCA TERM 3575 2304491 - 2304511 + T 85 -9.8 -4.06863 | opp_overlap 2304478 2304490 2304491, overlap 2304490 CATCTAAACAAAAAT GACCTTCT TTTTT AGAAGGTC GTTTTTTTATGTTCA holA 2305543 - 2304524 - | DNA polymerase III subunit delta BPUM_2290 2305780 - 2305914 + | hypothetical protein TERM 3576 2305934 - 2305948 + T 100 -7.1 -5.9003 | opp_overlap 2305934 ATGAATGCTACATGA CTGCC TTTTT GGCAG TTTTTTTATTGATTT comEC 2308281 - 2305954 - | competence protein EC TERM 3577 2306442 - 2306457 + g 74 -4.7 -4.79223 | CGATCCCTTTTTCAG CTGCT TCTTTT AGCAG TTTTTCATCCTCTGG TERM 3578 2307799 - 2307810 + g 75 -5.8 -4.67038 | opp_overlap 2307798 2307799 CTGCGGTAAGAAAAT GGCA TGAA TGCC TTTTGATTTTAGAAA comEB 2308843 - 2308274 - | dCMP deaminase comEA 2309538 - 2308909 - | competence protein EA TERM 3579 2309811 - 2309786 - g 70 -9.8 -2.53581 | opp_overlap 2309793, overlap 2309791 CAGAGCTTGAAGTTA CGAAACAGCT TACAGG AGCTGTCTCG AATAAAGATTTTATC comER 2309629 - 2310477 + | late competence protein ComER TERM 3580 2310516 - 2310502 - T 73 -2.8 -5.2166 | opp_overlap 2310509 2310515, overlap 2310503 2310515 CAACAAGCGAAAAAA GGGTTT TAA AAAACC ATCGTCCATTAAACG TERM 3581 2310535 - 2310515 - T 90 -8.3 -5.01732 | opp_overlap 2310509 2310515, overlap 2310502 2310503 AAGGGTTTTAAAAAA CCATCGTCC ATT AAACGATGG TTTTTGGTTTCTTAG TERM 3582 2310515 - 2310535 + T 85 -6.9 -5.09521 | opp_overlap 2310502 2310503 2310515, overlap 2310509 AAGGGTTTTAAAAAA CCATCGT CCATTAA ACGATGG TTTTTGGTTTCTTAG yqeM 2311268 - 2310525 - | SAM dependent methyltransferase BPUM_2296 2311621 - 2311265 - | hypothetical protein yqeK 2312197 - 2311634 - | hypothetical protein nadD 2312756 - 2312187 - | nicotinic acid mononucleotide adenylyltransferase yqeI 2313060 - 2312770 - | RNA binding protein aroD 2313896 - 2313054 - | shikimate 5-dehydrogenase TERM 3583 2313199 - 2313216 + g 86 -7.7 -4.68511 | TTTAAACCTAACCCG GCTGCTT CTCT GAGCAGC TTTGTTTCTATTGGA yqeH 2315018 - 2313918 - | GTP-binding protein YqeH TERM 3584 2314065 - 2314091 + g 70 -5.9 -4.32034 | gap 1, opp_overlap 2314067 AAAGGTATGCGGAAC GAGTGG-TGGAA AATC TTCCATCCCCTC TTTTGATGGTGGTGA TERM 3585 2314623 - 2314635 + g 78 -5.5 -4.94058 | TAAGAACACAGCGAT CGGGT TCA ATCCG TTTTCTTTCGCTTCC yqeG 2315371 - 2315021 - | HAD family phosphatase BPUM_2303 2315490 - 2315642 + | hypothetical protein TERM 3586 2315760 - 2315735 - f 72 -9.1 -3.36505 | ACACTCTACCCACAA GTTATCCACTT CACC ATGTGGATAAC AGAACGATTGTTCTT TERM 3587 2315884 - 2315896 + F 74 -7.7 -4.0162 | AGGGGAGGTGTTTTT CCCAT CAT ATGGG TTTCTAGTATGAAAA sda 2315905 - 2316045 + | sporulation inhibitor Sda TERM 3588 2316178 - 2316153 - T 93 -10.5 -5.00884 | opp_overlap 2316153 2316151 ATTTTCCGTAAAAAA CACCCCTTCTC AACA AAGAAGAGGTG TCTTATTTGCAAGGC BPUM_2305 2316330 - 2316181 - | hypothetical protein yqeF 2317137 - 2316409 - | lipoprotein BPUM_2307 2317981 - 2317220 - | polysaccharide deacetylase TERM 3589 2318068 - 2318097 + r 79 -9.3 -3.74781 | opp_overlap 2318074, overlap 2318074 TCTTTTTTTACATAA AAAAAAGCTGGCC ATCA GGCCCGCTTTTTG TTTCACGTTTGGTTT TERM 3590 2318074 - 2318091 + r 100 -8.3 -5.29846 | opp_overlap 2318074, overlap 2318068 TTTACATAAAAAAAA GCTGGCC ATCA GGCCCGC TTTTTGTTTCACGTT TERM 3591 2318091 - 2318074 - R 100 -8.3 -6.02914 | opp_overlap 2318068 2318074 TTTACATAAAAAAAA GCTGGCC ATCA GGCCCGC TTTTTGTTTCACGTT rapA4 2319348 - 2318137 - | aspartate phosphatase response regulator TERM 3592 2318978 - 2318962 - G 71 -2.3 -5.15634 | CATGCCACGAAAAAA TGCAT GGTAATA ATGCA GCATATCAGATAACT spoIIIC 2319349 - 2320218 + | sporulation sigma factor SigK TERM 3593 2320243 - 2320260 + F 70 -7.7 -3.69354 | opp_overlap 2320243 TAATACTAATAAAAA CAGACCT TGTT GGGTCTG TTTCAGCTTGTAGAC TERM 3594 2320260 - 2320243 - f 91 -7 -5.19251 | opp_overlap 2320243 TAATACTAATAAAAA CAGACC TTGTTG GGTCTG TTTCAGCTTGTAGAC TERM 3595 2320266 - 2320288 + F 100 -15 -5.39721 | GTTGGGTCTGTTTCA GCTTGTAGAC AAA GTCTACAAGC TTTTTTGTATAATAA TERM 3596 2320756 - 2320743 - g 75 -3.1 -5.18357 | gap 1, overlap 2320744 GAAGCGATGAAAAAA GGGCTC GTT GA-CCC GTCTATCGCCTTCAT TERM 3597 2320966 - 2320942 - g 100 -9.3 -5.02645 | overlap 2320946 AAGAAACAAAAGAAA TCAAGGTCAGT ACA ACTGACCCAGA GAGTGGCTATTATGT TERM 3598 2320962 - 2320946 - g 88 -10.9 -3.85719 | overlap 2320942 AACAAAAGAAATCAA GGTCAGT ACA ACTGACC CAGAGAGTGGCTATT TERM 3599 2321299 - 2321316 + G 80 -9.9 -3.73859 | ATTTTGATTGTTACA TTTGCCC CAAC GGGCAAA TTCTCTCTTATCGTA TERM 3600 2321574 - 2321564 - g 81 -5.4 -5.10933 | GGATGCAAAAGAAAA GCAT GGT ATGC GTTGGACGAAACTTC TERM 3601 2321685 - 2321660 - g 100 -13.4 -3.98747 | TAAAAAACTAGCAAA CTGGACATGG AAAGTA CCATGTCCAG CGTAAAACACATGAT BPUM_2310 2320335 - 2321690 + | transposase TERM 3602 2321762 - 2321716 - T 93 -4.7 -5.75342 | gap 2, opp_overlap 2321724, overlap 2321724 GTTTTTCAAAAAAAA TGT-GA-AAACCCCACTTTTACT TGA AGTAAAGGTAGGGTTTGTCTACG GTCTGAAACAGACCT TERM 3603 2321724 - 2321752 + T 86 -11.1 -4.05747 | opp_overlap 2321724 2321716 AAAAAAATGTGAAAA CCCCACTTTTACT TGA AGTAAAGGTAGGG TTTGTCTACGGTCTG TERM 3604 2321752 - 2321724 - T 88 -11.1 -4.35095 | opp_overlap 2321724, overlap 2321716 AAAAAAATGTGAAAA CCCCACTTTTACT TGA AGTAAAGGTAGGG TTTGTCTACGGTCTG TERM 3605 2321762 - 2321776 + T 81 -10 -3.73904 | opp_overlap 2321771, overlap 2321771 GTAGGGTTTGTCTAC GGTCTG AAA CAGACC TTGTTGGGTCTGTTT TERM 3606 2321771 - 2321788 + T 100 -7.7 -5.27335 | opp_overlap 2321771, overlap 2321762 GTCTACGGTCTGAAA CAGACCT TGTT GGGTCTG TTTTTATTTCGGCAC BPUM_2312 2322388 - 2321873 - | hypothetical protein TERM 3607 2322451 - 2322473 + H 72 -5.7 -4.56597 | opp_overlap 2322451, overlap 2322455 ACAGTTGATTTATAA TAAATGCTC ATTAA GAGTATTTA TTTTTCACCCACAAG BPUM_2313 2322788 - 2322991 + | hypothetical protein BPUM_2314 2323091 - 2323750 + | lipoprotein TERM 3608 2324195 - 2324212 + T 100 -7.7 -5.42259 | opp_overlap 2324189 2324195 TAATACTAATAAAAA CAGACCT TGTT GGGTCTG TTTTTTTGAACATCA TERM 3609 2324212 - 2324195 - T 91 -7 -5.19251 | opp_overlap 2324195, overlap 2324189 TAATACTAATAAAAA CAGACC TTGTTG GGTCTG TTTTTTTGAACATCA BPUM_2316 2324526 - 2324275 - | hypothetical protein BPUM_2317 2324997 - 2324581 - | hypothetical protein TERM 3610 2325765 - 2325745 - R 100 -7.5 -5.75538 | opp_overlap 2325745 CCGAAAAAATAAAAA CCTCACGCT ACT AGCAGGAGG TTTTTTCCACAGGAA TERM 3611 2325745 - 2325765 + r 76 -5.3 -5.00616 | opp_overlap 2325745 CCGAAAAAATAAAAA CCTCACGCT ACT AGCAGGAGG TTTTTTCCACAGGAA TERM 3612 2325765 - 2325785 + r 70 -6.9 -3.81195 | overlap 2325767 CGCTACTAGCAGGAG GTTTTTTCC ACA GGAAAAATC TTATCGTTTTTCTTC TERM 3613 2325767 - 2325783 + r 71 -8.1 -3.45941 | overlap 2325765 CTACTAGCAGGAGGT TTTTTCC ACA GGAAAAA TCTTATCGTTTTTCT BPUM_2319 2325977 - 2325786 - | hypothetical protein TERM 3614 2325946 - 2325936 - G 71 -3.2 -4.97824 | overlap 2325937 AAAACCTAAACAAAA CGCT GTC AGCA TATAGAGGCTGATCA TERM 3615 2326047 - 2326072 + r 84 -7.6 -4.74706 | opp_overlap 2326047 ATTGGCTTTAAAAAA GAAGCGAATC CATTAA GACTCGCTTC TTTTTACGTATTCAA TERM 3616 2326072 - 2326047 - R 93 -10.5 -5.00884 | opp_overlap 2326047 ATTGGCTTTAAAAAA GAAGCGAATCC ATTA AGACTCGCTTC TTTTTACGTATTCAA yjeA 2327487 - 2326084 - | polysaccharide deacetylase TERM 3617 2326533 - 2326552 + g 72 -7.9 -3.78775 | opp_overlap 2326532 2326535 TTTCACCTAGCATAT CAGGGTA ATATTG TACCCTG TTTCCTAATACAAAA TERM 3618 2326591 - 2326607 + g 79 -6.7 -4.63527 | ATGTCCTTTGTTTTC TTTTAAG GCT CTTAAAA TTTTTGAGGTCGTGG TERM 3619 2327650 - 2327632 - R 83 -5.3 -5.49569 | gap 1, opp_overlap 2327630 2327632 GAGGAATAGAAAAAA GGGCTTGA TTTC TCA-GCCC TCTCATTATTTTTGC BPUM_2321 2328210 - 2327656 - | hypothetical protein BPUM_2322 2328643 - 2328227 - | GNAT family acetyltransferase TERM 3620 2328839 - 2328819 - R 100 -9 -5.54907 | TCCAGAAAATAAAAA GGCATCCC ATAAA AGGATGCC CCCTTCATTACCACT BPUM_2323 2329134 - 2328847 - | hypothetical protein BPUM_2324 2329281 - 2329565 + | hypothetical protein TERM 3621 2329596 - 2329568 - T 93 -11.8 -4.25104 | opp_overlap 2329570, overlap 2329570 GGCGCTTGAGTAAAA GACCCTCTATCC ACATG GGATAGAGGGTT TCAGATTGTTGACAA BPUM_2325 2329733 - 2329545 - | hypothetical protein TERM 3622 2329570 - 2329594 + g 100 -14.4 -3.72051 | opp_overlap 2329568 2329570 CGCTTGAGTAAAAGA CCCTCTATCC ACATG GGATAGAGGG TTTCAGATTGTTGAC TERM 3623 2329594 - 2329570 - G 100 -14.4 -3.73042 | opp_overlap 2329570, overlap 2329568 CGCTTGAGTAAAAGA CCCTCTATCC ACATG GGATAGAGGG TTTCAGATTGTTGAC TERM 3624 2329607 - 2329645 + g 100 -19.2 -4.18506 | opp_overlap 2329613, overlap 2329613 GGGTTTCAGATTGTT GACAAAGGGCTAAAATGA TCT TGATTTTAGCCCTTTGTC TTCTTTTCAGCGTGA TERM 3625 2329639 - 2329613 - G 88 -11 -3.87373 | opp_overlap 2329613 2329607 CAGATTGTTGACAAA GGGCTAAAATGA TCT TGATTTTAGCCC TTTGTCTTCTTTTCA TERM 3626 2329613 - 2329639 + g 100 -11 -4.45253 | opp_overlap 2329613, overlap 2329607 CAGATTGTTGACAAA GGGCTAAAATGA TCT TGATTTTAGCCC TTTGTCTTCTTTTCA TERM 3627 2329776 - 2329800 + r 100 -14.4 -4.99043 | TGTCTACACGCTGAA CCCTCTATCC ACATG GGATAGAGGG TTTTCTTTATACACG BPUM_2326 2331147 - 2329807 - | major facilitator transporter TERM 3628 2330204 - 2330186 - G 93 -8.8 -4.41348 | overlap 2330190 GCTGGTGCAAAGAAA GAAAGGGC CAT GCCCGTTC CCCCTACGGTGAGAA TERM 3629 2330200 - 2330190 - G 100 -8.2 -4.78326 | overlap 2330186 GTGCAAAGAAAGAAA GGGC CAT GCCC GTTCCCCCTACGGTG araA 2332650 - 2331229 - | L-arabinose isomerase araD 2333372 - 2332668 - | L-ribulose-5-phosphate 4-epimerase BPUM_2329 2334991 - 2333366 - | xylulokinase BPUM_2330 2335265 - 2336365 + | transcriptional regulator TERM 3630 2336358 - 2336391 + T 85 -10.5 -4.19238 | gap 1, opp_overlap 2336363, overlap 2336363 AAATGAATGCAAGAA AAAAATGAGCC-CTTG CCG CAAGAGGCTCATTTTA TTTTAGAATTCGACC TERM 3631 2336363 - 2336386 + T 93 -10.4 -5.10163 | gap 1, opp_overlap 2336363, overlap 2336358 AATGCAAGAAAAAAA TGAGCC-CTTG CCG CAAGAGGCTCA TTTTATTTTAGAATT TERM 3632 2336386 - 2336363 - T 100 -10.4 -5.83226 | gap 1, opp_overlap 2336363 2336358 AATGCAAGAAAAAAA TGAGCC-CTTG CCG CAAGAGGCTCA TTTTATTTTAGAATT TERM 3633 2336603 - 2336579 - T 100 -12.3 -5.5604 | opp_overlap 2336577, overlap 2336598 TTAATCAAGAAAAAA TCCCCATCTTT TAG AAAGATAGGGA ACTTGCCTATTACGC BPUM_2331 2337338 - 2336613 - | protein disulfide-isomerase TERM 3634 2337467 - 2337442 - R 90 -8.3 -5.00138 | overlap 2337436 GATGGAAATGAAAAA GCCCCTCCTTC TAAG AAAGGAAAGGC GTTAAACATTTACTA hxlB 2338037 - 2337480 - | 3-hexulose-6-phosphate isomerase hxlA 2338666 - 2338034 - | 3-hexulose-6-phosphate synthase TERM 3635 2338899 - 2338862 - R 100 -18.8 -4.21812 | opp_overlap 2338868, overlap 2338868 CGTGATTGAAAAGAA GACAAAGGGCTAAAAT AAAGTA ATTTTAGCCCTTTGTC TACAATCGGTAACCT TERM 3636 2338893 - 2338868 - R 89 -10.6 -4.45253 | opp_overlap 2338868, overlap 2338862 TGAAAAGAAGACAAA GGGCTAAAAT AAAGTA ATTTTAGCCC TTTGTCTACAATCGG TERM 3637 2338868 - 2338893 + r 85 -10.6 -4.05033 | opp_overlap 2338868 2338862 TGAAAAGAAGACAAA GGGCTAAAAT AAAGTA ATTTTAGCCC TTTGTCTACAATCGG hxlR 2339273 - 2338917 - | transcriptional regulator BPUM_2335 2340219 - 2339350 - | peptidase TERM 3638 2340455 - 2340465 + r 73 -6.8 -4.33182 | opp_overlap 2340454, overlap 2340452 AATGTCATAACTTAT CCTC CAA GAGG TTATTTTATAAATGC yxiJ 2340813 - 2340466 - | hypothetical protein TERM 3639 2340981 - 2341019 + r 80 -7.7 -4.37506 | gap 1, overlap 2340984 CGAGAAATCTGCTTT TTCTTATAGTTTGCTCCA ATAT TTGAGCGAACTAT-AGAA TTTATATTTGATAAT BPUM_2337 2341154 - 2340984 - | hypothetical protein TERM 3640 2341274 - 2341240 - R 90 -8.1 -4.90266 | opp_overlap 2341240, overlap 2341234 TTGATTAACTAAAAA TGCGCCTTATATT GAATATCAT AATATAAGGCACA TTTCCAATAATACTA BPUM_2338 2342001 - 2341348 - | hypothetical protein TERM 3641 2341485 - 2341495 + g 81 -4 -5.29742 | CAGCAATTAATTTTT TATC TAA GATA TTTCTTTTTTTGTCT TERM 3642 2342044 - 2342059 + r 71 -3.3 -5.04222 | AATCACCATGGCCTT GAATG TTTGCT CATTC TTTTTCCTTTACTTG wapA 2349053 - 2342031 - | cell wall-associated protein TERM 3643 2343856 - 2343871 + g 74 -6.2 -4.45664 | AGAGACACTTCATGT CCATTT GCAG AAATGG TTTTGATTAAGTTGC TERM 3644 2347123 - 2347111 - G 71 -9.1 -3.32963 | ATTTGTATTTTATAA CCGGT CGC ACCGG AAACTGAATTCCAAG TERM 3645 2347781 - 2347797 + g 100 -8.7 -4.62872 | opp_overlap 2347781 2347783 ATTGTCCTTTATATA CATTGGC TTT GCCGATG TTTTTAGAGCTTGGT TERM 3646 2349233 - 2349217 - R 85 -5.8 -5.4251 | opp_overlap 2349217, overlap 2349227 TTCACACATAAAAAA GCACCC TAAAC GGATGC TTCCATCAAATGATA BPUM_2340 2350097 - 2349222 - | beta-lactamase TERM 3647 2350107 - 2350123 + r 86 -7.9 -4.87037 | opp_overlap 2350107, overlap 2350120 TTTCAAATAAAAAAA GCCGGTT TAT ATCCGGC TTTTTGCTGTATATT TERM 3648 2350123 - 2350107 - R 100 -7.9 -5.95539 | opp_overlap 2350107 2350120 TTTCAAATAAAAAAA GCCGGTT TAT ATCCGGC TTTTTGCTGTATATT ydbM 2351300 - 2350137 - | acyl-CoA dehydrogenase BPUM_2342 2351421 - 2352209 + | amino acid ABC transporter ATP-binding protein TERM 3649 2352425 - 2352415 - g 71 -6.8 -4.2237 | AAATGAAGTGGAAAA GAGG CTC CCTC ATGTACATTTTGATT TERM 3650 2352658 - 2352643 - g 71 -4.6 -4.7173 | opp_overlap 2352652 2352657 TATGACATCTAAAAA GCTGGC TCCT GTCAGC CCTAGCGGGGGCTTG BPUM_2343 2352206 - 2353066 + | amino acid ABC transporter ATP-binding protein BPUM_2344 2353063 - 2353761 + | amino acid ABC transporter ATP-binding protein BPUM_2345 2353774 - 2354487 + | amino acid ABC transporter ATP-binding protein TERM 3651 2354492 - 2354518 + T 100 -9.4 -5.80364 | opp_overlap 2354492, overlap 2354494 TCGGACGTTAAAAAA GCCGATCAGGCT CAA ATCCTGATCGAC TTTTTTTATTCGCCT TERM 3652 2354518 - 2354492 - T 100 -11.6 -5.0538 | opp_overlap 2354492 2354494 TCGGACGTTAAAAAA GCCGATCAGGCT CAA ATCCTGATCGAC TTTTTTTATTCGCCT TERM 3653 2354494 - 2354516 + T 77 -10.6 -3.0287 | opp_overlap 2354492, overlap 2354492 GGACGTTAAAAAAGC CGATCAGGCT CAA ATCCTGATCG ACTTTTTTTATTCGC yjqC 2355354 - 2354524 - | sporulation related manganese (Mn) catalase TERM 3654 2355448 - 2355469 + r 79 -8.7 -3.93638 | opp_overlap 2355448 GTGTGCATAAAAAAA GAGAATGGC CTCT GCCATTCCC TTTGTCACCTTACTT TERM 3655 2355469 - 2355448 - R 100 -10.9 -5.60993 | opp_overlap 2355448 GTGTGCATAAAAAAA GAGAATGGC CTCT GCCATTCCC TTTGTCACCTTACTT ydjL 2356523 - 2355483 - | zinc (Zn) alcohol dehydrogenase TERM 3656 2356571 - 2356581 + r 85 -2.6 -5.81622 | opp_overlap 2356571 AACTTACTTAAATAA TTAT AAC ATAA TTTTTTTAATTTTCT BPUM_2348 2357815 - 2356595 - | major facilitator transporter TERM 3657 2357880 - 2357845 - R 100 -20.6 -5.60993 | opp_overlap 2357845 TTTGTCATAAAAAAA TCCCGCCCCCAAGACA TTTC TGTCTTGAGGACGGGA TTTACTCCGCGTTGC TERM 3658 2357845 - 2357880 + r 100 -16.2 -3.74747 | opp_overlap 2357845 TTTGTCATAAAAAAA TCCCGCCCCCAAGACA TTTC TGTCTTGAGGACGGGA TTTACTCCGCGTTGC BPUM_2349 2358937 - 2358188 - | short chain dehydrogenase/reductase TERM 3659 2359023 - 2359054 + r 75 -6.6 -4.46233 | gap 1, opp_overlap 2359023 2359020 TGAAACATAAAAGAA CACCCTCCAAGTGGT CAT GTCA-TAGGAGGGTG TTTCTTTGGGATTCA dhaT 2360230 - 2359067 - | 1,3-propanediol dehydrogenase TERM 3660 2359391 - 2359376 - G 75 -5.4 -4.79756 | opp_overlap 2359390, overlap 2359368 GACATAAGGCAAAAA TACCGC GTTT GCGATA CCATGAGGTGTATCA BPUM_2351 2361678 - 2360227 - | AGCS family alanine or glycine:sodium (Na+) or proton (H+) symporter TERM 3661 2360448 - 2360420 - G 89 -10.3 -3.93369 | overlap 2360405 GCAATTGCAATCAAA TTGACGATTGCCA TAA TGGCCATCGACAA GTCAGCCAACGTCCA ywqM 2361818 - 2362711 + | LysR family transcriptional regulator TERM 3662 2362726 - 2362739 + T 83 -3.9 -5.55664 | ATATGAAATATTGAT TTGAA CCGT TTCAA TTTTTTTCATCATCA BPUM_2353 2364886 - 2363168 - | multidrug ABC transporter ATP-binding protein TERM 3663 2363349 - 2363375 + g 71 -9.4 -2.98758 | overlap 2363344 CGGTTTTTCGTTAAC GCTTGAAGAGCA AGC TGCACTTCACGC TCTGATTCGTTATCT TERM 3664 2363779 - 2363758 - G 78 -9.5 -3.63837 | AGAATCGTTCAATAA GGGAAAACA TCGT CGTTTTCCC GCCACCACTCCGGCT BPUM_2354 2365449 - 2364886 - | hypothetical protein TERM 3665 2365686 - 2365699 + r 72 -5.3 -4.68506 | opp_overlap 2365686 TATTCGAAAAAACAT TTACC AGAG GGTAA TTTTTCAAATTACTT TERM 3666 2366149 - 2366124 - R 88 -11.1 -4.32177 | opp_overlap 2366124 2366126 2366140 TGATTCCACAATAAA GAGCCGACCCA TTTA TGGAGCGGCTC CTTTCATGTTAAAAA yycR 2367380 - 2366166 - | zinc (Zn) alcohol dehydrogenase TERM 3667 2366992 - 2367006 + g 72 -7.8 -3.84451 | TATCCATAGGCAGAG CCTGGA CGG TCCGGG TTTACATTTAAGCAC TERM 3668 2367680 - 2367699 + r 100 -10.8 -5.66868 | opp_overlap 2367671 2367680 ATATGACATGCAAAA GTCTCTTC TGAT GAAGAGAC TTTTTTTAATTCGTT TERM 3669 2367699 - 2367680 - R 88 -10.8 -4.2535 | opp_overlap 2367680, overlap 2367671 ATATGACATGCAAAA GTCTCTTC TGAT GAAGAGAC TTTTTTTAATTCGTT yrhH 2368403 - 2367801 - | methyltransferase BPUM_2357 2368671 - 2368796 + | hypothetical protein TERM 3670 2368799 - 2368838 + T 100 -21 -3.73775 | opp_overlap 2368804, overlap 2368804 CTGGATTTGCTAATG TAAAAGGAGCAGGAAACG ATAA CGTTTCCTGCTCCTTTTC TTTAATACCAATAAG TERM 3671 2368833 - 2368804 - T 100 -20.9 -4.27316 | opp_overlap 2368799 2368804 TTTGCTAATGTAAAA GGAGCAGGAAACG ATAA CGTTTCCTGCTCC TTTTCTTTAATACCA TERM 3672 2368804 - 2368833 + T 100 -20.9 -4.93877 | opp_overlap 2368804, overlap 2368799 TTTGCTAATGTAAAA GGAGCAGGAAACG ATAA CGTTTCCTGCTCC TTTTCTTTAATACCA yrzI 2369296 - 2369162 - | hypothetical protein TERM 3673 2369411 - 2369379 - R 93 -10.7 -4.96848 | GTGGGCACACAAAAA TGCAGATCAAAAGAC AGT GTCTTCCAACCTGCA ATGGATGATACGTAA TERM 3674 2369734 - 2369711 - R 91 -7.4 -5.3671 | opp_overlap 2369711 AATACAATCAAAAAA GCCCCCTCAC GATT ATGAGGAGAC TTTTCGAATTAATCT yrhC 2369982 - 2369743 - | hypothetical protein yrhB 2371194 - 2370046 - | cystathionine beta-lyase yrhA 2372119 - 2371196 - | cysteine synthase TERM 3675 2372141 - 2372168 + r 84 -11.4 -3.36188 | opp_overlap 2372124 2372146 2372149, overlap 2372146 CCCTTCCTTTGTATG GAAAAGAAGGGG GAAT CCCCTTCTTTTA TTGAGTTTGCTTTAT TERM 3676 2372146 - 2372163 + r 91 -11.3 -4.75309 | opp_overlap 2372124 2372146 2372149, overlap 2372141 CCTTTGTATGGAAAA GAAGGGG GAAT CCCCTTC TTTTATTGAGTTTGC TERM 3677 2372163 - 2372146 - R 86 -11.3 -4.18018 | opp_overlap 2372146 2372141, overlap 2372124 2372149 CCTTTGTATGGAAAA GAAGGGG GAAT CCCCTTC TTTTATTGAGTTTGC TERM 3678 2372160 - 2372149 - R 76 -7.2 -4.21812 | opp_overlap 2372146 2372141, overlap 2372146 TTGTATGGAAAAGAA GGGG GAAT CCCC TTCTTTTATTGAGTT mtnN 2372861 - 2372166 - | 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase yrrT 2373518 - 2372877 - | S-adenosylmethionine(SAM)-dependent methyltransferase yrzA 2373675 - 2373908 + | hypothetical protein TERM 3679 2373914 - 2373931 + T 100 -8.5 -6.01369 | opp_overlap 2373914 GAATATCTAAAAAAA GATAGCA TGAC TGCTATC TTTTTTTCTTGTTTA TERM 3680 2373931 - 2373914 - T 100 -8.5 -5.52909 | opp_overlap 2373914 GAATATCTAAAAAAA GATAGCA TGAC TGCTATC TTTTTTTCTTGTTTA yrrS 2374609 - 2373944 - | hypothetical protein TERM 3681 2374341 - 2374351 + g 78 -5.4 -5.07567 | TCGTCGTCTTGATCA GATG AGT CATC TTTTTTAGCATCTGA BPUM_2366 2376419 - 2374677 - | penicillin-binding protein TERM 3682 2376425 - 2376451 + r 100 -13.8 -4.0162 | opp_overlap 2376425, overlap 2376450 TTTTTAGCATAAAAA CACCTCGTCC CTATTGT GGACGAGGTG TTTATCGTATAAACG TERM 3683 2376451 - 2376425 - R 100 -13.8 -4.91109 | opp_overlap 2376425 2376450 TTTTTAGCATAAAAA CACCTCGTCC CTATTGT GGACGAGGTG TTTATCGTATAAACG greA 2376943 - 2376470 - | transcription elongation factor GreA TERM 3684 2377016 - 2377043 + H 71 -9.2 -2.70766 | opp_overlap 2377016 2377019, overlap 2377015 GACTGAAATATACAA GAATGAGGACTT TTTC AGGCCCTCATTC CTTCTGTCCCATATT TERM 3685 2377043 - 2377016 - H 79 -9.2 -3.77303 | opp_overlap 2377016 2377015, overlap 2377019 GACTGAAATATACAA GAATGAGGACTT TTTC AGGCCCTCATTC CTTCTGTCCCATATT TERM 3686 2377177 - 2377197 + H 74 -9.7 -2.74514 | opp_overlap 2377168 2377177 CACAAACTGTGGAAA GGCACAGGA AGC TCCTGTACC TCGTTCGCCATTTCG TERM 3687 2377197 - 2377177 - H 90 -11.9 -3.60074 | opp_overlap 2377177, overlap 2377168 CACAAACTGTGGAAA GGCACAGGA AGC TCCTGTACC TCGTTCGCCATTTCG TERM 3688 2377579 - 2377559 - H 100 -12.7 -4.11216 | opp_overlap 2377554, overlap 2377577 TTGTGATGTTGAAAA GACCTTTAC AGT GTAAAGGTC TCAGCTTGTAGACAA TERM 3689 2377583 - 2377605 + H 100 -15 -5.39721 | opp_overlap 2377577, overlap 2377554 AGTGTAAAGGTCTCA GCTTGTAGAC AAA GTCTACAAGC TTTTTTGTATAATAA TERM 3690 2378073 - 2378060 - g 75 -3.1 -5.18357 | gap 1, overlap 2378061 GAAGCGATGAAAAAA GGGCTC GTT GA-CCC GTCTATCGCCTTCAT TERM 3691 2378283 - 2378259 - g 100 -9.3 -5.02645 | overlap 2378263 AAGAAACAAAAGAAA TCAAGGTCAGT ACA ACTGACCCAGA GAGTGGCTATTATGT TERM 3692 2378279 - 2378263 - g 88 -10.9 -3.85719 | overlap 2378259 AACAAAAGAAATCAA GGTCAGT ACA ACTGACC CAGAGAGTGGCTATT TERM 3693 2378616 - 2378633 + G 80 -9.9 -3.73859 | ATTTTGATTGTTACA TTTGCCC CAAC GGGCAAA TTCTCTCTTATCGTA TERM 3694 2378891 - 2378881 - g 81 -5.4 -5.10933 | GGATGCAAAAGAAAA GCAT GGT ATGC GTTGGACGAAACTTC TERM 3695 2379002 - 2378977 - g 100 -13.4 -3.98747 | TAAAAAACTAGCAAA CTGGACATGG AAAGTA CCATGTCCAG CGTAAAACACATGAT BPUM_2368 2377652 - 2379007 + | transposase TERM 3696 2379079 - 2379033 - T 93 -4.7 -5.75342 | gap 2, opp_overlap 2379041, overlap 2379041 GTTTTTCAAAAAAAA TGT-GA-AAACCCCACTTTTACT TGA AGTAAAGGTAGGGTTTGTCTACG GTCTGAGACCTTTAC TERM 3697 2379041 - 2379069 + T 86 -11.1 -4.05747 | opp_overlap 2379041 2379033 AAAAAAATGTGAAAA CCCCACTTTTACT TGA AGTAAAGGTAGGG TTTGTCTACGGTCTG TERM 3698 2379069 - 2379041 - T 88 -11.1 -4.35095 | opp_overlap 2379041, overlap 2379033 AAAAAAATGTGAAAA CCCCACTTTTACT TGA AGTAAAGGTAGGG TTTGTCTACGGTCTG TERM 3699 2379086 - 2379106 + T 100 -12.7 -5.18726 | overlap 2379079 TTGTCTACGGTCTGA GACCTTTAC AGT GTAAAGGTC TTTTTCTTCTCCACC udk 2379756 - 2379124 - | uridine kinase yrrO 2381032 - 2379764 - | U32 family peptidase yrrN 2381982 - 2381053 - | U32 family peptidase yrrM 2382644 - 2381979 - | O-methyltransferase TERM 3700 2382832 - 2382806 - R 89 -5.9 -5.63103 | opp_overlap 2382804 2382806 TTCCAACGAAAAAAA CTGCAGGCAAT CTTGT ATTGTCTACAG TCTTTTTCGATTCAC yrrL 2383937 - 2382855 - | aminodeoxychorismate lyase TERM 3701 2383241 - 2383254 + g 73 -5.3 -4.58297 | CCATCGTTAACACAT CATGT ATGG ACATG TTTCTCTTTTTCATG yhfS 2385099 - 2384011 - | acetyl-CoA acetyltransferase yhfT 2386550 - 2385087 - | acyl-CoA synthetase TERM 3702 2385874 - 2385887 + g 78 -5.3 -4.91511 | AAGGCTTTCTTTGCT TTCAC TGGT GTGAA TTTTTCTAATAACGT yhfU 2387113 - 2386547 - | hypothetical protein yrzB 2387555 - 2387268 - | hypothetical protein yrrK 2387988 - 2387572 - | Holliday junction resolvase-like protein TERM 3703 2387649 - 2387672 + g 73 -3.8 -5.0538 | overlap 2387653 TTTTACGCTTTTGTC TGCTCACATC TGCA GAGATGAGCA TTTTTTCCGCTGCCA TERM 3704 2387857 - 2387883 + g 71 -8.7 -3.28188 | gap 1, opp_overlap 2387847 2387856, overlap 2387859 GACGATCTCAGACAG GC-GGCTGAGAC CGAA GTCTCCGCCTGC TTCATCAATTTTAAT TERM 3705 2387859 - 2387880 + g 72 -10.1 -2.81186 | opp_overlap 2387847 2387856, overlap 2387857 CGATCTCAGACAGGC GGCTGAGAC CGAA GTCTCCGCC TGCTTCATCAATTTT yrzL 2388270 - 2387992 - | hypothetical protein TERM 3706 2388143 - 2388153 + g 75 -3.2 -5.08601 | opp_overlap 2388124, overlap 2388125 2388124 ACAATTTGATTGATC GGGT TGT ATCC TTTTTCTTGGAGTGC alaS 2390985 - 2388349 - | alanyl-tRNA synthetase TERM 3707 2389662 - 2389681 + g 73 -7.2 -4.183 | gap 1 CTTGAACCTGCATAC TGC-CGACA TCT TGTCGCGCA TTTCTTGCACGTTCA TERM 3708 2390895 - 2390909 + g 71 -10 -2.58249 | overlap 2390894 2390886 GATCATCATGCGGTA CGAGTG AGG CACTCG GTTCTACAGCATGTC TERM 3709 2391081 - 2391035 - R 89 -6.7 -5.4387 | gap 2 ACACAAACGAAAAAA CACCCCG-CCCTATGCAAG-CAC AAA ACGACTTACACAGGGACGAGATG TTCTCGCGGTACCAC yrrI 2392386 - 2391322 - | hypothetical protein TERM 3710 2392350 - 2392338 - G 73 -9.1 -3.53767 | AAGATGCAAGGACAA GCAGG ACC CCTGC GGCATATATCAGAAA glnQ1 2392552 - 2393280 + | glutamine ABC transporter ATP-binding protein glnH 2393294 - 2394103 + | glutamine ABC transporter binding protein TERM 3711 2394716 - 2394735 + G 78 -4.4 -5.09204 | gap 1, overlap 2394719 CGCTTCTAGAACATT TGT-GACAT TTG ATGTCTACA TTTTTGTTGCCATGT glnM 2394171 - 2394824 + | glutamine ABC transporter membrane protein glnP 2394840 - 2395490 + | glutamine ABC transporter membrane protein TERM 3712 2395518 - 2395495 - T 100 -11.8 -5.28176 | gap 1, opp_overlap 2395491, overlap 2395496 GGCAGGCATAAAAAA GGACATCCGCT CTT AGCGGATG-CC TCAGTGTGTAGACAA TERM 3713 2395518 - 2395496 - T 100 -14.2 -3.76182 | opp_overlap 2395491, overlap 2395495 GCAGGCATAAAAAAG GACATCCGCT CTT AGCGGATGCC TCAGTGTGTAGACAA TERM 3714 2395685 - 2395647 - T 100 -21.4 -4.18506 | opp_overlap 2395653, overlap 2395653 TCACGCTGAAAAGAA GACAAAGGGCTAAAATAA AGA TCATTTTAGCCCTTTGTC AACAATCTGGGACAT TERM 3715 2395679 - 2395653 - T 100 -13.2 -4.45253 | opp_overlap 2395653, overlap 2395647 TGAAAAGAAGACAAA GGGCTAAAATAA AGA TCATTTTAGCCC TTTGTCAACAATCTG TERM 3716 2395653 - 2395679 + T 86 -11 -3.87373 | opp_overlap 2395653 2395647 TGAAAAGAAGACAAA GGGCTAAAATAA AGA TCATTTTAGCCC TTTGTCAACAATCTG TERM 3717 2395696 - 2395718 + T 100 -12 -5.49729 | overlap 2395698 TTGTCAACAATCTGG GACATCCGCT CTT AGCGGATGCC TTTTTTTACATCATT TERM 3718 2395698 - 2395716 + T 95 -13.2 -2.91842 | overlap 2395696 GTCAACAATCTGGGA CATCCGCT CTT AGCGGATG CCTTTTTTTACATCA BPUM_2386 2395855 - 2395724 - | hypothetical protein BPUM_2387 2396067 - 2395876 - | hypothetical protein yrrD 2396599 - 2396081 - | hypothetical protein TERM 3719 2396672 - 2396655 - R 89 -7.7 -5.15969 | opp_overlap 2396650 2396655 2396657 TTTCAAGCTAAAAAA GACTTCC ATCT GGAAGCC TTTTATTCATGCATA TERM 3720 2396655 - 2396672 + r 74 -5.5 -4.72497 | opp_overlap 2396655, overlap 2396650 2396657 TTTCAAGCTAAAAAA GACTTCC ATCT GGAAGCC TTTTATTCATGCATA TERM 3721 2396712 - 2396696 - R 73 -6.5 -4.27483 | ATGCATAAAATCAAA TGGAGTG ATT CCCTCCA TACCGATATTTGCAT recD 2399059 - 2396675 - | exodeoxyribonuclease V alpha subunit TERM 3722 2396824 - 2396837 + g 74 -6.7 -4.40561 | TTAAGGACGTTTGTC TGAGG GAAT CCTCA TTGTTTTTCACGCCC TERM 3723 2397219 - 2397244 + g 80 -4.8 -5.09426 | opp_overlap 2397219 CGGTACACCACATCA CCAAAAGG AATTTCTCGG CCTTTTGG TTTTTTAGGATTCAA yrrB 2399732 - 2399079 - | TPR repeat-containing protein TERM 3724 2399760 - 2399779 + r 75 -7.9 -4.08064 | opp_overlap 2399760 CCTTTCATTAAAAAA CCTCAAC AGCGAC GTTGAGG TTTTGAAAACAAGTT TERM 3725 2399779 - 2399760 - R 91 -8.6 -5.14563 | opp_overlap 2399760 CCTTTCATTAAAAAA CCTCAACA GCGA CGTTGAGG TTTTGAAAACAAGTT trmU 2400911 - 2399793 - | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase yrvO 2402149 - 2401007 - | bifunctional protein cysteine desulfurase/selenocysteine lyase yrzC 2402587 - 2402168 - | transcriptional regulator yrvN 2402797 - 2404062 + | recombination factor protein RarA TERM 3726 2404091 - 2404067 - T 100 -15 -5.93252 | opp_overlap 2404060 GCCAAAAATAAAAAA GCCCCCTGCC TAATT AGCAGGGGGC TGTCAGATTGTTGAC TERM 3727 2404104 - 2404142 + T 100 -19.2 -4.18506 | opp_overlap 2404110, overlap 2404110 GGCTGTCAGATTGTT GACAAAGGGCTAAAATGA TCT TGATTTTAGCCCTTTGTC TTCTTTTCAGCGTGA TERM 3728 2404110 - 2404136 + T 90 -11 -4.45253 | opp_overlap 2404110, overlap 2404104 CAGATTGTTGACAAA GGGCTAAAATGA TCT TGATTTTAGCCC TTTGTCTTCTTTTCA TERM 3729 2404136 - 2404110 - T 86 -11 -3.87373 | opp_overlap 2404104 2404110 CAGATTGTTGACAAA GGGCTAAAATGA TCT TGATTTTAGCCC TTTGTCTTCTTTTCA yrvM 2405056 - 2404292 - | ThiF/MoeB/HesA family protein aspS 2407191 - 2405407 - | aspartyl-tRNA synthetase TERM 3730 2406021 - 2406003 - G 73 -3.8 -5.07486 | overlap 2406010 TATCTGCAACAAAAA GTAAAAGG TCG CCTTCTTC GACTTGCAGCTTCTC TERM 3731 2406648 - 2406665 + g 75 -3.3 -5.08601 | GAACAAGATAGTCAC GTGCACC CTCT GGCGTAC TTTTTGTTAAGATCG TERM 3732 2408566 - 2408531 - R 100 -11.2 -5.4251 | opp_overlap 2408531 TGGACATATAAAAAA CCCCCGCCTCTACTAT GTGT ATAGTAGGGACGAGAG TTATACCCGTGGTGC BPUM_2398 2409021 - 2408851 - | hypothetical protein blyA 2409231 - 2410739 + | N-acetylmuramoyl-L-alanine amidase TERM 3733 2410739 - 2410768 + T 80 -8 -4.36914 | opp_overlap 2410746, overlap 2410746 ACAATATTTCCGTTA AAAAAAAGAGGC CACTGC GCCTCTTTTTTA TTTTGTCGCAAAAGA TERM 3734 2410761 - 2410746 - T 100 -6.1 -5.75342 | opp_overlap 2410739 2410746 TTCCGTTAAAAAAAA GAGGC CACTGC GCCTC TTTTTTATTTTGTCG TERM 3735 2410746 - 2410761 + T 100 -6.1 -5.86976 | opp_overlap 2410746, overlap 2410739 TTCCGTTAAAAAAAA GAGGC CACTGC GCCTC TTTTTTATTTTGTCG TERM 3736 2410825 - 2410788 - T 100 -7.9 -5.45802 | GTCGCAAAAGAAAAA GACTCTAAACAAACTCC TACA AGAGTTTATCTACAGTC TAAAGTGAATCTATT BPUM_2400 2411279 - 2410836 - | D-tyrosyl-tRNA deacylase relA 2413508 - 2411298 - | GTP diphosphokinase TERM 3737 2413632 - 2413613 - R 73 -2.8 -5.21709 | TTTGATAGGAAAAAA GCACCC TTCTTACC GAGTGC TTTTTGCGTAAAACT apt 2414163 - 2413651 - | adenine phosphoribosyltransferase recJ 2416511 - 2414187 - | recombination protein J TERM 3738 2416191 - 2416176 - G 73 -5.4 -4.66938 | ATCTGGAATATAAAA GTCTAC TTTC GCAGAC AACTCTTTTAATGTA TERM 3739 2416557 - 2416519 - R 76 -10.4 -2.77901 | gap 1, opp_overlap 2416519, overlap 2416516 AATAACATAAATTCA CCCCTCA-ACCACACTA TTATAC TAGAGTGGCCTGAGGGG TTTCAATTTTTATTT TERM 3740 2416519 - 2416557 + r 79 -8.2 -4.06851 | gap 1, opp_overlap 2416519 2416516 AATAACATAAATTCA CCCCTCA-ACCACACTA TTATAC TAGAGTGGCCTGAGGGG TTTCAATTTTTATTT yrvD 2416946 - 2416593 - | hypothetical protein TERM 3741 2417463 - 2417445 - R 100 -8.1 -5.38951 | opp_overlap 2417445 AATCTATAGAAAAAA GACTGCC AAACA GGCAGCC TTTCTCCATTAAATA secDF 2419700 - 2417472 - | bifunctional preprotein translocase subunit SecD/SecF TERM 3742 2418362 - 2418379 + g 70 -3.5 -4.89009 | gap 1, opp_overlap 2418362 2418363, overlap 2418363 GCTTGCTGACAAAAT C-CCATTT ATC AAATGGTG TTTTTGGTTCAGTAT TERM 3743 2418363 - 2418377 + g 72 -7.2 -4.06004 | opp_overlap 2418362 2418363, overlap 2418362 CTTGCTGACAAAATC CCATTT ATC AAATGG TGTTTTTGGTTCAGT TERM 3744 2418915 - 2418899 - G 73 -3.6 -4.92757 | GCATGAATAAGAAAA TGAGGG CAATT CCCACA ATCCCTGCAAAAACA TERM 3745 2419518 - 2419544 + g 88 -6.6 -5.09895 | CTCCACTGTACTGAC GAGGACACTATT TGT AATCTTGTCCTC TTTTTTCACTGGATG TERM 3746 2419688 - 2419677 - G 85 -5.8 -5.16071 | opp_overlap 2419676 AACCACTAAGAAAAA CGCA AGAA TGCG CCCTTTTTTCATTAT yrzD 2420038 - 2419742 - | hypothetical protein TERM 3747 2419814 - 2419794 - G 73 -3.9 -5.02074 | opp_overlap 2419812, overlap 2419795 TCACTGTCCAAAAAA GCAGACGTT TTA AACGACTGA ACGGTTGCATAGTTC TERM 3748 2421663 - 2421710 + G 91 -6.9 -5.41746 | gap 1, opp_overlap 2421666, overlap 2421666 GGTCTAGTGAAGAAA GAAGAGCT-GCGCCGCATCCCG TTGAT TGGGAAGCTGCTCTAGCTCATC TTTTTTTGACCACTT spoVB 2420142 - 2421704 + | stage V sporulation protein B yrbG 2422368 - 2421706 - | hypothetical protein TERM 3749 2421894 - 2421916 + g 84 -5.5 -5.26119 | CAATAAGTGGCAACT CAAGCGCTC CATGT GTGTGCTTG TTTTCTTTTTCAACA yrzE 2422534 - 2422911 + | hypothetical protein TERM 3750 2422935 - 2422917 - T 93 -3.9 -5.96894 | gap 1, opp_overlap 2422917 2422904 AGGCAAATAAAAAAA GAGCGGAT CTAT AT-CGCTC TTTTTTTTATGGCTA TERM 3751 2422917 - 2422935 + T 93 -3.9 -5.96219 | gap 1, opp_overlap 2422917, overlap 2422904 AGGCAAATAAAAAAA GAGCGGAT CTAT AT-CGCTC TTTTTTTTATGGCTA yajC 2423229 - 2422963 - | preprotein translocase subunit YajC tgt 2424422 - 2423277 - | queuine tRNA-ribosyltransferase TERM 3752 2424173 - 2424185 + g 80 -9.1 -3.93256 | AGTTCATAAATTTGT GCAGG CCG CCTGC TTCTTTCACAATGTC queA 2425481 - 2424453 - | S-adenosylmethionine:tRNA ribosyltransferase-isomerase BPUM_2414 2425716 - 2425516 - | hypothetical protein ruvB 2426713 - 2425709 - | Holliday junction DNA helicase B ruvA 2427330 - 2426725 - | Holliday junction DNA helicase motor protein TERM 3753 2427469 - 2427441 - R 84 -7.5 -4.79223 | gap 1, opp_overlap 2427441, overlap 2427434 TGACACCACGAAAAA CAGCTTGC-GGC CTTCAC ACCAGCAAGCTG TTATACGCGTTAAAA bofC 2427991 - 2427479 - | bypass-of-forespore protein C TERM 3754 2427637 - 2427625 - G 73 -9.1 -3.51994 | overlap 2427619 GAAAAAAGAGATGAA TGGGC TCC GCCCA GCCGTCAGGCCTTCC yrzF 2428217 - 2428861 + | hypothetical protein TERM 3755 2428885 - 2428867 - T 90 -11.7 -3.9941 | opp_overlap 2428861 2428860 CTCTGCATAATGAAA GCCGCTC TTACC GAGCGGC TTCAGATTGTTGACA TERM 3756 2428897 - 2428935 + T 100 -19.2 -4.18506 | opp_overlap 2428903, overlap 2428903 CGGCTTCAGATTGTT GACAAAGGGCTAAAATGA TTT TGATTTTAGCCCTTTGTC TTCTTTTCAGCGTGA TERM 3757 2428903 - 2428929 + T 90 -11 -4.45253 | opp_overlap 2428903, overlap 2428897 CAGATTGTTGACAAA GGGCTAAAATGA TTT TGATTTTAGCCC TTTGTCTTCTTTTCA TERM 3758 2428929 - 2428903 - T 86 -11 -3.87373 | opp_overlap 2428903 2428897 CAGATTGTTGACAAA GGGCTAAAATGA TTT TGATTTTAGCCC TTTGTCTTCTTTTCA TERM 3759 2429064 - 2429082 + T 100 -11.7 -4.61868 | TTGTCTACACGCTGA GCCGCTC TTACC GAGCGGC TTTTCTGTGTCAATC BPUM_2419 2429295 - 2429092 - | hypothetical protein BPUM_2420 2429472 - 2429618 + | hypothetical protein thiC 2431399 - 2429642 - | thiamine biosynthesis protein ThiC TERM 3760 2430921 - 2430931 + g 73 -8.2 -3.65991 | opp_overlap 2430921 TCTCTCACGAACTCA GGGC TTA GCCC TTCTCTTAAGGCGAT TERM 3761 2431483 - 2431460 - H 100 -8.9 -5.19212 | opp_overlap 2431460 AGCACCAGCAAAAAA CCAGGCTCT ATGAAA AGAACCTGG TTTCGTCGTTAGAAA TERM 3762 2432306 - 2432295 - g 74 -4.4 -4.9725 | ATGCCTATACAAAAA CAGA TTCA TCTG AATTTATGCTAGCAT BPUM_2422 2431874 - 2432506 + | homoserine/threonine resistance transporter TERM 3763 2432504 - 2432545 + T 100 -14.9 -3.30771 | gap 1, opp_overlap 2432512, overlap 2432512 ATCAAGGTTTATTTT TAAGAAAAGGCTAAAGTTCT TGA GGAACTTTAGCCTTTT-TTA TTCTCGAACCTATCG TERM 3764 2432538 - 2432512 - T 100 -13.9 -4.64676 | opp_overlap 2432512 2432504 TTATTTTTAAGAAAA GGCTAAAGTTC TTGAG GAACTTTAGCC TTTTTTATTCTCGAA TERM 3765 2432512 - 2432538 + T 100 -14.6 -5.55769 | opp_overlap 2432512, overlap 2432504 TTATTTTTAAGAAAA GGCTAAAGTTCT TGA GGAACTTTAGCC TTTTTTATTCTCGAA coxA 2433232 - 2432555 - | spore cortex protein CoxA TERM 3766 2433305 - 2433270 - R 90 -11.4 -3.91897 | opp_overlap 2433275 2433278, overlap 2433278 GCTGTCAGTTATAAA CAAAAAAAGGAACGAT TGAG ATCGCTCCTTCTTTTA TTACTCTTCTTCGTC TERM 3767 2433275 - 2433300 + r 72 -4.7 -4.79657 | opp_overlap 2433270 2433278, overlap 2433278 CAGTTATAAACAAAA AAAGGAACGAT TGAG ATCGCTCCTTC TTTTATTACTCTTCT TERM 3768 2433297 - 2433278 - R 100 -8.6 -6.02919 | opp_overlap 2433278 2433275, overlap 2433270 TTATAAACAAAAAAA GGAACGAT TGAG ATCGCTCC TTCTTTTATTACTCT TERM 3769 2433278 - 2433297 + r 75 -6.4 -4.47491 | opp_overlap 2433270 2433278, overlap 2433275 TTATAAACAAAAAAA GGAACGAT TGAG ATCGCTCC TTCTTTTATTACTCT safA 2434550 - 2433306 - | SpoVID-associated morphogenetic protein nadA 2435791 - 2434682 - | quinolinate synthetase TERM 3770 2435139 - 2435157 + g 70 -5.2 -4.53047 | TTAATGCGGGAAAGT GGCTGGTC GGT GATAAGCC TTTCTTCTATTTGAT nadC 2436641 - 2435778 - | nicotinate-nucleotide pyrophosphorylase nadB 2438197 - 2436623 - | L-aspartate oxidase TERM 3771 2437659 - 2437645 - G 79 -7.8 -4.36914 | CGCCCGTGGATAAAA CCACAG CAT CTGCGG TCATGGTATGTACGT yrxA 2439434 - 2439976 + | hypothetical protein TERM 3772 2440004 - 2439983 - T 100 -9.5 -5.9663 | AAAGACTAAAAAAAA TAGTGTCCA TTAT CGGACACTA TCAGATTGTTGACAA TERM 3773 2440015 - 2440053 + T 100 -14.8 -4.18506 | opp_overlap 2440021, overlap 2440021 CACTATCAGATTGTT GACAAAGGGCTAAATTGA TCT TGATTTTAGCCCTTTGTC TTCTTTTCAGCGTGA TERM 3774 2440021 - 2440047 + T 75 -6.6 -4.45253 | opp_overlap 2440021, overlap 2440015 CAGATTGTTGACAAA GGGCTAAATTGA TCT TGATTTTAGCCC TTTGTCTTCTTTTCA TERM 3775 2440180 - 2440209 + T 93 -13.8 -2.87354 | opp_overlap 2440184, overlap 2440184 GTTTGTCTACACGCT GAAATAGTGTCC TTTATC GGACACTATTTC TCATTCGTTAGTTCA TERM 3776 2440184 - 2440205 + T 79 -8.8 -4.10331 | opp_overlap 2440184, overlap 2440180 GTCTACACGCTGAAA TAGTGTCC TTTATC GGACACTA TTTCTCATTCGTTAG TERM 3777 2440205 - 2440184 - T 74 -8.8 -3.59262 | opp_overlap 2440184 2440180 GTCTACACGCTGAAA TAGTGTCC TTTATC GGACACTA TTTCTCATTCGTTAG pheA 2441081 - 2440203 - | prephenate dehydratase TERM 3778 2440460 - 2440471 + g 78 -5.8 -4.75174 | CCTTTGGCAGACTGA CGAC AATA GTCG TTTTTGGCTTCGATG TERM 3779 2440691 - 2440675 - G 81 -10.9 -3.28924 | TATTTCGCTGCATAA CCAGTTG ATT CAACTGG ACGGTGCGGAATATC TERM 3780 2440754 - 2440772 + g 74 -10.4 -2.6927 | overlap 2440756 2440761 GGGCAATCGCGTGCG GATGTGAT TGG ATCACATC TAATGTCTCCCAGCT pheB 2441543 - 2441100 - | hypothetical protein TERM 3781 2441594 - 2441566 - R 86 -8.8 -4.56597 | opp_overlap 2441566, overlap 2441568 CTCCCCTTTTAAAAA CGGGAGAGCCCA TGGAC TGGACCCTCCTG TTGATCAATCAATAA TERM 3782 2441592 - 2441568 - R 74 -10 -2.60032 | opp_overlap 2441566, overlap 2441566 CCCCTTTTAAAAACG GGAGAGCCCA TGGAC TGGACCCTCC TGTTGATCAATCAAT obg 2442885 - 2441599 - | GTPase ObgE spo0B 2443500 - 2442916 - | stage 0 sporulation initiation phosphotransferase B TERM 3783 2443718 - 2443754 + r 72 -9.5 -2.87146 | opp_overlap 2443718 2443727, overlap 2443727 ACTACTTGTAAAAAG TGAAAAAAACTCCAGTC AAT GACCGGAGTTTTTAGCA ATTATTGTGCCGCAG TERM 3784 2443754 - 2443718 - R 84 -11.7 -3.3581 | opp_overlap 2443718 2443727, overlap 2443727 ACTACTTGTAAAAAG TGAAAAAAACTCCAGTC AAT GACCGGAGTTTTTAGCA ATTATTGTGCCGCAG TERM 3785 2443727 - 2443745 + r 86 -8.8 -4.64144 | opp_overlap 2443727 2443718, overlap 2443718 AAAAAGTGAAAAAAA CTCCAGTC AAT GACCGGAG TTTTTAGCAATTATT TERM 3786 2443745 - 2443727 - R 100 -11 -5.63857 | opp_overlap 2443718 2443727, overlap 2443718 AAAAAGTGAAAAAAA CTCCAGTC AAT GACCGGAG TTTTTAGCAATTATT rpmA 2444040 - 2443756 - | 50S ribosomal protein L27 TERM 3787 2443943 - 2443959 + g 78 -9.5 -3.60296 | AATTGACCATCAGCA CGTTTAG CGC CTAAACG TTTAGACTCAGAGTC ysxB 2444334 - 2444053 - | hypothetical protein TERM 3788 2444397 - 2444416 + r 70 -2.9 -5.08824 | gap 1 CTTTGATCATATCAC TCACACGC CTTAA GCGT-TGA TTTTTTCGATAACAA rplU 2444714 - 2444406 - | 50S ribosomal protein L21 spoIVFB 2445735 - 2444866 - | stage IV sporulation M50 family membrane metalloprotease FB TERM 3789 2445450 - 2445430 - G 80 -4.6 -5.24531 | AGCCTCCATAAAAAA CCACGCCA TAAGC TGGAGCGG TACATGCTGAAGCGG spoIVFA 2446519 - 2445728 - | stage IV sporulation protein FA TERM 3790 2446411 - 2446423 + g 100 -7.7 -5.45652 | TTAACATGACCCATG GAGGA ATA TCCTC TTTTTTCTTGAAGGT TERM 3791 2446473 - 2446488 + g 70 -2.5 -4.9138 | ACTGAATGCTTCGTT TTGCG GCGCTG CGCGA TTTTCTTTCGGTACT TERM 3792 2446611 - 2446589 - R 100 -12.1 -5.12068 | opp_overlap 2446586 2446589 2446591 GATATGCAACAAAAA GACCGATTC TCACC GAATCGGTC TCGTCTTACCTAAAT TERM 3793 2446589 - 2446611 + r 86 -12.1 -2.76171 | opp_overlap 2446589, overlap 2446586 2446591 GATATGCAACAAAAA GACCGATTC TCACC GAATCGGTC TCGTCTTACCTAAAT minD 2447435 - 2446632 - | septum site determining protein TERM 3794 2447019 - 2447043 + g 75 -5.7 -4.59853 | opp_overlap 2447019 2447018 CGTCGTCACGACAAT TGCCTTATCTG CAC CAGATACAGCA TTTTTAAAGCCTTGC minC 2448121 - 2447438 - | septum formation inhibitor mreD 2448694 - 2448176 - | cell-shape determining protein TERM 3795 2448713 - 2448667 - G 84 -11.1 -3.70022 | gap 2, opp_overlap 2448675 2448678 2448683, overlap 2448665 2448662 CGAAGATAAACAACA TGACGAAAGCAAGAAGGACACGT CTC ACGAG-CCTTCCT-CCTTCGTCA ATACAGATGCATCTG mreC 2449590 - 2448691 - | cell-shape determining protein TERM 3796 2449275 - 2449285 + g 81 -5.4 -5.2291 | opp_overlap 2449272 TCACATAACCGAGCT GCTT GCG AAGC TTTTTGTTCTCATCT mreB 2450637 - 2449618 - | cell-shape determining protein TERM 3797 2450681 - 2450668 - R 77 -6.7 -4.54727 | TTTCTTAAACCAAAA TTCCC TTTA GGGAA AAACTCATAAACTCT radC 2451426 - 2450728 - | DNA repair protein RadC maf 2452020 - 2451451 - | Maf-like protein TERM 3798 2452184 - 2452149 - R 75 -7.9 -4.18197 | gap 1, opp_overlap 2452157, overlap 2452157 ATGTTGGATGCAAAA GAAA-AAAACTAGTCA TTTTT TGACTAGTTTCGTTTC TTAAAAAATGATTTT TERM 3799 2452175 - 2452157 - R 100 -7.5 -6.09196 | opp_overlap 2452157, overlap 2452149 TGCAAAAGAAAAAAA CTAGTCA TTTTT TGACTAG TTTCGTTTCTTAAAA TERM 3800 2452157 - 2452175 + r 79 -7.5 -4.21141 | opp_overlap 2452149 2452157 TGCAAAAGAAAAAAA CTAGTCA TTTTT TGACTAG TTTCGTTTCTTAAAA spoIIB 2453211 - 2452198 - | stage II sporulation protein B TERM 3801 2452667 - 2452679 + g 86 -3.3 -5.74288 | opp_overlap 2452667 2452668, overlap 2452668 ACAAAGGTTGATAAA CTGCC AGA GGCAC TTTTTTCTTCTTTGT BPUM_2447 2454105 - 2453386 - | A24 unassigned peptidase family protein TERM 3802 2454217 - 2454246 + r 100 -12.2 -4.41047 | opp_overlap 2454217 ATATAAAAAGAAAAA GACGCAAAAGGC ATCAAA GCCATTTGCGTC TTTTCGTTACCCAAT TERM 3803 2454246 - 2454217 - R 100 -12.2 -5.71295 | opp_overlap 2454217 ATATAAAAAGAAAAA GACGCAAAAGGC ATCAAA GCCATTTGCGTC TTTTCGTTACCCAAT folC 2455557 - 2454253 - | tetrahydrofolate synthase TERM 3804 2455613 - 2455587 - R 85 -7.3 -5.07107 | opp_overlap 2455587 GAAATTTTCAAAAAA GACGACTCC ATTTTGTTA GGAGCCGTC TTTTCAACCTTATGC valS 2458265 - 2455623 - | valyl-tRNA synthetase TERM 3805 2456253 - 2456263 + g 79 -6.8 -4.69656 | opp_overlap 2456252 TACATACGCAAGGAT CGAC CGA GTCG TTTTCTTCGCTGCTT TERM 3806 2456443 - 2456453 + g 78 -5.4 -4.95155 | GTTAAAATCCATTGG TCAG CAA CTGA TTTTTCTCCTATCAA TERM 3807 2458310 - 2458341 + H 86 -8.8 -4.59773 | opp_overlap 2458310 2458331 2458333 TGAAACATAAAAAAA GCCTTTTCATCCTT ATAA AAGGACGAAAAAGC TTTTTCGCGGTACCA TERM 3808 2458341 - 2458310 - H 100 -13.2 -5.88197 | opp_overlap 2458310, overlap 2458331 2458333 TGAAACATAAAAAAA GCCTTTTCATCCTT ATAA AAGGACGAAAAAGC TTTTTCGCGGTACCA BPUM_2450 2458723 - 2458911 + | hypothetical protein TERM 3809 2458977 - 2458953 - T 89 -10.1 -4.45115 | opp_overlap 2458952 2458951 2458945, overlap 2458950 ATGAACACAAAATAA CCTCGTCAT TCCGCTG ATGACGAGG CACTTTGTTCTTCTT ysxE 2459989 - 2458958 - | hypothetical protein TERM 3810 2459181 - 2459195 + g 70 -5.7 -4.35327 | opp_overlap 2459177 2459176, overlap 2459177 AACAAATGAAGCTCT TCCTC CCGAA GAGGA TTTCCTTTTTGATAC TERM 3811 2459810 - 2459775 - G 77 -6.3 -4.72201 | gap 2, overlap 2459776 2459805 CTTGAGAAAAAAGAA CCGCTC-TTCGT-CCGA TAAA TCGGCACAAAAGAGCGA TAGCCCTTTGATTCT spoVID 2461304 - 2460027 - | spore coat assembly protein SpoVID TERM 3812 2461431 - 2461410 - R 100 -13.1 -5.49569 | CAGCAACACAAAAAA GCCGATATG TCTC CATATCGGC GCAGCGTGTAGACAA TERM 3813 2461588 - 2461560 - R 100 -13.3 -4.18506 | opp_overlap 2461564 2461567 2461582 TCACGCTGAAAAGAA GACACAAGGCT GAAAACA AGCCTTGTGTC ATGATCAAAAGCCGA TERM 3814 2461582 - 2461638 + r 86 -9 -4.652 | gap 1, opp_overlap 2461560 2461599, overlap 2461564 2461594 2461599 GGCTGAAAACAAGCC TTGTGTC-ATGATCAAAAGCCGATATG TCTC CATATCGGCTTTCGTTTATCGACGTAG TTTTTGAAATACTTT TERM 3815 2461594 - 2461625 + r 100 -14.6 -3.88559 | opp_overlap 2461599, overlap 2461582 2461599 GCCTTGTGTCATGAT CAAAAGCCGATATG TCTC CATATCGGCTTTCG TTTATCGACGTAGTT TERM 3816 2461599 - 2461620 + r 100 -13.1 -4.13995 | opp_overlap 2461599, overlap 2461594 2461582 GTGTCATGATCAAAA GCCGATATG TCTC CATATCGGC TTTCGTTTATCGACG TERM 3817 2461620 - 2461599 - R 100 -13.1 -4.30576 | opp_overlap 2461599 2461594 2461582 GTGTCATGATCAAAA GCCGATATG TCTC CATATCGGC TTTCGTTTATCGACG hemL 2462919 - 2461627 - | glutamate-1-semialdehyde aminotransferase hemB 2463918 - 2462947 - | delta-aminolevulinic acid dehydratase hemD 2464706 - 2463915 - | uroporphyrinogen III synthase TERM 3818 2464088 - 2464054 - G 74 -7 -4.31397 | overlap 2464056 ATCGTCACAAAACAA GTGTCAGAAGCAGCTA GAT TCGCTGCATCTGCCTC CATAGCATGCATAAA hemC 2465638 - 2464703 - | porphobilinogen deaminase TERM 3819 2464997 - 2465011 + g 76 -10 -3.24747 | opp_overlap 2464989 2464988 CGTAAATTGAGCGAG GAGCTG CAA CAGCTC TTCATCATCTCCGCG hemX 2466510 - 2465680 - | cytochrome C biogenesis protein TERM 3820 2466419 - 2466384 - G 74 -6.9 -4.31164 | opp_overlap 2466385, overlap 2466385 GCCAGACAATAGAAA GCAACCAGAAAGCTA TTTTTC CAGCCTTCCGGTTGT GTTGAAGAAAATCTA TERM 3821 2466418 - 2466385 - G 77 -10.4 -3.17975 | opp_overlap 2466385, overlap 2466384 CCAGACAATAGAAAG CAACCAGAAAGCTA TTTTTC CAGCCTTCCGGTTG TGTTGAAGAAAATCT TERM 3822 2466443 - 2466431 - G 71 -4.9 -4.63218 | TTGTGTTGAAGAAAA TCTAT GAA ATAGA ACAAGACACTTAGTG hemA 2467885 - 2466518 - | glutamyl-tRNA reductase ysxD 2468128 - 2468613 + | hypothetical protein TERM 3823 2468629 - 2468651 + T 100 -9.2 -6.08342 | opp_overlap 2468629 CTTATACAATAAAAA GGCATCTG CTCATGA CAGATGCC TTTTTTTATTTATTA TERM 3824 2468651 - 2468629 - T 100 -9.9 -5.24796 | opp_overlap 2468629 CTTATACAATAAAAA GGCATCTGC TCATG ACAGATGCC TTTTTTTATTTATTA ysxC 2469244 - 2468657 - | GTPase EngB lonA 2471565 - 2469241 - | class III heat-shock ATP-dependent Lon protease TERM 3825 2470988 - 2470998 + g 77 -4.6 -5.0538 | ATTAAGCTGATGACC CGGT TCA GCCG TTTTTTAACATCCAC TERM 3826 2471736 - 2471718 - R 91 -8.9 -5.15634 | TATTTCACTAAAAAA TCCCCAT ATGTG ATGGGGA TTAAACAGATTTTCT lonB 2473398 - 2471737 - | ATP-dependent protease TERM 3827 2473523 - 2473499 - R 100 -13 -5.73978 | opp_overlap 2473521 ACGATAAATAAAAAA CTCCTGAATC AAAAA GATTCAGGAG TGAGACAACTCTTAT clpX 2474800 - 2473535 - | ATP-dependent protease ATP-binding subunit TERM 3828 2475042 - 2474997 - R 77 -6.3 -4.78752 | gap 1, opp_overlap 2475002 2475007 2475010, overlap 2475007 ATGATAAGTCAAAAA TTGT-ACAAAACAAGGCACGAG TCA CTCGCGCCCTGTTTTATTATTA TGCACCATATTAACG TERM 3829 2475002 - 2475036 + r 81 -10 -3.7941 | opp_overlap 2474997 2475007, overlap 2475007 2475010 AAGTCAAAAATTGTA CAAAACAAGGCACGAG TCA CTCGCGCCCTGTTTTA TTATTATGCACCATA TERM 3830 2475007 - 2475031 + r 93 -9.9 -4.95547 | opp_overlap 2474997 2475007, overlap 2475002 2475010 AAAAATTGTACAAAA CAAGGCACGAG TCA CTCGCGCCCTG TTTTATTATTATGCA TERM 3831 2475031 - 2475007 - R 100 -14.3 -4.47485 | opp_overlap 2475007 2475002 2475010, overlap 2474997 AAAAATTGTACAAAA CAAGGCACGAG TCA CTCGCGCCCTG TTTTATTATTATGCA TERM 3832 2475010 - 2475028 + r 75 -10.2 -3.03769 | opp_overlap 2475007 2474997, overlap 2475007 2475002 AATTGTACAAAACAA GGCACGAG TCA CTCGCGCC CTGTTTTATTATTAT tig 2476326 - 2475052 - | trigger factor ysoA 2477573 - 2476566 - | hypothetical protein TERM 3833 2477691 - 2477662 - R 100 -15.1 -5.08824 | gap 1, opp_overlap 2477662 2477665 TTTTCATGCAAAAAA GAAGCCGTCACACC TCG GGCG-GACGGCTTC TTGTTGTTTACGCAC TERM 3834 2477662 - 2477691 + r 100 -12.9 -4.08557 | gap 1, opp_overlap 2477662, overlap 2477665 TTTTCATGCAAAAAA GAAGCCGTCACACC TCG GGCG-GACGGCTTC TTGTTGTTTACGCAC TERM 3835 2477665 - 2477688 + r 79 -8.8 -4.16033 | gap 1, opp_overlap 2477662, overlap 2477662 TCATGCAAAAAAGAA GCCGTCACACC TCG GGCG-GACGGC TTCTTGTTGTTTACG TERM 3836 2477706 - 2477722 + r 72 -9.4 -2.80245 | overlap 2477705 CTTGTTGTTTACGCA CGCAGC CAGCT GCTGCG CTTATCTTCAAATGC leuD 2478298 - 2477699 - | isopropylmalate isomerase small subunit leuC 2479727 - 2478312 - | isopropylmalate isomerase large subunit leuB 2480865 - 2479768 - | 3-isopropylmalate dehydrogenase TERM 3837 2480685 - 2480710 + g 100 -6.9 -5.62219 | gap 1, opp_overlap 2480688, overlap 2480688 CGCTCTTGCATACAT CAA-CCGTTTCC TTT GGGAGCGGATTG TTTTTTTCATCTATT TERM 3838 2480688 - 2480706 + g 73 -8.8 -3.49295 | opp_overlap 2480688, overlap 2480685 TCTTGCATACATCAA CCGTTTCC TTT GGGAGCGG ATTGTTTTTTTCATC leuA 2482437 - 2480884 - | 2-isopropylmalate synthase TERM 3839 2482290 - 2482280 - G 71 -6.8 -4.16842 | TGTACGCCTAAGAAA TCCC CTC GGGA TGAAGCGGGAAAACC TERM 3840 2482290 - 2482313 + g 77 -11 -2.73875 | opp_overlap 2482295, overlap 2482295 AGAAATCCCCTCGGG ATGAAGCGGG AAAA CCCGCTTCAA TGATATTAACCCCAA TERM 3841 2482308 - 2482295 - G 72 -9.5 -3.14132 | opp_overlap 2482290 2482295 TCCCCTCGGGATGAA GCGGG AAAA CCCGC TTCAATGATATTAAC TERM 3842 2482295 - 2482308 + g 72 -9.5 -3.13432 | opp_overlap 2482295, overlap 2482290 TCCCCTCGGGATGAA GCGGG AAAA CCCGC TTCAATGATATTAAC ilvC 2483452 - 2482424 - | ketol-acid reductoisomerase TERM 3843 2483476 - 2483487 + r 73 -3 -5.27476 | CTCCTTTTGTTTAGA CAAT TGAA ATTG TTTTATTTTGTTGCG ilvH 2483989 - 2483471 - | acetolactate synthase 3 regulatory subunit ilvB 2485710 - 2483986 - | acetolactate synthase catalytic subunit TERM 3844 2484101 - 2484112 + g 71 -4.4 -4.89521 | TCTCTAGAGGTTAGC GCTT CTTC AAGC TTTTCTTTCGCCTCT BPUM_2473 2487002 - 2486088 - | branched-chain amino acid aminotransferase TERM 3845 2488020 - 2488010 - g 74 -4.6 -4.89521 | ACATTTGAAACAAAA CCAG GCA CCGG GCCTCGCCATATCAC BPUM_2474 2487437 - 2488480 + | 6-phosphogluconolactonase TERM 3846 2488506 - 2488489 - T 100 -11.3 -5.33848 | opp_overlap 2488484 AGGATAATGAAAAAA GCCTCCA ACTG TGGAGGC TTCAGATTGTTGACA TERM 3847 2488518 - 2488556 + T 100 -19.2 -4.18506 | opp_overlap 2488524, overlap 2488524 AGGCTTCAGATTGTT GACAAAGGGCTAAAATGA TCT TGATTTTAGCCCTTTGTC TTCTTTTCAGCGTGA TERM 3848 2488524 - 2488550 + T 90 -11 -4.45253 | opp_overlap 2488524, overlap 2488518 CAGATTGTTGACAAA GGGCTAAAATGA TCT TGATTTTAGCCC TTTGTCTTCTTTTCA TERM 3849 2488550 - 2488524 - T 86 -11 -3.87373 | opp_overlap 2488524 2488518 CAGATTGTTGACAAA GGGCTAAAATGA TCT TGATTTTAGCCC TTTGTCTTCTTTTCA TERM 3850 2488686 - 2488703 + T 100 -11.3 -5.18371 | TGTCTACACGCTGAA GCCTCCA ACTG TGGAGGC TTTTCTTTTATGCAG BPUM_2475 2489130 - 2488711 - | hypothetical protein TERM 3851 2489222 - 2489205 - R 100 -11.3 -5.38054 | opp_overlap 2489205 2489204 2489205 TTCGACAAACAAAAA GCAGCAG AAAG CTGCTGC ATTCTACTGCTCTGT TERM 3852 2489205 - 2489222 + r 78 -11.3 -2.67456 | opp_overlap 2489205, overlap 2489204 2489205 TTCGACAAACAAAAA GCAGCAG AAAG CTGCTGC ATTCTACTGCTCTGT dltD 2490392 - 2489226 - | D-alanine esterase DltD TERM 3853 2489574 - 2489597 + g 73 -3.8 -4.91873 | opp_overlap 2489574, overlap 2489576 2489590 CATCTTTTTCATAAT CGGTTTCAGC TTGC GCTCAAACAG TTTTTGATTAATATA TERM 3854 2489938 - 2489958 + g 75 -10.5 -2.75064 | opp_overlap 2489936, overlap 2489935 TTATTATAAGCGAGA TTCAGTGCT TGA AGCGCTGAA TAGTTCGGTGCAAAG TERM 3855 2490372 - 2490355 - G 71 -8.4 -3.45909 | overlap 2490353 CCAATGAATAGAACA GCCGCT AAAATA AGCGGC CCAAAAAAACGCTTT dltC 2490628 - 2490392 - | D-alanine--poly(phosphoribitol) ligase subunit 2 dltB 2491834 - 2490650 - | D-alanine esterase DltB dltA 2493336 - 2491831 - | D-alanine--D-alanyl carrier protein ligase BPUM_2480 2493494 - 2493351 - | D-Ala-teichoic acid biosynthesis protein TERM 3856 2493873 - 2493891 + G 79 -6.8 -4.62085 | ATTGAACTAAATGTT TCGAATTT AAA GAATTCGA TTATTTTTTGGGGGT BPUM_2481 2493834 - 2494229 + | glyoxalase TERM 3857 2494276 - 2494255 - T 91 -7.3 -5.42975 | opp_overlap 2494258, overlap 2494258 CTAGAGAAATAAAAA GAACCCATG ATTT CATGGGTTT CTCGTCATTCCATGA TERM 3858 2494273 - 2494258 - T 88 -9 -4.76311 | opp_overlap 2494258, overlap 2494255 GAGAAATAAAAAGAA CCCATG ATTT CATGGG TTTCTCGTCATTCCA TERM 3859 2494258 - 2494273 + T 79 -9 -4.02022 | opp_overlap 2494258 2494255 GAGAAATAAAAAGAA CCCATG ATTT CATGGG TTTCTCGTCATTCCA TERM 3860 2494453 - 2494434 - T 79 -4.2 -5.27477 | gap 1, opp_overlap 2494435, overlap 2494435 AGGTTAATTAAAAAA CGCCCTTCC AAT GGA-GGGCT GTGCTATTAACTATT TERM 3861 2494452 - 2494435 - T 72 -7.7 -3.75402 | gap 1, opp_overlap 2494435, overlap 2494434 GGTTAATTAAAAAAC GCCCTTCC AAT GGA-GGGC TGTGCTATTAACTAT BPUM_2482 2494639 - 2494460 - | hypothetical protein BPUM_2483 2494814 - 2495002 + | hypothetical protein TERM 3862 2495015 - 2495037 + F 100 -7 -5.71712 | TAACTCCTCTTCTTG GGAGCTGT CGTTTAT GCAGCTCC TTTTTTTATGTGAAC BPUM_2484 2495174 - 2496715 + | transposase BPUM_2485 2496741 - 2497076 + | hypothetical protein TERM 3863 2497080 - 2497112 + F 79 -10.6 -3.35298 | opp_overlap 2497081 2497086, overlap 2497081 2497086 AGTGATGAATAACTA AGAAAAGCCCCTCC ATGTC GGAAGGGCTTTTCA TTACTGCTTTACTTC TERM 3864 2497111 - 2497081 - f 100 -17 -3.56142 | opp_overlap 2497080 2497081 2497086, overlap 2497086 GTGATGAATAACTAA GAAAAGCCCCTCCA TGT CGGAAGGGCTTTTC ATTACTGCTTTACTT TERM 3865 2497081 - 2497111 + F 91 -14.1 -2.60456 | opp_overlap 2497081 2497086, overlap 2497080 2497086 GTGATGAATAACTAA GAAAAGCCCCTCC ATGTC GGAAGGGCTTTTC ATTACTGCTTTACTT TERM 3866 2497106 - 2497086 - f 91 -11.1 -4.84262 | opp_overlap 2497081 2497080 2497086, overlap 2497081 GAATAACTAAGAAAA GCCCCTCCA TGT CGGAAGGGC TTTTCATTACTGCTT TERM 3867 2497086 - 2497106 + F 83 -8.2 -4.47217 | opp_overlap 2497086 2497081, overlap 2497081 2497080 GAATAACTAAGAAAA GCCCCTCC ATGTC GGAAGGGC TTTTCATTACTGCTT TERM 3868 2497528 - 2497539 + G 71 -4.4 -4.75518 | CTATTGGGGCTGTTG CACT TGCT AGTG TTTTAATTTTATCTG BPUM_2487 2497413 - 2497610 + | hypothetical protein TERM 3869 2497758 - 2497790 + F 100 -18.7 -5.64873 | opp_overlap 2497758 CCAACAAACAAAAAA GCCTGAAATCCTTTA TAG TAAAGGGTTTCAGGC TTTTTTCTTATTACG TERM 3870 2497790 - 2497758 - f 100 -16.5 -5.80003 | opp_overlap 2497758 CCAACAAACAAAAAA GCCTGAAATCCTTTA TAG TAAAGGGTTTCAGGC TTTTTTCTTATTACG BPUM_2488 2497974 - 2498954 + | dehydrogenase TERM 3871 2499291 - 2499269 - T 81 -3.3 -5.64274 | overlap 2499271 2499276 2499281 TCATTGATAAAAAAA CAGGGAACG GAACT CGCTCCCAA AACCCTGTTTTGAAG TERM 3872 2499289 - 2499271 - T 83 -8.1 -4.46105 | overlap 2499269 2499276 2499281 ATTGATAAAAAAACA GGGAACG GAACT CGCTCCC AAAACCCTGTTTTGA TERM 3873 2499315 - 2499276 - T 79 -10.2 -3.38522 | gap 1, overlap 2499271 2499269 2499281 TAAAAAAACAGGGAA CGGAACTCGCTCCCAAAAC CCT GTTTTG-AAGCGAGTTGCA AACTTAAGTTCCAAG TERM 3874 2499310 - 2499281 - T 80 -10.9 -3.2128 | gap 1, overlap 2499271 2499269 2499276 AAACAGGGAACGGAA CTCGCTCCCAAAAC CCT GTTTTG-AAGCGAG TTGCAAACTTAAGTT TERM 3875 2499336 - 2499378 + T 100 -16.6 -2.8552 | opp_overlap 2499341, overlap 2499341 AAGTTCCAAGAAACA AAAAAGCCTGAAATCCTTGA TAA TAAAGGATTTCAGGCTTTTA ATTTAATACGTCCCA TERM 3876 2499341 - 2499373 + T 100 -16.5 -4.58773 | opp_overlap 2499341, overlap 2499336 CCAAGAAACAAAAAA GCCTGAAATCCTTGA TAA TAAAGGATTTCAGGC TTTTAATTTAATACG TERM 3877 2499373 - 2499341 - T 100 -16.5 -5.80003 | opp_overlap 2499336 2499341 CCAAGAAACAAAAAA GCCTGAAATCCTTGA TAA TAAAGGATTTCAGGC TTTTAATTTAATACG TERM 3878 2499556 - 2499589 + T 85 -12 -2.54523 | gap 1, opp_overlap 2499551 2499564, overlap 2499564 2499564 TTTTTCGAAAGTTTT TTTCATAAGGG-GCA AATGC TGCACCCTTATGAAA TACCTTCCAATGTGA ysnB 2500106 - 2499582 - | phosphoesterase ysnA 2500714 - 2500121 - | HAM1 protein rph 2501462 - 2500734 - | ribonuclease PH TERM 3879 2501563 - 2501585 + r 79 -6.3 -4.93318 | gap 1, opp_overlap 2501563 GCTTGGAATAAAAAA GAGGCA-GCG AATA TGCATGCCTC TTTTTCTCCATTATA TERM 3880 2501585 - 2501563 - R 83 -5.6 -5.4505 | gap 1, opp_overlap 2501563 GCTTGGAATAAAAAA GAGGCA-GC GAATAT GCATGCCTC TTTTTCTCCATTATA gerM 2502675 - 2501614 - | spore germination protein M TERM 3881 2502779 - 2502753 - R 93 -7.3 -5.60993 | opp_overlap 2502753 2502756 CTTTTCATAAAAAAA TAACCCACCTC AAGAA GAAGGGGGTTA TTGCTGATAGACATG racE 2503595 - 2502777 - | glutamate racemase ysmB 2504043 - 2503603 - | MarR family transcriptional regulator gerE 2504416 - 2504192 - | spore germination protein E TERM 3882 2504606 - 2504578 - R 100 -9.7 -5.252 | gap 1, opp_overlap 2504578, overlap 2504543 TATCCGCACAAAAAA GGACGA-GTCTC CTACCT GAGACATCGTCC TTTTTATACACGTAT TERM 3883 2504578 - 2504606 + r 91 -9.7 -4.84761 | gap 1, opp_overlap 2504543 2504578 TATCCGCACAAAAAA GGACGA-GTCTC CTACCT GAGACATCGTCC TTTTTATACACGTAT BPUM_2496 2505938 - 2504622 - | CitMHS family citrate-magnesium (Mg2+):proton (H+) citrate-calcium (Ca2+): proton (H+) symporter yraN 2506951 - 2506091 - | LysR family transcriptional regulator yraM 2507087 - 2508217 + | hypothetical protein TERM 3884 2508239 - 2508219 - T 84 -11.2 -3.72485 | opp_overlap 2508219 AAAGAGAAGCCTAAA GCAGACGA GAACA TCGTCTGC TTTTTTTAATGTTGA TERM 3885 2508219 - 2508239 + T 100 -11.2 -5.63374 | opp_overlap 2508219 AAAGAGAAGCCTAAA GCAGACGA GAACA TCGTCTGC TTTTTTTAATGTTGA BPUM_2499 2508964 - 2508245 - | biotin-(acetyl-CoA carboxylase) ligase TERM 3886 2508342 - 2508329 - G 72 -8.1 -3.84648 | CTGAAGATGACCAAA GCGGT TAAC ACCGC AGCAAATGCCTTCTT ysmA 2509504 - 2509043 - | thioesterase TERM 3887 2509352 - 2509330 - G 70 -7.8 -3.71848 | overlap 2509349 TCCGTTTATCAACAA TGCCTGTTTT TTG AAAAAAGGCA ATGCGCGCCTCTTCA TERM 3888 2509361 - 2509349 - G 70 -2.6 -5.00616 | overlap 2509330 TGTTTTTTGAAAAAA GGCA ATGCG CGCC TCTTCAAAATACACA TERM 3889 2509532 - 2509556 + r 100 -11.4 -4.49906 | opp_overlap 2509532 TTAATTGGAACAAAA CGCCTCTCCC ATATC GGAAGAGGCG TTTGTTTAAATATTG TERM 3890 2509556 - 2509532 - R 100 -14.3 -4.68103 | opp_overlap 2509532 TTAATTGGAACAAAA CGCCTCTCCCA TAT CGGAAGAGGCG TTTGTTTAAATATTG sdhB 2510389 - 2509625 - | succinate dehydrogenase iron-sulfur subunit sdhA 2512151 - 2510391 - | succinate dehydrogenase flavoprotein subunit TERM 3891 2511128 - 2511149 + g 75 -5.1 -4.78764 | overlap 2511130 2511132 2511143 2511146 TTTTCATTGGAAGCT TACGTGGGT CATC ACCCATGAA TTTTTCATAGATTTC TERM 3892 2511967 - 2511983 + g 82 -6.6 -4.78848 | opp_overlap 2511967, overlap 2511962 TCAAAATGCTCATAA GGTGAA TCCCC TTCACC TTTTGTATTTACCGC sdhC 2512797 - 2512189 - | succinate dehydrogenase cytochrome b558 subunit TERM 3893 2513204 - 2513230 + G 75 -8.8 -3.73224 | TCATCTATGATGTAT TTTGCGGGTAAG CTA CTTGCTCGTAAA TTTCCTCAAGAGTCA TERM 3894 2513379 - 2513400 + G 73 -5.1 -4.71426 | opp_overlap 2513396, overlap 2513381 CCTATCAAAAGGAGC CATGCTTTC AGAT GGAAGCAGG TTTTATTGCTGAACA yslB 2513078 - 2513521 + | hypothetical protein TERM 3895 2513536 - 2513557 + T 88 -3.5 -5.7827 | opp_overlap 2513524 2513522 2513536, overlap 2513539 ACACCCTTTATGAAA GGCGCGGAC TTTA GGTCACGCC TTTTTTGTTTGTCTT TERM 3896 2513679 - 2513651 - T 85 -6.1 -5.49569 | gap 1, opp_overlap 2513651 TACGAATATAAAAAA GAGGTGCA-CTC TTTCAT GAGATACACCTC CTTTTTGTTTTAAGA lysC 2514918 - 2513689 - | aspartate kinase TERM 3897 2515005 - 2515031 + r 81 -9.5 -4.00038 | opp_overlap 2515005 CTGCAAATAAAAAAA GCAATGAGAGA ACAGA TCTCCCATTGC TTTATAATCATCATC TERM 3898 2515031 - 2515005 - R 100 -11.7 -5.95539 | opp_overlap 2515005 CTGCAAATAAAAAAA GCAATGAGAGA ACAGA TCTCCCATTGC TTTATAATCATCATC uvrC 2517072 - 2515300 - | excinuclease ABC subunit C TERM 3899 2516443 - 2516456 + g 71 -2.3 -5.10497 | overlap 2516444 AAACTCTAGTTGTTC GGCAG CTTC CTGCA TTTTTTCGGTGAGTT TERM 3900 2517153 - 2517178 + r 95 -13.3 -3.09015 | opp_overlap 2517153 CATATTGAAAGAAAA GCGGCTCTCGT CTTT ACGAGAACCGC TTCAGTGAGTATGCC TERM 3901 2517178 - 2517153 - R 100 -15.5 -4.92385 | opp_overlap 2517153 CATATTGAAAGAAAA GCGGCTCTCGT CTTT ACGAGAACCGC TTCAGTGAGTATGCC trxA 2517526 - 2517212 - | thioredoxin TERM 3902 2517244 - 2517270 + g 88 -11 -3.89614 | opp_overlap 2517242 2517267 CAAGCTCAGCAAGTG CTTCTTTTGGTT TGA AACCAACAGAAG TTTCTACCACTTCGC abfA 2519250 - 2517772 - | alpha-N-arabinofuranosidase TERM 3903 2518155 - 2518141 - G 73 -8.6 -3.61178 | TTGATGCACTTGAAA CATGTG AAA CACATG ATACGTCGGGGTCAG TERM 3904 2519315 - 2519292 - R 100 -8.2 -5.76633 | opp_overlap 2519292 TTACATACAAAAAAA CCCAGAATAC CTAG GCATTCTGAG TGTATGAGCGTTACG etfA 2520303 - 2519326 - | electron transfer flavoprotein alpha subunit etfB 2521121 - 2520348 - | electron transfer flavoprotein beta subunit ysiB 2521931 - 2521152 - | enoyl-CoA hydratase ysiA 2522542 - 2521958 - | transcriptional regulator TERM 3905 2522700 - 2522677 - R 100 -13.2 -3.76373 | CGGTCAACATTCAAA TCATCCGGCC TGTG GACCGGATGA TGAACGACTATGTTT lcfA2 2524429 - 2522708 - | long-chain-fatty-acid--CoA ligase TERM 3906 2523278 - 2523297 + g 100 -11.4 -4.67982 | ATCTGTATTAGGCCA CGGGCAGC CAAT GCTGCCTG TTTTGTTCGCTCCCC TERM 3907 2523662 - 2523650 - G 79 -3.3 -5.24989 | overlap 2523622 GTAGACATGAAAAAA CGGAA TGA TGCCG AGGATGCGTTCTTTC TERM 3908 2524470 - 2524495 + r 79 -4.7 -5.31275 | TACTATTATATTATA GCAAACTTTTC CTTA GGGCAGTTTGC TTTTTTCTAATAGGG BPUM_2514 2524986 - 2524531 - | hypothetical protein TERM 3909 2525010 - 2525049 + r 77 -5.8 -4.76088 | gap 1, opp_overlap 2525018, overlap 2525018 TCGCCGCCTTTGATG AGATA-AAAGCTGTCAAGG GTT CCCTGACAGCTTTCTAACG TTGTTTTTTCATTTC TERM 3910 2525018 - 2525040 + r 95 -12 -3.95653 | opp_overlap 2525018, overlap 2525010 TTTGATGAGATAAAA GCTGTCAAGG GTT CCCTGACAGC TTTCTAACGTTGTTT TERM 3911 2525040 - 2525018 - R 100 -14.2 -4.57353 | opp_overlap 2525018 2525010 TTTGATGAGATAAAA GCTGTCAAGG GTT CCCTGACAGC TTTCTAACGTTGTTT yshE 2525554 - 2525150 - | hypothetical protein mutS2 2527929 - 2525569 - | recombination and DNA strand exchange inhibitor protein TERM 3912 2525834 - 2525844 + g 80 -4.6 -5.1963 | TCTTTCCCTTTAACT GCCG TGA TGGC TTTTTCTTGCTTAAA TERM 3913 2526012 - 2526024 + g 75 -3.3 -5.09895 | CGTCGCCTGACTTCA GCTGT CTT ACTGC TTTTTTCGCTGGCTC yshC 2529660 - 2527948 - | hypothetical protein TERM 3914 2529752 - 2529771 + r 83 -7.9 -4.62783 | opp_overlap 2529752 2529768 TGGAATGAGAAAAAA CTTCTCC AAGATA GGAGAAG TTTTTAAACTCCATA TERM 3915 2529771 - 2529752 - R 100 -7.9 -5.37345 | opp_overlap 2529752, overlap 2529768 TGGAATGAGAAAAAA CTTCTCC AAGATA GGAGAAG TTTTTAAACTCCATA yshB 2530308 - 2529775 - | hypothetical protein yshA 2530573 - 2530316 - | hypothetical protein TERM 3916 2531252 - 2531237 - g 79 -7.6 -4.28774 | TGAGCCAAGGGAAAA TGAAGG CGCT CCTTCA CAACCAAGTGATCAC rnhC 2530708 - 2531631 + | ribonuclease HIII TERM 3917 2531676 - 2531623 - T 79 -4.2 -5.30575 | gap 3, opp_overlap 2531636, overlap 2531636 CAAAAAGCGAAAAAA TGGTTATA-AAAAA-GAGCT-AGGCCA ATA CGGCCTTAGCTCTTTTTTCTTTAACCG CGCAAGACGGCTTGA TERM 3918 2531661 - 2531636 - T 100 -10.5 -5.25803 | gap 1, opp_overlap 2531636, overlap 2531623 AATGGTTATAAAAAA GAGCT-AGGCCA ATA CGGCCTTAGCTC TTTTTTCTTTAACCG TERM 3919 2531636 - 2531661 + T 100 -9.8 -5.63517 | gap 1, opp_overlap 2531636 2531623 AATGGTTATAAAAAA GAGCT-AGGCC AATAC GGCCTTAGCTC TTTTTTCTTTAACCG pheT 2534084 - 2531670 - | phenylalanyl-tRNA synthetase subunit beta pheS 2535134 - 2534100 - | phenylalanyl-tRNA synthetase subunit alpha TERM 3920 2534575 - 2534585 + g 76 -6.8 -4.55887 | CAAATGATTTTCACA GGAC CTT GTCC TTTATATTTTTCAAG TERM 3921 2535209 - 2535237 + r 74 -8.8 -3.41051 | opp_overlap 2535209 GAAGACAATAAAAAA CCCGTCCCCTCT AGAAA AGAAGGGACGAG TTGTGGTCGCGGTAC TERM 3922 2535237 - 2535209 - R 100 -13.2 -5.64304 | opp_overlap 2535209 GAAGACAATAAAAAA CCCGTCCCCTCT AGAAA AGAAGGGACGAG TTGTGGTCGCGGTAC ysgA 2536254 - 2535511 - | SpoU rRNA methylase family TERM 3923 2536332 - 2536316 - H 78 -7.3 -4.41716 | overlap 2536317 ACACTACATAATAAA CCTGTCT TTG AGACAGA ATAGGGCTATCACCA TERM 3924 2536331 - 2536317 - H 72 -8.6 -3.23945 | overlap 2536316 CACTACATAATAAAC CTGTCT TTG AGACAG AATAGGGCTATCACC sspI 2536368 - 2536589 + | small acid-soluble spore protein SspI TERM 3925 2536595 - 2536622 + T 100 -15.7 -4.98531 | opp_overlap 2536595 GCAGCAATAAAAAAA GCCGGTTTGCT TATCAT AGCAAACCGGC TTTTTCATTTAGCCA TERM 3926 2536622 - 2536595 - T 100 -15.7 -5.84381 | opp_overlap 2536595 GCAGCAATAAAAAAA GCCGGTTTGCT TATCAT AGCAAACCGGC TTTTTCATTTAGCCA cstA 2538427 - 2536631 - | carbon starvation-induced protein TERM 3927 2537026 - 2537013 - G 74 -6.7 -4.38141 | CCCCACATAAAACAA GCAAG CGCA CTTGC GAACACCGACCCAGG TERM 3928 2537113 - 2537103 - G 71 -6.8 -4.0825 | opp_overlap 2537101 2537103 TCTTGAATTAAATAA CGTG CCA CACG TGTTCCTGCATCAAT BPUM_2526 2538612 - 2538457 - | hypothetical protein TERM 3929 2538570 - 2538596 + g 73 -2.9 -5.24551 | overlap 2538571 CCATAAACTCTCTTT TGACAGGGCAT TCTTT AGGCTCTGTCC TTTTTATTGCTTTCA TERM 3930 2538783 - 2538733 - R 95 -14.3 -2.64155 | opp_overlap 2538746, overlap 2538739 2538746 TTCCTGGGAAATTCA CTGAAATAAAAAAGCCCTTCCCC TATTT GAGGAAAGGCTTTCTTACTTAAG AACCGTACGTGATCT TERM 3931 2538777 - 2538739 - R 100 -14.1 -3.70076 | opp_overlap 2538746, overlap 2538733 2538746 GGAAATTCACTGAAA TAAAAAAGCCCTTCCCC TATTT GAGGAAAGGCTTTCTTA CTTAAGAACCGTACG TERM 3932 2538770 - 2538746 - R 100 -10 -5.65927 | opp_overlap 2538746, overlap 2538739 2538733 CACTGAAATAAAAAA GCCCTTCCCC TATTT GAGGAAAGGC TTTCTTACTTAAGAA ysdC 2539867 - 2538779 - | M42 family glutamyl aminopeptidase TERM 3933 2539328 - 2539344 + g 77 -3.7 -5.2189 | GATACGGTTGTCCCA TGCTTTT GCA AGGAGCA TTTTTTCATCATTCA TERM 3934 2540137 - 2540116 - g 76 -8.1 -4.09243 | TACATGGCGGTAAAA TTCTTCTCA AATC CGAGAAGAA AGCTGAAACAAGCAC TERM 3935 2540383 - 2540350 - g 77 -6.1 -4.62302 | GAAGACTTTGAAAAA TTGGAGGAAAACATT ATCG AACGTTATCCTCAAA CAAAAATTGATTGGG TERM 3936 2540403 - 2540390 - g 80 -3.9 -5.27938 | overlap 2540392 ATCCTCAAACAAAAA TTGAT TGGG ATCAA CCCATTAAAAAAATC ysdB 2540047 - 2540451 + | hypothetical protein TERM 3937 2540468 - 2540427 - T 100 -11.8 -5.10516 | gap 2, opp_overlap 2540431, overlap 2540431 AAAAATCAAACAAAA GAAAGGAGCAGATACGCCGT CTTG ACGGCG--TCTGCTCCTTTT TCAGATGAACTGATA TERM 3938 2540431 - 2540464 + T 100 -12.6 -4.62336 | gap 2, opp_overlap 2540431 2540427 ATCAAACAAAAGAAA GGAGCAGATACGCCGT CTTG ACGGCG--TCTGCTCC TTTTTCAGATGAACT TERM 3939 2540464 - 2540431 - T 100 -12.6 -4.98352 | gap 2, opp_overlap 2540431, overlap 2540427 ATCAAACAAAAGAAA GGAGCAGATACGCCGT CTTG ACGGCG--TCTGCTCC TTTTTCAGATGAACT ysdA 2540732 - 2540469 - | hypothetical protein TERM 3940 2540762 - 2540784 + r 74 -6.3 -4.57474 | opp_overlap 2540762 ATGATGAGCAAAAAA GATCATCCC TCGAC GGAATGATC TTTTATATGACTTAC TERM 3941 2540784 - 2540762 - R 100 -8.5 -5.19212 | opp_overlap 2540762 ATGATGAGCAAAAAA GATCATCCC TCGAC GGAATGATC TTTTATATGACTTAC rplT 2541155 - 2540796 - | 50S ribosomal protein L20 rpmI 2541387 - 2541187 - | 50S ribosomal protein L35 TERM 3942 2542035 - 2542011 - R 100 -8.6 -5.31519 | ACAGGCAAACAAAAA GTGTGGGCAT ATAAA ACACCCACAC TGCGAACATTTGCAT ysbB 2542955 - 2542260 - | antiholin-like protein LrgB TERM 3943 2542679 - 2542661 - G 70 -3.8 -4.85599 | overlap 2542663 GTGATCCTACAAAAA TAGCGGAT AAA ATCTGCCA CCAATATTTTTTAAG ysbA 2543413 - 2542970 - | murein hydrolase regulator LrgA TERM 3944 2543575 - 2543537 - R 76 -7 -4.35044 | gap 1, opp_overlap 2543537 2543561, overlap 2543544 GTATTGAAATACAAA TAAAAAAGCCG-TCCTA TTCTAG TAGGAGCGACTTCTTTA GTTCTTTGGCGTACG TERM 3945 2543568 - 2543544 - R 85 -2.9 -5.7827 | gap 1, opp_overlap 2543537 2543561, overlap 2543537 AATACAAATAAAAAA GCCG-TCCTA TTCTAG TAGGAGCGAC TTCTTTAGTTCTTTG lytT 2544287 - 2543550 - | response regulator lytS 2546041 - 2544284 - | sensor histidine kinase ysaA 2546217 - 2546996 + | HAD family phosphatase TERM 3946 2547011 - 2547036 + T 89 -4 -5.75478 | gap 1, opp_overlap 2547006 2547003 2547011, overlap 2547003 GAACAAACGAGAAAA CACCC-TTCTC CTAAC GAGATTGGGTG TTTTTTTGTGTACTT BPUM_2538 2547984 - 2547055 - | methyl-accepting chemotaxis protein TERM 3947 2548131 - 2548090 - R 100 -12.5 -4.08945 | opp_overlap 2548093 2548096, overlap 2548076 2548096 AGGATTTTCCCAAAA GAAAAAGCCAGTGATCT AATGAGAA AGATCACTGGCTGCTTC GCTTGAAAAAATTTA TERM 3948 2548096 - 2548125 + r 86 -12.3 -2.78712 | opp_overlap 2548076 2548090 2548096, overlap 2548093 TTCCCAAAAGAAAAA GCCAGTGATCT AATGAGAA AGATCACTGGC TGCTTCGCTTGAAAA TERM 3949 2548125 - 2548096 - R 100 -12.3 -5.45802 | opp_overlap 2548096 2548093, overlap 2548076 2548090 TTCCCAAAAGAAAAA GCCAGTGATCT AATGAGAA AGATCACTGGC TGCTTCGCTTGAAAA thrS 2550084 - 2548144 - | threonyl-tRNA synthetase TERM 3950 2549617 - 2549628 + g 85 -5.8 -5.09173 | opp_overlap 2549616 2549617 TAATTGATCACCAAT CGCT TCAA AGCG TTTTTTCGCGTCTTC TERM 3951 2550141 - 2550117 - R 100 -12.1 -5.0916 | opp_overlap 2550117 TTGGCAATATAAAAA CCCCGCCCCCT GGA AAGGGACGAGG TTGAATAAAACGGAA ytxC 2551290 - 2550421 - | hypothetical protein ytxB 2551989 - 2551351 - | hypothetical protein dnaI 2552952 - 2552023 - | primosomal protein DnaI TERM 3952 2552975 - 2552985 + r 71 -3.2 -5.02231 | TCACCTCTTCTTAAT GTGC ATT GTAC TTTTTCATATTTTTA dnaB 2554394 - 2552970 - | replicative DNA helicase TERM 3953 2554460 - 2554502 + r 83 -8.7 -4.35958 | gap 2, opp_overlap 2554471, overlap 2554471 GCGTTTTACGCTTTA CGCAGGAAAAAGAGCGTGAAG AAT CTTCA-GCTCTTTTTTA-GCG TTCTTTCTTTAATAA TERM 3954 2554492 - 2554471 - R 87 -8.1 -4.7497 | gap 1, opp_overlap 2554460 2554471 TTTACGCAGGAAAAA GAGCGTGAAG AAT CTTCA-GCTC TTTTTTAGCGTTCTT TERM 3955 2554471 - 2554492 + r 91 -8.1 -5.11937 | gap 1, opp_overlap 2554471, overlap 2554460 TTTACGCAGGAAAAA GAGCGTGAAG AAT CTTCA-GCTC TTTTTTAGCGTTCTT BPUM_2545 2555345 - 2554959 - | hypothetical protein TERM 3956 2555417 - 2555395 - R 93 -4.2 -5.94713 | ATTTTATAAAAAAAA CCTTTGTTTT CCT AGAACAAAAG TATAGGCAAGTTGGG TERM 3957 2555510 - 2555469 - R 79 -4.6 -5.30448 | gap 2, opp_overlap 2555485, overlap 2555480 AAACAAATATAAAAA GGAGCATAACACAAAGGCAT GTCA ATGCTTTTG-GCCA-GCTCC CATTGCGATCTTTTT speD 2555915 - 2555532 - | S-adenosylmethionine decarboxylase proenzyme gapB 2557169 - 2556147 - | glyceraldehyde-3-phosphate dehydrogenase TERM 3958 2557344 - 2557321 - R 89 -3.9 -5.75599 | opp_overlap 2557321 2557324, overlap 2557324 TAAAGCATAAAAAAA GAAGAGTAC TTGTAT GTACTCTTA CTTATCTGTATGTTC TERM 3959 2557341 - 2557324 - R 76 -5.6 -4.9041 | opp_overlap 2557324 2557321, overlap 2557321 AGCATAAAAAAAGAA GAGTAC TTGTAT GTACTC TTACTTATCTGTATG coaE 2557947 - 2557342 - | dephospho-CoA kinase ytaF 2558594 - 2557962 - | hypothetical protein TERM 3960 2558090 - 2558078 - G 71 -3.4 -5.07275 | overlap 2558087 CGATACATACAAAAA GTGA ACTCA TCAC TGCGACCGTGATACT mutM 2559601 - 2558771 - | formamidopyrimidine-DNA glycosylase TERM 3961 2559127 - 2559138 + g 78 -2.2 -5.54192 | GCAGTGCTGTTTTGA CGAC ACGT GTTG TTTTTTTCAATTGCT TERM 3962 2559437 - 2559408 - G 80 -10.1 -3.58801 | opp_overlap 2559407 2559404 2559413, overlap 2559413 ACATAATGGTCTAAA TGAAAGAGGAGGA ACTT CCCTCTTCTTTCA ATGGTTTGTATGGTT polA 2562269 - 2559630 - | DNA polymerase I TERM 3963 2561745 - 2561757 + g 70 -7.7 -3.70511 | opp_overlap 2561738, overlap 2561743 GTCAATGATTTGATC TGGTC GCA GACCA TATTTCTCTTCAATA TERM 3964 2562285 - 2562304 + r 100 -13.6 -3.24976 | overlap 2562283 GTTTTAATCCTCCAT CGGCTGAG CCAT CTCAGCCG TCTCTTTCACACATT TERM 3965 2562407 - 2562379 - R 100 -10.4 -5.24531 | opp_overlap 2562383, overlap 2562380 AGCCTGCATAAAAAA GGGACGAAAACA ACATG TGTTTTCGTCCT TCCAAAATTGGCTCC TERM 3966 2562406 - 2562380 - R 100 -13.9 -3.73995 | opp_overlap 2562383, overlap 2562379 GCCTGCATAAAAAAG GGACGAAAACA ACATG TGTTTTCGTCC TTCCAAAATTGGCTC phoR 2564265 - 2562523 - | sensor histidine kinase PhoR phoP 2564986 - 2564258 - | response regulator PhoP TERM 3967 2565160 - 2565135 - R 100 -10.5 -5.27335 | opp_overlap 2565135 TTTTGTAAACAAAAA GAAGACTCCTC ATAC GAGAAGCCTTC TTTTTTATTCATATT TERM 3968 2565135 - 2565160 + r 89 -6.1 -5.54885 | opp_overlap 2565135 TTTTGTAAACAAAAA GAAGACTCCTC ATAC GAGAAGCCTTC TTTTTTATTCATATT mdh 2566112 - 2565174 - | malate dehydrogenase icd 2567418 - 2566147 - | isocitrate dehydrogenase TERM 3969 2567457 - 2567487 + r 86 -8.4 -4.6856 | opp_overlap 2567457 AGTGAATATTTGAAA CTTCTTAGCTTG ATGTCTG CAAGCGAAGAAG TTTTTCACGTGTTTC TERM 3970 2567487 - 2567457 - R 73 -8.4 -3.6707 | opp_overlap 2567457 AGTGAATATTTGAAA CTTCTTAGCTTG ATGTCTG CAAGCGAAGAAG TTTTTCACGTGTTTC citZ 2568684 - 2567566 - | methylcitrate synthase TERM 3971 2568184 - 2568202 + g 78 -9.6 -3.65425 | TGCCTCAATTTCTAC TGGTGAAG GCT CTTCGCCA TTTAGCATATATAAG TERM 3972 2569057 - 2569036 - g 100 -9.5 -6.32976 | opp_overlap 2569036 AAAAAAATAAAAAAA GAAAGTGGT ATGA ACCACTCTC TTTTCAACCGCTGAA TERM 3973 2569036 - 2569057 + G 73 -7.3 -4.08767 | opp_overlap 2569036 AAAAAAATAAAAAAA GAAAGTGGT ATGA ACCACTCTC TTTTCAACCGCTGAA BPUM_2557 2568838 - 2569071 + | hypothetical protein ytwI 2569525 - 2569061 - | hypothetical protein ytvI 2569626 - 2570744 + | sporulation integral membrane protein YtvI TERM 3974 2570768 - 2570747 - T 86 -8.8 -4.68645 | opp_overlap 2570747 CATGCAAAAGTAAAA GAGACCTT TAGTTC AAGGTCTC TTTAGCGAATAATTG TERM 3975 2570747 - 2570768 + T 74 -8.8 -3.56568 | opp_overlap 2570747 CATGCAAAAGTAAAA GAGACCTT TAGTTC AAGGTCTC TTTAGCGAATAATTG ytzA 2571159 - 2570770 - | FxsA TERM 3976 2571063 - 2571083 + g 100 -10.5 -4.49337 | opp_overlap 2571060 2571063 GTACGATCAACAGCA TCGTTGGCA AAA TGCCAATGA TTTTACTTGATATTA TERM 3977 2571250 - 2571227 - R 100 -9.6 -5.80817 | opp_overlap 2571226 2571229 TGTAACATAAAAAAA GAGAGGAGTC AGAC AACTCCCCTC GTGTGTATCATTTAT pyk 2573022 - 2571262 - | pyruvate kinase pfkA 2574009 - 2573050 - | 6-phosphofructokinase TERM 3978 2574271 - 2574259 - R 76 -4.9 -5.13722 | TTTATGAAAACAAAA GAAAA TTA TTTTC AAATAGCGCTTACAT TERM 3979 2574349 - 2574320 - R 100 -8 -5.69023 | gap 1, opp_overlap 2574320 2574324 2574327 AAAAGATGAAAAAAA TAAACGC-CAGCC AAAAA GGCTGTACGTTTA TTTAGTTTACCCCAA accA2 2575328 - 2574351 - | acetyl-CoA carboxylase carboxyltransferase subunit alpha accD 2576188 - 2575313 - | acetyl-CoA carboxylase subunit beta TERM 3980 2576199 - 2576212 + r 90 -6.7 -5.63517 | GACAAATGACTACCT CCCTT TTTG AAGGG TTTTTTCTTTACACG BPUM_2565 2577725 - 2576493 - | malate dehydrogenase dnaE 2581202 - 2577867 - | DNA polymerase III DnaE TERM 3981 2580899 - 2580913 + g 82 -8.6 -4.30034 | CTTTTGATTTTGATT TCAGCA CAC TGCTGA TTTTGATCAAGTTTT ytrH 2581340 - 2581681 + | sporulation protein YtrH TERM 3982 2581751 - 2581762 + G 71 -4.4 -4.78661 | TGTTTGGCGCGATTG TGAG CTGG CTCA TTTTCCTTTTTACAT ytrI 2581678 - 2582181 + | sporulation protein YtrI BPUM_2569 2582291 - 2582476 + | hypothetical protein TERM 3983 2582528 - 2582500 - T 100 -13.9 -5.1861 | opp_overlap 2582502 2582505 2582527 TCCATGACCAAAAAA GAGAGAGGGGACT TGA ATCCCCCTCTCTC ATGATGATGATTTAC ytqI 2583468 - 2582527 - | hypothetical protein ytpI 2583616 - 2583918 + | hypothetical protein TERM 3984 2583961 - 2583922 - T 70 -7.4 -3.82824 | gap 1, opp_overlap 2583924 2583929, overlap 2583929 GATCACGCATAATAA GAGAGAAGGGCTAAAATGA TGT TTATTTTAGCCCTT-TGTC TTTTTCATCATCATC TERM 3985 2583924 - 2583961 + T 91 -10.9 -4.78107 | gap 1, opp_overlap 2583922 2583929, overlap 2583929 TCACGCATAATAAGA GA-GAAGGGCTAAAATGA TGT TTATTTTAGCCCTTTGTC TTTTTCATCATCATC TERM 3986 2583955 - 2583929 - T 84 -11 -3.78442 | opp_overlap 2583924 2583929, overlap 2583922 CATAATAAGAGAGAA GGGCTAAAATGA TGT TTATTTTAGCCC TTTGTCTTTTTCATC TERM 3987 2583929 - 2583955 + T 100 -13.2 -4.58297 | opp_overlap 2583929 2583922, overlap 2583924 CATAATAAGAGAGAA GGGCTAAAATGA TGT TTATTTTAGCCC TTTGTCTTTTTCATC ytoI 2585308 - 2583986 - | CBS domain-containing protein TERM 3988 2584794 - 2584815 + g 74 -9.5 -3.36327 | CGGTTAATGAGTGCT GCTACGGTA AATG TATCGTAGC TTGTCGATAAGATCG TERM 3989 2585420 - 2585439 + r 70 -4.9 -4.66953 | opp_overlap 2585421, overlap 2585421 ATGTAAATAAAAAAA ACCGGCA ATTGAG TGCCGGC TTTTTGCGATGTTGA TERM 3990 2585421 - 2585438 + r 71 -8.4 -3.39449 | opp_overlap 2585421, overlap 2585420 TGTAAATAAAAAAAA CCGGCA ATTGAG TGCCGG CTTTTTGCGATGTTG TERM 3991 2585438 - 2585421 - R 100 -8.4 -6.23545 | opp_overlap 2585421 2585420 TGTAAATAAAAAAAA CCGGCA ATTGAG TGCCGG CTTTTTGCGATGTTG ytkL 2586138 - 2585455 - | metal-dependent hydrolase TERM 3992 2585926 - 2585947 + g 70 -5.1 -4.42235 | overlap 2585923 AGTGGCAAGCTCGAA TGGCGCAAT AACG AGTGCGTCA TTATTTTTGGCGATT fabG2 2586960 - 2586205 - | 3-ketoacyl-(acyl-carrier-protein) reductase BPUM_2575 2587969 - 2587067 - | hypothetical protein TERM 3993 2588060 - 2588079 + r 73 -6.4 -4.30978 | opp_overlap 2588060 CCCCAAGACAAAAAA CCATCCGT ATCA ACGAATGG TTTTGGTCAGTTACG TERM 3994 2588079 - 2588060 - R 100 -8.6 -5.47159 | opp_overlap 2588060 CCCCAAGACAAAAAA CCATCCGT ATCA ACGAATGG TTTTGGTCAGTTACG argH 2589463 - 2588090 - | argininosuccinate lyase argG 2590671 - 2589460 - | argininosuccinate synthase TERM 3995 2590811 - 2590834 + r 80 -11.1 -3.10946 | opp_overlap 2590811, overlap 2590809 2590808 CCTTTATGAAAAAAA CTCTGCCAA ATTTTC TTGGCAGAG TCATTTTGGGCTATT TERM 3996 2590834 - 2590811 - R 100 -11.8 -5.52384 | opp_overlap 2590811 2590809 2590808 CCTTTATGAAAAAAA CTCTGCCAAA TTTT CTTGGCAGAG TCATTTTGGGCTATT TERM 3997 2591420 - 2591458 + r 100 -11.9 -4.63479 | opp_overlap 2591420 2591427, overlap 2591410 2591427 ATGCTGCTTTTAATA GAAAAAAGCTCTTTTCC TTATT GGAAAAGAGCTTCTTCC TTTTCATTTATGCTA TERM 3998 2591458 - 2591420 - R 100 -16.3 -3.01791 | opp_overlap 2591410 2591420 2591427, overlap 2591427 ATGCTGCTTTTAATA GAAAAAAGCTCTTTTCC TTATT GGAAAAGAGCTTCTTCC TTTTCATTTATGCTA TERM 3999 2591451 - 2591427 - R 100 -13 -5.47159 | opp_overlap 2591410 2591427 2591420, overlap 2591420 TTTTAATAGAAAAAA GCTCTTTTCC TTATT GGAAAAGAGC TTCTTCCTTTTCATT TERM 4000 2591427 - 2591451 + r 100 -13 -3.9901 | opp_overlap 2591420 2591427, overlap 2591410 2591420 TTTTAATAGAAAAAA GCTCTTTTCC TTATT GGAAAAGAGC TTCTTCCTTTTCATT ackA 2592650 - 2591466 - | acetate kinase TERM 4001 2592399 - 2592385 - G 76 -10 -3.38812 | opp_overlap 2592373 2592382 2592385, overlap 2592383 CCGCCGTGAACAACA CGGTGT CCT ACACCG TCAATTTCATTAAAG TERM 4002 2592385 - 2592399 + g 71 -10 -2.70979 | opp_overlap 2592385 2592383, overlap 2592373 2592382 CCGCCGTGAACAACA CGGTGT CCT ACACCG TCAATTTCATTAAAG TERM 4003 2592880 - 2592863 - R 93 -7 -5.64873 | opp_overlap 2592861 2592858 2592863 CTGAATAATAAAAAA GCCAGA CATCAC TCTGGC TATTCTTTCGTTTCT ytxK 2593854 - 2592880 - | adenine specific DNA methyltransferase TERM 4004 2593437 - 2593451 + g 75 -8.6 -3.89524 | opp_overlap 2593429 CATCAATTTCAGATG CAAAGC CGC GCTTTG TTTCTGCAGTCAGAT TERM 4005 2593928 - 2593904 - R 73 -7.1 -4.18018 | opp_overlap 2593904 2593895 2593894 TGTTCTCATTGAAAA GAGCCCCAG TATGAAG CCGGAGCTC TTGTCGATGCTGCTT tpx 2594444 - 2593944 - | thiol peroxidase TERM 4006 2594533 - 2594553 + r 86 -8.3 -4.61633 | opp_overlap 2594533 GCTTTTGAAAAAAAA GTTAACTGC AGC GCAGCTAAC TTTTTAAAGGTCTAT TERM 4007 2594553 - 2594533 - R 100 -10.5 -5.75342 | opp_overlap 2594533 GCTTTTGAAAAAAAA GTTAACTGC AGC GCAGCTAAC TTTTTAAAGGTCTAT ytfJ 2595009 - 2594557 - | sporulation protein YtfJ TERM 4008 2594798 - 2594817 + g 95 -5.8 -5.59962 | gap 1 AGTCTCGGTTCTTTT CGTTCTTGA TCA TCA-GAACG TTTTTCTTTCTTTTG ytfI 2595731 - 2595024 - | hypothetical protein TERM 4009 2595823 - 2595797 - R 100 -17.4 -5.71983 | opp_overlap 2595797 CCAATCATAAAAAAA GAGTTTGACCGG TAC CCGGCCAAACTC TTCTGATTATACGTT TERM 4010 2595797 - 2595823 + r 100 -15.2 -3.57441 | opp_overlap 2595797 CCAATCATAAAAAAA GAGTTTGACCGG TAC CCGGCCAAACTC TTCTGATTATACGTT yteJ 2596351 - 2595830 - | hypothetical protein TERM 4011 2596002 - 2595988 - G 74 -5 -4.86731 | opp_overlap 2595983, overlap 2595983 TTTCTCTAAAGAAAA TGACAT CCC ATGCCA GTTTCTTCTCAGGTT sppA 2597367 - 2596366 - | peptidase TERM 4012 2597424 - 2597438 + H 80 -2.8 -5.58209 | overlap 2597425 TTTGCATGAAATGTT TCACAG GAA TTGTGG TTTTTTTACATTTCA TERM 4013 2598047 - 2598063 + G 70 -3.7 -4.8622 | opp_overlap 2598047 TCAAAAACAGAGAAT TCGCA TCTATAC TGCGA TTTTTCATTAGAACA BPUM_2586 2597813 - 2598616 + | inorganic polyphosphate/ATP-NAD kinase TERM 4014 2598618 - 2598642 + F 93 -10.8 -5.08255 | opp_overlap 2598623, overlap 2598623 GCAGATTCCTTTAAT CAAAAGCTCC TTTAT GGGGCTTTTG TTTTCTTTTCAGCGT TERM 4015 2598623 - 2598637 + F 82 -4.9 -5.40279 | opp_overlap 2598623, overlap 2598618 TTCCTTTAATCAAAA GCTCC TTTAT GGGGC TTTTGTTTTCTTTTC TERM 4016 2598775 - 2598789 + F 85 -4.9 -5.62219 | opp_overlap 2598775 GTCTACACGCTGAAA GCTCC TTTAT GGGGC TTTTTTTCATGTCTT TERM 4017 2599031 - 2599050 + G 73 -10 -2.94137 | gap 1, opp_overlap 2599031, overlap 2599030 CTGGTAGTGGCAAGA CGGCA-GCC TAT GGCCTGCCG ATTTGTGAAATGGTT TERM 4018 2599050 - 2599031 - g 73 -10 -3.04144 | gap 1, opp_overlap 2599031 2599030 CTGGTAGTGGCAAGA CGGCA-GCC TAT GGCCTGCCG ATTTGTGAAATGGTT TERM 4019 2599250 - 2599236 - g 100 -6.4 -5.60993 | GCTTGCACAAAAAAA CCACAT TGT ATGCGG AACACCTGGACGAGT BPUM_2587 2598868 - 2600310 + | DEAD/DEAH box family ATP-dependent RNA helicase TERM 4020 2600334 - 2600314 - f 74 -5.4 -4.84359 | opp_overlap 2600314 GCACGTTCATAAAAA GTGAAGGC TAAGC GCCTTTAC TTTTTTATTTAAATT TERM 4021 2600314 - 2600334 + F 100 -7.6 -5.67283 | opp_overlap 2600314 GCACGTTCATAAAAA GTGAAGGC TAAGC GCCTTTAC TTTTTTATTTAAATT des 2600498 - 2601553 + | fatty acid desaturase TERM 4022 2601560 - 2601589 + F 85 -11.6 -3.60151 | overlap 2601563 AATGCATAATTGGTG CAAGCTCTTTCT TTCACT AGAAGGAGCTTG TTGTCATTTACAGGA TERM 4023 2601563 - 2601586 + F 74 -7.5 -3.93216 | overlap 2601560 GCATAATTGGTGCAA GCTCTTTCT TTCACT AGAAGGAGC TTGTTGTCATTTACA desK 2601670 - 2602806 + | sensor histidine kinase desR 2602803 - 2603402 + | response regulator TERM 4024 2603434 - 2603410 - f 93 -5 -5.72254 | opp_overlap 2603394 2603410 TTAAATAAGAAAAAA GATCAGGACA CATGC TGCCTTGATC TTTTTTTCTATTAAA TERM 4025 2603410 - 2603434 + F 93 -5 -5.80817 | opp_overlap 2603410, overlap 2603394 TTAAATAAGAAAAAA GATCAGGACA CATGC TGCCTTGATC TTTTTTTCTATTAAA TERM 4026 2603551 - 2603529 - f 70 -8.6 -3.1544 | opp_overlap 2603530 TGATATGATATTCAA GTGATAATAA TTA TCATTATCAC TCATACAATCAAATA BPUM_2591 2603603 - 2604523 + | iron ABC transporter binding protein TERM 4027 2604555 - 2604525 - f 78 -6.9 -4.46112 | opp_overlap 2604530, overlap 2604530 TTTTAGGTAAATAAA CTAAAGCAAGGGA GCCCT TCCCTTGCTTTTT TCTTGTCTGCTTCTA TERM 4028 2604550 - 2604530 - f 88 -11.2 -4.27211 | opp_overlap 2604530, overlap 2604525 GGTAAATAAACTAAA GCAAGGGA GCCCT TCCCTTGC TTTTTTCTTGTCTGC TERM 4029 2604530 - 2604550 + F 100 -11.9 -5.60689 | opp_overlap 2604530 2604525 GGTAAATAAACTAAA GCAAGGGAG CCC TTCCCTTGC TTTTTTCTTGTCTGC TERM 4030 2604823 - 2604839 + G 77 -10.9 -2.74563 | GATGGTTTTCACTGG TGCCGAA TGA TTCGGCA TCATTCAAATGTACC TERM 4031 2605081 - 2605059 - g 90 -4.1 -5.64274 | TGATCTAGAAAAAAA CACCGTTAC AAATG ATCACGGTG AAGTGGAATTAACGA ytsA 2604547 - 2605323 + | response regulator TERM 4032 2605324 - 2605334 + G 70 -5.4 -4.56597 | opp_overlap 2605324 AAGGATGATCAATGA TGCT GCA AGCA TTTTTAAAGGAACGA TERM 4033 2605410 - 2605434 + G 84 -3.6 -5.53436 | gap 1, opp_overlap 2605417 TTTGTTGCTTTTTTG GATACGACCAT TCCA ATGG-CGTCTC TTTTTTATATTGTGT TERM 4034 2606227 - 2606214 - g 75 -2.3 -5.28481 | opp_overlap 2606215, overlap 2606215 2606222 TATTTAACGAAAAAA GGAGC AGAC GCTCT TCATATCAAGATCGA ytsB 2605323 - 2606327 + | sensor histidine kinase TERM 4035 2606314 - 2606350 + F 90 -11 -4.63486 | gap 1, overlap 2606316 2606317 ATGATTTTGTGCATA TTG-CGAGCATGTGACA ACAA TGTCACATGCTCGTCTG TTTTGTTCGCCAAAT TERM 4036 2606316 - 2606348 + F 100 -15.8 -3.93367 | gap 1, overlap 2606314 2606317 GATTTTGTGCATATT G-CGAGCATGTGACA ACAA TGTCACATGCTCGTC TGTTTTGTTCGCCAA TERM 4037 2606317 - 2606346 + F 100 -19.5 -3.55261 | overlap 2606316 2606314 ATTTTGTGCATATTG CGAGCATGTGACA ACAA TGTCACATGCTCG TCTGTTTTGTTCGCC ytsC 2606433 - 2607194 + | ABC transporter ATP-binding protein TERM 4038 2607268 - 2607279 + G 71 -2.2 -5.18371 | GCTCTCGTGTTTAGT GTGG CGCT CTAC TTTTCTTTTGTCACC TERM 4039 2608000 - 2607987 - g 91 -3.8 -5.80951 | opp_overlap 2607987 ACGTAAAAGAAAAAA TGGC TATCTC GCCA TTCATGAAGTCCTGT TERM 4040 2608183 - 2608153 - g 75 -9 -3.64685 | overlap 2608155 AAAACCGCTGAACAA CAGATCCCATCACA TTT CGTTATGGGATCAG AGAAAGAAGTCAATA TERM 4041 2608181 - 2608155 - g 78 -10.2 -3.39556 | overlap 2608153 AACCGCTGAACAACA GATCCCATCACA TTT CGTTATGGGATC AGAGAAAGAAGTCAA ytsD 2607184 - 2609121 + | ABC transporter ATP-binding protein TERM 4042 2609125 - 2609155 + T 89 -10.6 -4.59342 | gap 1, overlap 2609127 GAATCCTTGTAATCT C-ATCCCCATAGG CAGCTA CCTATGGGGATTG TTTGTTTATGATGGC TERM 4043 2609127 - 2609152 + T 100 -13.4 -4.39652 | overlap 2609125 ATCCTTGTAATCTCA TCCCCATAGG CAGCTA CCTATGGGGA TTGTTTGTTTATGAT BPUM_2596 2610513 - 2609161 - | hypothetical protein BPUM_2597 2611203 - 2610616 - | NAD(P)H dehydrogenase (quinone) TERM 4044 2610927 - 2610913 - G 70 -5.6 -4.25056 | overlap 2610918 CATGCGATCAATAAA GCCAAG CAG CATGGC TGGAGGTCTTCCCCA BPUM_2598 2611321 - 2611767 + | transcriptional regulator TERM 4045 2611782 - 2611762 - T 100 -15.5 -5.23016 | AAAGAACCTAAAAAA GCATGAGCG TAT CGCTCATGC AAAGGTTACTAAACT yisU 2612453 - 2611839 - | LysE family L-lysine exporter TERM 4046 2612569 - 2612545 - R 93 -7.2 -5.64274 | gap 1, opp_overlap 2612540 2612545 TGATCCATAAAAAAA GCGC-TGGATG CTTT CATCCAAACGC TTTTCGTTTATTCAT TERM 4047 2612545 - 2612569 + r 70 -5 -4.68846 | gap 1, opp_overlap 2612545, overlap 2612540 TGATCCATAAAAAAA GCG-CTGGATG CTTT CATCCAAACGC TTTTCGTTTATTCAT ytcI 2614164 - 2612584 - | bifunctional AMP-dependent acyl-coenzyme A synthetase/ligase TERM 4048 2614270 - 2614280 + r 70 -2.6 -5.17576 | GACCTACTCCTAGTA TTAT GCC ATAA TTTTTTCAATTCGTC TERM 4049 2614361 - 2614342 - R 100 -13.6 -5.35224 | TGTACAAAAAGAAAA GAGCGGGA ATGA TCCCGCTC CTAAGCCATAGCTTT sspA 2614602 - 2614390 - | small acid-soluble spore protein A thiI 2615897 - 2614692 - | thiamine biosynthesis protein TERM 4050 2618036 - 2618080 + G 71 -2.2 -5.13741 | gap 1 GATGCGACGGGAATG GTTGG-AGCAAATGAAGGAGG CAAA CTGCTTTCACTTTCTGCCAAC TTTTTATTCGGTTCC TERM 4051 2618113 - 2618123 + G 79 -6.8 -4.74539 | overlap 2618090 TGGTAACATTGTTCT TGGC GCA GCCA TTTTATTCGCTTGTT braB1 2617247 - 2618590 + | LIVCS family branched chain amino acid:cation symporter TERM 4052 2618607 - 2618633 + F 100 -10.9 -5.97979 | opp_overlap 2618607 CATTGCAAGCCAAAA CATCCCCTTCT CCATT GGAGGGGGATG TTTTTTTATTGTTCT TERM 4053 2618633 - 2618607 - f 82 -8.1 -4.2803 | gap 2, opp_overlap 2618607 CATTGCAAGCCAAAA CATCCCCTTCTCC ATT GGAG--GGGGATG TTTTTTTATTGTTCT braB2 2618805 - 2620148 + | LIVCS family branched chain amino acid:cation symporter TERM 4054 2620184 - 2620158 - T 100 -12.4 -5.47159 | opp_overlap 2620158 TCTTAACAGAAAAAA GCTGAAGTCC TGTAAAT GGACTTCAGC TTTTTTATTGATGCT TERM 4055 2620158 - 2620184 + T 100 -12.4 -5.52023 | opp_overlap 2620158 TCTTAACAGAAAAAA GCTGAAGTCC TGTAAAT GGACTTCAGC TTTTTTATTGATGCT ezrA 2621892 - 2620189 - | septation ring formation regulator EzrA hisK 2622233 - 2623048 + | histidinol-phosphatase yttP 2623683 - 2623018 - | transcriptional regulator ytsP 2623810 - 2624307 + | hypothetical protein TERM 4056 2624314 - 2624342 + F 89 -7.5 -5.06414 | opp_overlap 2624320, overlap 2624320 AATGCATAATCTTAC AAAAAAGCAGGCG CAT TGTCTGCTTTTTA TTTTTCTTCGCAGAC TERM 4057 2624320 - 2624336 + F 100 -6.5 -5.74684 | opp_overlap 2624320, overlap 2624314 TAATCTTACAAAAAA GCAGGCG CAT TGTCTGC TTTTTATTTTTCTTC TERM 4058 2624336 - 2624320 - f 76 -3.6 -5.27923 | opp_overlap 2624320 2624314 TAATCTTACAAAAAA GCAGGC GCATT GTCTGC TTTTTATTTTTCTTC rpsD 2624606 - 2625208 + | 30S ribosomal protein S4 TERM 4059 2625275 - 2625241 - f 100 -12.3 -5.60864 | gap 1, opp_overlap 2625241 GAGAGATCAAAAAAA CCCTAGATC-CCTTGA TTGT TCAAGGTGGTCTAGGG TTTTTTGTTTGCATT TERM 4060 2625241 - 2625275 + F 100 -14.5 -5.67283 | gap 1, opp_overlap 2625241 GAGAGATCAAAAAAA CCCTAGATC-CCTTGA TTGT TCAAGGTGGTCTAGGG TTTTTTGTTTGCATT BPUM_2611 2625361 - 2625969 + | hypothetical protein TERM 4061 2625965 - 2626006 + T 84 -11.8 -3.28204 | opp_overlap 2625974, overlap 2625974 ACACATCTGATTTGG CATAAAAAAGCTCCTAGA TATTTT TCTAGGAGCTTTTTAACG TTCAATTATGATTTT TERM 4062 2625997 - 2625974 - T 100 -11.1 -5.24531 | opp_overlap 2625965 2625974 ATTTGGCATAAAAAA GCTCCTAGA TATTTT TCTAGGAGC TTTTTAACGTTCAAT TERM 4063 2625974 - 2625997 + T 90 -11.1 -4.67234 | opp_overlap 2625974, overlap 2625965 ATTTGGCATAAAAAA GCTCCTAGA TATTTT TCTAGGAGC TTTTTAACGTTCAAT yrdC 2626575 - 2626012 - | amidohydrolase TERM 4064 2626779 - 2626761 - R 79 -4.5 -5.23316 | opp_overlap 2626755 2626763 GATGACATCAAAAAA GACAGCA CAAGT CGCTGCC TTTTTCATTTTTTAA lip 2627438 - 2626791 - | triacylglycerol lipase BPUM_2614 2627640 - 2627942 + | antibiotic biosynthesis monooxygenase TERM 4065 2628084 - 2628044 - T 100 -15.1 -5.19879 | gap 1, opp_overlap 2628049, overlap 2628049 TTCTAAATATAAAAA GAAAAGCACCTC-AATGT ATACGA ACATTTGAGGTGCTTTTC ATGATGCTTACTGTT TERM 4066 2628079 - 2628049 - T 100 -9.2 -5.40873 | gap 1, opp_overlap 2628049, overlap 2628044 AATATAAAAAGAAAA GCACCTC-AATGT ATACGA ACATTTGAGGTGC TTTTCATGATGCTTA TERM 4067 2628049 - 2628079 + T 85 -9.2 -4.33105 | gap 1, opp_overlap 2628049 2628044 AATATAAAAAGAAAA GCACCTC-AATGT ATACGA ACATTTGAGGTGC TTTTCATGATGCTTA tyrS 2629378 - 2628110 - | tyrosyl-tRNA synthetase TERM 4068 2628508 - 2628520 + g 80 -4.8 -5.1356 | CTTCACGTTTTTCAG GTGC TGTTT GCAC TTTTTCTTCGTACGA TERM 4069 2628654 - 2628672 + g 100 -8.8 -4.59853 | opp_overlap 2628653 2628656 TTTTCTTTATCTAAC CAGATGGC GCC GCCTTCTG TTTTTCCAAACTTCG TERM 4070 2629440 - 2629415 - R 100 -12.6 -5.48063 | opp_overlap 2629414, overlap 2629439 ATTCAACATAAAAAA CGCCCCTTCG AATGAA CGAAGGGACG ATATATATCGCGGTA acsA1 2631452 - 2629728 - | acetyl-CoA synthetase TERM 4071 2631043 - 2631031 - G 73 -9.1 -3.55444 | TCGCTATTTTCTAAA CGGTC TTT GACCG CACCTTCCATAAATG acuA 2631608 - 2632240 + | acetoin dehydrogenase AcuA TERM 4072 2632323 - 2632299 - g 73 -7.1 -4.22554 | overlap 2632300 2632303 TGATTGAACAAATAA TGGAGCGTGAT GTG ATCACGCTGCG AAAAACCGATACGAT TERM 4073 2632322 - 2632300 - g 77 -10.6 -3.12809 | overlap 2632299 2632303 GATTGAACAAATAAT GGAGCGTGAT GTG ATCACGCTGC GAAAAACCGATACGA TERM 4074 2632319 - 2632303 - g 77 -10.9 -2.75986 | overlap 2632300 2632299 TGAACAAATAATGGA GCGTGAT GTG ATCACGC TGCGAAAAACCGATA acuB 2632280 - 2632921 + | acetoin dehydrogenase AcuB TERM 4075 2633629 - 2633648 + G 75 -2.1 -5.40072 | opp_overlap 2633627, overlap 2633627 GAAGCATACCGAACA GCAGTGA CTGAAA TTGCTGC TTTTTTTAAACCAGA acuC 2632918 - 2634078 + | acetoin dehydrogenase AcuC TERM 4076 2634078 - 2634118 + T 84 -6.2 -5.28831 | gap 1, opp_overlap 2634079 2634084, overlap 2634084 AAAGAAAAAGGCATA AGAAAA-GCAGGCATTCAC TCAT GTGTAAGCCTGCTTTTTCG TTTTATTTTGTTGAT TERM 4077 2634116 - 2634079 - T 80 -9.9 -3.5867 | opp_overlap 2634078 2634084, overlap 2634084 AAGAAAAAGGCATAA GAAAAGCAGGCATTCAC TCAT GTGTAAGCCTGCTTTTT CGTTTTATTTTGTTG TERM 4078 2634084 - 2634111 + T 100 -9.8 -5.19819 | opp_overlap 2634084 2634079, overlap 2634078 AAAGGCATAAGAAAA GCAGGCATTCAC TCAT GTGTAAGCCTGC TTTTTCGTTTTATTT TERM 4079 2634111 - 2634084 - T 91 -9.8 -4.81863 | opp_overlap 2634078 2634084, overlap 2634079 AAAGGCATAAGAAAA GCAGGCATTCAC TCAT GTGTAAGCCTGC TTTTTCGTTTTATTT ccpA 2635122 - 2634121 - | PurR family transcriptional regulator TERM 4080 2634930 - 2634941 + g 90 -4.4 -5.63103 | CAGGGATGATGACGC CAAC CGTT GTTG TTTTTTTACTTGCAA TERM 4081 2635405 - 2635390 - RH 72 -2.4 -5.26918 | overlap 2635391 2635400 2635401 ATATTTCACAAAAAA CCGTCG AGAA CGTCAG CTATGACAATGATCT TERM 4082 2635559 - 2635538 - RH 93 -10.1 -4.9792 | opp_overlap 2635537 2635536 2635538 TACTCCATAGAAAAA CCGCCGG GCAGTCAT CCGGCGG CATTTTGATCTATGA TERM 4083 2635538 - 2635559 + rH 78 -10.8 -2.53329 | opp_overlap 2635538, overlap 2635537 2635536 TACTCCATAGAAAAA CCGCCGGG CAGTCA TCCGGCGG CATTTTGATCTATGA aroA 2636651 - 2635575 - | bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase BPUM_2622 2636641 - 2636805 + | hypothetical protein TERM 4084 2636845 - 2636862 + Tr 90 -11.3 -4.66535 | opp_overlap 2636845 TTTTTATAAAAAAAA CGTCAGC AATT GCTGACG TTTCTTTTACACATT TERM 4085 2636862 - 2636845 - TR 100 -11.3 -5.93809 | opp_overlap 2636845 TTTTTATAAAAAAAA CGTCAGC AATT GCTGACG TTTCTTTTACACATT ytxJ 2637192 - 2636869 - | hypothetical protein ytxH 2637696 - 2637226 - | hypothetical protein ytxG 2638142 - 2637723 - | hypothetical protein TERM 4086 2638333 - 2638351 + r 75 -3.1 -5.31519 | opp_overlap 2638333, overlap 2638341 ATTCAAAATAAAAAA GTGCC GATCAAAAA GGCAC TTTTTGTTTAAGTAT TERM 4087 2638351 - 2638333 - R 88 -3.1 -5.80951 | opp_overlap 2638333 2638341 ATTCAAAATAAAAAA GTGCC GATCAAAAA GGCAC TTTTTGTTTAAGTAT TERM 4088 2638341 - 2638357 + r 75 -8.1 -3.83324 | opp_overlap 2638333, overlap 2638333 TAAAAAAGTGCCGAT CAAAAAG GCA CTTTTTG TTTAAGTATTTATAC murC 2639665 - 2638367 - | UDP-N-acetylmuramate--L-alanine ligase ytpT 2642650 - 2639969 - | FtsK/SpoIIIE family cell division protein TERM 4089 2640230 - 2640244 + g 73 -5.6 -4.41548 | opp_overlap 2640230 CTGTTCGAAAAGGAA CACCGG CTT CCGCTG TTTTCTAACATGTGC TERM 4090 2642307 - 2642320 + g 70 -5.3 -4.56314 | opp_overlap 2642307 GCTTTCATTTGAACA GAAGA TAAT TCTTC TTTTGCTTCTGTTCG TERM 4091 2642864 - 2642841 - R 100 -12.6 -5.58454 | opp_overlap 2642841 TGTAGATGAAAAAAA GTCACTAAGT ACGT ACTTAGTGAC TTTTGGTATAACACA TERM 4092 2642841 - 2642864 + r 100 -12.6 -4.34402 | opp_overlap 2642841 TGTAGATGAAAAAAA GTCACTAAGT ACGT ACTTAGTGAC TTTTGGTATAACACA ytpR 2643517 - 2642912 - | PheRS aminoacylate phenylalanine transfer RNA TERM 4093 2643189 - 2643200 + g 81 -4.4 -5.36689 | overlap 2643186 ATGTTTAGTTTATCT GCAT TCGG ATGC TTTTCTTTTTCCTTT ytpQ 2644346 - 2643534 - | hypothetical protein TERM 4094 2643838 - 2643828 - G 71 -2.4 -5.10665 | ACGGAAGAAATAAAA CCGG TTG CCTG CCACTTCATCCATTT TERM 4095 2644272 - 2644284 + g 70 -7.7 -3.64915 | opp_overlap 2644272, overlap 2644278 TTTTTCTCGGTCAAA CTGGT GTG ACCAG TTGTCATTTGTCAGA ytpP 2644686 - 2644366 - | thioredoxin protein BPUM_2631 2645701 - 2644673 - | toxin regulator TERM 4096 2645667 - 2645685 + g 100 -11.8 -4.14739 | opp_overlap 2645671, overlap 2645671 AAGTACACTTTTGGC GAAAGGGA AAT TCCCTTTC TTTTCAAATAAGTCA TERM 4097 2645671 - 2645681 + g 79 -6.8 -4.67048 | opp_overlap 2645671, overlap 2645667 ACACTTTTGGCGAAA GGGA AAT TCCC TTTCTTTTCAAATAA ytoQ 2645902 - 2646348 + | hypothetical protein TERM 4098 2646354 - 2646378 + T 82 -10.8 -3.28745 | gap 1, opp_overlap 2646354, overlap 2646349 ACAGCAATAACAAAA GGCTGCTCTCT TAAA AGAG-GCAGCC TTAGATTGTTGACAA TERM 4099 2646378 - 2646354 - T 93 -10.8 -4.93661 | gap 1, opp_overlap 2646354 2646349 ACAGCAATAACAAAA GGCTGCTCTCT TAAA AGAG-GCAGCC TTAGATTGTTGACAA TERM 4100 2646389 - 2646427 + T 100 -21.4 -4.18506 | opp_overlap 2646395, overlap 2646395 CAGCCTTAGATTGTT GACAAAGGGCTAAAATGA TCT TTATTTTAGCCCTTTGTC TTCTTTTCAGCGTGA TERM 4101 2646395 - 2646421 + T 100 -13.2 -4.45253 | opp_overlap 2646395, overlap 2646389 TAGATTGTTGACAAA GGGCTAAAATGA TCT TTATTTTAGCCC TTTGTCTTCTTTTCA TERM 4102 2646421 - 2646395 - T 86 -11 -3.87373 | opp_overlap 2646389 2646395 TAGATTGTTGACAAA GGGCTAAAATGA TCT TTATTTTAGCCC TTTGTCTTCTTTTCA ytoP 2647635 - 2646562 - | glutamyl aminopeptidase TERM 4103 2647227 - 2647253 + g 78 -2.3 -5.58179 | gap 1 CACCAATATCAATGA GCATGTCTGATG GTTT CA-CAGATTTGC TTTTTTGTTCTGGTG ytzB 2647835 - 2648149 + | hypothetical protein TERM 4104 2648155 - 2648188 + T 100 -9 -5.38951 | gap 1, opp_overlap 2648158, overlap 2648158 TGTGGCTTGATAAAG AAAGCTTCGCAAAGG TGTAT CCTT-GCGAAGCTTC TTTTTTATATGGCTT TERM 4105 2648158 - 2648185 + T 91 -10.7 -4.77122 | gap 1, opp_overlap 2648158, overlap 2648155 GGCTTGATAAAGAAA GCTTCGCAAAGG TGTAT CCTT-GCGAAGC TTCTTTTTTATATGG TERM 4106 2648185 - 2648158 - T 100 -12.1 -4.55295 | opp_overlap 2648155 2648158 GGCTTGATAAAGAAA GCTTCGCAAAG GTGTAT CCTTGCGAAGC TTCTTTTTTATATGG malS 2649890 - 2648193 - | malate dehydrogenase ytnP 2650812 - 2649964 - | metal dependent hydrolase TERM 4107 2650140 - 2650150 + g 82 -6.8 -4.84359 | opp_overlap 2650140 CATCATAAGCAAGGA CCCA TAA TGGG TTTTTATGAGCGTGC TERM 4108 2650376 - 2650403 + g 78 -5.6 -4.8622 | TTAGGCGCCCTCATT TCATCCCATTCG ATTT TGGATGTGATGA TTTTTGCTTGCGGAA TERM 4109 2650887 - 2650913 + r 83 -10.9 -3.53066 | opp_overlap 2650887, overlap 2650883 2650881 CTTTTCACGAAAAAA GCTGACTGCAA TTTTT TTGCAGCCAGC TTGATGTTATTTGTT TERM 4110 2650913 - 2650887 - R 100 -13.1 -5.14563 | opp_overlap 2650883 2650881 2650887 CTTTTCACGAAAAAA GCTGACTGCAA TTTTT TTGCAGCCAGC TTGATGTTATTTGTT ytmQ 2651568 - 2650927 - | tRNA (guanine-N(7))-methyltransferase TERM 4111 2651683 - 2651659 - H 74 -5.7 -4.8048 | TGCGCATATGAAAAA GACCAACCC TTCGCCT GAGCTGGTC TTACGCATGTATAAA ytzH 2651757 - 2652032 + | hypothetical protein ytmP 2652841 - 2652029 - | choline kinase TERM 4112 2652893 - 2652917 + r 100 -11.5 -5.36181 | opp_overlap 2652892 2652891 2652893 2652895, overlap 2652914 TTAGTCGACAAAATT CAGCCGATTGA AGG TCAATAGGCTG TTTCTTTTTTTATTT TERM 4113 2652917 - 2652893 - R 80 -11.5 -2.53918 | opp_overlap 2652893 2652914, overlap 2652892 2652891 2652895 TTAGTCGACAAAATT CAGCCGATTGA AGG TCAATAGGCTG TTTCTTTTTTTATTT ytlR 2654044 - 2653115 - | sphingosine kinase ytlQ 2655028 - 2654093 - | hypothetical protein TERM 4114 2654818 - 2654833 + g 71 -4 -4.77047 | overlap 2654829 CGGCTTCTTTTTGCT TTCTCT TTAA GGAGAA TTTCTTTCTCTTTTC TERM 4115 2654896 - 2654914 + g 82 -3.1 -5.48825 | GGTCAAATGAATGCT GCGTC TTCTCTTTT GACGC TTTTTTTAACTCGTC ytlP 2655605 - 2655054 - | 2'-5' RNA ligase ytkP 2655700 - 2656629 + | cysteine synthase TERM 4116 2656661 - 2656634 - T 100 -12.8 -5.28683 | opp_overlap 2656634 ATCAAGATTAAAAAA GGAACAGGGG CAATGAAC CCCCTGTTCC TTTTTTCTTCGTTTT TERM 4117 2656634 - 2656661 + T 100 -12.8 -5.61689 | opp_overlap 2656634 ATCAAGATTAAAAAA GGAACAGGGG CAATGAAC CCCCTGTTCC TTTTTTCTTCGTTTT BPUM_2644 2657307 - 2656681 - | S51 peptidase TERM 4118 2657223 - 2657177 - G 73 -9 -3.48276 | gap 3, opp_overlap 2657177 2657178, overlap 2657178 GCTGCCTCCACATAA TGCGTGAC-TTCTTC-C-ACAGC ACTA GCTGTTGGGAAGAATGTCACGCG TTTTCCTTTTAACGA TERM 4119 2657177 - 2657223 + g 100 -12.6 -4.67038 | opp_overlap 2657177 2657178, overlap 2657178 GCTGCCTCCACATAA TGCGTGAC-TTCTTCCACAGCA CTAGC TGTTG-GGAAGAATGTCACGCG TTTTCCTTTTAACGA TERM 4120 2657222 - 2657178 - G 88 -12.5 -2.68823 | gap 3, opp_overlap 2657177 2657178, overlap 2657177 CTGCCTCCACATAAT GCGTGAC-TTCTTC-C-ACAGC ACTA GCTGTTGGGAAGAATGTCACGC GTTTTCCTTTTAACG TERM 4121 2657178 - 2657222 + g 100 -13.9 -3.395 | opp_overlap 2657178 2657177, overlap 2657177 CTGCCTCCACATAAT GCGTGAC-TTCTTCCACAGCA CTAGC TGTTG-GGAAGAATGTCACGC GTTTTCCTTTTAACG ytjP 2658740 - 2657331 - | dipeptidase PepV TERM 4122 2657513 - 2657524 + g 70 -5.8 -4.28111 | opp_overlap 2657512 TTGCAATCAGATGAG CTGG ATTT CCAG TTTGTTCCTCATATA TERM 4123 2658453 - 2658435 - G 73 -7.3 -4.07885 | opp_overlap 2658424 TATGTCTGCTGAAAA CGGCGGG GTTGT CCAGCCG TCACCAGCAGGTACA TERM 4124 2659223 - 2659235 + G 80 -4.7 -5.16151 | opp_overlap 2659213 2659211 2659223 AAATACGGCATTACA GCCGG AAT CGGGC TTTTTATTGCATTTA ytiP 2658827 - 2660125 + | NCS2 family nucleobase:cation symporter-2 TERM 4125 2660139 - 2660163 + F 70 -5 -4.62783 | AACAGAAACAAAACA GGCACATTCT AACAA GGGATGTGTC TTTTTGAGATCAGTG TERM 4126 2660584 - 2660563 - g 73 -7.3 -4.21607 | opp_overlap 2660563 TTCATTCAAGAGAAA GGTCTTGTG ACGA CACAAGAGC TGGTTGATGAATTCG ytzE 2660497 - 2660718 + | hypothetical protein TERM 4127 2660741 - 2660777 + T 100 -11.8 -5.42259 | gap 1, opp_overlap 2660749, overlap 2660744 2660749 ATGAACTGTCCATAT AACAAAAAGAACCGGCA AATA TGCCGGTTCTTTT-GTC TTTTTTTCAGCGTGA TERM 4128 2660744 - 2660775 + T 100 -14.6 -4.35085 | opp_overlap 2660749, overlap 2660741 2660749 AACTGTCCATATAAC AAAAAGAACCGGCA AATA TGCCGGTTCTTTTG TCTTTTTTTCAGCGT TERM 4129 2660749 - 2660770 + T 100 -14.5 -5.11475 | opp_overlap 2660749, overlap 2660744 2660741 TCCATATAACAAAAA GAACCGGCA AATA TGCCGGTTC TTTTGTCTTTTTTTC TERM 4130 2660770 - 2660749 - T 100 -14.5 -5.24796 | opp_overlap 2660749 2660744 2660741 TCCATATAACAAAAA GAACCGGCA AATA TGCCGGTTC TTTTGTCTTTTTTTC TERM 4131 2660871 - 2660901 + T 90 -8.4 -4.91357 | opp_overlap 2660876 2660879, overlap 2660876 GGTTTGTCTACACGC TAAAAGAACCGG CGATATA CCGGTTCTTTTC TTTTGTTCTATATTT TERM 4132 2660896 - 2660876 - T 79 -9 -4.16943 | opp_overlap 2660871 2660876, overlap 2660879 GTCTACACGCTAAAA GAACCGGC GATAT ACCGGTTC TTTTCTTTTGTTCTA TERM 4133 2660876 - 2660896 + T 100 -8.3 -5.31091 | opp_overlap 2660876 2660879, overlap 2660871 GTCTACACGCTAAAA GAACCGG CGATATA CCGGTTC TTTTCTTTTGTTCTA rsuA 2661631 - 2660915 - | pseudouridylate synthase ytgP 2663286 - 2661649 - | PST family polysaccharide transporter ytfP 2663447 - 2664718 + | flavoprotein TERM 4134 2664762 - 2664774 + G 70 -7.7 -3.70081 | AGTGGTGATTAGTTT GACAG CCG CTGTC TTCTTAAAATTGTCT BPUM_2651 2664715 - 2664912 + | hypothetical protein TERM 4135 2664945 - 2664968 + F 84 -6.1 -5.27938 | gap 1, opp_overlap 2664945 2664947 2664961, overlap 2664948 TGTTACGGTAAAGTA GAGGTCGAGT GAGAA ACTCGAC-TC TTTTTGTTTGAAAAT TERM 4136 2664948 - 2664966 + F 83 -8.9 -4.27026 | opp_overlap 2664947 2664945 2664961, overlap 2664945 TACGGTAAAGTAGAG GTCGAGT GAGAA ACTCGAC TCTTTTTGTTTGAAA opuD 2665053 - 2666585 + | BCCT family betaine transporter TERM 4137 2666636 - 2666587 - f 88 -11.1 -4.35405 | gap 1, opp_overlap 2666601, overlap 2666588 2666601 TAAAAAAAGCATAAA CGTGTAT-GAAAAAAGCCGTTC CTCATGT GAACGGCTTTTTTCTATACAAA CAATTTAAGATGGTC TERM 4138 2666635 - 2666588 - f 87 -12.4 -3.18803 | gap 1, opp_overlap 2666601, overlap 2666587 2666601 AAAAAAAGCATAAAC GTGTAT-GAAAAAAGCCGTTC CTCATGT GAACGGCTTTTTTCTATACAA ACAATTTAAGATGGT TERM 4139 2666601 - 2666621 + F 100 -8.3 -5.36441 | opp_overlap 2666588 2666587 2666601 ACGTGTATGAAAAAA GCCGTTC CTCATGT GAACGGC TTTTTTCTATACAAA TERM 4140 2666621 - 2666601 - f 91 -8.3 -5.14965 | opp_overlap 2666601, overlap 2666588 2666587 ACGTGTATGAAAAAA GCCGTTC CTCATGT GAACGGC TTTTTTCTATACAAA cbrC 2666688 - 2667236 + | hypothetical protein TERM 4141 2667246 - 2667264 + T 71 -3.1 -5.15634 | opp_overlap 2667243 2667238 2667246 AGTTAAACAAAATAA GGACC CTTCAAACA GGTCC TTTTTTGATACCATC TERM 4142 2667264 - 2667246 - T 70 -5.2 -4.5493 | opp_overlap 2667246, overlap 2667243 2667238 AGTTAAACAAAATAA GGACCCTT CAA ACAGGTCC TTTTTTGATACCATC yteV 2667470 - 2667279 - | hypothetical protein TERM 4143 2667405 - 2667422 + g 70 -3.5 -4.8083 | gap 1, opp_overlap 2667405 TTTTAAAAAAAGATT GATTTCGC TCT GC-AAATC TTTTTCGTGCTCTTC TERM 4144 2667555 - 2667531 - R 100 -10.1 -5.85737 | opp_overlap 2667531 2667531, overlap 2667532 ATATGAACAAAAAAA GCCTTTCATCT ATG AGATGAAAGGA CTTCTGTTTACAGCT TERM 4145 2667531 - 2667555 + r 74 -10.1 -2.88839 | opp_overlap 2667531 2667532, overlap 2667531 ATATGAACAAAAAAA GCCTTTCATCT ATG AGATGAAAGGA CTTCTGTTTACAGCT TERM 4146 2667531 - 2667556 + r 81 -9.9 -3.82603 | gap 1, opp_overlap 2667531 2667532, overlap 2667531 ATATGAACAAAAAAA G-CCTTTCATCT ATG AGATGAAAGGAC TTCTGTTTACAGCTT TERM 4147 2667554 - 2667532 - R 100 -13.6 -4.09002 | opp_overlap 2667531 2667531, overlap 2667531 TATGAACAAAAAAAG CCTTTCATCT ATG AGATGAAAGG ACTTCTGTTTACAGC ytwF 2667874 - 2667563 - | rhodanese protein yteU 2668612 - 2667929 - | integral membrane protein yteT 2669926 - 2668634 - | dehydrogenase TERM 4148 2668818 - 2668804 - G 76 -7.8 -4.13343 | ATAAATCCGTCAAAA GCAGAG GAT CTCCGC CGCCATGTCCCCCAG TERM 4149 2669298 - 2669320 + g 70 -3.5 -4.90266 | gap 1, overlap 2669304 TAATAATTCAGCGCC CCATAGGCAA ATAC TTGCTT-TGG TTTTTGATTGATCCA TERM 4150 2669770 - 2669759 - G 77 -3.6 -5.14563 | CTCTTCATGAAAAAA CGAG ACGC CCCG CAGTGATGGAAAACG yteS 2670468 - 2669944 - | hypothetical protein yteR 2671577 - 2670465 - | unsaturated glucuronyl hydrolase TERM 4151 2671074 - 2671097 + g 76 -9.7 -3.38361 | TCTCATGAGATACTC TTGGTGGAT CACCAT ATCCACCAA TTCCTCTTCACCTTT lplBA 2672561 - 2671596 - | ABC transporter ATP-binding protein TERM 4152 2673388 - 2673366 - g 90 -7.1 -5.24531 | gap 1 AGTGTCCAGAAAAAA GGAATCGCTG TCGC CAGC-ATTCC GAGCTGTACGATTGC TERM 4153 2673682 - 2673692 + G 76 -6.8 -4.5002 | opp_overlap 2673681 2673682 AAACGAAATCAATAG GGTG GAT CACC TTTATTATCTGTTTT ytdP 2672781 - 2675093 + | transcriptional regulator TERM 4154 2675102 - 2675124 + T 100 -12 -5.64421 | opp_overlap 2675102 CATATAAGACAAAAA GTCCCGCTCT CAG AAAGCGGGAC TTTTTTATTTAAACT TERM 4155 2675124 - 2675102 - T 100 -14.2 -5.1764 | opp_overlap 2675102 CATATAAGACAAAAA GTCCCGCTCT CAG AAAGCGGGAC TTTTTTATTTAAACT ytcD 2675533 - 2675129 - | transcriptional regulator TERM 4156 2675340 - 2675352 + g 79 -3.4 -5.40625 | TCAAGCTCTCTCAGC TGCT GTGTA AGCA TTTTTTGTGTGATGT TERM 4157 2675689 - 2675705 + G 75 -7.3 -4.34402 | CACCTTGCCCTTCTC GCACTAG CCA TTAGTGC TTTTGCTATAGGAAC BPUM_2663 2675656 - 2676861 + | major facilitator transporter TERM 4158 2676894 - 2676883 - g 71 -3 -5.06735 | TACAAAGTACAAAAA CATT AAAC AATG GAGTCCACATGCCAG TERM 4159 2677068 - 2677086 + G 75 -5.2 -4.85599 | opp_overlap 2677068 2677071, overlap 2677054 2677071 GGTCTTGCAGAAACA GGACTTCG TCG CGAAGATC TTTTTGTGACATCAA TERM 4160 2677553 - 2677542 - g 75 -5.8 -4.59773 | TGGGATGTGCAAAAA GGTG TCAT CACC ATTCCAAAATCAACG ytbE 2676858 - 2677697 + | aldo/keto reductase TERM 4161 2677694 - 2677742 + T 100 -14.9 -4.42237 | opp_overlap 2677704, overlap 2677704 AGACAACTTTGACTT TTAATGAAAACACCCCCGC TTTTTAACTGT GCGGGGGTGTTTTTATTGA TTATTTTGATTTCTT TERM 4162 2677732 - 2677704 - T 89 -10.3 -4.41494 | opp_overlap 2677694 2677704 GACTTTTAATGAAAA CACCCCCGC TTTTTAACTGT GCGGGGGTG TTTTTATTGATTATT TERM 4163 2677704 - 2677732 + T 100 -10.3 -5.23396 | opp_overlap 2677704, overlap 2677694 GACTTTTAATGAAAA CACCCCCGC TTTTTAACTGT GCGGGGGTG TTTTTATTGATTATT ytcQ 2679242 - 2677743 - | ABC transporter ATP-binding protein TERM 4164 2679077 - 2679065 - G 76 -7.7 -4.08692 | CAATCTCTTTTAAAA CCGAA TCT TTCGG CGGCTGCTGATGATA ytcP 2680146 - 2679268 - | ABC transporter ATP-binding protein ytbQ 2681097 - 2680348 - | hypothetical protein ytaP 2682076 - 2681147 - | hypothetical protein TERM 4165 2682174 - 2682144 - R 100 -12.7 -4.41348 | gap 1, opp_overlap 2682140 2682149, overlap 2682147 GTCCCGGGAAATAAA GAACACCCACCGGT TTAT ACCGATGGGTGT-C ATCATTAATTCGCAA TERM 4166 2682172 - 2682147 - R 100 -15.5 -4.32678 | opp_overlap 2682140 2682149, overlap 2682144 CCGGGAAATAAAGAA CACCCACCGGT TTAT ACCGATGGGTG TCATCATTAATTCGC TERM 4167 2682149 - 2682170 + r 74 -10.1 -2.8785 | opp_overlap 2682147 2682144, overlap 2682140 GGGAAATAAAGAACA CCCACCGGT TTAT ACCGATGGG TGTCATCATTAATTC leuS 2684728 - 2682179 - | leucyl-tRNA synthetase TERM 4168 2684678 - 2684705 + g 81 -4 -5.26875 | opp_overlap 2684679, overlap 2684679 TAAAATCAACAAAAA ACCCTCATCCCT GGAA AGGGACGAGAGA TTTTTTGGTTCCCGC TERM 4169 2684679 - 2684704 + g 70 -7.5 -3.75402 | opp_overlap 2684679, overlap 2684678 AAAATCAACAAAAAA CCCTCATCCCT GGAA AGGGACGAGAG ATTTTTTGGTTCCCG TERM 4170 2684704 - 2684679 - G 100 -11.9 -5.61689 | opp_overlap 2684679 2684678 AAAATCAACAAAAAA CCCTCATCCCT GGAA AGGGACGAGAG ATTTTTTGGTTCCCG ytvB 2685432 - 2685016 - | hypothetical protein TERM 4171 2685840 - 2685825 - g 86 -3.2 -5.66684 | GAACTCATAAAAAAA GCGC TAGATCAT GCGC GGATCGGTGTTGTCA ytvA1 2685771 - 2686574 + | hypothetical protein TERM 4172 2686581 - 2686565 - f 75 -8 -4.15833 | opp_overlap 2686565 ACCATTAGCTGAAAA CCCTGT GTAAA ACAGGG TTTTTTTAGTTAAAA TERM 4173 2686565 - 2686581 + F 100 -8 -5.63103 | opp_overlap 2686565 ACCATTAGCTGAAAA CCCTGT GTAAA ACAGGG TTTTTTTAGTTAAAA yttA 2686664 - 2687362 + | hypothetical protein TERM 4174 2687420 - 2687382 - T 100 -13.2 -5.52986 | opp_overlap 2687382 ATGTCACGAAAAAAA GAACCTCCTATCAGACCC ACC GGGTGTCTTAGGAGGTTC TTTTTTTAGATTTCT TERM 4175 2687382 - 2687420 + T 100 -13.2 -5.59564 | opp_overlap 2687382 ATGTCACGAAAAAAA GAACCTCCTATCAGACCC ACC GGGTGTCTTAGGAGGTTC TTTTTTTAGATTTCT ytrF 2688736 - 2687426 - | ABC transporter ATP-binding protein ytrE 2689424 - 2688726 - | ABC transporter ATP-binding protein ytrC 2690437 - 2689445 - | ABC transporter ATP-binding protein TERM 4176 2690234 - 2690220 - G 70 -2.8 -5.05153 | ATCGCAAAAAACAAA CCCATA GTC CATGAG AGGGCGATAAAAATA ytrB 2691327 - 2690431 - | ABC transporter ATP-binding protein ytrA 2691715 - 2691302 - | transcriptional regulator BPUM_2678 2691891 - 2691712 - | hypothetical protein TERM 4177 2692028 - 2692007 - R 100 -9.5 -6.04324 | opp_overlap 2692007 TCAAAAAATAAAAAA CAGACCCTT AAAA AAGGATCTG TTCATCATTCGTTGT ytzC 2692332 - 2692033 - | hypothetical protein BPUM_2680 2692461 - 2693426 + | hypothetical protein ytqB 2693423 - 2693998 + | rRNA methyltransferase TERM 4178 2694009 - 2693986 - T 100 -14 -5.47218 | opp_overlap 2693986 CGCTATTGAAAAAAA GCTCAAATCC TAAT GGATTTGAGC TTTTTTATGAGGATT TERM 4179 2693986 - 2694009 + T 100 -14 -5.25803 | opp_overlap 2693986 CGCTATTGAAAAAAA GCTCAAATCC TAAT GGATTTGAGC TTTTTTATGAGGATT ytpB 2695093 - 2694014 - | hypothetical protein ytpA 2695903 - 2695124 - | lysophospholipase ytoA 2695949 - 2696464 + | acetyltransferase TERM 4180 2696574 - 2696598 + T 100 -13 -4.88407 | opp_overlap 2696574 2696590 TATCATGACAAAAAA GGTTTTCAGC ACAAA GCTGAAAACC TTTTTCATTAACTAA TERM 4181 2696598 - 2696574 - T 100 -13 -5.32882 | opp_overlap 2696574, overlap 2696590 TATCATGACAAAAAA GGTTTTCAGC ACAAA GCTGAAAACC TTTTTCATTAACTAA asnB 2698504 - 2696606 - | asparagine synthase (glutamine-hydrolyzing) TERM 4182 2698138 - 2698127 - G 82 -5.8 -4.99134 | ATCCCAAATTAAAAA GGCA AACA TGCC GCGAAGCTTAGAAGC TERM 4183 2698613 - 2698652 + r 84 -11 -3.85864 | gap 1, opp_overlap 2698618 2698619 2698624, overlap 2698617 2698619 2698624 ATAATTTTTTTTAAT CAA-AAGGAAAACCGCTTA AAA TAAGCGGTTTTCTATGTTG TTATTGTCCTAATGC TERM 4184 2698617 - 2698647 + r 90 -12 -3.60967 | opp_overlap 2698618 2698619 2698624, overlap 2698613 2698619 2698624 TTTTTTTTAATCAAA AGGAAAACCGCTTA AAA TAAGCGGTTTTCTA TGTTGTTATTGTCCT TERM 4185 2698646 - 2698618 - R 100 -13.3 -4.4078 | opp_overlap 2698617 2698613 2698619 2698624, overlap 2698619 2698624 TTTTTTTAATCAAAA GGAAAACCGCTTA AAA TAAGCGGTTTTCT ATGTTGTTATTGTCC TERM 4186 2698619 - 2698645 + r 100 -16.8 -3.36862 | opp_overlap 2698618 2698619 2698624, overlap 2698617 2698613 2698624 TTTTTTAATCAAAAG GAAAACCGCTTA AAA TAAGCGGTTTTC TATGTTGTTATTGTC TERM 4187 2698645 - 2698619 - R 100 -16.8 -3.24146 | opp_overlap 2698619 2698617 2698613 2698624, overlap 2698618 2698624 TTTTTTAATCAAAAG GAAAACCGCTTA AAA TAAGCGGTTTTC TATGTTGTTATTGTC TERM 4188 2698624 - 2698640 + r 91 -10.9 -4.73633 | opp_overlap 2698619 2698618 2698624, overlap 2698619 2698617 2698613 TAATCAAAAGGAAAA CCGCTTA AAA TAAGCGG TTTTCTATGTTGTTA TERM 4189 2698640 - 2698624 - R 91 -10.9 -4.72729 | opp_overlap 2698624 2698619 2698617 2698613, overlap 2698619 2698618 TAATCAAAAGGAAAA CCGCTTA AAA TAAGCGG TTTTCTATGTTGTTA metK 2699855 - 2698653 - | S-adenosylmethionine synthetase TERM 4190 2700029 - 2700004 - H 100 -3.3 -6.20267 | gap 1 CCAAAAATAAAAAAA CCATTTCCTTCA TTG CGA-GGAAAGGG TCTGAGATCGCATGC pckA 2700412 - 2701998 + | phosphoenolpyruvate carboxykinase TERM 4191 2702033 - 2702012 - T 100 -10.9 -6.01187 | opp_overlap 2702012 AATCAAATAAAAAAA GCTGAGGAA TCAC TCCCTCAGC TTTTTTGTTAGTTTG TERM 4192 2702012 - 2702033 + T 100 -8.7 -5.59655 | opp_overlap 2702012 AATCAAATAAAAAAA GCTGAGGAA TCAC TCCCTCAGC TTTTTTGTTAGTTTG BPUM_2688 2702283 - 2702041 - | hypothetical protein ytmA 2703117 - 2702323 - | peptidase TERM 4193 2702696 - 2702706 + g 71 -6.8 -4.15396 | opp_overlap 2702677 2702676 2702696 2702695 CCCCATGTCACAAAG GAGG CCG CCTC TTGTTTCATTTCGAC TERM 4194 2703089 - 2703101 + g 71 -3.3 -5.02074 | ATCTGCGGATGGGGG GACGG AAA CCTTC TTTTTTCCACAATCA BPUM_2690 2704625 - 2703144 - | phytoene dehydrogenase TERM 4195 2704222 - 2704212 - G 73 -5.4 -4.72386 | CAAACGATTTAAAAA CTGA TCC TCAG CCTGTTCAAAAAGCA BPUM_2691 2705749 - 2704622 - | glycosyltransferase TERM 4196 2704917 - 2704895 - G 73 -3.5 -4.99043 | gap 1, overlap 2704897 GGTGTATAAACAAAA GACACTGCTT AACA AAGCAATG-C TTCGATTGACACCTG TERM 4197 2704916 - 2704897 - G 73 -7.2 -4.11748 | overlap 2704895 TGTATAAACAAAAGA CACTGCTT AACA AAGCAATG CTTCGATTGACACCT BPUM_2692 2706390 - 2705734 - | phospholipid/glycerol acyltransferase TERM 4198 2706069 - 2706056 - G 71 -2.4 -5.14563 | TGCCTCACTAAAAAA GAAG CCCCGC CTTC CAGTTCAAGCGGCCG TERM 4199 2706169 - 2706179 + g 75 -5.4 -4.8066 | opp_overlap 2706167 TGCTGTCATTAAAGC GTGT TTC ACAC TTTTTAAGTTCTCTT BPUM_2693 2707177 - 2706449 - | hypothetical protein BPUM_2694 2707351 - 2708352 + | ABC transporter ATP-binding protein ytlC 2708368 - 2709138 + | ABC transporter ATP-binding protein ytlD 2709125 - 2709919 + | ABC transporter ATP-binding protein TERM 4200 2709954 - 2709917 - T 100 -15.1 -4.56597 | opp_overlap 2709925, overlap 2709925 CGTTTTCTCCAAAAA TAAAGAAAGCACAGGGA GATC TCCCTGCGCTTTTTTTA ACGAATCAAACCGTT TERM 4201 2709946 - 2709925 - T 100 -12.3 -4.94811 | opp_overlap 2709925, overlap 2709917 CCAAAAATAAAGAAA GCACAGGGA GATC TCCCTGCGC TTTTTTTAACGAATC TERM 4202 2709925 - 2709946 + T 100 -10.1 -5.41143 | opp_overlap 2709925 2709917 CCAAAAATAAAGAAA GCACAGGGA GATC TCCCTGCGC TTTTTTTAACGAATC ytkD 2710428 - 2709952 - | MutT/NUDIX family phosphohydrolase BPUM_2698 2710677 - 2711330 + | stress protein BPUM_2699 2711353 - 2712144 + | hypothetical protein TERM 4203 2712174 - 2712142 - T 90 -11.5 -4.1585 | opp_overlap 2712147, overlap 2712147 TTACAACCGCGAAAA TAAAAGCATGTAGAA AAT CTCTACATGCTTTTT CAATTCATTAATCCA TERM 4204 2712169 - 2712147 - T 100 -11.4 -5.08255 | opp_overlap 2712147, overlap 2712142 ACCGCGAAAATAAAA GCATGTAGAA AAT CTCTACATGC TTTTTCAATTCATTA TERM 4205 2712147 - 2712169 + T 91 -10.7 -4.77896 | opp_overlap 2712147 2712142 ACCGCGAAAATAAAA GCATGTAGA AAATC TCTACATGC TTTTTCAATTCATTA BPUM_2700 2712482 - 2712174 - | hypothetical protein ytkC 2712930 - 2712526 - | hypothetical protein TERM 4206 2713047 - 2713018 - R 78 -5.7 -5.1471 | opp_overlap 2713018 2713042, overlap 2713042 ACGACAAAAAATAAA GGCGTCGTCTTTT AAAG AAAAAAAGCCGCC TTGTGCGGCGGCTTC TERM 4207 2713059 - 2713042 - R 100 -9.8 -5.95539 | opp_overlap 2713018 2713042, overlap 2713018 TTTTAAAGAAAAAAA GCCGCC TTGTGC GGCGGC TTCCATCTTTAGACT TERM 4208 2713042 - 2713059 + r 78 -9.8 -3.24289 | opp_overlap 2713018 2713042, overlap 2713018 TTTTAAAGAAAAAAA GCCGCC TTGTGC GGCGGC TTCCATCTTTAGACT BPUM_2702 2713259 - 2713068 - | hypothetical protein TERM 4209 2713371 - 2713341 - R 100 -14.2 -5.46657 | opp_overlap 2713345 GATTCCAACAAAAAA GGAATGTCGATC TCTTGAC GATCGACATTCC TTCCACATACGTATT dpsA 2713822 - 2713385 - | DNA-binding protein DpsA ytkA 2714543 - 2714109 - | hypothetical protein TERM 4210 2714627 - 2714646 + r 95 -12.2 -4.10331 | opp_overlap 2714627 TCGAATACAAAAAAA CCGGACAT CATG ATGTCCGG TTTATGATTGATTAA TERM 4211 2714646 - 2714627 - R 100 -12.2 -5.80817 | opp_overlap 2714627 TCGAATACAAAAAAA CCGGACAT CATG ATGTCCGG TTTATGATTGATTAA luxS 2715131 - 2714658 - | S-ribosylhomocysteinase ytjA 2715258 - 2715482 + | hypothetical protein ytiB 2716047 - 2715484 - | carbonate dehydratase TERM 4212 2716869 - 2716859 - g 93 -4 -5.85011 | GAAAAACTAAAAAAA GATT TGC AATC GCTAGATCAAGAGTT TERM 4213 2717056 - 2717072 + G 70 -5.2 -4.56597 | opp_overlap 2717054 2717056 AAAAGCTGAAAAGCA TCACAT TCAAT ATGTGA TTTTTGAAAACAACG BPUM_2708 2716262 - 2717251 + | ABC transporter ATP-binding protein TERM 4214 2717260 - 2717279 + T 100 -7.8 -5.21709 | opp_overlap 2717260 TGATTAATTGTTAAA CCCTGGGT GATG ATCCGGGG TTTTTTGCTGTAAAA TERM 4215 2717298 - 2717318 + T 86 -9.7 -4.32579 | opp_overlap 2717298 TTTGCTGTAAAAAAA GCACACCAT TGT AGGGTGTGC TTTATTGTAGGGTGT TERM 4216 2717318 - 2717298 - T 100 -9.7 -5.40072 | opp_overlap 2717298 TTTGCTGTAAAAAAA GCACACCAT TGT AGGGTGTGC TTTATTGTAGGGTGT rpmE1 2717587 - 2717345 - | 50S ribosomal protein L31 type B TERM 4217 2717522 - 2717532 + g 71 -8.2 -3.41569 | opp_overlap 2717522, overlap 2717520 CGATTTACTCAAAAA GCGG TAG CCGC TGTTTACGTCCATAA TERM 4218 2717532 - 2717522 - G 91 -8.2 -4.67353 | opp_overlap 2717520 2717522 CGATTTACTCAAAAA GCGG TAG CCGC TGTTTACGTCCATAA TERM 4219 2717626 - 2717614 - H 70 -6.3 -4.25104 | opp_overlap 2717613 2717614 CTTTCGTTATCAAAA CGTAA TCA TTACG CTTTATATTTATATT BPUM_2710 2717763 - 2719094 + | cytochrome bd ubiquinol oxidase, subunit I BPUM_2711 2719110 - 2720162 + | cytochrome bd quinol oxidase, subunit II BPUM_2712 2720231 - 2720389 + | hypothetical protein TERM 4220 2720462 - 2720477 + G 72 -6.1 -4.3898 | TGACGAAATTCATGA TGCGG ACGAAG CCGCA TTTTATCAGGCTGCT BPUM_2713 2720415 - 2720606 + | hypothetical protein TERM 4221 2720607 - 2720630 + T 100 -15.4 -5.4505 | opp_overlap 2720607 2720611, overlap 2720624 2720625 CTGGTAGAAGAGTAA GAAAGAGCGG ATCA CCGCTCTTTC TTTTTTGTTGAGACA TERM 4222 2720630 - 2720607 - T 100 -15.4 -3.41745 | opp_overlap 2720607 2720624 2720625, overlap 2720611 CTGGTAGAAGAGTAA GAAAGAGCGG ATCA CCGCTCTTTC TTTTTTGTTGAGACA TERM 4223 2720626 - 2720611 - T 87 -10.4 -4.34759 | opp_overlap 2720607 2720624 2720625, overlap 2720607 TAGAAGAGTAAGAAA GAGCGG ATCA CCGCTC TTTCTTTTTTGTTGA menC 2721837 - 2720713 - | o-succinylbenzoate-CoA synthase menE 2723284 - 2721824 - | O-succinylbenzoic acid--CoA ligase TERM 4224 2722501 - 2722485 - G 70 -7.9 -3.59315 | overlap 2722477 TGAAGCATCGCCAAA GGCGCAG GCC CTCCGCC TAATAAAAGACAGCG TERM 4225 2722695 - 2722683 - G 93 -9.1 -4.48902 | opp_overlap 2722683 ACAGACTTAAATAAA GCGGA TAA TCCGC TAATATGAAAAAGAG TERM 4226 2723339 - 2723305 - R 79 -8.8 -4.07568 | opp_overlap 2723310, overlap 2723310 CTCCTTTTCGTAAAA GAAAACAGCTTAGT CTGATGC ACTAAGCTGTTTTT CATCGGTATGATTGA TERM 4227 2723310 - 2723334 + r 88 -8.7 -4.76041 | opp_overlap 2723305 2723310 TTTCGTAAAAGAAAA CAGCTTAGT CTGATGC ACTAAGCTG TTTTTCATCGGTATG TERM 4228 2723334 - 2723310 - R 91 -8.7 -5.07652 | opp_overlap 2723310, overlap 2723305 TTTCGTAAAAGAAAA CAGCTTAGT CTGATGC ACTAAGCTG TTTTTCATCGGTATG menB 2724174 - 2723356 - | naphthoate synthase ytxM 2725013 - 2724189 - | hydrolase TERM 4229 2724246 - 2724232 - G 90 -5.7 -5.52986 | opp_overlap 2724239 ATTTTACCAAAAAAA TGTGG TTGTT CCACA TGAACTGTATGCCCA TERM 4230 2724448 - 2724468 + g 74 -6.7 -4.3255 | overlap 2724436 2724453 CGAGCTAGTCCAAGC GGGTTGGCT TTC AGCCTTCCC TTTCTTAGTTGAGCC menD 2726740 - 2724998 - | 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase menF 2728151 - 2726733 - | isochorismate synthase TERM 4231 2727818 - 2727803 - G 71 -3.2 -4.9448 | gap 1, opp_overlap 2727803 ATCCACCAAATAAAA GCGGACC AAC AG-CCGC TTGCCTTAACTCCTT menA 2728533 - 2729471 + | 1,4-dihydroxy-2-naphthoate octaprenyltransferase TERM 4232 2729479 - 2729499 + G 100 -9.7 -5.14563 | opp_overlap 2729479 TTGCTTAACAAAGAA CGCCTGC CCCAGCC GCAGGCG TTTTTTCATGAGGAA TERM 4233 2729499 - 2729479 - g 88 -9.7 -4.20367 | opp_overlap 2729479 TTGCTTAACAAAGAA CGCCTGC CCCAGCC GCAGGCG TTTTTTCATGAGGAA BPUM_2721 2729464 - 2729586 + | hypothetical protein dksA 2729595 - 2730326 + | DnaK suppressor protein BPUM_2723 2730412 - 2730888 + | hypothetical protein TERM 4234 2730894 - 2730912 + F 85 -7.4 -5.04249 | opp_overlap 2730894 GAACATGTAAAAAAA GACCGTTA TTA TGGCGGTC TTTCTTTTTTGGAGA TERM 4235 2730912 - 2730894 - f 81 -3.1 -5.52909 | opp_overlap 2730894 GAACATGTAAAAAAA GACCG TTATTATGG CGGTC TTTCTTTTTTGGAGA TERM 4236 2730957 - 2730938 - f 100 -7.2 -5.86976 | opp_overlap 2730938 GGAGAAAATAAAAAA GAGATCTT TGAC AAGACCTC TTTTAAAAATGACCC TERM 4237 2732455 - 2732475 + F 78 -9.7 -3.31263 | opp_overlap 2732428, overlap 2732457 ATTCGAACCCGCGAC CCCCACCTT GGC AAGGTGGTG TTCTACCACTGAACT TERM 4238 2732457 - 2732473 + F 82 -10.9 -3.22475 | opp_overlap 2732428, overlap 2732455 TCGAACCCGCGACCC CCACCTT GGC AAGGTGG TGTTCTACCACTGAA TERM 4239 2733375 - 2733400 + F 79 -10.5 -3.31322 | opp_overlap 2733376, overlap 2733376 2733378 CAAGAAGCACAAAAA AGATCAGTTCC AAAT GGAACTGATCC TTATACAAGCTTGGC TERM 4240 2733399 - 2733376 - f 100 -14 -5.4111 | opp_overlap 2733375 2733376 2733378 AAGAAGCACAAAAAA GATCAGTTCC AAAT GGAACTGATC CTTATACAAGCTTGG TERM 4241 2733376 - 2733399 + F 91 -14 -2.58579 | opp_overlap 2733376, overlap 2733375 2733378 AAGAAGCACAAAAAA GATCAGTTCC AAAT GGAACTGATC CTTATACAAGCTTGG TERM 4242 2733378 - 2733397 + F 78 -10.8 -2.83119 | opp_overlap 2733376, overlap 2733376 2733375 GAAGCACAAAAAAGA TCAGTTCC AAAT GGAACTGA TCCTTATACAAGCTT TERM 4243 2734684 - 2734697 + F 71 -4.5 -4.7254 | TTCGCCTTACGGCTT CGCAG AGAC CTGTG TTTTTGCTAAACAGT TERM 4244 2736222 - 2736241 + F 90 -12.2 -3.66803 | opp_overlap 2736221 2736220 GAGTGTCCTACAACC CCAAGAGG CAAG CCTCTTGG TTTGGGCTGTTCCCG TERM 4245 2737613 - 2737631 + F 74 -10.2 -2.75963 | overlap 2737612 AGTTTCCAATGACCC TCCCCGGT TGA GCCGGGGG CTTTCACATCAGACT TERM 4246 2737765 - 2737786 + F 81 -9.5 -3.97307 | gap 1 TTAGGTACCGTCAAG GTGCGAGCAG TTA CT-CTCGCAC TTGTTCTTCCCTAAC TERM 4247 2738083 - 2738098 + F 79 -10.4 -3.33315 | opp_overlap 2738072, overlap 2738073 ACTATCCGGTATTAG CTCCGG TTTC CCGGAG TTATCCCAGTCTTAC TERM 4248 2738159 - 2738172 + F 73 -8.1 -3.68988 | CCGCCGCTAACATCC GGGAG CAAG CTCCC TTCTGTTCGCTCGAC TERM 4249 2738337 - 2738356 + F 85 -5 -5.60993 | overlap 2738338 AGTGTTTGACTGACT ACCTATGA AACA TCATAGGA TTTTTTTATAAAAAC TERM 4250 2738338 - 2738355 + F 77 -8.5 -3.95873 | overlap 2738337 GTGTTTGACTGACTA CCTATGA AACA TCATAGG ATTTTTTTATAAAAA TERM 4251 2738422 - 2738440 + F 73 -6.6 -4.29106 | overlap 2738420 TCAAAGATCATCTTC GCCGTCTC TCA GAGGCGAC TTTATTAATATAACA TERM 4252 2738849 - 2738877 + F 79 -2.4 -5.60993 | CATCCTTACACGGTC TCTCCTTGCTCA ATTCA TGAAAAGGGAGA TTTTTTTATGCAGCA BPUM_2725 2738885 - 2739460 + | PTT family thiamin transporter TERM 4253 2739481 - 2739458 - f 76 -3.8 -5.24129 | opp_overlap 2739458 TTTCCTCACAAAAAA TAACTGGCTG ATTT CAGCTGGTTA TTTTTTTATGCATAA TERM 4254 2739458 - 2739481 + F 100 -8.2 -5.64274 | opp_overlap 2739458 TTTCCTCACAAAAAA TAACTGGCTG ATTT CAGCTGGTTA TTTTTTTATGCATAA BPUM_2726 2739553 - 2739741 + | hypothetical protein BPUM_2727 2740255 - 2739701 - | acetyltransferase BPUM_2728 2740424 - 2741059 + | hypothetical protein TERM 4255 2741513 - 2741525 + G 79 -3.3 -5.25656 | GTAAAGTCGTTTGCT GGACC GTT GTTCC TTTTTTACTCATTTT BPUM_2729 2741074 - 2742228 + | FtsW/RodA/SpoVE family cell division protein TERM 4256 2742733 - 2742750 + T 74 -6.3 -4.65916 | opp_overlap 2742725 TAAAACAGCCTGATT TAGGCAC AGCT GTGTCTA TTTTATTAAGCTGCG TERM 4257 2743361 - 2743393 + T 90 -8.5 -4.99312 | opp_overlap 2743346 2743364, overlap 2743362 2743364 TACTGGGCACATGCC AAATAGACACCTTCT GAT GGAAGGTGTCTATGA TTTTATTCTTCTATT TERM 4258 2743362 - 2743392 + T 90 -12 -3.57147 | opp_overlap 2743346 2743364, overlap 2743361 2743364 ACTGGGCACATGCCA AATAGACACCTTCT GAT GGAAGGTGTCTATG ATTTTATTCTTCTAT TERM 4259 2743390 - 2743364 - T 100 -13.9 -3.63627 | opp_overlap 2743362 2743361 2743364, overlap 2743346 TGGGCACATGCCAAA TAGACACCTTC TGATG GAAGGTGTCTA TGATTTTATTCTTCT TERM 4260 2743364 - 2743390 + T 100 -14.6 -3.33769 | opp_overlap 2743346 2743364, overlap 2743362 2743361 TGGGCACATGCCAAA TAGACACCTTCT GAT GGAAGGTGTCTA TGATTTTATTCTTCT TERM 4261 2743410 - 2743425 + T 90 -2.6 -5.87996 | gap 1 TTTATTCTTCTATTT GAGTATC AGC GAT-CTC TTTTTTTCTTGGTTG BPUM_2731 2744943 - 2743396 - | flotillin TERM 4262 2744262 - 2744276 + g 75 -5.7 -4.64952 | CTTTATCTGCTTCTG CACGT TTGAT ACGTG TTTCTTTATCTGCTT TERM 4263 2744495 - 2744553 + g 79 -6.9 -4.6313 | gap 2 TCTTCAACTGTCATT GACC-CTAAAATGGAGCGA-AGGTGTCCT TCT AGTACTTCTCTCGCTTCGTTTTCGCGGTC TTCTTTTGTTTTACC TERM 4264 2744585 - 2744575 - G 79 -6.8 -4.65895 | overlap 2744576 TGTTTTACCTAAAAA CTGC TCG GCAG CAGTAGCAATTTCTT yuaF 2745485 - 2744955 - | hypothetical protein yuaE 2745660 - 2746169 + | hypothetical protein TERM 4265 2746180 - 2746197 + T 91 -6.9 -5.37865 | opp_overlap 2746180 2746182, overlap 2746182 TATAAGACATAAAAA GACTCCC TTTT GGGAGGC TTTTTTCATTGTTAC TERM 4266 2746197 - 2746180 - T 85 -6.9 -5.12474 | opp_overlap 2746180 2746182, overlap 2746182 TATAAGACATAAAAA GACTCCC TTTT GGGAGGC TTTTTTCATTGTTAC TERM 4267 2746195 - 2746182 - T 79 -8.1 -4.16832 | opp_overlap 2746180 2746182, overlap 2746180 TAAGACATAAAAAGA CTCCC TTTT GGGAG GCTTTTTTCATTGTT gbsB 2747417 - 2746209 - | alcohol dehydrogenase gbsA 2748914 - 2747445 - | betaine-aldehyde dehydrogenase TERM 4268 2748295 - 2748312 + g 70 -7.7 -3.58522 | TCACCAACCGTTGCA CCTGGTC CAAG GACTAGG TTTGCCACTCCTGAT TERM 4269 2748970 - 2748999 + H 74 -5.2 -4.96848 | ATAAAAATTTAACGT TTTGAACATAAT TAACGT ATCATGTTCAAA TTTTTCTGTCAAAGG yuaC 2749122 - 2749679 + | transcriptional regulator TERM 4270 2749835 - 2749858 + T 100 -10.4 -5.82281 | opp_overlap 2749835 2749834 CTCCATAACGAAAAG CCATTCTTGA GAAT TCAAGGATGG TTTTTTTATGTATTT TERM 4271 2749858 - 2749835 - T 70 -8.2 -3.2891 | opp_overlap 2749835, overlap 2749834 CTCCATAACGAAAAG CCATTCTTGA GAAT TCAAGGATGG TTTTTTTATGTATTT BPUM_2737 2750067 - 2749879 - | hypothetical protein TERM 4272 2750049 - 2750059 + g 81 -5.4 -5.1166 | ACAGTATGATGACTT GGAA CAG TTCC TTTTTCATTTTACTC BPUM_2738 2751006 - 2750182 - | M15C subfamily peptidase TERM 4273 2751062 - 2751047 - R 90 -6.8 -5.63374 | opp_overlap 2751052 TGAATATTAAAAAAA GCCCCT GCTA AGGGAC TTAGAAATTTGTATT BPUM_2739 2752133 - 2751063 - | acyltransferase xhlB 2752459 - 2752196 - | holin XhlB TERM 4274 2752443 - 2752417 - G 90 -7.3 -5.08601 | opp_overlap 2752419 2752420, overlap 2752420 TGAGTGCAATAAAAA GAAGCACTGTG CGAAT CACAGTGCCTT TGTCGAATGTTTTCA TERM 4275 2752419 - 2752441 + g 74 -7.7 -3.94276 | opp_overlap 2752417 2752420, overlap 2752420 AGTGCAATAAAAAGA AGCACTGTG CGAAT CACAGTGCC TTTGTCGAATGTTTT TERM 4276 2752420 - 2752440 + g 79 -11.2 -2.95481 | opp_overlap 2752417 2752420, overlap 2752419 GTGCAATAAAAAGAA GCACTGTG CGAAT CACAGTGC CTTTGTCGAATGTTT TERM 4277 2752440 - 2752420 - G 100 -11.2 -4.63592 | opp_overlap 2752420 2752419, overlap 2752417 GTGCAATAAAAAGAA GCACTGTG CGAAT CACAGTGC CTTTGTCGAATGTTT bhlA 2752683 - 2752471 - | holin BhlA BPUM_2742 2753903 - 2752818 - | hypothetical protein BPUM_2743 2754156 - 2754046 - | hypothetical protein BPUM_2744 2754252 - 2754157 - | hypothetical protein BPUM_2745 2755534 - 2754320 - | hypothetical protein BPUM_2746 2756047 - 2755874 - | hypothetical protein BPUM_2747 2756373 - 2756044 - | hypothetical protein BPUM_2748 2757261 - 2756383 - | hypothetical protein BPUM_2749 2757659 - 2757276 - | hypothetical protein TERM 4278 2757309 - 2757320 + g 78 -2.2 -5.4433 | CTCAAAAACAAATTC GATG TCGC CGTC TTTTTGTTTGTCTGT xkdU 2758594 - 2757671 - | hypothetical protein TERM 4279 2758096 - 2758074 - G 100 -9.8 -5.11613 | opp_overlap 2758091 2758093 ATATGATCGAAAAAA CCCACTCTGC TTC GCAGTGTGAG CCTCACGTGATGTTC TERM 4280 2758093 - 2758112 + g 84 -2.8 -5.58454 | opp_overlap 2758074, overlap 2758091 CTCTGCTTCGCAGTG TGAGCCTC ACGT GATGTTCA TTTTTTTCATGTACA xkdT 2759627 - 2758578 - | bacteriophage baseplate assembly protein J TERM 4281 2759338 - 2759328 - G 87 -4.6 -5.4505 | GTCTTCAATAAAAAA CCGG GAG CCAG CTGGGATGTTGATAT xkdS 2760042 - 2759620 - | hypothetical protein xkdR 2760323 - 2760057 - | hypothetical protein yqbQ 2761330 - 2760320 - | hypothetical protein TERM 4282 2761193 - 2761165 - G 73 -5.2 -4.65895 | opp_overlap 2761165 2761168, overlap 2761168 CTTTCCATTTAAAAA GAACCGTGTCCC CTTCT GAGACACGGTAA TATGTTTGACTGCCT TERM 4283 2761190 - 2761168 - G 100 -11.3 -4.44608 | opp_overlap 2761165 2761168, overlap 2761165 TCCATTTAAAAAGAA CCGTGTCCC CTTCT GAGACACGG TAATATGTTTGACTG xkdP 2762010 - 2761342 - | hypothetical protein xkdO 2766136 - 2762003 - | hypothetical protein xkdN2 2766292 - 2766137 - | hypothetical protein xkdN1 2766756 - 2766316 - | hypothetical protein TERM 4284 2766637 - 2766651 + g 73 -2.8 -5.24129 | opp_overlap 2766638, overlap 2766638 GGCTTTAAAAACAAA AGGAAT GAC ATTCCC TTTTTTATCAACAAA TERM 4285 2766650 - 2766638 - G 89 -6.3 -5.26119 | opp_overlap 2766638 2766637 GCTTTAAAAACAAAA GGAAT GAC ATTCC CTTTTTTATCAACAA TERM 4286 2766820 - 2766799 - H 91 -9.5 -5.15969 | opp_overlap 2766776 2766799 TTTGAATGCAAAAAA GCACATCCA TTTT TGAATGTGC TTTCCAATCTTTTCA TERM 4287 2766799 - 2766820 + H 70 -7.3 -3.71687 | opp_overlap 2766799, overlap 2766776 TTTGAATGCAAAAAA GCACATCCA TTTT TGAATGTGC TTTCCAATCTTTTCA BPUM_2759 2766915 - 2766998 + | hypothetical protein TERM 4288 2767036 - 2766996 - T 100 -8.4 -5.4492 | opp_overlap 2766998 TATATAGACAAAAAA TAGACTCCCCCTTGAGCT TTGGT AGGTAAAAGGGAAGTCTA TCCTAAAGTATCCTA TERM 4289 2767090 - 2767113 + T 91 -11 -4.82111 | GCCGAATTGTACATT GCCGGGATGT TGAC GCATCCTGGC TTCTTTTTATTTTAT xkdM 2767727 - 2767284 - | hypothetical protein TERM 4290 2767631 - 2767645 + g 82 -8.6 -4.25104 | ATTTATTTTTCTCCA CGTTTG CTT CAAACG TTTTGATAAAGGCAA xkdK 2769075 - 2767729 - | hypothetical protein BPUM_2762 2769291 - 2769079 - | hypothetical protein TERM 4291 2769263 - 2769273 + g 82 -4.6 -5.28683 | overlap 2769250 TCGCCAGCTACTTGA GCGG GCT CTGC TTTTTTAGTCTTGCT yqbJ 2769733 - 2769278 - | hypothetical protein TERM 4292 2769519 - 2769529 + g 74 -4.6 -4.88067 | overlap 2769518 ACAATGATTTCTACC GCGT TAT GCGC TTTTTCTGAATCCAT yqbI 2770235 - 2769738 - | hypothetical protein yqbH 2770588 - 2770232 - | hypothetical protein yqbG 2770968 - 2770585 - | hypothetical protein xkdG 2771905 - 2770982 - | hypothetical protein yqbD 2773016 - 2771928 - | hypothetical protein yqbA 2774512 - 2773055 - | capsid portal protein yqaT 2775822 - 2774509 - | terminase large subunit TERM 4293 2775238 - 2775261 + g 80 -3.8 -5.37043 | GGAGTGATGATAGTA CGTATCTTTG ATCA CAACGGTGCG TTTTTTGTATAAGGT yqaS 2776463 - 2775819 - | terminase small subunit TERM 4294 2776114 - 2776131 + g 79 -6.9 -4.6856 | opp_overlap 2776114 GTTTCTTCTAATGAA GGAGGCA TGTA TGCCGCC TTTTTCAGCTCTTTG TERM 4295 2776639 - 2776613 - R 100 -8.8 -5.79595 | opp_overlap 2776613 TTGTAAAAGAAAAAA CGCCTATTCA GCTGCTT CGAATAGGCG TTCTTGTACTTTTTT TERM 4296 2776613 - 2776639 + r 77 -8.1 -4.00262 | opp_overlap 2776613 TTGTAAAAGAAAAAA CGCCTATTC AGCTGCTTC GAATAGGCG TTCTTGTACTTTTTT xpf 2777134 - 2776616 - | positive control sigma-like factor TERM 4297 2777213 - 2777169 - R 100 -10.9 -5.92399 | gap 1, opp_overlap 2777184 TAAGAAAATAAAAAA CGGACACCAATCAA-TCCCT TTTCAT AGGGTCTTGATCAGTGTCCG CAGGCTTTCCGTCTT yqaO 2777466 - 2777260 - | hypothetical protein yqaN 2777865 - 2777479 - | hypothetical protein TERM 4298 2777898 - 2777912 + r 70 -2.8 -5.16151 | TCCTTTTCCCACTGA CGGATA TCT TGTTCG TTTTTATTCGCTTTG BPUM_2775 2778158 - 2777916 - | hypothetical protein BPUM_2776 2778548 - 2778285 - | hypothetical protein xre 2778707 - 2779084 + | transcriptional regulator TERM 4299 2779111 - 2779127 + F 100 -9.4 -5.65177 | ATAAAGCTTGACATT GCTGGG ATGCA CCCAGC TTTTTTTATGCCTCT BPUM_2778 2779282 - 2779632 + | hypothetical protein TERM 4300 2779649 - 2779688 + F 95 -13.2 -2.95068 | opp_overlap 2779657, overlap 2779657 CTACATGACTTTACA TATAAAAAGGCGATGA CTTCATGA TCATCGCCTTTTTGTA TGTCTACGTGTATTG TERM 4301 2779657 - 2779680 + F 91 -8.2 -5.07275 | opp_overlap 2779657, overlap 2779649 CTTTACATATAAAAA GGCGATGA CTTCATGA TCATCGCC TTTTTGTATGTCTAC TERM 4302 2779680 - 2779657 - f 91 -8.9 -5.03994 | opp_overlap 2779657 2779649 CTTTACATATAAAAA GGCGATGAC TTCATG ATCATCGCC TTTTTGTATGTCTAC bioB 2779837 - 2780832 + | biotin synthase TERM 4303 2780837 - 2780858 + T 100 -12.3 -4.56597 | opp_overlap 2780837 GTGCATTATAAAAAA GTCTGCCGG TGAA TCGGCAGAC TTTTTGACAAGACAA TERM 4304 2780858 - 2780837 - T 100 -11.6 -5.31275 | opp_overlap 2780837 GTGCATTATAAAAAA GTCTGCCG GTGAAT CGGCAGAC TTTTTGACAAGACAA BPUM_2780 2781347 - 2780874 - | hypothetical protein TERM 4305 2781508 - 2781489 - R 100 -9.4 -5.72254 | TGAAACAACAAAAAA CTACTCTT TAAT AAGAGTAG TCAGACCGTAGACAA TERM 4306 2781515 - 2781561 + r 93 -4.7 -5.75342 | gap 2, opp_overlap 2781525, overlap 2781525 TAAGAGTAGTCAGAC CGTAGACAAACCCTACCTTTACT TCA AGTAAAAGTGGGGTTT-TC-ACA TTTTTTTTGAAAAAC TERM 4307 2781525 - 2781553 + r 88 -11.1 -4.35095 | opp_overlap 2781525, overlap 2781515 CAGACCGTAGACAAA CCCTACCTTTACT TCA AGTAAAAGTGGGG TTTTCACATTTTTTT TERM 4308 2781553 - 2781525 - R 86 -11.1 -4.05747 | opp_overlap 2781525 2781515 CAGACCGTAGACAAA CCCTACCTTTACT TCA AGTAAAAGTGGGG TTTTCACATTTTTTT TERM 4309 2781592 - 2781617 + r 100 -13.4 -3.98747 | ATCATGTGTTTTACG CTGGACATGG TACTTT CCATGTCCAG TTTGCTAGTTTTTTA TERM 4310 2781703 - 2781713 + r 78 -5.4 -5.10933 | GAAGTTTCGTCCAAC GCAT ACC ATGC TTTTCTTTTGCATCC TERM 4311 2781978 - 2781961 - R 81 -9.9 -3.73859 | TACGATAAGAGAGAA TTTGCCC GTTG GGGCAAA TGTAACAATCAAAAT TERM 4312 2782311 - 2782335 + r 91 -9.3 -5.02645 | overlap 2782315 ACATAATAGCCACTC TCTGGGTCAGT TGT ACTGACCTTGA TTTCTTTTGTTTCTT TERM 4313 2782315 - 2782331 + r 84 -10.9 -3.85719 | overlap 2782311 AATAGCCACTCTCTG GGTCAGT TGT ACTGACC TTGATTTCTTTTGTT TERM 4314 2782522 - 2782535 + r 75 -3.1 -5.18357 | gap 1, overlap 2782522 ATGAAGGCGATAGAC GGG-TC AAC GAGCCC TTTTTTCATCGCTTC TERM 4315 2783012 - 2782990 - R 100 -15 -5.39721 | opp_overlap 2782986, overlap 2783011 TTATTATACAAAAAA GCTTGTAGAC TTT GTCTACAAGC TGACTACTCTTTAAT TERM 4316 2783016 - 2783035 + r 78 -9.4 -3.6707 | opp_overlap 2783011 TTGTCTACAAGCTGA CTACTCTT TAAT AAGAGTAG TTTCCAGTATTACAT uppP 2783923 - 2783045 - | undecaprenyl pyrophosphate phosphatase TERM 4317 2783966 - 2783939 - R 79 -8.5 -4.04206 | opp_overlap 2783932 2783939 CTATGTCCACATAAA GACAAGCTTCC TTCATC GAAAGCTCGTC TTTATGATACTATAT yubA 2785148 - 2784006 - | hypothetical protein BPUM_2784 2785606 - 2785214 - | hypothetical protein TERM 4318 2786161 - 2786144 - g 90 -4.2 -5.58454 | GCTACAGCAAAAAAA CATCAA GTGTGT TTGATG GAAGCGATGAAAACG BPUM_2785 2785808 - 2786791 + | dehydrogenase TERM 4319 2786817 - 2786851 + T 100 -17.3 -6.09196 | opp_overlap 2786817 2786821 GTATGAAATGATGAA CAAAGGGCGAACGTG ATGTG CAAGTTCGCCCTTTG TTTTTTTATTTTGAG TERM 4320 2786851 - 2786817 - T 100 -17.3 -3.34227 | opp_overlap 2786817, overlap 2786821 GTATGAAATGATGAA CAAAGGGCGAACGTG ATGTG CAAGTTCGCCCTTTG TTTTTTTATTTTGAG TERM 4321 2786847 - 2786821 - T 95 -12.3 -4.30833 | opp_overlap 2786817, overlap 2786817 GAAATGATGAACAAA GGGCGAACGTG ATGTG CAAGTTCGCCC TTTGTTTTTTTATTT BPUM_2786 2787399 - 2786875 - | C56 family peptidase TERM 4322 2787483 - 2787460 - R 100 -11 -5.26119 | opp_overlap 2787455 2787460 TGCTTAAAAAGAAAA GCGGTTCCCC TTGA GGAGAACCAC TTGATCTTATTCGTT BPUM_2787 2789478 - 2787490 - | sensor histidine kinase TERM 4323 2789606 - 2789631 + r 70 -9 -3.16154 | opp_overlap 2789607, overlap 2789609 TATTGAATGGAAAAA ACACCTGACG CCAAAA CGTCAGGTGC TTCCCTATACTCTTA TERM 4324 2789630 - 2789607 - R 100 -13.2 -5.16572 | opp_overlap 2789606 2789609 ATTGAATGGAAAAAA CACCTGACGC CAAA ACGTCAGGTG CTTCCCTATACTCTT TERM 4325 2789609 - 2789628 + r 72 -9.3 -2.77658 | opp_overlap 2789607, overlap 2789606 TGAATGGAAAAAACA CCTGACG CCAAAA CGTCAGG TGCTTCCCTATACTC BPUM_2788 2791620 - 2789644 - | sensor histidine kinase TERM 4326 2789777 - 2789796 + g 93 -10.8 -4.14598 | TCTTGGAAGCCTGCG GAGCTTTC TCGT GAAAGCTC TTTGATTTGATTCAC TERM 4327 2790761 - 2790735 - G 73 -3.8 -4.96427 | gap 1, overlap 2790737 TAATAATAAAATAAA TCGCGATT-CC GCCTAT GGCAATCGCAA CTGCCAGTATGATCA TERM 4328 2791042 - 2791056 + g 73 -5.7 -4.50583 | TTCTTTACCAATCTT GATGC TGTTT GCATC TTTTATGATCGTGTT TERM 4329 2791791 - 2791755 - R 87 -11.9 -3.07816 | gap 1, opp_overlap 2791763, overlap 2791763 TTTTGATTTACTCAA TGGAAAAAGAGCCCTT TAGCTG AAGGGCTCTTTTT-CA TTCTGTCTATTCGAC TERM 4330 2791763 - 2791784 + r 93 -10.9 -4.9755 | opp_overlap 2791755 2791763 TACTCAATGGAAAAA GAGCCCTTT AGCT GAAGGGCTC TTTTTCATTCTGTCT TERM 4331 2791784 - 2791763 - R 91 -10.2 -4.75174 | opp_overlap 2791763, overlap 2791755 TACTCAATGGAAAAA GAGCCCTT TAGCTG AAGGGCTC TTTTTCATTCTGTCT BPUM_2789 2793789 - 2791798 - | sensor histidine kinase TERM 4332 2793700 - 2793682 - G 100 -8.2 -5.08824 | opp_overlap 2793681 CTTTGATGTAAAAAA TGCACTAA TTG TCAGTGCA GTGGTTGGCAGGATA TERM 4333 2793880 - 2793899 + r 100 -10.8 -5.25656 | opp_overlap 2793880 TAAACATAAAAAAAA TACCCAGA CAAT TCTGGGTA TTTTTTCATCATTTT TERM 4334 2793899 - 2793880 - R 100 -10.8 -6.15717 | opp_overlap 2793880 TAAACATAAAAAAAA TACCCAGA CAAT TCTGGGTA TTTTTTCATCATTTT BPUM_2790 2795906 - 2793915 - | sensor histidine kinase TERM 4335 2795141 - 2795159 + g 82 -10.4 -3.70568 | opp_overlap 2795134 TTAAATCATTTGTCA CAAAAACG AGA CGTTTTTG TTCTCCTTTATTCTC BPUM_2791 2796033 - 2795932 - | hypothetical protein TERM 4336 2795974 - 2795992 + g 76 -6.8 -4.41616 | opp_overlap 2795974 TTCATGTTTTTCAAA TAAAAAGG ATG CCTTTTTG TTTATTTCCACAAAT tgl 2796063 - 2796803 + | transglutaminase TERM 4337 2796838 - 2796809 - T 85 -5.8 -5.47218 | gap 1, opp_overlap 2796809 TGGCAGCTAAAAAAA GCCTCTTGTC-TA GTGGT TATGACAAGGGGC TTTTGTATGCCTTGC TERM 4338 2796809 - 2796838 + T 86 -8.7 -4.57474 | gap 1, opp_overlap 2796809 TGGCAGCTAAAAAAA GCCTCTTGTC-TAG TGG TTATGACAAGGGGC TTTTGTATGCCTTGC BPUM_2793 2797073 - 2796825 - | hypothetical protein BPUM_2794 2798129 - 2797098 - | 2-nitropropane dioxygenase TERM 4339 2797204 - 2797214 + g 71 -6.8 -4.21098 | overlap 2797201 2797199 TCAGGATTTCCCGCC GCAG CGG CTGC TTTTCGCATTGGTGT BPUM_2795 2798547 - 2798146 - | hypothetical protein TERM 4340 2798677 - 2798658 - R 90 -6.4 -5.65513 | opp_overlap 2798658 TACCAAGTAAAAAAA CCTCGTCA AGAG TTACGAGG TTTTTAGGAAAAGTG TERM 4341 2798658 - 2798677 + r 77 -6.4 -4.57073 | opp_overlap 2798658 TACCAAGTAAAAAAA CCTCGTCA AGAG TTACGAGG TTTTTAGGAAAAGTG BPUM_2796 2799973 - 2798681 - | HCC family HlyC/CorC transporter TERM 4342 2799935 - 2799923 - G 100 -7.7 -5.56673 | overlap 2799909 AGTGACAACAAAAAA TGCTG TCG CAGCA ATGAGTAATATGACT TERM 4343 2800001 - 2799979 - R 100 -9.2 -5.82281 | overlap 2799994 AAATATACAAAAAAA CCCTTACC TAACAAC GGTAAGGG CTCACCTCCTCTGGC BPUM_2797 2800699 - 2800022 - | hypothetical protein BPUM_2798 2801002 - 2800778 - | hypothetical protein TERM 4344 2800907 - 2800893 - G 70 -3.6 -4.7497 | overlap 2800897 TGCAGCCATGAAAAA TCATTC ATA AAATGA TTCACCGCATTTAAG TERM 4345 2801534 - 2801504 - g 70 -5.4 -4.54301 | opp_overlap 2801513 2801532, overlap 2801506 GAAAAAACGAACAAA CTGCTTCAATCGTT TCA AACGATTGATCCCG CTATGCCGATTGTGC TERM 4346 2802060 - 2802038 - g 100 -7 -6.02914 | GGTATACAAAAAAAA GAAGGACCCA TGT TGAATCCTCC CTTTGATTATGAGCT BPUM_2799 2801120 - 2802106 + | VIC family voltage gated ion channel yugN 2802504 - 2802103 - | hypothetical protein BPUM_2801 2802755 - 2802537 - | hypothetical protein TERM 4347 2802826 - 2802864 + r 72 -7.5 -3.71353 | opp_overlap 2802833, overlap 2802829 2802830 2802833 GGAACCGTGAGAAAA TAAAAAAGGCACACCTT TTAAC AAGGTGTGCCTCAATTA TTCTTACGATTGTTT TERM 4348 2802857 - 2802833 - R 100 -14.4 -5.86976 | opp_overlap 2802833 2802830 2802829 2802826 TGAGAAAATAAAAAA GGCACACCTT TTAAC AAGGTGTGCC TCAATTATTCTTACG TERM 4349 2802833 - 2802857 + r 95 -14.4 -2.71503 | opp_overlap 2802833, overlap 2802830 2802829 2802826 TGAGAAAATAAAAAA GGCACACCTT TTAAC AAGGTGTGCC TCAATTATTCTTACG pgi 2804223 - 2802868 - | glucose-6-phosphate isomerase TERM 4350 2803502 - 2803514 + g 70 -7.7 -3.66908 | opp_overlap 2803502, overlap 2803499 GAAAGCTCAGATGAA GCGAA GTC TTCGC TTGCTTTTGCCGCAC TERM 4351 2804342 - 2804317 - R 100 -16.3 -4.8048 | CTCCCATAGCAAAAA GCCGTTTCTCT ATAG AGAGAAACGGC ACAAAGGATTATAAA yugK 2805523 - 2804351 - | alcohol dehydrogenase TERM 4352 2805607 - 2805630 + r 77 -6.8 -4.63107 | opp_overlap 2805607, overlap 2805602 GTCGAACTCAAAAAA GATAACTGCT CGAA AGCAATTATC TTTTCATTGTTTAAT TERM 4353 2805630 - 2805607 - R 91 -9 -5.15969 | opp_overlap 2805607 2805602 GTCGAACTCAAAAAA GATAACTGCT CGAA AGCAATTATC TTTTCATTGTTTAAT yugJ 2806808 - 2805645 - | alcohol dehydrogenase TERM 4354 2806237 - 2806251 + g 74 -4.3 -5.04385 | opp_overlap 2806235 ATCATATCAACCATG CCATA AATCG TATGG TTTTTTGGCACTGTG BPUM_2805 2806953 - 2807189 + | hypothetical protein TERM 4355 2807229 - 2807209 - T 100 -10.4 -5.82281 | overlap 2807223 AAAGACATAAAAAAA GGCCGCCT ATACG AGGCAGCC TAAGGCACCGTTTGA TERM 4356 2807234 - 2807252 + T 100 -11 -6.08342 | opp_overlap 2807223 2807237 ACGAGGCAGCCTAAG GCACCGTT TGA AGCGGTGC TTTTTTTATTTCTTG yugI 2807650 - 2807258 - | general stress protein 13 TERM 4357 2807764 - 2807807 + r 73 -9.6 -2.90615 | opp_overlap 2807765 2807785, overlap 2807761 TTAGATCCGTTCAAA AGGGGGAATACCTGAAAACA AGAA TGCTTTCTAGTATTCCCCCC TAATTTGAGAGGCAT TERM 4358 2807806 - 2807765 - R 100 -17.5 -4.09243 | opp_overlap 2807764 2807761, overlap 2807785 TAGATCCGTTCAAAA GGGGGAATACCTGAAAACA AGAA TGCTTTCTAGTATTCCCCC CTAATTTGAGAGGCA TERM 4359 2807818 - 2807843 + r 100 -8.3 -5.99154 | CCCCCTAATTTGAGA GGCATGAGTCC AAAT GGATTGATGCC TTTTTTTATTTAATA BPUM_2807 2809042 - 2807849 - | hypothetical protein BPUM_2808 2809543 - 2809043 - | hypothetical protein BPUM_2809 2809720 - 2810544 + | alpha/beta hydrolase yugE 2810801 - 2810541 - | hypothetical protein TERM 4360 2811049 - 2811037 - g 78 -4.1 -5.1675 | TGATGCATTAAAAAA GCGAT TGG ATCAC GGTGTATTTGGCTAT BPUM_2811 2810885 - 2812060 + | aminotransferase TERM 4361 2812078 - 2812097 + F 86 -8.6 -4.56597 | opp_overlap 2812078 2812081, overlap 2812090 CTTATATGATCGAAA GAACATCC TCAC GGGTGTTC TTTTTAAAGAAAAAA BPUM_2812 2812194 - 2813486 + | sensor histidine kinase BPUM_2813 2813666 - 2813487 - | hypothetical protein TERM 4362 2813596 - 2813585 - G 74 -4.4 -5.0065 | CAGCCATAAAGAAAA TCAC CGTG GTGA TTGCCGCTGGGATGT TERM 4363 2813605 - 2813617 + g 71 -4.8 -4.66537 | GTGGTGATTGCCGCT GGGA TGTAC TCCC TTTTATCTTCAGGAA kapB 2813758 - 2814150 + | kinase associated protein B kapD 2814767 - 2814147 - | sporulation inhibitor KapD BPUM_2816 2814974 - 2816161 + | major facilitator transporter TERM 4364 2816179 - 2816151 - f 71 -4.6 -4.72188 | opp_overlap 2816152, overlap 2816152 CGAAGGCAAAAGAAA GGAGTGTCTGAA CCAAC TTCAGATACTCT TTTTTCTTGTGTAGA TERM 4365 2816152 - 2816178 + F 100 -10.3 -5.60689 | opp_overlap 2816151 2816152 GAAGGCAAAAGAAAG GAGTGTCTGAA CCAAC TTCAGATACTC TTTTTTCTTGTGTAG TERM 4366 2816178 - 2816152 - f 71 -8.1 -3.42228 | opp_overlap 2816152, overlap 2816151 GAAGGCAAAAGAAAG GAGTGTCTGAA CCAAC TTCAGATACTC TTTTTTCTTGTGTAG TERM 4367 2817187 - 2817173 - g 70 -5.7 -4.386 | GAAGGCTTTACAAAA CGCTT GAAGA AAGCG AAAACAGATGGTGCA pbpD 2816270 - 2818171 + | penicillin binding protein 4 TERM 4368 2818360 - 2818372 + G 71 -4.9 -4.68511 | overlap 2818356 CGGTTTGCCTCTAGA TGAAT TCA ATTCA TTTATTTATATTGAA BPUM_2818 2818190 - 2818600 + | thiol-disulphide dehydrogenase TERM 4369 2818608 - 2818631 + T 100 -13.2 -4.69487 | opp_overlap 2818608 TATCATAAAAAAAAA GCATCCTCCG ATCG TGGAGGATGC TTTCTTTGTCTGTTT TERM 4370 2818631 - 2818608 - T 100 -12.5 -6.26417 | opp_overlap 2818608 TATCATAAAAAAAAA GCATCCTCC GATCGT GGAGGATGC TTTCTTTGTCTGTTT BPUM_2819 2819202 - 2818645 - | hypothetical protein TERM 4371 2818908 - 2818896 - G 82 -7.7 -4.47284 | opp_overlap 2818895 2818896 CAAATAAATAAACAA CGGAT GCA ATCCG AATTTTCTTTAAGTT BPUM_2820 2819389 - 2820990 + | sensory histidine kinase DcuS BPUM_2821 2820983 - 2821690 + | response regulator TERM 4372 2821698 - 2821724 + G 100 -7.3 -5.60993 | opp_overlap 2821700 ATCTATAATTTGACA CATCTGACCTT GTACA GAGGCCAGATG TTTTTTTATGGAACA BPUM_2822 2821692 - 2821850 + | hypothetical protein BPUM_2823 2822085 - 2823167 + | ABC transporter ATP-binding protein TERM 4373 2823178 - 2823198 + F 76 -9.8 -3.10022 | overlap 2823177 CTTAATTTGAGCATC GGGATAAG CGCGT CTTATCCC CTTGTTTCTCCTTTA TERM 4374 2823235 - 2823283 + F 93 -11.3 -5.1244 | opp_overlap 2823244 2823249, overlap 2823236 2823238 2823249 CTTTATTCGTAAAAG GTGGTAAAAGAAAAGCTGCAG CCTCGTT TTGCAGCTTTTCTTTTGCTAG TTTTTATCTTCATCA TERM 4375 2823236 - 2823282 + F 100 -14.8 -3.6638 | opp_overlap 2823244 2823249, overlap 2823235 2823238 2823249 TTTATTCGTAAAAGG TGGTAAAAGAAAAGCTGCAG CCTCGTT TTGCAGCTTTTCTTTTGCTA GTTTTTATCTTCATC TERM 4376 2823238 - 2823280 + F 100 -15.2 -3.39242 | opp_overlap 2823244 2823249, overlap 2823236 2823235 2823249 TATTCGTAAAAGGTG GTAAAAGAAAAGCTGCAG CCTCGTT TTGCAGCTTTTCTTTTGC TAGTTTTTATCTTCA TERM 4377 2823274 - 2823244 - f 85 -9.9 -4.14013 | opp_overlap 2823238 2823236 2823235 2823249, overlap 2823249 TAAAAGGTGGTAAAA GAAAAGCTGCA GCCTCGTTT TGCAGCTTTTC TTTTGCTAGTTTTTA TERM 4378 2823249 - 2823269 + F 76 -4.7 -5.14626 | opp_overlap 2823249 2823244, overlap 2823238 2823236 2823235 GGTGGTAAAAGAAAA GCTGCAG CCTCGTT TTGCAGC TTTTCTTTTGCTAGT TERM 4379 2823269 - 2823249 - f 73 -4 -5.07652 | opp_overlap 2823238 2823236 2823235 2823249, overlap 2823244 GGTGGTAAAAGAAAA GCTGCA GCCTCGTTT TGCAGC TTTTCTTTTGCTAGT TERM 4380 2824081 - 2824071 - g 82 -3.2 -5.46276 | overlap 2824074 AAGACAGACAAAAAA GAAG CCG CTCC TGCTGAGGAAGTACT TERM 4381 2824262 - 2824250 - g 71 -3.3 -5.0133 | TACTGGTTTAAAAAA GTCAG AGG CTGGC ACGATCATGCTAAAC TERM 4382 2824565 - 2824554 - g 78 -5.8 -4.81083 | GGGAATCAGCAAAAA GCCA TTAT TGGC CGTGAAGTTGACCGC BPUM_2824 2823327 - 2824862 + | ABC transporter ATP-binding protein BPUM_2825 2824855 - 2825901 + | ABC transporter ATP-binding protein BPUM_2826 2825902 - 2826861 + | ABC transporter ATP-binding protein TERM 4383 2826879 - 2826908 + F 100 -14.5 -5.00895 | gap 1, opp_overlap 2826879 ACGATGTATGATCAA TCCCCTGAAGGATA AAC TA-CCTTCAGGGGA TTTTTGTATGATAAA TERM 4384 2826908 - 2826879 - f 100 -14.5 -3.22476 | gap 1, opp_overlap 2826879 ACGATGTATGATCAA TCCCCTGAAGGATA AAC TA-CCTTCAGGGGA TTTTTGTATGATAAA TERM 4385 2828259 - 2828285 + G 74 -10.2 -2.57996 | overlap 2828258 GTACTGGTGACGTTG CCATCCTTTCAG CTT CTGGAAGAATGG GTCTTATGCCTTTCG BPUM_2827 2827037 - 2828374 + | CCS family citrate:cation symporter TERM 4386 2828389 - 2828414 + T 100 -6.8 -5.90231 | opp_overlap 2828389 ATCAAACAATAAAAA GCATGGGCTC TATTAC GGGCACATGC TTTTTTTATATTTCT TERM 4387 2828414 - 2828389 - T 81 -4.6 -5.39905 | opp_overlap 2828389 ATCAAACAATAAAAA GCATGGGCTC TATTAC GGGCACATGC TTTTTTTATATTTCT yufS 2828655 - 2828446 - | hypothetical protein TERM 4388 2828714 - 2828729 + H 75 -3.4 -5.31275 | overlap 2828711 ATATACAATGAGTTT TATTTT TGAT AAAATA TTTTTTGTGGTCAAA TERM 4389 2828773 - 2828760 - H 74 -5.3 -4.73092 | AGAACTCAAAACAAA TACAG TTTG CTGTA ATTCAGTTCAAACCA TERM 4390 2830052 - 2830068 + G 74 -7.9 -3.92804 | overlap 2830047 2830066 TCGGTACATTTTCAA TGGCTGG TCT CCCGCCA TTTAATGGTTTCTTA mrpA 2828875 - 2831280 + | monovalent cation/H+ antiporter subunit A mrpB 2831277 - 2831708 + | putative monovalent cation/H+ antiporter subunit B TERM 4391 2831871 - 2831861 - g 75 -2.4 -5.40072 | GGTGGCTTAAAAAAA GGAG CTC CACC CATTTTAACTAAGGG mrpC 2831708 - 2832049 + | putative monovalent cation/H+ antiporter subunit C mrpD 2832033 - 2833520 + | putative monovalent cation/H+ antiporter subunit D mrpE 2833527 - 2834006 + | putative monovalent cation/H+ antiporter subunit E mrpF 2834006 - 2834287 + | putative monovalent cation/H+ antiporter subunit F TERM 4392 2834394 - 2834376 - g 70 -9.6 -2.88544 | CCGGATGTTTATACA CGGATGCA TGC TGCATCCA AAGCATCGACACTTG mrpG 2834271 - 2834645 + | putative monovalent cation/H+ antiporter subunit G TERM 4393 2834683 - 2834648 - T 89 -9.8 -4.42386 | opp_overlap 2834653, overlap 2834653 CTCGTACTTATAAAA CGAAAGAAGCTCCTCA CATG CGAGGAGCTTCTTTTT ATGAATGAATCCAAC TERM 4394 2834678 - 2834653 - T 100 -14.1 -4.27483 | opp_overlap 2834653, overlap 2834648 ACTTATAAAACGAAA GAAGCTCCTCA CATG CGAGGAGCTTC TTTTTATGAATGAAT TERM 4395 2834653 - 2834678 + T 100 -13.4 -4.88067 | opp_overlap 2834648 2834653 ACTTATAAAACGAAA GAAGCTCCTC ACATGC GAGGAGCTTC TTTTTATGAATGAAT TERM 4396 2834707 - 2834726 + T 91 -7.1 -5.37043 | opp_overlap 2834707 ATCCAACTAAAAAAA GCTTCCG CTGCAC CGGGAGC TTTTTTATATGCGAT TERM 4397 2834726 - 2834707 - T 85 -4.9 -5.64006 | opp_overlap 2834707 ATCCAACTAAAAAAA GCTTCCG CTGCAC CGGGAGC TTTTTTATATGCGAT BPUM_2836 2835120 - 2834731 - | thioesterase TERM 4398 2834998 - 2835012 + g 70 -3.5 -4.85918 | overlap 2835003 TGCACCTCCGTGCAG CAGTC CAAAA GGCTG TTTTGTTCTGTGGTC comA 2835785 - 2835144 - | response regulator ComA TERM 4399 2835828 - 2835847 + r 90 -12.2 -3.83844 | opp_overlap 2835828 CCATTTTATATAAAA GACTTGGC AGAT GCCAAGTC TTATTCCTTAATAAA TERM 4400 2835847 - 2835828 - R 100 -12.2 -4.54047 | opp_overlap 2835828 CCATTTTATATAAAA GACTTGGC AGAT GCCAAGTC TTATTCCTTAATAAA comP 2838172 - 2835866 - | sensor histidine kinase ComP comX 2838356 - 2838186 - | competence pheromone precursor ComX BPUM_2840 2839257 - 2838334 - | hypothetical protein TERM 4401 2839407 - 2839388 - R 100 -9.4 -5.93809 | opp_overlap 2839388 TTTGGATAAAAAAAA GACTTGAT GATG ATCAAGTC TTTAAGAAATTTTCA TERM 4402 2839388 - 2839407 + r 78 -9.4 -3.60818 | opp_overlap 2839388 TTTGGATAAAAAAAA GACTTGAT GATG ATCAAGTC TTTAAGAAATTTTCA degQ 2839549 - 2839409 - | degradation enzyme regulation protein DegQ TERM 4403 2839880 - 2839894 + H 81 -6.4 -5.01732 | AGACGACAGACCCTA TTGTGG ACA CCGCAA TTTTTTGACGACATT BPUM_2842 2840055 - 2840408 + | hypothetical protein TERM 4404 2840417 - 2840437 + T 85 -10.3 -4.19238 | opp_overlap 2840417 GGCATAACAAAAAAA GCCGCTCTC AGC GTGGGCGGC TTTTACGATTCAAAC TERM 4405 2840437 - 2840417 - T 100 -8.1 -5.88565 | opp_overlap 2840417 GGCATAACAAAAAAA GCCGCTCTC AGC GTGGGCGGC TTTTACGATTCAAAC BPUM_2843 2841666 - 2840440 - | metal-dependent hydrolase TERM 4406 2841802 - 2841761 - R 91 -9 -5.03145 | opp_overlap 2841770 2841772, overlap 2841770 GAATCGGTCAAAAAA TAAAAAAAAGAGATCACC TGACTT GATGATCTCCTTTCTTCA ACGTTAGCTTTCATA TERM 4407 2841793 - 2841770 - R 100 -7.5 -6.47325 | opp_overlap 2841770 2841772, overlap 2841761 AAAAAATAAAAAAAA GAGATCACC TGACTT GATGATCTC CTTTCTTCAACGTTA pncB 2843275 - 2841806 - | nicotinate phosphoribosyltransferase TERM 4408 2842301 - 2842321 + g 74 -6.9 -4.36914 | TGCACCGAGAGCTGG CTGATCAAA TGC TGTGATCAG TTTTGTCCCAACACC TERM 4409 2842353 - 2842363 + g 74 -6.8 -4.30416 | CACACATCAATTTTG GCAC CCT GTGC TTTTAAATTCATGAT pncA 2843844 - 2843293 - | nicotinamidase BPUM_2846 2844312 - 2843905 - | hypothetical protein TERM 4410 2844215 - 2844249 + g 70 -3.6 -4.87803 | opp_overlap 2844224 AGAAGCGCTCGTTCT CTTAATGAACCGAGAA ACA TTCTTCGTTCATCGGG TTTTGTTTCAGCATG BPUM_2847 2844677 - 2844339 - | hypothetical protein TERM 4411 2844684 - 2844648 - G 100 -7.4 -5.67063 | gap 1, opp_overlap 2844672, overlap 2844650 TGTACCATAAAAAAA GACAGCTTCAGAAAAGG AATT CCCTTTC-AAAGCTGGC TACGCATTGAAACTC TERM 4412 2844682 - 2844650 - G 87 -8.6 -4.47611 | gap 1, opp_overlap 2844672, overlap 2844648 TACCATAAAAAAAGA CAGCTTCAGAAAAGG AATT CCCTTTC-AAAGCTG GCTACGCATTGAAAC yueG1 2844905 - 2844684 - | spore germination protein YueG1 TERM 4413 2845001 - 2844974 - R 100 -10.7 -5.95539 | opp_overlap 2844974 TCTCAAATAAAAAAA GACAGCTGATA TGTGAG CATCAGCTGTC TTTCTATGCATTAAA TERM 4414 2844974 - 2845001 + r 85 -10 -4.09108 | opp_overlap 2844974 TCTCAAATAAAAAAA GACAGCTGAT ATGTGAGC ATCAGCTGTC TTTCTATGCATTAAA yueG2 2845226 - 2845005 - | spore germination protein YueG2 BPUM_2850 2846396 - 2845293 - | hypothetical protein TERM 4415 2846578 - 2846559 - R 100 -10 -5.58074 | opp_overlap 2846559 TAAGCATGAAAAAAA GCAGACAC CTAT GCGTCTGC TTGTTACACTCTTTC TERM 4416 2846559 - 2846578 + r 70 -7.8 -3.69373 | opp_overlap 2846559 TAAGCATGAAAAAAA GCAGACAC CTAT GCGTCTGC TTGTTACACTCTTTC BPUM_2851 2846818 - 2846582 - | hypothetical protein BPUM_2852 2847001 - 2848485 + | hypothetical protein BPUM_2853 2849015 - 2848482 - | metal-dependent phosphohydrolase TERM 4417 2849181 - 2849143 - R 100 -14.1 -3.28712 | opp_overlap 2849154, overlap 2849145 2849146 2849154 GTTTTGCTTGTACAA GACGGAAAAAAGCAGTC GTTAT GACTGCTTTTTTCCATA CTCACGTGCATCATA TERM 4418 2849179 - 2849145 - R 100 -16.7 -3.21276 | opp_overlap 2849154, overlap 2849143 2849146 2849154 TTTGCTTGTACAAGA CGGAAAAAAGCAGTC GTTAT GACTGCTTTTTTCCA TACTCACGTGCATCA TERM 4419 2849178 - 2849146 - R 100 -18 -2.52623 | opp_overlap 2849154, overlap 2849145 2849143 2849154 TTGCTTGTACAAGAC GGAAAAAAGCAGTC GTTAT GACTGCTTTTTTCC ATACTCACGTGCATC TERM 4420 2849170 - 2849154 - R 89 -8 -5.17054 | opp_overlap 2849154, overlap 2849146 2849145 2849143 ACAAGACGGAAAAAA GCAGTC GTTAT GACTGC TTTTTTCCATACTCA TERM 4421 2849154 - 2849170 + r 91 -8.7 -5.1101 | opp_overlap 2849154 2849146 2849145 2849143 ACAAGACGGAAAAAA GCAGTCG TTA TGACTGC TTTTTTCCATACTCA BPUM_2854 2849853 - 2849161 - | short chain dehydrogenase TERM 4422 2849974 - 2850009 + r 79 -8.4 -4.14392 | gap 1, opp_overlap 2849979, overlap 2849977 2849979 AGCAATCTGCATAAA GAAA-AGCCTGCCTCCT TTA AAGAGACAGGCTATTTC TTTTCAGCCTTCACA TERM 4423 2849977 - 2850005 + r 74 -5.9 -4.66535 | opp_overlap 2849979, overlap 2849974 2849979 AATCTGCATAAAGAA AAGCCTGCCTCCT TTA AAGAGACAGGCTA TTTCTTTTCAGCCTT TERM 4424 2850003 - 2849979 - R 100 -12.9 -4.99043 | opp_overlap 2849977 2849974 2849979 TCTGCATAAAGAAAA GCCTGCCTCCT TTA AAGAGACAGGC TATTTCTTTTCAGCC TERM 4425 2849979 - 2850003 + r 77 -8.5 -3.93868 | opp_overlap 2849979, overlap 2849977 2849974 TCTGCATAAAGAAAA GCCTGCCTCCT TTA AAGAGACAGGC TATTTCTTTTCAGCC BPUM_2855 2850488 - 2850003 - | hypothetical protein TERM 4426 2850340 - 2850356 + g 93 -2.3 -6.13503 | opp_overlap 2850340 2850350, overlap 2850331 2850350 TGATCCCTCAATATA CTTGA GTTAATA TCAAG TTTTTTTTCTTGATA BPUM_2856 2853375 - 2850478 - | hypothetical protein TERM 4427 2852293 - 2852309 + g 70 -2.9 -4.9138 | opp_overlap 2852289, overlap 2852289 2852295 TTTTGCCAATAGCTT TGTCTGC AAG GCTGATA TTTTATTTCGATAGT TERM 4428 2853321 - 2853309 - G 79 -3.3 -5.26119 | GGTGGAAAAATAAAA CCGGC AGA ACCAG AATCAATATCATCGT BPUM_2857 2857847 - 2853372 - | FtsK/SpoIIIE family cell division protein YukA TERM 4429 2854499 - 2854515 + g 74 -9.5 -3.35996 | GTTCATGCATTTCGT CTTTGAC TAT GTCAAAG TTATCGATCACGATG TERM 4430 2856782 - 2856793 + g 74 -4.4 -5.03145 | GCTGCAAGAAATCAT CACT CACA AGTG TTTTTTCCCAAATTC TERM 4431 2856891 - 2856905 + g 78 -5.7 -4.76478 | TTGCTGGCGGTCGTA GAGCT CTTGC AGCTC TTTTCGTTTATTTTC BPUM_2858 2859215 - 2857899 - | hypothetical protein yukD 2859469 - 2859230 - | hypothetical protein TERM 4432 2859333 - 2859351 + g 91 -8.2 -4.68908 | CGCACCCAGCCGCCT TCTCGCTT AGG AAGTGAGA TTTGTTTTGCCTGCC BPUM_2860 2859858 - 2859565 - | hypothetical protein TERM 4433 2860146 - 2860169 + H 72 -2.3 -5.24449 | overlap 2860148 2860150 TTCTTTCAGCATGAT GCGCTCGCT TCTCAT AGCGATCTC TTTTTTAAATTTATG BPUM_2861 2860263 - 2861492 + | hypothetical protein TERM 4434 2861509 - 2861480 - f 78 -5.7 -5.17576 | opp_overlap 2861480 TATGAAGCTAAAAAA CGTCCATTTGTGA AATT TCACAAAGAGGCG TTTTTTTATTTTTTA TERM 4435 2861480 - 2861509 + F 100 -5.7 -6.28401 | opp_overlap 2861480 TATGAAGCTAAAAAA CGTCCATTTGTGA AATT TCACAAAGAGGCG TTTTTTTATTTTTTA ald 2861603 - 2862739 + | alanine dehydrogenase TERM 4436 2862768 - 2862744 - f 76 -9.9 -3.11326 | opp_overlap 2862746, overlap 2862742 2862746 CAGAAGCTTAATACA GACCCGCCCTT TTG ATGGGCGGGTT TTATTGTTAACTAAT TERM 4437 2862746 - 2862766 + F 100 -12.5 -4.91084 | opp_overlap 2862744 2862742 2862746 GAAGCTTAATACAGA CCCGCCCTT TTG ATGGGCGGG TTTTATTGTTAACTA TERM 4438 2862766 - 2862746 - f 91 -12.5 -3.10959 | opp_overlap 2862746, overlap 2862744 2862742 GAAGCTTAATACAGA CCCGCCCTT TTG ATGGGCGGG TTTTATTGTTAACTA bioY 2862855 - 2863451 + | biotin synthesis protein BioY TERM 4439 2863478 - 2863497 + T 100 -8.6 -5.2189 | opp_overlap 2863478 GATCATAGAAAAAAA GAGCCTGA TGCA TTAGGCTC TTTTTTCATCATTAC TERM 4440 2863497 - 2863478 - T 100 -6.4 -5.74122 | opp_overlap 2863478 GATCATAGAAAAAAA GAGCCTGA TGCA TTAGGCTC TTTTTTCATCATTAC spo0M 2864285 - 2863509 - | stage 0 sporulation control protein M TERM 4441 2864467 - 2864409 - R 76 -2.9 -5.48163 | gap 2, opp_overlap 2864423, overlap 2864416 2864423 AAATAAATGAAAAAA CATCACACAAAAAAGCTTATAGAAAAAAC AAC GTTTTCTCTACAAGCTTTCATGT-TAA-A GAATAATTGCCGCAA TERM 4442 2864462 - 2864416 - R 100 -14.8 -3.09112 | opp_overlap 2864423, overlap 2864409 2864423 TGAAAAAACATCACA CAAAAAAGCTTATAGAAAAAAC AAC GTTTTCTCTACAAGCTTTCATG TTAAAGAATAATTGC TERM 4443 2864455 - 2864423 - R 100 -13.7 -5.40625 | opp_overlap 2864423, overlap 2864416 2864409 ACATCACACAAAAAA GCTTATAGAAAAAAC AAC GTTTTCTCTACAAGC TTTCATGTTAAAGAA TERM 4444 2864423 - 2864455 + r 81 -9.3 -3.92324 | opp_overlap 2864416 2864409 2864423 ACATCACACAAAAAA GCTTATAGAAAAAAC AAC GTTTTCTCTACAAGC TTTCATGTTAAAGAA BPUM_2865 2865791 - 2864463 - | GntP family gluconate:proton (H+) symporter TERM 4445 2865925 - 2865904 - R 100 -11.5 -5.36441 | opp_overlap 2865902 GGCCTACATAAAAAA GGCCCCGCC AGTT GGCAGAGCC TCATCCTTTATTTCT pepA 2867423 - 2865933 - | leucyl aminopeptidase BPUM_2867 2867463 - 2867576 + | hypothetical protein BPUM_2868 2867749 - 2868225 + | acid phosphatase/vanadium-dependent haloperoxidase TERM 4446 2868237 - 2868263 + T 100 -8.1 -6.01369 | opp_overlap 2868237 GTAGAAGCGAAAAAA GCTTTGGAC CTAAAACTT GTCCAAAGC TTTTTTTATTCTTTA TERM 4447 2868263 - 2868237 - T 100 -8.1 -5.1925 | opp_overlap 2868237 GTAGAAGCGAAAAAA GCTTTGGAC CTAAAACTT GTCCAAAGC TTTTTTTATTCTTTA BPUM_2869 2868913 - 2868269 - | lipoprotein TERM 4448 2869013 - 2868990 - R 100 -5.3 -6.28967 | GAGAAACAAAAAAAA CCCACTTGC CTATCT ACAAGTGAG TTAAAACATTTGATA BPUM_2870 2869334 - 2869014 - | hypothetical protein BPUM_2871 2869643 - 2869416 - | hypothetical protein TERM 4449 2869633 - 2869654 + g 100 -8.7 -5.07275 | opp_overlap 2869633 CTGTCAAAAAAAAAA CGTGCATCC ACGA GGATACACG TTTTTGTCTATATCG TERM 4450 2869654 - 2869633 - G 100 -10.9 -6.34424 | opp_overlap 2869633 CTGTCAAAAAAAAAA CGTGCATCC ACGA GGATACACG TTTTTGTCTATATCG BPUM_2872 2870883 - 2869672 - | NADH dehydrogenase TERM 4451 2871021 - 2870988 - H 93 -4.7 -5.67283 | overlap 2870991 AATTTAAACAAAAAA TAAGTATGTGAAAAT CTGA ACTTTCACCTACATA AAACGAAGGCATTTG TERM 4452 2871018 - 2870991 - H 81 -6.4 -4.88687 | overlap 2870988 TTAAACAAAAAATAA GTATGTGAAAAT CTGA ACTTTCACCTAC ATAAAACGAAGGCAT BPUM_2873 2871280 - 2872278 + | ferredoxin--NAD(+) reductase TERM 4453 2872280 - 2872259 - T 79 -10.3 -3.32844 | CTCTTCATTCCACAA GCTTATTTG AAAA CAAATAAGC GAAAGCAAAAAAAGG TERM 4454 2872316 - 2872294 - T 100 -9.2 -5.72207 | opp_overlap 2872294 GCGAAAGCAAAAAAA GGAGTTCC CACAAAC GGAACTCC TTTTTCGTCTATTTA TERM 4455 2872294 - 2872316 + T 91 -9.2 -4.90217 | opp_overlap 2872294 GCGAAAGCAAAAAAA GGAGTTCC CACAAAC GGAACTCC TTTTTCGTCTATTTA BPUM_2874 2872531 - 2872325 - | hypothetical protein BPUM_2875 2872727 - 2873143 + | hypothetical protein TERM 4456 2873150 - 2873166 + T 100 -6.6 -5.68039 | opp_overlap 2873150 2873148 GCTATATGAGAAAGA GACACT GCATG AGTGTC TTTTTTTATGGCTTT TERM 4457 2873240 - 2873195 - T 89 -7.8 -5.14563 | gap 1, overlap 2873235 TTCTTCATCAAAAAA GCCTCCTCAATCGTGTTGTTT ACAAA AAACAA-ACGAACAAGAAGGC TTATCTTCATTCACG BPUM_2876 2873626 - 2873264 - | iron sulfur assembly protein dapF 2874554 - 2873700 - | diaminopimelate epimerase TERM 4458 2874451 - 2874465 + g 75 -8.6 -3.7511 | overlap 2874462 2874464 GAAGAAACCTGGATT GCTATC TCT GATAGC TTCTCTTCTGGAAGC TERM 4459 2874640 - 2874674 + G 86 -11.6 -3.39803 | opp_overlap 2874640, overlap 2874645 CCCGTTTTTCATACA TAAAAGCTCTTTGCTG CCA TGGCAAGGGGCTTTTA TTATGCATATGCCTC TERM 4460 2874645 - 2874669 + G 85 -7.1 -4.79955 | opp_overlap 2874640, overlap 2874640 TTTTCATACATAAAA GCTCTTTGCTG CCA TGGCAAGGGGC TTTTATTATGCATAT BPUM_2878 2874573 - 2874737 + | hypothetical protein TERM 4461 2874799 - 2874823 + T 95 -12.9 -3.56821 | opp_overlap 2874799 AAAATATGAAAAAAA TGCACCTCATG ACC CATGTGGTGCA TTTAAAACATCTCAT TERM 4462 2874823 - 2874799 - T 100 -12.9 -5.69023 | opp_overlap 2874799 AAAATATGAAAAAAA TGCACCTCATG ACC CATGTGGTGCA TTTAAAACATCTCAT BPUM_2879 2875061 - 2874825 - | hypothetical protein BPUM_2880 2875063 - 2875230 + | hypothetical protein TERM 4463 2876230 - 2876246 + G 70 -8 -3.60098 | opp_overlap 2876222, overlap 2876222 AAAACGAGCCGCTTC CTGAGG CTTAT CCTCAG TTTAAGCTAAAAGGT BPUM_2881 2875317 - 2876384 + | NADH dehydrogenase TERM 4464 2876408 - 2876428 + T 100 -9 -5.60993 | opp_overlap 2876408 GAATTTGATCTCAAA GCTCCTTC TCGTC GAGGGAGC TTTTTTTATGAAACG TERM 4465 2876453 - 2876442 - T 70 -7.2 -3.72576 | GCTTTTTTTATGAAA CGGC ATGT GCCG ATGAACGGGTCAATT BPUM_2882 2876664 - 2876434 - | hypothetical protein TERM 4466 2876738 - 2876696 - R 78 -10.8 -2.64747 | opp_overlap 2876696 2876697 2876737, overlap 2876695 2876700 2876704 2876726 TCATTTCATTATAAT CGAACAAACGTTCTTTTTCA ACC CAAAAAGGAACGTTTGTTCT GTTTATTTTCTCAAA TERM 4467 2876696 - 2876739 + r 100 -11.4 -4.77173 | gap 1, opp_overlap 2876696 2876695 2876700 2876704 2876726, overlap 2876697 2876737 TCATTTCATTATAAT C-GAACAAACGTTCTTTTT CAACCCA AAAAGGAACGTTTGTTCTG TTTATTTTCTCAAAA TERM 4468 2876697 - 2876737 + r 100 -15.1 -3.99938 | opp_overlap 2876696 2876695 2876700 2876704 2876726, overlap 2876696 CATTTCATTATAATC GAACAAACGTTCTTTTT CAACCCA AAAAGGAACGTTTGTTC TGTTTATTTTCTCAA TERM 4469 2876734 - 2876700 - R 78 -10.2 -3.25072 | opp_overlap 2876697 2876696, overlap 2876696 2876695 2876704 2876726 TTCATTATAATCGAA CAAACGTTCTTTTTCA ACC CAAAAAGGAACGTTTG TTCTGTTTATTTTCT TERM 4470 2876777 - 2876758 - R 81 -4.3 -5.40474 | opp_overlap 2876737 ATTTTCTCAAAAAAA GAACAGT TTAATC ACTGCTC TCCGTGTAACCGTAT BPUM_2883 2877094 - 2876765 - | hypothetical protein BPUM_2884 2877279 - 2877515 + | iron-sulfur assembly protein TERM 4471 2877558 - 2877529 - T 75 -10.1 -2.89743 | opp_overlap 2877535, overlap 2877535 AATTCATATATGAGA TAAAAACGACCCA AATT CGGGTCGTTTTTT TTATTTTAACTTCTC TERM 4472 2877535 - 2877552 + T 100 -8.4 -6.34616 | opp_overlap 2877529 2877535 TATATGAGATAAAAA CGACCC AAATTC GGGTCG TTTTTTTTATTTTAA TERM 4473 2877552 - 2877535 - T 91 -9.1 -5.02502 | opp_overlap 2877535, overlap 2877529 TATATGAGATAAAAA CGACCCA AATT CGGGTCG TTTTTTTTATTTTAA BPUM_2885 2879529 - 2877559 - | peptidase TERM 4474 2879397 - 2879413 + g 70 -2.9 -4.98255 | CTCGAACCCATAAAT GGATGTT GTA ATCGTCC TTTTTGTCATTCACC TERM 4475 2879644 - 2879620 - R 100 -7.2 -6.23317 | opp_overlap 2879623 ACAAAAATAAAAAAA GAACGTGC ATTTTTACA GCACGTTC TCAGATTGTTGACAA TERM 4476 2879655 - 2879693 + r 100 -19.2 -4.18506 | opp_overlap 2879661, overlap 2879661 CGTTCTCAGATTGTT GACAAAGGGCTAAAATGA TCT TGATTTTAGCCCTTTGTC TTCTTTTCAGCGTGA TERM 4477 2879661 - 2879687 + r 90 -11 -4.45253 | opp_overlap 2879661, overlap 2879655 CAGATTGTTGACAAA GGGCTAAAATGA TCT TGATTTTAGCCC TTTGTCTTCTTTTCA TERM 4478 2879687 - 2879661 - R 86 -11 -3.87373 | opp_overlap 2879661 2879655 CAGATTGTTGACAAA GGGCTAAAATGA TCT TGATTTTAGCCC TTTGTCTTCTTTTCA TERM 4479 2879822 - 2879845 + r 79 -9 -4.00348 | gap 1, opp_overlap 2879825, overlap 2879814 2879825 TTGTCTACACGCTGA GAACGTGC-AT TTT ATAGCACGTTC TTTACTTGATTGACA thrB 2880765 - 2879833 - | homoserine kinase TERM 4480 2880477 - 2880460 - G 80 -11.3 -2.57463 | overlap 2880459 AATGGCTGCCACAAT GGCAGCA GCAC TGCTGCC CAGCCCCCGTGCCAA thrC1 2881823 - 2880762 - | threonine synthase thrA 2883124 - 2881823 - | homoserine dehydrogenase TERM 4481 2882088 - 2882078 - G 73 -5.4 -4.62872 | ATGAATTCTTAAAAA TTGC TGA GCAA ATACTTCCGATGGTG TERM 4482 2883168 - 2883150 - R 71 -8.2 -3.53091 | opp_overlap 2883150 ACCTTTCTCCGTAAA TGTCCTCT CTA AAAGGACA TTTGTTAACCTAACA TERM 4483 2883341 - 2883322 - R 84 -8.6 -4.37092 | gap 1, opp_overlap 2883321 2883333, overlap 2883332 2883333 ATTTTTGTCAGAAAA GCTCCC-GA AAC TCAGGGAGC CTGATATGATGAGCG BPUM_2889 2884316 - 2883333 - | D-isomer specific 2-hydroxyacid dehydrogenase cotS 2885430 - 2884402 - | spore coat protein S TERM 4484 2884538 - 2884548 + g 71 -4 -4.84529 | TAATCTAGCCGTTCT TCAT AAT ATGA TTTTTCAGTTTCTCC TERM 4485 2885594 - 2885582 - g 79 -3.3 -5.38249 | ACGAAGTAGAAAAAA CAGCA AGA CGCCG TTTACAAGAACGAGG pgpA 2885545 - 2886045 + | phosphatidylglycerophosphatase TERM 4486 2886055 - 2886081 + T 100 -10.1 -5.67967 | opp_overlap 2886055 GAATAAAGCAAAAAA GAGGACGCGCG CGTAA CGCTTGTCCTC TTTTTTTATGATAAT TERM 4487 2886081 - 2886055 - T 100 -8.6 -5.46129 | opp_overlap 2886055 GAATAAAGCAAAAAA GAGGACGCGCGC GTA ACGCTTGTCCTC TTTTTTTATGATAAT BPUM_2892 2886857 - 2886087 - | HAD family hydrolase BPUM_2893 2887313 - 2886879 - | hypothetical protein BPUM_2894 2887608 - 2887333 - | hypothetical protein TERM 4488 2887853 - 2887835 - g 75 -7.4 -4.41047 | overlap 2887838 ATTCTTCAAGTAAAA CCATCCGA CTG TCGGATCG TCATGAAGGAAATAA BPUM_2895 2887729 - 2888364 + | lipoprotein TERM 4489 2888372 - 2888399 + T 100 -11.4 -4.3953 | opp_overlap 2888377, overlap 2888377 AAAATTAATACGAGA AAAAACGCCAGA GATC TCTGGCGTTTTC TTTGTTATGCTTGCG TERM 4490 2888377 - 2888394 + T 93 -11.3 -5.14682 | opp_overlap 2888377, overlap 2888372 TAATACGAGAAAAAA CGCCAGA GATC TCTGGCG TTTTCTTTGTTATGC TERM 4491 2888394 - 2888377 - T 100 -11.3 -5.36965 | opp_overlap 2888377 2888372 TAATACGAGAAAAAA CGCCAGA GATC TCTGGCG TTTTCTTTGTTATGC lipA 2889300 - 2888404 - | lipoyl synthase TERM 4492 2889721 - 2889708 - g 74 -4.5 -4.82667 | GCACTATACGAAAAA GTCGC CATC ACGAC ACAAGTTCCATGGTA BPUM_2897 2889591 - 2890571 + | M23B subfamily peptidase TERM 4493 2890579 - 2890609 + T 72 -4.7 -4.84527 | gap 1, opp_overlap 2890579 GGCATTAAAGAAAAA GGAGAAGTTTAGCG TTGT CGCTCT-CTTCTCC TTTTTCATGTCTAAC TERM 4494 2890609 - 2890579 - T 79 -4.7 -5.33405 | gap 1, opp_overlap 2890579 GGCATTAAAGAAAAA GGAGAAGTTTAGCG TTGT CGCTCT-CTTCTCC TTTTTCATGTCTAAC BPUM_2898 2890858 - 2890628 - | hypothetical protein TERM 4495 2890984 - 2890962 - R 93 -4.8 -5.72616 | opp_overlap 2890962 2890959 AGTCATATAAAAAAA CAGCCCTA TCATTCC TTGGGCTG TTATTCTTTCTTCCC yunB 2891755 - 2890985 - | sporulation protein YunB BPUM_2900 2892130 - 2891825 - | hypothetical protein ushA 2893571 - 2892198 - | bifunctional 5'-nucleotidase/2',3'-cyclic phosphodiesterase BPUM_2902 2894486 - 2893635 - | hypothetical protein TERM 4496 2894520 - 2894539 + H 71 -3.5 -5.16133 | opp_overlap 2894519, overlap 2894533 CTTTCATGTATAGAC GGCTTCC TCACAC GAAAGCC TTTTTCTCTTGTCAT TERM 4497 2895239 - 2895206 - g 100 -14 -2.93382 | TCGCAGATGGATAGA GGGTGCATCGTCTT CTCAGC AAGACGATGCACAC ATTGCGAAGTCATTT TERM 4498 2895311 - 2895322 + G 74 -4.4 -5.00616 | GCTTGATCCGTATCA TGAG AACA CTCA TTTTTTAGAGCAGCA TERM 4499 2895462 - 2895484 + G 70 -2.7 -5.00884 | overlap 2895467 ACGGGCAATTGGTCA GAGATGAGT GAAAA ACTCCTTTC TTTTTTGAAACAAAT BPUM_2903 2894805 - 2895965 + | transcriptional regulator TERM 4500 2897173 - 2897161 - g 79 -3.4 -5.38054 | CTTCATAAAGAAAAA TCAC CTGTC GTGA CATATAAAAGGTCAT BPUM_2904 2896030 - 2897190 + | hypothetical protein TERM 4501 2897202 - 2897223 + T 76 -3.7 -5.2189 | gap 1, opp_overlap 2897202 ATGAACATAAAAAAA CCGATCCATC TGT GCTG-ATCGG TTTTTTGATAATTAA TERM 4502 2897223 - 2897202 - T 89 -3.7 -5.82172 | gap 1, opp_overlap 2897202 ATGAACATAAAAAAA CCGATCCATC TGT GCTG-ATCGG TTTTTTGATAATTAA BPUM_2905 2898432 - 2897242 - | major facilitator superfamily multidrug:cation symporter TERM 4503 2898581 - 2898563 - R 100 -6.7 -5.95539 | opp_overlap 2898563 TTCCAAATAAAAAAA TACCCGC AAATA GCGAGTA TTCTTATGACATTAT BPUM_2906 2899846 - 2898593 - | aminotransferase end1 2899997 - 2900875 + | deoxyribonuclease I TERM 4504 2900911 - 2900879 - T 100 -13.6 -5.06816 | opp_overlap 2900879 2900883 ATTTGGGAATAAAAA GAAAGGCACTGC TATGAACAG GCAGTGCCTTTC TTTTTATCAAGCGGA TERM 4505 2900879 - 2900911 + T 100 -14.3 -4.82901 | opp_overlap 2900879, overlap 2900883 ATTTGGGAATAAAAA GAAAGGCACTGCT ATGAACA GGCAGTGCCTTTC TTTTTATCAAGCGGA TERM 4506 2900883 - 2900907 + T 91 -9.3 -4.96501 | opp_overlap 2900879, overlap 2900879 GGGAATAAAAAGAAA GGCACTGCT ATGAACA GGCAGTGCC TTTCTTTTTATCAAG BPUM_2908 2901633 - 2900890 - | hypothetical protein BPUM_2909 2902693 - 2901656 - | iron ABC transporter membrane protein BPUM_2910 2903702 - 2902686 - | iron ABC transporter membrane protein TERM 4507 2903302 - 2903291 - G 78 -2.2 -5.46706 | AGCCCAAAAGAAAAA CAAG CATC CCTG CAATTGCCGCACCTA TERM 4508 2903735 - 2903762 + r 72 -8.6 -3.24694 | opp_overlap 2903735, overlap 2903733 2903731 TCTGTTATGGAAAAA GGAGAAAATG GTTTTTCA CATTTTCTCC TCTGTTATCCTTATT TERM 4509 2903762 - 2903735 - R 86 -8.6 -4.65895 | opp_overlap 2903735 2903733 2903731 TCTGTTATGGAAAAA GGAGAAAATG GTTTTTCA CATTTTCTCC TCTGTTATCCTTATT BPUM_2911 2904726 - 2903773 - | iron ABC transporter BPUM_2912 2905774 - 2904866 - | lysophospholipase TERM 4510 2905479 - 2905489 + g 91 -6.8 -5.47218 | opp_overlap 2905479 ACATCTGTGACAGTA GGTG TAT CACC TTTTTTTCCATCCGA TERM 4511 2905835 - 2905793 - R 85 -11.4 -3.53012 | opp_overlap 2905795 2905799 2905800, overlap 2905795 2905799 TTTCGCTCCTTCAAA CAGAAACGAGAATGGCCAGC TGC GCTAGTCATCCTCATTCCTA TATCTTATTCATTGC TERM 4512 2905833 - 2905795 - R 84 -11.8 -3.34398 | opp_overlap 2905795 2905799 2905800, overlap 2905793 2905799 TCGCTCCTTCAAACA GAAACGAGAATGGCCAGC TGC GCTAGTCATCCTCATTCC TATATCTTATTCATT TERM 4513 2905829 - 2905799 - R 83 -9 -4.32857 | opp_overlap 2905799 2905795 2905800, overlap 2905795 2905793 TCCTTCAAACAGAAA CGAGAATGGCCAGC TGC GCTAGTCATCCTCA TTCCTATATCTTATT BPUM_2913 2906739 - 2905840 - | hydrolase TERM 4514 2906866 - 2906897 + r 90 -11.8 -3.95424 | opp_overlap 2906866 2906870, overlap 2906870 GATCATTCACCATAA CAAACAGTTATTCA TTAA TGAACAACTGTTTG TTTACTGTTACTCAT TERM 4515 2906897 - 2906866 - R 100 -14 -3.42996 | opp_overlap 2906866 2906870, overlap 2906870 GATCATTCACCATAA CAAACAGTTATTCA TTAA TGAACAACTGTTTG TTTACTGTTACTCAT TERM 4516 2906870 - 2906893 + r 77 -6.8 -4.56883 | opp_overlap 2906866 2906870, overlap 2906866 ATTCACCATAACAAA CAGTTATTCA TTAA TGAACAACTG TTTGTTTACTGTTAC TERM 4517 2906893 - 2906870 - R 83 -9 -4.35885 | opp_overlap 2906870 2906866, overlap 2906866 ATTCACCATAACAAA CAGTTATTCA TTAA TGAACAACTG TTTGTTTACTGTTAC TERM 4518 2907018 - 2907038 + r 90 -11.9 -3.69283 | opp_overlap 2907018 CCAGACACGAAAAAA GACGAACGG TCA TCGTTCGTC TTCTTCCCTCACTTC TERM 4519 2907038 - 2907018 - R 100 -11.2 -5.24989 | opp_overlap 2907018 CCAGACACGAAAAAA GACGAACG GTCAT CGTTCGTC TTCTTCCCTCACTTC psiE 2907475 - 2907047 - | phosphate-starvation-inducible protein PsiE BPUM_2915 2908820 - 2907513 - | sensor histidine kinase BPUM_2916 2909502 - 2908807 - | response regulator BPUM_2917 2909601 - 2909699 + | hypothetical protein TERM 4520 2910473 - 2910461 - g 91 -6.3 -5.44119 | opp_overlap 2910460 TGGAGGCGAAAAAAA CGATT TGG AATCG GATTTGGCTCATCTG BPUM_2918 2909755 - 2910963 + | hypothetical protein TERM 4521 2910981 - 2911003 + T 79 -2.1 -5.56673 | gap 2, opp_overlap 2910981 ACTTCATGAAAAAAA CCGATCATTCC TAG GGAA--ATCGG TTTTTTGTTGTAAAT TERM 4522 2911003 - 2910981 - T 79 -2.1 -5.52986 | gap 2, opp_overlap 2910981 ACTTCATGAAAAAAA CCGATCATTCC TAG GGAA--ATCGG TTTTTTGTTGTAAAT BPUM_2919 2913076 - 2911073 - | hypothetical protein TERM 4523 2913237 - 2913257 + r 70 -4.7 -4.68994 | opp_overlap 2913237, overlap 2913240 TACTAGTAGAGATAA GGCGAACTA TAA TAGTTCATC TTTTTCAATAGTGCT TERM 4524 2913570 - 2913556 - R 91 -8.6 -5.05782 | opp_overlap 2913555 2913556 ATGGAGGCGAAAAAA GCGATT TGG AATCGC ATTTGGATCATCTGT TERM 4525 2914079 - 2914059 - R 100 -9.7 -5.72053 | opp_overlap 2914059 GAAGTAAAGAAAAAA GGCGAATGG CTA CAATTCGCC TTTTTTAATATGATG TERM 4526 2914059 - 2914079 + r 100 -9.7 -5.23316 | opp_overlap 2914059 GAAGTAAAGAAAAAA GGCGAATGG CTA CAATTCGCC TTTTTTAATATGATG BPUM_2921 2915061 - 2914129 - | hypothetical protein TERM 4527 2914936 - 2914916 - G 73 -2.5 -5.0916 | GGTTGAACATAAAAA GCTAAACCC ATG GACTCTAGC TCTTCCATATCTCGC TERM 4528 2915083 - 2915101 + H 84 -8.9 -4.52142 | opp_overlap 2915083 TTCCTTCTGAAAAAA GGTGACA TGTTT TGTCACC TTTATGTTTTATACT TERM 4529 2915101 - 2915083 - H 91 -8.9 -5.00616 | opp_overlap 2915083 TTCCTTCTGAAAAAA GGTGACA TGTTT TGTCACC TTTATGTTTTATACT acpH 2915146 - 2915796 + | [acyl-carrier-protein] phosphodiesterase TERM 4530 2915816 - 2915857 + T 90 -11.9 -3.63569 | opp_overlap 2915821, overlap 2915821 TATTTTTTCAAAAAC AAAAAGACCAAAAACGT TTGATATC ACGTTTTTGGTCTTTTA TTATTAGCCGATTGA TERM 4531 2915852 - 2915821 - T 100 -11.8 -5.61881 | opp_overlap 2915816 2915821 TTTCAAAAACAAAAA GACCAAAAACGT TTGATATC ACGTTTTTGGTC TTTTATTATTAGCCG TERM 4532 2915821 - 2915852 + T 100 -11.8 -4.89477 | opp_overlap 2915821, overlap 2915816 TTTCAAAAACAAAAA GACCAAAAACGT TTGATATC ACGTTTTTGGTC TTTTATTATTAGCCG sufB 2917258 - 2915861 - | ABC transporter ATP-binding protein TERM 4533 2916490 - 2916502 + g 77 -4.7 -5.03715 | opp_overlap 2916489 2916490, overlap 2916489 2916488 GAATCGTTGTATAAC GGCAG TAG CCGCC TTTTTTCACGATGAT TERM 4534 2917012 - 2917026 + g 70 -7.2 -3.75461 | opp_overlap 2917000, overlap 2917001 AACGCTCTGATGGCT TTACGT AGT ACGTAA TTTCATCAAAGTTTA nifU 2917722 - 2917276 - | Fe-S cluster assembly protein NifU csd 2918932 - 2917712 - | cysteine desulfurase sufD 2920245 - 2918932 - | iron ABC transporter membrane protein TERM 4535 2919675 - 2919706 + g 70 -5.9 -4.3586 | opp_overlap 2919695 GATCATCTGCTACAA CGATGACATGGTT GAACAA AGTCGTGTCGTCG TTTTCATGTAGGTAG TERM 4536 2920185 - 2920199 + g 79 -8.6 -4.16681 | ATGCCGGTTCCTGAT GCTTCT CGG AGAAGC TTTTGACATAATCTT sufC 2921049 - 2920264 - | iron ABC transporter ATP-binding protein TERM 4537 2921136 - 2921118 - R 71 -4.6 -4.70353 | overlap 2921132 2921133 TATAACAAATTAAAA GTGAATAC AAC ACATTCAC GATAAGCGTGAGAGG TERM 4538 2921251 - 2921227 - R 89 -10 -4.55295 | opp_overlap 2921226 GTTTTCATAAAGAAA GGACGGGAAA CTGTT CTCCCCGTCC CTTAGCTATTTAATA BPUM_2928 2921428 - 2921261 - | hypothetical protein BPUM_2929 2921982 - 2921614 - | carboxymuconolactone decarboxylase TERM 4539 2921802 - 2921819 + g 77 -4.9 -5.02421 | gap 1, opp_overlap 2921773, overlap 2921805 CCTGTGCATGAATAC TGA-TGCC AAG GGCAATCA TTTGTTTTTCCTTTT TERM 4540 2922075 - 2922054 - R 100 -13.1 -5.53079 | opp_overlap 2922071, overlap 2922071 AAAATACACAAAAAA CCTCGCTTT GACG AAAGCGAGG TTAACACATCGTTAT BPUM_2930 2922908 - 2922087 - | ABC transporter ATP-binding protein TERM 4541 2922254 - 2922264 + g 73 -5.4 -4.67234 | overlap 2922257 TTGTTTGCTCAAGTT CGAT TGA ATCG TTTTTCGGATTCAAT BPUM_2931 2923591 - 2922923 - | ABC transporter ATP-binding protein BPUM_2932 2924609 - 2923584 - | ABC transporter ATP-binding protein TERM 4542 2924742 - 2924714 - g 71 -2.3 -5.15634 | opp_overlap 2924735, overlap 2924721 2924735 GAGGTCAGTAAAAAA GACCTAACTGC AATGCAA GCAGAAAGGCC TTTTATGTTCAATAC BPUM_2933 2924645 - 2924797 + | hypothetical protein BPUM_2934 2925316 - 2924975 - | hypothetical protein TERM 4543 2925447 - 2925432 - R 85 -6.1 -5.38321 | opp_overlap 2925432 AAATATGACAAAAAA CCGCT TTATTT AGCGG TTTCAATCATTTCAT BPUM_2935 2925739 - 2925437 - | thioredoxin TERM 4544 2925612 - 2925636 + g 74 -4.9 -4.87133 | AAAGGTACATCCGGC TGCATGGTGTC TAC GACAGCGAGCA TTTTCTTTGCCAGCT TERM 4545 2925709 - 2925688 - G 71 -4.6 -4.60073 | opp_overlap 2925703 2925706 TATATAAGTATAAAA GAAATAAA TCGTCC TTTATTTC CTTGAAATCATGTTC BPUM_2936 2926105 - 2925752 - | TOPRIM domain-containing protein TERM 4546 2926214 - 2926189 - R 81 -6.9 -4.72986 | opp_overlap 2926189 2926191 CACTTGCACTAAAAA GACTGCAGC TTATGCTC ACTGCAGTC TCATCTGTGATTAGC BPUM_2937 2926470 - 2926225 - | hypothetical protein TERM 4547 2926494 - 2926463 - G 82 -8.1 -4.45168 | gap 1, opp_overlap 2926463 TTTTGAAAAGACAAA TTGGACACCCC-CC ATATA GGTAGAGTGTCCAA TTTCACGTGAATTAG gcvH 2926889 - 2926506 - | glycine cleavage system protein H arsC 2927315 - 2926956 - | arsenate reductase (glutaredoxin) TERM 4548 2927440 - 2927402 - R 100 -21.4 -4.07535 | opp_overlap 2927408, overlap 2927408 AAGGTGCAGAAAGAA GACAAAGGGCTAAAATAA AGA TCATTTTAGCCCTTTGTC AACAATCTGAGGTAC TERM 4549 2927408 - 2927434 + r 86 -11 -3.87373 | opp_overlap 2927402 2927408 CAGAAAGAAGACAAA GGGCTAAAATAA AGA TCATTTTAGCCC TTTGTCAACAATCTG TERM 4550 2927434 - 2927408 - R 100 -13.2 -4.42743 | opp_overlap 2927408, overlap 2927402 CAGAAAGAAGACAAA GGGCTAAAATAA AGA TCATTTTAGCCC TTTGTCAACAATCTG BPUM_2940 2929266 - 2927485 - | acyl-CoA dehydrogenase BPUM_2941 2930456 - 2929281 - | acetyl-CoA acetyltransferase BPUM_2942 2932856 - 2930469 - | 3-hydroxyacyl-CoA dehydrogenase TERM 4551 2932877 - 2932894 + H 91 -7.1 -5.24129 | opp_overlap 2932872 TCCCCCTAAACATTT TGAATGA ACAG TCATTCA TTTTTTGTGCAAAAA BPUM_2943 2933056 - 2933193 + | hypothetical protein TERM 4552 2933446 - 2933459 + G 72 -8.1 -3.89346 | GCAGCTCAGGGCAAG GCCAG TCTA CTGGC TTTATGCAATAGGAG BPUM_2944 2933223 - 2933471 + | hypothetical protein BPUM_2945 2933484 - 2933831 + | hypothetical protein TERM 4553 2933902 - 2933873 - f 100 -11.7 -4.45083 | gap 1, opp_overlap 2933873 2933876 TGGATATTCATAAAA TAATGGATCCG-AT TTT ATCCGGATCCATTA TTTTCAAAATGACAA TERM 4554 2933873 - 2933902 + F 90 -11.7 -4.11216 | gap 1, opp_overlap 2933873, overlap 2933876 TGGATATTCATAAAA TAATGGATCCG-AT TTT ATCCGGATCCATTA TTTTCAAAATGACAA TERM 4555 2933876 - 2933899 + F 79 -9 -4.18506 | gap 1, opp_overlap 2933873, overlap 2933873 ATATTCATAAAATAA TGGATCCG-AT TTT ATCCGGATCCA TTATTTTCAAAATGA TERM 4556 2934051 - 2934061 + G 93 -2.6 -6.01187 | TGTACAAAAAAAGCT TATT AAT AATA TTTTTTTCTTTGGTT TERM 4557 2934374 - 2934360 - g 71 -2.2 -5.24003 | AAGAAAAATCAAAAA TAAATA CAA TATCTA TAAAAAGCTCCTATG TERM 4558 2934801 - 2934788 - g 100 -6.7 -5.72207 | TCTAAAGGAAAAAAA GTTCG CATA CGAAC TTACACTTCAGGTAA BPUM_2946 2934035 - 2934898 + | hypothetical protein BPUM_2947 2934917 - 2935180 + | hypothetical protein TERM 4559 2935194 - 2935177 - T 91 -3.5 -5.86061 | opp_overlap 2935191, overlap 2935191 TGGCATTAAAAAAAA GTAATTT CACC AAACTAC CTCTTCGTGTGGGGT TERM 4560 2935191 - 2935211 + T 93 -4.7 -5.7827 | opp_overlap 2935177 2935191 AGTAATTTCACCAAA CTACCTC TTCGTGT GGGGTAG TTTTTTATTTATCTT BPUM_2948 2935479 - 2935225 - | hypothetical protein TERM 4561 2935509 - 2935538 + r 90 -11.6 -4.14511 | gap 1, opp_overlap 2935509 2935531 TTTTTTTAGAAAAAA GCCTGAC-TCTGT ACGTA ACAGATGTCAGGC TTTTGACATACGATT TERM 4562 2935538 - 2935509 - R 100 -11.6 -5.24129 | gap 1, opp_overlap 2935509, overlap 2935531 TTTTTTTAGAAAAAA GCCTGAC-TCTGT ACGTA ACAGATGTCAGGC TTTTGACATACGATT BPUM_2949 2936382 - 2935552 - | iron ABC transporter TERM 4563 2936486 - 2936500 + r 70 -5.8 -4.27316 | opp_overlap 2936485 2936498 TGTATCAGATTTAAG TGATTT TGA AAATCA TTTTCAATTAAAAAA BPUM_2950 2936977 - 2936531 - | hypothetical protein TERM 4564 2937237 - 2937214 - g 81 -7.5 -4.67234 | gap 1, opp_overlap 2937214 2937213 AGCCAATGCGAAAAA GCTTGC-CGA AGAAA TCGAGCAAGC CTCTTTATCTGAAGC BPUM_2951 2937092 - 2937934 + | short chain dehydrogenase TERM 4565 2937946 - 2937970 + T 100 -7.1 -5.77856 | opp_overlap 2937946 ATAAGCATAAAAAAA CAGGTAGACCT TTA ACGTCCACCTG TTTTTTTCATTTATT TERM 4566 2937970 - 2937946 - T 100 -9.3 -5.73339 | opp_overlap 2937946 ATAAGCATAAAAAAA CAGGTAGACCT TTA ACGTCCACCTG TTTTTTTCATTTATT BPUM_2952 2939351 - 2937981 - | peptidase TERM 4567 2938663 - 2938681 + g 70 -7.5 -3.86015 | AAGCTCGCCACTTTA TCAATGC CATCT GCATTGA TTTCTACAACAGCTA TERM 4568 2939591 - 2939577 - H 74 -5.8 -4.59342 | CTTATCATAAACAAA CATTAT GGG ATAATG ATGAGAAGAATATGT TERM 4569 2940068 - 2940056 - g 71 -3.3 -4.96848 | overlap 2940058 GCTTGTATACAAAAA CAGCG ATA CACCG CAGCAGCAAAGTGTC cssR 2939688 - 2940365 + | response regulator TERM 4570 2940698 - 2940671 - g 70 -2.7 -5.00616 | TCCTTTGTGAAAAAA CAAAAAAGCGC AACGAA ACGCTATTCTG AAGAGGTGAACGGCC TERM 4571 2941459 - 2941449 - g 71 -4 -4.78661 | ACGCAAAAAGTAAAA TTGA CAT TCAA ATGAAACAGGAAGAG cssS 2940362 - 2941693 + | sensor histidine kinase TERM 4572 2941686 - 2941709 + T 75 -4.6 -5.09895 | gap 1 CGGTTCCAAAGAAGA GACTGTAGGTT TTT GACC-GCAGTC TTTTTTAGATGAATG BPUM_2955 2941878 - 2941714 - | hypothetical protein BPUM_2956 2942071 - 2942949 + | TetR family transcriptional regulator TERM 4573 2942947 - 2942974 + T 100 -15.8 -5.08601 | opp_overlap 2942952, overlap 2942952 AAAGAGGATCATTTG TAAAACCCAAGG CATT CCTTGGGTTTTA TTTTTATTCACATCA TERM 4574 2942969 - 2942952 - T 86 -11.3 -4.12188 | opp_overlap 2942947 2942952 GGATCATTTGTAAAA CCCAAGG CATT CCTTGGG TTTTATTTTTATTCA TERM 4575 2942952 - 2942969 + T 100 -11.3 -5.42605 | opp_overlap 2942952, overlap 2942947 GGATCATTTGTAAAA CCCAAGG CATT CCTTGGG TTTTATTTTTATTCA TERM 4576 2943024 - 2943005 - T 100 -11.4 -5.28481 | opp_overlap 2943005 CATTCAATGAAAAAA CCAGAGGC AAAC GCCCCTGG TTTCTTATTTTGCTT TERM 4577 2943005 - 2943024 + T 90 -9.2 -4.71463 | opp_overlap 2943005 CATTCAATGAAAAAA CCAGAGGC AAAC GCCCCTGG TTTCTTATTTTGCTT fumC 2944423 - 2943029 - | fumarate hydratase BPUM_2958 2944680 - 2944513 - | hypothetical protein gerAA 2944795 - 2946219 + | spore germination protein AA TERM 4578 2946980 - 2946998 + G 73 -3.8 -5.06414 | overlap 2946968 2946976 2946981 ATTGCCTTGTTTCAA GCCTTTGA TAT TCAAGGGG TTTTTATTGAACGAA gerAB 2946206 - 2947300 + | spore germination protein AB gerAC 2947297 - 2948418 + | spore germination protein AC BPUM_2962 2948456 - 2948824 + | hypothetical protein TERM 4579 2948842 - 2948861 + T 100 -10.8 -6.17669 | TTACGCATGTTCTAG CAGCTTTC TTTT GAAAGCTG TTTTTTTATTTTATT BPUM_2963 2949507 - 2948872 - | response regulator BPUM_2964 2950568 - 2949504 - | sensor histidine kinase BPUM_2965 2951290 - 2950565 - | hypothetical protein BPUM_2966 2952229 - 2951360 - | hypothetical protein TERM 4580 2952332 - 2952290 - R 71 -4.3 -4.73432 | opp_overlap 2952297, overlap 2952295 2952297 CGAAACAGAAAGAAA TCAAATATCGGAAGAAAAA TCCTG CTTTTCTTCCGATTTGTCA TTGATTTCTTAGTTT TERM 4581 2952327 - 2952295 - R 83 -8.6 -4.29621 | opp_overlap 2952297, overlap 2952290 2952297 CAGAAAGAAATCAAA TATCGGAAGAAAAA TCCTG CTTTTCTTCCGATT TGTCATTGATTTCTT TERM 4582 2952325 - 2952297 - R 84 -11.2 -3.72091 | opp_overlap 2952297, overlap 2952295 2952290 GAAAGAAATCAAATA TCGGAAGAAAAA TCCTG CTTTTCTTCCGA TTTGTCATTGATTTC TERM 4583 2952297 - 2952325 + r 85 -10.5 -4.11938 | opp_overlap 2952297 2952295 2952290 GAAAGAAATCAAATA TCGGAAGAAAA ATCCTGC TTTTCTTCCGA TTTGTCATTGATTTC BPUM_2967 2953006 - 2952341 - | bacteriophage shock protein A BPUM_2968 2953414 - 2953022 - | hypothetical protein TERM 4584 2953573 - 2953551 - R 100 -12.1 -5.5074 | opp_overlap 2953547 GAATCCAATAAAAAA GCACTCTTC AATGA GAAGAGTGC TCAGATTGTTGACAA TERM 4585 2953584 - 2953622 + r 79 -9 -4.18506 | opp_overlap 2953590, overlap 2953590 AGTGCTCAGATTGTT GACAATGCGCTAAAATGA TCT TGATTTTAGCCCTTTGTC TTCTTTTCAGCGTGA BPUM_2969 2954318 - 2953749 - | cob(I)yrinic acid a,c-diamide adenosyltransferase BPUM_2970 2954367 - 2954489 + | hypothetical protein BPUM_2971 2954508 - 2955254 + | 3-oxoacyl-[acyl-carrier-protein] reductase TERM 4586 2955281 - 2955262 - T 93 -5 -5.71983 | opp_overlap 2955256 2955262, overlap 2955254 TGAACTAGAAAAAAA GAGCCT CCACTTAC AGGCTC TTTTTCTTTTCAAAT TERM 4587 2955262 - 2955281 + T 82 -5 -5.46706 | opp_overlap 2955262 2955254, overlap 2955256 TGAACTAGAAAAAAA GAGCCT CCACTTAC AGGCTC TTTTTCTTTTCAAAT pdxA 2956297 - 2955272 - | 4-hydroxythreonine-4-phosphate dehydrogenase BPUM_2973 2957616 - 2956273 - | hypothetical protein TERM 4588 2956319 - 2956348 + g 74 -8.1 -3.91506 | gap 1 TCCCCCTCTATGTTT TTCAGTACTTCTAT CGC ATGG-AGTACTGAA TCTTTTTGACCGTAA TERM 4589 2956787 - 2956801 + g 77 -5 -5.04249 | opp_overlap 2956791, overlap 2956791 TGTGTTTCCCTTACA TAAGCA AAC TGCTTG TTTGTTTTTTGAGAG TERM 4590 2956791 - 2956805 + g 74 -4.3 -5.00616 | opp_overlap 2956791, overlap 2956787 TTTCCCTTACATAAG CAAAC TGCTT GTTTG TTTTTTGAGAGGCAC TERM 4591 2956860 - 2956873 + g 75 -2.4 -5.40072 | overlap 2956860 TATGTTTTTTAAGTT GAGA AGCCTC TCTC TTTTTTTCGACAGAA BPUM_2974 2959423 - 2957642 - | transcriptional regulator TERM 4592 2957673 - 2957689 + g 70 -9.5 -2.79518 | opp_overlap 2957687, overlap 2957672 2957687 CTCCATAGCGTTGTA CGGTTAA TAT TTAACCG CTTTGCCGCTTTTGA BPUM_2975 2960745 - 2959570 - | hypothetical protein BPUM_2976 2962148 - 2960742 - | SSS family solute/sodium (Na+) symporter TERM 4593 2961943 - 2961962 + g 72 -7.2 -3.91911 | opp_overlap 2961937, overlap 2961937 TGCTTAAAGGCGGAT TCTGCTGT TCCA ACAGTAGA TTTCGTTCCAATGAA BPUM_2977 2963394 - 2962222 - | alcohol dehydrogenase dapA3 2964301 - 2963402 - | dihydrodipicolinate synthase TERM 4594 2964486 - 2964468 - R 100 -7.4 -5.7946 | opp_overlap 2964468 2964482 TTTTCAACAAAAAAA GCGAACCA TTT CGGTTCAC TTTTGAATGACTTTC BPUM_2979 2965766 - 2964483 - | iron ABC transporter ATP-binding protein BPUM_2980 2966821 - 2965763 - | iron ABC transporter membrane protein TERM 4595 2966737 - 2966697 - GR 100 -12 -3.7697 | gap 1 ATACGGAGAATAGAA GGAATGGGAATC-CCTAAG CTTC CAAAGGAGATTCCCATTCC AATGCTCACCACAAG BPUM_2981 2967737 - 2966787 - | iron ABC transporter binding protein TERM 4596 2967765 - 2967786 + r 72 -5.9 -4.40732 | TGATTTATGTACTGC TTGACGAAA TCTC TTCCGTCAA TTCTTTTCTAATTTC BPUM_2982 2967906 - 2967814 - | hypothetical protein TERM 4597 2967898 - 2967881 - G 93 -4.1 -5.86976 | overlap 2967874 TGATAAAAGAAAAAA CAGCCTC TAAA AAGACTG TTTTTCACATCATCT BPUM_2983 2969303 - 2967912 - | glycoside hydrolase uxaA 2970817 - 2969324 - | mannonate dehydratase uxaB 2972271 - 2970814 - | altronate oxidoreductase TERM 4598 2972323 - 2972340 + r 79 -6.9 -4.67755 | opp_overlap 2972323, overlap 2972305 CATTTTTCTTAAAAA GGTGCTG ATTA CTGCACC TTTTTGACTGAATCT TERM 4599 2972340 - 2972323 - R 79 -6.9 -4.57073 | opp_overlap 2972305 2972323 CATTTTTCTTAAAAA GGTGCTG ATTA CTGCACC TTTTTGACTGAATCT BPUM_2986 2973341 - 2972331 - | LacI family transcriptional regulator TERM 4600 2972370 - 2972383 + g 77 -3.9 -5.13473 | TCTGATCATGAGCTC TGTAT GGAC ATACA TTTTTTCCATATGAT uxaC 2974846 - 2973410 - | glucuronate isomerase TERM 4601 2973524 - 2973535 + g 70 -3.6 -4.83615 | overlap 2973501 CAGCTCTAGGTCATA GGGG ACTT CTCC TTTTTCTACCCAATC TERM 4602 2974378 - 2974392 + g 73 -8.6 -3.65084 | AATCGATTGGATCAT CTGTTG TCA CAACAG TTTCAACGTTTGATT TERM 4603 2974950 - 2974974 + r 72 -2.2 -5.19916 | gap 1, opp_overlap 2974950 2974953, overlap 2974953 TAAAACAGGAAAAAA CGA-TCTCCTT CAGA AAGGAAAATCG TTTTTTGGCTATTTT TERM 4604 2974974 - 2974950 - R 81 -4.4 -5.36314 | gap 1, opp_overlap 2974950 2974953, overlap 2974953 TAAAACAGGAAAAAA CGATC-TCCTT CAGA AAGGAAAATCG TTTTTTGGCTATTTT BPUM_2988 2976737 - 2974983 - | sensor histidine kinase TERM 4605 2975208 - 2975218 + g 70 -5.4 -4.46742 | TCCGTTGTCTTTCAT TTCG ATC CGAA TTTCTTCATTTGTTT TERM 4606 2975405 - 2975389 - G 70 -3.7 -4.86033 | AAATCCTCAGAAAAA GAGCTTC TTG AAAACTC GTCCATAATAGAGGC BPUM_2989 2977463 - 2976741 - | response regulator TERM 4607 2977624 - 2977607 - R 85 -4.8 -5.51402 | opp_overlap 2977607 AGAGACGCAAAAAAA CTCGGC TATTCC ACCGAG TTCCTTTTACTTCTA fhuC 2978455 - 2977640 - | ferrichrome ABC transporter fhuG 2979497 - 2978475 - | ferrichrome ABC transporter membrane protein TERM 4608 2979375 - 2979402 + g 70 -7.8 -3.62096 | TGTTTTCAATGTATC TATCGGAGAAAT ACGA ATTTCCCCGGTA TTTAAACTAATCAAA fhuB 2980550 - 2979498 - | ferrichrome ABC transporter membrane protein TERM 4609 2979974 - 2979960 - G 70 -5.7 -4.25104 | GCCTGCGTACCAAAA GCTCA TGTCC TGAGC GACGTCAAACCGAAT BPUM_2993 2980702 - 2980625 - | hypothetical protein TERM 4610 2980651 - 2980661 + g 81 -4 -5.26247 | CCTTTTTGAAATCAT TGTT CTG AACA TTTTCTTTATTTTCA BPUM_2994 2980810 - 2981748 + | ferrichrome ABC transporter TERM 4611 2981754 - 2981777 + T 100 -14 -3.8579 | opp_overlap 2981754 TGCATCATAAAAAAA CGTTTCTCCA AATG TGGAGAAACG TTTCCCTTATTCCGT TERM 4612 2981777 - 2981754 - T 100 -14 -5.67063 | opp_overlap 2981754 TGCATCATAAAAAAA CGTTTCTCCA AATG TGGAGAAACG TTTCCCTTATTCCGT BPUM_2995 2983190 - 2981784 - | APC family amino acid-polyamine-organocation transporter TERM 4613 2982140 - 2982162 + g 71 -4.3 -4.86385 | gap 1, opp_overlap 2982140 TTGTAACCGTTAAAG CAAAAACAGG ACTG CCT-TTTTTG TTTGTTTTTGCAAAT TERM 4614 2983358 - 2983339 - R 100 -4.2 -6.12328 | AGAACATAAAAAAAA GCCTGAAC AACA GTCCATGC TTTTCAAAACATACA BPUM_2996 2983522 - 2983322 - | hypothetical protein TERM 4615 2983476 - 2983487 + g 80 -3.6 -5.32882 | CTCTCTATACACTTC GGCG CTGA TGCC TTTTTTCTCATGATC TERM 4616 2983670 - 2983647 - R 100 -12.5 -5.186 | opp_overlap 2983641 2983638 TAAAACATAGAAAAA GGGCAGAGA TGCTTT TCTCTGCCC TATACCTGCTTATTG sspJ 2983823 - 2983680 - | small acid-soluble spore protein J BPUM_2998 2984334 - 2983906 - | MarR family transcriptional regulator BPUM_2999 2984526 - 2984380 - | hypothetical protein BPUM_3000 2984507 - 2985007 + | hypothetical protein BPUM_3001 2985124 - 2986974 + | sulfatase TERM 4617 2987012 - 2987027 + F 100 -8.2 -5.60556 | opp_overlap 2987006 2987012 GTCATCACACTGAAA GTCGCC ATCA GGCGGC TTTTTCTTTTCTCTT BPUM_3002 2987108 - 2987902 + | molybdenum ABC transporter ATP-binding protein TERM 4618 2988078 - 2988093 + G 75 -3.2 -5.15167 | overlap 2988079 GCCACTCGTTCTCCC ACCAAC AGTC GTTGGC TTTTTATTGCTCGTC BPUM_3003 2987902 - 2988564 + | molybdenum ABC transporter membrane protein TERM 4619 2988570 - 2988595 + T 100 -10.5 -6.08342 | opp_overlap 2988570 AAATAAATAAAAAAA TCCCCTTTCTC ACAT GAGAAAGAGGA TTTTTTTATTTATTC TERM 4620 2988595 - 2988570 - T 100 -12.7 -6.11392 | opp_overlap 2988570 AAATAAATAAAAAAA TCCCCTTTCTC ACAT GAGAAAGAGGA TTTTTTTATTTATTC BPUM_3004 2989450 - 2988605 - | aldo/keto reductase BPUM_3005 2990389 - 2989520 - | ROK family protein TERM 4621 2990223 - 2990181 - G 73 -8.5 -3.70081 | opp_overlap 2990174, overlap 2990213 ATATAACCGTAAGAA GGGTCGTC-CTTTTGGACACA GAT CG-GTCCAAAGGAGCCGACCC CTAATGCTTCAATGT BPUM_3006 2992468 - 2990453 - | CPA1 family monovalent cation:proton (H+) antiporter-1 TERM 4622 2990740 - 2990754 + g 75 -5.6 -4.6635 | opp_overlap 2990740 2990742, overlap 2990742 2990752 GCTTGATCGAGTCAA CAGCAG CCT CTGCCG TTTTCTTACGGATTT TERM 4623 2991197 - 2991214 + g 91 -8.5 -4.68607 | CTGAATTTTTGTATC CAAATCG ACAG CGATTTG TTTGTCTTTTTTCTC TERM 4624 2992645 - 2992624 - R 82 -5.2 -5.47821 | ATCTAGGCAAAAAAA GACTGAAT CCACAT ATTCAGCC AACTGACAAAATTTT TERM 4625 2992786 - 2992753 - R 81 -9.7 -3.73224 | opp_overlap 2992758 2992763, overlap 2992755 2992763 CCAGCTCGTATTAAA CACAAAAAAAGAGCG AAAT CGCTCTTTTCTCGTT TTACCCTTTATTTAA TERM 4626 2992784 - 2992755 - R 90 -12.3 -3.45027 | opp_overlap 2992758 2992763, overlap 2992753 2992763 AGCTCGTATTAAACA CAAAAAAAGAGCG AAAT CGCTCTTTTCTCG TTTTACCCTTTATTT TERM 4627 2992776 - 2992763 - R 100 -8.1 -5.88197 | opp_overlap 2992758 2992763, overlap 2992755 2992753 TTAAACACAAAAAAA GAGCG AAAT CGCTC TTTTCTCGTTTTACC TERM 4628 2992763 - 2992776 + r 86 -8.1 -4.67635 | opp_overlap 2992763 2992755 2992753, overlap 2992758 TTAAACACAAAAAAA GAGCG AAAT CGCTC TTTTCTCGTTTTACC BPUM_3007 2993398 - 2992787 - | hypothetical protein TERM 4629 2993540 - 2993519 - R 100 -8.7 -5.93252 | opp_overlap 2993519 2993520, overlap 2993521 TGCAAAAATAAAAAA CAGCCTGCT AAAA AGCAGGCCA TCTCTTAATCTTCTT TERM 4630 2993538 - 2993521 - R 90 -11.3 -4.585 | opp_overlap 2993520 2993519, overlap 2993519 CAAAAATAAAAAACA GCCTGCT AAAA AGCAGGC CATCTCTTAATCTTC bdbC 2993958 - 2993545 - | disulfide dehydrogenase C TERM 4631 2993852 - 2993835 - G 79 -7.7 -4.34402 | GCGGGTACATGAAAA TGCGCTG GAAC CAGCACA TATCGCATGGAATAA bdbD 2994641 - 2993955 - | disulfide dehydrogenase D TERM 4632 2994095 - 2994115 + g 70 -2.6 -4.9448 | gap 1, overlap 2994096 2994098 CAAGCTGATTGTCTG TGT-TCAGC TGCG GCTGATACG TTTTCTTTGATAAAT TERM 4633 2994239 - 2994258 + g 73 -2.9 -5.17054 | gap 1, overlap 2994252 GTGCTTGATAGACAG CTTCATGG AATGC CCA-GAAG TTTTTTGGATCTTCT TERM 4634 2994716 - 2994687 - R 89 -5.8 -5.54907 | TTTACAAAAGAAAAA GGATAATAGCTT AGAAGA ATGCCATTATCC AACTTCTTCTATTTT BPUM_3010 2996885 - 2994786 - | P-ATPase superfamily P-type ATPase metal transporter TERM 4635 2997210 - 2997195 - H 100 -7.6 -5.31091 | TAGAATAAAATAAAA GTTTCC CTAA GGAAAC AAATTAGCGTTAGAG mntB 2997311 - 2998054 + | metal cation ABC transporter ATP-binding protein TERM 4636 2998224 - 2998241 + G 82 -2.1 -5.63517 | gap 1 AGGTGTCGCCATCTC TTATATGC TAG GCAT-TAA TTTTTTCTTTGGAGC TERM 4637 2998365 - 2998383 + G 75 -6 -4.59853 | overlap 2998358 CGCTTTTTTCTCAAT TGGGATCA TTT TGATCACA TTTTTGAAAAGTTCC mntD 2998054 - 2998926 + | metal cation ABC transporter membrane protein TERM 4638 2999061 - 2999051 - g 74 -6.8 -4.35116 | GACGGCACATTAAAA GTCG TCA CGAC CTACTCCATTCTTTA TERM 4639 2999509 - 2999493 - g 70 -7.3 -3.8374 | overlap 2999494 TCAAAAAACTTCAAA CGCTTCA TAA TGAAGCA AAAGACAAGTTCGAT TERM 4640 2999557 - 2999546 - g 82 -2.2 -5.63645 | CCAAAAGATAAAAAA CGTC TTGT GACA AGTGAGGGAGCCTTC mntA 2998940 - 2999878 + | metal cation ABC transporter ATP-binding protein TERM 4641 2999884 - 2999904 + T 100 -14.1 -5.8187 | opp_overlap 2999884 TTCATCATAAAAAAA CAGGCGAAA TGA TTTCGCCTG TTTTTTTATTAGCTG TERM 4642 2999904 - 2999884 - T 100 -14.1 -5.67063 | opp_overlap 2999884 TTCATCATAAAAAAA CAGGCGAAA TGA TTTCGCCTG TTTTTTTATTAGCTG BPUM_3014 3000461 - 2999913 - | hypothetical protein TERM 4643 3000520 - 3000505 - H 100 -6.2 -5.68438 | GTATTAAATAAAAAA TAACAC AACT GTGTTA AAAAAACAATAGCTG TERM 4644 3000540 - 3000530 - H 74 -5.4 -4.79949 | GTGTTAAAAAAACAA TAGC TGT GCTA AAATCAATGTATGCC pksA 3000551 - 3001159 + | transcriptional regulator TERM 4645 3001142 - 3001170 + T 100 -12.6 -5.27779 | gap 1, opp_overlap 3001142 TCCATCACCAAAAAA GACATGTCTCCCT CATA AGGGAG-CATGTC TTTTTTAATCTTCCA TERM 4646 3001170 - 3001142 - T 100 -12.6 -5.1861 | gap 1, opp_overlap 3001142 TCCATCACCAAAAAA GACATGTCTCCCT CATA AGGGAG-CATGTC TTTTTTAATCTTCCA BPUM_3016 3002107 - 3001175 - | response regulator BPUM_3017 3003420 - 3002104 - | sensor histidine kinase TERM 4647 3002311 - 3002301 - G 70 -5.4 -4.57341 | AACCGGGTTTAAAAA TCAC ATG GTGA TTGCGCTCTTTAATA TERM 4648 3002829 - 3002848 + g 71 -4.3 -4.80167 | opp_overlap 3002829 TATAAAGGTTAGACA GGAGCAT GAGCAG ATGTTCC TTTTCCTTTTTCATC TERM 4649 3002962 - 3002952 - G 79 -6.8 -4.67038 | TCGCTAAAACGAAAA GCTG AAA CAGC GTCCGCATCGTTAAA TERM 4650 3003521 - 3003493 - R 100 -13.2 -5.30686 | opp_overlap 3003493 AACATCCATAAAAAA GCGCACACCG GAACTTTGT CGGTGTGCGC TTCTCGTGATGCCGC TERM 4651 3003493 - 3003521 + r 100 -15.3 -3.44051 | opp_overlap 3003493 AACATCCATAAAAAA GCGCACACCGGAA CTT TGTCGGTGTGCGC TTCTCGTGATGCCGC ansB1 3004982 - 3003537 - | aspartate ammonia-lyase BPUM_3019 3006276 - 3004999 - | DAACS family dicarboxylate/amino acid:sodium or proton symporter TERM 4652 3005891 - 3005907 + g 73 -5.9 -4.4296 | overlap 3005897 GTTTCAGAGAAACTT GCTTTTT CGG AAGAAGC TTTTGATGTCTCTTC TERM 4653 3006452 - 3006431 - R 100 -8 -5.4477 | opp_overlap 3006440 3006445 AAATTGTTAAAAAAA GACTCCGC TTTTGG GCGAAGTC CTAATGATTTTGCAT BPUM_3020 3006587 - 3006453 - | hypothetical protein BPUM_3021 3009019 - 3006584 - | P-ATPase superfamily P-type ATPase heavy metal transporter TERM 4654 3008321 - 3008300 - G 70 -2.9 -5.06585 | TAAACTATAGAAAAA CGCAGCTGA TGTC CCAAGTGCG ACAAGAACATCCATG TERM 4655 3009092 - 3009070 - R 100 -7.7 -5.42862 | opp_overlap 3009069, overlap 3009072 ATATTTTGAAAAAAA TACGTGCTG TTATG CAGCACGTC AGATTGTTGACAAAG TERM 4656 3009090 - 3009072 - R 87 -10.3 -4.35085 | opp_overlap 3009069, overlap 3009070 ATTTTGAAAAAAATA CGTGCTG TTATG CAGCACG TCAGATTGTTGACAA TERM 4657 3009101 - 3009139 + r 100 -14.2 -4.18506 | opp_overlap 3009107 3009108, overlap 3009108 GCACGTCAGATTGTT GACAAAGTGCTAAAATGA TCT TGATTTTAGCATTTTGTC TTCTTTTCAGCGTGA TERM 4658 3009108 - 3009132 + r 83 -7.3 -4.88288 | opp_overlap 3009107 3009108, overlap 3009101 AGATTGTTGACAAAG TGCTAAAATGA TCT TGATTTTAGCA TTTTGTCTTCTTTTC TERM 4659 3009266 - 3009288 + r 70 -8.4 -3.33151 | overlap 3009260 3009259 3009264 3009268 GTTTATCTACACGCT GACGTGCTGT TAT GCAGCACGTA TGTTCATTTAAACGA TERM 4660 3009268 - 3009286 + r 82 -11 -3.2313 | overlap 3009260 3009259 3009266 3009264 TTATCTACACGCTGA CGTGCTGT TAT GCAGCACG TATGTTCATTTAAAC merP 3009502 - 3009296 - | MerTP family mercury (Hg2+) permease, binding protein MerP BPUM_3023 3009880 - 3009575 - | hypothetical protein TERM 4661 3009957 - 3009926 - R 79 -8.1 -4.08485 | TTTACCTAAATTAAA GCATATCTCCACC GAAAAA GGCAAAGATATGC TAAATATACTCTATC BPUM_3024 3010437 - 3009982 - | hypothetical protein TERM 4662 3010147 - 3010164 + g 70 -7.7 -3.60884 | opp_overlap 3010149, overlap 3010158 CTCATTTTTTTCAAT GATCTGC GCAT GCAGGTC TTCTGCTATTTTAGG BPUM_3025 3010596 - 3010444 - | hypothetical protein TERM 4663 3010519 - 3010566 + g 72 -10 -2.82895 | opp_overlap 3010521, overlap 3010518 3010515 CAAAAAGACCTTAAA AATAGCCAGACCTTTGCC CCATGTGTGATA GGCAAAGGTCTGGCTAAC ATTGTTCATGCCGGA TERM 4664 3010564 - 3010521 - G 100 -18.5 -4.69464 | gap 1, opp_overlap 3010519 3010518 3010515 AAAAGACCTTAAAAA TAGCCAGACCTTTGCCCCAT GTGTG ATAG-GCAAAGGTCTGGCTA ACATTGTTCATGCCG BPUM_3026 3012305 - 3010716 - | diguanylate cyclase BPUM_3027 3012550 - 3012789 + | hypothetical protein TERM 4665 3012827 - 3012793 - T 86 -10.9 -3.91364 | opp_overlap 3012793 3012796, overlap 3012796 AAACGTACATAATAA GAACCAGAGATTGCA TGAAC TAGAATCTCTGGTTC TGCTGTGCGCCAAGT TERM 4666 3012824 - 3012796 - T 71 -6.8 -4.06864 | opp_overlap 3012796 3012793, overlap 3012793 CGTACATAATAAGAA CCAGAGATTGCA TGAAC TAGAATCTCTGG TTCTGCTGTGCGCCA BPUM_3028 3013478 - 3012927 - | hypothetical protein BPUM_3029 3014188 - 3015018 + | hypothetical protein TERM 4667 3015096 - 3015062 - T 82 -5.1 -5.37593 | gap 1 CCGCAAATTAAAAAA GTGCCCAAACCCATTA TAAA TAACGGTCTTG-GCAC TTTTTTTTCATATGG smpB 3016113 - 3015643 - | SsrA-binding protein TERM 4668 3016199 - 3016256 + r 100 -12.3 -5.61881 | gap 1, opp_overlap 3016215, overlap 3016203 TTCGACAATAATGAC GCTATGTGGTCAAAAAGCAAATAGAGCG TGA TGCCCTATTTGCTTTTTG-TCACATTAC TTTTTCTTTTTACGC TERM 4669 3016203 - 3016252 + r 100 -16.1 -4.0464 | gap 1, opp_overlap 3016215, overlap 3016199 ACAATAATGACGCTA TGTGGTCAAAAAGCAAATAGAGCG TGA TGCCCTATTTGCTTTTTG-TCACA TTACTTTTTCTTTTT TERM 4670 3016241 - 3016215 - R 100 -11.7 -4.57569 | opp_overlap 3016203 3016199 CTATGTGGTCAAAAA GCAAATAGAGC GTGAT GCCCTATTTGC TTTTTGTCACATTAC rnr 3018595 - 3016253 - | ribonuclease R bioH 3019361 - 3018615 - | carboxylesterase TERM 4671 3019449 - 3019469 + rH 70 -6.9 -3.71284 | opp_overlap 3019449 3019441, overlap 3019464 CTGATAATAAAAAAA GGTCTGA AAAAAGA TCAGACC TTCTGTTACTCGCGC TERM 4672 3019469 - 3019449 - RH 100 -6.9 -5.88565 | opp_overlap 3019449 3019464, overlap 3019441 CTGATAATAAAAAAA GGTCTGA AAAAAGA TCAGACC TTCTGTTACTCGCGC secG 3019719 - 3019486 - | preprotein translocase subunit SecG TERM 4673 3019558 - 3019542 - GH 70 -5.1 -4.45517 | overlap 3019545 AAAGCACTGACAAAA TAACCGT TAA ACGGTGA AGTATCAAGTCAAGA TERM 4674 3019555 - 3019545 - GH 74 -6.8 -4.33182 | overlap 3019542 GCACTGACAAAATAA CCGT TAA ACGG TGAAGTATCAAGTCA BPUM_3034 3019714 - 3019932 + | hypothetical protein abhA 3020196 - 3019906 - | transcriptional regulator yvzC 3020456 - 3020223 - | transcriptional regulator BPUM_3037 3020610 - 3021014 + | transcriptional regulator BPUM_3038 3021145 - 3021543 + | hypothetical protein BPUM_3039 3021626 - 3021946 + | hypothetical protein TERM 4675 3022011 - 3021981 - T 100 -15.6 -4.4009 | opp_overlap 3021984, overlap 3021984 CCTGATCTCATAAAA CAACCTCCCTTACA GAT TGTAAGGGAGGTTT TATCTTTTCAACCGC TERM 4676 3021984 - 3022008 + T 100 -17.3 -4.89567 | opp_overlap 3021981 3021984 GATCTCATAAAACAA CCTCCCTTACA GAT TGTAAGGGAGG TTTTATCTTTTCAAC TERM 4677 3022008 - 3021984 - T 100 -17.3 -4.32067 | opp_overlap 3021984, overlap 3021981 GATCTCATAAAACAA CCTCCCTTACA GAT TGTAAGGGAGG TTTTATCTTTTCAAC opuCD 3022716 - 3022027 - | glycine betaine/carnitine/choline ABC transporter membrane protein opuCC 3023655 - 3022738 - | glycine betaine/carnitine/choline ABC transporter binding protein opuCB 3024322 - 3023669 - | glycine betaine/carnitine/choline ABC transporter membrane protein opuCA 3025484 - 3024336 - | glycine betaine/carnitine/choline ABC transporter ATP-binding protein TERM 4678 3025776 - 3025766 - g 71 -8.2 -3.45118 | GGAGTGGACAAGCAA GCGC TAG GCGC CATTCAAAAAGCACA TERM 4679 3026132 - 3026115 - g 71 -4.1 -4.86822 | overlap 3026102 3026117 AAGCACATAAGAAAA CGTGCAA GGAA TTGCAAG AGCTGCTTGAACAGG BPUM_3044 3025754 - 3026290 + | transcriptional regulator TERM 4680 3026296 - 3026331 + T 100 -11.4 -5.37043 | opp_overlap 3026296 GAAACCTTAAAAAAA GCTGTTTTATTTTACA TCAT TGTAGAAAAAAACAGC TTTTTTATATACACT TERM 4681 3026331 - 3026296 - T 100 -9.2 -5.49809 | opp_overlap 3026296 GAAACCTTAAAAAAA GCTGTTTTATTTTACA TCAT TGTAGAAAAAAACAGC TTTTTTATATACACT BPUM_3045 3026978 - 3026346 - | hypothetical protein BPUM_3046 3027096 - 3027560 + | hypothetical protein yvbK 3027576 - 3028040 + | GNAT family acetyltransferase TERM 4682 3028032 - 3028054 + T 100 -7.7 -5.70829 | opp_overlap 3028035 3028037 TCGCTCACATTTCAA GCAGACTGA TTTTT TCAGCCTGC TTTTTTTATGCTCTT BPUM_3048 3028341 - 3028060 - | hypothetical protein BPUM_3049 3028706 - 3028338 - | hypothetical protein TERM 4683 3028463 - 3028437 - G 100 -3.6 -5.99154 | opp_overlap 3028439, overlap 3028439 CAGTAAAGAAAAAAA TAGCAGCTGATG ACT CATCGGATGCTT CCATATCAAAAAAAG TERM 4684 3028461 - 3028439 - G 77 -6.2 -4.61687 | opp_overlap 3028439, overlap 3028437 GTAAAGAAAAAAATA GCAGCTGATG ACT CATCGGATGC TTCCATATCAAAAAA BPUM_3050 3030100 - 3028703 - | hypothetical protein BPUM_3051 3030839 - 3030072 - | ABC transporter ATP-binding protein BPUM_3052 3031167 - 3030898 - | hypothetical protein TERM 4685 3031413 - 3031377 - R 100 -13.1 -5.96521 | gap 1, opp_overlap 3031376 ATCAACCAAAAAAAA CGCTGCGC-CCACTCT AATATA AGAGCGGAACGCAGCG CGTTGCTGGCATTAT eno 3032717 - 3031425 - | phosphopyruvate hydratase TERM 4686 3032017 - 3032033 + g 73 -5.1 -4.68424 | overlap 3032018 AGTTTCACTTCTTCA CCTGGTT TGA AACCAGC TTTTTCAATCGCTTC gpmI 3034282 - 3032747 - | phosphoglyceromutase tpiA 3035036 - 3034275 - | triosephosphate isomerase TERM 4687 3034677 - 3034700 + g 82 -3.2 -5.49234 | gap 1, overlap 3034679 GATAATTGGAACGAT GC-CATGCT TGAATGC AGCATGTGC TTTTTTGTTCACTGT pgk 3036251 - 3035067 - | phosphoglycerate kinase TERM 4688 3036260 - 3036270 + r 75 -6.8 -4.4281 | TATTCATGCTCGTCA GGAG ATC CTCC TTTATTCTGGTTTCC TERM 4689 3036406 - 3036371 - R 100 -13.4 -3.61603 | opp_overlap 3036369 3036377, overlap 3036377 ACGGATAAAAACAGA GAAAAAGGGAAAGGGA TGCT TCCCCTTCCCTTGTCC GTCTTCATTATATCG TERM 4690 3036377 - 3036400 + r 83 -11 -3.43618 | opp_overlap 3036377 3036371, overlap 3036369 AAAAACAGAGAAAAA GGGAAAGGGA TGCT TCCCCTTCCC TTGTCCGTCTTCATT TERM 4691 3036400 - 3036377 - R 100 -13.2 -5.20633 | opp_overlap 3036369 3036377, overlap 3036371 AAAAACAGAGAAAAA GGGAAAGGGA TGCT TCCCCTTCCC TTGTCCGTCTTCATT gapA 3037472 - 3036465 - | glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) cggR 3038541 - 3037504 - | transcriptional regulator TERM 4692 3038022 - 3038044 + g 75 -5.6 -4.62069 | opp_overlap 3038012 CAAGACCGCCTCTTG CAGGGACA AACATCA TGTCTCTG TTTTTAGCATCAGGG TERM 4693 3038384 - 3038374 - G 70 -5.4 -4.56597 | opp_overlap 3038365, overlap 3038376 TTGCTCTTTTAAAAA CTGA ACT TCAG CTCTTAAGATGCGTT TERM 4694 3038591 - 3038579 - R 71 -3.3 -5.14563 | CGTTGGACTAAAAAA GTCCC ACT GTGAC AAAAAACGTCCCGCC TERM 4695 3038835 - 3038805 - R 75 -8.3 -3.76968 | opp_overlap 3038806, overlap 3038806 AATTCATCCATGAAA GTGTGCATGCGTA AGAGG TCCGCATGCACAT TTTTTGTATAGTCGG TERM 4696 3038834 - 3038806 - R 81 -11.8 -2.85699 | opp_overlap 3038806, overlap 3038805 ATTCATCCATGAAAG TGTGCATGCGTA AGAGG TCCGCATGCACA TTTTTTGTATAGTCG TERM 4697 3038806 - 3038834 + r 100 -11.8 -5.39721 | opp_overlap 3038806 3038805 ATTCATCCATGAAAG TGTGCATGCGTA AGAGG TCCGCATGCACA TTTTTTGTATAGTCG rocC 3040270 - 3038855 - | APC family amino acid-polyamine-organocation transporter TERM 4698 3040366 - 3040344 - R 86 -7.7 -4.85782 | TTGTTGAAAAAGAAA GGGAGAAAG TGAAG CCTCCTCCC CCTTTGCCATTTAAG rocD 3041570 - 3040377 - | ornithine--oxo-acid transaminase TERM 4699 3042493 - 3042509 + G 76 -8 -4.1899 | CTTATTTGAGCAGGC GCAAGG AGGAA CCTTGC TTTTAGATGAGATCA TERM 4700 3043136 - 3043105 - g 70 -7.4 -3.81349 | opp_overlap 3043107, overlap 3043103 3043107 ATTCGAAAAACAATA CATCGTCCATTACT TAGA AAAAATGGACGATA ATATTTCACAGACTG BPUM_3061 3041780 - 3043222 + | transcriptional regulator TERM 4701 3043251 - 3043225 - T 74 -8.7 -3.38812 | opp_overlap 3043227 3043244, overlap 3043223 3043227 TTCTCGTCAATAAGA GAGCTGTGCCA TCATT CGGCACAGCTT ATTGTGTATCTGACT TERM 4702 3043227 - 3043249 + T 85 -10.6 -3.95183 | opp_overlap 3043225 3043223 3043227, overlap 3043244 CTCGTCAATAAGAGA GCTGTGCC ATCATTC GGCACAGC TTATTGTGTATCTGA TERM 4703 3043249 - 3043227 - T 82 -11.3 -3.26444 | opp_overlap 3043227 3043244, overlap 3043225 3043223 CTCGTCAATAAGAGA GCTGTGCCA TCATT CGGCACAGC TTATTGTGTATCTGA BPUM_3062 3043987 - 3043250 - | GntR family transcriptional regulator TERM 4704 3043769 - 3043739 - G 71 -3.3 -5.06016 | gap 1, opp_overlap 3043747 AGGAGATAAAGAAAA TGCG-AGCTGTTCA GGAT CGAACTGCTTCACA TATGTGCCTTCCCCT TERM 4705 3044152 - 3044127 - R 100 -7.6 -5.63103 | opp_overlap 3044127 3044130 TTCCAACTAAAAAAA GCACCTGCCA TGTTTC TGGCAAGTAC TTCATTTTAATCATA sigL 3045463 - 3044159 - | DNA-directed RNA polymerase sigma subunit SigL TERM 4706 3044489 - 3044506 + g 74 -7 -4.33927 | CAAGATATCTGCGAT CCGCTT CATCGT AAGCGG TTTCATTTTATGTTT TERM 4707 3044956 - 3044936 - G 84 -3.9 -5.56264 | overlap 3044938 TGCAAAGAGAAAAAA GTGCTCATC GAT GATCAGCTC GGCTTCGTACCAGCG TERM 4708 3045138 - 3045179 + g 73 -5.3 -4.59424 | gap 1, opp_overlap 3045132 TTTAAATAGCCGTTG GAATCAATGGACTCGATCAT AAA ATGAAAGA-TCCTTTGATTC TTTTCATTTAGATTT TERM 4709 3045625 - 3045613 - g 74 -4.9 -4.77629 | opp_overlap 3045613 AAAATGAAGACAAAA TTCAT GCG ATGAA TGCTTATTACCGCTC BPUM_3064 3045534 - 3045749 + | hypothetical protein TERM 4710 3045790 - 3045758 - T 70 -7.7 -3.70853 | opp_overlap 3045761, overlap 3045761 3045763 TGAATGATTGAATAA GCACACCCTTTGTCA TAA TGGCAAAGGGTGTTT TTCTTTTGCGAAAAG TERM 4711 3045787 - 3045761 - T 95 -13.8 -2.95139 | opp_overlap 3045761, overlap 3045758 3045763 ATGATTGAATAAGCA CACCCTTTGTCA TAA TGGCAAAGGGTG TTTTTCTTTTGCGAA TERM 4712 3045761 - 3045787 + T 100 -16 -5.45802 | opp_overlap 3045761 3045758 3045763 ATGATTGAATAAGCA CACCCTTTGTCA TAA TGGCAAAGGGTG TTTTTCTTTTGCGAA TERM 4713 3045785 - 3045763 - T 77 -10.6 -3.02459 | opp_overlap 3045761, overlap 3045761 3045758 GATTGAATAAGCACA CCCTTTGTCA TAA TGGCAAAGGG TGTTTTTCTTTTGCG BPUM_3065 3047095 - 3045770 - | MATE family multi antimicrobial extrusion protein TERM 4714 3047141 - 3047121 - R 72 -4.8 -4.72272 | gap 1, opp_overlap 3047122, overlap 3047123 GCCTTTCATGAAAAA TAGCCTCTT CTAA AAGAGGC-A TTGCTGAAATAAAGA TERM 4715 3047140 - 3047123 - R 83 -9.9 -3.98256 | opp_overlap 3047122, overlap 3047121 CTTTCATGAAAAATA GCCTCTT CTAA AAGAGGC ATTGCTGAAATAAAG BPUM_3066 3047973 - 3047158 - | oligopeptide ABC transporter ATP-binding protein appDB 3048829 - 3047987 - | oligopeptide ABC transporter ATP-binding protein appCB 3049640 - 3048807 - | oligopeptide ABC transporter membrane protein appBB 3050581 - 3049637 - | oligopeptide ABC transporter membrane protein appAB 3052222 - 3050600 - | oligopeptide ABC transporter substrate-binding protein BPUM_3071 3053553 - 3052372 - | pyridoxal-phosphate-dependent aminotransferase TERM 4716 3052579 - 3052560 - G 76 -9.2 -3.50722 | opp_overlap 3052563, overlap 3052558 GGCAATCACGAAAGA GCGGCTGC TGGT GCAGCGGC TTCCATACACGCCTT TERM 4717 3052563 - 3052579 + g 73 -10.1 -3.05715 | opp_overlap 3052560 3052558 AATCACGAAAGAGCG GCTGCTG GTG CAGCGGC TTCCATACACGCCTT BPUM_3072 3054239 - 3053550 - | hypothetical protein BPUM_3073 3054795 - 3054202 - | sugar transferase BPUM_3074 3056330 - 3054816 - | polysaccharide biosynthesis protein TERM 4718 3055962 - 3055940 - G 77 -4.8 -5.02323 | opp_overlap 3055940 TGAGCATAAATAAAA GACCCCCT AATATAA AGGCGGTC TGTGTATCCTTTGCG BPUM_3075 3057381 - 3056359 - | polysaccharide biosynthesis protein BPUM_3076 3058415 - 3057393 - | glycosyltransferase TERM 4719 3057719 - 3057705 - G 73 -5.6 -4.57837 | ATATTCTGTCAAAAA CAAGCG CTG CGCATG ATAAAAAGTGAGTCC BPUM_3077 3059546 - 3058443 - | hypothetical protein TERM 4720 3058659 - 3058634 - G 75 -8.4 -3.88583 | overlap 3058639 GAAATCTTGCATAAA TGACATCCTT TGTGGC AAGGATGCCA AACAAGAAACCGAGC TERM 4721 3059579 - 3059594 + r 72 -7.6 -3.82946 | CAGTCCATATCCATT CATCAC ACGT GTGATG TTCTGTTTGACATCA BPUM_3078 3060691 - 3059561 - | glycosyltransferase TERM 4722 3060163 - 3060148 - G 74 -4.7 -4.87803 | CAGGCTGAAAGAAAA GGGAT AAATCA ATCCC ATTCGGCAGCACCTC BPUM_3079 3061529 - 3060684 - | glycosyltransferase BPUM_3080 3062665 - 3061526 - | glycosyltransferase TERM 4723 3062100 - 3062114 + gr 75 -2.1 -5.34655 | gap 1 GAAAAGCCATGGACT GCA-CG AAGA CGCTGC TTTTCTTTTTCATTA BPUM_3081 3064505 - 3062631 - | capsular polysaccharide biosynthesis protein TERM 4724 3063331 - 3063348 + gr 82 -4.9 -5.252 | gap 1 TCAATGCCATGCTCA TGT-GCAG CTT CTGCGACA TTTTTTGTCCCGATA BPUM_3082 3065353 - 3064670 - | capsular polysaccharide biosynthesis protein TERM 4725 3065169 - 3065149 - G 78 -7.5 -4.56597 | TCTGCTGTGCAAAAA CAGCTGCTA GGT TTGCAGCCG TAAATGATTTCCCTT BPUM_3083 3066074 - 3065343 - | capsular polysaccharide biosynthesis protein TERM 4726 3065624 - 3065635 + g 93 -4.4 -5.77856 | AAACATTAATGCGAT CCAT ATTC ATGG TTTTTTTGATTTCTT TERM 4727 3066199 - 3066210 + H 81 -4.4 -5.34857 | opp_overlap 3066196 3066199, overlap 3066196 GTTCTTTTTAAAGAA CGAA ATCG TTCG TTTTCTTTTGTTTAC BPUM_3084 3066332 - 3066802 + | transcriptional regulator TERM 4728 3066849 - 3066890 + T 90 -11.8 -4.00262 | opp_overlap 3066858, overlap 3066858 GGCGTTTGACGCTTC GCTGAAAAAGAGCCTTTT ATCATG AAAAGGCTCTTTTTCCTC TTATTCTGCTTTTTT TERM 4729 3066881 - 3066858 - T 89 -9.7 -4.56597 | opp_overlap 3066849 3066858 CGCTTCGCTGAAAAA GAGCCTTTT ATCATG AAAAGGCTC TTTTTCCTCTTATTC TERM 4730 3066858 - 3066881 + T 93 -9.7 -4.93316 | opp_overlap 3066858, overlap 3066849 CGCTTCGCTGAAAAA GAGCCTTTT ATCATG AAAAGGCTC TTTTTCCTCTTATTC BPUM_3085 3067115 - 3066891 - | holin TERM 4731 3067246 - 3067214 - R 86 -5.6 -5.52986 | opp_overlap 3067216, overlap 3067216 ACCGGATCAAAAAAA GAGACATCATACCT ATATA AGGAATGATGCCTG ATTTCATCTTATTTT TERM 4732 3067244 - 3067216 - R 83 -8.2 -4.40552 | opp_overlap 3067216, overlap 3067214 CGGATCAAAAAAAGA GACATCATACCT ATATA AGGAATGATGCC TGATTTCATCTTATT BPUM_3086 3068157 - 3067255 - | ferrichrome ABC transporter BPUM_3087 3069179 - 3068178 - | ferrichrome ABC transporter membrane protein BPUM_3088 3070204 - 3069176 - | ferrichrome ABC transporter membrane protein TERM 4733 3069900 - 3069917 + g 73 -5.5 -4.57882 | TTGATGCCCAAAATC CCCGC ATCGGCCA GCGGG TTTCTTGTTATTCCC BPUM_3089 3070295 - 3070194 - | hypothetical protein BPUM_3090 3070514 - 3071923 + | polysaccharide deacetylase TERM 4734 3071932 - 3071909 - T 76 -8.8 -3.78034 | opp_overlap 3071910, overlap 3071910 GAGCGACATGAACAA GCCCCTGTGC AATA ACACAGGGGT TTTCTTTATGACTCC TERM 4735 3071931 - 3071910 - T 86 -12.3 -2.86338 | opp_overlap 3071910, overlap 3071909 AGCGACATGAACAAG CCCCTGTGC AATA ACACAGGGG TTTTCTTTATGACTC TERM 4736 3071910 - 3071931 + T 100 -11.6 -5.0065 | opp_overlap 3071910 3071909 AGCGACATGAACAAG CCCCTGTG CAATAA CACAGGGG TTTTCTTTATGACTC BPUM_3091 3073527 - 3071938 - | ABC transporter ATP-binding protein TERM 4737 3072834 - 3072854 + g 71 -4.7 -4.59773 | GCTTTTTTTGCTTAT TTGCATAGT AGG GCTTTGCAA TTTTTGGCCCTGAGG TERM 4738 3073558 - 3073534 - R 100 -15.1 -4.85129 | AGGAGACATGAAAAA GCCTCCCATTC TCA GAATAGGAGGC AAAATGGTGTACAAA BPUM_3092 3074600 - 3073830 - | ABC transporter ATP-binding protein TERM 4739 3073885 - 3073911 + g 70 -7.3 -3.77953 | opp_overlap 3073884 3073885 3073888, overlap 3073888 AATTTCAGCGTAAAT GGATGAACCGC ATCAA GCAGTTCATTC TTATTACATTCTTCC BPUM_3093 3075409 - 3074594 - | ABC transporter ATP-binding protein TERM 4740 3074718 - 3074739 + gr 73 -10.1 -2.50816 | overlap 3074717 AATATCTTCTCAGCT GGGCGATGC TCAA GCATCTCCC CTTGATGCATCACCA BPUM_3094 3076262 - 3075372 - | ABC transporter ATP-binding protein BPUM_3095 3077194 - 3076265 - | ABC transporter ATP-binding protein TERM 4741 3076878 - 3076868 - G 82 -6.8 -4.8269 | CACAATGATGAAAAA GAGC GCT GCTC CTGCAAGCTGCAATG BPUM_3096 3078841 - 3077210 - | ABC transporter ATP-binding protein TERM 4742 3078129 - 3078146 + g 70 -7.1 -3.89215 | TCCGGCATGACTTTC CATTTCA CTGT TGAAATG TTTGGCTTTCTCCCC TERM 4743 3078867 - 3078905 + r 95 -13.4 -3.09834 | opp_overlap 3078877, overlap 3078868 TCCGAATCCTGTATT ATCGTAATCATTACGATT TTT AATCGAAATGATTACGAA TTGAATAATAGCATA TERM 4744 3078868 - 3078882 + r 81 -7.2 -4.72986 | opp_overlap 3078877, overlap 3078867 CCGAATCCTGTATTA TCGTAA TCA TTACGA TTTTTAATCGAAATG TERM 4745 3078960 - 3078979 + r 84 -10.8 -3.84825 | opp_overlap 3078960 TTTTCATCAAAAAAA CAGACTCA TAAT TGAGTCTG TTTCGTCTGCATCCA TERM 4746 3078979 - 3078960 - R 100 -10.8 -5.52384 | opp_overlap 3078960 TTTTCATCAAAAAAA CAGACTCA TAAT TGAGTCTG TTTCGTCTGCATCCA BPUM_3097 3080134 - 3078965 - | glucuronosyltransferase TERM 4747 3079569 - 3079559 - G 71 -4 -4.78077 | TCCAATGAAAACAAA TGAA TCG TTCA CAGCATCGACAGACG TERM 4748 3080292 - 3080265 - R 75 -4.3 -5.14965 | gap 1, opp_overlap 3080265 AGTGGCAGGAAAAAA GACAAAGT-CTC CTAAT AAGCACTTTGTC TTTTTCACATTATGA BPUM_3098 3080929 - 3080378 - | hypothetical protein BPUM_3099 3081030 - 3081212 + | hypothetical protein TERM 4749 3081259 - 3081227 - T 100 -16.5 -3.25942 | opp_overlap 3081227, overlap 3081230 ACCCCTTTATAGCAA TAACCCCCATTCTTA TGT TAAGAGTGGGGGTTA TTTTATTATACTCGG TERM 4750 3081227 - 3081259 + T 100 -18.7 -4.81212 | opp_overlap 3081227 3081230 ACCCCTTTATAGCAA TAACCCCCATTCTTA TGT TAAGAGTGGGGGTTA TTTTATTATACTCGG TERM 4751 3081256 - 3081230 - T 100 -13.8 -3.7732 | opp_overlap 3081227, overlap 3081227 CCTTTATAGCAATAA CCCCCATTCTTA TGT TAAGAGTGGGGG TTATTTTATTATACT TERM 4752 3081363 - 3081344 - T 100 -7.8 -5.47431 | opp_overlap 3081343 TGAACATACAAAAAA CCCTCATC AAAT GAAGAGGG GTTCATGAAAGACCT TERM 4753 3081588 - 3081566 - T 75 -7.7 -4.08557 | overlap 3081583 GTCTTCAAAGAAGAA GCCTGCACC GAAAA GATGCAGAC ATGTCTACTTATGCA BPUM_3100 3081902 - 3081597 - | hypothetical protein BPUM_3101 3082090 - 3081872 - | hypothetical protein TERM 4754 3082315 - 3082304 - g 71 -3 -4.91459 | opp_overlap 3082304 GAAGATCCAGAAAAA GATA TTTC TATC TACATTAACAGCCCT clpP2 3082130 - 3082726 + | ATP-dependent Clp protease proteolytic subunit TERM 4755 3082781 - 3082724 - T 76 -2.9 -5.35721 | gap 1, opp_overlap 3082741, overlap 3082732 3082741 ACAGAAGAACAAAAA TAATAT-GACAAAATAAACCGTCTGCTC CTT GAACAGACGGTTTTTTGTGTTGAAAATA CGCTTTACGACAACT TERM 4756 3082772 - 3082732 - T 100 -14.9 -2.9854 | opp_overlap 3082741, overlap 3082724 3082741 ACAAAAATAATATGA CAAAATAAACCGTCTGCTC CTT GAACAGACGGTTTTTTGTG TTGAAAATACGCTTT TERM 4757 3082741 - 3082763 + T 100 -12 -5.47159 | opp_overlap 3082732 3082724 3082741 ATATGACAAAATAAA CCGTCTGCTC CTT GAACAGACGG TTTTTTGTGTTGAAA TERM 4758 3082763 - 3082741 - T 100 -14.2 -4.81357 | opp_overlap 3082741, overlap 3082732 3082724 ATATGACAAAATAAA CCGTCTGCTC CTT GAACAGACGG TTTTTTGTGTTGAAA BPUM_3103 3083379 - 3082786 - | lysine decarboxylase mazG 3083502 - 3083831 + | nucleotide pyrophosphohydrolase TERM 4759 3083824 - 3083847 + T 100 -12.5 -5.0133 | opp_overlap 3083804 3083824 TTTCAGAACTGAAAA GCACGTGAC CACATT GTCACGTGC TTTTTTCCACCCCTA TERM 4760 3083847 - 3083824 - T 100 -12.5 -4.3208 | opp_overlap 3083824, overlap 3083804 TTTCAGAACTGAAAA GCACGTGAC CACATT GTCACGTGC TTTTTTCCACCCCTA BPUM_3105 3085482 - 3083860 - | SulP family sulfate permease BPUM_3106 3086173 - 3085520 - | carbonate dehydratase BPUM_3107 3086446 - 3086372 - | hypothetical protein BPUM_3108 3086655 - 3087626 + | gluconate 2-dehydrogenase TERM 4761 3087635 - 3087669 + G 100 -10.9 -4.49556 | opp_overlap 3087641, overlap 3087641 TGCTTGATTTTAATC GGAAAAGACGCAG AATTAAGAG CTGCGTCTTTTTC TTTATTTCATCAGAA TERM 4762 3087641 - 3087663 + G 91 -6.3 -5.5454 | opp_overlap 3087641, overlap 3087635 ATTTTAATCGGAAAA GACGCAG AATTAAGAG CTGCGTC TTTTTCTTTATTTCA BPUM_3109 3087623 - 3087712 + | hypothetical protein BPUM_3110 3087817 - 3088305 + | guanine-specific ribonuclease TERM 4763 3088319 - 3088340 + T 84 -4.4 -5.55664 | opp_overlap 3088307 3088319 AATCAATCAAAAAAA CAGCCC ATTTGACGCA GGGCTG TTTTTTTAATGCTAC TERM 4764 3088340 - 3088319 - T 84 -4.4 -5.66868 | opp_overlap 3088319, overlap 3088307 AATCAATCAAAAAAA CAGCCC ATTTGACGCA GGGCTG TTTTTTTAATGCTAC BPUM_3111 3089098 - 3088352 - | N-hydroxyarylamine O-acetyltransferase TERM 4765 3089118 - 3089139 + r 72 -5.1 -4.78572 | opp_overlap 3089118, overlap 3089113 TTCCCTCCTAAAAAA CTGAGCCTT TGAA GAGACTCAG TTTTCTTGATTGACA TERM 4766 3089139 - 3089118 - R 81 -6.6 -5.00616 | opp_overlap 3089118 3089113 TTCCCTCCTAAAAAA CTGAGCCT TTGAAG AGACTCAG TTTTCTTGATTGACA BPUM_3112 3089393 - 3089136 - | phosphocarrier protein Chr BPUM_3113 3090370 - 3089420 - | hypothetical protein TERM 4767 3090291 - 3090304 + g 74 -6.7 -4.3739 | overlap 3090289 3090301 TTCATACGGATGAGG GCAGA AAGC TCTGC TTTTGTGCAGCAGTC BPUM_3114 3091347 - 3090388 - | hypothetical protein TERM 4768 3090531 - 3090543 + g 78 -9.1 -3.85242 | CTGTGTCGAACTGTA CAGGC TGT GCCTG TTCTTCTGCATATTT BPUM_3115 3092271 - 3091348 - | hypothetical protein BPUM_3116 3092739 - 3092275 - | NUDIX family hydrolase TERM 4769 3092974 - 3092952 - R 100 -8.5 -5.95166 | gap 1, overlap 3092953 TTTAAGCAAAAAAAA GGACACGGAT TCTC ATCCGTG-CC AAACATGTATTCCTT TERM 4770 3092974 - 3092953 - R 86 -10.9 -4.15473 | overlap 3092952 TTAAGCAAAAAAAAG GACACGGAT TCTC ATCCGTGCC AAACATGTATTCCTT trxB 3094047 - 3093097 - | thioredoxin-disulfide reductase BPUM_3118 3094102 - 3094233 + | hypothetical protein TERM 4771 3094221 - 3094254 + T 80 -9.7 -3.70811 | opp_overlap 3094224, overlap 3094223 3094224 TCTTCAAAAAAAGAA AAAGCTTCCTTAAAC TGCT GTTTAAGGAAGCCTG TTTACGGTTATATAG TERM 4772 3094223 - 3094252 + T 90 -12.3 -3.43081 | opp_overlap 3094224, overlap 3094221 3094224 TTCAAAAAAAGAAAA AGCTTCCTTAAAC TGCT GTTTAAGGAAGCC TGTTTACGGTTATAT TERM 4773 3094251 - 3094224 - T 100 -15.8 -5.86609 | opp_overlap 3094223 3094221 3094224 TCAAAAAAAGAAAAA GCTTCCTTAAAC TGCT GTTTAAGGAAGC CTGTTTACGGTTATA TERM 4774 3094224 - 3094251 + T 100 -15.8 -2.65126 | opp_overlap 3094224, overlap 3094223 3094221 TCAAAAAAAGAAAAA GCTTCCTTAAAC TGCT GTTTAAGGAAGC CTGTTTACGGTTATA BPUM_3119 3095672 - 3094281 - | C40 family peptidase TERM 4775 3096008 - 3095988 - R 90 -6.8 -5.5604 | opp_overlap 3095988 TTAACCAAGAAAAAA GCATGACC TTTTC GGCCACGC TTCAATCTCATAAAT BPUM_3120 3097493 - 3096036 - | transcriptional regulator TERM 4776 3096162 - 3096183 + g 78 -4.3 -5.24796 | opp_overlap 3096162 CCATACATAATAAGA TGCTGCTGC CCAT GCAGGCGCA TTTTTCTTATCTACG TERM 4777 3096413 - 3096431 + g 91 -7.4 -5.38326 | opp_overlap 3096416, overlap 3096416 CATCAAGGACAGATT GAAGAACG TCA CGTTCTCC TTTTTGTTTGCTTAC TERM 4778 3097627 - 3097598 - R 85 -10.1 -4.19238 | opp_overlap 3097604, overlap 3097604 TTTTCAATTGGAAAA TAAAAAGCCAGAG GTAT CCCCGGCTTTTCA CTCACCTTGATGACG TERM 4779 3097621 - 3097604 - R 91 -6.9 -5.46706 | opp_overlap 3097604, overlap 3097598 ATTGGAAAATAAAAA GCCAGAG GTAT CCCCGGC TTTTCACTCACCTTG hisI 3098254 - 3097625 - | bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein hisF 3099009 - 3098251 - | imidazole glycerol phosphate synthase subunit HisF hisA 3099743 - 3099006 - | 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase TERM 4780 3099426 - 3099416 - G 71 -6.8 -4.11884 | AAGCAGAATTAGAAA CAGC CGA GCTG CCAAGGATGACCCGA hisH 3100378 - 3099740 - | imidazole glycerol phosphate synthase subunit HisH hisB 3100962 - 3100378 - | imidazoleglycerol-phosphate dehydratase TERM 4781 3100915 - 3100930 + g 70 -2.6 -4.97405 | AATCTCTAATGTTAA TGAAAT ATTC GTTTCA TTTGTTTTTCTCGCT hisD 3102248 - 3100959 - | histidinol dehydrogenase TERM 4782 3101116 - 3101104 - G 74 -7.7 -4.07568 | GTTTTCTTTTGAAAA TCGGT CAC ACCGA GTGGGCTAGAAAATC hisG 3102886 - 3102245 - | ATP phosphoribosyltransferase catalytic subunit hisZ 3104054 - 3102879 - | ATP phosphoribosyltransferase regulatory subunit TERM 4783 3103425 - 3103415 - G 71 -6.8 -4.19238 | opp_overlap 3103415 3103414 CTCTTAACTCTAAAA GCTG TAA CAGC CTCGTTTTATCGATG TERM 4784 3104407 - 3104383 - g 74 -4.9 -4.7629 | overlap 3104387 CGACCAAGTCAAAAA GACAGCTTCAC CAC ACGAAGCAGCC AAAGAAAAAGAAAAC BPUM_3129 3104288 - 3105082 + | hypothetical protein TERM 4785 3105137 - 3105112 - T 100 -14.9 -5.27779 | opp_overlap 3105112 GGGAACATGAAAAAA CCATCCTCTAT TCGA ATAGAGGATGG TTTTTTCATAATGAT TERM 4786 3105112 - 3105137 + T 100 -14.9 -5.19212 | opp_overlap 3105112 GGGAACATGAAAAAA CCATCCTCTAT TCGA ATAGAGGATGG TTTTTTCATAATGAT BPUM_3130 3105781 - 3105143 - | thioredoxin BPUM_3131 3106467 - 3105826 - | FMN reductase TERM 4787 3106560 - 3106544 - R 84 -2.3 -5.76949 | CATTGGTAAAAAAAA TTGAATA GAT CATCCAA TTTTTTTGATTAACA BPUM_3132 3106981 - 3106553 - | transcriptional regulator TERM 4788 3107041 - 3107063 + r 87 -12 -3.18452 | opp_overlap 3107041 ATTGTCAACAAAAAA GTCTGCCGAG CTA CTCAGCAGAC TTAGATTGACGTACT TERM 4789 3107063 - 3107041 - R 100 -14.2 -5.45652 | opp_overlap 3107041 ATTGTCAACAAAAAA GTCTGCCGAG CTA CTCAGCAGAC TTAGATTGACGTACT BPUM_3133 3107569 - 3107051 - | hypothetical protein TERM 4790 3107245 - 3107266 + g 80 -8.9 -4.00756 | opp_overlap 3107245 AGACTTCATCACCAA TATAGACTT CCCC AAGTCTATA TTCTTTAATCAAATA BPUM_3134 3108221 - 3107571 - | pyrophosphatase PpaX TERM 4791 3107787 - 3107773 - G 71 -10 -2.58579 | overlap 3107772 CCAAGCTTGGATAAT GCCAGT TGA ACTGGC TCAGGATGCGGCTTT TERM 4792 3108096 - 3108082 - G 81 -7.2 -4.72497 | GATGGACCAATAAAA TGAAGA ATC TCTTCA CGGCTGTACTGACCA BPUM_3135 3109162 - 3108218 - | hypothetical protein TERM 4793 3108497 - 3108507 + g 71 -6.8 -4.11369 | TAACCCAGCGACCAT CGTC ATC GACG TATTTTCTTTCATTC lgt 3110006 - 3109182 - | prolipoprotein diacylglyceryl transferase hprK 3110950 - 3110018 - | HPr kinase/phosphorylase TERM 4794 3110591 - 3110604 + g 79 -6.7 -4.66833 | opp_overlap 3110587 3110586, overlap 3110587 GTTGGTCAAACGACT CGACA GTCT TGTCG TTTTTAGGCTTGAAC TERM 4795 3110783 - 3110769 - G 76 -2.8 -5.40474 | AGCTGTTCAAAAAAA GAAAGC TCT GTTTTC CCTAAAAGTTGAACT nagA 3111128 - 3112315 + | N-acetylglucosamine-6-phosphate deacetylase TERM 4796 3112433 - 3112452 + G 74 -9.4 -3.39471 | overlap 3112424 CAACGGGGGGTACAC CTCTTGAT ACAT ATCAAGAG TTAATTCACCTTTAT nagB 3112315 - 3113040 + | glucosamine-6-phosphate deaminase BPUM_3140 3113065 - 3113790 + | transcriptional regulator TERM 4797 3113827 - 3113781 - T 74 -9.7 -2.7094 | gap 1, opp_overlap 3113792 3113821 3113823, overlap 3113780 3113792 GCTCATTCATACAAT GGAAAGATAAACAGTAC-CCTT ATAA AAGGAGCACTGTTTTTATTTCC TAAGAAATGTTGCTT TERM 4798 3113792 - 3113816 + T 76 -3.6 -5.33405 | gap 1, opp_overlap 3113781 3113780 3113792 CAATGGAAAGATAAA CAGTAC-CCTT ATAA AAGGAGCACTG TTTTTATTTCCTAAG TERM 4799 3113816 - 3113792 - T 72 -5.8 -4.3665 | gap 1, opp_overlap 3113792, overlap 3113781 3113780 CAATGGAAAGATAAA CAGTAC-CCTT ATAA AAGGAGCACTG TTTTTATTTCCTAAG BPUM_3141 3117677 - 3113820 - | metallophosphoesterase TERM 4800 3116693 - 3116705 + g 76 -7.7 -4.08767 | TCTCAGATGGAATTT GTGCT TTT AGCAC TTTTCCAGGCGTAGG TERM 4801 3117169 - 3117180 + g 71 -2.2 -5.15969 | AATTCAAATGCATCT TTGC CTTT GCGA TTTTTTGAATTGACA TERM 4802 3117792 - 3117769 - R 100 -8.2 -5.4477 | AAAGGGTCAAAAAAA CCGTTAGC TTTTTTTC GCTAACGG CTCCACAATTCCTTT BPUM_3142 3118158 - 3117772 - | hypothetical protein pspC 3118353 - 3118159 - | bacteriophage shock protein C BPUM_3144 3119451 - 3118360 - | hypothetical protein BPUM_3145 3119798 - 3119463 - | hypothetical protein TERM 4803 3119622 - 3119610 - G 80 -4.8 -5.18726 | TGTTGACAATAAAAA TGGG ATAGA CCCA AAAACGAGCAACACG BPUM_3146 3119996 - 3120226 + | hypothetical protein TERM 4804 3120235 - 3120252 + T 83 -11.3 -3.59262 | opp_overlap 3120235 GCAATAAAAGAAAAA CCCCTCT TAAA AGAGGGG TTTCAGCGTGTAGAC TERM 4805 3120252 - 3120235 - T 100 -11.3 -5.62288 | opp_overlap 3120235 GCAATAAAAGAAAAA CCCCTCT TAAA AGAGGGG TTTCAGCGTGTAGAC TERM 4806 3120420 - 3120382 - T 100 -21.4 -4.18506 | opp_overlap 3120388, overlap 3120388 TCACGCTGAAAAGAA GACAAAGGGCTAAAATAA AGA TCATTTTAGCCCTTTGTC AACAATCTGACCCCC TERM 4807 3120388 - 3120414 + T 86 -11 -3.87373 | opp_overlap 3120382 3120388 TGAAAAGAAGACAAA GGGCTAAAATAA AGA TCATTTTAGCCC TTTGTCAACAATCTG TERM 4808 3120414 - 3120388 - T 100 -13.2 -4.45253 | opp_overlap 3120388, overlap 3120382 TGAAAAGAAGACAAA GGGCTAAAATAA AGA TCATTTTAGCCC TTTGTCAACAATCTG TERM 4809 3120432 - 3120451 + T 100 -13.6 -5.31275 | TGTCAACAATCTGAC CCCCCTCT TAAA AGAGGGGG TTTTTTATGATGAAG uvrA 3123332 - 3120456 - | excinuclease ABC subunit A TERM 4810 3121264 - 3121287 + g 71 -8.2 -3.52896 | GGCGTACGACCGATT GGAGATTGAT CAAT ATCAATCACC TTATCTAAATGATCC TERM 4811 3122577 - 3122565 - G 75 -9.1 -3.70722 | CTCACCAATAGAGAA TCCGC AGT GCGGA CAGGCATGATGTTCA uvrB 3125325 - 3123340 - | excinuclease ABC subunit B TERM 4812 3123940 - 3123956 + g 73 -5.1 -4.71426 | CTCTTTTAAATAATC TGTCAGA TCC TCAGACA TTTTCTTCGTCAGCG TERM 4813 3125406 - 3125393 - R 73 -6.7 -4.20977 | opp_overlap 3125392 AAGAACACAAAAATA CGAAC TAAA GTTCG GCTCTTGCTTGATTT BPUM_3149 3125601 - 3125437 - | hypothetical protein TERM 4814 3125575 - 3125546 - G 85 -5.7 -5.09221 | overlap 3125562 GAGAACAAAAAGAAA GCTGCACTCACTA AAAT TCGTAAGCACAGC TTAAAAACGTCACCT TERM 4815 3125618 - 3125628 + r 72 -5.4 -4.66264 | opp_overlap 3125618 CGCTCTTGATAATCA CATC AAT GATG TTTTTCAGCCTTTTC BPUM_3150 3125865 - 3125620 - | hypothetical protein TERM 4816 3126073 - 3126090 + H 73 -7.1 -4.08216 | opp_overlap 3126073 ATTCTATGATTAAAA TGATAGT GCGC ACTATCA TTTTAGAAACAATAG TERM 4817 3126090 - 3126073 - H 76 -7.1 -4.30844 | opp_overlap 3126073 ATTCTATGATTAAAA TGATAGT GCGC ACTATCA TTTTAGAAACAATAG TERM 4818 3126277 - 3126287 + G 70 -5.4 -4.53602 | opp_overlap 3126275 3126277 TTATCAAAACCAACA GCTT TTC AAGC TTTCTTTCATATCAC TERM 4819 3127356 - 3127376 + G 70 -5.6 -4.32046 | AGTGAGCGTATGTAT GAAATTTT AGAGA AAAATTTC TTTCCTTTTTACGAA TERM 4820 3128128 - 3128118 - g 75 -5.4 -4.82901 | CTTCTTGTACAAAAA GGAA CGC TTCC TCATCAAGAAGATCT ppsA 3126150 - 3128681 + | pyruvate, water dikinase TERM 4821 3128976 - 3128955 - g 75 -3 -5.10208 | CAACGCCAACAAAAA CCTTAGAA GCAGAA TTCAAAGG GGATTTGTACACCGA BPUM_3152 3128762 - 3129334 + | TetR family transcriptional regulator TERM 4822 3129315 - 3129349 + F 79 -7.2 -4.56775 | opp_overlap 3129317 CACACATTTTCATGA GAGGAATTTCTCCC GCTTAAA GGGTGGAATTCTTC TTTTTCACAAAAGGT TERM 4823 3129610 - 3129620 + G 75 -5.4 -4.88407 | GCATGTATTTAACCG GAGT GAC ACTC TTTTTAATTGGCTCG TERM 4824 3130059 - 3130075 + G 73 -3.7 -5.04249 | overlap 3130057 ATTTATGGCATTCTG GCAATGA TTG TCATTCC TTTATTTTTTAGACA TERM 4825 3130595 - 3130609 + G 71 -4.2 -4.77442 | ATTGATTGGTATCAT GAGTGG TTT CCAATC TTTATTTATTGTATT BPUM_3153 3129375 - 3130709 + | major facilitator transporter TERM 4826 3130713 - 3130747 + F 100 -10.1 -5.3167 | gap 1, opp_overlap 3130713 CATTCCGCCTAATGA CTCCCTGCGCTCTATA TCAA TTTAGAGCG-GGGGAG TTTTCTTTATTTTTC BPUM_3154 3130986 - 3131969 + | lipoprotein BPUM_3155 3131966 - 3132652 + | response regulator TERM 4827 3133707 - 3133730 + G 72 -9.6 -3.10244 | overlap 3133711 TATTTATGGTGACAG CGATCGACTT GAAC AAGTCGTTCG TAATTTATTGGACAA BPUM_3156 3132649 - 3134067 + | sensor histidine kinase TERM 4828 3134110 - 3134082 - f 74 -9 -3.65714 | opp_overlap 3134087, overlap 3134087 AAATGACACCTTAAA CAAAACAGCTCT TTTCT AGAGCTGTTTTT ATTCAACAGAAAAAT TERM 4829 3134087 - 3134105 + F 91 -8.9 -5.06414 | opp_overlap 3134082 3134087 ACACCTTAAACAAAA CAGCTCT TTTCT AGAGCTG TTTTTATTCAACAGA TERM 4830 3134105 - 3134087 - f 91 -8.9 -4.89521 | opp_overlap 3134087, overlap 3134082 ACACCTTAAACAAAA CAGCTCT TTTCT AGAGCTG TTTTTATTCAACAGA TERM 4831 3135225 - 3135199 - g 71 -8.8 -3.39668 | overlap 3135192 3135191 GTGCAAACGGTACAA TACCACCTGA TATGCCT TCAGGCGGTA ATAGTGATGGACCTC TERM 4832 3136192 - 3136179 - g 70 -5.3 -4.57275 | CAAAAAAATGGAAAA GAAGT AGCT ACTTC TAACTGGCAGAACAG BPUM_3157 3134211 - 3136334 + | glycosyltransferase BPUM_3158 3136365 - 3137357 + | glycosyltransferase TERM 4833 3137363 - 3137395 + T 79 -6.9 -4.64766 | opp_overlap 3137363 ACAGCATTAAAAAAA GCGCGCGAGACCT CTTCAGA AGGTCATGCACGC TTTTTAGCCTATACG TERM 4834 3137395 - 3137363 - T 100 -7.6 -5.56568 | opp_overlap 3137363 ACAGCATTAAAAAAA GCGCGCGAGACCTC TTCAG AAGGTCATGCACGC TTTTTAGCCTATACG BPUM_3159 3138753 - 3137404 - | APC family amino acid-polyamine-organocation transporter TERM 4835 3138845 - 3138814 - R 100 -13.8 -5.07941 | AAAAGCATATAAAAA GGCCAGTCATCTCC TTGA AGAGACGACTGACC TTGCAACCGCGTTAC BPUM_3160 3139061 - 3138933 - | hypothetical protein BPUM_3161 3139819 - 3139145 - | nitroreductase BPUM_3162 3140051 - 3140416 + | hypothetical protein TERM 4836 3140403 - 3140420 + T 86 -5.5 -5.67063 | opp_overlap 3140403 GCCCAAAAGAAAAAA GCTGCCA TCTC TAGCAGC TTTTTTTATGATGAA TERM 4837 3140420 - 3140403 - T 100 -7.7 -5.79595 | opp_overlap 3140403 GCCCAAAAGAAAAAA GCTGCCA TCTC TAGCAGC TTTTTTTATGATGAA BPUM_3163 3141613 - 3140426 - | hypothetical protein TERM 4838 3141345 - 3141334 - G 71 -4.4 -4.91194 | AGAATAAAGAGAAAA CGAT GGTC ATCG CTGCAATCATCACGA TERM 4839 3141595 - 3141553 - G 100 -7.1 -5.68438 | overlap 3141556 TCATGAAATAAAAAA GAGGGTGGATTAAAAACAG ACCGA CCGCTTTTAATCCAGCTCC CATCCACTCCGAGCT TERM 4840 3141592 - 3141556 - G 74 -9.6 -3.25791 | overlap 3141553 TGAAATAAAAAAGAG GGTGGATTAAAAACAG ACCGA CCGCTTTTAATCCAGC TCCCATCCACTCCGA BPUM_3164 3142035 - 3141682 - | hypothetical protein BPUM_3165 3142023 - 3142136 + | hypothetical protein TERM 4841 3142130 - 3142120 - TR 70 -2.6 -5.04987 | AATATCCGCAAAAAA TAAA ATA TTTA AAATGAGTGCTACTT TERM 4842 3142357 - 3142382 + Tr 71 -3.3 -5.07567 | opp_overlap 3142361, overlap 3142361 ACTTATGAACCAAAA AAAAGAGGC ATTTATTC GCCTCTTTA TTTTTTAAGATATAG TERM 4843 3142378 - 3142361 - TR 100 -4.8 -5.96521 | opp_overlap 3142357 3142361 ATGAACCAAAAAAAA GAGGCA TTTATT CGCCTC TTTATTTTTTAAGAT TERM 4844 3142361 - 3142378 + Tr 73 -4.1 -5.05153 | opp_overlap 3142361, overlap 3142357 ATGAACCAAAAAAAA GAGGC ATTTATTC GCCTC TTTATTTTTTAAGAT BPUM_3166 3143828 - 3142380 - | peptidase TERM 4845 3143731 - 3143745 + g 71 -10 -2.57781 | opp_overlap 3143725, overlap 3143726 3143734 ACTGCAACAGCTGCT TGCGGA GAC TCCGCA TGAGTTCCCTCTTTA TERM 4846 3144231 - 3144247 + G 77 -6.5 -4.63218 | overlap 3144224 GTGGCTTCCTTTGCA GGAGCTA AGA TTGCTCC TTTTATTCCAGAGGG BPUM_3167 3143982 - 3144722 + | hypothetical protein TERM 4847 3144770 - 3144738 - T 100 -15.1 -3.8211 | opp_overlap 3144743, overlap 3144743 TGTTATTTAGAATAA GAAAAGCCGATAACA TGA TGTTATCGGCTTTTT GTTTAGCGGATATAT TERM 4848 3144743 - 3144765 + T 100 -15 -5.27335 | opp_overlap 3144743 3144738 TTTAGAATAAGAAAA GCCGATAACA TGA TGTTATCGGC TTTTTGTTTAGCGGA TERM 4849 3144765 - 3144743 - T 100 -15 -4.95547 | opp_overlap 3144743, overlap 3144738 TTTAGAATAAGAAAA GCCGATAACA TGA TGTTATCGGC TTTTTGTTTAGCGGA BPUM_3168 3146038 - 3144773 - | M23B subfamily peptidase TERM 4850 3145213 - 3145224 + g 82 -5.8 -5.0133 | ATCCGCTACTTTGAG GTGC AGGT GCAC TTTTTTCAGCAGCTG TERM 4851 3145673 - 3145686 + g 77 -3.9 -5.16572 | overlap 3145671 ACGAATTCGATCTTT GAAAA TAGC TTTTC TTTTTTCAATTCGAT TERM 4852 3146108 - 3146078 - R 70 -9.1 -3.20573 | gap 1, opp_overlap 3146076 3146075 3146073, overlap 3146066 3146076 CTATCGACATGAAGA GTCGACCGGATGAA TCGG TTCAACCGGTC-AC ACCTTCTATCTAATT ftsX 3147041 - 3146151 - | cell division protein FtsX TERM 4853 3146520 - 3146507 - G 74 -4.5 -4.86731 | overlap 3146493 TGGCTGTAAATAAAA GCCCA ATGA TGAGC GCAATCCCTACATTT TERM 4854 3146606 - 3146618 + g 70 -2.7 -5.03747 | CTTTATACGTACCTT TTAGG TTT TCTAA TTTTTTAGCAACTTT TERM 4855 3146661 - 3146685 + g 75 -5.7 -4.71426 | opp_overlap 3146666, overlap 3146663 TGGATCTGATGTTTT CACAATAAACG CAT CGTTTAATGGG TTTTCTTGATCAACA ftsE 3147720 - 3147034 - | cell-division ATP-binding protein BPUM_3171 3147796 - 3147951 + | hypothetical protein TERM 4856 3148074 - 3148103 + T 76 -3 -5.36441 | gap 1, opp_overlap 3148079, overlap 3148079 3148079 TACATATAAAAATAA AAAAACC-TTGTC GATTA GACAAAGGTTTTA TTTTTTCTCTGCAAG TERM 4857 3148079 - 3148098 + T 80 -2.9 -5.51612 | gap 1, opp_overlap 3148079, overlap 3148079 3148074 ATAAAAATAAAAAAA CC-TTGTC GATTA GACAAAGG TTTTATTTTTTCTCT TERM 4858 3148097 - 3148079 - T 100 -5.3 -6.23317 | opp_overlap 3148079 3148079 3148074 ATAAAAATAAAAAAA CCTTGTC GATTA GACAAAG GTTTTATTTTTTCTC cccB 3148430 - 3148101 - | cytochrome c551 TERM 4859 3148400 - 3148388 - G 73 -9.1 -3.40899 | opp_overlap 3148395, overlap 3148375 AAGCCGCCAGCACAA GCAGC ATC GCTGC AAACAGCATCGTTAA BPUM_3173 3149327 - 3148479 - | hypothetical protein BPUM_3174 3149539 - 3149429 - | hypothetical protein BPUM_3175 3149517 - 3150251 + | hypothetical protein TERM 4860 3150236 - 3150264 + Tr 88 -6.7 -5.1971 | opp_overlap 3150242, overlap 3150237 3150242 ATGGCTACCACCAGC AAAAAAGCTCCCG TAA TGGGAGCTTTTCA TTTTTACTTTTTCGT TERM 4861 3150237 - 3150263 + Tr 80 -10.2 -3.69386 | opp_overlap 3150242, overlap 3150236 3150242 TGGCTACCACCAGCA AAAAAGCTCCCG TAA TGGGAGCTTTTC ATTTTTACTTTTTCG TERM 4862 3150258 - 3150242 - TR 100 -9.4 -5.19212 | opp_overlap 3150237 3150236 3150242 ACCACCAGCAAAAAA GCTCCC GTAAT GGGAGC TTTTCATTTTTACTT TERM 4863 3150242 - 3150258 + Tr 91 -10.1 -4.81523 | opp_overlap 3150242, overlap 3150237 3150236 ACCACCAGCAAAAAA GCTCCCG TAA TGGGAGC TTTTCATTTTTACTT yusX 3152061 - 3150268 - | M3B subfamily peptidase TERM 4864 3150446 - 3150456 + g 71 -6.8 -4.19817 | TCAAACGAAGTACCA GCCT CCA AGGC TTTTGCATAAATCCC TERM 4865 3150524 - 3150514 - G 71 -4.6 -4.61566 | TGGGAAATTATAAAA CGGA ACA CCCG TGATATGGAAATGCA TERM 4866 3151561 - 3151547 - G 73 -2.8 -5.21236 | AAGCTAGAATAAAAA TCATCC CAC GCATGA TAGCCATCAACAGCT TERM 4867 3152166 - 3152182 + r 74 -5 -4.95806 | opp_overlap 3152166, overlap 3152168 TCACAATAAAAAAAA CCCGGC AAGAA GCCGAG TTTTTATGATAATTT TERM 4868 3152182 - 3152166 - R 100 -7.2 -6.17268 | opp_overlap 3152166 3152168 TCACAATAAAAAAAA CCCGGC AAGAA GCCGAG TTTTTATGATAATTT prfB 3153169 - 3152186 - | peptide chain release factor RF2 TERM 4869 3152320 - 3152344 + g 72 -7.2 -4.0348 | opp_overlap 3152319 3152316, overlap 3152324 GGAATACATAAGAGC GAATTTGGCT TCCCC AGCCAATTTC TTTCTGCTCTCCTCT TERM 4870 3152324 - 3152340 + g 79 -6.6 -4.60949 | opp_overlap 3152319 3152316, overlap 3152320 TACATAAGAGCGAAT TTGGCT TCCCC AGCCAA TTTCTTTCTGCTCTC TERM 4871 3153166 - 3153156 - G 73 -5.4 -4.63527 | TGATCATTCCAAAAA TCAG CCT CTGA CATTGTCGCTTCGAG TERM 4872 3153322 - 3153354 + r 72 -7.2 -3.97043 | gap 1, opp_overlap 3153325 3153327 3153331, overlap 3153325 TATGGGGGCTGACAT G-AATAGAAAGAGGT TTTC ACCTCTTTCCATTAC TTATTCTGTCTTCCC TERM 4873 3153350 - 3153325 - R 82 -11.3 -3.25823 | opp_overlap 3153322 3153325, overlap 3153327 3153331 GGGGGCTGACATGAA TAGAAAGAGGT TTTC ACCTCTTTCCA TTACTTATTCTGTCT TERM 4874 3153325 - 3153350 + r 74 -9.1 -3.60998 | opp_overlap 3153325 3153327 3153331, overlap 3153322 GGGGGCTGACATGAA TAGAAAGAGGT TTTC ACCTCTTTCCA TTACTTATTCTGTCT TERM 4875 3153348 - 3153327 - R 83 -11.7 -3.19602 | opp_overlap 3153325 3153322, overlap 3153325 3153331 GGGCTGACATGAATA GAAAGAGGT TTTC ACCTCTTTC CATTACTTATTCTGT TERM 4876 3153344 - 3153331 - R 73 -6.7 -4.2586 | opp_overlap 3153325 3153322, overlap 3153327 3153325 TGACATGAATAGAAA GAGGT TTTC ACCTC TTTCCATTACTTATT secA 3155880 - 3153355 - | preprotein translocase subunit SecA TERM 4877 3153469 - 3153494 + g 74 -10.5 -2.73487 | overlap 3153468 3153466 TTTCACTGTCTTCTC CTCATCACCCT CTTG AGGCTGATGAG CTGTTGTTTGCCCTT TERM 4878 3156007 - 3156040 + r 84 -4.5 -5.57054 | gap 1, opp_overlap 3156012, overlap 3156012 CAATGATTTCGAACA AAAAACCCG-CCCCTC ATG GAGGGAACGGGTTTAC TTTTTTTAGGTTATT TERM 4879 3156012 - 3156035 + r 84 -8.8 -4.5187 | gap 1, opp_overlap 3156012, overlap 3156007 ATTTCGAACAAAAAA CCCG-CCCCTC ATG GAGGGAACGGG TTTACTTTTTTTAGG TERM 4880 3156035 - 3156012 - R 100 -11 -5.45652 | gap 1, opp_overlap 3156012 3156007 ATTTCGAACAAAAAA CCCGC-CCCTC ATG GAGGGAACGGG TTTACTTTTTTTAGG raiA 3156630 - 3156067 - | ribosome-associated inhibitor A BPUM_3180 3158505 - 3156820 - | sensor histidine kinase TERM 4881 3157152 - 3157167 + g 71 -4 -4.75356 | CCTGCTCAACCTTTG TCATCG AATG TGATGA TTTTTCAGTATCTTT BPUM_3181 3158918 - 3158538 - | hypothetical protein fliT 3159273 - 3158932 - | flagellar protein FliT fliS 3159674 - 3159270 - | flagellar protein FliS fliD 3161206 - 3159692 - | flagellar capping protein flaG 3161568 - 3161227 - | flagellar protein FlaG TERM 4882 3161747 - 3161727 - R 100 -6.9 -5.75478 | opp_overlap 3161727 AATCAGATAAAAAAA TCCTCAC TTTTTTT GTGAGGA TAATTGAGAGAGGAG csrA 3161954 - 3161730 - | carbon storage regulator BPUM_3187 3162382 - 3161948 - | flagellar assembly protein FliW BPUM_3188 3162989 - 3162411 - | hypothetical protein TERM 4883 3163031 - 3163017 - R 89 -7.8 -5.1101 | opp_overlap 3163011 3163017 CCATGATGCAAAAAA GCACCC AAC GGATGC TTTTTATTATCTTAA TERM 4884 3163017 - 3163031 + r 81 -5.6 -5.29716 | opp_overlap 3163017, overlap 3163011 CCATGATGCAAAAAA GCACCC AAC GGATGC TTTTTATTATCTTAA flgL 3163949 - 3163038 - | flagellar hook-associated protein FlgL flgK 3165479 - 3163959 - | flagellar hook-associated protein FlgK yvyG 3165977 - 3165495 - | hypothetical protein flgM 3166259 - 3165996 - | transcriptional repressor FlgM BPUM_3193 3166758 - 3166339 - | flagellar protein comFC 3167501 - 3166815 - | competence protein FC comFB 3167791 - 3167498 - | competence protein FB comFA 3169237 - 3167858 - | competence protein FA TERM 4885 3168840 - 3168856 + g 73 -3.7 -4.93898 | AAATCAGATTTGTGT TTTATCG CTT CGATCAA TTTTTCTGATGCTCT TERM 4886 3169351 - 3169319 - R 100 -7.9 -5.75538 | opp_overlap 3169324 3169325, overlap 3169325 GCTAAAAAAGAAAAA TAAAACCCCTTTTCT AAG AGAAAAGAGATTTTT AAGATTTATCTAATC TERM 4887 3169345 - 3169325 - R 76 -9.1 -3.85156 | opp_overlap 3169325 3169324, overlap 3169319 AAAGAAAAATAAAAC CCCTTTTCT AAG AGAAAAGAG ATTTTTAAGATTTAT degV 3170199 - 3169357 - | hypothetical protein TERM 4888 3170315 - 3170293 - R 100 -9.9 -5.31059 | ATAGTAATCAAAAAA GCCTGCCTA ATCAA TAGGCAAGC CCGTTATATCCGAAA degU 3171106 - 3170417 - | response regulator DegU degS 3172346 - 3171171 - | sensor histidine kinase DegS TERM 4889 3171889 - 3171873 - G 71 -8.7 -3.35073 | overlap 3171875 AGCATCTTCAAGTAA CACGCCA ACT TGGCGTA AGTCCTGATTGAGAT TERM 4890 3171887 - 3171875 - G 71 -9.1 -3.24329 | overlap 3171873 CATCTTCAAGTAACA CGCCA ACT TGGCG TAAGTCCTGATTGAG TERM 4891 3172615 - 3172632 + G 70 -2.7 -5.03227 | overlap 3172603 TGGCGAGCATGAGAT CGTCATT GAAA AATCACG TTTTATTTGTCATAT TERM 4892 3173202 - 3173191 - g 73 -5.8 -4.431 | GATTTATTTAGAAAA GGAC ATTG GTCC GATAAAGGAGACAGA BPUM_3200 3172568 - 3173236 + | hypothetical protein BPUM_3201 3173221 - 3174312 + | transcriptional attenuator TERM 4893 3174343 - 3174319 - T 100 -10.8 -5.29445 | gap 1, opp_overlap 3174319 GGCCAATAATAAAAA CAGCCCAGTTC CTAG GAAC-GGGCTG TTTTTTATTGTCTTT TERM 4894 3174319 - 3174343 + T 100 -10.8 -5.66338 | gap 1, opp_overlap 3174319 GGCCAATAATAAAAA CAGCCCAGTTC CTAG GAAC-GGGCTG TTTTTTATTGTCTTT mraY2 3175415 - 3174348 - | phospho-N-acetylmuramoyl-pentapeptide-transferase TERM 4895 3174945 - 3174965 + g 76 -10.5 -2.97475 | opp_overlap 3174944 3174958, overlap 3174944 AGCTAGTCCATCAAG GCCGTCAAT TAA ATTGATGGC ATTTGTAATACCGAC TERM 4896 3175552 - 3175528 - R 93 -7.2 -5.5454 | opp_overlap 3175523 3175528 TGAAACAAATAAAAA CGCACAATCC TGAAT GAATTATGCG TTTTCTTTAATATTC tuaH 3176745 - 3175546 - | glycosyltransferase TERM 4897 3175643 - 3175653 + g 71 -2.4 -5.1861 | opp_overlap 3175643 CTTAGGTGTCTAAAA GCCG TGT CGTC TTTTTTGCTGATCAC tuaG 3177517 - 3176762 - | family 2 glycosyltransferase tuaF 3178219 - 3177542 - | hypothetical protein BPUM_3206 3179749 - 3178292 - | hypothetical protein galE2 3180718 - 3179789 - | UDP-glucose 4-epimerase tuaD 3182071 - 3180737 - | UDP-glucose 6-dehydrogenase tuaC 3183335 - 3182151 - | glycosyltransferase tuaB 3184783 - 3183332 - | colanic acid exporter tuaA 3185461 - 3184802 - | sugar transferase TERM 4898 3185646 - 3185627 - R 100 -13.6 -5.15969 | opp_overlap 3185623 3185641 TTTCAACGTAAAAAA GACCCGCA ATTC TGCGGGTC TCCGGTCTTTTCTTT BPUM_3213 3186246 - 3185815 - | hypothetical protein TERM 4899 3186429 - 3186402 - R 100 -12.1 -5.02476 | gap 1 AGACTTTTGAAAAAA GGCTGC-CGAGA GACGT TCTCGAGCAGCC TAAGAGGAGTATCTG lytC 3187960 - 3186470 - | N-acetylmuramoyl-L-alanine amidase lytB 3190091 - 3187983 - | stage II sporulation protein TERM 4900 3188350 - 3188363 + g 71 -3.1 -5.05153 | GCAATCTTAATCTCT GAAGC TGAT GTTTC TTTATTTTTTAGAAT TERM 4901 3188794 - 3188809 + g 78 -9 -3.90112 | opp_overlap 3188794 TTCAATGCCTCAACA TGCCAG CTTG CTGGCA TTTCATTCGGCACAA BPUM_3216 3190436 - 3190113 - | lipoprotein TERM 4902 3190495 - 3190508 + H 100 -5.3 -6.09888 | opp_overlap 3190495 TTAAGGTAAATTTAA GGTTT TTTG AAACC TTTTTTTTGTTACAA lytR 3190619 - 3191539 + | membrane-bound transcriptional regulator LytR TERM 4903 3191588 - 3191544 - T 100 -14.5 -5.1861 | opp_overlap 3191553, overlap 3191547 TGGAGCAGTAAAAAA GAAGACAAAGGGCTAAAATCA AGA TCATTTTAGCCCTTTGTCAAC AATCTGAAGACTACA TERM 4904 3191585 - 3191547 - T 100 -19.2 -4.68456 | opp_overlap 3191553, overlap 3191544 AGCAGTAAAAAAGAA GACAAAGGGCTAAAATCA AGA TCATTTTAGCCCTTTGTC AACAATCTGAAGACT TERM 4905 3191553 - 3191579 + T 86 -11 -3.87373 | opp_overlap 3191547 3191544 AAAAAAGAAGACAAA GGGCTAAAATCA AGA TCATTTTAGCCC TTTGTCAACAATCTG TERM 4906 3191594 - 3191617 + T 100 -12.6 -5.42265 | opp_overlap 3191592 3191591 3191599 CTTTGTCAACAATCT GAAGACTACA TGAC TGTAGTCTTC TTTTTTATGATTTGA mnaA 3192761 - 3191622 - | UDP-N-acetylglucosamine 2-epimerase TERM 4907 3192780 - 3192791 + H 73 -3 -5.22006 | TATGCCTCTTTTCAT CAAT ACAT ATTG TTTTTATTGTACTAA TERM 4908 3193718 - 3193696 - g 70 -9.2 -2.9006 | overlap 3193683 3193708 AATTCAGCTGACAGA TGCCATCCAG AAG CTGAATGACA TCCAGCGAGTATTCG gtaB 3193001 - 3193882 + | UTP--glucose-1-phosphate uridylyltransferase TERM 4909 3193882 - 3193911 + T 100 -13.7 -3.76402 | opp_overlap 3193888, overlap 3193888 AGAAGAAGTGAATTA AAAAAAGCTGCCG AAAT CGGCAGCTTTTTA TTTGATCACTGAGAT TERM 4910 3193905 - 3193888 - T 100 -12.7 -5.64006 | opp_overlap 3193882 3193888 AGTGAATTAAAAAAA GCTGCCG AAAT CGGCAGC TTTTTATTTGATCAC TERM 4911 3193888 - 3193905 + T 100 -12.7 -5.33405 | opp_overlap 3193888, overlap 3193882 AGTGAATTAAAAAAA GCTGCCG AAAT CGGCAGC TTTTTATTTGATCAC tagH 3195510 - 3193909 - | teichoic acids export protein ATP-binding subunit tagG 3196357 - 3195530 - | ABC transporter ATP-binding protein TERM 4912 3196500 - 3196482 - R 100 -12.4 -5.46129 | CAAGAAATTAAAAAA GGAGGCAG TTA CTGCCCCC TAGCTAGATTCATCT BPUM_3222 3198342 - 3196510 - | glycosyltransferase BPUM_3223 3199507 - 3198329 - | aminotransferase TERM 4913 3198709 - 3198736 + g 71 -4.2 -4.79451 | opp_overlap 3198709 3198712, overlap 3198712 CTGGTATTTCAGAAA GATGTTTTTCAT AAAG ATGATAAACTTC TTTTCTCTTTAAGAT TERM 4914 3199273 - 3199242 - G 70 -5.2 -4.49389 | opp_overlap 3199242, overlap 3199237 ATCGTAGAAGCAAAA GTAAAAGGAGTAGT AATA ATTTCCCCTTTTAC TTCTAATGTTTTCAG BPUM_3224 3200788 - 3199508 - | carbamoylphosphate synthase large subunit short form TERM 4915 3200507 - 3200518 + g 71 -2.2 -5.1417 | AGATGTTACAACTAT TGCA TTTA TGCG TTTTTGATTTTGTGC BPUM_3225 3202804 - 3200801 - | CDP-glycerol glycerophosphotransferase TERM 4916 3202602 - 3202626 + g 81 -7.4 -4.67038 | GCTATATCCTTCAGA TTAAAAATAG CTATT CTATTTTTAA TTTTACTTTTCAAAA rfbB 3203962 - 3202901 - | dTDP-glucose 4,6-dehydratase BPUM_3227 3204866 - 3203982 - | glucose-1-phosphate thymidylyltransferase tagF 3207336 - 3205081 - | CDP-glycerol glycerophosphotransferase TERM 4917 3205375 - 3205357 - G 73 -7.5 -4.12296 | TGCATAATCAAAGAA CACAGAT GAGTA ATCTGTG ATGAGCAGATCAGAA TERM 4918 3206205 - 3206188 - G 72 -9.9 -2.87132 | overlap 3206190 TTTCTTTTTCACAGA CAGCTTG CTCG CAAGCTG AAAGGTCGTTTTGAA TERM 4919 3206863 - 3206873 + g 71 -2.4 -5.23292 | opp_overlap 3206863, overlap 3206858 ATATGGTACAGCAAG GAGC ATT GCAC TTTTATTTTCTATGA tagE 3209454 - 3207424 - | poly(glycerol-phosphate) alpha-glucosyltransferase TERM 4920 3207694 - 3207677 - G 73 -9.9 -2.92618 | overlap 3207676 TTTTTAGAGAATAAC TCGGCAT GGTT ATGCCGA TCATAACCGACAAGT TERM 4921 3209534 - 3209507 - R 83 -5.6 -5.47159 | overlap 3209510 TGTTAACATAAAAAA GCACTTCTCACC AAAA GATAAGAAGCAC TATCTTAAATAATTA tagD 3209945 - 3209547 - | glycerol-3-phosphate cytidylyltransferase tagA 3210306 - 3211076 + | N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D- mannosaminyltransferase tagB 3211088 - 3212275 + | CDP-glycerol glycerophosphotransferase TERM 4922 3212258 - 3212287 + T 100 -10.8 -6.08342 | gap 1, opp_overlap 3212258 CTCTTACACAAAAAA CGTCCG-GCTTCT CAATA GGAAGCACGGACG TTTTTTTATTTGTTA TERM 4923 3212287 - 3212258 - T 100 -10.1 -5.36441 | gap 1, opp_overlap 3212258 CTCTTACACAAAAAA CGTCCG-GCTTC TCAATAG GAAGCACGGACG TTTTTTTATTTGTTA lytD 3214923 - 3212293 - | beta-N-acetylhexosaminidase TERM 4924 3213159 - 3213172 + g 71 -2.3 -5.18355 | overlap 3213160 TGTAGTTCGTTTGCA TGACC ATTG GGCCA TTTTTGATTTTTACG TERM 4925 3213549 - 3213559 + g 100 -6.8 -5.88471 | ACGTTTTTGTACTGC TGGC AAC GCCA TTTTTTTTGATGATC TERM 4926 3214335 - 3214353 + g 73 -5.2 -4.74598 | opp_overlap 3214320 3214335 TACCACCTGAAATCA GCTGATAC ACA GTGCCAGC TTTGTTTTCAGTTTG TERM 4927 3214730 - 3214741 + g 82 -5.8 -5.03945 | opp_overlap 3214730 CCTGAGGTTTGATAA GTGG CTGT CCAC TTTTTGTCCTTCTTC TERM 4928 3215303 - 3215293 - g 84 -2.6 -5.61881 | opp_overlap 3215298 TTTTAAAAAGAAAAA TAAA TTT TTTA AAAGACCCTTTAAGA TERM 4929 3215577 - 3215555 - g 88 -10.8 -3.82276 | overlap 3215553 GAATAAATATAAAGA TGACAAAAAT GTG ATTTTTGTCA AAAGAAACTCTAAAG TERM 4930 3215746 - 3215767 + G 75 -3 -5.15969 | opp_overlap 3215738, overlap 3215747 CAGGAAACCCTGCAC ATTCTCAG AACGTA CTGAGAAA TTTTTTGAGTTCAGA tagFA 3215244 - 3218858 + | glycosyltransferase TERM 4931 3218917 - 3218882 - T 77 -6.3 -4.83615 | opp_overlap 3218884 3218908, overlap 3218884 TATTTGTCACAAAAA GAGACTTTCAAGC TGTTACTTAT GCTTGAAAGTCTT TTCATTTTATATATG TERM 4932 3218915 - 3218884 - T 79 -8.9 -4.03995 | opp_overlap 3218884 3218908, overlap 3218882 TTTGTCACAAAAAGA GACTTTCAAGC TGTTACTTAT GCTTGAAAGTC TTTTCATTTTATATA TERM 4933 3218884 - 3218915 + T 88 -8.9 -4.75518 | opp_overlap 3218884 3218882, overlap 3218908 TTTGTCACAAAAAGA GACTTTCAAGC TGTTACTTAT GCTTGAAAGTC TTTTCATTTTATATA pmi 3219874 - 3218924 - | mannose-6-phosphate isomerase BPUM_3236 3220842 - 3220021 - | sugar ABC transporter ATP-binding/membrane protein BPUM_3237 3221810 - 3220839 - | sugar ABC transporter ATP-binding/membrane protein TERM 4934 3221491 - 3221480 - G 70 -5.8 -4.2828 | TCTGATCTAGTAAAA TCGC AAGT GCGA GACCAGAGGCAATAA TERM 4935 3221835 - 3221858 + r 85 -11.7 -3.57662 | opp_overlap 3221818 3221835, overlap 3221831 3221829 CTCCTTTTTAAAAAA GAGGCGGTG CTAAGT CGCCGCCTC TTCGTCTTTATTTCA TERM 4936 3221858 - 3221835 - R 91 -9.5 -5.00616 | opp_overlap 3221835 3221831 3221829, overlap 3221818 CTCCTTTTTAAAAAA GAGGCGGTG CTAAGT CGCCGCCTC TTCGTCTTTATTTCA BPUM_3238 3223131 - 3221866 - | sugar ABC transporter ATP-binding protein TERM 4937 3223225 - 3223236 + r 76 -3 -5.45726 | TTCTTCACTTTTTTA TGAA ATTC TTCA TTTTTTTACGGTCTG BPUM_3239 3224652 - 3223234 - | response regulator BPUM_3240 3225920 - 3224646 - | sensor histidine kinase BPUM_3241 3227089 - 3226085 - | sugar ABC transporter ATP-binding protein TERM 4938 3227144 - 3227124 - R 80 -2.6 -5.60993 | gap 1, opp_overlap 3227128, overlap 3227128 TTGCGCATAAAAAAA GAGC-TGCT TATA AGCATACTC TCTCGACCTCTATAA ysnE 3227621 - 3227154 - | GNAT family acetyltransferase TERM 4939 3227711 - 3227688 - R 84 -8.9 -4.4388 | opp_overlap 3227688 3227691 ACATAAACGAACAAA CAACCGGCA TTCATC TGCCAGTTG TTCATTTGATAGCGC kdgA 3228330 - 3227731 - | 2-keto-3-deoxygluconate-6-phosphate aldolase kdgK 3229318 - 3228302 - | 2-dehydro-3-deoxygluconokinase kdgR 3230415 - 3229405 - | PurR family transcriptional regulator TERM 4940 3229472 - 3229487 + g 75 -3.3 -5.08824 | GCACTTTCATCCCCT TCAAG CCGAGT CTTGA TTTTTTGCATGGCGG TERM 4941 3230569 - 3230558 - H 80 -3 -5.5454 | TTAAATAAACAAAAA GAAA GCGA TTTC AAATTAACGGTTGAC kduI 3230678 - 3231505 + | 5-keto-4-deoxyuronate isomerase TERM 4942 3232192 - 3232206 + G 82 -7.8 -4.43477 | overlap 3232194 GAAAGCCTGAGGATC TAGCCG GTG CGGCTG TTTTCCTTAGCTCAC TERM 4943 3232194 - 3232204 + G 75 -8.2 -3.82321 | overlap 3232192 AAGCCTGAGGATCTA GCCG GTG CGGC TGTTTTCCTTAGCTC kduD 3231510 - 3232283 + | 2-deoxy-D-gluconate 3-dehydrogenase TERM 4944 3232292 - 3232317 + F 100 -8.4 -5.56264 | opp_overlap 3232292 3232294 GAGATAAACAGACGA GAGAATTCCT ATTTGC AGGGATTCTC TTTTTTCTATTTGCA gerBA 3232389 - 3233855 + | spore germination protein BA gerBB 3233859 - 3234959 + | spore germination protein BB TERM 4945 3235840 - 3235828 - g 72 -6.3 -4.37886 | GTATCCTGCAGAAAA CTCAT ACG ATGAG CAGTACATCCAAAGA gerBC 3234956 - 3236101 + | spore germination protein BC TERM 4946 3236109 - 3236134 + T 86 -7.5 -5.00616 | gap 1, opp_overlap 3236109 AATGGTAATGCAAAA GGCGGTTATCCC GAA GGGG-ACCCGCC TTTTTTACGCACGAC BPUM_3251 3237652 - 3236114 - | glycosyltransferase TERM 4947 3237641 - 3237620 - G 95 -9.4 -4.46072 | opp_overlap 3237639 3237640 TTTAACAAAGATAAA CCAGCCGC ATCTGG GCAGCTGG TCGTGGTTCACACCG ywtG 3239013 - 3237649 - | major facilitator transporter TERM 4948 3237777 - 3237766 - G 73 -7.2 -4.15703 | TTTCACAAATAAGAA GGCG CCTA CGCC GATGACCGCATAAAT TERM 4949 3238787 - 3238776 - G 85 -5.8 -5.14682 | CGATAATAAATAAAA TCGC TGCG GCGA TGATGGCTTTTTTTC ywtF 3239284 - 3240249 + | LytR family transcriptional regulator TERM 4950 3240250 - 3240280 + F 95 -12.6 -3.67558 | opp_overlap 3240251 3240257, overlap 3240251 3240257 CTTGAATTATCATAA ACAGAAAGCGTCCC TAA GGGGCGCTTTTTGA TTGTTGAGATCTCTC TERM 4951 3240251 - 3240279 + F 100 -16.1 -2.80053 | opp_overlap 3240251 3240257, overlap 3240250 3240257 TTGAATTATCATAAA CAGAAAGCGTCCC TAA GGGGCGCTTTTTG ATTGTTGAGATCTCT TERM 4952 3240279 - 3240251 - f 90 -11.7 -4.02022 | opp_overlap 3240250 3240251 3240257, overlap 3240257 TTGAATTATCATAAA CAGAAAGCGTCCC TAA GGGGCGCTTTTTG ATTGTTGAGATCTCT TERM 4953 3240273 - 3240257 - f 86 -9.3 -4.41609 | opp_overlap 3240251 3240250 3240257, overlap 3240251 TATCATAAACAGAAA GCGTCCC TAA GGGGCGC TTTTTGATTGTTGAG TERM 4954 3240257 - 3240273 + F 100 -11.5 -4.99435 | opp_overlap 3240257 3240251, overlap 3240251 3240250 TATCATAAACAGAAA GCGTCCC TAA GGGGCGC TTTTTGATTGTTGAG TERM 4955 3240313 - 3240326 + F 81 -5.3 -5.29846 | CTTGGCTTATTTCCT TGATC ATTC GATCA TTTTTGTTTAGCCTT ywtE 3240418 - 3241320 + | HAD family hydrolase TERM 4956 3241346 - 3241369 + T 84 -4.6 -5.63012 | gap 1 GAGAGAAATCTAAAA GTCCGATACGA GCA TTG-ATCGGGC TTTTTCTTTATTTTT ywtD 3242600 - 3241377 - | C40 family peptidase TERM 4957 3242673 - 3242691 + r 75 -10.2 -3.0362 | opp_overlap 3242673, overlap 3242664 TTTTTCGACAAAAAA GAGCACGC AAT GCGTGCCC TCTATGCTCTTTAGA TERM 4958 3242691 - 3242673 - R 100 -12.4 -5.24129 | opp_overlap 3242673 3242664 TTTTTCGACAAAAAA GAGCACGC AAT GCGTGCCC TCTATGCTCTTTAGA ywtC 3242878 - 3242708 - | poly-gamma-glutamate synthesis protein YwtC ywtB 3244041 - 3242875 - | poly-gamma-glutamate synthesis protein YwtB ywtA 3244509 - 3244060 - | poly-gamma-glutamate synthesis protein YwtA ywsC 3245706 - 3244525 - | capsule biosynthesis protein YwsC gerKA 3246452 - 3247933 + | spore germination protein KA TERM 4959 3248505 - 3248524 + G 71 -9.4 -2.96695 | overlap 3248488 3248504 3248507 3248509 TCAATGAACGGCTTT GAGATGAT TCTC ATCATCTC TCCTTTCATGAAAGG gerKB 3247923 - 3249020 + | spore germination protein KB TERM 4960 3249307 - 3249296 - g 75 -3 -5.14563 | opp_overlap 3249288 TTGTTGATCAAAAAA TTGA TATG TCAA AAATGCGGGTCATGC gerKC 3249010 - 3250152 + | spore germination protein KC TERM 4961 3250179 - 3250153 - f 74 -9.6 -3.10715 | opp_overlap 3250153, overlap 3250158 GGGATTATTAGTTAA GAAAAGGAAGAT GTG ATCTTTCTTTTC TTTTTTTATTTTTTT TERM 4962 3250153 - 3250179 + F 100 -11.8 -6.32976 | opp_overlap 3250153 3250158 GGGATTATTAGTTAA GAAAAGGAAGAT GTG ATCTTTCTTTTC TTTTTTTATTTTTTT TERM 4963 3250384 - 3250370 - g 73 -5.6 -4.41956 | overlap 3250371 3250372 ATACAGATACGAAAA CCCGCG TGA CACAGG CGATGCAGGAGCTGA rbsR 3250270 - 3251256 + | LacI family transcriptional regulator rbsK 3251253 - 3252131 + | ribokinase TERM 4964 3252493 - 3252452 - g 70 -6 -4.32903 | overlap 3252490 ACCAAACAGGCAAAA GCAGTCATACGCAC-GGGTG AAGC CACCCCATACGCA-AACTGC ATTCTTCATGCCGGT rbsD 3252128 - 3252520 + | ribose ABC transporter ATP-binding protein rbsA 3252536 - 3254017 + | ribose ABC transporter ATP-binding protein rbsC 3254019 - 3254972 + | ribose ABC transporter ATP-binding protein rbsB 3254986 - 3255903 + | ribose ABC transporter ATP-binding protein TERM 4965 3255931 - 3255912 - T 93 -10.7 -4.95487 | opp_overlap 3255910 3255907 3255906 AAAATAAACACAAAA CCCCCGA TTTCCC TCGGGGG TATAGATTGTTGACA TERM 4966 3255943 - 3255981 + T 100 -15.6 -3.91716 | opp_overlap 3255949, overlap 3255949 GGGGTATAGATTGTT GACAAAGGGCTAAAATGA TCT TGATTTTAGCTCTTTGTC TTCTTTACAGCGTGA TERM 4967 3255949 - 3255975 + T 78 -7.4 -4.40333 | opp_overlap 3255949, overlap 3255943 TAGATTGTTGACAAA GGGCTAAAATGA TCT TGATTTTAGCTC TTTGTCTTCTTTACA TERM 4968 3256113 - 3256132 + T 74 -4.9 -4.93316 | opp_overlap 3256113, overlap 3256105 GTCTACACGCTGAAA CCACCGA TTTCCC TCGGGGG TTTTTCCTATTATTC ywrF 3256744 - 3256142 - | hypothetical protein alsR 3257706 - 3256810 - | LysR family transcriptional regulator TERM 4969 3257338 - 3257328 - G 71 -6.8 -4.1891 | GCTGCGGAACAGAAA GCTG CTC CAGC TCAATACTGACAGAG TERM 4970 3258048 - 3258030 - g 70 -3.7 -4.77079 | opp_overlap 3258031 3258044, overlap 3258031 CAGACACGAACAAAA TGCCGCC TTTAT GGCAGCT GCTGTCGGCCGTTTA alsS 3257857 - 3259557 + | acetolactate synthase alsD 3259593 - 3260363 + | acetolactate decarboxylase TERM 4971 3260370 - 3260394 + F 100 -17.2 -4.82901 | opp_overlap 3260370 GATCAATAAAAGAAA GACACCCCGG TAATT CCGGGGTGTC TTTTTATGCGAAAGG TERM 4972 3260394 - 3260370 - f 100 -17.2 -4.90302 | opp_overlap 3260370 GATCAATAAAAGAAA GACACCCCGG TAATT CCGGGGTGTC TTTTTATGCGAAAGG ywrC 3260481 - 3260993 + | Lrp/AsnC family transcriptional regulator ywrB 3261040 - 3261591 + | CHR family chromate ion transporter TERM 4973 3261711 - 3261685 - g 79 -8 -4.29227 | TGAATTATGAAGAAA TCGTCAACCATT TTC ATTGGATGACGA ACGAAGGATTTTCCA ywrA 3261588 - 3262124 + | CHR family chromate ion transporter TERM 4974 3262125 - 3262157 + T 88 -10.8 -4.24606 | opp_overlap 3262130, overlap 3262130 ATTCTACCGCATTAA AAAAACCGATAACA TGATC TGTTATCGGTTTTC TTTTACATATAGATT TERM 4975 3262130 - 3262152 + T 93 -10.7 -5.11836 | opp_overlap 3262130, overlap 3262125 ACCGCATTAAAAAAA CCGATAACA TGATC TGTTATCGG TTTTCTTTTACATAT TERM 4976 3262152 - 3262130 - T 100 -10.7 -5.52986 | opp_overlap 3262130 3262125 ACCGCATTAAAAAAA CCGATAACA TGATC TGTTATCGG TTTTCTTTTACATAT ywqF 3263479 - 3262160 - | UDP-glucose 6-dehydrogenase TERM 4977 3263562 - 3263593 + r 78 -7.2 -4.36914 | opp_overlap 3263566, overlap 3263566 TCATAAAAGCATACA AAAACCCCCTGCCA TCAC TAGCAGGGGGTTAC TTTTATGAAACAAGA TERM 4978 3263566 - 3263589 + r 90 -12.4 -3.75115 | opp_overlap 3263566, overlap 3263562 AAAAGCATACAAAAA CCCCCTGCCA TCAC TAGCAGGGGG TTACTTTTATGAAAC TERM 4979 3263589 - 3263566 - R 100 -14.6 -5.07941 | opp_overlap 3263566 3263562 AAAAGCATACAAAAA CCCCCTGCCA TCAC TAGCAGGGGG TTACTTTTATGAAAC BPUM_3277 3263739 - 3263596 - | hypothetical protein TERM 4980 3264850 - 3264836 - g 78 -2.1 -5.52023 | overlap 3264837 AGCAGCAAGAAAAAA CGGTA GAACG TACCA TCGGATTGATGCACA ywqB 3263926 - 3265533 + | hypothetical protein TERM 4981 3266196 - 3266182 - g 73 -2.8 -5.18726 | opp_overlap 3266184, overlap 3266184 GCGTGATAAGAAAAA CAGTGA TCT TCACTT TTTTGAAGGCATCCG TERM 4982 3266184 - 3266194 + G 78 -5.4 -5.0133 | opp_overlap 3266182 3266184 GTGATAAGAAAAACA GTGA TCT TCAC TTTTTTGAAGGCATC TERM 4983 3266267 - 3266250 - g 73 -5.5 -4.70583 | overlap 3266251 CGTATCAAGATAAAA TCTCCAG AGAG CTGGAGC GATTCGGTCAAATTG TERM 4984 3266266 - 3266251 - g 73 -9 -3.41627 | overlap 3266250 GTATCAAGATAAAAT CTCCAG AGAG CTGGAG CGATTCGGTCAAATT TERM 4985 3267495 - 3267465 - g 82 -3.2 -5.45652 | opp_overlap 3267465 3267475, overlap 3267468 3267473 ACCGTGAAGAAAAAA GAATTGAACAGCTG CAG CAGCTGATTAAACC TTTCCTATTAAGACG TERM 4986 3267492 - 3267468 - g 78 -5.7 -4.81306 | opp_overlap 3267465 3267475, overlap 3267465 3267473 GTGAAGAAAAAAGAA TTGAACAGCTG CAG CAGCTGATTAA ACCTTTCCTATTAAG TERM 4987 3267487 - 3267473 - g 78 -10 -3.43246 | opp_overlap 3267465 3267475, overlap 3267468 3267465 GAAAAAAGAATTGAA CAGCTG CAG CAGCTG ATTAAACCTTTCCTA TERM 4988 3268182 - 3268167 - g 75 -3.2 -5.1675 | CGATCGAGGAAAAAA TCGATC AGAT GCTCGA AACAAAACAAACGTT ywqA 3265520 - 3268297 + | SNF2 family helicase TERM 4989 3268310 - 3268342 + T 100 -13 -5.40004 | gap 1, opp_overlap 3268310 TAATCCAAGCAAAAA GAGGACTTTTC-TCA AACA TGATGAAAAGTCCTC TTTTTTCATTTCATA TERM 4990 3268342 - 3268310 - T 100 -13 -4.90013 | gap 1, opp_overlap 3268310 TAATCCAAGCAAAAA GAGGACTTTTC-TCA AACA TGATGAAAAGTCCTC TTTTTTCATTTCATA ytvA2 3269156 - 3268368 - | hypothetical protein TERM 4991 3268940 - 3268952 + g 70 -7.7 -3.66148 | overlap 3268938 TTCTAATTTGTTGGA GAGCA ATT TGCTC TGTTTCATTTCCTTG ywpJ 3270134 - 3269310 - | HAD family hydrolase TERM 4992 3270297 - 3270265 - g 100 -14.9 -4.67982 | overlap 3270267 TTTTATGGAATAAAA GGGTACCCGGCCATG CTA CATGACCGGATACAC ACAAGGGGATTTAAG TERM 4993 3270295 - 3270267 - g 100 -16.1 -2.63702 | overlap 3270265 TTATGGAATAAAAGG GTACCCGGCCATG CTA CATGACCGGATAC ACACAAGGGGATTTA BPUM_3282 3270241 - 3270396 + | hypothetical protein ywpG 3270918 - 3270541 - | hypothetical protein ywpF 3271015 - 3271425 + | hypothetical protein TERM 4994 3271447 - 3271430 - T 100 -8.4 -5.53079 | opp_overlap 3271430 AAAACACATAAAAAA GAGCGG GATTAG CCGCTC TTAGATAGTTGACGA TERM 4995 3271458 - 3271496 + T 100 -19.2 -3.52204 | opp_overlap 3271464, overlap 3271464 CGCTCTTAGATAGTT GACGAAGGGCTAAAATGA ATC TTATTTTAGCCCTTTGTC TTCCTTTCAGCGTGA TERM 4996 3271490 - 3271464 - T 80 -11 -3.18239 | opp_overlap 3271458 3271464 TAGATAGTTGACGAA GGGCTAAAATGA ATC TTATTTTAGCCC TTTGTCTTCCTTTCA TERM 4997 3271464 - 3271490 + T 100 -13.2 -4.31 | opp_overlap 3271464, overlap 3271458 TAGATAGTTGACGAA GGGCTAAAATGA ATC TTATTTTAGCCC TTTGTCTTCCTTTCA TERM 4998 3271593 - 3271609 + T 76 -5.1 -5.0916 | TTGCCTACACGCTGA GAGCG GGATTAG CGCTC TTTTTCTATTGAACA mscL 3272010 - 3271615 - | MscL family large conductance mechanosensitive ion channel protein TERM 4999 3272128 - 3272106 - R 100 -12.8 -4.96848 | GTTTCCATATAAAAA GCGATTCATC CTT GATGAACCGC CAGGCAAATCATGAT fabZ 3272571 - 3272137 - | 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase TERM 5000 3273825 - 3273803 - g 93 -2.6 -5.93809 | opp_overlap 3273804 3273822, overlap 3273804 TTTTTACAAAAAAAA GGGCGACT TTGAGCG AGCCGCCT TTTTTATCATGAGAG TERM 5001 3273804 - 3273824 + G 82 -4.6 -5.31275 | opp_overlap 3273803 3273804, overlap 3273822 TTTTACAAAAAAAAG GGCGACTT TGAGC GAGCCGCC TTTTTTATCATGAGA rapD1 3272790 - 3273845 + | aspartate phosphatase response regulator TERM 5002 3273840 - 3273853 + T 70 -8.1 -3.29593 | opp_overlap 3273840, overlap 3273822 3273838 TTTTTTATCATGAGA GGCTG ATGT CAGCC TGTTCGTTATCGAAT flhP 3274678 - 3273860 - | flagellar hook-basal body protein TERM 5003 3274168 - 3274184 + g 70 -2.9 -4.91712 | opp_overlap 3274168 GATTATCTCTTGAAA TGGCTGT CAG ACGACCA TTTTTATCAATTGAA flhO 3275548 - 3274709 - | flagellar basal-body rod protein TERM 5004 3275667 - 3275638 - R 100 -14.5 -5.06414 | opp_overlap 3275636 GTTCTTTAATAAAAA TCCCCCATTCTTT CGAA AAAGAATGAGGGA CATCATTAGCTGAGT mbl 3276674 - 3275673 - | rod shape-determining protein Mbl spoIIID 3277137 - 3276859 - | stage III sporulation protein D TERM 5005 3277571 - 3277593 + G 100 -7.1 -5.65927 | gap 1 TGCTGCTTATGATTT GTACATGTCC CAAT GGAC-TGTAC TTTTTTGTTTGGATA ywoH 3277476 - 3277889 + | MarR family transcriptional regulator ywoG 3277903 - 3279090 + | major facilitator transporter ywoA 3279165 - 3279794 + | phosphatase TERM 5006 3279795 - 3279843 + T 93 -4.9 -5.7946 | gap 4, opp_overlap 3279810 CTGTCTAACTCTTAA GCGGCTTGCGATAACGT-GATGAAG ATT CTTCTTCCAC-TTATCGCA--CCGC TTTTTTTATTGACCG ywoD 3281220 - 3279832 - | major facilitator transporter TERM 5007 3280042 - 3280032 - G 71 -4.6 -4.58395 | GGCATGTTTGAAAAA GCCC AGA GGAC GTGCCAATCATATGC TERM 5008 3280744 - 3280723 - G 71 -4.3 -4.76041 | CAGATTCACTAAAAA GATCGCTGG CCAG CCGCCGATC GTCATCAAAAAGCCG TERM 5009 3282067 - 3282053 - g 70 -5.7 -4.28774 | overlap 3282058 CTAGCCAACGGAAAA CACGA TGCAG TCGTG ACGGATTTCGCCACA BPUM_3296 3281399 - 3282286 + | amino acid ABC transporter ATP-binding protein TERM 5010 3282297 - 3282317 + F 100 -12.6 -4.1822 | opp_overlap 3282293 3282292 3282290 ATTAAAACCACGATT GTGCGCCT TTTTT AGGCGCAC TTTCTTCAAATGGAG BPUM_3297 3282327 - 3283004 + | amino acid ABC transporter ATP-binding protein TERM 5011 3283004 - 3282984 - gf 73 -2.5 -5.24531 | ACCTTTGAGAAAAAA CTATCAGTC AGT GACCATTAG GAGGAGAAACATGAC glnQ2 3282958 - 3283755 + | glutamine ABC transporter ATP-binding protein TERM 5012 3283776 - 3283790 + F 75 -2.1 -5.47914 | ACGCCCTTTATTTTT CATGC TCAAT GTATG TTTTTTCTCATTTTT TERM 5013 3283868 - 3283846 - g 89 -7.1 -4.99056 | opp_overlap 3283846, overlap 3283847 GAATATAACCAAAAA CCATGTAAG ATTAA CTTACATGA ATATGTTATATATGA TERM 5014 3283867 - 3283847 - g 73 -8.4 -3.57807 | opp_overlap 3283846, overlap 3283846 AATATAACCAAAAAC CATGTAAG ATTAA CTTACATG AATATGTTATATATG BPUM_3299 3283777 - 3283962 + | hypothetical protein TERM 5015 3284712 - 3284699 - g 84 -3.8 -5.52023 | ATGATCAACAAAAAA CCGA CCATGC TCGG CGCAATATCTGGAGG TERM 5016 3284753 - 3284763 + G 74 -6.8 -4.39002 | opp_overlap 3284753, overlap 3284740 3284739 CTTGTGGCAATTACA CCTG CCG CAGG TTTTGTCACACCTTT nrgA 3283949 - 3285157 + | ammonium transporter nrgB 3285176 - 3285523 + | nitrogen-regulated PII-like protein TERM 5017 3285528 - 3285548 + T 93 -10.4 -5.00616 | opp_overlap 3285525 3285528, overlap 3285540 CCGCCCTTTAAACCA TCCTCCGC CGAGT GCGGGGGA TTTTTTAAGACAGAA TERM 5018 3285593 - 3285569 - T 100 -6.5 -5.80248 | opp_overlap 3285540 3285569 TAAGACAGAAAAAAA CCTCTGCAT GATTCAT ATACAGAGG TTTCAAGACTTAAGA spoIIQ 3286499 - 3285603 - | stage II sporulation membrane protein Q ywnH 3286631 - 3287125 + | acetyltransferase TERM 5019 3287162 - 3287206 + T 100 -14.5 -4.12188 | opp_overlap 3287171, overlap 3287165 3287167 3287171 AAGACGCTTCAGATT G