TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.368891 %AT, 7116181 nt, 69947 terms. Intergenic: 0.41439 %AT, H2T: 951007 nt, 9244 terms; T2T: 268985 nt, 6090 terms; H2H: 394845 nt, 7925 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|186474773|ref|NC_010622.1| Burkholderia phymatum STM815 chromosome 1, complete sequence (length 3479187) TERM 1 861 - 821 - g 73 -12.5 -3.35813 | overlap 822 CTGGACGCCAACGAA GCCGCGGCAGCCCG-CCGC ACGTG GCGGCCGGGC-GCTGCCGC GCAGGCCGCGGGCGG Bphy_0001 362 - 1918 + | chromosomal replication initiator protein DnaA Bphy_0002 2175 - 3278 + | DNA polymerase III, beta subunit TERM 2 3328 - 3297 - f 81 -11.6 -3.82084 | gap 1, opp_overlap 3299 3301 3305, overlap 3299 GTCCAACACGAAGAA CACACCAA-GGGGCG CAG CGCCCCTTTGGCGTT TTTATGGTGTTTTGA TERM 3 3326 - 3299 - f 88 -14.2 -3.49169 | gap 1, opp_overlap 3299 3301 3305, overlap 3297 CCAACACGAAGAACA CACCAA-GGGGCG CAG CGCCCCTTTGGCG TTTTTATGGTGTTTT TERM 4 3299 - 3326 + F 100 -12 -5.02201 | gap 1, opp_overlap 3299 3297, overlap 3301 3305 CCAACACGAAGAACA CACCAA-GGGGCG CAG CGCCCCTTTGGCG TTTTTATGGTGTTTT TERM 5 3301 - 3324 + F 73 -13.2 -2.73702 | gap 1, opp_overlap 3299 3297, overlap 3299 3305 AACACGAAGAACACA CCAA-GGGGCG CAG CGCCCCTTTGG CGTTTTTATGGTGTT TERM 6 3305 - 3319 + F 87 -12.8 -3.82067 | opp_overlap 3299 3297, overlap 3301 3299 CGAAGAACACACCAA GGGGCG CAG CGCCCC TTTGGCGTTTTTATG TERM 7 3981 - 3949 - g 72 -7 -4.2349 | gap 1, opp_overlap 3953 GGGCGAGACGGAAAA TCG-CGGCACTGAAG TGCA CTTCATGGCCGACGA GACGATCTTCGGCAA TERM 8 5175 - 5214 + G 86 -12.9 -3.9093 | gap 3 TCGCCGCCGAAGGTG CGACGCC-GATCGCCG-GCG ACG CGCTCGGCGAGCTGGCG-CG TTCTTATCTGCTGGC Bphy_0003 3392 - 5863 + | DNA gyrase, B subunit TERM 9 5921 - 5942 + T 100 -11.6 -5.76949 | opp_overlap 5921 TAGTCAAATGAAAAA CGCCAACC TATTCC GGTTGGCG TTTTTTTTGCACATC TERM 10 5942 - 5921 - T 100 -11.6 -5.00138 | opp_overlap 5921 TAGTCAAATGAAAAA CGCCAACC TATTCC GGTTGGCG TTTTTTTTGCACATC Bphy_0004 6237 - 5956 - | hypothetical protein TERM 11 8373 - 8390 + G 70 -7.7 -3.96148 | gap 1 TTCTCGCGGGTGGTG TGGTCGGC ATC GCCG-CCA TTTATAGTGACGAGC Bphy_0006 7331 - 8734 + | ethanolamine transproter TERM 12 9592 - 9575 - g 81 -3.3 -5.0916 | opp_overlap 9580, overlap 9580 GCCGGAACAGAAAAA GCCAATG CGGG CTTCGGC ATTTCGCTCGCGTTG Bphy_0007 8816 - 10210 + | ethanolamine ammonia lyase large subunit Bphy_0008 10207 - 11001 + | ethanolamine ammonia-lyase Bphy_0009 11434 - 11042 - | hypothetical protein TERM 13 11500 - 11468 - R 100 -17.7 -4.08767 | TCGACTCGCTGAAAA GGCGGGCGAACCGCA GCG CGCGGTTCGCCCAAC GGGAGCACGACGCTC Bphy_0010 13034 - 11514 - | aldehyde dehydrogenase TERM 14 12701 - 12753 + g 80 -14.8 -3.17075 | overlap 12700 CGGCCGCCATCGTTT CGCGCAGCGGCTTGCCGTTGTCGA TCGAT TCGGCGACGGCGAGGCGTTGCAGG TTCGCTTCGAGGCGG TERM 15 13162 - 13194 + H 84 -2.1 -5.40072 | gap 3, overlap 13167 13181 CGCCGACGGGCAACG CCG-GTGCA-CGC-AG CACT CTCGCGATGCATGCGG TTTTTTTGCGCGCAA Bphy_0011 13381 - 14397 + | AraC family transcriptional regulator Bphy_0012 14834 - 15019 + | hypothetical protein Bphy_0013 15034 - 16425 + | DEAD/DEAH box helicase domain-containing protein Bphy_0014 16752 - 17906 + | aminotransferase class I and II TERM 16 18706 - 18687 - g 81 -11.4 -4.04206 | overlap 18688 18701 CGACGCTCACACAAA GCGCGCTC GACG AAGCGCGC GACCGTCTGCCGGTG Bphy_0015 17921 - 18763 + | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Bphy_0016 18797 - 19588 + | extracellular solute-binding protein TERM 17 19607 - 19644 + F 100 -23.5 -4.19258 | opp_overlap 19590 19607 19611, overlap 19611 TGCGCTCTTCACACA GATACGCGCCGCGTGGT TTTC GCCACGCGGCGCGTTTC TTTTGCGTAACGTCT TERM 18 19644 - 19607 - f 100 -22.8 -2.87132 | opp_overlap 19607 19611, overlap 19590 19611 TGCGCTCTTCACACA GATACGCGCCGCGTGG TTTTCG CCACGCGGCGCGTTTC TTTTGCGTAACGTCT TERM 19 19611 - 19640 + F 100 -22.9 -4.68908 | opp_overlap 19607 19611, overlap 19607 CTCTTCACACAGATA CGCGCCGCGTGGT TTTC GCCACGCGGCGCG TTTCTTTTGCGTAAC TERM 20 19640 - 19611 - f 100 -22.2 -3.05022 | opp_overlap 19611 19607, overlap 19607 CTCTTCACACAGATA CGCGCCGCGTGG TTTTCG CCACGCGGCGCG TTTCTTTTGCGTAAC Bphy_0017 19749 - 20486 + | putative transmembrane anti-sigma factor Bphy_0018 20605 - 21123 + | ECF subfamily RNA polymerase sigma-24 factor Bphy_0019 21120 - 21953 + | putative transmembrane anti-sigma factor TERM 21 21973 - 22000 + F 100 -18.4 -4.84602 | TCGTTTTTCTATATT GGCGGCTGCGCC TTCG GGTGCGGCCGCC TTTGTTTGTTTATAT TERM 22 22093 - 22107 + F 71 -7.8 -4.09739 | overlap 22094 CACGTGGTTCGTCAC TGTGCG TAC CGCACG TTTTCAAGGAGTTGG Bphy_0020 22125 - 22394 + | hypothetical protein TERM 23 22455 - 22430 - f 76 -4.5 -4.84529 | opp_overlap 22430, overlap 22432 GCAGAAAGTGAAAAA GGCCGGAAAGC TTTC GCTAACCGGTC TTTCGAATACTTGGT TERM 24 23091 - 23111 + F 100 -11.1 -5.40474 | CGGGAATGTCGTAGG CCGGCAACC GCC GGTTGGCGG TTTTTTTACGCCCGT Bphy_0022 23411 - 25324 + | type VI secretion protein TERM 25 26626 - 26605 - g 93 -6.5 -5.11033 | gap 1, opp_overlap 26606, overlap 26596 CAGAAGGCGAAAAAA CCGCGCTCGC ACG GCGAG-GTGG CGATTGTGACGGGCT Bphy_0023 25363 - 28020 + | type VI secretion system Vgr family protein TERM 26 28372 - 28354 - g 81 -3 -5.06451 | TACGATCCCAAAAAA GAGGACCG TGT CGTTTCTC AACTTGATTTGACGA TERM 27 28618 - 28608 - g 74 -2.4 -4.81685 | AGTAAGCATGAAAAA TCCC TAT GGGC CGGAATTAACTATTC Bphy_0024 28054 - 28971 + | hypothetical protein Bphy_0025 29288 - 29647 + | hypothetical protein Bphy_0026 29667 - 30656 + | hypothetical protein TERM 28 30883 - 30862 - f 100 -13 -5.04601 | opp_overlap 30855 CTCAGAAAGCAAAAA GCCCAGCC GGTTAA GGCTGGGC TAAGTGCTTGAATTC TERM 29 31214 - 31238 + G 71 -9.9 -3.75153 | GAATTGCTCGACCGT GTGCTTGCGCC GTG GGTGCGGGCGC TTTCGCTTACGCCCG Bphy_0027 31178 - 31582 + | thioesterase superfamily protein Bphy_0028 31634 - 32500 + | patatin TERM 30 32522 - 32553 + T 72 -8.8 -3.93288 | opp_overlap 32529, overlap 32529 ACTGAAGCGCGCATA TAAAAAAGCGGCCT TCGA AGACCGCTTTTTAA TTTACTTCCGTCGCC TERM 31 32529 - 32546 + T 90 -6.9 -5.04222 | opp_overlap 32529, overlap 32522 CGCGCATATAAAAAA GCGGCCT TCGA AGACCGC TTTTTAATTTACTTC TERM 32 32546 - 32529 - T 100 -9.1 -5.36441 | opp_overlap 32522 32529 CGCGCATATAAAAAA GCGGCCT TCGA AGACCGC TTTTTAATTTACTTC Bphy_0029 33568 - 32555 - | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding TERM 33 34966 - 34954 - g 78 -7.7 -4.41494 | CACGCTGAAGGAAAA CGTGA TCT TCACG AACGTCGCGCTTACG TERM 34 35100 - 35082 - g 78 -8 -4.42806 | overlap 35083 CCATCGCGAAAGAAA CGGGCCGC AAG GCGGCGCA TCCGAACGCCCGCTT TERM 35 35137 - 35188 + G 84 -14.5 -3.36273 | gap 2, opp_overlap 35165, overlap 35178 GCCCGCTTCGCAATG CCCGTCGATC-G-ACGCCGACTGGG AAAA CCCAGCAGGCGTGCCGATCGACGCG TTCGTGTTCGGCGGC Bphy_0030 33920 - 35776 + | phosphoenolpyruvate carboxykinase (GTP) TERM 36 35807 - 35822 + F 90 -11.8 -4.1552 | opp_overlap 35807 35796, overlap 35811 35811 CTAACGCCCATATGA GCCGCC CTCG GGCGGC TTTCTTGAGCGCGTC Bphy_0031 36108 - 37196 + | LysR family transcriptional regulator TERM 37 37248 - 37275 + T 100 -12.7 -5.06816 | opp_overlap 37248 CAAGTCAATAAAAAA GCGCAGTCACC GTAAAA GGCGACTGCGC TTTTTGTTGCAGCCT TERM 38 37275 - 37248 - T 100 -14.9 -5.5074 | opp_overlap 37248 CAAGTCAATAAAAAA GCGCAGTCACC GTAAAA GGCGACTGCGC TTTTTGTTGCAGCCT Bphy_0032 40067 - 37341 - | DNA topoisomerase III TERM 39 37372 - 37394 + g 91 -6.8 -5.02074 | CGAGCGGCAGATTTA GCAGCCGAGG TTT TCGCGGCAGC TTTTTTGGCCGGTGC TERM 40 38233 - 38249 + g 76 -13.7 -3.12351 | opp_overlap 38226 TGCATGAAGGCGTCG CGCGGCA GCT TGCCGCG TTCCATCTGCGACAG TERM 41 38471 - 38490 + g 74 -10 -3.74747 | CCATCGCTTCGCGCA GTTCGTCG TCTT CGACGAGC TTTCCTGCGCCTTCC TERM 42 39097 - 39087 - G 72 -8.2 -4.07568 | GTTCTTGGCCGAAAA GCCG AAG CGGC CGTTGGCTTCACGCT TERM 43 39237 - 39249 + g 79 -10.5 -4.11216 | CGGCAGGCTCCAGAG GCGCG AAT CGCGC TTTTCCGGATCAAAC Bphy_0033 40682 - 40305 - | thioredoxin domain-containing protein Bphy_0034 41906 - 40737 - | DNA protecting protein DprA Bphy_0035 42162 - 42665 + | peptide deformylase Bphy_0036 42691 - 43674 + | methionyl-tRNA formyltransferase Bphy_0037 43774 - 44418 + | lysine exporter protein LysE/YggA Bphy_0038 44522 - 45379 + | peptidase M48 Ste24p TERM 44 45442 - 45422 - f 100 -14.7 -4.19238 | opp_overlap 45422 GCTGCAATTTGAAAA GGGGCGAGC ATG ACTCGCCCC TTTTTGTCGTACAAC TERM 45 45422 - 45442 + F 100 -14 -4.91109 | opp_overlap 45422 GCTGCAATTTGAAAA GGGGCGAG CATGA CTCGCCCC TTTTTGTCGTACAAC TERM 46 45695 - 45741 + G 83 -17.3 -2.52464 | overlap 45739 GAATCGCTCGGTTTC GCGCTC-GACTGCGCCGCGCAGG CCG TCGGCGCGGTGC-GTCAGGGCGC TGCGTTGCCCGCAGC TERM 47 46535 - 46518 - g 73 -9.1 -3.86346 | gap 1, overlap 46519 TGATCGCGCTAGAAA GCGACGCG ACG CGCG-CGC GCCGGATCGGCGAAA Bphy_0039 45662 - 47023 + | sun protein TERM 48 47559 - 47576 + G 78 -7.7 -4.35926 | overlap 47560 CCGCGACTGGAATCT TGCTTCC GACT GGAAGCG TTTTACCTTTACGGT Bphy_0040 47020 - 47610 + | hypothetical protein TERM 49 47632 - 47612 - f 76 -6.8 -4.42464 | gap 1, opp_overlap 47615, overlap 47613 47614 AACGTGCTAAATAAA GTGCGCCGG GCCA CCAGCGC-C GGCAGTCTCGTCGTC TERM 50 47860 - 47872 + G 75 -9.1 -3.95324 | CGGGACGCGGCTGCT CGCGA AGC TCGCG TTCTTCTTCGCGCTC TERM 51 49146 - 49190 + G 72 -8.6 -3.96892 | gap 1, opp_overlap 49145 49147, overlap 49135 49147 49149 ATAGCGACGACGAAG AGACGTCTGGCTATGTCGTCG TGTT CGACGATATCTCC-GACGTCA TTTCTGCTCAGCGTT Bphy_0041 47612 - 50023 + | integral membrane sensor signal transduction histidine kinase TERM 52 50444 - 50487 + G 70 -13.8 -2.62184 | gap 1, overlap 50456 50472 ATGGCGGCGAACGCG TCCGCAGTCG-CGTCGGCGGC GGC GCTGCCGATGATGTCCGCGGA TAGTCTGGGCGGCGG Bphy_0042 50024 - 50713 + | two component Fis family transcriptional regulator TERM 53 50883 - 50911 + F 95 -14 -4.39166 | gap 1 GGCCACCAGGATTCA GCCCCAGGAAATC GCAA GATT-CCTGGGGC TTTTCCTATGTGCGG TERM 54 51014 - 51041 + F 83 -5.6 -4.99134 | opp_overlap 51014 ATCGCGCTGTATCAA GGACTTGCCA TATGTTCT TCGCAAGTCC TTTTTCGTTTCAGGT Bphy_0043 51253 - 51984 + | exsB protein TERM 55 52107 - 52123 + G 73 -5.8 -4.4017 | gap 1, overlap 52107 52108 GGGCGAGGGCGCTAA CG-CCGG ACGT CCGGCCG TTTTCTGCCGGTTCG Bphy_0044 52054 - 52686 + | radical SAM domain-containing protein Bphy_0045 52693 - 53139 + | queuosine biosynthesis protein QueD TERM 56 53715 - 53748 + G 75 -11.8 -3.48276 | GTGGCGTCGCTAGCG TCGTGCGCGCA-GCCG CTTA CGGCATGCG-GCGCGA TTATCTGCAGAACGC Bphy_0046 53327 - 54109 + | 2-dehydro-3-deoxyglucarate aldolase TERM 57 54630 - 54616 - g 72 -7 -4.30719 | overlap 54618 GTCTGGTACAAGAAA GCGGCC GAG GGCGGC GACATGACGGCTCAG Bphy_0047 54106 - 54816 + | Sel1 domain-containing protein TERM 58 54816 - 54849 + T 100 -12.5 -4.50058 | opp_overlap 54821 54822, overlap 54821 54822 AGCAAAGCCGCAATG AAAAACGGCGCCTGA ACTT TCAGGCGCCATTTTG TTTTGCTTCTCGCTG TERM 59 54821 - 54844 + T 100 -12.4 -5.19998 | opp_overlap 54821 54822, overlap 54816 54822 AGCCGCAATGAAAAA CGGCGCCTGA ACTT TCAGGCGCCA TTTTGTTTTGCTTCT TERM 60 54844 - 54821 - T 100 -14.6 -4.86621 | opp_overlap 54821 54816 54822, overlap 54822 AGCCGCAATGAAAAA CGGCGCCTGA ACTT TCAGGCGCCA TTTTGTTTTGCTTCT TERM 61 54822 - 54843 + T 100 -15.9 -3.69559 | opp_overlap 54821 54822, overlap 54821 54816 GCCGCAATGAAAAAC GGCGCCTGA ACTT TCAGGCGCC ATTTTGTTTTGCTTC TERM 62 54843 - 54822 - T 90 -15.9 -3.5125 | opp_overlap 54822 54821 54816, overlap 54821 GCCGCAATGAAAAAC GGCGCCTGA ACTT TCAGGCGCC ATTTTGTTTTGCTTC Bphy_0048 56023 - 54875 - | rod shape-determining protein RodA TERM 63 56052 - 56085 + r 86 -16.1 -2.70932 | gap 1, opp_overlap 56057, overlap 56057 56061 CTCGTCGATGCCGCC GGAAACG-GGGCCGCG CGG CGCGGCTTGCGTTTCC TCGTTGCGCGACGGC TERM 64 56057 - 56080 + r 72 -8.8 -3.84246 | gap 1, opp_overlap 56057, overlap 56052 56061 CGATGCCGCCGGAAA CG-GGGCCGCG CGG CGCGGCTTGCG TTTCCTCGTTGCGCG Bphy_0049 58436 - 56034 - | penicillin-binding protein 2 TERM 65 56061 - 56075 + g 77 -12.8 -3.31817 | opp_overlap 56057, overlap 56057 56052 GCCGCCGGAAACGGG GCCGCG CGG CGCGGC TTGCGTTTCCTCGTT TERM 66 56105 - 56138 + g 91 -16.7 -3.65199 | gap 1, overlap 56099 TGCGCGACGGCGCGG CTGCGACCGGCC-GCG ATT CGCTGGCCGGTCGGGG TTTGCGTGGGGACTT TERM 67 56457 - 56488 + g 74 -10.8 -3.76224 | gap 1 CTCACCGCTGGGCGC CGTCGGCGCGCTGCC GAT GACGG-GTGCCGACG TTTCCTCCGTCGCCG TERM 68 58557 - 58547 - R 74 -8.2 -4.11216 | opp_overlap 58550, overlap 58548 TCGTGAGCGGGAAAA CGGC GCG GCCG TCAGATGGGCCGCGT Bphy_0050 59070 - 58558 - | rod shape-determining protein MreD Bphy_0051 60170 - 59067 - | rod shape-determining protein MreC TERM 69 60252 - 60236 - R 95 -13.7 -3.97368 | CGCCCAACGCACAAA GGCTGGC AAA GCCAGCC TGTCAGTGCGCATTG Bphy_0052 61332 - 60289 - | cell shape determining protein MreB TERM 70 61165 - 61180 + g 70 -2.5 -4.66833 | overlap 61165 CTTTGCTTCCTTCCC GACCG CCTGAA TGGTC TTTTTGCCATTCGGG Bphy_0053 61712 - 62011 + | glutamyl-tRNA(Gln) amidotransferase, C subunit TERM 71 62144 - 62124 - f 83 -13.9 -3.57144 | opp_overlap 62122 62136 GGCCGGATGCCCAAA CGGCGGCGC ACT GCGCCGTCG CGCTTTCCAGGAAAA TERM 72 62671 - 62704 + G 77 -13.1 -3.34962 | gap 1 CGCCGCGACGGGCAC CGACACGGGCGGATCG ATC CG-TCAGCCCGCGTCG TTCTCGGGTATCACG Bphy_0054 62165 - 63658 + | glutamyl-tRNA(Gln) amidotransferase, A subunit TERM 73 64328 - 64305 - g 81 -7.4 -4.56597 | overlap 64308 CCCGTGGGGCAAAAA GAATTCGGCA CGCG CGCCGAAATC AAGAACCTGAACTCG TERM 74 64325 - 64308 - g 78 -7.7 -4.40561 | overlap 64305 GTGGGGCAAAAAGAA TTCGGCA CGCG CGCCGAA ATCAAGAACCTGAAC Bphy_0055 63660 - 65135 + | glutamyl-tRNA(Gln) amidotransferase, B subunit TERM 75 65184 - 65229 + F 75 -5.4 -4.57073 | overlap 65176 65178 65188 GCTGCGTGCCAGGCT GTGA-CGGGCTGTTGTCGCATC GAAA GTCGCG-CAACGGCCCGTTTGC TTTTTCACCGGGATA TERM 76 65188 - 65224 + F 85 -10.8 -4.32046 | gap 1, overlap 65176 65178 65184 CGTGCCAGGCTGTGA CGGGCTGTTGTCGCATC GAAA GTCGCG-CAACGGCCCG TTTGCTTTTTCACCG TERM 77 65361 - 65371 + G 72 -8.2 -4.08216 | CTGGCGTCGATCCGT CGGC GAA GCCG TTTTCGACGGGATCG Bphy_0056 65270 - 66106 + | hypothetical protein TERM 78 66175 - 66148 - f 74 -2.6 -4.9445 | overlap 66151 ACAATGAAGGAAAAA CATGTTGCGCGT GATC ACGGCCAACCTG AACGGCATCCGTTCG Bphy_0057 66149 - 66928 + | exodeoxyribonuclease III Xth Bphy_0058 68167 - 66953 - | peptidase M48 Ste24p TERM 79 67380 - 67398 + g 74 -10.3 -3.72576 | CGCTCGCGTGCATGC TCGCGCA ACGCA TGCGCGA TTTCATGGCCGAGCA Bphy_0059 69561 - 68167 - | major facilitator transporter TERM 80 68316 - 68278 - G 72 -8.8 -3.96148 | gap 1 CTTTGTGACGAGAAA GCCG-CTTGCCGCGGAC GCCAGT GTGCGCGGCACGGCAGC CAGCGACGTGAACAG TERM 81 69509 - 69474 - G 79 -11 -3.83324 | opp_overlap 69473 69470, overlap 69475 69477 CGAGAAAGACGCAAA TCAGCATGCGCGCGTT GAGA AACGCGCGCCAGCCGG GATGTTCTTCGTGTG TERM 82 69508 - 69475 - G 77 -14.5 -2.89271 | opp_overlap 69473 69470, overlap 69474 69477 GAGAAAGACGCAAAT CAGCATGCGCGCGTT GAGA AACGCGCGCCAGCCG GGATGTTCTTCGTGT TERM 83 69506 - 69477 - G 71 -13.5 -2.98471 | opp_overlap 69473 69470, overlap 69475 69474 GAAAGACGCAAATCA GCATGCGCGCGTT GAGA AACGCGCGCCAGC CGGGATGTTCTTCGT Bphy_0060 70183 - 69575 - | methionine biosynthesis protein MetW Bphy_0061 71325 - 70180 - | homoserine O-acetyltransferase TERM 84 71525 - 71500 - R 79 -12.7 -3.28712 | gap 1 CGGCGCGTTGTACAA GCTGTGACCGTC ATG GACGGTCA-AGC GCAGAGTATATCGGA Bphy_0062 72267 - 71569 - | TetR family transcriptional regulator TERM 85 72089 - 72127 + g 76 -6 -4.56133 | opp_overlap 72071 72069, overlap 72093 72095 TAGAGCGCCGCCTCC GATACGCCGAGGC-GCGC GGCCA GCGCCGCCGTGGTG-ATC TTTTCGTTCTTCGGC Bphy_0063 73062 - 72304 - | pyrimidine 5'-nucleotidase Bphy_0064 74161 - 73262 - | acetylglutamate kinase Bphy_0065 74476 - 74751 + | hypothetical protein Bphy_0066 76426 - 74789 - | TPR repeat-containing protein TERM 86 76411 - 76396 - G 70 -6.2 -4.26461 | opp_overlap 76396 AGGAATCCAAAAGAA CTTGAT GTGG ATCAAG TGATGTGTTGAGCAT TERM 87 77227 - 77206 - g 72 -13 -3.08996 | GATGCTCACGGAAGA GCTGCGCG ACGCCG CGCGCAGC GACGAGGGCCTCAAG TERM 88 77732 - 77750 + G 72 -13.1 -3.09968 | opp_overlap 77732 77731 77727, overlap 77726 GTCAACGAAACCAAG CCGCGCG GCACG CGCGCGG TGTTGCGGTTGCCTC TERM 89 77809 - 77781 - g 84 -13.2 -3.72576 | overlap 77782 77785 TGGCCCGCGAGCAAA CGGACGCGG-GCCG GCA CGGCGCCGCGT-CG TCCAACACGGAGAAA TERM 90 77806 - 77785 - g 71 -13.7 -2.67803 | gap 1, overlap 77781 77782 CCGCGAGCAAACGGA CGCGG-GCCG GCA CGGCGCCGCG TCGTCCAACACGGAG Bphy_0067 76529 - 77833 + | integral membrane sensor signal transduction histidine kinase Bphy_0068 77830 - 78372 + | two component Fis family transcriptional regulator TERM 91 78400 - 78431 + T 100 -21.6 -3.90744 | opp_overlap 78402, overlap 78402 ACATGGCGCATGAAG AAGGGCGGCGCTCC TCGC GGAGCGCCGCCCTC TTGTTTGGCCGGCCC TERM 92 78429 - 78402 - T 100 -24.2 -3.72027 | opp_overlap 78400 78402 ATGGCGCATGAAGAA GGGCGGCGCTCC TCGC GGAGCGCCGCCC TCTTGTTTGGCCGGC TERM 93 78402 - 78429 + T 100 -24.2 -3.54488 | opp_overlap 78402, overlap 78400 ATGGCGCATGAAGAA GGGCGGCGCTCC TCGC GGAGCGCCGCCC TCTTGTTTGGCCGGC Bphy_0069 79798 - 78455 - | heat shock protein HslVU, ATPase subunit HslU TERM 94 79438 - 79452 + g 75 -10 -3.84451 | GGTCTTCGGCCTTCG TGCGCA TCT TGCGCA TTTCGGTTTCGCGCG Bphy_0070 80344 - 79808 - | 20S proteasome A and B subunits TERM 95 80667 - 80642 - R 100 -16.9 -5.79595 | opp_overlap 80662 CCTGAAAAGAAAAAA GAGGCGCACGA ATCA CCGTGCGCCTC TGACGAAGCGTATCT Bphy_0071 81137 - 80718 - | TraR/DksA family transcriptional regulator TERM 96 81649 - 81662 + r 80 -2.3 -5.22039 | TTAATTGCCGCGTTT GTGCT TTTG AGCTC TTTTTTGCCTTTCCA Bphy_0072 82840 - 81752 - | cobalamin synthesis protein P47K TERM 97 81809 - 81830 + g 81 -5.2 -4.88067 | CGGCAGTTCGATGCC GATGAACA CCATCT TGTTCGTC TTTTTCTCGATGGGT Bphy_0073 84208 - 83006 - | PUA domain-containing protein TERM 98 83119 - 83141 + g 73 -14.8 -2.52742 | overlap 83118 83116 GCGCATCGACCCGTG CGTCGGCGGC CGC GCCGGCGACG ATCTTCTGGAACAGT Bphy_0074 85217 - 84294 - | tyrosine recombinase XerC Bphy_0075 85947 - 85228 - | hypothetical protein Bphy_0076 86894 - 86034 - | diaminopimelate epimerase TERM 99 86858 - 86872 + g 73 -5.6 -4.33165 | opp_overlap 86857 GCACGACGAAGTCAT TGCCCG CGC CGTGCA TTTTGGTGAATTTCA TERM 100 86973 - 86958 - R 71 -6.8 -4.25104 | gap 1, opp_overlap 86924 CGCGCTTCAGTAAAA GCTCGGG TCG CCCG-GC GGGCGAGTCTTGAAG Bphy_0077 87833 - 86949 - | lipid A biosynthesis acyltransferase TERM 101 88876 - 88900 + G 74 -12.7 -3.28791 | CGATACGTACGGCGG CGCGGCTCCGC ACG GCGGCGGCGCG TTCTCGGGCAAGGAT TERM 102 89212 - 89178 - g 100 -9.8 -5.15634 | opp_overlap 89195 CAGTCTATGAAAAAA CGGCCGCCTACGGCCA CTT CGGCCGCGAGGAGCCG GAATTCTCGTGGGAA Bphy_0078 88106 - 89293 + | methionine adenosyltransferase TERM 103 89361 - 89388 + T 100 -19.2 -5.67063 | opp_overlap 89361 GGCCGCAAAGAAAAA CGCCCTGCATGC GAAC GCATGCGGGGCG TTTTTTTCTGATGCG TERM 104 89388 - 89361 - T 100 -17 -5.27335 | opp_overlap 89361 GGCCGCAAAGAAAAA CGCCCTGCATGC GAAC GCATGCGGGGCG TTTTTTTCTGATGCG Bphy_0079 89803 - 89507 - | hypothetical protein TERM 105 89687 - 89647 - G 79 -15.3 -3.01791 | ACGGCGTGCGCAATA GCGTGCGCAGAGCCAGACG CGG CGTCGCGCCCTGCACGCGC AGCGCGCTGAAGAAC Bphy_0080 90294 - 91055 + | phytanoyl-CoA dioxygenase TERM 106 91068 - 91107 + T 73 -12 -3.01924 | gap 1 TGAACCCCTTGTCCC GCCGCTGGC-CGGGGCCGC TAT GCGGCGGCGCGTCAGCGCC TGTTCGACGCGAGTC Bphy_0081 91300 - 91100 - | hypothetical protein TERM 107 91994 - 92014 + G 79 -6.1 -4.63486 | AGTCTGCAGCGCATG GGTCTCGAC TAC GTCGACATC TTTTATTCGCACCGT Bphy_0082 91610 - 92653 + | aldo/keto reductase TERM 108 92705 - 92688 - T 100 -9.8 -5.37043 | opp_overlap 92688 ATGCGAGATAAAAAA GCCGCC CATGTT GGCGGC TTTTTCAATGGTGCG TERM 109 92688 - 92705 + T 87 -9.8 -4.68593 | opp_overlap 92688 ATGCGAGATAAAAAA GCCGCC CATGTT GGCGGC TTTTTCAATGGTGCG Bphy_0083 92947 - 92765 - | hypothetical protein TERM 110 93041 - 93052 + r 71 -7.2 -4.11216 | overlap 93030 GTTTGGCTGGCTGCA GCGC GCCC GCGC TTTTGCCCGTCGCGC TERM 111 93096 - 93143 + r 73 -11.9 -3.07307 | opp_overlap 93089 93088, overlap 93107 93108 GGGACAAGGCTTTGC GCGG-TTCGCACAGCGGCGCAAG GGGG CTCGCGCCGC-GAGCGCGTCCGC TTACGTCGACCTTTC Bphy_0084 94488 - 93217 - | major facilitator transporter TERM 112 93391 - 93402 + gr 74 -7.2 -4.323 | GAGCAGGTACAGCGC GGCC GCCT GGCC TTTTGCCTCTTTCGC TERM 113 94401 - 94362 - GR 73 -12.6 -2.73994 | overlap 94359 ATCCGGCGAACAGCA GCGCGAGACTGGCGCGCC AGTA GGCGCGCGTGCCGCGCTC GAGATATGGCGCGCC Bphy_0085 95173 - 94454 - | hypothetical protein Bphy_0086 95551 - 95763 + | hypothetical protein Bphy_0087 95889 - 96911 + | aminoglycoside phosphotransferase Bphy_0088 97214 - 97378 + | hypothetical protein Bphy_0089 98517 - 97489 - | hypothetical protein TERM 114 97689 - 97656 - GT 78 -9.4 -4.03234 | opp_overlap 97656, overlap 97657 TGCTGCCGATATAAA TCCCTACCGGCCCG TGCAGC CGGGCCAGCTGGGC TTCCGTGAGATCGAA TERM 115 97688 - 97657 - GT 74 -12.9 -3.01726 | opp_overlap 97656, overlap 97656 GCTGCCGATATAAAT CCCTACCGGCCCG TGCAGC CGGGCCAGCTGGG CTTCCGTGAGATCGA Bphy_0090 99071 - 98490 - | carbon monoxide dehydrogenase subunit G TERM 116 98590 - 98605 + gr 80 -10.4 -3.95073 | GACTGGCTTGCAGTG TCGCCG GAAT CGGCGA TTTCTGCCTGTGCGG Bphy_0091 100297 - 99062 - | VWA containing CoxE family protein Bphy_0092 101193 - 100303 - | ATPase TERM 117 101291 - 101269 - R 77 -11.9 -3.61646 | opp_overlap 101271, overlap 101265 AACCCGATAAACGAA GCGGCCCGG ACGCG CCGGGCCTC ATGTCGGTCAAACGC TERM 118 101271 - 101289 + r 71 -13.1 -2.64616 | opp_overlap 101269 101265 CCCGATAAACGAAGC GGCCCGG ACGCG CCGGGCC TCATGTCGGTCAAAC Bphy_0093 102124 - 101327 - | carbon-monoxide dehydrogenase (acceptor) Bphy_0094 104524 - 102137 - | aldehyde oxidase and xanthine dehydrogenase molybdopterin binding TERM 119 103076 - 103123 + g 88 -17.6 -3.12351 | gap 1, opp_overlap 103069 103071, overlap 103072 TTCGAACAGACCCGC GCGTGCGCCCAGCGCGCCCGCGA TGT TCGATGGCGCGA-GGCCGCACGC TTCGATGTAGCACGA TERM 120 103659 - 103686 + g 89 -2.6 -5.40072 | AACGCTTCGGAGCGC TCGGCGGTCC ACTTCACG GGACGGCGGA TTTTTTTCGACGCCC Bphy_0095 105036 - 104536 - | 2Fe-2S iron-sulfur cluster binding domain-containing protein TERM 121 105329 - 105346 + r 80 -4.7 -4.92239 | overlap 105322 105321 GACGCAATGAGGGCC GCGTGGC GTGG GCTTCGC TTTTTCGGTTTTTCG Bphy_0096 106821 - 105421 - | amino acid permease-associated region TERM 122 106741 - 106753 + g 74 -4.7 -4.58395 | overlap 106742 AAAGGTGAGATCGAG CGCGC CGA GCGCC TTTTTCAGGCCTGCA Bphy_0097 107615 - 106959 - | two component LuxR family transcriptional regulator TERM 123 107015 - 107041 + g 73 -5.9 -4.4009 | gap 1, opp_overlap 107015 107014, overlap 107018 TCATCACATAAAAGG TG-AGCTCCGCA TTGT TGCGCAGCTTCA TTTTCTCGAGTAGCC Bphy_0098 108543 - 107677 - | histidine kinase TERM 124 108305 - 108357 + g 71 -12.6 -3.18383 | gap 2, opp_overlap 108292 108293, overlap 108306 108310 AAGCGCGCGGCCGTG ACCTCGGCGCCGAGGCTGTCGTGCAG TTC CTGCGCGAC-GCGGCGGCG-CGTGGC TTCCTGCGTGCGCGT TERM 125 108306 - 108356 + g 77 -16.1 -2.50816 | gap 2, opp_overlap 108292 108293, overlap 108305 108310 AGCGCGCGGCCGTGA CCTCGGCGCCGAGGCTGTCGTGCAG TTC CTGCGCGAC-GCGGCGGCG-CGTGG CTTCCTGCGTGCGCG TERM 126 108310 - 108353 + g 74 -15.2 -2.57244 | gap 1, opp_overlap 108292 108293, overlap 108306 108305 CGCGGCCGTGACCTC GGCGCCGAGGCTGTCGTGCAG TTC CTGCGCGAC-GCGGCGGCGCG TGGCTTCCTGCGTGC TERM 127 109023 - 109004 - R 100 -15 -5.61881 | opp_overlap 109004 109018 109020, overlap 109017 CCGCAAAAAGAAAAA CCGGAGCC TAAA GGCTCCGG TTTCCGGTGTTTCGA TERM 128 109004 - 109023 + r 95 -15 -3.695 | opp_overlap 109004 109017, overlap 109018 109020 CCGCAAAAAGAAAAA CCGGAGCC TAAA GGCTCCGG TTTCCGGTGTTTCGA Bphy_0099 109860 - 109090 - | oxidoreductase FAD-binding subunit TERM 129 109914 - 109904 - R 84 -2.4 -5.36441 | overlap 109887 109886 CGGCCACACAAAAAA GCGG GGC CGGC ACGGCAAAGGCGATG Bphy_0100 111022 - 110381 - | lysine exporter protein LysE/YggA TERM 130 111338 - 111356 + r 73 -11.8 -3.06133 | overlap 111341 CCGGCACTTCAGTGG TAATCGGC CGT GCCGATTA TTCCATCGAAAATTA TERM 131 111881 - 111866 - R 70 -11.8 -2.78867 | opp_overlap 111862 111857, overlap 111865 TCAACGCCGAAGAAG GCGCGC GCGA GCGCGC GGGCTACCGTTTGCT TERM 132 111966 - 111930 - R 71 -11.4 -3.17392 | CAGCGCCGAACTCAA CCGGACGCCGCAGCGC GACTG ACGCCGCGGCGCGCGC TCACTCGACGCGCAG Bphy_0102 112764 - 111967 - | endonuclease/exonuclease/phosphatase Bphy_0103 113299 - 112793 - | hypothetical protein Bphy_0104 113629 - 114606 + | ATPase central domain-containing protein TERM 133 114637 - 114650 + F 72 -9.5 -3.73647 | TGAGGCGAACGGGCG GCGCG CAAG CGCGC TTGTTCATGGGTCCA Bphy_0105 114837 - 115124 + | hypothetical protein TERM 134 115241 - 115268 + F 93 -12.7 -4.17296 | opp_overlap 115237 GTTCCCACATATTGA TGCCCGCAGCC GGAACA GTCTGCGGGCA TTTGTGTCTGTGGCG TERM 135 115945 - 115959 + G 75 -9.2 -3.96624 | opp_overlap 115944 115941 GTAGAAGCAATCGAG GCGGTC AAC GGCCGC TTTGTGGTCAAGGTC TERM 136 116367 - 116394 + G 71 -12.6 -3.21099 | TATTCGTCCCAAGCT GTCGGGGCCGGG CGAG CCCGCCGCCGAC TTCCTGATACAAGGG Bphy_0106 115417 - 116523 + | 2-hydroxyglutarate dehydrogenase Bphy_0107 116726 - 117040 + | high potential iron-sulfur protein TERM 137 117153 - 117123 - gf 100 -19.7 -3.58343 | opp_overlap 117123 CGCAGCAGCCGTAAA GAGCGCCCGCCGC GGAGA GCGGCGTGCGCTC TTGTCTTATGAAAGT TERM 138 117123 - 117153 + GF 100 -19.7 -3.75378 | opp_overlap 117123 CGCAGCAGCCGTAAA GAGCGCCCGCCGC GGAGA GCGGCGTGCGCTC TTGTCTTATGAAAGT Bphy_0108 117052 - 117351 + | hypothetical protein TERM 139 117697 - 117720 + GT 75 -9.5 -3.85698 | opp_overlap 117713, overlap 117713 GTTCGGCAGTTCGAC GGCGCTGCT GATCGA AGCCGCGCC TTTCTCGAAGCGCGG TERM 140 117736 - 117713 - gT 73 -11.7 -3.05384 | opp_overlap 117697 117713 GCGCTGCTGATCGAA GCCGCGCCT TTCTCG AAGCGCGGC TTCTATGGCAGTTGG TERM 141 117713 - 117736 + GT 71 -10.2 -3.50447 | opp_overlap 117713, overlap 117697 GCGCTGCTGATCGAA GCCGCGCCTT TCTC GAAGCGCGGC TTCTATGGCAGTTGG TERM 142 117948 - 117976 + GT 74 -11.5 -3.53811 | opp_overlap 117948, overlap 117950 TGCACGCGAAGCAGA CCGCGCGCCGCGC GAC GCTCGGCGAGCTG TTTGCGCACCATAGC TERM 143 117950 - 117974 + GT 79 -12.7 -3.34715 | opp_overlap 117948, overlap 117948 CACGCGAAGCAGACC GCGCGCCGCGC GAC GCTCGGCGAGC TGTTTGCGCACCATA TERM 144 118222 - 118241 + GT 73 -5.6 -4.3586 | GTCGCTGGTCATCAC GCTGGTGG CGAT CTACCCGC TTTTCGTGTGGCTGG Bphy_0109 117293 - 118615 + | general substrate transporter Bphy_0110 120133 - 118619 - | amidase TERM 145 119216 - 119192 - G 70 -7.9 -4.00782 | gap 1, opp_overlap 119191 CCAGATCATCAGAAA CG-CTTCGCG CAGGCT CGCGAAGTCG ATGTTGAGCGTGACG TERM 146 119461 - 119427 - G 85 -16.5 -3.08679 | gap 1 TTGCCCGACGTAAGA TCGAGCAGCAGTGCGC TGTC GCGCAC-GCTGCGCGA CACGGCGTGATCGAC TERM 147 119915 - 119945 + g 72 -8.9 -3.97368 | gap 1, opp_overlap 119885, overlap 119903 119915 119911 119935 119938 CGGCCCGTCGCCGAG C-GCAGCGGCGTCG GGTG CTTCGCCGCTGCCG TTTGTCCGTTCGCGC TERM 148 120258 - 120235 - R 83 -13.8 -3.36803 | opp_overlap 120228 CAATTCGATGCACAA GGCGCGACGC CGGC ACGCCGCGCC TCTAGCGTAACTTAC Bphy_0111 120968 - 120270 - | carboxymethylenebutenolidase TERM 149 121086 - 121066 - H 74 -8.1 -4.25256 | overlap 121063 121067 GTGCCATCAAAAGAA CGGGCCTGC AGC GCGGGGCCG GCGCGGCGGGCTCCT TERM 150 122675 - 122655 - g 72 -11.1 -3.55444 | GTGTGATCGGCGAAA CGACCTTCG ACT CGAAGGGCG ACCTGAAGCACGGTG Bphy_0112 121607 - 122752 + | extracellular ligand-binding receptor TERM 151 122833 - 122858 + F 100 -17.6 -5.18371 | opp_overlap 122830 122833 CAAGGCATCATAGGA GGCACGCGGG TTCATT CCCGCGTGCC TTTTGTTTTGTGCGC TERM 152 122858 - 122833 - f 87 -17.6 -2.67441 | opp_overlap 122833, overlap 122830 CAAGGCATCATAGGA GGCACGCGGG TTCATT CCCGCGTGCC TTTTGTTTTGTGCGC Bphy_0113 122916 - 123914 + | transcription factor jumonji domain-containing protein Bphy_0114 125161 - 123950 - | major facilitator transporter TERM 153 124376 - 124361 - G 71 -11.8 -3.28924 | overlap 124335 CATGCCGCCTGAGAA CGCCGC GTAG GCGGCG CTCGACACAGCGGGC TERM 154 125980 - 125961 - g 74 -11.4 -3.59979 | GTCGGGTAGCCGAAA GCGCGTCG CGTT CGACACGC CAGCTCCCGATTGGG Bphy_0115 125383 - 126048 + | pyridoxamine 5'-phosphate oxidase-related FMN-binding Bphy_0116 126407 - 126709 + | histone family protein nucleoid-structuring protein H-NS TERM 155 126706 - 126692 - f 79 -7.2 -4.60487 | opp_overlap 126692 CAGGAGCGGGAAAAA TTTCTC ATC GAGAAA TAATATGACTTAATG TERM 156 126745 - 126785 + F 71 -11.4 -3.22223 | opp_overlap 126749 126754, overlap 126754 GCGCGAGCAATGTGT TAAAGAAAACCGCGCC-CAC ATC GAGAGGCGCGGTTTT-TTTA TTGGTCATCGGCTTA TERM 157 126782 - 126749 - f 71 -10.3 -3.58037 | gap 1, opp_overlap 126745 126754, overlap 126754 GAGCAATGTGTTAAA GAAAACCGCGCC-CAC ATC GAGAGGCGCGGTTTTT TTATTGGTCATCGGC TERM 158 126777 - 126754 - f 95 -10.2 -4.87133 | gap 1, opp_overlap 126745 126754, overlap 126749 ATGTGTTAAAGAAAA CCGCGCC-CAC ATC GAGAGGCGCGG TTTTTTTATTGGTCA TERM 159 126754 - 126777 + F 100 -10.2 -5.84381 | gap 1, opp_overlap 126754 126749, overlap 126745 ATGTGTTAAAGAAAA CCGCGCC-CAC ATC GAGAGGCGCGG TTTTTTTATTGGTCA Bphy_0117 126957 - 128159 + | cation diffusion facilitator family transporter Bphy_0118 128627 - 128169 - | AsnC family transcriptional regulator TERM 160 128641 - 128651 + r 74 -2.4 -4.91459 | AACTGCGCCTCCGTT GTCG CGT CGCC TTTTTATCAATGTTA Bphy_0119 129345 - 128731 - | hypothetical protein Bphy_0120 129986 - 129342 - | beta-lactamase domain-containing protein TERM 161 130120 - 130131 + H 76 -4.4 -4.83269 | opp_overlap 130120 AGTTGAGGTAGAGAA CACA GGAT TGTG TTTTTGGTATAATGT Bphy_0121 130629 - 131228 + | rare lipoprotein A TERM 162 131295 - 131276 - Tf 100 -13.6 -5.00616 | opp_overlap 131276 CGTCTGCTTAAAAAA GGGCTGTG TGCG CACAGCCC TTTTTGCTTTTTCAA TERM 163 131276 - 131295 + TF 100 -13.6 -5.18355 | opp_overlap 131276 CGTCTGCTTAAAAAA GGGCTGTG TGCG CACAGCCC TTTTTGCTTTTTCAA Bphy_0122 132182 - 131307 - | uroporphyrin-III C/tetrapyrrole methyltransferase TERM 164 132328 - 132366 + GH 76 -13.1 -3.14931 | overlap 132315 132309 132329 132358 GGGGCGGCGTTCGAG GCGCGGGCGCTGACGTT TCTTC AGCGGCAGCGTTTGCGC TTCGTCGCGCGTAAC TERM 165 132329 - 132359 + GH 78 -11 -3.67976 | overlap 132315 132309 132328 132358 GGGCGGCGTTCGAGG CGCGGGCGCTGACG TTT CTTCAGCGGCAGCG TTTGCGCTTCGTCGC TERM 166 132524 - 132539 + GH 93 -5.4 -5.24129 | gap 1, opp_overlap 132513, overlap 132513 AGCAGCAGCGCATCG TGC-GCG CCG CGCAGCA TTTTTTGTCGACGCA Bphy_0123 132181 - 132651 + | hypothetical protein Bphy_0124 132877 - 133464 + | phosphoheptose isomerase Bphy_0125 133485 - 134288 + | transport-associated Bphy_0126 134285 - 134632 + | cytochrome c class I TERM 167 135144 - 135133 - g 86 -3.6 -5.14563 | GTGCTCAGCAAAAAA GGCC CCAA AGCC GCGCAGACCCGCTTC TERM 168 135925 - 135971 + G 79 -11.4 -3.86015 | CACGGCCTGGCCGCG CTCGCGGGCGACCTGATCGCGA TCG TCGCGGTGCTGTTGCTCGCGCG TTTCTGGAGCGACTG Bphy_0127 134929 - 136038 + | hypothetical protein TERM 169 136950 - 136910 - g 77 -13.1 -3.30159 | CGAAGTCTGCGACAA GCTCGACGGCGCAGCCGAC GGC ATCGTCAGCGACGTCGCGC AATGCCGTCAGCACG Bphy_0128 136035 - 137750 + | feruloyl esterase TERM 170 137793 - 137772 - f 70 -3.7 -4.59081 | gap 1 CAAAGTCAGACAAAA CACTGCGGAT GGG AT-CGCGGTG CAAAGCTGTCGCGCA TERM 171 138852 - 138830 - g 81 -3.3 -5.00616 | TCGCGCTGCAAAAAA GCGGTTCGA GCATT TCGACTCGC ATCGCGAGCTAAGGT Bphy_0129 138001 - 138864 + | anti-sigma-factor antagonist Bphy_0130 138874 - 139230 + | anti-sigma-factor antagonist Bphy_0131 139250 - 139675 + | putative anti-sigma regulatory factor, serine/threonine protein kinase Bphy_0132 139660 - 140808 + | putative anti-sigma regulatory factor, serine/threonine protein kinase Bphy_0133 140895 - 142343 + | histidine kinase Bphy_0134 142340 - 143983 + | histidine kinase TERM 172 144293 - 144346 + G 78 -3.8 -4.83169 | gap 2, opp_overlap 144273, overlap 144298 AAGACGGCGATCCGC ATCATGCTCACGTCGCGCCAGCCGAT CTGG ATCGGCTGG-G-GACGGGAGCTTCTC TTTTTCTACAACGAT TERM 173 144298 - 144341 + G 95 -16.9 -4.13816 | gap 2, opp_overlap 144273, overlap 144293 GGCGATCCGCATCAT GCTCACGTCGCGCCAGCCGAT CTGG ATCGGCTGG-G-GACGGGAGC TTCTCTTTTTCTACA TERM 174 147571 - 147616 + G 91 -17 -3.53012 | gap 3 TGTGCGCAACGCGCT CGCGGGC-GTTGCG-CGCGGCGC GAA GC-TCGCGTCGCAACTGCTCGCG TTTGGCCGCAGACAG TERM 175 148859 - 148874 + G 72 -6.8 -4.25283 | overlap 148860 GCCACCGGCCGCGAA TCGCGC CTTC GCGTGA TTTTCGTCACGGGCT Bphy_0135 144107 - 149002 + | multi-sensor hybrid histidine kinase TERM 176 149212 - 149189 - g 81 -13.8 -3.53012 | opp_overlap 149173 149197, overlap 149170 GCGCTGGCCGTCAAA GCCGCCACCG GGCG CGACGGCGGC GCGTCCGTTCTGATC TERM 177 149197 - 149219 + G 75 -12.6 -3.52073 | opp_overlap 149170 149189, overlap 149173 CGTCAAAGCCGCCAC CGGGCGCGAC GGC GGCGCGTCCG TTCTGATCTTCGACG Bphy_0136 149102 - 149725 + | hypothetical protein TERM 178 149784 - 149757 - f 100 -14.2 -5.46629 | overlap 149747 AACAGGCGAAAAAAA TCCGCTCACGCC GGGG AGCATGAGCGGA AAGTCGGAGAGTTAC TERM 179 151542 - 151521 - g 88 -8.7 -4.68384 | gap 1, overlap 151523 AGTCACCCAACAAAA CGCCGCGCTC GTC GAGCA-GGCG GCGGCTGCGGCGGGC Bphy_0137 150067 - 151614 + | methyl-accepting chemotaxis sensory transducer TERM 180 151845 - 151832 - g 75 -3.7 -4.65895 | GCGTCCAGCCAAAAA GCGTC GAAG GGCGC GTCGTCAATATCGAC TERM 181 152634 - 152668 + G 74 -15 -2.63631 | CCTCGACGGCTACAT CGGTCGCGCGTTCATC GGC GATGGACTGGCGACCG TCCTCTCCGGCTTCG TERM 182 152958 - 152982 + G 70 -11.3 -3.36803 | GATCGTCGCGGCCGT GACGCTCGTGC TCG GCGCGGGCGAC TTCTCGCTGAAGTTC Bphy_0138 151789 - 153096 + | uracil-xanthine permease TERM 183 153120 - 153141 + T 100 -14.4 -5.68023 | opp_overlap 153120 ATGCACGAAACGAAA CGGGCGCC CATCGC GGCGCCCG TTTTTTTGCTTCTAC TERM 184 153141 - 153120 - T 100 -14.4 -4.10953 | opp_overlap 153120 ATGCACGAAACGAAA CGGGCGCC CATCGC GGCGCCCG TTTTTTTGCTTCTAC Bphy_0139 154832 - 153168 - | Na+/H+ antiporter TERM 185 154012 - 154064 + g 74 -14.8 -2.57974 | gap 1, overlap 154011 TCGATCATCGTCCAC GTGACGCTCGCTCGCACGCGCGCCT CTGC AGG-GCTCGTGCGCGCGAACGTCGA TAAGTTCATCGTCAT TERM 186 154942 - 154914 - H 72 -8.8 -3.83026 | overlap 154930 154932 TCGCGCGACATGAAA GCGCCGCGTC TGGAAAGAC GATGCGGCGC GTCGGTCAGCCCGAA Bphy_0140 155217 - 156491 + | diguanylate phosphodiesterase TERM 187 156988 - 157005 + G 72 -11.3 -3.55447 | GGTTGCGAATGTCTT GACCTCC GGTG GGAGGTC TTCTGTGCTCGATGC Bphy_0141 156536 - 157225 + | CutC family protein Bphy_0143 161189 - 157599 - | pyruvate ferredoxin/flavodoxin oxidoreductase TERM 188 159052 - 159086 + g 70 -5.7 -4.20918 | overlap 159085 GCGTCGACGCATGTG GCGAGC-GCCGCTGCAT CGA ATGCAACGCCCGC-CGC TTTCTTGAGCTTGCC TERM 189 159935 - 159962 + g 81 -9.2 -4.32857 | gap 1, opp_overlap 159935, overlap 159939 GTGCGACGAGATCAA CCACGCGCTCG CGCCGAT CGAGCGC-TGG TTTGTGTTTCGCGAG TERM 190 160077 - 160095 + g 80 -13.8 -3.31792 | opp_overlap 160070 GCCGAAGATCGCGGG CCGCGCGC CTT GCGTGCGG TTGTACAGATAGTCC TERM 191 161580 - 161563 - H 74 -6.3 -4.43669 | gap 1, overlap 161564 161567 AGCGAAAAAACCAAA GGCATCGC CGT GCGAT-CC AGGCTACCCTAATCG Bphy_0144 161632 - 162249 + | glutathione S-transferase domain-containing protein Bphy_0145 163218 - 162277 - | K+ channel inward rectifier domain-containing protein TERM 192 163247 - 163293 + r 73 -13 -2.85351 | gap 3, opp_overlap 163242 163241, overlap 163275 163277 163280 CGCTGACAAGTGTGT CG-CGCAGCGTCGCGGCG-CGAC CGTA GCCGACGCCGCC-CGCTGCGGCG TGTAGTGTAGCGCGG Bphy_0146 163610 - 163365 - | hypothetical protein TERM 193 163643 - 163677 + r 76 -12.8 -3.05384 | opp_overlap 163640 163639 CAGCAAGACAAGGTC GTAGGCGCGGCGCG CGGCGGA CGCGCCACGTCTGC TTCAATGCGAAAACC Bphy_0147 163953 - 163714 - | hypothetical protein Bphy_0148 165021 - 164095 - | ribokinase-like domain-containing protein TERM 194 164798 - 164752 - G 70 -11.6 -3.36289 | gap 2 CACGACGGCAAGCAA CGGCGCGCGCTCGACACGCTGC ATGAA GC-GCATGTCGAGACCG-GCCG CGACGCTTGCATTCC Bphy_0149 166302 - 165040 - | N-acylglucosamine 2-epimerase TERM 195 166250 - 166222 - G 78 -13.9 -3.24747 | gap 1, opp_overlap 166218 GTGCGACAGCAGGAA CGCCCCGTCGCG GAAGCT CGCGACGGG-CG GCGCCTTGTCATTGG Bphy_0150 167285 - 166299 - | LacI family transcription regulator TERM 196 166359 - 166412 + g 81 -14.4 -3.45118 | opp_overlap 166390 CGGTATGCGGATGTC GAGTGCGGACGGCGTGTCGTCGAG CAGCAA TTCGACGCCGCGCCGCCCGAGCGC TTCCTTGTCGACTGC TERM 197 166724 - 166701 - G 90 -16 -3.61398 | gap 1, opp_overlap 166690 CCCGGCTTCGAAGAA CGCGCGC-CGG TAG CCGAGCGCGCG CTGCGCGATGCTGTA TERM 198 167320 - 167293 - R 78 -6.2 -4.67353 | gap 1, opp_overlap 167313 167317, overlap 167295 GTAGCCATCGAAAAA GACGGCGGCGC AAGCAAG GCGCCGCAG-C GGAGTTCAGGTTCGG TERM 199 167319 - 167295 - R 78 -9.9 -3.95214 | opp_overlap 167313 167317, overlap 167293 AGCCATCGAAAAAGA CGGCGGCGC AAGCAAG GCGCCGCAG CGGAGTTCAGGTTCG TERM 200 167530 - 167472 - R 79 -13.2 -3.19653 | gap 3, overlap 167473 TGATAATTTCATGAA TCGGCGCGGCTCGCGATTGGCGCGTGCGG TGCG CCACACGCGCTAATCGGG-GC-G-GCCGT GAATCCGAATCTGAA TERM 201 167529 - 167473 - R 85 -16.7 -2.51471 | gap 3, overlap 167472 GATAATTTCATGAAT CGGCGCGGCTCGCGATTGGCGCGTGCGG TGCG CCACACGCGCTAATCGGG-GC-G-GCCG TGAATCCGAATCTGA Bphy_0151 169524 - 167683 - | diguanylate cyclase/phosphodiesterase TERM 202 169652 - 169666 + r 87 -7.8 -4.82154 | ACCCATCTGGGGTGG CGTACG ATG CGTGCG TTTTTCCTATGCCTT TERM 203 169729 - 169744 + r 77 -11.8 -3.54543 | opp_overlap 169729 TGAAATAACAACAAA GCCGCC CGCA GGCGGC TTTCCACGACTCACT TERM 204 169744 - 169729 - R 100 -11.8 -4.62803 | opp_overlap 169729 TGAAATAACAACAAA GCCGCC CGCA GGCGGC TTTCCACGACTCACT TERM 205 169806 - 169830 + r 75 -4.2 -4.82901 | gap 1, opp_overlap 169798, overlap 169808 169809 CGAAGCAGGCTTATC GCCGCG-CGAC AGCC GTCGTCGTGCC TTTTTGTGCAGCGCG Bphy_0152 170823 - 169801 - | bile acid:sodium symporter TERM 206 170928 - 170915 - H 75 -5.3 -4.69027 | AAAGCGATTGAAAAA GCAAA TTCA TTTGC CGAATTGATTAATTA Bphy_0153 171381 - 171995 + | hypothetical protein TERM 207 172284 - 172298 + F 71 -7.8 -4.08767 | opp_overlap 172275 172274 TAGAATCCGCGCCCG TCGCGG CGC TCGCGA TTTTGCGGCAATGCG Bphy_0154 172525 - 173628 + | porin TERM 208 173671 - 173697 + F 91 -13.1 -4.09628 | gap 1, opp_overlap 173671 GCGCCGCCTGTCAAA GCCCTG-GTTCC TCGC GGAACGCAGGGC TTGTTCTTTCGGCTG TERM 209 173697 - 173671 - f 81 -13.1 -3.53012 | gap 1, opp_overlap 173671 GCGCCGCCTGTCAAA GCCCTG-GTTCC TCGC GGAACGCAGGGC TTGTTCTTTCGGCTG TERM 210 174647 - 174671 + G 74 -4.9 -4.56597 | overlap 174614 174631 CGGCGAAGGTGCGCT CGTTCGTCGAT TTC ATCGCGGAGCG TTTTTCAAGCGAGCC Bphy_0155 173794 - 174732 + | LysR family transcriptional regulator TERM 211 176254 - 176287 + G 71 -13.1 -3.00766 | gap 1 GCGGCACTCGAGCGG CCGCAACGCGATCGTG CCG CCCGAGCGCG-TGCGG TATCTGTCGGATGTT TERM 212 177252 - 177270 + G 86 -3 -5.12068 | overlap 177242 177241 TTCAGGCGTACTTCG TCGAGCAC GGC GTGCGCAA TTTTTATTCGGTGTC Bphy_0156 174860 - 178243 + | methylmalonyl-CoA mutase, large subunit TERM 213 178260 - 178292 + T 84 -16.3 -2.60392 | opp_overlap 178265, overlap 178265 ATGCCGCCGCAAAAG AAAAAGGCCGCGCGC AAC GCACGCGGCCTTTTC ATTCATTGGAAGGTC TERM 214 178265 - 178287 + T 100 -16.2 -4.4959 | opp_overlap 178265, overlap 178260 GCCGCAAAAGAAAAA GGCCGCGCGC AAC GCACGCGGCC TTTTCATTCATTGGA TERM 215 178287 - 178265 - T 100 -18.4 -5.45802 | opp_overlap 178265 178260 GCCGCAAAAGAAAAA GGCCGCGCGC AAC GCACGCGGCC TTTTCATTCATTGGA Bphy_0157 179265 - 178306 - | 2-nitropropane dioxygenase NPD TERM 216 178973 - 178956 - G 70 -6.3 -4.25104 | gap 1, opp_overlap 178946 GGCTCGTGATGAAAA TCG-GCAC CTT GTGCTCGA CGCAGACGCGGATAT Bphy_0158 179525 - 180415 + | alpha/beta hydrolase fold protein Bphy_0159 180930 - 180445 - | AsnC family transcriptional regulator TERM 217 180876 - 180900 + g 89 -10 -4.56775 | gap 1, overlap 180873 TGCGATCGGTGTCGT CGAGCG-TCGC GGGC GCGGGCGCTCG TTTTTCGGCACCAGT Bphy_0160 181042 - 181941 + | hypothetical protein TERM 218 182081 - 182106 + T 93 -9.7 -4.86385 | gap 1, overlap 182093 CGTCAATATCATTGT GCCGCTCGAACT GAA AGC-CGAGCGGC TTTCTTTTTGCAGGT TERM 219 182093 - 182110 + T 87 -9.9 -4.60041 | overlap 182081 TGTGCCGCTCGAACT GAAAGCC GAGC GGCTTTC TTTTTGCAGGTCCGT Bphy_0161 183093 - 182173 - | beta-lactamase domain-containing protein Bphy_0162 183545 - 183090 - | dehydratase TERM 220 183264 - 183278 + g 82 -4.2 -5.10029 | CATTGTCAGCGTGTC GCCG CTATGCA CGGC TTTTTTCAACTTGAT Bphy_0163 183790 - 183542 - | hypothetical protein Bphy_0164 184320 - 183787 - | YbaK/prolyl-tRNA synthetase associated region Bphy_0165 185268 - 184342 - | pyruvate carboxyltransferase Bphy_0166 186326 - 185385 - | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding Bphy_0167 186570 - 187172 + | hypothetical protein Bphy_0168 187427 - 187197 - | hypothetical protein TERM 221 187481 - 187492 + H 74 -2.2 -4.89393 | opp_overlap 187475 CGTGTGAAAGCGACG CTTC GCAA GAGG TTTTTCTAACGTTTC Bphy_0169 187790 - 188815 + | sulfate ABC transporter, periplasmic sulfate-binding protein TERM 222 188863 - 188841 - T 100 -17.8 -4.98531 | opp_overlap 188841 GCGCGAAACGAAAAA GCCGCTTCGA CAT TCGAAGCGGC TTTTTCGTTGGAGGT TERM 223 188841 - 188863 + T 100 -17.8 -4.86621 | opp_overlap 188841 GCGCGAAACGAAAAA GCCGCTTCGA CAT TCGAAGCGGC TTTTTCGTTGGAGGT Bphy_0170 190036 - 188981 - | biotin synthase TERM 224 189676 - 189704 + g 71 -4.5 -4.54727 | gap 1, opp_overlap 189693, overlap 189668 TCGGATTGCGCCACG CGGCGCCCATGC AGAAAC GCGTCG-CGCCG TTTTCCTTTGCGACG Bphy_0171 190792 - 190073 - | dethiobiotin synthase Bphy_0172 191973 - 190789 - | 8-amino-7-oxononanoate synthase TERM 225 191757 - 191781 + g 72 -12.7 -3.09516 | opp_overlap 191744 GATGCGAGCCGCCGC TGCCCGCGCCG TAG CGGCGCGCGCC TTCCGTGATGGCCGC Bphy_0173 193319 - 191973 - | adenosylmethionine-8-amino-7-oxononanoate aminotransferase TERM 226 192498 - 192480 - G 71 -7.3 -4.19483 | opp_overlap 192480, overlap 192474 CGACAGACACAGAAA GTCCGGC CATAC GCCGGCC TGTTCGCTCGCGAAG TERM 227 193370 - 193338 - R 70 -12 -2.73875 | gap 1, overlap 193323 193348 TGCTCCGGAACATGA GCCGGGCA-AACGCG CGAG CGCGTCGTGCCGGGC GGGCATGTAAAGGGG TERM 228 193800 - 193786 - R 77 -2.7 -5.14563 | CGTGCGACGAAAAAA CGGCG TAGAT CGACG TATGCCTCGACAGGC TERM 229 193866 - 193830 - R 100 -21.7 -5.00138 | overlap 193833 CAGCGAAAGCAAAAA CAATCGCCCGCTGCGCA GTA TGCGCAACGGGCGATTC AGAGATCAGCGGAGA TERM 230 193863 - 193833 - R 100 -23.4 -4.58698 | overlap 193830 CGAAAGCAAAAACAA TCGCCCGCTGCGCA GTA TGCGCAACGGGCGA TTCAGAGATCAGCGG Bphy_0174 195182 - 193893 - | hypothetical protein TERM 231 194315 - 194346 + g 80 -12.3 -3.78934 | gap 1, opp_overlap 194283 194306 ACCACACGCGCACGC CGTCGCG-ATCGCC GACGA GGCGATGCGCGTCG TTCTTGTACGCGCCG Bphy_0175 196191 - 195745 - | hypothetical protein Bphy_0176 197340 - 196210 - | acyl-CoA dehydrogenase domain-containing protein TERM 232 196433 - 196473 + g 72 -11 -3.49951 | opp_overlap 196416, overlap 196434 TGGCCCGCGTCCTTT AGCGAGGCGGCGTGCCAG ATGAG CTGACGCGCCGCTTCGAG TTGTGTCGCCATGTC TERM 233 196434 - 196472 + g 75 -14.5 -2.69649 | opp_overlap 196416, overlap 196433 GGCCCGCGTCCTTTA GCGAGGCGGCGTGCCAG ATGAG CTGACGCGCCGCTTCGA GTTGTGTCGCCATGT TERM 234 196809 - 196822 + g 81 -5.2 -4.87665 | opp_overlap 196798, overlap 196800 TGAACGCGCTGATGC CGCG TTTGCC CGCG TTTTTGTCGGTGACG TERM 235 197336 - 197358 + g 89 -2.6 -5.40004 | opp_overlap 197338, overlap 197338 TGGTCCTGATCGAGC AACATGCGGG TCT CCTGAATGTC TTTTTTCGTTTGATC Bphy_0177 198054 - 197377 - | short-chain dehydrogenase/reductase SDR Bphy_0178 199293 - 198103 - | acetyl-CoA acetyltransferase TERM 236 198466 - 198484 + g 79 -5.8 -4.71061 | overlap 198468 GCCGACGACACGAGC GAGCGGCG TCA CGCCGAGC TTTTTCGCTGTCGAT Bphy_0179 200062 - 199286 - | carbonate dehydratase TERM 237 200108 - 200118 + r 70 -2.4 -4.72272 | overlap 200105 TGTTGTTCAATTGCG GACG GTG CGCC TTTTTCATGCAGCGC Bphy_0180 201931 - 200123 - | (isocitrate dehydrogenase (NADP(+))) kinase TERM 238 200237 - 200254 + g 71 -4.1 -4.57569 | GGGCAACTCGCCACG CAGAATG TAGT CTTTCTG TTTTTGCCACAGTGC TERM 239 200323 - 200304 - G 78 -7.8 -4.37886 | overlap 200306 TGATGCTTGAGAAAA GATTCGCG CACG CGCGGATC GCCGAGCAGGAAGGT TERM 240 200397 - 200359 - G 71 -4.5 -4.56775 | opp_overlap 200359 ACGTCTCCGGAAAAA TGTCGTGCGGGCC GACCGAATACCAA GGCTCGCCCGACA TCTCGTCTTCCTCGT TERM 241 201763 - 201776 + g 71 -8.1 -4.08216 | CATACGACGTGATGC GCTCG CGCG CGAGC TTTTGCAGGCCGTGC TERM 242 202000 - 202022 + r 78 -9.8 -4.07568 | overlap 202001 TGTATCGCCCGGGTG AGCTTGCGAG ACG CTCGCGAGCC TTTTGGGCGCGGCGC TERM 243 202001 - 202021 + r 79 -13.3 -3.04398 | overlap 202000 GTATCGCCCGGGTGA GCTTGCGAG ACG CTCGCGAGC CTTTTGGGCGCGGCG Bphy_0181 202589 - 202155 - | MerR family transcriptional regulator Bphy_0182 202753 - 203823 + | beta-lactamase domain-containing protein TERM 244 203899 - 203870 - T 81 -12.1 -3.78329 | gap 1, opp_overlap 203872, overlap 203872 GCGCACCAACGCAAA CAGCCCGG-CCGCA TCA CGCGGGCCGGGCTT TTTTGATGCGTCGAA TERM 245 203897 - 203872 - T 87 -14.7 -3.47526 | gap 1, opp_overlap 203872, overlap 203870 GCACCAACGCAAACA GCCCGG-CCGCA TCA CGCGGGCCGGGC TTTTTTGATGCGTCG TERM 246 203872 - 203897 + T 100 -14 -5.1675 | gap 1, opp_overlap 203872 203870 GCACCAACGCAAACA GCCCGG-CCGC ATCAC GCGGGCCGGGC TTTTTTGATGCGTCG Bphy_0183 205525 - 203927 - | extracellular solute-binding protein Bphy_0184 206551 - 205739 - | periplasmic binding protein TERM 247 205949 - 205912 - G 75 -3.3 -4.77165 | gap 1, overlap 205913 CGCTCGACAACAAAA TGCGCTCCACGC-GAGTG AGC CACTCGGCGTCGAGATCG AACGAAGGATAGCGC TERM 248 205997 - 205961 - G 75 -14.4 -2.97166 | overlap 205956 ATCGAACGAAGGATA GCGCGACGCGCCCG TCTCGCCCC CGGGCACGTCGGGC AGCGTGTGCCAGTTG Bphy_0185 207325 - 206555 - | short-chain dehydrogenase/reductase SDR Bphy_0186 207982 - 207344 - | DSBA oxidoreductase Bphy_0187 208933 - 208136 - | sporulation domain-containing protein TERM 249 208996 - 208959 - R 82 -6.3 -4.86385 | gap 1, opp_overlap 208969, overlap 208960 208961 ACCTGCAAAAAGAAA TCTGGAATGACCGTCGAT TAT AGCGACGGTCATT-CGGC TCGCGTCCCGAATAC Bphy_0188 210818 - 209034 - | arginyl-tRNA synthetase TERM 250 209103 - 209132 + g 78 -14.3 -3.21099 | CTGACGCGTTGCCGC GAGCAGCGCGATG CGCG CATTGCGCTGCGC TTCGTCGTCGACCAG TERM 251 209892 - 209912 + g 71 -12.5 -3.23395 | GTCGCCGTCGTCGGT GGTGCGCAG CCA CAGCGCACC TTCCTGCTCGTAGGT Bphy_0189 211190 - 211516 + | hypothetical protein TERM 252 211515 - 211567 + T 83 -15 -2.79098 | gap 1, opp_overlap 211531, overlap 211531 TCGTCTGGGGTATCT GACGCGCAA-ACAAAAAGCCCGTCG TGAC CGACGGGCTTTTTTCATTGCGTGGC TGCTTACTGGCTCGC TERM 253 211550 - 211531 - T 100 -15 -5.27938 | opp_overlap 211515 211531 ACGCGCAAACAAAAA GCCCGTCG TGAC CGACGGGC TTTTTTCATTGCGTG TERM 254 211531 - 211550 + T 100 -15 -5.28481 | opp_overlap 211531, overlap 211515 ACGCGCAAACAAAAA GCCCGTCG TGAC CGACGGGC TTTTTTCATTGCGTG Bphy_0190 214676 - 211959 - | methionine synthase Bphy_0191 215808 - 214738 - | homocysteine S-methyltransferase TERM 255 215826 - 215840 + r 100 -12.8 -5.00884 | TCTGATCGGGCTCGT GCCGGC ATG GCCGGC TTTTTTCAGGAAACT TERM 256 216084 - 216060 - R 100 -14.9 -5.1417 | GGATAAAACGAAAAA CCCCGCCTGGC AAT GCCGGACGGGG TCGATGGGGAACGTG Bphy_0192 216381 - 216124 - | hypothetical protein Bphy_0193 217287 - 216499 - | alpha/beta hydrolase fold protein Bphy_0194 218733 - 217504 - | hypothetical protein TERM 257 218031 - 218043 + g 79 -6.2 -4.60487 | overlap 218028 TGGTGATGTCTTCGC CGCG ACGGC CGCG TTTTTCGACGTACTG TERM 258 218485 - 218513 + g 86 -15.2 -3.53811 | overlap 218486 GGCGGGCGACGCTTT GGCGGGCGGCGG CGAAC CCGCCGCCTGCG TTTCGACGCGCTCAG TERM 259 218486 - 218512 + g 87 -18.7 -2.72144 | overlap 218485 GCGGGCGACGCTTTG GCGGGCGGCGG CGAAC CCGCCGCCTGC GTTTCGACGCGCTCA Bphy_0195 219749 - 218859 - | IclR family transcriptional regulator TERM 260 220447 - 220470 + G 74 -5.3 -4.56597 | gap 1 CGCAATCTGATTCCC GCCGAA-CTC GCGAA GGGCTTCGGC TTTTTCCAGAGCAAG Bphy_0196 219910 - 220902 + | fumarylacetoacetate (FAA) hydrolase TERM 261 221491 - 221472 - g 71 -10.6 -3.66178 | TTGCCGAAGGTGAAA CGCCCGCG ATCT CGCTGGCG TCGTCGGCGAAGATC TERM 262 221993 - 222013 + G 72 -11.1 -3.54424 | opp_overlap 222006, overlap 221981 GCTTCGAAGCGTCTG GCGCTCGAT TAC ATCGCGCGC TTTGAGAAGCTGCGC TERM 263 222135 - 222113 - g 75 -12.6 -3.53811 | opp_overlap 222113 222122, overlap 222114 CCCATTGCTCTGAAA GCGGCCGCGC CCG GCACGGCCGA GTTTCGCCGCGCGCT TERM 264 222134 - 222114 - g 78 -16.1 -2.72144 | opp_overlap 222113 222122, overlap 222113 CCATTGCTCTGAAAG CGGCCGCGC CCG GCACGGCCG AGTTTCGCCGCGCGC Bphy_0197 221102 - 222295 + | extracellular ligand-binding receptor Bphy_0198 222377 - 223237 + | enoyl-CoA hydratase/isomerase Bphy_0199 223414 - 224157 + | hypothetical protein TERM 265 224218 - 224177 - f 100 -15.7 -4.16016 | gap 1 GTAGCCGCGAACAAA CGG-GCGGGCGCAACGGCCG CCG CGCCCGACGCGCCGGCACCG CGCTTCGCACCTCCG Bphy_0200 224717 - 225589 + | hypothetical protein TERM 266 225675 - 225636 - f 75 -8.5 -4.03234 | gap 1, opp_overlap 225636 225639 225641, overlap 225638 225641 TGCGCCGCACAGAAA CACGACGGCCCGGCTGGT GACAA ACC-GCCGGGCCGTTCTT CTTTTGTCACCGTAC TERM 267 225636 - 225676 + F 77 -8.3 -4.38712 | opp_overlap 225636 225638 225641, overlap 225639 225641 TGCGCCGCACAGAAA CACG-ACGGCCCGGCTGGT GACAA ACC-GCCGGGCCGTTCTTC TTTTGTCACCGTACC TERM 268 225673 - 225638 - f 74 -11.1 -3.61232 | gap 1, opp_overlap 225636 225639 225641, overlap 225636 225641 CGCCGCACAGAAACA CGACGGCCCGGCTGGT GACAA ACC-GCCGGGCCGTTC TTCTTTTGTCACCGT TERM 269 225639 - 225673 + F 100 -14.4 -4.31397 | opp_overlap 225638 225636 225641, overlap 225636 225641 GCCGCACAGAAACAC G-ACGGCCCGGCTGGT GACAA ACC-GCCGGGCCGTTC TTCTTTTGTCACCGT TERM 270 225670 - 225641 - f 88 -17.2 -2.92495 | gap 1, opp_overlap 225639 225636 225641, overlap 225638 225636 CGCACAGAAACACGA CGGCCCGGCTGGT GACAA ACC-GCCGGGCCG TTCTTCTTTTGTCAC TERM 271 225641 - 225670 + F 100 -17.2 -4.26938 | gap 1, opp_overlap 225641 225638 225636, overlap 225639 225636 CGCACAGAAACACGA CGGCCCGGCTGGT GACAA ACC-GCCGGGCCG TTCTTCTTTTGTCAC Bphy_0201 225714 - 226196 + | rfaE bifunctional protein TERM 272 226197 - 226233 + T 70 -12.1 -2.74501 | opp_overlap 226179 226203, overlap 226198 CGCGCTCAAGGCTGA ACGCAACGACGCGAGCC TGC GGCCCGCGTCGTCGAGC GTTTGCGGCGTTACT TERM 273 226227 - 226203 - T 100 -19.3 -3.18199 | opp_overlap 226197 226198 CAAGGCTGAACGCAA CGACGCGAGCC TGC GGCCCGCGTCG TCGAGCGTTTGCGGC Bphy_0202 226483 - 226244 - | hypothetical protein Bphy_0203 227392 - 226523 - | Baf family transcriptional activator Bphy_0204 228348 - 227389 - | biotin--acetyl-CoA-carboxylase ligase Bphy_0205 228496 - 229635 + | hypothetical protein TERM 274 230005 - 229987 - g 83 -14.6 -3.21276 | overlap 229985 CGGTCTTCGACAACA TCGCGCAG CCG CTGCGCGA GCTCGGCAAGGTGCC Bphy_0206 229632 - 230522 + | ABC transporter related TERM 275 231558 - 231535 - g 81 -13.2 -3.65529 | overlap 231542 231544 AGACGTTCAGCGAAA CACCGAACAG CGTG CTGTTCGGCG CGCCGCACGCGGCAC Bphy_0207 230664 - 231626 + | hypothetical protein Bphy_0208 231645 - 232271 + | hypothetical protein TERM 276 233008 - 233065 + G 80 -16.2 -2.83012 | gap 2, overlap 233027 233048 TTGCCGCGCTCAACC TGC-TG-GCGGCGGGCGCGCTCGCGTCG CTGC CGATGCGCGAGCGCGCGCCGCGCGTGCG TCTGCTGATCGCGTT Bphy_0209 232302 - 233462 + | VanZ family protein Bphy_0210 233608 - 233931 + | putative ferredoxin TERM 277 234049 - 234008 - g 83 -14.9 -3.1855 | opp_overlap 234036 GTGGGCAAGATCGAA GTCGCCGTCGACGCGCCCG ACGC CAGCCGCGACGGCGGCGCC GCACCGCGCGGCATC TERM 278 234290 - 234303 + G 76 -2.3 -4.8622 | overlap 234287 CAGGCCGATCTGCCG CTCGT GCTC GCGGG TTTTTCGTTCGGCAC Bphy_0211 233954 - 234598 + | hypothetical protein TERM 279 234677 - 234659 - f 83 -5.2 -5.00616 | overlap 234660 TCGTGTTGCAAAAAA CCCGCG AAAAACG CGCGGA AACTCAATGACGTAG TERM 280 234896 - 234868 - f 90 -12.4 -4.21908 | gap 1 GACGAGCAGTCAAAA CGACGCCGCATCG CATG CG-TGCGGCGGCG CCTGCCAGTCGGGCA Bphy_0212 234977 - 236206 + | Serine-type D-Ala-D-Ala carboxypeptidase Bphy_0213 236305 - 236574 + | hypothetical protein TERM 281 236631 - 236658 + T 76 -7 -4.46212 | gap 1, overlap 236634 236635 CCGCCTGCGTCGCCG GAAGCTGGACGTG CAA CGCGTCCAG-TCC TTTTGTCCTGGCCGC Bphy_0214 237612 - 236608 - | LysR family transcriptional regulator TERM 282 236635 - 236655 + g 74 -13.3 -3.20028 | overlap 236634 236631 CTGCGTCGCCGGAAG CTGGACGTG CAA CGCGTCCAG TCCTTTTGTCCTGGC Bphy_0215 237711 - 238037 + | hypothetical protein TERM 283 238071 - 238125 + F 88 -14.2 -3.57144 | overlap 238063 238072 TTATTGCTCTCGCGA TCGGCGAGGTGCGCGGGATTTCGGTA AAC TGCCGCAATCATGTGTGCCACGCCGG TTTCACCATCCCCCG TERM 284 238072 - 238124 + F 83 -15.5 -2.74144 | overlap 238063 238071 TATTGCTCTCGCGAT CGGCGAGGTGCGCGGGATTTCGGTA AAC TGCCGCAATCATGTGTGCCACGCCG GTTTCACCATCCCCC Bphy_0216 238110 - 238877 + | lipoate-protein ligase B Bphy_0217 238891 - 239895 + | lipoic acid synthetase TERM 285 239945 - 239930 - f 89 -6 -5.06414 | opp_overlap 239930 CCGCTTGAAGAAAAA GCTCGC GAAA GCGGGC TTTTTTGTTTTCTGA TERM 286 239930 - 239945 + F 100 -8.2 -5.86976 | opp_overlap 239930 CCGCTTGAAGAAAAA GCTCGC GAAA GCGGGC TTTTTTGTTTTCTGA TERM 287 240845 - 240829 - g 71 -7.9 -4.07885 | overlap 240831 CACGCTCGCGCAAAA CACGGCG GCG CGCCGTC TCGCGCTCGGCAGCC TERM 288 240843 - 240831 - g 71 -10.5 -3.63744 | overlap 240829 CGCTCGCGCAAAACA CGGCG GCG CGCCG TCTCGCGCTCGGCAG Bphy_0218 240128 - 241816 + | sodium-dependent inorganic phosphate (Pi) transporter Bphy_0219 242597 - 241824 - | DeoR family transcriptional regulator Bphy_0220 243038 - 243802 + | glycerophosphodiester phosphodiesterase TERM 289 243824 - 243811 - f 76 -4.5 -4.8622 | overlap 243813 GGCCTGAACGAAAAA CGTGC CCGC ACACG CAGACAAAGAAAGAC Bphy_0221 243893 - 244990 + | extracellular solute-binding protein TERM 290 245221 - 245233 + G 86 -6.9 -4.93696 | CATCTGGACGTGGAT CGGCG TGA TGCCG TTTTTCCTCTTTGCG Bphy_0222 245099 - 246043 + | binding-protein-dependent transport systems inner membrane component Bphy_0223 246040 - 246831 + | binding-protein-dependent transport systems inner membrane component Bphy_0224 246852 - 247931 + | spermidine/putrescine ABC transporter ATPase subunit TERM 291 247996 - 247952 - f 75 -10.8 -3.67775 | opp_overlap 247952 247956 247971, overlap 247965 247995 AGCCTTATGCAACAA GGCGTTCGGAAATCCGGA CGTCTGGAT TCCGGATTTCCGGAAACC CGGAAGTCCGCGTCC TERM 292 248109 - 248090 - f 76 -4.8 -4.85782 | overlap 248092 CCTTGCAAAAAGAAA GCGCGGCC GCAA GGCCGATC AACTACAAAGCAAGC TERM 293 248951 - 248923 - g 74 -14.5 -2.53715 | overlap 248922 GGCATCATCACGAAG CTCGCGCCGATCG GTG CGTTCGGCGCGAT GGCGTTCACCATCGG Bphy_0225 248341 - 249621 + | sodium:dicarboxylate symporter TERM 294 249662 - 249630 - g 83 -14.7 -3.21912 | overlap 249631 249648 GGTCTAAGCGATGAA GGCGGCGGCGCGGCA ACA TGGCGCGTCGCCGCA CGCTACGCAAGCAAC TERM 295 249661 - 249631 - g 86 -18.2 -2.52933 | overlap 249630 249648 GTCTAAGCGATGAAG GCGGCGGCGCGGCA ACA TGGCGCGTCGCCGC ACGCTACGCAAGCAA TERM 296 250337 - 250372 + G 81 -3.3 -5.00895 | gap 1, overlap 250338 250341 AGGGCGCCGATGCGT CCGAGCCGATGATCGT GACCG ACGATCAT-GGCGTGA TTTTTCTCTCCTCGG TERM 297 251441 - 251473 + G 77 -5.4 -4.60255 | overlap 251471 CCGTGAGCGACAACG GTCCCGGCATTCCC GACGA GGTATTGCCGCGGC TTTTTGAGCCCTTCT Bphy_0226 249625 - 251676 + | integral membrane sensor signal transduction histidine kinase TERM 298 252042 - 252023 - g 76 -9.2 -4.1899 | TGACTTCATCGAAAA GCCGTTCG CTTC CGAGCGGC TGATCGAAACCGTGC TERM 299 252666 - 252686 + G 71 -10.4 -3.64283 | overlap 252670 CCGCCGCTGTCCGAG CGGCGCGA GGACA TCGTGCCG TTGTTCGAGCATTTC Bphy_0227 251706 - 253064 + | two component, sigma54 specific, Fis family transcriptional regulator Bphy_0228 253673 - 253149 - | redoxin domain-containing protein TERM 300 254155 - 254192 + G 80 -11.9 -3.74693 | gap 1, opp_overlap 254163, overlap 254156 254159 GGCACGGTGATGCTG CCAAGCGACGACCCGCAG ATG CAGCGGGTCG-CGCTCGA TTTCCTGCGCTCGGG TERM 301 254156 - 254191 + G 80 -15.4 -2.84602 | gap 1, opp_overlap 254163, overlap 254155 254159 GCACGGTGATGCTGC CAAGCGACGACCCGCAG ATG CAGCGGGTCG-CGCTCG ATTTCCTGCGCTCGG TERM 302 254159 - 254188 + G 78 -15.7 -2.67981 | gap 1, opp_overlap 254163, overlap 254156 254155 CGGTGATGCTGCCAA GCGACGACCCGCAG ATG CAGCGGGTCG-CGC TCGATTTCCTGCGCT TERM 303 254185 - 254163 - g 73 -14.8 -2.52676 | opp_overlap 254159 254156 254155 GATGCTGCCAAGCGA CGACCCGCAG ATG CAGCGGGTCG CGCTCGATTTCCTGC Bphy_0229 253846 - 254454 + | hypothetical protein TERM 304 254549 - 254573 + T 90 -11.5 -4.26202 | CACGGAACTTTTTTT GTTACCCACAG GAT CTGTGGATAAC TTTGTTAGTAACTCT TERM 305 254743 - 254767 + T 70 -2.1 -4.85599 | opp_overlap 254749, overlap 254746 254748 254749 GCTGCCCGAAAATGT GCATAAGTCAA GTC TTGACATGTTC TTTTTGTCGAATGCG Bphy_0230 256241 - 254787 - | Mg chelatase, subunit ChlI TERM 306 255437 - 255399 - G 71 -8.1 -4.1673 | gap 1, overlap 255419 255420 CAATTCGTCAAGAAA CAGCACGCCGAGAT-GCG AAAG CGTGATCTCGCCGGGCTG GGGCGGATTGCGTCC TERM 307 257528 - 257517 - g 70 -5.8 -4.27297 | GGAACAATAAAAATA CCGT TATG ACGG AGCCATTTACAAATC TERM 308 257777 - 257765 - g 81 -9.1 -4.28791 | AACCTAGAATATAAA CGTCG CCT CGACG CGACCATAAAGTTTG Bphy_0231 256256 - 258205 + | hypothetical protein TERM 309 258250 - 258217 - g 71 -4.5 -4.48072 | gap 1, opp_overlap 258218, overlap 258218 ATAGCCAGCATAAAA TTAGTCGATCCGAGCG GTT CGCGCCG-TCGACTAT TAATATGCTTCTAAC Bphy_0232 258183 - 260423 + | hypothetical protein Bphy_0233 260413 - 261009 + | hypothetical protein Bphy_0234 261016 - 262260 + | hypothetical protein Bphy_0235 263497 - 262310 - | hypothetical protein TERM 310 265881 - 265894 + G 93 -5.2 -5.44119 | opp_overlap 265881 TGCCGTGAATGAAAC GGGC GAGATG GCCC TTTTTTTCGCGTCGC Bphy_0236 263893 - 266946 + | hypothetical protein TERM 311 267433 - 267452 + G 81 -12.2 -3.84873 | overlap 267447 AGCGTATCGCGGAGG TTGCCGGA GACT TCCGGCAA TTGTTGCTGTTGTCT TERM 312 268215 - 268193 - g 70 -7.7 -4.06502 | gap 1, opp_overlap 268193 268192 268188 CACGGTCAAACGAAA CCGCGAT-GC TGCC GCTACCGCGG ACATCGTGGATCTGT Bphy_0237 266943 - 269915 + | SNF2-related protein Bphy_0238 270908 - 269916 - | hypothetical protein Bphy_0239 272640 - 270901 - | NERD domain-containing protein TERM 313 272105 - 272130 + g 82 -6.8 -4.68593 | CGCTCAAGCTTGCCA GCCTTCCCTG GAAATG CGGTGAAGGC TTTTTCGATCATCCG Bphy_0240 278936 - 272643 - | helicase superfamily protein TERM 314 272881 - 272901 + g 71 -3.9 -4.57837 | overlap 272883 272899 GACTCTTCCACACGC GTGAACATG TGC CATGTCCCC TTTTTAAAAGGGTAT TERM 315 275600 - 275585 - G 80 -4.6 -4.77036 | overlap 275564 TTCGAGTACGAAAAA CCGTGT CTTT ACGCGG ATCGAGTAGCGCGGT TERM 316 277698 - 277722 + g 83 -2 -5.14563 | gap 1, opp_overlap 277694 277693, overlap 277693 277692 AAGAGGCAAATCGCC GGAC-CCCGAC GGAC GTCGGGCGAAC TTTTTTCCTCGAAGA TERM 317 279203 - 279190 - R 74 -8.1 -4.13304 | overlap 279192 AAATCATTTCCAAAA GAGCG CGGA CGCTC GCCGTCTAGATGCCG Bphy_0241 279430 - 279209 - | phage transcriptional regulator, AlpA Bphy_0242 279867 - 280988 + | integrase family protein Bphy_0243 281394 - 281735 + | hypothetical protein TERM 318 281907 - 281878 - f 85 -9.4 -4.43844 | opp_overlap 281884, overlap 281884 TGACGAGTCAGAAAA CAAAAACCGGCC TAAGTG AGCCGGTTTTTA ACGAGAATTGGTGGA TERM 319 281901 - 281884 - f 95 -6.2 -5.54907 | opp_overlap 281884, overlap 281878 GTCAGAAAACAAAAA CCGGCC TAAGTG AGCCGG TTTTTAACGAGAATT TERM 320 281884 - 281901 + F 75 -5.5 -4.57341 | opp_overlap 281884 281878 GTCAGAAAACAAAAA CCGGC CTAAGTGA GCCGG TTTTTAACGAGAATT TERM 321 282303 - 282277 - f 81 -8.8 -4.29738 | opp_overlap 282277, overlap 282279 CTAGACGCAGTAAAA TACATCAACTTG ATG CAAGTGGATGCA TTCGCTCATGACTCG TERM 322 282301 - 282279 - f 72 -9.2 -3.74902 | opp_overlap 282277, overlap 282277 AGACGCAGTAAAATA CATCAACTTG ATG CAAGTGGATG CATTCGCTCATGACT TERM 323 282549 - 282507 - f 70 -2.6 -4.77157 | gap 1, opp_overlap 282515 282538, overlap 282509 282511 282512 CTAACCGAGCAAAAA GATAGGAATGCGCGCGGCG ATATTA CGCGGCTCGCATTC-TGGC GAATTATCAACATAC TERM 324 282545 - 282512 - f 70 -12.4 -2.74018 | opp_overlap 282515 282538, overlap 282511 282509 282507 CGAGCAAAAAGATAG GAATGCGCGCGGCG ATATTA CGCGGCTCGCATTC TGGCGAATTATCAAC TERM 325 282666 - 282684 + G 81 -3 -5.0133 | GTTGATCCGCAACTC GTTGACGG TGA CTGGCGAC TTTTTTGCCCGGATA TERM 326 282940 - 282926 - g 93 -3.5 -5.31275 | CTCCAGGACAAAAAA TCCCG CAGAT CGGAA AGCTGTCATTCGTCA TERM 327 283391 - 283404 + G 78 -4.5 -4.84527 | TCACAGCCTGGGTTG GACTC TAGA GGGTC TTTTTGCTCTCTGCG TERM 328 285670 - 285658 - g 75 -4.1 -4.6821 | overlap 285659 AACGTGAACAGAAAA CCATG GCG CATGA GTTTGCAGCACTGAA TERM 329 286182 - 286171 - g 87 -5.8 -5.03715 | AGTACGCGGAAAAAA GCAC GGAT GTGC GAACCATCGAAATCG Bphy_0244 282639 - 286271 + | hypothetical protein Bphy_0245 286279 - 287766 + | hypothetical protein TERM 330 292209 - 292173 - g 72 -3.6 -4.68593 | gap 1 TTGACGAGGCAAAAA TCCTGAGCACCGGTGGT GGTG ACC-CGGATGCACCGGA TCGCATCCTGAATCT Bphy_0246 287759 - 292492 + | hypothetical protein Bphy_0247 293647 - 292826 - | hypothetical protein Bphy_0248 294657 - 294196 - | hypothetical protein TERM 331 294768 - 294756 - H 82 -6.3 -4.80882 | ACTGTAGAGGAAAAA TGCAT GGG ATGCA AGTAGCCATGGAGTG Bphy_0249 294863 - 295270 + | XRE family transcriptional regulator TERM 332 295332 - 295321 - f 83 -4.4 -5.08824 | TTCCCACCCAAAAAA CTGT TCGA ACAG AAGGAAAGAGTCGAA TERM 333 295750 - 295762 + G 80 -4.7 -4.80178 | CTGGAAAAAAAGCGT GGGCG ACT CGACC TTTTCTTGATTGATC TERM 334 295829 - 295813 - g 78 -4.3 -4.84146 | ACGATAGAAAATAAA GCGGGAG CTT CTCTCAC TGAGGCACAGTTAAG TERM 335 296703 - 296719 + G 79 -4.4 -4.8622 | ATCTCAACTCAATTC TGCTAG ACGGG CTGGCA TTTTTAATTGAACAG Bphy_0250 295405 - 296730 + | hypothetical protein Bphy_0251 297155 - 297871 + | hypothetical protein Bphy_0252 298133 - 297861 - | XRE family transcriptional regulator Bphy_0253 298229 - 298702 + | hypothetical protein TERM 336 298791 - 298763 - T 85 -16.8 -2.59431 | overlap 298759 298780 CGTGTGCACAACTGA GCTGTCCACACC ACAAG GGCGTGGACAGC CGCCTTCGGCGGTTC Bphy_0254 299122 - 298886 - | Mg chelatase, subunit D/I family protein Bphy_0255 299477 - 299223 - | hypothetical protein TERM 337 299725 - 299693 - H 84 -6.9 -4.77567 | overlap 299695 ATGCGGACAAGAAAA CGCGCCAAGCCTTGT GCC ACAAGCGTCGGCGAG AGTTTGCCATCAAAT Bphy_0256 299890 - 300228 + | nitrogen regulatory protein P-II Bphy_0257 300255 - 301760 + | ammonium transporter TERM 338 301813 - 301831 + F 100 -13.1 -5.14563 | AGCGCAGCGACTTTG GCCCGCC TTCAC GGCGGGC TTTTTTCATGCCGCG Bphy_0258 302014 - 303303 + | glutamate--cysteine ligase TERM 339 303403 - 303442 + F 72 -9.3 -3.70902 | gap 3 GACAAGAACTTCGGC GGCAG-CACG-CGCGGGCGG ATG CC-CCTGCGACGCGTCTGCC TTTCGCTATAACGAA Bphy_0259 303493 - 304449 + | glutathione synthetase Bphy_0260 304730 - 305227 + | PTS system fructose subfamily IIA component Bphy_0261 305289 - 305558 + | phosphotransferase system, phosphocarrier protein HPr TERM 340 305588 - 305617 + F 100 -15.8 -4.07568 | opp_overlap 305593, overlap 305593 CATTCGTTTTGACTG GAAGACGCCGCG CGATGT CGCGGCGTTTTC TTTTGGCCGGCCGCA TERM 341 305593 - 305612 + F 100 -12.1 -5.07652 | opp_overlap 305593, overlap 305588 GTTTTGACTGGAAGA CGCCGCG CGATGT CGCGGCG TTTTCTTTTGGCCGG TERM 342 305612 - 305593 - f 73 -12.1 -3.05844 | opp_overlap 305588 305593 GTTTTGACTGGAAGA CGCCGCG CGATGT CGCGGCG TTTTCTTTTGGCCGG TERM 343 306561 - 306533 - g 72 -6.7 -4.2349 | gap 1, opp_overlap 306552, overlap 306534 CCGGCAGAGCGAAAA GGCGCTGGAAGC GCGCAA GCTGC-AGCGCC TGAAGTTCTCGCCGA TERM 344 306653 - 306689 + G 72 -6.5 -4.23674 | gap 1, overlap 306641 GCAGGCCGCGCTCGA CGCGG-GCGCGACAGG GATCGG CCTGTTCCGCACCGAG TTTCTGTTCATGAAC Bphy_0262 305778 - 307520 + | phosphoenolpyruvate-protein phosphotransferase Bphy_0263 308326 - 307568 - | UBA/THIF-type NAD/FAD binding protein TERM 345 308409 - 308455 + r 79 -13.6 -3.05715 | opp_overlap 308411 TAATCGCGCGAGGGA AAGTGTCTTCGCGGCGCGCGGT GGC GCAATGCGCCGCGAAGACACGG TTACGTCAGAAGCTT TERM 346 308453 - 308411 - R 100 -19.9 -3.64822 | opp_overlap 308409 ATCGCGCGAGGGAAA GTGTCTTCGCGGCGCGCGG TGGCG CAATGCGCCGCGAAGACAC GGTTACGTCAGAAGC Bphy_0264 310061 - 308469 - | carboxyl-terminal protease TERM 347 309751 - 309775 + g 72 -13.5 -3.13639 | overlap 309750 309755 TGCGAGATTTCGATG CCGAGGCCCGC GAA GCGGCCCTTGG TCTGTTCCTGCAGTT TERM 348 310029 - 310007 - G 79 -6.8 -4.57569 | opp_overlap 310025 GCAGGGTGGCAAAAA CGCCGGTAGC CAG GCCCGCGGCG ATAAGGCCGATATTT TERM 349 310266 - 310250 - g 79 -5.7 -4.59773 | overlap 310252 CCGCAGCGCCAAAAA GTGCCGC CGC GCAGCGC GTGAAACGCGTGAAA Bphy_0265 310206 - 310499 + | hypothetical protein Bphy_0266 311264 - 310518 - | phosphoglycerate mutase 1 family protein TERM 350 311412 - 311422 + G 77 -5.4 -4.59853 | TTTTTTCCGGCGGAT CTTC CGT GAAG TTTTTCACCGATTAC Bphy_0267 311357 - 311842 + | rhodanese domain-containing protein Bphy_0268 311854 - 312102 + | glutaredoxin 3 TERM 351 312162 - 312116 - f 75 -10.7 -3.6502 | gap 1, overlap 312118 GACGTCGGAGCGAAA CACCGCTTGCGCGCCGCGTCGA TCGG TCGTCGCAGCGCGCG-GCAGCC AATAAGATGAAGGCC TERM 352 312160 - 312118 - f 87 -15.5 -3.40597 | gap 1, overlap 312116 CGTCGGAGCGAAACA CCGCTTGCGCGCCGCGTCGA TCGG TCGTCGCAGCGCGCG-GCAG CCAATAAGATGAAGG Bphy_0269 312296 - 312766 + | protein-export protein SecB TERM 353 312938 - 312919 - g 95 -12.1 -4.27617 | opp_overlap 312919 CACATCGCACGAAAA CGCCCGC TATCTG GCGGGCG TTGCGTTGCCCTCCA TERM 354 312919 - 312938 + G 74 -12.8 -3.18274 | opp_overlap 312919 CACATCGCACGAAAA CGCCCGCT ATCT GGCGGGCG TTGCGTTGCCCTCCA Bphy_0270 312788 - 313786 + | glycerol-3-phosphate dehydrogenase (NAD(P)(+)) TERM 355 314488 - 314443 - g 100 -21.3 -3.29144 | gap 2 GCATGCGCGCTACAA GGCGGAGTTC--GGGCGGCGC GTTCAG GCGCCGCCCTCGAACCCCGCC TGACGCCACGCCTCG Bphy_0271 313940 - 314491 + | appr-1-p processing domain-containing protein Bphy_0272 314934 - 314464 - | RNA methyltransferase Bphy_0273 315758 - 314952 - | putative competence protein F-related protein TERM 356 315135 - 315108 - G 95 -16.4 -3.96148 | gap 1, opp_overlap 315093 315133 TGTCGCCACGACAAA TGCGCGGCCGACA TTT TGTCGGC-GCGCA TCGAGATCGAGCTTC Bphy_0274 315848 - 316807 + | methyltransferase type 11 Bphy_0275 317078 - 317572 + | hypothetical protein TERM 357 318482 - 318470 - g 78 -3.3 -4.9645 | overlap 318471 ACCAGAAGAAGAAAA TGGCC GCC GGTCA GGACGACCCGAACAA Bphy_0276 317629 - 319302 + | cytochrome c oxidase, subunit II Bphy_0277 319348 - 320961 + | cytochrome c oxidase, subunit I Bphy_0278 321059 - 321196 + | hypothetical protein Bphy_0279 321249 - 321860 + | cytochrome c oxidase assembly protein CtaG/Cox11 TERM 358 322033 - 322059 + G 81 -9.3 -4.26076 | overlap 322037 322048 ATCCGCTTCACGTGA TCGCCGCGGCG CTGAT CGGCGCAGCGA TTTTCATCGGCGTGC Bphy_0280 321900 - 322106 + | hypothetical protein Bphy_0281 322264 - 323121 + | cytochrome c oxidase subunit III TERM 359 323210 - 323243 + T 83 -15.3 -2.77899 | gap 1, opp_overlap 323202 323212, overlap 323213 GGAAGAAGTCGTAGA CAGCGCCGCCCTCGAC CCA GTCC-GGGCGGCGTTG TGCTTGATGGGACGG TERM 360 323213 - 323240 + T 83 -13.4 -3.54029 | gap 1, opp_overlap 323202 323212, overlap 323210 AGAAGTCGTAGACAG CGCCGCCCTCGAC CCA GTCC-GGGCGGCG TTGTGCTTGATGGGA Bphy_0282 323564 - 323355 - | hypothetical protein Bphy_0283 323652 - 324419 + | hypothetical protein Bphy_0284 324480 - 325151 + | hypothetical protein Bphy_0285 325203 - 326312 + | cytochrome oxidase assembly Bphy_0286 326318 - 327223 + | protoheme IX farnesyltransferase TERM 361 327245 - 327261 + G 87 -15.1 -3.56972 | opp_overlap 327240, overlap 327246 GCTCACTGAACGGTT CGCGCGC GCG GCGCGCG TTGCTTTCGTCGCGT Bphy_0287 327228 - 327845 + | electron transport protein SCO1/SenC TERM 362 327905 - 327876 - T 76 -13.7 -2.76261 | opp_overlap 327881, overlap 327881 GCCGAACGCTGAAAC GAAAAGGCTGCAC GCGC GTGCAGCCTTTTT CTTTTGGACGCCCCA TERM 363 327881 - 327900 + T 100 -13.6 -5.45802 | opp_overlap 327876 327881 ACGCTGAAACGAAAA GGCTGCAC GCGC GTGCAGCC TTTTTCTTTTGGACG TERM 364 327900 - 327881 - T 100 -13.6 -4.55128 | opp_overlap 327881, overlap 327876 ACGCTGAAACGAAAA GGCTGCAC GCGC GTGCAGCC TTTTTCTTTTGGACG Bphy_0288 328213 - 327923 - | YCII-related Bphy_0289 328433 - 330229 + | methyl-accepting chemotaxis sensory transducer TERM 365 330254 - 330271 + F 100 -9.8 -5.26119 | overlap 330258 CGATCGATCATCCAG GGCCGC CGCTGT GCGGCC TTTTCTTTTTCGGAC TERM 366 330258 - 330270 + F 75 -10.5 -3.74587 | overlap 330254 CGATCATCCAGGGCC GCCGC TGT GCGGC CTTTTCTTTTTCGGA Bphy_0290 330475 - 331287 + | YaeC family lipoprotein TERM 367 331339 - 331318 - T 100 -15.1 -4.17089 | opp_overlap 331318 CGCAAACTCGGAAAA GCGCCACGG GGAA CCGCGGCGC TTTTTTTATGCGCGG TERM 368 331318 - 331339 + T 100 -12.9 -5.60993 | opp_overlap 331318 CGCAAACTCGGAAAA GCGCCACGG GGAA CCGCGGCGC TTTTTTTATGCGCGG Bphy_0291 332301 - 331378 - | MarR family transcriptional regulator Bphy_0292 332679 - 333413 + | GntR family transcriptional regulator Bphy_0293 333493 - 334596 + | N-acetylglucosamine-6-phosphate deacetylase TERM 369 335470 - 335501 + G 82 -7.2 -4.65722 | gap 1, overlap 335470 335472 335473 GCTCGTATCGACGGC GCA-CGCGGCGCTCG ATC CGATTGCCGCGATCC TTTCTTTCTATGTGA Bphy_0294 334589 - 335596 + | glutamine--fructose-6-phosphate transaminase (isomerizing) TERM 370 336896 - 336846 - g 72 -11.7 -3.53012 | opp_overlap 336854, overlap 336847 GGCGTGCTGTCGAAA GTCGATGACGCGCTGCTCGCCGA ACGTG CCGCCGACCTGCGCGACATCGAG AAGCGCGTGTTGCGC TERM 371 336895 - 336847 - g 75 -15.2 -2.71712 | opp_overlap 336854, overlap 336846 GCGTGCTGTCGAAAG TCGATGACGCGCTGCTCGCCGA ACGTG CCGCCGACCTGCGCGACATCGA GAAGCGCGTGTTGCG TERM 372 337288 - 337250 - g 72 -13 -3.17075 | overlap 337269 CGTGCGCGAAGCGAA CCGTCGTACGTCGCAGCA AGC CGCCGCGACCAGCGACGG CCGCGCGATCGAAGT Bphy_0295 335610 - 338195 + | phosphoenolpyruvate-protein phosphotransferase Bphy_0296 338304 - 340070 + | PTS system, N-acetylglucosamine-specific IIBC subunit TERM 373 340129 - 340103 - T 71 -10 -3.53012 | opp_overlap 340106, overlap 340105 340106 GTCTTCGTCGCTAAA GAGCCGGCGCCC TCG AGGCGCCGGTTT CTATTTGCGGCTCAG TERM 374 340127 - 340105 - T 79 -12.6 -3.34398 | opp_overlap 340106, overlap 340103 340106 CTTCGTCGCTAAAGA GCCGGCGCCC TCG AGGCGCCGGT TTCTATTTGCGGCTC TERM 375 340106 - 340126 + T 100 -15.4 -4.33258 | opp_overlap 340105 340103 340106 TTCGTCGCTAAAGAG CCGGCGCC CTCGA GGCGCCGG TTTCTATTTGCGGCT TERM 376 340126 - 340106 - T 84 -16.1 -2.60496 | opp_overlap 340106, overlap 340105 340103 TTCGTCGCTAAAGAG CCGGCGCCC TCG AGGCGCCGG TTTCTATTTGCGGCT Bphy_0297 340260 - 340141 - | cyd operon protein YbgT Bphy_0298 341408 - 340272 - | cytochrome d ubiquinol oxidase, subunit II TERM 377 340872 - 340854 - G 88 -17.4 -3.15544 | TTTCATCTTGACGAA CGCCGCGC CGT GCGCGGCG AGCATCGACACGCTC Bphy_0299 343024 - 341435 - | cytochrome bd ubiquinol oxidase subunit I Bphy_0300 343286 - 343014 - | hypothetical protein TERM 378 343520 - 343546 + r 83 -14.5 -3.05022 | gap 1, opp_overlap 343520 ATCAGAAGATAAAAA GCCCCGC-CTTC TTGC GAAGAGCGGGGC TCTGTCTGTAACGGG TERM 379 343546 - 343520 - R 100 -14.5 -5.16133 | gap 1, opp_overlap 343520 ATCAGAAGATAAAAA GCCCCGC-CTTC TTGC GAAGAGCGGGGC TCTGTCTGTAACGGG TERM 380 343616 - 343628 + r 76 -4.7 -4.78572 | overlap 343617 343624 TACGCGTATTCGGCC AGCGC GGT GCGCA TTTTCTTCATTGCGC Bphy_0301 344535 - 343600 - | RNA polymerase, sigma 32 subunit, RpoH Bphy_0302 344862 - 345461 + | hypothetical protein Bphy_0303 345507 - 345890 + | hypothetical protein TERM 381 345949 - 345974 + T 88 -13.3 -3.69354 | TGAGCGGTCCATGCG CGCCGGCGA CGGGTGAA TCGCCGGCG TTTGCGCTTCTGCGG Bphy_0304 347675 - 346020 - | 2-isopropylmalate synthase TERM 382 347179 - 347232 + g 73 -12.4 -3.30203 | gap 3 GTCCAGTGCGTCTGC GG-GC-GGGCGTCGGCGTGCTCGCGGA TGA TCCGCGTGC-CTTCGACGGCCAGCGCC TTCACTTCTTCCTGC TERM 383 347470 - 347431 - G 84 -13 -3.73072 | gap 1, opp_overlap 347431 347436 AACTTCCGGACGAAA TCGAAGTCGGTTT-GCGAC GCC GACGGGAAACCGACTTCGA TCTCCTTGAAACCAG TERM 384 347824 - 347806 - R 88 -11 -4.20367 | GGCGCGAACAAACAA CGTCATCG GAA CGACGACG AAGGCAACGATCGAT Bphy_0305 349163 - 348195 - | glycosyl transferase family protein Bphy_0306 349409 - 350107 + | fumarylacetoacetate (FAA) hydrolase TERM 385 350740 - 350707 - g 70 -11.7 -3.32844 | opp_overlap 350707 GCCCCTATCCGACAA TCCGGCGCATTTGCG ATTA CGCAAACTCGCTGGA TGCGTTCGCGCGCGC Bphy_0307 350142 - 350786 + | maleylacetoacetate isomerase TERM 386 350838 - 350862 + T 70 -5 -4.49756 | opp_overlap 350838 350840, overlap 350833 GCAAGCAATAAAAAA GGGCGTCA GGCGACCGA TGACGCTC TTTTCGTATTTCGCC TERM 387 350862 - 350838 - T 86 -2.8 -5.5604 | opp_overlap 350838 350833, overlap 350840 GCAAGCAATAAAAAA GGGCGTCA GGCGACCGA TGACGCTC TTTTCGTATTTCGCC Bphy_0308 352078 - 350900 - | signal recognition particle-docking protein FtsY TERM 388 351564 - 351616 + g 81 -12 -3.85817 | gap 1, overlap 351562 351607 AGGTCGACGAGCAGC GTGCGCAGCGCGCTCTTTACCTGCT GCGG ATC-GGTGAGGCGCTCGCTGCGTAC TTTCTCGCGCAGCGT TERM 389 352454 - 352432 - g 77 -12.6 -3.57144 | overlap 352435 TTCTGCACGCGCAAA GAGCGCGCCC TCC GGGCGCGGCC AGGCGCACACAATCC TERM 390 352451 - 352435 - g 74 -15.1 -2.61695 | overlap 352432 TGCACGCGCAAAGAG CGCGCCC TCC GGGCGCG GCCAGGCGCACACAA Bphy_0309 352403 - 353017 + | methyltransferase Bphy_0310 353135 - 353641 + | pantetheine-phosphate adenylyltransferase Bphy_0311 353788 - 354045 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 391 354066 - 354094 + T 100 -17.5 -5.20333 | TAGTCTGGCTGAATG CGGCACCGCGT GTAATCG ACGCGGTGCCG TTTTTGTTATCGCTG Bphy_0312 355206 - 354115 - | histidinol-phosphate aminotransferase Bphy_0313 355848 - 355246 - | aminoacyl-tRNA hydrolase TERM 392 355670 - 355613 - G 71 -7.8 -4.18702 | AGAATCTTGAAGAAA TGCGCGAGCGCGACGACGGAT-TGACCC GAGC GGTTCATATACGTCATCG-GTTCGAGCA GATGCACTTCTTCGC TERM 393 355924 - 355901 - R 100 -15.2 -5.87688 | opp_overlap 355901 ATAAGCGAAAAAAAA CCCGCCGGGG CGAA CCGCGGCGGG TTACGTCGACCGTTC TERM 394 355901 - 355924 + r 85 -15.2 -3.06133 | opp_overlap 355901 ATAAGCGAAAAAAAA CCCGCCGGGG CGAA CCGCGGCGGG TTACGTCGACCGTTC Bphy_0314 356580 - 355969 - | ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 TERM 395 356225 - 356249 + g 75 -10.8 -3.85704 | gap 1, overlap 356228 TGCGAGATGATCGCG CCA-CCCAGCT TGAC AGCTGGGTTGG TTTCCTGATTCATGA TERM 396 356228 - 356245 + g 74 -11.3 -3.59233 | overlap 356225 GAGATGATCGCGCCA CCCAGCT TGAC AGCTGGG TTGGTTTCCTGATTC TERM 397 356723 - 356701 - R 90 -12 -4.2349 | opp_overlap 356692 356690 CGCCGATATGCAAAA GCGCCGCA TTCATCG TGCGGCGC CTTCGCGAATACTTT Bphy_0315 357693 - 356737 - | ribose-phosphate pyrophosphokinase Bphy_0316 358750 - 357869 - | 4-diphosphocytidyl-2C-methyl-D-erythritol kinase Bphy_0317 359409 - 358777 - | outer membrane lipoprotein LolB Bphy_0318 361250 - 359409 - | TPR repeat-containing protein TERM 398 361214 - 361170 - G 80 -14.9 -3.14132 | opp_overlap 361184, overlap 361184 GGCGGCGCCCAGCAA CCGGCGCGCGGAAACGGCGTG CGG CACGCTGTTTGCACGGGCCCG GCGCTTCAGAAACTG Bphy_0319 361338 - 362168 + | formamidopyrimidine-DNA glycosylase TERM 399 362376 - 362393 + G 76 -9.8 -4.13014 | overlap 362367 GGTGATCCCGTACTA CGCGCG TTTTCT CGCGCG TTTTCCGGATGTCGC Bphy_0320 362176 - 363285 + | A/G-specific adenine glycosylase Bphy_0321 363931 - 363296 - | peptidase S16 lon domain-containing protein TERM 400 363515 - 363532 + g 82 -5.5 -4.7173 | GATGCGCTCGAGCAC TTCCGCG CACG CGCCGAA TTTTTCCATCTGCTG Bphy_0322 364884 - 363991 - | hypothetical protein TERM 401 364365 - 364330 - G 77 -13.2 -3.36749 | overlap 364331 CACGTCGAACACGAA GTCGGCGTCGAGCGGG ACCC CCCGCTTGAAGCCGAA CGACTCGAACATCAG TERM 402 364364 - 364331 - G 81 -16.7 -2.61728 | overlap 364330 ACGTCGAACACGAAG TCGGCGTCGAGCGGG ACCC CCCGCTTGAAGCCGA ACGACTCGAACATCA Bphy_0323 365930 - 364962 - | HPr kinase TERM 403 366117 - 366136 + r 81 -12.8 -3.53811 | opp_overlap 366117 GAGCGTCGAATCAAA CGCGGCGC CAAA GCGCCGTG TTTCCGCCGGCTCCC TERM 404 366136 - 366117 - R 77 -10.6 -3.90588 | opp_overlap 366117 GAGCGTCGAATCAAA CGCGGCGC CAAA GCGCCGTG TTTCCGCCGGCTCCC Bphy_0324 366680 - 366165 - | putative PTS IIA-like nitrogen-regulatory protein PtsN TERM 405 366896 - 366879 - R 100 -9.8 -5.63517 | opp_overlap 366879 CTCTCAAACAAAAAA CCGCCC GATGTA GGGCGG TTTCGCGGGGTCAAG Bphy_0325 367289 - 366930 - | sigma 54 modulation protein/ribosomal protein S30EA TERM 406 367115 - 367128 + g 84 -6.7 -4.78933 | overlap 367103 TGCCCTTCAGATGCA GGTTG ATTT CAACC TTTTGTCTCTTTTCC TERM 407 367464 - 367440 - R 78 -9.2 -4.07568 | overlap 367441 GGTGCGGCCGGAAAA TGCCCGCCAC AGGAG GTAGCGGGCT ACAGAGACTTGCGCA TERM 408 367463 - 367441 - R 76 -12.7 -3.04398 | overlap 367440 GTGCGGCCGGAAAAT GCCCGCCAC AGGAG GTAGCGGGC TACAGAGACTTGCGC Bphy_0326 368980 - 367463 - | RNA polymerase, sigma 54 subunit, RpoN Bphy_0327 369990 - 369208 - | ABC transporter related Bphy_0328 370664 - 369987 - | lipopolysaccharide transport periplasmic protein LptA TERM 409 370638 - 370589 - G 72 -7.1 -4.28361 | gap 3 GCAATGCGATCAAAA GTGCCGCCAGCCCGGCGCG-GCTC GCGCG GAGCGCGCGC-GTGCGGCCGG-AC TCAAAACGGGGGAAC Bphy_0329 371290 - 370697 - | hypothetical protein Bphy_0330 371850 - 371287 - | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase Bphy_0331 372890 - 371850 - | KpsF/GutQ family protein Bphy_0332 372982 - 374985 + | sodium/hydrogen exchanger TERM 410 375243 - 375276 + G 72 -10.9 -3.48276 | opp_overlap 375242 375243 TGCAAAAACCGAAAT CGCTGCGCGTGCTGA TCGA TCTGTTCGTGCAGCG TTATATCGACCAGAA Bphy_0333 375110 - 375676 + | adenine phosphoribosyltransferase Bphy_0334 375702 - 376316 + | lysine exporter protein LysE/YggA TERM 411 376658 - 376696 + G 73 -12.3 -3.33922 | overlap 376659 376684 CCGCAATGCGTTCGA TGCGCCGCCGCTCGC GTATATCGA GCGCGCGGCGTCGCG CTTTTTCGGCACGAT TERM 412 376659 - 376695 + G 70 -13.6 -2.60032 | overlap 376658 376684 CGCAATGCGTTCGAT GCGCCGCCGCTCGC GTATATCGA GCGCGCGGCGTCGC GCTTTTTCGGCACGA TERM 413 376684 - 376697 + G 86 -9.5 -4.57073 | overlap 376659 376658 TCGCGTATATCGAGC GCGCG GCGT CGCGC TTTTTCGGCACGATG Bphy_0335 376371 - 377219 + | NUDIX hydrolase Bphy_0336 377293 - 378156 + | formyltetrahydrofolate deformylase TERM 414 378178 - 378206 + T 100 -15.3 -5.05782 | gap 1 TTTATTTCGTCTGAA CCGGCGCGTGCC TTGCTC GGC-CGCGCCGG TTTTTTGGGGTGAAT Bphy_0337 379471 - 378233 - | PepSY-associated TM helix domain-containing protein TERM 415 378892 - 378914 + g 77 -4.6 -4.60924 | overlap 378894 GCGCGTAAGCGCCGC GCCGCACGCG AAA CGCGAACGAC TTTTTCCACGCTTTC TERM 416 379698 - 379679 - R 80 -10.6 -4.0162 | opp_overlap 379679 CCCGGATATGAGAAA GGGCGGCC TCAC GGTCGCCC TTTTTGCTCGACAGG TERM 417 379679 - 379698 + r 100 -12.8 -4.72272 | opp_overlap 379679 CCCGGATATGAGAAA GGGCGGCC TCAC GGTCGCCC TTTTTGCTCGACAGG Bphy_0338 380807 - 379722 - | hypothetical protein Bphy_0339 383928 - 380830 - | excinuclease ABC, A subunit TERM 418 380935 - 380947 + g 77 -4.7 -4.62471 | overlap 380936 CGGTTTCGGTGCATC GGCGG CGA CGGCC TTTTTCGGCCTTACC TERM 419 384657 - 384701 + G 78 -12.7 -3.55604 | overlap 384655 CGATGGTGGGCGGTT CGATCGGCGTGTCGTTTGCCG TGG CGATCGTCGGCGCGCCGATCG TGTTTCATTGGCTCG TERM 420 385306 - 385319 + G 78 -3.1 -4.9138 | gap 1 GCTGCTGAAGGTAGA CGGTCA GAG TG-CCG TTTTCTTTGCGTGCT Bphy_0340 384242 - 385399 + | major facilitator transporter Bphy_0341 385525 - 386043 + | single-strand binding protein TERM 421 386102 - 386124 + T 100 -14.8 -5.40072 | opp_overlap 386102 GAATGCAAGAAAAAA CACCCCGCCC ATC GAGCGGGGTG TTTTTTTAAGGGCAG TERM 422 386124 - 386102 - T 100 -17 -5.5074 | opp_overlap 386102 GAATGCAAGAAAAAA CACCCCGCCC ATC GAGCGGGGTG TTTTTTTAAGGGCAG Bphy_0342 386907 - 386164 - | short-chain dehydrogenase/reductase SDR TERM 423 387354 - 387370 + G 83 -5.7 -4.84761 | opp_overlap 387333, overlap 387355 CACGCCACTTCGTCG TGCCGGC GCT GCCCGCG TTTTTGTCACGCTAT Bphy_0343 387038 - 387943 + | LysR family transcriptional regulator Bphy_0344 388753 - 387950 - | hypothetical protein TERM 424 388883 - 388868 - H 70 -2.4 -4.81551 | overlap 388856 388869 TAGCGAGAGGAAAAA GCCCTC GGCA GCGAGC GATCTATGCGCAAGA TERM 425 388922 - 388904 - H 77 -10.4 -3.92592 | ATGCGCAAGATCAAA TTTGCGAA CAT TTCGCAAA AAGCGCCCGCCTGGC Bphy_0345 389091 - 390734 + | methyl-accepting chemotaxis sensory transducer TERM 426 390830 - 390796 - T 100 -16.5 -3.95852 | gap 1, opp_overlap 390790 390797, overlap 390797 ACGGCACGAAGCAAA CCGGCGGTGC-AGGCA TCGT TGCCTTGCACCGCCGT TCGTATTTGCAGAGC TERM 427 390797 - 390829 + T 100 -20 -3.45571 | gap 1, opp_overlap 390797 390796, overlap 390790 CGGCACGAAGCAAAC CGGCGGTGC-AGGCA TCGT TGCCTTGCACCGCCG TTCGTATTTGCAGAG TERM 428 390829 - 390797 - T 100 -20 -2.97029 | gap 1, opp_overlap 390790 390797, overlap 390796 CGGCACGAAGCAAAC CGGCGGTGC-AGGCA TCGT TGCCTTGCACCGCCG TTCGTATTTGCAGAG Bphy_0346 391660 - 390851 - | putative cytochrome c, class I Bphy_0347 393282 - 391657 - | cytochrome c oxidase subunit I TERM 429 392712 - 392656 - G 70 -11.4 -3.4072 | gap 2, opp_overlap 392655, overlap 392658 CAGCGTCCACGAGAA CAGCACG-CGCGCGAGGCCCG-CGTCGA TCG TCGACTTCAGGCCGAGCGCGACGGGCAG GATTTGCAACAGGAT TERM 430 392710 - 392658 - G 71 -12.6 -3.27475 | gap 2, opp_overlap 392655, overlap 392656 GCGTCCACGAGAACA GCACG-CGCGCGAGGCCCG-CGTCGA TCG TCGACTTCAGGCCGAGCGCGACGGGC AGGATTTGCAACAGG Bphy_0348 393841 - 393269 - | cytochrome c oxidase subunit II TERM 431 393797 - 393770 - G 78 -12.7 -3.48024 | opp_overlap 393769, overlap 393768 CGCGATGACGAAATA CGCCCAGCGCT TTTCCG AGCGCTCGGCG ACGGCATGACCGTTA Bphy_0349 394026 - 393844 - | hypothetical protein Bphy_0350 395453 - 394068 - | gluconate 2-dehydrogenase (acceptor) Bphy_0351 396172 - 395450 - | putative periplasmic cytochrome c protein TERM 432 396037 - 396048 + g 71 -4.4 -4.4767 | CGCCGTGACAGGTGG TGCA CGCA TGCA TTTTCTCGTCCATCG TERM 433 396079 - 396102 + g 72 -8.9 -4.07568 | overlap 396053 CCGATGGCGCGGACG CGTCGTTCG AGGCGG CGAACGATG TTTTCGCCCACACCG Bphy_0352 397461 - 396568 - | LysR family transcriptional regulator TERM 434 397284 - 397323 + g 73 -9.1 -3.86481 | gap 1, opp_overlap 397308, overlap 397299 397303 CAGGCGTCGCGGTGA CGC-CCAGCTTGCCGCGC AGGAA GAGCGGCTGGCCGGCGCG TTCTTCTAGCTTCTT Bphy_0353 397559 - 398812 + | major facilitator transporter TERM 435 398848 - 398871 + F 100 -13.2 -4.62102 | AGCACTCATTTTTGA GGCGTTCGAT AGAT GTCGAACGCC TTTTCCTGTTTTTAT TERM 436 398945 - 398971 + F 83 -8.1 -4.70515 | overlap 398958 398960 ATTTGATGTGTGCTG TCTGATTTCTC TGTCC GGGAAGTCAGA TTTATTTTAAATGTG TERM 437 398958 - 398997 + F 80 -4.4 -4.97405 | gap 1, overlap 398945 398960 TGTCTGATTTCTCTG TC-CGGGAAGTCAGATTTA TTT TAAATGTGACGTCGCGTGA TTTCTTTTTATGAGT Bphy_0354 399472 - 400125 + | two component LuxR family transcriptional regulator Bphy_0355 400234 - 400944 + | two component LuxR family transcriptional regulator Bphy_0356 400999 - 401670 + | two component LuxR family transcriptional regulator TERM 438 401763 - 401783 + F 79 -12.7 -3.28712 | TGTGGCGCCACGTCA TTGATTCGC GAT GCGAATCAA TTGTGACCAGGCGCA TERM 439 402112 - 402151 + G 71 -10.7 -3.64198 | gap 2, overlap 402118 CTCGCACCCTATATC GCCGCGCAAGTGCTCGGCG CCGT CGC-GGGCGCT-GCGCTGC TTGTCTATATCGCCA TERM 440 402435 - 402475 + G 82 -3.9 -5.0133 | gap 1, overlap 402447 402450 402453 CCGCTCGACGGGCCC GGCACTGCTCGTCG-GCG ACTGGG CGCTCGACCAGTTGTGGC TTTTTTGGGCGGCTC Bphy_0357 401854 - 402597 + | major intrinsic protein TERM 441 403395 - 403367 - g 89 -16.7 -3.29144 | CGAGTTGCGCGACAA GCTGGAGCGCGGC CTC GCCGCGCTTCAAC CGGAAGATGAAGCCG TERM 442 404872 - 404851 - g 84 -17.3 -2.78384 | opp_overlap 404839 404838 TGCTGGGCTATGACA GCGCTGCGC TGAT GCGCAGCGC TGCGCTCGACTTCGG TERM 443 405655 - 405667 + G 71 -9.1 -3.72576 | overlap 405633 CGGATGTTCAGGCGC GGCTC TTC GAGCC TTTCGTGCAGGCGGA TERM 444 406800 - 406839 + G 76 -9.2 -4.07568 | gap 1 TTGCTCGATGCGTTC GTGTCGGCAGTGCGCGACG ACC TG-CGTGCATTGCCGCCCC TTTTGAACGAGCCCG Bphy_0358 402606 - 407063 + | PAS/PAC sensor hybrid histidine kinase Bphy_0359 407255 - 407689 + | CHRD domain-containing protein TERM 445 407743 - 407713 - f 100 -23.4 -3.67611 | opp_overlap 407713 GGCAGGGCAACATAA TGGCCGGAACCGCC AAC AGCGGTTCCGGCCA TTTGCGATTCGAACG TERM 446 407713 - 407743 + F 100 -22.7 -3.66178 | opp_overlap 407713 GGCAGGGCAACATAA TGGCCGGAACCGC CAACA GCGGTTCCGGCCA TTTGCGATTCGAACG TERM 447 408154 - 408177 + G 88 -10.9 -4.21275 | overlap 408156 GCGTCGTTCGGCCTT GCCGCGCGC AGTGGG GCGCGCGTC TTTTCGCTCGATTAC TERM 448 408156 - 408175 + G 80 -12.1 -3.70331 | overlap 408154 GTCGTTCGGCCTTGC CGCGCGC AGTGGG GCGCGCG TCTTTTCGCTCGATT Bphy_0360 407857 - 408807 + | alpha/beta hydrolase domain-containing protein Bphy_0361 409619 - 408777 - | hypothetical protein TERM 449 409780 - 409759 - H 78 -2.9 -5.14563 | gap 1, opp_overlap 409775, overlap 409760 TGTTCTATCAAAAAA TGGCCGTGCA TAC CGC-CGCCCA CCATTCGAGTGGGCA TERM 450 410244 - 410257 + G 73 -5.9 -4.3739 | GCCAACGCGGTGGGA CCGTC ACTC GGCGG TTTTCTCACCCAATA Bphy_0362 409827 - 411353 + | EmrB/QacA family drug resistance transporter Bphy_0363 411390 - 411860 + | MarR family transcriptional regulator TERM 451 411902 - 411874 - T 100 -11.7 -6.08342 | opp_overlap 411874 GAAGAAATAAAAAAA GCGGCACTATGCA GTT CACACAGCGCCGC TTGCTCGACGAGGCG Bphy_0364 413207 - 411930 - | putative D-serine deaminase (d-serine dehydratase) protein TERM 452 412536 - 412562 + g 70 -10.9 -3.37344 | overlap 412535 412515 412538 GAGCTTCACGGCACT GCGCAGGAAGT CGCGC ACTTCCTGCTC TTCCTTCAATACACC TERM 453 412538 - 412560 + g 71 -12.1 -3.25652 | overlap 412535 412515 412536 GCTTCACGGCACTGC GCAGGAAGT CGCGC ACTTCCTGC TCTTCCTTCAATACA TERM 454 414115 - 414083 - g 73 -11.9 -3.36327 | overlap 414068 CGACTTCATTTACAA GCCGTCGTCGTCGCG CTA CGCGATGATGATGGC GCTCGACGTGCTGGT Bphy_0365 413349 - 414242 + | RpiR family transcriptional regulator Bphy_0366 414246 - 415733 + | N-acyl-D-amino-acid deacylase Bphy_0367 415792 - 416178 + | endoribonuclease L-PSP TERM 455 416256 - 416243 - T 70 -4.5 -4.52781 | gap 1 GAACCACAAGCAAAA CGC-GG ATG CCAGCG AAAGCGCAGAGCGAT TERM 456 416350 - 416339 - T 71 -7.2 -4.24984 | overlap 416340 AGACAAAATGACAAA CGGC TACT GCCG GGCAGTACGCAAATT Bphy_0368 417166 - 416342 - | 7-cyano-7-deazaguanine reductase Bphy_0369 418065 - 417163 - | 5'-nucleotidase TERM 457 417268 - 417256 - G 87 -5.5 -5.06414 | GTCGTCGAAGAAAAA GTCCG GCT CGAAC TCGCGCAGAAACGCG Bphy_0370 419598 - 418075 - | threonine dehydratase, biosynthetic TERM 458 419246 - 419277 + g 71 -7.3 -4.18197 | gap 2 TGCACGACCTCGACG GTCGGCCCGCCGTGC GCGC GCACGGCGT-CC-AC TTTTACCTGCGGCGT TERM 459 419534 - 419570 + g 75 -4.4 -4.66318 | overlap 419535 419536 GCATATTCGAGTTCG GTCTCA-CGCGCGACGTC GTA GACG-CGGGCGTTGAGGA TTTTCTTCAGATAGT TERM 460 424001 - 423980 - g 86 -6.5 -4.97402 | gap 1, overlap 423983 CAAAATCGAGAAAAA CGAC-CGCTG CTG CGGCGAGTCG GGCACGCTGGCCGTT Bphy_0371 420306 - 424421 + | FAD linked oxidase domain-containing protein Bphy_0372 424454 - 424882 + | histidine triad (HIT) protein TERM 461 424908 - 424936 + G 86 -15.4 -3.17763 | gap 1 GAGTGGATTGACACC CGAC-ACGCCCGT GCCT ACGGGCGTCGTCG TTCATGCCGTATCGC Bphy_0373 424891 - 425304 + | hypothetical protein Bphy_0374 425374 - 426105 + | ubiquinone/menaquinone biosynthesis methyltransferase TERM 462 426757 - 426773 + G 74 -11.5 -3.59979 | overlap 426756 426772 GATATCGCCGCCACG CCGGCCG TTC CGGCTGG TTTCGACTCGGAAGC TERM 463 426967 - 426933 - g 84 -12.8 -3.78934 | opp_overlap 426938, overlap 426934 426936 426952 CGGCGCCGAGAAGAA CCAGACCGACGTCGTG AAA CTCGACGCCGATCTGC TGGGCGTCGAGGATC TERM 464 426966 - 426934 - g 84 -16.3 -2.87146 | opp_overlap 426938, overlap 426933 426936 426952 GGCGCCGAGAAGAAC CAGACCGACGTCGTG AAA CTCGACGCCGATCTG CTGGGCGTCGAGGAT TERM 465 426964 - 426936 - g 71 -13.1 -2.98545 | opp_overlap 426938, overlap 426934 426933 426952 CGCCGAGAAGAACCA GACCGACGTCGTG AAA CTCGACGCCGATC TGCTGGGCGTCGAGG TERM 466 426978 - 426952 - g 75 -12.3 -3.54543 | opp_overlap 426938, overlap 426936 426934 426933 ACCGACGTCGTGAAA CTCGACGCCGA TCTGC TGGGCGTCGAG GATCGCGGCAGCGAA Bphy_0375 426142 - 427137 + | import inner membrane translocase subunit Tim44 TERM 467 427201 - 427226 + F 100 -19.7 -4.79451 | opp_overlap 427201 ACGTTACAATAGGAA CCCGCGTCGGC AGTC GCCGGCGCGGG TTTTCTCTTTCCACT TERM 468 427226 - 427201 - f 93 -17.5 -3.42013 | opp_overlap 427201 ACGTTACAATAGGAA CCCGCGTCGGC AGTC GCCGGCGCGGG TTTTCTCTTTCCACT Bphy_0376 427246 - 427890 + | sterol-binding domain-containing protein TERM 469 428735 - 428745 + G 79 -6.8 -4.56597 | TCTTCACGCAGGTGT TCCG CGA CGGA TTTTTCCACGCGGAC TERM 470 428990 - 428978 - g 74 -10.5 -3.72051 | opp_overlap 428976 TCGAAGAACTCGAAA GCGCG ATC CGCGC GGTGTGTGAGCCGTA Bphy_0377 427906 - 429489 + | 2-polyprenylphenol 6-hydroxylase TERM 471 429810 - 429831 + G 70 -5.7 -4.27467 | overlap 429811 AACTCGGCTCGCATG CCAGCCTCG TGCA CGAGGCGGA TTTCTTCACTTATCG TERM 472 429951 - 429969 + G 100 -9.5 -5.13354 | CGCAACTCCTGTCGC CCGGCGG ACTGC TCGCCGG TTTCTTTTTTATCGG Bphy_0378 429512 - 430153 + | thiopurine S-methyltransferase TERM 473 430185 - 430202 + F 95 -14.1 -3.66874 | overlap 430197 CCCCATCTGCTAGCG CGGCCGG GATG CCGGCCG TTTCCCTCGAATTCG Bphy_0379 430292 - 430636 + | FmdB family regulatory protein TERM 474 430669 - 430691 + F 72 -9 -3.87815 | overlap 430670 CGAGGTGACGTAGAC GCCGCGCAAC GCA GTCGCGCGGA TTTCTGGCGGTACAC TERM 475 430670 - 430690 + F 74 -12.5 -2.92475 | overlap 430669 GAGGTGACGTAGACG CCGCGCAAC GCA GTCGCGCGG ATTTCTGGCGGTACA Bphy_0380 430707 - 431363 + | hypothetical protein Bphy_0381 431436 - 433235 + | aspartyl-tRNA synthetase TERM 476 433319 - 433291 - f 77 -11.8 -3.61652 | opp_overlap 433291 433292 433298, overlap 433292 433298 TGTGCAAAGAACCAA CGAAAAAGGCGC GTTAT GCGCCTTTTTCC TTTTTTGCGATAAAG TERM 477 433291 - 433319 + F 100 -12.5 -5.0538 | opp_overlap 433291 433292 433298, overlap 433292 433298 TGTGCAAAGAACCAA CGAAAAAGGCGCG TTA TGCGCCTTTTTCC TTTTTTGCGATAAAG TERM 478 433318 - 433292 - f 83 -15.3 -2.76509 | opp_overlap 433292 433291 433298, overlap 433291 433298 GTGCAAAGAACCAAC GAAAAAGGCGC GTTAT GCGCCTTTTTC CTTTTTTGCGATAAA TERM 479 433292 - 433318 + F 90 -16 -3.62746 | opp_overlap 433291 433292 433298, overlap 433291 433298 GTGCAAAGAACCAAC GAAAAAGGCGCG TTA TGCGCCTTTTTC CTTTTTTGCGATAAA TERM 480 433312 - 433298 - f 100 -8.5 -4.9445 | opp_overlap 433298 433292 433291, overlap 433292 433291 AGAACCAACGAAAAA GGCGC GTTAT GCGCC TTTTTCCTTTTTTGC TERM 481 433298 - 433312 + F 100 -9.2 -5.25735 | opp_overlap 433292 433291 433298, overlap 433292 433291 AGAACCAACGAAAAA GGCGCG TTA TGCGCC TTTTTCCTTTTTTGC Bphy_0382 433406 - 433882 + | NUDIX hydrolase TERM 482 433935 - 433956 + G 75 -3.7 -4.63218 | gap 1 GCATCTGCCCGGCCG GCGCTA-CTG GTC CAGGTATCGC TTTTGTTCCGGCAAC Bphy_0383 433879 - 435159 + | phospholipase D/transphosphatidylase TERM 483 435328 - 435365 + F 100 -9.2 -5.30616 | gap 1, overlap 435329 TAAATTTCTTGTTTC GCGGACGGTCG-GCCAT CAATA ATGGTACGACCGTTCGA TTTTTCTTTCGGTCA TERM 484 435329 - 435364 + F 84 -12.7 -3.77285 | gap 1, overlap 435328 AAATTTCTTGTTTCG CGGACGGTCG-GCCAT CAATA ATGGTACGACCGTTCG ATTTTTCTTTCGGTC TERM 485 435429 - 435419 - g 77 -8.2 -4.24711 | opp_overlap 435419 435418 GAAAAGGCGAACAAA CGCG AGC CGCG ATTCTCGATGCAGCA Bphy_0384 435400 - 436005 + | TetR family transcriptional regulator TERM 486 437650 - 437668 + G 73 -13.8 -2.87344 | opp_overlap 437638 437626 437648 437617 437649 GAACCCGGACGAAGT CGGCGCGG CCG CCGTGCCG TATCTGCGCACCGTC Bphy_0385 436100 - 437887 + | acyl-CoA dehydrogenase domain-containing protein TERM 487 437922 - 437897 - f 100 -21.9 -3.09933 | opp_overlap 437892 TTCTAAGCCATCGAA GGCGGCGCACG CGGC CGTGCGCCGCC CACCCTCTCTCACAC TERM 488 438214 - 438181 - g 91 -8.7 -4.7416 | CGAAAACCTGAAAAA GCTGTCGCCCGCGCC ATTC GGCGCGAAGGACGAC GCACAATACATTCAG TERM 489 438875 - 438819 - g 71 -9.2 -3.72576 | gap 1, opp_overlap 438850, overlap 438820 TCGCCGTCTACGAAA CGCCCGCCGTGCTGACCGGACTCGTGC AGCA GGGCGCGCTCGGCCAGAA-GACGGGCG CGGGCTTCTACAAGA Bphy_0386 438011 - 440455 + | 3-hydroxyacyl-CoA dehydrogenase NAD-binding Bphy_0387 440467 - 441666 + | acetyl-CoA acetyltransferase TERM 490 441678 - 441699 + F 70 -4.3 -4.62336 | gap 1, overlap 441678 441679 TTGATGTCTTGCTCG C-GGCGCGGC CCT GCCCTGCCAG TTTTTGAGCTGGCAT TERM 491 441790 - 441771 - f 72 -6.4 -4.26903 | overlap 441778 441780 GCCAGCGCAGGAAAA GGCAAAAC ACCC GCTTCGCC GGGGAAAGCATTCCA Bphy_0388 441843 - 442607 + | enoyl-CoA hydratase/isomerase Bphy_0389 443447 - 442626 - | formate dehydrogenase family accessory protein FdhD TERM 492 443901 - 443947 + G 81 -12.8 -3.57119 | opp_overlap 443890, overlap 443936 ACCAGGCGGAGCTTG CGGATCTTGCTGCGCCGAGCGC AGC GCAATGGGCGCAGCTGGAGCCG TTTCAGCGGTATGTG Bphy_0390 443564 - 444040 + | hypothetical protein TERM 493 444136 - 444118 - f 77 -11.7 -3.53091 | opp_overlap 444117 AGGTTGGCGCGTAAA GCGCTGC GCCCG GCAGCGC CTGTATCGCTCGCGT TERM 494 444643 - 444609 - g 79 -10 -4.07568 | gap 1, overlap 444588 CCGCGCTTGCGAAAA CCACGGCGCCCGAGC AGGACG GCTCACGCGCC-TGG GCCGCGCAGACCTAC TERM 495 444896 - 444847 - g 95 -14.9 -4.13767 | gap 1, opp_overlap 444871 444874 CGGCGCACGGGAAAA CGTCGCGCGGGAAAAGC-TGCGCG TCG CGCGCACGCTGCACCGGAGCGACG AGCGCTTTCGCGGGC Bphy_0391 444224 - 447346 + | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) Bphy_0392 447811 - 447404 - | thioesterase superfamily protein TERM 496 447457 - 447486 + g 79 -10.7 -4.15044 | opp_overlap 447458, overlap 447458 TGTCGGTCGCGACAT AGGTGAGGGTCGC TTCC GTGACCTTCACCG TTTCTTCCGCGAGGC TERM 497 447458 - 447485 + g 76 -14.2 -3.08812 | opp_overlap 447458, overlap 447457 GTCGGTCGCGACATA GGTGAGGGTCGC TTCC GTGACCTTCACC GTTTCTTCCGCGAGG Bphy_0393 448102 - 449997 + | ABC transporter related Bphy_0394 450772 - 450074 - | nucleotidyl transferase Bphy_0395 451830 - 450784 - | aminoglycoside phosphotransferase TERM 498 451028 - 451041 + g 82 -3.7 -5.06451 | opp_overlap 451009, overlap 451029 CCGAAGTCGGCATCG ACGGG CAGG CCCGC TTTTTTCGCGTGCTC TERM 499 451934 - 451952 + H 71 -11 -3.30771 | overlap 451935 TACCCCACGACTTTT TTGACGCG ACT CGCGTCAG TTCTCGCGCATCTCG TERM 500 452290 - 452256 - g 80 -15.6 -2.89564 | overlap 452288 GGCGCAGCCGATAGA CGCGCCGTGGGGCCTG CGG CTGGCCCCACAACTCG AAGAACATTCGACGC Bphy_0396 452101 - 454467 + | organic solvent tolerance protein TERM 501 454957 - 454922 - g 71 -7.4 -4.11692 | gap 1, overlap 454934 CATCCAGTTGCAAAA GGCGCG-CGAAGACGGC ATC ACCGTCGACGACGCGAC GGTGCAGCGCACACT TERM 502 455037 - 454997 - g 77 -11.9 -3.65046 | CGCCCAGGCGAACAA CTTGCAGCTCGACATGTAC CGC GCACGTATCGAGGCGCAAG GCGTGCCCTGGACGA Bphy_0397 454623 - 456014 + | SurA domain-containing protein TERM 503 457000 - 457030 + G 93 -6.7 -5.18357 | overlap 457003 GATCGACACCGCTGT TTTCATGGCGCGC AACCG GCGCGCCGCGTGA TTTTTTCGTAGCTTC Bphy_0398 456029 - 457030 + | 4-hydroxythreonine-4-phosphate dehydrogenase TERM 504 457323 - 457306 - g 70 -4.9 -4.44667 | gap 1 CGTCTGAAGAAGAAA TTCG-GCA ACC TGCTCGAA CTGCACGAAGGCGAC Bphy_0399 457051 - 457881 + | dimethyladenosine transferase TERM 505 457945 - 457969 + F 93 -11.4 -4.70583 | opp_overlap 457949, overlap 457949 GCACAGATCAGTGTA GACAGCCCGC AACAC GCGGGCTTTC TTTTATCTTCCTGAC TERM 506 457949 - 457965 + F 100 -10.8 -4.88163 | opp_overlap 457949, overlap 457945 AGATCAGTGTAGACA GCCCGC AACAC GCGGGC TTTCTTTTATCTTCC TERM 507 458031 - 458051 + F 71 -10.4 -3.57561 | gap 1 CGCTTGCCATTTGCG GCGGCTGCG CTGC CGC-GCCGC TTTAAGACATTCCCA Bphy_0400 458105 - 459232 + | porin Bphy_0401 459311 - 459697 + | lactoylglutathione lyase Bphy_0402 460604 - 459747 - | hypothetical protein TERM 508 459858 - 459875 + g 74 -12.7 -3.25823 | CGGACTATGGTTCAT CTCGCGC AAAT GCGCGAG TTCATGTGCGACGAC TERM 509 460503 - 460519 + g 79 -10.1 -4.08945 | overlap 460504 AGCAGCGGGCTTCGG TTGCGGC GGC GCCGCAG TTTTGCCCGGCTCGT Bphy_0403 461422 - 460664 - | phospholipid/glycerol acyltransferase TERM 510 461442 - 461462 + r 77 -10.3 -3.8917 | overlap 461443 461445 GTGGTCAGTGGGTGA GGGCGCGCG CTA CGCGCGTCA TTCTTGTACTTCGGC TERM 511 461443 - 461461 + r 77 -13.8 -2.9302 | overlap 461442 461445 TGGTCAGTGGGTGAG GGCGCGCG CTA CGCGCGTC ATTCTTGTACTTCGG TERM 512 461445 - 461459 + r 74 -12.8 -3.01074 | overlap 461443 461442 GTCAGTGGGTGAGGG CGCGCG CTA CGCGCG TCATTCTTGTACTTC TERM 513 461532 - 461484 - R 72 -8.8 -3.86015 | gap 2 TACTTCGGCGAGAAA GTCC-AGGGCGAACGCGCGCA-GA TCG TCATGCACGCGCGTGCCCTCGGGC AAACCGCCTGCTTCG Bphy_0404 462017 - 461460 - | histidinol-phosphate phosphatase family protein TERM 514 461789 - 461748 - G 77 -11.6 -3.79113 | gap 3, opp_overlap 461751 ATGCGGGCAGAAGAA CACCGCGTCGATGCGCCCGCC GAC GGCGGCCGC--CG-CGCGATG CATCTTCAGATGCAT Bphy_0405 464127 - 462028 - | glycyl-tRNA synthetase, beta subunit TERM 515 462252 - 462264 + g 76 -6.2 -4.58283 | overlap 462228 CAACCTGCTCAAGTT GCGC ATGCA GCGC TTTTTCGGCCGCTTC TERM 516 462982 - 463030 + g 73 -9.5 -3.84406 | gap 2, overlap 463021 CATTGCCGCAATTGC GC-CTGC-CAGCGCTTCGACGCG CTCGA CGCGTTGCAGCGCCGAGCCGAGC TTGTTGTGATAGACG Bphy_0406 465150 - 464143 - | glycyl-tRNA synthetase, alpha subunit TERM 517 465326 - 465336 + r 71 -8.2 -4.06384 | overlap 465319 465325 GGGGTGTGGCGGTTC GGCG GGG CGCC TTTGTGCTGTTCACG TERM 518 465379 - 465389 + r 70 -2.4 -4.72127 | TTTTGCCTCGATCTC AGGC GTT GCCG TTGTTTTTGTTCTTC Bphy_0407 467071 - 465377 - | apolipoprotein N-acyltransferase TERM 519 465739 - 465759 + g 77 -11.1 -3.72576 | CAGCCGGCGAGTCGC TCTCGCGCA CCG TGCGCGCGA TTTCCTCGCCGAAGA TERM 520 466362 - 466388 + g 88 -9.5 -4.65895 | gap 2, overlap 466366 ATCGCGATGCCGGCG CAGCGCGGGGCAG CGT CTGCC--GCGCTG TTTTTCGGTGCGCGC TERM 521 466366 - 466386 + g 84 -12.5 -3.94812 | overlap 466362 CGATGCCGGCGCAGC GCGGGGCAG CGT CTGCCGCGC TGTTTTTCGGTGCGC Bphy_0408 468004 - 467108 - | CBS domain-containing protein TERM 522 467926 - 467950 + g 82 -5.7 -4.75404 | opp_overlap 467925 CGGGCGAGATGAAGT CGGTCAATC GCTCGAG GAGTGACCG TTTTTCCTGGGGTTT TERM 523 468009 - 468032 + r 79 -13.8 -3.02461 | GAATCGTTCATGGTG GTGCGCCCGG AAAA CTGGGCGCGC TGTTGCAGAGCGTTA Bphy_0409 468806 - 468147 - | ChaC family protein TERM 524 468370 - 468343 - G 71 -4 -4.46212 | gap 1, overlap 468344 468347 CGCCGCATGACAAAA GCGA-GGGCATCG ACG CGCCGCCCATCGG CGAGTACGCACGGCA Bphy_0410 469353 - 468892 - | hypothetical protein Bphy_0411 470472 - 469384 - | PhoH family protein TERM 525 470391 - 470422 + g 71 -10 -3.65812 | overlap 470411 GCCGCAGGTTTTCGT CGAGCGGCCCGC AGAGGTTG GCGAGCCGCGCG TTGTCTTCGCGCGGC Bphy_0412 471875 - 470505 - | tRNA-i(6)A37 thiotransferase enzyme MiaB Bphy_0413 473115 - 472090 - | LysR family transcriptional regulator Bphy_0414 473226 - 473621 + | hypothetical protein Bphy_0415 473642 - 474820 + | major facilitator transporter TERM 526 475038 - 475057 + F 71 -11.4 -3.29144 | CCTTCACTAGTGCTT GCTCCGCG CCGG TGCGGAGC TTCTGGAGGCAATCA Bphy_0416 475072 - 475761 + | XRE family transcriptional regulator Bphy_0417 476228 - 476962 + | 3,4-dihydroxy-2-butanone 4-phosphate synthase Bphy_0418 477769 - 477083 - | HAD family hydrolase Bphy_0419 479397 - 477898 - | glycerol kinase Bphy_0420 481101 - 479566 - | FAD dependent oxidoreductase TERM 527 481019 - 481051 + g 72 -13.4 -3.14132 | gap 1, opp_overlap 481002 481016 AGCACGGAGAGACTG CGGCCCGCGGCGTCG CGCG CGATGCC-CGCGCCG TTGATCCCGCCACCG Bphy_0421 481314 - 481703 + | hypothetical protein TERM 528 481810 - 481779 - T 100 -15.9 -4.45168 | opp_overlap 481799 GCGTGAAAACATAAA GACGGTCAGGCGG GCAGTT CCGCGTGACCGTC CAGGCGTCCGTATGC Bphy_0422 482097 - 481900 - | hypothetical protein TERM 529 481967 - 481977 + g 70 -2.4 -4.61231 | CGCCATTGCTGCAAG CCCG ACG CGAG TTTTTCGAGCTCTAC Bphy_0423 483270 - 482491 - | DeoR family transcriptional regulator TERM 530 483003 - 483019 + g 81 -9.3 -4.30576 | TGTGGGTCGCGACGA GCGCCGC GAT GCGCCGC TTTTCGTCGTGGAAC TERM 531 483244 - 483274 + g 93 -4.6 -5.24129 | opp_overlap 483199, overlap 483247 CTGTTGACGTGCGTT CAGCGTGAGGCGGG GGT CTCGTGTCATGGTG TTTTTTGTGAGCACC TERM 532 483334 - 483370 + H 95 -6.4 -5.54264 | overlap 483336 483347 CCGTATTGTAAGACC TTCGTTGCCGTCGCCG TCGCC CGTCGTGGGCAGCGGA TTTTTTTGCGTGTTT TERM 533 483347 - 483369 + H 72 -9 -3.90118 | overlap 483336 483334 CCTTCGTTGCCGTCG CCGTCGCCCG TCG TGGGCAGCGG ATTTTTTTGCGTGTT Bphy_0424 483689 - 484516 + | hypothetical protein TERM 534 484492 - 484504 + F 72 -4.8 -4.62783 | CCCGCTCGCGAAGAT CACG CAGCA CGTG TTTTTCCGCTGAATG Bphy_0425 484555 - 485079 + | hypothetical protein TERM 535 485086 - 485113 + T 93 -13.4 -3.81027 | opp_overlap 485079 485082 GGCACATAGGAGCGG GACGTCCGCGGT GAAA GCGGCGGACGTC TTTGCATTGCTTCAG Bphy_0426 486693 - 485125 - | DEAD/DEAH box helicase domain-containing protein TERM 536 486334 - 486290 - G 84 -16.4 -2.80935 | gap 1 ATGTGATCGAGCAGA CGCCCTGGCGTCGCGACGACG ATGT CGACGCCGCGACG-CAGTGCA TCGATCTGCGGATTG Bphy_0427 487510 - 486890 - | hemolysin III family channel protein TERM 537 487300 - 487276 - G 75 -8 -4.29304 | gap 1 CGATCAGAAGATAAA TTGCAG-AGTG ATCA CACTTCTGCAA GATCGCCTTAAGACC TERM 538 487670 - 487629 - R 100 -12.9 -4.63527 | gap 1, overlap 487634 CCATCACCTCAAAAA GCGAAGGGCGCGGCCT-CGA TTA TCGCAGGCCGCGCCCCAACC CTTGAGACGATGCTC TERM 539 487665 - 487634 - R 100 -22.4 -3.45433 | gap 1, overlap 487629 ACCTCAAAAAGCGAA GGGCGCGGCCT-CGA TTA TCGCAGGCCGCGCCC CAACCCTTGAGACGA Bphy_0428 488982 - 487684 - | gluconate 2-dehydrogenase (acceptor) TERM 540 488817 - 488833 + g 86 -13.7 -3.73914 | opp_overlap 488806 TACAGTCACCCGCGC GGGCGAG GTA CTCGCCC TTCTTGATCAATGCT Bphy_0429 489722 - 489003 - | cytochrome c class I Bphy_0430 490109 - 490591 + | copper resistance protein CopC Bphy_0431 490588 - 491517 + | copper resistance D domain-containing protein Bphy_0432 491857 - 491555 - | hypothetical protein TERM 541 492123 - 492106 - R 100 -14.1 -3.8572 | opp_overlap 492106 GACAAGATGACCAAA CGCCGCC CGTA GGCGGCG TTGTGCTTCATTGGC TERM 542 492106 - 492123 + r 88 -14.1 -3.56727 | opp_overlap 492106 GACAAGATGACCAAA CGCCGCC CGTA GGCGGCG TTGTGCTTCATTGGC Bphy_0433 493305 - 492157 - | mandelate racemase/muconate lactonizing protein TERM 543 492891 - 492913 + g 71 -10.4 -3.62046 | TCACGGCTTTGAAGC CGCGCTCGAC GAC GGCGCGCGCG TTGTTCGCGACGTCG Bphy_0434 493390 - 494253 + | GntR domain-containing protein Bphy_0436 495065 - 495376 + | MarR family transcriptional regulator TERM 544 495402 - 495416 + T 78 -9.2 -4.00589 | TTTGTGCGTGACCGT GGCGGC AGC GCCGTC TTTGATCTCTTTTCC TERM 545 495458 - 495497 + T 100 -16.6 -3.73224 | opp_overlap 495458 495465, overlap 495465 GAACAGCTCGGGAAA TGAAAAAGCCGCTGTTTC GTGA GAAACAGCGGCTTTCGCA TTTGGTGGCGAATCA TERM 546 495497 - 495458 - T 100 -18.8 -3.55548 | opp_overlap 495458 495465, overlap 495465 GAACAGCTCGGGAAA TGAAAAAGCCGCTGTTTC GTGA GAAACAGCGGCTTTCGCA TTTGGTGGCGAATCA TERM 547 495465 - 495490 + T 100 -17.7 -3.73107 | opp_overlap 495458 495465, overlap 495458 TCGGGAAATGAAAAA GCCGCTGTTTC GTGA GAAACAGCGGC TTTCGCATTTGGTGG TERM 548 495490 - 495465 - T 100 -17.7 -4.98531 | opp_overlap 495465 495458, overlap 495458 TCGGGAAATGAAAAA GCCGCTGTTTC GTGA GAAACAGCGGC TTTCGCATTTGGTGG TERM 549 495631 - 495596 - T 93 -17.6 -3.25491 | gap 1, opp_overlap 495596 495598, overlap 495598 AAGGCAGATTATGAA GATGCCGC-CGGGGGCT GTC AACCCCCGCGCGGCAAC TTTTTGCGAGAACTC TERM 550 495596 - 495631 + T 100 -15.4 -4.57073 | gap 1, opp_overlap 495596 495598, overlap 495598 AAGGCAGATTATGAA GATGCCGC-CGGGGGCT GTC AACCCCCGCGCGGCAAC TTTTTGCGAGAACTC TERM 551 495629 - 495598 - T 100 -18.8 -3.18849 | gap 1, opp_overlap 495596 495598, overlap 495596 GGCAGATTATGAAGA TGCCGC-CGGGGGCT GTC AACCCCCGCGCGGCA ACTTTTTGCGAGAAC TERM 552 495598 - 495629 + T 85 -16.6 -2.60032 | gap 1, opp_overlap 495598 495596, overlap 495596 GGCAGATTATGAAGA TGCCGC-CGGGGGCT GTC AACCCCCGCGCGGCA ACTTTTTGCGAGAAC Bphy_0437 497322 - 495664 - | major facilitator transporter Bphy_0438 499097 - 497550 - | integral membrane sensor signal transduction histidine kinase Bphy_0439 499867 - 499106 - | two component transcriptional regulator TERM 553 499175 - 499190 + g 85 -11.8 -4.13767 | overlap 499176 CCCCGTTGTCTGCGG CGCCGC CTGA GCGGCG TTTTGCGCTGGCGCG TERM 554 499947 - 499979 + H 76 -13.6 -2.71144 | gap 1 TAGTTGGGTGTTGTC CGTTTGCGCATGTGG ACAT CCGCATGCG-AAACG TGCTTGCCAAAACTA TERM 555 500174 - 500158 - g 70 -5.1 -4.40358 | opp_overlap 500158, overlap 500160 500164 ACTGACTGCAGAAAA GAGCAAG GCA CTTGCTG CCGCGCTTGCGCAGA Bphy_0440 500114 - 501190 + | recA protein TERM 556 501261 - 501292 + G 87 -15.2 -3.64283 | AAGACGGGCGGTCCG CGTGACGACGATGC AATT GAGTCGTCGTCACG TTCTTCGAGCATTTC Bphy_0441 501198 - 501986 + | regulatory protein RecX Bphy_0442 502157 - 502894 + | hypothetical protein Bphy_0443 502950 - 504119 + | succinyl-CoA synthetase, beta subunit Bphy_0444 504234 - 505115 + | succinyl-CoA synthetase, alpha subunit TERM 557 505133 - 505166 + F 87 -16.9 -2.73875 | opp_overlap 505132 505141, overlap 505141 AGGGTTGCGATAAGC TCAAGAAACGCCGGT CGAC GCCGGCGTTTTTTGA TACTCTTGCGAAGGC TERM 558 505158 - 505141 - f 80 -9.8 -4.21989 | opp_overlap 505133 505141, overlap 505132 GATAAGCTCAAGAAA CGCCGG TCGACG CCGGCG TTTTTTGATACTCTT TERM 559 505141 - 505158 + F 100 -10.5 -5.2112 | opp_overlap 505141 505132, overlap 505133 GATAAGCTCAAGAAA CGCCGGT CGAC GCCGGCG TTTTTTGATACTCTT TERM 560 505204 - 505231 + F 100 -12 -5.4756 | opp_overlap 505204 AAGACGCAGCGACAA GCGAGGGAGCGA GCAA TTGCTGCCTCGC TTTTTTGTTGCCGTT Bphy_0445 505276 - 505989 + | integral membrane protein TerC TERM 561 506085 - 506122 + F 90 -16.4 -3.55071 | gap 1, opp_overlap 506089, overlap 506089 GCCGCTCGCTACGAT CG-AAGCGCCTGTCCTG ATTCC CGGGGCAGGCGCTTTCG TTTCGAGGAGTCTGC TERM 562 506117 - 506089 - f 73 -12.3 -3.09516 | opp_overlap 506085 506089 CTCGCTACGATCGAA GCGCCTGTCCTGA TTC CCGGGGCAGGCGC TTTCGTTTCGAGGAG TERM 563 506089 - 506117 + F 100 -16 -4.05788 | opp_overlap 506089, overlap 506085 CTCGCTACGATCGAA GCGCCTGTCCTG ATTCC CGGGGCAGGCGC TTTCGTTTCGAGGAG Bphy_0446 506140 - 506757 + | putative type IV fimbrial pilin protein TERM 564 507041 - 507061 + F 84 -6.8 -4.7497 | opp_overlap 507042, overlap 507042 CAATTGAAGCAGTAG ACGTGCTC CTTGT GAGCACGC TTTTTAGTGAATGCG TERM 565 507131 - 507172 + F 85 -16.5 -2.70275 | overlap 507150 CTGATTACCGTCAGG TCCCGCCCAGTCAGCGG CTTCACTC CCGCCGACAGGGCGGGG TGATGTGTGCAATTC TERM 566 507847 - 507862 + F 70 -11.8 -2.78627 | overlap 507844 507841 507841 507850 TTACTTGGTTAGATG CGGGCG CATG CGCCCG TACTGTGGTTTTTGT TERM 567 507920 - 507972 + F 80 -14.2 -2.78816 | gap 2, overlap 507921 507930 TGAGGTTTCTGTTGT TCCCCAGCGG--GGTGTGTCTTCCCC GCT GGGGGAGATGCGCCTTCTGCCGGGGA TCTAATCCAAGGTAG TERM 568 507930 - 507960 + F 82 -14 -3.29263 | overlap 507921 507920 GTTGTTCCCCAGCGG GGTGTGTCTTCCCC GCT GGGGGAGATGCGCC TTCTGCCGGGGATCT Bphy_0447 507997 - 509703 + | RNA-directed DNA polymerase TERM 569 510220 - 510236 + G 70 -2.1 -4.67556 | overlap 510218 AGCGGCGGCCTTTGC GCTGGTC GTC GGCGGGC TTTTTGCGGTCTTCT TERM 570 510951 - 510979 + G 88 -17.4 -3.12668 | overlap 510953 GGTTCGTGCGCGTGG TGCGCGCGCCGC ACACG GCGGCGCGCGTG TTCGGTCTCGCACTG TERM 571 510953 - 510977 + G 100 -20 -3.12327 | overlap 510951 TTCGTGCGCGTGGTG CGCGCGCCGC ACACG GCGGCGCGCG TGTTCGGTCTCGCAC Bphy_0448 509828 - 511618 + | O-antigen polymerase Bphy_0449 512181 - 511705 - | molybdenum cofactor biosynthesis protein C Bphy_0450 512380 - 514068 + | peptidase M48 Ste24p Bphy_0451 514661 - 514065 - | hypothetical protein Bphy_0452 515667 - 514654 - | putative hydrolase of the alpha/beta-hydrolase fold Bphy_0453 516264 - 515818 - | hypothetical protein Bphy_0454 517466 - 516441 - | lipopolysaccharide heptosyltransferase II TERM 572 516932 - 516977 + g 80 -14.1 -3.35813 | gap 2, opp_overlap 516924 516929 516926 GGCAGAAGACCAGCA GCGGTACGCGCGTGTCGAGGT TGAAGC GCGTCGACACGCGCG--CCGC TTCGTTCAGATCGGC TERM 573 517522 - 517494 - R 100 -15.2 -3.92542 | opp_overlap 517491 517490 CCGATGTCGAAATAA GGCGCCGCGCGC TCGAG GCGCACGGTGCC GGGGTTGTCGAGGAT Bphy_0455 517848 - 517654 - | hypothetical protein Bphy_0456 518843 - 517920 - | branched-chain amino acid aminotransferase TERM 574 518112 - 518124 + g 72 -6.9 -4.21275 | overlap 518116 CGTATAGACTTCGTC GCGCG TGA TGCGC TTTTCGATCACTTCG TERM 575 518499 - 518516 + g 79 -6.9 -4.56597 | GTGGATGGTGTTGCC CTTGGCG GACA CGCCCAG TTTTTCGGAGCCGAC Bphy_0457 519159 - 519914 + | AzlC family protein Bphy_0458 519911 - 520234 + | branched-chain amino acid transport Bphy_0459 520452 - 521645 + | phosphoglycerate kinase TERM 576 521694 - 521680 - f 73 -11.4 -3.34947 | overlap 521671 521683 CAACAAGCCTCAGAA GACGCG CAA CGCGTC GCGCACGGCAGCGAC Bphy_0460 522131 - 523567 + | pyruvate kinase TERM 577 523792 - 523779 - f 76 -3.1 -4.89393 | gap 1, overlap 523781 GAAATTGCACAAAAA GATGCC GTC GGCA-C AGATTTCGTTTCAAT Bphy_0461 523822 - 524886 + | fructose-bisphosphate aldolase, class II TERM 578 524905 - 524922 + F 79 -12.7 -3.41602 | GTTGTTGCGCACGCA CCTGGCC ATCC GGCCAGG TTGTCGTCAGATCGC TERM 579 524935 - 524964 + F 91 -12.9 -3.99986 | gap 1, overlap 524954 AGGTTGTCGTCAGAT CGCCGTTC-CCGCA TGA TCCGGGGAACGGCG TTTCCCTTTTGTTCC TERM 580 524954 - 524970 + F 86 -8.7 -4.63218 | overlap 524935 GTTCCCGCATGATCC GGGGAAC GGC GTTTCCC TTTTGTTCCGGGCGG TERM 581 525455 - 525439 - g 71 -7.9 -4.08216 | overlap 525448 CGAGGGTCTGCAAAA CGCGCAG AAG CTGCCCG AGCCGATCTTCACGC Bphy_0462 525017 - 525907 + | phosphoribosylaminoimidazole-succinocarboxamide synthase Bphy_0463 525932 - 526441 + | phosphoribosylaminoimidazole carboxylase, catalytic subunit Bphy_0464 526516 - 527724 + | phosphoribosylaminoimidazole carboxylase, ATPase subunit Bphy_0465 527737 - 528780 + | Sua5/YciO/YrdC/YwlC family protein TERM 582 528841 - 528816 - T 100 -20.5 -4.85782 | opp_overlap 528816 CCTTCCAAAAACAAA GAGCCCGGCTC GCGA GAGCCGGGCTC TTTTGCATCGCAGGA TERM 583 528816 - 528841 + T 100 -20.5 -4.18018 | opp_overlap 528816 CCTTCCAAAAACAAA GAGCCCGGCTC GCGA GAGCCGGGCTC TTTTGCATCGCAGGA Bphy_0466 530082 - 528871 - | GDSL family lipase TERM 584 530047 - 530008 - G 93 -17.2 -3.54741 | gap 1, overlap 529995 GACGAGCGTCGCAAA TGCCGCGCATGCGACGGCG ATC CGC-GCCGCACGCACGACA TGCACGACGCCAGTG Bphy_0467 530670 - 530287 - | hypothetical protein TERM 585 530865 - 530892 + r 90 -10.6 -4.66264 | gap 1, opp_overlap 530858 530864, overlap 530866 CTTCAATAGAAGGAT TCCTCAGTG-CGC GCC GCGGCGCTGAGGG TTTTTCCGGATTTTG TERM 586 530866 - 530891 + r 76 -11.9 -3.38674 | gap 1, opp_overlap 530858 530864, overlap 530865 TTCAATAGAAGGATT CCTCAGTG-CGC GCC GCGGCGCTGAGG GTTTTTCCGGATTTT Bphy_0468 532421 - 530868 - | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase TERM 587 532438 - 532401 - G 84 -11.8 -3.96216 | GGCGCACGCAAACAA CACGGCGGCAGCGCGC GACACG GCGCGAGGCCTCCGCG ACGGCGGCACGAAAC Bphy_0469 532855 - 533517 + | two component transcriptional regulator Bphy_0470 533522 - 534823 + | integral membrane sensor signal transduction histidine kinase Bphy_0471 534937 - 536439 + | protease Do TERM 588 536556 - 536522 - f 90 -10.7 -4.65895 | gap 1, opp_overlap 536523, overlap 536523 CCGGTCATGGAAAAA GTGGCGGTTCGCTGCG TGTT CG-AGCGAGCCGCCAT TCTTCGTACAGGTCC TERM 589 536555 - 536523 - f 87 -14.2 -3.39216 | gap 1, opp_overlap 536523, overlap 536522 CGGTCATGGAAAAAG TGGCGGTTCGCTGCG TGTT CG-AGCGAGCCGCCA TTCTTCGTACAGGTC TERM 590 536523 - 536555 + F 100 -16.4 -3.72324 | gap 1, opp_overlap 536523 536522 CGGTCATGGAAAAAG TGGCGGTTCGCTGCG TGTT CG-AGCGAGCCGCCA TTCTTCGTACAGGTC TERM 591 536596 - 536578 - f 73 -13.1 -2.72049 | TACAGGTCCGAATTA GGCGGCG CTCCC CGCCGCC ACGCAATGCGTACGC Bphy_0472 536681 - 537178 + | hypothetical protein TERM 592 537371 - 537387 + F 72 -9.3 -3.77196 | opp_overlap 537368 ATGTGCTACGAAGGG CGCGCAG GCG CGGCGCG TTTGGTCAATAATGA TERM 593 537404 - 537424 + F 84 -12.6 -3.66178 | opp_overlap 537400 537404 537408 TTGGTCAATAATGAA GCCACGGA CACGC TCCGTGGC TTTCGCATTCGAAGC TERM 594 537424 - 537404 - f 81 -12.6 -3.53444 | opp_overlap 537404, overlap 537400 537408 TTGGTCAATAATGAA GCCACGGA CACGC TCCGTGGC TTTCGCATTCGAAGC Bphy_0473 537575 - 538018 + | hypothetical protein Bphy_0474 538052 - 538798 + | carbon monoxide dehydrogenase subunit G Bphy_0475 539938 - 538886 - | AraC family transcriptional regulator TERM 595 540557 - 540535 - g 73 -12.6 -3.40403 | GGTGCCCTATGAGAA CAGCGCGGGC TTT GCCAGCGCCG AAGAAATTCATCGCG Bphy_0476 540086 - 540715 + | isochorismatase hydrolase Bphy_0477 541443 - 540808 - | TetR family transcriptional regulator Bphy_0478 541870 - 543120 + | RND family efflux transporter MFP subunit TERM 596 544519 - 544575 + G 71 -9.4 -3.69323 | gap 1, overlap 544522 TGGCGTTCTCGGGCG GTTCGGTCGGCGCGATCTATCGTCAGT TCTC GCTGACGATCG-TCGCGGCGATGGTGC TTTCCGTGCTGGTCG Bphy_0479 543138 - 546332 + | hydrophobe/amphiphile efflux-1 (HAE1) family protein TERM 597 546628 - 546664 + G 100 -20.2 -3.02144 | opp_overlap 546623 GTGCTGAACATCGAG GCTTCGCGCGCGCAAT ATCAG ATTGCGCGCGCGGCGC TGTTCCCGGCGCTCG TERM 598 547047 - 547082 + G 72 -11 -3.53012 | overlap 547075 547078 GGCTCAGACCGTTGT CGAGCAGGCGACTGCG AACC TGCAGTCGCAGGCGCG TTTGCGGGCGCAGGC TERM 599 547372 - 547411 + G 75 -13.6 -3.01712 | gap 1, opp_overlap 547369 CTGTTCAAGCCAGGT TCGGCGGCGTGGAGCTTCG CGC CGACGATC-ACGCTGCCGA TCTTCGAAGGCGGCC TERM 600 547780 - 547804 + G 77 -15.7 -2.52464 | opp_overlap 547744 547768 547770 GAACATGCAGGCGAT CAGCCGCGTCC GGC GGACGCGCCTG TCGATTACGGCGCGG Bphy_0480 546343 - 547860 + | RND efflux system outer membrane lipoprotein TERM 601 547924 - 547905 - T 100 -15 -4.13767 | opp_overlap 547905 TTTCCGACTGCAAAA CGCCACGG CATG CCGTGGCG TTTTTTTTGCGCGCT TERM 602 547905 - 547924 + T 100 -15 -5.75945 | opp_overlap 547905 TTTCCGACTGCAAAA CGCCACGG CATG CCGTGGCG TTTTTTTTGCGCGCT Bphy_0481 549521 - 548106 - | xanthine permease TERM 603 549360 - 549347 - G 83 -2.4 -5.21709 | TCCCACAGGAAAAAA GATC GGCGCT GATC AGAAAGGCGATTTGC Bphy_0482 549945 - 551369 + | carbohydrate kinase FGGY TERM 604 551902 - 551874 - g 81 -10.9 -4.1891 | opp_overlap 551854 GTCGCGCAAGACAAA CCTGTGTCAGGCG ATC CGCGCGACGCAGG GCAAGGGCCTGATGC Bphy_0483 551563 - 552669 + | S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase TERM 605 552750 - 552770 + G 75 -7.6 -4.29325 | gap 1 AGCCACGAGTCGAAG GCG-ATCGG CTTG CCGATGCGC TTTTCCGTCTTCATG TERM 606 552923 - 552869 - g 80 -14.9 -3.14344 | gap 2, overlap 552899 GACGTTTCCGATCAA GGCGGGCGCG--CAGCGCTTCGCCGCA CAG CACGGCATCGCGCTGATCGCGCCCGAC ACCAGTCCGCGCGGC Bphy_0484 552681 - 553526 + | S-formylglutathione hydrolase TERM 607 553581 - 553557 - T 100 -17.2 -4.61873 | opp_overlap 553557 GTGTAGAAAGCAAAA CGGGGTGGCT CCTTT AGCCACCCCG TTTCTTTTCGCGCTA TERM 608 553557 - 553581 + T 100 -17.2 -4.65933 | opp_overlap 553557 GTGTAGAAAGCAAAA CGGGGTGGCT CCTTT AGCCACCCCG TTTCTTTTCGCGCTA Bphy_0485 554385 - 553594 - | ABC-3 protein Bphy_0486 555307 - 554378 - | ABC transporter related TERM 609 555035 - 554993 - G 80 -14.7 -3.15663 | gap 1 AGCCATCGCCACGAA GTCGCGACCGCGCACGCGCC GGCC GGCGAGCGCGCTG-CGCGTC TGCGGCATATAGCCG Bphy_0487 556233 - 555304 - | periplasmic solute binding protein Bphy_0488 556782 - 556291 - | ferric uptake regulator family protein TERM 610 556869 - 556847 - H 87 -4.1 -5.42259 | opp_overlap 556865 GTATCTCGAAAAAAA TGTCATTGC CCGTT GCAACGTCA TCGCCGATTCTTAAT Bphy_0489 557071 - 557853 + | short-chain dehydrogenase/reductase SDR TERM 611 558156 - 558140 - g 85 -7.9 -4.63932 | GATTCTGGAAGAAAA CGTGCTG CGT CAGCGCG CGACGACGGACATCA TERM 612 559106 - 559088 - g 77 -12.4 -3.60627 | opp_overlap 559081 GCATCCGACGGCAAA GCCCGTGC CGT ACACGGGC GTGCAGTTCGTCGGT Bphy_0490 557943 - 559265 + | extracellular solute-binding protein TERM 613 559427 - 559387 - f 79 -12.5 -3.3785 | overlap 559388 GGAACCGATGCACAA CGCCGGCCGACAGTGCAGT TCA ACTGCATCGTCAGCCGGAC TCCTGGCAGCACAGT TERM 614 559426 - 559388 - f 84 -16 -2.62389 | overlap 559387 GAACCGATGCACAAC GCCGGCCGACAGTGCAGT TCA ACTGCATCGTCAGCCGGA CTCCTGGCAGCACAG Bphy_0491 559490 - 560428 + | binding-protein-dependent transport systems inner membrane component Bphy_0492 560425 - 561291 + | binding-protein-dependent transport systems inner membrane component Bphy_0493 561288 - 561980 + | HAD family hydrolase Bphy_0494 562070 - 563179 + | ABC transporter related TERM 615 563201 - 563235 + F 87 -15.8 -2.91593 | opp_overlap 563201 563204, overlap 563205 GCGTTACATCGCAAA CAGGGCGCCGTTGC TATCGCT GCAACGGCGCTTTG CTTTATGAAAGACTC TERM 616 563235 - 563201 - f 78 -11.4 -3.63627 | opp_overlap 563201 563205, overlap 563204 GCGTTACATCGCAAA CAGGGCGCCGTTGC TATCGCT GCAACGGCGCTTTG CTTTATGAAAGACTC TERM 617 563205 - 563231 + F 100 -15.2 -4.13995 | opp_overlap 563204 563201, overlap 563201 TACATCGCAAACAGG GCGCCGTTGC TATCGCT GCAACGGCGC TTTGCTTTATGAAAG TERM 618 564837 - 564858 + G 71 -9.3 -3.71527 | overlap 564829 CCTCGCCGCGCTCGA GCCGCTCGC TTCC GTGCGCGGC TTTGCGTGGTTCGCG Bphy_0495 563428 - 565206 + | TPR repeat-containing protein Bphy_0496 566203 - 565235 - | DeoR family transcriptional regulator Bphy_0497 567799 - 566315 - | xylulokinase TERM 619 566410 - 566372 - G 77 -12.5 -3.56987 | CACATGACGATACAA CGCGCGATAGCTG-GCGAG CCG CTCGCGCAGC-ACCGCGTG CCGCTGCGGATTCGG TERM 620 567649 - 567614 - G 75 -12.5 -3.53761 | gap 1, opp_overlap 567619, overlap 567615 GAACTGTTCCGCAAA GCGCTCGCGCAGCGCG AACAG CGCGGTGCGCGTGC-C TTGCCACCAGTCGGA TERM 621 567619 - 567645 + g 73 -15.1 -2.52543 | opp_overlap 567614 567615 GTTCCGCAAAGCGCT CGCGCAGCGCG AACAG CGCGGTGCGCG TGCCTTGCCACCAGT Bphy_0498 569379 - 567970 - | mannitol dehydrogenase domain-containing protein TERM 622 568823 - 568855 + g 77 -13.4 -3.30771 | AGGAACTGCGTCATG CCTGCGCGGAAGCG CTCGC CGTTGCTGCGCAGG TTATCGCACGTCTGC TERM 623 570821 - 570805 - g 78 -13.7 -3.20723 | opp_overlap 570808, overlap 570808 CTTCCAGCAACTGAA CGACGCG AGC CGCGTCG CTTCCGAAGCGGCAG TERM 624 570931 - 570891 - g 90 -15.4 -3.53012 | gap 1, opp_overlap 570882 TGCCCGCCGCGCAAA CGCAGGTTCATGCGCACGG CCAG CCGCGCGC-CGCACCCGCG CATCCGCCTCGCGGT Bphy_0499 569948 - 570967 + | AraC family transcriptional regulator Bphy_0500 571056 - 572021 + | periplasmic binding protein/LacI transcriptional regulator TERM 625 572304 - 572336 + G 81 -13.4 -3.57561 | CACTTCATGAGCTAT CACGATGCCGTGGC GGCCG GCGTCGGCATCGTG TTTCAGGAGTTCAGC Bphy_0501 572085 - 573620 + | ABC transporter related Bphy_0502 573607 - 574608 + | monosaccharide-transporting ATPase TERM 626 575445 - 575428 - g 74 -10.5 -3.7108 | opp_overlap 575438, overlap 575405 ATGTCTACATCGAAA CGACGGG CGTG CCCGCCG GCGTGAATCAGGGCA Bphy_0503 574653 - 575741 + | alcohol dehydrogenase TERM 627 575803 - 575770 - f 78 -6 -4.62069 | gap 1, overlap 575774 CCGTCATTCGAAAAA TGCACAGTGCGCGTC GTGCA GACGCGCAC-ACGGA GACACTATGAATTAC Bphy_0504 575810 - 577354 + | xylulokinase Bphy_0505 577351 - 578091 + | short-chain dehydrogenase/reductase SDR Bphy_0506 579175 - 578240 - | tryptophan 2,3-dioxygenase Bphy_0507 580436 - 579186 - | kynureninase TERM 628 579496 - 579510 + g 70 -2.1 -4.59773 | gap 1 TCGATGAACAGATCC GTCAGC GCCA GC-GAC TTTTTGCGGATCGCC Bphy_0508 581112 - 580483 - | arylformamidase Bphy_0509 581244 - 581747 + | AsnC family transcriptional regulator Bphy_0510 582321 - 581797 - | flavin reductase domain-containing protein Bphy_0511 582616 - 583167 + | peptide methionine sulfoxide reductase TERM 629 583237 - 583252 + T 100 -11.8 -5.26119 | GCCGTTGTTCGACTA CGCGGC TTCG GCCGCG TTTTCTTTTTGCGCG Bphy_0512 584373 - 583234 - | hypothetical protein TERM 630 584220 - 584235 + g 72 -8.2 -4.08216 | GGGAAGCGGCGAGGA CGTCGC GGGC GCGGCG TTTTCCAGGCGGTGG Bphy_0513 585670 - 584456 - | cyclopropane-fatty-acyl-phospholipid synthase Bphy_0514 586484 - 585846 - | pyridoxamine 5'-phosphate oxidase TERM 631 586106 - 586126 + g 72 -8.2 -4.16016 | GCGAGCCGACGGGAC GCGAAGCG AAGTA CGCATCGC TTTCTTCGGGACTCG Bphy_0515 586736 - 587596 + | UBA/THIF-type NAD/FAD binding protein TERM 632 587645 - 587629 - T 100 -10.8 -5.26875 | opp_overlap 587629 GCGTGAATCAAAAAA CGCGGC TCGTG GCCGCG TTCTTTCGTAGTCGC TERM 633 587629 - 587645 + T 85 -11.5 -4.0274 | opp_overlap 587629 GCGTGAATCAAAAAA CGCGGCT CGT GGCCGCG TTCTTTCGTAGTCGC Bphy_0516 588535 - 587687 - | thioredoxin Bphy_0517 589530 - 588649 - | pirin domain-containing protein TERM 634 589462 - 589439 - G 73 -13.9 -2.81312 | overlap 589426 AACGGACCGACGAGA CGTGCTGCC ATCGCG GGCAGCACG CGCCGCACGGCGAGA TERM 635 589699 - 589689 - H 74 -2.4 -4.96646 | CGATACAAGTAAAAA CAGG AGT CCAG ATGTCGCCGAAAGAC TERM 636 589968 - 589990 + G 77 -5.4 -4.62471 | overlap 589961 589982 CGGCAGGTCTTGCGT CGCTCGTGCT GCA GGCGCAGGCG TTTTTCACGCTTGGC TERM 637 589999 - 590015 + G 83 -5.7 -4.87665 | overlap 589982 GCAGGCGTTTTTCAC GCTTGGC TTT GCCGCGC TTTTTCTGCATGAGC Bphy_0518 589700 - 590581 + | hypothetical protein TERM 638 590621 - 590633 + T 70 -4.7 -4.45175 | overlap 590622 ATTCTTGCATGCGGC GCGGC TTT GCCGG TTTGGTTTTTTGCTC Bphy_0519 592258 - 590711 - | N-acetylmuramoyl-L-alanine amidase Bphy_0520 592794 - 592240 - | hypothetical protein TERM 639 593137 - 593100 - g 71 -9.2 -3.76781 | opp_overlap 593100 593103 593127 AAACATGGGATGAAA CGTGCGCG-GCCAGCC GAGCTTGT GGCCGGCACGCG-ACG CGTGATCTCGGTTCG Bphy_0521 592812 - 594104 + | iron-sulfur cluster binding protein Bphy_0522 594145 - 594615 + | methylated-DNA--protein-cysteine methyltransferase Bphy_0523 594612 - 595559 + | tyrosine recombinase XerD Bphy_0524 597161 - 595584 - | AMP-dependent synthetase and ligase Bphy_0525 597309 - 597836 + | ybaK/ebsC protein TERM 640 598455 - 598467 + G 70 -5.5 -4.32857 | overlap 598438 598451 GGCGATCTTCGCGCC GCTGT TCG ACGGC TTTCTGTTTGGCGCG TERM 641 598607 - 598597 - g 84 -8.2 -4.51812 | overlap 598575 598598 598599 GGCGACAAGAAGAAA GCCG AAG CGGC GGCTTCGCACAAGCA Bphy_0526 597994 - 598626 + | hypothetical protein Bphy_0527 599187 - 598702 - | hypothetical protein TERM 642 599102 - 599137 + g 78 -3.9 -4.75174 | gap 1 CCCTTGAAGTCGAAG CGCG-TCGAGATTTCC TTGTT GGACTGCTCGATCGCG TTTTTCACTTCGATC Bphy_0528 599359 - 600399 + | UDP-N-acetylenolpyruvoylglucosamine reductase TERM 643 600439 - 600471 + T 86 -12 -4.07568 | opp_overlap 600444, overlap 600444 CGCGAGCCTGAAAAC AAAAAGCGCCGGGT GTCGA ACCCGGCGCTTATG TTTTGCGGACGGCGC TERM 644 600466 - 600444 - T 100 -16.3 -5.45802 | opp_overlap 600439 600444 GCCTGAAAACAAAAA GCGCCGGGT GTCGA ACCCGGCGC TTATGTTTTGCGGAC TERM 645 600444 - 600466 + T 100 -16.3 -3.95435 | opp_overlap 600444, overlap 600439 GCCTGAAAACAAAAA GCGCCGGGT GTCGA ACCCGGCGC TTATGTTTTGCGGAC Bphy_0529 601428 - 600499 - | ornithine carbamoyltransferase TERM 646 600540 - 600559 + g 70 -5.6 -4.20696 | overlap 600538 600556 GAAATTCCATCAGCG CCTTCTGC ACGT GCAGGCGG TTTTCCGCTTCGTCC Bphy_0530 601890 - 602225 + | hypothetical protein TERM 647 602268 - 602281 + T 100 -9.5 -5.74122 | opp_overlap 602268 AGGACGGCAATGAAA CCCGC ATCG GCGGG TTTTTTTATGTCCTC TERM 648 602281 - 602268 - T 75 -9.5 -3.92178 | opp_overlap 602268 AGGACGGCAATGAAA CCCGC ATCG GCGGG TTTTTTTATGTCCTC TERM 649 602374 - 602345 - T 81 -12.9 -3.55815 | opp_overlap 602352, overlap 602352 AAACAGCGCGCCAAA CAAAAAAGCCCGC CAGA GCGGGCTTTCATG ACGCAGCGGAAACAG TERM 650 602352 - 602367 + T 81 -11.8 -3.72576 | opp_overlap 602345 602352 GCGCCAAACAAAAAA GCCCGC CAGA GCGGGC TTTCATGACGCAGCG TERM 651 602367 - 602352 - T 100 -11.8 -5.63517 | opp_overlap 602352, overlap 602345 GCGCCAAACAAAAAA GCCCGC CAGA GCGGGC TTTCATGACGCAGCG TERM 652 602414 - 602393 - T 73 -11.5 -3.46285 | CAGCGGAAACAGGAA GCGGCCCGC CGAA GCGAGCCAC CGGATTCGTGAATTT Bphy_0531 602706 - 602428 - | ribosomal protein S20 TERM 653 602469 - 602497 + g 74 -10.3 -3.79678 | overlap 602465 602472 602495 CCTTGACGGCTGCAG CGAGGCGGCTC TTATGGC GAGCTGCCTTG TTCTTGTGAACGATT TERM 654 602472 - 602494 + g 72 -8.4 -4.02817 | overlap 602465 602469 TGACGGCTGCAGCGA GGCGGCTC TTATGGC GAGCTGCC TTGTTCTTGTGAACG TERM 655 602495 - 602510 + g 78 -4 -4.77165 | overlap 602469 602497 TTATGGCGAGCTGCC TTGTTC TTGT GAACGA TTTTCTTGTCGGCAA TERM 656 602733 - 602763 + H 80 -9.6 -4.18018 | overlap 602734 602736 ATCCTGTTCCTGTTT CCAGTGCCCGCCTT CGA AGGGCAGGCGCTGC TTTTAGATCGAACCC TERM 657 602734 - 602762 + H 76 -13.1 -3.10597 | overlap 602733 602736 TCCTGTTCCTGTTTC CAGTGCCCGCCTT CGA AGGGCAGGCGCTG CTTTTAGATCGAACC TERM 658 603672 - 603714 + G 80 -14.8 -3.14344 | overlap 603668 CTCGCTGCCCGCGTT CGCGCCCGTGCTGCTGAACG TCT CGTTCATCATCGCGGCCGTG TTCGTCGCGCCGCTC Bphy_0532 603187 - 604737 + | integral membrane protein MviN Bphy_0533 604734 - 605585 + | hypothetical protein TERM 659 605648 - 605609 - T 100 -20.2 -3.53012 | opp_overlap 605615, overlap 605610 605615 GTCCGTCGCTGCAAA CGAAAACGCCTGCGCAGC TTTC ACTACGCAGGCGTTTTCA TTCCAGCGCTATCGG TERM 660 605647 - 605610 - T 100 -21.5 -2.71712 | opp_overlap 605615, overlap 605609 605615 TCCGTCGCTGCAAAC GAAAACGCCTGCGCAGC TTTC ACTACGCAGGCGTTTTC ATTCCAGCGCTATCG TERM 661 605642 - 605615 - T 100 -15.6 -4.54727 | opp_overlap 605615, overlap 605610 605609 CGCTGCAAACGAAAA CGCCTGCGCAGC TTTC ACTACGCAGGCG TTTTCATTCCAGCGC TERM 662 605615 - 605642 + T 93 -12.7 -4.4078 | opp_overlap 605615 605610 605609 CGCTGCAAACGAAAA CGCCTGCGCAG CTTTCA CTACGCAGGCG TTTTCATTCCAGCGC Bphy_0534 606424 - 605666 - | short-chain dehydrogenase/reductase SDR TERM 663 606625 - 606608 - R 100 -9.8 -5.63517 | TGCCCAAATAAAAAA CCCGCC GTGAGA GGCGGG TTCCCGATGTGCTAC Bphy_0535 607317 - 606652 - | nucleoside-triphosphate--adenylate kinase Bphy_0536 608382 - 607579 - | 3-deoxy-D-manno-octulosonate cytidylyltransferase TERM 664 608442 - 608420 - R 88 -14.1 -3.52906 | opp_overlap 608419 608420, overlap 608418 CGAGGCTGAGAAAGA CGCACCGCC TCGAT GGCGGCGCG GTGTGTGCGTTCGGA Bphy_0537 608717 - 608514 - | hypothetical protein Bphy_0538 609714 - 608698 - | tetraacyldisaccharide 4'-kinase TERM 665 611318 - 611342 + G 70 -11.3 -3.37796 | GTCGGCGGGTGTGCG GCCCGTGCGCG ATG CGCGTGCGCGC TTCTCGCTCGTGCAG Bphy_0539 610302 - 611681 + | exodeoxyribonuclease VII, large subunit TERM 666 611755 - 611767 + F 82 -10.5 -4.11216 | opp_overlap 611730 611748 611750 GCATTAATTACGCTG CGCGC ACA GCGCG TTTTCGCAATGAACG Bphy_0540 611889 - 612467 + | superoxide dismutase TERM 667 612534 - 612517 - T 90 -11.3 -4.2558 | opp_overlap 612517 CAGCGTCGACGAAAA GCCCTCA TTCA TGAGGGC TTTTTCTTTTTCAGA TERM 668 612517 - 612534 + T 100 -11.3 -5.61881 | opp_overlap 612517 CAGCGTCGACGAAAA GCCCTCA TTCA TGAGGGC TTTTTCTTTTTCAGA TERM 669 612672 - 612651 - T 100 -10.8 -5.1861 | opp_overlap 612651 612657 CGCAGCAGTAAAAAA GCGCCACG CCGTAC CGCGGCGC TTTCACATGACGTCT Bphy_0541 614011 - 612689 - | hypothetical protein TERM 670 613936 - 613958 + g 72 -9 -4.11216 | ATTTCTCGTATTTCG CATCGCGCAC GCC GAGCGCGACG TTTTCGAAATCACAG Bphy_0542 614698 - 614099 - | isochorismatase hydrolase TERM 671 614223 - 614199 - G 75 -6.4 -4.34402 | gap 1, opp_overlap 614200 614202 TGCTCGACAGGAAAA CGGTGCGTGTC GGCC GACAGGC-CCG ACATCGCGTCTTCGA TERM 672 614579 - 614536 - G 95 -13 -4.26076 | gap 1, overlap 614539 614540 CGACGCGCACGAAAA CAACCGTGCCGCCCGCCGCGC GCA GCGCATCGG-CGGCACGCACG GAACGCGCGACGACG TERM 673 614576 - 614539 - G 100 -15.5 -4.25256 | gap 1, overlap 614536 614540 CGCGCACGAAAACAA CCGTGCCGCCCGCCGCGC GCA GCGCATCGG-CGGCACGC ACGGAACGCGCGACG TERM 674 614575 - 614540 - G 93 -19 -3.14672 | gap 1, overlap 614539 614536 GCGCACGAAAACAAC CGTGCCGCCCGCCGCGC GCA GCGCATCGG-CGGCACG CACGGAACGCGCGAC TERM 675 614785 - 614773 - g 81 -7.7 -4.53034 | overlap 614775 614776 CTCAGATAATCAAAA GATGC GGC GCATC CCGCGACAGGAACGT Bphy_0543 614747 - 615358 + | TetR family transcriptional regulator Bphy_0544 616033 - 615380 - | ATP-dependent Clp protease, proteolytic subunit ClpP TERM 676 615939 - 615913 - G 75 -10.1 -3.91882 | opp_overlap 615913, overlap 615908 CGACCAGAAACACAA TCCGCTCGCGC AAGAG GCGCGAGTAGA TGTCGTAGGCGCGCT TERM 677 616699 - 616673 - g 75 -10.1 -3.9122 | gap 1, overlap 616670 CATCGCGCGAAAGAA CGCCTGCAGCGC CAAG GCG-TGCCGGCG AAGCGGGCCGATCCC TERM 678 616759 - 616787 + G 70 -5.2 -4.37886 | gap 1, opp_overlap 616759 GCGGGCGGCAATGGA GGCGCAGGATCGC GTGG GCC-TCGTGCGCC TTTTCTGCGACGTGC Bphy_0545 616193 - 617152 + | ECF subfamily RNA polymerase sigma-24 factor Bphy_0546 618382 - 617108 - | diguanylate phosphodiesterase Bphy_0547 620122 - 618653 - | EmrB/QacA family drug resistance transporter Bphy_0548 621650 - 620238 - | transcriptional regulator TERM 679 620304 - 620271 - G 87 -5.9 -5.00616 | gap 1, opp_overlap 620272 620273, overlap 620273 620274 TGCCGCTTCAAAAAA CATCCGCGCACGCG GCTCATT CGCGAACGCGG-CG TTGATGCGAATCCAC TERM 680 620303 - 620273 - G 71 -7.4 -4.13561 | opp_overlap 620272 620273, overlap 620271 620274 CCGCTTCAAAAAACA TCCGCGCACGCG GCTCATT CGCGAACGCGGC GTTGATGCGAATCCA TERM 681 621825 - 621812 - H 75 -3.7 -4.75174 | GATGCAAGCGAAAAA GCACC TCAA GGAGC AAAACGATGCGCGAA Bphy_0549 621832 - 622143 + | hypothetical protein Bphy_0550 623414 - 622170 - | citrate synthase TERM 682 622343 - 622375 + g 77 -15.5 -2.62184 | CGCGCTCGATGGCCG CGAGCGCGTAGTCGA CGG TCGGCTCCGCGCCCG TCGTGTCGCGCACGG TERM 683 623026 - 623065 + g 80 -17 -2.52464 | gap 1 GACCATTGAGCAGCC GCGAGCGGCGCGGCGGGCG CGG CGAC-GACGCGCCGCGCGC TGCATTCCCACAGCA Bphy_0551 623533 - 624927 + | L-carnitine dehydratase/bile acid-inducible protein F Bphy_0552 625701 - 624955 - | GntR family transcriptional regulator Bphy_0553 625881 - 626726 + | aldo/keto reductase Bphy_0554 626781 - 627248 + | hypothetical protein Bphy_0555 629527 - 627422 - | oligopeptide/dipeptide ABC transporter, ATPase subunit Bphy_0556 630423 - 629524 - | binding-protein-dependent transport systems inner membrane component Bphy_0557 631430 - 630420 - | binding-protein-dependent transport systems inner membrane component TERM 684 631379 - 631365 - G 72 -12.8 -3.14132 | GCGTGTCGCCACGAA GCGCGC GAT GCGCGC TGCACTGCTGCCTGA Bphy_0558 633145 - 631460 - | extracellular solute-binding protein TERM 685 632471 - 632489 + g 71 -10.2 -3.56325 | GTTGCCCGCGTAATT CGCGGGCA GGA TGACCGCG TTGTAGTTGTCCGAC TERM 686 633322 - 633366 + r 71 -7.6 -4.08767 | opp_overlap 633306 633324, overlap 633323 TTGTGTCGTACGCAC AACGGCGCGGCGCGGGCTAG TCCGC CTGGCGCGTGCTGCGGCGCC TTTTACGGCGCTCGG Bphy_0559 634423 - 633404 - | high-affinity nickel-transporter Bphy_0560 634937 - 634452 - | cupin 2 domain-containing protein TERM 687 635133 - 635111 - R 100 -12.7 -5.27023 | ACCGCAAAAACAAAA GGCCCGTCC AAAAA GAACGGGCC TTCGCGACGAGCGAA Bphy_0561 637259 - 635154 - | translation elongation factor G TERM 688 637481 - 637455 - R 100 -17.3 -4.62336 | gap 1, opp_overlap 637452 637455 637476 AGCGGACGCGAAAAA GCCGGCGC-GCC TTGC GGCTGCGCCGGC TCGTGTTCCAGCCCC TERM 689 637455 - 637481 + r 89 -17.3 -2.73875 | gap 1, opp_overlap 637455, overlap 637452 637476 AGCGGACGCGAAAAA GCCGGCGC-GCC TTGC GGCTGCGCCGGC TCGTGTTCCAGCCCC Bphy_0562 638042 - 637527 - | hypothetical protein TERM 690 638128 - 638103 - H 100 -11.1 -5.61881 | opp_overlap 638103 CGTCAAAAACAAAAA GGCAGAGAGCC TTGC GGCCATCTGCC TTTCAACGCCGTAAG Bphy_0563 638164 - 638406 + | hypothetical protein TERM 691 638669 - 638706 + T 83 -8.3 -4.58213 | gap 1, opp_overlap 638670, overlap 638670 638679 TACGCGTCGCAGAGT ACGCGAT-CGAGCGCCGC GTG GCGGCGCTGGTGTGGCGC TTTTATACTTCGTTC TERM 692 638670 - 638705 + T 76 -11.8 -3.33843 | gap 1, opp_overlap 638670, overlap 638669 638679 ACGCGTCGCAGAGTA CGCGAT-CGAGCGCCGC GTG GCGGCGCTGGTGTGGCG CTTTTATACTTCGTT TERM 693 638679 - 638695 + T 81 -15.1 -2.64375 | opp_overlap 638670, overlap 638670 638669 AGAGTACGCGATCGA GCGCCGC GTG GCGGCGC TGGTGTGGCGCTTTT Bphy_0564 639384 - 638815 - | pseudouridine synthase TERM 694 638920 - 638889 - G 89 -5 -5.15969 | overlap 638891 GCCCAAGGGAAAAAA TATCGAGCGCGCCA ACGC CGACACGCACGAGA CGCAGCGTCGGAAAG TERM 695 638918 - 638891 - G 75 -7.6 -4.20888 | overlap 638889 CCAAGGGAAAAAATA TCGAGCGCGCCA ACGC CGACACGCACGA GACGCAGCGTCGGAA TERM 696 639739 - 639774 + G 73 -9.1 -3.92075 | gap 1, opp_overlap 639732 TCAGCACATCACGGT TCC-CGCTGACGGTGA CAAGA TCACTGTCAACGCGGA TTTCTCGCTCAACGT TERM 697 639921 - 639909 - g 79 -4.1 -4.89477 | GCGGCAAGAAGAAAA TCCAC TGG ATGGA AATCTTCGCGGGCGA Bphy_0565 639716 - 640972 + | isocitrate dehydrogenase, NADP-dependent TERM 698 641002 - 641038 + T 72 -4.4 -4.66833 | gap 1, opp_overlap 641007 641008, overlap 641008 GTCCTTGTATCGTGA CGAAACCCCCGGCGAGT GCGA ACCTGTCG-GGGTTTCA TTTTTGAGCTTCCCG TERM 699 641008 - 641033 + T 81 -8.9 -4.32649 | opp_overlap 641007 641008, overlap 641002 GTATCGTGACGAAAC CCCCGGCGAGT GCGA ACCTGTCGGGG TTTCATTTTTGAGCT TERM 700 642719 - 642735 + T 80 -10.8 -4.09685 | opp_overlap 642719 CCAGAAACGAAAAAA CCCGGC ATGAA GCCGGG TTTTCAAGGCTGCGG TERM 701 642735 - 642719 - T 100 -10.8 -5.42514 | opp_overlap 642719 CCAGAAACGAAAAAA CCCGGC ATGAA GCCGGG TTTTCAAGGCTGCGG Bphy_0567 642967 - 642761 - | cold-shock DNA-binding domain-containing protein TERM 702 643566 - 643556 - g 70 -2.4 -4.71426 | GCGGCAGGAACAAAA GCTG AAA CCGC CGGCCATGTTCAAGG Bphy_0568 643500 - 643814 + | ATP-dependent Clp protease adaptor protein ClpS TERM 703 644198 - 644220 + G 76 -2.7 -4.86731 | gap 1, overlap 644199 CTGCAACAGCAGGGC GTGACG-CGT CTCG ACGTCGTCAA TTTTATTTCGCACGG TERM 704 644837 - 644819 - g 89 -10.2 -4.58395 | opp_overlap 644801 644818 644819 644821 GGCATCTTCGAAAAA GACGCGGC GTT GTCGCGTC GTTTCCAGAAGATCG Bphy_0569 643811 - 646111 + | ATP-dependent Clp protease, ATP-binding subunit clpA TERM 705 646140 - 646165 + T 100 -16.2 -4.55798 | opp_overlap 646140 CGAAGCACGAACGAA CGGCGTGGGT GTCACA ACCCACGCCG TTTTGCTTTGCCATC TERM 706 646165 - 646140 - T 89 -16.2 -3.43151 | opp_overlap 646140 CGAAGCACGAACGAA CGGCGTGGGT GTCACA ACCCACGCCG TTTTGCTTTGCCATC TERM 707 646206 - 646188 - T 78 -8.8 -4.11216 | TTGCCATCCGTAAAA CGCCCG CAAGAAC CGGGCG ACGCCTTCAATGTTT Bphy_0570 646659 - 646213 - | deoxyuridine 5'-triphosphate nucleotidohydrolase Dut Bphy_0571 647728 - 646724 - | luciferase family protein Bphy_0572 649013 - 647802 - | phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase TERM 708 648440 - 648457 + g 79 -5.5 -4.62069 | gap 1 CTGCCGTTAGCAGCA CGC-GGCG GCC CGTCAGCG TTTTTGGCGTGAAGA Bphy_0573 649663 - 649163 - | lipoprotein signal peptidase Bphy_0574 652500 - 649663 - | isoleucyl-tRNA synthetase TERM 709 651296 - 651314 + g 72 -13.2 -3.09671 | AGCAGCGTGCCCGCT TCGTCGAG CGC CTCGACGA TCTTCGGGTTCGCGT TERM 710 651942 - 651960 + g 78 -3.7 -4.7329 | opp_overlap 651928 AGTTCACCGGCTTCA GGCCGCG GAACA CGTAGCC TTTTTCCATGATTTT Bphy_0575 653680 - 652688 - | riboflavin biosynthesis protein RibF TERM 711 654203 - 654160 - g 71 -13 -3.01712 | gap 1, opp_overlap 654181 654193 TTCCGGGCCTCAAGA CGCACCAGGCAG-CGCTCGAC GCG GGCGTGCGTCTGCACGGCGCG TCCGTGCATTTCGTC TERM 712 654193 - 654211 + G 74 -10.3 -3.72576 | opp_overlap 654160, overlap 654181 ACGCGGGCGTGCGTC TGCACGG CGCGT CCGTGCA TTTCGTCACGCCGAC TERM 713 654398 - 654417 + G 70 -5 -4.45544 | gap 1, overlap 654403 GCGCGTCACCGTGAC GCCGCCTGA GCC TCA-GTGGC TTTTCCTTGATACAA Bphy_0576 653799 - 654464 + | phosphoribosylglycinamide formyltransferase Bphy_0577 654461 - 655720 + | Fmu (Sun) domain-containing protein Bphy_0578 655807 - 657162 + | MscS mechanosensitive ion channel TERM 714 657210 - 657186 - f 74 -2 -5.00616 | gap 1, opp_overlap 657173 657204 TTGGCGGGCAAAAAA CGCCTGCTTCG ACCT CGATGG-GGCG TGTGCCCGGTTGATG Bphy_0579 657363 - 658565 + | fatty acid desaturase TERM 715 658600 - 658627 + F 100 -14.2 -4.58395 | opp_overlap 658606, overlap 658601 658606 AACTTTCGTTACGTC ACAAAACCCCGC GTTG GCGGGGTTTTGC TTTTTGGGCCGTCGG TERM 716 658601 - 658626 + F 93 -17.7 -3.34716 | opp_overlap 658606, overlap 658600 658606 ACTTTCGTTACGTCA CAAAACCCCGC GTTG GCGGGGTTTTG CTTTTTGGGCCGTCG TERM 717 658606 - 658621 + F 100 -11.8 -4.77757 | opp_overlap 658606, overlap 658601 658600 CGTTACGTCACAAAA CCCCGC GTTG GCGGGG TTTTGCTTTTTGGGC TERM 718 658621 - 658606 - f 93 -11.8 -4.4009 | opp_overlap 658606 658601 658600 CGTTACGTCACAAAA CCCCGC GTTG GCGGGG TTTTGCTTTTTGGGC TERM 719 659302 - 659290 - g 81 -4.7 -4.89852 | CTATATCCAGAAAAA GACGG GCG CCGAC ATGCTGCTGTGGCAA Bphy_0580 658697 - 659827 + | quinolinate synthetase complex, A subunit Bphy_0581 659827 - 660729 + | nicotinate-nucleotide pyrophosphorylase TERM 720 660757 - 660785 + T 100 -16.1 -4.8048 | opp_overlap 660757 GCGGTTCAAGGAAAA GGCCATCGACAGT CGC ACTGTCCATGGCC TTTTTCATATGCAGC TERM 721 660785 - 660757 - T 100 -16.1 -4.4078 | opp_overlap 660757 GCGGTTCAAGGAAAA GGCCATCGACAGT CGC ACTGTCCATGGCC TTTTTCATATGCAGC Bphy_0582 662408 - 660810 - | L-aspartate oxidase TERM 722 662432 - 662459 + r 93 -12.6 -4.4078 | opp_overlap 662429 TCCGTCGTAATACGC GGCTGGTGCGGC GAAC GCCGCTGCAGCC TTTTGATTGGGAAAC TERM 723 662630 - 662599 - R 100 -17.4 -4.07568 | opp_overlap 662606, overlap 662600 662606 CGGGGGTGCGCAAAA CCAAAAAGCCCCGC ACAA GCGGGGCTTTTTGT CGTCAACCGGCTGAA TERM 724 662629 - 662600 - R 100 -20.9 -3.04398 | opp_overlap 662606, overlap 662599 662606 GGGGGTGCGCAAAAC CAAAAAGCCCCGC ACAA GCGGGGCTTTTTG TCGTCAACCGGCTGA TERM 725 662623 - 662606 - R 100 -14.1 -5.0925 | opp_overlap 662606, overlap 662600 662599 GCGCAAAACCAAAAA GCCCCGC ACAA GCGGGGC TTTTTGTCGTCAACC TERM 726 662606 - 662623 + r 100 -14.1 -4.91109 | opp_overlap 662600 662599 662606 GCGCAAAACCAAAAA GCCCCGC ACAA GCGGGGC TTTTTGTCGTCAACC Bphy_0583 662820 - 662653 - | ribosomal protein L33 Bphy_0584 663064 - 662831 - | ribosomal protein L28 Bphy_0585 664051 - 663323 - | DNA repair protein RadC TERM 727 663530 - 663572 + g 75 -7.5 -4.25283 | opp_overlap 663530 663544 CGCGCGCCGCACAAT CTCGCGTGGATAGACGGCC ATCCG GGTCAGCGAGCCGCGCGAG TTTTCCTCCGAGCGT Bphy_0586 664241 - 664696 + | peptidylprolyl isomerase FKBP-type Bphy_0587 664699 - 665658 + | hydroxymethylbutenyl pyrophosphate reductase TERM 728 665682 - 665696 + F 100 -12.8 -5.7946 | opp_overlap 665682 CCCTATCAAAAAAAA CGCGCC GCC GGCGCG TTTTTTTATTGCCCC TERM 729 665696 - 665682 - f 100 -12.8 -5.86061 | opp_overlap 665682 CCCTATCAAAAAAAA CGCGCC GCC GGCGCG TTTTTTTATTGCCCC TERM 730 665821 - 665837 + F 70 -2.2 -4.72272 | gap 1, overlap 665822 TAATTTTGCCTCGAA C-GGGTG ATCG CGCCCTG TTTTTCGTACGACGA TERM 731 667041 - 667008 - g 75 -3.8 -4.64598 | gap 1, overlap 667009 GAATCAGGGCAAAAA TCCTTGGCGGCG-AC GGCGT GTGCACCGACAAGGT AGGGGAACTGGCGGG Bphy_0588 666197 - 667396 + | extracellular ligand-binding receptor TERM 732 667417 - 667442 + F 86 -9 -4.66163 | GGACGTACAGCCTGA CGGCACCG GACCATCCGA CGGTGCCG TTTTTGCATCCGCGT Bphy_0589 667624 - 668574 + | inner-membrane translocator Bphy_0590 668602 - 669771 + | inner-membrane translocator Bphy_0591 669794 - 670570 + | ABC transporter related Bphy_0592 670570 - 671286 + | ABC transporter related TERM 733 671338 - 671362 + T 100 -6.4 -5.80951 | overlap 671328 TCGCCTGCGAGCGAA GGCTGCATGT GTCGA GCATGTGGCC TTTTTTGTTTTGGGT Bphy_0593 671910 - 671449 - | GCN5-related N-acetyltransferase TERM 734 671555 - 671530 - G 70 -4.6 -4.37658 | overlap 671531 AAGCGCCTCATAAAA CCCGCGCACA TCGGCT TTCGCGCGGA GCACCTGAAGATTGA TERM 735 671767 - 671748 - G 81 -3.5 -4.99043 | opp_overlap 671748 CGGCGACAAAGAAAA GCTCAGG CTGCGT CGTGAGC TTGTTGGCAATGGAA Bphy_0594 673091 - 671907 - | acetylornithine and succinylornithine aminotransferase TERM 736 673200 - 673183 - g 100 -12.7 -5.24799 | opp_overlap 673183 CCAGAAATACAAAAA GCCACGG CATG CCGTGGC TTTCATGATTCGAAC TERM 737 673183 - 673200 + G 86 -12.7 -3.84246 | opp_overlap 673183 CCAGAAATACAAAAA GCCACGG CATG CCGTGGC TTTCATGATTCGAAC Bphy_0595 673139 - 673366 + | hypothetical protein Bphy_0596 674453 - 673422 - | oxidoreductase FAD/NAD(P)-binding subunit TERM 738 674215 - 674247 + g 80 -8.9 -4.3534 | opp_overlap 674228 674231, overlap 674217 AGGTCGGTGCACGCG GTCGCGCAGCACAGC AGC GCCATGCCGCGCGTC TTTTCGTCGTTCGAC TERM 739 674217 - 674245 + g 74 -10.1 -3.77927 | opp_overlap 674228 674231, overlap 674215 GTCGGTGCACGCGGT CGCGCAGCACAGC AGC GCCATGCCGCGCG TCTTTTCGTCGTTCG TERM 740 674615 - 674626 + G 79 -5.8 -4.66833 | opp_overlap 674614 674615 TGCGGCAACTACAAG GACG CGCG CGTC TTTTTGCGCTTACGA TERM 741 674813 - 674777 - g 81 -3.6 -5.00616 | gap 1 CGCCTCCGCAAAAAA GCGGTGATGCGGACACG CGCA CGCGTTCGC-TGATCGC CACCTTGACGGCGTC Bphy_0597 674491 - 675579 + | NAD-dependent epimerase/dehydratase Bphy_0598 675788 - 675600 - | hypothetical protein Bphy_0599 676658 - 675954 - | pseudouridine synthase TERM 742 676009 - 676042 + g 70 -13.9 -2.53263 | gap 1 CATTGCCACGCGCCC TCGGCGAGTTCG-GCT GGC AGCGCGAGCCCGCCGA TCCGTTCGCGGTGCA TERM 743 676738 - 676697 - R 100 -20.3 -4.2558 | opp_overlap 676691 676704 CACGCGGCATCAAAA CGTCGAAGGCGTTCTTCGA TAAC CCGAAGAACGCCTTCATCG CCTGCATTTTACCTG TERM 744 676704 - 676731 + r 88 -15.7 -3.1706 | opp_overlap 676697, overlap 676691 CATCAAAACGTCGAA GGCGTTCTTCG ATAACC CGAAGAACGCC TTCATCGCCTGCATT Bphy_0600 677900 - 676971 - | hypothetical protein Bphy_0601 678209 - 679609 + | amino acid permease-associated region TERM 745 679645 - 679671 + T 100 -14.5 -5.55855 | gap 1 GTTTGATGCAGTCGA GCCGGATCAGCC GTGA GGC-GATCCGGC TTTTGTTTTTTTCGG TERM 746 680112 - 680088 - T 100 -9.3 -5.31519 | gap 1, opp_overlap 680088 ATAGCCAAACAAAAA CCCCGCTCAG CGTCAT CTG-GCGGGG TTGCATGGCGAACCG TERM 747 680310 - 680299 - T 71 -7.2 -4.10161 | opp_overlap 680305 GATTATGGCCGAAAA CCCG CTCG CGGG CAAGCCAATGCCCTT Bphy_0602 681751 - 680339 - | oxygen-independent coproporphyrinogen III oxidase TERM 748 681385 - 681369 - G 81 -7.9 -4.52589 | overlap 681371 TCGTGCGACAGAAAA GTCGGTG TGC CACCGCC CCAATGCAACTGCGA Bphy_0603 682009 - 682305 + | hypothetical protein TERM 749 682407 - 682427 + G 72 -8.2 -4.13654 | opp_overlap 682359 TGCATGACCCCACCC GCCACGCC CGCAC GGCGTCGC TTTCTGATTTCCGCG Bphy_0604 682395 - 682988 + | hypothetical protein Bphy_0605 683062 - 683898 + | undecaprenol kinase TERM 750 683959 - 683934 - T 100 -15.4 -4.87626 | opp_overlap 683934 GCCCAATATGAAAAA GGCCCGCGGC AGGAAG ACCGCGGGCC TTTTTTGTCTCAGTT TERM 751 683934 - 683959 + T 100 -14.7 -5.38951 | opp_overlap 683934 GCCCAATATGAAAAA GGCCCGCGG CAGGAAGA CCGCGGGCC TTTTTTGTCTCAGTT Bphy_0606 684795 - 683989 - | tRNA (guanine-N(7)-)-methyltransferase TERM 752 684323 - 684291 - G 76 -2.5 -4.86731 | overlap 684293 684294 GGTCGGGAAAGAAAA TATGCACGCCGCCCA GGC TGTGCGGCGCAATCA TGTTTTCGAGCACTT TERM 753 684842 - 684854 + r 77 -2.6 -5.09762 | CACTGAATTGACAGG GCGT GAGGG GCGC TTTTCTTTGTTCGCG TERM 754 684933 - 684914 - R 100 -10.7 -5.26316 | GCACGCTACAAAAAA GCCGCCT TCAGGG AGGCGGC TCTCACGCTGGATTT Bphy_0607 685715 - 685152 - | protein of unknown function YGGT TERM 755 685756 - 685740 - R 95 -7.2 -5.40072 | overlap 685742 TTTCCTTCAAAAAAA CGCCCC GACGG GGGACG CACTGGCGCCGGCAG Bphy_0608 686172 - 685852 - | ethyl tert-butyl ether degradation EthD TERM 756 686910 - 686897 - H 86 -5.9 -5.16151 | TAAAGTGAATAAAAA CCGCC GATC GACGG GCCGTGGTCCCGAGC Bphy_0610 687534 - 687695 + | hypothetical protein Bphy_0611 687927 - 687673 - | hypothetical protein TERM 757 687745 - 687722 - G 74 -10.2 -3.72695 | gap 1, opp_overlap 687723, overlap 687723 ACCGTTTCCAGTAAA GCGCCCGGACC GCT GG-CCGGGCGT TTTTCGTTAACGGCC TERM 758 687723 - 687744 + g 100 -13.7 -4.8622 | gap 1, opp_overlap 687723 687722 CCGTTTCCAGTAAAG CGCCCGGACC GCT GG-CCGGGCG TTTTTCGTTAACGGC TERM 759 687744 - 687723 - G 73 -13.7 -2.83403 | gap 1, opp_overlap 687723, overlap 687722 CCGTTTCCAGTAAAG CGCCCGGACC GCT GG-CCGGGCG TTTTTCGTTAACGGC Bphy_0612 688090 - 688386 + | hypothetical protein TERM 760 688426 - 688471 + T 100 -27.2 -4.36914 | gap 1, opp_overlap 688432, overlap 688432 GCTGCGCGAGCCGGA CGAAAACGGCGCAATGTCGGC TCAAT GCCG-CATTGCGCCGTTTTCG TTTTGTCGACGCGAA TERM 761 688465 - 688432 - T 100 -19 -4.26076 | gap 1, opp_overlap 688426 688432 CGAGCCGGACGAAAA CGGCGCAATGTCGGC TCAAT GCCG-CATTGCGCCG TTTTCGTTTTGTCGA TERM 762 688432 - 688465 + T 100 -19 -4.73108 | gap 1, opp_overlap 688432, overlap 688426 CGAGCCGGACGAAAA CGGCGCAATGTCGGC TCAAT GCCG-CATTGCGCCG TTTTCGTTTTGTCGA Bphy_0613 689183 - 688503 - | lysine exporter protein LysE/YggA TERM 763 688851 - 688827 - G 72 -13.5 -3.14344 | opp_overlap 688826 688823 CACGCCGCGCAGGAA GCCGCGCTTCG GAT CGAGACGCGGC GTCGTTGCGTCGGCT Bphy_0614 690836 - 689259 - | UbiD family decarboxylase TERM 764 691216 - 691235 + H 78 -6.4 -4.62069 | CACATGTAGTCTTCG CCAGCG CACTTCGA CGCTGG TTTTTCGCGTGGGAG Bphy_0615 691442 - 692656 + | lytic transglycosylase catalytic TERM 765 692715 - 692688 - T 86 -8.4 -4.56597 | opp_overlap 692693, overlap 692693 CTGCCTCGGCAAAAA TGAAAGGGCACC TTAC GGTGCCCTTTTT AATGGTCGGCGCGGT TERM 766 692710 - 692693 - T 93 -12.7 -4.32046 | opp_overlap 692693, overlap 692688 TCGGCAAAAATGAAA GGGCACC TTAC GGTGCCC TTTTTAATGGTCGGC TERM 767 692693 - 692710 + T 100 -12.7 -4.77036 | opp_overlap 692693 692688 TCGGCAAAAATGAAA GGGCACC TTAC GGTGCCC TTTTTAATGGTCGGC Bphy_0616 693930 - 692737 - | aminotransferase class I and II TERM 768 693406 - 693418 + g 71 -9.1 -3.75153 | opp_overlap 693402, overlap 693393 693399 CGGCGAAGCGAGCAG CACGC CGC GCGTG TTTGCGTTCCACAGA TERM 769 694010 - 693984 - R 93 -11.4 -4.56978 | overlap 693985 CGCGCAAACAACAAA CGCGGGCCCGGC AAC GCGGGACCCGCC TGCATCGCCAGCAGC TERM 770 694009 - 693985 - R 87 -14.9 -3.33464 | overlap 693984 GCGCAAACAACAAAC GCGGGCCCGGC AAC GCGGGACCCGC CTGCATCGCCAGCAG Bphy_0617 694491 - 694054 - | NusB antitermination factor Bphy_0618 695006 - 694488 - | 6,7-dimethyl-8-ribityllumazine synthase TERM 771 694592 - 694608 + g 86 -10.8 -4.21194 | TTTCGACGGCAGTGC GGGCCG CGTCA CGGCCC TTTTCGGTCATGCGG TERM 772 694625 - 694641 + g 70 -5.8 -4.21194 | overlap 694617 TTTCGGTCATGCGGG CGACGG CCTGC TCGTCG TTTTCCGTGGTCAGC TERM 773 694761 - 694805 + g 84 -8.3 -4.56597 | opp_overlap 694741 694760, overlap 694763 CTCGCCGCGAATGAC CGCGCCGAGCGCGATCAGCGC GTC GAACTGGCCGCTTTCGGCGAG TTTTTGCAGCGCGAG Bphy_0619 696232 - 695096 - | 3,4-dihydroxy-2-butanone 4-phosphate synthase TERM 774 696123 - 696157 + g 71 -9.3 -3.71848 | gap 1, overlap 696124 GGCGTGATGAATTCC G-CTGCGATGACGAGG TCGC CCTCGTTCTCGCGGTC TTCTTCGTCGACAAG TERM 775 696124 - 696155 + g 78 -13 -3.44284 | overlap 696123 GCGTGATGAATTCCG CTGCGATGACGAGG TCGC CCTCGTTCTCGCGG TCTTCTTCGTCGACA Bphy_0620 696961 - 696347 - | riboflavin synthase, alpha subunit Bphy_0621 698107 - 696986 - | riboflavin biosynthesis protein RibD Bphy_0622 699427 - 698147 - | glutamate-1-semialdehyde-2,1-aminomutase TERM 776 698373 - 698426 + g 79 -14.8 -3.01712 | gap 3, opp_overlap 698368 698382, overlap 698379 698382 AGGCCGAACATGCCG CC-GACGGAATCCGC-CGTGAA-CGGA ATC TTCGCTTCGCGCGCGGCTTCCGTCAGG TCTTGCACGAGACGG TERM 777 699319 - 699299 - G 72 -8.2 -4.13767 | opp_overlap 699302, overlap 699302 CTCTGCATCCCAAAA GTACGCGC CCTGT GCGCGTTC GATGAAACGCGGCGT TERM 778 699344 - 699327 - G 71 -9.1 -3.72576 | gap 1 GCGCGTTCGATGAAA CG-CGGCG TGC CGCCGACG GAGCGGAAGGCGCGC Bphy_0623 700288 - 699638 - | hypothetical protein TERM 779 700416 - 700465 + H 87 -15 -3.36803 | gap 1, opp_overlap 700402 TCGGGGGCCGTATCC GCAGCGCTGCACGGACCGCCGGT CCAGC ATCGCCGTTCCTTGC-GCGCTGC TTCTCACTGGAATTC TERM 780 700503 - 700556 + G 73 -13.8 -2.80354 | gap 2, overlap 700505 700531 CACGACGTCAGATCC CGGCCCGACGCGCGGCTGATTCTGCT GCTC GGCGCGCTC-GCCGCGTG-CGGGCCG ATTTCGATCGATATG TERM 781 700531 - 700557 + G 84 -13.6 -3.6806 | overlap 700503 GGCTGATTCTGCTGC TCGGCGCGCTCG CCG CGTGCGGGCCGA TTTCGATCGATATGT Bphy_0624 700482 - 701690 + | Bcr/CflA subfamily drug resistance transporter Bphy_0625 703766 - 701847 - | glucokinase TERM 782 702881 - 702852 - G 80 -15.8 -2.87344 | CACGTTCTTCAGATA CGCTTCGAAGCG GCCTTT CGCCTCGAAGCG TTGACGGAACGATGA Bphy_0626 704451 - 703744 - | 6-phosphogluconolactonase Bphy_0627 706056 - 704599 - | glucose-6-phosphate 1-dehydrogenase TERM 783 705758 - 705723 - G 88 -15.4 -3.37198 | gap 1, opp_overlap 705750, overlap 705721 705724 TCGCCAGATAGAACA CGCGCG-TGCCGGGCAG GTC CCGCACGGCATCGCGCA ATTGCACGAAGTCTT TERM 784 705757 - 705724 - G 81 -16.7 -2.61997 | gap 1, opp_overlap 705750, overlap 705723 705721 CGCCAGATAGAACAC GCGCG-TGCCGGGCAG GTC CCGCACGGCATCGCGC AATTGCACGAAGTCT TERM 785 707425 - 707413 - g 75 -9.1 -3.97139 | GAACGCGAACAAGAA GTCCG GCT CGGAC TACATCTGCGCGGCC Bphy_0628 706586 - 707833 + | extracellular solute-binding protein TERM 786 708052 - 708015 - g 70 -4.8 -4.35926 | gap 2, overlap 708016 708017 708019 AGCGGAAACGCAAAA GGCA-CGGCG-TCCGCAG CACG CCGCGTATCGCCGATGGC GGCAATGGCCGACCG Bphy_0629 707985 - 708926 + | binding-protein-dependent transport systems inner membrane component Bphy_0630 708916 - 709773 + | binding-protein-dependent transport systems inner membrane component TERM 787 710590 - 710614 + G 84 -15.1 -3.33696 | TCTGTTCGTCGCTGG GTTCATCGGTG CAC CGCCGATGAAC TTCATTCAGGGGAAG Bphy_0631 709892 - 711007 + | ABC transporter related TERM 788 711035 - 711078 + T 86 -16.2 -2.79671 | gap 1, opp_overlap 711043, overlap 711043 GCTGTTGGGTTGGTT TCGAGAAAGCCCCGAG-GGAT AAG ATTCGCTCGGGGCTTTCTGGG CTTTGGGCTTCAGGT TERM 789 711070 - 711043 - T 87 -12.7 -3.85698 | opp_overlap 711035 711043 GTTGGTTTCGAGAAA GCCCCGAGGGA TAAGAT TCGCTCGGGGC TTTCTGGGCTTTGGG TERM 790 711043 - 711070 + T 91 -12.8 -3.95219 | gap 1, opp_overlap 711043, overlap 711035 GTTGGTTTCGAGAAA GCCCCGAG-GGAT AAG ATTCGCTCGGGGC TTTCTGGGCTTTGGG Bphy_0632 711819 - 711199 - | hypothetical protein Bphy_0633 712635 - 711835 - | Smr protein/MutS2 TERM 791 712684 - 712659 - R 100 -14.7 -5.10163 | gap 1 AAGCTGAAAACAAAA GGGCCGCCGGCA TCA CGCCG-CGGCCC CTACGAACATCGAAC TERM 792 712712 - 712734 + r 71 -11.2 -3.22475 | opp_overlap 712711 712710, overlap 712710 AACATCTCAACAAGC GCGGCAAGCG TGC TGCATGCCGC TATTCTACCGATCCG Bphy_0634 713814 - 712813 - | thioredoxin reductase TERM 793 713420 - 713386 - G 93 -4.8 -5.40072 | GTTCTTGTAAAAAAA GCCGTCGCAGGTCG CGCACGC CGACACGCCGCGGC CCATGAACAGTTCTT TERM 794 713512 - 713530 + g 86 -10.3 -4.2558 | overlap 713505 GTACTCGCCCGAATC GCCGATC AGGCG GATCGGC TTTTCGTCCAGCCTG Bphy_0635 714314 - 716581 + | cell division FtsK/SpoIIIE Bphy_0636 716618 - 717313 + | outer membrane lipoprotein carrier protein LolA TERM 795 717328 - 717358 + T 76 -13.3 -2.80816 | opp_overlap 717316, overlap 717332 AATGCCTGTCACGCC TGAAGGCCGGGCG ACGGA TGCGCGGCCTTCA TATCGTCGATAAACG Bphy_0637 718235 - 717321 - | LysR family transcriptional regulator Bphy_0638 718397 - 719389 + | agmatinase TERM 796 719453 - 719476 + F 100 -11 -5.38054 | opp_overlap 719442 719453 GAATCGTTTGGACAA CGCCCGCAAT GTCC GTTGTGGGCG TTTTTATTTCTCGCC TERM 797 720957 - 720941 - g 76 -5.8 -4.58663 | gap 1 ATCAGTCTGCAAAAA GGC-GCG TTGA CGCAGCC GCAAATCGACACACT Bphy_0639 719663 - 721291 + | TPR repeat-containing protein Bphy_0640 722627 - 721311 - | hydroxymethylpyrimidine transporter CytX TERM 798 722149 - 722127 - G 70 -2.6 -4.63527 | gap 1, overlap 722139 722142 CCACGAGCGCAAAAA GCGCCGCAC GAACGA GAGCGG-GC CGCTGATCGCGAGCA TERM 799 722487 - 722462 - G 71 -10.4 -3.64703 | gap 1, overlap 722463 722478 722479 CGTGCGGCAGCGAAA GGCCGGGCACG AGCAA CGCGCCCG-CC TGCGCGACCAGCAGG TERM 800 722559 - 722533 - G 80 -12.2 -3.75193 | opp_overlap 722525, overlap 722525 AACCATAGAGCGAAA GCGTCGCCCGTT TTG AACGCGCGGCGC CCATCCGGCACCGGC TERM 801 722845 - 722884 + H 72 -8.5 -3.85698 | gap 1 CCGTTCCGGGGCAGG CCGTCGCG-CGCAAGGCG GTGCA CGCTATGCATCGTGACGG TTTATACCCGAAAAG TERM 802 724189 - 724162 - g 72 -13.4 -3.05844 | overlap 724172 724173 GGCTCGAGGGCAAGA TCGGCGAGAAGC TCGC GCGCCTCGCCGA CCTGGATGCGCAATG Bphy_0641 722871 - 724232 + | ATPase central domain-containing protein TERM 803 724252 - 724228 - f 75 -5.6 -4.68705 | overlap 724230 AGAACGGCAAGAAAA GCTGACGCGC TCGTC GCGCCTCACC CGACAATGCCGCCGG Bphy_0642 724326 - 725624 + | seryl-tRNA synthetase TERM 804 725869 - 725910 + F 100 -23.3 -3.64912 | opp_overlap 725875 725881, overlap 725871 725875 725881 ACCCTTTCCGCCAGA TGCAAACGAAAACAGGCCC TTCG GGGCCTGTTTTCGTTTGTG TTGTCTATATCCATG TERM 805 725871 - 725908 + F 100 -25.9 -3.39896 | opp_overlap 725875 725881, overlap 725869 725875 725881 CCTTTCCGCCAGATG CAAACGAAAACAGGCCC TTCG GGGCCTGTTTTCGTTTG TGTTGTCTATATCCA TERM 806 725904 - 725875 - f 100 -20.9 -3.70902 | opp_overlap 725871 725869 725875 725881, overlap 725881 TCCGCCAGATGCAAA CGAAAACAGGCCC TTCG GGGCCTGTTTTCG TTTGTGTTGTCTATA TERM 807 725875 - 725904 + F 100 -20.9 -4.3277 | opp_overlap 725875 725881, overlap 725871 725869 725881 TCCGCCAGATGCAAA CGAAAACAGGCCC TTCG GGGCCTGTTTTCG TTTGTGTTGTCTATA TERM 808 725881 - 725898 + F 100 -12.7 -4.67563 | opp_overlap 725875 725881, overlap 725875 725871 725869 AGATGCAAACGAAAA CAGGCCC TTCG GGGCCTG TTTTCGTTTGTGTTG TERM 809 725898 - 725881 - f 100 -12.7 -4.57516 | opp_overlap 725881 725875 725871 725869, overlap 725875 AGATGCAAACGAAAA CAGGCCC TTCG GGGCCTG TTTTCGTTTGTGTTG Bphy_0643 726158 - 726388 + | hypothetical protein TERM 810 726725 - 726735 + F 89 -4 -5.60993 | ATGCGCGGTCACTAC TGAA AGG TTCA TTTTTTTCTGGCGCA TERM 811 726855 - 726825 - g 70 -11.1 -3.32844 | opp_overlap 726828 TGCGTCATGGCAGAA GCTCCGCGC-GCCCG GTT CGGGCAGC-CGGCGC CCTGGTCAGTTGCTA TERM 812 727982 - 728001 + G 91 -11.4 -4.56597 | GAGCGAGTGCGGATC GCGCGATC GCGT GGTCGCGC TTTTTGCGCAACCCG Bphy_0644 726816 - 728279 + | PAS/PAC sensor signal transduction histidine kinase TERM 813 728259 - 728294 + F 74 -13.3 -2.65264 | gap 1, opp_overlap 728247 GCAGGCAGCGCGTGC GCTGCGCAGGCGGCGT CATGA AC-CCGTCTGCGCCGC TCGTCTACGTCGTCG Bphy_0645 728276 - 728998 + | two component LuxR family transcriptional regulator TERM 814 729104 - 729076 - g 71 -3.9 -4.55697 | gap 1, overlap 729077 729080 ATGGGCACAAACAAA CCATTCGTCGTC GTGGTG GACGACG-ATGC GTCGGTGGGCAGGGC Bphy_0646 729061 - 729447 + | response regulator receiver protein Bphy_0647 729678 - 730955 + | RND family efflux transporter MFP subunit Bphy_0648 731005 - 734274 + | hydrophobe/amphiphile efflux-1 (HAE1) family protein Bphy_0649 734276 - 735766 + | RND efflux system outer membrane lipoprotein Bphy_0650 735763 - 737112 + | PqiA family integral membrane protein Bphy_0651 737109 - 738713 + | hypothetical protein Bphy_0652 738710 - 739300 + | hypothetical protein Bphy_0653 739727 - 740512 + | methionine aminopeptidase, type I TERM 815 740585 - 740602 + F 86 -9.1 -4.60041 | TGCGGCGCCCCTTTC CGGCACG TGCG TGTGCCG TTTTTGCGCGTGCCT TERM 816 741086 - 741066 - g 75 -14 -3.02043 | AACTGCTCGTCAACA CGGCGAGC GACTG GCTCGCCG CAGCGGGCGCCACCG Bphy_0654 740735 - 741277 + | GCN5-related N-acetyltransferase TERM 817 741306 - 741323 + F 75 -8.4 -4.08216 | TCGTTGCGGCGTCTC GCGGCT CCTGCT AGCCGC TTTTGGACACGCTAC TERM 818 741352 - 741390 + F 78 -3.7 -4.9792 | gap 1 ACTTTTCCCGCTCTT TGCCGATTGCTCCGCCCA GGAC TCGGCGC-GCACGCGGCA TTTTTCTGTCGCGTG TERM 819 741855 - 741836 - g 91 -16.4 -3.62522 | overlap 741824 GAAGCGGGCGAAGAA GCGCCCGG CAAG CCGGGCGC CGTGGCGCCGAAGCC Bphy_0655 741479 - 742327 + | septum site-determining protein MinC TERM 820 742990 - 742945 - g 77 -13.3 -3.40371 | gap 1, opp_overlap 742942 GATCCCATCAAGGAA CACCTGCTGATCACGCGCTACA ACC CGAAGCGCGTGAGC-GAAGGTG AGATGCTGTCGCTGA Bphy_0656 742417 - 743232 + | septum site-determining protein MinD Bphy_0657 743248 - 743502 + | cell division topological specificity factor MinE Bphy_0658 743764 - 744075 + | hypothetical protein Bphy_0659 744198 - 744311 + | hypothetical protein TERM 821 744325 - 744352 + T 100 -14.8 -5.44119 | GACGATTGTGGGAGG TCGGGCGCGTGC AGCC GAGCGCGCCCGA TTTTTTTGCAATCGG Bphy_0660 745838 - 744381 - | chloride channel core TERM 822 745201 - 745229 + g 84 -13.2 -3.73068 | gap 1 GTGATCAGCACACCG CTCGCGCGC-GCT TCGA AGCTGCGCGTGAG TTCTTCGATTGCGAA TERM 823 745587 - 745558 - G 73 -5.5 -4.41348 | overlap 745581 GCGCCGCGAAAGAAA CGCCGCGTGAGCC AGAC GGACAATGCGGCG ACGCCGGGCGTCAAC Bphy_0661 746046 - 747056 + | lipopolysaccharide heptosyltransferase I TERM 824 747123 - 747091 - T 84 -2.6 -5.37593 | overlap 747096 747098 TTTGAAAGGAAAAAA GAAAAGAGGCGTAC GCGCA GTTCGCCCAATTTC GGACGCCGTCGCGAG TERM 825 747145 - 747096 - T 85 -3.4 -5.47846 | overlap 747091 747098 AAGGAAAAAAGAAAA GAGGCGT-ACGCGCAGTTCGCCCA ATTT CGGACGC-CGTCGCGAGACGCCTC TGAAAAGCCCGCGCC TERM 826 747174 - 747152 - T 78 -9.8 -4.08394 | AGACGCCTCTGAAAA GCCCGCGC CTGAAGC GCGCGGAC CGAGAGGAAACCTGC Bphy_0662 748056 - 747877 - | hypothetical protein TERM 827 748275 - 748223 - R 100 -27.1 -2.56596 | gap 1, overlap 748227 CTTTCGACTAACTCA GCAAGCG-AAGCGGCCCCGGCGTG GTGCAT CGCGCCGGGGCCGCTTGCGCTGGC TCGTGAGCCGGGATT TERM 828 748271 - 748227 - R 100 -25.1 -3.22884 | gap 1, overlap 748223 CGACTAACTCAGCAA GCG-AAGCGGCCCCGGCGTG GTGCAT CGCGCCGGGGCCGCTTGCGC TGGCTCGTGAGCCGG Bphy_0663 749596 - 748289 - | general substrate transporter Bphy_0664 750631 - 750119 - | TonB protein Bphy_0665 752151 - 750937 - | oxygen-independent coproporphyrinogen III oxidase TERM 829 751522 - 751541 + g 74 -10 -3.7108 | gap 1 GAGCGACAGATGCGG CGGCGC-GT ACG ACAGCGCCG TTTCGATATCCGCCT Bphy_0666 752771 - 752148 - | RdgB/HAM1 family non-canonical purine NTP pyrophosphatase TERM 830 752195 - 752211 + g 71 -10.1 -3.61398 | GCTGCAGCGCAAGTG CGCGATG ACT CGTCGCG TTCTTCACGGCAGGC Bphy_0667 753504 - 752764 - | ribonuclease PH TERM 831 753370 - 753343 - G 73 -9.1 -3.85698 | gap 1 GCGGTCGCGCAGAAA GGCGGGCA-CGC TCTCG GCGATGCTCGCC GTGCAGATCACCTTG Bphy_0668 753770 - 754729 + | hypothetical protein Bphy_0669 754746 - 755432 + | guanylate kinase Bphy_0670 755495 - 755698 + | DNA-directed RNA polymerase, omega subunit TERM 832 756419 - 756403 - g 76 -9.3 -4.07568 | overlap 756404 GGTGCCGCCCGAAAA GCGCCGC CGC GTGGCGC GCGAAACGCTGGACA TERM 833 756555 - 756542 - g 74 -5.2 -4.58395 | GCGACGCTCGAAAAA GCCG TGAAGG CGGC GCGCGGCAACCGTCG Bphy_0671 755774 - 758158 + | (p)ppGpp synthetase I, SpoT/RelA TERM 834 758373 - 758389 + G 72 -8.7 -4.1585 | overlap 758386 GGGAATGATCGCGGA CGTCCGT GGG ATGGACG TTTTACGCCTTCTAC Bphy_0672 758244 - 758732 + | hypothetical protein TERM 835 758783 - 758804 + F 89 -15.9 -3.18264 | opp_overlap 758783 GCTAGAAAAGACAAA GGGCCTTCC GGTT GGAAGGCCC TTCATGAGTGGCGCG TERM 836 758804 - 758783 - f 100 -15.9 -4.51238 | opp_overlap 758783 GCTAGAAAAGACAAA GGGCCTTCC GGTT GGAAGGCCC TTCATGAGTGGCGCG TERM 837 758971 - 758950 - f 100 -15.9 -4.05788 | CCCGGTGAAACGAAA GGGCCTTCC TGGA GGAAGGCCC TCGAAAAAATGGCGC Bphy_0673 759177 - 759749 + | transcription elongation factor GreB TERM 838 759836 - 759805 - T 100 -19.6 -3.86524 | opp_overlap 759812, overlap 759806 759812 ACATGTCGGCACAAA CGAAAAAGGCGCCG CAAA CGGCGCCTTTTTCA TGCTGCGAGTACTGC TERM 839 759835 - 759806 - T 100 -20.9 -2.91593 | opp_overlap 759812, overlap 759805 759812 CATGTCGGCACAAAC GAAAAAGGCGCCG CAAA CGGCGCCTTTTTC ATGCTGCGAGTACTG TERM 840 759829 - 759812 - T 100 -14.1 -5.04601 | opp_overlap 759812, overlap 759806 759805 GGCACAAACGAAAAA GGCGCCG CAAA CGGCGCC TTTTTCATGCTGCGA TERM 841 759812 - 759829 + T 100 -14.1 -4.77036 | opp_overlap 759812 759806 759805 GGCACAAACGAAAAA GGCGCCG CAAA CGGCGCC TTTTTCATGCTGCGA Bphy_0674 761003 - 759858 - | porin TERM 842 760433 - 760449 + g 79 -11.5 -3.90744 | AGCTGTACGACGCGC CCGCGCT ATA GGCGCGG TTGTTTGCGAAGCCG TERM 843 761420 - 761439 + r 76 -5 -4.8622 | overlap 761421 ACGCTATACTTGAAT CTCTGCTT TTCG AAGCAGAC TTTTTCGTTGACGAA TERM 844 761477 - 761499 + r 100 -11.3 -5.86061 | TCCAAACCTTTGTCG GCGCGACTT CGCAA GAGTCGCGC TTTTTTTTCGTCCGC Bphy_0675 761769 - 761527 - | hypothetical protein Bphy_0676 762175 - 762378 + | cold-shock DNA-binding domain-containing protein TERM 845 762408 - 762424 + F 100 -11.5 -5.4833 | opp_overlap 762408 GGCTCCCAGGATAAA CCCTCGC ATT GCGGGGG TTTTTTATTGGCTGC TERM 846 762424 - 762408 - f 78 -9.3 -3.96148 | opp_overlap 762408 GGCTCCCAGGATAAA CCCTCGC ATT GCGGGGG TTTTTTATTGGCTGC TERM 847 763631 - 763654 + G 75 -10.3 -3.86202 | gap 1 GCGTTCGAGGAGCGG GACGCG-GCG GAAGG CGCGCGCGTC TTTCATATCGTCGAC Bphy_0677 762698 - 763876 + | DNA polymerase III, epsilon subunit Bphy_0678 764496 - 763873 - | chorismate mutase Bphy_0679 764948 - 764799 - | hypothetical protein Bphy_0680 765211 - 765549 + | hypothetical protein Bphy_0682 767175 - 766231 - | LysR family transcriptional regulator TERM 848 768063 - 768033 - g 70 -7.5 -3.94877 | gap 1 AGTGCTGAACAACAA GCTGTTTGCC-GCG TTCG CGCAGGCAATCGGC GCGCCGCATCTGACG Bphy_0683 767269 - 768519 + | Formyl-CoA transferase Bphy_0684 768512 - 769651 + | acyl-CoA dehydrogenase domain-containing protein TERM 849 769706 - 769748 + T 89 -15.8 -3.44051 | opp_overlap 769717, overlap 769707 769717 ATCGATCCGTGAGCA GAAAACAAAAAGCCCAGTCG CGA TGACTGGGCTTTTTGTTTGA TTCTGCTGGTGCCGG TERM 850 769707 - 769747 + T 95 -19.3 -2.66216 | opp_overlap 769717, overlap 769706 769717 TCGATCCGTGAGCAG AAAACAAAAAGCCCAGTCG CGA TGACTGGGCTTTTTGTTTG ATTCTGCTGGTGCCG TERM 851 769717 - 769737 + T 100 -13.3 -5.39681 | opp_overlap 769717, overlap 769707 769706 AGCAGAAAACAAAAA GCCCAGTCG CGA TGACTGGGC TTTTTGTTTGATTCT TERM 852 769737 - 769717 - T 100 -12.6 -5.56263 | opp_overlap 769707 769706 769717 AGCAGAAAACAAAAA GCCCAGTC GCGAT GACTGGGC TTTTTGTTTGATTCT TERM 853 769926 - 769957 + T 78 -3.7 -5.00616 | gap 1, overlap 769929 CTCAACTTTTCTTTT CG-AGATGATAGCG GGTCA CGCGATCAACTTCG TTTTTTGAGCCGAGG Bphy_0685 770928 - 769912 - | inositol phosphatase/fructose-16-bisphosphatase TERM 854 770704 - 770722 + g 73 -9.6 -3.82191 | TTCGAGCAGGATTTC GTTCGACA GGA TGTCGAGC TTCTTCTGCACTTCG TERM 855 771202 - 771185 - R 100 -12.7 -5.95539 | opp_overlap 771197 TCGCAAATAAAAAAA GCCGGCA CATG TGCCGGC TTCCGACTTCGCTGG TERM 856 771240 - 771223 - R 70 -4 -4.56775 | ACTTCGCTGGAAAAA CGCAGG ATCAGG CCAGCG CCTTCTCGACGATTT Bphy_0686 774013 - 771230 - | aminopeptidase N TERM 857 771496 - 771506 + g 70 -2.4 -4.66833 | AGATCAGCGAGCGCG CGCG ATT CGGG TTTTTCAGATTGAAC Bphy_0687 774129 - 774830 + | putative transmembrane lipoprotein TERM 858 774890 - 774863 - T 100 -19.2 -5.44119 | opp_overlap 774863 774883 TCGAGGGCAAAAAAA CGGCCACATCGC GTGA GCGATGCGGCCG TTGCTATTGGCTGCC TERM 859 774863 - 774890 + T 90 -17 -3.38072 | opp_overlap 774863, overlap 774883 TCGAGGGCAAAAAAA CGGCCACATCGC GTGA GCGATGCGGCCG TTGCTATTGGCTGCC Bphy_0688 775509 - 774937 - | hypothetical protein TERM 860 775138 - 775148 + g 75 -6.8 -4.39002 | GGCGAGGGCAACAGT CGCA ATT TGCG TTTTGTCGCCCATTT TERM 861 775924 - 775890 - H 76 -13.5 -2.78384 | gap 1 GTCGGGCCGATTAGA CGCG-CCGTGGCCGTG CGGG CTCGGCCACGCTCGCG CCCCGGGTGGCGAGA Bphy_0689 776264 - 776968 + | hypothetical protein TERM 862 777301 - 777317 + G 80 -5.1 -4.83615 | GCGTCGTGAAGAGCG CGCATTG GGG CAATCCG TTTTTCTGGGGCGTC Bphy_0690 776952 - 777746 + | phospholipid/glycerol acyltransferase TERM 863 777824 - 777848 + G 72 -12.9 -3.05463 | opp_overlap 777786 ACGACGCGCCGCTCT TCGATACCGAC GGC GTCGGTCTCGA TTCGATCGACGCACT Bphy_0691 777727 - 778026 + | putative acyl-carrier protein Bphy_0692 778023 - 778280 + | phosphopantetheine-binding TERM 864 778814 - 778828 + G 70 -2.7 -4.60797 | TGGTGCGTGTTCTTT CTCGC GAATG GCGTG TTTTCTCTCTACACC Bphy_0693 778280 - 778984 + | hypothetical protein TERM 865 779683 - 779699 + G 91 -9.3 -4.72007 | overlap 779664 GGCTTCGCGGCGCTC GCGCCCG TGC CGCGCGC TTTCTTTTCGTCGGG TERM 866 779848 - 779826 - g 77 -12.7 -3.32844 | overlap 779831 GTGGCGACGTCAGAA CGAGACGCC GGCGT GGCGTCCCG TCAGCGGCGTCGACG Bphy_0694 778981 - 780669 + | AMP-dependent synthetase and ligase TERM 867 781669 - 781640 - g 100 -22.1 -3.04144 | CGCGCATCTCGAACA GGCCGCGGCGGGC GAGC GCACGCCGCGGCC CGGCTGGCGCTCCGC Bphy_0695 780666 - 782447 + | glycosyl transferase family protein TERM 868 783872 - 783930 + G 76 -13.8 -3.14132 | gap 3, opp_overlap 783871 783872 783875 TGCGCCTCAACGAAG CGACGCCCGTGCC-CG-CGCCGTTGCGCG CATT CGCG-GACGGCGTCGCGGCGCTGTCGCCG TTCGTCGACGAAGAC Bphy_0696 782434 - 784029 + | histidine ammonia-lyase Bphy_0697 784022 - 784453 + | thioesterase superfamily protein Bphy_0698 784441 - 785109 + | putative signal peptide protein Bphy_0699 785106 - 787526 + | RND superfamily drug exporter TERM 869 787961 - 787926 - g 71 -9.7 -3.7108 | gap 2, overlap 787912 787927 ACCGGCAGATGGAAA TCGGCACGGCCGCGCCG TTCG CGGC-C-GCCGCGCTGA ATGTGCAGGGGCCGG Bphy_0700 787523 - 788704 + | Beta-ketoacyl synthase TERM 870 789058 - 789030 - g 70 -13.8 -2.61383 | gap 1, overlap 789029 ACGCGCAGCTACAAG GCGCACGCGAGCG CATT CGCGCGCG-GCGC GCATCTGACCGTCAA Bphy_0701 788739 - 789221 + | Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ Bphy_0702 789218 - 789943 + | 3-oxoacyl-(acyl-carrier-protein) reductase Bphy_0703 789943 - 791169 + | Beta-ketoacyl synthase TERM 871 791588 - 791563 - g 70 -5.3 -4.36914 | gap 1, overlap 791545 791565 GCGGTGTCGAGAAAA CGCC-GCCGTAC ACG GTGCCGCAGGCG ATGAGCAGCACCGCC Bphy_0704 791166 - 792392 + | Beta-ketoacyl synthase Bphy_0705 792436 - 792864 + | putative signal peptide protein Bphy_0706 792892 - 793323 + | putative excinuclease, ATPase subunit TERM 872 793367 - 793339 - T 88 -13.8 -3.71649 | gap 1, opp_overlap 793337 CGCGGAAAGCCCAAA GGCGGC-GGCGCG TATG CGCGCATGCCGCC CGTCGTGTCAGTCTG Bphy_0707 794127 - 793375 - | methyltransferase type 11 TERM 873 794344 - 794385 + G 72 -8.5 -4.19817 | overlap 794353 CTGCTGCGCAAGGCG GGACGGTCGGTGCTGGTGC TCGA GCGCCAGCACTTTCCGCGC TTTTCGATCGGTGAG TERM 874 794353 - 794376 + G 87 -14.6 -3.60818 | overlap 794344 AAGGCGGGACGGTCG GTGCTGGTGC TCGA GCGCCAGCAC TTTCCGCGCTTTTCG Bphy_0708 794248 - 795498 + | monooxygenase FAD-binding TERM 875 795520 - 795533 + T 84 -3.7 -5.28983 | overlap 795519 795506 GGGTGTTTTTGTCTG CGACG CAAT CGCCG TTTTTGTCTTTTCGC Bphy_0709 796969 - 795644 - | guanine deaminase TERM 876 796648 - 796622 - G 78 -4.3 -4.72272 | gap 1, opp_overlap 796622 796643 CTCGTCGATGAAAAA GCGCGCCGTGTC CTCT GCGACGGCG-GC TTCGCTGAAACCGCG Bphy_0710 798039 - 796999 - | adenosine deaminase Bphy_0711 799154 - 798144 - | xanthine dehydrogenase accessory protein XdhC TERM 877 799211 - 799238 + r 74 -13.4 -2.6252 | gap 1, overlap 799189 799206 GCCGGTTGATCGTGT GG-GCGGCGCGGT CGT GTCGCGCCGCACC TGGGTTGTGCTATGC Bphy_0712 801704 - 799248 - | xanthine dehydrogenase, molybdopterin binding subunit TERM 878 799494 - 799482 - G 74 -10.5 -3.73936 | opp_overlap 799481 799485 AAACGGCAGCAATAA CGGCG GCT CGCCG ACGGCTTTCGAGCGG TERM 879 799485 - 799527 + g 78 -7.5 -4.42238 | opp_overlap 799482, overlap 799481 CGGCAGCAATAACGG CGGCTCGCCGACGGCTTTC GAGCG GAACACCGTCGGCTCGGCG TTTTCATTGCGATAC TERM 880 800765 - 800730 - G 71 -7.5 -4.07885 | CAGGTCCGCCGAAAA CCCCGCGCGCAGCG-CG ATCT CGACAC-GCGCGCCGAG AATGCGGCCGGCGTC TERM 881 800772 - 800792 + g 71 -12.5 -3.23395 | opp_overlap 800769 800768 CGCGCCGAGAATGCG GCCGGCGTC GTC GAAGCCGGC TTCGTACTCGTAGAT Bphy_0713 803242 - 801704 - | xanthine dehydrogenase, small subunit Bphy_0714 804158 - 803652 - | disulphide bond formation protein DsbB TERM 882 803738 - 803702 - G 87 -7.9 -4.84359 | TCAGCGCGACAAAAA TCACCGCGAAGCCGATC AGT GACCAGCCCGGCAGCGA AATGCCGAGAATCGG Bphy_0715 805652 - 804264 - | amidase TERM 883 806681 - 806699 + G 70 -11.6 -3.33009 | opp_overlap 806675 806673, overlap 806695 806696 CATCGAACACCTGAT CGCGCCGC TGC GCGACGCG TTCTCCGCGATTTTC TERM 884 806695 - 806709 + G 70 -2.7 -4.71426 | opp_overlap 806675 806673, overlap 806681 806696 TCGCGCCGCTGCGCG ACGCG TTCTC CGCGA TTTTCTTCGTGACGA Bphy_0716 805878 - 807635 + | sodium/hydrogen exchanger TERM 885 807831 - 807815 - g 84 -15.1 -3.34947 | opp_overlap 807810 GAACAATTCCGATAA CGCCGGG GCT CCCGGCG ATCCATCTCCTTCCA TERM 886 808246 - 808302 + G 71 -13.6 -2.72511 | opp_overlap 808204 808263, overlap 808245 AGCCGGATGGCACGC TCGGCGTAGCGGCGAAAGCC-GGTGGCG CTC CGCCCCCCGGC-TTCGGCTCGGCGCCGG ATTTCGGCGCATCGA Bphy_0717 807792 - 809231 + | peptidase C26 TERM 887 809246 - 809289 + F 88 -15.3 -3.54543 | overlap 809247 ATCTCGCTAACTTCT CGCCGAACGCGAGCGGG GCCGGCAACG CCCGCTCGCGTTCTGCA TTTCAGCGCATCCGT TERM 888 809247 - 809288 + F 100 -18.8 -2.72511 | overlap 809246 TCTCGCTAACTTCTC GCCGAACGCGAGCGGG GCCGGCAACG CCCGCTCGCGTTCTGC ATTTCAGCGCATCCG TERM 889 809825 - 809837 + G 81 -3.3 -5.00616 | GTACAACGGCGGTTA TGGCG CGT CGCTG TTTTTTCACGCGCCG Bphy_0718 809508 - 810251 + | putative exported lipoprotein TERM 890 810328 - 810294 - T 100 -18.6 -3.91716 | opp_overlap 810296, overlap 810296 CGACGGCGCAAAGAA TAGGGCTGAGTCCGCG ATT CGTGGACTCAGCCCTT TGTGCCTTCAGGCAG TERM 891 810326 - 810296 - T 100 -21.2 -3.54755 | opp_overlap 810296, overlap 810294 ACGGCGCAAAGAATA GGGCTGAGTCCGCG ATT CGTGGACTCAGCCC TTTGTGCCTTCAGGC TERM 892 810296 - 810326 + T 100 -23.4 -3.97368 | opp_overlap 810296 810294 ACGGCGCAAAGAATA GGGCTGAGTCCGCG ATT CGTGGACTCAGCCC TTTGTGCCTTCAGGC Bphy_0719 811460 - 810381 - | hypothetical protein Bphy_0720 812185 - 811619 - | GCN5-related N-acetyltransferase TERM 893 811995 - 811974 - G 73 -13.7 -2.83715 | gap 1 GCGATCAGCACGATA CGGCGCTCGG CCC CCG-GCGCCG ACAACCGCGCGCGCC Bphy_0721 812590 - 813891 + | general substrate transporter TERM 894 813957 - 813938 - T 84 -15 -2.96274 | opp_overlap 813938, overlap 813933 CGCTGTAGAACCAGA CCCCCGCA CGTG TGCGGGGG TTTTCATTTCATCGG TERM 895 813938 - 813957 + T 100 -15 -4.58773 | opp_overlap 813938 813933 CGCTGTAGAACCAGA CCCCCGCA CGTG TGCGGGGG TTTTCATTTCATCGG Bphy_0722 815849 - 814002 - | TPR repeat-containing protein TERM 896 814461 - 814502 + g 78 -15.7 -2.72344 | gap 1 CTTGCGCTTCGCGTG CCCGCCGAG-CGAGCCGCGC CAC GTGCGGCGGGACGCGGCGGG TGCTTGCAGATAAGG TERM 897 814807 - 814842 + g 100 -19.6 -4.07687 | GGCTCGCCGTTCCAG CGCGGCAGCGCCGTCG CGTC CGGCGCCGCGGCCGCG TTTTCCAGCCGCCAT TERM 898 814990 - 814966 - G 91 -17.1 -3.53343 | overlap 814967 AATGCCTGGTCGAAA GCGCGCACGGC AGC GTCGTGCGCGC CGAGCGCGTGATGCG TERM 899 814998 - 814967 - G 75 -15.1 -2.71791 | gap 1, overlap 814966 ATGCCTGGTCGAAAG CGCGCACGGCAGCG TCGTG CGC-GCCGAGCGCG TGATGCGCGGCGCCG TERM 900 815075 - 815054 - G 70 -10.9 -3.39449 | gap 1, opp_overlap 815056, overlap 815050 815069 CCGGATCAAGACCAA CGGC-GCGTT CGA AACGCGGCCG CGCTTCTGCATGACG TERM 901 815267 - 815227 - G 87 -15.3 -3.57144 | opp_overlap 815221 TTGGCGAGGTTGAAA CGCGCGGCGACGAAGCGCG GCT CAATCTTCAGCGCCGCGCG GAAATGGGCGCCTGC Bphy_0723 815960 - 816340 + | ArsR family transcriptional regulator Bphy_0724 816337 - 817458 + | cation diffusion facilitator family transporter Bphy_0725 817568 - 819283 + | monooxygenase FAD-binding TERM 902 819329 - 819302 - T 100 -17.8 -6.22802 | opp_overlap 819308 GGCCATAAAAAAAAA GCGTCCGCATCG TTGC CGATGCGAACGC CAAGGTGCTGTTGCG Bphy_0726 819612 - 819358 - | NAD-dependent formate dehydrogenase, delta subunit TERM 903 819594 - 819568 - G 70 -2.3 -4.62783 | CATCGACTCGAAAAA GTCGCCGAT-GCG GTT CGCCAT-GTCGAC CAGGTTATGTGCGTC Bphy_0727 822573 - 819634 - | formate dehydrogenase, alpha subunit TERM 904 820916 - 820967 + g 74 -10.1 -3.70149 | gap 2, opp_overlap 820896 GCGTTGCCGCCCGTC GCGT-ACAGGCGCG-CGGCTTCGCG CACC TGCTGAGCCGGCACGCCCGTCACGC TTTCCATCATCTCCG Bphy_0728 824144 - 822588 - | NADH dehydrogenase (quinone) Bphy_0729 824653 - 824141 - | NAD-dependent formate dehydrogenase, gamma subunit TERM 905 825389 - 825403 + G 74 -2.7 -4.82901 | TCGTACATCTGACGC GCCGC AAGCA GGGGC TTTTTCTGGCGAAGG Bphy_0730 824788 - 825870 + | molybdate metabolism transcriptional regulator Bphy_0731 826014 - 826280 + | hypothetical protein TERM 906 826322 - 826287 - T 88 -16.8 -3.00525 | opp_overlap 826295, overlap 826282 826290 GCTCTGTAAATGATA CGACGCACGCGGCGCC TCGC GGCATCGCGTGCGTAG CCAGGCTGAGGCGCG TERM 907 826319 - 826290 - T 87 -17.1 -2.7314 | opp_overlap 826295, overlap 826287 826282 CTGTAAATGATACGA CGCACGCGGCGCC TCGC GGCATCGCGTGCG TAGCCAGGCTGAGGC Bphy_0732 826700 - 826341 - | hypothetical protein TERM 908 826906 - 826882 - H 95 -13.6 -4.07568 | gap 1, opp_overlap 826882 CGCGGCCTGTTAAAA GGCCCGTCTCG CTCG CGAG-CGGGCC TTTCTCATTCGTGGC TERM 909 826882 - 826906 + H 95 -13.6 -4.08144 | gap 1, opp_overlap 826882 CGCGGCCTGTTAAAA GGCCCGTCTCG CTCG CGAG-CGGGCC TTTCTCATTCGTGGC TERM 910 827623 - 827650 + G 76 -9.9 -4.11692 | GCACCGTTCGACGAT GCGC-TCGCGGCC CGCA GGC-GCGAGGCGC TTTTAGGCGTGGCTC TERM 911 828034 - 828015 - g 78 -13.6 -3.28924 | GAGTTTGCCGGACAA CGTCGACG ATGG CGTCGACG GCTGGATCGTCGAGC Bphy_0733 827086 - 828213 + | glycosyl transferase group 1 Bphy_0734 828502 - 828242 - | GP29 TERM 912 828678 - 828654 - R 100 -11.4 -5.55769 | opp_overlap 828653 828654 CGGGACAACAAAAAA CCCGCAGAGC TTGAC GCTGTGCGGG CTTCTGTCCTGCGGT Bphy_0735 829900 - 829187 - | phosphoglycolate phosphatase Bphy_0736 830636 - 829938 - | ubiquinone biosynthesis O-methyltransferase TERM 913 830801 - 830818 + r 83 -14.1 -3.09834 | opp_overlap 830801 CGCAGGCATAAAAAA GCCCCGC CGAA GCGGGGC TTGGGTACTGCGGTA TERM 914 830818 - 830801 - R 100 -14.1 -5.28176 | opp_overlap 830801 CGCAGGCATAAAAAA GCCCCGC CGAA GCGGGGC TTGGGTACTGCGGTA Bphy_0737 831490 - 830843 - | OmpA/MotB domain-containing protein TERM 915 833959 - 833970 + G 74 -2.2 -4.82901 | TGAAGGAATTTTCGG CGGA CAAG TTCG TTTTTATGGCGACGG TERM 916 834464 - 834437 - g 74 -12.7 -3.21416 | overlap 834424 CATGCTGATCACCAA CACGGGCGTGC TGATCC GCACGCGCGTG TCAGAAATTCGAGAA Bphy_0738 832056 - 834635 + | DNA gyrase, A subunit TERM 917 834849 - 834832 - g 72 -12.7 -3.08211 | overlap 834829 AGCGCTGCAAAACCA GCAGCCG GCCC CGGCTGC TCCGGCCGCTGCTGC Bphy_0739 834752 - 835360 + | hypothetical protein TERM 918 835473 - 835512 + F 100 -21.6 -3.55815 | opp_overlap 835478, overlap 835478 TTTGAGCGTCAATGC GATAATGGCCGTTTGCGC TTGC GCGCAGACGGCCATTTTC TTTCAGGCGCTATTT TERM 919 835478 - 835507 + F 100 -20.1 -4.86731 | opp_overlap 835478, overlap 835473 GCGTCAATGCGATAA TGGCCGTTTGCGC TTGC GCGCAGACGGCCA TTTTCTTTCAGGCGC TERM 920 835507 - 835478 - f 93 -17.9 -3.36492 | opp_overlap 835478 835473 GCGTCAATGCGATAA TGGCCGTTTGCGC TTGC GCGCAGACGGCCA TTTTCTTTCAGGCGC Bphy_0740 835573 - 836655 + | phosphoserine aminotransferase Bphy_0741 836728 - 837810 + | chorismate mutase Bphy_0742 837889 - 839004 + | histidinol-phosphate aminotransferase TERM 921 839024 - 839046 + G 100 -9.1 -5.38047 | opp_overlap 839023 ATCCATGCAATCCAT GCGCCTCAT CGACT ACGAGGCGC TTTTTTCTGTGACTG Bphy_0743 839013 - 840017 + | prephenate dehydrogenase Bphy_0744 840037 - 841341 + | 3-phosphoshikimate 1-carboxyvinyltransferase Bphy_0745 841390 - 842076 + | cytidylate kinase Bphy_0746 842190 - 843959 + | ribosomal protein S1 Bphy_0747 843982 - 844305 + | integration host factor, beta subunit TERM 922 844407 - 844381 - f 72 -6.6 -4.2828 | opp_overlap 844386, overlap 844386 CGGCATTGACCAAAA GAAAAGCGCC TTTAAGG GGCGCTTTTT TTTCGTCCGTCGCGC TERM 923 844402 - 844386 - f 89 -6.5 -5.13722 | opp_overlap 844386, overlap 844381 TTGACCAAAAGAAAA GCGCC TTTAAGG GGCGC TTTTTTTTCGTCCGT TERM 924 844386 - 844402 + F 100 -7.9 -5.86965 | opp_overlap 844386 844381 TTGACCAAAAGAAAA GCGCCTT TAA GGGGCGC TTTTTTTTCGTCCGT Bphy_0748 844637 - 844930 + | hypothetical protein TERM 925 844937 - 844965 + F 81 -10.9 -3.79747 | overlap 844940 844941 844952 CTCATCTAGCCCTCT AACGCCGTGCGCC GCC GGCGCACGGTCTC TTTCGTCCTCCGTAC TERM 926 844940 - 844963 + F 88 -14.6 -3.48292 | gap 1, overlap 844937 844941 844952 ATCTAGCCCTCTAAC G-CCGTGCGCC GCC GGCGCACGGTC TCTTTCGTCCTCCGT TERM 927 844941 - 844961 + F 100 -18.3 -3.31162 | overlap 844940 844937 844952 TCTAGCCCTCTAACG CCGTGCGCC GCC GGCGCACGG TCTCTTTCGTCCTCC Bphy_0749 844987 - 846162 + | tetratricopeptide domain-containing protein TERM 928 846302 - 846330 + G 71 -10.4 -3.61239 | gap 1 GTCTTGTCACGGGCG CATGTC-TTGCCG AAGT CGGCAACGACGTG TTCTGTCTGGATGTC TERM 929 846933 - 846909 - g 72 -11.4 -3.4582 | opp_overlap 846918, overlap 846907 CGAGTTCACGAAATA CGCCGCGAAC GCGAT GCTCGCGACG CGCATCTCGTTCATG Bphy_0750 846253 - 847665 + | nucleotide sugar dehydrogenase TERM 930 847672 - 847712 + G 76 -13.9 -3.14132 | overlap 847698 CGTGCCTGAAGGCGC GACGCTCGCGCCCGAGG TGGGCGT CATCGCGCGCGAGCGGC TTGCTGCCGCCCGCG TERM 931 847837 - 847894 + G 100 -19.7 -3.35912 | gap 1, opp_overlap 847834 847832, overlap 847863 GCGCCAGGAAGACCG GCTGGGCGGCGCGGCGAACGTCGCGCGC AAC GCG-GCGGCGCTCGGTGCGCAGGCCGGC TTGCTGTGTGTAGTC TERM 932 848018 - 848049 + G 72 -11.6 -3.53012 | gap 1, opp_overlap 848008, overlap 848022 ATCAAGCTACGCGTG TTGTCGCGTCAGCAG CAG CTGCTG-CGCGTCGA TTTCGAGAAGGCGCC Bphy_0751 847658 - 848620 + | rfaE bifunctional protein TERM 933 848624 - 848659 + F 79 -12.6 -3.26471 | gap 2 CTCTTTCACTGATGC CCG-CGCGCGCC-CGT TTCATC GCGTGGCGCGCGGCGG TTCATCTGCGCATCC TERM 934 848718 - 848730 + G 75 -6.9 -4.36914 | overlap 848717 TGACCCTCATCGTCA CCGGC GCG GCTGG TTTTATCGGCAGCAA Bphy_0752 848702 - 849694 + | ADP-L-glycero-D-manno-heptose-6-epimerase Bphy_0753 849771 - 850139 + | hypothetical protein TERM 935 850270 - 850296 + F 90 -10.8 -4.68424 | opp_overlap 850264, overlap 850271 850291 TTCAGATGACTGGCT CCCGCGGCAG ATCCAGC CTGCCGCGGC TTTTTGCGTGCATTC TERM 936 850271 - 850295 + F 87 -14.3 -3.40331 | opp_overlap 850264, overlap 850270 850291 TCAGATGACTGGCTC CCGCGGCAG ATCCAGC CTGCCGCGG CTTTTTGCGTGCATT TERM 937 851153 - 851120 - g 71 -7.5 -4.08767 | gap 1 CGTATCTGCCGAAAA TTTTCGACCGCAGCCG CGT CGATCGCG-TCGAAAA CGTGAGCCAGGCAGC Bphy_0754 850444 - 851346 + | cysteine synthase B TERM 938 851417 - 851388 - T 100 -16.5 -4.0641 | opp_overlap 851394, overlap 851394 TCGCATCCAGATAAA GACAAACGCCGGC ATCT GCCGGCGTTTTTC ATGGTTGTGCGCGAG TERM 939 851411 - 851394 - T 100 -14.1 -4.43283 | opp_overlap 851394, overlap 851388 CCAGATAAAGACAAA CGCCGGC ATCT GCCGGCG TTTTTCATGGTTGTG TERM 940 851394 - 851411 + T 100 -14.1 -4.8269 | opp_overlap 851394 851388 CCAGATAAAGACAAA CGCCGGC ATCT GCCGGCG TTTTTCATGGTTGTG Bphy_0755 852826 - 851438 - | lytic murein transglycosylase B Bphy_0756 852859 - 853782 + | histone deacetylase superfamily protein TERM 941 854149 - 854101 - g 82 -6 -4.82901 | overlap 854104 854105 CGCGCTGCACAAAAA TG-ATGCTTGCGATCCAGCGGCTG CCG CAGCCGGTG-ATCGCTCGCGTGCA CGGCATTGCGACGGC Bphy_0757 853815 - 854624 + | enoyl-CoA hydratase/isomerase Bphy_0758 855581 - 854634 - | alpha/beta hydrolase fold protein TERM 942 855694 - 855750 + H 81 -8.6 -4.30576 | opp_overlap 855695 855699, overlap 855699 TTCAAATCCAATAAA AGTCACGGCGGCCGGTGCCGG-GAGCGT GCG ACGCTCGCTGGCAA-GTCCGCCGTTTCG TTTTCATGATCGAAC TERM 943 855749 - 855695 - H 93 -9.9 -4.75309 | opp_overlap 855694 855699, overlap 855699 TCAAATCCAATAAAA GTCACGGCGGCCGGTGCC-GGGAGCGT GCG ACGCTCGCTGGCAA-GTCCGCCGTTTC GTTTTCATGATCGAA TERM 944 855745 - 855699 - H 76 -13.7 -2.85242 | opp_overlap 855694 855699, overlap 855695 ATCCAATAAAAGTCA CGGCGGCCGGTGCC-GGGAGCGT GCG ACGCTCGCTGGCAA-GTCCGCCG TTTCGTTTTCATGAT TERM 945 855699 - 855745 + H 100 -15.9 -4.24384 | opp_overlap 855699 855695, overlap 855694 ATCCAATAAAAGTCA CGGCGGCCGGTGCCGG-GAGCGT GCG ACGCTCGCTGGCAA-GTCCGCCG TTTCGTTTTCATGAT Bphy_0759 855756 - 856790 + | ABC transporter related TERM 946 857040 - 857085 + G 100 -21.8 -3.14344 | overlap 857078 GGTCGGTTCGTCGAT CGGCACGGCGGCGGCCGTCG TGCCGC TGACGATCGCCGCCGCGCCG TTCATCGCGCGCCTC Bphy_0760 856780 - 857433 + | binding-protein-dependent transport systems inner membrane component TERM 947 858165 - 858135 - g 85 -17 -3.07962 | GTCCATATGTGAACA TCATTGCGATCCGC GAG GCGGACCGCAATAA GCCGTGGGTGGCGAA Bphy_0761 857462 - 858262 + | YaeC family lipoprotein TERM 948 858331 - 858349 + F 90 -7.4 -5.055 | opp_overlap 858314 858311 858331 CCGAATTGGTAGCAA CCCGGA CTTGGCC TCCGGG TTTTTTCCGGATTAG Bphy_0762 858506 - 859255 + | electron transfer flavoprotein alpha/beta-subunit Bphy_0763 859283 - 860218 + | electron transfer flavoprotein alpha subunit TERM 949 860290 - 860261 - f 81 -13 -3.55071 | gap 1, opp_overlap 860261 CGACACCGGCGGAAA GAGGCGCTAGGAT GACGA ATCC-AGCGCCTC TTTTTTCTTTGGGGG TERM 950 860261 - 860290 + F 100 -13 -5.63517 | gap 1, opp_overlap 860261 CGACACCGGCGGAAA GAGGCGCTAGGAT GACGA ATCC-AGCGCCTC TTTTTTCTTTGGGGG Bphy_0764 860321 - 862111 + | acyl-CoA dehydrogenase domain-containing protein TERM 951 862133 - 862156 + T 100 -18.2 -3.72695 | opp_overlap 862133 862136, overlap 862136 CGGTGCATCGAACAA CAACGGCGCC CGAG GGCGCCGTTG TTTCGTCAACAAAAT TERM 952 862156 - 862133 - T 100 -18.2 -3.67597 | opp_overlap 862133 862136, overlap 862136 CGGTGCATCGAACAA CAACGGCGCC CGAG GGCGCCGTTG TTTCGTCAACAAAAT TERM 953 862136 - 862153 + T 100 -14.1 -4.00042 | opp_overlap 862133 862136, overlap 862133 TGCATCGAACAACAA CGGCGCC CGAG GGCGCCG TTGTTTCGTCAACAA TERM 954 862153 - 862136 - T 100 -14.1 -3.97307 | opp_overlap 862136 862133, overlap 862133 TGCATCGAACAACAA CGGCGCC CGAG GGCGCCG TTGTTTCGTCAACAA Bphy_0765 863470 - 862184 - | D-amino-acid dehydrogenase TERM 955 862714 - 862694 - G 90 -7.6 -4.8667 | gap 1, opp_overlap 862706 GAGACCCGACAAAAA CTGGG-TCG AGTA CGAGCCCAG CGCGACAACGAAGTT Bphy_0766 863636 - 864124 + | AsnC family transcriptional regulator Bphy_0767 864229 - 865389 + | radical SAM domain-containing protein Bphy_0768 865945 - 865412 - | hypothetical protein Bphy_0769 866299 - 866553 + | ribosomal protein S16 TERM 956 866703 - 866718 + G 71 -10.4 -3.58037 | opp_overlap 866696 GGCGAAAAGGCAGCC TGGCGC GAAG GCGCCA TTTGGCCCGTTCGTC Bphy_0770 866650 - 867345 + | 16S rRNA processing protein RimM TERM 957 867731 - 867755 + G 84 -17.3 -2.78384 | overlap 867710 GCGGCCGCTATGAGG CGATCGATCAG CGT CTGATCGATCG TGTCGTCGACGAAGA Bphy_0771 867370 - 868137 + | tRNA (guanine-N1)-methyltransferase Bphy_0772 868282 - 868665 + | ribosomal protein L19 TERM 958 868681 - 868697 + F 100 -9.4 -5.72622 | opp_overlap 868681 AAGCTGTAAGAAAAA GCACCC CTCGC GGGTGC TTTTTTGTTTGTCAG TERM 959 868697 - 868681 - f 100 -9.4 -5.08088 | opp_overlap 868681 AAGCTGTAAGAAAAA GCACCC CTCGC GGGTGC TTTTTTGTTTGTCAG TERM 960 869337 - 869351 + G 93 -3.4 -5.44119 | overlap 869338 CGTGCTGAACTGGGA AGGCGG TAA CCGTCG TTTTTTTGCAATGCC Bphy_0773 868759 - 869466 + | NUDIX hydrolase TERM 961 870205 - 870217 + G 74 -10.5 -3.75024 | TGCGTTCTCCACCTT CGCGC AGC GCGCG TTCTTCGTGATCGAC Bphy_0774 869630 - 870568 + | cobalamin biosynthesis protein CbiB Bphy_0775 870944 - 870657 - | hypothetical protein Bphy_0776 871902 - 870949 - | ribosome small subunit-dependent GTPase A TERM 962 871660 - 871707 + g 71 -11.8 -3.2614 | opp_overlap 871658 871656, overlap 871661 871664 GCGATACAGCAGATT GCGCCGTTCGCCGATCTCGACG ATCA CGCCCTGATCGGCGGACGTCGG TTCGTATAGCACCTG TERM 963 871661 - 871706 + g 74 -15.3 -2.5547 | opp_overlap 871658 871656, overlap 871660 871664 CGATACAGCAGATTG CGCCGTTCGCCGATCTCGACG ATCA CGCCCTGATCGGCGGACGTCG GTTCGTATAGCACCT TERM 964 871664 - 871703 + g 70 -14.2 -2.58714 | opp_overlap 871658 871656, overlap 871661 871660 TACAGCAGATTGCGC CGTTCGCCGATCTCGACG ATCA CGCCCTGATCGGCGGACG TCGGTTCGTATAGCA Bphy_0777 873158 - 871899 - | Ste24 endopeptidase TERM 965 873540 - 873551 + G 75 -7.2 -4.36914 | opp_overlap 873526 873540, overlap 873526 AGCGGACGCCACAGA GCGC ATCC GCGC TTTTCTCGGCCAGCA Bphy_0778 873247 - 873870 + | exonuclease RNase T and DNA polymerase III Bphy_0779 874500 - 873874 - | molybdenum cofactor synthesis domain-containing protein Bphy_0780 875062 - 874481 - | hypothetical protein TERM 966 875030 - 875056 + g 76 -14.4 -3.10112 | GCTGGGACGGTCATA CCCGTTGTCGTC GAC GACGGCGGCGGG TTCCATGGGTTGAAT Bphy_0781 875311 - 876681 + | peptidase U62 modulator of DNA gyrase Bphy_0782 877373 - 876873 - | dihydrofolate reductase TERM 967 877117 - 877086 - G 100 -10.9 -4.7254 | opp_overlap 877106, overlap 877087 ACCGCCTATCAAAAA CGCCTCGCC-CGCAC CATC GCGCGCGGCGAG-CG CCAACGCGTCGTCGA TERM 968 877118 - 877087 - G 72 -10.9 -3.43042 | gap 2, opp_overlap 877106, overlap 877086 CCGCCTATCAAAAAC GC-CTCGCC-CGCAC CATC GCGCGCGGCGAGCGC CAACGCGTCGTCGAG Bphy_0783 879000 - 877513 - | sigma-54 dependent trancsriptional regulator TERM 969 878307 - 878293 - G 72 -12.8 -3.15544 | GTTGATCGGGACGAA CGGCGC CTT GCGCCG CGGCGAACGCTCGTG TERM 970 878719 - 878740 + g 71 -12.3 -3.18681 | gap 1, opp_overlap 878701 CGCCATGTCGACGAT GCCCGCGCAC AAG GT-CGCGGGC TTGATGAGCTTGCCG Bphy_0784 879924 - 879025 - | hypothetical protein TERM 971 879697 - 879715 + g 71 -8 -4.15106 | GCCATAGCCCGGCGC GCCGCGGC CGC GCTGCGAC TTTTCCAGATTCGTC TERM 972 879867 - 879908 + g 71 -8.1 -4.10437 | gap 3, opp_overlap 879849 879876 879878, overlap 879868 CGCGCAGCATCGCGG C-GGCAGGAATAGCCGCGAG CCGGA CCCGCGGCT-TTCC-GCCTG TTGTTTCGTTCATCA TERM 973 879868 - 879906 + g 77 -11.8 -3.63901 | gap 2, opp_overlap 879849 879876 879878, overlap 879867 GCGCAGCATCGCGGC GGCAGGAATAGCCGCGAG CCGGA CCCGCGGCT-TTCC-GCC TGTTGTTTCGTTCAT Bphy_0785 881315 - 880032 - | peptidase C39 bacteriocin processing TERM 974 881044 - 881056 + g 71 -7.7 -4.13014 | opp_overlap 881036 ACAACCATCATCCGG CGGAT CAG ATCCG TTTTGGGGATGTCGA TERM 975 881322 - 881377 + r 89 -16 -3.21416 | gap 1, overlap 881323 881324 881347 CCGGGACATGCTGGT C-TCCTTCCCGAATGCGCCGGCGGCTG CAT CGGCCGCCGGCGCATCCCGTATGGCTG TTCCTGCTACCGCTG TERM 976 881323 - 881375 + r 100 -19.7 -3.17051 | overlap 881322 881324 881347 CGGGACATGCTGGTC TCCTTCCCGAATGCGCCGGCGGCTG CAT CGGCCGCCGGCGCATCCCGTATGGC TGTTCCTGCTACCGC TERM 977 881324 - 881374 + r 100 -23.2 -2.50016 | overlap 881323 881322 881347 GGGACATGCTGGTCT CCTTCCCGAATGCGCCGGCGGCTG CAT CGGCCGCCGGCGCATCCCGTATGG CTGTTCCTGCTACCG Bphy_0786 882398 - 881922 - | hypothetical protein TERM 978 882077 - 882033 - G 100 -25.8 -3.14564 | gap 1, opp_overlap 882068 TGAGCCGTGCATCAA CTGCGGCGGCGCCGCGACCAT CACC ATGTCCGCGGCGCCGCCGC-G CTGGCGCGACAACAT TERM 979 882131 - 882159 + g 74 -10.2 -3.70076 | overlap 882157 TCGTCGCCGCGCCGT CGGCGGGCACGT TCAGC ACCTGCGCGCCG TTTAAATCGGTTTCA TERM 980 884301 - 884289 - g 71 -9.1 -3.70902 | overlap 884293 TGCGGCATATGGAAA GCGAG CCG CTCGC GCAACACGCGGACAT Bphy_0787 882947 - 884341 + | sigma-54 dependent trancsriptional regulator TERM 981 884365 - 884343 - f 71 -10.4 -3.57144 | TGCCGCATCTGTAAA GCGGCGGGGC GCT GCCCCCCTGC GTGCGAGACTGTCAT TERM 982 884391 - 884410 + F 100 -16.4 -4.13995 | opp_overlap 884391 GTCATCGCGAATGAA GCCCGGCC GGCT GGCCGGGC TTTCCTTTCTGCAGC TERM 983 884410 - 884391 - f 89 -16.4 -3.34895 | opp_overlap 884391 GTCATCGCGAATGAA GCCCGGCC GGCT GGCCGGGC TTTCCTTTCTGCAGC Bphy_0788 884570 - 885541 + | thymidylate synthase TERM 984 885597 - 885573 - T 93 -12.8 -4.13767 | opp_overlap 885573 TCCCCGATGTGAAAA CGCCCACTGC CATTC GCGGTGGGCG TTTTCATTCGCGGGC TERM 985 885573 - 885597 + T 100 -15 -4.4078 | opp_overlap 885573 TCCCCGATGTGAAAA CGCCCACTGC CATTC GCGGTGGGCG TTTTCATTCGCGGGC Bphy_0789 888175 - 885629 - | putative prolin-rich transmembrane protein TERM 986 886863 - 886913 + g 73 -13.9 -2.82023 | opp_overlap 886874, overlap 886859 TGGTTGGTCGGCTGG CCGTGC-ACGAACGCCGCTGCCGGC ATC GCCGTCA-CGGCGCCCGGCGCACGG TAGTTGATATACGTG TERM 987 886901 - 886874 - G 72 -13.4 -3.14132 | gap 1, opp_overlap 886863 886859 CTGGCCGTGCACGAA CGCCGCTGCCGGC ATC GCCGTCA-CGGCG CCCGGCGCACGGTAG Bphy_0790 889042 - 888326 - | ArsR family transcriptional regulator TERM 988 889007 - 888955 - G 70 -13.9 -2.62616 | opp_overlap 888953 TCAGCGCCCACAGCA TCGCGGCCCGGCCCGGATCGGCGAG CAG CGCACCGATCCGGCTCAAGCCGGGG AAGTGATTCGATTCT Bphy_0791 889228 - 889368 + | hypothetical protein TERM 989 890302 - 890353 + G 74 -2.2 -4.82901 | gap 2, overlap 890335 CGGCCATTCGATCGG CGACGGCGC--ACAGATCATCCAG TGGCAT CTGGTCGGCATGTTCGCGCCGTCG TTTTTCTCGGCGCGC Bphy_0792 889502 - 890761 + | major facilitator transporter TERM 990 891254 - 891302 + G 75 -12.5 -3.54424 | gap 4, overlap 891287 891288 GGGCTTGCTCGATGG GCGC-CGCGCGACCACGCACTGGCG CGA CGCCGG-GCG-GCTCGC-CGAGCGC TTTGCGCGCGTGCAG Bphy_0793 890793 - 891884 + | AraC family transcriptional regulator Bphy_0794 891968 - 892474 + | thioesterase superfamily protein Bphy_0795 893938 - 892538 - | fumarate hydratase, class II TERM 991 894012 - 893983 - R 70 -12.1 -2.71791 | gap 1, overlap 893982 AGGCTTCCGGGAAAG CGGCGCAGCACGCG CTC CTCG-ACTGCGCCG TATGACTGTGCGGCT Bphy_0796 895714 - 894026 - | phospholipase D/transphosphatidylase TERM 992 895088 - 895100 + g 73 -9.1 -3.8211 | CGCGATCTGGTTGTC GGCGA TCA TCGCC TTGTTGTGCATGCGC Bphy_0797 897515 - 896124 - | MATE efflux family protein TERM 993 896401 - 896387 - G 85 -7.8 -4.63527 | CGACGATCTGAAAAA TGGCCG CGA CAGCCA GCAGCGAACTGGCAA TERM 994 896740 - 896726 - G 72 -11.4 -3.51934 | overlap 896724 CCGTCGCGAGAAACA GCGTCG ACT CGACGC CATACGTGATCGCCA TERM 995 897545 - 897567 + r 87 -6.9 -5.01422 | gap 1, overlap 897546 GCGCGATAGGCGGTA C-GCGCGGTC AGCA GCCCGCGCTG TTTGTTTTTCTGTCC TERM 996 897546 - 897565 + r 82 -10.6 -4.10863 | overlap 897545 CGCGATAGGCGGTAC GCGCGGTC AGCA GCCCGCGC TGTTTGTTTTTCTGT Bphy_0798 897944 - 897726 - | hypothetical protein TERM 997 898179 - 898156 - H 82 -14.6 -3.01712 | opp_overlap 898138 CCGGTCTGTGGAATA GCCTGCCGCA TTTT TGCGACAGGC GGATAGCGTGGGCGT Bphy_0799 898268 - 898720 + | putative signal peptide protein Bphy_0800 898786 - 899052 + | hypothetical protein TERM 998 899102 - 899119 + F 100 -14.1 -4.87803 | CCGTTCGGCGCACCA GCCCGGC ACGC GCCGGGC TTTTCTTTGCGCGTA TERM 999 901435 - 901393 - g 80 -8.5 -4.45771 | gap 1, opp_overlap 901424 AGGCCAAAATAGAAA TCGCGGCGAAGCTCAG AAAGATGTGGGA CTGAGCG-CGCCGCGA TCGGGCGGCGCCCGA Bphy_0801 899172 - 901424 + | UvrD/REP helicase Bphy_0802 902252 - 901485 - | hypothetical protein TERM 1000 902057 - 902082 + g 95 -14.7 -4.18018 | CCCATGCGTACTGGC CGCCCTGCAGC ATCC GCTGCACGGCG TTTTCGGTCAGCGGC Bphy_0803 902805 - 902482 - | branched-chain amino acid transport Bphy_0804 903569 - 902802 - | AzlC family protein TERM 1001 902954 - 902933 - G 71 -7.9 -4.11664 | gap 1 GCCAGAAGAACGAAA GCGCGCCGGC TGT GACGGCG-GC CCCCAGATACCGCAC Bphy_0805 904509 - 903682 - | AraC family transcriptional regulator Bphy_0806 905055 - 904552 - | CreA family protein TERM 1002 905194 - 905175 - R 100 -15 -5.47159 | opp_overlap 905170 905169 CGCAACAAAGAAAAA GGCCCGCA CGTA TGCGGGCC TTCGAATTTTGGCTC TERM 1003 905330 - 905311 - R 100 -9.3 -5.36441 | opp_overlap 905311 905310 TTGCTACATAAAAAA GCCCGTT GTGGTT AACGGGC CTTTGCAATTCTTGG TERM 1004 905534 - 905550 + r 70 -5.1 -4.42238 | opp_overlap 905533 GTGACTTCGATCAAC GCTCG AGCAGTG CGAGC TTTTCCTTCACGTCC Bphy_0807 905852 - 905529 - | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Bphy_0808 906133 - 907332 + | nicotinate phosphoribosyltransferase TERM 1005 907963 - 907988 + G 82 -16.1 -3.14132 | TGGTGCTGCTCGCCG GCCCGCAGACG TATG CGTCGGCGGGC TTGCTGCCCGAGACG Bphy_0809 907542 - 908204 + | hypothetical protein TERM 1006 908796 - 908829 + G 71 -7.4 -4.09551 | overlap 908818 TCTGGTCGCGAATGC TGGCGGTTCGCT GTCGCCGCTG GGCGACCCGCCA TTGTTTCTCGGCTTT Bphy_0810 908215 - 909675 + | citrate transporter Bphy_0811 909730 - 910719 + | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding Bphy_0812 910716 - 912200 + | hypothetical protein TERM 1007 912244 - 912216 - T 100 -20.4 -4.16943 | opp_overlap 912216 GGCCAGACGTGAAAA GGGCGCGTGATC GCGAG GATCACGCGCCC TTTTTCTGGCCGAAG TERM 1008 912216 - 912244 + T 100 -20.4 -4.82901 | opp_overlap 912216 GGCCAGACGTGAAAA GGGCGCGTGATC GCGAG GATCACGCGCCC TTTTTCTGGCCGAAG Bphy_0813 912763 - 912275 - | GCN5-related N-acetyltransferase Bphy_0814 913047 - 912763 - | hypothetical protein Bphy_0815 914396 - 913101 - | molybdenum cofactor synthesis domain-containing protein Bphy_0816 915092 - 914478 - | molybdopterin-guanine dinucleotide biosynthesis protein A TERM 1009 914835 - 914799 - G 74 -13 -3.24747 | gap 1, overlap 914831 914833 CGCCGACAGCACGAA CGGCGTGCTCGCGGCGC GCAG GC-CCGCAAGCAGACCG GCGAGCGGGCCGGGG Bphy_0817 916220 - 915108 - | molybdenum cofactor biosynthesis protein A TERM 1010 916131 - 916100 - G 74 -10.9 -3.64703 | gap 1, opp_overlap 916094 GGTCCGTCACCGAAA TACGCAGATCGCGC AACGG GCGCGA-CAGCGTA TCGGTCAATTCGCCG TERM 1011 916348 - 916330 - R 100 -16 -5.08601 | opp_overlap 916330 TGACGGCAATAAAAA GCCCGCCT TGG AGGCGGGC TTTTTCGGGGTGCCC TERM 1012 916330 - 916348 + r 100 -16 -4.59773 | opp_overlap 916330 TGACGGCAATAAAAA GCCCGCCT TGG AGGCGGGC TTTTTCGGGGTGCCC Bphy_0818 919685 - 916407 - | ribonuclease TERM 1013 916488 - 916463 - G 80 -14.7 -3.16881 | opp_overlap 916480 TATCGACGGGAGGAA GCGCCTTGCGC TCGC GCGCAACGCGC GCGGGCTTCACGGTC TERM 1014 917641 - 917669 + g 70 -10.9 -3.35522 | overlap 917602 917639 TCCACACGTTCCGGA CGTGCCTCGCGTG CTT CACGCGGTTCACG TGTTTCGCGGCCTTC TERM 1015 919761 - 919779 + H 71 -8.1 -4.09656 | gap 1 CCGGCGGGCGGACAG GGCAGCGG CATG CCGC-GCC TTATTGTGTTTTCAC TERM 1016 920950 - 920940 - g 84 -8.2 -4.57073 | overlap 920941 GATGCTCGCGAAAAA GCGC GCG GCGC TCGTCAATCTTCACG Bphy_0819 920449 - 921510 + | RluA family pseudouridine synthase Bphy_0820 921491 - 922150 + | HAD family hydrolase Bphy_0821 922147 - 922539 + | Rieske (2Fe-2S) domain-containing protein TERM 1017 923452 - 923400 - g 79 -10.7 -4.09685 | CTGGACTGGGGAAAA GAGCGTCG-AGTTGGGTCTCGCCGA CGGCT TCGGCGACA-CGAACTACGTCGCTC GCGAAATCATCAAGG Bphy_0822 922585 - 923595 + | peptidase S49 TERM 1018 923618 - 923641 + T 85 -15.2 -3.15663 | TGGGAGCCTGGGAGC GGCGGCCGAC ATCT GGCGGCCGCC TTCCTGGGCGTCAGT TERM 1019 923685 - 923675 - T 74 -2.4 -5.01535 | opp_overlap 923675 923677, overlap 923676 923677 CCAGAATCAGAAAAA TCGC CGG GCGC TTGTGGAGTTCAGGC TERM 1020 923677 - 923706 + T 78 -9.3 -3.96068 | gap 1, opp_overlap 923675 923676 923677, overlap 923675 AGAATCAGAAAAATC GCCGGGCGCTTG TGGAGTT CAGGCG-CCGGC TTCTTCTTCCAGTCG Bphy_0823 924371 - 923652 - | uroporphyrin-III C/tetrapyrrole methyltransferase Bphy_0824 924988 - 924368 - | maf protein TERM 1021 924769 - 924811 + g 81 -11.3 -4.18018 | gap 1, opp_overlap 924763 924766 CAGAGCCAATGACGA GCGCGCGCCCGTCGCC CGCAAGCGCCAC GGCGACGG-CGCGGGC TTTTGCCTGCGCGAG TERM 1022 924814 - 924837 + g 71 -7.4 -4.15788 | gap 1, overlap 924815 CGACGGCGCGGGCTT TTGC-CTGCGC GAG GCGCAGCGCGG TTTGTTCGGGCAATT Bphy_0825 925228 - 925866 + | hypothetical protein Bphy_0826 925980 - 926159 + | ribosomal protein L32 TERM 1023 926267 - 926248 - f 76 -4.9 -4.72272 | opp_overlap 926249, overlap 926249 CCGGTTGATCAAAAA GGCGGCA TTCAAC TGCCGCT TTTTTGTGCCTGAAA TERM 1024 926249 - 926266 + F 100 -8.4 -5.28176 | opp_overlap 926248 926249 CGGTTGATCAAAAAG GCGGCA TTCAAC TGCCGC TTTTTTGTGCCTGAA TERM 1025 926574 - 926542 - g 73 -5.6 -4.44667 | CTTCGCAAGAAGAAA GACTCG-TCGATGCGC GTG GCGC-TCAATCGCGTC AAAGACGACGAGGCG TERM 1026 927272 - 927255 - g 76 -5.5 -4.57569 | opp_overlap 927244 927246, overlap 927256 TGATGCCGTCAAAAA TGGCGTT CTTG AACGCCT TGCCCGCGCGATGGA Bphy_0827 926296 - 927426 + | fatty acid/phospholipid synthesis protein PlsX Bphy_0828 927426 - 928415 + | 3-oxoacyl-(acyl-carrier-protein) synthase III Bphy_0829 928509 - 929441 + | malonyl CoA-acyl carrier protein transacylase Bphy_0830 929507 - 930256 + | 3-oxoacyl-(acyl-carrier-protein) reductase Bphy_0831 930404 - 930643 + | acyl carrier protein TERM 1027 930798 - 930818 + F 79 -12.7 -3.38314 | overlap 930797 GTTCAAGGCGCACTG GCCGATAAA GCA TTTATCGGC TCTTTCGCCATTGCG TERM 1028 930965 - 930920 - f 90 -16.3 -3.60296 | gap 1, opp_overlap 930922, overlap 930922 GATCGTCAGGTTAAA CAGCCACAGG-GCACACAGG GCGCTTT CCTGTGCGCTCCTGTGGCTT TTGTTTTGTCATCTA TERM 1029 930922 - 930963 + F 100 -17.4 -5.20781 | gap 1, opp_overlap 930920 930922 TCGTCAGGTTAAACA GCCACAGG-GCACACAGGG CGCTT TCCTGTGCGCTCCTGTGGC TTTTGTTTTGTCATC TERM 1030 930963 - 930922 - f 100 -18.9 -3.38046 | gap 1, opp_overlap 930922, overlap 930920 TCGTCAGGTTAAACA GCCACAGG-GCACACAGG GCGCTTT CCTGTGCGCTCCTGTGGC TTTTGTTTTGTCATC Bphy_0832 930949 - 932235 + | 3-oxoacyl-(acyl-carrier-protein) synthase 2 TERM 1031 932346 - 932304 - f 100 -21.2 -3.14132 | opp_overlap 932304 932333 932334 932335, overlap 932325 CCGCTCCCGCATTAA TCGGCGGACCCTCGCAACGC ATT GCGCTGCGGCGGTCCGCCGC ATTGCATCTGGCGAC TERM 1032 932304 - 932347 + F 100 -19.6 -3.12351 | gap 1, opp_overlap 932304 932325, overlap 932333 932334 932335 CCGCTCCCGCATTAA T-CGGCGGACCCTCGCAACGC ATT GCGCTGCGGCGGTCCGCCGCA TTGCATCTGGCGACC TERM 1033 932657 - 932684 + G 91 -8.5 -4.74132 | gap 1, overlap 932658 TTGCAGCAGCTGCTA C-TCGCGGTCGA CATGC TTGACCGCGATG TTTTTCGTGAACTCT TERM 1034 932658 - 932682 + G 84 -12.2 -3.98658 | overlap 932657 TGCAGCAGCTGCTAC TCGCGGTCGA CATGC TTGACCGCGA TGTTTTTCGTGAACT Bphy_0833 932348 - 932731 + | hypothetical protein Bphy_0834 932864 - 933463 + | ECF subfamily RNA polymerase sigma-24 factor TERM 1035 933719 - 933695 - g 78 -4.1 -4.72272 | opp_overlap 933702 GCGCTGGATCAAAAA GATCGCGCGGC ATG GTCGTGCTATC ACCTGATCGGCGACG Bphy_0835 933548 - 934201 + | anti sigma-E protein, RseA Bphy_0836 934206 - 935246 + | sigma E regulatory protein, MucB/RseB Bphy_0837 935266 - 936774 + | protease Do Bphy_0838 936771 - 937049 + | glutaredoxin 2 TERM 1036 937163 - 937191 + F 93 -9.5 -4.7629 | opp_overlap 937163 TTCACTTACTTACAA GGCGTGCTCCG CAATCGT CCGAGCGCGCC TTTTTCGCTTGATCG Bphy_0839 937214 - 939007 + | GTP-binding protein LepA TERM 1037 939142 - 939112 - g 86 -14.7 -3.53012 | gap 1 GTTTTCCTGCCGAAA CGGCGTCGGGCTGC TGAC GCAGCC-GTCGCCG AGTTCGACAATCAGC TERM 1038 939212 - 939192 - g 100 -13.9 -4.25104 | overlap 939153 939156 CTTCGCGGACGAAAA CGCGCCCGC CAC GCGCGCGCG TCTGCGTGAGGAGAA Bphy_0840 939028 - 939921 + | signal peptidase I TERM 1039 940236 - 940250 + G 100 -12.8 -4.64334 | ATTCCGTTCTGAACT GCGCGG TGG CCGCGC TTTTGTTCCAACGTT TERM 1040 941349 - 941391 + G 78 -16.2 -2.71144 | opp_overlap 941331 CGGGCGATCTCGAAC CCGGCGTCGCCGGCGCGG TGCATAC CCGCGTGGCCGATGCCGG TCATTGAACGCAATA Bphy_0841 940073 - 941398 + | ribonuclease III TERM 1041 942142 - 942156 + G 79 -7 -4.58283 | opp_overlap 942141, overlap 942143 AGTTTGAGACGGAAG GGCGCC TGC GGCGCA TTTTTGCAACGATTC Bphy_0842 941499 - 942362 + | GTP-binding protein Era TERM 1042 942459 - 942515 + G 76 -13.6 -3.05384 | opp_overlap 942472 942499 942500 CGACGACGCCACGGG CGCGCGGGACGAACC-GTTCGCGCCGCC GGC GCCAGC-CAAACCGGCGCGTCCCGCGCG TTCCGTGAAGCGCGG TERM 1043 942532 - 942554 + G 76 -5.5 -4.57569 | gap 1, opp_overlap 942500 942499, overlap 942533 TCCGTGAAGCGCGGC ACGTCG-CGC AAAA GCGGCGACGA TTTTTCGGAGGATGG TERM 1044 942640 - 942599 - g 89 -12.8 -4.08692 | opp_overlap 942623, overlap 942587 942602 CAACGCCGCGTAAAA CATCGGCGCGCCGTTCGC CGTCTC GCGTGCCGCGCGCCGCTG CCTCCGAATTCCGCA TERM 1045 943261 - 943284 + G 75 -3.1 -4.72986 | gap 1 CGAGCGCAGACCATC GCGCA-AAGC AAGAC GCTGATGCGC TTTTTGCTCAACATC Bphy_0843 942349 - 943359 + | DNA repair protein RecO Bphy_0844 943356 - 944120 + | pyridoxal phosphate biosynthetic protein PdxJ Bphy_0845 944144 - 944551 + | holo-acyl-carrier-protein synthase Bphy_0846 944619 - 945650 + | Beta-N-acetylhexosaminidase TERM 1046 945702 - 945678 - T 100 -12.2 -4.49316 | gap 1, opp_overlap 945678 AGTAGCAATAAGAAA GGACGGGTCTC GATC GAG-CCCGTCC TTTTGTTTTGCCGGC TERM 1047 945678 - 945702 + T 100 -12.2 -5.07652 | gap 1, opp_overlap 945678 AGTAGCAATAAGAAA GGACGGGTCTC GATC GAG-CCCGTCC TTTTGTTTTGCCGGC Bphy_0847 947110 - 945728 - | two component, sigma54 specific, Fis family transcriptional regulator TERM 1048 946499 - 946462 - G 72 -13.4 -3.08679 | gap 1, overlap 946465 GCTCGTGACCGAACA GCAGGCTGTCGAGCGGC CGGCC GCC-CGCGACGGCCTGC GCCGAGCGGCAGTCG TERM 1049 947062 - 947037 - G 75 -3.9 -4.65895 | GTGTCGACGGAAAAA CCGTCGGCG GCCAGAAT CGCGGACAG GCCTGACAGGCTATT TERM 1050 947138 - 947185 + r 100 -22.1 -3.21416 | TGTTCAGATGGACGG GTGTCCGACGTGCGCGGC-CCGC CGGG GCGGCGCCGTGCGCG-CGGACGC TTGATGATCGGGGTG TERM 1051 947250 - 947292 + r 74 -8.2 -4.13945 | opp_overlap 947261 CAAAAGTCCCGGTTC CGGTCGAAGAAGCGGCGCAC CTC GAGTTCCGCTTCGTCGCGCG TTTTGCCATAGCGCT Bphy_0848 947440 - 947234 - | CsbD family protein TERM 1052 947682 - 947655 - R 100 -12.8 -5.40072 | opp_overlap 947661, overlap 947661 CGGTCGCGAAAAAAA GAAAAAGCGCCC CGAA GGGCGCTTTTTA ATTCCAAAGACCCTG TERM 1053 947676 - 947661 - R 100 -11.8 -5.86609 | opp_overlap 947661, overlap 947655 CGAAAAAAAGAAAAA GCGCCC CGAA GGGCGC TTTTTAATTCCAAAG TERM 1054 947661 - 947676 + r 100 -11.8 -4.8622 | opp_overlap 947655 947661 CGAAAAAAAGAAAAA GCGCCC CGAA GGGCGC TTTTTAATTCCAAAG Bphy_0849 948300 - 947743 - | translation elongation factor P Bphy_0850 949810 - 948629 - | hypothetical protein TERM 1055 949092 - 949079 - G 88 -9.5 -4.59773 | overlap 949080 GGGCAGGCCGAAAAA GCGCG CAAC CGCGC CCGACACGCGGCCTT TERM 1056 950071 - 950045 - g 72 -2.9 -4.62069 | gap 1, overlap 950046 950047 GTTCGACCCGAAAAA GGTGT-TGCGGC AGCT GCCGCACATGCC CGGCGTCTATCGTTA Bphy_0851 949920 - 952142 + | excinuclease ABC, C subunit Bphy_0852 952283 - 952873 + | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase Bphy_0853 953121 - 952978 - | hypothetical protein TERM 1057 953235 - 953279 + H 76 -12.9 -3.14463 | opp_overlap 953243 953248, overlap 953249 953270 CGAGACTCGTCTCCC GCTCCAAACACAGGGGGAAGC CAA GCTTCCCTTTTTGTTTGATGC TTCATAAGAAGCATT TERM 1058 953249 - 953265 + H 100 -12.3 -5.34309 | opp_overlap 953248 953243, overlap 953235 CGCTCCAAACACAGG GGGAAGC CAA GCTTCCC TTTTTGTTTGATGCT TERM 1059 953360 - 953343 - H 84 -4.1 -5.28176 | GTCATGCAGAAAAAA TCTGCGA GCCG TTGCAGA TGCAACTGAGTACGG TERM 1060 953502 - 953475 - H 100 -18.6 -3.9941 | opp_overlap 953475 953480, overlap 953480 GCCTCCAGAAGCAAA GAAAAGCCCCGA GATG TCGGGGCTTTTC TTTTTCAGCGCTTCA TERM 1061 953475 - 953502 + H 100 -18.6 -4.59853 | opp_overlap 953475 953480, overlap 953480 GCCTCCAGAAGCAAA GAAAAGCCCCGA GATG TCGGGGCTTTTC TTTTTCAGCGCTTCA TERM 1062 953497 - 953480 - H 100 -12.7 -5.02357 | opp_overlap 953475 953480, overlap 953475 CAGAAGCAAAGAAAA GCCCCGA GATG TCGGGGC TTTTCTTTTTCAGCG TERM 1063 953480 - 953497 + H 100 -12.7 -5.26119 | opp_overlap 953480 953475, overlap 953475 CAGAAGCAAAGAAAA GCCCCGA GATG TCGGGGC TTTTCTTTTTCAGCG TERM 1064 953721 - 953767 + G 75 -12 -3.49653 | overlap 953746 953747 GACGCGTGGCATCTT CTGGCATACGGCGACCACGCGC CCG GCGCGCGCGTGCCGCTTGCCGG TTATCTGCGCGTGCT Bphy_0854 953535 - 954035 + | GCN5-related N-acetyltransferase Bphy_0855 954938 - 954048 - | putative inner membrane protein Bphy_0856 955470 - 954991 - | hypothetical protein Bphy_0857 956114 - 955488 - | electron transport protein SCO1/SenC TERM 1065 956512 - 956532 + G 100 -7.5 -5.52096 | overlap 956513 AGCACTTCCCGCTTT TCTGTCTCC GAC GGAGACGGC TTTTTTCTTCGATTT TERM 1066 956513 - 956531 + G 79 -11 -3.88817 | overlap 956512 GCACTTCCCGCTTTT CTGTCTCC GAC GGAGACGG CTTTTTTCTTCGATT TERM 1067 957045 - 957001 - g 89 -13 -4.17878 | opp_overlap 957015 957018, overlap 957004 CGAAATCAAACCAAA GGAT-GTCGATAAAGGCCGCGC GCT GCGCG-CCTTTCTCGACGAGCC GCCGTTTACAGGCCG TERM 1068 957041 - 957004 - g 72 -13.5 -3.08604 | gap 1, opp_overlap 957015 957018, overlap 957001 AATCAAACCAAAGGA TGTCGATAAAGGCCGCGC GCT GCGCG-CCTTTCTCGACG AGCCGCCGTTTACAG TERM 1069 957015 - 957031 + G 73 -9.3 -3.85698 | opp_overlap 957004 957001, overlap 957018 AGGATGTCGATAAAG GCCGCGC GCT GCGCGCC TTTCTCGACGAGCCG Bphy_0858 956492 - 957241 + | HAD family hydrolase TERM 1070 957874 - 957860 - g 72 -8.5 -4.03234 | opp_overlap 957860 957859 CGGCTTCCAGACAAA GCCCG ATTTA CGGGC CTTCTGCGACTACAT Bphy_0859 957294 - 958730 + | alpha,alpha-trehalose-phosphate synthase (UDP-forming) TERM 1071 958758 - 958777 + T 100 -13.6 -5.4505 | opp_overlap 958758 ACGCCGATTAAAAAA GCCGCTTC GATC GAAGCGGC TTTTTTGTTGCGGCC TERM 1072 958777 - 958758 - T 100 -13.6 -5.14965 | opp_overlap 958758 ACGCCGATTAAAAAA GCCGCTTC GATC GAAGCGGC TTTTTTGTTGCGGCC Bphy_0860 960713 - 958821 - | ABC transporter related TERM 1073 959926 - 959937 + g 72 -7.2 -4.25104 | TCCGACTTCACGGTC GCGC TGAA GCGC TTTTGCTCGCGAAAC TERM 1074 960249 - 960263 + g 72 -2.8 -4.60487 | overlap 960247 AGTGATTCGGCTCGC CAGC GTGCCCG GCTG TTTTTCCGCGTAATA TERM 1075 960982 - 960994 + H 71 -6.9 -4.11216 | TCAGATGCTCGGACC GTCGG CAA CCGGC TTTTGGCGCTAGCGC TERM 1076 962427 - 962407 - g 77 -8.2 -4.2461 | ACGTCTACGAAGAAA TGCTGCGC GCGAA GCGCCGCA CGGTGCTGCGCGAAG Bphy_0861 961392 - 962456 + | glycosyl transferase group 1 TERM 1077 962505 - 962549 + F 100 -20.8 -3.53343 | overlap 962510 962513 GGTCTCTACGGATGT CGCCGCAACGCCCCGCATGT GTCCA ACATGCGGGGCGTTGTTGCA TTTGCGCCGCACCTT TERM 1078 962510 - 962544 + F 100 -24.5 -3.27525 | overlap 962505 962513 CTACGGATGTCGCCG CAACGCCCCGCATGT GTCCA ACATGCGGGGCGTTG TTGCATTTGCGCCGC TERM 1079 962513 - 962541 + F 100 -20.4 -3.77832 | overlap 962510 962505 CGGATGTCGCCGCAA CGCCCCGCATGT GTCCA ACATGCGGGGCG TTGTTGCATTTGCGC TERM 1080 962673 - 962648 - f 74 -14 -2.59668 | overlap 962647 962662 962663 TAATATCCCTATAAT GGCCGTGCCG CAAATC CGGCACAGCC GGTCGACATGAGGAG TERM 1081 962720 - 962745 + G 77 -12.5 -3.63694 | gap 1, opp_overlap 962715 962714 962710 CGAAACAGACGCGTG CGAGCGCGGCGC CCG GCGCCG-GCACG TTGTTCGCGCTGCGT TERM 1082 962941 - 962967 + G 71 -7.8 -4.10953 | overlap 962939 962946 TTTCATCCGCTTCCC CAGTGGCTGCGC CAG GCGCTGCGTCTG TTTGCTTTCCTGGGT Bphy_0862 962695 - 963552 + | hypothetical protein TERM 1083 963938 - 963976 + G 77 -12.6 -3.59979 | gap 2, opp_overlap 963960 963961, overlap 963938 963939 TGGTGTCGCTGATTC G--CTGGCGCATCGCCAT CAGGA ATGGCGATGCGCCGGATC TTTCGCGTGCGGGCC TERM 1084 963938 - 963974 + G 93 -18.8 -3.38046 | opp_overlap 963960 963961, overlap 963938 963939 TGGTGTCGCTGATTC GCTGGCGCATCGCCAT CAGGA ATGGCGATGCGCCGGA TCTTTCGCGTGCGGG TERM 1085 963939 - 963973 + G 100 -22.3 -2.62613 | opp_overlap 963960 963961, overlap 963938 963938 GGTGTCGCTGATTCG CTGGCGCATCGCCAT CAGGA ATGGCGATGCGCCGG ATCTTTCGCGTGCGG Bphy_0863 963631 - 964089 + | membrane protein-like protein Bphy_0864 966008 - 964140 - | hypothetical protein Bphy_0865 966394 - 966005 - | GtrA family protein TERM 1086 966317 - 966299 - G 81 -13.8 -3.45027 | overlap 966297 ACGGCCGACGAAATA GCCCGCGC CGA GCGCGAGC ATGCCGTACAGCACG Bphy_0866 967374 - 966391 - | glycosyl transferase family protein TERM 1087 967627 - 967604 - R 100 -15.2 -5.70761 | opp_overlap 967604 AAAACAAAAGAAAAA GGCCCGGGCG TTTC CGTCCGGGCC TTCTGTTCTTCGAAT TERM 1088 967604 - 967627 + r 100 -17.4 -3.8372 | opp_overlap 967604 AAAACAAAAGAAAAA GGCCCGGGCG TTTC CGTCCGGGCC TTCTGTTCTTCGAAT Bphy_0867 968517 - 967768 - | DNA polymerase III, epsilon subunit Bphy_0868 969032 - 968586 - | ribonuclease H Bphy_0869 969844 - 969029 - | methyltransferase type 11 Bphy_0870 969864 - 970667 + | hydroxyacylglutathione hydrolase Bphy_0871 970823 - 972508 + | lytic transglycosylase catalytic TERM 1089 972561 - 972539 - f 75 -9.9 -3.80573 | gap 1 TCGAGGATGACCAAA CACGCG-TGC GGGG GCATCGCGTG AAGTGCGCTCCGATC Bphy_0872 972757 - 974001 + | major facilitator transporter TERM 1090 974419 - 974465 + F 70 -3.7 -4.66987 | gap 2, opp_overlap 974419, overlap 974420 974422 ACGGTCGGATAGACA GGTCGGCAACA-GGGTG-CTC GCCCAAG GAGTCTCCCGTGTTGCCGTCA TTTTCTTCCGCTCTG TERM 1091 975399 - 975383 - g 76 -9.4 -4.10161 | GATCACGTCGCAAAA CCACGG TTTCG CCGTGG ACGCCGACACGCTGC Bphy_0873 974454 - 975608 + | carbamoyl-phosphate synthase, small subunit Bphy_0874 975730 - 978984 + | carbamoyl-phosphate synthase, large subunit Bphy_0875 979137 - 979613 + | transcription elongation factor GreA TERM 1092 979849 - 979885 + G 74 -13 -3.25896 | gap 1, opp_overlap 979852, overlap 979847 979873 979874 979877 CGGCGCGGCGGTAAT GCATACCGGCG-TCTGC GCTG GCTGATCGCCGGCATGC TGTTGTGCGTGCTGG Bphy_0876 979633 - 980133 + | hypothetical protein Bphy_0877 980851 - 980288 - | hypothetical protein TERM 1093 980491 - 980515 + g 81 -13.6 -3.53343 | gap 1 CTTCCTCTGCGGCTT CGCGG-GCGCT GGGG AGCGCGCCGCG TTTCGCGGCCGGCTT TERM 1094 980522 - 980540 + g 74 -13.1 -3.28001 | overlap 980517 CGCGCCGCGTTTCGC GGCCGGC TTCAC GCCGGCC TTGGCTTTAGCCGTG TERM 1095 980968 - 980958 - H 74 -6.8 -4.37092 | ACTGCGGTTAGAAAA CTGC GGG GCAG AAAATACTGCGTACT Bphy_0878 981120 - 981782 + | ribosomal RNA methyltransferase RrmJ/FtsJ Bphy_0879 981969 - 983858 + | ATP-dependent metalloprotease FtsH TERM 1096 983880 - 983907 + F 100 -22.8 -4.63479 | opp_overlap 983872 983871 GTTAAAGGTGTTTTA CGGGCCGGTGTG ATTT CACACCGGCCCG TTTTCATTTCTAATG Bphy_0880 984031 - 984873 + | dihydropteroate synthase TERM 1097 985585 - 985561 - g 77 -13.5 -3.36273 | CGGCTTTAACATCAA CGACGGCGTCG GCG CGACGGCGCCG GATGCGCTGGTGCGC Bphy_0881 984902 - 986260 + | phosphoglucosamine mutase TERM 1098 986347 - 986319 - f 71 -13.2 -2.61997 | opp_overlap 986324, overlap 986324 TTCCAGACAGAAGAC GAAAAGGGCGGC TTCAT GCCGCCCTTTTT TTATGCCGCGTACCA TERM 1099 986324 - 986342 + F 100 -13.1 -5.60993 | opp_overlap 986319 986324 GACAGAAGACGAAAA GGGCGGC TTCAT GCCGCCC TTTTTTTATGCCGCG TERM 1100 986342 - 986324 - f 100 -13.1 -4.48263 | opp_overlap 986324, overlap 986319 GACAGAAGACGAAAA GGGCGGC TTCAT GCCGCCC TTTTTTTATGCCGCG Bphy_0882 986616 - 987647 + | phosphate ABC transporter, periplasmic phosphate-binding protein TERM 1101 987695 - 987734 + F 86 -14.2 -3.29511 | gap 1, overlap 987699 TGACTTATTGGCTCG CGGCCGGCCGCCCGGCTTC GAT GAGGCCCGGCGGCCG-TAG TTCTGGCCGCGTGGC TERM 1102 987699 - 987731 + F 100 -22.7 -2.82742 | overlap 987695 TTATTGGCTCGCGGC CGGCCGCCCGGCTTC GAT GAGGCCCGGCGGCCG TAGTTCTGGCCGCGT Bphy_0883 987797 - 988795 + | phosphate ABC transporter, inner membrane subunit PstC Bphy_0884 988792 - 989688 + | phosphate ABC transporter, inner membrane subunit PstA TERM 1103 989743 - 989759 + G 86 -15.1 -3.53012 | opp_overlap 989724 AATCCCGTCGAGCGC CCGGCGG CAC CCGCCGG TTTCGACCCGGCGCA Bphy_0885 989704 - 990552 + | phosphate ABC transporter, ATPase subunit TERM 1104 990828 - 990801 - g 81 -17 -2.77701 | overlap 990796 AGTGCAGCAACATCA TCGCGCGTCGTC AGCC GACGGCGCGCGA CCTGCGCCTCGTGAT Bphy_0886 990587 - 991291 + | phosphate uptake regulator, PhoU Bphy_0887 991355 - 992056 + | two component transcriptional regulator TERM 1105 992116 - 992075 - f 100 -12.9 -4.69027 | opp_overlap 992077 992081, overlap 992077 AAACTGATCGAAAAA CACGAAGCGCGCTGCGGGC ACTC GGACGCAGCGCGCTTTGTT GTCTATGAAGTCTTC TERM 1106 992114 - 992077 - f 100 -15.5 -3.95214 | opp_overlap 992077 992081, overlap 992075 ACTGATCGAAAAACA CGAAGCGCGCTGCGGGC ACTC GGACGCAGCGCGCTTTG TTGTCTATGAAGTCT TERM 1107 992077 - 992114 + F 95 -17.7 -3.59966 | opp_overlap 992077 992075, overlap 992081 ACTGATCGAAAAACA CGAAGCGCGCTGCGGGC ACTC GGACGCAGCGCGCTTTG TTGTCTATGAAGTCT TERM 1108 992081 - 992110 + F 100 -14.9 -4.42974 | opp_overlap 992077 992075, overlap 992077 ATCGAAAAACACGAA GCGCGCTGCGGGC ACTC GGACGCAGCGCGC TTTGTTGTCTATGAA TERM 1109 992258 - 992241 - g 73 -5.5 -4.4261 | opp_overlap 992255, overlap 992235 992243 TCGTCAACACGAAAA CGGCG TTGGCGCT CGCCG TGCTCGCACTGCTCG Bphy_0888 992153 - 993466 + | multi-sensor signal transduction histidine kinase TERM 1110 993513 - 993524 + T 100 -7.2 -5.93252 | overlap 993480 993478 TTTTTGCCTGCGGCG CGGC GTTT GCCG TTTTTTGTTTTTCCG TERM 1111 993631 - 993618 - T 90 -4.5 -5.47218 | TGCCAGCGAAAAAAA CGACA CCAG CGTCG AGGACAAAGATCAAT Bphy_0889 995249 - 993642 - | Ppx/GppA phosphatase TERM 1112 997464 - 997481 + G 82 -5.5 -4.73613 | TCGCGGAATGCGCAG CTTAGCC TGTT GGCCAAG TTTTGTTCGTGATGG Bphy_0890 995430 - 997493 + | polyphosphate kinase TERM 1113 997565 - 997589 + T 78 -11.4 -3.75884 | overlap 997561 GTTTCTGGTTTGCTC GTGTTGCCCC TGTGC GGGGCGGCAC TTACTTTCTTTGCCG TERM 1114 997643 - 997625 - T 78 -6.6 -4.59212 | opp_overlap 997627, overlap 997627 AAGTAAGCAAAGAAA GCCGCTCA CAC CGAGCGTC TTGACGTTTACCCGC Bphy_0891 998787 - 997972 - | hypothetical protein TERM 1115 998017 - 998000 - G 72 -3.4 -4.63218 | gap 1, opp_overlap 998000 998004 GCGTCCCCAAGAAAA TGCCGCG CATAC CGCG-CA TTGATCTCCGACAAC Bphy_0892 999422 - 998964 - | putative phosphohistidine phosphatase, SixA TERM 1116 999598 - 999623 + r 100 -11.8 -4.96848 | opp_overlap 999598 GTGGAAAAACAAAAA CCCGCGACAC GCAAAG GTGACGCGGG TTTTTGTGTACGGCA TERM 1117 999623 - 999598 - R 100 -11.8 -5.61881 | opp_overlap 999598 GTGGAAAAACAAAAA CCCGCGACAC GCAAAG GTGACGCGGG TTTTTGTGTACGGCA Bphy_0893 999989 - 999831 - | hypothetical protein TERM 1118 1000263 - 1000288 + r 88 -15.5 -3.55444 | opp_overlap 1000252 1000222 GAAAGCCCACGCGCG CGAGCTTCGCC TTGC GGTGAAGCTCG TTTGGACAATCCGAA TERM 1119 1000325 - 1000306 - R 85 -15 -3.11291 | opp_overlap 1000306 1000318, overlap 1000298 TGGACAATCCGAATA TGCGCCGC GAGC GCGGCGCA TACGCATCAGTGTCT Bphy_0894 1000505 - 1000332 - | hypothetical protein Bphy_0895 1000673 - 1000846 + | lipoprotein Bphy_0896 1002254 - 1000872 - | MATE efflux family protein Bphy_0897 1002604 - 1002251 - | hypothetical protein TERM 1120 1002630 - 1002601 - G 81 -11.4 -4.05446 | opp_overlap 1002619 1002620 GGGCGTAACTATAAA CCATAGCCGACG GCGAGA CGTCGGCTGCGG GATCGCGGATCGACT TERM 1121 1002805 - 1002790 - R 85 -10.4 -4.2679 | opp_overlap 1002796 GAATCGCGACGAAAA GGTGCG TTGG CGCACC AAGTTTAATGATTGC TERM 1122 1003144 - 1003162 + r 100 -13.1 -5.626 | GCCGAACCCCCGTTT GCCCGGC CTCGT GCCGGGC TTTTTTTGTCCGCTC Bphy_0898 1003545 - 1003216 - | lipoprotein TERM 1123 1003503 - 1003481 - G 71 -13.5 -3.03124 | GCGCAGCCCGCAAGA CTCGCGATC CCAGC GATCGCGAG GCTCGCCGCCATCGC TERM 1124 1003614 - 1003595 - R 71 -10 -3.53012 | gap 1, opp_overlap 1003570 1003598 1003600, overlap 1003596 CGCGGTGCCGGTAAA CGCGGCACG GCG CGTGCC-CG CCCGTCTCTGTGATG Bphy_0899 1004456 - 1003734 - | peptidase M23B TERM 1125 1003822 - 1003837 + g 73 -6.1 -4.43189 | CGGTCGTTGTCCGAG TCGCC CATCTC GGCGA TTTTCTGACCTTGCT TERM 1126 1004424 - 1004440 + g 86 -2.9 -5.18726 | overlap 1004425 CGCGACCATCGCCCC GCAGACG AGC TGTCTGA TTTTTGTTGTCAACA Bphy_0900 1005490 - 1004573 - | aldose 1-epimerase TERM 1127 1005422 - 1005403 - G 77 -15 -2.78816 | opp_overlap 1005402 1005401, overlap 1005376 CGACGTCCCACGACA GCAGGCGG CCGC CCGCCTGC GGCGCGACGCGGAGC Bphy_0901 1005530 - 1005787 + | hypothetical protein TERM 1128 1005856 - 1005877 + F 100 -17.3 -5.01811 | CAGCCTCCGCACGCA GGCCCGCCT TCCA AGGCGGGCC TTTTTGCTTTCATGA TERM 1129 1006057 - 1006074 + G 81 -3.3 -5.02231 | TTCTTTCAAAAGGAC CGACGCG TGAG CCTGTCG TTTTTGATCTTTTTG TERM 1130 1006272 - 1006284 + G 70 -2.6 -4.62783 | overlap 1006271 1006270 TGCGCGCTGGATCGC GCTG ATAAG CGGC TTTTTCGCGTCGCTG Bphy_0902 1006000 - 1006893 + | undecaprenyl-diphosphatase TERM 1131 1006921 - 1006944 + T 81 -11.6 -3.82202 | opp_overlap 1006918, overlap 1006922 1006938 ATCGGTTATAATCCC GGGCCCGGCG TTGC TGCCGGGCCG TTCTGTTTGCGCATC TERM 1132 1006922 - 1006943 + T 84 -15.1 -2.88839 | opp_overlap 1006918, overlap 1006921 1006938 TCGGTTATAATCCCG GGCCCGGCG TTGC TGCCGGGCC GTTCTGTTTGCGCAT TERM 1133 1007232 - 1007215 - T 100 -12.7 -4.59376 | ATCAGCAAATGAAAA GGGCAGC CGAA GCTGCCC TGAAGCGTTGCGCAT Bphy_0903 1007610 - 1007365 - | hypothetical protein TERM 1134 1007444 - 1007410 - G 100 -13.6 -4.24745 | overlap 1007430 GATCAGCAACATAAA TGACGCGAGGAGGC AACTGAG GCCCGCTCGCGTCA GCACGCATGGCCAAC Bphy_0904 1007901 - 1008290 + | hypothetical protein TERM 1135 1008434 - 1008404 - g 80 -14.7 -3.15544 | GGGCAGGGTGAGGAA GGCGAAGCGCCGC AGGCG ACGGCGCTTCGCG AGATGGACGAGGAAA TERM 1136 1008474 - 1008491 + G 85 -4.8 -5.03994 | CGCTTGAGGCAGAGC GCCTGA AAGACC TCGGGC TTTTTGTATATCGAC Bphy_0905 1008287 - 1008745 + | NUDIX hydrolase Bphy_0906 1009685 - 1008771 - | extracellular solute-binding protein Bphy_0907 1011540 - 1009819 - | glutaminyl-tRNA synthetase Bphy_0908 1011949 - 1011596 - | hypothetical protein Bphy_0909 1012106 - 1012933 + | ECF subfamily RNA polymerase sigma-24 factor TERM 1137 1013362 - 1013380 + G 70 -8.1 -4.053 | gap 1 CGAGCGCGGTCTGGC GCG-GCGC TCTC GCGCTCGC TTTCTGTGCGCTGGT Bphy_0910 1012923 - 1013891 + | putative transmembrane anti-sigma factor TERM 1138 1013980 - 1013922 - f 88 -16.9 -2.87931 | gap 2, opp_overlap 1013929 1013936 GCGACGGGCGATAGA GGGACGATTTAGGGGCGGCCGGGGCGC TTGCTGG GCGCCGCGGCCGCCCCTAAATCATT-- GAAAACACGCCCGAA TERM 1139 1013929 - 1013975 + F 100 -31 -2.70932 | opp_overlap 1013922, overlap 1013936 GCGATAGAGGGACGA TTTAGGGGCGGCCGGGGCGCTT GCT GGGCGCCGCGGCCGCCCCTAAA TCATTGAAAACACGC TERM 1140 1014004 - 1014014 + F 71 -6.8 -4.1891 | opp_overlap 1013989 GCCCGAATCGCGTCC GCAC TTC GTGC TTTATCTTGCAAACA TERM 1141 1014409 - 1014396 - g 73 -9.5 -3.82084 | overlap 1014404 1014405 CGTCAAGATGAAGAA GGCCG AAAC CGGCC CGTCGCCGATGATGA TERM 1142 1014472 - 1014454 - g 86 -10.2 -4.29073 | overlap 1014455 GAAGAAGCCAAGAAA GCGGCTGC AGC GCAGCCGA CGGAAGCGCAGGCTT TERM 1143 1014471 - 1014455 - g 76 -13.7 -3.16359 | overlap 1014454 AAGAAGCCAAGAAAG CGGCTGC AGC GCAGCCG ACGGAAGCGCAGGCT Bphy_0911 1014115 - 1014489 + | ribosomal protein S6 Bphy_0912 1014555 - 1014854 + | putative primosomal replication protein N, PriB TERM 1144 1014925 - 1014907 - g 72 -3 -4.71426 | overlap 1014909 TCGTCAGCAACAAAA CCCGCTCT TCA AGCGCAAG AAGTTCTGCCGCTTC Bphy_0913 1014857 - 1015132 + | ribosomal protein S18 TERM 1145 1015276 - 1015264 - g 91 -6.9 -5.07486 | GATCCCGAACAAAAA GGCAC GAC GCGCC ACGAAGGAAGCCATC Bphy_0914 1015160 - 1015612 + | ribosomal protein L9 TERM 1146 1015691 - 1015662 - f 85 -14.9 -3.14132 | opp_overlap 1015663 GGTTCTGGCGATGAA GGGCAGGGGCCGG GAAA CCGGCCTCTGCCT TTTTTGTTCTGCGCC TERM 1147 1015663 - 1015690 + F 100 -20.6 -5.55769 | opp_overlap 1015662 GTTCTGGCGATGAAG GGCAGGGGCCGG GAAA CCGGCCTCTGCC TTTTTTGTTCTGCGC Bphy_0915 1015784 - 1017172 + | replicative DNA helicase TERM 1148 1017242 - 1017231 - f 76 -7.2 -4.42386 | overlap 1017233 CGCGCACGCACAAAA CGCG GGCG CGCG CGTCACCCGGAACGG Bphy_0916 1017321 - 1017947 + | hypothetical protein TERM 1149 1018919 - 1018948 + G 78 -13.5 -3.51232 | gap 1, overlap 1018925 GCATCCGCCGTATTA GCGGCGGCCG-GCT GGT GGCTCGGCCACCGC TTCCTTTAAGCCGCG Bphy_0917 1017947 - 1018957 + | phosphate transporter TERM 1150 1018996 - 1018969 - T 87 -16.3 -2.88579 | overlap 1018988 TTAAGCCGCGATACA GCACGCCGCCG TCAGAT CAGCGGCGTGC TGCCTCCATCCATCG Bphy_0918 1019786 - 1018980 - | short-chain dehydrogenase/reductase SDR TERM 1151 1019074 - 1019060 - G 75 -3.4 -4.83615 | opp_overlap 1019039 1019036, overlap 1019061 GACTCGCCAGAAAAA GCGCGA CGT CCGCGA TTTCCTCCGGTTTCG TERM 1152 1019501 - 1019515 + g 72 -12.8 -3.14229 | overlap 1019500 CGGGATCGTAGCGAC GCGCGG CGC CCGCGC TGTTGATGAGGATGT Bphy_0919 1021076 - 1019928 - | NLP/P60 protein TERM 1153 1021303 - 1021277 - R 100 -15.8 -4.72272 | GGCGCGCATGAAAAA GCCGCTGCCGGC GTC ACCGGAAGCGGC CTGGAACAGCGCAAA Bphy_0920 1023147 - 1021327 - | PhoH family protein TERM 1154 1023363 - 1023334 - R 100 -19.3 -5.26875 | gap 1, opp_overlap 1023329 CGCGCAATTAAAAAA GCCGC-CGCCCCGG CAA CCGGGGCAAGCGGC TCGACTTCGGTCATC Bphy_0921 1023974 - 1023513 - | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen TERM 1155 1023996 - 1024028 + r 100 -11.2 -5.08088 | gap 1, overlap 1024022 CTCCGGTTGTTATGG GTGCCGGCG-GCGGC GTGG GCCGCGCGCCTGAAC TTTTTCTTCGGGGTT Bphy_0922 1025097 - 1024201 - | polysaccharide deacetylase Bphy_0923 1026156 - 1025110 - | NAD-dependent epimerase/dehydratase TERM 1156 1026038 - 1026050 + g 71 -9.1 -3.71873 | TGTTTCACGAGGTCG CCGAG GCG CTCGG TTTGCATGTCCATCC Bphy_0924 1027088 - 1026153 - | formyl transferase domain-containing protein Bphy_0925 1028134 - 1027085 - | glycosyl transferase family protein Bphy_0926 1029304 - 1028153 - | DegT/DnrJ/EryC1/StrS aminotransferase Bphy_0927 1029986 - 1029561 - | hypothetical protein Bphy_0928 1031763 - 1029961 - | glycosyl transferase family protein TERM 1157 1030846 - 1030829 - G 70 -7.7 -3.96696 | AACAGGAAGATGAAA GCTGTCC ACAC GAACAGC AGCGTGACGGGCGCG TERM 1158 1030874 - 1030903 + g 71 -14.3 -2.73124 | gap 1, overlap 1030875 GCGAAGCCGTTCGCC TGACGCGGCATGCG CAG CGCGTGCCGCG-CG CTTTGCACCGTCACC TERM 1159 1030875 - 1030904 + g 75 -12.1 -3.55444 | gap 1, overlap 1030874 CGAAGCCGTTCGCCT G-ACGCGGCATGCG CAG CGCGTGCCGCGCGC TTTGCACCGTCACCG TERM 1160 1031783 - 1031802 + r 70 -4.8 -4.4846 | overlap 1031786 GTTTCAACCTTTTTC GACGCCGC TGTC GCGGCTAC TTTCTTATTCCGTTC TERM 1161 1031983 - 1032003 + r 83 -14 -3.33696 | CCTTAGGGCGATCAT GGCTGCGG GCTGG CCGCAGCC TTCATTCGCCGGCAC Bphy_0929 1032562 - 1032158 - | hypothetical protein Bphy_0930 1033030 - 1034277 + | aminotransferase class I and II Bphy_0931 1034336 - 1035667 + | homoserine dehydrogenase TERM 1162 1036585 - 1036567 - g 81 -11 -4.18018 | CTTGCCGATTGAAAA GCTGGTCG TCG CGACCAAC GAGAACGACGTGCTC Bphy_0932 1035698 - 1037146 + | threonine synthase TERM 1163 1037154 - 1037170 + F 87 -7.9 -4.86862 | overlap 1037156 1037157 CGCGTTGATTTTTGT CTGCGAC GCG GTCGCCG TTTTGGTTTTTTGCG TERM 1164 1037300 - 1037285 - f 87 -8.2 -4.7373 | overlap 1037286 GGATGCCAGCAAAAA CCGCCG CTGC CGGCGA AGACACAAAAACGAG TERM 1165 1037342 - 1037312 - f 100 -10.2 -5.10064 | overlap 1037317 1037319 GCGAAGACACAAAAA CGAGAGACCGCGCG CAC CGCGCAGGCGCACG AAAACCCGAAACCGC TERM 1166 1037981 - 1038003 + G 71 -4 -4.56597 | opp_overlap 1037995, overlap 1037983 CACATCTCGAAGTCG TGCGGCGGGT GAA AGTCGCCGTG TTTTTCACGGGCGAC TERM 1167 1038405 - 1038423 + G 72 -8.8 -4.07455 | overlap 1038389 TCTGCCGGGCAACCC CGTGTCGA CGT TCGTCACG TTTCTGCTGTTCGTG Bphy_0933 1037419 - 1038714 + | molybdenum cofactor synthesis domain-containing protein TERM 1168 1038997 - 1039008 + G 81 -3.6 -5.0133 | overlap 1038993 CGTATCACCGACGGC TGCG AAGT CGCG TTTTTTCCGCCCGTG Bphy_0934 1038778 - 1039035 + | molybdopterin converting factor, subunit 1 Bphy_0935 1039068 - 1039544 + | molybdopterin biosynthesis MoaE protein TERM 1169 1039574 - 1039546 - T 84 -12.7 -3.74747 | CGAAGGCGGATTAAA GTTATTCGTTGAA CGC TTCAACAAATAAC GGCGGCTCTATTATC Bphy_0936 1040210 - 1039653 - | globin TERM 1170 1040803 - 1040813 + G 77 -4.6 -4.66609 | opp_overlap 1040788, overlap 1040769 1040796 GCATCCTCGAATCGG CGCG CGA TGCG TTTTTCCGTGAACTC Bphy_0937 1040418 - 1040945 + | transcriptional regulator, TrmB TERM 1171 1042631 - 1042602 - g 76 -9.2 -4.16842 | overlap 1042603 1042621 CGGACCTGGAAGAAA TCTGGACGGCGG AAAAAG CCGCCGTGCAGG GCAGTGCGCAGCTGA TERM 1172 1042630 - 1042603 - g 72 -12.7 -3.09784 | overlap 1042602 1042621 GGACCTGGAAGAAAT CTGGACGGCGG AAAAAG CCGCCGTGCAG GGCAGTGCGCAGCTG Bphy_0938 1041221 - 1043818 + | ATP-dependent chaperone ClpB TERM 1173 1043904 - 1043871 - T 85 -15.5 -3.14848 | opp_overlap 1043876, overlap 1043876 GTTCCGGATGAAAAG CAAAAGGGCAACGAA GCGA TTCGTTGCCCTTTTT TTCACGCACGGCGTT TERM 1174 1043876 - 1043899 + T 100 -15.4 -5.40072 | opp_overlap 1043871 1043876 GGATGAAAAGCAAAA GGGCAACGAA GCGA TTCGTTGCCC TTTTTTTCACGCACG TERM 1175 1043899 - 1043876 - T 100 -15.4 -4.70319 | opp_overlap 1043876, overlap 1043871 GGATGAAAAGCAAAA GGGCAACGAA GCGA TTCGTTGCCC TTTTTTTCACGCACG TERM 1176 1044033 - 1043980 - T 71 -10.1 -3.53012 | gap 1, overlap 1043982 1043983 GTTCTTGTTGCCAAA CATGCCCGCGATCTGTCCGAGCGCGC CCA GCGCAC-CGGACAGGCCGCCTGCGTC GACCTGCCCATTGGC TERM 1177 1044031 - 1043982 - T 79 -12.7 -3.34398 | gap 1, overlap 1043980 1043983 TCTTGTTGCCAAACA TGCCCGCGATCTGTCCGAGCGCGC CCA GCGCAC-CGGACAGGCCGCCTGCG TCGACCTGCCCATTG TERM 1178 1044030 - 1043983 - T 84 -16.2 -2.60496 | gap 1, overlap 1043982 1043980 CTTGTTGCCAAACAT GCCCGCGATCTGTCCGAGCGCGC CCA GCGCAC-CGGACAGGCCGCCTGC GTCGACCTGCCCATT Bphy_0939 1044402 - 1043959 - | hypothetical protein TERM 1179 1044482 - 1044464 - R 93 -13.8 -3.93288 | overlap 1044465 CGGCAGGGAACGAAA CGCCGCGC GAA GCGCGGCA CCGATGATCGTGAGG TERM 1180 1044481 - 1044465 - R 84 -15.1 -2.95652 | overlap 1044464 GGCAGGGAACGAAAC GCCGCGC GAA GCGCGGC ACCGATGATCGTGAG Bphy_0940 1045094 - 1044534 - | putative DNA uptake protein, ComEA-like protein TERM 1181 1044637 - 1044670 + g 70 -11.7 -3.42069 | gap 1, overlap 1044635 1044643 1044644 GATGGCGCAGTAGCA GCGGGCGCCGATGCGG CAG CCGCGTCGGT-CTTGC TCTTCTTGGACTTCG TERM 1182 1044643 - 1044666 + g 72 -11 -3.46509 | gap 1, overlap 1044637 1044635 1044644 GCAGTAGCAGCGGGC G-CCGATGCGG CAG CCGCGTCGGTC TTGCTCTTCTTGGAC TERM 1183 1044644 - 1044664 + g 83 -14.7 -3.29958 | overlap 1044643 1044637 1044635 CAGTAGCAGCGGGCG CCGATGCGG CAG CCGCGTCGG TCTTGCTCTTCTTGG TERM 1184 1044697 - 1044744 + g 77 -8.4 -4.2231 | gap 1, overlap 1044692 TTCGATGCTTTCGCG CCCGATGC-GGCGTCGGCGGA TGTGGTT TGCGTCGTCGTTTGCATCGGG TTTTGCGTCGTGGTT Bphy_0941 1047677 - 1045320 - | penicillin-binding protein 1C TERM 1185 1046061 - 1046049 - G 80 -4.7 -4.83615 | CACTGCCGAGAAAAA GCGCG TCG CGAGC GGGCTGTCGAAGCCG TERM 1186 1047615 - 1047590 - G 76 -6.1 -4.51238 | gap 1, overlap 1047593 CCCATAAAATACAAA GCACGATGCGCA CGA TGCGCA-CGAAC GCAACGAACCCGCGC Bphy_0942 1053754 - 1047692 - | alpha-2-macroglobulin domain-containing protein TERM 1187 1049237 - 1049257 + g 76 -13.9 -3.06183 | opp_overlap 1049230 CAACGATACCGCGAT GCCGCCGCG CAG CGCGCCGGC TTGCGTCGCGGTCGC TERM 1188 1049358 - 1049374 + g 77 -12.3 -3.66999 | ATGGGGATGGCGGCC GTCACGC GTT GCGTGAC TTTGAGTGCGTCGCT TERM 1189 1049481 - 1049520 + g 88 -14.2 -3.85698 | gap 1, overlap 1049483 GGCGGCGCGACGTTC CAGGCGACTTCGCGTGCCG AAT CGGC-CGCGACGTCGACCG TTTGTGCCGGCAGCG TERM 1190 1049483 - 1049519 + g 77 -15.2 -2.91276 | overlap 1049481 CGGCGCGACGTTCCA GG-CGACTTCGCGTGCCG AAT CGGC-CGCGACGTCGACC GTTTGTGCCGGCAGC TERM 1191 1051076 - 1051099 + g 75 -12.4 -3.44325 | CGTGAGGCTGCCCGC GCCGTTGCGC TCGA GCGTGACGGC TTCCTTGTCGGCGAT TERM 1192 1052065 - 1052085 + g 71 -12.6 -3.23572 | overlap 1052063 GCTGGCCCTTGTCGA GCGTCGTG ACCCA CACGACGC TGTTCTCGCGTCCCT TERM 1193 1053175 - 1053200 + g 74 -5.3 -4.57073 | overlap 1053176 1053177 GCAGACGCTTCAGCA GTTCGGTGCGC GTTT GCGCATCGACG TTTTTCACGGGAATG TERM 1194 1053706 - 1053692 - G 75 -3.4 -4.72986 | opp_overlap 1053698, overlap 1053694 GAGCGTGATGAAAAA GCCGAG TAT CGCAGC CGCTGCGGCTGCCGC TERM 1195 1054111 - 1054092 - g 72 -11.4 -3.53811 | GTGATGCGCCTGAAA GCGACGGG GATG CCCATCGC GGGCATGCAAGCGTT Bphy_0943 1053918 - 1054334 + | MerR family transcriptional regulator Bphy_0944 1054331 - 1054729 + | carboxymuconolactone decarboxylase TERM 1196 1054861 - 1054871 + T 72 -4.6 -4.66833 | opp_overlap 1054852, overlap 1054860 AAGTGAGAGAGCCTC GTGG ATC CCGC TTTTTCCGCTTGCGC TERM 1197 1054879 - 1054893 + T 72 -5.6 -4.49958 | overlap 1054877 1054876 GATCCCGCTTTTTCC GCTTGC GCG GCGGGC TTTCTTTGCTGGCAT Bphy_0945 1056375 - 1055014 - | MATE efflux family protein Bphy_0946 1058135 - 1056378 - | putative inner membrane protein TERM 1198 1058344 - 1058361 + r 100 -12.7 -4.68994 | opp_overlap 1058344 TCCGCCGACAAAAAA GGGCAGC TCGC GCTGCCC TTTTTGCATCGTAAT TERM 1199 1058361 - 1058344 - R 100 -12.7 -5.24129 | opp_overlap 1058344 TCCGCCGACAAAAAA GGGCAGC TCGC GCTGCCC TTTTTGCATCGTAAT Bphy_0947 1058673 - 1058410 - | ribosomal protein L31 Bphy_0948 1059686 - 1058844 - | hypothetical protein TERM 1200 1059849 - 1059820 - R 100 -15.1 -4.09864 | opp_overlap 1059826, overlap 1059826 ACGCAGCGCGTAAAA GAAAAACGCCTGC GCAG GCAGGCGTTTTGC GGATGAAACGTAGGG TERM 1201 1059826 - 1059843 + r 93 -12.7 -4.11216 | opp_overlap 1059826 1059820 CGCGTAAAAGAAAAA CGCCTGC GCAG GCAGGCG TTTTGCGGATGAAAC TERM 1202 1059843 - 1059826 - R 100 -12.7 -5.45802 | opp_overlap 1059826, overlap 1059820 CGCGTAAAAGAAAAA CGCCTGC GCAG GCAGGCG TTTTGCGGATGAAAC Bphy_0949 1061132 - 1059870 - | transcription termination factor Rho TERM 1203 1060376 - 1060386 + g 72 -8.2 -4.18762 | TCTTCATTTCGACGA GGCG TTT CGCC TTTTCGATCACCATT TERM 1204 1061211 - 1061223 + r 78 -7.7 -4.49337 | GCTCAAGGACATACT CGTCT TTT AGACG TTTTATGGATTCTAG TERM 1205 1061272 - 1061256 - R 71 -7.2 -4.17657 | opp_overlap 1061256 1061262 TAGCACACGCCAAAA CCAGCC TGCGC GGCCGG TTCGTGTCGGCGCAT Bphy_0950 1061747 - 1061421 - | thioredoxin TERM 1206 1063064 - 1063045 - g 75 -4.3 -4.63218 | gap 1, overlap 1063047 1063048 1063058 TCTCGGCGAAGAAAA CATTGCGC ATGAA GCGCAA-G CGCTGCGCCTGCTCG TERM 1207 1064208 - 1064163 - g 77 -10.9 -3.78775 | gap 1, opp_overlap 1064176 CTGCGCAGCAGGAAA GCGCCGCGCG-CGCGCCGACGC CTC GCGCCGCAGAGCCGCAGGGCGC GTCGGCTGTTCCGCC TERM 1208 1064759 - 1064792 + G 76 -13.9 -3.17212 | gap 1 GTGCAGTCCCTGATC CGCGAGTTCGGCGCGA GCA TCGTGCCGGGCTC-CG TTCGTCCGCTGATGC Bphy_0951 1062461 - 1064842 + | DNA polymerase III, subunits gamma and tau Bphy_0952 1064920 - 1065246 + | hypothetical protein TERM 1209 1065255 - 1065298 + F 82 -13.3 -3.21099 | gap 2 GTTTTAATCGCGCAG CGTTGTGACGCGCGGTGCATG ACTG CATGC-CCGCGCGTTG-GACG TTCATCGTCGAACGG TERM 1210 1065536 - 1065505 - g 71 -8 -4.09739 | GGAAGGCGCGGAAAA GCTCGGCCGC TCGCTGCTGTTC GCGACCGAGC ATCTGCAGCACTGCG Bphy_0953 1065380 - 1065976 + | recombination protein RecR TERM 1211 1066160 - 1066180 + G 79 -11.1 -3.86822 | CTCGGCACGCTGATC GCGGGCC CGTTCGC GGCCCGC TTTCTCGGCGAGTTC Bphy_0954 1066040 - 1067305 + | L-carnitine dehydratase/bile acid-inducible protein F Bphy_0955 1067389 - 1068426 + | NMT1/THI5-like domain-containing protein TERM 1212 1069022 - 1069012 - g 72 -6.8 -4.21275 | opp_overlap 1069011 CCAACTGATGGAAAA CGAG CTG CTCG ATCTGTGGGCGGCGA Bphy_0956 1068473 - 1069297 + | ABC transporter related Bphy_0957 1069299 - 1070123 + | binding-protein-dependent transport systems inner membrane component TERM 1213 1070178 - 1070148 - T 100 -24.8 -4.15222 | opp_overlap 1070148 ATGGCGGGTAACAAA CGGCGCGTGGCCTC GCT AAGGCCACGCGCCG TTTTGCTTTTCGGGG TERM 1214 1070148 - 1070178 + T 100 -24.1 -4.67038 | opp_overlap 1070148 ATGGCGGGTAACAAA CGGCGCGTGGCCT CGCTA AGGCCACGCGCCG TTTTGCTTTTCGGGG Bphy_0958 1071179 - 1070205 - | alcohol dehydrogenase TERM 1215 1071226 - 1071244 + H 84 -13.2 -3.70902 | ACATCACGGGTTCAT GCACGCTT CAC AAGCGTGC TTTCGATCTGCAGGC Bphy_0959 1071447 - 1072205 + | stationary-phase survival protein SurE TERM 1216 1072386 - 1072328 - g 71 -9.4 -3.70902 | gap 1, opp_overlap 1072298, overlap 1072329 CCGGTCACATCGAAA CCGGCCGGTTCGTCCACGCGGGCG-CC TGTCGT GGTCACACCCGTGGTCAAACCGGTCGT CAAAAGCGCCGTTAC TERM 1217 1072457 - 1072408 - g 88 -2.3 -5.24129 | gap 3, overlap 1072434 1072456 CGCCGTTACAAAAAA CG-CGTC-CGGAATCGTCAATACG AAAAG CGCATCCACGAT-CCGCAACGACG GCGCGCGCAACCAGT TERM 1218 1072450 - 1072434 - g 75 -6.5 -4.4261 | overlap 1072408 TCGTCAATACGAAAA GCGCATC CAC GATCCGC AACGACGGCGCGCGC TERM 1219 1073136 - 1073150 + G 85 -4.9 -4.99645 | overlap 1073127 CGCAGTGGCGCGAAT CGCGG CTTGA TCGCG TTTTCTTTGTCCCCT Bphy_0960 1072202 - 1073185 + | protein-L-isoaspartate O-methyltransferase TERM 1220 1074041 - 1074026 - g 70 -4.7 -4.4017 | CCAAGGGGCAGAAAA TTGCC GAAATG GGCAA CAGTGATTCGGACCG Bphy_0961 1073191 - 1074129 + | peptidase M23B TERM 1221 1074308 - 1074277 - g 80 -14.4 -3.42013 | gap 1, overlap 1074271 1074263 ACTCGACAACAGCAA CGACGCCG-ACGAGC GCG GCTCGCGCGGCGACG AGGAACCGGATTCGC Bphy_0962 1074146 - 1075240 + | RNA polymerase, sigma 38 subunit, RpoS TERM 1222 1075359 - 1075389 + G 73 -6 -4.37886 | opp_overlap 1075343 1075344 1075378 TGGCCGAGCACGCGT TCGCGGCTCGGC GCGAGAA GACGGGCAGCGA TTTTCTGCCGCATCA Bphy_0963 1075247 - 1076023 + | 3'-5' exonuclease TERM 1223 1076191 - 1076160 - T 93 -5.2 -5.36441 | gap 1 GTCGCAGACAAAAAA CATCAACCGATC-TC GAC GATGACAGGCTGATG ATCCGAAGCCCGCGT Bphy_0964 1077025 - 1076162 - | endonuclease/exonuclease/phosphatase TERM 1224 1077166 - 1077140 - g 79 -10.1 -4.13014 | overlap 1077157 1077162 CCCACATTGGTAAAA CCCGCTCGCCC AGAAA AGGCAAGCAGG CGCGCGAAGACGCCG TERM 1225 1077187 - 1077157 - g 70 -4.6 -4.36914 | gap 1, overlap 1077140 1077162 CGCTCGCCCAGAAAA GGCAAGCAGGCGC GCGAAG ACGCC-GCCGGCC CGTTCAAGGCGCCCG Bphy_0965 1077109 - 1078530 + | RNA methyltransferase TERM 1226 1078618 - 1078585 - T 100 -24.1 -3.53091 | opp_overlap 1078585 1078588 1078591, overlap 1078588 1078591 AGCGGGCGCCGCAAA GAACAACGCCACGGT CGGC ACCGTGGCGTTGTTC TTTGATGAAGAGCGA TERM 1227 1078585 - 1078618 + T 100 -24.1 -3.72576 | opp_overlap 1078585 1078588 1078591, overlap 1078588 1078591 AGCGGGCGCCGCAAA GAACAACGCCACGGT CGGC ACCGTGGCGTTGTTC TTTGATGAAGAGCGA TERM 1228 1078588 - 1078615 + T 100 -20 -4.00042 | opp_overlap 1078585 1078588 1078591, overlap 1078585 1078591 GGGCGCCGCAAAGAA CAACGCCACGGT CGGC ACCGTGGCGTTG TTCTTTGATGAAGAG TERM 1229 1078615 - 1078588 - T 100 -20 -3.90744 | opp_overlap 1078588 1078585 1078591, overlap 1078585 1078591 GGGCGCCGCAAAGAA CAACGCCACGGT CGGC ACCGTGGCGTTG TTCTTTGATGAAGAG TERM 1230 1078591 - 1078612 + T 100 -15.9 -4.12603 | opp_overlap 1078588 1078585 1078591, overlap 1078588 1078585 CGCCGCAAAGAACAA CGCCACGGT CGGC ACCGTGGCG TTGTTCTTTGATGAA TERM 1231 1078612 - 1078591 - T 100 -15.9 -4.08557 | opp_overlap 1078591 1078588 1078585, overlap 1078588 1078585 CGCCGCAAAGAACAA CGCCACGGT CGGC ACCGTGGCG TTGTTCTTTGATGAA Bphy_0966 1079499 - 1078642 - | putative competence lipoprotein, ComL TERM 1232 1079349 - 1079363 + g 81 -3.4 -5.00616 | overlap 1079341 1079350 TATTGTTGGTCCAGG TGGCCG TTT CGTCCG TTTTTTCCGGCAGGC Bphy_0967 1079539 - 1080849 + | RluA family pseudouridine synthase TERM 1233 1081531 - 1081543 + G 70 -4.7 -4.4261 | ACCTCGCCGATCTGC CGCGC CTC GCACG TTTTCGTCTTGCGCA Bphy_0968 1080846 - 1081685 + | hypothetical protein TERM 1234 1081968 - 1081954 - f 89 -2 -5.68023 | overlap 1081956 CGATAATGAAAAAAA TATCGC ACT GCGGCA AAATCGGGAGCAAGC Bphy_0969 1082120 - 1084108 + | poly(R)-hydroxyalkanoic acid synthase, class I Bphy_0970 1084301 - 1085482 + | acetyl-CoA acetyltransferase TERM 1235 1086271 - 1086260 - g 82 -4.4 -5.00884 | overlap 1086261 ACGTGCTGGAAAAAA TCGT CGCG ACGA TTCCGGTGCGCCGTC Bphy_0971 1085656 - 1086396 + | acetoacetyl-CoA reductase TERM 1236 1086461 - 1086511 + F 100 -16.1 -3.93638 | opp_overlap 1086507, overlap 1086462 1086507 TGGTTCAGATGTTTC TGGCGGCGTCTTGCACGCGCAGC GTCAA GCTGTGCGTGCGACAGGACGCCG TTTCTGCGCTTCATT TERM 1237 1086462 - 1086510 + F 90 -17.4 -2.95459 | opp_overlap 1086507, overlap 1086461 1086507 GGTTCAGATGTTTCT GGCGGCGTCTTGCACGCGCAGC GTCAA GCTGTGCGTGCGACAGGACGCC GTTTCTGCGCTTCAT Bphy_0972 1086545 - 1087123 + | polyhydroxyalkonate synthesis repressor, PhaR Bphy_0973 1087506 - 1088897 + | MiaB-like tRNA modifying enzyme YliG Bphy_0974 1088902 - 1089840 + | ribokinase-like domain-containing protein TERM 1238 1089981 - 1089950 - f 86 -14.4 -3.28497 | overlap 1089945 1089952 GTAGTGCAAAGGCAA GATCACACGCGGCG GCAA CGCCGCGCGCGATA TCCAACTGAGACAAA TERM 1239 1089979 - 1089952 - f 90 -17 -3.20617 | overlap 1089950 1089945 AGTGCAAAGGCAAGA TCACACGCGGCG GCAA CGCCGCGCGCGA TATCCAACTGAGACA TERM 1240 1090534 - 1090503 - g 79 -10.2 -4.09685 | gap 1, overlap 1090515 1090518 1090523 CGTGACGGCCGAAAA CGTCGCG-AAGAAGT ACG ACATCTCGCGCGACG CGCAAGACGCACTCG TERM 1241 1090833 - 1090815 - g 71 -7.3 -4.07885 | overlap 1090827 CAGCGTCGCCGAAAA GCGCGGC ATGAA GCCGCTC GGCAGGCTGGTCGCT Bphy_0975 1090012 - 1091196 + | acetyl-CoA acetyltransferase Bphy_0976 1091352 - 1091960 + | hypothetical protein TERM 1242 1092069 - 1092081 + G 71 -4.1 -4.53303 | CGATCAGATGACACC CGGTT GGG AATCG TTTTCTGTGCCCGTG Bphy_0977 1092001 - 1093185 + | cystathionine beta-lyase TERM 1243 1093219 - 1093240 + T 100 -17.3 -4.64766 | opp_overlap 1093219 AAGCACGAACAACAA GCCCGCTCG ATAT CGAGCGGGC TTTTTCACCTGTGCC TERM 1244 1093240 - 1093219 - T 100 -17.3 -4.01047 | opp_overlap 1093219 AAGCACGAACAACAA GCCCGCTCG ATAT CGAGCGGGC TTTTTCACCTGTGCC Bphy_0978 1094112 - 1093273 - | phosphoserine phosphatase SerB TERM 1245 1095385 - 1095429 + G 77 -11.4 -3.70149 | gap 1 GCGGGTCTGTCGCTT GCGCGGCTCGAAGCG-CGGAT TGCA ATCGGGCGTTTCGTGCGGCGC TTTCCGTCATATCGG Bphy_0979 1094296 - 1095519 + | cytochrome P450 TERM 1246 1095536 - 1095552 + F 72 -4.4 -4.56597 | gap 1, opp_overlap 1095523, overlap 1095531 1095525 AGCGTACGAACGCAT GCT-CGG GCGT CCGTAGC TTTTTCCGCAGAGAA TERM 1247 1095608 - 1095652 + F 75 -12.2 -3.27774 | opp_overlap 1095573 GCGCTGCCGCACACC GCATGCGCGA-CGTGCGTGGCG ACG CGCCACG-ACGCTTGGGCACGC TTGGTGCTTCGCATG TERM 1248 1096601 - 1096570 - g 75 -12.3 -3.53012 | overlap 1096591 1096595 GCCGCGCCCGCGAAA CGTCGCGCGGC AGCGAAGAAA GCCACGCGACG CACGACCGGGACGGC Bphy_0980 1095703 - 1096677 + | Ku protein Bphy_0981 1096745 - 1099609 + | DNA ligase D Bphy_0982 1099684 - 1099998 + | hypothetical protein Bphy_0983 1100990 - 1100016 - | LysR family transcriptional regulator Bphy_0984 1101155 - 1102171 + | zinc-binding alcohol dehydrogenase family protein TERM 1249 1102307 - 1102290 - f 77 -2.7 -5.15167 | gap 1, overlap 1102305 1102306 CATCAGGAAGAAAAA CCGCTGTG AGG CA-AACGG CGCGATCGGCGACAA TERM 1250 1102621 - 1102601 - g 71 -8.1 -4.11394 | ACTTCACGTGGAAAA CCGTGCCGC CCG GCGGCCCCG TCGCCGTCGACAGCG Bphy_0985 1102369 - 1102929 + | hypothetical protein Bphy_0986 1103822 - 1103016 - | hypothetical protein Bphy_0987 1104559 - 1103819 - | ABC transporter related TERM 1251 1104194 - 1104138 - G 75 -6.5 -4.43501 | gap 3, overlap 1104139 1104191 AATCGATCGAGAAAA TCGCTT-GAGCG-GCCCGC-CTGCGACG CGAG CGCCGCCGCGCGCGCGCGATCGAAGCGC ACGTCGCGATACGCA TERM 1252 1106046 - 1106030 - g 100 -11.5 -5.1356 | CGCGAGCAAGAAAAA GCGCGGC GAC ACCGCGC GCCAGCCATCGAACA Bphy_0988 1104678 - 1107110 + | AsmA family protein TERM 1253 1107211 - 1107180 - T 100 -22.4 -4.08692 | gap 1, opp_overlap 1107181, overlap 1107181 GAACCGCCCGCAAAA GCGCCACGGCCGCGA ATC TCGCGGCCGTGGC-C GTGTCTCTGCGTGAA TERM 1254 1107181 - 1107212 + T 100 -22.4 -3.0094 | gap 1, opp_overlap 1107180 1107181 AACCGCCCGCAAAAG C-GCCACGGCCGCGA ATC TCGCGGCCGTGGCCG TGTCTCTGCGTGAAC TERM 1255 1107211 - 1107181 - T 100 -22.6 -3.04894 | opp_overlap 1107181, overlap 1107180 AACCGCCCGCAAAAG CGCCACGGCCGCGA ATC TCGCGGCCGTGGCC GTGTCTCTGCGTGAA Bphy_0989 1107747 - 1107250 - | hypothetical protein TERM 1256 1107674 - 1107685 + g 79 -7.2 -4.56597 | overlap 1107673 TCGCCGTCCACCTTC GCGC GCCT GCGC TTTTTCGGGAAGGAC TERM 1257 1107996 - 1107951 - H 87 -4 -5.42259 | opp_overlap 1107961 1107962 GGACCCGTAAAAAAA GACATTTTTATGTGCGCCAG CACCTT CTCGCGCGCATTGAAATATC CGTTGCACCCGTCGA TERM 1258 1108041 - 1108016 - H 71 -12.5 -2.57564 | gap 1, overlap 1108015 GCACCCGTCGATAAT GGCCGCGTC-CC AGC GGCGGCGCGGCC TTCGACGCGTACGCG TERM 1259 1108933 - 1108899 - g 71 -12.1 -3.28712 | gap 1, overlap 1108900 CGTGCTGGCGGACAA TGCGCAGCGGCTCGCC GACG GGC-AGCCGCTGCCCG CGCCGCTGGCGGGCA TERM 1260 1108932 - 1108900 - g 77 -15.6 -2.57132 | gap 1, overlap 1108899 GTGCTGGCGGACAAT GCGCAGCGGCTCGCC GACG GGC-AGCCGCTGCCC GCGCCGCTGGCGGGC TERM 1261 1108978 - 1108958 - g 75 -10.3 -3.84246 | overlap 1108959 CGGGCAACGATGAAA TCGCGGCGC TCG ACGCCGCGC TGCATCGCACGAGCG TERM 1262 1108977 - 1108959 - g 73 -13.8 -2.90227 | overlap 1108958 GGGCAACGATGAAAT CGCGGCGC TCG ACGCCGCG CTGCATCGCACGAGC Bphy_0990 1108222 - 1109865 + | integral membrane sensor signal transduction histidine kinase TERM 1263 1110456 - 1110473 + G 78 -4 -4.72986 | overlap 1110452 GATGCGTTTATCGAG GCCGTG CGGCGT CTCGGC TTTTTCCTGCAGGTC Bphy_0991 1110039 - 1110527 + | response regulator receiver protein TERM 1264 1110802 - 1110823 + G 79 -2.1 -5.02476 | gap 1, overlap 1110803 1110805 TCGACTACCAGCTCG ACG-GCGCCG AGA CGGGGCTCGA TTTTTTCCGGCGTCT Bphy_0992 1110609 - 1112600 + | PAS/PAC sensor hybrid histidine kinase Bphy_0993 1113157 - 1112708 - | large conductance mechanosensitive channel protein TERM 1265 1112784 - 1112816 + g 77 -11.2 -3.73534 | gap 1 GGCGTGGGCGGCGGG GCGGC-CGCTTCGGC GGGT GCCGGGGCGCGCAGC TTGTTGATGAACTTG Bphy_0994 1114368 - 1113346 - | pyridoxal-5'-phosphate-dependent protein beta subunit Bphy_0995 1115694 - 1114435 - | acetylornithine deacetylase (ArgE) Bphy_0996 1117005 - 1115827 - | peptidase dimerisation domain-containing protein TERM 1266 1116352 - 1116382 + g 80 -14.6 -3.05596 | CGTGTCGCTCAACGC CGCAGCGAGGCGCG CGC CGCGTGTCGCCGCG TTGAGTCCGCGCGTG Bphy_0997 1120504 - 1117010 - | transcription-repair coupling factor TERM 1267 1117066 - 1117119 + g 74 -10.9 -3.64822 | gap 1, overlap 1117037 1117050 1117112 1117113 ACGGTGTGCCGAGCG CGCGCAGCGTCTCCTTCACGGTCGCG ACG CGC-ACCGTGAAATCGGGACTGCGCG TTTCGATGCGCAGCT TERM 1268 1117508 - 1117520 + g 76 -6.2 -4.58685 | overlap 1117497 TGGCGCCGTGAGGTC CGGC TCCTT GCCG TTTTTCAGCGCCTTT TERM 1269 1118641 - 1118679 + g 77 -11.1 -3.72576 | TGCCGCTTGTCATGT CGCC-GATCACGGCGGC GATCGCG GCCGCC-TGGTCAGGCG TTTCCTCGAAGCCGA TERM 1270 1118753 - 1118731 - G 72 -13.4 -3.14211 | AGTCGCGCGGATCAA GCGGGAAGGC ATG GCCTTCGCGC ATGGCACGGCGAGCG TERM 1271 1120455 - 1120434 - G 73 -9.4 -3.93782 | CCATCGAACACGAAA CGCTGGCC GGCTTT GACCAGCG CGACAGGGGTTGAAG Bphy_0998 1120787 - 1121497 + | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase Bphy_0999 1121567 - 1122046 + | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase TERM 1272 1122093 - 1122113 + T 100 -14 -4.58395 | opp_overlap 1122093 CCGCAGAAGCGACAA CGCCACGC AGATC GCGTGGCG TTTTTCACAAATCGA TERM 1273 1122113 - 1122093 - T 87 -14.7 -3.45054 | opp_overlap 1122093 CCGCAGAAGCGACAA CGCCACGCA GAT CGCGTGGCG TTTTTCACAAATCGA Bphy_1000 1122661 - 1122137 - | alkylhydroperoxidase TERM 1274 1122720 - 1122693 - R 100 -11.2 -5.24129 | opp_overlap 1122693 GTTGCCGATAAAAAA GCCCGCTTGCCT TTCG AGCCTAGCGGGC TTTCGACCACACATT TERM 1275 1122693 - 1122720 + r 74 -11.2 -3.53343 | opp_overlap 1122693 GTTGCCGATAAAAAA GCCCGCTTGCCT TTCG AGCCTAGCGGGC TTTCGACCACACATT Bphy_1001 1123285 - 1122737 - | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Bphy_1002 1124887 - 1123538 - | integral membrane sensor signal transduction histidine kinase Bphy_1003 1125665 - 1124931 - | two component transcriptional regulator TERM 1276 1125755 - 1125729 - H 74 -6.7 -4.431 | gap 2 CAGTCAGTTACAAAA TTTAC-CCG-GCC TGT GGCACGGCGTAAA GCCTCGGCGCTTACA Bphy_1004 1125895 - 1126230 + | hypothetical protein TERM 1277 1126992 - 1127009 + G 86 -12.7 -3.94 | ACGACGCTCGATGCA GCGCACG CCGG CGTGCGC TTGTTTCGCGATTCG Bphy_1005 1126329 - 1127495 + | hypothetical protein Bphy_1006 1128411 - 1127503 - | squalene/phytoene synthase TERM 1278 1128769 - 1128744 - R 86 -6.7 -4.96848 | opp_overlap 1128744 TGCCGTACACAAAAA CCCCGCCTGTC TTAT AACTCGCGGGG TTTTTGTTTTCGAGG TERM 1279 1128744 - 1128769 + r 95 -6 -5.45802 | opp_overlap 1128744 TGCCGTACACAAAAA CCCCGCCTGT CTTATA ACTCGCGGGG TTTTTGTTTTCGAGG TERM 1280 1128891 - 1128847 - R 71 -10.1 -3.59979 | gap 1, opp_overlap 1128861, overlap 1128861 CCGGCGCACTCGAAA CGGCGCACACAAAACCCCGC ACGAAG GCGGGGTTTT-CATGCATCG AACCGACGCTGCATG TERM 1281 1128878 - 1128861 - R 85 -9.8 -4.52857 | opp_overlap 1128861, overlap 1128847 ACGGCGCACACAAAA CCCCGC ACGAAG GCGGGG TTTTCATGCATCGAA TERM 1282 1128861 - 1128878 + r 83 -9.8 -4.2828 | opp_overlap 1128861 1128847 ACGGCGCACACAAAA CCCCGC ACGAAG GCGGGG TTTTCATGCATCGAA TERM 1283 1129188 - 1129209 + r 79 -13.1 -3.4678 | TCGAGTGTTCCCTCA TCTGGTTGC ATGC GCAACCAGA TTCTCCTGTAGCGCT Bphy_1007 1129594 - 1129337 - | hypothetical protein Bphy_1008 1130434 - 1129979 - | MarR family transcriptional regulator Bphy_1009 1131643 - 1130498 - | glycerate kinase TERM 1284 1130710 - 1130671 - G 71 -12.8 -2.92613 | gap 1, overlap 1130668 CGGCACCCGAAAGCA GCGTGGCCGGCACGCCCGC CGC GCACGCATGCCGGC-ATGC GATGAAGGGCGCCTT TERM 1285 1131246 - 1131304 + g 84 -8.8 -4.56597 | gap 4, opp_overlap 1131245 1131246 AGCGCGACGAAGAAG CGCCGCACGC-CGGCGTCGAGCAGCGAGCG GAT CGC-CTC-GC-CCACGCCGCGCGTCCCGCG TTTTTCGACGGGAAC Bphy_1010 1132151 - 1133497 + | trigger factor TERM 1286 1133512 - 1133548 + F 100 -21.6 -4.70659 | opp_overlap 1133503 1133500 ATAGCATCGCTGCAA CGGCGTGCCGGCTGTC CGAAC GACGGCCCGCACGCCG TTTTTGCATCTGCGC Bphy_1011 1133680 - 1134339 + | ATP-dependent Clp protease, proteolytic subunit ClpP Bphy_1012 1134547 - 1135818 + | ATP-dependent Clp protease, ATP-binding subunit ClpX TERM 1287 1135819 - 1135830 + F 75 -5.8 -4.56597 | opp_overlap 1135819 GCGGGTTCGAATTGA TCGG CTGC CCGA TTTTTGAAAAAAAGC TERM 1288 1135844 - 1135867 + F 100 -13.2 -5.42514 | opp_overlap 1135844 GATTTTTGAAAAAAA GCCGTTCATG GCGA CGTGAACGGC TTTTTTCGTTTATCG TERM 1289 1135867 - 1135844 - f 100 -11 -5.41143 | opp_overlap 1135844 GATTTTTGAAAAAAA GCCGTTCATG GCGA CGTGAACGGC TTTTTTCGTTTATCG TERM 1290 1136659 - 1136644 - g 82 -6.8 -4.59773 | CTGCAGGTTGAAAAA CGCATC CGCG GACGCG TCAAGCGTCAGATGG TERM 1291 1138055 - 1138021 - g 81 -16.4 -2.71144 | opp_overlap 1138043, overlap 1138032 1138035 CACGTGCCGGAAGGA GCGACACCGAAGGACG GCC CGTCCGCCGGCATCGC GATGACGACGGCGCT Bphy_1013 1136002 - 1138419 + | ATP-dependent protease La TERM 1292 1138487 - 1138468 - f 100 -12.1 -4.7497 | opp_overlap 1138468 GGTAGCCATCAAAAA CCCGCGG CTTTGC CCGCGGG TTTTTTTGTTCACGC TERM 1293 1138468 - 1138487 + F 100 -12.1 -5.7946 | opp_overlap 1138468 GGTAGCCATCAAAAA CCCGCGG CTTTGC CCGCGGG TTTTTTTGTTCACGC Bphy_1014 1138780 - 1139052 + | histone family protein DNA-binding protein TERM 1294 1139344 - 1139327 - f 81 -11.3 -3.90318 | opp_overlap 1139327 CCAGTATCCTAGAAA GGCGAAC TCCG GTTCGCC TTTTTTATTGCCCGC TERM 1295 1139327 - 1139344 + F 100 -11.3 -5.4505 | opp_overlap 1139327 CCAGTATCCTAGAAA GGCGAAC TCCG GTTCGCC TTTTTTATTGCCCGC TERM 1296 1139371 - 1139381 + F 72 -4.6 -4.62069 | overlap 1139353 CCGCTGTTGTACTAT CGGG CGT TCCG TTTTTGGCATCCGAC TERM 1297 1139495 - 1139509 + G 73 -5.6 -4.41348 | GGGTTTCGTCGGTAT CCAGGG TTT CCGTGG TTTCTTTGACGAGAG TERM 1298 1139752 - 1139713 - g 77 -11.4 -3.72576 | gap 1, opp_overlap 1139744 TGCTGGCCGACGAAA CGCAGCGCCTGCACCTGAC GGT GTCCGACG-ACGCGCTGCG TCGCGCGTTGCTCGC Bphy_1015 1139409 - 1141337 + | PpiC-type peptidyl-prolyl cis-trans isomerase TERM 1299 1141389 - 1141407 + T 100 -16 -4.90778 | opp_overlap 1141389 CCGCCACAACAGAAA GCCCCGCA AGT TGCGGGGC TTTTGTTTCGCTGCC TERM 1300 1141407 - 1141389 - T 100 -16 -4.27117 | opp_overlap 1141389 CCGCCACAACAGAAA GCCCCGCA AGT TGCGGGGC TTTTGTTTCGCTGCC Bphy_1016 1141792 - 1141451 - | hypothetical protein Bphy_1017 1142581 - 1141937 - | lysophospholipase Bphy_1018 1142673 - 1143359 + | ABC transporter related TERM 1301 1143393 - 1143415 + T 100 -19.2 -4.05788 | opp_overlap 1143393 TGCAGGCGAAAAAAA CGGGCCTTCG TGA CGAAGGCCCG TTTGGTTTCGAGCGC TERM 1302 1143415 - 1143393 - T 100 -19.2 -5.44119 | opp_overlap 1143393 TGCAGGCGAAAAAAA CGGGCCTTCG TGA CGAAGGCCCG TTTGGTTTCGAGCGC Bphy_1019 1145075 - 1143453 - | glucose-6-phosphate isomerase TERM 1303 1144942 - 1144921 - G 79 -7.1 -4.56597 | overlap 1144922 CGGTTTTTCGAAAAA TCGGCTGCG AGAC CGCCGCCGG AGAGCGTAAAGCGTT TERM 1304 1145345 - 1145312 - R 74 -10.9 -3.524 | gap 1, overlap 1145293 1145313 CACGCACCCAGATAA CGGGACGCCCGCCGCG GTG CGCGCCGGACGTCA-G TCACGCAACGGATAG Bphy_1020 1146934 - 1145342 - | carbohydrate kinase, YjeF related protein TERM 1305 1146097 - 1146059 - G 73 -9.5 -3.90744 | gap 2, overlap 1146037 1146038 1146056 1146060 1146079 CGCGCCGGCAAATAA GGC-GGCGC-GCGCGGCCA GAA TGGGCGCGCCGCACATGCC CGTGTCGCCGCCCAC TERM 1306 1147033 - 1147006 - R 83 -14.2 -3.10715 | overlap 1147022 GCCAGTACCACCTAA GGCATAGGACGA ATGA CCGTCCCATGCC GGATCTGCGTACTCA Bphy_1021 1148347 - 1147046 - | D-amino-acid dehydrogenase TERM 1307 1150544 - 1150530 - g 72 -8.5 -4.16842 | opp_overlap 1150536 TCCAGCTCGAAGAAA GCGGC CTGTC GCCGC GCGAAATCTGGTCGA TERM 1308 1150852 - 1150888 + G 70 -8 -3.96624 | gap 1, opp_overlap 1150885, overlap 1150855 GCACGAGGCAGCCGT CAACGTGCTGCGTCACC CGAC GGTGGCG-AGCAAGTCG TTTCTGATCACGATC TERM 1309 1151966 - 1151938 - g 77 -5.1 -4.62069 | overlap 1151923 1151940 1151941 CCGCGACGCGAAAAA GATCTTCGACGCG CCG CGCGCCGAACTGC ATCGCACGTGGAGCG TERM 1310 1152284 - 1152301 + G 88 -10.5 -4.34402 | overlap 1152283 GCCGATTTCGCGGGC GCCGTCG CGTG CGGCGGC TTTTCCTATGGCGAC TERM 1311 1152548 - 1152560 + G 72 -3.3 -4.63218 | CTGGTCGAAGTGCAA TCGTC GCC GTCGA TTTTCTTCGCGGGCA Bphy_1022 1148831 - 1152910 + | phosphoribosylformylglycinamidine synthase TERM 1312 1152923 - 1152943 + T 100 -10.3 -4.87626 | TAAGGCTTTGTTTTT CCGCCTGCG CGG CGCGAGCGG TTTTTCGTGTTCGCG TERM 1313 1153137 - 1153121 - T 71 -7.3 -4.16307 | TCTGCAAGAAAAACA TTGCCTC GCG AAGGCAA ACAACCTGAAGCAAA TERM 1314 1153163 - 1153178 + T 76 -11.8 -3.33696 | opp_overlap 1153163 GCAAAAAATAAAAAA GCCGCC CAAA GGCGGC TTCCTTCAAACCAGA TERM 1315 1153178 - 1153163 - T 100 -11.8 -6.04324 | opp_overlap 1153163 GCAAAAAATAAAAAA GCCGCC CAAA GGCGGC TTCCTTCAAACCAGA Bphy_1023 1153982 - 1153203 - | PpiC-type peptidyl-prolyl cis-trans isomerase Bphy_1024 1154307 - 1153993 - | BolA family protein Bphy_1025 1154839 - 1154309 - | intracellular septation protein A TERM 1316 1154381 - 1154360 - G 78 -10.1 -3.96148 | CTGCCCGACGATAAA CACGACGAG GCAG CCCGTCGCG CCGAACAGCTTGAAA Bphy_1026 1156593 - 1155076 - | hypothetical protein TERM 1317 1155982 - 1155952 - G 70 -4.6 -4.37886 | overlap 1155968 GCACGCGGGATAAAA GCGGTCGATCAC ATGATCG GCGAGCGAGCGC AACGCATCGACGCGG Bphy_1027 1156782 - 1158464 + | AMP-dependent synthetase and ligase TERM 1318 1159444 - 1159454 + G 74 -4.6 -4.56775 | opp_overlap 1159427 1159439 1159440, overlap 1159440 CGGAGAGCAAGGCGC TGCG TCA CGCG TTTTTCGGCGAGCGT Bphy_1028 1158642 - 1160726 + | 3-hydroxyacyl-CoA dehydrogenase NAD-binding TERM 1319 1160792 - 1160766 - g 84 -15.2 -3.37901 | opp_overlap 1160763 AAAGATGCCAATGAA GTTCTGCTCGTC GTC GACGTGCAGAAC GACTTCATGCCGGGC TERM 1320 1161339 - 1161311 - g 71 -12.3 -3.28712 | CGGTTCGCTCGACAA CGCGTGGCACGCG ATG CGCGCGGCAGGCG TCGAACGCGTACAGG Bphy_1029 1160748 - 1161374 + | nicotinamidase TERM 1321 1161950 - 1161934 - g 71 -7.9 -4.10657 | GGAGACGGCCGAAAA CGTCGCG AAG CGCTACG GCATCTCGAGGGATC Bphy_1030 1161473 - 1162651 + | acetyl-CoA acetyltransferase TERM 1322 1162666 - 1162719 + T 100 -18.4 -3.62597 | gap 2, opp_overlap 1162680, overlap 1162680 1162717 ATACGCCTGCGATTC GCACGT-CGAG-GAAAGCCCGCGTAC GAAA GTGCGCGGGCTTTTTCTTGCGCGTGC TTGTTCGGGCGTCAA TERM 1323 1162680 - 1162703 + T 100 -16 -5.07486 | opp_overlap 1162680, overlap 1162666 CGCACGTCGAGGAAA GCCCGCGTAC GAAA GTGCGCGGGC TTTTTCTTGCGCGTG TERM 1324 1162703 - 1162680 - T 88 -13.8 -3.73775 | opp_overlap 1162666 1162680 CGCACGTCGAGGAAA GCCCGCGTAC GAAA GTGCGCGGGC TTTTTCTTGCGCGTG Bphy_1031 1162949 - 1162731 - | hypothetical protein TERM 1325 1162920 - 1162930 + g 72 -8.2 -4.14739 | CGTGTTCCAGCTGAC CCGG TCG CCGG TTTTCAGATGGCTGC TERM 1326 1163650 - 1163616 - g 71 -13.4 -3.01712 | GCCCGGCGCCGAACA CGGGCATCGACCGGGG CCG CCGCAGCCGCCGCCCG GTCAGCGCGGCGAGC Bphy_1032 1163098 - 1163877 + | SH3 type 3 domain-containing protein Bphy_1033 1164416 - 1163925 - | water stress/hypersensitive response domain-containing protein TERM 1327 1164452 - 1164440 - H 90 -10.5 -4.56597 | opp_overlap 1164439 CCCTTCGGGGAAAAA GCCCG AGT CGGGC GTATCGTATGAATTC Bphy_1034 1164573 - 1165196 + | hypothetical protein Bphy_1035 1165538 - 1165245 - | GYD family protein Bphy_1036 1165986 - 1166459 + | thioesterase superfamily protein Bphy_1037 1166520 - 1167518 + | alcohol dehydrogenase TERM 1328 1167854 - 1167835 - g 71 -10.6 -3.61398 | opp_overlap 1167834 1167839 TCTGCTGTTCAACAA CGCGGGCG TCGG CGCCGGCG GCTTTCTATGGGAAA TERM 1329 1167919 - 1167935 + G 75 -13.7 -3.02144 | CAACGTGATGGGCGT CGCGCAC GGC GTGCGCG TCTTCGCGCCCATCA Bphy_1038 1167566 - 1168435 + | short-chain dehydrogenase/reductase SDR TERM 1330 1168979 - 1168952 - g 95 -13.4 -4.25104 | overlap 1168953 GTGGCTGCACGAAAA CGCCGCGCCG TACGGCAT CGACGCGGCG CGGATCGCCGTCGGC Bphy_1039 1168521 - 1169480 + | alpha/beta hydrolase domain-containing protein Bphy_1040 1170325 - 1169504 - | hypothetical protein TERM 1331 1170400 - 1170369 - R 87 -16.6 -2.74563 | gap 1 TGGATACGGGAACCA CG-CGTCGCGCCTGC GTC GGAGGCGCGACGTCG AAGGCGACGTGAACG Bphy_1041 1171474 - 1170425 - | putative glycine cleavage T protein (aminomethyltransferase) TERM 1332 1171413 - 1171361 - G 72 -12.7 -3.15544 | gap 3 CGGCAGCGGCATGAA CGCGCCCGCCGCCCGCACG-GCGTCG AACT CGTCACGCGTG-GGGC-GCGGGAACG CGGGAAGCAATGCGG Bphy_1042 1171552 - 1172562 + | aminodeoxychorismate lyase Bphy_1043 1172562 - 1173182 + | dTMP kinase TERM 1333 1174132 - 1174155 + G 72 -11.6 -3.53224 | overlap 1174134 GGCCCAGTCGACGGT CGGCGCGGCG GGCA CGCCGCGCTA TTTCCCGGCGGCGTC TERM 1334 1174134 - 1174153 + G 90 -16.4 -3.34398 | overlap 1174132 CCCAGTCGACGGTCG GCGCGGCG GGCA CGCCGCGC TATTTCCCGGCGGCG Bphy_1044 1173278 - 1174327 + | DNA polymerase III, delta prime subunit Bphy_1045 1174381 - 1175172 + | TatD family hydrolase Bphy_1046 1175224 - 1175997 + | ankyrin Bphy_1047 1176115 - 1176471 + | hypothetical protein TERM 1335 1176473 - 1176504 + F 88 -14.5 -3.62275 | gap 2 AGACGGGCAGTTGAG CGGC--GCACGGCGC CATC GCGCCGTGCTTGCCG TTTGGCCTGGTCGCT TERM 1336 1176531 - 1176559 + F 100 -19.6 -4.61566 | CGCTGTTCATGTCGA CGCGCGCCGTGT GTTCA GCACGGCGCGCG TTTTGTGCTTTCAGC Bphy_1048 1176723 - 1178162 + | alpha,alpha-trehalose-phosphate synthase (UDP-forming) Bphy_1049 1178188 - 1178442 + | hypothetical protein Bphy_1050 1178682 - 1179752 + | glycosyl transferase group 1 TERM 1337 1179828 - 1179795 - T 100 -15.3 -4.3739 | opp_overlap 1179797, overlap 1179797 CATGCGCGCATAAAA GAGGGCGACGCGATC CGAT GATTGCGTCGCCCTT CGTCATCTATGCCGA TERM 1338 1179797 - 1179826 + T 100 -20.1 -3.26545 | opp_overlap 1179795 1179797 TGCGCGCATAAAAGA GGGCGACGCGATC CGAT GATTGCGTCGCCC TTCGTCATCTATGCC TERM 1339 1179826 - 1179797 - T 100 -17.9 -3.79419 | opp_overlap 1179797, overlap 1179795 TGCGCGCATAAAAGA GGGCGACGCGATC CGAT GATTGCGTCGCCC TTCGTCATCTATGCC Bphy_1051 1180578 - 1179991 - | putative lipoprotein TERM 1340 1180934 - 1180949 + r 74 -2.5 -5.00616 | overlap 1180923 1180930 GGAAAGCCGCAGCGG CGTTG CTATGC CAGCG TTTTTTCCAACGGAC Bphy_1052 1181421 - 1180975 - | putative transmembrane protein TERM 1341 1181644 - 1181666 + r 88 -16.2 -3.16475 | opp_overlap 1181644 GAAGCTCGAAAAAAA GCGGCGCCCG TGA CGGACGCCGC TTGCCTGTCTCGCTG TERM 1342 1181666 - 1181644 - R 100 -18.4 -5.43866 | opp_overlap 1181644 GAAGCTCGAAAAAAA GCGGCGCCCG TGA CGGACGCCGC TTGCCTGTCTCGCTG Bphy_1053 1182026 - 1181730 - | PsiF repeat-containing protein Bphy_1054 1182314 - 1182610 + | YCII-related TERM 1343 1183902 - 1183880 - g 72 -11.3 -3.54129 | CACATCGGCCGGAAA TGCGCTCGC GAGCA GCGAGCACA CACCGCTGTGGATGA Bphy_1055 1183125 - 1184441 + | putative transposase A-like protein TERM 1344 1184470 - 1184442 - T 83 -14 -3.50393 | gap 1, opp_overlap 1184448 1184450, overlap 1184445 TCCCACGCGAGATAA CG-ACGATGGCGT GAAC ACGCCATCGTTCG ACGCTGTGCTGCAAC TERM 1345 1184466 - 1184445 - T 82 -14.5 -2.89298 | opp_overlap 1184448 1184450, overlap 1184442 CACGCGAGATAACGA CGATGGCGT GAAC ACGCCATCG TTCGACGCTGTGCTG TERM 1346 1184696 - 1184669 - T 100 -19.2 -3.40299 | opp_overlap 1184665 1184682 1184694 CGACGACATGGAGAA GCGGTGACGGGC AGCA ACCCGTCACCGC GCGATGCGTTATTGA Bphy_1056 1186222 - 1184705 - | mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase Bphy_1057 1186810 - 1188207 + | undecaprenyl-phosphate glucose phosphotransferase TERM 1347 1188675 - 1188726 + G 70 -11.5 -3.38768 | gap 2 CGGCACCGCGCGCCG CGTC-GC-GCATGCCGTGCAGGACG AGCT CGACCAGCGCGGCCTGCAGCAGATG TTCTCGGTCGTGTCG Bphy_1058 1188289 - 1189719 + | nucleotide sugar dehydrogenase Bphy_1059 1189757 - 1190218 + | protein tyrosine phosphatase Bphy_1060 1190212 - 1191393 + | polysaccharide export protein TERM 1348 1191403 - 1191435 + F 73 -12 -3.05596 | gap 1 CGCTGATGCCTTCAT CGACGTCTGCATCGG CATT CCGTTGCGGACG-CG TTGCCTGAACCGCTG TERM 1349 1191620 - 1191606 - g 74 -10 -3.75766 | GCCAGAACCGAAGAA GAGGAC GTG GTCCTC GGCCAACTGCTGCAG TERM 1350 1191663 - 1191698 + G 75 -12.6 -3.46563 | gap 1, overlap 1191664 GACATCGGGTGGCTG ATCGG-CATCGCGGCGA CCA TCGTCGCGATGGCCGGC TTCTACTGCTATGTC TERM 1351 1191664 - 1191697 + G 78 -16.1 -2.67456 | gap 1, overlap 1191663 ACATCGGGTGGCTGA TCGG-CATCGCGGCGA CCA TCGTCGCGATGGCCGG CTTCTACTGCTATGT TERM 1352 1193085 - 1193069 - g 95 -15.1 -4.07568 | GGCGCTGCTCGAAAA CGCCGCG GTG CGCGGCG GCGCGCGCGAGCGTG Bphy_1061 1191585 - 1193777 + | exopolysaccharide tyrosine-protein kinase TERM 1353 1194715 - 1194693 - g 85 -12.6 -4.07568 | overlap 1194706 CGCTGGGTTCGAAAA GCGCGCGCAC GAA GCTCGCGCGC TGGCATGCCGTGCGT Bphy_1062 1193843 - 1194799 + | glycosyl transferase family protein Bphy_1063 1194796 - 1195968 + | putative glycosyltransferase group 1, RfaG-like protein Bphy_1064 1195972 - 1197432 + | putative transmembrane protein TERM 1354 1197556 - 1197612 + G 74 -12.8 -3.28791 | opp_overlap 1197605 GTCGCCTCGCATGTC GCGCCCGAACTGCTGCAGCACCCGCT CGTGA AGTGGGTGCCCGTGAAGATCGGGCGC TTCTGGCCGACCAAT TERM 1355 1197933 - 1197909 - g 74 -12.8 -3.28712 | GGCCGTGTCGCAGAA GGTCGCGGCG GAGAT CGCCGCGATC GGGCTCACGCCGCGC TERM 1356 1198585 - 1198553 - g 87 -17.7 -2.91264 | overlap 1198572 CGCTGTATCGACAGA TCGCGGGGCGGCG CGAAGAC CGCCGCCGCGCGA CGACACTCGACCACA Bphy_1065 1197433 - 1198668 + | glycosyl transferase group 1 Bphy_1066 1198720 - 1199877 + | glycosyl transferase group 1 TERM 1357 1199916 - 1199935 + F 100 -15 -5.30616 | opp_overlap 1199910 1199915 1199914 GCGAAGTGACGAACG GGACGGCC GCGA GGCCGTCC TTTTTCTTTGGGTGG Bphy_1067 1200203 - 1200463 + | XRE family transcriptional regulator TERM 1358 1201323 - 1201338 + G 71 -7.6 -4.18018 | opp_overlap 1201310 CATCCGCGAAGGCGT CAGCTT CGAG AAGCTG TTTTCGCTCCAGCGG TERM 1359 1201606 - 1201632 + G 79 -11.5 -3.85698 | gap 1, opp_overlap 1201583 GCGCTCGCGGATTTT GCGCAGCGCACG GGCA CG-GCGCCGCGC TTTCTCGCGCGCGAA Bphy_1068 1200463 - 1201824 + | HipA domain-containing protein TERM 1360 1201871 - 1201847 - T 74 -7.8 -4.11484 | opp_overlap 1201850 1201851, overlap 1201851 GTCAATCGGGTAAAA CAAAGGGCGC TTTAC GTGCCCCTTG CTCGTCGACGGATGT TERM 1361 1201867 - 1201851 - T 72 -5 -4.65263 | opp_overlap 1201850 1201851, overlap 1201847 ATCGGGTAAAACAAA GGGCGC TTTAC GTGCCC CTTGCTCGTCGACGG Bphy_1069 1202929 - 1201886 - | GDP-mannose 4,6-dehydratase Bphy_1070 1203705 - 1202926 - | GDSL family lipase TERM 1362 1203748 - 1203691 - G 75 -14.7 -2.73124 | gap 1, opp_overlap 1203730, overlap 1203690 GGCCAGCGCGCAAAG CGCCGCGCGGCGCATCGAGG-CGGGC TTCAAGC GCTCGTCCTCGAGGCTTCGCGCGCCG CGTGCAGCGGTGTCT TERM 1363 1203730 - 1203767 + r 71 -8.3 -3.99374 | gap 1, opp_overlap 1203691 CTTCAAGCGCTCGTC CTCGAGGCTTCGC-GCGC CGC GTGCAGCGGTGTCTCGCG TTCTTCTTCATGCGG Bphy_1071 1204817 - 1203717 - | acyltransferase 3 TERM 1364 1204962 - 1204951 - H 72 -4.4 -4.56702 | opp_overlap 1204961 CTGGAATGAAATAAA CGAA TTGA TTCG ATTAATAAAAATCGC TERM 1365 1205361 - 1205375 + G 74 -12.8 -3.20723 | GACCCCTGCCTGCCC GCGCGC TGT GCGCGC TTGCCTTGCTCGCCA TERM 1366 1206055 - 1206075 + G 84 -13.9 -3.64703 | overlap 1206056 GACGGACACGCGAGG CGCGCGGCC GCA GGCCGCGCA TTTCGCTGCCGACGG TERM 1367 1206056 - 1206074 + G 87 -17.4 -2.78679 | overlap 1206055 ACGGACACGCGAGGC GCGCGGCC GCA GGCCGCGC ATTTCGCTGCCGACG Bphy_1072 1205294 - 1207579 + | hypothetical protein TERM 1368 1208584 - 1208628 + G 71 -13.6 -2.65815 | gap 2 TTCACGCATGGGTGG GCAGCGAGGTGGCCGACGCGGC AGG GCC-CGTCGGCCGCATC-CTGA TCATCTCCGTGTGGC Bphy_1073 1207599 - 1209077 + | polysaccharide biosynthesis protein TERM 1369 1209137 - 1209098 - g 71 -10.1 -3.63073 | gap 2 GATATCGTTGAAGAA GACCTGC-T-GCGCCCCAC GCCC GTGAAGCGCGATGCAGGCC ACGATCTCAACACGG TERM 1370 1210976 - 1210962 - g 72 -11.4 -3.53811 | GCGATGTGCCGCAAA GCGTGC TGC GCACGC GGCTGGACCTGCCGC Bphy_1074 1209074 - 1211560 + | glycosyl transferase group 1 TERM 1371 1211575 - 1211602 + T 100 -19.2 -4.85782 | opp_overlap 1211575 ACCAGGAAGGAAAAA GGCCGGTGCGAT CTGT ATCGCGCCGGCC TTTCTTTTTGCCGCA TERM 1372 1211602 - 1211575 - T 100 -17 -4.90869 | opp_overlap 1211575 ACCAGGAAGGAAAAA GGCCGGTGCGAT CTGT ATCGCGCCGGCC TTTCTTTTTGCCGCA Bphy_1075 1212830 - 1211640 - | acyltransferase 3 TERM 1373 1212031 - 1212059 + g 75 -12.4 -3.53811 | opp_overlap 1212038 GCACCGACCATCGGC CACGACATGCGG CTGTC CCGCGCGTCGTG TTTGACCCGCGTGAC TERM 1374 1212248 - 1212233 - G 74 -2.4 -4.74103 | GGCGCAACGCAAAAA GCAGCG GATA CACGGC ATAGAACTGCACTTC TERM 1375 1212581 - 1212566 - G 100 -3.2 -5.55664 | overlap 1212568 TGATGACGAAAAAAA TCGGCA CGCC TGCGGA GCCCCATGCAATTGG TERM 1376 1212731 - 1212759 + g 71 -7.3 -4.1822 | overlap 1212729 CGAATCCGCGCATCG CGTCGATGACGTG TTC CTTGTCGGCGACG TTTGTTGCGCTGCGC TERM 1377 1212967 - 1212984 + H 74 -2.7 -4.93877 | AATGATTGAAAGGGT CTGCA TGCCCTAT TGCAG TTTTATTTCATGCCC Bphy_1076 1213088 - 1213234 + | hypothetical protein Bphy_1077 1213480 - 1214382 + | UTP-glucose-1-phosphate uridylyltransferase TERM 1378 1214435 - 1214389 - T 74 -11.4 -3.51232 | gap 1, overlap 1214385 1214390 GCTGCCTGAAAGCAA TGCCAGCGGCGGCGACGGCGC CTCCAT GCGCCGTCGC-GCTGCGGGTG CGCGGGCACGCGCGC TERM 1379 1214434 - 1214390 - T 81 -14.9 -2.70525 | gap 1, overlap 1214389 1214385 CTGCCTGAAAGCAAT GCCAGCGGCGGCGACGGCGC CTCCAT GCGCCGTCGC-GCTGCGGGT GCGCGGGCACGCGCG TERM 1380 1214475 - 1214526 + T 100 -16.6 -3.65902 | gap 1 CACGACGAAGGGGAC CCGCTGGCCGACGATGCGCGAGCGA GTA TTGCGCGCACATCGTCG-TCGGTGG TTTCGCTGAAGTCGG Bphy_1078 1215127 - 1214459 - | phosphoribosyltransferase TERM 1381 1214768 - 1214816 + g 86 -10.2 -4.26903 | gap 2, opp_overlap 1214792, overlap 1214769 CGCCACGTCGACATG CGCGC-GCT-GCGGGTCGCGAAAC AGT GCTTCGCGTCGCGCAAGCTGCGCC TTTTCCTCCGCTAGC TERM 1382 1214769 - 1214815 + g 76 -13.7 -3.1582 | gap 2, opp_overlap 1214792, overlap 1214768 GCCACGTCGACATGC GCGC-GCT-GCGGGTCGCGAAAC AGT GCTTCGCGTCGCGCAAGCTGCGC CTTTTCCTCCGCTAG TERM 1383 1214909 - 1214894 - G 71 -10.4 -3.60525 | TTCATTCACATACAA CGCGTC GCCC GACGCG ATCGCACCCATCGCG Bphy_1079 1215931 - 1215161 - | IclR family transcriptional regulator TERM 1384 1216135 - 1216172 + H 100 -15.7 -3.67597 | opp_overlap 1216126 1216127 1216167, overlap 1216126 TGCAAACCCGCGAAC CGCGCGTTAATCGCACA ACAC TGTGCGATTAACGAACG TTATTGCGTCCGGGA TERM 1385 1216871 - 1216857 - g 74 -11.4 -3.61715 | opp_overlap 1216857 GATGGGCGTGAAGAA CGCGCT GCC AGCGCG CCGCGAGATTCTCGA TERM 1386 1217081 - 1217054 - g 95 -14.8 -4.08394 | opp_overlap 1217051, overlap 1217038 ACACGCTGGCGAAAA GCAACGCGCAGC TCGT GCAGCGCGTCGC GGATCTGTGCGGCCA Bphy_1080 1216318 - 1217163 + | hypothetical protein TERM 1387 1217251 - 1217273 + G 71 -10.5 -3.65902 | opp_overlap 1217250 1217251 ACGCTCGTCGAGAAG CTCGCTGCG ATTCG CGCGGCGGG TTTCGATGGCGTCGA TERM 1388 1218053 - 1217997 - g 75 -14.4 -3.04144 | opp_overlap 1217997 GCTGTACCTCGAAGA GCAGGCGGCGC-ATCAGCGCACGGGGCA GAG CGCGCAGC-CGCTGTTCACGCCGCCTGC GCCGCCCGCGCATTC TERM 1389 1218235 - 1218246 + G 83 -2.2 -5.14563 | GCGGAGACGGATTCA TTCG CGAG CGAG TTTTTTCATCGGCAC Bphy_1081 1217200 - 1219086 + | 4-hydroxyphenylpyruvate dioxygenase TERM 1390 1219273 - 1219257 - f 77 -12.3 -3.53012 | CCGTTCGCCGGCAAA GCGATGC GCT GCATCGC CATAACACTCAAACA Bphy_1082 1219304 - 1220521 + | porin TERM 1391 1220512 - 1220526 + F 86 -5.6 -5.03747 | overlap 1220490 AGCGGGCATCATTCA CCGCTT CTG ATGCGG TTTTTTGCCGGCTTT TERM 1392 1220603 - 1220628 + F 100 -14.7 -5.00616 | opp_overlap 1220605, overlap 1220607 TTGCGTGAAGCAGGA CAGGGCGCCGC AATT GCGGCGCTTTG TTTTTTCGGGCACGC TERM 1393 1220607 - 1220624 + F 100 -14.1 -5.04249 | opp_overlap 1220605, overlap 1220603 GTGAAGCAGGACAGG GCGCCGC AATT GCGGCGC TTTGTTTTTTCGGGC TERM 1394 1220950 - 1220927 - g 75 -6.6 -4.42238 | overlap 1220930 GCAGCGCAAGGAAAA GCAGGCTGCG GACA CGCACGCTGC CCAACCGGGCAAGAA TERM 1395 1221129 - 1221119 - g 72 -8.2 -4.09685 | CGGCAGGTTGCAAAA GCGG TAT CCGC TGGCGTTTCCGAAGA Bphy_1083 1220856 - 1221512 + | ProQ activator of osmoprotectant transporter ProP Bphy_1084 1221727 - 1223211 + | integrase catalytic region Bphy_1085 1224726 - 1223482 - | hypothetical protein TERM 1396 1224662 - 1224644 - G 75 -3.9 -4.71382 | gap 1, opp_overlap 1224644 AGAACCAGCGAAAAA TTCTG-GG TATC CCGCAGAA TATCGTCAGCGGAAG Bphy_1086 1225560 - 1224958 - | hypothetical protein TERM 1397 1225959 - 1225977 + r 88 -11.6 -4.11216 | GCTTATGCGGCTGCC CGGGGCGC TCG GCACCCCG TTTTCCGAATGCAGA Bphy_1087 1227153 - 1226266 - | hypothetical protein Bphy_1088 1227658 - 1228515 + | hypothetical protein TERM 1398 1229539 - 1229526 - g 74 -2.3 -4.84359 | GCACGCGCAGAAAAA CGGAC GGAC GTCGG CAAGGCGACGATCAT Bphy_1089 1228794 - 1230275 + | arginine/ornithine antiporter Bphy_1090 1230289 - 1231548 + | arginine deiminase Bphy_1091 1232675 - 1231662 - | hypothetical protein Bphy_1092 1234524 - 1233043 - | PAS/PAC sensor signal transduction histidine kinase TERM 1399 1233186 - 1233211 + g 70 -11.1 -3.4252 | overlap 1233183 AGTCGGGCTTGTCGC CGGGCGCGG AAGCCGCC CCGCGTCCG TTGTCATCGATGCGA Bphy_1093 1234885 - 1234622 - | hypothetical protein Bphy_1094 1235697 - 1235005 - | signal-transduction protein Bphy_1095 1236267 - 1237094 + | hypothetical protein Bphy_1096 1237292 - 1237558 + | hypothetical protein TERM 1400 1238165 - 1238133 - g 85 -11.9 -4.07687 | overlap 1238110 1238134 ACGCTCTGCGCAAAA TGGTGCGCACGACGG CAA CCGTCGTGCGCCGGA TCGGGGAGGATAGTC TERM 1401 1238163 - 1238134 - g 76 -14.3 -3.04398 | gap 1, overlap 1238110 1238133 CGCTCTGCGCAAAAT GGTGCGCACGACGG CAA CCGTCGTGCGC-CG GATCGGGGAGGATAG TERM 1402 1239162 - 1239150 - g 75 -6.9 -4.37886 | GCACGCTCGACAAAA GCCAC TAT GCGGC AACAAAAGCGATTAC Bphy_1097 1237691 - 1240363 + | magnesium-translocating P-type ATPase Bphy_1098 1241377 - 1240373 - | 1-phosphofructokinase Bphy_1099 1243831 - 1241387 - | phosphoenolpyruvate synthase TERM 1403 1242142 - 1242122 - G 78 -13.9 -3.21276 | overlap 1242120 1242124 GGGCCGCGGATAACA CACGGCCGC TAT GCGGCCGAG TCCGCAGGCAAGCCG TERM 1404 1242140 - 1242124 - G 80 -15.1 -3.17146 | overlap 1242122 1242120 GCCGCGGATAACACA CGGCCGC TAT GCGGCCG AGTCCGCAGGCAAGC Bphy_1100 1244344 - 1243874 - | hypothetical protein Bphy_1101 1245049 - 1244399 - | transport-associated TERM 1405 1246141 - 1246193 + G 72 -12.7 -3.17051 | gap 2, overlap 1246122 1246139 GCGCGGTTTCGAGCG CTGGCTTGTCGGCAGCGTCGCCGCC CGCAC GGT-GCGACTC-GCCGACACGCCCG TATTGCTCGTGCGAG Bphy_1102 1245275 - 1246234 + | UspA domain-containing protein Bphy_1103 1248897 - 1246429 - | ATPase, P-type (transporting), HAD superfamily, subfamily IC TERM 1406 1247096 - 1247040 - G 71 -14.4 -2.71011 | overlap 1247026 AGTCGTCGCGAAGCA GCACCAGCGACGCGACTTCGCG-CGCCA CTT CGGCGCCGCGGCGTCCCATCGC-GATGC CGATATGCGCAGCCT Bphy_1104 1249375 - 1248884 - | putative signal peptide exported protein Bphy_1105 1249721 - 1251085 + | beta-lactamase domain-containing protein Bphy_1106 1252988 - 1251132 - | poly-beta-hydroxybutyrate polymerase domain-containing protein TERM 1407 1253040 - 1253016 - R 90 -15.7 -3.48593 | GATCTCGCCACAGAA CCATGCCTGCG TTA CGCGGGCATGG ACTCGAACACCTGAC Bphy_1107 1253327 - 1253088 - | hypothetical protein Bphy_1108 1254040 - 1253390 - | transport-associated TERM 1408 1253994 - 1254009 + g 74 -4.7 -4.49958 | ACGGCGGGGTCCCAC TCGAG TTCATC CTCGA TTTCTTTCCTCAACT TERM 1409 1254406 - 1254373 - g 86 -16 -3.18264 | gap 1, opp_overlap 1254399 1254400 CTGCTGACTTACGAA CCCGCGCACG-GCCG TGCGC CGGCTCGTGCCCGGG GCGACACCCCTGCCG TERM 1410 1254806 - 1254856 + G 73 -14.1 -2.80994 | opp_overlap 1254853, overlap 1254794 TGCCGCCGCAGCAGC GCGATATCTTCTCTGCCGTCGCG GCAGG CGCAATGGCACAGAACGTATCGC TGTACTGCGCTTCCG Bphy_1109 1254262 - 1255011 + | hypothetical protein TERM 1411 1255064 - 1255100 + T 93 -11.5 -4.64766 | opp_overlap 1255067 1255072, overlap 1255066 TTGCGCGAACAAGAA CAAGGAAACGGGCCTGG CAT TCAGGCCGGTTTCCCCG TTTTTCCGCTCTCCG TERM 1412 1255066 - 1255098 + T 71 -12.7 -2.62545 | opp_overlap 1255067 1255072, overlap 1255064 GCGCGAACAAGAACA AGGAAACGGGCCTGG CAT TCAGGCCGGTTTCCC CGTTTTTCCGCTCTC TERM 1413 1255097 - 1255067 - T 100 -15.5 -4.09963 | opp_overlap 1255066 1255064, overlap 1255072 CGCGAACAAGAACAA GGAAACGGGCCTG GCATT CAGGCCGGTTTCC CCGTTTTTCCGCTCT TERM 1414 1255092 - 1255072 - T 74 -8.2 -4.15849 | opp_overlap 1255066 1255064, overlap 1255067 ACAAGAACAAGGAAA CGGGCCTG GCATT CAGGCCGG TTTCCCCGTTTTTCC Bphy_1110 1255673 - 1255236 - | heat shock protein Hsp20 Bphy_1111 1256474 - 1255794 - | transport-associated Bphy_1112 1258625 - 1256664 - | ATP-dependent metalloprotease FtsH TERM 1415 1258368 - 1258396 + g 79 -10.1 -4.11216 | opp_overlap 1258384 AGCTGCCGCGTCCGA TGCCGGCAGCAGC GAA GCGGCACCCGGCA TTTTGAGCGTACCGG Bphy_1113 1258806 - 1260428 + | chaperonin GroEL TERM 1416 1260615 - 1260636 + F 70 -4.3 -4.69053 | overlap 1260619 CCAGCGACACGGATG CGTTCTGGC GGGC GCCGCAGCG TTTTCTTCGGTACTG Bphy_1114 1260671 - 1261966 + | polyhydroxyalkanoate depolymerase, intracellular TERM 1417 1262976 - 1262966 - gT 70 -4.6 -4.34402 | TTTTGTACAGTAAAA GCGC CTC GCAC ACGAAAGCCGCCGCA Bphy_1116 1263916 - 1263641 - | periplasmic protein of unknown function, DUF1488 Bphy_1115 1261963 - 1263702 + | hypothetical protein Bphy_1117 1264691 - 1264221 - | UspA domain-containing protein Bphy_1118 1264941 - 1265396 + | hypothetical protein Bphy_1119 1266249 - 1265410 - | Ion transport 2 domain-containing protein Bphy_1120 1266677 - 1266429 - | hypothetical protein Bphy_1121 1267907 - 1267026 - | H+transporting two-sector ATPase gamma subunit TERM 1418 1267170 - 1267200 + g 80 -8.2 -4.36914 | overlap 1267161 GCCGACGTGATCGCT CGCCGCGAGCAT CGCTGTC ATGCGCGCCGCG TTTTCTGCAGCAAAA Bphy_1122 1269465 - 1267888 - | ATP synthase F1, alpha subunit TERM 1419 1268622 - 1268659 + g 71 -13.3 -2.94747 | opp_overlap 1268634 CGCGTCCGGGCGGCT CGCGGGTAAGCAGCGCG AGCT CGCGATGCGTGGCCGCG TGTCTGGTCAGATCG Bphy_1123 1270195 - 1269452 - | H+transporting two-sector ATPase B/B' subunit Bphy_1124 1270448 - 1270203 - | ATP synthase F0, C subunit Bphy_1125 1271140 - 1270445 - | ATP synthase F0, A subunit Bphy_1126 1271430 - 1271137 - | hypothetical protein Bphy_1127 1271737 - 1271423 - | F0F1-ATPase subunit Bphy_1128 1272165 - 1271734 - | alternate F1F0 ATPase, F1 subunit epsilon Bphy_1129 1273648 - 1272179 - | ATP synthase F1, beta subunit TERM 1420 1273581 - 1273567 - G 77 -12.8 -3.40071 | opp_overlap 1273567 AATCGACATCGACAA CGGCGC CCC GCGCCG CGATCACGCGCCCCG Bphy_1130 1273866 - 1274480 + | LemA family protein Bphy_1131 1275464 - 1274718 - | acetoacetyl-CoA reductase Bphy_1132 1275711 - 1275466 - | hypothetical protein Bphy_1133 1275922 - 1276761 + | UspA domain-containing protein Bphy_1134 1276778 - 1277281 + | UspA domain-containing protein Bphy_1135 1277278 - 1278111 + | UspA domain-containing protein Bphy_1136 1278740 - 1278294 - | UspA domain-containing protein TERM 1421 1278907 - 1278897 - H 76 -6.8 -4.42788 | overlap 1278887 TGTAAGCGCACAAAA CGCT GAG AGCG GGGTGCATGCGAGTC TERM 1422 1279002 - 1278984 - H 72 -5.2 -4.48987 | CGCGTACAATCAAAA GCACGGTC ATC AATCGTGC CAGGCAACGCAGGTC Bphy_1137 1279121 - 1279765 + | two component LuxR family transcriptional regulator Bphy_1138 1279935 - 1280717 + | Crp/FNR family transcriptional regulator Bphy_1139 1280885 - 1281916 + | hypothetical protein Bphy_1140 1281952 - 1282296 + | cytochrome c family protein Bphy_1141 1282340 - 1282708 + | hypothetical protein Bphy_1142 1283055 - 1282735 - | hypothetical protein TERM 1423 1284067 - 1284049 - g 84 -13.8 -3.63068 | opp_overlap 1284049 CTACATGATCTGAAA CCGCGCCC GAT GGGCACGG GTCGCGATCTGTACG Bphy_1143 1283440 - 1284948 + | PAS/PAC sensor signal transduction histidine kinase Bphy_1144 1284958 - 1285410 + | response regulator receiver protein TERM 1424 1286349 - 1286336 - g 70 -2.3 -4.59853 | overlap 1286337 CGAATGCGCGAAAAA CGGCA ACCG CGCCA CAGATATCGATGCGC Bphy_1145 1285407 - 1286879 + | multi-sensor signal transduction histidine kinase TERM 1425 1286882 - 1286872 - f 70 -2.4 -4.77165 | CGGTTGAGAACAAAA GCCC TTA GGCC ACACGGGGCCGTTGC Bphy_1146 1287091 - 1287567 + | CreA family protein Bphy_1147 1287900 - 1287610 - | hypothetical protein Bphy_1148 1288939 - 1288145 - | ABC transporter related Bphy_1149 1289937 - 1288939 - | monosaccharide-transporting ATPase Bphy_1150 1291013 - 1289934 - | ABC-type sugar transport system periplasmic component-like protein TERM 1426 1291323 - 1291301 - R 100 -12 -4.45544 | opp_overlap 1291294 1291321 GCGCACCAACGAAAA GGCCCGGA ACAGACG TCCGGGCC TTGCAGGCTTTCAGG Bphy_1151 1291826 - 1291362 - | hypothetical protein TERM 1427 1291906 - 1291890 - R 79 -13.7 -3.05844 | TCGCGCATTCGAAGA GCCGCTC GAT GAGCGGC CCGCTCAGTCCGTCT Bphy_1152 1292918 - 1291911 - | RpiR family transcriptional regulator Bphy_1153 1293942 - 1292875 - | peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase TERM 1428 1293089 - 1293123 + gr 73 -11.3 -3.33815 | opp_overlap 1293087, overlap 1293088 GTATCGGCAAGGATC GCGAGCGGATCGGGC GCGCG GCCCGCTTCGCGTGC TTCGTTCAGCAGCGT TERM 1429 1293356 - 1293326 - GR 78 -7.6 -4.3467 | gap 1 AGCGTCAGATGAAAA CCGC-CTGCGCGA GGACTG TCGCGCAACACGG TAAGGGCTGCGTCGA TERM 1430 1293517 - 1293487 - GR 91 -16.9 -3.59979 | overlap 1293516 CTCCGTCACCGCAAA CGTGTGTCCCGGC AGCGA GCCGGGATACACG AACGCCGCAAATCCG Bphy_1154 1294693 - 1293953 - | ABC transporter related Bphy_1155 1295346 - 1294690 - | polar amino acid ABC transporter, inner membrane subunit Bphy_1156 1296119 - 1295373 - | extracellular solute-binding protein TERM 1431 1296428 - 1296399 - R 100 -15 -4.75776 | overlap 1296423 AATCCAATGCAAAAA CGCGCGCTCCGC CTGGAC ACGGAACGCGCG TTCGCCGCTGCGGCG Bphy_1157 1297642 - 1296503 - | porin TERM 1432 1297837 - 1297806 - R 75 -8.8 -4.08317 | gap 1 GAAGCTGAAATGAAA TG-GGGCGCATCC CTCTCGC AGATGCGCCCTCA CCGGCTAATTGCAGC Bphy_1158 1298974 - 1298069 - | LysR family transcriptional regulator TERM 1433 1299138 - 1299162 + G 75 -7.1 -4.37658 | opp_overlap 1299137 TCGCCATTCGAAACG CGGCCGG CCAGTACGATT CCGGCCG TTTTCTCGACGACTT TERM 1434 1299562 - 1299530 - g 75 -12.6 -3.53012 | opp_overlap 1299530 1299561, overlap 1299515 CTCGCCGCGCTGAAA GCCGTGCTCGACGC GCGCG GCGGCAAGCTCGGC TTCAATCTGAAACTG Bphy_1159 1299110 - 1300531 + | peptidase M20 Bphy_1160 1300542 - 1301864 + | major facilitator transporter TERM 1435 1302270 - 1302250 - g 75 -11.9 -3.45023 | CGACGACGAGCACAA TGCGCCCAT CAC ATGGACGCA CCTGCTGCAACAGAC TERM 1436 1302673 - 1302653 - g 74 -11.1 -3.6284 | AACGATCAGTTGAAA GTCGCGCAG ATG CTGCTCGAC GACGGGCTTGCCGAC Bphy_1161 1301894 - 1302964 + | beta-lactamase Bphy_1162 1304087 - 1302990 - | hypothetical protein Bphy_1163 1304406 - 1304185 - | hypothetical protein TERM 1437 1304361 - 1304343 - G 71 -7.3 -4.07885 | opp_overlap 1304343 1304345 TATGGCGCTCGAAAA GCCGCGC GAAAT GCGCGTC TTCTTTCTTCAGGCG TERM 1438 1304343 - 1304361 + g 75 -8 -4.20367 | opp_overlap 1304343, overlap 1304345 TATGGCGCTCGAAAA GCCGCGCG AAA TGCGCGTC TTCTTTCTTCAGGCG TERM 1439 1304345 - 1304359 + g 71 -9.2 -3.69841 | opp_overlap 1304343, overlap 1304343 TGGCGCTCGAAAAGC CGCGCG AAA TGCGCG TCTTCTTTCTTCAGG Bphy_1164 1305508 - 1304606 - | Beta-lactamase Bphy_1165 1305606 - 1306508 + | LysR family transcriptional regulator Bphy_1166 1308038 - 1306536 - | major facilitator transporter Bphy_1167 1310440 - 1308206 - | DEAD/DEAH box helicase domain-containing protein TERM 1440 1308516 - 1308568 + gr 79 -12.5 -3.33696 | opp_overlap 1308553, overlap 1308556 ATCCAGTCGCCCGAC CAGGTGGCGAGTACCGTGTTGCCGC CAT GCGTGAACACGGCGCGCGTCGCCAG TTCGTTCGAAGCGAA TERM 1441 1308556 - 1308596 + gr 76 -12.5 -3.03159 | opp_overlap 1308553, overlap 1308516 CATGCGTGAACACGG CGCGCGTCGCCAGTTCGTT CGA AGCGAAATAGCGGCGCGCC TCTTCGAGCAGTTCG TERM 1442 1310000 - 1309961 - GR 87 -16.3 -2.96216 | overlap 1309934 GTCGACGACGACATA GCGCAGCGCGCCGAAGG TCGCGG CCAGCGACGCGCCGCGC GTGACGAACATCGCT Bphy_1168 1311722 - 1310412 - | hypothetical protein TERM 1443 1310885 - 1310868 - GR 71 -7.7 -3.96148 | gap 1 CGTGTCGAGCAGAAA CTCGGGCG TGC CGCCC-AG CACGAAGCCGAGCCC Bphy_1169 1314067 - 1311719 - | hypothetical protein TERM 1444 1314163 - 1314126 - R 71 -11.2 -3.27215 | gap 1, opp_overlap 1314145, overlap 1314115 1314114 1314129 AAACTGCGACACGAA CCACGCGCCGCCCACGC TTGTG ACGCGGGCG-CGCGCCG CTATCGTCCTGGCGG TERM 1445 1314160 - 1314129 - R 76 -13.7 -2.81547 | gap 1, opp_overlap 1314145, overlap 1314115 1314126 1314114 CTGCGACACGAACCA CGCGCCGCCCACGC TTGTG ACGCGGGCG-CGCG CCGCTATCGTCCTGG Bphy_1170 1315800 - 1314676 - | transporter DMT superfamily protein TERM 1446 1314742 - 1314763 + g 100 -10.1 -4.86001 | opp_overlap 1314740, overlap 1314744 ATGCCAGAACCTATT CACGCCAGC GCAA GCTGGCGTC TTTTTGTGGGCTGGT TERM 1447 1314744 - 1314761 + g 89 -12.7 -4.05067 | opp_overlap 1314740, overlap 1314742 GCCAGAACCTATTCA CGCCAGC GCAA GCTGGCG TCTTTTTGTGGGCTG TERM 1448 1314859 - 1314883 + g 72 -11.4 -3.5394 | gap 1, overlap 1314848 TTGTGCGCCGTGGGT CGCTGGCGCCG CGTT TGGCGCC-GCG TTTGCCGGCGCGTTT TERM 1449 1315749 - 1315780 + g 100 -15.8 -4.62203 | opp_overlap 1315743 ACCAGCATAGCGCCA GGAGCAGCGCGCCG TAGC CGGCGCCCTCCTCC TTTTGATTGTTTCCA Bphy_1171 1317080 - 1315797 - | aminotransferase class-III TERM 1450 1316085 - 1316041 - G 72 -11.5 -3.53091 | gap 2 ACGCGCCCGTCGAAA CGC-GCCGCGATGCGCGC-CT CGATC AGCGCACCCATCGCAGCCGCG TTGCCGACGAGCCGC Bphy_1172 1318566 - 1317070 - | hypothetical protein Bphy_1173 1319573 - 1318575 - | hypothetical protein Bphy_1174 1320556 - 1319570 - | hypothetical protein TERM 1451 1319909 - 1319897 - G 70 -5.5 -4.20868 | overlap 1319899 CGTCGAAAAGAAGAA CAGCG GAT CGCTA TGCGCCCAGAAGGCG TERM 1452 1320563 - 1320547 - G 71 -3.7 -4.56597 | CCTGTGGTTCAAAAA TGTCG TCCATCG CGACA GCCTCCGTTCATGGC TERM 1453 1321158 - 1321129 - H 95 -11.3 -4.8048 | overlap 1321110 1321132 TTTCGACACGAAAAA CAGGCGCTCCCGC GAAG GGGAGCGCGCCTG AAGGTGGATCGGGTC TERM 1454 1321153 - 1321132 - H 74 -13 -3.00658 | overlap 1321129 CGACACGAAAAACAG GCGCTCCC GCGAAG GGGAGCGC GCCTGAAGGTGGATC TERM 1455 1321809 - 1321786 - g 91 -10.2 -4.62302 | gap 1, overlap 1321788 GAACAGTTCGAAAAA GCG-CCGCGCG CCA CGCGCGGACTC GATGCGATTCGCGCG TERM 1456 1322268 - 1322281 + G 70 -2.3 -4.71426 | AGCGCTGCTGAAAGC GCATC GGCC GAAGC TTTTCTTCCTCAACA Bphy_1175 1321540 - 1322946 + | transcriptional regulator Bphy_1176 1323730 - 1323026 - | carbonate dehydratase TERM 1457 1323895 - 1323857 - R 70 -4.5 -4.43859 | overlap 1323860 GAGAAGGCCATAAAA GAAGCCCCG-GCCGGAC GTGATCG GAGCGGCGCGGGGCT-C GACAAAAAGCTCGCC TERM 1458 1323893 - 1323860 - R 74 -7.3 -4.32669 | gap 1, overlap 1323857 AAGGCCATAAAAGAA GCCCCG-GCCGGAC GTGATCG GAGCGGCGCGGGGC TCGACAAAAAGCTCG TERM 1459 1323927 - 1323904 - R 76 -4.6 -4.82901 | gap 1 GGGGCTCGACAAAAA GCTCGCCTGTT CTC AAGAGGC-AGC CTCACGTTACGCGCG TERM 1460 1323997 - 1323970 - R 100 -24.2 -5.54192 | opp_overlap 1323965 AGCAATCGAAAAAAA CCCCGGTCGCCG GGTG CGGCGACCGGGG GAAGCTCTCTCGCGC Bphy_1177 1325320 - 1324265 - | hypothetical protein TERM 1461 1324826 - 1324807 - G 71 -4.2 -4.57569 | gap 1, overlap 1324808 1324809 CGATCGCGTGAAAAA GCCCGCCGC GCC GCAGCAG-C ACAAACGCCACGACC TERM 1462 1324883 - 1324832 - G 89 -13 -3.99324 | gap 1 CCGCAGCAGCACAAA CGCCACGACCGGCAGCGGCAACG ACAGCAA CAGTGCCGC-GCCGATCGTCACG AGCAGGTCGTCATGC Bphy_1178 1326193 - 1325342 - | hopanoid biosynthesis associated protein HpnK TERM 1463 1325895 - 1325882 - G 78 -3.8 -4.77036 | overlap 1325888 GGGCAGCAGGAAAAA GCGA AAGCCG TCGC GCACCATCCGGTCGC Bphy_1179 1327614 - 1326190 - | hopanoid biosynthesis associated radical SAM protein HpnJ Bphy_1180 1328887 - 1327667 - | hopanoid biosynthesis associated glycosyl transferase protein HpnI TERM 1464 1328961 - 1328985 + r 77 -12.2 -3.53224 | gap 1, opp_overlap 1328959 1328958 ACATAGACACAAGCG GCGAC-GGCTG TCAC CAGCCCGTCGC TTTGACGGGAACGTA Bphy_1181 1329330 - 1328971 - | hypothetical protein Bphy_1182 1330071 - 1329532 - | cytochrome B561 Bphy_1183 1330243 - 1330929 + | two component transcriptional regulator Bphy_1184 1330926 - 1332368 + | integral membrane sensor signal transduction histidine kinase Bphy_1185 1332595 - 1332801 + | hypothetical protein TERM 1465 1332989 - 1333003 + T 81 -12.8 -3.53091 | overlap 1332979 TTTGGCGCGCGCAGG CCGCGC AGC GCGCGG TTTACGCCGGCGCAT TERM 1466 1333023 - 1333063 + T 77 -12.3 -3.57144 | CGCCGGCGCATCGGC GCGCTGGCGCGCTCGAGGC CGC GGCACACGCGCGCGAGCGC TTTCGACATGGACGC Bphy_1186 1333749 - 1333297 - | nuclear protein SET TERM 1467 1333622 - 1333653 + g 72 -6.4 -4.22009 | gap 1, overlap 1333623 CCTCGTTCGATGCGC CGCGCGGCG-CGTCG CCA CGACGTCACCTCGCC TTTGTATTCGATGAT Bphy_1187 1334780 - 1333890 - | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Bphy_1188 1334879 - 1335775 + | LysR family transcriptional regulator Bphy_1189 1337120 - 1335765 - | integral membrane sensor signal transduction histidine kinase TERM 1468 1336182 - 1336205 + g 80 -5.2 -4.72272 | overlap 1336184 GATGCTCTCGATCAG CGCGTCCG GATTCACG CGGACGGG TTTTTCGTCGGCGCC Bphy_1190 1337863 - 1337117 - | two component transcriptional regulator TERM 1469 1337761 - 1337715 - G 73 -13.7 -2.83715 | TCGAGCACGATCAGA TCGGGCCGCTCGGCAG-CGAGCG CCG CGCGCATCTGCCG-GCCACCCGA CGCGAGCGTCGCGCG Bphy_1191 1338270 - 1337899 - | glutathione-dependent formaldehyde-activating GFA Bphy_1192 1338580 - 1338299 - | hypothetical protein TERM 1470 1338542 - 1338492 - G 80 -14.8 -3.14463 | gap 1 AACTTGCGCGAGGAA CGTGCGCTGGCGCACACAGGCGT GTCGTG ATG-CGATGTGCGCCAACGCACG GAGTACCGTTTGCCG Bphy_1193 1339863 - 1338799 - | diguanylate phosphodiesterase TERM 1471 1339444 - 1339412 - G 74 -4.8 -4.4648 | gap 1 AGCGCGACGAGAAAA GCATCTGG-CAACAG CATG CCGTAGTCCGGATGC ATCCAGCGGATCAAT TERM 1472 1339846 - 1339813 - G 87 -8.1 -4.77165 | overlap 1339818 1339821 1339837 CGCCTGAGAAGAAAA CGCAACAACGTTTCG CGCA CGAAACGTCGGCGCC GCACATGAGCGTTCC TERM 1473 1339841 - 1339818 - G 75 -11.8 -3.4724 | overlap 1339813 1339821 1339837 GAGAAGAAAACGCAA CAACGTTTCG CGCA CGAAACGTCG GCGCCGCACATGAGC TERM 1474 1339838 - 1339821 - G 73 -9.9 -3.84389 | overlap 1339818 1339813 1339837 AAGAAAACGCAACAA CGTTTCG CGCA CGAAACG TCGGCGCCGCACATG Bphy_1194 1340043 - 1340366 + | hypothetical protein Bphy_1195 1340781 - 1340440 - | hypothetical protein TERM 1475 1342901 - 1342857 - R 100 -13.4 -4.42238 | gap 1, opp_overlap 1342857 TGACCCGAATTAAAA CGCGTCCTCGCGCGGCGTGCC TCGC GGTGCGCCGCGCC-GTACGCG TATCATGCCGACTCA TERM 1476 1342857 - 1342901 + r 89 -17.8 -2.78816 | gap 1, opp_overlap 1342857 TGACCCGAATTAAAA CGCGTCCTCGCGCGGCGTGCC TCGC GGTGCGCCGCGCC-GTACGCG TATCATGCCGACTCA Bphy_1198 1344370 - 1342904 - | xylulokinase TERM 1477 1345162 - 1345127 - R 100 -17.6 -3.86015 | CATCGGCCGCACAAA CGCCAAGACCCCGC TTTTGAGG GCGGGGTCATGGCG ATGGATAAGGAGCCT TERM 1478 1347813 - 1347824 + r 71 -7.2 -4.2354 | AGGATCTGTTTCACT CCCC TCCC GGGG TTCTTTTCGCCTTTC TERM 1479 1349981 - 1350003 + r 79 -5.4 -4.86731 | TCCGGTACCGTCATC CTCCACCGCT ATT GGCGGCGAAG TTTTCTTTCCGGACA TERM 1480 1350932 - 1350899 - R 73 -11.9 -3.14051 | gap 1, opp_overlap 1350905, overlap 1350905 TGAGTGCCAGGAATA GAA-AAAGCGCGCGAA ACA TCCGCACGCTTTCTTC ATAAGCTCTGGCAGC TERM 1481 1350925 - 1350905 - R 100 -11.1 -5.1244 | opp_overlap 1350905, overlap 1350899 CCAGGAATAGAAAAA GCGCGCGAA ACA TCCGCACGC TTTCTTCATAAGCTC Bphy_1200 1352912 - 1350990 - | hypothetical protein TERM 1482 1353166 - 1353153 - H 70 -3.7 -4.67173 | overlap 1353154 TAACTGAAAAAATAA TGCCG GTCC CGGCT GATAACCCGCGCGAT TERM 1483 1353641 - 1353652 + H 83 -5.8 -5.00884 | opp_overlap 1353641 GTCGCGATTCGAATA CACG TGAA CGTG TTTTTTCAAACGAAT Bphy_1201 1353832 - 1354809 + | hypothetical protein Bphy_1202 1355000 - 1356724 + | Pyrrolo-quinoline quinone TERM 1484 1356857 - 1356871 + F 74 -11.4 -3.55824 | overlap 1356855 CTGCTATGGCCCGAC TGGCCG CAT CGGCCA TATTTGTACATCATG Bphy_1203 1356959 - 1357534 + | hypothetical protein TERM 1485 1358088 - 1358031 - g 100 -22.8 -3.31144 | gap 2, overlap 1358009 1358032 GGCGGACTCGCACAA CGCGCGCGCGTAAGCGGCGACTGGCTCG TGCG CACGCC-GTCGCCGCTCACGT-CGCGCG ACGCGATGGCCGTCG TERM 1486 1358089 - 1358032 - g 100 -22.8 -2.58544 | overlap 1358009 1358031 GCGGACTCGCACAAC GCGCGCG-CGTAAGCGGCGACTGGCTCG TGCG CACGCC-GTCGCCGCTCACGTCGCGCGA CGCGATGGCCGTCGG TERM 1487 1358724 - 1358676 - g 77 -12.4 -3.60805 | gap 1, overlap 1358677 ATACTGGACGGCAAA GTGCGCGGACGC-CTCGTGGTCG ACGT CAACCGCTAGCGCATCCGCGCAT GCACTATCAAAATGC TERM 1488 1358723 - 1358677 - g 78 -15.9 -2.76162 | gap 1, overlap 1358676 TACTGGACGGCAAAG TGCGCGGACGC-CTCGTGGTCG ACGT CAACCGCTAGCGCATCCGCGCA TGCACTATCAAAATG Bphy_1204 1357731 - 1358711 + | quinone oxidoreductase Bphy_1207 1359317 - 1359604 + | hypothetical protein Bphy_1208 1360290 - 1359745 - | hypothetical protein TERM 1489 1360421 - 1360407 - R 81 -4.2 -5.09426 | GCGAACGCCAAAAAA TCCCTG CCA CAGCGA ATCGAACAGCCCCGC Bphy_1209 1361033 - 1360386 - | heat shock protein DnaJ domain-containing protein Bphy_1210 1361207 - 1362115 + | putative transport protein, YfdC-like protein TERM 1490 1362137 - 1362099 - f 74 -11 -3.53444 | gap 1, opp_overlap 1362136, overlap 1362100 CGATTGCGCCTGAAA TCGGC-GAGCGACGCTA GGCGCA TGGCGTCGCTCTGCCGC GTGGGATGCCGCGCT TERM 1491 1362136 - 1362100 - f 80 -14.5 -2.71924 | gap 1, overlap 1362099 GATTGCGCCTGAAAT CGGC-GAGCGACGCTA GGCGCA TGGCGTCGCTCTGCCG CGTGGGATGCCGCGC Bphy_1211 1362390 - 1363904 + | hypothetical protein TERM 1492 1363947 - 1363977 + F 100 -11.9 -5.21709 | overlap 1363949 GACGGACGTTGTAAC G-GGCCGGCCCGGCA CGC TGC-GGGCCGGCTTC TTTTTTCCTGTCGCC TERM 1493 1363949 - 1363974 + F 100 -16.9 -4.69962 | gap 1, overlap 1363947 CGGACGTTGTAACGG GCCGGCCCGGCA CGC TGC-GGGCCGGC TTCTTTTTTCCTGTC Bphy_1212 1364055 - 1364822 + | hypothetical protein Bphy_1213 1364803 - 1365120 + | high potential iron-sulfur protein Bphy_1214 1365257 - 1365922 + | hypothetical protein Bphy_1215 1365950 - 1366303 + | hypothetical protein TERM 1494 1366338 - 1366309 - T 79 -13.6 -3.08312 | overlap 1366296 AAGGCAGTGACGCAA TGAGCGGCACGC CGACGC GCTTGCCGCTCA AAGCTGCGGATCGAG Bphy_1216 1367598 - 1366336 - | phospholipase D/transphosphatidylase Bphy_1217 1367944 - 1367681 - | hypothetical protein Bphy_1219 1368466 - 1368254 - | hypothetical protein Bphy_1220 1369745 - 1368828 - | MscS mechanosensitive ion channel Bphy_1221 1369960 - 1371315 + | major facilitator transporter Bphy_1222 1371436 - 1371900 + | hypothetical protein Bphy_1223 1372149 - 1371919 - | hypothetical protein Bphy_1224 1372265 - 1372453 + | hypothetical protein TERM 1495 1372505 - 1372493 - f 82 -9.1 -4.46112 | opp_overlap 1372462 1372461 1372504 TTGCATCGAAACAAA GTGCG GCC CGCAC GGTTTGGAGAACCGC Bphy_1225 1372697 - 1373674 + | glycosyl transferase family protein TERM 1496 1373726 - 1373706 - T 100 -12.6 -5.44119 | opp_overlap 1373720 GTCAGGCGAAAAAAA GCGGCTCT ATGGA AGAGCCGC TTCCGGTACTTCATG Bphy_1226 1375059 - 1373764 - | major facilitator superfamily metabolite/H(+) symporter TERM 1497 1374841 - 1374797 - G 77 -12.1 -3.58522 | gap 1, overlap 1374835 ACCATCATCGCGAAA CGGCGGCCGCGCTTGTCGGC GAGACG GCCGAAGAAC-CAGCCGCCG ATCGGGCGCATCAGG TERM 1498 1375352 - 1375331 - R 100 -15.9 -5.38054 | opp_overlap 1375333 CTGCACAAACAAAAA GAGCCAGCC CGAA GGCTGGCTC TGGTGATGGATCGTC TERM 1499 1375333 - 1375350 + r 73 -12.7 -2.83164 | opp_overlap 1375331 GCACAAACAAAAAGA GCCAGCC CGAA GGCTGGC TCTGGTGATGGATCG Bphy_1227 1377130 - 1375394 - | SpoVR family protein TERM 1500 1376570 - 1376600 + g 80 -11.9 -3.68988 | GCCATAGGCCGCGTG CGCGATGACGAGG GCCTG CATCGTCATCGTG TTCTCTTCCATCAGA Bphy_1228 1378398 - 1377127 - | hypothetical protein TERM 1501 1378524 - 1378485 - R 83 -14.4 -3.14132 | gap 1, opp_overlap 1378497, overlap 1378510 TGCGCCTCGCAGGAA GCCCGCGCAAATCGGGT GAAGCGA ACCCG-TTTGCGCGGGG GTCGCGCTGCGCGAG Bphy_1229 1380462 - 1378540 - | putative serine protein kinase, PrkA TERM 1502 1380401 - 1380422 + g 73 -5.8 -4.36914 | overlap 1380402 GCGAGATACTCCTCG AGCGAGAG TTCCTC CTCTCGCG TTTTCTCGAAGCGGG Bphy_1230 1380713 - 1381138 + | hypothetical protein Bphy_1231 1382093 - 1381332 - | putative hydratase/decarboxylase TERM 1503 1381851 - 1381839 - G 85 -7.7 -4.60487 | overlap 1381843 CAGCACGCGGAAAAA CGAAC CGT GTTCG AGACGGGCCGGCGAC TERM 1504 1382353 - 1382327 - R 91 -7.3 -5.18371 | gap 1 GCTCAGAAAACAAAA GACGGGTG-CCT GGCG AGGACAGCCGTC CGGTGATGCTGCGTC TERM 1505 1382374 - 1382430 + r 81 -8.7 -4.2828 | opp_overlap 1382403, overlap 1382375 ATGCTGCGTCAATGC GCGGGC-CGACGCGGCGG-ATGTTGACGC AAG GCGGCG-CATGCCGCCGCA-CGAGCCCGG TTTTGGTGCGTCAGA TERM 1506 1382375 - 1382429 + r 73 -12.2 -3.16647 | opp_overlap 1382403, overlap 1382374 TGCTGCGTCAATGCG CGGGC-CGACGCGGCGG-ATGTTGACGC AAG GCGGCG-CATGCCGCCGCA-CGAGCCCG GTTTTGGTGCGTCAG TERM 1507 1382418 - 1382403 - R 73 -11.8 -3.06183 | opp_overlap 1382375 1382374 CGGATGTTGACGCAA GGCGGC GCAT GCCGCC GCACGAGCCCGGTTT Bphy_1232 1384228 - 1382441 - | methyl-accepting chemotaxis sensory transducer TERM 1508 1384465 - 1384432 - R 81 -8.8 -4.2687 | gap 1, overlap 1384406 1384425 1384433 TGTAAAAACTACAAA CTCGACGCGCGAGCG GCCAT CGCCCGCGCG-CAAC AGATGGGAGGACGGA TERM 1509 1384464 - 1384433 - R 73 -12.3 -3.15037 | gap 1, overlap 1384406 1384432 1384425 GTAAAAACTACAAAC TCGACGCGCGAGCG GCCAT CGCCCGCGCG-CAA CAGATGGGAGGACGG Bphy_1233 1385410 - 1384481 - | ribokinase TERM 1510 1384709 - 1384680 - G 76 -9.9 -4.07568 | gap 1, overlap 1384681 CGCGGCGCTTCAAAA TGCTGCGGCTCGGC GTC GCCGAGC-GCCGCG ACGACGCCTTGCGCG TERM 1511 1384708 - 1384681 - G 72 -13.4 -3.04398 | gap 1, overlap 1384680 GCGGCGCTTCAAAAT GCTGCGGCTCGGC GTC GCCGAGC-GCCGC GACGACGCCTTGCGC TERM 1512 1384946 - 1384971 + g 90 -16.1 -3.57144 | opp_overlap 1384915 GCGCGCGACGGCAAG CGCCGCGCGCA CGGC TGCGGGCGGCG TTTCCAGCTGGCAGA Bphy_1234 1386516 - 1385485 - | LacI family transcription regulator TERM 1513 1386014 - 1386030 + g 80 -5 -4.77438 | opp_overlap 1386008, overlap 1386016 TGCAGCAGATGGCGC GTCGCC AGATA GGCGCC TTTTTCATGATCGAT TERM 1514 1386260 - 1386241 - G 79 -4.2 -4.87786 | CGAATTGCAGAAAAA CACGCAGT AGCC ATTGCGCG CACAACCGTCTTCGA Bphy_1235 1387670 - 1386639 - | monosaccharide-transporting ATPase Bphy_1236 1389229 - 1387667 - | ABC transporter related TERM 1515 1388254 - 1388312 + g 84 -16.8 -2.86271 | gap 4, overlap 1388285 1388286 CATCGACGGGCGTGC CGATCTGCACGG-G-CGCTGGCGCCG-CGC CCG GCGTCGGCGCCAGCGATACCGTGCCGC-CG TCCTTCTGATCCGCG TERM 1516 1389514 - 1389568 + r 90 -16.9 -3.39895 | overlap 1389516 1389517 TGAGCGATTGATGAG GATTCGCGCGGCGGCGAGCGGCGCC TGTGC GACGCCACCCGCCGCCGTGCGGCTG TTACTTCGTGACGAG TERM 1517 1389516 - 1389566 + r 100 -19.5 -3.27029 | overlap 1389514 1389517 AGCGATTGATGAGGA TTCGCGCGGCGGCGAGCGGCGCC TGTGC GACGCCACCCGCCGCCGTGCGGC TGTTACTTCGTGACG TERM 1518 1389517 - 1389565 + r 100 -23 -2.55896 | overlap 1389516 1389514 GCGATTGATGAGGAT TCGCGCGGCGGCGAGCGGCGCC TGTGC GACGCCACCCGCCGCCGTGCGG CTGTTACTTCGTGAC Bphy_1237 1390525 - 1389569 - | periplasmic binding protein/LacI transcriptional regulator TERM 1519 1389679 - 1389716 + g 71 -14.1 -2.72344 | opp_overlap 1389670 CGAACACGGCCTGCT TGGCCGCGTACTGGTCA GCCG TGGCGAGCACGCGGCCG TCCTTCAGCATCGGC Bphy_1238 1391053 - 1391691 + | lysine exporter protein LysE/YggA Bphy_1239 1392717 - 1391740 - | magnesium and cobalt transport protein CorA TERM 1520 1392826 - 1392810 - R 72 -9.3 -3.65351 | opp_overlap 1392801 1392799, overlap 1392811 GGACCGTCATGCAAA GCCGCGC AGC GCGCGGT GTCAAGATGTTACGT TERM 1521 1392825 - 1392811 - R 73 -12.8 -2.78996 | opp_overlap 1392801 1392799, overlap 1392810 GACCGTCATGCAAAG CCGCGC AGC GCGCGG TGTCAAGATGTTACG Bphy_1240 1393184 - 1392906 - | hypothetical protein TERM 1522 1393307 - 1393273 - R 74 -11.3 -3.55444 | gap 1 CCGGCAGGTGTGAAA GCGCACGC-GGCGACG AGTG CGGCACCCGCGAGCGC TGCTGCAAAGACGGC TERM 1523 1393428 - 1393444 + r 77 -10.1 -3.9122 | overlap 1393423 CTGTGCCCACACGCC GCGAGGC AGC GCCTTGC TTGTTTGCACACCTG Bphy_1241 1393691 - 1393503 - | hypothetical protein Bphy_1242 1393894 - 1394562 + | hypothetical protein Bphy_1243 1395811 - 1394714 - | saccharopine dehydrogenase Bphy_1244 1396494 - 1396036 - | AsnC family transcriptional regulator Bphy_1245 1397511 - 1396645 - | LysR family transcriptional regulator TERM 1524 1398114 - 1398092 - g 76 -5.5 -4.46073 | gap 1, overlap 1398067 1398093 1398094 1398105 CCGGAACAGAAGAAA CTGGCGGACG AAAC CTTCCGCC-G TCAGCCGCCCGACGG Bphy_1246 1397681 - 1398196 + | hypothetical protein TERM 1525 1398229 - 1398250 + F 100 -17.3 -5.24531 | ACAGCTTCCGCACGA CGCCTGCCG TCAC CGGCAGGCG TTTTTTCTCGAGCAT Bphy_1247 1398366 - 1398803 + | hypothetical protein Bphy_1248 1399194 - 1398829 - | hypothetical protein TERM 1526 1398864 - 1398891 + g 77 -13.4 -3.36273 | gap 1 GCTCCACCGTGACTT CGCGTGGCACGGC CTT GCCG-GCCGCGTG TTCCTCTTCCAGCGA Bphy_1249 1400047 - 1399244 - | putative transmembrane lipoprotein Bphy_1250 1401195 - 1400125 - | LacI family transcription regulator TERM 1527 1400591 - 1400569 - G 74 -10.5 -3.72893 | opp_overlap 1400574 GAGCGCCCGATGAAA CGCGGCTTC GCGCT GACGCCGCG AACTGATGTGTTCGA TERM 1528 1400751 - 1400774 + g 70 -5.8 -4.20516 | opp_overlap 1400736 GCACGGCCGGAATCC CGCCGTCGCC CACG GGCCGCAGCG TTTCTTCGCTGACGC Bphy_1251 1402160 - 1401192 - | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding TERM 1529 1401267 - 1401292 + g 80 -16.1 -2.80816 | GACCAGATTCTCCGC CGCGCAACGCG CCAT CGCGTGGCGCG TCTCGTGCGTCGCGG TERM 1530 1401434 - 1401484 + g 74 -2.5 -4.78753 | gap 2, overlap 1401458 GCAAGGCGGCGATCA GCGCG-TGCTCGTCGACG-GTCTGG CCG CGCGACGCGTTGATCAGGATCGCGC TTTTCTTCATCTTGC TERM 1531 1402092 - 1402056 - G 80 -15.2 -3.14344 | opp_overlap 1402048 CAGCGCGGCGACGAA CG-CGTCGTGCTGCGCGG CGT CCGC-CTGCACGACGTCG GCATGCTGCTTAAGA Bphy_1252 1403439 - 1402165 - | major facilitator transporter Bphy_1253 1404536 - 1403574 - | ribokinase-like domain-containing protein TERM 1532 1404114 - 1404084 - G 85 -16.9 -3.12351 | overlap 1404110 1404111 GCGCGCCATATGGAA CGCGAGTTCGCGC GAACT GCGCGAAATCGCG GGCGCGACGCCCGTC TERM 1533 1404218 - 1404243 + g 74 -11.1 -3.68222 | opp_overlap 1404190 1404217 1404216, overlap 1404218 CCTTGCGGAAATACT CGACGGCGGGA TCGC TGCCGTCGTCG TTCTTCGACTTCAGC TERM 1534 1404218 - 1404240 + g 71 -12.7 -2.94759 | opp_overlap 1404190 1404217 1404216, overlap 1404218 CCTTGCGGAAATACT CGACGGCGG GATCG CTGCCGTCG TCGTTCTTCGACTTC Bphy_1254 1405338 - 1404574 - | xylose isomerase domain-containing protein TERM 1535 1405079 - 1405037 - G 84 -12.7 -3.73775 | gap 2, opp_overlap 1405033 1405037 1405049 TGCAGCTTGACGAAA CGC-GCGCCCAGCGCCG-TCG CTT CGATCAGCGCCTGACGCAGCG CGGCTTCGTCGAGCG TERM 1536 1405417 - 1405406 - R 91 -7.2 -5.22312 | ACGGATATCAAAAAA GCGC GACT GCGC TTGAAGCAAATACTG Bphy_1255 1406383 - 1405469 - | LysR family transcriptional regulator TERM 1537 1407012 - 1407048 + G 81 -13 -3.6053 | overlap 1407009 CAAGAGCGCGATGGC CGTCGGCAGCGTGGTG CTGTT CGGCACGCTGTCGATG TTCCTTTATCCCGCG Bphy_1256 1406503 - 1407588 + | hypothetical protein TERM 1538 1407628 - 1407610 - f 81 -13.1 -3.52102 | opp_overlap 1407610 ACCTCACTCAGACAA GCCCCGC CGCGT GCGGGGC TTTTGTGCTTTCTGC TERM 1539 1407610 - 1407628 + F 100 -13.1 -4.64846 | opp_overlap 1407610 ACCTCACTCAGACAA GCCCCGC CGCGT GCGGGGC TTTTGTGCTTTCTGC TERM 1540 1407733 - 1407713 - f 81 -12.5 -3.53012 | GCTTCCGTGTGCAAA GGCGGCGCA CCC CACGCCGCC GACAACCGAATGAGG TERM 1541 1408186 - 1408147 - g 77 -8.6 -4.24745 | gap 1, opp_overlap 1408160 1408183, overlap 1408149 1408160 TACGAGGAACAGAAA GA-GGCCGCGAAAATCCGC GCG GCGGATTTCATCGACCATC GGATTCCGAAGTTCA TERM 1542 1408183 - 1408149 - g 77 -11.4 -3.71627 | opp_overlap 1408160, overlap 1408147 1408160 CGAGGAACAGAAAGA GGCCGCGAAAATCCGC GCG GCGGATTTCATCGACC ATCGGATTCCGAAGT TERM 1543 1408160 - 1408172 + G 71 -9.1 -3.73224 | opp_overlap 1408149 1408147 1408160 AAGAGGCCGCGAAAA TCCGC GCG GCGGA TTTCATCGACCATCG TERM 1544 1408172 - 1408160 - g 76 -9.1 -4.09511 | opp_overlap 1408160, overlap 1408149 1408147 AAGAGGCCGCGAAAA TCCGC GCG GCGGA TTTCATCGACCATCG Bphy_1257 1407757 - 1408494 + | glutathione S-transferase domain-containing protein TERM 1545 1408522 - 1408551 + F 74 -11.3 -3.53012 | gap 1, opp_overlap 1408543, overlap 1408523 TCGCACCGCCCTCGC CGCGGCGCGCACCC GAA GGGA-CGCGCCGCC TTTCAAACCGCCGCC TERM 1546 1408523 - 1408550 + F 80 -14.8 -2.71712 | gap 1, opp_overlap 1408543, overlap 1408522 CGCACCGCCCTCGCC GCGGCGCGCACCC GAA GGGA-CGCGCCGC CTTTCAAACCGCCGC TERM 1547 1409172 - 1409188 + G 100 -10.8 -5.14563 | opp_overlap 1409170 ACGTCCGCATACAGC GCGCCC ATCGC GGGCGC TTTTTTCGTCACCGA TERM 1548 1409375 - 1409396 + G 79 -11.5 -3.88291 | overlap 1409376 CGCGCTCGGCCTGCT GTGCGGCGC GGCG GCGCCGCAG TTTCTGCGGCTCATC TERM 1549 1409376 - 1409395 + G 79 -15 -2.92653 | overlap 1409375 GCGCTCGGCCTGCTG TGCGGCGC GGCG GCGCCGCA GTTTCTGCGGCTCAT Bphy_1258 1408632 - 1410365 + | chloride channel core TERM 1550 1410458 - 1410435 - f 81 -15.2 -2.62043 | overlap 1410432 1410431 CCTACAATGAATTGA CCCGGCGCCG GGCA CGGCCCCGGG CACGAAAGAAGCTGC Bphy_1259 1410547 - 1411884 + | hypothetical protein Bphy_1260 1412214 - 1412465 + | hypothetical protein Bphy_1261 1412553 - 1412783 + | hypothetical protein Bphy_1262 1412809 - 1413681 + | AraC family transcriptional regulator Bphy_1263 1413773 - 1414147 + | cupin 2 domain-containing protein Bphy_1264 1414792 - 1414172 - | TetR family transcriptional regulator Bphy_1265 1415016 - 1416206 + | RND family efflux transporter MFP subunit TERM 1551 1416257 - 1416277 + G 75 -9.7 -3.96624 | overlap 1416253 TCCGCGTGGGCGCTG CGCCATCAG GCG CTGGTGGTG TTTCTGATCGCGCTC Bphy_1266 1416203 - 1419325 + | acriflavin resistance protein Bphy_1267 1419328 - 1420821 + | RND efflux system outer membrane lipoprotein TERM 1552 1420834 - 1420861 + T 75 -10 -3.65046 | gap 1, overlap 1420826 1420837 TGAGCGACGCGTATC GAGTTATCCCCAG TTT CTGGGGATGA-TC TTGTTGAGATCGCCG TERM 1553 1420837 - 1420859 + T 79 -12.8 -3.40611 | overlap 1420834 GCGACGCGTATCGAG TTATCCCCAG TTT CTGGGGATGA TCTTGTTGAGATCGC TERM 1554 1421092 - 1421123 + T 88 -14.4 -3.54424 | opp_overlap 1421094, overlap 1421094 TCGACTGCACAAAAA AACGCGCCCGTGAT GTCC ACCACGGGCGCGTG TTTGCCGGCGTCGAA TERM 1555 1421121 - 1421094 - T 100 -19.2 -5.626 | opp_overlap 1421094 1421092 GACTGCACAAAAAAA CGCGCCCGTGAT GTCC ACCACGGGCGCG TGTTTGCCGGCGTCG TERM 1556 1421094 - 1421121 + T 90 -17 -3.35046 | opp_overlap 1421094, overlap 1421092 GACTGCACAAAAAAA CGCGCCCGTGAT GTCC ACCACGGGCGCG TGTTTGCCGGCGTCG Bphy_1268 1423510 - 1421150 - | 1A family penicillin-binding protein TERM 1557 1423757 - 1423798 + H 86 -14.3 -3.29144 | CGCTTGAATCGTGAT CGTTGCGCCGCCCGCGCAT CGTT ATGCGCAGCCGCCGCACCG TTGTGCGCCGGATCG TERM 1558 1424777 - 1424803 + G 72 -12.9 -3.06696 | opp_overlap 1424767 CGGAAGCCGCCGCGC GGGTTGCGGCC GCGAA GGCCGCCGCCC TCTCTTCCACAGGCG Bphy_1269 1424311 - 1424976 + | hypothetical protein Bphy_1270 1425521 - 1426201 + | phage shock protein A, PspA Bphy_1271 1426290 - 1427513 + | TPR repeat-containing protein TERM 1559 1427557 - 1427574 + T 100 -12.7 -4.72986 | opp_overlap 1427551 1427552 GGCGACAAACGCGAA GGGCTCC TCAC GGAGCCC TTTTTCATGCGCGTC Bphy_1272 1428290 - 1427610 - | TetR family transcriptional regulator TERM 1560 1428887 - 1428925 + G 79 -10.3 -4.07687 | gap 2, overlap 1428889 GGCGAGCGGACCGTT GTCGCG-TCCCG-CGATGC CGC GCATCGACGGGATCGGGTC TTTTAGCGGCAGGAT TERM 1561 1428889 - 1428923 + G 74 -11.5 -3.63744 | gap 2, overlap 1428887 CGAGCGGACCGTTGT CGCG-TCCCG-CGATGC CGC GCATCGACGGGATCGGG TCTTTTAGCGGCAGG Bphy_1273 1428453 - 1429934 + | putative flavin-binding monooxygenase-like protein Bphy_1274 1430353 - 1430237 - | hypothetical protein TERM 1562 1431296 - 1431242 - g 76 -9.9 -4.08216 | gap 1, opp_overlap 1431244 1431250 CGAGGGCGCCGAAAA CACGGCACGCGCCCAACGTGTGCGTG AAGG CACGCGCAGGATCGGCG-ATGTCGTG CATTCGACCGGTCAC Bphy_1275 1430631 - 1432043 + | methyl-accepting chemotaxis sensory transducer TERM 1563 1432098 - 1432075 - T 100 -11.6 -5.14965 | opp_overlap 1432067, overlap 1432044 ATCTTGATGAAAAAA GCCGGCGTCC TGGC GGGCGCCAGC CATCTGCATTGAATT Bphy_1276 1432949 - 1432131 - | ornithine carbamoyltransferase TERM 1564 1432425 - 1432412 - G 71 -8.1 -4.19587 | overlap 1432415 1432419 TGATGAAGAAAAATA CACGC AACG GCGTG GCACCAAGATCCAGT Bphy_1277 1433878 - 1432949 - | binding-protein-dependent transport systems inner membrane component Bphy_1278 1435038 - 1433875 - | spermidine/putrescine ABC transporter ATPase subunit TERM 1565 1435098 - 1435076 - R 85 -10.5 -4.29508 | opp_overlap 1435076 1435097 ATGTAGACGAACAAA GCCCCCGGC TGGAT ACCGAGGGC TTCATGATGATGCTT Bphy_1279 1436243 - 1435143 - | extracellular solute-binding protein TERM 1566 1436605 - 1436591 - H 84 -2.7 -5.44119 | TCCACCCGAAAAAAA CCTCG CTTCC CGCGG CGGGAAATCCGTGCA Bphy_1280 1436736 - 1438082 + | Mn2+/Fe2+ transporter TERM 1567 1438353 - 1438337 - g 75 -2.9 -4.77438 | overlap 1438338 ACCGATGAGGAAAAA CGCGC TATCTGG ACGCG CATCGAATGCGATGG Bphy_1281 1438199 - 1438402 + | hypothetical protein TERM 1568 1438456 - 1438514 + T 100 -28.7 -3.14344 | opp_overlap 1438473, overlap 1438459 1438473 TTCGATCGGTTACCT -GGATGTGCAATGAAAAACGCCGGCTCTT GAC GAG-GCCGGCGTTTTTCATTGCACATCCG TTCATGCAAACGATG TERM 1569 1438459 - 1438510 + T 100 -29.2 -2.56596 | gap 1, opp_overlap 1438473, overlap 1438456 1438473 GATCGGTTACCTGGA TGTGCAATGAAAAACGCCGGCTCTT GAC GAG-GCCGGCGTTTTTCATTGCACA TCCGTTCATGCAAAC TERM 1570 1438473 - 1438496 + T 95 -11 -4.86621 | gap 1, opp_overlap 1438473, overlap 1438459 1438456 ATGTGCAATGAAAAA CGCCGGCTCTT GAC GAG-GCCGGCG TTTTTCATTGCACAT TERM 1571 1438496 - 1438473 - T 95 -10.3 -4.86621 | gap 1, opp_overlap 1438473 1438459 1438456 ATGTGCAATGAAAAA CGCCGGCTCT TGACG AG-GCCGGCG TTTTTCATTGCACAT Bphy_1282 1439178 - 1438531 - | OmpW family protein Bphy_1283 1440462 - 1439272 - | 2-nitropropane dioxygenase NPD TERM 1572 1440577 - 1440551 - R 90 -7.9 -4.97158 | opp_overlap 1440552 1440553, overlap 1440552 1440553 TGAGATCAAACAAAA CCCGCGTGTCG GTTAT CGACACGCGCT TTCATTGCGTTTCAT TERM 1573 1440576 - 1440552 - R 74 -11.4 -3.5721 | opp_overlap 1440552 1440553, overlap 1440551 1440553 GAGATCAAACAAAAC CCGCGTGTCG GTTAT CGACACGCGC TTTCATTGCGTTTCA TERM 1574 1440552 - 1440576 + r 86 -12.1 -3.98173 | opp_overlap 1440552 1440551 1440553, overlap 1440553 GAGATCAAACAAAAC CCGCGTGTCGG TTA TCGACACGCGC TTTCATTGCGTTTCA TERM 1575 1440575 - 1440553 - R 83 -14.9 -2.73241 | opp_overlap 1440552 1440553, overlap 1440552 1440551 AGATCAAACAAAACC CGCGTGTCG GTTAT CGACACGCG CTTTCATTGCGTTTC TERM 1576 1440553 - 1440575 + r 84 -15.6 -2.98181 | opp_overlap 1440553 1440552 1440551, overlap 1440552 AGATCAAACAAAACC CGCGTGTCGG TTA TCGACACGCG CTTTCATTGCGTTTC Bphy_1284 1442085 - 1440649 - | aldehyde dehydrogenase TERM 1577 1441153 - 1441125 - G 77 -13.1 -3.35813 | GCGTAGCCGAAGCAA GCGGACCGAGACG CGT CGTCTCGACGCGC GGATCGCCCGCGACG TERM 1578 1442104 - 1442114 + r 73 -3.2 -4.73614 | overlap 1442096 TTGCGTCCTGTCTCC TGGA TAG TCCG TTTATTTTACTCATG TERM 1579 1442227 - 1442208 - R 100 -13.6 -5.01042 | opp_overlap 1442208 AACCCAAATGAAAAA CCCGCTTC TTAC GAAGCGGG TTTGAAGGATTTGCA TERM 1580 1442208 - 1442227 + r 83 -13.6 -3.5936 | opp_overlap 1442208 AACCCAAATGAAAAA CCCGCTTC TTAC GAAGCGGG TTTGAAGGATTTGCA Bphy_1285 1443845 - 1442253 - | ABC transporter related TERM 1581 1443342 - 1443362 + g 75 -12.5 -3.53012 | opp_overlap 1443338 1443336 CTTCGAGAACAGCGC CTGCGCGAG CAG CACGCGCAG TTTCCAGCCGGGGGC Bphy_1286 1444834 - 1443941 - | 2-hydroxy-3-oxopropionate reductase Bphy_1287 1445017 - 1445226 + | hypothetical protein TERM 1582 1445336 - 1445308 - T 100 -19.7 -5.14965 | opp_overlap 1445308 ACGCGCATGAAAAAA GCTGCATCCGATG TAA CACCGGATGCAGC TTCTGACGTGCCCAC TERM 1583 1445308 - 1445336 + T 93 -17.5 -3.32844 | opp_overlap 1445308 ACGCGCATGAAAAAA GCTGCATCCGATG TAA CACCGGATGCAGC TTCTGACGTGCCCAC Bphy_1288 1446525 - 1445431 - | basic membrane lipoprotein Bphy_1289 1447517 - 1446588 - | inner-membrane translocator Bphy_1290 1448601 - 1447549 - | inner-membrane translocator TERM 1584 1448584 - 1448551 - G 72 -6.7 -4.208 | gap 1, overlap 1448544 1448536 1448571 GCTGAAAATCAGAAA GCCGATGGCCAGCG TAAGGAG CGC-GGCGATCAGC GGCACGGCAAGCTGC Bphy_1291 1450324 - 1448705 - | ABC transporter related TERM 1585 1449757 - 1449790 + g 70 -13.9 -2.57132 | gap 1, overlap 1449756 CTTGCGGCGTGAGCA CCGACGTCGGCTCGTC CAT GATGAGCAGACG-CGG ATTCTGCAACAGACA TERM 1586 1450353 - 1450374 + H 77 -7.9 -4.28774 | overlap 1450349 1450354 1450366 ACGCGTGTGGTCGGC GGCACGCTG CGTC CGGCGTGCA TTTTCGCTTGAATGC TERM 1587 1450536 - 1450500 - H 100 -17.4 -4.09685 | gap 1, opp_overlap 1450511 GTCGAGCCGCCAAAA TTCCCGCAAAGCCGCGC CGCT GCGCGG-TTTGCGGGTA TCCCTCCCTTGACGG TERM 1588 1450511 - 1450526 + H 77 -11.8 -3.5944 | opp_overlap 1450500 AAAATTCCCGCAAAG CCGCGC CGCT GCGCGG TTTGCGGGTATCCCT Bphy_1292 1450628 - 1451557 + | LysR family transcriptional regulator TERM 1589 1451574 - 1451605 + T 90 -10.9 -4.39989 | gap 1, opp_overlap 1451558, overlap 1451579 GCACAGGCACTACTG TGCA-GGCGGCGGT CTCGA ACCGCCGCTTTGCG TTTTAGTGCTTTGCT TERM 1590 1451579 - 1451599 + T 95 -14 -3.94846 | overlap 1451574 GGCACTACTGTGCAG GCGGCGGT CTCGA ACCGCCGC TTTGCGTTTTAGTGC Bphy_1293 1453029 - 1451620 - | amidohydrolase Bphy_1294 1453650 - 1454003 + | hydroxyisourate hydrolase Bphy_1295 1454234 - 1455424 + | hypothetical protein TERM 1591 1455463 - 1455489 + T 100 -10.1 -5.76633 | gap 1 TCGGTTCTTCACGGT CGGGCTGTTCGC GAAT GCGG-CGGCCCG TTTTTTTCTGTCTAC TERM 1592 1456009 - 1455982 - T 100 -12.8 -6.12458 | CAAAAAAACAAAAAA CCCATCGCAGAT CTCC ATCCGCAATGGG CTTCCGAGCATCAAG Bphy_1297 1456557 - 1456048 - | ureidoglycolate hydrolase Bphy_1298 1457567 - 1456554 - | allantoicase Bphy_1299 1458177 - 1457656 - | hypothetical protein Bphy_1300 1459127 - 1458174 - | urate catabolism protein TERM 1593 1459261 - 1459234 - R 78 -9.1 -4.1899 | overlap 1459235 CCAGTGTAGCGAAAA CGCCCGGATGC GCCCAT ACACCCGGGCA GATAGTGCATGTCAG Bphy_1301 1460130 - 1459273 - | Asp/Glu/hydantoin racemase Bphy_1302 1461669 - 1460173 - | permease for cytosine/purines uracil thiamine allantoin TERM 1594 1461108 - 1461096 - G 70 -5.5 -4.30995 | CGTTCCAGAAAACAA GTGCC TGC AGCAC CCACAGCAGCATGAA Bphy_1303 1462768 - 1462052 - | GntR family transcriptional regulator TERM 1595 1463064 - 1463048 - R 72 -9.4 -3.68767 | opp_overlap 1463048, overlap 1463044 ATACTTGAAAATTAA GGCGAG CCGGC CTCGCC TCTATGCATCGCGAC Bphy_1304 1464020 - 1463094 - | muramoyltetrapeptide carboxypeptidase Bphy_1305 1464675 - 1464034 - | CMP/dCMP deaminase zinc-binding TERM 1596 1464158 - 1464136 - G 85 -4.7 -5.00616 | opp_overlap 1464137 1464141, overlap 1464137 GCGGTCTGCAAAAAA CGCGCGCAG AGCGG CCGCGCACT CCTCTTCGAGCACGC TERM 1597 1464584 - 1464570 - G 87 -5.6 -5.00616 | overlap 1464571 1464573 1464574 CGCGCTCGGAAAAAA TGACGG CGG CCGTCG TCAGGCAGGGCCCGA Bphy_1306 1465073 - 1464672 - | hypothetical protein Bphy_1307 1465166 - 1465480 + | hypothetical protein Bphy_1308 1465635 - 1466288 + | 17 kDa surface antigen TERM 1598 1466573 - 1466521 - f 71 -7 -4.25104 | gap 2, opp_overlap 1466539 1466557 1466558, overlap 1466535 CGCGCGCGACGAAAA TCCGCGCAACGAGACCCGCGATCCAC ATC GTG-ATTGCGGGCATCGTGGC-CTGA TCGCGCTCAGGCGCG Bphy_1309 1466731 - 1468002 + | radical SAM domain-containing protein TERM 1599 1468818 - 1468800 - g 70 -5.8 -4.28774 | TCAGCGAAGCGAAAA GCGGCGCG CAG CGGGTCGC ACAGGCGAGCAGCGT Bphy_1310 1468019 - 1469491 + | phage SPO1 DNA polymerase-related protein Bphy_1311 1469516 - 1470055 + | GCN5-related N-acetyltransferase TERM 1600 1470071 - 1470090 + T 78 -9.2 -4.07687 | opp_overlap 1470073, overlap 1470073 GCACCGGCAATGAAA AAGGGCGC CGCA GCGCCCTC TTTTCAACCCGGCCT TERM 1601 1470088 - 1470073 - T 100 -11.8 -4.86621 | opp_overlap 1470073 1470071 ACCGGCAATGAAAAA GGGCGC CGCA GCGCCC TCTTTTCAACCCGGC TERM 1602 1470073 - 1470088 + T 81 -11.8 -3.63744 | opp_overlap 1470073, overlap 1470071 ACCGGCAATGAAAAA GGGCGC CGCA GCGCCC TCTTTTCAACCCGGC Bphy_1312 1471688 - 1470105 - | GMP synthase, large subunit TERM 1603 1471756 - 1471726 - R 72 -9.7 -3.72588 | gap 1, opp_overlap 1471726 1471728 GAACGGATAGGGAAA GCCGCGCGTGTCGC ATGT GCGACAGG-ACGGC GTTGTCATTAAAACG Bphy_1313 1472725 - 1471901 - | hypothetical protein Bphy_1314 1474192 - 1472732 - | inosine-5'-monophosphate dehydrogenase TERM 1604 1474316 - 1474340 + H 71 -7.1 -4.15669 | overlap 1474317 1474333 1474333 GTCCGATTTCGGTTT TGCGTTCGGGT CGG GTTCGAACGCG TTTCGTTTGTCCATT Bphy_1315 1474486 - 1475460 + | hypothetical protein TERM 1605 1475496 - 1475537 + T 95 -15.3 -3.66356 | gap 1, opp_overlap 1475505, overlap 1475505 CCGATTCAGGCGGCA CGAAGAAAAGGCGCACCG CGTGATA CGGTGCGCCTTT-CGTCG TTTGGCATTGCAGGT TERM 1606 1475505 - 1475529 + T 100 -14.3 -3.8901 | opp_overlap 1475505, overlap 1475496 GCGGCACGAAGAAAA GGCGCACCG CGTGATA CGGTGCGCC TTTCGTCGTTTGGCA TERM 1607 1475529 - 1475505 - T 100 -15 -4.71426 | opp_overlap 1475496 1475505 GCGGCACGAAGAAAA GGCGCACCGC GTGAT ACGGTGCGCC TTTCGTCGTTTGGCA Bphy_1316 1475897 - 1475565 - | hypothetical protein Bphy_1317 1476283 - 1475894 - | cyclase/dehydrase Bphy_1318 1476463 - 1476909 + | SsrA-binding protein Bphy_1319 1477880 - 1476948 - | band 7 protein Bphy_1320 1478423 - 1477971 - | hypothetical protein TERM 1608 1478445 - 1478465 + r 93 -14 -3.89346 | opp_overlap 1478445 CTCCACAAAGCAAAA CACCCCGG AGCTA CCGGGGTG TTTATAGCATGAAGC TERM 1609 1478465 - 1478445 - R 100 -14 -4.61873 | opp_overlap 1478445 CTCCACAAAGCAAAA CACCCCGG AGCTA CCGGGGTG TTTATAGCATGAAGC Bphy_1321 1480948 - 1478543 - | phosphoenolpyruvate synthase TERM 1610 1479299 - 1479272 - G 70 -11.2 -3.35679 | opp_overlap 1479280 1479295, overlap 1479276 CTTGTCGACGTAGAA CGCACGCGGCGA CGCG TGACCGCGCGCG ACGCTTTCGACGGCC TERM 1611 1479280 - 1479303 + g 72 -11.6 -3.54638 | opp_overlap 1479272 1479276, overlap 1479295 CGTAGAACGCACGCG GCGACGCGTG ACCG CGCGCGACGC TTTCGACGGCCTTCT TERM 1612 1479926 - 1479965 + g 81 -16.4 -2.71364 | GCTCTTCACCGTTTC CGGACGCGCCTGCAAGAT GAAG ATCTTGCCGTCGCGGCCG TCCTTGCCCCACTCG TERM 1613 1480986 - 1480973 - H 84 -2.3 -5.43866 | TAAGTGTGAAAAAAA TGCGC GATT GCGTA AGTGGGCTCGAACAC TERM 1614 1481282 - 1481266 - H 78 -9.3 -3.96148 | opp_overlap 1481274, overlap 1481267 CTGTCGGACGAGAAA TGCGCCG CGA CGGCGCC CGCGGCTTGCCGCAC TERM 1615 1481281 - 1481267 - H 74 -12.8 -2.97475 | opp_overlap 1481274, overlap 1481266 TGTCGGACGAGAAAT GCGCCG CGA CGGCGC CCGCGGCTTGCCGCA Bphy_1322 1481326 - 1482159 + | hypothetical protein Bphy_1323 1482985 - 1482185 - | tRNA/rRNA methyltransferase (SpoU) TERM 1616 1483033 - 1483021 - R 100 -10.5 -5.08255 | opp_overlap 1483021 ACGGTGAAAAGAAAA GCGCC GGA GGCGC TTGATGGGTTGGTGC Bphy_1324 1483802 - 1483053 - | ribonuclease H TERM 1617 1483547 - 1483578 + g 70 -2.2 -4.59773 | AATACGCCAGCGCGC GCTCGATGATCT TCTCGTAC AGTTCGTCGCGC TTTTTCGCCGTCAGC TERM 1618 1483768 - 1483797 + g 85 -17.1 -3.14132 | gap 1 TTCGCAGCTGTCTTG CGGCGCGGCGCGGC CGT GCC-CGCCGCGCGG TTCATGGACGCCCCC Bphy_1325 1484968 - 1483799 - | lipid-A-disaccharide synthase Bphy_1326 1485760 - 1484972 - | acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase TERM 1619 1485165 - 1485155 - G 72 -8.2 -4.07568 | overlap 1485139 CGCGTCCGCCGAAAA GCCG CGG CGGC GCAACCCTTCGACAT Bphy_1327 1486390 - 1485929 - | beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ TERM 1620 1486485 - 1486525 + r 100 -21.2 -5.44721 | gap 1 CTGCCGCCCGTTCCT GTGCTGGCTGCGTGCGGCC TGTC GGCCACACGC-GCCAGCGC TTTTTTTCCCGTCGT Bphy_1328 1487636 - 1486560 - | UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase Bphy_1329 1488273 - 1487737 - | outer membrane chaperone Skp (OmpH) Bphy_1330 1490627 - 1488315 - | outer membrane protein assembly complex, YaeT protein Bphy_1331 1492081 - 1490693 - | membrane-associated zinc metalloprotease TERM 1621 1492116 - 1492084 - R 79 -12.7 -3.31792 | TCAGCAGGTTCATAA TCGCCTCACTGGACG GCG CGTTCCGTAAGGCGA GCGCCCGCCGGCAAT Bphy_1332 1493294 - 1492089 - | 1-deoxy-D-xylulose 5-phosphate reductoisomerase Bphy_1333 1494138 - 1493317 - | phosphatidate cytidylyltransferase TERM 1622 1493751 - 1493724 - G 71 -9.8 -3.77831 | CCAGCAACAGGGAAA GCACGAACGGCA CACC CGCCATCCGCGC CGCCACGAGCGCATG TERM 1623 1494113 - 1494128 + g 77 -4.6 -4.62069 | overlap 1494114 GCCAGCAGAACGATC GCCGTG ATGA CACGGG TTTTTAGCATGGAAG Bphy_1334 1494914 - 1494132 - | undecaprenyl diphosphate synthase Bphy_1335 1495546 - 1494986 - | ribosome recycling factor TERM 1624 1495162 - 1495176 + g 74 -11.4 -3.67417 | GGCGCAGGTTGCGCA CGGCCA CCT TGGCCG TTTCACCTTCGCTCT Bphy_1336 1496352 - 1495639 - | uridylate kinase TERM 1625 1496484 - 1496450 - R 71 -10.7 -3.54459 | GCAAGCGCCGCCAAA TTGACGCGCGTCGAC GATCG GTCGAAGCGTGCCAA CCGGGCGACCGCAAC Bphy_1337 1497477 - 1496596 - | translation elongation factor Ts TERM 1626 1497545 - 1497557 + r 72 -4.7 -4.67607 | overlap 1497543 ACAGCATTTCGTTTC CGCGC AGC GCACG TTTATTTCTTCGAGC TERM 1627 1497647 - 1497627 - R 100 -9 -5.47218 | gap 1, opp_overlap 1497627 CGCGACTTAAAAAAA GGGGGC-CT ATAG AGAGCCCCC TTTTTTGCCGGACAC TERM 1628 1497627 - 1497647 + r 100 -9 -5.00616 | gap 1, opp_overlap 1497627 CGCGACTTAAAAAAA GGGGGC-CT ATAG AGAGCCCCC TTTTTTGCCGGACAC Bphy_1338 1498423 - 1497671 - | ribosomal protein S2 Bphy_1339 1498842 - 1499654 + | methionine aminopeptidase, type I TERM 1629 1500784 - 1500800 + G 70 -13.7 -2.57132 | opp_overlap 1500762 1500776, overlap 1500783 GTCAAAGGTCTGTCG GCGCGCA CCC TGCGCGC GTTGTACAACGCGCG TERM 1630 1501543 - 1501515 - g 71 -12.4 -3.17723 | GCACTCGGAACTGAA GCAGCGCCAGGA AGAAG CCCTTGCGCTGC TGCGGCTCGAAACGG TERM 1631 1501577 - 1501556 - g 72 -11.5 -3.53012 | overlap 1501569 1501570 TGCTGCGGCTCGAAA CGGTGCCCG AAAA CGCGCACCG TGCGCTGTGGGACAA Bphy_1340 1499680 - 1502259 + | UTP-GlnB uridylyltransferase, GlnD TERM 1632 1502412 - 1502383 - g 75 -9.2 -4.03234 | overlap 1502384 1502400 GCCCCGGCAGACAAA CCCGCTGCGCAG AGGAAG CCGCGCAGCGAC GCCGGTTCGGCGGCG TERM 1633 1502411 - 1502384 - g 71 -12.7 -3.01726 | overlap 1502383 1502400 CCCCGGCAGACAAAC CCGCTGCGCAG AGGAAG CCGCGCAGCGA CGCCGGTTCGGCGGC TERM 1634 1502509 - 1502475 - g 93 -14.3 -3.97368 | gap 1, overlap 1502496 1502497 GGGCGAAGGGACAAA GCGC-CCGGCCACG AGGAGCAA CGCGGCCGGCGCGC CGGGGGAGCGGCGCG TERM 1635 1502768 - 1502802 + G 77 -13.5 -3.32844 | gap 1 GTCCGTCGCGCAGCG GCGCGGCGTCGCGTGC TGGC GAACGCG-CACCGCGC TTCTCCCGTGACGAC TERM 1636 1503504 - 1503463 - g 72 -3.5 -4.68424 | overlap 1503465 1503499 GAATGGATCGAAAAA GGCTGGGTTACCGTCGACG GCGT CGTCGTCGATAAGCTGGGC ACGAAGGTCCGCCCC Bphy_1341 1502266 - 1504140 + | RNA-binding S4 domain-containing protein TERM 1637 1504169 - 1504194 + T 77 -11.9 -3.50447 | opp_overlap 1504174, overlap 1504174 CTGTCTTATGCAAAC AAAAAGCCCGC ATCC GCGGGCTTTTC TTATATCGAAGTTCG TERM 1638 1504189 - 1504174 - T 100 -11.8 -5.30616 | opp_overlap 1504174 1504169 TTATGCAAACAAAAA GCCCGC ATCC GCGGGC TTTTCTTATATCGAA TERM 1639 1504174 - 1504189 + T 100 -11.8 -4.84311 | opp_overlap 1504174, overlap 1504169 TTATGCAAACAAAAA GCCCGC ATCC GCGGGC TTTTCTTATATCGAA Bphy_1342 1504747 - 1504214 - | peptide deformylase Bphy_1343 1506795 - 1504744 - | DNA ligase, NAD-dependent TERM 1640 1505520 - 1505479 - G 76 -9.4 -4.07568 | gap 2, opp_overlap 1505480, overlap 1505481 CTGCGCCGGGCAAAA CAGGCCGCCCGAACAGCGCG CGAT CGC-CTCGTCGGGCAGCC-G TTCGATCGCGGAGCC TERM 1641 1505519 - 1505481 - G 81 -13.1 -3.63744 | gap 1, opp_overlap 1505480, overlap 1505479 GCGCCGGGCAAAACA GGCCGCCCGAACAGCGCG CGAT CGC-CTCGTCGGGCAGCC GTTCGATCGCGGAGC TERM 1642 1506005 - 1505966 - G 95 -12.8 -4.20783 | gap 1, opp_overlap 1505966, overlap 1505967 ACCTTATGGAAGAAA CCGAGCACGCCTTCGGCGC CCT GCACC-ACGGCGCGCTCGC TGTTCACGGGCAAGC TERM 1643 1506004 - 1505967 - G 85 -16.3 -3.11988 | gap 1, opp_overlap 1505966, overlap 1505966 CCTTATGGAAGAAAC CGAGCACGCCTTCGGCGC CCT GCACC-ACGGCGCGCTCG CTGTTCACGGGCAAG Bphy_1344 1507047 - 1507877 + | hypothetical protein TERM 1644 1507974 - 1507944 - T 77 -8.2 -4.35926 | opp_overlap 1507944, overlap 1507947 AGCCCAAACTGAAAA CCACCTGAAGCAAC GAC GGTGCATCAGGCAG TTTATGGGTGGAAGC Bphy_1345 1509257 - 1508022 - | ZipA FtsZ-binding region TERM 1645 1509096 - 1509125 + g 77 -13.5 -3.30124 | CTCGATGAAGGGGCT CTGCTCGTCCTGG TCCT CCCGGGCGAGCGG TTCTGCCGCATCGGC TERM 1646 1509432 - 1509390 - R 79 -13.3 -3.14211 | ATTCTGTTTCAGCAA CACCTGCACGCGGCCCGGC ATGAG GCCGGACGACGCACGGGTG GACGTTTAAACGATA Bphy_1346 1512956 - 1509438 - | chromosome segregation protein SMC TERM 1647 1510522 - 1510579 + g 81 -16.3 -2.67428 | gap 2, overlap 1510526 GCCATGTTGCGTGCT GCGAAGCGCGCATCGGTGGCGGCGCGG TCGAGC TCGCG-CGC-GCCGTTGCGCGCATTGC TCAGTTCTTCGTCGA TERM 1648 1510526 - 1510575 + g 71 -12.1 -3.25169 | gap 2, overlap 1510522 TGTTGCGTGCTGCGA AGCGCGCATCGGTGGCGGCGCGG TCGAGC TCGCG-CGC-GCCGTTGCGCGCA TTGCTCAGTTCTTCG TERM 1649 1511634 - 1511654 + g 85 -16.9 -3.14344 | overlap 1511627 CTCGGCAAGCTGCAT GCGCAGCTC TTC GAGCTGCGC TTCATCCGGCGCATC TERM 1650 1513096 - 1513051 - R 79 -12.5 -3.33261 | gap 1 CGGCAAGCGGCACAA CGTAGCGCGAGCCCGCTGCG ATTCCGG CGCCGCGG-CGCGCCCTACG CTGCACCGCTGGCCA Bphy_1347 1514124 - 1513123 - | hypothetical protein TERM 1651 1515427 - 1515409 - g 76 -9.5 -4.08216 | overlap 1515392 GCACGTGCGCGAAAA CCGCGCG ATGTA CGCGCAG AAGTTTTCGACCGTG Bphy_1348 1514417 - 1515721 + | aminotransferase class I and II TERM 1652 1515987 - 1515965 - g 71 -7.6 -4.17048 | opp_overlap 1515974 CGTCGCGGAAAAGAA GGATGGCGAC TGG GTCGTCAACC AGTGGTTGAAGAAGG Bphy_1349 1515816 - 1516643 + | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase Bphy_1350 1516643 - 1517014 + | arsenate reductase and related TERM 1653 1517056 - 1517077 + F 100 -13.7 -5.05782 | CCGTACCTATGTTGT TGCCGGCCT TCCT GGGCCGGCA TTTTTTCACCTGAGT Bphy_1351 1517107 - 1518246 + | succinyl-diaminopimelate desuccinylase Bphy_1352 1518262 - 1519149 + | protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific TERM 1654 1519175 - 1519218 + F 100 -25.4 -4.07568 | opp_overlap 1519150, overlap 1519176 1519178 CGGCTGATGGCTGCC TCGCACGACGCACGGTGCCT GTCT GGGCACCGTGCGTCGTGTGC TTTTGGGCGCCCGCA TERM 1655 1519176 - 1519217 + F 100 -28.9 -3.04398 | opp_overlap 1519150, overlap 1519175 1519178 GGCTGATGGCTGCCT CGCACGACGCACGGTGCCT GTCT GGGCACCGTGCGTCGTGTG CTTTTGGGCGCCCGC TERM 1656 1519178 - 1519215 + F 100 -27.9 -3.08032 | opp_overlap 1519150, overlap 1519176 1519175 CTGATGGCTGCCTCG CACGACGCACGGTGCCT GTCT GGGCACCGTGCGTCGTG TGCTTTTGGGCGCCC TERM 1657 1520823 - 1520878 + G 80 -14.8 -3.08812 | opp_overlap 1520823, overlap 1520823 1520853 1520854 ATCGTACGAGATAGA CCGCAGCGAGTATC-GCAACGCGCCG GCGCTG CGGCGCG-TGCTGATGCACGTTGCGC GTTTGTTCGCGCCGA TERM 1658 1520823 - 1520879 + G 95 -14.6 -4.15222 | gap 3, opp_overlap 1520823, overlap 1520823 1520853 1520854 ATCGTACGAGATAGA C-CGCAGCGAGTATC-GCAACGCGCCG GCGCTG CGGCGCG-TGCTGATGCACGTTGCGCG TTTGTTCGCGCCGAT Bphy_1353 1519465 - 1520901 + | phospholipase D/transphosphatidylase Bphy_1354 1521396 - 1520908 - | glutathione peroxidase Bphy_1355 1521523 - 1523463 + | ABC transporter related TERM 1659 1523705 - 1523726 + G 76 -9.3 -4.10161 | opp_overlap 1523695 GAGCACGGCCGACCG CGTGGCGGG ACGC CCCGGCGCG TTTTACCGGCTCGTG Bphy_1356 1523520 - 1524608 + | L-carnitine dehydratase/bile acid-inducible protein F Bphy_1357 1524908 - 1524645 - | hypothetical protein Bphy_1358 1526424 - 1525048 - | DNA repair protein RadA TERM 1660 1525423 - 1525375 - G 80 -14.6 -3.06501 | gap 2, opp_overlap 1525373 1525370 1525372 CACATCCTGATCGAA GCACGCGATGCCTGCGTGCCGGTG CAG CAC-GGCGAGCAG-CATCGCGAGC CGGTTCTGTTCGAGA Bphy_1359 1527590 - 1526499 - | alanine racemase TERM 1661 1527356 - 1527344 - G 72 -3.3 -4.71426 | CCTCCAGCAACAAAA TCGGC CCC GCCCA CCCCAATTCACGCAA TERM 1662 1527664 - 1527680 + H 74 -7.3 -4.33274 | GATCAAGGATTCTGC TAGTCGG GAT TCGACTA TTTTCATGATATAAA Bphy_1360 1527789 - 1529096 + | major facilitator transporter TERM 1663 1529727 - 1529710 - g 71 -9.8 -3.72576 | GCGGTGCTGATGAAA GGCGGC CATCTC GCCGCC ACCGACAGCCCCGAC Bphy_1361 1529176 - 1529982 + | phosphomethylpyrimidine kinase Bphy_1362 1531027 - 1530011 - | hypothetical protein Bphy_1363 1532049 - 1531024 - | phage SPO1 DNA polymerase-related protein Bphy_1364 1532530 - 1532036 - | ribosomal-protein-alanine acetyltransferase Bphy_1365 1533366 - 1532527 - | peptidase M22 glycoprotease TERM 1664 1532972 - 1533005 + g 72 -11 -3.54424 | gap 2, opp_overlap 1532938 1532973, overlap 1532973 TCGAGCGCCGCAAGC ACGCGCGCC-GC-CGA CGGA TCGCGCAGGCGCGCGC TTTCAGCGCATACGA TERM 1665 1532973 - 1533004 + g 75 -14.5 -2.72511 | gap 2, opp_overlap 1532938 1532973, overlap 1532972 CGAGCGCCGCAAGCA CGCGCGCC-GC-CGA CGGA TCGCGCAGGCGCGCG CTTTCAGCGCATACG TERM 1666 1533004 - 1532973 - G 75 -14.5 -2.71364 | gap 2, opp_overlap 1532972 1532973, overlap 1532938 CGAGCGCCGCAAGCA CGCGCGCC-GC-CGA CGGA TCGCGCAGGCGCGCG CTTTCAGCGCATACG Bphy_1366 1533536 - 1533805 + | acyl-CoA-binding protein TERM 1667 1534630 - 1534594 - g 71 -9.9 -3.78934 | opp_overlap 1534596, overlap 1534558 1534595 GCCGCGCGACAACAA TGCCGGCGGCCGCGGCC GCC GTCCGCAGCCGGTCGCA CGTCCGGGCCTGCTG Bphy_1367 1534250 - 1535920 + | DEAD/DEAH box helicase domain-containing protein TERM 1668 1535970 - 1535953 - f 79 -12.7 -3.20494 | opp_overlap 1535953, overlap 1535951 ACTGAATCAGGAAGA CCGACGC TTCG GCGTCGG TTTTTTTTGCCTCGC TERM 1669 1535953 - 1535970 + F 100 -12.7 -5.81412 | opp_overlap 1535953 1535951 ACTGAATCAGGAAGA CCGACGC TTCG GCGTCGG TTTTTTTTGCCTCGC TERM 1670 1536055 - 1536029 - f 80 -5 -5.00616 | TTGCGTCGTAAAAAA TCGTGCTGCGTG GCA CAAGAAGCGCGA TTGCAAGATGGAAAA TERM 1671 1536237 - 1536191 - f 77 -11.7 -3.49951 | gap 2, opp_overlap 1536226, overlap 1536208 TAGACTCTTATATAA GACTTCG-CGAACCGAAA-CGCC TCA GGCGCCCTCGCTTCGTCGAAGCC ACGAGTCCATTCGAA Bphy_1368 1536281 - 1537585 + | isocitrate lyase TERM 1672 1537669 - 1537696 + T 100 -14.8 -4.65933 | opp_overlap 1537670, overlap 1537670 CCTTCGTTTCGGAAA ACGCGCGCCAGT GATC GCTGGCGCGCGG TTTGTTTTGGGGCTA TERM 1673 1537670 - 1537695 + T 100 -18.3 -3.38836 | opp_overlap 1537670, overlap 1537669 CTTCGTTTCGGAAAA CGCGCGCCAGT GATC GCTGGCGCGCG GTTTGTTTTGGGGCT TERM 1674 1537695 - 1537670 - T 100 -17.6 -4.07568 | opp_overlap 1537670 1537669 CTTCGTTTCGGAAAA CGCGCGCCAG TGATCG CTGGCGCGCG GTTTGTTTTGGGGCT Bphy_1369 1538143 - 1537709 - | UspA domain-containing protein Bphy_1370 1539283 - 1538381 - | LysR family transcriptional regulator TERM 1675 1539368 - 1539357 - H 72 -4.4 -4.58773 | opp_overlap 1539357 TTGATGAAAGTAAAA GATC AAGT GATC TTTACCGTCTTTTTT Bphy_1371 1539438 - 1540226 + | haloacid dehalogenase, type II TERM 1676 1540467 - 1540447 - g 84 -14 -3.58037 | opp_overlap 1540453 1540454 CAGCAACTGCTGAAA CTGCGCGC CGAAC GCGCGCAG CGTCTCGACGCCGGC Bphy_1372 1540300 - 1541892 + | malate synthase A TERM 1677 1541990 - 1542024 + T 100 -18.6 -5.00616 | CGGTTGACCGACCGG GATGGCCTGGCGGGCG TCA TGCCTGCTGGGCCATC TTTTTTGGGCGACCC Bphy_1373 1542457 - 1542050 - | AIG2 family protein Bphy_1374 1543004 - 1542510 - | regulator of ribonuclease activity A Bphy_1375 1543158 - 1544042 + | AraC family transcriptional regulator Bphy_1376 1544576 - 1544112 - | GCN5-related N-acetyltransferase TERM 1678 1544747 - 1544714 - R 100 -18.3 -4.19238 | opp_overlap 1544720, overlap 1544720 TCGGGAAGCGCAAAA CAAAAAGCCCGCTGA TATC TCAGCGGGCTTCTCG ATCTGGCGGAGCGGA TERM 1679 1544720 - 1544741 + r 89 -15.9 -3.39327 | opp_overlap 1544714 1544720 AGCGCAAAACAAAAA GCCCGCTGA TATC TCAGCGGGC TTCTCGATCTGGCGG TERM 1680 1544741 - 1544720 - R 100 -15.9 -5.46706 | opp_overlap 1544720, overlap 1544714 AGCGCAAAACAAAAA GCCCGCTGA TATC TCAGCGGGC TTCTCGATCTGGCGG TERM 1681 1545039 - 1545021 - R 100 -12.4 -4.86621 | opp_overlap 1545021 ATCTTTAATGAAAAA GCCCGCTC ACC GAACGGGC TTAATCTGGCGGAGT Bphy_1377 1547046 - 1545637 - | glutamyl-tRNA synthetase TERM 1682 1547160 - 1547112 - H 74 -7.4 -4.4078 | overlap 1547114 GCGCGGCAACGAAAA CG-GTTCGCTTCAGGCGACGGC AACAGCA GCCGGCGGC-GACGCGAACGCG ATAAAAAAGAGAGTG TERM 1683 1547587 - 1547630 + G 71 -13.7 -2.75343 | gap 1, opp_overlap 1547578 1547576, overlap 1547589 ATCAGACCGCAACGC CCGCTGCGCGTCGGCCTCGC ACTCG GCGGCGGCGCCGCGC-GCGG CTTTGCGCATATCGG TERM 1684 1547589 - 1547631 + G 84 -14.1 -3.59262 | gap 1, opp_overlap 1547578 1547576, overlap 1547587 CAGACCGCAACGCCC GCTGCGCGTCGGCCTCGC ACTCGGCG GCGGCGCCG-CGCGCGGC TTTGCGCATATCGGC TERM 1685 1547920 - 1547894 - g 86 -2.8 -5.15969 | overlap 1547896 GCCCAATCGAAAAAA TGGCGAAACCGC TCG GCGTCGTCGCAA CCGATCTGAAAACGG Bphy_1378 1547302 - 1548378 + | patatin TERM 1686 1548431 - 1548408 - T 100 -18.2 -4.2231 | opp_overlap 1548408 AAGCAGTACGTAAAA GGCCCGCTTC GAAC GAAGCGGGCC TTTTGCTTGAAACGG TERM 1687 1548408 - 1548431 + T 100 -18.2 -4.4078 | opp_overlap 1548408 AAGCAGTACGTAAAA GGCCCGCTTC GAAC GAAGCGGGCC TTTTGCTTGAAACGG Bphy_1379 1549135 - 1548464 - | NLP/P60 protein TERM 1688 1549157 - 1549179 + r 86 -8.4 -4.71061 | overlap 1549158 GGTGGTTGGTCTTGG TTATCGCGGG GAA TCCGCGGTAG TTTTTGCCTGTAAAT Bphy_1380 1550917 - 1549298 - | ABC transporter related TERM 1689 1550435 - 1550407 - G 77 -13.1 -3.35813 | overlap 1550391 GCGGACGGCAAGCAA GCGCCATCGCG ATCATCG CGCGCTGGCGC TGCCCGCCCGACAAC TERM 1690 1550547 - 1550565 + g 74 -11 -3.56821 | TCGGCTGCGCCCACG CCGTCGTG CAG CACGATGG TTTCGGCAATCTGCT Bphy_1381 1552017 - 1550914 - | binding-protein-dependent transport systems inner membrane component TERM 1691 1551986 - 1551964 - G 78 -14.1 -3.26471 | CGACGGCGACACGAA CGCGCGCAC CGGCT GCGCGCGCG ACACTTCGGCATCTG Bphy_1382 1553059 - 1552019 - | binding-protein-dependent transport systems inner membrane component Bphy_1383 1555059 - 1553137 - | extracellular solute-binding protein TERM 1692 1554406 - 1554388 - G 79 -10.2 -4.08216 | CCACTTGCGCGAAAA CACGGGCA TGC CGCCCGCG AGCAACGGCAACTCG TERM 1693 1555443 - 1555487 + G 72 -13 -3.14344 | overlap 1555432 AGTCTTGACGGTCTC GTC-CATTCGATCGGCTTCGCG CCG CGCGAAGC-GATCGCAGGCGAC TTCCTCGACGGCATG Bphy_1384 1555179 - 1555970 + | short-chain dehydrogenase/reductase SDR TERM 1694 1556036 - 1556024 - T 100 -10.5 -5.06414 | opp_overlap 1556018 1556024 TGCGCGCAACAAAAA CCGCC CCG GGCGG TTTTTTGCTTTGCGC TERM 1695 1556024 - 1556036 + T 100 -10.5 -5.37593 | opp_overlap 1556024, overlap 1556018 TGCGCGCAACAAAAA CCGCC CCG GGCGG TTTTTTGCTTTGCGC Bphy_1385 1556401 - 1556063 - | hypothetical protein TERM 1696 1556474 - 1556461 - R 70 -4.5 -4.46073 | opp_overlap 1556461 TTCGAATATAACAAA GCGTC GCTT AACGC GTATTTCAACTTTGT TERM 1697 1556770 - 1556750 - R 70 -4 -4.57569 | gap 1, overlap 1556752 TGACGGGGGTAAAAA GACACGCGA AGAC TCGCATG-C AAATTCAGATGCGCA TERM 1698 1556826 - 1556801 - R 100 -16.9 -5.26119 | opp_overlap 1556823 CGCGCAAAAACAAAA CCCCGCAGAGC CGCA GCTCTACGGGG TTCCACCGCCATTTC TERM 1699 1557133 - 1557101 - R 77 -7.8 -4.26792 | gap 1, opp_overlap 1557105 1557107, overlap 1557105 ACACAAACTTGAAAA CAAATGCCTG-TCGC CGCA GCGAACAGGTATTCG TGGCCATCAAGCCTG TERM 1700 1557129 - 1557105 - R 72 -5 -4.69559 | gap 1, opp_overlap 1557105 1557107, overlap 1557101 AAACTTGAAAACAAA TGCCTG-TCGC CGCA GCGAACAGGTA TTCGTGGCCATCAAG Bphy_1386 1558390 - 1557140 - | aspartate kinase TERM 1701 1558312 - 1558328 + g 71 -9.3 -3.7282 | CCTTGTGCCATTTCG CGACGCG CTT CGCGACG TTCTTGATGCGCTCG TERM 1702 1558521 - 1558541 + r 73 -12.5 -2.75294 | overlap 1558520 1558537 GGCGGCGCAGATGCA GCGCGCGTG CAG CACGCGCGG ATTTGCCGGGTTTGC Bphy_1387 1560281 - 1558863 - | tRNA(Ile)-lysidine synthetase TERM 1703 1559481 - 1559516 + g 74 -11 -3.61398 | gap 1, opp_overlap 1559461, overlap 1559463 CGCGCGCTCGTCGTC GAGGGCGAGC-AGCGCG TCG CGCGAGAGCGCGCCCTC TTCTTCGCCACGCGC TERM 1704 1560263 - 1560223 - G 85 -11.8 -4.11484 | gap 1, opp_overlap 1560225, overlap 1560227 GGCAAGGCGCCAAAA GCAAC-GCCGACCGCATCG AGAA CGAGGCGGTCGGCGGATGT GTCAGCGGAGAGAGT TERM 1705 1560225 - 1560260 + g 77 -14.6 -2.87132 | opp_overlap 1560223 1560227 CAAGGCGCCAAAAGC AACGCCGACCGCATCG AGAA CGAGGCGGTCGGCGGA TGTGTCAGCGGAGAG TERM 1706 1560258 - 1560227 - G 100 -21.6 -3.67175 | opp_overlap 1560225, overlap 1560223 AGGCGCCAAAAGCAA CGCCGACCGCATCG AGAA CGAGGCGGTCGGCG GATGTGTCAGCGGAG Bphy_1388 1561298 - 1560327 - | acetyl-CoA carboxylase, carboxyl transferase, alpha subunit Bphy_1389 1562479 - 1561457 - | HhH-GPD family protein TERM 1707 1562208 - 1562224 + g 71 -10.1 -3.60098 | overlap 1562203 CCCGCCAGTTCGGCA GGCAGCG AGC CGTTGCC TTTCAAGTGCGCAGT Bphy_1390 1563924 - 1562527 - | cysteinyl-tRNA synthetase TERM 1708 1564099 - 1564127 + G 77 -4.6 -4.65916 | gap 1, opp_overlap 1564100, overlap 1564100 CGAGTGGCGAAAGAC AGTCTGTG-GTTC GACG GAACGCGCAGACC TTTTGTTAGAATGGG Bphy_1391 1564087 - 1564983 + | TPR repeat-containing protein Bphy_1392 1565066 - 1565647 + | peptidyl-prolyl cis-trans isomerase cyclophilin type Bphy_1393 1565794 - 1566288 + | peptidyl-prolyl cis-trans isomerase cyclophilin type TERM 1709 1566394 - 1566368 - g 79 -10.1 -4.1673 | gap 1, opp_overlap 1566389 CAATGCTGCAAGAAA CG-CCGCTGCGA AGCG TCGCTGCGGGCG TGCCTGGCGAGGGCA TERM 1710 1566389 - 1566432 + G 100 -21.6 -5.38054 | opp_overlap 1566368 1566412 TGCGAAGCGTCGCTG CGGGCGTGCCTGGCGAGGGC AAAC GCCCTCACGCGGCGCGCCCG TTTTTCTTTATCGCC Bphy_1394 1566355 - 1567155 + | UDP-2,3-diacylglucosamine hydrolase Bphy_1395 1568048 - 1567233 - | serine O-acetyltransferase Bphy_1396 1569126 - 1568296 - | RNA methyltransferase Bphy_1397 1569484 - 1570287 + | inositol-phosphate phosphatase TERM 1711 1570308 - 1570321 + F 100 -9.5 -5.72622 | opp_overlap 1570308 TGTTCGGTCTCGAAA GCGGC TCCG GCCGC TTTTTTCTTTATGAG TERM 1712 1571237 - 1571255 + G 70 -13.8 -2.53876 | opp_overlap 1571207, overlap 1571235 GGGCATTGCGATCGG CGCGGCGG CGG CCGCTGCG TGGATTCCGCTGCGC Bphy_1398 1570419 - 1571717 + | major facilitator transporter TERM 1713 1572027 - 1571989 - g 75 -4.4 -4.60487 | gap 1, overlap 1571990 GACGACGCGGAAAAA GCCGCGC-GCCTGCTCG ATCTGA CGCTCACACAGCGCGGC GCATCGGGCGGCAAT TERM 1714 1573820 - 1573836 + G 72 -11.5 -3.54424 | TCGGCAGTTATGTAC CGGCGCG CCG CGCGTCG TTTGGCCCGATCGAC Bphy_1399 1571839 - 1574517 + | DNA mismatch repair protein MutS TERM 1715 1575206 - 1575188 - g 75 -8 -4.21194 | opp_overlap 1575194, overlap 1575189 GCCGAGTATGCAAAA CGCCGCGG CGC CCGCGCCA TCGTCGTGCTGGTGC Bphy_1400 1574504 - 1575733 + | hypothetical protein TERM 1716 1575783 - 1575766 - T 87 -14.1 -3.35438 | CAGTAGATGCGACAA CGGGCGC TCGC GCGCCCG CTTCGGGAACTGCTC Bphy_1401 1576383 - 1575832 - | FKBP-type peptidyl-prolyl cis-trans isomerase 2-like protein TERM 1717 1577519 - 1577506 - g 83 -9.5 -4.35604 | TGAATGGAGAAGAAA GCCGG TTGT CCGGC GTTAAAAAATGGGTG Bphy_1402 1576551 - 1577663 + | cupin 4 family protein TERM 1718 1577714 - 1577698 - T 75 -5.2 -4.70659 | CCGTATAGCGAAAAA TTGTCT GAGAA AGACAA CGTATTGGCCCCGGA TERM 1719 1578274 - 1578239 - T 100 -22.1 -4.07568 | opp_overlap 1578239 1578245, overlap 1578245 GCTTCCCGGGCAAAA GCAAAACGCCACGGA TTTCAG TCCGTGGCGTTTTGC TTTATGTGCCTGCGT TERM 1720 1578239 - 1578274 + T 100 -22.8 -4.06678 | opp_overlap 1578239 1578245, overlap 1578245 GCTTCCCGGGCAAAA GCAAAACGCCACGGAT TTCA GTCCGTGGCGTTTTGC TTTATGTGCCTGCGT TERM 1721 1578245 - 1578268 + T 100 -14.6 -4.65153 | opp_overlap 1578245 1578239, overlap 1578239 CGGGCAAAAGCAAAA CGCCACGGAT TTCA GTCCGTGGCG TTTTGCTTTATGTGC TERM 1722 1578268 - 1578245 - T 100 -13.9 -4.67038 | opp_overlap 1578239 1578245, overlap 1578239 CGGGCAAAAGCAAAA CGCCACGGA TTTCAG TCCGTGGCG TTTTGCTTTATGTGC Bphy_1403 1580750 - 1578477 - | helicase c2 TERM 1723 1578531 - 1578504 - G 74 -5.4 -4.56597 | overlap 1578506 CCGCTCTTCGAAAAA CTCGCGCACGAC GTCC ATCTCGCGCGTG CGCTTGAACGGCGGC TERM 1724 1579231 - 1579251 + g 78 -15.4 -2.71144 | opp_overlap 1579226 GACGTGAAGACCCAT GCGCGCGG CACGC CCGCGCGC TGCTTCGCGAAAATA TERM 1725 1580235 - 1580225 - G 79 -2.4 -5.07486 | TATCGCGAAGAAAAA GCTG ATC CTGC AGGTGCTTCGTGCCC Bphy_1404 1581038 - 1580820 - | hypothetical protein Bphy_1405 1582011 - 1581169 - | lipoprotein TERM 1726 1581730 - 1581744 + g 95 -10 -4.77036 | TTCGTCGCGTTGACG CGCATG CTC CATGCG TTTTTCGTCGTCGAG TERM 1727 1583050 - 1583018 - g 77 -12 -3.58522 | gap 1, opp_overlap 1583042 ACGACTATTCCGAAA CGATCCGCACGGTGC CGTC GCACCGCGC-GCTCG CGCTCTTCCGCGGCC TERM 1728 1583783 - 1583759 - g 70 -2.1 -4.62471 | gap 1, overlap 1583760 1583763 CGGAACTCGTAAAAA TCGA-GCCGA AGGCGA TCGGCGTCGG CCAGTATCAGCATGA TERM 1729 1584631 - 1584667 + G 82 -15.8 -3.16881 | gap 1 GGCGGCGCAGGTGCC CGGGCGCAGCAGTCCCG GTCT CGGGAC-GCCGAGCCCG TTAATGCGATGGCTG Bphy_1406 1582366 - 1584708 + | RNA-binding S1 domain-containing protein Bphy_1407 1586763 - 1584877 - | K potassium transporter TERM 1730 1587030 - 1587011 - R 100 -10.7 -5.08178 | opp_overlap 1587011 AGACATAGACAAAAA CGGAGCC TCGCAG GGCTCCG TTCCATACGGCCGCA Bphy_1408 1587667 - 1587083 - | phosphoribosyltransferase TERM 1731 1587501 - 1587475 - G 74 -11.5 -3.63627 | GCGGCAGATCGTAAA TGCGCGACAGC TGATC GCCGACGCGCA GCCCACCGCGCGCGA Bphy_1409 1589017 - 1587671 - | adenylosuccinate synthase TERM 1732 1587732 - 1587700 - G 73 -9.2 -3.8211 | gap 1, opp_overlap 1587707, overlap 1587730 GGTGACGCAGAAGAA TGGTCTCGTCGCGGT CCGG ACC-CGTCGAAACCA TGTCGATGGGCACGC Bphy_1410 1590378 - 1589227 - | tRNA synthetase class II (G H P and S) TERM 1733 1589698 - 1589647 - G 75 -10.6 -3.85698 | opp_overlap 1589616 1589660 CTGCTGCGCGAGAAA CGCGAGATCGTCGAGCGCGCGTGA GATT TCCGGCGCGTTCGGCAAGCGCGCG CGCGCCTCTTCGAGC TERM 1734 1590617 - 1590598 - R 84 -7.1 -4.77036 | overlap 1590602 1590603 CGCGATCATCAAAAA CGAAGCG GGACGT CGCCTCG TGAGCGACGCCCGAT Bphy_1411 1590837 - 1590646 - | hypothetical protein Bphy_1412 1591795 - 1590881 - | band 7 protein Bphy_1413 1593203 - 1591806 - | HflK protein TERM 1735 1592686 - 1592659 - G 75 -6.8 -4.35116 | opp_overlap 1592676 1592677, overlap 1592661 1592674 TACTGGACAGCAAAA CGGACGTCGACG ATAT CGGCGTCGTGCG TGAGCATCGACGCGT Bphy_1414 1594478 - 1593234 - | GTP-binding proten HflX TERM 1736 1593900 - 1593945 + g 71 -8.1 -4.07568 | gap 1 CACCGACATCGTACG GTTGCG-CGCCCGCGCGCGACG CTG CGTGCCGTGCTGGCGACCCAGC TTTTCGAGCCGCCCC TERM 1737 1594031 - 1594043 + g 77 -4.7 -4.59773 | CGCCGGGACCGCGCA GGCCG ATA CCGCC TTTTTGACGCTCGAG TERM 1738 1594527 - 1594485 - R 81 -11.9 -3.68366 | gap 1, overlap 1594481 GGATGTCAAAATGAA GCGGCCGGGC-AGTGTCGCC TGCG GACGAGGCTCGACCGGCCGC GACGAAGGGTTAGGA Bphy_1415 1594773 - 1594537 - | RNA chaperone Hfq Bphy_1416 1596304 - 1594964 - | small GTP-binding protein TERM 1739 1596366 - 1596386 + r 83 -13.3 -3.54638 | GCGCTGGCAACGCCA TGCGGCCGT TGC ACGGCTGCA TTTGACGAAAATTAT TERM 1740 1596660 - 1596629 - R 85 -10.8 -4.26903 | gap 1, overlap 1596632 1596646 GGGACGCCAGTAAAA CAGCTGC-GGCCGGC AAA GCCGGCCTGCAATCG CCGCACGGCGCCCCC TERM 1741 1596657 - 1596632 - R 76 -13.3 -2.83772 | gap 1, overlap 1596629 1596646 ACGCCAGTAAAACAG CTGC-GGCCGGC AAA GCCGGCCTGCAA TCGCCGCACGGCGCC Bphy_1417 1597865 - 1596705 - | outer membrane assembly lipoprotein YfgL TERM 1742 1597925 - 1597891 - R 83 -13.6 -3.39521 | gap 1, overlap 1597886 TTGATCAAAAGGTAA CGGC-GGGCGTTGCG GCAACG CGCAACGCTCAGCCG CCCAGCGCGTCGAGC Bphy_1418 1598545 - 1597919 - | hypothetical protein TERM 1743 1598067 - 1598049 - G 71 -7.4 -4.15044 | TGCGCGGCTAACAAA TCGCCG CGCCGGT CGGCGA CCACGCCCTTGAACG TERM 1744 1598528 - 1598554 + g 72 -2.9 -4.59376 | opp_overlap 1598545, overlap 1598529 1598530 TTCAATCGATTCTTG TTCGTCGTGGT AACTC ATCGCGACGCG TTTTCCTTTCGTGGT Bphy_1419 1599972 - 1598632 - | histidyl-tRNA synthetase TERM 1745 1599301 - 1599319 + g 74 -2.2 -4.8048 | overlap 1599302 1599303 GGGCGCGTTCTGCGC GACGGCCT GAA GGGCCGGA TTTTTCGTGTCCAGC TERM 1746 1599912 - 1599886 - G 79 -7.2 -4.56597 | opp_overlap 1599900 1599902 CGTCGTTTCGAAAAA CTCCCACAAGCC TGC GTCCTGCGGAAG GATGTCGTTCATGCC Bphy_1420 1601319 - 1600006 - | 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase TERM 1747 1601426 - 1601401 - R 100 -16.1 -4.7629 | opp_overlap 1601418 1601419 GCATGAATTGAAAAA GCGCCGCAGCC CCGA AGCCGCGGCGC ACGCGATTGATTTGC Bphy_1421 1602552 - 1601443 - | XRE family transcriptional regulator TERM 1748 1602142 - 1602122 - G 71 -12.5 -3.25088 | overlap 1602114 1602123 1602125 CCCCAAAGCCACGAA CGACGGCGC GGC GCACCGCCG CCGCCAAGCGACAGC Bphy_1422 1603910 - 1602762 - | radical SAM protein TERM 1749 1603095 - 1603109 + g 74 -11.4 -3.60296 | opp_overlap 1603095 TTCGAAGGTGATGAA GTCGCG CGG CGCGAC TTTCAGATAACGCTG TERM 1750 1603576 - 1603603 + g 76 -9.8 -4.16284 | gap 1, opp_overlap 1603586, overlap 1603577 ACGGCGCATCCAGCC TGCGACGACACGC ACA GCGTGCCG-CGCG TTTCTTCAGGGATGT Bphy_1423 1604444 - 1604019 - | nucleoside-diphosphate kinase Bphy_1424 1604769 - 1605467 + | hypothetical protein TERM 1751 1605520 - 1605558 + T 100 -27.7 -4.72272 | opp_overlap 1605520 GTGGCCGGCCAAAAA CAGAAACGCCCGTGACG CGCCA CGTCACGGGCGTTTCTG TTTTTGCTCCAGCGA TERM 1752 1605558 - 1605520 - T 100 -28.4 -4.56597 | opp_overlap 1605520 GTGGCCGGCCAAAAA CAGAAACGCCCGTGACGC GCC ACGTCACGGGCGTTTCTG TTTTTGCTCCAGCGA Bphy_1425 1606356 - 1605583 - | beta-lactamase domain-containing protein Bphy_1426 1607513 - 1606365 - | putative lipoprotein TERM 1753 1607359 - 1607382 + g 72 -11.6 -3.52539 | overlap 1607360 TCGCTCGGCACGGTC AGCGGCGGCG CGCT CGCCGTCGCC TTGTAATTCACCTTG TERM 1754 1607360 - 1607381 + g 75 -15.1 -2.71041 | overlap 1607359 CGCTCGGCACGGTCA GCGGCGGCG CGCT CGCCGTCGC CTTGTAATTCACCTT TERM 1755 1607630 - 1607591 - R 78 -3.5 -5.0538 | gap 2, overlap 1607612 1607615 CGTCAGTTGAAAAAA TGC-CGGAAG-GCGCCTGA AAAA CCAGACGCTCAGCCGAGCA GCCCTGCCTCGCGCA TERM 1756 1607668 - 1607612 - R 70 -4.3 -4.57341 | overlap 1607591 1607615 AAGGCGCCTGAAAAA CCA-GACGCTCAGCCGAGCAGCCCTGC CTCGC GCAGCGCAGCGCGGACCA-CGTCGTGG TAACGCGCGTCAAGC Bphy_1427 1608528 - 1607620 - | dihydrodipicolinate synthase Bphy_1428 1609188 - 1608571 - | hypothetical protein TERM 1757 1609114 - 1609082 - G 84 -17 -2.79183 | overlap 1609042 1609043 1609103 GCCACGTCGAGCACA GCGCCGCGCGCATC GACCA GATGCGCCCAGCGC TTCACCCAGCGCGAC Bphy_1429 1610390 - 1609188 - | tryptophanyl-tRNA synthetase TERM 1758 1609516 - 1609532 + g 72 -6.5 -4.29829 | ACGCGCGCCGGGTCG GTCGGCA TCG TGCGGAC TTTCTTCGTGATTGT Bphy_1430 1611062 - 1610400 - | peptidase M50 Bphy_1431 1611813 - 1611121 - | Sua5/YciO/YrdC/YwlC family protein Bphy_1432 1612663 - 1611830 - | phosphotransferase domain-containing protein TERM 1759 1611967 - 1611921 - G 100 -15.1 -4.25104 | gap 1, opp_overlap 1611920, overlap 1611922 CCGGCCGCATGAAAA TCGGAC-CCGCGCGATGCCTCG AAAC CGAAGCGCCGCGCGACGTCCGC GTATTCGCGGTACTG TERM 1760 1611966 - 1611922 - G 89 -18.6 -3.14848 | gap 1, opp_overlap 1611920, overlap 1611921 CGGCCGCATGAAAAT CGGAC-CCGCGCGATGCCTCG AAAC CGAAGCGCCGCGCGACGTCCG CGTATTCGCGGTACT Bphy_1433 1613656 - 1612748 - | alpha/beta hydrolase fold protein TERM 1761 1613047 - 1613105 + g 71 -12.5 -3.23216 | gap 3, opp_overlap 1613079 1613081 CATACCCGCCCGTCC CGTCCGGCTT-CGAC-CAGTGCTGCGCG AGAAAA CGGGC-GCGCTGCGGCGCAAGCCGGGCG TTGGTCCTGATGAGA Bphy_1434 1614578 - 1613724 - | hypothetical protein TERM 1762 1614632 - 1614603 - H 86 -4.9 -5.32565 | gap 1, opp_overlap 1614627, overlap 1614605 CAAGCAACGAAAAAA CACACGACGTGCAA TTC TGGCACGGCGCG-G CGCACGCGCGCGCTT TERM 1763 1614631 - 1614605 - H 81 -8.6 -4.27681 | opp_overlap 1614627, overlap 1614603 AGCAACGAAAAAACA CACGACGTGCAA TTC TGGCACGGCGCG GCGCACGCGCGCGCT Bphy_1435 1614779 - 1615303 + | hexapaptide repeat-containing transferase Bphy_1436 1615368 - 1616318 + | Hsp33 protein TERM 1764 1616618 - 1616581 - g 72 -12.7 -3.14132 | gap 1 TTGCCCGCCGATCAA TCCGGCATC-GCGGCGAC GGC GCAACCGCTGACGCCGGA AGAACGCGCCCGCTA Bphy_1437 1616440 - 1616826 + | putative lipoprotein TERM 1765 1616872 - 1616895 + T 100 -18.2 -3.71848 | opp_overlap 1616872 CTCGCCAAAACAAAA GGCGCGGTTC GCAT GAACCGCGCC TTGTTCGTAAGGCCG TERM 1766 1616895 - 1616872 - T 100 -18.2 -5.07652 | opp_overlap 1616872 CTCGCCAAAACAAAA GGCGCGGTTC GCAT GAACCGCGCC TTGTTCGTAAGGCCG Bphy_1438 1617387 - 1616938 - | septum formation initiator Bphy_1439 1618813 - 1617530 - | phosphopyruvate hydratase TERM 1767 1618115 - 1618130 + g 72 -6.8 -4.21275 | gap 1 CAGGACGTCTTCACC GGCGCGG TAG CCG-GCC TTTTCGATCGCTTGC TERM 1768 1618942 - 1618914 - R 86 -16 -2.78384 | opp_overlap 1618912 1618909 TCGGGTTGGAGCACA CGTGCAGCGCCG GACCG CGACGCCGCACG CGTGATTGCATCAGT Bphy_1440 1619807 - 1618953 - | 2-dehydro-3-deoxyphosphooctonate aldolase TERM 1769 1619784 - 1619769 - G 80 -4.6 -4.77036 | opp_overlap 1619769 1619768 1619779 CGCGATCAGGAAAAA CGGCTT GTCG AGGCCG ATTTCGAAATCGCCC Bphy_1441 1621465 - 1619804 - | CTP synthase TERM 1770 1621500 - 1621488 - R 75 -5.5 -4.56597 | TGCTCGCGGGAAAAA CGGAT TAT ACCCG AACGCGTGCTTCCAG TERM 1771 1621562 - 1621580 + r 78 -9.5 -3.9712 | opp_overlap 1621551 CGAACGTGCTTTTCA GCGCGCC CGCGC GGCGTGC TTTCTGCTGCAATGC Bphy_1442 1622408 - 1621614 - | alpha/beta hydrolase fold protein Bphy_1443 1624991 - 1622460 - | DNA internalization-related competence protein ComEC/Rec2 TERM 1772 1623678 - 1623666 - G 93 -3.3 -5.41143 | overlap 1623667 TATCTGCGAAAAAAA GCAGA CCG TCAGC GGTGCGAGCGCGATC Bphy_1444 1625878 - 1625090 - | TatD-related deoxyribonuclease Bphy_1445 1626657 - 1625914 - | lipoprotein releasing system, ATP-binding protein Bphy_1446 1627903 - 1626650 - | LolC/E family lipoprotein releasing system, transmembrane protein TERM 1773 1628687 - 1628723 + G 72 -13 -3.05384 | gap 1 ACGCTGGTATCTGTC CAGCGACGCGTTCGGCA CGCT TGC-GGGCGCGTCGCCG TTACGTGCGAGCGGC TERM 1774 1629269 - 1629291 + G 73 -5.5 -4.43477 | overlap 1629267 1629268 1629266 TCTGCGCAAATTCTG GCGGCGC CGTCTGTTT GCGTCGC TTTTCATTGAATGAA Bphy_1447 1628211 - 1629305 + | hypothetical protein TERM 1775 1629596 - 1629542 - g 77 -11.4 -3.76952 | gap 3, opp_overlap 1629559 GCGATCGAAGGCAAA CGCCGCATGCTGGTCGTCGCCGACTAC GACT GC-GACGGCG-CGACC-GCCTGCGCCG TCGCCGTACGCGGAC TERM 1776 1629729 - 1629687 - g 91 -16.3 -3.55444 | gap 1, opp_overlap 1629689, overlap 1629688 GTCTGACGCCTGAAA TCGTCGGGCTTGCCGCGCAG CGTC CCG-GCGGCAAGCCCGACTT GCTGATCACCGTCGA TERM 1777 1629728 - 1629688 - g 93 -19.8 -2.73124 | gap 1, opp_overlap 1629689, overlap 1629687 TCTGACGCCTGAAAT CGTCGGGCTTGCCGCGCAG CGTC CCG-GCGGCAAGCCCGACT TGCTGATCACCGTCG TERM 1778 1629689 - 1629727 + G 100 -21.1 -3.21416 | gap 1, opp_overlap 1629688 1629687 CTGACGCCTGAAATC GTCGGGCTTGCCGCGCAG CGTC CCG-GCGGCAAGCCCGAC TTGCTGATCACCGTC TERM 1779 1630147 - 1630171 + G 72 -13.5 -3.13475 | opp_overlap 1630115 TTTTCGCGCAGCGGG GCGCGATGCGC GCA GCGCGTCGGGC TTCGATCTGGGCTTC Bphy_1448 1629302 - 1631035 + | single-stranded-DNA-specific exonuclease RecJ TERM 1780 1631159 - 1631192 + F 100 -13.7 -4.41348 | GTTTTGCTGTTGGTC GGCTGGCGTTGCCCC GTGC GGGGCGGCACCTGCC TTTCTTTGCCGCCGC TERM 1781 1632024 - 1632005 - g 81 -9.3 -4.25104 | overlap 1632016 GGCGCGCGAGGAAAA CGACGAG GACACG CTCGTCG CGTGCGAGGAAGACG Bphy_1449 1631751 - 1632830 + | peptide chain release factor 2 TERM 1782 1632841 - 1632869 + F 100 -8.7 -5.0133 | opp_overlap 1632831, overlap 1632842 1632843 TCTAAGGGCAGCGCA CCCGGCGCGGC ACATTCC GCCGCGCCGCA TTTTTTCACCGCCTG TERM 1783 1632842 - 1632868 + F 77 -12.2 -3.60316 | opp_overlap 1632831, overlap 1632841 1632843 CTAAGGGCAGCGCAC CCGGCGCGGC ACATTCC GCCGCGCCGC ATTTTTTCACCGCCT TERM 1784 1632843 - 1632867 + F 86 -15.7 -2.75708 | opp_overlap 1632831, overlap 1632842 1632841 TAAGGGCAGCGCACC CGGCGCGGC ACATTCC GCCGCGCCG CATTTTTTCACCGCC TERM 1785 1633046 - 1633024 - g 71 -7.6 -4.08216 | overlap 1633005 1633025 TGAGCGCCGCGAAAA GTTGCGCGCG CTG CGCGAGCAAG GCGTCGCCTATCCGA TERM 1786 1633888 - 1633835 - g 77 -11.8 -3.68073 | opp_overlap 1633863 GATTTCACGGAACAA CTGATCCGTCA-GGCCGCCGTCGACG CGCT CGGCAAC-GCGGCCATCACGTATCAG GGCCGCGAACTCGAT Bphy_1450 1632938 - 1634476 + | lysyl-tRNA synthetase TERM 1787 1634528 - 1634543 + F 76 -11.8 -3.36671 | ACGGAGGGTTTGCTG GCGCCG TGCA CGGCGC TTCTCCCCTTGCCCT TERM 1788 1634645 - 1634675 + F 90 -7.5 -5.08824 | gap 2, overlap 1634645 1634644 ACTCGCCGAAGCCCG GTGC-C-GGCGCGGC TTA GCCGCTCCCGTGCGC TTTTTTGCGTGAACA Bphy_1451 1634833 - 1635561 + | 17 kDa surface antigen TERM 1789 1635613 - 1635584 - T 100 -19.5 -3.63515 | opp_overlap 1635584 1635588, overlap 1635588 TTTGAGCCGCAAGAA GAAAGGCGACTTC CTCG GAAGTCGCCTTTC TTTTTCAAGCTGCTG TERM 1790 1635584 - 1635613 + T 100 -19.5 -4.60487 | opp_overlap 1635584 1635588, overlap 1635588 TTTGAGCCGCAAGAA GAAAGGCGACTTC CTCG GAAGTCGCCTTTC TTTTTCAAGCTGCTG TERM 1791 1635588 - 1635609 + T 100 -14.5 -4.86385 | opp_overlap 1635584 1635588, overlap 1635584 AGCCGCAAGAAGAAA GGCGACTTC CTCG GAAGTCGCC TTTCTTTTTCAAGCT TERM 1792 1635609 - 1635588 - T 100 -14.5 -4.45068 | opp_overlap 1635588 1635584, overlap 1635584 AGCCGCAAGAAGAAA GGCGACTTC CTCG GAAGTCGCC TTTCTTTTTCAAGCT Bphy_1452 1635833 - 1635636 - | FeS assembly protein IscX Bphy_1453 1636190 - 1635849 - | ferredoxin, 2Fe-2S type, ISC system TERM 1793 1636253 - 1636263 + r 72 -4.6 -4.56597 | GTACCATTTTACTGG TGGC GCG GCCG TTTTTGGCACGCGCC Bphy_1454 1638157 - 1636286 - | Fe-S protein assembly chaperone HscA TERM 1794 1636369 - 1636389 + g 72 -9 -4.05033 | gap 1 ATTCGTCGGTGCCTT CGGCGAGCG TCTT CG-TCGCCG TTTCTATCGCGTCGA TERM 1795 1637180 - 1637192 + g 80 -4.7 -4.72272 | GGCCGTCAGTTTGGC GTCGC GCA GCGCC TTTTTCGTCGGGCCG Bphy_1455 1638776 - 1638249 - | co-chaperone Hsc20 TERM 1796 1638610 - 1638630 + g 71 -7.5 -4.11394 | overlap 1638604 TCGTTCGTGCGGGTC GCCCATTGC ATC GCGATGCGC TTTTGCGCGTCGCCT TERM 1797 1638872 - 1638857 - R 100 -11.8 -5.22039 | opp_overlap 1638857 GCGAAATTGAAAAAA GGCGGC ACAG GCCGCC TTTTCAGCATGACTC TERM 1798 1638857 - 1638872 + r 90 -11.8 -4.11692 | opp_overlap 1638857 GCGAAATTGAAAAAA GGCGGC ACAG GCCGCC TTTTCAGCATGACTC Bphy_1456 1639250 - 1638894 - | iron-sulfur cluster assembly protein IscA Bphy_1457 1639772 - 1639365 - | FeS cluster assembly scaffold IscU Bphy_1458 1641055 - 1639832 - | cysteine desulfurase IscS Bphy_1459 1641649 - 1641125 - | BadM/Rrf2 family transcriptional regulator Bphy_1460 1642288 - 1641761 - | protein tyrosine phosphatase TERM 1799 1641964 - 1642007 + g 73 -9.4 -3.8512 | opp_overlap 1641957 1641988, overlap 1641965 1641995 TCAGCAGACGGATCT TGTCGCGCTGTGCCGGCGGA CAGA TCTGCCTGAGCGCCGCGACG TTCTTGTCGTCCATC Bphy_1461 1642638 - 1642402 - | hypothetical protein TERM 1800 1642819 - 1642801 - H 76 -11.8 -3.40403 | opp_overlap 1642799 CGCCCTCCAGGATAA TCTTTCGG CTC CCGAAAGA AATCCTTACAAAAGC Bphy_1462 1642910 - 1643398 + | hypothetical protein TERM 1801 1643479 - 1643450 - T 100 -18 -4.19624 | opp_overlap 1643450 GATCCGGAAGACAAA GAGGCTGCATCG GGCGAG CGATGCAGCCTC TTTCAATAGCAGCGA TERM 1802 1643450 - 1643479 + T 100 -18 -3.64703 | opp_overlap 1643450 GATCCGGAAGACAAA GAGGCTGCATCG GGCGAG CGATGCAGCCTC TTTCAATAGCAGCGA Bphy_1463 1644929 - 1643517 - | hypothetical protein Bphy_1464 1645708 - 1644986 - | hypothetical protein TERM 1803 1645819 - 1645833 + H 81 -4.2 -5.03314 | overlap 1645820 TCAGATTCGATCGCT TCGAAC GGC GTTCGC TTTTTTCACAATACG Bphy_1465 1645896 - 1646702 + | IclR family transcriptional regulator TERM 1804 1646759 - 1646728 - T 80 -9.4 -4.2123 | opp_overlap 1646730 1646733, overlap 1646733 1646736 TAGCCACGCAATAAA TGCAAGAAGCCCCG CATG CGGGGCTTCTTAGT TTTCGTCGGGTACGC TERM 1805 1646730 - 1646758 + T 95 -14 -4.26903 | gap 1, opp_overlap 1646728 1646733 1646736, overlap 1646733 GCCACGCAATAAATG C-AAGAAGCCCCG CATG CGGGGCTTCTTAG TTTTCGTCGGGTACG TERM 1806 1646754 - 1646733 - T 89 -15.9 -3.38162 | opp_overlap 1646730 1646733, overlap 1646728 1646736 ACGCAATAAATGCAA GAAGCCCCG CATG CGGGGCTTC TTAGTTTTCGTCGGG TERM 1807 1646733 - 1646754 + T 100 -15.9 -3.71672 | opp_overlap 1646733 1646728 1646736, overlap 1646730 ACGCAATAAATGCAA GAAGCCCCG CATG CGGGGCTTC TTAGTTTTCGTCGGG TERM 1808 1646751 - 1646736 - T 83 -11.8 -3.81626 | opp_overlap 1646733 1646730, overlap 1646733 1646728 CAATAAATGCAAGAA GCCCCG CATG CGGGGC TTCTTAGTTTTCGTC Bphy_1466 1647948 - 1646785 - | peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 TERM 1809 1647287 - 1647265 - G 70 -11.2 -3.34398 | overlap 1647263 GCCGCCCGGGAAATA GCGCGACAGC GCA GCCGCCGCAC GGTTTTCCGACGCCA TERM 1810 1648441 - 1648454 + H 74 -2.3 -5.00616 | CGCGAGCCCGTCCGG CTTGG GAGA CCACG TTTTTTGCCGCACCA Bphy_1467 1648719 - 1649303 + | phasin family protein TERM 1811 1649496 - 1649513 + T 100 -8.3 -5.40072 | overlap 1649497 AACAGCGTATCGTTT CCCCGGC TCAG GCCGGGA TTTTTTTGCCCGCCC TERM 1812 1649497 - 1649512 + T 83 -11.8 -3.83561 | overlap 1649496 ACAGCGTATCGTTTC CCCGGC TCAG GCCGGG ATTTTTTTGCCCGCC TERM 1813 1649587 - 1649616 + T 100 -19.3 -3.57462 | opp_overlap 1649587 GACGCCCATGAAAAA CGGCGCGCCCTTC TTCC GAAGGACGCGCCG TTTGCACATGCACTG TERM 1814 1649616 - 1649587 - T 100 -21.5 -4.72986 | opp_overlap 1649587 GACGCCCATGAAAAA CGGCGCGCCCTTC TTCC GAAGGACGCGCCG TTTGCACATGCACTG Bphy_1468 1651723 - 1649666 - | dihydrolipoamide dehydrogenase TERM 1815 1651968 - 1651936 - R 74 -12.8 -2.90723 | gap 1, overlap 1651924 GCAGGTTCAACGAGA GCGCCCGAATGACCG TATC CGATCAT-CGAGCGC TAGCGACACAACCTC Bphy_1469 1653635 - 1651989 - | pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase Bphy_1470 1656417 - 1653718 - | 2-oxo-acid dehydrogenase E1 subunit, homodimeric type TERM 1816 1656630 - 1656645 + H 78 -4 -5.01732 | gap 1 AGTTTGCGCCGAATT GCG-TGA CTT TCATCGC TTTTTTGCGGCAATT TERM 1817 1657277 - 1657312 + G 70 -11.1 -3.35679 | overlap 1657276 1657275 CAAACACCCGTTTAT CGCGACCGCGACTTT CTCGGC ACAGTCGCGGCCGTG TTCTCGATCGAAGGG Bphy_1471 1656683 - 1659208 + | multi-sensor signal transduction histidine kinase TERM 1818 1659565 - 1659543 - g 76 -9.8 -4.1899 | overlap 1659556 GGACTTCATCGAAAA GCCGTTCGAC GAA GCCGAACTGC GCAAGCTGGTCGAGC TERM 1819 1659638 - 1659608 - g 77 -12.4 -3.64822 | AGGCGCGCAGCGAAA GCAGCAGCGTGCAG CAG CAGCGCGCCGCCGC CGAGCGCCTCGGCAA Bphy_1472 1659205 - 1659849 + | two component LuxR family transcriptional regulator TERM 1820 1660145 - 1660125 - f 77 -13.9 -2.8805 | ATCAGTCGCGATACA CGGGCGCCG GAC CGGCGCGCG ATCGCACAACACAGC Bphy_1473 1660202 - 1661512 + | hypothetical protein TERM 1821 1661930 - 1661918 - g 74 -4.7 -4.58395 | overlap 1661920 GCCACGGCCGAAAAA GCGTG CAC CTCGC TGTCGGCGACGGTGA Bphy_1474 1661602 - 1662516 + | hypothetical protein Bphy_1475 1662868 - 1663725 + | methenyltetrahydrofolate cyclohydrolase TERM 1822 1664869 - 1664855 - g 81 -11.4 -4.12188 | opp_overlap 1664864 GCAGTACTCGGAAAA TCGCGC GAT GCGCGA AACGATGTACCGCGC Bphy_1476 1664151 - 1666265 + | oligopeptidase A TERM 1823 1666352 - 1666378 + T 82 -8.6 -4.41494 | overlap 1666339 1666338 1666353 TTCGGGCACACGCGA AGCGGGCTCGGT TTT ACCGAACTCGCC TTTTCATTCGCGATG TERM 1824 1666353 - 1666377 + T 75 -12.1 -3.24414 | overlap 1666339 1666338 1666352 TCGGGCACACGCGAA GCGGGCTCGGT TTT ACCGAACTCGC CTTTTCATTCGCGAT Bphy_1477 1667671 - 1666382 - | amidohydrolase 3 TERM 1825 1666949 - 1666992 + g 71 -9.5 -3.70902 | gap 1 CAGATGCGAACCCGT CACGCGTCCGTGCAGGCCTA GCCGA TGGGCTTGCGCGG-CGAGCG TTTCGATGTGACGCG TERM 1826 1667994 - 1668032 + H 100 -10.9 -5.18355 | opp_overlap 1667994, overlap 1668000 CGGCAGCTTCAAGCA TCCGAAGCCCGCATCGC CTCAA GCGTTGCGGGCTTTTGC TTTTTGCTTTTTGCC TERM 1827 1668000 - 1668026 + H 100 -15.1 -4.81523 | opp_overlap 1667994, overlap 1667994 CTTCAAGCATCCGAA GCCCGCATCGC CTCAA GCGTTGCGGGC TTTTGCTTTTTGCTT Bphy_1478 1668146 - 1668922 + | exodeoxyribonuclease III Xth TERM 1828 1668943 - 1668975 + T 100 -22.8 -3.9941 | opp_overlap 1668943 GGCAGCAAAGACAAA GCGGCTCGATGGCG CATCA CGCCGTCGAGCCGC TTTCGTTGTGCCACA TERM 1829 1668975 - 1668943 - T 100 -21.3 -4.36903 | opp_overlap 1668943 GGCAGCAAAGACAAA GCGGCTCGATGGCGC ATC ACGCCGTCGAGCCGC TTTCGTTGTGCCACA Bphy_1479 1670543 - 1669029 - | nitrogen metabolism transcriptional regulator, NtrC, Fis family TERM 1830 1669622 - 1669582 - G 77 -11.7 -3.72576 | CTCTTCTGCAGGAAA TGGCGCGTGAGCAGCGGAA TGT CTTCGCTGCGCTCGCGCAA CGCAGGCAGACGCAG TERM 1831 1670439 - 1670486 + g 81 -7.6 -4.56597 | gap 1, overlap 1670421 CGCGCCCGCGGCTTC GCGCACGTTCGCGA-AGCTGCGC GTC GCAAAGTTCTCGCGGGCGAGTGC TTTTTCGAGCACCCA Bphy_1480 1671732 - 1670590 - | signal transduction histidine kinase, nitrogen specific, NtrB TERM 1832 1671815 - 1671797 - R 100 -16 -4.88407 | opp_overlap 1671797 CGATCCAACGAAAAA GGGACGGC GCC GCCGTCCC TTCATGACCGATCGC TERM 1833 1671797 - 1671815 + r 88 -16 -3.14931 | opp_overlap 1671797 CGATCCAACGAAAAA GGGACGGC GCC GCCGTCCC TTCATGACCGATCGC Bphy_1481 1673297 - 1671882 - | glutamine synthetase, type I TERM 1834 1672965 - 1672994 + g 84 -14.3 -3.59979 | gap 1, opp_overlap 1672950 CGCTTCCGCGCGCTT GGCGAGCGAGCGCG GGT CGCGCTCG-TAGCC TTTGCCGTCAGCCGG TERM 1835 1673412 - 1673400 - H 70 -4.8 -4.48987 | GCCTCACAAGGAAAA GTGC TTACT GCAC CGCGCCAGTTCGATC Bphy_1482 1673713 - 1674177 + | hypothetical protein TERM 1836 1674239 - 1674268 + T 100 -16.5 -3.94877 | gap 1 GATACGTCTCGAACC GGCGGCGCACG-CA GCA TGTCGTGTGCCGCC TTGTTATTGAACCGT Bphy_1483 1675179 - 1674346 - | molybdopterin binding domain-containing protein Bphy_1484 1676061 - 1675192 - | hypothetical protein TERM 1837 1676047 - 1676028 - G 72 -7 -4.21974 | overlap 1676029 GGAGCACCGAAGAAA GCGCGCGC CCAA ACGAGCGC AAGAGGTCATTCATT TERM 1838 1676268 - 1676298 + r 70 -3.8 -4.57073 | opp_overlap 1676255, overlap 1676266 1676272 AAGGGATCGGGATGC GCGCCGGCGCGC TTACGCC GTGCCCCGCTGC TTTTTGCCGGACATG Bphy_1485 1677263 - 1676280 - | fatty acid hydroxylase TERM 1839 1676568 - 1676532 - G 74 -10.8 -3.72695 | gap 1 ATGGCGTCGATGAAA CGTCGGGCT-GACGAGC AAGC GCTCGCCGAGCCAGCCG AAATACAGCCGGATG Bphy_1486 1678358 - 1677345 - | YVTN beta-propeller repeat-containing protein TERM 1840 1678319 - 1678287 - G 78 -3.2 -4.96848 | gap 1, overlap 1678289 1678305 GGCGGGAGAGAAAAA GCTCGCTGCCGCGAC GAAC GCCGCGCCTGCT-GC AAACGTGCCAGTCAA TERM 1841 1678473 - 1678435 - H 70 -2.1 -4.72272 | gap 1, opp_overlap 1678444, overlap 1678436 TCGGTCGAGGAAAAA TGTGGGCTCGCGGC-GCG CTGC CGCAGACGCGCGCCGGCT CGCTTGCGGGGGGCG TERM 1842 1679221 - 1679168 - g 73 -13.7 -2.90075 | gap 1 CCGTCGGCAACTACA CGACCGCGCTCGGCGCGCACGCGCGT GCG ATG-GCGGGCGCGTCGACAGCGATCG GCGACACCGCACAGG Bphy_1487 1678882 - 1680300 + | YadA domain-containing protein Bphy_1488 1684787 - 1680399 - | ATP-dependent helicase HrpA TERM 1843 1682239 - 1682220 - G 71 -9.2 -3.73647 | opp_overlap 1682218, overlap 1682221 GCCACGGATGAACAA TTCCCGCG CGCG CGCGGGAT CCTGCTTGCCGAAGC TERM 1844 1682318 - 1682328 + g 72 -8.2 -4.11394 | overlap 1682317 CGAATGCCGTCACCT GCGC GGC GCGC TTTTCCCAGTGCGGT TERM 1845 1683761 - 1683789 + g 79 -5.8 -4.67982 | CGACGGGATACAGCC GCCCGCTCACTT CGATC ACGGGCGCGGGC TTTTCTTCGCTGCCG TERM 1846 1684028 - 1683998 - G 75 -7.6 -4.25104 | gap 1, overlap 1683999 TTTCCGCGAGCAAAA TGC-CGTCCGTCA TCAGCT TGACGGACGCGCC GGGCGAGAGATTGTC TERM 1847 1684506 - 1684524 + g 78 -13.8 -3.29461 | overlap 1684496 1684517 1684518 GCCCTGCCGGTCCTG CCGCGCGT TCT GCGCGCGG TTCTCCGCGCGATTC TERM 1848 1684518 - 1684535 + g 70 -14.1 -2.58544 | overlap 1684506 1684517 CTGCCGCGCGTTCTG CGCGCGG TTCT CCGCGCG ATTCTGCGCCTCCCG TERM 1849 1684652 - 1684679 + g 75 -9.8 -3.96624 | overlap 1684654 1684663 1684664 1684665 TCACGGAAACGTCAC TGCGAGGTGCGT TGCC GCGCGCCTCGTG TTTCTCGTGCCGATG TERM 1850 1684654 - 1684677 + g 77 -12.4 -3.57406 | overlap 1684652 1684663 1684664 1684665 ACGGAAACGTCACTG CGAGGTGCGT TGCC GCGCGCCTCG TGTTTCTCGTGCCGA TERM 1851 1684664 - 1684719 + g 88 -16 -3.4268 | gap 1, overlap 1684654 1684652 1684663 1684665 1684713 CACTGCGAGGTGCGT TGCCGCGCGCCTCGTGTTTCTCGTGCC GAT GGC-CGCGCGGCACGGGGTTCGCGGCG TCTTTCGCGTTATCG TERM 1852 1684665 - 1684718 + g 83 -17.3 -2.65126 | gap 1, overlap 1684654 1684652 1684664 1684663 1684713 ACTGCGAGGTGCGTT GCCGCGCGCCTCGTGTTTCTCGTGCC GAT GGC-CGCGCGGCACGGGGTTCGCGGC GTCTTTCGCGTTATC TERM 1853 1684756 - 1684768 + g 81 -9.1 -4.21275 | GCGTTTTTCGTATCG GCTCC AGC GGAGC TTTTGGGTACATTCG TERM 1854 1685369 - 1685404 + G 79 -10.4 -4.07568 | gap 1, overlap 1685369 1685388 ATCCGTCAATCGCTT G-CGAGCGGCAAGATCG TGC TGCTCTCGCCGCTCGGC TTTTCGCCGACGGGC Bphy_1489 1684811 - 1686190 + | amino-acid N-acetyltransferase Bphy_1490 1686246 - 1686521 + | Fe(II) trafficking protein YggX TERM 1855 1686575 - 1686557 - f 70 -11.7 -2.75481 | opp_overlap 1686557 1686570 CTCGAATCCCAACCA TCCGCGC TCGAT GCGCGGA TTTTTTTCGTGTGCA TERM 1856 1686557 - 1686575 + F 100 -11.7 -5.58454 | opp_overlap 1686557, overlap 1686570 CTCGAATCCCAACCA TCCGCGC TCGAT GCGCGGA TTTTTTTCGTGTGCA TERM 1857 1686734 - 1686720 - f 80 -9.2 -4.25104 | opp_overlap 1686722 1686723, overlap 1686697 GCGCGTTGAGCAAAA GCCCGC CCG ACGGGC GATTTGCACGAACCT Bphy_1491 1687264 - 1688733 + | general substrate transporter TERM 1858 1688764 - 1688785 + T 100 -12.3 -5.26316 | opp_overlap 1688758 1688764 CGCACAGGACTGAAA CGGGTCAGC TTCG GCTGATCCG TTTTTTATGGCGTCA TERM 1859 1688785 - 1688764 - T 75 -10.1 -3.70149 | opp_overlap 1688764, overlap 1688758 CGCACAGGACTGAAA CGGGTCAGC TTCG GCTGATCCG TTTTTTATGGCGTCA Bphy_1492 1689272 - 1688790 - | phosphodiesterase Bphy_1493 1690077 - 1689289 - | hypothetical protein TERM 1860 1689520 - 1689497 - G 83 -9.5 -4.43189 | overlap 1689487 1689499 AGCAACGCGACAAAA GGCGCACCG TGCGCG CGCTGCGCC GAGACGGCGAGCACG Bphy_1494 1690656 - 1690081 - | hypothetical protein Bphy_1495 1691104 - 1690772 - | cupin 2 domain-containing protein Bphy_1496 1692529 - 1691126 - | pyridine nucleotide-disulphide oxidoreductase dimerisation region TERM 1861 1691817 - 1691764 - G 100 -15.1 -4.63218 | gap 1, overlap 1691765 CGCTGCCGAAGAAAA TCCGCACGCCGTCGC-CGTCGTGCTG CAA CGGCTCGACGCGCGACGGCTCGCCGC CAAAGCGGAATTCGA TERM 1862 1691816 - 1691765 - G 93 -18.6 -3.3761 | gap 1, overlap 1691764 GCTGCCGAAGAAAAT CCGCACGCCGTCGC-CGTCGTGCTG CAA CGGCTCGACGCGCGACGGCTCGCCG CCAAAGCGGAATTCG Bphy_1497 1692848 - 1692657 - | hypothetical protein Bphy_1498 1693820 - 1693119 - | glutathione S-transferase domain-containing protein Bphy_1499 1693928 - 1694215 + | hypothetical protein TERM 1863 1694612 - 1694588 - f 76 -3.5 -4.99638 | gap 1, overlap 1694589 ATAGCCAGATAAAAA TCCCGCTCAG CGTTAC CTG-GCGGGG TGCATGGCGAATCTT TERM 1864 1694883 - 1694871 - f 80 -4.7 -4.93877 | opp_overlap 1694880 1694881 CGGCAGGAAAGAAAA CGGGC TTG GCTCG GCGTTGCCTCGGCGC TERM 1865 1695187 - 1695160 - f 79 -12.6 -3.36518 | overlap 1695162 CGAAAACGTTTACAA CACCGCGCGGCG GCAA CGCCGCTCGGCA CAGGCTGACGGGAAA TERM 1866 1695185 - 1695162 - f 87 -15.2 -3.24563 | overlap 1695160 AAAACGTTTACAACA CCGCGCGGCG GCAA CGCCGCTCGG CACAGGCTGACGGGA TERM 1867 1695237 - 1695248 + G 72 -7.2 -4.27316 | ATCAAGGATGTCGCT GCCC ACGC GGGC TTTTCGATTGCGACC TERM 1868 1695339 - 1695318 - g 79 -6.5 -4.58395 | overlap 1695320 1695331 GTGACCCTCGAAAAA GTGCGTCAA TCGA TCGACGCGC TCAACTTCCGTCCGA Bphy_1500 1695210 - 1696283 + | LacI family transcription regulator Bphy_1501 1696343 - 1697389 + | extracellular solute-binding protein TERM 1869 1697404 - 1697446 + G 80 -14.9 -3.15841 | gap 2, overlap 1697402 1697442 AACGACATCACTTTT CCGC-TGCGCTGGCGC-ATCG CGT TGATCGCGCCGGCGCTCGCGG TGTTCATCGCGTTCT Bphy_1502 1697386 - 1698210 + | binding-protein-dependent transport systems inner membrane component Bphy_1503 1698216 - 1699154 + | binding-protein-dependent transport systems inner membrane component TERM 1870 1699400 - 1699388 - g 72 -3.3 -4.65895 | opp_overlap 1699374 1699390, overlap 1699389 1699390 CTGCCGATCGAAAAA CGCCA GGT CGGCA TGGTGTTCCAGAGCT Bphy_1504 1699151 - 1700203 + | ABC transporter related Bphy_1505 1700340 - 1701167 + | metallophosphoesterase Bphy_1506 1701294 - 1702508 + | major facilitator transporter Bphy_1507 1703011 - 1702580 - | response regulator receiver protein Bphy_1508 1703754 - 1703044 - | two component LuxR family transcriptional regulator Bphy_1509 1704342 - 1703797 - | Ferritin Dps family protein Bphy_1510 1704600 - 1704439 - | hypothetical protein Bphy_1511 1704869 - 1704693 - | hypothetical protein TERM 1871 1705652 - 1705666 + G 72 -12.8 -3.14132 | opp_overlap 1705647 1705648 1705645 ACAACGAAGAGCGCC GCGCGC AAC GCGCGC TTGATGCGAGCCGCG TERM 1872 1705941 - 1705905 - g 75 -3.7 -4.68645 | opp_overlap 1705927, overlap 1705907 1705936 CAGCGAAAACGAAAA GACCCAGCTCG-CGCGC GAACT GCACGACGAACTCGG-C GCGATTCTCACAGCG TERM 1873 1705940 - 1705907 - g 70 -7.4 -3.94465 | gap 1, opp_overlap 1705927, overlap 1705905 1705936 GCGAAAACGAAAAGA CCCAGCTCG-CGCGC GAACT GCACGACGAACTCGG CGCGATTCTCACAGC Bphy_1512 1705096 - 1706640 + | integral membrane sensor signal transduction histidine kinase Bphy_1513 1706891 - 1707028 + | entericidin EcnAB TERM 1874 1707076 - 1707098 + T 100 -14.8 -4.8048 | CATCACGTACTGCAA GCCGCCGCGT CTG ACGCAGCGGC TTTTTCATGTCGACG TERM 1875 1707149 - 1707124 - T 100 -19.1 -3.82946 | opp_overlap 1707119 CGACGCCAAACACAA CGGCGGCTCAT CCGC ATGAGCCGCCG CGCCGTTTCCCCGTG Bphy_1514 1707988 - 1707200 - | putative lipoprotein TERM 1876 1707967 - 1707981 + g 79 -6.4 -4.54727 | opp_overlap 1707943, overlap 1707943 1707940 CTCCGACGAGCACCG CGATCG TTC TGATCG TTTTCATTTGCCACC TERM 1877 1709431 - 1709396 - g 79 -10.3 -4.10657 | TCACACGTTTCAAAA CCAGCGCGCGACCTG CCTCGT CAATCCGCGCGCGGG CCGCGAGACGGAACT Bphy_1515 1708350 - 1710410 + | NADH:flavin oxidoreductase/NADH oxidase Bphy_1516 1711358 - 1710438 - | hypothetical protein Bphy_1517 1711499 - 1711747 + | hypothetical protein Bphy_1518 1712223 - 1714154 + | thiamine biosynthesis protein ThiC TERM 1878 1714189 - 1714212 + F 100 -11 -5.08011 | opp_overlap 1714184 1714189 TGCCCGGAAAGCGAA GCCCGCCA GTTGTTCA TGGCGGGC TTTTTTGCGCGTTTT TERM 1879 1714212 - 1714189 - f 71 -11 -3.27525 | opp_overlap 1714189, overlap 1714184 TGCCCGGAAAGCGAA GCCCGCCA GTTGTTCA TGGCGGGC TTTTTTGCGCGTTTT Bphy_1519 1714429 - 1714641 + | hypothetical protein TERM 1880 1714801 - 1714839 + F 88 -14.6 -3.5882 | gap 1, opp_overlap 1714798 ACGCCGAAGGGAGAT GGGCAGAGTCCGGCGCG CACGTA CGCGCCGGACA-TGTCC TTTACGGGTGATCTC Bphy_1520 1715037 - 1715639 + | hypothetical protein TERM 1881 1715648 - 1715692 + F 84 -12.9 -3.65812 | gap 2, opp_overlap 1715641 1715644 1715682, overlap 1715627 GCATTGAACGATCGG GCAAGGCGCGCGGTTCGTCGC CCGAT GCTACGAACCG-GCGCCC-GC TTCTATTCCCGCAAC Bphy_1521 1715909 - 1717507 + | L-lactate transport TERM 1882 1717599 - 1717613 + F 72 -8.5 -3.86733 | overlap 1717601 TAAACCGCATCCCCG CCGGC CGGTT GCCGG TTCTTGCTATTTCAT Bphy_1522 1717666 - 1718640 + | hypothetical protein TERM 1883 1719186 - 1719214 + T 100 -16 -4.57569 | opp_overlap 1719186 GCAGGCAACAAAAAA GCCCGCGTAACG CAATC CGTCACGCGGGC TTTTTAGACGGCTGC TERM 1884 1719214 - 1719186 - T 100 -18.2 -5.4833 | opp_overlap 1719186 GCAGGCAACAAAAAA GCCCGCGTAACG CAATC CGTCACGCGGGC TTTTTAGACGGCTGC Bphy_1523 1720484 - 1719252 - | putative exported lipoprotein TERM 1885 1719738 - 1719786 + g 87 -14.6 -3.61715 | opp_overlap 1719745 TTGCGACCCCGCGGG CGACACAGGCGCGACG-GCCGCCG CAT TGGCGGTGCG-CGTGCTCGTGTCG TTCTTCGCCAGCGTC TERM 1886 1719882 - 1719905 + g 72 -3 -4.68593 | gap 1, overlap 1719885 1719885 CGTGTCGTTGTTCGC GCCGCTGAGCG CTT CGCGCAG-GCC TTTTTGGCTGATGAA TERM 1887 1721473 - 1721490 + G 76 -9.1 -4.18197 | gap 1 CGCGCGTGGCTGCCC GCCGC-CG TTC CGAGCGGC TTTTCGCTCGCCGAT Bphy_1524 1721035 - 1721514 + | hypothetical protein TERM 1888 1722646 - 1722672 + G 82 -6.5 -4.65895 | gap 1, overlap 1722648 GGCAACGCTAACGGG GACCGACGGTGC ATCG GCATCG-CGGGC TTTTTCGATCGCCAA Bphy_1525 1721525 - 1722850 + | hypothetical protein TERM 1889 1722930 - 1722897 - T 73 -11.7 -3.14132 | opp_overlap 1722898 CGGTCTTCCTACGAA CGCTGGCGTGCTATC CCGA GACACCACGCCAGCT TTCCAGCCGTGATCA TERM 1890 1722898 - 1722929 + T 81 -13 -3.54741 | opp_overlap 1722897 GGTCTTCCTACGAAC GCTGGCGTGCTATC CCGA GACACCACGCCAGC TTTCCAGCCGTGATC Bphy_1526 1725150 - 1722943 - | YadA domain-containing protein Bphy_1527 1725766 - 1725536 - | hypothetical protein Bphy_1528 1726372 - 1725896 - | hypothetical protein TERM 1891 1726443 - 1726426 - R 71 -8.3 -4.06502 | GACGCGCAAAGCAAA GGCCGCC CGGG GGCGCCC TCGAAGCGACTCATA Bphy_1529 1727238 - 1726471 - | ABC transporter related TERM 1892 1727293 - 1727262 - R 78 -8.6 -4.14243 | gap 1 TACCCGACGTGAAAA GCGCGTGACG-GCCG AAG CGGCGCTCCAGGCGC ACCTGCGCGGACGAC Bphy_1530 1727919 - 1727242 - | polar amino acid ABC transporter, inner membrane subunit Bphy_1531 1728723 - 1727941 - | extracellular solute-binding protein TERM 1893 1728800 - 1728833 + r 70 -5.1 -4.41348 | overlap 1728789 TCTCCCGGACTATGC GTCCGGTTGCGTCGG CGGA CTGTAGCAAACGGGC TTTATTTCCACAACG Bphy_1532 1730655 - 1729204 - | dihydropyrimidinase Bphy_1533 1732199 - 1730688 - | NCS1 nucleoside transporter TERM 1894 1732220 - 1732251 + r 83 -4.4 -5.03314 | gap 1 GTTCTCCACTTGACC GCTCGTTGACTGGGG TGC CCTTA-TCAGCGTGC TTTTTTCAGGCTGCC Bphy_1534 1733567 - 1732257 - | dihydroorotate dehydrogenase family protein Bphy_1535 1734966 - 1733617 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Bphy_1536 1736359 - 1735082 - | amidase TERM 1895 1736541 - 1736558 + H 71 -11.3 -3.29511 | GCGCGCTTTGTGAAT CCTGTCC GAAT GGACAGG TTGTAGCCGACTAAA Bphy_1537 1736756 - 1737460 + | TetR family transcriptional regulator Bphy_1538 1738724 - 1737474 - | benzoyl-CoA oxygenase/reductase, BoxA protein Bphy_1539 1740197 - 1738770 - | benzoyl-CoA oxygenase component B (BoxB) Bphy_1540 1741932 - 1740250 - | benzoyl-CoA-dihydrodiol lyase TERM 1896 1741053 - 1741068 + g 77 -11.8 -3.57263 | CGATATCCAAAGGTT GCGCCG TCGA CGGCGC TTTGGCCGTGAACGT Bphy_1541 1743020 - 1742067 - | XRE family transcriptional regulator Bphy_1542 1743274 - 1743753 + | hypothetical protein Bphy_1543 1743823 - 1745421 + | benzoate-CoA ligase family Bphy_1544 1745430 - 1746284 + | alpha/beta hydrolase fold protein Bphy_1545 1746547 - 1746891 + | hypothetical protein TERM 1897 1747410 - 1747389 - g 81 -3.6 -5.00616 | TGGGTGCCGAAAAAA GGCACGAC GACAAT GGCGTACC TCACACGCGACGACA TERM 1898 1748701 - 1748731 + G 71 -7.5 -4.07568 | GTTCCTACGACTTCA CGGTGCATGGACC GAACG GGTTCCTGCGTCG TTTTGCCGGCAAGCA Bphy_1546 1746966 - 1749080 + | phospholipase C, phosphocholine-specific TERM 1899 1749135 - 1749109 - T 100 -16.6 -4.33105 | opp_overlap 1749109 GAACGATGAGCAAAA GCCCGTATCGTC GTC GACGGTACGGGC TTTTCCTACGCGTCA TERM 1900 1749109 - 1749135 + T 100 -18.8 -4.26076 | opp_overlap 1749109 GAACGATGAGCAAAA GCCCGTATCGTC GTC GACGGTACGGGC TTTTCCTACGCGTCA Bphy_1547 1749875 - 1749171 - | glutathione S-transferase domain-containing protein Bphy_1548 1751049 - 1749979 - | hypothetical protein TERM 1901 1750315 - 1750298 - G 79 -5.5 -4.65895 | overlap 1750300 GGGGCCACGGAAAAA TACGCAC CCGT GCGCGCA CTTCCCAGATGACGC Bphy_1549 1757068 - 1751075 - | excinuclease ABC, A subunit TERM 1902 1752347 - 1752307 - G 95 -15.4 -4.1891 | overlap 1752303 TCGTTGCAAGAGAAA CGGGACGCCGCTCCTGCA ACGGG TGCAGGATCGGCTTCGCG AGGAATTGTCCCGTC TERM 1903 1754320 - 1754303 - G 70 -11.3 -3.36273 | opp_overlap 1754305 1754307, overlap 1754307 CTCGTCGAACATGAA CAGACGC GCTG GCGTCTG CTTCGCGCCACCGCG TERM 1904 1756895 - 1756928 + g 72 -3.1 -4.6902 | gap 1, overlap 1756916 CGGCCCTGTAACCAC CGTC-ATTTCGCCCGT GCG AAGGTCGAGGTCGACG TTTTTCAGGTTGTGC TERM 1905 1757298 - 1757282 - H 100 -9.4 -5.61881 | GCTGAAAAAGAAAAA CCCGGT GGAGA ACCGGG TTCGAATGGCCGTCC TERM 1906 1757853 - 1757833 - g 100 -15.4 -4.25283 | opp_overlap 1757822 1757844 AGCGCTTCATGAAAA CGGGCGGC GCATT GCCGCCCG ACGGCGTCAAGTTGC Bphy_1550 1757763 - 1758047 + | hypothetical protein TERM 1907 1758193 - 1758168 - T 100 -14.1 -4.65895 | opp_overlap 1758168 CCGCGCAGTTAAAAA GGACTTACGGC TTTC ACCGTAAGTCC TTTTTTGTCCATCTG TERM 1908 1758168 - 1758193 + T 100 -13.4 -5.29782 | opp_overlap 1758168 CCGCGCAGTTAAAAA GGACTTACGG CTTTCA CCGTAAGTCC TTTTTTGTCCATCTG Bphy_1551 1758753 - 1758355 - | MerR family transcriptional regulator Bphy_1552 1759161 - 1758808 - | integration host factor, alpha subunit TERM 1909 1758882 - 1758914 + g 70 -5.7 -4.26189 | gap 3, opp_overlap 1758874 CGTGAAACGTCACGA CGCGGCGAGCAGCGAT GGGA ATCGC--CTCGCC-CG TTTTCGGATTTCTGC Bphy_1553 1761705 - 1759273 - | phenylalanyl-tRNA synthetase, beta subunit TERM 1910 1760770 - 1760787 + g 71 -12.7 -2.95223 | TTCGATATGCCGATC GTCGGCG ATCA CGCCGAC TGTCTCGTCGACTTC TERM 1911 1761850 - 1761827 - R 71 -10.2 -3.57144 | CCGCGCATGCTTAAA GCCTGCTCGC TCAA GCGAACTGGC GCAGGAAACGCAGGT Bphy_1554 1762859 - 1761837 - | phenylalanyl-tRNA synthetase, alpha subunit TERM 1912 1762757 - 1762776 + g 79 -10.8 -4.10161 | GTACGCCCGACTTGC CGAGAAAG CGTG CTTTCTCG TTTTCGAGCGTGGTG TERM 1913 1762911 - 1762932 + r 90 -7.2 -5.06816 | opp_overlap 1762912, overlap 1762912 CTCGACCAACAAAAA AGGGGCTC GGTGAG GAGCCCCG TTTTTGTTGCAGCGT TERM 1914 1762931 - 1762912 - R 100 -10.7 -5.5112 | opp_overlap 1762911 1762912 TCGACCAACAAAAAA GGGGCTC GGTGAG GAGCCCC GTTTTTGTTGCAGCG TERM 1915 1762912 - 1762931 + r 71 -10.7 -3.63367 | opp_overlap 1762912, overlap 1762911 TCGACCAACAAAAAA GGGGCTC GGTGAG GAGCCCC GTTTTTGTTGCAGCG Bphy_1555 1763368 - 1763009 - | ribosomal protein L20 Bphy_1556 1763595 - 1763398 - | ribosomal protein L35 Bphy_1557 1764322 - 1763852 - | translation initiation factor IF-3 Bphy_1558 1766334 - 1764427 - | threonyl-tRNA synthetase TERM 1916 1766429 - 1766404 - R 100 -16.1 -5.93809 | opp_overlap 1766399 1766398 CCGGGACAAAAAAAA TGCGGCCCCGC TTTC GAGGGGCCGCA TTCACGTTTCTGCGT Bphy_1559 1769032 - 1766792 - | (p)ppGpp synthetase I, SpoT/RelA Bphy_1560 1769444 - 1769091 - | endoribonuclease L-PSP Bphy_1561 1770468 - 1769548 - | alpha/beta hydrolase fold protein TERM 1917 1770640 - 1770611 - R 100 -19.3 -4.17762 | opp_overlap 1770613 1770628, overlap 1770613 GAGCGCCCAAAAGAA GAGCGGGCGCGAC CTGC GTCGCGCCCGCTT TGCGGCAACCGCACC TERM 1918 1770613 - 1770638 + r 100 -21.9 -3.53012 | opp_overlap 1770611 1770613, overlap 1770628 GCGCCCAAAAGAAGA GCGGGCGCGAC CTGC GTCGCGCCCGC TTTGCGGCAACCGCA TERM 1919 1770638 - 1770613 - R 100 -21.9 -3.68435 | opp_overlap 1770613 1770628, overlap 1770611 GCGCCCAAAAGAAGA GCGGGCGCGAC CTGC GTCGCGCCCGC TTTGCGGCAACCGCA Bphy_1562 1771319 - 1770678 - | 3-oxoacid CoA-transferase, B subunit Bphy_1563 1772026 - 1771322 - | 3-oxoacid CoA-transferase, A subunit TERM 1920 1771993 - 1772007 + g 72 -12.8 -3.09234 | overlap 1771985 TGACGATGCCTTCGA GCGCGG CTG CCGCGC TTGCGTAGACTTTAT Bphy_1564 1772303 - 1772848 + | LuxR family transcriptional regulator Bphy_1565 1773336 - 1772908 - | thioesterase superfamily protein Bphy_1566 1774328 - 1773552 - | short-chain dehydrogenase/reductase SDR TERM 1921 1773976 - 1773966 - G 74 -2.4 -4.72272 | opp_overlap 1773954 1773966 1773966 1773975 CTGCGCGACGAAAAA CGCG CCG CGTG TGTTCGTGTCGAACA Bphy_1567 1774515 - 1776188 + | electron-transferring-flavoprotein dehydrogenase TERM 1922 1776202 - 1776220 + T 100 -16 -4.68593 | opp_overlap 1776202 GAGTTCGACAAAAAA CGCCGCTC GAC GAGCGGCG TTTTTGCGTCATGGC TERM 1923 1776220 - 1776202 - T 100 -16 -5.252 | opp_overlap 1776202 GAGTTCGACAAAAAA CGCCGCTC GAC GAGCGGCG TTTTTGCGTCATGGC Bphy_1568 1777715 - 1776252 - | TPR repeat-containing protein Bphy_1569 1778862 - 1777762 - | chorismate synthase Bphy_1570 1780952 - 1779015 - | phospholipid/glycerol acyltransferase TERM 1924 1780176 - 1780164 - G 76 -9.1 -4.11235 | overlap 1780152 GAACGACGACAGAAA CGTCG CGC CGACG AACCACAACCAGGAA TERM 1925 1780902 - 1780914 + g 71 -10.5 -3.60792 | opp_overlap 1780887 1780864 CTGCGAGCCGTGCTC GCGCG CGC CGCGC TTTGCGCGTTGGACG TERM 1926 1781041 - 1781023 - R 100 -13.1 -5.36441 | GGCGGACACAAAAAA GCGCGCG GATCA CGCGCGC TTCAGGATGATGCAG Bphy_1571 1781607 - 1781110 - | CBS domain-containing protein TERM 1927 1781777 - 1781762 - H 72 -4.6 -4.58685 | overlap 1781766 1781767 AAAGGTCTGCAAAAA GGAAGC GGAC GCCCCC GCCGACAGCGCGCCA TERM 1928 1781816 - 1781766 - H 72 -8.7 -3.80855 | gap 1, overlap 1781762 1781767 GTCTGCAAAAAGGAA GCGGACGCCCCCGCCGACAGCGCG CCAG CGCACGTCCGGCGGGCGGGAC-GC ACGGGCCTGCCCGCG TERM 1929 1782967 - 1783001 + G 74 -13.5 -3.30038 | gap 1, overlap 1782963 1782969 CCGATCACGCGCTCG CCCAGCGCCTGCTGCC GCGC GGC-GCAGGCGCCGTG TTCAGTTTCGATCTG TERM 1930 1782969 - 1782999 + G 83 -14.7 -3.21063 | gap 1, overlap 1782967 1782963 GATCACGCGCTCGCC CAGCGCCTGCTGCC GCGC GGC-GCAGGCGCCG TGTTCAGTTTCGATC Bphy_1572 1781979 - 1783313 + | O-acetylhomoserine/O-acetylserine sulfhydrylase Bphy_1573 1783310 - 1784155 + | alpha/beta hydrolase fold protein Bphy_1574 1784295 - 1784618 + | hypothetical protein Bphy_1575 1785980 - 1784661 - | ribonuclease BN TERM 1931 1785308 - 1785291 - G 76 -6.3 -4.52589 | gap 1 GCGCCGGATATAAAA GCCGAAGC CGC GCTT-GGC CAGTTCGAACGCGAT TERM 1932 1786119 - 1786103 - H 72 -5 -4.57837 | AGACGTGCGCAAAAA CGCGGG ACGAA CTCGCG GCACTGTCGGCGAAC TERM 1933 1786764 - 1786707 - g 88 -15.7 -3.41024 | gap 3, overlap 1786705 CTGCCGAAGAGAAGA CGCTC-GCCATCG-CGC-TCGGTGCGCG GATCG CGCGCACGGCCGCGTCGATGACCGAGCG GCCCTGAGCATGCCG Bphy_1576 1786163 - 1786771 + | flavoprotein WrbA Bphy_1577 1786774 - 1787199 + | hypothetical protein Bphy_1578 1787311 - 1788738 + | FAD linked oxidase domain-containing protein TERM 1934 1789379 - 1789403 + G 76 -9.3 -4.08216 | gap 1 TTACGCATCACGCGC CGCATCGGCG CAGTCT CGCCGA-GCG TTTTGCGGACGATCC Bphy_1579 1788778 - 1789620 + | metallophosphoesterase Bphy_1580 1789801 - 1789640 - | hypothetical protein Bphy_1581 1790907 - 1789969 - | LysR family transcriptional regulator Bphy_1582 1791074 - 1792621 + | RND efflux system outer membrane lipoprotein TERM 1935 1793156 - 1793176 + G 73 -11.8 -3.34398 | overlap 1793154 TCGGCATTCTGTGCT CGGGCGCG GTGAG CGCGCTCG TGTTTCCGCAGCACG Bphy_1583 1792636 - 1794870 + | fusaric acid resistance protein region Bphy_1584 1794860 - 1795060 + | hypothetical protein Bphy_1585 1795078 - 1795938 + | secretion protein HlyD family protein TERM 1936 1795928 - 1795940 + T 85 -3.3 -5.36441 | GTACTGTGGTTGTTA CGCCA TCC TGACG TTTTTTGTCTGCGAC Bphy_1586 1797751 - 1796090 - | methyl-accepting chemotaxis sensory transducer TERM 1937 1796937 - 1796961 + g 93 -15.7 -3.91911 | opp_overlap 1796937 ATGTCGTTCGACAGA TCGCCAGCCGC GAT GCGGCTCGCGA TTTCCTTCGCGTACA TERM 1938 1796961 - 1796937 - G 80 -15.7 -2.87211 | opp_overlap 1796937 ATGTCGTTCGACAGA TCGCCAGCCGC GAT GCGGCTCGCGA TTTCCTTCGCGTACA TERM 1939 1797480 - 1797445 - G 85 -17 -3.01712 | gap 1, opp_overlap 1797418 1797465, overlap 1797448 1797479 TCGTCGCCGTCAATA GC-ATCTTCTGGGCGCG GCT CGCGCGCAGAAGATAGC CGCGCGCTTCCTCGG TERM 1940 1797476 - 1797448 - G 84 -17.5 -2.73875 | opp_overlap 1797465, overlap 1797445 TCGCCGTCAATAGCA TCTTCTGGGCGCG GCT CGCGCGCAGAAGA TAGCCGCGCGCTTCC TERM 1941 1798246 - 1798229 - g 73 -9.8 -3.87075 | opp_overlap 1798227, overlap 1798215 1798230 ACCAGCCTCGACAAA GGCGCC CTGGCT GGCGCC GCTGCTTCGGCTTCC Bphy_1587 1798208 - 1799446 + | major facilitator transporter TERM 1942 1800947 - 1800934 - g 71 -3.7 -4.56597 | GCGTTGCCGCAAAAA CTCGG CTCT CCGGG CGTGCCCTGCTACGG Bphy_1588 1799620 - 1801620 + | propionate--CoA ligase Bphy_1589 1802448 - 1801660 - | adenosylhomocysteine nucleosidase TERM 1943 1801976 - 1801964 - G 83 -9.1 -4.36914 | opp_overlap 1801970 1801974, overlap 1801966 GCTTCCGTCACAAAA CGCTG CGA CAGCG CATCGCCCTCTTCGT Bphy_1590 1804817 - 1802445 - | UvrD/REP helicase TERM 1944 1804916 - 1804945 + H 86 -16.3 -2.73364 | opp_overlap 1804878 1804888, overlap 1804928 CGCGCCGTCTGCCGC CGGGCACGCCCCG ATTG CGCGGCGCGCCCG TGCTTGACATGCGCG TERM 1945 1805018 - 1805000 - H 79 -13.8 -3.17075 | opp_overlap 1805000 1805001 TGTCGGCCAACGCAA CGGCAGGC GCG GCCCGCCG CTCGCGCATCCCCTT TERM 1946 1805156 - 1805135 - g 70 -13.7 -2.62983 | TCGAGCCGCAGACGA TCGAGGCCC AATG GGGCCCCGA ATGGGAAAAACGCGG TERM 1947 1805181 - 1805167 - g 82 -7 -4.66833 | overlap 1805168 CCCGAATGGGAAAAA CGCGGC TAC GCCGCT CCGACGATGGAGCCG Bphy_1591 1805086 - 1807959 + | valyl-tRNA synthetase Bphy_1592 1808032 - 1808913 + | UTP-glucose-1-phosphate uridylyltransferase TERM 1948 1808973 - 1808992 + T 95 -11.4 -4.81249 | opp_overlap 1808973 GCGTGAAGTTGAGAA GCCGTCGC GTCT GTGACGGC TTTTTCAATTTGGGG TERM 1949 1809096 - 1809085 - T 74 -2.2 -4.94243 | gap 1, overlap 1809087 1809088 1809092 GCAAAAAAACCAAAA CAGGC AAC GCC-G CGCCGCAGGCAAAAC Bphy_1593 1809373 - 1809137 - | SirA family protein TERM 1950 1809241 - 1809231 - G 75 -6.8 -4.34771 | overlap 1809232 GAAAACGCAGCAAAA TCCC GCT GGGA GCCGGGATCGGTGGC Bphy_1594 1810506 - 1809484 - | oxidoreductase domain-containing protein Bphy_1595 1811525 - 1810506 - | inositol 2-dehydrogenase Bphy_1596 1812399 - 1811518 - | RpiR family transcriptional regulator TERM 1951 1811841 - 1811876 + g 71 -14.1 -2.78463 | gap 1, opp_overlap 1811838 1811861 GCTCGCGATACATCC CGCCGAAGCCCG-ACA CGAGA TGTACGCGCTTCGGCG TGTGCTGCAACGCGT TERM 1952 1812453 - 1812434 - H 80 -9.2 -4.13767 | TTTTGCAGCGCAAAA GCGCGCCT CGCA AGGCGCTC CGCGGAGCGCACGGG TERM 1953 1812522 - 1812537 + H 78 -3.3 -5.07486 | opp_overlap 1812522 ATTACCGAAAGTAAA TGGAA TGAATT TTCCA TTTTTATTGAACATG Bphy_1597 1812682 - 1813737 + | ABC sugar transporter, periplasmic ligand binding protein TERM 1954 1813794 - 1813813 + F 74 -7.1 -4.37886 | gap 1, overlap 1813770 AGCATCGCGCGACCC CGGCG-GC CCTTT GCACGCCG TTTTGTGCAGAATCG TERM 1955 1814118 - 1814069 - f 83 -13.5 -3.54741 | overlap 1814115 CAGTACGCGCTCAAA GCGCTAACCCGGATCGACCGCAC TGAC GTGCATGGGATCCGAGTAAGCGC TAAAGCGCTAACTCG TERM 1956 1814172 - 1814123 - f 90 -15.7 -3.61764 | overlap 1814115 1814169 CGAGTAAGCGCTAAA GCGCTAACTCGGATCGACCGCAC TGAC GTGCATGGGATCCGAGTAAGCGC TAAAGCGCTAACTCG Bphy_1598 1814207 - 1815364 + | monosaccharide-transporting ATPase Bphy_1599 1815382 - 1816185 + | ABC transporter related TERM 1957 1817173 - 1817204 + G 70 -14.4 -2.63596 | opp_overlap 1817193 GCCGCTCGAAGCGTG CGCGCGCACCGC GAACGCAA GCGGTGCGCTCG TCGTGTCGCGTCACG Bphy_1600 1816232 - 1818244 + | ribokinase-like domain-containing protein TERM 1958 1818322 - 1818347 + G 75 -12.5 -3.48276 | GATGGCACGATCCGT CTGACGGCGGC GCAG GCCGTCGTCCG TTATCTCGCCGCACA TERM 1959 1818536 - 1818508 - g 78 -13.1 -3.44146 | overlap 1818510 CGTGCGCACAACGAA CAGGCGATGGCGC ACA GCGCGATCGCCTT CGCCAAGGCGCACTT TERM 1960 1818534 - 1818510 - g 86 -15.7 -3.29325 | overlap 1818508 TGCGCACAACGAACA GGCGATGGCGC ACA GCGCGATCGCC TTCGCCAAGGCGCAC Bphy_1601 1818241 - 1820190 + | thiamine pyrophosphate protein central region TERM 1961 1820286 - 1820319 + G 90 -16.8 -3.31322 | overlap 1820287 GCGGCGAGACGCCCC TCGATGTCGCGCTC ACGGAA GGGCGCGACATCGG TTATCAGGGGTTCGA TERM 1962 1820287 - 1820318 + G 86 -18.1 -2.58579 | overlap 1820286 CGGCGAGACGCCCCT CGATGTCGCGCTC ACGGAA GGGCGCGACATCG GTTATCAGGGGTTCG TERM 1963 1820559 - 1820580 + G 78 -4.3 -4.72272 | opp_overlap 1820573, overlap 1820560 TTCAGGGCTCGCCCT TGCCGCTGT ATCA ACGGCCGCG TTTTTACTCGGACGA Bphy_1602 1820201 - 1821121 + | xylose isomerase domain-containing protein Bphy_1603 1821118 - 1821924 + | myo-inositol catabolism IolB domain-containing protein TERM 1964 1821934 - 1821979 + T 83 -5.9 -4.88217 | gap 1, overlap 1821934 1821936 1821937 AGTTAGGTTTTTTTG CCTGCGACGCC-AGTCGCCGGT ATT GCCTGCGGCGCGGCGTTGCCTG TTTTGGTTTTTTGCT TERM 1965 1822042 - 1822066 + T 72 -5.6 -4.41348 | GCTTCTGGTTGGCCA GTGTTGCCCC TGTGC GAGGCGGCAC TTTCTTTGCCGCGGC TERM 1966 1822626 - 1822594 - T 73 -3.2 -4.86731 | overlap 1822597 1822598 1822622 CCGCGGCAAAGAAAA GTAGGTGCCGCCCC GCACA GGGGCAACACTGGC CAACCAGAAGCAAAC Bphy_1604 1823560 - 1822847 - | ABC transporter related TERM 1967 1823249 - 1823267 + g 72 -8.8 -4.07885 | opp_overlap 1823223 CTTCACGTCGCGCGG CCTGGTGC CCA GCAGCAGG TTTTCGCGCACGCTG Bphy_1605 1824327 - 1823557 - | ABC transporter related Bphy_1606 1825583 - 1824324 - | inner-membrane translocator TERM 1968 1824747 - 1824726 - G 70 -2.1 -4.60487 | overlap 1824731 GACGACGCTGAAAAA CACCAGCAC CACG GCGCCCGCG ACCGGCCCGAAAAAC TERM 1969 1825001 - 1824955 - G 70 -13.7 -2.62184 | overlap 1824930 1824987 GCCGCGCGCACAGGA TTGTCGCGCACGGCATTCGCG AGCCG CATGAACGGCGTGCGCGACAG CGCGTACATCGCGAT TERM 1970 1825555 - 1825500 - G 80 -15.2 -3.14944 | gap 1 TAGCAGCACACCCAA CGCGGCCCACGGCAGCGCCGCCCGCCA TGT CGACACGTGGCGC-GCAGCGGGCAGCG TGGGGCGCACGTCGA Bphy_1607 1826526 - 1825576 - | inner-membrane translocator TERM 1971 1825635 - 1825606 - G 77 -12.1 -3.61398 | gap 1, opp_overlap 1825629 GCGCTGCCCGAAGAA GCCGCG-TGCACGC ACG GCGAGCATCGCGAC GAGCAGCAGATACGG TERM 1972 1825918 - 1825900 - G 71 -9.5 -3.75024 | TTCGACGACGAACAA GGGCGCG CCGAT CACGCCC GCGAGCGCGGCGAAC TERM 1973 1825988 - 1825965 - G 72 -13.2 -3.06671 | gap 1 AGACCCAGGTGAACA CGCTCGGCACA TCA TG-GCCGAGCG CTTCGACGGCTTGCG TERM 1974 1826373 - 1826354 - G 70 -7.8 -3.96327 | gap 1, overlap 1826355 AGTGCCCACCAGAAA CCCG-CGCG CGC CGCGACGGA AAAACCGACATACGC Bphy_1608 1826982 - 1826530 - | thioesterase superfamily protein Bphy_1609 1828160 - 1827012 - | alcohol dehydrogenase Bphy_1610 1829264 - 1828233 - | threonine aldolase Bphy_1611 1830695 - 1829466 - | hypothetical protein TERM 1975 1830862 - 1830846 - g 76 -9.3 -4.07568 | GGTCGTGCGCGAAAA CGGCGTG ACG CGCGCCG CCGCGAAGCTCAATC TERM 1976 1831563 - 1831616 + G 78 -4.3 -4.73388 | gap 1, opp_overlap 1831553 1831548, overlap 1831583 CGACATCGCCGTGCA TGCGCTCGACGATCTGGGCAGCATCG ATA CGCTGCTGATCTGG-CGGCGCGGGCA TTTTTCGTCAGCGTT Bphy_1612 1830799 - 1831704 + | LysR family transcriptional regulator TERM 1977 1831747 - 1831779 + T 74 -6.2 -4.42386 | opp_overlap 1831751, overlap 1831750 1831751 ATCGATATAAACAAA AAAAGCCGCAAGTC CTATC GACTCGCGGCCTTC TTTTATGCATAAGCG TERM 1978 1831750 - 1831776 + T 77 -7.9 -4.33182 | opp_overlap 1831751, overlap 1831747 1831751 GATATAAACAAAAAA AGCCGCAAGTC CTATC GACTCGCGGCC TTCTTTTATGCATAA TERM 1979 1831751 - 1831775 + T 71 -11.4 -3.19186 | opp_overlap 1831751, overlap 1831750 1831747 ATATAAACAAAAAAA GCCGCAAGTC CTATC GACTCGCGGC CTTCTTTTATGCATA TERM 1980 1831775 - 1831751 - T 100 -13.6 -6.04953 | opp_overlap 1831751 1831750 1831747 ATATAAACAAAAAAA GCCGCAAGTC CTATC GACTCGCGGC CTTCTTTTATGCATA Bphy_1613 1834461 - 1831837 - | alanyl-tRNA synthetase TERM 1981 1832762 - 1832705 - G 72 -13.3 -3.09516 | gap 1, opp_overlap 1832722 GCGTCGACGAGCGAA CCCTTCTGCTGCACATGGCCGCCGAGCA CTT CGCGCAGCG-CCTTGTGCATCAGGTGGG TGGCCGAGTGGTTAC Bphy_1614 1834768 - 1835988 + | L-carnitine dehydratase/bile acid-inducible protein F TERM 1982 1836098 - 1836118 + T 78 -11.1 -3.64822 | opp_overlap 1836076 CGCGAGCGCGTCAGT CGCTCGTGT CGC GCACGGGCG TTTCGCTCACGCCAT Bphy_1615 1836676 - 1836125 - | hypothetical protein TERM 1983 1836718 - 1836706 - R 75 -10.5 -3.64822 | opp_overlap 1836707 ATGCGTTCATGGAAA GCGGC TGC GCCGC CAGCCCTATTGAATC Bphy_1616 1838502 - 1836724 - | gamma-glutamyltransferase TERM 1984 1838261 - 1838226 - G 73 -9.7 -3.91084 | gap 2, opp_overlap 1838246, overlap 1838227 CGAGCGTGAATGAAA CCGCGACGGCGGCATCG ACGG CATTGCCGCC--CGCGG CGAAGATCTGCTGCG TERM 1985 1838533 - 1838517 - H 100 -15.1 -3.96624 | TATCGGCACCAGAAA GCGCGCG CGG CGCGCGC AATGTCGGAAGGAAC Bphy_1617 1838855 - 1839544 + | Ser/Thr protein phosphatase family protein TERM 1986 1839612 - 1839588 - g 79 -6.4 -4.57474 | gap 1, opp_overlap 1839610, overlap 1839590 GCAATCGACAGAAAA CGGCG-GCG GCTCTTCA CGCTCGCCG CGCTGGGCGCAGTAT Bphy_1618 1839561 - 1839938 + | cytochrome c oxidase subunit II Bphy_1619 1840859 - 1839948 - | LysR family transcriptional regulator TERM 1987 1840702 - 1840668 - G 81 -12.1 -3.86346 | gap 1, opp_overlap 1840650 1840650 1840692 GCAGCGTTCGAGAAA CGCCGCGCCTTCTTCG CTCA CGACGA-GGCGCCGCG TCGAGCGGTACATCA TERM 1988 1840929 - 1840939 + H 87 -4 -5.46706 | opp_overlap 1840916, overlap 1840915 AGCCGCGCGGCGCGC GTAT TCC ATAC TTTTTGTTTTGAAAT Bphy_1620 1841045 - 1842820 + | glyoxylate carboligase TERM 1989 1842851 - 1842870 + F 73 -12.2 -3.15544 | opp_overlap 1842866 CTTCACCGGGATGGG TGCGCTTC GCAC GAAGCGCA TTCGTCCGCGTCACG Bphy_1621 1842930 - 1843730 + | hydroxypyruvate isomerase Bphy_1622 1843801 - 1844709 + | 2-hydroxy-3-oxopropionate reductase TERM 1990 1844749 - 1844715 - T 100 -15.7 -3.72576 | overlap 1844719 GGCTGCTTGACGAAA CGAACGCCGCCGTGA CGGGT TCACGGCGGCGCGCA GGTGGGGCGCCTGGT TERM 1991 1844745 - 1844719 - T 100 -19.5 -3.56704 | overlap 1844715 GCTTGACGAAACGAA CGCCGCCGTGA CGGGT TCACGGCGGCG CGCAGGTGGGGCGCC Bphy_1623 1846218 - 1844956 - | L-sorbosone dehydrogenase TERM 1992 1845207 - 1845195 - G 71 -7.7 -4.18018 | opp_overlap 1845194 1845195 GCTCGGCATCGAAAA TACCG CCC CGGTA CTTCTGCGGAAACAT TERM 1993 1845288 - 1845305 + g 72 -8.3 -3.98683 | opp_overlap 1845288 1845286 CGACGGCCGGAAACA CGACGCC CGCC GGCGGCG TTTCGTTCCTGTACT TERM 1994 1846478 - 1846424 - R 70 -4.8 -4.42806 | opp_overlap 1846430, overlap 1846432 1846436 CGATGTTGAAACAAA CGACAGGACGAATGCCTGCACTGCGC GAC GCGCGATACAGGCATCCGGGTCTTCA GGGAGACAGGAACAA TERM 1995 1846470 - 1846432 - R 100 -18.2 -2.76272 | opp_overlap 1846430, overlap 1846424 1846436 AAACAAACGACAGGA CGAATGCCTGCACTGCGC GAC GCGCGATACAGGCATCCG GGTCTTCAGGGAGAC TERM 1996 1846466 - 1846436 - R 82 -14 -3.26834 | opp_overlap 1846430, overlap 1846432 1846424 AAACGACAGGACGAA TGCCTGCACTGCGC GAC GCGCGATACAGGCA TCCGGGTCTTCAGGG Bphy_1624 1847615 - 1846548 - | L-asparaginase, type II TERM 1997 1847639 - 1847625 - R 87 -7.1 -4.87665 | opp_overlap 1847638, overlap 1847627 CGCCATCGATAAAAA CGCGA GCCTG TCGCG CGGCACGCGTTGACT Bphy_1625 1848591 - 1847665 - | LysR family transcriptional regulator TERM 1998 1848699 - 1848648 - R 70 -12.2 -2.71712 | gap 1, opp_overlap 1848656 1848656 1848659, overlap 1848647 TGCCTGGTTCGAAAT GC-GCACGGTGTGCGGCTCAATGTG CCG CTCATTGTGCCGCTCATTGTGCCGC TCAATGTGCCGGAAA TERM 1999 1848656 - 1848690 + r 79 -12.8 -3.31461 | opp_overlap 1848648 1848647, overlap 1848656 1848659 TCGAAATGCGCACGG TGTGCGGCTCAATGTG CCG CTCATTGTGCCGCTCA TTGTGCCGCTCAATG TERM 2000 1848659 - 1848687 + r 73 -13.1 -2.83271 | opp_overlap 1848648 1848647, overlap 1848656 1848656 AAATGCGCACGGTGT GCGGCTCAATGTG CCG CTCATTGTGCCGC TCATTGTGCCGCTCA Bphy_1626 1849758 - 1848700 - | sulfate ABC transporter, ATPase subunit Bphy_1627 1850778 - 1849774 - | sulfate ABC transporter, inner membrane subunit CysW Bphy_1628 1851671 - 1850775 - | sulfate ABC transporter, inner membrane subunit CysT TERM 2001 1851738 - 1851721 - R 88 -14.1 -3.56643 | opp_overlap 1851720 GGCACATTGCCGAAA GCGCGCC CGAG GGCGCGC CTTGCTCAAACTTCG Bphy_1629 1852810 - 1851767 - | sulfate ABC transporter, periplasmic sulfate-binding protein Bphy_1630 1853111 - 1853761 + | LexA family transcriptional regulator Bphy_1631 1853789 - 1854133 + | hypothetical protein TERM 2002 1854144 - 1854121 - f 81 -13.2 -3.53444 | gap 1, opp_overlap 1854119 1854127 CGACCGGTTGGCAAA GCAAGC-GGCG TAA CGCCTGCTTGC AATCTTCGCGGGATC TERM 2003 1854696 - 1854667 - g 90 -15.7 -3.75153 | gap 1, overlap 1854668 CGCCGGGAATGTAAA GCCCGCGCCTGTGC CCG GCTCAGGCGCG-GC GAACGCCAACGGCAC TERM 2004 1854696 - 1854668 - g 80 -15.9 -2.84878 | overlap 1854667 GCCGGGAATGTAAAG CCCGCGCCTGTGC CCG GCTCAGGCGCGGC GAACGCCAACGGCAC Bphy_1632 1854218 - 1854871 + | putative transmembrane protein Bphy_1633 1855363 - 1854899 - | UspA domain-containing protein TERM 2005 1855377 - 1855391 + H 71 -11.4 -3.25919 | overlap 1855381 ATGTCCTTACCCTCC CCGCGA CCA TCGCGG TCTTACTTGCATCAT Bphy_1634 1855625 - 1856539 + | nodulation ABC transporter NodI Bphy_1635 1856583 - 1857410 + | ABC transporter TERM 2006 1857401 - 1857459 + T 70 -12.3 -2.76671 | gap 1, overlap 1857393 1857401 GCTTCGCCGGCGCAT GATGCGC-TAAGGGCGCCGCAGCGCAGT CTGT GCTGCACGGCGGCGCCCTCGGGCAGATC CTTTCAGATCACTCT Bphy_1636 1857890 - 1857468 - | hypothetical protein Bphy_1637 1859201 - 1858137 - | permease TERM 2007 1859136 - 1859120 - G 73 -5.7 -4.42653 | ATTTGACGTAGAAAA GCCCGGC GAC GGCGAGC AGCACGAAAATCGGC TERM 2008 1859344 - 1859316 - R 86 -5.9 -5.09225 | opp_overlap 1859316 1859329 ATGGTATCGAAAAAA GCGGGGCCGAA GCGCGCG TTCTGCCCGGC TTGATGGCGAGCGCG TERM 2009 1859427 - 1859452 + r 87 -16.1 -2.87683 | GCGTTCTGTGGGTGT CGGCGTACCGC CGTC GCGGCACGCCG TGTCTGGCAGCGTGT Bphy_1638 1860532 - 1859480 - | aldo/keto reductase TERM 2010 1859768 - 1859786 + g 71 -13.8 -2.70932 | opp_overlap 1859749 GATGCGCGCGCCTGC CGGGCGCG CCC CGCGCTCG TACTTGCCCGAGAGC TERM 2011 1860216 - 1860239 + g 70 -11.6 -3.31144 | CGGTCGAACTGGTTG CCCTCGCCGC GAAT GTGGCGCGGG TTGTGCGGCTGACGC TERM 2012 1860747 - 1860778 + G 75 -3.6 -4.72272 | gap 1 CGTCGAACGGACGGC CGTCGCTGATCGTGA CGC TCGTGGCC-GCGGCG TTTTTCATGGAGAAC TERM 2013 1861177 - 1861189 + G 75 -10.5 -3.86524 | overlap 1861175 ACCCGTCATCGGACC GCCGC TCG GCGGC TTTATCACGACGTAT Bphy_1639 1860695 - 1862137 + | EmrB/QacA family drug resistance transporter Bphy_1640 1862178 - 1862390 + | putative cytoplasmic protein TERM 2014 1862493 - 1862468 - T 100 -14.1 -5.08255 | opp_overlap 1862468 AGTGCCAAAACAAAA CGGCATTGCGA TTGC TCACAATGCCG TTGCTGGAAATATCT TERM 2015 1862468 - 1862493 + T 73 -11.9 -3.1637 | opp_overlap 1862468 AGTGCCAAAACAAAA CGGCATTGCGA TTGC TCACAATGCCG TTGCTGGAAATATCT Bphy_1641 1863686 - 1862685 - | YjbN family TIM-barrel protein TERM 2016 1863859 - 1863883 + H 77 -12.1 -3.61652 | overlap 1863855 1863860 AGGGCGCGTACACGG TGAACGCCCGC CCG GCGGGCCTTCG TTGATTGTTTCCGAA TERM 2017 1863860 - 1863882 + H 76 -13.4 -2.76509 | overlap 1863859 1863855 GGGCGCGTACACGGT GAACGCCCGC CCG GCGGGCCTTC GTTGATTGTTTCCGA Bphy_1642 1864039 - 1864305 + | hypothetical protein TERM 2018 1864642 - 1864669 + T 100 -17.8 -4.67607 | TGCAGGTGTCGTGCA GCCGGATGTTCC CCAC GGAGCATCCGGC TTTATTTCTTCGGCG TERM 2019 1864713 - 1864699 - T 81 -3.5 -5.18371 | GTCGATAAAATAAAA CGGCT TGCTT AACCG CCCGCCGCCAGCAGT Bphy_1643 1864958 - 1864707 - | hypothetical protein Bphy_1644 1865243 - 1865043 - | hypothetical protein Bphy_1645 1865469 - 1865744 + | hypothetical protein Bphy_1646 1866026 - 1865811 - | TOBE domain-containing protein Bphy_1647 1867077 - 1866085 - | ABC transporter related TERM 2020 1866658 - 1866687 + g 91 -10.7 -4.62471 | gap 1 CTGAAACATGATCCG CGTGTCGAACGGCT GCG AGCCGTCCG-CGCG TTTTTCCAGCTTGCC Bphy_1648 1867925 - 1867074 - | binding-protein-dependent transport systems inner membrane component Bphy_1649 1869133 - 1867976 - | alkanesulfonate monooxygenase Bphy_1650 1869179 - 1869433 + | hypothetical protein TERM 2021 1869554 - 1869569 + F 85 -3.3 -5.47399 | GTCTATGGACCGCGC TCGTT GTTTTG AACGA TTTTTTTGAGCTTAG TERM 2022 1869649 - 1869633 - f 74 -7.9 -4.10657 | overlap 1869623 GCATACGTCGCAAAA GCGCACG GGA CGCACGC CAGCGCACCAGAAGC Bphy_1651 1869754 - 1870173 + | putative transmembrane protein Bphy_1652 1871375 - 1870245 - | enoyl-CoA hydratase/isomerase TERM 2023 1870720 - 1870771 + g 74 -15.1 -2.56596 | overlap 1870717 ACGCACGCCACCACT TCCGCGCCCTGCTCGAACGTCTG CGACTT CAGGCGATCGATCAGCGCGGGGA TGACTTCGTCGGGCA TERM 2024 1871486 - 1871449 - R 100 -18.6 -4.25283 | gap 2, opp_overlap 1871467 1871472 1871482 ACTTGTTCAGTAAAA CCGGC-AGCGCAACG-GG TGGC CCGCGTTGCGCTCGCCGG CCTCGCCGGCTATTG TERM 2025 1871472 - 1871508 + r 81 -11.6 -3.90298 | gap 2, opp_overlap 1871449, overlap 1871467 1871482 GCAACGGGTGGCCCG CGTTGCGC--TCGCCGGC CTC GCCGGCTATTGCGCAGCG TTGTCTTTCGTTGAA TERM 2026 1871482 - 1871496 + r 76 -12.8 -3.02461 | opp_overlap 1871449, overlap 1871472 1871467 GCCCGCGTTGCGCTC GCCGGC CTC GCCGGC TATTGCGCAGCGTTG Bphy_1653 1872242 - 1871496 - | TetR family transcriptional regulator TERM 2027 1872313 - 1872285 - H 88 -11.1 -4.13183 | opp_overlap 1872281 1872285 AAAAGTCAAATTAAA CTGAACATCGTTC ATT GAACAGTGTTCAG TAAATTTCTTGTGCT Bphy_1654 1872370 - 1873350 + | NAD-dependent epimerase/dehydratase Bphy_1655 1873681 - 1873394 - | hypothetical protein TERM 2028 1873762 - 1873776 + r 75 -8.5 -4.00038 | GACAGGCGGCCGACG GCCCG ATCGG CGGGC TTTATGGTACTCGTA TERM 2029 1873924 - 1873952 + r 77 -12.4 -3.57144 | gap 1 TCATGCGCCGTCCAG CAGCCGGTCCACG TACG CGCGG-CCGGCTG TTTCGACATGGACGA Bphy_1656 1874184 - 1873909 - | hypothetical protein TERM 2030 1874113 - 1874141 + g 78 -15.9 -2.66316 | opp_overlap 1874128, overlap 1874111 GCGCAGCGTCTGCTC GTGCGCCGGCACG AAC CGCGCCGACGCAC TGATGTAATAGCCCC Bphy_1657 1874346 - 1874579 + | hypothetical protein Bphy_1658 1874716 - 1875069 + | hypothetical protein Bphy_1659 1875435 - 1875097 - | small multidrug resistance protein Bphy_1660 1875936 - 1875439 - | hypothetical protein TERM 2031 1876312 - 1876342 + H 86 -11.9 -4.07568 | opp_overlap 1876319, overlap 1876319 AAAGTGCCGTCACAC CATGAAACCCGCC CCAAT GGCGGGTTTTTTG TTTTGGAACGCGGCC TERM 2032 1876335 - 1876319 - H 77 -10.8 -3.81951 | opp_overlap 1876312 1876319 CGTCACACCATGAAA CCCGCC CCAAT GGCGGG TTTTTTGTTTTGGAA TERM 2033 1876319 - 1876335 + H 100 -10.8 -5.79595 | opp_overlap 1876319, overlap 1876312 CGTCACACCATGAAA CCCGCC CCAAT GGCGGG TTTTTTGTTTTGGAA Bphy_1661 1876447 - 1876992 + | NUDIX hydrolase Bphy_1662 1877009 - 1877746 + | leucyltransferase Bphy_1663 1877917 - 1878756 + | arginyltransferase TERM 2034 1878819 - 1878835 + F 93 -8.7 -4.77757 | TCGCCGCGCTGCCGA CCCGTTA AAA TAGCGGG TTTTCATTTTTCAGC Bphy_1664 1878867 - 1879901 + | dihydroorotate oxidase Bphy_1665 1880658 - 1879954 - | signal peptidase I TERM 2035 1880111 - 1880081 - G 75 -6.9 -4.41348 | gap 1, opp_overlap 1880089, overlap 1880087 GCGCGTGGAAAGAAA CCGA-AATAGCGCG AATC CGCGCTATCGTCGC GATTGTCGCCGAGCA TERM 2036 1880104 - 1880087 - G 81 -11.3 -3.96542 | opp_overlap 1880089, overlap 1880081 GGAAAGAAACCGAAA TAGCGCG AATC CGCGCTA TCGTCGCGATTGTCG Bphy_1666 1881800 - 1880796 - | oxidoreductase domain-containing protein Bphy_1667 1882669 - 1881923 - | GntR domain-containing protein TERM 2037 1882562 - 1882589 + g 72 -3.3 -4.63932 | gap 1, opp_overlap 1882562 1882561, overlap 1882566 1882568 TTCCTTCGACAATAC GTCCTGCGGCGG CAAGA CCGC-GCCGTAC TTTTCTTCGACGATC TERM 2038 1882598 - 1882648 + g 72 -7 -4.329 | gap 3, overlap 1882600 GCCGTACTTTTCTTC GA-CGATCCC-GGTCA-CGAGGCCA TCCA TGACCTTGCTGACCAGGGACCGCTC TTTGTTGGTGTGTTC TERM 2039 1883788 - 1883753 - g 74 -11.1 -3.65084 | overlap 1883745 AATCAAATCGCGAAA CAGCCGAAACCGCAC TTCACC GCGCGTTCCCGGCTG TGGCACGCCTGAATA Bphy_1668 1883210 - 1883800 + | hypothetical protein TERM 2040 1884181 - 1884159 - f 71 -7.6 -4.07746 | overlap 1884162 GGGTTAAAAAGACAA GAGGTCGTGC CGG GCACGGCTTC ACGCGAGGACCGATC Bphy_1669 1884197 - 1884931 + | Crp/FNR family transcriptional regulator Bphy_1670 1884937 - 1885236 + | hypothetical protein TERM 2041 1885726 - 1885708 - g 76 -6 -4.54323 | AAGCACAACAACAAA CAGTTTTC TTC GAAAGCTG GGCGCGCAAAGAGGC Bphy_1671 1885242 - 1885952 + | 4'-phosphopantetheinyl transferase TERM 2042 1888502 - 1888528 + G 79 -2.1 -5.06451 | opp_overlap 1888490, overlap 1888504 GCACGGCCGATACTC GAGGACGTCGA CCGCT TCGACGCCGGC TTTTTTGGCGTGATG TERM 2043 1888990 - 1888973 - g 84 -12.7 -3.72324 | opp_overlap 1888989 TATCTCTACGAAGAA GGCGGCA TGGG TGCCGCC GACGGCGTGTGCCGT TERM 2044 1896377 - 1896343 - g 80 -12.2 -3.75105 | gap 1 TCAACTCATGAAGAA CGT-GACGGTCGCCG AACTGG CGGCGACCCTCGACG GCACGCAGGAGAACG Bphy_1672 1886459 - 1896466 + | amino acid adenylation domain-containing protein TERM 2045 1896824 - 1896793 - g 75 -7.8 -4.25104 | gap 1, opp_overlap 1896809 GGGCTTCGAGGAAAA GGCCG-CCCTTGCGG AGG CCGAGCGGGTCGGCC GGCTACAGGCCAGCA Bphy_1673 1896470 - 1898800 + | condensation domain-containing protein Bphy_1674 1898820 - 1899974 + | hypothetical protein TERM 2046 1900858 - 1900887 + G 83 -15.1 -3.26471 | gap 1 CGCCCGCATCCGAGG TGGGCGCGTTCGGC GTG GCCGAACG-GCTCA TTGCTGTCGCGCTCA TERM 2047 1901087 - 1901115 + G 88 -11.1 -4.32436 | CGTGATGGGTAACGG CTTTCAGCACG CCGTCAC CGTGCTGAAGG TTTTCGTGCTGGTCT Bphy_1675 1900125 - 1901417 + | polysaccharide biosynthesis protein Bphy_1676 1903196 - 1902093 - | acyltransferase 3 TERM 2048 1902277 - 1902258 - G 82 -6.4 -4.62302 | GAATAGGGCGAAAAA CAGCGC GACACGCA GCGCTG GCCCCACCGACAGAT Bphy_1677 1904354 - 1903257 - | glycosyl transferase group 1 TERM 2049 1903549 - 1903527 - G 72 -8.4 -4.05788 | overlap 1903548 CGGCGGCAAACCAAA CCCTTCCGTC AGG GATGGAAAGG CAAGTGCGCCGGCGT Bphy_1678 1905485 - 1904544 - | glycosyl transferase family protein TERM 2050 1905181 - 1905160 - G 71 -4.4 -4.4767 | overlap 1905161 1905174 TCATGCATCAGAAAA TCGTCGTC CAGAAT GATGACGA CGTCGAAGTCATCCG Bphy_1679 1907129 - 1905729 - | hypothetical protein Bphy_1680 1908406 - 1907189 - | glycosyl transferase group 1 TERM 2051 1907692 - 1907643 - G 72 -11.3 -3.53012 | gap 1 TTGGCGCGCGCGAAA TCCGTCCCGTCGCCGATCACGACG AGG CGCCGCGA-CGGCATCGCGGCGAA GGCCTCGACGATCAG TERM 2052 1907825 - 1907809 - G 71 -13.7 -2.69151 | overlap 1907806 CGGGCGGATAGACGA CGGCAGC GTC GCTGCCG TAAGCCTTGCGGATG Bphy_1681 1909494 - 1908394 - | glycosyl transferase group 1 Bphy_1682 1910769 - 1909783 - | transcription factor jumonji domain-containing protein Bphy_1683 1912024 - 1910951 - | acyltransferase 3 Bphy_1684 1914234 - 1912363 - | FkbH like protein TERM 2053 1914062 - 1914017 - G 81 -15.5 -3.01712 | opp_overlap 1914014 1914017 1914055, overlap 1914027 1914029 TCTGTCGGGGCAACA TCCGGCACAAGATCATGGTAT TTCG ACCCCATGAGCATGTGCCGGA TGCTGTGTCCGCAAT TERM 2054 1914299 - 1914256 - H 72 -5.3 -4.48987 | gap 2, overlap 1914250 1914275 1914277 CCCTCAGAATGAAAA CGTTCCACATCGCGAAGGACA CCTG TGCGCCTCGCGA-G-GGCACG GGTGGGCGCGCACGG Bphy_1685 1914833 - 1915915 + | glycosyl transferase family protein TERM 2055 1917055 - 1917071 + G 75 -4.3 -4.65838 | AGTCGGAGCGGTCGT GGGAACC TTC GGTCTCC TTTTTGGCGTCTATA Bphy_1686 1916390 - 1918156 + | hypothetical protein Bphy_1687 1919608 - 1918217 - | putative calcium binding protein TERM 2056 1920314 - 1920344 + G 86 -6.8 -4.89009 | overlap 1920317 GTTCAACTCGACGAC CGCCGACTTCGGCA ATC TGCTGAAATCGCTG TTTTTCATTCCCTAT Bphy_1688 1920030 - 1921133 + | acyltransferase 3 Bphy_1689 1923914 - 1921680 - | exopolysaccharide transport protein family Bphy_1690 1925260 - 1923974 - | polysaccharide export protein TERM 2057 1925224 - 1925204 - G 89 -18.3 -3.17051 | overlap 1925202 TCGCCACCACGAAGA CAGGCGCGC AGC GCGCGCCTG AGTCCTCCACTGCTC Bphy_1691 1926595 - 1925465 - | exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase TERM 2058 1926322 - 1926273 - G 72 -8.6 -4.14397 | gap 2, overlap 1926268 ATTGCATAAAGCAAA GCCAGCC-CGCAG-AGTTGCACGG CGAG CCATGCAAATGCCGTGCGGCCGGC GACGCTCGCGACGGG Bphy_1692 1927103 - 1926576 - | hypothetical protein TERM 2059 1927287 - 1927275 - R 86 -6.2 -4.93877 | opp_overlap 1927280, overlap 1927276 TTGGAGGAAAGAAAA GCGG AGCAG CCGC GCAGACCGTGCTGGC Bphy_1693 1928090 - 1927395 - | ribose 5-phosphate isomerase TERM 2060 1927717 - 1927765 + g 78 -7.4 -4.37886 | gap 1, overlap 1927720 1927720 AGCACGTCGACGACC TTGCTCGCGTCGGCGATGCAGAG GAAT TTCTCCGCCACCGACGCGA-CGA TTTTCTCGCGCGTGA TERM 2061 1927902 - 1927949 + g 79 -11.1 -3.85698 | gap 1, opp_overlap 1927944 1927945 ACCGTGCGATTGCAG GCGCGCCGTCGTCGCGACCGAG CTGGA CACGG-CGCCGCGAAAGCGCGC TTTGTGCGCGGCGAG Bphy_1694 1929078 - 1928206 - | N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD TERM 2062 1928446 - 1928460 + g 81 -11.4 -4.0031 | GGCGGGCGCATGCGG CTCGCG GCC CGCGAG TTCTTTCGTGACGGT Bphy_1695 1929652 - 1930713 + | acyltransferase 3 Bphy_1696 1931595 - 1930852 - | RNA methyltransferase TERM 2063 1931656 - 1931619 - R 93 -17.7 -3.3482 | CAACCTTTGAATGAA CACGCCGCGATCGTATC GACT GGTCCGATCGCGGCGCG CCCGATGAGAATGAG Bphy_1697 1934182 - 1931729 - | ribonuclease R TERM 2064 1931798 - 1931812 + g 77 -12.8 -3.33696 | overlap 1931792 CGACACCGCCGCCTT GCGCGC CGC GCGCGC TTCCTTCACGGCCGC TERM 2065 1932158 - 1932148 - G 74 -2.4 -4.82901 | GCCCTTCGATAAAAA GCGC GTC GAGC TGCACGAAGATGCCG TERM 2066 1934670 - 1934683 + H 100 -9.5 -4.94972 | opp_overlap 1934669 1934670 AGATTCAAATGAAAG CCGCC TTCG GGCGG TTTTTCGTTGTAGTG TERM 2067 1934945 - 1934927 - H 100 -10.2 -5.00616 | opp_overlap 1934927 CGTCTTTTTAAAAAA GGTCGGCA TTT TGCCGGCC TTTTTTCATTTCTGG TERM 2068 1934927 - 1934945 + H 100 -12.4 -5.42514 | opp_overlap 1934927 CGTCTTTTTAAAAAA GGTCGGCA TTT TGCCGGCC TTTTTTCATTTCTGG TERM 2069 1935026 - 1935005 - H 90 -15.9 -3.54424 | opp_overlap 1934998 1935025 CGTGAGGGCTCGAAA GGCTGCGCT TGCA AGCGCAGCC GGGTCGCGTTGCGTG TERM 2070 1935489 - 1935501 + G 72 -3.4 -4.59944 | ATTTGGGCTGGACAC TCGA CGCAT TCGA TTTCTTTCTGATGGT Bphy_1698 1935431 - 1936654 + | major facilitator transporter TERM 2071 1936681 - 1936708 + F 95 -11.2 -4.8048 | opp_overlap 1936681 GCTGCCGTAGAAAAA GGCTGCTGCCGT TCAT GCGGAAGCGGCC TTTTTCGTGTCCGCC TERM 2072 1936708 - 1936681 - f 87 -8.3 -4.82901 | opp_overlap 1936681 GCTGCCGTAGAAAAA GGCTGCTGCCG TTCATG CGGAAGCGGCC TTTTTCGTGTCCGCC TERM 2073 1937334 - 1937344 + G 77 -4.6 -4.68424 | overlap 1937328 CGCACTATGCGTCCG TCGC CGA GCGG TTTTTCGATGCGTTC TERM 2074 1937421 - 1937438 + G 71 -10.5 -3.56092 | TGCACTTCGCGATCG GCGCGCT GTCG GGCGCGC TTTCGGGCATGCTGG Bphy_1699 1936907 - 1937779 + | TetR family transcriptional regulator Bphy_1700 1937875 - 1940544 + | hypothetical protein TERM 2075 1940708 - 1940739 + G 75 -12.2 -3.53012 | gap 1, overlap 1940710 AACTTCGTCAATTCG CCG-CTGGGCGCGCG GCT CGCGCGCTCGCTCGG TTTGCCGAAGCCCGA TERM 2076 1940710 - 1940735 + G 74 -14.7 -2.64155 | gap 1, overlap 1940708 CTTCGTCAATTCGCC GCTGGGCGCGCG GCT CGCGCGCTC-GC TCGGTTTGCCGAAGC Bphy_1701 1940675 - 1942090 + | short-chain dehydrogenase/reductase SDR Bphy_1702 1942095 - 1943012 + | dehydratase TERM 2077 1944315 - 1944339 + G 75 -12.1 -3.53012 | opp_overlap 1944306, overlap 1944338 AATCAACGTGAACGG CGGATCGCTCG CGA CGGGCCATCCG TTTGCCGCGACGGGC Bphy_1703 1943152 - 1944480 + | acetyl-CoA acetyltransferase Bphy_1704 1944579 - 1946378 + | AMP-dependent synthetase and ligase Bphy_1705 1946804 - 1946412 - | hypothetical protein TERM 2078 1946536 - 1946515 - G 75 -8 -4.2704 | gap 1 GCGAGCACGAAGAAA TCGGCGGCG CGCGT CGC-GCCGA TCAGCGTCAGACGCC Bphy_1706 1948404 - 1946824 - | FAD linked oxidase domain-containing protein TERM 2079 1948299 - 1948334 + g 80 -14 -3.33696 | gap 1 CATACGGTGCGAGAC TCGTCGGCGACGCCGCG ACC TGCG-TGGCGCCGACGA TTGCTTCGAAGGCGG Bphy_1707 1948942 - 1948496 - | putative lipoprotein Bphy_1708 1949987 - 1949193 - | putative transmembrane anti-sigma factor Bphy_1709 1950516 - 1949998 - | ECF subfamily RNA polymerase sigma-24 factor TERM 2080 1950223 - 1950204 - G 81 -7.8 -4.56978 | gap 1 CGGGCAAACAATAAA GCGCG-CGC TGG ACGTCGCGC AACACCAGGCCGTCG Bphy_1710 1950810 - 1950550 - | hypothetical protein Bphy_1711 1951214 - 1951666 + | RNA chaperone Hfq Bphy_1712 1951966 - 1951727 - | hypothetical protein Bphy_1713 1952127 - 1952393 + | hypothetical protein Bphy_1714 1952390 - 1952641 + | hypothetical protein Bphy_1715 1953361 - 1952690 - | putative signal peptide protein Bphy_1716 1953889 - 1954374 + | putative signal peptide protein TERM 2081 1954471 - 1954441 - T 100 -11.8 -5.08824 | opp_overlap 1954441 GCCTGACGTAAAAAA GCCGGCCTGGCA GTCACTT CGCGAGGCCGGC TTTTTATTTTCATTA TERM 2082 1954441 - 1954471 + T 100 -11.1 -5.54338 | opp_overlap 1954441 GCCTGACGTAAAAAA GCCGGCCTGGC AGTCACTTC GCGAGGCCGGC TTTTTATTTTCATTA Bphy_1717 1954966 - 1954514 - | putative transposase protein Bphy_1718 1956221 - 1955124 - | AFG1 family ATPase TERM 2083 1956237 - 1956276 + r 86 -15.7 -2.74563 | opp_overlap 1956241 1956244, overlap 1956244 TTCGTGAGGCAGCAA TGAAGAAGGCGGGAGGG ATTCAA CCCACCCGCCTTCGTCG TGATTCGCGTGTGCC TERM 2084 1956272 - 1956241 - R 93 -17.3 -3.40867 | opp_overlap 1956237 1956244, overlap 1956244 TGAGGCAGCAATGAA GAAGGCGGGAGGG ATTCAA CCCACCCGCCTTC GTCGTGATTCGCGTG TERM 2085 1956269 - 1956244 - R 87 -13.2 -3.83844 | opp_overlap 1956237 1956244, overlap 1956241 GGCAGCAATGAAGAA GGCGGGAGGG ATTCAA CCCACCCGCC TTCGTCGTGATTCGC TERM 2086 1956244 - 1956269 + r 79 -13.2 -3.25015 | opp_overlap 1956244 1956241, overlap 1956237 GGCAGCAATGAAGAA GGCGGGAGGG ATTCAA CCCACCCGCC TTCGTCGTGATTCGC Bphy_1719 1957748 - 1956318 - | dihydrolipoamide dehydrogenase TERM 2087 1957795 - 1957772 - R 84 -16 -2.52464 | gap 1, opp_overlap 1957772 TTTTTGGCTAACCGA CGCG-GCCGCG CTT CGCGGCGCGCG TGGCTTCAGATACTG TERM 2088 1957772 - 1957795 + r 84 -16 -2.54193 | gap 1, opp_overlap 1957772 TTTTTGGCTAACCGA CGCG-GCCGCG CTT CGCGGCGCGCG TGGCTTCAGATACTG Bphy_1720 1959158 - 1957887 - | 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase TERM 2089 1958421 - 1958397 - G 71 -9.3 -3.71848 | opp_overlap 1958397 1958398, overlap 1958398 1958400 CGCCTTCACGAAGAA CGACATGAAGC CAA GCTTCACGCCA TGTTCCTTCTCGAAC TERM 2090 1958472 - 1958508 + g 71 -10.1 -3.56704 | overlap 1958463 1958468 CAGATCCATGACGGG CGCCATGTTCACTTCGT TGA ACGTCGTGAGGATGGCG TTGGTTTGCTGCGAC TERM 2091 1959255 - 1959291 + r 89 -16.6 -3.08778 | opp_overlap 1959268, overlap 1959247 1959260 ATGGGAGATTCAGAC GCGGGGCGGGAAAGCG CACAA CGCTTTCCCGGTTCGC TCTCTGTGGTTATTT TERM 2092 1959260 - 1959286 + r 75 -12.3 -3.18065 | opp_overlap 1959268, overlap 1959255 1959247 AGATTCAGACGCGGG GCGGGAAAGCG CACAA CGCTTTCCCGG TTCGCTCTCTGTGGT Bphy_1721 1962156 - 1959301 - | 2-oxoglutarate dehydrogenase, E1 subunit TERM 2093 1962351 - 1962337 - R 78 -11.4 -3.66178 | opp_overlap 1962337 1962336 1962326 GCCCCCAACCGGAAA CCCCGT GCT ACGGGG CTTTGCGGCAAGTTT TERM 2094 1962504 - 1962452 - R 100 -11.4 -5.68039 | gap 1, opp_overlap 1962471, overlap 1962453 1962457 1962471 AAACGCACAAAAAAA CGCAAGCGCCATGCAAAAAGCCGCC CGAG GGCGGCTTTTTGC-TGAGACTTCTG ACGATAGTCTGGAAG TERM 2095 1962502 - 1962453 - R 86 -12.4 -3.98383 | gap 2, opp_overlap 1962471, overlap 1962452 1962457 1962471 AACGCACAAAAAAAC GCAAGCGCCATGCAAAAAGCCGCC CGAG GGCGGCTTTTTGC-TGAGACTT-C TGACGATAGTCTGGA TERM 2096 1962499 - 1962457 - R 88 -14.3 -3.60657 | gap 1, opp_overlap 1962471, overlap 1962453 1962452 1962471 CACAAAAAAACGCAA GCGCCATGCAAAAAGCCGCC CGAG GGCGGCTTTTTGC-TGAGAC TTCTGACGATAGTCT TERM 2097 1962471 - 1962486 + r 100 -11.8 -4.73388 | opp_overlap 1962457 1962453 1962452 1962471 AGCGCCATGCAAAAA GCCGCC CGAG GGCGGC TTTTTGCTGAGACTT TERM 2098 1962486 - 1962471 - R 100 -11.8 -4.66163 | opp_overlap 1962471, overlap 1962457 1962453 1962452 AGCGCCATGCAAAAA GCCGCC CGAG GGCGGC TTTTTGCTGAGACTT Bphy_1722 1964358 - 1962532 - | GTP-binding protein TypA TERM 2099 1964893 - 1964857 - g 76 -9.5 -4.13767 | gap 2 GTCGCCAGCGGAAAA TGCC-TGCTCGCG-GCC GAACT GGCGCGCGAGTACGGCA TCGACGCCAGCGCGG Bphy_1723 1964674 - 1965189 + | MarR family transcriptional regulator TERM 2100 1965777 - 1965759 - g 75 -3.1 -4.72272 | gap 1, overlap 1965761 GTGTCGCAGGAAAAA GC-TGCCG AAGC CGACATGC AGCAGGCCCGCGTGA Bphy_1724 1965222 - 1966769 + | RND efflux system outer membrane lipoprotein TERM 2101 1967358 - 1967322 - g 70 -5.7 -4.24342 | overlap 1967323 1967349 TCTCGCAGGAAGAAA TCTCCCACGCTCGCGAC GCC GTCAAGAGCGCGCAAGC CGCGCTCGACGCTGC Bphy_1725 1966850 - 1968070 + | efflux pump membrane protein Bphy_1726 1968109 - 1969674 + | EmrB/QacA family drug resistance transporter TERM 2102 1969922 - 1969964 + T 71 -11.3 -3.21099 | gap 2, opp_overlap 1969922 1969923, overlap 1969923 1969927 1969930 GCGCCGACGAGACAA TGCGACAGCCTGCACCCGGTT TGC ACCCGGG-GC-GGCTGTTGCC TTCCTCGTGAGACGG TERM 2103 1969923 - 1969963 + T 78 -14.8 -2.52516 | gap 2, opp_overlap 1969922 1969923, overlap 1969922 1969927 1969930 CGCCGACGAGACAAT GCGACAGCCTGCACCCGGTT TGC ACCCGGG-GC-GGCTGTTGC CTTCCTCGTGAGACG TERM 2104 1969963 - 1969923 - T 73 -12.6 -2.72471 | gap 2, opp_overlap 1969923 1969922 1969927 1969930, overlap 1969922 CGCCGACGAGACAAT GCGACAGCCTGCACCCGGTT TGC ACCCGGG-GC-GGCTGTTGC CTTCCTCGTGAGACG TERM 2105 1970171 - 1970113 - T 78 -2.9 -5.14563 | gap 1, opp_overlap 1970150, overlap 1970114 1970162 TGCCGGAGCAAAAAA CCGCCCGCCCAGGCGCTAGCTCACGA TGAGACGC TCGGGCGCCAGCACACCGTC-GGCGG CTTTCGCGACGCCAA Bphy_1727 1971057 - 1970128 - | tRNA pseudouridine synthase B Bphy_1728 1971512 - 1971081 - | ribosome-binding factor A TERM 2106 1971604 - 1971570 - R 100 -15 -5.01422 | gap 1, opp_overlap 1971570 CGATACAAAAACAAA GGGGCGGAACCGGGC TTCAGC GCCCG-CCCCGCCCC TCATGTGCACGACGC Bphy_1729 1974522 - 1971625 - | translation initiation factor IF-2 TERM 2107 1973554 - 1973611 + g 87 -15.3 -3.61398 | gap 1 CTTCTTCTTGTCGCC GCCGGGACCCGCTGGCTGCGTCGTCGCC GCC GGTTGCGCCGCTGCT-GCGGGCGCCGGC TTCTTCGCGGCCGGA TERM 2108 1973762 - 1973810 + g 91 -15.2 -3.84648 | gap 1 GGCGTGTTCATCATC TCGCGGATCGCGCGTGCCTCGGC TTCC GCCTTGGCGCG-GCGCTTCGCGA TTTCCTCCTGTTCGA TERM 2109 1973952 - 1973989 + g 77 -12 -3.63569 | gap 1, overlap 1973949 1973984 GCTCGGCCTGCTCGC GCGCCGCCGCGGCTG CTTCGGCCA CAGCCGCTGCG-CGC TTCTTAGCCGCTTCC TERM 2110 1974445 - 1974479 + g 70 -5.8 -4.3208 | gap 2, overlap 1974446 TTTCTGGACGCCCGC CGCCTGCAG-C-TGCT CGAGC AGCACGCCTGCAGGCA TTTTCAGTTCTGCGG Bphy_1730 1976094 - 1974619 - | NusA antitermination factor TERM 2111 1975153 - 1975183 + g 77 -4.7 -4.71426 | gap 1 AGCGACGGCCAGTTC GCTTTCG-TCGACG ACGA CGTCCATCGAATGC TTTTCTTCATCGACG Bphy_1731 1976549 - 1976091 - | hypothetical protein TERM 2112 1976688 - 1976674 - R 100 -11.4 -6.07627 | opp_overlap 1976674 1976671 1976669 AGCGGCAAAAAAAAA TGGGCG AAA CGCCCA TCATCTTATTGCCGG TERM 2113 1976845 - 1976881 + r 73 -12.3 -3.05816 | opp_overlap 1976832 1976844, overlap 1976832 1976831 AAGGCTTGAAACAGG CCATTTCGTGCAGTCTG GCG CAGTCTGCGAGAGATGG TTCGCTGGCGGATGC TERM 2114 1976933 - 1976961 + r 83 -14.5 -3.15544 | GCGATGCAGTCGAAC TCGGCGGCGGC TACGGGC GCCGCCGCCGC TTCGTGACGATCAGC Bphy_1732 1978765 - 1976972 - | pseudouridine synthase TERM 2115 1977180 - 1977209 + g 77 -12.7 -3.36273 | ACATCGCGGCCACCC CGGCCGCCACGGC CTTC GCCGCGGTTGCCG TTCGTATTGCCGAAG Bphy_1733 1979908 - 1978826 - | segregation and condensation protein B TERM 2116 1980214 - 1980178 - R 73 -11.4 -3.41602 | gap 1, opp_overlap 1980169 1980185 1980190, overlap 1980181 TCGAGCCCAGCATAA CGACCCGGCGCGCCGCG GGTT CG-GGCGCGCCTGGACC TGCGCTAGCTTTGCC TERM 2117 1980211 - 1980181 - R 87 -16.1 -2.86449 | gap 1, opp_overlap 1980169 1980185 1980190, overlap 1980178 AGCCCAGCATAACGA CCCGGCGCGCCGCG GGTT CG-GGCGCGCCTGG ACCTGCGCTAGCTTT Bphy_1734 1981451 - 1980219 - | aminotransferase class I and II TERM 2118 1981257 - 1981224 - G 73 -5.7 -4.38712 | overlap 1981226 GTTATGCGTATAAAA CGTCGCGCCCAGCGC AAGT GCGGCGCTCGCGGCG TCGCGGATGAACGTC Bphy_1735 1982461 - 1981559 - | LysR family transcriptional regulator TERM 2119 1982570 - 1982559 - H 81 -3.6 -5.1675 | opp_overlap 1982566 CGACGCAGCAAAAAA GCGC AGAC GCAC GCGGGGCGGGCCTCG Bphy_1736 1982880 - 1983278 + | putative transposase A protein TERM 2120 1983291 - 1983321 + F 100 -16.1 -4.56597 | gap 1, overlap 1983308 TGACCATGCACTCTA CGCTTCCGGGCGCC CAAG GGCGCCCGGC-GCG TTTTTGAGGCCGGCA Bphy_1737 1983621 - 1983938 + | hypothetical protein TERM 2121 1984073 - 1984095 + T 100 -13.5 -5.53991 | AAGTAATTCCGGTAT GCCCGTATC CTCGC GATACGGGC TTTTTTTCGTCCATG Bphy_1738 1984562 - 1984248 - | hypothetical protein TERM 2122 1984307 - 1984292 - G 79 -2.6 -5.00616 | gap 1 CTGCGCCGGAAAAAA CGTAATG ATG CAT-ACG GCGCGCGTCCCAGTC TERM 2123 1984380 - 1984346 - G 75 -12 -3.53012 | opp_overlap 1984356 GCTCGTCGCGCGAAA GCCGCGCGAACTCGGC GCG GCCGCGTTCGGTCAGC ACCGCGATGTCCACA TERM 2124 1984501 - 1984478 - G 88 -11 -4.26189 | gap 1, overlap 1984479 GCAGAAATTCGAAAA CGCC-TGGGCG CTT CGCCCACGGCA CCTGACGGTATTGCG TERM 2125 1984874 - 1984903 + G 78 -7.8 -4.37886 | TGCTGCGCAACGCCC GCACGCTGATCG GCACGA CGACCATCGTGC TTTTCTGGGCGGTCG TERM 2126 1984924 - 1984940 + G 71 -9.4 -3.7948 | overlap 1984907 1984916 TGGGCGGTCGGCGCA GGCTGG CTCGC CCAGCC TTTGCTCGATCTTGC TERM 2127 1985450 - 1985434 - g 71 -10.8 -3.60098 | opp_overlap 1985426 1985441, overlap 1985397 ACCCGGCACGCCAAA CGCGGC GTGCT GCCGCG TCGGGAGAATTTCTT Bphy_1739 1984855 - 1985541 + | hypothetical protein Bphy_1740 1985836 - 1985567 - | hypothetical protein Bphy_1741 1985895 - 1986131 + | putative signal peptide protein TERM 2128 1986171 - 1986211 + F 91 -17 -3.53091 | opp_overlap 1986178, overlap 1986178 CGGGTGCGGACAGGG CAAACAAGCCGAAGCCGT TCAAT ACGGCCTCGGCTTTTTTG TTTGCGCCAGCGGAT TERM 2129 1986178 - 1986204 + F 100 -13.7 -5.63517 | opp_overlap 1986178, overlap 1986171 GGACAGGGCAAACAA GCCGAAGCCGT TCAAT ACGGCCTCGGC TTTTTTGTTTGCGCC TERM 2130 1986204 - 1986178 - f 100 -15.9 -3.95378 | opp_overlap 1986171 1986178 GGACAGGGCAAACAA GCCGAAGCCGT TCAAT ACGGCCTCGGC TTTTTTGTTTGCGCC Bphy_1742 1986352 - 1986609 + | hypothetical protein TERM 2131 1986633 - 1986657 + T 71 -11.4 -3.30474 | ACGCGCGTTATCCGG GGCCCGGC CGCCATATT GCCGGGCC TTGCTGCTTCTGGAG Bphy_1743 1987027 - 1986704 - | antibiotic biosynthesis monooxygenase Bphy_1744 1987323 - 1988597 + | diguanylate phosphodiesterase Bphy_1745 1989025 - 1988618 - | class I peptide chain release factor TERM 2132 1989472 - 1989487 + G 91 -9 -4.81551 | GTCGCTGGTGTCGGG CGCGAT CGGC ATCGCG TTTTTGCTGTCGCTG TERM 2133 1989501 - 1989523 + G 74 -5.4 -4.52589 | overlap 1989503 CGTTTTTGCTGTCGC TGCTGCGGGG GCG CCCTGCCGTG TTTTATCTGACGCGC Bphy_1746 1989197 - 1989856 + | putative transmembrane protein Bphy_1747 1991871 - 1989853 - | exodeoxyribonuclease V, alpha subunit TERM 2134 1989978 - 1989944 - G 87 -17.8 -2.82516 | GCGCGCATCAGCACA GCGCGCGAGCCGACCA CTT CGACCCGCTCGCGCGC CCGCGTCACGGCCGT TERM 2135 1990204 - 1990167 - G 73 -12 -3.38812 | gap 2, overlap 1990165 CGCCGCGGAAGAAGA CGCGCAACGCGCCGTCCG CGCC CGG-CAGCGCGATGC-CG ATATCGCCATTGAAC TERM 2136 1990318 - 1990333 + g 71 -11.8 -3.29471 | GGCACGGCGCACCTG CGCGGC CATC GCCGCG TTCATGTGATCGACG TERM 2137 1990692 - 1990710 + g 77 -11.6 -3.75153 | opp_overlap 1990680 1990685, overlap 1990693 CAACGCAATCCGCAA GCGGCGCG AGC CGCGCCGG TTTCGCTTCAGACGG TERM 2138 1990693 - 1990709 + g 77 -15.1 -2.84878 | opp_overlap 1990680 1990685, overlap 1990692 AACGCAATCCGCAAG CGGCGCG AGC CGCGCCG GTTTCGCTTCAGACG Bphy_1748 1995593 - 1991868 - | exodeoxyribonuclease V, beta subunit TERM 2139 1993636 - 1993597 - G 75 -4.2 -4.59773 | gap 1, overlap 1993562 1993598 CTGTAGCGCGAAAAA CGCTCGACCCAACCCATCG CAT CGACGGTCTGCGT-GAGCT CGCCTGCGGCAGGTG TERM 2140 1994970 - 1995009 + g 76 -9.8 -4.07568 | opp_overlap 1994994, overlap 1994971 CGGCTTCTTCAGGCG CCGCGCAAGCTGTGCGTC AAGC GACGCCGGGCCTGCGCGC TTTTCGACCAGCCAC TERM 2141 1994971 - 1995008 + g 72 -13.3 -3.04398 | opp_overlap 1994994, overlap 1994970 GGCTTCTTCAGGCGC CGCGCAAGCTGTGCGTC AAGC GACGCCGGGCCTGCGCG CTTTTCGACCAGCCA Bphy_1749 1998955 - 1995590 - | exodeoxyribonuclease V, gamma subunit TERM 2142 1997458 - 1997509 + g 88 -17.8 -3.16668 | gap 1 CGGGAACCGCGCTGT CGGCGGCCGGCA-CGGGCGCGAGGC CGC GCCGCGCGCCCGCTGCCGCAAGCCA TTCCTGGACGTCTTC TERM 2143 1997965 - 1998009 + g 74 -10.5 -3.68886 | opp_overlap 1997987, overlap 1997961 CGGCGAGCCAGGTCG GCGCGGCATTCTCCGCGAAGT ACG ACGCCTCGGACGACGCCGCGC TTTCCGTCAGTTCGT Bphy_1750 1999163 - 2001583 + | protein of unknown function DUF893 YccS/YhfK Bphy_1751 2001841 - 2001596 - | hypothetical protein Bphy_1752 2002400 - 2001918 - | AsnC family transcriptional regulator TERM 2144 2002961 - 2003003 + G 90 -19.1 -2.70932 | gap 1, opp_overlap 2002942 2002983, overlap 2002963 GGCGGACAGCGATTG CGCGGCGCCC-GTGCGCGAG CAAT CGCGCGAACCGGGCGCCGTG TCGTTCACGCGCGCA TERM 2145 2002963 - 2003001 + G 89 -18.1 -2.90075 | gap 1, opp_overlap 2002942 2002983, overlap 2002961 CGGACAGCGATTGCG CGGCGCCC-GTGCGCGAG CAAT CGCGCGAACCGGGCGCCG TGTCGTTCACGCGCG Bphy_1753 2002533 - 2003165 + | cysteine dioxygenase type I TERM 2146 2003231 - 2003193 - T 72 -9.6 -3.72576 | gap 1, opp_overlap 2003198, overlap 2003197 2003198 CCCGCCCGCATCAAA TGAA-GGGGCGTCTCGC CTGGCC GCGTGACGCCCTTTTCA TTGTCGAAAACTCAT TERM 2147 2003226 - 2003197 - T 71 -10.6 -3.56704 | opp_overlap 2003198, overlap 2003193 2003198 CCCGCATCAAATGAA GGGGCGTCTCGC CTGGCC GCGTGACGCCCT TTTCATTGTCGAAAA TERM 2148 2003225 - 2003198 - T 80 -14.1 -2.73701 | opp_overlap 2003198, overlap 2003197 2003193 CCGCATCAAATGAAG GGGCGTCTCGC CTGGCC GCGTGACGCCC TTTTCATTGTCGAAA TERM 2149 2003198 - 2003225 + T 100 -14.1 -4.48987 | opp_overlap 2003197 2003193 2003198 CCGCATCAAATGAAG GGGCGTCTCGC CTGGCC GCGTGACGCCC TTTTCATTGTCGAAA Bphy_1754 2005891 - 2003252 - | MscS mechanosensitive ion channel TERM 2150 2005107 - 2005055 - G 72 -12.7 -3.14881 | gap 1, overlap 2005043 CAACGCGGCGACGAA CGCGACGATCCACGGACCCACGCG GCGCAG CGCGAAGATCAGCAGATCG-CGCG TGGTGGGATTCGCAT TERM 2151 2005874 - 2005818 - G 100 -15.8 -4.53703 | gap 1, overlap 2005819 AAAACAATACGAAAA CCGGCGTCAATCGCCAGCAGC-CCGCC GGAT GACGGCGCAGCCCGCGATTCACGCCGC GCAGGGCATGACTTC TERM 2152 2005873 - 2005819 - G 100 -19.3 -3.29781 | gap 1, overlap 2005818 AAACAATACGAAAAC CGGCGTCAATCGCCAGCAGC-CCGCC GGAT GACGGCGCAGCCCGCGATTCACGCCG CGCAGGGCATGACTT TERM 2153 2006034 - 2006066 + r 95 -17.7 -3.55622 | overlap 2006006 CGAGCCGCTCCGGTG CGCCGTGCGGCGC TTGCCTT GCGCCTCACGGCG TTTGAAGCCGTTCAG Bphy_1755 2006725 - 2006078 - | NAD-dependent epimerase/dehydratase TERM 2154 2006802 - 2006783 - R 100 -9.2 -5.40474 | opp_overlap 2006785 2006795, overlap 2006785 ATTTGGTTAAAAAAA GACGGGGC GCCC GCCCCGTG CTTGCGCATGCTGCT TERM 2155 2006800 - 2006785 - R 93 -11.8 -4.34482 | opp_overlap 2006785 2006795, overlap 2006783 TTGGTTAAAAAAAGA CGGGGC GCCC GCCCCG TGCTTGCGCATGCTG TERM 2156 2006785 - 2006800 + r 70 -11.8 -2.72661 | opp_overlap 2006783 2006785, overlap 2006795 TTGGTTAAAAAAAGA CGGGGC GCCC GCCCCG TGCTTGCGCATGCTG Bphy_1756 2007316 - 2006822 - | BadM/Rrf2 family transcriptional regulator Bphy_1757 2007851 - 2007381 - | hypothetical protein Bphy_1758 2008028 - 2008609 + | PfpI family intracellular peptidase TERM 2157 2009011 - 2009035 + G 79 -6.4 -4.4767 | gap 1, overlap 2009004 2009006 GTCGATCCGCGGCCG CAGGCTGC-TG AAGC CACGCCGCCTG TTTTCTGCTCCCTGA Bphy_1759 2008727 - 2009050 + | hypothetical protein Bphy_1760 2010782 - 2009091 - | histidine kinase TERM 2158 2009456 - 2009417 - G 77 -4.7 -4.60797 | opp_overlap 2009438 2009439 2009444, overlap 2009418 CCTTCACATAGAAAA TGCGCAGCGTCTGCACC CCGGGC GGCGCGGGCGCCGTGCC GATTTCGACGATGCC TERM 2159 2009439 - 2009457 + g 71 -13.8 -2.73124 | opp_overlap 2009418 2009417, overlap 2009438 2009444 CGTCTGCACCCCGGG CGGCGCGG GCG CCGTGCCG ATTTCGACGATGCCC TERM 2160 2009936 - 2009956 + g 70 -7.6 -4.04394 | gap 1, overlap 2009936 2009952 TGAAGGTCTCGTTTT C-CTGCGTC TGCT GACGCAGCG TTTCGTTGGTTTGCG TERM 2161 2010105 - 2010138 + g 70 -11 -3.35679 | gap 1, overlap 2010101 ACCGCGTGTAAGCGG CGCGAG-CGGCTCGT TGCTC GCGAGCCGGCTGGCG TTGTCCGTCAGCAAC TERM 2162 2012039 - 2012075 + G 78 -14.3 -3.29626 | CCTGATGCATCCGCT CGGCGCGCTGGTGACGG GCG CCGTCGCGGGCGGGCTG TTCGTGTACATGTTC Bphy_1761 2011206 - 2012408 + | Rh family protein/ammonium transporter TERM 2163 2012507 - 2012521 + F 79 -12.8 -3.45118 | GATCGGCCCCCGCCA CCGGCG AGC CGCCGG TTCCTTATACGATCG TERM 2164 2012849 - 2012890 + G 74 -15.1 -2.57274 | overlap 2012839 2012848 2012846 ATCGGCGCGGCGGTC GCGTACTTCGGGCGCAATC CGCA GATCGCGCCCGAATGGCGC CTCTTCATTATCACG Bphy_1762 2012693 - 2013073 + | CrcB protein TERM 2165 2013177 - 2013197 + F 71 -11.8 -2.96692 | TCATGGCTCAGCGTT GCCGCGCG CGTAT CGCGTGGC TGTATCATCGTCGTC Bphy_1763 2013227 - 2013580 + | hypothetical protein Bphy_1764 2013688 - 2013861 + | hypothetical protein Bphy_1765 2014589 - 2013924 - | hypothetical protein Bphy_1766 2015580 - 2014705 - | CHAD domain-containing protein TERM 2166 2015020 - 2015040 + g 84 -9 -4.56597 | gap 1 TGCGCGCGACGCCTT GCGCATGCG CTTG CGCA-GCGC TTTTTCAGCGACGCG Bphy_1767 2016028 - 2015693 - | hypothetical protein Bphy_1768 2016399 - 2016845 + | PRC-barrel domain-containing protein TERM 2167 2016865 - 2016884 + F 82 -8.5 -4.45544 | opp_overlap 2016864, overlap 2016864 GAGTGCGGTACACAC GCCGGCG TAGCGC TGCCGGC TTTTCCTTCCTAGAC TERM 2168 2016903 - 2016943 + F 88 -14.1 -3.55444 | gap 2, overlap 2016904 2016906 2016935 TCCTTCCTAGACGCT C-ATGC-CGGCGGCCGTCA CTTTC TGACGGCCGCCGCGCTTCG TTTGGCCGGTGCGCG TERM 2169 2016906 - 2016939 + F 100 -20.4 -3.51708 | gap 1, overlap 2016904 2016903 2016935 TTCCTAGACGCTCAT GC-CGGCGGCCGTCA CTTTC TGACGGCCGCCGCGC TTCGTTTGGCCGGTG TERM 2170 2017098 - 2017077 - f 100 -17.3 -5.75945 | ATCGCCGAAAAAAAA GGCGCCACG TTAC CGTGGCGCC TTCAAAAAGTTCTAG TERM 2171 2017223 - 2017243 + F 100 -14.7 -4.26076 | overlap 2017224 2017227 TGGGCGCGGCGGATT TGACGCGCG CCG CGCGCGTCG TTTTACTGACAATGG TERM 2172 2017224 - 2017242 + F 88 -16 -3.15324 | overlap 2017223 2017227 GGGCGCGGCGGATTT GACGCGCG CCG CGCGCGTC GTTTTACTGACAATG TERM 2173 2017391 - 2017381 - f 84 -2.4 -5.46657 | opp_overlap 2017381, overlap 2017384 GATCGTAAGAAAAAA GGAC TTA GGCC TTTCTGAGAGAAGGT TERM 2174 2017565 - 2017531 - g 75 -7.1 -4.4078 | overlap 2017534 2017554 TGCCGCGAAGGAAAA GGACG-GCTCGGGCGAC GAA GTCACC-GCGCTCGCCC GCGGCCTGACGGTAC Bphy_1769 2017481 - 2018317 + | IclR family transcriptional regulator Bphy_1770 2018621 - 2018400 - | hypothetical protein TERM 2175 2018833 - 2018812 - g 100 -2.9 -5.84381 | overlap 2018815 GGACGAACAAAAAAA GCAGCCTGA ATCA TCACGCCAC ACCGAACCCGCCAGC Bphy_1771 2018795 - 2020204 + | RND family efflux transporter MFP subunit TERM 2176 2021146 - 2021126 - g 77 -8.3 -4.28111 | GACAGCATCAAGAAA CTGCTGC CCACGCT GCAGCAG TCGCTGCCCGCCGCG Bphy_1772 2020220 - 2023357 + | acriflavin resistance protein Bphy_1773 2023374 - 2026685 + | acriflavin resistance protein Bphy_1774 2027189 - 2026725 - | putative signal peptide transmembrane protein TERM 2177 2027286 - 2027266 - R 71 -7.5 -4.19817 | GGCACGTAGCTAAAA GCGCGGC GCATGAA GCCGCAC CGCTCACCCGCCACC Bphy_1775 2027876 - 2027313 - | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Bphy_1776 2029384 - 2028038 - | diguanylate phosphodiesterase TERM 2178 2030255 - 2030243 - g 71 -9.1 -3.72576 | CCCTCGTCGAGGAAA TGCGC CAC GCGCA ACAGAAGGCGGATGC Bphy_1777 2029702 - 2031531 + | diguanylate cyclase/phosphodiesterase Bphy_1778 2031599 - 2033056 + | putative signal transduction protein Bphy_1779 2034489 - 2033137 - | diguanylate phosphodiesterase TERM 2179 2033471 - 2033431 - G 76 -6.2 -4.45945 | gap 2, overlap 2033421 2033433 2033447 ATCGACGAACGAAAA CACGCCCGTGAGAAAAGCCG CGT CGG-TTTCGTCACGGCCG-G CTTCGGGCAGACGTT TERM 2180 2033470 - 2033433 - G 73 -9.9 -3.83437 | gap 1, overlap 2033421 2033431 2033447 CGACGAACGAAAACA CGCCCGTGAGAAAAGCCG CGT CGG-TTTCGTCACGGCCG GCTTCGGGCAGACGT TERM 2181 2033468 - 2033447 - G 83 -9.3 -4.37092 | overlap 2033433 2033431 ACGCCCGTGAGAAAA GCCGCGTCG GTTT CGTCACGGC CGGCTTCGGGCAGAC TERM 2182 2034708 - 2034740 + r 100 -22.1 -2.64735 | opp_overlap 2034708, overlap 2034714 AACAAGGCCAAAAAA GCACAACCGGCCGTT CGA GGCGGCCGGTTGTGC TGCTGTCGCTGCGAT TERM 2183 2034740 - 2034708 - R 100 -20.7 -5.11937 | opp_overlap 2034708 2034714 AACAAGGCCAAAAAA GCACAACCGGCCG TTCGAGG CGGCCGGTTGTGC TGCTGTCGCTGCGAT TERM 2184 2034714 - 2034734 + r 79 -12.5 -3.45849 | opp_overlap 2034708, overlap 2034708 GCCAAAAAAGCACAA CCGGCCGTT CGA GGCGGCCGG TTGTGCTGCTGTCGC Bphy_1780 2035577 - 2034780 - | cationic amino acid ABC transporter, periplasmic binding protein TERM 2185 2035180 - 2035202 + g 72 -9 -4.1711 | CCCTTGAGCGAAGCG GGCGTCGGCT GCA GGCCGCTGCC TTTCTTCGCGATCAT Bphy_1781 2035948 - 2035661 - | hypothetical protein TERM 2186 2035887 - 2035907 + g 91 -6.7 -5.06414 | overlap 2035896 CAGTCGATCTTCTTG CCTGCGGCG CGG CGTTGCCGG TTTTTCTTCGCGGGC TERM 2187 2036595 - 2036575 - R 95 -6.7 -5.4505 | overlap 2036576 CCCGCGAAGAAAAAA CCGGCAACG CCG CGCCGCAGG CAACAACAGCGACTG Bphy_1782 2037670 - 2036627 - | succinylglutamate desuccinylase Bphy_1783 2038994 - 2037654 - | succinylarginine dihydrolase Bphy_1784 2040467 - 2039004 - | succinylglutamic semialdehyde dehydrogenase Bphy_1785 2041503 - 2040478 - | arginine N-succinyltransferase Bphy_1786 2042552 - 2041500 - | arginine/ornithine succinyltransferase, alpha subunit TERM 2188 2042160 - 2042135 - G 81 -16.9 -2.63596 | overlap 2042117 2042137 GCGCACGCGACATCA GATGCGCGGCG GCAT CGCCACGCATC TCCGGGTCGATGTAG TERM 2189 2042158 - 2042137 - G 73 -13.7 -2.85999 | overlap 2042117 2042135 GCACGCGACATCAGA TGCGCGGCG GCAT CGCCACGCA TCTCCGGGTCGATGT TERM 2190 2042457 - 2042430 - G 74 -13.4 -3.29144 | gap 1, opp_overlap 2042431, overlap 2042415 2042431 CGAGTCTTCCGACAA CGCGACGCGCGCC TCC AGCGCGCGCCG-G TCGTGTGGCAGCGAG TERM 2191 2042457 - 2042431 - G 70 -13.6 -2.57344 | opp_overlap 2042431, overlap 2042430 2042415 GAGTCTTCCGACAAC GCGACGCGCGCC TCC AGCGCGCGCCGG TCGTGTGGCAGCGAG Bphy_1787 2043810 - 2042581 - | succinylornithine transaminase family protein TERM 2192 2043450 - 2043481 + g 82 -15.8 -3.17075 | overlap 2043454 CATGACGGTCGAAGG CGACGCGGCGCGCA AGCT TGAGCGCCGCTTCG TTGGCTTCGGCGCCC TERM 2193 2043454 - 2043477 + g 80 -13.8 -3.4052 | overlap 2043450 ACGGTCGAAGGCGAC GCGGCGCGCA AGCT TGAGCGCCGC TTCGTTGGCTTCGGC Bphy_1788 2044987 - 2043935 - | AraC family transcriptional regulator Bphy_1789 2045812 - 2045021 - | ABC transporter related Bphy_1790 2046619 - 2045906 - | polar amino acid ABC transporter, inner membrane subunit Bphy_1791 2047337 - 2046648 - | polar amino acid ABC transporter, inner membrane subunit Bphy_1792 2047762 - 2048370 + | methyltransferase type 11 Bphy_1793 2049432 - 2048401 - | patatin Bphy_1794 2050131 - 2049550 - | putative lipoprotein TERM 2194 2050874 - 2050893 + H 80 -9.2 -4.14013 | overlap 2050860 2050889 2050890 CGGCGCGACGCATAT CGGGCCTG ATAT CGGGCCTG TTTTCAGGGGTTTTG TERM 2195 2051304 - 2051288 - g 75 -7.9 -4.25104 | CGGGCGGCACGAAAA CGATCCG CGT CGGCTCG GGTGGCGTGATGCTG Bphy_1795 2051059 - 2052069 + | luciferase family protein Bphy_1796 2053285 - 2052122 - | alpha/beta hydrolase fold protein Bphy_1797 2053710 - 2054978 + | glucose-1-phosphate adenylyltransferase TERM 2196 2055030 - 2055065 + F 74 -11 -3.53012 | gap 1 TGCCCGGCACGGCAG GCGCCGTGCGCGCGGCG GCA CGTTGCGCGCCCA-CGC TTTGGCAAGGCCCAC Bphy_1798 2055160 - 2056620 + | glycogen/starch synthase, ADP-glucose type Bphy_1799 2056898 - 2057761 + | pyridoxal kinase TERM 2197 2058099 - 2058121 + F 95 -13.4 -4.26903 | overlap 2058100 ACGTCCTATAATGCC TGCCGCGCGA ACT TTGCGCGGCG TTTTAATGGCATGGG TERM 2198 2058100 - 2058120 + F 83 -14.7 -3.1582 | overlap 2058099 CGTCCTATAATGCCT GCCGCGCGA ACT TTGCGCGGC GTTTTAATGGCATGG Bphy_1800 2058160 - 2058621 + | hypothetical protein TERM 2199 2058727 - 2058707 - T 95 -6.7 -5.4505 | overlap 2058708 TCCGCGAAGAAAAAA CCGGCAACG CCG CGCCGCAGG CAAGAACATCGACTG Bphy_1801 2060669 - 2058771 - | putative transmembrane protein TERM 2200 2060287 - 2060267 - G 75 -3.1 -4.7373 | overlap 2060268 2060270 2060271 CGATTCCAGGAAAAA TCACCGTGC GCA GCACGCCGT CCTGGAAGGTCGGCG TERM 2201 2060635 - 2060665 + g 71 -13.9 -2.69151 | opp_overlap 2060621 2060618, overlap 2060633 AGCAGCGGCAGCATG GCGGCCGCGCGCA GCCTG TGCACGCGGCGGC TCATGTCTCACGCGC Bphy_1802 2061511 - 2060666 - | AraC family transcriptional regulator TERM 2202 2061635 - 2061660 + H 84 -12.5 -3.66874 | gap 1, opp_overlap 2061628 2061627 ATCACAACGGCGGCA GGCGCGGCG-CG AAG CGTCGCCGCCCC TTTCAATCGACTTCG Bphy_1803 2061695 - 2062243 + | hypothetical protein Bphy_1804 2063660 - 2062272 - | major facilitator transporter TERM 2203 2062354 - 2062326 - G 70 -7.3 -3.99374 | overlap 2062328 CTTCACGAAGAAGAA CAGCGAGCACAGC ACG GCCGCGCCCACCA CGAAGAACGCCGGTG Bphy_1805 2065027 - 2063804 - | GntR family transcriptional regulator Bphy_1806 2065150 - 2066004 + | LysR family transcriptional regulator Bphy_1807 2066703 - 2066029 - | hypothetical protein TERM 2204 2066337 - 2066389 + g 74 -11.2 -3.61398 | gap 2, opp_overlap 2066364 CGACCTCGTCTTCAG GACGGCGCTGCGGTTGCT-G-GCCGA AGA TCGGCTCCGGCGGACGCAGCACCGAC TTCTTGCGAACGGGA TERM 2205 2066425 - 2066435 + g 72 -8.2 -4.00868 | opp_overlap 2066423 2066424 GGTGCCGCGAAAACG CGCC AAG GGCG TTTCGTTGTCGATGG Bphy_1808 2067882 - 2067070 - | N-formylglutamate amidohydrolase TERM 2206 2067113 - 2067128 + g 84 -9 -4.56597 | overlap 2067077 GTCTTCACGAGCTTG TCGAGC AGCG GCTCGA TTTTTGCGGCGAGCG Bphy_1809 2069367 - 2067937 - | formiminoglutamate deiminase Bphy_1810 2070584 - 2069364 - | imidazolonepropionase TERM 2207 2069969 - 2069943 - G 76 -9.4 -4.18018 | opp_overlap 2069958 2069961, overlap 2069961 2069963 CTGTTCGAGCGAAAA GCCGATGCGTTC GCA GAACACGTCGAC GGCATCGACGAGTCC TERM 2208 2070295 - 2070245 - G 75 -13.8 -3.02511 | opp_overlap 2070243 CCGATTGCGCGAAGA GCGACGCCTCGTCGGCGGCACGCG TCG CGCGTACCGTCGATACGATGCCGC CGCCCTGCTTCGCAA Bphy_1811 2071258 - 2070641 - | hypothetical protein Bphy_1812 2072949 - 2071261 - | urocanate hydratase Bphy_1813 2073718 - 2073014 - | histidine utilization repressor Bphy_1814 2075272 - 2073749 - | histidine ammonia-lyase Bphy_1815 2075613 - 2075269 - | hypothetical protein TERM 2209 2075550 - 2075517 - G 90 -11 -4.42788 | opp_overlap 2075518 2075519, overlap 2075518 GGCAAGCGGACAAAA TGCG-GCGCAGGGCCG CATG CGGC-CTGCGCGCGCC GCCCGGCGATCCGAT TERM 2210 2075549 - 2075518 - G 83 -14.5 -3.25191 | opp_overlap 2075518 2075519, overlap 2075517 GCAAGCGGACAAAAT GCG-GCGCAGGGCCG CATG CGGC-CTGCGCGCGC CGCCCGGCGATCCGA TERM 2211 2076227 - 2076213 - g 87 -5.6 -5.03314 | GGCAGGCGCAAAAAA GCGGCA TCG TGCGGC ACGTGGGCAGCGGCG TERM 2212 2076321 - 2076309 - g 75 -6.9 -4.36914 | opp_overlap 2076309 TCGCGCTCGAGAAAA GCCCC GCA GGGAC GTTCTATTTCGTCGA Bphy_1816 2075672 - 2076577 + | NAD-dependent epimerase/dehydratase TERM 2213 2076595 - 2076580 - f 70 -11.8 -2.72461 | overlap 2076569 2076579 GAAGGGCGCGTAAAT CGCGCG ACAC CGCGCG CAAAACGTTGGCCAG Bphy_1817 2076724 - 2076906 + | hypothetical protein Bphy_1818 2077716 - 2076940 - | protein of unknown function DUF899 thioredoxin family protein Bphy_1819 2078196 - 2077768 - | activator of Hsp90 ATPase 1 family protein TERM 2214 2078483 - 2078456 - R 88 -11.2 -4.10925 | overlap 2078428 2078457 ACAGACGCTGCAAAA GCGCGCGCCG CGTCGGGT CGGCGAGCGC GGCGAACGTGCGGTC Bphy_1821 2080036 - 2078639 - | xanthine/uracil/vitamin C permease TERM 2215 2079961 - 2079947 - G 79 -5.6 -4.59773 | opp_overlap 2079946 GGTGACGCCGAAAAA GCGGTC AAT GAACGC CGTTTGCCCGTCGCG TERM 2216 2080217 - 2080205 - H 91 -7.7 -5.08601 | opp_overlap 2080213 CCATCGCAATAAAAA CATGC CGC GCATG TCGCAATGCTTATAT TERM 2217 2081479 - 2081513 + G 86 -15.7 -3.21747 | opp_overlap 2081509, overlap 2081481 2081482 CCCGCACCGCCTCCC GCACCTGTTGCCGCG TCTGC CGCGGCAACAGGCTC TTCGTCGTCCACTGC TERM 2218 2081481 - 2081511 + G 85 -16.9 -3.17229 | opp_overlap 2081509, overlap 2081479 2081482 CGCACCGCCTCCCGC ACCTGTTGCCGCG TCTGC CGCGGCAACAGGC TCTTCGTCGTCCACT TERM 2219 2081482 - 2081510 + G 91 -20.4 -2.50016 | opp_overlap 2081509, overlap 2081481 2081479 GCACCGCCTCCCGCA CCTGTTGCCGCG TCTGC CGCGGCAACAGG CTCTTCGTCGTCCAC Bphy_1822 2080528 - 2081559 + | hypothetical protein TERM 2220 2081687 - 2081706 + G 78 -10.7 -4.03234 | opp_overlap 2081679 GCACAAGTGGACGCA GGGCGAG ATCGGC CTCGCCC TTTCTATCGGCACGA Bphy_1823 2081556 - 2082815 + | major facilitator transporter TERM 2221 2082857 - 2082869 + T 90 -4.7 -5.4505 | overlap 2082856 2082858 CGGGTTGCCTGCGGG GCGGC GTT GCCGG TTTTTTCTTCGCGGG TERM 2222 2083556 - 2083544 - T 91 -4.7 -5.5112 | overlap 2083545 GCGACGAAGAAAAAA CCGGC AAC GCCGT GCGGCAGGCAAGAAC Bphy_1824 2084948 - 2083602 - | major facilitator transporter TERM 2223 2084142 - 2084115 - G 70 -2.6 -4.60797 | CGTCGACAGATAAAA CAGCACGATG TAATTCGC CGCCGTGCCG CCGATCGTCGTCACC Bphy_1825 2086130 - 2084967 - | amidohydrolase Bphy_1826 2086266 - 2087216 + | LysR family transcriptional regulator Bphy_1827 2088301 - 2087348 - | LysR family transcriptional regulator TERM 2224 2089145 - 2089161 + G 84 -13.7 -3.6682 | GGATCGCGTGTTGCC CGCGCTG TCG CAGCGCG TTTCCATGCGTGCGC Bphy_1828 2088429 - 2089781 + | NADH dehydrogenase TERM 2225 2089855 - 2089803 - T 77 -11.7 -3.54424 | opp_overlap 2089817 2089818 TGGCACGCCGTCAAA CGCGTGGCGCCAGCCGTCAGTCGAG AAA CTCGGCGGACCTTTGGCGCAGCGCG GCGCTGAACTCGTCC Bphy_1829 2090712 - 2089819 - | LysR family transcriptional regulator Bphy_1830 2090810 - 2091424 + | lysine exporter protein LysE/YggA Bphy_1831 2092402 - 2091437 - | hypothetical protein TERM 2226 2091977 - 2091953 - G 93 -6.3 -5.28176 | overlap 2091955 CGTATCGAGAAAAAA GCCGCGATAGC CGC GCTCCCACAGC GGCTTGACGATCTCG TERM 2227 2092385 - 2092372 - G 71 -9.5 -3.77196 | opp_overlap 2092383 CGACGATCCACGAAA CGCCC AGGC GGGCG AGAGAACTGGCTGTC Bphy_1832 2093793 - 2092420 - | putative transmembrane protein Bphy_1833 2095409 - 2093793 - | glycosyl transferase group 1 TERM 2228 2094539 - 2094572 + g 76 -13.8 -3.14132 | overlap 2094544 GCGTGCGCGCGGCTT GCGCGCCGTCGGCG ATCTGC CGCTGACGGTTCGC TTCATACAGCGCGAC TERM 2229 2094826 - 2094814 - G 70 -4.7 -4.37092 | AGCGCGCCGAGAAAA CCGGC ATA GCCCG TCGACACCGTGTGAT Bphy_1834 2096455 - 2095406 - | putative transmembrane protein Bphy_1835 2097863 - 2096448 - | putative transmembrane protein TERM 2230 2097534 - 2097510 - G 74 -11.4 -3.61398 | gap 1 GCCCCCCGTGAAGAA CAGCGTCGGCC ACGC GGCCG-CGCCG CCCTGATGCAGCAGC TERM 2231 2097769 - 2097750 - G 70 -6.3 -4.21194 | CTCGACGATGGAAAA CGGCCGC GACACT GCGGGCG CGACGAGGCGCCGCC Bphy_1836 2098509 - 2097958 - | hypothetical protein TERM 2232 2098658 - 2098635 - R 75 -5.8 -4.58395 | overlap 2098637 CTGATGCTGCAAAAA CACGGCTGCG TGAT CGCCGCCGAA CACGGTGCCCGCAAT TERM 2233 2098656 - 2098637 - R 77 -10.6 -3.90762 | overlap 2098635 GATGCTGCAAAAACA CGGCTGCG TGAT CGCCGCCG AACACGGTGCCCGCA TERM 2234 2100030 - 2100074 + r 90 -15.7 -3.53012 | gap 1, overlap 2100032 2100058 GAGCGTTTCGGCATC CTGCGCGGTGCG-GCCGCGC ATCGCC GCGCGCTGCGCGCCGTGCAG TTTCACGAGCCGCGC Bphy_1839 2105361 - 2102515 - | hypothetical protein TERM 2235 2103251 - 2103285 + g 77 -11.4 -3.72695 | overlap 2103252 TAGACGTTCTCGTCC TGGTTGGGCGCGTA CACCTGA TACGCGCCCGGCCC TTTCATCACGCCAAT TERM 2236 2103252 - 2103284 + g 77 -14.9 -2.83403 | overlap 2103251 AGACGTTCTCGTCCT GGTTGGGCGCGTA CACCTGA TACGCGCCCGGCC CTTTCATCACGCCAA Bphy_1840 2105875 - 2106690 + | AraC family transcriptional regulator Bphy_1841 2106778 - 2107428 + | lysine exporter protein LysE/YggA Bphy_1842 2107706 - 2107867 + | hypothetical protein TERM 2237 2107912 - 2107962 + T 73 -12.5 -2.71924 | gap 1, overlap 2107901 2107911 GGGACGCGCGCTGGG CCGCGCGTTCGCTTGCAATCGCTC TGGC GGCCGGTT-CAGGCGCCCGCGCGG ATTTCGAGCACGCTC Bphy_1843 2108210 - 2107947 - | hypothetical protein Bphy_1844 2109049 - 2108321 - | TetR family transcriptional regulator Bphy_1845 2110113 - 2109202 - | LysR family transcriptional regulator TERM 2238 2109286 - 2109272 - G 76 -5.6 -4.52589 | TCCTCGCACAGAAAA CGCTGC AAC GCATCG ACGGCTGTTTCCTGC TERM 2239 2110029 - 2110052 + g 72 -10.9 -3.53444 | TGCGGGCGAGGCGTA CGGCCGCCG CACTGA CGGCGCCCG TTTCGGCGACCGTCA Bphy_1846 2110210 - 2111106 + | hypothetical protein Bphy_1847 2111195 - 2111620 + | hypothetical protein Bphy_1848 2114362 - 2111627 - | 2-oxo-acid dehydrogenase E1 subunit, homodimeric type TERM 2240 2111793 - 2111774 - G 77 -12.1 -3.63694 | ATCCACTTCGAAGAA CGCGCGC AGCGCA GCGCGCG TGTCGCTGCGCCCGA TERM 2241 2114059 - 2114087 + g 75 -4.3 -4.70169 | overlap 2114053 2114052 GCACCACCATCGCGA GCGCGTTCCAGCG CAA CGCGGCGGCGAGC TTTTCTTCCGTGTCG TERM 2242 2114812 - 2114778 - g 72 -8.4 -4.09685 | overlap 2114781 2114790 GGTGAGCCTCGAAAA GCAGGTCGAAGAGGCG TTG CGCCGCTTCGAGCAGG AAGTCGGCGAGCGCC TERM 2243 2114809 - 2114781 - g 72 -13.1 -3.08508 | overlap 2114778 2114790 GAGCCTCGAAAAGCA GGTCGAAGAGGCG TTG CGCCGCTTCGAGC AGGAAGTCGGCGAGC Bphy_1849 2114425 - 2115066 + | AsnC family transcriptional regulator Bphy_1850 2116771 - 2115098 - | AMP-dependent synthetase and ligase Bphy_1851 2116955 - 2117227 + | hypothetical protein Bphy_1852 2117616 - 2117245 - | hypothetical protein TERM 2244 2117714 - 2117734 + H 76 -12.5 -3.1085 | TGTCGTGCCAGATGG CGCCGCGGA TGG TGCGCGGCG TGTTCCGTCAATTGA TERM 2245 2117885 - 2117866 - g 85 -16.4 -3.17194 | opp_overlap 2117866 2117868 ATCGTTGCAACGCAA GGCGCGGC GCTC GCCGCGCC GCATCTGTTGGGACA Bphy_1853 2117767 - 2118543 + | GDSL family lipase TERM 2246 2118563 - 2118545 - T 73 -12.4 -3.07816 | opp_overlap 2118542 GGCTGATGGAGTGAA TGCGGCGC ACG ACGCCGCA TGCTCATTCGCCCAC Bphy_1854 2118872 - 2118567 - | hypothetical protein TERM 2247 2119895 - 2119915 + H 79 -12.5 -3.254 | overlap 2119893 ACCCCGCGGTTCAGG CGCAGCCGG AAA CGGGCTGCG TGTTCTGGGTGCGTG Bphy_1855 2120192 - 2120809 + | ATP dependent DNA ligase Bphy_1856 2120849 - 2121064 + | YcfA family protein TERM 2248 2121070 - 2121083 + F 75 -9.5 -3.86015 | opp_overlap 2121066 2121070 TCTGAAGTGAAGGGA GCCCC GAAC GGGGC TTTCTCCGCACCGTC TERM 2249 2121333 - 2121314 - g 88 -9.2 -4.66833 | GTCGAAGGCCAAAAA GGGCGAGG AACT CGTCGCCC TGCCCGCCAGCGTAT Bphy_1857 2121120 - 2121536 + | hypothetical protein TERM 2250 2121705 - 2121720 + T 71 -10.4 -3.62597 | CTCCAGATGCGACGG TCGCCC GAGT GGGCGA TTATTACGGAATGAA TERM 2251 2121865 - 2121905 + T 86 -12 -4.07687 | opp_overlap 2121856 CAAAACCTGCAGTTA CAGTCCGTAGCCTGTG TTCACGACT TACAGGCTGTGGACTG TTTTCACGCGGGAAT Bphy_1858 2122289 - 2121909 - | hypothetical protein Bphy_1859 2122708 - 2122289 - | hypothetical protein Bphy_1860 2122962 - 2122750 - | hypothetical protein TERM 2252 2123007 - 2122992 - R 100 -11.8 -5.45652 | ATGGGCAATAAAAAA CCCCGC CGAA GCGGGG TTGGGGTCATCGTTT Bphy_1861 2123853 - 2123014 - | hypothetical protein TERM 2253 2123879 - 2123924 + r 71 -7.5 -4.18494 | gap 1, overlap 2123883 TTCACAGGCAATTGG TGGTTAGAGCCGCCCTGGTGTT GGT AGCACCTTGGCGGCTC-GCTCA TTTTACATCCACATC Bphy_1862 2124419 - 2123922 - | hypothetical protein Bphy_1863 2124988 - 2124416 - | glycoside hydrolase family protein Bphy_1864 2125238 - 2124990 - | hypothetical protein TERM 2254 2125218 - 2125196 - G 76 -9.1 -4.07568 | opp_overlap 2125194 2125196 2125198 CTGTGTTTGCCAAAA GTTCAGCGC GGTAT GCGCTGATC TCTTGCTGAAGCGTG TERM 2255 2125327 - 2125312 - H 100 -11.8 -4.98531 | opp_overlap 2125324, overlap 2125291 CCCGGAAATGAAAAA GCCGCC CGAA GGCGGC TGGTGGTCGGTTGTT Bphy_1865 2125474 - 2125758 + | hypothetical protein TERM 2256 2126108 - 2126098 - g 77 -4.6 -4.65916 | overlap 2126100 CGTACGCGAACAAAA CAGG GGT CCCG ACCGCATACTTCACG TERM 2257 2126426 - 2126399 - g 71 -9.8 -3.75629 | CAGCCGCAATCGAAA CGTGCCGCCGCT CTGG AACGACGTCACG ACAGTGGAACTCAAG Bphy_1866 2125761 - 2126453 + | hypothetical protein TERM 2258 2126925 - 2126909 - g 82 -5.8 -4.76087 | CACACAACAAAGAAA GCGCAC TGATC GTGCAC CGCGAGGACTGGCTG TERM 2259 2127049 - 2127082 + G 87 -5.9 -4.99638 | overlap 2127050 2127053 AATCCGTTCCTCTGG ACGATGCCGATCGAG CTAA CTGGATCGGCAATGG TTTTTCTCTACCTCT TERM 2260 2127127 - 2127117 - g 70 -4.6 -4.3767 | overlap 2127125 2127126 GCACAGCAGAATAAA GCGC CAA ACGC TGACCCTCGCGGTCA Bphy_1867 2126506 - 2127699 + | acyltransferase-like protein Bphy_1868 2128753 - 2127881 - | hypothetical protein TERM 2261 2128517 - 2128550 + g 70 -7.4 -3.96216 | opp_overlap 2128520 2128521, overlap 2128520 GCGACCTGGACCGCA CAACGCCTTGATCG CGGCGA CGATCTGGGCATTG TTGTTTCGATCAGGC Bphy_1869 2129356 - 2128763 - | hypothetical protein Bphy_1870 2130468 - 2129365 - | baseplate J family protein Bphy_1871 2131685 - 2130468 - | GP46 family protein TERM 2262 2130616 - 2130658 + g 71 -9.8 -3.7829 | overlap 2130636 CCGTCGTCGATCATC CATTGCAGCGCCTCAACGAT GTA GTCGTAGGCGCGTTGCAACG TTTCCTGCGTCTGCT Bphy_1872 2132281 - 2131682 - | phage baseplate assembly protein V Bphy_1873 2133369 - 2132278 - | Mu P family protein Bphy_1874 2134845 - 2133373 - | DNA circulation family protein Bphy_1875 2136644 - 2134842 - | putative membrane protein, phage K related Bphy_1876 2137050 - 2136763 - | hypothetical protein Bphy_1877 2137425 - 2137054 - | hypothetical protein TERM 2263 2137472 - 2137444 - R 93 -13.2 -4.36914 | gap 1, opp_overlap 2137437, overlap 2137445 2137446 GGGCTCTCCAGAAAA GC-GAAAGCCGCC CTAA GGCGGCTCTCAGC GGTGCGGTTTTACCT TERM 2264 2137470 - 2137445 - R 82 -13.3 -3.21934 | opp_overlap 2137437, overlap 2137444 2137446 GGCTCTCCAGAAAAG CGAAAGCCGCC CTAA GGCGGCTCTCA GCGGTGCGGTTTTAC TERM 2265 2137469 - 2137446 - R 78 -14.6 -2.52946 | opp_overlap 2137437, overlap 2137445 2137444 GCTCTCCAGAAAAGC GAAAGCCGCC CTAA GGCGGCTCTC AGCGGTGCGGTTTTA Bphy_1878 2138968 - 2137487 - | Mu tail sheath family protein Bphy_1879 2139147 - 2138971 - | hypothetical protein Bphy_1880 2139720 - 2139157 - | hypothetical protein Bphy_1881 2140049 - 2139717 - | hypothetical protein Bphy_1882 2141086 - 2140049 - | putative phage protein GP20 TERM 2266 2140626 - 2140651 + g 88 -10.5 -4.4078 | gap 1 TGGAACCAGTCGTAT TTCACGG-TGCC ATC GGCGTCCGTGAA TTTTCCTTGCACAGC TERM 2267 2140826 - 2140862 + g 72 -7.2 -4.21194 | gap 1, opp_overlap 2140851 2140852 GATCGTATCGGCGTG GCG-CAGACGCGGCACT TCGA AGTAACGCGCCTGACGC TTTTCCGTCGTGCGC TERM 2268 2141126 - 2141111 - R 100 -11.8 -4.98531 | opp_overlap 2141111 2141110 2141108 2141106, overlap 2141091 CCTTCAAATGAAAAA GCCGCC CGAA GGCGGC CTGTCTTTTTCGAGT TERM 2269 2141111 - 2141126 + r 70 -11.8 -2.72233 | opp_overlap 2141091 2141111, overlap 2141110 2141108 2141106 CCTTCAAATGAAAAA GCCGCC CGAA GGCGGC CTGTCTTTTTCGAGT Bphy_1883 2141797 - 2141150 - | putative phage protein GP19 Bphy_1884 2142491 - 2141832 - | hypothetical protein Bphy_1885 2143397 - 2142519 - | peptidase S49 TERM 2270 2143273 - 2143259 - G 95 -12.8 -4.25104 | TCGGCTTCACGAAAA CCGGCG CTT CGCCGG CGAACTCGACATCGG Bphy_1886 2144173 - 2143394 - | hypothetical protein TERM 2271 2144212 - 2144193 - R 88 -15 -3.53031 | overlap 2144189 CTCAGCTGAAACGAA GACGCGCC CGAA GGCGCGTC AAGGACTATTGCGGT Bphy_1887 2145888 - 2144218 - | lambda family phage portal protein TERM 2272 2144630 - 2144665 + g 73 -14.1 -2.80492 | opp_overlap 2144625, overlap 2144627 CGACGAGACAGCGTC TTCCAGCTTTCGAGC ATCGCA GCTCGAGCGCTGGAA TAGTTCGTCCTGCTC Bphy_1888 2146133 - 2145888 - | hypothetical protein Bphy_1889 2148168 - 2146141 - | terminase GpA TERM 2273 2147023 - 2147050 + g 72 -8.4 -3.98627 | gap 1 CGGGCGATACGGCAT GCCGGCCTGTGTG TTC CAC-CAGGTCTGC TTCTTCTCTTCGTCG TERM 2274 2147545 - 2147520 - G 70 -11.1 -3.37685 | gap 1, opp_overlap 2147541 2147542, overlap 2147511 2147518 2147521 AAAAGTCGGGAAACA TGCGATGCCCGC AAT GCGGGCA-CGCG ATCGACGCGCGGCGT TERM 2275 2147544 - 2147521 - G 74 -14.6 -2.61888 | gap 1, opp_overlap 2147541 2147542, overlap 2147511 2147520 2147518 AAAGTCGGGAAACAT GCGATGCCCGC AAT GCGGGCA-CGC GATCGACGCGCGGCG TERM 2276 2147878 - 2147899 + g 72 -10.9 -3.4582 | overlap 2147876 CAGCGCCGGCGTCAC GCGGATCAG CGGG CTGATTCGC TCTTTGCTGAACTGC Bphy_1890 2148814 - 2148221 - | hypothetical protein TERM 2277 2148605 - 2148628 + g 71 -10.4 -3.60006 | CCCTTTCGCCGCCAG GGTAACAGAC TGCC GTTTGTTACC TTTGGCCGTCTGCTT Bphy_1891 2149561 - 2148983 - | hypothetical protein TERM 2278 2149022 - 2149046 + g 84 -12.9 -3.71848 | opp_overlap 2149004 GAGTTCGTGCTTCAG GATCTGCGGGA ACT TCTCGCGGATC TTCTTCATCAGCGCC Bphy_1892 2149841 - 2149563 - | hypothetical protein TERM 2279 2149885 - 2149863 - R 100 -11.3 -5.64421 | gap 1 ACCGGAAATAAAAAA GCCAGCGACG AAGG CG-CGCTGGC GAATCCCACGACTCT TERM 2280 2150160 - 2150136 - R 100 -13.6 -5.69262 | gap 1, opp_overlap 2150133 GCACAAAAACAAAAA GCCCGCC-GTC TTTC GACTGGCGGGC TCGTGAATTTGTGCC Bphy_1893 2150895 - 2150350 - | hypothetical protein TERM 2281 2150880 - 2150904 + g 77 -12.2 -3.59087 | gap 1, opp_overlap 2150849, overlap 2150898 2150902 TGGGCTGACCGAGCG CCGCAGCGCGA TCCA TCG-GCTGCGG TTTGCCAATCGTATT Bphy_1894 2151798 - 2151184 - | hypothetical protein TERM 2282 2151700 - 2151746 + g 70 -5.7 -4.3295 | gap 1, overlap 2151732 GTATTTCGATGTTCC GCCCCACCAGCTGCG-CTCCAG TTGA TTGCAGCCGAGGCAGGTGCGGC TTTGCTTTTCTTCCA Bphy_1895 2152049 - 2151795 - | hypothetical protein Bphy_1896 2152312 - 2152046 - | hypothetical protein Bphy_1897 2152590 - 2152309 - | hypothetical protein Bphy_1898 2152847 - 2152587 - | hypothetical protein Bphy_1899 2153632 - 2152898 - | metallophosphoesterase TERM 2283 2153561 - 2153520 - G 71 -10.2 -3.64822 | gap 2, overlap 2153558 ACCCTCTCATCGAAA CGGAT-CTTCG-CGAGCTCG ATCT CGAGCGCGGCGAAGCAGCCG TGGATGTCGCCGACG Bphy_1900 2154078 - 2153629 - | hypothetical protein Bphy_1901 2154437 - 2154075 - | hypothetical protein TERM 2284 2154453 - 2154490 + r 70 -4.7 -4.46531 | gap 1, opp_overlap 2154466, overlap 2154454 GCCGCGCTCCCGTAC AGCGCCGACG-AAAGCGA ATC TCGCTTAACGCCGCCGCG TTTGATTTTTTGGTT Bphy_1902 2154982 - 2154434 - | hypothetical protein Bphy_1903 2155512 - 2154982 - | hypothetical protein Bphy_1904 2155688 - 2155509 - | hypothetical protein Bphy_1905 2155902 - 2155672 - | hypothetical protein Bphy_1906 2156918 - 2155899 - | GP60 TERM 2285 2156484 - 2156505 + g 93 -10.9 -4.59117 | overlap 2156500 GGTTACTGACGATTC GGGTGCAAT AGCT GTTGCACCC TTTTGTGCTTCGTTT TERM 2286 2156564 - 2156596 + g 72 -8.6 -4.19371 | gap 1, overlap 2156584 2156589 CTTTCGTGTCGACGT TTGCACCCTTTGCAT CTTC AT-CAATGGGTGCAA TTTCTTCACCCTTTG Bphy_1907 2157226 - 2156915 - | hypothetical protein Bphy_1908 2157476 - 2157240 - | hypothetical protein Bphy_1909 2158201 - 2157806 - | hypothetical protein TERM 2287 2158115 - 2158086 - G 74 -11.3 -3.68529 | overlap 2158088 ACGGCATCACGGAAA GACGCGCACGCAG CGAT CTGCTCGCGCGAC AGAAACTTCGCCGAC TERM 2288 2158113 - 2158088 - G 73 -12.5 -3.42395 | overlap 2158086 GGCATCACGGAAAGA CGCGCACGCAG CGAT CTGCTCGCGCG ACAGAAACTTCGCCG TERM 2289 2158240 - 2158224 - R 90 -2.9 -5.71712 | TCCTATAGAAAAAAA CAACCGG ATT CCAACTG GAATTACGACTCGGT TERM 2290 2158268 - 2158292 + r 83 -14.4 -3.05463 | opp_overlap 2158268, overlap 2158272 GGTCAGCACTTCAAA TGAAGGCGTC TCAAT GACGCCTTCA TTCCATGACCGACCT TERM 2291 2158292 - 2158268 - R 88 -14.4 -3.62096 | opp_overlap 2158268 2158272 GGTCAGCACTTCAAA TGAAGGCGTC TCAAT GACGCCTTCA TTCCATGACCGACCT Bphy_1910 2158614 - 2158306 - | hypothetical protein TERM 2292 2158443 - 2158461 + g 93 -6.7 -5.11033 | gap 1, overlap 2158446 GGTGAGCGATTTTCA CGTCGGCA GGAA TGCCG-CG TTTTTTCCAGTTCTG TERM 2293 2159104 - 2159065 - g 76 -9.2 -4.07568 | opp_overlap 2159088, overlap 2159066 2159080 GCTCGGGCCGCAAAA TCTGACAGCTGAAACGCT GGCA AGCGTCGCAGCCGTCGGT GCCGACGTCGCATCG TERM 2294 2159103 - 2159066 - g 72 -12.7 -3.04398 | opp_overlap 2159088, overlap 2159065 2159080 CTCGGGCCGCAAAAT CTGACAGCTGAAACGCT GGCA AGCGTCGCAGCCGTCGG TGCCGACGTCGCATC TERM 2295 2159518 - 2159507 - g 73 -5.8 -4.35524 | CTTGTAAAGGCAAAA GACG GCCG CGTC ATGGTGAAGGAATTC Bphy_1911 2158679 - 2159674 + | putative phage repressor TERM 2296 2159701 - 2159714 + F 100 -9.5 -5.99154 | opp_overlap 2159701 ACCAAGACGACCAAA CCCGC TATG GCGGG TTTTTTTGTTTCATC TERM 2297 2159714 - 2159701 - f 75 -9.5 -3.8505 | opp_overlap 2159701 ACCAAGACGACCAAA CCCGC TATG GCGGG TTTTTTTGTTTCATC TERM 2298 2159790 - 2159750 - f 83 -5.6 -4.89852 | opp_overlap 2159755, overlap 2159757 CCAGACGCAGAAAAA TTAAACACAGTGTTTGAC ATGCG GTTAAACATGGTGTTTAA TACATCTCAAGCGCT TERM 2299 2159847 - 2159861 + F 74 -6.4 -4.5442 | opp_overlap 2159847, overlap 2159842 GCCCTAAGCTCAGAA CATTGC CGC GCAGTG TTTTGTACTTAGAGC Bphy_1912 2160029 - 2160310 + | hypothetical protein Bphy_1913 2160649 - 2160984 + | hypothetical protein TERM 2300 2161124 - 2161108 - g 71 -4.3 -4.53303 | CAGGTGCACAGAAAA GCCCCCT GCA AGATGGC AAGCCGTTCGTCATC Bphy_1914 2161029 - 2161859 + | hypothetical protein TERM 2301 2161894 - 2161916 + F 75 -5.4 -4.65895 | CCGAGCCAGCGCTTT GAGGGTGCGG TCC CGGCCCTCTC TTTTTGAATCGAAGG Bphy_1915 2162051 - 2162797 + | hypothetical protein TERM 2302 2163030 - 2163054 + G 78 -4.1 -4.77438 | GATCGGCTGCATGGC GGCCACCTGCT ACG GGCACGCGGTC TTTTTCCTCCTGGCT Bphy_1916 2162800 - 2163777 + | hypothetical protein Bphy_1917 2163786 - 2165393 + | C-5 cytosine-specific DNA methylase TERM 2303 2165763 - 2165736 - g 74 -11.4 -3.57561 | gap 1, overlap 2165737 GGCGAAGCGCTGAAA CTCGCGGAGAAAT GCC ATTTCCCCGCG-G CGCGAGATATTCCCG Bphy_1918 2165424 - 2166110 + | hypothetical protein TERM 2304 2166213 - 2166252 + G 74 -12.8 -3.29511 | gap 1, overlap 2166214 ATACGGCTATGGGCA AGTCTGGTG-GCGCGACAG GGA CTGGCGCGCGCACCGGGCG TTCTACACGCATCAC TERM 2305 2166214 - 2166251 + G 81 -16.3 -2.57564 | gap 1, overlap 2166213 TACGGCTATGGGCAA GTCTGGTG-GCGCGACAG GGA CTGGCGCGCGCACCGGGC GTTCTACACGCATCA Bphy_1919 2166112 - 2166621 + | hypothetical protein Bphy_1920 2166618 - 2167139 + | methyltransferase putative Bphy_1921 2167136 - 2167333 + | hypothetical protein TERM 2306 2167584 - 2167559 - g 100 -13.3 -5.26918 | ACAGCGCAGAAAAAA GCCCCGCTTCC AATG GAAAGCGAGGC AAGAACTGCGGGCAT Bphy_1922 2167345 - 2167923 + | hypothetical protein Bphy_1923 2168242 - 2167880 - | hypothetical protein Bphy_1924 2168320 - 2169207 + | Gp37Gp68 family protein Bphy_1925 2169596 - 2169255 - | hypothetical protein Bphy_1926 2169668 - 2169889 + | hypothetical protein TERM 2307 2169931 - 2169918 - g 76 -9.5 -4.10632 | AAATAAAGAGAACAA GGGCC TCCC GGCCC GCTGGCGTCAGATTC Bphy_1927 2169889 - 2170941 + | integrase family protein TERM 2308 2171134 - 2171169 + T 100 -8.4 -5.00616 | gap 1, opp_overlap 2171138 2171139, overlap 2171138 2171139 CGCCAGATTCAATGA CAAAG-CCCCGTAATTC AAT GATTTGCGGGGATTTTG TTTTTTCGACCCACA TERM 2309 2171138 - 2171164 + T 95 -7.2 -5.42198 | opp_overlap 2171138 2171139, overlap 2171134 2171139 AGATTCAATGACAAA GCCCCGTAATTC AAT GATTTGCGGGGA TTTTGTTTTTTCGAC TERM 2310 2171139 - 2171163 + T 77 -10.7 -3.83692 | opp_overlap 2171138 2171139, overlap 2171138 2171134 GATTCAATGACAAAG CCCCGTAATTC AAT GATTTGCGGGG ATTTTGTTTTTTCGA TERM 2311 2171325 - 2171307 - T 100 -13.1 -4.42639 | ATACGCCAATGAAAA GCCGCGC ACGAG GCGCGGC TAACGTTACATGCCC Bphy_1928 2172348 - 2171359 - | hypothetical protein Bphy_1929 2172711 - 2172349 - | hypothetical protein Bphy_1930 2173419 - 2172730 - | hypothetical protein TERM 2312 2173258 - 2173246 - G 81 -4.9 -4.9725 | opp_overlap 2173246 AGCCCGATAGAAAAA GAATT CAC AATTC TTGTCACCCTCGACC Bphy_1931 2174776 - 2173403 - | hypothetical protein Bphy_1932 2177573 - 2174817 - | type VI secretion system Vgr family protein TERM 2313 2176310 - 2176331 + g 93 -6.5 -5.11033 | gap 1, opp_overlap 2176308, overlap 2176328 AGCCCGTCACAATCG CCAC-CTCGC CGT GCGAGCGCGG TTTTTTCGCCTTCTG TERM 2314 2177944 - 2177931 - R 100 -9.5 -5.40474 | overlap 2177933 ACGGGCGTAAAAAAA CCGCC AACC GGCGG TTGCCCGCCTACGAC Bphy_1933 2178348 - 2178022 - | hypothetical protein Bphy_1934 2178765 - 2178361 - | hypothetical protein Bphy_1935 2179197 - 2178970 - | phage transcriptional regulator, AlpA TERM 2315 2179340 - 2179314 - R 80 -10.1 -4.08216 | gap 1, opp_overlap 2179330 2179332, overlap 2179279 TGAGGGCTGCGAAAA GGCCG-CACCGC AATT GCGGTGGCCGCC GCCAACACGGCAAAA Bphy_1936 2181561 - 2179543 - | SSS family solute/sodium (Na+) symporter TERM 2316 2180476 - 2180461 - G 74 -4.7 -4.58308 | opp_overlap 2180464, overlap 2180443 2180445 CAGCAACGAAAGAAA GTTGC GCTGGT GCAAC TGGCGCTCGTCTTCG TERM 2317 2180623 - 2180574 - G 77 -15.9 -2.62184 | gap 3, opp_overlap 2180596, overlap 2180602 GCTGCGCCCACACGA TCTGCGCCGTCGCCGCATCGCGCG GAAAG CGCGCGATGCGGCG-CTG-G-AGA TCGGCGATCTCGCGC TERM 2318 2181118 - 2181102 - G 77 -15.1 -2.9039 | overlap 2181093 ACAGGATCGCAGACA GCGCGGC GAG GCCGCGC ACAGCATTGCTCGAA Bphy_1937 2181923 - 2181558 - | membrane protein TERM 2319 2182054 - 2182030 - R 100 -13.6 -4.72272 | opp_overlap 2182029 2182026 2182024 GCGCTCCATGAAAAA CGGCGCATCC GCAGG AGATGCGCCG CTCATTCTTCTACTC Bphy_1938 2184073 - 2182091 - | acetate--CoA ligase TERM 2320 2182295 - 2182313 + g 82 -16 -3.09492 | CCAGTTGCGCAGATC GGCCGCGA TCT TCGCGGCC TCTTCGCCTTCGGGA Bphy_1939 2184468 - 2185367 + | hypothetical protein TERM 2321 2185342 - 2185392 + F 74 -12.5 -3.01791 | CCAGCCTCAAGGCGC GGCGCGTGCCGCCCGTGGC-GTC CTAGCTT GCCGGCCAAGCGCGGC-CGCGCC TGTTCGCGCCGCGCT TERM 2322 2185462 - 2185450 - f 77 -10.5 -3.7941 | opp_overlap 2185452 CACGCTGTACAATAA CGCGC CCA GCGCG CTCCGCCGGCCGGTT Bphy_1940 2185670 - 2186245 + | hypothetical protein Bphy_1941 2186303 - 2187826 + | tartrate/fumarate subfamily Fe-S type hydro-lyase alpha subunit TERM 2323 2187848 - 2187869 + F 100 -13 -5.95946 | opp_overlap 2187848 TGTTTGTTTAGCGAA GCCGGGAC GTGATA GTCCCGGC TTTTTTTATTGTTCG TERM 2324 2187869 - 2187848 - f 76 -13 -3.05384 | opp_overlap 2187848 TGTTTGTTTAGCGAA GCCGGGAC GTGATA GTCCCGGC TTTTTTTATTGTTCG Bphy_1942 2188000 - 2188476 + | bacterioferritin TERM 2325 2188534 - 2188565 + F 100 -12.3 -4.84914 | ACTTCTGCGGTCCGA TCCGCGCAACGTT CCAGGC AGCGCTGCGCGGA TTTTCTTATATGGCT TERM 2326 2189323 - 2189357 + G 70 -5.5 -4.25104 | gap 1, opp_overlap 2189316 ACCAGCAAGGGCTGC GCTCGCCGG-AGCGCG ATAC CGTGCCGCCGCCGCGC TTTTGCTCGACCAGC Bphy_1943 2188575 - 2189486 + | glutamate racemase Bphy_1944 2189724 - 2189960 + | BFD/(2Fe-2S)-binding domain-containing protein TERM 2327 2189991 - 2190028 + F 95 -6.9 -5.38054 | gap 1, opp_overlap 2189995 2190005 2190006, overlap 2190003 2190004 CTTCCCGCGTTTGAA C-GTAGCGTCCGAAATGG CGC CCGTCTCGGGCGCCGCAG TTTTTCTTTGTGCCG TERM 2328 2190003 - 2190027 + F 72 -9.1 -3.81748 | opp_overlap 2189995 2190005 2190006, overlap 2189991 2190004 GAACGTAGCGTCCGA AATGGCGCCCG TCT CGGGCGCCGCA GTTTTTCTTTGTGCC TERM 2329 2190004 - 2190026 + F 74 -12.6 -2.87964 | opp_overlap 2189995 2190005 2190006, overlap 2190003 2189991 AACGTAGCGTCCGAA ATGGCGCCCG TCT CGGGCGCCGC AGTTTTTCTTTGTGC TERM 2330 2190025 - 2190005 - f 83 -13.9 -3.54543 | opp_overlap 2190004 2190003 2189991, overlap 2189995 2190006 ACGTAGCGTCCGAAA TGGCGCCCG TCT CGGGCGCCG CAGTTTTTCTTTGTG TERM 2331 2190024 - 2190006 - f 89 -17.4 -2.72511 | opp_overlap 2190004 2190003 2189991, overlap 2189995 2190005 CGTAGCGTCCGAAAT GGCGCCCG TCT CGGGCGCC GCAGTTTTTCTTTGT TERM 2332 2190846 - 2190810 - g 75 -3.6 -4.74103 | gap 2, opp_overlap 2190839, overlap 2190826 CGTCGAACTGAAAAA GAGCAGCGGCTACGAACG CCT CGACCAG-GCCGC-GCTC GACGCGATTCGATCC Bphy_1945 2190208 - 2190945 + | TonB family protein Bphy_1946 2190984 - 2191715 + | MotA/TolQ/ExbB proton channel Bphy_1947 2191732 - 2192151 + | biopolymer transport protein ExbD/TolR TERM 2333 2192195 - 2192180 - T 72 -4.6 -4.65916 | overlap 2192181 CTGATTCGAAGAAAA GCCCTG TTTT CAGGGT TCAAAGTAAAAGGCC TERM 2334 2192235 - 2192202 - T 83 -15.5 -2.73124 | opp_overlap 2192207, overlap 2192207 TTTCAGGGTTCAAAG TAAAAGGCCTTCATC GTCG GATGAAGGCCTTTTT TCATGCGCACTCGGC TERM 2335 2192207 - 2192230 + T 100 -15.4 -5.14563 | opp_overlap 2192207 2192202 GGGTTCAAAGTAAAA GGCCTTCATC GTCG GATGAAGGCC TTTTTTCATGCGCAC TERM 2336 2192230 - 2192207 - T 100 -15.4 -4.54727 | opp_overlap 2192207, overlap 2192202 GGGTTCAAAGTAAAA GGCCTTCATC GTCG GATGAAGGCC TTTTTTCATGCGCAC Bphy_1948 2193513 - 2192536 - | LysR family transcriptional regulator TERM 2337 2194104 - 2194063 - g 74 -10.7 -3.78775 | CGCGCTATCAGGAAA TGCCGTCTGCGGGCATCCC CGTC GCGACGTCCGACGACGGCA AGGTGCGAGTCAAGG Bphy_1949 2193636 - 2194508 + | pirin domain-containing protein TERM 2338 2194625 - 2194579 - f 79 -13 -3.21772 | opp_overlap 2194585 2194586 2194590, overlap 2194577 2194580 AATTCGTTCACAATA GCGATTCGA-GCCGCGCGGCGC GTTCT GCGCCGCGCGGCATC-ATCCGT TCCAATCCAATGTCC TERM 2339 2194624 - 2194580 - f 85 -16.5 -2.52742 | opp_overlap 2194585 2194586 2194590, overlap 2194579 2194577 ATTCGTTCACAATAG CGATTCGA-GCCGCGCGGCGC GTTCT GCGCCGCGCGGCATC-ATCCG TTCCAATCCAATGTC TERM 2340 2194585 - 2194620 + F 95 -19 -2.53876 | gap 1, opp_overlap 2194580 2194579 2194577, overlap 2194586 2194590 TTCACAATAGCGATT CGA-GCCGCGCGGCGCG TTC TGCGCCGCGCGGCATCA TCCGTTCCAATCCAA Bphy_1950 2194657 - 2195055 + | OsmC family protein Bphy_1951 2195095 - 2195586 + | hypothetical protein TERM 2341 2195593 - 2195616 + F 70 -12.4 -2.71246 | opp_overlap 2195587, overlap 2195591 2195590 TTGCATTAAGTCCTG CGCTGCCTGA CTCC TCGGGCGGCG TCACTTTCCTTGCCT Bphy_1952 2195728 - 2196009 + | hypothetical protein TERM 2342 2196215 - 2196242 + T 100 -13.5 -4.89567 | opp_overlap 2196211 2196215 AACGATAGAAACGAA GCCGTGCAGGT CCAGCC ATCTGCACGGC TTTTGTCTTTTGCGA TERM 2343 2196242 - 2196215 - T 78 -11.3 -3.66968 | opp_overlap 2196215, overlap 2196211 AACGATAGAAACGAA GCCGTGCAGGT CCAGCC ATCTGCACGGC TTTTGTCTTTTGCGA Bphy_1953 2196694 - 2196287 - | hypothetical protein TERM 2344 2196619 - 2196651 + g 79 -14.9 -3.03007 | gap 1, overlap 2196607 TGACGCTCCAGTGAT TCGCCGCCGCGTGC GCTTCA GCG-GCGGCGGCGA TCTTACGGACGTCTT Bphy_1954 2198141 - 2196732 - | putative nitrogen fixation protein VnfA TERM 2345 2196852 - 2196830 - G 81 -11.2 -4.07687 | overlap 2196831 ACGTGCGCCGCAAAA CCCGCGCCGT ATA ACGGCGCGTA ATGAGCCACGCGAGC TERM 2346 2197597 - 2197581 - G 74 -11.5 -3.6502 | overlap 2197549 2197582 GACCTTGTAGTGAAA CGGCGCG AGG CGCGCCA AAAGCGAAAAAACCC TERM 2347 2197623 - 2197610 - G 100 -9.5 -5.2696 | CCAAAAGCGAAAAAA CCCCG TTGA CGGGG CACAGGTATTTACAC TERM 2348 2198095 - 2198048 - G 93 -17.8 -3.52093 | gap 1, opp_overlap 2198075 2198091 2198094, overlap 2198049 AGACGGCAACGACAA CCCACTGGATGCAGCG-GATGGC AGC GCCGTGGCGCTGCATCCAGTGGC CGACCTCTGCAAGCC TERM 2349 2198094 - 2198049 - G 100 -21.3 -2.70774 | gap 1, opp_overlap 2198075 2198091, overlap 2198048 GACGGCAACGACAAC CCACTGGATGCAGCG-GATGGC AGC GCCGTGGCGCTGCATCCAGTGG CCGACCTCTGCAAGC Bphy_1955 2198983 - 2198138 - | iron permease FTR1 Bphy_1956 2199381 - 2199046 - | hypothetical protein TERM 2350 2199421 - 2199398 - R 93 -11.6 -4.57073 | overlap 2199399 CACCCTTCCTAAAAA TGCGGCGCGC TGTC ACGCGCCGCC GACTGCCGTTGTCAC TERM 2351 2199420 - 2199399 - R 87 -15.1 -3.33922 | overlap 2199398 ACCCTTCCTAAAAAT GCGGCGCGC TGTC ACGCGCCGC CGACTGCCGTTGTCA Bphy_1957 2200017 - 2199469 - | hypothetical protein TERM 2352 2199538 - 2199551 + g 75 -9.5 -3.99678 | opp_overlap 2199538 GATCGGCTTGAACCA CGGGC CCAC GCCCG TTTCCTTGTCGACGT Bphy_1958 2202458 - 2200365 - | excinuclease ABC, B subunit TERM 2353 2200454 - 2200467 + g 72 -3.1 -4.63527 | GCATCTGAGCCGCCT TTTCG AATT CGAGA TTTTTCGCGTGCTCC Bphy_1959 2202837 - 2204036 + | aspartate transaminase TERM 2354 2204104 - 2204086 - T 83 -11.7 -3.81146 | opp_overlap 2204086 TGCTGGAACGAAGAA GGCGCTC CTTAT GAGCGCC TTTTTTCGTGCTGCG TERM 2355 2204086 - 2204104 + T 100 -11.7 -5.1861 | opp_overlap 2204086 TGCTGGAACGAAGAA GGCGCTC CTTAT GAGCGCC TTTTTTCGTGCTGCG Bphy_1960 2205397 - 2204144 - | patatin Bphy_1961 2206217 - 2205420 - | 3-hydroxybutyrate dehydrogenase TERM 2356 2206305 - 2206275 - H 77 -11.9 -3.61178 | gap 1, opp_overlap 2206276 2206280, overlap 2206276 CGCAGGCATCGTAAA GCTGACCGAACGGC ATAT GCCGTTCGGTC-GA TTGCTGCACTGCGGC TERM 2357 2206276 - 2206305 + H 83 -14.3 -3.16564 | opp_overlap 2206275 2206276, overlap 2206280 GCAGGCATCGTAAAG CTGACCGAACGGC ATAT GCCGTTCGGTCGA TTGCTGCACTGCGGC TERM 2358 2206304 - 2206276 - H 83 -15.4 -2.76492 | gap 1, opp_overlap 2206276 2206280, overlap 2206275 GCAGGCATCGTAAAG CTGACCGAACGGC ATAT GCCGTTCGGTC-G ATTGCTGCACTGCGG TERM 2359 2206280 - 2206301 + H 84 -15.9 -2.56914 | opp_overlap 2206276 2206275, overlap 2206276 GCATCGTAAAGCTGA CCGAACGGC ATAT GCCGTTCGG TCGATTGCTGCACTG TERM 2360 2206543 - 2206571 + G 71 -8 -4.15044 | overlap 2206544 GCCGCACGGGAATCG CTGGCGGCCGCG CGCGA CGCGGGCGTCAA TTTCTTCGACAACGC Bphy_1962 2206435 - 2207406 + | aldo/keto reductase TERM 2361 2208149 - 2208136 - g 75 -8.1 -4.23674 | TCCTATGAAGACAAA CGCGA TTAC TCGCG AACCCTGACTTGCGT TERM 2362 2208438 - 2208395 - g 90 -11.6 -4.43208 | gap 1, overlap 2208432 2208433 AGATGTTGAAAGAAA CGCTGCCGTG-GCTCGTCGAG ACA CTCGGCGAGGACAAGGCCGCG CAGTTCAAGATCGAA Bphy_1963 2207623 - 2208468 + | hypothetical protein Bphy_1964 2209513 - 2208479 - | NMT1/THI5-like domain-containing protein Bphy_1965 2210012 - 2209671 - | hypothetical protein TERM 2363 2210154 - 2210139 - R 83 -11.8 -3.91144 | TCCACATGTGACAAA GCCCCG CATG CGGGGC TTGACGTCGCGACTC Bphy_1966 2210362 - 2210216 - | hypothetical protein Bphy_1967 2211069 - 2210644 - | MerR family transcriptional regulator TERM 2364 2211114 - 2211132 + H 79 -13.2 -3.24188 | TTGCATGATTCTTGA CCTTCCCA CTG TGGGAAGG TTAATCATGATATGG Bphy_1968 2211202 - 2211411 + | heavy metal transport/detoxification protein Bphy_1969 2211427 - 2212347 + | dTDP-4-dehydrorhamnose reductase Bphy_1970 2215500 - 2212351 - | DNA polymerase III, alpha subunit TERM 2365 2213524 - 2213505 - G 71 -4.2 -4.56597 | gap 1, opp_overlap 2213507 2213508 2213518, overlap 2213506 2213507 CCTGCTCCTGAAAAA TCGGCACGC CCA GCGTGC-GT TTGAGCGCGATTTTC TERM 2366 2214701 - 2214691 - G 72 -8.2 -4.19817 | opp_overlap 2214694, overlap 2214692 TTGATCGAGCGAAAA CGCG CAG CGCG ACAGCACGCTGATGG Bphy_1971 2216974 - 2215505 - | hypothetical protein Bphy_1972 2217611 - 2216904 - | hypothetical protein TERM 2367 2217205 - 2217178 - GR 74 -11.2 -3.53224 | overlap 2217165 2217179 GACTGCGCGGCCAAA TGCAGGCGCCGC AGCG ACGACGCCTGCG CGTGCTGCGCCCACA TERM 2368 2217204 - 2217179 - GR 80 -14.7 -2.71791 | overlap 2217165 2217178 ACTGCGCGGCCAAAT GCAGGCGCCGC AGCG ACGACGCCTGC GCGTGCTGCGCCCAC TERM 2369 2217248 - 2217228 - GR 73 -11.1 -3.41745 | opp_overlap 2217238 CGCCCACAAGATCAA CGCGCCG CAGGTGC CGGCGCG CAAGATCTGCTCGGC TERM 2370 2217643 - 2217628 - R 72 -6.2 -4.25658 | opp_overlap 2217628, overlap 2217625 AGCGTAGGAAAATAA CTGTAT ATTT ATACAG TATCCTACACGGAAA TERM 2371 2217906 - 2217890 - R 72 -5.8 -4.54553 | GACAAATATAAGAAA GGACGA ATCGA TCGCCC ATGTCATCAGAAGAA TERM 2372 2218035 - 2218000 - R 100 -16.2 -3.86015 | opp_overlap 2218006 CATCGGCCGCACAAA CGCCAAGACCCCGC TTTTGAGG GCGGGGTCTTGGTG ATGGGTAAGGAGCCT TERM 2373 2218006 - 2218029 + r 75 -12.4 -3.22298 | opp_overlap 2218000 CCGCACAAACGCCAA GACCCCGCTT TTGA GGGCGGGGTC TTGGTGATGGGTAAG TERM 2374 2220686 - 2220697 + r 71 -7.2 -4.2354 | AGGATCTGTTTCACT CCCC TCCC GGGG TTCTTTTCGCCTTTC Bphy_1973 2224928 - 2223780 - | hypothetical protein TERM 2375 2224186 - 2224167 - G 100 -2.8 -5.96219 | overlap 2224185 CACCGACAAAAAAAA CGTCGC GAGCCCGA GCAACG CCGGCGCGGGCACAC TERM 2376 2225637 - 2225609 - g 76 -13.8 -3.14132 | overlap 2225589 CGCCTCGCGCAGCAA CTGGCGCAGGCG GCCGT CGCCGGCGCCAA CGCGAAGATCAATTT Bphy_1974 2225120 - 2226334 + | hypothetical protein TERM 2377 2226366 - 2226384 + F 100 -13.1 -5.61596 | opp_overlap 2226365 2226362 TCTGTATCGAATCAG GCCCCGC CGCGC GCGGGGC TTTTTTTATGGCACT Bphy_1975 2226533 - 2227414 + | two component LuxR family transcriptional regulator Bphy_1976 2227508 - 2228182 + | hypothetical protein TERM 2378 2228998 - 2228980 - g 79 -2.2 -5.06414 | overlap 2228953 2228950 2228982 2228990 GTCGGGCAACAAAAA GTCGGGCA AAT CGTCCGGC AAGGCCGTGACGACC TERM 2379 2229011 - 2228990 - g 74 -10.9 -3.5771 | gap 1, overlap 2228982 2228980 2228953 2228950 AAAAAGTCGGGCAAA TCGTC-CGGC AAG GCCGTGACGA CCAAGAGCAGCAGCA Bphy_1977 2228399 - 2229058 + | hypothetical protein TERM 2380 2229113 - 2229141 + T 100 -11.7 -4.63184 | opp_overlap 2229114, overlap 2229114 CGCATGATCAACAAA ACGAGGCCACG CATTCCA CGTGGCCTCGC TTTTTCGCATACCTT TERM 2381 2229140 - 2229114 - T 100 -16.6 -4.73613 | opp_overlap 2229114 2229113 GCATGATCAACAAAA CGAGGCCACGCA TTC CACGTGGCCTCG CTTTTTCGCATACCT TERM 2382 2229114 - 2229140 + T 87 -15.2 -3.37188 | opp_overlap 2229114, overlap 2229113 GCATGATCAACAAAA CGAGGCCACG CATTCCA CGTGGCCTCG CTTTTTCGCATACCT Bphy_1978 2230357 - 2229191 - | peptidase M14 carboxypeptidase A Bphy_1979 2231169 - 2230387 - | hypothetical protein TERM 2383 2230669 - 2230681 + g 80 -4.7 -4.80853 | GCAATTGATCAGCAC GCGCG AGC CGCCC TTCTTTTTTTCCAGT TERM 2384 2231494 - 2231454 - g 88 -15.4 -3.31144 | gap 1, opp_overlap 2231460, overlap 2231469 TCCGCAGTTCGAGAA GCGCG-CCGTCGACAAGGC CGCT GCGCTGGCGACGGTCGCGC GCCTCTCGACGTTCG Bphy_1980 2231227 - 2231742 + | hypothetical protein Bphy_1981 2231820 - 2233010 + | aminotransferase class I and II Bphy_1982 2233764 - 2233117 - | glutathione S-transferase domain-containing protein Bphy_1983 2233897 - 2235477 + | 3-hydroxybutyryl-CoA dehydrogenase TERM 2385 2235783 - 2235823 + G 88 -9.6 -4.66163 | gap 1 CAGGCGTCGTCGAAG CCGGTAATCGCTGCCGTCG AAGG CG-CGGCGGCGGGTGCAGG TTTTTCGCTGGCGCT TERM 2386 2236163 - 2236184 + G 79 -10.9 -3.89822 | gap 1, opp_overlap 2236123, overlap 2236125 GTCGCTGCCCGATCA GCTCGTCGCG GAG CGCGAC-AGC TTTGTCGCGTCGCTG Bphy_1984 2235477 - 2236265 + | enoyl-CoA hydratase/isomerase Bphy_1985 2236262 - 2236984 + | phosphoglycerate mutase Bphy_1986 2237018 - 2238124 + | aminoglycoside phosphotransferase Bphy_1987 2238198 - 2239436 + | acyl-CoA dehydrogenase domain-containing protein TERM 2387 2240028 - 2240016 - g 76 -6.2 -4.50193 | overlap 2240007 ACGAACGAAGCAAAA CGCC TCTAC GGCG TGATAGATACGCAAC TERM 2388 2240212 - 2240179 - g 75 -7.3 -4.24342 | gap 1, overlap 2240180 GCTGGCACGAAGAAA TCGCCGCGCGCCCCGC CGT GCAACGCG-GCGTCGA AGTGCTGGCGTCGGC Bphy_1988 2239596 - 2240297 + | glutathione S-transferase domain-containing protein Bphy_1989 2240812 - 2240336 - | dehydratase Bphy_1990 2241267 - 2240809 - | dehydratase Bphy_1991 2242428 - 2241301 - | acyl-CoA dehydrogenase domain-containing protein Bphy_1992 2243635 - 2242439 - | acyl-CoA dehydrogenase domain-containing protein TERM 2389 2243071 - 2243093 + g 81 -7.7 -4.57073 | TTTTCATGTCGATCA GCAGGAACG AAATG CCTTCCTGC TTTTTCGCGCCGCTG Bphy_1993 2244134 - 2243691 - | hypothetical protein TERM 2390 2244346 - 2244314 - R 100 -14.2 -4.63527 | opp_overlap 2244321 2244343, overlap 2244315 CCACGAGCGCAAAAA GCGAAAACGGCAGC GCAAG GCTGCCGTTCTCGT TCGACACCGAACGGT TERM 2391 2244345 - 2244315 - R 93 -17.7 -3.37634 | opp_overlap 2244321 2244343, overlap 2244314 CACGAGCGCAAAAAG CGAAAACGGCAGC GCAAG GCTGCCGTTCTCG TTCGACACCGAACGG TERM 2392 2244321 - 2244339 + r 77 -11.7 -3.50853 | opp_overlap 2244315 2244314 CGCAAAAAGCGAAAA CGGCAGC GCAAG GCTGCCG TTCTCGTTCGACACC Bphy_1994 2244965 - 2244375 - | NUDIX hydrolase TERM 2393 2245014 - 2244988 - R 70 -12.3 -2.83403 | gap 1, opp_overlap 2244988 2244987, overlap 2244987 2245005 CCCTTTGCAGCAAAG GGCGC-GACGGC CGAA ACCGTCAGCGCC GTTTGACGAGATATT Bphy_1995 2245303 - 2245007 - | hypothetical protein Bphy_1996 2246781 - 2245303 - | proton-translocating NADH-quinone oxidoreductase, chain N Bphy_1997 2248300 - 2246807 - | proton-translocating NADH-quinone oxidoreductase, chain M Bphy_1998 2250392 - 2248323 - | proton-translocating NADH-quinone oxidoreductase, chain L Bphy_1999 2250716 - 2250411 - | NADH-ubiquinone oxidoreductase chain 4L Bphy_2000 2251404 - 2250736 - | NADH-ubiquinone/plastoquinone oxidoreductase chain 6 TERM 2394 2251483 - 2251514 + r 70 -12.2 -2.82015 | gap 1, overlap 2251500 TTGTGTTGCTCGACG CCGCGCCGGAGCGGT CTG GCTGCGCCG-CGCGG TCTCATGCCTGTCAG Bphy_2001 2252052 - 2251564 - | NADH-quinone oxidoreductase, chain I Bphy_2002 2253131 - 2252067 - | NADH dehydrogenase (quinone) Bphy_2003 2255465 - 2253132 - | NADH-quinone oxidoreductase, chain G Bphy_2004 2256889 - 2255561 - | NADH-quinone oxidoreductase, F subunit Bphy_2005 2257371 - 2256886 - | NADH-quinone oxidoreductase, E subunit Bphy_2006 2258795 - 2257542 - | NADH dehydrogenase I, D subunit Bphy_2007 2259407 - 2258805 - | NADH (or F420H2) dehydrogenase, subunit C Bphy_2008 2259905 - 2259426 - | NADH-quinone oxidoreductase, B subunit Bphy_2009 2260339 - 2259968 - | NADH-ubiquinone/plastoquinone oxidoreductase chain 3 TERM 2395 2260050 - 2260036 - G 79 -4.3 -4.91511 | ATTCGAGCAGAAAAA TCATC ATCGA GATGA AGCCGGGCCAGCCGA TERM 2396 2260192 - 2260208 + g 70 -5.8 -4.23999 | opp_overlap 2260160, overlap 2260191 CGAAAGCTTCGAAGC CGCACT CATAC GGTGCG TTCTTTTCGGTGTCC TERM 2397 2260488 - 2260458 - R 74 -7.5 -4.3208 | gap 1, opp_overlap 2260458 CCCCAGAAGTGAAAA TGCCAGCCG-AAGC TGAA GCAAGCGGCTGGCA TTAGATAACATTGGT TERM 2398 2260684 - 2260696 + r 70 -4.9 -4.41616 | CAACGCACAAACGTG TTTTC CTC GAAAA TTTATTTCGGCACGT Bphy_2010 2261090 - 2260698 - | preprotein translocase, SecG subunit Bphy_2011 2261956 - 2261177 - | Triose-phosphate isomerase TERM 2399 2262122 - 2262103 - R 85 -11.4 -3.98173 | TCAAACTCAATTAAA CGAGCGCT GTCA AGCGCCCG CGCCCCAATTCAGCA Bphy_2012 2263128 - 2262112 - | PIG3 family NAD(P)H quinone oxidoreductase TERM 2400 2262761 - 2262726 - G 72 -3.3 -4.59773 | gap 1 TTGCACGGTCAAAAA CATTGCTCCAGACCGT GAAGA ACGTTTCGG-GCAATG CCGCCGCTTCGATAT TERM 2401 2263240 - 2263212 - R 100 -16 -4.80882 | gap 1, opp_overlap 2263206 ACCCTACATGAAAAA CGGCCGGC-GCGC TTTT GCGCTACCGGCCG TCCCGCTTTCACCGC Bphy_2013 2265395 - 2263257 - | polyribonucleotide nucleotidyltransferase TERM 2402 2265316 - 2265331 + g 77 -11.8 -3.64703 | overlap 2265305 2265304 2265330 GCACCGCTCGCCTGG CGGGCG ATTT CGCCCG TTTCCATGCGAACCG TERM 2403 2265684 - 2265646 - R 100 -18.4 -4.58395 | opp_overlap 2265649 2265651, overlap 2265651 CGCACCGTTGAAAAA CAAAATGCCTGTATCAGC GGA ACTGACACAGGCATCTTG CTGACAGAAAGTCCG TERM 2404 2265651 - 2265679 + r 73 -11.8 -3.13403 | opp_overlap 2265646 2265651, overlap 2265649 CGTTGAAAAACAAAA TGCCTGTATCAG CGGAA CTGACACAGGCA TCTTGCTGACAGAAA TERM 2405 2265679 - 2265651 - R 100 -14.7 -5.26119 | opp_overlap 2265651 2265649, overlap 2265646 CGTTGAAAAACAAAA TGCCTGTATCAGC GGA ACTGACACAGGCA TCTTGCTGACAGAAA Bphy_2014 2265979 - 2265710 - | ribosomal protein S15 Bphy_2015 2267418 - 2266147 - | branched chain amino acid ABC transporter periplasmic ligand-binding protein Bphy_2016 2267600 - 2268124 + | putative lipoprotein TERM 2406 2268217 - 2268204 - T 100 -9.5 -4.93296 | opp_overlap 2268204 CGACGACGATAAAAA CCCGC CATT GCGGG TTTTTTATCGCGGCC TERM 2407 2268204 - 2268217 + T 100 -9.5 -5.24129 | opp_overlap 2268204 CGACGACGATAAAAA CCCGC CATT GCGGG TTTTTTATCGCGGCC Bphy_2017 2269801 - 2268251 - | 2-isopropylmalate synthase TERM 2408 2270025 - 2270045 + r 74 -2.6 -4.88293 | overlap 2270021 GACTATAGCGGCAAT CCTGAATT CGTGC AATTGAGG TTTGTTTTTGCCCTT Bphy_2018 2271135 - 2270263 - | CDP-diacylglycerol--serine O-phosphatidyltransferase Bphy_2019 2271794 - 2271156 - | phosphatidylserine decarboxylase related protein TERM 2409 2271837 - 2271866 + r 90 -10 -4.62471 | gap 1, opp_overlap 2271837 CGTAGGATAGCAAAA GCCGCCCAGG-GT TCAGC ACACCTGGACGGC TTTTTGAGGCTTCCG TERM 2410 2271866 - 2271837 - R 93 -12.2 -4.371 | gap 1, opp_overlap 2271837 CGTAGGATAGCAAAA GCCGCCCAGG-GT TCAGC ACACCTGGACGGC TTTTTGAGGCTTCCG Bphy_2020 2272935 - 2271919 - | ketol-acid reductoisomerase TERM 2411 2272451 - 2272467 + g 75 -7.9 -4.27117 | opp_overlap 2272443 TACGACAGCGCGATG TCGCGCG CTG CGCCCGA TTTGTCTTGTGCAAC Bphy_2021 2273526 - 2273035 - | acetolactate synthase, small subunit Bphy_2022 2275395 - 2273638 - | acetolactate synthase, large subunit, biosynthetic type TERM 2412 2275699 - 2275711 + H 79 -6.9 -4.57569 | overlap 2275700 AGGCTGGATGCAAGG TGCGG GTG CCGCG TTTTTCCCCGGATCG TERM 2413 2275960 - 2275978 + G 83 -5.8 -4.87803 | overlap 2275961 AAATACGGCGATCGT CCGGCTGC TGA GCTGCCGC TTTTGTTTCAGCGTA TERM 2414 2276220 - 2276206 - g 78 -4.2 -4.82855 | GACGAAATCCAAAAA TTGCCG GCA CGTCAA CGGGAGGCGTTTCTG Bphy_2023 2275810 - 2276373 + | ECF subfamily RNA polymerase sigma-24 factor TERM 2415 2276541 - 2276510 - g 71 -10 -3.61398 | opp_overlap 2276504 2276519 2276523 CCTCGCTCGCAAGAA GCCCGAAGCCGTGC AGGC GCCCGTCTTCGCGC CCGTGTTCGTCGGCG Bphy_2024 2276370 - 2276801 + | hypothetical protein TERM 2416 2277261 - 2277241 - g 73 -12.5 -3.34013 | CAGGTGTCGAAGGAA CTGCCGCGC GAG GCGCGCCAG AGCGCGTGGAAGGCG TERM 2417 2277325 - 2277309 - g 71 -10.1 -3.61812 | overlap 2277303 AGAACAGAAGCAGAA GCTCGCC GCC AGCGAGC ACAAGCGGCGGCCGA TERM 2418 2277358 - 2277330 - g 70 -11 -3.4252 | gap 1, overlap 2277303 CGCCAGCGAGCACAA GCGGCG-GCCGAC CGTC GTCAGCGCACCGC CGTCGGGCAAATCCG TERM 2419 2277497 - 2277509 + G 71 -9.1 -3.73224 | GCGCGCCCGCGATTC CTGCC GCC GGCAG TTTCGTGCCGGCTAC Bphy_2025 2276818 - 2277576 + | putative transmembrane protein Bphy_2026 2277634 - 2278167 + | RDD domain-containing protein TERM 2420 2278219 - 2278229 + F 87 -8.2 -4.81851 | overlap 2278211 2278206 TGCCGCGCGTCGATG CCGG TTT CCGG TTTTTCGCTTTCACT TERM 2421 2279412 - 2279386 - g 70 -13.7 -2.5194 | gap 1, opp_overlap 2279388, overlap 2279385 TAATGACGGACGAAG CG-CGCCGCCGC GGCT GCGACGGCGTCG TGTGCGGGCATATTC Bphy_2027 2278656 - 2279603 + | metallophosphoesterase Bphy_2028 2279638 - 2280669 + | glycosyl transferase group 1 TERM 2422 2281156 - 2281172 + G 75 -2.9 -4.84359 | GACGTTGGCTGCGAT TCTCGTG CCG TGCGGGA TTTTTGTGCCCGTCG TERM 2423 2281329 - 2281349 + G 100 -8.9 -5.07275 | opp_overlap 2281321 CCAAGGATCTCGGCA GTGCGGCCG TGA TGGTCGCGC TTTTTATCTGTGTGA Bphy_2029 2280899 - 2281426 + | diacylglycerol kinase TERM 2424 2281619 - 2281600 - f 77 -10.6 -3.85698 | overlap 2281573 CGCGCGCCGCACAAA CGGGCGTG TCAA CCCGCCCG TCAACCCCCCTGGGC Bphy_2030 2281643 - 2282359 + | TetR family transcriptional regulator Bphy_2031 2282362 - 2282946 + | hypothetical protein TERM 2425 2283132 - 2283114 - g 79 -5.8 -4.64861 | overlap 2283098 2283115 2283116 CGGCCGCAAAAGAAA CGGCCGCC GAA GTCGGACG TGCGGGCGGGCACGC Bphy_2032 2282987 - 2283733 + | short-chain dehydrogenase/reductase SDR TERM 2426 2283757 - 2283805 + F 88 -10.2 -4.55887 | gap 1, opp_overlap 2283767 2283768, overlap 2283758 TCTTCCCTCTTCCTT CCCCGCAGAATGCACGGCGCTTC GTCA GAAGCGGCGTGCGT-CAGCGCGC TTTCTCTTTTTCGCG TERM 2427 2283758 - 2283804 + F 82 -13.7 -3.32448 | gap 1, opp_overlap 2283767 2283768, overlap 2283757 CTTCCCTCTTCCTTC CCCGCAGAATGCACGGCGCTTC GTCA GAAGCGGCGTGCGT-CAGCGCG CTTTCTCTTTTTCGC TERM 2428 2283796 - 2283767 - f 75 -12.1 -3.28712 | opp_overlap 2283758 2283757, overlap 2283768 TCCTTCCCCGCAGAA TGCACGGCGCTTC GTCA GAAGCGGCGTGCG TCAGCGCGCTTTCTC TERM 2429 2283795 - 2283768 - f 81 -15.6 -2.57132 | opp_overlap 2283758 2283757, overlap 2283767 CCTTCCCCGCAGAAT GCACGGCGCTTC GTCA GAAGCGGCGTGC GTCAGCGCGCTTTCT TERM 2430 2284604 - 2284622 + G 71 -8 -4.11371 | overlap 2284593 GGACGTCGCGCTAAT GGCGGGCG CCG CGCTCGGC TTTTGCGGACTGTTC Bphy_2033 2283990 - 2285936 + | hypothetical protein Bphy_2034 2286594 - 2285959 - | hypothetical protein TERM 2431 2286605 - 2286628 + r 83 -4.4 -5.10163 | gap 1, opp_overlap 2286599, overlap 2286616 CTCATGCAAGCTCCA GCACGAGC-CG CCG CGTGCGCGCGC TTTTCTTTTCGAGTT Bphy_2035 2287322 - 2286591 - | threonyl/alanyl tRNA synthetase SAD TERM 2432 2287661 - 2287678 + r 74 -6.3 -4.4715 | opp_overlap 2287661 CTATCATGCAATGTA CTCTGCA TTTA TGTAGAG TTTTCTACCTTACCA Bphy_2037 2288993 - 2288052 - | copper resistance D domain-containing protein Bphy_2038 2289367 - 2288993 - | copper resistance protein CopC Bphy_2039 2289774 - 2289427 - | hypothetical protein Bphy_2040 2291135 - 2289840 - | multicopper oxidase type 3 Bphy_2041 2292643 - 2291138 - | outer membrane efflux protein TERM 2433 2291785 - 2291804 + g 72 -8.6 -4.18018 | gap 1 GTGTTCTCAGTTTCG CCGCCT-GA ATA TCGAGGCGG TTTTGCATCGCAAAG Bphy_2042 2292933 - 2292640 - | hypothetical protein Bphy_2043 2293413 - 2293021 - | hypothetical protein Bphy_2044 2293699 - 2294919 + | permease Bphy_2045 2294942 - 2295340 + | hypothetical protein Bphy_2046 2296076 - 2296738 + | LemA family protein Bphy_2047 2296735 - 2297586 + | hypothetical protein Bphy_2048 2297583 - 2298086 + | hypothetical protein Bphy_2049 2298754 - 2298329 - | globin TERM 2434 2298703 - 2298665 - G 81 -10.9 -4.10161 | gap 1, opp_overlap 2298680 CATCAGGTCGTAAAA GCGGTCGACGAGTTCGCG CACG CGCGC-CTCGCCGCCCAC GAGTTCGAAGGCGGT Bphy_2050 2301411 - 2298799 - | hypothetical protein TERM 2435 2299991 - 2299946 - G 88 -9.5 -4.66163 | gap 1, overlap 2299948 ATGCCGATGGAAAAA CGCTCGCTGCGC-ACGATGCGC GCC GCGCCCCACAGCGCCGCACGCG CGATCAGCGCGAACA TERM 2436 2300914 - 2300951 + g 76 -14.2 -3.14878 | gap 1, overlap 2300912 GGACGGCGGAATGCC TCGCACTTCGCGATCGG GTGCG CCGGACGCG-AGTGCGA TCTTCAATTCGCCGC Bphy_2051 2302019 - 2301408 - | putative transmembrane protein TERM 2437 2302170 - 2302192 + r 82 -9.1 -4.5366 | TCCGTCTCATTATAG CTAGCCCGC GTGGG GTGGGCTGG TTTTGGGTTTTTTGG TERM 2438 2302312 - 2302299 - R 79 -5.9 -4.86731 | overlap 2302300 2302302 2302303 CCGCGGCAAAGAAAA GCAGC GGCG GCCGC GTACAGCGGCAACGC TERM 2439 2302401 - 2302381 - R 81 -3.2 -5.29846 | gap 1, overlap 2302382 2302384 AAGCCCAAAGAAAAA CCAGACGCG GGAC CGCGTC-GC ACACAAAACCCGTTA Bphy_2052 2302734 - 2302414 - | small multidrug resistance protein Bphy_2053 2303581 - 2302883 - | two component transcriptional regulator Bphy_2054 2306427 - 2303578 - | osmosensitive K+ channel signal transduction histidine kinase TERM 2440 2303726 - 2303765 + g 100 -17.8 -4.08767 | opp_overlap 2303717 2303718 CAGAAACGCGCGCCC TCGACGCGGCCATCGGCA GCGA TGCGGTTGGCCGCGCCGA TTTTACCGCCATGCG TERM 2441 2306358 - 2306370 + g 93 -3.3 -5.34365 | overlap 2306359 AGAAGATCTTGAGCT TGCCG CGC TGGCG TTTTTCTTCTTCTCG TERM 2442 2307204 - 2307165 - R 89 -4.3 -5.60864 | gap 2, overlap 2307168 2307172 2307173 CAGACATCAAAAAAA GCATTAACCTCGCTGCGCG TCAT CGAGC-GCGAGATTGA-GC TCAAGTACATTCACC Bphy_2055 2307749 - 2307168 - | potassium-transporting ATPase, C subunit Bphy_2056 2309888 - 2307804 - | K+-transporting ATPase, B subunit Bphy_2057 2311751 - 2309946 - | potassium-transporting ATPase, A subunit TERM 2443 2311770 - 2311722 - G 75 -3.2 -4.78107 | CACGACGATGAAAAA TGCCGGCTGCAGGACATTG-TTGA GGC TCATTCAATGTCCTCC-GCGCGCA GCAGCGCATAGACGA Bphy_2058 2311840 - 2311748 - | K+-transporting ATPase, F subunit Bphy_2059 2311950 - 2311840 - | hypothetical protein TERM 2444 2311930 - 2311920 - G 74 -2.4 -4.7373 | overlap 2311903 TCAGCGCAGCAAAAA GCGC GAT GCCC CCGACGTACAGCACA TERM 2445 2312103 - 2312045 - R 83 -5.1 -5.05782 | gap 1, opp_overlap 2312046 2312060, overlap 2312056 2312057 AGTGAGTGTAAAAAA CCCGTAAACAACCGAGGGAGCCGCCGGC TGCC ACCGGTGGCTCCCTCGTCTACGCGCAG- TATTGATGTGCAGTC TERM 2446 2312093 - 2312056 - R 100 -19.1 -3.95674 | opp_overlap 2312046 2312060, overlap 2312045 2312057 AAAACCCGTAAACAA CCGAGGGAGCCGCCGGC TGCC ACCGGTGGCTCCCTCGT CTACGCGCAGTATTG TERM 2447 2312092 - 2312057 - R 100 -22.6 -2.9632 | opp_overlap 2312046 2312060, overlap 2312056 2312045 AAACCCGTAAACAAC CGAGGGAGCCGCCGGC TGCC ACCGGTGGCTCCCTCG TCTACGCGCAGTATT TERM 2448 2312060 - 2312089 + r 95 -18.6 -2.62263 | opp_overlap 2312057 2312056 2312045, overlap 2312046 CCCGTAAACAACCGA GGGAGCCGCCGG CTGCCA CCGGTGGCTCCC TCGTCTACGCGCAGT Bphy_2060 2313153 - 2312179 - | alcohol dehydrogenase Bphy_2061 2313607 - 2313218 - | methylglyoxal synthase Bphy_2062 2314458 - 2313679 - | short-chain dehydrogenase/reductase SDR TERM 2449 2314415 - 2314434 + g 70 -6.3 -4.26903 | overlap 2314416 CCCAGCCCCTTGCTC GCCGCGC ACACGA GCGCGGA TTTTCCTGCGATGCC TERM 2450 2315210 - 2315222 + G 85 -7.7 -4.60487 | overlap 2315181 CCGCGGCGTCGCGGG CGAGA ACA TCTCG TTTTTGGCGCTCGTG Bphy_2063 2314737 - 2315387 + | uracil phosphoribosyltransferase TERM 2451 2315400 - 2315418 + F 85 -3.1 -5.40072 | gap 1 TAAGGTTTGCACCAT CGG-GACG CGGG CGTTGCCG TTTTTTTGGGGGGCG Bphy_2064 2315752 - 2316480 + | hypothetical protein TERM 2452 2316615 - 2316631 + F 78 -6.5 -4.56597 | CATGGCGCATACATG GCCGC ATGGTTC GCGGC TTTTTCCGCCACAAC TERM 2453 2316707 - 2316744 + F 87 -7.5 -4.87626 | overlap 2316708 CGAAGGTAAAGATGG ACATCCACGGCTCGCGC CAGT GCGCGGGCCGTTCACGG TTTTTAGTATTCGGG TERM 2454 2316708 - 2316743 + F 74 -11 -3.51853 | overlap 2316707 GAAGGTAAAGATGGA CATCCACGGCTCGCGC CAGT GCGCGGGCCGTTCACG GTTTTTAGTATTCGG Bphy_2065 2316767 - 2318044 + | phosphoribosylamine--glycine ligase Bphy_2066 2318306 - 2319238 + | coproporphyrinogen oxidase Bphy_2067 2319245 - 2320006 + | nicotinate (nicotinamide) nucleotide adenylyltransferase Bphy_2068 2320009 - 2320467 + | iojap-like protein Bphy_2069 2320535 - 2321005 + | hypothetical protein TERM 2455 2321073 - 2321056 - f 79 -12.7 -3.28924 | opp_overlap 2321064 CATCCCTGCGCACAA CCTGGCC GGAT GGCCAGG TGCGCGCCGCCCTTC Bphy_2070 2321166 - 2321792 + | maf protein TERM 2456 2322444 - 2322467 + G 81 -12.4 -3.85698 | overlap 2322445 TATCAGGATCTGAAT CTCGCGCAGC GCGT GCTGCGCGAC TTTGTCAACGACGAG TERM 2457 2322445 - 2322466 + G 80 -15.9 -2.91276 | overlap 2322444 ATCAGGATCTGAATC TCGCGCAGC GCGT GCTGCGCGA CTTTGTCAACGACGA TERM 2458 2322888 - 2322860 - g 77 -13.1 -3.39803 | CATCGACATGGAGAA CTCCGAGCATCGG GAT CAGGTGCTCGGAG AACTGAAGAAGGCGC TERM 2459 2322996 - 2322974 - g 71 -10.5 -3.65353 | opp_overlap 2322973, overlap 2322964 2322967 CGAAATGACGCGAAA GCGCACGCG TGAAT CGCTTGCGC ATGTGCTGTGCGAGC Bphy_2071 2321802 - 2323271 + | ribonuclease Bphy_2072 2323348 - 2323536 + | hypothetical protein Bphy_2073 2323738 - 2323899 + | hypothetical protein Bphy_2074 2324026 - 2324322 + | hypothetical protein Bphy_2075 2325604 - 2324306 - | O-antigen polymerase TERM 2460 2325099 - 2325089 - G 74 -4.6 -4.53303 | CAGCGCCAGATAAAA CAGC AGC GCCG TCATGATGCCTGCCG TERM 2461 2325672 - 2325697 + r 85 -9.6 -4.4727 | overlap 2325670 GCTCGCTGCGTCAGT GGCGCCTGCC TCTTTC GGCCGGTGCC TTTTGTCGATCTTGC Bphy_2076 2326826 - 2325852 - | glycosyl transferase group 1 TERM 2462 2326365 - 2326347 - G 76 -13.8 -3.06183 | CGTATCGCGACTCAA GCGGCCGA CGA CCGGCCGC GCATGCGCTGCATGC TERM 2463 2326647 - 2326629 - G 82 -16 -3.12449 | opp_overlap 2326624 2326635, overlap 2326625 2326623 GCCGACGAACACATA CGTGCCGC CGT GCGGCACG CTCGCCTTGTGCGGC TERM 2464 2326880 - 2326910 + r 84 -12.6 -3.64466 | gap 2 TGGCAGCGGCGGGTG CGCCCGCATGCGGC GCTGG GCCGC--GCGGGCG TTCTCTCTATCGGAT Bphy_2077 2328735 - 2326942 - | lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA TERM 2465 2329153 - 2329116 - g 100 -12 -4.78107 | gap 1, overlap 2329118 2329138 CATCATCACGAAAAA CG-CGGCGCTCAGGC TCGACGAAT GCCTGCGCGCCGTCG CGTTCGCCGACGAGA TERM 2466 2329298 - 2329278 - g 100 -9.6 -5.40072 | opp_overlap 2329283 CGGTCCGCAAAAAAA CCGTGCGC TGGAC GCGCTCGG CACGACCTGGGTGCT Bphy_2078 2329075 - 2329842 + | glycosyl transferase family protein Bphy_2079 2333446 - 2329883 - | DNA polymerase III, alpha subunit TERM 2467 2329936 - 2329916 - G 72 -8.2 -4.07568 | opp_overlap 2329916 CGCGCTGCCCGAAAA CTCGCGGC GCAAT GCGGCGAG CAGTTCGTCCGTCGG TERM 2468 2330111 - 2330091 - G 81 -13.9 -3.53444 | opp_overlap 2330083 CCATTGCCGCCGAAA CCGCCGCGG GCA CCGCTGCGG GGAGCCGGCGCAGCG TERM 2469 2330870 - 2330889 + g 72 -6.4 -4.20783 | overlap 2330877 ATCGACGAACGGGCC TTCTTCGC GCGC GCGCAGAA TTTCTTCGATCGCGT TERM 2470 2331650 - 2331683 + g 73 -5.9 -4.43477 | gap 1, opp_overlap 2331644 2331645, overlap 2331652 GATCGAGAACGCCGC CGGGTCG-TCGAGCGG CAC CTGTGCGAGCGACCAG TTTTCCTTCGATGGA TERM 2471 2333059 - 2333085 + g 74 -11.5 -3.66178 | gap 1, overlap 2333058 GCGCCAGCAGTCCTT CGGCGAGGC-CG CTTT CGAGCCACGCCG TTTCCACTTCCGCGC TERM 2472 2333697 - 2333712 + G 81 -11.8 -3.91897 | CCGCCCTCCATGCGC GCGCCG GGCA CGGCGC TTTATCGCTGGACCA TERM 2473 2334054 - 2334039 - g 77 -8.2 -4.27441 | ATCACGATGAAGAAA CCGGCC ATCA AGCCGG AACTGGGCCGTGCGC Bphy_2080 2333631 - 2334614 + | rhodanese domain-containing protein Bphy_2081 2334689 - 2335573 + | glutamate--tRNA ligase TERM 2474 2335611 - 2335589 - T 80 -9.8 -4.15044 | overlap 2335574 2335591 CGCCGCGCCAACAAA GATGGCGCCC GAA AGGCGCCATT CGCAAAAGCAATCAG TERM 2475 2335609 - 2335591 - T 81 -12.4 -3.6761 | overlap 2335574 2335589 CCGCGCCAACAAAGA TGGCGCCC GAA AGGCGCCA TTCGCAAAAGCAATC Bphy_2082 2337094 - 2335646 - | DEAD/DEAH box helicase domain-containing protein TERM 2476 2335817 - 2335797 - G 73 -6.1 -4.44667 | GGCTTGAAGAAGAAA TCGTCGACA GGC TGCTGACGA TGATGCGAGCCATGT TERM 2477 2337157 - 2337113 - R 72 -4.8 -4.56597 | gap 1, opp_overlap 2337118, overlap 2337114 2337148 2337149 GGCTTTCGCTAAAAA TGCGCCTGCGCTCGG-ACCGC TTGC GCGTTGCCAAAGGCGGGCGCG CGGGCGTCCGCTCAA Bphy_2083 2338990 - 2337554 - | aldehyde dehydrogenase TERM 2478 2338422 - 2338459 + g 72 -11.1 -3.53012 | opp_overlap 2338389 TGCGCGAGCACCTCG CCGATGATCAGCGCGCC GACG GGCGTGCGGCTCGCCGG TTTCAGCACGAACGG TERM 2479 2338698 - 2338680 - G 73 -13.8 -2.81312 | opp_overlap 2338678 2338684 2338691 AACGTATCGATCAGA CGCGCGAC CTC GCCGCGCG AATCGTTGATCGGCT Bphy_2084 2340725 - 2339073 - | thiamine pyrophosphate binding domain-containing protein Bphy_2085 2341356 - 2340976 - | hypothetical protein Bphy_2086 2341613 - 2341425 - | hypothetical protein Bphy_2087 2342871 - 2341657 - | phosphoribosylglycinamide formyltransferase 2 TERM 2480 2341825 - 2341788 - G 79 -14.7 -3.01712 | opp_overlap 2341803, overlap 2341768 CGGGCTTGCCGAACA GGCGCAGATCCGCGCCG GGCA CGGCGAGCGCCTGCGCC ACGCCCTCGAACGCG Bphy_2088 2343184 - 2343777 + | protein of unknown function DUF306 Meta and HslJ TERM 2481 2344434 - 2344420 - g 72 -12.8 -3.12895 | overlap 2344418 2344416 CCTTCCACGAAGACA CGCGGC ACG GCCGCG GCTGCGGCCCCCGCC TERM 2482 2345005 - 2344969 - g 73 -12.2 -3.33815 | gap 1 ACGCGCGTCAATCAA CCGGCACAGCCTGCCGC CCCG GCGGCGAGC-GTGCAGG AAACCTTGCGCAGCA TERM 2483 2346603 - 2346588 - g 82 -6.8 -4.67982 | overlap 2346599 2346602 TGTCAGTGAAGAAAA GCTCGC CGAA ACGAGC GCGCTGATCGAGCAG TERM 2484 2347818 - 2347857 + G 71 -13.6 -2.73124 | gap 1, opp_overlap 2347822, overlap 2347814 2347813 2347817 GGATCCCCTCTACGA CGAAGC-CGTCGCGTTCGT GGT GCGAACCCGACGCGCGTCG ATTTCGGCGGTGCAG Bphy_2089 2343889 - 2347998 + | cell division FtsK/SpoIIIE Bphy_2090 2349261 - 2348104 - | 6-phosphogluconolactonase Bphy_2091 2349652 - 2349807 + | hypothetical protein TERM 2485 2349894 - 2349869 - T 73 -12.5 -2.79183 | CGTACCGCGATCACA CCGACCGCTCG GGCG CGAGCGGCCTG ATCGACGACACCTCG Bphy_2092 2350272 - 2350027 - | hypothetical protein TERM 2486 2350395 - 2350379 - H 70 -3.7 -4.7078 | opp_overlap 2350394, overlap 2350380 GTAAGCATCCAAAAA CGGTATT GCC AATACCT CGAACGCTCATGAGC TERM 2487 2350801 - 2350786 - g 82 -6.8 -4.64383 | overlap 2350780 AAGGAGAAACGAAAA CATCCG AAAG CGGACG TACGGTATCGAACGA TERM 2488 2352179 - 2352191 + G 79 -6.2 -4.59853 | overlap 2352163 GAGCGTGCTGCTGAT GCCG CTGCT CGGC TTTTTGCCGCCTTCA Bphy_2093 2350473 - 2352656 + | glycoside hydrolase 15-related TERM 2489 2352859 - 2352811 - f 70 -4.9 -4.55491 | overlap 2352838 2352841 CACGTAACCAGAAAA CGGCCCGCCTCGTCGCTGCGCGT CAA ACACGCTGCCCCTGCGCGAACCG CTAACGCTGGAGCAC Bphy_2094 2352877 - 2354157 + | polyhydroxyalkanoate depolymerase, intracellular TERM 2490 2354267 - 2354250 - T 100 -12.7 -5.17576 | opp_overlap 2354250 GATGAATGCAAAAAA CGGCCTC CTAC GAGGCCG TTTTTCATTGAAGCG TERM 2491 2354250 - 2354267 + T 100 -12.7 -4.8622 | opp_overlap 2354250 GATGAATGCAAAAAA CGGCCTC CTAC GAGGCCG TTTTTCATTGAAGCG Bphy_2095 2354933 - 2354301 - | TetR family transcriptional regulator TERM 2492 2356011 - 2355975 - g 89 -4.9 -5.15969 | overlap 2355976 GCGGAAGCGAAAAAA CGCGCGATCATCCAGGC CGC GCTCGAACGCGCGCGCA AGAAAAAGGAAGACA Bphy_2096 2355312 - 2356187 + | electron transport complex, RnfABCDGE type, B subunit Bphy_2097 2356197 - 2356841 + | endonuclease III TERM 2493 2357026 - 2357040 + G 79 -2.7 -5.00616 | overlap 2357025 GTTCAATCCCAGCCG CGACG AAGTC CGCCG TTTTTTCACCGACAC Bphy_2098 2356916 - 2357443 + | hypothetical protein TERM 2494 2357512 - 2357485 - T 100 -20 -4.07568 | opp_overlap 2357489, overlap 2357489 TCCGTCTCCCGAAAA CAAACACCCCGC ATGT GCGGGGTGTTTG TGTCGATGCATGAGC TERM 2495 2357508 - 2357489 - T 100 -15 -4.64861 | opp_overlap 2357489, overlap 2357485 TCTCCCGAAAACAAA CACCCCGC ATGT GCGGGGTG TTTGTGTCGATGCAT TERM 2496 2357489 - 2357508 + T 100 -15 -4.06678 | opp_overlap 2357489 2357485 TCTCCCGAAAACAAA CACCCCGC ATGT GCGGGGTG TTTGTGTCGATGCAT Bphy_2099 2357935 - 2357552 - | cytochrome c class I TERM 2497 2357896 - 2357868 - G 71 -4.3 -4.46926 | overlap 2357869 GATGCGACGACAAAA CCGGCCAGCGCGA ACG TCGCGCATGCAGC CTTGACCACCGTATG Bphy_2100 2358426 - 2358046 - | cytochrome c class I TERM 2498 2358132 - 2358169 + g 80 -4.7 -4.84359 | gap 1, overlap 2358090 2358133 GGTCGGACAGCGACA CGGCGACCGCATGCATCG TGT CGAAATG-GCGGTCGCCC TTTTTGTAGGCGTGC TERM 2499 2359301 - 2359325 + G 74 -2 -4.75174 | gap 1, opp_overlap 2359289 2359295, overlap 2359303 2359304 2359314 CAACGAGAAGGAACT GC-CCGACGCA TTCC TGCGCCGCTGC TTTTTCCATTACATC Bphy_2101 2358810 - 2359652 + | ATPase TERM 2500 2360562 - 2360531 - g 72 -8.6 -3.9461 | gap 1, overlap 2360528 2360532 CCTGTGGAAGAACAA CCGCCGCCGGCACGT CGA ACG-GCTGGCGACGT GGGACATGCTCCACA Bphy_2102 2359689 - 2360864 + | hypothetical protein Bphy_2103 2360990 - 2362201 + | benzoate transporter Bphy_2104 2362451 - 2363404 + | transaldolase TERM 2501 2363432 - 2363460 + F 100 -16.7 -5.06414 | CATTCGTCGTGTCAA GCGCGCGTGGC CCGCAAA GCCGCGCGCGC TTTTTGTTGGCGCAG Bphy_2105 2363595 - 2364029 + | glyoxalase/bleomycin resistance protein/dioxygenase Bphy_2106 2365241 - 2364045 - | hypothetical protein TERM 2502 2364159 - 2364181 + g 91 -10.5 -4.60949 | opp_overlap 2364159 CTGCGCGAGCCACAA CGGCCCCTG CAGTT CAGGCGCCG TTTCTTTGTCCTGTG TERM 2503 2364881 - 2364930 + g 84 -14.1 -3.65201 | gap 1, overlap 2364882 GCTGCAGGATCAGCG CGAGACCGAGCGCGGCGCCGAGCA GCG TGCCC-GCGGCGCGCTCGGCCGCC TTCTTGCGGATGTTG TERM 2504 2364882 - 2364929 + g 87 -17.6 -2.78639 | gap 1, overlap 2364881 CTGCAGGATCAGCGC GAGACCGAGCGCGGCGCCGAGCA GCG TGCCC-GCGGCGCGCTCGGCCGC CTTCTTGCGGATGTT TERM 2505 2365092 - 2365077 - G 71 -4 -4.57073 | gap 1, overlap 2365079 CAGGCTGTGGAAAAA CT-TCGC GTG GCGATAG CGGTAATACGGGGAC TERM 2506 2365320 - 2365341 + r 93 -17.3 -3.25823 | opp_overlap 2365320 AGCATAAACGAAAAA GCCCGCAGC ATCC GCTGCGGGC TTCGTGTGCGACGGG TERM 2507 2365341 - 2365320 - R 100 -17.3 -5.05505 | opp_overlap 2365320 AGCATAAACGAAAAA GCCCGCAGC ATCC GCTGCGGGC TTCGTGTGCGACGGG Bphy_2107 2366924 - 2365374 - | Na+/solute symporter Bphy_2108 2367145 - 2366921 - | hypothetical protein TERM 2508 2367126 - 2367156 + g 81 -9.6 -4.3295 | overlap 2367128 TTGCTGGCCTTGTTG GCGGCGGCGTCGTG AGC CATGACGTCTCCTC TTTCCTTTTATTGAA TERM 2509 2367128 - 2367154 + g 74 -10.8 -3.7519 | overlap 2367126 GCTGGCCTTGTTGGC GGCGGCGTCGTG AGC CATGACGTCTCC TCTTTCCTTTTATTG Bphy_2109 2368441 - 2367524 - | hypothetical protein TERM 2510 2368451 - 2368467 + r 87 -7.9 -4.72272 | opp_overlap 2368449, overlap 2368453 CGTCATGTAAGGATG TCGCGCC ACA GGCGCAA TTTTTGGTCGAACGA Bphy_2110 2368911 - 2368438 - | hypothetical protein Bphy_2111 2369603 - 2368911 - | chorismate lyase Bphy_2112 2369782 - 2370048 + | hypothetical protein TERM 2511 2370099 - 2370080 - T 100 -13.6 -5.48825 | opp_overlap 2370080 TAGCAGGCAAAAAAA TGCGCTGC CGAA GCAGCGCA TTTTTACCATCCCGG TERM 2512 2370080 - 2370099 + T 100 -13.6 -4.62069 | opp_overlap 2370080 TAGCAGGCAAAAAAA TGCGCTGC CGAA GCAGCGCA TTTTTACCATCCCGG Bphy_2113 2372029 - 2370137 - | heat shock protein Hsp90 TERM 2513 2371658 - 2371687 + g 78 -4.1 -4.77036 | opp_overlap 2371655 2371656 GCCCGAGTAGAAGCC GACGCCGAACTGG CCGA TCAGCGCCGCGTC TTTTTGCTGGTCGCC Bphy_2114 2373622 - 2372153 - | transcriptional regulator TERM 2514 2372314 - 2372297 - G 74 -2.5 -4.72272 | overlap 2372275 CGGTGTCAGCAAAAA GCCTTCC TCAT GGCCGGC CGCCGCGAGCGCATC Bphy_2116 2374714 - 2375619 + | hypothetical protein TERM 2515 2376871 - 2376832 - g 74 -4.8 -4.56597 | gap 1, overlap 2376833 2376836 TGCCGCCCGCAAAAA TCGACGAAGGCGTGGCGCG CCT CGCGCAACTCATCCG-CGC ACGCGTTTGAGACAT Bphy_2117 2375685 - 2376881 + | GntR family transcriptional regulator Bphy_2118 2376993 - 2377457 + | endoribonuclease L-PSP TERM 2516 2377479 - 2377495 + F 78 -10.9 -3.72576 | GCGATCCGCGTGCAA GTGTTCG TCG CGAACAC TTTCGTCGAGCGCGA TERM 2517 2377525 - 2377558 + F 100 -13.9 -4.72986 | opp_overlap 2377514 2377525, overlap 2377513 AATACGACGCCAACA CGCCGTCGATGATGT GAAA GCGTTATCGGCGGCG TTTTTCATGGGCGTG Bphy_2119 2377627 - 2378517 + | PhzF family phenazine biosynthesis protein TERM 2518 2378645 - 2378679 + F 100 -27.4 -3.31461 | opp_overlap 2378645 GCAAGCCGATGACAA CGCGGCCATTCATGCA GAC TGCATGAATGGCCGCG TTGTCAAGATGGCTG TERM 2519 2378679 - 2378645 - f 100 -27.4 -3.42574 | opp_overlap 2378645 GCAAGCCGATGACAA CGCGGCCATTCATGCA GAC TGCATGAATGGCCGCG TTGTCAAGATGGCTG TERM 2520 2379225 - 2379213 - g 71 -4.1 -4.56597 | opp_overlap 2379223, overlap 2379215 2379217 CTCTCGGTTGAAAAA GACAC GAC GTATC GCGAGGCGATGGCCT TERM 2521 2379235 - 2379249 + G 75 -7.1 -4.36914 | opp_overlap 2379217, overlap 2379223 CGTATCGCGAGGCGA TGGCC TCGGC GGCCA TTTTGTCCGCGGCAC TERM 2522 2379693 - 2379677 - g 89 -15.1 -3.79906 | opp_overlap 2379679 CGACTTCTATAACAA CGCGGCC ATC GGCCGCG ACGGCGTGATCGCCG Bphy_2120 2379057 - 2381432 + | diguanylate cyclase/phosphodiesterase TERM 2523 2382426 - 2382388 - g 81 -11 -4.07568 | opp_overlap 2382376, overlap 2382422 TGCCGGTGTTGAAAA CGCTGTTCGTCGCGCC CGCTATC GGTGTGACGAACAACG AGTTCACGCTGGCGT Bphy_2121 2381598 - 2382833 + | chromate transporter TERM 2524 2382870 - 2382887 + T 71 -8.3 -4.05788 | opp_overlap 2382870 GCCGCCAATGTACAA GCGCCGC ATTT GCGGGGC TTTCGTTTGGAACGC Bphy_2122 2383370 - 2382912 - | hypothetical protein TERM 2525 2383102 - 2383082 - G 79 -10.5 -4.11371 | GAATATGCCCGAAAA TCAGCATCA TGA TGATGCCGA TGCCCGCCATCGCGT Bphy_2123 2385877 - 2383556 - | DNA topoisomerase IV, A subunit TERM 2526 2384893 - 2384950 + g 79 -11.1 -3.83502 | gap 1, opp_overlap 2384884 CGAACACGAGACGCA CGGGCGCATCCTTGCCCGACTCGTCGCG TAC CGCGTCGAGCAGGCCGAGCA-GCGTCTG TTTCGTCTGCAACTG Bphy_2124 2387917 - 2385932 - | DNA topoisomerase (ATP-hydrolyzing) TERM 2527 2387118 - 2387136 + g 77 -8.8 -4.3255 | ACGACCCACGCCGCG CCTTCGCC TTC GGCAAAGG TTTCTTCGTTCGAGC TERM 2528 2387885 - 2387903 + g 81 -5.2 -4.87291 | CTTGATCGATGCTTC GCTATACG CGG CGTTTGGC TTTTTCGTTGACATG Bphy_2125 2390152 - 2388227 - | ABC transporter related TERM 2529 2388455 - 2388480 + g 75 -10.3 -3.93288 | overlap 2388474 CGACAGCTTGACCGT GCGCTGCGCGT TGCG ACCCGCCGCGC TTTCCTTCGGTGCGG TERM 2530 2389154 - 2389131 - G 74 -5.2 -4.56775 | gap 1, opp_overlap 2389145 ACCGTCGTCGAAAAA CGGTCGACCAC GGT GCGCTCG-CCG TAGCGCTTCGTCACG TERM 2531 2389630 - 2389652 + g 89 -12.7 -4.18018 | gap 1 CGGGCTGCACGACGA GCGCG-CGCG CCAG CGCGACGCGC TTTTGCATGCCGCCC TERM 2532 2390317 - 2390350 + r 74 -11 -3.59979 | opp_overlap 2390297 CCCGTTCGCGGCGGG CGTGCGCGGCAG CAGCGGATCA CTGCCGCGCAAG TTTCGCGTGCGCGAA Bphy_2126 2390778 - 2390377 - | hypothetical protein TERM 2533 2390958 - 2390937 - H 76 -12.3 -3.47403 | opp_overlap 2390937, overlap 2390944 GGAACTGATAACGAA CCGAAAGGC GTCG GCCTTCCGG CGAATTCCGGTAATA Bphy_2127 2391059 - 2391235 + | rubredoxin-type Fe(Cys)4 protein TERM 2534 2391269 - 2391306 + T 100 -21.4 -4.57837 | gap 1, overlap 2391272 AGCGCTTGCTGTTGT CG-AGCGGTCCGTGGGC CATCT GCCCGCGGACCGCTTCG TTTTTGGCGGCGTGT TERM 2535 2391272 - 2391302 + T 100 -21.9 -3.80855 | overlap 2391269 GCTTGCTGTTGTCGA GCGGTCCGTGGGC CATCT GCCCGCGGACCGC TTCGTTTTTGGCGGC Bphy_2128 2392071 - 2391331 - | methyltransferase type 11 TERM 2536 2391717 - 2391668 - G 81 -14.4 -3.53012 | gap 2, opp_overlap 2391708 TTGCGGCTCTCGAAA GCCA-GCTGCCCGCC-CGTACCCA GCGC TGCGTACGCGGCAGCCAGCGTGGC ATCGAAGCTGGTGTC Bphy_2131 2394524 - 2393721 - | hypothetical protein Bphy_2132 2395490 - 2394894 - | resolvase domain-containing protein Bphy_2133 2396958 - 2395648 - | heat shock protein DnaJ domain-containing protein TERM 2537 2397494 - 2397508 + r 75 -10 -3.70149 | opp_overlap 2397493 2397496 GCACATAGCAGACAG TAGGCG CTA CGCCTA TTTCACTGCTCTCAC Bphy_2134 2399290 - 2397995 - | restriction endonuclease-like protein TERM 2538 2398334 - 2398355 + g 71 -4.3 -4.57569 | AGAGATTTCGCTGTC GGGCGCG TTATATGT CTCGCCC TTTTTCACGACCTGA Bphy_2135 2399394 - 2399747 + | hypothetical protein Bphy_2136 2399825 - 2400406 + | hypothetical protein TERM 2539 2400596 - 2400620 + T 100 -10.8 -5.72622 | gap 1, opp_overlap 2400591 2400596 AATGCCAAATGAAAA CCCGCAACAGC TCGC GCT-TTGCGGG TTTTTTGTTTGTCAC TERM 2540 2400620 - 2400596 - T 90 -10.8 -4.564 | gap 1, opp_overlap 2400596, overlap 2400591 AATGCCAAATGAAAA CCCGCAACAGC TCGC GCT-TTGCGGG TTTTTTGTTTGTCAC Bphy_2137 2400992 - 2400711 - | hypothetical protein Bphy_2138 2401060 - 2401329 + | hypothetical protein Bphy_2139 2401767 - 2402090 + | hypothetical protein TERM 2541 2402109 - 2402151 + F 70 -11.9 -2.75268 | gap 2, overlap 2402108 GACGCGCCTGGCACG GCCG-CGGCGCCCCGCT-CCG CCG CGGCATCGGCGCGCCGACCGC GTTTAACAATCATTG TERM 2542 2402453 - 2402435 - g 82 -3.8 -5.01422 | overlap 2402437 TCACACAAAAAGAAA TCGCCG CGCATGT CGGCAA GGACATCAAGACGGT TERM 2543 2402874 - 2402853 - g 86 -3.5 -5.1356 | overlap 2402855 CGTCAGCAAGAAAAA CGCGCTCGG CCGG CCGCACGGG TTCGAATGCGCGACG Bphy_2140 2402371 - 2403657 + | DNA-cytosine methyltransferase Bphy_2141 2403657 - 2404103 + | DNA mismatch endonuclease Vsr Bphy_2142 2404276 - 2404785 + | PEBP family protein TERM 2544 2406335 - 2406375 + G 77 -15.4 -2.62184 | gap 1, overlap 2406350 CCTGCGTCAGCATGC TGCGCGTCGCGCACAGCGC GCCG GCGG-GCGCGTGACGCGCA TCCTCTGCCCGCGCG Bphy_2143 2404927 - 2406369 + | major facilitator transporter TERM 2545 2406762 - 2406792 + G 72 -11 -3.55444 | overlap 2406756 CGGCGCGGTCGGGGG CGCCGTGATCGGCG TCG CGGTGTTCGCGGCG TTTGCGGCGTCGACA TERM 2546 2406798 - 2406840 + G 73 -14 -2.88861 | GTTCGCGGCGTTTGC GGCGTCGACACCCGTCGTGA TCA TCGCCGCGGGCGTCGGCGCG TATCTGGGCCTGCTC Bphy_2144 2406526 - 2407113 + | hypothetical protein TERM 2547 2407166 - 2407145 - T 100 -13 -4.55798 | opp_overlap 2407165 GATTGGAAACGAAAA CGGCAGCC TCGATG GGCTGCCG CCGGTGACGCCTGTG Bphy_2145 2408622 - 2407201 - | alpha,alpha-trehalose-phosphate synthase (UDP-forming) TERM 2548 2408764 - 2408748 - R 74 -7.2 -4.34345 | opp_overlap 2408750, overlap 2408739 GACAGACGAGCAAAA GCCCGC TGTCC GCGAGC TCGCGCGAAGCAGAT Bphy_2146 2409035 - 2408823 - | hypothetical protein TERM 2549 2409229 - 2409205 - R 76 -13.6 -2.78384 | gap 1 GCGTCGCCGAGCACA GCCGC-CGCTC GAGC GAGCGAGCGGC TCTCAAAGACCGGGG Bphy_2147 2409465 - 2409232 - | hypothetical protein TERM 2550 2409373 - 2409401 + g 74 -11 -3.63627 | gap 2, overlap 2409360 GGGCTGGCCCGGCTG CGCCGGCCCCGGGC CCG GCTCGGG-C-GGCG TTTCGGGTGTGGAAG Bphy_2148 2411118 - 2409607 - | two component, sigma54 specific, Fis family transcriptional regulator TERM 2551 2409972 - 2410000 + g 77 -10.9 -3.7282 | opp_overlap 2409972 2409969 ACGGGTACGACAGCA GCATCTCCCGCAC GGC GGGCGGGAAGTGC TTCTTCGTGCCGTGC TERM 2552 2411211 - 2411228 + r 73 -3.3 -4.8269 | ATTCTTGCTAGCAAA CCGCATC TATT GTTGTGG TTTTTGCTCATTATA TERM 2553 2411318 - 2411269 - R 75 -10 -3.71915 | gap 3, overlap 2411265 TCAAAAAAACATCAA GTCGGCATACGTCGCGGCGCACGAC CGT GCCGC-CGCCGCGA-GC-CGCCGGC TCAGCCACGCGGGAA Bphy_2149 2411570 - 2411319 - | hypothetical protein Bphy_2150 2411969 - 2411652 - | protein of unknown function DUF883 ElaB Bphy_2151 2412035 - 2412319 + | hypothetical protein TERM 2554 2412846 - 2412831 - g 74 -10.4 -3.68886 | opp_overlap 2412832 ACGAAGTCACCGAAA TGGCGC CCGT GCGCCA GGTGAAACTGCTGCG Bphy_2152 2412407 - 2413462 + | sigma-54 dependent trancsriptional regulator Bphy_2153 2413891 - 2414403 + | hypothetical protein Bphy_2154 2414400 - 2414954 + | hypothetical protein TERM 2555 2415005 - 2414988 - T 93 -12.7 -4.40003 | opp_overlap 2414988 CGCGACAAACACAAA GGGGAGC CGCG GCTCCCC TTTTCCATTGCCCGC TERM 2556 2414988 - 2415005 + T 93 -12.7 -4.27316 | opp_overlap 2414988 CGCGACAAACACAAA GGGGAGC CGCG GCTCCCC TTTTCCATTGCCCGC Bphy_2155 2416400 - 2415054 - | ABC transporter related Bphy_2156 2418177 - 2416423 - | binding-protein-dependent transport systems inner membrane component TERM 2557 2417437 - 2417455 + g 89 -2.3 -5.41143 | gap 1 CATTGTCAGGATCAC CCAGC-CG ATTG CGTGCAGG TTTTTTTCGGCGATG Bphy_2157 2418894 - 2420573 + | diguanylate cyclase Bphy_2158 2420722 - 2420988 + | hypothetical protein Bphy_2159 2422428 - 2421088 - | integral membrane sensor signal transduction histidine kinase Bphy_2160 2423125 - 2422400 - | two component transcriptional regulator Bphy_2161 2423349 - 2423897 + | hypothetical protein TERM 2558 2423955 - 2423930 - T 100 -11.1 -5.18726 | opp_overlap 2423930 CCCCGACAAGAAAAA CGCCACGGCAA AGCG CTTCCGTGGCG TTGCTACGTGGCACG Bphy_2162 2424708 - 2424001 - | pirin domain-containing protein TERM 2559 2424036 - 2424049 + g 76 -9.5 -4.09685 | opp_overlap 2424030 CGAACAGCAGCACTT CGGCG CCTT CGCCG TTTTCGACGGTGACG Bphy_2163 2425126 - 2425902 + | cationic amino acid ABC transporter, periplasmic binding protein TERM 2560 2425967 - 2425936 - f 71 -7 -4.15453 | opp_overlap 2425935 2425936, overlap 2425937 CAAGCGATGGCAAAA GCTCGGGCAGGCAC GGAT GGGCCGGCCCGCGA GCTTCGTAATACAGT Bphy_2164 2426230 - 2426919 + | polar amino acid ABC transporter, inner membrane subunit Bphy_2165 2426916 - 2427629 + | polar amino acid ABC transporter, inner membrane subunit Bphy_2166 2427660 - 2428445 + | ABC transporter related TERM 2561 2428475 - 2428492 + F 95 -10.5 -4.77036 | TTATGTAGTTTTACA GGGCGCT TACC GGCGCCC TTTTTCATACTCACG Bphy_2167 2429026 - 2430135 + | OmpC family outer membrane porin TERM 2562 2430202 - 2430229 + T 100 -14.2 -5.95539 | opp_overlap 2430219 CGAGAGGCGCGTATC GGTGCGATGTCC GAAA GGGTATCGCACC TTTTTTTATTTCCGC Bphy_2168 2430703 - 2430365 - | nitrogen regulatory protein P-II Bphy_2169 2432890 - 2430833 - | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase TERM 2563 2432107 - 2432123 + g 100 -13.7 -4.2828 | opp_overlap 2432099 2432097 GAAAACGCTCCGACT CGGCGAG CAT CTCGCCG TTTTCATAGATCAAC TERM 2564 2432777 - 2432738 - G 72 -11.5 -3.54424 | gap 3, opp_overlap 2432728 2432745 GCCGAGTTCGGGAAA CGC-GACGA-GC-GCCGCGC CTT GCGCGGCCGCCTCGTGTGCG AGCCTGAGCGTTTCG TERM 2565 2432996 - 2433034 + H 71 -8 -4.07246 | TCAAGGTCTCGATCA TGTGCGCGCGACGACC CTGCCGC GCACTTCGCGCGCGCA TTTGCTTTAACATGG TERM 2566 2433789 - 2433802 + G 71 -3.7 -4.57569 | opp_overlap 2433783, overlap 2433779 2433790 GCGAGGACATCGGCG ACGCC GACT GGCGC TTTTTCAGCAAGTGC Bphy_2170 2433113 - 2434285 + | hypothetical protein Bphy_2171 2434304 - 2434636 + | excinuclease ABC subunit C Bphy_2172 2434791 - 2435117 + | histone family protein nucleoid-structuring protein H-NS TERM 2567 2435359 - 2435340 - T 100 -13.6 -4.85782 | opp_overlap 2435342 TTGCCCAAAAACAAA GACGCTCC CGAG GGAGCGTC CTGTCAGCCACGAAG Bphy_2173 2435916 - 2435389 - | inorganic diphosphatase TERM 2568 2436434 - 2436383 - g 86 -14.5 -3.53091 | gap 3 ATGGGGCGTCGTAAA CGCCGC--CGAGCGTGGAC-GCCTGC TGT ACCGGCTGTCCATGCTCGTCGCGGCG TGCCACGAAGAACTG TERM 2569 2436520 - 2436489 - g 75 -12.2 -3.55622 | gap 1, opp_overlap 2436483 2436489 2436490 2436494, overlap 2436491 GGCAAGCCGCTCAAA CAGGCGCGCGGCGAC GCC GCCGCC-CTCGCCCG CTATTTCGAGTTCTA TERM 2570 2436512 - 2436491 - g 80 -13.7 -3.35522 | gap 1, opp_overlap 2436489 2436490 2436483 2436494, overlap 2436489 CAAGCCGCTCAAACA GGCGCGCGGC GAC GCCGC-CGCC CTCGCCCGCTATTTC TERM 2571 2437049 - 2437028 - g 81 -11.5 -4.09685 | CGCCATCGTGCAAAA CGCCGGGCA GACC TGCTCGGCG GGCAGCCGCGTGCTG Bphy_2174 2436198 - 2437637 + | aldehyde dehydrogenase Bphy_2175 2437704 - 2438462 + | short-chain dehydrogenase/reductase SDR TERM 2572 2438779 - 2438795 + G 72 -6.5 -4.30844 | opp_overlap 2438774, overlap 2438780 ATACAGAAAGGTCGC CTGGCGT CTA ACGCCAC TTTTGATGCTCAGCT Bphy_2176 2438693 - 2440012 + | major facilitator transporter TERM 2573 2440015 - 2440033 + T 74 -13.8 -2.60962 | overlap 2440014 2440017 AGTGAATCGCTAGGG CGCCTGCG CGG CGCGGGCG GGTTTCTTGTTTCTG TERM 2574 2440017 - 2440035 + T 83 -8 -4.63952 | overlap 2440015 2440014 TGAATCGCTAGGGCG CCTGCGCG GCG CGGGCGGG TTTCTTGTTTCTGGT Bphy_2177 2441317 - 2440127 - | HemY domain-containing protein Bphy_2178 2443380 - 2441320 - | protein of unknown function DUF513 hemX TERM 2575 2442534 - 2442505 - G 80 -14.3 -3.35197 | overlap 2442506 CGCGAGAGACAGCAA CGTGCGGGCAATG CGCT CATCGCCCGCACC GGACACCGTAATGCT TERM 2576 2442533 - 2442506 - G 83 -17.8 -2.60797 | overlap 2442505 GCGAGAGACAGCAAC GTGCGGGCAATG CGCT CATCGCCCGCAC CGGACACCGTAATGC TERM 2577 2443153 - 2443186 + g 80 -16.8 -2.52676 | gap 1, overlap 2443162 CGCGTACTTTTCCAG CGACGCGAGCGCCGC ACGCA GCGGCG-TTGCGTCG TCGGTTGCGGCGATC Bphy_2179 2444363 - 2443380 - | porphobilinogen deaminase TERM 2578 2443949 - 2443924 - G 70 -11.1 -3.30338 | gap 1, opp_overlap 2443889, overlap 2443913 2443925 ACAAGCTCGGGATAA CGCGCGCGCAGC ATC GCTTCGCG-GCG CAGGCTCGACGTGCC TERM 2579 2444029 - 2444019 - G 72 -8.2 -4.03234 | CTGGTTCGAGACAAA CGCG TCG CGCG GATCTTCGCGCTCCA TERM 2580 2444503 - 2444469 - H 74 -13.6 -2.69468 | gap 1, overlap 2444471 2444473 CAGTTCGACAGAGGA GACAGGCCCGC-CGC CGCCAT GCGCGCGAGCCCGTC CGAAAGCCGTATCGA TERM 2581 2445736 - 2445707 - g 89 -15 -3.70773 | GCCGATATTGAAGAA GCGCTCGTCGAG CACGGC CTCGACGCGCGC CTGCCCCCCTTCTTC TERM 2582 2446385 - 2446354 - g 70 -11.6 -3.36492 | gap 1, opp_overlap 2446348, overlap 2446327 2446323 2446376 2446377 CTCCGAAGCGGAGAA GCTGCGCGTGCTGCT GGC AG-AACTCGCGCAGC CGCGCCTGTTGCGCT Bphy_2180 2444729 - 2447821 + | phosphoenolpyruvate carboxylase TERM 2583 2447828 - 2447855 + T 100 -13.4 -4.66609 | overlap 2447829 ACCGGCTGAGTTGGT TTGCGCTGCGGT TCTT GCCGCGGCGCAG TTTTTCGCTGGCATC TERM 2584 2447829 - 2447854 + T 87 -14.7 -3.39483 | overlap 2447828 CCGGCTGAGTTGGTT TGCGCTGCGGT TCTT GCCGCGGCGCA GTTTTTCGCTGGCAT TERM 2585 2447944 - 2447931 - T 72 -9.5 -3.75229 | CAAACCAGAGGCAAA CGCGG ATGC CCGCG AAAAACCCGGCAACG TERM 2586 2447964 - 2447950 - T 79 -7 -4.57073 | overlap 2447952 GATGCCCGCGAAAAA CCCGGC AAC GCCGCG CCGCATGCAAAACGC Bphy_2181 2448734 - 2447982 - | methyltransferase type 11 Bphy_2182 2448905 - 2449717 + | XRE family transcriptional regulator TERM 2587 2449889 - 2449868 - g 88 -2.2 -5.27923 | gap 1, opp_overlap 2449869, overlap 2449869 CAACTGCATAAAAAA GGCGAAGCC TGGTC GGCT-CGCT TCTCCGAGCCGATGT Bphy_2183 2449844 - 2451250 + | argininosuccinate lyase TERM 2588 2451275 - 2451300 + F 100 -15.5 -5.5112 | opp_overlap 2451275 CTGCCGATGCTCAAA GGCGAACTCTC TTGC GAGGGTTCGCC TTTTTTGTTGGTGGC TERM 2589 2451300 - 2451275 - f 83 -13.3 -3.57144 | opp_overlap 2451275 CTGCCGATGCTCAAA GGCGAACTCTC TTGC GAGGGTTCGCC TTTTTTGTTGGTGGC TERM 2590 2452049 - 2452079 + G 80 -5.3 -4.82901 | GCCGCTGCCGTTCGC GTACTCGGTGATG ATCCA CCGCACCGTGTAC TTTTTCTGCGCGGCG TERM 2591 2452291 - 2452262 - g 76 -13.6 -3.08679 | gap 1, opp_overlap 2452261 GGGGTTCATCGAAGA CGCGGC-GCGCGA TCTGC TCGCGCAGCCGCA ATTGAAGAAGGTGGA Bphy_2184 2451414 - 2452334 + | hypothetical protein Bphy_2185 2453169 - 2452456 - | hypothetical protein TERM 2592 2452636 - 2452596 - G 70 -14 -2.62184 | gap 1 GCGCGCGCGACAGCA CCGG-GCGCGCGTGCGAAG GCAG CTTCGCATGCAAGCGCCGG TAGTAGCGGTTCAGA Bphy_2186 2455454 - 2453172 - | lysine decarboxylase TERM 2593 2454002 - 2453979 - G 75 -13.8 -2.93549 | overlap 2453976 GACCTTGAAGAACCA GTCGTCGCCG TATT CGGCGTCGAC CTTGCGCATCGCGCG TERM 2594 2454667 - 2454697 + g 79 -6 -4.64676 | TCCACCAGCACGATG TCGCCCGGCGCG ACCGTCG CGTGCCAGACGA TTTTGTTGGACGTGG TERM 2595 2455205 - 2455227 + g 77 -11.2 -3.79906 | CGACGATCGCGGGCG CGACGTCGGG CGC CTCGCCGTCG TTGTTCTCGACGTAG TERM 2596 2455508 - 2455472 - R 100 -13 -4.58395 | opp_overlap 2455476 2455494 2455503, overlap 2455475 2455476 GCGATTCTCCAAAAA GAACGACCGCTGGGCT GGTTA AGCGCAGCGGTCACCC GGATAGCTGGTGATT TERM 2597 2455505 - 2455475 - R 100 -13.3 -4.40963 | opp_overlap 2455476 2455494 2455503, overlap 2455472 2455476 ATTCTCCAAAAAGAA CGACCGCTGGGCT GGTTA AGCGCAGCGGTCA CCCGGATAGCTGGTG TERM 2598 2455504 - 2455476 - R 86 -14.6 -3.23855 | opp_overlap 2455476 2455494 2455503, overlap 2455475 2455472 TTCTCCAAAAAGAAC GACCGCTGGGCT GGTTA AGCGCAGCGGTC ACCCGGATAGCTGGT Bphy_2187 2456108 - 2455539 - | deoxycytidine triphosphate deaminase Bphy_2188 2457037 - 2456417 - | superoxide dismutase copper/zinc binding Bphy_2189 2458228 - 2457140 - | cobyrinic acid ac-diamide synthase TERM 2599 2458342 - 2458354 + H 74 -7.7 -4.13767 | TGTCTCATTGGCACG CTTGC CGC GCAAG TTTTGCAATAGGGCC Bphy_2190 2458493 - 2459146 + | OmpA/MotB domain-containing protein TERM 2600 2459189 - 2459160 - f 71 -13 -2.62515 | gap 1, opp_overlap 2459155 AATGGTTGGAGACGA CGCGTCTTCGCTG CCAGT CAGCGAAGAC-CG TTCGACAAACATGAT TERM 2601 2459377 - 2459395 + F 100 -13.1 -5.82316 | CTTGTCGTTGTTGCT CCGGGGC CCATA GCCCCGG TTTTTTTTGCCTGCT TERM 2602 2459673 - 2459632 - f 75 -12.1 -3.28712 | overlap 2459609 CGCCGCGTTCGACAA CCCGAGCTGCACGAGCGGA CATT CCCGCCCGTGCGGTCCTGG GCACAGCGCCGTCCG TERM 2603 2460670 - 2460660 - g 83 -2.4 -5.14563 | overlap 2460661 GCGTGGACGAAAAAA GGCG CGA CGAC CGAGCAATATCATTT TERM 2604 2460990 - 2461007 + G 72 -8.3 -3.96148 | opp_overlap 2460988 AAGTATGTGAACATC GCCAGCC GGGC GGCGGGC TTTCTGCTCAAGCGC TERM 2605 2461567 - 2461518 - g 74 -11.4 -3.66178 | GCTGCCAAGGCCAAA GCCAAGGCG-CACGCGAAAGCGAC GGCG GCCGCCCACG-GCGACGCCTCGGC AAAGCCCGACGACAG Bphy_2191 2459745 - 2461925 + | methionyl-tRNA synthetase TERM 2606 2461968 - 2461985 + F 100 -11.3 -5.86061 | opp_overlap 2461968 CCGTCAACCAGGAAA GCACGTC TTCG GACGTGC TTTTTTTTCGTCCGG TERM 2607 2461985 - 2461968 - f 81 -11.3 -3.84246 | opp_overlap 2461968 CCGTCAACCAGGAAA GCACGTC TTCG GACGTGC TTTTTTTTCGTCCGG TERM 2608 2462148 - 2462170 + F 77 -13.4 -2.87132 | opp_overlap 2462147 2462127 2462136, overlap 2462149 TCACGGCGAATGCAT CGGCGGCG CCCCATA CGCCGCCG TGTCTCGCGCGGCGA TERM 2609 2462328 - 2462312 - g 71 -9.4 -3.78775 | CGCGCGATTACGAAA CAGCGC ATGAA GCGCTG GTCGGACTAATCAAT TERM 2610 2464151 - 2464128 - g 71 -12.4 -3.1919 | gap 1, overlap 2464125 2464126 ACAGGCACAAAACCA CGCAGCGCCGC ACC GCGGCGC-ACG AATAAAAGGCTGATC Bphy_2192 2462251 - 2464164 + | putative adhesin processing HmwC-like protein TERM 2611 2464211 - 2464236 + T 100 -8.2 -5.55664 | gap 1, opp_overlap 2464211, overlap 2464218 TGGTCCGCAGATCAA CCGGCGAGGCG CGCGA CGCA-CGCCGG TTTTTTTCGTCGTCC Bphy_2193 2468604 - 2464258 - | hypothetical protein TERM 2612 2466739 - 2466758 + g 79 -7 -4.57837 | overlap 2466754 TTCGATCTTGCGCGA CGCTGGGG CTTT CGCCGGCG TTTTTGCGGCCGTCT TERM 2613 2468483 - 2468510 + g 89 -18.4 -3.02511 | opp_overlap 2468479 2468480 ACCTTCCACAACGGG CGCCGCCGCTTG CGGG CGGGCGGCGGCG TGTTCGGACCGTCCG Bphy_2194 2470396 - 2468621 - | surface antigen (D15) TERM 2614 2470033 - 2470074 + g 79 -6.5 -4.4767 | gap 1, opp_overlap 2470033 2470025 2470036, overlap 2470035 2470036 ATGAAACCGACGAAA TGATGGTGCGCG-GGCCG GGATCGA CGGACACGCGCACCACTG TTTTGTCATCGATGG TERM 2615 2470035 - 2470072 + g 73 -9.1 -3.84585 | gap 1, opp_overlap 2470033 2470025 2470036, overlap 2470033 2470036 GAAACCGACGAAATG ATGGTGCGCG-GGCCG GGATCGA CGGACACGCGCACCAC TGTTTTGTCATCGAT TERM 2616 2470630 - 2470576 - H 83 -14.5 -3.14132 | GCGGCGCGCCATTAA CGG-GATCGCCGCGG-GATCGCCGCGG GATCG CCGCGG-GATCGCCGCGG-GATAGCCG CGGGGAAAGCGGTGC TERM 2617 2470676 - 2470639 - H 74 -11.1 -3.53563 | gap 1 ATAGCCGCGGGGAAA GCGGTGCGCCACGCCGGC CCG GCCGACGGGTTGC-CCGC CTTGGACGCCGCCCG Bphy_2195 2470819 - 2471004 + | hypothetical protein Bphy_2196 2471005 - 2471877 + | chromosome segregation and condensation protein ScpA TERM 2618 2471880 - 2471906 + F 73 -13 -2.75535 | gap 1, overlap 2471874 CCTGCCCGCCTGACA GGCTGCCGGCC CGCTCC GGCCGGC-GCC TCGTTCCAGTATTCG TERM 2619 2472073 - 2472054 - f 72 -8.5 -3.81951 | overlap 2472055 GCGGATATCACGAAA CCGCGCG CTGCGT CGCGCGA CCGAGACAACCACGA Bphy_2197 2472125 - 2472958 + | pantoate--beta-alanine ligase Bphy_2198 2472977 - 2473363 + | aspartate 1-decarboxylase TERM 2620 2473398 - 2473430 + T 100 -11.4 -5.27335 | gap 2 GCCGCAGTTGCACAC GGGCTGACGATGCGCG AGC CGCGCGT--TCAGCCC TTTTTATTTGCGCCC Bphy_2199 2474128 - 2473424 - | cobyrinic acid ac-diamide synthase Bphy_2200 2474352 - 2474771 + | thioesterase superfamily protein TERM 2621 2475104 - 2475119 + G 75 -6.8 -4.38154 | overlap 2475083 2475081 GCCGCGCAATCTCAT TGCGTG ACGA CGCGCA TTTTCTCGCCAATCT TERM 2622 2475931 - 2475920 - g 70 -5.8 -4.25848 | AACCGCTGATGAAAA CGCT GGAT AGCG TCGACGAGGTCAAGA Bphy_2201 2474905 - 2476575 + | TPR repeat-containing protein Bphy_2202 2477090 - 2476656 - | DoxX family protein Bphy_2203 2478668 - 2477214 - | cobyric acid synthase CobQ Bphy_2204 2478824 - 2479372 + | adenosylcobinamide-phosphate guanylyltransferase TERM 2623 2479512 - 2479570 + G 86 -15.9 -3.28791 | gap 2, opp_overlap 2479498 2479511 AGTCGCGCTGAACAC CGGGCGGCGCGGCCGGCTGCTGGGCATCG TCG CG-TGGCTGCTCGCCG-TCGCGCCGCCCG TTCTGGCCGCGACCT TERM 2624 2479793 - 2479778 - g 80 -11.8 -3.73775 | opp_overlap 2479788 CGCACGCCGACGAAA GCGCGC TGTC GCGCGC CGCCGTCGAGTCGGC Bphy_2205 2479369 - 2480310 + | cobalamin biosynthesis protein CobD TERM 2625 2481060 - 2481100 + G 71 -11.9 -3.28924 | gap 3, opp_overlap 2481083 2481084 ATGGCAAGCGGCCAT GCGCGCGC-AGCTCGCGAGC GAAA GCGCGCG-GCTCGC-CGCGC TTCTGAGCGCCCATC TERM 2626 2481164 - 2481213 + G 79 -7 -4.58395 | gap 1, opp_overlap 2481203 GGATCGCCGACGCGC GCGCCGTGCGAGTGCATCGCGCG CTCGC CGCGCAAGGCATCTGGAC-GCGC TTTTTCGCCCGTCCC Bphy_2206 2480314 - 2481315 + | L-threonine-O-3-phosphate decarboxylase Bphy_2207 2481321 - 2482232 + | periplasmic binding protein Bphy_2208 2482827 - 2482237 - | alpha-ribazole phosphatase Bphy_2209 2483561 - 2482812 - | cobalamin-5-phosphate synthase CobS Bphy_2210 2484699 - 2483617 - | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase Bphy_2211 2485515 - 2484706 - | ABC transporter related Bphy_2212 2486561 - 2485512 - | transport system permease protein TERM 2627 2486328 - 2486280 - G 80 -14.3 -3.37499 | overlap 2486241 CAATACCTGAAGCAA CGCGCCCGCGAGCGCGAGCAGCG CCC CGCAGCCGAAGCCCGCGAGCGAG CGCGGCAGGCGCAGC Bphy_2213 2488537 - 2486672 - | TonB-dependent receptor plug TERM 2628 2486830 - 2486863 + g 80 -15.3 -3.14463 | opp_overlap 2486822 2486830 2486829 2486832 CGAACGACGCGAAAT GACGCGCGCGCCGGT TGAG ATCGGTGTGCGTGTC TTCGTCGACGGGATT TERM 2629 2488899 - 2488882 - H 74 -7.7 -4.15222 | overlap 2488883 AGGCGCGTCAAGAAA CGCGGAT CCTC ATCCGCA TCGCGCCTGCCCCTT Bphy_2214 2489087 - 2489449 + | hypothetical protein Bphy_2215 2489446 - 2489760 + | hypothetical protein TERM 2630 2490035 - 2490011 - g 86 -15.7 -3.2794 | opp_overlap 2490011 GGGGACCCATACGAA CGGCATCGGAC CAA GTCCGGTGCCG TTTTTTTTCGTTCAC TERM 2631 2490011 - 2490035 + G 100 -17.9 -5.95166 | opp_overlap 2490011 GGGGACCCATACGAA CGGCATCGGAC CAA GTCCGGTGCCG TTTTTTTTCGTTCAC Bphy_2216 2489904 - 2490083 + | hypothetical protein Bphy_2217 2490152 - 2490622 + | hypothetical protein Bphy_2218 2490816 - 2491538 + | hypothetical protein TERM 2632 2491664 - 2491631 - T 78 -3.7 -4.96848 | gap 1, opp_overlap 2491652, overlap 2491632 GCTCGCAGACAAAAA CCTCAGCTAACCCCGG CCG CCTGGGCC-GCCGAGC GCCCATTCCTCCGAT Bphy_2219 2492538 - 2491633 - | prolipoprotein diacylglyceryl transferase TERM 2633 2491790 - 2491772 - G 82 -6.6 -4.66318 | AGCAGCCCAAGAAAA TCGTCCGG CTC CCGAGCGA ACTCAACGGTAAACC Bphy_2220 2493562 - 2492609 - | LysR family transcriptional regulator TERM 2634 2494338 - 2494310 - g 77 -12.4 -3.65991 | gap 1 AGGGGTCGAACAGAA CGCCTGCCCGAGC ACGG GCTCGTGC-GGCG GCATGTACACGGCCA Bphy_2221 2493750 - 2495423 + | dihydroxy-acid dehydratase TERM 2635 2495494 - 2495527 + F 100 -21.9 -2.56747 | opp_overlap 2495498, overlap 2495498 GCATGCGTCGATGGA TAAAGGGGCACACGG ATCG CCGTGTGCCCCTTTG CTCTTATAATGCGTC TERM 2636 2495523 - 2495498 - f 100 -20.5 -3.91897 | opp_overlap 2495494 2495498 GCGTCGATGGATAAA GGGGCACACGG ATCG CCGTGTGCCCC TTTGCTCTTATAATG TERM 2637 2495498 - 2495523 + F 100 -20.5 -3.98159 | opp_overlap 2495498, overlap 2495494 GCGTCGATGGATAAA GGGGCACACGG ATCG CCGTGTGCCCC TTTGCTCTTATAATG Bphy_2222 2495580 - 2495906 + | cytochrome c class I Bphy_2223 2496688 - 2495918 - | hypothetical protein TERM 2638 2496587 - 2496599 + g 75 -6.9 -4.35044 | CTCATGCGAGCCGCT GCGCT TGG GGCGC TTTGTCTTTGCGTGC Bphy_2224 2497198 - 2496782 - | DNA polymerase III chi subunit HolC Bphy_2225 2498756 - 2497245 - | leucyl aminopeptidase TERM 2639 2498466 - 2498435 - G 71 -12.2 -3.28712 | gap 1, opp_overlap 2498430, overlap 2498436 CCTTGGTCCCGAGAA TGGCG-CGCCACGCG GCG CGCACGGCGTCGCCG TAGACCTTCTGTGTG TERM 2640 2498465 - 2498436 - G 77 -15.7 -2.57132 | gap 1, opp_overlap 2498430, overlap 2498435 CTTGGTCCCGAGAAT GGCG-CGCCACGCG GCG CGCACGGCGTCGCC GTAGACCTTCTGTGT TERM 2641 2498718 - 2498738 + g 71 -3.9 -4.46926 | GAACCCGTTGGTCGA GCCTTTGCT CCA ATCACAGGC TTTTATGCTAAAGTC TERM 2642 2499525 - 2499490 - g 88 -14 -3.86995 | gap 1, opp_overlap 2499489, overlap 2499517 GGAAACGCACAAGAA CGGCGACCG-CTTCGTG GTG CTCGAAAACGGCCGCCG CTATGACGGCGAGCC TERM 2643 2499541 - 2499517 - g 81 -11.4 -4.07568 | gap 1, overlap 2499490 CGTGGTGCTCGAAAA CGGC-CGCCGC TATG ACGGCGAGCCG GGCCATCCCGACTTC Bphy_2226 2498894 - 2500006 + | permease YjgP/YjgQ family protein TERM 2644 2500162 - 2500189 + G 73 -12 -3.30619 | gap 1 CCAGTACGCGGTGCT GCGCGTC-GCGTT GCA AACGCCGTCGCGC TTCTACGAAATCATT Bphy_2227 2500010 - 2501158 + | permease YjgP/YjgQ family protein TERM 2645 2501149 - 2501162 + F 70 -3.7 -4.61482 | overlap 2501119 GCTGAAGTGGGTCGA CCGGC ACTA GCCTG TTCTTTTTTGCGGGG Bphy_2228 2501185 - 2501565 + | cobalamin (vitamin B12) biosynthesis CbiX protein TERM 2646 2501545 - 2501559 + T 71 -10 -3.61609 | overlap 2501547 2501554 GCGATCGCGGGTTAT TGCCTG CGG CAGGCA TTCTGATTTCGCTGC Bphy_2229 2502508 - 2501663 - | Beta-lactamase TERM 2647 2501690 - 2501724 + g 73 -9.9 -3.91084 | gap 1, opp_overlap 2501683, overlap 2501687 GTCGAATACGATTCG CGCCGCCTCGTCGACG ATTG CGTCC-TGTGGCGGCG TTTCCTTCGGCGTCA TERM 2648 2502673 - 2502642 - R 100 -16.6 -3.86653 | overlap 2502643 ATCGAGTAAAGACAA TCGGCCGCATTCAC TCGC GCGAATGCGGCCGG TCAAAGAGACAATGC TERM 2649 2502672 - 2502643 - R 100 -20.1 -2.91269 | overlap 2502642 TCGAGTAAAGACAAT CGGCCGCATTCAC TCGC GCGAATGCGGCCG GTCAAAGAGACAATG Bphy_2230 2503461 - 2502694 - | uroporphyrin-III C-methyltransferase Bphy_2231 2504825 - 2503497 - | sulfate adenylyltransferase, large subunit Bphy_2232 2505813 - 2504851 - | Sulfate adenylyltransferase TERM 2650 2505316 - 2505337 + g 72 -3.5 -4.71426 | opp_overlap 2505316 2505319, overlap 2505311 2505319 GTCGCGGAACGAAAA GATGCGCTC TTTC GCGCGCGCC TTTTCTTCGTCGCGG Bphy_2233 2506659 - 2505919 - | adenylylsulfate reductase, thioredoxin dependent Bphy_2234 2507201 - 2506656 - | hypothetical protein Bphy_2235 2508899 - 2507220 - | sulfite reductase (ferredoxin) Bphy_2236 2509137 - 2510078 + | LysR family transcriptional regulator TERM 2651 2510233 - 2510255 + G 71 -13.4 -3.01712 | CTTGCGCCGCTTCAC GCGCGCCG CCGCGAT CGGCGCGC TGTTCGGCGCCGCCG Bphy_2237 2510180 - 2511367 + | branched chain amino acid ABC transporter periplasmic ligand-binding protein Bphy_2238 2512804 - 2511416 - | hypothetical protein TERM 2652 2512849 - 2512834 - H 71 -10.4 -3.50447 | CGAAGTTCTACACAA CGCTGC TGGC GCAGCG CGACATGATGGGAGG TERM 2653 2513142 - 2513099 - g 100 -21.9 -2.87344 | gap 1, opp_overlap 2513097 2513095 TATCTCGTCGACAGA TCGAGCGGC-GCGGACCAGA AGGTG TCCGATCCGCTGCCGCTCGA CGCGTTCGTCAAATT Bphy_2239 2512988 - 2513245 + | hypothetical protein Bphy_2240 2514406 - 2513261 - | oxidoreductase domain-containing protein Bphy_2241 2515530 - 2514481 - | xylose isomerase domain-containing protein TERM 2654 2515606 - 2515569 - R 90 -16.3 -3.54424 | gap 1, overlap 2515570 GGCTACGTCGGGAAA GCGCCGCGCTTCGCG-CG TGT CGACGCGAAGCGCAACGA GCGCGATCAGAACGG TERM 2655 2515605 - 2515570 - R 100 -19.8 -2.72511 | gap 1, overlap 2515569 GCTACGTCGGGAAAG CGCCGCGCTTCGCG-CG TGT CGACGCGAAGCGCAACG AGCGCGATCAGAACG Bphy_2242 2516578 - 2515613 - | ABC sugar transporter, periplasmic ligand binding protein TERM 2656 2516453 - 2516488 + g 78 -3.8 -4.72272 | GCCGCCTGTGAAACC GTGATCGGCGGTGGGG ATGG CGACGCCGACGGTTAC TTTTTCGTCGGCGCG Bphy_2243 2517790 - 2516777 - | monosaccharide-transporting ATPase Bphy_2244 2519258 - 2517771 - | ABC transporter related Bphy_2245 2520287 - 2519271 - | LacI family transcription regulator TERM 2657 2519397 - 2519359 - G 89 -18.8 -2.9155 | opp_overlap 2519380, overlap 2519354 CGCTGCAACAGCAGA CGCGCAGCCGTTTCGCCA AGC TCGCGCATCGGCTGCGCG ATCGTCGTGAGCGGC Bphy_2246 2520626 - 2521279 + | protein-L-isoaspartate(D-aspartate) O-methyltransferase TERM 2658 2521425 - 2521411 - g 79 -11.4 -3.84451 | CGTGGGAAATCGAAA CGGCGA AGA TCGCCG GCAGCGTGTCGATTC Bphy_2247 2521311 - 2521634 + | rhodanese domain-containing protein TERM 2659 2521658 - 2521692 + F 78 -6.2 -4.7173 | overlap 2521665 GCGTTTCCTCGCTTC ATGTCGGGCGCCGGCT TCA GGCCGGCGCTTTTCAA TTTTTACGTCTGGTG TERM 2660 2521665 - 2521685 + F 100 -16.1 -4.4874 | overlap 2521658 CTCGCTTCATGTCGG GCGCCGGCT TCA GGCCGGCGC TTTTCAATTTTTACG TERM 2661 2521949 - 2521989 + G 76 -13.8 -3.14881 | TCGGCGGGCGTTCCG GCCGCGTCCGCCAGCTCG CGGGC CGCGCTGACGGCGGCGGC TTCCTCCGCGCCTTA TERM 2662 2522048 - 2522019 - g 84 -12.9 -3.77464 | gap 1 ACACCATTCACGAAA CGCGAACCGCCGAC GGC GTCA-CGGTCCGCG AATATGAATCGGCGG Bphy_2248 2521850 - 2522305 + | hypothetical protein Bphy_2249 2522302 - 2523792 + | hypothetical protein TERM 2663 2523827 - 2523855 + T 100 -12.5 -4.88407 | gap 1, opp_overlap 2523827 TGCGCCAGCAACCAA CGGCGGATCGGC GTGCAA GCC-ATCCGCCG TTTTTCATTGCATAC TERM 2664 2523855 - 2523827 - T 79 -12.5 -3.39895 | gap 1, opp_overlap 2523827 TGCGCCAGCAACCAA CGGCGGATCGGC GTGCAA GCC-ATCCGCCG TTTTTCATTGCATAC Bphy_2250 2524103 - 2523804 - | hypothetical protein TERM 2665 2523917 - 2523890 - G 71 -12.6 -3.21276 | opp_overlap 2523898 2523899, overlap 2523888 2523891 CGCCCGTGCACAACA GCGCAGCGGCGA TGCA CCGGCGCCGCGC CCGCGACGCCGACGC TERM 2666 2523898 - 2523937 + g 74 -11.2 -3.5594 | opp_overlap 2523890 2523891 2523888, overlap 2523899 CACAACAGCGCAGCG GCGATGCACCGGCGCCGC GCCC GCGACGCCGACGCGTCGG TTTGCACGCTCCGTT TERM 2667 2523899 - 2523936 + g 75 -14.7 -2.73243 | opp_overlap 2523890 2523891 2523888, overlap 2523898 ACAACAGCGCAGCGG CGATGCACCGGCGCCGC GCCC GCGACGCCGACGCGTCG GTTTGCACGCTCCGT Bphy_2251 2524214 - 2525515 + | urea ABC transporter, urea binding protein TERM 2668 2525587 - 2525558 - f 80 -14.3 -2.75382 | opp_overlap 2525566 2525572, overlap 2525555 GAGGTCATGCAACGA GCGGTGCGCCA TGTGCGGG CGGCGCACCGC GCCGGCCTGCTGGTC TERM 2669 2525572 - 2525597 + F 80 -14.7 -2.74523 | gap 1, opp_overlap 2525558 2525555, overlap 2525566 AGCGGTGCGCCATGT GCGGG-CGGCGC ACC GCGCCGGCCTGC TGGTCTTGCCGATCC TERM 2670 2526010 - 2525983 - g 72 -11.2 -3.53012 | CTGTTGCGCTCGAAA GTTGCGGGCGCG CTGT CGGGCCTGCAAC TCGACTCGCCCGATT TERM 2671 2526807 - 2526819 + G 81 -9.1 -4.21908 | GCCGTACAACCGGCT CGCGA TTC TCGCG TTTTCGCTGATCGTC Bphy_2252 2525629 - 2527260 + | urea ABC transporter, permease protein UrtB TERM 2672 2527364 - 2527405 + G 72 -11.5 -3.45324 | gap 1, overlap 2527363 2527365 GGTTTCGCGCTCGGC CTGCCGCCGCGCCCCGCG CTGCTGT CGCGGCGCGCG-TGGCAA TGTTTGATCGCACTG TERM 2673 2527365 - 2527404 + G 75 -15 -2.66873 | gap 1, overlap 2527364 2527363 GTTTCGCGCTCGGCC TGCCGCCGCGCCCCGCG CTGCTGT CGCGGCGCGCG-TGGCA ATGTTTGATCGCACT Bphy_2253 2527262 - 2528458 + | urea ABC transporter, permease protein UrtC Bphy_2254 2528455 - 2529318 + | urea ABC transporter, ATP-binding protein UrtD Bphy_2255 2529387 - 2530079 + | urea ABC transporter, ATP-binding protein UrtE Bphy_2256 2530116 - 2530997 + | urease accessory protein UreD TERM 2674 2531492 - 2531548 + G 70 -6 -4.26344 | gap 3, opp_overlap 2531485 2531491 2531492 2531539 CTGCAAACCAACAAG GTCGATCTCGTGATCTCGTCGCTCGGC AAGACA GCAGAGCG-CGAGA--AGGTGATCGAC TTTTCGTCCGCCTAT TERM 2675 2531740 - 2531725 - g 72 -8.2 -3.9644 | opp_overlap 2531725, overlap 2531719 CTTCGAAGACAACAA CGCGAC CATC GCCGCG TTCCTGTCGGGCCAG Bphy_2257 2531192 - 2531992 + | extracellular solute-binding protein Bphy_2258 2532111 - 2532413 + | urease, gamma subunit Bphy_2259 2532424 - 2532729 + | urease, beta subunit TERM 2676 2533665 - 2533643 - g 72 -12.7 -3.14647 | gap 1 ACGTATCATACGGAA GGCGCG-GGC GGCG GCCACGCGCC CGACATCATCAAGGT TERM 2677 2533987 - 2533966 - g 73 -12.3 -3.41745 | gap 1, overlap 2533967 TGCGCACAAGATGAA GGTGCAGCGC GGC GCGCTGC-CC GAGGACAGCACGCGC Bphy_2260 2532818 - 2534524 + | urease, alpha subunit Bphy_2261 2534526 - 2535212 + | UreE urease accessory domain-containing protein Bphy_2262 2535199 - 2535879 + | urease accessory protein UreF TERM 2678 2536443 - 2536461 + G 71 -8 -4.18401 | CGTCCGATGCTGCCA GGATGCGC GGC GCGCGGCC TTTTGCGATGTGTAA Bphy_2263 2535905 - 2536546 + | urease accessory protein UreG TERM 2679 2536560 - 2536573 + T 91 -8.1 -5.08824 | overlap 2536555 GAGGTTTTTTGTCTG CGACG CGGT CGTCG TTTTTTGCCTGCAGC Bphy_2264 2537920 - 2536613 - | 3-deoxy-D-manno-octulosonic-acid transferase domain-containing protein TERM 2680 2537595 - 2537565 - G 78 -7.4 -4.3739 | overlap 2537566 CATGCCTTCAGAAAA CGCCGCACGGCGCG GGG CATGTCGTACGGCA GATAGCAGCGCAACA TERM 2681 2537959 - 2537994 + r 81 -15.4 -2.52464 | gap 1, opp_overlap 2537947 2537960 GAAGCGCACGATGAC ACGCGACGACGCCGCAG CTG CCGCGGCGTC-TCGCGA TGCATTGGACGGAAC TERM 2682 2537993 - 2537960 - R 100 -21.1 -2.83012 | gap 1, opp_overlap 2537959, overlap 2537947 AAGCGCACGATGACA CGCGACGACGCCGCAG CTG CCGCGGCGTC-TCGCG ATGCATTGGACGGAA Bphy_2265 2538908 - 2538024 - | hypothetical protein TERM 2683 2538387 - 2538422 + g 70 -13.8 -2.63348 | opp_overlap 2538363, overlap 2538386 CATGTCCTCGAACGG CTCGCCGACGCGCCAC ACGC GCGGCGCGCCAGCGGG ATTGATGTTCGTGAA TERM 2684 2538694 - 2538641 - G 75 -14.5 -2.74019 | gap 1, opp_overlap 2538680 2538686, overlap 2538631 GATAACGCGCAATCA GCGCGC-GCACGGCCGACTGCGTGAT GGC ATCGCCCAGCACGCCATGCAGCGCGC CGCCGTTCGGCGCGA TERM 2685 2538990 - 2538933 - R 80 -10 -3.95219 | gap 3, overlap 2538924 TTCAAAGCGGATAAA GCCG-CGTCACAGCAGGCCGAAG-CCG GTCAGCG CGGACTTCA-CCTGCTGCAGCGTCGGC GGCTGGCCCGCCGTG Bphy_2266 2540081 - 2538939 - | lipopolysaccharide heptosyltransferase I TERM 2686 2540006 - 2540036 + g 81 -4.7 -4.87665 | overlap 2540013 TTTTAGCGCGGTCCT TCGC-ACGCGCGCGG ATT CCG-GCGTTTCGCGA TTTTTCTGGCTGCAC TERM 2687 2540478 - 2540454 - R 100 -11.5 -5.52384 | overlap 2540473 CCGCGAGCAAAAAAA CGACGCCTT GAGGTGA AAGGCGTCG CACACAGCTTGAAAA Bphy_2267 2541902 - 2540508 - | phosphomannomutase TERM 2688 2542972 - 2542997 + G 91 -17.7 -3.26319 | TCACGCTGGCGCTGA TGCTGGCGCAA ACGC TTGCGCCAGCA TTCGTCTACCGCGTT Bphy_2268 2542149 - 2543411 + | polysaccharide biosynthesis protein TERM 2689 2543709 - 2543666 - g 80 -14.5 -3.05596 | gap 1, opp_overlap 2543668 2543670 CAGGCGGGCATCGAA GCGCTCGCGGCGCGCGGCTT TCGCT ACGCCGCGCGCATCGA-CGC CGGCGACCTGACTGT Bphy_2269 2543408 - 2544244 + | glycosyl transferase family protein Bphy_2270 2544275 - 2545447 + | glycosyl transferase group 1 Bphy_2271 2545459 - 2546481 + | UDP-glucose 4-epimerase TERM 2690 2546567 - 2546588 + F 73 -2.9 -4.87133 | gap 1, overlap 2546565 2546569 2546587 CCGATCCGGCGATTG CA-GCGCGAG TGC CGTGCGCATG TTTTGTTTCACGCGT Bphy_2272 2546941 - 2548263 + | FAD linked oxidase domain-containing protein Bphy_2273 2548260 - 2549000 + | short-chain dehydrogenase/reductase SDR Bphy_2274 2548997 - 2549410 + | hypothetical protein Bphy_2275 2549643 - 2551064 + | UbiA prenyltransferase Bphy_2276 2551180 - 2552229 + | hypothetical protein TERM 2691 2553437 - 2553465 + G 93 -5.1 -5.4505 | overlap 2553438 GCTGACGCTCATCGC GCTGCATGGCGCG AGC CGCTTCACGCAGA TTTTTTCTTCGGCCA Bphy_2277 2552370 - 2553599 + | hypothetical protein Bphy_2278 2554050 - 2554253 + | PST family polysaccharide export protein Bphy_2279 2554906 - 2555163 + | hypothetical protein Bphy_2280 2555175 - 2555543 + | hypothetical protein Bphy_2281 2555723 - 2556778 + | acyltransferase 3 Bphy_2282 2557929 - 2556868 - | hypothetical protein TERM 2692 2558852 - 2558802 - g 72 -8.9 -4.00042 | gap 2 CTGCCCACGAAAGAA CGGC-TCGACCGCTGCACGA-GCGA TTC CCGCGTCGTGCTGGAGCCGGCGCCG CGCAATACCGCCCCC Bphy_2283 2558502 - 2560043 + | mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase TERM 2693 2561042 - 2561016 - f 90 -10.1 -4.56597 | gap 1 GCGCGTGCCGAAAAA CAGCCGTGTGGC GCAC GCCCC-CGGCTG CAGGAGACTCGTTAC Bphy_2284 2561118 - 2562122 + | glycosyl transferase family protein TERM 2694 2562526 - 2562538 + F 81 -3.3 -5.2189 | opp_overlap 2562522, overlap 2562519 ATGGTCCACAATCGG CTTCC GAA GGATG TTTTTTCCTGCTTCA Bphy_2285 2562602 - 2562886 + | hypothetical protein TERM 2695 2562909 - 2562889 - f 79 -13.9 -3.08679 | GCCCCCGACCTAACA CTGGGCGCG CAT CGCGCCCCG ATGGACTTAGGAGCC Bphy_2286 2563496 - 2564068 + | hypothetical protein Bphy_2287 2566084 - 2564495 - | methyl-accepting chemotaxis sensory transducer TERM 2696 2566375 - 2566402 + G 70 -14.1 -2.64416 | opp_overlap 2566365 2566364, overlap 2566374 GAAATTCCATGCGCG GCCCGTGCCGC GCATCG GCGGGACGGGC ATTCTGATCGGACTG Bphy_2288 2566250 - 2567350 + | glycosyl transferase family protein TERM 2697 2567494 - 2567507 + T 100 -9.5 -4.88407 | opp_overlap 2567494 ACAGACATGAAAAAA GGCGC CTCG GCGCC TTTTTCGTTACATCA TERM 2698 2567507 - 2567494 - T 100 -9.5 -5.25893 | opp_overlap 2567494 ACAGACATGAAAAAA GGCGC CTCG GCGCC TTTTTCGTTACATCA TERM 2699 2567533 - 2567581 + T 73 -12.5 -2.75992 | opp_overlap 2567524, overlap 2567531 2567539 CATCAATGCCCGCTT GCC--CGCTGGCGGCGGCACGCTGC GCA GCGGCG-GC-GCGGCCAGCGTCGGC TGATATTCGGTAACC Bphy_2289 2569404 - 2567515 - | polysaccharide biosynthesis protein CapD TERM 2700 2567617 - 2567599 - G 70 -13.8 -2.53015 | opp_overlap 2567598 2567597 ATATTCGGTAACCCA GCGCCGCA GAT CGCGGCGC ACTTCGTCGTCCGTC Bphy_2290 2570438 - 2569410 - | glycosyl transferase family protein TERM 2701 2569845 - 2569835 - G 84 -6.8 -4.82901 | CGTCGCCGAGAAAAA TCCG CGC CGGA TGAAAATTGAAGAAC TERM 2702 2570056 - 2570040 - G 75 -2.9 -4.79223 | CCAGATCATCAAAAA TGCCAGC ACG ACCAGCA CCCACCACGGCGCCG Bphy_2291 2571402 - 2570446 - | NAD-dependent epimerase/dehydratase TERM 2703 2570560 - 2570503 - G 74 -13 -3.28712 | TTCGTCGGTTGAGAA CGGCGGT-TGCCAGC-CGAGGACGTCGC GTATGT GCGACGTA-TCGAGCTG-CAGACCGCCG ATCAGACGGTCAACT TERM 2704 2570763 - 2570719 - G 74 -11.4 -3.59979 | GTCCGCGACGTGAAA GCACTGGTGCGCCGCGCG CGGATCGGT CGCGCAACACATCAGCGC GTCCGCCAGGTTGCC TERM 2705 2571121 - 2571071 - G 84 -12.6 -3.95022 | gap 3, opp_overlap 2571068 2571113, overlap 2571064 CTGACGAACACGAAA CG-CGGCACGCCG-TGCTC-CCGTG CGGC CGCGGCGAGCCGCAGCGTGCCGTCG ACATTGGTGGCACGG Bphy_2292 2572244 - 2571399 - | glycosyl transferase family protein TERM 2706 2572330 - 2572341 + H 72 -5.8 -4.42851 | overlap 2572322 GGAAAATGCGAGGAT TCGG CAAC CCGA TTTTCGCTTTGTTAC TERM 2707 2572492 - 2572524 + H 88 -11.1 -4.1711 | TGCCCTCGCCCACGC GCGAGAGCGACGCCG GGC CGGCGTTTCCCACGC TTTATTCAGCGTGAT TERM 2708 2573601 - 2573585 - g 83 -2.2 -5.12068 | overlap 2573586 GATAGCCAACAAAAA GGACGT CCAGC ACGTCA AGAAAATTGTCGAAA Bphy_2293 2572569 - 2574002 + | mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase TERM 2709 2574267 - 2574255 - g 71 -9.1 -3.74693 | opp_overlap 2574255 CTTTATCTGACGAAA GGCCA TTT TGGCC TTTTCTACGGCCGCG TERM 2710 2574255 - 2574267 + G 83 -9.1 -4.36914 | opp_overlap 2574255 CTTTATCTGACGAAA GGCCA TTT TGGCC TTTTCTACGGCCGCG Bphy_2294 2574150 - 2574608 + | GtrA family protein Bphy_2295 2574924 - 2576054 + | glycosyl transferase family protein Bphy_2296 2576110 - 2578008 + | glycosyl transferase family protein Bphy_2297 2578005 - 2578937 + | NAD-dependent epimerase/dehydratase TERM 2711 2579052 - 2579024 - f 71 -11.8 -2.87683 | gap 2, opp_overlap 2579028 AGACCCGGTGAGACA GGCAT-CCGG-CCG CTC CGGACCGGCATGCC TTGCCGCGACCCGGA TERM 2712 2579161 - 2579183 + F 74 -2 -4.94243 | gap 1, overlap 2579159 2579162 AATCTGGCGTATTCG GCGGACGGA CGCTGT TCCGTT-GC TTTTGCTTTTTTTGC TERM 2713 2579996 - 2580017 + G 73 -5.8 -4.3487 | GCCGCGCTCGATCCG GCAGGCGT ATTGCC AAGCCTGC TTTTCCCTTATGTGT TERM 2714 2580690 - 2580676 - g 75 -3.5 -4.82901 | CTTCCTGCAGAAAAA CGTCG GACTG CAACG CATCTATTCGCTTGG Bphy_2298 2579180 - 2581789 + | hypothetical protein TERM 2715 2581957 - 2581923 - g 81 -12.1 -3.84406 | TGTCTACGACAACAA CTCGCGCGACAACAC GTCAA GCGTTGCCGCGCAGG CGGGCGCCGTCGTGC TERM 2716 2582473 - 2582487 + G 70 -2.1 -4.63184 | opp_overlap 2582420 AAGCTGATCCGTCAC GAACG GCCAA TGTTC TTTTTCACGTGCATT Bphy_2299 2581801 - 2582799 + | glycosyl transferase family protein Bphy_2300 2584180 - 2583062 - | acyltransferase 3 Bphy_2301 2586114 - 2584363 - | hypothetical protein Bphy_2302 2587101 - 2586274 - | hypothetical protein TERM 2717 2586662 - 2586650 - G 72 -3.3 -4.63218 | opp_overlap 2586650, overlap 2586651 GGCGCGTGAACAAAA TGACG AAA CGTCG TATAATCCTTCTTGA TERM 2718 2586834 - 2586815 - G 74 -5 -4.51174 | gap 1, overlap 2586816 TGACCATAAGTAAAA TGCCCGGAC ACC ATCCGG-CA CCGAGCCATACGGCG Bphy_2303 2587482 - 2588405 + | hypothetical protein Bphy_2304 2588428 - 2589261 + | phytanoyl-CoA dioxygenase Bphy_2305 2590363 - 2589338 - | methyltransferase type 11 TERM 2719 2590437 - 2590401 - R 100 -18.2 -2.83894 | overlap 2590403 ATTACGAGTATGACA TATCGTTTCTGGCCGG AAACG CGGGCCAGAAACGATA TACGGGGTGACGTTC TERM 2720 2590435 - 2590403 - R 87 -16.4 -2.96692 | overlap 2590401 TACGAGTATGACATA TCGTTTCTGGCCGG AAACG CGGGCCAGAAACGA TATACGGGGTGACGT Bphy_2306 2591898 - 2590513 - | glycosyl transferase group 1 Bphy_2307 2593562 - 2591949 - | hypothetical protein TERM 2721 2592090 - 2592110 + g 70 -11.1 -3.35073 | ATGCTTTTGTTCTGT CAGTCGCTC GAT GAGCGCCTG TTGATTCAGAGTCGT Bphy_2308 2594659 - 2593562 - | DegT/DnrJ/EryC1/StrS aminotransferase Bphy_2309 2595154 - 2594744 - | WxcM domain-containing protein Bphy_2310 2596115 - 2595141 - | hypothetical protein Bphy_2311 2596795 - 2596118 - | hexapaptide repeat-containing transferase Bphy_2312 2597554 - 2596805 - | hypothetical protein TERM 2722 2596962 - 2596983 + g 71 -12.3 -3.21668 | overlap 2596963 2596967 TCGACCTTGTTGAAT TGGACGACG GGCG CGTCGTCCG TCTTCATGTAGTCCT TERM 2723 2596963 - 2596982 + g 70 -13.6 -2.52519 | overlap 2596962 2596967 CGACCTTGTTGAATT GGACGACG GGCG CGTCGTCC GTCTTCATGTAGTCC TERM 2724 2596967 - 2596985 + g 73 -12.4 -3.31157 | overlap 2596963 2596962 CTTGTTGAATTGGAC GACGGGCG CGT CGTCCGTC TTCATGTAGTCCTTG Bphy_2313 2598937 - 2597585 - | ABC transporter related Bphy_2314 2599784 - 2598927 - | ABC-2 type transporter TERM 2725 2599824 - 2599854 + r 83 -14.6 -3.08798 | overlap 2599817 TTCAATCGTGATCGC GGGCAGCGCGGCCA ATT TGCCTGCGCCGCCC TGTTACATCCACACT Bphy_2315 2600852 - 2599941 - | rhamnosyltransferase TERM 2726 2600036 - 2600071 + g 72 -8.2 -4.11216 | gap 1, opp_overlap 2600036 2600034 GGAAGAACGAATAGA CCAC-GAGCCGGACGGG CAG CTTGACCAGCTCCGTGG TTTTCCAGCTCCACG TERM 2727 2600824 - 2600795 - G 93 -6.3 -5.40072 | gap 1 CCGGGTTGAAAAAAA CGACCACCGCACCG GCA CGGGGC-GCAGCCG ATGTCTGCGTCAAGG Bphy_2316 2601727 - 2600834 - | dTDP-4-dehydrorhamnose reductase Bphy_2317 2602286 - 2601735 - | dTDP-4-dehydrorhamnose 3,5-epimerase Bphy_2318 2603164 - 2602271 - | glucose-1-phosphate thymidylyltransferase TERM 2728 2602662 - 2602679 + g 70 -2.5 -4.67982 | overlap 2602664 GTCACTGCGTAGTTC GAGCGCG GCTT CGCGGGC TTTTCTTCGATCGAC TERM 2729 2603175 - 2603193 + r 74 -11 -3.51232 | overlap 2603170 2603176 GCCATCGTTCCGCCC TTACGCGC GTT GCGCGTAG TTCGTTTCGACCCAC Bphy_2319 2604236 - 2603175 - | dTDP-glucose 4,6-dehydratase Bphy_2320 2605338 - 2604436 - | NAD-dependent epimerase/dehydratase Bphy_2321 2605714 - 2606562 + | bis(5'nucleosyl)-tetraphosphatase, ApaH Bphy_2322 2607428 - 2606577 - | phospholipid/glycerol acyltransferase Bphy_2323 2608756 - 2607479 - | dihydroorotase, multifunctional complex type Bphy_2324 2609838 - 2608798 - | aspartate carbamoyltransferase Bphy_2325 2610418 - 2609906 - | phosphoribosyltransferase Bphy_2326 2610860 - 2610405 - | Holliday junction resolvase YqgF Bphy_2327 2611432 - 2610857 - | hypothetical protein TERM 2730 2611568 - 2611550 - R 70 -3.8 -4.56775 | overlap 2611551 ACGCCGCGCGAAAAA CGCAGTCC ATG AAACTGCA CTCTATCATGCGCCT TERM 2731 2611660 - 2611682 + r 100 -12.7 -5.60993 | gap 1, opp_overlap 2611644 CGTCCCGATGCGATG CGGGC-CGGG TTCG CCCGTGCCCG TTTTTTTATGCGCGG Bphy_2328 2613097 - 2611688 - | hypothetical protein TERM 2732 2612812 - 2612851 + g 72 -12.7 -3.14132 | gap 1, opp_overlap 2612834 CGAGCGCCTTGCTGA ACGCCCGCAGCGCACCGC CAAAC GCAGCGCGC-GCGGGCGC TTCGTCGGGCAGGCC Bphy_2329 2613378 - 2613094 - | hypothetical protein Bphy_2330 2613630 - 2613460 - | rubredoxin-type Fe(Cys)4 protein TERM 2733 2613818 - 2613865 + H 75 -10.5 -3.64703 | opp_overlap 2613813, overlap 2613819 GCATAATTGAGCCGT C-TGTGCAGGCCGCGCGGACGCG TGTG CGCG-CCGAACGGCCTGCGAATG TTTCGCTCAACGACC TERM 2734 2613819 - 2613863 + H 87 -14.2 -3.40597 | gap 1, opp_overlap 2613813, overlap 2613818 CATAATTGAGCCGTC TGTGCAGGCCGCGCGGACGCG TGTG CGCG-CCGAACGGCCTGCGAA TGTTTCGCTCAACGA Bphy_2331 2613894 - 2614754 + | phosphomethylpyrimidine kinase type-1 TERM 2735 2614927 - 2614937 + F 72 -4.6 -4.56597 | ACCTCGTCAGATGCC TGCG CCG CGCG TTTTTACCGCAACGC Bphy_2332 2615093 - 2615752 + | adenylyl-sulfate kinase TERM 2736 2615828 - 2615801 - T 100 -17.2 -4.33675 | opp_overlap 2615801 2615807, overlap 2615807 ACCAGAGCACCAAAA GAAAAACCCGCA TCGC TGCGGGTTTTTC TTTTTTTGGCACGGG TERM 2737 2615801 - 2615828 + T 100 -17.2 -5.40072 | opp_overlap 2615801 2615807, overlap 2615807 ACCAGAGCACCAAAA GAAAAACCCGCA TCGC TGCGGGTTTTTC TTTTTTTGGCACGGG TERM 2738 2615822 - 2615807 - T 100 -10.4 -5.50723 | opp_overlap 2615801 2615807, overlap 2615801 GCACCAAAAGAAAAA CCCGCA TCGC TGCGGG TTTTTCTTTTTTTGG TERM 2739 2615807 - 2615822 + T 100 -10.4 -5.86609 | opp_overlap 2615807 2615801, overlap 2615801 GCACCAAAAGAAAAA CCCGCA TCGC TGCGGG TTTTTCTTTTTTTGG Bphy_2333 2617533 - 2615893 - | chaperonin GroEL Bphy_2334 2617868 - 2617578 - | chaperonin Cpn10 TERM 2740 2617776 - 2617809 + g 74 -11.7 -3.58162 | overlap 2617772 ATCCGGCTTTTCTGC GGCTGCGTCGGGAAT CACG ATGCCCGATGCGGTC TTGGTTTCCTGATCC Bphy_2335 2618401 - 2619231 + | putative GAF sensor protein Bphy_2336 2620679 - 2619651 - | hypothetical protein TERM 2741 2620937 - 2620961 + r 79 -12.9 -3.28712 | opp_overlap 2620935 GCGCGACACATTACC GTGGGGTGGAT GAC ATCCACGCCAC TTATCCGCACGCCCC TERM 2742 2621011 - 2620987 - R 100 -15.8 -5.93809 | opp_overlap 2620987 GCCCCAGAAAAAAAA TCGCCAGCAC GCGAG GTGCTGGCGA TTATCGACAACGCGC TERM 2743 2620987 - 2621011 + r 89 -15.8 -3.28712 | opp_overlap 2620987 GCCCCAGAAAAAAAA TCGCCAGCAC GCGAG GTGCTGGCGA TTATCGACAACGCGC Bphy_2337 2622437 - 2621040 - | major facilitator transporter TERM 2744 2621822 - 2621848 + g 73 -5.7 -4.37092 | opp_overlap 2621800 2621798 2621820, overlap 2621823 GCGTCACGATGAAGC TGCGCAGCGCC TGTGC GCCGCTGCCCG TTTTCTGCCCGAGAT TERM 2745 2621937 - 2621880 - G 71 -9.6 -3.78934 | gap 2, overlap 2621882 CCTGGCCCAGAAGAA CAGCGCGACGGCAGCGAGGCCCAGCAGC GGCA GC-GCGGCGCC-CGCAGCCTTCGCCCAG CCGAAATGATCGGCA Bphy_2338 2623290 - 2622490 - | methyl-accepting chemotaxis sensory transducer TERM 2746 2623634 - 2623617 - R 93 -12.7 -4.4078 | GTCCGCCAATGAAAA GCGCCCT TTTC AGGGCGC TTGCGCGCGCCTCAA Bphy_2339 2624901 - 2623705 - | monosaccharide-transporting ATPase Bphy_2340 2626475 - 2624898 - | D-xylose ABC transporter, ATPase subunit TERM 2747 2626546 - 2626500 - R 100 -17.4 -3.76224 | opp_overlap 2626498, overlap 2626502 2626503 CCTGGATGGATGAAA GATGCGCGGGCGCTTCC-CGTC ACGAA GACGAGGAAGCGCCCGTGC-CC GCTATCAGTTGCCAG TERM 2748 2626545 - 2626502 - R 100 -18.9 -3.46647 | gap 1, opp_overlap 2626498, overlap 2626500 2626503 TGGATGGATGAAAGA TGCGCGGGCGCTTCC-CGTC ACGAA GACGAGGAAGCGCCCGTGCC CGCTATCAGTTGCCA TERM 2749 2626544 - 2626503 - R 100 -22.4 -2.67667 | gap 1, opp_overlap 2626498, overlap 2626502 2626500 GGATGGATGAAAGAT GCGCGGGCGCTTCC-CGTC ACGAA GACGAGGAAGCGCCCGTGC CCGCTATCAGTTGCC Bphy_2341 2627579 - 2626551 - | D-xylose ABC transporter, periplasmic substrate-binding protein TERM 2750 2626637 - 2626656 + g 71 -9.2 -3.6968 | GCAGCGTCGGTTGCA GCAGGACG GTAT CGACCTGC TTCTTGCCGTTGTCG TERM 2751 2626893 - 2626917 + g 93 -14.3 -4.09963 | overlap 2626895 GCCTGCCGTGCCGTC GTTCGACGCGA CGA TCGCGTCGATC TTGTTGTTGTTCGCA TERM 2752 2626895 - 2626915 + g 90 -15.5 -3.63645 | overlap 2626893 CTGCCGTGCCGTCGT TCGACGCGA CGA TCGCGTCGA TCTTGTTGTTGTTCG TERM 2753 2627432 - 2627413 - G 75 -10 -3.90112 | overlap 2627415 GCTGCCGCAACGAAA TAGTCGCG ATCG CGCGACCA GCGCTCGACGCGCAG Bphy_2342 2629118 - 2627793 - | xylose isomerase TERM 2754 2630156 - 2630138 - g 74 -10.2 -3.76402 | opp_overlap 2630141 AGGGCACCGAGGAAA TGGGCCGC ACC GCGGCGCA CCTGCTGCATCAGAT Bphy_2343 2629396 - 2630640 + | AraC family transcriptional regulator Bphy_2344 2630663 - 2631754 + | aldose 1-epimerase TERM 2755 2632700 - 2632678 - g 77 -12.6 -3.65522 | GACGCAGCTGAACAA GCGCCGCACC ATC GGCGCGGTGC TGGTGCTCGGGTCCA Bphy_2345 2632001 - 2632747 + | PepSY-associated TM helix domain-containing protein TERM 2756 2632818 - 2632783 - T 70 -3.8 -4.59109 | opp_overlap 2632788 2632790, overlap 2632788 CAGACGCTGGAAAAA CCGAAGAGCGATGCGC GATG GCGCGTCGCCCTTTTC GTTGTGCCGCTTGCC TERM 2757 2632813 - 2632788 - T 79 -12.5 -3.45031 | opp_overlap 2632788 2632790, overlap 2632783 GCTGGAAAAACCGAA GAGCGATGCGC GATG GCGCGTCGCCC TTTTCGTTGTGCCGC TERM 2758 2632788 - 2632813 + T 100 -12.5 -4.48987 | opp_overlap 2632783 2632788, overlap 2632790 GCTGGAAAAACCGAA GAGCGATGCGC GATG GCGCGTCGCCC TTTTCGTTGTGCCGC TERM 2759 2632790 - 2632811 + T 74 -13.7 -2.56864 | opp_overlap 2632788 2632783, overlap 2632788 TGGAAAAACCGAAGA GCGATGCGC GATG GCGCGTCGC CCTTTTCGTTGTGCC Bphy_2346 2633612 - 2632839 - | short-chain dehydrogenase/reductase SDR TERM 2760 2633818 - 2633797 - g 86 -9.3 -4.45945 | opp_overlap 2633808, overlap 2633809 2633810 AGTCAGCAAGGAAAA GGCGGCGCA AAAC CGCGCGGCC CTCGTCCAAACGGCC TERM 2761 2633839 - 2633809 - g 79 -10.3 -4.0896 | opp_overlap 2633808, overlap 2633797 2633810 AAAGGCGGCGCAAAA CCGCGCGGCCCTC GTCCA AACGGCCGCGCGC CTGTTCCGTGAACGC TERM 2762 2633838 - 2633810 - g 76 -13.8 -3.04894 | opp_overlap 2633808, overlap 2633797 2633809 AAGGCGGCGCAAAAC CGCGCGGCCCTC GTCCA AACGGCCGCGCG CCTGTTCCGTGAACG TERM 2763 2634079 - 2634065 - g 95 -7.8 -5.06414 | TTGTCGGAAGAAAAA CGCGAC GAC ATCGCG AACGGCTGCGCGCTG Bphy_2347 2633777 - 2634361 + | TetR family transcriptional regulator TERM 2764 2634441 - 2634403 - f 91 -8.1 -5.08088 | gap 2, overlap 2634404 AACCTGCAACAAAAA CGCG-ACGC-GATCCGCGC ATA GCGCACATCCGCGAGCGCG ACGCCTTGAACTCGC Bphy_2348 2634464 - 2634859 + | hypothetical protein TERM 2765 2634903 - 2634888 - T 100 -11.8 -5.59879 | CATAAAGATAAAAAA GCCCGC TTAC GCGGGC AACCTTCTACCAGGA Bphy_2349 2635788 - 2634937 - | binding-protein-dependent transport systems inner membrane component Bphy_2350 2636756 - 2635803 - | binding-protein-dependent transport systems inner membrane component Bphy_2351 2638092 - 2636827 - | extracellular solute-binding protein Bphy_2352 2640141 - 2638159 - | Beta-galactosidase Bphy_2353 2641304 - 2640153 - | ABC transporter related TERM 2766 2641389 - 2641373 - H 100 -10.1 -5.12617 | opp_overlap 2641372 2641385 GAATGACCGAAAAAA CGACCGC TAG GCGATCG CTGGTCTTTCTGAAG TERM 2767 2641555 - 2641582 + G 74 -11.2 -3.56092 | gap 1, opp_overlap 2641549 TTGAGCGAAGTCGCG CGGCGCGCCGGCG TCA CGTCGGC-CACCG TTTCGAACGTGCTGC TERM 2768 2642191 - 2642175 - g 91 -9.3 -4.72272 | GGTGCTCACGAAAAA CGTGCGC TAC GCGCCCG ATACGATCGAAGGCG Bphy_2354 2641531 - 2642565 + | LacI family transcription regulator Bphy_2355 2642850 - 2643833 + | MerR family transcriptional regulator TERM 2769 2643854 - 2643827 - T 86 -12 -4.07568 | gap 1, opp_overlap 2643853 GTGGGTGCTGGAAAA CCG-CTGAGCGTG CAC CACGCACAGGCGG CCCATCGGCTGCGCG Bphy_2356 2644853 - 2643894 - | diguanylate cyclase with GAF sensor TERM 2770 2644908 - 2644873 - R 75 -10.5 -3.63744 | gap 1, overlap 2644871 GGTCCGGTTAAAACA CGA-ACGCGCGATGCT GGTTT AGCACCCCGCGTGTCG CCGCAGGTTGAACGG Bphy_2357 2646623 - 2645022 - | PAS/PAC sensor hybrid histidine kinase TERM 2771 2645993 - 2646034 + g 72 -11.5 -3.55444 | gap 1, opp_overlap 2645982 GCAACTGTTGCGTCA GCGTGG-TCGCCTTCGCGAC CGC GCCGCGGATGCGATCCAGGC TTTGCGCCATCACCG TERM 2772 2646741 - 2646710 - H 90 -10.8 -4.56597 | overlap 2646711 2646712 CTCCGGTTCGAAAAA GGCCACATCGGTCC GCGC GGACCGATGCGGAG TCGCAATATGCGTTG TERM 2773 2646740 - 2646711 - H 87 -14.3 -3.33744 | overlap 2646710 2646712 TCCGGTTCGAAAAAG GCCACATCGGTCC GCGC GGACCGATGCGGA GTCGCAATATGCGTT TERM 2774 2646739 - 2646712 - H 87 -17.8 -2.60032 | overlap 2646711 2646710 CCGGTTCGAAAAAGG CCACATCGGTCC GCGC GGACCGATGCGG AGTCGCAATATGCGT TERM 2775 2647581 - 2647606 + G 86 -13.3 -3.84825 | gap 1 GCGCGCATGCTGGGG CGCGCGG-ACGT GCT GCGTACCGCGCG TTTCGTGTCGGTGCA Bphy_2358 2647077 - 2648072 + | aldo/keto reductase Bphy_2359 2649495 - 2648440 - | alcohol dehydrogenase TERM 2776 2648863 - 2648880 + g 75 -6.9 -4.3739 | opp_overlap 2648863 GCCAAGCCCGTCAAA GACGACG TCTA CGCCGTC TTTTGTGAGGCGATG TERM 2777 2649844 - 2649820 - H 88 -17.1 -2.87881 | opp_overlap 2649816 2649816 TAACCTTGCCAGATA CCCGGGGCGTG AAG CACGCCCCGTG CAGACTTTAGTGCGA Bphy_2360 2650114 - 2650566 + | pyridoxamine 5'-phosphate oxidase-related FMN-binding TERM 2778 2650627 - 2650652 + G 84 -11.8 -3.98826 | ACATCGTCCCAGGTG GGCGGCCTGC GCCAAA GCGGGCTGCC TTTATGCATTGATCG TERM 2779 2650716 - 2650759 + G 71 -12.4 -3.27298 | gap 1 GCGTCCTGCTGCTTA TGCCGCTCCTGGGCGAGACGG CAG CCGTATCGCTC-GAAGCGCCA TTCATGCTTGCCGCG Bphy_2361 2650598 - 2651038 + | hypothetical protein TERM 2780 2651226 - 2651193 - T 87 -15.3 -3.32022 | TGGCCGACAGATCAA CATCCAGTGTGGCCC GCCT GGACCACGCTGGACG CAACCACCACTGTGC Bphy_2362 2654882 - 2651247 - | 5-oxoprolinase (ATP-hydrolyzing) Bphy_2363 2656237 - 2654930 - | major facilitator transporter Bphy_2364 2657187 - 2656414 - | hypothetical protein TERM 2781 2657333 - 2657371 + H 86 -8.9 -4.58283 | gap 1, opp_overlap 2657332 CGAATGAATAGAATT TCTTAACGCATTCGCGGG TTTT CCCG-GATCGCGTTGAGA TTTTTGGAACAGTTC Bphy_2365 2657415 - 2658347 + | LysR family transcriptional regulator Bphy_2366 2659710 - 2658415 - | FAD dependent oxidoreductase Bphy_2367 2660471 - 2659713 - | ABC transporter related Bphy_2368 2661124 - 2660468 - | polar amino acid ABC transporter, inner membrane subunit TERM 2782 2660744 - 2660770 + g 88 -17.3 -3.12668 | opp_overlap 2660725 CCGCATGATCAGCGG GCCGCGCATGC CGATC GCGTGCGCGGC TTCGATCTGCCCGTG Bphy_2369 2661976 - 2661206 - | extracellular solute-binding protein TERM 2783 2661860 - 2661896 + g 78 -12.9 -3.53091 | overlap 2661861 GAACGGCACGCCCGT GGCCGTTGCGCCGACCT TGT AGGTCGGTTCGGCGGCA TTTGCGGCACCGGAT TERM 2784 2661861 - 2661895 + g 81 -16.4 -2.71712 | overlap 2661860 AACGGCACGCCCGTG GCCGTTGCGCCGACCT TGT AGGTCGGTTCGGCGGC ATTTGCGGCACCGGA TERM 2785 2661992 - 2662021 + H 78 -9.9 -3.97088 | overlap 2661995 GCATATCTCCGGGCA GGAGCCGGCGTGT CAAC ACGCGCCGGCTGA TTTCATGTTGTGACC TERM 2786 2661995 - 2662018 + H 88 -16 -3.0364 | overlap 2661992 TATCTCCGGGCAGGA GCCGGCGTGT CAAC ACGCGCCGGC TGATTTCATGTTGTG TERM 2787 2662797 - 2662833 + G 81 -16.5 -2.78384 | CGATCGCCGCACCCG TGATCGGCAGCCAGGGG CGT CCCGTGGCTGCCGTCCA TGTCGTGGCGCCCAC Bphy_2370 2662139 - 2662945 + | IclR family transcriptional regulator TERM 2788 2663388 - 2663411 + T 71 -12.4 -3.01712 | CGTCCTTTGGCATTC GCTCGGGAAG TCTA CTGCCCGAGC TCTTCGGCGAGCCCG Bphy_2371 2663824 - 2663399 - | glyoxalase/bleomycin resistance protein/dioxygenase Bphy_2372 2664203 - 2663871 - | hypothetical protein Bphy_2373 2664482 - 2665639 + | fibronectin, type III domain-containing protein Bphy_2374 2665799 - 2666140 + | hypothetical protein Bphy_2375 2666624 - 2666247 - | hypothetical protein Bphy_2376 2668094 - 2667348 - | hypothetical protein TERM 2789 2667994 - 2667959 - G 74 -4.7 -4.56597 | gap 2 TCGCGCCGCCAAAAA TCAG-GGA-CGCGGCCG TTGC CGGCTGAGATCCACTGA AGAGAGCAGCGGCGA Bphy_2377 2670241 - 2668091 - | cellulose synthase (UDP-forming) TERM 2790 2668289 - 2668264 - G 71 -4.5 -4.50058 | opp_overlap 2668287, overlap 2668265 TACTGATAATTAAAA TGCCGCCGTTG TGCG CATCGTCGGCG ATCACTACCGGGACC TERM 2791 2670416 - 2670431 + G 77 -11.8 -3.65046 | opp_overlap 2670414, overlap 2670420 CGAATCCCAAAATGT GGCGCC GTGA GGCGCC TTGTTGGGCTCGCGG Bphy_2378 2670365 - 2671531 + | cellulase Bphy_2379 2673570 - 2671855 - | glucose-methanol-choline oxidoreductase Bphy_2380 2674504 - 2673665 - | binding-protein-dependent transport systems inner membrane component Bphy_2381 2675771 - 2674509 - | binding-protein-dependent transport systems inner membrane component TERM 2792 2675724 - 2675745 + g 71 -12.3 -3.20078 | overlap 2675722 2675740 TCGCAGTGATTTCTT GAGCTGGCG CGTG TGCCAGCTC TGTTGCTGTGAAGTA Bphy_2382 2676820 - 2675783 - | extracellular solute-binding protein Bphy_2383 2677947 - 2676856 - | spermidine/putrescine ABC transporter ATPase subunit Bphy_2384 2680630 - 2678132 - | L-carnitine dehydratase/bile acid-inducible protein F TERM 2793 2678974 - 2678945 - G 84 -16.4 -2.89564 | GTCGTAGCCGAGATA GTCGGTCCGCGG TCCGCG CCGCGGACCGCC AAAGCAGTCCAGTTG Bphy_2385 2681807 - 2680902 - | LysR family transcriptional regulator TERM 2794 2682043 - 2682091 + r 78 -4.1 -4.96848 | gap 3 GTTTGCTCAGCCATT TCGAGAGCATCGT-C--TACCTCG ATCC CGAGATATCGCACGGTGCTTTCGA TTTTTGTATGGCCCA Bphy_2386 2682644 - 2682018 - | integrase family protein Bphy_2387 2683451 - 2682825 - | putative lipoprotein Bphy_2388 2684365 - 2683718 - | hypothetical protein Bphy_2389 2684960 - 2684562 - | hypothetical protein TERM 2795 2684933 - 2684917 - G 85 -7.9 -4.63486 | opp_overlap 2684916 2684917 AGCGCTGGAACAAAA CGCGCTT TCA ATGCGCG ATTCATTTCGTCACG Bphy_2390 2685407 - 2685150 - | hypothetical protein Bphy_2391 2685929 - 2685429 - | hypothetical protein TERM 2796 2685970 - 2685990 + H 76 -3.2 -5.0133 | opp_overlap 2685960, overlap 2685971 AGTCAGTGACGCCGT TGGCGCTA CTCGA TAGCTCCG TTTTTTGCCGAGATC TERM 2797 2686794 - 2686784 - g 79 -2.4 -5.00616 | overlap 2686786 TGGTTCGGCAAAAAA GAGC GCG GCGC CGCCACCGGCATCTG TERM 2798 2686910 - 2686933 + G 93 -5.8 -5.31877 | GGCGTCATGGGAATC GCCGGCCTCC TCGT GGCGCTCGGC TTTTTTATCATGCAT Bphy_2392 2686313 - 2687665 + | major facilitator transporter Bphy_2393 2688779 - 2687715 - | malate/L-lactate dehydrogenase TERM 2799 2689424 - 2689442 + G 70 -5.8 -4.24948 | ATTGGGCGCCCGACC GAGCCACG ACA CGAGGCGC TTTTCGATGTGATCG Bphy_2394 2688932 - 2689876 + | LysR family transcriptional regulator Bphy_2395 2691209 - 2690088 - | hypothetical protein TERM 2800 2691096 - 2691070 - G 70 -5.9 -4.2349 | gap 2 GCGCTATAGTCAAAA CGGTCCGCCACGA TGG TCGTAG-GG-CCG AGGGATGTGCAGCCC Bphy_2396 2692720 - 2691305 - | hypothetical protein Bphy_2397 2694541 - 2692823 - | sulphate transporter TERM 2801 2694607 - 2694567 - H 76 -6.8 -4.4267 | gap 1, overlap 2694560 2694568 CGGGAAAAGCCAAAA CGCACCAGGGAGTGCGACG CTGG CGTCGGG-TCCCTGATGCC GCGTGCAGAGCGCAA Bphy_2398 2695066 - 2695656 + | hypothetical protein TERM 2802 2695723 - 2695692 - T 74 -11.5 -3.53012 | overlap 2695693 GCGGCTCCGTCGAAA GCGACGCAGCTGC GCATGG GCGGCTGCGTCGG AACAAACGTACGGGC TERM 2803 2695722 - 2695693 - T 83 -15 -2.71712 | overlap 2695692 CGGCTCCGTCGAAAG CGACGCAGCTGC GCATGG GCGGCTGCGTCG GAACAAACGTACGGG Bphy_2399 2696591 - 2695779 - | ROK family protein Bphy_2400 2698218 - 2696632 - | glucose-6-phosphate 1-dehydrogenase TERM 2804 2697155 - 2697112 - G 74 -5 -4.52589 | overlap 2697145 CGTGCGCAGATAAAA CGGCACGCCCGCCCAACGCC AGTT GTCGATGAATACGCGCGCCG CCGCATAGGTCTCCG TERM 2805 2698107 - 2698160 + g 88 -17.4 -3.06261 | gap 3, opp_overlap 2698093 2698095 2698092 TGACGAGCGTGCACG GCGGCGC-GGGCCGCTTGCCCGCAGGG CCG CCC-GCTG-CATGCGGCCCCGCGCCGA TCTTGCAGCTTGCGG Bphy_2401 2701057 - 2698322 - | hypothetical protein TERM 2806 2700018 - 2700000 - G 72 -8.8 -4.03978 | opp_overlap 2699999 AATGCCGCATAGAAA GCATCGGC CTC GGCGATGC GTTGCGTAAAAAGGT TERM 2807 2700339 - 2700366 + g 84 -12 -3.967 | gap 1 TGGCCGGGATGCGTG CCGAGCA-GGCGT GTG ACGCCATGCACGG TTTCCTTCGTGAGTT Bphy_2402 2703087 - 2701162 - | glycogen debranching enzyme TERM 2808 2701355 - 2701318 - G 76 -9.7 -4.1552 | gap 1 GAGCGGCGCAAGAAA GCGCGAACG-CGCTGCGC CGA GTGCTGCGTCGTCCGGGC GTTGCACGCGCAGCC TERM 2809 2703199 - 2703221 + r 73 -12 -3.07935 | GTCTTGCGCGCTTGA GCCACTCCAG CAG CTGAAGTGGC TTCCGTGGCTCCAGT Bphy_2403 2704655 - 2703258 - | integral membrane sensor signal transduction histidine kinase TERM 2810 2703474 - 2703500 + g 71 -10.8 -3.62597 | CGCGTTCTTGCCGCG CTGGAACGGCGC CTT GAGCCGTTCGAG TTCTTCCGCGCTCAA TERM 2811 2704507 - 2704527 + g 93 -18.3 -3.31792 | opp_overlap 2704502 GCGCCGAACACGGCG GCCGCGCGT TCG ACGCGCGGC TTCTGCACATAGTGA Bphy_2404 2705419 - 2704652 - | two component transcriptional regulator Bphy_2405 2705730 - 2705437 - | hypothetical protein Bphy_2406 2705771 - 2706016 + | hypothetical protein Bphy_2407 2706064 - 2706420 + | hypothetical protein Bphy_2408 2706539 - 2707009 + | Ferritin Dps family protein TERM 2812 2707024 - 2707062 + F 76 -11.7 -3.32844 | AATTCTTCGCTGCTG TCAGGGCGCGAACGCA-CG TTT CGATGCGGCCGCGCCC-GA TTGTCAAATCACCCA TERM 2813 2707133 - 2707165 + F 100 -17.8 -3.78953 | opp_overlap 2707133 CGGCTTATCGGCAAA CGCCGCATGTATCG ACACA CGGTGCATGCGGCG TTTCCTGCTGCGCAT TERM 2814 2707165 - 2707133 - f 83 -13.4 -3.57144 | opp_overlap 2707133 CGGCTTATCGGCAAA CGCCGCATGTATCG ACACA CGGTGCATGCGGCG TTTCCTGCTGCGCAT TERM 2815 2708982 - 2708953 - g 89 -18.6 -2.90075 | GCTGGTGGAACGACA CGGCGACGGGCA CGGCAC CGCCCGTCGCCG CATCGCAGTGAGCCC Bphy_2409 2707542 - 2708993 + | RND efflux system outer membrane lipoprotein TERM 2816 2709639 - 2709604 - g 84 -6.9 -4.77165 | gap 2, overlap 2709605 2709608 TCGTCGACAAGAAAA CGAT-CCG-CGCGCCGT TCGC AGGGCGCGTCGGCATCA CGACGGTCAACCCGG Bphy_2410 2709093 - 2710244 + | RND family efflux transporter MFP subunit Bphy_2411 2710255 - 2713296 + | acriflavin resistance protein TERM 2817 2713382 - 2713371 - f 81 -3.6 -5.16969 | CAGACAAAAAACAAA GGAG CCAA CCCC AATGTTCAGCACCAC Bphy_2412 2713384 - 2714025 + | lysine exporter protein LysE/YggA Bphy_2413 2714910 - 2714026 - | transporter DMT superfamily protein TERM 2818 2714964 - 2714946 - H 70 -3.7 -4.57341 | overlap 2714933 AAGGGCGCGGAAAAA CCGCGCG AAAAA CAAGCGG GAAAAGCTTCGGCCA Bphy_2414 2715263 - 2716051 + | hypothetical protein Bphy_2415 2716355 - 2716101 - | hypothetical protein TERM 2819 2716444 - 2716432 - R 73 -3.3 -4.83615 | overlap 2716437 CACGGCGCACAAAAA CGAAG GTC CGTCG CCTATCGGCGAGGCA TERM 2820 2716597 - 2716623 + r 76 -12.2 -3.46602 | opp_overlap 2716597 2716618 GCAGCATCAAGCGAA GCGGGCTCCCTT CCT ACGAGAGCCCGC TTGTCATGTCAGCAG TERM 2821 2716623 - 2716597 - R 86 -14.4 -3.21695 | opp_overlap 2716597, overlap 2716618 GCAGCATCAAGCGAA GCGGGCTCCCTT CCT ACGAGAGCCCGC TTGTCATGTCAGCAG TERM 2822 2716699 - 2716643 - R 100 -19.3 -3.09834 | gap 1, opp_overlap 2716655, overlap 2716618 CATGTCAGCAGGCAA GCGCG-CCGCAACCGGCAGCGCGCCG TCCTTC CGGCGAGCGGCTGGCTGCCGCCGCGC GCGCAGATCGTGCAA Bphy_2416 2717101 - 2716745 - | transport-associated Bphy_2417 2717644 - 2719170 + | hypothetical protein TERM 2823 2719338 - 2719298 - f 73 -11.7 -3.04231 | overlap 2719295 2719301 AGATCGAAACAATCA GAATCGGCTGACGCGCGGC ATC GCCGACAGCCCGCCGATTC AGGCAACCGGGAGAC TERM 2824 2719324 - 2719301 - f 72 -9.6 -3.65135 | gap 1, overlap 2719298 2719295 TCGAAACAATCAGAA TCGGCTGACGC GCG GCATC-GCCGA CAGCCCGCCGATTCA Bphy_2418 2719357 - 2720001 + | DSBA oxidoreductase TERM 2825 2720909 - 2720851 - g 87 -18.2 -2.78384 | gap 3, opp_overlap 2720890 2720893 CGCCCGCGCATTACA GCGGCGCG-CGCGGCG-GCGCGATCGA CACGGGCT TCGCGCGCGCGCGC-GCGTCGCGCCGC ATCGTCGCGACGTTG TERM 2826 2721241 - 2721210 - g 100 -17.2 -5.75945 | overlap 2721192 ACGGCGGAAAAAAAA GCGGGCGCAGCCAG TGTG CCCGCCGCGCCCGC TGGAGGAAGCGGTCA Bphy_2419 2720232 - 2721260 + | LysR family transcriptional regulator Bphy_2420 2721852 - 2721262 - | xanthine dehydrogenase accessory protein XdhC Bphy_2421 2724232 - 2721875 - | xanthine dehydrogenase, molybdopterin binding subunit Bphy_2422 2725783 - 2724266 - | xanthine dehydrogenase, small subunit TERM 2827 2726687 - 2726699 + G 72 -3.3 -4.59773 | overlap 2726683 2726686 CGGCGTATGGATCTC GCACA GCG TGGGC TTTTTCGCGCTCGGG TERM 2828 2727011 - 2727026 + G 73 -6 -4.42639 | overlap 2727009 GTACGGCGGGTTTCG CGTCGC GATC GCGTCG TTTTCCTTCGAATGT Bphy_2423 2726169 - 2727380 + | major facilitator transporter TERM 2829 2727531 - 2727512 - T 78 -9.2 -3.96188 | AACCAGATGTACAAA GCGGATGC CCGC GCAGCCGC AAAAACCTCGTCCCA TERM 2830 2727577 - 2727558 - T 75 -8.6 -4.08485 | gap 1 CCCAGCGAAAGCAAA CCTGGCGAC TAC GTCGC-AGG CACAACAAAAAATCA Bphy_2424 2728810 - 2727590 - | aminotransferase class V TERM 2831 2727946 - 2727956 + g 72 -8.2 -4.10657 | opp_overlap 2727928 AGCACCTCAGATGCC GCGC GAA GCGC TTTTCCAGCGTCTCC TERM 2832 2728848 - 2728893 + r 88 -16 -3.13164 | opp_overlap 2728852, overlap 2728851 GTGAACGTTGCAGAA AAAAGGCCCGCCGCGCGCAG CAGCAC CTGCGGGCGGCGGGCCGTCG TTCGATCATTCACCC TERM 2833 2728851 - 2728890 + r 100 -22.1 -2.77235 | opp_overlap 2728852, overlap 2728848 AACGTTGCAGAAAAA AGGCCCGCCGCGCGCAG CAGCAC CTGCGGGCGGCGGGCCG TCGTTCGATCATTCA TERM 2834 2728889 - 2728852 - R 100 -25.6 -5.24531 | opp_overlap 2728851 2728848 ACGTTGCAGAAAAAA GGCCCGCCGCGCGCAG CAGCAC CTGCGGGCGGCGGGCC GTCGTTCGATCATTC Bphy_2427 2729881 - 2729621 - | hypothetical protein Bphy_2428 2730101 - 2731090 + | LysR family transcriptional regulator Bphy_2429 2731154 - 2732161 + | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding Bphy_2430 2732751 - 2732194 - | hypothetical protein TERM 2835 2732881 - 2732901 + H 79 -13.3 -3.14422 | overlap 2732874 2732873 2732870 CGCCCCGTTCGCCAC GCATCGTCG CTT CGGCGATGC TGTTCGAGTTGTTTT Bphy_2431 2733033 - 2733911 + | enoyl-CoA hydratase/isomerase TERM 2836 2734403 - 2734432 + G 88 -9.9 -4.60041 | overlap 2734385 2734384 GTGCTGATGGCCGCG CGCATCGTGACCG CGTT CTGCCACGGTGCG TTTTTCGGCATCGGT Bphy_2432 2734112 - 2735269 + | major facilitator transporter TERM 2837 2735965 - 2735976 + G 72 -3.6 -4.62302 | overlap 2735963 ATGCCTGCGCTCGTG GTCG GGAC CGGC TTTTTCGCGCTGTTC TERM 2838 2736475 - 2736501 + G 80 -15.8 -2.90496 | opp_overlap 2736476, overlap 2736472 ATGCTGTGGGAAAAA AGACGCGGCGTG GCG CGCGCCGCGTCC TGATTTCGCGGGCGA TERM 2839 2736500 - 2736476 - g 100 -17.1 -5.00616 | opp_overlap 2736475 2736472 TGCTGTGGGAAAAAA GACGCGGCGTG GCG CGCGCCGCGTC CTGATTTCGCGGGCG Bphy_2433 2735347 - 2736504 + | major facilitator transporter Bphy_2434 2737828 - 2736518 - | fumarylacetoacetase Bphy_2435 2739147 - 2737825 - | homogentisate 1,2-dioxygenase Bphy_2436 2739336 - 2740208 + | putative diguanylate phosphodiesterase Bphy_2437 2741039 - 2740215 - | IclR family transcriptional regulator Bphy_2438 2741157 - 2742347 + | acyl-CoA dehydrogenase domain-containing protein TERM 2840 2742378 - 2742412 + T 100 -17.3 -4.68593 | opp_overlap 2742383, overlap 2742383 CAAACGGCGCCTATT TAAAAGCCCGCGTTC TCAAC GAACGCGGGCTTTTC TTTTTGCCTCGTCAG TERM 2841 2742383 - 2742407 + T 100 -17.2 -5.2853 | opp_overlap 2742383, overlap 2742378 GGCGCCTATTTAAAA GCCCGCGTTC TCAAC GAACGCGGGC TTTTCTTTTTGCCTC TERM 2842 2742407 - 2742383 - T 100 -17.2 -4.18018 | opp_overlap 2742383 2742378 GGCGCCTATTTAAAA GCCCGCGTTC TCAAC GAACGCGGGC TTTTCTTTTTGCCTC Bphy_2439 2743076 - 2742438 - | peroxidase TERM 2843 2743388 - 2743412 + H 100 -13.6 -4.56702 | gap 1 CGTAACCCATGCGCA CGGTCCGCTGG CTCG CCAGCGG-CCG TTTCTTTGGTTACGA Bphy_2440 2743460 - 2743762 + | protein of unknown function DUF883 ElaB TERM 2844 2743774 - 2743801 + F 76 -14 -2.75064 | opp_overlap 2743763, overlap 2743770 GTAATGCGCGCGAAG CCCCGGCCGCGC ATTC GGGCGGCCGGCG TACTTCGCTGACAGG Bphy_2441 2743882 - 2744265 + | putative transmembrane protein Bphy_2442 2744308 - 2744793 + | hypothetical protein TERM 2845 2744801 - 2744815 + T 74 -7.8 -4.2349 | opp_overlap 2744784 CGCCCTGACATGGCG CGCGTC GTC GATGCG TTTTCCATCTAGCGC TERM 2846 2744846 - 2744872 + T 71 -7.3 -4.20768 | gap 1 GCACTCCAGCAATCG TCGGGGT-TGGC GCCC GCTGCACCCCGA TTGTTTCTTAGCCCT Bphy_2443 2745243 - 2744824 - | hypothetical protein TERM 2847 2745186 - 2745170 - G 77 -12.3 -3.57462 | GACGGTATTGCGAAA GCAGCGA GCG TCGCTGC GATCGCCAGTGCGAC Bphy_2444 2745791 - 2745267 - | hypothetical protein Bphy_2445 2746630 - 2745788 - | hypothetical protein Bphy_2446 2747061 - 2746627 - | hypothetical protein Bphy_2447 2747618 - 2747058 - | hypothetical protein TERM 2848 2747434 - 2747376 - G 76 -13.7 -3.12895 | gap 1, overlap 2747344 2747374 2747372 CGCCGTAGCAAGACA GTGACGCGCCGCGTCGACGCGGCACACG GTCA CGCGTGC-GCCCCGGCGCAACGCCTCGC CGCGCGCGTAGCTGA Bphy_2448 2748285 - 2747791 - | ATP-cone domain-containing protein TERM 2849 2748203 - 2748223 + g 81 -15.4 -3.01712 | GCCGGGCAACGCCGG CGGCGCCG GATCG CGGCGCCG TCTTCGGACACCCGC Bphy_2449 2749539 - 2748292 - | glycine hydroxymethyltransferase TERM 2850 2748373 - 2748411 + g 84 -14.6 -3.39895 | opp_overlap 2748393 CGTGTCTTCGGGGTT GTCCAGCACGTCGGCAAT CAG GTTGCCGACCTGCTCGGC TTCCTTCGTACCGAA TERM 2851 2748463 - 2748481 + g 79 -10.2 -4.12902 | opp_overlap 2748456, overlap 2748475 CGAACCGAGACGGAT GCCGCTCG TCA CGAACGGC TTTTCCGGGTCATTC TERM 2852 2749239 - 2749222 - G 70 -2.6 -4.60487 | CAGCATCGCGAAAAA CACGCC CTGGTT GGCCTG CGAGCCCGAGTTCGG TERM 2853 2750149 - 2750107 - g 90 -15.5 -3.53012 | gap 1, overlap 2750145 CGGGCTTTCGTCAAA GGCGGCCATCGCGTCGTCGC AACC GCG-CGCCGCAAGGACCGCC TTCAGGCGCTCGCTG TERM 2854 2750656 - 2750629 - g 75 -3.4 -4.77036 | gap 1, overlap 2750649 GGCGACGAGGAAAAA GCTGCGACCGTCT ACC AGAACGTC-CAGC CGCTCACGGCGGAAG Bphy_2450 2750041 - 2750787 + | short-chain dehydrogenase/reductase SDR Bphy_2451 2750912 - 2751391 + | tol-pal system-associated acyl-CoA thioesterase TERM 2855 2751618 - 2751633 + G 75 -6.8 -4.33274 | overlap 2751612 AGCCTGCTGGCGCAG GCAGTG ATGG CGCTGC TTTTGCTGCTGTCGC TERM 2856 2751867 - 2751851 - g 79 -6.5 -4.47271 | overlap 2751852 GAAAGGCAAGGAAAA GCGGATC AAC GATCCGG GCGCGATTCTCGATG Bphy_2452 2751555 - 2752232 + | protein TolQ Bphy_2453 2752244 - 2752690 + | protein TolR Bphy_2454 2752687 - 2753742 + | protein TolA TERM 2857 2754540 - 2754515 - g 93 -4.7 -5.45802 | GTTCGAAAAGAAAAA GCCGATCGT CTATATCC ACGATCTGC CGACGGGCCGCCGCG TERM 2858 2754817 - 2754794 - g 77 -13.2 -3.39327 | gap 1 GCCGCAGATCTACAA GATGCC-CGCC AGC GGCGAGGCATC GGGCGGCGCACAGCG Bphy_2455 2753859 - 2755151 + | beta-propeller repeat-containing to-pal system protein TolB TERM 2859 2755619 - 2755608 - g 78 -3.6 -4.86731 | overlap 2755609 CCTGGGCAAAGAAAA GCCG CAGG CGAC GGGTCATGACGAAGC TERM 2860 2755660 - 2755650 - g 72 -8.2 -4.07568 | opp_overlap 2755656 GTCGTGGGCGCAAAA CCGC CGC GCGG ACCTCGTCTATCAAC Bphy_2456 2755171 - 2755680 + | peptidoglycan-associated lipoprotein TERM 2861 2755927 - 2755893 - g 81 -14.2 -3.44051 | overlap 2755894 2755914 CCTCGACCAGCAGAA CCGTCTCGACCAGCTG AAC CAGCAGGTCGCGACGC TGCGCGGGCAGAACG TERM 2862 2755926 - 2755894 - g 84 -17.7 -2.66216 | overlap 2755893 2755914 CTCGACCAGCAGAAC CGTCTCGACCAGCTG AAC CAGCAGGTCGCGACG CTGCGCGGGCAGAAC TERM 2863 2756382 - 2756364 - g 71 -4.5 -4.56597 | GGCTGCCGCCAAAAA GACGCTC GAACA GATCGTC GCGCAGTACGGCGGA Bphy_2457 2755696 - 2756445 + | tol-pal system protein YbgF TERM 2864 2756448 - 2756476 + T 85 -10.2 -4.35483 | gap 1, opp_overlap 2756446, overlap 2756451 2756453 GCAGATCAAATGATT CGTGGCGCCCGGC TCGC GCCGGACGTC-CG TTTGTTGTGATGCAG TERM 2865 2756541 - 2756573 + T 100 -15 -4.09685 | opp_overlap 2756546, overlap 2756546 CGCGTGCCTCTCGCC GAAAAGCCCGAAAC TTCCC GTTCCGGGCTTTTC TTTTGAAGCATGCGC TERM 2866 2756568 - 2756546 - T 85 -11.3 -4.07568 | opp_overlap 2756546 2756541 GCCTCTCGCCGAAAA GCCCGAAAC TTCCC GTTCCGGGC TTTTCTTTTGAAGCA TERM 2867 2756546 - 2756568 + T 100 -9.1 -5.07652 | opp_overlap 2756546, overlap 2756541 GCCTCTCGCCGAAAA GCCCGAAAC TTCCC GTTCCGGGC TTTTCTTTTGAAGCA TERM 2868 2756743 - 2756764 + T 100 -15.1 -4.68645 | opp_overlap 2756737 2756735 ACCAAAAGATTCGAA GGGCCTGGC GCAA GCCGGGCCC TTTTCATTTTGCGTC TERM 2869 2757002 - 2756972 - T 81 -11.8 -3.78953 | opp_overlap 2756974, overlap 2756921 ACGTGCACGACGAAA TAGCACGGCACCTG GGA CAGGAGCGGCGCTA TGTCGAGGACGGCAG Bphy_2458 2758330 - 2757263 - | glycosyl transferase group 1 Bphy_2459 2759577 - 2758330 - | polysaccharide biosynthesis protein TERM 2870 2759887 - 2759901 + G 71 -12.8 -2.96692 | GCCCCCATCGCCGAT GCCGCG AGC CGCGGC TATGTCGTCATCATC TERM 2871 2760873 - 2760855 - g 71 -12.4 -3.29144 | opp_overlap 2760847 GTACCGCTTCGACAA GCCCGTGG TCG CCACGAGC GACGGGCTGATCGGC Bphy_2460 2759839 - 2761098 + | glycosyl transferase group 1 Bphy_2461 2762471 - 2761158 - | acyltransferase 3 Bphy_2462 2763741 - 2762596 - | acyltransferase 3 TERM 2872 2763938 - 2763989 + H 71 -10.8 -3.54741 | gap 1, opp_overlap 2763973 CGTGCGCCAAGTTGC TGTCCTT-GTCGGACAGCCTGGCGG ACC CCGCCAAACCGTCTGACTACGGGCA TTTGCCCGCATCGTG Bphy_2463 2764138 - 2765640 + | hypothetical protein Bphy_2464 2765816 - 2767000 + | glycosyl transferase group 1 TERM 2873 2767077 - 2767056 - T 100 -10.1 -5.27335 | opp_overlap 2767057, overlap 2767057 CGCGCCAAAGAAAAA TCCCGCGAT CTGC ATCGCGGGT TTTTTTATGGCGCTA TERM 2874 2767076 - 2767057 - T 88 -13.6 -3.75678 | opp_overlap 2767057, overlap 2767056 GCGCCAAAGAAAAAT CCCGCGAT CTGC ATCGCGGG TTTTTTTATGGCGCT TERM 2875 2767057 - 2767076 + T 100 -13.6 -5.61596 | opp_overlap 2767057 2767056 GCGCCAAAGAAAAAT CCCGCGAT CTGC ATCGCGGG TTTTTTTATGGCGCT Bphy_2465 2768886 - 2767141 - | FAD dependent oxidoreductase Bphy_2466 2769857 - 2769144 - | acetyltransferase TERM 2876 2769205 - 2769189 - G 73 -9.4 -3.85817 | overlap 2769175 ACGCTTGCGGATAAA GCGGCA CGGAT TGCCGC CATACACACCTTCCG TERM 2877 2769668 - 2769654 - G 86 -9.2 -4.57073 | opp_overlap 2769656 CAGCTCGGTGAAAAA GCCGCG CGA CGCGAC GTAATTGCCCTTGCC Bphy_2467 2770070 - 2770675 + | hypothetical protein TERM 2878 2770748 - 2770699 - T 100 -22.4 -4.19817 | opp_overlap 2770702 2770705, overlap 2770700 CTGAGCCATGCAAAA GCCGAAGGCCGCATGCGA-CCGTC CCGT GACGGTTCGCATGCGGCCTTCT-C TCTTTCCGGTGTCAG TERM 2879 2770748 - 2770700 - T 100 -22.6 -3.11569 | gap 1, opp_overlap 2770702 2770705, overlap 2770699 TGAGCCATGCAAAAG CCGAAGGCCGCATGCGA-CCGTC CCGT GACGGTTCGCATGCGGCCTTCTC TCTTTCCGGTGTCAG TERM 2880 2770702 - 2770746 + T 100 -29.6 -3.26745 | gap 1, opp_overlap 2770699 2770700, overlap 2770705 AGCCATGCAAAAGCC GAAGGCCGCATGCGA-CCGTC CCGT GACGGTTCGCATGCGGCCTTC TCTCTTTCCGGTGTC TERM 2881 2770705 - 2770743 + T 100 -25.5 -3.76634 | gap 1, opp_overlap 2770699 2770700, overlap 2770702 CATGCAAAAGCCGAA GGCCGCATGCGA-CCGTC CCGT GACGGTTCGCATGCGGCC TTCTCTCTTTCCGGT Bphy_2468 2772086 - 2770779 - | glycosyl transferase group 1 TERM 2882 2771610 - 2771626 + g 79 -15.1 -3.01712 | GATCCAGTATGCGAT GCGCGCG GCG CGCGCGC TCTTCAACAGGCCGA Bphy_2469 2773341 - 2772199 - | glycosyl transferase group 1 TERM 2883 2772824 - 2772796 - G 85 -12.3 -4.07568 | GCGCTCCGGCGAAAA CGTGACGGGCAGC GCG GCCGCCTGGCACG GAATGAAAATCTTCT TERM 2884 2772940 - 2772919 - G 100 -3.7 -5.50499 | gap 1 GCACAGCGAAAAAAA CACG-CGCTT CGG AATCGACGTG ATGAGCCGCTTTGGA TERM 2885 2773432 - 2773391 - R 78 -6.5 -4.56597 | gap 1, overlap 2773394 TTGCCCTTGCAAAAA GAACGGACGTCGCCCTAATC CCG GTCCCAGGCAACGTCCG-TC ACCAGGAACGGCGCA TERM 2886 2773430 - 2773394 - R 83 -9.3 -4.40561 | overlap 2773391 CCCTTGCAAAAAGAA CGGACGTCGCCCTAATC CCG GTCCCAGGCAACGTCCG TCACCAGGAACGGCG Bphy_2470 2774443 - 2773448 - | NAD-dependent epimerase/dehydratase TERM 2887 2774260 - 2774207 - G 93 -13.9 -4.12532 | gap 3, opp_overlap 2774241, overlap 2774236 2774238 GTTCTCATAGAGAAA CTCGCCGGGCTGCGTCGCGTTGGCGA GAATA CCGCCGACGCG-CGCCGCC-G-CGAG CAGCACGACGTCGAT Bphy_2471 2775576 - 2774449 - | GDP-mannose 4,6-dehydratase TERM 2888 2774555 - 2774579 + g 71 -9.1 -3.74747 | ACGAGCGCCTCGAAC GGCGTGGCGGG TGT CCAGCCGAGCC TTTGCTGCGCCTTCG Bphy_2472 2777916 - 2775691 - | exopolysaccharide transport protein family Bphy_2473 2779148 - 2778009 - | polysaccharide export protein Bphy_2474 2780589 - 2779204 - | undecaprenyl-phosphate glucose phosphotransferase TERM 2889 2779768 - 2779716 - G 71 -9.8 -3.76125 | gap 2, overlap 2779717 TCACCGCAATCGAAA TCGCG-ATCAGCAGCGGC-GCAAGCC CGA GGATCGCAGCCGCGGCGAACACGCGA TCGAACAGGTCCTTC Bphy_2475 2782176 - 2780659 - | mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase TERM 2890 2780881 - 2780833 - G 70 -7.4 -3.96148 | TTCGCTCAGCAGAAA CT-GCTCGTCGCCGCGCGTGACGA GGG CCGTGCCGCGC-ACGACGATCCAG TGCTCCGCGCGATGG TERM 2891 2781203 - 2781223 + g 76 -6 -4.49756 | opp_overlap 2781198, overlap 2781193 CCTTCGAACATCACG CGGCCGCG CGCGA CGTTGCCG TTTTCGTCTTTCGGC TERM 2892 2781740 - 2781692 - G 88 -17.4 -3.05463 | gap 2 AGCGTGGCGATCGAA CCGCGTTGC-GCGTG-GCGCGCGG CGA CCTCGAGCGCGCGCTGCAACGCGG GCACATCGGCGATTG Bphy_2476 2783254 - 2782253 - | AraC family transcriptional regulator TERM 2893 2784135 - 2784121 - g 93 -4.2 -5.24129 | CGCGGGGAGAAAAAA TGACTG ATG CAGACA AGGGTCTCGGTAGAA TERM 2894 2785329 - 2785297 - g 75 -12 -3.51411 | gap 1, overlap 2785293 2785316 2785318 ATCTGCCGAAATCAA CGAGCGCGCTGCGCG AATA CATGCAGCGCG-TCG GCACGGAATCGAGCC Bphy_2477 2784120 - 2786411 + | hypothetical protein Bphy_2478 2786938 - 2787354 + | NUDIX hydrolase TERM 2895 2787413 - 2787390 - T 84 -13.1 -3.75153 | CTTGGGCAACGGAAA GCGCGGCAG ACTCTG CCGCCGCGC CCTCTCGAACACGAC Bphy_2479 2788363 - 2787431 - | UTP-glucose-1-phosphate uridylyltransferase TERM 2896 2787989 - 2788003 + g 71 -4.2 -4.56597 | opp_overlap 2787979, overlap 2787946 2787945 AATCACGGCGAACGG CTCGTC GCC GACCAG TTTTTCCGCGCAGAG Bphy_2480 2788554 - 2789618 + | AraC family transcriptional regulator TERM 2897 2789666 - 2789642 - f 70 -12.1 -2.70932 | GCCTGTCTCTAACGA GCCGTCGTGCA GCC CGCATGACGGC GAGCATGAGCTAATA TERM 2898 2789725 - 2789738 + F 70 -3.7 -4.56597 | overlap 2789709 GGCGCCAGTACGATC CGCCC TTTT GCGCG TTTTTGCGCGCACAC TERM 2899 2790143 - 2790181 + G 74 -13.1 -3.21416 | gap 1, overlap 2790179 GCCGCGCTCGCCTGC GCGTTCGC-GCCGAACGC CTGG GTGCTCGGCGGCGCACGC TTCGTGATGGGACTG Bphy_2481 2789759 - 2791249 + | major facilitator transporter TERM 2900 2791294 - 2791321 + F 100 -13.4 -4.4267 | CGTCGTTGTGACATC GGGGGTCTCCGG GCAA CGGGAGACCCTC TTTTGCATTTTGGCG Bphy_2482 2791430 - 2791873 + | hypothetical protein TERM 2901 2791975 - 2791994 + F 100 -15 -3.91144 | ATCGATGATTGCAGG CGGCGGCA ACTG TGCCGCCG TTTCTCGCATCTCGG Bphy_2483 2792166 - 2792978 + | MscS mechanosensitive ion channel TERM 2902 2793004 - 2793037 + T 71 -12.5 -2.55213 | gap 1, overlap 2793001 TCTCGATTCGTTGCG CGGGCATCCGT-CGAT TGC GTCGAACGAATGCCCG TGACTTGCGTGGGTC Bphy_2484 2793740 - 2793051 - | SNARE associated Golgi protein TERM 2903 2794168 - 2794150 - g 70 -11.6 -3.30159 | GGAACTGCTGGAGAA CGCGCTCG ACG CGGGCGCG ACGGCGCTGCGCATC TERM 2904 2794455 - 2794487 + G 74 -5.3 -4.46112 | opp_overlap 2794478 TCTCGCCGGCAGCGG GCACGCGCGGCACGA CGA TCGAAGTGCGCGAGC TTTATTTCAATACGC TERM 2905 2794742 - 2794788 + G 70 -5.7 -4.24342 | gap 2, opp_overlap 2794715, overlap 2794751 CTCGCCGTGTACGGC TGC-GCCGGCCTGC-CGACCGCG AGC CGCGGACGCGCGGATCAGCAGTA TTTCTTCGTCAACGG TERM 2906 2794751 - 2794786 + G 71 -9.6 -3.72374 | gap 1, opp_overlap 2794715, overlap 2794742 TACGGCTGCGCCGGC CTGCCGA-CCGCGAGCC GCG GACGCGCGGATCAGCAG TATTTCTTCGTCAAC TERM 2907 2795089 - 2795103 + G 76 -5.6 -4.56597 | opp_overlap 2795043 ACCGATGCCATCCGC GTCGCC CGT GTCGAC TTTTTCGACCGGCAC TERM 2908 2795665 - 2795651 - g 71 -10 -3.61398 | opp_overlap 2795635 GGCGTGGTCGAAGAA GAGCGT GAG ACGCTC GATGCGCTCGGCTTC Bphy_2485 2793941 - 2796016 + | DNA mismatch repair protein MutL Bphy_2486 2796051 - 2797004 + | tRNA delta(2)-isopentenylpyrophosphate transferase TERM 2909 2797419 - 2797385 - T 89 -15.9 -3.33261 | gap 2 CCGCAAGCTTTAGAA CGCTGGCAACGAGCATG GAT CA-GCTCGTTGCC-GCG TGGAGGACGGGGACG Bphy_2487 2798718 - 2797651 - | phosphoribosylformylglycinamidine cyclo-ligase Bphy_2488 2798816 - 2799892 + | hypothetical protein Bphy_2489 2799947 - 2800720 + | DnaA regulatory inactivator Hda Bphy_2490 2800713 - 2801399 + | HAD family hydrolase TERM 2910 2802482 - 2802457 - g 77 -12.5 -3.67597 | opp_overlap 2802468, overlap 2802459 GCTCGCATTGAACAA CACCGACGCGC GCGT GCGCGCCGGCA AGCCGGTATCGCCCG TERM 2911 2802480 - 2802459 - g 84 -15.1 -3.41988 | opp_overlap 2802468, overlap 2802457 TCGCATTGAACAACA CCGACGCGC GCGT GCGCGCCGG CAAGCCGGTATCGCC Bphy_2491 2801396 - 2803012 + | poly(A) polymerase Bphy_2492 2803061 - 2803651 + | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase TERM 2912 2804167 - 2804189 + G 80 -8.4 -4.39998 | GATGCGTACCTGCGT TCGCTGTGCG ACG CGTACAACGA TTTCTTCTATCACTA Bphy_2493 2803648 - 2804343 + | deoxynucleoside kinase TERM 2913 2804365 - 2804329 - f 88 -14.4 -3.53761 | opp_overlap 2804348 GAATTCTTTGTCAAA GGCGGCACGCTATAGC GTCCG GCTGCAGCGTGCGGCC GTATTACCAACGGAC TERM 2914 2804348 - 2804366 + F 71 -12.4 -3.01791 | opp_overlap 2804329 GCACGCTATAGCGTC CGGCTGCA GCG TGCGGCCG TATTACCAACGGACT Bphy_2494 2804386 - 2805201 + | 3-methyl-2-oxobutanoate hydroxymethyltransferase TERM 2915 2805212 - 2805231 + T 100 -15 -4.07568 | opp_overlap 2805207 TCTGATTCAAGCCGG GCGGCGCT TTCG AGCGCCGC TTTTCAGGACCGGGC Bphy_2495 2807170 - 2805305 - | para-aminobenzoate synthase, subunit I TERM 2916 2806316 - 2806276 - G 72 -8.3 -4.13945 | gap 2, overlap 2806277 AGCCGCAGGGGAAAA GC-GCGCGCA-GAACGTCG GCGAA CGACGTGCGTGGGCGCAGC ATCGCCGTCACTGTC TERM 2917 2806944 - 2806920 - G 100 -17.1 -5.64873 | opp_overlap 2806920 TCGAACAATAAAAAA CGCAGCGAGCC ACT GGCACGCTGCG TTTCCTGTTGCAAAG TERM 2918 2806920 - 2806944 + g 93 -17.1 -3.92324 | opp_overlap 2806920 TCGAACAATAAAAAA CGCAGCGAGCC ACT GGCACGCTGCG TTTCCTGTTGCAAAG TERM 2919 2807018 - 2806999 - G 70 -5.6 -4.24948 | overlap 2806970 2807002 GCACGACAGCGAAAA GACCGCTG TCGA CATCGGCC GACGCCGCGTCGCAC TERM 2920 2807123 - 2807094 - G 70 -14.3 -2.57463 | gap 1, overlap 2807093 AAGCCCGTGTATAAC CGGCTCGACCGGCG ACT CGC-GGTCGAGTCG CAGTCGTCCAGCAAC Bphy_2496 2808328 - 2807195 - | chaperone protein DnaJ TERM 2921 2808488 - 2808454 - R 93 -9.1 -4.77173 | opp_overlap 2808451, overlap 2808455 CCTCCATAAAACAAA TGTGCCCGGAGAGCC GGAAA GGCTCGCCAGGCGCG TGATCGGTTCAATCG TERM 2922 2808487 - 2808455 - R 79 -12.6 -3.45581 | opp_overlap 2808451, overlap 2808454 CTCCATAAAACAAAT GTGCCCGGAGAGCC GGAAA GGCTCGCCAGGCGC GTGATCGGTTCAATC Bphy_2497 2810545 - 2808584 - | chaperone protein DnaK Bphy_2498 2811131 - 2810700 - | putative thioredoxin protein TERM 2923 2810895 - 2810856 - G 78 -3.4 -4.96848 | gap 1, overlap 2810857 2810859 GTGGTGATAGAAAAA CCACGTC-GGCACGCCATG CAG CATGAAGCGCCTGCCGAGA TCGCGATGTTCATAG TERM 2924 2810966 - 2810925 - G 74 -10.8 -3.74251 | gap 1, opp_overlap 2810961 2810962, overlap 2810928 GACATTGCTATGAAA CCAGCGCAGGCGGAGCGCA CGGAT CGC-CTCCGGCTGCGCGAG CATCGCCTTCTTCGC TERM 2925 2810963 - 2810928 - G 71 -13.3 -2.96873 | gap 1, opp_overlap 2810961 2810962, overlap 2810925 ATTGCTATGAAACCA GCGCAGGCGGAGCGCA CGGAT CGC-CTCCGGCTGCGC GAGCATCGCCTTCTT Bphy_2499 2811756 - 2811148 - | GrpE protein TERM 2926 2811497 - 2811514 + g 80 -4.7 -4.78848 | overlap 2811498 TTCGCCACGTCTTCC TGACCGC GGCG GCGGACG TTTTCTGTTTCCGCC Bphy_2500 2812104 - 2812265 + | hypothetical protein Bphy_2501 2812686 - 2812237 - | RNA-binding S4 domain-containing protein Bphy_2502 2813799 - 2812729 - | ferrochelatase TERM 2927 2813833 - 2813812 - R 75 -9.3 -3.85256 | overlap 2813814 CATAGGCAAAGACAA GAGCCGCGC ACAG GCGCGACAC GTAATGGACGGGAAG TERM 2928 2813831 - 2813814 - R 71 -10.5 -3.50303 | overlap 2813812 TAGGCAAAGACAAGA GCCGCGC ACAG GCGCGAC ACGTAATGGACGGGA TERM 2929 2813940 - 2813913 - R 83 -7.7 -4.59773 | gap 1, opp_overlap 2813907 TGGCACGGCGAAAAA CGCCGCGCATGA TGAAC TCGT-CGCGGCG TTGCGCTGCTTCCGG Bphy_2503 2814976 - 2813957 - | heat-inducible transcription repressor HrcA Bphy_2504 2815259 - 2816161 + | ATP-NAD/AcoX kinase Bphy_2505 2816260 - 2817927 + | DNA repair protein RecN Bphy_2506 2820777 - 2817985 - | (glutamate--ammonia-ligase) adenylyltransferase TERM 2930 2820255 - 2820281 + g 71 -10 -3.58522 | opp_overlap 2820245 2820246 AGAAATCCTGCGTCG CGATGGACGACC GCT GGCCGCCCGTCG TTTCGCCATCGTCCT TERM 2931 2820564 - 2820574 + g 84 -8.2 -4.57837 | overlap 2820525 2820556 2820553 CTTCCGCGCGAAGCT GGCG CAG CGCC TTTTTCAGCGCGTCT TERM 2932 2822978 - 2822960 - g 78 -4.4 -4.77036 | overlap 2822962 TCGCACGATGAAAAA CGGCACGC CGA GCGTGTGG CCTGCGCTTGACGGC TERM 2933 2823197 - 2823179 - g 71 -10.2 -3.66018 | CGACTACGTGAACAA CAGCGCGC TCG GCGGGCTG GCCAAGCATCAGACG Bphy_2507 2820963 - 2825222 + | hypothetical protein TERM 2934 2825260 - 2825279 + F 71 -10.7 -3.53012 | overlap 2825259 CGCCGGCGCTACATG CAGCGCG GCATCG CGCGCTG TTTGCGAGCGCCCGA TERM 2935 2825735 - 2825697 - g 82 -16 -3.05463 | AGGCGCCCGAGGCAA CCCGCGTGCTGAACACGA CGC TCGTGTTCGACCCGCAGG GCAACGAGGCCGCGC TERM 2936 2826005 - 2825964 - g 70 -13.6 -2.64933 | overlap 2825985 CATTCACGTACACGA CGGGCCGCGCGCACTG GGAAACGCTG CTGCGCGCGCGGGCCG TCGAGAATCAGTGCT Bphy_2508 2825372 - 2826220 + | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase TERM 2937 2826542 - 2826578 + G 75 -14.4 -3.01924 | gap 1 CGACCAGGGCGTCGG CGTGCGCGCCGTGTCGG GCGA CCG-CACGGCGTTCGCG TATTCGGACGACCTG Bphy_2509 2826318 - 2827784 + | peptidase U62 modulator of DNA gyrase TERM 2938 2827827 - 2827841 + F 93 -11.4 -4.58395 | overlap 2827794 CGCGAGCGCCACTTG TGCGGG TTT CCCGCA TTTTTGCAGCCTGCA TERM 2939 2828045 - 2828027 - f 100 -11.7 -5.03747 | opp_overlap 2828027 AAATTCCCGAAAAAA CCGCCAG CGAGT CTGGCGG TTTTTTTTCGCCCTA TERM 2940 2828027 - 2828045 + F 100 -11.7 -5.76949 | opp_overlap 2828027 AAATTCCCGAAAAAA CCGCCAG CGAGT CTGGCGG TTTTTTTTCGCCCTA TERM 2941 2828479 - 2828460 - g 72 -3.4 -4.59773 | overlap 2828435 2828462 GTGTACTTCGAAAAA CCGCGCAC GACG GTGGGCTG GAAAGGCCTCATCAA Bphy_2510 2828166 - 2829239 + | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 2942 2829271 - 2829291 + T 100 -14 -5.42259 | TTCTACGCAGACTTC GCCCGGCT CACGC AGCCGGGC TTTTTTTGGCCATCC Bphy_2512 2830073 - 2829495 - | ATP--cobalamin adenosyltransferase Bphy_2513 2830227 - 2831684 + | FAD linked oxidase domain-containing protein Bphy_2514 2831749 - 2833254 + | D-lactate dehydrogenase (cytochrome) TERM 2943 2833265 - 2833293 + F 89 -16.7 -3.13432 | TCTGAGCACCGCACC GCGCCATGCCGCT GTT GGCTGCATGGCGC TTGCGTCGTCTTGCG Bphy_2515 2833415 - 2834503 + | FAD linked oxidase domain-containing protein TERM 2944 2835409 - 2835381 - g 71 -10.2 -3.63515 | gap 1, opp_overlap 2835381 2835382, overlap 2835382 CCGGACTTCGAAGAA GCGCTGACGCCGC TCAC GCGGCGCCGG-GC GATTCATACGGTTGC Bphy_2516 2834511 - 2835737 + | hypothetical protein TERM 2945 2835789 - 2835772 - f 79 -12.7 -3.28924 | CACGTTCGTGCACAA CCTGGCC GATC GGCCAGG TCGTGGCGCGCGGGC Bphy_2517 2835852 - 2836550 + | alanine racemase domain-containing protein Bphy_2518 2836565 - 2837380 + | pyrroline-5-carboxylate reductase Bphy_2519 2838340 - 2837477 - | 4-hydroxybenzoate polyprenyl transferase TERM 2946 2838449 - 2838424 - R 100 -12.5 -5.75538 | opp_overlap 2838424 GGCAAAAAACAAAAA GCCCGACGGGC CTTC ACCTGTCGGGC TTGTTCATCGGCGAC TERM 2947 2838424 - 2838449 + r 88 -14 -3.71848 | opp_overlap 2838424 GGCAAAAAACAAAAA GCCCGACGGG CCTTCA CCTGTCGGGC TTGTTCATCGGCGAC Bphy_2520 2838988 - 2838500 - | Ferritin Dps family protein TERM 2948 2839284 - 2839248 - R 71 -8 -4.08216 | opp_overlap 2839280 CGAGCTTCTGCAAAA GCATGGGAGT-CCGCACG TGT CGGGCGACACTCCC-CGC GTTGCCAGCTGCATT Bphy_2521 2840891 - 2839437 - | catalase TERM 2949 2839527 - 2839570 + g 75 -13.9 -3.01712 | gap 1, opp_overlap 2839540 GAAGTGCTCGATCTG TCGCGCGACGATATCGGCGG GCACG CCGTCGATCGC-TCGCGCGA TGTTGCCGAACAGAC TERM 2950 2841231 - 2841252 + r 80 -14.5 -2.78384 | CCGGTGGACGATGCA TCGACAGCC GCAC GGCTGTCGA TATCCTGCGGCAACA Bphy_2522 2842231 - 2841272 - | LysR family transcriptional regulator Bphy_2523 2844577 - 2842355 - | ATP-dependent DNA helicase RecG TERM 2951 2843333 - 2843368 + g 73 -6 -4.39414 | gap 1, overlap 2843332 GCCGATCACCAGTTG CGCAGTGCCGAGCGCCG CCG CTTCGATC-GCGCTGCG TTTCTCTTTCGTCTT TERM 2952 2843409 - 2843466 + g 71 -10.5 -3.64703 | gap 2, opp_overlap 2843388 2843402, overlap 2843410 GCAAGCCACGCGACC GTCACGCCGAGCGGCTCGAGC-C-AGC CGCGCA GCTTGCGCGCGTGCTGCTCGGCGAGAA TTTCGGTCGGCGCCA TERM 2953 2843410 - 2843465 + g 73 -14 -2.78679 | gap 2, opp_overlap 2843388 2843402, overlap 2843409 CAAGCCACGCGACCG TCACGCCGAGCGGCTCGAGC-C-AGC CGCGCA GCTTGCGCGCGTGCTGCTCGGCGAGA ATTTCGGTCGGCGCC TERM 2954 2844131 - 2844101 - G 74 -11.1 -3.63515 | gap 1 CTCCATGCCGAAGAA GCCGC-CGCGCACG TCGC CGCGCACGCGCAGC CGCACACCAACCGAC TERM 2955 2845781 - 2845752 - g 78 -10.7 -4.03234 | gap 1 TCGCGGGCATAGAAA CGATCCGCGCGGCG TAT CGTCACGCG-ATCG ACGGGCGTTACCGCT Bphy_2524 2844794 - 2845855 + | S-adenosylmethionine--tRNA-ribosyltransferase-isomerase TERM 2956 2846386 - 2846362 - g 80 -13.6 -3.33696 | opp_overlap 2846362 CGCGTCCCCAATCAA CGGCGACAAG CTGTT CCTGTCGCCG GAAGTGTCCATGCAG TERM 2957 2847084 - 2847063 - g 77 -11.5 -3.76968 | AACTGATGCAGGAAA TGCGCGACG CCAT CGACGCGCA GACCTTCGACGTATT Bphy_2525 2845940 - 2847142 + | queuine tRNA-ribosyltransferase TERM 2958 2847267 - 2847257 - f 74 -8.2 -4.25104 | GGCCCGTCAGGAAAA CCCG CTG CGGG TGCCGTCCCGTAAAT Bphy_2526 2847340 - 2847669 + | preprotein translocase, YajC subunit TERM 2959 2847681 - 2847712 + F 71 -12.2 -2.99319 | GTAAGGCCTGCTCTC TTGCGTCCGGCGCG GCCT CGCGCCGAGCGGAA TCTCTATCCGCGCTT Bphy_2527 2847790 - 2849835 + | protein-export membrane protein SecD TERM 2960 2850772 - 2850758 - g 70 -5.6 -4.32402 | GCTGAAGGAAAAGAA GGAACG CCA CGATCC GAACGATCCCAACGC Bphy_2528 2849853 - 2850803 + | protein-export membrane protein SecF TERM 2961 2850838 - 2850871 + T 100 -18.3 -2.80796 | opp_overlap 2850844, overlap 2850844 ACGTTGTTAGCACCA GAAAAAGGCCGGTTC AATC GAACCGGCCTTTGTC GTTTACATCATCGGC TERM 2962 2850865 - 2850844 - T 100 -15.9 -4.93296 | opp_overlap 2850838 2850844 TTAGCACCAGAAAAA GGCCGGTTC AATC GAACCGGCC TTTGTCGTTTACATC TERM 2963 2850844 - 2850865 + T 100 -15.9 -4.14725 | opp_overlap 2850844, overlap 2850838 TTAGCACCAGAAAAA GGCCGGTTC AATC GAACCGGCC TTTGTCGTTTACATC Bphy_2529 2852179 - 2850902 - | major facilitator transporter TERM 2964 2851606 - 2851595 - G 81 -3.6 -5.07486 | overlap 2851597 CAGGCCGAAGAAAAA CGGC ACGC GCCA GCCCCACGCGTTCAG TERM 2965 2852386 - 2852359 - R 100 -17.8 -5.80364 | gap 1, opp_overlap 2852359 ACGCCAATAAAAAAA CCGCTCCG-TCGC AAG GCGAACGGAGCGG TTTGTGCGGACCGGC TERM 2966 2852359 - 2852386 + r 100 -17.8 -3.85698 | gap 1, opp_overlap 2852359 ACGCCAATAAAAAAA CCGCTCCG-TCGC AAG GCGAACGGAGCGG TTTGTGCGGACCGGC Bphy_2530 2852994 - 2852425 - | YceI family protein Bphy_2531 2853610 - 2853047 - | YceI family protein TERM 2967 2853564 - 2853539 - G 72 -11.1 -3.54424 | gap 1 GTCGACTTGCGCAAA CG-CGCTGCCCG ACG CGGCCAGCGACG CCGCCGCGAACGCAG Bphy_2532 2854239 - 2853619 - | cytochrome B561 TERM 2968 2855297 - 2855273 - g 77 -12.7 -3.40299 | overlap 2855274 GCACGACAGCGATAA CGGCGAGCCCG GCA CGGGCGCGCCT GGCGTCGATGGTCCC TERM 2969 2855296 - 2855274 - g 77 -16.2 -2.63858 | overlap 2855273 CACGACAGCGATAAC GGCGAGCCCG GCA CGGGCGCGCC TGGCGTCGATGGTCC Bphy_2533 2854596 - 2855333 + | paraquat-inducible protein A TERM 2970 2855448 - 2855424 - g 75 -15 -2.70932 | CGTGCGCTCGAAGGA GCCGCAACGC TGCTC GCGCTGCGGC GCGGTCATGCACCGG Bphy_2534 2855341 - 2856015 + | paraquat-inducible protein A TERM 2971 2856394 - 2856418 + G 71 -12.1 -3.29144 | GCGCATCGGCGCGAG CGGCGTGTCGG GGC TCGGCACGCTG TTGTCGGGCGCGTAC TERM 2972 2857361 - 2857339 - g 75 -4 -4.61231 | overlap 2857341 CGATATTGCGAAAAA GCTCGATCAG GTG CCGTTCGACC AGATCGGCAAAAACC TERM 2973 2857393 - 2857375 - g 79 -6 -4.61231 | overlap 2857383 CCAGATCGGCAAAAA CCTCAACA CCG CGTTGAAG AACGCCGACCATCTC Bphy_2535 2856008 - 2857642 + | hypothetical protein TERM 2974 2858257 - 2858222 - g 71 -10.4 -3.65529 | AGATTTCGACGGAAA TCGGCGCCGCCG TGCGCAATCTGG CGGCGGTGCCGA CGCGCGGCGCGGCCG Bphy_2536 2857639 - 2858340 + | hypothetical protein Bphy_2537 2858472 - 2859749 + | putative RNA methylase TERM 2975 2859774 - 2859790 + F 100 -11.5 -5.45652 | opp_overlap 2859774 TTACCTCCACAAGAA GCGGGCG CCA TGCCCGC TTTTTTGTTGCACGT TERM 2976 2859790 - 2859774 - f 77 -10.8 -3.79906 | opp_overlap 2859774 TTACCTCCACAAGAA GCGGGC GCCAT GCCCGC TTTTTTGTTGCACGT Bphy_2538 2859921 - 2860304 + | glyoxalase/bleomycin resistance protein/dioxygenase Bphy_2539 2860388 - 2861074 + | helix-turn-helix type 11 domain-containing protein Bphy_2540 2861588 - 2861193 - | hypothetical protein TERM 2977 2861415 - 2861431 + g 75 -4.3 -4.60041 | overlap 2861374 GGGGCCGGTAGCGTC CGATGGC GGA GTCAACG TTTTTGCCAATGCCT Bphy_2541 2863215 - 2861764 - | NAD(P)(+) transhydrogenase (AB-specific) Bphy_2542 2863539 - 2863216 - | NAD/NADP transhydrogenase alpha subunit-like protein Bphy_2543 2864751 - 2863609 - | NAD(P)(+) transhydrogenase (AB-specific) TERM 2978 2864228 - 2864262 + g 74 -11.2 -3.57144 | opp_overlap 2864248 2864250 ATCGCCTGCAAGCCC GCCACGCCCGCGCCGA GAA TCAGCACGCGCGCGGC TTTCACCGTGCCCGC TERM 2979 2865167 - 2865123 - g 74 -11.4 -3.61398 | gap 1, overlap 2865128 CTGCTGGTTGAAGAA CACACGGCCGCCGGGCTGCGT CTGA AC-CAGCCCGCCGGGCATCTG GAAGTGGGCGAAACG Bphy_2544 2865042 - 2865539 + | NUDIX hydrolase Bphy_2545 2865583 - 2866737 + | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TERM 2980 2868106 - 2868092 - g 72 -11.4 -3.55563 | opp_overlap 2868091 2868090 2868086 2868083 AGGCGATGCTGGAAA CGGGCA TCC TGCCCG ACTTCATCGTTGTCG Bphy_2546 2867113 - 2868726 + | glutamate synthase (NADPH) TERM 2981 2868764 - 2868794 + T 100 -14 -4.44667 | opp_overlap 2868765, overlap 2868765 GATGCGCCATGAAAA ACGCGCGCTGGA CCTGACA TCCAGCGCGCGC TTTCTTGTTGGGCGA TERM 2982 2868765 - 2868793 + T 93 -17.5 -3.26318 | opp_overlap 2868765, overlap 2868764 ATGCGCCATGAAAAA CGCGCGCTGGA CCTGACA TCCAGCGCGCG CTTTCTTGTTGGGCG TERM 2983 2868793 - 2868765 - T 100 -18.2 -4.7254 | opp_overlap 2868765 2868764 ATGCGCCATGAAAAA CGCGCGCTGGAC CTGAC ATCCAGCGCGCG CTTTCTTGTTGGGCG Bphy_2547 2869572 - 2868817 - | peptidase M48 Ste24p TERM 2984 2869667 - 2869649 - R 86 -5.9 -5.07652 | opp_overlap 2869650, overlap 2869644 2869650 CGCCTGAAAAGAAAA GCGCCTG ACGGG CAGGCGT TTTTTTAACATGCAG TERM 2985 2869650 - 2869666 + r 100 -9.4 -5.44119 | opp_overlap 2869649 2869644 2869650 GCCTGAAAAGAAAAG CGCCTG ACGGG CAGGCG TTTTTTTAACATGCA TERM 2986 2869666 - 2869650 - R 72 -9.4 -3.63868 | opp_overlap 2869650, overlap 2869649 2869644 GCCTGAAAAGAAAAG CGCCTG ACGGG CAGGCG TTTTTTTAACATGCA Bphy_2548 2870390 - 2869782 - | glutathione S-transferase domain-containing protein TERM 2987 2871010 - 2871042 + G 71 -9.2 -3.75153 | CGTTTCGGTCCCGAC GGTGCGCG-CGAAGCC TTC GGTTTCGACGCG-GCC TTTGCGTTCGACGAA TERM 2988 2871757 - 2871770 + G 73 -9.5 -3.92869 | opp_overlap 2871757 GAGGTGATCGAAGAA CGCGC CTAC GCGCG TTTCTACATGCATCG Bphy_2549 2870551 - 2872095 + | peptidase M24 TERM 2989 2872643 - 2872612 - g 71 -10 -3.64703 | opp_overlap 2872612 2872626, overlap 2872613 TGCTGCCCATCGAAA GCGCGCACGTCACG CGCA CGTTGCGCACGCGC GTTCTGGTGAGCGCC TERM 2990 2872851 - 2872885 + G 74 -15 -2.57132 | gap 1, opp_overlap 2872869, overlap 2872850 TACGCGCTGGTCTGG TGCTGCGCGCCGCAC GAAGCG GCGCGGCGCGC-GCA ATTGTCGGACGAAGA Bphy_2550 2872119 - 2873339 + | UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase TERM 2991 2873715 - 2873705 - g 70 -4.6 -4.4267 | overlap 2873710 GTGGAAAAGCGAAAA GACG ATG CGCC GCGCCAATCACACGG TERM 2992 2874232 - 2874258 + G 71 -7.9 -4.08216 | gap 1, overlap 2874237 ACGCAATCATGATCG GCCGTGCGGCGC AGGG GCGCCCC-TGGC TTTTCCGCGAGATCG Bphy_2551 2873535 - 2874608 + | NifR3 family TIM-barrel protein TERM 2993 2874752 - 2874722 - g 81 -7.6 -4.56597 | gap 1, opp_overlap 2874740, overlap 2874723 2874724 TCGTGCGTCGAAAAA CCG-CTGCTCGAG GTGGTG CTCGAGCAGGCCG GCGGCAACCAGTCGC Bphy_2552 2874605 - 2874838 + | Fis family transcriptional regulator Bphy_2553 2874883 - 2876448 + | phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase TERM 2994 2876473 - 2876501 + F 100 -24.7 -4.83759 | CTGCTTGTTCCGCAA CGGCCCGGCAGTT TGC AACTGCCGGGCCG TTTTTGCATTTGATT Bphy_2554 2876555 - 2877097 + | crossover junction endodeoxyribonuclease RuvC Bphy_2555 2877742 - 2877110 - | lysine exporter protein LysE/YggA Bphy_2556 2877902 - 2878483 + | Holliday junction DNA helicase RuvA TERM 2995 2878541 - 2878558 + F 76 -12.7 -3.05844 | TTTCCTGCGCGACAC CCTGGCC GTTC GGCCAGG TCTTCGAATGGGCCA Bphy_2557 2878566 - 2879657 + | Holliday junction DNA helicase RuvB Bphy_2558 2880382 - 2879711 - | phosphoglycerate mutase Bphy_2559 2880865 - 2880407 - | D-tyrosyl-tRNA(Tyr) deacylase Bphy_2560 2882207 - 2880909 - | tyrosyl-tRNA synthetase TERM 2996 2881362 - 2881380 + g 70 -6 -4.21194 | GATGCTCATTAGCTT GCCGAA CATGTCA TTCGGC TTTTCGCTGATACCG TERM 2997 2882281 - 2882298 + H 79 -12.7 -3.41051 | CTCGGCGCCGCGCAC CCTGGCC GATC GGCCAGG TTGTGATGCAACTCG Bphy_2561 2882379 - 2883515 + | hypothetical protein TERM 2998 2883548 - 2883533 - T 100 -11.8 -5.72622 | opp_overlap 2883533 CGCACAAATAAAAAA CGGGGC CGAA GCCCCG TTTTGCCGCCACTGA TERM 2999 2883533 - 2883548 + T 86 -11.8 -4.08216 | opp_overlap 2883533 CGCACAAATAAAAAA CGGGGC CGAA GCCCCG TTTTGCCGCCACTGA Bphy_2562 2883958 - 2883593 - | iron-sulfur cluster assembly accessory protein TERM 3000 2884124 - 2884089 - R 74 -14 -2.52676 | gap 1 CAGTGGTGTAAGCGA TGTCTCCG-TCCGCCCG CGA CGGGCGGACCGCGGACA CGAAAACAAACAAAA TERM 3001 2884183 - 2884158 - R 100 -11.7 -4.81249 | opp_overlap 2884158 GCGGAAATGCAAAAA GCCGCCTTCGC ATCT GCGTTGGCGGC TTTTTGCTACAGGCC TERM 3002 2884158 - 2884183 + r 100 -11.7 -4.72272 | opp_overlap 2884158 GCGGAAATGCAAAAA GCCGCCTTCGC ATCT GCGTTGGCGGC TTTTTGCTACAGGCC Bphy_2563 2884620 - 2884228 - | ribosomal protein S9 Bphy_2564 2885117 - 2884632 - | ribosomal protein L13 TERM 3003 2885266 - 2885246 - H 100 -12.6 -5.58454 | opp_overlap 2885246 GCCAGACGAAAAAAA GCCCGAAC TAGCG GTTCGGGC TTAATCCACCTTAGG TERM 3004 2885246 - 2885266 + H 79 -13.3 -3.16742 | opp_overlap 2885246 GCCAGACGAAAAAAA GCCCGAACT AGC GGTTCGGGC TTAATCCACCTTAGG Bphy_2565 2885661 - 2886083 + | OsmC family protein TERM 3005 2886108 - 2886147 + T 100 -21.6 -3.53012 | opp_overlap 2886115, overlap 2886115 CGAGCCAAGCGCAGC TGGAAAATGCCGGCGTCC CAAC GGACGCCGGCATTTGTCA TTTGAGCGGCAAAGC TERM 3006 2886140 - 2886115 - T 100 -20.5 -4.11394 | opp_overlap 2886108 2886115 AGCGCAGCTGGAAAA TGCCGGCGTCC CAAC GGACGCCGGCA TTTGTCATTTGAGCG TERM 3007 2886115 - 2886140 + T 100 -20.5 -4.13654 | opp_overlap 2886115, overlap 2886108 AGCGCAGCTGGAAAA TGCCGGCGTCC CAAC GGACGCCGGCA TTTGTCATTTGAGCG TERM 3008 2886373 - 2886393 + T 74 -11.1 -3.61268 | overlap 2886358 GCGTCGCCGCAGCCG CGGTGCGCT CTT ACCGCACCG TTTCACCCTTACCTG Bphy_2566 2887446 - 2886481 - | hypothetical protein Bphy_2567 2888527 - 2887463 - | dihydroorotase, homodimeric type TERM 3009 2888980 - 2888938 - g 89 -4.9 -5.17576 | gap 2 GATCAAGTCAAAAAA CACGAT-TGCCCATA-TCCGC AAG GCGACGCAAGGGCATATCGTG CTCGAGAACTGCCAC Bphy_2568 2888720 - 2889625 + | glutamine amidotransferase class-II Bphy_2569 2890178 - 2889684 - | hypothetical protein TERM 3010 2890400 - 2890421 + r 77 -10.1 -3.84406 | opp_overlap 2890401, overlap 2890401 2890420 TTGGCGTGAAAAAAA AGCCGCTTC CGAA GAAGCGGCC TTCTTGTGATCGAAG TERM 3011 2890420 - 2890401 - R 100 -13.6 -5.75342 | opp_overlap 2890400 2890401 TGGCGTGAAAAAAAA GCCGCTTC CGAA GAAGCGGC CTTCTTGTGATCGAA TERM 3012 2890401 - 2890420 + r 77 -13.6 -2.90322 | opp_overlap 2890401, overlap 2890400 TGGCGTGAAAAAAAA GCCGCTTC CGAA GAAGCGGC CTTCTTGTGATCGAA Bphy_2570 2891169 - 2890444 - | ABC transporter related Bphy_2571 2891843 - 2891166 - | polar amino acid ABC transporter, inner membrane subunit TERM 3013 2891445 - 2891457 + g 73 -9.1 -3.90112 | ATAGCTCATGCCGAG CGCGT ACG ACGCG TTTACTTGCCCGCGC Bphy_2572 2892583 - 2891843 - | polar amino acid ABC transporter, inner membrane subunit TERM 3014 2892635 - 2892604 - R 100 -13.8 -5.09204 | opp_overlap 2892608 AGACTCCAACAAAAA GAAACGGAAGAAGC GCCT GCCCCTTCCGTTCC GTTCAACACGTTGAC Bphy_2573 2893565 - 2892672 - | extracellular solute-binding protein TERM 3015 2893160 - 2893192 + g 78 -15.8 -2.73875 | gap 1, overlap 2893157 TGACGCCCGAATCCT TCTTCGTCATCAGGC GCGT GCC-GATGACGAAGA TCGTGTTCGAGAACG TERM 3016 2893717 - 2893742 + r 87 -9.7 -4.62471 | overlap 2893712 AGCGACTTTACCGGT CGATGCAAACG TCAT CGGTTGCGTCG TTTTTGCCGGTTCCG TERM 3017 2893818 - 2893792 - R 100 -18 -5.09426 | opp_overlap 2893789 2893809 TTCAATTGCAAAAAA GCGGACGGCACC CGA AGTGCCGCCCGC CCGGTATTTTGCGCG TERM 3018 2893873 - 2893859 - R 70 -4.2 -4.56775 | opp_overlap 2893868, overlap 2893860 ATCGCGCTGGAAAAA CGCC GTTGCCT GGCG CCGCGTCCGCGACGG TERM 3019 2893868 - 2893895 + r 95 -17.8 -3.60234 | gap 1, opp_overlap 2893859 2893860, overlap 2893887 GAAAAACGCCGTTGC CTGGCGCCGCGTC CGC GACG-GGCGCCAG TTTCGCCCTGTATCG TERM 3020 2893921 - 2893954 + r 71 -10.3 -3.55622 | gap 1, opp_overlap 2893917, overlap 2893922 TATCGGATATACGCG GGCGCGTCCATGTATC AGG GATACA-GGCCGCGCA TTTCACGCGCTTGAA TERM 3021 2893922 - 2893953 + r 76 -13.8 -2.73159 | gap 1, opp_overlap 2893917, overlap 2893921 ATCGGATATACGCGG GCGCGTCCATGTATC AGG GATACA-GGCCGCGC ATTTCACGCGCTTGA Bphy_2574 2895227 - 2893935 - | Glu/Leu/Phe/Val dehydrogenase TERM 3022 2895291 - 2895272 - R 87 -4.2 -5.41143 | CATTGTCGAAAAAAA GCGCTGGA TGGG TCCAATGC CGTTTGGTCATCCGG Bphy_2575 2896347 - 2895391 - | LysR family transcriptional regulator Bphy_2576 2896525 - 2897913 + | adenylosuccinate lyase Bphy_2577 2898572 - 2898078 - | carbohydrate kinase Bphy_2578 2899944 - 2898583 - | gluconate transporter TERM 3023 2900156 - 2900117 - R 100 -23 -5.72622 | gap 1, opp_overlap 2900117 GCTACAAATAAAAAA CCCCGCCGCTTCAGCC-CG TTT CGAGGCTAAAGCGGCGAGG TTTGCTGACGCACAT TERM 3024 2900117 - 2900156 + r 100 -18.6 -3.72695 | gap 1, opp_overlap 2900117 GCTACAAATAAAAAA CCCCGCCGCTTCAGCC-CG TTT CGAGGCTAAAGCGGCGAGG TTTGCTGACGCACAT TERM 3025 2900172 - 2900199 + r 79 -13.4 -3.08679 | opp_overlap 2900189 TTTGCTGACGCACAT TGCGCGCTGCGT CAAA ACGCGGCGCGGA TCTTCAATGCGCCGG Bphy_2579 2900844 - 2900203 - | 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase Bphy_2580 2902774 - 2900861 - | 6-phosphogluconate dehydratase Bphy_2581 2903074 - 2903910 + | RpiR family transcriptional regulator TERM 3026 2903987 - 2903957 - T 87 -16.2 -2.91593 | opp_overlap 2903958 2903963, overlap 2903963 CATGGCTGCATAAAT GCAAAACGGGCTCC GTC GGAGCCCGTTTCGT TTTGAAGCGTACTGC TERM 3027 2903958 - 2903986 + T 100 -17.5 -4.10161 | opp_overlap 2903957 2903963, overlap 2903963 ATGGCTGCATAAATG CAAAACGGGCTCC GTC GGAGCCCGTTTCG TTTTGAAGCGTACTG TERM 3028 2903963 - 2903981 + T 100 -16 -4.19735 | opp_overlap 2903957 2903963, overlap 2903958 TGCATAAATGCAAAA CGGGCTCC GTC GGAGCCCG TTTCGTTTTGAAGCG TERM 3029 2903981 - 2903963 - T 100 -16 -4.39571 | opp_overlap 2903963 2903958, overlap 2903957 TGCATAAATGCAAAA CGGGCTCC GTC GGAGCCCG TTTCGTTTTGAAGCG Bphy_2582 2917223 - 2904069 - | YadA domain-containing protein TERM 3030 2907306 - 2907330 + g 82 -15.7 -3.14211 | CACGTTCACCGCATC CGTGGCTGCCG AAC CCGCAGCCACG TTCGTCACGCGACGT TERM 3031 2907819 - 2907843 + g 82 -15.7 -3.14211 | CACGTTCACCGCATC CGTGGCTGCCG AAC CCGCAGCCACG TTCGTCACGCGACGT TERM 3032 2912730 - 2912754 + g 82 -15.7 -3.14211 | CACGTTCACCGCGTC CGTGGCTGCCG AAC CCGCAGCCACG TTCGTCACGCGACGT Bphy_2583 2918090 - 2921062 + | YadA domain-containing protein TERM 3033 2921157 - 2921114 - T 100 -23.4 -3.44051 | opp_overlap 2921121, overlap 2921121 GCCCGACGACCAGAA GCACAAAGCCCGGTTTGCTG TTTC CAGCAAACCGGGCTTTTTAC ATGCGCTTCGCGAAT TERM 3034 2921150 - 2921121 - T 100 -22.3 -4.11281 | opp_overlap 2921121, overlap 2921114 GACCAGAAGCACAAA GCCCGGTTTGCTG TTTC CAGCAAACCGGGC TTTTTACATGCGCTT TERM 3035 2921121 - 2921150 + T 100 -22.3 -4.67011 | opp_overlap 2921121 2921114 GACCAGAAGCACAAA GCCCGGTTTGCTG TTTC CAGCAAACCGGGC TTTTTACATGCGCTT Bphy_2584 2921608 - 2921186 - | hypothetical protein Bphy_2585 2922906 - 2921635 - | gamma-glutamyl phosphate reductase TERM 3036 2923058 - 2923030 - R 70 -4.3 -4.59109 | overlap 2923032 CACAGGCCGGAAAAA CCGCCGAGCCCCG CAT CGGGACGTGACCG GCCGGTTGCGCGCGC Bphy_2586 2924256 - 2923129 - | DNA polymerase III, delta subunit TERM 3037 2923157 - 2923193 + g 71 -13 -3.01712 | gap 2 CGTAACGGCGCGCTT CGCGCTGACGGCGCCCGT CCG ACCGGCGCCG-C-GTGCG TCTTCGGCGCCGGCG TERM 3038 2923449 - 2923428 - G 71 -7.3 -4.18018 | gap 1 GGTTTTCACGCAAAA GCATGGCAAG CGG CTTGCC-CGC ATCGACGCCGCGCTT TERM 3039 2924090 - 2924043 - G 80 -14.3 -3.34398 | gap 3, overlap 2924041 GCCGGTCGCCAAACA GCGACATCGACTGG--CTCGC-GC CGA GCAGCGAGCTCCAGTCGAAGCCGC GCTCCACCGTGAACA Bphy_2587 2924850 - 2924299 - | rare lipoprotein B Bphy_2588 2927485 - 2924891 - | leucyl-tRNA synthetase TERM 3040 2925409 - 2925426 + g 71 -7.7 -4.08485 | gap 1, opp_overlap 2925408, overlap 2925409 2925405 CGGCGTCGAATGGAG C-GCGCTC GGT GAGCGCAG TTTCGTTTGCCTGAC TERM 3041 2925639 - 2925679 + g 95 -16.2 -3.99592 | gap 1, overlap 2925670 2925674 CCGCCGAGCACGACG GGCTGCCC-GTCGGCGT TCAGCGTC GCGCCGACCGGGCGGCC TTTGTCGTCGTGCGT TERM 3042 2926578 - 2926565 - G 88 -2.3 -5.24531 | opp_overlap 2926570 ATGCGTGACAAAAAA GCCTG TGGC CATGC CCTTCTTTTCCATCG Bphy_2589 2928209 - 2927733 - | biopolymer transport protein ExbD/TolR Bphy_2590 2929018 - 2928266 - | MotA/TolQ/ExbB proton channel TERM 3043 2928813 - 2928790 - G 77 -11.8 -3.64716 | gap 1, overlap 2928788 CCAGCGGGGAAAAGA TGCGT-TCGCG ATC CGCGAGACGCA GTGTCGCCACGCCTT TERM 3044 2928871 - 2928854 - G 80 -14.1 -3.35679 | CGGCGCCAGCCAGAA CCGCGCG ACAG CGCGCGG CCCTTGCCGCTTGGC Bphy_2591 2929878 - 2929081 - | dihydrodipicolinate reductase TERM 3045 2929167 - 2929141 - G 80 -13.6 -3.33696 | GTGGCCTTCAAGGAA GCGCACCGCGCG CAA CGCGCCTTGCGC GTACGACAGACGGCT TERM 3046 2929994 - 2930026 + r 100 -20 -3.01712 | opp_overlap 2929953 TCGCTGCGAGACGCA TGATGGGTGGCCGA CGGAA TCGGCCGCCCATCA TGTTACGGACAACGG Bphy_2592 2930937 - 2930044 - | SmpA/OmlA domain-containing protein TERM 3047 2931385 - 2931372 - g 78 -8.1 -4.35524 | CCCCGAAATCGAAAA TCGCC AGCA GGCGA TCGCGAAAGAACGCG Bphy_2593 2931049 - 2931477 + | ferric uptake regulator family protein TERM 3048 2931535 - 2931495 - T 100 -20 -3.72324 | gap 1, opp_overlap 2931495 2931502, overlap 2931502 CATTTTCAGTAAGAA GCAGAAAGGCCCGGCTGAT GAGA ATCAACCGGGCCTTT-TGC TTTCCCTCGCTTACC TERM 3049 2931495 - 2931535 + T 100 -17.8 -3.68619 | gap 1, opp_overlap 2931495 2931502, overlap 2931502 CATTTTCAGTAAGAA GCAGAAAGGCCCGGCTGAT GAGA ATCAACCGGGCCTTT-TGC TTTCCCTCGCTTACC TERM 3050 2931502 - 2931529 + T 100 -15.6 -4.56914 | opp_overlap 2931495 2931502, overlap 2931495 AGTAAGAAGCAGAAA GGCCCGGCTGAT GAGA ATCAACCGGGCC TTTTGCTTTCCCTCG TERM 3051 2931529 - 2931502 - T 100 -17.8 -4.14859 | opp_overlap 2931502 2931495, overlap 2931495 AGTAAGAAGCAGAAA GGCCCGGCTGAT GAGA ATCAACCGGGCC TTTTGCTTTCCCTCG Bphy_2594 2932080 - 2931568 - | ureidoglycolate hydrolase Bphy_2595 2933121 - 2932111 - | allantoicase TERM 3052 2933193 - 2933165 - R 100 -15.9 -3.6682 | overlap 2933166 TGCGATTGAGTTAAA TGGCGGCGGACCG TCG CGGTCCGCCGCGT TGCCACTGGTGGTCG TERM 3053 2933192 - 2933166 - R 100 -19.4 -2.79878 | overlap 2933165 GCGATTGAGTTAAAT GGCGGCGGACCG TCG CGGTCCGCCGCG TTGCCACTGGTGGTC Bphy_2596 2934558 - 2933230 - | sodium:dicarboxylate symporter TERM 3054 2934866 - 2934818 - g 87 -7.4 -4.79223 | gap 1, overlap 2934820 CGAGATCATGAAAAA CGTCCCGCATACCGTCACTGACG CTGC CATC-GCGACGATCCGCGAGAGG ATCGAAGGCGGCGCT Bphy_2597 2934810 - 2935502 + | GntR domain-containing protein TERM 3055 2935532 - 2935548 + T 74 -2.1 -5.00884 | GACGCAGTCGCCATT CCGGGGT TTC GCTGCGG TTTTTTCGCGGGCAT TERM 3056 2935555 - 2935568 + T 72 -9.5 -3.76226 | TCGCTGCGGTTTTTT CGCGG GCAT CCGCG TTGTGTTATCGGGTT TERM 3057 2935680 - 2935661 - T 100 -9.2 -6.30182 | overlap 2935675 GCAGACAAAAAAAAA GGCCGCCC AAAC GAGCGACC TTCCCGCTGAGGCGA Bphy_2598 2936714 - 2935704 - | glyceraldehyde-3-phosphate dehydrogenase, type I TERM 3058 2936088 - 2936126 + g 71 -11.8 -3.21416 | gap 1 GCCCGTCTTCGTCGG GATCTG-GCTGTGCGTG GCCGAG CGCGCACGGCGCAGGTC TTCGTGGTACACGTC TERM 3059 2936819 - 2936797 - R 81 -12.6 -3.53012 | GCGCGCCGCCCGAAA CGCGGCGCGC ACG ACGCGCTGCG CGCCTTAGCCGAGTG Bphy_2599 2938842 - 2936824 - | transketolase TERM 3060 2937787 - 2937811 + g 81 -11.3 -4.08216 | opp_overlap 2937802, overlap 2937788 TTCAGCGCGCTCGTT CGCGCCGGCGA TAA TCGCCTGCGCC TTTTCCGCCCAGTCG TERM 3061 2937788 - 2937810 + g 80 -14.8 -3.04715 | opp_overlap 2937802, overlap 2937787 TCAGCGCGCTCGTTC GCGCCGGCGA TAA TCGCCTGCGC CTTTTCCGCCCAGTC Bphy_2600 2939452 - 2939865 + | glyoxalase/bleomycin resistance protein/dioxygenase TERM 3062 2940212 - 2940260 + G 70 -11.6 -3.33696 | gap 1, overlap 2940213 GTGCCGCTCACCACG ACTCGCAGCGTCGTGCG-GCTCG CCGG CGAGCGCGCGCAACGCCGCCAGG TTCATTGGCAGCGGA TERM 3063 2940213 - 2940259 + G 74 -15.1 -2.60075 | gap 1, overlap 2940212 TGCCGCTCACCACGA CTCGCAGCGTCGTGCG-GCTCG CCGG CGAGCGCGCGCAACGCCGCCAG GTTCATTGGCAGCGG Bphy_2601 2939870 - 2940625 + | hypothetical protein TERM 3064 2940674 - 2940704 + T 100 -15.4 -5.45652 | opp_overlap 2940678, overlap 2940678 GCCCGACTGAAATGC AAAAGGCCCGCCTG TTT CCGGCGGGCCTTTC TTTTTTATTGCAGAT TERM 3065 2940700 - 2940678 - T 100 -16.2 -4.36595 | opp_overlap 2940674 2940678 GACTGAAATGCAAAA GGCCCGCCTG TTT CCGGCGGGCC TTTCTTTTTTATTGC TERM 3066 2940678 - 2940700 + T 100 -16.2 -5.20735 | opp_overlap 2940678, overlap 2940674 GACTGAAATGCAAAA GGCCCGCCTG TTT CCGGCGGGCC TTTCTTTTTTATTGC Bphy_2602 2941309 - 2940749 - | hypothetical protein Bphy_2603 2941727 - 2941326 - | guanine-specific ribonuclease N1 and T1 TERM 3067 2941693 - 2941660 - G 78 -4.3 -4.72272 | overlap 2941661 2941670 GCGCCTGACGAAAAA CCGCCGACAAGACCG CCGA CCGTCAAGGCGGCGA TCAGCACGCCGTCGC TERM 3068 2942030 - 2942052 + r 100 -16.3 -5.75342 | CAGCCATTGCTCGAA GGCGTGCCC ATTGC GGGCACGCC TTTTTTTTGCCCGCG Bphy_2604 2944402 - 2942108 - | malate dehydrogenase TERM 3069 2942624 - 2942608 - G 76 -2.1 -4.9218 | overlap 2942609 TATCGACGAGAAAAA TCTGGCG ATT CGGCAGC ACGAGCGCATTCATC TERM 3070 2945113 - 2945084 - g 75 -12.1 -3.53012 | gap 1, opp_overlap 2945096 CGGTGCCGCCGCAAA CGGCGCTGCGCCGC GAC GCCGCGCAAC-CCG GCGACGATATCTGGA Bphy_2605 2944654 - 2945649 + | thiamine-monophosphate kinase TERM 3071 2945765 - 2945818 + G 100 -20.3 -3.24747 | gap 3, overlap 2945765 2945769 GAAGCTGGCCCGAAC G-GCGC-GCCGCGCGGC-CAGCCGCG CGCGC CGCGGCCGCGCCGCGCGACTGCGCGC TTCATGCTGTCACAC TERM 3072 2945765 - 2945817 + G 91 -20.5 -2.54634 | gap 2, overlap 2945765 2945769 GAAGCTGGCCCGAAC GGCGC-GCCGCGCGGC-CAGCCGCG CGCGC CGCGGCCGCGCCGCGCGACTGCGCG CTTCATGCTGTCACA TERM 3073 2945879 - 2945901 + G 72 -9 -4.1822 | AGCGGCCTTTCGCCC GTCGCGCCCG GCA CGGTCGGGAC TTTGTTCGCGTGGGC Bphy_2606 2945639 - 2946280 + | phosphatidylglycerophosphatase A Bphy_2607 2946320 - 2946820 + | CinA domain-containing protein TERM 3074 2946921 - 2946939 + G 76 -5.9 -4.56597 | CCGCTTCGACCTTCA GCCGCAT CCCGA AGGCGGC TTTTTCCGCGAAACG Bphy_2608 2946871 - 2947383 + | hypothetical protein TERM 3075 2947411 - 2947429 + T 76 -13.2 -3.16564 | opp_overlap 2947409, overlap 2947390 2947390 2947394 CGTGACGCAACGAGC CGCGTTTC AGA GAAACGCG TTGATGCGCTCGCGC Bphy_2609 2948232 - 2947417 - | orotidine 5'-phosphate decarboxylase Bphy_2610 2949414 - 2948356 - | aldose 1-epimerase Bphy_2611 2950548 - 2949619 - | SMP-30/gluconolaconase/LRE domain-containing protein Bphy_2612 2951345 - 2950545 - | short-chain dehydrogenase/reductase SDR TERM 3076 2951121 - 2951170 + g 74 -10.6 -3.78022 | gap 1, opp_overlap 2951121 2951120 2951118 GACATACAGGAAGAG CGGCTTGTGACGCGAATCGCCGA GCTGG TCGGCGAG-CGCGTCGCCCGGCG TTTCGTCGATGTCGA Bphy_2613 2952413 - 2951397 - | monosaccharide-transporting ATPase TERM 3077 2951952 - 2951912 - G 71 -13.9 -2.78463 | opp_overlap 2951907 2951934, overlap 2951898 2951939 2951943 2951944 ACGTGTCCGACGACA CGCCCACGGCCTGACCGTG CGA CACGATGAAGCCGAGGCCG CGCACGATTTCCATC Bphy_2614 2954025 - 2952511 - | ABC transporter related TERM 3078 2953815 - 2953828 + g 72 -6.7 -4.2828 | opp_overlap 2953801, overlap 2953811 ACGCGCCCGCATTCG CGAAG CGCA CTTCG TTTTCGTCGATCAGC Bphy_2615 2955107 - 2954109 - | monosaccharide-transporting ATPase TERM 3079 2954475 - 2954487 + g 70 -5.5 -4.24204 | overlap 2954476 CAGCGCGATATTCGC TGCGT TGA ACGCG TTTTCCGTGTCCGTC Bphy_2616 2956069 - 2955293 - | short-chain dehydrogenase/reductase SDR TERM 3080 2955443 - 2955493 + g 71 -12.5 -3.30038 | overlap 2955440 CAGGTCGAGCGTCGC CTGCTTCGCGGC-GGCGGGATCGGC CTG GCCG-TCCCACCAGTCGCGCGTCAG TTGCGTTTCGATGTA Bphy_2617 2956746 - 2956066 - | KDPG and KHG aldolase Bphy_2618 2957839 - 2956799 - | 2-keto-3-deoxy-galactonokinase Bphy_2619 2958789 - 2957836 - | IclR family transcriptional regulator TERM 3081 2958939 - 2958978 + H 100 -14.2 -3.89614 | gap 1, overlap 2958940 GTCTCCAATATTCGT C-CCGCTTCTGCGACGCGC ATT GCGCGACGGCGAAGCGGTG TTTCTGCCCGTTACG TERM 3082 2958940 - 2958976 + H 95 -17.9 -3.5362 | overlap 2958939 TCTCCAATATTCGTC CCGCTTCTGCGACGCGC ATT GCGCGACGGCGAAGCGG TGTTTCTGCCCGTTA Bphy_2620 2959327 - 2959839 + | OmpA domain-containing protein TERM 3083 2959887 - 2959861 - T 100 -15.3 -5.32944 | opp_overlap 2959861 TTCAGAAGCAAAAAA CGGCGATTATC TGCAC GATAATCGCCG TTTCGATTTGCGCCG TERM 3084 2959861 - 2959887 + T 100 -15.3 -3.84451 | opp_overlap 2959861 TTCAGAAGCAAAAAA CGGCGATTATC TGCAC GATAATCGCCG TTTCGATTTGCGCCG Bphy_2621 2960655 - 2959915 - | monofunctional biosynthetic peptidoglycan transglycosylase Bphy_2622 2961577 - 2960705 - | shikimate 5-dehydrogenase TERM 3085 2961550 - 2961560 + g 70 -4.6 -4.41494 | TCACCGCATATTTGT CGCG CGG CGTG TTTTGATTCGAGCTC Bphy_2623 2963679 - 2961574 - | ribonuclease II TERM 3086 2961713 - 2961731 + g 75 -7.4 -4.2461 | overlap 2961721 2961724 TCGCTTTCGGCGGAT TCGTCGGC GGC GTCGATGA TTTCTTCGTCGACCT TERM 3087 2963063 - 2963044 - G 78 -10.7 -4.0492 | GAATTCCGACAGAAA GCGCGCT TCGTGC AGCGCGC GGGCGGACGGAATGC Bphy_2624 2964408 - 2963806 - | hypothetical protein Bphy_2625 2965814 - 2964405 - | UDP-N-acetylmuramate TERM 3088 2965823 - 2965838 + H 74 -8.2 -4.18018 | TGTGCATAAAGCTGT CGCGCC GCAA GGCGTG TTTTGCGTGGAAAGA Bphy_2626 2966029 - 2966682 + | hypothetical protein Bphy_2627 2966709 - 2967257 + | redoxin domain-containing protein Bphy_2628 2967452 - 2967916 + | 3-dehydroquinate dehydratase, type II Bphy_2629 2967985 - 2968455 + | acetyl-CoA carboxylase, biotin carboxyl carrier protein TERM 3089 2969937 - 2969911 - g 71 -7.8 -4.12188 | overlap 2969912 CCATTACCTCGAAAA CCGGCTGGCCGC GAA GCTGCAAGCCGC ACCGGAAGAAGCGTA Bphy_2630 2968568 - 2969953 + | acetyl-CoA carboxylase, biotin carboxylase TERM 3090 2970355 - 2970308 - g 88 -15.6 -3.32963 | gap 1 ATTCCGATCGGAGAA CGCATCTGGGTCGTGC-CATCGT GGC ACGATGCGCCCGATCCGGACGCG CTCGTGCTCGAACTC Bphy_2631 2969957 - 2970859 + | ribosomal protein L11 methyltransferase TERM 3091 2971190 - 2971158 - g 86 -14.9 -3.54459 | overlap 2971138 CGAATGGCGCTCAAA CGCC-GGCGCCGGGC GCGCA GCCC-GCGCCTGGCG AGCGCGTCGCCGCCG TERM 3092 2971928 - 2971918 - g 72 -8.2 -4.07568 | opp_overlap 2971917 GCCGTCGCGCGAAAA GCCC AAC GGGC CTGCATTCGCAGCCG Bphy_2632 2970929 - 2972656 + | Zinc finger-domain-containing protein TERM 3093 2973179 - 2973169 - g 72 -6.8 -4.2828 | overlap 2973170 CGTCATCGACGAAAA CGAC AAG GTCG TGCATGCCGAACTCG Bphy_2633 2972750 - 2973250 + | redoxin domain-containing protein TERM 3094 2973273 - 2973304 + F 100 -22.4 -3.62096 | gap 1, opp_overlap 2973273, overlap 2973294 CTTCGCGTCGATATA GCGCCGCGCCCGTAT CGC AT-CGGGCGCGGCGC TTTCACATCGTCGCG TERM 3095 2973304 - 2973273 - f 100 -22.4 -2.87132 | gap 1, opp_overlap 2973273 2973294 CTTCGCGTCGATATA GCGCCGCGCCCGTAT CGC AT-CGGGCGCGGCGC TTTCACATCGTCGCG TERM 3096 2973294 - 2973322 + F 100 -13.8 -5.14563 | opp_overlap 2973273, overlap 2973273 CGCCCGTATCGCATC GGGCGCGGCGCT TTCAC ATCGTCGCGCCC TTTTTTCCTCCGACC Bphy_2634 2973360 - 2974304 + | ribokinase-like domain-containing protein TERM 3097 2974359 - 2974376 + F 73 -12.7 -2.75844 | overlap 2974358 CCGTTCGGGTTTGGA GGGCTCG ATTA CGAGCCC GTTTGGAGTCAAAGG Bphy_2635 2974393 - 2974881 + | 17 kDa surface antigen TERM 3098 2974935 - 2974958 + T 100 -10.3 -5.93809 | GTCGGCAACCTCACA CGCATGCGC TCCCCT GTGCATGCG TTTTTTTTGTCCGGC TERM 3099 2975058 - 2975031 - T 100 -20.6 -5.55664 | opp_overlap 2975026 CCACGACGAAAAAAA TCCCGCCGCCAG TAAA CCGGCGGCGGGA TCAGATGTGATCGAG Bphy_2636 2975743 - 2975129 - | hypothetical protein TERM 3100 2975294 - 2975315 + g 71 -4.3 -4.56597 | overlap 2975283 2975286 2975292 2975307 CTTCGCAGGCGCAGC GGCCGCC TTCTTCGC GGCAGCC TTTTTCGCAGGCGCA TERM 3101 2975325 - 2975348 + g 76 -5.9 -4.56597 | gap 1, overlap 2975307 2975339 GCAGCCTTTTTCGCA GGC-GCAGCC TTTTT GGCGGCAGCC TTTTTAGCAGGCGCC Bphy_2637 2976100 - 2975774 - | hypothetical protein TERM 3102 2975846 - 2975802 - G 81 -11.4 -4.07885 | gap 1, opp_overlap 2975801 2975805 CACCCTTCGTCAAAA CCCGCTTC-CCGCGGACGC TTCTCACG GCGGCCACTGCGAAGCGGG CTATTCATCGGCGTA TERM 3103 2975975 - 2975998 + g 100 -12.4 -4.56597 | overlap 2975972 2975971 CAATCGTTTGATCGA GCCGCTCGCT TTAT AGCGAACGGC TTTTTCCGGGGGGAA Bphy_2638 2977403 - 2976180 - | ribonucleoside-diphosphate reductase Bphy_2639 2981008 - 2978015 - | ribonucleoside-diphosphate reductase, alpha subunit TERM 3104 2981234 - 2981252 + r 72 -4.4 -4.66163 | opp_overlap 2981237 CACCGGTTGCTCTAA CCAGTTGC GCC GCATCAGG TTTTTCAGTGCCGGT Bphy_2640 2982133 - 2981495 - | N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD Bphy_2641 2982444 - 2982130 - | hypothetical protein Bphy_2642 2983394 - 2982450 - | cytochrome c assembly protein TERM 3105 2982516 - 2982489 - G 77 -5.4 -4.65933 | overlap 2982512 CACCTCGAAAACAAA GCGGCTGCCGAC ATAC GCAAGCAGCAGC GCGACGAACGACGCG TERM 3106 2982563 - 2982525 - G 72 -13 -3.15861 | overlap 2982512 2982528 CAGCAGCGCGACGAA CGACGCGAGCACCCAGCG CAA CGCCGCGCGCCCACGCCA GCCCGACACCTTGCG Bphy_2643 2983475 - 2984842 + | signal recognition particle protein Bphy_2644 2984997 - 2985548 + | phosphoribosyltransferase TERM 3107 2985611 - 2985582 - T 86 -12.3 -4.09243 | opp_overlap 2985589, overlap 2985589 TACAGCGCTGCAAAA TAAAAAAGCGACC TGCG GGTCGCTTTTTTG TTGGCCGGATGGCCA TERM 3108 2985604 - 2985589 - T 100 -10.4 -5.79595 | opp_overlap 2985589, overlap 2985582 CTGCAAAATAAAAAA GCGACC TGCG GGTCGC TTTTTTGTTGGCCGG TERM 3109 2985589 - 2985604 + T 100 -10.4 -5.4505 | opp_overlap 2985589 2985582 CTGCAAAATAAAAAA GCGACC TGCG GGTCGC TTTTTTGTTGGCCGG Bphy_2645 2986236 - 2985631 - | multiple antibiotic resistance (MarC)-related protein Bphy_2646 2987985 - 2986249 - | prolyl-tRNA synthetase TERM 3110 2987040 - 2986999 - G 71 -13.8 -2.70932 | opp_overlap 2987034 CGGCGTGCCGAACCA CTCGACGATTTCCTCTTC CGTCGC GAAGCGGAATTCGCCGAG GCCCGGCAGCTTGTT TERM 3111 2988024 - 2988002 - H 71 -6.9 -4.12198 | gap 1, overlap 2988003 CAGAATTTTCCAAAA GCGGCGGACC AAAG GGACCGCC-C GAAAGGGGTAAGACG Bphy_2647 2988267 - 2988962 + | NUDIX hydrolase TERM 3112 2988989 - 2989021 + F 95 -17.7 -3.53811 | opp_overlap 2989009, overlap 2988990 TGTCCACGCCGCATC TGCCGGTGCGGCGTG AGA TACGCTGCGCCGGCG TTTCGAGGGAATCAC TERM 3113 2988990 - 2989020 + F 100 -19 -2.72144 | opp_overlap 2989009, overlap 2988989 GTCCACGCCGCATCT GCCGGTGCGGCGTG AGA TACGCTGCGCCGGC GTTTCGAGGGAATCA Bphy_2648 2989038 - 2989616 + | CNP1-like protein of unknown function TERM 3114 2989651 - 2989675 + T 100 -11.4 -5.0925 | opp_overlap 2989651, overlap 2989631 CAGCGGCAACAAAAA GCCGTCCCAT CGTTT ACGGGACGGC TTTTTGATTTTCGAC TERM 3115 2989675 - 2989651 - T 100 -13.6 -5.07486 | opp_overlap 2989631 2989651 CAGCGGCAACAAAAA GCCGTCCCAT CGTTT ACGGGACGGC TTTTTGATTTTCGAC Bphy_2649 2990823 - 2989705 - | glutamate 5-kinase TERM 3116 2990394 - 2990404 + g 79 -6.8 -4.46615 | overlap 2990390 TGATCTCATCGGTCA CGAC AGT GTCG TTTTCGTTAATGATG Bphy_2650 2992013 - 2990901 - | GTP-binding protein Obg/CgtA TERM 3117 2992145 - 2992167 + r 100 -14.8 -5.1101 | opp_overlap 2992145 CGCCGCAAACAAAAA GGCCCCGCAA ACT TCGCGGGGCC TTTTTTCGGTCCTGA TERM 3118 2992167 - 2992145 - R 100 -17 -5.27335 | opp_overlap 2992145 CGCCGCAAACAAAAA GGCCCCGCAA ACT TCGCGGGGCC TTTTTTCGGTCCTGA Bphy_2651 2992462 - 2992202 - | ribosomal protein L27 Bphy_2652 2992798 - 2992487 - | ribosomal protein L21 TERM 3119 2992749 - 2992779 + g 74 -2.4 -4.83169 | overlap 2992774 ACTTTAAGTTTTTCG CCGACAGCAACC TTGTACT GCTTGCCGCCGG TTTTTATGACCGCGT TERM 3120 2992944 - 2992927 - H 82 -10.5 -4.15044 | CCCGTGCGTAACAAA CCGCGCG AAAC CACGCGG AAACGGACCGAAACC Bphy_2653 2993037 - 2994029 + | polyprenyl synthetase TERM 3121 2994173 - 2994187 + F 100 -9.2 -5.86965 | opp_overlap 2994173 GATTCTTCAAAAAAA CCGTGC ACT GCGCGG TTTTTTTTCGTCCGT TERM 3122 2994187 - 2994173 - f 95 -7 -5.41143 | opp_overlap 2994173 GATTCTTCAAAAAAA CCGTGC ACT GCGCGG TTTTTTTTCGTCCGT Bphy_2654 2994406 - 2995623 + | hypothetical protein Bphy_2655 2995672 - 2996970 + | type II secretion system protein E TERM 3123 2997300 - 2997269 - g 80 -14.4 -3.3482 | gap 1, opp_overlap 2997296, overlap 2997251 2997257 CAACGCGCGAACCAA GGGCATGC-CGCGCA TCG TGCGCGCGCTCGCCC GCGACATAACGGCAG Bphy_2656 2996967 - 2998190 + | type II secretion system protein Bphy_2657 2998222 - 2999151 + | prepilin peptidase Bphy_2658 2999155 - 2999757 + | dephospho-CoA kinase Bphy_2659 2999953 - 3000708 + | hypothetical protein Bphy_2660 3000768 - 3000962 + | hypothetical protein TERM 3124 3000979 - 3000937 - T 76 -13.3 -2.82933 | overlap 3000939 3000950 CGCCAACCGACGACA CACCCGGCGAACACCGCTC GCACT GAACGGCGACCGCAGGGCG TTGCACATCGAAAAA TERM 3125 3000977 - 3000939 - T 71 -12.3 -2.9627 | overlap 3000937 3000950 CCAACCGACGACACA CCCGGCGAACACCGCTC GCACT GAACGGCGACCGCAGGG CGTTGCACATCGAAA TERM 3126 3001007 - 3000995 - T 72 -4.7 -4.70659 | opp_overlap 3000995, overlap 3000996 TTGCACATCGAAAAA GGCGG AAG CCGCA TACGGCGATTCCTCC Bphy_2661 3001472 - 3001029 - | NUDIX hydrolase Bphy_2662 3002338 - 3001469 - | hypothetical protein Bphy_2663 3003620 - 3002379 - | arginine biosynthesis bifunctional protein ArgJ TERM 3127 3003662 - 3003645 - R 84 -12.7 -3.70902 | CTGTCGAGACTGAAA TGCCGGC GGAC GCCGGCA TTGGGGATCAAGGGT TERM 3128 3003765 - 3003734 - R 91 -16.6 -3.5594 | gap 1, opp_overlap 3003737 3003738 3003762, overlap 3003722 3003737 AATGCACGCTTCAAA CGACG-CGGCGCGCA TGA TGCGCGCCGCCTTCG TGTGTCACGCAATCT TERM 3129 3003737 - 3003761 + r 90 -17.1 -3.32022 | opp_overlap 3003722 3003734 3003737, overlap 3003738 GCACGCTTCAAACGA CGCGGCGCGCA TGA TGCGCGCCGCC TTCGTGTGTCACGCA TERM 3130 3003761 - 3003737 - R 88 -17.1 -2.91144 | opp_overlap 3003737 3003738, overlap 3003722 3003734 GCACGCTTCAAACGA CGCGGCGCGCA TGA TGCGCGCCGCC TTCGTGTGTCACGCA TERM 3131 3003738 - 3003760 + r 100 -20.6 -2.58999 | opp_overlap 3003722 3003737 3003734, overlap 3003737 CACGCTTCAAACGAC GCGGCGCGCA TGA TGCGCGCCGC CTTCGTGTGTCACGC Bphy_2664 3006580 - 3003770 - | preprotein translocase, SecA subunit TERM 3132 3004147 - 3004157 + g 80 -4.6 -4.84359 | CTTCGCGCTTGTATT CCTG CTT CGGG TTTTTCTGCGCGTAG TERM 3133 3004932 - 3004960 + g 89 -5.1 -5.1356 | overlap 3004933 TGCAGCGTCTGCCAC TCGTCGTGCAACT TCT GGATGCGCGGCGC TTTTTCTTCCTCGGG TERM 3134 3007308 - 3007288 - g 72 -8.2 -4.07568 | overlap 3007291 CCGGCGCGTGCAAAA GAGGCGCG CATGT CGCGCGTC GGCGCCGATGCACTG Bphy_2665 3006859 - 3007401 + | hypothetical protein TERM 3135 3007434 - 3007451 + T 85 -9.8 -4.46615 | opp_overlap 3007434, overlap 3007429 GCACCACATGAAAAA GCGGCC CGTACA GGCCGC TTTTCGTTGCTGCTC TERM 3136 3007451 - 3007434 - T 95 -10.5 -4.82667 | opp_overlap 3007429 3007434 GCACCACATGAAAAA GCGGCCC GTAC AGGCCGC TTTTCGTTGCTGCTC Bphy_2666 3008407 - 3007490 - | UDP-3-0-acyl N-acetylglucosamine deacetylase TERM 3137 3008099 - 3008081 - G 70 -5.9 -4.24745 | GATCAGGAACACAAA GGACGCC GCGCT GCCGTCC ATGATGGGGATTTCT TERM 3138 3008432 - 3008443 + r 86 -4.4 -5.30155 | opp_overlap 3008432 CTATTCGATTGAAAA TCCT AATC AGGA TTTTTTAATTCATAG Bphy_2667 3009186 - 3008677 - | redoxin domain-containing protein Bphy_2668 3010616 - 3009423 - | cell division protein FtsZ Bphy_2669 3011970 - 3010738 - | cell division protein FtsA TERM 3139 3011806 - 3011829 + g 81 -3.1 -5.03747 | gap 1 GATGGACTGCACCGT GGCCTCGATG TTCAC CA-CGACGCC TTTTTTGAGCCCTTT Bphy_2670 3012750 - 3011998 - | polypeptide-transport-associated domain-containing protein TERM 3140 3012402 - 3012430 + g 84 -13.2 -3.71284 | CGTCGGTGCTCACCA GCTGATCGGTAC CCCAT GTGCCGATCGGC TTGTATTCCTCCAGC TERM 3141 3012715 - 3012697 - G 74 -13.2 -3.23692 | overlap 3012700 CAGCACGAGCAGCAA CAACGCGT GCA ACGCGTTG GCGGCGAGGTTGAGC TERM 3142 3012712 - 3012700 - G 71 -9.1 -3.75738 | overlap 3012697 CACGAGCAGCAACAA CGCGT GCA ACGCG TTGGCGGCGAGGTTG Bphy_2671 3013707 - 3012766 - | D-alanine--D-alanine ligase Bphy_2672 3015098 - 3013704 - | UDP-N-acetylmuramate--alanine ligase Bphy_2673 3016216 - 3015095 - | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase Bphy_2674 3017496 - 3016213 - | cell division protein FtsW TERM 3143 3016856 - 3016818 - G 83 -14.6 -3.23853 | overlap 3016816 3016852 CGCCGCCAAGGAACA GCACGCCCATCGCGATCG CCG CGATCACCATGAACGCGC CCATATCGGGTTCGA Bphy_2675 3019007 - 3017493 - | UDP-N-acetylmuramoylalanine--D-glutamate ligase TERM 3144 3017626 - 3017651 + g 81 -13.3 -3.62597 | gap 1, opp_overlap 3017606, overlap 3017632 3017633 3017636 GCGTCGCCCGGTTGC GCGACG-GCGCT CGC GGCGCGCGTCGC TTCTTCGAGCGTGGC Bphy_2676 3020237 - 3019068 - | phospho-N-acetylmuramoyl-pentapeptide-transferase TERM 3145 3019129 - 3019144 + g 70 -4.6 -4.41348 | opp_overlap 3019129, overlap 3019125 GTGATGATCCAGAAG CGCACG ACCA CCTGCG TTTCTTTCCAGCCCG Bphy_2677 3021667 - 3020255 - | UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase TERM 3146 3020282 - 3020325 + g 75 -7.4 -4.25104 | gap 1, overlap 3020256 3020255 3020287 3020314 GGGCGCCGTGCCCGG TGCAGCGGGTTGTGGAC-TCG TAA CGGCGTCCACCACGCGTTCCA TTTTCATGAAGCGCG Bphy_2678 3023202 - 3021664 - | UDP-N-acetylmuramyl-tripeptide synthetase TERM 3147 3022041 - 3022082 + g 72 -8.6 -4.15222 | gap 2, opp_overlap 3022038, overlap 3022042 ACATGCAGATCAGCT TGCCG-CCCCGC-GCGTCCG CGAT CGGGCGCAGCGCGGTCAGCG TTTGTTCAAGCGCGT TERM 3148 3023153 - 3023114 - G 75 -12 -3.53444 | opp_overlap 3023107, overlap 3023115 3023151 CTATCGGCGTGCAAA TGTGCGCCTGGCTGCGCA TGCG CGCGCAGCCAGGCAAGCG CTTCAGCAATCTGCT TERM 3149 3023152 - 3023115 - G 78 -15.5 -2.71924 | opp_overlap 3023107, overlap 3023114 3023151 TATCGGCGTGCAAAT GTGCGCCTGGCTGCGCA TGCG CGCGCAGCCAGGCAAGC GCTTCAGCAATCTGC Bphy_2679 3025073 - 3023199 - | peptidoglycan glycosyltransferase Bphy_2680 3025420 - 3025070 - | cell division protein FtsL Bphy_2681 3026370 - 3025417 - | S-adenosyl-methyltransferase MraW Bphy_2682 3026715 - 3026386 - | hypothetical protein TERM 3150 3026442 - 3026456 + g 70 -7.8 -3.9941 | ACATCGCTTCCTGTT CCTGCG CGT CGTAGG TTTCCTTGTCCCAGA TERM 3151 3026943 - 3026975 + r 76 -3.3 -4.93877 | opp_overlap 3026934 3026943, overlap 3026938 3026944 3026953 GAGTAACCCCCAACA CCGGTCAAGGGAGCG GCG CGCTTTTTTCGCCGA TTTTGTTTGCTAGAA TERM 3152 3026953 - 3026963 + r 77 -2.4 -5.03747 | opp_overlap 3026943, overlap 3026944 3026943 3026938 CAACACCGGTCAAGG GAGC GGC GCGC TTTTTTCGCCGATTT Bphy_2683 3027778 - 3027215 - | hypothetical protein Bphy_2684 3028136 - 3029344 + | porin TERM 3153 3029373 - 3029390 + T 100 -12.7 -5.5112 | CGTAGTAACCCTCGA GGGCGTC TTCG GACGCCC TTTTTTATTGGTGCG TERM 3154 3029472 - 3029435 - T 100 -25.1 -3.88787 | opp_overlap 3029435 3029438, overlap 3029438 CGATACCCGCACAAA GAATACGGCCCAACGGT CTAC ACCGTCGGGCCGTATTC TTTGCGCGAGCTGCG TERM 3155 3029435 - 3029472 + T 100 -22.9 -3.53811 | opp_overlap 3029435 3029438, overlap 3029438 CGATACCCGCACAAA GAATACGGCCCAACGGT CTAC ACCGTCGGGCCGTATTC TTTGCGCGAGCTGCG TERM 3156 3029469 - 3029438 - T 100 -21 -4.07133 | opp_overlap 3029435 3029438, overlap 3029435 TACCCGCACAAAGAA TACGGCCCAACGGT CTAC ACCGTCGGGCCGTA TTCTTTGCGCGAGCT TERM 3157 3029438 - 3029469 + T 100 -18.8 -3.90922 | opp_overlap 3029438 3029435, overlap 3029435 TACCCGCACAAAGAA TACGGCCCAACGGT CTAC ACCGTCGGGCCGTA TTCTTTGCGCGAGCT Bphy_2685 3031222 - 3029549 - | AMP-dependent synthetase and ligase TERM 3158 3031132 - 3031101 - G 81 -9.4 -4.26188 | gap 1, opp_overlap 3031102 3031105, overlap 3031094 CCCATACACGCAAAA GCGGGCTTCGCGCGA TTG TCGCG-GAAGCTCTC CTCGAGCAACGAGGT Bphy_2686 3033475 - 3031397 - | molybdopterin oxidoreductase TERM 3159 3033007 - 3032990 - G 71 -4.1 -4.56597 | GCTCTCGGCGAAAAA CTCGG TGTGCATG CCGAG ACTCGCGCCATACGT Bphy_2687 3033648 - 3034841 + | amidohydrolase TERM 3160 3035087 - 3035052 - T 100 -17.6 -3.89822 | CATCGACCGCACAAA CGCCAAGACCCCGC TTTTGAGG GCGGGGTCATGGCG ATGGATAAGGAGCCT TERM 3161 3037738 - 3037749 + T 71 -7.2 -4.2354 | AGGATCTGTTTCACT CCCC TCCC GGGG TTCTTTTCGCCTTTC TERM 3162 3040778 - 3040803 + T 89 -6.7 -5.03145 | opp_overlap 3040764 AGAGCGGAATTCTAG GCGCTCGCGTG AGCA CTTGCAAGCGC TTTTTTGACGAGTTC Bphy_2688 3041597 - 3040821 - | enoyl-CoA hydratase/isomerase Bphy_2689 3041734 - 3043425 + | phenylacetic acid degradation protein paaN Bphy_2690 3043567 - 3044769 + | beta-ketoadipyl CoA thiolase TERM 3163 3044954 - 3044994 + G 100 -17.6 -4.08767 | gap 1, opp_overlap 3044927 ACGAAGTCGAGGCCT CCCGTGCGCGTGCCCTCGT GCTG ACGGGGGCAGGC-CGCGGG TTTTGCGCCGGTCAG TERM 3164 3045588 - 3045576 - g 79 -10.5 -4.18018 | CGCGTTCATCGAAAA GCGCG CAC CGCGC TTCGAGGGCCGCTGA Bphy_2691 3044812 - 3045603 + | phenylacetate degradation, enoyl-CoA hydratase paaB Bphy_2692 3045605 - 3046066 + | phenylacetic acid degradation protein PaaD TERM 3165 3046199 - 3046178 - g 85 -12.3 -4.1899 | gap 1 CGATCCGATCGAAAA GGCGAGC-CG CGA CGAGCTCGCC GGGCTTCAACTCGAA Bphy_2693 3046143 - 3047447 + | phenylacetate-CoA ligase TERM 3166 3047520 - 3047481 - T 100 -20.8 -4.82901 | opp_overlap 3047486, overlap 3047482 GCCGGCTGACAAAAA CGAAAGCCCGACGGCGGT GATG ACAGCCGTCGGGCTTTCC AGTTCAGGCAACGGC TERM 3167 3047519 - 3047482 - T 100 -24.3 -3.49419 | opp_overlap 3047486, overlap 3047481 CCGGCTGACAAAAAC GAAAGCCCGACGGCGGT GATG ACAGCCGTCGGGCTTTC CAGTTCAGGCAACGG TERM 3168 3047486 - 3047515 + T 100 -19.3 -3.66178 | opp_overlap 3047482 3047481 CTGACAAAAACGAAA GCCCGACGGCGGT GATG ACAGCCGTCGGGC TTTCCAGTTCAGGCA Bphy_2694 3048796 - 3047564 - | MltA domain-containing protein TERM 3169 3047901 - 3047891 - G 74 -4.6 -4.57073 | overlap 3047893 CATCTCGCGGAAAAA CACG AAG CGCG GATTCGTATCGAGCA Bphy_2695 3049289 - 3048915 - | ApaG domain-containing protein TERM 3170 3049516 - 3049528 + H 87 -7.7 -4.8048 | opp_overlap 3049461 CGGCGCGCCACCCAG CGCTA AAA TAGCG TTTTTCGTCTCCCGC Bphy_2696 3049556 - 3050239 + | ribulose-phosphate 3-epimerase Bphy_2697 3050241 - 3050963 + | phosphoglycolate phosphatase TERM 3171 3052313 - 3052271 - g 75 -7.7 -4.25104 | overlap 3052272 3052280 CGTGCGTCAGGAAAA GCGCAACGA-CGACCGCATCG TCA CGATCCGGCCGCTCGCGG-GC ACGCGTCCGCGTGGC TERM 3172 3052838 - 3052817 - g 88 -13.7 -3.8397 | gap 1 AGAGACGGAGAACAA GGCGCGC-GC CGT GCTGCGCGCC GCCGAGCAGGTCCAA Bphy_2698 3051384 - 3052877 + | anthranilate synthase component I Bphy_2699 3052890 - 3053477 + | glutamine amidotransferase of anthranilate synthase TERM 3173 3053470 - 3053458 - f 71 -6.9 -4.17023 | overlap 3053438 TGAAGCAGTCGAAAA CCGCG GCA CGCAG CGCCTGAATATAAGA TERM 3174 3053676 - 3053648 - g 81 -3 -5.00616 | gap 1, opp_overlap 3053659, overlap 3053650 3053664 CTGCGCGTCAAAAAA GAGACCATCGGCG AAAT CACCG-CGGCCGC CACGGTGATGCGTGA TERM 3175 3053684 - 3053664 - g 81 -13.3 -3.5627 | opp_overlap 3053659, overlap 3053650 3053648 AGACCATCGGCGAAA TCACCGCGG CCG CCACGGTGA TGCGTGAGTTCGCGC TERM 3176 3054009 - 3053991 - g 72 -11.7 -3.44284 | overlap 3053989 CCGCGATGAAGAACA TCGCGCC CGTGC GGCGCGA ACTCGGCGTGCGGAC Bphy_2700 3053498 - 3054526 + | anthranilate phosphoribosyltransferase Bphy_2701 3054545 - 3055330 + | indole-3-glycerol-phosphate synthase TERM 3177 3055538 - 3055517 - g 76 -9.3 -4.07568 | overlap 3055474 TCGCGCGCGCGAAAA GCGCGGTGC GCGT GCGCCGCAC GCCGGACGGCTGGCT TERM 3178 3055840 - 3055830 - g 72 -8.2 -4.11216 | CGTGGACGGTGAAAA GCGC CGC GCGC CGATCTGCGAGATCG Bphy_2702 3055360 - 3055995 + | adenylate cyclase TERM 3179 3056032 - 3056063 + F 75 -10.2 -3.72893 | opp_overlap 3056015 GGCGGCGAGCGTGCA CGCGAACGCG AGGAACCTTGAG CGCGTTCGCG TTTGCTGCCACACTA Bphy_2703 3056086 - 3056898 + | uracil-DNA glycosylase TERM 3180 3056985 - 3056937 - T 74 -6 -4.4767 | opp_overlap 3056944 3056949, overlap 3056949 CGACCGATCAGAAAA TCCAAAGAAGAACGCCACGGAA TCGTG TTCCGTGGCGTTGTATTTTGCC GTCGCGATTCAGCCG TERM 3181 3056944 - 3056978 + T 90 -12.2 -4.13945 | opp_overlap 3056937 3056949, overlap 3056949 TCAGAAAATCCAAAG AAGAACGCCACGGAAT CGT GTTCCGTGGCGTTGTA TTTTGCCGTCGCGAT TERM 3182 3056949 - 3056973 + T 100 -16.5 -3.96506 | opp_overlap 3056937 3056949, overlap 3056944 AAATCCAAAGAAGAA CGCCACGGAAT CGT GTTCCGTGGCG TTGTATTTTGCCGTC TERM 3183 3056973 - 3056949 - T 100 -15.8 -4.13254 | opp_overlap 3056949 3056944, overlap 3056937 AAATCCAAAGAAGAA CGCCACGGAA TCGTG TTCCGTGGCG TTGTATTTTGCCGTC Bphy_2704 3057650 - 3057054 - | NAD(P)H dehydrogenase (quinone) TERM 3184 3057780 - 3057724 - R 75 -5.8 -4.56597 | gap 1, opp_overlap 3057727 3057729, overlap 3057727 3057728 CCCGTCCGGGAAAAA GTACCGCGGCGGCGACGGATTGTTGCA ACGA TAGAACAATCCGCCGTCGC-GCTTTGC CTGATGGACGGTGAG TERM 3185 3057729 - 3057775 + r 81 -11.7 -3.68351 | gap 2, opp_overlap 3057728 3057727 3057724, overlap 3057727 CCGGGAAAAAGTACC GCGGCGGCGACGGATTGTTGCAA CGA TAG-AACAATCCGCCGTCGC-GC TTTGCCTGATGGACG Bphy_2705 3059660 - 3057867 - | peptidase M61 domain-containing protein TERM 3186 3059734 - 3059708 - R 82 -10.8 -4.14392 | opp_overlap 3059712, overlap 3059710 3059712 TCGGAAGGCTCAAAA CACAGGAGGCGC CTC GCGCCTCCTTTC AACAACGTTCAGACG TERM 3187 3059732 - 3059710 - R 88 -13.4 -3.67 | opp_overlap 3059712, overlap 3059708 3059712 GGAAGGCTCAAAACA CAGGAGGCGC CTC GCGCCTCCTT TCAACAACGTTCAGA TERM 3188 3059730 - 3059712 - R 89 -16 -3.41023 | opp_overlap 3059712, overlap 3059710 3059708 AAGGCTCAAAACACA GGAGGCGC CTC GCGCCTCC TTTCAACAACGTTCA TERM 3189 3059712 - 3059730 + r 90 -16 -3.54459 | opp_overlap 3059712 3059710 3059708 AAGGCTCAAAACACA GGAGGCGC CTC GCGCCTCC TTTCAACAACGTTCA Bphy_2706 3060486 - 3059761 - | putative thiol-disulfide interchange protein, DsbC Bphy_2707 3061822 - 3060650 - | UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase TERM 3190 3061835 - 3061881 + H 71 -12.8 -2.69647 | opp_overlap 3061835, overlap 3061844 CATCCGGGCATTATA GCCGCGAGGGGTGGCGGGGACG GAT CGGCTCCGCCGTCTTTCGGGGG TAGTCTGGCTTTGTT TERM 3191 3061844 - 3061872 + H 77 -12.3 -3.5627 | opp_overlap 3061835, overlap 3061835 ATTATAGCCGCGAGG GGTGGCGGGGACG GAT CGGCTCCGCCGTC TTTCGGGGGTAGTCT Bphy_2708 3062226 - 3063320 + | GTP-binding protein YchF TERM 3192 3063377 - 3063394 + F 100 -9.8 -5.81032 | opp_overlap 3063376 CGCACAGCACATCAG GCCGCG CTACGA CGCGGC TTTTTTTTCGCCTTC Bphy_2709 3063592 - 3064917 + | extracellular solute-binding protein Bphy_2710 3065017 - 3065901 + | binding-protein-dependent transport systems inner membrane component Bphy_2711 3065898 - 3066743 + | binding-protein-dependent transport systems inner membrane component TERM 3193 3067430 - 3067454 + G 81 -12.1 -3.89346 | CGAAGTTTATGAGCG GCCTGCGACGA CGT TCGTGGCGGGC TTTATCGGCTCACCG TERM 3194 3067792 - 3067804 + G 73 -9.1 -3.93262 | TGCTGTCGGCCGCCT TGCCG GTG CGGCA TTTGCATTTCTTCGA Bphy_2712 3066756 - 3067847 + | ABC transporter related TERM 3195 3067948 - 3067933 - f 74 -8.2 -4.18018 | overlap 3067934 GGGCCGCAGGCAAAA CCGGCG ACTG CGCCGA GACAAAAAGCGAGAA Bphy_2713 3068066 - 3069733 + | ABC transporter related Bphy_2714 3069956 - 3071098 + | hypothetical protein Bphy_2715 3071751 - 3071128 - | HAD family hydrolase Bphy_2716 3072299 - 3071748 - | isochorismatase hydrolase TERM 3196 3072117 - 3072142 + g 80 -15.5 -2.82516 | gap 1, opp_overlap 3072087 CCACGGGTCGCTGCC GCG-TGCGAGCG GTC CGCTCGCACCGC TCTCGTGCTGCACGA TERM 3197 3072393 - 3072341 - R 71 -10.5 -3.53012 | gap 2, opp_overlap 3072344 3072352 3072379, overlap 3072342 TCTTCCTGCCGCAAA GCTGGCAGCATCGAGCGAGCCGCCG TTTCG CGGCGGCTCG-TCAGCGCGGCCT-C ATACCGGCTGCGTAC Bphy_2717 3074206 - 3072392 - | peptidase M24 TERM 3198 3072876 - 3072850 - G 70 -14.4 -2.52896 | overlap 3072835 GCATCGGCGAACGGA TGCCGCGCGGGA ACT TCGCGCGCGACA GCGCCATCGTGCCCT TERM 3199 3073118 - 3073141 + g 74 -2.4 -4.75372 | gap 1, opp_overlap 3073112, overlap 3073115 CGTAACGAAGCCCGC CTGGC-GCG CACGCGC CGCCGTCAG TTTTTCGTCGATGGT TERM 3200 3074032 - 3074004 - G 77 -12.4 -3.60074 | overlap 3073996 3073995 CACAAACCGGCGAAA TCGGCCGTCACG ACCAG CGTGCCGACCGA GCCGGTGAAGCCGGA Bphy_2718 3074480 - 3074226 - | hypothetical protein Bphy_2719 3074668 - 3075414 + | two component transcriptional regulator TERM 3201 3076620 - 3076582 - g 74 -14.5 -2.53747 | gap 1, overlap 3076571 3076581 3076579 CAAGGCGCAGAAGAT GC-TCGCGCGCGGCGACG ATCC CGCCGCCGTGCTCGAAGC GCTGTCGCAGGCGCT Bphy_2720 3075470 - 3076759 + | glutamyl-tRNA reductase TERM 3202 3076919 - 3076899 - g 75 -6.8 -4.4078 | overlap 3076915 CCGCCCCAATGAAAA CGAGCATG CAAGC CAAGCTCG ACCAGCTAACCACAC Bphy_2721 3076892 - 3077974 + | peptide chain release factor 1 TERM 3203 3078166 - 3078205 + G 71 -10.6 -3.63694 | gap 1, opp_overlap 3078157, overlap 3078167 3078202 GGAAACGCGGCGCGC GGCGGGCGAGCCGGTC-GC GCA GCTGATCGGCTCGCGCGAA TTCTTCGGACTCGAT TERM 3204 3078167 - 3078204 + G 71 -14.1 -2.77895 | gap 1, opp_overlap 3078157, overlap 3078166 3078202 GAAACGCGGCGCGCG GCGGGCGAGCCGGTC-GC GCA GCTGATCGGCTCGCGCGA ATTCTTCGGACTCGA TERM 3205 3078678 - 3078632 - g 78 -14.3 -3.18264 | opp_overlap 3078660 GCGCTCACCGACGAA GCCGACGGCCTGTCGGCGATC CGCGC GATCGTCGCCAGCGCGCCGGC GCGGCTCGTGCCGAA Bphy_2722 3077984 - 3078835 + | protein-(glutamine-N5) methyltransferase, release factor-specific Bphy_2723 3078948 - 3079259 + | glutaredoxin-like protein TERM 3206 3079346 - 3079313 - g 75 -7.6 -4.25104 | gap 3, overlap 3079294 3079291 CGCCCGTCAGGAAAA CGCACGCCGGCTGATCG TCG CGATCA-C-GG-GTGCG ACAGGCGCCATCTAC TERM 3207 3079799 - 3079830 + G 70 -2.2 -4.62783 | gap 1, opp_overlap 3079789, overlap 3079813 GACGATCGACCAGAT GGTCGACCATAC-CG TCG CGCGCGTGCTCGATC TTTTTGCGCTGGGTC Bphy_2724 3079284 - 3079892 + | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase Bphy_2725 3080015 - 3080800 + | extradiol ring-cleavage dioxygenase class III protein subunit B TERM 3208 3080858 - 3080837 - T 100 -17.3 -4.98531 | opp_overlap 3080837 CGCGCAAACTAAAAA GCCCGCCAG AATT CTGGCGGGC TTCTTCTTGTGTCAG TERM 3209 3080837 - 3080858 + T 100 -17.3 -4.06864 | opp_overlap 3080837 CGCGCAAACTAAAAA GCCCGCCAG AATT CTGGCGGGC TTCTTCTTGTGTCAG Bphy_2726 3082484 - 3080892 - | amino acid permease-associated region TERM 3210 3081486 - 3081513 + g 84 -14.2 -3.65522 | GCCGTACAGCGGATG CACGCTGCCGAA GATC TTCGGCATCGTG TTGTTGCGCTCCATC Bphy_2727 3082948 - 3083151 + | cold-shock DNA-binding domain-containing protein TERM 3211 3083173 - 3083201 + T 100 -12.6 -4.60041 | gap 1, opp_overlap 3083179, overlap 3083179 CTTTCTTCCGGAACG C-AAAAACCCCGC CTCG GCGGGGTTTTTTG TTTTTCGGCCTCAAT TERM 3212 3083194 - 3083179 - T 100 -11.8 -4.74103 | opp_overlap 3083179 3083173 TCCGGAACGCAAAAA CCCCGC CTCG GCGGGG TTTTTTGTTTTTCGG TERM 3213 3083179 - 3083194 + T 100 -11.8 -5.93252 | opp_overlap 3083179, overlap 3083173 TCCGGAACGCAAAAA CCCCGC CTCG GCGGGG TTTTTTGTTTTTCGG Bphy_2728 3084513 - 3083245 - | putative chaperone TERM 3214 3083407 - 3083432 + g 91 -16.9 -3.53091 | opp_overlap 3083391, overlap 3083421 TGCATCGACCTCACG CGGTGCGACGC CCGC GCGTTGCACCG TTTCGCGCGCGGCCT TERM 3215 3084155 - 3084121 - G 80 -5.4 -4.72272 | opp_overlap 3084151 GTCGTCGACGAAAAA CACCGGGCGACCGAGC ACC GCGCGGCTGATCGGCG TGCCTGCCGTCTGCT TERM 3216 3084337 - 3084358 + g 70 -5.8 -4.30809 | gap 1, overlap 3084337 ATACGCTTCGAGCGC CGCGCG-GC CATAT GCGCGCGTG TTTTCGTCGGTGTTG TERM 3217 3085494 - 3085454 - g 88 -9.8 -4.64676 | gap 2, overlap 3085480 GCACGGCGAAGAAAA GGAAGCGCGCC-GGAT-CGT CGA AGGTATCGAGGCGCGCTTCC GCGCGCAAGACCACG Bphy_2729 3084759 - 3086228 + | major facilitator transporter TERM 3218 3086267 - 3086252 - T 100 -11.8 -5.74122 | opp_overlap 3086250 CACCACACAAAAAAA CGGCCC AGAT GGGCCG CGTTGCGTCGTCCTG Bphy_2730 3086921 - 3086304 - | nitroreductase TERM 3219 3086595 - 3086547 - G 70 -11 -3.36273 | gap 2, opp_overlap 3086555, overlap 3086543 TGCCTGCAACACCAA CGACAGC-GCCGCTGCGC-CCGCA TCG TACGGCGCGCAGCGGTTGATCTCG CCCTTCGGCGTCAGC TERM 3220 3086555 - 3086586 + g 89 -16.6 -3.26947 | gap 1, opp_overlap 3086543 3086547 ACACCAACGACAGCG CCGCTGCGC-CCGCA TCG TACGGCGCGCAGCGG TTGATCTCGCCCTTC TERM 3221 3087066 - 3087011 - R 77 -12.3 -3.6292 | overlap 3087004 3087019 3087021 3087024 ATAAATATCGCGAAA GCGCATAAGAGGAGCGCGTCGCGGC ATCTCA GCCGCGACGCGCTTCACGGTCGAGC CGATTACGACGTCAC TERM 3222 3087058 - 3087019 - R 100 -20.7 -3.39668 | overlap 3087011 3087021 3087024 CGCGAAAGCGCATAA GAGGAGCGCGTCGCGGC ATCTCA GCCGCGACGCGCTTCAC GGTCGAGCCGATTAC TERM 3223 3087056 - 3087021 - R 100 -21.9 -3.2665 | overlap 3087019 3087011 3087024 CGAAAGCGCATAAGA GGAGCGCGTCGCGGC ATCTCA GCCGCGACGCGCTTC ACGGTCGAGCCGATT TERM 3224 3087053 - 3087024 - R 100 -22.2 -2.80817 | overlap 3087021 3087019 3087011 AAGCGCATAAGAGGA GCGCGTCGCGGC ATCTCA GCCGCGACGCGC TTCACGGTCGAGCCG Bphy_2731 3088361 - 3087078 - | major facilitator transporter TERM 3225 3087828 - 3087792 - G 70 -7.9 -3.9461 | gap 1 CTCGGGCAACAAGAA CGCGACGAGCGGCAGC ACGACG GCGGCCGCG-ATCGCG ACCGTCCACACGACT TERM 3226 3088581 - 3088627 + G 70 -5 -4.36914 | opp_overlap 3088556 3088555 3088582, overlap 3088582 3088582 CCGCCGTGCGCAGAC AG-CGGGCTCCGACGCGCAGCA ACATC TTCTGCGCG-CGGCGGCCGACC TTTTCTACAAGGAAG TERM 3227 3088972 - 3088962 - g 75 -6.8 -4.39954 | GAACAACAAGACAAA GCTG ATG CAGC GTCTGAACGAACTCT Bphy_2732 3088495 - 3089163 + | TetR family transcriptional regulator TERM 3228 3089524 - 3089499 - g 74 -10.5 -3.69434 | gap 1 GGAACGAATGCTAAA GCAGATGCGCCT GGA AGGCACA-CTGC AAATCGCGAGCTTCC Bphy_2733 3089191 - 3089760 + | hypothetical protein Bphy_2734 3090613 - 3089783 - | hypothetical protein Bphy_2735 3091004 - 3091324 + | hypothetical protein TERM 3229 3091359 - 3091333 - T 71 -12.2 -2.91264 | opp_overlap 3091330 GGGCTGATCCACAGA CGGCGGCGCG GCGCGCT CGCGCAGCCG ACATCTTGCGCCGTT Bphy_2736 3091745 - 3091533 - | hypothetical protein TERM 3230 3092159 - 3092214 + G 84 -11.9 -3.96327 | gap 3 CCGCCGAAGCGCTGG CTCGCGGC-GGCGTGC-GCGTCGACGTC TAC GACG-CGATGCCGTCCGTCGGCCGCAAG TTTCTGATGGCGGGT Bphy_2737 3092068 - 3093336 + | hypothetical protein Bphy_2738 3094522 - 3093353 - | methyltransferase small TERM 3231 3094494 - 3094548 + g 93 -17.8 -3.67498 | overlap 3094496 3094502 AGTGCGGTGTGTGGG TGCGAGAGGCGAGGCGTGGCCGCATG CAT CGCGCGGACTCGCTTCGCTTTTCGTA TTGTATTGAACGTTC TERM 3232 3094496 - 3094546 + g 93 -18.2 -3.41292 | overlap 3094494 3094502 TGCGGTGTGTGGGTG CGAGAGGCGAGGCGTGGCCGCATG CAT CGCGCGGACTCGCTTCGCTTTTCG TATTGTATTGAACGT TERM 3233 3094502 - 3094540 + g 100 -14.4 -4.49167 | overlap 3094496 3094494 GTGTGGGTGCGAGAG GCGAGGCGTGGCCGCATG CAT CGCGCGGACTCGCTTCGC TTTTCGTATTGTATT TERM 3234 3094651 - 3094626 - R 100 -21.9 -4.54727 | opp_overlap 3094626 CGCCGCAAAGCAAAA CGGGCCACGCG TTAC CGCGTGGCCCG TTTCTTGACGCTGGT TERM 3235 3094626 - 3094651 + r 100 -21.9 -4.1711 | opp_overlap 3094626 CGCCGCAAAGCAAAA CGGGCCACGCG TTAC CGCGTGGCCCG TTTCTTGACGCTGGT Bphy_2739 3095237 - 3094758 - | stringent starvation protein B Bphy_2740 3095924 - 3095313 - | glutathione S-transferase domain-containing protein TERM 3236 3095387 - 3095375 - G 71 -7.7 -4.09685 | opp_overlap 3095374 CCGGACGGCTGAAAA TACGC TCG GCGTA CTTCATCAGCGGCGC TERM 3237 3096001 - 3095951 - R 86 -11.9 -4.05875 | gap 1, opp_overlap 3095952 3095963 CTCAAAAAACTTAAA GGGCCAGCG-AGCGGGAAAACC GTCATGCA GGTCTTCCCTTTGCGCCGGCCC CACACCAGTTACGGC Bphy_2741 3096776 - 3096021 - | cytochrome c1 TERM 3238 3096311 - 3096327 + g 71 -8 -4.07885 | opp_overlap 3096311 GAAGCTGCCACAGCA CGTGAG GCATG CTCACG TTTTCGAACACCATA Bphy_2742 3098182 - 3096800 - | cytochrome b/b6 domain-containing protein Bphy_2743 3098799 - 3098182 - | ubiquinol-cytochrome c reductase, iron-sulfur subunit Bphy_2744 3099765 - 3099019 - | hypothetical protein TERM 3239 3099271 - 3099233 - G 70 -13.9 -2.60496 | opp_overlap 3099234, overlap 3099232 3099230 GCCGCCTCGAAATAG CCTTGCGCGGCGCC-CGTG CAC CACGCGACGCGGCGCA-GG TTCTTGTCGGGATCG TERM 3240 3099234 - 3099271 + g 86 -14.1 -3.79906 | gap 1, opp_overlap 3099233 3099232 3099230 CCGCCTCGAAATAGC CTTGCGCGGCG-CCCGTG CAC CACGCGACGCGGCGCAGG TTCTTGTCGGGATCG Bphy_2745 3099785 - 3100996 + | 2-alkenal reductase TERM 3241 3101025 - 3101071 + T 88 -16.9 -2.87564 | opp_overlap 3101030 3101035, overlap 3101030 3101036 GTTCAGGCCGCGCAC GCAAACAAAATGGGCAGT-CTCC AAC GGAGCACTGCCCTTTTTGTT-GC TGTCTGACCGCATGC TERM 3242 3101030 - 3101067 + T 90 -16.5 -3.32022 | gap 1, opp_overlap 3101030 3101035, overlap 3101025 3101036 GGCCGCGCACGCAAA CAAAATGGGCAGT-CTCC AAC GGAGCACTGCCCTTTTTG TTGCTGTCTGACCGC TERM 3243 3101067 - 3101030 - T 100 -16.5 -3.64703 | gap 1, opp_overlap 3101030 3101025 3101036, overlap 3101035 GGCCGCGCACGCAAA CAAAATGGGCAGT-CTCC AAC GGAGCACTGCCCTTTTTG TTGCTGTCTGACCGC TERM 3244 3101062 - 3101035 - T 100 -10.6 -4.90778 | gap 1, opp_overlap 3101030 3101025 3101036, overlap 3101030 CGCACGCAAACAAAA TGGGCAGT-CTCC AAC GGAGCACTGCCCT TTTTGTTGCTGTCTG TERM 3245 3101036 - 3101061 + T 100 -14.1 -5.17744 | gap 1, opp_overlap 3101035 3101030, overlap 3101030 3101025 GCACGCAAACAAAAT GGGCAGT-CTCC AAC GGAGCACTGCCC TTTTTGTTGCTGTCT Bphy_2746 3101902 - 3101123 - | Sec-independent protein translocase, TatC subunit Bphy_2747 3102493 - 3101945 - | twin-arginine translocation protein, TatB subunit TERM 3246 3102427 - 3102391 - G 79 -15 -3.01712 | overlap 3102371 GCGCGCGGCCGAACA GCGCGCCCGCCGTGCG GGCCA CGCGCGGCAAGCGCTC GGGCCCGAGCACGAC TERM 3247 3102540 - 3102576 + r 86 -8.7 -4.56914 | gap 1 AGCGCAGGCTCGGCT GGCGCCGGATTAGCGG GAATCG CCGG-AATGCGGCGCC TTTTCCTTTGCGTCG Bphy_2748 3102785 - 3102549 - | twin arginine-targeting protein translocase TERM 3248 3103029 - 3103019 - R 83 -8.2 -4.65895 | GTGCGTAGTCAAAAA GCCG ATG CGGC GAATCTATGTCGATT Bphy_2749 3103472 - 3103098 - | histidine triad (HIT) protein Bphy_2750 3103905 - 3103510 - | hypothetical protein TERM 3249 3104013 - 3104029 + r 85 -15.1 -3.07994 | opp_overlap 3104002 ACGAGCCTGCGCAGT GCGCGGC TTG GCCGCGC TTGCCTGAGCTTGCC Bphy_2751 3104422 - 3104048 - | phosphoribosyl-ATP diphosphatase TERM 3250 3104080 - 3104090 + g 70 -2.4 -4.63218 | CGCGCTCGCGGCTCT TGCG CAA CGCC TTTTCTTCGAGCCCC TERM 3251 3104212 - 3104243 + g 71 -14.4 -2.70932 | gap 1, opp_overlap 3104215 CGGCTGTTTCGCTAA CGAGCGCCTTG-CGC TCC GCGCCGAGGCGCACG TCCTTCGCGGCCAGC Bphy_2752 3104826 - 3104419 - | phosphoribosyl-AMP cyclohydrolase Bphy_2753 3105604 - 3104831 - | imidazoleglycerol phosphate synthase, cyclase subunit TERM 3252 3105042 - 3105001 - G 90 -16.7 -3.32914 | gap 1 AGGCAATCACAGGAA TCGACACCGCGTCCGACACG GCG CGCGTCAG-CGCGATGTCAA AGCCGCTCTTCGTGC Bphy_2754 3106513 - 3105761 - | phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase Bphy_2755 3107364 - 3106723 - | imidazole glycerol phosphate synthase, glutamine amidotransferase subunit Bphy_2756 3107981 - 3107361 - | multiple antibiotic resistance (MarC)-related protein Bphy_2757 3108629 - 3108042 - | imidazoleglycerol-phosphate dehydratase TERM 3253 3108341 - 3108307 - G 77 -4.9 -4.63527 | gap 1, overlap 3108308 GGACGACCGGAAAAA TCGATC-ACGACGCGC GACA GCGCCTCGTCGAGCGG CACGTAGGAATGACC Bphy_2758 3109753 - 3108683 - | histidinol-phosphate aminotransferase Bphy_2759 3111231 - 3109909 - | histidinol dehydrogenase TERM 3254 3110792 - 3110848 + g 72 -8.5 -4.07568 | gap 1, opp_overlap 3110824 ATCAGCACCGACGAC GGATACGCCGCCTTGCCGC-CTGGCA CATAAA TGCCCGCGCGGTCGAGCGGCGTCACC TTTTGCCCGAGCACC Bphy_2760 3111985 - 3111287 - | ATP phosphoribosyltransferase TERM 3255 3111733 - 3111758 + g 88 -17.5 -3.04461 | opp_overlap 3111747 3111748 TCAGCACGTCCTTGC CGGCGACGCCG AAAT CGGCGGCGCCG TATTCGACGTACGTG TERM 3256 3111868 - 3111897 + g 74 -10 -3.73224 | gap 1 GGTCTTCCGTCACTT CGATGCCGGCTGC GGCGA GCAGC-GGCACCG TTTCCTCGAAAATGC Bphy_2761 3113244 - 3111982 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 3257 3113297 - 3113324 + r 86 -14.1 -3.26989 | overlap 3113293 GTCTTGTGGGCGGTT GCTGCGGCGCC ATGCGC GGCGTCGCGGC TCTCTTGTGTGTCTT Bphy_2762 3113723 - 3113484 - | BolA family protein Bphy_2763 3114489 - 3113734 - | ABC-2 type transporter TERM 3258 3114071 - 3114051 - G 71 -12.5 -3.29144 | opp_overlap 3114044 CGAGCGTGCCGAGAA TCGCCGAGC CCA GCACGGCGA ACGCGATGATGTAGA Bphy_2764 3115412 - 3114486 - | ABC transporter related TERM 3259 3115009 - 3115037 + g 72 -3 -4.66609 | gap 1, overlap 3115010 CGGCGCTTCATCCCG CCCGACAGCGCGC GCAT GTTCGC-GTCGGC TTTTTCGGTGAGATC TERM 3260 3115358 - 3115380 + g 70 -2.7 -4.66833 | gap 1 AGCTGACGCCTTTAA GCGCCTGCAG ATCC TTGTAG-CGC TTTTTGACGTTACGA Bphy_2765 3116006 - 3115701 - | hypothetical protein Bphy_2766 3116632 - 3116003 - | toluene tolerance family protein Bphy_2767 3117719 - 3116772 - | VacJ family lipoprotein TERM 3261 3117782 - 3117756 - R 71 -10 -3.61178 | opp_overlap 3117779 3117780 CGGATGCACCCGAAA CGGCCGCAGCAG GCG CTGCGGGAGCCG GTGCTGCAGGCTCGG Bphy_2768 3118287 - 3117733 - | hypothetical protein Bphy_2769 3119133 - 3118366 - | hypothetical protein TERM 3262 3119067 - 3119047 - G 93 -3.9 -5.23316 | overlap 3119039 CAGCAGAGGAAAAAA TTCCAGCAC GAG GCGCAAGAA CATGCGCGCCGCATA Bphy_2770 3119951 - 3119130 - | ABC transporter related Bphy_2771 3121156 - 3120029 - | thiamine-phosphate diphosphorylase Bphy_2772 3121977 - 3121153 - | thiazole biosynthesis family protein Bphy_2773 3122217 - 3122020 - | thiamine biosynthesis protein ThiS TERM 3263 3122159 - 3122105 - G 71 -9.1 -3.72576 | overlap 3122106 GCGCGCGCGACGAAA TTGCCGTTCAGCGCG-ACGGCGAACGG CGG CCGCGCGCCGAACGCGCTGAGC-GCGT CGGCGACGGTCGCGC Bphy_2774 3123388 - 3122228 - | FAD dependent oxidoreductase TERM 3264 3122349 - 3122331 - G 79 -10.2 -4.09685 | CGCCAGTCGGCAAAA GCGTCGGC ATC GGCGACGC GGCCATCGAGCAGCG TERM 3265 3123033 - 3123081 + g 100 -21 -2.78384 | opp_overlap 3123061 AGCAGGTCGGCAGGC GCGTTCGCGCGCAAGCGTCGCT CGAAC AGCGGCGCTTCGGCGCGATCGC TGTGATGCCAGACGA TERM 3266 3123563 - 3123543 - H 93 -13.9 -3.84961 | TACCCAAGGACGAAA CCGGCGGGC AAG GCCGGCCGG GCATGGGCGCTCACG TERM 3267 3124705 - 3124720 + G 77 -5.4 -4.68593 | overlap 3124706 ACCAGCAGCAGCGCG TGGAAG CCGA CTTCCG TTTTTCGCTGATCCG Bphy_2775 3124044 - 3125777 + | ABC transporter Bphy_2776 3126139 - 3126633 + | hypothetical protein TERM 3268 3126634 - 3126655 + F 78 -6.6 -4.57073 | gap 1 CGCATCGCGCGCTAA GCGTACGTC CTCCA GACG-ACGC TTTTTCGACAACCTG Bphy_2777 3126721 - 3127266 + | hypothetical protein TERM 3269 3128068 - 3128056 - g 76 -9.1 -4.08216 | GCAGCTCCTCGAAAA GCTGC ACG GCAGC ACCGATACGCATCGC Bphy_2778 3127502 - 3128248 + | two component transcriptional regulator Bphy_2779 3128994 - 3128308 - | flagellar L-ring protein TERM 3270 3128658 - 3128693 + g 74 -14.6 -2.64616 | opp_overlap 3128643 3128641, overlap 3128647 3128660 GCCGCGCCAGACGCG CTGCCGTGCCCGTCGA TTTG TCGGCGGCCTCGGCGG TGATGTCGCTCGCAC Bphy_2780 3129773 - 3129048 - | hypothetical protein Bphy_2781 3130013 - 3129804 - | putative lipoprotein TERM 3271 3129949 - 3129919 - G 75 -11.9 -3.46602 | gap 1, overlap 3129890 GCCGCGACAGCACAA CCGTCGA-GCGGCA GCAC TGCCGCGCCAACGG CGGACCACATCGCGA TERM 3272 3130025 - 3129999 - G 72 -3 -4.65895 | gap 1 CGCGCGACTGAAAAA GCGTGATTTCG GCACAG CGAACTC-CGC CAACTCAGGCCGTCG Bphy_2782 3130218 - 3130030 - | hypothetical protein TERM 3273 3130966 - 3130927 - g 80 -12.2 -3.75169 | gap 1 GACTATCTGACGAAA CCAT-TCGATCCGCGCGAG CTG CTCGCGCGCATCCAGACGG TGCTCCGCCGGCGCG Bphy_2783 3130618 - 3131355 + | two component transcriptional regulator Bphy_2784 3131363 - 3132676 + | integral membrane sensor signal transduction histidine kinase TERM 3274 3132793 - 3132824 + T 100 -13 -5.1861 | gap 1 CGGCGCCTCCCTGTT CGGTCCGTCCC-GCT GCC ACCTGGGACGGGCCG TTTTTTCCTGGTGCG Bphy_2785 3133812 - 3132847 - | protein tyrosine/serine phosphatase TERM 3275 3133885 - 3133867 - R 76 -12.4 -3.42395 | overlap 3133865 3133868 CGCAGGAGCGAAAGA CGCACGCG ATG CGCGTGCA CGTGGATGGCCTCGC TERM 3276 3133884 - 3133868 - R 74 -13.7 -2.65116 | overlap 3133867 3133865 GCAGGAGCGAAAGAC GCACGCG ATG CGCGTGC ACGTGGATGGCCTCG Bphy_2786 3134756 - 3134112 - | 2'-5' RNA ligase TERM 3277 3134819 - 3134843 + r 100 -13.6 -5.07053 | gap 1, opp_overlap 3134819 CATGCCAGAAAAAAA CCGGGTCGCTC TTGC GAGCG-CCCGG TTTTTTGACCTGCTT TERM 3278 3134843 - 3134819 - R 100 -13.6 -5.626 | gap 1, opp_overlap 3134819 CATGCCAGAAAAAAA CCGGGTCGCTC TTGC GAGCG-CCCGG TTTTTTGACCTGCTT TERM 3279 3134969 - 3134932 - R 74 -13.4 -2.52623 | gap 2, overlap 3134931 3134929 CCTCCTGCAGAACAG GGCGGCTTGCCGCGCAAC ACAT GCAGCGCGGC--GCCGCC GGGACGATCGAGACT Bphy_2787 3136501 - 3134984 - | glutamate synthase, NADH/NADPH, small subunit TERM 3280 3136488 - 3136530 + g 81 -14.2 -3.51076 | overlap 3136482 3136488 ATCGGTGAGGGGATC G-GCGCCCGCCGCATCGCGT TGTGC ACGCAA-GCGGCGGGTGCGC TTCGTTATGTCGTCA TERM 3281 3136488 - 3136529 + g 71 -14.4 -2.70164 | gap 1, overlap 3136488 3136482 ATCGGTGAGGGGATC GGCGCCCGCCGCATCGCGT TGTGC ACGCAA-GCGGCGGGTGCG CTTCGTTATGTCGTC Bphy_2788 3141268 - 3136565 - | glutamate synthase (ferredoxin) TERM 3282 3137052 - 3137025 - G 79 -11.2 -3.92869 | overlap 3137051 TTACGCACGCAGAAA CGCTCGCCCGCG ACGC CGCGGAAGAACG ACTCGCCTTCGATCG TERM 3283 3140569 - 3140546 - G 78 -13.8 -3.28712 | opp_overlap 3140531 CGTGTTGGTCGAGAA GCGCTGGTGC ACGA GCGCCAGCGC CGACACGACGCGCTC TERM 3284 3141548 - 3141521 - R 76 -7.1 -4.44915 | opp_overlap 3141521 3141526, overlap 3141526 CAATTACCGACAAAA CAAAACGGCAT GCAGGG ATGCCGTTTTC TTTTGGATGCAGCCA TERM 3285 3141521 - 3141548 + r 71 -7.1 -4.18018 | opp_overlap 3141521 3141526, overlap 3141526 CAATTACCGACAAAA CAAAACGGCAT GCAGGG ATGCCGTTTTC TTTTGGATGCAGCCA TERM 3286 3141543 - 3141526 - R 91 -7 -5.19275 | opp_overlap 3141521 3141526, overlap 3141521 ACCGACAAAACAAAA CGGCAT GCAGGG ATGCCG TTTTCTTTTGGATGC TERM 3287 3141526 - 3141543 + r 90 -7 -5.10933 | opp_overlap 3141526 3141521, overlap 3141521 ACCGACAAAACAAAA CGGCAT GCAGGG ATGCCG TTTTCTTTTGGATGC Bphy_2789 3142295 - 3141588 - | hypothetical protein Bphy_2790 3142482 - 3143204 + | OmpW family protein Bphy_2791 3143554 - 3143937 + | protein of unknown function DUF883 ElaB TERM 3288 3144046 - 3144012 - T 70 -12.3 -2.71144 | gap 2, opp_overlap 3144003 3144001 3144018 3144038, overlap 3144018 GATCGCTGCGAAGGA CGGAAAGCGGCGCATGC TTT GCA--CGCCGCTTTCCA CTTCGCGCTTTGCAT Bphy_2792 3145316 - 3144099 - | deoxyguanosinetriphosphate triphosphohydrolase Bphy_2793 3146461 - 3145370 - | 3-dehydroquinate synthase Bphy_2794 3147020 - 3146469 - | shikimate kinase TERM 3289 3146636 - 3146655 + g 84 -7 -4.82901 | GCCCTTTCGGGTCTT CCGTCTGC AGAA GCGGCCGG TTTTTGTCGCGGCGC TERM 3290 3146874 - 3146891 + g 77 -12.7 -3.31415 | overlap 3146869 GAAGATCACCGGGAT GCGCGCA CCCG TGCGCGC TTCGATTTCATGGTC TERM 3291 3147130 - 3147142 + r 71 -10.5 -3.54459 | overlap 3147140 TGGTGCTTTCGGCCC GCGCC CGT GGCGC TTTGCCGGCGATTGG Bphy_2795 3148729 - 3147158 - | type IV pilus secretin PilQ Bphy_2796 3149640 - 3148726 - | hypothetical protein Bphy_2797 3150269 - 3149637 - | fimbrial assembly family protein Bphy_2798 3151225 - 3150266 - | hypothetical protein TERM 3292 3151985 - 3151947 - g 71 -9.6 -3.69216 | overlap 3151945 3151948 TCTCCAGCGAAAAGA CGTACACGCGCAAGATCT ACG AGATGCTGCTCGCGTACA AGATCGAATCGAAGT TERM 3293 3153626 - 3153603 - g 81 -10.9 -3.9941 | TCGGCGACAAGGAAA CGGGCGGCG GGCTCG CGCTGCCCG TGTGGATCGAGTACA Bphy_2799 3151478 - 3153868 + | 1A family penicillin-binding protein TERM 3294 3153916 - 3153892 - T 100 -21.5 -5.40072 | opp_overlap 3153892 GCTCCCTGAAAAAAA GCCGCCGCGTA TTG TACGCGGCGGC TTTTTACTTTCCGCG TERM 3295 3153892 - 3153916 + T 100 -21.5 -4.98531 | opp_overlap 3153892 GCTCCCTGAAAAAAA GCCGCCGCGTA TTG TACGCGGCGGC TTTTTACTTTCCGCG Bphy_2800 3154285 - 3153968 - | iron donor protein CyaY Bphy_2801 3154321 - 3154629 + | putative lipoprotein TERM 3296 3154985 - 3154964 - g 71 -13 -3.01712 | overlap 3154976 3154977 CCGGTGTGGGCAAGA GCGTCGCG GAAATG CGCGACGC GCTCGCGGCAGGCGT Bphy_2802 3154639 - 3155901 + | diaminopimelate decarboxylase TERM 3297 3155933 - 3155957 + T 100 -12.9 -5.29846 | opp_overlap 3155933 CGCTCACAGTCAAAA GGCGATGCG CTCATCA CGCATCGCC TTTTTGTTTCCGGTT TERM 3298 3155957 - 3155933 - T 95 -13.6 -4.2349 | opp_overlap 3155933 CGCTCACAGTCAAAA GGCGATGCGC TCATC ACGCATCGCC TTTTTGTTTCCGGTT Bphy_2803 3156700 - 3155987 - | ferric reductase domain-containing protein Bphy_2804 3157707 - 3156712 - | oxidoreductase molybdopterin binding TERM 3299 3156901 - 3156886 - G 77 -4.6 -4.63932 | CACGTTCGAATAAAA GCCGTA CTCG TTCGGC GCATAGGTGTTCCAG TERM 3300 3157875 - 3157826 - R 93 -17.3 -3.29511 | gap 1, opp_overlap 3157838 3157839, overlap 3157827 3157839 GTGATCCTTCCATAA CGGCGTAAAAAAACCGCCG-GTGC AGT GCACGCGGCGGCTTTTTCACGCTT CGAGGCATACAACTG TERM 3301 3157874 - 3157827 - R 100 -20.8 -2.57564 | gap 1, opp_overlap 3157838 3157839, overlap 3157826 3157839 TGATCCTTCCATAAC GGCGTAAAAAAACCGCCG-GTGC AGT GCACGCGGCGGCTTTTTCACGCT TCGAGGCATACAACT TERM 3302 3157838 - 3157863 + r 93 -11.1 -4.62471 | gap 1, opp_overlap 3157827 3157826 3157839, overlap 3157839 TAACGGCGTAAAAAA ACCGCCG-GTGC AGT GCACGCGGCGGC TTTTTCACGCTTCGA TERM 3303 3157862 - 3157839 - R 100 -14.6 -5.41746 | gap 1, opp_overlap 3157838 3157839, overlap 3157827 3157826 AACGGCGTAAAAAAA CCGCCG-GTGC AGT GCACGCGGCGG CTTTTTCACGCTTCG TERM 3304 3157839 - 3157862 + r 87 -14.6 -3.37 | gap 1, opp_overlap 3157839 3157827 3157826, overlap 3157838 AACGGCGTAAAAAAA CCGCCG-GTGC AGT GCACGCGGCGG CTTTTTCACGCTTCG Bphy_2805 3159108 - 3157891 - | cytochrome c-type biogenesis protein CcsB Bphy_2806 3161338 - 3159113 - | ResB family protein TERM 3305 3159773 - 3159783 + g 72 -8.2 -4.1711 | opp_overlap 3159763, overlap 3159772 GAAGAGCGTCAGCAC GCGC GCC GCGC TTTCTTCCAGATGCT TERM 3306 3161401 - 3161365 - R 80 -2.3 -5.27779 | gap 2, opp_overlap 3161358 3161365 3161378 CTGAACAGCAAAAAA GGGTGCAGGTTTATCGC TGTAT GCGATTC-CCT-CACCC TTTTCTTGTTTTCTC TERM 3307 3161365 - 3161401 + r 77 -2.3 -5.12916 | gap 2, opp_overlap 3161365, overlap 3161358 3161378 CTGAACAGCAAAAAA GGGTGCAGGTTTATCGC TGTAT GCGATTC-CCT-CACCC TTTTCTTGTTTTCTC Bphy_2807 3162119 - 3161466 - | cytochrome c class I Bphy_2808 3162386 - 3163048 + | GTP-binding protein HSR1-related TERM 3308 3163116 - 3163096 - f 100 -11.8 -5.60993 | TCGCCCAGAAAAAAA CCCGCCGC TATTG ACGGCGGG TTAAACAGCCTAATC Bphy_2809 3163275 - 3164273 + | porphobilinogen synthase TERM 3309 3164340 - 3164367 + T 72 -8.4 -3.84985 | gap 1, overlap 3164332 CGACAGTGACTGCAA GCGGAGG-GGTCG ACC TGACAGCCTCCGC TTCTCTCTTTTAATC Bphy_2810 3166292 - 3164436 - | protein-disulfide reductase TERM 3310 3165239 - 3165207 - G 71 -7.5 -4.18494 | overlap 3165209 GATGCCCATCGAAAA TAGGGCTACACCGCC TAG GACGGCGTTGCCCGT GTGCGCGATGAAGGC TERM 3311 3165237 - 3165209 - G 89 -14.5 -3.69216 | overlap 3165207 TGCCCATCGAAAATA GGGCTACACCGCC TAG GACGGCGTTGCCC GTGTGCGCGATGAAG TERM 3312 3165599 - 3165577 - G 76 -9.8 -4.1721 | AGTGACAGCGCAAAA CCGCGCGC CCGCGTC ACGCGCGG GCCTTCGCCAATGAT Bphy_2811 3166617 - 3166285 - | CutA1 divalent ion tolerance protein TERM 3313 3166726 - 3166743 + r 100 -8.4 -4.99435 | opp_overlap 3166726, overlap 3166720 GCTGAAAGCAAAAAA GCCAGG CTTTCA CCTGGC TTTTTAATTGTTGCC TERM 3314 3166743 - 3166726 - R 100 -9.1 -5.37593 | opp_overlap 3166726 3166720 GCTGAAAGCAAAAAA GCCAGGC TTTC ACCTGGC TTTTTAATTGTTGCC Bphy_2812 3167160 - 3166765 - | ribosomal protein L17 TERM 3315 3167282 - 3167243 - R 100 -15.3 -4.65895 | gap 1, opp_overlap 3167250, overlap 3167248 GCCGGTATTGAAAAA GGCAA-GACGCGGATTTT AAAGG AAAATCCGCGTCATTACC AGTTGCGGTACGACT TERM 3316 3167276 - 3167248 - R 89 -16.2 -3.46102 | opp_overlap 3167250, overlap 3167243 TATTGAAAAAGGCAA GACGCGGATTTT AAAGG AAAATCCGCGTC ATTACCAGTTGCGGT TERM 3317 3167250 - 3167274 + r 73 -13 -2.73542 | opp_overlap 3167248 3167243 TTGAAAAAGGCAAGA CGCGGATTTT AAAGG AAAATCCGCG TCATTACCAGTTGCG Bphy_2813 3168289 - 3167312 - | DNA-directed RNA polymerase, alpha subunit TERM 3318 3167836 - 3167857 + g 72 -3.6 -4.62872 | gap 1, overlap 3167837 CGTAACGACGCACGT TGCC-CGGC ACATA GCCGCGGCC TTTTTCGACCTTGAT TERM 3319 3168404 - 3168359 - R 90 -10.4 -4.68655 | gap 1, opp_overlap 3168359 CAACCTGAAAATAAA CAGCCGAGGCGCCCC-CTTGC CTAAC GCAATCAGGGAACCTCGGCCG TTAATCCGATTAGCG Bphy_2814 3169037 - 3168414 - | ribosomal protein S4 TERM 3320 3169172 - 3169129 - R 100 -18.2 -3.22388 | gap 1, opp_overlap 3169163 3169165, overlap 3169163 TAGTCAATTCATTAA CGCAAGCAGCCTGCTACCGCC TTT AGCGGCAACAGGC-GCATGCG GAGCAAGCGTCTTAG Bphy_2815 3169588 - 3169184 - | ribosomal protein S11 Bphy_2816 3169982 - 3169617 - | ribosomal protein S13 TERM 3321 3170018 - 3170003 - R 81 -3.2 -5.27335 | opp_overlap 3170017, overlap 3170017 TTCCTCAAACAAAAA GCGC AAACAAAA GCGC GGCGTTCAGCCTTGA Bphy_2817 3170140 - 3170024 - | ribosomal protein L36 Bphy_2818 3170379 - 3170161 - | translation initiation factor IF-1 Bphy_2819 3171734 - 3170388 - | preprotein translocase, SecY subunit Bphy_2820 3172215 - 3171781 - | ribosomal protein L15 Bphy_2821 3172428 - 3172246 - | ribosomal protein L30 Bphy_2822 3172957 - 3172439 - | ribosomal protein S5 Bphy_2823 3173337 - 3172972 - | ribosomal protein L18 Bphy_2824 3173880 - 3173350 - | ribosomal protein L6 Bphy_2825 3174295 - 3173900 - | ribosomal protein S8 Bphy_2826 3174615 - 3174310 - | ribosomal protein S14 Bphy_2827 3175162 - 3174623 - | ribosomal protein L5 Bphy_2828 3175484 - 3175176 - | ribosomal protein L24 Bphy_2829 3175862 - 3175494 - | ribosomal protein L14 Bphy_2830 3176020 - 3175880 - | hypothetical protein TERM 3322 3176108 - 3176070 - R 77 -11.9 -3.51934 | opp_overlap 3176077, overlap 3176041 3176068 3176071 3176075 GGGCTCCCACAAAGA GGGAAGACCGAGATTAT AACAA ATAATCTCGGTCTTGCA AGCGAAATCTACTGC TERM 3323 3176107 - 3176071 - R 83 -15.4 -2.70946 | opp_overlap 3176077, overlap 3176041 3176070 3176068 3176075 GGCTCCCACAAAGAG GGAAGACCGAGATTAT AACAA ATAATCTCGGTCTTGC AAGCGAAATCTACTG TERM 3324 3176103 - 3176075 - R 86 -14.8 -3.26719 | opp_overlap 3176077, overlap 3176071 3176070 3176068 CCCACAAAGAGGGAA GACCGAGATTAT AACAA ATAATCTCGGTC TTGCAAGCGAAATCT Bphy_2831 3176426 - 3176154 - | ribosomal protein S17 Bphy_2832 3176620 - 3176423 - | ribosomal protein L29 Bphy_2833 3177044 - 3176628 - | ribosomal protein L16 Bphy_2834 3177841 - 3177047 - | ribosomal protein S3 TERM 3325 3177161 - 3177173 + g 77 -4.7 -4.63486 | GCCCGGACGTGCGTT GCGGC GCG GACGC TTTTCTTCGGCGACT TERM 3326 3177679 - 3177695 + g 71 -9.3 -3.70751 | GACGCTCGATCACCA CGCGGCC GAC GGACGCG TTCTTCAGCTTCTTC Bphy_2835 3178182 - 3177853 - | ribosomal protein L22 Bphy_2836 3178470 - 3178195 - | ribosomal protein S19 Bphy_2837 3179308 - 3178481 - | ribosomal protein L2 Bphy_2838 3179625 - 3179311 - | ribosomal protein L25/L23 Bphy_2839 3180242 - 3179622 - | ribosomal protein L4/L1e Bphy_2840 3180901 - 3180242 - | ribosomal protein L3 TERM 3327 3180950 - 3180980 + r 80 -4.7 -5.0133 | gap 1, opp_overlap 3180944 3180950, overlap 3180952 3180972 3180978 GCTAATTTACAAAAT GCCG-CGCATTTCG AACG TGAAGTGCGACGAC TTTTTTGCGCAAATG TERM 3328 3180998 - 3181029 + r 100 -15.3 -4.37092 | opp_overlap 3181004, overlap 3180978 3180972 3181004 TTTTGCGCAAATGCG CGAAAAGCCTTGC ATTATA GCGAGGCTTTTCG TTTTCTGCAAGCAAT TERM 3329 3181004 - 3181023 + r 84 -7.1 -4.73108 | opp_overlap 3181004, overlap 3180978 3180972 3180998 GCAAATGCGCGAAAA GCCTTGC ATTATA GCGAGGC TTTTCGTTTTCTGCA Bphy_2841 3181400 - 3181089 - | ribosomal protein S10 TERM 3330 3181498 - 3181455 - R 72 -5.9 -4.46587 | gap 1, overlap 3181452 3181459 CTATGAATAAAAGAA CGTAGGTCTGGGCCGCTCGC GAGGG GCGAATG-CCCAGACCCGGG CACATACTGCTAGAT TERM 3331 3181494 - 3181459 - R 70 -11.9 -2.79659 | gap 1, overlap 3181455 3181452 GAATAAAAGAACGTA GGTCTGGGCCGCTCGC GAGGG GCGAATG-CCCAGACC CGGGCACATACTGCT Bphy_2842 3182717 - 3181527 - | translation elongation factor Tu Bphy_2843 3184868 - 3182766 - | translation elongation factor G TERM 3332 3183101 - 3183111 + g 75 -6.8 -4.42639 | opp_overlap 3183094 CCATCGAACCAGCCA TGCG GAA CGCA TTTTCGTTCGAGTCT TERM 3333 3184957 - 3184926 - R 100 -18.8 -4.1891 | gap 1, opp_overlap 3184924 3184923 3184955 3184956 GCGCCCTAACACAAA CGGGCGAG-GCGCTT TGT AAGCGCACCCGCCCG GAATTCTTTCCGCTT Bphy_2844 3185467 - 3184997 - | ribosomal protein S7 Bphy_2845 3186027 - 3185647 - | ribosomal protein S12 TERM 3334 3186057 - 3186091 + r 93 -9.4 -4.72386 | opp_overlap 3186048 3186054 3186057 3186077 3186078, overlap 3186077 ATTGAACAAAATCGA CGTGTTCGTTTCTG GGCAAAG CAAAAACGAACGCG TTTTTGACTGCTTTC Bphy_2846 3188106 - 3186259 - | ATP-dependent DNA helicase RecQ TERM 3335 3188241 - 3188262 + r 85 -11.5 -4.07568 | opp_overlap 3188227 3188241 ACAGGCGAAAAAAAA CCGCCCGGT CGAA ACCAGGCGG TTTTGCCAACCGAGA TERM 3336 3188262 - 3188241 - R 100 -13.7 -5.79526 | opp_overlap 3188241, overlap 3188227 ACAGGCGAAAAAAAA CCGCCCGGT CGAA ACCAGGCGG TTTTGCCAACCGAGA TERM 3337 3188306 - 3188279 - R 73 -11.2 -3.41878 | opp_overlap 3188279 3188286 3188294 TTTGCCAACCGAGAA CGAGATAGCGGC TTGC GCCGCCAGCCCG CTTACTCGTTGGTAT Bphy_2847 3192549 - 3188308 - | DNA-directed RNA polymerase, beta' subunit Bphy_2848 3196677 - 3192571 - | DNA-directed RNA polymerase, beta subunit TERM 3338 3193867 - 3193915 + g 71 -13.9 -2.73483 | gap 1, overlap 3193869 3193904 3193905 ACGCGTGAACACCTG CACGTCGATGACCGTGCCGCTC ATGCCC GA-CGGCACGCGCAGCGACGTG TCCTTCACGTCCGAT TERM 3339 3193949 - 3193960 + g 70 -2.2 -4.63932 | gap 1, overlap 3193933 TTCTCGCCGAAAATC GC-GC GCA GCAGC TTTTCTTCCGGCGTC TERM 3340 3196895 - 3196865 - R 72 -9.8 -3.74693 | opp_overlap 3196890, overlap 3196866 3196890 3196892 CGCTACCCGACCAAA CTTGCCTTCTGCAG TCG CTTCAGAAGACAAA GAGAAACGCCAGTCG TERM 3341 3196926 - 3196902 - R 72 -5.6 -4.45693 | opp_overlap 3196890 3196914, overlap 3196892 3196890 GAAGACAAAGAGAAA CGCCAGTCGA ACTTG CCGAACGGCG ATTTTCTTTGGCTTC TERM 3342 3196914 - 3196927 + r 80 -4.5 -4.94962 | opp_overlap 3196902 3196892 3196890, overlap 3196890 AAACGCCAGTCGAAC TTGCC GAAC GGCGA TTTTCTTTGGCTTCT TERM 3343 3197027 - 3197002 - R 100 -14 -5.06735 | CACAAAGCACAAAAA GGCCGGCGGT GTGAAA ACCGCCAGCC TTCGCACAGCGCGCT Bphy_2849 3197425 - 3197048 - | ribosomal protein L7/L12 Bphy_2850 3197998 - 3197501 - | ribosomal protein L10 TERM 3344 3198250 - 3198217 - R 71 -12.5 -2.57211 | overlap 3198203 3198216 ACGGTCTTTGACAAC CGGTCGCTCGATT CGGACTGC AATCGTGCGACCG CCCAAAGCCCTTAAA Bphy_2851 3199000 - 3198302 - | ribosomal protein L1 Bphy_2852 3199432 - 3199001 - | ribosomal protein L11 TERM 3345 3199572 - 3199544 - R 81 -13.2 -3.60971 | gap 1, overlap 3199546 ACCGTAAGCGCGAAA GACGAATCGCGCC GTCT GGCGCGATCCG-C AAAAACCCAATTTAA TERM 3346 3199571 - 3199546 - R 90 -16.9 -3.38314 | overlap 3199544 CGTAAGCGCGAAAGA CGAATCGCGCC GTCT GGCGCGATCCG CAAAAACCCAATTTA Bphy_2853 3200141 - 3199584 - | NusG antitermination factor Bphy_2854 3200523 - 3200143 - | preprotein translocase, SecE subunit TERM 3347 3200672 - 3200641 - R 77 -13.8 -2.92171 | opp_overlap 3200638, overlap 3200638 TATACCCCTAAACCA TTTTGGGATTGGCG GCAT CGCCAACCCCGAAA CCACTTAGTCGATCA Bphy_2855 3201895 - 3200705 - | translation elongation factor Tu TERM 3348 3201903 - 3201913 + r 75 -5.4 -4.68424 | TTGGCCATTTTCGAC TCCT AAG AGGA TTTTTCCGTACGTTG TERM 3349 3202393 - 3202358 - R 100 -16.2 -4.10612 | opp_overlap 3202364 AGTGATAACTATAAA CGCCAAGACCCCGC TTTTGAGG GCGGGGTCTTGGTG ATGGGTAAGGAGCCT TERM 3350 3202364 - 3202387 + r 75 -12.4 -3.22298 | opp_overlap 3202358 AACTATAAACGCCAA GACCCCGCTT TTGA GGGCGGGGTC TTGGTGATGGGTAAG TERM 3351 3205044 - 3205055 + r 71 -7.2 -4.2354 | AGGATCTGTTTCACT CCCC TCCC GGGG TTCTTTTCGCCTTTC Bphy_2856 3209485 - 3208127 - | GDSL family lipase TERM 3352 3209367 - 3209353 - G 75 -7.1 -4.39386 | overlap 3209365 TGGAAACGAGCAAAA CGGTC GACAG GACCG CGCCGCACGCGACGG Bphy_2857 3209587 - 3210585 + | phenylacetate-CoA oxygenase, PaaG subunit Bphy_2858 3210625 - 3210909 + | phenylacetate-CoA oxygenase, PaaH subunit TERM 3353 3211517 - 3211507 - g 77 -4.6 -4.66609 | GACGCGACGGAAAAA GCGA TCG CCGC AGCCGGTATCGGCCC Bphy_2859 3210919 - 3211722 + | phenylacetate-CoA oxygenase, PaaI subunit Bphy_2860 3211751 - 3212326 + | phenylacetate-CoA oxygenase, PaaJ subunit Bphy_2861 3212328 - 3213416 + | phenylacetate-CoA oxygenase/reductase, PaaK subunit TERM 3354 3213551 - 3213507 - f 100 -22.2 -2.62396 | opp_overlap 3213508 GATCCGCTTACACTA GGGGCCGCTCGCTACAGGAA GGATG TTCCTGCTGCGAGCGGCCCT TTCTGTTTCCTGGTC TERM 3355 3213508 - 3213550 + F 100 -23.5 -4.37506 | opp_overlap 3213507 ATCCGCTTACACTAG GGGCCGCTCGCTACAGGAA GGATG TTCCTGCTGCGAGCGGCCC TTTCTGTTTCCTGGT Bphy_2862 3213616 - 3214431 + | hypothetical protein Bphy_2863 3214449 - 3215063 + | TetR family transcriptional regulator Bphy_2864 3215315 - 3215980 + | GCN5-related N-acetyltransferase TERM 3356 3216041 - 3216000 - T 100 -16 -4.208 | opp_overlap 3216009, overlap 3216009 CGGCAAAACGACAAA CACCAAAAAGGGCGGCTC TTCAAG GAGCCGCCCTTTTTGTTT GCCCGCACGCCTGAC TERM 3357 3216032 - 3216009 - T 100 -15.3 -4.96106 | opp_overlap 3216009, overlap 3216000 GACAAACACCAAAAA GGGCGGCTC TTCAAG GAGCCGCCC TTTTTGTTTGCCCGC TERM 3358 3216009 - 3216032 + T 100 -16 -5.27335 | opp_overlap 3216000 3216009 GACAAACACCAAAAA GGGCGGCTCT TCAA GGAGCCGCCC TTTTTGTTTGCCCGC Bphy_2865 3216591 - 3216076 - | AsnC family transcriptional regulator TERM 3359 3216318 - 3216358 + g 71 -12.3 -3.28712 | opp_overlap 3216290 CGCCCGCGCGCCCCG GCGTGCCGTCCGCGCGTGC ACT GAGCGCGGGGCCGCCGCGC TTCTCGAGGCGCACA TERM 3360 3217165 - 3217153 - g 71 -10.5 -3.61398 | CTGGCGCGGCAAGAA CGGCG CGG CGCCG AACAGCATCGGCAAC Bphy_2866 3216746 - 3217843 + | 4-hydroxyphenylpyruvate dioxygenase TERM 3361 3217885 - 3217919 + T 87 -15.8 -3.01712 | opp_overlap 3217890, overlap 3217890 TTTAAGGTGGCAAAG AAAAAGGCGAGGACCG ATT CGATCCTCGCCTTTTC TGTTCGGAAGAGCGC TERM 3362 3217890 - 3217914 + T 100 -15.7 -4.66537 | opp_overlap 3217890, overlap 3217885 GGTGGCAAAGAAAAA GGCGAGGACCG ATT CGATCCTCGCC TTTTCTGTTCGGAAG TERM 3363 3217914 - 3217890 - T 100 -17.9 -5.27335 | opp_overlap 3217890 3217885 GGTGGCAAAGAAAAA GGCGAGGACCG ATT CGATCCTCGCC TTTTCTGTTCGGAAG Bphy_2867 3218167 - 3217979 - | hypothetical protein TERM 3364 3218268 - 3218280 + H 78 -9.1 -4.10657 | TTCTGGACCGGTTCC GCGTG TTT CACGC TTTTACACCCTGTAA TERM 3365 3218436 - 3218420 - H 81 -4.3 -5.06451 | TACCATCGCAAAAAA GCCGTCA ACA TGGCGAC CCCGGCCGAAGCATC TERM 3366 3220455 - 3220432 - g 77 -8.8 -4.27316 | gap 1, overlap 3220433 3220449 CTGCGCAACCGAAAA GCGCCGCCGCC GCA AACG-CGGCGC GTATCCCGATCCGGC TERM 3367 3221118 - 3221080 - g 71 -9.5 -3.7282 | TGAGTTCATCAAGAA TCCGAATTGGCGCTTCC CGGGC GCAAGCGCCGACGCGGA CATCCGTGCCGCGGC Bphy_2868 3218513 - 3222115 + | pyruvate ferredoxin/flavodoxin oxidoreductase TERM 3368 3222164 - 3222135 - T 88 -15.1 -3.53012 | opp_overlap 3222141, overlap 3222141 GTTGGTTGTGGCAAA GAAAAAGGGCGCC TTGC GGTGCCCTTTTTC ACGTCATCGCGCCGG TERM 3369 3222158 - 3222141 - T 93 -8.3 -5.27335 | opp_overlap 3222141, overlap 3222135 TGTGGCAAAGAAAAA GGGCGCC TTGC GGTGCCC TTTTTCACGTCATCG TERM 3370 3222141 - 3222158 + T 90 -10.5 -4.63527 | opp_overlap 3222141 3222135 TGTGGCAAAGAAAAA GGGCGCC TTGC GGTGCCC TTTTTCACGTCATCG Bphy_2869 3224473 - 3222188 - | malate dehydrogenase TERM 3371 3222593 - 3222611 + g 78 -7.4 -4.35524 | opp_overlap 3222560 3222583, overlap 3222594 3222607 AGACAGCAGCGCGAC CTTCGGCA CGA TGCCGAAC TTTTCGATTTCGCGC Bphy_2870 3226002 - 3224770 - | major facilitator transporter TERM 3372 3224890 - 3224875 - G 74 -5.4 -4.54727 | gap 1, overlap 3224876 3224877 CGCCGCAAACGAAAA CTGCGCT GCC AGCGC-G CCCACCGCCACGGGC TERM 3373 3225163 - 3225124 - G 77 -8.5 -4.31164 | gap 1, overlap 3225126 CTGATAGAACAGAAA GGCCGGC-TTGCGGCCGA AGCGG TCGGCCGCGATACCGAAC AGCCAGATGCCGGCC TERM 3374 3225430 - 3225405 - G 71 -7.4 -4.07568 | CCCGTTCGGTGAAAA GCGCCGGCTC CTCGAC GCGCCGCCGC ACGAAAAATGACGCG TERM 3375 3225451 - 3225439 - G 75 -3.3 -4.72272 | overlap 3225442 CCGCCGCACGAAAAA TGACG CGA CGGCA GGCAGCAGCCCTAAC Bphy_2871 3226347 - 3227033 + | orotate phosphoribosyltransferase TERM 3376 3227111 - 3227085 - T 100 -22.4 -4.34402 | opp_overlap 3227085 GCCTGCATACGAAAA CGCCGCCTGTCT TGA AGACAGGCGGCG TTTTTTATTGCGTAT TERM 3377 3227085 - 3227111 + T 100 -22.4 -5.49234 | opp_overlap 3227085 GCCTGCATACGAAAA CGCCGCCTGTCT TGA AGACAGGCGGCG TTTTTTATTGCGTAT Bphy_2872 3227879 - 3227172 - | two component LuxR family transcriptional regulator TERM 3378 3228100 - 3228089 - H 70 -2.2 -4.72272 | CTTGGGCACTAAAAA GGAC AACA ATCC CTCGTAAAGACAATT Bphy_2873 3228145 - 3228762 + | PEBP family protein Bphy_2874 3228872 - 3229447 + | flavodoxin/nitric oxide synthase TERM 3379 3229493 - 3229512 + F 84 -7.2 -4.8543 | gap 1, overlap 3229497 CTGTCACGCCGCTGT CACTGTTGC GGC GCAAC-GTG TTTTTCTGCCGATTC Bphy_2875 3229618 - 3230565 + | N-acetyl-gamma-glutamyl-phosphate reductase TERM 3380 3230602 - 3230633 + T 77 -10.2 -3.81339 | opp_overlap 3230608, overlap 3230608 CGCCGTCCCGCACAC GACAAAGCCGGC ATTCACGC GCCGGCTTTTTC TTTGGCTTATCAGTC TERM 3381 3230627 - 3230608 - T 75 -8.5 -4.0162 | opp_overlap 3230602 3230608 CCCGCACACGACAAA GCCGGCA TTCACG CGCCGGC TTTTTCTTTGGCTTA TERM 3382 3230608 - 3230627 + T 93 -7.8 -5.33026 | opp_overlap 3230608, overlap 3230602 CCCGCACACGACAAA GCCGGC ATTCACGC GCCGGC TTTTTCTTTGGCTTA TERM 3383 3230947 - 3230929 - T 100 -13.8 -5.81412 | GCCAGGCAAAAAAAA GCCCGCCA AGG CGGCGGGC TGAATCCATATCAGA TERM 3384 3231081 - 3231097 + T 89 -3.6 -5.63103 | overlap 3231076 GACAAAACGTCGCAC CACACC ATCTG GGCGTG TTTTTTTGCTTCGCA Bphy_2876 3231786 - 3231130 - | lysine exporter protein LysE/YggA TERM 3385 3231816 - 3231848 + r 100 -20.5 -3.53761 | opp_overlap 3231816 GCTGAAGAGAAAAAA CGGGCGGGACGGACA TTA TGCCCGCCCCGCCCG TTTCGACGCCGGTTC TERM 3386 3231848 - 3231816 - R 100 -24.9 -5.47159 | opp_overlap 3231816 GCTGAAGAGAAAAAA CGGGCGGGACGGACA TTA TGCCCGCCCCGCCCG TTTCGACGCCGGTTC Bphy_2877 3232804 - 3231935 - | 6-phosphogluconate dehydrogenase NAD-binding TERM 3387 3232666 - 3232628 - G 81 -9.5 -4.21194 | gap 1, overlap 3232630 GGCGAGCATCGAAAA GACGGCGTCGCCCGTGAA GGCT TCCGCGGGCGA-ACCGAC CACCTGCGCACCCAG TERM 3388 3232664 - 3232630 - G 74 -10.7 -3.70674 | gap 1, overlap 3232628 CGAGCATCGAAAAGA CGGCGTCGCCCGTGAA GGCT TCCGCGGGCGA-ACCG ACCACCTGCGCACCC TERM 3389 3232982 - 3232939 - g 77 -11 -3.71848 | gap 1, opp_overlap 3232944 3232948, overlap 3232940 CGCTTCTACGAAGAA TTGAACGACTTCCTGGCGCGG CCG CTGCGCC-GGCAATCGTTCAG TTGCAAGTGCGCGCG TERM 3390 3232981 - 3232940 - g 77 -14.5 -2.82895 | gap 1, opp_overlap 3232944 3232948, overlap 3232939 GCTTCTACGAAGAAT TGAACGACTTCCTGGCGCGG CCG CTGCGCC-GGCAATCGTTCA GTTGCAAGTGCGCGC Bphy_2878 3232906 - 3233661 + | hypothetical protein Bphy_2879 3233751 - 3234038 + | hypothetical protein TERM 3391 3234110 - 3234131 + T 100 -15.9 -5.5112 | opp_overlap 3234110 ACCCGAAATGCAAAA GGCCGAAGC ATCT GCTTCGGCC TTTTTTATTGCTGCG TERM 3392 3234131 - 3234110 - T 100 -15.9 -4.35926 | opp_overlap 3234110 ACCCGAAATGCAAAA GGCCGAAGC ATCT GCTTCGGCC TTTTTTATTGCTGCG Bphy_2880 3234402 - 3234193 - | hypothetical protein Bphy_2881 3234688 - 3235698 + | hypothetical protein TERM 3393 3235684 - 3235715 + T 70 -12.2 -2.71712 | overlap 3235683 ATCTCATCGGATTCG GCGGAGCCTGCCTG AACG CAGGCAGGCATGGC GTTTCCCGAAACCAG Bphy_2882 3236010 - 3235744 - | hypothetical protein Bphy_2883 3237642 - 3236467 - | major facilitator transporter TERM 3394 3237151 - 3237133 - G 73 -9.5 -3.86252 | CGCGAGCAAAGAGAA CGCGACG CACGC CGCCGCG AGCGCGAACCACGCA TERM 3395 3237382 - 3237349 - G 74 -10.1 -3.71672 | gap 1, opp_overlap 3237372, overlap 3237345 GCTCACGAAAACGAA GGCGC-TCGCGATGCC CGT GGCGACGCGCTGCGCC AACAGCGCGTTCGTA TERM 3396 3237627 - 3237610 - G 80 -8.3 -4.36931 | overlap 3237612 CAATGCATAGGAAAA GCGCGCG AGCC CGAGCGC GATCGCGCTGCCCAT TERM 3397 3238203 - 3238226 + H 100 -15.3 -4.63932 | TCATCGGGACGTTTC GCGCCACGG CTTTGA CCGTGGCGC TTTTCTTGCGAAATC Bphy_2884 3238315 - 3239265 + | diguanylate cyclase TERM 3398 3239492 - 3239506 + F 78 -4.2 -4.93696 | overlap 3239494 CTGCCAAAACGCCGC CCCATC CTT GATGTG TTTTTGATGTTTCGG TERM 3399 3240000 - 3240013 + G 79 -4.5 -4.86001 | gap 1, overlap 3239999 3240004 GGAAAAGCTGTGCCT CG-CGG CGC CCGACG TTTTTGTGCGCTACT TERM 3400 3240138 - 3240155 + G 73 -5.5 -4.38712 | overlap 3240120 GGCGCAGCAGGCGCA CCGTGAT TTCC ATCTCGG TTTTGTCACCGTCGA Bphy_2885 3239581 - 3240777 + | phytanoyl-CoA dioxygenase Bphy_2886 3240799 - 3241953 + | oxidoreductase domain-containing protein TERM 3401 3242004 - 3241976 - T 100 -19 -5.4505 | CGCTGGAAGAAAAAA GAGCCCTGTTCC GCGGG GGAACAGGGCTC GGTGGATGAGACATA Bphy_2887 3242773 - 3242507 - | hypothetical protein Bphy_2888 3242843 - 3243109 + | hypothetical protein TERM 3402 3243531 - 3243576 + G 73 -14.6 -2.52015 | overlap 3243530 CGTTGACCAGCCAGT CGCATGCCGCGCTGCTCGAT GCGTTG AACGTGCGCCGCGGCGTGCG CTTCCTCGATGTCGC Bphy_2889 3243437 - 3244258 + | methyltransferase type 11 Bphy_2890 3246187 - 3244370 - | glucosamine--fructose-6-phosphate aminotransferase, isomerizing TERM 3403 3246211 - 3246244 + r 74 -10.9 -3.5268 | gap 1, overlap 3246217 GTCCTTTGCAGAGTT GGGGGTCGTG-GCGCG TCT CGCGCACGCGTTTCCC TTAGCTTTTCTTTTT TERM 3404 3246217 - 3246238 + r 77 -10.1 -3.80083 | gap 1, overlap 3246211 TGCAGAGTTGGGGGT CGTG-GCGCG TCT CGCGCACGCG TTTCCCTTAGCTTTT Bphy_2891 3247606 - 3246245 - | UDP-N-acetylglucosamine pyrophosphorylase Bphy_2892 3248726 - 3247716 - | PP-loop domain-containing protein Bphy_2893 3249122 - 3248730 - | dihydroneopterin aldolase Bphy_2894 3250026 - 3249196 - | short-chain dehydrogenase/reductase SDR TERM 3405 3249342 - 3249309 - G 85 -16.7 -2.9914 | gap 1, opp_overlap 3249336 CATCCGCGAGATACA GCGCCGCCGCGACGAG ATC CTCGACGCG-CGACGC CCGGCCGAGCGGCGT Bphy_2895 3250040 - 3251233 + | hypothetical protein Bphy_2896 3251258 - 3251452 + | hypothetical protein Bphy_2897 3252706 - 3251453 - | polynucleotide adenylyltransferase/metal dependent phosphohydrolase TERM 3406 3251714 - 3251694 - G 71 -7.5 -4.08064 | AATGCTTCGGCAAAA CGCGCCG GCTTGCG CAGCGCG TCGCTGCGCTCGAAA TERM 3407 3251776 - 3251815 + g 77 -12.8 -3.33696 | TCACGCGATGGATGT TGCCGTGCTCGCGCGC CACCAGCA GCGCGAGATCGCGGCA TTCGTTCGGCACGCG TERM 3408 3252274 - 3252257 - G 71 -10.5 -3.63968 | overlap 3252269 GCTGAAATCCGCAAA GCGCGCC GAAA AGCGCGC GACGCGCAGAATGCG TERM 3409 3252281 - 3252269 - G 79 -10.5 -4.0896 | overlap 3252257 AAAGCGCGCCGAAAA GCGCG CGA CGCGC AGAATGCGCACGGGA Bphy_2898 3253350 - 3252703 - | glutathione S-transferase domain-containing protein Bphy_2899 3254339 - 3253383 - | NADH dehydrogenase TERM 3410 3253913 - 3253892 - G 72 -10.9 -3.46647 | overlap 3253890 CCGAGGGACGAAAGA TCGTCGACG CCAG CATCGACGA TGCGTGAATCGCGCG Bphy_2900 3256405 - 3254432 - | lytic transglycosylase catalytic Bphy_2901 3256437 - 3257048 + | 5-formyltetrahydrofolate cyclo-ligase TERM 3411 3257187 - 3257169 - T 100 -8 -5.40474 | overlap 3257171 AGCGGGCGAAAAAAA CGGCGACG CGG CGCCGCAG GCAAGCACCGCAGGC Bphy_2902 3257722 - 3257210 - | putative transcriptional regulator Bphy_2903 3257923 - 3258576 + | allophanate hydrolase subunit 1 TERM 3412 3259619 - 3259590 - g 74 -10.6 -3.73647 | GGCATGCATGAAGAA CGCTGCGCGCGC GTTGCT GCGTCCGCAGCG GTGTAAGACCAATGA Bphy_2904 3258573 - 3259625 + | urea amidolyase related protein Bphy_2905 3259642 - 3260394 + | LamB/YcsF family protein TERM 3413 3260423 - 3260443 + F 88 -15.4 -3.53012 | overlap 3260380 TCAGGCATCAGTCGA CGCCCCGC TTCAT GCGGGGCG TTTGCCAAAAGCGAC TERM 3414 3261145 - 3261165 + G 74 -11.1 -3.61398 | overlap 3261147 CGCGCGTTCTCGGCG GCGACCGAC AAC GTCGGTCTC TTCTTCGGCGAGGAC TERM 3415 3261147 - 3261163 + G 73 -12.3 -3.38812 | overlap 3261145 CGCGTTCTCGGCGGC GACCGAC AAC GTCGGTC TCTTCTTCGGCGAGG Bphy_2906 3260671 - 3261435 + | hypothetical protein TERM 3416 3261519 - 3261541 + G 73 -9.1 -3.94409 | gap 1 GTCGATCGCGACCAT CCGCGCCGCT TCAC GGCGG-GCGG TTTCTGGATCATCTA Bphy_2907 3261432 - 3262388 + | hypothetical protein TERM 3417 3262562 - 3262585 + F 71 -13.2 -2.61322 | gap 1, opp_overlap 3262559, overlap 3262561 3262560 GTTCACAGTCAACGT CCGGCGCATCA ACG TG-TGCGCCGG CTCTTTCGAGAGTCT TERM 3418 3262694 - 3262718 + G 72 -11.3 -3.53012 | CACGCTCGCGTTCGC GCTCGAAGCGC ACC GCGCCTCGCGC TTTCACGAAGCCGAA Bphy_2908 3262614 - 3263225 + | TPR repeat-containing protein Bphy_2909 3264412 - 3263219 - | GumN family protein TERM 3419 3264373 - 3264331 - G 100 -24.8 -3.14026 | opp_overlap 3264357 3264361 3264363 GACAGCCAGACGCAA CGCGCGTGCCGCCCGCACGC ATC GCGTGCAGACGGCGCGCGTG ACGGCGCGCGGGATC Bphy_2910 3265442 - 3264405 - | oligopeptide/dipeptide ABC transporter, ATPase subunit Bphy_2911 3266443 - 3265439 - | oligopeptide/dipeptide ABC transporter, ATPase subunit TERM 3420 3265505 - 3265550 + g 77 -12.6 -3.66018 | gap 3 GATGCAGCGAACCTG GGCTGCGGCGTCGTGATCG-GCC AGC GGCGCGAGCGCGG-GCCGC-GCC TTGTTGCAGTCGTCG Bphy_2912 3267362 - 3266445 - | binding-protein-dependent transport systems inner membrane component TERM 3421 3266700 - 3266676 - G 75 -7.8 -4.25848 | overlap 3266664 AATCGCCGACGAAAA GCCGAGCGTG GCCTG CACGATCAGC GGCGCCGTGCAGTTC Bphy_2913 3268463 - 3267450 - | nickel-transporting ATPase TERM 3422 3268536 - 3268495 - R 86 -5 -5.24129 | gap 1, opp_overlap 3268523 3268524, overlap 3268496 3268500 CTTGGTGAGAAAAAA CGCAACCGGCGACGAGGGC TCGTG ACCCCGGTCGCCGGAC-CA TTTCGACCAGTCTTC TERM 3423 3268532 - 3268500 - R 88 -14.8 -3.55457 | opp_overlap 3268523 3268524, overlap 3268496 3268495 TGAGAAAAAACGCAA CCGGCGACGAGGGC TCGTG ACCCCGGTCGCCGG ACCATTTCGACCAGT Bphy_2914 3270249 - 3268618 - | extracellular solute-binding protein TERM 3424 3270391 - 3270367 - R 91 -17.1 -3.48395 | opp_overlap 3270362 3270368, overlap 3270368 ACCCGCCGGATACAA CGCTGCCGCGC CAA GCGCGGCAGCT GTCTCGAATTTGAAC TERM 3425 3270390 - 3270368 - R 100 -20.6 -2.68823 | opp_overlap 3270362 3270368, overlap 3270367 CCCGCCGGATACAAC GCTGCCGCGC CAA GCGCGGCAGC TGTCTCGAATTTGAA TERM 3426 3270368 - 3270390 + r 100 -20.6 -2.9348 | opp_overlap 3270368 3270367, overlap 3270362 CCCGCCGGATACAAC GCTGCCGCGC CAA GCGCGGCAGC TGTCTCGAATTTGAA Bphy_2915 3272078 - 3270435 - | extracellular solute-binding protein TERM 3427 3272271 - 3272245 - R 100 -13.7 -5.56673 | opp_overlap 3272245 ACGCACAATAAAAAA GCGGCGCACGC CTGGC GCGTACACCGC TTCTCACGTCGGCCA Bphy_2916 3273123 - 3272293 - | 5,10-methylenetetrahydrofolate reductase TERM 3428 3272854 - 3272891 + g 86 -13.5 -3.90112 | gap 1, opp_overlap 3272853 3272854 3272880 GACGATGTGACGAAT GCCATGCGAGCGGTATTC GTT GAGAATCGCTCGCA-GGC TTTCCTTCGACGAGC TERM 3429 3273039 - 3273061 + g 83 -14.8 -3.29144 | opp_overlap 3273039 GCTTGAGCGGCAGAA GCTGCGCGCG CGT CGCACGCAGC TTCTCGAGCCCCTCC TERM 3430 3273061 - 3273039 - G 90 -17 -3.31144 | opp_overlap 3273039 GCTTGAGCGGCAGAA GCTGCGCGCG CGT CGCACGCAGC TTCTCGAGCCCCTCC Bphy_2917 3273582 - 3273142 - | membrane protein of unknown function TERM 3431 3273600 - 3273634 + r 73 -12.1 -3.15427 | gap 1, opp_overlap 3273573 GCTGCGTGCTTCATC CGGTGCGGG-GCACGC CGTG GCATGCGCCCGCACCC TTCATGCCGCCTGTT Bphy_2918 3275077 - 3273656 - | adenosylhomocysteinase TERM 3432 3273906 - 3273890 - G 78 -13.7 -3.24747 | GTTCGACATCACGAA CGACGGG TGG CCCGTCG CGCAGCCCAGGTTCA Bphy_2919 3276090 - 3275275 - | glycosyl transferase family protein Bphy_2920 3276934 - 3276212 - | LrgB family protein Bphy_2921 3277449 - 3276958 - | LrgA family protein Bphy_2922 3277563 - 3278522 + | LysR family transcriptional regulator TERM 3433 3278552 - 3278527 - T 100 -14.7 -4.78848 | opp_overlap 3278527 3278541 CGCTGAAATAGAAAA TGCCGCACGGT CTGC ACCGGGCGGCA TGCTGTCCGGCGTTG TERM 3434 3278527 - 3278552 + T 78 -14.7 -2.62933 | opp_overlap 3278527, overlap 3278541 CGCTGAAATAGAAAA TGCCGCACGGT CTGC ACCGGGCGGCA TGCTGTCCGGCGTTG Bphy_2923 3280359 - 3278587 - | OmpA/MotB domain-containing protein TERM 3435 3279553 - 3279539 - G 74 -10 -3.73224 | TGACGGCCGAGGAAA TCCGTC GCC GACGGA CAGTACGCAAGTGCG TERM 3436 3279645 - 3279699 + g 78 -13.5 -3.53091 | gap 2 ACTGCTGCGCCTTGA GC-CCGGC-GTGCCGTACTTCGCGCGC CTC GCGCGCGGGCTGCGCGACAGCCGGCGC TTTCGCGGACAACGT TERM 3437 3281200 - 3281221 + G 70 -5.1 -4.36914 | gap 1, overlap 3281184 3281202 CGCAGCCGGGTGCGA TGGTCGCGCG TTG CGC-CGGCTA TTTTCTGCACGCGCA TERM 3438 3282478 - 3282451 - g 72 -11.3 -3.53343 | gap 1 AAGGCTGTGGCGAAA GCGGAC-GCGTG TACGG CACGCTGCCCGC CGCCTTCGATCACGC Bphy_2924 3280851 - 3282524 + | acyl-CoA dehydrogenase domain-containing protein TERM 3439 3282697 - 3282670 - T 84 -12.6 -3.65812 | overlap 3282688 3282689 GTCTTGGGAACACAA CGCGCCGCGCAT CTGA AAGCGCTGCGCG CCGTGCTGCTCGACA Bphy_2926 3283639 - 3283301 - | flagellar biosynthetic protein FlhB Bphy_2927 3285012 - 3283639 - | hypothetical protein TERM 3440 3283666 - 3283687 + g 80 -13.7 -3.30124 | opp_overlap 3283661 GTCGACATCATGGCT GCCGGCGTC GTGC GATGCCGGC TTGTCAGCCGTCGCG TERM 3441 3283968 - 3284001 + g 71 -12.3 -3.19157 | gap 1, overlap 3283969 3283993 ACGGATATTCGTCAT CGGCGGACGCGGCGCC ATT GCCGCTGCG-CCGCCA TTCGTCGCCTTCCTG TERM 3442 3283969 - 3284000 + g 77 -15.8 -2.51173 | gap 1, overlap 3283968 3283993 CGGATATTCGTCATC GGCGGACGCGGCGCC ATT GCCGCTGCG-CCGCC ATTCGTCGCCTTCCT TERM 3443 3285044 - 3285069 + r 100 -15.5 -4.11692 | gap 1, overlap 3285045 GCATTGACGCTGCGT G-GCCGCTAGCG GGT CGCTAGCGGCTC TTTTGAAACTGCGTG TERM 3444 3285045 - 3285067 + r 100 -19.2 -3.65542 | overlap 3285044 CATTGACGCTGCGTG GCCGCTAGCG GGT CGCTAGCGGC TCTTTTGAAACTGCG Bphy_2928 3285421 - 3285092 - | putative flagellar protein FliT Bphy_2929 3285852 - 3285418 - | flagellar protein FliS Bphy_2930 3286563 - 3286228 - | flagellar hook-basal body complex subunit FliE TERM 3445 3286370 - 3286391 + g 74 -5 -4.4767 | GCGCCGATTTCGAAT GCGTGGGC TTCGCT GACCGCGC TTTTCTGGTCGCTGC Bphy_2931 3286802 - 3288583 + | flagellar M-ring protein FliF Bphy_2932 3288573 - 3289568 + | flagellar motor switch protein FliG Bphy_2933 3289555 - 3290232 + | flagellar assembly protein FliH TERM 3446 3290450 - 3290411 - g 77 -8.5 -4.25104 | gap 2 GCGTTCGCACGAAAA GCCTGCGAGCGCGCCGCAT CCCG AAGCGGCGC-C-CGCGAGC CGCGACTCGGCGCCC TERM 3447 3290567 - 3290605 + G 73 -14.4 -2.86164 | opp_overlap 3290560 3290555 CAACCAGATCGCGCG CCCGCTGCGCGCGTGCGG CCG CCTGACGCGTGCGGCCGG TCTCGTGCTTGAAGC Bphy_2934 3290226 - 3291869 + | FliI/YscN family ATPase TERM 3448 3292272 - 3292233 - g 75 -15.1 -2.74488 | gap 2, overlap 3292256 GAAGTACTGGAAGCA CGCGGCGTCGCCGCCGA AGCCAAGG TCG-CGGCG-CGCCGCG ATCAACGCGATGCCG Bphy_2935 3291885 - 3292334 + | flagellar export protein FliJ TERM 3449 3292370 - 3292338 - f 85 -15.5 -3.02461 | overlap 3292326 GAAGGCGCGTGAAGA CGCAGCCCGCCGCAT GAG ATGCGGCGCGCAACG GGACTGACACGACTA TERM 3450 3292482 - 3292497 + G 79 -10.4 -4.07885 | opp_overlap 3292470 GAACGGCGCGAACGC CGGCAG CGCG CTGCCG TTTTCGACCACGCTG TERM 3451 3292825 - 3292794 - g 75 -12.3 -3.50853 | gap 2 GGTTTCGAAGCAGAA CGAC-GCCGCGC-CG ACCA CGAGCGCGGCCGCCG CTGAGACTGCCGCAG TERM 3452 3293412 - 3293358 - g 86 -15.4 -3.2614 | overlap 3293359 GACCGCGGACACGAA CGCCGCGCTCGCCGCGACTCAGGCCG CAT CGGCGGCCGCCGCCGCGAGCGCGACT GCCACGCTCACTCAA TERM 3453 3293411 - 3293359 - g 89 -18.9 -2.5547 | overlap 3293358 ACCGCGGACACGAAC GCCGCGCTCGCCGCGACTCAGGCCG CAT CGGCGGCCGCCGCCGCGAGCGCGAC TGCCACGCTCACTCA Bphy_2936 3292399 - 3293910 + | flagellar hook-length control protein TERM 3454 3294037 - 3294012 - f 72 -9.8 -3.77206 | gap 1, overlap 3294015 3294016 GAGAAGGTCAGCAAA GAATGCGGCTC GCATG GAGCCGC-TTC GCCTTGCCAACGCCT TERM 3455 3294035 - 3294015 - f 71 -8.2 -4.01158 | overlap 3294012 3294016 AAGGTCAGCAAAGAA TGCGGCTC GCATG GAGCCGCT TCGCCTTGCCAACGC TERM 3456 3294034 - 3294016 - f 71 -11.7 -2.99972 | overlap 3294015 3294012 AGGTCAGCAAAGAAT GCGGCTC GCATG GAGCCGC TTCGCCTTGCCAACG TERM 3457 3294239 - 3294229 - f 80 -4.6 -4.91852 | GCCAGCAAAAACAAA CCAG AAC CCGG CAGGCAAACAAACGA Bphy_2937 3294343 - 3294846 + | flagellar basal body-associated protein FliL Bphy_2938 3294911 - 3295909 + | flagellar motor switch protein FliM TERM 3458 3296182 - 3296170 - g 70 -5.5 -4.25104 | overlap 3296171 TGGGCCGCACGAAAA TCGCG ATC CGCAA CCTGCTGCAACTCGC Bphy_2939 3295902 - 3296366 + | flagellar motor switch protein FliN TERM 3459 3296437 - 3296476 + G 78 -13.6 -3.27525 | gap 1, overlap 3296436 3296433 CGCCCGTCTCATGTC GACGGTTGCACTG-GCGTG TCT CACGCTCGGTGCAAGCGCC TTCCATTTCGCGCAC Bphy_2940 3296363 - 3296989 + | flagellar biosynthesis protein FliO Bphy_2941 3296989 - 3297834 + | flagellar biosynthetic protein FliP Bphy_2942 3297862 - 3298131 + | flagellar biosynthetic protein FliQ Bphy_2943 3298166 - 3298948 + | flagellar biosynthetic protein FliR TERM 3460 3299019 - 3299032 + T 70 -4.5 -4.43911 | gap 1 GTTCGGTTTTGGGTT CGCTGG CAT CC-GCG TTTTGCTTCCGGTTT TERM 3461 3299300 - 3299282 - T 88 -10.2 -4.4267 | CCTCAAAATGCAAAA CCGGCACC AAA GGCACCGG TCCGGTAAACAGCAC Bphy_2945 3299805 - 3299359 - | FlgN family protein Bphy_2946 3300244 - 3299903 - | anti-sigma-28 factor, FlgM Bphy_2947 3301624 - 3300350 - | flagella basal body P-ring formation protein FlgA TERM 3462 3300813 - 3300757 - G 71 -12.8 -2.98823 | gap 1, overlap 3300755 TGGCCTGCAGATACA GCGTCCAGGGACGCTCGCCCGCGCAGC GCAC GCCG-ACCGTCGTGCGGCCCCAGACGC GCGCCCCCGTCGGCA TERM 3463 3301782 - 3301771 - H 79 -7.2 -4.70659 | opp_overlap 3301772, overlap 3301772 CGTCACATGCAAAAA GGCC TTCC GGCC GGCGCAGTCGAAACG TERM 3464 3302066 - 3302031 - g 77 -5.4 -4.63218 | gap 1, overlap 3302062 GCGCGCTGAAGAAAA GCG-GCGGCTCGACG GCGGGCG CGTCGAACAACTCGC AACTCGCAATGACGC Bphy_2948 3301865 - 3302356 + | flagellar basal-body rod protein FlgB Bphy_2949 3302463 - 3302888 + | flagellar basal-body rod protein FlgC Bphy_2950 3302900 - 3303613 + | flagellar hook capping protein Bphy_2951 3303647 - 3305152 + | flagellar basal body FlaE domain-containing protein Bphy_2952 3305175 - 3305933 + | flagellar basal-body rod protein FlgF Bphy_2953 3305984 - 3306772 + | flagellar basal-body rod protein FlgG Bphy_2954 3306808 - 3307518 + | flagellar L-ring protein Bphy_2955 3307521 - 3308708 + | flagellar P-ring protein Bphy_2956 3308721 - 3309653 + | flagellar rod assembly protein/muramidase FlgJ Bphy_2957 3310048 - 3310797 + | YcgR family protein TERM 3465 3310927 - 3310958 + F 70 -2.1 -4.86731 | gap 1, overlap 3310929 3310930 TTTTGCTTCTGGTTG GCTGGCGTTGCCCC TGTGC GGGGC-ACACCTAC TTTTCTTTGCCGCGG TERM 3466 3311520 - 3311488 - f 76 -4.6 -4.86731 | overlap 3311491 CCGCGGCAAAGAAAA GTAGGTGCCGCCCC GCACA GGGGCAACGCCAGC CAACCAGAAGCAAAT TERM 3467 3311622 - 3311608 - f 81 -4.2 -5.13016 | AAGCAAAACCAAAAA GGCG TAGCCCG CGCC GAGCAGGCAAACATG TERM 3468 3313350 - 3313316 - g 70 -11.5 -3.3197 | overlap 3313305 3313302 3313319 3313336 ACATCACGGCGACAA CGACGCCCGTG-CCG TATAACC CGGCCACGGGCG-CG TCGATGACGATCACG Bphy_2958 3311800 - 3313773 + | flagellar hook-associated protein FlgK Bphy_2959 3313788 - 3315008 + | flagellar hook-associated protein 3 TERM 3469 3315044 - 3315072 + T 84 -3.7 -5.1971 | overlap 3315011 ACTTCGTCTCGGCGA CGCCTGGCTCTTT TTT GGAGGACTGGGCG TTTTTGCTTTTTGCT TERM 3470 3315289 - 3315255 - T 93 -10.9 -4.56914 | gap 1, overlap 3315260 3315279 CTATTCAAACCAAAA CCAAAGAGCCGATCTT AAAA AAGATCGGCTCTC-GA AGAAACGATTTACCG TERM 3471 3315285 - 3315260 - T 100 -16.3 -4.29472 | overlap 3315255 3315279 CAAACCAAAACCAAA GAGCCGATCTT AAAA AAGATCGGCTC TCGAAGAAACGATTT Bphy_2960 3316059 - 3315325 - | RNA polymerase, sigma 28 subunit, FliA/WhiG Bphy_2961 3316964 - 3316083 - | flagellar biosynthesis protein FlhG Bphy_2962 3318879 - 3316945 - | GTP-binding signal recognition particle TERM 3472 3318069 - 3318123 + g 73 -9.1 -3.82604 | gap 2, overlap 3318061 TGACGTGGCCCTTGT GCGCGGCGCG-CCGGGCG-GCGAGTTG CGC CGCTTCGCGCGCCCAGTCGGGCTTCGC TTCTTCGTTCACTGC TERM 3473 3319068 - 3319038 - R 90 -16 -3.53091 | ACCCGCGCCGCGAAA CGGGCGCGGCCTCC ATC GGGAGCCGCGCGCG CCAGTGAAGAAGGCC TERM 3474 3319108 - 3319077 - R 100 -18.1 -3.05384 | gap 1, overlap 3319080 GCGCGCGCCAGTGAA GAAGGCCGG-CCGC GAAAT GCGGACCGGCCTTC GAGAAAAGAAGCGCA TERM 3475 3319105 - 3319080 - R 88 -14 -3.67597 | gap 1, overlap 3319077 CGCGCCAGTGAAGAA GGCCGG-CCGC GAAAT GCGGACCGGCC TTCGAGAAAAGAAGC Bphy_2963 3321275 - 3319173 - | flagellar biosynthesis protein FlhA TERM 3476 3319293 - 3319275 - G 82 -16 -3.14132 | GCTGCGCCGCAGGAA GCGCGCGA GCA TCGCGCGC AACGAATGCTGGACC TERM 3477 3320276 - 3320286 + g 91 -8.2 -4.77036 | overlap 3320271 3320275 TCGACGTCTTGCTCT GCGC AGC GCGC TTTTTCATCGTGCGC Bphy_2964 3322507 - 3321272 - | flagellar biosynthetic protein FlhB TERM 3478 3321328 - 3321356 + g 70 -11 -3.31144 | gap 1 CCTCGGCAGCTTCCT GGCCGGCGTCGTC GTCC GAC-ACGCCGCCC TTGTCCAGCTCCGGC TERM 3479 3322397 - 3322452 + g 95 -8.1 -5.03314 | gap 1, overlap 3322384 3322397 3322405 CAGCTCGCGCGAGCG CGCAACCTGCCCCTCCTCGCGCGCCT TTTCC AGGCGC-CGGGGGGTGGCTGATTCGG TTTTTTCGAGGTCGC TERM 3480 3322397 - 3322451 + g 74 -11.4 -3.61506 | gap 2, overlap 3322384 3322397 3322405 CAGCTCGCGCGAGCG CGCAACCTGCCCCTCCTCGCGCGCCT TTTCC AGGCGC-CGGGGGGTGGCTGATT-CG GTTTTTTCGAGGTCG TERM 3481 3322405 - 3322444 + g 80 -15.7 -2.8838 | gap 1, overlap 3322384 3322397 3322397 GCGAGCGCGCAACCT GCCCCTCCTCGCGCGCCT TTTCC AGGCGC-CGGGGGGTGGC TGATTCGGTTTTTTC TERM 3482 3322499 - 3322511 + g 88 -9.1 -4.65895 | GCTCTCCAGCTGGAA GGGCA ACA TGCCC TTTTTCAGTGAGAGC Bphy_2965 3323960 - 3322692 - | hypothetical protein Bphy_2966 3324543 - 3323977 - | hypothetical protein Bphy_2967 3325615 - 3324896 - | chemotaxis phosphatase, CheZ TERM 3483 3325019 - 3325048 + g 73 -12.1 -3.32844 | GCCCGTCGGCGACAT CGGCTCGTGCTGG GCTT CCGCCACGAGCTG TTGTGCCGTCGCGGC Bphy_2968 3326012 - 3325617 - | response regulator receiver protein Bphy_2969 3327188 - 3326085 - | response regulator receiver modulated CheB methylesterase TERM 3484 3326764 - 3326809 + g 71 -11.8 -3.21395 | overlap 3326762 GACGCCGGCGCATGC TGCGCGGGCGCGGCCTG-GCGC ACGC GCGCGCGGGCTGCGGC-GCGGA TCTTGTCGGCGAGCT Bphy_2970 3327985 - 3327194 - | hypothetical protein Bphy_2971 3328923 - 3327982 - | MCP methyltransferase, CheR-type TERM 3485 3328722 - 3328754 + g 87 -17.6 -2.90763 | opp_overlap 3328717 3328739 GGCGGAACGAGTCGA GCCCGCGCGCGCGC AAACG GCGCGCGAGCCGGC TGTATGCCATGTCCC TERM 3486 3329062 - 3329097 + r 80 -10.3 -4.07107 | opp_overlap 3329061, overlap 3329092 3329093 3329094 CCTGCTTTCAACCAT GCTGCCCGCGGCGCG ATCGAG CCTGCCGTGTGCAGC TTTCTGCTGTGTTCT Bphy_2972 3331017 - 3329224 - | methyl-accepting chemotaxis sensory transducer TERM 3487 3329287 - 3329305 + g 74 -11.6 -3.61517 | TCGCGGCGCCGGTTC GGCGGCCG CCG CGGGCGCC TTCTTCACCACGGGT TERM 3488 3329378 - 3329406 + g 72 -11.6 -3.54307 | GGTTGCGCAGGAGCC GGCGCCTTCGCG GCATG CGCGACGGCGGC TTTCACGCGGCTCTT TERM 3489 3330660 - 3330688 + g 100 -19.7 -3.65201 | CGCGCTTCGCGACCA CGGCGTCGATCAG CGA CTGATCGATGCCG TTCTTCGGGGTGTTC Bphy_2973 3331598 - 3331071 - | CheW protein TERM 3490 3331107 - 3331119 + g 70 -5.5 -4.24204 | CAATGCCATTTCCCG GCTGG TCA TCAGC TTTTCGATGTCCATC TERM 3491 3331648 - 3331676 + r 71 -10.1 -3.60792 | TCGGTTTCACGCGAG CGAGAGCGCCGCA CCG TGCGACGCCCGCG TTTCGCGGTTCAGCG Bphy_2974 3333957 - 3331639 - | CheA signal transduction histidine kinase TERM 3492 3332853 - 3332886 + g 71 -13.1 -2.94144 | gap 1, overlap 3332850 CGGCCGCTGCCGGAC GCGCCTTGCGATCGCC TTC GGCGGATGCA-GGCGC TGCTTTCGGTGCGGA TERM 3493 3333512 - 3333569 + g 71 -10.4 -3.57144 | gap 2 ACTGCCACAGCGGGC GCTGCCACG-GGTGCC-GGCGCTGCAGC GGGT GCGGCGGCGGCAGGCACTTCGCCGCGGC TTTCGGCGTGCAGGC Bphy_2975 3334393 - 3334031 - | response regulator receiver protein Bphy_2976 3335572 - 3334463 - | OmpA/MotB domain-containing protein TERM 3494 3334511 - 3334541 + g 84 -14.6 -3.42459 | overlap 3334512 GTCAGCCGCGCCCTG TGCGGCTGCCGCCG CTT CGACGGTAGCCGCC TTGCTCTTCTCCATC TERM 3495 3334512 - 3334540 + g 86 -18.1 -2.64993 | overlap 3334511 TCAGCCGCGCCCTGT GCGGCTGCCGCCG CTT CGACGGTAGCCGC CTTGCTCTTCTCCAT TERM 3496 3335498 - 3335518 + g 72 -9 -4.15044 | gap 1 GTACGCGAGCTTCCA GGC-GCCAC CGTG GTGGCCGCC TTTCTTCGGCGCGGC Bphy_2977 3336445 - 3335585 - | chemotaxis protein MotA TERM 3497 3336451 - 3336439 - G 70 -5.5 -4.25104 | GTGTTCCCACGAAAA TCAGC ACT GCCGA GCCCTCACGAAAAGC TERM 3498 3336482 - 3336465 - R 74 -6.9 -4.2558 | opp_overlap 3336466, overlap 3336466 GAGCCCTCACGAAAA GCGACGG GAGA CCGTCGT TATTCAGGTTTACGG TERM 3499 3336466 - 3336481 + r 75 -10.4 -3.70919 | opp_overlap 3336466 3336465 AGCCCTCACGAAAAG CGACGG GAGA CCGTCG TTATTCAGGTTTACG Bphy_2978 3337217 - 3336606 - | flagellar transcriptional activator FlhC TERM 3500 3337290 - 3337275 - R 93 -11.8 -4.26189 | CGAGAAACGGTAAAA GCGCCG TCGC CGGCGC GCGTAGGGTGGCTTG Bphy_2979 3337667 - 3337347 - | flagellar transcriptional activator TERM 3501 3337758 - 3337738 - H 87 -3.9 -5.40072 | opp_overlap 3337746 3337747, overlap 3337745 3337746 TCGCGTTTAAAAAAA CCACGAACG GCA CGCTTATGG TCAGCGTGCATTTTC TERM 3502 3338924 - 3338893 - g 72 -8.6 -4.07885 | opp_overlap 3338919, overlap 3338916 TATCTGTCCCGAAAA GCGCGTCGATACCG CCAT CAAGATCGCCGCGC AAAGCGGTTTGCCGC Bphy_2980 3338339 - 3339403 + | glycosyl transferase group 1 TERM 3503 3339502 - 3339529 + T 82 -10.6 -4.23892 | opp_overlap 3339507, overlap 3339507 CGGATCGCTTGCACT AAAAAGCCGCCT CCCC GGGCGGCTTTTC TTTTCCGTCGTTCAA TERM 3504 3339507 - 3339524 + T 100 -10.5 -5.10933 | opp_overlap 3339507, overlap 3339502 CGCTTGCACTAAAAA GCCGCCT CCCC GGGCGGC TTTTCTTTTCCGTCG TERM 3505 3339524 - 3339507 - T 93 -9.8 -4.72272 | opp_overlap 3339507 3339502 CGCTTGCACTAAAAA GCCGCC TCCCCG GGCGGC TTTTCTTTTCCGTCG Bphy_2981 3340006 - 3339704 - | histone family protein nucleoid-structuring protein H-NS TERM 3506 3340611 - 3340636 + G 71 -9.1 -3.74158 | gap 1 GGCGCGTATGTGCTG TCCGTGATTGCT TCG GGCAATC-CGGA TTTCCATCTGGTTGC Bphy_2982 3340296 - 3341045 + | MIP family channel protein TERM 3507 3341068 - 3341097 + T 95 -17.9 -3.59202 | opp_overlap 3341073, overlap 3341073 CTATCCAGTCTGCGT GAAAACGGGGCGC TTCG GCGCCCCGTTTGC TTGTATGTCCAAATG TERM 3508 3341073 - 3341092 + T 100 -16.4 -4.06361 | opp_overlap 3341073, overlap 3341068 CAGTCTGCGTGAAAA CGGGGCGC TTCG GCGCCCCG TTTGCTTGTATGTCC TERM 3509 3341092 - 3341073 - T 100 -16.4 -4.07885 | opp_overlap 3341073 3341068 CAGTCTGCGTGAAAA CGGGGCGC TTCG GCGCCCCG TTTGCTTGTATGTCC TERM 3510 3341199 - 3341225 + T 100 -15.9 -4.21607 | overlap 3341183 3341184 CGGCCGATGTAGCAT GGCGCGTTTCC CGCAC GGGAACGCGCC TTTCTATTGGATCGA Bphy_2983 3342067 - 3341246 - | Cof-like hydrolase Bphy_2984 3343066 - 3342170 - | ATPase BadF/BadG/BcrA/BcrD type Bphy_2985 3343206 - 3343802 + | DNA-3-methyladenine glycosylase I TERM 3511 3344014 - 3344027 + F 72 -9.5 -3.72984 | opp_overlap 3343993 3344009, overlap 3343993 3344023 GCCAACACAACGGCT GGCCC TTTT GGGCC TTTCGCTCGTTATAA Bphy_2986 3344256 - 3344681 + | hypothetical protein TERM 3512 3344747 - 3344794 + T 82 -14.3 -2.92613 | opp_overlap 3344754, overlap 3344744 3344792 TTCCAAAGTTCCAAA CGAAAAACGGCGGTGTG-GCTTC TTTC GAAGCTCACACCGCCGTTGG-CG TGCTTTCGCGTGGAA TERM 3513 3344788 - 3344754 - T 100 -20.9 -4.98531 | gap 1, opp_overlap 3344747 3344744 GTTCCAAACGAAAAA CGGCGGTGTG-GCTTC TTTC GAAGCTCACACCGCCG TTGGCGTGCTTTCGC Bphy_2987 3345028 - 3344816 - | ribosomal protein S21 TERM 3514 3344898 - 3344909 + g 72 -7.2 -4.26076 | TTCTTGCGCTTACGA GCCG TCGT CGGC TTTTCGTACGCCTGG Bphy_2988 3346265 - 3345324 - | aldo/keto reductase TERM 3515 3345666 - 3345650 - G 71 -13.7 -2.67515 | opp_overlap 3345665, overlap 3345647 TGTAGTAGCAGACCA CGCCGAG CCG CTCGGCG AGCGCGACCGGTTCG TERM 3516 3346182 - 3346170 - G 75 -7.7 -4.21194 | overlap 3346174 GTCGAGGATCGAAAA CGAAG TCG CTTCG TCGGCCGTCCAGCCG Bphy_2989 3346494 - 3347312 + | flagellin domain-containing protein TERM 3517 3347401 - 3347431 + F 73 -12.7 -2.71712 | gap 1, overlap 3347400 AAAAACAGCTGGATC GCATGGTTGGGAGG CTCG CCTCCC-ATCATGC ATTTGAACGCCGAGA TERM 3518 3348125 - 3348088 - g 81 -12.7 -3.65351 | gap 1 TGACCTCGACCCAAA CGGGCGCCGCCAACACCG TAT CGATATCGGCGG-GCGCG GGCCTCGATGCCGGC TERM 3519 3348620 - 3348590 - g 77 -13.3 -3.30441 | gap 1, opp_overlap 3348610, overlap 3348607 GACGACGCTGGAGAA CGCG-CTGTCGAGC AACA GCTCGACCGTCGCG GCCGTGTTCAACACG Bphy_2990 3347484 - 3348911 + | flagellar hook-associated 2 domain-containing protein Bphy_2991 3348941 - 3349234 + | hypothetical protein TERM 3520 3349294 - 3349309 + T 100 -9 -6.06723 | opp_overlap 3349294 GCGCGGATTGACAAA GCTGCA GCGA TGCAGC TTTTTTTTTCGCCCG TERM 3521 3349309 - 3349294 - T 72 -9 -3.91897 | opp_overlap 3349294 GCGCGGATTGACAAA GCTGCA GCGA TGCAGC TTTTTTTTTCGCCCG TERM 3522 3349355 - 3349387 + T 77 -11.9 -3.53811 | TCTGCGCAGCGAGGT CCGCGATTGCGCCTC ACG GCCGCGCAATCGCCG TTTCAAGGCGCTGCG Bphy_2992 3351880 - 3349406 - | TPR repeat-containing protein TERM 3523 3350525 - 3350483 - G 95 -16.3 -4.03413 | ATCGCCCGAGACAAA GCCCACGCGCA-GCGGCCGCG AGC CGC-GCGGCATGCGCGTGTGC GTGAACGGCGTGACG TERM 3524 3350634 - 3350624 - G 70 -4.6 -4.36914 | overlap 3350627 GCTTGCCTCACAAAA CAGC AAT GCCG TGTGCGCGACGTCGG TERM 3525 3351008 - 3350993 - G 75 -11.8 -3.54543 | ACGGACTTGCGCAAA CGGCGC CGCC GCGCCG CCCCGGTACGAGTCG Bphy_2993 3354262 - 3351893 - | TPR repeat-containing protein TERM 3526 3352055 - 3352005 - G 87 -14.5 -3.64703 | gap 1, opp_overlap 3352026 3352044 3352051 3352054 GTCTGCGCACGCAAA CGCGCGCGCA-GGACGGCGAGGCG CTCC CGCTGCGCGGCCCACGCGCTCGCG AGTGCGATGTATTCG Bphy_2994 3355488 - 3354283 - | methyltransferase type 12 TERM 3527 3354627 - 3354647 + g 86 -14.7 -3.55444 | TCAGTTGCGACAGTT GCTGCGCGA TCG TCGCGCGGC TTTCGACCGTGCGGG TERM 3528 3355081 - 3355051 - G 74 -10.3 -3.72893 | overlap 3355038 CAGGCGCGGATGAAA CTCGACGCCGAGG CCCGT CTCCGGCGTCGCG TTAGGATCGAAACCG Bphy_2995 3356426 - 3355485 - | NAD-dependent epimerase/dehydratase Bphy_2996 3358303 - 3356423 - | TPR repeat-containing protein Bphy_2997 3360426 - 3358300 - | TPR repeat-containing protein TERM 3529 3359763 - 3359785 + g 87 -17.7 -2.8294 | opp_overlap 3359761, overlap 3359761 CGCGGCGATACGACT CGGCCGCGC CCGCT GCGCGGCCG TACTTCTCCAGAATG Bphy_2998 3361150 - 3360461 - | TPR domain-containing protein TERM 3530 3361433 - 3361421 - H 100 -9.1 -5.75945 | ACGGCGCAAAAAAAA CCGCT TTG AGCGG GTGTCGGGCAGCGGT TERM 3531 3362445 - 3362491 + G 73 -12 -3.40403 | opp_overlap 3362408, overlap 3362446 CAGCCCGCCGCGGCT CCGGCAGGCGCGTCGGGTGCCG CGG CTGCATCCGGCGCGCAGGCGGC TTCTGGTGCAACGCC TERM 3532 3362446 - 3362490 + G 77 -15.5 -2.64099 | opp_overlap 3362408, overlap 3362445 AGCCCGCCGCGGCTC CGGCAGGCGCGTCGGGTGCCG CGG CTGCATCCGGCGCGCAGGCGG CTTCTGGTGCAACGC Bphy_2999 3361920 - 3362879 + | cytochrome c class I TERM 3533 3362927 - 3362909 - T 83 -11.7 -3.88232 | opp_overlap 3362909, overlap 3362883 TCCGGCACACAACAA TCCCCGC CCTGT GCGGGGA TTTTTTCTTATGCCT TERM 3534 3362909 - 3362927 + T 100 -11.7 -5.56673 | opp_overlap 3362883 3362909 TCCGGCACACAACAA TCCCCGC CCTGT GCGGGGA TTTTTTCTTATGCCT Bphy_3000 3365130 - 3362935 - | UvrD/REP helicase TERM 3535 3363764 - 3363721 - G 75 -12.5 -3.53012 | gap 2, opp_overlap 3363726 3363730 GGCCTGTCCCGCAAA CGCGCCGAGCGCTTCGAGC GTCGTATT GC-CGACGC-CTCGGCGCG GCGTCGTGATCGCGC TERM 3536 3364877 - 3364887 + g 82 -6.8 -4.68908 | GCGGCGATATGGCGC GGCT CGA AGCC TTTGTTTTCGATCAG TERM 3537 3365297 - 3365345 + H 100 -14.3 -4.07568 | opp_overlap 3365311 3365312 GCATGGCGGGAAGCG CCGCCGTGCCACAATTGCGGCGT TGC GCGCCGCCCCCGTGGCGCGCCGG TTTTGCACGGAACAC Bphy_3001 3365363 - 3366412 + | oxidoreductase domain-containing protein TERM 3538 3366480 - 3366515 + F 72 -6.2 -4.3898 | gap 2, overlap 3366481 TCTTGCTCCCGCCTC TGTT-GCGCCCT-CGG TCGCTT CCGCAGGGCGCGAACC TTTTGTCCCGCTGAT Bphy_3002 3366543 - 3366902 + | putative lipoprotein TERM 3539 3366923 - 3366968 + F 100 -14 -5.78622 | ATCGCGTGCGCCTGC TGCCGCACGGCG-CGTACGCCG CCTG CCGCGCGCGTCGCC-TGCGGCA TTTTTTTTGAAATCA TERM 3540 3367961 - 3367926 - g 74 -4.8 -4.57341 | gap 3, overlap 3367927 3367928 AACGCGCGCGAAAAA GTCTGGGCGACG-GTGC CGCAT GCACGCGCCGCC-AG-C GAAGCGCTCAAGCCG Bphy_3003 3367449 - 3368567 + | glycine cleavage system T protein Bphy_3004 3368684 - 3369064 + | glycine cleavage system H protein TERM 3541 3369114 - 3369082 - f 100 -24.2 -2.81133 | CACTTACCCACGACA GGCGCGGCGCTCGC CGCTC GCGAACGCCGCGCC GGCAGGAACACTCAA TERM 3542 3370461 - 3370423 - g 87 -14.5 -3.64703 | overlap 3370450 GTCGCGTGAGCGAAA CGCGCGTCGGCCTGTCG ATCGA CGAAACGACGACGCGCG CCGACCTCGCCGATC Bphy_3005 3369129 - 3372059 + | glycine dehydrogenase TERM 3543 3372105 - 3372145 + T 100 -21.4 -3.64703 | opp_overlap 3372107 3372112, overlap 3372112 3372143 TGCAACAGCAGACAT GACAAAACCCGGTGACGA TCGAC TCGTCACCGGGTTTTTTC TTTGCATCGCGACGG TERM 3544 3372143 - 3372107 - T 100 -18.2 -2.72954 | opp_overlap 3372105 3372112, overlap 3372112 CAACAGCAGACATGA CAAAACCCGGTGACGA TCGAC TCGTCACCGGGTTTTT TCTTTGCATCGCGAC TERM 3545 3372112 - 3372138 + T 100 -18.1 -5.65927 | opp_overlap 3372112 3372107, overlap 3372105 GCAGACATGACAAAA CCCGGTGACGA TCGAC TCGTCACCGGG TTTTTTCTTTGCATC TERM 3546 3372138 - 3372112 - T 100 -18.1 -4.53163 | opp_overlap 3372105 3372112, overlap 3372107 GCAGACATGACAAAA CCCGGTGACGA TCGAC TCGTCACCGGG TTTTTTCTTTGCATC Bphy_3006 3374212 - 3372167 - | methyltransferase type 12 TERM 3547 3372956 - 3373012 + g 79 -11.3 -3.86822 | overlap 3372931 3372934 GCTGGCGAGTGCCTG CGCGACGCGCACCGACGCCATGCCGTC GCC GTCGTTATGGTTATAGTGCGCGGCGCG TTTCTGACCCAGTTG Bphy_3007 3375498 - 3374209 - | methyltransferase type 11 TERM 3548 3375408 - 3375434 + g 71 -7.3 -4.14739 | gap 1, overlap 3375408 3375411 TCGAATACCAGTTCA CC-ATGCCGGGA TCTT TCCAGGCATCGG TTTTCCACTGGATCA Bphy_3008 3376547 - 3375495 - | N-acylneuraminate-9-phosphate synthase TERM 3549 3375724 - 3375748 + g 71 -10 -3.64703 | overlap 3375738 CCATAGGCTGGTTGG CCGAGCGC CTGCCATGC GCGCTCGG TTTCCGTCACCAGCG TERM 3550 3375738 - 3375769 + g 71 -8 -4.16842 | gap 1, overlap 3375724 GCCGAGCGCCTGCCA TGCGCGCTC-GGT TTCCGTC ACCAGCGCGCGCA TTTCTTCAGGCTCCA TERM 3551 3376086 - 3376134 + g 76 -9.1 -4.09685 | gap 4 GCCCGTGGAGATGAT CATCGGTTTGCC-C-G-TCGCGGCG ACG CGCCG-GATCAGCGGCAAATCGGTG TTTTCGAAGCTGGCG TERM 3552 3376214 - 3376186 - G 83 -9.7 -4.37092 | gap 1 AGCGTTTCGAGAAAA TCGACAGCCGTT TCGTCG AACGGC-GTCGA GAACGCGAGCATGCC TERM 3553 3376313 - 3376326 + g 75 -3.7 -4.63932 | opp_overlap 3376295 3376304, overlap 3376311 CGTAAAGCGATTTGC CCGCC CACA GGCTG TTTTCTTCGCCGATA Bphy_3009 3377332 - 3376631 - | acylneuraminate cytidylyltransferase TERM 3554 3376823 - 3376805 - G 75 -4.4 -4.63218 | opp_overlap 3376805 3376809 GCGGCCCCAATAAAA CTGGCCGG CGT CATGCCAG GTTTCCGGCAGGTCC Bphy_3010 3378495 - 3377329 - | DegT/DnrJ/EryC1/StrS aminotransferase Bphy_3011 3379487 - 3378492 - | polysaccharide biosynthesis protein CapD Bphy_3012 3380181 - 3379561 - | formyl transferase domain-containing protein TERM 3555 3379729 - 3379699 - G 77 -11.1 -3.72576 | GCTCGCGCGATGAAA CGTGCCCGCGC-CGC TTT GCGCGCGCGG-CGCG ATATGCCCGTCGCGC TERM 3556 3380472 - 3380482 + G 72 -8.2 -4.07568 | opp_overlap 3380456 3380453 CTCGCGCGACACCGT CGGC GAT GCCG TTTTCACCCGGAGCA Bphy_3013 3380188 - 3380784 + | hypothetical protein TERM 3557 3380953 - 3380981 + F 83 -13.7 -3.34517 | overlap 3380955 3380956 CGCGTTGGTCGCAGG CGGCGCGGGCGCG GGC CGTGCCCGCCGCG TGTTTCGCCGCCCGT TERM 3558 3380955 - 3380980 + F 78 -14.7 -2.60496 | gap 1, overlap 3380953 3380956 CGTTGGTCGCAGGCG GC-GCGGGCGCG GGC CGTGCCCGCCGC GTGTTTCGCCGCCCG TERM 3559 3380956 - 3380983 + F 74 -11.2 -3.53444 | gap 1, overlap 3380955 3380953 GTTGGTCGCAGGCGG CGCGGGCGCGGGC CGT GCCCGC-CGCGTG TTTCGCCGCCCGTCG TERM 3560 3382104 - 3382077 - g 79 -6.2 -4.62069 | gap 1, overlap 3382078 GTGGGATCCGAAAAA TGCGGCCGAGCTG TAT CACCTCG-CCGCG CGGCTCGACGGACGC Bphy_3014 3381061 - 3382197 + | hypothetical protein TERM 3561 3383146 - 3383130 - g 84 -7.2 -4.78572 | CGTCAATGAAGAAAA CGCAGC GGGCG GCCGCG TGGTCACCGCGCCGA Bphy_3015 3382282 - 3383670 + | L-serine dehydratase 1 TERM 3562 3383801 - 3383831 + G 79 -10.5 -4.19817 | overlap 3383801 ACGGCTCATGGTCGA CGCGCTGCT-GACGC ATG GCGTCGAGC-GCGTG TTTTGCGTGCCTGGC TERM 3563 3383801 - 3383829 + G 80 -11.8 -3.6993 | gap 2, overlap 3383801 ACGGCTCATGGTCGA CGCGCTGCTGACGC ATG GCGTC-G-AGCGCG TGTTTTGCGTGCCTG Bphy_3016 3383745 - 3385445 + | thiamine pyrophosphate binding domain-containing protein TERM 3564 3385660 - 3385633 - T 100 -12 -5.47846 | AAGCAAAAAACAAAA GCCTCGCAGAGC AAAA ACCCTACGAGGC TTCCACAAAATCAGC Bphy_3017 3386869 - 3385721 - | extracellular ligand-binding receptor TERM 3565 3386896 - 3386928 + r 81 -4.1 -5.09895 | gap 2, overlap 3386897 GGTACCAGGTGTGGA CGGCGCGGTGATCGG GGTCG CCG-TC-TCGCGCCA TTTTTTGAATCGATC Bphy_3018 3390919 - 3386957 - | delta-1-pyrroline-5-carboxylate dehydrogenase TERM 3566 3391027 - 3390997 - H 100 -10.4 -5.06414 | CCCTCCCAATAAAAA GGTGCAACCAGTTC GGC GAGACGGTTGCACC CCTCTGAAAGCCTTA Bphy_3019 3391227 - 3391385 + | hypothetical protein Bphy_3020 3391680 - 3391441 - | hypothetical protein Bphy_3021 3393098 - 3391677 - | hypothetical protein Bphy_3022 3395538 - 3393280 - | primosomal protein N' Bphy_3023 3397116 - 3395980 - | uroporphyrinogen decarboxylase TERM 3567 3396899 - 3396864 - G 75 -3.9 -4.61482 | gap 1, opp_overlap 3396884, overlap 3396865 3396866 TGTCGGAAAAAAGAA TGGCGGCG-TCGAGCG GATAG CGCTCGAGCGGCTGCA GCGTAACTTCCGTCG TERM 3568 3397835 - 3397856 + G 71 -10.1 -3.61398 | opp_overlap 3397834 AAAGGCCGACGTAAT GGTCACGGA CGCG TCCGAGACC TTGTTGCAGCAAAAG TERM 3569 3397946 - 3397929 - g 72 -8.3 -4.07124 | opp_overlap 3397941 CAGTATGGAGAGAAA GCGTGGC TGGT GCCGCGC GGCGATGTGGTATTC Bphy_3024 3397260 - 3398042 + | arogenate dehydratase TERM 3570 3398427 - 3398399 - T 74 -2.3 -5.00616 | gap 1, opp_overlap 3398383, overlap 3398400 3398401 CGCGTGCGCAAAAAA TCCCGCCGCGCC TTATCT GGCG-GGCGTTA CAACCTGAAACACTT TERM 3571 3398618 - 3398643 + T 79 -6.8 -4.57569 | TTCCTCCAATGGTCT CCTCGCGCTA ACCCCG TAGCGTGTGG TTTTTAGCGGGCTCC TERM 3572 3398650 - 3398666 + T 100 -11.5 -6.35605 | AGCGTGTGGTTTTTA GCGGGCT CCA GGCCCGC TTTTTTTTTGTCTTG TERM 3573 3398745 - 3398767 + T 100 -14.9 -4.93696 | opp_overlap 3398725 3398745 CGCCTGAAAGCGAAA CGCCGTGTG GCCTG CACACGGCG TTTTTGGTGTTTGCG TERM 3574 3398767 - 3398745 - T 100 -14.9 -3.84451 | opp_overlap 3398745, overlap 3398725 CGCCTGAAAGCGAAA CGCCGTGTG GCCTG CACACGGCG TTTTTGGTGTTTGCG TERM 3575 3398798 - 3398808 + T 70 -2.4 -4.76274 | GCCGAGATCCGTGCC CCGC TAC GCCG TTTTGTCTTCCTTTA Bphy_3025 3400531 - 3398801 - | AMP-dependent synthetase and ligase TERM 3576 3400701 - 3400717 + r 75 -9.4 -3.82083 | opp_overlap 3400701 AATCGGCAAAAAAAA GCAGCC ACGAG GGCTGC TTTCGATTGTGCTGC TERM 3577 3400717 - 3400701 - R 100 -9.4 -5.77853 | opp_overlap 3400701 AATCGGCAAAAAAAA GCAGCC ACGAG GGCTGC TTTCGATTGTGCTGC Bphy_3026 3401158 - 3400733 - | ATP synthase F1, epsilon subunit Bphy_3027 3402704 - 3401310 - | ATP synthase F1, beta subunit Bphy_3028 3403682 - 3402795 - | ATP synthase F1, gamma subunit Bphy_3029 3405314 - 3403773 - | ATP synthase F1, alpha subunit Bphy_3030 3405912 - 3405373 - | ATP synthase F1, delta subunit Bphy_3031 3406385 - 3405915 - | ATP synthase F0, B subunit TERM 3578 3406002 - 3406041 + g 77 -12 -3.64599 | gap 1 TTCGGCACCCTTCAC GGCGAGCGCGGCGACTTCG CCA CGCAG-CGCTTCGCGCGCC TTTACGATCTGCTGG Bphy_3032 3406793 - 3406524 - | ATP synthase F0, C subunit Bphy_3033 3407731 - 3406880 - | ATP synthase F0, A subunit Bphy_3034 3408423 - 3407878 - | ATP synthase I chain TERM 3579 3408748 - 3408712 - R 70 -3.6 -4.63542 | gap 1, overlap 3408717 CACAAGTGTCAAAAA TGCAACAGCAACCACGC GCCG GCGAGGCCGCTGACG-A CCCAAAACGGGATCG TERM 3580 3408744 - 3408717 - R 73 -11.2 -3.45031 | overlap 3408712 GTGTCAAAAATGCAA CAGCAACCACGC GCCG GCGAGGCCGCTG ACGACCCAAAACGGG Bphy_3035 3409853 - 3408705 - | citrate transporter Bphy_3036 3410798 - 3409866 - | parB-like partition protein TERM 3581 3410451 - 3410507 + g 79 -7.1 -4.56597 | gap 1, opp_overlap 3410461 3410482, overlap 3410452 CAGTACAGGCACTTC GTCGAGACCAGC-CAGGCGCGCCGCG CGAAAA CGCCGCTCGCCAGCGATGATCTCGAA TTTTTCAGGCGACAC Bphy_3037 3411565 - 3410795 - | cobyrinic acid ac-diamide synthase TERM 3582 3411532 - 3411555 + g 72 -3.2 -4.69464 | gap 1, overlap 3411533 TTTTGCCGACTCCAC CCTTCTG-GTT CGC AACGCAGAAGA TTTTTGCCATCTTTT Bphy_3038 3412292 - 3411615 - | methyltransferase GidB Bphy_3039 3414247 - 3412289 - | glucose inhibited division protein A TERM 3583 3413803 - 3413777 - G 70 -10.9 -3.33696 | gap 1, overlap 3413794 CTTCCCGTCAAGGAA CGTGCCGGCCGT CAAA ACGAC-GGCACG CGAGCGAAAACGGAC TERM 3584 3414354 - 3414381 + r 82 -14.2 -2.90496 | opp_overlap 3414355 3414376, overlap 3414351 CGGCATAAAAAAAAA ACGGCGTGTTTC ACGT GAAACACGCCGC TCATTTGACAGCGAA TERM 3585 3414380 - 3414355 - R 100 -17.7 -6.48081 | opp_overlap 3414354 3414351, overlap 3414376 GGCATAAAAAAAAAA CGGCGTGTTTC ACGT GAAACACGCCG CTCATTTGACAGCGA Bphy_3040 3415178 - 3414417 - | ABC transporter related Bphy_3041 3416962 - 3415178 - | ABC transporter related Bphy_3042 3418022 - 3416967 - | inner-membrane translocator TERM 3586 3418150 - 3418118 - R 93 -8.4 -4.74013 | gap 1, opp_overlap 3418144, overlap 3418121 CCGAAACACATAAAA CAACTGCCGCGCC CAAGATAC GGCGCGGCAGA-G CTTGCCATTGTTATC TERM 3587 3418148 - 3418121 - R 100 -15.6 -4.45187 | opp_overlap 3418144, overlap 3418118 AAACACATAAAACAA CTGCCGCGCC CAAGATAC GGCGCGGCAG AGCTTGCCATTGTTA Bphy_3043 3419404 - 3418244 - | extracellular ligand-binding receptor TERM 3588 3419611 - 3419631 + r 75 -5.4 -4.614 | opp_overlap 3419611, overlap 3419606 CGTGCAATAAAAAAA GACGCG TCAGCTGCC CGCGTC TTTTGTCTGGTTCGA TERM 3589 3419631 - 3419611 - R 100 -5.4 -5.7946 | opp_overlap 3419611 3419606 CGTGCAATAAAAAAA GACGCG TCAGCTGCC CGCGTC TTTTGTCTGGTTCGA TERM 3590 3420898 - 3420881 - R 81 -12.7 -3.54424 | TTGGAGTCTTCGAAA GCCGACC CAAT GGTCGGC GAATGGCGAGTGTAG TERM 3591 3421100 - 3421074 - R 100 -14.5 -5.1417 | opp_overlap 3421074 GCAGAAAAGTAAAAA GCGCTGCTGGA GCCAG TCCAACAGCGC TTTTGTATGGGCACT TERM 3592 3421074 - 3421100 + r 100 -12.3 -4.52857 | opp_overlap 3421074 GCAGAAAAGTAAAAA GCGCTGCTGGA GCCAG TCCAACAGCGC TTTTGTATGGGCACT Bphy_3045 3422304 - 3421333 - | inner-membrane translocator Bphy_3046 3423188 - 3422304 - | inner-membrane translocator TERM 3593 3423258 - 3423211 - R 100 -15 -3.84451 | overlap 3423193 GTCGTCAAAGTGAAA GCG-GCATGCACGTGTCAGGCC GGCGAT GGCCCGACACGTCCA-GCACGC AGAACATCGACGCCC Bphy_3047 3424533 - 3423319 - | extracellular ligand-binding receptor TERM 3594 3424127 - 3424148 + g 74 -14.5 -2.6381 | TGCTCGTTGGTGAGC GTATCGGCG CCTG CGCCGATAC TGATGTAGACCTTGT Bphy_3048 3425349 - 3424594 - | ABC transporter related Bphy_3049 3426137 - 3425346 - | ABC transporter related TERM 3595 3425519 - 3425540 + g 89 -5.1 -5.14563 | gap 1, overlap 3425522 TGTGTTCGACCATCA GGATCGTGCG GCC CGC-CGATAC TTTTTTGATCAGCGC Bphy_3050 3428064 - 3426370 - | glucose-methanol-choline oxidoreductase Bphy_3052 3429851 - 3430750 + | LysR family transcriptional regulator Bphy_3053 3431030 - 3431560 + | adenylate cyclase Bphy_3054 3432070 - 3431579 - | AsnC family transcriptional regulator Bphy_3055 3432195 - 3432446 + | transcriptional coactivator/pterin dehydratase Bphy_3056 3432801 - 3432544 - | hypothetical protein Bphy_3057 3432892 - 3433578 + | two component transcriptional regulator TERM 3596 3433624 - 3433666 + F 100 -23.5 -2.90075 | gap 1, overlap 3433626 GTCCGGGTTGTCCGA CGGGCGGCCGCAAGCGCATC CGCG GATGCGCG-GCGGCCGCCTG TGTCATTCAACCCGG TERM 3597 3433626 - 3433664 + F 100 -22.5 -3.00298 | gap 1, overlap 3433624 CCGGGTTGTCCGACG GGCGGCCGCAAGCGCATC CGCG GATGCGCG-GCGGCCGCC TGTGTCATTCAACCC TERM 3598 3433801 - 3433775 - g 79 -15.1 -3.01791 | opp_overlap 3433764 ATCCCGCCGCGAATA GCCTGCGCCGC CAGCT GCTGCGCAGGC TCGCCGCTCCCCTTT TERM 3599 3434899 - 3434866 - g 77 -11.8 -3.56099 | gap 1, overlap 3434868 GATAACGCGCTGAAA TACGTGCCGCCGTCG CGTAT CAACGGCG-CACGCA TCACGATGACGGTCG TERM 3600 3434897 - 3434868 - g 73 -12.2 -3.35522 | gap 1, overlap 3434866 TAACGCGCTGAAATA CGTGCCGCCGTCG CGTAT CAACGGCG-CACG CATCACGATGACGGT TERM 3601 3435241 - 3435226 - g 100 -11.8 -6.02919 | opp_overlap 3435222 CGAGAAACAAAAAAA CCGGCG CATG CGCCGG TCGATCTCTGAACTT Bphy_3058 3433753 - 3435252 + | integral membrane sensor signal transduction histidine kinase Bphy_3059 3435788 - 3435306 - | nuclear protein SET TERM 3602 3435917 - 3435895 - R 100 -17.7 -3.83502 | GATGCGGATAGCAAA CGCGGCGCC GTGCT GGCGCCGCG TCGACACGTGACGCA Bphy_3060 3437182 - 3436052 - | NADH:flavin oxidoreductase/NADH oxidase Bphy_3061 3438006 - 3437275 - | MOSC domain-containing protein Bphy_3062 3438729 - 3438016 - | glutamine amidotransferase class-I TERM 3603 3438814 - 3438866 + r 83 -13.4 -3.54424 | gap 1, opp_overlap 3438808, overlap 3438815 TGCGCAAGACGGCGC AAGCTCA-CCTGCTGCCGTTCGCGA GTGT TCGCGAGCGGCAGCAGGCTCCGCAG TTTAGCCGACTCAGG TERM 3604 3438815 - 3438865 + r 87 -16.9 -2.72511 | gap 1, opp_overlap 3438808, overlap 3438814 GCGCAAGACGGCGCA AGCTCA-CCTGCTGCCGTTCGCGA GTGT TCGCGAGCGGCAGCAGGCTCCGCA GTTTAGCCGACTCAG TERM 3605 3438895 - 3438907 + r 78 -4.1 -4.87665 | GGCTTGCTGCGCGAA GATCT TCC AGGTC TTTTTCTGCGTGGCC Bphy_3063 3439521 - 3438877 - | MarR family transcriptional regulator TERM 3606 3439135 - 3439191 + g 71 -8 -4.08767 | overlap 3439136 GAAAATCGATTGCTC TTCGTCGCGCAGGGTGCC-GACTGCTTT CGC AAGGAAGTCCGGC-CATTGCGCGGCGCG TTTTGCAGCCGTGCG TERM 3607 3440117 - 3440103 - R 100 -8.5 -5.80003 | opp_overlap 3440103 CGAAGAAATAAAAAA CCCGC AAGAA GCGGG TTCAGTCGAGGTTTG Bphy_3064 3441306 - 3440191 - | glutamate--cysteine ligase GCS2 TERM 3608 3441421 - 3441444 + r 73 -11.7 -3.09452 | overlap 3441442 ACAACCTGAGCGCTG TCGGGCCGA AACGTG TCGGCCCGG TGTCTCTTCGCCGCT Bphy_3065 3442662 - 3441460 - | sodium/hydrogen exchanger TERM 3609 3443495 - 3443520 + r 72 -6.1 -4.37886 | CCCGCAATTTGCCCG GTTATCCCCAG CACG CCGTGGATAAC TTTTCTACAGGCTCG Bphy_3066 3445506 - 3443539 - | tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC TERM 3610 3443880 - 3443920 + g 88 -11.7 -4.2349 | opp_overlap 3443861 3443862 CATGCACGTTGAACG CGTCGCGCATGTCGGGCAG CAT CTGCGCGACCCGCTCGATG TTTTCGATGTGCGCG TERM 3611 3444174 - 3444184 + g 77 -8.2 -4.25104 | opp_overlap 3444156 CGGGTGCACTCACCA CGGC GGC GCCG TTTTCGTCGAACACA TERM 3612 3444572 - 3444550 - G 81 -5.4 -4.8543 | opp_overlap 3444565 CAACGCGTACAAAAA GCCTGCGCGT GTG ATGCGCGAGC CGACGCTGTCGTCGC TERM 3613 3445025 - 3445012 - G 71 -4.5 -4.55287 | opp_overlap 3445022, overlap 3445013 3445014 GCCATCCAGATAAAA CGCGT CGGC ACGCA GCCAGAGCGTGGGCA Bphy_3067 3445975 - 3446253 + | histone family protein DNA-binding protein TERM 3614 3446279 - 3446293 + T 100 -12.8 -5.90981 | CTTGAGTTGTTGACA CCCGCC GTT GGCGGG TTTTTTTTCGTCTGC Bphy_3068 3447607 - 3446348 - | cobalamin synthesis protein P47K Bphy_3069 3448188 - 3447745 - | lytic transglycosylase catalytic TERM 3615 3448292 - 3448280 - H 80 -10.5 -4.07568 | CTCCCCCCGGGAAAA CCCGC TAC GCGGG GGATATTCGAACTGT TERM 3616 3448920 - 3448949 + G 81 -9.3 -4.21194 | gap 1, opp_overlap 3448921, overlap 3448921 GATCAGGCGCTGAAG ACCTTGCAGTCCGC ACT GCGGA-TGCAGGGC TTTTCGCTCGTGCAG TERM 3617 3448921 - 3448948 + G 72 -12.8 -3.12395 | gap 1, opp_overlap 3448921, overlap 3448920 ATCAGGCGCTGAAGA CCTTGCAGTCCGC ACT GCGGA-TGCAGGG CTTTTCGCTCGTGCA Bphy_3070 3448683 - 3451046 + | general secretion pathway protein D TERM 3618 3451209 - 3451191 - g 79 -10.2 -4.09864 | ACGGATTCGCGAAAA GCGGCCAG ATC CTGGTCGC GCATCAGCACGCCGA TERM 3619 3451811 - 3451799 - g 86 -9.1 -4.56597 | CGTCTGCTGGAAAAA GACGC GCA GCGTC TGAATCTCGAAGCGC Bphy_3071 3451043 - 3452590 + | general secretory pathway protein E TERM 3620 3453557 - 3453515 - g 78 -12.7 -3.50393 | gap 1, overlap 3453518 3453550 CGCGATGCGAGACAA CATCGACGATGCCATCGTGC GCGT GCGCGAAGGCA-CGTCGCTG TCGCGTGCGCTCGGC Bphy_3072 3452595 - 3453812 + | general secretion pathway protein F Bphy_3073 3454329 - 3453907 - | putative general secretory pathway protein C Bphy_3074 3454490 - 3454966 + | general secretion pathway protein G TERM 3621 3455061 - 3455085 + G 72 -13.5 -3.05384 | opp_overlap 3455059 3455061 GTGCGTTTCACAAGA CCGTCAGCGTC GAT GACGCGGGCGG TTGCGTGAGCCGGCG TERM 3622 3455338 - 3455353 + G 72 -8.2 -4.09556 | CCCTATTTCATGGTT GCCGCT CGAC GGCGGC TTTCGTTTCGATATC Bphy_3075 3455021 - 3455596 + | general secretion pathway protein H Bphy_3076 3455596 - 3456027 + | general secretion pathway protein I TERM 3623 3456677 - 3456689 + G 86 -6.9 -4.91109 | overlap 3456672 AATTCGCTCGCGCGG CCCGT GAC GCGGG TTTTTCTCGTGGGAG Bphy_3077 3456005 - 3456709 + | putative general secretory pathway protein J TERM 3624 3457421 - 3457387 - g 72 -7.1 -4.26076 | opp_overlap 3457387 3457382 3457389, overlap 3457413 GGACGCCGACGAAAA CG-CGCCCGTCGCACCG CTC CAG-ATGACGGGCGTCG ATTCCTTGCTGGACG Bphy_3078 3456719 - 3457822 + | general secretion pathway protein K TERM 3625 3457909 - 3457927 + G 84 -8.9 -4.4891 | opp_overlap 3457908, overlap 3457885 TGCCGTCGCAGGAAT GGCAACT GCCGG AGTTGCC TTTTCTGCTGCTCGA TERM 3626 3458232 - 3458276 + G 70 -11.5 -3.34398 | overlap 3458231 3458231 GTCCTCGAGACGTTC GCG-GCGGCGGGCCATCGC AATGTGAAG GCGGTG-CCCGTCGCGCGC TGTTTGCCGCAGCCG TERM 3627 3458991 - 3459016 + G 71 -4.5 -4.55287 | overlap 3458992 CAACAGTTGCGCGTG GCGGCGGGCGA ACTG TCGCCGGACGA TTTTCTGTCGCTCGC Bphy_3079 3457851 - 3459230 + | general secretion pathway protein L Bphy_3080 3459227 - 3459730 + | general secretion pathway M protein TERM 3628 3460090 - 3460142 + G 100 -22.8 -3.14344 | gap 1 CTGTCTTTGTCGATG CGACGCTGCGCAGCGCGACGCTGTC GGGC GGCAGCATCGCGGTGC-CGGCGTCG TTGCTCGCGGGCCTC TERM 3629 3460450 - 3460407 - g 76 -13.8 -3.06183 | gap 1 GGCACGGTCAGCGAA GCGTC-GACGTCGTTCACGGG CAT CGCGAGCACGACGCCCGACGC CGTCGACAATCTCGC Bphy_3081 3459753 - 3460532 + | type II secretion system protein N TERM 3630 3460591 - 3460554 - T 100 -15.6 -4.07568 | opp_overlap 3460559, overlap 3460559 CGGGCCGCTCCAAAA CACGACGGCCGCCATG TTTGCG CATGGCGGCCGTTTTG CGTCGCGCGGATAAC TERM 3631 3460586 - 3460559 - T 100 -18.5 -2.93623 | opp_overlap 3460559, overlap 3460554 CGCTCCAAAACACGA CGGCCGCCATG TTTGCG CATGGCGGCCG TTTTGCGTCGCGCGG TERM 3632 3460559 - 3460586 + T 100 -19.2 -4.18018 | opp_overlap 3460559 3460554 CGCTCCAAAACACGA CGGCCGCCATGT TTGC GCATGGCGGCCG TTTTGCGTCGCGCGG Bphy_3082 3462225 - 3460615 - | RND efflux system outer membrane lipoprotein Bphy_3083 3462687 - 3462418 - | hypothetical protein TERM 3633 3462469 - 3462453 - G 100 -15.1 -4.56607 | opp_overlap 3462465 CGAGGAAGCACAAAA GCCGCCC GCT GGGCGGC TTGCGCGGCGACGCA TERM 3634 3462739 - 3462701 - R 100 -15.2 -5.05228 | overlap 3462703 ACGAAAGCACAAAAA GGCGCGGCGGCGTCAATG GGT CACCGACGCCGCCACTTC CGGTACTTCAACGAA TERM 3635 3462737 - 3462703 - R 86 -16.4 -2.75822 | overlap 3462701 GAAAGCACAAAAAGG CGCGGCGGCGTCAATG GGT CACCGACGCCGCCACT TCCGGTACTTCAACG Bphy_3084 3463487 - 3462759 - | OmpA/MotB domain-containing protein TERM 3636 3462802 - 3462814 + g 91 -10.5 -4.63218 | CGCCGGTTCTTCGCG CGGCC AAT GGCCG TTTTGTTCGGCGCAA Bphy_3085 3464069 - 3463593 - | hypothetical protein TERM 3637 3464260 - 3464241 - R 100 -10.7 -5.14563 | opp_overlap 3464241 CGCGCCACGAAAAAA GGGCAGC GTGAAA GCTGCCC TTTCGCCATTCGTCG TERM 3638 3464241 - 3464260 + r 71 -10.7 -3.61764 | opp_overlap 3464241 CGCGCCACGAAAAAA GGGCAGC GTGAAA GCTGCCC TTTCGCCATTCGTCG Bphy_3086 3465951 - 3464308 - | glutamate--cysteine ligase TERM 3639 3464866 - 3464849 - G 83 -9.1 -4.3739 | gap 1, opp_overlap 3464838 3464859, overlap 3464837 TATGCGTCGAGAAAA CGCGC-CG TTT CGAGCGCG ATGCCCGTCGGTTCG TERM 3640 3464989 - 3465001 + g 75 -7.7 -4.2349 | CTTCGGGCGGATCGT CGAGT AAA ACTCG TTTTCGATCTGCAGC TERM 3641 3465368 - 3465387 + g 70 -7.8 -3.96624 | opp_overlap 3465352 3465368 CGATCGGACTGGAAA TCGACCGC ATTG GCCGTCGA TTTCTGGTCGGCGTG TERM 3642 3465857 - 3465827 - G 75 -12.4 -3.53811 | TCGATGCCGCGCAAA CCGGCTGCCAGCGC GTC GCGCTGCGGGCCGG ATGTCAGCACGGACA Bphy_3087 3467094 - 3466171 - | alcohol dehydrogenase Bphy_3088 3468221 - 3467091 - | AraC family transcriptional regulator TERM 3643 3468377 - 3468394 + H 74 -7 -4.27316 | opp_overlap 3468377 TAGCGGGAGAATTGA CCCCAA AAAAAG TTGGGG TTTTCCCTTAAAAAA TERM 3644 3468482 - 3468503 + H 100 -13 -5.91981 | CCTGATATGGATTCA GCCCGCTC CACGTC GAGCGGGC TTTTTTTTGCCTTTT TERM 3645 3468913 - 3468874 - g 78 -12.8 -3.53811 | gap 1, opp_overlap 3468898 3468899 3468901, overlap 3468911 CTGATGCGCTCGAAA GCTGGCTCGCCG-CGCGCA ATG TGCGCATCGGCGAACAGGC GACACGCTATGGTGC Bphy_3089 3468600 - 3469013 + | glyoxalase/bleomycin resistance protein/dioxygenase Bphy_3090 3469703 - 3469062 - | YaeQ family protein TERM 3646 3470064 - 3470032 - R 74 -8.3 -4.15632 | overlap 3470036 3470037 ATGATCAGACAGAAA TGAAGTGGCCGGACT AAG AGTCCGGCCAGCGCG AACCGATAAAGCGCA TERM 3647 3470060 - 3470036 - R 95 -14.3 -3.67481 | overlap 3470032 3470037 TCAGACAGAAATGAA GTGGCCGGACT AAG AGTCCGGCCAG CGCGAACCGATAAAG TERM 3648 3470059 - 3470037 - R 89 -17.8 -2.79766 | overlap 3470036 3470032 CAGACAGAAATGAAG TGGCCGGACT AAG AGTCCGGCCA GCGCGAACCGATAAA Bphy_3091 3470497 - 3470156 - | hypothetical protein TERM 3649 3470509 - 3470523 + H 80 -9.2 -4.15664 | TCATGGTATCTCCGT GCGGGC ATT GCTCGC TTTATCTATGCGTTT Bphy_3092 3471041 - 3471667 + | lysine exporter protein LysE/YggA Bphy_3093 3471812 - 3471979 + | hypothetical protein Bphy_3094 3472422 - 3472718 + | hypothetical protein Bphy_3095 3474125 - 3472947 - | integrase family protein Bphy_3096 3475637 - 3474237 - | tRNA modification GTPase TrmE TERM 3650 3476021 - 3476008 - g 82 -3.7 -5.06816 | overlap 3476009 ACCGTCGAAGAAAAA GCGGC CTTT GCCGA GCGACTCAAGTTCGC TERM 3651 3476070 - 3476044 - g 73 -13.6 -2.78715 | opp_overlap 3476032, overlap 3476031 AAGTTCGCGATGAGA CGCGCCCCGGAG AAA CTCAGGGGCGGG ACCGACCTCGCATTG Bphy_3097 3475987 - 3476409 + | hypothetical protein TERM 3652 3476428 - 3476459 + T 90 -10.1 -4.59773 | opp_overlap 3476433, overlap 3476433 AATCGCAAGACGTAA AAAAACCGCCCGG CTGAAA CCGGGCGGTTTGC TTTTTCGGCATCGGC TERM 3653 3476454 - 3476433 - T 100 -15.1 -5.52909 | opp_overlap 3476428 3476433 CAAGACGTAAAAAAA CCGCCCGGC TGAA ACCGGGCGG TTTGCTTTTTCGGCA TERM 3654 3476433 - 3476454 + T 100 -14.4 -4.32046 | opp_overlap 3476433, overlap 3476428 CAAGACGTAAAAAAA CCGCCCGG CTGAAA CCGGGCGG TTTGCTTTTTCGGCA Bphy_3098 3478160 - 3476508 - | 60 kDa inner membrane insertion protein TERM 3655 3476950 - 3476977 + g 78 -10.5 -3.95584 | TCGCTCTTGAAGCGT TCGCGCAGCGC CTGCAT GCGCGGCGTGA TTTCCTTCATGCGGG TERM 3656 3478022 - 3478036 + g 74 -12.8 -3.20573 | overlap 3478021 TCGACGAGCCGGGCG CGGCGG GAG CCGCCG TCTTGGTCTGCGTCG Bphy_3099 3478421 - 3478191 - | hypothetical protein TERM 3657 3478362 - 3478348 - G 86 -7.1 -4.88736 | opp_overlap 3478355 CAGGAGGGATAAAAA CGGCA CCGAT TGCCG AGCATGGGACTCACG Bphy_3100 3479004 - 3478495 - | ribonuclease P protein component TERM 3658 3478896 - 3478865 - G 78 -13.2 -3.54424 | opp_overlap 3478872, overlap 3478872 CGCCACGGGCGCAAA CGAAAAACGGATGA AAAT TCATCCGTTTTTAG CAGCCTTGCGGCTTT TERM 3659 3478889 - 3478872 - G 100 -9.9 -4.98531 | opp_overlap 3478872, overlap 3478865 GGCGCAAACGAAAAA CGGATGA AAAT TCATCCG TTTTTAGCAGCCTTG TERM 3660 3478872 - 3478889 + g 86 -9.9 -4.58283 | opp_overlap 3478872 3478865 GGCGCAAACGAAAAA CGGATGA AAAT TCATCCG TTTTTAGCAGCCTTG Bphy_3101 3479164 - 3479030 - | ribosomal protein L34 SEQUENCE gi|186471973|ref|NC_010623.1| Burkholderia phymatum STM815 chromosome 2, complete sequence (length 2697374) Bphy_3102 624 - 28 - | putative lipoprotein Bphy_3103 1435 - 737 - | hypothetical protein Bphy_3104 1620 - 2570 + | putative PTS IIA-like nitrogen-regulatory protein PtsN Bphy_3105 3207 - 2614 - | hypothetical protein Bphy_3106 3387 - 3707 + | hypothetical protein Bphy_3107 3747 - 3965 + | FmdB family regulatory protein TERM 1 4959 - 5011 + G 75 -4.2 -4.63932 | gap 3, overlap 4960 CTGTCCACGCATGAC GTCAC-CGCG-TGCGCTGCGGCC ATGCGCTAGC GGCAGC-GCGCATCGCGAGTGAA TTTTCTTCACCCGTC Bphy_3108 4050 - 4988 + | LysR family transcriptional regulator TERM 2 5206 - 5224 + G 83 -9.5 -4.34402 | overlap 5196 5198 CATCCGGCAGACCTT CGGCCTG TTCAT CGGGCCG TTTTCGTATGACCGC TERM 3 5305 - 5356 + G 93 -17.2 -3.53012 | gap 1 GTGGGGTTTCGCGCA GCCGTTCGCGGGCGCCGCTGCCG ACCGCTA CGGC-GCGGCGCCTGTGGTCGCC TTTGGCGCGACCACG Bphy_3109 5093 - 6337 + | major facilitator transporter TERM 4 6377 - 6398 + T 100 -17.3 -4.12857 | TTGGTAGCGGCATTT GCGGACGGC TCGC GCCGTCCGC TTCTTTCTCGTGCTT Bphy_3110 7117 - 6443 - | two component transcriptional regulator Bphy_3111 8647 - 7319 - | integral membrane sensor signal transduction histidine kinase TERM 5 8811 - 8845 + r 75 -10.7 -3.70149 | gap 1, opp_overlap 8809 8806, overlap 8813 8814 GGTTGCAAAAGCATG GATCGGCACGCGCAGA TTTC TCTGCGCGT-CCGCGC TTTCCATCGTGTGCA TERM 6 8814 - 8844 + r 70 -11.9 -2.81768 | gap 1, opp_overlap 8809 8806, overlap 8813 8811 TGCAAAAGCATGGAT CG-GCACGCGCAGA TTTC TCTGCGCGTCCGCG CTTTCCATCGTGTGC Bphy_3112 9189 - 8881 - | hypothetical protein TERM 7 8958 - 8933 - G 77 -8.9 -4.2558 | gap 1, opp_overlap 8944 TATTGGGGATGAAAA GGCGCGCCCGCC TGC GACGTGC-CGCC TGTCACGCCGCCGTA Bphy_3113 9287 - 9535 + | hypothetical protein Bphy_3114 9590 - 9775 + | hypothetical protein Bphy_3115 9835 - 10290 + | hypothetical protein TERM 8 11378 - 11344 - g 72 -12.9 -3.17212 | overlap 11347 GCACTACGCGATCAA CGACTACGG-CGACGCG CAC CGCGTCGTCCGTCG-CG CGACGGTGCACGGCG TERM 9 11376 - 11347 - g 71 -14.3 -2.78547 | gap 1, overlap 11344 CTACGCGATCAACGA CTACGG-CGACGCG CAC CGCGTCGTCCGTCG CGCGACGGTGCACGG Bphy_3116 10511 - 11461 + | taurine dioxygenase Bphy_3117 12611 - 11487 - | heat shock protein DnaJ domain-containing protein TERM 10 12226 - 12198 - G 93 -13.7 -4.18018 | CTTGCGCAGTGAAAA CCCCGCCGCCGCG GGC CTCGACGGCGCGG CACGCGGATCGACGC TERM 11 12688 - 12700 + r 72 -4.7 -4.57341 | opp_overlap 12688 CCGGTCGTGAACCCA GCCGG ATA CCGCC TTTTTGAGCGCCGTT Bphy_3118 13785 - 12787 - | hypothetical protein TERM 12 13550 - 13582 + g 81 -9.7 -4.26076 | opp_overlap 13549 13548, overlap 13551 GGATCGCCATAAATG CCGCCGCGCGCCG AAATGAG CGGCGTGAGGCGC TTTTCATCGCAATAC TERM 13 13551 - 13581 + g 72 -13.2 -3.15324 | opp_overlap 13549 13548, overlap 13550 GATCGCCATAAATGC CGCCGCGCGCCG AAATGAG CGGCGTGAGGCG CTTTTCATCGCAATA Bphy_3119 14484 - 14272 - | hypothetical protein TERM 14 14636 - 14611 - R 70 -11.8 -2.71731 | opp_overlap 14602 14611 14611 GTTACTGTTCAATGA CGGCCGGCGT TGCCGT ACGCCGGCCC GTTGTGTGCGACTTT TERM 15 14611 - 14637 + r 74 -11.6 -3.51161 | gap 1, opp_overlap 14611, overlap 14611 14602 GTTACTGTTCAATGA C-GGCCGGCGT TGCCGT ACGCCGGCCCG TTGTGTGCGACTTTG Bphy_3120 15689 - 14658 - | phosphate ABC transporter, periplasmic phosphate-binding protein TERM 16 15466 - 15481 + g 76 -6 -4.56775 | AGCGGCGCATCGGAA CCGGCG AAAT CGACGG TTTTTGCGAGCACCT Bphy_3121 17373 - 15886 - | transcriptional regulator TERM 17 16110 - 16100 - G 72 -8.2 -3.9749 | overlap 16101 ACCCATAACAGCAAA CCGC CCG GCGG CAGGTTCAGCCGCGT TERM 18 16714 - 16696 - G 85 -8 -4.62302 | opp_overlap 16695, overlap 16697 CAACAGCCCGAAAAA CGCCGGCG ATT CGACGGCA ATCGTGTCGCCCGGC TERM 19 16733 - 16775 + g 73 -11.9 -3.40522 | GTGTCGCCCGGCTGC GCGACGGCG-CGCAGCGCGAG GTT CAC-CGCTTCGACGCCGCCGC TTGTGATGAGGACGT TERM 20 17001 - 16947 - G 77 -14.9 -2.87132 | gap 1, overlap 16994 GCTCCGTCGGATACA GCGC-GGCGCCCGCCGTCGCGCCG CCCAGGTT CAGCGCGTCGGGAAACGCCTGCGC GCGCTCGATCACCCG TERM 21 17163 - 17122 - G 75 -10.8 -3.86897 | opp_overlap 17127, overlap 17125 CGGACGCCGGACAAA GTAGCCGGCGCGC-GGCCGC GCCT GCAGCCAGC-CGCCGTCTTC GAGACGCCGGAACAC TERM 22 17146 - 17125 - G 71 -12.9 -3.01125 | opp_overlap 17127, overlap 17122 ACGCCGGACAAAGTA GCCGGCGCG CGGC CGCGCCTGC AGCCAGCCGCCGTCT TERM 23 17686 - 17635 - g 81 -13.6 -3.55622 | GCGAACTGGTTCAAA CGCGGCAGCGCCATCACCGCGC TGAACGGC GCGCTGCGACTGAGCTACCGCG ACGGCTCCCTCGACT Bphy_3122 17578 - 17919 + | hypothetical protein Bphy_3123 19107 - 17953 - | DNA-directed DNA polymerase TERM 24 18063 - 18020 - G 91 -15.2 -3.91897 | overlap 18021 CTTGCCAGCGACAAA CCGCTGACGCGCACGCCAAG CAGC CGCAGCTTGCGCGTCAGCGC GACGCGCTTCAGACA TERM 25 18062 - 18021 - G 89 -18.7 -2.94924 | overlap 18020 TTGCCAGCGACAAAC CGCTGACGCGCACGCCAAG CAGC CGCAGCTTGCGCGTCAGCG CGACGCGCTTCAGAC Bphy_3124 19576 - 19271 - | hypothetical protein Bphy_3125 19791 - 19573 - | hypothetical protein TERM 26 19823 - 19840 + r 74 -2.7 -4.87786 | overlap 19824 CAATCGCACGCCGAT ACTGTAT ATCC ATACAGG TTTTTGTGCAATTGC TERM 27 19976 - 19944 - R 100 -15.6 -4.25056 | gap 1, opp_overlap 19944 CAGCGGACGAAGAAA CGCCAGGCCGTCGCA ATCT CGCGACG-CCCGGCG TTCAATCGTTGACGG TERM 28 19944 - 19976 + r 76 -12.7 -3.13164 | gap 1, opp_overlap 19944 CAGCGGACGAAGAAA CGCCAGGCCGTCGC AATCTC GCGACGCCC-GGCG TTCAATCGTTGACGG Bphy_3126 21191 - 20007 - | porin Bphy_3127 23700 - 21259 - | glycoside hydrolase family protein Bphy_3128 25031 - 23724 - | major facilitator transporter TERM 29 24345 - 24315 - G 76 -6.1 -4.56597 | gap 1, opp_overlap 24306 24339, overlap 24339 CGGCTCCGCGAAAAA GCG-CGCTTGTGCG ATCG CCCAGAAGCGGCGC GTGCCGAGCACTTCA TERM 30 24339 - 24372 + g 73 -12.4 -3.41051 | gap 1, opp_overlap 24315 24339 TGCGATCGCCCAGAA GCGGCGCGTGCCGAG CACTT CACGG-ATGCGCCGC TTGTCCTGCGCATAA TERM 31 25256 - 25238 - g 71 -4.5 -4.58685 | opp_overlap 25228 25250 AAATCTGCCGAAAAA CGACATG GCTTG CGTGTCG TTCGCGGCATGTTCA Bphy_3129 25068 - 25403 + | hypothetical protein TERM 32 25838 - 25862 + T 100 -11.4 -4.89966 | opp_overlap 25839 25841, overlap 25839 ACCACGTAGCACCGA AGAGCCGTCG CGGAT CGACGGCTCG TTTCTTTTTCACTGT TERM 33 25839 - 25861 + T 88 -14.9 -3.52353 | opp_overlap 25839 25841, overlap 25838 CCACGTAGCACCGAA GAGCCGTCG CGGAT CGACGGCTC GTTTCTTTTTCACTG TERM 34 25861 - 25839 - T 85 -14.9 -3.10164 | opp_overlap 25839 25838, overlap 25841 CCACGTAGCACCGAA GAGCCGTCG CGGAT CGACGGCTC GTTTCTTTTTCACTG TERM 35 25859 - 25841 - T 73 -11.7 -3.10975 | opp_overlap 25839 25838, overlap 25839 ACGTAGCACCGAAGA GCCGTCG CGGAT CGACGGC TCGTTTCTTTTTCAC Bphy_3130 26041 - 25871 - | hypothetical protein TERM 36 26526 - 26508 - g 91 -6.6 -5.07486 | overlap 26510 GATGCCGAAGAAAAA GCTGCCCG TGG CGGACATC GACGGCGTGACGGTG Bphy_3131 26362 - 27120 + | putative glutathione S-transferase Bphy_3132 27262 - 27900 + | lysine exporter protein LysE/YggA Bphy_3133 28852 - 27908 - | hypothetical protein Bphy_3134 31275 - 28957 - | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) TERM 37 30972 - 30933 - G 77 -12.1 -3.56325 | gap 1, overlap 30934 CCTCGACAATCACAA GGCGCCGG-TCGTGCATC GCCGT GCCGCACGAGCCGGCGCA TGGACCCAAGCGCAT TERM 38 30971 - 30934 - G 78 -15.6 -2.73474 | gap 1, overlap 30933 CTCGACAATCACAAG GCGCCGG-TCGTGCATC GCCGT GCCGCACGAGCCGGCGC ATGGACCCAAGCGCA Bphy_3135 32200 - 31367 - | hypothetical protein TERM 39 31521 - 31493 - G 85 -12.4 -4.08571 | gap 1, opp_overlap 31486 CGACAACACGAGAAA CGCGTCTTCGCCG ACCG CGGCG-AGGCGCG GATCGTCGGGGTACA TERM 40 32267 - 32223 - R 73 -2.8 -4.72272 | gap 2, opp_overlap 32229 32234 32248, overlap 32250 32253 CTCCTCGATGAAAAA CATCTATGCACGCGCCGCTTTG AAA CACAGCG-CG-GCGCTCAGTTG TTTAGGCGCCCGGCC Bphy_3136 32932 - 32261 - | multiple antibiotic resistance (MarC)-related protein Bphy_3137 33246 - 33458 + | hypothetical protein Bphy_3138 33455 - 34933 + | Na+/solute symporter TERM 41 34944 - 34964 + T 91 -8.1 -5.04325 | overlap 34949 ATTAGCGTTTTTGTT CGTCTGCGC GAC GCGCTGTCG TTTTTGTGATTTGCC TERM 42 34991 - 35004 + T 93 -9.5 -4.81212 | TGCCTCGTGGCGCGT CGCGG GCAT CCGCG TTTTGTTGTCCTGCC Bphy_3139 35787 - 35056 - | precorrin-4 C11-methyltransferase Bphy_3140 36521 - 35784 - | precorrin-6x reductase Bphy_3141 37618 - 36518 - | cobalamin biosynthesis protein CbiD TERM 43 37076 - 37052 - G 70 -5 -4.4261 | overlap 37054 TGCTGAACACGAAAA CGGC-CGCACGA TGC CCGT-CGTGCCG AGTATCGACAATCCG TERM 44 37349 - 37314 - G 76 -9.6 -4.07568 | gap 1 GGGCCCGCGTGAAAA CGCACGCCGGGCGCGTC GGC AAGGCGCAC-GCGCGCG AACACGATCGCGCCA Bphy_3142 38823 - 37618 - | precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit TERM 45 38722 - 38690 - G 75 -12 -3.53811 | gap 1, overlap 38692 CGCACGGCGTTCAAA CAGGCGGGCAGCATC GACA GATGCCGCTCGCC-G CCATAGATCACCGAT TERM 46 38721 - 38692 - G 88 -15.7 -3.34715 | overlap 38690 CACGGCGTTCAAACA GGCGGGCAGCATC GACA GATGCCGCTCGCC GCCATAGATCACCGA TERM 47 38891 - 38857 - H 87 -7.7 -4.7497 | opp_overlap 38857 38886 TTGATGTACTAAAAA CGCTGCGGCAGCCGT GTTCA AAGGCCGCGGCATCG TTGTGCTGTTCGAAA TERM 48 38920 - 38910 - H 76 -3.2 -5.00616 | TGCTGTTCGAAAAAA GGCA TAA TACC CGTTCGCCGGTGCCT Bphy_3143 39178 - 40575 + | precorrin-3B synthase Bphy_3144 40556 - 41194 + | precorrin-8X methylmutase TERM 49 41742 - 41728 - g 74 -12.8 -3.23979 | overlap 41723 CGAAGACGAACTCAA GCGGCG TCT CGCCGC TGCCGACGCCGCCGT Bphy_3145 41195 - 41950 + | precorrin-2 C20-methyltransferase TERM 50 43220 - 43189 - g 85 -16.6 -3.14881 | gap 1 GAAGCGCTCGACGAA GCCCATGCCGACGCG CAC CGCG-CGGCATGGTC CGCCGTCGAACTCGA Bphy_3146 41947 - 43665 + | precorrin-3B C17-methyltransferase TERM 51 43851 - 43874 + G 73 -13.8 -2.87564 | opp_overlap 43845 43843 43841, overlap 43854 GTGAAGACACCGTCC AGACGGGCGC AAGC GCGCCCGTCC TGTCTCGGCAGCTCG TERM 52 43854 - 43871 + G 71 -14.1 -2.69151 | opp_overlap 43845 43843 43841, overlap 43851 AAGACACCGTCCAGA CGGGCGC AAGC GCGCCCG TCCTGTCTCGGCAGC Bphy_3147 43826 - 44779 + | type IV pilus assembly PilZ TERM 53 44819 - 44847 + T 100 -21.1 -3.80625 | opp_overlap 44819 CCGTCAATGGAAAAA CGGCCTGGTCATC CAC GATGACCGGGCCG TTTGCGTTGTGGGCC TERM 54 44847 - 44819 - T 100 -18.9 -4.74103 | opp_overlap 44819 CCGTCAATGGAAAAA CGGCCTGGTCATC CAC GATGACCGGGCCG TTTGCGTTGTGGGCC Bphy_3148 46019 - 44904 - | OmpA/MotB domain-containing protein TERM 55 45779 - 45762 - G 72 -8.3 -3.96148 | overlap 45730 GTTGTCGATCAGAAA GCGCGCG TTGC CGAGCGC ACGGTTCGCCGCATC Bphy_3149 54677 - 46071 - | hemagluttinin domain-containing protein TERM 56 47453 - 47430 - G 72 -11 -3.53091 | gap 1, opp_overlap 47443 47445 47446, overlap 47431 47443 AGCCGTGCCCGTAAA GTCGACGAGCG AAC CGCCCGTCG-C GGACGCGACGAGGAT TERM 57 47443 - 47469 + g 78 -4.3 -4.77036 | gap 1, opp_overlap 47430 47431 47443, overlap 47445 47446 AAGTCGACGAGCGAA CCGCC-CGTCGC GGAC GCGACGAGGATG TTTTTGCTCGTCGCA TERM 58 50736 - 50760 + g 86 -15.7 -3.21099 | GACGTTCACGGCATC CGTCGCAGCCG AAC CTGCTGCGACG TTGGTGATGCGGCGA TERM 59 51279 - 51255 - G 71 -10.6 -3.64198 | opp_overlap 51273 GGCCGAGATAGAGAA GCCGCCCGGC GCGAA GCCGGCCGAC GACAGCGTAGCCGCG Bphy_3150 55777 - 55130 - | magnesium chelatase subunit ChlD TERM 60 55788 - 55767 - G 77 -12.3 -3.59979 | gap 1, opp_overlap 55756 55768, overlap 55729 TGCCGCCATCGGAAA CCGCTGCGCA TTG TGCGC-GCGG TCGCGCCCTTCCGAT TERM 61 55768 - 55812 + g 100 -3.4 -5.67063 | gap 1, opp_overlap 55729 55767, overlap 55756 GCCGCCATCGGAAAC CGCTGCGC-ATTGTGCGCGCG GTCG CGCCCTTCCGATGGCTCAGCG TTTTTTTGTGCTGAG Bphy_3151 56835 - 55807 - | magnesium chelatase TERM 62 56077 - 56063 - G 71 -9.2 -3.70076 | TCAAATGCAGCCAAA GCGCGC GCC GCACGC AGCATCATGAGGTCG Bphy_3152 60635 - 56832 - | cobaltochelatase, CobN subunit TERM 63 60056 - 60029 - G 70 -11.2 -3.3197 | gap 1, opp_overlap 60024, overlap 60015 ACAGGATCGCGACAA CGGGCGCGCCCGG TGT CCAG-CGCGCCTG CCAGTCTTCGATGGT Bphy_3153 61755 - 60646 - | cobalamin biosynthesis protein CobW TERM 64 61905 - 61848 - H 90 -12 -4.18494 | gap 3, opp_overlap 61886, overlap 61849 61891 TACGGGGACGGAAAA CGGCGCCGCAAGCGC--TTCGCGGCCGCC AGA GGCAAGTGCGAAACGCGCATGCGGCGC-G TGCGGAATCATGAAC TERM 65 61905 - 61849 - H 73 -12.2 -3.10775 | gap 2, opp_overlap 61886, overlap 61848 61891 ACGGGGACGGAAAAC GGCGCCGCAAGCGC--TTCGCGGCCGCC AGA GGCAAGTGCGAAACGCGCATGCGGCGCG TGCGGAATCATGAAC TERM 66 61937 - 61891 - H 74 -11.6 -3.61268 | gap 1, opp_overlap 61886 61916 61918 61920, overlap 61848 61849 61920 GAGGCAAGTGCGAAA CGCGCATGCGGCGCGTGCG GAATCATGAA CGCA-GCGCCGCATCCCCG CAGCGTTGCGTCGTT TERM 67 61916 - 61950 + H 72 -6.4 -4.37092 | gap 1, opp_overlap 61891 61920, overlap 61886 61918 61920 61944 GCGCGTGCGGAATCA TGAACGCAGCGCCGC ATCCCC GCAGCGTTGCG-TCG TTTTCTCGGGCCGGT TERM 68 61947 - 61920 - H 71 -11.2 -3.27298 | opp_overlap 61886 61918 61916 61920 61944, overlap 61891 GTGCGGAATCATGAA CGCAGCGCCGCA TCCC CGCAGCGTTGCG TCGTTTTCTCGGGCC TERM 69 62445 - 62388 - H 75 -10 -3.71649 | gap 3, opp_overlap 62388 62424, overlap 62395 CGGTTAAACGGGAAA CAGG-GAAGCGCCTCATTTGCACGGCACG CGT CGTGC-G-GCGAACGAAGCGCTCAGCCTG TGCTGTCCCCGCAAC TERM 70 62437 - 62395 - H 75 -12.1 -3.24289 | gap 2, opp_overlap 62388 62424, overlap 62388 ACGGGAAACAGGGAA GCGCCTCATTTGCACGGCACG CGT CGTGC-G-GCGAACGAAGCGC TCAGCCTGTGCTGTC Bphy_3154 62775 - 63518 + | uroporphyrin-III C-methyltransferase TERM 71 63883 - 63845 - g 75 -10.8 -3.85698 | overlap 63846 CTGCTCGTGCACAAA CGCGCGCGCGATGGCGTC ACG GTTGCCATCGCATGCGCT GCCGATGCCGGCCGC TERM 72 63882 - 63846 - g 73 -14.3 -2.91276 | overlap 63845 TGCTCGTGCACAAAC GCGCGCGCGATGGCGTC ACG GTTGCCATCGCATGCGC TGCCGATGCCGGCCG Bphy_3155 63515 - 63949 + | cobalamin (vitamin B12) biosynthesis CbiG protein Bphy_3156 63946 - 64548 + | cob(I)alamin adenosyltransferase TERM 73 64909 - 64937 + G 74 -10.9 -3.57144 | opp_overlap 64909, overlap 64925 64926 GTGATCTCGGCGAAA GCGATGGCGCAGA CCT TCGGCGCGGTCGC TTTCGGCCTCGCGCG Bphy_3157 64552 - 65856 + | glutamine amidotransferase TERM 74 66331 - 66389 + G 71 -13.1 -3.01726 | CGAAGTGCGCGCAAT GCTCGGCATGCCGGCAGGCGC-GCGGCCC GTC GCGCTGCTGTGTCT-CGGGCACGTCGAGC ATTTCTATCGCGAAC TERM 75 66517 - 66505 - g 79 -2.6 -5.08824 | CTGCCACGCAAAAAA GCCG GAAGA CGAC GCGAGCGAAACAGTC Bphy_3158 65840 - 66535 + | cob(II)yrinic acid a,c-diamide reductase Bphy_3159 67251 - 66565 - | two component transcriptional regulator Bphy_3160 69004 - 68114 - | DeoR family transcriptional regulator TERM 76 71379 - 71400 + G 71 -12.3 -3.29471 | gap 1, opp_overlap 71375 CGGCGAAGCGATCGT GCGCGACGGC GTG GCCGTCG-GC TTCGTGTCGTCGGCG Bphy_3161 69118 - 71601 + | FAD dependent oxidoreductase Bphy_3162 72482 - 71625 - | AraC family transcriptional regulator Bphy_3163 72675 - 73556 + | NmrA family protein TERM 77 73833 - 73856 + T 78 -9.6 -4.03234 | AGCGTCCTTCACGAC CACGAGAAAC GCCA GCTTCTCGTG TTTCTCTAACGCCGC Bphy_3165 75017 - 74700 - | transposase IS3/IS911 family protein Bphy_3167 76021 - 75755 - | hypothetical protein Bphy_3168 77254 - 76349 - | LysR family transcriptional regulator TERM 78 77393 - 77406 + r 78 -3.8 -4.88407 | TTTGCGGTCCATCTG CCTG GCGATA CAGG TTTTTCGTTAGCTGC TERM 79 79353 - 79363 + r 70 -2.4 -4.79752 | overlap 79347 CCGCATTCGTCGTCG GCCC AAC GAGC TTTTATGTTCTTCGG Bphy_3172 80556 - 79549 - | quinone oxidoreductase Bphy_3173 80895 - 81908 + | adenosine deaminase TERM 80 81978 - 81964 - g 75 -7 -4.4009 | opp_overlap 81974, overlap 81965 81966 GGTGATCTGAGAAAA CTCGCG CAG CGCGCG CTACCCAGGGTGCTT TERM 81 81974 - 81991 + G 78 -3.3 -4.96646 | opp_overlap 81964 81966 81965 GAAAACTCGCGCAGC GCGCGCT ACCC AGGGTGC TTTTTGATTATGTAG Bphy_3174 81901 - 83100 + | L-lactate dehydrogenase (cytochrome) Bphy_3175 83465 - 84568 + | NMT1/THI5-like domain-containing protein Bphy_3176 84670 - 85584 + | LysR family transcriptional regulator Bphy_3178 87447 - 89603 + | CoA-binding domain-containing protein Bphy_3179 89600 - 90427 + | enoyl-CoA hydratase/isomerase Bphy_3180 90473 - 91237 + | ABC transporter related TERM 82 91482 - 91519 + G 70 -4.7 -4.45544 | overlap 91489 TGTCACCTTTTACGA GACCATGGTCGGCTTCT TCGC AGGAGCGGGCTTAGGTC TTTTGCTTGGTGGCA Bphy_3181 91237 - 92070 + | binding-protein-dependent transport systems inner membrane component Bphy_3182 92112 - 92525 + | hypothetical protein TERM 83 92586 - 92574 - g 71 -10.5 -3.61715 | opp_overlap 92573 CAGGTCGGCGAAGAA CGCGC AAC GCGCG ATGATCTCGCCGCCG Bphy_3183 92538 - 93308 + | class II aldolase/adducin family protein Bphy_3184 93305 - 94315 + | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding TERM 84 94604 - 94624 + G 71 -3.9 -4.50976 | TTCGAAGGATGCCAC GTCCTCGTC GAG GAACAGGAC TTTTATGATGTGACA Bphy_3185 94397 - 95422 + | adenosine deaminase Bphy_3186 96628 - 95489 - | porin Bphy_3187 97815 - 96892 - | LysR family transcriptional regulator TERM 85 98205 - 98194 - g 82 -7.2 -4.64657 | overlap 98196 TGAAACTGGCAAAAA CGGC TGAG GCCG CGCGGTTTGACCTGC Bphy_3188 98076 - 99416 + | xenobiotic compound monooxygenase A subunit TERM 86 99604 - 99592 - g 71 -9.1 -3.73647 | CGTATGTATCAACAA GGACG CAT CGTCC CATCCGGTGATCGAG Bphy_3189 99416 - 99934 + | flavin reductase domain-containing protein TERM 87 100062 - 100072 + G 80 -4.6 -4.77173 | CTCCTCGCCGTACTA CCGG TTC TCGG TTTCTTTTCTGGCAC Bphy_3190 100032 - 100238 + | hypothetical protein TERM 88 100779 - 100817 + G 70 -6.1 -4.24075 | gap 1, overlap 100780 GCGGCGCGGCGACCG TTGCAGTGGTCAAGGATG TTCT CATCCT-GATCGTTGCAC TTTCTCTTGCTGCGT Bphy_3191 100235 - 101707 + | Na+/solute symporter Bphy_3194 103536 - 104627 + | ISRSO5-transposase protein Bphy_3195 105730 - 104657 - | methyl-accepting chemotaxis sensory transducer Bphy_3196 107077 - 105992 - | outer membrane protein (porin) Bphy_3197 108864 - 107221 - | glucose-methanol-choline oxidoreductase TERM 89 107305 - 107326 + g 70 -11.6 -3.36749 | ATCGACCGCCCTATC CGCGACTG CCATCA CAGTCGCG TTGGTGTTCGAACTG TERM 90 108217 - 108201 - G 70 -2.1 -4.63218 | opp_overlap 108203, overlap 108203 CTCCTTCGAACAAAA CGCGCTC GAC GACGGCG TCTGTAACCAGAGTC Bphy_3198 110365 - 108869 - | aldehyde dehydrogenase Bphy_3199 111595 - 110411 - | membrane protein involved in aromatic hydrocarbon degradation TERM 91 111203 - 111171 - G 71 -13.3 -3.03124 | CTGGATTTCGCAACA CCGGCTCCCGGCACT GTG AGCGCCGGACGCCCG TAGCTAGTGCCGACA Bphy_3200 112618 - 111656 - | ferredoxin Bphy_3201 114113 - 112803 - | phthalate 4,5-dioxygenase Bphy_3202 114317 - 115318 + | LysR family transcriptional regulator Bphy_3203 116342 - 115395 - | oxidoreductase domain-containing protein Bphy_3204 117181 - 116339 - | protocatechuate 4,5-dioxygenase Bphy_3205 117581 - 117174 - | protocatechuate 4,5-dioxygenase, alpha subunit Bphy_3206 118489 - 117581 - | amidohydrolase 2 Bphy_3207 119268 - 118564 - | 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase Bphy_3208 120301 - 119273 - | amidohydrolase 2 Bphy_3209 121407 - 120298 - | hypothetical protein Bphy_3210 121524 - 122444 + | LysR family transcriptional regulator TERM 92 122629 - 122659 + T 77 -11.9 -3.5394 | opp_overlap 122615, overlap 122623 122630 122656 122658 AGTCCACTGGCGATT TGCCAGAAAACGC TTATC GCGTCTTCTGGCG TTTAGAAACGGCTTT TERM 93 122630 - 122658 + T 73 -13.2 -2.72043 | opp_overlap 122615, overlap 122623 122629 122656 GTCCACTGGCGATTT GCCAGAAAACGC TTATC GCGTCTTCTGGC GTTTAGAAACGGCTT TERM 94 122912 - 122942 + T 77 -11.9 -3.5394 | opp_overlap 122898, overlap 122906 122913 122939 122941 AGTCCACTGGCGATT TGCCAGAAAACGC TTATC GCGTCTTCTGGCG TTTAGAAACGGCTTT TERM 95 122913 - 122941 + T 73 -13.2 -2.72043 | opp_overlap 122898, overlap 122906 122912 122939 GTCCACTGGCGATTT GCCAGAAAACGC TTATC GCGTCTTCTGGC GTTTAGAAACGGCTT Bphy_3211 124141 - 122966 - | porin Bphy_3212 125763 - 124510 - | major facilitator transporter Bphy_3213 126565 - 126257 - | hypothetical protein TERM 96 127258 - 127241 - R 71 -6.9 -4.1891 | GGCGGGGAAGACAAA CCGCGAC TCCG GCCACGG CATGGCCGGCCGAAC Bphy_3214 127878 - 127285 - | isochorismatase hydrolase Bphy_3215 129148 - 127913 - | major facilitator transporter Bphy_3216 129243 - 129896 + | GntR family transcriptional regulator Bphy_3217 130203 - 130655 + | MarR family transcriptional regulator Bphy_3218 131311 - 130808 - | redoxin domain-containing protein TERM 97 130980 - 131001 + g 93 -4.3 -5.45802 | AGCGCATGACTGAAG TGAGCGCTG CCGT CTGCGATCA TTTTTATTTTGCCCG Bphy_3219 132350 - 131394 - | hypothetical protein TERM 98 132199 - 132164 - G 71 -14 -2.67209 | CACCAATCGAGATGA GGTGAGGACGCGGG GAAAAGCA CCCGCCTCCCCACC GGTTCAACACGGCCC Bphy_3220 133138 - 132359 - | glyoxalase/bleomycin resistance protein/dioxygenase Bphy_3221 134234 - 133275 - | ferredoxin Bphy_3222 134746 - 134321 - | Rieske (2Fe-2S) domain-containing protein Bphy_3223 135818 - 134775 - | amidohydrolase 2 Bphy_3224 136975 - 135815 - | amidohydrolase 2 TERM 99 137930 - 137897 - R 75 -5.9 -4.66833 | gap 1, overlap 137898 TGCGAACGGGAAAAA GGCCTTGGCACGGTCA CAT CG-CCGGACCAAGGCA AATCCCTCACAAACA Bphy_3225 139459 - 137999 - | succinic semialdehyde dehydrogenase TERM 100 139731 - 139710 - R 100 -11.5 -5.24129 | overlap 139712 CTTTTCGAGAAAAAA GACGCCGCG GTCA CGCGGCGTT AAAAGGCTCGGCCCA TERM 101 139729 - 139712 - R 100 -14.1 -4.25873 | overlap 139710 TTTCGAGAAAAAAGA CGCCGCG GTCA CGCGGCG TTAAAAGGCTCGGCC Bphy_3226 141604 - 140183 - | Mn2+/Fe2+ transporter TERM 102 140994 - 140980 - G 100 -2.8 -5.52986 | opp_overlap 140987 ATCCGACGAAAAAAA TTAACG TGG CGATAA CAACCTGCAGAGGTC Bphy_3227 143737 - 142181 - | methyl-accepting chemotaxis sensory transducer TERM 103 143689 - 143711 + g 75 -4.1 -4.6038 | gap 1, opp_overlap 143692 CCAGGCCCATCCACA GCACAGC-CA TCAT TGAGCTGAGC TTTTGATTTAGTGTC TERM 104 143900 - 143911 + r 72 -4.4 -4.63218 | opp_overlap 143873 CCCGTGACTGACAGG TCGT TACA ACGA TTTTGTTGCAGCGGG Bphy_3228 145335 - 143989 - | putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation)-like protein TERM 105 146011 - 146030 + r 71 -7.8 -4.08216 | overlap 146012 CCAAAGATGGGCAAT CTGTCGCG CTCT CGCGACAA TTTTGCAGAAAATCG TERM 106 147743 - 147757 + r 73 -2.8 -4.72986 | GTCCCCGAACTTCAC GAACTG GCT CATTTC TTTTTCCTCGGCATG Bphy_3230 149355 - 148252 - | transposase IS4 family protein TERM 107 149705 - 149676 - R 74 -7 -4.27316 | opp_overlap 149698 TTTGCCAATGCAAAA GACGGCGTCCCC GTGCTA GATGCCGCCGTC GTCGGTTATCCGCCG TERM 108 149792 - 149762 - R 71 -10.4 -3.6106 | overlap 149754 149786 TCGAATATCGGCAAA GGCCGAACTGCTTG TCC CAAAGAGCCCGGCC GGGATGTCGGGTCCG Bphy_3231 150721 - 149975 - | ISPsy22, transposase truncated TERM 109 150369 - 150392 + g 71 -4.4 -4.57073 | overlap 150370 150373 TGCCGCAATGCTTCG CTGTCGCGGA ATCG TCCGCGTCGA TTTTTGGAGAACGTC Bphy_3232 152426 - 151122 - | integrase family protein TERM 110 152490 - 152446 - R 71 -13.2 -2.52676 | gap 2, opp_overlap 152447 TACTCCGCGAACTGA TACCGTGTTTGATACCGTCACG CGC CGTGACGGTATCAAA-ATGG-A TCGTCTGCAGAGAAA TERM 111 152447 - 152490 + r 85 -17 -2.62184 | gap 1, opp_overlap 152446 ACTCCGCGAACTGAT ACCGTGTTTGATACCGTCACG CGC CGTGACGGTATCAAA-ATGGA TCGTCTGCAGAGAAA TERM 112 152616 - 152644 + r 74 -14 -2.56715 | gap 1, opp_overlap 152603 152611 AACCAGGGAATCGCC GGA-CCTCTGCAG ACCA CTGCAGAGGATCC TAAATTACTCCCACT Bphy_3233 153865 - 153284 - | TetR family transcriptional regulator Bphy_3234 154384 - 153893 - | hypothetical protein Bphy_3235 155914 - 154448 - | amidase Bphy_3236 157195 - 158121 + | alpha/beta hydrolase fold protein Bphy_3238 159408 - 159118 - | phage transcriptional regulator, AlpA Bphy_3239 161092 - 159818 - | integrase family protein TERM 113 161192 - 161242 + r 78 -3.2 -5.10933 | gap 1, opp_overlap 161202, overlap 161186 ACGAGTTCAGACGTA TGGAGACAAGCGTCGTTGTGCCG ACCGGA CGGT-CAACGTCGACAGTTTCCA TTTTATTTTCAATCA Bphy_3240 161960 - 161313 - | GTP cyclohydrolase II TERM 114 161430 - 161448 + g 72 -3.1 -4.70626 | overlap 161431 GACGGGAATGCCGTG CTTCGAC AGCGA GTCGAAC TTTTTGGGGTTGTTG Bphy_3241 162301 - 162735 + | signal-transduction protein TERM 115 162810 - 162790 - T 100 -7.6 -5.83226 | gap 1 AAGCCAACAAAAAAA GCCCAATCC GCGA GG-TTGGGC TAAGCCACCTTGCGG TERM 116 162943 - 162967 + T 100 -16.4 -3.9279 | CGAAGCTGCACATGC CCGGGCCGTG CACAC CGCGGCCCGG TTTATCAGGTTGCGT Bphy_3242 163319 - 162993 - | hypothetical protein TERM 117 163565 - 163538 - R 95 -14.8 -3.72576 | gap 1 GCCGCCTGGACGAAA GCCG-GGCCCGCG TTA CCCGGGCCGCGGC GCCTCGCCCGTCAGC Bphy_3243 164188 - 163550 - | DNA-3-methyladenine glycosylase Bphy_3244 164516 - 164872 + | transport-associated TERM 118 164953 - 164923 - f 71 -11.1 -3.32343 | opp_overlap 164925, overlap 164927 GCGATAGTCGGACAA CGCACCGCTCCTC GTCGT GAGGAGCGGTGTT TTTCTTTGTGATGCG TERM 119 164925 - 164951 + F 100 -18.8 -5.40464 | opp_overlap 164923 164927 GATAGTCGGACAACG CACCGCTCCTCG TCG TGAGGAGCGGTG TTTTTCTTTGTGATG TERM 120 164949 - 164927 - f 81 -14.9 -2.59748 | opp_overlap 164925, overlap 164923 TAGTCGGACAACGCA CCGCTCCTC GTCGT GAGGAGCGG TGTTTTTCTTTGTGA TERM 121 165395 - 165381 - g 79 -7 -4.56597 | opp_overlap 165352 165391 GCGGGGCCCGAAAAA GCGGGC CTT GCACGC GATACCGTGTTTGCC TERM 122 165497 - 165530 + G 93 -18.1 -3.42503 | GGACTTCCAGATTCG CGGCGCCAGCGCGGC GCTG GCCGTGCTCGCGTCG TTGTCCGTATTGACG Bphy_3245 165045 - 166193 + | sodium/calcium exchanger membrane region Bphy_3246 167134 - 166232 - | LysR family transcriptional regulator TERM 123 167913 - 167925 + G 70 -2.6 -4.59342 | CGACGATCCGAATGG CGCT ATTTC GGCG TTTCTTTCTGGTCAG Bphy_3247 167368 - 168177 + | extracellular solute-binding protein TERM 124 168873 - 168914 + G 79 -7.2 -4.5442 | gap 1, overlap 168878 168878 168895 GCAAGGGACTTTTCG CAGGCCGC-GCGGCGCGTT CTACC GATGCGTCGCCGCGTCGTG TTTTCTCATTGCGCG TERM 125 168895 - 168912 + G 73 -9.1 -3.8823 | overlap 168878 168873 CGCGGCGCGTTCTAC CGATGCG TCGC CGCGTCG TGTTTTCTCATTGCG Bphy_3248 168221 - 168967 + | polar amino acid ABC transporter, inner membrane subunit TERM 126 169158 - 169168 + G 93 -6.8 -5.17507 | overlap 169156 TCAGGGCACGCCGTT GCTG ATG CAGC TTTTTCTTGCGTTTT Bphy_3249 168964 - 169620 + | polar amino acid ABC transporter, inner membrane subunit TERM 127 169670 - 169683 + T 80 -4.5 -4.91429 | gap 1 TTTGGTTTTGTTTTT CGCTGG CGT CC-GCG TTTTGTTTCCGGTTT TERM 128 170027 - 170045 + T 78 -6.6 -4.6951 | opp_overlap 170029, overlap 170029 GTGGGTCAACGTCAA GACGCTCG GTG TGAGCGGC TTTCTTTTGCCTACT TERM 129 170116 - 170084 - T 100 -9 -4.93877 | overlap 170087 CCGCAGCAAAGAAAA GTAGGTGCCGCCCC GCACA GGGGCAACACCAGC AAACCAGAAGCAAAA TERM 130 170113 - 170087 - T 83 -13.7 -3.34291 | overlap 170084 CAGCAAAGAAAAGTA GGTGCCGCCCC GCACA GGGGCAACACC AGCAAACCAGAAGCA TERM 131 170145 - 170132 - T 70 -4.5 -4.53685 | gap 1 AAACCAGAAGCAAAA CGC-GG ACG CCAGCG CATAAAAGGCAAAGC Bphy_3250 171459 - 170191 - | gluconate 2-dehydrogenase (acceptor) Bphy_3251 173711 - 171471 - | aldehyde oxidase and xanthine dehydrogenase molybdopterin binding TERM 132 172639 - 172662 + g 74 -11 -3.65046 | opp_overlap 172659 172660 TAGACAGCATCGACG CGCGTCTTCG CCTG CGAAAACGCG TTGTTCACGTCGCCG TERM 133 173264 - 173222 - G 84 -16.9 -2.82623 | overlap 173219 CCGCGCTGATAAGCA GCATGCGTGCCGTCGCGCC CGCGC GGCGCATCGGCTCCCATGC GAAGCGAATCGATGT TERM 134 173528 - 173481 - G 82 -16.2 -3.15544 | gap 1, opp_overlap 173486 173487 GTCGATCTGCACGAA TGCGTTCGGCGCGAACACGCCGC TTT GCGGCGTCTCCACGCCGT-CGCC GCCTATCACCGACTT TERM 135 173679 - 173637 - G 81 -11.9 -3.92522 | gap 1, opp_overlap 173646 173649 GCTGAACTTGAGAAA CGTGCGGCGCGA-GACGGCC GCGT GACCGTCATCGCGCGGCTTG CCGTTTTGCGCATCG Bphy_3252 174168 - 173713 - | 2Fe-2S iron-sulfur cluster binding domain-containing protein TERM 136 174447 - 174419 - R 100 -19 -4.183 | opp_overlap 174423 CCAATGCGGAAGAAA CGAAGCAGCGCA GCCCT TGCGCTGCTTCG TCGGAGAACAGGCCT TERM 137 174423 - 174443 + r 79 -13.3 -3.14132 | opp_overlap 174419 TGCGGAAGAAACGAA GCAGCGCAG CCC TTGCGCTGC TTCGTCGGAGAACAG Bphy_3253 179090 - 174462 - | cellulose synthase domain-containing protein TERM 138 178226 - 178257 + gr 83 -13.6 -3.40403 | CCGCGAAGCCTTCGG CGACGGTGCGGCCG CGTG CGTCTGCACCGGCG TTCTGCTGCGCGCGC TERM 139 178260 - 178287 + gr 73 -12.6 -2.74192 | overlap 178257 GTCTGCACCGGCGTT CTGCTGCGCGCG CTCG CTCGCGCGGCGG TCCTGTTCCGAGATC Bphy_3254 180295 - 179063 - | cellulase TERM 140 179345 - 179298 - GR 74 -11.2 -3.53811 | opp_overlap 179311 179312, overlap 179300 179323 CCGAGCGCGCGGAAA TACGGCAGGAGCGCGCCCCA GAAACCAA TGGGGCCTTCTCCCGCCGCA TTGCCCGTGGTCGTC TERM 141 179343 - 179300 - GR 73 -11.6 -3.34715 | opp_overlap 179311 179312, overlap 179298 179323 GAGCGCGCGGAAATA CGGCAGGAGCGCGCCCCA GAAACCAA TGGGGCCTTCTCCCGCCG CATTGCCCGTGGTCG Bphy_3255 182861 - 180297 - | cellulose synthase subunit B TERM 142 181843 - 181805 - G 81 -16.6 -2.73875 | opp_overlap 181803 181807, overlap 181802 TGGTCGCGAACACCA CGGCGTTGCCCGACAGCG GCG CGTTGTCGAGCTGCGCCG GAAAGAGCGCGCCGC TERM 143 182823 - 182841 + g 77 -16 -2.62396 | CACACCCGTTCTCAT CGCCGCTG CAA CAGCGGCG TCGTATCGCAAGATC Bphy_3256 185096 - 182865 - | cellulose synthase catalytic subunit (UDP-forming) TERM 144 184416 - 184454 + g 74 -11.6 -3.61398 | overlap 184403 184406 GTTGCCCGCCTTCGC GTGGCGGTTGTGCGAGCG GAT CGTCCACGCAACCCCCAC TTCTTCACAGAACGC TERM 145 185066 - 185024 - G 74 -14.9 -2.54523 | gap 2 TCAGATGCGAAGCCA GCCGGTCGAAGCGCGAGCGGC GCG GCGGCTCG-GCGTCGAC-GGC ATCGAGAATGTCTTC Bphy_3257 185881 - 185093 - | cellulose synthase operon protein YhjQ Bphy_3258 186762 - 185878 - | hypothetical protein TERM 146 186272 - 186303 + g 72 -8.6 -4.1822 | gap 1 GGTGCTGCAACCGGG GCAGCCGCCATGCGC ACA GCGT-TCGCGGCCGC TTTCTTGCGCTCGGC Bphy_3259 187315 - 186860 - | hypothetical protein TERM 147 187483 - 187465 - H 100 -14.6 -4.84761 | overlap 187470 AGATGCCGATAAAAA GGCAACCG GCA CGGTTGCC GATGTGGAAAGCGGG TERM 148 187902 - 187875 - g 70 -5.5 -4.30576 | gap 1 TCTCGACGACGAAAA GGCCACGA-GCG CCGAC CGCGTAGCGGCC ATCGAAGCCGTCGCA Bphy_3260 187645 - 188052 + | hypothetical protein Bphy_3261 188143 - 188961 + | alpha/beta hydrolase fold protein TERM 149 189051 - 189011 - T 87 -12.6 -3.93369 | opp_overlap 189015 189039, overlap 189017 GCAACCGCAAGCAAA CAGAAAGGCTCCCGCGAA GCGCA TTCGCCGGAGGCTCTCCG TTACGTATCACGTCG TERM 150 189045 - 189017 - T 81 -8.8 -4.40184 | opp_overlap 189015 189039, overlap 189011 GCAAGCAAACAGAAA GGCTCCCGCGAA GCGCA TTCGCCGGAGGC TCTCCGTTACGTATC Bphy_3262 190076 - 189081 - | peptidase M23B TERM 151 189465 - 189443 - G 74 -14.9 -2.62184 | opp_overlap 189442 189433 GCGCCGGCCAGATGA GCGTCACGC CTTTT GCGTGACGC GCCACCTCGGCATTC TERM 152 189486 - 189542 + g 81 -16.5 -2.5805 | gap 3, overlap 189495 189514 189528 CTCGGCATTCACTTC GCGTGCTTCGGCCGCGCTCGGCG-CGGG TGCG CCCGGCGCAG-GCGCGGCGGCGGC-CGC CTTATCCGGGGTGCT TERM 153 189495 - 189543 + g 77 -13 -3.30441 | overlap 189486 189514 189528 CACTTCGCGTGCTTC GGCCG-CGCTCGGCGCGGGTGCGC CCG GCGCAGGCGCGGCG-GCGGCCGCC TTATCCGGGGTGCTG TERM 154 189953 - 189972 + g 72 -2.8 -4.63527 | gap 1, overlap 189951 189957 CCGTTGCCGTTTGCG CGGTCGACG CCG CGTTG-CTG TTTTTCGCGTCCTGC Bphy_3263 190482 - 190889 + | hypothetical protein Bphy_3264 191668 - 190913 - | DeoR family transcriptional regulator Bphy_3265 191830 - 192417 + | NUDIX hydrolase Bphy_3266 192872 - 193870 + | AraC family transcriptional regulator Bphy_3269 195551 - 194427 - | glycosyl transferase group 1 Bphy_3270 196534 - 195548 - | hypothetical protein TERM 155 195625 - 195614 - G 70 -5.8 -4.2704 | CGCATCACGAACAAA GGCA AGAA TGCC GGCCCCCTCTATCAC Bphy_3271 197058 - 196534 - | satase isoform II Bphy_3272 198257 - 197055 - | capsule polysaccharide biosynthesis protein TERM 156 197096 - 197081 - G 100 -8.2 -5.06451 | opp_overlap 197082 CATCATTTGAAAAAA CACGCC GTGC GGCGCG GGGGTCGATTGGACC TERM 157 197518 - 197508 - G 75 -3.2 -4.81249 | overlap 197515 197516 CTGCAAAGGCAAAAA GACA TAA CGTC GCGAGATCAACGCGT TERM 158 198156 - 198142 - G 76 -5.7 -4.57581 | AGTCGAAAGAATAAA TGAGC AAGCG GCTCA CTGGTCATAAAGACG Bphy_3273 199540 - 198284 - | polysaccharide biosynthesis protein TERM 159 198396 - 198380 - G 71 -7.9 -4.19817 | GCCAGCGACCGAAAA TGCCCGG ATA CTGGGCA GAACAGAAAGCCGCA Bphy_3274 200294 - 199683 - | undecaprenyl-phosphate galactose phosphotransferase Bphy_3275 202092 - 200998 - | hypothetical protein TERM 160 201237 - 201223 - G 78 -4.4 -4.8269 | GACAATGACTAAAAA TATTAT CCA ATAATA GGGAGATACTTTTAA TERM 161 201959 - 201949 - G 70 -5.4 -4.35085 | opp_overlap 201949 201950, overlap 201950 ATCTGTAAAAAAATA TGCT GGC AGCA GCTTTTCCTTAGTTA TERM 162 201950 - 201961 + g 76 -5.8 -4.50193 | opp_overlap 201949 201950, overlap 201949 TCTGTAAAAAAATAT GCTG GCAG CAGC TTTTCCTTAGTTAAT Bphy_3276 204337 - 202127 - | exopolysaccharide tyrosine-protein kinase Bphy_3277 204793 - 204356 - | protein tyrosine phosphatase Bphy_3278 206027 - 204855 - | polysaccharide export protein TERM 163 206295 - 206346 + G 80 -15 -3.13403 | gap 1, opp_overlap 206308 206309, overlap 206293 ACAGCCCCCCATTCC CGCCTCACCGAAACCGCGCTGCGCG CCG CCCGC-GCACCGTCTCGGCGAGGCG TATTGCTGAAAAAGC TERM 164 206409 - 206436 + G 79 -2.6 -5.02323 | AAAAACCGTCTGATC GAGCTGGACTTC TTCC GAGGGCTGGTTC TTTTATTTATCGTCG Bphy_3279 206229 - 207485 + | hypothetical protein Bphy_3280 208644 - 207559 - | hypothetical protein TERM 165 207857 - 207844 - G 73 -5.9 -4.3739 | overlap 207846 GACCGGTGCACAAAA CGGCA GCAT CGCCG CAATCGCCGTGACGA Bphy_3281 209021 - 209308 + | hypothetical protein Bphy_3282 210291 - 209356 - | alpha/beta hydrolase domain-containing protein Bphy_3283 210837 - 210346 - | hypothetical protein Bphy_3284 211889 - 210924 - | 3-hydroxyacyl-CoA dehydrogenase NAD-binding TERM 166 211385 - 211411 + g 86 -18.8 -2.52464 | opp_overlap 211380 211379 TGCGATAAATTTGCA TGGCGGCATCGA CAG TCGATGCCGCCG TCCGTTCACCGCCCA TERM 167 211944 - 211962 + r 86 -8.8 -4.56597 | CGGTCACCAATCAGG CGAGCTGT TCG ACAGCGCG TTTTTCGAGCGGCCG Bphy_3285 212868 - 211939 - | hypothetical protein TERM 168 212683 - 212705 + g 73 -12.6 -3.32844 | opp_overlap 212679 TTCGCGATACAGGTT CGGATCGCGG CTG CCGCGGCCCG TTCTGGGATCGCGCA Bphy_3286 213905 - 212955 - | choline ABC transporter, periplasmic binding protein TERM 169 213613 - 213624 + g 72 -7.2 -4.25104 | opp_overlap 213613, overlap 213593 TTCGCCTCGACAAAA GGCG CAAT CGCC TTTTCCTGCACCGGC TERM 170 213624 - 213613 - G 75 -7.2 -4.36914 | opp_overlap 213593 213613 TTCGCCTCGACAAAA GGCG CAAT CGCC TTTTCCTGCACCGGC Bphy_3287 214220 - 215215 + | AraC family transcriptional regulator Bphy_3288 216429 - 215287 - | porin TERM 171 216407 - 216421 + g 78 -2.8 -4.93365 | GCGACGCCTGTCAGT GCTG CGGCATT CAGC TTTTTCATTGTAGCG TERM 172 216625 - 216592 - R 91 -5.1 -5.56568 | opp_overlap 216592 216613 216615 216616, overlap 216595 216617 ACACGACTAAAAAAA GAAGCGCGCGTGTCA TAAA TGAAAAGCGCGCGGC CTTTGCGGCTGCGCG TERM 173 216622 - 216595 - R 93 -9.8 -4.8487 | opp_overlap 216592 216613 216615 216616, overlap 216592 216617 CGACTAAAAAAAGAA GCGCGCGTGTCA TAAA TGAAAAGCGCGC GGCCTTTGCGGCTGC TERM 174 216613 - 216645 + r 79 -6.8 -4.58685 | opp_overlap 216595 216592 216617, overlap 216592 216615 216616 CGCGTGTCATAAATG AAAAGCGCGCGGCC TTTGC GGCTGCGCGCGCTC TTTTTGAAGCACTTT TERM 175 216615 - 216643 + r 75 -9.4 -3.90316 | opp_overlap 216595 216592 216617, overlap 216592 216613 216616 CGTGTCATAAATGAA AAGCGCGCGGCC TTTGC GGCTGCGCGCGC TCTTTTTGAAGCACT TERM 176 216616 - 216642 + r 74 -12.9 -2.93708 | opp_overlap 216595 216592 216617, overlap 216592 216615 216613 GTGTCATAAATGAAA AGCGCGCGGCC TTTGC GGCTGCGCGCG CTCTTTTTGAAGCAC TERM 177 216641 - 216617 - R 100 -14.2 -4.61873 | opp_overlap 216592 216616 216615 216613, overlap 216595 216592 TGTCATAAATGAAAA GCGCGCGGCC TTTGC GGCTGCGCGC GCTCTTTTTGAAGCA Bphy_3289 217636 - 216671 - | choline ABC transporter, periplasmic binding protein Bphy_3290 219219 - 217678 - | choline-sulfatase TERM 178 218133 - 218171 + g 72 -11.7 -3.53444 | gap 1 GGCTGCGTCCGTCGA TGGTATCCGGC-CACTCC GCAC GGCGTGCGCCGGTTGCCA TTTCGAGCAGCGTGG TERM 179 218669 - 218647 - G 72 -6.9 -4.21194 | gap 1, opp_overlap 218665 218667, overlap 218648 CGCGACCACGCAAAA CGGCCGCGCG TCGC CGCCC-GCCG CGCGCTCACGCACGA TERM 180 219533 - 219569 + G 70 -13.8 -2.55351 | gap 2, overlap 219532 CGCCGTTGTTCGAGC GCGGCCATCGCGGCGTGA CAC TCACGCC-CGAAGGC-GC ATTGCTATACGAAGC Bphy_3291 219364 - 220290 + | LysR family transcriptional regulator TERM 181 220507 - 220521 + G 72 -7 -4.2461 | GCCGCCGGACAGGTT GCCGCC ATC GTCGGC TTTCTTGATCGGCAT Bphy_3292 220438 - 221316 + | formyltetrahydrofolate deformylase TERM 182 221358 - 221319 - T 74 -12.9 -3.01712 | gap 3, overlap 221303 221322 TGTCGTGCTGTAACA GCATGAGCCGCCGCG-CCGC ATC GCGGACGCGGCGGCG-A-GC ATCAGGCGATGCTCA TERM 183 221356 - 221322 - T 80 -14.3 -2.73875 | overlap 221303 221319 CGTGCTGTAACAGCA TGAGCCGCCGCG-CCGC ATC GCGGACGCGGCGGCG-A GCATCAGGCGATGCT Bphy_3293 223038 - 221371 - | amino acid permease-associated region TERM 184 222400 - 222388 - G 73 -9.1 -3.85817 | ATCGCCCGTGACAAA CGGCA CGA TGCCG ACAATTAGCAGCGGC TERM 185 223144 - 223092 - R 88 -11.5 -4.21773 | gap 2, opp_overlap 223092 223093, overlap 223093 CTGGAACACAAACAA CCGTGACACGGCGATGCGAATGCGC GCGCA GCGCATTCGCATCGCCAT--CAAAA CCCTTATCAGAACGC TERM 186 223143 - 223093 - R 76 -12.8 -3.12341 | gap 2, opp_overlap 223093 223092, overlap 223092 TGGAACACAAACAAC CGTGACACGGCGATGCGAATGCGC GCGCA GCGCATTCGCATCGCCAT--CAAA ACCCTTATCAGAACG Bphy_3294 224038 - 223175 - | substrate-binding region of ABC-type glycine betaine transport system TERM 187 223458 - 223474 + g 72 -6.5 -4.21319 | CAGTGTGGGACCCAT CCCGTGA CGA TCACAGG TTTATTGGCATTCAT TERM 188 224156 - 224172 + r 81 -12.3 -3.65135 | overlap 224151 TGGCTTTTTTTCTGT CTGCGAC GCA GTCGCAG TTCTGGTTCTTTCGC TERM 189 224228 - 224218 - R 85 -2.4 -5.63374 | GCAACAGCAAAAAAA CCGG GCG CCGC AGGCAAGATCACTTA Bphy_3295 225394 - 224237 - | oxidoreductase FAD-binding subunit Bphy_3296 226727 - 225447 - | Rieske (2Fe-2S) domain-containing protein Bphy_3297 227548 - 226769 - | electron transfer flavoprotein beta-subunit Bphy_3298 228723 - 227545 - | electron transfer flavoprotein alpha subunit TERM 190 228516 - 228569 + g 79 -10.2 -4.07687 | gap 1 CGAGCGCGCCACGGT CGCTGTGCGCGAC-CACGAGCAGTG TGCGC TGCGGCGCCTGCGTCGTGCGCAGCG TTTTAGCGGCAGCAT Bphy_3299 230646 - 228727 - | hypothetical protein Bphy_3300 232712 - 230649 - | NADH:flavin oxidoreductase/NADH oxidase TERM 191 231522 - 231559 + g 84 -13.3 -3.69483 | gap 1, overlap 231545 231549 CAGTCCCGCCGGACC CGCGCCGACCACGACCAC CTT GCGG-CGCGGTCCGCGCG TCTTTTCGATCACGT Bphy_3301 233299 - 232766 - | 4-vinyl reductase 4VR TERM 192 232840 - 232854 + g 71 -12.8 -3.02511 | GCACTTCTTTCGACT GCGCGC GCG GCGCGC TCTTGCCGCCGTCAG Bphy_3302 234304 - 233333 - | membrane dipeptidase TERM 193 233677 - 233709 + g 89 -12.8 -4.053 | gap 1, opp_overlap 233677 233675 GGAACGGCGAGAACA TCGTC-ACGCCGACG AAGC CGTTGGCGTCGGCGA TTTCTCTCAGCTGCT Bphy_3303 235622 - 234348 - | glycine hydroxymethyltransferase TERM 194 234532 - 234549 + g 72 -6.9 -4.2349 | opp_overlap 234531 234530, overlap 234533 234546 GTGCCGAGACGAATG CCCGACG TCAC CGTCGGC TTTTCCGTATCGAAC TERM 195 235109 - 235128 + g 75 -7.8 -4.24948 | opp_overlap 235089, overlap 235089 CAATGAGCATCGACG GCTTGTGC TCAT GCGCGAGC TTTTCGATCTGGTCA Bphy_3304 236125 - 237141 + | AraC family transcriptional regulator TERM 196 237218 - 237231 + F 70 -3.7 -4.67011 | CGGTCTCGGCCTCTG CGCTG GCAT CTGCG TTTTTGCATCGGGTT TERM 197 237251 - 237275 + F 91 -7 -5.27335 | overlap 237253 TGCATCGGGTTGCTG GCGTTGCCCC TGTGC GGGGCGGCAC TTTTTCTTTGCCGCG TERM 198 237690 - 237658 - f 80 -4.6 -4.90525 | overlap 237661 GAATGGCAAAGAAAA GTAGGTGCCGCCCC GCACA GGGGCAACGCCAGC AAACCAGACGCAAAA TERM 199 237776 - 237733 - f 80 -4.4 -4.88222 | gap 1, opp_overlap 237747, overlap 237736 ACGAAAAGCCAAAAA GCAGACGCGCGC-CACCGTGT CGC AGACGGTTTGCGCGCACCATC CCACTGCGCTAAGGT TERM 200 238291 - 238278 - g 71 -8.1 -4.07568 | GCGCGCGCGTGAAAA CGACG GGTT CGTCG GCGTCGGGCCCTTGC TERM 201 238879 - 238894 + G 75 -10.4 -3.87373 | opp_overlap 238878 ACTCGCGCAACGCAC GCGCAC TCAA GTGCGC TTTCTCGACGATGTG Bphy_3305 237827 - 240382 + | ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent TERM 202 240533 - 240567 + G 95 -18.7 -3.8591 | gap 1, overlap 240525 GGATCGGATTGATTG CGCGCC-GCAATCCAG TTCT CTGGGTTGCCGGCGCG TTATTGCTTCTGCAC Bphy_3306 240484 - 241029 + | hypothetical protein TERM 203 241109 - 241079 - T 100 -16.3 -5.71712 | gap 1 CGCCATATAAAAAAA TGCTGCGT-GCCTC GTGA GAGGCAACGCAGCA TCGTCCATGATAAGG Bphy_3307 242376 - 241177 - | formaldehyde dehydrogenase, glutathione-independent TERM 204 242493 - 242504 + H 88 -5.8 -5.20534 | opp_overlap 242462 242492 242487, overlap 242487 242484 CTGAACCGACAAAGC CGGT CGGG ACCG TTTTTGTTGATTGAT TERM 205 242847 - 242813 - g 75 -7.8 -4.26903 | gap 1, opp_overlap 242831 242832, overlap 242816 242818 CGCATCGCAGCAAAA GC-ACAGCCGCGCGC GCGCTT GCGCGCGATCGTCGC GGCGAATTTCGATGT Bphy_3308 242573 - 243163 + | TetR family transcriptional regulator TERM 206 244387 - 244360 - g 70 -5.4 -4.371 | overlap 244361 GCGACGACATGAAAA TCGTGCGCGAAG AAAT CTTCGGGCCCGT GATGAGCATCCTCAG Bphy_3309 243216 - 244685 + | betaine aldehyde dehydrogenase TERM 207 245292 - 245314 + G 80 -16.2 -2.87132 | TGACGGCCAACGGCC GCCGCGCGAG CAC CGCGCGCGGC TATCTGGACCAGGCG Bphy_3310 244697 - 246415 + | choline dehydrogenase TERM 208 246450 - 246421 - f 71 -12.9 -2.52491 | opp_overlap 246422, overlap 246420 TACACATTGACGAAT GCGTGCGCGTCAT GCAA ATGACGCACACGT TCCATCCCAATGCCG TERM 209 246422 - 246449 + F 83 -14.2 -3.06183 | opp_overlap 246421 246420 ACACATTGACGAATG CGTGCGCGTCAT GCAA ATGACGCACACG TTCCATCCCAATGCC TERM 210 246609 - 246585 - g 81 -13.6 -3.53091 | gap 1, opp_overlap 246603 ACTGCTTCCGCCAAA CGAGCCAGCGC TGCT GCGC-GGCTCG AACGCCTGCCGTTTT Bphy_3311 246561 - 247985 + | major facilitator transporter Bphy_3312 249457 - 248282 - | metallophosphoesterase TERM 211 249638 - 249626 - R 85 -3.4 -5.36441 | overlap 249611 GTGTCACACAAAAAA GGTT TGTGT AACC GTTCGTGAGGCGCGC Bphy_3313 251040 - 249700 - | response regulator receiver protein TERM 212 250077 - 250058 - G 84 -6.4 -4.72846 | gap 1, overlap 250050 250059 GCACACACGGAAAAA CCCCG-CAC GTT GTGACGGGA ATCTGAGCGGAAGCT TERM 213 250219 - 250185 - G 100 -15.9 -4.67755 | gap 2, opp_overlap 250205, overlap 250187 250188 AGAGCGACGCAAAAA GACGCGCGTGCAGACGA TGC TCGTCTGCA-GCGCG-C TGCAAGCCGATATGT TERM 214 250218 - 250187 - G 100 -19.6 -3.95214 | gap 1, opp_overlap 250205, overlap 250185 250188 AGCGACGCAAAAAGA CGCGCGTGCAGACGA TGC TCGTCTGCA-GCGCG CTGCAAGCCGATATG TERM 215 250219 - 250188 - G 93 -19.6 -2.96405 | gap 1, opp_overlap 250205, overlap 250187 250185 GCGACGCAAAAAGAC GCGCG-TGCAGACGA TGC TCGTCTGCAGCGCGC TGCAAGCCGATATGT TERM 216 251753 - 251775 + r 90 -10.5 -4.58395 | opp_overlap 251741, overlap 251754 TAAGCCGGAATCTTT CGGCCGACC TTCAT GGTCGGCCA TTTTTCAGCCGTACC TERM 217 251754 - 251774 + r 83 -14 -3.34716 | opp_overlap 251741, overlap 251753 AAGCCGGAATCTTTC GGCCGACC TTCAT GGTCGGCC ATTTTTCAGCCGTAC Bphy_3314 252279 - 251800 - | OsmC family protein TERM 218 252076 - 252064 - G 81 -7.7 -4.46112 | CGCGATCGAAAGAAA CCACA GCA TGTGG CAACTCGACAGCGCT Bphy_3315 253243 - 252311 - | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding Bphy_3316 253849 - 253337 - | hypothetical protein Bphy_3317 254978 - 253962 - | aldo/keto reductase TERM 219 254237 - 254262 + g 73 -11.8 -3.31144 | TCTTGCGCAGCGCTT CGACGAGCGC CAGGTT GCGCTCGACG TTCTCGCCCTGGAAG Bphy_3318 255079 - 255990 + | LysR family transcriptional regulator Bphy_3319 256270 - 256007 - | hypothetical protein TERM 220 256374 - 256334 - R 84 -13.2 -3.73224 | gap 1, overlap 256341 GCAGTGCGCATGAAA CGGCAAAGCGGCGCGTCCC GCAA GCGGCGCGCCGCC-TACCG TTGACGTTGCCGTCT TERM 221 256368 - 256341 - R 88 -14 -3.73107 | overlap 256334 GCATGAAACGGCAAA GCGGCGCGTCCC GCAA GCGGCGCGCCGC CTACCGTTGACGTTG Bphy_3320 257211 - 256390 - | alpha/beta hydrolase fold protein TERM 222 257495 - 257521 + H 78 -10.9 -3.74158 | gap 1 CGAAGAGGCTGGGCG CGGGCA-CGGTC GCGG GATCGGTGCCCG TTTCCATGTCGTTGC TERM 223 257583 - 257544 - H 73 -12.2 -3.05384 | gap 2, opp_overlap 257550 GTCGTTGCGATGTAA CGCGAGCGCCCTGACGCC CGCTTC GGCGGCAGG-CG-TCGCG GCGTTTTACGACGCA TERM 224 257550 - 257586 + H 95 -13.6 -4.08216 | opp_overlap 257544 GCGATGTAACGCGAG CGCCCTGACGCCCGCT TCGGC GGCAGGCGTCGCGGCG TTTTACGACGCATGA Bphy_3321 257813 - 259000 + | hypothetical protein Bphy_3322 259350 - 259036 - | hypothetical protein TERM 225 259903 - 259859 - g 90 -15.9 -3.65046 | gap 1, opp_overlap 259856 TCCCGACGGCAACAA GCTTTGCGTGTGCTGTCACG GCCCTG CGTGACAGCAC-CACAGAGC ACTTGCGACACACGC Bphy_3323 259497 - 259889 + | glyoxalase/bleomycin resistance protein/dioxygenase Bphy_3324 260909 - 259923 - | AraC family transcriptional regulator TERM 226 260649 - 260592 - G 70 -7.9 -3.99957 | gap 4, overlap 260585 CGAAATACCGAGAAA CG-GCTCGTCGATGCTCGCTTCCGTCTCG CATT CGA-ACGGCAGCG-GCACGGAC-AGCACG AGATACTGCTGCGCA Bphy_3325 261296 - 262348 + | alcohol dehydrogenase TERM 227 262477 - 262499 + F 72 -5.5 -4.49981 | gap 1, overlap 262463 ACCGGCGCGCCGTCC CGCTGACGGC GCAC GCCG-CGGTG TTTTCTGCTGGTCTG Bphy_3326 262534 - 263493 + | LysR family transcriptional regulator Bphy_3327 263881 - 263456 - | polymorphic membrane protein, filamentous haemagglutinin/adhesin TERM 228 263901 - 263930 + r 80 -2.2 -5.28166 | gap 1 ATCCCCGAACGCGGC TGAACACGAGCCG GTAAG TGG-TCTTGTTCA TTTTTATTCGTTTTA TERM 229 264112 - 264096 - R 100 -10.8 -5.40072 | opp_overlap 264110 GTCGGCCGAAAAAAA GCCCGC ACTTG GCGGGC GTTGAAGATAATCGC TERM 230 264373 - 264349 - R 73 -3.4 -4.78326 | overlap 264352 264353 TGGCAAAGAAAGAAA GTACCGCCCC GCACA GGGGCAACGC CTGAAGTACGAAGGC Bphy_3328 264717 - 264451 - | hypothetical protein Bphy_3329 265139 - 264726 - | dihydroneopterin aldolase Bphy_3330 265819 - 265169 - | sarcosine oxidase gamma subunit TERM 231 265636 - 265613 - G 73 -9.4 -3.94409 | GACAGCATTGACAAA CGCCGCGTCG CGCA CGTCGCCGCG CAGATTCACGAGATC Bphy_3331 268808 - 265809 - | sarcosine oxidase alpha subunit family protein TERM 232 268461 - 268437 - G 72 -7 -4.25104 | opp_overlap 268437 GGTCTTGTAGTAAAA GCCCGCGGGC ATGAA GCGCGCGAAC TTCTGATTGATGGCC Bphy_3332 269104 - 268805 - | sarcosine oxidase delta subunit heterotetrameric Bphy_3333 270427 - 269183 - | sarcosine oxidase beta subunit family protein Bphy_3334 271850 - 270462 - | L-serine dehydratase 1 TERM 233 270983 - 271002 + g 74 -10.6 -3.76048 | TGGTCGGCGCGGTGA CGACGCGG CCGC CCGCGGCG TTCTCTTCGTTGACG TERM 234 271968 - 271942 - H 86 -5 -5.27206 | overlap 271943 CAGATAGAACAAAAA CGGCATCGACGT GGG ATGGCGACGCCA GAGCGGGTTGCCACT TERM 235 272041 - 272014 - H 72 -4.8 -4.65895 | gap 1, opp_overlap 272019, overlap 272020 CCGGTGACGGAAAAA CAC-AAGTCCGGG CGG CCCGGGGTTCGTG GGATGGCAACCCGCA Bphy_3335 272194 - 273279 + | AraC family transcriptional regulator Bphy_3336 274375 - 273398 - | hypothetical protein TERM 236 274056 - 274037 - G 78 -10 -3.97834 | gap 1 CAAGCTGATCAGAAA CGCG-GCGT TGG ACGCACGCG TCAGCGAAATCCCGA Bphy_3337 274459 - 275385 + | LysR family transcriptional regulator TERM 237 275461 - 275424 - f 100 -17.9 -4.07568 | opp_overlap 275431, overlap 275431 GGTTTCGTCTGAAAA CAAAAAAGGCGAAGAGG CCAC CCTCTTCGCCTTTCCCG CACGCATCCATTCAA TERM 238 275431 - 275454 + F 91 -16.8 -3.53224 | opp_overlap 275424 275431 TCTGAAAACAAAAAA GGCGAAGAGG CCAC CCTCTTCGCC TTTCCCGCACGCATC TERM 239 275454 - 275431 - f 100 -16.8 -5.79595 | opp_overlap 275431, overlap 275424 TCTGAAAACAAAAAA GGCGAAGAGG CCAC CCTCTTCGCC TTTCCCGCACGCATC Bphy_3339 275782 - 276228 + | hypothetical protein TERM 240 276317 - 276329 + G 70 -2.7 -4.65895 | opp_overlap 276326 GATCGTCTTTACAGA TGGAT TCA ATTCA TTTTTGAATCACACA Bphy_3340 276225 - 276464 + | hypothetical protein Bphy_3341 276474 - 276956 + | hypothetical protein TERM 241 276987 - 276964 - T 100 -16.8 -5.14563 | opp_overlap 276964, overlap 276941 GCCGTTAGCAAAAAA GGCGAAGAGG CGAC CCTCTTCGCC TTTCCCATCCTCATC TERM 242 276964 - 276987 + T 91 -16.8 -3.62572 | opp_overlap 276941 276964 GCCGTTAGCAAAAAA GGCGAAGAGG CGAC CCTCTTCGCC TTTCCCATCCTCATC Bphy_3342 278456 - 277017 - | glucose-6-phosphate 1-dehydrogenase Bphy_3343 279645 - 278728 - | ornithine cyclodeaminase/mu-crystallin Bphy_3344 280676 - 279669 - | proline racemase TERM 243 280188 - 280158 - G 79 -2.5 -4.99043 | gap 1 CGTGTAGAAATAAAA CGCGC-CGCCGA ACGCAATG TCGCCGAGCACG GTGCCGAAGCCCGGG Bphy_3345 281449 - 280799 - | hypothetical protein Bphy_3346 282786 - 281446 - | FAD dependent oxidoreductase Bphy_3347 283241 - 284095 + | response regulator receiver protein Bphy_3348 285960 - 284134 - | integral membrane sensor hybrid histidine kinase Bphy_3349 286478 - 285957 - | oxidoreductase molybdopterin binding TERM 244 286698 - 286685 - g 75 -3.1 -4.72272 | gap 1, overlap 286686 286687 GTCCGTCATGAAAAA GCCGGT TTT ACCG-C TGACCTACGAACAGC TERM 245 286763 - 286779 + G 71 -7.9 -4.07885 | GCTCGAAGAGCGCTT TGCCGCC GCC GTCGGCA TTTTACGGGGCGGTG TERM 246 286785 - 286841 + G 86 -13 -3.89346 | gap 2 GCCGTCGGCATTTTA CGGGGC-GGTGCGCCGCTGGCGT-TGAT GGC ATCGCACGCCGTCGGCGTGCCCGTCGCG TTTCTCAGCTACGAC TERM 247 287041 - 287069 + G 72 -3 -4.62302 | gap 1, opp_overlap 287032 287030 AAATCAGCCGCATCC GCCCGGA-CTACG CCAA CGACGCTTCGGGC TTTTTCGCGCTGTTC TERM 248 287490 - 287443 - g 77 -11.3 -3.80014 | gap 3, opp_overlap 287452 287487 ACAGCCACGACGAAA CGC-CCGAAGGCGCCGCCGCGCAC AAG GCG-GCCGCGGCGC-TTCGTTGCG GTGTCACGCATTTCG TERM 249 287452 - 287481 + G 77 -12.8 -3.36785 | gap 1, opp_overlap 287443 ACGAAACGCCCGAAG GCGCCGCCG-CGC ACAAG GCGGCCGCGGCGC TTCGTTGCGGTGTCA Bphy_3350 286677 - 287624 + | phosphoribosyltransferase Bphy_3351 289373 - 287700 - | NERD domain-containing protein TERM 250 289460 - 289450 - H 84 -2.4 -5.41941 | opp_overlap 289450 GAAAGGAAAGAAAAA CCCG CTT CGTG TATCGTAACTGGTTG Bphy_3352 289532 - 290158 + | glutathione S-transferase domain-containing protein TERM 251 290427 - 290410 - g 100 -9.1 -5.00884 | ATCTTGGCGAAAAAA CGGGCAA GTTC CTGCCCG CCAGCCTGCGCGACC Bphy_3353 290163 - 290789 + | glutathione S-transferase domain-containing protein TERM 252 291387 - 291373 - g 75 -7 -4.35524 | overlap 291374 CGCGCAAATCGAAAA CGCCGG ATA CCGGCT CGCCGGTGACGGAAT Bphy_3354 290876 - 291469 + | ferric uptake regulator family protein Bphy_3355 291965 - 291489 - | two component Fis family transcriptional regulator Bphy_3356 293081 - 292338 - | TetR family transcriptional regulator TERM 253 292957 - 292998 + g 88 -17.9 -3.01712 | gap 1 CCGGATGGGCGGCCG GGTCGGCGCGCG-GCGGGCT CCG GGCGCGCTCGCGCGCCTGCC TCTTCAACGCCGCCA TERM 254 294391 - 294361 - g 75 -6.8 -4.36914 | opp_overlap 294382 CCTTGCCGTACAAAA CGCAGTGCCG TTCAAACATCT CGGCACGGCG ACGTCGGGCGCCACG TERM 255 294438 - 294455 + G 91 -6.9 -5.00616 | overlap 294434 294435 GCGGCTCGGTGGGCG TCGCGGC TTTC GGCGCGA TTTTTTCGAACGGAC Bphy_3357 293171 - 294688 + | EmrB/QacA family drug resistance transporter TERM 256 294786 - 294810 + F 100 -14.9 -4.86731 | opp_overlap 294780 TTTCAGAAATTCGCA GGCCGGTCGCG AAG TGCGCCCGGCC TTTTGTTTGAGCGCG TERM 257 295178 - 295204 + G 80 -14.4 -3.31792 | overlap 295172 295169 CCGTGTACACGTTGC GGCGGCGTGCTG TAT CAGCATGCCGAC TTCTGCCCGTACTGC TERM 258 295881 - 295846 - g 85 -11.8 -4.12902 | gap 1 GAAGGACCGCGAAAA CAGGCGTGACGCCGCGC TCG GCGTGGCGA-ACACCTG TGCGAAAGACAAACT Bphy_3358 295124 - 296236 + | hypothetical protein Bphy_3359 296356 - 297456 + | TRAP transporter solute receptor TAXI family protein TERM 259 297484 - 297522 + T 100 -18.2 -3.14132 | opp_overlap 297485 297489, overlap 297490 AGCAGAGCCACCAGA AGAAAGCGCCACGGCGCG CGA TGCGTCGTGGCGTTTTCG TTGCTGCGCGACAGG TERM 260 297521 - 297485 - T 90 -16.6 -3.43492 | opp_overlap 297484 297490, overlap 297489 GCAGAGCCACCAGAA GAAAGCGCCACGGCGC GCGAT GCGTCGTGGCGTTTTC GTTGCTGCGCGACAG TERM 261 297517 - 297489 - T 90 -11.6 -4.35885 | opp_overlap 297484 297490, overlap 297485 AGCCACCAGAAGAAA GCGCCACGGCGC GCGAT GCGTCGTGGCGT TTTCGTTGCTGCGCG TERM 262 297490 - 297516 + T 100 -18 -4.45544 | opp_overlap 297489 297485, overlap 297484 GCCACCAGAAGAAAG CGCCACGGCGCG CGA TGCGTCGTGGCG TTTTCGTTGCTGCGC Bphy_3360 299032 - 297548 - | RND efflux system outer membrane lipoprotein TERM 263 298682 - 298644 - G 71 -13.7 -2.71447 | opp_overlap 298671 298674, overlap 298641 AGCGACGACAGATCA GGTTCGCGCGTGCGCAG ATACG CCGCGCTCGCGCCGACC TTCGGCAGCTCGTTG TERM 264 298741 - 298715 - G 74 -12.9 -3.28712 | opp_overlap 298715 CTGCTGCTGGGACAA GCCCGCGCGCG CCTGC CGCACGCGCGC CTGCGCGGCACGCAG TERM 265 299015 - 298995 - G 71 -13.9 -2.75535 | overlap 298975 298986 CCAACATGCGAACGA CGGCGGCGC GCG GCGCCGCCC AGATCAAATAGCTTC Bphy_3361 300648 - 299041 - | EmrB/QacA family drug resistance transporter TERM 266 299263 - 299239 - G 100 -13.5 -4.56597 | GTGCCGCGCGAAAAA GCCTGCCGCGC TCT GCGCGACATGC TCCTCGCCGACCAGC TERM 267 300392 - 300359 - G 76 -5.9 -4.46212 | overlap 300360 300373 TTGCCGAGCAGAAAA TTGCGCAGCCCAAAC ACGC GTGTGAGCCACGCAG CGAGCGGAATCATCA Bphy_3362 301789 - 300641 - | secretion protein HlyD family protein TERM 268 302444 - 302411 - g 75 -12.3 -3.55444 | GCGTCAGCTCGGAAA TCGTCGGCCGGCTGC TCGG GCGGCCCGCAGACGA TCCTGAAACGATCAT Bphy_3363 301924 - 302658 + | TetR family transcriptional regulator TERM 269 303845 - 303863 + F 75 -5.8 -4.58283 | overlap 303846 TGGACCGGCTCACCT CGACCGCG CGC CGCGGCCA TTTTTGGAGCGCTTC TERM 270 304095 - 304062 - g 71 -7.3 -4.15044 | gap 1, opp_overlap 304067 304094 CGTCGTTCGAAGAAA CGCCGCCGTCCGCCGA CGA TCTGCTG-CAACGGCG CGCGGCCGTGCTCGC Bphy_3365 303941 - 304507 + | GCN5-related N-acetyltransferase Bphy_3366 305120 - 304566 - | hypothetical protein Bphy_3367 305373 - 306323 + | Urea transporter Bphy_3368 306346 - 307125 + | class II aldolase/adducin family protein Bphy_3369 307201 - 307386 + | 4-oxalocrotonate tautomerase TERM 271 307389 - 307409 + F 89 -6.7 -5.06451 | overlap 307398 307408 GTCTGATGCTTAGTG CCTGCGGCG CGG CGTTGCCGG TTTTTTGACCTGGTG Bphy_3370 307971 - 308936 + | hypothetical protein TERM 272 309007 - 308980 - g 89 -18.6 -2.93585 | opp_overlap 308978 308977 308970, overlap 308977 308998 CTACACCCGAAAGGA GTCGGTGGTCTT TCGA AAGACCACCGAC GAGTTTGGCGGTCTG Bphy_3371 308936 - 309595 + | hypothetical protein Bphy_3372 309684 - 310010 + | hypothetical protein TERM 273 310036 - 310051 + F 100 -7.5 -5.86061 | opp_overlap 310036 GGCTCCAGAACGGAA CCCGC CATCGA GCGGG TTTTTTTTCGTCCGG TERM 274 310503 - 310482 - g 74 -14.5 -2.54459 | overlap 310481 310471 310484 AAGAGCATGAGCAAT TACGCGTCG CCTT CGACGCGTA CCGCCTACAACTTCC Bphy_3373 310206 - 310604 + | hypothetical protein Bphy_3374 310622 - 311032 + | antirestriction protein Bphy_3375 311041 - 311256 + | hypothetical protein Bphy_3376 311265 - 311597 + | hypothetical protein TERM 275 311691 - 311709 + F 100 -8.8 -5.1244 | GCCGGACGAATTTCA GCCCGC AATCTCG GCGGGC TTTTTCTATTGCTGG TERM 276 311754 - 311740 - f 71 -7.8 -3.96624 | overlap 311743 CAGCCGCACGATAAA CACTCG CAG CGAGCG CGCGGATTGCGCCTC TERM 277 311895 - 311911 + F 100 -7.2 -5.86332 | opp_overlap 311894 311895 CTTTGGCAGAAACAG CCCGCT ATCTC GGCGGG TTTTTTTTAGGTTCG Bphy_3377 312012 - 313562 + | phage protein Bphy_3378 314034 - 313855 - | hypothetical protein Bphy_3379 314259 - 314044 - | hypothetical protein Bphy_3380 314300 - 314764 + | hypothetical protein Bphy_3381 315546 - 314761 - | tail collar domain-containing protein TERM 278 314905 - 314923 + g 70 -11.6 -3.4072 | GTTGCCGTGATTGCC CCCGCCCG CGT CGGTCGGG TTCTGGTAGCGGCTC Bphy_3382 318854 - 315543 - | Phage-related protein tail component-like protein TERM 279 318457 - 318488 + g 70 -13.8 -2.52516 | gap 1, opp_overlap 318457 318456, overlap 318456 GTCATCTGCGGAAAG CCGAGCGTTAC-GCG GAT CGCGGTGACGTTCGG ATTGGTGATCGAGCG Bphy_3383 319423 - 318854 - | lambda tail assembly I TERM 280 319349 - 319330 - G 73 -9.2 -3.91798 | CAAGCTGCAAGCAAA GCGCGAGG ATCG CTTCGCGC GGCGAATGCACGTCG Bphy_3384 320155 - 319433 - | NLP/P60 protein Bphy_3385 320850 - 320152 - | phage minor tail protein L Bphy_3386 321251 - 320847 - | minor tail family protein Bphy_3387 323395 - 321248 - | hypothetical protein TERM 281 323484 - 323443 - R 89 -16 -3.43492 | gap 2, opp_overlap 323437 CGACACTGAGGACAA GGGGCT-GCTGTTCG-CGCG CGGG CGCGGCGAACAGGTAGCCCC AGCACATCAGTTCAT Bphy_3388 323916 - 323584 - | hypothetical protein Bphy_3389 324856 - 323924 - | hypothetical protein Bphy_3390 325212 - 324853 - | hypothetical protein TERM 282 325160 - 325176 + g 80 -13.7 -3.35073 | opp_overlap 325160 GCGAGCATTAAAAAA GCCCTGC TGG GCAGGGC TTGATTGAGGATGAT TERM 283 325176 - 325160 - G 100 -13.7 -5.1861 | opp_overlap 325160 GCGAGCATTAAAAAA GCCCTGC TGG GCAGGGC TTGATTGAGGATGAT Bphy_3391 325714 - 325205 - | HK97 family phage protein Bphy_3392 326052 - 325711 - | phage head-tail adaptor Bphy_3393 326630 - 326055 - | phiE125 gp8 hypothetical protein Bphy_3394 327833 - 326640 - | HK97 family phage major capsid protein TERM 284 326957 - 326967 + g 91 -8.2 -4.7373 | AGCCGAACAGATATT CGCC CTG GGCG TTTTTCATCAGCTGG Bphy_3395 328557 - 327847 - | HK97 family phage prohead protease Bphy_3396 329898 - 328561 - | HK97 family phage portal protein Bphy_3397 331659 - 329914 - | terminase TERM 285 331359 - 331340 - GR 72 -9.2 -3.6502 | TACGCCTCACGGAAA CGGCGCGA GCCG TCGCGACG CTTCCAGCCGAACAG Bphy_3398 332095 - 331619 - | P27 family phage terminase small subunit Bphy_3399 333149 - 332079 - | DNA-cytosine methyltransferase Bphy_3400 333757 - 333155 - | nuclease TERM 286 333361 - 333377 + g 73 -12.3 -3.30124 | CGCGATCCCATGTCG CCGTCTC AGC GAGACGG TTATCCGCAATCACG TERM 287 333712 - 333739 + g 78 -15.6 -2.75528 | gap 1, overlap 333710 CGCCCGCAACGTTCT CCGGTTCGGCGCG TGG CGCGC-GAGCCGG TCGTGTCTTGCCGGT Bphy_3401 334924 - 334208 - | hypothetical protein Bphy_3402 335682 - 334921 - | triple helix repeat-containing collagen Bphy_3403 337427 - 335679 - | triple helix repeat-containing collagen Bphy_3404 337795 - 337424 - | hypothetical protein Bphy_3405 338105 - 337782 - | HNH endonuclease TERM 288 338161 - 338123 - R 89 -17.6 -2.82623 | gap 1, opp_overlap 338119 338117, overlap 338128 CGGTCTCCAGAATGA CGAAAGCCCGCGACGGA ACAGGG TCCGT-GCGGGCTTCCG GTACTGCTTGCTTCT TERM 289 338156 - 338128 - R 87 -12.5 -3.86944 | gap 1, opp_overlap 338119 338117, overlap 338123 TCCAGAATGACGAAA GCCCGCGACGGA ACAGGG TCCGT-GCGGGC TTCCGGTACTGCTTG Bphy_3406 338852 - 338244 - | GP66 Bphy_3407 339085 - 338855 - | hypothetical protein Bphy_3408 339300 - 339046 - | hypothetical protein TERM 290 339147 - 339172 + gr 82 -13.3 -3.21099 | gap 1 GGATCGCGATCAGCG CGGCA-CGCGCG ATA CGCGCGATGTCG TTCATCGTCAGCGCG TERM 291 339238 - 339284 + gr 70 -5.9 -4.21933 | gap 2, overlap 339220 339216 339242 CAGCGCTTCGCGCAT GCG-GTCGTT-GTCATGCGCCAG ATG CTGGCGCATCGCGAGCGATTCGG TTGTTTTCCGGTTCA TERM 292 339242 - 339279 + gr 76 -12.1 -3.37556 | gap 1, overlap 339216 339238 GCTTCGCGCATGCGG TCGTT-GTCATGCGCCAG ATG CTGGCGCATCGCGAGCGA TTCGGTTGTTTTCCG Bphy_3409 339802 - 339308 - | endodeoxyribonuclease RusA TERM 293 339601 - 339640 + g 72 -11.4 -3.54424 | TCAGGATCACGCGCA CGGGTCCCGTCATGCGCA CGCG TGCCGATGGCGGGATCTG TTTCAGCGCGTCGCG TERM 294 339725 - 339760 + g 77 -9 -4.2558 | gap 1 GCCATCGGTCTTGCT GCGAACCTTGCGCGCGA CGA TCTCACGCGAG-TTCGC TTTTGATGCGGGCTC Bphy_3410 340266 - 339805 - | DnaB domain-containing protein Bphy_3411 340820 - 340272 - | hypothetical protein Bphy_3412 341724 - 340801 - | hypothetical protein TERM 295 341532 - 341501 - G 70 -8 -4.00124 | overlap 341502 TACTCGACAACGAAA CCACGCGTGACTAA CGCG TCAAGCACGCGTGA AAAATCAAGGTCATC Bphy_3413 341953 - 341738 - | phage transcriptional regulator, AlpA TERM 296 342458 - 342446 - H 83 -7.7 -4.56597 | opp_overlap 342437 CGGCCCCGTTAAAAA GCGTT TGA AACGC ATCAAAGTCGCAACT Bphy_3414 342813 - 343724 + | Phage-related protein endonuclease-like protein Bphy_3415 343717 - 344793 + | hypothetical protein Bphy_3416 344790 - 345248 + | hypothetical protein Bphy_3417 345245 - 345490 + | hypothetical protein TERM 297 345905 - 345865 - g 70 -11.7 -3.35073 | ATTACCGCGAAGGAA GGCGGGACGTGTGCATGCG TGG CGCGTGCGCAGATCCTGCC GAACCCCGACGAAAC Bphy_3418 345493 - 346017 + | hypothetical protein Bphy_3419 346010 - 346180 + | hypothetical protein Bphy_3420 346226 - 346630 + | hypothetical protein TERM 298 346681 - 346647 - f 88 -13.6 -3.68073 | overlap 346649 GATGTCATCGAAGAA CATCAAGCGGCGGGAA AAG TTCTCGCCGCCCGATA TCGGCACGTTGCCCG TERM 299 346679 - 346649 - f 83 -14 -3.41988 | overlap 346647 TGTCATCGAAGAACA TCAAGCGGCGGGAA AAG TTCTCGCCGCCCGA TATCGGCACGTTGCC Bphy_3421 347223 - 347495 + | hypothetical protein TERM 300 348490 - 348476 - g 72 -2.8 -4.64676 | opp_overlap 348489 CCATCGGGAACAAAA CTCATC ACT AACGAG CCGCTTCCGGCAATT Bphy_3422 347505 - 348611 + | hypothetical protein Bphy_3423 348742 - 349866 + | DNA methylase N-4/N-6 domain-containing protein TERM 301 350032 - 349988 - T 90 -18 -2.89921 | opp_overlap 350022 350023 350024, overlap 350025 AGCAAGTCTGATAGA CGGAGGCGCTC-GTCCGACCGC AAT GGGGTCGAACAGAGC-CCTCCG CAGAGATCTGCGAAG TERM 302 350050 - 350025 - T 79 -13.3 -3.06815 | opp_overlap 350024 350023 350022, overlap 349988 ATGGGGTCGAACAGA GCCCTCCGCAG AGAT CTGCGAAGGAC CTCATTCTCTTATGC Bphy_3424 351373 - 350060 - | integrase family protein Bphy_3425 351928 - 351638 - | hypothetical protein Bphy_3426 352427 - 352161 - | hypothetical protein TERM 303 352484 - 352506 + H 71 -12 -2.90688 | CGTGACCCGACTGAC GGCACGCG GCGCGAA CGCGTGCC TGTCTACGATCATTG TERM 304 353107 - 353122 + G 70 -4.6 -4.36914 | overlap 353063 GCGAGCCGACCGTCG TGCACG GCGG CGAGCA TTTTCTCGAGGCCAA TERM 305 353584 - 353594 + G 72 -8.2 -4.07568 | opp_overlap 353579, overlap 353561 GTGCTGAATACGCGG CGCG CCC CGCG TTTTCCGCCGACGCA Bphy_3427 352713 - 354659 + | Fis family GAF modulated sigma54 specific transcriptional regulator TERM 306 354817 - 354785 - g 80 -11.9 -3.75024 | CCGCATGAGCAAGAA GAGCGGACCTACGCA GTA CGCGTCGAGCCGCTC GGCCGCACGTTCGAG Bphy_3428 354716 - 355105 + | ferredoxin Bphy_3429 355306 - 355109 - | hypothetical protein Bphy_3430 356020 - 355376 - | YheO domain-containing protein TERM 307 355964 - 355940 - G 85 -7.8 -4.62069 | gap 1, overlap 355943 CGCGTACGGGAAAAA CAGCGCGG-CG ATGC CGTCCGCGATG GGTGCGTAGCGGGTC Bphy_3431 357076 - 356111 - | ornithine cyclodeaminase/mu-crystallin TERM 308 358015 - 358000 - g 77 -11.8 -3.61398 | CGGCTTCCTGAACAA GCCGGC GGGC GCCGGC TTCGAGATCGTCGGC TERM 309 358158 - 358142 - g 72 -6.5 -4.2528 | opp_overlap 358156 GCCGAACTCAAGAAA GACGGCA CGC TGACGTC GCTCTCGCAGAAATA Bphy_3432 357422 - 358201 + | extracellular solute-binding protein TERM 310 358242 - 358259 + F 73 -12.7 -2.76453 | overlap 358234 358249 CTCCCCTATGGGCGA GCGCGTG GCGA CACGCGC TCGTTGCGCTTCTGG Bphy_3433 358334 - 359578 + | FAD dependent oxidoreductase TERM 311 360248 - 360225 - f 87 -14.6 -3.41051 | overlap 360238 CCAGCCCGACGACAA TGCTCGCGAC ACAC GCCGCGAGCA GCGTCCTGAACCAGC Bphy_3435 360333 - 360467 + | hypothetical protein Bphy_3436 361314 - 360547 - | hypothetical protein Bphy_3437 361560 - 361336 - | hypothetical protein Bphy_3438 361798 - 362373 + | phosphoglycerate mutase Bphy_3439 362784 - 362377 - | hypothetical protein Bphy_3440 362964 - 363182 + | hypothetical protein TERM 312 363501 - 363530 + F 100 -9.4 -4.88067 | gap 1 CCGGGTGACACTCGC TACGTTCGGTGCC CGCGC GGCACC-AGCGTA TTTTTCTCCATCCGT Bphy_3441 363705 - 363989 + | hypothetical protein TERM 313 363995 - 364012 + F 88 -14.1 -3.5489 | opp_overlap 363973, overlap 363992 CGATCTCTGATCGGG CGCGCCG CACC CGGCGCG TTGCTTTACCGTTGT TERM 314 364097 - 364077 - f 76 -12.5 -3.06696 | opp_overlap 364081, overlap 364035 CTGCCGCGCAAGACA TGCTGCGCG CCG CGCGCGGCA CCCTTCCCTCATCGA Bphy_3442 364126 - 364389 + | translation initiation factor IF-1 Bphy_3443 365238 - 364531 - | GntR family transcriptional regulator TERM 315 365393 - 365347 - H 93 -17.7 -3.34401 | opp_overlap 365348 365348 365354, overlap 365339 365354 AAAATAGCAGATCAA GCGAAAATGGTTAACCATTTT CCGTT AATATGGTTAACCATTTTCAC TAGCAAGGTATTGCC TERM 316 365354 - 365386 + H 82 -10.8 -4.18018 | opp_overlap 365339 365347 365354, overlap 365348 365348 CAGATCAAGCGAAAA TGGTTAACCATTTT CCGTT AATATGGTTAACCA TTTTCACTAGCAAGG TERM 317 365386 - 365354 - H 85 -10.8 -4.31085 | opp_overlap 365348 365348 365354, overlap 365339 365347 CAGATCAAGCGAAAA TGGTTAACCATTTT CCGTT AATATGGTTAACCA TTTTCACTAGCAAGG TERM 318 365683 - 365734 + G 90 -15.9 -3.54424 | gap 2, overlap 365677 GTGTGGTCGGCGAAG CGCGAGGCGT-CGC-GCTGGGATTG CTCG CGATCGCAGCCGCGTGCGCCGCGCG TTTCGCCGCGTCGAG TERM 319 366602 - 366626 + G 76 -6.3 -4.46212 | CGCCGTATGTATCGC CGCGATGATCG CGC TGACCTTCGCG TTTTCTCCTCGCAGC Bphy_3444 365409 - 366668 + | major facilitator transporter Bphy_3445 366960 - 367535 + | response regulator receiver/ANTAR domain-containing protein Bphy_3446 367546 - 368688 + | ABC nitrate transporter, periplasmic ligand binding protein TERM 320 368835 - 368795 - T 100 -4.7 -5.71712 | gap 1, opp_overlap 368829 TTGCAGACAAAAAAA CCGGCACCTCAATGCGCA GCAATA TACGCTTTAACG-GCCGG CAAGCCGTCCTTGCC Bphy_3447 369744 - 368803 - | choline ABC transporter, periplasmic binding protein Bphy_3448 370773 - 369796 - | AraC family transcriptional regulator Bphy_3449 371812 - 370907 - | choline ABC transporter, permease protein Bphy_3450 372977 - 371805 - | glycine betaine/L-proline ABC transporter, ATPase subunit TERM 321 372727 - 372750 + g 80 -14.6 -3.14344 | gap 1, opp_overlap 372720 372722 TCGATAATGACCTTG CCGGC-CGTCG GTT CGACGAGCCGG TTGATGAGACGGATC TERM 322 374249 - 374213 - g 76 -9.4 -4.09739 | CGAAGCCTTCGAAAA CG-CGATCCGCACGAACG CTG CGATCG-GCGGTTCGACG AATGCCGTGGTGCAT Bphy_3451 373440 - 375152 + | dihydroxy-acid dehydratase TERM 323 375447 - 375407 - T 100 -17 -3.97331 | opp_overlap 375414 375418, overlap 375412 AACTGATGCAAAGAA CAAAAGAGGAAGGCGCAC GCAAT GTCCGCCTTCCTCCTTCG ACATCAGCGCAGAGC TERM 324 375442 - 375412 - T 100 -15.5 -5.011 | opp_overlap 375414 375418, overlap 375407 ATGCAAAGAACAAAA GAGGAAGGCGCAC GCAAT GTCCGCCTTCCTC CTTCGACATCAGCGC TERM 325 375414 - 375440 + T 73 -13 -2.72344 | opp_overlap 375412 375407, overlap 375418 GCAAAGAACAAAAGA GGAAGGCGCACG CAA TGTCCGCCTTCC TCCTTCGACATCAGC Bphy_3452 375713 - 375468 - | hypothetical protein TERM 326 375593 - 375626 + g 80 -14.5 -3.05384 | gap 1, overlap 375596 GTGCCGGTGCCGGTG CCGGTGCCGGC-GCCG ATG CGGCTGCCGGCGCTGC TTCCGTAGCGGCGGG TERM 327 375596 - 375623 + g 81 -17 -2.75064 | gap 1, overlap 375593 CCGGTGCCGGTGCCG GTGCCGGC-GCCG ATG CGGCTGCCGGCGC TGCTTCCGTAGCGGC Bphy_3453 377194 - 375896 - | TolC family type I secretion outer membrane protein TERM 328 376829 - 376790 - G 73 -12 -3.34894 | gap 1, overlap 376788 376791 AAGTGCTTCGAAATA CGCGCGCACGGCACGCAGC AGC GCGGCCTGCTGCGC-CGCG CCGACGTCGACGCCG Bphy_3454 379307 - 377187 - | ABC transporter related Bphy_3455 380515 - 379313 - | hypothetical protein TERM 329 379672 - 379640 - G 71 -12 -3.18264 | gap 1, opp_overlap 379660 379671, overlap 379641 CCCCGTATGCACGAA GCCGCGCCGGCGC GACGGCAT GCG-CAGCGCGGC GCGCAGCGCGCTTCT Bphy_3456 381542 - 380559 - | hypothetical protein TERM 330 381124 - 381142 + g 71 -10.2 -3.5774 | overlap 381125 381127 ACGATGACGGGAGAT CCAGGCGC ATC GCGCCTGA TTTGCCCGATTGCCT TERM 331 381125 - 381141 + g 71 -13.7 -2.74322 | overlap 381124 381127 CGATGACGGGAGATC CAGGCGC ATC GCGCCTG ATTTGCCCGATTGCC TERM 332 381574 - 381553 - H 100 -17.3 -3.67976 | GGCATGAAGTGCAAA GCCCCACGC CTGC GCGTGGGGC TCATCGGACAACGTT Bphy_3457 381816 - 382061 + | hypothetical protein Bphy_3458 382927 - 382205 - | hypothetical protein Bphy_3459 383200 - 383859 + | two component LuxR family transcriptional regulator TERM 333 383905 - 383847 - T 100 -24 -4.26076 | opp_overlap 383861 383863, overlap 383848 GTATGCGCAGGAAAA TGGCTTGACGTGAAAAGGGCTGCTCGCA GCC CGCGAGCAGCCCTCTTTGCATCAAGCCC GTGGTTGGCGTCAGA TERM 334 383904 - 383848 - T 100 -27.5 -3.15324 | opp_overlap 383861 383863, overlap 383847 TATGCGCAGGAAAAT GGCTTGACGTGAAAAGGGCTGCTCGCA GCC CGCGAGCAGCCCTCTTTGCATCAAGCC CGTGGTTGGCGTCAG TERM 335 383861 - 383891 + T 100 -16.9 -3.64703 | opp_overlap 383848 383847, overlap 383863 ATGGCTTGACGTGAA AAGGGCTGCTCGC AGCCC GCGAGCAGCCCTC TTTGCATCAAGCCCG TERM 336 383863 - 383889 + T 100 -19.5 -3.40597 | opp_overlap 383848 383847, overlap 383861 GGCTTGACGTGAAAA GGGCTGCTCGC AGCCC GCGAGCAGCCC TCTTTGCATCAAGCC Bphy_3460 384926 - 383916 - | rhamnose ABC transporter, periplasmic rhamnose-binding protein TERM 337 384899 - 384917 + g 72 -6.6 -4.329 | opp_overlap 384890, overlap 384902 CGCAAAGCAGCATCG CTCCTGCG TGA CGCAGTGG TTTGTTCATCTCTTG Bphy_3461 386022 - 384994 - | monosaccharide-transporting ATPase TERM 338 385121 - 385156 + g 77 -4.7 -4.65895 | gap 1, overlap 385108 385122 CCCGTGACGATGGTC AGCGTT-TCGCTCGAT ACGTC GTCGAGCGTCAACGCA TTTTTCAATACGCCG Bphy_3462 387076 - 386015 - | monosaccharide-transporting ATPase TERM 339 386984 - 387032 + g 72 -13 -3.08679 | gap 1 GCGGCTCTTTGCGAG CGCGCCGACGAGGC-CGCCCG GCCCGGAG CGGGTGTGCCGCAGCGGCGCG TGTTCGATCGACGCC Bphy_3463 388623 - 387073 - | ABC transporter related Bphy_3464 389565 - 388672 - | amidohydrolase 2 TERM 340 388698 - 388714 + g 75 -2.9 -4.84359 | opp_overlap 388686 388687, overlap 388699 AAAGGCGCTCGGCGT TGCGC ACGAACA GCGCG TTTTTCTCGGCGTCG TERM 341 388924 - 388948 + g 71 -12.1 -3.23711 | GCTGATCTTCACGGC GACGTTCGGGC ACT GCGCGAGCGTC TTCATCCCTTCTCGC TERM 342 389323 - 389351 + g 81 -11.6 -4.15222 | CGCGCGCGAACCCGC CGCGCCGGCTAC CTCTT GCAGCCAGCGCG TTTCTTCGACGGGAT Bphy_3465 389936 - 389610 - | hypothetical protein TERM 343 390344 - 390366 + G 76 -6.3 -4.57837 | gap 2, overlap 390318 CTGGCGTATGCACGG CGCG-C-GCTC GCG GAGCTGACGCG TTTTTCCGAGGATCT Bphy_3466 390098 - 391063 + | LysR family transcriptional regulator TERM 344 391083 - 391112 + T 82 -10.7 -4.12899 | gap 1, overlap 391074 CTTTTATCTGCGACG CCGAGTTTGGCCGC GGC GCGGCCGG-TTCGG TTCTTTGCTTGTGCT TERM 345 391179 - 391203 + T 75 -8.4 -3.96148 | CGTTGCTCTCTCGTG CGGGGCAGCG CGCGT CGCCGCGCCG TTTGTGCTGCGGGCC Bphy_3467 392106 - 391324 - | short-chain dehydrogenase/reductase SDR Bphy_3468 393299 - 392121 - | mandelate racemase/muconate lactonizing protein Bphy_3469 394671 - 393340 - | major facilitator transporter TERM 346 393667 - 393625 - G 72 -13.2 -3.14132 | overlap 393604 CTGCGCCGCGATGAA GCCGCTCGCCGCACAGCACA GCG CGAGCAGCGCGGAGAGCGGG CTGTGCGCGAGACCC TERM 347 394242 - 394228 - G 71 -9.2 -3.81488 | overlap 394230 CGCGCCGAAATAGAA CACGCC GAC GGCGCG CGCACGCGCCGATTG TERM 348 394702 - 394723 + r 72 -6.5 -4.30576 | overlap 394703 CTTGGTGCGAAAGCC GGGTGGCAT GTCT ATGCCGCCA TTTTCATGATCGCGG Bphy_3470 395497 - 394745 - | short-chain dehydrogenase/reductase SDR TERM 349 395605 - 395595 - H 71 -6.8 -4.21607 | TGTACGCAATATAAA TCGG TGA CCGA TACGTGAACAATTCG TERM 350 396075 - 396050 - H 100 -14.7 -5.81412 | CGCAGGCAAAAAAAA GCCCCGGATTC TTGC GAAACCGGGGC GAATCCCATGTCGAG Bphy_3471 396300 - 397019 + | NADPH-dependent FMN reductase TERM 351 397045 - 397076 + F 82 -10.1 -4.19258 | opp_overlap 397045 397046, overlap 397046 CTCTCGTGCTTCAAA TGCCATGCGCTGC TTCGAT GCCGTGCATGGCG TTTTGCGTGCGATAT TERM 352 397530 - 397513 - g 89 -4.7 -5.1101 | overlap 397514 TCACGATCGAAAAAA CGACGCC CGCC AGCGGCG CCCATGCGTACTCGT Bphy_3472 397353 - 397634 + | hypothetical protein Bphy_3473 397774 - 398682 + | hypothetical protein TERM 353 399272 - 399302 + G 77 -14.7 -2.87132 | gap 1 TCGCGGGCGGTTCAT CGGGCGGC-ACGGC CGTG GCCGTCGCCGCGCG TATCTCGCCCGCCGG TERM 354 400032 - 400002 - g 74 -12.7 -3.21199 | CATCGATGAAGTGAA CG-GCTCGTCGATCG TGT CGATCGACG-GCGCG CCCGCCATCGAGGAA Bphy_3474 398791 - 400245 + | amidase TERM 355 400401 - 400372 - g 73 -14.9 -2.52516 | opp_overlap 400371 400367, overlap 400358 400371 TCGTCGACCACCAAT GCGTGCCCGCCGC CCGC GCGTCGGGCAGGC CTGGCTTCTGCACGT Bphy_3475 400254 - 401003 + | CDP-diacylglycerol diphosphatase Bphy_3476 401125 - 402231 + | fatty acid desaturase Bphy_3480 403844 - 404236 + | integrase/recombinase Bphy_3482 407217 - 404887 - | organic solvent tolerance protein TERM 356 405554 - 405566 + g 71 -9.1 -3.72576 | CGTGACGTCAGCGCA GCCGT CAC ACGGC TTTCATCGGACACAC TERM 357 407031 - 407048 + g 74 -10.5 -3.69333 | overlap 407042 TCGTCGCGGCTTTGA CGCCCGG CACA CTGGGCG TTTCGGTCAGTTGTG Bphy_3483 407688 - 407284 - | hypothetical protein Bphy_3484 407884 - 407681 - | hypothetical protein TERM 358 408030 - 408009 - H 71 -12.9 -2.60496 | opp_overlap 408008 408007, overlap 408008 408006 GGCGCCGCTAAACAC GCGCCGCTG CACA CTGCGGCGC CATTCCTTTCACGCC TERM 359 409449 - 409463 + G 83 -2.7 -5.1356 | overlap 409448 409449 GCCGACAGGGGCAAT CACGC TGGGC GCGGG TTTTTCTTCGTCGGA Bphy_3485 408148 - 410457 + | outer membrane protein assembly complex, YaeT protein TERM 360 410509 - 410541 + T 74 -6.8 -4.2558 | overlap 410510 410512 TTTATTGCGGGTGCT TCACGCGTCGCCCC TGTGC GGGGCGGCGCCTAC TTTTAGTCCGCAGTG TERM 361 410512 - 410538 + T 76 -12.9 -3.13504 | overlap 410510 410509 ATTGCGGGTGCTTCA CGCGTCGCCCC TGTGC GGGGCGGCGCC TACTTTTAGTCCGCA Bphy_3486 412184 - 410682 - | RND efflux system outer membrane lipoprotein TERM 362 411349 - 411339 - G 72 -8.2 -4.18762 | overlap 411340 AACCGGCAGCGAAAA CGCC GCG GGCG GCTCGCCGAGCAGCA Bphy_3487 415291 - 412181 - | acriflavin resistance protein TERM 363 414248 - 414236 - G 87 -5.5 -5.02074 | overlap 414247 CCAGTCGCGAAAAAA CGCGT ACG ACACG GCCGTCACCAGCAGC TERM 364 414697 - 414652 - G 71 -11.8 -3.25823 | gap 1, opp_overlap 414695, overlap 414653 CCTTCGGCAGATCAA CGC-TCGCGTTCGCCAGCGCG GTGCG CACGCTGTCGAGCGCGATGCC GTAGCGGCTCAGTTG TERM 365 414696 - 414653 - G 74 -15.3 -2.55351 | gap 1, opp_overlap 414695, overlap 414652 CTTCGGCAGATCAAC GC-TCGCGTTCGCCAGCGCG GTGCG CACGCTGTCGAGCGCGATGC CGTAGCGGCTCAGTT TERM 366 415094 - 415124 + g 75 -12.5 -3.53012 | overlap 415095 TGCTCGTTCAAGCGG CGCCGTCACGGTC TTTGC GACCGTGTCGGAG TTTGCACCCGACAGC Bphy_3488 418439 - 415299 - | acriflavin resistance protein TERM 367 416127 - 416113 - G 78 -10 -4.00445 | GACGACGAAGAAGAA GACGAG GCG CTCGTC GTCCCCACATACAGC Bphy_3489 419610 - 418465 - | RND family efflux transporter MFP subunit TERM 368 419686 - 419663 - R 88 -10.3 -4.4959 | gap 1, overlap 419664 CGGAAGGAATGAAAA GGACGACGCC GCGAG GGCGTCG-CC GGAAATCGGCACTGC TERM 369 419686 - 419664 - R 79 -12.7 -3.29031 | overlap 419663 GGAAGGAATGAAAAG GACGACGCC GCGAG GGCGTCGCC GGAAATCGGCACTGC TERM 370 419728 - 419717 - R 76 -7.2 -4.46212 | overlap 419693 419692 419719 GCCGCCAGGAGAAAA CGGC GAGT GCCG CGCAGGTGAGGGGAA Bphy_3490 421311 - 419800 - | RND efflux system outer membrane lipoprotein Bphy_3491 424481 - 421323 - | hydrophobe/amphiphile efflux-1 (HAE1) family protein TERM 371 424254 - 424283 + g 72 -12.9 -3.06915 | opp_overlap 424250, overlap 424256 GCTCGACGACATGTA CAGCAGATGGTCG AGAC CGCTCATCTGCTG TTCGATCACCTGCGT Bphy_3492 425713 - 424496 - | RND family efflux transporter MFP subunit TERM 372 425377 - 425350 - G 74 -14.8 -2.62396 | opp_overlap 425371 425373 425374 CATGTGCGGAGACCA GCGTCGCCTGCG CCTT CGCAAGCGTCGC CTTCGCGCTGTTCAG TERM 373 425373 - 425420 + g 70 -11.2 -3.32294 | gap 1, opp_overlap 425350, overlap 425371 425374 425416 TGCGCCTTCGCAAGC G-TCGCCTTCGCGCTGTTCAGCG ATG CGATGTACGGCGCGGGGTCGATC TTGTAGAGCGTTTGC TERM 374 425374 - 425418 + g 83 -14.9 -3.22668 | opp_overlap 425350, overlap 425371 425373 425416 GCGCCTTCGCAAGCG TCGCCTTCGCGCTGTTCAGCG ATG CGATGTACGGCGCGGGGTCGA TCTTGTAGAGCGTTT Bphy_3493 425910 - 426545 + | TetR family transcriptional regulator Bphy_3494 426795 - 427565 + | two component transcriptional regulator Bphy_3495 427562 - 428815 + | integral membrane sensor signal transduction histidine kinase Bphy_3496 429155 - 428901 - | hypothetical protein Bphy_3497 430089 - 429319 - | ABC transporter related TERM 375 429487 - 429432 - G 78 -3.9 -4.82901 | opp_overlap 429446 429447, overlap 429447 CGCCGTCCAGAAAAA CGCCGTCATCGCAAATGCCGAACAG ACTCGG CAGTTCGTGGCTCACGATGACGACA GTTGCGCCGAGACCC Bphy_3498 431242 - 430094 - | hypothetical protein TERM 376 430990 - 431002 + g 70 -4.7 -4.386 | CGTCGATTTCGAACG GGCGG GTC CCTCC TTTTCTGACCGATTC Bphy_3499 431728 - 432702 + | hypothetical protein Bphy_3500 432699 - 433337 + | hypothetical protein Bphy_3501 433568 - 434425 + | amino acid transporter-like protein TERM 377 434836 - 434851 + G 70 -2.4 -4.64598 | opp_overlap 434808 434824 434823, overlap 434836 AAGGCGATCACCGAG CGCGTG AATC CGCGAG TTTTTCGGGTCGTTG TERM 378 435365 - 435338 - g 70 -5.6 -4.25283 | gap 1, opp_overlap 435338, overlap 435339 ATCTGCTCAGCAAAA TTCCGTACGAGGC TTT GCCGCGTA-AGAA GGTTTCGTTGCCCAA Bphy_3502 434626 - 435447 + | hypothetical protein Bphy_3503 435639 - 436424 + | TrkA domain-containing protein Bphy_3504 436805 - 438535 + | sulphate transporter Bphy_3505 441815 - 438726 - | acriflavin resistance protein TERM 379 438985 - 439000 + g 71 -10.4 -3.57263 | ACCGCTGTCCAGGTG TCGCGC CCCT GCGCGA TTTCCGCCTGCACCT TERM 380 440470 - 440423 - G 70 -5 -4.43844 | gap 3 CGACGATCCAGAAAA TGCCGCCCGCGTATTCGCC-AGT AGTAG ACTTGGCGAAC-C-CGATCGGCA TGAAGGCAGCGGCTG Bphy_3506 442906 - 441812 - | RND family efflux transporter MFP subunit Bphy_3507 444375 - 442903 - | RND efflux system outer membrane lipoprotein TERM 381 444012 - 444025 + g 79 -6.7 -4.57073 | CTCGCGTATTTGCCG CTTCG GGAA CGAAG TTTTTGAGGACGGTA TERM 382 444372 - 444393 + g 71 -10.1 -3.56273 | opp_overlap 444346 CTGCGCTGCGCCCTG CCACCTCAC CACG GCGAGGTGG TTGTCTCATCGTCCG Bphy_3508 445342 - 445040 - | hypothetical protein Bphy_3509 446112 - 445372 - | OmpW family protein TERM 383 446454 - 446442 - R 73 -3.3 -4.7497 | GTGATGGACGAAAAA CAGCC AGA GGTTG GTCGAAGGCATTGCT Bphy_3510 447569 - 446520 - | 4-hydroxy-2-oxovalerate aldolase Bphy_3511 448528 - 447581 - | acetaldehyde dehydrogenase (acetylating) TERM 384 447691 - 447714 + g 76 -9.7 -4.07568 | opp_overlap 447680, overlap 447682 GATAGTGAGCCGCGC CCTCGATTT CGAGGT AAATCGAGG TTTTGAGGCCGACCA Bphy_3512 449334 - 448525 - | 4-oxalocrotonate decarboxylase Bphy_3513 451123 - 449360 - | monooxygenase FAD-binding Bphy_3514 452130 - 451120 - | glyoxalase/bleomycin resistance protein/dioxygenase Bphy_3515 453036 - 452155 - | alpha/beta hydrolase fold protein TERM 385 453223 - 453194 - g 88 -17.9 -3.10343 | gap 1, opp_overlap 453182, overlap 453182 453180 ACATCGATCATCGAA CCCGCGTCGCGGCG GAG CGCCGCGA-GCGGA TGCGCGCAAGACTTA Bphy_3516 453163 - 453870 + | TetR family transcriptional regulator Bphy_3519 456011 - 455490 - | hypothetical protein Bphy_3520 458373 - 456358 - | alpha amylase catalytic region TERM 386 456715 - 456703 - G 75 -10.5 -3.85698 | opp_overlap 456699 TCGCCCCGTCAGAAA GCGCC GTC GGCGC AGACTTGCGTGACGC TERM 387 456940 - 456906 - G 84 -6.4 -4.82901 | overlap 456909 456920 CCTGGCTCAGAAAAA GTATGGCCATCAGA TTGCGGG CCTGACGGCCACGC AGTTGCACGATTCCC TERM 388 458867 - 458878 + r 75 -5.8 -4.62069 | overlap 458842 GGGTTGCCCCTGATC GCGA GGCT TCGC TTTTTCGGGTGCGAC Bphy_3524 460870 - 460307 - | TetR family transcriptional regulator TERM 389 461128 - 461101 - R 88 -16.3 -3.05816 | GCAGCGCCGACCGAA GCCAGCGGCAG CACCTT CTGCCGCCGGC CCAGGCAGTGGCCTG Bphy_3525 462018 - 461155 - | pyrogallol hydroxytransferase Bphy_3526 465007 - 462029 - | molybdopterin oxidoreductase TERM 390 462709 - 462727 + g 76 -6 -4.56597 | opp_overlap 462698, overlap 462698 ACCAGCGCATATCCA CTGGAGAT CGC ATTTCCGG TTTTTCGGGCGGCAC TERM 391 463650 - 463665 + g 72 -6.8 -4.2704 | overlap 463651 AGGGCCCGAACGTCT TTGGCG GGCA CGCCAG TTTCTTGCTCCTGCC Bphy_3527 466031 - 465117 - | glyoxalase/bleomycin resistance protein/dioxygenase TERM 392 465579 - 465566 - G 76 -5.9 -4.52589 | overlap 465567 GGTCCGGAGAGAAAA CGGCC ACAT GGCCA AACCGCTGAATGTGC Bphy_3528 466848 - 466108 - | OmpW family protein TERM 393 466823 - 466803 - G 77 -11.1 -3.68738 | opp_overlap 466800 CAGCCGAACAGATAA GACCTGCCA TCA CGGCAGGCC GAACATTTTTCCTGT Bphy_3529 467375 - 467124 - | hypothetical protein Bphy_3530 469471 - 467483 - | AMP-dependent synthetase and ligase Bphy_3531 470424 - 469468 - | fumarylacetoacetate (FAA) hydrolase Bphy_3532 471530 - 470460 - | glyoxalase/bleomycin resistance protein/dioxygenase TERM 394 471356 - 471346 - G 74 -2.4 -4.75372 | ACGACGTAGCAAAAA TGCG AGG CGCC TGTACCACGTAGCAG Bphy_3533 471994 - 472707 + | TetR family transcriptional regulator Bphy_3534 473858 - 473097 - | hypothetical protein Bphy_3535 475450 - 473855 - | hypothetical protein Bphy_3536 476857 - 475508 - | PqiA family integral membrane protein TERM 395 476696 - 476672 - G 71 -4.1 -4.52589 | overlap 476673 CTGCGCGATACAAAA GGTGACGAGCG CAG CGAGCGTCACT GCGCAGATCGGGTCA Bphy_3537 478445 - 476982 - | RND efflux system outer membrane lipoprotein TERM 396 477182 - 477231 + g 83 -15 -3.28712 | gap 2, opp_overlap 477217 477219, overlap 477153 477184 TATCGTCGAATGCCG CG-CGCGC-GGCGTCTGCGGCCAC TTCC GTCGAAGCAGACGCCTGCGCGTCG TTATCCAGCGCGGCA TERM 397 477184 - 477228 + g 84 -16.4 -2.82623 | gap 1, opp_overlap 477217 477219, overlap 477153 477182 TCGTCGAATGCCGCG CGCGC-GGCGTCTGCGGCCAC TTCC GTCGAAGCAGACGCCTGCGCG TCGTTATCCAGCGCG TERM 398 477678 - 477734 + g 71 -10.7 -3.64703 | gap 1, opp_overlap 477709, overlap 477681 CAGCGTGTGGATTGC CAGCGCGCG-CTGCTGGCGCAGCGCC GGTAAA GTCGCCGCGATGGCAGCCGCGTCCTG TTTCGATGCGAGCGC Bphy_3538 481621 - 478448 - | acriflavin resistance protein TERM 399 478594 - 478543 - G 75 -4.3 -4.71426 | gap 1, overlap 478544 CTGGCAGGAAGAAAA CCGTCAGCATCGTCGC-GATGG TGATGCCGC CCATCAGCGCCGTCGCCATCGG TCCGAAGAAGCCCGA Bphy_3539 482796 - 481618 - | RND family efflux transporter MFP subunit Bphy_3540 483026 - 483778 + | TetR family transcriptional regulator TERM 400 484308 - 484297 - T 84 -7.2 -4.8667 | TATAGGGGATAAAAA CCGC GAGC GCGG TGAGCAGGCCGATAG Bphy_3544 486849 - 486352 - | MarR family transcriptional regulator TERM 401 486402 - 486415 + g 74 -2.3 -4.8048 | overlap 486403 GAACCGCGGTTCCGC TCAGG TCAT CCTGC TTTTTCATGTCCCGC Bphy_3545 487857 - 487051 - | short-chain dehydrogenase/reductase SDR TERM 402 489215 - 489205 - R 76 -4.6 -4.72986 | overlap 489206 CATCGCCAGGAAAAA GCGC GGC GCAC CCTGCCCGACGTAGG TERM 403 490646 - 490664 + r 93 -5.2 -5.40474 | overlap 490631 490637 490649 ACGCCGGCCGGCAGG TTGGCGGC TTC GTCGCTGA TTTTTTTCCGCGCCT Bphy_3547 492134 - 491019 - | RND family efflux transporter MFP subunit Bphy_3548 492840 - 492217 - | TetR family transcriptional regulator Bphy_3549 492911 - 494371 + | RND efflux system outer membrane lipoprotein Bphy_3550 495207 - 494485 - | short-chain dehydrogenase/reductase SDR Bphy_3551 495919 - 495260 - | metal dependent phosphohydrolase Bphy_3552 496100 - 497509 + | transcriptional regulator TERM 404 497696 - 497653 - g 72 -13 -3.06969 | CAATCCATCGCAAGA GCCGCCTGCACAGCCATGGC CTTC GCCATCGCCGTGCCCGCCGC GGCGCACGGTGCGGC Bphy_3553 497629 - 498072 + | cupin 2 domain-containing protein Bphy_3554 498069 - 498524 + | alkylhydroperoxidase Bphy_3555 499019 - 499792 + | metal dependent phosphohydrolase TERM 405 502014 - 501984 - g 81 -11.1 -4.07868 | gap 1 GCACAGGCACAGAAA CCG-GACGAACCGC GCAC GCGGCTCGGCGCGG CTGCATGAAGACACG Bphy_3557 500832 - 502022 + | glycosyl transferase family protein TERM 406 502875 - 502844 - g 100 -22.4 -4.2349 | overlap 502865 CCGCCAGATGGAAAA CGAGGCGCGCATAG CCAA CTACGCGCGCCTCG CATGACGTCCGGCCC Bphy_3558 502092 - 502880 + | putative ABC phosphate/phosphonate transporter, periplasmic ligand binding protein Bphy_3559 504929 - 502917 - | carbamoyl-phosphate synthase L chain ATP-binding Bphy_3560 505775 - 504990 - | enoyl-CoA hydratase/isomerase Bphy_3561 507407 - 505800 - | propionyl-CoA carboxylase TERM 407 507242 - 507201 - G 73 -9.9 -3.88787 | opp_overlap 507229 507232 CGACAGTTCGAGAAA CGGCGTGCCCGGATCGAGC AGTT GCGCGATGCGGTCGCGCGG CAGCAGCTTGCCACG Bphy_3562 508608 - 507427 - | acyl-CoA dehydrogenase domain-containing protein TERM 408 508653 - 508672 + H 72 -4.9 -4.63218 | overlap 508654 CTTACATCGCGCAAG CGGCCTG TCGCAT CAGGCCA TTTTCTTGAGCCGGG TERM 409 508773 - 508800 + H 79 -7 -4.71061 | overlap 508775 TAAAGCGCATTTCAC TCCAGATTGACG TATG CGTCAATCGGTA TTTTTGAGTGTCACT TERM 410 508775 - 508798 + H 78 -9.6 -3.96999 | overlap 508773 AAGCGCATTTCACTC CAGATTGACG TATG CGTCAATCGG TATTTTTGAGTGTCA Bphy_3563 508908 - 509672 + | TetR family transcriptional regulator TERM 411 509722 - 509705 - f 78 -8.3 -4.42806 | GCAGGTGTAAACAAA CGCGCCC GGCC GGGTGCG CAACTTGCTGACGCA TERM 412 510280 - 510298 + G 71 -10.2 -3.57144 | TGGGCAAGCACTATG TCGCCGTG CCG CTCGGCGA TTTGCAGATCACAGC Bphy_3564 509976 - 510389 + | PRC-barrel domain-containing protein TERM 413 510417 - 510457 + T 76 -11.7 -3.41988 | overlap 510415 510419 GCGCGCCTGGTCTGT GTCACGGCCGCTGCATACG ATG CGTGCAAAGCGGCCGTGTC TGTTCTTCGATCAGC TERM 414 510419 - 510455 + T 79 -12.9 -3.27902 | overlap 510417 510415 GCGCCTGGTCTGTGT CACGGCCGCTGCATACG ATG CGTGCAAAGCGGCCGTG TCTGTTCTTCGATCA TERM 415 510604 - 510582 - T 71 -11.2 -3.21099 | CGGCGCGATCACGAA GCGCCCCGCA ACC CGCGAAGCGC CGGTGCCCGATGCGC Bphy_3565 511233 - 510649 - | hypothetical protein TERM 416 510997 - 510952 - G 76 -14 -3.05384 | opp_overlap 510967 510989, overlap 510954 CGCCGCCGCACCGAA CAGCGC-GCCGACGGCTGCGCC GCCC AGCGTA-CCGACGGCCGCGCTG CCCGCCGCATTGTTC Bphy_3566 511443 - 511976 + | MarR family transcriptional regulator TERM 417 511994 - 512011 + T 71 -10.5 -3.54475 | overlap 511987 512002 512005 GTGCCCCACACCCGC GCCGTCG GGCG CGGCGGC TTATATCGTGGGCGC TERM 418 512024 - 512055 + T 74 -13 -2.88544 | opp_overlap 512049 512051, overlap 512002 512005 GGCTTATATCGTGGG CGCGCTGTTTCCCG GCGG CGCCAAACAGCGCG TATATCGCGCTCGGC TERM 419 512135 - 512108 - T 86 -14.8 -3.18383 | overlap 512117 512118 ACCTGCAGCGACCAA CGGGCGAAACGC CGCC GCGCGTCGCCCG CATATCAACGCAGAC Bphy_3567 513633 - 512140 - | aldehyde dehydrogenase TERM 420 512553 - 512500 - G 74 -11.5 -3.58726 | gap 1, opp_overlap 512511 512517 512521 CGGTTCGATATAGAA GCCGCCGCTTTCCTGCTGCACGCGCG CGC CGC-CGTGCAGCAGCTTCGCTTCGGC GCGCCCTGCTTCGAT TERM 421 512511 - 512542 + g 80 -15.2 -3.17075 | gap 1, opp_overlap 512500, overlap 512517 512521 AGAAGCCGCCGCTTT CCTGCTGCACGCGCG CGC CGC-CGTGCAGCAGC TTCGCTTCGGCGCGC Bphy_3568 514001 - 513657 - | transcriptional regulator Bphy_3569 514384 - 514608 + | hypothetical protein Bphy_3570 514666 - 514911 + | hypothetical protein Bphy_3571 514959 - 515702 + | peptidase C26 Bphy_3572 515735 - 517069 + | glutamate--putrescine ligase Bphy_3573 517129 - 518565 + | aminotransferase class-III TERM 422 519485 - 519525 + G 78 -7.4 -4.38154 | gap 1 GCGGAATTGATGCGC CGCGTGCTGCCGCCCGCCG AGTT CGACGGCTGGTT-CACGCG TTTTCTGCCCGGTCT Bphy_3574 518798 - 519808 + | hypothetical protein Bphy_3575 520171 - 519902 - | hypothetical protein TERM 423 520070 - 520097 + g 71 -7.7 -4.07885 | overlap 520056 CCGCTCGAGCGCGTC GCGCGTAATCG AGCATC CTATTGCGCGC TTTTGCACGACGATG TERM 424 520432 - 520456 + r 78 -9.1 -4.2349 | CCCGCCATTTTCTCG CGCCGTTGCGC CAC GCGCTGCCGCG TTTTCCATCTGAGGA Bphy_3576 521162 - 520626 - | hypothetical protein Bphy_3577 521338 - 521745 + | hypothetical protein TERM 425 521735 - 521751 + F 74 -13.7 -2.50816 | overlap 521734 TCCGCAATGCGCCGC GTCGCGC GTA GCGCGAC CTTGATGCCTGGAAC TERM 426 522479 - 522467 - g 70 -4.7 -4.36914 | GGCCGGCGCAGAAAA GACGC TGC GCGAC GAGATTCTCAAAGGC Bphy_3578 521892 - 522788 + | fructose-bisphosphate aldolase TERM 427 522800 - 522837 + T 87 -16.9 -2.73364 | CTGAGCGGCATGTGC ACGCGAGGCCGCGCGCC ATCG GGTGCGCGGCTTCGCCA TGCTTCGCATCAGCG Bphy_3579 523327 - 522860 - | PRC-barrel domain-containing protein TERM 428 523582 - 523566 - H 85 -10.8 -4.39568 | overlap 523568 ATGGACACATGAAAA CGCGCG ACGGG CGCGCG TCGCAGGAGAACTGG Bphy_3580 523599 - 523787 + | hypothetical protein Bphy_3581 525213 - 523792 - | transcriptional regulator Bphy_3582 526815 - 525283 - | major facilitator transporter TERM 429 526519 - 526501 - G 71 -12.4 -3.2794 | CGCGATGTAGAGCAA CGTCGCGC TAC GCACGACG CTGCATGCGAGCGAG TERM 430 526643 - 526632 - G 72 -3.6 -4.64861 | GCGCGGCAAAACAAA GCAC GTAG GCGC TGATCACCCATTCGA TERM 431 527790 - 527780 - g 74 -2.4 -4.72272 | GCCCGCCACGAAAAA GCTC ATC GCGC AGATCACGGGTGCGC Bphy_3583 526938 - 527816 + | LysR family transcriptional regulator Bphy_3584 528035 - 528295 + | hypothetical protein TERM 432 528506 - 528473 - T 72 -5.3 -4.47328 | gap 1 AACGGCACGAGAAAA GAAAAGAGGCCAGACA GCA CG-CTCGCCCCCTTTC TCCTCGCTCAGGCCG Bphy_3585 529098 - 528523 - | histone family protein nucleoid-structuring protein H-NS TERM 433 529040 - 529060 + g 93 -5.3 -5.37345 | TTTTTCGACACGATG GCTTCTGCC TGG GCCTGAAGC TTTTTTATCCTTGCC TERM 434 529513 - 529544 + r 77 -13.7 -2.9462 | gap 1, opp_overlap 529513, overlap 529510 529515 GACGCACGCAAGAAA GAGCCGGG-GCCGC ACGCG GCAGCACCCGGCTC TCATTTGAATCGGTA TERM 435 529544 - 529513 - R 100 -15.9 -4.2123 | gap 1, opp_overlap 529510 529513 529515 GACGCACGCAAGAAA GAGCCGGG-GCCGC ACGCG GCAGCACCCGGCTC TCATTTGAATCGGTA Bphy_3586 529917 - 529570 - | hypothetical protein TERM 436 529935 - 529902 - G 89 -15.2 -3.75153 | opp_overlap 529924 TCCCTTCAAGGCAAA CGGGGCCGTCGCGC ACTTAG GCGCGACGGCGCGG CGCCGTAGCTTCCGT TERM 437 529924 - 529944 + r 76 -12.5 -3.17075 | opp_overlap 529902 GTCGCGCACTTAGGC GCGACGGCG CGG CGCCGTAGC TTCCGTTAGCACGCC Bphy_3587 530337 - 529972 - | response regulator receiver protein TERM 438 530229 - 530266 + g 74 -10.5 -3.71848 | TCAGCTTCGCCAATC CGTCCTTGCCGTCGACA GCCG TGTCGACATCGAGGCCG TTCTTCCTCAGAAAG Bphy_3588 530969 - 530430 - | hypothetical protein Bphy_3589 531706 - 530966 - | methyl-accepting chemotaxis sensory transducer TERM 439 531193 - 531179 - G 72 -7 -4.21194 | opp_overlap 531189 CGCGACGATCGAAAA GCCGCG CCC CGCCGC ACCTGCGCGTGCGGC Bphy_3590 534113 - 531723 - | putative CheA signal transduction histidine kinase TERM 440 532862 - 532885 + g 75 -11.8 -3.53091 | gap 1, overlap 532877 GGAACTTCTCTTCGT TGA-CGGCGAG AAT CTCGCCGATCA TTTCGAGCCGGCGCT Bphy_3591 535282 - 534347 - | ribonuclease BN TERM 441 534677 - 534664 - G 72 -6.7 -4.30576 | CCGTCAGCACGAAAA TCTCG CCGG CGAGA CCGAACAGATACAGC TERM 442 535912 - 535899 - g 72 -6.7 -4.30576 | opp_overlap 535899 GCCTGATCACGAAAA CGGAT ACCA ATCCG TTCTTCGTGAAGATG Bphy_3592 535745 - 536773 + | monosaccharide-transporting ATPase TERM 443 536802 - 536836 + F 86 -14.2 -3.30124 | opp_overlap 536806 GCAGTAATCGTGCAG CAAACGGAGATGCGCG CGG CGCGCATCTCCGCGAG TTCTCCCGCATGAAG TERM 444 536832 - 536806 - f 100 -22.4 -3.737 | opp_overlap 536802 TAATCGTGCAGCAAA CGGAGATGCGCG CGG CGCGCATCTCCG CGAGTTCTCCCGCAT Bphy_3593 536894 - 537883 + | monosaccharide-transporting ATPase Bphy_3594 537907 - 538707 + | ABC transporter related Bphy_3595 538711 - 539961 + | ROK family protein TERM 445 540081 - 540048 - T 83 -4.5 -5.09225 | gap 1, overlap 540051 540052 ATGCCAGCGAAAAAA CTAT-CGGGACGCAGT GGT ACTGCCACCCGCATCG GTAGACGGATCCAGT Bphy_3596 543107 - 540048 - | glycosyl transferase family protein TERM 446 542757 - 542744 - G 71 -3.7 -4.4959 | opp_overlap 542753, overlap 542745 CGTAAGGAATGAAAA GGCCG TCGT CGGCG AGTGACGCCATGCGT TERM 447 544570 - 544604 + G 72 -12.9 -3.12351 | gap 2, opp_overlap 544525, overlap 544572 TGGCGGCCGCCATCG CG-GGCGAACGC-CCGG TGC CCGAAGCGTTCGCCTCG TTCGGTCTCACGCAC TERM 448 544572 - 544601 + G 71 -14.3 -2.77182 | gap 1, opp_overlap 544525, overlap 544570 GCGGCCGCCATCGCG GGCGAACGC-CCGG TGC CCGAAGCGTTCGCC TCGTTCGGTCTCACG Bphy_3597 543438 - 544715 + | FAD dependent oxidoreductase TERM 449 545306 - 545335 + G 76 -9.3 -4.08394 | opp_overlap 545306 545304 545299 TCACACCATCGAAGA TCTGTTGACGCGA GGAG TCGCGTCAGGGGA TTTTCGCGAGGATAT Bphy_3598 544833 - 545516 + | TetR family transcriptional regulator TERM 450 545592 - 545605 + T 70 -4.5 -4.52781 | gap 1 TCTTTTTTGGGTTTT CGCTGG CAT CC-GCG TTTTGCTTCTGGTTC TERM 451 545621 - 545653 + T 72 -5.4 -4.41348 | overlap 545623 545625 TTTTGCTTCTGGTTC GCTGGTGTTGCCCC TGTGC GGGGCGGCACTCAC TTTCTTTGCGGCGGC Bphy_3599 548602 - 545768 - | diguanylate cyclase/phosphodiesterase with GAF sensor TERM 452 548233 - 548252 + g 71 -7.8 -4.07885 | opp_overlap 548225 548242 CGAGATACGCGATGT CGTACAGC ACGC GCTGCACG TTTTGCGCGCGCATC TERM 453 548719 - 548700 - H 87 -3.6 -5.40072 | gap 1, overlap 548702 548703 TGGCGCGCAAAAAAA TACTTCGGC AAG GCCGAAA-A CGTTTGCCTGAAGGG TERM 454 548718 - 548702 - H 81 -8.7 -4.34482 | overlap 548700 548703 GCGCGCAAAAAAATA CTTCGGC AAG GCCGAAA ACGTTTGCCTGAAGG TERM 455 549345 - 549371 + G 74 -10 -3.72893 | opp_overlap 549310, overlap 549346 549348 GCCGTTTCCGCAGAG CGACCCGGTGCG CGG CGCGCAGGGTCC TTTGCTGGAGAACTG Bphy_3600 548860 - 549402 + | cupin domain-containing protein Bphy_3601 550340 - 549462 - | binding-protein-dependent transport systems inner membrane component Bphy_3602 551176 - 550337 - | ABC transporter related TERM 456 550630 - 550679 + g 72 -12.8 -3.14211 | ACGGTTCGTCCATCA GCAGCACG-CGCGGCTGCATCGCG AGCG CGCGC-GCAATCGCGACGCGCTGC TTCATGCCACCCGAT TERM 457 551417 - 551401 - R 100 -9.4 -5.0925 | opp_overlap 551401 551400 551403 GCCGAAAAGCAAAAA CCCGCT GAAAG AGCGGG CTTTCTGGCGCTTCG Bphy_3603 552497 - 551445 - | nitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein TERM 458 552478 - 552448 - G 79 -3.9 -4.9448 | AGCGATGAAACAAAA CGGCGAGCGA-GCGA CGG CCGCACCGCG-GCCG GGCGAATTGAAAACA Bphy_3604 553457 - 552543 - | taurine dioxygenase TERM 459 553048 - 553058 + g 75 -6.8 -4.40003 | overlap 553044 553050 GCGTGAAGCAGCGAG CCGA GAC TCGG TTTCTCTTTGTACGA Bphy_3605 553786 - 554232 + | hypothetical protein Bphy_3606 554540 - 555691 + | porin TERM 460 555727 - 555754 + F 100 -17 -4.07568 | overlap 555729 CGGGAACTGCGTTCG AAGCCCGCCGCA CTCG TGCGGCGGGCTG TTTTGCGCGCGCAGC TERM 461 555729 - 555752 + F 100 -19.6 -3.63744 | overlap 555727 GGAACTGCGTTCGAA GCCCGCCGCA CTCG TGCGGCGGGC TGTTTTGCGCGCGCA Bphy_3607 555906 - 556205 + | hypothetical protein Bphy_3608 556582 - 556920 + | hypothetical protein Bphy_3609 557758 - 556940 - | hypothetical protein TERM 462 557280 - 557262 - G 72 -11 -3.53224 | overlap 557271 TACTTGCGCGCCAAA GCGACGAA CGC CTCGTCGC AGAAGCTCTTGTGGC TERM 463 557497 - 557515 + g 81 -13.8 -3.53091 | opp_overlap 557469 557488 AGAGCACTCGCCGGT GCGTCGCG AAG CGCGGCGC TTTCAGCGCGAACAT Bphy_3610 558666 - 557878 - | short-chain dehydrogenase/reductase SDR Bphy_3611 558958 - 560070 + | porin Bphy_3612 561396 - 560368 - | 2-dehydropantoate 2-reductase Bphy_3613 562352 - 561555 - | fumarylacetoacetate (FAA) hydrolase Bphy_3614 563681 - 562434 - | formyl-CoA transferase Bphy_3615 564891 - 564529 - | hypothetical protein TERM 464 564879 - 564861 - G 88 -10.2 -4.43307 | overlap 564862 CGGGCAACAAAATAA CCGGCACC TCA GGCGCCGA CGCGCGCCTCAAGTT Bphy_3616 565300 - 564869 - | putative PAS/PAC sensor protein TERM 465 565365 - 565347 - R 90 -11.7 -4.13767 | opp_overlap 565349 CCGCTCAGTTGAAAA CAGCGCC ACGCG GGCGCTG TTCAGCGGGACTGCG Bphy_3617 566673 - 565423 - | formyl-CoA transferase TERM 466 566215 - 566251 + g 75 -7.3 -4.2679 | gap 2, opp_overlap 566214 GCCGTCCCAGAAACC CGTCGTCGACGCTGCGC CGCCA GCGCACTG-CG-CGACG TTTTCATAGACCTTC Bphy_3618 568439 - 566700 - | oxalyl-CoA decarboxylase TERM 467 568158 - 568191 + g 72 -6.5 -4.22652 | gap 1, opp_overlap 568158 GAGGCCGTTCAGGAA GCCCGGCG-CGGACAC CGT GAGACAGATGCCGGGC TTTTGCGTCATGTAG TERM 468 568636 - 568647 + r 74 -2.2 -4.95155 | gap 1, overlap 568634 GGATAGTCCTGGGGT CG-CG CTG CGTCG TTTTTGTCGTGTGAC TERM 469 568693 - 568683 - R 77 -2.4 -5.0538 | CCTCAGTCCAAAAAA TCGC AAT GCGT TTCGACGTATAACGC Bphy_3619 569389 - 568670 - | GntR family transcriptional regulator TERM 470 569976 - 569991 + G 80 -8.2 -4.35524 | overlap 569972 TGACGATGCGGCTCG CGCCGG GCGC CCGGTG TTTTCGATTTCGCAG Bphy_3620 569671 - 570048 + | hypothetical protein TERM 471 570052 - 570084 + T 89 -3.9 -5.54079 | overlap 570058 570067 GCCGGAGCATAAGAT TCCTTGCCTGCGGCG CGG CGTTGCCGGTTTGGA TTTTTTGGTTTTTGG TERM 472 570258 - 570211 - T 73 -3.4 -4.86731 | gap 1, overlap 570225 570227 CGGTGGCAAAGAAAA GTAGGCAAAAG-AAAGCCGCTCA CAC CGAGCGTCGTCACGTTTACCCAC GGGCCCTCCACGTCC TERM 473 570243 - 570225 - T 78 -6.6 -4.6951 | overlap 570211 570227 AGTAGGCAAAAGAAA GCCGCTCA CAC CGAGCGTC GTCACGTTTACCCAC TERM 474 570743 - 570711 - T 76 -4.6 -4.86731 | overlap 570714 CCGCGGCAAAGAAAA GTAGGTGCCGCCCC GCACA GGGGCAACGCCAGC AAACCAGAAGCAAGA TERM 475 570789 - 570779 - T 71 -6.8 -4.20783 | ATGCCAGCGAAGAAA TGCC AAA GGCA AAACCGAAACCGCCA Bphy_3621 572132 - 570813 - | major facilitator transporter TERM 476 572537 - 572506 - R 73 -11.7 -3.13164 | gap 1, overlap 572508 TTGGCAATGAGGGAA GA-CGCGAACATCC GCAAA GGATGTCCGCGATC GATCAACGGCGAATC TERM 477 572534 - 572508 - R 83 -14.5 -3.12595 | overlap 572506 GGCAATGAGGGAAGA CGCGAACATCC GCAAA GGATGTCCGCG ATCGATCAACGGCGA Bphy_3622 573306 - 572587 - | GntR family transcriptional regulator Bphy_3623 574604 - 573873 - | hypothetical protein TERM 478 574741 - 574727 - H 90 -7.1 -5.11112 | AAAGTCGAATAAAAA TGCCG CAAAC CGGCA TACACAAATCAATTC TERM 479 575501 - 575523 + G 73 -6.1 -4.42974 | opp_overlap 575500, overlap 575503 GACACGCTCAACGAT CACGCGCGC CGTCA GCCCGCGAG TTTCTTCTGTCTGCG TERM 480 575970 - 575981 + G 70 -5.8 -4.25104 | TCGTCAATCCGCCCG CGCT GCAG AGCG TTTTGCTGAAGGAAG Bphy_3624 574772 - 576124 + | metallophosphoesterase Bphy_3625 576494 - 576141 - | hypothetical protein TERM 481 576595 - 576610 + H 78 -9 -4.13767 | opp_overlap 576570 GCCAATCGACAGGCT CGCGAA GATT TTCGCG TTTTCGAATGCACCG TERM 482 577625 - 577581 - g 72 -13 -3.05844 | CGTCGCAGGGCAACA TCGTGATCGT-GCCTAACGCCG TCG CGGCGA-AGGCGAAGATCACGA ACAGCAGCCGGCCGC TERM 483 578249 - 578264 + G 74 -2.4 -4.74103 | overlap 578242 578247 GTGACGATTTCGGCG CTGACG GCGT CGACGG TTTTTCAGTTGAACA TERM 484 578400 - 578411 + G 70 -2.2 -4.67755 | CGCCTGTGGCGCAGT CGGA GCAG TCTG TTTTTCAGTGGCTGT Bphy_3626 576995 - 578464 + | cyclic nucleotide-regulated small mechanosensitive ion channel TERM 485 578856 - 578820 - g 82 -7.1 -4.63932 | GACGCTCGAACAAAA CGTCGCGCTGCCGCT GCTGCTG AACGGCCTCGCGCCG CAGCGCGCCCACGAC Bphy_3627 578491 - 579207 + | ABC transporter related TERM 486 580009 - 580036 + G 71 -7.7 -4.08571 | opp_overlap 580003, overlap 580027 CAACATGAACGTGCT CGCGCTCGT CGCGCTGTTC ACGGGCGCG TTTCTCGTGTTCTCG TERM 487 580208 - 580225 + G 71 -4.1 -4.56597 | CTCGGATTTGCGCTC GCGCA TGCCGTAC TGCGC TTTTTCGGCAGCGAC TERM 488 581709 - 581735 + G 71 -10.1 -3.6682 | gap 1, opp_overlap 581711 CGTCGTCGTGCACGA CAGCCGTGGCGG CGGG CCGCCA-GGCCG TTTCCGTCGATGCCG Bphy_3628 579200 - 581776 + | hypothetical protein Bphy_3629 581776 - 582879 + | putative AttH Bphy_3630 583037 - 583348 + | hypothetical protein Bphy_3631 584699 - 583371 - | L-sorbosone dehydrogenase TERM 489 583440 - 583418 - G 83 -17.8 -2.62616 | CGACTCGCCACACGA CGTTGCCGAC ATC GTCGGCAACG AGCAGCGCGCCGCGC TERM 490 583531 - 583551 + g 71 -4.5 -4.56597 | opp_overlap 583513 583512, overlap 583529 GTCAGAAAATCTTCC GGGCCGCCC GCC GGTTCGCCC TTTTTGAACGGCACG TERM 491 585099 - 585137 + r 75 -3.8 -4.86385 | gap 2, opp_overlap 585122, overlap 585101 GCTTCTCACGACCAC GA-CGCTGCC-CGCCGGT GGACA ACCCGCGCGGCGACGATC TTTGTTTTTGCGCAT TERM 492 586012 - 585987 - R 76 -12.5 -3.14132 | GTTCGCGCTCATGAA TCCGTACCGCC CTTC GGCGGCACGGC GCCCGTCTCCCGCGC Bphy_3633 586318 - 585980 - | transposase IS3/IS911 family protein TERM 493 586809 - 586794 - R 73 -11.8 -3.11476 | overlap 586792 586791 ATGCACTCAAAAGGA CCCCGC GAAA GCGGGG CAGGTATCAGCGTTA Bphy_3636 587892 - 586822 - | hypothetical protein TERM 494 587851 - 587836 - G 73 -11.8 -3.37796 | opp_overlap 587830 587829 TTTGAGCAGGTAGAA CGCGCG GTCG CGCGCG TCGTCATCGTTTTTC Bphy_3637 589451 - 587904 - | hypothetical protein TERM 495 589745 - 589730 - R 73 -11.8 -3.08032 | overlap 589727 GGTGTCTCAAAAGGA CCCCGC GAAA GCGGGG CAGGTATCAGCGTTA Bphy_3638 590825 - 589758 - | hypothetical protein TERM 496 590784 - 590769 - G 73 -11.8 -3.37796 | opp_overlap 590763 590762 TTTGAGCAGGTAGAA CGCGCG GTCG CGCGCG TCGTCATCGTTTTTC Bphy_3639 592384 - 590837 - | hypothetical protein Bphy_3640 595206 - 592381 - | type VI secretion system Vgr family protein TERM 497 593890 - 593909 + g 75 -7 -4.37886 | opp_overlap 593888 593889 GGCGTACTCGAAACC CGCCTGGG ATGG CCAGGGCG TTTTGTGCGGCATGC Bphy_3641 595467 - 595216 - | GP29 TERM 498 595610 - 595598 - R 86 -6.3 -4.96848 | opp_overlap 595598 CGCCTTACATAAAAA TCACA CCC TGTGA TATATGGCGCGTCGT TERM 499 595749 - 595763 + r 70 -4.2 -4.58395 | overlap 595738 595743 CGCCCCAACGGCATC CATAGG ATT CCTCTG TTTTTGAGAGATAGC Bphy_3642 596127 - 595804 - | hypothetical protein TERM 500 595965 - 595978 + g 71 -4.5 -4.56597 | overlap 595946 TGCTCACGCGAATGC GTTGC GCAA GCAGC TTTTTCCACACGCGC TERM 501 596165 - 596152 - R 72 -9.5 -3.65902 | opp_overlap 596151 596163 GGCAGGCCACCGAAA CCGGC CATT GCCGG CTATGTCGTTCGATC Bphy_3643 596479 - 596252 - | transposase TERM 502 597020 - 597048 + r 81 -8.8 -4.38154 | GCGTTGTGCGCCCGT CGATGGCCGAGC CGCCC GCGTGGCCATTG TTTTGTGCAACATGT Bphy_3645 599358 - 598003 - | putative TRAP-type uncharacterized transport system, periplasmic component protein TERM 503 598105 - 598084 - G 71 -9.3 -3.68962 | CCGCAACACATAGAA GCCGTCGGC GTAC GCCAGCGGC ATTCGCAGCGTGTCC TERM 504 598443 - 598420 - G 74 -11 -3.59979 | opp_overlap 598438 CTCGCTGATCCGAAA TTCCCGGACC ACGG GGTTCGGGAA CTGCCCCGCTTTCTG TERM 505 599492 - 599472 - R 79 -7.5 -4.63218 | overlap 599484 CTGCCGCTAACAAAA TCGCGCCAA GCA CTTGCGCGA TCGAAAGGGTGTCTT TERM 506 599663 - 599612 - R 100 -19 -3.83844 | opp_overlap 599612 599625, overlap 599625 CCTACCAACGAACAA GCAGCAAAAAAAAGCGGCAAGCAT TTCT ATGCTTGCCGCTTTTTTGTTCTGG GTTTGCGCGCAGTCT TERM 507 599612 - 599663 + r 100 -19 -2.72263 | opp_overlap 599612 599625, overlap 599625 CCTACCAACGAACAA GCAGCAAAAAAAAGCGGCAAGCAT TTCT ATGCTTGCCGCTTTTTTGTTCTGG GTTTGCGCGCAGTCT TERM 508 599625 - 599650 + r 100 -17.7 -5.56673 | opp_overlap 599612 599625, overlap 599612 AAGCAGCAAAAAAAA GCGGCAAGCAT TTCT ATGCTTGCCGC TTTTTTGTTCTGGGT TERM 509 599650 - 599625 - R 100 -17.7 -5.89827 | opp_overlap 599625 599612, overlap 599612 AAGCAGCAAAAAAAA GCGGCAAGCAT TTCT ATGCTTGCCGC TTTTTTGTTCTGGGT TERM 510 599715 - 599740 + r 72 -9 -3.90112 | opp_overlap 599715 CCACCAACGAAAAAA GCCGAAAGAC TTTCTT GTCCTTCGGC TTTCGTTCAACAGAC TERM 511 599740 - 599715 - R 100 -11.2 -5.30155 | opp_overlap 599715 CCACCAACGAAAAAA GCCGAAAGAC TTTCTT GTCCTTCGGC TTTCGTTCAACAGAC Bphy_3646 600142 - 599801 - | cytochrome o ubiquinol oxidase subunit IV Bphy_3647 600756 - 600142 - | cytochrome o ubiquinol oxidase, subunit III TERM 512 600770 - 600819 + r 88 -11.3 -4.21462 | gap 1, overlap 600775 600786 ATCACTCGACCTCCG CGAGCGCCG-GCGCCACGTCCGCG CGT TGCGGAAGCGGCGTGCGGCCTTTG TTTTCGATCGTCCGT TERM 513 600775 - 600814 + r 87 -14.2 -3.40622 | gap 1, overlap 600770 600786 TCGACCTCCGCGAGC GCCG-GCGCCACGTCCGCG CGT TGCGGAAGCGGCGTGCGGC CTTTGTTTTCGATCG Bphy_3648 602768 - 600756 - | cytochrome o ubiquinol oxidase, subunit I TERM 514 600786 - 600815 + g 93 -11.3 -4.6951 | overlap 600775 600770 GAGCGCCGGCGCCAC GTCCGCGCGTTGC GGAA GCGGCGTGCGGCC TTTGTTTTCGATCGT Bphy_3649 603671 - 602772 - | ubiquinol oxidase, subunit II TERM 515 603434 - 603448 + g 88 -8.5 -4.63218 | AGTGTGCCCACTTCG GCGCG TAGAC CGCGC TTTTGTTCGACGCGC TERM 516 603536 - 603548 + g 74 -4.8 -4.56597 | opp_overlap 603498 TCGTCCACGTTGCCG TCGC GATCA GCGA TTTTTCGGCGACGCC TERM 517 603746 - 603729 - R 76 -4.9 -4.74103 | gap 1 TTTGCAAGGCAAAAA GCACA-AG GTC CTATGTGC CAGGCGATTCTATGG TERM 518 603820 - 603798 - R 75 -9.8 -3.8186 | overlap 603799 GACTTCAATCAAGAA CGCCGACGGA AAT TCCGTCGGAA GACGTGCGACGCGTT Bphy_3650 604192 - 603989 - | hypothetical protein Bphy_3651 604609 - 604202 - | hypothetical protein Bphy_3652 604908 - 605408 + | OmpA/MotB domain-containing protein Bphy_3653 605582 - 606109 + | rare lipoprotein A Bphy_3654 607678 - 606479 - | extracellular ligand-binding receptor TERM 519 606708 - 606694 - G 71 -7.8 -4.08706 | overlap 606695 CGGCGATCACATAAA CCGCGT CGT ACGCGA ACGGGGCGTTGAACA TERM 520 607776 - 607764 - H 86 -5.5 -5.1287 | TGTATATCCAAAAAA CGGTA GCA CACCG AGATGCTCATCGCTG Bphy_3655 607950 - 608240 + | putative signal peptide protein TERM 521 608289 - 608256 - T 95 -18.3 -2.53164 | opp_overlap 608256 608262, overlap 608262 GCACGCAGCACCAAC GAAAAACGGGCTAGC AAAA GCTAGCCCGTTTGTC TTTACAGCGCGGGTC TERM 522 608256 - 608289 + T 100 -18.3 -3.53224 | opp_overlap 608256 608262, overlap 608262 GCACGCAGCACCAAC GAAAAACGGGCTAGC AAAA GCTAGCCCGTTTGTC TTTACAGCGCGGGTC TERM 523 608262 - 608283 + T 100 -15.9 -4.32857 | opp_overlap 608256 608262, overlap 608256 AGCACCAACGAAAAA CGGGCTAGC AAAA GCTAGCCCG TTTGTCTTTACAGCG TERM 524 608283 - 608262 - T 100 -15.9 -4.90869 | opp_overlap 608262 608256, overlap 608256 AGCACCAACGAAAAA CGGGCTAGC AAAA GCTAGCCCG TTTGTCTTTACAGCG Bphy_3656 609907 - 608315 - | alkyl hydroperoxide reductase, F subunit TERM 525 610014 - 609982 - R 85 -14.9 -3.14881 | GAACGCGCGCAGTAA GACAGTTCGCAAGGC GCA ACCTTGCGGACTGCC TCACGCGGCGCCGCG TERM 526 610019 - 610043 + r 100 -20 -3.53012 | TGCGGACTGCCTCAC GCGGCGCCGC GCGTG GCGGCGCCGC TTTGGAGACAGCAGG Bphy_3657 610663 - 610100 - | peroxiredoxin TERM 527 611772 - 611788 + G 74 -10.1 -3.71527 | GCATCGAGGCGCTGC GCTCCGC TAC GTGGAGC TTTCCGTCGTTCAGC TERM 528 611913 - 611877 - g 72 -7.1 -4.20783 | overlap 611878 611881 611897 611903 AGCGGATGGAAGAAA TCCAGCGCCGTTTCGAC GAA GACAAACCGGCGCTTGC CCGCTACAACCTGAA TERM 529 612277 - 612300 + G 71 -4.5 -4.56597 | gap 1, overlap 612276 612277 612291 CGACGACGCGGATTC CGTGC-CCGG CTTTC TCGGCGCGCG TTTTTCCCGCGCGCA Bphy_3658 610907 - 613285 + | DNA-directed DNA polymerase Bphy_3659 614366 - 613341 - | 2-alkenal reductase TERM 530 614202 - 614151 - G 100 -21.4 -3.36273 | gap 1 GGGCGTGAAGAGGAA CCCCGAGCCGGTGCCCGCAGGTGCG TGG CGCTCCCGCGCGC-CCGGCACGCGG CGCTCGACGGTGATG Bphy_3660 614689 - 614498 - | hypothetical protein Bphy_3661 615107 - 614916 - | hypothetical protein TERM 531 615328 - 615315 - H 75 -3.7 -4.79949 | overlap 615317 615318 CGGTCAAAAAAAGAA CAGGC GCCC GCCGG GCACGAACAGATTTC Bphy_3662 615445 - 615729 + | hypothetical protein Bphy_3663 616118 - 615792 - | hypothetical protein TERM 532 615919 - 615933 + g 76 -9.2 -4.18018 | opp_overlap 615910 615918 TCAAAGGCGAAGCAG GCGCGG CCC TCGCGC TTTTCGATCGCCGAG Bphy_3664 617664 - 616102 - | sulphate transporter TERM 533 617690 - 617719 + r 89 -15.7 -3.38072 | gap 1 AAGGTCGAGTTGAGC CCTGCCGCCCGGCG ATG CGC-GGGCGGCACG TTGATCTTCAATGAA Bphy_3665 618411 - 617758 - | carbonate dehydratase TERM 534 618778 - 618803 + r 93 -13.3 -3.85209 | opp_overlap 618772 CGGAAGAAGGTGACG GGATGGATCGC ATGC GCGACCCATCC TTCTTGTGAATTACT Bphy_3666 619191 - 618814 - | hypothetical protein TERM 535 619791 - 619769 - g 77 -11.9 -3.64703 | TCGCGCCCACGCAAA CCGGCGCGC GAGCG GCGAGCCGG AGGTGCGCCGCAAGG TERM 536 619989 - 619950 - g 95 -17.2 -3.86346 | gap 1 GGACCTTCGGACAAA TGCGACAAG-GGCGCATGC GCT GCACGCGCCGCGCGTCGCA CGGCAACGGCCGAGC Bphy_3667 619707 - 620282 + | hypothetical protein Bphy_3668 620334 - 620717 + | YbaK/prolyl-tRNA synthetase associated region Bphy_3669 621334 - 620735 - | flavoprotein WrbA TERM 537 621269 - 621284 + g 77 -9 -4.2349 | GCGTGCACCTTCCGC GATGGC CTCC GCCATC TTTTCGATATGCCCG Bphy_3670 621614 - 622189 + | hypothetical protein TERM 538 622211 - 622252 + F 100 -18.9 -2.74263 | gap 1, opp_overlap 622218, overlap 622218 TTCAGAAGCCACATC GAAG-GAAGCGCATCGCGGC ATC GCCGGGATGCGCTTTTCTTC ATTTGGGCGTCGGCT TERM 539 622218 - 622244 + F 100 -18 -4.84642 | opp_overlap 622218, overlap 622211 GCCACATCGAAGGAA GCGCATCGCGGC ATC GCCGGGATGCGC TTTTCTTCATTTGGG TERM 540 622244 - 622218 - f 93 -18 -3.39142 | opp_overlap 622218 622211 GCCACATCGAAGGAA GCGCATCGCGGC ATC GCCGGGATGCGC TTTTCTTCATTTGGG Bphy_3671 622619 - 623083 + | hypothetical protein TERM 541 623118 - 623142 + G 89 -18.6 -3.14132 | CCGCACTGCCATTCT CGCGGCGAGC CTGGC GCTCGCCGCG TTCATGAGCCAGGCC TERM 542 623348 - 623338 - g 81 -3.2 -5.00616 | overlap 623347 CCCGCCGCGAAAAAA CGCA AGG TACG CGCCTCCGTCGACGT Bphy_3672 623080 - 623463 + | hypothetical protein Bphy_3673 623497 - 623991 + | lytic transglycosylase catalytic TERM 543 624005 - 624023 + T 83 -13.8 -3.51976 | opp_overlap 623997, overlap 624002 624020 GAAGACACTGCCCGG CGCGGGCG CCC TGCCCGCG TTCATTTGCGCGATT Bphy_3674 624429 - 624025 - | hypothetical protein TERM 544 624886 - 624912 + H 71 -7.2 -4.13767 | opp_overlap 624903, overlap 624888 624889 ATTTTTTATTCCGCT GGTTCGCCGCTT TAA AAGCGGCGGGTA TTTTCCCGTCCGCAA TERM 545 624888 - 624910 + H 81 -12 -3.6692 | opp_overlap 624903, overlap 624886 624889 TTTTTATTCCGCTGG TTCGCCGCTT TAA AAGCGGCGGG TATTTTCCCGTCCGC TERM 546 624889 - 624909 + H 76 -13.3 -2.79831 | opp_overlap 624903, overlap 624888 624886 TTTTATTCCGCTGGT TCGCCGCTT TAA AAGCGGCGG GTATTTTCCCGTCCG TERM 547 624925 - 624903 - H 75 -8.4 -4.07568 | gap 1, opp_overlap 624889 624888 624886 TTCGCCGCTTTAAAA GCGG-CGGG TATTTT CCCGTCCGC AAATTCCTATTATTG TERM 548 625440 - 625425 - g 70 -6.1 -4.32177 | GGATGCCAGAAGAAA GGCGT CCTGCC ACGCC GCCGAAACCGCCTGA Bphy_3675 625063 - 625455 + | hypothetical protein Bphy_3676 625546 - 626148 + | hypothetical protein Bphy_3677 626199 - 626462 + | hypothetical protein Bphy_3678 627725 - 626469 - | diguanylate cyclase with GAF sensor Bphy_3679 627926 - 627732 - | hypothetical protein Bphy_3680 628291 - 627956 - | hypothetical protein Bphy_3681 629045 - 628323 - | hypothetical protein TERM 549 628702 - 628647 - G 86 -13 -3.86015 | overlap 628631 628689 628690 GATGCCCGTCAGAAA GCCGACAGGCCCGCCGATCGCGGCGA GATG CCACCGCGAAAAGCGGACCGCGCGGC GCGCGAGCCAGCGGC TERM 550 628714 - 628689 - G 72 -8.9 -4.11394 | gap 1, overlap 628647 628690 ATGCCACCGCGAAAA GC-GGACCGCGC GGC GCGCGAGCCAGC GGCGCGCGGGCACCA Bphy_3682 629456 - 629166 - | hypothetical protein Bphy_3683 629458 - 630612 + | acyl-CoA dehydrogenase domain-containing protein TERM 551 630752 - 630729 - f 70 -2.4 -4.84359 | gap 1, opp_overlap 630738, overlap 630745 CGATTGCCAGAAAAA TCATCCC-GTC CTA AACTGGGTTGA TGACGCAACGCAACA TERM 552 631567 - 631613 + G 80 -14.5 -3.05384 | opp_overlap 631565 AGCCCTGGCAAACCT GCCGTAATCGCCAATTGCCAG GCAGG CTGGCAAGTGCTGATGACGGC TTCGATGCGCCCCGA TERM 553 633275 - 633248 - g 100 -11.2 -4.89477 | gap 1, overlap 633249 CGTCGAAGAAGAAAA CGGCGCGCCGCGC GGA GC-CGGCGCGTCA GCAGGTCGAATGACA TERM 554 633274 - 633249 - g 75 -12.5 -3.52963 | gap 1, overlap 633248 GTCGAAGAAGAAAAC GGCGCGCCGCGC GGA GC-CGGCGCGTC AGCAGGTCGAATGAC Bphy_3684 631003 - 633288 + | hypothetical protein TERM 555 633408 - 633394 - g 75 -4.2 -4.63542 | overlap 633384 633396 CACAAGCGCGAAAAA TACGAG CGT CTCGTC GCCTTTGCGGCCACG Bphy_3685 633373 - 634314 + | phosphate butyryltransferase TERM 556 635262 - 635302 + G 85 -11.9 -4.07568 | overlap 635266 CATCTCGCGCGAACT CGGCTCGC-TCGCGGCCGC ACTCG GCGGCCTCGATGCGA-TCG TTTTCACCGCGGGCA TERM 557 635266 - 635299 + G 80 -14.6 -3.08032 | gap 1, overlap 635262 TCGCGCGAACTCGGC TCGC-TCGCGGCCGC ACTCG GCGGCCTCGATGCGA TCGTTTTCACCGCGG Bphy_3686 634333 - 635514 + | acetate kinase Bphy_3687 635517 - 636296 + | short-chain dehydrogenase/reductase SDR Bphy_3688 636302 - 636724 + | hypothetical protein Bphy_3689 636705 - 637016 + | hypothetical protein TERM 558 637074 - 637058 - f 72 -6.5 -4.36914 | opp_overlap 637058 637059, overlap 637059 GGCGGTTGCATAAAA CTGGTGC ACC GCACCAC TTTCCCTGTTATACT TERM 559 637562 - 637513 - g 83 -14.6 -3.29144 | gap 3, overlap 637524 CCACCTTCCCGACAA TTTCACCGAAACG-GCCG-CGATGG AAA CCATCGTCAGCACG-TTCGGCGAAA TGGGCGTCTCCGTAT Bphy_3690 637292 - 639286 + | RNA polymerase, sigma 70 subunit, RpoD TERM 560 639380 - 639344 - T 100 -21 -2.77029 | opp_overlap 639349, overlap 639349 GAAACAGCTTCAAAG CAAAAGCGCGGCAGCC TCAAG GGCTGCCGCGCTTTTT TTTCATTCCTGCGAT TERM 561 639349 - 639375 + T 100 -21.6 -5.96521 | opp_overlap 639349 639344 AGCTTCAAAGCAAAA GCGCGGCAGCCT CAA GGGCTGCCGCGC TTTTTTTTCATTCCT TERM 562 639375 - 639349 - T 100 -20.9 -4.55128 | opp_overlap 639349, overlap 639344 AGCTTCAAAGCAAAA GCGCGGCAGCC TCAAG GGCTGCCGCGC TTTTTTTTCATTCCT Bphy_3691 639861 - 639421 - | hypothetical protein Bphy_3692 640859 - 640008 - | hypothetical protein TERM 563 640285 - 640297 + g 73 -6.3 -4.42386 | CCTGCCGTCGCCAGT TCGAT CGA ATCGA TTTTCTGGATAAAGC TERM 564 641021 - 640998 - R 100 -12.4 -5.75342 | opp_overlap 640998 GCGCGCGAAAAAAAA CGCCAGGCAC ATCT GCACCTGGCG TACTTGACAATCGAC TERM 565 641042 - 641058 + r 82 -10.8 -4.10566 | GACAATCGACTGCAT GGGCGC GCGAA GCGCCC TTGTTCTTATTGGCT Bphy_3693 642560 - 641370 - | hypothetical protein TERM 566 641744 - 641686 - G 74 -4.6 -4.46212 | overlap 641687 CCTTCGAGCAGAAAA CCGTCGTCGACGCC-TTCGACCCGC-AGCG ACA CGCTCGCGCGCCGCACGGCATCGA-G-CGT GAAGTCGCCGTCGAA Bphy_3694 644413 - 642617 - | dihydroxy-acid dehydratase TERM 567 643490 - 643471 - G 70 -13.6 -2.54896 | overlap 643467 CCGGCATGCAATTGA CGAGCAGG GGCA CCTGCTCG CCGACCCGCTGCCAG Bphy_3695 645696 - 644569 - | LacI family transcription regulator TERM 568 645616 - 645634 + g 90 -16 -3.61178 | GGCCGCGAGCGGGCT GCGCGCCT CGG AGGCGCGC TTTGCGGTGCGTGGA TERM 569 645773 - 645793 + r 72 -4.5 -4.65895 | opp_overlap 645742, overlap 645754 CGCGCGGCATCAATC CGCGACACG CAA CGCGCTGCG TTTTTCGATCAGCCC Bphy_3696 646657 - 645767 - | SMP-30/gluconolaconase/LRE domain-containing protein TERM 570 646511 - 646484 - G 72 -8.4 -4.18018 | opp_overlap 646483 CTCCGTCAGGGAAAA GCAGCCGATG TTCTCAGG CATCGGCAGC ATCGTGTCCTGCCCC TERM 571 646954 - 646935 - H 80 -10.6 -4.06904 | GCATCGAATCACAAA CGGGCGCG GCAA CGCGCGCG CTGGAACACAGCATC TERM 572 647017 - 646980 - H 83 -15.5 -2.78816 | opp_overlap 646980 646981 GCATCGGTCAGGACA GCGGCGTCCCCTTCGTG CATG CACGGACGGGACGCCGT TTGCGTTGGCGACCA TERM 573 646981 - 647016 + H 100 -21.2 -3.75153 | opp_overlap 646980, overlap 646980 CATCGGTCAGGACAG CGGCGTCCCCTTCGTG CATG CACGGACGGGACGCCG TTTGCGTTGGCGACC Bphy_3697 647055 - 647819 + | uroporphyrin-III C-methyltransferase TERM 574 647848 - 647830 - T 71 -10.2 -3.54424 | opp_overlap 647843, overlap 647793 CCTGACTCGCTCAAA TGCCGCCG GGA CGGCCGCA CATCAGCTTCAGGAT Bphy_3698 648433 - 647825 - | CBS domain-containing protein TERM 575 648489 - 648537 + H 76 -12.5 -3.11732 | gap 3 TTATTGCGGCGATGC GCGCCCG-CG-GTTCC-CGCTGCG CTGC CGTAGCGCGGAGCACGTCGGCCGC TTACATCGCTTTCCG Bphy_3699 648623 - 649723 + | tRNA 2-selenouridine synthase Bphy_3700 652106 - 649764 - | diguanylate cyclase/phosphodiesterase TERM 576 650867 - 650835 - G 71 -7.5 -4.07568 | overlap 650837 650840 CGGCTTCGGCGAAAA CAGCACGGCGGGCGG CAC CTGCGCGCCGTCCTC GCGCTCGCCGCGCAA TERM 577 650865 - 650837 - G 71 -10.1 -3.63744 | overlap 650835 650840 GCTTCGGCGAAAACA GCACGGCGGGCGG CAC CTGCGCGCCGTCC TCGCGCTCGCCGCGC TERM 578 651452 - 651410 - G 78 -4.1 -4.84359 | overlap 651411 651412 651449 CGATGTCGAGAAAAA TCGCGCTCGTCTTCGCT CCGGGGTCC AGCGACGACAAACGCAG CGCCGCCTGCTCCAG TERM 579 651679 - 651666 - G 91 -9.5 -4.72986 | CAGGCTCAGCAAAAA CGGCG TGCC CGCCG CGTAAAACAGTGCAG Bphy_3701 652965 - 652462 - | GCN5-related N-acetyltransferase Bphy_3702 653353 - 653973 + | hypothetical protein Bphy_3703 654061 - 654414 + | AIG2 family protein Bphy_3704 654520 - 655074 + | hypothetical protein Bphy_3705 655561 - 655103 - | hypothetical protein TERM 580 655758 - 655719 - R 100 -7.8 -5.39721 | gap 1, opp_overlap 655721 655722, overlap 655724 GCACGAGACAAAAAA GGAAAGGCGGCGAAAGACG AAC CGTCCTTCACCGCCCG-CT TTCGGCGCCACACGT TERM 581 655754 - 655724 - R 100 -19.8 -4.49041 | opp_overlap 655722 655721, overlap 655719 AGACAAAAAAGGAAA GGCGGCGAAAGACG AAC CGTCCTTCACCGCC CGCTTTCGGCGCCAC Bphy_3706 657200 - 655779 - | aldehyde dehydrogenase TERM 582 658257 - 658237 - g 72 -9 -4.13945 | gap 1, overlap 658223 658238 AGCGGCAGCCGAAAA CGGCACGCG CGGA CG-GTGCCG CGCGTCGCAAGAAGA Bphy_3707 657303 - 658277 + | LysR family transcriptional regulator TERM 583 658289 - 658279 - f 70 -2.4 -4.78597 | GCAAGAAGAAATAAA CTCG TGT CGCG CTGTCGAATCCGGCC Bphy_3708 658384 - 658821 + | DGPFAETKE family protein Bphy_3709 659994 - 658828 - | hypothetical protein TERM 584 659140 - 659083 - G 70 -7.9 -3.96148 | gap 5, opp_overlap 659088 659089 CGCCTCGACCAGAAA CGCGG---CCAGTACGTT-CGCGCGCT-GG AAG CCGAGCGCGCGCAACGTGCCGATTTCCGCG ACGCGATTGGCGACC TERM 585 659088 - 659132 + g 75 -12.2 -3.53091 | gap 2, opp_overlap 659083, overlap 659089 CGACCAGAAACGCGG CCAGTACGTT-CGCGCGCT-GG AAG CCGAGCGCGCGCAACGTGCCGA TTTCCGCGACGCGAT TERM 586 659089 - 659131 + g 78 -15.7 -2.71712 | gap 2, opp_overlap 659083, overlap 659088 GACCAGAAACGCGGC CAGTACGTT-CGCGCGCT-GG AAG CCGAGCGCGCGCAACGTGCCG ATTTCCGCGACGCGA Bphy_3710 661173 - 660019 - | hypothetical protein TERM 587 660295 - 660277 - G 75 -10.2 -3.88291 | opp_overlap 660283 CAGCAGCGCGAGAAA GCCCGGCC CGA AGCCGAGC GCCTTGAGCGTCGCG Bphy_3711 661902 - 661195 - | ABC transporter related TERM 588 661802 - 661778 - G 73 -9.9 -3.92178 | opp_overlap 661781 ATCAGCGCAATGAAA TCGCCCTCGCG GAT CGCGAGCGTGA TGTCGGACAGCACAG Bphy_3712 663251 - 661899 - | RND family efflux transporter MFP subunit TERM 589 662839 - 662871 + g 81 -13.3 -3.64703 | overlap 662840 ACGCCGAGCCATTCC AGCCGCCCTTGCGCC TTT GACGCAACGGCGGCC TTTCGCTGGGGCACG TERM 590 662840 - 662870 + g 84 -16.8 -2.78679 | overlap 662839 CGCCGAGCCATTCCA GCCGCCCTTGCGCC TTT GACGCAACGGCGGC CTTTCGCTGGGGCAC Bphy_3713 663329 - 664186 + | methyltransferase TERM 591 664864 - 664883 + G 72 -7 -4.21908 | overlap 664865 664867 TCGCATCGAACCTGA TGTCGGCG TTCG CGCCGTCG TTTTCCGTGATGCTG TERM 592 665236 - 665257 + G 70 -7.3 -3.99324 | gap 1, overlap 665236 665249 AGAGCCTGCTGATGG T-CGCGCTGA TCT TCGGCGCGCA TTTCTCGTCGTACAC Bphy_3714 664545 - 665801 + | major facilitator transporter TERM 593 665853 - 665836 - f 78 -14.1 -2.52464 | opp_overlap 665852 TTCCGCCTGAACGCA GCGCGCC GCTC GGCGCGC TCGTGAGCGAACTGT TERM 594 666257 - 666272 + G 72 -3.2 -4.64144 | GCACGTATGTCCGAT GCCG CATTCCGC CGGC TTTTTCCCCATTCTT Bphy_3715 666098 - 666379 + | hypothetical protein TERM 595 666450 - 666402 - f 78 -11.6 -3.72576 | gap 1 TCGTCTTGCATGAAA CGGCGCAGGCGCGCTTACGCCGC TTAC GCCGCTTACGC-CGCTTACGCCG CTTACGCCGCTTACG Bphy_3716 666523 - 668097 + | peptidase S8 and S53 subtilisin kexin sedolisin TERM 596 668156 - 668103 - f 100 -22.3 -2.62616 | opp_overlap 668149 GCAGGTTTGACACGA TCGCGCGAACGCAGCCGGGCGGCAG TGGA CGGCCGCCCGACCGCCTTCGCGTGT GCCTGCGGCGCGCGG Bphy_3717 668219 - 669178 + | NUDIX hydrolase TERM 597 669424 - 669466 + F 72 -8.8 -3.79906 | opp_overlap 669409 669410 669449, overlap 669410 CCCGCCCGATCGACG GGCGCTATGTGCGGCAGCGC ACA GAGCCGCCGCGTCCCGCGCC TTATTCTCCCGATGA Bphy_3718 669576 - 670040 + | hypothetical protein TERM 598 670598 - 670569 - g 84 -12.8 -3.71873 | gap 1 CCAGGCAGATCGAAA CG-GCGGCACGCG GCAAG CGCGAGCCGCTCG TGCATACGGCGGACG Bphy_3719 670037 - 670660 + | OmpA/MotB domain-containing protein TERM 599 672201 - 672173 - g 85 -12.3 -4.08692 | overlap 672161 CAACGCGCCGGAAAA GACGGCGGCCGCG CAA CCCGTCCGCCATC CCGAGTCATGAATCG Bphy_3720 670713 - 672212 + | putative Chase2 sensor protein Bphy_3721 672543 - 672262 - | hypothetical protein TERM 600 672337 - 672356 + g 74 -10 -3.72576 | gap 1 AGTCATTGTTTCGTC GCCGC-CGA CGC TCGCGCGGC TTTCATCGGCCGCAC TERM 601 672606 - 672565 - R 81 -3 -5.18866 | gap 2, opp_overlap 672572, overlap 672568 672569 672570 TCCAAATAAACAAAA GAACGCCTTGACGCGTCGCG CTCT CGCTGCGCGTCAATG--TTC GACATGGGTGGAACG TERM 602 672605 - 672568 - R 70 -3.9 -4.64595 | opp_overlap 672572, overlap 672565 672569 672570 AAATAAACAAAAGAA CGCCTTGACGCGTCGCG CTCT CGCTGCGCGTCAATGTT CGACATGGGTGGAAC TERM 603 672572 - 672601 + r 83 -14.3 -3.04461 | opp_overlap 672570 672569 672568 672565 AAACAAAAGAACGCC TTGACGCGTCGCG CTCT CGCTGCGCGTCAA TGTTCGACATGGGTG TERM 604 672882 - 672844 - R 89 -16.9 -3.07242 | gap 1, overlap 672837 GACAACAAGGAGATA CGCGCGCCAGACAATG GGTCCGAG CATTGTC-GGCGCGCG ACTCGATGTCGGGCG TERM 605 672987 - 672945 - R 100 -24.8 -5.4505 | TCGCCCAACAAAAAA CCGGCCGCGAGACCCGCGCA TTG CGCGCGGACACCGCGGCCGG CTTCAGGTGCCTGCC Bphy_3722 674172 - 673009 - | hypothetical protein TERM 606 674268 - 674282 + r 74 -7.1 -4.26634 | opp_overlap 674267 TTCGCGGAACGAACC CGCGT TGAGC ACGCG TTTTAGCCTTGTTTT Bphy_3723 674649 - 674311 - | hypothetical protein Bphy_3724 676158 - 674782 - | undecaprenyl-phosphate glucose phosphotransferase Bphy_3725 677714 - 676200 - | mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase TERM 607 678536 - 678546 + G 84 -8.2 -4.56597 | overlap 678522 678521 TGCCGATCGCATTTT GCGC ATG GCGC TTTTTCGGAAGAAGC Bphy_3726 678448 - 679764 + | O-antigen polymerase TERM 608 680164 - 680214 + G 72 -11 -3.51934 | overlap 680162 ATGGTCATTCGCACT CGGTCGCCGAAGTGGTGGCGGG TTGGACT CTCGGCACGATCGCGGCGACCG TCTTTCTGCGCACGG TERM 609 680378 - 680401 + G 71 -8 -4.07568 | CCATACACCGGGGAT CGTGCGCGCG CTTT CGCATGCGCG TTTTCGCAACCACGG Bphy_3727 679791 - 680420 + | phosphoesterase, PA-phosphatase related TERM 610 680467 - 680486 + T 78 -2.8 -5.06816 | gap 1, overlap 680468 AGATGCCGCTCGCGT TCGTCG-TC CTT GATCGACGC TTTTTCTTCGACGGT Bphy_3728 681635 - 680442 - | glycosyl transferase group 1 Bphy_3729 683010 - 681694 - | polysaccharide biosynthesis protein TERM 611 682786 - 682770 - G 71 -3.7 -4.5442 | opp_overlap 682770 TGTGCAACGAGAAAA TAGCG TTGTATT CGCTA TTGTTCTGCGCCTTG Bphy_3730 684054 - 683044 - | glycosyl transferase family protein TERM 612 683847 - 683866 + g 83 -9.2 -4.4078 | overlap 683848 CAACGCCCAGGTTGT AGGCGGAC ACCT GTCCGCCG TTTTCCTTGAGGACA TERM 613 683848 - 683865 + g 74 -12.7 -3.24146 | overlap 683847 AACGCCCAGGTTGTA GGCGGAC ACCT GTCCGCC GTTTTCCTTGAGGAC Bphy_3731 685639 - 684152 - | hypothetical protein Bphy_3732 686738 - 685623 - | glycosyl transferase group 1 TERM 614 686587 - 686566 - G 76 -9.4 -4.19817 | opp_overlap 686571 686578 686586 CGCAGCCACGGAAAA CGCCGCTG CCGCTT CAGCGACG CGCCGGGTTCTCTCG Bphy_3733 689142 - 686800 - | exopolysaccharide tyrosine-protein kinase TERM 615 688584 - 688567 - G 70 -7.7 -3.96148 | gap 1 GCCCTTGACCAGAAA CTCG-CCC GAC GGGCCGAG CAGTTCATAGGCGCC Bphy_3734 690084 - 691121 + | AraC family transcriptional regulator Bphy_3735 691143 - 692159 + | hypothetical protein TERM 616 692163 - 692197 + T 100 -30.8 -3.59979 | opp_overlap 692153 GCAGAGGTGTGATGT GCGCAGGCCCGCTCGC GAT GCGGGCGGGCCTGCGC TTTGGAATGCAGCCG Bphy_3736 693781 - 692231 - | hypothetical protein Bphy_3737 695662 - 694616 - | AraC family transcriptional regulator Bphy_3738 697171 - 695762 - | response regulator receiver protein Bphy_3739 699232 - 697445 - | hypothetical protein TERM 617 698399 - 698363 - G 88 -14.3 -3.81951 | opp_overlap 698397 GTTGATACCATGAAA CGAGCCGCGCGTCGCTG CCA CGGCGATACGCGGATCG CTGCACGGCAGCCAT Bphy_3740 699765 - 700820 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Bphy_3741 700896 - 702161 + | hypothetical protein Bphy_3742 702300 - 702578 + | hypothetical protein TERM 618 702600 - 702622 + F 85 -15.6 -3.05596 | opp_overlap 702599 702598 GCGCGTGGCCAAAGC GGTGACGCGT AGC GCGCGTCACC TTCGATCGACACATG TERM 619 703198 - 703216 + G 86 -14.6 -3.4811 | overlap 703196 GGCTGGGTGGCGGAC CGCTTCGG CTC CCGAAGCG TATTCTTCTCCGCGA Bphy_3744 702982 - 704412 + | EmrB/QacA family drug resistance transporter Bphy_3745 704510 - 704758 + | hypothetical protein Bphy_3746 705732 - 705058 - | glyoxalase/bleomycin resistance protein/dioxygenase TERM 620 705325 - 705302 - G 70 -11 -3.38316 | overlap 705308 GGATCATTGAACGAA GCGAAAGAGC CATA GCTCTTACGC TCGGGATGTGGGCCG Bphy_3747 706130 - 705861 - | hypothetical protein Bphy_3748 706497 - 706135 - | hypothetical protein Bphy_3750 707127 - 706771 - | hypothetical protein TERM 621 706977 - 706965 - G 75 -9.1 -3.97947 | overlap 706967 706968 GCCACGGACCATAAA GACGC TGC GCGTC CGCGAGGCCGGGGTA TERM 622 707635 - 707672 + H 84 -15.5 -2.87344 | opp_overlap 707636 ACATCGACCGCACAA ACGCCAAGACCCCGCTT TTGA GGGCGGGGTCATGGCGA TGTATAAGGAGCCTG TERM 623 707671 - 707636 - H 100 -17.6 -3.89822 | opp_overlap 707635 CATCGACCGCACAAA CGCCAAGACCCCGC TTTTGAGG GCGGGGTCATGGCG ATGTATAAGGAGCCT TERM 624 710322 - 710333 + H 71 -7.2 -4.2354 | AGGATCTGTTTCACT CCCC TCCC GGGG TTCTTTTCGCCTTTC TERM 625 713181 - 713167 - g 70 -2.7 -4.59511 | opp_overlap 713167 713167, overlap 713157 AACATTCGCTAAAAA GCTGC TGTTT GCTGC TGCTTTCTTGCGTCT Bphy_3753 713058 - 713420 + | hypothetical protein Bphy_3754 714039 - 713566 - | hypothetical protein Bphy_3755 714424 - 716250 + | phosphoesterase TERM 626 716308 - 716346 + F 90 -11.7 -4.11773 | gap 1, overlap 716311 716312 GCCGGACAATTCGTC GTAGTTCGAGCCAGCACG GCGA CGTGCTGGCTCGG-CGTC TTTTCAGCACTATTT TERM 627 716311 - 716344 + F 84 -13.1 -3.64984 | overlap 716308 716312 GGACAATTCGTCGTA GTTCGAGCCAGCACG GCGA CGTGCTGGCTCGGCG TCTTTTCAGCACTAT TERM 628 716312 - 716343 + F 87 -16.6 -2.78508 | overlap 716311 716308 GACAATTCGTCGTAG TTCGAGCCAGCACG GCGA CGTGCTGGCTCGGC GTCTTTTCAGCACTA Bphy_3756 716377 - 717819 + | di-haem cytochrome c peroxidase Bphy_3757 718908 - 717928 - | lipoic acid synthetase TERM 629 718365 - 718342 - G 70 -11 -3.33492 | CCACGCAGCCGATAA CGCATCGAGC GCAC GATCGATGCG TCCGCGAAAGTCCGG Bphy_3758 720023 - 718911 - | alpha/beta hydrolase fold protein TERM 630 719460 - 719425 - G 80 -15.6 -2.79133 | gap 1 GAATGCCCGACGAGA TGCGCCTGCTCGATGCC GTG AGCATCGAGCAA-CGCA ATCACGCTATCGGCC Bphy_3759 721065 - 720061 - | transketolase central region Bphy_3760 722087 - 721104 - | pyruvate dehydrogenase (acetyl-transferring) Bphy_3761 723258 - 722164 - | ATP-NAD/AcoX kinase TERM 631 722279 - 722312 + g 75 -10.3 -3.85567 | gap 1, overlap 722270 AACGGGCCGCTCCAG TCGAGCGCGAT-TTCG TAG CGGTCGTCGCGCTCGA TTTCGATTTCGCGTT TERM 632 723842 - 723813 - g 70 -14.3 -2.50016 | gap 1, opp_overlap 723812, overlap 723812 723810 TCGTATGAGCAATAC CGGCTCGATC-CCG GTT CGGTGATCGGGCCG CGCGTGCTGACGTCG TERM 633 725318 - 725335 + G 70 -7.7 -3.96148 | gap 1 GCTGGATGGACGGCT CGCG-GAG CGT CTCGCGCG TTTCTCGTGGCCGGG Bphy_3762 723690 - 725639 + | Fis family GAF modulated sigma54 specific transcriptional regulator Bphy_3763 726620 - 725649 - | helix-turn-helix type 11 domain-containing protein Bphy_3764 726712 - 727092 + | antibiotic biosynthesis monooxygenase Bphy_3765 727089 - 728378 + | amino acid permease-associated region TERM 634 728559 - 728583 + F 100 -9.2 -5.11836 | gap 1, opp_overlap 728553, overlap 728560 728564 728565 GCAAAACGATCCCAA GGCCCC-GCCG GAAA CGGAAGGGGCC TTTTGTTTTGGGTGT Bphy_3766 728635 - 729021 + | hypothetical protein TERM 635 729069 - 729089 + T 78 -9.7 -4.04474 | opp_overlap 729069 GCGTGCAATAAAAAA GGCTCATAC ATC GTACGAGCC TTTCTATGCCGCTAT TERM 636 729089 - 729069 - T 100 -11.9 -5.4505 | opp_overlap 729069 GCGTGCAATAAAAAA GGCTCATAC ATC GTACGAGCC TTTCTATGCCGCTAT TERM 637 729106 - 729143 + T 86 -16.3 -2.83271 | opp_overlap 729118, overlap 729103 TTCTATGCCGCTATG TCGCGTGACAAACCGCT CAAC GGCGGTGCGTCACGCGA TGCTTCTGCACGTGG Bphy_3767 730362 - 729160 - | beta-ketoadipyl CoA thiolase TERM 638 731568 - 731530 - g 91 -11.7 -4.58283 | gap 2, overlap 731552 GAACCGTTGCAAAAA GCCGCGCAGTCGGTGTCCA ACA TGGTCG-CG-CTGCGCGGC TAGCAAGAAGCATCA Bphy_3768 730747 - 731571 + | IclR family transcriptional regulator Bphy_3769 732771 - 731581 - | amidohydrolase Bphy_3770 733474 - 732872 - | phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN Bphy_3771 734214 - 733471 - | phosphonate metabolism protein TERM 639 734060 - 734093 + g 91 -16.7 -3.57144 | gap 1 AGCGCTTGCGACAGT GCGGGCGCGTCATGCG GAT CGCGTGTCGCGC-CGC TTTCGGCATCGCGCC Bphy_3772 734969 - 734211 - | GntR family transcriptional regulator Bphy_3773 735166 - 735669 + | phosphonate C-P lyase system protein PhnG TERM 640 735855 - 735805 - g 80 -14.6 -3.06315 | GCAAGATCGGCAAGA TCGGCAACGTGCTGCCCGCTTCGC AAG GCGACGCGCGCAGCAGCTTGCCAC GCGCGCGCGCGGATC Bphy_3774 735669 - 736316 + | phosphonate C-P lyase system protein PhnH TERM 641 736405 - 736378 - g 71 -11.9 -3.28712 | overlap 736379 GCGCCTGCTCGACAA GGCGCGCCGCG GCGACA CGCAGCTCGCC GAGCTGAGCGTCGCG Bphy_3775 736316 - 737431 + | phosphonate metabolism protein Bphy_3776 737428 - 738336 + | phosphonate metabolism PhnJ Bphy_3777 738333 - 739103 + | phosphonate C-P lyase system protein PhnK TERM 642 739573 - 739537 - g 71 -13.8 -2.70932 | opp_overlap 739542, overlap 739546 CGCGGCGTCGAAGGA GCGCAAGCA-CGCGCACG CGC CGC-CGCGCTGCTCGCGC GGCTGAATGTGCCCG Bphy_3778 739117 - 739872 + | phosphonate C-P lyase system protein PhnL TERM 643 739933 - 739911 - g 77 -11.3 -3.72324 | gap 1, opp_overlap 739909 739917 CATGCTGATCAAGAA CG-CCCGCGT CGTC ACGCGGGACG AGGTTTTCAACGGCG Bphy_3779 739897 - 741030 + | phosphonate metabolism protein PhnM TERM 644 741326 - 741307 - f 76 -12.1 -3.37493 | overlap 741318 CGGCCAATAGACCAA GCCCGGC ATAACG GCCGGGC GACGTCGCGCAGCGG Bphy_3780 741388 - 742170 + | cationic amino acid ABC transporter, periplasmic binding protein TERM 645 742221 - 742202 - f 87 -15 -3.25823 | opp_overlap 742202 CGCGCGGTACATGAA CGGGCTCC CTGC GGAGCCCG TTTTGTTTTTCCGGC TERM 646 742202 - 742221 + F 100 -15 -5.26119 | opp_overlap 742202 CGCGCGGTACATGAA CGGGCTCC CTGC GGAGCCCG TTTTGTTTTTCCGGC TERM 647 742948 - 742894 - g 70 -2.2 -4.59773 | gap 2, opp_overlap 742911 742926 742944, overlap 742895 742912 CTCGATGCGCAAAAA CCGCGCACTGAAATCGAATCGCAGCG TCTCG CGCTGCAACT-GCTTTC-GTACGACG CGGACATCGTCCTCG TERM 648 743316 - 743371 + G 100 -21.1 -2.87132 | gap 1, overlap 743318 CCCGCTCGAATTCGC CG-CGACGCCGCTCGCGGGCACCGAG CCGAT CGTGACGCCCGTGAGCGGCGTCGTCG TGTATCGCCACGAAG TERM 649 743318 - 743368 + G 100 -22.5 -2.69151 | overlap 743316 CGCTCGAATTCGCCG CGACGCCGCTCGCGGGCACCGAG CCGAT CGTGACGCCCGTGAGCGGCGTCG TCGTGTATCGCCACG Bphy_3781 742468 - 743583 + | succinylglutamate desuccinylase/aspartoacylase TERM 650 743646 - 743626 - f 95 -14 -4.0075 | opp_overlap 743626 ACCGAATGAAGGAAA TCGCCCGC CGCGT GCGGGCGA TTTTTTTTTCGCTGC TERM 651 743626 - 743646 + F 100 -14 -6.11644 | opp_overlap 743626 ACCGAATGAAGGAAA TCGCCCGC CGCGT GCGGGCGA TTTTTTTTTCGCTGC TERM 652 744580 - 744596 + G 80 -13.7 -3.35996 | ACATTCGTTTCCCGT CGGCTGG CAG CCAGCCG TTCTCCGTGGCGATC Bphy_3782 743904 - 745070 + | porin TERM 653 745144 - 745131 - T 70 -3.7 -4.71382 | opp_overlap 745139 745142, overlap 745132 745133 AGAAGGACTGAAAAA CGCCC TCAC GCGCG GGGCTCGCGCCGCTT Bphy_3783 746136 - 745165 - | pyridoxal-5'-phosphate-dependent protein beta subunit TERM 654 746228 - 746209 - R 82 -10.6 -4.11484 | opp_overlap 746206 746227 TGCAAGGCGTGAAAA GCGGCGCG TAGC CGTGCCGC CAGATTCCTCGCATT Bphy_3784 746571 - 746266 - | hypothetical protein Bphy_3785 747193 - 746561 - | YheO domain-containing protein TERM 655 747170 - 747183 + g 100 -2.3 -5.55664 | overlap 747171 CAGCGACGCCTGCTC CCGCT CCAA AGCGA TTTTTTTCATGGTAG Bphy_3786 747396 - 748142 + | carbonic anhydrase TERM 656 748581 - 748621 + G 75 -12 -3.54459 | gap 3, opp_overlap 748605 748608, overlap 748612 GTTCGCGATGCACTC GGCGCGGCTGCCGCGC-CA AAAAAC TGAGCGCGGCA-C-GCGCC TTTACACCAAATTAA Bphy_3787 748218 - 748607 + | hypothetical protein Bphy_3788 748736 - 749077 + | hypothetical protein Bphy_3789 749247 - 750302 + | hypothetical protein TERM 657 750370 - 750338 - T 100 -24.9 -4.12532 | opp_overlap 750338 GGCCCCAGACAGAAA GCCGCCGCCCGATGC AAC GCATCGCGCGGCGGC TTTTTCGCTTTCAAC TERM 658 750338 - 750370 + T 100 -24.9 -4.81249 | opp_overlap 750338 GGCCCCAGACAGAAA GCCGCCGCCCGATGC AAC GCATCGCGCGGCGGC TTTTTCGCTTTCAAC Bphy_3790 752854 - 750401 - | glycogen/starch/alpha-glucan phosphorylase Bphy_3791 753221 - 753448 + | hypothetical protein TERM 659 754958 - 754938 - g 77 -12.5 -3.63627 | opp_overlap 754949 GGCTGATAGGGCAAA CGACGGGCG CGG CGCTCGTCG CGCTGAGCTTCGGCA TERM 660 755109 - 755087 - g 77 -14.8 -2.87344 | CATCGTGCGCAGACA GCGGTGACCG CGA CGGTCGCCGC CAAAGAGCAATAGAC Bphy_3792 753656 - 755122 + | major facilitator transporter Bphy_3793 756152 - 755148 - | threonine aldolase Bphy_3794 759037 - 756290 - | diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(s) Bphy_3795 759837 - 759034 - | hypothetical protein Bphy_3796 761881 - 760073 - | abortive infection protein TERM 661 760132 - 760143 + g 70 -2.2 -4.63218 | GCAGCATCGGCATCG CGAG CCCT TTCG TTTTCTTCGCGAGCC TERM 662 760418 - 760400 - G 78 -13.2 -3.55761 | overlap 760405 GATGGATTGCGCAAA GGACACGA CGC TCGTGTCC GCGACGTGCGGCGCA TERM 663 761034 - 761049 + g 72 -8.2 -4.09805 | opp_overlap 761033, overlap 761035 ACGTCGAGACGCAAT TGCCGC AGCG GCGGCG TTTCGTTCTTGATGG Bphy_3797 762345 - 761884 - | hypothetical protein TERM 664 762545 - 762505 - R 77 -10.4 -3.92075 | opp_overlap 762544, overlap 762510 762511 ATTCGCAGGCACAAA TACAACGCGCCCACGATC TCGAC GATCGTGGGCGCACAAGA CGCGTTGCTTGTTTC TERM 665 762540 - 762510 - R 100 -19.1 -3.90766 | overlap 762505 762511 CAGGCACAAATACAA CGCGCCCACGATC TCGAC GATCGTGGGCGCA CAAGACGCGTTGCTT TERM 666 762539 - 762511 - R 100 -20.4 -2.93737 | overlap 762510 762505 AGGCACAAATACAAC GCGCCCACGATC TCGAC GATCGTGGGCGC ACAAGACGCGTTGCT Bphy_3798 763936 - 762578 - | major facilitator transporter Bphy_3799 764421 - 764152 - | hypothetical protein TERM 667 764587 - 764610 + H 100 -11 -5.75342 | TCGCACATGTCCTCA GCCCACCG TTGCTAGC CGGTGGGC TTTTTTTTGGCAGGC Bphy_3800 764885 - 766225 + | major facilitator transporter Bphy_3801 766574 - 767593 + | ATPase Bphy_3802 767590 - 768480 + | putative MxaS-like protein Bphy_3803 768477 - 769382 + | hypothetical protein TERM 668 769906 - 769937 + G 71 -13 -3.01924 | CACGCCCGACACGCT GCTCGACCGCGG CATCCAGT CCGCCGTCGAGC TGTTCGACGGCCGTC Bphy_3804 769379 - 770377 + | von Willebrand factor type A TERM 669 770848 - 770817 - g 73 -12.2 -3.33492 | GGACGCACGCTACAA CCTCGAACGCGCGC TACG GCTCGCGCCCGAAG CGCAAGACACCGCCG Bphy_3805 770374 - 770934 + | putative MxaK-like protein Bphy_3806 770943 - 771905 + | putative MxaL-like protein Bphy_3807 771983 - 772306 + | hypothetical protein TERM 670 773743 - 773726 - g 79 -4.1 -4.85599 | gap 1, overlap 773727 773730 CCGAGTTGAGAAAAA CCGA-CGC GAG GCGCTCGA TCGCGCTCGACATGC TERM 671 773825 - 773809 - g 77 -5 -4.59109 | overlap 773810 773811 TACAGCTTGCAAAAA GGGCCG GCCAG CGGCCA ACTGCGCGGGAATCC Bphy_3808 772432 - 774168 + | TPR repeat-containing protein TERM 672 774184 - 774171 - f 75 -5.9 -4.63218 | CTGCCGCCAATAAAA CGGAC GCTT GCCCG CCTCTCGAGACAAAC TERM 673 774302 - 774316 + F 70 -2.1 -4.76041 | gap 1, opp_overlap 774273, overlap 774295 774294 CACGCATTGCCGGTT TC-GGC GCCG GCCTGA TTTTTCGTCGATCTA TERM 674 775343 - 775333 - g 100 -8.2 -5.36441 | overlap 775334 CCTGCAGACAAAAAA GCGC ATT GCGC GCTGGGACCTCTCGC Bphy_3809 774371 - 775528 + | amine dehydrogenase TERM 675 775728 - 775714 - g 78 -12.8 -3.53012 | opp_overlap 775699 775696 TCGCGGCGGCGGAAA CGGCGG GCG CCGCCG CGCTGCTGTTCGCCG Bphy_3810 775536 - 776102 + | hypothetical protein Bphy_3811 776099 - 776725 + | methylamine dehydrogenase accessory protein MauD Bphy_3812 776767 - 777312 + | amine dehydrogenase TERM 676 777364 - 777333 - g 71 -7.8 -4.20074 | gap 1, opp_overlap 777335, overlap 777334 AAACACACTGGAAAA TTCGCGGCCGTCTGC ATG GCGG-CGGCCGCGTC GTTCGCGATGACGGA TERM 677 777335 - 777362 + G 81 -17 -2.72344 | gap 1, opp_overlap 777334 777333 ACACACTGGAAAATT CGCGGCCGTCTGC ATG GCGG-CGGCCGCG TCGTTCGCGATGACG Bphy_3813 777309 - 777806 + | cytochrome c class I TERM 678 777873 - 777853 - g 93 -19.7 -3.02511 | opp_overlap 777854 777855 777856, overlap 777808 CGGACTCGCGCAACA GCCCGCGCG CGG CGCGCGGGC TGCCACGCCGTGGAT Bphy_3814 777803 - 778354 + | cytochrome c class I TERM 679 779512 - 779527 + G 78 -3.9 -4.72272 | AGCGGGCGGCAAGAT GCTCG ACAAGG CGGGC TTTTTCGTCGAGCCA Bphy_3815 778379 - 779884 + | aldehyde dehydrogenase TERM 680 780615 - 780598 - g 76 -9.1 -4.08216 | gap 1 TGACTTCGCGCAAAA GCG-CGGC TGG GCCGTCGC GGCGAGTTACAGCAA Bphy_3816 779993 - 781222 + | porin TERM 681 781245 - 781279 + T 86 -12 -3.9777 | overlap 781247 CACGGCGCGTGCAAT TCGCGCGTCTCGGGCC AGA GGCGTGAGACGCGCTC TTTGTCGATGTTGAA TERM 682 781247 - 781277 + T 100 -19 -3.57639 | overlap 781245 CGGCGCGTGCAATTC GCGCGTCTCGGGCC AGA GGCGTGAGACGCGC TCTTTGTCGATGTTG Bphy_3817 781605 - 781303 - | hypothetical protein Bphy_3818 782598 - 781681 - | diguanylate phosphodiesterase TERM 683 782885 - 782848 - g 81 -9.8 -4.26903 | gap 1 GGGACCTTATGAAAA CGCATCAGCTCCGCGCG CTGGT CGC-CGTAGCGGACGCG GGCAGCGTGCGCGGT Bphy_3819 782841 - 783791 + | LysR family transcriptional regulator Bphy_3820 784879 - 783788 - | 2-aminoethylphosphonate aminotransferase Bphy_3821 786063 - 784879 - | phosphonopyruvate decarboxylase TERM 684 786042 - 786013 - G 77 -15.7 -2.62396 | overlap 785989 CACGCCCGCATACCA GTCGAAGCCGCGC TCGC GCGCCGCCTCGAC GAACTGTGCTGCCTC Bphy_3822 787766 - 786060 - | phosphoenolpyruvate phosphomutase Bphy_3823 788850 - 790391 + | methyl-accepting chemotaxis sensory transducer TERM 685 790474 - 790450 - f 100 -12.2 -5.15634 | gap 1, overlap 790453 TATCCCACCAAAAAA GAAGGCGCTCG ATTG CGAGCGCCT-C ATCAACACGCCGCGT TERM 686 790472 - 790453 - f 100 -15 -4.67552 | overlap 790450 CCCACCAAAAAAGAA GGCGCTCG ATTG CGAGCGCC TCATCAACACGCCGC TERM 687 790613 - 790593 - f 75 -5.3 -4.59773 | opp_overlap 790599, overlap 790594 GCGCACGCGCAAAAA CCTGCGCGA AGC TCGCACCGA GATTACGTTCTTATT TERM 688 791384 - 791355 - g 72 -8.6 -4.07885 | gap 1 CACGCCCGCGCAAAA CGGCGCGACCGTC CATCT GACGATCG-ACCG GCGCATCCAGCAGCT Bphy_3824 790684 - 792420 + | peptidoglycan glycosyltransferase Bphy_3825 794148 - 792469 - | TPR repeat-containing protein Bphy_3826 794514 - 796247 + | putative hemagglutinin-related transmembrane protein Bphy_3827 796287 - 796598 + | hypothetical protein Bphy_3828 796828 - 797079 + | hypothetical protein Bphy_3829 797394 - 797152 - | hypothetical protein TERM 689 797342 - 797321 - G 73 -13.7 -2.81471 | gap 1, opp_overlap 797312 797311, overlap 797311 CAGAAGCGCACGACA CG-CGCCGGC ATT GCCGGCGTCG GTGCGAGCCATTTAT Bphy_3830 798003 - 797473 - | hypothetical protein TERM 690 798288 - 798314 + H 77 -13.6 -2.95942 | overlap 798290 798291 GCCAACGTGTTGCGT CTCGCGCGCGCG ACG CGTGTGCGCGCG TGCTTTCGCTATCGC TERM 691 798290 - 798316 + H 70 -12.3 -2.82327 | gap 1, overlap 798288 798291 CAACGTGTTGCGTCT CGCGCGCGCGAC GCGT GT-GCGCGCGTG CTTTCGCTATCGCCC TERM 692 798291 - 798317 + H 81 -12.3 -3.70902 | gap 1, overlap 798288 798290 AACGTGTTGCGTCTC GCGCGCGCG-AC GCGT GTGCGCGCGTGC TTTCGCTATCGCCCG Bphy_3831 798458 - 798742 + | hypothetical protein Bphy_3832 798748 - 799518 + | protein serine/threonine phosphatase Bphy_3833 800895 - 799543 - | putative sigma54 specific transcriptional regulator TERM 693 799710 - 799741 + g 81 -8 -4.56607 | gap 1, overlap 799711 799731 CCGCGACCGTCCCGC CGACTTCCTGCAAGC CGC GCT-GCAGGAAGGCC TTTTCTGCTTCGTCG TERM 694 799711 - 799740 + g 70 -11.5 -3.33241 | gap 1, overlap 799710 799731 CGCGACCGTCCCGCC GACTTCCTGCAAGC CGC GCT-GCAGGAAGGC CTTTTCTGCTTCGTC TERM 695 799745 - 799792 + g 74 -12.9 -3.2048 | gap 3, overlap 799731 799746 TGCAGGAAGGCCTTT TCTGCTTCGTCGCT-GGCGGCGCG CTT CGCGTCGCTGAGCGAC--AGCAGG TTCCTCACATTTGCG TERM 696 799746 - 799791 + g 70 -14.2 -2.51966 | gap 3, overlap 799731 799745 GCAGGAAGGCCTTTT CTGCTTCGTCGCT-GGCGGCGCG CTT CGCGTCGCTGAGCGAC--AGCAG GTTCCTCACATTTGC TERM 697 800674 - 800620 - G 84 -15 -3.36273 | gap 2, overlap 800616 GCCCTCGAAGATGAA GCTGCGCG-CGAGCAG-CGCCTGGCG TCGCG CGCCGCGCGACTGGTCGCCGCGCAAC GGCTCGACGACGGCC Bphy_3834 803948 - 800892 - | cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter Bphy_3835 804735 - 803983 - | PpiC-type peptidyl-prolyl cis-trans isomerase TERM 698 804582 - 804598 + g 71 -4.3 -4.57569 | overlap 804583 GGATTTCGTCGGCGC TCACGGT CAC GCCGTGC TTTTTGGCGGCGTGC Bphy_3836 806206 - 804833 - | secretion protein HlyD family protein TERM 699 805625 - 805651 + g 70 -13.7 -2.60941 | overlap 805636 805648 CTTGTCCGCTTCCTG GCGCGCCGC ATCGCGTGC GCGGCGCGC GTTGTCCAGTGTACT TERM 700 805636 - 805652 + g 70 -11.5 -3.35438 | overlap 805625 805648 CCTGGCGCGCCGCAT CGCGTGC GCG GCGCGCG TTGTCCAGTGTACTG Bphy_3837 808754 - 806193 - | FHA domain-containing protein TERM 701 808448 - 808503 + g 84 -12.8 -3.7732 | gap 4, opp_overlap 808439 808437, overlap 808475 AGCACAGCTCGTCGC CGGCGCGCACGCG-CGACGGCGTCTGCC GCAC GGCA-ATGCCGTTGACG-GT-CGTGCCG TTCTTGCTGTCGAGA Bphy_3838 810513 - 809002 - | RND efflux system outer membrane lipoprotein TERM 702 809820 - 809840 + g 70 -2.6 -4.66537 | gap 1 CATAGATCGACAGAA TGGTGCGGT TCTC ATCG-ACCA TTTTCTGTTGCGCGA TERM 703 810241 - 810283 + g 74 -13.3 -3.28791 | opp_overlap 810273, overlap 810243 GAAGCCTTTCCACCA GTCGGGCACGATGGTGTCG GCGGG CGACACGAGCGAGCCCGTC TTGTCGGACCACGCT TERM 704 810243 - 810281 + g 83 -14.5 -3.21276 | opp_overlap 810273, overlap 810241 AGCCTTTCCACCAGT CGGGCACGATGGTGTCG GCGGG CGACACGAGCGAGCCCG TCTTGTCGGACCACG TERM 705 810753 - 810722 - R 79 -13.7 -3.14931 | opp_overlap 810702 810744 CGTAGTCTTCAGGAA GCCCGCGGAGGCT GGTCTG AACCTCCGCGGGT AACGCCGGGTGCTTA Bphy_3839 811035 - 810766 - | hypothetical protein Bphy_3840 811781 - 811353 - | hypothetical protein Bphy_3841 812269 - 811844 - | hypothetical protein Bphy_3842 812598 - 814448 + | hypothetical protein TERM 706 814476 - 814503 + T 79 -12.7 -3.24188 | opp_overlap 814465 814466, overlap 814465 AGAAGCCCGGGCACC GGCGCGCGC TTCTCAGTGC GCGCGCGCC TTGCTCGTGATCTGC Bphy_3843 816614 - 814488 - | serine/threonine protein kinase TERM 707 816727 - 816757 + H 83 -14.1 -3.14344 | gap 1, opp_overlap 816719 CAAACCAGGATTGGC CCGCGACACA-GGC GGAC GTCATGTGTCGCGG TTCATCCAACAGCTC TERM 708 816853 - 816884 + H 70 -3.7 -4.59109 | gap 1, opp_overlap 816829 816828, overlap 816854 GAACCGACCTCCTTC GTGCG-AAGCCTCG TGCAT CAAGGCTTACGCAG TTTTTCGCCAGTCTG Bphy_3844 817010 - 817279 + | hypothetical protein Bphy_3845 817371 - 817655 + | hypothetical protein Bphy_3846 817833 - 818057 + | hypothetical protein TERM 709 818077 - 818110 + F 81 -12.4 -3.74077 | GTTCTCTGTTTTCTT CACATGCCGCTTGC CTGATC GCTAGCGGCATGCG TTTGCATGTCTACGC Bphy_3847 818294 - 818599 + | hypothetical protein TERM 710 818611 - 818668 + F 85 -10.4 -4.3953 | gap 1, overlap 818607 818612 818614 CTGAGCGGCGCGGCG C-GTGAGGGCCTCTCTGTGAGGGCCTC TCTGT GAGGGCCTCTCTGTGAGGGCCTCTCTG TTTGTTGTGGTTGGA TERM 711 818612 - 818666 + F 100 -14.1 -3.79611 | overlap 818607 818611 818614 TGAGCGGCGCGGCGC GTGAGGGCCTCTCTGTGAGGGCCTC TCTGT GAGGGCCTCTCTGTGAGGGCCTCTC TGTTTGTTGTGGTTG TERM 712 818614 - 818664 + F 87 -15.3 -3.46387 | overlap 818607 818612 818611 AGCGGCGCGGCGCGT GAGGGCCTCTCTGTGAGGGCCTC TCTGT GAGGGCCTCTCTGTGAGGGCCTC TCTGTTTGTTGTGGT TERM 713 819354 - 819342 - g 71 -9.1 -3.70902 | CGCTGGAGATCGAAA TCGGC TAT GCCGA CGAAGCTCGCGTGCG Bphy_3848 818654 - 819526 + | hypothetical protein TERM 714 819584 - 819550 - T 71 -7.9 -3.97356 | AAAGCAAAACGCAAA CGGC-CGCACGCCAGAA AGG TACTG-CGTGCACGCCG CCGTCATCAGCCATC Bphy_3849 819887 - 819645 - | hypothetical protein TERM 715 819892 - 819920 + r 78 -8.1 -4.46112 | opp_overlap 819894 819895, overlap 819895 CGCCGCGCCAAATAA AAGGGTCCGGC AGAACTG GCCGGACCTTG TTTGTTTCAGTGCCG TERM 716 819918 - 819894 - R 93 -8.5 -4.86731 | opp_overlap 819892 819895, overlap 819895 CCGCGCCAAATAAAA GGGTCCGGC AGAACTG GCCGGACCT TGTTTGTTTCAGTGC TERM 717 819895 - 819917 + r 93 -12 -4.34285 | opp_overlap 819895 819894, overlap 819892 CGCGCCAAATAAAAG GGTCCGGC AGAACTG GCCGGACC TTGTTTGTTTCAGTG TERM 718 819917 - 819895 - R 77 -12 -3.51557 | opp_overlap 819892 819895, overlap 819894 CGCGCCAAATAAAAG GGTCCGGC AGAACTG GCCGGACC TTGTTTGTTTCAGTG Bphy_3850 820666 - 819947 - | histone family protein nucleoid-structuring protein H-NS TERM 719 820098 - 820124 + g 72 -3.6 -4.66609 | gap 1, overlap 820100 820104 ACACGCTTGCCAAGC GTCGGC-GCGG CAGATT TCGCAGCCGCC TTTTTAACTGCCGTC TERM 720 820255 - 820269 + g 81 -3.5 -5.09762 | overlap 820256 CTGCCTTCTTAGCGG TGGCT TTCTT AGCCG TTTTCTTTGTTGCAG TERM 721 820373 - 820404 + g 72 -13.1 -3.05963 | gap 1 CTTGATCCATGCCGG CGGGCG-AGCATGG CCACT CCATGTTGCGCCCG TCTTCGGATCGCGGT Bphy_3851 821017 - 823032 + | phosphoesterase PA-phosphatase related TERM 722 823026 - 823042 + F 72 -6.6 -4.29845 | opp_overlap 823025 ATTCGGATCGAAAGC GCGATA GGCCG TATCGC TTTTGACTTCCGTTA TERM 723 823426 - 823448 + G 71 -12.6 -3.27109 | opp_overlap 823393 823426 823425, overlap 823425 GGCGTCCGTCGAAAC GCGCATGCGC AAG GCGCGCGCGC TGTTCGTTCGGTTCG TERM 724 823530 - 823553 + G 70 -2.3 -4.65916 | overlap 823531 CCCCGCCGTTGATGG GCACGACGC GCGTCG GCATCGTGA TTTTCTTCGCGTGGG TERM 725 824138 - 824124 - g 81 -3.4 -5.02074 | CGATGCGTGAAAAAA GCCGCA CGT CGCCGC AGCAGCCGGGCATCA Bphy_3852 823145 - 824200 + | rhodanese domain-containing protein Bphy_3853 825310 - 824231 - | diguanylate cyclase TERM 726 827101 - 827088 - g 70 -2.3 -4.65895 | overlap 827096 CGTCTGATGGAAAAA GCGAA ACAG CCCGC GTTTGCAGCGGACGA Bphy_3854 825936 - 827525 + | phosphate transporter TERM 727 827545 - 827562 + T 100 -14.1 -4.0825 | opp_overlap 827545 GTCCAACGAAAAAAA GCGCGGC AGTT GCCGCGC TTCTTTCATTCAACC TERM 728 827562 - 827545 - T 100 -14.1 -5.63103 | opp_overlap 827545 GTCCAACGAAAAAAA GCGCGGC AGTT GCCGCGC TTCTTTCATTCAACC Bphy_3855 828526 - 827600 - | hypothetical protein Bphy_3856 829040 - 828654 - | glyoxalase/bleomycin resistance protein/dioxygenase TERM 729 829100 - 829069 - R 100 -21.6 -4.74504 | ATCCGAACGTAAAAA CAGCGGGCACCGCC CGTC GGCGACGCCCGCTG TCAAGCGAACCGGCT Bphy_3857 830916 - 829159 - | gamma-glutamyltransferase TERM 730 829608 - 829553 - G 72 -13.2 -3.05384 | opp_overlap 829594 829605 GTCGGTTCGATCGAA TTCGCGTCGCTGCCCACCACGCCGAA CATG TTCGGCACGCCAGGCTTCGATGCGAA GTCGTCCATTTCGTC TERM 731 830972 - 831002 + r 73 -11.1 -3.43049 | opp_overlap 830959 830974, overlap 830974 AGCGGGCATTTGCGA AACGGCCCAATGC TTGAT GCATAGGGCCGTA TTCATTCGCTTATTC TERM 732 830974 - 831000 + r 82 -13.7 -3.27511 | opp_overlap 830959 830974, overlap 830972 CGGGCATTTGCGAAA CGGCCCAATGC TTGAT GCATAGGGCCG TATTCATTCGCTTAT TERM 733 831000 - 830974 - R 83 -13.7 -3.55444 | opp_overlap 830974 830972, overlap 830959 CGGGCATTTGCGAAA CGGCCCAATGC TTGAT GCATAGGGCCG TATTCATTCGCTTAT Bphy_3858 832435 - 831026 - | aminotransferase class-III Bphy_3859 833977 - 832472 - | aldehyde dehydrogenase TERM 734 834025 - 834035 + r 100 -4.6 -5.7946 | overlap 834019 834018 834016 CACTTTAGTGGCGCT GCGC GCC GTGC TTTTTTTGTTCGCGG Bphy_3860 834617 - 834147 - | AsnC family transcriptional regulator Bphy_3861 835670 - 834633 - | ectoine utilization protein EutE Bphy_3862 836886 - 835675 - | ectoine utilization protein EutD Bphy_3863 837897 - 836896 - | ectoine utilization protein EutC Bphy_3864 838886 - 837894 - | ectoine utilization protein EutB Bphy_3865 840439 - 839042 - | transcriptional regulator TERM 735 840297 - 840345 + g 77 -11.1 -3.71873 | gap 3, overlap 840286 ATCGCGAGTTCCGAC GCGACGTCGC-GCTGCGGCGGC AGACGCGC GCCGGCGC-GCAGCGAC-TCGC TTTCGATGTCGCTGG Bphy_3866 840679 - 841533 + | ectoine/hydroxyectoine ABC transporter solute-binding protein Bphy_3867 841729 - 842400 + | ectoine/hydroxyectoine ABC transporter, permease protein EhuC Bphy_3868 842397 - 843056 + | ectoine/hydroxyectoine ABC transporter, permease protein EhuD Bphy_3869 843053 - 843940 + | ectoine/hydroxyectoine ABC transporter, ATP-binding protein TERM 736 843947 - 843976 + T 74 -13.5 -2.52623 | overlap 843946 843945 843966 843970 GCTGTTTGAGGTGTG GCGCGGGGTTCGC AGCA GCGAGCGTCGCGC GTGTTCTACGCCCGC Bphy_3870 845385 - 843982 - | major facilitator transporter Bphy_3871 846377 - 845613 - | hypothetical protein Bphy_3872 847388 - 846399 - | membrane protein Bphy_3873 848269 - 847400 - | 2OG-Fe(II) oxygenase Bphy_3874 848877 - 848266 - | CDP-alcohol phosphatidyltransferase TERM 737 849588 - 849558 - g 73 -12.4 -3.4252 | GGGCAGCGACGAGAA GGTGCAAGCCGCCG TGA CGGCGGCGGGCAGC AGCGCCATCGTCCAT TERM 738 849596 - 849628 + G 78 -7.8 -4.36914 | gap 2 CGGGCAGCAGCGCCA TCGTCCATCACGTCGC GCC GC-ACGTGACGG-CGA TTTTCTGCAAGCGCA Bphy_3875 849247 - 849648 + | hypothetical protein TERM 739 851486 - 851506 + F 76 -12.5 -3.02461 | TCCTGATTTATTTAC GCAGCCAGC ACG GCTGGCCGC TATTGCAGCAGCTTC TERM 740 852224 - 852175 - g 93 -17.9 -3.68351 | gap 1, overlap 852177 852210 CTCGTACTACCGAAA GAGGCCGCCGCCGAACTCTTCGAA TTG TCCGAAGA-CGCGGCAGCGGCCGC GATCCGCACGACGCG TERM 741 852222 - 852177 - g 100 -19.1 -3.42395 | gap 1, overlap 852175 852210 CGTACTACCGAAAGA GGCCGCCGCCGAACTCTTCGAA TTG TCCGAAGA-CGCGGCAGCGGCC GCGATCCGCACGACG Bphy_3878 852034 - 852462 + | histidine triad (HIT) protein Bphy_3879 852993 - 852490 - | hypothetical protein TERM 742 853253 - 853238 - H 100 -11.8 -6.28631 | TAAAGCAAAAAAAAA GCGGCC CGAA GGCCGC TGAAAAACAGATGAA Bphy_3880 853689 - 854843 + | porin TERM 743 854927 - 854953 + F 100 -20.9 -4.85782 | opp_overlap 854927, overlap 854944 CAGCGCAACACCTAA CGCGCGCGTGC ATCCA GCACGCGCGCG TTTCTTTTTGCCCAA TERM 744 854953 - 854927 - f 100 -20.9 -3.19026 | opp_overlap 854927 854944 CAGCGCAACACCTAA CGCGCGCGTGC ATCCA GCACGCGCGCG TTTCTTTTTGCCCAA Bphy_3881 855116 - 855538 + | hypothetical protein Bphy_3882 855528 - 856079 + | hypothetical protein TERM 745 856115 - 856137 + F 91 -8.3 -5.0538 | overlap 856113 856117 856128 856129 CCATACCTGCAGTCA CGGCCCGCG TATTT CGCGGGCTA TTTTTTCGCCTGCGC TERM 746 856117 - 856135 + F 93 -13.1 -4.15748 | overlap 856113 856115 856128 856129 ATACCTGCAGTCACG GCCCGCG TATTT CGCGGGC TATTTTTTCGCCTGC Bphy_3883 856163 - 856720 + | hypothetical protein Bphy_3884 858029 - 856857 - | FAD dependent oxidoreductase Bphy_3885 859652 - 858153 - | aldehyde dehydrogenase TERM 747 859107 - 859120 + g 83 -9.5 -4.37658 | overlap 859100 859109 CTGGTTGACCGCGAG CGCCG TCAG CGGCG TTTTCTCCGACGGTT Bphy_3886 859986 - 860618 + | XRE family transcriptional regulator TERM 748 860673 - 860630 - T 75 -11.8 -3.27511 | opp_overlap 860638 860644, overlap 860638 860644 ATAAGCGAAGTAACA CCATTGAAGAAAAAGGCCTG AATT CAGGCCTTTTTCTTATGCGG CCGAGCGCGCCTGCG TERM 749 860638 - 860665 + T 90 -17.2 -3.28712 | opp_overlap 860630 860638 860644, overlap 860644 AGTAACACCATTGAA GAAAAAGGCCTG AATT CAGGCCTTTTTC TTATGCGGCCGAGCG TERM 750 860665 - 860638 - T 89 -17.2 -3.137 | opp_overlap 860638 860644, overlap 860630 860644 AGTAACACCATTGAA GAAAAAGGCCTG AATT CAGGCCTTTTTC TTATGCGGCCGAGCG TERM 751 860659 - 860644 - T 100 -10.4 -5.11063 | opp_overlap 860644 860638, overlap 860638 860630 ACCATTGAAGAAAAA GGCCTG AATT CAGGCC TTTTTCTTATGCGGC TERM 752 860644 - 860659 + T 100 -10.4 -5.18726 | opp_overlap 860638 860630 860644, overlap 860638 ACCATTGAAGAAAAA GGCCTG AATT CAGGCC TTTTTCTTATGCGGC Bphy_3887 861793 - 860666 - | 4-hydroxyphenylpyruvate dioxygenase TERM 753 860811 - 860792 - G 74 -5 -4.58685 | gap 1, overlap 860798 AAAGGTCTGGAAAAA CAGA-AGCG GCA CGCCGTCTG CGCCGATCTCGCCGT Bphy_3888 863018 - 861909 - | LysR family transcriptional regulator TERM 754 862475 - 862422 - G 90 -11.5 -4.33151 | gap 1, overlap 862424 CACGACAACGCAAAA GTCGAGCAGCTGCGTGGCCGGCGACG TCC CGCCCGCGGCCA-GCGGATGCCCGGC ACGCACGACGGCGAT Bphy_3889 863127 - 863831 + | protocatechuate 3,4-dioxygenase, beta subunit Bphy_3890 863834 - 864424 + | protocatechuate 3,4-dioxygenase, alpha subunit TERM 755 864548 - 864565 + T 100 -9.8 -5.40072 | GAGCAGTACTTGGAT GCCCGC TTCGAC GCGGGC TTTTTTTCGCCCCCC Bphy_3891 865386 - 864601 - | class II aldolase/adducin family protein Bphy_3892 865722 - 865468 - | hypothetical protein TERM 756 866589 - 866561 - R 75 -12.4 -3.21772 | overlap 866559 AATGCCCTCAGAACA CCGTGCGCCTGA AGCGG TCAGACGCGCGG CAGATCGTCGATGAA Bphy_3894 866898 - 866578 - | hypothetical protein Bphy_3895 867246 - 866935 - | hypothetical protein Bphy_3896 867258 - 868154 + | hypothetical protein TERM 757 869190 - 869214 + G 77 -15.7 -2.52464 | ATCGACGCGCACGCC GCAGGCCAACC CGC GGTCGGCCTGC TCGCTTCGGGGCAAG Bphy_3897 868296 - 869759 + | hypothetical protein TERM 758 870072 - 870056 - g 75 -4.3 -4.59773 | overlap 870057 CGCCACGCTTAAAAA CGCGGAG GCG CTGCACG TGCCGCTGCATCAAC Bphy_3898 869778 - 870596 + | hypothetical protein Bphy_3899 873071 - 870606 - | peptidoglycan glycosyltransferase TERM 759 873068 - 873051 - G 71 -4.1 -4.57073 | overlap 873052 TATTTCCCGGAAAAA CGACAGT ACTG ACTGTCT CACGCTAACGCACCA TERM 760 873215 - 873175 - R 84 -2.4 -5.42259 | gap 1, overlap 873176 TCACCGCCAAAAAAA TCGGCCGGTCCCGCGCCGC TTGC GCAG-ACAAACTCGGCCGA TGCATACGGTTAACG Bphy_3900 874711 - 873236 - | Na+/solute symporter Bphy_3901 874905 - 874708 - | hypothetical protein Bphy_3902 875991 - 875101 - | LysR family transcriptional regulator TERM 761 875267 - 875222 - G 86 -13.5 -3.83998 | gap 3, overlap 875210 GGAGGCGAGACGAAA TCGCCG-AGCACTTCGACGAGC TTGCC GCTCG-CGA-GCGCTTCGGCGA CGATGAACTCCGGCA Bphy_3903 876160 - 876885 + | pirin domain-containing protein Bphy_3904 876928 - 877338 + | DoxX family protein TERM 762 877368 - 877387 + F 100 -16.4 -3.81146 | CATTGCAGTGCTCAA GGGCGGCC TCAT GGCCGCCC TTATTCATTCCGCAC TERM 763 878132 - 878093 - g 71 -7.6 -4.12902 | opp_overlap 878101 CAACTACTTCGAAAA CGCATGGCTGCCCGTCGC GCTC GGGGCGGGCCTCTATGCG GACAATGCCGTGAAA Bphy_3905 877554 - 878795 + | porin TERM 764 878914 - 878952 + F 80 -10.5 -3.9644 | gap 1, opp_overlap 878927, overlap 878917 CACATACATCTTGCG TAACTGTGATATACAGGG AAAA CCC-GTAAATCGCAGTTA TTCTTCTATTGCAGA TERM 765 878917 - 878949 + F 74 -7.8 -4.10144 | gap 1, opp_overlap 878927, overlap 878914 ATACATCTTGCGTAA CTGTGATATACAGGG AAAA CCC-GTAAATCGCAG TTATTCTTCTATTGC TERM 766 879540 - 879554 + G 75 -6.4 -4.44667 | CCGTGCCCGCATTCT TCGTCT ACG GGACGA TTTATTCTTCAAGCG Bphy_3907 879293 - 880327 + | fatty acid desaturase Bphy_3908 880365 - 880712 + | Rieske (2Fe-2S) domain-containing protein Bphy_3909 880709 - 881956 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Bphy_3910 881953 - 882462 + | hypothetical protein Bphy_3911 883532 - 882459 - | LacI family transcription regulator TERM 767 884300 - 884316 + G 91 -7.2 -5.00616 | ATCGACCCGGCCGAA GCGGCG CGTGC CGTCGC TTTTTTGGCAAGCAG Bphy_3912 883607 - 884434 + | short-chain dehydrogenase/reductase SDR Bphy_3913 885396 - 884482 - | LysR family transcriptional regulator Bphy_3914 886160 - 886369 + | hypothetical protein Bphy_3915 886480 - 886998 + | phasin family protein TERM 768 887052 - 887030 - f 78 -11.2 -3.74519 | opp_overlap 887045 887049 AACAGTTGTAGGAAA CCGGACGCGA TCC CCGCGTCAGG CGCATTTTGAGCCCG TERM 769 887063 - 887080 + F 100 -12.7 -5.86061 | overlap 887049 TCAGGCGCATTTTGA GCCCGCT TTCG AGCGGGC TTTTTTTTCATCGCG Bphy_3916 887096 - 887452 + | hypothetical protein TERM 770 887629 - 887612 - g 70 -7.7 -3.9693 | gap 1 CAGCGAGGCAAAGAA GCGG-GAG ATT CTCGCCGC GATGATTGGATTGCG TERM 771 887852 - 887818 - g 80 -13.7 -3.31144 | gap 1, overlap 887819 CGTTCACGCCGACAA CGGGCGAAGCGTACGC GCAG GCGTACA-TTCGCCCA CTCGCGCCGACGCTC TERM 772 887851 - 887819 - g 74 -15 -2.58544 | gap 1, overlap 887818 GTTCACGCCGACAAC GGGCGAAGCGTACGC GCAG GCGTACA-TTCGCCC ACTCGCGCCGACGCT TERM 773 888375 - 888321 - g 71 -9.3 -3.73072 | gap 2, overlap 888349 AATGGGTCGACCAAA CCGACAGT-C-ATGCTCGTCGGTGGCG AAA CACGGCCGACGATCATCGTACAGTCGG GCGACAAGCCGCCCG Bphy_3917 887484 - 888551 + | hypothetical protein TERM 774 888600 - 888573 - T 100 -14.2 -4.56597 | gap 1, opp_overlap 888551 CGCCCGCTGTAAAAA GCGGGG-TGCACG CTT CATGCAACCCCGC CGCGTGACAGCTGTG Bphy_3918 888981 - 888643 - | hypothetical protein Bphy_3919 889257 - 890012 + | acetoacetate decarboxylase Bphy_3920 890962 - 890075 - | 2-dehydropantoate 2-reductase TERM 775 890444 - 890402 - G 88 -15.6 -3.34962 | opp_overlap 890441, overlap 890441 CGTGATAGCCGACAA CGCGTTGTATGCGCAGTTGA GAA TCAGCTTCGCCCACAACGCG CCGCGCACGTTGTCC Bphy_3921 891940 - 891050 - | alpha/beta hydrolase fold protein TERM 776 891517 - 891529 + g 71 -10.5 -3.56092 | GGCGCAGTTCGTTTT CCGGC AAC GCCGG TTTCGCCGATGCTGC TERM 777 891720 - 891687 - G 71 -9.5 -3.73072 | gap 1 AACGCGTCGAGCAAA GCGAGCAGATCGGCGC CGA GCGCAG-CCTGCTGGC CAGAGCGCGGCGTAT TERM 778 891770 - 891749 - G 82 -4.3 -5.06816 | overlap 891750 891751 ATCGGCGAACAAAAA GCGCGTC GGCCTATA GCCGCGC AGATAAGGCGCGATC TERM 779 891868 - 891851 - G 71 -9.1 -3.71645 | AATGTCATACGGAAA GCCGTGC AGCA GCACGAC GGGCCAACCGTCCGG TERM 780 892948 - 892921 - g 73 -9.8 -3.83026 | gap 1, opp_overlap 892921, overlap 892922 TGGCCGCACACGAAA CGCATGCGAGCGC ATC GGGC-CGCACGCG TCTTGCACGCGGACT Bphy_3922 892221 - 893555 + | major facilitator transporter Bphy_3923 894645 - 893575 - | glycosyl transferase group 1 TERM 781 894625 - 894647 + g 93 -3.4 -5.43866 | GTACTTCAGTGCATT GCACGACAAT CCG ATTTTCATGC TTTTTTTCGAGCTTC Bphy_3924 895637 - 894720 - | glycosyl transferase family protein TERM 782 895141 - 895123 - G 74 -10.2 -3.73775 | opp_overlap 895124, overlap 895124 CCCAGCGCGATGAAA CGCGCTGG CGA CCAGCGCT TGTCGTGCGTGCTCG TERM 783 895140 - 895124 - G 73 -13.7 -2.84051 | opp_overlap 895124, overlap 895123 CCAGCGCGATGAAAC GCGCTGG CGA CCAGCGC TTGTCGTGCGTGCTC TERM 784 895124 - 895140 + g 81 -13.7 -3.42996 | opp_overlap 895124 895123 CCAGCGCGATGAAAC GCGCTGG CGA CCAGCGC TTGTCGTGCGTGCTC TERM 785 895566 - 895548 - G 70 -11 -3.31188 | overlap 895541 CACGATAACCATCAA GATCAGCG AAT CGCCGATC GCGTTCGACATCATG Bphy_3925 896598 - 895639 - | hypothetical protein TERM 786 896783 - 896807 + r 100 -4.9 -5.78622 | overlap 896784 GTTCACCTTTCCGCT TTGCGCCGCTG TTC TACTGGCGCAG TTTTTTTTCCGGTAC TERM 787 896967 - 896986 + r 85 -9.2 -4.41548 | opp_overlap 896950 896968, overlap 896968 CAAGCAATGCGAAAA AGCCCGCT TGAA AGCGGGCC TTTTATCGCGTATCA TERM 788 896985 - 896968 - R 100 -12.7 -4.68506 | opp_overlap 896967 896968, overlap 896950 AAGCAATGCGAAAAA GCCCGCT TGAA AGCGGGC CTTTTATCGCGTATC TERM 789 896968 - 896985 + r 79 -12.7 -3.24447 | opp_overlap 896950 896968, overlap 896967 AAGCAATGCGAAAAA GCCCGCT TGAA AGCGGGC CTTTTATCGCGTATC Bphy_3927 897871 - 897035 - | two component transcriptional regulator TERM 790 898140 - 898119 - H 76 -3.5 -4.93696 | overlap 898120 GTGAAACATGAAAAA CGGCGGCCG TGGG CGCTCGCCA TGAGAGTCGGCATTA TERM 791 898450 - 898425 - g 77 -16.1 -2.58714 | overlap 898421 CCCGATATGAACCCA CCGGGCGACGG ACCA CCGCCGCCCGA CACCGCCCCGCCCTA TERM 792 899281 - 899266 - g 74 -2.6 -4.77165 | gap 1 TCGCCGACAAGAAAA TCGCGTT GGA AACG-GA TATCGGCGAAGCGAG Bphy_3928 898140 - 899663 + | integral membrane sensor signal transduction histidine kinase Bphy_3929 899656 - 900399 + | two component transcriptional regulator Bphy_3930 900691 - 900434 - | hypothetical protein Bphy_3931 900991 - 900761 - | hypothetical protein Bphy_3932 902028 - 901207 - | hypothetical protein TERM 793 901649 - 901674 + g 79 -2.6 -5.02074 | gap 1, opp_overlap 901640, overlap 901657 AATTCAGTGGGCGAC GAGCA-CACCA GTGCA TAGTGCTGCTC TTTTTTCCGCCCTGA TERM 794 901919 - 901909 - G 80 -4.6 -4.83615 | overlap 901911 GACGCCCCATAAAAA GCGA CCG CCGC CCAGACGCCGCTCCC Bphy_3933 902119 - 902463 + | hypothetical protein Bphy_3934 904362 - 902572 - | acyl-CoA dehydrogenase domain-containing protein Bphy_3935 905559 - 904546 - | AraC family transcriptional regulator TERM 795 905347 - 905314 - G 80 -13.9 -3.35197 | opp_overlap 905337 GCTGAGAGAGAGGAA TTTCAGCGTGCCGCT GCGA AGCGGCCGGCTGAAA ATGCCCGGCATTTCG Bphy_3936 907401 - 905596 - | zinc finger SWIM domain-containing protein TERM 796 905871 - 905905 + g 73 -5.6 -4.44797 | gap 1, opp_overlap 905838, overlap 905872 ACAATGCCGTCGCGA TGGGGCCGCC-GGTG AACACC CGCCAGGCTGCCTCG TTTTCATGTTCGTCG TERM 797 905998 - 906030 + g 72 -2.8 -4.60924 | overlap 906022 CAGCTTCGACTCCTC GCGCTCGACG-ATG GCCCACA TATGCG-CGAGCGC TTTTTCCCGCGTTTC Bphy_3938 909487 - 907685 - | acyl-CoA dehydrogenase domain-containing protein TERM 798 910687 - 910649 - R 72 -9.4 -3.64049 | overlap 910653 TGAAGAAGTTTGAAA CCGAGTGGATCACGGCCC GAG AGGCCGCACGGCACTCGG GGACGAAGTTCCACG TERM 799 911112 - 911091 - R 100 -9.3 -5.11112 | opp_overlap 911088 911091 AAAGGCCAACAAAAA GACCCGGTC TGAA GGCCGGGCC TAATTAGTCGATTGG TERM 800 911193 - 911149 - R 100 -16 -5.23316 | gap 2 TACTACACGAAAAAA GAGGCTTCTGGGATCGCTTCGC TGA GCAAAACGATCC--GAAGCCTC GATGTAGCGCTATCA Bphy_3941 913284 - 911227 - | RNA polymerase, sigma 70 subunit, RpoD TERM 801 911637 - 911651 + g 71 -9.2 -3.73402 | CCAGCGTTGCCGGAT CCGGCT CCA GGCCGG TTTCCTGCAGAATCT TERM 802 913111 - 913147 + g 78 -3.1 -4.86731 | gap 3, overlap 913112 913112 CTCCTCGACGGTGCC AG-GCTGC-GAA-GACGC GAAC GCGTCCTTCAGCAGCGCC TTTTCTTTAGCGCGG Bphy_3942 915602 - 913710 - | DNA primase Bphy_3943 916151 - 915705 - | hypothetical protein TERM 803 916238 - 916212 - R 100 -13.1 -4.64766 | gap 1, opp_overlap 916212 TGCAGAGCGCAAAAA CCCGCTTG-GGA TCGT TCCTCAAGCGGG TTAGTGCCAAATACG TERM 804 916212 - 916238 + r 76 -13.1 -3.14931 | gap 1, opp_overlap 916212 TGCAGAGCGCAAAAA CCCGCTTG-GGA TCGT TCCTCAAGCGGG TTAGTGCCAAATACG Bphy_3944 916659 - 916447 - | ribosomal protein S21 TERM 805 916569 - 916582 + g 75 -8.1 -4.22883 | CGCGGGCACGCAATT CGGTC AGCA GACCG TTCTTTTCAATCGTG Bphy_3945 917986 - 916769 - | hypothetical protein Bphy_3946 918101 - 919126 + | glycoprotease family metalloendopeptidase TERM 806 919141 - 919151 + T 90 -4.6 -5.40072 | overlap 919139 919138 AGGGTTTGGCTTTGG CTGG TAG CCGG TTTTTTTGCGCCGGC Bphy_3947 920012 - 919206 - | hypothetical protein TERM 807 920078 - 920059 - R 100 -16.4 -3.68359 | overlap 920053 CGCGCAAAATGACAA CCGCCGGC TTGC GCCGGCGG AGCCCGGCGGGTACG TERM 808 920083 - 920103 + r 74 -14 -2.55668 | overlap 920082 TGCGCCGGCGGAGCC CGGCGGGT ACGCG ACCCGCCG ATTCATATCGGAGTA Bphy_3948 922058 - 920160 - | deoxyxylulose-5-phosphate synthase TERM 809 921242 - 921264 + g 77 -13.5 -3.41745 | opp_overlap 921246, overlap 921246 TCGTCACGACGTGCA GGAACTGCG GACCG CGCAGTTCC TTGATGTTCTGCAGC Bphy_3949 923030 - 922155 - | polyprenyl synthetase Bphy_3950 923362 - 923045 - | exodeoxyribonuclease VII, small subunit Bphy_3951 923649 - 924755 + | Rieske (2Fe-2S) domain-containing protein TERM 810 924801 - 924818 + F 100 -12.7 -5.64421 | opp_overlap 924801 CTATGAACGAGGAAA GACGGGC TTCG GCCCGTC TTTTTTGTTTAGACT TERM 811 924818 - 924801 - f 87 -12.7 -3.85704 | opp_overlap 924801 CTATGAACGAGGAAA GACGGGC TTCG GCCCGTC TTTTTTGTTTAGACT Bphy_3952 924880 - 925752 + | rhodanese domain-containing protein Bphy_3953 926886 - 925816 - | Glu/Leu/Phe/Val dehydrogenase dimerisation region TERM 812 926909 - 926955 + H 70 -12.3 -2.79183 | gap 1, opp_overlap 926929 926933 CCTTCCTTGTGGGCA GGCGGTTGAGTCTGCGCAAAGC GATC GCTTCGCGCAGGCT-GGCCGCA TGTCATCCGGGTCGC TERM 813 927136 - 927115 - H 74 -6.7 -4.42851 | gap 1, overlap 927117 CCAACAAACTTAAAA TATGAAGACG GAT CGTCTTCA-A CGGAGACAGCATGAA TERM 814 927135 - 927117 - H 83 -11.8 -3.80537 | overlap 927115 AACAAACTTAAAATA TGAAGACG GAT CGTCTTCA ACGGAGACAGCATGA Bphy_3954 927147 - 927605 + | AsnC family transcriptional regulator Bphy_3955 929574 - 927637 - | diguanylate cyclase/phosphodiesterase TERM 815 929712 - 929749 + r 82 -14.1 -2.87132 | opp_overlap 929701 929706 929740 GATACGAGACGGATT CTCGCGCCGATCATTCG CGCG CGAACGAGCCGCGCGAG TGTCTCCGCGACGCG Bphy_3956 931433 - 929841 - | YidE/YbjL duplication TERM 816 931450 - 931466 + r 73 -12.3 -3.08679 | opp_overlap 931458 TTCGCTCCACCTCTT GCAAGCG ATG CGCTTGC TGTTAGCTAACGAAA Bphy_3957 932981 - 931581 - | histidine kinase Bphy_3958 933711 - 932998 - | two component transcriptional regulator TERM 817 933730 - 933742 + H 82 -9.1 -4.42653 | opp_overlap 933738 CGCGCGATTGTAAGT CGGCA CAA TGCCG TTTTCTGCATCGGGT Bphy_3959 933883 - 934893 + | nitrate/sulfonate/bicarbonate ABC transporter periplasmic ligand-binding protein Bphy_3960 934938 - 935735 + | ABC transporter related Bphy_3961 935760 - 936623 + | binding-protein-dependent transport systems inner membrane component TERM 818 936659 - 936677 + F 100 -13.1 -5.52384 | TTTTGTAGTTGCACA GCGCCCC TGTAT GGGGCGC TTTTTTTCGTCGAAA Bphy_3962 936789 - 937466 + | two component heavy metal response transcriptional regulator TERM 819 937483 - 937528 + G 71 -12.1 -3.23216 | gap 4 GCGCGGCCGCTCGAT CACCACCA-CG-C-TCGCGCTCG CATT CG-GCGCGACGACGCTGGTGGTG TTCGTGCTGGTCGGC TERM 820 937900 - 937885 - g 77 -4.6 -4.65895 | overlap 937887 CGTCGGATGGAAAAA CAGCAC CGGC GCGCCG ATACGCGGCGTCGCA TERM 821 938658 - 938640 - g 78 -10.2 -4.00124 | CACGCGACAAGGAAA TCGCGCTC GAC GCGCGCGA GGCCGGCGACGGCGT Bphy_3963 937466 - 938929 + | heavy metal sensor signal transduction histidine kinase Bphy_3964 940302 - 938968 - | integral membrane sensor signal transduction histidine kinase Bphy_3965 940961 - 940299 - | two component transcriptional regulator TERM 822 941062 - 941037 - R 83 -14.7 -3.14564 | opp_overlap 941042 CTATGGCTTCATGAA CGCGCGTCAGC TCGC GCTCACGCGCG GCGCACTGGTTGCAG Bphy_3966 941495 - 941043 - | ferric uptake regulator family protein Bphy_3967 942059 - 941640 - | hypothetical protein Bphy_3968 942337 - 943239 + | ubiquinol oxidase, subunit II Bphy_3969 943242 - 945248 + | cytochrome o ubiquinol oxidase, subunit I TERM 823 945800 - 945820 + G 77 -4.7 -4.66057 | TTCTGGCACTTCCTG GACATCG TCTGGAT CGGTGTC TTTTCGTTTGTCTAT Bphy_3970 945248 - 945853 + | cytochrome o ubiquinol oxidase, subunit III Bphy_3971 945854 - 946198 + | cytochrome o ubiquinol oxidase subunit IV Bphy_3972 946593 - 946285 - | hypothetical protein TERM 824 946619 - 946644 + H 74 -6.1 -4.55295 | opp_overlap 946624, overlap 946620 CAAATAGTCGCGCCA AGTCAGTGGAA GCGC TTCCACTGCCA TTTGTTTGTGCACCG TERM 825 946739 - 946720 - H 93 -5.7 -5.47159 | opp_overlap 946727, overlap 946722 CGCAATAAATAAAAA TCGCGCT TGTGGC AGCGCAA CATTATAATTTTGAG TERM 826 947402 - 947431 + G 72 -2.8 -4.66418 | gap 2, opp_overlap 947408, overlap 947395 947409 GATCGGCACGTGGGG CGAACAGCGCCGCG TCTA TGCGGC-C-GTGCG TTTCTTCTTCTTTTC Bphy_3973 946932 - 948467 + | proton-translocating NADH-quinone oxidoreductase, chain M TERM 827 948491 - 948511 + F 100 -16.1 -5.27335 | opp_overlap 948481 ACCGACCGCATTCGA CGGGCGTCC ACT GGGCGCCCG TTTTTCTTTGCGCCA Bphy_3974 948833 - 949951 + | ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein Bphy_3975 949982 - 950797 + | binding-protein-dependent transport systems inner membrane component Bphy_3976 950794 - 951567 + | ABC transporter related TERM 828 951767 - 951746 - g 79 -2.1 -5.00884 | overlap 951747 ATGCCGCCGAAAAAA GCGAGCGGA TGAA TCTGCCCGA CACGCTCAAGTGTCA Bphy_3977 951604 - 952311 + | hypothetical protein Bphy_3978 952327 - 952971 + | hypothetical protein TERM 829 954331 - 954290 - g 73 -13.8 -2.91264 | gap 1, opp_overlap 954301 CTGCGCATTGACACA TGGATCGAAGC-GGGCTGC GAAGT GCCGCCCTGGTTCGATCCA ATGCTCGCGAAGCTG TERM 830 955298 - 955336 + G 71 -7.3 -4.13246 | gap 1 TTCACGGGCGACATG CCCGT-GATCCTCGGTCC GGAT GGCCCGAGCCTCGGCGGG TTTGTCTGTCCCGTC Bphy_3979 953168 - 956779 + | urea carboxylase TERM 831 957693 - 957675 - g 75 -10.2 -3.90744 | opp_overlap 957676 CGGCGCTCGAAACAA TCGGCGGC GAG GCCGTCGA AATCGACTTCGCGCC TERM 832 957703 - 957726 + G 80 -14.6 -3.05997 | opp_overlap 957700, overlap 957676 957698 CGTCGAAATCGACTT CGCGCCGTTT CTCG AAGCGGCGCG TCTGCTTTATGAAGG TERM 833 958303 - 958339 + G 74 -15.2 -2.64422 | overlap 958294 GCAGTTGCGCTCGCG TGGCGCGC-GGCTCGTCG AAG CGACG-GCCAGCGCACCA TGCTATCGGCTGTAT Bphy_3980 956822 - 958651 + | allophanate hydrolase TERM 834 958696 - 958668 - f 100 -14.5 -4.08394 | overlap 958669 ACAGCCGTTGCAAAA TGCGGCGCGCG TGCGATG CGCGCGCCGCT CGCTCAAGTCGTCGC TERM 835 958695 - 958669 - f 91 -18 -3.04715 | overlap 958668 CAGCCGTTGCAAAAT GCGGCGCGCG TGCGATG CGCGCGCCGC TCGCTCAAGTCGTCG TERM 836 959261 - 959248 - g 74 -2.3 -4.72272 | GGCGTGCAGGAAAAA GCCCG TTCG CAGAC CTTTCGCGACTACCG Bphy_3981 959017 - 959691 + | antibiotic biosynthesis monooxygenase Bphy_3982 960559 - 959696 - | short-chain dehydrogenase/reductase SDR Bphy_3983 960916 - 961335 + | hypothetical protein Bphy_3984 961370 - 961702 + | hypothetical protein Bphy_3985 961966 - 962163 + | hypothetical protein TERM 837 962172 - 962196 + T 86 -15.7 -2.70932 | overlap 962190 962193 CCGCTGACCGACGCC GCGAGCGCTAC CCG GTTGCGCTCGC TCGTTCGCACGCGCC Bphy_3986 963076 - 962243 - | CHAD domain-containing protein TERM 838 962532 - 962546 + g 74 -12.8 -3.18681 | opp_overlap 962513, overlap 962514 TAGTCCGAGCGTTTG GCGCGC GCC GCGCGC TTCATGCGCTTCGCC Bphy_3987 963700 - 963200 - | protein tyrosine phosphatase Bphy_3988 964376 - 963972 - | peptidylprolyl isomerase FKBP-type TERM 839 964560 - 964542 - R 80 -10.3 -4.07568 | opp_overlap 964556 TCGCGGGCTGGAAAA GCCGCTA ACGCG TAGCGGC CCGAAGCCTCGTTCG Bphy_3989 965110 - 964577 - | alkylhydroperoxidase Bphy_3990 965314 - 966213 + | hypothetical protein Bphy_3991 966753 - 966535 - | hypothetical protein Bphy_3992 967159 - 967632 + | response regulator receiver protein Bphy_3993 967721 - 969274 + | phospholipase D/transphosphatidylase Bphy_3994 969300 - 969548 + | hypothetical protein Bphy_3995 970444 - 969551 - | LysR family transcriptional regulator Bphy_3996 970520 - 971278 + | hypothetical protein Bphy_3997 971686 - 971267 - | hypothetical protein Bphy_3998 972400 - 971735 - | hypothetical protein TERM 840 972167 - 972145 - G 82 -15.6 -3.13403 | overlap 972125 972143 TGCCGCCGACGAACA CCACGTCGCG ATC CGCGACATGG GCGATATACACGTCG TERM 841 972935 - 972948 + G 74 -5.2 -4.56597 | overlap 972925 GCCTGGCGCAGTTCG CGCG CAACTT CGCG TTTTTCGACGCACCG TERM 842 973225 - 973197 - g 82 -15.9 -3.14344 | opp_overlap 973202 GAGTGCCGCGATCAA CCAGTGGCGCGCG CAG CGCGCGCCTTTGG ATGAGTTCGCGCAAT TERM 843 973202 - 973220 + G 93 -17.4 -3.68619 | opp_overlap 973197 CCGCGATCAACCAGT GGCGCGCG CAG CGCGCGCC TTTGGATGAGTTCGC Bphy_3999 972583 - 973254 + | nitroreductase Bphy_4000 973495 - 973983 + | sensor protein Bphy_4001 975539 - 974076 - | catalase TERM 844 976651 - 976666 + G 70 -2.4 -4.66987 | overlap 976648 976653 976660 CACCGATCTCTATTG CCCGTG GGCG CGCGAG TTTTCTTGCGATCTG Bphy_4002 975971 - 976849 + | RpiR family transcriptional regulator Bphy_4003 976855 - 977421 + | peptidase M15D vanX D-ala-D-ala dipeptidase TERM 845 977953 - 977938 - g 88 -9 -4.6902 | GCAGAACGTGAAAAA GGTCGA CGAC TCGACC GTCAGCATCACGACA TERM 846 978273 - 978253 - g 72 -9 -4.07568 | gap 1, overlap 978235 TCTGCTGCTCGAAAA CG-GCGACG CAGA CGTCGCGCG CAATCTGAGCCCCGA TERM 847 978734 - 978703 - g 74 -10 -3.78934 | opp_overlap 978699 978695 TCCCGGCGACAACAA GCAGACGCTCGCGA AGTA TCGTGCGCGTCAGC ATGATATCTATATCG Bphy_4004 977480 - 979087 + | extracellular solute-binding protein Bphy_4005 979100 - 980170 + | binding-protein-dependent transport systems inner membrane component Bphy_4006 980229 - 981143 + | binding-protein-dependent transport systems inner membrane component TERM 848 981626 - 981575 - g 70 -4.9 -4.37886 | CGATGCGCCAGAAAA TCGTCGCCGCGCTCGAAGCCGTG CATATC CGCAATCCCGAACGCGTCGCCGA TTCATATCCGCACGA Bphy_4007 981145 - 982038 + | ABC transporter related TERM 849 982617 - 982628 + G 72 -7.2 -4.2074 | overlap 982614 GTCAGCCACAATCTG GCCG TGGT CGGC TTTCTGTGTTCGCGC TERM 850 982783 - 982767 - g 75 -6.5 -4.45544 | overlap 982768 GGCTATCAACGAAAA GCCATCG AAG CGATGGG GGTCGACACGTCGCC Bphy_4008 982035 - 982802 + | ABC transporter related TERM 851 982810 - 982831 + T 90 -10.8 -4.70659 | opp_overlap 982809 982810 CGCCGTGAAACGAAT GCGCGGCC GCTCGG GGCTGCGC TTTTTCACTCTACGG Bphy_4009 984200 - 982836 - | major facilitator transporter TERM 852 983962 - 983921 - G 71 -4.3 -4.49781 | gap 1, overlap 983955 983956 AAAACACCGATAAAA CCAGCACCGCTTTGCGCCCG ATG CGATCGGCAAACGGT-CCGG CACCCAACGCGCCGA Bphy_4010 984609 - 984271 - | NIPSNAP family protein TERM 853 984306 - 984320 + g 79 -11.4 -3.83026 | TTCTGAATTCGACGC GCCGGA TGA TCCGGC TTTCCTGTGCGACGA Bphy_4011 986384 - 984621 - | fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein Bphy_4012 987243 - 986413 - | short-chain dehydrogenase/reductase SDR Bphy_4013 987389 - 988282 + | AraC family transcriptional regulator Bphy_4014 989466 - 988294 - | 4-hydroxybenzoate 3-monooxygenase Bphy_4015 989701 - 990057 + | transport-associated Bphy_4016 990547 - 990086 - | 2Fe-2S iron-sulfur cluster binding domain-containing protein Bphy_4017 992841 - 990535 - | aldehyde oxidase and xanthine dehydrogenase molybdopterin binding TERM 854 993464 - 993432 - R 100 -15.6 -4.1021 | gap 1, opp_overlap 993432 TTGCAGAAGTACAAA CGCGGG-GTACGCCC TTTG GGGAGTACACCCGCG TTTCATTGCCCGCTT TERM 855 993432 - 993464 + r 100 -15.6 -3.90856 | gap 1, opp_overlap 993432 TTGCAGAAGTACAAA CGCGGG-GTACGCCC TTTG GGGAGTACACCCGCG TTTCATTGCCCGCTT Bphy_4018 994762 - 993485 - | virulence factor family protein TERM 856 993512 - 993526 + g 74 -5 -4.56597 | opp_overlap 993524, overlap 993505 993513 GGCCTGCTTTTTCAA TGCATT GAG AATGCG TTTTTCAAGCGCGAC TERM 857 994740 - 994720 - G 72 -8.9 -4.02108 | overlap 994715 994721 GCGAGCACAACGAAA CGCTCGCCA GTG CGGCGAGCC GGTAAAACTTTTGCA Bphy_4019 997353 - 994759 - | hypothetical protein TERM 858 997508 - 997534 + r 81 -4.3 -5.15117 | opp_overlap 997508, overlap 997510 AAATTGCACAAAAGG TTGACATCGGG AACGA CCCGAAGGCGA TTTTTTGCAGTTTTC TERM 859 997860 - 997895 + r 76 -13.4 -2.76162 | opp_overlap 997865, overlap 997859 997865 CCGCTGCCCCAATGC GAAAAGCCCCAGTC ACGTTGCC GACCGGGGCTTTTC ATTTCAACTCGCGTA TERM 860 997890 - 997865 - R 82 -10.4 -4.19238 | opp_overlap 997860 997859 997865 GCCCCAATGCGAAAA GCCCCAGTCA CGTTGC CGACCGGGGC TTTTCATTTCAACTC TERM 861 997865 - 997890 + r 76 -7.5 -4.55798 | opp_overlap 997865, overlap 997860 997859 GCCCCAATGCGAAAA GCCCCAGTC ACGTTGCC GACCGGGGC TTTTCATTTCAACTC Bphy_4020 999473 - 997917 - | EmrB/QacA family drug resistance transporter TERM 862 998751 - 998727 - G 75 -12.1 -3.4758 | overlap 998721 CAGGAAGAACACGAA GCTGATGGCCG CGA CGACCGTCAGC GTCCAGATCACCGGC Bphy_4021 1000900 - 999545 - | secretion protein HlyD family protein TERM 863 1000748 - 1000797 + g 71 -10.5 -3.5936 | gap 1, overlap 1000754 1000757 1000767 GCGCGTATTCGGTTC CGCCGCGCCCGCAG-CCGGGGCCG CCG CCGCTTCGGGCTTCGCTTGCGGCG TTTGCGGCGTTTGCG TERM 864 1000754 - 1000784 + g 71 -12.4 -3.17571 | overlap 1000748 1000757 1000767 ATTCGGTTCCGCCGC GCCCGCAGCCGGGG CCG CCGCCGCTTCGGGC TTCGCTTGCGGCGTT Bphy_4022 1002443 - 1000935 - | RND efflux system outer membrane lipoprotein TERM 865 1001456 - 1001425 - G 71 -10.1 -3.56366 | opp_overlap 1001425 1001425 1001433, overlap 1001415 AAGAATCGGCCGAAA CCGAACGCGTCGA GTCCGA TCGCCGCGCTCAG GTTGATGTCGGGATA TERM 866 1002492 - 1002476 - R 89 -3.7 -5.63504 | overlap 1002478 AATCGGATAAAAAAA TGCTCAA TCG TTGAGGA ACTTGCGAAGCAGAC Bphy_4023 1002916 - 1002479 - | MarR family transcriptional regulator TERM 867 1003087 - 1003071 - R 75 -5.7 -4.70169 | opp_overlap 1003080 GGAGAGGCAAGAAAA GCGGCCG TTT CAGTCGC TGATGAATTTGCGCA Bphy_4024 1003517 - 1003080 - | MarR family transcriptional regulator Bphy_4025 1005203 - 1003605 - | NifA subfamily transcriptional regulator TERM 868 1004074 - 1004038 - G 86 -3.6 -5.14563 | gap 2, overlap 1004039 1004040 TCTTCGAGGAAAAAA CCCGCCAGCAGCAGCACG TCG CG-GCCGC-GCTCGCGCA ACGGCGGTACACGTA TERM 869 1004991 - 1004962 - G 71 -7.7 -4.13767 | gap 1 TCGCTCACGCGAAAA CGG-CGGCCGAGCG TAT CGCCCGTCAGGCCG TCGATCGCGAGCGGC TERM 870 1005097 - 1005059 - G 100 -10.9 -4.72986 | gap 1 CATCGCCAGGAAAAA GCGTGCGC-AGCGTCGTC AGAA GACGGCGATAGCGCTCGC GCTCCGGCAGGTCGC Bphy_4026 1005335 - 1006516 + | oxidoreductase FAD-binding subunit TERM 871 1006580 - 1006606 + T 100 -9.5 -5.37043 | ACCCGGTAGTACTTT GGAAGAGACGA TGTTC TGGTCTCTTCC TTTTTTATCTGGGCT Bphy_4027 1006928 - 1006638 - | muconolactone delta-isomerase TERM 872 1007025 - 1006991 - R 75 -10 -3.64703 | gap 1, overlap 1006996 CTCGCGCGACTCAAA CCGAA-GCGGCCGCC TGAAGC GGCGGCCGCATTCAC ACCACTATGCGTTCT TERM 873 1007019 - 1006996 - R 90 -16.7 -3.29324 | overlap 1006991 GCGACTCAAACCGAA GCGGCCGCC TGAAGC GGCGGCCGC ATTCACACCACTATG Bphy_4028 1007960 - 1007058 - | catechol 1,2-dioxygenase Bphy_4029 1009197 - 1008040 - | muconate and chloromuconate cycloisomerase Bphy_4030 1009288 - 1010178 + | LysR family transcriptional regulator Bphy_4031 1010644 - 1011084 + | hypothetical protein TERM 874 1011166 - 1011127 - T 74 -7.7 -4.19371 | opp_overlap 1011158, overlap 1011128 1011150 TAAAGCCTGAACAAA TCTTAAGCGCCATGGGC GGCAAA GCCCTTGGCGCGTTAGC CAACGATGCTGCGCG Bphy_4032 1012390 - 1011464 - | LysR family transcriptional regulator TERM 875 1012319 - 1012353 + g 72 -11.5 -3.53012 | opp_overlap 1012339 CGATACCGTGCTCTT TCG-CGCAGCCGCGGAG AAA CTCC-CGGCTTCGGCGA TTTCGACAAACAGCC Bphy_4033 1014127 - 1012634 - | permease for cytosine/purines uracil thiamine allantoin Bphy_4034 1014564 - 1014812 + | hypothetical protein Bphy_4035 1015773 - 1014823 - | hypothetical protein Bphy_4036 1017231 - 1015843 - | lysine/ornithine N-monooxygenase TERM 876 1017131 - 1017109 - G 80 -14.9 -3.14132 | CTGCCGTTCGATGAA GCAGTGCGC GGCCG GCGCACTGC CGCTCTCCGCGAGGC Bphy_4037 1018321 - 1017296 - | hypothetical protein Bphy_4038 1023290 - 1018311 - | amino acid adenylation domain-containing protein TERM 877 1019076 - 1019036 - G 71 -14 -2.71364 | gap 2, opp_overlap 1019028 GCACGGCGGCAATCA CGT-CGCGCGGCGAGGC-CG ATT CGCGCATCGCCGTGCGCACG ACGACTGCATTGATG Bphy_4039 1032976 - 1023302 - | amino acid adenylation domain-containing protein TERM 878 1026365 - 1026346 - G 85 -12.2 -4.07687 | AGCTGGTGCGCAAAA TGTCGTGC TGCG GCACGACA TGATCGAACGCGGCC TERM 879 1026589 - 1026608 + g 72 -12.8 -3.06831 | overlap 1026604 GCGGGAAGTCGGCGG GCGTGGCG CTGG CGCCGCGC TTCGATACGCGTTCG TERM 880 1027937 - 1027953 + g 71 -9.3 -3.75418 | opp_overlap 1027896 1027892, overlap 1027936 CGCATTGTCCGCAGG CGCGAGC GCT GCACGCG TTTCCGCTTTCTGTC TERM 881 1028231 - 1028248 + g 78 -12.7 -3.54543 | CTGCACGACAGGTTG CTGCGCG AGTT CGCGCAG TTTCGCGCGGTCGAT TERM 882 1029026 - 1029079 + g 72 -11.6 -3.53224 | overlap 1029029 GATCTTCAGCACGCC GACTGCGCGTTCGCGCATGGTCGC GGCGAA GCGGTCGGGATCGAACGCGCACTC TTTCGGCAGCAGGTG TERM 883 1030601 - 1030570 - G 93 -19.4 -3.15249 | opp_overlap 1030562 1030559 1030558 CATATTGCGCAGCAA GAGCGGGCAGCGCG GCGG CGCGCCGCTCGCTC AACGCTGCATAGGTT TERM 884 1031518 - 1031528 + g 80 -8.2 -4.4009 | GCTTCGACAAATGCT CGCG CAA CGCG TTTTCTCCAATGGCA TERM 885 1031953 - 1031934 - G 81 -13.6 -3.53012 | CGCGCTGTGCGCAAA CCGATCGG CGTA CCGATCGG CAACGACGCGCATGA TERM 886 1034642 - 1034606 - g 70 -11.5 -3.40403 | opp_overlap 1034606 1034607, overlap 1034589 1034607 1034621 CGCGCTCGATCACAA GGTGCGCGTGGAAAACG GCA CGTTCTCGACGCGCGCA TTGTCGACGGGTCAG TERM 887 1034641 - 1034607 - g 74 -15 -2.64099 | opp_overlap 1034607 1034606, overlap 1034589 1034606 1034621 GCGCTCGATCACAAG GTGCGCGTGGAAAACG GCA CGTTCTCGACGCGCGC ATTGTCGACGGGTCA TERM 888 1034607 - 1034641 + G 74 -15 -2.57564 | opp_overlap 1034589 1034606 1034607 1034621, overlap 1034606 GCGCTCGATCACAAG GTGCGCGTGGAAAACG GCA CGTTCTCGACGCGCGC ATTGTCGACGGGTCA Bphy_4040 1033185 - 1034978 + | cyclic peptide transporter TERM 889 1035041 - 1035013 - T 78 -10.9 -3.77219 | opp_overlap 1035013 ACGATGGAATGGAAA GCACCTCGGGACG ACA CCTCACGAGGCGC TTCTGATTCGAGCGA Bphy_4041 1036101 - 1035076 - | periplasmic binding protein Bphy_4042 1036892 - 1036098 - | ferric iron reductase Bphy_4043 1039021 - 1036895 - | transport system permease protein TERM 890 1037094 - 1037072 - G 77 -12.7 -3.35679 | overlap 1037041 CGCCGCGAGCCACAA GCGCACGCG ATGCG CGCGTGCAC CGAGCATGGCCGCAA TERM 891 1037378 - 1037394 + g 74 -10.1 -3.73224 | opp_overlap 1037378 CAGCCACACGACGAA GCGTGCG GGC TGCACGC TTTCCTGCACGATCA TERM 892 1037932 - 1037906 - G 77 -12.2 -3.5594 | opp_overlap 1037906, overlap 1037884 AATCCATGTGGCAAA GCGGCCGCGC GCCGATT GCGTGGCCGC TTCGCCGGCCTGCGC Bphy_4044 1039863 - 1039018 - | ABC transporter related Bphy_4045 1040891 - 1039860 - | taurine catabolism dioxygenase TauD/TfdA TERM 893 1040088 - 1040121 + g 75 -7.4 -4.27316 | gap 1, opp_overlap 1040108 ATCGGCTTCGAGCGG CGTGCCGT-CGCCGT AGTAC ACGTTGCGCGGCACG TTTTCGATTCCGACC Bphy_4046 1041263 - 1041030 - | MbtH domain-containing protein Bphy_4047 1042049 - 1041315 - | ECF subfamily RNA polymerase sigma-24 factor TERM 894 1041375 - 1041390 + g 74 -4.6 -4.58395 | overlap 1041377 AGCGCGTCCCGCCGT CTTCGC ATAC GCGACG TTTTTCGCGCCTGCG TERM 895 1041652 - 1041666 + g 79 -10 -4.08216 | AGGCCGTCTTCCTCG CACGTG TGC CACGTG TTTTCGAGGGACTGG TERM 896 1041856 - 1041832 - G 70 -11.3 -3.40371 | opp_overlap 1041831 1041832, overlap 1041833 CATCCGATGAACGAA CGCGCGAGCTG GAT CAGCGCGCGCC GGTTCTCGATCAGCA TERM 897 1041855 - 1041833 - G 74 -14.8 -2.63901 | opp_overlap 1041832 1041831, overlap 1041832 ATCCGATGAACGAAC GCGCGAGCTG GAT CAGCGCGCGC CGGTTCTCGATCAGC Bphy_4048 1043736 - 1042408 - | major facilitator transporter Bphy_4049 1044097 - 1043849 - | hypothetical protein Bphy_4050 1045850 - 1044138 - | monooxygenase FAD-binding Bphy_4051 1046853 - 1045894 - | beta-lactamase domain-containing protein Bphy_4052 1047102 - 1047947 + | IclR family transcriptional regulator Bphy_4053 1047944 - 1048753 + | IclR family transcriptional regulator TERM 898 1049061 - 1049029 - T 76 -4.6 -4.86731 | overlap 1049032 CCGCGGTAAAGAAAA GTAGGTGCCGCCCC GCACA GGGGCAACGCCAGC AAACCAGAAGCAAAG TERM 899 1049133 - 1049117 - T 89 -3.6 -5.52986 | overlap 1049119 1049120 ACGCCAGCAAAAAAA CAGCGA CCGCC TCGCAG ACGAAAAAAACCGGC Bphy_4054 1050012 - 1049149 - | RpiR family transcriptional regulator TERM 900 1049564 - 1049554 - G 70 -2.4 -4.60041 | ATCGAGCCTCAAAAA CCGC AAT GCCG CATCTTGTGCAACGA TERM 901 1049879 - 1049846 - G 79 -5.9 -4.62336 | gap 1, overlap 1049847 1049870 ACCGCACGGCAAAAA CGCGTCACGGACGGCT CCG AGACATCCGCG-CGCT GCGCCAGCTCGGTGA Bphy_4055 1051134 - 1050070 - | ABC transporter related TERM 902 1050708 - 1050675 - G 71 -12.3 -3.25073 | overlap 1050673 CGTCGAACAGGAACA GCGACGGCTCGCGCA CCAC CGCGCGCCCCATCGC GACGCGCTGGCGCTG TERM 903 1051050 - 1051101 + g 84 -12.5 -3.97636 | gap 3, opp_overlap 1051046 GCACGACGAACTCGC CGT--CGTCGATATGCAGGTCGATGC CGT GCA-CGACCTGCGTGTCGCCGTAACG TTTGTAGATTCCGCT Bphy_4056 1051957 - 1051184 - | short-chain dehydrogenase/reductase SDR TERM 904 1051747 - 1051769 + g 77 -13.4 -3.31144 | CGCGTGCAGCCACCG CCTGCGCGAC GCG GTCGCGCACG TTATCGGCGTCGGCC Bphy_4057 1052256 - 1053488 + | extracellular solute-binding protein TERM 905 1053526 - 1053552 + F 73 -10.9 -3.38072 | overlap 1053522 GGCGCAGCACCGGAA GCCGCATCG ATTCGACGC CGATGCGGC TTCATATTCGATAGA Bphy_4058 1053661 - 1054590 + | binding-protein-dependent transport systems inner membrane component Bphy_4059 1054587 - 1055432 + | binding-protein-dependent transport systems inner membrane component TERM 906 1055456 - 1055477 + F 75 -12.3 -3.28416 | gap 1, opp_overlap 1055456 1055458, overlap 1055458 TGTCTGTCATTCAAA GA-CCGCCGG TAA CCGGCGGCTC TTCGTCTGCCTCGTC TERM 907 1055477 - 1055456 - f 81 -12.3 -3.64703 | gap 1, opp_overlap 1055456 1055458, overlap 1055458 TGTCTGTCATTCAAA GA-CCGCCGG TAA CCGGCGGCTC TTCGTCTGCCTCGTC TERM 908 1055474 - 1055458 - f 87 -15.1 -3.40597 | opp_overlap 1055458 1055456, overlap 1055456 TCTGTCATTCAAAGA CCGCCGG TAA CCGGCGG CTCTTCGTCTGCCTC TERM 909 1055458 - 1055474 + F 81 -15.1 -2.52023 | opp_overlap 1055456 1055458, overlap 1055456 TCTGTCATTCAAAGA CCGCCGG TAA CCGGCGG CTCTTCGTCTGCCTC TERM 910 1055611 - 1055631 + F 74 -7.6 -4.12456 | opp_overlap 1055611 1055612, overlap 1055612 CGAAATTGCCGGAAA TTGGCCAT TTAAT ATGGCCAG TTTTGCGCCTAATCT TERM 911 1055891 - 1055929 + G 71 -10.8 -3.61398 | opp_overlap 1055890 1055887 1055886 1055925 GGCGGCGAAACGGAG CGGCGTCTCGCGACGGTC GTC GTATGGCGCGAAACGCCG TTCTTCACGGCACGC Bphy_4060 1055693 - 1056130 + | alkylhydroperoxidase TERM 912 1056203 - 1056233 + F 75 -8.4 -4.05788 | gap 2, overlap 1056203 1056207 GAGTCGTACGCATAT G-GC-CTGCAAGCG TATGC CGCTTGCAGTGCGC TTTCATTTCCGGCCA Bphy_4061 1056316 - 1057026 + | carboxymethylenebutenolidase Bphy_4062 1057851 - 1057255 - | 17 kDa surface antigen Bphy_4063 1058701 - 1057886 - | methyltransferase type 11 TERM 913 1058054 - 1058083 + g 74 -11.3 -3.5882 | gap 1, opp_overlap 1058045, overlap 1058079 GCAGAACGCCAACGC CGCGACCGCTGCCG ATT CGGC-GCAGCCGCG TTTCGCGATCGTCTC Bphy_4064 1060151 - 1058820 - | integral membrane sensor signal transduction histidine kinase Bphy_4065 1061310 - 1060411 - | LysR family transcriptional regulator TERM 914 1061036 - 1060984 - G 74 -10.6 -3.80014 | gap 2, opp_overlap 1060984, overlap 1060985 ACATTCAGCATGAAA CCGG-GCCAACGCATCGG-GCAGC CATGAAC GCTGCACCGACGCGATCGCACCGA TATTCACGCGCACGT Bphy_4066 1061425 - 1061862 + | glyoxalase/bleomycin resistance protein/dioxygenase Bphy_4067 1065048 - 1061947 - | chromosome segregation ATPase-like protein TERM 915 1062383 - 1062415 + g 72 -11.1 -3.53012 | overlap 1062372 1062405 CTTTGCGCGAGTTCG GCTGCGCGCTGTTCC GCA GCATCGGCGCGCTGC TTTGCGGCGAACGCG TERM 916 1065355 - 1065339 - g 91 -15.1 -3.85698 | CGGCTTGTTGATAAA GCGCCGG CAT CCGGCGC ACGAAGTGATCGTCG TERM 917 1067317 - 1067304 - g 78 -3.7 -4.80178 | CAGCAAGGAAGAAAA GCCCG TGTT CGGCC GCATGTTCCAGACGC TERM 918 1067637 - 1067601 - g 81 -11.7 -4.08216 | gap 3, overlap 1067576 GCAGGCCGCCGAAAA CGCGCGCCTGTCGC-CGT TCGA ACGCGCG-CA-GCGCGCG GAGGGGACCGTTTGA Bphy_4068 1065280 - 1067652 + | NADH:flavin oxidoreductase/NADH oxidase Bphy_4069 1067652 - 1068431 + | short-chain dehydrogenase/reductase SDR TERM 919 1068468 - 1068452 - g 79 -2.1 -5.04249 | overlap 1068453 1068454 GCTGCAAAAAAGAAA CCTGCCG ATT CAGCCGA AACCAAACCGGCGCG Bphy_4070 1068428 - 1068985 + | MarR family transcriptional regulator TERM 920 1069380 - 1069418 + G 73 -12.3 -3.31263 | gap 1, opp_overlap 1069352 GTCCGCAGCCGATCA TCGCTGCCGTCGACGGCG TATG CGCCGGCGCGGGC-GCGA TTCTCGCGATGGCGT Bphy_4071 1069013 - 1069864 + | enoyl-CoA hydratase/isomerase TERM 921 1070479 - 1070533 + G 72 -11.6 -3.55444 | gap 3 CCGATACGCCGGGCC TGCAGATCGCG-GAGCGCAT-CGACGT GATC GCGCCGCATCCGCTCGCGCG-TCTGCA TTTCGACAGTGCGCG Bphy_4072 1069866 - 1071071 + | acyl-CoA dehydrogenase domain-containing protein Bphy_4073 1071068 - 1071511 + | thioesterase superfamily protein Bphy_4074 1071508 - 1071906 + | endoribonuclease L-PSP Bphy_4075 1071970 - 1073607 + | AMP-dependent synthetase and ligase Bphy_4076 1074033 - 1075346 + | major facilitator transporter Bphy_4077 1075459 - 1075995 + | transcription activator effector binding TERM 922 1076041 - 1075992 - T 72 -4.8 -4.58395 | gap 1, opp_overlap 1076034, overlap 1075997 GCTACCGCTCAAAAA CTGAACCGCGCAGCGG-GCAGGC GTTCA GCCTGTTCCGCCGATGGGTGCAG CTTCGACTTCGAACG Bphy_4078 1076630 - 1076016 - | flavin reductase domain-containing protein TERM 923 1076738 - 1076714 - R 100 -15 -5.00616 | gap 1, overlap 1076699 1076716 CGCGCGCGTAAAAAA GCG-GCGGCGC TTTT GCGCCGCCCGC GGATCCGCATGAGTG TERM 924 1076735 - 1076716 - R 86 -16.4 -2.75708 | overlap 1076714 1076699 CGCGCGTAAAAAAGC GGCGGCGC TTTT GCGCCGCC CGCGGATCCGCATGA Bphy_4079 1077095 - 1076763 - | hypothetical protein Bphy_4080 1078561 - 1077347 - | hypothetical protein TERM 925 1077975 - 1078031 + g 88 -9.4 -4.66833 | gap 2, opp_overlap 1077962, overlap 1077962 AACGCGACGATCCTG GCGCGCGCTTCGTCAGTGATGGGCAAGG CCT TCTTGC-CGTCGACG-CGCAGCGTGCGC TTTTTCCCCTTCAGC TERM 926 1079417 - 1079435 + G 72 -11.6 -3.55761 | opp_overlap 1079415 CGTCGATAGCGAATG GCCGGCGC TGC GCGCGGGC TTTGCAGAATGGCTG Bphy_4081 1078806 - 1079525 + | GCN5-related N-acetyltransferase Bphy_4082 1080434 - 1079910 - | GCN5-related N-acetyltransferase Bphy_4083 1081010 - 1080534 - | 3-demethylubiquinone-9 3-methyltransferase TERM 927 1081052 - 1081082 + r 87 -4 -5.44638 | gap 2, overlap 1081056 AGCGGGCGCATGGAC TGCACGACGGGCAG CAGCC CCGCCCGT-G-GCA TTTTGTTTTTGTTAT Bphy_4084 1081579 - 1081094 - | glyoxalase/bleomycin resistance protein/dioxygenase Bphy_4085 1081964 - 1081731 - | hypothetical protein TERM 928 1081932 - 1081910 - G 74 -11.3 -3.57144 | gap 1, opp_overlap 1081908 GCGTCGATGCGCAAA GCGCG-GCTG CCAG CAGCGCGCGC AACTTCATAGCTTTC Bphy_4086 1083191 - 1082025 - | hypothetical protein Bphy_4087 1084696 - 1083194 - | hypothetical protein TERM 929 1083828 - 1083883 + g 70 -11.7 -3.33261 | gap 1, opp_overlap 1083860 ATGATGGTCCGCGTG CCCGGC-TCGTGCAGTTGCGCGCG GAAGACGAA CGCGCCCGGCGGCGCGTTGCCGGG TTGTGGCCCTTGCGC TERM 930 1083875 - 1083860 - G 73 -11.8 -3.36273 | opp_overlap 1083828 CGCGCGGAAGACGAA CGCGCC CGGC GGCGCG TTGCCGGGTTGTGGC TERM 931 1084203 - 1084216 + g 73 -9.5 -3.85698 | opp_overlap 1084194 AACGCACCGGCGTAT GGCGC GACG GCGCC TTTATCGACCGACAC TERM 932 1084430 - 1084444 + g 81 -11.4 -4.08767 | GCTGCTCGGGCTCGC GCCGCT TGC AGCGGC TTTTGCAGCACTCGC Bphy_4088 1085338 - 1084811 - | putative membrane-associated protein TERM 933 1085230 - 1085198 - G 70 -11.2 -3.36823 | gap 1, overlap 1085193 CGCGGCAAAACGCAA CGCACG-CGGCTGCG CGGC CGCAGTCGTCGGGCG GCCGTGCCCGGCGAA Bphy_4089 1085787 - 1085335 - | hypothetical protein Bphy_4090 1086398 - 1085784 - | ECF subfamily RNA polymerase sigma-24 factor TERM 934 1085957 - 1086008 + g 73 -12.1 -3.37354 | gap 1 GCGCCTCGCGCTGGC GCGCGGGCAGCGCGGCAAGCGCGT CCCGC ACACGCGCGTCGCGC-GACTGCGC TTCTAGCTGCATGTC Bphy_4091 1086835 - 1087263 + | hypothetical protein Bphy_4092 1087267 - 1088070 + | AraC family transcriptional regulator Bphy_4093 1088199 - 1088492 + | hypothetical protein TERM 935 1088498 - 1088540 + T 93 -17.7 -3.19463 | opp_overlap 1088493 1088494, overlap 1088493 CGCGGAATAAGCGCG CCTGGTCGCGCTTTGCTGC CCATC GCAGCAAGGCGCGTCCGCG TTCGTGCCTAATAGC Bphy_4094 1089285 - 1088548 - | hypothetical protein TERM 936 1089087 - 1089063 - G 71 -7.8 -4.13767 | gap 1 GCGGCCATTTCAAAA GCTTGCG-CGC TTCG GCGTCGCACGC ACGATATCCCGTCGA Bphy_4095 1089414 - 1090370 + | alcohol dehydrogenase Bphy_4096 1090402 - 1090578 + | hypothetical protein TERM 937 1090582 - 1090633 + T 78 -11.5 -3.66178 | opp_overlap 1090631 GTGACGAGCTGACGT TACTGCATGCGTGCGTGCGCG CCGCTCATTT CGCGCGCGCGCTCAAGCAGCA TTTCGCGTTCCCGCG Bphy_4097 1091885 - 1090581 - | RNA polymerase ECF-subfamily sigma factor TERM 938 1091578 - 1091521 - G 100 -22.7 -2.79302 | overlap 1091507 1091510 ACGAGCCGCAGCAGA TCGTCGCCGATGTCGTCGGCGCGCGCG GCGT CGAGCGCGTCGACGAAATCGGGCACGA TATGGGCCTCGCGTG Bphy_4098 1092304 - 1091885 - | glyoxalase/bleomycin resistance protein/dioxygenase TERM 939 1092087 - 1092119 + g 74 -2.5 -4.72986 | overlap 1092085 1092089 1092090 GAGAGGCAGATCAGC GCTTCTGTGCTCTCC TTC GGATTGCACAGCGTC TTTTTCGTGAAGGTC Bphy_4099 1092767 - 1092354 - | DGPFAETKE family protein Bphy_4100 1093240 - 1092884 - | DGPFAETKE family protein Bphy_4101 1094056 - 1095174 + | porin TERM 940 1095252 - 1095295 + T 100 -18.2 -3.14564 | overlap 1095246 1095256 CGGGCCCGCGAGGCG ACCACGACGCCCCTACGTTC TTCA GAACGTAGGGGCGTCGTCCA TTGATAACGCCGTAG TERM 941 1095256 - 1095291 + T 100 -27.8 -2.56596 | overlap 1095246 1095252 CCCGCGAGGCGACCA CGACGCCCCTACGTTC TTCA GAACGTAGGGGCGTCG TCCATTGATAACGCC Bphy_4102 1095795 - 1095331 - | activator of Hsp90 ATPase 1 family protein TERM 942 1095672 - 1095648 - G 70 -14.3 -2.60194 | overlap 1095647 ATTCGTGGAAGGAAT TGGTGAAGCCC TTG GGGCCCCACCA GTGCGCGAGATGCGC TERM 943 1095967 - 1095951 - R 79 -13.7 -3.08015 | overlap 1095940 TCAATCACGGCAAGA CGCAGCG CAA CGCTGCG TCAAGCGTCAGATGG Bphy_4103 1097099 - 1095975 - | Rieske (2Fe-2S) domain-containing protein TERM 944 1096938 - 1096971 + g 76 -13.9 -3.17075 | gap 1, opp_overlap 1096947 1096948 CAGCACGATCGGCTC GC-CGGCAAAGCGCAC GGC GTGCGTCTTGCCGCGC TTCACTTCGCGCGAC TERM 945 1097311 - 1097282 - R 95 -13.5 -4.21194 | opp_overlap 1097286, overlap 1097286 CCGTATCAGGCAAAA CGAAGGGCGGCGC CGAA GCGCCGCCCTTAT GTTCGGTGCGACGGC TERM 946 1097307 - 1097286 - R 100 -18.7 -3.70007 | opp_overlap 1097286, overlap 1097282 ATCAGGCAAAACGAA GGGCGGCGC CGAA GCGCCGCCC TTATGTTCGGTGCGA TERM 947 1097286 - 1097307 + r 100 -18.7 -3.68988 | opp_overlap 1097286 1097282 ATCAGGCAAAACGAA GGGCGGCGC CGAA GCGCCGCCC TTATGTTCGGTGCGA Bphy_4104 1098907 - 1097369 - | glycosyl transferase family protein TERM 948 1099292 - 1099241 - H 80 -9.3 -4.21194 | gap 2, overlap 1099242 1099285 TCCCACGACGGAAAA CTCGCGCG-GCAACGGCG-GCGGCC GGTG GGACGCGCGCCACAGCACGCGCAAC AGCGCGAGGCCGAGC TERM 949 1099291 - 1099242 - H 76 -12.8 -3.12395 | gap 2, overlap 1099241 1099285 CCCACGACGGAAAAC TCGCGCG-GCAACGGCG-GCGGCC GGTG GGACGCGCGCCACAGCACGCGCAA CAGCGCGAGGCCGAG TERM 950 1099647 - 1099633 - g 71 -9.2 -3.71284 | opp_overlap 1099633 1099632 GTCTTATCAACAGAA CGACCG ACC CGGCCG CTTTATTCCTTCAAT Bphy_4106 1099587 - 1099874 + | hypothetical protein Bphy_4107 1100008 - 1100988 + | glutathione S-transferase domain-containing protein Bphy_4108 1101075 - 1101359 + | hypothetical protein Bphy_4109 1101692 - 1101369 - | thioredoxin domain-containing protein Bphy_4110 1102905 - 1101781 - | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 951 1102271 - 1102223 - G 74 -10.2 -3.73775 | gap 2, opp_overlap 1102230 1102264 GTCATGCCCATGAAA GCGTG--GCTCGCCGCTGCCGCGA CGA TTGCGTCGGCGGCGATCTGCACGC CTCCGTCCGTGCCGT TERM 952 1102698 - 1102674 - G 71 -12.2 -3.2218 | gap 1, opp_overlap 1102673 1102674, overlap 1102677 TCGAACACGGACCAA CGACGACGACC AGCC GGTCGTCG-CG ATCGTGCAGGATGTC TERM 953 1102696 - 1102677 - G 73 -13.6 -2.79842 | opp_overlap 1102674 1102673, overlap 1102674 AACACGGACCAACGA CGACGACC AGCC GGTCGTCG CGATCGTGCAGGATG Bphy_4111 1103556 - 1103020 - | activator of Hsp90 ATPase 1 family protein TERM 954 1103486 - 1103465 - G 76 -5.7 -4.46926 | opp_overlap 1103440 GATTCGATCAGAAAA GCCCACACG CGCT CGATTGGGC CGGGCAGCAGACGTT Bphy_4112 1105040 - 1103553 - | transcriptional regulator TERM 955 1104712 - 1104757 + g 72 -8.2 -3.97368 | gap 2, opp_overlap 1104672 1104673, overlap 1104708 CGGTCGTGCGGCAAG CCGGCGACGCGCCGC--GACAG GCGG CTGACGGGCGGAGCGTTGGCGG TTTGTGCATTCGCCG Bphy_4113 1105143 - 1105619 + | GCN5-related N-acetyltransferase Bphy_4114 1106197 - 1105616 - | hypothetical protein Bphy_4115 1107560 - 1106223 - | Fe-S oxidoreductase-like protein TERM 956 1107760 - 1107737 - R 77 -13.8 -2.88544 | opp_overlap 1107755 CGGTACCGCGACAGA TGCGCCGGCT GCCC AGCCGGCGCC TGGACTCAATCGACC Bphy_4116 1108188 - 1107766 - | rubrerythrin Bphy_4117 1108416 - 1108775 + | hypothetical protein TERM 957 1108909 - 1108881 - f 81 -8.9 -4.36914 | gap 1, opp_overlap 1108880 1108881 CGCTCCTGCATAAAA CGCCATGCGCGC TGCAAT GCG-GCATGACG CTTTTCCAAACCGTC Bphy_4118 1109015 - 1109764 + | DNA/RNA non-specific endonuclease Bphy_4119 1109757 - 1110014 + | hypothetical protein TERM 958 1111045 - 1111003 - g 71 -9.3 -3.76952 | gap 3, opp_overlap 1110997 1111020 GCGATCGAAGCGAAA GCCGGGCCGACGC-ATGTCG ATGCCG CG-CATCGCGTCA-CCCGGC ATCGCTTCTGAATTC Bphy_4121 1110511 - 1111056 + | hypothetical protein Bphy_4122 1111949 - 1111059 - | transporter DMT superfamily protein Bphy_4123 1112329 - 1111946 - | hypothetical protein TERM 959 1113011 - 1113001 - g 70 -2.4 -4.60041 | opp_overlap 1112979 ACCGACCTCGAAAAA CCGG TGC CCGT GCTGATCTCCGCGTA Bphy_4124 1112398 - 1113378 + | hypothetical protein Bphy_4125 1113770 - 1113474 - | acylphosphatase Bphy_4126 1113958 - 1114968 + | hopanoid-associated sugar epimerase Bphy_4127 1115086 - 1115634 + | hypothetical protein Bphy_4128 1116358 - 1115687 - | lytic transglycosylase catalytic TERM 960 1116113 - 1116124 + g 78 -3.6 -4.8622 | CCCCGTCGCGCCGTT GCCG CCCT TGGC TTTTTCCTTGAAGCG Bphy_4129 1117533 - 1116355 - | hopene-associated glycosyltransferase HpnB TERM 961 1118199 - 1118162 - g 100 -14.9 -4.57341 | gap 1, overlap 1118163 1118192 AATCTTCGCCAAAAA GGCGCGCGCTTCGTCGAG GAG CTCGACGAAGTGC-CGCA GGGCGCAGTTGCCAT TERM 962 1118198 - 1118163 - g 93 -18.4 -3.33922 | gap 1, overlap 1118162 1118192 ATCTTCGCCAAAAAG GCGCGCGCTTCGTCGAG GAG CTCGACGAAGTGC-CGC AGGGCGCAGTTGCCA Bphy_4130 1118006 - 1118950 + | hydroxymethylbutenyl pyrophosphate reductase Bphy_4131 1118973 - 1120118 + | hopanoid biosynthesis associated radical SAM protein HpnH TERM 963 1120136 - 1120174 + T 100 -19.8 -4.08692 | opp_overlap 1120142, overlap 1120142 GGCATCGACGCCGCA TGAAAAGAGCGCAACGGT TTA GCCGTTGCGCTCTTTTTG TTTTGGCGCCGCTTG TERM 964 1120168 - 1120142 - T 100 -18.1 -4.2558 | opp_overlap 1120142 1120136 GACGCCGCATGAAAA GAGCGCAACGG TTTAG CCGTTGCGCTC TTTTTGTTTTGGCGC TERM 965 1120142 - 1120168 + T 100 -18.8 -5.45802 | opp_overlap 1120142, overlap 1120136 GACGCCGCATGAAAA GAGCGCAACGGT TTA GCCGTTGCGCTC TTTTTGTTTTGGCGC TERM 966 1120233 - 1120196 - T 72 -4.7 -4.56597 | gap 1, opp_overlap 1120222, overlap 1120214 1120216 1120219 CGCCGCTTGCAAAAA GCG-GCAACACGCGTAGA AGA TCAGCCCGCGCTGCGCGC GTTGTGCTCGGTCAG Bphy_4132 1120821 - 1120216 - | toluene tolerance family protein TERM 967 1120791 - 1120769 - G 86 -14.8 -3.53012 | overlap 1120785 GCGGTTTGTGCGAAA GCCGCGGTGG AAA CCACGGCGGC TGCCAGAAAAGCAGA TERM 968 1120879 - 1120849 - H 76 -12.5 -3.10343 | ACAGTTAGGAGTGAA GCCGCGCGGGACA AGCCA CATCCCGCGCGGT TACGGGGTCAGTATA TERM 969 1120917 - 1120955 + H 83 -13.8 -3.34962 | opp_overlap 1120908 1120909, overlap 1120922 TGGAAAGCTGCACTG GTTCACCGACGCGACCGT GCG ACGGCTGCGTCGGTATAC TTGTGCCCTCTACCA TERM 970 1120922 - 1120950 + H 88 -16.7 -2.9675 | opp_overlap 1120908 1120909, overlap 1120917 AGCTGCACTGGTTCA CCGACGCGACCGT GCG ACGGCTGCGTCGG TATACTTGTGCCCTC TERM 971 1121650 - 1121637 - g 71 -3.7 -4.58663 | opp_overlap 1121637 1121638, overlap 1121626 1121638 AGGACGCGGCAAAAA TGCCC GCGA GGGCG TTCATCGTCGTGCAA TERM 972 1122292 - 1122316 + G 86 -14.3 -3.78329 | CAAGGTCTTCAATCC GCCCGGCGA AGCGGAG TCGCCGGGC TTTACGTTCCTCGCG Bphy_4133 1121006 - 1123618 + | hopanoid biosynthesis associated RND transporter like protein HpnN TERM 973 1124361 - 1124344 - g 73 -14.1 -2.82635 | ACGGCGACGACGATA CGGGCGC GGAA GCGCCCG CGGGCGCGTCGGGCA TERM 974 1124564 - 1124522 - g 75 -14.8 -2.71263 | overlap 1124526 AAGCCTGCCGAACTA CGAAGATCCGGGCGAAGGCG CGG CGCCGTCGCCTGCATCTCCA GGTGCACCGGCAACG TERM 975 1124560 - 1124526 - g 78 -14.2 -3.27298 | overlap 1124522 CTGCCGAACTACGAA GATCCGGGCGAAGGCG CGG CGCCGTCGCCTGCATC TCCAGGTGCACCGGC Bphy_4134 1123629 - 1124639 + | VacJ family lipoprotein TERM 976 1124675 - 1124711 + T 100 -25.2 -4.7254 | opp_overlap 1124675 AAGCGCAAATAAAAA GCCCCGGCTGGTCTCG CGTCT CGCGACCAGCCGGGGC TTTTTCATGCAGCCT TERM 977 1124711 - 1124675 - T 100 -25.2 -5.29846 | opp_overlap 1124675 AAGCGCAAATAAAAA GCCCCGGCTGGTCTCG CGTCT CGCGACCAGCCGGGGC TTTTTCATGCAGCCT Bphy_4135 1125231 - 1124749 - | thioesterase superfamily protein Bphy_4136 1126082 - 1125369 - | hypothetical protein Bphy_4137 1128115 - 1126082 - | squalene-hopene cyclase TERM 978 1127020 - 1127071 + g 73 -13.6 -2.87132 | gap 1, overlap 1127029 GGCCGCGTTCGGCGG CTTCTT-CGGCGCGCGCGTCGCCCG TTT CGAGCAGCGCGTGCGCCGCAAGGGA TGTGTCCCACACGGG TERM 979 1127108 - 1127134 + g 77 -5 -4.66609 | opp_overlap 1127108, overlap 1127110 ACACGGCTGGCAATA CGCCTCGTCTTC GTG GACGACGAGCAG TTTTTCGATCGACTC Bphy_4138 1129389 - 1128112 - | squalene-associated FAD-dependent desaturase TERM 980 1128269 - 1128308 + g 70 -14.2 -2.53911 | opp_overlap 1128290 1128291 GGGCGGCGCATCTCC TCGTCGGGCTGCGCGGCG AAAG TGGCGCGCGGCTCGACAA TCAATTGCCACTTGA Bphy_4139 1130261 - 1129389 - | squalene synthase HpnD TERM 981 1130179 - 1130169 - G 74 -4.6 -4.53303 | CATCGCGAGATAAAA CGAG CTG CCCG AACTTGCGGCGGCTG Bphy_4140 1130786 - 1131208 + | hypothetical protein TERM 982 1131263 - 1131205 - T 72 -9.5 -3.75024 | gap 1, opp_overlap 1131219, overlap 1131208 1131210 GTGGATGACGAAGAA GTAGATCCCGGGCGCTGGACGCATTGCC GTAC GGCAACGCGTCCAATGTCCTGAGCCT-C AGATGAACGCAACCG TERM 983 1131261 - 1131208 - T 71 -12.3 -2.96963 | opp_overlap 1131219, overlap 1131205 1131210 GATGACGAAGAAGTA GATCCCGGGCGCTGGACGCATTGCC GTAC GGCAACGCGTCCAATGTCCTGAGCC TCAGATGAACGCAAC TERM 984 1131219 - 1131250 + T 73 -13 -2.79183 | opp_overlap 1131210 1131208 1131205 AGTAGATCCCGGGCG CTGGACGCATTGCC GTAC GGCAACGCGTCCAA TGTCCTGAGCCTCAG TERM 985 1131288 - 1131271 - T 71 -11.3 -3.26471 | TGAGCCTCAGATGAA CGCAACC GACC GGTTGCG CCCTTGCCGCTTCGC Bphy_4141 1132200 - 1131262 - | diguanylate cyclase with PAS/PAC sensor Bphy_4142 1132820 - 1132197 - | CheC, inhibitor of MCP methylation Bphy_4143 1133181 - 1132813 - | response regulator receiver protein TERM 986 1133757 - 1133796 + H 100 -9.8 -5.53288 | opp_overlap 1133761, overlap 1133761 GCAAAGTCGTATGAC TAAAGCGCCGAGCCCGCG CAGT TGCGGACGCGGCGCTTCC TTTTTTTGCATTGCG TERM 987 1133761 - 1133792 + H 100 -15 -4.04789 | opp_overlap 1133761, overlap 1133757 AGTCGTATGACTAAA GCGCCGAGCCCGCG CAGT TGCGGACGCGGCGC TTCCTTTTTTTGCAT TERM 988 1133792 - 1133761 - H 100 -16.5 -3.78953 | opp_overlap 1133761 1133757 AGTCGTATGACTAAA GCGCCGAGCCCGC GCAGTT GCGGACGCGGCGC TTCCTTTTTTTGCAT Bphy_4144 1133886 - 1136168 + | integral membrane sensor hybrid histidine kinase TERM 989 1137139 - 1137096 - g 83 -15.2 -3.28712 | gap 1, overlap 1137061 GCCGGCGGGCGACAA GCGCGGCGGACGCGCCTGCCG CTG CGGCAATCGCGTCAGC-GGGC ATCGCGGGTTCAGGC Bphy_4145 1136384 - 1137493 + | hypothetical protein TERM 990 1137508 - 1137531 + T 84 -13.1 -3.7108 | GCTTCGGCTGGCGAG GCGGCGCCT GACATG GGGCGCCGC TTTGGGTATCGACCT Bphy_4146 1138104 - 1137553 - | NADPH-dependent FMN reductase Bphy_4147 1138282 - 1138662 + | hypothetical protein TERM 991 1138676 - 1138704 + T 95 -19 -2.62983 | opp_overlap 1138682, overlap 1138674 1138678 1138682 GAGCATGCGGTCTGC GACAAAGGGCGC TTGAT GCGCCCTTTGTC TCGTCTAGCGGTCGG TERM 992 1138678 - 1138702 + T 86 -15.8 -2.85668 | opp_overlap 1138682, overlap 1138674 1138676 1138682 GCATGCGGTCTGCGA CAAAGGGCGC TTGAT GCGCCCTTTG TCTCGTCTAGCGGTC TERM 993 1138698 - 1138682 - T 77 -10.8 -3.85698 | opp_overlap 1138674 1138682 1138678 1138676 GCGGTCTGCGACAAA GGGCGC TTGAT GCGCCC TTTGTCTCGTCTAGC TERM 994 1138682 - 1138698 + T 82 -10.8 -4.11404 | opp_overlap 1138682, overlap 1138674 1138678 1138676 GCGGTCTGCGACAAA GGGCGC TTGAT GCGCCC TTTGTCTCGTCTAGC Bphy_4148 1138999 - 1138709 - | hypothetical protein TERM 995 1140119 - 1140104 - g 70 -4.6 -4.4261 | overlap 1140098 GGCTGAACAGCAAAA GATCGC CGAT GCGTTC ACTGAGCTTCGCATC Bphy_4149 1139220 - 1140185 + | aliphatic sulfonate ABC transporter periplasmic ligand-binding protein TERM 996 1140201 - 1140233 + T 76 -12 -3.42257 | gap 1, overlap 1140194 1140202 GCGCCCGTTTGATAG TGCGCGCG-TGACGG TTAC CCGTTGTCGCGCGCG TTGCTCTATTTCGCC TERM 997 1140202 - 1140232 + T 74 -13.3 -2.64872 | gap 1, overlap 1140201 1140194 CGCCCGTTTGATAGT GCGCGCG-TGACGG TTAC CCGTTGTCGCGCGC GTTGCTCTATTTCGC Bphy_4150 1140610 - 1140239 - | arsenate reductase Bphy_4151 1141207 - 1141869 + | cobyrinic acid ac-diamide synthase TERM 998 1142961 - 1142918 - g 80 -11.8 -3.78351 | gap 1 AGAAACGCGATGAAA TTCTCAGG-CAGATCGAGCAG ATG CTGTCCGATCCGTCCTGAGGA GCAGAAAAATGGCGC Bphy_4152 1141894 - 1142958 + | parB-like partition protein TERM 999 1142994 - 1142971 - T 83 -5.8 -4.93296 | opp_overlap 1142973, overlap 1142972 1142973 TGAGGAGCAGAAAAA TGGCGCGCCA GTTG CGGCGCGCTT CATCGAAATCAGGCA TERM 1000 1142973 - 1142992 + T 73 -12.1 -3.15544 | opp_overlap 1142972 1142971 1142973 AGGAGCAGAAAAATG GCGCGCC AGTTGC GGCGCGC TTCATCGAAATCAGG TERM 1001 1142992 - 1142973 - T 73 -12.8 -2.7243 | opp_overlap 1142973, overlap 1142972 1142971 AGGAGCAGAAAAATG GCGCGCCA GTTG CGGCGCGC TTCATCGAAATCAGG Bphy_4153 1144352 - 1143003 - | putative replication protein Bphy_4154 1144673 - 1145017 + | hypothetical protein TERM 1002 1145100 - 1145083 - f 80 -2.7 -5.24551 | GCAAACGAACAAAAA GTCATGA AAAA TAATGAC TTAGCGGATAACAAC Bphy_4155 1146284 - 1147489 + | hypothetical protein Bphy_4156 1148636 - 1147572 - | integrase family protein TERM 1003 1148773 - 1148716 - R 75 -9.7 -3.87815 | gap 1, overlap 1148717 CTTTACGCGCATAAA CTCGCGCCGCTCGCCGGAACGCACGAGG CAA CCGCAGGCATTCCG-CTAGCCGCGCCAA GCACGTCCTGCACCG Bphy_4157 1149159 - 1148761 - | hypothetical protein Bphy_4158 1149856 - 1149242 - | XRE family transcriptional regulator TERM 1004 1149922 - 1149911 - H 77 -2.2 -5.03314 | TTTAGTTCGAAAAAA CGAA AATT TCCG ATTAAACCTGAGCCG Bphy_4159 1150000 - 1151199 + | 2-amino-3-ketobutyrate coenzyme A ligase Bphy_4160 1151218 - 1152246 + | L-threonine 3-dehydrogenase Bphy_4161 1152900 - 1152265 - | YceI family protein Bphy_4162 1153018 - 1153650 + | TetR family transcriptional regulator Bphy_4163 1153673 - 1154149 + | hypothetical protein Bphy_4164 1154363 - 1154890 + | hypothetical protein TERM 1005 1156028 - 1155974 - g 78 -1