TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.670506 %AT, 3300379 nt, 15955 terms. Intergenic: 0.721026 %AT, H2T: 549383 nt, 4630 terms; T2T: 101569 nt, 2271 terms; H2H: 145471 nt, 2859 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|148245107|ref|NC_009466.1| Clostridium kluyveri DSM 555 plasmid pCKL555A, complete sequence (length 59182) CKL_4000 2997 - 391 - | DNA primase related protein TERM 1 2896 - 2910 + g 72 -2.8 -5.40279 | AGAAGGATTTTTATC TGGATG GAA CATGCA TTTTATTTTATTTTG CKL_4001 3603 - 3013 - | hypothetical protein CKL_4002 3999 - 3604 - | hypothetical protein CKL_4003 4605 - 4012 - | hypothetical protein CKL_4004 4852 - 4586 - | hypothetical protein CKL_4005 5540 - 5037 - | hypothetical protein TERM 2 5664 - 5697 + r 100 -14.8 -5.06816 | opp_overlap 5673, overlap 5665 ATAATTACTTCTCAT TTCATACCAGGGAT ATTTAA ATCCCTGGTATGAG TTTTTATTACAAAGT TERM 3 5665 - 5696 + r 100 -16.1 -3.63367 | opp_overlap 5673, overlap 5664 TAATTACTTCTCATT TCATACCAGGGAT ATTTAA ATCCCTGGTATGA GTTTTTATTACAAAG CKL_4006 5984 - 5727 - | hypothetical protein TERM 4 6065 - 6076 + r 71 -4.4 -4.89852 | TCTTGCTTTGTTATC TGGA TTTT TCCA TTTTTATCAATATAC CKL_4007 6784 - 6356 - | hypothetical protein CKL_4008 7334 - 6822 - | hypothetical protein CKL_4009 7648 - 7475 - | hypothetical protein CKL_4010 7818 - 7657 - | hypothetical protein CKL_4011 8040 - 7873 - | hypothetical protein CKL_4012 8372 - 8052 - | hypothetical protein CKL_4013 8800 - 8489 - | single-strand DNA-binding protein CKL_4014 9300 - 8797 - | hypothetical protein CKL_4015 13092 - 9316 - | SbcCD related DNA repair protein CKL_4016 13244 - 13089 - | hypothetical protein CKL_4017 13525 - 13250 - | hypothetical protein TERM 5 13535 - 13548 + r 80 -8.1 -4.19817 | ACACATCACTTATTA CCTGC TTTC GCAGG TTTTGAATCCCTGGC CKL_4018 14442 - 13525 - | hypothetical protein TERM 6 13780 - 13791 + g 71 -3 -5.24129 | TGGAGCACTCAACAT TTTG CTTC CAAA TTTTTTCTCAAACAA CKL_4019 14698 - 14462 - | hypothetical protein TERM 7 14764 - 14780 + r 100 -6.6 -5.95539 | GGGAATTTTATTTTG GTCCTT TCTAC AAGGAC TTTTTTTATTTACCA CKL_4020 15013 - 14786 - | hypothetical protein CKL_4021 15215 - 14985 - | hypothetical protein CKL_4022 15616 - 15212 - | hypothetical protein CKL_4023 16136 - 15606 - | phage related protein CKL_4024 16390 - 16139 - | hypothetical protein CKL_4025 16573 - 16391 - | hypothetical protein CKL_4026 17038 - 16574 - | hypothetical protein CKL_4027 17186 - 17040 - | hypothetical protein CKL_4028 17395 - 17183 - | hypothetical protein CKL_4029 18200 - 17409 - | hypothetical protein TERM 8 18408 - 18439 + r 71 -8.8 -2.88054 | overlap 18407 AAGACCTCCTTTCTC CCACCCAAACAA ATTCATGC TTGCTTGGGTGG CTTTAACTTATGCGC CKL_4030 18593 - 18447 - | hypothetical protein CKL_4031 18760 - 19119 + | transcriptional regulator TERM 9 19135 - 19113 - f 100 -12.2 -5.03145 | opp_overlap 19113 GAATGGTTTAAAAAA TAAGTAGGAA TGC TTCCTACTTA TTTTTCATTGTAAAA TERM 10 19113 - 19135 + F 100 -12.2 -4.93365 | opp_overlap 19113 GAATGGTTTAAAAAA TAAGTAGGAA TGC TTCCTACTTA TTTTTCATTGTAAAA CKL_4032 19518 - 19769 + | transcriptional regulator TERM 11 19828 - 19781 - f 100 -11.7 -4.79657 | opp_overlap 19778 19777 19781 19788, overlap 19820 ATAACATGAATAAAA TTGCAAATATACTATCTTTTA AAAAAA TATTAGATAGTATATTTGCAA TAACTTATTTTCAAT TERM 12 19781 - 19828 + F 93 -11.7 -2.76267 | opp_overlap 19781 19820, overlap 19778 19777 19788 ATAACATGAATAAAA TTGCAAATATACTATCTTTTA AAAAAA TATTAGATAGTATATTTGCAA TAACTTATTTTCAAT CKL_4033 19891 - 20229 + | transcriptional regulator TERM 13 20293 - 20309 + F 70 -5.3 -4.60255 | opp_overlap 20295 CCTTTTATCCTTTAA TATTATA AAT TATAATA TTTTTAGAGAATTGT CKL_4034 20363 - 21688 + | DNA polymerase III subunit epsilon CKL_4035 22617 - 21742 - | phage related replication protein TERM 14 22205 - 22231 + g 83 -5.8 -5.25976 | opp_overlap 22213, overlap 22190 CCGGAAGTGGATTCT TCCATATACGGA TTT TCCGGAAGTGGA TTTATTTTTTTGCTT TERM 15 22759 - 22772 + r 70 -6.7 -3.95836 | opp_overlap 22757 22759 TAGAATAGATATATA GAAGG TTAA CCTTC TTGTGTTTTAGAAGT TERM 16 23011 - 23047 + r 84 -5.9 -5.1971 | opp_overlap 23015 TCTTTATAACTCTAG CAAATCCCCATGCCA CTTATGA TAGTATGGGGATCTG TTTTTAGTTTTTGAT CKL_4036 23452 - 23051 - | phage related protein TERM 17 23100 - 23114 + g 81 -2.9 -5.71983 | GCTTGTAGTACCTGC GAAAA ATTGA TTTTC TTTTTTTCTGCTTGA TERM 18 23136 - 23162 + g 74 -7.2 -4.13368 | opp_overlap 23141, overlap 23138 TCTGCTTGATATTTT AACCACTGTGGC ATG GTCACTGTGGTA TTTACTGTTTTATTA TERM 19 23138 - 23160 + g 82 -9.8 -3.63315 | opp_overlap 23141, overlap 23136 TGCTTGATATTTTAA CCACTGTGGC ATG GTCACTGTGG TATTTACTGTTTTAT TERM 20 23217 - 23233 + g 81 -2.2 -5.96894 | ATATCTGCCTCTACA GGGACT ATAAA ATTCCC TTTTTTTGTTTCGAT CKL_4037 23688 - 23506 - | hypothetical protein CKL_4038 24013 - 24342 + | hypothetical protein CKL_4039 24791 - 24396 - | hypothetical protein TERM 21 24841 - 24820 - R 93 -8.1 -5.28755 | opp_overlap 24820 AAATATATTAAAAAA GGTATCTAA TGGA CTAGATACC TTGATACCATCTAAA CKL_4040 25364 - 24924 - | hypothetical protein TERM 22 25368 - 25383 + r 70 -5.4 -4.53303 | TTGTATCTGCACTAT GGTTGC ACCA GTAACC TTTTCTATAAAACTA CKL_4041 26589 - 25414 - | FtsK/SpoIIIE and related protein TERM 23 26960 - 26993 + r 73 -8.4 -3.12449 | opp_overlap 26965, overlap 26965 AACATTGATCAATAA AAAAAGCAACTATT CCATCA AATAGTTGCTTTTA TATATATTAATACCA TERM 24 26988 - 26965 - R 100 -9 -5.84381 | opp_overlap 26960 26965 TGATCAATAAAAAAA GCAACTATTC CATC AAATAGTTGC TTTTATATATATTAA TERM 25 26965 - 26988 + r 87 -8.3 -4.68124 | opp_overlap 26965, overlap 26960 TGATCAATAAAAAAA GCAACTATT CCATCA AATAGTTGC TTTTATATATATTAA CKL_4042 27433 - 27014 - | hypothetical protein CKL_4043 27730 - 27464 - | hypothetical protein CKL_4044 28653 - 27742 - | hypothetical protein CKL_4045 28877 - 29461 + | hypothetical protein TERM 26 29481 - 29506 + T 100 -9.9 -4.73682 | opp_overlap 29485 TTATATTTAAGTTTA GTAACCATAAT ATTT GTTATGGTTAC TTTTATATTGTCAAC TERM 27 29571 - 29554 - T 75 -7.7 -4.06993 | opp_overlap 29554 CTATACAGGAAATAA GGTGCTC ATGT AAGCACC TCTTAGGCTTGTTTC CKL_4046 29756 - 29574 - | hypothetical protein CKL_4047 29967 - 29758 - | hypothetical protein TERM 28 30051 - 30028 - R 77 -7.5 -4.18367 | TAGTATATAGAGAAA GGAAACCAG TTAGGG CTAGTTTCC CGATTGTTTAAGAAA TERM 29 30120 - 30130 + r 70 -5.4 -4.55798 | AGCCCTTTTACCGTT GGAA CAA TTCC TTTTGCTTTGCACTC CKL_4048 31048 - 30293 - | DNA methylase TERM 30 31110 - 31138 + r 73 -8.1 -3.51478 | opp_overlap 31111 31113, overlap 31106 31111 TATAACAAGTAAAAA ATATAGTGGCCTC AAT GGGGCCACTAAAA TTAATTCTGTGCTGT TERM 31 31111 - 31137 + r 87 -11.6 -2.70164 | opp_overlap 31111 31113, overlap 31110 31106 ATAACAAGTAAAAAA TATAGTGGCCTC AAT GGGGCCACTAAA ATTAATTCTGTGCTG TERM 32 31137 - 31111 - R 100 -9.4 -5.39221 | opp_overlap 31111 31110 31106, overlap 31113 ATAACAAGTAAAAAA TATAGTGGCCTC AAT GGGGCCACTAAA ATTAATTCTGTGCTG TERM 33 31135 - 31113 - R 100 -12 -4.30543 | opp_overlap 31111 31110 31106, overlap 31111 AACAAGTAAAAAATA TAGTGGCCTC AAT GGGGCCACTA AAATTAATTCTGTGC CKL_4049 31555 - 31139 - | phage related protein TERM 34 31662 - 31629 - R 80 -5.5 -5.21709 | CCTTACATTAAAAAA TTCTCACTTTACC TTTCCCTT GATAAAATGAGAA TTTAAATTATTTTAG CKL_4050 32594 - 31674 - | glycosyl hydrolase CKL_4051 32999 - 32607 - | holin protein TERM 35 33058 - 33040 - R 82 -4.6 -5.58074 | TAAGCATTAAAAAAA GCCTTAGA CCT TCTAAAAC TCCTTATATTCTCTT TERM 36 33235 - 33224 - R 86 -4.4 -5.8901 | AGACAAAATAAAAAA GCTA TCTC TAGC CCTATTTTGCCTTGT CKL_4052 33712 - 33254 - | hypothetical protein TERM 37 33673 - 33683 + g 74 -4 -5.15969 | opp_overlap 33673 CCATTATAAATATTA GAAT TAA ATTC TTTTTTAAGTTGGAA CKL_4053 34176 - 33688 - | hypothetical protein CKL_4054 36927 - 34177 - | phage structural protein CKL_4055 38026 - 36929 - | phage related protein CKL_4056 38902 - 38030 - | phage related protein TERM 38 38872 - 38841 - G 74 -6.7 -4.19735 | gap 1, opp_overlap 38841 TTTTCCAAAACGAAA GGGCA-AGAATTAC CTAAT GTAATGCTCTGCCC TCTACTATTTATATA CKL_4057 46601 - 38916 - | phage related protein TERM 39 39941 - 39956 + g 74 -6.2 -4.38843 | GTTCAGAGTATTCTT CTTTCA TAAA TGAAAG TTTCTTCATATTTTC TERM 40 43920 - 43942 + g 100 -6.4 -6.07374 | opp_overlap 43920 TTGATATATAGTTAA TATCTGATTT TCT AAATCCGATA TTTTTTGTTTTTTCT TERM 41 44817 - 44847 + g 76 -9.6 -3.13475 | TACTGCTGTTGCTGC GGCTCCTGCGGCGG CAC TTGCGGCAGCAGCC TTCCCTGTAAACTTA TERM 42 45728 - 45694 - G 71 -8 -3.32963 | overlap 45697 AGTTCCATTCCAGAA GAAGCAGCTAAATCCA TTG TAGATTTAAGTGCTCC ACCTTTTATTTGCGC TERM 43 46657 - 46628 - R 75 -5.9 -4.72272 | opp_overlap 46628, overlap 46635 CTTTTTGAGGAAAAA TAAAAAAGCCTTA TTTC TAAGACTTTTTAA ATATTATTTTATTAA TERM 44 46650 - 46635 - R 91 -4 -5.95286 | opp_overlap 46628, overlap 46628 AGGAAAAATAAAAAA GCCTTA TTTC TAAGAC TTTTTAAATATTATT CKL_4058 47200 - 46832 - | hypothetical protein TERM 45 47351 - 47372 + r 71 -3.8 -5.11063 | gap 1, opp_overlap 47341 47351 ACAATGAAAAGAATT TTCTAGGAG TTGTT CTCC-AGAA TTTTTCTTCCGTCAT CKL_4059 47797 - 47435 - | hypothetical protein TERM 46 47856 - 47841 - R 84 -9 -3.94853 | TAATTTAATAGCAAA GAGGGT ATAA ACCCTC CATATTAAGCATCCA CKL_4060 48775 - 47861 - | phage related protein TERM 47 48827 - 48810 - R 100 -6.3 -5.92399 | opp_overlap 48818 TAACAAAATAAAAAA GCTCTCA ATTT TGAGAAC TCTCAACATATTTAA CKL_4061 49140 - 48814 - | hypothetical protein CKL_4062 49523 - 49137 - | hypothetical protein TERM 48 49419 - 49437 + g 74 -6 -4.614 | overlap 49429 49430 TGCTACTGGTTGAGC TGCTGC CTTAAGT GCAGCA TTTTGTATGCTTGCA CKL_4063 49925 - 49557 - | bacteriophage head-tail adaptor TERM 49 49618 - 49639 + gr 80 -8.9 -3.54838 | opp_overlap 49632, overlap 49632 TGATATTTAATGTCA TCTATGAAA GTAA TTTCATAGA TTCTATCAATCTCTT CKL_4064 50205 - 49888 - | hypothetical protein CKL_4065 50428 - 50225 - | hypothetical protein CKL_4066 51680 - 50493 - | major capsid phage protein CKL_4067 52428 - 51661 - | ClpP-like phage protease TERM 50 52394 - 52365 - GR 74 -2.9 -5.38054 | gap 1, opp_overlap 52365 52359, overlap 52359 CTCCATAAATAAAAA TGTCAGCTTGTTTA TCA TCATCA-GCTGACA TTTTCATTTGCCAAA CKL_4068 53641 - 52385 - | phage portal protein TERM 51 53359 - 53396 + gr 71 -8.8 -2.84794 | gap 1, overlap 53356 53360 ATTCAAAGCTTGTCA TAT-TCTGATTTGGTGA ATTAC TTACCAAATCAGAGATA TCATTATGAACTTCC CKL_4069 56619 - 53638 - | phage terminase, large subunit TERM 52 55200 - 55169 - G 74 -8.9 -3.13403 | opp_overlap 55176, overlap 55176 TGTTCTTTATCAACA TAAAAAAGCACTG AATGAA CAGTGCTTTTTTT CTCATTACACTTAGC TERM 53 55176 - 55193 + g 100 -7 -5.71983 | opp_overlap 55169 55176 TATCAACATAAAAAA GCACTG AATGAA CAGTGC TTTTTTTCTCATTAC TERM 54 55193 - 55176 - G 93 -7 -5.49569 | opp_overlap 55176, overlap 55169 TATCAACATAAAAAA GCACTG AATGAA CAGTGC TTTTTTTCTCATTAC CKL_4070 57112 - 56609 - | phage terminase, small subunit CKL_4071 57550 - 57242 - | phage endonuclease TERM 55 57615 - 57589 - R 100 -6.6 -5.79595 | opp_overlap 57589, overlap 57582 TCTCAAAATAAAAAA GCCTGTCCTTTT TAC AATAGAACAAGC TTTTAACCTATTAGA CKL_4072 57919 - 57626 - | phage transglycosylase CKL_4073 58222 - 57953 - | hypothetical protein TERM 56 58446 - 58423 - R 100 -11.1 -4.78839 | opp_overlap 58427 AATCCCATAACAAAA GGCACTTGA ACTTAA TCAAGTGCC TTACCCACTAATTGC CKL_4074 58973 - 58524 - | hypothetical protein SEQUENCE gi|153952670|ref|NC_009706.1| Clostridium kluyveri DSM 555, complete genome (length 3964618) dnaA 1 - 1356 + | chromosomal replication initiation protein dnaN 1615 - 2718 + | DNA polymerase III subunit beta CKL_0003 2746 - 2952 + | hypothetical protein TERM 1 3795 - 3820 + G 74 -5.5 -4.79955 | gap 1, opp_overlap 3798, overlap 3796 3798 ATATATAAAGGCATT ACA-CTCTATGG ACC CCATAGAGATGA TTTTATTGTGAATAT TERM 2 3796 - 3819 + G 78 -9 -3.46888 | gap 1, opp_overlap 3798, overlap 3795 3798 TATATAAAGGCATTA CA-CTCTATGG ACC CCATAGAGATG ATTTTATTGTGAATA TERM 3 3798 - 3816 + G 87 -11.8 -2.57028 | opp_overlap 3798, overlap 3796 3795 TATAAAGGCATTACA CTCTATGG ACC CCATAGAG ATGATTTTATTGTGA TERM 4 3816 - 3798 - g 88 -11.8 -2.85446 | opp_overlap 3798 3796 3795 TATAAAGGCATTACA CTCTATGG ACC CCATAGAG ATGATTTTATTGTGA recF 3033 - 4127 + | recombination protein F TERM 5 4347 - 4337 - g 90 -4 -6.01187 | opp_overlap 4337 AAGTAAATAAAAAAA GTAA AAT TTAC TTGTCACCTATATCT CKL_0005 4147 - 4410 + | hypothetical protein gyrB1 4432 - 6345 + | DNA gyrase subunit B TERM 6 8685 - 8703 + G 72 -9 -2.63631 | TTAATGTATCTGATA TTTCTACT ACT AGTAGAAA TGCTATGGGAGTTAC gyrA1 6362 - 8782 + | DNA gyrase subunit A TERM 7 9949 - 9930 - f 71 -7.8 -3.64371 | gap 1, overlap 9932 AAGTGAGATGTGAAA GACCCGGGC TTA ACCCGGG-C AGTGCATTTCAAACT TERM 8 9948 - 9932 - f 93 -11.5 -3.39844 | overlap 9930 GTGAGATGTGAAAGA CCCGGGC TTA ACCCGGG CAGTGCATTTCAAAC TERM 9 10844 - 10825 - f 73 -9.2 -2.65808 | opp_overlap 10828 10831, overlap 10822 10837 AGTCGTAACAAGGTA GCCGTAGG AGAA CCTGCGGC TGGATCACCTCCTTT TERM 10 10903 - 10887 - f 73 -4.3 -5.01732 | overlap 10874 AAGGCTGGGAAAAAA CCTGCCT TAA AAGCTGG AATTTGAGATAAATA TERM 11 11127 - 11150 + F 72 -6.2 -4.27617 | AACCTTTGTAGTGGA TAAGTATAAA TGAG TTTATGCTTA TTTTAATAAGATGTA TERM 12 11372 - 11350 - f 80 -8.5 -3.90856 | gap 1, opp_overlap 11345, overlap 11354 AATTTTTTAATGAAA CTCACTCAGC TAAG GCTGAG-GAG TGCAATTTAGGCACC TERM 13 11369 - 11354 - f 73 -9 -2.70979 | opp_overlap 11345, overlap 11350 TTTTAATGAAACTCA CTCAGC TAAG GCTGAG GAGTGCAATTTAGGC TERM 14 11704 - 11687 - f 86 -9.9 -3.695 | GGGAAAGAGCCCAAA CCGGAAA CTTG TTTCCGG GGTAGAGGTCAGGTG TERM 15 11870 - 11855 - f 81 -10.4 -2.71011 | ACCTTGTGGGAAGCA GGGAGG ACCA CCTCCC AAGGCTAAATACTAC TERM 16 11944 - 11933 - f 75 -7.2 -4.2354 | GAAAGGTGAAAAGAA CCCC GGGA GGGG AGTGAAATAGAACCT TERM 17 11997 - 12010 + F 71 -4.5 -4.82901 | opp_overlap 11997 TCGAAGTACGTTAAA GTACG ACGG CGTGC TTTTTGTAGAACGAG TERM 18 14651 - 14683 + F 100 -15.2 -4.25437 | opp_overlap 14651 14656, overlap 14656 CTTTATCTCCACCAA GAAAAGAACTACAT AGTAA ATGTAGTTCTTTTC TTTATATCTTAATTT TERM 19 14683 - 14651 - f 100 -15.2 -3.15544 | opp_overlap 14651 14656, overlap 14656 CTTTATCTCCACCAA GAAAAGAACTACAT AGTAA ATGTAGTTCTTTTC TTTATATCTTAATTT TERM 20 14656 - 14678 + F 100 -9.3 -5.08878 | opp_overlap 14656 14651, overlap 14651 TCTCCACCAAGAAAA GAACTACAT AGTAA ATGTAGTTC TTTTCTTTATATCTT TERM 21 14678 - 14656 - f 100 -9.3 -4.71426 | opp_overlap 14651 14656, overlap 14651 TCTCCACCAAGAAAA GAACTACAT AGTAA ATGTAGTTC TTTTCTTTATATCTT CKL_0013 14825 - 15238 + | hypothetical protein TERM 22 15787 - 15799 + G 73 -7.7 -3.65812 | opp_overlap 15787 GTGAAAGAACATAAA GCAGA ACC TCTGC TTATATTAACAGGAG TERM 23 15799 - 15787 - g 82 -7.7 -4.40333 | opp_overlap 15787 GTGAAAGAACATAAA GCAGA ACC TCTGC TTATATTAACAGGAG CKL_0014 15394 - 15909 + | transcriptional regulator CKL_0015 15946 - 18660 + | hypothetical protein TERM 24 19165 - 19187 + G 73 -7.8 -3.6959 | overlap 19148 TCACCATATGACTTA GCAATTTCAT ATG GTGAGATTGC TTTCGATAATGGTGT TERM 25 19380 - 19362 - g 86 -3.2 -6.11243 | opp_overlap 19362 19366, overlap 19377 19378 ATTTAATAAAAAAAA GAAGTATT TAA AATATTTC CTTTTGGAAGAAAAC CKL_0016 18709 - 20103 + | hypothetical protein CKL_0017 20121 - 20468 + | hypothetical protein serS 20840 - 22120 + | seryl-tRNA synthetase TERM 26 22469 - 22453 - T 70 -8.7 -2.52543 | AGTTGGTTTAAGGCA CCGGTCT TGA AAACCGG CGTACGGGTGACCGT CKL_0021 22916 - 22722 - | recombinase-related protein TERM 27 23263 - 23285 + G 81 -9.2 -3.8512 | opp_overlap 23262 23263 23265 TCTCTGCCAGAGAAT CAGGGAAAAT CAT AATTTCCCTG TTATTATGCTGACTG TERM 28 23285 - 23263 - g 72 -9.2 -2.68823 | opp_overlap 23263, overlap 23262 23265 TCTCTGCCAGAGAAT CAGGGAAAAT CAT AATTTCCCTG TTATTATGCTGACTG TERM 29 23537 - 23561 + G 71 -8.7 -2.97171 | overlap 23543 AAGATATCTCTCACT CCTAAAGAGTT TTC AATTCTTTGGG TCCTTTGCTCCAATC TERM 30 23701 - 23688 - g 81 -4.5 -5.48063 | overlap 23692 ATCTAAGAGAAAAAA TGCAC GGCA GCGCA GAACACCCTAAATAT vanR 23060 - 23758 + | VanR TERM 31 24207 - 24186 - g 91 -7.3 -5.28166 | overlap 24177 GAAAAGCAAGAAAAA GCTGCTC TTGATGCC GAGCAGC GCAAGAATGATTTGG TERM 32 24860 - 24845 - g 82 -7.6 -4.70453 | opp_overlap 24840 24844, overlap 24838 AAGTAATACAGAAAA GACAGT CTTT ACTGTC GTACTTCCACAAAAG vanS 23748 - 24902 + | VanS TERM 33 24918 - 24884 - T 85 -7.2 -4.90918 | opp_overlap 24885, overlap 24885 ACAAAAGCAAGAAAA GGACAGGTTATCTG CTTAAGT CAGATAGCCTGTCT TCTTGTAAATAAAAA TERM 34 24885 - 24917 + T 100 -12.9 -3.8211 | opp_overlap 24884 24885 CAAAAGCAAGAAAAG GACAGGTTATCTG CTTAAGT CAGATAGCCTGTC TTCTTGTAAATAAAA TERM 35 24917 - 24885 - T 90 -10.7 -3.5211 | opp_overlap 24885, overlap 24884 CAAAAGCAAGAAAAG GACAGGTTATCTG CTTAAGT CAGATAGCCTGTC TTCTTGTAAATAAAA CKL_0024 25663 - 24959 - | VanZ-related protein TERM 36 25440 - 25430 - G 73 -8.2 -3.37537 | opp_overlap 25430 25432 25433 CAGTGGAAAATCGAA CCCC TTT GGGG TTATTATTCCAAAGC TERM 37 25430 - 25440 + g 77 -8.2 -3.9461 | opp_overlap 25430, overlap 25432 25433 CAGTGGAAAATCGAA CCCC TTT GGGG TTATTATTCCAAAGC TERM 38 25873 - 25855 - H 71 -4.6 -4.84914 | overlap 25872 ACCGAGATAAGAAAA TCTTAAGA AGT TCATAAGA TGGAATTCCAACATA CKL_0025 25943 - 26875 + | D-alanyl-D-alanine carboxypeptidase precursor CKL_0026 27197 - 27370 + | hypothetical protein TERM 39 27407 - 27419 + F 71 -4.1 -5.15634 | TTTATGTTCAGAATA TGCGA TTT TTGCA TTTTTTGATGGGATG TERM 40 27467 - 27479 + F 70 -6.3 -4.08485 | overlap 27472 AAAAATTACATTTAT TGGTT GTA AACCA TTTACTTTAGCTCCA CKL_0027 27578 - 28027 + | hypothetical protein CKL_0028 29626 - 28448 - | transposase TERM 41 28942 - 28926 - G 100 -10.9 -4.19238 | TGTTTAATTTGAAAA GCAAAGG CAT CCTTTGC AAAACTAACACCAAA TERM 42 29885 - 29866 - H 74 -6.6 -4.35747 | opp_overlap 29866 29865 GAAAAATAAAGTAAA TTAAAGTT ATTT AACTTTAA CTATATTATACGAGG CKL_0029 29947 - 30411 + | hypothetical protein TERM 43 30520 - 30495 - T 82 -5.5 -5.45802 | opp_overlap 30495 TTTCTAAAACAAAAA TAAGCACCC TAGATGAC GAGTGCTTA TTTTTAACAATATCA CKL_0030 31405 - 30542 - | hydrolase TERM 44 30657 - 30639 - G 77 -4 -5.42259 | opp_overlap 30652 TCATCTCTAAAAAAA TTTTCAAA TTC TTTAAAAA TTTTATCTTGATCAA TERM 45 31099 - 31122 + g 75 -2.5 -5.63103 | overlap 31109 CAGACTGATTGTTTA GTTCTTTAA TTGTTT TTAAAGCAC TTTTTTTAGTTAAAA CKL_0031 31735 - 31565 - | transposase TERM 46 31627 - 31637 + g 70 -4 -5.07523 | opp_overlap 31627 TTATATTCTTATAAT TCAA TTG TTGA TTTTGTTTATATCTA TERM 47 31883 - 31865 - H 90 -3.1 -6.20267 | TTAAAAACAAAAAAA GATGACA GTATA TGCCACC TCTAATATTAAATGA TERM 48 31904 - 31925 + H 74 -2.4 -5.56673 | TATTAAATGAAGAAA GAAGTAAT TCCTTT ATTATTTC TTTTTTATTGTCGGT TERM 49 32692 - 32680 - g 72 -4.9 -4.7878 | overlap 32667 TATGGAGAAAATAAA TTTCT CAA AGAAA TACAACAAAAATTAA TERM 50 33303 - 33293 - g 70 -4 -4.9448 | ATGCAGTAAAGAAAA TCTT CAA AAGA CTAGAATTACAGTTA CKL_0032 32455 - 33747 + | hypothetical protein TERM 51 33827 - 33843 + T 78 -9.5 -3.12999 | TGATGAGGGTGCGAA GGAAAAC AAA GTTTTCC TTCAATCTACCCTAC CKL_0033 34359 - 33889 - | hypothetical protein TERM 52 34975 - 34944 - H 70 -5.3 -4.50353 | gap 1, opp_overlap 34947, overlap 34947 AAATGAACAAAATAA TAACCGTT-GAAAC TTAGT GTTTCCAACGGTTT CTGGTGCATCAGAGA TERM 53 34947 - 34972 + H 72 -7 -3.97947 | gap 1, opp_overlap 34947 34944 TGAACAAAATAATAA CCGTT-GAAAC TTAGT GTTTCCAACGG TTTCTGGTGCATCAG TERM 54 34972 - 34947 - H 76 -7 -4.31859 | gap 1, opp_overlap 34947, overlap 34944 TGAACAAAATAATAA CCGTT-GAAAC TTAGT GTTTCCAACGG TTTCTGGTGCATCAG TERM 55 35793 - 35775 - g 81 -9 -3.78629 | AGGAAATTTAAAAGA TTCAGTAA CAG TTACTGAA AAGCAAGATGGAACT CKL_0035 35287 - 36546 + | hypothetical protein TERM 56 36609 - 36567 - f 90 -10.8 -3.31428 | opp_overlap 36574 36577, overlap 36574 AGGATAAAATATATA TTAAAAACAATTTGTCGGAA TAT TGCCGGCAAATTGTTTCCAA ATCAAGTGATTCAAA TERM 57 36602 - 36574 - f 95 -8.9 -4.87037 | opp_overlap 36574 36577, overlap 36567 AATATATATTAAAAA CAATTTGTCGGAA TAT TGCCGGCAAATTG TTTCCAAATCAAGTG TERM 58 36574 - 36602 + F 90 -11.1 -3.57462 | opp_overlap 36574 36567, overlap 36577 AATATATATTAAAAA CAATTTGTCGGAA TAT TGCCGGCAAATTG TTTCCAAATCAAGTG TERM 59 36577 - 36599 + F 72 -7 -3.92542 | opp_overlap 36574 36567, overlap 36574 ATATATTAAAAACAA TTTGTCGGAA TAT TGCCGGCAAA TTGTTTCCAAATCAA CKL_0036 36738 - 37463 + | ABC transporter CKL_0037 37450 - 38202 + | hypothetical protein TERM 60 38272 - 38299 + G 87 -8.7 -4.16259 | opp_overlap 38277 AATAATAATTCCCTT TATAATTGCAA GCATAA TTGCAATTATA TTTGTATCATTATCT TERM 61 39125 - 39114 - g 81 -3 -5.76633 | CCATACATAAAAAAA CAAT ACAA ATTG ACAATATGATAGATG CKL_0038 38216 - 39652 + | sensory transduction histidine kinase CKL_0039 39739 - 40428 + | transcriptional regulator TERM 62 40590 - 40602 + G 79 -2.7 -5.84432 | TTTTTTCAATCAAAA TATCT ATT GGATA TTTTTTTCTATTATA CKL_0040 40564 - 41625 + | hypothetical protein CKL_0041 42607 - 41741 - | hypothetical protein TERM 63 42167 - 42183 + g 71 -8 -3.21218 | ATATGAACGTTTTGA CCAGTC AATAA GACTGG TTGGTACTCCACAAT TERM 64 42401 - 42417 + g 74 -5.9 -4.59117 | overlap 42403 ATTATGTACTTGCTC TTCACAT TTT ATGTGGA TTTTATGATTGATTT CKL_0042 43030 - 42644 - | hypothetical protein TERM 65 42736 - 42759 + g 71 -8.4 -3.36492 | opp_overlap 42736 CGCTATCTAAGCCAA TATTATTTAC TAGT GTAAATAATA TTATAGAATTAAACA TERM 66 42759 - 42736 - G 71 -8.4 -3.19192 | opp_overlap 42736 CGCTATCTAAGCCAA TATTATTTAC TAGT GTAAATAATA TTATAGAATTAAACA TERM 67 43171 - 43182 + H 78 -4.4 -5.42862 | opp_overlap 43150, overlap 43181 TAAGTTTTATTATCT TAGG CTTT CCTA TTTTTTTGAAAATAT CKL_0043 43845 - 44750 + | transcriptional regulator TERM 68 44846 - 44818 - T 84 -4 -5.76237 | opp_overlap 44818, overlap 44807 GACAGAAATAAAAAA TAAGCATCTG GAATTAAAT CAAATGCTTA TTTTTTTCTCTAAGT TERM 69 44818 - 44846 + T 74 -2.5 -5.72616 | opp_overlap 44807 44818 GACAGAAATAAAAAA TAAGCATCTGG AATTAAA TCAAATGCTTA TTTTTTTCTCTAAGT TERM 70 45162 - 45111 - T 83 -5.1 -5.626 | gap 2, opp_overlap 45113 45118, overlap 45118 CATTGGATAAAAAAA TAA-AAAATTGTAAGTA-AAAATTA AATC TAATTTTATGCTTACAATTTTCTTA AATTAAGGCACAAGA TERM 71 45118 - 45154 + T 81 -7 -4.72029 | gap 1, opp_overlap 45111 45118, overlap 45113 TAAAAAAATAAAAAA TTGTAAGTA-AAAATTA AATC TAATTTTATGCTTACAA TTTTCTTAAATTAAG TERM 72 45154 - 45118 - T 100 -4.8 -6.12458 | gap 1, opp_overlap 45118 45113, overlap 45111 TAAAAAAATAAAAAA TTGTAAGTA-AAAATTA AATC TAATTTTATGCTTACAA TTTTCTTAAATTAAG CKL_0044 46535 - 45186 - | methylcitrate synthase CKL_0045 47644 - 46916 - | hypothetical protein CKL_0046 48306 - 47710 - | hypothetical protein TERM 73 48897 - 48883 - g 72 -7.1 -3.95787 | GATTACATTGATAAA GCACC TATAT GGTGC AGTGTAGATTTACGG TERM 74 49151 - 49133 - g 77 -4.6 -5.2291 | ATATTATAAGAAAAA CCTTTGAT GCC ATAAAAGG TGCTCCTAAAGCAAT leuA1 48796 - 50457 + | 2-isopropylmalate synthase CKL_0048 51057 - 50554 - | acetyltransferase psd 51987 - 51097 - | phosphatidylserine decarboxylase TERM 75 52401 - 52387 - g 74 -2.9 -5.38047 | TACTTATAGAAAAAA TAGAA ATTGA TTCTA AAAAGGAAAAAAATG CKL_0050 52191 - 52763 + | transcriptional regulator TERM 76 52773 - 52755 - T 77 -3.1 -5.626 | opp_overlap 52755 GATGGGATAAAAAAA GGAGAGT GATTT AATCTCC TTTAAAGTTTACCTG CKL_0051 54376 - 52775 - | hypothetical protein TERM 77 53128 - 53152 + g 86 -9.5 -4.08394 | overlap 53133 CTAAATTTATTCCTT CAAAATAATAG AAT CTGTTATTTTG TTTTAAAAAAGGTAT TERM 78 54382 - 54419 + r 72 -5.1 -4.82998 | gap 1, opp_overlap 54380 54389 54392, overlap 54386 54389 TCTTATTCATAAATA TATTTAATAACTAAAGCC AAA GGCTTTAGTTATC-ATTA TTTATTTTACTTTCA TERM 79 54386 - 54416 + r 100 -12.8 -4.47163 | opp_overlap 54380 54389 54392, overlap 54382 54389 ATTCATAAATATATT TAATAACTAAAGCC AAA GGCTTTAGTTATCA TTATTTATTTTACTT TERM 80 54389 - 54413 + r 100 -14.5 -3.16872 | opp_overlap 54380 54389 54392, overlap 54386 54382 CATAAATATATTTAA TAACTAAAGCC AAA GGCTTTAGTTA TCATTATTTATTTTA TERM 81 54413 - 54389 - R 100 -14.5 -3.22943 | opp_overlap 54389 54386 54382, overlap 54380 54392 CATAAATATATTTAA TAACTAAAGCC AAA GGCTTTAGTTA TCATTATTTATTTTA TERM 82 54410 - 54392 - R 95 -11.8 -3.73904 | opp_overlap 54389 54386 54382, overlap 54389 54380 AAATATATTTAATAA CTAAAGCC AAA GGCTTTAG TTATCATTATTTATT CKL_0052 54709 - 54407 - | hypothetical protein TERM 83 54940 - 54917 - H 84 -10.4 -2.96216 | gap 1, opp_overlap 54898 54936, overlap 54920 54933 GCTCAGTAGGATAGA GCA-GCGGTTT CCT AAACCGCGTGC CGGGGGTTCGATTCC TERM 84 54936 - 54920 - H 84 -10.9 -2.71744 | opp_overlap 54898, overlap 54917 54933 CAGTAGGATAGAGCA GCGGTTT CCT AAACCGC GTGCCGGGGGTTCGA TERM 85 54998 - 54974 - H 70 -8.8 -2.64099 | opp_overlap 54974 54972, overlap 54973 CGGGCGCACCATAAG TCTTGTAAAT GGTGA ATTTACAAGA TATTTATTTTATAAA TERM 86 54974 - 54998 + H 80 -8.8 -3.99938 | opp_overlap 54973 54974, overlap 54972 CGGGCGCACCATAAG TCTTGTAAAT GGTGA ATTTACAAGA TATTTATTTTATAAA tadA 55121 - 55558 + | hypothetical protein TERM 87 55548 - 55538 - T 71 -2.6 -5.46629 | overlap 55527 AATATGTTAAAAAAA TTTT TTA AAAA TAGAAGATAGAAGAA TERM 88 55987 - 55945 - T 100 -16.5 -3.73072 | gap 1, opp_overlap 55945 AAGTTGTCTAGTAAA GCAGGAGGCTACTGAAAAAC CTAG GTGTTTCAGT-GCCTCCCGC TTTACTAGGGCTCTT TERM 89 55945 - 55987 + T 100 -14.3 -3.74519 | gap 1, opp_overlap 55945 AAGTTGTCTAGTAAA GCAGGAGGCTACTGAAAAAC CTAG GTGTTTCAGT-GCCTCCCGC TTTACTAGGGCTCTT TERM 90 56099 - 56135 + T 71 -3.9 -5.11063 | TAGGTTGATTAAAAA TATACTGTTTTATCTAA TTG TTACGAAAAGCAGTATA TTTTTGTTGACTAAT CKL_0056 56565 - 56146 - | hypothetical protein CKL_0057 56766 - 56569 - | transcriptional regulator TERM 91 57221 - 57244 + H 88 -9.7 -4.41353 | opp_overlap 57221 CTACATATTGTGAAA GGCATTTGA TTAAGT TCAAATGCC TTTTGATATGTGTAA TERM 92 57244 - 57221 - H 84 -9.7 -3.60234 | opp_overlap 57221 CTACATATTGTGAAA GGCATTTGA TTAAGT TCAAATGCC TTTTGATATGTGTAA TERM 93 57451 - 57476 + H 72 -4.7 -4.84673 | opp_overlap 57452, overlap 57446 57452 AAAAGAACATTGAAA ATAGGCACTGT TAAT GCAGTGTCTAC TTTTATATTATTTAC TERM 94 57452 - 57475 + H 73 -8.2 -3.49177 | opp_overlap 57452, overlap 57451 57446 AAAGAACATTGAAAA TAGGCACTGT TAAT GCAGTGTCTA CTTTTATATTATTTA TERM 95 57698 - 57722 + H 74 -5 -5.186 | CAATATTATCAAAAG TAAGTACCCG TCACC TGGGTGCTTG TTTTTATATCTTTTA TERM 96 57889 - 57915 + H 100 -5.2 -5.95539 | opp_overlap 57892, overlap 57892 CTCTTAATATCACAC AAAGTACCAATA TTA TTTTGGTACTTA TTTTTTTATTTCAAA TERM 97 57892 - 57912 + H 84 -6.9 -5.01858 | opp_overlap 57892, overlap 57889 TTAATATCACACAAA GTACCAATA TTA TTTTGGTAC TTATTTTTTTATTTC TERM 98 57912 - 57892 - H 72 -6.9 -4.13591 | opp_overlap 57892 57889 TTAATATCACACAAA GTACCAATA TTA TTTTGGTAC TTATTTTTTTATTTC CKL_0058 57973 - 58518 + | hypothetical protein CKL_0059 58618 - 58854 + | hypothetical protein TERM 99 59502 - 59486 - g 73 -8.1 -3.54638 | AGAATGTCCTGTAAA TTACCTT TGT AAGGTAA TACAGACAATTCCTA flr 59148 - 59711 + | Flr TERM 100 59786 - 59809 + F 100 -10.4 -5.01811 | opp_overlap 59783 GACACAACACATTCA GAGTCTTGGA GAAA TCTAAGACTC TTTTTACTTTGCTCC CKL_0061 60074 - 60253 + | hypothetical protein TERM 101 60255 - 60280 + F 80 -3.9 -5.71712 | overlap 60260 ATACAAATAAATAAT TATTGCCCTGG GAAA CCAGGGTTTTA TTTTTTTATGTAAAA TERM 102 60260 - 60275 + F 100 -10.4 -5.61277 | overlap 60255 AATAAATAATTATTG CCCTGG GAAA CCAGGG TTTTATTTTTTTATG CKL_0062 60371 - 60553 + | hypothetical protein TERM 103 60638 - 60605 - T 84 -9.7 -3.6581 | opp_overlap 60612, overlap 60607 60612 ATTACTCCTAAAAGA GATAAAAGCTCTGGT GTAT ACCAGGGCTTTTATT GAGGTAATACATAAT TERM 104 60636 - 60607 - T 95 -12.3 -3.40622 | opp_overlap 60612, overlap 60605 60612 TACTCCTAAAAGAGA TAAAAGCTCTGGT GTAT ACCAGGGCTTTTA TTGAGGTAATACATA TERM 105 60631 - 60612 - T 83 -7.8 -4.78933 | opp_overlap 60612, overlap 60607 60605 CTAAAAGAGATAAAA GCTCTGGT GTAT ACCAGGGC TTTTATTGAGGTAAT TERM 106 60612 - 60631 + T 100 -10 -4.66318 | opp_overlap 60612 60607 60605 CTAAAAGAGATAAAA GCTCTGGT GTAT ACCAGGGC TTTTATTGAGGTAAT TERM 107 60832 - 60857 + T 100 -13.4 -4.27483 | overlap 60827 CAATATATTCTCCAA GCCTACCAGA AAAATC TCTGGTAGGC TTTACTTTTATGCCT CKL_0063 61169 - 60906 - | hypothetical protein CKL_0064 61712 - 61365 - | hypothetical protein CKL_0065 62281 - 61766 - | hypothetical protein ppsA 64932 - 62299 - | phosphoenolpyruvate synthase TERM 108 62848 - 62866 + g 73 -8 -3.43773 | opp_overlap 62838, overlap 62857 TTGAACCAACTTTTC GGCCTCCC GCA GGAGGGCC TGTTTGACTATCCAA TERM 109 64565 - 64600 + g 76 -3.4 -5.40474 | opp_overlap 64552, overlap 64565 64566 GAGGCTGTCGGCAGA T-CCTCTGCCGTAGCG CTGGAA CG-TACGGCATAGGCA TTTTTTTCACCAAGT TERM 110 64566 - 64598 + g 71 -8.5 -2.89655 | gap 1, opp_overlap 64552, overlap 64565 64565 AGGCTGTCGGCAGAT CCTCTGCCGTAGCG CTGGAA CG-TACGGCATAGG CATTTTTTTCACCAA TERM 111 64960 - 64981 + r 79 -6.7 -4.67353 | TTCTTTTTGCGTTTT TATTTCTCA TTAA TGAGAAGTA TTTTTGAGTAAATCA CKL_0067 65626 - 65006 - | hypothetical protein TERM 112 65670 - 65644 - R 100 -15.4 -3.55761 | opp_overlap 65646, overlap 65653 65659 GACTCACCTCGTAAA TGTTATTAACCG AAA CGGTTAATAACA TAATAACACAATTAA TERM 113 65646 - 65701 + r 78 -9.4 -3.05294 | opp_overlap 65644 65653 65659 65677 65682 CTCACCTCGTAAATG TTATTAACCGAAACGGTTAATA ACATAATAACAC AATTAACCGTTTCGGTCAATAA TATTAAAAACTTTAA TERM 114 65694 - 65653 - R 95 -12.5 -3.2048 | opp_overlap 65646, overlap 65644 65659 65677 65682 CGTAAATGTTATTAA CCGAAACGGTTAATAACAT AATA ACACAATTAACCGTTTCGG TCAATAATATTAAAA TERM 115 65698 - 65682 - R 72 -7.3 -3.89875 | opp_overlap 65646, overlap 65659 65653 65677 AACATAATAACACAA TTAACCG TTT CGGTCAA TAATATTAAAAACTT CKL_0068 66073 - 65837 - | hypothetical protein TERM 116 66034 - 66045 + g 77 -4.4 -5.29445 | TACTTGCTTCATACT GCAT TTTG ATGC TTTTTGTTGTTAAAA CKL_0069 66421 - 66089 - | hypothetical protein CKL_0070 66894 - 66418 - | sigma factor CKL_0071 67119 - 66940 - | transposase TERM 117 67376 - 67408 + r 100 -8.5 -5.35721 | opp_overlap 67376 67377, overlap 67377 GGCAAAAATTAAAAA TGACAGGCTTATCTT TGG AAGATACTCCTGTCG TTTTTGTTCTTGTAT TERM 118 67408 - 67376 - R 82 -6.3 -5.18355 | opp_overlap 67376 67377, overlap 67377 GGCAAAAATTAAAAA TGACAGGCTTATCTT TGG AAGATACTCCTGTCG TTTTTGTTCTTGTAT TERM 119 67407 - 67377 - R 86 -9.8 -3.69386 | opp_overlap 67376 67377, overlap 67376 GCAAAAATTAAAAAT GACAGGCTTATCTT TGG AAGATACTCCTGTC GTTTTTGTTCTTGTA TERM 120 67377 - 67407 + r 89 -9.8 -3.78992 | opp_overlap 67377 67376, overlap 67376 GCAAAAATTAAAAAT GACAGGCTTATCTT TGG AAGATACTCCTGTC GTTTTTGTTCTTGTA CKL_0072 69188 - 67437 - | transport protein TERM 121 67844 - 67831 - G 70 -8.1 -3.14463 | opp_overlap 67824 AACTTGTCGCAGCAA GCTGC TTTT GCAGC CTCCATCACTTGATG CKL_0073 71004 - 69181 - | transport protein TERM 122 70128 - 70117 - G 71 -3 -5.26158 | CAAATAAAAAATAAA TTTG CTGG CAAA TGAAATATAATCTGT TERM 123 70200 - 70186 - G 72 -5.8 -4.47707 | opp_overlap 70185 TGGTATTAAAAATAA GTAAAT GTT ATTTAC AATTGTGATAAAGGC TERM 124 71126 - 71073 - H 95 -11.3 -4.20712 | opp_overlap 71079, overlap 71074 71082 TACAACACTTGAAAA CTTTAAGGAGTATCATTAAGTTAGT TTTA ACTAACTTAATGATACTCCTTTTTC TCTATTTTTTCAATC TERM 125 71125 - 71074 - H 100 -14.8 -3.11704 | opp_overlap 71079, overlap 71073 71082 ACAACACTTGAAAAC TTTAAGGAGTATCATTAAGTTAGT TTTA ACTAACTTAATGATACTCCTTTTT CTCTATTTTTTCAAT TERM 126 71079 - 71120 + H 100 -23.5 -5.20633 | opp_overlap 71074 71073 71082 ACTTGAAAACTTTAA GGAGTATCATTAAGTTAGT TTTA ACTAACTTAATGATACTCC TTTTTCTCTATTTTT TERM 127 71117 - 71082 - H 100 -18 -2.78738 | opp_overlap 71079, overlap 71074 71073 TGAAAACTTTAAGGA GTATCATTAAGTTAGT TTTA ACTAACTTAATGATAC TCCTTTTTCTCTATT TERM 128 71457 - 71487 + H 85 -9.9 -3.4174 | opp_overlap 71427, overlap 71463 CTGCATCCTGGCTTA CAAAAAGATTGGT GAGGA GCCAGTCTTTTTG TTGCGTTGTTTTTAT TERM 129 72247 - 72200 - g 85 -8 -4.4017 | gap 1, overlap 72207 72216 TCAATTCCTACAAAA GAAAAAAGCTAAATA-ATCGTAG TCC CTACGAAACATTCAGCTTTTATC ATGGAGAAGAAGTTT TERM 130 72240 - 72207 - g 90 -4.7 -5.86976 | gap 1, overlap 72200 72216 CTACAAAAGAAAAAA GCTAAATA-ATCGTAG TCC CTACGAAACATTCAGC TTTTATCATGGAGAA TERM 131 72230 - 72216 - g 82 -8.6 -4.12072 | overlap 72207 72200 AAAAAAGCTAAATAA TCGTAG TCC CTACGA AACATTCAGCTTTTA CKL_0074 71755 - 72333 + | transposase CKL_0075 72415 - 72633 + | hypothetical protein TERM 132 72634 - 72656 + F 82 -9.4 -3.33815 | opp_overlap 72634 ATCTTAGTCGTATAA TATTTAATGT TTT ACATTAAATA TTAGTTGAAAAACAT TERM 133 72656 - 72634 - f 79 -9.4 -3.31263 | opp_overlap 72634 ATCTTAGTCGTATAA TATTTAATGT TTT ACATTAAATA TTAGTTGAAAAACAT CKL_0076 72725 - 73198 + | hypothetical protein CKL_0077 73213 - 73431 + | transcriptional regulator TERM 134 73794 - 73761 - f 100 -15.7 -3.53307 | opp_overlap 73763 73767 73770, overlap 73767 AACAATTTGATATAA TATAAACAAGTTAGA TTAA TCTAACTTGTTTATA TTGAGATAATTGATA TERM 135 73763 - 73792 + F 100 -13.9 -3.08015 | opp_overlap 73761 73767, overlap 73767 73770 CAATTTGATATAATA TAAACAAGTTAGA TTAA TCTAACTTGTTTA TATTGAGATAATTGA TERM 136 73767 - 73788 + F 91 -10.3 -4.20368 | opp_overlap 73767 73761, overlap 73763 73770 TTGATATAATATAAA CAAGTTAGA TTAA TCTAACTTG TTTATATTGAGATAA TERM 137 73788 - 73767 - f 91 -10.3 -4.31164 | opp_overlap 73763 73767 73770, overlap 73761 TTGATATAATATAAA CAAGTTAGA TTAA TCTAACTTG TTTATATTGAGATAA TERM 138 73770 - 73785 + F 70 -6.2 -4.21773 | opp_overlap 73767 73761, overlap 73767 73763 ATATAATATAAACAA GTTAGA TTAA TCTAAC TTGTTTATATTGAGA CKL_0078 73847 - 74674 + | polyketide methyltransferase CKL_0079 74719 - 75510 + | polyketide methyltransferase TERM 139 75730 - 75746 + T 74 -5.1 -5.1361 | opp_overlap 75730 75731, overlap 75731 TAAATTTACTTTAAA GGCATGT ATC ACATGCG TTTTTTGCCATTTGT TERM 140 75731 - 75745 + T 76 -8.6 -3.6654 | opp_overlap 75730 75731, overlap 75730 AAATTTACTTTAAAG GCATGT ATC ACATGC GTTTTTTGCCATTTG TERM 141 75745 - 75731 - T 71 -8.6 -2.77236 | opp_overlap 75731 75730, overlap 75730 AAATTTACTTTAAAG GCATGT ATC ACATGC GTTTTTTGCCATTTG CKL_0080 76159 - 75725 - | transcriptional regulator CKL_0081 77893 - 76184 - | transport protein TERM 142 77826 - 77836 + g 81 -4 -5.66338 | TTAGAAAGAGCAATC CATT TAT AATG TTTTTTATTATGTTT TERM 143 78016 - 77997 - R 72 -5.1 -4.83269 | opp_overlap 77997 AGATTATATCAAAAA TTAGTTG CCTAGT CAACTAA TTTGGTTTATGGAAA CKL_0082 79556 - 78123 - | cation transporting ATPase CKL_0083 80002 - 79652 - | cation transporting ATPase TERM 144 80024 - 80044 + r 73 -5.5 -4.66833 | opp_overlap 80024 ACCTCATTTCATGAA TTTTCCGAT GGC ATCAGAAAA TTTTTCAAGTTCAGA CKL_0084 80293 - 80012 - | hypothetical protein TERM 145 80308 - 80338 + r 100 -21.4 -3.2963 | opp_overlap 80316 TAGTTTACCCTCCTT TCTCAATATCCCCC CGT GGGGGATATTGAGA TTATAACAAGATACT TERM 146 80330 - 80316 - R 91 -11.4 -3.01712 | opp_overlap 80308 CCTCCTTTCTCAATA TCCCCC CGT GGGGGA TATTGAGATTATAAC apeB 81726 - 80422 - | putative aminopeptidase 2 TERM 147 81915 - 81889 - H 71 -2.4 -5.44119 | opp_overlap 81896, overlap 81890 81896 TCTATTTCAAAAAAA TTATAAATTTAC CAT GTAAATATATAG TTAAAATATTATTTA TERM 148 82062 - 82088 + H 86 -5.9 -5.45726 | CTCCCTTATTAAAAA TAAGTGCTGGC AATTA GCTGGTACTTA TTTTTTTAAGATGTG TERM 149 82733 - 82708 - g 74 -5.7 -4.68384 | gap 1 AGGTATTGAAGAAAA TGTATCATTATA TTT TA-AATGATACA AATACAGAATTTAGT CKL_0086 82236 - 83639 + | hypothetical protein purA 83715 - 85001 + | adenylosuccinate synthetase TERM 150 85008 - 85058 + F 100 -11 -4.84311 | gap 1 AATATGTAATTTGAA TTTCACCTTTAAATAAACTTCTA AATTAA TAGAACTT-ATTTAAAGGTGAAA TTTTATTCTATGGAA TERM 151 85094 - 85084 - f 78 -2.6 -5.75538 | opp_overlap 85089 TGGAAAAAATAAAAA TTAT GTT ATAA AATAAGTTTATAGTA TERM 152 85600 - 85585 - g 72 -4.8 -4.84017 | AAGCTTCCAGAAAAA TTTTCT ATAG AGAAAA GCTTTGAAGTGAGGT CKL_0088 85129 - 85878 + | acyl-acyl carrier protein thioesterase TERM 153 85914 - 85875 - T 95 -7.3 -5.40072 | opp_overlap 85881 TGTTTTGCAAAAAAA GTAAAAGTGCTAATGAA TTATTT TTCAGCAGCACTTTTTC CTGCCGTAAATCCAG CKL_0089 87121 - 85892 - | flavoprotein TERM 154 86629 - 86619 - G 73 -8.2 -3.48684 | opp_overlap 86613 CCAGAACCATCAGAA CCGG TGT CCGG AGCAGATTTACCTCC CKL_0090 87267 - 87638 + | hypothetical protein TERM 155 87971 - 87955 - T 70 -8.7 -2.62616 | TCAGCTGGGAGAGCA CCTGCCT TAC AAGCAGG GGGTCACAGGTTCGA TERM 156 88321 - 88305 - T 70 -8.7 -2.62616 | TCAGCTGGGAGAGCA CCTGCCT TAC AAGCAGG GGGTCACAGGTTCGA TERM 157 88528 - 88566 + T 100 -13.5 -5.32699 | gap 2, opp_overlap 88537, overlap 88537 GAAGCCTACTGCCAG CACCAAAAACCCCATGATA CAA TATCATGGGGTT--TGGTG TTTTTTGCTATTTAA TERM 158 88559 - 88537 - T 100 -15 -4.77036 | opp_overlap 88528 88537 TGCCAGCACCAAAAA CCCCATGATA CAA TATCATGGGG TTTGGTGTTTTTTGC TERM 159 88537 - 88559 + T 100 -15 -4.18668 | opp_overlap 88537, overlap 88528 TGCCAGCACCAAAAA CCCCATGATA CAA TATCATGGGG TTTGGTGTTTTTTGC CKL_0098 89560 - 88574 - | DNA replication protein DnaC TERM 160 89202 - 89218 + g 88 -6.7 -5.17353 | AATTTAACTAACTTC TGTTTAT AGC ATAAACA TTTTTTAGTGCCTAT TERM 161 89300 - 89318 + g 86 -3.1 -6.22802 | gap 1 CACAGGATAATTATT GGC-CAGC ATAA GTTGAGCC TTTTTTTTTCTCAGA CKL_0099 90545 - 89553 - | DnaD-related protein TERM 162 90738 - 90708 - H 95 -12.2 -3.09452 | opp_overlap 90706 90709, overlap 90723 90725 AGTTTTTAATATATA CTTTGATTATCAAA ATA TTTGATAATCAAAA ATTAAAAAAGGAGAG TERM 163 91561 - 91550 - g 72 -3.6 -5.24416 | overlap 91552 TAAGTATAATAAAAA GCCC TGTA GGAC TTCCAGGAAGGGCTA CKL_0100 90760 - 91824 + | hypothetical protein TERM 164 92011 - 91984 - g 74 -7.2 -4.0942 | gap 1 TATCTATTACAGAAA TACATACC-ATAG AAG CTATAGGCATGTA TAAGACTAGAAAAAT CKL_0101 91866 - 92342 + | transcriptional regulator fabH1 92335 - 93306 + | FabH1 acp1 93331 - 93558 + | Acp1 fabI 93571 - 94515 + | FabI fabD 94531 - 95469 + | hypothetical protein fabG1 95480 - 96226 + | FabG1 fabF 96251 - 97489 + | 3-oxoacyl-(acyl carrier protein) synthase II TERM 165 97792 - 97776 - g 72 -7.3 -3.82187 | opp_overlap 97776 97779, overlap 97774 ATAAAAGAAATAACA GCACCTA TAG TAGGTAC CTTTTATAGTTCACC accB 97491 - 98003 + | hypothetical protein fabZ 98023 - 98475 + | (3R)-hydroxymyristoyl-ACP dehydratase TERM 166 99502 - 99492 - g 76 -5.4 -5.01422 | overlap 99496 GGATATAAAAATAAA TGGA CAT TCCA TAGAATGCAGAATAA accC 98500 - 99843 + | biotin carboxylase TERM 167 100735 - 100714 - g 73 -4.5 -5.05505 | ACTATAAAGCAAAAA CTTCCTGAA GGAT TTCAAAAAG CAGAATTTCTACTAC accD 99964 - 100839 + | hypothetical protein TERM 168 100853 - 100881 + F 70 -6.3 -4.20516 | opp_overlap 100852 AATATTAAAAAATTG TTTATAATAAATT ACT ATTTTATTATAAA TTTGTTGGATGAAAG accA 100908 - 101753 + | hypothetical protein ftn 102350 - 101841 - | hypothetical protein CKL_0114 103718 - 102519 - | subtilisin related protease CKL_0115 104250 - 103819 - | hypothetical protein TERM 169 104392 - 104336 - R 100 -12.8 -3.14522 | gap 1, opp_overlap 104338 104339, overlap 104339 104346 TTAATGTAGACTTAA TTAGTTGAAAGACCATTCTCTGTAT TAAATAAC ATACAGAGAATAGTCTTTCAAC-AT TTAAATTTTTCCTTA TERM 170 104338 - 104391 + r 100 -15.7 -4.02315 | opp_overlap 104336 104339 104346, overlap 104339 AATGTAGACTTAATT AGTTGAAAGACCATTCTCTGTAT TAAATAAC ATACAGAGAATAGTCTTTCAACA TTTAAATTTTTCCTT TERM 171 104339 - 104390 + r 100 -19.2 -2.99762 | opp_overlap 104339 104336 104346, overlap 104338 ATGTAGACTTAATTA GTTGAAAGACCATTCTCTGTAT TAAATAAC ATACAGAGAATAGTCTTTCAAC ATTTAAATTTTTCCT TERM 172 104390 - 104339 - R 100 -21.4 -2.7736 | opp_overlap 104338 104339, overlap 104336 104346 ATGTAGACTTAATTA GTTGAAAGACCATTCTCTGTAT TAAATAAC ATACAGAGAATAGTCTTTCAAC ATTTAAATTTTTCCT TERM 173 104383 - 104346 - R 95 -12.3 -3.63895 | opp_overlap 104339 104338, overlap 104339 104336 CTTAATTAGTTGAAA GACCATTCTCTGTAT TAAATAAC ATACAGAGAATAGTC TTTCAACATTTAAAT CKL_0116 104865 - 104386 - | hypothetical protein TERM 174 105083 - 105067 - R 72 -6.7 -4.16943 | opp_overlap 105067 TTCTATATGGGAAAA TATACAT TAT ATGTATA TGAAGGGTAAGGCTT CKL_0117 105419 - 105174 - | hypothetical protein asnS 106839 - 105448 - | asparaginyl-tRNA synthetase TERM 175 105868 - 105842 - G 72 -8.8 -3.01712 | opp_overlap 105849, overlap 105846 TGTTCTGTTTGAAGA TCAATACCCCAT TCT ACTGGGTATTGA AAAGATGCCCCACTT TERM 176 106504 - 106521 + g 77 -9.9 -2.53271 | opp_overlap 106502, overlap 106503 106500 GTACTCAAGAGTATG CCTCTTC TTTT GAAGAGG GTATTCTGAAGATGA TERM 177 106879 - 106906 + r 100 -12.8 -3.34895 | opp_overlap 106879 ATGTTATTAATAAAA GTCTTTCATCCC TAAA GGGACGAAAGAC TTAATTCGCGGTACC TERM 178 106906 - 106879 - R 100 -15 -4.71828 | opp_overlap 106879 ATGTTATTAATAAAA GTCTTTCATCCC TAAA GGGACGAAAGAC TTAATTCGCGGTACC ogt 107703 - 107230 - | Ogt TERM 179 107331 - 107319 - G 77 -9.1 -3.35996 | opp_overlap 107317 107314 CATCCTTACCTATAA CCCTG TGA CAGGG GATAATTATACTTAT CKL_0120 109556 - 107742 - | hypothetical protein CKL_0121 113090 - 109596 - | exonuclease, sbcC related TERM 180 110170 - 110180 + gr 71 -5.4 -4.57787 | AATCTTGTATTTATA GAAG TTA CTTC TTTATTTAATGTTAT TERM 181 112725 - 112735 + gr 77 -4 -5.48787 | TACATTTTTAGACCC TTCT TCC AGAA TTTTTTCTATATTAT CKL_0122 114297 - 113053 - | exonuclease, sbcD related TERM 182 113756 - 113766 + gr 72 -2.6 -5.35354 | TAATTTTTACTTAAG TTAT GAA ATAA TTTTTTAATTCTGTC TERM 183 113780 - 113790 + gr 74 -4 -5.20331 | AATTTTTTAATTCTG TCAT TGT ATGA TTTTATTTGTTCTTT TERM 184 113941 - 113967 + gr 83 -8 -4.19506 | overlap 113955 TATTACTTTGTTATT TCCATAGTCACC CCT GGGAACTATGGA TTTTGGAGTTCCCAT TERM 185 114366 - 114338 - R 79 -9.7 -3.24091 | opp_overlap 114338, overlap 114336 114334 TAGAATTATAATACA CGCCACTAATA ATTCAGA TACTAGTGGCG TTCGTGTAAGTTTTT CKL_0123 114909 - 114409 - | hypothetical protein CKL_0124 115127 - 114966 - | hypothetical protein CKL_0125 115677 - 115111 - | hypothetical protein CKL_0126 116481 - 115693 - | hydrolase murA1 117766 - 116504 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 186 118128 - 118152 + r 86 -7.2 -5.13473 | opp_overlap 118128 CACATAAATTTAAAA CCCAGCTTTA AAAAA TAAAGCTAGG TTTTTTAAGTGTAAT TERM 187 118152 - 118128 - R 88 -9.4 -4.41177 | opp_overlap 118128 CACATAAATTTAAAA CCCAGCTTTA AAAAA TAAAGCTAGG TTTTTTAAGTGTAAT CKL_0128 118363 - 118199 - | hypothetical protein TERM 188 118370 - 118407 + H 72 -7.3 -3.93673 | gap 1, overlap 118371 ATTATTCATAATTTT ACCTGCTTA-TAGAAATA TCG TATTTTTAGTAAGCAGGA TTTGTCACCTCTTTC TERM 189 118371 - 118406 + H 86 -10.8 -2.95481 | gap 1, overlap 118370 TTATTCATAATTTTA CCTGCTTA-TAGAAATA TCG TATTTTTAGTAAGCAGG ATTTGTCACCTCTTT CKL_0129 118581 - 119126 + | hypothetical protein TERM 190 119168 - 119142 - T 100 -11 -4.45485 | opp_overlap 119142 ATTATATTTATAAAA CAGAGTAAGTTT TGT AGACTTACTCTG TTTTAAACATTAAAT TERM 191 119142 - 119168 + T 100 -13.2 -4.1466 | opp_overlap 119142 ATTATATTTATAAAA CAGAGTAAGTTT TGT AGACTTACTCTG TTTTAAACATTAAAT glnA 121076 - 119178 - | hypothetical protein TERM 192 119886 - 119872 - G 70 -7.2 -3.65199 | AATCTTGTACCTAAA GGATTT TCT AAATCC CTTACAACTCCTATA TERM 193 121707 - 121687 - g 75 -8.4 -3.57387 | overlap 121702 AATAGATTTGCGAAA GGCATATA GTAAA TATATGCC CATAGTAGGTATAGA TERM 194 121952 - 121938 - g 72 -7.2 -3.9407 | TGGAAGAAAAATTAA TTCCTT TAA AAGGAA ACGGAATCGCAGCAG murI 121424 - 122197 + | glutamate racemase TERM 195 122533 - 122521 - g 88 -3.3 -6.04324 | opp_overlap 122521 CTAAAAAAGAAAAAA TCCAG GTT CAGGA TGTTTGGAGTGAAGC CKL_0132 122259 - 122933 + | transcriptional regulator CKL_0133 123054 - 124853 + | methyl-accepting chemotaxis protein TERM 196 124901 - 124844 - T 100 -20.5 -3.66117 | opp_overlap 124844 124849 124862 124898, overlap 124842 124849 124862 CGAATTATATAAATA TAAAATATAATAAGAAAACTGGCTAGA GACA TTTGGCCAGTTTTCTTATTATATTTTA TATTAAATTCCCTGT TERM 197 124844 - 124901 + T 100 -24.9 -3.16117 | opp_overlap 124842 124844 124849 124862, overlap 124849 124862 124898 CGAATTATATAAATA TAAAATATAATAAGAAAACTGGCTAGA GACA TTTGGCCAGTTTTCTTATTATATTTTA TATTAAATTCCCTGT TERM 198 124896 - 124849 - T 100 -16 -4.87328 | opp_overlap 124844 124849 124862, overlap 124842 124844 124862 TATATAAATATAAAA TATAATAAGAAAACTGGCTAGA GACA TTTGGCCAGTTTTCTTATTATA TTTTATATTAAATTC TERM 199 124849 - 124896 + T 100 -20.4 -4.7033 | opp_overlap 124842 124849 124844 124862, overlap 124844 124862 TATATAAATATAAAA TATAATAAGAAAACTGGCTAGA GACA TTTGGCCAGTTTTCTTATTATA TTTTATATTAAATTC TERM 200 124862 - 124883 + T 85 -7.3 -4.99312 | opp_overlap 124862 124849 124844, overlap 124849 124844 AATATAATAAGAAAA CTGGCTAGA GACA TTTGGCCAG TTTTCTTATTATATT CKL_0134 125803 - 124904 - | iron-sulfur protein CKL_0135 126966 - 125926 - | hypothetical protein CKL_0136 127151 - 128251 + | hypothetical protein CKL_0137 128301 - 129221 + | iron-sulfur protein TERM 201 129321 - 129307 - g 77 -2.9 -5.61277 | opp_overlap 129307 TATAAAAAAAGAAAA GATTT TACAT AAATC TGTAATAGTAGTAGA comB 129260 - 129982 + | 2-phosphosulfolactate phosphatase TERM 202 129978 - 130021 + T 74 -6.1 -4.59846 | gap 1, opp_overlap 129979 129989, overlap 129979 129989 GTAATAAATTAATTT ATTGACAAAAACTCCAGCCC ATACA GCGCTGGAG-TTTAGTCAAG TTATTTTTATATAAT TERM 203 130020 - 129979 - T 75 -9.6 -2.65949 | gap 1, opp_overlap 129978 129979 129989, overlap 129989 TAATAAATTAATTTA TTGACAAAAACTCCAGCCC ATACA GCGCTGGAG-TTTAGTCAA GTTATTTTTATATAA TERM 204 129979 - 130020 + T 82 -9.6 -3.34281 | gap 1, opp_overlap 129979 129989, overlap 129978 129989 TAATAAATTAATTTA TTGACAAAAACTCCAGCCC ATACA GCGCTGGAG-TTTAGTCAA GTTATTTTTATATAA TERM 205 130011 - 129989 - T 95 -9.1 -4.88067 | opp_overlap 129979 129978 129989, overlap 129979 ATTTATTGACAAAAA CTCCAGCCC ATACA GCGCTGGAG TTTAGTCAAGTTATT TERM 206 129989 - 130011 + T 82 -9.1 -3.77607 | opp_overlap 129989 129979, overlap 129979 129978 ATTTATTGACAAAAA CTCCAGCCC ATACA GCGCTGGAG TTTAGTCAAGTTATT CKL_0139 130421 - 130017 - | hypothetical protein CKL_0140 131145 - 130453 - | hydrolase CKL_0141 132627 - 131284 - | hydrogenase TERM 207 132787 - 132742 - R 73 -4.3 -5.1356 | gap 1, opp_overlap 132744, overlap 132743 132744 132746 TTTTATGAATAAAAA GGTAGCTAAAACCTAAAAC-AT ACT ATCATTTTAGGCTTTAGCTATT TTTAATGAACATAGA TERM 208 132786 - 132743 - R 71 -7.8 -3.67413 | gap 1, opp_overlap 132744, overlap 132742 132744 132746 TTTATGAATAAAAAG GTAGCTAAAACCTAAAAC-AT ACT ATCATTTTAGGCTTTAGCTAT TTTTAATGAACATAG TERM 209 132744 - 132785 + r 83 -7.6 -4.72986 | opp_overlap 132743 132742 132744 132746 TTATGAATAAAAAGG TAGCTAAAACCTAAAA CATACTATCA TTTTAGGCTTTAGCTA TTTTTAATGAACATA TERM 210 132785 - 132744 - R 89 -11.3 -2.79725 | gap 1, opp_overlap 132744, overlap 132743 132742 132746 TTATGAATAAAAAGG TAGCTAAAACCTAAAAC-AT ACT ATCATTTTAGGCTTTAGCTA TTTTTAATGAACATA TERM 211 132783 - 132746 - R 77 -9.5 -2.93316 | gap 1, opp_overlap 132744, overlap 132744 132743 132742 ATGAATAAAAAGGTA GCTAAAACCTAAAAC-AT ACT ATCATTTTAGGCTTTAGC TATTTTTAATGAACA CKL_0142 133145 - 132825 - | hypothetical protein TERM 212 133129 - 133112 - G 72 -4.9 -4.89562 | TTAAAATCAAGAAAA TATCTAC AACG GCAGATA TTAAAAAATTTTTCA murC 134601 - 133228 - | UDP-N-acetylmuramate--L-alanine ligase CKL_0144 134894 - 135706 + | purine operon repressor TERM 213 135707 - 135734 + F 72 -5.8 -4.56597 | opp_overlap 135707 135716 TCTGGAAACATTTAA CTAATAAAATTT TCAA AAAATTTATTAG TTTTTCAAAAAACAA TERM 214 135975 - 135964 - g 72 -5.8 -4.3534 | opp_overlap 135963 TGCCAAGTAGGAAAA CTCC TGAT GGAG AGTTTAAGGATATTG CKL_0145 135810 - 136100 + | regulatory protein SpoVG TERM 215 136129 - 136098 - f 100 -14.8 -3.32268 | opp_overlap 136098 136107, overlap 136101 136107 GAAAAGGTAGAGGAA TAATAAAAAGGAGT AATT ACTCCTTTTTATTA TTTTCAGCTATTTTA TERM 216 136098 - 136129 + F 100 -14.8 -4.23434 | opp_overlap 136098 136101 136107, overlap 136107 GAAAAGGTAGAGGAA TAATAAAAAGGAGT AATT ACTCCTTTTTATTA TTTTCAGCTATTTTA TERM 217 136126 - 136101 - f 95 -12.1 -3.78436 | opp_overlap 136098 136107, overlap 136098 136107 AAGGTAGAGGAATAA TAAAAAGGAGT AATT ACTCCTTTTTA TTATTTTCAGCTATT TERM 218 136120 - 136107 - f 88 -6.7 -5.31855 | opp_overlap 136107 136098, overlap 136101 136098 GAGGAATAATAAAAA GGAGT AATT ACTCC TTTTTATTATTTTCA TERM 219 136107 - 136120 + F 91 -6.7 -5.4593 | opp_overlap 136101 136098 136107, overlap 136098 GAGGAATAATAAAAA GGAGT AATT ACTCC TTTTTATTATTTTCA gcaD 136256 - 137626 + | GcaD prs 137651 - 138610 + | Prs TERM 220 138607 - 138657 + F 70 -6.3 -4.1466 | opp_overlap 138614, overlap 138620 TAAATTATTCGAAGA TTAATAATATAGAGGCATGTGGA AATAA TCCACATGCCTTTATAGCGGTGA TTTTGAGACTTAGGT TERM 221 138650 - 138614 - f 100 -15.4 -3.82084 | opp_overlap 138607 138620 TTCGAAGATTAATAA TATAGAGGCATGTGGA AATAA TCCACATGCCTTTATA GCGGTGATTTTGAGA TERM 222 138620 - 138644 + F 100 -14.4 -3.88559 | opp_overlap 138614, overlap 138607 GATTAATAATATAGA GGCATGTGGA AATAA TCCACATGCC TTTATAGCGGTGATT CKL_0148 139094 - 139780 + | sensory transduction protein CKL_0149 139781 - 141196 + | sensory transduction histidine kinase CKL_0150 141277 - 142467 + | serine protease TERM 223 142459 - 142503 + F 70 -3.1 -5.23316 | opp_overlap 142460 142465 142468 142472, overlap 142465 142472 TCTGAAAATAAAGAA AGCGAATAATAAAGAGACT ATATGTA AGTCTCTTTATTATTTATG TTTTTTAGTATAATA TERM 224 142502 - 142460 - f 71 -4.4 -4.8743 | opp_overlap 142459 142465 142472, overlap 142465 142468 142472 CTGAAAATAAAGAAA GCGAATAATAAAGAGACT ATATGTA AGTCTCTTTATTATTTAT GTTTTTTAGTATAAT TERM 225 142497 - 142465 - f 90 -10.9 -3.44318 | opp_overlap 142459 142465 142472, overlap 142460 142468 142472 AATAAAGAAAGCGAA TAATAAAGAGACT ATATGTA AGTCTCTTTATTA TTTATGTTTTTTAGT TERM 226 142465 - 142497 + F 100 -10.9 -4.66347 | opp_overlap 142465 142460 142468 142472, overlap 142459 142472 AATAAAGAAAGCGAA TAATAAAGAGACT ATATGTA AGTCTCTTTATTA TTTATGTTTTTTAGT TERM 227 142494 - 142468 - f 76 -8.2 -3.8253 | opp_overlap 142465 142459 142472, overlap 142465 142460 142472 AAAGAAAGCGAATAA TAAAGAGACT ATATGTA AGTCTCTTTA TTATTTATGTTTTTT pth 142562 - 143125 + | peptidyl-tRNA hydrolase TERM 228 143148 - 143181 + F 93 -11.3 -3.86995 | gap 1, opp_overlap 143148 TAATGTTACTTCAAA CCGTTTAGTTTCTTTA ATA TAGAGAAACT-AACGG TTATTGTGCGTTTGA TERM 229 143181 - 143148 - f 80 -9.1 -3.61103 | gap 1, opp_overlap 143148 TAATGTTACTTCAAA CCGTTTAGTTTCTTTA ATA TAGAGAAACTA-ACGG TTATTGTGCGTTTGA mfd 143233 - 146754 + | hypothetical protein TERM 230 147528 - 147510 - g 77 -9 -3.26164 | AGATGATGGAGAAGA TTTTGCAA AAG TTGCAAAA GAAGTGTCACAAGAT TERM 231 147659 - 147643 - g 93 -10.1 -4.25256 | CTCGCATTAAAAGAA GGTGCCA TAT CGGCACC AGTTAAAAGTAGTTT prsA 146830 - 147855 + | peptidylprolyl isomerase TERM 232 147948 - 147989 + F 89 -6.2 -5.42265 | overlap 147949 147958 TTTAGAATAAAAAGC TTTGAAAGAACTGTAGTA TTGTAT TATTACAGTTTTTTTAAG TTTTTTCTAATTTAA TERM 233 147949 - 147988 + F 73 -7.5 -3.83732 | overlap 147948 147958 TTAGAATAAAAAGCT TTGAAAGAACTGTAGTA TTGTAT TATTACAGTTTTTTTAA GTTTTTTCTAATTTA TERM 234 147958 - 147979 + F 80 -3.8 -5.63857 | overlap 147949 147948 AAAGCTTTGAAAGAA CTGTAGTA TTGTAT TATTACAG TTTTTTTAAGTTTTT CKL_0154 148091 - 148642 + | stage V sporulation protein T TERM 235 148667 - 148649 - f 75 -8.8 -3.45756 | opp_overlap 148650, overlap 148647 148650 GAACAATAGATAATA GTGGCAGC AAA GCTGCCAT TTTATTTTTATCCCT TERM 236 148666 - 148650 - f 93 -12.3 -2.66369 | opp_overlap 148650, overlap 148649 148647 AACAATAGATAATAG TGGCAGC AAA GCTGCCA TTTTATTTTTATCCC TERM 237 148650 - 148666 + F 100 -12.3 -5.35224 | opp_overlap 148650 148649 148647 AACAATAGATAATAG TGGCAGC AAA GCTGCCA TTTTATTTTTATCCC TERM 238 149558 - 149542 - g 80 -9.5 -3.47227 | opp_overlap 149541 149540 CTGTAAGCAGCATAA TGAGTCT TAT AGACTCA GCTTTGGTACCCCAA CKL_0155 148812 - 150347 + | stage V sporulation protein B CKL_0156 150361 - 151809 + | hypothetical protein TERM 239 152139 - 152116 - f 71 -7 -3.72893 | opp_overlap 152116 152116 152121, overlap 152121 CATTTGTTGATTAAA TTAAATTTTA ATTT TAAAATTTAA TTTAAGAATAGCCAA hup 152224 - 152499 + | Hup TERM 240 152517 - 152536 + F 100 -10 -4.68645 | opp_overlap 152516 152517 TAGTTTATACAAAAC GCCTGGAT GAAA ATCCGGGC TTTTCCTTTTAAATG CKL_0158 152597 - 152842 + | hypothetical protein CKL_0159 152906 - 153196 + | hypothetical protein TERM 241 153426 - 153451 + G 74 -8.5 -3.26712 | opp_overlap 153426 153425 153428, overlap 153422 TTACTTTATACTAAT TATGCATATAT GGGC ATGTATGCATA TGTATTATTAGCAGT CKL_0160 153228 - 153638 + | hypothetical protein CKL_0161 153766 - 154038 + | hypothetical protein CKL_0162 154218 - 154628 + | hypothetical protein TERM 242 154639 - 154661 + F 95 -11.4 -4.32669 | opp_overlap 154643, overlap 154643 ATTAGTAAAGTAGGT TAAAGAGGCG AGG TGCCTCTTTA TTATTTTGTGAGATT TERM 243 154643 - 154657 + F 83 -7.8 -4.72617 | opp_overlap 154643, overlap 154639 GTAAAGTAGGTTAAA GAGGCG AGG TGCCTC TTTATTATTTTGTGA TERM 244 155286 - 155305 + F 100 -10.8 -5.02439 | TTTCCGCTACCAGTA GCTTGCAA ATTT TTGCAAGC TTTTTATGATTATAT CKL_0169 155543 - 157930 + | stage II sporulation protein E tilS 158110 - 159498 + | TilS TERM 245 159682 - 159696 + G 88 -8.6 -4.41241 | opp_overlap 159681 TAGAGAAATAACTAT TCCATG TAG CATGGA TTTTATGGCGGTTTC hpt 159503 - 160048 + | hypothetical protein TERM 246 160480 - 160490 + G 71 -5.4 -4.68919 | TTCTTTTAATACTTA TGCT TGT AGCA TTTTGGTTTATGTTT ftsH1 160131 - 161933 + | FtsH1 TERM 247 162215 - 162161 - g 100 -15.4 -3.10894 | opp_overlap 162159 162181 162183 ATTAGGATCAGGTAA TTTAGATGTATTTGCCACACCAGCTA TGA TAGCTCTTATGGAAAATACATCTAAA AATAGTGTAGATCTT CKL_0173 162072 - 162455 + | hypothetical protein CKL_0174 162607 - 163386 + | pantothenate kinase dus 163395 - 164357 + | Dus CKL_0176 164418 - 165239 + | hypothetical protein TERM 248 165232 - 165259 + F 72 -5.8 -4.48175 | opp_overlap 165232 ATAAAAATGTATTAA TATTATAGATAT ATTG AAATCTATAATA TTTTAATTAAATTTT TERM 249 165744 - 165767 + G 78 -9.6 -3.21925 | overlap 165746 TAGAATACTTAATTG TGGGGTCTGC GGAA GCAGATCCTA TTAATAATAAAATAT TERM 250 165746 - 165765 + G 81 -10 -3.17229 | overlap 165744 GAATACTTAATTGTG GGGTCTGC GGAA GCAGATCC TATTAATAATAAAAT greA1 165416 - 165895 + | GreA1 TERM 251 166251 - 166237 - g 76 -7.2 -4.31 | TTAAAGGAATATAAA TCCTAT GAT ATAGGA GACATTTTATCTGTA lysS 165913 - 167421 + | lysyl-tRNA synthetase glyS 167965 - 169356 + | glycyl-tRNA synthetase TERM 252 169361 - 169416 + F 78 -4.4 -5.50774 | gap 1, overlap 169362 169398 TACAGTTTTAATAGG T-GTATCATGTTAATTTTATTATCTTT ATA AGAGACAGTGAAATTGGCATGATGCTA TTTTTATTTATTATC TERM 253 169362 - 169414 + F 88 -9.5 -4.35561 | overlap 169361 169398 ACAGTTTTAATAGGT GTATCATGTTAATTTTATTATCTTT ATA AGAGACAGTGAAATTGGCATGATGC TATTTTTATTTATTA TERM 254 169481 - 169516 + F 73 -7.6 -3.78953 | opp_overlap 169487, overlap 169491 ATAAGTATTCTACAG CAAAAATTTACCGGAC TTTC GTCCGGTAAATTAGGG TTTAATCATGGGGAT TERM 255 169510 - 169487 - f 100 -14 -4.80882 | opp_overlap 169481 169491 ATTCTACAGCAAAAA TTTACCGGAC TTTC GTCCGGTAAA TTAGGGTTTAATCAT TERM 256 169491 - 169506 + F 81 -10.4 -2.56046 | opp_overlap 169487, overlap 169481 TACAGCAAAAATTTA CCGGAC TTTC GTCCGG TAAATTAGGGTTTAA murD 169982 - 171358 + | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase TERM 257 171380 - 171408 + F 88 -5.4 -5.64421 | opp_overlap 171380 GAGGGTATTTTAAAA GAAAGACTAACT TTTAC AGTAAGTTTTTC TTTTTTATTTAGAGT TERM 258 171585 - 171599 + F 71 -7.2 -3.87373 | AAATGTCATTAAGTT CATAAG TGG CTTATG TTTATGAAAAATATA TERM 259 172580 - 172561 - f 71 -7.8 -3.64371 | gap 1, overlap 172563 AAGTGAGATGTGAAA GACCCGGGC TTA ACCCGGG-C AGTGCATTTCAAACT TERM 260 172579 - 172563 - f 93 -11.5 -3.39844 | overlap 172561 GTGAGATGTGAAAGA CCCGGGC TTA ACCCGGG CAGTGCATTTCAAAC TERM 261 173475 - 173456 - f 73 -9.2 -2.65808 | opp_overlap 173459 173462, overlap 173453 173468 AGTCGTAACAAGGTA GCCGTAGG AGAA CCTGCGGC TGGATCACCTCCTTT TERM 262 173972 - 173995 + F 72 -6.2 -4.27617 | TAACCTTTGTAGTAG TAAGTATAAA TGAG TTTATGCTTA TTTTAATAAGATGTA TERM 263 174217 - 174195 - f 80 -8.5 -3.90856 | gap 1, opp_overlap 174190, overlap 174199 AATTTTTTAATGAAA CTCACTCAGC TAAG GCTGAG-GAG TGCAATTTAGGCACC TERM 264 174214 - 174199 - f 73 -9 -2.70979 | opp_overlap 174190, overlap 174195 TTTTAATGAAACTCA CTCAGC TAAG GCTGAG GAGTGCAATTTAGGC TERM 265 174549 - 174532 - f 86 -9.9 -3.695 | GGGAAAGAGCCCAAA CCGGAAA CTTG TTTCCGG GGTAGAGGTCAGGTG TERM 266 174715 - 174700 - f 81 -10.4 -2.71011 | ACCTTGTGGGAAGCA GGGAGG ACCA CCTCCC AAGGCTAAATACTAC TERM 267 174789 - 174778 - f 75 -7.2 -4.2354 | GAAAGGTGAAAAGAA CCCC GGGA GGGG AGTGAAATAGAACCT TERM 268 174842 - 174855 + F 71 -4.5 -4.82901 | opp_overlap 174842 TCGAAGTACGTTAAA GTACG ACGG CGTGC TTTTTGTAGAACGAG TERM 269 177554 - 177575 + F 100 -11.7 -5.56264 | opp_overlap 177554 TTATCTCCACCAAAA CGAGTAACA ATTT TGTTACTCG TTTTTTATATTTAGA TERM 270 177575 - 177554 - f 100 -11.7 -4.26076 | opp_overlap 177554 TTATCTCCACCAAAA CGAGTAACA ATTT TGTTACTCG TTTTTTATATTTAGA TERM 271 178836 - 178860 + G 70 -4.3 -4.86385 | opp_overlap 178835 178837 178839, overlap 178837 AGTTACAATTAAGAT AGATGAAAAAG AAC CTTTTTCAGCA TTTGTTTTTAAGACT TERM 272 178837 - 178859 + G 71 -7.8 -3.50746 | opp_overlap 178837 178835 178839, overlap 178836 GTTACAATTAAGATA GATGAAAAAG AAC CTTTTTCAGC ATTTGTTTTTAAGAC TERM 273 178857 - 178839 - g 74 -9 -3.16218 | opp_overlap 178837 178836, overlap 178837 178835 TACAATTAAGATAGA TGAAAAAG AAC CTTTTTCA GCATTTGTTTTTAAG TERM 274 179422 - 179392 - g 90 -4.8 -5.75599 | opp_overlap 179377 GAAACTATAAAAAAA GTTTCTGATGTACA AGG TAAACATAAGAAAC AGTCTGGGGGACACG fusA1 177937 - 180027 + | elongation factor G TERM 275 180046 - 180080 + F 88 -7.9 -4.82855 | opp_overlap 180047, overlap 180047 AAAGCTTGAAGAAGA AGACTGTTGCGCTGA AAAAA TTAGTGCAGCAGTCC TTTTTAAGTTTAGTA TERM 276 180047 - 180079 + F 93 -11.4 -3.48629 | opp_overlap 180047, overlap 180046 AAGCTTGAAGAAGAA GACTGTTGCGCTGA AAAAA TTAGTGCAGCAGTC CTTTTTAAGTTTAGT TERM 277 180377 - 180363 - g 79 -8.6 -3.92178 | ATTAGTTCAAGTAAA GTTTCC GAT GGAAAC AGACATTGTATAAGA CKL_0190 180174 - 180413 + | hypothetical protein cobC1 180513 - 181148 + | CobC1 TERM 278 181182 - 181228 + F 89 -10 -3.79505 | opp_overlap 181182 AAATATGGGGAAAAA TATATTTAAATTTGGTATTT GATTAAA AAATACTGAATTTAAATATA TTTGAATGTTGATTT TERM 279 181228 - 181182 - f 72 -5.6 -4.62904 | opp_overlap 181182 AAATATGGGGAAAAA TATATTTAAATTTGGTATTT GATTAAA AAATACTGAATTTAAATATA TTTGAATGTTGATTT CKL_0192 181307 - 181792 + | transcriptional regulator TERM 280 181801 - 181823 + F 76 -8 -3.74077 | opp_overlap 181796, overlap 181806 TAGATAAATATGTGA TATAATATTA TTA TAATATTATA TTTACATGTGTGGGA CKL_0193 181847 - 182395 + | hypothetical protein TERM 281 182570 - 182527 - g 100 -7.8 -5.46129 | opp_overlap 182538 GAAGAAAGTAAAAAA GTAATTAAAAATGTAGAAAA TGCC TTTTATACATTTTCAAATAC GGAGGAAAAGTTTAA CKL_0194 182398 - 183435 + | ATP:guanido phosphotransferase TERM 282 183944 - 183929 - g 82 -4.7 -5.42198 | opp_overlap 183941 TTCTAAAAAAGAAAA TGGAG AGCCTA CTCCA ACCTTGGATCAATTT clpC 183456 - 185894 + | ClpC TERM 283 186001 - 185974 - f 91 -6.6 -5.42862 | opp_overlap 185955 185974 185995 185997, overlap 185960 185995 185997 ATAGTTTTAAAAAAA TTATATAATTTT TCAC AAAACTATATAA TTATACTGTATAATT TERM 284 185997 - 186019 + F 71 -8 -3.31726 | opp_overlap 185974 185995 185997 186002 186016, overlap 185974 185995 186002 TTTTTCACAAAACTA TATAATTATA CTG TATAATTATA TCTTATATAGGAGGA TERM 285 186019 - 185997 - f 71 -8 -3.1733 | opp_overlap 185974 185997 185995 186002, overlap 185974 185995 186002 186016 TTTTTCACAAAACTA TATAATTATA CTG TATAATTATA TCTTATATAGGAGGA radA 186044 - 187399 + | DNA repair protein RadA CKL_0197 187414 - 188478 + | DNA integrity scanning protein DisA TERM 286 188472 - 188514 + T 100 -16.8 -3.48593 | opp_overlap 188473 188486, overlap 188473 188486 TATGATAGATAATAA ATTTTAGCACAAAATAATAT TAA ATATTATTTTGTGCTAAAAA TTATCTAAAAGAATA TERM 287 188473 - 188513 + T 100 -20.3 -2.68942 | opp_overlap 188473 188486, overlap 188472 188486 ATGATAGATAATAAA TTTTAGCACAAAATAATAT TAA ATATTATTTTGTGCTAAAA ATTATCTAAAAGAAT TERM 288 188513 - 188473 - T 100 -20.3 -4.43576 | opp_overlap 188473 188472 188486, overlap 188486 ATGATAGATAATAAA TTTTAGCACAAAATAATAT TAA ATATTATTTTGTGCTAAAA ATTATCTAAAAGAAT CKL_0198 188916 - 188515 - | hypothetical protein TERM 289 189248 - 189225 - H 71 -7 -3.78736 | opp_overlap 189225 189229, overlap 189229 189245 GATATATTGATTAAA TAAATTATTT AAGT AAATAATTTA TTAAATAAAACTAGT CKL_0199 189350 - 190477 + | hypothetical protein TERM 290 190609 - 190598 - g 73 -4.4 -5.03314 | opp_overlap 190583 TGTATTTTCAAAAAA TCCA TTAG TGGA TAAAATTGTATTAGT TERM 291 190942 - 190975 + G 74 -6.9 -4.17789 | TAAGGAAGGAATTAT TTATAGTTCAAACGC CCCA GTGTTTTGACTATAA TTTAATTTATGATTG ispD 190467 - 191162 + | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase TERM 292 192259 - 192275 + G 71 -8.1 -3.25084 | overlap 192258 TATGTTATCCGGTCA TTATAGG ACT CCTATAA ATTTTAGTATTGAAC cysS 191375 - 192772 + | cysteinyl-tRNA synthetase CKL_0202 192806 - 193231 + | hypothetical protein TERM 293 193609 - 193619 + G 79 -6.8 -4.60977 | opp_overlap 193609 193607, overlap 193607 TATGCCTCAGAAAGA GGAG AAT CTCC TTTTATAATTATATT TERM 294 193699 - 193676 - g 77 -8.2 -3.8211 | opp_overlap 193679, overlap 193679 TTGGAGCTATAATAA GAACTGCAGA GGTA TCTGGAGTTC ATGGAATTATAATAC CKL_0203 193240 - 194082 + | methyltransferase CKL_0204 194079 - 194591 + | hypothetical protein rpoD1 194669 - 195307 + | RNA polymerase factor sigma-70 TERM 295 195573 - 195552 - f 71 -8.1 -3.31263 | gap 1, overlap 195554 AGTTCAGTGGTAGAA CA-CCAGCTT CCC AAGCTGGCTG TCGCGGGTTCGAGTC TERM 296 195570 - 195554 - f 90 -10.9 -3.22475 | overlap 195552 TTCAGTGGTAGAACA CCAGCTT CCC AAGCTGG CTGTCGCGGGTTCGA tuf1 195777 - 196970 + | elongation factor Tu TERM 297 196980 - 197002 + F 91 -10.6 -4.13014 | opp_overlap 196983 GAATAAGTGTGTTAA GGACTGGGTT CTA GACCTAGTCC TTTTGAAAGTGTAGA rpmG 197204 - 197353 + | hypothetical protein secE 197397 - 197627 + | hypothetical protein nusG 197676 - 198197 + | transcription antitermination protein NusG rplK 198279 - 198704 + | hypothetical protein rplA 198763 - 199452 + | hypothetical protein TERM 298 199581 - 199604 + F 78 -6 -4.84033 | TATAAAGTAAAGGTG GTCTCTCTGT GTCT ATAGGGAGGC TTTTGATTTTTATAT rplJ 199620 - 200165 + | 50S ribosomal protein L10 rplL 200196 - 200567 + | hypothetical protein TERM 299 200582 - 200622 + F 91 -10 -4.34771 | opp_overlap 200590, overlap 200583 AAAATTAATAATATG TTATAAAAGAGGTGCTTT AATAC AAAGTACCTCTTTAATAG TTTTAATAAATTTTG TERM 300 200583 - 200621 + F 93 -11.3 -3.19778 | opp_overlap 200590, overlap 200582 AAATTAATAATATGT TATAAAAGAGGTGCTTT AATAC AAAGTACCTCTTTAATA GTTTTAATAAATTTT TERM 301 200614 - 200590 - f 78 -7.9 -4.42619 | opp_overlap 200583 200582 TAATATGTTATAAAA GAGGTGCTTTA ATA CAAAGTACCTC TTTAATAGTTTTAAT TERM 302 203265 - 203252 - g 84 -5.3 -5.43866 | GAACTTGTAAAAAAA GATGT ATTT ACATC AATTCACATAGAGGA TERM 303 203958 - 203943 - g 72 -4.7 -4.74706 | opp_overlap 203932, overlap 203933 203946 GGGAAGATGGAAAAA CCATC CTATAT GATGG GAGAACGGGAGAACC rpoB 200861 - 204565 + | DNA-directed RNA polymerase subunit beta TERM 304 205458 - 205445 - g 74 -5.3 -4.76088 | GAAATGAAAAAAGAA TGCTT CAGG AAGCA GTGGATGCTCTTATA TERM 305 205916 - 205930 + G 72 -8.6 -3.14848 | overlap 205915 ATCCACTATCTTGTA CAGCAT ATA ATGCTG ATTTTGATGGAGACC rpoC 204583 - 208107 + | DNA-directed RNA polymerase subunit beta' TERM 306 208167 - 208193 + F 86 -11 -2.94726 | opp_overlap 208169 208171, overlap 208163 208161 208169 CTGTATGTTTTTTAA GAGACAAAGCAT TAC ATACTTTGTCTC TATAGTATTGTAGGA TERM 307 208191 - 208169 - f 81 -10 -3.02144 | opp_overlap 208169 208167 208163 208161, overlap 208171 GTATGTTTTTTAAGA GACAAAGCAT TAC ATACTTTGTC TCTATAGTATTGTAG CKL_0218 208220 - 208459 + | ribosomal protein L7Ae-like protein TERM 308 208941 - 208912 - g 77 -8.8 -3.57918 | opp_overlap 208919 AGGTATAGGACATAA CTTACAAGAACA TAGTGT TGTTCTTATAAG AGGAGGAAGAGTTAA rpsL 208694 - 209071 + | 30S ribosomal protein S12 rpsG 209216 - 209686 + | 30S ribosomal protein S7 TERM 309 209696 - 209721 + F 80 -7.7 -4.46581 | opp_overlap 209696 TATTAATATTCGAAA CTGTTTTGGTA ATTT TACTAAAGCAG TTTTATCAAATTTTA fusA2 209765 - 211831 + | elongation factor G tuf2 211876 - 213069 + | elongation factor Tu TERM 310 213132 - 213113 - f 95 -10.8 -4.26076 | opp_overlap 213113 213109 GCATTTTGATGAAAA GGAAAGAG GCAG CTCTTTCC TTAATTTAAGCAGTT TERM 311 213113 - 213132 + F 90 -10.8 -3.51976 | opp_overlap 213113, overlap 213109 GCATTTTGATGAAAA GGAAAGAG GCAG CTCTTTCC TTAATTTAAGCAGTT rpsJ 213435 - 213743 + | 30S ribosomal protein S10 rplC 213831 - 214460 + | 50S ribosomal protein L3 rplD 214485 - 215105 + | 50S ribosomal protein L4 rplW 215105 - 215401 + | hypothetical protein rplB 215460 - 216293 + | 50S ribosomal protein L2 TERM 312 216296 - 216319 + F 80 -9 -3.54408 | opp_overlap 216295 216302, overlap 216297 GAATAAAAAGTAATT TGAAGAGAAT ACAC ATTCTCTTCG TTGATTTAAGTAAAA TERM 313 216297 - 216318 + F 81 -10.3 -2.72324 | opp_overlap 216295 216302, overlap 216296 AATAAAAAGTAATTT GAAGAGAAT ACAC ATTCTCTTC GTTGATTTAAGTAAA TERM 314 216462 - 216450 - g 85 -4.8 -5.56568 | AGATCAGTAAAAAAA GGAC CTTAT GTCC AAGAATCACTTTTAA rpsS 216429 - 216716 + | 30S ribosomal protein S19 rplV 216740 - 217075 + | 50S ribosomal protein L22 TERM 315 217744 - 217730 - g 75 -5 -5.00616 | CTTCCTGTCAAAAAA CCTGTT GAG AACAAG GAAGAAGCTAAAGCA rpsC 217091 - 217762 + | 30S ribosomal protein S3 rplP 217780 - 218223 + | 50S ribosomal protein L16 rpmC 218213 - 218428 + | hypothetical protein rpsQ 218448 - 218702 + | hypothetical protein rplN 218728 - 219096 + | 50S ribosomal protein L14 rplX 219115 - 219432 + | 50S ribosomal protein L24 rplE 219456 - 220001 + | 50S ribosomal protein L5 rpsN 220014 - 220199 + | 30S ribosomal protein S14 rpsH 220232 - 220630 + | 30S ribosomal protein S8 rplF 220707 - 221249 + | 50S ribosomal protein L6 rplR 221268 - 221627 + | 50S ribosomal protein L18 rpsE 221645 - 222142 + | 30S ribosomal protein S5 rpmD 222155 - 222334 + | 50S ribosomal protein L30 rplO 222358 - 222798 + | hypothetical protein secY 222800 - 224080 + | preprotein translocase subunit SecY TERM 316 224225 - 224215 - g 74 -4 -5.252 | TATTTTTAGAAAAAA TATC TCA GATA AGACTCCTCTTGGAA adk 224102 - 224755 + | adenylate kinase map1 224752 - 225501 + | Map1 infA 225603 - 225821 + | hypothetical protein rpmJ 225839 - 225952 + | hypothetical protein rpsM 226138 - 226509 + | RpsM rpsK 226527 - 226925 + | 30S ribosomal protein S11 rpsD1 226948 - 227568 + | 30S ribosomal protein S4 rpoA 227634 - 228581 + | DNA-directed RNA polymerase subunit alpha TERM 317 228690 - 228700 + G 76 -5.4 -5.00616 | opp_overlap 228690 GCGATGTTAAGAAAT CTAG TCA CTAG TTTTTTAAAGCACGG rplQ 228630 - 228971 + | 50S ribosomal protein L17 TERM 318 228977 - 229005 + F 75 -5.3 -4.96848 | opp_overlap 228975 228979, overlap 228979 GTTAGTATAAAATTT AAGGGTTAAGTAA AGC TAGCTTAACCCTG TTTTTATATAGAACA TERM 319 228979 - 229003 + F 77 -7.9 -4.11141 | opp_overlap 228975 228979, overlap 228977 TAGTATAAAATTTAA GGGTTAAGTAA AGC TAGCTTAACCC TGTTTTTATATAGAA CKL_0254 229102 - 229947 + | cobalt transporter ATP-binding subunit CKL_0255 229932 - 230786 + | cobalt transporter ATP-binding subunit CKL_0256 230799 - 231611 + | transporter protein truA 231608 - 232342 + | hypothetical protein rplM 232521 - 232955 + | 50S ribosomal protein L13 rpsI 232981 - 233373 + | 30S ribosomal protein S9 TERM 320 233392 - 233421 + F 95 -11.7 -3.80733 | opp_overlap 233397, overlap 233397 GTATAAATTTTCAAG TAAAAGAGTTACA GAAG TGTGACTCTTTTA TTGTTGTACAATAAA TERM 321 233397 - 233416 + F 85 -7.2 -4.95547 | opp_overlap 233397, overlap 233392 AATTTTCAAGTAAAA GAGTTACA GAAG TGTGACTC TTTTATTGTTGTACA CKL_0260 233560 - 233937 + | transposase CKL_0261 235622 - 233943 - | hypothetical protein TERM 322 234344 - 234358 + g 71 -2.1 -5.40072 | gap 1, overlap 234342 234341 TAATCAGTTCATTCA GCC-GT ATCG ACTGGC TTTTTTTGAGCGGAG TERM 323 234589 - 234577 - G 77 -9.1 -3.28791 | ATTGCCCGGCCACAA TCCGC ACA GCGGA GAAAGCCGCTAAACA TERM 324 235753 - 235724 - R 100 -17.3 -2.64422 | gap 1, overlap 235714 AGATAGCTGATATTA CCGACTTCGGGCCA AGT TGGCCCGAAGT-GG CATGACCGATTACAG CKL_0262 236092 - 235763 - | hypothetical protein TERM 325 236128 - 236096 - R 76 -7.1 -4.37506 | opp_overlap 236096 236092 236090 ATGAGGAAACATAAA CAGTCACCACTTT ATAAGCA AAAGTGATGGCTG TTAATCTTTCCTCAT CKL_0263 236368 - 236168 - | hypothetical protein CKL_0264 237243 - 236824 - | hypothetical protein TERM 326 237421 - 237393 - R 100 -6.1 -5.75478 | gap 1 AAGGATACAAAAAAA CACCTTT-ACGC AAATTA GCGCGAAAGGTG TCGAATAAAAAATGG TERM 327 237452 - 237434 - R 95 -7.4 -5.4505 | GTGTCGAATAAAAAA TGGGCG CAATAGC CGCCCA CAAGTTGATATAATA TERM 328 237696 - 237743 + r 75 -9.4 -2.65942 | gap 1, opp_overlap 237699, overlap 237694 AAAATTGTTATATGA AAAGAGCCGATAATCAA-GAG ATATGTA CTCATTGATTATCGGCTCTGC GTCTTTGCGTCTGGC TERM 329 237740 - 237699 - R 100 -15.5 -4.3467 | gap 1, opp_overlap 237696 237694 ATTGTTATATGAAAA GAGCCGATAATCAA-GAG ATATGTA CTCATTGATTATCGGCTC TGCGTCTTTGCGTCT CKL_0265 237919 - 237731 - | hypothetical protein CKL_0266 238206 - 237949 - | hypothetical protein CKL_0267 239023 - 238160 - | adenylyltransferase CKL_0268 239910 - 239077 - | histidinol-phosphatase-related protein CKL_0269 241084 - 239924 - | transporter protein TERM 330 240466 - 240431 - G 74 -9.2 -3.00525 | overlap 240434 CTGTTCCAAAGCACA GTAGCAAAAGAAACAA AGCA TTACTTCTTTTGCTCC AGAAATCTGAATTAC TERM 331 240463 - 240434 - G 74 -9.5 -2.7314 | overlap 240431 TTCCAAAGCACAGTA GCAAAAGAAACAA AGCA TTACTTCTTTTGC TCCAGAAATCTGAAT CKL_0270 241196 - 242092 + | transcriptional regulator TERM 332 242102 - 242070 - T 100 -16.5 -2.78384 | opp_overlap 242070 242074 242076, overlap 242046 242076 CCCCTTTGGAGTACA GAAAAAGGGATCAGC AAT GCTAATCCCTCTTTC TAATGTAATGAAAAG TERM 333 242070 - 242102 + T 93 -12.1 -2.66316 | opp_overlap 242046 242070 242076, overlap 242074 242076 CCCCTTTGGAGTACA GAAAAAGGGATCAGC AAT GCTAATCCCTCTTTC TAATGTAATGAAAAG TERM 334 242074 - 242098 + T 72 -7.1 -4.03078 | opp_overlap 242070 242076, overlap 242070 242076 TTTGGAGTACAGAAA AAGGGATCAGC AAT GCTAATCCCTC TTTCTAATGTAATGA TERM 335 242076 - 242096 + T 84 -9.7 -3.60505 | opp_overlap 242070 242076, overlap 242074 242070 TGGAGTACAGAAAAA GGGATCAGC AAT GCTAATCCC TCTTTCTAATGTAAT TERM 336 242096 - 242076 - T 100 -11.9 -5.00895 | opp_overlap 242076 242074 242070, overlap 242070 TGGAGTACAGAAAAA GGGATCAGC AAT GCTAATCCC TCTTTCTAATGTAAT CKL_0271 242597 - 242175 - | hypothetical protein CKL_0272 243152 - 242628 - | nitroreductase-related protein TERM 337 243254 - 243215 - H 71 -8.8 -2.91383 | opp_overlap 243226, overlap 243226 ACCCGCATTGATAGA TGTCAACAAAATGCGAAT AATG ATTCACATTTCATTGACC TGATTTAAAGTTCCA TERM 338 243243 - 243226 - H 70 -4.9 -4.66987 | opp_overlap 243226, overlap 243215 TAGATGTCAACAAAA TGCGAAT AATG ATTCACA TTTCATTGACCTGAT CKL_0273 243295 - 243891 + | transcriptional regulator TERM 339 244041 - 244070 + T 81 -10.1 -3.01924 | opp_overlap 244040 244042 244043 CTTTCAGACGTAAAG ATGGCGTAAGAAA TTGC TTTCTTACGCCGG TATTAGCCACAGGTC TERM 340 244069 - 244042 - T 93 -11.4 -3.43773 | opp_overlap 244041, overlap 244040 244043 TTTCAGACGTAAAGA TGGCGTAAGAAA TTGC TTTCTTACGCCG GTATTAGCCACAGGT TERM 341 244068 - 244043 - T 100 -14.9 -2.65942 | opp_overlap 244041, overlap 244042 244040 TTCAGACGTAAAGAT GGCGTAAGAAA TTGC TTTCTTACGCC GGTATTAGCCACAGG TERM 342 244301 - 244326 + T 77 -6.1 -4.7657 | opp_overlap 244302, overlap 244302 244322 CGCTAACCCGCAAGC AGGGCAAGTGT ATTG ACACTTGCACA TTTTTAAGATTTTTC TERM 343 244302 - 244325 + T 82 -9.6 -3.44315 | opp_overlap 244302, overlap 244301 244322 GCTAACCCGCAAGCA GGGCAAGTGT ATTG ACACTTGCAC ATTTTTAAGATTTTT TERM 344 244325 - 244302 - T 75 -9.6 -2.73542 | opp_overlap 244302 244301 244322 GCTAACCCGCAAGCA GGGCAAGTGT ATTG ACACTTGCAC ATTTTTAAGATTTTT TERM 345 244322 - 244366 + T 74 -8.2 -3.61398 | gap 1, opp_overlap 244302 244365, overlap 244302 244301 AGTGTATTGACACTT GCACATTTTTAAGATTTTTCC CTGC GGTCAAATCTTAAAAAT-TGC TTGTTGGGGCAAGCC TERM 346 244428 - 244390 - T 80 -8.9 -3.54459 | opp_overlap 244423, overlap 244391 GCAAGCCGCCCCAAA CCCTGCC-ACTTCGGGCCA AGT TGGCCCGAAGTCGGC-GCT TCGCACCTTATGTTG TERM 347 244427 - 244391 - T 93 -12.4 -2.72461 | opp_overlap 244423, overlap 244390 CAAGCCGCCCCAAAC CCTGCC-ACTTCGGGCCA AGT TGGCCCGAAGTCGGC-GC TTCGCACCTTATGTT CKL_0274 245860 - 244454 - | RLX-related protein TERM 348 244550 - 244574 + g 72 -3.5 -5.24796 | CTGCATATCTTTTTT GGTTTCCCG ATACTCC CGGTAAGCC TTTTTCTTGTCTGCC TERM 349 245446 - 245430 - G 82 -7.9 -4.4715 | overlap 245431 GCCGAACCGATAAAA TCCCGGA ATT TCCGGGT GCAGTCCAGCGAGGT TERM 350 245445 - 245431 - G 88 -11.4 -3.27808 | overlap 245430 CCGAACCGATAAAAT CCCGGA ATT TCCGGG TGCAGTCCAGCGAGG TERM 351 245910 - 245882 - H 100 -17.5 -5.00616 | overlap 245885 CTTTCCTCGAAAAAA CAACTTCGGGCCA AGT TGGCCCGAAGTAG CCCGGCAGCTCTGTT TERM 352 245907 - 245885 - H 100 -17.8 -4.61482 | overlap 245882 TCCTCGAAAAAACAA CTTCGGGCCA AGT TGGCCCGAAG TAGCCCGGCAGCTCT CKL_0275 245974 - 246369 + | hypothetical protein CKL_0276 246485 - 247354 + | hypothetical protein TERM 353 247388 - 247422 + T 100 -21.4 -4.00868 | opp_overlap 247388 TTTTGTGTAGCAAAA GCGGGGAGCGGCGGCA TTG TGCCAACGCTCCCCGC TTTCCTTATAGCTCC TERM 354 247422 - 247388 - T 100 -23.6 -4.25104 | opp_overlap 247388 TTTTGTGTAGCAAAA GCGGGGAGCGGCGGCA TTG TGCCAACGCTCCCCGC TTTCCTTATAGCTCC CKL_0277 247775 - 247428 - | hypothetical protein TERM 355 247753 - 247742 - G 79 -7.2 -4.35044 | TCACCCAAACATAAA GGGG AACG CCCC GCCTGCGTTTGGGGC CKL_0278 247954 - 247772 - | hypothetical protein TERM 356 247977 - 248005 + r 100 -16.1 -3.22943 | overlap 247972 247980 AAACCTCCTTTTTTG TAACTTCGGGCCA AGT TGGCCCGAAGTGA TTACCTGTCTTTCTC TERM 357 247980 - 248002 + r 100 -17.8 -2.7927 | overlap 247977 247972 CCTCCTTTTTTGTAA CTTCGGGCCA AGT TGGCCCGAAG TGATTACCTGTCTTT CKL_0279 248593 - 248006 - | hypothetical protein TERM 358 248033 - 248078 + g 87 -11.8 -2.78384 | overlap 248046 248055 248071 CTCTGTGCCTTTTTC GGGAGCAGGACGGGCGGCGT TGTCCC GTGCCGCTTGTTTTGCCCCC TCTGCTAGCCGGGCG TERM 359 248339 - 248350 + g 74 -5.8 -4.62069 | opp_overlap 248339 248337 TTGAGTAGAATAATA TCGG TAAG CCGA TTTTTCGGATACGCC TERM 360 248673 - 248707 + r 89 -6.4 -5.40072 | gap 1, opp_overlap 248680 CATAGATACCTTTTC CTTGA-AACCGGGGC CGGAAA GCCCCGGAAATCAAG TTTTTTTCAAGCAAA TERM 361 248699 - 248680 - R 100 -12.8 -3.53091 | opp_overlap 248673 ACCTTTTCCTTGAAA CCGGGGCC GGAA AGCCCCGG AAATCAAGTTTTTTT CKL_0280 249208 - 248735 - | hypothetical protein TERM 362 249121 - 249143 + g 100 -17.8 -3.11732 | overlap 249113 CACTCATAGGTCTGA CTTCGGGCCA AGT TGGCCCGAAG TTCCCTCCCTTTGCG CKL_0281 249995 - 249318 - | hypothetical protein TERM 363 249973 - 249959 - G 100 -12.8 -5.52986 | AGGTCATTAAAAAAA CGGCGC ACA GCGCCG CCATCATGCGAAATT CKL_0282 250261 - 249992 - | hypothetical protein CKL_0283 252265 - 250286 - | hypothetical protein TERM 364 251972 - 252018 + g 87 -10.8 -3.54424 | overlap 251975 CTTGCTGTCCTGCCG GAGCTTTCCCGACTTCGGGCCA AGT TGGCCCGAAGTGGCAGAAGTGC TTTCCACAGATGAAA TERM 365 251975 - 252015 + g 100 -13.3 -2.90813 | overlap 251972 GCTGTCCTGCCGGAG CTTTCCCGACTTCGGGCCA AGT TGGCCCGAAGTGGCAGAAG TGCTTTCCACAGATG CKL_0284 254621 - 252258 - | hypothetical protein TERM 366 252970 - 252982 + gr 75 -4.8 -5.09225 | opp_overlap 252970 ACCAGCCGCACACAA CGGT CAATC ACCG TTTTTTCAATAGGCT TERM 367 253047 - 253069 + gr 71 -8.4 -2.85668 | opp_overlap 253048 253049 TAAGGACAATAAAAA ATCCGCTTTC ATA GAAAGCGGGC TGTCCTCTCCGGCTA TERM 368 253068 - 253048 - GR 100 -9.7 -5.59534 | opp_overlap 253047, overlap 253049 AAGGACAATAAAAAA TCCGCTTTC ATA GAAAGCGGG CTGTCCTCTCCGGCT TERM 369 253067 - 253049 - GR 100 -13.2 -3.9328 | opp_overlap 253047, overlap 253048 AGGACAATAAAAAAT CCGCTTTC ATA GAAAGCGG GCTGTCCTCTCCGGC TERM 370 253442 - 253412 - GR 70 -5.3 -4.47271 | opp_overlap 253400 253414, overlap 253414 TAAAGGGAACGAAAA TAGCGGTGCTTGA GGTTG TCATGCCCCGCTG TATCTCGATTCCGTT TERM 371 253440 - 253414 - GR 74 -7.9 -3.82923 | opp_overlap 253414 253400, overlap 253412 AAGGGAACGAAAATA GCGGTGCTTGA GGTTG TCATGCCCCGC TGTATCTCGATTCCG TERM 372 253949 - 253905 - GR 100 -14.4 -2.90219 | gap 2, opp_overlap 253909, overlap 253895 253909 CATAATCTGCATATA CAGAGCCGCGCC-C-CATGTGG TTC CCACACGAAAGGCGCGGCTTTG GCGAAAGTCAAAGGA TERM 373 253945 - 253909 - GR 100 -13.8 -3.052 | gap 2, opp_overlap 253909, overlap 253905 ATCTGCATATACAGA GCCGCGCC-C-CATGTGG TTC CCACACGAAAGGCGCGGC TTTGGCGAAAGTCAA TERM 374 253909 - 253945 + gr 84 -9.4 -3.53811 | gap 2, opp_overlap 253905 253909 ATCTGCATATACAGA GCCGCGCC--CCATGTGG TTC CCACACGAAAGGCGCGGC TTTGGCGAAAGTCAA TERM 375 254040 - 254025 - GR 74 -6.8 -4.27617 | overlap 254026 CATATCCCATGAAAA GCGGAA CGGC TCCCGC CCTCCGGGGTGAAGC TERM 376 254152 - 254187 + gr 70 -8.2 -3.14344 | opp_overlap 254138 254137, overlap 254180 TCCGCTTCGATACGC TCCAAGCGGGGTCGTG CCGC CGCGATCCCGTTCGCA TTGATACCGAACGTA CKL_0285 254964 - 254569 - | hypothetical protein TERM 377 254980 - 255011 + r 76 -8.8 -3.57441 | gap 1, overlap 254985 TGAAAAATCCTCCTT TCTGACTTCGGGCCA AGT TGACCCGAAGTT-GA TTATCGTTCTGCATT TERM 378 254985 - 255007 + r 95 -12 -3.51091 | overlap 254980 AATCCTCCTTTCTGA CTTCGGGCCA AGT TGACCCGAAG TTGATTATCGTTCTG CKL_0286 255407 - 255012 - | hypothetical protein TERM 379 255423 - 255445 + r 100 -17.8 -3.34113 | overlap 255418 AAAAACTCCTTTCCA CTTCGGGCCA AGT TGGCCCGAAG TTACCTTTCTGCATT CKL_0287 255940 - 255446 - | hypothetical protein TERM 380 255492 - 255517 + g 75 -8.2 -3.6682 | TTTACCGGAGCAGGC CGGGCGGCGT TCTCCT GTGCCGCCTG TTTGGATCCCTCCGC TERM 381 255677 - 255687 + g 71 -8.2 -3.20709 | overlap 255684 GGGGCGGGATGTATC CCGG TAG CCGG TCTTGCTGGTCTTAT TERM 382 255851 - 255868 + g 74 -7.7 -3.86252 | gap 1, overlap 255853 GGTAACGTCCAGTTT CA-GCGGC AAA GCCGCCTG TTCTGTTTCCTGCGG TERM 383 255853 - 255865 + g 80 -10.5 -2.70128 | overlap 255851 TAACGTCCAGTTTCA GCGGC AAA GCCGC CTGTTCTGTTTCCTG CKL_0288 256862 - 255996 - | hypothetical protein TERM 384 256731 - 256704 - G 95 -12 -3.61902 | opp_overlap 256706 256725 256728 CCGTATGAGAGAGAA CACACCGGGG TTCCAATT CCCCGGCGTG GTTCCCACCTGTGTT CKL_0289 257086 - 256874 - | hypothetical protein TERM 385 257149 - 257134 - R 100 -8.2 -5.60993 | TCGGGTACAAAAAAA CCGCCA TTTT CGGCGG CTGTCACTTCGGGAC TERM 386 257156 - 257178 + r 95 -12 -3.32268 | TTTCGGCGGCTGTCA CTTCGGGACA AGT TGGCCCGAAG TTATGCAAATGCTTC CKL_0290 259011 - 257179 - | plasmid transfer factor-related protein TERM 387 258838 - 258866 + g 70 -7.4 -3.59024 | opp_overlap 258838, overlap 258864 ATCGGACAGCACAAA GCCCGGCG CAAATGAAGCAAA CGCCGGGC TTATAGTCTTTATCA TERM 388 258866 - 258838 - G 79 -8.1 -4.01888 | opp_overlap 258838 258864 ATCGGACAGCACAAA GCCCGGCGC AAATGAAGCAA ACGCCGGGC TTATAGTCTTTATCA CKL_0291 259474 - 259001 - | hypothetical protein TERM 389 259381 - 259396 + g 72 -9 -2.72511 | overlap 259380 TTTGTATCTGCCGGA GTGCTG CCGC CAGCAC CTTTGCCAGCGTCCG TERM 390 259519 - 259549 + r 86 -10.4 -3.16743 | overlap 259521 259523 AATCGTATAGGCGGG AGGACTTCGGGCCA AGT TGGCCCGAAGTGTG TTACCTCTCTGCATT TERM 391 259521 - 259547 + r 100 -15.2 -3.14125 | overlap 259519 259523 TCGTATAGGCGGGAG GACTTCGGGCCA AGT TGGCCCGAAGTG TGTTACCTCTCTGCA TERM 392 259523 - 259545 + r 100 -17.8 -3.12856 | overlap 259521 259519 GTATAGGCGGGAGGA CTTCGGGCCA AGT TGGCCCGAAG TGTGTTACCTCTCTG CKL_0292 260347 - 259550 - | hypothetical protein TERM 393 260127 - 260104 - G 72 -7.4 -3.78934 | opp_overlap 260107, overlap 260105 260107 260121 260122 GCCCCTGCATAACAA TGACCGCCTT TTGC AAAGCGGTCT TAACCGGGTGGTTCT TERM 394 260126 - 260105 - G 83 -10.9 -2.87146 | opp_overlap 260107, overlap 260104 260107 260121 260122 CCCCTGCATAACAAT GACCGCCTT TTGC AAAGCGGTC TTAACCGGGTGGTTC TERM 395 260364 - 260395 + r 100 -14.6 -3.51597 | gap 1, overlap 260369 GGCTTTAACCTCCTT TCACACTTCGGGCCA AGT TGGCCCGAAGT-TGG TTATCGTTCCGCATT TERM 396 260369 - 260391 + r 100 -17.8 -3.5002 | overlap 260364 TAACCTCCTTTCACA CTTCGGGCCA AGT TGGCCCGAAG TTGGTTATCGTTCCG CKL_0293 261100 - 260396 - | hypothetical protein CKL_0294 261446 - 261093 - | hypothetical protein TERM 397 261349 - 261335 - G 76 -8.5 -3.53563 | opp_overlap 261334 ACAGGGTCGGGCAAA CCGGG GAAAA CCCGG CTTCATAGACTGCCC TERM 398 261614 - 261602 - R 81 -10.5 -2.73468 | opp_overlap 261612 CAAGAGTGCGAAGCA CCGCC TAC GGCGG CAAGCTCTTGACCGA TERM 399 261719 - 261745 + r 79 -9.4 -3.30412 | opp_overlap 261717, overlap 261715 261719 261721 AGCCCCGCATATACC GACTTCGGGCCA ACT TGACCCGAAGTG CTTATTTTTCCTGTT TERM 400 261719 - 261746 + r 88 -9.2 -4.53398 | gap 1, opp_overlap 261717, overlap 261719 261715 261721 AGCCCCGCATATACC G-ACTTCGGGCCA ACT TGACCCGAAGTGC TTATTTTTCCTGTTC TERM 401 261721 - 261743 + r 95 -12 -3.19331 | opp_overlap 261717, overlap 261719 261719 261715 CCCCGCATATACCGA CTTCGGGCCA ACT TGACCCGAAG TGCTTATTTTTCCTG CKL_0295 263366 - 261747 - | DNA-binding protein TERM 402 262753 - 262763 + g 73 -4.6 -4.93696 | overlap 262744 TTTTCCGGTTTTACA GCCT TTG GGGC TTTTTCCTGTTTGGC TERM 403 262799 - 262813 + g 72 -3.5 -5.24129 | GAGTAGGCTTTTTGT CCGCT TTTTC AGTGG TTTTTTGTGAGCGAG TERM 404 263198 - 263224 + g 72 -5 -4.90266 | GAGTGCTTTTTTCTT CTGCTGCGGC TTCCTGT GCCGGGGCGG TTTTTACTTCGTCCG TERM 405 263328 - 263302 - G 93 -9.5 -4.7373 | opp_overlap 263325 TTATGGCATGAAAAA GGGGCTTGA TTTTTTAGG TCAAGCCCC ACAGGGATTTGTAAT TERM 406 263429 - 263401 - H 91 -8.2 -5.04597 | opp_overlap 263401 263403 ATCCAGATACAAAAA TACCGCCTATCT TGTCC AATTAGGCGGTA TCCTGTGTAATGTGA TERM 407 263469 - 263492 + H 73 -5.3 -4.7416 | TTTTATTTTGGTATT CCCTTATCC CGCATA GAATAAGGG TTTTTGCAGTTTTCC TERM 408 263725 - 263745 + H 93 -8.3 -5.20333 | opp_overlap 263720 263726, overlap 263726 GCCCGAAAAAGCAAA ACCACTAGT TTT ACTAGTGGA TTTTTATTGTGAATA TERM 409 263726 - 263744 + H 95 -11.8 -3.71115 | opp_overlap 263720 263726, overlap 263725 CCCGAAAAAGCAAAA CCACTAGT TTT ACTAGTGG ATTTTTATTGTGAAT TERM 410 263744 - 263726 - H 100 -11.8 -4.77757 | opp_overlap 263726 263725, overlap 263720 CCCGAAAAAGCAAAA CCACTAGT TTT ACTAGTGG ATTTTTATTGTGAAT CKL_0296 263754 - 263954 + | resolvase CKL_0297 263988 - 264371 + | resolvase CKL_0298 264832 - 265725 + | hypothetical protein TERM 411 265740 - 265767 + F 80 -7.8 -4.46112 | opp_overlap 265740 GGTATAGCTAATTTA GAGGAATAGTAT ATAA AAACTGTTCCTC TTTCTTTAGATAAGA CKL_0299 265814 - 266089 + | hypothetical protein TERM 412 266428 - 266472 + F 100 -9.6 -5.36965 | opp_overlap 266430, overlap 266430 ACAATATAAGAAATT AAGAGGTTGTAATTTAGATT TTAAT GATTTAAATTACAGCCTCTA TTTTTTATGATATTG TERM 413 266470 - 266430 - f 71 -7.1 -3.75295 | opp_overlap 266430 266428 AATATAAGAAATTAA GAGGTTGTAATTTAGAT TTTAATG ATTTAAATTACAGCCTC TATTTTTTATGATAT TERM 414 266430 - 266470 + F 100 -12.2 -4.30057 | opp_overlap 266430, overlap 266428 AATATAAGAAATTAA GAGGTTGTAATTTAGATT TTAAT GATTTAAATTACAGCCTC TATTTTTTATGATAT TERM 415 267085 - 267069 - g 72 -5.1 -4.77757 | opp_overlap 267068 267069 267071 TTCTAAAAATGAAAA CAGCAGA AGA TTTGCTG GTATTCTTCAGAAGA CKL_0300 266605 - 267321 + | germination-specific N-acetylmuramoyl-L-alanine amidase TERM 416 267362 - 267390 + F 73 -7.6 -3.76837 | gap 1, opp_overlap 267362 267360 TTAGAAAGAATAAGA CTGCAG-TACTTA AATA TAGGTAACTGCAG TTATTGAATTATATG TERM 417 267649 - 267636 - g 78 -6.7 -4.45807 | opp_overlap 267635 CATTAAAATAAATAA GGACA GCAG TGTCC CGTTATATTTACAGA CKL_0301 267607 - 268584 + | transcriptional regulator TERM 418 269195 - 269185 - g 70 -4 -4.99638 | opp_overlap 269177 ATACCTATAGAAAAA TCTA TTC TAGA CTGGCAATATTGCGA mutE 268696 - 269988 + | MutE TERM 419 270164 - 270150 - g 70 -4.2 -4.95547 | TGCAGAAGAAGAAAA TTGGCC TAT GGCAAA AGATATTCTGTATAA TERM 420 270234 - 270250 + G 70 -4.4 -4.8543 | opp_overlap 270236, overlap 270236 ACCTATGTGTCAGGA TACAGG AATGG CCTGTG TTTTTATAAAAATTG fumA 270031 - 270873 + | fumarate hydratase fumB 270925 - 271491 + | FumB TERM 421 271674 - 271692 + F 70 -7.6 -3.40191 | opp_overlap 271672 271674 271677 271684, overlap 271677 271684 GAGGTTAAGAATATA TAAGAATT AAC AATTCTTA TTGGTGTATTATGGG CKL_0305 271703 - 272398 + | CitXG-related protein CKL_0306 272494 - 273207 + | hypothetical protein TERM 422 273780 - 273764 - g 70 -3.8 -4.96501 | TTGGATAAAAATAAA GTAATA GCTTT TATTAC GGATCTTGGGGGAAA pts1 273248 - 274864 + | Pts1 CKL_0308 274969 - 275745 + | hypothetical protein TERM 423 276432 - 276420 - g 81 -2 -6.04419 | AAAATAATAAAAAAA TTGA AAATG TCAA TGGGAAAATTGATAA CKL_0309 275738 - 276970 + | hypothetical protein TERM 424 277042 - 277024 - f 100 -9.6 -5.3671 | overlap 277026 AATATAATTAAAAAA CATACCCC TAC GGGGTATA AGGAGGGTGAAAAAT TERM 425 277040 - 277026 - f 91 -10 -4.29187 | overlap 277024 TATAATTAAAAAACA TACCCC TAC GGGGTA TAAGGAGGGTGAAAA TERM 426 277107 - 277126 + G 74 -5.8 -4.67904 | gap 1, opp_overlap 277107 TCTGTTAAGGAATCA TCAACT-CC AGT GGTAGTTGA TTTTTGGGCTTCATG TERM 427 277278 - 277264 - g 76 -7.2 -4.2803 | opp_overlap 277263 277258 CAGCTCAATTTAAAA TTGGAA GTA TTCCAA CTGTAATGGTGTTCA trx 277056 - 277373 + | Trx TERM 428 277781 - 277771 - g 71 -5.4 -4.71223 | GTAGAATATACAAAA CCTT TAA AAGG GGAACAAGAATTTCT trxR 277423 - 278277 + | TrxR TERM 429 278399 - 278360 - T 100 -15.2 -3.67558 | opp_overlap 278360 TATATATTTTAAGAA GGGTTGTGAAGAGCAATT GTTA AATTGCTTTGCACAACCC TTTTTTTAATTTACT TERM 430 278360 - 278399 + T 100 -17.4 -5.73563 | opp_overlap 278360 TATATATTTTAAGAA GGGTTGTGAAGAGCAATT GTTA AATTGCTTTGCACAACCC TTTTTTTAATTTACT CKL_0312 278929 - 278405 - | spore cortex-lytic enzyme TERM 431 278931 - 278921 - G 85 -2.6 -6.14618 | opp_overlap 278921 TATAAAACAAAAAAA TTTT TTC AAAA TATATCCTCCTTATT TERM 432 279276 - 279303 + GH 83 -10.1 -3.28924 | opp_overlap 279281 GATATACTGGTAGTA GCATATATACT CTATAA AGTATATATGC TTATAAAGGAGACTA CKL_0313 279201 - 280052 + | hypothetical protein TERM 433 280436 - 280422 - gf 81 -2.9 -5.85244 | AATTAAAACAAAAAA CTTTT TCTAT AAAAG CAGTGTCACAAGGGA TERM 434 280978 - 280968 - gf 73 -5.4 -4.68705 | ATAATTCTAATAAAA CTTC TCA GAAG GAAATGAATTTAAAT CKL_0314 280019 - 281272 + | hypothetical protein TERM 435 281566 - 281589 + G 90 -9.6 -4.25104 | opp_overlap 281565 281568 TAATTGTGGGAATAG GACCTGCAGG TATG TTTGCAGGTC TTTTACTGGCAGAAA CKL_0315 281253 - 282854 + | dehydrogenase TERM 436 282923 - 282909 - f 70 -5.8 -4.34759 | TATAATAGCAATAAA TTTTGA ACT TCAAAA TTAAAAAAATTGTTT TERM 437 283095 - 283126 + F 73 -9 -2.76708 | opp_overlap 283095, overlap 283094 283092 283101 GTAAATGTAACTTAA CTTAAATCATGGAA AATT TTTTATGATTTAAG GTTATATGTGGGTTG TERM 438 283313 - 283368 + F 74 -5.1 -5.13344 | gap 2, opp_overlap 283313 AGTCTTGCATAAGAA TCCCATCAAATTGTTCTATT--TTACC CTGT GATAATTAATAGGACAGTCTGATGGGA TTTTTATATTACTGT glmM 283490 - 284839 + | GlmM TERM 439 284859 - 284885 + F 85 -3 -6.04953 | opp_overlap 284861, overlap 284851 284861 GTTAAAATAATAAAA TGCATTGTCATA AAA TTTGACAGTGTG TTTTTTTATTTGTGT TERM 440 284861 - 284883 + F 75 -5.6 -4.6372 | opp_overlap 284861, overlap 284859 284851 TAAAATAATAAAATG CATTGTCATA AAA TTTGACAGTG TGTTTTTTTATTTGT TERM 441 285208 - 285191 - f 75 -7.1 -4.11371 | TAACAGCTGGTAAAA CCAAAAA GTGA TTTTTGG TACAATATCAGCCTG TERM 442 285451 - 285441 - g 74 -3.2 -5.40072 | TTTGTTGGAAAAAAA GATG CAT CACC TATTTTAATTGAAGG TERM 443 286508 - 286496 - g 85 -9.1 -3.95986 | TTTAAGGGAATCAAA GGCTC GTG GAGCC AGAGTTATTGCCATA TERM 444 286686 - 286676 - g 74 -4 -5.24796 | TGCACAGAATAAAAA TACT ATT AGTA AAGAAGAGATAGATG TERM 445 287026 - 287043 + G 72 -8.5 -3.05384 | overlap 287028 AAGTGACTACAAGGG GAGCTAA GGTC TTAGCTC TTACATCGGAGGGAA glmS 285408 - 287234 + | D-fructose-6-phosphate amidotransferase TERM 446 287382 - 287353 - f 80 -8.1 -4.18119 | gap 1, opp_overlap 287353 ATGAAAGTATATAAA GCTAGACATT-TTA AAT TAAGAATGCCTAGC TTTTTGTTATATTTA TERM 447 287353 - 287382 + F 84 -5.9 -5.33331 | gap 1, opp_overlap 287353 ATGAAAGTATATAAA GCTAGACATT-TTA AAT TAAGAATGCCTAGC TTTTTGTTATATTTA TERM 448 288329 - 288339 + G 70 -4 -4.97402 | opp_overlap 288321 288329, overlap 288323 288321 TAAAAAATATAAGAA TAAG AGT CTTA TTTTTGTAGCTTTTC CKL_0318 287508 - 288743 + | hypothetical protein CKL_0319 288810 - 289091 + | hypothetical protein TERM 449 289700 - 289675 - f 74 -9.1 -2.87586 | overlap 289674 ATTAATGTATCAAAT GCTGCTTTGAA ATCT TTGAAAGCAGC TAAAAAAGGAAGAGG CKL_0320 289829 - 290590 + | hypothetical protein TERM 450 291038 - 291007 - f 77 -7.6 -4.19649 | opp_overlap 291012, overlap 291004 AAAATTAAATAATAA GTTAATACTAAA TTTAAATG TTTAGTATTAAC TAAAACTAAAGCATA TERM 451 291052 - 291096 + F 72 -6 -4.63089 | opp_overlap 291057, overlap 291057 291092 ACTAAAACTAAAGCA TAGAAGGCTAGGTATTTTAA GAAAG TTAAAATATCTAGTCTTTCG TTATTTTTTGAGATA TERM 452 291057 - 291091 + F 91 -10.3 -4.29369 | opp_overlap 291057, overlap 291052 AACTAAAGCATAGAA GGCTAGGTATTTTAA GAAAG TTAAAATATCTAGTC TTTCGTTATTTTTTG TERM 453 291792 - 291759 - g 83 -8.3 -4.2679 | GAACTTCTACCAAAA GATGAGCATCAATAT CCAG ATATCTATGCCCATC AAGGAGAAGAATTTA CKL_0321 291432 - 291971 + | transcriptional regulator TERM 454 292696 - 292706 + G 74 -5.4 -4.87133 | TGATGGACCAGGTGT TCGT ACC ACGA TTTTCTTTAAAGGCT CKL_0322 292640 - 293416 + | glycyl radical activating protein CKL_0323 293477 - 295879 + | glycyl radical activating protein CKL_0324 296080 - 296571 + | hypothetical protein CKL_0325 296644 - 297270 + | hypothetical protein proC1 297333 - 298139 + | ProC1 CKL_0327 298287 - 298568 + | hypothetical protein TERM 455 298640 - 298582 - f 79 -9.4 -3.24137 | opp_overlap 298588 298593 298614, overlap 298588 298593 AATTATTTTATAATA TAATAAGAAAATGATTGTATTTTTATTT TAG ATATAAAGATACAATCATTTTATTTTTA TAGTAATTTTTTATC TERM 456 298634 - 298588 - f 80 -8.4 -4.00486 | opp_overlap 298588 298593 298614, overlap 298582 298593 TTTATAATATAATAA GAAAATGATTGTATTTTTATTT TAG ATATAAAGATACAATCATTTTA TTTTTATAGTAATTT TERM 457 298588 - 298634 + F 100 -10.6 -4.95806 | opp_overlap 298588 298582 298593, overlap 298593 298614 TTTATAATATAATAA GAAAATGATTGTATTTTTATTT TAG ATATAAAGATACAATCATTTTA TTTTTATAGTAATTT TERM 458 298629 - 298593 - f 91 -8.3 -4.99312 | opp_overlap 298588 298593 298614, overlap 298588 298582 AATATAATAAGAAAA TGATTGTATTTTTATTT TAG ATATAAAGATACAATCA TTTTATTTTTATAGT TERM 459 298593 - 298629 + F 100 -10.5 -5.3658 | opp_overlap 298593 298588 298582, overlap 298588 298614 AATATAATAAGAAAA TGATTGTATTTTTATTT TAG ATATAAAGATACAATCA TTTTATTTTTATAGT CKL_0328 298952 - 299428 + | hypothetical protein CKL_0329 300663 - 299917 - | PurE-related protein CKL_0330 301878 - 300745 - | oxidoreductase CKL_0331 302134 - 302517 + | transcriptional regulator TERM 460 303763 - 303743 - g 85 -2.7 -6.11229 | overlap 303745 AGCAAAAGAAAAAAA TATATCT ATAGATA AGATATA TAAAGTAGTATATAG CKL_0332 302595 - 303794 + | hypothetical protein TERM 461 304305 - 304332 + F 90 -3.6 -6.08342 | gap 1, opp_overlap 304308, overlap 304308 AACTTAAAACCACAA AAAGTACCAAGAT AAT AT-TTGGTACTTA TTTTTTTATTTATTG TERM 462 304308 - 304329 + F 77 -5.3 -5.01858 | gap 1, opp_overlap 304308, overlap 304305 TTAAAACCACAAAAA GTACCAAGAT AAT AT-TTGGTAC TTATTTTTTTATTTA TERM 463 304329 - 304308 - f 77 -5.3 -5.09245 | gap 1, opp_overlap 304308 304305 TTAAAACCACAAAAA GTACCAAGAT AAT AT-TTGGTAC TTATTTTTTTATTTA TERM 464 304494 - 304444 - f 72 -7 -3.9398 | opp_overlap 304450, overlap 304445 CCATAACCGCAGAAA TGCTTATGACTCCTACAAATAACA TTC TGTTATTTGTAGGAGTCATTTTGT TTAAAGAGGTTATGA TERM 465 304493 - 304445 - f 84 -10.5 -2.95906 | opp_overlap 304450, overlap 304444 CATAACCGCAGAAAT GCTTATGACTCCTACAAATAACA TTC TGTTATTTGTAGGAGTCATTTTG TTTAAAGAGGTTATG TERM 466 304450 - 304488 + F 100 -23.6 -4.86731 | opp_overlap 304445 304444 CCGCAGAAATGCTTA TGACTCCTACAAATAACA TTC TGTTATTTGTAGGAGTCA TTTTGTTTAAAGAGG CKL_0333 304542 - 304985 + | CrcB-related protein CKL_0334 304988 - 305353 + | CrcB-related protein CKL_0335 305378 - 305719 + | hypothetical protein TERM 467 305755 - 305804 + T 100 -14.1 -2.79915 | opp_overlap 305755 305759, overlap 305759 AAGCATATTACCATA TAAAGTTAATTTACGAATATAAT AGTA ATCATATTCGTAAATCAACTTTA TATGGTACAATAGAT TERM 468 305804 - 305755 - T 100 -18.5 -2.85378 | opp_overlap 305755 305759, overlap 305759 AAGCATATTACCATA TAAAGTTAATTTACGAATATAAT AGTA ATCATATTCGTAAATCAACTTTA TATGGTACAATAGAT TERM 469 305759 - 305800 + T 91 -10.5 -4.08974 | opp_overlap 305755 305759, overlap 305755 ATATTACCATATAAA GTTAATTTACGAATATAAT AGTA ATCATATTCGTAAATCAAC TTTATATGGTACAAT TERM 470 305800 - 305759 - T 100 -14.9 -4.10566 | opp_overlap 305759 305755, overlap 305755 ATATTACCATATAAA GTTAATTTACGAATATAAT AGTA ATCATATTCGTAAATCAAC TTTATATGGTACAAT TERM 471 306020 - 305984 - T 71 -4 -5.13354 | gap 1 TTGATAAAAAATAAA TAAGACTATAGT-AGTT ATTT AACTGACTATAAACTTA TTATACGGGGAGTGT gerKB1 307293 - 306205 - | GerKB1 TERM 472 306521 - 306508 - G 76 -5.3 -5.0133 | CACCCGTTCAAAAAA TTCAC CAAT GTGAA TAAACCTCGTAAGCT TERM 473 307037 - 307020 - G 77 -4.2 -5.42605 | CTAATAAAAAGAAAA TAGGAA ATAATA TTCCTA CAATTCTACCTAACT CKL_0337 307533 - 307315 - | hypothetical protein gerKC1 308767 - 307583 - | GerKC1 gerKA1 310369 - 308771 - | GerKA1 TERM 474 309061 - 309051 - G 71 -5.4 -4.7329 | AAAATCATGCAAAAA CGTA AAA TACG AATAGCATAACCCAT CKL_0340 310743 - 311315 + | transcriptional regulator fur1 311369 - 311803 + | Fur1 TERM 475 311884 - 311931 + T 80 -8.8 -4.07246 | gap 1, opp_overlap 311884, overlap 311889 GAATATAGAATTGAA TAAAAGCAGAGATACACTTTGAA GGA TTTAGAGTG-ACTTCTGCTTTTA TTTCATTTAAACTAA TERM 476 311889 - 311926 + T 73 -4.3 -5.04868 | gap 1, opp_overlap 311884, overlap 311884 TAGAATTGAATAAAA GCAGAGATACACTTTGAA GGA TTTAGAGTG-ACTTCTGC TTTTATTTCATTTAA CKL_0342 312461 - 311943 - | oxidoreductase TERM 477 312778 - 312762 - H 100 -12.3 -5.37043 | ACTTGATAGAAAAAA GCTGACC CAA GGTCAGC TCAAAATAATTCGAA msrA 312967 - 313449 + | methionine sulfoxide reductase A TERM 478 314297 - 314285 - g 72 -9.1 -2.604 | overlap 314275 314282 GAAGACAGCAAGTTA GCTGC ACA GCAGC TTGAAAAAACTGGAG CKL_0344 313571 - 314557 + | NADH oxidase TERM 479 314585 - 314622 + T 93 -10.1 -4.59081 | opp_overlap 314589, overlap 314589 ATTTAAGGAGTTATT AAAATAGACAGTTTTGA AAAA TCAAAACTGTCTATTGA TTTTCTCTGCATTTA TERM 480 314589 - 314618 + T 100 -15.3 -3.79162 | opp_overlap 314589, overlap 314585 AAGGAGTTATTAAAA TAGACAGTTTTGA AAAA TCAAAACTGTCTA TTGATTTTCTCTGCA TERM 481 314618 - 314589 - T 100 -15.3 -4.29396 | opp_overlap 314589 314585 AAGGAGTTATTAAAA TAGACAGTTTTGA AAAA TCAAAACTGTCTA TTGATTTTCTCTGCA CKL_0345 316429 - 314606 - | peptidoglycan biosynthesis protein CKL_0346 316951 - 316619 - | hypothetical protein TERM 482 317422 - 317447 + H 78 -8.5 -3.84406 | opp_overlap 317422, overlap 317427 AATTTAACATACCAA TGGAACAATTT TAAT AAATTGTTTCA TTATTATACTAGGAG TERM 483 317655 - 317638 - g 72 -2.8 -5.39905 | opp_overlap 317632 317629, overlap 317632 ATTAAATAATAAAAA CAATAA TTGTTC TTATTG TTCATTTAAAGTATG TERM 484 318411 - 318393 - g 74 -9 -3.17238 | overlap 318396 ATACTATAGATGCAA TAACTTCT CAT AGAAGTTA CAAGGATTCTAAAAA CKL_0347 317471 - 318715 + | hypothetical protein CKL_0348 318763 - 319140 + | hypothetical protein TERM 485 319199 - 319223 + F 71 -7.3 -3.75824 | ACTATGTGTCCATTG GTATATATGCT GTA ATCATATATAC TTATCTTGTAAGGTC CKL_0349 319267 - 320373 + | transcriptional regulator CKL_0350 321034 - 320483 - | hypothetical protein CKL_0351 321276 - 321022 - | hypothetical protein CKL_0352 321436 - 322239 + | hypothetical protein CKL_0353 322475 - 323038 + | RNA polymerase factor sigma-70 CKL_0354 323035 - 324072 + | hypothetical protein CKL_0355 324217 - 325152 + | transcriptional regulator CKL_0356 325227 - 325484 + | hypothetical protein TERM 486 325621 - 325589 - f 90 -10.9 -3.35996 | opp_overlap 325574 325589 325607, overlap 325574 325607 TATTTTGATGCAGAA TAGTATTTACATAAA ATA TATATGTAAATACTA TTTCATATATCTATT TERM 487 325589 - 325621 + F 95 -10.9 -3.92869 | opp_overlap 325574 325589 325607, overlap 325574 325607 TATTTTGATGCAGAA TAGTATTTACATAAA ATA TATATGTAAATACTA TTTCATATATCTATT CKL_0357 325688 - 326452 + | transcriptional regulator CKL_0358 326885 - 326577 - | methyltransferase TERM 488 326689 - 326708 + g 70 -4.2 -5.02476 | CTTCCAAATACATAA TCTGGAGA CAGT TCACCGGA TTTTTTCACAACTCT def1 327403 - 326918 - | Def1 CKL_0360 327569 - 328243 + | transcriptional regulator TERM 489 328574 - 328563 - g 81 -3 -5.76633 | GGATAGAGAAAAAAA TGAA AAGG TTCA GGAAGTAAAAGATAA CKL_0361 328240 - 329262 + | two component sensor kinase TERM 490 329318 - 329289 - T 100 -10.1 -4.79756 | opp_overlap 329289 GAGAGAATTTAAAAA CTGCCGTGTCATA ATTA TATGATACAGCAG TTTTTAAAATTAACT TERM 491 329289 - 329318 + T 100 -10.1 -4.67234 | opp_overlap 329289 GAGAGAATTTAAAAA CTGCCGTGTCATA ATTA TATGATACAGCAG TTTTTAAAATTAACT ahpF 330857 - 329328 - | AhpF ahpC 331433 - 330870 - | hypothetical protein CKL_0364 331752 - 332540 + | ABC transporter ATPase CKL_0365 332540 - 334453 + | transporter protein CKL_0366 334542 - 335534 + | transcriptional regulator TERM 492 335633 - 335578 - f 100 -25.4 -3.54158 | opp_overlap 335580 335584, overlap 335580 335584 GATGGCAATAATGAA TACAAATATAATATGGGTTGATTAGT TACG ACTAATCAACCCATATTATATTTGTT ATGAAAGGGGAGAAT TERM 493 335631 - 335580 - f 100 -28 -3.34089 | opp_overlap 335580 335584, overlap 335578 335584 TGGCAATAATGAATA CAAATATAATATGGGTTGATTAGT TACG ACTAATCAACCCATATTATATTTG TTATGAAAGGGGAGA TERM 494 335580 - 335631 + F 100 -28 -3.28712 | opp_overlap 335580 335578 335584, overlap 335584 TGGCAATAATGAATA CAAATATAATATGGGTTGATTAGT TACG ACTAATCAACCCATATTATATTTG TTATGAAAGGGGAGA TERM 495 335627 - 335584 - f 100 -23 -4.30231 | opp_overlap 335580 335584, overlap 335580 335578 AATAATGAATACAAA TATAATATGGGTTGATTAGT TACG ACTAATCAACCCATATTATA TTTGTTATGAAAGGG TERM 496 335584 - 335627 + F 100 -23 -4.30719 | opp_overlap 335584 335580 335578, overlap 335580 AATAATGAATACAAA TATAATATGGGTTGATTAGT TACG ACTAATCAACCCATATTATA TTTGTTATGAAAGGG CKL_0367 335654 - 337453 + | transport protein, ATPase and permease component CKL_0368 337446 - 339191 + | transport protein, ATPase and permease component TERM 497 339249 - 339271 + F 74 -4.2 -5.28561 | opp_overlap 339249 AATTTATTAGTTAAA GTGCCAAA AAATGAG TTTGGTAC TTTTTGTTATATATT CKL_0369 339443 - 339598 + | hypothetical protein TERM 498 339883 - 339863 - f 80 -8.5 -3.9009 | opp_overlap 339861 339863 AAGTCATCTCATAAA CTATTAAAA TGC TTTTAATAG TCTTGTAAAGTAAAG TERM 499 339863 - 339883 + F 74 -8.5 -3.23393 | opp_overlap 339863, overlap 339861 AAGTCATCTCATAAA CTATTAAAA TGC TTTTAATAG TCTTGTAAAGTAAAG TERM 500 339994 - 339960 - f 72 -6.7 -4.12857 | gap 1 AACCACCACAAACAA GTGTATCCATTTAGTT AAAA AACCAAA-AGATACAC CCACAAATAAGTTAA anfD 340115 - 341665 + | AnfD anfG 341696 - 342046 + | AnfG TERM 501 343225 - 343215 - g 74 -4 -5.26316 | GGACCGTATAAAAAA TAAG GGA CTTA AACTCGATCTGATTC anfK 342061 - 343449 + | AnfK TERM 502 343737 - 343754 + G 77 -9.9 -2.70946 | overlap 343736 343734 TTGATTGGCTGGTGA TCATGGG GGGA CCCATGA ATATTTATGAAGAAG TERM 503 344212 - 344230 + G 85 -10.4 -3.40073 | opp_overlap 344211 344216, overlap 344216 ATCAGAGAATGAGAT CAAATCCA AAA TGGATTTG TTAATTGATGCCAAT CKL_0373 343580 - 344290 + | amidotransferase CKL_0374 344306 - 344827 + | hypothetical protein TERM 504 345505 - 345495 - g 74 -5.4 -4.88288 | opp_overlap 345493 345495 TAAAAGAAGAGAAAA TACC CCG GGTA TGTTTTTATCATTTA CKL_0375 344888 - 346066 + | Fe-S oxidoreductase TERM 505 346249 - 346235 - g 72 -8.6 -3.10556 | overlap 346233 TTTAAAATAATGATA TTCTCC GGG GGAGAA CCATTGATGCGTAAA CKL_0376 346082 - 347074 + | Fe-S oxidoreductase CKL_0377 347096 - 347530 + | transcriptional regulator CKL_0378 347536 - 348000 + | transcriptional regulator CKL_0379 348145 - 348432 + | acetyltransferase TERM 506 348432 - 348472 + T 86 -9.3 -3.81258 | opp_overlap 348439, overlap 348434 348439 TTCCACAACTATTTG AGTATAAGCACTACTAA GATTGAA TTAGTAGTGCTTATATA TTTGAATATTCTTCA TERM 507 348434 - 348470 + T 100 -14.1 -3.48144 | opp_overlap 348439, overlap 348432 348439 CCACAACTATTTGAG TATAAGCACTACTAA GATTGAA TTAGTAGTGCTTATA TATTTGAATATTCTT TERM 508 348439 - 348465 + T 86 -9.6 -3.77303 | opp_overlap 348439, overlap 348434 348432 ACTATTTGAGTATAA GCACTACTAA GATTGAA TTAGTAGTGC TTATATATTTGAATA TERM 509 348465 - 348439 - T 82 -9.6 -3.4178 | opp_overlap 348439 348434 348432 ACTATTTGAGTATAA GCACTACTAA GATTGAA TTAGTAGTGC TTATATATTTGAATA CKL_0380 349397 - 348456 - | hydrolase CKL_0381 349571 - 350383 + | hypothetical protein TERM 510 351311 - 351347 + G 83 -10.3 -3.05463 | opp_overlap 351314, overlap 351314 TTTCTTGGAATGGGA ATAGCATATATCCATGG CAT CCATGAATATATGCTGG TTAAGTAGAAGGACT TERM 511 351344 - 351314 - g 100 -16.4 -3.09492 | opp_overlap 351311 351314 CTTGGAATGGGAATA GCATATATCCATGG CAT CCATGAATATATGC TGGTTAAGTAGAAGG TERM 512 351314 - 351344 + G 100 -14.2 -2.75064 | opp_overlap 351314, overlap 351311 CTTGGAATGGGAATA GCATATATCCATGG CAT CCATGAATATATGC TGGTTAAGTAGAAGG CKL_0382 350402 - 351355 + | hypothetical protein TERM 513 351358 - 351375 + T 86 -6.3 -5.24647 | opp_overlap 351358 351361 GCTGGTTAAGTAGAA GGACTGT AGTT ACAGTTC TTTTCTTTTATATAT CKL_0383 351975 - 351367 - | transporter protein CKL_0384 352820 - 351975 - | ABC transporter ATPase CKL_0385 353203 - 352823 - | transcriptional regulator TERM 514 352899 - 352872 - G 80 -9.2 -3.68886 | opp_overlap 352870, overlap 352873 ATCAATTCATTTAAA CTGAGTCCGCAA ATAT TTGCGGATTCAA CAATTTGCTGCATAA TERM 515 352898 - 352873 - G 81 -10.5 -2.8085 | opp_overlap 352870, overlap 352872 TCAATTCATTTAAAC TGAGTCCGCAA ATAT TTGCGGATTCA ACAATTTGCTGCATA TERM 516 353224 - 353246 + r 78 -9.4 -3.02263 | opp_overlap 353224 TTCTCCTTGTGAACA TTGTATATAT ATA ATATATACAA TGTTCACAAAAGTGT TERM 517 353246 - 353224 - R 78 -9.4 -3.01712 | opp_overlap 353224 TTCTCCTTGTGAACA TTGTATATAT ATA ATATATACAA TGTTCACAAAAGTGT CKL_0386 354556 - 353363 - | transporter protein CKL_0387 355144 - 354719 - | transcriptional regulator TERM 518 355048 - 355027 - G 78 -9.5 -3.19178 | opp_overlap 355031, overlap 355031 ATAAATTTACTAATA CCAACCACT GCTC AGTGGTTAG ATGAAATTTTTTTAA CKL_0388 355438 - 356184 + | transcriptional regulator CKL_0389 356181 - 357449 + | two-component sensor kinase TERM 519 357577 - 357599 + F 89 -7.8 -5.10767 | TAATATGTTTTTCAT GCATGAAATA GGC TGTTTCGTGC TTTTTGTATTGAATA CKL_0390 357718 - 358077 + | hypothetical protein TERM 520 358077 - 358125 + F 71 -7.8 -3.68506 | gap 1, opp_overlap 358073 358072 358088, overlap 358088 CGATTATAAACTTTA AAATTTAAAAAGGTTCATCA-GA AATT TCATGGTGAACCTTTTTAAAATA TTTCAATCGGTATTA TERM 521 358114 - 358088 - f 71 -4.5 -4.87318 | gap 1, opp_overlap 358077 358088 TTTAAAATTTAAAAA GGTTCATCA-GA AATT TCATGGTGAACC TTTTTAAAATATTTC TERM 522 358088 - 358114 + F 79 -6.7 -4.6856 | gap 1, opp_overlap 358088, overlap 358077 TTTAAAATTTAAAAA GGTTCATCA-GA AATT TCATGGTGAACC TTTTTAAAATATTTC CKL_0391 358160 - 359254 + | hypothetical protein CKL_0392 359258 - 360496 + | ABC transporter permease TERM 523 360713 - 360702 - g 71 -3 -5.1675 | GTATTTATTAAAAAA TCAA CAAG TTGA AAAGCTTAATGTTTC CKL_0393 360499 - 361167 + | ABC transporter ATPase TERM 524 362139 - 362166 + G 82 -8.8 -4.0031 | opp_overlap 362143, overlap 362143 ATACTTTAAATATGG TAAATTTATATT ACAA AATATAAATTTA TTATTTAATACGAAT TERM 525 362143 - 362162 + G 71 -5.2 -4.60258 | opp_overlap 362143, overlap 362139 TTTAAATATGGTAAA TTTATATT ACAA AATATAAA TTTATTATTTAATAC algI 361852 - 363273 + | AlgI TERM 526 363394 - 363378 - g 81 -2.3 -5.94713 | overlap 363379 ACTCCACAAAAAAAA GTTTCTA ATA TAGAAAA CAGAGTATTATGTCA CKL_0395 363285 - 364490 + | hypothetical protein CKL_0396 365879 - 365325 - | hypothetical protein CKL_0397 366774 - 366313 - | hypothetical protein TERM 527 366996 - 367009 + r 73 -5.3 -4.65838 | opp_overlap 366996 GTTTCCGGGAACATA CTCTA AAAT TAGAG TTTTTAGAATATATA TERM 528 367141 - 367170 + r 80 -5.2 -5.22943 | opp_overlap 367141 GAAGATATAGAAAAA CTATGCTAAT AAACTAAGAA ATTAGCATAG TTTTTTGACTTTACT TERM 529 367170 - 367141 - R 77 -5.2 -5.09685 | opp_overlap 367141 GAAGATATAGAAAAA CTATGCTAAT AAACTAAGAA ATTAGCATAG TTTTTTGACTTTACT CKL_0398 368667 - 367243 - | transpeptidase-related protein CKL_0399 369040 - 368672 - | transcriptional regulator TERM 530 369061 - 369084 + r 89 -11.2 -2.90956 | opp_overlap 369061 369063 369065, overlap 369054 369063 AGCACCTCCTTAATA CATATTCTAC ATAT GTAGAATATG TATGTCAAGTGCTTT TERM 531 369084 - 369061 - R 91 -11.2 -3.0263 | opp_overlap 369054 369061 369063, overlap 369063 369065 AGCACCTCCTTAATA CATATTCTAC ATAT GTAGAATATG TATGTCAAGTGCTTT TERM 532 369082 - 369063 - R 70 -8 -3.07013 | opp_overlap 369063 369061 369054, overlap 369061 369065 CACCTCCTTAATACA TATTCTAC ATAT GTAGAATA TGTATGTCAAGTGCT TERM 533 369063 - 369082 + r 70 -8 -3.002 | opp_overlap 369061 369063 369065, overlap 369061 369054 CACCTCCTTAATACA TATTCTAC ATAT GTAGAATA TGTATGTCAAGTGCT TERM 534 369128 - 369176 + r 100 -13.5 -5.10497 | opp_overlap 369109 369128 369130, overlap 369129 369130 ATTTTTATATAATAA TAGCCATATGTAGTATTTTATCT GAA ATATAAAATACTACATGTGGCCG TTTTTTACATGAATT TERM 535 369176 - 369128 - R 93 -11.3 -3.885 | opp_overlap 369128 369129 369130, overlap 369109 369130 ATTTTTATATAATAA TAGCCATATGTAGTATTTTATCT GAA ATATAAAATACTACATGTGGCCG TTTTTTACATGAATT TERM 536 369129 - 369175 + r 100 -14.8 -3.65214 | opp_overlap 369128 369130, overlap 369128 369130 TTTTTATATAATAAT AGCCATATGTAGTATTTTATCT GAA ATATAAAATACTACATGTGGCC GTTTTTTACATGAAT TERM 537 369130 - 369174 + r 100 -18.3 -2.78405 | opp_overlap 369128 369130, overlap 369129 369128 TTTTATATAATAATA GCCATATGTAGTATTTTATCT GAA ATATAAAATACTACATGTGGC CGTTTTTTACATGAA TERM 538 369174 - 369130 - R 100 -16.1 -3.52874 | opp_overlap 369130 369129 369128, overlap 369128 TTTTATATAATAATA GCCATATGTAGTATTTTATCT GAA ATATAAAATACTACATGTGGC CGTTTTTTACATGAA CKL_0400 370060 - 369302 - | hypothetical protein CKL_0401 370535 - 370053 - | RNA polymerase sigma-E factor TERM 539 370621 - 370642 + r 74 -3.9 -5.37345 | opp_overlap 370639, overlap 370609 370639 CTATCAAATGGTTCA TTTAATTTT TATT GAAATTAAA TTTTTTATAATTGAC TERM 540 370697 - 370667 - R 74 -2.7 -5.56673 | opp_overlap 370669 370678, overlap 370669 ATTGACAATAAAAAA CACTTAACAAATA TATTC TATATGTTAAGCA TTTTTGAATAGACTA CKL_0402 371990 - 370824 - | hypothetical protein TERM 541 371944 - 371963 + g 71 -2.2 -5.42259 | opp_overlap 371945 371947 371961, overlap 371945 371961 ATAAATATAAATAGG ATATTTTC TAAT GAAAATAC TTTTTTTAAAAGTGG TERM 542 372122 - 372144 + H 90 -8.6 -4.74504 | TAGAATGATTTTTAT GTATGAAATA AGT TATTTCATGC TTTTTGCATTGCAGT TERM 543 372430 - 372411 - g 93 -9.4 -4.64766 | opp_overlap 372408, overlap 372400 TGTATATTTTAAAAA TAGCAGAT TACC ATCTGCTA TAAATGTTTATACAT TERM 544 373391 - 373403 + G 71 -7.7 -3.4072 | ATAAATACGATTTAG GCTGT ATG ACAGC TTATGATGCAGCATA TERM 545 373442 - 373431 - g 81 -4.4 -5.35459 | ATATATTACAAAAAA GGAT CAGT ATCC TAACATGAATATACA CKL_0403 372325 - 373560 + | hypothetical protein CKL_0404 373641 - 374015 + | transcriptional regulator CKL_0405 374035 - 374439 + | hypothetical protein TERM 546 374517 - 374551 + F 88 -10.3 -3.58343 | opp_overlap 374520, overlap 374520 TTATCTACTTACCAG CAATCATCTAATATT AATAA AATTTTAGATGATTG TTTAGACATAATGGG TERM 547 375148 - 375138 - g 70 -4 -5.0065 | CATTTACAAATAAAA CTTT GGA AAAG GCCTTAAGAGAGAAA TERM 548 375904 - 375884 - g 73 -9.1 -2.86177 | opp_overlap 375886, overlap 375886 ATAGCTTACAGTACA GAGCCTTAT ACT ATAAAGCTC AATTCAAATATTGTA TERM 549 375976 - 375962 - g 100 -7.2 -5.48825 | TATGATGGAAAAAAA CTCTTT GAA AAAGAG AATCCTGAAGGTGAA CKL_0406 374813 - 376081 + | surface-layer protein CKL_0407 376140 - 377318 + | hypothetical protein CKL_0408 377576 - 377791 + | hypothetical protein CKL_0409 377917 - 378972 + | sensory transduction protein CKL_0410 379551 - 379093 - | hypothetical protein CKL_0411 379833 - 380330 + | transcriptional regulator TERM 550 380664 - 380639 - f 82 -6.3 -5.1287 | opp_overlap 380639 TCTATATTTAAAAAA TAAGTATTTGA TTTT TCAAGTACTTA TTTTTGCTTTTTGAA TERM 551 380639 - 380664 + F 95 -8.5 -5.18355 | opp_overlap 380639 TCTATATTTAAAAAA TAAGTATTTGA TTTT TCAAGTACTTA TTTTTGCTTTTTGAA TERM 552 380811 - 380830 + F 74 -2.2 -5.63857 | opp_overlap 380803 ATATAAGTAAATCAT TTAAAAGA CAGC TCTTTAAA TTTTTTTGGGTTTTT CKL_0412 381179 - 383182 + | methyl-accepting chemotaxis protein TERM 553 383363 - 383373 + F 84 -4 -5.86976 | opp_overlap 383354, overlap 383354 383354 TAAGTACCCTTTATT TAAG GGG CTTA TTTTTTATTTTATAA CKL_0413 383472 - 383735 + | hypothetical protein TERM 554 383785 - 383808 + T 86 -6.2 -5.29716 | gap 1, opp_overlap 383785 383788 ATATAATGTGAGAAA TAAGCACT-AT TAA ATCAGTGCTTA TTTTTATTCTGTTCA CKL_0414 385234 - 385058 - | integrase-related protein TERM 555 385337 - 385348 + r 76 -4.4 -5.31877 | ACATGAGGTGTTATT GGAT TGCC ATCC TTTTTTCTAGTACAT CKL_0415 385812 - 385315 - | integrase-related protein TERM 556 385354 - 385369 + g 100 -6.2 -5.71712 | ATTGCCATCCTTTTT TCTAGT ACAT ACTAGA TTTTTTTCTGTGCCC TERM 557 385995 - 386013 + H 78 -4.5 -5.46698 | overlap 385998 TTATTAATAACCTTG GTAGCTG TTTTT CAGCTTC TTTTTTACTTTTAAA TERM 558 385998 - 386010 + H 70 -4.8 -4.78121 | overlap 385995 TTAATAACCTTGGTA GCTG TTTTT CAGC TTCTTTTTTACTTTT TERM 559 386163 - 386148 - H 71 -7.6 -3.54543 | opp_overlap 386147 386148 386150 ATTCACCCTTTCAAA CAGAAC TTAT GTTCTG CTGTTTAGTTAAAAA TERM 560 386200 - 386181 - H 70 -2.2 -5.47218 | gap 1 GTTTAGTTAAAAAAA CATATAGCG CCT CAC-ATATG TACCACCCCCTTTAA CKL_0416 386547 - 387353 + | hypothetical protein CKL_0417 387357 - 388133 + | hypothetical protein TERM 561 388366 - 388390 + G 100 -9.3 -5.9362 | opp_overlap 388365, overlap 388369 ATCACAGAATTAACT TTAGTGGCCTT AAT AGGGCCACTTA TTTTTTTATCTTTTA TERM 562 388369 - 388387 + G 100 -11 -4.94703 | opp_overlap 388365, overlap 388366 ACAGAATTAACTTTA GTGGCCTT AAT AGGGCCAC TTATTTTTTTATCTT CKL_0418 388257 - 388418 + | hypothetical protein sodC 389062 - 388523 - | SodC TERM 563 388680 - 388665 - G 72 -2.6 -5.42259 | TTATCTGTAAAAAAA GTCATT CTAG AATAAC CATTATTAGAAAAGA TERM 564 389409 - 389374 - H 72 -6.2 -4.3208 | opp_overlap 389377 389382, overlap 389377 389382 CTTTACAATCTAAAA TAATAAAAGCCCTGGC AAAT ACCGGAGCTTTTATTG ATTAAAACATATTGA TERM 565 389406 - 389377 - H 78 -7.9 -4.27465 | opp_overlap 389377 389382, overlap 389374 389382 TACAATCTAAAATAA TAAAAGCCCTGGC AAAT ACCGGAGCTTTTA TTGATTAAAACATAT TERM 566 389627 - 389662 + H 93 -9.1 -4.78237 | opp_overlap 389626, overlap 389632 AGACAGTAAATTTAT TTTAAGCCTACCAGA AAAATC TCTGGTAGGCTTTAC TTTTATTATCACATG TERM 567 389632 - 389657 + H 100 -13.4 -4.35361 | opp_overlap 389626, overlap 389627 GTAAATTTATTTTAA GCCTACCAGA AAAATC TCTGGTAGGC TTTACTTTTATTATC CKL_0420 389826 - 390071 + | hypothetical protein TERM 568 390231 - 390259 + F 81 -10.4 -2.61548 | opp_overlap 390223 390236, overlap 390228 390236 TAGAAATTTTTATAG TAAAAGCCCTGG CAACA CCAGAGCTTTTA TGAATTATGGTAAAA TERM 569 390254 - 390236 - f 83 -8.8 -4.3467 | opp_overlap 390231 390228 390236 ATTTTTATAGTAAAA GCCCTGGC AAC ACCAGAGC TTTTATGAATTATGG TERM 570 390236 - 390254 + F 72 -5.9 -4.49337 | opp_overlap 390236, overlap 390231 390228 ATTTTTATAGTAAAA GCCCTGG CAACA CCAGAGC TTTTATGAATTATGG CKL_0421 390484 - 390861 + | hypothetical protein TERM 571 390907 - 390881 - f 89 -10.2 -3.78442 | opp_overlap 390881 390875 390882, overlap 390882 CATAACAATATAGAA CCCCCTAGCT TTATTTT AGCTAGGGGA TTTGAATTTTATATT TERM 572 390881 - 390907 + F 78 -8 -3.99216 | opp_overlap 390881 390882, overlap 390875 390882 CATAACAATATAGAA CCCCCTAGCT TTATTTT AGCTAGGGGA TTTGAATTTTATATT TERM 573 390906 - 390882 - f 89 -11.5 -2.8598 | opp_overlap 390882 390881 390875, overlap 390881 ATAACAATATAGAAC CCCCTAGCT TTATTTT AGCTAGGGG ATTTGAATTTTATAT TERM 574 390882 - 390906 + F 91 -11.5 -2.97903 | opp_overlap 390881 390882, overlap 390881 390875 ATAACAATATAGAAC CCCCTAGCT TTATTTT AGCTAGGGG ATTTGAATTTTATAT TERM 575 391146 - 391162 + F 78 -5.9 -4.82863 | CAAAACTAGGGGAAT CTGTACA ATT TGTATAG TTTATTTTGTGATTA TERM 576 391181 - 391199 + F 82 -5.2 -5.55695 | ATTTTGTGATTAAAA GGTAGGGG GTG TCTCTGCC TTTTTTATGTTATTA TERM 577 391500 - 391490 - g 71 -5.4 -4.66537 | TGTTCTAATACAAAA GCTT TAG AAGC CATACTGGATATGAA CKL_0422 391238 - 392254 + | 2-hydroxyglutaryl-CoA dehydratase-related protein CKL_0423 392260 - 393024 + | 2-hydroxyglutaryl-CoA dehydratase activator-related protein CKL_0424 393021 - 393701 + | transcriptional regulator CKL_0425 393702 - 394205 + | hypothetical protein TERM 578 394533 - 394579 + F 100 -6.8 -6.02919 | ATCACGGAATGTTAA TCTTTCGTCCTTATAAGCATAT GTA AAGTGTTTATGAGTATGAAAGA TTTTTTTATTTATAG TERM 579 395110 - 395091 - g 76 -3.6 -5.38054 | opp_overlap 395106 CTTGAGAAAGAAAAA GGATATAC TTTT ATACATCC TTTTGATGATTTGGA ilvE1 394641 - 395879 + | threonine dehydratase TERM 580 396036 - 396025 - f 80 -5.8 -5.1244 | GGAGTAATATAAAAA TGGC AAAT GCCA ATATAGATGCAAGGA TERM 581 396512 - 396526 + G 77 -10 -2.55437 | overlap 396511 396509 TAATAATTGATATGC CTCCTG GAA CAGGAG ATGTTGCTCTTACTG CKL_0427 396061 - 396912 + | nucleotide-binding protein TERM 582 397018 - 397040 + F 80 -6.3 -4.8622 | gap 1 AAATATGATTTATGA GCGGGA-CAG GTTA CTGATCCTGC TTTTTAGTTACAGAA CKL_0428 397230 - 397538 + | 2Fe-2S ferredoxin TERM 583 397642 - 397628 - T 81 -7.1 -4.78572 | CTTCAAGGAAGAAAA GCACG GTTAA CGTGC CTGGATAAGTTTTTT CKL_0429 399921 - 397741 - | methyl-accepting chemotaxis protein TERM 584 400201 - 400159 - H 87 -8.2 -4.6709 | opp_overlap 400159 400161, overlap 400154 TAAAATTATATAAAA TATTTTTATCAAATTTAAAA TCG TATTAAATTCAATAAAAATA TACTTTCATAAAATT TERM 585 400254 - 400215 - H 100 -13.4 -4.39426 | opp_overlap 400223 400225 TATACTTTCATAAAA TTTAAGTATATTTATTAC AGTT ATAATAAATATACTTAAA AATAATAATAAAGTA CKL_0430 400866 - 402038 + | ammonium transporter CKL_0431 402150 - 402515 + | nitrogen regulatory protein P-II TERM 586 402559 - 402527 - T 100 -16.7 -5.07567 | opp_overlap 402527 TTAGATCTTAAAAAA TTCAAGTATTGAATT CTA AATTCAATACTTGAA TTTTTTATACAGTTC TERM 587 402527 - 402559 + T 100 -16.7 -5.27923 | opp_overlap 402527 TTAGATCTTAAAAAA TTCAAGTATTGAATT CTA AATTCAATACTTGAA TTTTTTATACAGTTC CKL_0432 405048 - 402574 - | CoA-disulfide reductase-related protein TERM 588 403038 - 403052 + g 72 -5.8 -4.4017 | CCACAATAGTTTTAT TATCAT TAT ATGATA TTTTATAGGCGTTGG CKL_0433 405367 - 405089 - | hypothetical protein TERM 589 406279 - 406249 - g 80 -9.8 -3.55323 | opp_overlap 406259 AAAAATGGCATATAA TTCCTCATAGCTTG TGG CAAGATTTGAGGAA ACACGCCCAAAATTC CKL_0434 405561 - 406688 + | methyltransferase TERM 590 406692 - 406714 + T 100 -9.2 -5.4588 | opp_overlap 406692 GATGAAAGGTAAAAA TCAGGTATAC TAA GTACACCTGA TTTTTTCTACTTTTG TERM 591 406714 - 406692 - T 100 -11.4 -4.82855 | opp_overlap 406692 GATGAAAGGTAAAAA TCAGGTATAC TAA GTACACCTGA TTTTTTCTACTTTTG CKL_0435 408166 - 406721 - | ATP-dependent RNA helicase serA 408325 - 409287 + | hypothetical protein CKL_0437 410219 - 409359 - | transcriptional regulator TERM 592 409385 - 409405 + g 93 -6.9 -5.41143 | opp_overlap 409384 409383, overlap 409387 AAGTCTTATAATATT TATTTGGAG AAA CTCCAAACA TTTTTTTAAAAGCTC TERM 593 409387 - 409403 + g 75 -9.5 -2.89655 | opp_overlap 409384 409383, overlap 409385 GTCTTATAATATTTA TTTGGAG AAA CTCCAAA CATTTTTTTAAAAGC TERM 594 410534 - 410544 + G 80 -5.4 -5.28683 | opp_overlap 410534 TGTTTATGATAATAA TACC ACT GGTA TTTTTTAGTGTTACT CKL_0438 410383 - 411651 + | Na+/H+-dicarboxylate symporter TERM 595 412050 - 412019 - f 100 -19 -3.80858 | opp_overlap 412019 GAAGATGAATTTAAA TCCTGTCCTTTGTA TTTA TACAAAGGACAGGA TTTTTTATTTTTATA TERM 596 412019 - 412050 + F 100 -19 -5.98675 | opp_overlap 412019 GAAGATGAATTTAAA TCCTGTCCTTTGTA TTTA TACAAAGGACAGGA TTTTTTATTTTTATA CKL_0439 412091 - 413281 + | aminotransferase TERM 597 413717 - 413697 - g 71 -5.4 -4.70659 | CTGGAGAGGGAAAAA CCACTACA TCAAT TGGAGTGG CAGATGCTCTGGCAA fhs 413480 - 415156 + | formate--tetrahydrofolate ligase fchA 415177 - 415809 + | FchA folD 415867 - 416721 + | hypothetical protein TERM 598 417274 - 417233 - g 79 -4.7 -5.186 | opp_overlap 417244, overlap 417244 TAAAAGATATAAAAA TTCCATATAAATTAAATAC CACT GTATTTAATTTAACCAGAA ATAAAATCATAACTG TERM 599 417263 - 417244 - g 71 -6.6 -4.08164 | opp_overlap 417244, overlap 417233 AAAATTCCATATAAA TTAAATAC CACT GTATTTAA TTTAACCAGAAATAA CKL_0443 417001 - 418260 + | oxidoreductase CKL_0444 418288 - 418908 + | hypothetical protein TERM 600 418907 - 418936 + T 72 -6.7 -4.15366 | opp_overlap 418895 418912, overlap 418912 AATTTTTTACAAAAT AAAAATATACATA AATT TATGTATATTTTA TTTCATTATTTAAAT TERM 601 418912 - 418931 + T 84 -6.6 -5.03713 | opp_overlap 418912, overlap 418907 TTTACAAAATAAAAA TATACATA AATT TATGTATA TTTTATTTCATTATT TERM 602 418931 - 418912 - T 91 -6.6 -5.54907 | opp_overlap 418912 418907 TTTACAAAATAAAAA TATACATA AATT TATGTATA TTTTATTTCATTATT CKL_0445 419574 - 418942 - | hypothetical protein gcp 419745 - 420770 + | O-sialoglycoprotein endopeptidase TERM 603 420877 - 420836 - f 73 -5.4 -4.74539 | opp_overlap 420838 420841, overlap 420838 420841 AATAATTCAAGAAAA TGTAACATATATGACACT AAATTA AATGTCATATATGTTATT ATTGTTACTATATTT TERM 604 420838 - 420875 + F 91 -10.2 -4.02163 | opp_overlap 420836 420838 420841, overlap 420841 TAATTCAAGAAAATG TAACATATATGACACT AAATTA AATGTCATATATGTTA TTATTGTTACTATAT TERM 605 420875 - 420838 - f 93 -12.4 -2.64773 | opp_overlap 420838 420841, overlap 420836 420841 TAATTCAAGAAAATG TAACATATATGACACT AAATTA AATGTCATATATGTTA TTATTGTTACTATAT TERM 606 420872 - 420841 - f 82 -9.7 -3.45634 | opp_overlap 420838 420841, overlap 420838 420836 TTCAAGAAAATGTAA CATATATGACACT AAATTA AATGTCATATATG TTATTATTGTTACTA TERM 607 420841 - 420872 + F 77 -7.5 -4.1157 | opp_overlap 420841 420838 420836, overlap 420838 TTCAAGAAAATGTAA CATATATGACACT AAATTA AATGTCATATATG TTATTATTGTTACTA TERM 608 422848 - 422832 - g 74 -9.5 -2.54632 | overlap 422820 422831 422830 TAATTGGATAAAATC CCAAAAG AAA CTTTTGG TTACAGATACTACCA pyc 421258 - 424698 + | pyruvate carboxylase TERM 609 424786 - 424831 + F 100 -11.7 -5.43621 | gap 1, opp_overlap 424780 424783 424786, overlap 424788 ATTATTATATAAGTA G-GCACTATTTAAAATTTTTTA AGA TAAGAAATTTTAAATAGTGTTC TTTTTTATAATTTAT TERM 610 424788 - 424828 + F 100 -16.7 -4.75967 | opp_overlap 424780 424786 424783, overlap 424786 TATTATATAAGTAGG CACTATTTAAAATTTTTTA AGA TAAGAAATTTTAAATAGTG TTCTTTTTTATAATT CKL_0448 424941 - 425801 + | hypothetical protein TERM 611 426675 - 426687 + G 73 -7.7 -3.60805 | ACAGCTTTCTTTTGA TTCCC AAA GGGAA TTTACAATAAAATAT CKL_0449 425884 - 428805 + | peptidase CKL_0450 429069 - 429344 + | hypothetical protein CKL_0451 429511 - 430044 + | response regulator CKL_0452 432008 - 430098 - | ABC transporter ATPase TERM 612 430369 - 430389 + g 93 -3.4 -6.37666 | gap 1 TTTGAAATACTTATC TCCTCTTGA AATC TCAA-AGGA TTTTTTTTCTTTTCT TERM 613 430405 - 430433 + g 70 -4 -4.96468 | gap 1, opp_overlap 430413, overlap 430406 430410 TTTTTTTTCTTTTCT GTATA-GTAGGTA TAAT TACCTACATATTC TTTTATTTCACTTTG TERM 614 430406 - 430430 + g 71 -5.2 -4.5493 | gap 1, opp_overlap 430413, overlap 430405 430410 TTTTTTTCTTTTCTG TATAGTAGGTA TAAT TACCTAC-ATA TTCTTTTATTTCACT TERM 615 430410 - 430427 + g 71 -8.5 -2.90316 | opp_overlap 430413, overlap 430406 430405 TTTCTTTTCTGTATA GTAGGTA TAAT TACCTAC ATATTCTTTTATTTC TERM 616 430807 - 430825 + g 77 -7.6 -3.96486 | overlap 430805 TCAGATTGTTCCTGA TCATAATA CCC TATTATGA TATTTTTACCTAATT TERM 617 432395 - 432360 - g 74 -7.8 -3.86194 | gap 1, opp_overlap 432363 432373, overlap 432348 432362 432364 432365 AATGTCTGTTATAAA GAGACTGCCTAAATATC ATA GATATTTAGGCAA-CTT AATGAGAAATGATGT TERM 618 432393 - 432362 - g 85 -10.4 -3.51934 | gap 1, opp_overlap 432363 432373, overlap 432348 432360 432364 432365 TGTCTGTTATAAAGA GACTGCCTAAATATC ATA GATATTTAGGCAA-C TTAATGAGAAATGAT TERM 619 432363 - 432393 + G 70 -8.4 -3.1505 | opp_overlap 432348 432362 432360 432364 432365, overlap 432373 GTCTGTTATAAAGAG ACTGCCTAAATATC ATA GATATTTAGGCAAC TTAATGAGAAATGAT TERM 620 432392 - 432364 - g 100 -14.1 -3.3353 | opp_overlap 432363 432373, overlap 432362 432360 432365 TCTGTTATAAAGAGA CTGCCTAAATATC ATA GATATTTAGGCAA CTTAATGAGAAATGA TERM 621 432391 - 432365 - g 100 -15.4 -2.59797 | opp_overlap 432363 432373, overlap 432364 432362 432360 CTGTTATAAAGAGAC TGCCTAAATATC ATA GATATTTAGGCA ACTTAATGAGAAATG CKL_0453 432322 - 432954 + | redox-sensing transcriptional repressor Rex TERM 622 432987 - 433029 + F 84 -10.4 -3.11738 | opp_overlap 432992, overlap 432992 432997 TTTTATCGTAAATGC TAAAATGAAATATTAAATAA AAT TTATTTAATATTTTATATTA ATTTATATTGAAATA TERM 623 432992 - 433024 + F 88 -10.3 -3.41709 | opp_overlap 432992, overlap 432987 432997 TCGTAAATGCTAAAA TGAAATATTAAATAA AAT TTATTTAATATTTTA TATTAATTTATATTG TERM 624 433024 - 432992 - f 80 -8.1 -4.24002 | opp_overlap 432987 432992 432997 TCGTAAATGCTAAAA TGAAATATTAAATAA AAT TTATTTAATATTTTA TATTAATTTATATTG TERM 625 432997 - 433019 + F 87 -8 -4.76274 | opp_overlap 432992, overlap 432992 432987 AATGCTAAAATGAAA TATTAAATAA AAT TTATTTAATA TTTTATATTAATTTA TERM 626 433068 - 433091 + F 73 -5.4 -4.75356 | opp_overlap 433072, overlap 433072 TAAGGTATATAATAA TAAATGAAGT GAAA ACTTCAATTA TTTTTAAGTGTATTT TERM 627 433087 - 433072 - f 74 -6.2 -4.55093 | opp_overlap 433068 433072 GTATATAATAATAAA TGAAGT GAAA ACTTCA ATTATTTTTAAGTGT TERM 628 433482 - 433460 - g 89 -7.8 -4.97402 | opp_overlap 433460 433459 GAAAATTTAGAAAAA CCAGTTATAG CAG CTATAAATGG ATTTGCACTGGGTGG crt1 433169 - 433948 + | 3-hydroxybutyryl-CoA dehydratase TERM 629 434166 - 434154 - g 72 -4.9 -4.85267 | ACAAACGAGCAAAAA TTTGT AGA ACAAA TGGTAAGTGAATTTA bcd 434124 - 435263 + | acyl-CoA dehydrogenase family protein etfB1 435280 - 436059 + | EtfB1 etfA1 436079 - 437083 + | EtfA1 TERM 630 437172 - 437136 - f 78 -8.7 -3.86897 | opp_overlap 437132 TCTATGTGTTAGAAA CCTCCCCTGCAGTATCA ATA TAGTATTGCAGTGGAGG AAACTATATGAATAA hbd1 437268 - 438116 + | Hbd1 TERM 631 438182 - 438214 + F 82 -4.3 -5.69379 | opp_overlap 438171, overlap 438184 ATAATAATTAAAAAG AATTTTGGGCTAATT AAT GATTAGTCTAAAATC TTTTTTTAATTATAT TERM 632 438184 - 438212 + F 76 -6.9 -4.46828 | opp_overlap 438171, overlap 438182 AATAATTAAAAAGAA TTTTGGGCTAATT AAT GATTAGTCTAAAA TCTTTTTTTAATTAT CKL_0459 438364 - 439257 + | ferredoxin--NADP(+) reductase subunit alpha CKL_0460 439257 - 440648 + | putative oxidoreductase TERM 633 440665 - 440693 + F 100 -15.5 -5.0916 | opp_overlap 440665 CTATTTTCTAGAAAA GCTGTATTAGGTT AAT GACCTAATACAGC TTTTTATATTGGCAG TERM 634 440693 - 440665 - f 100 -14.8 -4.37886 | opp_overlap 440665 CTATTTTCTAGAAAA GCTGTATTAGGT TAATG ACCTAATACAGC TTTTTATATTGGCAG TERM 635 441365 - 441377 + G 71 -7.7 -3.53224 | opp_overlap 441364 441359 441360 TAGAGGAAATGGAAG CCTGT GGA ACAGG TTTCAGAGCAAAATA CKL_0461 440845 - 441753 + | 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase TERM 636 442185 - 442209 + G 90 -12.3 -2.9914 | opp_overlap 442185 442186 442188 CTATTATAGGCATAA TCATAGGCAAT ATA ATTGCCTATGG TATATCTAGGCGCTG TERM 637 442209 - 442185 - g 84 -10.1 -3.40299 | opp_overlap 442185, overlap 442186 442188 CTATTATAGGCATAA TCATAGGCAAT ATA ATTGCCTATGG TATATCTAGGCGCTG TERM 638 442208 - 442186 - g 100 -13.6 -2.63858 | opp_overlap 442185, overlap 442185 442188 TATTATAGGCATAAT CATAGGCAAT ATA ATTGCCTATG GTATATCTAGGCGCT TERM 639 442206 - 442188 - g 81 -10.4 -2.85712 | opp_overlap 442185, overlap 442186 442185 TTATAGGCATAATCA TAGGCAAT ATA ATTGCCTA TGGTATATCTAGGCG TERM 640 442299 - 442322 + G 78 -9.8 -3.35539 | opp_overlap 442311, overlap 442297 442295 TATTAGATTTAGGCA GTATAAATAC CATA GTATTTATAC TATATTTAATTCCTG CKL_0462 441884 - 442603 + | hypothetical protein groS 442958 - 443242 + | co-chaperonin GroES TERM 641 444338 - 444324 - g 71 -2.9 -5.26918 | overlap 444333 AGAGGGGATAAAAAA TCTAT ACAAG ATAGA GTATCCCAGATTAAA groL 443310 - 444944 + | chaperonin GroEL TERM 642 445015 - 444957 - f 100 -12.9 -3.48994 | gap 1, opp_overlap 444970 444971 444974, overlap 444968 444970 TAAAAATATGTATAA CTTAAAACAAATA-TTGACCCGATATCT ATTT AGATATCGGGTTAGTTTTTTGTTTTAAG AATATTATAAATTCA TERM 643 445003 - 444968 - f 77 -6.2 -4.73092 | opp_overlap 444970 444971 444974, overlap 444957 444970 ATAACTTAAAACAAA TATTGACCCGATATCT ATTT AGATATCGGGTTAGTT TTTTGTTTTAAGAAT TERM 644 444970 - 445001 + F 100 -13.2 -5.79595 | opp_overlap 444970 444968 444957, overlap 444971 444974 AACTTAAAACAAATA TTGACCCGATATCT ATTT AGATATCGGGTTAG TTTTTTGTTTTAAGA TERM 645 445001 - 444970 - f 80 -8.8 -3.96379 | opp_overlap 444970 444971 444974, overlap 444968 444957 AACTTAAAACAAATA TTGACCCGATATCT ATTT AGATATCGGGTTAG TTTTTTGTTTTAAGA TERM 646 444971 - 445000 + F 100 -14.5 -4.0613 | opp_overlap 444970 444968 444957, overlap 444970 444974 ACTTAAAACAAATAT TGACCCGATATCT ATTT AGATATCGGGTTA GTTTTTTGTTTTAAG TERM 647 444974 - 444997 + F 100 -14 -4.09805 | opp_overlap 444970 444968 444957, overlap 444971 444970 TAAAACAAATATTGA CCCGATATCT ATTT AGATATCGGG TTAGTTTTTTGTTTT guaB 445313 - 446767 + | inositol-5-monophosphate dehydrogenase guaA 446920 - 448452 + | bifunctional GMP synthase/glutamine amidotransferase protein CKL_0467 448586 - 449551 + | recombinase TERM 648 449599 - 449609 + G 71 -5.4 -4.63218 | opp_overlap 449593, overlap 449593 449591 AAAATTATATTTAAG CCAT TAA ATGG TTTTGTTGACCCAGG CKL_0468 449551 - 449922 + | hypothetical protein CKL_0469 449929 - 450486 + | hypothetical protein TERM 649 450535 - 450504 - f 75 -7.5 -4.03085 | GTACAAAAAGTTAAA GAGATTATATAAG TTGCAC CCCATATAATCTC AACACATACACAATA CKL_0470 451040 - 451270 + | hypothetical protein TERM 650 451317 - 451304 - g 75 -2.5 -5.69793 | ATATGAAAGAAAAAA TAAAT CTGT ATTTA GATGACCTACGAGAT TERM 651 451457 - 451444 - g 74 -5.3 -4.90906 | opp_overlap 451454 GGAGAAGATGAAAAA GGTAA TTTG TTACC AACAGGGTATGATTT CKL_0471 451291 - 451653 + | hypothetical protein CKL_0472 451660 - 451998 + | hypothetical protein CKL_0473 452238 - 453236 + | hypothetical protein CKL_0474 453256 - 453768 + | hypothetical protein CKL_0475 454350 - 455417 + | hypothetical protein TERM 652 455404 - 455430 + F 87 -8.1 -4.67607 | opp_overlap 455404 455408, overlap 455408 455426 CAATGAATTTTATAA GGAAGCAAGGA TAATT TCTTTGCTTTC TTTATTTATTAAAGG TERM 653 455408 - 455426 + F 75 -5.3 -4.86861 | opp_overlap 455408 455404, overlap 455404 GAATTTTATAAGGAA GCAAGGA TAATT TCTTTGC TTTCTTTATTTATTA CKL_0476 455559 - 456209 + | hypothetical protein TERM 654 456377 - 456362 - g 74 -6.2 -4.38876 | TGAAAAACAGACAAA GAACTA ATAT TAGTTC AGAAGAAGCATTAAA CKL_0477 456319 - 456471 + | hypothetical protein CKL_0478 456487 - 456888 + | hypothetical protein TERM 655 456963 - 456942 - f 82 -8.9 -3.77177 | opp_overlap 456942, overlap 456945 ATTAAGATATTTAAA GAACTTATA GCAA TATAAGTTC TTTTTTAATGCAAAA TERM 656 456942 - 456963 + F 95 -8.9 -5.14563 | opp_overlap 456942 456945 ATTAAGATATTTAAA GAACTTATA GCAA TATAAGTTC TTTTTTAATGCAAAA CKL_0479 457005 - 457409 + | hypothetical protein TERM 657 458377 - 458416 + G 77 -3 -5.63517 | AAAAAATAATATAAC TGATTTACCATTAGAATT ACAA AAGTTTTATGGTAGGTCA TTTTTTATTTACCAA CKL_0480 457409 - 458974 + | hypothetical protein CKL_0481 458990 - 460009 + | hypothetical protein TERM 658 460045 - 460056 + F 73 -4.4 -5.13354 | TAATATCGAGTTGTA CTGA GTAG TCAG TTTCTTTTTTATAAC TERM 659 460401 - 460431 + F 76 -8.4 -3.55368 | opp_overlap 460404 460406, overlap 460404 TTCATATGATATTTA CAAGATCGCTAAAT TAT ATTTAGCGAAGTTG TTATATCAATTGAGT TERM 660 460426 - 460406 - f 93 -11.3 -3.2699 | opp_overlap 460404 460401, overlap 460404 ATGATATTTACAAGA TCGCTAAAT TAT ATTTAGCGA AGTTGTTATATCAAT CKL_0482 460689 - 460943 + | hypothetical protein TERM 661 461000 - 461020 + F 71 -2.5 -5.4251 | AATGAAGATTAAAAG GGCGTCC AATTAGA GGATGTC TTTTTTATATCTAAA CKL_0483 461057 - 461359 + | hypothetical protein CKL_0484 461421 - 461783 + | hypothetical protein CKL_0485 461788 - 462930 + | hypothetical protein CKL_0486 463192 - 463329 + | GMP synthase TERM 662 463396 - 463441 + F 89 -7.9 -5.10077 | opp_overlap 463405, overlap 463398 463405 GTTGAATAATTAAGT TAGTGAAAAGTAATTAGGATA GAAA TATCTTAGTTACTTTTTTCTG TTTTTTGCAGTGTTT TERM 663 463398 - 463439 + F 80 -8.3 -4.16351 | opp_overlap 463405, overlap 463396 463405 TGAATAATTAAGTTA GTGAAAAGTAATTAGGATA GAAA TATCTTAGTTACTTTTTTC TGTTTTTTGCAGTGT TERM 664 463405 - 463432 + F 100 -7.2 -5.72118 | opp_overlap 463405, overlap 463398 463396 TTAAGTTAGTGAAAA GTAATTAGGATA GAAA TATCTTAGTTAC TTTTTTCTGTTTTTT CKL_0487 463844 - 464521 + | manganese catalase TERM 665 464530 - 464547 + F 86 -9.1 -4.29106 | opp_overlap 464529 464530 464532 AAGATAAGTTGAAAG GAGCTCC TAAC GGGGCTC TTTCTTCATCTCCAA CKL_0488 464719 - 464892 + | hypothetical protein CKL_0489 465231 - 465070 - | hypothetical protein TERM 666 465108 - 465136 + g 100 -14.8 -2.53015 | opp_overlap 465108 465113, overlap 465113 TAAGAATCTTTATAA TAAAAGCTCTGG CAAAA CCAGAGCTTTTA TAGATTAAAACATAT TERM 667 465136 - 465108 - G 100 -15.5 -3.34947 | opp_overlap 465108 465113, overlap 465113 TAAGAATCTTTATAA TAAAAGCTCTGGC AAA ACCAGAGCTTTTA TAGATTAAAACATAT TERM 668 465113 - 465131 + g 95 -10.3 -4.4715 | opp_overlap 465113 465108, overlap 465108 ATCTTTATAATAAAA GCTCTGG CAAAA CCAGAGC TTTTATAGATTAAAA TERM 669 465131 - 465113 - G 100 -11 -4.77567 | opp_overlap 465108 465113, overlap 465108 ATCTTTATAATAAAA GCTCTGGC AAA ACCAGAGC TTTTATAGATTAAAA CKL_0490 466323 - 465292 - | esterase CKL_0491 466736 - 467032 + | hypothetical protein CKL_0492 467038 - 467235 + | transcriptional regulator CKL_0493 467513 - 467683 + | hypothetical protein CKL_0494 468734 - 468009 - | hypothetical protein CKL_0495 469264 - 468935 - | hypothetical protein CKL_0496 470160 - 470675 + | VanZ-related protein TERM 670 470732 - 470752 + F 77 -4.7 -5.23943 | opp_overlap 470732 AGGCATTAGAAATAA GAGGTATGT GTA ATTTACCTC TTTATTTTTTTGGTG TERM 671 471282 - 471260 - f 74 -6.5 -4.56736 | opp_overlap 471260 471259 471264, overlap 471264 ATGTAACAAGTAAAA TAAATATCA TCAAT TGATATTTA ATACTTTTTAACGTA CKL_0497 471810 - 472274 + | hypothetical protein CKL_0498 472687 - 472418 - | hypothetical protein CKL_0499 473213 - 473902 + | hydrolase CKL_0500 474449 - 473988 - | hypothetical protein TERM 672 474569 - 474592 + r 75 -9.6 -2.64993 | opp_overlap 474569, overlap 474568 474562 TAAAATATGATAAGA CCTGTACCTT GATT AGGGTGCAGG CTTCATCTTGTAAAT CKL_0501 474919 - 474692 - | hypothetical protein TERM 673 474806 - 474827 + g 70 -7.3 -3.74519 | overlap 474809 CTCAATTATATGCTC TCTTGCCAT CATT ATGGCATGA TTTAATGGAAGTATT CKL_0502 475339 - 475686 + | GTPase CKL_0503 475812 - 476024 + | GTPase CKL_0504 476042 - 476359 + | hypothetical protein TERM 674 476491 - 476461 - T 71 -7.7 -3.60151 | opp_overlap 476459 476461 TTCCCTAAAGGATAA GTATTCTAAGTGC TAAAG ACACTAAGAATAC TGTTAATATGGTTCA CKL_0505 477059 - 476646 - | thioesterase CKL_0506 477328 - 477921 + | transcriptional regulator TERM 675 477936 - 477974 + F 100 -11.2 -4.46233 | opp_overlap 477939, overlap 477937 477939 477941 ATGGGTAAAAATGGT AAATGGCCATAAGGTATT TAA AATACCTTATGGCTATAA TTTATTTAGCATTGA TERM 676 477937 - 477973 + F 100 -14.7 -3.27017 | opp_overlap 477939, overlap 477936 477939 477941 TGGGTAAAAATGGTA AATGGCCATAAGGTATT TAA AATACCTTATGGCTATA ATTTATTTAGCATTG TERM 677 477971 - 477939 - f 100 -15.1 -3.8046 | opp_overlap 477937 477936 477939 477941 GGTAAAAATGGTAAA TGGCCATAAGGTATT TAA AATACCTTATGGCTA TAATTTATTTAGCAT TERM 678 477939 - 477971 + F 100 -17.3 -3.18854 | opp_overlap 477939, overlap 477937 477936 477941 GGTAAAAATGGTAAA TGGCCATAAGGTATT TAA AATACCTTATGGCTA TAATTTATTTAGCAT TERM 679 477941 - 477969 + F 100 -17.7 -3.14807 | opp_overlap 477939, overlap 477939 477937 477936 TAAAAATGGTAAATG GCCATAAGGTATT TAA AATACCTTATGGC TATAATTTATTTAGC TERM 680 479126 - 479112 - g 70 -4.2 -5.0925 | overlap 479113 TGCTAAAACTAAAAA TCCTGT GAG ACAGGC CCTTGTGTCTATGAC TERM 681 479125 - 479113 - g 73 -7.7 -3.64465 | overlap 479112 GCTAAAACTAAAAAT CCTGT GAG ACAGG CCCTTGTGTCTATGA CKL_0507 478240 - 479631 + | sodium:alanine symporter TERM 682 479862 - 479893 + F 100 -8.8 -5.58209 | opp_overlap 479854 479871, overlap 479854 479865 TAAATATGACTTTTA GGGTGGAAAGTCCT TTAT AGGACTTTCCATTA TTTTTTTAAATTTAG TERM 683 479865 - 479890 + F 100 -14.9 -4.83715 | opp_overlap 479854 479871, overlap 479854 479862 ATATGACTTTTAGGG TGGAAAGTCCT TTAT AGGACTTTCCA TTATTTTTTTAAATT napA 479918 - 481099 + | NapA TERM 684 481155 - 481195 + F 100 -10.7 -4.56961 | opp_overlap 481192, overlap 481193 ATTATTGATTGTGGA TAACTATTTGGGCAGTGAT ATC ATCACTTCTTGAATAGTTA TTTTATATAAATATT TERM 685 481229 - 481219 - f 71 -2.6 -5.38321 | opp_overlap 481193 481219, overlap 481192 481209 AAATATTATAAAAAA TAAT TGC ATTA ATTTCTATAAAAACT TERM 686 481900 - 481914 + G 81 -10 -3.04248 | ATTGTTATTGCTACA GGTTCC GGG GGAACC TATTCAGGACTGTTA CKL_0509 481333 - 482322 + | D-cysteine desulfhydrase TERM 687 482594 - 482611 + G 74 -7.7 -3.77464 | AGCAGTGCTTTTTGT GCTTCCA TGAT TGGAGGC TTTGCTGACTGGTAT TERM 688 482942 - 482957 + G 76 -6.2 -4.56978 | TTGATGGAGTTTAAT TTATGG AAAG CCATAA TTTCTTCTTTGCAGA CKL_0510 482483 - 483703 + | hypothetical protein CKL_0511 483756 - 485090 + | hypothetical protein TERM 689 485125 - 485167 + F 76 -7.2 -4.42748 | opp_overlap 485125 485123 CAGTAAGTATAAACA TGACAATATAGTCCTTAACA GTT TGTTATTGATAATATTGTCA TTATTTTTCCAATAG TERM 690 485606 - 485588 - g 77 -3.1 -5.52096 | opp_overlap 485588, overlap 485590 AAAGGCAACAAAAAA TGCAGCT AGGAA AGCTGGA TTTAATGTGCTTAGG TERM 691 486412 - 486424 + G 72 -9.1 -2.63164 | overlap 486411 AAAATACGTTATTAC CCTGC CAG GCAGG CTTGATTGCCTATAC dnaK1 485199 - 486764 + | DnaK1 dnaK2 486780 - 488354 + | DnaK2 dnaK3 488445 - 489935 + | DnaK3 TERM 692 491660 - 491635 - g 70 -4.1 -4.93898 | overlap 491646 ATAGTATTACAAAAA GAACATATAAT TGAG AGCATATGTTC TCAGGCCATAAGCGG dnaK4 489970 - 491784 + | DnaK4 CKL_0516 491808 - 493076 + | hypothetical protein CKL_0517 493114 - 493851 + | hypothetical protein TERM 693 494850 - 494879 + G 71 -5.2 -4.62984 | TGTTACAGATAAAGT TTTTTTACTTTC AACAGA GGAAGTGAAAAA TTTTGTCTATGATAG CKL_0518 493888 - 495129 + | hypothetical protein TERM 694 495155 - 495174 + F 86 -7.2 -5.1167 | TTTATTTTATGTTTT TAATGGCG ATCT TGCCATTA TTTTTGTATTGAGTT TERM 695 495485 - 495468 - g 89 -8.5 -4.62168 | opp_overlap 495467 495465 495483, overlap 495483 ATTTAAAGGATAAAA CTACTTC AGAG GAAGTAG GTATTCCCTATAATT TERM 696 495828 - 495812 - g 78 -9.5 -3.30619 | opp_overlap 495815 AATGACCTGGGAGAA GTAGTAG GAG CTACTAC ATTGGAGGCTACCAT CKL_0519 495257 - 497284 + | surface-layer protein TERM 697 497282 - 497323 + F 100 -14.1 -4.99035 | gap 1, opp_overlap 497282 497286 497288 497289, overlap 497286 497289 GTTAGTGCAGAAGAA TAAATATTAGAAGGGGTGGT GTA AACACCCCTTCTA-TATTTA TTTTTATGTGGATAA TERM 698 497323 - 497282 - f 100 -14.1 -3.80733 | gap 1, opp_overlap 497282 497286 497289, overlap 497286 497288 497289 GTTAGTGCAGAAGAA TAAATATTAGAAGGGGTGGT GTA AACACCCCTTCTA-TATTTA TTTTTATGTGGATAA TERM 699 497286 - 497319 + F 100 -10.5 -5.01422 | gap 1, opp_overlap 497282 497286 497288 497289, overlap 497282 497289 GTGCAGAAGAATAAA TATTAGAAGGGGTGGT GTA AACACCCCTTCTA-TA TTTATTTTTATGTGG TERM 700 497319 - 497286 - f 93 -10.5 -4.51812 | gap 1, opp_overlap 497286 497282 497289, overlap 497282 497288 497289 GTGCAGAAGAATAAA TATTAGAAGGGGTGGT GTA AACACCCCTTCTA-TA TTTATTTTTATGTGG TERM 701 497318 - 497288 - f 93 -11.2 -3.86244 | opp_overlap 497286 497282 497289, overlap 497286 497282 497289 GCAGAAGAATAAATA TTAGAAGGGGTGGT GTA AACACCCCTTCTAT ATTTATTTTTATGTG TERM 702 497317 - 497289 - f 100 -14.7 -2.90662 | opp_overlap 497286 497282 497289, overlap 497288 497286 497282 CAGAAGAATAAATAT TAGAAGGGGTGGT GTA AACACCCCTTCTA TATTTATTTTTATGT TERM 703 497289 - 497317 + F 100 -14.7 -4.10863 | opp_overlap 497289 497288 497286 497282, overlap 497286 497282 CAGAAGAATAAATAT TAGAAGGGGTGGT GTA AACACCCCTTCTA TATTTATTTTTATGT TERM 704 497882 - 497892 + G 70 -4 -5.01732 | opp_overlap 497882 CTGGGGATATTCAAA TATC AGT GATA TTTTTTCAAGGGCTT CKL_0520 497487 - 499322 + | hypothetical protein TERM 705 499381 - 499348 - f 70 -8.5 -2.66873 | opp_overlap 499357, overlap 499347 499345 AGGGGTATTAAATAG TTTTATTAATTCATA AGTC TATGAATTGATAAAA TAACAAAATATTATT TERM 706 500028 - 500014 - g 77 -10 -2.62935 | overlap 500013 500011 AGAACTGTGAAATAT GGATGG CAT CCATCC CAAATGGTAAAAATG CKL_0521 499435 - 500418 + | extracellular substrate-binding protein CKL_0522 500415 - 501104 + | nickel binding GTPase CKL_0523 501171 - 501977 + | ABC transporter ATPase CKL_0524 502282 - 502743 + | hypothetical protein TERM 707 503368 - 503334 - f 73 -8.7 -2.98493 | opp_overlap 503334, overlap 503331 503336 TTGACTAGGAAACTA GAGGCTATATTTTTC TTATT GGAGAATATAGCCTC TTTTTGAAAAGTATG TERM 708 503334 - 503368 + F 100 -13.1 -4.59109 | opp_overlap 503334 503331 503336 TTGACTAGGAAACTA GAGGCTATATTTTTC TTATT GGAGAATATAGCCTC TTTTTGAAAAGTATG CKL_0525 503493 - 503933 + | NifB-related protein CKL_0526 504107 - 504391 + | cysteine synthase CKL_0527 504862 - 506010 + | nitrogenase molybdenum-iron protein CKL_0528 506847 - 506413 - | hypothetical protein CKL_0529 507408 - 506860 - | transcriptional regulator CKL_0530 507957 - 507427 - | hypothetical protein TERM 709 507613 - 507601 - G 77 -7.7 -4.07535 | opp_overlap 507589 AACCTCTATAAATAA TGGAG ATT CTCCA AAGCCTTTTTTGTAT TERM 710 507638 - 507658 + g 72 -2.5 -5.32882 | TTGTATCCACTTTTA GCTTCATAC ATA GTATAGGGC TTTTTTATCATAATA CKL_0531 509334 - 507961 - | iron-sulfur flavoprotein TERM 711 509459 - 509513 + H 70 -6.1 -4.08945 | opp_overlap 509464 509470 509495, overlap 509470 509473 GTATTTATGAAGTGA GTAAATAGAAATAACTACATATTTA AATAA TAAATATGTAGTTATTTCTACAAAA TTTTCAAAAAATAGT TERM 712 509508 - 509464 - H 100 -19.2 -3.80114 | opp_overlap 509459 509470 509473, overlap 509470 509495 TATGAAGTGAGTAAA TAGAAATAACTACATATTTA AATAA TAAATATGTAGTTATTTCTA CAAAATTTTCAAAAA TERM 713 509470 - 509502 + H 100 -12.4 -3.88985 | opp_overlap 509464 509470 509495, overlap 509459 509473 GTGAGTAAATAGAAA TAACTACATATTTA AATAA TAAATATGTAGTTA TTTCTACAAAATTTT TERM 714 509502 - 509470 - H 100 -12.4 -4.36903 | opp_overlap 509470 509459 509473, overlap 509464 509495 GTGAGTAAATAGAAA TAACTACATATTTA AATAA TAAATATGTAGTTA TTTCTACAAAATTTT TERM 715 509473 - 509499 + H 87 -9.7 -4.06687 | opp_overlap 509470 509464 509495, overlap 509470 509459 AGTAAATAGAAATAA CTACATATTTA AATAA TAAATATGTAG TTATTTCTACAAAAT CKL_0532 509583 - 510410 + | lipase TERM 716 510452 - 510483 + F 91 -8.2 -5.02502 | gap 1, opp_overlap 510454 510456 510463, overlap 510454 ATAGTTTTTACAGAT TACAGCTTAAATGCA CTT TGCATT-AAGCTGAA TTTTTATATGGTATA TERM 717 510481 - 510454 - f 84 -10.8 -2.6927 | gap 1, opp_overlap 510452 510454, overlap 510456 510463 AGTTTTTACAGATTA CAGCTTAAATGCA CTT TGCATT-AAGCTG AATTTTTATATGGTA TERM 718 510454 - 510481 + F 84 -10.8 -2.75165 | gap 1, opp_overlap 510454 510456 510463, overlap 510452 AGTTTTTACAGATTA CAGCTTAAATGCA CTT TGCATT-AAGCTG AATTTTTATATGGTA CKL_0533 510542 - 510763 + | hypothetical protein CKL_0534 510801 - 511358 + | carbonic anhydrase-related protein CKL_0535 511532 - 511792 + | hypothetical protein TERM 719 511810 - 511821 + T 73 -3 -5.40474 | overlap 511803 511808 AAGCTTTCTTAGATT CAAT CTGA ATTG TTTTTTTACAGCACT TERM 720 511841 - 511868 + T 81 -7.1 -4.80882 | opp_overlap 511841 511835 TTTACAGCACTAAAA GATTCCTGTGA CTGTTA TCATGGGAATC TTTTTGATATAAAAT CKL_0536 512188 - 511961 - | small acid-soluble spore protein Tlp CKL_0537 512535 - 514007 + | hypothetical protein TERM 721 514077 - 514103 + T 84 -6 -5.21709 | gap 1, opp_overlap 514077 GCTCTTGGATAAAAA GATTCCCA-GA CTTATA TCATGGGAATC TTTTTTGCTGTAAAG TERM 722 514103 - 514077 - T 83 -6.7 -4.82901 | gap 1, opp_overlap 514077 GCTCTTGGATAAAAA GATTCCCA-GAC TTAT ATCATGGGAATC TTTTTTGCTGTAAAG tgl 514927 - 514124 - | transglutaminase TERM 723 514678 - 514691 + g 71 -8.1 -3.22877 | CTTGTTTTGTCCTTT CCCAG TACT CTGGG TTGCATATTGATTTA CKL_0539 515913 - 514924 - | hypothetical protein TERM 724 515054 - 515091 + g 100 -8.7 -5.52384 | opp_overlap 515057 AGCACTTTGGTATTA GAATCCAATTTCTTAAA CTGG TCTAATAAATTGGATTC TTTTTTTGATGGAGA CKL_0540 516475 - 516005 - | hypothetical protein TERM 725 516524 - 516561 + r 95 -11.7 -3.17571 | gap 1, overlap 516525 516535 TTAGTGGAATTTTAT G-TTTTAGAGAATCATTT TTA AAGTGATTCTCTAAAATC TTCCGTTAAAGAATT TERM 726 516525 - 516559 + r 100 -15.4 -3.14878 | overlap 516524 516535 TAGTGGAATTTTATG TTTTAGAGAATCATTT TTA AAGTGATTCTCTAAAA TCTTCCGTTAAAGAA CKL_0541 518650 - 516554 - | aminopeptidase-related protein TERM 727 519966 - 519956 - g 72 -2.6 -5.38047 | opp_overlap 519963, overlap 519963 CAGTGATAGAAAAAA TAAA AGT TTTA TAGCGATAAATTGTG stc 518838 - 520736 + | Stc TERM 728 520809 - 520754 - f 78 -9.4 -3.11701 | opp_overlap 520756 520758 520780 520781, overlap 520753 520756 520769 520777 520790 TGTATGAAAAAACAG CACTGTTGCAAAAAACAACACTATTT CTTA AAAAAATGTTGCTTTTTACAACAATT TTTTAAATAATTATT TERM 729 520807 - 520756 - f 95 -12 -3.10583 | opp_overlap 520756 520758 520780 520781, overlap 520754 520753 520769 520777 520790 TATGAAAAAACAGCA CTGTTGCAAAAAACAACACTATTT CTTA AAAAAATGTTGCTTTTTACAACAA TTTTTTAAATAATTA TERM 730 520794 - 520769 - f 71 -4.1 -5.0133 | opp_overlap 520758 520756 520780 520781, overlap 520756 520754 520753 520777 520790 CACTGTTGCAAAAAA CAACACTATTT CTTA AAAAAATGTTG CTTTTTACAACAATT TERM 731 520806 - 520790 - f 73 -3 -5.41143 | opp_overlap 520758 520756 520781 520780, overlap 520769 520756 520754 520753 520777 TATTTCTTAAAAAAA TGTTGC TTTTT ACAACA ATTTTTTAAATAATT adh1 520971 - 522137 + | Adh1 TERM 732 522247 - 522225 - T 100 -10.7 -4.57063 | opp_overlap 522228 TCAAAAGATAATAAA GAATGTGGA TTTTG TCCACATTC TAACTGTTTATATTT CKL_0544 523639 - 522302 - | transporter protein TERM 733 524213 - 524200 - g 74 -3.9 -5.1361 | ACAAAGTTTAAAAAA CAATT TACA AATTG CAGATGCCAAAATAA TERM 734 524519 - 524492 - g 88 -8.6 -4.3902 | opp_overlap 524490 ACTAGAAAAACTAAA CCAATGTCTTTC AATA AAAAAACATTGG TGTCCATTACATCCA CKL_0545 523973 - 524998 + | hypothetical protein idh 526327 - 525122 - | isocitrate dehydrogenase TERM 735 526407 - 526423 + H 74 -6.6 -4.26903 | opp_overlap 526407 526402 GAAATAGACAGTACA TGCAAG TTAGC CTTGCA TTTTACTAACGTCAG CKL_0547 526650 - 527216 + | hypothetical protein CKL_0548 527767 - 528126 + | hypothetical protein CKL_0549 528269 - 528676 + | hypothetical protein TERM 736 528774 - 528801 + T 87 -11.4 -2.62788 | opp_overlap 528774, overlap 528771 TTTTTTAGTTCAAAA CTGTCGCACTAA TTTT TTAGTGCAACAG TCCCTTATGATATGT TERM 737 528801 - 528774 - T 100 -13.6 -4.13767 | opp_overlap 528774 528771 TTTTTTAGTTCAAAA CTGTCGCACTAA TTTT TTAGTGCAACAG TCCCTTATGATATGT CKL_0550 530074 - 528869 - | transcriptional regulator TERM 738 530241 - 530280 + r 82 -5.2 -5.47218 | opp_overlap 530246, overlap 530246 GAAAAGATTGCGAAT TAAAATATTGTGGATTAT ACTA ATAACCCACAATATTTAC TTTTTTTAGCTAGAA TERM 739 530275 - 530246 - R 100 -11.7 -4.41494 | opp_overlap 530241 530246 GATTGCGAATTAAAA TATTGTGGATTAT ACTA ATAACCCACAATA TTTACTTTTTTTAGC TERM 740 530246 - 530275 + r 90 -9.5 -4.5187 | opp_overlap 530246, overlap 530241 GATTGCGAATTAAAA TATTGTGGATTAT ACTA ATAACCCACAATA TTTACTTTTTTTAGC CKL_0551 531359 - 530286 - | hypothetical protein CKL_0552 531693 - 531463 - | transcriptional regulator CKL_0553 532053 - 533057 + | hypothetical protein TERM 741 533146 - 533170 + F 100 -10.1 -5.23765 | opp_overlap 533146 TGTATATATCAGAAA TAGGCACTGTT AAG GACAGTGTCTA TTTTTATATTATTTA TERM 742 533170 - 533146 - f 72 -7.2 -4.04318 | opp_overlap 533146 TGTATATATCAGAAA TAGGCACTGT TAAGG ACAGTGTCTA TTTTTATATTATTTA CKL_0554 533391 - 533672 + | hypothetical protein TERM 743 533932 - 533950 + F 100 -7.4 -5.86976 | opp_overlap 533932 AAGTTTGCAATTAAA GCTGTGGA GTA TCCATGGC TTTTTTATTTTATAA CKL_0555 534029 - 535918 + | MutS-related protein CKL_0556 536041 - 536247 + | hypothetical protein TERM 744 536279 - 536311 + F 72 -5 -4.99043 | opp_overlap 536267, overlap 536267 TAAGAAAGATATGTA GCTTTCTATGAT AAAATAAAA ATCATAGGAGGC TTTTATTTATGGCGA CKL_0557 536320 - 536604 + | transposase TERM 745 537387 - 537420 + G 87 -10.3 -3.58343 | opp_overlap 537386 537393 AGAAAGTCTTAATAG TACATATCGCAGGCT TAAC AGCCAGCGAAGTGTA TTTCCAAGTGATACA TERM 746 537414 - 537393 - g 81 -10.1 -3.00923 | opp_overlap 537387, overlap 537386 TCTTAATAGTACATA TCGCAGGCT TAAC AGCCAGCGA AGTGTATTTCCAAGT CKL_0558 536701 - 537507 + | transposase topA1 540089 - 537735 - | TopA1 TERM 747 538640 - 538665 + g 85 -9.3 -4.08651 | overlap 538636 AGTCCTGAATCTCTT TTTTCTTAAAA GGAT TTTTAAGAAAA TTATTTAATTCCGAT CKL_0560 540393 - 541067 + | transcriptional regulator CKL_0561 541064 - 542125 + | two component sensor kinase CKL_0562 542431 - 543441 + | nucleoside-diphosphate-sugar epimerase TERM 748 543861 - 543835 - g 100 -12.5 -3.93061 | opp_overlap 543832 AGTCCAAAATGTAAA GGAAGGATATA ATCTG TATATCCTTCC AGATAATCTTTCCTA CKL_0563 543461 - 544555 + | Zn-dependent dehydrogenase CKL_0564 545374 - 544712 - | hydrolase TERM 749 545036 - 545058 + g 72 -7.1 -3.83864 | gap 1 CTCTGCCAATTGTAC TG-GTGTAGC TGTG GCTACACACA TTATTATGCCATTTT TERM 750 545172 - 545187 + g 70 -4.6 -4.80396 | TCAGAAATAATTTGT TCTGGG CAAT CCCTGA TTTTTAACTCTTTTC TERM 751 545263 - 545275 + g 100 -6.3 -5.8187 | CATTCAGGTTTTCTG GGAAT TTA ATTCC TTTTTTTGTTAAATA CKL_0565 545957 - 545805 - | transcriptional regulator CKL_0566 546071 - 546556 + | hypothetical protein CKL_0567 546929 - 547312 + | hypothetical protein TERM 752 547636 - 547600 - f 73 -5.4 -4.75518 | gap 1, opp_overlap 547603, overlap 547595 547603 TATAGAAAACTAAAA GAACAAAGTGAAGTTAA CACT CTAACT-CACTTTGTTT TCTTATAGTGATTTT TERM 753 547603 - 547633 + F 80 -6.4 -4.81814 | gap 1, opp_overlap 547600 547595 547603 AGAAAACTAAAAGAA CAAAGTGAAGTTA ACACTC TAACT-CACTTTG TTTTCTTATAGTGAT TERM 754 547633 - 547603 - f 78 -7.1 -4.44748 | gap 1, opp_overlap 547603, overlap 547600 547595 AGAAAACTAAAAGAA CAAAGTGAAGTTAA CACT CTAACT-CACTTTG TTTTCTTATAGTGAT CKL_0568 547892 - 548392 + | transposase CKL_0569 548440 - 548730 + | hypothetical protein TERM 755 548878 - 548855 - T 80 -6 -5.09173 | opp_overlap 548855 CAATAGGGCAAAAAA CCGTACCGAA TTTT TTGAGTACGG TTATAATTGTAAATT CKL_0570 550064 - 549009 - | FtsZ-related protein CKL_0571 550242 - 551078 + | hypothetical protein TERM 756 551120 - 551162 + T 100 -10 -4.9725 | opp_overlap 551124, overlap 551124 TTGTTTGAAGCTGTA AAAAGGTTGCTGACAGAAAG TAT TTTTCTGTCAACAACCTTAG TTTTTATATAAGACT TERM 757 551158 - 551124 - T 100 -16.7 -4.62471 | opp_overlap 551124 551120 TTGAAGCTGTAAAAA GGTTGCTGACAGAAA GTATT TTTCTGTCAACAACC TTAGTTTTTATATAA TERM 758 551124 - 551158 + T 100 -15.2 -3.91281 | opp_overlap 551124, overlap 551120 TTGAAGCTGTAAAAA GGTTGCTGACAGAAAG TAT TTTTCTGTCAACAACC TTAGTTTTTATATAA TERM 759 551204 - 551228 + T 70 -2.9 -5.2696 | opp_overlap 551210, overlap 551210 TTATTCGTTTAATCC TAACAACACAT AGA ATGTGTTTATA TTTTTTGCCTTTTAC TERM 760 551210 - 551222 + T 77 -6.3 -4.64992 | opp_overlap 551210, overlap 551204 GTTTAATCCTAACAA CACAT AGA ATGTG TTTATATTTTTTGCC CKL_0572 551743 - 551318 - | thioesterase cheB1 552990 - 551947 - | CheB1 CKL_0574 553372 - 553004 - | methyltransferase TERM 761 553113 - 553134 + g 74 -2.3 -5.52079 | opp_overlap 553115, overlap 553115 GGCTCGGTGATACCA TAGAATTTG TGAA CCAATTCTG TTTTTGTTTTAGTGT CKL_0575 553792 - 553595 - | hypothetical protein CKL_0576 554013 - 553906 - | chemotaxis transducer protein TERM 762 554521 - 554508 - R 80 -3.9 -5.66229 | overlap 554494 AGTAACAACAAAAAA TATGT TGTG ACATA GTACATTCAGAGTTT TERM 763 554531 - 554554 + r 87 -8.2 -4.72986 | GACATAGTACATTCA GAGTTTCAGA GGAA TCTGGAGCTC TTTTTAATGAAGATA TERM 764 554682 - 554662 - R 77 -5.4 -5.1166 | opp_overlap 554662 CAGTAAAATTAAAAA CCAGGGAT TATCC ATCACTGG TGTGGTGAAAAAGAC CKL_0577 555112 - 554942 - | hypothetical protein TERM 765 554970 - 554980 + g 90 -4 -6.07374 | TTTTTATCATGGATG TCTA ATT TAGA TTTTTTATTTTTTAT CKL_0578 555586 - 555164 - | hypothetical protein CKL_0579 556434 - 555610 - | transcriptional regulator TERM 766 556902 - 556886 - R 88 -5.3 -5.69793 | opp_overlap 556886 556889 AGAGGAAATAAAAAA TAATATT GTT AATATTA TTATCTTCAAAATAA TERM 767 557004 - 557057 + r 75 -8.5 -3.38966 | opp_overlap 557011, overlap 557006 557010 557013 557046 557047 TATTCATAAAGACTT TTTAAAATATAGCTAATGTATATAC AAGA GTATGTACATTAGCTATAATATATG TTAGTATATATTATA TERM 768 557006 - 557055 + r 100 -13.3 -3.25307 | opp_overlap 557011, overlap 557004 557010 557013 557046 557047 TTCATAAAGACTTTT TAAAATATAGCTAATGTATATAC AAGA GTATGTACATTAGCTATAATATA TGTTAGTATATATTA TERM 769 557010 - 557051 + r 100 -14.1 -3.14309 | opp_overlap 557011, overlap 557006 557004 557013 557046 557047 TAAAGACTTTTTAAA ATATAGCTAATGTATATAC AAGA GTATGTACATTAGCTATAA TATATGTTAGTATAT TERM 770 557050 - 557011 - R 100 -15.4 -4.11773 | opp_overlap 557010 557006 557004 557013 557046 557047 AAAGACTTTTTAAAA TATAGCTAATGTATATAC AAGA GTATGTACATTAGCTATA ATATATGTTAGTATA TERM 771 557013 - 557048 + r 100 -15.8 -2.76689 | opp_overlap 557011, overlap 557010 557006 557004 557046 557047 AGACTTTTTAAAATA TAGCTAATGTATATAC AAGA GTATGTACATTAGCTA TAATATATGTTAGTA TERM 772 557461 - 557486 + r 84 -4 -5.86465 | opp_overlap 557463, overlap 557463 TCTTTACACGTAAAG CAGGCATCCT TTATTC AGGATGTCTA TTTTTTTATATTGTT TERM 773 557463 - 557484 + r 76 -6.6 -4.53737 | opp_overlap 557463, overlap 557461 TTTACACGTAAAGCA GGCATCCT TTATTC AGGATGTC TATTTTTTTATATTG TERM 774 557692 - 557716 + r 74 -5.1 -5.03961 | opp_overlap 557692, overlap 557687 AAATAATACTGAAAA TAAGCACTT AGCATTG AGGTGCTTA TTTTATTATTTGATT CKL_0580 558379 - 558026 - | hypothetical protein TERM 775 558296 - 558257 - G 73 -8.1 -3.5394 | overlap 558258 AAATCCCTCTTGAAA TTCTACCTTTATATCAT ATGTTA ATGATATAAAGGTAGTC AACAGGTTCTTTGCT TERM 776 558295 - 558258 - G 86 -11.6 -2.72043 | overlap 558257 AATCCCTCTTGAAAT TCTACCTTTATATCAT ATGTTA ATGATATAAAGGTAGT CAACAGGTTCTTTGC TERM 777 558370 - 558409 + g 100 -16.4 -3.84246 | opp_overlap 558370 GTTTTGAACGCAAAA GCCCTGCCACTTGCCGGT GGAA ACCCACAGGTGGCGGGGC TTTGATGATTGGCAG TERM 778 558409 - 558370 - G 100 -14.2 -4.27316 | opp_overlap 558370 GTTTTGAACGCAAAA GCCCTGCCACTTGCCGGT GGAA ACCCACAGGTGGCGGGGC TTTGATGATTGGCAG CKL_0581 558707 - 559168 + | hypothetical protein CKL_0582 559237 - 559428 + | hypothetical protein CKL_0583 560240 - 562060 + | reverse transcriptase/maturase family protein CKL_0584 562285 - 562848 + | hypothetical protein TERM 779 563069 - 563045 - f 100 -12.2 -4.04295 | overlap 563047 TCAAGCAGAATTAAA CACCGGGGAT TATCC ATCCCCGGTA TAAAGAGAAATAAAC TERM 780 563067 - 563047 - f 100 -12.6 -3.60584 | overlap 563045 AAGCAGAATTAAACA CCGGGGAT TATCC ATCCCCGG TATAAAGAGAAATAA TERM 781 563908 - 563922 + G 72 -5.8 -4.4715 | opp_overlap 563892 563908 AAATTCAGGATATTA CTAAAT CTC ATTTAG TTTTATGGATTCAAC CKL_0585 563673 - 564011 + | hypothetical protein CKL_0586 564150 - 564587 + | hypothetical protein TERM 782 564637 - 564662 + F 88 -6.9 -5.1925 | overlap 564639 CAGTACAGAATTGAG TTTAGTGGTCT TAAC AGGCCACTATA TTTTTTGGCTTATAG TERM 783 564639 - 564660 + F 88 -9.5 -4.21792 | overlap 564637 GTACAGAATTGAGTT TAGTGGTCT TAAC AGGCCACTA TATTTTTTGGCTTAT TERM 784 564798 - 564759 - f 86 -9.5 -3.78235 | opp_overlap 564769, overlap 564764 564769 TTATAACCAATATAA TTTAATAAAAGCTCTGG TATTTG CCAGAGCTTTTATTGAG GTAATACTAATACAT TERM 785 564793 - 564764 - f 100 -13.8 -3.29549 | opp_overlap 564769, overlap 564759 564769 ACCAATATAATTTAA TAAAAGCTCTGG TATTTG CCAGAGCTTTTA TTGAGGTAATACTAA TERM 786 564788 - 564769 - f 100 -9.3 -4.73635 | opp_overlap 564769, overlap 564764 564759 TATAATTTAATAAAA GCTCTGG TATTTG CCAGAGC TTTTATTGAGGTAAT TERM 787 564769 - 564788 + F 100 -10 -4.66318 | opp_overlap 564764 564759 564769 TATAATTTAATAAAA GCTCTGGT ATTT GCCAGAGC TTTTATTGAGGTAAT TERM 788 564993 - 565018 + F 73 -8.3 -3.44377 | opp_overlap 564983 CAATATATGCTCCAA GCCTACCAGAG ATTT TTCTAGTAGGC TTCACTTTTATGTCT TERM 789 565221 - 565199 - f 88 -9.4 -4.14193 | AGAAGACCAGAGAAA TTATTTTATG AAG CATAAAATAA TAACAGCTCTGCAAG CKL_0587 565277 - 565534 + | hypothetical protein CKL_0588 565928 - 565626 - | transposase CKL_0589 566514 - 565897 - | transposase CKL_0590 567730 - 566804 - | transcriptional regulator CKL_0591 567986 - 569929 + | enoate reductase CKL_0592 569983 - 571185 + | transporter protein TERM 790 571210 - 571187 - T 78 -8.1 -4.00476 | TAAATGCATCATAAA GAGGAAGCC TTTCTT GGCTCCCCC AAATAAGTGGGAAAG TERM 791 571441 - 571471 + T 95 -11.4 -4.15577 | opp_overlap 571440 571441 571444, overlap 571444 CAAACAATGTAAAAT TAAGAGACTTTATG TTC TATGAAGTCTCTTA TTATTTAGTTATTCC TERM 792 571471 - 571441 - T 74 -8.5 -3.2256 | opp_overlap 571441 571444, overlap 571440 571444 CAAACAATGTAAAAT TAAGAGACTTTAT GTTCT ATGAAGTCTCTTA TTATTTAGTTATTCC TERM 793 571444 - 571468 + T 81 -8.7 -4.16787 | opp_overlap 571441 571440 571444, overlap 571441 ACAATGTAAAATTAA GAGACTTTATG TTC TATGAAGTCTC TTATTATTTAGTTAT TERM 794 571575 - 571585 + T 80 -4 -5.59962 | AAATATGTACCAGAT TTGT TTC ACAA TTTTTATTTATTTTG TERM 795 571638 - 571610 - T 73 -5.3 -4.63486 | opp_overlap 571612, overlap 571612 ATTTTGTTAACAAAA TATAAGAGCCCGA GGA CCAGACTCTTATT CACTAATATTCAATT TERM 796 571636 - 571612 - T 75 -7.9 -3.93367 | opp_overlap 571612, overlap 571610 TTTGTTAACAAAATA TAAGAGCCCGA GGA CCAGACTCTTA TTCACTAATATTCAA CKL_0593 571936 - 571634 - | hypothetical protein TERM 797 572044 - 572088 + r 100 -13.2 -5.75342 | gap 1, opp_overlap 572044 CATTAAAATAAAAAA TAATCCGAGAAAGGGAGATGT AAAA AAATCTCCCT-TCTTGGATTA TTTTTTTTGGACGAA TERM 798 572088 - 572044 - R 100 -11 -5.83211 | gap 1, opp_overlap 572044 CATTAAAATAAAAAA TAATCCGAGAAAGGGAGATGT AAAA AAATCTCCCT-TCTTGGATTA TTTTTTTTGGACGAA CKL_0594 572541 - 572146 - | transposase CKL_0595 573579 - 572596 - | transposase CKL_0596 573752 - 573465 - | transposase TERM 799 573772 - 573793 + r 73 -2.9 -5.43553 | overlap 573774 573776 CAATTCTACAACACT TACGGGTCT TTCT GGACCTGCA TTTTATTTTTTGCAT TERM 800 573860 - 573816 - R 70 -8 -2.96695 | gap 1, opp_overlap 573813 573812 573816, overlap 573813 TTTTGCATGAAATTA GGGCTGCTGCAC-CCTAAC TTTTATTT ATTAGTTGTGCAACAGCCC CTTTTCTCATACAAA TERM 801 573899 - 573880 - R 100 -12.2 -5.71712 | opp_overlap 573880 573867 TCTCATACAAAAAAA CCGTACTG AATT CAGTACGG TTGTATGTATCATTT TERM 802 573880 - 573899 + r 95 -12.2 -3.6733 | opp_overlap 573880, overlap 573867 TCTCATACAAAAAAA CCGTACTG AATT CAGTACGG TTGTATGTATCATTT TERM 803 574017 - 574044 + r 73 -8.5 -3.10409 | overlap 574012 574024 TTTAGAATTCCCTCT CTTAGACGCCT AAGGAC AGGCTTCTAAG TTCAGTAGCTTCATA TERM 804 574294 - 574339 + r 81 -10.2 -3.04183 | gap 1, opp_overlap 574297, overlap 574291 574297 ACGCCCCCAAGTTGA TAATTTAATACTACATATAGC AGTAA GCCA-ATGTAGTATTAAATTA TATCATTTAAGTTGT TERM 805 574297 - 574336 + r 71 -7.5 -3.65112 | gap 1, opp_overlap 574297, overlap 574294 574291 CCCCCAAGTTGATAA TTTAATACTACATATAGC AGTAA GCCA-ATGTAGTATTAAA TTATATCATTTAAGT TERM 806 574336 - 574297 - R 82 -9.7 -3.36492 | gap 1, opp_overlap 574294 574291 574297 CCCCCAAGTTGATAA TTTAATACTACATATAGC AGTAA GCCA-ATGTAGTATTAAA TTATATCATTTAAGT CKL_0597 576143 - 574755 - | transporter protein TERM 807 575345 - 575357 + g 74 -7.7 -3.9534 | opp_overlap 575338 TTAGAGCAGTAGCAT CTCCA CCT TGGAG TTTATACATATACAT CKL_0598 576522 - 576376 - | hypothetical protein TERM 808 576957 - 576975 + G 79 -8.2 -4.00476 | opp_overlap 576956, overlap 576971 ACTTATGAAAAAGGC TATAGGCG ATA TGCCTATA TTTATAGTAGATTTG TERM 809 577179 - 577160 - g 80 -5.8 -5.00234 | TAAAAAATAAAGAAA TTATACCT ACTA AGGTACAA AGTGAAAAAGAGTTA CKL_0599 576679 - 577617 + | phosphatase TERM 810 577649 - 577610 - g 70 -3.9 -5.09762 | opp_overlap 577612 577613, overlap 577612 577613 ATTGGAATATAAAAA TAGCATAATAATAAATA GTATAG TATTTATTATTATGGTT TTTGCAGCGGTGAAT TERM 811 577612 - 577647 + G 76 -6.5 -4.57569 | opp_overlap 577612 577610 577613, overlap 577613 TGGAATATAAAAATA GCATAATAATAAATA GTATAG TATTTATTATTATGG TTTTTGCAGCGGTGA TERM 812 577647 - 577612 - g 70 -6.5 -4.17211 | opp_overlap 577612 577613, overlap 577610 577613 TGGAATATAAAAATA GCATAATAATAAATA GTATAG TATTTATTATTATGG TTTTTGCAGCGGTGA TERM 813 577613 - 577646 + G 82 -10 -3.3422 | opp_overlap 577613 577612 577610, overlap 577612 GGAATATAAAAATAG CATAATAATAAATA GTATAG TATTTATTATTATG GTTTTTGCAGCGGTG TERM 814 577646 - 577613 - g 81 -10 -3.09242 | opp_overlap 577612 577613, overlap 577612 577610 GGAATATAAAAATAG CATAATAATAAATA GTATAG TATTTATTATTATG GTTTTTGCAGCGGTG TERM 815 577826 - 577814 - g 82 -2.7 -5.96894 | opp_overlap 577808 ATTGAAAGAAAAAAA TGTAA AGG CTACA TTTTTCGTTATAGGA CKL_0600 577596 - 578384 + | polysaccharide deacetylase TERM 816 578435 - 578381 - T 72 -7 -4.02468 | gap 2, opp_overlap 578382 578387 578424, overlap 578382 578387 AAAAATACTTACAAA TTAAAAGTCTAAGGCAAG--ATATTA AATTA TAATATGTCTTGCCTTAAACTTTTAT ATTATCAATGTTTAA TERM 817 578434 - 578382 - T 84 -10.5 -2.99854 | gap 2, opp_overlap 578382 578387 578424, overlap 578381 578387 AAAATACTTACAAAT TAAAAGTCTAAGGCAAG--ATATTA AATTA TAATATGTCTTGCCTTAAACTTTTA TATTATCAATGTTTA TERM 818 578382 - 578434 + T 86 -10.3 -3.29251 | opp_overlap 578381 578382 578387, overlap 578387 578424 AAAATACTTACAAAT TAAAAGTCTAAGGCAAGATAT TAAATTATAAT ATGTCTTGCCTTAAACTTTTA TATTATCAATGTTTA TERM 819 578429 - 578387 - T 72 -6 -4.62475 | gap 2, opp_overlap 578387 578382 578424, overlap 578382 578381 ACTTACAAATTAAAA GTCTAAGGCAAG--ATATTA AATTA TAATATGTCTTGCCTTAAAC TTTTATATTATCAAT TERM 820 578387 - 578429 + T 75 -5.8 -4.74285 | opp_overlap 578382 578381 578387, overlap 578382 578424 ACTTACAAATTAAAA GTCTAAGGCAAGATAT TAAATTATAAT ATGTCTTGCCTTAAAC TTTTATATTATCAAT CKL_0601 580053 - 578440 - | hypothetical protein TERM 821 579353 - 579339 - G 72 -5.7 -4.44046 | CCCAGCCTAAACAAA TGGAG TCCTT CTCCA TGGAGCTAAATACTT TERM 822 581749 - 581735 - g 79 -2.8 -5.77677 | overlap 581728 CAAAATAATAAAAAA GGTTTT ATA AAAGCC ATGTGGTGTGGGGAT proS 580475 - 581905 + | prolyl-tRNA synthetase TERM 823 581998 - 581961 - f 70 -8.7 -2.66638 | opp_overlap 581966 581997, overlap 581966 581970 GCAAATAGTTATAAT GAAAAGAAATACTGTGA ATTT TCATAGTATTTCTTTTT TATATTAATAAATAA TERM 824 581993 - 581966 - f 83 -8.6 -4.50058 | opp_overlap 581966, overlap 581961 581970 TAGTTATAATGAAAA GAAATACTGTGA ATTT TCATAGTATTTC TTTTTTATATTAATA TERM 825 581966 - 581993 + F 100 -10.8 -5.49569 | opp_overlap 581961 581966 581970 TAGTTATAATGAAAA GAAATACTGTGA ATTT TCATAGTATTTC TTTTTTATATTAATA TERM 826 582759 - 582746 - g 74 -5.3 -4.8048 | CGGGTACAGGAAAAA CTTTG CTTG CAAAG GCGGTAGCAGGAGAG ftsH2 582112 - 583941 + | FtsH2 CKL_0604 583996 - 586125 + | ATP-dependent DNA helicase TERM 827 586131 - 586168 + F 78 -8.6 -3.79419 | overlap 586129 GATTAATTAAAGTTT CTAAGCTTCAGGTT TTGTTAAATT ATCCTGAAGCTTAG TGTTTTATAAAGGAG hydE 586195 - 587238 + | biotin synthase TERM 828 587530 - 587568 + G 80 -5.5 -5.31275 | gap 1, opp_overlap 587533 587534, overlap 587534 GTACACAGCTGTGCA TAATGTGCAGTATAGG TCTGTGTT CCTTTACTGCAC-TTA TTTTTTATCCTGAGG TERM 829 587534 - 587565 + G 93 -8.8 -4.74611 | opp_overlap 587533 587534, overlap 587530 ACAGCTGTGCATAAT GTGCAGTATAGG TCTGTGTT CCTTTACTGCAC TTATTTTTTATCCTG CKL_0606 587399 - 587581 + | hypothetical protein lysC1 587748 - 588947 + | LysC1 lysA 588993 - 590288 + | hypothetical protein TERM 830 594370 - 594357 - g 86 -3.8 -5.88565 | TGTATAATAAAAAAA GGCA GCTTTT TGCC ATAGGATATGATGTG ndvB 590342 - 599002 + | NdvB TERM 831 599008 - 599040 + F 80 -8 -4.20531 | gap 1, opp_overlap 598998 599008 599003 599013, overlap 599013 AAATATATAATATAA TTATA-CCTCCTAAA TTCA TTTGGGAGGTTATAA TTTTAAATAAGTCTA TERM 832 599013 - 599034 + F 84 -9.5 -3.6943 | opp_overlap 599008 599003 599013, overlap 599008 TATAATATAATTATA CCTCCTAAA TTCA TTTGGGAGG TTATAATTTTAAATA TERM 833 599193 - 599217 + F 81 -7.2 -4.77157 | opp_overlap 599192 599194, overlap 599194 TACAGTGCCAGTAAT ACCCTATGAT TGTGT ATCATAGGGA TTTTTCATACATTAG TERM 834 599216 - 599194 - f 88 -10.7 -3.14229 | opp_overlap 599193 599194, overlap 599192 ACAGTGCCAGTAATA CCCTATGAT TGTGT ATCATAGGG ATTTTTCATACATTA TERM 835 599194 - 599216 + F 90 -10.7 -3.45571 | opp_overlap 599194 599192, overlap 599193 ACAGTGCCAGTAATA CCCTATGAT TGTGT ATCATAGGG ATTTTTCATACATTA trpS 599261 - 600286 + | tryptophanyl-tRNA synthetase CKL_0611 600505 - 600747 + | hypothetical protein CKL_0612 600738 - 601469 + | protein kinase CKL_0613 602991 - 601603 - | oxidoreductase TERM 836 602647 - 602671 + g 71 -2.9 -5.30686 | opp_overlap 602649, overlap 602649 602650 TGAAGGACTAATAAG TAGTACAAAGG GAA TCTTTGTATCA TTTTTTATACCTATT CKL_0614 603799 - 604320 + | hypothetical protein CKL_0615 604559 - 605218 + | hypothetical protein CKL_0616 605285 - 606541 + | hypothetical protein TERM 837 606604 - 606564 - T 70 -7.7 -3.41053 | opp_overlap 606572, overlap 606572 TTAAATGATGCATAA TTTTAGAAGCTGCCAATAA AGG TTATCGGCAGCTTTTTATA TAATTTATGCAATTG TERM 838 606572 - 606596 + T 100 -11.5 -5.06585 | opp_overlap 606572 606564 TGCATAATTTTAGAA GCTGCCAATAA AGG TTATCGGCAGC TTTTTATATAATTTA TERM 839 606596 - 606572 - T 100 -13.7 -3.38291 | opp_overlap 606572, overlap 606564 TGCATAATTTTAGAA GCTGCCAATAA AGG TTATCGGCAGC TTTTTATATAATTTA CKL_0617 607475 - 606609 - | signal transduction protein TERM 840 606975 - 606986 + g 71 -3 -5.28176 | TATAATGTCTCCATT TATG TGAC CATA TTTTTTATCGATGAG CKL_0618 607822 - 607472 - | hypothetical protein TERM 841 608043 - 608081 + r 100 -8.4 -5.4756 | gap 1, opp_overlap 608043 TTATTTTATTAAAAA GGTCATG-ATTAAAGGT GGTATA ACCTTTATTTCATGACC TTTTTTCTTACCATT TERM 842 608081 - 608043 - R 90 -8.4 -4.7373 | gap 1, opp_overlap 608043 TTATTTTATTAAAAA GGTCATG-ATTAAAGGT GGTATA ACCTTTATTTCATGACC TTTTTTCTTACCATT CKL_0619 608894 - 608097 - | ABC transporter ATPase TERM 843 608717 - 608740 + gr 78 -9 -3.17075 | gap 1 ATATTATAGAACCTT TAT-CGGCACT TAA AGTGCCGCATA TTAAATTGAGCAGAG CKL_0620 609759 - 608869 - | ABC transporter permease CKL_0621 610778 - 609759 - | extracellular substrate-binding protein TERM 844 610068 - 610095 + g 71 -8.6 -2.84171 | opp_overlap 610067 610064, overlap 610065 TATAGATGAAACTAC TGCATTATCTGT AGGT ACATATAATGCA TCAATTTTTCCAACT TERM 845 610233 - 610250 + g 71 -8.5 -2.85019 | TGAGTTGGTTTCACT GGTATTG TATA CAATACC TAACTTTTTAGCATT TERM 846 610877 - 610860 - R 100 -5.6 -6.4275 | opp_overlap 610860 CAAAAATAAAAAAAA GTTCTG TGTCAG CAGAAC TTTTAGATAACAGAA TERM 847 610860 - 610877 + r 70 -6.3 -4.18018 | opp_overlap 610860 CAAAAATAAAAAAAA GTTCTGT GTCA GCAGAAC TTTTAGATAACAGAA CKL_0622 611551 - 611135 - | hypothetical protein CKL_0623 612160 - 611585 - | methyltransferase CKL_0624 612343 - 613179 + | nucleotide-binding protein CKL_0625 613176 - 613535 + | hypothetical protein CKL_0626 613561 - 614391 + | ATP-binding protein CKL_0627 614382 - 615281 + | ATP-binding protein CKL_0628 615256 - 615615 + | hypothetical protein CKL_0629 615654 - 616010 + | hypothetical protein fur2 616037 - 616462 + | hypothetical protein TERM 848 616811 - 616832 + G 86 -9.5 -4.05446 | opp_overlap 616811 616799, overlap 616830 GAAGTGAATTATGAA CAGGACAGA CTTC TTTGTCCTG TTTGTGGTTCACAAA CKL_0631 616466 - 616912 + | DNA-binding protein CKL_0632 616937 - 617320 + | NifU-like protein CKL_0633 617473 - 619161 + | Acyl-CoA dehydrogenase, short-chain specific TERM 849 619176 - 619199 + F 100 -12.6 -4.39166 | opp_overlap 619181 GAATTTGTAATTTTT TAAGAGGTGA TTAT TCACCTCTTA TTTTAGTATGTAAAA TERM 850 619281 - 619271 - g 78 -6.8 -4.43221 | AAAGAGGTGATAAAA TGGC AAG GCCA AGAAAATGGAGGAAA CKL_0634 619270 - 619638 + | DNA-binding protein CKL_0635 619760 - 620107 + | hypothetical protein TERM 851 620220 - 620169 - f 100 -15.6 -3.61356 | opp_overlap 620177 620185, overlap 620177 620185 AGTATGTATTTTAAA TTTTTAAAGTATTAAAGACTCTGA TGAC TCAGGGCCTTTAATACTTTAAGAA ACATTAGGAATATGT TERM 852 620177 - 620212 + F 100 -12.8 -3.54459 | opp_overlap 620169 620177 620185, overlap 620185 TTTTAAATTTTTAAA GTATTAAAGACTCTGA TGAC TCAGGGCCTTTAATAC TTTAAGAAACATTAG TERM 853 620212 - 620177 - f 100 -12.8 -3.63968 | opp_overlap 620177 620185, overlap 620169 620185 TTTTAAATTTTTAAA GTATTAAAGACTCTGA TGAC TCAGGGCCTTTAATAC TTTAAGAAACATTAG TERM 854 620584 - 620603 + G 80 -7.9 -4.1899 | opp_overlap 620583 AGTAAAAGTAGAAGT TCAGCAG AGGAAG CTGCTGA TTTTACATCCAGTAA CKL_0636 620521 - 621333 + | hypothetical protein panB 621326 - 622168 + | hypothetical protein panC 622170 - 623048 + | hypothetical protein TERM 855 623883 - 623873 - g 84 -5.4 -5.46657 | opp_overlap 623873 TATGCTAATAAAAAA TCTG CTG CAGA ATTTTTGAAAGATTA CKL_0639 623258 - 624103 + | phosphatase TERM 856 624173 - 624125 - T 70 -8.8 -2.70298 | gap 1, opp_overlap 624126 624133, overlap 624133 TGTGTGAATTATAAT TTTAAAAAGTCTTTAATAAAT TAGAGAAC ATTTATTAAAGAC-TTTTAAA TTATCTTAAGGTTAT TERM 857 624126 - 624173 + T 88 -10.4 -3.6947 | opp_overlap 624125 624133, overlap 624133 GTGTGAATTATAATT TTAAAAAGTCTTTAATAAAT TAGAGAAC ATTTATTAAAGACTTTTAAA TTATCTTAAGGTTAT TERM 858 624133 - 624166 + T 83 -8.5 -4.35874 | opp_overlap 624125 624133, overlap 624126 TTATAATTTTAAAAA GTCTTTAATAAAT TAGAGAAC ATTTATTAAAGAC TTTTAAATTATCTTA TERM 859 624166 - 624133 - T 90 -8.5 -4.6902 | opp_overlap 624133 624126, overlap 624125 TTATAATTTTAAAAA GTCTTTAATAAAT TAGAGAAC ATTTATTAAAGAC TTTTAAATTATCTTA spoVR 625439 - 624174 - | hypothetical protein CKL_0641 626656 - 625445 - | hypothetical protein CKL_0642 628583 - 626661 - | serine kinase TERM 860 629037 - 629008 - R 83 -6.6 -4.98857 | opp_overlap 629013, overlap 629010 ATTTAAGGATAAAAA TATAACTGGAAA TTATAT TTTCCAGTTATG TGAAAAATCAAATAA TERM 861 629035 - 629010 - R 86 -9.2 -4.11322 | opp_overlap 629013, overlap 629008 TTAAGGATAAAAATA TAACTGGAAA TTATAT TTTCCAGTTA TGTGAAAAATCAAAT CKL_0643 629541 - 629059 - | EmrR-related transcriptional regulator CKL_0644 631102 - 629513 - | EmrB-related transporter protein TERM 862 629672 - 629627 - GR 77 -8.5 -3.67622 | opp_overlap 629629 629632, overlap 629623 629654 TATGGCTAAAACCAA TACAATAGAGATTATGGCC AGGGAATA GGCCATAGCGTCTATTGTA GCTTGGCCTTGAACC TERM 863 630657 - 630670 + gr 78 -9.5 -3.02511 | GGTCCTATGGAAGGT GCCGC CATA GCGGC TATTCCCCAGATGCC CKL_0645 631770 - 631117 - | EmrA-related transporter protein CKL_0646 632775 - 631795 - | EmrA-related transporter protein TERM 864 632971 - 632947 - R 95 -8.8 -5.09762 | overlap 632930 TTTGAATAAATAAAA TAATCTATTC AAAAG GAATAGATTA GGATATAAATCATTT CKL_0647 634325 - 633090 - | amino acid permease TERM 865 633697 - 633674 - G 73 -8.2 -3.54408 | GTTTATTGAAAGTAA GTACAAAAGG ACTT CCTATTGTAC CAAGACTGTTCCACG TERM 866 633924 - 633912 - G 71 -5.5 -4.66163 | ACCTTTAGGTAAAAA GCCTC CAT GAGAC CATAAGTTTGAAATA CKL_0648 634502 - 634365 - | hypothetical protein TERM 867 634553 - 634563 + H 71 -4 -5.09762 | opp_overlap 634553 ATTAATTCAAAATTA TTCA GCT TGAA TTTTATTTGTTCAAA TERM 868 635323 - 635364 + H 95 -7.6 -5.47431 | opp_overlap 635321 635323 TAAAAATTAGATATA GGTAATAGAAAAATTATT TCAAAT GAGAGTTTTTCTATTACC TTTTTTGTATATTAA TERM 869 635415 - 635392 - H 70 -8.4 -2.7339 | overlap 635391 TAAAAATTAATTAAG TGTATTTTTA CAGG TAAAAATACA GGAGGTATATTATAT carA1 635431 - 636480 + | carbamoyl phosphate synthase small subunit carB1 636541 - 639747 + | carbamoyl phosphate synthase large subunit amaA 639789 - 640985 + | AmaA TERM 870 641012 - 640987 - T 100 -12.1 -4.82998 | CCAAATTAAAATAAA TAGGATGTTAT AATT ATAACATCCTA AAGAATAGAAACTTA CKL_0652 642242 - 641025 - | two component sensor kinase CKL_0653 642923 - 642246 - | transcriptional regulator TERM 871 642413 - 642423 + g 70 -4 -5.06414 | ATATCTGATCTTTGG TCAA TAC TTGA TTTTTATTACGAGCC CKL_0654 643196 - 644164 + | glycosyltransferase TERM 872 644229 - 644257 + G 80 -5.3 -5.14985 | opp_overlap 644238, overlap 644230 ATAAGTCGTTTTTCG GCTACAGGAGTAT TAA ATACTCTGGTAGA TTTTTGTGTATTTAC TERM 873 644230 - 644256 + G 77 -8.8 -3.67364 | opp_overlap 644238, overlap 644229 TAAGTCGTTTTTCGG CTACAGGAGTAT TAA ATACTCTGGTAG ATTTTTGTGTATTTA CKL_0655 644148 - 644579 + | hypothetical protein TERM 874 645518 - 645502 - g 79 -6.6 -4.67943 | GGCTAATAGACAAAA GACTGT AGAGG ACAGTC AAAATGGAAATATGG CKL_0656 644597 - 646822 + | glycosyltransferase TERM 875 646837 - 646872 + F 70 -6.3 -4.0827 | overlap 646838 ATATTTCAGAGTGGT TTTCAAGTAGGCTTT TATTTT AAGGTCTACTTGAAC TTTATGTAAATATAT TERM 876 646838 - 646871 + F 81 -9.8 -3.04239 | overlap 646837 TATTTCAGAGTGGTT TTCAAGTAGGCTTT TATTTT AAGGTCTACTTGAA CTTTATGTAAATATA hemA 646993 - 648240 + | glutamyl-tRNA reductase hemL 648264 - 649532 + | glutamate-1-semialdehyde aminotransferase TERM 877 649593 - 649632 + F 81 -9.8 -2.99449 | gap 1, opp_overlap 649596 649601, overlap 649601 649628 TTTATATACATTGAT TAATAAAATAAGGTTAAAA AAA TTTTAGCCTTATTTT-TTA TGTAATTATATAAAA TERM 878 649625 - 649601 - f 81 -7.3 -4.72497 | opp_overlap 649593 649601, overlap 649596 CATTGATTAATAAAA TAAGGTTAAAA AAA TTTTAGCCTTA TTTTTTATGTAATTA TERM 879 649601 - 649625 + F 100 -9.5 -5.42131 | opp_overlap 649601 649596, overlap 649593 CATTGATTAATAAAA TAAGGTTAAAA AAA TTTTAGCCTTA TTTTTTATGTAATTA CKL_0659 649710 - 650165 + | transcriptional regulator ald 650181 - 651296 + | hypothetical protein TERM 880 651412 - 651381 - f 100 -11.8 -5.14563 | opp_overlap 651385 651409, overlap 651409 CTTTTTAGTAAAAAA TAAATCTCCCACTC GAAA GAGTGAAAGATTTA CGGTAAAATTAATAT CKL_0661 651428 - 652198 + | transposase CKL_0662 652214 - 652417 + | transposase TERM 881 652458 - 652444 - T 82 -2.8 -5.98781 | opp_overlap 652444 652457 TAGAATTAAAAAAAA CCTTAT CAG AAAAGG CTTATTAAAGTAGGC TERM 882 652540 - 652584 + T 83 -7.8 -4.71426 | opp_overlap 652541 652543, overlap 652541 ATAAAGTACTAAAAA AGCGCTGCCGCGTTAGCTTA TTTTT TATGCTAATGCGACAGCCCC TTTTATTAATAAAAC TERM 883 652541 - 652583 + T 93 -11.3 -3.42374 | opp_overlap 652541 652543, overlap 652540 TAAAGTACTAAAAAA GCGCTGCCGCGTTAGCTTA TTTTT TATGCTAATGCGACAGCCC CTTTTATTAATAAAA TERM 884 652583 - 652541 - T 100 -11.3 -5.243 | opp_overlap 652540 652541, overlap 652543 TAAAGTACTAAAAAA GCGCTGCCGCGTTAGCTTA TTTTT TATGCTAATGCGACAGCCC CTTTTATTAATAAAA TERM 885 652581 - 652543 - T 93 -12.5 -2.82145 | opp_overlap 652541 652540, overlap 652541 AAGTACTAAAAAAGC GCTGCCGCGTTAGCTTA TTTTT TATGCTAATGCGACAGC CCCTTTTATTAATAA CKL_0663 654215 - 652590 - | hypothetical protein TERM 886 652618 - 652628 + g 84 -5.4 -5.4833 | opp_overlap 652612 ATATCAAAAGATTCA GGAT TAA ATCC TTTTTTCTTAAGTAC TERM 887 652934 - 652944 + g 70 -4 -5.1166 | opp_overlap 652934 GTGCACAGGAAAAGG CAAA TAT TTTG TTTTTACTTTTAATA TERM 888 653433 - 653423 - G 74 -5.4 -4.92314 | ATGAATTTATAAAAA TAGC TGG GCTA AAAATATAAAAAGCA CKL_0664 654386 - 655234 + | hypothetical protein TERM 889 655432 - 655415 - f 86 -9.9 -3.61356 | opp_overlap 655415 ATTATGTATGTTAAA TCTGAGG TTTT CCTCAGA TTTTTTAGTGCTGTA TERM 890 655415 - 655432 + F 100 -9.9 -5.20216 | opp_overlap 655415 ATTATGTATGTTAAA TCTGAGG TTTT CCTCAGA TTTTTTAGTGCTGTA TERM 891 655832 - 655822 - g 77 -4 -5.43329 | AAAAACAAAATAAAA TCTA GAG TAGA GGAATTATTAAAATT CKL_0665 655480 - 656436 + | ABC transporter ATPase TERM 892 656715 - 656699 - g 82 -8.7 -4.13014 | overlap 656703 CTTATAGTTGGAAAA GCCATAG GTA CTACGGC AGCCATAGTTCCACT CKL_0666 656438 - 657094 + | ABC transporter permease CKL_0667 657944 - 657183 - | hydrolase TERM 893 659122 - 659104 - g 86 -3.2 -6.17268 | opp_overlap 659108 GTAGAAGAAAAAAAA CAGATAAA GGT TTTATATG TATGAGATGTTCTGA CKL_0668 658275 - 659471 + | hypothetical protein polA 659557 - 662199 + | DNA polymerase I coaE 662223 - 662822 + | dephospho-CoA kinase CKL_0671 662867 - 663445 + | lytic murein transglycosylase TERM 894 663667 - 663681 + F 100 -8.6 -6.02914 | CAAAGAGAGTACTGA GAAGCA GAT TGCTTC TTTTTTTTATATCAC CKL_0673 664119 - 664292 + | hypothetical protein CKL_0674 664461 - 664976 + | hypothetical protein TERM 895 665026 - 665005 - f 70 -3 -5.37345 | opp_overlap 665000 665005 TTTAAGGACAAAAAA GAATATCC TTGAAT GGGTATTC TTTTGTTATTTATTA TERM 896 665005 - 665026 + F 77 -5.2 -5.08731 | opp_overlap 665005, overlap 665000 TTTAAGGACAAAAAA GAATATCC TTGAAT GGGTATTC TTTTGTTATTTATTA CKL_0675 665120 - 665995 + | dehydrogenase TERM 897 665993 - 666041 + T 100 -12.7 -2.6155 | opp_overlap 665999, overlap 665999 666031 CAATTTATAGGGGGA TAAAAAGTTAAGGGTTAAGGGAA AAT TATCCATAACCCTTAACTTATTA GTTAGTATTAGAAGC TERM 898 665999 - 666035 + T 95 -11.7 -3.85518 | opp_overlap 665999, overlap 665993 666031 ATAGGGGGATAAAAA GTTAAGGGTTAAGGGAA AAT TATCCATAACCCTTAAC TTATTAGTTAGTATT TERM 899 666035 - 665999 - T 100 -9.6 -4.84761 | opp_overlap 665993 665999 666031 ATAGGGGGATAAAAA GTTAAGGGTTAAGG GAAAATTAT CCATAACCCTTAAC TTATTAGTTAGTATT cotJC 666621 - 666049 - | CotJC cotJB 666888 - 666634 - | CotJB CKL_0678 667112 - 666891 - | hypothetical protein TERM 900 667411 - 667438 + H 100 -11.6 -6.02914 | opp_overlap 667418 AAGTAACTCATATGG CTTCAAATAAAA TATA TTTTATTTGAAG TTTTTTTTGTATAAA CKL_0679 667495 - 667980 + | hypothetical protein TERM 901 668011 - 668045 + T 100 -10.3 -5.21236 | opp_overlap 668011 668015 AAAGTGGTGATTTAA TTGAGAGTTATGGAA ATATA TTTCATAACTCTTAA TTTTTATTGTAGGTT CKL_0680 668834 - 668049 - | hypothetical protein TERM 902 668633 - 668655 + g 81 -4.3 -5.32882 | TATAAATATTATTAT TATTTTCAT CTTTT ATGGAAATA TTTTTTATACTACTA CKL_0681 669145 - 668864 - | hypothetical protein CKL_0682 669965 - 669393 - | hypothetical protein TERM 903 669869 - 669879 + g 75 -2.6 -5.59502 | ATAGCTGTTTTTCAT TAAA TTT TTTA TTTTTTAATTTTTTG CKL_0683 670129 - 670821 + | hypothetical protein CKL_0684 670914 - 671267 + | hypothetical protein CKL_0685 671512 - 672117 + | hypothetical protein TERM 904 672225 - 672185 - T 95 -11.6 -3.89572 | opp_overlap 672184 672183 ATTGAACTATAAGAA TATTGTAGGAATATAT AAGAACAAA ATATATTCCTACAATA ACTGTTTAGCATAAA CKL_0686 673586 - 672231 - | two component sensor kinase TERM 905 673732 - 673707 - R 76 -8.4 -3.58428 | opp_overlap 673707, overlap 673703 TTTAAATATAAGCAA GCAATCATCA TTCTAT TGATGACTGC TTTTAATTGGATACC TERM 906 673707 - 673732 + r 72 -6.2 -4.43477 | opp_overlap 673707 673703 TTTAAATATAAGCAA GCAATCATCA TTCTAT TGATGACTGC TTTTAATTGGATACC CKL_0687 674675 - 673719 - | two component sensor kinase TERM 907 674624 - 674614 - G 70 -4 -5.1101 | TTATTATCTAAAAAA TATG GCA CATA AGTAACTAAACATAA CKL_0688 675454 - 674768 - | transcriptional regulator TERM 908 675666 - 675635 - R 82 -8.1 -4.60797 | overlap 675630 GGTTTATAGATAAAA CTAGAGAGAAGTT TTTAAT AACTCCCCCCTAG TTTTTATGTGTTATA CKL_0689 676137 - 675724 - | hypothetical protein TERM 909 675906 - 675928 + g 72 -5 -4.84642 | overlap 675900 TTGTTATTTTATTAT TATAATATAG ATT CAATATTATA TTTTCTTGGTTTGAA TERM 910 676340 - 676306 - R 86 -6.5 -5.252 | opp_overlap 676308 676309, overlap 676287 676309 TATTTGTATAAAAAA TAAGCTGTTGCATAA ATTAA TTATGCAGCAGCCTT TTGATAGTTTAAGAA TERM 911 676308 - 676338 + r 86 -9.1 -4.39386 | opp_overlap 676287 676306 676309, overlap 676309 TTTGTATAAAAAATA AGCTGTTGCATAA ATTAA TTATGCAGCAGCC TTTTGATAGTTTAAG TERM 912 676309 - 676337 + r 100 -12.6 -3.22909 | opp_overlap 676309 676306, overlap 676308 TTGTATAAAAAATAA GCTGTTGCATAA ATTAA TTATGCAGCAGC CTTTTGATAGTTTAA TERM 913 676337 - 676309 - R 100 -10.4 -4.72201 | opp_overlap 676308 676309, overlap 676306 TTGTATAAAAAATAA GCTGTTGCATAA ATTAA TTATGCAGCAGC CTTTTGATAGTTTAA CKL_0690 676973 - 676437 - | hypothetical protein CKL_0691 678030 - 677140 - | transporter protein TERM 914 677818 - 677836 + g 77 -7.5 -4.01564 | opp_overlap 677820 TACAAAACCGCGAAC GACATCT TCTAT AGATGTC TTTATGACTATTTTA TERM 915 677880 - 677861 - G 70 -7.2 -3.66769 | overlap 677857 ATTTTAAAAAATATA GCTGAAAT TAAT ATTCCAGC ACATAGAAATCTTAT TERM 916 678125 - 678137 + H 70 -4.9 -4.72486 | opp_overlap 678133, overlap 678133 CATTTATAGTTTATG TCAAA TAA TTTGA TTTTTCAAATTTATC TERM 917 679106 - 679126 + G 95 -10.5 -4.38774 | CTAAACATAATGTCA TAGCTTCTG ATT CAGAGGCTA TTTTAGTGTCATGTT CKL_0692 678331 - 679791 + | dipeptidase TERM 918 679834 - 679864 + T 74 -6.9 -4.27465 | opp_overlap 679837, overlap 679832 679835 GATATTATATTTATG ATATCCTCCAGCT TTTTT AACTGGAGGATAA TTGTTTTGAATTCTA TERM 919 679835 - 679863 + T 86 -10.4 -3.15395 | opp_overlap 679837, overlap 679834 679832 ATATTATATTTATGA TATCCTCCAGCT TTTTT AACTGGAGGATA ATTGTTTTGAATTCT TERM 920 679861 - 679837 - T 86 -10.8 -2.82193 | opp_overlap 679835 679834 679832 ATTATATTTATGATA TCCTCCAGCT TTTTT AACTGGAGGA TAATTGTTTTGAATT CKL_0693 680255 - 679887 - | hypothetical protein CKL_0694 681091 - 680255 - | hypothetical protein CKL_0695 681217 - 681648 + | hypothetical protein TERM 921 681624 - 681634 + T 70 -6.8 -3.98214 | TATGCTATTTATATT GTCC GCG GGAC TTTCTGCTAAATAAT TERM 922 681772 - 681730 - T 70 -3 -5.1925 | overlap 681731 TGATAATGCAAAAAA TTATAATACAACATACTT GATTAAA ATATATGTTGTATTATAG AGGTAAATTTATTAT CKL_0696 683094 - 681784 - | cysteine desulfurase-related enzyme TERM 923 683123 - 683158 + H 100 -13.7 -4.31164 | opp_overlap 683125 683128 CTGTTAGCTTTATTA TAGAAGTAAAAGTAT AATGGC ATACTTTTACTTCTA TTTATATTATGTAGC TERM 924 683156 - 683125 - H 100 -12.6 -2.79183 | opp_overlap 683123, overlap 683128 GTTAGCTTTATTATA GAAGTAAAAGTATA ATGG CATACTTTTACTTC TATTTATATTATGTA TERM 925 683153 - 683128 - H 76 -8.5 -3.54653 | opp_overlap 683123, overlap 683125 AGCTTTATTATAGAA GTAAAAGTATA ATGG CATACTTTTAC TTCTATTTATATTAT CKL_0697 683370 - 684023 + | dihydroxyacetone kinase CKL_0698 684059 - 684451 + | hypothetical protein TERM 926 684526 - 684562 + T 100 -13.3 -5.69793 | opp_overlap 684526 684527 684530, overlap 684528 ATAATACTGTTTAAA TGGATTCCTATGATAAT ATT ATTGTCATAGGAATCTG TTTTTTGTTTGATAT TERM 927 684561 - 684527 - T 78 -10.2 -2.74248 | opp_overlap 684526 684528, overlap 684526 684530 TAATACTGTTTAAAT GGATTCCTATGATAAT ATT ATTGTCATAGGAATCT GTTTTTTGTTTGATA TERM 928 684528 - 684560 + T 100 -15.9 -4.47052 | opp_overlap 684527 684526 684530, overlap 684526 AATACTGTTTAAATG GATTCCTATGATAAT ATT ATTGTCATAGGAATC TGTTTTTTGTTTGAT TERM 929 684558 - 684530 - T 81 -10.5 -2.64472 | opp_overlap 684528 684526, overlap 684527 684526 TACTGTTTAAATGGA TTCCTATGATAAT ATT ATTGTCATAGGAA TCTGTTTTTTGTTTG CKL_0699 686235 - 684604 - | aspartate aminotransferase sdhB 686398 - 687081 + | hypothetical protein sdhA 687085 - 687963 + | hypothetical protein TERM 930 687984 - 687966 - T 77 -6.2 -4.74989 | overlap 687976 AAATAATATATAAAA TTTAAAAA CTG TTTTTAAA AATGAAAAACCACCT TERM 931 688016 - 687994 - T 89 -7.8 -5.18355 | opp_overlap 687998 TTTAAAAATGAAAAA CCACCTTT TAAAAAT AAAGGTGG TTAAAACATTCGTTC cspA 688273 - 688070 - | CspA CKL_0703 688494 - 689675 + | transporter protein thrC 689831 - 691321 + | threonine synthase CKL_0705 692117 - 693181 + | signal transduction protein TERM 932 694364 - 694348 - g 71 -2.9 -5.22289 | opp_overlap 694360, overlap 694349 694359 694360 CAGTAAAGATAAAAA TGGAGAT ATA ATCCCCT CGGAAGCGGCTTTAG CKL_0706 693221 - 696928 + | ATP-dependent exonuclease TERM 933 697018 - 697062 + T 72 -6.7 -4.10672 | opp_overlap 697017 697018 697034, overlap 697020 TCAATATATACAAAT TTTTATGGCTGTATAATAAAA AAA TTTTATTATAGAGCCAAAATG TTTCATTTGAGTTAA TERM 934 697020 - 697060 + T 93 -11.5 -3.64028 | opp_overlap 697018 697017 697034, overlap 697018 AATATATACAAATTT TTATGGCTGTATAATAAAA AAA TTTTATTATAGAGCCAAAA TGTTTCATTTGAGTT TERM 935 697318 - 697283 - T 86 -6.4 -5.3167 | opp_overlap 697283 TAAAAACAAAGAAAA GCCAAACTTTGTTA GTAGTAGA TAACAAAATTTGAC TTTATAAAAATTAAT CKL_0707 697995 - 697357 - | amino acid ABC transporter permease TERM 936 697910 - 697890 - G 71 -8.3 -3.25823 | TTTTTCCTACAGCAA CTATACCAC CGA GGGGTATAG AAAAAATAGCAGTTA CKL_0708 698822 - 698016 - | extracellular amino acid-binding protein TERM 937 698957 - 699008 + r 76 -8.4 -3.65143 | gap 1, opp_overlap 698963, overlap 698955 698961 698963 698977 AATATATTAAAGAGG GAAAAACCCTTAAAGTATAATTGAA CAT TTCAATT-TACTTTAAGGGTATTGG TATTTACTTTCCTGT TERM 938 698961 - 699004 + r 100 -13.6 -3.52063 | gap 1, opp_overlap 698963, overlap 698957 698955 698963 698977 TATTAAAGAGGGAAA AACCCTTAAAGTATAATTGAA CAT TTCAATT-TACTTTAAGGGTA TTGGTATTTACTTTC TERM 939 698963 - 699002 + r 100 -16.2 -3.31511 | gap 1, opp_overlap 698963, overlap 698961 698957 698955 698977 TTAAAGAGGGAAAAA CCCTTAAAGTATAATTGAA CAT TTCAATT-TACTTTAAGGG TATTGGTATTTACTT TERM 940 699002 - 698963 - R 100 -16.2 -4.77986 | gap 1, opp_overlap 698963 698961 698957 698955 698977 TTAAAGAGGGAAAAA CCCTTAAAGTATAATTGAA CAT TTCAATT-TACTTTAAGGG TATTGGTATTTACTT CKL_0709 702074 - 699012 - | peptidase TERM 941 701948 - 701964 + g 79 -8.1 -4.1523 | AGGTTTTTCCTACTT CATTACA CGT TGTAATG TTTGTATCTGATGCA TERM 942 702984 - 702968 - g 73 -4.3 -4.9755 | ACATAGAATTAAAAA GTCCCAC ACT GGAGGAC TGTAGAGATGATTTT TERM 943 704315 - 704329 + G 87 -8.6 -4.18018 | opp_overlap 704317 ATGCTGCAGGTGAAG GAGCTA AAA TAGCTC TTTTAAGTACAGACA CKL_0710 702559 - 704502 + | iron-sulfur cluster-binding protein CKL_0712 706677 - 705355 - | subtilisin related protease CKL_0711 704557 - 705438 + | uroporphyrinogen decarboxylase-related protein TERM 944 706671 - 706683 + gF 70 -6.3 -4.12198 | ATTTTATTATATATC TCTTC ATA GAAGA TTTTGAAGAATTATC TERM 945 706808 - 706785 - fH 70 -8.2 -3.12595 | overlap 706783 GGCAATTAGCTAATA CTCCCACCTT CTTC AAAGTGGAAG ATAAGCACTGAGATG hemB 707005 - 707973 + | delta-aminolevulinic acid dehydratase TERM 946 708862 - 708852 - g 75 -2.6 -5.57054 | AAGAACTTAAAAAAA TATA TTT TATA GAAAAAGTATTTCCA cobD1 708026 - 709093 + | CobD1 cobO 709147 - 709686 + | CobO TERM 947 709862 - 709875 + G 70 -3.9 -5.00895 | opp_overlap 709862 GAAACTTATGAAAGA TTATG ATGC CATAA TTTTTGTATCCTCCA TERM 948 710465 - 710451 - g 70 -7.2 -3.64984 | overlap 710449 AGAGCTGTTAAAATA GTTACA TCC TGTAAC ATTAAAAGTGAAGAA cbiG 709719 - 710717 + | cobalamin biosynthesis protein CbiG CKL_0717 710772 - 711638 + | PduX-related protein TERM 949 712366 - 712346 - g 71 -6.9 -4.05446 | overlap 712349 GTGTTGAAGCAGAAA GGAGCTTTT TAA AAAAGCTTC AAGGTGACTGCCACA hemC 711622 - 712539 + | porphobilinogen deaminase hemD 712568 - 714040 + | hypothetical protein cbiK 714052 - 714912 + | CbiK cbiP 714897 - 716396 + | cobyric acid synthase TERM 950 717133 - 717122 - g 70 -4.4 -4.77986 | GGAAACATTTAAAAA TTGC AGTA GCAA AGGATAAAGCTTTCA cbiB 716401 - 717723 + | hypothetical protein TERM 951 718094 - 718068 - g 77 -8 -3.81691 | AAGACAGAGGAATAA CCCGCTCTATGG CAG CCATAGAAAGAG CTTCAGAGGAGGGAA cbiC 717731 - 718357 + | precorrin-8X methylmutase TERM 952 718891 - 718917 + G 75 -9.6 -2.87211 | overlap 718893 GGGGCATATCTATTT TAGGTACTAC GGGAATA GTAGTACCTA TGTCTGAGGAAGCAT cbiD 718368 - 719465 + | cobalt-precorrin-6A synthase TERM 953 719813 - 719827 + G 77 -10 -2.60763 | opp_overlap 719802 719811, overlap 719812 AAAACTAGGAAAGTC CTGGCA AAA TGCCAG ATTGTGCAGTCTACA cbiE 719481 - 720095 + | CbiE cbiT 720092 - 720652 + | CbiT cbiL 720666 - 721331 + | cobalt-precorrin-2 C(20)-methyltransferase TERM 954 721422 - 721410 - g 72 -4.9 -4.75309 | GTAAAGGGAAGAAAA CTTTT AAA AAAAG CAGATGTGGTTATAT cbiF 721347 - 722102 + | CbiF cbiJ 722099 - 722887 + | cobalt-precorrin-6x reductase cbiH 722902 - 723621 + | CbiH cobU 723677 - 724234 + | adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase TERM 955 724485 - 724467 - g 84 -5.3 -5.4477 | overlap 724468 AAAGGGCTAAAAAAA CTGCTGA GATTA TCAGCAA AAATATAATTTACGA cobC2 724283 - 724864 + | CobC2 TERM 956 724877 - 724916 + T 84 -9 -3.98804 | gap 1, opp_overlap 724874, overlap 724878 724880 TAATTATAATGATTT TA-ACCCTCTTAATAAT TGACTAT ATTATTAAGAGGGTCTA TTGTTTGGAATTTAA TERM 957 724878 - 724914 + T 84 -9.7 -3.57619 | opp_overlap 724874, overlap 724877 724880 AATTATAATGATTTT AACCCTCTTAATAAT TGACTAT ATTATTAAGAGGGTC TATTGTTTGGAATTT TERM 958 724880 - 724912 + T 95 -12.3 -3.35054 | opp_overlap 724874, overlap 724878 724877 TTATAATGATTTTAA CCCTCTTAATAAT TGACTAT ATTATTAAGAGGG TCTATTGTTTGGAAT CKL_0733 725346 - 724945 - | hypothetical protein TERM 959 725273 - 725263 - G 71 -6.8 -4.15249 | opp_overlap 725263 725259 AAACATGAAACCAAA GGGT CTA ACCC TAGGTTTTCCATCTT TERM 960 725315 - 725327 + g 79 -4.9 -5.12971 | AGAAATCCATATCCA TTTTC TTT GAAAA TTTTTATTACCTCTT CKL_0734 725470 - 725871 + | transcriptional regulator TERM 961 725864 - 725906 + T 86 -9.4 -3.74902 | opp_overlap 725869, overlap 725869 TGCAGACAAATAAGA AAAAATAGTATAACCATGAT TTT AACAAGGTTATACTATTTTG TGTTTTGATAAATAT TERM 962 725901 - 725869 - T 100 -9.3 -5.74288 | opp_overlap 725869 725864 ACAAATAAGAAAAAA TAGTATAACCATGAT TTT AACAAGGTTATACTA TTTTGTGTTTTGATA TERM 963 725869 - 725901 + T 100 -9.3 -4.91977 | opp_overlap 725869, overlap 725864 ACAAATAAGAAAAAA TAGTATAACCATGAT TTT AACAAGGTTATACTA TTTTGTGTTTTGATA CKL_0735 727950 - 725941 - | methyl-accepting chemotaxis protein TERM 964 726676 - 726694 + g 70 -6.2 -4.32046 | overlap 726688 TTTTGTAACCTTATC TATTTTAT TTG ATAAAATA TTTAATTTTTCAAGA TERM 965 728081 - 728048 - H 90 -8.5 -4.70511 | opp_overlap 728045, overlap 728045 728074 TTAAAAATAAAATAA CTTAATTATTTATTA AAAT TAATAGATAATTAAG AAATTATTGCTAATA TERM 966 728125 - 728146 + H 82 -6.1 -5.14645 | opp_overlap 728112 728119 728125 728128 CATATAAAATTACAA TAATATTTA TAAA TAAATATTA TTTTTATTGAATTAT bdh1 728400 - 729545 + | Bdh1 CKL_0737 729574 - 729717 + | hypothetical protein CKL_0738 729798 - 731453 + | RocB-related protein TERM 967 731446 - 731489 + T 91 -6.9 -5.4756 | opp_overlap 731446 731453, overlap 731451 731453 AATTTTTATATGAAA CGAGATAGTCTAGTCCT ATTTAAAGGC AGGACTAGACCATTTTG TTTTTTATTAAGATT TERM 968 731451 - 731484 + T 82 -5.4 -5.55001 | opp_overlap 731446 731453, overlap 731446 731453 TTATATGAAACGAGA TAGTCTAGTCCT ATTTAAAGGC AGGACTAGACCA TTTTGTTTTTTATTA TERM 969 731482 - 731453 - T 73 -8.7 -3.07629 | opp_overlap 731451 731446 731453, overlap 731446 ATATGAAACGAGATA GTCTAGTCCTA TTTAAAGG CAGGACTAGAC CATTTTGTTTTTTAT CKL_0739 732968 - 731580 - | permease CKL_0740 733276 - 733938 + | transporter protein CKL_0741 733965 - 734462 + | flavodoxin TERM 970 734470 - 734498 + F 91 -7.6 -5.33026 | overlap 734472 TAAAGTAAGTTATGC TGCTCATGGATT TGTAT AATCTATGAGTA TTTTTATTTAAATTG TERM 971 734472 - 734496 + F 81 -8 -4.2793 | overlap 734470 AAGTAAGTTATGCTG CTCATGGATT TGTAT AATCTATGAG TATTTTTATTTAAAT TERM 972 734613 - 734588 - f 88 -9.3 -4.25283 | ATTTGCTTATTAAAA GTATTATTTTA TTAA TAAAATAATAC TAAAAATACCACTTA CKL_0742 734675 - 734920 + | hypothetical protein TERM 973 735222 - 735254 + F 70 -5.1 -4.68545 | opp_overlap 735226 735233 735240, overlap 735224 735233 735235 GGGAAAATTATTTAG ACTATTACAAATATA AAA TATATTTGTAATATA TTTTATATCTTAAAT TERM 974 735224 - 735252 + F 100 -12.1 -3.94954 | opp_overlap 735226 735233 735240, overlap 735222 735233 735235 GAAAATTATTTAGAC TATTACAAATATA AAA TATATTTGTAATA TATTTTATATCTTAA TERM 975 735250 - 735226 - f 81 -10.3 -2.66008 | opp_overlap 735224 735222 735233 735235, overlap 735233 735240 AAATTATTTAGACTA TTACAAATATA AAA TATATTTGTAA TATATTTTATATCTT TERM 976 735261 - 735233 - f 95 -10.7 -4.00782 | opp_overlap 735224 735222 735233 735235, overlap 735226 735240 TTAGACTATTACAAA TATAAAATATATT TGT AATATATTTTATA TCTTAAATAATCAGA TERM 977 735233 - 735261 + F 88 -10.7 -3.10796 | opp_overlap 735226 735233 735240, overlap 735224 735222 735235 TTAGACTATTACAAA TATAAAATATATT TGT AATATATTTTATA TCTTAAATAATCAGA TERM 978 735235 - 735259 + F 76 -8.9 -3.11316 | opp_overlap 735226 735233 735240, overlap 735224 735222 735233 AGACTATTACAAATA TAAAATATATT TGT AATATATTTTA TATCTTAAATAATCA TERM 979 735254 - 735240 - f 71 -4.4 -4.85822 | opp_overlap 735224 735222 735235 735233, overlap 735226 735233 ATTACAAATATAAAA TATATT TGT AATATA TTTTATATCTTAAAT CKL_0743 735503 - 737506 + | enoate reductase TERM 980 737754 - 737789 + T 78 -9.9 -2.64051 | opp_overlap 737763 737766, overlap 737752 737763 TTAAATGATTTAGAC AAGAAAAAAGATGCC CATATA GGCGTCTTTTTTCTA TGAATTATCTAATAG TERM 981 737780 - 737763 - T 79 -3.3 -5.60689 | opp_overlap 737754 737752 737763, overlap 737766 TTAGACAAGAAAAAA GATGCCC ATAT AGGCGTC TTTTTTCTATGAATT TERM 982 737763 - 737780 + T 79 -4.8 -5.38951 | opp_overlap 737763 737766, overlap 737754 737752 TTAGACAAGAAAAAA GATGCC CATATA GGCGTC TTTTTTCTATGAATT CKL_0744 738496 - 737831 - | hypothetical protein TERM 983 738673 - 738656 - R 77 -6.3 -4.74504 | opp_overlap 738656 ATTTTAATGGAAAAA GACACTA TATT TAGTGCC CTTTTTCAAGAATTC CKL_0745 739073 - 738687 - | hypothetical protein CKL_0746 739385 - 741430 + | enoate reductase TERM 984 741486 - 741438 - f 71 -7.2 -3.88603 | gap 1, opp_overlap 741438 741439 741445, overlap 741439 741445 ATCTATAAAAATTAA TCTAAAATATACTATAGATAATA TTAA TTTTA-CTATAGTATATTTTAGT ATTGTATATTTAAGG TERM 985 741439 - 741485 + F 90 -10.7 -3.46008 | gap 1, opp_overlap 741438 741439 741445, overlap 741438 741445 TCTATAAAAATTAAT CTAAAATATACTATAGATAATA TTAA TTTTA-CTATAGTATATTTTAG TATTGTATATTTAAG TERM 986 741485 - 741439 - f 86 -10.7 -2.92077 | gap 1, opp_overlap 741439 741438 741445, overlap 741438 741445 TCTATAAAAATTAAT CTAAAATATACTATAGATAATA TTAA TTTTA-CTATAGTATATTTTAG TATTGTATATTTAAG CKL_0747 741509 - 742321 + | hypothetical protein TERM 987 742448 - 742471 + F 76 -3.9 -5.4505 | TGTATATATTAAAAA TAAGTACCT TTATTT AGGTGCTTG TTTTTTGTTCAAAAA TERM 988 742692 - 742670 - f 85 -2.9 -6.04324 | gap 1, overlap 742672 TTAAAAAAGAAAAAA TAGTATATAC TGAT GTATATAC-A GTAGAACGGTAAATC TERM 989 742691 - 742672 - f 82 -8 -4.6155 | overlap 742670 AAAAAAGAAAAAATA GTATATAC TGAT GTATATAC AGTAGAACGGTAAAT TERM 990 742711 - 742729 + F 70 -6.2 -4.1466 | opp_overlap 742714, overlap 742714 GAACGGTAAATCTTA TAATTAAA ATA TTTAATTA TTTTAAGAGTTAGCT nadA 742787 - 743698 + | hypothetical protein nadB 743727 - 745316 + | hypothetical protein TERM 991 745890 - 745875 - g 72 -2.6 -5.42164 | TAGAAAGAATAAAAA GTAAAA TCCC CTTTAC TACTAAAATCGAAGT nadC 745328 - 746158 + | hypothetical protein TERM 992 746178 - 746214 + T 91 -10.6 -4.41114 | gap 1, opp_overlap 746175 746178 746180 746182 TATTATGTAGAAGTA TAGAGTTAAAG-ATAAA TAAA TTTATTCTTTAACTCTA TTTATTATGTGATAA TERM 993 746214 - 746178 - T 83 -10.6 -2.85216 | gap 1, opp_overlap 746178, overlap 746175 746180 746182 TATTATGTAGAAGTA TAGAGTTAAAG-ATAAA TAAA TTTATTCTTTAACTCTA TTTATTATGTGATAA TERM 994 746212 - 746180 - T 73 -8.8 -2.97245 | gap 1, opp_overlap 746178, overlap 746178 746175 746182 TTATGTAGAAGTATA GAGTTAAAG-ATAAA TAAA TTTATTCTTTAACTC TATTTATTATGTGAT CKL_0751 747277 - 746219 - | hypothetical protein prfC 749099 - 747507 - | PrfC TERM 995 749256 - 749285 + r 71 -8.7 -2.95102 | opp_overlap 749257, overlap 749255 749259 AAATTCAATTTAAAA ACACCAAGTATTG CTTC TAATACTTGGTGC CTTTATAACTAAACT TERM 996 749284 - 749257 - R 100 -11.5 -4.75776 | opp_overlap 749256 749255 749259 AATTCAATTTAAAAA CACCAAGTATT GCTTCT AATACTTGGTG CCTTTATAACTAAAC TERM 997 749259 - 749282 + r 73 -9 -2.71325 | opp_overlap 749257, overlap 749256 749255 TTCAATTTAAAAACA CCAAGTATTG CTTC TAATACTTGG TGCCTTTATAACTAA CKL_0753 749750 - 749301 - | hypothetical protein CKL_0754 750846 - 749863 - | phosphatase TERM 998 750099 - 750109 + g 79 -2.6 -5.72616 | AACTAAATAAAATTT TAAA TAA TTTA TTTTTTTCTCTAAGT TERM 999 750806 - 750824 + g 85 -3.2 -5.94713 | AGTCCATAAAATTTA TATTCATT CAT AGTGGATA TTTTTTTTATAAACT TERM 1000 751651 - 751669 + G 88 -9 -4.32579 | opp_overlap 751650 TAATGGAGAGAAATT TGCAAATA ATG TATTTGCA TTTATTATAGCATGT CKL_0755 751307 - 751864 + | hypothetical protein TERM 1001 751949 - 751925 - f 95 -10.8 -4.15703 | opp_overlap 751924 751922 751925 751945, overlap 751926 GTTTACAAACAATAA CTAGGAGGGA TAAAT TCCCTCCTAA GATTATTATCTAGGT TERM 1002 751925 - 751950 + F 71 -8.4 -2.93332 | gap 1, opp_overlap 751925 751926, overlap 751924 751922 751945 GTTTACAAACAATAA CT-AGGAGGGA TAAAT TCCCTCCTAAG ATTATTATCTAGGTC TERM 1003 751948 - 751926 - f 95 -12.1 -3.08699 | opp_overlap 751925 751924 751922 751945, overlap 751925 TTTACAAACAATAAC TAGGAGGGA TAAAT TCCCTCCTA AGATTATTATCTAGG TERM 1004 752284 - 752304 + F 86 -6.3 -5.31877 | opp_overlap 752284 ATTCTAATAAAAAAA CAATGTTTT AGA AAAATATTG TTTTTTGTAATGGCT TERM 1005 752304 - 752284 - f 84 -4.1 -5.80364 | opp_overlap 752284 ATTCTAATAAAAAAA CAATGTTTT AGA AAAATATTG TTTTTTGTAATGGCT TERM 1006 752563 - 752544 - g 71 -3 -5.22312 | ATGGATACTAAAAAA TTTCTTAA TTTA TTAAAAAA AATAGAAGGACCTAA CKL_0756 752529 - 753671 + | hypothetical protein CKL_0757 753828 - 754241 + | hypothetical protein TERM 1007 754298 - 754329 + F 78 -7.4 -4.4773 | opp_overlap 754299 754304, overlap 754299 ATGGTGATTTTATAT ATTCAAGACTGGAA ACCT TTCCAGTCTTAAAA TTTTACTTAATATGA TERM 1008 754328 - 754299 - f 100 -13.1 -2.89564 | opp_overlap 754299 754298, overlap 754304 TGGTGATTTTATATA TTCAAGACTGGAA ACCT TTCCAGTCTTAAA ATTTTACTTAATATG TERM 1009 754299 - 754328 + F 90 -10.9 -3.27915 | opp_overlap 754299 754304, overlap 754298 TGGTGATTTTATATA TTCAAGACTGGAA ACCT TTCCAGTCTTAAA ATTTTACTTAATATG TERM 1010 754323 - 754304 - f 90 -10.8 -3.16177 | opp_overlap 754299 754298, overlap 754299 ATTTTATATATTCAA GACTGGAA ACCT TTCCAGTC TTAAAATTTTACTTA tyrS1 754445 - 755665 + | tyrosyl-tRNA synthetase TERM 1011 755657 - 755641 - T 77 -5.3 -5.12068 | opp_overlap 755641 GAGAGGTAAGAAAAA TTATAAT AGA ATTATAA TTAAGTAAAATAATT TERM 1012 755689 - 755747 + T 95 -12.3 -3.72315 | gap 1, opp_overlap 755692, overlap 755684 755692 755745 AATATGTAAAGTCTA TAAGGCTGTTTTTATAAATTAA-AGGTG AGTG TGCCTATTAAGTTATAAAAACAGTCTTA TATTTTAAATATGAT TERM 1013 755692 - 755744 + T 87 -9.6 -3.98224 | gap 1, opp_overlap 755692, overlap 755684 755689 ATGTAAAGTCTATAA GGCTGTTTTTATAAATTAA-AGGTG AGTG TGCCTATTAAGTTATAAAAACAGTC TTATATTTTAAATAT CKL_0759 756201 - 755752 - | acetyltransferase CKL_0760 756907 - 756194 - | metal-dependent glycoprotein endopeptidase CKL_0761 757367 - 756912 - | ATP-binding protein TERM 1014 756971 - 756981 + g 79 -6.8 -4.66318 | CTATGGTTATTTTTC TCCC ATT GGGA TTTTCTTCAGGTAAT CKL_0762 758706 - 757405 - | metal dependent phosphohydrolase CKL_0763 758980 - 759909 + | metal binding protein CKL_0764 760000 - 760815 + | esterase TERM 1015 760857 - 760909 + F 100 -11.2 -4.57569 | opp_overlap 760873, overlap 760859 760873 AATACCATCCAGCTA TCTGTAAATTTAAAAATCTGCAC-TA CTT TATGTGCAGATTTTTAAATT-ACAAA TTTTTACACAAATAA TERM 1016 760859 - 760907 + F 100 -13.8 -2.60211 | opp_overlap 760873, overlap 760857 760873 TACCATCCAGCTATC TGTAAATTTAAAAATCTGCAC-TA CTT TATGTGCAGATTTTTAAATT-ACA AATTTTTACACAAAT TERM 1017 760894 - 760873 - f 79 -6.7 -4.81249 | gap 1, opp_overlap 760859 760857 760873 CTGTAAATTTAAAAA TCTGCAC-TA CTT TATGTGCAGA TTTTTAAATTACAAA TERM 1018 760873 - 760894 + F 79 -6.7 -4.74103 | gap 1, opp_overlap 760873, overlap 760859 760857 CTGTAAATTTAAAAA TCTGCAC-TA CTT TATGTGCAGA TTTTTAAATTACAAA CKL_0765 761233 - 762876 + | hypothetical protein CKL_0766 763857 - 762964 - | transporter protein CKL_0767 764128 - 764979 + | N-dimethylarginine dimethylaminohydrolase-related protein TERM 1019 765005 - 765046 + F 71 -7.5 -3.61089 | opp_overlap 765008 765011 765013, overlap 765008 ATAGACGAGAGAATA TAATGACACATGAACATAT ATTT ATATGTTCATGTGAAAATA TTATAGTTCTTACAA TERM 1020 765008 - 765043 + F 73 -9.2 -2.61976 | opp_overlap 765008 765011 765013, overlap 765005 GACGAGAGAATATAA TGACACATGAACATAT ATTT ATATGTTCATGTGAAA ATATTATAGTTCTTA TERM 1021 765043 - 765008 - f 82 -9.2 -3.80945 | opp_overlap 765008 765005, overlap 765011 765013 GACGAGAGAATATAA TGACACATGAACATAT ATTT ATATGTTCATGTGAAA ATATTATAGTTCTTA TERM 1022 765040 - 765011 - f 100 -15.3 -2.98062 | opp_overlap 765008 765005, overlap 765008 765013 GAGAGAATATAATGA CACATGAACATAT ATTT ATATGTTCATGTG AAAATATTATAGTTC TERM 1023 765038 - 765013 - f 95 -12.1 -3.03218 | opp_overlap 765008 765005, overlap 765011 765008 GAGAATATAATGACA CATGAACATAT ATTT ATATGTTCATG TGAAAATATTATAGT CKL_0768 765117 - 765569 + | hypothetical protein CKL_0769 765566 - 765814 + | succinate dehydrogenase, flavoprotein subunit TERM 1024 765934 - 765914 - g 85 -8.3 -4.36914 | TTTTGGTGGACAAAA GAAAAAGCG TAC CGCTTTTGC TATGGGTATACGGGA CKL_0770 765801 - 765959 + | hypothetical protein CKL_0771 765959 - 766102 + | succinate dehydrogenase, flavoprotein subunit TERM 1025 766093 - 766109 + F 77 -9.5 -2.82895 | opp_overlap 766091 766090, overlap 766092 766095 TGTTATAAACAACCG TACAGAG TGA CTCTGTA GTTATTGCTGCAGGA CKL_0772 766128 - 766406 + | succinate dehydrogenase, flavoprotein subunit CKL_0773 766416 - 767219 + | succinate dehydrogenase, flavoprotein subunit TERM 1026 767504 - 767491 - g 74 -5.3 -4.81851 | ACTTAAATGCAAAAA GAACA CCAT TGTTC TGGAACCACTAAGCA TERM 1027 767819 - 767809 - g 80 -5.4 -5.18561 | GAAATATCGAAAAAA CTTC TTT GAAG GATGTGGTAAATCTT CKL_0774 767219 - 767920 + | succinate dehydrogenase iron-sulfur protein TERM 1028 767965 - 767921 - T 75 -7.5 -4.06687 | opp_overlap 767927, overlap 767922 ATTTGGCATAAATAA TTGAAATATAGTAAAAATATA TAT TGCATTTTCACTATATTTCAG CAATCTTAGTTGATA TERM 1029 767964 - 767922 - T 88 -11 -3.0353 | opp_overlap 767927, overlap 767921 TTTGGCATAAATAAT TGAAATATAGTAAAAATATA TAT TGCATTTTCACTATATTTCA GCAATCTTAGTTGAT CKL_0775 769360 - 768002 - | hypothetical protein TERM 1030 769283 - 769273 - G 74 -6.8 -4.34267 | opp_overlap 769272 CTATACAATCTAAAA GGGA TAT TCCC ATGGTTATAGTTCTT CKL_0776 769648 - 769379 - | hypothetical protein proV 770111 - 771295 + | ProV proW 771297 - 772121 + | ProW proX 772142 - 773041 + | ProX TERM 1031 773113 - 773141 + F 88 -7.5 -4.86133 | opp_overlap 773113 GATGTAGATTAAAAA GGGGTTTACGGAA TGT TTATGTAAACTCC TTTTTGATCTATCTA CKL_0780 773370 - 774113 + | 3-ketoacyl-(acyl-carrier-protein) reductase TERM 1032 774536 - 774526 - g 71 -5.4 -4.5538 | overlap 774504 ATAAAATGCATAAAA GAAG GTA CTTC GGATTATATATTAAA CKL_0781 774241 - 775077 + | transcriptional regulator CKL_0782 776465 - 775137 - | hypothetical protein TERM 1033 776948 - 776959 + G 81 -4.4 -5.45802 | TTTTAACTTTACTTT TAGC TGGG GCTA TTTTTATTTTAGCGC CKL_0783 776877 - 777029 + | hypothetical protein TERM 1034 777090 - 777109 + F 100 -12.2 -5.63517 | opp_overlap 777090 777093 TTTAGTTAATTCAAA CAAGGCTC ATTA GAGCCTTG TTTTTTATTTGGAAA TERM 1035 777109 - 777090 - f 95 -12.2 -3.76952 | opp_overlap 777090, overlap 777093 TTTAGTTAATTCAAA CAAGGCTC ATTA GAGCCTTG TTTTTTATTTGGAAA TERM 1036 777106 - 777093 - f 78 -8.1 -4.01381 | opp_overlap 777090, overlap 777090 AGTTAATTCAAACAA GGCTC ATTA GAGCC TTGTTTTTTATTTGG TERM 1037 777832 - 777820 - g 82 -7.7 -4.58283 | opp_overlap 777808 777805 777820, overlap 777809 CAATTCTTTTAAAAA GAGGA TTG TCCTC TACTATTGAAGAACT aroF 777195 - 778229 + | 3-deoxy-7-phosphoheptulonate synthase TERM 1038 778940 - 778925 - g 71 -7.6 -3.38314 | overlap 778923 GGGAAGCTTTAAAGA TGCTAC CAGA GTAGCA CAGATTAATTCTAAA tyrA 778257 - 779129 + | hypothetical protein aroB 779135 - 780214 + | 3-dehydroquinate synthase aroA 780255 - 781535 + | 3-phosphoshikimate 1-carboxyvinyltransferase aroC 781513 - 782595 + | chorismate synthase TERM 1039 783119 - 783103 - g 74 -6.6 -4.18197 | opp_overlap 783103 ACTGCCTATTGAAAA TTCCTC TACAG GAGGAA TTCTGGAAGTATATG pheA 782624 - 783763 + | hypothetical protein aroE1 783795 - 784604 + | AroE1 aroK 784682 - 785191 + | hypothetical protein TERM 1040 785511 - 785501 - g 72 -2.6 -5.36018 | opp_overlap 785505 AGGAAAAAAAAGAAA TAAA TTA TTTA GGAGATAATATTAAA CKL_0792 785338 - 785769 + | hypothetical protein CKL_0793 785800 - 786462 + | hypothetical protein CKL_0794 786567 - 787325 + | hypothetical protein TERM 1041 787394 - 787433 + F 75 -5.4 -4.85599 | opp_overlap 787396 787401 787427, overlap 787396 787401 TTATAATAAATATAT AATAAAATTTAAACAT AATATCAA ATGTTTAAATTTTATA TTTTTATAAAATAAC TERM 1042 787431 - 787396 - f 76 -8 -3.84463 | opp_overlap 787394 787396 787401, overlap 787401 787427 ATAATAAATATATAA TAAAATTTAAACAT AATATCAA ATGTTTAAATTTTA TATTTTTATAAAATA TERM 1043 787396 - 787431 + F 78 -8 -4.05067 | opp_overlap 787396 787401 787427, overlap 787394 787401 ATAATAAATATATAA TAAAATTTAAACAT AATATCAA ATGTTTAAATTTTA TATTTTTATAAAATA TERM 1044 787474 - 787445 - f 76 -7.1 -4.39426 | gap 1, overlap 787448 787451 TATATTTTTATAAAA TAACCACCCCGCCA GGG TGG-GGGGAGGTAA ATATGAATGAAGAAA TERM 1045 787464 - 787448 - f 91 -10.1 -4.31397 | overlap 787445 787451 ATTTTTATAAAATAA CCACCCC GCC AGGGTGG GGGGAGGTAAATATG TERM 1046 787504 - 787494 - g 86 -4 -5.87996 | GAATGAAGAAAAAAA GAAA GCA TTTC AGGCATTAAAGACTT CKL_0795 787477 - 787749 + | hypothetical protein TERM 1047 789154 - 789136 - g 78 -6.8 -4.42974 | overlap 789153 GGGATATAGAAGAAA GCTATTTA CTT CAAATAGC CGCATCTGCAGAAAA actP 787761 - 790016 + | ActP CKL_0797 790084 - 790317 + | copper-binding protein TERM 1048 790370 - 790397 + F 100 -11.4 -5.31519 | opp_overlap 790370, overlap 790393 TTTTAATGGATGGAA TTGGGTCGGTAA TTTA TTACCGGCCTAA TTTTTATTTAGGTGT TERM 1049 790632 - 790620 - g 79 -3.3 -5.64321 | opp_overlap 790621, overlap 790621 ACAACAAAATAAAAA TTGCC ATA GGCAT AGATTCTAGGCTGTC pgm1 790451 - 791971 + | Pgm1 TERM 1050 792065 - 792106 + F 91 -10.5 -4.37886 | opp_overlap 792070 792101, overlap 792070 TTATACTATACAGGC TAATAGTGATATACTATAA TATA TTATAGTATATCACTTATA TTTTATAAAAAATAA TERM 1051 792101 - 792070 - f 100 -14.8 -3.08934 | opp_overlap 792065 792070 CTATACAGGCTAATA GTGATATACTATAA TATA TTATAGTATATCAC TTATATTTTATAAAA TERM 1052 792070 - 792101 + F 100 -14.8 -4.02581 | opp_overlap 792070, overlap 792065 CTATACAGGCTAATA GTGATATACTATAA TATA TTATAGTATATCAC TTATATTTTATAAAA fbp 792138 - 794138 + | Fbp TERM 1053 794243 - 794300 + T 70 -8.7 -2.59738 | overlap 794260 ACCTTTATAAGTTCT TCTTATGTTCAGGCGGAGAAAAGC-AT TTCTTT ATAGCAAA-CTCCGCCTGAACATAAGA ATCATTTTTATAATA cls 795738 - 794308 - | Cls CKL_0801 796095 - 796490 + | hypothetical protein CKL_0802 796731 - 796910 + | hypothetical protein TERM 1054 797071 - 797056 - f 72 -4.8 -4.88918 | opp_overlap 797044 797054, overlap 797051 GCAGGTTAAATAAAA CATTTA GCCT TAAATG TATAAATTATGTGAT CKL_0803 797106 - 797540 + | hypothetical protein TERM 1055 797847 - 797872 + F 100 -10.5 -5.95449 | GTACCGCGGGTGATA TCTCCGTCCTA GTTT TAGGATGGGGA TTTTTTATTTTATTT TERM 1056 798096 - 798081 - g 70 -4.6 -4.77867 | opp_overlap 798081 798079 798086 ATAGAGAATATAAAA CCTGTC TTGC GGCAGG TATTGTAGCAGGTAT CKL_0804 797930 - 798445 + | transporter protein CKL_0805 798581 - 798778 + | small acid-soluble spore protein TERM 1057 798797 - 798822 + F 73 -7.5 -3.72532 | opp_overlap 798797 AACTGTTATAAAAAT GGCCGGGTG GGATTTAA CGCCCGGTC TTAATTTATTCATTC CKL_0806 798924 - 800441 + | hypothetical protein CKL_0807 800746 - 801339 + | hypothetical protein TERM 1058 801409 - 801380 - f 89 -7.9 -5.05782 | opp_overlap 801383, overlap 801367 801381 801383 AGTTAGGTTAAAAAA TCACCCTAAGTCT GAAT AGACTTAGGGTTT TAATAGTAGGAGGAA TERM 1059 801408 - 801381 - f 93 -11.4 -3.62746 | opp_overlap 801383, overlap 801367 801380 801383 GTTAGGTTAAAAAAT CACCCTAAGTCT GAAT AGACTTAGGGTT TTAATAGTAGGAGGA TERM 1060 801383 - 801406 + F 100 -14 -4.30576 | opp_overlap 801367 801381 801380 801383 TAGGTTAAAAAATCA CCCTAAGTCT GAAT AGACTTAGGG TTTTAATAGTAGGAG TERM 1061 801406 - 801383 - f 100 -14 -3.38726 | opp_overlap 801383, overlap 801367 801381 801380 TAGGTTAAAAAATCA CCCTAAGTCT GAAT AGACTTAGGG TTTTAATAGTAGGAG CKL_0808 801428 - 802387 + | hypothetical protein TERM 1062 802400 - 802419 + F 91 -8 -5.00616 | TAATTTGTGGTATTT TTGCAATT TTTT AATTGCAA TTTTTTGACGAAACA CKL_0809 802549 - 803493 + | 30S ribosomal protein S1 TERM 1063 803521 - 803498 - f 71 -7 -3.82923 | opp_overlap 803486 803498 803501, overlap 803486 803496 AATTTAATTAAAAGA TAATTAATTT TTTC AAATTAATTA TATAATCTATGATAA CKL_0810 803674 - 805557 + | signal transduction protein TERM 1064 805704 - 805739 + T 82 -9.2 -3.79787 | opp_overlap 805708, overlap 805708 TCTATTCTGCAATTA TAAAGATCCTCTATTT TTTT GGATAGGGGATCTTTG TTTAAATTACTATGA TERM 1065 805708 - 805735 + T 80 -7.8 -4.50761 | opp_overlap 805708, overlap 805704 TTCTGCAATTATAAA GATCCTCTATTT TTTT GGATAGGGGATC TTTGTTTAAATTACT CKL_0811 806148 - 805780 - | hypothetical protein TERM 1066 806420 - 806432 + G 71 -7.7 -3.48395 | opp_overlap 806419 TGGTAAAAGAATATG GCATG ACC CATGC TTCTGTAGAAAAAGT CKL_0812 806332 - 806928 + | transcriptional regulator TERM 1067 807787 - 807797 + G 76 -5.4 -5.00616 | GCTTCTCGAATGGGT GCAT ACT ATGC TTTTTTCGGGGCACA CKL_0813 807001 - 808803 + | transport protein, ATPase and permease component TERM 1068 808872 - 808882 + F 71 -4 -5.13521 | AAATATACAAAACTT TTTC TGT GAAA TTTTTTAGATAGTTT TERM 1069 809631 - 809644 + G 83 -6.7 -4.88711 | TGGCTTTTAACAGGC GGAGA CATG TCTCC TTTTTACTATATTGT CKL_0814 808899 - 810572 + | transport protein, ATPase and permease component CKL_0815 811387 - 810647 - | polysaccharide deacetylase TERM 1070 811394 - 811374 - G 72 -2.7 -5.4833 | opp_overlap 811374 GTAGTTAATAAAAAA TGTTTAA TCTTCAT TTAAACA TATCTCCTTTGCTTT iscS 811562 - 812698 + | hypothetical protein TERM 1071 813605 - 813620 + G 89 -10.4 -3.91911 | opp_overlap 813592 813605, overlap 813592 ATCAGGCAGCAGATA GGCCTG TGTT CAGGCC TTTAATTGCCATGGA TERM 1072 813620 - 813605 - g 81 -10.4 -2.95476 | opp_overlap 813592 813605, overlap 813592 ATCAGGCAGCAGATA GGCCTG TGTT CAGGCC TTTAATTGCCATGGA thiI 812695 - 813840 + | hypothetical protein TERM 1073 813881 - 813851 - T 80 -9.8 -2.77994 | opp_overlap 813856 813863, overlap 813842 813856 TATAAATTTTAATCA TGAGATGCAGCT TGTTTGG AGCTGCATCTCT AAGCATTTAAACACT CKL_0818 815045 - 813897 - | protease CKL_0819 816347 - 815055 - | hypothetical protein CKL_0820 816808 - 817965 + | hypothetical protein TERM 1074 818001 - 817961 - T 73 -8 -3.35906 | gap 1, opp_overlap 817956 817961 817969, overlap 817957 817969 AAATAGAAGAATATA TTTA-AAAAGGATGTATTT TTAA ATATACATCCTTTTGTAAA CTTAATTATAATGTT TERM 1075 817969 - 817992 + T 74 -6.8 -4.43189 | opp_overlap 817957 817961 817969, overlap 817956 817961 GAATATATTTAAAAA GGATGTATTT TTAA ATATACATCC TTTTGTAAACTTAAT TERM 1076 817992 - 817969 - T 79 -6.8 -4.74453 | opp_overlap 817956 817969 817961, overlap 817957 817961 GAATATATTTAAAAA GGATGTATTT TTAA ATATACATCC TTTTGTAAACTTAAT CKL_0821 818632 - 818015 - | hypothetical protein TERM 1077 818515 - 818505 - G 71 -5.4 -4.55491 | CAGGGAATTACAAAA GAAG TGC CTTC AGTGATGCCAAGTTT TERM 1078 818990 - 819010 + H 91 -8.3 -5.05228 | CATTGAGGATGTAGA CTCAGGG ATTTACC CCCTGAG TTTTTATAATTTAAT TERM 1079 819055 - 819091 + H 100 -9.8 -5.83211 | gap 1, opp_overlap 819062 ACCAGAAAAACTGGA GACTGAATCTTA-ACTT TATA AAGTATAAGATTTAGTC TTTTTTGTTTTGATA TERM 1080 819441 - 819425 - g 81 -2.3 -5.97575 | opp_overlap 819425 AAGCCAGAAAAAAAA TTGGAAT GAT ATTTCAA GATTTTAATTTATTT CKL_0822 819175 - 819954 + | ABC transporter ATPase CKL_0823 819951 - 820619 + | ABC transporter permease TERM 1081 820987 - 821003 + G 71 -2.9 -5.22006 | opp_overlap 820984, overlap 820989 GTGGCTGGAAAAGTT CATGTGG AAC CCATAGG TTTTTATTCTGATAA TERM 1082 821396 - 821386 - g 78 -6.8 -4.3778 | AAAAAAGAAATTAAA GCCA TAG TGGC AAAGCTGAATTCAGA CKL_0824 820645 - 821469 + | ABC transporter substrate-binding protein nifD1 821854 - 823320 + | hypothetical protein nifK1 823320 - 824648 + | NifK1 TERM 1083 824940 - 824962 + F 100 -9.9 -5.2197 | opp_overlap 824940 AATCATGATATACAA CCCTCTTCT TGTTT GGAAGAGGG TTTTTGATTTTTATA TERM 1084 824962 - 824940 - f 80 -9.2 -3.63018 | opp_overlap 824940 AATCATGATATACAA CCCTCTTC TTGTTTG GAAGAGGG TTTTTGATTTTTATA CKL_0827 824966 - 825172 + | hypothetical protein TERM 1085 825811 - 825800 - g 88 -3 -6.37666 | AGAAAAGAAAAAAAA TGAA ATAC TTCA GATGGCGGTACTTGA CKL_0828 825339 - 826085 + | SufC TERM 1086 826265 - 826249 - g 79 -3.7 -5.52986 | overlap 826252 ATCTCATGAAAAAAA TGATCCA GCT TGGATGA GGGAATTTAGGCTTA CKL_0829 826115 - 827521 + | SufB TERM 1087 827773 - 827762 - g 77 -3 -5.59655 | opp_overlap 827762 TAAAGGAATAAAAAA TGAA TATT TTCA TGATTATCCCAGTTT TERM 1088 828150 - 828127 - g 70 -8.2 -3.05963 | opp_overlap 828124 ATTTCGATTGGAATA TGGCGCTTTT AAAG AAAAGCGCAA AAATAAATTGGATAA CKL_0830 827538 - 828692 + | SufD sufS 828692 - 829954 + | SufS nifU1 829941 - 830381 + | NifU1 TERM 1089 830432 - 830387 - T 71 -2.7 -5.44721 | opp_overlap 830391, overlap 830391 AGTAGTTTAAAAAAA TAAATCTCCTACCCTAAAA TCAGTATT TTTTTAGGTGGGAGATTTT TAATTAAAAAGCTGA TERM 1090 830428 - 830391 - T 72 -3.5 -5.20328 | opp_overlap 830391, overlap 830387 GTTTAAAAAAATAAA TCTCCTACCCTAAAA TCAGTATT TTTTTAGGTGGGAGA TTTTTAATTAAAAAG TERM 1091 830391 - 830428 + T 71 -4.4 -4.8622 | gap 1, opp_overlap 830387 830391 GTTTAAAAAAATAAA TCTCCTACCCTAAAA TCAGTATTT TTTTAG-GTGGGAGA TTTTTAATTAAAAAG add 831507 - 830461 - | adenosine deaminase TERM 1092 830531 - 830553 + g 80 -9.2 -3.76383 | opp_overlap 830548, overlap 830548 TATAGTTTATTTATA TCTTCCTTAG ATG CAAAGGAAGA TTCTATTCCATTTTT TERM 1093 831525 - 831570 + H 80 -3.8 -5.65678 | gap 2, overlap 831530 TAGTATCACTCCTCG TATAATAAGTTTATAGTAAGTT AAAT AACT-GCTATAGACTTATT-TA TTTTTTATATTTTGT TERM 1094 831530 - 831566 + H 86 -6.2 -5.19003 | gap 1, overlap 831525 TCACTCCTCGTATAA TAAGTTTATAGTAAGTT AAAT AACT-GCTATAGACTTA TTTATTTTTTATATT CKL_0834 831963 - 832955 + | transposase TERM 1095 833016 - 833035 + F 72 -6.6 -4.07868 | opp_overlap 833005, overlap 833000 833019 ACAATAAAGAGACTT TAATGTAT GTTA ATACATTA TTTGTCTAAATGTAA CKL_0835 833173 - 833343 + | hypothetical protein TERM 1096 833487 - 833477 - f 70 -5.4 -4.48741 | TAATGTATGATAAAA GCAT ATA ATGC TATAAGTCCTCTTAC TERM 1097 834531 - 834512 - f 71 -7.8 -3.64371 | gap 1, overlap 834514 AAGTGAGATGTGAAA GACCCGGGC TTA ACCCGGG-C AGTGCATTTCAAACT TERM 1098 834530 - 834514 - f 93 -11.5 -3.39844 | overlap 834512 GTGAGATGTGAAAGA CCCGGGC TTA ACCCGGG CAGTGCATTTCAAAC TERM 1099 835426 - 835407 - f 73 -9.2 -2.65808 | opp_overlap 835410 835413, overlap 835404 835419 AGTCGTAACAAGGTA GCCGTAGG AGAA CCTGCGGC TGGATCACCTCCTTT TERM 1100 835485 - 835469 - f 73 -4.3 -5.01732 | overlap 835456 AAGGCTGGGAAAAAA CCTGCCT TAA AAGCTGG AATTTGAGATAAATA TERM 1101 835709 - 835732 + F 72 -6.2 -4.27617 | AACCTTTGTAGTGGA TAAGTATAAA TGAG TTTATGCTTA TTTTAATAAGATGTA TERM 1102 836221 - 836204 - f 86 -9.9 -3.695 | GGGAAAGAGCCCAAA CCGGAAA CTTG TTTCCGG GGTAGAGGTCAGGTG TERM 1103 836387 - 836372 - f 81 -10.4 -2.71011 | ACCTTGTGGGAAGCA GGGAGG ACCA CCTCCC AAGGCTAAATACTAC TERM 1104 836461 - 836450 - f 75 -7.2 -4.2354 | GAAAGGTGAAAAGAA CCCC GGGA GGGG AGTGAAATAGAACCT TERM 1105 836514 - 836527 + F 71 -4.5 -4.82901 | opp_overlap 836514 TCGAAGTACGTTAAA GTACG ACGG CGTGC TTTTTGTAGAACGAG TERM 1106 838913 - 838940 + F 100 -7.8 -6.28967 | opp_overlap 838913 ATGTAAAGTTTTAAA CTTGATGTAGAG AGAT TTCTTCATCAAG TTTTTTTTGTTTATC TERM 1107 839147 - 839193 + F 95 -12.2 -3.58476 | opp_overlap 839150 839154, overlap 839150 839154 839189 ATATATTAGGAGGCA TAATAAATATAATTTTCATATA TAC TATATAAAAATTATATTTATTG TTAATATTTTAGTTT TERM 1108 839150 - 839190 + F 100 -11.7 -3.89411 | opp_overlap 839150 839154, overlap 839147 839154 839189 TATTAGGAGGCATAA TAAATATAATTTTCATATA TAC TATATAAAAATTATATTTA TTGTTAATATTTTAG TERM 1109 839190 - 839150 - f 100 -13.9 -3.38272 | opp_overlap 839150 839147 839154 839189, overlap 839154 TATTAGGAGGCATAA TAAATATAATTTTCATATA TAC TATATAAAAATTATATTTA TTGTTAATATTTTAG TERM 1110 839154 - 839186 + F 82 -8.1 -4.51224 | opp_overlap 839154 839150, overlap 839150 839147 AGGAGGCATAATAAA TATAATTTTCATATA TAC TATATAAAAATTATA TTTATTGTTAATATT TERM 1111 839186 - 839154 - f 91 -10.3 -4.33819 | opp_overlap 839150 839147 839154, overlap 839150 AGGAGGCATAATAAA TATAATTTTCATATA TAC TATATAAAAATTATA TTTATTGTTAATATT TERM 1112 839675 - 839653 - g 100 -10.6 -4.89852 | overlap 839656 GTAGATTGATAAAAA CTACTCCTTC TAT GAAGGAGAAG TTAAAAGATTATCAT TERM 1113 839672 - 839656 - g 85 -10.9 -3.32986 | overlap 839653 GATTGATAAAAACTA CTCCTTC TAT GAAGGAG AAGTTAAAAGATTAT CKL_0838 839370 - 840332 + | NADH dehydrogenase-related protein CKL_0839 840348 - 841109 + | NADH dehydrogenase-related protein CKL_0840 841145 - 841681 + | hypothetical protein TERM 1114 842357 - 842368 + G 74 -5.8 -4.63542 | opp_overlap 842357 AATCTCCTCAGCAGA TGGC TGGT GCCA TTTTTAAAAGTTATG CKL_0841 841744 - 843117 + | Fe-Fe hydrogenase 2 CKL_0842 843677 - 843955 + | microcompartment shellprotein dhaA 844423 - 846087 + | DhaA dhaC 846190 - 846720 + | DhaC TERM 1115 847652 - 847633 - g 72 -7.2 -3.95324 | overlap 847634 GAGCCTGAAGAAGAA CCAGTTTC AGAA GAAACTGA AAAACCTGAAGAGGA TERM 1116 847651 - 847634 - g 71 -8.5 -2.96712 | overlap 847633 AGCCTGAAGAAGAAC CAGTTTC AGAA GAAACTG AAAAACCTGAAGAGG TERM 1117 847760 - 847741 - g 72 -7.2 -3.95324 | overlap 847742 GAGTCCGAAGAAGAA CCAGTTTC AGAA GAAACTGA AAAACCTGAAGAGGA TERM 1118 847759 - 847742 - g 71 -8.5 -2.96712 | overlap 847741 AGTCCGAAGAAGAAC CAGTTTC AGAA GAAACTG AAAAACCTGAAGAGG TERM 1119 847832 - 847813 - g 74 -9.4 -2.71074 | overlap 847812 GAACCAGAAGAAGAG TCAGTTTC AGAA GAAACTGA GGAATCAAAAGAAGA CKL_0845 847168 - 848259 + | microcompartment shellprotein CKL_0846 848266 - 848928 + | microcompartment protein CKL_0847 848942 - 849940 + | microcompartment protein CKL_0848 850001 - 850951 + | hypothetical protein CKL_0849 850985 - 851266 + | microcompartment shellprotein TERM 1120 852025 - 852048 + G 77 -9 -3.29144 | opp_overlap 852024 852025 CTATTAATGATAAAC CGGTTACATA TAAG TATGTAACTG TTATAGGAGAAGTAG TERM 1121 852097 - 852084 - g 79 -6.7 -4.5442 | CCTTCAATCATAAAA GTTCC AATA GGAAC AAAAGTTATGGAATG CKL_0850 851559 - 852884 + | RnfC related NADH dehydrogenase CKL_0851 852902 - 853450 + | microcompartment shellprotein TERM 1122 853864 - 853874 + G 71 -5.4 -4.56775 | opp_overlap 853859 853872, overlap 853859 AGAAGTTAAATTCTT CAGT AGA ACTG TTTTTAAACAGAAGT TERM 1123 854037 - 854056 + G 71 -8 -3.21395 | overlap 854035 CTTAAGGATGAGCCC GTTACATA CAAA TATGTAAC TGTTGTAGGAGAAGT CKL_0852 853569 - 854897 + | RnfC related NADH dehydrogenase CKL_0853 854915 - 855463 + | microcompartment shellprotein TERM 1124 856000 - 856023 + G 77 -9 -3.29144 | opp_overlap 856000 855999 CTATTAATGATAAAC CGGTTACATA TAAG TATGTAACTG TTATAGGAGAAGTAG TERM 1125 856072 - 856059 - g 79 -6.7 -4.5442 | CCTTCAATCATAAAA GTTCC AATA GGAAC AAAAGTTATGGAATG CKL_0854 855534 - 856859 + | RnfC related NADH dehydrogenase CKL_0855 856877 - 857425 + | microcompartment shellprotein TERM 1126 857940 - 857950 + G 71 -5.4 -4.56775 | opp_overlap 857935 857948, overlap 857935 AGAAGTTAAATTCTT CAGT AGA ACTG TTTTTAAACAGAAGT TERM 1127 858113 - 858132 + G 71 -8 -3.21395 | overlap 858111 CTTAAGGATGAGCCC GTTACATA CAAA TATGTAAC TGTTGTAGGAGAAGT CKL_0856 857645 - 858973 + | RnfC related NADH dehydrogenase CKL_0857 858991 - 859539 + | microcompartment shellprotein TERM 1128 859600 - 859642 + F 100 -19 -4.14511 | opp_overlap 859600 859605, overlap 859605 859627 AGAGAATATTTTAAA TTAAATTCCAGTAAAATGAA CCA TTTATTTTACTGGAATTTAA TTTTGCAGTAAAATT TERM 1129 859642 - 859600 - f 100 -16.8 -3.68662 | opp_overlap 859600 859605 859627, overlap 859605 AGAGAATATTTTAAA TTAAATTCCAGTAAAATGAA CCA TTTATTTTACTGGAATTTAA TTTTGCAGTAAAATT TERM 1130 859605 - 859637 + F 100 -14.5 -4.20806 | opp_overlap 859600 859605, overlap 859600 859627 ATATTTTAAATTAAA TTCCAGTAAAATGAA CCA TTTATTTTACTGGAA TTTAATTTTGCAGTA TERM 1131 859637 - 859605 - f 100 -12.3 -4.07647 | opp_overlap 859605 859600 859627, overlap 859600 ATATTTTAAATTAAA TTCCAGTAAAATGAA CCA TTTATTTTACTGGAA TTTAATTTTGCAGTA TERM 1132 859627 - 859655 + F 72 -3.3 -5.27923 | opp_overlap 859605 859600, overlap 859605 859600 AAAATGAACCATTTA TTTTACTGGAA TTTAATT TTGCAGTAAAA TTTTTTATAAAGTTA pheB 859758 - 860195 + | hypothetical protein TERM 1133 860559 - 860578 + F 100 -7.8 -5.83211 | opp_overlap 860559 GGAATCGCGATAAAA CTCGTCCC ATGT GGGAAGAG TTTTTTGTTTTGATA TERM 1134 860578 - 860559 - f 78 -7.8 -4.4017 | opp_overlap 860559 GGAATCGCGATAAAA CTCGTCCC ATGT GGGAAGAG TTTTTTGTTTTGATA hom1 860648 - 861889 + | Hom1 thrB 862028 - 862930 + | hypothetical protein CKL_0861 863090 - 863602 + | hypothetical protein TERM 1135 864054 - 864043 - g 71 -3 -5.1764 | TAGATAATACAAAAA TAGT ATTT ACTA TACATCAAAATGATT CKL_0862 863661 - 864341 + | hypothetical protein TERM 1136 864376 - 864410 + F 86 -7.2 -5.06505 | opp_overlap 864376 864374 AAATGTGAAAAAGCA TGGCAAGTATAGGAGA TTC TTACTAATACTTGCCA TTTTTATATATAATT TERM 1137 864621 - 864641 + G 75 -4.9 -5.10461 | overlap 864635 TGGAAATAATTTTAG TTTTTTAAG TTT TTTAAAAAA TTTTTATTCAATAGG CKL_0863 864520 - 864780 + | hypothetical protein CKL_0864 864792 - 865370 + | Maf-like protein CKL_0865 865385 - 866071 + | DNA repair protein RadC CKL_0866 866094 - 867104 + | MreB-like protein TERM 1138 867850 - 867822 - g 73 -8.3 -3.43676 | opp_overlap 867811 867821 TTCAGGAATTGATAA TTCCTATCCTAAT GGA ATTAGAATTGGAA CTGTAGTAGATGTGG CKL_0867 867121 - 867981 + | MreC-like protein CKL_0868 867993 - 868484 + | hypothetical protein TERM 1139 869313 - 869329 + G 75 -5.1 -5.05782 | opp_overlap 869313 869316, overlap 869316 AGGTCCTATCCAAAT GGAGAAC TGG GTTCTGC TTTTTTGGGATACAT TERM 1140 870298 - 870288 - g 85 -6.8 -5.10461 | GGCAGTGAAGAAAAA CCTG CTA CAGG CATAGAAATTCCAGA TERM 1141 870511 - 870499 - g 72 -2.7 -5.43974 | opp_overlap 870500, overlap 870500 AAAAGGAAATAAAAA CTTTG ATA CAAAA TTCTATAAAAGGTGG CKL_0869 868524 - 871214 + | penicillin-binding protein 2 TERM 1142 871211 - 871267 + F 100 -15 -3.33129 | gap 1, opp_overlap 871215 871218 871220, overlap 871220 871222 871226 TTCAGATGCCGGTGA ATAACAGTATATGAATTTGCGAATAGA TTAA TCTATTCGCAAATTCATATA-TGATAA TTAATGTAGTATTAT TERM 1143 871263 - 871215 - f 100 -20.2 -3.61715 | gap 1, opp_overlap 871211 871220 871222 871226, overlap 871218 871220 GATGCCGGTGAATAA CAGTATATGAATTTGCGAATAGA TTAA TCTATTCGCAAATTCATATA-TG ATAATTAATGTAGTA TERM 1144 871261 - 871218 - f 100 -23 -2.63073 | opp_overlap 871211 871220 871222 871226, overlap 871215 871220 GCCGGTGAATAACAG TATATGAATTTGCGAATAGA TTAA TCTATTCGCAAATTCATATA TGATAATTAATGTAG TERM 1145 871259 - 871220 - f 100 -21.2 -2.85545 | opp_overlap 871211 871220 871222 871226, overlap 871218 871215 CGGTGAATAACAGTA TATGAATTTGCGAATAGA TTAA TCTATTCGCAAATTCATA TATGATAATTAATGT TERM 1146 871220 - 871259 + F 100 -21.2 -2.87404 | opp_overlap 871220 871218 871215, overlap 871211 871222 871226 CGGTGAATAACAGTA TATGAATTTGCGAATAGA TTAA TCTATTCGCAAATTCATA TATGATAATTAATGT TERM 1147 871222 - 871257 + F 100 -19.4 -2.98282 | opp_overlap 871220 871218 871215, overlap 871220 871211 871226 GTGAATAACAGTATA TGAATTTGCGAATAGA TTAA TCTATTCGCAAATTCA TATATGATAATTAAT TERM 1148 871226 - 871253 + F 100 -14.4 -3.34088 | opp_overlap 871220 871218 871215, overlap 871222 871220 871211 ATAACAGTATATGAA TTTGCGAATAGA TTAA TCTATTCGCAAA TTCATATATGATAAT TERM 1149 871638 - 871624 - g 88 -7.2 -5.08367 | AATATAAATGAAAAA CAATCT GTA AGATTG AAACAGGTGTTATTT minC 871438 - 872067 + | septum formation inhibitor minD 872082 - 872879 + | hypothetical protein minE 872893 - 873159 + | hypothetical protein TERM 1150 873159 - 873177 + F 95 -6 -5.83211 | opp_overlap 873147 TAAGTATAATAAATA GCTGTGTA TTA TACATGGC TTTTTTATTTTGCTG rodA 873229 - 874353 + | RodA TERM 1151 874397 - 874452 + F 84 -11.1 -2.70143 | opp_overlap 874398 874404 874406, overlap 874397 874406 874413 TATGATAAATATATA TTTTAAAGAGACTTTATAAAATT TTTATTTTTT AATTTTATAAAGTCTTTTTAAAG TAGTATGCTTGGGCT TERM 1152 874451 - 874398 - f 78 -10.2 -2.53921 | opp_overlap 874397 874397 874406 874413, overlap 874404 874406 ATGATAAATATATAT TTTAAAGAGACTTTATAAAATT TTTATTTTTT AATTTTATAAAGTCTTTTTAAA GTAGTATGCTTGGGC TERM 1153 874406 - 874443 + F 81 -7.4 -4.63928 | opp_overlap 874404 874398 874406, overlap 874397 874397 874413 TATATATTTTAAAGA GACTTTATAAAATT TTTATTTTTT AATTTTATAAAGTC TTTTTAAAGTAGTAT TERM 1154 874413 - 874423 + F 71 -2.6 -5.50313 | opp_overlap 874406 874404 874398, overlap 874397 874406 874397 TTTAAAGAGACTTTA TAAA ATT TTTA TTTTTTAATTTTATA CKL_0874 874548 - 874913 + | endopeptidase CKL_0875 874932 - 875777 + | stage IV sporulation protein FB TERM 1155 875779 - 875807 + F 76 -4 -5.42265 | gap 1, opp_overlap 875779 AGTTGAATCGATAGA GTACAGCATGC TTCTTTTT GCAT-CTGTAC TTTTTTGTAATTTAA TERM 1156 875832 - 875851 + F 71 -4.4 -4.87318 | gap 1, opp_overlap 875836, overlap 875836 ATTTAAGTAAATTTA CAGATGATA ATA TATCA-CTG TTTTTGCATTTTAAA CKL_0876 875920 - 877773 + | hypothetical protein CKL_0877 877742 - 878458 + | hypothetical protein TERM 1157 878536 - 878517 - g 77 -8 -3.82628 | opp_overlap 878516 878515, overlap 878515 TATTTGAAAGAAATA TTTGTTGA AAGA TCAACAAA AGTTTTAAGGATAAT TERM 1158 879022 - 879006 - g 83 -6.7 -4.83759 | AATGAAATGGAAAAA CTATATA AAG TATATAG TCAGGTAATTAAATC TERM 1159 879264 - 879233 - g 74 -3.2 -5.35815 | gap 1, overlap 879234 879235 CACAGGAAATAAAAA TC-TATTTTCCTATT ATG AACTGGAAAATAAGA TATTAAATTTGAGAA rne 878505 - 879941 + | Rne rplU 880072 - 880383 + | 50S ribosomal protein L21 CKL_0880 880387 - 880716 + | hypothetical protein TERM 1160 880809 - 880795 - g 72 -8.6 -3.17797 | GGTAGAGATAGTGAA TCCAAG AGA CTTGGA ACTAAATCAGCTGAT rpmA 880720 - 881022 + | 50S ribosomal protein L27 TERM 1161 881034 - 881053 + F 100 -9.3 -5.04385 | ATAGTTGTTATTGAG GCACCCT GACAAA AGGGTGC TTTTTTGAAAATATG CKL_0882 881248 - 882522 + | GTPase ObgE nadD 882537 - 883148 + | nicotinic acid mononucleotide adenylyltransferase CKL_0884 883182 - 883757 + | hydrolase TERM 1162 883842 - 883830 - g 76 -3.3 -5.4111 | opp_overlap 883837, overlap 883831 AATAAGTACAAAAAA GGCTC CTG GAGCT GTAGGTCCTTATTCA CKL_0885 883801 - 884181 + | hypothetical protein TERM 1163 884226 - 884200 - f 74 -8 -3.6135 | opp_overlap 884195, overlap 884219 AAAGATAGGTTTAAA GGAGTGAGCTTT AAA AGAGTTCACTCC TAATAATTTAACAGG rluD1 884253 - 885152 + | RluD1 dacA1 886427 - 885204 - | DacA1 TERM 1164 885815 - 885827 + g 80 -7.7 -4.24342 | CATTCCATACGCCTC TCTCC TTG GGAGA TTTATTGGTAGGAGG TERM 1165 886159 - 886173 + g 76 -6.4 -4.59511 | CCTATTCTAGTTCCA TCTACC AGA GGTGGA TTTTTACCAACTGTT CKL_0888 886674 - 887276 + | DNA-binding competence protein TERM 1166 887722 - 887712 - g 86 -4 -5.72622 | opp_overlap 887712 TCTATAAATAAAAAA TTTG ATA CAAA TTTTACAAAAGATAA aspC1 887442 - 888632 + | aspartate aminotransferase CKL_0890 888684 - 889595 + | permease CKL_0891 889788 - 892376 + | cation-transporting ATPase TERM 1167 892521 - 892535 + G 100 -7.8 -5.33131 | ATAACATTTTTATAG CAGCGG TGC TCGCTG TTTCTTTTTTTATTA TERM 1168 892564 - 892576 + G 72 -4.9 -4.90471 | TATGGTATTATTGAC TTTAG AAA CTAAA TTTTGTATTTTAAAT TERM 1169 892812 - 892830 + G 78 -9 -3.55071 | CTTATATAGACAGGG GTATAGTT GGA AACTATAC TTTAGAACAATATAA comE 892418 - 894223 + | ComE CKL_0893 894262 - 895296 + | DNA polymerase III subunit delta TERM 1170 895339 - 895284 - T 90 -9.5 -4.45068 | gap 2, opp_overlap 895286 895287 895289 895304, overlap 895286 895289 895291 ACTTTTAATAATAAA TACT-ACAGCATAATAAAT-AACCGGC AAGT ACCGGTTTATTTATTATGCTGTCAATT TATTTAATTTCAAAG TERM 1171 895286 - 895337 + T 88 -9.2 -4.62772 | gap 2, opp_overlap 895286 895284 895289 895291, overlap 895287 895289 895304 TTTTAATAATAAATA CT-ACAGCATAATAAAT-AACCGG CAAGTA CCGGTTTATTTATTATGCTGTCAA TTTATTTAATTTCAA TERM 1172 895336 - 895286 - T 100 -13.7 -3.82963 | gap 1, opp_overlap 895286 895287 895289 895304, overlap 895284 895289 895291 TTTTAATAATAAATA CTACAGCATAATAAAT-AACCGGC AAGT ACCGGTTTATTTATTATGCTGTCA ATTTATTTAATTTCA TERM 1173 895287 - 895336 + T 100 -12.7 -3.36578 | gap 2, opp_overlap 895286 895284 895289 895291, overlap 895286 895289 895304 TTTAATAATAAATAC T-ACAGCATAATAAAT-AACCGG CAAGTA CCGGTTTATTTATTATGCTGTCA ATTTATTTAATTTCA TERM 1174 895333 - 895289 - T 100 -17.6 -2.98354 | gap 1, opp_overlap 895289 895287 895286 895304, overlap 895286 895284 895291 TAATAATAAATACTA CAGCATAATAAAT-AACCGGC AAGT ACCGGTTTATTTATTATGCTG TCAATTTATTTAATT TERM 1175 895289 - 895333 + T 100 -16.9 -2.82263 | gap 1, opp_overlap 895286 895284 895289 895291, overlap 895287 895286 895304 TAATAATAAATACTA CAGCATAATAAAT-AACCGG CAAGTA CCGGTTTATTTATTATGCTG TCAATTTATTTAATT TERM 1176 895331 - 895291 - T 100 -14.4 -3.02508 | gap 1, opp_overlap 895289 895287 895286 895304, overlap 895289 895286 895284 ATAATAAATACTACA GCATAATAAAT-AACCGGC AAGT ACCGGTTTATTTATTATGC TGTCAATTTATTTAA TERM 1177 895304 - 895317 + T 73 -5.2 -4.7458 | opp_overlap 895291 895289 895286 895284, overlap 895289 895287 895286 CAGCATAATAAATAA CCGG CAAGTA CCGG TTTATTTATTATGCT CKL_0894 895592 - 895326 - | 30S ribosomal protein S20 gpr 895891 - 896865 + | germination protease TERM 1178 897783 - 897773 - g 93 -6.8 -5.34555 | opp_overlap 897773 GTAGAGGATAAAAAA GCAG TGA CTGC TAGATTGAATGGAGA CKL_0896 896987 - 898075 + | stage II sporulation protein P CKL_0897 898146 - 898469 + | hypothetical protein TERM 1179 899039 - 899023 - g 74 -8.7 -3.22114 | opp_overlap 899023 899021, overlap 899021 GATATTATAGGAATA GAGGCTT CTG AAGCCCC TCTTGTTTCAGCAAA TERM 1180 899125 - 899102 - g 72 -6 -4.42619 | overlap 899104 899105 CAATAGTGGATAAAA TACCATCTCC ACAG GGAGATGAGA ATGCACCTTTAAAAG TERM 1181 899123 - 899104 - g 79 -8.6 -3.81279 | overlap 899102 899105 ATAGTGGATAAAATA CCATCTCC ACAG GGAGATGA GAATGCACCTTTAAA TERM 1182 899122 - 899105 - g 79 -9.9 -2.88044 | overlap 899104 899102 TAGTGGATAAAATAC CATCTCC ACAG GGAGATG AGAATGCACCTTTAA lepA 898549 - 900357 + | GTP-binding protein LepA TERM 1183 900562 - 900583 + G 100 -10.9 -4.35044 | opp_overlap 900553 900558 TAGACACTATATTTA TAGGTGGGG GAAC TCCCACCTA TTTATCTTTAGATGC CKL_0899 900369 - 901520 + | coproporphyrinogen III oxidase hrcA 901711 - 902751 + | heat-inducible transcription repressor TERM 1184 903099 - 903089 - g 77 -4 -5.46698 | opp_overlap 903089, overlap 903081 903097 CTGAAAATGAAAAAA TTCA TAA TGAA TTTAAAACTCTGCAG grpE 902854 - 903507 + | hypothetical protein dnaK5 903591 - 905447 + | molecular chaperone DnaK TERM 1185 905524 - 905494 - f 78 -9.8 -2.75496 | opp_overlap 905494, overlap 905493 905491 GTATAATAATAATAG TTAAGGGATGAGTT TTT AGCTCTTCCCTTAA TTTAAGTAGAAATTG TERM 1186 905494 - 905524 + F 95 -12 -3.65827 | opp_overlap 905494 905493 905491 GTATAATAATAATAG TTAAGGGATGAGTT TTT AGCTCTTCCCTTAA TTTAAGTAGAAATTG dnaJ 905579 - 906718 + | hypothetical protein TERM 1187 906787 - 906736 - f 100 -14.9 -3.68359 | opp_overlap 906739 906744, overlap 906739 906744 TTTTCAAAATTATAA TAAGTAAATATACTGACAGTTTT CATATT ATAACTGTCAGTATATTTGCTTA TGTAGGAGGAAGCAT TERM 1188 906784 - 906739 - f 100 -12.2 -3.96497 | opp_overlap 906739 906744, overlap 906736 906744 TCAAAATTATAATAA GTAAATATACTGACAGTTTT CATATT ATAACTGTCAGTATATTTGC TTATGTAGGAGGAAG TERM 1189 906739 - 906784 + F 100 -14.4 -3.48276 | opp_overlap 906739 906736 906744, overlap 906744 TCAAAATTATAATAA GTAAATATACTGACAGTTTT CATATT ATAACTGTCAGTATATTTGC TTATGTAGGAGGAAG TERM 1190 906744 - 906779 + F 95 -10.7 -4.04174 | opp_overlap 906744 906739 906736, overlap 906739 ATTATAATAAGTAAA TATACTGACAGTTTT CATATT ATAACTGTCAGTATA TTTGCTTATGTAGGA TERM 1191 906779 - 906744 - f 95 -10.7 -4.12267 | opp_overlap 906739 906744, overlap 906739 906736 ATTATAATAAGTAAA TATACTGACAGTTTT CATATT ATAACTGTCAGTATA TTTGCTTATGTAGGA prmA 906803 - 907741 + | ribosomal protein L11 methyltransferase CKL_0905 907769 - 908524 + | hypothetical protein TERM 1192 908621 - 908604 - f 100 -11.3 -5.94713 | opp_overlap 908604 ATGGTAGAAAAAAAA GAGTGGC TATG GCCACTC TTGGATGTAGAGTAA TERM 1193 908604 - 908621 + F 91 -11.3 -3.12999 | opp_overlap 908604 ATGGTAGAAAAAAAA GAGTGGC TATG GCCACTC TTGGATGTAGAGTAA TERM 1194 909052 - 909042 - g 71 -5.4 -4.60487 | opp_overlap 909042 GAGCATTTTTAAAAA TCCA AGA TGGA TGTAATAGGTTTTGT CKL_0906 908612 - 909916 + | oxidoreductase CKL_0907 909976 - 910320 + | HIT family protein rpsU 910469 - 910645 + | 30S ribosomal protein S21 TERM 1195 910914 - 910893 - g 86 -5.9 -5.38326 | overlap 910887 TTAAGTAAAGAAAAA CTTTCCGAA ATCT TTAGGAAAG CAGTTGACAAGATGG CKL_0909 910674 - 910979 + | hypothetical protein TERM 1196 911089 - 911032 - f 84 -5.9 -5.32699 | opp_overlap 911044 911052, overlap 911034 TCAAATAGTAAAAAA TATTTAAATAAATATAAGAAGCTGGGA GTTA TCTCAGCTTTTTTTATTTATCCAAAAA TTACATGATTAAGGA TERM 1197 911087 - 911034 - f 83 -8.5 -4.27753 | opp_overlap 911044 911052, overlap 911032 AAATAGTAAAAAATA TTTAAATAAATATAAGAAGCTGGGA GTTA TCTCAGCTTTTTTTATTTATCCAAA AATTACATGATTAAG TERM 1198 911044 - 911077 + F 76 -8.3 -3.86822 | opp_overlap 911034 911032, overlap 911052 AAATATTTAAATAAA TATAAGAAGCTGGGA GTTA TCTCAGCTTTTTTTA TTTATCCAAAAATTA TERM 1199 911052 - 911069 + F 100 -7.7 -6.02919 | opp_overlap 911034 911032, overlap 911044 AAATAAATATAAGAA GCTGGGA GTTA TCTCAGC TTTTTTTATTTATCC CKL_0910 911223 - 911504 + | hypothetical protein TERM 1200 911905 - 911895 - g 72 -2.6 -5.39221 | ACAACAATTAAAAAA TTAT GGA ATAA AACCGGGGATAAATA CKL_0911 911491 - 912660 + | hypothetical protein CKL_0912 912699 - 914825 + | membrane-associated hydrolase CKL_0913 914822 - 915316 + | putative metalloprotease TERM 1201 915546 - 915529 - g 70 -7.1 -3.63991 | opp_overlap 915529 915532, overlap 915532 TACTAGCTGTAATAA TAACCAT AAGC ATGGTTA TTATGGCTGAACTCT CKL_0914 915363 - 916061 + | diacylglycerol kinase cdd 916107 - 916523 + | cytidine deaminase CKL_0916 916516 - 917397 + | GTP-binding protein Era TERM 1202 918166 - 918150 - g 70 -8.1 -3.08508 | opp_overlap 918150 918149 918161, overlap 918161 TATTTCTCAAAATTA TTTTAGG AAA CCTAAAA GTTTAGATATTTTAA recO 917443 - 918216 + | DNA repair protein RecO TERM 1203 918381 - 918371 - g 90 -4 -5.92399 | opp_overlap 918371 GAACAAAATAAAAAA TCTT ATA AAGA TAATTTGTATACAAC CKL_0918 918233 - 918832 + | hypothetical protein CKL_0919 919068 - 919712 + | transcriptional regulator ppdK 919792 - 922434 + | pyruvate phosphate dikinase TERM 1204 922508 - 922557 + F 82 -8.3 -4.49389 | gap 1, overlap 922555 ATATTGTAAGAGTTA TAGGGTATTGAAACTTTAAATTAG TAG TTAATTTT-AGTTTCAATGCTCTA TTTTAGTTGTAAAGT CKL_0921 922813 - 923004 + | hypothetical protein TERM 1205 923379 - 923365 - g 74 -8.6 -3.28269 | AAGGTGCAAATGCAA GTTCTG TAG CAGAAC AAACCATCCTCCTTA gyaR 923061 - 924050 + | GyaR CKL_0923 925225 - 924359 - | transcriptional regulator proB2 925352 - 926158 + | ProB2 CKL_0925 926329 - 928374 + | enoate reductase TERM 1206 928430 - 928382 - T 71 -7.2 -3.88603 | gap 1, opp_overlap 928382 928382 928379 928389, overlap 928383 928389 ATCTATAAAAATTAA TCTAAAATATACTATAGATAATA TTAA TTTTA-CTATAGTATATTTTAGC ATTGTATATTTAAAG TERM 1207 928429 - 928383 - T 86 -10.7 -2.92077 | gap 1, opp_overlap 928382 928382 928379 928389, overlap 928382 928389 TCTATAAAAATTAAT CTAAAATATACTATAGATAATA TTAA TTTTA-CTATAGTATATTTTAG CATTGTATATTTAAA CKL_0926 929336 - 928674 - | hypothetical protein TERM 1208 929110 - 929126 + g 100 -9.5 -5.51046 | GATAATCTATATTTA CTAGGTA CTT TACCTAG TTTTTTATATATTTC CKL_0927 930070 - 929558 - | hypothetical protein TERM 1209 930125 - 930099 - R 80 -5.3 -5.243 | opp_overlap 930121, overlap 930103 TAAACTATTAAAAAA TAAAGAACTAT TAAAC ATAGTTCTATA AATATTATTATAGTT TERM 1210 930121 - 930103 - R 82 -6.1 -5.0917 | overlap 930099 CTATTAAAAAATAAA GAACTAT TAAAC ATAGTTC TATAAATATTATTAT CKL_0928 930894 - 930169 - | transcriptional regulator TERM 1211 930367 - 930377 + g 74 -4 -5.26119 | TATGTAGTCAACAGG TGAA ACT TTCA TTTTATTTTTAAACC CKL_0929 931635 - 932369 + | ATP-binding protein CKL_0930 932473 - 933102 + | methyltransferase CKL_0931 933219 - 933755 + | acetyltransferase CKL_0932 933800 - 934585 + | epimerase TERM 1212 934635 - 934652 + F 70 -2 -5.48213 | CTTATGTGTCACAAA GACTTA TTAACT TAGGTC TTTTTATTTTGACTA CKL_0933 934723 - 935412 + | anaerobic sulfite reductase-related protein TERM 1213 935429 - 935444 + T 100 -10.4 -5.13473 | opp_overlap 935429 AGATGAGCTGAGGAA CGGGCA TTAG TGCCCG TTTTTTAACTATAAT TERM 1214 935444 - 935429 - T 86 -10.4 -3.1739 | opp_overlap 935429 AGATGAGCTGAGGAA CGGGCA TTAG TGCCCG TTTTTTAACTATAAT CKL_0934 936223 - 935528 - | transcriptional regulator TERM 1215 936150 - 936198 + g 71 -6.6 -3.99985 | opp_overlap 936150 936158 936182, overlap 936155 936158 936179 AAGCATTGTAACAAG TAAAAGAGTTCTTCTTT-TTTTAT GCC GTAAAATAAAGGAGAA-TCTTTTA TTATTTCAATATATG CKL_0935 936340 - 938043 + | hydroxylamine reductase TERM 1216 938150 - 938168 + F 73 -3.1 -5.5074 | CCTGGTTTATAAAAA GATTGGT GAGGA GCCAGTC TTTTTTGTTGCGTTA TERM 1217 938945 - 938958 + G 80 -5.3 -5.14698 | ATAATTTATATTTAG GGAAA AACA TTTCC TTTTATTTTGCATTT CKL_0936 938530 - 939087 + | biotin synthesis protein bioB1 939141 - 939866 + | dithiobiotin synthetase TERM 1218 940551 - 940535 - g 82 -9.5 -3.62522 | TAAGTGCTGTAATAA TTGAACC AAT GGTTCAA GGAGCTGCAGGTATG bioA 939886 - 941241 + | hypothetical protein TERM 1219 941286 - 941331 + T 95 -11.3 -4.38154 | opp_overlap 941292 941294, overlap 941294 TTTTAAATCACTGCC TAATAATACCGACCTCTTCCT ATCT ATGAAGAGGTCGGTTTAGTTA TTTTATAAAAGGTAT TERM 1220 941325 - 941292 - T 95 -12.5 -3.62775 | opp_overlap 941286 941294, overlap 941294 ATCACTGCCTAATAA TACCGACCTCTTCCT ATCT ATGAAGAGGTCGGTT TAGTTATTTTATAAA TERM 1221 941323 - 941294 - T 100 -15.1 -3.39288 | opp_overlap 941286 941294, overlap 941292 CACTGCCTAATAATA CCGACCTCTTCCT ATCT ATGAAGAGGTCGG TTTAGTTATTTTATA TERM 1222 941294 - 941323 + T 100 -15.1 -4.23244 | opp_overlap 941294 941292, overlap 941286 CACTGCCTAATAATA CCGACCTCTTCCT ATCT ATGAAGAGGTCGG TTTAGTTATTTTATA cotS1 942412 - 941372 - | CotS1 CKL_0940 942526 - 943551 + | deoxyguanosinetriphosphate triphosphohydrolase-like protein TERM 1223 943621 - 943654 + F 95 -11.5 -4.07687 | opp_overlap 943621 943625 943628, overlap 943614 943625 AATTTATATATTAGA TAAATAATTAATTTA ATAT TAAATTAATTATTTA TTTTCACAGAAGGAT TERM 1224 943654 - 943621 - f 89 -11.5 -2.89743 | opp_overlap 943614 943621 943625, overlap 943625 943628 AATTTATATATTAGA TAAATAATTAATTTA ATAT TAAATTAATTATTTA TTTTCACAGAAGGAT TERM 1225 943625 - 943650 + F 83 -7.9 -4.64861 | opp_overlap 943621 943625 943628, overlap 943614 943621 TATATATTAGATAAA TAATTAATTTA ATAT TAAATTAATTA TTTATTTTCACAGAA TERM 1226 943650 - 943625 - f 77 -7.9 -4.12475 | opp_overlap 943614 943625 943621, overlap 943621 943628 TATATATTAGATAAA TAATTAATTTA ATAT TAAATTAATTA TTTATTTTCACAGAA TERM 1227 943719 - 943676 - f 74 -8.6 -3.16981 | opp_overlap 943686 943689, overlap 943686 943689 CAGAAGGATATTTAA TTTTTATAAAGAATATATTA TATA TAATATATTCTTATTAAAAA AAGAAAAATATTTAT TERM 1228 943686 - 943709 + F 76 -8.4 -3.61398 | opp_overlap 943676 943686 943689, overlap 943689 TTTAATTTTTATAAA GAATATATTA TATA TAATATATTC TTATTAAAAAAAGAA TERM 1229 943709 - 943686 - f 80 -8.4 -3.89614 | opp_overlap 943686 943689, overlap 943676 943689 TTTAATTTTTATAAA GAATATATTA TATA TAATATATTC TTATTAAAAAAAGAA TERM 1230 945279 - 945266 - g 75 -2.5 -5.68039 | AAAGTCATAAAAAAA TATAT GAAT ATATA ATTGAAAATATGAAG dnaG 943813 - 945585 + | DNA primase TERM 1231 945979 - 945966 - g 74 -5.3 -4.86385 | opp_overlap 945966 ATTGCCAAAAAGAAA TTAGC AGAA GCTAA TTTAAGACTAGTAGT rpoD2 945606 - 946670 + | hypothetical protein TERM 1232 946672 - 946689 + F 70 -5.5 -4.61199 | opp_overlap 946672, overlap 946667 ATTATCTAGATTAAA GCACCAT TTGC AGGGTGC TTTTATATATAGGAT CKL_0943 946765 - 947652 + | hypothetical protein TERM 1233 947764 - 947748 - g 71 -8 -3.31515 | AAATATGGTGGATAA CTGCCA ATGTA TGGCAG ATATAGGAACAGATC TERM 1234 948033 - 948013 - g 71 -6.9 -4.02093 | overlap 948015 GACATAATAGAAGAA GATCTTGAA GTG TTCAAGAGC GCAAAATCATTAATT TERM 1235 948031 - 948015 - g 75 -8.1 -3.58527 | overlap 948013 CATAATAGAAGAAGA TCTTGAA GTG TTCAAGA GCGCAAAATCATTAA CKL_0944 947701 - 948390 + | hypothetical protein CKL_0945 948381 - 949196 + | hypothetical protein TERM 1236 949193 - 949220 + F 86 -5.7 -5.40004 | opp_overlap 949193 949196 TCCGTATAAATATAA GTAGAAATGAG GGTGAG TTCATTTCTGC TTTTTTAATTTAGTA CKL_0946 949286 - 949996 + | hypothetical protein TERM 1237 950453 - 950485 + F 91 -10.1 -4.37502 | opp_overlap 950459, overlap 950459 GACTTACTTACCCAT TGAAAACACTAGGTT TCA GACTTAGTGTTTTTA TTTTGCTATACTAAT TERM 1238 950459 - 950479 + F 91 -6.9 -5.52079 | opp_overlap 950459, overlap 950453 CTTACCCATTGAAAA CACTAGGTT TCA GACTTAGTG TTTTTATTTTGCTAT CKL_0947 950785 - 951096 + | hypothetical protein feoB1 953339 - 951222 - | FeoB1 feoA 953629 - 953351 - | hypothetical protein CKL_0950 953894 - 954292 + | hypothetical protein TERM 1239 954447 - 954396 - T 100 -12 -4.88405 | opp_overlap 954407 954410 954415, overlap 954398 954401 954415 AATTGGCAAATAAAA GATTATGTAAATAATAAAAGAGCA AAAA TGCTCTTTTATTATTTACAAAAGT AGAAAGATTATATAT TERM 1240 954445 - 954398 - T 100 -19 -4.05678 | opp_overlap 954407 954410 954415, overlap 954396 954401 954415 TTGGCAAATAAAAGA TTATGTAAATAATAAAAGAGCA AAAA TGCTCTTTTATTATTTACAAAA GTAGAAAGATTATAT TERM 1241 954442 - 954401 - T 100 -20.7 -3.05714 | opp_overlap 954407 954410 954415, overlap 954398 954396 954415 GCAAATAAAAGATTA TGTAAATAATAAAAGAGCA AAAA TGCTCTTTTATTATTTACA AAAGTAGAAAGATTA TERM 1242 954407 - 954436 + T 100 -13.9 -3.54424 | opp_overlap 954401 954398 954396 954415, overlap 954410 954415 AAAAGATTATGTAAA TAATAAAAGAGCA AAAA TGCTCTTTTATTA TTTACAAAAGTAGAA TERM 1243 954410 - 954433 + T 95 -11.2 -3.9122 | opp_overlap 954401 954398 954396 954415, overlap 954407 954415 AGATTATGTAAATAA TAAAAGAGCA AAAA TGCTCTTTTA TTATTTACAAAAGTA TERM 1244 954428 - 954415 - T 84 -6.7 -5.011 | opp_overlap 954410 954407 954415, overlap 954401 954398 954396 ATGTAAATAATAAAA GAGCA AAAA TGCTC TTTTATTATTTACAA TERM 1245 954415 - 954428 + T 83 -6.7 -5.00196 | opp_overlap 954415 954401 954398 954396, overlap 954410 954407 ATGTAAATAATAAAA GAGCA AAAA TGCTC TTTTATTATTTACAA CKL_0951 954843 - 954541 - | hypothetical protein TERM 1246 954957 - 954983 + H 70 -7.6 -3.40593 | opp_overlap 954962, overlap 954954 954962 ATAATTACAATTTGA TAGAATAAAAAA CTG TTTTTTATTTTA TTAGTATATTATGAT TERM 1247 954962 - 954978 + H 73 -5.3 -4.77983 | opp_overlap 954962, overlap 954957 954954 TACAATTTGATAGAA TAAAAAA CTG TTTTTTA TTTTATTAGTATATT TERM 1248 956110 - 956091 - H 71 -7.8 -3.64371 | gap 1, overlap 956093 AAGTGAGATGTGAAA GACCCGGGC TTA ACCCGGG-C AGTGCATTTCAAACT TERM 1249 956109 - 956093 - H 93 -11.5 -3.39844 | overlap 956091 GTGAGATGTGAAAGA CCCGGGC TTA ACCCGGG CAGTGCATTTCAAAC TERM 1250 957005 - 956986 - H 73 -9.2 -2.65808 | opp_overlap 956989 956992, overlap 956983 956998 AGTCGTAACAAGGTA GCCGTAGG AGAA CCTGCGGC TGGATCACCTCCTTT TERM 1251 957215 - 957233 + H 70 -7.6 -3.3514 | opp_overlap 957215 957219 CAAGTACAAGAAAAA TTTACAAT TTA ATTGTAAA TTGTGCACTGTGAAT TERM 1252 957233 - 957215 - H 91 -7.6 -5.24416 | opp_overlap 957215, overlap 957219 CAAGTACAAGAAAAA TTTACAAT TTA ATTGTAAA TTGTGCACTGTGAAT TERM 1253 957335 - 957358 + H 72 -6.2 -4.27617 | AACCTTTGTAGTGGA TAAGTATAAA TGAG TTTATGCTTA TTTTAATAAGATGTA TERM 1254 957580 - 957558 - H 80 -8.5 -3.90856 | gap 1, opp_overlap 957553, overlap 957562 AATTTTTTAATGAAA CTCACTCAGC TAAG GCTGAG-GAG TGCAATTTAGGCACC TERM 1255 957577 - 957562 - H 73 -9 -2.70979 | opp_overlap 957553, overlap 957558 TTTTAATGAAACTCA CTCAGC TAAG GCTGAG GAGTGCAATTTAGGC TERM 1256 957912 - 957895 - H 86 -9.9 -3.695 | GGGAAAGAGCCCAAA CCGGAAA CTTG TTTCCGG GGTAGAGGTCAGGTG TERM 1257 958078 - 958063 - H 81 -10.4 -2.71011 | ACCTTGTGGGAAGCA GGGAGG ACCA CCTCCC AAGGCTAAATACTAC TERM 1258 958152 - 958141 - H 75 -7.2 -4.2354 | GAAAGGTGAAAAGAA CCCC GGGA GGGG AGTGAAATAGAACCT TERM 1259 958205 - 958218 + H 71 -4.5 -4.82901 | opp_overlap 958205 TCGAAGTACGTTAAA GTACG ACGG CGTGC TTTTTGTAGAACGAG TERM 1260 960801 - 960783 - H 100 -10.4 -4.72272 | opp_overlap 960783 TCTGGCCACCAAAAA CTTCAGAT AAA ATCTGAAG TTTTTTTATGTATAA TERM 1261 960783 - 960801 + H 100 -10.4 -5.76633 | opp_overlap 960783 TCTGGCCACCAAAAA CTTCAGAT AAA ATCTGAAG TTTTTTTATGTATAA folP 960928 - 961743 + | hypothetical protein TERM 1262 961799 - 961829 + F 83 -8.5 -4.28188 | opp_overlap 961801, overlap 961801 TATTTTAAGGAGGTA AATATTGAGTATG TTTTT CATACTCAATATG TTTGTATTATGGATG TERM 1263 961827 - 961801 - f 93 -11.1 -3.71527 | opp_overlap 961799 961801 TTTTAAGGAGGTAAA TATTGAGTATG TTTTT CATACTCAATA TGTTTGTATTATGGA TERM 1264 961801 - 961827 + F 93 -11.1 -3.73486 | opp_overlap 961801, overlap 961799 TTTTAAGGAGGTAAA TATTGAGTATG TTTTT CATACTCAATA TGTTTGTATTATGGA folE 961838 - 962395 + | GTP cyclohydrolase I TERM 1265 962466 - 962447 - g 83 -8 -4.2408 | TTAGAAAATCAGAAA TTTTGTAG ATAT CTACAAAA AAACTTTCAAATAGA CKL_0959 962411 - 962887 + | hydrolase CKL_0960 962915 - 963805 + | bifunctional folate synthesis protein CKL_0961 965080 - 963833 - | hypothetical protein TERM 1266 964318 - 964338 + g 77 -4.1 -5.46657 | overlap 964320 CATCTTCTTGACATT TATTGTATT TAA AATACAAGA TTTTTTCTTCGGATA CKL_0962 965839 - 965111 - | transporter protein CKL_0963 966710 - 965961 - | ABC transporter permease CKL_0964 967622 - 966711 - | ABC transporter ATPase TERM 1267 967220 - 967236 + g 76 -3.7 -5.45802 | TTTGCTTCATGCCAA GGGAAAA TTC TTTTACC TTTTTATTTTCCACA TERM 1268 967702 - 967675 - R 76 -4.4 -5.37043 | gap 1 ATTTTACATAAAAAA GGACTATATT-TA TAA TACAATATAATCC TTACAAGCTATTTAC CKL_0965 968654 - 967725 - | two component sensor kinase CKL_0966 969348 - 968656 - | transcriptional regulator TERM 1269 968712 - 968726 + g 75 -5 -5.0065 | TATATTTAGGGTTGT TTGGAG TAT CTTCAA TTTTATTTCTCAGTC TERM 1270 970596 - 970577 - R 71 -7.8 -3.64371 | gap 1, overlap 970579 AAGTGAGATGTGAAA GACCCGGGC TTA ACCCGGG-C AGTGCATTTCAAACT TERM 1271 970595 - 970579 - R 93 -11.5 -3.39844 | overlap 970577 GTGAGATGTGAAAGA CCCGGGC TTA ACCCGGG CAGTGCATTTCAAAC TERM 1272 971491 - 971472 - R 73 -9.2 -2.65808 | opp_overlap 971475 971478, overlap 971469 971484 AGTCGTAACAAGGTA GCCGTAGG AGAA CCTGCGGC TGGATCACCTCCTTT TERM 1273 971550 - 971534 - R 73 -4.3 -5.01732 | overlap 971521 AAGGCTGGGAAAAAA CCTGCCT TAA AAGCTGG AATTTGAGATAAATA TERM 1274 971774 - 971797 + r 72 -6.2 -4.27617 | overlap 971796 AACCTTTGTAGTGGA TAAGTATAAA TGAG TTTATGCTTA TTTTAATAAGATATA TERM 1275 972019 - 971997 - R 80 -8.5 -3.90856 | gap 1, opp_overlap 971992, overlap 972001 AATTTTTTAATGAAA CTCACTCAGC TAAG GCTGAG-GAG TGCAATTTAGGCACC TERM 1276 972016 - 972001 - R 73 -9 -2.70979 | opp_overlap 971992, overlap 971997 TTTTAATGAAACTCA CTCAGC TAAG GCTGAG GAGTGCAATTTAGGC TERM 1277 972351 - 972334 - R 86 -9.9 -3.695 | GGGAAAGAGCCCAAA CCGGAAA CTTG TTTCCGG GGTAGAGGTCAGGTG TERM 1278 972517 - 972502 - R 81 -10.4 -2.71011 | ACCTTGTGGGAAGCA GGGAGG ACCA CCTCCC AAGGCTAAATACTAC TERM 1279 972591 - 972580 - R 75 -7.2 -4.2354 | GAAAGGTGAAAAGAA CCCC GGGA GGGG AGTGAAATAGAACCT TERM 1280 972644 - 972657 + r 71 -4.5 -4.82901 | opp_overlap 972644 TCGAAGTACGTTAAA GTACG ACGG CGTGC TTTTTGTAGAACGAG CKL_0971 976129 - 975263 - | hydrolase TERM 1281 975930 - 975941 + g 74 -3 -5.39905 | TTAGTTGGTCCTGCA TCTA TTAG TAGA TTTTTATTATTTACT CKL_0972 976891 - 976166 - | acyltransferase TERM 1282 977031 - 976992 - H 93 -11.2 -3.56643 | opp_overlap 976999, overlap 976999 977014 TGTATATTTGCTAAA TATAAAATTACAGTTTTA AAAA TAAAATTGTAATTTTATA GAGCCAATATGTAGT TERM 1283 977024 - 976999 - H 70 -4.9 -4.78848 | opp_overlap 976999, overlap 976992 977014 TTGCTAAATATAAAA TTACAGTTTTA AAAA TAAAATTGTAA TTTTATAGAGCCAAT TERM 1284 976999 - 977024 + H 76 -7.1 -4.37092 | opp_overlap 976999 976992 977014 TTGCTAAATATAAAA TTACAGTTTTA AAAA TAAAATTGTAA TTTTATAGAGCCAAT TERM 1285 977862 - 977901 + G 80 -5.8 -4.95896 | gap 1, overlap 977864 CGCTAAATAATGGAA TTCGCCCTAGATGTCATCT GGA AGAT-ATAACAAGGGCGGA TTTTTATGGATTTGT CKL_0973 977342 - 978703 + | 2-isopropylmalate synthase-related protein TERM 1286 980100 - 980129 + G 82 -10.1 -3.28712 | opp_overlap 980099 980100 GACCTAACATAAAAC CTTTTCCTAAGGC AAAA GCTTTGGGAGAAG TTGTAGAAGGAAAGA CKL_0974 978740 - 980665 + | aconitate hydratase TERM 1287 980752 - 980787 + T 86 -9.8 -3.70076 | opp_overlap 980748 980752 980754, overlap 980754 AAAATAGTTAATATA GAGTCCCTGGATTTTT CCGA AAGCATCCAGGGACTA TTTAAATAAATTTAG TERM 1288 980754 - 980785 + T 95 -12.4 -3.42684 | opp_overlap 980752 980748 980754, overlap 980752 AATAGTTAATATAGA GTCCCTGGATTTTT CCGA AAGCATCCAGGGAC TATTTAAATAAATTT TERM 1289 980785 - 980754 - T 81 -10.2 -3.12187 | opp_overlap 980754 980752, overlap 980752 980748 AATAGTTAATATAGA GTCCCTGGATTTTT CCGA AAGCATCCAGGGAC TATTTAAATAAATTT CKL_0975 982230 - 980950 - | O-acetyl-L-homoserine sulfhydrylase-related protein TERM 1290 982342 - 982379 + H 83 -10.2 -3.31188 | opp_overlap 982347 982370, overlap 982347 982366 982367 982369 AAGAAAAGTAAAAAT AAAAATCTTCTTGTAA GATAAG TTACAAGAAGATTTTC TTCATGCTTCTCATC TERM 1291 982374 - 982347 - H 100 -10.1 -5.67529 | opp_overlap 982342 982347 982366 982367 982369, overlap 982370 AAGTAAAAATAAAAA TCTTCTTGTAA GATAAG TTACAAGAAGA TTTTCTTCATGCTTC TERM 1292 982347 - 982374 + H 100 -10.1 -4.75219 | opp_overlap 982347 982370, overlap 982342 982366 982367 982369 AAGTAAAAATAAAAA TCTTCTTGTAA GATAAG TTACAAGAAGA TTTTCTTCATGCTTC TERM 1293 985020 - 985006 - g 79 -3.6 -5.55664 | overlap 985007 CTAGTATGAAAAAAA CTATAG AAG CTATAA GAGAAAATAACCTTA metH1 982755 - 985160 + | MetH1 CKL_0977 985285 - 985974 + | hypothetical protein TERM 1294 985972 - 986023 + F 100 -17.2 -3.71378 | opp_overlap 985977 985978, overlap 985978 985979 TATAGAAATGCTTAT TAAAAGTTGCACTTATATTAAATA ATAT TGTTTAATATAAGTGCAGTTTTTA TTTAAGTGTAAAATA TERM 1295 986018 - 985977 - f 72 -6.1 -4.27192 | opp_overlap 985972 985978 985979, overlap 985978 AAATGCTTATTAAAA GTTGCACTTATATTAAATA ATAT TGTTTAATATAAGTGCAGT TTTTATTTAAGTGTA TERM 1296 986017 - 985978 - f 79 -9.6 -3.15592 | opp_overlap 985972 985978 985979, overlap 985977 AATGCTTATTAAAAG TTGCACTTATATTAAATA ATAT TGTTTAATATAAGTGCAG TTTTTATTTAAGTGT TERM 1297 985978 - 986017 + F 100 -14 -5.31519 | opp_overlap 985978 985977, overlap 985972 985979 AATGCTTATTAAAAG TTGCACTTATATTAAATA ATAT TGTTTAATATAAGTGCAG TTTTTATTTAAGTGT TERM 1298 985979 - 986016 + F 100 -15.3 -3.77285 | opp_overlap 985978 985977, overlap 985978 985972 ATGCTTATTAAAAGT TGCACTTATATTAAATA ATAT TGTTTAATATAAGTGCA GTTTTTATTTAAGTG CKL_0978 986150 - 986959 + | extracellular amino acid-binding protein CKL_0979 986989 - 987639 + | amino acid ABC transporter permease CKL_0980 987669 - 988448 + | amino acid ABC transporter ATP-binding protein argG 988590 - 989795 + | hypothetical protein argH 989799 - 991115 + | argininosuccinate lyase TERM 1299 991131 - 991159 + T 100 -10.5 -5.00884 | opp_overlap 991131 TAGCACCTTAAAAAA GTGGAAAACTT GATTGAA AAGTTTTCCAC TTTTTTAGAGCAAAT TERM 1300 991159 - 991131 - T 100 -10.5 -5.06451 | opp_overlap 991131 TAGCACCTTAAAAAA GTGGAAAACTT GATTGAA AAGTTTTCCAC TTTTTTAGAGCAAAT CKL_0983 991416 - 991189 - | hypothetical protein CKL_0984 992001 - 991516 - | transcriptional regulator TERM 1301 991847 - 991859 + g 79 -3.4 -5.68023 | GTACCTTTAATTATG TGCA TATCC TGCA TTTTTTTCATTCTAA TERM 1302 992303 - 992293 - H 71 -2.6 -5.48054 | ATTAAAAGCAAAAAA TAAA TAG TTTA TCCGAATATTGAAGG TERM 1303 992942 - 992921 - g 89 -11.7 -3.2661 | overlap 992919 TAAGTATGGAGAAGA CTTTGAAGC TCTT GCTTCAAAG GAAGCAACTAGACCT CKL_0985 992331 - 993305 + | asparaginyl-tRNA synthetase-related protein TERM 1304 993341 - 993313 - f 80 -5.4 -5.28942 | gap 1, opp_overlap 993312 993313 993338 TATTTTAAACAAAAA GCTGTCTTCAAAT AAAG ATTTGG-GACAGC CTTTTTAATGTATAA TERM 1305 993313 - 993341 + F 70 -7.6 -3.49993 | gap 1, opp_overlap 993313, overlap 993312 993338 TATTTTAAACAAAAA GCTGTCTTCAAAT AAAG ATTTGG-GACAGC CTTTTTAATGTATAA TERM 1306 993728 - 993712 - g 75 -5.1 -5.03994 | GGGTATATATAAAAA TGGAGGA AAA TCTTCCA AGGGTAAAGATATAA CKL_0986 993434 - 993790 + | hypothetical protein CKL_0987 993890 - 994408 + | hypothetical protein TERM 1307 995709 - 995681 - g 73 -8.2 -3.55447 | overlap 995682 995684 GGATTCACTATAGAA GTAGGAAAAGGG AAAAA CCCTCTTCCTAT AAGTCAATTTGATAA TERM 1308 995708 - 995682 - g 87 -11.7 -2.72947 | overlap 995681 995684 GATTCACTATAGAAG TAGGAAAAGGG AAAAA CCCTCTTCCTA TAAGTCAATTTGATA TERM 1309 995706 - 995684 - g 79 -9.9 -2.9062 | overlap 995682 995681 TTCACTATAGAAGTA GGAAAAGGG AAAAA CCCTCTTCC TATAAGTCAATTTGA CKL_0988 994502 - 995773 + | gamma-D-glutamyl-L-diamino acid endopeptidase TERM 1310 995803 - 995771 - T 91 -11.6 -3.04144 | gap 1, opp_overlap 995769 995768, overlap 995774 CTGGCATCTGTAATA TGATGTATTCCACCT CTTC AGGTGGAATACAT-A GGGATTTAAATACAA TERM 1311 995801 - 995774 - T 100 -15.8 -2.74523 | opp_overlap 995769 995768, overlap 995771 GCATCTGTAATATGA TGTATTCCACCT CTTC AGGTGGAATACA TAGGGATTTAAATAC CKL_0989 996346 - 995924 - | hypothetical protein CKL_0990 996527 - 999148 + | cation-transporting ATPase TERM 1312 999200 - 999152 - T 75 -7.8 -3.99091 | opp_overlap 999156 999197, overlap 999135 999156 999180 999197 GAAAGAAAGTAATAA TTTATTTCTAAGCTTTAAGAAT ATTTA ATTTTTAAAGCTTAGAAATTTA AAAAATCTTTTAAAG TERM 1313 999196 - 999156 - T 100 -13 -2.69957 | opp_overlap 999156, overlap 999135 999152 999180 GAAAGTAATAATTTA TTTCTAAGCTTTAAGAAT ATTTA ATTTTTAAAGCTTAGAAA TTTAAAAAATCTTTT TERM 1314 999156 - 999196 + T 100 -15.2 -3.58731 | opp_overlap 999135 999156 999152 999180 GAAAGTAATAATTTA TTTCTAAGCTTTAAGAAT ATTTA ATTTTTAAAGCTTAGAAA TTTAAAAAATCTTTT CKL_0991 1000082 - 999210 - | nucleic acid-binding protein TERM 1315 1000620 - 1000642 + G 100 -13.6 -3.67498 | ATATTCAATGGTGAA CTTTTAGGCA TTG TGCCTAAAAG TTATATTCCAAATTA nadE 1000293 - 1002209 + | NAD synthetase CKL_0993 1002239 - 1002664 + | hypothetical protein TERM 1316 1003456 - 1003446 - g 71 -5.4 -4.68103 | GCAATGGCAATAAAA TCTG TTG CAGA AGCAGAAGCAGAAGC CKL_0994 1002720 - 1003655 + | hypothetical protein TERM 1317 1003681 - 1003722 + F 71 -2.4 -5.38321 | gap 1, overlap 1003683 TGTTTAAAGTGAAAA TGGAGTGTGACAGGGATAA CAAGA TTA-GCCTGTGGCACTCTA TTTTTTATGCTATTT TERM 1318 1003940 - 1003924 - g 75 -9.5 -2.87988 | overlap 1003921 GAGGAGAAGGAACTA GGTTAAG GCC CTTAACC TGTAACATACCTAAA TERM 1319 1005254 - 1005244 - g 79 -2.4 -5.81412 | opp_overlap 1005244 TGGACTTAAAAAAAA TGCC AAT GGCC TTTATAAGACAGTCA CKL_0995 1003887 - 1006331 + | glucose-1-phosphate nucleotidyltransferase TERM 1320 1006811 - 1006794 - g 77 -4.1 -5.40474 | opp_overlap 1006794 1006797, overlap 1006770 1006797 1006808 ACTTCTGCAAAAAAA CAGGGTT TTGT AAACCTG GTTTCAGATATAATA TERM 1321 1009588 - 1009602 + G 70 -7.2 -3.64703 | opp_overlap 1009587 GCATGGAAAAAAGTT CAGATA TTA TATCTG TTTCCATAAAGAAAG TERM 1322 1009630 - 1009613 - g 72 -7.1 -3.85817 | opp_overlap 1009603 ATCTGTTTCCATAAA GAAAGAT GGAA ATCTTTC TAAGTCTAAATCATC addB 1006449 - 1009901 + | hypothetical protein TERM 1323 1010086 - 1010073 - g 79 -8.1 -4.09117 | opp_overlap 1010073 CGGATGTACAAAGAA GTGGC AGCG GCCAC TGTATAACTACTGTA surE 1009958 - 1010695 + | hypothetical protein TERM 1324 1010880 - 1010856 - g 71 -7.9 -3.45945 | overlap 1010857 TGGAGTTACAACTAA TCCTTCCTTAA TTG CTAAGGAAGGT AGAAATTTTAAAGAA TERM 1325 1010879 - 1010857 - g 86 -11.4 -2.67245 | overlap 1010856 GGAGTTACAACTAAT CCTTCCTTAA TTG CTAAGGAAGG TAGAAATTTTAAAGA tal 1010773 - 1011420 + | Tal TERM 1326 1011785 - 1011768 - T 76 -8.5 -3.58343 | opp_overlap 1011768 GTTATGATTTTTAAA GAGAGAT TTTA ATCTCTC TTTTTACGTATTGTA TERM 1327 1011768 - 1011785 + T 90 -8.5 -4.76312 | opp_overlap 1011768 GTTATGATTTTTAAA GAGAGAT TTTA ATCTCTC TTTTTACGTATTGTA CKL_0999 1012823 - 1011840 - | hypothetical protein TERM 1328 1012411 - 1012433 + g 88 -6.4 -5.36314 | opp_overlap 1012414, overlap 1012414 TTTGAATCTGAAGTA GAATTAGATT TTG AATCTAAATC TTTTTTAGTATTTTG rpoE 1013334 - 1012813 - | RNA polymerase sigma factor TERM 1329 1013737 - 1013755 + H 72 -3.3 -5.2204 | opp_overlap 1013737 GACTAAATAAATTTA TATTTTA AAAGG TAAAATA TTTTTCTTGATTATA TERM 1330 1014107 - 1014080 - H 100 -18.6 -3.3482 | opp_overlap 1014069 1014080 GAACCGCGGAAGTAA CCTTCTGCCTCT GTAT AGAGGCAGAAGG TTTTTGTTTTTCAAA TERM 1331 1014080 - 1014107 + H 100 -18.6 -5.61881 | opp_overlap 1014080, overlap 1014069 GAACCGCGGAAGTAA CCTTCTGCCTCT GTAT AGAGGCAGAAGG TTTTTGTTTTTCAAA TERM 1332 1014112 - 1014142 + H 90 -5.6 -5.64421 | GAGGCAGAAGGTTTT TGTTTTTCAAAATT CCG GAATTTGAAGAACA TTTTTTATTTAGAAT TERM 1333 1014702 - 1014692 - g 71 -5.4 -4.70887 | TCATGAACAAATAAA CCAT TGG ATGG ATGAAGCGGGATTTA CKL_1001 1014195 - 1014827 + | methyltransferase TERM 1334 1015048 - 1015024 - g 71 -8.6 -2.89659 | opp_overlap 1015027, overlap 1015023 1015026 CAGATTTAGAAGAAG GATGCAGAGG GTTTG CCTTTGCATC AGGACTTGCGGCTAT metB1 1014831 - 1015979 + | MetB1 cysK 1016021 - 1016932 + | hypothetical protein CKL_1004 1017000 - 1018298 + | glycosyl hydrolase TERM 1335 1018325 - 1018377 + T 90 -10.4 -3.73982 | gap 1, opp_overlap 1018325 1018332, overlap 1018325 1018332 AAAAATATATACAGA TTTAAAA-GGGAAATTGATATAAAA TTTA TTGTTTATCAATTTCCCTTTTTAAA TTATATTGATATGAA TERM 1336 1018325 - 1018376 + T 93 -12 -2.83907 | opp_overlap 1018325 1018332, overlap 1018325 1018332 AAAAATATATACAGA TTTAAAAGGGAAATTGATATAAAA TTTA TTGTTTATCAATTTCCCTTTTTAA ATTATATTGATATGA TERM 1337 1018376 - 1018325 - T 95 -12 -3.15593 | opp_overlap 1018325 1018325 1018332, overlap 1018332 AAAAATATATACAGA TTTAAAAGGGAAATTGATATAAAA TTTA TTGTTTATCAATTTCCCTTTTTAA ATTATATTGATATGA TERM 1338 1018369 - 1018332 - T 91 -10.1 -4.27259 | opp_overlap 1018325 1018325 1018332, overlap 1018325 TATACAGATTTAAAA GGGAAATTGATATAAAA TTTA TTGTTTATCAATTTCCC TTTTTAAATTATATT TERM 1339 1018332 - 1018369 + T 100 -10.1 -4.8066 | opp_overlap 1018332 1018325, overlap 1018325 1018325 TATACAGATTTAAAA GGGAAATTGATATAAAA TTTA TTGTTTATCAATTTCCC TTTTTAAATTATATT CKL_1005 1019329 - 1018517 - | glycosyltransferase TERM 1340 1018570 - 1018594 + g 100 -7.1 -5.63517 | opp_overlap 1018570 ATAAGGAGTGAAAAT CCCCGGTATAA TTT TTGTGCCAGGG TTTTTTCTTTCCACA CKL_1006 1020413 - 1019508 - | transcriptional regulator TERM 1341 1020562 - 1020606 + H 100 -14.1 -3.92716 | opp_overlap 1020569 1020579, overlap 1020559 1020567 1020569 TAAGTTGTTTATTGG TATGATACTATTTATAATACT TTA AGTATTATAAATAGTATGGTA TTTAGCTTATTTTAA TERM 1342 1020567 - 1020601 + H 100 -16.2 -2.87983 | opp_overlap 1020569 1020579, overlap 1020559 1020562 1020569 TGTTTATTGGTATGA TACTATTTATAATACT TTA AGTATTATAAATAGTA TGGTATTTAGCTTAT TERM 1343 1020599 - 1020569 - H 100 -14.4 -2.79183 | opp_overlap 1020559 1020567 1020562 1020569, overlap 1020579 TTTATTGGTATGATA CTATTTATAATACT TTA AGTATTATAAATAG TATGGTATTTAGCTT TERM 1344 1020569 - 1020599 + H 100 -14.4 -2.98137 | opp_overlap 1020569 1020579, overlap 1020559 1020567 1020562 TTTATTGGTATGATA CTATTTATAATACT TTA AGTATTATAAATAG TATGGTATTTAGCTT aroD 1020707 - 1021474 + | hypothetical protein aroE2 1021641 - 1022513 + | shikimate 5-dehydrogenase TERM 1345 1022530 - 1022583 + F 84 -10.8 -2.7218 | gap 1, opp_overlap 1022533 1022544, overlap 1022529 TTTTGAAATATTTAG CAATGGTCA-TGCAATATATATAGA AAAAA TCTATATATATTGCACTTACAATTG ATTGTATAAATATAT CKL_1009 1022626 - 1024626 + | enoate reductase TERM 1346 1024646 - 1024669 + F 100 -4.7 -6.32976 | opp_overlap 1024646 GGTGAAATAAAAAAA CTCTAATTT TCAATT AAGTTAGAG TTTTTTTATTTTTTT TERM 1347 1024669 - 1024646 - f 82 -2.5 -5.95539 | opp_overlap 1024646 GGTGAAATAAAAAAA CTCTAATTT TCAATT AAGTTAGAG TTTTTTTATTTTTTT TERM 1348 1025126 - 1025111 - g 72 -3.4 -5.15117 | GAAAATGGGAAAAAA TATTAT AAGG ATAATA AATGCAGTTATTTTT CKL_1010 1024868 - 1025986 + | hypothetical protein CKL_1011 1026196 - 1026966 + | hydrolase TERM 1349 1027083 - 1027038 - T 100 -10.7 -4.56153 | opp_overlap 1027037 1027036 1027035, overlap 1027035 TTAGGACAAAAATAA TACACACTAAAAACTCCATAA ATAT CTGGGGAATTTTTAGTGTGTA AATATTAGTTGTCAT CKL_1012 1028433 - 1027129 - | transporter protein TERM 1350 1028412 - 1028422 + g 77 -4 -5.4111 | GTTTACTTTCTAAGT CATT TAT AATG TTTTTTCTCATTATT CKL_1013 1029778 - 1028570 - | transporter protein aroE3 1030748 - 1029879 - | shikimate 5-dehydrogenase TERM 1351 1030447 - 1030465 + g 76 -9.6 -3.10796 | TGGCCTGTTAGTTTT CCATTGTC ATT GACGATGG TATTAACTGCTCCGA CKL_1015 1032712 - 1030790 - | enoate reductase TERM 1352 1030860 - 1030872 + g 70 -6.3 -4.18693 | GCTTTTACTGCATCA CCTAT TAC ATAGG TTTCCTTTATAGTTT TERM 1353 1031252 - 1031236 - G 74 -9.5 -2.77899 | opp_overlap 1031247, overlap 1031233 1031238 CTTTGCCATCAAGGA GATTCAC TGC GTGAATC AGTCCTGAATCATTT CKL_1016 1033627 - 1032761 - | sugar phosphate isomerase/epimerase TERM 1354 1033104 - 1033130 + g 71 -3 -5.31877 | overlap 1033096 TTTGCTCTGGCCCAG TGCCATGTAT CACAAAT AAGCATGGCA TTTTTTCTGCTGCAT CKL_1017 1033987 - 1034865 + | transcriptional regulator CKL_1018 1036051 - 1034927 - | pleiotropic regulatory protein spsC 1037230 - 1036055 - | SpsC TERM 1355 1036406 - 1036416 + g 72 -2.6 -5.4477 | opp_overlap 1036406, overlap 1036399 TAATATGCTTGAATA TATT TCA AATA TTTTTTTGCGCCTTT CKL_1020 1038506 - 1037304 - | transcriptional regulator CKL_1021 1038708 - 1039415 + | transposase glnS 1039938 - 1041608 + | glutaminyl-tRNA synthetase CKL_1023 1041789 - 1042628 + | polysaccharide deacetylase TERM 1356 1042701 - 1042648 - f 93 -11.5 -3.18239 | opp_overlap 1042642 1042655, overlap 1042659 1042661 GATATAGTTTATGAA TTATTTATATATATGTGCATAAATT AATT AATTTATGCACATATATATTTTTAA ATCATAAATTATAAT TERM 1357 1042655 - 1042694 + F 100 -18.4 -4.68593 | opp_overlap 1042648 1042659 1042661, overlap 1042642 TTTATGAATTATTTA TATATATGTGCATAAATT AATT AATTTATGCACATATATA TTTTTAAATCATAAA TERM 1358 1042690 - 1042659 - f 100 -14.8 -2.93435 | opp_overlap 1042655, overlap 1042648 1042661 TGAATTATTTATATA TATGTGCATAAATT AATT AATTTATGCACATA TATATTTTTAAATCA TERM 1359 1042688 - 1042661 - f 100 -13 -3.01684 | opp_overlap 1042655, overlap 1042659 1042648 AATTATTTATATATA TGTGCATAAATT AATT AATTTATGCACA TATATATTTTTAAAT TERM 1360 1044512 - 1044531 + G 71 -7.9 -3.51411 | opp_overlap 1044495 1044512 1044509, overlap 1044509 TTAATAGAAACAGGA GGAGCTT CTTTTA AAGCTCC TTGGTTTGGACAGCT TERM 1361 1044531 - 1044512 - g 71 -8.6 -2.94681 | opp_overlap 1044509 1044512, overlap 1044495 1044509 TTAATAGAAACAGGA GGAGCTTC TTTT AAAGCTCC TTGGTTTGGACAGCT asnB 1042787 - 1044628 + | hypothetical protein TERM 1362 1044680 - 1044641 - f 76 -4.4 -5.28414 | gap 1, opp_overlap 1044641 1044644, overlap 1044643 1044644 TAATAAAGATAAAAA TATGCGGTGCTTATAG-TA TTT TAGCTATAAGCACTGCTTG TTTTTTATAAGATTA TERM 1363 1044641 - 1044680 + F 100 -8.8 -5.27923 | gap 1, opp_overlap 1044641 1044643 1044644, overlap 1044644 TAATAAAGATAAAAA TATGCGGTGCTTATAG-TA TTT TAGCTATAAGCACTGCTTG TTTTTTATAAGATTA TERM 1364 1044678 - 1044643 - f 75 -7 -4.23487 | gap 1, opp_overlap 1044641 1044644, overlap 1044641 1044644 ATAAAGATAAAAATA TGCGGTGCTTATAG-TA TTT TAGCTATAAGCACTGCT TGTTTTTTATAAGAT TERM 1365 1044677 - 1044644 - f 84 -10.5 -3.11652 | gap 1, opp_overlap 1044641 1044644, overlap 1044643 1044641 TAAAGATAAAAATAT GCGGTGCTTATAG-TA TTT TAGCTATAAGCACTGC TTGTTTTTTATAAGA TERM 1366 1044644 - 1044677 + F 100 -12.7 -4.72201 | gap 1, opp_overlap 1044644 1044643 1044641, overlap 1044641 TAAAGATAAAAATAT GCGGTGCTTATAG-TA TTT TAGCTATAAGCACTGC TTGTTTTTTATAAGA CKL_1025 1044801 - 1045400 + | oxidoreductase TERM 1367 1045409 - 1045441 + F 72 -5 -4.98522 | gap 1 TAAGTAAATGTAAAA GCAGCTTTCTTACAA AAAT TTG-GAGGAAGTTGC TTTTTATATGAAATT TERM 1368 1045781 - 1045762 - g 70 -8 -3.06418 | opp_overlap 1045760 1045762, overlap 1045764 TTGGTACATAAAGGA TATTCTTC TTTA GAAGAATA TATTATAGATGAAAT TERM 1369 1045762 - 1045781 + G 71 -8 -3.25102 | opp_overlap 1045762 1045764, overlap 1045760 TTGGTACATAAAGGA TATTCTTC TTTA GAAGAATA TATTATAGATGAAAT CKL_1026 1045555 - 1046931 + | hypothetical protein TERM 1370 1046935 - 1046972 + T 100 -10.9 -5.76237 | gap 1, opp_overlap 1046934 1046940 TATAAAGTTTAAAGG TAAAACTCAGGAA-TCAA TTT TAGAATTCCTGAGTTTTA TTTTTTGTTTCTATA TERM 1371 1046967 - 1046940 - T 72 -6.4 -4.35926 | gap 1, opp_overlap 1046935, overlap 1046934 AGTTTAAAGGTAAAA CTCAGGAA-TCAA TTT TAGAATTCCTGAG TTTTATTTTTTGTTT CKL_1027 1047893 - 1047000 - | hypothetical protein CKL_1028 1048525 - 1047971 - | acetyltransferase CKL_1029 1048967 - 1049581 + | hypothetical protein CKL_1030 1049641 - 1050816 + | aminotransferase TERM 1372 1050848 - 1050829 - f 70 -6.6 -4.05926 | opp_overlap 1050829 TAATAAATTTACAAA TAGTATAA TTGA TTATACTA TTTTATTTTTGGAGG TERM 1373 1050829 - 1050848 + F 88 -6.6 -5.26119 | opp_overlap 1050829 TAATAAATTTACAAA TAGTATAA TTGA TTATACTA TTTTATTTTTGGAGG CKL_1031 1050871 - 1051878 + | asparaginase-related protein TERM 1374 1051893 - 1051875 - f 82 -6.2 -5.06414 | opp_overlap 1051875 TCGTTTGAATAAAAA TTAAAAAT TAA ATTTTTAA TTTTATTGAAGCAAG TERM 1375 1051875 - 1051893 + F 77 -6.2 -4.63218 | opp_overlap 1051875 TCGTTTGAATAAAAA TTAAAAAT TAA ATTTTTAA TTTTATTGAAGCAAG TERM 1376 1051961 - 1051990 + F 78 -4.3 -5.38839 | overlap 1051964 ATTGTTTTGGATTAA GTGGGCGTTATTA TTTA TAATATTGCCTGC TTTTGTTTTTATGTA TERM 1377 1052010 - 1052048 + F 100 -20.8 -3.74693 | opp_overlap 1052010, overlap 1052002 1052024 GTTTTTATGTAAAAA TACATCCTATTAAATTTC ATA GAAATTTAATAGGATGTA TTTGATGAAATCGGG TERM 1378 1052048 - 1052010 - f 100 -20.8 -4.65895 | opp_overlap 1052002 1052010 1052024 GTTTTTATGTAAAAA TACATCCTATTAAATTTC ATA GAAATTTAATAGGATGTA TTTGATGAAATCGGG CKL_1032 1052249 - 1053997 + | transport protein, ATPase and permease component TERM 1379 1054271 - 1054247 - f 71 -7.3 -3.84931 | opp_overlap 1054247 TAAGAAAGAGTTAAA CTTCTTACA TTTCATC TGTAAGAAG TTTTTTATTGTATAA TERM 1380 1054247 - 1054271 + F 100 -7.3 -5.60689 | opp_overlap 1054247 TAAGAAAGAGTTAAA CTTCTTACA TTTCATC TGTAAGAAG TTTTTTATTGTATAA TERM 1381 1054325 - 1054361 + F 100 -11.8 -5.88197 | opp_overlap 1054330 ACCAGACACACTGGA GACTAGGTAAACTGAA GTTTA TTCGGTTTACTTGGTC TTTTTTTATATTTAA nifH1 1054437 - 1055255 + | NifH1 nifD2 1055280 - 1056860 + | hypothetical protein TERM 1382 1056990 - 1056977 - f 95 -8.1 -5.54079 | TCAAAAAGTAAAAAA CTGCG AAAA CGCAG TAAAAAAAATTTCTT nifK2 1057029 - 1058378 + | NifK2 TERM 1383 1058606 - 1058630 + F 100 -7.3 -5.60689 | opp_overlap 1058605 TGAGAAAGAGTTAAG CTTCTTACA TTTCATC TGTAAGAAG TTTTTTATTGTATAA TERM 1384 1058682 - 1058722 + F 100 -20.1 -5.20783 | opp_overlap 1058679 1058695 TGACCAGACACACTG GAGACTAGGTAAACTGAAT TTT ATTCGGTTTACTTAGTCTC TTTTTATATTTAAGT nifB1 1058762 - 1060033 + | NifB1 TERM 1385 1060861 - 1060832 - g 70 -3.8 -5.0065 | TACTTATAAATAAAA CAATAACTTT TATAGAAAGG AAAGTTATTG TCTGGAAAGAAGAAT CKL_1037 1060063 - 1060890 + | ABC transporter permease TERM 1386 1061023 - 1061013 - g 80 -5.4 -5.14563 | overlap 1061019 TGTGGCAGTAAAAAA GATG AAG CATC TAATGCCGATAAAAG TERM 1387 1061072 - 1061062 - g 71 -6.8 -4.12198 | TACAAGTTGTTAAAA CCTG GAG CAGG AAAGATTGTACAGCA CKL_1038 1060932 - 1062011 + | transporter protein CKL_1039 1062024 - 1062854 + | ABC transporter ATP-binding protein TERM 1388 1062862 - 1062845 - f 70 -5.7 -4.29153 | TGATGATAAAAAACA TGTAATT TAAA AATTACA ATTCCAAAGTCTCTT TERM 1389 1062887 - 1062936 + F 100 -12.7 -3.04248 | opp_overlap 1062884 1062889 TCTCTTTACAAATTC AATTTAATTTCTTTCTAAAAATA ATAT TATTTTTAGAAAGAAATTAAAAA TCTTAAGGAGTGTTA TERM 1390 1062934 - 1062889 - f 100 -19.7 -3.32997 | opp_overlap 1062887, overlap 1062884 TCTTTACAAATTCAA TTTAATTTCTTTCTAAAAATA ATAT TATTTTTAGAAAGAAATTAAA AATCTTAAGGAGTGT CKL_1040 1062954 - 1064024 + | ABC transporter permease CKL_1041 1064061 - 1064849 + | ABC transporter permease nifD3 1064943 - 1066460 + | NifD3 TERM 1391 1067257 - 1067242 - g 71 -7.6 -3.38768 | opp_overlap 1067237 1067249 GTAGAGGATTTAGAA CAGCTT TCAG AAGCTG CTGCTACTGTTTCGT nifD4 1066480 - 1067991 + | NifD4 TERM 1392 1067983 - 1067971 - f 80 -6.3 -4.96762 | opp_overlap 1067971 TATATATTAGAAAAA CAACA TTA TGTTG TATATTAAGAAAATA nifK3 1068030 - 1069274 + | NifK3 nifH2 1069472 - 1070290 + | NifH2 nifD5 1070512 - 1070790 + | NifD5 nifD6 1070875 - 1071984 + | NifD6 TERM 1393 1072030 - 1072006 - g 71 -8.7 -2.91735 | GGAACAGCCTAGACA TTATTGTACTC TTG GAGCACAACAA TCAGTAAATGCAATA nifK4 1071977 - 1073305 + | NifK4 TERM 1394 1073350 - 1073374 + F 90 -5.7 -5.69262 | opp_overlap 1073350 GACTAGAAAACTAGA GGTTGTATCTT ATT GAGATTCAGCC TTTTTATTTTTGTAA oppA1 1073456 - 1075075 + | OppA1 oppB 1075119 - 1076057 + | hypothetical protein TERM 1395 1076531 - 1076557 + G 71 -6.7 -4.07455 | overlap 1076532 1076534 GAAATGCAATTGTTG CCATTGGAATA ATATA TATTCCAATGA TTTCTCGTCTTACTA TERM 1396 1076532 - 1076556 + G 81 -10.2 -3.0375 | overlap 1076531 1076534 AAATGCAATTGTTGC CATTGGAATA ATATA TATTCCAATG ATTTCTCGTCTTACT oppC 1076080 - 1076982 + | hypothetical protein TERM 1397 1077725 - 1077675 - g 70 -6.3 -4.19817 | opp_overlap 1077689 1077691, overlap 1077684 TGTATGCAGGTAAAA TTGTAGAAACAGGAGATGTAAAA GACAT TTTTACATCTCCTGTACATCCAT ATACAATGGCTCTGA TERM 1398 1077716 - 1077684 - g 100 -16.6 -3.97406 | opp_overlap 1077689 1077691, overlap 1077675 GTAAAATTGTAGAAA CAGGAGATGTAAAA GACAT TTTTACATCTCCTG TACATCCATATACAA TERM 1399 1077808 - 1077789 - g 74 -7.2 -4.11585 | gap 1, opp_overlap 1077788 AGCCATTAGAAACAA TTCAGG-GG AGT CCTCCTGAA CTCTTAAAAAAAATA oppD 1076975 - 1077940 + | OppD oppF 1077958 - 1078926 + | hypothetical protein CKL_1054 1078997 - 1079566 + | rRNA methylase CKL_1055 1079644 - 1080357 + | transcriptional regulator CKL_1056 1080370 - 1081350 + | two component sensor kinase TERM 1400 1081525 - 1081562 + F 100 -15.1 -5.33921 | opp_overlap 1081519 1081523 AACTAGAAAGCTAGA GGCTAACAGTTCCTTTT AATT AAAGGGAGTTGTTAGCC TTTTTTAGTTAGTTT CKL_1057 1081712 - 1082347 + | hypothetical protein CKL_1058 1082464 - 1083021 + | hypothetical protein TERM 1401 1084423 - 1084386 - g 100 -12.7 -3.10474 | overlap 1084378 CAGAAGATTCTAATA CTGTGCCGGCACAGGTA CAAA CACCAGCACCGGCACAA ACCACAACAGTTACT CKL_1059 1083110 - 1084846 + | hypothetical protein TERM 1402 1084900 - 1084934 + T 100 -13.8 -3.09202 | opp_overlap 1084893, overlap 1084907 1084913 ATATCTAATTTTTTA GCAGTAAGGAGATTTT TAT AAAAATTCCTTACTGC TCTTAAAATATGTCT CKL_1060 1086119 - 1084971 - | methyl-accepting transducer TERM 1403 1085235 - 1085250 + g 71 -7.6 -3.53343 | TTCTCCTGCTCTTGC TGCTTC TATT GAAGCA TTTAAACCCAGCATT TERM 1404 1086298 - 1086352 + r 100 -25 -5.18371 | opp_overlap 1086298 TACAGTTGAATAAAA TTAGCTTGTTGAATAATTAAACATAT AAT AAATGTTTAATTATTCAACAAGCTAA TTTTATTTTATAGAA TERM 1405 1086352 - 1086298 - R 100 -25 -4.66987 | opp_overlap 1086298 TACAGTTGAATAAAA TTAGCTTGTTGAATAATTAAACATAT AAT AAATGTTTAATTATTCAACAAGCTAA TTTTATTTTATAGAA CKL_1061 1086557 - 1086381 - | hypothetical protein CKL_1062 1087533 - 1086559 - | hypothetical protein CKL_1063 1087718 - 1088359 + | heat shock protein TERM 1406 1088413 - 1088439 + F 100 -13.9 -5.09895 | AAGAGTACCCTTGAA CTGCTGACAAA ATATG TTTGTCAGCAG TTTTTTACATAGGTA gerXA 1088538 - 1090019 + | GerXA CKL_1065 1090012 - 1091106 + | spore germination protein (gerKB ) CKL_1066 1092180 - 1091173 - | hypothetical protein CKL_1067 1093412 - 1092240 - | iron containing alcohol dehydrogenase topA2 1093775 - 1095958 + | DNA topoisomerase III bdh2 1095999 - 1097168 + | Bdh2 TERM 1407 1097189 - 1097225 + T 71 -8.3 -3.25729 | opp_overlap 1097189 AGTAAAAATATAAAA GCACAAAAACTAA ATATAAATTTC TTAGTTTTTGTGC TTCATAGTGATTATA TERM 1408 1097225 - 1097189 - T 100 -10.4 -5.00027 | opp_overlap 1097189 AGTAAAAATATAAAA GCACAAAAACTAAATA TAAAT TTCTTAGTTTTTGTGC TTCATAGTGATTATA CKL_1070 1097991 - 1097236 - | transcriptional regulator CKL_1071 1099276 - 1098062 - | two-component sensor histidine kinase CKL_1072 1099532 - 1099810 + | microcompartment protein TERM 1409 1100381 - 1100405 + G 79 -8.1 -3.99324 | opp_overlap 1100381 1100379 GCACTTAAACAAACA GATAAATATTT AGG AAATGTTTATC TTTGTGATGCTGGCC CKL_1073 1099838 - 1100752 + | microcompartment protein TERM 1410 1101385 - 1101374 - g 81 -4.4 -5.48063 | AGGTAATAGAAAAAA TAGC TAAG GCTA CAGAAGTTGAAGCTG CKL_1074 1101247 - 1102722 + | acetaldehyde dehydrogenase CKL_1075 1102833 - 1104047 + | alcohol dehydrogenase TERM 1411 1104663 - 1104652 - g 81 -4.4 -5.48063 | AGGTAATAGAAAAAA TAGC TAAG GCTA CAGAAGTTGAAGCTG CKL_1076 1104525 - 1106000 + | acetaldehyde dehydrogenase CKL_1077 1106112 - 1107419 + | alcohol dehydrogenase CKL_1078 1107524 - 1108738 + | alcohol dehydrogenase TERM 1412 1108805 - 1108770 - f 100 -16.4 -3.85256 | opp_overlap 1108770 1108782 TACATTTAAATATAA TGCCGTGATAGATTTG CTTT CAAATTTATCACGGCA TTTAGTGATTGGATT TERM 1413 1108770 - 1108805 + F 100 -18.6 -3.85362 | opp_overlap 1108770, overlap 1108782 TACATTTAAATATAA TGCCGTGATAGATTTG CTTT CAAATTTATCACGGCA TTTAGTGATTGGATT TERM 1414 1109014 - 1109028 + F 73 -4.4 -5.14985 | overlap 1109009 1109024 TATAGGGATATTATT TTATAA ATT TTATAA TTTTTATATATTTAA TERM 1415 1110019 - 1110008 - g 77 -4.4 -5.31059 | opp_overlap 1110008 AGAGGAAGTAAAAAA TCCT CAAA AGGA TTTACCAAGAGGTAT CKL_1079 1109271 - 1110659 + | permease TERM 1416 1110987 - 1110997 + F 73 -8.2 -3.40788 | TATAGTAAGTTTTGC CGGC AGA GCCG TTAATTAGATTAAGT TERM 1417 1111035 - 1111072 + F 100 -13.5 -4.99638 | opp_overlap 1111042 1111043 TTGGGTGGTACCGCG GACCAAACTTCTCGCCC CATA GGGCAGAAAGTTTGGTC TTTTTATATGCATAT ilvC1 1111164 - 1112165 + | ketol-acid reductoisomerase ilvB1 1112221 - 1113882 + | IlvB1 TERM 1418 1113932 - 1113970 + F 100 -9.6 -4.89063 | opp_overlap 1113939, overlap 1113934 AGTATAAGTATTTTT AAGGGAATTGGCACAGCA TTA TGCTGCACCAATTTCCTA TTTATTTTTGGCTGC TERM 1419 1113934 - 1113968 + F 100 -12.2 -4.05491 | opp_overlap 1113939, overlap 1113932 TATAAGTATTTTTAA GGGAATTGGCACAGCA TTA TGCTGCACCAATTTCC TATTTATTTTTGGCT TERM 1420 1113963 - 1113939 - f 93 -11.5 -3.17723 | opp_overlap 1113934 1113932 GTATTTTTAAGGGAA TTGGCACAGCA TTA TGCTGCACCAA TTTCCTATTTATTTT CKL_1082 1114123 - 1114494 + | transcriptional regulator TERM 1421 1114676 - 1114713 + F 100 -17.4 -3.88438 | opp_overlap 1114679, overlap 1114679 AAATAATTTTTTATA TAATGGCATTAGTTAG TTTTAT CTAACTAATGCCATTA TTGTATTTGATGTGC TERM 1422 1114679 - 1114710 + F 100 -14.7 -4.05193 | opp_overlap 1114679, overlap 1114676 TAATTTTTTATATAA TGGCATTAGTTAG TTTTAT CTAACTAATGCCA TTATTGTATTTGATG TERM 1423 1114710 - 1114679 - f 100 -14.7 -3.494 | opp_overlap 1114676 1114679 TAATTTTTTATATAA TGGCATTAGTTAG TTTTAT CTAACTAATGCCA TTATTGTATTTGATG TERM 1424 1116470 - 1116458 - g 72 -4.9 -4.77165 | overlap 1116435 1116459 TTGGTGACAATAAAA TCATT GGA AATGA TAACAGTGCCAATGT TERM 1425 1117603 - 1117593 - g 74 -5.4 -4.8048 | overlap 1117594 TTGTGATATCAAAAA TTGC AGT GCAA ATGCAAATGTGATTT TERM 1426 1119014 - 1119041 + G 74 -7.8 -3.91084 | gap 1 TTACTGTTACCATTA CTGCCAATG-GTG CTA CACATATTGGCGG TTTAGTTGGCACTGG CKL_1083 1114945 - 1119270 + | surface-layer protein TERM 1427 1119382 - 1119411 + T 86 -10.1 -3.65294 | overlap 1119378 AGGCCGATGTCATGG GGCGGCTTTGA AATAAAAA TCAAAGTCGCC TTAATTTATCTAAGC CKL_1084 1119653 - 1119429 - | hypothetical protein TERM 1428 1119546 - 1119558 + g 84 -3.5 -5.73978 | ATATCCTAAATTGGT TAAAT TAT ATTTA TTTTTTCTTTCTGAT TERM 1429 1119692 - 1119707 + r 72 -3.3 -5.26316 | opp_overlap 1119692 TTTAAAACAGATATA GTTAG ATAAAA CTAAC TTTTTTATGCACTAC CKL_1085 1120685 - 1119693 - | transcriptional regulator TERM 1430 1120765 - 1120783 + r 76 -9 -3.11955 | opp_overlap 1120767 TATTATACTTTAATT GATATTGA TTA TCAATATC TTCGCTGGTGATTAT CKL_1086 1121275 - 1120844 - | hypothetical protein nifS1 1121438 - 1122607 + | NifS1 TERM 1431 1122887 - 1122871 - g 78 -2.3 -5.81412 | GGCATTTAAAAAAAA TGTAATA GAC TATTTCA TACAGGAATATATGG TERM 1432 1123608 - 1123598 - g 70 -4 -5.02606 | GAGGAAAGAATAAAA GTAA AAT TTAC AGACAGACAAAGGGC trmU 1122626 - 1123696 + | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TERM 1433 1123973 - 1124000 + F 100 -10 -5.57729 | gap 1 TGGGTGGTACCGCGG TAGACTTTC-GCC CCA GGCAGAAGGTCTA TTTTTTATGTTATTT ilvC2 1124046 - 1125047 + | ketol-acid reductoisomerase TERM 1434 1125097 - 1125075 - f 100 -13.6 -3.93664 | opp_overlap 1125075 AGTTAACATATTAAA TTTGGAAGCT TAA AGCTTCCAAA TTTTTATTTTAAACT TERM 1435 1125075 - 1125097 + F 100 -13.6 -5.46706 | opp_overlap 1125075 AGTTAACATATTAAA TTTGGAAGCT TAA AGCTTCCAAA TTTTTATTTTAAACT CKL_1090 1125281 - 1127698 + | hypothetical protein CKL_1091 1128274 - 1127738 - | hypothetical protein TERM 1436 1128405 - 1128433 + r 77 -6.3 -4.65895 | opp_overlap 1128405 1128428 AATCTATAATATGAA TTTAAATTAATTT GTG ACATTAATTTAAA TTTTTAAATAAAAGG TERM 1437 1128485 - 1128447 - R 100 -13.4 -4.88405 | opp_overlap 1128447 1128454, overlap 1128449 AATTTTTAAATAAAA GGCAAAAGCCATAGAT TTTTAGC ATCTATGGCTTTTGTC TAAGTTAAAATTTAT TERM 1438 1128447 - 1128485 + r 100 -15.6 -2.56314 | opp_overlap 1128447 1128449, overlap 1128454 AATTTTTAAATAAAA GGCAAAAGCCATAGAT TTTTAGC ATCTATGGCTTTTGTC TAAGTTAAAATTTAT TERM 1439 1128483 - 1128449 - R 100 -14.6 -2.70452 | opp_overlap 1128447 1128454, overlap 1128447 TTTTTAAATAAAAGG CAAAAGCCATAGAT TTTTAGC ATCTATGGCTTTTG TCTAAGTTAAAATTT TERM 1440 1128454 - 1128478 + r 83 -8.7 -4.57474 | opp_overlap 1128449 1128447, overlap 1128447 AAATAAAAGGCAAAA GCCATAGAT TTTTAGC ATCTATGGC TTTTGTCTAAGTTAA CKL_1092 1129774 - 1128497 - | hypothetical protein TERM 1441 1128832 - 1128858 + g 87 -8.8 -4.15577 | TTGTACTGTCCGCAT CAGGGTTTATAG TTT CTATAGAACCTG TTATTTCCTTATTGG CKL_1093 1132911 - 1129777 - | transporter protein CKL_1094 1133399 - 1132908 - | transcriptional regulator TERM 1442 1133458 - 1133432 - R 72 -6.9 -4.11235 | opp_overlap 1133437 1133452, overlap 1133428 1133437 1133452 1133455 TAATTAGTACATAAA TAAAATATTTA GCCAT TAAATATTTTA TAAATATATAATACA TERM 1443 1133599 - 1133576 - R 78 -7.5 -4.29396 | opp_overlap 1133567 1133576 AATTATGGACTAAAA GCTCAGCTT GAATTT AAGCTAAGC TTTTACTACTAATAT TERM 1444 1133576 - 1133599 + r 70 -6 -4.32436 | opp_overlap 1133576, overlap 1133567 AATTATGGACTAAAA GCTCAGCTTG AATT TAAGCTAAGC TTTTACTACTAATAT CKL_1095 1134966 - 1133608 - | hypothetical protein TERM 1445 1134158 - 1134144 - G 79 -10 -2.89881 | opp_overlap 1134143 1134144 GAGCCATTGCAGATA TCCAGC CAG GCTGGA ATTCATTATCATCTA TERM 1446 1134144 - 1134158 + g 77 -10 -2.68786 | opp_overlap 1134144, overlap 1134143 GAGCCATTGCAGATA TCCAGC CAG GCTGGA ATTCATTATCATCTA TERM 1447 1134905 - 1134891 - G 72 -8.6 -3.06515 | opp_overlap 1134889 1134891, overlap 1134890 CTGTAGTTTGAAAAG CCTGTA CCA TACAGG TGTTAGTGCATATAA TERM 1448 1134891 - 1134905 + g 72 -8.6 -3.16492 | opp_overlap 1134891 1134890, overlap 1134889 CTGTAGTTTGAAAAG CCTGTA CCA TACAGG TGTTAGTGCATATAA TERM 1449 1135186 - 1135143 - R 93 -12.2 -2.67992 | gap 1, opp_overlap 1135144 1135154, overlap 1135140 1135154 TATAGCATTACAGCA GCATTAAAAAATAACCTCC ATTTTTA GGAGGTTATTTTTTAAT-C TAATATATATACATT TERM 1450 1135144 - 1135186 + r 93 -12.4 -2.73543 | opp_overlap 1135143 1135140 1135154, overlap 1135154 ATAGCATTACAGCAG CATTAAAAAATAACCTCC ATTTTTA GGAGGTTATTTTTTAATC TAATATATATACATT TERM 1451 1135176 - 1135154 - R 91 -7.8 -5.19212 | opp_overlap 1135144 1135154, overlap 1135143 1135140 AGCAGCATTAAAAAA TAACCTCC ATTTTTA GGAGGTTA TTTTTTAATCTAATA TERM 1452 1135154 - 1135176 + r 91 -7.8 -5.23316 | opp_overlap 1135154 1135143 1135140, overlap 1135144 AGCAGCATTAAAAAA TAACCTCC ATTTTTA GGAGGTTA TTTTTTAATCTAATA CKL_1096 1136176 - 1135181 - | hypothetical protein TERM 1453 1135899 - 1135913 + g 80 -7.2 -4.64763 | overlap 1135896 TTTTTAAATAAGTGG TTCTGA ATT TCAGAA TTGTTTTTTGCGTCC CKL_1097 1137833 - 1136310 - | methyl-accepting transducer CKL_1098 1138033 - 1138215 + | hypothetical protein CKL_1099 1138255 - 1139310 + | glycosyltransferase TERM 1454 1139432 - 1139457 + F 73 -7.6 -3.77831 | opp_overlap 1139432 TCCTTAAATTGACAA TCCTATGTGG CTGAAT CCCCATAGGA TTTAAGTCTTAATAC TERM 1455 1139457 - 1139432 - f 70 -7.6 -3.47349 | opp_overlap 1139432 TCCTTAAATTGACAA TCCTATGTGG CTGAAT CCCCATAGGA TTTAAGTCTTAATAC CKL_1100 1139511 - 1142273 + | surface-layer protein TERM 1456 1144490 - 1144474 - g 71 -8.1 -3.30214 | overlap 1144462 1144477 AAGTCATTACAGTAA TAATCCT GTC AGGATTA CAATAACAGTAACTG CKL_1101 1142297 - 1144510 + | surface-layer protein TERM 1457 1144516 - 1144545 + F 78 -10.1 -2.63079 | opp_overlap 1144518, overlap 1144523 AACTGATTAGATAAT TAGGAAAGGGCAG AGAT TTGTCCTTTCCTG TAAGTTATATAAAGG CKL_1102 1144533 - 1149845 + | surface-layer protein TERM 1458 1149920 - 1149894 - f 100 -6.6 -5.58179 | opp_overlap 1149896, overlap 1149896 TATTACAATAAAAAA TAGGAGGAAG TAAACAT CTTCCTCCTT TAAACAAAATAACAT TERM 1459 1149896 - 1149918 + F 80 -9.2 -3.53811 | opp_overlap 1149896 1149894 TTACAATAAAAAATA GGAGGAAG TAAACAT CTTCCTCC TTTAAACAAAATAAC TERM 1460 1149918 - 1149896 - f 86 -9.2 -4.41512 | opp_overlap 1149896, overlap 1149894 TTACAATAAAAAATA GGAGGAAG TAAACAT CTTCCTCC TTTAAACAAAATAAC CKL_1103 1149970 - 1150644 + | hydrolase CKL_1104 1150673 - 1151356 + | hydrolase TERM 1461 1151396 - 1151384 - f 79 -4.9 -5.54907 | GCGAGAAAAGAAAAA CTATT GTA AATAG AGCAAAAAAGGCATA TERM 1462 1151408 - 1151448 + F 100 -11.6 -4.99035 | gap 1, opp_overlap 1151408 1151407 1151406 1151410 ATAGAGCAAAAAAGG CATATAAGTGACAAGGTTA ATCT TAAC-TTGTCATTTATATG TTTTTATATGGCTAA TERM 1463 1151448 - 1151408 - f 77 -9.4 -2.83261 | gap 1, opp_overlap 1151408, overlap 1151407 1151406 1151410 ATAGAGCAAAAAAGG CATATAAGTGACAAGGTTA ATCT TAAC-TTGTCATTTATATG TTTTTATATGGCTAA hom2 1151614 - 1152915 + | homoserine dehydrogenase TERM 1464 1153014 - 1152980 - T 100 -13.2 -3.41587 | opp_overlap 1152980 1152984, overlap 1152975 1152984 CTTCATAAAATCCAA CAAATCCCATTAAA GTTATGA TTTAATGGGATTTG TTTTTAAAGTTTTTC TERM 1465 1152980 - 1153014 + T 100 -13.2 -4.7657 | opp_overlap 1152975 1152980 1152984, overlap 1152984 CTTCATAAAATCCAA CAAATCCCATTAAA GTTATGA TTTAATGGGATTTG TTTTTAAAGTTTTTC TERM 1466 1152984 - 1153010 + T 91 -8.2 -4.88293 | opp_overlap 1152980 1152975 1152984, overlap 1152980 ATAAAATCCAACAAA TCCCATTAAA GTTATGA TTTAATGGGA TTTGTTTTTAAAGTT TERM 1467 1153010 - 1152984 - T 81 -8.2 -4.3351 | opp_overlap 1152984 1152980, overlap 1152980 1152975 ATAAAATCCAACAAA TCCCATTAAA GTTATGA TTTAATGGGA TTTGTTTTTAAAGTT act 1153798 - 1153070 - | Act pfl 1156043 - 1153809 - | Pfl TERM 1468 1154553 - 1154565 + g 73 -7.7 -3.5812 | AAGGGCCATAAGTCC TGCCT CAT AGGCA TATTTATCGTGCATA TERM 1469 1156145 - 1156120 - R 78 -9.1 -3.26319 | overlap 1156127 AATTCTTGATATTAA TCAAAAAGACC ACCT GGACTTTTTGA TTGCCCAGGCGGTCG TERM 1470 1156159 - 1156127 - R 100 -10.6 -4.91873 | overlap 1156120 GATATTAATCAAAAA GACCACCTGGAC TTTTTGATT GCCCAGGCGGTC GGCTTTTAAAAATCG CKL_1108 1158260 - 1156302 - | sensor protein TERM 1471 1156883 - 1156901 + g 77 -4.6 -5.30575 | opp_overlap 1156883 1156887, overlap 1156872 GTACTTGTTGATAAA CAAATCTT TTA AAGATCTG TTTTTTGAATTTTTC TERM 1472 1157635 - 1157646 + g 71 -3 -5.15117 | opp_overlap 1157631, overlap 1157631 GGGGAAATGCATATT GATA CCAA TATC TTTTTTCCGCTTTTG TERM 1473 1157684 - 1157699 + g 100 -6.2 -6.14618 | GAGTAGTTTCATGGT GGTATA TTTC TATACC TTTTTTTGTTTTATC CKL_1109 1158810 - 1158253 - | signal transduction protein CKL_1110 1159956 - 1159135 - | signal transduction protein TERM 1474 1160308 - 1160276 - H 100 -15.1 -2.55213 | opp_overlap 1160276, overlap 1160272 TAGTGATGCAACCGA CCCTGTATTCATAAA TAT TTTATGGATACAGGG TTTTGCTTTTTAAAA TERM 1475 1160276 - 1160308 + H 100 -17.3 -4.77757 | opp_overlap 1160272 1160276 TAGTGATGCAACCGA CCCTGTATTCATAAA TAT TTTATGGATACAGGG TTTTGCTTTTTAAAA CKL_1111 1160337 - 1161089 + | type IV leader peptidase/N-methyltransferase TERM 1476 1161263 - 1161253 - g 100 -6.8 -5.75538 | opp_overlap 1161253 GGTAAAAAAGAAAAA GGGT TTT ACCC TGATTGAACTTATGA CKL_1112 1161230 - 1161757 + | hypothetical protein TERM 1477 1161766 - 1161799 + F 83 -10.5 -2.92513 | opp_overlap 1161773, overlap 1161769 1161773 TCAATAATATTATTT TAAGAGAGAACATGT CTTT ACGTGTTCTTTCTTG TATAATTAAGATTAT TERM 1478 1161769 - 1161796 + F 86 -10 -3.60214 | opp_overlap 1161773, overlap 1161766 1161773 ATAATATTATTTTAA GAGAGAACATGT CTTT ACGTGTTCTTTC TTGTATAATTAAGAT TERM 1479 1161773 - 1161792 + F 76 -7.2 -4.42721 | opp_overlap 1161773, overlap 1161769 1161766 TATTATTTTAAGAGA GAACATGT CTTT ACGTGTTC TTTCTTGTATAATTA TERM 1480 1162203 - 1162191 - g 89 -7.7 -5.10064 | opp_overlap 1162191 TTGAAGATATAAAAA TAGCC ACA GGCTA TAATGTTAAAACTGC exeE1 1161839 - 1163512 + | ExeE1 exeF3 1163632 - 1164825 + | ExeF3 CKL_1115 1164847 - 1166322 + | hypothetical protein CKL_1116 1166309 - 1167139 + | hypothetical protein TERM 1481 1167413 - 1167402 - g 77 -4.4 -5.13343 | opp_overlap 1167402 1167410 TAAGTGAAAATAAAA CTTC TGCA GAAG CTCTTGTTTCTCTTG CKL_1117 1167185 - 1169161 + | hypothetical protein CKL_1118 1169219 - 1169530 + | hypothetical protein CKL_1119 1169540 - 1170073 + | hypothetical protein CKL_1120 1170120 - 1170623 + | hypothetical protein CKL_1121 1170752 - 1171621 + | methyltransferase TERM 1482 1171857 - 1171879 + F 74 -8 -3.58522 | opp_overlap 1171857, overlap 1171855 1171863 TGTTTTATAATTTAA TTTATTTTTA TCA TAAAAATAAA TATTTATGATAAATT TERM 1483 1171879 - 1171857 - f 71 -8 -3.23274 | opp_overlap 1171857 1171855 1171863 TGTTTTATAATTTAA TTTATTTTTA TCA TAAAAATAAA TATTTATGATAAATT cheY 1171927 - 1172289 + | hypothetical protein TERM 1484 1173563 - 1173549 - g 77 -8.6 -3.69702 | GATCATGGAATAGAA TCTGCA GAA TGCAGA AGATCTCTAGGTAAA cheA1 1172313 - 1174337 + | CheA1 cheW1 1174384 - 1174878 + | CheW1 TERM 1485 1176048 - 1176030 - g 74 -8.9 -3.05596 | overlap 1176043 1176044 TATCTTGGCATTGAA TGCAGCT GTAGA AGCTGCA AGGGCAGGGCAGTAC TERM 1486 1176114 - 1176102 - g 70 -6.3 -4.26003 | AGAAGAGGTAAGAAA TTTGG CTG CCAAA TCAGCAGATGCAGCA CKL_1125 1174897 - 1176444 + | methyl-accepting chemotaxis transducer protein CKL_1126 1176921 - 1176508 - | universal stress protein TERM 1487 1176950 - 1176969 + r 72 -6.6 -4.16301 | overlap 1176966 TTTTCAATAATATGT TATATAAG AGTT CTTATATA TTTATATCTACTGTA CKL_1127 1177434 - 1177024 - | universal stress protein CKL_1128 1178069 - 1177605 - | hypothetical protein CKL_1129 1178413 - 1178979 + | hypothetical protein CKL_1130 1179525 - 1179268 - | hypothetical protein CKL_1131 1179973 - 1181106 + | hypothetical protein TERM 1488 1181142 - 1181120 - f 72 -6.4 -4.28369 | opp_overlap 1181120, overlap 1181117 AAGAATTTAAAATAA GGAAGTTA TAAAAAT TAACTTCC TTTATTAGTCTATTG TERM 1489 1181120 - 1181142 + F 72 -6.4 -4.329 | opp_overlap 1181120 1181117 AAGAATTTAAAATAA GGAAGTTA TAAAAAT TAACTTCC TTTATTAGTCTATTG TERM 1490 1181387 - 1181406 + F 70 -6.6 -3.95836 | GCGTTTATGGTATCA CTTATAAA TTTT TTTATAAG TTCTGTTTTAAAGCT CKL_1132 1181903 - 1182073 + | hypothetical protein TERM 1491 1182560 - 1182545 - g 76 -6.2 -4.61147 | CAATATCATAGAAAA TGTAGT AAAA ACTACA AATCAAACAGAAAAC CKL_1133 1182297 - 1182929 + | methyl-accepting chemotaxis protein CKL_1134 1183140 - 1183301 + | hypothetical protein CKL_1135 1183298 - 1185199 + | hypothetical protein CKL_1136 1185514 - 1185783 + | hypothetical protein TERM 1492 1185879 - 1185911 + F 72 -5.1 -4.84761 | gap 1, opp_overlap 1185870 1185879 1185881 1185882 1185886, overlap 1185882 ATAAAATATTTATAA TAGCAAAGTACTTG TGTATT CAGGTACTTTG-TA TTTTTGTAGAAGTAT TERM 1493 1185882 - 1185909 + F 87 -9.3 -4.04397 | opp_overlap 1185882 1185881 1185879 1185886, overlap 1185879 AAATATTTATAATAG CAAAGTACTTG TGTATT CAGGTACTTTG TATTTTTGTAGAAGT CKL_1137 1186072 - 1186272 + | hypothetical protein TERM 1494 1186341 - 1186301 - f 100 -18.9 -4.62163 | opp_overlap 1186301 1186307 1186313, overlap 1186313 AGATAAAAATAGAAA TATAAATAAAAAGAAGTTT AAA AAACTTCTTTTTATTTATA TAAATTTGGATTTTC TERM 1495 1186301 - 1186341 + F 100 -18.9 -2.706 | opp_overlap 1186301 1186313, overlap 1186307 1186313 AGATAAAAATAGAAA TATAAATAAAAAGAAGTTT AAA AAACTTCTTTTTATTTATA TAAATTTGGATTTTC TERM 1496 1186307 - 1186335 + F 100 -13.5 -4.11295 | opp_overlap 1186301 1186313, overlap 1186301 1186313 AAATAGAAATATAAA TAAAAAGAAGTTT AAA AAACTTCTTTTTA TTTATATAAATTTGG TERM 1497 1186329 - 1186313 - f 95 -8.1 -5.48623 | opp_overlap 1186307 1186301 1186313, overlap 1186301 AAATATAAATAAAAA GAAGTTT AAA AAACTTC TTTTTATTTATATAA TERM 1498 1186313 - 1186329 + F 95 -8.1 -5.42975 | opp_overlap 1186313 1186301, overlap 1186307 1186301 AAATATAAATAAAAA GAAGTTT AAA AAACTTC TTTTTATTTATATAA TERM 1499 1187087 - 1187049 - g 80 -6.2 -4.84311 | opp_overlap 1187049 CTGTATATAATAAAA CTAATGGAATATTAGATT TTA ACTCTATTATTACATTAG GACTGCTTGCATCTG CKL_1138 1186595 - 1187185 + | hypothetical protein TERM 1500 1187567 - 1187543 - g 77 -10.1 -2.72799 | opp_overlap 1187546, overlap 1187540 1187546 GTGGTAGATACATTA GAACAACAGCT TAA AGATGTTGTTC ATAAAATTTGATGTT CKL_1139 1187198 - 1187578 + | hypothetical protein CKL_1140 1187606 - 1189816 + | cation-transporting ATPase CKL_1141 1189817 - 1190650 + | hypothetical protein CKL_1142 1190683 - 1190970 + | hypothetical protein TERM 1501 1190987 - 1191018 + F 95 -8 -5.43553 | opp_overlap 1190986, overlap 1190990 CAAGCTTTAGATAAG GTGGTTCCCCGTGA AATT TTATGGGGAGCTGC TTTTATTTTTTAAAT TERM 1502 1190990 - 1191015 + F 73 -8.3 -3.47289 | opp_overlap 1190986, overlap 1190987 GCTTTAGATAAGGTG GTTCCCCGTGA AATT TTATGGGGAGC TGCTTTTATTTTTTA CKL_1143 1191222 - 1191905 + | transporter protein TERM 1503 1191899 - 1191915 + F 70 -8.1 -3.04517 | opp_overlap 1191898 1191899, overlap 1191898 TGGATGGGAAGTAAG CCAATAA TAT TTATTGG ATTTTGAGAGGAGAT dut 1191937 - 1192368 + | hypothetical protein TERM 1504 1192425 - 1192391 - T 100 -14.6 -3.81146 | opp_overlap 1192391 TTTTTTAATTAAGAA TTAAGAGTGAGGAATA TGG TATTCTTCACTCTTAA TTTAAATCTTTGCAA TERM 1505 1192391 - 1192425 + T 100 -16.8 -3.81137 | opp_overlap 1192391 TTTTTTAATTAAGAA TTAAGAGTGAGGAATA TGG TATTCTTCACTCTTAA TTTAAATCTTTGCAA CKL_1145 1193177 - 1192443 - | hydrolase TERM 1506 1193136 - 1193110 - G 71 -3.1 -5.27779 | gap 1 TCGAATATTAAAAAA TGGTT-TGAAGT TTCT ACTGCAAAACCA CTGTGATATAAATAA gloA 1193281 - 1193646 + | hypothetical protein ssb1 1193732 - 1194064 + | Ssb1 CKL_1148 1194352 - 1194687 + | hypothetical protein TERM 1507 1195529 - 1195498 - g 80 -9 -3.65036 | CTAAGGAAAGTATAA TTGTACAATCAT CTACTGCT ATGATTGTACAA GCAAATAAATTGCCT flaB 1194738 - 1195580 + | FlaB TERM 1508 1195596 - 1195646 + F 100 -24.8 -3.12595 | opp_overlap 1195589 1195600 1195608 1195643, overlap 1195589 1195600 1195608 1195643 TACTTAAATTTAGCG TAAATATATAAAGGATACTTATTT AAA AAATAAGTATCCTTTATATATTTA TATTAAATGATTAGA TERM 1509 1195600 - 1195642 + F 100 -21.2 -4.22009 | opp_overlap 1195600 1195608, overlap 1195596 1195608 TAAATTTAGCGTAAA TATATAAAGGATACTTATTT AAA AAATAAGTATCCTTTATATA TTTATATTAAATGAT TERM 1510 1195642 - 1195600 - f 100 -21.2 -3.62864 | opp_overlap 1195600 1195596 1195608, overlap 1195608 TAAATTTAGCGTAAA TATATAAAGGATACTTATTT AAA AAATAAGTATCCTTTATATA TTTATATTAAATGAT TERM 1511 1195634 - 1195608 - f 100 -14 -4.27886 | opp_overlap 1195608 1195600 1195596, overlap 1195600 GCGTAAATATATAAA GGATACTTATTT AAA AAATAAGTATCC TTTATATATTTATAT TERM 1512 1195608 - 1195634 + F 100 -14 -4.3207 | opp_overlap 1195600 1195608, overlap 1195600 1195596 GCGTAAATATATAAA GGATACTTATTT AAA AAATAAGTATCC TTTATATATTTATAT flgB 1195900 - 1196301 + | flagellar basal body rod protein FlgB flgC 1196314 - 1196745 + | flagellar basal body rod protein FlgC fliE 1196757 - 1197065 + | flagellar hook-basal body protein FliE fliF 1197081 - 1198664 + | flagellar MS-ring protein fliG 1198670 - 1199686 + | flagellar motor switch protein G fliH 1199670 - 1200434 + | hypothetical protein fliI 1200465 - 1201784 + | hypothetical protein fliJ 1201823 - 1202260 + | hypothetical protein CKL_1158 1202311 - 1203795 + | flagellar hook-length control protein TERM 1513 1203935 - 1203909 - g 70 -8.1 -3.1203 | CAAGTATTCAAGAGA CATCAGATGAA AATAA TACATCTGATG ATACCCCAAAATATT flgD 1203824 - 1204621 + | hypothetical protein flgE 1204854 - 1205900 + | hypothetical protein TERM 1514 1205968 - 1205922 - f 70 -6.3 -4.13767 | gap 1, opp_overlap 1205922 GTTTTTAGTTTAAAA TATGTTGAC-TTTAAGATAAAT AATT ATTTATCTTATATGTCAATATA TTTTAAAAACTGAGT TERM 1515 1205922 - 1205968 + F 81 -8.5 -4.09864 | gap 1, opp_overlap 1205922 GTTTTTAGTTTAAAA TATGTTGAC-TTTAAGATAAAT AATT ATTTATCTTATATGTCAATATA TTTTAAAAACTGAGT CKL_1161 1206153 - 1206335 + | flagellar protein TERM 1516 1206851 - 1206837 - g 74 -5.8 -4.62163 | ATATAAAAATAGAAA TTATTC AAA GAATAA ATCCAATGCTGGAAA fliL 1206392 - 1206913 + | hypothetical protein fliO 1206962 - 1207375 + | hypothetical protein fliP 1207365 - 1208141 + | flagellar biosynthesis protein FliP fliQ 1208152 - 1208421 + | hypothetical protein CKL_1166 1208502 - 1210322 + | bifunctional flagellar biosynthesis protein FliR/FlhB flhA 1210328 - 1212394 + | flagellar biosynthesis protein FlhA TERM 1517 1212686 - 1212658 - g 82 -7.6 -4.35361 | GATAATAAAATCAAA GATACAACTTTA GATGA TAAAGCTGTACC AAATAATATTATAAA flhF 1212394 - 1213587 + | flagellar biosynthesis regulator FlhF fleN 1213581 - 1214456 + | FleN CKL_1170 1214512 - 1215237 + | RNA polymerase sigma factor TERM 1518 1215511 - 1215499 - g 81 -4.1 -5.69793 | ATATGAAAGAAAAAA TCCAG CTG CTGAA GTAATGCTTTATAAT CKL_1171 1215278 - 1215838 + | hypothetical protein TERM 1519 1216176 - 1216156 - g 79 -6.9 -4.68994 | opp_overlap 1216156 AGGACGACTTAAAAA GTACCCCAT TTA ATGAAGTAC TTATACAGAATTATG flgG1 1216035 - 1216802 + | flagellar basal body rod protein FlgG TERM 1520 1217537 - 1217547 + G 74 -6.8 -4.27316 | opp_overlap 1217544 1217546 ACAGATATGATATTG GCTC AAA GAGC TTTTGCCTTGGGGGC TERM 1521 1217567 - 1217547 - g 74 -9.8 -2.60813 | overlap 1217546 1217544 TATTGGCTCAAAGAG CTTTTGCC TTGGG GGCAAAAG GGCTTACCACCGCTG flgG2 1216835 - 1217620 + | flagellar basal body rod protein FlgG CKL_1174 1217691 - 1218116 + | hypothetical protein TERM 1522 1218168 - 1218113 - f 100 -25.4 -2.90797 | opp_overlap 1218118 1218126 1218164, overlap 1218118 1218126 1218164 GTCAGATATACGAGA TTAAATATATAAAGGACCTGAAAAAG CATA CTTTTTCAGGTCCTTTATATATTTTA AACTAAAAATTGCTT TERM 1523 1218163 - 1218118 - f 100 -25.3 -3.88062 | opp_overlap 1218118 1218126, overlap 1218113 1218126 ATATACGAGATTAAA TATATAAAGGACCTGAAAAAG CATA CTTTTTCAGGTCCTTTATATA TTTTAAACTAAAAAT TERM 1524 1218118 - 1218163 + F 100 -25.3 -4.13945 | opp_overlap 1218113 1218118 1218126, overlap 1218126 ATATACGAGATTAAA TATATAAAGGACCTGAAAAAG CATA CTTTTTCAGGTCCTTTATATA TTTTAAACTAAAAAT TERM 1525 1218126 - 1218155 + F 100 -18.1 -4.33956 | opp_overlap 1218126 1218118 1218113, overlap 1218118 GATTAAATATATAAA GGACCTGAAAAAG CATA CTTTTTCAGGTCC TTTATATATTTTAAA TERM 1526 1218155 - 1218126 - f 100 -18.1 -4.29493 | opp_overlap 1218118 1218126, overlap 1218118 1218113 GATTAAATATATAAA GGACCTGAAAAAG CATA CTTTTTCAGGTCC TTTATATATTTTAAA CKL_1175 1218320 - 1218991 + | flagellar protein TERM 1527 1218997 - 1219025 + T 83 -7.5 -4.74917 | opp_overlap 1218999, overlap 1218998 1218999 ACAGGATTAAAGCAT AATGCAGGTTATT ATT AATAACCTGCAAG TTTTATATATTTGGT TERM 1528 1218998 - 1219024 + T 90 -11 -3.43323 | opp_overlap 1218999, overlap 1218997 1218999 CAGGATTAAAGCATA ATGCAGGTTATT ATT AATAACCTGCAA GTTTTATATATTTGG TERM 1529 1219023 - 1218999 - T 100 -14.5 -3.63251 | opp_overlap 1218998 1218997 1218999 AGGATTAAAGCATAA TGCAGGTTATT ATT AATAACCTGCA AGTTTTATATATTTG TERM 1530 1218999 - 1219023 + T 100 -14.5 -2.64909 | opp_overlap 1218999, overlap 1218998 1218997 AGGATTAAAGCATAA TGCAGGTTATT ATT AATAACCTGCA AGTTTTATATATTTG ppaC 1220678 - 1219044 - | putative manganese-dependent inorganic pyrophosphatase TERM 1531 1219150 - 1219160 + g 70 -4 -4.99035 | ACTCCAAAAGCCTTG GATA CAA TATC TTTTTGTGTACCTGC TERM 1532 1219615 - 1219631 + g 89 -10.9 -3.61244 | opp_overlap 1219612, overlap 1219611 GAGGCTACTATAGTT CCTGTAG ATC CTACAGG TTCATTTCTAAAGTA TERM 1533 1221016 - 1221006 - g 77 -3.2 -5.56263 | ACTAGAAAATAAAAA GAGA ATA TCCC CAGTAAAAATATTTC TERM 1534 1222463 - 1222447 - g 78 -9.5 -3.21276 | opp_overlap 1222436, overlap 1222445 CTGGCGGGTATAAGA CCTGTTA TGA TAACAGG AGATCATAAAAATAC TERM 1535 1222491 - 1222476 - g 76 -5.4 -4.95758 | AGGAGATCATAAAAA TACGGC TTTT GCCATA GGAAAAGAATTAAAT CKL_1177 1220911 - 1223451 + | cation-transporting ATPase TERM 1536 1223510 - 1223452 - T 100 -16.6 -3.95378 | opp_overlap 1223452 1223454, overlap 1223436 1223454 1223467 TTATACTTTAAATAA TATTTAAATAATAAATGCAGGAATTG TTTTTTG CAATTCCTGCATCCATTATTTAAATC TCTTTATTTTTTGTA TERM 1537 1223452 - 1223510 + T 100 -12.9 -4.17307 | opp_overlap 1223436 1223452 1223454 1223467, overlap 1223454 TTATACTTTAAATAA TATTTAAATAATAAATGCAGGAATTGT TTTTT GCAATTCCTGCATCCATTATTTAAATC TCTTTATTTTTTGTA TERM 1538 1223508 - 1223454 - T 100 -19.2 -3.56347 | opp_overlap 1223454 1223452, overlap 1223436 1223452 1223467 ATACTTTAAATAATA TTTAAATAATAAATGCAGGAATTG TTTTTTG CAATTCCTGCATCCATTATTTAAA TCTCTTTATTTTTTG TERM 1539 1223454 - 1223508 + T 100 -15.5 -3.63489 | opp_overlap 1223436 1223452 1223454 1223467, overlap 1223452 ATACTTTAAATAATA TTTAAATAATAAATGCAGGAATTGT TTTTT GCAATTCCTGCATCCATTATTTAAA TCTCTTTATTTTTTG TERM 1540 1223495 - 1223467 - T 100 -11.9 -4.58585 | opp_overlap 1223454 1223452, overlap 1223454 1223452 TATTTAAATAATAAA TGCAGGAATTG TTTTTTG CAATTCCTGCA TCCATTATTTAAATC CKL_1178 1223904 - 1223500 - | hypothetical protein TERM 1541 1225392 - 1225419 + G 76 -7.1 -4.21462 | opp_overlap 1225392 1225404 TTAAAGGCAAATGGA GGCTGCTTA ATACTTAGGG TAAGCAGCC TTTTAAATAATAAAT TERM 1542 1225703 - 1225684 - g 77 -3 -5.56573 | gap 1, opp_overlap 1225684 1225687, overlap 1225686 1225687 ATAAAGAAACAAAAA TATCTTTTC TAG GAAAAG-TA TTTTCCATATGCAGG TERM 1543 1225687 - 1225701 + G 70 -7.2 -3.71913 | opp_overlap 1225686 1225684 1225687, overlap 1225684 AAGAAACAAAAATAT CTTTTC TAG GAAAAG TATTTTCCATATGCA CKL_1179 1224321 - 1226633 + | protease La-related protein TERM 1544 1226695 - 1226639 - T 75 -7 -4.18187 | gap 1, opp_overlap 1226646 1226647 1226650 1226653, overlap 1226648 1226653 1226688 AAATAGATAAAAATA TGTGTGAA-ATATAATTGACAATGTAC GCAT GTTCATTGTCAATTATACATTTAAACA TTAAATCTGAAATGG TERM 1545 1226646 - 1226687 + T 71 -7.5 -3.61268 | opp_overlap 1226639 1226648 1226653, overlap 1226647 1226650 1226653 TAAAAATATGTGTGA AATATAATTGACAATGTAC GCAT GTTCATTGTCAATTATACA TTTAAACATTAAATC TERM 1546 1226647 - 1226686 + T 84 -11 -2.7644 | opp_overlap 1226639 1226648 1226653, overlap 1226646 1226650 1226653 AAAAATATGTGTGAA ATATAATTGACAATGTAC GCAT GTTCATTGTCAATTATAC ATTTAAACATTAAAT TERM 1547 1226685 - 1226648 - T 100 -14.5 -3.58731 | opp_overlap 1226647 1226646 1226650 1226653, overlap 1226639 1226653 AAAATATGTGTGAAA TATAATTGACAATGTAC GCAT GTTCATTGTCAATTATA CATTTAAACATTAAA TERM 1548 1226650 - 1226683 + T 100 -12.7 -2.65279 | opp_overlap 1226648 1226639 1226653, overlap 1226647 1226646 1226653 AATATGTGTGAAATA TAATTGACAATGTAC GCAT GTTCATTGTCAATTA TACATTTAAACATTA TERM 1549 1226680 - 1226653 - T 89 -10 -3.81755 | opp_overlap 1226650 1226647 1226646 1226653, overlap 1226648 1226639 ATGTGTGAAATATAA TTGACAATGTAC GCAT GTTCATTGTCAA TTATACATTTAAACA TERM 1550 1226653 - 1226680 + T 85 -10 -3.47349 | opp_overlap 1226653 1226648 1226639, overlap 1226650 1226647 1226646 ATGTGTGAAATATAA TTGACAATGTAC GCAT GTTCATTGTCAA TTATACATTTAAACA CKL_1180 1227786 - 1226689 - | translation-associated GTPase TERM 1551 1227334 - 1227346 + g 82 -6.3 -5.08086 | TGCATCTTTATTTCC GCTTT TAG AAAGC TTTTGTATTTTTTCT TERM 1552 1227696 - 1227721 + g 70 -6.1 -4.33248 | gap 1, opp_overlap 1227696 CTATAGTGCAAAAAG GGTAGTTGGCAG ATT CTGCCC-CTGCC TTTGTTATGGCATTG TERM 1553 1228660 - 1228634 - g 83 -6.6 -4.7416 | TTAAAATTTCAAAAA GAAGGTCATCCT GCA AAGAGAACCTTC CAGGCCATACGTATA mraW 1228046 - 1228975 + | S-adenosyl-methyltransferase MraW CKL_1182 1229003 - 1229494 + | hypothetical protein ftsI 1229501 - 1231348 + | hypothetical protein TERM 1554 1232821 - 1232805 - g 100 -8.1 -5.86965 | opp_overlap 1232805 AGGTATTAAAAAAAA CAATTAC ATT GTAATTG AAAATAGAAAAGAAG murE 1231537 - 1232994 + | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase TERM 1555 1233049 - 1232995 - f 90 -11 -3.55304 | opp_overlap 1233009, overlap 1232991 1233002 1233005 ACAGTTAACAATTAA CAATTAACAATTCACAATGCACGATT CAC AATTGTGAACTGTGAATCGTGAACTG TGAATTGAAAAAGAG TERM 1556 1233056 - 1233002 - f 100 -24.8 -3.58932 | opp_overlap 1233009, overlap 1232991 1232995 1233005 ACAATTAACAATTAA CAATTCACAATGCACGATTCACAATT GTG AACTGTGAATCGTGAACTGTGAATTG AAAAAGAGGTGTTGG TERM 1557 1233053 - 1233005 - f 100 -20.7 -3.90559 | opp_overlap 1233009, overlap 1232991 1232995 1233002 ATTAACAATTAACAA TTCACAATGCACGATTCACAATT GTG AACTGTGAATCGTGAACTGTGAA TTGAAAAAGAGGTGT TERM 1558 1233009 - 1233049 + F 87 -11.3 -2.52464 | opp_overlap 1232991 1232995 1233005 1233002 ACAATTAACAATTCA CAATGCACGATTCACAATT GTG AACTGTGAATCGTGAACTG TGAATTGAAAAAGAG TERM 1559 1234055 - 1234028 - g 76 -6.4 -4.55887 | overlap 1234030 TGTTAAAAATATAAA GCTTACTTCCAT GAGA ATGGAAATAATC AGGAAAAAAGAATTT murF 1233075 - 1234466 + | hypothetical protein TERM 1560 1234941 - 1234957 + G 72 -5.9 -4.49981 | GATACCTGGGATCTG GGAGTAT TTT ATATTCC TTTTATAATAGTGTA mraY 1234500 - 1235453 + | phospho-N-acetylmuramoyl-pentapeptide-transferase ftsW 1235525 - 1236643 + | hypothetical protein TERM 1561 1236641 - 1236679 + F 100 -15.7 -2.98653 | opp_overlap 1236637 1236648, overlap 1236637 1236643 1236645 CAAAGCAAATATGGT TAGATTATGGCATTACA AAATC TGTAATGCTATAATCTA TATAATTAATATTTT TERM 1562 1236643 - 1236677 + F 100 -13.9 -3.03212 | opp_overlap 1236637 1236648, overlap 1236641 1236637 1236645 AAGCAAATATGGTTA GATTATGGCATTACA AAATC TGTAATGCTATAATC TATATAATTAATATT TERM 1563 1236645 - 1236675 + F 88 -10.7 -3.06361 | opp_overlap 1236637 1236648, overlap 1236643 1236641 1236637 GCAAATATGGTTAGA TTATGGCATTACA AAATC TGTAATGCTATAA TCTATATAATTAATA ftsQ 1236820 - 1237590 + | hypothetical protein TERM 1564 1237961 - 1237982 + G 72 -8.9 -2.65264 | CAGATAGTAAGCTCT TTACCAATA ATAA TATTGGTAA TCATATAACTGATAA CKL_1189 1237606 - 1238322 + | division initiation protein CKL_1190 1238338 - 1238679 + | hypothetical protein CKL_1191 1238690 - 1239415 + | division initiation protein CKL_1192 1239572 - 1240240 + | hypothetical protein CKL_1193 1240253 - 1240705 + | hypothetical protein CKL_1194 1240735 - 1241013 + | hypothetical protein TERM 1565 1241069 - 1241093 + G 100 -13.1 -2.74597 | opp_overlap 1241069, overlap 1241066 ACTTTTTTAAGTAAA TTTCACTTTCA TAA TGAAAGTGAAA TACTATCTATATACG TERM 1566 1241093 - 1241069 - g 100 -13.1 -3.90291 | opp_overlap 1241069 1241066 ACTTTTTTAAGTAAA TTTCACTTTCA TAA TGAAAGTGAAA TACTATCTATATACG CKL_1195 1241042 - 1241818 + | hypothetical protein CKL_1196 1241834 - 1242556 + | cell-division initiation protein TERM 1567 1242585 - 1242562 - f 77 -3.1 -5.70829 | opp_overlap 1242563 1242565, overlap 1242551 1242563 AAGAGGATAAAAAAA GGCCACTCT GAAATT AGAGTGACT TTTTTATTTCCAAGG TERM 1568 1242584 - 1242563 - f 70 -6.6 -4.00057 | opp_overlap 1242563 1242565, overlap 1242562 1242551 AGAGGATAAAAAAAG GCCACTCT GAAATT AGAGTGAC TTTTTTATTTCCAAG TERM 1569 1242563 - 1242584 + F 83 -5.1 -5.63517 | opp_overlap 1242563 1242562 1242551, overlap 1242565 AGAGGATAAAAAAAG GCCACTCTG AAAT TAGAGTGAC TTTTTTATTTCCAAG CKL_1197 1242682 - 1243374 + | 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase CKL_1198 1243602 - 1244057 + | signal peptidase CKL_1199 1244047 - 1244964 + | pseudouridine synthase TERM 1570 1244954 - 1245003 + T 86 -7.4 -5.01042 | opp_overlap 1244955 1244960, overlap 1244955 1244960 TAGATATTTTATCTA ATGAAAGATGAAGTGTGTAAAT ATTTAA ATCCACACACTTCATCTTTTAA TTTTTAGTTTGAATT TERM 1571 1245002 - 1244955 - T 100 -13.1 -3.07622 | opp_overlap 1244954 1244955 1244960, overlap 1244960 AGATATTTTATCTAA TGAAAGATGAAGTGTGTAAAT ATTTAA ATCCACACACTTCATCTTTTA ATTTTTAGTTTGAAT TERM 1572 1244955 - 1245002 + T 90 -10.9 -3.58998 | opp_overlap 1244955 1244960, overlap 1244954 1244960 AGATATTTTATCTAA TGAAAGATGAAGTGTGTAAAT ATTTAA ATCCACACACTTCATCTTTTA ATTTTTAGTTTGAAT TERM 1573 1244997 - 1244960 - T 100 -13 -3.93288 | opp_overlap 1244955 1244954 1244960, overlap 1244955 TTTTATCTAATGAAA GATGAAGTGTGTAAAT ATTTAA ATCCACACACTTCATC TTTTAATTTTTAGTT TERM 1574 1244960 - 1244997 + T 90 -8.6 -4.81523 | opp_overlap 1244960 1244955, overlap 1244955 1244954 TTTTATCTAATGAAA GATGAAGTGTGTAAAT ATTTAA ATCCACACACTTCATC TTTTAATTTTTAGTT pyrP 1246299 - 1245007 - | PyrP pyrR 1246863 - 1246330 - | pyrimidine regulatory protein PyrR TERM 1575 1246467 - 1246488 + g 88 -8.9 -4.19238 | opp_overlap 1246471 TATGACCTCTATCTA TTAATACAG CCAG CTGTATTAA TTTTGGCCTTCCAGA TERM 1576 1246583 - 1246602 + g 74 -2.2 -5.60993 | gap 1, overlap 1246585 1246587 ATTATTTTTTTATCT TCTACATCT ATT GGATGT-GA TTTTTTTATGGCAGG TERM 1577 1246924 - 1246903 - R 100 -6.6 -5.72053 | gap 1 TAATTAAATAAAAAA GCCCTTCTC CAAAC GAGA-GGGC ATAGAAGTATCTATT CKL_1202 1248791 - 1247046 - | hypothetical protein TERM 1578 1249407 - 1249397 - g 75 -2.6 -5.67529 | opp_overlap 1249397 AATTAAAAATAAAAA TTAT ATT ATAA CTACTTTATTTATGG dapF 1248948 - 1249772 + | diaminopimelate epimerase CKL_1204 1249772 - 1250857 + | hypothetical protein TERM 1579 1250867 - 1250892 + F 71 -2.6 -5.4593 | opp_overlap 1250861, overlap 1250850 AATTAATAATAAAAA GTACTGTGAA AATTTA TTTACTGTAC TTTTTATTATTTTAA TERM 1580 1251748 - 1251730 - g 86 -3.2 -6.21477 | overlap 1251733 AAGATGAAAAAAAAA TAAGAAAT ATG ATTTCTAA AGGTCATGGACTCAT TERM 1581 1251745 - 1251733 - g 75 -4.9 -5.11718 | overlap 1251730 ATGAAAAAAAAATAA GAAAT ATG ATTTC TAAAGGTCATGGACT TERM 1582 1252374 - 1252358 - g 76 -5.3 -5.03715 | AGGATGTTTAAAAAA TAATATT GCT AATATTA GAGAAAAGGTTAAAC exeE2 1250985 - 1252481 + | ExeE2 exeF4 1252705 - 1253691 + | ExeF4 CKL_1207 1253794 - 1254204 + | hypothetical protein CKL_1208 1254235 - 1254684 + | hypothetical protein CKL_1209 1254665 - 1255156 + | hypothetical protein CKL_1210 1255191 - 1255622 + | hypothetical protein CKL_1211 1255679 - 1256023 + | hypothetical protein CKL_1212 1256027 - 1256764 + | hypothetical protein CKL_1213 1256832 - 1257275 + | hypothetical protein CKL_1214 1257306 - 1257716 + | hypothetical protein TERM 1583 1258587 - 1258577 - g 74 -4 -5.21709 | TTTTATATGAAAAAA TTAG GAG CTAA AGAGTTGTCTTTTCC pepQ 1258046 - 1259122 + | PepQ efp 1259385 - 1259942 + | elongation factor P TERM 1584 1260183 - 1260171 - g 70 -6.3 -4.25056 | overlap 1260167 GATTGTATGAATAAA GATCT GGC AGATC TTCAAGATAACTTAT CKL_1217 1259982 - 1260380 + | hypothetical protein TERM 1585 1260460 - 1260431 - f 100 -9.4 -5.252 | opp_overlap 1260431 CATTCGGATAAAAAA TACCACCAAGGT TCATGG ATCTTGGTGGTA TTTTTTATTTTTTTA TERM 1586 1260431 - 1260460 + F 100 -12.3 -6.12458 | opp_overlap 1260431 CATTCGGATAAAAAA TACCACCAAGGTT CATG GATCTTGGTGGTA TTTTTTATTTTTTTA CKL_1218 1260541 - 1261458 + | stage III sporulation protein AA CKL_1219 1261461 - 1261979 + | stage III sporulation protein SpoAB CKL_1220 1262045 - 1262242 + | stage III sporulation protein AC CKL_1221 1262252 - 1262635 + | stage III sporulation protein AD TERM 1587 1262668 - 1262653 - g 72 -4.8 -4.81083 | GTTAATTATGAAAAA TAGTAT ATTG ATACTA ACTATAGTTTTATTA CKL_1222 1262645 - 1263853 + | stage III sporulation protein AE CKL_1223 1263869 - 1264465 + | stage III sporulation protein AF CKL_1224 1264481 - 1265128 + | stage III sporulation protein AG TERM 1588 1265483 - 1265469 - g 75 -2.8 -5.62219 | AAGAGATCAAAAAAA TGCAGA GAC TCTTCA AACCTTAAAAAATTT CKL_1225 1265224 - 1265772 + | stage III sporulation protein AH CKL_1226 1265937 - 1266335 + | alkaline shock protein TERM 1589 1266371 - 1266338 - f 86 -9 -4.43681 | opp_overlap 1266344, overlap 1266344 TATGGAAGAGTAAAA TACTAACACCCTCT ATATTA AGAGGGTGTTTATA TTTAATGCATGTATT TERM 1590 1266344 - 1266365 + F 91 -10.2 -4.36903 | opp_overlap 1266338 1266344 AGAGTAAAATACTAA CACCCTCT ATATTA AGAGGGTG TTTATATTTAATGCA TERM 1591 1266365 - 1266344 - f 86 -10.2 -3.56568 | opp_overlap 1266344, overlap 1266338 AGAGTAAAATACTAA CACCCTCT ATATTA AGAGGGTG TTTATATTTAATGCA TERM 1592 1266428 - 1266459 + F 73 -9 -2.75498 | opp_overlap 1266428 1266430 1266432, overlap 1266427 1266430 ATATTTGCATATAGA TATACTTGAACTAG TATA TTAGTTTAAGTATA ATTATATCTGAAATG nusB 1266521 - 1266991 + | hypothetical protein xseA 1267012 - 1268214 + | exodeoxyribonuclease VII large subunit xseB 1268230 - 1268448 + | hypothetical protein fps 1268473 - 1269354 + | Fps TERM 1593 1270068 - 1270054 - g 82 -2.8 -5.90981 | overlap 1270056 GTACATTAAAAAAAA TACCTA ATA TAGGGA AAGGTATGGCTAAAT TERM 1594 1270066 - 1270056 - g 71 -5.4 -4.59226 | overlap 1270054 ACATTAAAAAAAATA CCTA ATA TAGG GAAAGGTATGGCTAA dxs 1269417 - 1271291 + | 1-deoxy-D-xylulose-5-phosphate synthase TERM 1595 1271340 - 1271360 + G 72 -3.4 -5.14563 | AGGAAAGAATAGATG TACTTTTA GTAGA TAAAGGTA TTTTTTCCTCACGAG CKL_1232 1271312 - 1272136 + | rRNA methylase ppnK 1272133 - 1272984 + | PpnK CKL_1234 1272981 - 1273433 + | arginine repressor recN 1273445 - 1275142 + | hypothetical protein CKL_1236 1275348 - 1276448 + | stage IV sporulation protein B TERM 1596 1276550 - 1276504 - f 95 -11.2 -4.23434 | opp_overlap 1276510 1276517, overlap 1276507 1276509 1276510 GAAAATATGGTAAAA TAATATTGTAAAAGATAGCATT TTA AATGCTATCTTTTACATTTATA TCATTAAGATAAATA TERM 1597 1276547 - 1276507 - f 100 -12.9 -4.2142 | opp_overlap 1276510 1276517, overlap 1276504 1276509 1276510 AATATGGTAAAATAA TATTGTAAAAGATAGCATT TTA AATGCTATCTTTTACATTT ATATCATTAAGATAA TERM 1598 1276545 - 1276509 - f 100 -15.5 -3.69506 | opp_overlap 1276510 1276517, overlap 1276507 1276504 1276510 TATGGTAAAATAATA TTGTAAAAGATAGCATT TTA AATGCTATCTTTTACAT TTATATCATTAAGAT TERM 1599 1276544 - 1276510 - f 100 -19 -2.80981 | opp_overlap 1276510 1276517, overlap 1276509 1276507 1276504 ATGGTAAAATAATAT TGTAAAAGATAGCATT TTA AATGCTATCTTTTACA TTTATATCATTAAGA TERM 1600 1276510 - 1276544 + F 100 -19 -4.1347 | opp_overlap 1276510 1276509 1276507 1276504, overlap 1276517 ATGGTAAAATAATAT TGTAAAAGATAGCATT TTA AATGCTATCTTTTACA TTTATATCATTAAGA TERM 1601 1276517 - 1276537 + F 95 -11.3 -4.41177 | opp_overlap 1276510 1276509 1276507 1276504, overlap 1276510 AATAATATTGTAAAA GATAGCATT TTA AATGCTATC TTTTACATTTATATC TERM 1602 1276586 - 1276564 - f 80 -8 -4.24745 | overlap 1276575 1276576 TATCATTAAGATAAA TATATAAAAA ATT TTTTTATATA AAAAAGAAGGAAATA TERM 1603 1276591 - 1276575 - f 71 -2.4 -5.51046 | overlap 1276564 1276576 TAAATATATAAAAAA TTTTTT TATAT AAAAAA GAAGGAAATAAAATT TERM 1604 1277101 - 1277081 - g 70 -4 -5.08878 | AAGATATAAAGAAAA CTGTATCT TTTAT AGATGCAG GAGAAGTAAGGTTCC spo0A 1276669 - 1277484 + | Spo0A TERM 1605 1277496 - 1277528 + F 74 -5 -5.07567 | TTAAATCATTTAGGA TCTTCCGTTTATTT GCTGG ATATGAATGGAAGA TTTTTTGAGATATAA CKL_1238 1277694 - 1278215 + | ADP-ribose pyrophosphatase TERM 1606 1278748 - 1278770 + G 72 -5 -4.86822 | opp_overlap 1278746 1278751, overlap 1278751 TGTTACCACAAAATA TAATATACAT ACC ATGTATAATA TTTTCTTCTGTGCTT TERM 1607 1278767 - 1278751 - g 71 -6.7 -4.04187 | opp_overlap 1278751 1278748, overlap 1278746 TACCACAAAATATAA TATACAT ACC ATGTATA ATATTTTCTTCTGTG spoIIM 1278336 - 1278986 + | hypothetical protein CKL_1240 1278983 - 1279213 + | hypothetical protein xerD 1279237 - 1280115 + | hypothetical protein TERM 1608 1280675 - 1280656 - g 79 -5.1 -5.14563 | opp_overlap 1280659 CTGCCCATGAAAAAA TAATTCC AGTGGA GGAATTA TATAAAATGTGCAAG deoB 1280166 - 1281335 + | phosphopentomutase pdp 1281468 - 1282769 + | pyrimidine-nucleoside phosphorylase TERM 1609 1282793 - 1282822 + F 88 -7.9 -4.91852 | opp_overlap 1282793 CAAATTGTTATATGA GCGCTATCATTAC AAGT GTGATGTTAGTGC TTTATTTTTGATAAA CKL_1244 1282924 - 1283352 + | hypothetical protein CKL_1245 1283414 - 1283812 + | nucleotidyltransferase CKL_1246 1285224 - 1284073 - | methyl-accepting transducer TERM 1610 1284847 - 1284833 - G 70 -4.2 -5.05113 | GTCATATAAATAAAA GCACCC TCT GGATAC ATTTCAGCTAAGATT TERM 1611 1285681 - 1285705 + H 81 -8.1 -4.43859 | GATCTATATTGTTAA CTTAATTGATT ATA AATTAATTAAG TTTTATAGAATTCTG TERM 1612 1286349 - 1286329 - g 76 -6.2 -4.62069 | overlap 1286330 CCTGCATTTGAAAAA CTCTTTGG ATATA CCAAAGAA GAGCTTAAAAATTAT CKL_1247 1285747 - 1288026 + | response regulator-related protein CKL_1248 1288095 - 1288700 + | oxidoreductase CKL_1249 1289346 - 1288987 - | hypothetical protein TERM 1613 1289153 - 1289143 - G 77 -4 -5.48213 | CATTGAAAATAAAAA TACT ACA AGTA ACCATGTGTAATAGT CKL_1250 1289665 - 1290942 + | hypothetical protein CKL_1251 1290960 - 1291781 + | hypothetical protein TERM 1614 1291907 - 1291897 - g 79 -2.6 -5.71712 | opp_overlap 1291897 TGCCAGAGAAAAAAA TATA AAG TATA TTGTGGTAGCTTCTT TERM 1615 1292026 - 1292016 - g 74 -5.4 -4.74706 | overlap 1292018 CTGAAGAGGGAAAAA TGGA ATT TCCA GCAGATATTCGAAGT CKL_1252 1291820 - 1292368 + | hypothetical protein TERM 1616 1292385 - 1292413 + F 100 -7.6 -6.0427 | opp_overlap 1292369 ATTAAAAATTTTTAA TACAACAGTATC ATTTA GGTATTGTTGTA TTTTTTTTATATGCT TERM 1617 1292588 - 1292569 - g 74 -9.4 -2.69964 | overlap 1292566 CTTGGAAGTACAGTA GTTAAAGC GAAA GCTTTAAC TGAGGAGGATAAGCA dacA2 1292488 - 1293699 + | DacA2 TERM 1618 1294315 - 1294305 - g 77 -4 -5.37043 | AGGTGATATAAAAAA TAAG GTT CTTA AAAAAATACATTTTA cca 1293865 - 1295064 + | hypothetical protein scpA 1295055 - 1295819 + | segregation and condensation protein A scpB 1295824 - 1296402 + | segregation and condensation protein B TERM 1619 1296441 - 1296418 - T 95 -11.8 -3.12862 | opp_overlap 1296411 1296410 1296438, overlap 1296416 AGGAATTAGCTAATA CCCCCATCTT CTTA AAAATGGGGG ATGAGCATTATCGCC CKL_1257 1296965 - 1296501 - | hypothetical protein CKL_1258 1297749 - 1297207 - | hypothetical protein TERM 1620 1297951 - 1297920 - g 85 -4.7 -5.52986 | opp_overlap 1297924 1297939 1297940, overlap 1297921 1297924 ATGGGATTAAAAAAA GTAAGTATAATAA TATTTT TTATTATACTTAA TAATATATGTTGTTA TERM 1621 1297950 - 1297921 - g 77 -8.2 -3.90707 | opp_overlap 1297924 1297939 1297940, overlap 1297920 1297924 TGGGATTAAAAAAAG TAAGTATAATAA TATTTT TTATTATACTTA ATAATATATGTTGTT TERM 1622 1299005 - 1299033 + G 90 -11.2 -3.8482 | gap 1 GCATAGAATTTTTGG CTTCAGGGGTAAT GTAA ATT-CCCCTGAAG TTTCAATTGATTTTC CKL_1259 1297896 - 1299092 + | D-alanyl-D-alanine carboxypeptidase-related protein CKL_1260 1299581 - 1299105 - | hypothetical protein TERM 1623 1299548 - 1299562 + g 80 -5.8 -5.03747 | opp_overlap 1299548 1299550 TGCAGTATTTACAGA CATTTT TAA AAAATG TTTTTTCGGAAATTT CKL_1261 1300195 - 1299689 - | methyl-accepting protein CKL_1262 1300797 - 1300264 - | methyl-accepting protein TERM 1624 1300936 - 1300892 - H 88 -10.5 -3.62775 | opp_overlap 1300889 1300902 1300904 1300906 1300912 1300914 1300915 1300920 1300930, overlap 1300897 1300900 1300914 AGTATTTCCCAATAA TATAATAACATATACTATTAT ATT ATATTAGTATATACTATTATA ATAATATATTTATAT CKL_1263 1301293 - 1301706 + | sigma factor TERM 1625 1301813 - 1301866 + F 100 -10.9 -4.70453 | gap 1, opp_overlap 1301816, overlap 1301816 TTTATTTAAGGATTA TAATTT-TATATTAGAGTATAGATAG TAT TTACCTATACTCTAATATGGAAATTA TTTTATATGTTAGTT TERM 1626 1301862 - 1301816 - f 79 -9.1 -3.47494 | opp_overlap 1301813 1301816 ATTTAAGGATTATAA TTTTATATTAGAGTATAGATA GTATT TACCTATACTCTAATATGGAA ATTATTTTATATGTT TERM 1627 1301816 - 1301862 + F 95 -12 -3.24672 | opp_overlap 1301816, overlap 1301813 ATTTAAGGATTATAA TTTTATATTAGAGTATAGATAG TAT TTACCTATACTCTAATATGGAA ATTATTTTATATGTT rnfC 1301942 - 1303300 + | hypothetical protein rnfD 1303320 - 1304312 + | RnfD rnfG 1304401 - 1304949 + | RnfG rnfE 1304952 - 1305593 + | RnfE rnfA 1305593 - 1306174 + | RnfA rnfB 1306190 - 1307047 + | RnfB TERM 1628 1307091 - 1307056 - T 73 -9.1 -2.71763 | opp_overlap 1307061, overlap 1307031 1307061 TTCATAATTAGATGA TAAAACATGCTGCAG AAAAAA CTGCGGCATGTTTAA TTCCAACTGAACCTC TERM 1629 1307086 - 1307061 - T 88 -9 -4.5265 | opp_overlap 1307061, overlap 1307031 1307056 AATTAGATGATAAAA CATGCTGCAG AAAAAA CTGCGGCATG TTTAATTCCAACTGA TERM 1630 1307061 - 1307086 + T 95 -11.2 -3.91084 | opp_overlap 1307031 1307061 1307056 AATTAGATGATAAAA CATGCTGCAG AAAAAA CTGCGGCATG TTTAATTCCAACTGA CKL_1270 1307641 - 1307123 - | heptaprenyl diphosphate synthase-related protein CKL_1271 1308422 - 1307766 - | hypothetical protein TERM 1631 1308202 - 1308221 + g 93 -9.4 -4.60143 | opp_overlap 1308205 ATAAGTGGATTTACA GTATTTCC AGAA GGAAATAC TTTTATATGATATGT CKL_1272 1308985 - 1308518 - | hypothetical protein CKL_1273 1309096 - 1309920 + | hydrolase TERM 1632 1310196 - 1310222 + F 100 -14.6 -5.63236 | overlap 1310188 TGGCTAAGAAATTGG GCATTTCTTCCT AAA AGGGAGAAATGC TTTTTATTTTTGACT TERM 1633 1310281 - 1310313 + F 100 -10.8 -5.83226 | gap 1, opp_overlap 1310281 TGGTACCGCGGAAAA TACACTTCG-TCCCT TTTA AGGGATTGAAGTGTA TTTTTTTATTAACTT TERM 1634 1310313 - 1310281 - f 81 -8.6 -4.09685 | gap 1, opp_overlap 1310281 TGGTACCGCGGAAAA TACACTTC-GTCCCT TTTA AGGGATTGAAGTGTA TTTTTTTATTAACTT trpE 1310344 - 1311774 + | anthranilate synthase component I trpG 1311775 - 1312359 + | TrpG trpD 1312349 - 1313356 + | anthranilate phosphoribosyltransferase trpC 1313372 - 1314160 + | indole-3-glycerol-phosphate synthase trpF 1314192 - 1314791 + | hypothetical protein TERM 1635 1315466 - 1315454 - g 76 -3.4 -5.45726 | overlap 1315457 CAGATTTTAAAAAAA GAAG GAAAA CTTC CCAATTATATAATAG TERM 1636 1315467 - 1315457 - g 74 -5.4 -4.80853 | overlap 1315454 ATTTTAAAAAAAGAA GGAA AAC TTCC CAATTATATAATAGC trpB1 1314788 - 1315978 + | tryptophan synthase subunit beta trpA 1315997 - 1316788 + | tryptophan synthase subunit alpha CKL_1281 1316870 - 1317145 + | hypothetical protein CKL_1282 1317618 - 1317166 - | hypothetical protein TERM 1637 1317387 - 1317413 + g 82 -8.8 -4.09117 | ATATTATAAAAGTTG TGGCAGGAGT TTTTATC ACTCTTGCCA TTATTTCTGAATAGG TERM 1638 1317490 - 1317476 - G 70 -7.2 -3.62775 | AGCAGGCTGGAAGAA TTCACA TAG TGTGAA GAAAGAAGATAAAAA CKL_1283 1318385 - 1317615 - | hypothetical protein TERM 1639 1319344 - 1319355 + G 74 -5.8 -4.64861 | opp_overlap 1319343 TAATGCATATTATAG CTGC CAAG GCAG TTTGTTTTGGAGAAG glyA 1318548 - 1319783 + | hypothetical protein CKL_1285 1319939 - 1320184 + | hypothetical protein TERM 1640 1320716 - 1320706 - g 75 -2.6 -5.56264 | TGTAAAGATAAAAAA TTAT TGT ATAA ATCCTGTGGATTCCA TERM 1641 1322858 - 1322845 - g 90 -3.9 -5.91981 | AAAACTTAAAAAAAA TTATG GCAT CATAA ATAATATGATTAAAG TERM 1642 1323345 - 1323332 - g 71 -5.3 -4.7173 | TATGATACGGAAAAA GCTTT TAAA AAAGC AGGGGCTCAAGTAGA purL 1320299 - 1324072 + | hypothetical protein TERM 1643 1324106 - 1324128 + F 90 -5.6 -5.66229 | opp_overlap 1324106 TGTAGGTTATATAGA GATGAAGTGT AAA AAGCTTCATC TTTTTTATTATTCCT CKL_1287 1324201 - 1324908 + | ABC transporter ATPase CKL_1288 1324987 - 1325658 + | transporter protein TERM 1644 1326061 - 1326080 + G 74 -5.2 -4.79384 | GGATGTATTTAATTT TTATATTT ATGG AAATATAA TTTTAATTTTATTAT CKL_1289 1325660 - 1326400 + | hypothetical protein TERM 1645 1327606 - 1327594 - g 74 -7.7 -3.89354 | opp_overlap 1327604 TTTTCAAAGGAAGAA CTGCA ATT TGCAG CAGAGCAGTTTTATA CKL_1290 1326517 - 1327794 + | sensor kinase TERM 1646 1328184 - 1328164 - g 76 -6.2 -4.61566 | opp_overlap 1328164 1328166, overlap 1328157 TGCTAAAGGAGAAAA GACCTATA ATATA CATAGGTC TGTCCTCAGGAATAA TERM 1647 1328742 - 1328754 + G 76 -5.5 -5.00234 | ATGGCCGCTCACTGT GGGTG CGG TACCC TTTCTTTGTTTTTTC CKL_1291 1327917 - 1328786 + | hypothetical protein CKL_1292 1328999 - 1330993 + | methyl-accepting chemotaxis protein hisZ 1331129 - 1332304 + | HisZ hisG 1332379 - 1333038 + | ATP phosphoribosyltransferase catalytic subunit TERM 1648 1333439 - 1333427 - g 73 -7.7 -3.61438 | overlap 1333425 GGACAGCAAATAAGA CCCTT GGA AAGGG TGGGTATATATGTAC TERM 1649 1333525 - 1333495 - g 77 -9 -3.18264 | overlap 1333497 TTCCGTACTTATGAA TACTATTCCGGCCA AGG TAGCCGGAGTAGAA GAAATTATTATGGTG TERM 1650 1333523 - 1333497 - g 87 -11.6 -3.1552 | overlap 1333495 CCGTACTTATGAATA CTATTCCGGCCA AGG TAGCCGGAGTAG AAGAAATTATTATGG hisD 1333049 - 1334356 + | histidinol dehydrogenase TERM 1651 1334459 - 1334449 - g 76 -5.4 -4.95484 | GATTATGAAATAAAA TTGG ATG CCAA TGAGAGTTTTTTAAA TERM 1652 1335181 - 1335163 - g 81 -3.2 -5.80248 | GAATATATAAAAAAA TCTTTAGA GAA TATAAAGA ATGAAAGAAGTTTTT hisC 1334371 - 1335426 + | hypothetical protein TERM 1653 1335830 - 1335817 - g 74 -3.8 -5.1287 | GGGAGAGTTAAAAAA CTCC AAGGTG GGAG AAATGGATACGGAGC hisB 1335449 - 1336033 + | hypothetical protein hisH 1336049 - 1336657 + | imidazole glycerol phosphate synthase subunit HisH TERM 1654 1336891 - 1336873 - g 77 -7.6 -4.11484 | GGGAAGTGGTGAAAA TTTAGATA TAA TATCTAAA ATAGTGAAGAATGTA hisA 1336688 - 1337404 + | hypothetical protein hisF 1337407 - 1338168 + | hypothetical protein hisI 1338223 - 1338543 + | phosphoribosyl-AMP cyclohydrolase hisE 1338594 - 1338911 + | phosphoribosyl-ATP pyrophosphatase TERM 1655 1339009 - 1338986 - f 76 -8.4 -3.55304 | opp_overlap 1338985 ATATTTAAGAATTAA TATCTATAAT AAAA ATTATAGATA AACTTTATTTAGGAG CKL_1303 1339036 - 1339689 + | phosphatase CKL_1304 1339771 - 1340361 + | hypothetical protein hisK 1340499 - 1341272 + | hypothetical protein CKL_1306 1341774 - 1341355 - | hypothetical protein CKL_1307 1342145 - 1341861 - | hypothetical protein TERM 1656 1342266 - 1342237 - R 100 -10.2 -5.67529 | opp_overlap 1342237 1342258, overlap 1342261 AATTAAAAATAAAAA CTCTTCTTGTAA GATAAG TCACAAGAAGAG TTCCTTCATGCTTCT TERM 1657 1342237 - 1342266 + r 73 -8 -3.43553 | opp_overlap 1342237 1342261, overlap 1342258 AATTAAAAATAAAAA CTCTTCTTGTAA GATAAG TCACAAGAAGAG TTCCTTCATGCTTCT CKL_1308 1343371 - 1342496 - | phosphoesterase CKL_1309 1344735 - 1343422 - | recombination factor protein RarA TERM 1658 1344010 - 1344027 + g 71 -5.6 -4.58466 | GGTAATTTTCCTCTG GATGCA TTCTTT TGCATC TTTTGTGGTTATAAA TERM 1659 1344197 - 1344210 + g 87 -5.3 -5.57054 | TTTGGACTTTCAATT GCATT TTTT AATGC TTTTTTTACATTATT TERM 1660 1344967 - 1344915 - H 95 -11.2 -4.33182 | gap 1, opp_overlap 1344922, overlap 1344912 1344922 TCATCTAGAAAACAA TACGAAA-TATTATGACAATTAAAA TATA TATTAATTGTCATAATATTTTCATA TACAATCTTTGATAA TERM 1661 1344959 - 1344922 - H 100 -11.7 -4.06825 | opp_overlap 1344922, overlap 1344915 1344912 GAAAACAATACGAAA TATTATGACAATTAAAA TATA TATTAATTGTCATAATA TTTTCATATACAATC TERM 1662 1344922 - 1344959 + H 100 -11.7 -4.35116 | opp_overlap 1344922 1344915 1344912 GAAAACAATACGAAA TATTATGACAATTAAAA TATA TATTAATTGTCATAATA TTTTCATATACAATC CKL_1310 1345142 - 1345681 + | transcriptional regulator CKL_1311 1345988 - 1347577 + | hypothetical protein TERM 1663 1347592 - 1347615 + F 95 -11.8 -3.12595 | overlap 1347591 GGCAGTATTACTTGT CTCCCATCTT GAAA AGGATGGGAG TATTAGCTAATTACC CKL_1312 1347735 - 1348739 + | hypothetical protein TERM 1664 1348836 - 1348806 - g 71 -2 -5.36689 | overlap 1348809 AAACTAAAAATAAAA GTATTATTCTTTAT AAA ATAAAAAAGAATCC AATGACTATACTGGG CKL_1313 1348751 - 1349632 + | hypothetical protein TERM 1665 1349708 - 1349718 + G 70 -4 -4.99035 | AGAATTTATGTACTT GATA ATG TATC TTTTTCTGTAGATAA CKL_1314 1349645 - 1350601 + | hypothetical protein CKL_1315 1350601 - 1351353 + | hypothetical protein TERM 1666 1352258 - 1352245 - g 71 -3.1 -5.1383 | overlap 1352254 AAGAATATATAAAAA CCCAA GGTA TTGAG GATGCTTCAAAAATA CKL_1316 1351401 - 1352378 + | dipeptidase TERM 1667 1352388 - 1352423 + F 80 -6.4 -4.96501 | gap 1 GTATAATGATAGGGG CTGTTTATTAGCGATTT TTG AAATAGCTA-TGAACAG TTTCTTTTTATACCA TERM 1668 1352730 - 1352716 - g 72 -5.8 -4.42788 | opp_overlap 1352708 TCCAATCTTAGAAAA TCTAAT TTG ATTAGA AGTATAAGAGGATCA CKL_1317 1352563 - 1353009 + | transcriptional regulator nifS2 1353010 - 1354218 + | hypothetical protein nifU2 1354215 - 1354646 + | NifU2 TERM 1669 1354682 - 1354663 - f 95 -8 -5.38047 | opp_overlap 1354663 TATTGATATAAAAAA TATAACTC TTTG GAGTTATA TTTTTTATTTTTACG TERM 1670 1354663 - 1354682 + F 100 -8 -5.93252 | opp_overlap 1354663 TATTGATATAAAAAA TATAACTC TTTG GAGTTATA TTTTTTATTTTTACG CKL_1320 1354738 - 1355241 + | hypothetical protein CKL_1321 1355268 - 1356293 + | permease TERM 1671 1356328 - 1356351 + F 100 -12.6 -5.09762 | GTATATAAATTTTTA GCATGAAAGT AAAA ACTTTCATGC TTTTTGTATTAAAAT TERM 1672 1356386 - 1356400 + F 72 -7.2 -4.03078 | opp_overlap 1356385 1356386 GATATATTACAAAAT CACAAA TGT TTTGTG TTTATGGTATAATCA TERM 1673 1357129 - 1357141 + G 74 -9.1 -3.01089 | overlap 1357129 GGAGCACTTTTGTGT GCAGC GGT GCTGC TGCTTTGCATTTATC CKL_1322 1356505 - 1357176 + | hypothetical protein CKL_1323 1357214 - 1358563 + | hypothetical protein TERM 1674 1358619 - 1358598 - f 86 -8.9 -4.36914 | opp_overlap 1358598 GTTTTTTGCATAAAA GTTCAATTT TTTA AAATTGAAC TTTTATGATCATAAA TERM 1675 1358598 - 1358619 + F 88 -8.9 -4.4891 | opp_overlap 1358598 GTTTTTTGCATAAAA GTTCAATTT TTTA AAATTGAAC TTTTATGATCATAAA TERM 1676 1358893 - 1358919 + F 77 -2.2 -5.75538 | overlap 1358887 1358894 GTGGTACCGCGAAAA ACTTTCGTCCCT TTT ATGGATGGAAGC TTTTTATTTTTTAAA TERM 1677 1359044 - 1359029 - g 79 -2.6 -5.75342 | gap 1, opp_overlap 1359035, overlap 1359012 TTTTTTGAAAAAAAA GCACATC TGA GAT-TGC CCAGCTTTTCTCTAG TERM 1678 1360271 - 1360257 - g 70 -4.2 -4.98128 | AGAATCAAAAAGAAA TGGCAA GAT CCGCCA GGACAGAAACTAATT alaS 1358969 - 1361608 + | alanyl-tRNA synthetase CKL_1325 1361673 - 1361924 + | hypothetical protein TERM 1679 1361948 - 1361922 - f 74 -6.7 -4.431 | opp_overlap 1361922 1361928 TATTTAGGTATAAAA TAAGAATGTCC TTTTT GGACATTTTTA TTTTAAATATGACAA TERM 1680 1361922 - 1361948 + F 86 -8.9 -4.2349 | opp_overlap 1361922, overlap 1361928 TATTTAGGTATAAAA TAAGAATGTCC TTTTT GGACATTTTTA TTTTAAATATGACAA TERM 1681 1361928 - 1361942 + F 86 -5.7 -5.48213 | opp_overlap 1361922, overlap 1361922 GGTATAAAATAAGAA TGTCC TTTTT GGACA TTTTTATTTTAAATA CKL_1326 1361988 - 1362401 + | Holliday junction resolvase-like protein CKL_1327 1362444 - 1362698 + | hypothetical protein TERM 1682 1362707 - 1362764 + F 100 -17.7 -3.13906 | gap 1, opp_overlap 1362720, overlap 1362712 1362714 1362720 1362726 TGATTAAAATAATTT GTTAATGTTAAAACTAAAGGCTATAAGG AAG TCT-ATAGCTTTTAGTTTTAATATTAAC TGATTTTCAATTGAC TERM 1683 1362712 - 1362759 + F 95 -11.8 -3.19038 | gap 1, opp_overlap 1362720, overlap 1362707 1362714 1362720 1362726 AAAATAATTTGTTAA TGTTAAAACTAAAGGCTATAAGG AAG TCT-ATAGCTTTTAGTTTTAATA TTAACTGATTTTCAA TERM 1684 1362714 - 1362757 + F 95 -12.2 -3.15124 | gap 1, opp_overlap 1362720, overlap 1362712 1362707 1362720 1362726 AATAATTTGTTAATG TTAAAACTAAAGGCTATAAGG AAG TCT-ATAGCTTTTAGTTTTAA TATTAACTGATTTTC TERM 1685 1362720 - 1362751 + F 74 -6.8 -4.43681 | gap 1, opp_overlap 1362720, overlap 1362714 1362712 1362707 1362726 TTGTTAATGTTAAAA CTAAAGGCTATAAGG AAG TCT-ATAGCTTTTAG TTTTAATATTAACTG fur3 1362864 - 1363322 + | hypothetical protein CKL_1329 1363360 - 1365027 + | metal-dependent hydrolase TERM 1686 1365104 - 1365125 + F 86 -7.4 -5.14477 | ATATTATAATTTTGA TTGGATAC AAGAAA GTATCCAA TTTTTTCAGTATATG TERM 1687 1366836 - 1366822 - g 84 -3.6 -5.81412 | overlap 1366825 1366834 TGTATGCAAAAAAAA GCATTT GTC AAATAC CAGATCTTCTGGAGC CKL_1330 1365191 - 1367014 + | GTP-binding protein TERM 1688 1367693 - 1367679 - g 76 -8.6 -3.484 | TTGATGATATGATAA CTATGG CTT CCATAG TGGAAAAGGAGGTAG CKL_1331 1367030 - 1368049 + | hypothetical protein CKL_1332 1368065 - 1368712 + | methyltransferase CKL_1333 1368714 - 1369937 + | protease CKL_1334 1370015 - 1371676 + | peptidoglycanglycosyltransferase TERM 1689 1372160 - 1372146 - g 77 -4.3 -5.31158 | CAAAAAAATTAAAAA TGAAG TATAT CTTCA GGATCCAATAGGTGT sigE1 1371769 - 1372470 + | sporulation sigma factor SigK pilT 1372802 - 1373857 + | hypothetical protein TERM 1690 1373893 - 1373876 - f 86 -5.7 -5.55769 | opp_overlap 1373876, overlap 1373869 GGGTATAATAAAAAA TAAAACT GAAA AGTTTTA TTTTTATATAAAGCT TERM 1691 1373876 - 1373893 + F 78 -5.7 -4.9725 | opp_overlap 1373876 1373869 GGGTATAATAAAAAA TAAAACT GAAA AGTTTTA TTTTTATATAAAGCT TERM 1692 1373914 - 1373961 + F 100 -26.2 -2.8785 | opp_overlap 1373907 1373930, overlap 1373918 ATATAAAGCTGTTTT GCAATTCTCTTAATCATGTAAA ATAT TTTACATGATTAAGAGAATTGC TATAGTAATTAATTC TERM 1693 1373918 - 1373957 + F 100 -19.8 -3.31157 | opp_overlap 1373907 1373930, overlap 1373914 AAAGCTGTTTTGCAA TTCTCTTAATCATGTAAA ATAT TTTACATGATTAAGAGAA TTGCTATAGTAATTA TERM 1694 1374625 - 1374642 + G 76 -5.6 -4.99035 | opp_overlap 1374624 1374625 TTTGGGATTATCAAC CCAGTT AGGTGG AACTGG TTTTTGTATAAATAC CKL_1337 1374017 - 1375291 + | glycosyltransferase TERM 1695 1375355 - 1375303 - f 90 -11 -3.55191 | opp_overlap 1375300 1375312 1375317, overlap 1375301 1375306 1375317 TTAAGGCTATAAATA TAATTTTGATTTAAGGGAAAAAAC TGTAG GTTTTTTCCCTTAAATATATATTA GGGTTAATTTGGGAT TERM 1696 1375352 - 1375306 - f 78 -8.3 -3.90097 | opp_overlap 1375300 1375312 1375317, overlap 1375303 1375301 1375317 AGGCTATAAATATAA TTTTGATTTAAGGGAAAAAAC TGTAG GTTTTTTCCCTTAAATATATA TTAGGGTTAATTTGG TERM 1697 1375312 - 1375346 + F 100 -16.8 -3.10959 | opp_overlap 1375306 1375303 1375301 1375317, overlap 1375300 1375317 TAAATATAATTTTGA TTTAAGGGAAAAAACT GTA GGTTTTTTCCCTTAAA TATATATTAGGGTTA TERM 1698 1375341 - 1375317 - f 91 -11.6 -3.0701 | opp_overlap 1375312 1375300 1375317, overlap 1375306 1375303 1375301 ATAATTTTGATTTAA GGGAAAAAAC TGTAG GTTTTTTCCC TTAAATATATATTAG TERM 1699 1375317 - 1375341 + F 95 -12.3 -3.19255 | opp_overlap 1375317 1375306 1375303 1375301, overlap 1375312 1375300 ATAATTTTGATTTAA GGGAAAAAACT GTA GGTTTTTTCCC TTAAATATATATTAG TERM 1700 1377178 - 1377166 - g 72 -2.7 -5.34632 | AATAAAATATAAAAA TATAG ATA CTACA ACAAATAAAAATGAA ftsA 1376036 - 1377304 + | hypothetical protein ftsZ 1377324 - 1378442 + | cell division protein FtsZ TERM 1701 1378478 - 1378447 - f 100 -16.1 -6.07374 | opp_overlap 1378447 AGAAAAAATAAAAAA TCCACATATGGCA ATTAGA TGCCATATGTGGA TTTTTTATTTTTTCT TERM 1702 1378447 - 1378478 + F 100 -16.1 -6.07374 | opp_overlap 1378447 AGAAAAAATAAAAAA TCCACATATGGCA ATTAGA TGCCATATGTGGA TTTTTTATTTTTTCT CKL_1340 1378723 - 1379520 + | sigma-E factor processing peptidase sigE2 1379550 - 1380257 + | sporulation sigma factor SigE sigG 1380331 - 1381104 + | sporulation sigma factor SigG CKL_1343 1381160 - 1381429 + | hypothetical protein CKL_1344 1381501 - 1381956 + | transcriptional regulator NrdR TERM 1703 1381955 - 1381982 + F 91 -4.2 -6.06723 | opp_overlap 1381958, overlap 1381958 TAATTTCTAATAGAT AAAGTGGTCAAT AGAT ATTCACCACTTA TTTTTTTTTACCCCC TERM 1704 1381958 - 1381979 + F 80 -5.9 -5.09685 | opp_overlap 1381958, overlap 1381955 TTTCTAATAGATAAA GTGGTCAAT AGAT ATTCACCAC TTATTTTTTTTTACC CKL_1345 1382108 - 1382836 + | hypothetical protein phoB 1382895 - 1383590 + | PhoB phoR 1383600 - 1385327 + | PhoR TERM 1705 1385346 - 1385381 + F 72 -6.4 -4.42238 | ATTATATAGATTAGG TTAACATCTGATATAT TTAA AAATATTGGATGTTAA TTTTAATTAACATAG pstS 1385496 - 1386383 + | hypothetical protein TERM 1706 1386394 - 1386419 + F 100 -12.7 -3.89524 | opp_overlap 1386387, overlap 1386397 AATAGAAATTATTTT TAGCTGGCTGT TTAA ACAGCCAGTTA TTTATAAAATAAAAT TERM 1707 1386397 - 1386416 + F 100 -12.2 -4.07877 | opp_overlap 1386387, overlap 1386394 AGAAATTATTTTTAG CTGGCTGT TTAA ACAGCCAG TTATTTATAAAATAA TERM 1708 1386689 - 1386709 + G 83 -8.3 -4.18465 | overlap 1386690 GGGCACCAGACGGCA ATGCTCCAA AGC TTGGAGCAC TTATATTTTTTGCAG TERM 1709 1386690 - 1386708 + G 89 -11.8 -3.09995 | overlap 1386689 GGCACCAGACGGCAA TGCTCCAA AGC TTGGAGCA CTTATATTTTTTGCA pstC 1386481 - 1387386 + | hypothetical protein TERM 1710 1388256 - 1388242 - g 78 -5.8 -4.88736 | TATTAGGTAGAAAAA TATATG AAT CATATA CAGGTAAGAAATAAG pstA 1387383 - 1388270 + | hypothetical protein pstB 1388283 - 1389032 + | hypothetical protein phoU 1389107 - 1389763 + | hypothetical protein TERM 1711 1389779 - 1389806 + F 100 -5.7 -6.25578 | TTTATGTAGAGGTTA GGCTTTAAACT GAAGAG GGTTTAAAGTC TTTTTTTTATTTAAT TERM 1712 1390042 - 1390032 - g 71 -6.8 -4.05035 | AAAAAAATTAAAAGA GGTG GAA CACC AAGGAGATAAAAAAC CKL_1353 1389889 - 1390512 + | pit accessory protein TERM 1713 1390815 - 1390794 - g 75 -8.1 -3.73783 | TATGGAATTTAATAA CCTGGTATT TTGG AATACCAAG CAGTTCTTCTCATGC pitA 1390505 - 1391503 + | hypothetical protein TERM 1714 1391514 - 1391542 + F 82 -2.6 -6.04324 | gap 1, opp_overlap 1391514, overlap 1391519 TTTAATTTTTAAAAA TCTCTTCTATAAA ATAA TTTTTAG-AGAGA TTTTTTATTTTTTGG CKL_1355 1391792 - 1393126 + | hypothetical protein CKL_1356 1393130 - 1394446 + | GTP-binding protein EngA TERM 1715 1395299 - 1395309 + G 74 -5.4 -4.91712 | opp_overlap 1395299 GTAGAGGGTATAAAG GCAT GTA ATGC TTTTTATGGATTAAA gpsA 1394450 - 1395448 + | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase CKL_1358 1395585 - 1397819 + | glycosyltransferase CKL_1359 1398015 - 1398692 + | transcriptional regulator CKL_1360 1398689 - 1400050 + | two component sensor kinase CKL_1361 1400162 - 1401136 + | hypothetical protein CKL_1362 1401260 - 1402738 + | hypothetical protein TERM 1716 1402728 - 1402738 + F 71 -2.6 -5.46629 | GCGGCTTAATATGTA TTAT ACT ATAA TTTTTTTAAAGTATT TERM 1717 1403170 - 1403184 + G 79 -8.6 -3.76641 | opp_overlap 1403170 AATGAAAAGTGTAAA TCACAG ATA CTGTGA TTTGAATGTTAAAAT TERM 1718 1403184 - 1403170 - g 79 -8.6 -3.78087 | opp_overlap 1403170 AATGAAAAGTGTAAA TCACAG ATA CTGTGA TTTGAATGTTAAAAT CKL_1363 1403087 - 1403965 + | hypothetical protein CKL_1364 1403981 - 1404259 + | hypothetical protein CKL_1365 1404256 - 1404921 + | guanylate kinase CKL_1366 1404863 - 1405081 + | DNA-directed RNA polymerase omega chain TERM 1719 1406238 - 1406228 - g 83 -6.8 -4.79657 | ATAAGATGAATAAAA GGCA AGT TGCC AGAAGAATATTTGAT coaBC 1405078 - 1406271 + | bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase TERM 1720 1407941 - 1407930 - g 74 -3 -5.50774 | opp_overlap 1407930, overlap 1407924 CACAAGAAATAAAAA TTCT TATG AGAA TATTTATAACAGATT CKL_1368 1406371 - 1408572 + | primosome assembly protein PriA TERM 1721 1408828 - 1408841 + G 70 -8.1 -3.04517 | overlap 1408827 GAGTAGGACTTGCAG CCCCA CAGG TGGGG GTTTTGAAAAGAGCT CKL_1369 1408683 - 1409126 + | peptide deformylase TERM 1722 1409734 - 1409717 - g 72 -2.7 -5.48063 | gap 1, overlap 1409720 1409721 AGTTAAGAGAAAAAA GCAGGGAG AGT CTCC-TAC AGCATATGCAAAAAT CKL_1370 1409142 - 1410074 + | methionyl-tRNA formyltransferase CKL_1371 1410093 - 1410773 + | hypothetical protein CKL_1372 1410845 - 1412176 + | hypothetical protein CKL_1373 1412186 - 1413265 + | hypothetical protein TERM 1723 1413881 - 1413866 - gf 74 -4 -5.25772 | AAATGACAATAAAAA TAGCTG TAGA CAACTA ATAGAGTTAAGTAAT CKL_1374 1413237 - 1413977 + | serine/threonine protein phosphatase TERM 1724 1414475 - 1414457 - g 80 -6 -4.94058 | opp_overlap 1414457, overlap 1414452 CTAATTCAAATAAAA TAATGGGC TCT GCACATTA TTTTTCTCCTGAGCA TERM 1725 1414457 - 1414475 + G 78 -6 -4.91109 | opp_overlap 1414457 1414452 CTAATTCAAATAAAA TAATGGGC TCT GCACATTA TTTTTCTCCTGAGCA CKL_1375 1413952 - 1415868 + | serine/threonine kinase TERM 1726 1416520 - 1416537 + G 76 -5.5 -5.10461 | overlap 1416522 ATTAGAAGATGGATT CATGGTG GATA CACCAGG TTTTTCTTCACTAGA CKL_1376 1415897 - 1416760 + | ribosome-associated GTPase CKL_1377 1416799 - 1417449 + | ribulose-phosphate 3-epimerase TERM 1727 1417492 - 1417469 - g 89 -12.5 -2.63112 | opp_overlap 1417466 1417466 AAAGTGCTTATAGTA TCTGGAGGG ACTGCA CCCTCCAGA GAACTTATTCAGGAG TERM 1728 1417676 - 1417664 - g 74 -4.1 -5.28983 | TGCAAAATAGAAAAA TATCC TAG GGACA AAAATTTTACAGATA CKL_1378 1417451 - 1418086 + | hypothetical protein CKL_1379 1418184 - 1418339 + | hypothetical protein TERM 1729 1418466 - 1418444 - T 100 -10 -5.48213 | opp_overlap 1418444 TAGGTAAAACAAAAA TGCAATTGTT TAT AACAACTGCA TTTTTGTTTTTTTAT TERM 1730 1418444 - 1418466 + T 100 -7.8 -5.89659 | opp_overlap 1418444 TAGGTAAAACAAAAA TGCAATTGTT TAT AACAACTGCA TTTTTGTTTTTTTAT rpmB 1418669 - 1418478 - | hypothetical protein TERM 1731 1418806 - 1418848 + H 100 -14 -2.57721 | opp_overlap 1418814, overlap 1418811 1418814 TTTTAATAGTCATAC GTTAATAATTGTTATTATAT GGT ATATAATAACAATTATTAAG TAAATTAATGACTTG TERM 1732 1418811 - 1418843 + H 100 -13.9 -3.10409 | opp_overlap 1418814, overlap 1418806 1418814 ATAGTCATACGTTAA TAATTGTTATTATAT GGT ATATAATAACAATTA TTAAGTAAATTAATG TERM 1733 1418814 - 1418840 + H 93 -11.2 -3.69283 | opp_overlap 1418814, overlap 1418811 1418806 GTCATACGTTAATAA TTGTTATTATAT GGT ATATAATAACAA TTATTAAGTAAATTA TERM 1734 1418840 - 1418814 - H 93 -11.2 -3.66844 | opp_overlap 1418814 1418811 1418806 GTCATACGTTAATAA TTGTTATTATAT GGT ATATAATAACAA TTATTAAGTAAATTA TERM 1735 1419126 - 1419116 - g 73 -8.2 -3.4997 | overlap 1419114 ATAGTGATAATAACA GCGG GAG CCGC ACAAAACCACGGACA CKL_1381 1418879 - 1419826 + | hypothetical protein TERM 1736 1419834 - 1419870 + F 89 -7.5 -5.02201 | overlap 1419837 ATATTTAATTGATCT CAGCCACTAATTAGA AGTATAC TCTAATTAGTGGTTA TTTTTCTAATATTTT TERM 1737 1419837 - 1419867 + F 100 -11.4 -4.57057 | overlap 1419834 TTTAATTGATCTCAG CCACTAATTAGA AGTATAC TCTAATTAGTGG TTATTTTTCTAATAT CKL_1382 1419971 - 1420321 + | alkaline shock protein TERM 1738 1420556 - 1420522 - g 87 -8.8 -4.29176 | opp_overlap 1420528 ATATCCAATGTAAAA GGTAAATCTATAGATA ATG TATCTAAAGATTTAGC TAAAGGAGCCCTTAT TERM 1739 1421003 - 1420975 - g 100 -13.3 -4.48299 | GTATATTTAAAGAAA GCTGAAGATATAG TAA CTAAATCTTCAGC TAAAAGTGTGGAATC CKL_1383 1420339 - 1422006 + | kinase TERM 1740 1422004 - 1422031 + F 83 -10.1 -3.17486 | overlap 1421994 ATAGTTTCTGTTGAA TAAAAAAAGCC AGCTAG GGCTTTTTTTA TTCCTGCGAATTATT CKL_1384 1422111 - 1424150 + | hypothetical protein CKL_1385 1424276 - 1424836 + | hypothetical protein coaD 1424842 - 1425336 + | hypothetical protein CKL_1387 1425358 - 1425882 + | hypothetical protein CKL_1388 1427031 - 1425865 - | hypothetical protein CKL_1389 1428346 - 1427120 - | hypothetical protein TERM 1741 1428204 - 1428216 + g 81 -9.1 -3.88583 | opp_overlap 1428204 CATTTATCCACTATA GAGGG AGC CCCTC TTTGTACAAAATTTC TERM 1742 1428216 - 1428204 - G 73 -9.1 -2.81133 | opp_overlap 1428204 CATTTATCCACTATA GAGGG AGC CCCTC TTTGTACAAAATTTC pta 1428554 - 1429555 + | phosphotransacetylase ackA 1430453 - 1431670 + | AckA TERM 1743 1431741 - 1431702 - f 90 -11.1 -3.66874 | opp_overlap 1431707 1431710 1431726 1431733, overlap 1431707 1431710 TTAAGGCCATTTAAA GATAATAACAGAGTAAA TTTTAG TTTATTCTGTTATTATC CATATTAGAATAATA TERM 1744 1431707 - 1431736 + F 73 -8.1 -3.42503 | opp_overlap 1431707 1431702 1431710, overlap 1431710 1431726 1431733 GCCATTTAAAGATAA TAACAGAGTAAAT TTTA GTTTATTCTGTTA TTATCCATATTAGAA CKL_1392 1431819 - 1432322 + | hypothetical protein rpmF 1432336 - 1432518 + | 50S ribosomal protein L32 CKL_1394 1432735 - 1433739 + | putative glycerol-3-phosphate acyltransferase PlsX CKL_1395 1433870 - 1434103 + | hypothetical protein TERM 1745 1434140 - 1434114 - f 86 -9.5 -3.77413 | opp_overlap 1434112 1434118, overlap 1434112 1434118 AATAGCATCAAAAGA TAGAGTCCCGT TTCAT ACGGGACTTTA AATTTAAATTTTTCT TERM 1746 1434118 - 1434136 + F 90 -10.3 -3.87583 | opp_overlap 1434114 1434112 1434118, overlap 1434112 GCATCAAAAGATAGA GTCCCGT TTCAT ACGGGAC TTTAAATTTAAATTT TERM 1747 1434136 - 1434118 - f 86 -10.3 -3.28966 | opp_overlap 1434118 1434112, overlap 1434114 1434112 GCATCAAAAGATAGA GTCCCGT TTCAT ACGGGAC TTTAAATTTAAATTT CKL_1396 1434272 - 1435006 + | ribonuclease III TERM 1748 1435034 - 1435054 + G 80 -9.7 -3.55457 | overlap 1435037 ACCCATATTTGTTCC CCATGAGGG ATG CCCTCATAG TTGCATTTTTTGTGA TERM 1749 1435037 - 1435051 + G 79 -10 -2.8838 | overlap 1435034 CATATTTGTTCCCCA TGAGGG ATG CCCTCA TAGTTGCATTTTTTG TERM 1750 1435159 - 1435180 + G 74 -3.1 -5.40072 | gap 1, opp_overlap 1435160, overlap 1435160 AAACCATAAAAAGAA G-TACTTCTA AAG TGGAAGTATC TTTTTTTGGAGGGAC TERM 1751 1435160 - 1435178 + G 74 -6.8 -4.34482 | opp_overlap 1435160, overlap 1435159 AACCATAAAAAGAAG TACTTCTA AAG TGGAAGTA TCTTTTTTTGGAGGG CKL_1397 1434996 - 1436069 + | hypothetical protein TERM 1752 1436587 - 1436569 - g 81 -10.4 -2.87564 | GCAGGCTGCGAGATA TCCATGAA CTT TTCATGGA TACAGGTATAGGAAG TERM 1753 1438362 - 1438344 - g 70 -3.9 -4.93365 | overlap 1438337 1438358 TCTGACAAGGAAAAA CTCCATT GCCAA AATGAAG ATTTCAAGGAGAAAA TERM 1754 1439591 - 1439573 - g 89 -11.8 -3.29972 | opp_overlap 1439571, overlap 1439571 1439569 ATTGGATGAAATAGA GGCATCAT TAG ATGATGCC AATGTATTACGGTAT CKL_1398 1436199 - 1439750 + | hypothetical protein TERM 1755 1440487 - 1440471 - g 90 -12.3 -3.35438 | overlap 1440481 1440482 TATTAGATGCCACAA CAGGGCA AAA TGCCCTG CAGCAGGCTAAACAA ftsY 1439774 - 1440685 + | hypothetical protein CKL_1400 1440779 - 1441114 + | hypothetical protein TERM 1756 1441341 - 1441353 + G 77 -9.1 -3.31792 | CTAAAGAGTCTTACT CCTGC ACA GCAGG TTATAAAAATAGTAA TERM 1757 1441486 - 1441474 - g 72 -4.8 -4.7871 | AAGGATCAGGAAAAA CCAC TATGT GTGG AAAATTGGCACTACA TERM 1758 1442305 - 1442293 - g 71 -7.7 -3.46858 | opp_overlap 1442296, overlap 1442296 TGACATTAAAAGAGA GAAGG AAA CCTTC CATTGTAAGTGGCTC CKL_1401 1441131 - 1442480 + | hypothetical protein TERM 1759 1442771 - 1442759 - g 76 -3.4 -5.35222 | AAAATGGATAAAAAA TGGT GCTCA ACCA ACAGACATTGTAAAA rpsP 1442574 - 1442831 + | 30S ribosomal protein S16 CKL_1403 1442851 - 1443078 + | hypothetical protein TERM 1760 1443060 - 1443116 + F 91 -8.3 -4.84219 | opp_overlap 1443071 1443074 1443079, overlap 1443062 1443064 AGAGAATAAAAGAGT GGTTGTAGAGATAATATAAGAGTTAGA TTA TCTAACTCTTATATTATCTAAACTGTA TTTCTTTTGTAGTTT TERM 1761 1443062 - 1443114 + F 100 -13.1 -4.00842 | opp_overlap 1443071 1443074 1443079, overlap 1443060 1443064 AGAATAAAAGAGTGG TTGTAGAGATAATATAAGAGTTAGA TTA TCTAACTCTTATATTATCTAAACTG TATTTCTTTTGTAGT TERM 1762 1443064 - 1443112 + F 100 -17.9 -3.57364 | opp_overlap 1443071 1443074 1443079, overlap 1443062 1443060 AATAAAAGAGTGGTT GTAGAGATAATATAAGAGTTAGA TTA TCTAACTCTTATATTATCTAAAC TGTATTTCTTTTGTA TERM 1763 1443105 - 1443071 - f 100 -17.6 -2.87344 | opp_overlap 1443064 1443062 1443060, overlap 1443074 1443079 GAGTGGTTGTAGAGA TAATATAAGAGTTAGA TTA TCTAACTCTTATATTA TCTAAACTGTATTTC TERM 1764 1443102 - 1443074 - f 100 -14.9 -3.58726 | opp_overlap 1443064 1443062 1443060, overlap 1443071 1443079 TGGTTGTAGAGATAA TATAAGAGTTAGA TTA TCTAACTCTTATA TTATCTAAACTGTAT TERM 1765 1443097 - 1443079 - f 90 -10.4 -3.82061 | opp_overlap 1443064 1443062 1443060, overlap 1443074 1443071 GTAGAGATAATATAA GAGTTAGA TTA TCTAACTC TTATATTATCTAAAC TERM 1766 1443164 - 1443149 - f 70 -6.8 -3.93963 | opp_overlap 1443149 ACTATGAGGGATAAA GGGAGA GTAT CCTCCC TGTTAAGGTTAAAAT CKL_1404 1443258 - 1443746 + | 16S rRNA-processing protein CKL_1405 1443737 - 1444471 + | tRNA (guanine-N(1)-)-methyltransferase rplS 1444633 - 1444980 + | 50S ribosomal protein L19 TERM 1767 1444978 - 1445009 + F 88 -11 -3.09289 | opp_overlap 1444978 1444981 1444983, overlap 1444983 AAAGAAATATTAAAA TAAGAGAGGGGCTT TATA AAGTCCCTCTTTTG TATGTTAAGGTGGTG TERM 1768 1445006 - 1444981 - f 72 -6.1 -4.34993 | opp_overlap 1444978 1444983, overlap 1444978 1444983 GAAATATTAAAATAA GAGAGGGGCTT TATA AAGTCCCTCTT TTGTATGTTAAGGTG TERM 1769 1445004 - 1444983 - f 78 -8.7 -3.74992 | opp_overlap 1444978 1444983, overlap 1444981 1444978 AATATTAAAATAAGA GAGGGGCTT TATA AAGTCCCTC TTTTGTATGTTAAGG TERM 1770 1444983 - 1445004 + F 100 -10.9 -4.67943 | opp_overlap 1444983 1444981 1444978, overlap 1444978 AATATTAAAATAAGA GAGGGGCTT TATA AAGTCCCTC TTTTGTATGTTAAGG CKL_1407 1445032 - 1445556 + | hypothetical protein CKL_1408 1445570 - 1446412 + | ribosomal biogenesis GTPase TERM 1771 1446781 - 1446765 - g 71 -8 -3.20941 | overlap 1446763 GATGAAGTAGGAAGA GGACCT TTAGC AGGTCC CATAGTTGCAGCTGC CKL_1409 1446432 - 1447298 + | ribonuclease HII CKL_1410 1447683 - 1447315 - | hypothetical protein CKL_1411 1449630 - 1448113 - | hypothetical protein TERM 1772 1448343 - 1448353 + g 72 -2.6 -5.43553 | TGTTCATATCTGAAT TATA GTA TATA TTTTCTTTTTTAAAT CKL_1412 1450518 - 1449700 - | hypothetical protein CKL_1413 1450457 - 1450672 + | hypothetical protein CKL_1414 1450676 - 1451776 + | Smf protein TERM 1773 1453389 - 1453378 - g 83 -4.4 -5.52384 | CTTCTATTAAAAAAA TCCA TAGA TGGA AAACAACATTTTACA TERM 1774 1453724 - 1453711 - g 84 -5.3 -5.43866 | GAACCTTTAAAAAAA GCTAT TGAG ATAGC AGAAAAAGAAGTTGC CKL_1415 1452043 - 1454136 + | DNA topoisomerase I codY 1454464 - 1455240 + | transcriptional repressor CodY rpsB 1455596 - 1456300 + | 30S ribosomal protein S2 tsf 1456522 - 1457442 + | elongation factor Ts TERM 1775 1457453 - 1457471 + F 100 -9.6 -5.06451 | opp_overlap 1457453 AATAGTAACTTAAAA GAGGACAC TGC GTGTTCTC TTTTTTGGGGTGCTA TERM 1776 1457471 - 1457453 - f 76 -7.4 -4.31688 | opp_overlap 1457453 AATAGTAACTTAAAA GAGGACAC TGC GTGTTCTC TTTTTTGGGGTGCTA pyrH 1457541 - 1458254 + | uridylate kinase TERM 1777 1458559 - 1458544 - g 74 -7.6 -3.86346 | TGACCTTGGTATAAA TCCATC AAAT GATGGA GAGATAATAAGACTT frr 1458275 - 1458832 + | ribosome recycling factor TERM 1778 1458846 - 1458861 + F 82 -6.1 -5.12068 | opp_overlap 1458846, overlap 1458840 AATTAGATTTTAAAA CCTGC CAATTT GCAGG TTTTTATTAAATATA TERM 1779 1458861 - 1458846 - f 70 -6.1 -4.18058 | opp_overlap 1458846 1458840 AATTAGATTTTAAAA CCTGC CAATTT GCAGG TTTTTATTAAATATA uppS1 1458902 - 1459666 + | UppS1 CKL_1422 1459882 - 1460688 + | phosphatidate cytidylyltransferase TERM 1780 1460702 - 1460733 + F 100 -11 -5.20783 | opp_overlap 1460721, overlap 1460703 AAAATTTGTTATTTA GGGAGATTTTCCAT ATAG ATGGAAGATCTCCA TTTTTGTCTTTAAAT TERM 1781 1460703 - 1460732 + F 100 -14.5 -3.70843 | opp_overlap 1460721, overlap 1460702 AAATTTGTTATTTAG GGAGATTTTCCAT ATAG ATGGAAGATCTCC ATTTTTGTCTTTAAA TERM 1782 1461436 - 1461416 - g 70 -8.3 -3.02471 | opp_overlap 1461408, overlap 1461419 TTTTCAGGATATAGA GAAGCTGTA TCT TACTGCTTC CGGGGGACCCTTTAG dxr 1460910 - 1462067 + | 1-deoxy-D-xylulose 5-phosphate reductoisomerase CKL_1424 1462095 - 1463105 + | protease TERM 1783 1463085 - 1463099 + F 71 -4.4 -4.82678 | opp_overlap 1463085 ACTGTAAAAGATATA TTTTAT CCT ATAAAA TTTTAGTTTTTATCC TERM 1784 1463215 - 1463184 - g 79 -7.3 -4.36063 | overlap 1463185 1463186 ATAAGAGTAGGAAAA GTGGCTATAGGAG GTAATG CTCCTATAGCCGT GCAATCTATGACTAA TERM 1785 1463214 - 1463185 - g 85 -10.8 -3.20553 | overlap 1463184 1463186 TAAGAGTAGGAAAAG TGGCTATAGGAG GTAATG CTCCTATAGCCG TGCAATCTATGACTA TERM 1786 1463213 - 1463186 - g 100 -14.3 -2.51609 | overlap 1463185 1463184 AAGAGTAGGAAAAGT GGCTATAGGAG GTAATG CTCCTATAGCC GTGCAATCTATGACT TERM 1787 1464035 - 1464017 - g 73 -4.6 -5.00642 | TAATGTAGATAAAAA CATAAAAG TAG CTGTTATG GGATGTGTGGTAAAC ispG 1463145 - 1464194 + | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase TERM 1788 1466022 - 1466011 - g 70 -4.4 -4.87318 | opp_overlap 1466015, overlap 1466015 TTTAAAATTTAAAAA TCCA GTTA TGGA TACCATACCTCTCTG polC 1464416 - 1468735 + | DNA polymerase III PolC TERM 1789 1468886 - 1468905 + F 78 -7.8 -4.40003 | TTATTTGGTATGTAG GAGTGGGT TTGA GCCCGCTC TTTCTATTTGTCAAA TERM 1790 1468916 - 1468945 + F 71 -8.7 -2.84134 | opp_overlap 1468923, overlap 1468923 CGCTCTTTCTATTTG TCAAAAACGCAGC GAAA GTTGCGTTTTTAA ATTATTAATGACTGT TERM 1791 1468923 - 1468938 + F 79 -6.8 -4.8143 | opp_overlap 1468923, overlap 1468916 TCTATTTGTCAAAAA CGCAGC GAAA GTTGCG TTTTTAAATTATTAA CKL_1427 1469009 - 1469473 + | hypothetical protein TERM 1792 1470045 - 1470017 - g 72 -4.8 -4.84761 | ATACCTGGAGAAAAA TATAATTTCAAT GATAA ACTGAAACTATA TATTGTAGAAGTTAA TERM 1793 1470450 - 1470435 - g 73 -9 -2.87468 | overlap 1470430 TTGTAGTAGATGACA GCCAGT TGTC ACTGGC CATAGGTAAAGAGGG nusA 1469492 - 1470559 + | transcription elongation factor NusA CKL_1429 1470572 - 1470841 + | hypothetical protein CKL_1430 1470831 - 1471148 + | hypothetical protein TERM 1794 1471556 - 1471545 - g 73 -4.4 -5.01732 | AATTTTCTGAAAAAA TAGG TAAA CCTA TTACAGAAGTTATAA infB 1471166 - 1473250 + | translation initiation factor IF-2 CKL_1432 1473269 - 1473634 + | ribosome-binding factor A CKL_1433 1473621 - 1474586 + | hydrolase truB 1474586 - 1475455 + | tRNA pseudouridine synthase B ribF 1475467 - 1476405 + | bifunctional riboflavin kinase/FMN adenylyltransferase TERM 1795 1476412 - 1476382 - f 95 -7.2 -5.5604 | opp_overlap 1476389 1476407, overlap 1476407 GCAAGTAAGAAAAAA TTACAAATTAATTT TAA AAATTAATTTACAA TAGTAAGTTTATTTG rpsO 1476521 - 1476784 + | hypothetical protein TERM 1796 1476789 - 1476810 + F 95 -11.6 -4.18164 | opp_overlap 1476787 TGAGAAAATAATTTT TGGAGCGG CTTTTA CCGCTCCA TTGTTTTAAGGAATT pnp 1476855 - 1478981 + | polynucleotide phosphorylase/polyadenylase TERM 1797 1478987 - 1479010 + F 71 -3.9 -5.15969 | AAAAAAGTAGCAAAA TAGAAGGGC TTAGGT GCCTTTTTA TTTTTTAAATTAAAC CKL_1438 1479077 - 1480375 + | zinc protease TERM 1798 1480456 - 1480429 - f 71 -8.8 -2.78088 | opp_overlap 1480422 1480420 1480436, overlap 1480428 1480431 AAACCCTGTAATAAG TATATTATATTA CTCA TAATATAATATA ACAGATAAAACATAG CKL_1439 1480484 - 1480756 + | hypothetical protein lysC2 1481032 - 1482231 + | aspartate kinase I CKL_1441 1482288 - 1482977 + | protease TERM 1799 1482989 - 1483014 + F 70 -6.9 -4.04174 | opp_overlap 1482989 1482987, overlap 1482992 GTAGAGTACTTAAGA TCACCATAGGG GAAA TCCTATGGTAA TTTAATTGTATAAAA TERM 1800 1483014 - 1482989 - f 73 -8.4 -3.11768 | opp_overlap 1482989 1482992, overlap 1482987 GTAGAGTACTTAAGA TCACCATAGG GGAAAT CCTATGGTAA TTTAATTGTATAAAA TERM 1801 1482992 - 1483011 + F 73 -8.6 -3.05935 | opp_overlap 1482989 1482987, overlap 1482989 GAGTACTTAAGATCA CCATAGGG GAAA TCCTATGG TAATTTAATTGTATA TERM 1802 1484766 - 1484786 + G 73 -9.1 -2.87243 | opp_overlap 1484771, overlap 1484771 TTGACAAGGGCGTAA CAGAAGGAA AAA TTCCTTTTG TGGTTATAATAATAG TERM 1803 1484771 - 1484781 + G 71 -5.4 -4.59069 | opp_overlap 1484771, overlap 1484766 AAGGGCGTAACAGAA GGAA AAA TTCC TTTTGTGGTTATAAT ftsK 1483145 - 1485436 + | hypothetical protein CKL_1443 1485568 - 1486908 + | hypothetical protein pgsA 1486892 - 1487479 + | hypothetical protein recA 1487613 - 1488704 + | recombinase A CKL_1446 1489033 - 1490577 + | phosphodiesterase TERM 1804 1490656 - 1490613 - f 90 -8.4 -4.72127 | opp_overlap 1490616, overlap 1490614 1490616 ATATAACATAGAAAA GTATTCCTTTTAGATTTTGC CTTT ACAAAACCTAAAAGGAATTT TTGATTTTATGTAGA TERM 1805 1490655 - 1490614 - f 95 -11.9 -3.41649 | opp_overlap 1490616, overlap 1490613 1490616 TATAACATAGAAAAG TATTCCTTTTAGATTTTGC CTTT ACAAAACCTAAAAGGAATT TTTGATTTTATGTAG TERM 1806 1490653 - 1490616 - f 100 -14.5 -3.25888 | opp_overlap 1490616, overlap 1490614 1490613 TAACATAGAAAAGTA TTCCTTTTAGATTTTGC CTTT ACAAAACCTAAAAGGAA TTTTTGATTTTATGT TERM 1807 1490616 - 1490653 + F 100 -11.6 -5.15526 | opp_overlap 1490614 1490613 1490616 TAACATAGAAAAGTA TTCCTTTTAGATTTTG CCTTTA CAAAACCTAAAAGGAA TTTTTGATTTTATGT CKL_1447 1490726 - 1490986 + | hypothetical protein TERM 1808 1491015 - 1491038 + F 74 -6.8 -4.40804 | gap 1 TTAATGTTTGTTAAG GGACTTGAAGG GTA TCT-CAAGTCC TTTTATGAGGTACTA CKL_1448 1491151 - 1492011 + | phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase TERM 1809 1493092 - 1493105 + G 72 -2.5 -5.40474 | CTGCCAGCTATTTTA TATAT TTTA ATATA TTTTTTTAAAACACT CKL_1449 1492030 - 1493313 + | hypothetical protein CKL_1450 1493318 - 1493674 + | transporter protein TERM 1810 1493759 - 1493742 - g 93 -9.9 -4.39426 | opp_overlap 1493741 GATACTTTCAGAAAA GGCTGAA AAAA TTCAGCC ATCTATAACTTTGGC TERM 1811 1494198 - 1494165 - g 72 -2.5 -5.45813 | overlap 1494168 TACTAAAAAAGAAAA TGACTTTAAATATAC TGTA GAAGATTTAAAGGCA GCATATAGTGAAAAA TERM 1812 1494301 - 1494287 - g 73 -4.3 -5.10029 | AGGAACTTGAAAAAA TTGCA GATTT TGCAA GGGAAAAAGATATTC aspC2 1493725 - 1494918 + | aspartate aminotransferase ptsH 1494938 - 1495198 + | PtsH TERM 1813 1495255 - 1495228 - T 80 -8.6 -3.9279 | opp_overlap 1495228 AGTGAAGTTTAGAAA TAGAAGATCTTA TTTT TAAGGTCTTCTA TTTTAATTTATATTA TERM 1814 1495228 - 1495255 + T 100 -10.8 -4.67563 | opp_overlap 1495228 AGTGAAGTTTAGAAA TAGAAGATCTTA TTTT TAAGGTCTTCTA TTTTAATTTATATTA CKL_1453 1495483 - 1495268 - | hypothetical protein TERM 1815 1495623 - 1495643 + H 70 -7.7 -3.47573 | opp_overlap 1495623 1495625 TATATGTATAAAATG CACAATGAT TTG ATTATTGTG TTATAATGTGAATGG purB 1495692 - 1497122 + | adenylosuccinate lyase CKL_1455 1497235 - 1498317 + | hypothetical protein TERM 1816 1498334 - 1498370 + T 100 -14 -3.27298 | overlap 1498346 TTCAAGGTTGGGTAA GTTCTTCCTATATTCA GTATA TGAATTTAGGAAGAAC TTAATAATTAAAAAA gluS 1499872 - 1498409 - | GluS TERM 1817 1498517 - 1498504 - G 70 -8.1 -3.11222 | opp_overlap 1498504 1498505 1498506, overlap 1498503 1498506 CTGCAATTTCAAAAG CACCC CCTG GGGTG GATTTTTTACCTGAT TERM 1818 1499860 - 1499871 + g 77 -4.4 -5.28176 | GTGCAAATCTTGTTC TGAC TTTA GTCA TTTTTTCTCACTCCC TERM 1819 1499930 - 1499906 - H 72 -5 -4.99134 | ATTTTAAAGTAAAAA CCTCTCATCC TTTTT AGACGAAAGG CTACCAATTTGCTAT TERM 1820 1500116 - 1500159 + H 79 -9.5 -3.28122 | gap 1, opp_overlap 1500109 1500107 1500128 1500131, overlap 1500107 1500128 1500149 GACATATATATATGC TAT-TGATATAAATAATATA GCATA TATATTATTTATATCACATA TATCTTTGAATAATA gap 1500236 - 1501291 + | Gap TERM 1821 1501356 - 1501329 - T 82 -4.3 -5.58179 | opp_overlap 1501329 TATTATAATAAAAAA GTATTTCTATA GGATTA TGTAGAAATAC TTTTTTGTATGTTTT TERM 1822 1501329 - 1501356 + T 89 -6.5 -5.53079 | opp_overlap 1501329 TATTATAATAAAAAA GTATTTCTATA GGATTA TGTAGAAATAC TTTTTTGTATGTTTT dacA3 1502637 - 1501375 - | DacA3 TERM 1823 1501520 - 1501505 - G 74 -6.2 -4.37092 | ATTTGTTTTAGAAAA GACTTT TTTG AAAGTC CAGAATAAATTTTAT TERM 1824 1503010 - 1502998 - g 74 -4.1 -5.18866 | TTTAAAGAAAGAAAA CCACA TAT TATGG GAGAATTCAGTAAAA CKL_1459 1502959 - 1503576 + | hydrolase CKL_1460 1503618 - 1504079 + | transcriptional regulator TERM 1825 1504091 - 1504122 + F 70 -3.2 -5.33848 | gap 1, opp_overlap 1504091 GTAGTATATGAAAAA GTAGAAT-TTAAGCG TAA CATTTAATATTCTAC TTTTTTACTTGTGAT CKL_1461 1504387 - 1504554 + | hypothetical protein TERM 1826 1504626 - 1504645 + F 90 -5.8 -5.66989 | CATAATGCACCTAGG GTTTTAGA GGAA TCTAAGAC TTTTTTTAATGTTTA CKL_1462 1504852 - 1505097 + | hypothetical protein TERM 1827 1505115 - 1505145 + F 100 -12 -4.56736 | opp_overlap 1505115, overlap 1505107 GTATTCTGGCATGAA TAGGCCTATTGGGA TTT TCTCAGTAGGCTTA TTTTCATTATTACAT CKL_1463 1505313 - 1505735 + | transcriptional regulator CKL_1464 1505738 - 1506901 + | transporter protein TERM 1828 1507053 - 1506997 - T 71 -8.1 -3.20747 | gap 3, opp_overlap 1507004 1507051, overlap 1506999 1507001 1507003 ATTAAATTTGACTAA TATATAGGTCCAGTTTTATATAT-TTTA ATGT TAAAGATATATAAAACTGGAC-TAT-TA GCAAAGTTAATGTTA TERM 1829 1507052 - 1506999 - T 74 -8.8 -3.16288 | opp_overlap 1507004 1507051, overlap 1506997 1507001 1507003 TAAATTTGACTAATA TATAGGTCCAGTTTTATATAT-TTTA ATGT TAAAGATATATAAAACTGGAC-TATT AGCAAAGTTAATGTT TERM 1830 1507050 - 1507001 - T 91 -11.4 -3.13639 | opp_overlap 1507004, overlap 1506999 1506997 1507003 AATTTGACTAATATA TAGGTCCAGTTTTATATAT-TTTA ATGT TAAAGATATATAAAACTGGAC-TA TTAGCAAAGTTAATG TERM 1831 1507049 - 1507003 - T 95 -12.1 -3.12449 | gap 1, opp_overlap 1507004, overlap 1507001 1506999 1506997 TTTGACTAATATATA GGTCCAGTTTTATATAT-TTTA ATGT TAAAGATATATAAAACTGGACT ATTAGCAAAGTTAAT TERM 1832 1507004 - 1507048 + T 100 -16.9 -3.03159 | opp_overlap 1507003 1507001 1506999 1506997 TTGACTAATATATAG GTCCAGTTTTATATATTTTAA TGT TAAAGATATATAAAACTGGAC TATTAGCAAAGTTAA CKL_1465 1507637 - 1507143 - | hypothetical protein TERM 1833 1507675 - 1507695 + H 71 -7.7 -3.68366 | TATTATTATAGTACC TTTAAGTGG TTT TCACTTAAA TTCCTTTTCAAATAA TERM 1834 1508025 - 1508076 + H 80 -7.7 -4.57073 | opp_overlap 1508007 1508025 1508032 1508035, overlap 1508028 1508032 1508035 1508038 TAATTATTTTAAAAA TATTACACAATAACTATACAAAA GATATA TTTTGTATAGTTATTGTAATATA TTTTTGAAAAAAATG TERM 1835 1508076 - 1508025 - H 100 -9.9 -4.64598 | opp_overlap 1508025 1508028 1508032 1508035 1508038, overlap 1508007 1508032 1508035 TAATTATTTTAAAAA TATTACACAATAACTATACAAAA GATATA TTTTGTATAGTTATTGTAATATA TTTTTGAAAAAAATG TERM 1836 1508028 - 1508074 + H 75 -7.8 -3.90048 | gap 1, opp_overlap 1508007 1508025 1508032 1508035, overlap 1508025 1508032 1508035 1508038 TTATTTTAAAAATAT TA-CACAATAACTATACAAAA GATATA TTTTGTATAGTTATTGTAATA TATTTTTGAAAAAAA TERM 1837 1508032 - 1508069 + H 100 -14.6 -2.89632 | opp_overlap 1508025 1508032 1508035, overlap 1508028 1508025 1508035 1508038 TTTAAAAATATTACA CAATAACTATACAAAA GATATA TTTTGTATAGTTATTG TAATATATTTTTGAA TERM 1838 1508069 - 1508032 - H 100 -14.6 -3.05832 | opp_overlap 1508032 1508028 1508025 1508035 1508038, overlap 1508025 1508035 TTTAAAAATATTACA CAATAACTATACAAAA GATATA TTTTGTATAGTTATTG TAATATATTTTTGAA TERM 1839 1508066 - 1508035 - H 88 -10.5 -3.65046 | opp_overlap 1508035 1508032 1508028 1508025 1508038, overlap 1508032 1508025 AAAAATATTACACAA TAACTATACAAAA GATATA TTTTGTATAGTTA TTGTAATATATTTTT TERM 1840 1508035 - 1508066 + H 88 -10.5 -3.57173 | opp_overlap 1508032 1508025 1508035, overlap 1508032 1508028 1508025 1508038 AAAAATATTACACAA TAACTATACAAAA GATATA TTTTGTATAGTTA TTGTAATATATTTTT TERM 1841 1508038 - 1508063 + H 75 -7.8 -3.88777 | opp_overlap 1508035 1508032 1508025, overlap 1508035 1508032 1508028 1508025 AATATTACACAATAA CTATACAAAA GATATA TTTTGTATAG TTATTGTAATATATT TERM 1842 1508247 - 1508266 + H 74 -2.2 -5.74086 | opp_overlap 1508223 ATATATCTTTTGTTT TAATAAGT ATGT ACTAATTA TTTTTTGTTTAGTTT TERM 1843 1508885 - 1508856 - g 72 -5.9 -4.39877 | gap 1, opp_overlap 1508863, overlap 1508863 CGAAGAAGCAATAAA GTCAAAAGA-AGAA TTC TTCTATCTTATGAC CCATGAGTTCAAAAC CKL_1466 1508350 - 1509663 + | sensor kinase CKL_1467 1511378 - 1509897 - | nicotinate phosphoribosyltransferase CKL_1468 1511519 - 1513531 + | ATP-dependent DNA helicase kdpD 1513702 - 1516398 + | hypothetical protein TERM 1844 1517039 - 1517025 - g 74 -4.2 -5.20633 | AAAAAGATAGAAAAA GAGCCT TCA AAGCCC AAATACATTCAAACT kdpE 1516395 - 1517111 + | KdpE kdpA 1517539 - 1519257 + | potassium-transporting ATPase subunit A kdpB 1519271 - 1521325 + | potassium-transporting ATPase subunit B TERM 1845 1522109 - 1522087 - g 74 -6.2 -4.42235 | opp_overlap 1522087, overlap 1522075 1522084 AATTGTTAAAAATAA CACGCAAGGC AAA GCCTTTGGTG TTTTTGGAGAGAAAA TERM 1846 1522087 - 1522109 + G 76 -6.2 -4.56597 | opp_overlap 1522075 1522084 1522087 AATTGTTAAAAATAA CACGCAAGGC AAA GCCTTTGGTG TTTTTGGAGAGAAAA kdpC 1521557 - 1522189 + | hypothetical protein CKL_1474 1522733 - 1522461 - | hypothetical protein CKL_1475 1523379 - 1522771 - | hypothetical protein CKL_1476 1524041 - 1523493 - | hydrolase TERM 1847 1523559 - 1523571 + g 78 -9.1 -3.44325 | opp_overlap 1523559 CAACAAATCGAAGAA CACCG TTT CGGTG TTACTTATCACAGCT TERM 1848 1523571 - 1523559 - G 81 -9.1 -3.81626 | opp_overlap 1523559 CAACAAATCGAAGAA CACCG TTT CGGTG TTACTTATCACAGCT TERM 1849 1524461 - 1524508 + H 85 -10.2 -3.48772 | overlap 1524464 AAGAGATCTTAATAT TTATTTCTTTTCTCTTTAGTGT GGCT GCATTAAAGAGAAAAGAGGTGG TTCTGTGAAAAAATT TERM 1850 1524464 - 1524505 + H 93 -11.9 -2.88822 | overlap 1524461 AGATCTTAATATTTA TTTCTTTTCTCTTTAGTGT GGCT GCATTAAAGAGAAAAGAGG TGGTTCTGTGAAAAA TERM 1851 1524865 - 1524845 - g 77 -8.3 -3.78235 | opp_overlap 1524847, overlap 1524847 CCATAACTAATATAA TAGCAGGTA TTT TACCTGCTG TGCTGTGGAGGATCA TERM 1852 1524847 - 1524863 + G 83 -10.9 -2.8547 | opp_overlap 1524845 1524847 ATAACTAATATAATA GCAGGTA TTT TACCTGC TGTGCTGTGGAGGAT TERM 1853 1524863 - 1524847 - g 87 -10.9 -3.46512 | opp_overlap 1524847, overlap 1524845 ATAACTAATATAATA GCAGGTA TTT TACCTGC TGTGCTGTGGAGGAT TERM 1854 1525137 - 1525162 + G 70 -6.3 -4.17089 | opp_overlap 1525137, overlap 1525140 CTATAGTTTTATAAA CAATTACTATT TTAA GATGGTAATTG TTTTAGGCATTTCGG CKL_1477 1524580 - 1525371 + | hypothetical protein TERM 1855 1525421 - 1525456 + F 79 -9.4 -3.30006 | opp_overlap 1525421 ATATGTAAAGTGAAA TTTTAATATACATTAT AAAT ATTATGTATATTAAAA TTAATGTAAATTAGT TERM 1856 1525456 - 1525421 - f 86 -9.4 -3.86311 | opp_overlap 1525421 ATATGTAAAGTGAAA TTTTAATATACATTAT AAAT ATTATGTATATTAAAA TTAATGTAAATTAGT TERM 1857 1525674 - 1525631 - f 81 -9.8 -3.05647 | opp_overlap 1525634, overlap 1525634 1525636 TGCTAACTAGAGAGA CTAGAGGCTGTATTTTATTA TGTA TAATAAGATACAGCCTCTTT AATATTAACTATATC TERM 1858 1525671 - 1525634 - f 100 -15.9 -2.74485 | opp_overlap 1525634, overlap 1525631 1525636 TAACTAGAGAGACTA GAGGCTGTATTTTATTA TGTA TAATAAGATACAGCCTC TTTAATATTAACTAT TERM 1859 1525634 - 1525671 + F 100 -18.1 -3.94184 | opp_overlap 1525634 1525631 1525636 TAACTAGAGAGACTA GAGGCTGTATTTTATTA TGTA TAATAAGATACAGCCTC TTTAATATTAACTAT TERM 1860 1525669 - 1525636 - f 100 -12.7 -2.91065 | opp_overlap 1525634, overlap 1525634 1525631 ACTAGAGAGACTAGA GGCTGTATTTTATTA TGTA TAATAAGATACAGCC TCTTTAATATTAACT TERM 1861 1526451 - 1526430 - g 74 -3.1 -5.4492 | TATATACATAAAAAA TAATATAAC AATA GGTATATTA ATGATAGCCTGTATA CKL_1478 1525807 - 1527582 + | methyl-accepting chemotaxis protein TERM 1862 1527728 - 1527690 - f 70 -8.4 -2.7371 | overlap 1527689 ATATTATTATATAAT TCTATTAGGCTCATAT AGTTAAA ATATGAGCCTAATAAG CATAGAAAAAGAGGT CKL_1479 1527750 - 1529831 + | FtsA-related protein TERM 1863 1529967 - 1529985 + G 73 -7.6 -3.61715 | opp_overlap 1529967 1529966 1529963 TGAAGAGGAAAGAAC TTCTTTTA AAA TAAAAGAA TTCTTAAAAAAAATA CKL_1480 1529860 - 1531032 + | amidohydrolase rluD2 1531277 - 1532236 + | RluD2 CKL_1482 1532280 - 1533905 + | stage V sporulation protein B TERM 1864 1533924 - 1533890 - T 88 -10.3 -3.60431 | gap 1, opp_overlap 1533891 1533892 1533897, overlap 1533892 1533897 AAAAGCATTCTTAAA GAGAAAACTTCTATGA ATGA CCATAGAAGTTTTC-C TTTATAATTTCATGC TERM 1865 1533891 - 1533924 + T 91 -9.8 -4.15841 | opp_overlap 1533890 1533892 1533897, overlap 1533892 1533897 AAAGCATTCTTAAAG AGAAAACTTCTATG AATGAC CATAGAAGTTTTCC TTTATAATTTCATGC TERM 1866 1533923 - 1533892 - T 100 -14 -3.37259 | opp_overlap 1533891 1533892 1533897, overlap 1533890 1533897 AAGCATTCTTAAAGA GAAAACTTCTATGA ATGA CCATAGAAGTTTTC CTTTATAATTTCATG TERM 1867 1533892 - 1533923 + T 100 -13.3 -3.08782 | opp_overlap 1533892 1533890 1533897, overlap 1533891 1533897 AAGCATTCTTAAAGA GAAAACTTCTATG AATGAC CATAGAAGTTTTC CTTTATAATTTCATG TERM 1868 1533918 - 1533897 - T 87 -8.1 -4.78848 | opp_overlap 1533892 1533891 1533897, overlap 1533892 1533890 TTCTTAAAGAGAAAA CTTCTATGA ATGA CCATAGAAG TTTTCCTTTATAATT TERM 1869 1533897 - 1533918 + T 81 -7.4 -4.64383 | opp_overlap 1533897 1533892 1533890, overlap 1533892 1533891 TTCTTAAAGAGAAAA CTTCTATG AATGAC CATAGAAG TTTTCCTTTATAATT CKL_1483 1535231 - 1533900 - | stage V sporulation protein B CKL_1484 1535426 - 1536733 + | hypothetical protein CKL_1485 1536753 - 1537469 + | hypothetical protein TERM 1870 1537459 - 1537478 + F 90 -5.7 -5.69068 | opp_overlap 1537459, overlap 1537461 TAAAAAACTTTAAAA TTCTCCC ATAAAA GGGAGGA TTTTTTATATTTTTC CKL_1486 1537551 - 1538060 + | hypothetical protein TERM 1871 1538496 - 1538506 + G 86 -4 -5.89947 | opp_overlap 1538489 1538496 AAGGGAAAGAAAATA TTGA TTC TCAA TTTTTTTTGGATTTA CKL_1487 1538087 - 1539802 + | hypothetical protein CKL_1488 1539874 - 1540371 + | hypothetical protein TERM 1872 1540393 - 1540416 + F 79 -6.8 -4.73108 | opp_overlap 1540393 1540388, overlap 1540388 GTAGATGTAATTAAA GAACAGTATG TTTT TATGCTGTTC TTTTACTTTTGTAGG TERM 1873 1540753 - 1540769 + F 77 -5.3 -5.08824 | AAGGATGTAAAGCTT TTATTAA ACT TTAATAA TTTTTTAAATAGGGG hprK 1540869 - 1541795 + | HPr kinase/phosphorylase CKL_1490 1541788 - 1542333 + | 5-formyltetrahydrofolate cyclo-ligase-related protein CKL_1491 1542583 - 1543977 + | transport protein TERM 1874 1544168 - 1544194 + F 83 -6.8 -4.89233 | opp_overlap 1544156 1544168 AATTCACACTCCAAA TAGTATGATT TAACAAT AATCATACTA TTTTTGCTATTACTA TERM 1875 1544228 - 1544246 + F 75 -5.9 -4.66987 | opp_overlap 1544229, overlap 1544229 ATCTTTATATAAAAA ACCCTGG TGACT CCAGGGC TTTTATTAAAATATA TERM 1876 1544245 - 1544229 - f 100 -9.4 -5.36441 | opp_overlap 1544229 1544228 TCTTTATATAAAAAA CCCTGG TGACT CCAGGG CTTTTATTAAAATAT TERM 1877 1544229 - 1544245 + F 82 -9.4 -3.39469 | opp_overlap 1544229, overlap 1544228 TCTTTATATAAAAAA CCCTGG TGACT CCAGGG CTTTTATTAAAATAT TERM 1878 1545190 - 1545204 + G 71 -8.6 -2.98223 | ATACTCCATGCACTT TGGGAT GGT ATCCCA TATATAATGTCAATA CKL_1492 1544506 - 1545348 + | hypothetical protein TERM 1879 1545364 - 1545384 + F 100 -7.1 -5.63517 | opp_overlap 1545364 TTTCTACATAAAAAA TTAATATAA TTA TTATATTAA TTTTTTATTTGAGGA TERM 1880 1545384 - 1545364 - f 91 -7.1 -5.36441 | opp_overlap 1545364 TTTCTACATAAAAAA TTAATATAA TTA TTATATTAA TTTTTTATTTGAGGA CKL_1493 1545410 - 1546108 + | transcriptional regulator TERM 1881 1546822 - 1546802 - g 70 -6.2 -4.28115 | overlap 1546799 ATCTACAATAAATAA TCTTGCAG AAACA CTGCAAAA CCAGGAAAATTTAAG TERM 1882 1547293 - 1547261 - g 72 -3.5 -5.18726 | overlap 1547262 1547264 1547265 GGTGGATAATAAAAA TGAGTATCTTGAACT AAT AGTTCAAGATAATGG ACAGGGAATACCAAA TERM 1883 1547290 - 1547264 - g 80 -9.6 -3.42342 | overlap 1547262 1547261 1547265 GGATAATAAAAATGA GTATCTTGAACT AAT AGTTCAAGATAA TGGACAGGGAATACC TERM 1884 1547289 - 1547265 - g 100 -13.1 -2.6432 | overlap 1547264 1547262 1547261 GATAATAAAAATGAG TATCTTGAACT AAT AGTTCAAGATA ATGGACAGGGAATAC CKL_1494 1546110 - 1547495 + | sensory transduction histidine kinase TERM 1885 1547529 - 1547502 - T 100 -13 -5.20534 | opp_overlap 1547502 ATCAAGTAATAAAAA GGTTACAATATT TCAA AATATTGTAACC TTTTTTTAGAGATGT TERM 1886 1547502 - 1547529 + T 100 -13 -5.42862 | opp_overlap 1547502 ATCAAGTAATAAAAA GGTTACAATATT TCAA AATATTGTAACC TTTTTTTAGAGATGT CKL_1495 1548254 - 1547547 - | methyltransferase CKL_1496 1548731 - 1548270 - | protease TERM 1887 1548559 - 1548574 + g 79 -2.6 -5.71712 | TTTTTTAATGTTATT TTATCT ACTC GGATAA TTTTTTTATCTACAA CKL_1497 1549528 - 1548881 - | transferase TERM 1888 1549468 - 1549483 + g 71 -7.6 -3.40522 | opp_overlap 1549468 CATCGTGGTCACTAA GCAAGT TAGA ACTTGC TTGTAATAAAACAAT TERM 1889 1549653 - 1549643 - g 70 -4.6 -4.86861 | opp_overlap 1549643 TAATAAACAAATAAA GCCC TAT GAGC TGCTTGAATATATAA CKL_1498 1549557 - 1550186 + | FixC protein CKL_1499 1550186 - 1550479 + | FixX-related protein TERM 1890 1550491 - 1550531 + F 78 -9.3 -3.05819 | overlap 1550497 ATAGTATATTTAATT GTAAAAGGTTTTGGTAAAT TTT ATTTGCTGAAACCTTTTAG TATTGCAGGTGTATC TERM 1891 1550497 - 1550525 + F 81 -8.3 -4.4261 | overlap 1550491 TATTTAATTGTAAAA GGTTTTGGTAAAT TTT ATTTGCTGAAACC TTTTAGTATTGCAGG CKL_1500 1550725 - 1551066 + | hypothetical protein TERM 1892 1551169 - 1551128 - f 76 -7.1 -4.26475 | gap 1, opp_overlap 1551130 1551132 1551134 1551138, overlap 1551126 ATTGTATAAAAAATA TATATATTAACTAAATTCAT TCG AT-AATTTAGTTGATATATA CTTCAAACAAAGGTT CKL_1501 1551254 - 1551859 + | hypothetical protein TERM 1893 1551881 - 1551903 + T 72 -4.8 -4.91778 | TTTGAACAGAACAGG CAGCTTATCT TGT GGGTTAGCTG TTTATTTTGTGTTTA TERM 1894 1552470 - 1552488 + T 75 -8.8 -3.37053 | overlap 1552471 TATACGGTTCTTCTT GGCAGGCA TAT TGCCTGCA TTAGTTAAAATGTCT TERM 1895 1552471 - 1552487 + T 93 -12.3 -2.6175 | overlap 1552470 ATACGGTTCTTCTTG GCAGGCA TAT TGCCTGC ATTAGTTAAAATGTC CKL_1502 1553665 - 1552562 - | transposase TERM 1896 1552681 - 1552668 - G 71 -6.7 -4.11484 | TTGAACTTCTCAAAA GCCAT GCGC ATGGC TAGGATACATGGACC TERM 1897 1554096 - 1554054 - H 100 -22.6 -3.51924 | opp_overlap 1554054 TTTTCAGTGATATAA TTAGCATATATTGATAATGA ATT TCATTATCAATATATGCTAA TTTAATTATGTTTTA TERM 1898 1554054 - 1554096 + H 100 -22.6 -4.13911 | opp_overlap 1554054 TTTTCAGTGATATAA TTAGCATATATTGATAATGA ATT TCATTATCAATATATGCTAA TTTAATTATGTTTTA TERM 1899 1554162 - 1554148 - H 78 -5.6 -4.98531 | overlap 1554149 GCCTGAAACTAAAAA CCGCCT GCT ATGCGG GTGAGATTAAATGCT CKL_1503 1554646 - 1555407 + | thioesterase TERM 1900 1556833 - 1556823 - g 80 -5.4 -5.14645 | opp_overlap 1556828 AGAAGTTAACAAAAA CTGT ATA ACAG AAGATTGTTATTTTA CKL_1504 1555618 - 1557213 + | aryl acid activating protein TERM 1901 1559239 - 1559207 - g 77 -7.9 -4.06491 | opp_overlap 1559218, overlap 1559209 GTAATTTCAGATAAA GACACTATTAATAGA GTA TCTATTAATAGTGAA AATGTCATATATGTT TERM 1902 1559237 - 1559209 - g 100 -14.9 -3.62348 | opp_overlap 1559218, overlap 1559207 AATTTCAGATAAAGA CACTATTAATAGA GTA TCTATTAATAGTG AAAATGTCATATATG CKL_1505 1557233 - 1563451 + | nonribosomal peptide synthetase TERM 1903 1564423 - 1564409 - g 80 -5.8 -4.97405 | ACGTACAAAAAGAAA TTTTAG TTT CTAAAA AATGGAGTTTAATAA CKL_1506 1563460 - 1564521 + | NRPS reductase domain containing protein CKL_1507 1564529 - 1565974 + | NRPS cyclization domain containing protein CKL_1508 1566015 - 1567502 + | NRPS methlyase and thiolation domain containing protein TERM 1904 1568095 - 1568081 - g 73 -4.3 -4.99134 | opp_overlap 1568081 ATTGGAAATGAAAAA TGGAA TACAC TTCCA TATATCGATGAGAGA CKL_1509 1567499 - 1568575 + | hypothetical protein TERM 1905 1569605 - 1569587 - g 85 -4.7 -5.59962 | opp_overlap 1569587 GAAAACAAAGAAAAA TTTCTTT TGCTC AAAGAAA TAGAAAATTTTAAAA CKL_1510 1568576 - 1569652 + | NRPS reductase domain containing protein TERM 1906 1570909 - 1570919 + G 74 -6.8 -4.23213 | opp_overlap 1570895 1570893 1570909 ATGGTATTTCTCAAA CACC ACA GGTG TTTATTGACTGTCAA TERM 1907 1571158 - 1571142 - g 73 -4.5 -5.06505 | AATGATACAGAAAAA GTATTTT TAA AAAACAC ACTAATTTTTGACTT CKL_1511 1569645 - 1575020 + | nonribosomal peptide synthetase TERM 1908 1575201 - 1575213 + G 71 -2 -5.50499 | AGTGAACATACTCCA TTGA AAAAA TCAA TTTTTTTAGCTGTAA CKL_1512 1575141 - 1576883 + | transport protein, ATPase and permease component TERM 1909 1576934 - 1576902 - g 72 -2.7 -5.47218 | overlap 1576906 GTGCATTGAAAAAAA TATGGGAGTTTTCCG GTA CGGAAAAGCACAATA TCAATAAGTCTATCC CKL_1513 1576880 - 1578622 + | transport protein, ATPase and permease component CKL_1514 1578678 - 1578974 + | hypothetical protein CKL_1515 1578914 - 1579261 + | hypothetical protein CKL_1516 1579261 - 1579989 + | transporter TERM 1910 1580711 - 1580697 - g 86 -7.2 -4.7629 | opp_overlap 1580696 TGATGAATTTAAAAA TCTTTC AGA GAAAGA ATTACATCAAAAGGG TERM 1911 1580850 - 1580828 - g 79 -3.5 -5.70829 | opp_overlap 1580831, overlap 1580831 AATATGATAAAAAAA TATTTTTGG ATATA CCAAAATTA GATATACCCAGGAAT CKL_1517 1580005 - 1581471 + | transporter CKL_1518 1581665 - 1583017 + | efflux pump CKL_1519 1583078 - 1583422 + | hypothetical protein CKL_1520 1583301 - 1583597 + | glycosyltransferase-like protein TERM 1912 1583656 - 1583678 + F 100 -10 -5.22006 | opp_overlap 1583658 1583660 ACTTTTGTTTTTTAA GATAGAAGGT TAT ACTTTCTATC TTTTTATTATGCTAA CKL_1521 1583822 - 1584610 + | ABC transporter ATPase TERM 1913 1584773 - 1584759 - g 72 -3.6 -5.30189 | TACAATATTAAAAAA TTCTTC TAA AAAGAA AAGTGAAAATGAAAA CKL_1522 1584616 - 1586241 + | hypothetical protein CKL_1523 1586563 - 1587261 + | phosphopantetheinyl transferase CKL_1524 1587266 - 1587973 + | thioesterase CKL_1525 1588258 - 1593945 + | nonribosomal peptide synthetase TERM 1914 1594050 - 1594066 + G 70 -8 -3.06796 | CCTGGGAACTGCAAT GGGGAT CATAA ATCCCC TTGCATCCACTCACC CKL_1526 1593952 - 1595127 + | transporter protein TERM 1915 1596506 - 1596492 - g 70 -4.2 -4.96468 | opp_overlap 1596500, overlap 1596500 GAAATTCAAATAAAA GGTGAC AAT GTTACC TCAGGTTACATTAAT TERM 1916 1598370 - 1598383 + G 71 -6.7 -4.09685 | opp_overlap 1598368 TTAAGTGAAGTTAGA GCTCT AGAC AGAGC TTTTAAAAGGTGGAG TERM 1917 1598798 - 1598788 - g 72 -2.6 -5.40004 | CATTAAATCAAAAAA TAAA AAA TTTA GTAGAACATCTTAAA CKL_1527 1595208 - 1604426 + | polyketide synthase CKL_1528 1604480 - 1604881 + | hypothetical protein CKL_1529 1604874 - 1605260 + | hypothetical protein CKL_1530 1605708 - 1605556 - | transposase CKL_1531 1606560 - 1606027 - | transposase TERM 1918 1606807 - 1606787 - g 80 -5.5 -5.27335 | opp_overlap 1606789, overlap 1606789 TTTTCCAAATAAAAA CAGTTGAAT CTT ATCCAACTA ATTATAATGGAGTTG CKL_1532 1606684 - 1607163 + | flavodoxin TERM 1919 1608059 - 1608046 - g 71 -8.1 -3.29459 | CAGTGAAGAATTGAA CTGCC GTAT GGCAG AATACGCCAAAGCAG CKL_1533 1607282 - 1608412 + | hypothetical protein TERM 1920 1608523 - 1608481 - f 100 -18 -4.0342 | opp_overlap 1608485 1608490, overlap 1608490 GCTAATGAATAACAA TCAACAAAATAGTCCCCGAA TGA TTTGGGGGCTATTTTGTTGA TAAAATCCATGTCTC TERM 1921 1608485 - 1608519 + F 100 -17.4 -3.16881 | opp_overlap 1608481 1608490, overlap 1608490 ATGAATAACAATCAA CAAAATAGTCCCCGAA TGA TTTGGGGGCTATTTTG TTGATAAAATCCATG TERM 1922 1608490 - 1608514 + F 100 -11.5 -4.71828 | opp_overlap 1608481 1608490, overlap 1608485 TAACAATCAACAAAA TAGTCCCCGAA TGA TTTGGGGGCTA TTTTGTTGATAAAAT TERM 1923 1608514 - 1608490 - f 85 -7.1 -4.84262 | opp_overlap 1608490 1608485, overlap 1608481 TAACAATCAACAAAA TAGTCCCCGAA TGA TTTGGGGGCTA TTTTGTTGATAAAAT TERM 1924 1608964 - 1608950 - g 72 -2.8 -5.41143 | CAGCTTGCAAAAAAA CATCCC AAT GAAATG TATATTAATGGACCA CKL_1534 1608728 - 1609570 + | polysaccharide deacetylase TERM 1925 1609608 - 1609596 - T 74 -2.7 -5.58179 | TACGACAACAAAAAA CACAA CAG TTGTA CCCAAAATATTCGAA CKL_1535 1610313 - 1609702 - | transcriptional regulator TERM 1926 1609863 - 1609876 + g 71 -5.2 -4.59773 | CAAGTCGGATTTCTC CGCG AAGTTC CGCG TTTTTCAAAATCACC CKL_1536 1610473 - 1611891 + | transporter protein TERM 1927 1611958 - 1611983 + F 91 -7.7 -5.31275 | opp_overlap 1611958 1611961 TTATTTTTAAATGAA GAACTACAAAC GGTC GTTTTTAGTTC TTTTTTCTAATAGAA TERM 1928 1611983 - 1611958 - f 71 -7.7 -3.52204 | opp_overlap 1611958, overlap 1611961 TTATTTTTAAATGAA GAACTACAAAC GGTC GTTTTTAGTTC TTTTTTCTAATAGAA TERM 1929 1612360 - 1612344 - g 71 -2.3 -5.36441 | TTCTCATAGAAAAAA TTTTGAA ATA TGCAAAA GAACGAAATTATGTA CKL_1537 1612283 - 1613647 + | hypothetical protein CKL_1538 1613787 - 1614725 + | hypothetical protein TERM 1930 1614768 - 1614798 + F 84 -4.2 -5.88471 | overlap 1614758 TATTGTGATAAAATA TAAATGGTAATA AAATGAA TGTTACCATTTG TTTTTTTTCATAGTA TERM 1931 1615578 - 1615601 + G 75 -8.2 -3.61178 | gap 1 GCTGAACTGGAGGTA GTTCCT-GCAG GAC CTGCCAGGGAC TTTGGCCTGGATAGA CKL_1539 1614849 - 1616249 + | putative aminopeptidase 1 TERM 1932 1616290 - 1616257 - T 74 -2.6 -5.64304 | opp_overlap 1616257 GAATATAACAAAAAA TGCTGTATAATT TGAAATTTTT AGTTATACAGCA TTTTTAGTACATGTA TERM 1933 1616257 - 1616290 + T 79 -6.9 -4.76041 | opp_overlap 1616257 GAATATAACAAAAAA TGCTGTATAATTTGA AATT TTTAGTTATACAGCA TTTTTAGTACATGTA CKL_1540 1617167 - 1616319 - | hydrolase TERM 1934 1616634 - 1616652 + g 70 -3.8 -5.06414 | opp_overlap 1616624, overlap 1616624 TTGAAGCATTTTTAT GCCTTCTA ATG TGGAAAGC TTTTTATTGGGAACA TERM 1935 1617098 - 1617116 + g 83 -8.2 -4.18018 | TTTTTGAATTAGTTA CTATTTCC GCA GGAGATAG TTTTCCGTCAGAAGC CKL_1541 1617518 - 1617228 - | hypothetical protein TERM 1936 1617659 - 1617613 - R 88 -9.1 -4.57063 | gap 1, opp_overlap 1617624, overlap 1617624 TTAAAATAGAATAAA CATGAATTAAAGTCAGATGAAA TAAA TTTCATCTGACTTTT-TTAATG CAATTTAATATACTT TERM 1937 1617624 - 1617649 + r 100 -13.5 -5.16237 | opp_overlap 1617613 1617624 TAAACATGAATTAAA GTCAGATGAAA TAAA TTTCATCTGAC TTTTTTAATGCAATT TERM 1938 1617649 - 1617624 - R 100 -13.5 -4.02075 | opp_overlap 1617624, overlap 1617613 TAAACATGAATTAAA GTCAGATGAAA TAAA TTTCATCTGAC TTTTTTAATGCAATT CKL_1542 1618042 - 1617716 - | hypothetical protein CKL_1543 1618329 - 1618691 + | hypothetical protein TERM 1939 1618781 - 1618817 + F 91 -8.2 -5.10767 | TTAGAATAATTTTTA CACACCAAAATAGA TAAATTACT TCAATTTTGGTGTG TTTTTGTATTGAATA CKL_1544 1619023 - 1619454 + | hemerythrin-related protein TERM 1940 1619556 - 1619514 - f 79 -9.5 -3.20207 | opp_overlap 1619514 1619527 AATACCATTGACTAA TATTTACTTATAGTACATA ATGTA TTTGTACTATAAGTGAATA TTTAAGATAGAGGTG TERM 1941 1619514 - 1619556 + F 95 -11.7 -3.60296 | opp_overlap 1619514, overlap 1619527 AATACCATTGACTAA TATTTACTTATAGTACATA ATGTA TTTGTACTATAAGTGAATA TTTAAGATAGAGGTG TERM 1942 1619760 - 1619787 + F 74 -4.8 -5.02439 | opp_overlap 1619763, overlap 1619763 ATATTTTTATATTTA TAACCTTGGGTG TACA CTCTCAAGGCTA TTTTTATGCTTATCT CKL_1545 1619852 - 1621309 + | amino acid permease TERM 1943 1621330 - 1621359 + F 100 -12.3 -5.80951 | opp_overlap 1621330 ACTTTAATTGATTAA TTGCTGGAGAACA GTTG TGTTTTCCGGCAA TTTTTTATTTTGCAT aspA1 1621571 - 1622983 + | aspartate ammonia-lyase galE 1623103 - 1624089 + | hypothetical protein TERM 1944 1624254 - 1624278 + F 95 -7.9 -5.53436 | TGTGATAGGAGGAGG CCGTCTCTT AAGATAA AAGAGGCGG TTTTTTATATTATAT argS 1624532 - 1626232 + | arginyl-tRNA synthetase TERM 1945 1626260 - 1626287 + F 83 -10 -3.30124 | gap 1 ATATTTTATCTGAAG GCTGTCAGAGCTA TAC TGGCTCTGA-AGC TTGTCGAAGGTAGGA TERM 1946 1627041 - 1627029 - g 72 -4.9 -4.75356 | overlap 1627021 AAAGATATTTAAAAA TTCTT TTA AAGAA AAATAATGTAGATTT CKL_1549 1626374 - 1627171 + | hypothetical protein CKL_1550 1627270 - 1627647 + | hypothetical protein TERM 1947 1627641 - 1627662 + F 70 -5.2 -4.59109 | opp_overlap 1627641, overlap 1627631 TTATGTAATTAAAAA GTCTTGAT TTTATT ATCAGGAC TTTTTAAAAAATATA CKL_1551 1627777 - 1628502 + | hypothetical protein TERM 1948 1628708 - 1628695 - g 84 -5.3 -5.4492 | TATATATACAAAAAA CCTAT ATGT ATAGG GGTGTTTGGATGCTG CKL_1552 1628566 - 1629222 + | hypothetical protein TERM 1949 1629251 - 1629282 + F 100 -9.8 -5.68489 | opp_overlap 1629237 1629256, overlap 1629236 ATTATATCTGTGATA TAAAAGTTTTTGTA CATT TATAAAAACTTTTA TTTTTTATTATTGTA TERM 1950 1629480 - 1629434 - f 80 -8.4 -3.93136 | opp_overlap 1629438, overlap 1629438 1629443 1629446 ATATTTATTTATAAA GTCATATAATAACTACATATTT AAA AAATATGTAGTTATTATATTTT TATAGGCAATTATGA TERM 1951 1629438 - 1629476 + F 100 -18 -4.84017 | opp_overlap 1629434 1629438 1629443 1629446 TTATTTATAAAGTCA TATAATAACTACATATTT AAA AAATATGTAGTTATTATA TTTTTATAGGCAATT TERM 1952 1629476 - 1629438 - f 100 -18 -2.71325 | opp_overlap 1629438, overlap 1629434 1629443 1629446 TTATTTATAAAGTCA TATAATAACTACATATTT AAA AAATATGTAGTTATTATA TTTTTATAGGCAATT TERM 1953 1629471 - 1629443 - f 100 -13.5 -3.58869 | opp_overlap 1629438, overlap 1629438 1629434 1629446 TATAAAGTCATATAA TAACTACATATTT AAA AAATATGTAGTTA TTATATTTTTATAGG TERM 1954 1629468 - 1629446 - f 95 -10.8 -3.91364 | opp_overlap 1629438, overlap 1629443 1629438 1629434 AAAGTCATATAATAA CTACATATTT AAA AAATATGTAG TTATTATATTTTTAT argC 1629517 - 1630551 + | N-acetyl-gamma-glutamyl-phosphate reductase argJ 1630577 - 1631797 + | hypothetical protein TERM 1955 1632401 - 1632367 - g 72 -8.8 -3.04598 | ATAAATGCAGATACA TGTACTTTTAAAATTG CGG CAGCTTTAAAAGCACA AAATTTAATACTTCT argB 1631815 - 1632666 + | hypothetical protein argD 1632679 - 1633851 + | hypothetical protein TERM 1956 1633876 - 1633903 + F 100 -7.2 -5.69262 | gap 1, opp_overlap 1633870 1633876 TTAAATCAAGCAAAG GAAATCTGCTGTG ATT CA-AGTAGATTTC TTTTTATTTTTATAA TERM 1957 1634114 - 1634126 + G 81 -4.1 -5.56264 | GGATATAGCCAATGA TTCTC AGG GGGAA TTTTTTATATTTCAA CKL_1557 1633995 - 1634894 + | hypothetical protein CKL_1558 1635075 - 1635572 + | S-ribosylhomocysteinase TERM 1958 1635741 - 1635686 - T 100 -15.7 -4.02253 | opp_overlap 1635688 1635696, overlap 1635687 1635696 GGAAGAACTTATAAA GGCGCTAAAATCAGCTAATCCCCCA GCTTCT TTGGGAATTAGCTGATTTTAGCGTT TGGGTAAGTTCTTTT TERM 1959 1635740 - 1635687 - T 100 -19.2 -3.00629 | opp_overlap 1635688 1635696, overlap 1635686 1635696 GAAGAACTTATAAAG GCGCTAAAATCAGCTAATCCCCCA GCTTCT TTGGGAATTAGCTGATTTTAGCGT TTGGGTAAGTTCTTT TERM 1960 1635688 - 1635739 + T 100 -21.2 -3.69734 | opp_overlap 1635687 1635686 1635696, overlap 1635696 AAGAACTTATAAAGG CGCTAAAATCAGCTAATCCCCCAG CTTC TTTGGGAATTAGCTGATTTTAGCG TTTGGGTAAGTTCTT TERM 1961 1635696 - 1635731 + T 91 -9.8 -4.24404 | opp_overlap 1635687 1635686 1635696, overlap 1635688 ATAAAGGCGCTAAAA TCAGCTAATCCCCCAG CTTC TTTGGGAATTAGCTGA TTTTAGCGTTTGGGT TERM 1962 1635731 - 1635696 - T 95 -11.3 -4.13343 | opp_overlap 1635696 1635688, overlap 1635687 1635686 ATAAAGGCGCTAAAA TCAGCTAATCCCCCA GCTTCT TTGGGAATTAGCTGA TTTTAGCGTTTGGGT CKL_1559 1636528 - 1635770 - | molybdopterin/thiamine biosynthesis protein CKL_1560 1636834 - 1637661 + | hydrolase CKL_1561 1637808 - 1639199 + | glycosyltransferase TERM 1963 1639197 - 1639241 + F 100 -12.6 -3.73414 | opp_overlap 1639197 1639200 1639203, overlap 1639200 1639205 ATACAGGAAGTAGAA TAATAAGATTAATCCTCAAT GTATG ACTGAGGATTAATTTTATTA TTTAAATATACTATA TERM 1964 1639241 - 1639197 - f 100 -12.6 -3.55889 | opp_overlap 1639197 1639200 1639205, overlap 1639200 1639203 ATACAGGAAGTAGAA TAATAAGATTAATCCTCAAT GTATG ACTGAGGATTAATTTTATTA TTTAAATATACTATA TERM 1965 1639200 - 1639238 + F 91 -9.9 -3.99315 | opp_overlap 1639197 1639200 1639203, overlap 1639197 1639205 CAGGAAGTAGAATAA TAAGATTAATCCTCAAT GTATG ACTGAGGATTAATTTTA TTATTTAAATATACT TERM 1966 1639238 - 1639200 - f 91 -9.9 -3.90241 | opp_overlap 1639200 1639197 1639205, overlap 1639197 1639203 CAGGAAGTAGAATAA TAAGATTAATCCTCAAT GTATG ACTGAGGATTAATTTTA TTATTTAAATATACT TERM 1967 1639235 - 1639203 - f 72 -7.2 -4.06611 | opp_overlap 1639200 1639197 1639205, overlap 1639200 1639197 GAAGTAGAATAATAA GATTAATCCTCAAT GTATG ACTGAGGATTAATT TTATTATTTAAATAT TERM 1968 1639205 - 1639233 + F 89 -7.6 -5.011 | opp_overlap 1639203 1639200 1639197, overlap 1639200 1639197 AGTAGAATAATAAGA TTAATCCTCAAT GTATG ACTGAGGATTAA TTTTATTATTTAAAT CKL_1562 1639288 - 1640007 + | RNA pseudouridine synthase-related protein CKL_1563 1640004 - 1640168 + | hypothetical protein TERM 1969 1640946 - 1640968 + G 73 -8.4 -3.45134 | ACGGACAGCCTTTTA TCTCCTCTGG CAG CCAGGGCAGA TTATACCTTGATTGC TERM 1970 1641086 - 1641074 - g 70 -6.3 -4.26903 | opp_overlap 1641074 1641072 1641069 TGGATTGCAGGAAAA GGAAA AAA TTTCC TCTACTTTTTCGGAT CKL_1564 1640280 - 1641155 + | transcriptional regulator TERM 1971 1642212 - 1642202 - g 79 -6.8 -4.55689 | ACTATGCACATAAAA GGTC TTA GACC CATAGAAGAAGCCAT CKL_1565 1641179 - 1642417 + | hypothetical protein TERM 1972 1643097 - 1643081 - g 84 -10.9 -3.02677 | opp_overlap 1643083, overlap 1643083 AAAAGAGATTATATA GATTCCC ATA GGGAATC TTCACCCTTTATAAA cmk 1642550 - 1643215 + | cytidylate kinase TERM 1973 1644023 - 1643998 - g 70 -8.3 -3.17218 | overlap 1643996 1643994 AAAATTAAAACTATA GGTGTTACAGC AGGA GCTTCAACACC CAATTGGATAATAAA CKL_1567 1643227 - 1645140 + | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/S1 RNA-binding domain protein TERM 1974 1645241 - 1645218 - f 76 -8.4 -3.53733 | opp_overlap 1645217 1645216 1645218 1645220, overlap 1645216 GTTATTTTACAAATA TATTTACTTA AATT TAAGTAAATA CTATATTTTTATATG TERM 1975 1645218 - 1645241 + F 71 -8.4 -2.77484 | opp_overlap 1645218 1645216, overlap 1645217 1645216 1645220 GTTATTTTACAAATA TATTTACTTA AATT TAAGTAAATA CTATATTTTTATATG speH 1645401 - 1645781 + | S-adenosylmethionine decarboxylase proenzyme TERM 1976 1645779 - 1645809 + F 75 -7 -4.15854 | opp_overlap 1645779 1645781 1645782, overlap 1645782 AAAGCCTCAAATATA TAGGAGATCATC GCCGGAG GATGGTCTCTTA TTTTAAAGTCCATTT TERM 1977 1645782 - 1645806 + F 70 -6.5 -4.19746 | opp_overlap 1645781 1645782 1645779, overlap 1645779 GCCTCAAATATATAG GAGATCATC GCCGGAG GATGGTCTC TTATTTTAAAGTCCA CKL_1569 1645860 - 1646735 + | hypothetical protein TERM 1978 1646770 - 1646821 + T 100 -21.6 -3.07043 | opp_overlap 1646764 1646775 1646779, overlap 1646775 1646779 GTACGAAGATTTTCA TAAAATAAATAAGAGTTTACTTTG AGGT TAAAGTAAACTCTTATTTATTTTA TATTAAACTGCTAAG TERM 1979 1646816 - 1646775 - T 100 -16.4 -4.39828 | opp_overlap 1646770 1646775 1646779, overlap 1646779 AAGATTTTCATAAAA TAAATAAGAGTTTACTTT GAGGTT AAAGTAAACTCTTATTTA TTTTATATTAAACTG TERM 1980 1646775 - 1646816 + T 100 -17.1 -4.67608 | opp_overlap 1646775 1646779, overlap 1646770 1646779 AAGATTTTCATAAAA TAAATAAGAGTTTACTTTG AGGT TAAAGTAAACTCTTATTTA TTTTATATTAAACTG TERM 1981 1646812 - 1646779 - T 100 -12.8 -4.77173 | opp_overlap 1646775 1646770 1646779, overlap 1646775 TTTTCATAAAATAAA TAAGAGTTTACTTT GAGGTT AAAGTAAACTCTTA TTTATTTTATATTAA TERM 1982 1646779 - 1646812 + T 100 -13.5 -4.88163 | opp_overlap 1646779 1646775, overlap 1646775 1646770 TTTTCATAAAATAAA TAAGAGTTTACTTTG AGGT TAAAGTAAACTCTTA TTTATTTTATATTAA aspC3 1648047 - 1646851 - | aspartate aminotransferase TERM 1983 1647617 - 1647657 + g 74 -8.6 -3.29043 | gap 1, opp_overlap 1647611 1647653 AGGTGAAAGCCATCT TCAGCTTTTGTTAAAAATG GAAC CATTT-TGGCAGAAGCTGA TTCTGCAAAGCCATT CKL_1571 1648318 - 1649787 + | hypothetical protein CKL_1572 1650670 - 1650008 - | methyltransferase TERM 1984 1650999 - 1650980 - g 72 -7.2 -3.88029 | ATGGGATATAAAAGA GCAGAAAA TAAA CTTTCTGC GGACTTGATCATATT CKL_1573 1650866 - 1652200 + | hypothetical protein TERM 1985 1654694 - 1654684 - g 76 -5.4 -5.10765 | overlap 1654676 AAAGAAAGAAGAAAA GACT TCC AGTC AGGGAGAGCAGTTAA mutS 1652219 - 1654834 + | DNA mismatch repair protein TERM 1986 1655098 - 1655087 - g 72 -5.8 -4.44245 | AGAGGATGTAGAAAA GGCA TTTA TGCC TCATGCTACCAGTAA mutL 1654875 - 1656704 + | hypothetical protein miaA 1656718 - 1657647 + | tRNA delta(2)-isopentenylpyrophosphate transferase TERM 1987 1657682 - 1657659 - f 75 -8.4 -3.46106 | opp_overlap 1657658 1657663, overlap 1657657 TTAAAATGTTAAATA TTGATATAAT ATAT ATTATATCAA ACATTTTTTTCTAAA CKL_1577 1657774 - 1658022 + | RNA-binding protein TERM 1988 1658034 - 1658091 + F 100 -19.6 -2.7185 | opp_overlap 1658037 1658038 1658052, overlap 1658045 1658047 1658052 ATAAACTTATTTTAA AAATCTACACATAGAAAAGGAATAGG CAATTT CCTATTCCTTTTCTATGTGTAGGTAA TACTTAGGAGGTAAT TERM 1989 1658088 - 1658037 - f 100 -23.5 -4.63184 | opp_overlap 1658034 1658045 1658047 1658052, overlap 1658038 1658052 AACTTATTTTAAAAA TCTACACATAGAAAAGGAATAGG CAATTT CCTATTCCTTTTCTATGTGTAGG TAATACTTAGGAGGT TERM 1990 1658087 - 1658038 - f 100 -27 -3.37188 | opp_overlap 1658034 1658045 1658047 1658052, overlap 1658037 1658052 ACTTATTTTAAAAAT CTACACATAGAAAAGGAATAGG CAATTT CCTATTCCTTTTCTATGTGTAG GTAATACTTAGGAGG TERM 1991 1658045 - 1658080 + F 100 -16.5 -2.92642 | opp_overlap 1658038 1658037 1658052, overlap 1658034 1658047 1658052 TTAAAAATCTACACA TAGAAAAGGAATAGG CAATTT CCTATTCCTTTTCTA TGTGTAGGTAATACT TERM 1992 1658047 - 1658078 + F 100 -14.7 -3.01416 | opp_overlap 1658038 1658037 1658052, overlap 1658045 1658034 1658052 AAAAATCTACACATA GAAAAGGAATAGG CAATTT CCTATTCCTTTTC TATGTGTAGGTAATA TERM 1993 1658073 - 1658052 - f 90 -8.8 -4.64844 | opp_overlap 1658047 1658045 1658034 1658052, overlap 1658038 1658037 TCTACACATAGAAAA GGAATAGG CAATTT CCTATTCC TTTTCTATGTGTAGG TERM 1994 1658052 - 1658073 + F 90 -8.8 -4.64844 | opp_overlap 1658052 1658038 1658037, overlap 1658047 1658045 1658034 TCTACACATAGAAAA GGAATAGG CAATTT CCTATTCC TTTTCTATGTGTAGG CKL_1578 1658111 - 1659391 + | hypothetical protein lexA 1660032 - 1659424 - | LexA repressor TERM 1995 1659776 - 1659792 + g 82 -9.5 -3.69408 | opp_overlap 1659779 ATACCGGCGGTTATA GTACCTA TTA TAGGTAC TTCTATCATTTCTTT CKL_1580 1660215 - 1660601 + | hypothetical protein CKL_1581 1660680 - 1661015 + | hypothetical protein TERM 1996 1661140 - 1661117 - T 87 -8.2 -4.74787 | opp_overlap 1661116 1661117 ATAAATATAAATAAA GGCAATTGAT ACAA AACAATTGCC GATTTCTTATTTCTC CKL_1582 1662133 - 1661147 - | site-specific tyrosine recombinase XerC CKL_1583 1662428 - 1663336 + | hypothetical protein TERM 1997 1663875 - 1663864 - g 81 -4.4 -5.33026 | overlap 1663874 GAATGTAAACAAAAA GCTT TTAA AAGC ACTTCTCCAAAGGAA CKL_1584 1663333 - 1664430 + | hypothetical protein TERM 1998 1664599 - 1664582 - g 80 -6.3 -4.76423 | gap 1, overlap 1664583 GATAAAGACATAAAA GCC-GTAG GTA CTACAGGC AGTGGACGACATATT TERM 1999 1664899 - 1664873 - g 100 -12.4 -4.10429 | opp_overlap 1664873 1664875 1664882 AACTATGCTTTAAAA TCCAGCCATCCT GCC AGAATAGCTGGA AGGTGTGCTGTATTT CKL_1585 1664411 - 1665370 + | (R)-2-hydroxyglutaryl-CoA dehydratase activator-related protein TERM 2000 1665402 - 1665346 - f 100 -28.7 -4.20042 | opp_overlap 1665346 1665357, overlap 1665357 AGGAAGATGTGAAAA GTGGAATAAAATTATTTCAGCATAGAA AAT TTCTGTGCTGAAATAATTTTATTCCAC TTTACATAATATATT TERM 2001 1665346 - 1665402 + F 100 -30.9 -3.71265 | opp_overlap 1665346 1665357, overlap 1665357 AGGAAGATGTGAAAA GTGGAATAAAATTATTTCAGCATAGAA AAT TTCTGTGCTGAAATAATTTTATTCCAC TTTACATAATATATT TERM 2002 1665391 - 1665357 - f 100 -14.6 -4.70613 | opp_overlap 1665346 1665357, overlap 1665346 AAAAGTGGAATAAAA TTATTTCAGCATAGAA AAT TTCTGTGCTGAAATAA TTTTATTCCACTTTA TERM 2003 1665357 - 1665391 + F 100 -16.8 -4.6971 | opp_overlap 1665357 1665346, overlap 1665346 AAAAGTGGAATAAAA TTATTTCAGCATAGAA AAT TTCTGTGCTGAAATAA TTTTATTCCACTTTA CKL_1586 1665582 - 1666439 + | hypothetical protein TERM 2004 1666484 - 1666436 - T 100 -23.7 -2.61341 | opp_overlap 1666437 1666441 1666481, overlap 1666441 GAAAAAGTCAATTCA CTAAATCCAGGAGTATTTTAACA TTG TGTTAAAATACTCCTGGATTTAT ATTTTATAATAATTA TERM 2005 1666437 - 1666483 + T 100 -27.2 -3.85857 | opp_overlap 1666436 1666441, overlap 1666441 1666481 AAAAAGTCAATTCAC TAAATCCAGGAGTATTTTAACA TTG TGTTAAAATACTCCTGGATTTA TATTTTATAATAATT TERM 2006 1666441 - 1666479 + T 100 -23.6 -4.52142 | opp_overlap 1666436 1666441, overlap 1666437 AGTCAATTCACTAAA TCCAGGAGTATTTTAACA TTG TGTTAAAATACTCCTGGA TTTATATTTTATAAT TERM 2007 1666479 - 1666441 - T 100 -23.6 -3.79668 | opp_overlap 1666441 1666437, overlap 1666436 AGTCAATTCACTAAA TCCAGGAGTATTTTAACA TTG TGTTAAAATACTCCTGGA TTTATATTTTATAAT CKL_1587 1666722 - 1666501 - | hypothetical protein CKL_1588 1667350 - 1666802 - | hypothetical protein TERM 2008 1667025 - 1667014 - G 81 -4.4 -5.49234 | overlap 1667003 ATATGGAACAAAAAA TTCC TAGA GGAA CCCATAAAGTTAAAA TERM 2009 1667466 - 1667522 + r 74 -2.8 -5.56112 | gap 1, opp_overlap 1667480, overlap 1667480 TAATATTTAATATGT TAAT-AAAATAAAAATCCATAATCAAA CCAA TTTAACTATGGATTTTTATTTGCGTTA TTTTTTAATTTTTAT TERM 2010 1667507 - 1667480 - R 100 -7.2 -5.62288 | opp_overlap 1667466 1667480 TTAATAAAATAAAAA TCCATAATCAAA CCAA TTTAACTATGGA TTTTTATTTGCGTTA CKL_1589 1667733 - 1667527 - | hypothetical protein CKL_1590 1668112 - 1667759 - | stage V sporulation protein AE CKL_1591 1669135 - 1668134 - | stage V sporulation protein AD TERM 2011 1668532 - 1668516 - G 74 -9.4 -2.64735 | opp_overlap 1668511 1668509 ATGGTATCTACAGCA GCTGCC GCCAT GGCAGC TCCCATATTAAATGG CKL_1592 1669615 - 1669136 - | stage V sporulation protein AC CKL_1593 1670487 - 1669627 - | hypothetical protein CKL_1594 1670712 - 1670506 - | hypothetical protein TERM 2012 1670876 - 1670848 - R 100 -11.9 -4.84017 | opp_overlap 1670850 AATTTTCTACAAAAA TAGACTGATGCAA ACT TCGCATCAATCTA CCTTAAATTAATTAA CKL_1595 1671837 - 1670917 - | hypothetical protein TERM 2013 1671080 - 1671069 - G 70 -4.4 -4.83615 | GAGTTGGGATAAAAA CAGT TCTA ACTG CATATTTATCTTTTA TERM 2014 1671390 - 1671400 + g 70 -4 -5.11613 | CAAATTTCATAGGGT CTAT TCC ATAG TTTTTTAAATCATCT CKL_1596 1671957 - 1672364 + | hypothetical protein TERM 2015 1672416 - 1672379 - T 90 -11 -3.52668 | AATTGATCCATATAA TTTATAGAAGAAAAAC ACTAAA ATTTTTCTTCTATAAA TGCAAGTGCTGCGGC CKL_1597 1673349 - 1672396 - | transcriptional regulator malL 1675028 - 1673331 - | MalL TERM 2016 1673920 - 1673932 + g 70 -6.3 -4.33819 | TCCTCTAGCTTTATA TTGGT CAT ACCAA TTTCTTGTCCCTGAT TERM 2017 1675227 - 1675189 - R 75 -7.7 -3.9461 | gap 1, opp_overlap 1675190 1675193, overlap 1675190 1675193 TGTCCTCAATAACAA TTAAGCCGATAAGAT-AT GCAT ATAATCTCATCGGCTTAT ACTTATAAATTGCCT TERM 2018 1675226 - 1675190 - R 91 -11.2 -2.96444 | gap 1, opp_overlap 1675190 1675193, overlap 1675189 1675193 GTCCTCAATAACAAT TAAGCCGATAAGAT-AT GCAT ATAATCTCATCGGCTTA TACTTATAAATTGCC TERM 2019 1675190 - 1675226 + r 74 -9 -2.86539 | gap 1, opp_overlap 1675190 1675189 1675193, overlap 1675193 GTCCTCAATAACAAT TAAGCCGATAAGAT-AT GCAT ATAATCTCATCGGCTTA TACTTATAAATTGCC TERM 2020 1675223 - 1675193 - R 76 -8.5 -3.62255 | gap 1, opp_overlap 1675190 1675193, overlap 1675190 1675189 CTCAATAACAATTAA GCCGATAAGAT-AT GCAT ATAATCTCATCGGC TTATACTTATAAATT TERM 2021 1675268 - 1675254 - R 70 -5.8 -4.40561 | overlap 1675264 1675267 GCCTTTTAAAAATAA CATTAT TAT ATAATG ACATTGAATTTCATT CKL_1599 1675550 - 1675329 - | FeoA-related protein CKL_1600 1675824 - 1675630 - | hypothetical protein TERM 2022 1675906 - 1675956 + r 100 -21 -3.09518 | opp_overlap 1675920, overlap 1675920 GAATATATTACAGTT TTAAAATATAAAAACAGCTGGACA GAT TCTCCAGCTGTTTTTATATTTTAG TGTTAACGATTTTCA TERM 2023 1675920 - 1675942 + r 100 -10.6 -5.30339 | opp_overlap 1675920, overlap 1675906 TTTAAAATATAAAAA CAGCTGGACA GAT TCTCCAGCTG TTTTTATATTTTAGT TERM 2024 1675942 - 1675920 - R 100 -10.6 -5.28983 | opp_overlap 1675920 1675906 TTTAAAATATAAAAA CAGCTGGACA GAT TCTCCAGCTG TTTTTATATTTTAGT feoB2 1678242 - 1676095 - | hypothetical protein CKL_1602 1678525 - 1678304 - | FeoA-related protein CKL_1603 1678767 - 1678555 - | FeoA-related protein TERM 2025 1679063 - 1679028 - R 78 -2.6 -5.75342 | overlap 1679033 TTTTTGCAAAAAAAA TAAAATCAGGACTTAA TTCG TCAAGTCCTGATGGAA CTTCCTATATTTTTA TERM 2026 1679058 - 1679033 - R 100 -11.3 -5.66926 | overlap 1679028 GCAAAAAAAATAAAA TCAGGACTTAA TTCG TCAAGTCCTGA TGGAACTTCCTATAT infC 1679600 - 1679088 - | hypothetical protein nhaC 1681101 - 1679716 - | hypothetical protein CKL_1606 1682612 - 1681248 - | transporter protein TERM 2027 1683296 - 1683273 - g 74 -3.2 -5.33866 | gap 1, overlap 1683287 GAAATGTACAAAAAA TTCTGTGATGA AAG TCTTC-CAGAA GAAATTCATGCCCTA CKL_1607 1682793 - 1683473 + | transcriptional regulator TERM 2028 1683493 - 1683540 + T 100 -20.2 -3.56854 | opp_overlap 1683493 ATATTTCCGTTAAAA CTATAGACTAAGGCACCAAACC TTTA GATTTAGTGCCTTAGTCTATAG TTCTCTCAATATTTT TERM 2029 1683540 - 1683493 - T 100 -24.6 -4.08394 | opp_overlap 1683493 ATATTTCCGTTAAAA CTATAGACTAAGGCACCAAACC TTTA GATTTAGTGCCTTAGTCTATAG TTCTCTCAATATTTT punA 1684353 - 1683535 - | PunA metA1 1685322 - 1684393 - | homoserine O-succinyltransferase TERM 2030 1685400 - 1685439 + H 81 -8 -4.28115 | opp_overlap 1685393 1685405, overlap 1685395 1685405 AACTAAAATTTTACA AAAAAGCCGCACTATAAT AACG ATTATAGTACGGCTTTAA TTTACTTTCTTTGGT TERM 2031 1685405 - 1685434 + H 100 -12.3 -4.18782 | opp_overlap 1685405, overlap 1685400 1685395 AAATTTTACAAAAAA GCCGCACTATAAT AACG ATTATAGTACGGC TTTAATTTACTTTCT TERM 2032 1685434 - 1685405 - H 100 -14.5 -5.28826 | opp_overlap 1685405 1685400 1685395 AAATTTTACAAAAAA GCCGCACTATAAT AACG ATTATAGTACGGC TTTAATTTACTTTCT CKL_1610 1685479 - 1685691 + | hypothetical protein CKL_1611 1686240 - 1686767 + | sigma factor CKL_1612 1686787 - 1687035 + | hypothetical protein CKL_1613 1687041 - 1688210 + | hypothetical protein TERM 2033 1688249 - 1688232 - f 100 -8.5 -5.44119 | opp_overlap 1688232 TTTACTTTAAAAAAA GTTGTAG TCCT CTACAAC TTTTTTGCATGGGAG TERM 2034 1688232 - 1688249 + F 95 -8.5 -5.08824 | opp_overlap 1688232 TTTACTTTAAAAAAA GTTGTAG TCCT CTACAAC TTTTTTGCATGGGAG TERM 2035 1689831 - 1689821 - g 70 -4 -4.93898 | ATAGTATTACAAAAA TTCT TGG AGAA ATGGGAGTAGGCTAT aad 1688323 - 1690953 + | bifunctional acetaldehyde-CoA/alcohol dehydrogenase TERM 2036 1690986 - 1691027 + F 100 -16.3 -2.52896 | opp_overlap 1690988 1690996, overlap 1690996 AATTTTACCCCATTC AATCTGAACACAAAAATTT CATA AAATTTTTGTGTTCAGATA TAAATTCAAAAATAA TERM 2037 1691025 - 1690988 - f 100 -18.9 -3.06796 | opp_overlap 1690986 1690996, overlap 1690996 TTTTACCCCATTCAA TCTGAACACAAAAATTT CATA AAATTTTTGTGTTCAGA TATAAATTCAAAAAT TERM 2038 1691105 - 1691056 - f 100 -16.3 -3.96827 | opp_overlap 1691060 1691069, overlap 1691057 1691069 AAAATCATTGACAAA TTCCTATTACAAATGTAATATAT TATT ATATATTACATTTGTAATAGAAG GAGGCTAAATAATGA TERM 2039 1691104 - 1691057 - f 100 -19.8 -2.97012 | opp_overlap 1691060 1691069, overlap 1691056 1691069 AAATCATTGACAAAT TCCTATTACAAATGTAATATAT TATT ATATATTACATTTGTAATAGAA GGAGGCTAAATAATG TERM 2040 1691069 - 1691092 + F 80 -8.4 -3.96148 | opp_overlap 1691069 1691057 1691056, overlap 1691060 AATTCCTATTACAAA TGTAATATAT TATT ATATATTACA TTTGTAATAGAAGGA TERM 2041 1691092 - 1691069 - f 80 -8.4 -3.96892 | opp_overlap 1691060 1691069, overlap 1691057 1691056 AATTCCTATTACAAA TGTAATATAT TATT ATATATTACA TTTGTAATAGAAGGA CKL_1615 1691117 - 1691497 + | transcriptional regulator TERM 2042 1693072 - 1693062 - g 79 -6.8 -4.61852 | AATATTATAAATAAA CCAG CGT CTGG AGTGCAGAGTCCTAT CKL_1616 1691511 - 1693118 + | regulatory protein TERM 2043 1693152 - 1693120 - T 78 -8 -3.92869 | gap 1, opp_overlap 1693127, overlap 1693127 TTAGTGAGTTATAAA CTAAAAAGAGAAGCA TTTT TACTTCTCTTTTT-G ATTCAATTTATGAAT TERM 2044 1693146 - 1693127 - T 86 -7.2 -5.04601 | opp_overlap 1693127, overlap 1693120 GTTATAAACTAAAAA GAGAAGCA TTTT TACTTCTC TTTTTGATTCAATTT TERM 2045 1693127 - 1693146 + T 72 -5 -4.90917 | opp_overlap 1693127 1693120 GTTATAAACTAAAAA GAGAAGCA TTTT TACTTCTC TTTTTGATTCAATTT ilvH 1693670 - 1693173 - | hypothetical protein ilvI 1695287 - 1693677 - | IlvI TERM 2046 1695351 - 1695370 + r 70 -5 -4.65895 | GTAGTGAACATTATG GCAGATTG TAGT CAATATGC TTTTTAAGTACAAAA TERM 2047 1695416 - 1695389 - R 79 -3.5 -5.71983 | gap 1, opp_overlap 1695396 TTAAGTACAAAAAAA CAGACCTCTTCA TGGGG CG-AGAAGTCTG TCCGCGGTACCACCC TERM 2048 1696027 - 1695978 - R 76 -6.7 -4.5442 | overlap 1695980 TCGTTAAGGAGAAAA CAGCAAACTCACTCCATATAG TATTTAAC CTACATAAAGTAAGTTTGCTT GAAATAGCCGCATAA TERM 2049 1696025 - 1695980 - R 86 -9.3 -3.8823 | overlap 1695978 GTTAAGGAGAAAACA GCAAACTCACTCCATATAG TATTTAAC CTACATAAAGTAAGTTTGC TTGAAATAGCCGCAT gltD 1697549 - 1696116 - | hypothetical protein TERM 2050 1697567 - 1697589 + r 100 -11.4 -5.29445 | opp_overlap 1697557 1697567 1697570 1697573 TATACCTCCTACATA TTAGAAGCAG CAG CTGCTTCTGA TTTTTGTTGTTCAAG TERM 2051 1697589 - 1697567 - R 74 -9.2 -2.88249 | opp_overlap 1697567, overlap 1697557 1697570 1697573 TATACCTCCTACATA TTAGAAGCAG CAG CTGCTTCTGA TTTTTGTTGTTCAAG TERM 2052 1697586 - 1697570 - R 84 -10.9 -2.6927 | opp_overlap 1697567, overlap 1697557 1697567 1697573 ACCTCCTACATATTA GAAGCAG CAG CTGCTTC TGATTTTTGTTGTTC gltB 1702089 - 1697560 - | hypothetical protein TERM 2053 1699490 - 1699503 + g 71 -3.1 -5.22039 | overlap 1699482 TCAACTTCTTCTATT GGAAG TTCT TTTCC TTTTTTAAGTTTAAA TERM 2054 1702153 - 1702127 - H 77 -5.3 -5.06816 | ACTTTTGAATAAAAA TGCATTTCT CTAAGCCCC AGAAATGCA CCTCAAACCTATTCT TERM 2055 1702530 - 1702546 + H 78 -4.3 -5.4251 | opp_overlap 1702530 ATCTGTATTGATATA CCGCCAT TAA AAGGTGG TTTTTTATATATAAA CKL_1621 1702579 - 1703076 + | hypothetical protein CKL_1622 1703173 - 1703751 + | nucleotide-binding protein TERM 2056 1703772 - 1703798 + T 90 -9.6 -4.58076 | opp_overlap 1703772, overlap 1703796 AATGAATGCAAAAAA TTAAGCCTACTT AAT AAATAGGCTTAA TTTTATCTAAATTAT TERM 2057 1703798 - 1703772 - T 100 -11.8 -5.1848 | opp_overlap 1703772 1703796 AATGAATGCAAAAAA TTAAGCCTACTT AAT AAATAGGCTTAA TTTTATCTAAATTAT panD 1704196 - 1703813 - | aspartate alpha-decarboxylase CKL_1624 1704467 - 1705258 + | hypothetical protein ndk 1705692 - 1705285 - | hypothetical protein TERM 2058 1705786 - 1705734 - R 100 -11.7 -4.31412 | opp_overlap 1705734 1705783 AAATATTCATTAAAA TCCATCACATTAAATACCTTATCAT CTT ACAATAAGTTATATAATATGATGGA TTCTATCTATAACTT CKL_1626 1706070 - 1705825 - | hypothetical protein CKL_1627 1706613 - 1706221 - | hypothetical protein TERM 2059 1706473 - 1706485 + g 75 -4.9 -5.02074 | TTCATTCTCATTAAC TTCTA CAG TAGAA TTTTTTACAGAATAC TERM 2060 1706645 - 1706693 + r 70 -2.2 -5.42164 | gap 1, overlap 1706641 TATTTTTGTTTTAAT TAAATTATATAATCTTTTTTTCA ATAT TGGAATAAA-ATAATATAATTTA TTTTTCTTATTTATA TERM 2061 1706758 - 1706746 - R 72 -3.5 -5.27779 | CTTAAGATCAAAAAA TAAAA CTT TTTTA CATAATTACTGTTCT CKL_1628 1707252 - 1706764 - | hypothetical protein TERM 2062 1707834 - 1707790 - H 80 -5.4 -5.32882 | gap 1, opp_overlap 1707799, overlap 1707792 1707793 CACTAGTACAAAAAA GATGTTTAATTATATTACTGA CTAG TCAGTAATATAATTAATC-TG AAGACTGGAATTAAC TERM 2063 1707833 - 1707792 - H 91 -10.5 -4.29153 | opp_overlap 1707799, overlap 1707790 1707793 CTAGTACAAAAAAGA TGTTTAATTATATTACTGA CTAG TCAGTAATATAATTAATCT GAAGACTGGAATTAA TERM 2064 1707832 - 1707793 - H 100 -14 -3.16407 | opp_overlap 1707799, overlap 1707792 1707790 TAGTACAAAAAAGAT GTTTAATTATATTACTGA CTAG TCAGTAATATAATTAATC TGAAGACTGGAATTA TERM 2065 1707799 - 1707826 + H 93 -11.6 -3.2614 | opp_overlap 1707793 1707792 1707790 AAAAAAGATGTTTAA TTATATTACTGA CTAG TCAGTAATATAA TTAATCTGAAGACTG TERM 2066 1709547 - 1709534 - g 70 -8.1 -3.16154 | TAAGAGTAGATGTAA CCCCT TTTA AGGGG AGTGGTAATCTTACT CKL_1629 1707895 - 1710063 + | phage infection protein TERM 2067 1711154 - 1711139 - g 84 -6.2 -5.27399 | overlap 1711131 TAATACACTAAAAAA TTCAGT ACAA ACTGAA AAAACATATTTAAAT CKL_1630 1710084 - 1712249 + | phage infection protein TERM 2068 1712458 - 1712492 + F 100 -16.2 -4.46112 | opp_overlap 1712463, overlap 1712451 1712463 TAAATTAGTTTATTA TAAAAGTTATTTTTCT TAC AGAAAAATAACTTTTA TTTATTTAACTCCAA TERM 2069 1712487 - 1712463 - f 100 -11.7 -4.46926 | opp_overlap 1712458 1712463 TAGTTTATTATAAAA GTTATTTTTCT TAC AGAAAAATAAC TTTTATTTATTTAAC TERM 2070 1712463 - 1712487 + F 100 -11.7 -5.18866 | opp_overlap 1712463, overlap 1712458 TAGTTTATTATAAAA GTTATTTTTCT TAC AGAAAAATAAC TTTTATTTATTTAAC TERM 2071 1712828 - 1712814 - g 79 -5 -5.1925 | opp_overlap 1712814 1712827 TCATAATTCAAAAAA TACTCC TGC AGAGTA TTTAATTAAATATTA metA2 1712578 - 1713492 + | MetA2 TERM 2072 1713503 - 1713560 + T 100 -16.4 -3.60419 | gap 2, opp_overlap 1713509 1713513, overlap 1713513 TCTAATAATATCTCA TTATAATAAATAGGAGCAAGATTTATAT AAAA AT-TAAATCT-GCTCCTATTTATTATAA TTATCATTTACCAAT TERM 2073 1713554 - 1713509 - T 90 -11 -3.42346 | gap 2, opp_overlap 1713503 1713513, overlap 1713513 AATATCTCATTATAA TAAATAGGAGCAAGATTTATAT AAAA AT-TAAATCT-GCTCCTATTTA TTATAATTATCATTT TERM 2074 1713550 - 1713513 - T 76 -7.4 -4.35483 | gap 2, opp_overlap 1713503 1713513, overlap 1713509 TCTCATTATAATAAA TAGGAGCAAGATTTATAT AAAA AT-TAAATCT-GCTCCTA TTTATTATAATTATC TERM 2075 1713513 - 1713550 + T 76 -7.4 -4.41137 | gap 2, opp_overlap 1713513 1713509, overlap 1713503 TCTCATTATAATAAA TAGGAGCAAGATTTATAT AAAA AT-TAAATCT-GCTCCTA TTTATTATAATTATC metB2 1714756 - 1713575 - | MetB2 TERM 2076 1714787 - 1714821 + r 70 -8.8 -2.5293 | overlap 1714786 CCAATATTTTATGGA TGCATAATGCTG CCCGATATCCT CAGCATTATGCA ATATTAATAATTATT metK1 1716067 - 1714856 - | MetK1 TERM 2077 1716192 - 1716169 - H 100 -9 -5.79595 | gap 1, opp_overlap 1716169 CGTTAAAATAAAAAA CTTCCTTGAAG AAA CTTCA-GGAAG TTTTTATCCTAATCG TERM 2078 1716169 - 1716192 + H 95 -9 -4.93296 | gap 1, opp_overlap 1716169 CGTTAAAATAAAAAA CTTCCTTGAAG AAA CTTCA-GGAAG TTTTTATCCTAATCG TERM 2079 1717231 - 1717215 - g 75 -8 -3.6707 | overlap 1717208 1717206 1717226 AGGGAATACCGGAAA TACCGG AAACA CCGGTA ATACAGGAAATACTG CKL_1634 1716928 - 1717692 + | hypothetical protein TERM 2080 1717772 - 1717730 - T 100 -13.9 -3.09452 | gap 1, opp_overlap 1717735 1717738, overlap 1717735 1717738 ATTTTTTAATATATA TCAC-ATAAGATCGCTAAAT CACA ATTTAGCGATCTTATTGTAA TTTATAACAATTTTA TERM 2081 1717735 - 1717766 + T 100 -16.2 -3.64915 | opp_overlap 1717735 1717730 1717738, overlap 1717738 TTAATATATATCACA TAAGATCGCTAAAT CACA ATTTAGCGATCTTA TTGTAATTTATAACA TERM 2082 1717766 - 1717735 - T 100 -16.2 -2.92255 | opp_overlap 1717735 1717738, overlap 1717730 1717738 TTAATATATATCACA TAAGATCGCTAAAT CACA ATTTAGCGATCTTA TTGTAATTTATAACA TERM 2083 1717763 - 1717738 - T 100 -13.5 -3.5951 | opp_overlap 1717735 1717738, overlap 1717735 1717730 ATATATATCACATAA GATCGCTAAAT CACA ATTTAGCGATC TTATTGTAATTTATA TERM 2084 1717738 - 1717763 + T 100 -13.5 -3.94823 | opp_overlap 1717738 1717735 1717730, overlap 1717735 ATATATATCACATAA GATCGCTAAAT CACA ATTTAGCGATC TTATTGTAATTTATA TERM 2085 1717838 - 1717872 + T 76 -7.4 -4.36914 | opp_overlap 1717838 1717837 1717840 1717851 GAATTTTTCCAAAAG CATATATTTAAAAGCT GCC ATCATTTAAATATATG TTTTATGACGACAGC thiE1 1718642 - 1718040 - | ThiE1 TERM 2086 1718435 - 1718419 - G 85 -8.1 -4.35524 | opp_overlap 1718419 GTGTGAAATCCAAAA GCTTTAA TAT TTAAAGC TATATCAATATTGCC TERM 2087 1718662 - 1718688 + r 71 -7.4 -3.72037 | opp_overlap 1718666 1718668, overlap 1718665 1718668 TTGGTTCCCAATCTT TAAATATGGGAT TAT ATCCCATGCTTA TTATATCATTTTTAA thiH 1719745 - 1718639 - | thiamine biosynthesis protein ThiH TERM 2088 1718668 - 1718682 + g 72 -8.6 -3.01644 | opp_overlap 1718668 1718666, overlap 1718665 1718662 CCCAATCTTTAAATA TGGGAT TAT ATCCCA TGCTTATTATATCAT TERM 2089 1718682 - 1718668 - G 76 -8.6 -3.38314 | opp_overlap 1718665 1718662 1718668, overlap 1718666 CCCAATCTTTAAATA TGGGAT TAT ATCCCA TGCTTATTATATCAT thiG 1720521 - 1719757 - | thiazole synthase thiF 1721377 - 1720577 - | thiamine biosynthesis protein ThiF TERM 2090 1720696 - 1720708 + g 85 -4.9 -5.57888 | opp_overlap 1720696 CACCATCACCAACCA GATAA AAA TTATC TTTTATTTTTTTAGT thiS 1721579 - 1721379 - | hypothetical protein TERM 2091 1721670 - 1721653 - R 100 -7.7 -5.63517 | TGCTTAAACAAAAAA GGAAGCA TTAT TGCTCCC TCATAACTTTCAAAT TERM 2092 1721790 - 1721766 - R 100 -10.2 -4.85195 | overlap 1721784 AAAATAATTCAAAAA TCACAAATTC ATAAG GAATTTGTGA TAACAAACCGTATTT CKL_1640 1723569 - 1722598 - | hypothetical protein CKL_1641 1723900 - 1723574 - | transcriptional regulator TERM 2093 1723916 - 1723973 + r 100 -17.5 -5.22039 | overlap 1723917 AGAATTCACCTCATT TTACTTTATCTGTCGTAGTAATTTTAT TATA ACACAATTACTACGACAGATAAAGTAC TTTTTTAGATTTAAA TERM 2094 1723917 - 1723972 + r 100 -21 -3.72139 | overlap 1723916 GAATTCACCTCATTT TACTTTATCTGTCGTAGTAATTTTAT TATA ACACAATTACTACGACAGATAAAGTA CTTTTTTAGATTTAA TERM 2095 1724228 - 1724214 - R 76 -4.2 -5.47821 | opp_overlap 1724214 1724224 ACCTATTTAAAAAAA CAACCT CAA AGGTAG TTCCTTTACCTATTT CKL_1642 1725441 - 1724191 - | two component sensor kinase TERM 2096 1724985 - 1724998 + g 74 -3.9 -5.14563 | opp_overlap 1724985 TACCTACATCAAAAT TGTAA TCTA TTACA TTTTTTGCTGCAAAC CKL_1643 1726143 - 1725448 - | transcriptional regulator TERM 2097 1725510 - 1725528 + g 77 -8.2 -3.87562 | TAGTTTTTATGTACT CAGGATTT GAA GAATCCTG TTCTATCTTTTCTCT TERM 2098 1725819 - 1725845 + g 70 -7.4 -3.56987 | opp_overlap 1725819 1725824, overlap 1725824 CTTTAATCCTAGATA CAAATTCCTTTA CCC TAAAGGGTTTTG TTATATAATCGTCTG TERM 2099 1725824 - 1725840 + g 78 -5.9 -4.85918 | opp_overlap 1725824 1725819, overlap 1725819 ATCCTAGATACAAAT TCCTTTA CCC TAAAGGG TTTTGTTATATAATC CKL_1644 1728751 - 1726211 - | permease TERM 2100 1727278 - 1727266 - G 82 -4.9 -5.40464 | CATCAGAAATAAAAA TATTC GAT GAATA GGTTCCATAAGATAT CKL_1645 1729450 - 1728776 - | ABC transporter ATPase TERM 2101 1729625 - 1729666 + H 100 -16.1 -4.77986 | opp_overlap 1729631 1729636, overlap 1729627 TGTTGAATTTACTTT AATTTATGAAAGCTCCGGG AATT CCCAGAGCTTTCATAAATA TTTTTACATATTTAG TERM 2102 1729627 - 1729664 + H 100 -18.7 -3.9951 | opp_overlap 1729631 1729636, overlap 1729625 TTGAATTTACTTTAA TTTATGAAAGCTCCGGG AATT CCCAGAGCTTTCATAAA TATTTTTACATATTT TERM 2103 1729660 - 1729631 - H 100 -17.3 -2.53995 | opp_overlap 1729627 1729625, overlap 1729636 ATTTACTTTAATTTA TGAAAGCTCCGGG AATT CCCAGAGCTTTCA TAAATATTTTTACAT TERM 2104 1729655 - 1729636 - H 93 -11.4 -3.794 | opp_overlap 1729627 1729625, overlap 1729631 CTTTAATTTATGAAA GCTCCGGG AATT CCCAGAGC TTTCATAAATATTTT CKL_1646 1729849 - 1730472 + | transcriptional regulator CKL_1647 1730888 - 1730505 - | hypothetical protein CKL_1648 1731964 - 1730885 - | hypothetical protein CKL_1649 1732948 - 1732253 - | hypothetical protein CKL_1650 1734484 - 1733012 - | transporter protein TERM 2105 1733887 - 1733859 - G 71 -8.3 -3.3663 | opp_overlap 1733859, overlap 1733846 1733857 1733855 1733864 AGTACTATAAATACA GTAAATAGAAGAG AGC CTTTTCTATCTAC TTTTTCCTCAACTAC TERM 2106 1733859 - 1733887 + g 85 -8.3 -4.7373 | opp_overlap 1733846 1733859 1733857 1733855 1733864 AGTACTATAAATACA GTAAATAGAAGAG AGC CTTTTCTATCTAC TTTTTCCTCAACTAC CKL_1651 1734942 - 1734481 - | transcriptional regulator TERM 2107 1735519 - 1735542 + G 70 -8.2 -3.08032 | opp_overlap 1735516 1735520, overlap 1735516 TCAAGGTATAAAGGA ATGCTGCAAA ATAT TTTGCAGCAA TAATTTTAAAAAAGC TERM 2108 1735541 - 1735520 - g 95 -11.7 -3.63059 | opp_overlap 1735519 1735516, overlap 1735516 CAAGGTATAAAGGAA TGCTGCAAA ATAT TTTGCAGCA ATAATTTTAAAAAAG TERM 2109 1736009 - 1735999 - g 74 -3.2 -5.33866 | TAAAGCTATAAAAAA GTCC ATA GAAC TGCATAAGGAAAAAA CKL_1652 1735088 - 1736173 + | UvrABC-related protein, protein C CKL_1653 1736638 - 1736450 - | transcriptional regulator TERM 2110 1737279 - 1737296 + r 74 -8.5 -3.27653 | opp_overlap 1737279, overlap 1737277 TACATCTACAGTAAA TCCAGTA AAAA TACTGGA TATTATACTGCCACT TERM 2111 1737296 - 1737279 - R 78 -8.5 -3.85539 | opp_overlap 1737277 1737279 TACATCTACAGTAAA TCCAGTA AAAA TACTGGA TATTATACTGCCACT CKL_1654 1739899 - 1737581 - | phosphoenolpyruvate synthase-related protein CKL_1655 1740429 - 1739944 - | hypothetical protein TERM 2112 1740598 - 1740654 + r 100 -16.9 -3.26712 | opp_overlap 1740600, overlap 1740598 1740600 TAAATGAATTAATCA AATTGACCACAGTAGTCAATAATGAAA TTA TATCACCATTGACTACTGTGGTCAATA TCTGTTATTCCCAGT TERM 2113 1740598 - 1740656 + r 82 -9.3 -3.409 | gap 2, opp_overlap 1740600, overlap 1740598 1740600 TAAATGAATTAATCA -A-ATTGACCACAGTAGTCAATAATGAAA TTA TATCACCATTGACTACTGTGGTCAATATC TGTTATTCCCAGTTT TERM 2114 1740600 - 1740652 + r 100 -19.5 -3.19509 | opp_overlap 1740600, overlap 1740598 1740598 AATGAATTAATCAAA TTGACCACAGTAGTCAATAATGAAA TTA TATCACCATTGACTACTGTGGTCAA TATCTGTTATTCCCA TERM 2115 1740652 - 1740600 - R 100 -23.9 -4.02021 | opp_overlap 1740600 1740598 1740598 AATGAATTAATCAAA TTGACCACAGTAGTCAATAATGAAA TTA TATCACCATTGACTACTGTGGTCAA TATCTGTTATTCCCA CKL_1656 1740997 - 1740659 - | transcriptional regulator CKL_1657 1742334 - 1741012 - | ABC transporter permease CKL_1658 1743666 - 1742347 - | ABC transporter permease CKL_1659 1745009 - 1743825 - | transposase CKL_1660 1745096 - 1745254 + | hypothetical protein CKL_1661 1745977 - 1745300 - | ABC transporter ATPase TERM 2116 1745551 - 1745567 + g 77 -2.9 -5.53436 | opp_overlap 1745554, overlap 1745539 1745554 GACGCTGTCCTCCCG AAAGCTC TGT GGGCTTA TTTTTTATCTTATCT TERM 2117 1745554 - 1745564 + g 70 -4.6 -4.80737 | opp_overlap 1745554, overlap 1745539 1745551 GCTGTCCTCCCGAAA GCTC TGT GGGC TTATTTTTTATCTTA TERM 2118 1746063 - 1746006 - R 88 -10.4 -3.41292 | gap 2, opp_overlap 1746011, overlap 1746017 ATTTTCAAGATAATA CTATTCAGATATTCTTCTAGTGTACTAT AGTT ATAATACACTAGAAGAATATCCGT-T-G TCAATATAGCTTTAT TERM 2119 1746011 - 1746060 + r 100 -18.3 -3.40071 | opp_overlap 1746006 1746017 CAAGATAATACTATT CAGATATTCTTCTAGTGTACTAT AGTT ATAATACACTAGAAGAATATCCG TTGTCAATATAGCTT TERM 2120 1746054 - 1746017 - R 100 -16.7 -2.93207 | opp_overlap 1746011, overlap 1746006 AATACTATTCAGATA TTCTTCTAGTGTACTAT AGTT ATAATACACTAGAAGAA TATCCGTTGTCAATA TERM 2121 1746126 - 1746101 - R 95 -11.9 -3.71794 | opp_overlap 1746098 1746097 ATGTAATTAGCCAAA TCCCCCATCTT TTTC AAGGTGGGGGA TACATATCTTATTCT CKL_1662 1747453 - 1746392 - | hypothetical protein TERM 2122 1746692 - 1746678 - G 79 -5 -5.30616 | TCATCTAAATAAAAA TCTTCC TTT GAAAGA TCAAATACATAACCT CKL_1663 1748732 - 1747455 - | hypothetical protein TERM 2123 1748474 - 1748487 + g 85 -8.1 -4.55295 | CTGGAAGACTTTCTG CCCTG ACTA CAGGG TTTATTTCTCCAAGC TERM 2124 1748657 - 1748635 - G 84 -5.6 -5.45802 | opp_overlap 1748635 TTTTTAAAACAAAAA GGACATTTTA TCA TAAAAGGCCC CTTTTCATAAGTTGC TERM 2125 1748695 - 1748716 + g 85 -8.9 -4.07568 | TAATACTTATTTTGT TTTTTTCTG CTTT CAGAAAAAA TTTTCAGAAAACCCA CKL_1664 1749430 - 1748783 - | hypothetical protein CKL_1665 1751787 - 1749460 - | hypothetical protein TERM 2126 1750136 - 1750153 + g 76 -3.4 -5.39221 | overlap 1750137 TAGCTTTTAATCGTC TCTCCT ATGTAC AGGAGG TTTTTTGCTTCTTCT TERM 2127 1750681 - 1750699 + g 81 -10.4 -2.97171 | overlap 1750678 1750683 1750685 CATCATAATGCCCTT CATATCCA TTA TGGATATG TGCTTTGGTAAAATA CKL_1666 1755249 - 1751839 - | hypothetical protein TERM 2128 1755010 - 1755034 + g 74 -7.3 -4.11061 | opp_overlap 1755010 CTGGTTGGTTTCAAA GCCTAAAAA TTCTACC TTTTTAGGC TTATCTTTTCTTGTA CKL_1667 1757028 - 1755286 - | hypothetical protein TERM 2129 1756432 - 1756446 + g 71 -8.6 -2.87344 | TATGTAGTCTTTACC TCCAGT TGA ACTGGA TATGTCACCAAGCTG CKL_1668 1758482 - 1757031 - | hypothetical protein TERM 2130 1757562 - 1757546 - G 91 -8.1 -5.02287 | CATAAAAATATAAAA GTTTTTC ATT GAAAAAC CTAGATGAATTTATA CKL_1669 1761188 - 1758528 - | hypothetical protein TERM 2131 1760215 - 1760225 + g 70 -4 -5.09762 | GCTTTTTTAATGTTT TCAA TAC TTGA TTTTTCTATTCCCCT TERM 2132 1760372 - 1760403 + g 90 -12.6 -3.25072 | gap 1, opp_overlap 1760380 1760381, overlap 1760380 CTACTTCAGCCAGTT TTATGAAACT-GCTG CTG CAGCTAGTTTCATAA TTAAGTTCTCCTGAA TERM 2133 1760945 - 1760960 + g 74 -5.4 -4.76802 | overlap 1760947 TGCCTATATACTTAC TGCTGC ATAT GCAGTA TTTATTATTTTTCAG CKL_1670 1762376 - 1761198 - | hypothetical protein TERM 2134 1761551 - 1761562 + g 70 -4.4 -4.89393 | CCACAGGTATGTCTA TGAG TTTA CTCA TTTTTATACCATTTG CKL_1671 1763417 - 1762413 - | hypothetical protein CKL_1672 1763641 - 1763456 - | hypothetical protein CKL_1673 1764070 - 1763810 - | spore coat protein CKL_1674 1764297 - 1764091 - | hypothetical protein TERM 2135 1764141 - 1764169 + g 72 -6 -4.48299 | opp_overlap 1764144 CAAAATTTTGTCTAT GAACTTGAGCAG CCTCA CTGCACAAATTC TTTATTTGAATATCA CKL_1675 1765275 - 1764430 - | hypothetical protein CKL_1676 1765606 - 1765268 - | transcriptional regulator TERM 2136 1765667 - 1765699 + H 78 -10.1 -2.53822 | opp_overlap 1765664 1765668, overlap 1765666 1765664 TATTATTATAAATGA ATTCAACTATTATGT AAA GCATAATAGTTGAAA ATATTGTCCACTAAA TERM 2137 1765698 - 1765668 - H 100 -12.9 -3.6363 | opp_overlap 1765667 1765666 1765664, overlap 1765664 ATTATTATAAATGAA TTCAACTATTATG TAAAG CATAATAGTTGAA AATATTGTCCACTAA CKL_1677 1765809 - 1766186 + | hypothetical protein TERM 2138 1766443 - 1766456 + G 74 -3.9 -5.14477 | TAGTTTAAATCATTT TGTAT GGGT ATACA TTTTTTACATATATA CKL_1678 1766315 - 1766971 + | VanZ-related protein TERM 2139 1767106 - 1767078 - f 88 -6.9 -5.30575 | overlap 1767102 TAAAAACTCAAAAAA CTAAATGCACTCT CTC AAAATACATTTAG TTTAACTAAAAATTA TERM 2140 1767202 - 1767228 + F 100 -9 -5.63517 | opp_overlap 1767202 1767206 AACCCAGTTTTAAAA TAAATTATCGTA AAC TATGATAATTTA TTTTTTATTTAGAAA TERM 2141 1767228 - 1767202 - f 72 -6.8 -4.1196 | opp_overlap 1767202, overlap 1767206 AACCCAGTTTTAAAA TAAATTATCGTA AAC TATGATAATTTA TTTTTTATTTAGAAA TERM 2142 1767464 - 1767440 - g 70 -8.1 -3.11988 | overlap 1767439 GTTGAGTTAATAAAT TCTTATAAAGA AAA TCTTTATAAAA TGGCATTTATATACG CKL_1679 1767359 - 1767901 + | RNA polymerase sigma factor TERM 2143 1768541 - 1768527 - g 82 -2.8 -6.09196 | CCCAAAATAAAAAAA CTTTTG GTT CAATAG AGTTAATAAGTATAA CKL_1680 1767902 - 1769119 + | hypothetical protein CKL_1681 1770635 - 1769268 - | two component sensor kinase TERM 2144 1770151 - 1770131 - G 79 -2.7 -5.87996 | opp_overlap 1770131, overlap 1770134 TAAGTAAGAAAAAAA TAATTATAA AAA TTATAAATA TCATTATACCTACCA TERM 2145 1770148 - 1770134 - G 73 -4.4 -4.96435 | opp_overlap 1770131, overlap 1770131 GTAAGAAAAAAATAA TTATAA AAA TTATAA ATATCATTATACCTA CKL_1682 1771308 - 1770619 - | transcriptional regulator CKL_1683 1772523 - 1771363 - | hypothetical protein CKL_1684 1773445 - 1772516 - | ABC transporter ATPase TERM 2146 1773510 - 1773496 - R 84 -5.8 -5.32599 | TATAAAATACAAAAA TATACT AAA AGTATA ATAAAAATAAAGAAA CKL_1685 1774175 - 1773597 - | hypothetical protein CKL_1686 1775669 - 1774311 - | efflux pump TERM 2147 1775050 - 1775040 - G 74 -4 -5.16841 | opp_overlap 1775040 GTATACCAATAAAAA TATG AAA CATA TTATTTGGGAAATGT TERM 2148 1776081 - 1776057 - H 74 -8.1 -3.65353 | CTAAATCACTTCAAA TACCTATATTA TAC TAATATAGATA AAGACAATTATACTT CKL_1687 1776243 - 1776527 + | phosphoglycerate mutase CKL_1688 1776684 - 1776908 + | phosphoglycerate mutase TERM 2149 1777116 - 1777058 - T 83 -7.8 -4.7254 | gap 3, opp_overlap 1777060 1777061, overlap 1777059 1777060 1777097 ATCTGGTACCAAAAA GGCTCCTTGTAGGTTCAGGTGGAGTTTTC TATA GAAAACTCCACCTGAACTT-CA-GAAGA- ACTTATCCAGACGCA TERM 2150 1777116 - 1777059 - T 100 -13.8 -3.43042 | gap 2, opp_overlap 1777060 1777061, overlap 1777058 1777060 1777097 TCTGGTACCAAAAAG GCTCCTTGTAGGTTCAGGTGGAGTTTTC TATA GAAAACTCCACCTGAACTT-CA-GAAGA ACTTATCCAGACGCA TERM 2151 1777060 - 1777118 + T 100 -13.5 -3.29043 | gap 1, opp_overlap 1777058 1777059 1777060 1777097, overlap 1777061 CTGGTACCAAAAAGG CTCCTTGT-AGGTTCAGGTGGAGTTTTC TATA GAAAACTCCACCTGAACTTCAGAAGAAC TTATCCAGACGCATT TERM 2152 1777115 - 1777060 - T 100 -17.3 -2.65504 | gap 2, opp_overlap 1777060 1777061, overlap 1777058 1777059 1777097 CTGGTACCAAAAAGG CTCCTTGTAGGTTCAGGTGGAGTTTTC TATA GAAAACTCCACCTGAACTT-CA-GAAG AACTTATCCAGACGC TERM 2153 1777061 - 1777117 + T 100 -17 -2.57211 | gap 1, opp_overlap 1777060 1777058 1777059 1777097, overlap 1777060 TGGTACCAAAAAGGC TCCTTGT-AGGTTCAGGTGGAGTTTTC TATA GAAAACTCCACCTGAACTTCAGAAGAA CTTATCCAGACGCAT CKL_1689 1779211 - 1777187 - | enoate reductase TERM 2154 1778170 - 1778160 - G 73 -4.6 -5.04249 | TTGTCAAAAAACAAA CGCC CAA GGCA GCCCTGATTACATGC CKL_1690 1779661 - 1779236 - | NADH oxidase CKL_1691 1780385 - 1779894 - | hypothetical protein TERM 2155 1780270 - 1780255 - G 95 -10.4 -4.38712 | opp_overlap 1780254 1780253 CTCATTTTGATAAAA GCGCCA TTAG TGGCGC AATTTTCAATAGTTA TERM 2156 1780420 - 1780461 + r 74 -8.9 -2.80994 | opp_overlap 1780421 AATAATTTATTATAA AGGCCTGTTTCAAAATG TAAAAACT CATTTTGAAACAGACCA TCTACTAACCTTGAA TERM 2157 1780460 - 1780421 - R 100 -14.6 -3.99806 | opp_overlap 1780420 ATAATTTATTATAAA GGCCTGTTTCAAAATG TAAAAACT CATTTTGAAACAGACC ATCTACTAACCTTGA CKL_1692 1782055 - 1780466 - | ABC transporter ATPase TERM 2158 1782379 - 1782359 - R 82 -5.5 -5.4387 | ATACAAATTAAAAAA CTAGAATTT GGG AATTTCTAG AATAGCCCCTCTGTT ilvD 1784029 - 1782359 - | hypothetical protein TERM 2159 1783030 - 1783050 + g 72 -7.1 -3.95584 | opp_overlap 1783034 TAATCAAATCTGTAC TTAATAAAT TCA ATTTATTAA TTTCATTCATAACAG TERM 2160 1783746 - 1783762 + g 74 -9.5 -2.67171 | opp_overlap 1783746, overlap 1783745 1783743 GAATCTGCAATTAAA TCTCTTG TAA CAAGAGA ATATTTCATGCCCTG TERM 2161 1783762 - 1783746 - G 83 -9.5 -3.91798 | opp_overlap 1783746 1783745 1783743 GAATCTGCAATTAAA TCTCTTG TAA CAAGAGA ATATTTCATGCCCTG TERM 2162 1784164 - 1784128 - R 95 -9.2 -5.04385 | gap 1, opp_overlap 1784129 1784131, overlap 1784115 1784131 TATATTTTGAAAAAA TAAGTGTTAATTTTTAT AATT ATAAAAATTAACACT-A TTTTACTCTTCATAT TERM 2163 1784129 - 1784164 + r 100 -10.8 -4.45399 | opp_overlap 1784128 1784131, overlap 1784131 ATATTTTGAAAAAAT AAGTGTTAATTTTTAT AATT ATAAAAATTAACACTA TTTTACTCTTCATAT TERM 2164 1784131 - 1784162 + r 100 -13.4 -3.82455 | opp_overlap 1784128 1784131, overlap 1784129 ATTTTGAAAAAATAA GTGTTAATTTTTAT AATT ATAAAAATTAACAC TATTTTACTCTTCAT TERM 2165 1784162 - 1784131 - R 100 -13.4 -4.62085 | opp_overlap 1784131 1784129, overlap 1784128 ATTTTGAAAAAATAA GTGTTAATTTTTAT AATT ATAAAAATTAACAC TATTTTACTCTTCAT CKL_1694 1784853 - 1784167 - | transcriptional regulator TERM 2166 1785048 - 1785010 - R 70 -6.1 -4.12532 | gap 1, opp_overlap 1785014 1785017, overlap 1785011 TTTGCTATAGAGAAA TGCTTAT-CTCCCACCTT GAAA AAGATGGGAGTATTAGCT AATTCCAGCACCGGA TERM 2167 1785047 - 1785011 - R 78 -9.6 -3.07198 | gap 1, opp_overlap 1785014 1785017, overlap 1785010 TTGCTATAGAGAAAT GCTTAT-CTCCCACCTT GAAA AAGATGGGAGTATTAGC TAATTCCAGCACCGG TERM 2168 1785017 - 1785040 + r 78 -9.6 -3.12595 | opp_overlap 1785011 1785010, overlap 1785014 TAGAGAAATGCTTAT CTCCCACCTT GAAA AAGATGGGAG TATTAGCTAATTCCA CKL_1695 1785891 - 1785073 - | methyl-accepting chemotaxis protein TERM 2169 1785334 - 1785352 + g 78 -8.9 -3.53012 | CGCCTCTCCTGCTCT TGCAGCT TCAAT AGCTGCA TTTAAAGCCAGCAAG TERM 2170 1785826 - 1785796 - G 79 -4.8 -5.1523 | overlap 1785797 1785800 GCGATAATACAAAAA TTCATTAGTATCTG CTA CAGCTACTAATAGA TCCTCCTGCAAAATA bioB2 1786976 - 1785972 - | biotin synthase CKL_1697 1788230 - 1787058 - | hypothetical protein CKL_1698 1788465 - 1788875 + | hypothetical protein TERM 2171 1789737 - 1789722 - g 72 -3.3 -5.17576 | TATGAAGCTAAAAAA GAACA GGATCA TGTTC CAACATTTTCAGATG CKL_1699 1788999 - 1790717 + | hypothetical protein CKL_1700 1790989 - 1790822 - | hypothetical protein TERM 2172 1790900 - 1790873 - G 73 -9.3 -2.93454 | opp_overlap 1790873 1790872 1790897, overlap 1790872 AAACAGTATAATAAG TGCCAGTATCA TTATAT TAATACTGGCA AATTTTTTTCCCTCT gerKC2 1792360 - 1791122 - | GerKC2 gerKB2 1793466 - 1792369 - | GerKB2 TERM 2173 1793144 - 1793127 - G 84 -3.5 -5.86061 | gap 1 TGTTAGGAAAAAAAA GTG-TGTT AAT AACAGCAC AATCATCAGCTAAAT gerKA2 1794983 - 1793487 - | GerKA2 TERM 2174 1794398 - 1794420 + g 74 -7.8 -3.81488 | opp_overlap 1794404, overlap 1794399 1794401 CAATATTTTTTATGT ACATGATGAA TAC TTCATCATGA TTATCTTTACCAAAG TERM 2175 1794399 - 1794419 + g 86 -11.3 -2.88571 | opp_overlap 1794404, overlap 1794398 1794401 AATATTTTTTATGTA CATGATGAA TAC TTCATCATG ATTATCTTTACCAAA TERM 2176 1794401 - 1794417 + g 70 -8.1 -2.99057 | opp_overlap 1794404, overlap 1794399 1794398 TATTTTTTATGTACA TGATGAA TAC TTCATCA TGATTATCTTTACCA CKL_1704 1795341 - 1795826 + | hypothetical protein TERM 2177 1796331 - 1796319 - g 84 -6.3 -5.23292 | overlap 1796321 CTAGATAAAATAAAA CTTCT TAC AGAAG AAGGCATAAAGGCAA CKL_1705 1795848 - 1796909 + | hypothetical protein TERM 2178 1797194 - 1797205 + G 70 -4.4 -4.90525 | opp_overlap 1797194, overlap 1797197 TAACCTGGCCTCAAA CTGT AGAA ACAG TTTTGTTTCAAGTTC CKL_1706 1796965 - 1798050 + | ABC transporter permease TERM 2179 1798442 - 1798420 - g 100 -12.2 -3.90729 | overlap 1798431 AAGAATCTCTAGAAA CTTTAGGAAT ATC ATTCCTAAAG AATAAAATTTATACA CKL_1707 1798047 - 1798832 + | ABC transporter ATPase CKL_1708 1798874 - 1799956 + | ABC transporter solute-binding protein CKL_1709 1799998 - 1800276 + | transporter protein CKL_1710 1800778 - 1800521 - | hypothetical protein CKL_1711 1800998 - 1801360 + | transcriptional regulator TERM 2180 1801507 - 1801476 - g 77 -3.2 -5.54894 | AATTTAGTAAAAAAA TTAGTTGAAAAT GTTTTTGG ATTGTCAACTAA TGAAAGGCTTGGGGG CKL_1712 1801395 - 1802411 + | transporter protein CKL_1713 1802464 - 1802691 + | redox-active disulfide protein CKL_1714 1802862 - 1803113 + | hypothetical protein CKL_1715 1803139 - 1803468 + | transposase CKL_1716 1803669 - 1804394 + | transposase CKL_1717 1804406 - 1804633 + | hypothetical protein TERM 2181 1804696 - 1804649 - f 72 -7.4 -3.92075 | gap 1, opp_overlap 1804652 1804653, overlap 1804650 1804653 ATTGTGATCTATAAA TTTAT-TTAGGATATAATGTTAC ATA GTAACATCATATCCTAAGATTAT GTAACATTCAATAGC TERM 2182 1804695 - 1804650 - f 86 -10.9 -2.94924 | gap 1, opp_overlap 1804652 1804653, overlap 1804649 1804653 TTGTGATCTATAAAT TTAT-TTAGGATATAATGTTAC ATA GTAACATCATATCCTAAGATTA TGTAACATTCAATAG TERM 2183 1804652 - 1804692 + F 90 -10.7 -3.52192 | opp_overlap 1804650 1804649 1804653, overlap 1804653 GTGATCTATAAATTT ATTTAGGATATAATGTTAC ATA GTAACATCATATCCTAAGA TTATGTAACATTCAA TERM 2184 1804653 - 1804691 + F 100 -14.2 -2.70994 | opp_overlap 1804650 1804649 1804653, overlap 1804652 TGATCTATAAATTTA TTTAGGATATAATGTTAC ATA GTAACATCATATCCTAAG ATTATGTAACATTCA TERM 2185 1804691 - 1804653 - f 100 -14.2 -2.71325 | opp_overlap 1804653 1804652, overlap 1804650 1804649 TGATCTATAAATTTA TTTAGGATATAATGTTAC ATA GTAACATCATATCCTAAG ATTATGTAACATTCA TERM 2186 1804705 - 1804715 + F 71 -4 -5.02502 | AGATTATGTAACATT CAAT AGC ATTG TTTTTATGTAATCTC CKL_1718 1805075 - 1805548 + | phosphatase CKL_1719 1806902 - 1805697 - | Na+/H+ antiporter protein TERM 2187 1806871 - 1806861 - G 70 -4 -5.00616 | TTCGCTTCTAAAAAA GTTT AAA AAAC TATAAGTTCTATTGT TERM 2188 1806967 - 1806952 - H 74 -2.5 -5.69262 | opp_overlap 1806953 1806954, overlap 1806954 TTACAAAAATAAAAA GAGAG GGAAAG CCCTC GTTTATGGGATTAAT TERM 2189 1806967 - 1806954 - H 82 -8.1 -4.45545 | opp_overlap 1806954 1806953, overlap 1806952 ACAAAAATAAAAAGA GAGGG AAAG CCCTC GTTTATGGGATTAAT CKL_1720 1807335 - 1808132 + | polysaccharide deacetylase TERM 2190 1808365 - 1808343 - f 79 -3.4 -5.72207 | TCTAAAGTAAAAAAA TAAGCACCTA TGC CAGGCACCTA TTTTCGGAGTATTAA TERM 2191 1808548 - 1808564 + F 70 -2.3 -5.54885 | opp_overlap 1808548, overlap 1808556 ATTATTAAAGTAAAT CAACTTT TTA AAAATTG TTTTTTATTAATATT CKL_1721 1809124 - 1809699 + | transcriptional regulator TERM 2192 1809708 - 1809731 + F 76 -6.8 -4.5538 | opp_overlap 1809709 1809711, overlap 1809709 TATTTAGCTTATTAT ATAGCTTAGT TATT ACTAAGCTAG TTTTATGCATTTTAT TERM 2193 1809709 - 1809730 + F 86 -10.3 -3.31601 | opp_overlap 1809709 1809711, overlap 1809708 ATTTAGCTTATTATA TAGCTTAGT TATT ACTAAGCTA GTTTTATGCATTTTA TERM 2194 1809730 - 1809709 - f 83 -10.3 -2.79915 | opp_overlap 1809708 1809709, overlap 1809711 ATTTAGCTTATTATA TAGCTTAGT TATT ACTAAGCTA GTTTTATGCATTTTA TERM 2195 1809728 - 1809711 - f 71 -8.5 -2.94747 | opp_overlap 1809709 1809708, overlap 1809709 TTAGCTTATTATATA GCTTAGT TATT ACTAAGC TAGTTTTATGCATTT TERM 2196 1810887 - 1810897 + G 79 -2.6 -5.75599 | TATAATAACAATTGC TATT TTA AATA TTTTTTTATACTTTG CKL_1722 1809784 - 1811229 + | efflux pump TERM 2197 1811294 - 1811250 - f 100 -9 -5.46129 | opp_overlap 1811254, overlap 1811254 CAACAAAGTAAAAAA TGAATTGAGGAGTG-CTGAAAT TAA ATTTTAGACACTCCTCAATT-A TTATTAATTTGAATC TERM 2198 1811254 - 1811291 + F 100 -14.5 -4.067 | gap 1, opp_overlap 1811254 1811250 AAAGTAAAAAATGAA TTGAGGAGTG-CTGAAAT TAA ATTTTAGACACTCCTCAA TTATTATTAATTTGA TERM 2199 1811291 - 1811254 - f 100 -12.3 -4.00212 | gap 1, opp_overlap 1811254, overlap 1811250 AAAGTAAAAAATGAA TTGAGGAGTG-CTGAAAT TAA ATTTTAGACACTCCTCAA TTATTATTAATTTGA CKL_1723 1811690 - 1812130 + | transposase CKL_1724 1812141 - 1813421 + | transposase TERM 2200 1813595 - 1813584 - f 74 -2.2 -5.58179 | GAGCATAATAAAAAA CTCC AAGA GGAA GATAGCAGACATCAT CKL_1725 1813638 - 1813811 + | hypothetical protein CKL_1726 1813790 - 1814341 + | hypothetical protein CKL_1727 1815277 - 1814552 - | transposase CKL_1728 1815807 - 1815478 - | transposase TERM 2201 1816174 - 1816201 + r 78 -9.2 -3.29591 | gap 1, opp_overlap 1816177 1816178, overlap 1816172 1816178 CTTAATTGGCAAATA CAATCCACCTGCT GAA AGCAGGTGG-TAG TTGAGTTTAAATCAT TERM 2202 1816199 - 1816177 - R 95 -12 -3.82603 | opp_overlap 1816174 1816172 1816178, overlap 1816178 AATTGGCAAATACAA TCCACCTGCT GAA AGCAGGTGGT AGTTGAGTTTAAATC TERM 2203 1816178 - 1816198 + r 100 -15.5 -2.82156 | opp_overlap 1816178 1816177, overlap 1816174 1816172 ATTGGCAAATACAAT CCACCTGCT GAA AGCAGGTGG TAGTTGAGTTTAAAT TERM 2204 1816198 - 1816178 - R 100 -15.5 -2.88839 | opp_overlap 1816174 1816172 1816178, overlap 1816177 ATTGGCAAATACAAT CCACCTGCT GAA AGCAGGTGG TAGTTGAGTTTAAAT CKL_1729 1817663 - 1816281 - | efflux pump CKL_1730 1820259 - 1818097 - | polyketide synthase-related protein TERM 2205 1819277 - 1819296 + g 70 -7.2 -3.59087 | opp_overlap 1819293, overlap 1819293 TCAAAAGCTTTTATT GCTTTTTC AGTA GAAAGAGC TTTAAACATGCTCTT TERM 2206 1819551 - 1819575 + g 70 -4.3 -4.78266 | ACCATGTACCTAGCG TTTTAGGTAGT AAT ACTTCCTCAAA TTTCTTCTTTTCTTT CKL_1731 1823285 - 1820256 - | polyketide synthase TERM 2207 1821139 - 1821161 + g 82 -7.8 -4.37198 | opp_overlap 1821141 AATGCAATTTCTAAG TATGTAGTAC CAG GTACAACATA TTTTCCATTTACCTT TERM 2208 1821861 - 1821874 + g 71 -3.1 -5.20222 | AATTGTAAGAACATT TAACC CTTG GGTTG TTTTATTTATTTGAT CKL_1732 1824590 - 1823316 - | PKS acyltransferase domain-containing protein CKL_1733 1830681 - 1824676 - | hybrid nonribosomal peptide synthetase/polyketide synthase TERM 2209 1825551 - 1825563 + g 79 -3.3 -5.53079 | TTCTGCCAGTATCAT GCTCT GGA AGTGC TTTTTTGTCTATTTT TERM 2210 1829478 - 1829490 + g 80 -7.7 -4.19238 | overlap 1829473 ATTCTTTATGTTTTA GCGAT AAA ATCGC TTTTACCATTCCAGC CKL_1734 1832755 - 1830695 - | NRPS adenylation domain containing protein CKL_1735 1833491 - 1832775 - | thioesterase TERM 2211 1833953 - 1833997 + H 73 -5.3 -4.64383 | gap 1 AGTTATTTTTATTGC CCCATAAATCATGTG-CTTC CACCAA GAACTTATATGATTTATGGG TTTTACTTTATCATT CKL_1736 1834693 - 1835379 + | 4'-phosphopantetheinyl transferase CKL_1737 1835777 - 1835625 - | hypothetical protein TERM 2212 1836000 - 1836027 + H 85 -10.2 -3.37493 | opp_overlap 1835999 1835998 1836007, overlap 1836007 GGTTTTTTCATAAGT GTATAAATATAA TGAT TTATATTTATAC TTCATCTGTTAAACC CKL_1738 1836464 - 1837603 + | transposase TERM 2213 1839166 - 1839155 - g 71 -3 -5.15969 | overlap 1839161 TGGTAAGCTAAAAAA GATA GATA TATC AGATATAGAAAATGA CKL_1739 1837596 - 1839548 + | transposase CKL_1740 1839529 - 1839915 + | transposase CKL_1741 1839932 - 1840813 + | transporter protein TERM 2214 1841474 - 1841494 + G 79 -4.7 -5.28983 | overlap 1841475 CTGCATAATTGTCCG TCTTGCATG TCA TATGCAGGG TTTTTATGTTTTCAA CKL_1742 1840989 - 1841939 + | metal-binding protein vnfN 1843286 - 1841946 - | VnfN TERM 2215 1842239 - 1842210 - G 80 -7.2 -4.55287 | gap 1, opp_overlap 1842211 1842215 1842235, overlap 1842211 1842230 1842234 TCCATCTACAGAAAA TGCTACCTTGGGT GAAAT ACCCAAGGT-GCT TAGCTCCCAGTTGAG TERM 2216 1842211 - 1842238 + g 87 -11.4 -3.06831 | gap 1, opp_overlap 1842211 1842210 1842230 1842234, overlap 1842215 1842235 CCATCTACAGAAAAT GCTACCTTGGGTG AAA TACCCAAGGT-GC TTAGCTCCCAGTTGA TERM 2217 1842238 - 1842211 - G 83 -10.7 -3.3269 | gap 1, opp_overlap 1842211 1842215 1842235, overlap 1842210 1842230 1842234 CCATCTACAGAAAAT GCTACCTTGGGT GAAAT ACCCAAGGT-GC TTAGCTCCCAGTTGA TERM 2218 1842215 - 1842235 + g 87 -11.9 -2.75183 | opp_overlap 1842211 1842210 1842230 1842234, overlap 1842211 CTACAGAAAATGCTA CCTTGGGTG AAA TACCCAAGG TGCTTAGCTCCCAGT TERM 2219 1842235 - 1842257 + g 91 -5.6 -5.71638 | opp_overlap 1842211 1842210 1842230 1842234, overlap 1842211 GGTGAAATACCCAAG GTGCTTAGCT CCC AGTTGAGTAC TTTTTTTGCTTCTTC vnfE 1844797 - 1843271 - | VnfE TERM 2220 1844232 - 1844242 + g 80 -5.4 -5.14163 | ATATTTACAGAATGT GCTA ATC TAGC TTTTTCTTCCTCAGT vnfK 1846295 - 1844910 - | VnfK vnfG 1846657 - 1846319 - | VnfG TERM 2221 1846384 - 1846405 + g 81 -2.3 -6.02345 | CATCTAACAATTTTG TCTGTAGGT CATT AATTACAGA TTTTTTTTCTGATTC vnfD 1848054 - 1846666 - | VnfD vnfH 1849067 - 1848240 - | nitrogenase reductase nifB2 1850545 - 1849199 - | NifB2 TERM 2222 1850996 - 1850976 - H 70 -4.9 -4.72007 | overlap 1850993 TTTTATCAAAATAAA TATACTATT AAT AATAATATA TCAAAAATATAGCAT TERM 2223 1851400 - 1851419 + H 75 -5.2 -4.9725 | TATTAAAAACATCCA TTTATATT GTGT AATATAAA TTTTTATATCAAAAT CKL_1750 1851542 - 1851910 + | hypothetical protein CKL_1751 1851870 - 1852730 + | hypothetical protein CKL_1752 1852720 - 1853316 + | hypothetical protein CKL_1753 1853416 - 1853742 + | nitrogen regulatory protein P-1 CKL_1754 1853760 - 1854131 + | nitrogen regulatory protein P-II TERM 2224 1854158 - 1854194 + T 91 -8.2 -5.1167 | opp_overlap 1854158 TCTGTCAATAAAAAA GGATTTATTATGTTGT TTTAC ACTACCTAATAAATCC TTTTTCTATTGAATT TERM 2225 1854194 - 1854158 - T 95 -8.2 -5.4505 | opp_overlap 1854158 TCTGTCAATAAAAAA GGATTTATTATGTTGT TTTAC ACTACCTAATAAATCC TTTTTCTATTGAATT CKL_1755 1854868 - 1854230 - | hypothetical protein CKL_1756 1855573 - 1854944 - | FeMo cofactor biosynthesis-related protein nifV1 1856426 - 1855617 - | NifV1 TERM 2226 1856034 - 1856048 + g 70 -7.2 -3.66378 | ATCTTCCAATCCCAC GGATAT CTC ATATCC TTTGCCTAAAGTGTA nifV2 1857644 - 1856583 - | NifV2 CKL_1759 1858279 - 1857869 - | hypothetical protein TERM 2227 1858457 - 1858490 + H 74 -4.9 -5.1287 | gap 1, opp_overlap 1858455 1858457 1858458, overlap 1858450 1858457 1858458 TATAACAATATAATA T-TTATAATTTGCAGT TAT ACTACAAATTATAACA TTTTTTACATATACC TERM 2228 1858489 - 1858457 - H 75 -8.7 -3.51442 | opp_overlap 1858450 1858457 1858457 1858458, overlap 1858455 1858458 TATAACAATATAATA TTTATAATTTGCAGT TAT ACTACAAATTATAAC ATTTTTTACATATAC TERM 2229 1858488 - 1858458 - H 93 -12.2 -2.6978 | opp_overlap 1858450 1858457 1858457 1858458, overlap 1858457 1858455 ATAACAATATAATAT TTATAATTTGCAGT TAT ACTACAAATTATAA CATTTTTTACATATA TERM 2230 1858458 - 1858488 + H 80 -10 -2.79476 | opp_overlap 1858458 1858457 1858455, overlap 1858450 1858457 1858457 ATAACAATATAATAT TTATAATTTGCAGT TAT ACTACAAATTATAA CATTTTTTACATATA TERM 2231 1859566 - 1859555 - g 86 -3 -6.23545 | GTCAAATAAAAAAAA TACT GGAT AGTA TAGATAAAGATACCG CKL_1760 1858684 - 1860270 + | protease inhibitor TERM 2232 1860284 - 1860313 + F 91 -6.6 -5.41941 | opp_overlap 1860284 AAATTATAAATAGAA GATTTATCTCAG TCTAGT TTGGGATAAATC TTTTTATTTAATTTC TERM 2233 1861452 - 1861438 - g 71 -8.6 -2.84317 | opp_overlap 1861438, overlap 1861437 1861440 ATGTGAGAAAAAATT TAGGTC CAA GACCTA TTGTTCGTATATATT TERM 2234 1861438 - 1861452 + G 79 -8.6 -3.81691 | opp_overlap 1861438 1861437 1861440 ATGTGAGAAAAAATT TAGGTC CAA GACCTA TTGTTCGTATATATT CKL_1761 1860669 - 1861553 + | hypothetical protein TERM 2235 1861655 - 1861678 + T 77 -5.3 -5.17576 | opp_overlap 1861655 GGATAAAATAAAAAA CACCACTAC TATATT GTAATGGTG TTTTTTGCCTTGATA TERM 2236 1861678 - 1861655 - T 100 -7.5 -5.86976 | opp_overlap 1861655 GGATAAAATAAAAAA CACCACTAC TATATT GTAATGGTG TTTTTTGCCTTGATA metH2 1863435 - 1861663 - | bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein TERM 2237 1862019 - 1862001 - G 74 -9.6 -2.78032 | overlap 1862000 1861998 CTTCTGTTAAAATAG GCTGTGTC AAA AACACAGC TATACCATTTTCTAT TERM 2238 1862554 - 1862564 + g 74 -4 -5.30686 | TTTAACAACTGGTTT TTCA GTG TGAA TTTTTTCTGCCTGTT metE 1865720 - 1863432 - | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase CKL_1764 1866291 - 1865860 - | hypothetical protein CKL_1765 1868812 - 1866365 - | hypothetical protein CKL_1766 1868990 - 1869469 + | sigma factor CKL_1767 1869471 - 1870148 + | hypothetical protein CKL_1768 1870503 - 1870745 + | hypothetical protein TERM 2239 1870808 - 1870769 - T 100 -15.2 -4.18908 | opp_overlap 1870766 AGACTGTGAAAATAA TGAGATTCAGATGGAGTT TGCT ATCTCCATCCGAACCTCA AAATTACTCCCTCAT bfmBC 1872179 - 1870812 - | BfmBC lplA 1873183 - 1872191 - | hypothetical protein gcvPB 1874647 - 1873184 - | glycine dehydrogenase subunit 2 gcvPA 1875963 - 1874644 - | GcvPA gcvH 1876362 - 1875982 - | hypothetical protein gcvT 1877463 - 1876375 - | hypothetical protein TERM 2240 1877525 - 1877493 - R 100 -12.3 -5.64873 | opp_overlap 1877491 1877489 1877493 TTCAATAATAAAAAA GCACATAAATAAACA ACC TATTTATTTATGCGC TCTGTCTTTTATACC TERM 2241 1877849 - 1877861 + r 79 -4.9 -5.4111 | CTTTAGCAATATCTA TACAT AAT ATGTA TTTTTTATAATTATT CKL_1775 1879079 - 1877829 - | signal transduction protein TERM 2242 1878042 - 1878052 + g 100 -6.8 -5.63517 | overlap 1878043 TACAATACCATCAGG GTGG ATA CCAC TTTTTTCTTTGGAAA TERM 2243 1879145 - 1879127 - R 70 -6.2 -4.15543 | opp_overlap 1879127 TAAATACCTCCAAAA TATAAATA CTA TATTTATA TTACTATAGATTCTA thiC 1880571 - 1879258 - | thiamine biosynthesis protein ThiC TERM 2244 1880669 - 1880690 + r 91 -10.3 -4.0075 | opp_overlap 1880669 AAAACATAATAAAAA GCATAATTC CGTA GAATTATGC TTTAATTACTTAAAT TERM 2245 1880690 - 1880669 - R 100 -10.3 -5.35365 | opp_overlap 1880669 AAAACATAATAAAAA GCATAATTC CGTA GAATTATGC TTTAATTACTTAAAT TERM 2246 1880869 - 1880843 - R 73 -8.3 -3.45033 | opp_overlap 1880828 1880843 1880842 1880845 TATAATGTACCATAA TATTTATTACT AATCA AGTAATAAATA GTTTCAATCATTTTC TERM 2247 1880955 - 1880991 + r 76 -6.7 -4.50661 | opp_overlap 1880958 1880962, overlap 1880956 1880958 1880962 AACTAAGTATTAACT AAATAAACTTCGCCAAA CAT TTTAGCGAAGTTTATAA TTTTCCTTATAACTT TERM 2248 1880956 - 1880990 + r 83 -10.2 -3.29312 | opp_overlap 1880958 1880962, overlap 1880955 1880958 1880962 ACTAAGTATTAACTA AATAAACTTCGCCAAA CAT TTTAGCGAAGTTTATA ATTTTCCTTATAACT TERM 2249 1880958 - 1880988 + r 100 -12.8 -3.20455 | opp_overlap 1880958 1880962, overlap 1880956 1880955 1880962 TAAGTATTAACTAAA TAAACTTCGCCAAA CAT TTTAGCGAAGTTTA TAATTTTCCTTATAA TERM 2250 1880988 - 1880958 - R 100 -15 -3.98113 | opp_overlap 1880956 1880955 1880958 1880962, overlap 1880962 TAAGTATTAACTAAA TAAACTTCGCCAAA CAT TTTAGCGAAGTTTA TAATTTTCCTTATAA TERM 2251 1880984 - 1880962 - R 100 -11.4 -4.58308 | opp_overlap 1880958 1880956 1880955 1880962, overlap 1880958 TATTAACTAAATAAA CTTCGCCAAA CAT TTTAGCGAAG TTTATAATTTTCCTT TERM 2252 1880962 - 1880984 + r 86 -9.2 -4.2331 | opp_overlap 1880962 1880958, overlap 1880958 1880956 1880955 TATTAACTAAATAAA CTTCGCCAAA CAT TTTAGCGAAG TTTATAATTTTCCTT CKL_1777 1881224 - 1880976 - | hypothetical protein CKL_1778 1883777 - 1881333 - | glucose-1-phosphate nucleotidyltransferase TERM 2253 1882474 - 1882461 - G 71 -8.1 -3.36398 | opp_overlap 1882460, overlap 1882460 ACCCATAGACAAAAG CCCTG TGGC CAGGG AATATTTAAACATCT TERM 2254 1883303 - 1883323 + g 77 -8.3 -3.79902 | ATACTTCACCCCATC CTGGCTTCT CCA AAAAGCCAG TTACTTTTCCTTTAT TERM 2255 1883609 - 1883639 + g 81 -9.9 -3.10876 | opp_overlap 1883614, overlap 1883612 TTATTATTTCATCCG GAAGATATTGTAG GGTGG CTCCAATATCTTC TATTCCCGTATTCTT TERM 2256 1883721 - 1883743 + g 74 -9.2 -3.14468 | overlap 1883724 GGGTTTAGGTATGTT GCAGGTTAAG GGC CTTAACCTGG TTCCCTCTCCTCCGG TERM 2257 1883724 - 1883740 + g 74 -9.5 -2.77658 | overlap 1883721 TTTAGGTATGTTGCA GGTTAAG GGC CTTAACC TGGTTCCCTCTCCTC CKL_1779 1885299 - 1883809 - | glycosyltransferase TERM 2258 1885367 - 1885338 - R 70 -8.1 -3.06515 | opp_overlap 1885338 1885337, overlap 1885337 1885340 TTTTATCTTTAAAAT TATCAGTAAAATT GTCA AAATTTACTGATA TAGTTTTGTTTCTTA TERM 2259 1885338 - 1885367 + r 73 -8.1 -3.38374 | opp_overlap 1885337 1885338 1885340, overlap 1885337 TTTTATCTTTAAAAT TATCAGTAAAATT GTCA AAATTTACTGATA TAGTTTTGTTTCTTA CKL_1780 1887054 - 1885447 - | glycogen phosphorylase-related protein TERM 2260 1887295 - 1887336 + r 73 -5.5 -4.71186 | gap 1, opp_overlap 1887293 1887295 1887302 1887304 ATTTATTGAAAAGCA TATGAAAGACCACCAATT ATTGACA AATTGATGGT-TTTCATA TTTTGTATTAGTAGT CKL_1781 1887569 - 1887369 - | hypothetical protein TERM 2261 1888509 - 1888520 + G 72 -7.2 -3.77087 | AAAAATACTCCAGGA GGGG ATTA CCCC TTTAGCTATTGAATA CKL_1782 1887772 - 1889154 + | FAD/FMN-containing dehydrogenase TERM 2262 1889222 - 1889171 - T 78 -9 -3.26188 | opp_overlap 1889171, overlap 1889178 1889183 AATATTATAATTCAA GTTAAAAGTTAAGAGTCATGGG ACAAATCA CCCATAACTCTCACTTTTTAAC TTATTAACTATTCAT TERM 2263 1889210 - 1889183 - T 70 -7.8 -3.39352 | opp_overlap 1889171, overlap 1889178 1889171 CAAGTTAAAAGTTAA GAGTCATGGG ACAAATCA CCCATAACTC TCACTTTTTAACTTA CKL_1783 1891080 - 1889230 - | transport protein, ATPase and permease component TERM 2264 1890677 - 1890695 + g 74 -6.1 -4.47551 | AATCTGTTTATTTTT TGAGAAA TTTCC TTTCTCA TTTTATAACTTACCT TERM 2265 1891034 - 1891052 + g 100 -8.8 -5.51353 | CCTCCCTGGATCATT CCTCCAGG CCC CCTTGAGG TTTTTCTTATTTTTC CKL_1784 1893302 - 1891077 - | transport protein TERM 2266 1893222 - 1893196 - G 73 -8.1 -3.54771 | TTTACAATATTAGAA GTGTAATCTGG AAGAG CCAAATCACAC ATAGCCTGCACAAAC CKL_1785 1893781 - 1893344 - | hypothetical protein CKL_1786 1893978 - 1894706 + | transporter protein TERM 2267 1894785 - 1894750 - T 100 -9.9 -5.18726 | gap 1 TTTGTATAATAAAAA CAGGTTTCCCAAATAG TTGTC CTATG-GGGAAACCTG CAGAAAAGAGTCACT CKL_1787 1896669 - 1894807 - | transporter protein TERM 2268 1896238 - 1896220 - G 75 -2.4 -5.61913 | AATAAATATAAAAAA TAGAGTTA TAG TGACCCTA TGAGGTGATAAGAAG TERM 2269 1896799 - 1896821 + r 70 -5 -4.64144 | TTATCCAGTTTAACT CAATAAAATA ACT TATTTAATTG TTTTTCACACTTATT CKL_1788 1897713 - 1896871 - | transporter protein TERM 2270 1897273 - 1897287 + g 81 -4.3 -5.5112 | overlap 1897268 AAAGGTTACTTTACC TATGG TAATT CCATA TTTTTTCTTCATCCA TERM 2271 1898003 - 1898058 + r 80 -8.7 -4.00124 | gap 1, opp_overlap 1898005 1898008 1898012, overlap 1898004 1898005 1898008 1898017 CATGCTTAAATCACA TA-CGAGCAAGCAAATGGTAATAGCT CGAAT ATCTATTATCATTTGCTTACTTGATA TTTAATTATAAACTA TERM 2272 1898004 - 1898056 + r 84 -9.4 -3.5891 | opp_overlap 1898005 1898008 1898012, overlap 1898003 1898005 1898008 1898017 ATGCTTAAATCACAT ACGAGCAAGCAAATGGTAATAGCT CGAAT ATCTATTATCATTTGCTTACTTGA TATTTAATTATAAAC TERM 2273 1898005 - 1898055 + r 100 -12.9 -2.74864 | opp_overlap 1898005 1898008 1898012, overlap 1898004 1898003 1898008 1898017 TGCTTAAATCACATA CGAGCAAGCAAATGGTAATAGCT CGAAT ATCTATTATCATTTGCTTACTTG ATATTTAATTATAAA TERM 2274 1898055 - 1898005 - R 88 -10.7 -3.05769 | opp_overlap 1898005 1898004 1898003 1898008 1898017, overlap 1898008 1898012 TGCTTAAATCACATA CGAGCAAGCAAATGGTAATAGCT CGAAT ATCTATTATCATTTGCTTACTTG ATATTTAATTATAAA TERM 2275 1898052 - 1898008 - R 84 -11 -2.74525 | opp_overlap 1898008 1898005 1898004 1898003 1898017, overlap 1898005 1898012 TTAAATCACATACGA GCAAGCAAATGGTAATAGCT CGAAT ATCTATTATCATTTGCTTAC TTGATATTTAATTAT TERM 2276 1898008 - 1898052 + r 90 -11 -3.51058 | opp_overlap 1898005 1898008 1898012, overlap 1898005 1898004 1898003 1898017 TTAAATCACATACGA GCAAGCAAATGGTAATAGCT CGAAT ATCTATTATCATTTGCTTAC TTGATATTTAATTAT TERM 2277 1898048 - 1898012 - R 71 -8.2 -3.26813 | opp_overlap 1898008 1898005 1898004 1898003 1898017, overlap 1898008 1898005 ATCACATACGAGCAA GCAAATGGTAATAGCT CGAAT ATCTATTATCATTTGC TTACTTGATATTTAA CKL_1789 1899056 - 1898187 - | signal transduction protein CKL_1790 1900018 - 1899368 - | phosphatase TERM 2278 1900191 - 1900155 - R 75 -9.7 -2.54171 | opp_overlap 1900163, overlap 1900154 1900151 1900190 ACGTTTAAAAATCAT CATATGAATATTCGAAA TAT TCTCAAATATACATATG TAAAATTAAAATTAT TERM 2279 1900561 - 1900616 + r 100 -8.9 -5.97979 | overlap 1900573 TCATCTAAAATAGTG CCTTTGTTATACG-CTATTCTATTTTT GAAA AAAAATAGAATAGATGTATGA-AAGGG TTTTTTTATTGTTAT TERM 2280 1900573 - 1900604 + r 74 -9 -2.8806 | overlap 1900561 GTGCCTTTGTTATAC GCTATTCTATTTTT GAAA AAAAATAGAATAGA TGTATGAAAGGGTTT TERM 2281 1900875 - 1900844 - R 95 -8.9 -4.90217 | opp_overlap 1900856, overlap 1900835 TAAATATAGTAAAAA CTAAATGCACTCC TTTTAC AAAGTGCATTTAG TCAACTGAAAATAAT CKL_1791 1901173 - 1900892 - | hypothetical protein CKL_1792 1901373 - 1902026 + | hypothetical protein CKL_1793 1902092 - 1903795 + | hypothetical protein TERM 2282 1903822 - 1903877 + T 81 -10.3 -2.67188 | gap 2, opp_overlap 1903825 1903829, overlap 1903825 1903829 TGCTATATCCCTAAA TAATTGATTCTA-TATTCAGG-GGAAG TTTT TTTCCACCTGAATACTAGAATTAATTG ATTATCCTAATATCA TERM 2283 1903874 - 1903825 - T 70 -6.9 -3.93256 | gap 2, opp_overlap 1903825 1903822 1903829, overlap 1903829 TATATCCCTAAATAA TTGATTCTA-TATTCAGG-GGAA GTTTTT TTCCACCTGAATACTAGAATTAA TTGATTATCCTAATA TERM 2284 1903825 - 1903874 + T 85 -9.8 -3.48036 | gap 2, opp_overlap 1903825 1903829, overlap 1903822 1903829 TATATCCCTAAATAA TTGATTCTA-TATTCAGG-GGAAG TTTT TTTCCACCTGAATACTAGAATTAA TTGATTATCCTAATA TERM 2285 1903829 - 1903870 + T 75 -8.4 -3.48466 | gap 2, opp_overlap 1903829 1903825, overlap 1903825 1903822 TCCCTAAATAATTGA TTCTA-TATTCAGG-GGAAG TTTT TTTCCACCTGAATACTAGAA TTAATTGATTATCCT CKL_1794 1905516 - 1903879 - | methyl-accepting transducer TERM 2286 1904501 - 1904517 + g 86 -5.9 -5.4387 | ACTTTATTTATATCT TCTATGG AAT CTATAGA TTTTTTACTTTCTAT TERM 2287 1905579 - 1905555 - R 100 -14.5 -5.20783 | ATTGAAATACAAAAA CCTCTTCTTAA TAA TTAAGAAGAGG CCAAAAAACCACAGC cysN 1907643 - 1905811 - | CysN cysD 1908523 - 1907723 - | sulfate adenylyltransferase subunit 2 TERM 2288 1908038 - 1908024 - G 74 -7.2 -4.08216 | overlap 1908035 TTACCCTTTTTAAAA TCAGTT TTA AACTGA TCCCAGAGTTCAGGA CKL_1797 1908856 - 1908539 - | hypothetical protein aprA 1910531 - 1908840 - | adenylylsulfate reductase cysC 1911135 - 1910536 - | hypothetical protein cysA 1912290 - 1911232 - | hypothetical protein cysW 1913119 - 1912292 - | CysW cysT 1913949 - 1913131 - | CysT TERM 2289 1913743 - 1913730 - G 70 -4.5 -4.77896 | overlap 1913732 TAATCAATCCAAAAA CAGCA TTTA TGCCG GCTGCTATAAATGCA sbpA 1915035 - 1913980 - | SbpA TERM 2290 1915299 - 1915273 - R 100 -8.1 -5.64421 | AGTCCAAATAAAAAA CTTCCTATGGA GAGAA CCCATAAGAAG CTGTATCCTATTGTC CKL_1804 1916558 - 1915521 - | transcriptional regulator TERM 2291 1916415 - 1916431 + g 74 -7.3 -4.09805 | TGAAGTCAATTTCGT TCCTGTT CTA AGCAGGA TTTCATTCTTAGTCA CKL_1805 1917261 - 1918091 + | hypothetical protein TERM 2292 1918200 - 1918226 + G 73 -8.2 -3.56643 | opp_overlap 1918190 1918203, overlap 1918190 AATCATATCCGGAGA GGATATATTTAT AAA AAAAATATATCC TTTAACAAATATAGA CKL_1806 1918096 - 1918506 + | hypothetical protein TERM 2293 1920594 - 1920578 - g 72 -7.3 -3.94 | overlap 1920579 GGAAGCTGGAAATAA CTCTTCC TAA GGAAGAA CAGAAATATACACCA TERM 2294 1920593 - 1920579 - g 71 -8.6 -2.95918 | overlap 1920578 GAAGCTGGAAATAAC TCTTCC TAA GGAAGA ACAGAAATATACACC CKL_1807 1918549 - 1920864 + | hypothetical protein TERM 2295 1920887 - 1920914 + F 90 -10.8 -3.44319 | opp_overlap 1920887 1920873, overlap 1920877 TTCACAGTCAGTCAA CTGACATAATTA TATT TGATTATGTCAG TTGTAATGAATTGAG TERM 2296 1920914 - 1920887 - f 73 -8.6 -3.09015 | opp_overlap 1920877 1920887, overlap 1920873 TTCACAGTCAGTCAA CTGACATAATTA TATT TGATTATGTCAG TTGTAATGAATTGAG TERM 2297 1921407 - 1921433 + G 73 -8.2 -3.53224 | ATCCCAAATTAGATG TTTTGGATATAG ACT CTGTATCTAAAA TTTGCAAAGAAAATA CKL_1808 1920938 - 1922167 + | O-acetyl-L-homoserine sulfhydrylase TERM 2298 1922222 - 1922274 + T 86 -7.4 -5.05577 | gap 1, opp_overlap 1922227 1922229 1922230 1922232, overlap 1922229 1922230 TAATAGTGTTGTCTT TAAAATAG-CACCCTTAAATTTTGT TCTT AGAAAATTTAAGGGTGTCTTATTTA TTTTTAGTTTACTTT TERM 2299 1922269 - 1922227 - T 75 -7.3 -4.07568 | gap 1, opp_overlap 1922222 1922229 1922230, overlap 1922229 1922230 1922232 GTGTTGTCTTTAAAA TAG-CACCCTTAAATTTTGT TCTT AGAAAATTTAAGGGTGTCTT ATTTATTTTTAGTTT TERM 2300 1922266 - 1922229 - T 86 -10.1 -3.63744 | opp_overlap 1922222 1922229 1922230, overlap 1922227 1922230 1922232 GTTGTCTTTAAAATA GCACCCTTAAATTTTGT TCTT AGAAAATTTAAGGGTGT CTTATTTATTTTTAG TERM 2301 1922229 - 1922267 + T 93 -9.9 -4.53857 | gap 1, opp_overlap 1922229 1922227 1922230 1922232, overlap 1922222 1922230 GTTGTCTTTAAAATA G-CACCCTTAAATTTTGT TCTT AGAAAATTTAAGGGTGTC TTATTTATTTTTAGT TERM 2302 1922265 - 1922230 - T 100 -13.6 -2.78032 | opp_overlap 1922229 1922222 1922230, overlap 1922229 1922227 1922232 TTGTCTTTAAAATAG CACCCTTAAATTTTGT TCTT AGAAAATTTAAGGGTG TCTTATTTATTTTTA TERM 2303 1922230 - 1922265 + T 100 -13.6 -3.84447 | opp_overlap 1922230 1922229 1922227 1922232, overlap 1922229 1922222 TTGTCTTTAAAATAG CACCCTTAAATTTTGT TCTT AGAAAATTTAAGGGTG TCTTATTTATTTTTA TERM 2304 1922263 - 1922232 - T 83 -10.4 -2.93623 | opp_overlap 1922230 1922229 1922222, overlap 1922230 1922229 1922227 GTCTTTAAAATAGCA CCCTTAAATTTTGT TCTT AGAAAATTTAAGGG TGTCTTATTTATTTT CKL_1809 1922566 - 1922300 - | hypothetical protein TERM 2305 1922905 - 1922866 - R 100 -9.6 -5.24989 | opp_overlap 1922875 1922886, overlap 1922872 GCAGATATCAAAAAA TAAAAATCACCATAGGAA AATA CTCCTATAGTAATTTTCA AATTAAGTAATTCAA TERM 2306 1922899 - 1922872 - R 100 -6.4 -5.77571 | opp_overlap 1922875 1922886, overlap 1922866 ATCAAAAAATAAAAA TCACCATAGGAA AATA CTCCTATAGTAA TTTTCAAATTAAGTA CKL_1810 1923431 - 1922937 - | hypothetical protein TERM 2307 1923287 - 1923322 + g 80 -9.2 -3.72576 | opp_overlap 1923293 1923299, overlap 1923290 1923299 CTATTACTTTACTTA CCATAACAGAAACTTC TGAT GAAGTTTGTGTTATAG TTTGATCAACAACAC TERM 2308 1923290 - 1923319 + g 75 -9.5 -2.96695 | opp_overlap 1923293 1923299, overlap 1923287 1923299 TTACTTTACTTACCA TAACAGAAACTTC TGAT GAAGTTTGTGTTA TAGTTTGATCAACAA TERM 2309 1923492 - 1923445 - R 100 -12.4 -4.3487 | opp_overlap 1923449, overlap 1923435 1923449 ATATATAATTTAAAA TTAATATAGGATAGCTAGTTAA ATAT TTAACTAACTATCCTATATTTT CAACTTAATATTCCT TERM 2310 1923449 - 1923488 + r 100 -15.4 -4.21098 | opp_overlap 1923445 1923449 ATAATTTAAAATTAA TATAGGATAGCTAGTTAA ATAT TTAACTAACTATCCTATA TTTTCAACTTAATAT TERM 2311 1923488 - 1923449 - R 100 -17.6 -3.72395 | opp_overlap 1923449, overlap 1923445 ATAATTTAAAATTAA TATAGGATAGCTAGTTAA ATAT TTAACTAACTATCCTATA TTTTCAACTTAATAT CKL_1811 1923778 - 1923497 - | hypothetical protein CKL_1812 1923998 - 1924492 + | hypothetical protein TERM 2312 1924665 - 1924722 + F 79 -8.9 -3.39481 | opp_overlap 1924688, overlap 1924665 TCTTATTTAATTTTT TTGTATCAATTTTATGTAGTAAATTCT ATGT AGAACATAGTATATAAAATTGGTACAA GTTATTTTTATTGTA CKL_1813 1925222 - 1925503 + | stage III sporulation protein D CKL_1814 1925613 - 1925966 + | hypothetical protein TERM 2313 1926019 - 1926046 + F 86 -7.1 -5.02476 | opp_overlap 1926019 1926023, overlap 1926023 GTATAGTACAAAAAA TAGACGCCAGT TTTACT ACTGGTGTTTA TTTTTTACACACTCT TERM 2314 1926023 - 1926042 + F 80 -5.7 -5.04249 | opp_overlap 1926023 1926019, overlap 1926019 AGTACAAAAAATAGA CGCCAGT TTTACT ACTGGTG TTTATTTTTTACACA CKL_1815 1926242 - 1927222 + | hypothetical protein CKL_1816 1927219 - 1927479 + | hypothetical protein TERM 2315 1927628 - 1927614 - g 74 -5.6 -4.83518 | AATAACAATATAAAA GCCAAG GGA CTAGGC AAAATTTTGAATATC CKL_1817 1927476 - 1927943 + | hypothetical protein TERM 2316 1927954 - 1927972 + T 79 -8.9 -3.49176 | opp_overlap 1927954, overlap 1927952 TATAAAATACAACAA GGGGAAT ATTAA ATTCCCC TCTTTACTGCATTTC TERM 2317 1927972 - 1927954 - T 86 -8.9 -4.12066 | opp_overlap 1927954 1927952 TATAAAATACAACAA GGGGAAT ATTAA ATTCCCC TCTTTACTGCATTTC CKL_1818 1928246 - 1928049 - | hypothetical protein CKL_1819 1928575 - 1928745 + | hypothetical protein TERM 2318 1928744 - 1928760 + F 91 -8 -5.06816 | opp_overlap 1928744 1928743 1928746 CATGGAAAAAGATAT GAGAGC GTGAA GCTCTC TTTTTATTGGGAAAT TERM 2319 1928923 - 1928944 + F 91 -7.2 -5.33026 | opp_overlap 1928923 1928924 TTCTAATTGGTGAAA GCCCTGGG TTTGGT CCTGGGGC TTTTTATTTAAATTA CKL_1820 1929096 - 1929758 + | hypothetical protein CKL_1821 1929764 - 1930909 + | transcription regulator TERM 2320 1931140 - 1931114 - T 91 -6.8 -5.42862 | opp_overlap 1931114 ACACTTTCAAAAAAA TAGTATGATT GGTTGAT AATCATACTA TTTGGAGTGTGGATT TERM 2321 1931114 - 1931140 + T 71 -7.5 -3.64371 | opp_overlap 1931114 ACACTTTCAAAAAAA TAGTATGATTG GTTGA TAATCATACTA TTTGGAGTGTGGATT TERM 2322 1931395 - 1931366 - T 78 -10.1 -2.53015 | opp_overlap 1931366 1931371, overlap 1931371 ATATGTTTTAATCTA TAAAAGCTCTGGC AAAT ACCGGAGCTTTTA TTAAATTGTATTGAT TERM 2323 1931366 - 1931395 + T 93 -11.6 -3.29549 | opp_overlap 1931366 1931371, overlap 1931371 ATATGTTTTAATCTA TAAAAGCTCTGG CAAATA CCGGAGCTTTTA TTAAATTGTATTGAT TERM 2324 1931371 - 1931390 + T 81 -7.1 -4.73635 | opp_overlap 1931371 1931366, overlap 1931366 TTTTAATCTATAAAA GCTCTGG CAAATA CCGGAGC TTTTATTAAATTGTA TERM 2325 1931390 - 1931371 - T 72 -5.6 -4.4715 | opp_overlap 1931366 1931371, overlap 1931366 TTTTAATCTATAAAA GCTCTGGC AAAT ACCGGAGC TTTTATTAAATTGTA TERM 2326 1931441 - 1931424 - T 74 -4.9 -5.05153 | ATTGTAAAAAATAAA TAAGGAT AATT ACCCTTA TAAGTATAAAATATA TERM 2327 1931522 - 1931497 - T 100 -6.9 -5.68023 | opp_overlap 1931497, overlap 1931499 CTATAAGCAAAAAAA TATAGTGGCCT GTTA AGACCACTAAA ATTAATTCTGTTCCT TERM 2328 1931520 - 1931499 - T 90 -9.5 -4.46828 | opp_overlap 1931497, overlap 1931497 ATAAGCAAAAAAATA TAGTGGCCT GTTA AGACCACTA AAATTAATTCTGTTC CKL_1822 1931898 - 1931524 - | hypothetical protein TERM 2329 1932006 - 1931973 - R 83 -6.9 -4.84311 | opp_overlap 1931973 CCTTACATAAGAAAA TTCTCACTCCATC AGAGAAAA GATAGAATGAGAA TTTAAATACTACCCT CKL_1823 1932248 - 1932015 - | hypothetical protein TERM 2330 1932282 - 1932300 + r 73 -3 -5.5353 | opp_overlap 1932267 1932276 1932283, overlap 1932283 CTTTATAATTTAAAA AGGAGCCT TTT AAGCTCCC TTTTTTATTCATCTA TERM 2331 1932299 - 1932283 - R 90 -8.7 -4.78149 | opp_overlap 1932282 1932283, overlap 1932276 TTTATAATTTAAAAA GGAGCCT TTT AAGCTCC CTTTTTTATTCATCT CKL_1824 1932556 - 1932305 - | hypothetical protein CKL_1825 1933481 - 1932642 - | hydrolase CKL_1826 1933752 - 1933498 - | hypothetical protein TERM 2332 1933560 - 1933530 - G 74 -4.1 -5.18726 | gap 1, overlap 1933532 TTCCCATAACAAAAA TAGAGACTGTGACA AATA TGCCA-AGTCCCCA TTTGATTGTTGATAT TERM 2333 1933809 - 1933779 - R 91 -10.6 -4.18494 | opp_overlap 1933784, overlap 1933784 TAGTTTTATGTAAAA TAAAAGAACCTGGT TAA ACCAAGTTCTTTTG AGTTAGATATTTTCA TERM 2334 1933804 - 1933784 - R 100 -10.5 -5.10933 | opp_overlap 1933784, overlap 1933779 TTATGTAAAATAAAA GAACCTGGT TAA ACCAAGTTC TTTTGAGTTAGATAT TERM 2335 1933784 - 1933804 + r 81 -8.3 -4.29176 | opp_overlap 1933784 1933779 TTATGTAAAATAAAA GAACCTGGT TAA ACCAAGTTC TTTTGAGTTAGATAT CKL_1827 1933948 - 1933769 - | hypothetical protein TERM 2336 1934120 - 1934097 - R 87 -8.2 -4.77438 | ATTGAGCATTAAAAA GAGCTCTGGA TTTA TCCAAAACTC TGAATATTTATCGCA CKL_1828 1934804 - 1934163 - | hypothetical protein TERM 2337 1934933 - 1934922 - R 86 -4.4 -5.80951 | AGGCAAAATAAAAAA GCTA TCTC TAGC CCCTATTTTGCCTTG CKL_1829 1935399 - 1934956 - | hypothetical protein CKL_1830 1936110 - 1935418 - | hypothetical protein CKL_1831 1937443 - 1936100 - | hypothetical protein TERM 2338 1936142 - 1936160 + g 70 -6.2 -4.16182 | overlap 1936135 TTTAGGAATATTTGA TTTAAATA TTT TATTTAAA TTTAATTTCTGGTAA TERM 2339 1936724 - 1936740 + g 74 -9.5 -2.61274 | opp_overlap 1936723 1936722, overlap 1936723 CTTGATCCCTAAATT CCATACA TTC TGTATGG CTTCATTCAAATACA TERM 2340 1937197 - 1937175 - G 81 -4.2 -5.68438 | TCATTAAATAAAAAA TCAATAGC TTTCTTT GCTACTGA TTTACTCATTCTCCT CKL_1832 1937813 - 1937436 - | hypothetical protein CKL_1833 1938621 - 1937833 - | hypothetical protein CKL_1834 1939257 - 1938625 - | XkdU related phage protein CKL_1835 1940374 - 1939244 - | XkdT related phage protein CKL_1836 1940849 - 1940379 - | hypothetical protein CKL_1837 1941180 - 1940842 - | hypothetical protein CKL_1838 1942141 - 1941155 - | XkdQ-related protein CKL_1839 1942908 - 1942150 - | hypothetical protein CKL_1840 1943692 - 1943183 - | hypothetical protein TERM 2341 1943631 - 1943663 + g 100 -8.5 -6.23545 | overlap 1943633 TGTTCAGTAAATTGG AACTGCTTCTGAGCT GGT ACTTCAGAAGCAGTC TTTTTTTTATTTAAA TERM 2342 1943633 - 1943661 + g 100 -11.1 -4.74858 | overlap 1943631 TTCAGTAAATTGGAA CTGCTTCTGAGCT GGT ACTTCAGAAGCAG TCTTTTTTTTATTTA CKL_1841 1947439 - 1943699 - | hypothetical protein TERM 2343 1944135 - 1944117 - G 72 -6 -4.42806 | opp_overlap 1944120, overlap 1944105 1944120 CCACCCTTAAACAAA GGAGTGTT AAA AACACTTC CATATCTACTTTTTA CKL_1842 1948379 - 1947639 - | hypothetical protein TERM 2344 1947666 - 1947680 + g 70 -7.2 -3.66356 | opp_overlap 1947666 CACGGTATTACCATA GGTTTT ATT AAAACC TTTAGGATTCACCGT CKL_1843 1948642 - 1948439 - | hypothetical protein CKL_1844 1949170 - 1948745 - | hypothetical protein TERM 2345 1948894 - 1948924 + g 100 -10.5 -5.06585 | overlap 1948891 TTTGATTTAATTCTT CCCGTATAGGAGG TTGGT TCTCCTGTATGGG TTTTTCTCTGATTTC TERM 2346 1949084 - 1949118 + g 86 -5.7 -5.38249 | overlap 1949086 1949087 TATATCTTGACTTTC TAATGGCTGTGCTTG TCCTT CAAGTGCAGCCACTC TTTTTTCTAATTCCT TERM 2347 1949086 - 1949116 + g 83 -8.3 -4.31563 | overlap 1949084 1949087 TATCTTGACTTTCTA ATGGCTGTGCTTG TCCTT CAAGTGCAGCCAC TCTTTTTTCTAATTC TERM 2348 1949087 - 1949115 + g 89 -11.8 -3.17311 | overlap 1949086 1949084 ATCTTGACTTTCTAA TGGCTGTGCTTG TCCTT CAAGTGCAGCCA CTCTTTTTTCTAATT TERM 2349 1949392 - 1949380 - R 80 -6.3 -4.92239 | GCAAAAATTGAAAAA GTTCT TAA AGAAC AGGATTCTAAGAATG TERM 2350 1949793 - 1949771 - R 90 -8.4 -4.78237 | opp_overlap 1949771 1949768 CACCCCATAACAAAA GCACCTGCCA TTA CAGCAAGTGC TTATTTATGTTCTAT CKL_1845 1950228 - 1949809 - | hypothetical protein CKL_1846 1950515 - 1950327 - | hypothetical protein CKL_1847 1951402 - 1950518 - | prophage antirepressor-related protein TERM 2351 1950575 - 1950596 + g 70 -4.5 -4.86731 | gap 1 GGTTTTGTTCTTGCT TGGTATGTCC ACA GGATAT-CCA TTTTCTTTAAGCCAC TERM 2352 1951427 - 1951485 + r 78 -10 -2.54568 | gap 1, opp_overlap 1951413 1951436, overlap 1951436 1951479 TCCTCCTTTGATTTT ATTCCCAAAGTAGGCTATAATAAAGCT ATCGAG GGCTTTATTA-AGCTTACTTTAGGAAC CCTTTTACTATTGCC TERM 2353 1951436 - 1951476 + r 71 -7.9 -3.55203 | gap 1, opp_overlap 1951413 1951436, overlap 1951427 GATTTTATTCCCAAA GTAGGCTATAATAAAGCT ATCGAG GGCTTTATTA-AGCTTAC TTTAGGAACCCTTTT TERM 2354 1951479 - 1951518 + r 90 -11 -3.41378 | opp_overlap 1951485, overlap 1951427 1951485 TTATTAAGCTTACTT TAGGAACCCTTTTACTAT TGCC GTAGTGAAAGGGTTTTTA GTTTTCTTCAATATC TERM 2355 1951485 - 1951512 + r 100 -10 -5.17786 | opp_overlap 1951485, overlap 1951479 AGCTTACTTTAGGAA CCCTTTTACTAT TGCC GTAGTGAAAGGG TTTTTAGTTTTCTTC CKL_1848 1951725 - 1951516 - | hypothetical protein TERM 2356 1951913 - 1951887 - g 84 -5.2 -5.32599 | GAGAAAACATAAAAA GAATTAGAACTC AAA AAGGTCTAACTC AAAAAGAATTAGCTA TERM 2357 1952423 - 1952436 + G 72 -2.4 -5.42259 | opp_overlap 1952423 TTTGAAAAATTCAAA GCAT ATTTAA ATGC TTTTTTTCAAGATAG CKL_1849 1951862 - 1952668 + | phage transcriptional regulator TERM 2358 1952694 - 1952674 - T 77 -9.7 -2.84218 | opp_overlap 1952674, overlap 1952673 1952676 CACTGATTAAAATAG CACCCGCCT TTA AAACGGGTG TGTTTTTCTATGAAA TERM 2359 1952992 - 1952960 - T 77 -6.3 -4.66318 | opp_overlap 1952971, overlap 1952961 ATTATTTCAATAAAA TTTTTGCAATACGCT TCA AGCGTTGTGCAAAAC CCTAGAACAAAATTA TERM 2360 1952991 - 1952961 - T 85 -9.8 -3.39068 | opp_overlap 1952971, overlap 1952960 TTATTTCAATAAAAT TTTTGCAATACGCT TCA AGCGTTGTGCAAAA CCCTAGAACAAAATT CKL_1850 1953718 - 1953005 - | hypothetical protein TERM 2361 1953565 - 1953590 + g 78 -9.7 -3.32807 | overlap 1953556 1953559 AATAATTCCTTATAG GGGTTTCCTCA ATTT TGTGGAGACCC TTAATAATATTTTCA TERM 2362 1953846 - 1953833 - R 86 -4.5 -5.79595 | opp_overlap 1953833 CCCCAAAATAAAAAA CACCC CGAA AGGTG TTTGATATCATTTTT TERM 2363 1953892 - 1953875 - R 100 -6.3 -5.80817 | opp_overlap 1953875 TTGAATATAAAAAAA GAACCAC ATGA GTGATTC TTTTTGAAATTATTG CKL_1851 1954738 - 1953902 - | hypothetical protein CKL_1852 1955484 - 1955029 - | XkdN-related protein CKL_1853 1955964 - 1955566 - | hypothetical protein CKL_1854 1956192 - 1956010 - | hypothetical protein CKL_1855 1956698 - 1956282 - | XkdM-related protein TERM 2364 1956513 - 1956524 + g 74 -2.2 -5.64274 | overlap 1956516 TTTATAACCTTTCAT GGTG CCGG TACC TTTTTTTGTACCTGC CKL_1856 1958135 - 1956717 - | hypothetical protein CKL_1857 1958571 - 1958137 - | hypothetical protein CKL_1858 1959402 - 1958575 - | hypothetical protein TERM 2365 1958610 - 1958626 + g 71 -2.3 -5.49569 | opp_overlap 1958594, overlap 1958596 CCCTGCCATAGATTT TATTCAT GAC AGGAATA TTTTTTCTCTTGATA CKL_1859 1959816 - 1959406 - | hypothetical protein CKL_1860 1960199 - 1959816 - | hypothetical protein TERM 2366 1959871 - 1959882 + g 81 -4.4 -5.40004 | TCTCCATTTATTATC TGTG GATA CACA TTTTTTACTTTCATA CKL_1861 1960525 - 1960196 - | hypothetical protein TERM 2367 1960573 - 1960545 - R 72 -6.1 -4.26076 | TCACCTCCATGAAAA TAGAGTCCATTTA AAA TTAATGAACCCTA TCCTAAAGTTATTTC CKL_1862 1961605 - 1960571 - | hypothetical protein CKL_1863 1961998 - 1961621 - | hypothetical protein CKL_1864 1963467 - 1962019 - | hypothetical protein CKL_1865 1964059 - 1963643 - | hypothetical protein TERM 2368 1964117 - 1964093 - R 100 -9.4 -4.84492 | opp_overlap 1964093 1964106 TTAAGCACAATAAAA GCACCTACTA TTTTT TAGTAAGTGC TTATTAAATAATTTC TERM 2369 1964093 - 1964117 + r 71 -7.2 -3.71924 | opp_overlap 1964093, overlap 1964106 TTAAGCACAATAAAA GCACCTACTA TTTTT TAGTAAGTGC TTATTAAATAATTTC CKL_1866 1964345 - 1964121 - | hypothetical protein CKL_1868 1965682 - 1964351 - | hypothetical protein CKL_1869 1967195 - 1965675 - | phage portal protein, SPP1 Gp6-like protein TERM 2370 1966225 - 1966215 - G 70 -4 -4.94147 | AACAATACAATAAAA TAAG AGG CTTA ACAGTACCTTTGCAT TERM 2371 1966691 - 1966705 + g 76 -6.4 -4.65838 | TGCCCTCTATGTCCT GCCATT CCT GATGGC TTTTTAAAATATATG CKL_1870 1968457 - 1967186 - | putative terminase large subunit CKL_1871 1969229 - 1968447 - | hypothetical protein TERM 2372 1969039 - 1969070 + g 76 -5.2 -5.09221 | CCCTTTTTTCGTTTA GTTGCGCAACTA TTCCCGTT TGATTGCGCAAC TTTATTTTTATTGTC TERM 2373 1969299 - 1969281 - R 75 -7.4 -4.24342 | opp_overlap 1969281 TGGGGGATGAAGAAA GAGCCC TGTTGGG GGGCTC TTTGAATACTATAAA TERM 2374 1969281 - 1969299 + r 76 -8.1 -3.70149 | opp_overlap 1969281 TGGGGGATGAAGAAA GAGCCCT GTTGG GGGGCTC TTTGAATACTATAAA CKL_1872 1971290 - 1969308 - | hypothetical protein CKL_1873 1971384 - 1971635 + | hypothetical protein TERM 2375 1971889 - 1971870 - f 90 -9.3 -4.50976 | opp_overlap 1971869 1971867 TTCTATATCAGAAAA GGAGAGG TATTCG CCTCTCC CTGGTTTGTCTTTAT CKL_1874 1972202 - 1972492 + | hypothetical protein TERM 2376 1972570 - 1972545 - T 80 -5.5 -5.33785 | opp_overlap 1972545 AATCATTATAAAAAA TAAGCACCC TAAATAAT GAGTGCTTA TTTTAATAATATTAT TERM 2377 1972800 - 1972777 - T 81 -8.2 -4.39407 | opp_overlap 1972777 1972779, overlap 1972794 GTAAACAATGCAAAA TAGACACTGC ATTA ACAGTGCCTA TCTCTGACATACACA TERM 2378 1972835 - 1972848 + T 71 -8.1 -3.21126 | TAGTTTTATTTTATT TGCGG TTTC CCGCA TTGGTAGCTATACTT CKL_1875 1973172 - 1972888 - | hypothetical protein CKL_1876 1973647 - 1973291 - | hypothetical protein CKL_1877 1974323 - 1973868 - | transcriptional regulator CKL_1878 1974986 - 1974372 - | hypothetical protein CKL_1879 1975211 - 1975011 - | hypothetical protein CKL_1880 1975796 - 1975419 - | hypothetical protein CKL_1881 1976114 - 1975797 - | hypothetical protein TERM 2379 1975847 - 1975829 - G 71 -8.2 -3.3344 | opp_overlap 1975828 1975826 1975825 ATTTAACGCTTACAA CCAAAGGA TCA TCCTTTAG ATGCTTTCTAGTATA TERM 2380 1976227 - 1976251 + r 91 -10 -4.3295 | overlap 1976218 1976223 1976229 CATAATTAATCCTTA TGCCGGGGAT TATTT ATCCCCGGTG TTTAGTTTTATTACA TERM 2381 1976229 - 1976249 + r 100 -12.6 -3.7519 | overlap 1976218 1976227 1976223 TAATTAATCCTTATG CCGGGGAT TATTT ATCCCCGG TGTTTAGTTTTATTA CKL_1882 1976589 - 1976278 - | hypothetical protein CKL_1883 1976918 - 1976598 - | hypothetical protein CKL_1884 1977708 - 1977226 - | hypothetical protein CKL_1885 1978117 - 1977701 - | hypothetical protein TERM 2382 1978080 - 1978090 + g 70 -4 -5.11033 | opp_overlap 1978065 TCAAAGGTTATTCCG TCAA CCA TTGA TTTTTTAGCATTATA CKL_1886 1979029 - 1978301 - | hypothetical protein CKL_1887 1979516 - 1979298 - | hypothetical protein CKL_1888 1979917 - 1979513 - | hypothetical protein CKL_1889 1980759 - 1979932 - | hypothetical protein TERM 2383 1980002 - 1979990 - G 72 -9.1 -2.62311 | opp_overlap 1979989 1979988 ATGAGAATTAATTCA GTCCG GAC CGGAC ACTTGTCTCCATCAC CKL_1891 1980992 - 1980825 - | hypothetical protein CKL_1892 1982339 - 1980996 - | replicative DNA helicase TERM 2384 1982198 - 1982208 + g 71 -5.4 -4.60797 | opp_overlap 1982198 1982196 CTAGAGCTTTAAATA TCAC CTT GTGA TTTTCTCTGTAAAAA CKL_1893 1983281 - 1982343 - | hypothetical protein TERM 2385 1982709 - 1982731 + g 73 -7.8 -3.69685 | overlap 1982709 TAAAGCGTTATTATC GAGAGAGAGA TCT TTTTTCTCTC TTCTCTCTCTCTTAT TERM 2386 1982880 - 1982894 + g 74 -2.1 -5.63236 | GTTTTTTGGCTCTTC CAGTA ACTCC TGCTG TTTTTCTTTTTCCCT CKL_1894 1984116 - 1983322 - | hypothetical protein CKL_1895 1985009 - 1984116 - | Phage-related rekombinase protein CKL_1901 1985188 - 1985012 - | hypothetical protein CKL_1902 1985430 - 1985191 - | hypothetical protein TERM 2387 1985599 - 1985616 + r 82 -5.5 -5.50313 | overlap 1985600 GAAGTTTTAATTTTG TGCCCTT TGGC GAGGGCG TTTTTTACTTTTCTG CKL_1903 1985857 - 1985621 - | hypothetical protein CKL_1904 1986404 - 1986003 - | hypothetical protein CKL_1905 1986744 - 1986580 - | hypothetical protein CKL_1906 1987140 - 1986889 - | hypothetical protein CKL_1907 1987590 - 1987168 - | hypothetical protein CKL_1908 1987944 - 1987750 - | hypothetical protein CKL_1909 1988277 - 1988077 - | hypothetical protein CKL_1910 1989077 - 1988274 - | prophage antirepressor CKL_1911 1989571 - 1989098 - | hypothetical protein TERM 2388 1990343 - 1990327 - H 77 -9.5 -2.88839 | opp_overlap 1990305, overlap 1990326 ATTGTCAAATATAAT GTGAACT TAT AGTTCAC TGTAAATACAAAAAA CKL_1912 1990466 - 1990768 + | hypothetical protein CKL_1913 1990787 - 1991065 + | hypothetical protein TERM 2389 1991148 - 1991138 - f 71 -2.6 -5.41746 | opp_overlap 1991146 AATTGGGTAAAAAAA TAAA GTC TTTA AAATTTAATTCATTG TERM 2390 1991419 - 1991460 + F 84 -11.1 -2.56475 | overlap 1991418 TGTCAATACTTTTTA CGTGAAAAAAAGTTACACT ATAA AATGTTGCTTTTTTTCACG ATTGATATAAAATTA TERM 2391 1992009 - 1991995 - g 84 -3.6 -5.79595 | overlap 1991997 GTTGAAAATAAAAAA TCTTTC ATG GAAAAA ATTGAAGACCTAAGT CKL_1914 1991494 - 1992135 + | hypothetical protein TERM 2392 1992239 - 1992213 - f 88 -10.3 -3.70139 | opp_overlap 1992211, overlap 1992211 TAAGTTTAATAAATA GGCAAAAGATA TTATT TATCCTTTGCC GGTACTATTGTAATA TERM 2393 1992581 - 1992566 - g 79 -2.6 -5.73339 | ATAATTATAAAAAAA TCTACA AATA TATAGA ACATATTGATGGATC TERM 2394 1992610 - 1992583 - g 70 -7.2 -3.74615 | gap 1 TACAAATATATAGAA CATATTGATGGAT CTA ACCC-TCAATATG AAACACATATTATAA TERM 2395 1992986 - 1992968 - g 82 -7.6 -4.64464 | opp_overlap 1992971 TAAATGAAAGTAAAA GAATAATT CCC AATTATTC ATCCCATAATATTAA CKL_1915 1992538 - 1993086 + | hypothetical protein CKL_1916 1993165 - 1993332 + | hypothetical protein CKL_1917 1993353 - 1993532 + | hypothetical protein TERM 2396 1993557 - 1993536 - f 80 -5.2 -5.25735 | opp_overlap 1993536 TCAAAAAACTAAAAA TGCACCTA TTCCAG TAAGTGCA TTTTTAAACTCTAAA TERM 2397 1993632 - 1993655 + F 85 -7 -4.93318 | opp_overlap 1993631 1993636 1993652, overlap 1993636 1993652 ATACCACAATTATAT TAAATTTAAA CTCA TTTAAATTTA TTTTTATAAATTATA TERM 2398 1995180 - 1995170 - g 74 -4 -5.23765 | opp_overlap 1995170 1995176 1995178 GAAATAATAGAAAAA TCAT TGC ATGA ATTTAATTCATCTTT CKL_1918 1993691 - 1995340 + | Phage invertase/recombinase-related protein TERM 2399 1995510 - 1995489 - g 91 -8.1 -5.04868 | opp_overlap 1995494 TGAAAGTAAATAAAA TTAAAGGTG TTTA CACCTCTAA TGGGGAATATGAAGA CKL_1919 1995446 - 1995907 + | hypothetical protein CKL_1920 1995904 - 1996173 + | transcriptional regulator CKL_1921 1996283 - 1996474 + | hypothetical protein TERM 2400 1996473 - 1996488 + F 100 -9 -5.63517 | CGTGGAAAAAGATTT GAGAGC TTTG GCTCTC TTTTTTATTTGAAAA TERM 2401 1996589 - 1996609 + F 88 -6.7 -5.33026 | opp_overlap 1996589 GTTCTAATTGTGAAA GCCCTGGGT TTG GTCCTGGGC TTTTTATTTAAATTA CKL_1922 1996758 - 1997423 + | hypothetical protein CKL_1923 1997429 - 1998574 + | transcription regulator TERM 2402 1998805 - 1998779 - T 91 -6.8 -5.42862 | opp_overlap 1998779 ACACTTTCAAAAAAA TAGTATGATT GGTTGAT AATCATACTA TTTGGAGTGTTGATT TERM 2403 1998779 - 1998805 + T 71 -7.5 -3.67918 | opp_overlap 1998779 ACACTTTCAAAAAAA TAGTATGATTG GTTGA TAATCATACTA TTTGGAGTGTTGATT TERM 2404 1998843 - 1998829 - T 73 -2.9 -5.47218 | opp_overlap 1998829 GTTGATTTAAAAAAA CTAAA CTTAT TTTAG GTTGTGAAAAATTAA TERM 2405 1999060 - 1999031 - T 84 -10.8 -2.53015 | opp_overlap 1999036, overlap 1999036 ATATGTTTTAATCTA TAAAAGCCCTGG AGTTCA CCAGGGCTTTTG CTATGTAAAACAAAG TERM 2406 1999036 - 1999055 + T 95 -10.7 -4.39166 | opp_overlap 1999036 1999031 TTTTAATCTATAAAA GCCCTGG AGTTCA CCAGGGC TTTTGCTATGTAAAA TERM 2407 1999055 - 1999036 - T 100 -10.7 -4.4715 | opp_overlap 1999036, overlap 1999031 TTTTAATCTATAAAA GCCCTGG AGTTCA CCAGGGC TTTTGCTATGTAAAA CKL_1924 1999728 - 1999144 - | hypothetical protein TERM 2408 1999989 - 1999955 - R 76 -4.4 -5.24129 | gap 1, overlap 1999956 1999958 1999960 TTTTGCTATAAAAAA GTACACCCTAGGCCA AATTAA TGACCTAGGGT-TAA AATTATTGAGCTGGT TERM 2409 1999988 - 1999956 - R 73 -7.9 -3.73995 | gap 1, overlap 1999955 1999958 1999960 TTTGCTATAAAAAAG TACACCCTAGGCCA AATTAA TGACCTAGGGT-TA AAATTATTGAGCTGG TERM 2410 1999987 - 1999958 - R 75 -8.6 -3.44801 | overlap 1999956 1999955 1999960 TGCTATAAAAAAGTA CACCCTAGGCCA AATTAA TGACCTAGGGTT AAAATTATTGAGCTG TERM 2411 1999985 - 1999960 - R 93 -11.2 -3.28457 | overlap 1999958 1999956 1999955 CTATAAAAAAGTACA CCCTAGGCCA AATTAA TGACCTAGGG TTAAAATTATTGAGC CKL_1925 2000411 - 1999992 - | hypothetical protein TERM 2412 2000462 - 2000445 - R 73 -5.5 -4.78149 | opp_overlap 2000445, overlap 2000438 TTTATAATCTAAAAA GAGAGCC TTTC AGCTCCC TAATTATTCAAAAAT CKL_1926 2001301 - 2000462 - | Phage-related amidase CKL_1927 2001572 - 2001318 - | hypothetical protein TERM 2413 2001629 - 2001599 - R 91 -10.6 -4.07885 | opp_overlap 2001590 2001604, overlap 2001604 TAGTTTTGTGTAAAA TAAAAGAACCTGGT TAA ACCAAGTTCTTTTG AGTTAGATATTTTTA TERM 2414 2001604 - 2001624 + r 81 -8.3 -4.29176 | opp_overlap 2001599 2001604, overlap 2001590 TTGTGTAAAATAAAA GAACCTGGT TAA ACCAAGTTC TTTTGAGTTAGATAT TERM 2415 2001624 - 2001604 - R 100 -10.5 -5.07652 | opp_overlap 2001604 2001590, overlap 2001599 TTGTGTAAAATAAAA GAACCTGGT TAA ACCAAGTTC TTTTGAGTTAGATAT CKL_1928 2001768 - 2001583 - | hypothetical protein TERM 2416 2001940 - 2001917 - R 87 -8.2 -4.7254 | ATTGGGCATTAAAAA GAGCTCTGGA TTTC TCCAAAACTC TGAATGTGTTATGAC CKL_1929 2002490 - 2002047 - | hypothetical protein TERM 2417 2002100 - 2002082 - G 70 -4.6 -4.77757 | GTTTAAAAATTAAAA TTCCTATA ATG TATTGGAA TACTAAAAATCCACC CKL_1930 2002692 - 2002477 - | transcriptional regulator TERM 2418 2002800 - 2002789 - R 86 -4.4 -5.83211 | opp_overlap 2002789 TAGCAAAATAAAAAA GCTA TCTC TAGC TCCTATTTTGCCTTT CKL_1931 2002979 - 2002824 - | hypothetical protein CKL_1932 2003179 - 2002979 - | hypothetical protein CKL_1933 2006985 - 2003194 - | phage tail fibre protein CKL_1934 2007621 - 2006989 - | XkdU-related protein CKL_1935 2008738 - 2007608 - | XkdT-related protein CKL_1936 2009213 - 2008743 - | XkdS-related protein CKL_1937 2009544 - 2009206 - | hypothetical protein CKL_1938 2010505 - 2009519 - | XkdQ-related protein CKL_1939 2011272 - 2010514 - | hypothetical protein CKL_1940 2012065 - 2011547 - | hypothetical protein TERM 2419 2011995 - 2012027 + g 76 -8.5 -3.39841 | overlap 2011994 2011997 2012019 TGTTCAGTAAATTGG AACTGCTTCTGAGCT GGT ACTTCAGAAGCAGTC GTTTCTTTATTCACA TERM 2420 2011997 - 2012025 + g 85 -11.1 -3.25779 | overlap 2011995 2011994 2012019 TTCAGTAAATTGGAA CTGCTTCTGAGCT GGT ACTTCAGAAGCAG TCGTTTCTTTATTCA CKL_1941 2015812 - 2012072 - | hypothetical protein TERM 2421 2012508 - 2012490 - G 72 -6 -4.42806 | opp_overlap 2012493, overlap 2012478 2012493 CCACCCTTAAACAAA GGAGTGTT AAA AACACTTC CATATCTACTTTTTA CKL_1942 2016752 - 2016012 - | hypothetical protein TERM 2422 2016039 - 2016053 + g 70 -7.2 -3.66356 | opp_overlap 2016039 CACGGTATTACCATA GGTTTT ATT AAAACC TTTAGGATTCACCGT CKL_1943 2017015 - 2016812 - | hypothetical protein CKL_1944 2017543 - 2017118 - | hypothetical protein TERM 2423 2017267 - 2017297 + g 100 -10.5 -5.06585 | overlap 2017264 TTTGATTTAATTCTT CCCGTATAGGAGG TTGGT TCTCCTGTATGGG TTTTTCTCTGATTTC TERM 2424 2017457 - 2017491 + g 86 -5.7 -5.38249 | overlap 2017459 2017460 TATATCTTGACTTTC TAATGGCTGTGCTTG TCCTT CAAGTGCAGCCACTC TTTTTTCTAATTCCT TERM 2425 2017459 - 2017489 + g 83 -8.3 -4.31563 | overlap 2017457 2017460 TATCTTGACTTTCTA ATGGCTGTGCTTG TCCTT CAAGTGCAGCCAC TCTTTTTTCTAATTC TERM 2426 2017460 - 2017488 + g 89 -11.8 -3.17311 | overlap 2017459 2017457 ATCTTGACTTTCTAA TGGCTGTGCTTG TCCTT CAAGTGCAGCCA CTCTTTTTTCTAATT TERM 2427 2017765 - 2017753 - R 80 -6.3 -4.92239 | GCAAAAATTGAAAAA GTTCT TAA AGAAC AGGATTCTAAGAATG TERM 2428 2018166 - 2018144 - R 90 -8.4 -4.78237 | opp_overlap 2018144 2018141 CACCCCATAACAAAA GCACCTGCCA TTA CAGCAAGTGC TTATTTATGTTCTAT CKL_1945 2018601 - 2018182 - | hypothetical protein CKL_1946 2018888 - 2018700 - | hypothetical protein TERM 2429 2018948 - 2018969 + H 71 -4.5 -4.86731 | gap 1 GGTTTTGTTCTTGCT TGGTATGTCC ACA GGATAT-CCA TTTTCTTTAAGCCAC TERM 2430 2019526 - 2019554 + H 91 -10.4 -4.02132 | opp_overlap 2019524 CTGCATTATTTAATT TTCGGATGTTTG CTAAA CCAACATCCGAA TTTGTAAATTTAACA TERM 2431 2019818 - 2019850 + H 73 -4.3 -5.17786 | gap 1, opp_overlap 2019818 CTATTTTGAGTTAAA CCCTTTGTT-GAGT CGCCAA ACTGGAACAAAGGG TTTTTAGTTTTCTTC CKL_1947 2020213 - 2020998 + | hypothetical protein TERM 2432 2021004 - 2021028 + T 72 -5 -4.96848 | opp_overlap 2021003 AGACAAATAAACACC CACACTCG CCTTTAAAA CGGGTGTG TTTTTCTATGAAAAA TERM 2433 2021324 - 2021292 - T 77 -6.3 -4.66318 | opp_overlap 2021303, overlap 2021293 ATTATTTCAATAAAA TTTTTGCAATACGCT TCA AGCGTTGTGCAAAAC CCTAGAACAAAATTA TERM 2434 2021323 - 2021293 - T 85 -9.8 -3.39068 | opp_overlap 2021303, overlap 2021292 TTATTTCAATAAAAT TTTTGCAATACGCT TCA AGCGTTGTGCAAAA CCCTAGAACAAAATT CKL_1948 2022050 - 2021337 - | hypothetical protein TERM 2435 2021897 - 2021922 + g 78 -9.7 -3.32807 | overlap 2021888 2021891 AATAATTCCTTATAG GGGTTTCCTCA ATTT TGTGGAGACCC TTAATAATATTTTCA TERM 2436 2022155 - 2022188 + r 90 -8.4 -4.70659 | opp_overlap 2022158 2022165, overlap 2022158 2022165 ACGTTCTTTGCCCCA AAATAAAAAACACC CCAAAA GGTGTTTTTTATTA TTTTTGAATATAAAA TERM 2437 2022158 - 2022185 + r 93 -10.1 -4.46215 | opp_overlap 2022158 2022165, overlap 2022155 2022165 TTCTTTGCCCCAAAA TAAAAAACACC CCAAAA GGTGTTTTTTA TTATTTTTGAATATA TERM 2438 2022185 - 2022158 - R 95 -10.8 -4.07568 | opp_overlap 2022158 2022155 2022165, overlap 2022165 TTCTTTGCCCCAAAA TAAAAAACACCC CAAA AGGTGTTTTTTA TTATTTTTGAATATA TERM 2439 2022178 - 2022165 - R 86 -4.5 -5.79595 | opp_overlap 2022165 2022158 2022155, overlap 2022158 CCCCAAAATAAAAAA CACCC CAAA AGGTG TTTTTTATTATTTTT TERM 2440 2022165 - 2022178 + r 84 -3.8 -5.80727 | opp_overlap 2022158 2022165, overlap 2022158 2022155 CCCCAAAATAAAAAA CACC CCAAAA GGTG TTTTTTATTATTTTT TERM 2441 2022223 - 2022206 - R 89 -6.3 -5.47159 | opp_overlap 2022206 2022201 2022199, overlap 2022199 TTTGAATATAAAAAA GAACCAC ATGA GTGATTC TTTTATTACTATTAT CKL_1949 2023084 - 2022248 - | hypothetical protein CKL_1950 2023830 - 2023375 - | hypothetical protein TERM 2442 2023893 - 2023874 - R 78 -5.7 -4.98917 | opp_overlap 2023874, overlap 2023869 TAAAACATAAGAAAA GAACCGC ATTTAA GCGATTC TTTTAAAATTATTAA CKL_1951 2024310 - 2023912 - | hypothetical protein CKL_1952 2024538 - 2024356 - | hypothetical protein CKL_1953 2025031 - 2024615 - | hypothetical protein CKL_1954 2026468 - 2025050 - | hypothetical protein TERM 2443 2025250 - 2025261 + g 78 -5.8 -4.85129 | opp_overlap 2025250 2025249, overlap 2025243 2025256 2025258 CTTTCTGCCCTAAAT CTCC ATTA GGAG TTTTTCCTATATAGT CKL_1955 2026904 - 2026470 - | hypothetical protein CKL_1956 2027735 - 2026908 - | hypothetical protein TERM 2444 2026943 - 2026959 + g 71 -2.3 -5.49569 | opp_overlap 2026927, overlap 2026929 CCCTGCCATAGATTT TATTCAT GAC AGGAATA TTTTTTCTCTTGATA CKL_1957 2028173 - 2027739 - | hypothetical protein CKL_1958 2028532 - 2028149 - | hypothetical protein TERM 2445 2028204 - 2028215 + g 81 -4.4 -5.40004 | TCTCCATTTATTATC TGTG GATA CACA TTTTTTACTTTCATA CKL_1959 2028858 - 2028529 - | hypothetical protein TERM 2446 2028906 - 2028878 - R 72 -6.1 -4.26076 | TCACCTCCATGAAAA TAGAGTCCATTTA AAA TTAATGAACCCTA TCCTAAAGTTATTTC CKL_1960 2029938 - 2028904 - | hypothetical protein CKL_1961 2030331 - 2029954 - | hypothetical protein CKL_1962 2031827 - 2030352 - | hypothetical protein CKL_1963 2031964 - 2031848 - | hypothetical protein CKL_1964 2032392 - 2031976 - | hypothetical protein TERM 2447 2032426 - 2032450 + r 71 -7.2 -3.71924 | opp_overlap 2032426, overlap 2032439 TTAAGCACAATAAAA GCACCTACTA TTTTT TAGTAAGTGC TTATTAAATAATTTC TERM 2448 2032450 - 2032426 - R 100 -9.4 -4.84492 | opp_overlap 2032426 2032439 TTAAGCACAATAAAA GCACCTACTA TTTTT TAGTAAGTGC TTATTAAATAATTTC CKL_1965 2032678 - 2032454 - | hypothetical protein CKL_1966 2034015 - 2032684 - | hypothetical protein CKL_1967 2035528 - 2034008 - | hypothetical protein TERM 2449 2034558 - 2034548 - G 70 -4 -4.94147 | AACAATACAATAAAA TAAG AGG CTTA ACAGTACCTTTGCAT TERM 2450 2035024 - 2035038 + g 76 -6.4 -4.65838 | TGCCCTCTATGTCCT GCCATT CCT GATGGC TTTTTAAAATATATG CKL_1968 2036790 - 2035519 - | hypothetical protein CKL_1969 2037562 - 2036780 - | hypothetical protein TERM 2451 2037372 - 2037403 + g 76 -5.2 -5.09221 | CCCTTTTTTCGTTTA GTTGCGCAACTA TTCCCGTT TGATTGCGCAAC TTTATTTTTATTGTC TERM 2452 2037632 - 2037614 - R 75 -7.4 -4.24342 | opp_overlap 2037614 TGGGGGATGAAGAAA GAGCCC TGTTGGG GGGCTC TTTGAATACTATAAA TERM 2453 2037614 - 2037632 + r 76 -8.1 -3.70149 | opp_overlap 2037614 TGGGGGATGAAGAAA GAGCCCT GTTGG GGGGCTC TTTGAATACTATAAA CKL_1970 2039623 - 2037641 - | hypothetical protein CKL_1971 2039717 - 2039968 + | hypothetical protein TERM 2454 2040222 - 2040203 - f 90 -9.3 -4.50976 | opp_overlap 2040202 2040200 TTCTATATCAGAAAA GGAGAGG TATTCG CCTCTCC CTGGTTTGTCTTTAT CKL_1972 2040535 - 2040825 + | hypothetical protein TERM 2455 2040903 - 2040878 - T 80 -5.5 -5.33785 | opp_overlap 2040878 AATCATTATAAAAAA TAAGCACCC TAAATAAT GAGTGCTTA TTTTAATAATATTAT TERM 2456 2041133 - 2041110 - T 81 -8.2 -4.39407 | opp_overlap 2041110 2041112, overlap 2041127 GTAAACAATGCAAAA TAGACACTGC ATTA ACAGTGCCTA TCTCTGACATACACA TERM 2457 2041168 - 2041181 + T 71 -8.1 -3.21126 | TAGTTTTATTTTATT TGCGG TTTC CCGCA TTGGTAGCTATACTT CKL_1973 2041505 - 2041221 - | hypothetical protein CKL_1974 2041980 - 2041624 - | transcriptional regulator CKL_1975 2042656 - 2042201 - | hypothetical protein CKL_1976 2043319 - 2042705 - | hypothetical protein CKL_1977 2043544 - 2043344 - | hypothetical protein CKL_1978 2044129 - 2043752 - | hypothetical protein CKL_1979 2044447 - 2044130 - | hypothetical protein TERM 2458 2044180 - 2044162 - G 71 -8.2 -3.3344 | opp_overlap 2044161 2044159 2044158 ATTTAACGCTTACAA CCAAAGGA TCA TCCTTTAG ATGCTTTCTAGTATA TERM 2459 2044560 - 2044584 + r 91 -10 -4.3295 | overlap 2044551 2044556 2044562 CATAATTAATCCTTA TGCCGGGGAT TATTT ATCCCCGGTG TTTAGTTTTATTACA TERM 2460 2044562 - 2044582 + r 100 -12.6 -3.7519 | overlap 2044551 2044560 2044556 TAATTAATCCTTATG CCGGGGAT TATTT ATCCCCGG TGTTTAGTTTTATTA CKL_1980 2044922 - 2044611 - | hypothetical protein CKL_1981 2045251 - 2044931 - | hypothetical protein CKL_1982 2046041 - 2045559 - | hypothetical protein CKL_1983 2046450 - 2046034 - | hypothetical protein TERM 2461 2046413 - 2046423 + g 70 -4 -5.11033 | opp_overlap 2046398 TCAAAGGTTATTCCG TCAA CCA TTGA TTTTTTAGCATTATA CKL_1984 2047362 - 2046634 - | hypothetical protein CKL_1985 2047849 - 2047631 - | hypothetical protein CKL_1986 2048250 - 2047846 - | hypothetical protein CKL_1987 2049092 - 2048265 - | DNA methylase TERM 2462 2048335 - 2048323 - G 72 -9.1 -2.62311 | opp_overlap 2048322 2048321 ATGAGAATTAATTCA GTCCG GAC CGGAC ACTTGTCTCCATCAC CKL_1988 2049325 - 2049158 - | hypothetical protein CKL_1989 2050672 - 2049329 - | replicative DNA helicase TERM 2463 2050531 - 2050541 + g 71 -5.4 -4.60797 | opp_overlap 2050531 2050529 CTAGAGCTTTAAATA TCAC CTT GTGA TTTTCTCTGTAAAAA CKL_1990 2051614 - 2050676 - | hypothetical protein TERM 2464 2051042 - 2051064 + g 73 -7.8 -3.69685 | overlap 2051042 TAAAGCGTTATTATC GAGAGAGAGA TCT TTTTTCTCTC TTCTCTCTCTCTTAT TERM 2465 2051213 - 2051227 + g 74 -2.1 -5.63236 | GTTTTTTGGCTCTTC CAGTA ACTCC TGCTG TTTTTCTTTTTCCCT CKL_1991 2052449 - 2051655 - | hypothetical protein CKL_1992 2053342 - 2052449 - | Phage-related rekombinase protein CKL_1993 2053521 - 2053345 - | hypothetical protein CKL_1994 2053763 - 2053524 - | hypothetical protein TERM 2466 2053932 - 2053949 + r 82 -5.5 -5.50313 | overlap 2053933 GAAGTTTTAATTTTG TGCCCTT TGGC GAGGGCG TTTTTTACTTTTCTG CKL_1995 2054190 - 2053954 - | hypothetical protein CKL_1996 2054334 - 2054194 - | hypothetical protein CKL_1997 2054737 - 2054336 - | hypothetical protein CKL_1998 2055077 - 2054913 - | hypothetical protein CKL_1999 2055225 - 2055040 - | hypothetical protein CKL_2000 2055473 - 2055222 - | hypothetical protein CKL_2001 2055923 - 2055501 - | hypothetical protein CKL_2002 2056082 - 2055930 - | hypothetical protein CKL_2003 2056295 - 2056083 - | hypothetical protein CKL_2004 2056462 - 2056292 - | hypothetical protein CKL_2005 2056989 - 2056474 - | transcriptional regulator TERM 2467 2056519 - 2056543 + g 71 -8.1 -3.33509 | overlap 2056525 2056538 CTTTTCTTTCTGAAC TTTAAACATTT CCT GAATGTTTAAA TTAAATTCTTTACAC CKL_2006 2057333 - 2057091 - | transcriptional regulator CKL_2007 2057519 - 2057839 + | hypothetical protein CKL_2008 2057846 - 2058025 + | hypothetical protein CKL_2009 2058146 - 2058009 - | hypothetical protein CKL_2010 2058331 - 2058146 - | hypothetical protein CKL_2011 2058456 - 2058632 + | hypothetical protein TERM 2468 2058652 - 2058674 + T 85 -10 -3.3941 | opp_overlap 2058655 TACCTTTAGCTTTAA GGATTGGATT TAA AATCTAATCC TTGGTTGGCTGTCCT TERM 2469 2058677 - 2058717 + T 70 -6.9 -3.90574 | overlap 2058709 TAAAATCTAATCCTT GGTTGGCTGTCCTTGAA CTTGCTC TTCAAGTGCAGCTACCC TTTGCTGTAGTTCTT CKL_2012 2058972 - 2058757 - | hypothetical protein CKL_2013 2059154 - 2059456 + | hypothetical protein CKL_2014 2059476 - 2059742 + | hypothetical protein CKL_2015 2060013 - 2059759 - | hypothetical protein TERM 2470 2059825 - 2059815 - G 72 -2.6 -5.41746 | opp_overlap 2059823 AATTGGGTAAAAAAA TAAA GTC TTTA AAATTTAATTCATTG TERM 2471 2060096 - 2060137 + H 84 -11.1 -2.56475 | overlap 2060095 TGTCAATACTTTTTA CGTGAAAAAAAGTTACACT ATAA AATGTTGCTTTTTTTCACG ATTGATATAAAATTA TERM 2472 2060686 - 2060672 - g 84 -3.6 -5.79595 | overlap 2060674 GTTGAAAATAAAAAA TCTTTC ATG GAAAAA ATTGAAGACCTAAGT CKL_2016 2060171 - 2060812 + | hypothetical protein CKL_2017 2060905 - 2061207 + | hypothetical protein TERM 2473 2062494 - 2062480 - g 70 -4.2 -5.09685 | opp_overlap 2062480 2062482 TAATAGAGAGAAAAA TACCCG CGC CGGCTA TGTATACATAATCTC CKL_2018 2061236 - 2062870 + | hypothetical protein TERM 2474 2062926 - 2062905 - f 73 -4.4 -5.10665 | opp_overlap 2062905 ATTTAATAAATAAAA GAGCCTAT TTTTTT AAAGGCTC ATTTGTATCCGTAAA CKL_2019 2063122 - 2063691 + | hypothetical protein CKL_2020 2063884 - 2063723 - | hypothetical protein TERM 2475 2064185 - 2064162 - g 100 -9 -5.48213 | TACTTAAAAGAAAAA GCTATTCTTA AATA TAAGAACAGC TCTAAAGTTGGCGAT CKL_2021 2064069 - 2064254 + | hypothetical protein TERM 2476 2064285 - 2064251 - f 80 -5.2 -5.30575 | opp_overlap 2064279, overlap 2064252 TAAAAACTCAAAAAA CTAAAAATGCACCC TTCGACT AAGTGCATTTTTAA ACGCTAAAAATAGTT CKL_2022 2064412 - 2064684 + | hypothetical protein TERM 2477 2065620 - 2065608 - gf 73 -7.7 -3.60792 | opp_overlap 2065608 CCCTCAATCCCGAAA GCGAA CGA TTCGC TTCTGTAAGCAATAT TERM 2478 2065608 - 2065620 + GF 71 -7.7 -3.49102 | opp_overlap 2065608 CCCTCAATCCCGAAA GCGAA CGA TTCGC TTCTGTAAGCAATAT CKL_2023 2064743 - 2066482 + | recombinase-related protein CKL_2024 2066457 - 2066942 + | hypothetical protein TERM 2479 2066950 - 2066983 + T 89 -7.8 -5.17054 | gap 1, opp_overlap 2066949 TAATTTAAAGGTAAG GTACTTAGATTTGAT TTTAC AT-AAATCTAAGTAC TTTTTTACATCTTAT CKL_2025 2067973 - 2067017 - | nitrilase CKL_2026 2068407 - 2068102 - | hypothetical protein TERM 2480 2068773 - 2068801 + H 73 -7.7 -3.70553 | AGAATCATCTTTACT TTTTAAAAGCA ATTCACA TGCTTTTAAAA TTCTATATTCCATTA CKL_2027 2068821 - 2069174 + | hypothetical protein CKL_2028 2069281 - 2069517 + | hypothetical protein TERM 2481 2069558 - 2069519 - f 78 -10.2 -2.62513 | opp_overlap 2069524, overlap 2069518 2069515 2069527 ATCTCAAAAAATGAT TTATAGCACATGGATAAT TTTT ACTATCCATGTGCTTTTA TAATGAAATTTTTTA TERM 2482 2069524 - 2069553 + F 100 -12.3 -4.47328 | opp_overlap 2069519 2069518 2069515 2069527 AAAAAATGATTTATA GCACATGGATAAT TTTT ACTATCCATGTGC TTTTATAATGAAATT TERM 2483 2069550 - 2069527 - f 73 -9 -2.66008 | opp_overlap 2069524, overlap 2069519 2069518 2069515 AAATGATTTATAGCA CATGGATAAT TTTT ACTATCCATG TGCTTTTATAATGAA TERM 2484 2070284 - 2070260 - g 81 -4.4 -5.4659 | overlap 2070264 GAATATAAATAAAAA TGTA-CTGCTGG TTT CC-GCAGATACA AAAAATTTCACAGGA CKL_2029 2069649 - 2070602 + | hypothetical protein CKL_2030 2071368 - 2070664 - | hypothetical protein TERM 2485 2071147 - 2071133 - G 90 -10 -4.03978 | overlap 2071121 AATTCTTTATACAAA GGCACT GCC AGTGCC ACTGTAGCAGGATAT TERM 2486 2071183 - 2071171 - G 93 -4.9 -6.0427 | AGGATATAAAAAAAA TGATA TTA TATCA CCTCCAATATTAAAA TERM 2487 2071199 - 2071219 + g 77 -9.9 -2.76696 | opp_overlap 2071199, overlap 2071198 CCTCCAATATTAAAA CTTTCATAT TTT ATATGAAAG CTTGTTAAAAAAAAC TERM 2488 2071219 - 2071199 - G 93 -9.9 -4.4261 | opp_overlap 2071199 2071198 CCTCCAATATTAAAA CTTTCATAT TTT ATATGAAAG CTTGTTAAAAAAAAC TERM 2489 2071262 - 2071234 - G 79 -2.6 -5.75342 | gap 1 GCTTGTTAAAAAAAA CATTATTAA-AGC TATT GCAATTAATAATG GATTAAAAATAGAAA CKL_2031 2071714 - 2071361 - | hypothetical protein TERM 2490 2071963 - 2071996 + r 84 -9.7 -3.57462 | opp_overlap 2071968, overlap 2071968 CATACTAAATATAGT AAAAACCTGCACTGT AACT ATGGTGCAGGTTTTA TTTAAACATAAACTA TERM 2491 2071991 - 2071968 - R 75 -5.3 -4.90217 | opp_overlap 2071968 2071963 TAAATATAGTAAAAA CCTGCAC TGTAACTATG GTGCAGG TTTTATTTAAACATA TERM 2492 2071968 - 2071991 + r 100 -9.6 -4.87803 | opp_overlap 2071968, overlap 2071963 TAAATATAGTAAAAA CCTGCACTGT AACT ATGGTGCAGG TTTTATTTAAACATA rbr1 2072596 - 2072012 - | Rbr1 CKL_2033 2073147 - 2073899 + | hypothetical protein TERM 2493 2073952 - 2073906 - f 78 -7 -4.5081 | gap 1, opp_overlap 2073915, overlap 2073910 2073915 AAAGACTGAAAGAAA TTGATTAAAGTTAGGCATAAA TTAAGT TTTATACCTAACTTTTA-CAA TCTGAAAATCACATT TERM 2494 2073949 - 2073910 - f 74 -8.9 -2.80991 | opp_overlap 2073915, overlap 2073906 2073915 ACTGAAAGAAATTGA TTAAAGTTAGGCATAAA TTAAGT TTTATACCTAACTTTTA CAATCTGAAAATCAC TERM 2495 2073944 - 2073915 - f 78 -8.8 -3.83771 | opp_overlap 2073915, overlap 2073910 2073906 AAGAAATTGATTAAA GTTAGGCATAAA TTAAGT TTTATACCTAAC TTTTACAATCTGAAA TERM 2496 2073915 - 2073944 + F 72 -6.6 -4.16943 | opp_overlap 2073915 2073910 2073906 AAGAAATTGATTAAA GTTAGGCATAAA TTAAGT TTTATACCTAAC TTTTACAATCTGAAA CKL_2034 2074050 - 2074508 + | hypothetical protein TERM 2497 2074625 - 2074649 + F 74 -5.1 -5.01811 | overlap 2074627 TATACCAATAGTATT CTTACATTTTT TAA AAAAGTGTATG TTTTTAATTTAATGA TERM 2498 2074627 - 2074647 + F 70 -6.3 -4.12375 | overlap 2074625 TACCAATAGTATTCT TACATTTTT TAA AAAAGTGTA TGTTTTTAATTTAAT CKL_2035 2075064 - 2075357 + | hypothetical protein TERM 2499 2075437 - 2075399 - T 89 -11.4 -2.95139 | gap 1, opp_overlap 2075399, overlap 2075396 ACCATCTAATAATTA TTTA-GTCACACGTAAA ATATTA TTTACGTGTGACATAAA TTCTAATATCCCTCG TERM 2500 2075399 - 2075437 + T 93 -11.4 -3.47573 | gap 1, opp_overlap 2075396 2075399 ACCATCTAATAATTA TTTA-GTCACACGTAAA ATATTA TTTACGTGTGACATAAA TTCTAATATCCCTCG gerKC3 2076594 - 2075488 - | GerKC3 TERM 2501 2076735 - 2076688 - R 100 -14.4 -2.58663 | opp_overlap 2076694, overlap 2076694 ATTTACTGTCATAAC CAGAAATACCGCAGTATTCAAA TATA TATGAACACTGCGGTATTTTCG ATGGTTTAAGACGCT TERM 2502 2076694 - 2076729 + r 100 -12 -4.26079 | opp_overlap 2076694 2076688 TGTCATAACCAGAAA TACCGCAGTATTCAAA TATA TATGAACACTGCGGTA TTTTCGATGGTTTAA TERM 2503 2076729 - 2076694 - R 100 -14.2 -4.1021 | opp_overlap 2076694, overlap 2076688 TGTCATAACCAGAAA TACCGCAGTATTCAAA TATA TATGAACACTGCGGTA TTTTCGATGGTTTAA CKL_2037 2077427 - 2076786 - | hypothetical protein TERM 2504 2077665 - 2077637 - H 72 -5.9 -4.52873 | opp_overlap 2077638, overlap 2077634 2077638 TTTTTAGAAAAATAA TGAGTCGTATTCC CAT GGAATGCGGCTCT TTTAGCACCTTAGCT TERM 2505 2077664 - 2077638 - H 79 -9.4 -3.31001 | opp_overlap 2077638, overlap 2077637 2077634 TTTTAGAAAAATAAT GAGTCGTATTCC CAT GGAATGCGGCTC TTTTAGCACCTTAGC TERM 2506 2077638 - 2077664 + H 100 -13.8 -4.11484 | opp_overlap 2077638 2077637 2077634 TTTTAGAAAAATAAT GAGTCGTATTCC CAT GGAATGCGGCTC TTTTAGCACCTTAGC CKL_2038 2077699 - 2078331 + | hypothetical protein TERM 2507 2078368 - 2078337 - T 100 -13.9 -3.10112 | opp_overlap 2078334 2078366, overlap 2078340 ATCTAATTGAGCTAA CAAGGCTAATAGC TCTAAG GCCATTAGCCTTG AAATTAAATTTTAAA TERM 2508 2078365 - 2078340 - T 86 -9.8 -3.69283 | opp_overlap 2078334, overlap 2078337 TAATTGAGCTAACAA GGCTAATAGC TCTAAG GCCATTAGCC TTGAAATTAAATTTT CKL_2039 2080084 - 2078372 - | methyl-accepting chemotaxis protein TERM 2509 2079889 - 2079899 + g 70 -4 -5.00923 | overlap 2079895 AAATATCACTTTTAA TTTC AGT GAAA TTTTGTTTCATATTT CKL_2040 2081648 - 2080200 - | amino acid ABC transporter permease TERM 2510 2081739 - 2081724 - R 83 -4.7 -5.63645 | opp_overlap 2081724, overlap 2081717 CCAAAATATAAAAAA TGGGT ACCTAA ACCCA TTTTATAGAAATACA CKL_2041 2082729 - 2081827 - | transporter protein CKL_2042 2083858 - 2082812 - | methyl-accepting chemotaxis protein TERM 2511 2084163 - 2084105 - H 86 -10.1 -3.57648 | gap 1, opp_overlap 2084103 2084106 2084110 2084124, overlap 2084103 2084107 2084124 TAATTTAAAAAGATA CAGGATTCCTGAATTTAAACTTAATTTA CACA CAAATTAAGTTTAAAAACAGAAATCCT- ATAAATTACGGCATT TERM 2512 2084162 - 2084107 - H 100 -15.2 -3.34527 | opp_overlap 2084103 2084106 2084110 2084124, overlap 2084103 2084105 2084124 ATTTAAAAAGATACA GGATTCCTGAATTTAAACTTAATTTA CACA CAAATTAAGTTTAAAAACAGAAATCC TATAAATTACGGCAT TERM 2513 2085167 - 2085177 + G 71 -6.8 -4.13014 | CTTATAGGTATGTCA GCCA AGG TGGC TTTTCCAGATGTAAG CKL_2043 2084318 - 2085739 + | symporter protein TERM 2514 2085825 - 2085784 - T 86 -9.1 -4.18908 | gap 1, opp_overlap 2085786, overlap 2085770 2085786 2085798 ACATTGTTAAAACAA CATTGGACAGAAAATATATT TTT AATACATTT-CTGTCCAATT TTTATTCTATTAATT TERM 2515 2085786 - 2085823 + T 100 -9.5 -5.29716 | gap 1, opp_overlap 2085770 2085784 2085786 2085798 ATTGTTAAAACAACA TTGGACAGAAAATATATT TTT AATACATTT-CTGTCCAA TTTTTATTCTATTAA TERM 2516 2085823 - 2085786 - T 95 -11.7 -3.68836 | gap 1, opp_overlap 2085786, overlap 2085770 2085784 2085798 ATTGTTAAAACAACA TTGGACAGAAAATATATT TTT AATACATTT-CTGTCCAA TTTTTATTCTATTAA CKL_2044 2086797 - 2085835 - | methyl-accepting chemotaxis protein TERM 2517 2086514 - 2086524 + g 70 -4 -5.10767 | opp_overlap 2086514 GATTCTTTAATGGAA CTTT TAA AAAG TTTTTCTATTAAATC CKL_2045 2087846 - 2086812 - | hypothetical protein TERM 2518 2087494 - 2087482 - G 75 -2.7 -5.54907 | TCTATAAAATAAAAA GTACT TAA AATAC TTTCTTCAATTCCCT TERM 2519 2089261 - 2089245 - g 74 -3.8 -5.15381 | AACAGAGGCAAAAAA TAGATT GGATG AATCTA TGGCTAAGAAGGAGG CKL_2046 2088034 - 2089377 + | hypothetical protein CKL_2047 2090185 - 2089478 - | hypothetical protein CKL_2048 2090481 - 2090233 - | hypothetical protein CKL_2049 2090666 - 2090487 - | hypothetical protein CKL_2050 2090979 - 2090803 - | hypothetical protein CKL_2051 2091453 - 2091040 - | hypothetical protein TERM 2520 2091336 - 2091362 + g 74 -6 -4.61852 | ACCTTTCAGCAGCTC CATATATAAGAG GAT CTTTAATATATG TTTCTTTATCATATT CKL_2052 2091884 - 2091459 - | nucleotidyltransferase TERM 2521 2091715 - 2091733 + g 74 -3.9 -5.14965 | gap 1, opp_overlap 2091701 2091715 2091716 TCTCCCCTTATATAA GC-CTCTT CTAT AAGAGAGC TTTTTTCCTCAAAAT TERM 2522 2092099 - 2092053 - R 70 -7.7 -3.40102 | gap 1, opp_overlap 2092064, overlap 2092064 ATTTAAAAGTAAAAT TAATAAAAAAAGATGGCAGC TGCAATAT ACTGCCATCT-TCTTTATTA CAAATTTGTTTTTTC TERM 2523 2092064 - 2092089 + r 70 -6.2 -4.20768 | opp_overlap 2092053 2092064 AAATTAATAAAAAAA GATGGCAG CTGCAATATA CTGCCATC TTCTTTATTACAAAT TERM 2524 2092089 - 2092064 - R 100 -6.9 -5.9003 | opp_overlap 2092064, overlap 2092053 AAATTAATAAAAAAA GATGGCAGC TGCAATAT ACTGCCATC TTCTTTATTACAAAT CKL_2053 2092444 - 2092097 - | hypothetical protein CKL_2054 2094356 - 2092437 - | hypothetical protein TERM 2525 2092820 - 2092838 + g 78 -6.8 -4.46835 | opp_overlap 2092820 TAACAGCTCCAACAA TTATCATG ACC CATGGTAA TTTATTTGACATTAT TERM 2526 2093182 - 2093162 - G 74 -7.7 -3.78556 | overlap 2093165 ATAACAATGTAACAA TAACTATAG AAG CTATAGTCA TACCAGATACAGGAA TERM 2527 2093179 - 2093165 - G 74 -7.2 -4.00097 | overlap 2093162 ACAATGTAACAATAA CTATAG AAG CTATAG TCATACCAGATACAG TERM 2528 2094004 - 2093992 - G 70 -4.1 -4.93661 | ACACCAACAACAAAA CCTTC TAA GAAAG AAACTTTTGAACCTA TERM 2529 2094547 - 2094528 - R 82 -4.3 -5.66989 | opp_overlap 2094528, overlap 2094530 TAAACACTAAAAAAA TACGAGA ACTGAA TCTCGCA TTCCATTTATCTACC CKL_2055 2095504 - 2094578 - | hypothetical protein CKL_2056 2096315 - 2095539 - | hypothetical protein TERM 2530 2095681 - 2095697 + g 72 -3.5 -5.20216 | opp_overlap 2095681 CATTCTAATAAAATA GCTCCTG TAT CTGGTGC TTTTTTAATGATCTC TERM 2531 2096203 - 2096176 - G 83 -10.6 -3.254 | opp_overlap 2096174 2096177, overlap 2096174 2096177 TAGGCATTGACAATA TTGCCTGGTACC ATAG GGTACCAGACAT GTTCAATATATAAAA TERM 2532 2096202 - 2096177 - G 100 -14.1 -2.54919 | opp_overlap 2096174 2096177, overlap 2096176 2096174 AGGCATTGACAATAT TGCCTGGTACC ATAG GGTACCAGACA TGTTCAATATATAAA TERM 2533 2096177 - 2096202 + g 89 -11.9 -3.14125 | opp_overlap 2096177 2096176 2096174, overlap 2096174 AGGCATTGACAATAT TGCCTGGTACC ATAG GGTACCAGACA TGTTCAATATATAAA CKL_2057 2097520 - 2096315 - | hypothetical protein TERM 2534 2096802 - 2096814 + g 79 -2.7 -5.88061 | CCAAATTCTAATATT TTGTG AAA TACAA TTTTTTTAGTTTTTT CKL_2058 2097801 - 2097517 - | hypothetical protein CKL_2059 2098301 - 2097801 - | hypothetical protein TERM 2535 2098124 - 2098135 + g 70 -4.4 -4.89339 | TAGGCAAATTTATTA TAGG TTCA CCTA TTTTTATAGCTCCTT CKL_2060 2099570 - 2098323 - | hypothetical protein CKL_2061 2099776 - 2099453 - | hypothetical protein CKL_2062 2100171 - 2099800 - | hypothetical protein CKL_2063 2101174 - 2100185 - | hypothetical protein CKL_2064 2102466 - 2101186 - | 4-aminobutyrate aminotransferase TERM 2536 2101955 - 2101945 - G 75 -8.2 -3.72576 | opp_overlap 2101940 2101938 TTGCTTTTCATCAAA GCCC TTT GGGC ATAGATCTTTAGAGG CKL_2065 2103648 - 2102494 - | hypothetical protein CKL_2066 2104380 - 2103670 - | hypothetical protein CKL_2067 2105176 - 2104415 - | hypothetical protein CKL_2068 2106068 - 2105202 - | hypothetical protein TERM 2537 2105423 - 2105411 - G 76 -3.3 -5.4505 | opp_overlap 2105411 GTTCTGAACAAAAAA GATCC ATT GGTTC TTTTTCCATAATGTC CKL_2069 2106886 - 2106119 - | hypothetical protein TERM 2538 2106907 - 2106928 + H 84 -8.9 -3.96681 | TCCTCCTTGCCGCAA TTGGTATTA CCGG TAATACCAA TTATTAATTTATTAA TERM 2539 2107071 - 2107061 - H 82 -5.4 -5.4659 | TAATATAAACAAAAA GCTT CAC AAGC AAATTCAATCTGAAA CKL_2070 2107467 - 2108180 + | hypothetical protein CKL_2071 2110235 - 2108565 - | hypothetical protein TERM 2540 2110404 - 2110383 - R 75 -3.7 -5.38321 | AAAGACGACAAAAAA GAACATCCA CTTC TGACTGTTC TTACAATAATATACA CKL_2072 2110738 - 2110475 - | hypothetical protein CKL_2073 2110980 - 2110723 - | hypothetical protein TERM 2541 2111054 - 2111064 + r 71 -2.6 -5.43414 | TAATATTTTATATAT TAAT TAA ATTA TTTTTTATCTATACT CKL_2074 2111803 - 2111411 - | hypothetical protein CKL_2075 2112089 - 2111775 - | hypothetical protein CKL_2076 2112739 - 2112311 - | hypothetical protein CKL_2077 2113151 - 2112732 - | hypothetical protein TERM 2542 2112968 - 2112985 + g 76 -3.5 -5.34655 | ATTCTTCCATAATCA TTATTAC ATCA GTAGTAA TTTTATTTTTACTTA CKL_2078 2113441 - 2113133 - | hypothetical protein TERM 2543 2113978 - 2113965 - g 79 -2.5 -5.81412 | TCCAGCCAAAAAAAA TATAT CCAT ATATA AAAATTGGACAGTTG TERM 2544 2114762 - 2114725 - g 73 -9.3 -2.95068 | opp_overlap 2114723, overlap 2114717 2114728 GAAGATATTCATATA TCACTTCCACCTAAAGA ATAT TCTTTAGATGGAATAGA AATTGATAATGAACC TERM 2545 2114759 - 2114728 - g 74 -9.6 -2.70826 | opp_overlap 2114723, overlap 2114725 2114717 GATATTCATATATCA CTTCCACCTAAAGA ATAT TCTTTAGATGGAAT AGAAATTGATAATGA CKL_2079 2113831 - 2116128 + | hypothetical protein CKL_2080 2116230 - 2117339 + | hypothetical protein TERM 2546 2117343 - 2117376 + F 88 -10.4 -3.36175 | opp_overlap 2117345 2117347, overlap 2117345 2117347 GATTATAAATAAAAA AATACTAGGGACCT TGGGAC AGGTCCCTAGTGTG TTATGCCCCTTTGTT TERM 2547 2117345 - 2117374 + F 100 -13 -3.24161 | opp_overlap 2117345 2117347, overlap 2117343 2117347 TTATAAATAAAAAAA TACTAGGGACCT TGGGAC AGGTCCCTAGTG TGTTATGCCCCTTTG TERM 2548 2117374 - 2117345 - f 100 -10.8 -6.02919 | opp_overlap 2117343 2117345 2117347, overlap 2117347 TTATAAATAAAAAAA TACTAGGGACCT TGGGAC AGGTCCCTAGTG TGTTATGCCCCTTTG TERM 2549 2117347 - 2117372 + F 100 -13.4 -3.1789 | opp_overlap 2117347 2117345, overlap 2117345 2117343 ATAAATAAAAAAATA CTAGGGACCT TGGGAC AGGTCCCTAG TGTGTTATGCCCCTT TERM 2550 2117372 - 2117347 - f 100 -13.4 -4.6372 | opp_overlap 2117345 2117343 2117347, overlap 2117345 ATAAATAAAAAAATA CTAGGGACCT TGGGAC AGGTCCCTAG TGTGTTATGCCCCTT CKL_2081 2117506 - 2117967 + | hypothetical protein CKL_2082 2118007 - 2118723 + | hypothetical protein TERM 2551 2118746 - 2118728 - T 93 -12.4 -2.62292 | opp_overlap 2118741 AAGGAGCATAATCCA CCAGGGAC TCT GTCCCCGG ACCCCTGAGGTTTAT TERM 2552 2118812 - 2118791 - T 72 -5.9 -4.48221 | opp_overlap 2118791 CAGGAACGGATAAAA CGGATAG TTTTCATC CTATCCG TTCCTGCATAGAACA CKL_2083 2119837 - 2119046 - | hypothetical protein CKL_2084 2120283 - 2120107 - | hypothetical protein CKL_2085 2120699 - 2120319 - | hypothetical protein CKL_2086 2120878 - 2120714 - | hypothetical protein CKL_2087 2121355 - 2122416 + | hypothetical protein TERM 2553 2122458 - 2122479 + T 75 -5.9 -4.74215 | opp_overlap 2122458, overlap 2122453 TAGATACTGTAAAAA CGGATAG GATTAAAA CTATCCG TTTTATTCATGCTCT TERM 2554 2122479 - 2122458 - T 75 -5.9 -4.65838 | opp_overlap 2122458 2122453 TAGATACTGTAAAAA CGGATAG GATTAAAA CTATCCG TTTTATTCATGCTCT CKL_2088 2123536 - 2122529 - | nucleoside-diphosphate-sugar epimerase CKL_2089 2123688 - 2123960 + | hypothetical protein TERM 2555 2124394 - 2124428 + F 75 -7.9 -3.99985 | opp_overlap 2124394 GTCGGCATTAGGGAA CGTACCTAGGATTGT GTAAA ACAAATCAAGGTACG TTATTTAAATGTATG CKL_2090 2124506 - 2124853 + | transposase CKL_2091 2124834 - 2125499 + | transposase CKL_2092 2125631 - 2125723 + | hypothetical protein TERM 2556 2125866 - 2125828 - T 82 -6.3 -5.02074 | opp_overlap 2125858, overlap 2125834 TTATTCCCTAAAAAA TAAAAATTACTATAGAA ACGTA TCCCATAGTAATTTCCA ATTAGCTTTTATCAT TERM 2557 2125860 - 2125834 - T 93 -5.3 -5.75538 | opp_overlap 2125858, overlap 2125828 CCTAAAAAATAAAAA TTACTATAGAA ACGTA TCCCATAGTAA TTTCCAATTAGCTTT TERM 2558 2125909 - 2125955 + T 71 -8.1 -3.24206 | overlap 2125895 2125899 2125908 2125905 TTACACATACCTGTG TATGTTCTCTCGCATTAGCAT TTTTT ATGCTAATGCGACAGCCCCTA TCTATGTTATTATTT CKL_2093 2126128 - 2125889 - | hypothetical protein CKL_2094 2126501 - 2126154 - | hypothetical protein TERM 2559 2126533 - 2126566 + r 71 -4.1 -5.04597 | opp_overlap 2126535, overlap 2126541 GTAAATTTACTATAT TATTTATCGTATAAA ACAA TTTATACTTTAAATA TTTTTATCTATCCAT CKL_2095 2127345 - 2126560 - | hypothetical protein CKL_2096 2127615 - 2127355 - | hypothetical protein CKL_2097 2128698 - 2127682 - | polysaccharide biosynthesis protein capI 2130078 - 2129122 - | CapI TERM 2560 2129623 - 2129593 - G 72 -4.7 -4.79955 | overlap 2129588 2129596 2129598 ATATGTAGAACAAAA TAATTCTGCAGCT CTTTT AGCCGCAGCATAA GGAGAAATTTGCAGT TERM 2561 2129620 - 2129596 - G 74 -6.4 -4.49377 | overlap 2129588 2129593 2129598 TGTAGAACAAAATAA TTCTGCAGCT CTTTT AGCCGCAGCA TAAGGAGAAATTTGC TERM 2562 2129618 - 2129598 - G 71 -9 -2.5604 | overlap 2129588 2129596 2129593 TAGAACAAAATAATT CTGCAGCT CTTTT AGCCGCAG CATAAGGAGAAATTT rkpK 2131409 - 2130075 - | RkpK TERM 2563 2131016 - 2131033 + g 79 -9.9 -2.90309 | CTTTTACTTTTTTCC CTGTTCC CACA GGAACAG TACTCTTGTTTACGA CKL_2100 2133672 - 2131429 - | Alpha-amylase-related protein TERM 2564 2131627 - 2131637 + g 86 -4 -5.73339 | TAAAGAATTATCTCT TTGT ATT ACAA TTTTTTTATCATTAT TERM 2565 2132901 - 2132918 + g 83 -4.3 -5.69379 | CAAATTTATCGTGGT TATTTAA AAAC TTAAATA TTTTTTTGATTCTAT CKL_2101 2134917 - 2133712 - | hypothetical protein TERM 2566 2134941 - 2134965 + r 87 -11.5 -2.64318 | opp_overlap 2134926 2134941, overlap 2134938 2134964 CCTCTCTTTCTAAAA TAGGCAAGTGA ACC TCACCTGCCTA TAAATTATATACTAT TERM 2567 2134965 - 2134941 - R 100 -13.7 -4.07568 | opp_overlap 2134941 2134938 2134964, overlap 2134926 CCTCTCTTTCTAAAA TAGGCAAGTGA ACC TCACCTGCCTA TAAATTATATACTAT fabG2 2135737 - 2134985 - | FabG2 ilvB2 2137463 - 2135754 - | IlvB2 TERM 2568 2136309 - 2136319 + g 70 -4 -4.94168 | AGCCTTTCCATTGGT TAAG TTA CTTA TTTCTTTTATTATGT CKL_2104 2138472 - 2137495 - | hypothetical protein CKL_2105 2139708 - 2138476 - | methyltransferase TERM 2569 2139776 - 2139790 + r 71 -4.4 -4.83169 | opp_overlap 2139776 2139778 TTGGATTTTTACATA TATAAT TTT ATTATA TTTTTATCAGGAAAT CKL_2106 2140926 - 2139769 - | hypothetical protein TERM 2570 2140106 - 2140124 + g 80 -6.2 -4.76274 | TCTCTTATATAAGTT TTAATAAT TTC ATTATTAA TTTTATATTCATTTA CKL_2107 2141814 - 2140963 - | methyltransferase CKL_2108 2143551 - 2141815 - | polysaccharide biosynthesis protein TERM 2571 2143493 - 2143472 - G 74 -8.9 -3.04263 | opp_overlap 2143455, overlap 2143455 2143474 ATTTTATGGCCAATA TACCTAAAA TGCT TTTTAGGTA GCCTTGTAGATGTGC CKL_2109 2144586 - 2143579 - | polysaccharide biosynthesis protein CKL_2110 2146384 - 2144603 - | hypothetical protein TERM 2572 2146486 - 2146457 - R 100 -15.3 -5.27335 | opp_overlap 2146455 2146452 2146478 TTCTTTAAATAAAAA TAGAGCTTATAGA AAAT TCTATAAGCTCTA AATAGCTTATTATCT CKL_2111 2147326 - 2146496 - | flagellin, subunit protein B CKL_2112 2147778 - 2147434 - | hypothetical protein fliD 2150284 - 2147807 - | hypothetical protein TERM 2573 2149995 - 2149972 - G 100 -11.8 -3.89614 | TGTAATTTCCAGAAA CTGCATCTGC CCCT GCAGATACAG TAATGCCATTTGTAT fliS 2150715 - 2150326 - | hypothetical protein TERM 2574 2150806 - 2150788 - R 74 -9 -2.84173 | overlap 2150790 ATATAACCTATTATA GATTTTTC ACA GAAAAATC ATCCTAAAATTGTGA CKL_2115 2151145 - 2150843 - | hypothetical protein TERM 2575 2151235 - 2151217 - R 74 -9 -2.80622 | overlap 2151219 ATATAGCCTATTATA GATTTTTC ATA GAAAAATC ATCCTAAAATTTTGA flaG 2151671 - 2151318 - | hypothetical protein CKL_2117 2151913 - 2151692 - | hypothetical protein CKL_2118 2152344 - 2151907 - | flagellar assembly protein FliW flgL 2153804 - 2152374 - | FlgL CKL_2120 2154213 - 2153860 - | hypothetical protein TERM 2576 2154344 - 2154326 - R 76 -9 -3.00565 | overlap 2154328 AATTACATAATTATA GATTTTTC ATA GAAAAATC CTCCTAAACTGTGAA flgK 2156272 - 2154374 - | hypothetical protein TERM 2577 2155531 - 2155521 - G 71 -6.8 -4.05788 | opp_overlap 2155521 2155520 2155517, overlap 2155517 CCCTCTGAAATCAAA GGTG CCG CACC ATTGTCATCTGCATC TERM 2578 2155919 - 2155904 - G 71 -3.2 -5.30155 | CCAGGAATTAAAAAA CTCACT CATA AGAGAG GATATACCACTGTCT TERM 2579 2156349 - 2156331 - R 78 -9 -3.17763 | TTCACAGTTGAGGAA GATTTTTC GTA GAAAAATC CATAATTTAATTTTT CKL_2122 2156814 - 2156407 - | hypothetical protein flgM 2157114 - 2156842 - | hypothetical protein TERM 2580 2157316 - 2157299 - R 80 -7.7 -4.58236 | opp_overlap 2157299 TATAAAAGATTAAAA GCAGAGA ATTA CCTCTGC TTAAATTAAGATCCG fliN 2158517 - 2157339 - | flagellar motor switch protein TERM 2581 2158038 - 2158026 - G 74 -7.7 -3.86015 | TATTTCCCTCATAAA CATGG TTG CCATG GAAGTGGCTGCAGAC fliM 2159505 - 2158510 - | hypothetical protein cheW2 2159969 - 2159568 - | hypothetical protein CKL_2127 2160551 - 2160189 - | hypothetical protein cheC 2161182 - 2160586 - | hypothetical protein cheA2 2163272 - 2161194 - | hypothetical protein cheR 2164052 - 2163285 - | hypothetical protein cheB2 2165173 - 2164058 - | hypothetical protein TERM 2582 2164195 - 2164208 + g 81 -2.3 -6.02546 | CCTCATCTTGCGATA TGGTG ATAC CTCCA TTTTTTTTAATTTCC cheD 2165684 - 2165196 - | chemoreceptor glutamine deamidase CheD cheW3 2166156 - 2165710 - | hypothetical protein CKL_2134 2168201 - 2166249 - | hypothetical protein ilvE2 2169046 - 2168213 - | IlvE2 TERM 2583 2168690 - 2168678 - G 70 -4.1 -5.00616 | TTCCCCGTGAAAAAA GATAG TAT CTACC CCTGTTTTATAATAT TERM 2584 2169232 - 2169262 + H 85 -7.2 -4.84529 | opp_overlap 2169225 2169242, overlap 2169255 ATTTAAAATACACTC TATGTAAAAATATA AAT TATATTTTTAAATA TTTTTAAATTTATGA CKL_2136 2169309 - 2169950 + | hydrolase TERM 2585 2169951 - 2169989 + T 80 -8.3 -4.21676 | opp_overlap 2169951 2169956 2169958, overlap 2169956 2169987 CTAAAATGGAGATAA TAAAAGGCTGCAAACAA CAATA TTGTCTGCAGTCTTTGA TTTTAGATCAGTTAT TERM 2586 2169989 - 2169951 - T 80 -9 -3.59984 | opp_overlap 2169951 2169956 2169987, overlap 2169956 2169958 CTAAAATGGAGATAA TAAAAGGCTGCAAACAAC AAT ATTGTCTGCAGTCTTTGA TTTTAGATCAGTTAT TERM 2587 2169956 - 2169984 + T 80 -8.2 -4.21922 | opp_overlap 2169951 2169956 2169958, overlap 2169951 ATGGAGATAATAAAA GGCTGCAAACAA CAATA TTGTCTGCAGTC TTTGATTTTAGATCA TERM 2588 2169984 - 2169956 - T 95 -8.9 -4.84914 | opp_overlap 2169956 2169951, overlap 2169951 2169958 ATGGAGATAATAAAA GGCTGCAAACAAC AAT ATTGTCTGCAGTC TTTGATTTTAGATCA TERM 2589 2169982 - 2169958 - T 78 -10.1 -2.69195 | opp_overlap 2169956 2169951, overlap 2169956 2169951 GGAGATAATAAAAGG CTGCAAACAAC AAT ATTGTCTGCAG TCTTTGATTTTAGAT CKL_2137 2170363 - 2170016 - | hypothetical protein TERM 2590 2170550 - 2170530 - R 100 -11.9 -5.22039 | opp_overlap 2170530 TTTAAATTTAAAAAA TGCCGGACT ATA AGTCCAGCA TTTTTTTATATATTA TERM 2591 2170530 - 2170550 + r 100 -9.7 -5.80248 | opp_overlap 2170530 TTTAAATTTAAAAAA TGCCGGACT ATA AGTCCAGCA TTTTTTTATATATTA CKL_2138 2174072 - 2170563 - | pyruvate-flavodoxin oxidoreductase TERM 2592 2173072 - 2173082 + g 74 -5.4 -4.87592 | opp_overlap 2173060, overlap 2173060 AAAGGTTCTCCTGTT GAAC CTG GTTC TTTTGTTCTGTCTAG murG1 2175409 - 2174348 - | N-acetylglucosaminyl transferase recJ 2177547 - 2175760 - | hypothetical protein CKL_2141 2178826 - 2177591 - | zinc protease CKL_2142 2179446 - 2178886 - | hypothetical protein TERM 2593 2178996 - 2178980 - G 70 -6.5 -4.21933 | opp_overlap 2178980 2178989 TTAAGGGCAAAATAA GGTGCTG TAG CAGGACC TCTGCTCGTTATTAA TERM 2594 2179133 - 2179149 + g 77 -8 -3.90186 | opp_overlap 2179128 2179125, overlap 2179132 TTTAAAACTATAGGT GCTGCA CATAT TGCAGC TATTATTTTATTTTC gyrA2 2182324 - 2179463 - | DNA topoisomerase IV subunit A TERM 2595 2182404 - 2182381 - R 71 -8.3 -3.14963 | opp_overlap 2182381 2182378 TTCACAATTATTGAA GTTTTTCAG GTCATA CTGAAAAAC TGATTAAATTTATTT TERM 2596 2182417 - 2182434 + r 70 -8.5 -2.68356 | opp_overlap 2182417, overlap 2182416 2182424 AACTGATTAAATTTA TTTTGCC TGAA GGCAAAA CTTCATTAATTGTGA TERM 2597 2182434 - 2182417 - R 70 -8.5 -2.68546 | opp_overlap 2182417 2182416 2182424 AACTGATTAAATTTA TTTTGCC TGAA GGCAAAA CTTCATTAATTGTGA gyrB2 2184453 - 2182504 - | DNA topoisomerase IV subunit B TERM 2598 2184518 - 2184494 - R 75 -3.6 -5.4505 | TGTTCTAAGAAAAAA TACCCTCTAT TTGTT AAAGAAGGTA TGCAACTTTAAAATT CKL_2145 2185806 - 2184565 - | two component sensor kinase TERM 2599 2185377 - 2185395 + gr 71 -3.2 -5.19261 | CAGTATCTGTCATAC TTTTTAAC GGA GATAAAAA TTTTTTACTGGCTTT CKL_2146 2186422 - 2185736 - | transcriptional regulator TERM 2600 2185773 - 2185784 + g 71 -3 -5.16151 | CCCAATCCACGAATG GTAT ATAT ATAC TTTTTGTTGAATTTA TERM 2601 2186024 - 2186041 + gr 72 -5.7 -4.38637 | TTGCAGACTACCTGC GTTAATA ATAT TATTAAC TTTTACATTATTATT TERM 2602 2186541 - 2186509 - R 80 -10 -2.81936 | gap 1 ATACTATAAAATTTA GAGCCTGCTTTATGA AAAA TCACAA-GCAGGCCC CGGTTTAGGCATTAT CKL_2147 2187007 - 2186546 - | hypothetical protein TERM 2603 2188557 - 2188569 + G 76 -6.3 -4.56775 | opp_overlap 2188556 2188557 TGGTGTAAGTGAAAC TTCTC TTA GAGAA TTTTTAGGAGGCAGT CKL_2148 2187316 - 2189196 + | hypothetical protein CKL_2149 2189216 - 2189389 + | hypothetical protein CKL_2150 2189313 - 2189465 + | hypothetical protein CKL_2151 2189462 - 2189653 + | hypothetical protein CKL_2152 2189634 - 2189963 + | hypothetical protein TERM 2604 2189969 - 2190011 + T 89 -10.2 -3.82191 | opp_overlap 2189968 2189965 2189969, overlap 2189979 GAGCGTATAAATAAT GGGAACTGTATAAAAG GTTTATTTATA TTTTTATACAGTTCCC TTATTATCAAATTAC TERM 2605 2190011 - 2189969 - T 78 -9.5 -3.04244 | opp_overlap 2189969 2189979, overlap 2189968 2189965 GAGCGTATAAATAAT GGGAACTGTATAAAA GGTTTATTTATAT TTTTATACAGTTCCC TTATTATCAAATTAC CKL_2153 2190294 - 2190067 - | hypothetical protein CKL_2154 2192349 - 2190310 - | hypothetical protein TERM 2606 2191539 - 2191529 - G 87 -5.4 -5.52986 | opp_overlap 2191529 ATTCTATCAAAAAAA CCTA TTT TAGG TTCCCTTGTTTTACC TERM 2607 2192070 - 2192060 - G 71 -5.4 -4.59342 | GCCAGCATAAACAAA CTTC GCT GAAG TTGAGAAGCATCTGC CKL_2155 2192615 - 2192346 - | hypothetical protein TERM 2608 2192712 - 2192656 - R 100 -17.2 -4.11664 | gap 1, opp_overlap 2192668, overlap 2192663 2192665 2192668 CTCAGAACAATTAAA CTATAGATATAATAGCAGTTAGTTAGA GCAT TCTAACTAACTGCTATTATA-CTACAT AAAAAATACATTTTC TERM 2609 2192706 - 2192663 - R 100 -23 -3.08298 | opp_overlap 2192668, overlap 2192656 2192665 2192668 CAATTAAACTATAGA TATAATAGCAGTTAGTTAGA GCAT TCTAACTAACTGCTATTATA CTACATAAAAAATAC TERM 2610 2192704 - 2192665 - R 100 -21.2 -3.08746 | opp_overlap 2192668, overlap 2192663 2192656 2192668 ATTAAACTATAGATA TAATAGCAGTTAGTTAGA GCAT TCTAACTAACTGCTATTA TACTACATAAAAAAT TERM 2611 2192701 - 2192668 - R 100 -18.5 -3.6733 | opp_overlap 2192668, overlap 2192665 2192663 2192656 AAACTATAGATATAA TAGCAGTTAGTTAGA GCAT TCTAACTAACTGCTA TTATACTACATAAAA TERM 2612 2192668 - 2192701 + r 100 -18.5 -3.4252 | opp_overlap 2192668 2192665 2192663 2192656 AAACTATAGATATAA TAGCAGTTAGTTAGA GCAT TCTAACTAACTGCTA TTATACTACATAAAA CKL_2156 2193713 - 2192763 - | transcriptional regulator TERM 2613 2193626 - 2193640 + g 72 -5 -4.86773 | opp_overlap 2193626 GACCTTTTCCATAAT CCATGT GAT ATATGG TTTTTGCTCCTTTTC leuB 2194819 - 2193755 - | hypothetical protein TERM 2614 2194141 - 2194153 + g 72 -9.1 -2.71119 | opp_overlap 2194141, overlap 2194140 CCGGATTTTTAATAA GCTGC ATG GCAGC ATTATCTACATACAT TERM 2615 2194153 - 2194141 - G 80 -9.1 -3.63515 | opp_overlap 2194140 2194141 CCGGATTTTTAATAA GCTGC ATG GCAGC ATTATCTACATACAT TERM 2616 2194654 - 2194666 + g 71 -7.7 -3.50111 | overlap 2194652 2194658 2194659 AAATCTTTATAGTCT CCTCT GGA AGAGG TGTTCCTTTTTCATC leuD 2195310 - 2194816 - | hypothetical protein leuC 2196574 - 2195312 - | 3-isopropylmalate dehydratase large subunit TERM 2617 2195888 - 2195900 + g 76 -6.3 -4.68994 | overlap 2195875 AGTTTTTTCATCTAC TGGAA AAA TTCCA TTTTTAGCTCCTGCT leuA2 2198165 - 2196621 - | LeuA2 TERM 2618 2198230 - 2198203 - R 100 -10 -5.63645 | opp_overlap 2198207 TCAAAATATAAAAAA CAGACTTCTC CATGGGGC GAGAAGTCTG TCGCGGTGCCACCCA TERM 2619 2198510 - 2198484 - R 100 -9.5 -5.19879 | TTTTAAATATAAAAA CAGACCTCTCA TGGGG CGAGAAGTCTG TCGCGGTACCACCCA CKL_2161 2200540 - 2198753 - | hypothetical protein TERM 2620 2200629 - 2200683 + r 75 -7.5 -4.00683 | gap 1, opp_overlap 2200634 2200643 TGTGTATAATCACAA TATAATGTTATAAACCCCTCCATATA TTCC TGTATG-AGGGGTTTATAACAAAAAA TTTCCTTGCATTTTT TERM 2621 2200678 - 2200634 - R 100 -14 -3.80597 | gap 1, opp_overlap 2200629, overlap 2200643 ATAATCACAATATAA TGTTATAAACCCCTCCATATA TTCC TGTAT-GAGGGGTTTATAACA AAAAATTTCCTTGCA CKL_2162 2201063 - 2200728 - | hypothetical protein TERM 2622 2200772 - 2200790 + g 77 -3.1 -5.67967 | overlap 2200776 TTATATTTATTACAG GTTCTTC ATAGG GATGAAC TTTTTTTATGGTACT CKL_2163 2201951 - 2201082 - | hypothetical protein CKL_2164 2202659 - 2202045 - | hypothetical protein CKL_2165 2203260 - 2202832 - | flavodoxin TERM 2623 2203370 - 2203427 + r 71 -7.3 -3.7319 | opp_overlap 2203352 2203381, overlap 2203381 ACATAAAATATTTCA TATAACAAAAACAGGTCATTAAAAGTA TACA TACTTCTAATGACCTGTTTAAAATATA TTCTCTATTCTAACT TERM 2624 2203381 - 2203416 + r 100 -15 -3.67285 | opp_overlap 2203381, overlap 2203370 TTCATATAACAAAAA CAGGTCATTAAAAGTA TACA TACTTCTAATGACCTG TTTAAAATATATTCT TERM 2625 2203416 - 2203381 - R 100 -17.2 -5.24796 | opp_overlap 2203370 2203381 TTCATATAACAAAAA CAGGTCATTAAAAGTA TACA TACTTCTAATGACCTG TTTAAAATATATTCT ribH 2203896 - 2203432 - | hypothetical protein ribAB 2205121 - 2203919 - | RibAB ribE 2205851 - 2205198 - | RibE ribD 2206982 - 2205873 - | hypothetical protein TERM 2626 2207206 - 2207181 - R 100 -16.3 -4.65895 | TTTCTCATGCAAAAA TCCCCCTGAAA ATAC TTTCAGGGGGA TAATAAACACAATAA CKL_2170 2208945 - 2207521 - | hypothetical protein CKL_2171 2210963 - 2209158 - | transport protein, ATPase and permease component TERM 2627 2210386 - 2210376 - G 74 -3.2 -5.5112 | CTTAGTAAGAAAAAA TACC ATA GGCA CTGTAATAAGAGTCA TERM 2628 2210885 - 2210895 + g 75 -2.6 -5.54079 | AAAGTCTAAATAATG TTTT CTT AAAA TTTTTTGGTTTTTCC CKL_2172 2212719 - 2211001 - | transport protein CKL_2173 2212901 - 2213287 + | hypothetical protein TERM 2629 2213291 - 2213343 + T 88 -10.3 -3.63078 | gap 1, opp_overlap 2213296, overlap 2213294 2213296 GGTAAATCTTAACAA ATAA-ATGTAAGGTGAGCATTATT AATTGA AAAAATGCTCACCTTACATCTTAA TTATATAATTCATTT TERM 2630 2213294 - 2213339 + T 100 -13.6 -3.52147 | opp_overlap 2213296, overlap 2213291 2213296 AAATCTTAACAAATA AATGTAAGGTGAGCATTATT AATTGA AAAAATGCTCACCTTACATC TTAATTATATAATTC TERM 2631 2213337 - 2213296 - T 100 -16.2 -4.68209 | opp_overlap 2213294 2213291 2213296 ATCTTAACAAATAAA TGTAAGGTGAGCATTATT AATTGA AAAAATGCTCACCTTACA TCTTAATTATATAAT TERM 2632 2213296 - 2213337 + T 100 -16.2 -3.32424 | opp_overlap 2213296, overlap 2213294 2213291 ATCTTAACAAATAAA TGTAAGGTGAGCATTATT AATTGA AAAAATGCTCACCTTACA TCTTAATTATATAAT CKL_2174 2214158 - 2213358 - | ABC transporter ATP-binding protein CKL_2175 2215186 - 2214134 - | ABC transporter permease TERM 2633 2215003 - 2214985 - G 74 -8.8 -3.29649 | opp_overlap 2214979 AGGGTAGTACATTAA CTGCCTGC ACT GTAGGCAG TGCAAAGTTTTCAAT TERM 2634 2215111 - 2215134 + g 75 -4.7 -5.00138 | CTTTTACTACATCTA TTTTATCAG TGCCCT CTGGTAAAA TTTTTGATTTGGATA CKL_2176 2215752 - 2215231 - | ABC transporter substrate-binding protein CKL_2177 2216020 - 2215724 - | ABC transporter substrate-binding protein TERM 2635 2216208 - 2216187 - R 71 -7.3 -3.70742 | AAAACTGGAATAGAA GCTGCAATT AAAA AATAGCAGC CAAACTTTTAAATCT CKL_2178 2217576 - 2216248 - | O-acetyl-L-homoserine sulfhydrylase-related protein TERM 2636 2216795 - 2216785 - G 74 -6.8 -4.1552 | TATTCTTGTAATAAA CGGA AAA TCCG GAAATACCTCAATAA TERM 2637 2217623 - 2217648 + r 95 -11.9 -3.01001 | opp_overlap 2217623, overlap 2217618 2217646 GATTTTACATAAAAA GGCTGCATCTT TTTA GGGATGCAGCC TCTGGTTTACCAGTG TERM 2638 2217648 - 2217623 - R 100 -10.5 -4.9792 | opp_overlap 2217618 2217623 2217646 GATTTTACATAAAAA GGCTGCATC TTTTTAGG GATGCAGCC TCTGGTTTACCAGTG CKL_2179 2218704 - 2217706 - | hydrolase CKL_2180 2220037 - 2218739 - | O-acetyl-L-homoserine sulfhydrylase-related protein TERM 2639 2220219 - 2220195 - R 100 -8 -6.01187 | opp_overlap 2220195 AATCAAATAAAAAAA CTTTCTACAG AGAAA CTATAGAAAG TTATATTAACTGTTT TERM 2640 2220606 - 2220582 - R 89 -10.1 -3.86015 | opp_overlap 2220580 TAGCGTTCGGATAAA GAGACAGGA TAGTAAT TCCTGTCTC ACATGTTTAACTATT CKL_2181 2222181 - 2220613 - | hypothetical protein TERM 2641 2221456 - 2221477 + g 74 -2.3 -5.66684 | gap 1, opp_overlap 2221451 ATTTCCAAGATGCTT GTCC-CAAGT AAC ACTTACGGAC TTTTTTTCTCCATTA TERM 2642 2222322 - 2222335 + H 74 -2.5 -5.63236 | opp_overlap 2222310 2222316 2222322, overlap 2222310 2222316 AAATAAATTTTATAA TTTAT TATA ATAAA TTTTTATTTTTGAAT TERM 2643 2222915 - 2222929 + G 73 -7.8 -3.65224 | opp_overlap 2222903 AAGCTGTAGAGGCTA CTCTGC AAA GCGGAG TTCTTGAAATCAGAT CKL_2182 2222416 - 2223018 + | heat shock protein TERM 2644 2223074 - 2223120 + T 86 -9.6 -3.78962 | opp_overlap 2223070 2223079, overlap 2223079 TAAAGAAAATTCTAT TAAAATTGGAGCTGTTGGAGTA TTT TTTACCTACAGCTTCAATTTTA TTTGCCTATATTTAC TERM 2645 2223079 - 2223115 + T 72 -5.1 -4.92385 | opp_overlap 2223070 2223079, overlap 2223074 AAAATTCTATTAAAA TTGGAGCTGTTGGAGTA TTT TTTACCTACAGCTTCAA TTTTATTTGCCTATA CKL_2183 2223637 - 2223140 - | acetyltransferase TERM 2646 2223675 - 2223703 + r 100 -10.5 -4.87665 | opp_overlap 2223675 ACTTTCACGGCAAAA TCAACCATTATAA TCT TTACAATGGTTGA TTTTTATACCTAAAA TERM 2647 2223703 - 2223675 - R 100 -12.7 -4.13945 | opp_overlap 2223675 ACTTTCACGGCAAAA TCAACCATTATAA TCT TTACAATGGTTGA TTTTTATACCTAAAA CKL_2184 2224863 - 2223727 - | methionine synthase-related protein CKL_2185 2226144 - 2225026 - | methionine synthase-related protein TERM 2648 2225136 - 2225126 - G 74 -6.8 -4.2349 | TCTGTAGATGCAAAA CCAC ACT GTGG ACTTAAACAGAGCTT CKL_2186 2227093 - 2226161 - | transcriptional regulator TERM 2649 2228475 - 2228462 - g 73 -8.1 -3.56937 | GAAGAGTTAAAGGAA GCTGG AGTT CCAGC AGAATTAATCCGTAT CKL_2187 2227274 - 2228560 + | O-acetyl-L-homoserine sulfhydrylase-related protein TERM 2650 2228694 - 2228667 - T 84 -5.7 -5.28166 | opp_overlap 2228691 TAAAATCAATAAAAA CACAGAAAACT ATTTAA AACTTTCTGTG TTTAACAAACTCATT CKL_2188 2230027 - 2228708 - | hypothetical protein CKL_2189 2230620 - 2230153 - | Fur-related transcriptional regulator TERM 2651 2230728 - 2230748 + H 73 -8.5 -3.13369 | opp_overlap 2230725, overlap 2230731 2230732 ATATTTAAAAATCCT TATTGATAT TGA ATATCAATA TCGTTTATGTTATCA TERM 2652 2230731 - 2230751 + H 78 -7.7 -4.30911 | opp_overlap 2230725, overlap 2230728 2230732 TTTAAAAATCCTTAT TGATATTGA ATA TCAATATCG TTTATGTTATCATTG TERM 2653 2230732 - 2230750 + H 78 -9 -3.17462 | opp_overlap 2230725, overlap 2230728 2230731 TTAAAAATCCTTATT GATATTGA ATA TCAATATC GTTTATGTTATCATT rpsD2 2230807 - 2231400 + | 30S ribosomal protein S4 TERM 2654 2231441 - 2231464 + T 71 -8.2 -3.20455 | opp_overlap 2231441, overlap 2231439 2231438 TCTATTTGGATGATA GCTGGATTCA TATA TAAATCCAGC TGATTTTACTTATGG TERM 2655 2231464 - 2231441 - T 83 -10.4 -2.79183 | opp_overlap 2231441 2231439 2231438 TCTATTTGGATGATA GCTGGATTCA TATA TAAATCCAGC TGATTTTACTTATGG CKL_2191 2232348 - 2231500 - | hydrolase CKL_2192 2233377 - 2232373 - | ABC transporter permease CKL_2193 2234306 - 2233395 - | ABC transporter ATPase CKL_2194 2234772 - 2234356 - | hypothetical protein TERM 2656 2235184 - 2235174 - g 79 -2.6 -5.80951 | AGTTAAAAGAAAAAA TAAA AGA TTTA CAGTTATTGGAAGAA CKL_2195 2234882 - 2235727 + | transcriptional regulator TERM 2657 2235728 - 2235755 + F 74 -5 -5.1523 | opp_overlap 2235730, overlap 2235730 TCTATAGATACCTAA AAGCTTAATTAA CTTT TTAATTAGGCTA TTTTTATCTTCTAAA TERM 2658 2235730 - 2235753 + F 77 -7.6 -4.19621 | opp_overlap 2235730, overlap 2235728 TATAGATACCTAAAA GCTTAATTAA CTTT TTAATTAGGC TATTTTTATCTTCTA CKL_2196 2235858 - 2236709 + | hypothetical protein CKL_2197 2239034 - 2236788 - | hypothetical protein TERM 2659 2239027 - 2239075 + g 100 -14.4 -3.26998 | gap 1, opp_overlap 2239054 TCTCCTCTCTGTACT TTTGACATCTAACAACTTTATTA TATA TAACAA-GTTGTTAGATGTCAAA TTCAGTTACTTTCGT CKL_2198 2239623 - 2239081 - | hypothetical protein CKL_2199 2240248 - 2239742 - | RNA polymerase sigma factor TERM 2660 2240626 - 2240614 - g 81 -4.1 -5.54264 | AAAGATTCAAAAAAA TCACC TAT GGTAA AACAATTATAATGGG dfrD 2240514 - 2240996 + | DfrD TERM 2661 2241069 - 2241101 + T 100 -10.1 -4.65747 | opp_overlap 2241073, overlap 2241073 TACCCAAAAACTTTA TAAAGGTAGAAATTT GAC ACATTTCTACCTTTG TTTTCTTGCAGATTA TERM 2662 2241073 - 2241097 + T 95 -8.7 -4.87892 | opp_overlap 2241073, overlap 2241069 CAAAAACTTTATAAA GGTAGAAATTT GAC ACATTTCTACC TTTGTTTTCTTGCAG TERM 2663 2241097 - 2241073 - T 80 -8.7 -3.99013 | opp_overlap 2241073 2241069 CAAAAACTTTATAAA GGTAGAAATTT GAC ACATTTCTACC TTTGTTTTCTTGCAG CKL_2201 2241835 - 2241173 - | hypothetical protein CKL_2202 2242328 - 2241837 - | hypothetical protein CKL_2203 2242829 - 2242545 - | hypothetical protein thyX 2244238 - 2242835 - | ThyX TERM 2664 2244009 - 2243999 - G 81 -4 -5.52096 | AAATTCAATAAAAAA TTGT TCT ACAA CGGCGGAGACATTAC CKL_2205 2244459 - 2244839 + | hypothetical protein TERM 2665 2244870 - 2244911 + T 100 -14.9 -4.43642 | opp_overlap 2244877 TATAGGCATAGTCTT TTTAAAATATCCTGTTG ATTTTTTA CAACAGGATATTTTAAA TTTGTTAATTATTTT TERM 2666 2244904 - 2244877 - T 81 -8.6 -4.08394 | opp_overlap 2244870 ATAGTCTTTTTAAAA TATCCTGTTG ATTTTTTA CAACAGGATA TTTTAAATTTGTTAA CKL_2206 2245380 - 2244916 - | hypothetical protein CKL_2207 2246237 - 2245362 - | CheY-related protein TERM 2667 2245942 - 2245958 + g 74 -2.2 -5.66989 | opp_overlap 2245942, overlap 2245922 2245919 TGAATGTATCCAGAA GCATGA TTTTT TCTTGC TTTTTTTACTATTTC CKL_2208 2247221 - 2246292 - | 2-dehydropantoate 2-reductase CKL_2209 2248771 - 2247347 - | aldehyde dehydrogenase CKL_2210 2248933 - 2249835 + | transporter protein CKL_2211 2251049 - 2249844 - | permease-related protein htpG 2253205 - 2251331 - | heat shock protein 90 TERM 2668 2253381 - 2253407 + r 80 -6 -5.08255 | overlap 2253402 TTAAATTTATTTTTG TTAGCACTTA TAATACT TGAGTGCTAA TTTTATTTTAGCAAT CKL_2213 2254757 - 2253447 - | hypothetical protein CKL_2214 2255230 - 2254754 - | hypothetical protein TERM 2669 2255424 - 2255409 - R 70 -6.1 -4.24384 | opp_overlap 2255409 AGTATTAAAATTAAA GGAGG TTGCAT CCTCC TTATATAACTTGCCA CKL_2215 2256405 - 2255425 - | alpha-keto acid dehydrogenase CKL_2216 2257125 - 2256487 - | hypothetical protein CKL_2217 2257325 - 2258371 + | hypothetical protein CKL_2218 2258402 - 2259562 + | hypothetical protein TERM 2670 2259946 - 2259960 + G 72 -8.6 -3.16608 | AATAATGCATTATCC TATGGC AGT GCCATA TTAAATACTTTAAAT CKL_2219 2259559 - 2260749 + | hypothetical protein CKL_2220 2261706 - 2260849 - | pyruvate formate-lyase activating enzyme-related protein CKL_2221 2263129 - 2261723 - | hypothetical protein CKL_2222 2263316 - 2263792 + | hypothetical protein CKL_2223 2264423 - 2263800 - | transporter protein TERM 2671 2264552 - 2264589 + r 80 -5.9 -5.16681 | opp_overlap 2264550 2264552 CCAAACACACAAAGA TAGTTGTTAAATC TTAAAATCACTT GATTTAACAACTA TTTTGTTCTTTTTCC CKL_2224 2266046 - 2264580 - | transcriptional regulator CKL_2225 2268336 - 2266147 - | transporter protein TERM 2672 2267493 - 2267522 + g 82 -10.9 -2.54523 | opp_overlap 2267476, overlap 2267476 CAGTACCCTGGTATA CTGTATTTCCTTT ACTT ATAGGAAATACAG TGGGTTGGCCTGTGC CKL_2226 2268684 - 2268364 - | hypothetical protein TERM 2673 2268592 - 2268602 + g 79 -8.2 -4.05069 | TCTTATTATTTTCAT GGCC ATA GGCC TTATATTATTTTTTA CKL_2227 2269049 - 2268792 - | hypothetical protein CKL_2228 2270388 - 2269075 - | hypothetical protein TERM 2674 2269476 - 2269491 + g 72 -2.6 -5.33124 | ATTCATTTGTAACCA GAAAAG CTTC TTTTTC TTTTGTTTTATTATT CKL_2229 2270885 - 2270385 - | hypothetical protein TERM 2675 2271127 - 2271149 + G 73 -8.4 -3.56643 | opp_overlap 2271127 2271130 ACCTTTCTGGGAACA GCAGTTACAG CTA CTGGAGCTGC TTTAACAGCTATGGA CKL_2230 2271085 - 2271276 + | hypothetical protein TERM 2676 2271343 - 2271322 - T 95 -10.9 -4.10188 | opp_overlap 2271320 2271322 GACATTCACAAAGAA GCCTTTGAC TACT GCCAAAGGC TCTTTACAATTTAAT TERM 2677 2271322 - 2271343 + T 75 -8.7 -3.44321 | opp_overlap 2271322, overlap 2271320 GACATTCACAAAGAA GCCTTTGAC TACT GCCAAAGGC TCTTTACAATTTAAT CKL_2231 2272008 - 2271358 - | hypothetical protein TERM 2678 2271519 - 2271533 + g 76 -3.6 -5.40072 | TTTGATTTTGAAGAT TATTGT TAT GCAATA TTTTTTTACCGGAAA TERM 2679 2273277 - 2273263 - g 72 -8.6 -3.09772 | overlap 2273262 TGAAATTGGGAAAAT TGAAGC AAT GCTTCA GAACATAAAATCGGA pacL 2272232 - 2275204 + | PacL TERM 2680 2275301 - 2275252 - T 91 -7.6 -5.26875 | opp_overlap 2275253 2275256 2275258, overlap 2275256 2275258 TTGTTAATTAAAAAA TAAATGCTGCTGTTCAAATA-CTT TTTA AAGATATCTGAACAGCAGTA-TTA TTTTTATAATAATCC TERM 2681 2275253 - 2275301 + T 95 -9.2 -4.93296 | gap 1, opp_overlap 2275252 2275256 2275258, overlap 2275256 2275258 TGTTAATTAAAAAAT AAATGCTGCTGTTCAAATA-CTT TTTA AAGATATCTGAACAGCAGTATTA TTTTTATAATAATCC TERM 2682 2275298 - 2275256 - T 100 -10.9 -5.12785 | gap 1, opp_overlap 2275253 2275256 2275258, overlap 2275252 2275258 TAATTAAAAAATAAA TGCTGCTGTTCAAATA-CTT TTTA AAGATATCTGAACAGCAGTA TTATTTTTATAATAA TERM 2683 2275256 - 2275298 + T 100 -10.9 -4.56153 | gap 1, opp_overlap 2275256 2275252 2275258, overlap 2275253 2275258 TAATTAAAAAATAAA TGCTGCTGTTCAAATA-CTT TTTA AAGATATCTGAACAGCAGTA TTATTTTTATAATAA TERM 2684 2275258 - 2275296 + T 93 -11.3 -3.8772 | gap 1, opp_overlap 2275258 2275256 2275252, overlap 2275256 2275253 ATTAAAAAATAAATG CTGCTGTTCAAATA-CTT TTTA AAGATATCTGAACAGCAG TATTATTTTTATAAT TERM 2685 2275296 - 2275258 - T 100 -13.5 -2.76698 | gap 1, opp_overlap 2275256 2275253 2275258, overlap 2275256 2275252 ATTAAAAAATAAATG CTGCTGTTCAAATA-CTT TTTA AAGATATCTGAACAGCAG TATTATTTTTATAAT CKL_2233 2277372 - 2275324 - | methyl-accepting chemotaxis protein TERM 2686 2277096 - 2277106 + g 74 -4 -5.13344 | TAATTGCAGCATATT TTTG TAC CAAA TTTTTGTATTCATCT TERM 2687 2277534 - 2277552 + H 72 -4.7 -4.88295 | opp_overlap 2277525 2277523 2277518, overlap 2277523 2277521 GATATACTTATGTCA TAAGTAT CTTAT ATACTTA TTTTTCACTTTGTTT TERM 2688 2278018 - 2278007 - g 77 -4.4 -5.23016 | opp_overlap 2278007 AAATAACTGAAAAAA CTTC CATA GAAG ATTATAAGAATTTCA CKL_2234 2277598 - 2279388 + | signal transduction protein CKL_2235 2281261 - 2279402 - | regulatory protein TERM 2689 2279549 - 2279561 + g 74 -9.1 -3.06283 | opp_overlap 2279549, overlap 2279548 GTAGTACCAATAAAA GCCAG CTC CTGGC ATTTCCTTTACCTTT TERM 2690 2279561 - 2279549 - G 90 -9.1 -4.73613 | opp_overlap 2279548 2279549 GTAGTACCAATAAAA GCCAG CTC CTGGC ATTTCCTTTACCTTT TERM 2691 2280270 - 2280285 + g 77 -3.2 -5.63857 | overlap 2280272 CAAATTACAGCTATT GACCAT TTAT ATGGAC TTTTTTTGAATTTTT CKL_2236 2281653 - 2281267 - | transcriptional regulator TERM 2692 2281664 - 2281713 + r 78 -8.1 -3.9009 | gap 1 AACATTTTCCCTCCT TTCGTACTACAGATGTAGTCT-TC AAT GATATATTACACCTGTAGTACGCA TTTGTCAACTACATT TERM 2693 2281776 - 2281750 - R 70 -3 -5.25772 | AAATTACAATAAAAA CCCTATAAGA TTAAACT CCATATAGGG CTTACAATGTTATAT CKL_2237 2283751 - 2281832 - | transcription regulator TERM 2694 2281881 - 2281909 + g 75 -9.7 -2.93219 | opp_overlap 2281885, overlap 2281880 2281883 TCTTCACTATTTGCA GATATTTCTTCAG TAA CAGAGGAAATATC ATTTATAGAGCTATT TERM 2695 2283472 - 2283504 + g 76 -3.5 -5.41143 | opp_overlap 2283475, overlap 2283475 TATAATTTTCAATAT TAACTCTAATAGAAG GTG CTACTATTAAAGATA TTTTTTTCCCCGATG CKL_2238 2284696 - 2283887 - | hypothetical protein CKL_2239 2286113 - 2284686 - | hypothetical protein TERM 2696 2285381 - 2285395 + g 70 -7.2 -3.59653 | overlap 2285379 AATCAAGTACTTTGA GATTTG TAT CAAATC TATTATTTCCTCCAT TERM 2697 2286186 - 2286147 - H 95 -8.8 -5.10154 | ATTTAAAATGAAAAA GGCCAAAACCTTCTTT TTATACTT AAAGAAAGTTTCAGCC TCTAGCTTTCTAGTT TERM 2698 2286429 - 2286470 + H 100 -9.7 -4.7033 | opp_overlap 2286429 2286440, overlap 2286434 TCGTTGACCAGAAAT CTGGAGACCAATAATCTAT TTCT ATGGATTATTGGTCTTTAA TTTTATCTTAAATTA TERM 2699 2286434 - 2286465 + H 100 -14 -4.32571 | opp_overlap 2286429 2286440, overlap 2286429 GACCAGAAATCTGGA GACCAATAATCTAT TTCT ATGGATTATTGGTC TTTAATTTTATCTTA pacS 2286501 - 2288801 + | PacS CKL_2241 2289675 - 2288965 - | efflux pump TERM 2700 2289440 - 2289428 - G 71 -5.5 -4.54821 | ATCTCAACTATAAAA GTGGA AAA CCCAC AGACAATTATTTGAT CKL_2242 2289959 - 2289678 - | efflux pump TERM 2701 2289901 - 2289887 - G 77 -4.2 -5.42131 | CAAGTAGAGAAAAAA TTGCAG GAA CAGCAA ATCTAAAAAGTAATT TERM 2702 2290108 - 2290126 + r 70 -5.4 -4.58085 | opp_overlap 2290091 2290108 TTTATGGCAAAAGCA TAAAAAGC CAT GTTTTTTA TTTATTTATACCTCT CKL_2243 2290560 - 2290243 - | transcriptional regulator CKL_2244 2290858 - 2290553 - | transcriptional regulator CKL_2245 2291191 - 2290997 - | transcriptional regulator CKL_2246 2291465 - 2291247 - | transcriptional regulator TERM 2703 2291526 - 2291497 - R 76 -7.2 -4.42325 | opp_overlap 2291497, overlap 2291494 ATATATAGAAAATAA GGACATATACCT TTTTTT AGGAATATGCCC ATTAGTTAAATATTT CKL_2247 2292389 - 2291541 - | hypothetical protein CKL_2248 2292667 - 2293212 + | hypothetical protein CKL_2249 2293301 - 2293594 + | hypothetical protein TERM 2704 2293619 - 2293603 - f 84 -3.7 -5.88565 | overlap 2293604 GCTATAATAAAAAAA CGCAAAA AAT TTTTGCT TAAACTGAATAAAGA TERM 2705 2293618 - 2293604 - f 75 -7.2 -4.11512 | overlap 2293603 CTATAATAAAAAAAC GCAAAA AAT TTTTGC TTAAACTGAATAAAG TERM 2706 2294495 - 2294477 - g 70 -4.6 -4.78933 | overlap 2294480 2294483 TCAAAATATAGAAAA GAAGTACT GTC AGTACTTG ACAGAGGTATAAACT TERM 2707 2294492 - 2294480 - g 74 -6.3 -4.45187 | overlap 2294477 2294483 AAATATAGAAAAGAA GTACT GTC AGTAC TTGACAGAGGTATAA TERM 2708 2295564 - 2295548 - g 83 -9.5 -3.91197 | opp_overlap 2295562, overlap 2295540 2295562 TCAGAAATCAGTAAA GCCATAT ACA ATATGGC ATCCAATGAAGAAAA TERM 2709 2295654 - 2295632 - g 90 -9.8 -4.16371 | overlap 2295644 TATGAAACAACCAAA GCCGCAGAAA AAG TTGCCGCGGC ATCCCAAACCCAGTC CKL_2250 2294003 - 2295718 + | methyl-accepting chemotaxis protein TERM 2710 2295787 - 2295746 - T 77 -6.2 -4.72846 | gap 2, opp_overlap 2295746 CTACATACTCAAAAA TGCACCTGAAAGTGTTAGTT TTAT ATCTAACA-TTT-AGGTGCA TTTCAATTTAGTATA CKL_2251 2297542 - 2295827 - | methyl-accepting chemotaxis protein TERM 2711 2296310 - 2296328 + g 80 -8.9 -3.72576 | ATGTTCGCCAGCCCT TGCAGCT TCAAT AGCTGCA TTTAGTGCCAGAAGA TERM 2712 2296533 - 2296546 + g 78 -6.7 -4.43877 | TCCAATGAGGATTTT GCAGA TTCT TCTGC TTTATTTGAGAGTTC TERM 2713 2296811 - 2296829 + g 77 -7.5 -4.15328 | AGCTATTAGCCCTAT TTCATCC TTGCT GGATGAA TTTATAGTTTCACTT TERM 2714 2297012 - 2297023 + g 71 -2.2 -5.37043 | AGTATTTTCCATATT GCTG TCTT TAGC TTTTTTATCTACAAT TERM 2715 2297566 - 2297608 + r 100 -15.4 -3.26433 | opp_overlap 2297566 2297569, overlap 2297569 CTCCTAAAATGCAAA CAATTGATATTAATTAATTT TTG ATATTAATTAATATCAATTG TTGATAATGTCCTTA TERM 2716 2297608 - 2297566 - R 100 -15.4 -3.92659 | opp_overlap 2297566 2297569, overlap 2297569 CTCCTAAAATGCAAA CAATTGATATTAATTAATTT TTG ATATTAATTAATATCAATTG TTGATAATGTCCTTA TERM 2717 2297605 - 2297569 - R 95 -11.3 -4.08307 | opp_overlap 2297569 2297566, overlap 2297566 CTAAAATGCAAACAA TTGATATTAATTAATTT TTG ATATTAATTAATATCAA TTGTTGATAATGTCC TERM 2718 2297569 - 2297605 + r 93 -11.3 -3.76482 | opp_overlap 2297566 2297569, overlap 2297566 CTAAAATGCAAACAA TTGATATTAATTAATTT TTG ATATTAATTAATATCAA TTGTTGATAATGTCC TERM 2719 2297767 - 2297805 + r 100 -16.4 -5.04597 | opp_overlap 2297767 CACCACAAATAAAAA CAGCAAACTTTAATATTA AAT TAATTTTAAAGTTTGCTG TTTTTATCTATGGAT TERM 2720 2297805 - 2297767 - R 100 -16.4 -5.40464 | opp_overlap 2297767 CACCACAAATAAAAA CAGCAAACTTTAATATTA AAT TAATTTTAAAGTTTGCTG TTTTTATCTATGGAT ppk 2299984 - 2297834 - | polyphosphate kinase ppx1 2301555 - 2300005 - | hypothetical protein TERM 2721 2301212 - 2301196 - G 100 -7.9 -5.37345 | CTTAAGCATAAAAAA CCGCTCC TCC GCAGCGG TAATAGCCTGTACAT TERM 2722 2301816 - 2301833 + G 72 -7.1 -3.9281 | GCGTTTGGTAATAGC CCATATT CATG AATATGG TTCTTTCAAAATAAT ppx2 2301760 - 2303259 + | Ppx2 CKL_2255 2303328 - 2303936 + | exopolyphosphatase CKL_2256 2305261 - 2304038 - | transporter protein TERM 2723 2305447 - 2305424 - H 80 -4 -5.70829 | AAGATTATAAAAAAA CAAAGTACAT CTAT ATATACTTTA ATAAAAATTAAACAT TERM 2724 2306257 - 2306244 - g 70 -8.1 -3.10939 | overlap 2306242 2306239 AACGGTAAAATTATA GTGGC CTGT GCCAC AAAAATTGAAGAAGG TERM 2725 2306526 - 2306554 + G 71 -7.5 -3.55219 | TTGTGTGGTAGATGT GTAGCAGCATGTA AGG TACATTCTGGTAC TTCTGTAATGCAATT TERM 2726 2307372 - 2307355 - g 74 -8.5 -3.29043 | overlap 2307342 AAGCTGCTCTTAGAA CTGCAAA AGAC TTTGCAG AAAATGTGGATCTTA CKL_2257 2306073 - 2307815 + | Fe-only hydrogenase 1 TERM 2727 2307893 - 2307873 - f 77 -7.7 -4.20918 | opp_overlap 2307872, overlap 2307875 TGTAACTTTAACAAA TACTGATAT TTT ATATCAGCA AATATTATGCCAATA TERM 2728 2307891 - 2307875 - f 74 -8.1 -3.70139 | opp_overlap 2307872, overlap 2307873 TAACTTTAACAAATA CTGATAT TTT ATATCAG CAAATATTATGCCAA TERM 2729 2308033 - 2308005 - f 100 -12.6 -3.54307 | opp_overlap 2308005, overlap 2307979 2308008 AACATTTCCCTCAAA CAACACCGTTGT TTTTT ACAACAGTGTTG TTTTTTCATACGCTT TERM 2730 2308005 - 2308033 + F 100 -10.4 -5.16237 | opp_overlap 2307979 2308005 2308008 AACATTTCCCTCAAA CAACACCGTTGT TTTTT ACAACAGTGTTG TTTTTTCATACGCTT TERM 2731 2308030 - 2308008 - f 80 -8.5 -3.90922 | opp_overlap 2308005, overlap 2307979 2308005 ATTTCCCTCAAACAA CACCGTTGT TTTTT ACAACAGTG TTGTTTTTTCATACG CKL_2258 2308159 - 2308446 + | hypothetical protein CKL_2259 2308485 - 2309426 + | homocysteine methyltransferase CKL_2260 2310726 - 2309503 - | hypothetical protein CKL_2261 2310992 - 2311876 + | permease TERM 2732 2311899 - 2311947 + T 73 -5.4 -4.70046 | gap 1, opp_overlap 2311929, overlap 2311902 2311937 TTCCTCAACAAGCCT GTATCCTACTCCAACCTCTGTAT ATAT ATACTCAGGTTG-AGAAGGATCC TTTTCTAGTTTTCTC CKL_2262 2312579 - 2311881 - | transcriptional regulator CKL_2263 2314560 - 2312569 - | sensory transduction histidine kinase CKL_2264 2316466 - 2314616 - | transporter protein TERM 2733 2317002 - 2317029 + G 83 -9.4 -3.81557 | overlap 2317000 CTTTGTATCTAATTC TATATTTATTGG ACTT CCAGTAAATATA TCTTTATTTGGAACA CKL_2265 2316673 - 2317611 + | hypothetical protein TERM 2734 2319148 - 2319161 + G 71 -6.7 -4.02051 | opp_overlap 2319147 GCAGGGCTGGAAAGC GGTGT TATA ACACC TTATTTCAGTTACTA TERM 2735 2319718 - 2319708 - g 95 -4 -6.25741 | AAATAACAAAAAAAA TATC AGT GATA AGGATATGGATAGTT TERM 2736 2319877 - 2319863 - g 72 -8.6 -3.05561 | overlap 2319853 AGATAGCAAATTATA TTGCCA CAC TGGCAA ATGGAGGGACAAGAT CKL_2266 2317645 - 2320311 + | hypothetical protein TERM 2737 2320318 - 2320348 + T 78 -5.7 -4.95758 | gap 1, opp_overlap 2320318 AATAATTAGATTGAA TACTGCAGAAT-AT TAAT ATAATTCTGTAGTA TTTTTATAATATCAT CKL_2267 2320929 - 2320360 - | arylesterase lpdA 2322747 - 2321017 - | LpdA TERM 2738 2322425 - 2322439 + g 83 -5.7 -5.15682 | TTCTTCTGCTGATTT TCCTG TTTTT CAGGA TTTTGTTTCTCTTTT pdhC 2324130 - 2322796 - | PdhC TERM 2739 2323071 - 2323093 + g 83 -7 -4.77986 | CTGTCATATCATCAG GGCTAAGACT ATT ACTCTTGGCC TTTTTAACTATTTCC TERM 2740 2323312 - 2323336 + g 100 -11.7 -4.80396 | opp_overlap 2323310 2323315 AAAATCGGTATAAGT TAATTTAAAGG TAT CCTTTAAATTA TTTTTAAGTCTTTTA TERM 2741 2323333 - 2323315 - G 77 -9 -3.23452 | opp_overlap 2323312, overlap 2323310 ATCGGTATAAGTTAA TTTAAAGG TAT CCTTTAAA TTATTTTTAAGTCTT pdhB 2325141 - 2324170 - | hypothetical protein pdhA 2326144 - 2325143 - | PdhA TERM 2742 2326347 - 2326297 - R 81 -7.3 -4.66953 | opp_overlap 2326302, overlap 2326302 TCAATATGGGAAAAA TAAAATAGTCCAAATAAACTA TGGATAGAG TAGCTTATTTGAACTATTTTT CTATTTCATTTCAAA TERM 2743 2326342 - 2326302 - R 91 -7.2 -5.27023 | opp_overlap 2326302, overlap 2326297 ATGGGAAAAATAAAA TAGTCCAAATAAACTA TGGATAGAG TAGCTTATTTGAACTA TTTTTCTATTTCATT TERM 2744 2326302 - 2326342 + r 72 -3.5 -5.23644 | opp_overlap 2326297 2326302 ATGGGAAAAATAAAA TAGTCCAAATAAACTAT GGATAGA GTAGCTTATTTGAACTA TTTTTCTATTTCATT CKL_2272 2328318 - 2326348 - | transcriptional regulator TERM 2745 2328445 - 2328413 - R 90 -10.9 -3.64685 | opp_overlap 2328418 2328441, overlap 2328418 AAAATTTGGCAATAA TAAAAGATAGACA CAATAAC TGTCTATCTTTTA TACTAAAATTAATTC TERM 2746 2328440 - 2328418 - R 80 -6.4 -4.89477 | opp_overlap 2328418, overlap 2328413 TTGGCAATAATAAAA GATAGACA CAATAAC TGTCTATC TTTTATACTAAAATT TERM 2747 2328418 - 2328440 + r 74 -6.4 -4.47328 | opp_overlap 2328418 2328413 TTGGCAATAATAAAA GATAGACA CAATAAC TGTCTATC TTTTATACTAAAATT lipA2 2329337 - 2328474 - | lipoyl synthase lipB 2330059 - 2329358 - | hypothetical protein TERM 2748 2330241 - 2330193 - R 80 -5.7 -5.10077 | gap 1, opp_overlap 2330196 2330198, overlap 2330196 AAATATGGGAAAAAA TA-ATACCATAATGGGAACA ATGAAACTGA TATTCCCACTATGGTATATA ATTAAATTCACCCAA TERM 2749 2330237 - 2330196 - R 88 -9 -4.63089 | opp_overlap 2330196 2330198, overlap 2330193 TATGGGAAAAAATAA TACCATAATGGGAACA ATGAAACTGA TATTCCCACTATGGTA TATAATTAAATTCAC CKL_2275 2330489 - 2330268 - | hypothetical protein CKL_2276 2331499 - 2330492 - | hypothetical protein TERM 2750 2331958 - 2331940 - g 70 -7.4 -3.61654 | GATATCTATTGTAAA CTTTGCAC TTC GTGCAATG ACAACTGTTCTCAAT TERM 2751 2332894 - 2332847 - g 85 -8 -4.4017 | gap 1, overlap 2332854 2332863 TCAATTCCTACAAAA GAAAAAAGCTAAATA-ATCGTAG TCC CTACGAAACATTCAGCTTTTATC ATGGAAAAGAAGTTT TERM 2752 2332887 - 2332854 - g 90 -4.7 -5.86976 | gap 1, overlap 2332847 2332863 CTACAAAAGAAAAAA GCTAAATA-ATCGTAG TCC CTACGAAACATTCAGC TTTTATCATGGAAAA TERM 2753 2332877 - 2332863 - g 82 -8.6 -4.12072 | overlap 2332854 2332847 AAAAAAGCTAAATAA TCGTAG TCC CTACGA AACATTCAGCTTTTA CKL_2277 2331721 - 2332980 + | transposase CKL_2278 2333062 - 2333280 + | hypothetical protein TERM 2754 2333504 - 2333518 + G 82 -8.6 -4.08958 | GCCAATACTGCCCCA GTGCTA AAT TAGCAC TTATTCTTTCAAAAT CKL_2279 2333365 - 2333580 + | transcriptional regulator CKL_2280 2333584 - 2333919 + | hypothetical protein TERM 2755 2333964 - 2333979 + F 72 -3.4 -5.35365 | TAATTCCAGCATTCG TATAAA ATAG TTTATA TTTTTGTTATATTTT CKL_2281 2334086 - 2335123 + | polysaccharide deacetylase TERM 2756 2335192 - 2335157 - T 88 -9.2 -4.62069 | opp_overlap 2335157 2335159, overlap 2335128 2335159 TTTTGACGGCAAAAA TAGAAACTCTAACTTA AACT TAAGTTGGAGTTTCTT ATTTTTATATTAACA TERM 2757 2335157 - 2335193 + T 100 -9.8 -5.09762 | gap 1, opp_overlap 2335128 2335157 2335159, overlap 2335159 TTTTGACGGCAAAAA T-AGAAACTCTAACTTA AACT TAAGTTGGAGTTTCTTA TTTTTATATTAACAT TERM 2758 2335159 - 2335190 + T 100 -14 -4.63863 | opp_overlap 2335159 2335157, overlap 2335157 TTGACGGCAAAAATA GAAACTCTAACTTA AACT TAAGTTGGAGTTTC TTATTTTTATATTAA TERM 2759 2335190 - 2335159 - T 100 -11.8 -3.92746 | opp_overlap 2335157 2335159, overlap 2335157 TTGACGGCAAAAATA GAAACTCTAACTTA AACT TAAGTTGGAGTTTC TTATTTTTATATTAA CKL_2282 2336895 - 2335225 - | RNA polymerase sigma factor-related protein TERM 2760 2336991 - 2336975 - H 100 -8.7 -6.47325 | AAAAAACAAAAAAAA TCCCCCT TCT AGGAGGA AAATTTAATAATTAG TERM 2761 2337513 - 2337495 - g 71 -8 -3.27298 | opp_overlap 2337512, overlap 2337510 2337511 CGCCCCAAGGAGGAA GGCCACCC CAA GGAAGGCC ACCTCAGGGCGGAGG CKL_2283 2337164 - 2337556 + | hypothetical protein TERM 2762 2337646 - 2337608 - T 74 -6.2 -4.51363 | gap 1, opp_overlap 2337615, overlap 2337615 TATTAAACATCAAAA TTGAAAACCTAGTAGGA TTTTTT TCCCACTAGG-TTTCTA TTATCATACTTTATT TERM 2763 2337640 - 2337615 - T 91 -9.8 -4.44277 | opp_overlap 2337615, overlap 2337608 CATCAAAATTGAAAA CCTAGTAGGA TTTTTT TCCCACTAGG TTTCTATTATCATAC TERM 2764 2337615 - 2337640 + T 78 -7.6 -4.29304 | opp_overlap 2337615 2337608 CATCAAAATTGAAAA CCTAGTAGGA TTTTTT TCCCACTAGG TTTCTATTATCATAC CKL_2284 2337854 - 2337657 - | small acid-soluble spore protein TERM 2765 2338103 - 2338077 - H 95 -7.5 -5.42259 | opp_overlap 2338077 2338096 GTATTGTTAAAAAAA TAGTATGATTA TTACT CAATCATACTA TTTGGAGTGTGAATT TERM 2766 2338291 - 2338332 + H 86 -8.9 -4.17316 | opp_overlap 2338295, overlap 2338295 ATTTAAATTTTTATT GAAATAGAGGAACTACCAA ATTA TAGATAATTCCTCTATTTC TTGTTTTAACAGCAT TERM 2767 2338328 - 2338295 - H 74 -8.3 -3.66095 | opp_overlap 2338291 2338295 AAATTTTTATTGAAA TAGAGGAACTACCAA ATTA TAGATAATTCCTCTA TTTCTTGTTTTAACA CKL_2285 2338382 - 2338552 + | hypothetical protein TERM 2768 2338566 - 2338589 + T 77 -6.1 -4.77036 | AATTATAAATTAGCA GAGTATAGA TTAATT TCTATGCTC TTTTTAGTCCTACGA TERM 2769 2338624 - 2338669 + T 70 -7.8 -3.51365 | opp_overlap 2338629 2338635, overlap 2338628 GCTTCTATGTGGTAA TAAAAGTAAAACCTATCAGA AAAATC TCTGCTAGGCTTTACCTTTA TTATCTGGAGTGTGA TERM 2770 2338664 - 2338629 - T 100 -10.6 -4.63932 | opp_overlap 2338628 2338624, overlap 2338635 TATGTGGTAATAAAA GTAAAACCTATCAGAA AAAT CTCTGCTAGGCTTTAC CTTTATTATCTGGAG TERM 2771 2338658 - 2338635 - T 75 -6 -4.78029 | opp_overlap 2338628 2338624, overlap 2338629 GTAATAAAAGTAAAA CCTATCAGAA AAAT CTCTGCTAGG CTTTACCTTTATTAT TERM 2772 2339038 - 2339019 - T 95 -12.2 -3.16079 | opp_overlap 2339034 AATATAATCAGGGAA GGAGAGGT GCTA ACCTCTCC AAGGGATAATTACAA TERM 2773 2339212 - 2339178 - T 80 -6.5 -4.86001 | overlap 2339161 2339181 ATTATTTTATAAAAA TAAGATAAGCACTAG TTTTC CCAGTGCCTATCTCC CACATACATATATAT TERM 2774 2339209 - 2339181 - T 93 -10.4 -4.53475 | overlap 2339161 2339178 ATTTTATAAAAATAA GATAAGCACTAG TTTTC CCAGTGCCTATC TCCCACATACATATA CKL_2286 2340204 - 2339332 - | hypothetical protein TERM 2775 2339440 - 2339422 - G 70 -7.4 -3.6053 | TTCCCCATAAATCAA TGCTGCCA GTA TGGAAGCA AATACCGGTTCTAAC CKL_2287 2340461 - 2340240 - | hypothetical protein TERM 2776 2340751 - 2340783 + r 88 -9.2 -4.55128 | opp_overlap 2340773, overlap 2340766 TTTGAAAACTGTGTA GGGCTGAATCCTGT ATTGA ACAGGACTTAGTCC TTTTAATTTACCCCT CKL_2288 2341700 - 2340816 - | hypothetical protein CKL_2289 2342039 - 2341704 - | transcriptional regulator TERM 2777 2342221 - 2342171 - H 93 -10.9 -3.79162 | gap 1, opp_overlap 2342180, overlap 2342174 2342180 CTTATATAAAATTAA GTATTATAATGTGACTAATAAGTC ATAT GACTTATTAGTCACATTATA-TGG AGGTATAGTGTAATG TERM 2778 2342219 - 2342174 - H 100 -19.5 -2.97123 | opp_overlap 2342180, overlap 2342171 2342180 ATATAAAATTAAGTA TTATAATGTGACTAATAAGTC ATAT GACTTATTAGTCACATTATAT GGAGGTATAGTGTAA TERM 2779 2342180 - 2342213 + H 100 -18.5 -3.49951 | opp_overlap 2342174 2342171 2342180 AATTAAGTATTATAA TGTGACTAATAAGTC ATAT GACTTATTAGTCACA TTATATGGAGGTATA TERM 2780 2342213 - 2342180 - H 100 -18.5 -3.48342 | opp_overlap 2342180, overlap 2342174 2342171 AATTAAGTATTATAA TGTGACTAATAAGTC ATAT GACTTATTAGTCACA TTATATGGAGGTATA CKL_2290 2342234 - 2342878 + | transcriptional regulator CKL_2291 2342880 - 2343578 + | ABC transporter ATPase TERM 2781 2343917 - 2343897 - g 79 -8.3 -4.10863 | overlap 2343895 ATACAAAAATAAACA TTCCCGCAA TCA TTGAGGGAA AAAACTTAAATGGAA TERM 2782 2345564 - 2345552 - g 84 -3.4 -5.76633 | opp_overlap 2345552 GGATATAGAAAAAAA GAGA TTTAC TCTC TCATATTAAACAGTT CKL_2292 2343578 - 2345821 + | permease TERM 2783 2345880 - 2345826 - T 100 -15.4 -5.61689 | opp_overlap 2345831, overlap 2345815 2345828 2345830 2345831 AAAATGAATAAAAAA TATATTCATGAAAAGCTGCTTCAAAA AAT TTTTAAAGCAGCTTTTCATGATTTTT CCATAATTGAATTAA TERM 2784 2345878 - 2345828 - T 100 -18 -4.40357 | opp_overlap 2345831, overlap 2345815 2345826 2345830 2345831 AATGAATAAAAAATA TATTCATGAAAAGCTGCTTCAAAA AAT TTTTAAAGCAGCTTTTCATGATTT TTCCATAATTGAATT TERM 2785 2345876 - 2345830 - T 100 -20.6 -3.77157 | opp_overlap 2345831, overlap 2345815 2345828 2345826 2345831 TGAATAAAAAATATA TTCATGAAAAGCTGCTTCAAAA AAT TTTTAAAGCAGCTTTTCATGAT TTTTCCATAATTGAA TERM 2786 2345831 - 2345875 + T 100 -21.9 -4.7078 | opp_overlap 2345815 2345831 2345830 2345828 2345826 GAATAAAAAATATAT TCATGAAAAGCTGCTTCAAAA AAT TTTTAAAGCAGCTTTTCATGA TTTTTCCATAATTGA TERM 2787 2345875 - 2345831 - T 100 -24.1 -2.84667 | opp_overlap 2345831, overlap 2345815 2345830 2345828 2345826 GAATAAAAAATATAT TCATGAAAAGCTGCTTCAAAA AAT TTTTAAAGCAGCTTTTCATGA TTTTTCCATAATTGA CKL_2293 2346412 - 2345870 - | hypothetical protein CKL_2294 2346607 - 2347368 + | ATPase TERM 2788 2347351 - 2347365 + F 78 -10 -2.75826 | opp_overlap 2347350 AGACTGTGGAGAGAC CGGGAA GTG TTCCCG TAATATGTTCAGATA CKL_2295 2347487 - 2347639 + | ATPase TERM 2789 2347624 - 2347614 - f 71 -4 -5.08601 | CTATTCTAACAAAAA CTTT TGG AAAG GAAATATTGACTTAA CKL_2296 2347691 - 2348008 + | ATPase TERM 2790 2348021 - 2348053 + T 86 -10.8 -2.8805 | opp_overlap 2348019 2348021 2348026, overlap 2348026 TAGAAACATTCAACA TAAAATACCCGCTG CTAGC TAGTGGGTATTTTA TATATCAGAGATAGT TERM 2791 2348026 - 2348048 + T 74 -6.3 -4.60797 | opp_overlap 2348021 2348019 2348026, overlap 2348021 ACATTCAACATAAAA TACCCGCTG CTAGC TAGTGGGTA TTTTATATATCAGAG CKL_2297 2348351 - 2348175 - | small acid-soluble spore protein CKL_2298 2348960 - 2348475 - | acetyltransferase CKL_2299 2350420 - 2349191 - | hypothetical protein CKL_2300 2351309 - 2350422 - | transporter protein TERM 2792 2350909 - 2350926 + g 72 -3.5 -5.31456 | CTCTTCATTCCTCCA GAAAGTT TAGA AATTTTC TTTTTTCTAACTTCA CKL_2301 2352120 - 2351341 - | hypothetical protein TERM 2793 2351838 - 2351820 - G 71 -3 -5.16841 | TTATAGTAATAAAAA CTGCATAG AAA CAAAGCAG ATCTGGAATATGACG CKL_2302 2352637 - 2352113 - | sigma factor-related protein TERM 2794 2352838 - 2352812 - R 88 -6.6 -5.21709 | TTTCACACTAAAAAA GTACAGTCACAA TGT TAATGACTGCAC AAAATACAATTATAT CKL_2303 2355303 - 2352853 - | cation-transporting ATPase TERM 2795 2355437 - 2355466 + r 74 -8.1 -3.52906 | opp_overlap 2355435 2355433 2355437 2355441, overlap 2355441 TCTCTTATGAATACA TAAACATATGAGT TATT GTTCATATGTTTA TTATATGCAATTATC TERM 2796 2355567 - 2355597 + r 95 -8.4 -5.09762 | opp_overlap 2355569, overlap 2355569 AAAGTTCTTTAAAAT AAGAGGTCAGATTA TTT TAATCTAACCTCTA TTTTTGTATTGAAGT TERM 2797 2355595 - 2355569 - R 100 -13.2 -4.17316 | opp_overlap 2355569 2355567 AGTTCTTTAAAATAA GAGGTCAGATTA TTT TAATCTAACCTC TATTTTTGTATTGAA TERM 2798 2355569 - 2355595 + r 95 -11 -4.17211 | opp_overlap 2355569, overlap 2355567 AGTTCTTTAAAATAA GAGGTCAGATTA TTT TAATCTAACCTC TATTTTTGTATTGAA CKL_2304 2356736 - 2355627 - | hypothetical protein CKL_2305 2357381 - 2356848 - | hypothetical protein CKL_2306 2357839 - 2357378 - | transcriptional regulator CKL_2307 2358478 - 2357861 - | methyltransferase TERM 2799 2357931 - 2357941 + g 80 -5.4 -5.28755 | GGTCTAAATCCGCAT CTTC TTA GAAG TTTTTTCATCTCTTT TERM 2800 2358498 - 2358548 + r 100 -19 -4.74706 | opp_overlap 2358500 2358509 2358514 TATCCTCCTCTATAT TAGTACTATAATAAAATAATAC TATTAAC GTATTATTTTATTATAGTACTA TTTTTCAATATTGAA TERM 2801 2358546 - 2358500 - R 100 -17.2 -2.62184 | opp_overlap 2358498, overlap 2358509 2358514 TCCTCCTCTATATTA GTACTATAATAAAATAATAC TATTAAC GTATTATTTTATTATAGTAC TATTTTTCAATATTG TERM 2802 2358622 - 2358653 + r 77 -5.4 -5.07107 | gap 1, opp_overlap 2358622 TTGATCATAAAAAAA TAGTAG-TCTCAA CGGATAA TTGAGAGCTACTA TTTTTTCAAACTTTC TERM 2803 2358653 - 2358622 - R 95 -6.1 -5.67063 | gap 1, opp_overlap 2358622 TTGATCATAAAAAAA TAGTAG-TCTCAAC GGATA ATTGAGAGCTACTA TTTTTTCAAACTTTC rotA 2359216 - 2358692 - | RotA TERM 2804 2358938 - 2358949 + g 78 -5.8 -4.84363 | CATTGTTCTAGCCAT GGAG ATCA CTCC TTTTTCATGCTTTAA TERM 2805 2360075 - 2360060 - g 71 -5.4 -4.60317 | ATATAAGAATGAAAA GAAGTG ACTA CACTCC TGAAATGGTAGCTAA TERM 2806 2360715 - 2360697 - g 79 -7.4 -4.3586 | overlap 2360699 CTATGTATATGAAAA TCCAGAGG CAA CCCCTGAA GATAGAAAAAAAGCC CKL_2309 2359387 - 2361081 + | oligoendopeptidase TERM 2807 2361556 - 2361595 + F 100 -15.2 -5.03994 | opp_overlap 2361558, overlap 2361558 GGTGGCACCACGGAT AAGCGTCAATTCGTCCTA TTAT TAAGACGAATTGACGCTG TTTTTATATCTAAAA TERM 2808 2361593 - 2361558 - f 100 -20 -3.37796 | opp_overlap 2361556 2361558 TGGCACCACGGATAA GCGTCAATTCGTCCTA TTAT TAAGACGAATTGACGC TGTTTTTATATCTAA TERM 2809 2361558 - 2361593 + F 100 -17.8 -4.14422 | opp_overlap 2361558, overlap 2361556 TGGCACCACGGATAA GCGTCAATTCGTCCTA TTAT TAAGACGAATTGACGC TGTTTTTATATCTAA TERM 2810 2362007 - 2361990 - g 75 -2.7 -5.626 | GATCTTATAAAAAAA GGACATA AATT TATTTCC GATAGTGATTGCGAA asn 2361732 - 2363321 + | asparagine synthetase B CKL_2311 2364778 - 2363408 - | hypothetical protein uppP 2365901 - 2365050 - | undecaprenyl pyrophosphate phosphatase TERM 2811 2365215 - 2365243 + g 74 -8.9 -3.13908 | opp_overlap 2365218, overlap 2365218 2365237 AACAAATCCTAATAT TAATGAGATCCAC AAA GTGGTGCTCATTA TTGAGTAATTAAATT TERM 2812 2366237 - 2366205 - R 72 -5.7 -4.48072 | ATATTCACCACAAAA GAAAAATAGAGCAGA CTA TCTATTCCATTTTCC ACTTTGCTTTACTTT CKL_2313 2367129 - 2366287 - | hypothetical protein CKL_2314 2368953 - 2368117 - | DNA methylase TERM 2813 2368858 - 2368875 + g 71 -2.1 -5.47218 | TTCATAATAAGTTGA TATATTT TTAG GAATATA TTTTTTTAACTCAGG TERM 2814 2368889 - 2368901 + g 77 -7.7 -4.07568 | opp_overlap 2368889 TATTTTTTTAACTCA GGCAA TAG TTGCC TTTTACCGCCAGCCC CKL_2315 2369940 - 2369818 - | hypothetical protein TERM 2815 2371455 - 2371441 - g 84 -5.6 -5.32882 | TATTATGACAAAAAA GCCAAC TGT GCCGGC ATATGGTTAATTGCA TERM 2816 2371605 - 2371595 - g 81 -4.6 -5.40474 | ATTGTGTCAAAAAAA GCCC CAA AGGC CAGTCTAGATATAAT CKL_2316 2370310 - 2371953 + | hypothetical protein TERM 2817 2372015 - 2372048 + T 100 -10.5 -4.92791 | opp_overlap 2372012 TTTAAACAAGCAGCA GGTAGTTAATTGTTT TCTA ACACAGTTAACTACC TTTTATTCTCTTCTC CKL_2317 2372334 - 2372044 - | hypothetical protein CKL_2318 2373596 - 2372403 - | transporter protein CKL_2319 2374528 - 2373626 - | sensor kinase CKL_2320 2375297 - 2374545 - | hypothetical protein CKL_2321 2376207 - 2375281 - | ABC transporter ATPase CKL_2322 2376968 - 2376294 - | transcriptional regulator TERM 2818 2377077 - 2377101 + H 86 -10.3 -3.2963 | overlap 2377072 CCATCATATCTACTC TTTTAGTATTA ATC TAATACTAAAA TTATGCAAAAATCAT CKL_2323 2377181 - 2377576 + | hypothetical protein TERM 2819 2377828 - 2377858 + F 100 -10.6 -4.73108 | opp_overlap 2377853, overlap 2377853 2377854 ATCATGTATATTTTG GTGCCTATTATTAA TAG TAAATAATGGGCAC TTTTAATTTTATAAA CKL_2324 2377913 - 2378596 + | 3-oxoacyl-[acyl-carrier-protein] synthase TERM 2820 2379461 - 2379446 - gT 71 -7.6 -3.53012 | TCTTCTTGCTTTAAA TGCTTC AATC GAAGCA GCAAGAGCAGGTGAA CKL_2325 2378481 - 2379929 + | methyl-accepting transducer CKL_2326 2380835 - 2380041 - | hypothetical protein TERM 2821 2381078 - 2381100 + H 71 -7.1 -3.72407 | gap 1, overlap 2381081 TTGCAGTTACTTTTT GAAG-GAGGA TTAT TCCTCACTTC TCTTTTAACATTTAT TERM 2822 2381232 - 2381252 + G 100 -10.5 -5.50723 | opp_overlap 2381232 2381234 CCAGATTGTACACTA CAGGATGTT AAC AGCATCCTG TTTTTATTTTACTAC CKL_2327 2381179 - 2381430 + | hypothetical protein CKL_2328 2381875 - 2381396 - | hypothetical protein CKL_2329 2383541 - 2381922 - | ABC transporter ATPase TERM 2823 2382028 - 2382053 + g 71 -9.1 -2.57548 | opp_overlap 2382020 2382035, overlap 2382020 2382027 TCAGTAAGTCTCATC TGCAAGATGGA CTTT TCCATGTTGCA ATTACTGCTGTTATT TERM 2824 2383692 - 2383680 - R 70 -4.8 -4.7261 | ATCCAGCAAAATAAA GGCA TGCCT TGCC CATAAAATTTAAATT hydF 2385058 - 2383817 - | HydF TERM 2825 2385129 - 2385142 + r 70 -8.1 -2.98814 | overlap 2385128 CCTCCTCTTTATATT CCTGG TATT CCAGG CTTTGTAAGTTGATA aspA2 2386519 - 2385122 - | aspartate ammonia-lyase CKL_2332 2390086 - 2386559 - | hypothetical protein TERM 2826 2387872 - 2387888 + g 74 -6.7 -4.30719 | AGCTTATACCCTTCT TGAAAAA AAA TTTTTCA TTTCTTATAAGGGAA TERM 2827 2390154 - 2390125 - R 100 -10.3 -5.38958 | opp_overlap 2390125 ACTTATAAACAAAAA CACTATTAAAATC AACG AATTTTAATAGTG TTCTTTAATTTTAAG TERM 2828 2390125 - 2390154 + r 88 -9.6 -4.21465 | opp_overlap 2390125 ACTTATAAACAAAAA CACTATTAAAAT CAACGA ATTTTAATAGTG TTCTTTAATTTTAAG CKL_2333 2390500 - 2390165 - | hypothetical protein CKL_2334 2391334 - 2390585 - | hypothetical protein clpA 2394008 - 2391768 - | hypothetical protein TERM 2829 2392925 - 2392904 - G 74 -8.9 -3.00946 | opp_overlap 2392904 2392901, overlap 2392901 2392906 CTTCTTTATAAATTA CATTATGAA ATTT TTCATAATG TTCTTTTATACCTGA TERM 2830 2392904 - 2392925 + g 88 -8.9 -4.33182 | opp_overlap 2392901 2392904 2392906, overlap 2392901 CTTCTTTATAAATTA CATTATGAA ATTT TTCATAATG TTCTTTTATACCTGA TERM 2831 2394038 - 2394053 + r 77 -7.6 -4.18934 | TTCCATACTAAATTT TAGTGG AAAT CCACTA TTTCTTGCCATACTG clpS 2394313 - 2394014 - | ClpS TERM 2832 2394272 - 2394284 + g 75 -4.9 -5.09259 | AGGTGGTCTTTTAAT TTCAA CTT TTGAA TTTTGTTTTAAAATA dnaK6 2395934 - 2394462 - | DnaK6 dnaK7 2397442 - 2395952 - | DnaK7 CKL_2339 2399071 - 2397485 - | hypothetical protein TERM 2833 2398647 - 2398663 + g 71 -2.3 -5.34555 | TACGCCACAAGTTCC TGGAT TCTGGAT ATCCA TTTTTTATAGTCTAA dnaK8 2400678 - 2399086 - | DnaK8 dnaK9 2402311 - 2400689 - | DnaK9 TERM 2834 2402612 - 2402650 + r 71 -7.6 -3.70037 | opp_overlap 2402606 2402612, overlap 2402606 2402613 TAACTATAACAAGGA GGCTTGTTTAACACTATA CTG TATACTGTAAAACAAGCA TTTAACTAGTCATTA TERM 2835 2402613 - 2402649 + r 86 -11.1 -2.8154 | opp_overlap 2402606 2402612, overlap 2402606 2402612 AACTATAACAAGGAG GCTTGTTTAACACTATA CTG TATACTGTAAAACAAGC ATTTAACTAGTCATT CKL_2342 2403237 - 2402656 - | chemical agent resistance protein CKL_2343 2404296 - 2403388 - | hypothetical protein CKL_2344 2404612 - 2405319 + | hypothetical protein TERM 2836 2405378 - 2405330 - T 93 -11.4 -3.70919 | opp_overlap 2405329 2405328 2405332 2405335, overlap 2405335 TTTAAACTTTAACAA TATAAGGATCTGTGGTAAAACA ACCTG TATTTTACAATAGATCCTTATA GATTTTCATCACCTT TERM 2837 2405332 - 2405376 + T 77 -9.6 -2.77781 | opp_overlap 2405330 2405335, overlap 2405329 2405328 2405335 TAAACTTTAACAATA TAAGGATCTGTGGTAAAACA ACCTG TATTTTACAATAGATCCTTA TAGATTTTCATCACC CKL_2345 2405841 - 2405374 - | transcriptional regulator CKL_2346 2406698 - 2405847 - | hypothetical protein TERM 2838 2406781 - 2406820 + r 84 -9.6 -3.63627 | opp_overlap 2406793, overlap 2406782 TTATATCATTTTTTT AGTTATTATCAATACTGA TATA TCAGTATTGATAATAAAA TTTAAAATATAAAAG TERM 2839 2406782 - 2406819 + r 100 -13.1 -2.77962 | opp_overlap 2406793, overlap 2406781 TATATCATTTTTTTA GTTATTATCAATACTGA TATA TCAGTATTGATAATAAA ATTTAAAATATAAAA CKL_2347 2407269 - 2406988 - | hypothetical protein TERM 2840 2407381 - 2407365 - R 88 -9.5 -4.19879 | opp_overlap 2407367 ACAAAATCCTTAAAA GAGGTAT GAA ATACCTC TTAACAATTATTAAT TERM 2841 2407654 - 2407613 - R 76 -8.9 -3.08642 | opp_overlap 2407614, overlap 2407619 ATATTATTGATTTAA TGAAAATAGAGACAGAACG CACA CACTCCATCTCTATTTTCT AATTTTTATTCACTT TERM 2842 2407648 - 2407619 - R 72 -6.5 -4.43477 | opp_overlap 2407614, overlap 2407613 TTGATTTAATGAAAA TAGAGACAGAACG CACA CACTCCATCTCTA TTTTCTAATTTTTAT CKL_2348 2409556 - 2407664 - | phosphatase-related protein CKL_2349 2411220 - 2409691 - | sensory transduction histidine kinase CKL_2350 2411900 - 2411217 - | transcriptional regulator TERM 2843 2412072 - 2412092 + r 79 -6.9 -4.70659 | opp_overlap 2412085, overlap 2412074 2412075 2412079 2412085 TTAGCTAATTGATGC GTTTAGGAT AAA ATCCTATAC TTTTTAAGTATAGGA TERM 2844 2412079 - 2412113 + r 100 -13.2 -2.59069 | opp_overlap 2412085, overlap 2412075 2412072 2412074 2412085 ATTGATGCGTTTAGG ATAAAATCCTATACTT TTT AAGTATAGGATTTTAA ATAGTTTTTATCAAT TERM 2845 2412107 - 2412085 - R 100 -12.2 -4.46212 | opp_overlap 2412075 2412072 2412085 2412079 2412074 GCGTTTAGGATAAAA TCCTATACTT TTT AAGTATAGGA TTTTAAATAGTTTTT TERM 2846 2412085 - 2412107 + r 100 -12.2 -4.28589 | opp_overlap 2412085, overlap 2412075 2412072 2412079 2412074 GCGTTTAGGATAAAA TCCTATACTT TTT AAGTATAGGA TTTTAAATAGTTTTT CKL_2351 2413123 - 2412134 - | methyl-accepting transducer TERM 2847 2413241 - 2413268 + r 100 -11.6 -4.60924 | opp_overlap 2413241 TGTAAATAATAAAAA CATTAAAAAGAA CACA TTCTTTTTAATG TTTTTAGAACATTTA TERM 2848 2413268 - 2413241 - R 100 -11.6 -5.38549 | opp_overlap 2413241 TGTAAATAATAAAAA CATTAAAAAGAA CACA TTCTTTTTAATG TTTTTAGAACATTTA CKL_2352 2413559 - 2413287 - | hypothetical protein CKL_2353 2414616 - 2413714 - | hypothetical protein CKL_2354 2419265 - 2414655 - | nonribosomal peptide synthetase TERM 2849 2415683 - 2415693 + g 70 -4 -5.02074 | opp_overlap 2415678 2415683 TCAATAAATAGATAA TACT ATC AGTA TTTTTTAGCAGCTGA TERM 2850 2415741 - 2415754 + g 71 -6.7 -4.12226 | CAGGTATCCGGTACT TCCTG TTAT CAGGA TATTTTTATACTTGT TERM 2851 2415993 - 2415955 - G 87 -11.4 -3.00498 | opp_overlap 2415963 2415969, overlap 2415963 2415969 GATAGTTTAGATATA GTCTGAAATTGAAATAAA TCA TTTATTTCAATTTCAAAA TCCATGGACATTTTG TERM 2852 2415963 - 2415985 + g 82 -9.4 -3.57792 | opp_overlap 2415963 2415955 2415969, overlap 2415969 AGATATAGTCTGAAA TTGAAATAAA TCA TTTATTTCAA TTTCAAAATCCATGG TERM 2853 2415985 - 2415963 - G 82 -9.4 -3.60502 | opp_overlap 2415963 2415969, overlap 2415955 2415969 AGATATAGTCTGAAA TTGAAATAAA TCA TTTATTTCAA TTTCAAAATCCATGG CKL_2355 2422874 - 2419302 - | hybrid nonribosomal peptide synthetase/polyketide synthase TERM 2854 2421019 - 2421034 + g 82 -2.6 -6.04378 | TCTTTTTGAAAGGAA TAAGTT GGTA AGCTTA TTTTTTTTCTCCTTT TERM 2855 2422653 - 2422673 + g 71 -2 -5.42198 | gap 1, opp_overlap 2422655, overlap 2422655 CATTCCAATGTAATT G-AGATATT TGTC AATATCTTC TTTTCTTTTTTCAGG TERM 2856 2422655 - 2422670 + g 72 -4.8 -4.75934 | opp_overlap 2422655, overlap 2422653 TTCCAATGTAATTGA GATATT TGTC AATATC TTCTTTTCTTTTTTC CKL_2356 2424173 - 2422908 - | PKS acyl carrier CKL_2357 2426709 - 2424184 - | NRPS adenylation domain containing protein TERM 2857 2426383 - 2426364 - G 74 -2.2 -5.64274 | opp_overlap 2426356 2426354 CTATTGATAAAAAAA TCTTTTTA TCTG TAATAAGA AAGGGATTATTTAAT CKL_2358 2428988 - 2426778 - | permease TERM 2858 2428477 - 2428453 - G 73 -4.3 -5.02074 | opp_overlap 2428457 2428471 TCACTGGTTAAAAAA CCAATGCCAAA ATT TTTGGGATTTG CCACCACATCCTCTA TERM 2859 2428855 - 2428840 - G 71 -7.5 -3.5627 | opp_overlap 2428840 ATATTATTTTTTAAA GCGGC TTCTCT GCCGC TTTCAATAATACAAT TERM 2860 2428840 - 2428855 + g 73 -7.5 -3.68529 | opp_overlap 2428840 ATATTATTTTTTAAA GCGGC TTCTCT GCCGC TTTCAATAATACAAT CKL_2359 2429719 - 2429021 - | ABC transporter ATPase TERM 2861 2429235 - 2429255 + g 72 -4.8 -4.90266 | gap 1, overlap 2429224 2429238 GCCCCTGTTGGTTCA TCACAAAGC AACA GCTTTG-GA TTTTTAATTAGTGCC CKL_2360 2431102 - 2429744 - | hypothetical protein TERM 2862 2430342 - 2430321 - G 72 -8.8 -3.15574 | overlap 2430319 TCAACCCCATTAACA CTGCTGAT TATTCC ATCAGCAG GAGCCAAAACTGTAC TERM 2863 2431153 - 2431113 - R 100 -12.3 -4.08945 | opp_overlap 2431119, overlap 2431116 2431119 ATCACCTCTTTAAAA TAACAATTATTGATAATGA ATT TCAATATCAATAATTATTA TATCACTGATAATAT TERM 2864 2431150 - 2431116 - R 88 -9.6 -4.17316 | opp_overlap 2431119, overlap 2431113 2431119 ACCTCTTTAAAATAA CAATTATTGATAATGA ATT TCAATATCAATAATTA TTATATCACTGATAA TERM 2865 2431119 - 2431147 + r 84 -9.1 -3.8969 | opp_overlap 2431116 2431113 2431119 TCTTTAAAATAACAA TTATTGATAATGA ATT TCAATATCAATAA TTATTATATCACTGA TERM 2866 2431147 - 2431119 - R 86 -9.1 -4.20868 | opp_overlap 2431119, overlap 2431116 2431113 TCTTTAAAATAACAA TTATTGATAATGA ATT TCAATATCAATAA TTATTATATCACTGA CKL_2361 2432150 - 2431374 - | hypothetical protein CKL_2362 2432844 - 2432143 - | ABC transporter ATPase CKL_2363 2433212 - 2432847 - | transcriptional regulator TERM 2867 2433361 - 2433340 - R 77 -5.1 -5.20735 | GCAACAAAAAATAAA CGGCCACTA GTTA CAATGACCG TAATCATGTATTCTT CKL_2364 2434609 - 2433365 - | hypothetical protein TERM 2868 2433781 - 2433801 + g 81 -4.1 -5.55855 | GATTGATTATCCATT TTTTAGCTG ATG TAGTTAAAA TTTTATTTTTTTGCG TERM 2869 2434709 - 2434754 + r 95 -11.7 -3.03243 | gap 1, opp_overlap 2434720, overlap 2434720 AACCGACAAATCTCA CTTT-AATAAAATCCATAAATA TTA TTTTTATGGATTTTATTAAAAG TATTGAAACCTGAGT TERM 2870 2434720 - 2434742 + r 77 -6.4 -4.65078 | opp_overlap 2434720, overlap 2434709 CTCACTTTAATAAAA TCCATAAATA TTA TTTTTATGGA TTTTATTAAAAGTAT TERM 2871 2434742 - 2434720 - R 77 -6.4 -4.65916 | opp_overlap 2434720 2434709 CTCACTTTAATAAAA TCCATAAATA TTA TTTTTATGGA TTTTATTAAAAGTAT CKL_2365 2434997 - 2434773 - | integrase TERM 2872 2435710 - 2435670 - H 100 -17 -2.62439 | opp_overlap 2435671 2435673, overlap 2435678 AATACTGTGAAACAT TGTCAAAAGGCGGCTTTG GAAAT CAAAGCCGCCTTTTGCCT TTTTTAGTCGGACAT TERM 2873 2435671 - 2435709 + H 100 -21.2 -5.14563 | opp_overlap 2435670 2435678, overlap 2435673 ATACTGTGAAACATT GTCAAAAGGCGGCTTTGG AAA TCAAAGCCGCCTTTTGCC TTTTTTAGTCGGACA TERM 2874 2435673 - 2435707 + H 100 -22.4 -2.80472 | opp_overlap 2435670 2435678, overlap 2435671 ACTGTGAAACATTGT CAAAAGGCGGCTTTGG AAA TCAAAGCCGCCTTTTG CCTTTTTTAGTCGGA TERM 2875 2435702 - 2435678 - H 100 -15.8 -4.15543 | opp_overlap 2435673 2435671, overlap 2435670 GAAACATTGTCAAAA GGCGGCTTTG GAAAT CAAAGCCGCC TTTTGCCTTTTTTAG TERM 2876 2435749 - 2435787 + H 84 -9.1 -3.95435 | overlap 2435744 2435750 CCTCTTGACTTTCAG CCCTAATTCGTATTATG CTATA TATAGTACGAATTAGGA TTATATTTTGCCAAA TERM 2877 2435750 - 2435786 + H 100 -12.6 -2.96779 | overlap 2435749 2435744 CTCTTGACTTTCAGC CCTAATTCGTATTATG CTATA TATAGTACGAATTAGG ATTATATTTTGCCAA CKL_2366 2435819 - 2436265 + | transcriptional regulator TERM 2878 2436569 - 2436593 + G 74 -8.5 -3.33792 | overlap 2436567 TCACCAGTGTTTCCA CCTATCCCGAA TAT TCCGGGAAAGG TATTATGTCAATACT CKL_2367 2436271 - 2437494 + | hypothetical protein CKL_2368 2438144 - 2437632 - | transposase TERM 2879 2438358 - 2438335 - R 95 -9 -5.08824 | opp_overlap 2438335 GGCGCACCTAAAAAA TGACTATGGT TTGA ACCATAATCA TTTAAAATACGTAAT CKL_2369 2438850 - 2438398 - | hypothetical protein CKL_2370 2440097 - 2439000 - | hypothetical protein TERM 2880 2439510 - 2439525 + g 70 -6.2 -4.16279 | overlap 2439521 TCTATCTCCTATGCT TGAAAG ATCC CTTTCA TTTTGAGATAGTATA CKL_2371 2441113 - 2440217 - | hypothetical protein TERM 2881 2441092 - 2441103 + g 77 -3 -5.52986 | opp_overlap 2441089 2441092 2441102 GACAGCTGAACATTA TGAT TAAA ATCA TTTTTTTCATAAAAT TERM 2882 2441283 - 2441241 - R 70 -8 -3.08187 | AAATATTGTAGCCAA TGGTATAGAAATTTTAACAT TTT ACATGCAAATTTCTATACCA CTGGCTACCTATCTA CKL_2372 2441684 - 2441292 - | transcriptional regulator CKL_2373 2441915 - 2442076 + | hypothetical protein TERM 2883 2442151 - 2442108 - T 78 -7 -4.48987 | opp_overlap 2442108, overlap 2442111 2442116 TTTGTAGAATTAAAA TGATAAAATCGTTGATGATT TACA ATTTATCAACGATTTTATTA TTTTTGTTTACTGGA TERM 2884 2442108 - 2442151 + T 100 -11.4 -5.33405 | opp_overlap 2442108 2442111 2442116 TTTGTAGAATTAAAA TGATAAAATCGTTGATGATT TACA ATTTATCAACGATTTTATTA TTTTTGTTTACTGGA TERM 2885 2442148 - 2442111 - T 74 -8.7 -3.20455 | opp_overlap 2442108, overlap 2442108 2442116 GTAGAATTAAAATGA TAAAATCGTTGATGATT TACA ATTTATCAACGATTTTA TTATTTTTGTTTACT carB2 2445386 - 2442168 - | carbamoyl phosphate synthase large subunit TERM 2886 2443324 - 2443298 - G 79 -8.8 -3.89524 | ACCCTATTTCAGAAA CCAGTTTATAAG CTT CTTTCAAACTGG TTACAGACCCTCCTA TERM 2887 2443918 - 2443897 - G 89 -10.3 -3.78022 | TTCATACCCATCAAA TTACAGATG TATT CATCTGTAA ATCCCATTAATTCTG TERM 2888 2445002 - 2445012 + g 77 -3.2 -5.5604 | TTTTAAAACTTTCCC TGTC CTC GGCA TTTTTTATTGATTCA carA2 2446472 - 2445408 - | carbamoyl phosphate synthase small subunit TERM 2889 2445551 - 2445562 + g 71 -3 -5.25799 | opp_overlap 2445551 TATTATCATTTAAAT TAAC ATGA GTTA TTTTTATATTGTTTT argF 2447497 - 2446487 - | hypothetical protein CKL_2377 2448314 - 2447514 - | lysine-arginine-ornithine-binding extracellular protein precursor TERM 2890 2448281 - 2448304 + g 77 -3.2 -5.68023 | ATATTGCACCAAATA TAACAGTAAT TATA ATTGCAGTTA TTTTTTTCATTATCA CKL_2378 2449541 - 2448636 - | hypothetical protein recQ 2451697 - 2449538 - | RecQ CKL_2380 2452041 - 2451814 - | hypothetical protein TERM 2891 2452115 - 2452095 - R 80 -6.3 -4.82901 | opp_overlap 2452095 TTGGGGTTATAAAAA TTAATGAAT TAT ACTCATTAA TCTACTAAATAATTG CKL_2381 2453021 - 2452152 - | transcriptional regulator TERM 2892 2452961 - 2452949 - G 75 -4.7 -4.9725 | opp_overlap 2452949 ACTGGGATATAAAAA GCTGC TCT GCCGC TTTAGTCATATTCAT TERM 2893 2453212 - 2453241 + G 80 -6.5 -4.88918 | opp_overlap 2453221, overlap 2453200 TCATTGGAAATATGT TTCCAATTATAGG CAGT CCTATACTCGGAA TTTTATTTGGAATGA CKL_2382 2453130 - 2454125 + | hypothetical protein CKL_2383 2454549 - 2454235 - | hypothetical protein CKL_2384 2457711 - 2454670 - | chaperone-related protein TERM 2894 2457371 - 2457361 - G 71 -5.4 -4.7219 | TATATTAATATAAAA TCCT TTC AGGA AACCATTATATTTAC TERM 2895 2457966 - 2458007 + r 91 -10.5 -3.89617 | opp_overlap 2457967 2457974, overlap 2457967 2457974 ATTTAAAGCATAATA ATGTAAAATAGACGTTAAA ATAT TTTAACATCTATTTTACAC TTTAAATTTCTAGAT TERM 2896 2457967 - 2458006 + r 100 -14 -2.93047 | opp_overlap 2457967 2457974, overlap 2457966 2457974 TTTAAAGCATAATAA TGTAAAATAGACGTTAAA ATAT TTTAACATCTATTTTACA CTTTAAATTTCTAGA TERM 2897 2458006 - 2457967 - R 100 -16.2 -3.93216 | opp_overlap 2457966 2457967 2457974, overlap 2457974 TTTAAAGCATAATAA TGTAAAATAGACGTTAAA ATAT TTTAACATCTATTTTACA CTTTAAATTTCTAGA TERM 2898 2457999 - 2457974 - R 83 -8.5 -4.37734 | opp_overlap 2457967 2457966 2457974, overlap 2457967 CATAATAATGTAAAA TAGACGTTAAA ATAT TTTAACATCTA TTTTACACTTTAAAT TERM 2899 2457974 - 2457999 + r 70 -6.3 -4.24404 | opp_overlap 2457974 2457967, overlap 2457967 2457966 CATAATAATGTAAAA TAGACGTTAAA ATAT TTTAACATCTA TTTTACACTTTAAAT CKL_2385 2461062 - 2458009 - | transporter protein CKL_2386 2462289 - 2461156 - | 36 kDa antigen TERM 2900 2462287 - 2462269 - G 77 -4.6 -5.26155 | AGACAAACATAAAAA GGACAAAA ATA TTTTTTCC ATGCTATCCCCCCTA CKL_2387 2462459 - 2463016 + | transcriptional regulator CKL_2388 2463234 - 2463404 + | hypothetical protein TERM 2901 2463943 - 2463927 - f 82 -8.1 -4.45484 | overlap 2463894 AAGATATATAATAAA TACATCT TTT AGATGTA CAGGAGAAGATTAAA CKL_2389 2463959 - 2464489 + | transcriptional regulator TERM 2902 2464762 - 2464772 + G 77 -4 -5.39681 | opp_overlap 2464762 TCGTTAAGCAATGCA TTAG CAC CTAA TTTTTCTTTCCTTCT TERM 2903 2465318 - 2465328 + G 70 -8.2 -3.10017 | overlap 2465314 TATGGCTATCTGTGG GGGC AAT GCCC TATCTATTAACAATT CKL_2390 2464495 - 2465859 + | proton-dependent transporter TERM 2904 2466063 - 2466099 + T 80 -7.5 -4.4715 | opp_overlap 2466065, overlap 2466065 TTAGCTATAAAAAAA TAGGTATAAGGCCTT ATATATC AAGGTTTTATACCTG TTTTATGAGTTACAC TERM 2905 2466065 - 2466097 + T 73 -7.9 -3.84304 | opp_overlap 2466065, overlap 2466063 AGCTATAAAAAAATA GGTATAAGGCCTT ATATATC AAGGTTTTATACC TGTTTTATGAGTTAC TERM 2906 2466340 - 2466314 - T 71 -3.8 -5.08255 | opp_overlap 2466314 ATTTGTAAAATAAAA TTTGCATTAAAA AAA TTATTATGCAAA TACTTATTAATGTAA CKL_2391 2466559 - 2466383 - | hypothetical protein CKL_2392 2467358 - 2466747 - | ABC transporter ATPase TERM 2907 2466944 - 2466931 - G 71 -8.1 -3.29325 | opp_overlap 2466935, overlap 2466925 2466929 CTTTTATAAGCAACA GCCCT TGCC AGGGC AACTCTTCTTTTCAT CKL_2393 2468142 - 2467366 - | ABC transporter permease CKL_2394 2469061 - 2468072 - | transporter protein CKL_2395 2469832 - 2469137 - | short-chain dehydrogenases/reductase TERM 2908 2469727 - 2469717 - G 70 -4 -5.01535 | overlap 2469721 TTAGAATCATAAAAA TCTA CTT TAGA AAAATCTCTTCCAAA CKL_2396 2470858 - 2469845 - | hypothetical protein CKL_2397 2471657 - 2470824 - | hypothetical protein TERM 2909 2471297 - 2471315 + gr 75 -7.5 -3.9122 | overlap 2471314 CTTTAACTATTTTAG GGAAACT CTCCA AGTTTCC TTCTTTAAAAGGGTG TERM 2910 2471624 - 2471599 - GR 74 -8.3 -3.55071 | overlap 2471582 TTATACTTTTTTAAA GCAAAGCCATC TATA AAAGGCTTTGC TTCACAATACAATGC CKL_2398 2472369 - 2471782 - | protein kinase TERM 2911 2472486 - 2472469 - R 71 -4.2 -5.14698 | opp_overlap 2472469 AAACTGAAAACAAAA CTGTAA CATTAC TTACAG TTTGTTTCTTTAAAT pyrD1 2473706 - 2472501 - | dihydropyrimidine dehydrogenase CKL_2400 2474030 - 2473707 - | hypothetical protein CKL_2401 2475425 - 2474058 - | D-hydantoinase CKL_2402 2476954 - 2475455 - | uracil permease amaB 2478220 - 2476994 - | allantoate amidohydrolase TERM 2912 2477677 - 2477690 + g 95 -5.3 -5.93809 | overlap 2477668 GAGCTTTATAATCCT TAGGA TTTA TCCTA TTTTTTTTATCACCC TERM 2913 2478060 - 2478070 + g 71 -6.8 -4.11501 | TCCGTTATAATTTCT GCAC CCA GTGC TTTCATTCTCTTTGA TERM 2914 2478198 - 2478210 + g 79 -2.7 -5.77856 | TCCTCCATTCTCTCT TTATC ACA GGTAA TTTTTTTCATTTCTT CKL_2404 2479708 - 2478350 - | aminotransferase TERM 2915 2479204 - 2479191 - G 71 -8.1 -3.19383 | opp_overlap 2479194, overlap 2479190 AAAAATTTAACAAAT CCTGG TATA CCAGG TTCACAGGTATACCT TERM 2916 2479194 - 2479218 + g 77 -8.6 -3.71487 | opp_overlap 2479191 2479190 AATTTAACAAATCCT GGTATACCAG GTTCA CAGGTATACC TTCTTGGCTCTCCTG dhaT1 2480868 - 2479720 - | DhaT1 TERM 2917 2481067 - 2481035 - R 100 -10.9 -6.02914 | opp_overlap 2481041 TTTATATAAAAAAAA TAAAAATTACAAAAG ATA CTTTTGCAATTTTCA CTCCCTAAAAGTAAG CKL_2406 2482311 - 2481097 - | transcriptional regulator TERM 2918 2482480 - 2482457 - R 100 -7.4 -5.79595 | opp_overlap 2482457 GCTTAAAATAAAAAA CTGCTGCAAT AATT AACGCAGCAG TTATCTGTATTCAAT speB 2483479 - 2482532 - | hypothetical protein TERM 2919 2483618 - 2483594 - R 95 -7.3 -5.42259 | TTACTGTCAAAAAAA GAACAACTA AAACTAA TAGTTGTTC CCAATTTCAAGAAAA maeB 2484892 - 2483660 - | MaeB CKL_2409 2486465 - 2484999 - | transport protein TERM 2920 2485988 - 2485976 - G 88 -3.3 -5.93809 | TGTTTATAAAAAAAA TCCAG TGC CAGGA CAAAGTATCTATTAA TERM 2921 2486513 - 2486538 + r 88 -7.6 -4.89009 | opp_overlap 2486513 GCACTCTCCAAAAAA CTTCAGGTTC ATTTAC GATCCTGAAG TTTTTCATTGAATAT TERM 2922 2486538 - 2486513 - R 91 -8.3 -5.02074 | opp_overlap 2486513 GCACTCTCCAAAAAA CTTCAGGTTCA TTTA CGATCCTGAAG TTTTTCATTGAATAT CKL_2410 2487747 - 2486569 - | hypothetical protein rnz 2488824 - 2487913 - | ribonuclease Z TERM 2923 2488104 - 2488089 - G 75 -4.8 -5.00616 | CCGCTTCCGAAAAAA TCATAT GCTT ATATGA AATAGCCTTATGCTT TERM 2924 2488914 - 2488895 - R 91 -10 -4.16371 | opp_overlap 2488895 TATTAAACAATTAAA GCTGCAGA TATA CCTGCAGC TTATGTTACTATGTT TERM 2925 2488895 - 2488914 + r 86 -9.3 -3.75655 | opp_overlap 2488895 TATTAAACAATTAAA GCTGCAG ATATAC CTGCAGC TTATGTTACTATGTT CKL_2412 2489212 - 2488991 - | transcriptional regulator CKL_2413 2491511 - 2489328 - | methyl-accepting chemotaxis protein TERM 2926 2490374 - 2490392 + g 75 -2.4 -5.61596 | ATTCAAGAGCATATT CCCTTATT TTA AATAGAGG TTTTTTTATGCCCCT TERM 2927 2490636 - 2490669 + g 84 -5.5 -5.36965 | gap 1 ATTTCCTTCCAGTTC TGC-AAGAGAGGTAAG AGA TTTATCTTTCTTCGCA TTTTTTATGGTATTA pdxT 2492243 - 2491677 - | glutamine amidotransferase subunit PdxT pdxS 2493116 - 2492247 - | pyridoxine biosynthesis protein TERM 2928 2493242 - 2493267 + r 77 -7.7 -4.21098 | opp_overlap 2493242 TTTTCTCAAGCTAAA GAGCTTATC CCATAACT GATAAGCTC TTTTAACATTGCTAT TERM 2929 2493267 - 2493242 - R 73 -7.7 -3.75153 | opp_overlap 2493242 TTTTCTCAAGCTAAA GAGCTTATC CCATAACT GATAAGCTC TTTTAACATTGCTAT CKL_2416 2494610 - 2493282 - | phosphodiesterase CKL_2417 2494805 - 2495791 + | bifunctional BirA-related protein CKL_2418 2495873 - 2497039 + | isoaspartyl dipeptidase CKL_2419 2497782 - 2497036 - | hypothetical protein CKL_2420 2497906 - 2498583 + | transcriptional regulator TERM 2930 2498587 - 2498624 + T 80 -10.1 -2.87274 | opp_overlap 2498587 2498594, overlap 2498592 2498593 TTATTATTTTGACAA TTAAAAAGGAAACGAAA AATT TTTCGTTTCCCCTTTAA TAATTCATTCTAGCA TERM 2931 2498624 - 2498587 - T 100 -14.5 -3.31792 | opp_overlap 2498587 2498592 2498593, overlap 2498594 TTATTATTTTGACAA TTAAAAAGGAAACGAAA AATT TTTCGTTTCCCCTTTAA TAATTCATTCTAGCA TERM 2932 2498593 - 2498618 + T 74 -9.1 -2.91342 | opp_overlap 2498587 2498594, overlap 2498592 2498587 TTTTGACAATTAAAA AGGAAACGAAA AATT TTTCGTTTCCC CTTTAATAATTCATT TERM 2933 2498617 - 2498594 - T 100 -12.6 -4.93365 | opp_overlap 2498593 2498592 2498587, overlap 2498587 TTTGACAATTAAAAA GGAAACGAAA AATT TTTCGTTTCC CCTTTAATAATTCAT TERM 2934 2498861 - 2498895 + T 76 -4.6 -5.32565 | opp_overlap 2498863 2498868, overlap 2498863 GTGAATTACAAAATC TATTTAATAAAAAG CATGTAT CTTTTTATTAAATC TTTTTTACTTCCTTA TERM 2935 2498863 - 2498893 + T 76 -7.2 -4.27681 | opp_overlap 2498863 2498868, overlap 2498861 GAATTACAAAATCTA TTTAATAAAAAG CATGTAT CTTTTTATTAAA TCTTTTTTACTTCCT TERM 2936 2499312 - 2499276 - T 80 -5.4 -5.25803 | opp_overlap 2499280, overlap 2499280 AATTTTCACAAAAAA TAAACTATAAACAATC GCTTA AATTGTTTATAGTCTG CTTTAACTCTTTTAG TERM 2937 2499308 - 2499280 - T 95 -8.4 -5.13354 | opp_overlap 2499280, overlap 2499276 TTCACAAAAAATAAA CTATAAACAATC GCTTA AATTGTTTATAG TCTGCTTTAACTCTT CKL_2421 2500110 - 2499364 - | hypothetical protein TERM 2938 2500330 - 2500276 - R 100 -9.6 -5.16472 | opp_overlap 2500281 2500284, overlap 2500281 AAAAACTTCAAAAAA TAGAAGAACTATTACACTAACGATTT AAA AAATCGCTAACGCAATAGCTCTTTTT TACCCATATCCTCAC TERM 2939 2500325 - 2500281 - R 100 -13.9 -4.18465 | opp_overlap 2500281 2500284, overlap 2500276 CTTCAAAAAATAGAA GAACTATTACACTAACGATTT AAA AAATCGCTAACGCAATAGCTC TTTTTTACCCATATC CKL_2422 2500956 - 2500345 - | hypothetical protein CKL_2423 2501224 - 2500943 - | hypothetical protein CKL_2424 2502898 - 2501339 - | glycosyltransferase TERM 2940 2504295 - 2504285 - g 77 -4 -5.38839 | opp_overlap 2504285 TAGATAAAAATAAAA TCTT ATC AAGA GTTAGTGAATACTTT CKL_2425 2503150 - 2504676 + | hypothetical protein CKL_2426 2505888 - 2504806 - | glycosyltransferase TERM 2941 2505978 - 2505952 - R 100 -15.2 -4.0942 | opp_overlap 2505943 2505943 2505954 TATTTATTATATAAA GAGCCTTCTGCT TTA AGCGGAAGGCTC TAATACCAATTTAAA TERM 2942 2505954 - 2505976 + r 100 -14.2 -2.80307 | opp_overlap 2505952, overlap 2505943 2505943 TTTATTATATAAAGA GCCTTCTGCT TTA AGCGGAAGGC TCTAATACCAATTTA CKL_2427 2508668 - 2506119 - | hypothetical protein TERM 2943 2508070 - 2508083 + g 70 -8.1 -3.05727 | CCGGTGTCTCCTGTT GGACC TGTT GGTCC TGTGTCTCCTGTTGG TERM 2944 2509144 - 2509160 + H 70 -6.7 -4.03234 | opp_overlap 2509143 ATCAGATTATAAAGC TTTACAT TAC ATGTAAA TTTGTCTGCCAAGGA CKL_2428 2509402 - 2509890 + | transcriptional regulator CKL_2429 2510136 - 2511404 + | permease TERM 2945 2511531 - 2511563 + F 100 -12.9 -4.52142 | opp_overlap 2511525 2511531 GTGAGGAAAGATTAA CAGCCACCATTTT TGCCTAT AGAATGGTGGCTG TTTGTATTTTCTCAT TERM 2946 2511563 - 2511531 - f 90 -10.7 -3.48269 | opp_overlap 2511531, overlap 2511525 GTGAGGAAAGATTAA CAGCCACCATTTT TGCCTAT AGAATGGTGGCTG TTTGTATTTTCTCAT CKL_2430 2511898 - 2512266 + | transcriptional regulator CKL_2431 2512420 - 2512920 + | hypothetical protein CKL_2432 2513719 - 2512964 - | methyltransferase CKL_2433 2514069 - 2513749 - | hypothetical protein msrB 2514255 - 2514704 + | methionine sulfoxide reductase B CKL_2435 2514862 - 2515527 + | hypothetical protein TERM 2947 2515556 - 2515527 - T 86 -10.9 -2.8742 | opp_overlap 2515528, overlap 2515524 2515518 TCCAAATATGAACTA GGTATAGGTGATA AATT TATCACCTATACT TTACTATAACCTAAT TERM 2948 2515528 - 2515555 + T 100 -14.4 -3.83998 | opp_overlap 2515527 2515524 2515518 CCAAATATGAACTAG GTATAGGTGATA AATT TATCACCTATAC TTTACTATAACCTAA CKL_2436 2516313 - 2515567 - | transcriptional regulator CKL_2437 2516886 - 2516398 - | transcriptional regulator TERM 2949 2516607 - 2516593 - G 72 -5 -4.74504 | ATTTGAAGCCAAAAA TACAAG TAT CTCGTA CTCCTTCGAAGTTAA CKL_2438 2517570 - 2516911 - | sensory transduction histidine kinase TERM 2950 2517250 - 2517264 + g 70 -4.4 -4.91046 | opp_overlap 2517250 2517252 AACAGAATTATTATA TATTAT TTT ATAATA TTTGTTTATTTTATC TERM 2951 2517588 - 2517568 - G 71 -6.9 -4.06719 | AAAAATTACGATAAA CATATGTGA ATG TCTCATATG CCTGGATTACCATTC TERM 2952 2518284 - 2518273 - g 74 -3 -5.45802 | GTTTCAAAAGAAAAA TCTA AAGT TAGA AATGACATAGGCATA TERM 2953 2518372 - 2518347 - g 71 -2.1 -5.48825 | gap 1 GACTATTGAAAAAAA TATAAAATTGCA CTA TG-AATTCTATA ATGTTCCAAAACCTG CKL_2439 2518057 - 2518668 + | ABC transporter ATPase CKL_2440 2518798 - 2519625 + | transporter protein CKL_2441 2520399 - 2519725 - | transcriptional regulator TERM 2954 2520468 - 2520422 - H 79 -9.1 -3.33815 | gap 1, opp_overlap 2520429 2520454, overlap 2520429 2520452 ATCCTCCTTAATTAA TTTATAACAGGTACCTTTAGTA TTAT TA-TACTGGTACCTGTTATAAA TGTCAAGATATTTTT hcp 2520678 - 2522330 + | hydroxylamine reductase TERM 2955 2522389 - 2522419 + F 95 -8.4 -5.16841 | overlap 2522390 TTAGTTTTCAAGATT TGCCGTAGGATATA TTT TATATTTTACGGCC TTTTTCTTGCTCTAA TERM 2956 2522390 - 2522418 + F 95 -11.9 -3.6902 | overlap 2522389 TAGTTTTCAAGATTT GCCGTAGGATATA TTT TATATTTTACGGC CTTTTTCTTGCTCTA TERM 2957 2522502 - 2522483 - f 70 -2.2 -5.42259 | overlap 2522487 CTATTTTTAAAAAAA TTACTAAG ATTT CTTAACAA TTCACACAGAAGATA TERM 2958 2523497 - 2523466 - g 90 -12.4 -3.20662 | opp_overlap 2523464 2523488, overlap 2523463 2523459 2523456 CATAAGAATAAATGA CCTTGAGAAAATCC GCAG GGATTTCCGCAAGG AACTTATCCATATGA CKL_2443 2522618 - 2523565 + | hypothetical protein CKL_2444 2523569 - 2524132 + | hypothetical protein TERM 2959 2524162 - 2524178 + T 74 -6.6 -4.33274 | TTTCATAACACATCT GACAGT TTTCT ACTGTC TTTTCCTCATGTACC CKL_2445 2526054 - 2524306 - | transport protein, ATPase and permease component CKL_2446 2527807 - 2526047 - | transport protein, ATPase and permease component TERM 2960 2526922 - 2526897 - G 71 -7.6 -3.49102 | ATAGTTCCCATAGAA GCTATGCTGT CAGTGT ACTGCATAGC CTGTACAAGAGGTGT TERM 2961 2527895 - 2527840 - R 100 -28.3 -5.99154 | opp_overlap 2527851 TATTAAAGAAAAAAA TAGGGATATAATTCAGTATAGTTAG TTCCAT CTAACTATACTGAATTATATCCCTA TGCCCCTTATTTATC TERM 2962 2527851 - 2527884 + r 100 -14.2 -3.53722 | opp_overlap 2527840 AAAATAGGGATATAA TTCAGTATAGTTAG TTCCAT CTAACTATACTGAA TTATATCCCTATGCC CKL_2447 2528916 - 2527951 - | transcriptional regulator CKL_2448 2529938 - 2529099 - | Pirin-related protein CKL_2449 2530065 - 2530361 + | hypothetical protein TERM 2963 2530466 - 2530443 - f 90 -11 -3.3352 | overlap 2530441 2530437 TAAAATTAACTAATA CCCCCAGCTT CTTT AAGATGGGGG ATAAACACCTTATAT CKL_2450 2530883 - 2531644 + | iron-sulfur flavoprotein TERM 2964 2531808 - 2531774 - T 84 -9.5 -3.5394 | AAACTGCCTTTTAAA TGAGTTCCCATTTTT TATAT AAAATTAGGAACTCA AATACTGTAATAGAT CKL_2451 2532591 - 2531848 - | hypothetical protein TERM 2965 2532483 - 2532502 + g 71 -6.6 -4.09285 | ATATAAACATTTTAG GATTAATA AAAT TATTAATC TTTCCTGTTTTCATC CKL_2452 2534261 - 2532591 - | hypothetical protein TERM 2966 2532705 - 2532693 - G 71 -7.7 -3.55203 | opp_overlap 2532689 2532693 2532696 AAAACCTTTTTTAAA GCTTG CTC CAAGC ATTATGGTATTTTTT TERM 2967 2533267 - 2533253 - G 74 -8.6 -3.35526 | opp_overlap 2533248 2533247, overlap 2533248 CAAGCATAAATGTAA CAGCTA TAC TAGCTG GAACACCTTTTTTCA TERM 2968 2533574 - 2533562 - G 74 -4.1 -5.22289 | CATTAAAGACAAAAA GAAGT AAT ACTCC TAAAATCATATATAT CKL_2453 2535245 - 2534277 - | hypothetical protein CKL_2454 2536042 - 2535386 - | transport protein CKL_2455 2537419 - 2536067 - | transport protein CKL_2456 2538547 - 2537498 - | NADH oxidase TERM 2969 2537707 - 2537722 + g 82 -7.6 -4.6313 | opp_overlap 2537698 2537707 2537709 AATTTACTGCAATTA CAGGTA TATT TACCTG TTCTTTTATTTTAGC CKL_2457 2540305 - 2538590 - | hypothetical protein TERM 2970 2539279 - 2539267 - G 74 -5.5 -4.78572 | opp_overlap 2539267, overlap 2539262 CGTCAATCAATAAAA GTGAG GTT CCCAC TTCTAAAGCTTCCAT CKL_2458 2541195 - 2540470 - | hypothetical protein TERM 2971 2541094 - 2541115 + g 81 -4.6 -5.47218 | AGTTTGAATTCTTGC TGTATTTT TACTGT AAAATACA TTTTTTTGCGTGAAA TERM 2972 2541298 - 2541285 - R 100 -6.7 -5.63103 | GTGGAATTAAAAAAA GGTGA CCTT TCACC AACAATATAAGTTGA TERM 2973 2541330 - 2541320 - R 71 -4.6 -4.88388 | overlap 2541321 ATAAGTTGAGAAAAA CCAC CTA GCGG TAATCATACATTACT nifE1 2542590 - 2541361 - | NifE1 TERM 2974 2542095 - 2542081 - G 70 -7.1 -3.58343 | TGCATCAGCCTGAAA GCGGA ATAGA TCCGC ACAGGAACCAATAAT TERM 2975 2542339 - 2542326 - G 74 -3.1 -5.46706 | AGGGCAAAAGAAAAA TCACC TGGG GATGA TCACTTTTTACAACA nifE2 2543866 - 2542571 - | NifE2 TERM 2976 2543272 - 2543256 - G 72 -8.7 -3.15583 | GCAAGATACCTAAGA GCGAAGC TGC GCTTCAC AAGTTCCGGTAGTAG nifH3 2544618 - 2543863 - | NifH3 CKL_2462 2545555 - 2544704 - | transcriptional regulator TERM 2977 2545203 - 2545213 + g 71 -8.2 -3.2313 | overlap 2545202 AGCTCTGTTAGGCGT GGGC TTT GCCC TATATTAATTTGGAA TERM 2978 2545646 - 2545631 - R 72 -6.2 -4.28045 | opp_overlap 2545631, overlap 2545628 ACAGCAGCAAAATAA GTTAGA TGTA TCTAAC TTCAATATTATCATG sugE 2545996 - 2545676 - | SugE TERM 2979 2546063 - 2546031 - H 84 -3.5 -5.85244 | gap 1 AATCAAAATAAAAAA GCCATGGATGATAT AATAAA ATATCTCCCA-GGC TTTTATCCTTCCGTG TERM 2980 2546211 - 2546195 - H 74 -3.8 -5.31545 | AATAATAGCAAAAAA TATTGA AATAG TCAATA TCCGATCTTTTTCTA TERM 2981 2546402 - 2546446 + H 100 -4.4 -6.34424 | opp_overlap 2546403, overlap 2546403 TATAATATCTATACA ACGAGTAGTTTTGATAAC GTAAGTCCA GTTGTCAACGCTACTCGC TTTTTTTTTTGAAGG TERM 2982 2546403 - 2546445 + H 78 -7.9 -4.39028 | opp_overlap 2546403, overlap 2546402 ATAATATCTATACAA CGAGTAGTTTTGATAAC GTAAGTCCA GTTGTCAACGCTACTCG CTTTTTTTTTTGAAG TERM 2983 2547119 - 2547105 - g 71 -2.9 -5.1417 | opp_overlap 2547105 TTACAAAACCAAAAA TTGAT GTTAT ATCAA TTATACTGTCAACTA CKL_2464 2546504 - 2547919 + | efflux pump CKL_2465 2548857 - 2548105 - | hypothetical protein TERM 2984 2548558 - 2548570 + g 82 -6.3 -5.09225 | TTCAATTATGATATC TGTTG CTC CAACA TTTTTTAAATACCCT neuA 2549587 - 2548874 - | NeuA TERM 2985 2548965 - 2548942 - G 77 -7.6 -4.02534 | opp_overlap 2548942 2548944, overlap 2548944 ATTCAAATTGATAAA TATCATCTAT ATCT ATAGATGACA TTTTATCCATTATAT TERM 2986 2548963 - 2548944 - G 75 -8 -3.59995 | opp_overlap 2548944 2548942, overlap 2548942 TCAAATTGATAAATA TCATCTAT ATCT ATAGATGA CATTTTATCCATTAT TERM 2987 2548967 - 2548989 + g 76 -3.5 -5.4251 | overlap 2548968 ATCTATAGATGACAT TTTATCCAT TATAT ATGGATAAC TTTTTTCTCTATAAA CKL_2467 2550673 - 2549627 - | nucleotidyltransferase CKL_2468 2551841 - 2550690 - | hypothetical protein CKL_2469 2552549 - 2551878 - | hypothetical protein TERM 2988 2551981 - 2551997 + g 80 -9.5 -3.54879 | overlap 2551957 2551979 ACATCCACAGATCTT GGAAAAG GTG CTTTTCC TATTTCACTTTTAAA CKL_2470 2553717 - 2552542 - | polysialic acid biosynthesis protein CKL_2471 2554654 - 2553707 - | hypothetical protein CKL_2472 2555672 - 2554674 - | polysaccharide biosynthesis protein CKL_2473 2556306 - 2555665 - | Serine acetyltransferase-related protein rfbB 2557350 - 2556364 - | hypothetical protein CKL_2475 2557638 - 2557381 - | hypothetical protein CKL_2476 2558078 - 2557656 - | hypothetical protein CKL_2477 2558341 - 2558015 - | hypothetical protein CKL_2478 2558504 - 2558334 - | hypothetical protein CKL_2479 2560272 - 2558554 - | hypothetical protein TERM 2989 2560363 - 2560409 + r 72 -6.1 -4.35874 | gap 1, opp_overlap 2560367, overlap 2560365 2560367 CCGATAATATAATAG AAAAGCTGTCCAAAAATAAACT TTAA AGTT-ATTTTGGGACAGCTGTA TTTTAAATTATATTG TERM 2990 2560365 - 2560407 + r 78 -8.7 -3.76769 | gap 1, opp_overlap 2560367, overlap 2560363 2560367 GATAATATAATAGAA AAGCTGTCCAAAAATAAACT TTAA AGTT-ATTTTGGGACAGCTG TATTTTAAATTATAT TERM 2991 2560405 - 2560367 - R 100 -11.3 -4.79373 | gap 1, opp_overlap 2560365 2560363 2560367 TAATATAATAGAAAA GCTGTCCAAAAATAAACT TTAA AGTT-ATTTTGGGACAGC TGTATTTTAAATTAT TERM 2992 2560367 - 2560405 + r 93 -11.3 -3.45395 | gap 1, opp_overlap 2560367, overlap 2560365 2560363 TAATATAATAGAAAA GCTGTCCAAAAATAAACT TTAA AGTT-ATTTTGGGACAGC TGTATTTTAAATTAT CKL_2480 2560745 - 2560458 - | hypothetical protein CKL_2481 2561129 - 2560830 - | hypothetical protein CKL_2482 2562396 - 2561221 - | cyclopropane-fatty-acyl-phospholipid synthase-related protein CKL_2483 2562919 - 2562479 - | transcriptional regulator TERM 2993 2563260 - 2563282 + r 87 -11.2 -2.56596 | opp_overlap 2563252 2563273, overlap 2563256 TGATAAACCTCAGGG ATCCGGGGAC AGA GTCCCCGGGG TACATTGCTAACAGG CKL_2484 2565077 - 2563416 - | methyl accepting chemotaxis protein TERM 2994 2564574 - 2564562 - G 76 -3.3 -5.33785 | opp_overlap 2564562 AATTATGATAAAAAA GGTCA TTT TGTCC ATCTCTTTAAAGATT TERM 2995 2564860 - 2564873 + g 72 -2.5 -5.40474 | AAGCTATAGCCTGAA TTAAA AACT TTTAA TTTTTTTACAAGGCT CKL_2485 2565662 - 2565147 - | methyl accepting chemotaxis protein TERM 2996 2566014 - 2565989 - R 84 -5.6 -5.27335 | gap 1, opp_overlap 2565992 2565996 TTTCTGAAATAAAAA TAAGCACCCTA AAAAA TA-GGTGCTTA ACTTTTAATAACATT CKL_2486 2567161 - 2566397 - | hypothetical protein TERM 2997 2566702 - 2566691 - G 74 -2.2 -5.57888 | ACCAAAAAAATAAAA GCTA AAGA CAGC CAAAAATAAACCTGT CKL_2487 2568072 - 2567158 - | ABC transporter ATPase CKL_2488 2568275 - 2568072 - | hypothetical protein CKL_2489 2569393 - 2568275 - | transcriptional regulator TERM 2998 2569531 - 2569505 - R 75 -7.2 -4.07618 | opp_overlap 2569505 CCTTCAATAATTAAA GCCCTGCTTCTC TTG GTTAAGCAAGGC TGATATAAATATCTT CKL_2490 2570511 - 2569780 - | ABC transporter permease CKL_2491 2571236 - 2570511 - | ABC transporter ATPase TERM 2999 2571004 - 2570978 - G 74 -8.8 -3.26473 | opp_overlap 2570978, overlap 2570979 TCAAATTAGGAGCAA CCGCTGTTTC CTGCGGT GAAACAGCGA TCATTGACTTTACCG TERM 3000 2571003 - 2570979 - G 77 -10.1 -2.55402 | opp_overlap 2570978, overlap 2570978 CAAATTAGGAGCAAC CGCTGTTTC CTGCGGT GAAACAGCG ATCATTGACTTTACC CKL_2492 2571806 - 2571237 - | hypothetical protein CKL_2493 2572070 - 2571879 - | hypothetical protein TERM 3001 2572030 - 2572077 + g 77 -8.5 -3.65201 | gap 1 ATCAAGTGATTCTTA GGTTCAGGTGGAG-TTTGCTGT AGAGA ACTGCTTATCTCCATCTGAACC TTATTAACAGTATTC TERM 3002 2572389 - 2572367 - R 70 -2.1 -5.4251 | gap 1, opp_overlap 2572369, overlap 2572368 2572369 TGGATACATAAAAAA TGGCCAAGTT ATAG AACTTGAC-A TTATAGATGTGAAAC CKL_2494 2573058 - 2572492 - | transcriptional regulator TERM 3003 2573791 - 2573801 + G 74 -4 -5.24531 | AAGAAAACTTTAGTT TACA AAA TGTA TTTTTTATAACAGGT CKL_2495 2573304 - 2574494 + | permease phzA 2574612 - 2575196 + | PhzA TERM 3004 2575326 - 2575380 + T 72 -6.9 -4.21922 | CTCTACAACTTTGAA TTGGGAATAAATGTGATATTT ATTCTAAACATTA AAATATCATATTTACTCCCAA TTTGATTTTCAATAA CKL_2497 2576193 - 2575402 - | ABC transporter ATPase CKL_2498 2576996 - 2576199 - | permease TERM 3005 2576816 - 2576865 + g 88 -3.3 -6.02914 | gap 1, opp_overlap 2576822, overlap 2576828 2576832 TAGAAACTAACAATA TAAGTATAAATGTAAATGTGACTT TCA AGGTTACATTTAT-TTTAAATTTA TTTTTTTTATATCCG TERM 3006 2576828 - 2576854 + g 85 -8.2 -4.46617 | opp_overlap 2576822, overlap 2576816 2576832 ATATAAGTATAAATG TAAATGTGACTT TCA AGGTTACATTTA TTTTAAATTTATTTT TERM 3007 2576832 - 2576850 + g 70 -4.6 -4.74598 | opp_overlap 2576822, overlap 2576828 2576816 AAGTATAAATGTAAA TGTGACTT TCA AGGTTACA TTTATTTTAAATTTA CKL_2499 2578018 - 2577002 - | cobalt transport protein CbiM TERM 3008 2577326 - 2577338 + g 70 -6.3 -4.22009 | opp_overlap 2577324 AACAATTAATCCATA GACAA TTT TTGTC TTTCTCTTGGCTCCT TERM 3009 2577680 - 2577666 - G 93 -8.6 -4.85618 | opp_overlap 2577665 AAATAACCAAGAAAA GGCATT ATA AATGCC ATATTAAAGCAATTA CKL_2500 2579807 - 2578164 - | hypothetical protein CKL_2501 2580735 - 2579911 - | hypothetical protein TERM 3010 2580077 - 2580049 - G 74 -3.9 -5.27779 | TTCAATATCAAAAAA TTTAACTCTCTCC TCA GGAGAAACTTCAA TTCTAGCTATTTCTC CKL_2502 2581394 - 2581020 - | transcriptional regulator CKL_2503 2581475 - 2581843 + | decarboxylase TERM 3011 2581844 - 2581896 + T 84 -11 -2.64962 | opp_overlap 2581852, overlap 2581852 TTTCTAAATAGCTAA TAAAGAAATAAGAGCCTAAATTCT CTATA AGAATCTAGGTTCTTATTTTTATA GATTTTTAAGATTTT TERM 3012 2581852 - 2581888 + T 100 -10.4 -4.98758 | opp_overlap 2581852, overlap 2581844 TAGCTAATAAAGAAA TAAGAGCCTAAATTCT CTATA AGAATCTAGGTTCTTA TTTTTATAGATTTTT TERM 3013 2581888 - 2581852 - T 100 -11.1 -4.69214 | opp_overlap 2581852 2581844 TAGCTAATAAAGAAA TAAGAGCCTAAATTCTC TAT AAGAATCTAGGTTCTTA TTTTTATAGATTTTT CKL_2504 2582432 - 2582178 - | hypothetical protein CKL_2505 2583799 - 2582651 - | ABC transporter solute-binding protein TERM 3014 2583665 - 2583678 + g 77 -3.9 -5.48213 | AACTTTTCTGCCTGC CATAT CAGT ATATG TTTTTGTTTTAGCTG CKL_2506 2584991 - 2583828 - | ABC transporter solute-binding protein CKL_2507 2585819 - 2585019 - | ABC transporter ATP-binding protein CKL_2508 2586882 - 2585827 - | ABC transporter permease CKL_2509 2588091 - 2586913 - | iron-molybdenum cofactor biosynthesis protein CKL_2510 2589566 - 2588088 - | nitrogenase associated protein TERM 3015 2589364 - 2589376 + g 81 -9.1 -3.79113 | CATTTTAGGTTATAT GCTGG CTT CCAGC TTCTTCTGCAAACAT TERM 3016 2589828 - 2589855 + r 83 -8.6 -4.4084 | opp_overlap 2589828 TTTGAACATAAAAAA CTAGCTTAATAT CAGT ATACTAAGCTAG TTTTACTCTATAATT TERM 3017 2589855 - 2589828 - R 100 -10.8 -5.47159 | opp_overlap 2589828 TTTGAACATAAAAAA CTAGCTTAATAT CAGT ATACTAAGCTAG TTTTACTCTATAATT CKL_2511 2590735 - 2589917 - | hypothetical protein TERM 3018 2590069 - 2590079 + g 81 -4 -5.64006 | GCATATTATTCTTAA GATA TAC TATC TTTTTTTGATTAAAT TERM 3019 2590494 - 2590515 + g 100 -13.1 -3.05596 | TCTGCTTCCTTAGTA GGGCAAAGT ATAT ACTTTGCCC TTGAGTCCGCCCATA TERM 3020 2590672 - 2590682 + g 74 -5.4 -4.77438 | overlap 2590658 TCTCCTTCAGCAATT GAAG CAG CTTC TTTTTAATGATCCAT CKL_2512 2591977 - 2591279 - | phosphatase CKL_2513 2592848 - 2592006 - | hypothetical protein TERM 3021 2592237 - 2592251 + g 72 -2.8 -5.42259 | CATCAGACACCTTTT TAACGT ACC ACGGTA TTTTTTTCCAACTCG CKL_2514 2593999 - 2593433 - | hypothetical protein CKL_2515 2594447 - 2594022 - | hypothetical protein CKL_2516 2595102 - 2594515 - | transcriptional regulator TERM 3022 2594752 - 2594768 + g 71 -5.2 -4.57063 | AACACAATCAAATCC GTTTTC CTCAC GAAAAC TTTGTTCTATTTTAC TERM 3023 2595159 - 2595188 + r 73 -8.1 -3.33492 | opp_overlap 2595159 GTATTCGCGTAATAA TATGAATGAATAT TTTT AAATTCATTCATA TTCTAACATAAGTAA TERM 3024 2595188 - 2595159 - R 74 -8.1 -3.62046 | opp_overlap 2595159 GTATTCGCGTAATAA TATGAATGAATAT TTTT AAATTCATTCATA TTCTAACATAAGTAA TERM 3025 2595358 - 2595328 - R 70 -8.4 -2.75769 | opp_overlap 2595328, overlap 2595327 2595324 CCCCTAAAGGATAAC GTATTCTAAGTGCT AAA AACACCAAGAATAC TGTTAATAAGGTTCA CKL_2517 2596661 - 2595441 - | transporter protein TERM 3026 2595700 - 2595684 - G 74 -7.3 -4.08064 | opp_overlap 2595684 AACGCCGCTGTAAAA TGGAACT GAA AGTCCCA TAATTCCACAACACA TERM 3027 2596193 - 2596183 - G 83 -4.6 -5.53436 | ACAGAATATAAAAAA GCCG CAG CAGC TGGACTAAGAATGTA TERM 3028 2596757 - 2596721 - R 100 -10.9 -5.4833 | opp_overlap 2596734 TTAGGCAATAAAAAA TGCAGGCTAAAATCCGC AAT GCGAGCTTTAGTCTGCA TACCAACGTTAAAAA CKL_2518 2597698 - 2597291 - | hypothetical protein TERM 3029 2597939 - 2597913 - R 100 -5.2 -5.95539 | opp_overlap 2597916, overlap 2597916 CTTGAAATAAAAAAA TAAGTACCAAAA CAT TGTTGGTACTTT CATATAAGTGAGATT TERM 3030 2597936 - 2597916 - R 84 -6.9 -5.01858 | opp_overlap 2597916, overlap 2597913 GAAATAAAAAAATAA GTACCAAAA CAT TGTTGGTAC TTTCATATAAGTGAG TERM 3031 2598102 - 2598144 + r 88 -6.6 -5.19879 | gap 1, opp_overlap 2598110, overlap 2598103 TTAAATATATGTTAA TGTAAAAATAAGCA-CCTA TTCATT TAGGATGCTTATTTTAACG TTTTTCTATTTCAAG TERM 3032 2598103 - 2598143 + r 73 -7.9 -3.70843 | gap 1, opp_overlap 2598110, overlap 2598102 TAAATATATGTTAAT GTAAAAATAAGCA-CCTA TTCATT TAGGATGCTTATTTTAAC GTTTTTCTATTTCAA TERM 3033 2598364 - 2598327 - R 75 -8.7 -3.41366 | opp_overlap 2598327 2598333 2598357, overlap 2598333 GTATGTTAAAAGATA TAAAAATAAGCACTC TAAATGAC GAGCGCTTATTTTCA ATATTATTCTATTTT TERM 3034 2598358 - 2598333 - R 77 -5.5 -5.186 | opp_overlap 2598333 2598327 2598357, overlap 2598327 TAAAAGATATAAAAA TAAGCACTC TAAATGAC GAGCGCTTA TTTTCAATATTATTC CKL_2519 2598711 - 2598493 - | hypothetical protein TERM 3035 2598569 - 2598579 + g 78 -6.8 -4.46404 | opp_overlap 2598569 2598568 TCAAATATAATCAAT CCTG GAT CAGG TTTTGGTATTACTTC TERM 3036 2598884 - 2598861 - R 73 -5.3 -4.78029 | opp_overlap 2598861 TGAATAAAATGAAAA TAGGCACTG TCCAAG CATTGCCTA TTTCTGACATATATA CKL_2520 2599100 - 2598918 - | hypothetical protein CKL_2521 2600124 - 2599201 - | regulatory protein TERM 3037 2600104 - 2600126 + g 87 -10.8 -3.52475 | opp_overlap 2600118 CAATCTAATCATTCC TTTTGTTGAT ATT ATCAACAAAA TTATACTCTATTGAG CKL_2522 2601115 - 2600390 - | hypothetical protein CKL_2523 2601645 - 2601316 - | hypothetical protein CKL_2524 2602250 - 2601714 - | transcriptional regulator TERM 3038 2601907 - 2601920 + g 71 -8.1 -3.36694 | overlap 2601905 TCATTAATATTCACT GCTGC TAAA GCAGC TGTTTCAGGCTCAAT CKL_2525 2602976 - 2602272 - | hypothetical protein CKL_2526 2603322 - 2602969 - | hypothetical protein TERM 3039 2603346 - 2603376 + H 73 -7.8 -3.86202 | opp_overlap 2603346 2603347 2603351, overlap 2603351 TCCGCCTTTCTACAA TTCAATTGGTATTA TGG TAATACCAATTAAG TTTAGTATACTACCC TERM 3040 2603375 - 2603347 - H 87 -11.3 -2.57132 | opp_overlap 2603346 2603351, overlap 2603346 2603351 CCGCCTTTCTACAAT TCAATTGGTATTA TGG TAATACCAATTAA GTTTAGTATACTACC TERM 3041 2603371 - 2603351 - H 83 -9.9 -3.23274 | opp_overlap 2603351 2603346, overlap 2603347 2603346 CTTTCTACAATTCAA TTGGTATTA TGG TAATACCAA TTAAGTTTAGTATAC TERM 3042 2603351 - 2603371 + H 83 -9.9 -3.32159 | opp_overlap 2603347 2603346 2603351, overlap 2603346 CTTTCTACAATTCAA TTGGTATTA TGG TAATACCAA TTAAGTTTAGTATAC TERM 3043 2604288 - 2604274 - g 72 -5.8 -4.4009 | GTCCATGGCAGAAAA GATTTT GAC AAAATC TCCAGTAGGCACCCG crt2 2603684 - 2604457 + | Crt2 TERM 3044 2604524 - 2604492 - f 71 -8.1 -3.14839 | opp_overlap 2604492 2604497, overlap 2604490 2604497 2604517 TATATAGATCCAAGA TTAAATTAATTCT ATTTTTA AGAATTAATTTAA TTATTACCTCTAATT TERM 3045 2604492 - 2604524 + F 76 -8.1 -3.71888 | opp_overlap 2604492 2604490 2604497 2604517, overlap 2604497 TATATAGATCCAAGA TTAAATTAATTCT ATTTTTA AGAATTAATTTAA TTATTACCTCTAATT CKL_2528 2604608 - 2604811 + | small acid-soluble spore protein TERM 3046 2604888 - 2604867 - T 72 -7.3 -4.05678 | opp_overlap 2604866 2604869, overlap 2604865 TTTGTAAATAAAATA GACACCC TAAATAAC GGGTGTC ACTTTGTGATAAAAG CKL_2529 2607488 - 2605245 - | helicase TERM 3047 2606547 - 2606527 - G 80 -9.1 -3.61398 | opp_overlap 2606520 2606526 CTCTTTTGGTAAGAA TCTTGCTTC TTA GAAACAAGA ATATATTCCATCATC TERM 3048 2607653 - 2607676 + r 91 -8.2 -4.95758 | opp_overlap 2607653 TTATGTCAATGTAAA GACATTTGTC ATTG GGCAAGTGTC TTTTTGTAGTGTAAT CKL_2530 2608583 - 2607903 - | transcriptional regulator CKL_2531 2609710 - 2608598 - | hypothetical protein TERM 3049 2608873 - 2608854 - G 72 -3.6 -5.28983 | opp_overlap 2608854, overlap 2608848 2608846 CCCAAAATAGAAAAA CTAGTTAA CAGC TTAACAAG TTTTGCCACATAGCC TERM 3050 2609763 - 2609727 - H 74 -8.3 -3.63895 | opp_overlap 2609727 2609730 2609761, overlap 2609730 2609761 GGCAACCACCTCAAA GCATTTATATGAACGAA TAA TTCATTCATATAAATAA TATCATTATAATTTT TERM 3051 2609760 - 2609730 - H 93 -12.2 -2.93357 | opp_overlap 2609727 2609730, overlap 2609727 AACCACCTCAAAGCA TTTATATGAACGAA TAA TTCATTCATATAAA TAATATCATTATAAT TERM 3052 2609730 - 2609760 + H 78 -10 -2.72031 | opp_overlap 2609730 2609727, overlap 2609727 AACCACCTCAAAGCA TTTATATGAACGAA TAA TTCATTCATATAAA TAATATCATTATAAT CKL_2532 2609950 - 2610279 + | hypothetical protein TERM 3053 2610332 - 2610307 - T 77 -5.5 -5.06414 | opp_overlap 2610307 TTCCTGTAATAAAAA TAAGCACCC TAAATAAC GGATGCTTA TTTTTAACAATATTA arsC 2611322 - 2610912 - | ArsC CKL_2534 2612399 - 2611341 - | heavy metal resistance protein CKL_2535 2612794 - 2612411 - | transcriptional regulator CKL_2536 2613805 - 2613185 - | acetyltransferase CKL_2537 2615214 - 2613853 - | transport protein TERM 3054 2615169 - 2615186 + g 89 -8.5 -4.7254 | opp_overlap 2615169 TTAATTCCCTCAAAA GTACCTT GAGT AAGGTAC TTTTTCCTGCACCAT TERM 3055 2615186 - 2615169 - G 82 -8.5 -4.09739 | opp_overlap 2615169 TTAATTCCCTCAAAA GTACCTT GAGT AAGGTAC TTTTTCCTGCACCAT TERM 3056 2615359 - 2615378 + r 100 -13.6 -3.53012 | opp_overlap 2615371 2615372 TTTTCATTTACCTGT TCGCAGGG AAAA CCCTGCGA TTTAAGCAGGAAGGA TERM 3057 2615562 - 2615532 - R 100 -9.8 -5.16572 | opp_overlap 2615532 ATTCAACGTAAAAAA GGCTGCAAATGAAC ATA ATTCACCTGCAACC CTTATATCTCTATAA TERM 3058 2615966 - 2615956 - R 76 -4 -5.52384 | TCTTCATGAAAAAAA TTGA CCC TCAA ATTCAATTTTATCGG CKL_2538 2616953 - 2616228 - | hypothetical protein CKL_2539 2617483 - 2617154 - | hypothetical protein CKL_2540 2618152 - 2617808 - | hypothetical protein CKL_2541 2619188 - 2618178 - | hypothetical protein CKL_2542 2619543 - 2619181 - | transcriptional regulator TERM 3059 2619348 - 2619358 + g 71 -6.8 -4.07568 | CCCAGTTACTGCGCA GCAG CTC CTGC TTTTCCAAACGACGG TERM 3060 2619542 - 2619525 - G 75 -4.9 -5.03145 | opp_overlap 2619525, overlap 2619527 TAAGGCTTGAAAAAA TATCTGA CTGA TCAGACA TACTATCACCTCTGC CKL_2543 2620375 - 2620097 - | hypothetical protein CKL_2544 2620421 - 2620849 + | hypothetical protein CKL_2545 2622083 - 2621199 - | hypothetical protein CKL_2546 2623323 - 2622097 - | hypothetical protein TERM 3061 2622403 - 2622417 + g 74 -8.6 -3.34715 | overlap 2622397 2622402 ATCCACACCGGCATC GTGAAG TGC CTTCAC TGTTTCCAAAAGATA TERM 3062 2623027 - 2623041 + g 100 -10 -5.38321 | ATCAGCTATATCTCT GCGCTT ATC AAGCGC TTTTTTCTGCTCTTT CKL_2547 2624547 - 2623492 - | two component sensor kinase TERM 3063 2624312 - 2624327 + g 76 -3.3 -5.42259 | AATACTTGAGAGCGT GAAAG ATCAAA CTTTC TTTTTTTACGGGTGA CKL_2548 2625221 - 2624544 - | transcriptional regulator CKL_2549 2625953 - 2625435 - | transcriptional regulator CKL_2550 2626369 - 2626025 - | hypothetical protein CKL_2551 2626830 - 2626468 - | hypothetical protein TERM 3064 2626547 - 2626527 - G 71 -5.5 -4.54727 | opp_overlap 2626529, overlap 2626529 TTTCTGAAATGAAAA CACCAATTA AAA TAACTGGTA CTATTCCAATAGATA CKL_2552 2627859 - 2627017 - | hypothetical protein CKL_2553 2628783 - 2627980 - | esterase CKL_2554 2629529 - 2629200 - | nitroreductase-related protein CKL_2555 2629732 - 2629526 - | nitroreductase-related protein CKL_2556 2630183 - 2629935 - | hypothetical protein CKL_2557 2631980 - 2630442 - | hypothetical protein TERM 3065 2632108 - 2632139 + r 100 -9.7 -5.24449 | opp_overlap 2632114 TTTTAGTTTAGTTTA TTAAAATGCACTT ATGCCA GAGTGCATTTTAA TTTTTTGAGTTTCTA CKL_2558 2632321 - 2632136 - | hypothetical protein TERM 3066 2632743 - 2632702 - R 73 -4.5 -5.14698 | overlap 2632705 AAATCGAAAATAAAA TAACTTTGAGACCTGATGA AATA TCATCCGATACCAAAGTAA ACATAAACAGAGTTC TERM 3067 2632740 - 2632705 - R 77 -6.2 -4.6313 | overlap 2632702 TCGAAAATAAAATAA CTTTGAGACCTGATGA AATA TCATCCGATACCAAAG TAAACATAAACAGAG TERM 3068 2632803 - 2632753 - R 76 -8.3 -3.79096 | opp_overlap 2632763, overlap 2632751 2632756 AAGTAAACATAAACA GAGTTCTTTGCTTCAGGTGGGGT TTTTG ACGCCACCTGAAGTTTAGAAATC GTTATCCAGGGGCAT TERM 3069 2632800 - 2632756 - R 70 -8.6 -2.66288 | opp_overlap 2632763, overlap 2632753 2632751 TAAACATAAACAGAG TTCTTTGCTTCAGGTGGGGT TTTTG ACGCCACCTGAAGTTTAGAA ATCGTTATCCAGGGG TERM 3070 2632763 - 2632793 + r 100 -14.8 -3.59583 | opp_overlap 2632756 2632753 2632751 AAACAGAGTTCTTTG CTTCAGGTGGGGTT TTT GACGCCACCTGAAG TTTAGAAATCGTTAT TERM 3071 2632813 - 2632826 + r 74 -8.1 -3.62384 | GAAATCGTTATCCAG GGGCA TAGC TGCCC TTATCTGTCACTTGT TERM 3072 2632979 - 2632947 - R 75 -3.7 -5.43866 | gap 1, opp_overlap 2632947 2632977 TAATTCTGAAAAAAA TAATAGATAG-CCT TTCCCG AGATCTATCTATTA TCTGTAACATATAAA CKL_2559 2636063 - 2633157 - | helicase TERM 3073 2634239 - 2634251 + g 74 -5.5 -4.77567 | overlap 2634238 GCATAAATATTATAG GATGG TGT CCGTC TTTTCTTATCGGAGT TERM 3074 2634353 - 2634328 - G 79 -6.9 -4.67641 | AGTTCAAAATTAAAA GCTGATGCATG GTGG CATTCATCAAC TAAAACCATTCCATA CKL_2560 2636793 - 2636188 - | hypothetical protein CKL_2561 2637385 - 2636930 - | hypothetical protein CKL_2562 2638092 - 2637382 - | hypothetical protein TERM 3075 2637441 - 2637426 - G 85 -6.8 -4.98911 | opp_overlap 2637426 CATTATAAAAAGAAA CCTGCA AATT CGCAGG TTCACTAAAATCATC CKL_2563 2638834 - 2638403 - | hypothetical protein TERM 3076 2638923 - 2638901 - R 95 -7.8 -5.48787 | opp_overlap 2638901 2638903 2638904 2638906, overlap 2638903 2638904 ATAATATACAAAAAA CACCAGAGAT CTA ATCTCTGATA TTTTTAGCCCCTGTT TERM 3077 2638921 - 2638903 - R 81 -8.2 -4.35708 | opp_overlap 2638901 2638903 2638904 2638906, overlap 2638901 2638904 AATATACAAAAAACA CCAGAGAT CTA ATCTCTGA TATTTTTAGCCCCTG TERM 3078 2638920 - 2638904 - R 79 -9.5 -3.18985 | opp_overlap 2638903 2638901 2638904 2638906, overlap 2638903 2638901 ATATACAAAAAACAC CAGAGAT CTA ATCTCTG ATATTTTTAGCCCCT TERM 3079 2638904 - 2638920 + r 77 -9.5 -2.93975 | opp_overlap 2638904 2638903 2638901, overlap 2638903 2638901 2638906 ATATACAAAAAACAC CAGAGAT CTA ATCTCTG ATATTTTTAGCCCCT CKL_2564 2639071 - 2638937 - | Type III restriction-modification system CKL_2565 2640981 - 2639116 - | hypothetical protein TERM 3080 2639629 - 2639652 + g 78 -9 -3.37879 | overlap 2639630 TTTTGATGACACACT TTTGAAAGAG TCCC CTCTTTCAAG TTCATTGACGTTAAT TERM 3081 2639630 - 2639651 + g 80 -10.3 -2.62246 | overlap 2639629 TTTGATGACACACTT TTGAAAGAG TCCC CTCTTTCAA GTTCATTGACGTTAA TERM 3082 2640791 - 2640801 + g 76 -5.4 -5.02231 | AGTGTCTTTATTCCT CTGT AAA ACAG TTTTTCCTCTTTTTC CKL_2566 2642175 - 2640988 - | hypothetical protein CKL_2567 2642494 - 2642282 - | transcriptional regulator CKL_2568 2642981 - 2642505 - | hypothetical protein TERM 3083 2642875 - 2642888 + g 70 -8.1 -3.01712 | TTGGGATAATGTTCT GCTGC TCCA GCAGC TATTGCAGGAAGCCA TERM 3084 2642919 - 2642909 - G 80 -5.4 -5.17576 | CAGGAAGCCAAAAAA TGCA CAA TGCA AGTACTATAATTCCA TERM 3085 2643057 - 2643034 - R 91 -8.2 -5.00895 | opp_overlap 2643034 TTGAGGAGATAAAAA GCATCCAAGT TTTA ACCTAGATGC CTTTGTATAAGTAAC CKL_2569 2643620 - 2643336 - | hypothetical protein CKL_2570 2644631 - 2643771 - | phosphoenolpyruvate synthase-related protein TERM 3086 2644155 - 2644145 - GR 73 -8.2 -3.35438 | opp_overlap 2644144 2644142 2644141 2644145 CATCAGAGGTGATAA CCCG AGG CGGG GTTAGTTTTTCATAT TERM 3087 2644203 - 2644214 + gr 74 -5.8 -4.58085 | TCGCCTTTCTATGAT CTGG TAAT CCAG TTTATTTGTGCATAT CKL_2571 2645776 - 2644559 - | phosphoenolpyruvate synthase-related protein CKL_2572 2646542 - 2645973 - | transcriptional regulator TERM 3088 2646571 - 2646594 + H 75 -7.6 -3.89787 | overlap 2646572 CTTTGCAGATTTATT TTTTTGTCTA AAAT TAGACAAAAG TCTTTATTTGATTCT TERM 3089 2646572 - 2646593 + H 74 -8.9 -2.92246 | overlap 2646571 TTTGCAGATTTATTT TTTTGTCTA AAAT TAGACAAAA GTCTTTATTTGATTC TERM 3090 2646608 - 2646629 + H 70 -6.7 -3.98236 | gap 1 AGTCTTTATTTGATT CTTGATATGC TTT GCAT-TCAAG TTTATCATAGAATTT TERM 3091 2648212 - 2648180 - g 83 -10.6 -3.33162 | overlap 2648184 CACCCTATTGGAGAA GGAAGCTGCACCTG GCGGG CAGCTGCAGCTTGC AAAGATGCCGCCGTA TERM 3092 2648208 - 2648184 - g 84 -10 -3.45118 | overlap 2648180 CTATTGGAGAAGGAA GCTGCACCTG GCGGG CAGCTGCAGC TTGCAAAGATGCCGC TERM 3093 2648358 - 2648374 + G 77 -10.1 -2.72263 | overlap 2648357 TATGCGGTAATCGTC GCCGCAG GGG CTGTGGC ATTTAAGCCAGGTAT CKL_2573 2646765 - 2648879 + | enoate reductase CKL_2574 2648899 - 2649636 + | hypothetical protein TERM 3094 2649716 - 2649696 - g 74 -9.7 -2.74122 | overlap 2649695 2649693 TTGTATGAGAAATAT CGGGTAACA AAG TGTTTCCCG GTGGAGGATAGTTGT CKL_2575 2649669 - 2649890 + | hypothetical protein TERM 3095 2650242 - 2650230 - g 75 -4.9 -5.11112 | overlap 2650232 2650241 AAATTTGAAGAAAAA GATTT GGA AAATC AGATTAATATGATTA TERM 3096 2650263 - 2650241 - g 87 -8.6 -4.16146 | opp_overlap 2650244, overlap 2650230 2650232 AAAAGATTTGGAAAA TCAGATTAAT ATG ATTAACCTGA ATTCCAAGGGATGTG CKL_2576 2649936 - 2650694 + | dehydrogenase TERM 3097 2651071 - 2651048 - T 78 -8.9 -3.18023 | opp_overlap 2651047 2651048, overlap 2651046 AAAAAAAGGAAACCA GCGGCTTTA GCTGTT CAAAGCCGC CTTTACCGATATAAA CKL_2577 2652624 - 2651143 - | methyltransferase CKL_2578 2653722 - 2652955 - | hypothetical protein TERM 3098 2653395 - 2653405 + g 79 -6.8 -4.72272 | TAAACCTGCCATTTA GGGA CAA TCCC TTTTTACTCAGAAAC CKL_2579 2654679 - 2653888 - | dehydrogenase CKL_2580 2658392 - 2654835 - | hypothetical protein CKL_2581 2660850 - 2658382 - | hypothetical protein TERM 3099 2658690 - 2658669 - G 74 -2.9 -5.47964 | overlap 2658670 ATAAAACAAGAAAAA TGGAGATGA TTGT TCCTCTCCC AAGGCAGTTTCCTAC TERM 3100 2661025 - 2661006 - R 70 -8 -3.05194 | opp_overlap 2661006 2661010, overlap 2661005 AATCAAATAAAAGAT TTTGTCTA TATT TAGACAAA TTATACTAATTTGCA TERM 3101 2661006 - 2661025 + r 73 -8 -3.49924 | opp_overlap 2661006 2661005, overlap 2661010 AATCAAATAAAAGAT TTTGTCTA TATT TAGACAAA TTATACTAATTTGCA TERM 3102 2661010 - 2661049 + r 95 -9 -4.82901 | gap 1, opp_overlap 2661006 2661005 2661046, overlap 2661006 AAATAAAAGATTTTG TCTATATTTAGACAAATTA TAC TAATTTG-CAAAATATAGA TTTTTCTAAACCCGA CKL_2582 2662300 - 2661320 - | esterase TERM 3103 2661384 - 2661357 - G 81 -9.9 -3.05343 | TCTATAGTCTTAACA GCATTCCTACC TTCACT GGTGGGAATGC ACGGATAAACATGAT TERM 3104 2662494 - 2662481 - R 78 -2.5 -5.77853 | opp_overlap 2662486, overlap 2662484 2662486 AAGCCTCAAAAAAAA TATTA TGTC TAATA TTAGACATTCTAGAT TERM 3105 2662571 - 2662539 - R 71 -7.9 -3.64541 | overlap 2662537 CGATGAAAGGAAAGA GGAAAGTTTGC TTATTTTAATT GCAAACTTTCC TTGCAGATAACTATT CKL_2583 2663800 - 2662871 - | transcriptional regulator CKL_2584 2664955 - 2663831 - | hypothetical protein TERM 3106 2665080 - 2665053 - R 71 -4.2 -5.05079 | ATAACTACATAAAAA CCAGCTCAATAT CAAC ATACCAAGCTAG TTTCACTTTAGAATT CKL_2585 2665387 - 2665217 - | hypothetical protein CKL_2586 2666208 - 2665741 - | transcriptional regulator TERM 3107 2665936 - 2665947 + g 77 -4.4 -5.26316 | AGGATTTTTCCGAAT GGTT ACAA AACC TTTTTTCTCCAGTGA CKL_2587 2666308 - 2666502 + | hypothetical protein CKL_2588 2666487 - 2667197 + | hypothetical protein TERM 3108 2667205 - 2667190 - T 78 -2.6 -5.77988 | overlap 2667191 ACACATATAAAAAAA CGATTT AGTT AAATCA AAGCATTTTCATAGC CKL_2589 2668871 - 2667534 - | transporter protein TERM 3109 2667774 - 2667764 - GT 74 -6.8 -4.19177 | ATTCCGGAACATAAA TGGC AAG GCCA AGTGTAAGAAGTATA CKL_2590 2669040 - 2668846 - | hypothetical protein TERM 3110 2668994 - 2668967 - GR 89 -6.4 -5.4111 | AACAAGCATAAAAAA TAGACCTTCC CATGGGGC GAAAGGTCTA TCGCGGTACCATCCA TERM 3111 2669043 - 2669032 - GR 70 -5.8 -4.30995 | overlap 2669029 TTCTTTATAAAATAA CGGA TTCA TCCG ATACAGTCTACTTGT CKL_2591 2669572 - 2669279 - | hypothetical protein CKL_2592 2670052 - 2669696 - | hypothetical protein TERM 3112 2670069 - 2670079 + r 80 -5.4 -5.23765 | AGCTATCATCCCTTT CCAA TAA TTGG TTTTTATCTTATTTC CKL_2593 2670828 - 2670088 - | transcriptional regulator TERM 3113 2672389 - 2672364 - g 86 -9.9 -3.6135 | opp_overlap 2672370, overlap 2672366 AAATAGACTGGCAAA CAGTAATTCAG TTTT CTGAATTACTA AATGGATTGCCGGAA TERM 3114 2672387 - 2672366 - g 85 -10.3 -3.37755 | opp_overlap 2672370, overlap 2672364 ATAGACTGGCAAACA GTAATTCAG TTTT CTGAATTAC TAAATGGATTGCCGG CKL_2594 2671760 - 2672686 + | integrase-related protein CKL_2595 2673831 - 2672683 - | Type I restriction enzyme, specificity subunit CKL_2596 2677115 - 2673906 - | Type I restriction enzyme, endonuclease subunit TERM 3115 2676574 - 2676584 + g 71 -3.2 -5.16151 | GCTTCATTGACATCA TGTG TAT CACG TTTTTCTTCAATTTG CKL_2597 2677687 - 2677112 - | Type I restriction enzyme, methylase subunit TERM 3116 2677789 - 2677770 - R 76 -6.6 -4.59069 | opp_overlap 2677770, overlap 2677765 ATTACAACTATAAAA TGTAATTT TTTA AAATTACA TTTTTACTATTAAGC TERM 3117 2677770 - 2677789 + r 83 -6.6 -4.87626 | opp_overlap 2677765 2677770 ATTACAACTATAAAA TGTAATTT TTTA AAATTACA TTTTTACTATTAAGC CKL_2598 2678162 - 2677848 - | hypothetical protein CKL_2599 2678934 - 2678176 - | hypothetical protein TERM 3118 2679134 - 2679148 + H 91 -10 -4.3207 | TGTTATAATAGCCTA CGGACA ATT TGTCCG TTTCTATATTTGTAT TERM 3119 2679184 - 2679168 - H 86 -10.9 -2.79501 | opp_overlap 2679168, overlap 2679176 TATATTTGTATTATA TCGGACA ACT TGTCCGA TTGTCAAGAATAAAA TERM 3120 2679168 - 2679184 + H 90 -10.9 -3.30124 | opp_overlap 2679168 2679176 TATATTTGTATTATA TCGGACA ACT TGTCCGA TTGTCAAGAATAAAA TERM 3121 2679257 - 2679238 - g 72 -2.8 -5.33405 | overlap 2679242 GTGAGTAAAGAAAAA GAAATGGA TACT TCCACTAC AAAACTTTCTAGAGA TERM 3122 2679253 - 2679242 - g 77 -4.4 -5.12987 | overlap 2679238 GTAAAGAAAAAGAAA TGGA TACT TCCA CTACAAAACTTTCTA CKL_2600 2679223 - 2679840 + | transcriptional regulator CKL_2601 2679932 - 2680126 + | hypothetical protein CKL_2602 2680494 - 2680231 - | transposase CKL_2603 2680855 - 2680601 - | hypothetical protein CKL_2604 2681798 - 2680905 - | hypothetical protein TERM 3123 2681469 - 2681479 + g 79 -2.6 -5.88565 | ACCGCATCCTGTATC TAAA ATC TTTA TTTTTTTATTGTCCC TERM 3124 2681895 - 2681867 - H 82 -5.3 -5.48063 | overlap 2681868 ATTCAATATAAAAAA GGCTGCAAATGAA TGA TTCACCTGCAACT CCAATATCTCTATAA TERM 3125 2681894 - 2681868 - H 78 -8.8 -3.87211 | overlap 2681867 TTCAATATAAAAAAG GCTGCAAATGAA TGA TTCACCTGCAAC TCCAATATCTCTATA CKL_2605 2682180 - 2682425 + | hypothetical protein CKL_2606 2682776 - 2682441 - | hypothetical protein CKL_2607 2683478 - 2682975 - | ABC transporter permease CKL_2608 2684126 - 2683491 - | hypothetical protein CKL_2609 2684814 - 2684110 - | hypothetical protein CKL_2610 2685558 - 2684977 - | hypothetical protein TERM 3126 2685009 - 2685023 + g 72 -7.2 -3.84451 | TGTAAGTTCTCTCCG CTTTTG GCA CAAAAG TTTCACTTTCGGCAG CKL_2611 2686175 - 2685555 - | ABC transporter ATPase CKL_2612 2687309 - 2686320 - | sensory transduction histidine kinase TERM 3127 2687288 - 2687276 - G 72 -3.3 -5.18643 | overlap 2687277 TTAAGGAAAACAAAA TGGCA AAC TGCCG AAACTCTCTATTCCG CKL_2613 2687982 - 2687296 - | transcriptional regulator CKL_2614 2689059 - 2688241 - | streptomycin 3''-adenylyltransferase CKL_2615 2690349 - 2689132 - | hypothetical protein CKL_2616 2691133 - 2690393 - | methyltransferase CKL_2617 2691983 - 2691114 - | hypothetical protein TERM 3128 2691878 - 2691855 - G 74 -9 -3.09492 | opp_overlap 2691854 2691857, overlap 2691857 TTCTGAATTGTAATA GATTCCGATA TCTA TATCAGAATC CTCTGTATGGGTGCC TERM 3129 2692085 - 2692110 + r 91 -10.5 -4.23486 | opp_overlap 2692083 2692096, overlap 2692082 TTTCTATGGAAAGGG GGCCTTCAAAA TTCA TCTTGAAGGCC TTATTTTCCCTGATT CKL_2618 2693678 - 2692215 - | ABC transporter ATPase TERM 3130 2693723 - 2693742 + r 86 -9.2 -4.07568 | opp_overlap 2693735 2693736, overlap 2693724 TTTTCATTTGCTTGT ACGCAGGG AAAA CCCTGCGA TTTTAGCAGGAAAAA TERM 3131 2693724 - 2693741 + r 100 -12.7 -3.04398 | opp_overlap 2693735 2693736, overlap 2693723 TTTCATTTGCTTGTA CGCAGGG AAAA CCCTGCG ATTTTAGCAGGAAAA CKL_2619 2695018 - 2693792 - | transporter, permease component TERM 3132 2695123 - 2695087 - R 100 -12.3 -5.4833 | opp_overlap 2695099 2695100 CTAGGCAATAAAAAA TGCAGGCCTAAATCCAC AAT GTGGCTTTTGGTCTGCA TACATACAATATGGA TERM 3133 2695451 - 2695399 - R 93 -5.2 -5.79588 | gap 2, opp_overlap 2695404, overlap 2695404 TTAAAATTAAAAAAA TCCAATATTAACCGCCAA--AGGG TGCTAGC CCCTAATTGGCGGTTAATATTCTA TATCTCTTCGTCAAT TERM 3134 2695446 - 2695404 - R 84 -9.5 -3.5915 | gap 2, opp_overlap 2695404, overlap 2695399 ATTAAAAAAATCCAA TATTAACCGCCAA--AGGG TGCTAGC CCCTAATTGGCGGTTAATA TTCTATATCTCTTCG TERM 3135 2695404 - 2695446 + r 84 -9.5 -3.69083 | gap 2, opp_overlap 2695404 2695399 ATTAAAAAAATCCAA TATTAACCGCCAA--AGGG TGCTAGC CCCTAATTGGCGGTTAATA TTCTATATCTCTTCG CKL_2620 2697020 - 2695449 - | hypothetical protein CKL_2621 2697437 - 2697024 - | hypothetical protein CKL_2622 2699027 - 2697438 - | hypothetical protein CKL_2623 2699298 - 2699062 - | hypothetical protein TERM 3136 2699415 - 2699385 - R 100 -7.5 -5.69473 | overlap 2699387 CAGAGCATAAAAAAA GAGCCTGCAAGGG AAGAA CCCCCACAGGCTA CATACATTTAATAGT TERM 3137 2699413 - 2699387 - R 93 -10.1 -4.47611 | overlap 2699385 GAGCATAAAAAAAGA GCCTGCAAGGG AAGAA CCCCCACAGGC TACATACATTTAATA CKL_2624 2700196 - 2699495 - | amidase TERM 3138 2699869 - 2699841 - G 76 -5.4 -5.00846 | gap 2, overlap 2699843 TAAACAGCAGAAAAA TACGAGGCATCGGT TAG ACCG-T-CCTCGCA AATCTCAAATCCTAT TERM 3139 2700145 - 2700164 + g 95 -12.2 -3.74762 | TCGGTTTTATTGTTT TGCCTGCT TTGT AGCAGGCA TTATTCGTAAGTATT CKL_2625 2701608 - 2700214 - | hypothetical protein CKL_2626 2702045 - 2701605 - | Phage holin-related protein TERM 3140 2702110 - 2702086 - R 100 -11.5 -5.08824 | opp_overlap 2702086 TGTGTATTTAAAAAA GCACCCCTGTA AAA TACAAGAGTGC TGTTGCCGTATCACA CKL_2627 2704601 - 2702130 - | hypothetical protein CKL_2628 2705116 - 2704613 - | phage structural protein CKL_2629 2707050 - 2705134 - | hypothetical protein TERM 3141 2706545 - 2706531 - G 82 -7.8 -4.63527 | GCATTATTGTAAAAA CCCCTG TTT CAGGAG TAAAAATAGTCTTGA CKL_2630 2707904 - 2707053 - | hypothetical protein TERM 3142 2707784 - 2707765 - G 84 -6.4 -5.22289 | opp_overlap 2707764 GAGGAAATATAAAAA GCACCG TCTTGATC CGGTGC CTTAAATGTATTAAC CKL_2631 2710338 - 2707918 - | hypothetical protein TERM 3143 2710376 - 2710399 + r 75 -9.6 -2.67694 | opp_overlap 2710377, overlap 2710373 ATGCATACATGAAAA AGGAGCAATC TTCT GATTGCTCCA TAATATAATACTAGT TERM 3144 2710398 - 2710377 - R 100 -13.1 -4.84527 | opp_overlap 2710376 2710373 TGCATACATGAAAAA GGAGCAATC TTCT GATTGCTCC ATAATATAATACTAG CKL_2632 2710954 - 2710523 - | hypothetical protein TERM 3145 2711222 - 2711170 - R 75 -3.6 -5.42514 | gap 2 CCATAAATCAAAAAA CAGTCCA-ATTGGCATAAGC-CAGAA TTC CTCTGCGTCCATGCCCATCTGAACTG TTCCATAATAATAAA TERM 3146 2711270 - 2711238 - R 90 -9.3 -4.51812 | gap 1, opp_overlap 2711238 TTCCATAATAATAAA GTCGGGTAA-AGAC TTCAGC GTCCGTTACCCGAC TTCCATGTTTTTTGG CKL_2633 2711648 - 2711262 - | hypothetical protein TERM 3147 2711513 - 2711525 + g 80 -6.3 -4.84017 | CCATCTCAAAGTTTT CTGAT TTC ATCAG TTTTTCTCCAAGATT CKL_2634 2712250 - 2711660 - | hypothetical protein CKL_2635 2712595 - 2712254 - | hypothetical protein TERM 3148 2712548 - 2712532 - G 82 -6.5 -5.12707 | overlap 2712522 CCAAACCTGAAAAAA CCCCG GTTTCTA CGGGG ATAGGTATTGCTGTC CKL_2636 2713023 - 2712592 - | hypothetical protein CKL_2637 2713364 - 2713029 - | hypothetical protein CKL_2638 2713685 - 2713368 - | hypothetical protein TERM 3149 2713504 - 2713456 - G 100 -12.6 -4.16016 | gap 1, opp_overlap 2713456 2713457 2713458, overlap 2713459 CTATCGGCGAAGAAA CCA-GCCGTCGAGCCATCTCTGC TTTC GTAGAAATGACTCGACAGCATGA TTACTGCCTGTTCAG TERM 3150 2713457 - 2713503 + g 74 -9.5 -2.52987 | gap 1, opp_overlap 2713456 2713459, overlap 2713456 2713458 TATCGGCGAAGAAAC CA-GCCGTCGAGCCATCTCTGC TTTC GTAGAAATGACTCGACAGCATG ATTACTGCCTGTTCA TERM 3151 2713458 - 2713501 + g 71 -8.8 -2.79842 | opp_overlap 2713456 2713459, overlap 2713457 2713456 ATCGGCGAAGAAACC AGCCGTCGAGCCATCTCTGC TTTC GTAGAAATGACTCGACAGCA TGATTACTGCCTGTT TERM 3152 2713500 - 2713459 - G 100 -16.7 -3.10244 | opp_overlap 2713458 2713457 2713456, overlap 2713456 TCGGCGAAGAAACCA GCCGTCGAGCCATCTCTGC TTTC GTAGAAATGACTCGACAGC ATGATTACTGCCTGT CKL_2639 2714085 - 2713705 - | hypothetical protein TERM 3153 2713987 - 2714006 + g 72 -9.2 -2.69596 | overlap 2713986 2713981 2713989 2713999 AAGCGGATTGGCGGA GAGCCCCG TTAC CGAGGCTC CTTCCTTGATTTCAA CKL_2640 2715303 - 2714098 - | Phage major capsid protein TERM 3154 2715359 - 2715343 - R 75 -5.8 -4.65182 | opp_overlap 2715343 GAGAAATTAAAGAAA GCCGCT TATCC AGCGAC TCTATAGGTGTACCT CKL_2641 2716012 - 2715323 - | Phage-related protease TERM 3155 2715364 - 2715375 + g 78 -2.2 -5.84011 | TATCCAGCGACTCTA TAGG TGTA CCTG TTTTTATTTTTTGTT TERM 3156 2716032 - 2716057 + r 73 -7.5 -3.86835 | TGACCTCCTTCGGTT TTGGCAAACGC TCCT GCGTCAGCCAA TTTCGTCATATTTCC CKL_2642 2717257 - 2716013 - | Phage portal protein TERM 3157 2716982 - 2716942 - G 93 -10 -4.54727 | gap 1, opp_overlap 2716940 2716944 TGCCCCAAAGTAAAA GATGAC-TCATCAGTGTTT CTCG AAACACAAATGAAGTCATC TCTGGATTTGGTTCA CKL_2643 2718942 - 2717308 - | Phage terminase TERM 3158 2718987 - 2718937 - G 93 -10.1 -4.18018 | gap 2, opp_overlap 2718937 2718945 2718950, overlap 2718919 2718945 2718950 CCCTTTTATGGAAAA GGACATAAGAAAAGAGCCTCAATCC TAT AGAT-GAAGCTCTTTTCTC-TATCC TATTTAGATTTAGTT TERM 3159 2718945 - 2718980 + r 73 -8.5 -3.0362 | gap 1, opp_overlap 2718945 2718937 2718950, overlap 2718937 2718950 TGGAAAAGGACATAA GAAAAGAGCCTCAATC CTATA GAT-GAAGCTCTTTTC TCTATCCTATTTAGA TERM 3160 2718980 - 2718945 - R 93 -11.4 -3.68757 | gap 1, opp_overlap 2718937 2718945 2718950, overlap 2718937 2718950 TGGAAAAGGACATAA GAAAAGAGCCTCAATCC TAT AGAT-GAAGCTCTTTTC TCTATCCTATTTAGA TERM 3161 2718975 - 2718950 - R 75 -5.5 -4.86822 | gap 1, opp_overlap 2718945 2718937 2718950, overlap 2718945 2718937 AAGGACATAAGAAAA GAGCCTCAATCC TAT AGAT-GAAGCTC TTTTCTCTATCCTAT CKL_2644 2719189 - 2719001 - | hypothetical protein TERM 3162 2719202 - 2719219 + r 85 -9.9 -3.47349 | CATTGGCTACCTCCT CCGATTC TACT GAATCGG TTGTCGCTTTGCGCA CKL_2645 2719640 - 2719182 - | hypothetical protein TERM 3163 2719304 - 2719294 - G 71 -6.8 -3.96068 | overlap 2719296 GTACTGTAATAATAA CAGC TCG GCTG TCCAAGCGGCCTCCC CKL_2646 2720578 - 2719679 - | hypothetical protein CKL_2647 2720941 - 2720714 - | hypothetical protein CKL_2648 2721729 - 2720941 - | hypothetical protein CKL_2649 2723072 - 2721831 - | DNA methylase TERM 3164 2722527 - 2722541 + g 76 -6.4 -4.60949 | opp_overlap 2722527 TTTCCCATCCATCAA GACATC AAA GGTGTC TTTCTTTGTACTGTC TERM 3165 2722632 - 2722610 - G 80 -9.1 -3.71649 | opp_overlap 2722612 CCCCTAAATGCGAAA CAGCGGGCT TTTTC AGCTCGCTG TCTACATCGAAATCA TERM 3166 2722991 - 2723003 + g 70 -6.2 -4.24294 | TAAGTTTCTCATATT CCGG ATCAC CCGG TTTTAAATCCTTCCT metK2 2724246 - 2723053 - | S-adenosylmethionine synthetase CKL_2651 2724800 - 2724249 - | hypothetical protein CKL_2652 2725270 - 2724911 - | hypothetical protein TERM 3167 2725329 - 2725299 - H 100 -11.1 -4.99035 | opp_overlap 2725294 2725299 TTACCCATAGAAAAA GCCCTCGCAGGAG AAATG CTCCCGTGAAGGC TTCTGTTTATTAATA TERM 3168 2725299 - 2725329 + H 84 -8.9 -3.98448 | opp_overlap 2725299, overlap 2725294 TTACCCATAGAAAAA GCCCTCGCAGGAG AAATG CTCCCGTGAAGGC TTCTGTTTATTAATA def2 2725738 - 2726313 + | Def2 TERM 3169 2726334 - 2726370 + T 95 -11.1 -3.98113 | opp_overlap 2726341, overlap 2726341 CGCATTAGGTCGGTA TTCAAAATGAGCTGTTG TTT TGACAGCTCATTTTAAA TTTAATTACTCATTA TERM 3170 2726363 - 2726341 - T 77 -7.8 -4.18018 | opp_overlap 2726334 2726341 GGTCGGTATTCAAAA TGAGCTGT TGTTTTG ACAGCTCA TTTTAAATTTAATTA TERM 3171 2726341 - 2726363 + T 86 -9.2 -4.39318 | opp_overlap 2726341, overlap 2726334 GGTCGGTATTCAAAA TGAGCTGTTG TTT TGACAGCTCA TTTTAAATTTAATTA CKL_2654 2726902 - 2726489 - | hypothetical protein TERM 3172 2726746 - 2726773 + g 71 -5.6 -4.72272 | gap 1 CATATTTTTCAAAGG GTGGGTCAGTACT CTT AGTTC-GACTCAC TTTTTCCTCAAGAAC CKL_2655 2727117 - 2726899 - | hypothetical protein CKL_2656 2728478 - 2727117 - | Phage-related DNA helicase CKL_2657 2728740 - 2728459 - | hypothetical protein CKL_2658 2731325 - 2728959 - | hypothetical protein TERM 3173 2730399 - 2730376 - G 72 -6 -4.39426 | gap 1, overlap 2730378 CACATTGCCACAAAA GACGGCATCCT ACC AGGA-GCCGTA GTCGTGGAAGCTCTA TERM 3174 2730397 - 2730378 - G 79 -8.6 -3.80133 | gap 1, overlap 2730376 CATTGCCACAAAAGA CGGCATCCT ACC AGGA-GCCG TAGTCGTGGAAGCTC CKL_2659 2731756 - 2731322 - | hypothetical protein CKL_2660 2732508 - 2731756 - | hypothetical protein TERM 3175 2732572 - 2732514 - R 95 -12.1 -3.25942 | gap 2 ATTCGTCCATACGAA TTACCTCCTGTAA-TA-TAGTCAGAGAGG AAA CCCCTCTACCTAATAGCCACAGGAGGTAA TGAATGTTGAGGATT CKL_2661 2734536 - 2732602 - | Phage-related DNA polymerase TERM 3176 2734593 - 2734561 - R 90 -10.6 -3.75153 | opp_overlap 2734557 2734555 CCTTTCCAATGCAAA CGAGGTGACAGAAG AACAA CTTCCACCACCCCG TTTGTATTCATACTT CKL_2662 2735163 - 2734615 - | hypothetical protein TERM 3177 2734925 - 2734942 + g 74 -6.9 -4.30001 | TCACCATCTCGAAGC GGCAGCT TGAT AGCAGCC TTATTTGGTTTTTTA CKL_2663 2736304 - 2735168 - | hypothetical protein TERM 3178 2735376 - 2735398 + g 74 -7.6 -3.87737 | TCTTTATAGCCGTTT GCCTTGGCTG CTT CAGCCACAGC TTCTTCGTCTTTATA TERM 3179 2736276 - 2736323 + g 73 -7.9 -3.60502 | gap 1 CACCTATGGGACCCT GATGCGGAAAGTACTGCGTGAT CACTC ATTACCTAGTACCT-CCGCATC TTTCAACATATCTGT CKL_2664 2736620 - 2736297 - | hypothetical protein CKL_2665 2736813 - 2736595 - | hypothetical protein CKL_2666 2737525 - 2736860 - | hypothetical protein TERM 3180 2737154 - 2737169 + g 76 -5.4 -5.05782 | ATCCTCAGATTCATC GTCCTT GCGG AAGGGC TTTTTTGGCATCCCT TERM 3181 2737470 - 2737441 - G 73 -4.3 -5.06585 | gap 1, opp_overlap 2737442 2737443, overlap 2737443 CAAAGGATACAAAAA TAGGTCTGTGC-CT CGA AGTACACAGACCCT TTGTCCTGAAAATGA TERM 3182 2737468 - 2737443 - G 85 -9.1 -4.13652 | gap 1, opp_overlap 2737443 2737442, overlap 2737441 AAGGATACAAAAATA GGTCTGTGC-CT CGA AGTACACAGACC CTTTGTCCTGAAAAT CKL_2667 2737770 - 2737624 - | hypothetical protein TERM 3183 2737766 - 2737801 + g 71 -7.6 -3.46824 | opp_overlap 2737766 ACAACAATAAAAAAA GCCATACACAAACCCT TAAA AGGATTCATGTATGGC TTACTTAGTTAATAA TERM 3184 2737801 - 2737766 - G 100 -14.2 -5.97979 | opp_overlap 2737766 ACAACAATAAAAAAA GCCATACACAAACCCT TAAA AGGATTCATGTATGGC TTACTTAGTTAATAA TERM 3185 2737848 - 2737818 - R 89 -11.3 -2.8082 | opp_overlap 2737824 2737843, overlap 2737824 TACTTAGTTAATAAC TAAAAAGCGGACA TCCTG TGTCCGCTTTTTC AAAAATATTATTGAA TERM 3186 2737842 - 2737824 - R 100 -10.3 -4.99435 | opp_overlap 2737824, overlap 2737818 GTTAATAACTAAAAA GCGGACA TCCTG TGTCCGC TTTTTCAAAAATATT TERM 3187 2737824 - 2737842 + r 100 -11 -4.59511 | opp_overlap 2737818 2737824 GTTAATAACTAAAAA GCGGACAT CCT GTGTCCGC TTTTTCAAAAATATT CKL_2668 2739734 - 2737866 - | hypothetical protein CKL_2669 2739936 - 2740139 + | hypothetical protein TERM 3188 2741167 - 2741177 + G 70 -4 -5.00138 | TAATAGAGAACTTAT TGAA TTC TTCA TTTTTGGTTTACATA CKL_2670 2740196 - 2741395 + | hypothetical protein TERM 3189 2741439 - 2741403 - T 88 -8.9 -4.62957 | opp_overlap 2741401 2741399 2741403 ACAATTAAAGCAAAA GACTAATACTAGCAAAC TAT ACTTGCTGATATTAGTC TCTATATTAGTTATA CKL_2671 2742700 - 2741450 - | DNA methylase TERM 3190 2741580 - 2741596 + g 70 -7.3 -3.62096 | TGCCTATACATTTGT GTTCTTG ACA CAGGAAC TTTAAAATCATCAGG CKL_2672 2744469 - 2743108 - | RNA methyltransferase CKL_2673 2745228 - 2744500 - | hypothetical protein CKL_2674 2745483 - 2746616 + | phosphatase-related protein CKL_2675 2747390 - 2746665 - | hypothetical protein CKL_2676 2747920 - 2747591 - | hypothetical protein CKL_2677 2748056 - 2748736 + | phosphatase-related protein CKL_2678 2748755 - 2749492 + | deoxyribonuclease-related protein TERM 3191 2749540 - 2749505 - T 75 -9.3 -2.74157 | opp_overlap 2749505 2749509 2749539, overlap 2749504 2749509 TAATTATTATATAAT TAAATGAGCAAATTT TATTAT AATTTTGCTCATTTA TATATAGTATGTATT TERM 3192 2749505 - 2749540 + T 78 -9.3 -3.00661 | opp_overlap 2749504 2749505 2749509, overlap 2749509 2749539 TAATTATTATATAAT TAAATGAGCAAATTT TATTAT AATTTTGCTCATTTA TATATAGTATGTATT CKL_2679 2749914 - 2749570 - | hypothetical protein TERM 3193 2750105 - 2750080 - g 72 -3.3 -5.27476 | gap 1, overlap 2750084 TTGAACAAAATAAAA GGAAGCACCTAT TAC ATAGATGCA-CC AACCAACTGTGGAAT TERM 3194 2750102 - 2750084 - g 77 -8.2 -3.94607 | overlap 2750080 ACAAAATAAAAGGAA GCACCTAT TAC ATAGATGC ACCAACCAACTGTGG TERM 3195 2750845 - 2750863 + G 70 -8.2 -2.99546 | opp_overlap 2750844 2750847, overlap 2750847 GATTTTCATCAATAC CACTTGAA TTT TTCAGGTG TATGTGCCTTTATAA CKL_2680 2750059 - 2750955 + | hydrolase CKL_2681 2752004 - 2750952 - | hypothetical protein CKL_2682 2753036 - 2752020 - | hypothetical protein purD 2754462 - 2753221 - | phosphoribosylamine--glycine ligase TERM 3196 2753517 - 2753535 + g 80 -9.6 -3.51365 | opp_overlap 2753534 AATCAAATTTGTCAA GCTTTCCT TCA AGGGAAGC TTCTATAAGCTCTAC purH 2756010 - 2754511 - | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase purN 2756644 - 2756030 - | phosphoribosylglycinamide formyltransferase TERM 3197 2756478 - 2756492 + g 84 -2.2 -6.10489 | TTTCTATCCAATACG TGATAT TCA ATATTA TTTTTTTTTGCCCTT purM 2757627 - 2756632 - | phosphoribosylaminoimidazole synthetase purF 2759092 - 2757641 - | amidophosphoribosyltransferase purC 2759840 - 2759133 - | phosphoribosylaminoimidazole-succinocarboxamide synthase purE 2760322 - 2759843 - | hypothetical protein CKL_2690 2760805 - 2761392 + | hydrolase CKL_2691 2761628 - 2761819 + | hypothetical protein TERM 3198 2761863 - 2761833 - T 81 -10.6 -2.76087 | opp_overlap 2761824 2761834 2761836, overlap 2761824 2761832 2761836 AATACAGGTTGAAAT TCATACCTTATAGC CAA GCTATAAGGTATAT TTTATGGTATTAATA TERM 3199 2761834 - 2761862 + T 100 -11.9 -4.55625 | opp_overlap 2761824 2761833 2761832 2761836, overlap 2761824 2761836 ATACAGGTTGAAATT CATACCTTATAGC CAA GCTATAAGGTATA TTTTATGGTATTAAT TERM 3200 2761836 - 2761860 + T 100 -14.5 -3.87977 | opp_overlap 2761824 2761836 2761833 2761832, overlap 2761824 2761834 ACAGGTTGAAATTCA TACCTTATAGC CAA GCTATAAGGTA TATTTTATGGTATTA TERM 3201 2761860 - 2761836 - T 100 -14.5 -2.64981 | opp_overlap 2761824 2761834 2761836, overlap 2761824 2761833 2761832 ACAGGTTGAAATTCA TACCTTATAGC CAA GCTATAAGGTA TATTTTATGGTATTA CKL_2692 2762463 - 2761873 - | hypothetical protein TERM 3202 2762614 - 2762579 - R 100 -11.4 -5.37171 | gap 1, opp_overlap 2762581, overlap 2762582 AACATTAAATAAAAA CAA-CCCGTTGAAAACT ATT AGCTTTCAACGAGCTTG CCTTACATTCATTCA TERM 3203 2762610 - 2762582 - R 100 -13.3 -4.74052 | opp_overlap 2762581, overlap 2762579 ATTAAATAAAAACAA CCCGTTGAAAACT ATT AGCTTTCAACGAG CTTGCCTTACATTCA CKL_2693 2764089 - 2762683 - | permease TERM 3204 2764150 - 2764115 - R 95 -4.2 -6.20267 | overlap 2764147 CCAAAAATAAAAAAA TTTCTAACATGAATTA CGGG CAATCCAAATTAGAAA ATAATAAAAAATATT CKL_2694 2766276 - 2764588 - | methyltransferase TERM 3205 2765958 - 2765924 - G 73 -8 -3.49858 | opp_overlap 2765925 2765926 2765927, overlap 2765925 2765928 TTAAGTATATGATAA CTCAGGTTAGAATACT GCC AGTATTCTAACCCATA TATATTTTTCAATCC TERM 3206 2765957 - 2765925 - G 72 -9.3 -2.69433 | opp_overlap 2765925 2765926 2765927, overlap 2765924 2765928 TAAGTATATGATAAC TCAGGTTAGAATACT GCC AGTATTCTAACCCAT ATATATTTTTCAATC TERM 3207 2765926 - 2765956 + g 71 -8.4 -3.34527 | opp_overlap 2765925 2765924 2765928, overlap 2765925 2765927 AAGTATATGATAACT CAGGTTAGAATACT GCC AGTATTCTAACCCA TATATATTTTTCAAT TERM 3208 2765927 - 2765955 + g 87 -11.9 -2.59632 | opp_overlap 2765925 2765924 2765928, overlap 2765926 2765925 AGTATATGATAACTC AGGTTAGAATACT GCC AGTATTCTAACCC ATATATATTTTTCAA TERM 3209 2765954 - 2765928 - G 100 -15.4 -2.6252 | opp_overlap 2765927 2765926 2765925, overlap 2765925 2765924 GTATATGATAACTCA GGTTAGAATACT GCC AGTATTCTAACC CATATATATTTTTCA CKL_2695 2767701 - 2766316 - | efflux pump CKL_2696 2767940 - 2769157 + | protease TERM 3210 2769186 - 2769161 - T 73 -7.6 -3.78004 | opp_overlap 2769165, overlap 2769159 TTATCAGAATAAATA TTAGGGGCTG TTCATC CAGCCCTTAA ATTACATTAATCAAC TERM 3211 2769165 - 2769182 + T 74 -8.4 -3.21258 | opp_overlap 2769161 2769159 CAGAATAAATATTAG GGGCTG TTCATC CAGCCC TTAAATTACATTAAT CKL_2697 2769960 - 2769193 - | prolipoprotein diacylglyceryl transferase CKL_2698 2770891 - 2770058 - | undecaprenyl-diphosphatase TERM 3212 2771061 - 2771024 - R 90 -8.7 -4.81359 | opp_overlap 2771029, overlap 2771029 AATTTAAAGATAAAA TAAAACTGTTTTCTATA ACAA TAAAGAAAACAGTTTTC TATAAGTTTATATGC TERM 3213 2771056 - 2771029 - R 100 -8.6 -5.2894 | opp_overlap 2771029, overlap 2771024 AAAGATAAAATAAAA CTGTTTTCTATA ACAA TAAAGAAAACAG TTTTCTATAAGTTTA TERM 3214 2771029 - 2771056 + r 83 -8.6 -4.59081 | opp_overlap 2771029 2771024 AAAGATAAAATAAAA CTGTTTTCTATA ACAA TAAAGAAAACAG TTTTCTATAAGTTTA pck 2772655 - 2771069 - | phosphoenolpyruvate carboxykinase CKL_2700 2773157 - 2774518 + | hypothetical protein TERM 3215 2775286 - 2775252 - g 74 -7.9 -3.83864 | opp_overlap 2775261, overlap 2775255 2775261 AAAATTTTATAATAA CAAGGGAAACCAGGA GAAAA TCATAGCTTCCCCTG GTCTATTTTCATATA CKL_2701 2774546 - 2775277 + | cobyric acid synthase-related protein TERM 3216 2775287 - 2775261 - T 78 -8 -3.89182 | opp_overlap 2775261, overlap 2775255 2775252 TAATAACAAGGGAAA CCAGGAGAAAAT CAT AGCTTCCCCTGG TCTATTTTCATATAA clpB 2777951 - 2775351 - | ClpB CKL_2703 2779300 - 2778041 - | transcriptional regulator TERM 3217 2778765 - 2778713 - G 82 -9.5 -3.69506 | opp_overlap 2778719, overlap 2778715 2778717 2778718 2778726 2778730 CATCTCAAAATAACA CATAGCTTGATAATAAAGAGCCTTT ACC AAAAGCTCTTTATTATCAATTTTTA CCCCAATATCTATAG TERM 3218 2778763 - 2778715 - G 84 -9.9 -3.41798 | opp_overlap 2778719, overlap 2778713 2778717 2778718 2778726 2778730 TCTCAAAATAACACA TAGCTTGATAATAAAGAGCCTTT ACC AAAAGCTCTTTATTATCAATTTT TACCCCAATATCTAT TERM 3219 2778761 - 2778717 - G 90 -12.5 -3.26836 | opp_overlap 2778719, overlap 2778715 2778713 2778718 2778726 2778730 TCAAAATAACACATA GCTTGATAATAAAGAGCCTTT ACC AAAAGCTCTTTATTATCAATT TTTACCCCAATATCT TERM 3220 2778760 - 2778718 - G 100 -16 -2.55017 | opp_overlap 2778719, overlap 2778717 2778715 2778713 2778726 2778730 CAAAATAACACATAG CTTGATAATAAAGAGCCTTT ACC AAAAGCTCTTTATTATCAAT TTTTACCCCAATATC TERM 3221 2778719 - 2778759 + g 100 -17.3 -4.57837 | opp_overlap 2778718 2778717 2778715 2778713 2778726 2778730 AAAATAACACATAGC TTGATAATAAAGAGCCTTT ACC AAAAGCTCTTTATTATCAA TTTTTACCCCAATAT TERM 3222 2778752 - 2778726 - G 89 -11.8 -3.32819 | opp_overlap 2778719, overlap 2778718 2778717 2778715 2778713 2778730 CACATAGCTTGATAA TAAAGAGCCTTT ACC AAAAGCTCTTTA TTATCAATTTTTACC TERM 3223 2778748 - 2778730 - G 83 -8.2 -4.31433 | opp_overlap 2778719, overlap 2778726 2778718 2778717 2778715 2778713 TAGCTTGATAATAAA GAGCCTTT ACC AAAAGCTC TTTATTATCAATTTT CKL_2704 2780624 - 2779320 - | transcriptional regulator TERM 3224 2780227 - 2780217 - G 80 -5.4 -5.18726 | TGCTGACAATAAAAA TTGC TGT GCAA TAGGATACTCCCCTT TERM 3225 2780826 - 2780779 - R 88 -9.6 -4.09173 | opp_overlap 2780779 2780784 2780792, overlap 2780781 2780783 2780784 2780786 2780792 ACATAATAGCATAAA TACAGTATTAAAAGTGTATCAT TTAT ATAATACACTTTTAATATTACA TTTGAAAACATCATA TERM 3226 2780824 - 2780781 - R 86 -10 -3.62893 | opp_overlap 2780779 2780784 2780792, overlap 2780779 2780783 2780784 2780786 2780792 ATAATAGCATAAATA CAGTATTAAAAGTGTATCAT TTAT ATAATACACTTTTAATATTA CATTTGAAAACATCA TERM 3227 2780822 - 2780783 - R 88 -10.4 -3.37902 | opp_overlap 2780779 2780784 2780792, overlap 2780781 2780779 2780784 2780786 2780792 AATAGCATAAATACA GTATTAAAAGTGTATCAT TTAT ATAATACACTTTTAATAT TACATTTGAAAACAT TERM 3228 2780821 - 2780784 - R 100 -13.9 -2.61656 | opp_overlap 2780784 2780779 2780792, overlap 2780783 2780781 2780779 2780786 2780792 ATAGCATAAATACAG TATTAAAAGTGTATCAT TTAT ATAATACACTTTTAATA TTACATTTGAAAACA TERM 3229 2780784 - 2780821 + r 95 -11.7 -3.27525 | opp_overlap 2780783 2780781 2780779 2780784 2780786 2780792, overlap 2780779 2780792 ATAGCATAAATACAG TATTAAAAGTGTATCAT TTAT ATAATACACTTTTAATA TTACATTTGAAAACA TERM 3230 2780819 - 2780786 - R 93 -12.1 -2.83921 | opp_overlap 2780784 2780779 2780792, overlap 2780784 2780783 2780781 2780779 2780792 AGCATAAATACAGTA TTAAAAGTGTATCAT TTAT ATAATACACTTTTAA TATTACATTTGAAAA TERM 3231 2780813 - 2780792 - R 74 -6.7 -4.34947 | opp_overlap 2780784 2780779 2780792, overlap 2780786 2780784 2780783 2780781 2780779 AATACAGTATTAAAA GTGTATCAT TTAT ATAATACAC TTTTAATATTACATT TERM 3232 2781188 - 2781158 - R 84 -9.1 -4.06361 | overlap 2781187 GGATATATAAGTAAA GCTGCTGCTATCC ATCTA AAATAGCAACAGC CCTAATAGGTGCTCC CKL_2705 2781812 - 2781165 - | metal-dependent hydrolase TERM 3233 2781639 - 2781619 - G 100 -6.9 -5.58454 | overlap 2781625 TCTACAGGAAAAAAA TCCAAATTG GTT CCATTTGGA AACAAATGAGCTGGC CKL_2706 2782091 - 2781855 - | hypothetical protein TERM 3234 2782033 - 2782049 + g 79 -3.7 -5.5762 | opp_overlap 2782036, overlap 2782007 2782036 AAATAATTTTTTATT GAAGAAA TCA TTTCCTC TTTTTTCTCTTTACT CKL_2707 2782755 - 2782123 - | hypothetical protein TERM 3235 2782670 - 2782656 - G 84 -10 -3.55368 | AGGGAATGGAGATAA TGGGAG ATA CTCCCA GACCAGTCTTTGTAT TERM 3236 2782958 - 2782918 - R 100 -13.6 -3.09766 | opp_overlap 2782921, overlap 2782915 2782921 AAAATCAAACAAGGA TAACAGTATTCTAAGTGC TAGAG ACACTAAGAATACTGTTA ATAAGGTTCAGATAA TERM 3237 2782955 - 2782921 - R 90 -10.9 -3.65738 | opp_overlap 2782921, overlap 2782918 2782915 ATCAAACAAGGATAA CAGTATTCTAAGTGC TAGAG ACACTAAGAATACTG TTAATAAGGTTCAGA TERM 3238 2782921 - 2782955 + r 83 -10.2 -3.18681 | opp_overlap 2782921 2782918 2782915 ATCAAACAAGGATAA CAGTATTCTAAGTG CTAGAGA CACTAAGAATACTG TTAATAAGGTTCAGA CKL_2708 2783987 - 2783046 - | hypothetical protein TERM 3239 2783529 - 2783493 - G 77 -9 -3.27653 | opp_overlap 2783495 2783505, overlap 2783491 AGCCTGACTACAATA TATGTCATTCATTTCT ACTGA AGAATTAAATGACATA TCTCCAGAACTTAAA CKL_2709 2784648 - 2783992 - | hypothetical protein CKL_2710 2784982 - 2784650 - | transcriptional regulator CKL_2711 2785527 - 2785276 - | hypothetical protein CKL_2712 2785917 - 2785540 - | hypothetical protein CKL_2713 2786302 - 2785940 - | hypothetical protein TERM 3240 2786342 - 2786382 + r 77 -9.5 -2.81815 | opp_overlap 2786349 2786367 2786378, overlap 2786345 2786378 TATATCATGACACTT TGATATATTCAATATAT AGATTAA ATATATTGAATATATTA TAATTAATAATTAAA TERM 3241 2786345 - 2786379 + r 80 -9 -3.55145 | opp_overlap 2786349 2786367 2786378, overlap 2786342 2786378 ATCATGACACTTTGA TATATTCAATATAT AGATTAA ATATATTGAATATA TTATAATTAATAATT TERM 3242 2786390 - 2786429 + r 78 -9.8 -2.5742 | opp_overlap 2786386 2786378 2786390 2786393 2786399 2786414, overlap 2786378 2786389 2786399 ATATATTATAATTAA TAATTAAAATAATTAATT TAAT AATTAATTATTTTAATCA ATGTTGATGTTTAGC TERM 3243 2786429 - 2786390 - R 95 -12 -3.49182 | opp_overlap 2786378 2786390 2786389 2786399, overlap 2786386 2786378 2786393 2786399 2786414 ATATATTATAATTAA TAATTAAAATAATTAATT TAAT AATTAATTATTTTAATCA ATGTTGATGTTTAGC TERM 3244 2786426 - 2786393 - R 93 -11.5 -3.86981 | opp_overlap 2786378 2786390 2786389 2786399, overlap 2786386 2786378 2786390 2786399 2786414 TATTATAATTAATAA TTAAAATAATTAATT TAAT AATTAATTATTTTAA TCAATGTTGATGTTT TERM 3245 2786399 - 2786420 + r 72 -6.1 -4.30809 | opp_overlap 2786378 2786393 2786390 2786399 2786414, overlap 2786378 2786390 2786389 AATTAATAATTAAAA TAATTAATT TAAT AATTAATTA TTTTAATCAATGTTG TERM 3246 2786420 - 2786399 - R 74 -6.1 -4.58644 | opp_overlap 2786378 2786399 2786390 2786389, overlap 2786378 2786393 2786390 2786414 AATTAATAATTAAAA TAATTAATT TAAT AATTAATTA TTTTAATCAATGTTG TERM 3247 2786491 - 2786454 - R 77 -6.5 -4.81212 | opp_overlap 2786456, overlap 2786456 TTTAGCACAATAAAA TAGCTTTCCATGATA TTTAACTT TATCATAGAAAGCTC CGTTTAATATGTTGT TERM 3248 2786489 - 2786456 - R 84 -9.1 -4.02119 | opp_overlap 2786456, overlap 2786454 TAGCACAATAAAATA GCTTTCCATGATA TTTAACTT TATCATAGAAAGC TCCGTTTAATATGTT CKL_2714 2786830 - 2786525 - | hypothetical protein CKL_2715 2787347 - 2786823 - | hypothetical protein CKL_2716 2787786 - 2787328 - | hypothetical protein CKL_2717 2788298 - 2787783 - | sigma factor CKL_2718 2788846 - 2788667 - | hypothetical protein CKL_2719 2790807 - 2788843 - | cation transporting ATPase TERM 3249 2789484 - 2789495 + g 71 -2.2 -5.46657 | ATTGACAAAGGATAG CTGG CAAT TCAG TTTTTTGTTCAGATA TERM 3250 2790719 - 2790761 + g 100 -12.9 -3.51924 | opp_overlap 2790723 2790746 2790748 AAAACCACTCCTTTA TATACCCATAGGGGTACAT GTATA GTATACCCCCATGGGTATA TTGTGTCAATAGAAA TERM 3251 2790757 - 2790723 - G 100 -13 -2.87564 | opp_overlap 2790719, overlap 2790746 2790748 CCACTCCTTTATATA CCCATAGGGGTACA TGTATAG TATACCCCCATGGG TATATTGTGTCAATA TERM 3252 2790803 - 2790779 - G 100 -10.1 -5.0916 | opp_overlap 2790801, overlap 2790797 2790799 GTGTCAATAGAAAAA GCAACTGTTAC TTC ACAACAGTTGC CCATTAGGACATCTA CKL_2720 2791091 - 2790816 - | hypothetical protein TERM 3253 2791280 - 2791303 + H 70 -4.8 -4.68539 | gap 1 TCAAGGCTTTCACTT TTTTCTACAAG TTA CTT-TAGAAAA TTTTATGATTTTCAT ftsH3 2791469 - 2793235 + | FtsH3 TERM 3254 2793252 - 2793282 + T 70 -8.4 -2.72379 | opp_overlap 2793248 2793249 TTTAAAACACATGCT CTATATTTCAGCTT TAT ATGCTGAAATAAAG TGATTCAGAGGTTCA CKL_2722 2794447 - 2793431 - | hypothetical protein TERM 3255 2793837 - 2793816 - G 75 -9.5 -2.84732 | overlap 2793832 CCCAAATGTACTATA CCTGCATGT AAAA ACATACAGG TAAATAACCTATAGT CKL_2723 2795578 - 2794520 - | hypothetical protein TERM 3256 2795290 - 2795306 + g 78 -6.6 -4.43309 | opp_overlap 2795290 CTTCTATACCTACAA GGGATT TTCTC AATCCC TTTTCATTACAATTA TERM 3257 2795745 - 2795722 - H 72 -6.2 -4.31329 | opp_overlap 2795722 CTAAAAATGTTAAAA TTTCTATTTA CTTA CAAATAGAAA TTGGTTATTATAATT CKL_2724 2795797 - 2796120 + | hypothetical protein fur4 2796559 - 2796131 - | hypothetical protein TERM 3258 2796397 - 2796425 + g 87 -5.6 -5.69262 | gap 1, opp_overlap 2796403 2796404, overlap 2796404 ATAACTCTAAAGTTC TATAAATTGTAGA TAAA TCTACA-TTTATA TTTTTCTTTTTATAC TERM 3259 2796404 - 2796419 + g 76 -6.2 -4.66456 | opp_overlap 2796403 2796404, overlap 2796397 TAAAGTTCTATAAAT TGTAGA TAAA TCTACA TTTATATTTTTCTTT TERM 3260 2796602 - 2796588 - R 74 -5 -5.09225 | opp_overlap 2796595 ATTTCACTTAAAAAA GCATCA TTT TGATAC CAAATATAATAAGTA CKL_2726 2797131 - 2796580 - | hypothetical protein TERM 3261 2796641 - 2796659 + g 78 -6 -4.85599 | CCTATATAATCTGCA TACTTGCT TAC AGCATGTA TTTTTCTAAGATACC CKL_2727 2798086 - 2797343 - | protease CKL_2728 2799721 - 2798099 - | protease TERM 3262 2799894 - 2799911 + r 71 -2.7 -5.3798 | overlap 2799889 TTCCCAAATTCAATG GAAATTG TTAA CTATTTC TTTTTATTATTGTTG CKL_2729 2802025 - 2799905 - | hypothetical protein CKL_2730 2802511 - 2802068 - | transcriptional regulator CKL_2731 2803396 - 2802746 - | hypothetical protein pbp 2805432 - 2803414 - | Pbp TERM 3263 2804129 - 2804148 + g 85 -5 -5.54079 | AGCCCTGTAATATTT TTGGATAC TTTA GAATCCAA TTTTTTACTTTTTAA TERM 3264 2805484 - 2805500 + r 72 -3.7 -5.27923 | TCTTCATTTTCTCAA GGATTTA TTT TAATTCC TTTTTTATAAAATTA TERM 3265 2805723 - 2805710 - R 78 -4.5 -5.54907 | opp_overlap 2805710, overlap 2805711 TGGATAAAATAAAAA GGTAG CCCA CCACC TCAATTGGTAGAGCC CKL_2733 2807834 - 2805828 - | methyl-accepting chemotaxis protein TERM 3266 2808071 - 2808037 - R 95 -8.9 -4.8543 | gap 1, opp_overlap 2808040 2808045 2808065, overlap 2808039 2808040 TAACTTTCATAAAAA TATTAAAAGGCCGTAA AAAT TTACAGCCTTTT-ATA TCATAAAATTATTTC TERM 3267 2808070 - 2808039 - R 87 -9.6 -4.04397 | opp_overlap 2808040 2808045 2808065, overlap 2808037 2808040 ACTTTCATAAAAATA TTAAAAGGCCGTAA AAAT TTACAGCCTTTTAT ATCATAAAATTATTT TERM 3268 2808069 - 2808040 - R 100 -13.1 -3.01915 | opp_overlap 2808040 2808045 2808065, overlap 2808039 2808037 CTTTCATAAAAATAT TAAAAGGCCGTAA AAAT TTACAGCCTTTTA TATCATAAAATTATT TERM 3269 2808040 - 2808069 + r 86 -10.9 -2.81738 | opp_overlap 2808039 2808037 2808040, overlap 2808045 2808065 CTTTCATAAAAATAT TAAAAGGCCGTAA AAAT TTACAGCCTTTTA TATCATAAAATTATT TERM 3270 2808045 - 2808064 + r 74 -6.4 -4.57353 | opp_overlap 2808040 2808039 2808037, overlap 2808040 ATAAAAATATTAAAA GGCCGTAA AAAT TTACAGCC TTTTATATCATAAAA ltaA 2809100 - 2808072 - | LtaA TERM 3271 2808169 - 2808185 + g 72 -3.7 -5.27923 | TTCCCATTTTCTTCA GGATTTA TTT TAATTCC TTTTTTATAAAATTC TERM 3272 2809289 - 2809239 - R 100 -11 -4.84146 | gap 2, opp_overlap 2809245 2809285, overlap 2809245 ATTATACAAAACAAA TATAAA-TTAAACTTCC-AGACAG AAAAA CTGTCTTGGAAGTCTAATTTTATA AATATTGTAATTTAC TERM 3273 2809245 - 2809282 + r 90 -9.4 -4.47873 | gap 1, opp_overlap 2809239 2809245 CAAAACAAATATAAA TTAAACTTCC-AGACAG AAAAA CTGTCTTGGAAGTCTAA TTTTATAAATATTGT TERM 3274 2809282 - 2809245 - R 100 -11.6 -4.54608 | gap 1, opp_overlap 2809245, overlap 2809239 CAAAACAAATATAAA TTAAACTTCC-AGACAG AAAAA CTGTCTTGGAAGTCTAA TTTTATAAATATTGT proA 2810557 - 2809301 - | gamma-glutamyl phosphate reductase TERM 3275 2809731 - 2809701 - G 76 -9.8 -3.05844 | opp_overlap 2809695 2809694 CCTCTTATTTCAACA CCCATCTTACTTAA AGT TTCAGTTAGATGGG GTATGAGTTTTTCTG proB1 2811432 - 2810614 - | ProB1 TERM 3276 2810955 - 2810933 - G 74 -7.8 -3.90112 | opp_overlap 2810932, overlap 2810936 GTTTTTGCAATTAAA GCAGATAATG TAT CATTATCTCC AAATTTTATTTCTTC TERM 3277 2810952 - 2810936 - G 70 -8.1 -3.02166 | opp_overlap 2810932, overlap 2810933 TTTGCAATTAAAGCA GATAATG TAT CATTATC TCCAAATTTTATTTC proC2 2812332 - 2811481 - | ProC2 clcA 2814023 - 2812452 - | ClcA TERM 3278 2813651 - 2813626 - G 83 -10.5 -3.07994 | CCCAACTGTACTGAA GGTCCTTCCCT TCCA AGAGAAAGACC AAATCCAATAGCAAG TERM 3279 2814135 - 2814178 + r 100 -17.8 -3.55814 | opp_overlap 2814135, overlap 2814150 CCTAGTATAAATAAA GTTGTGAACTTCAAGGAAAG AAAC CTTTCTTTAAAGTTCACAAC TTATGTCCATTACTG TERM 3280 2814178 - 2814135 - R 100 -17.8 -4.59342 | opp_overlap 2814135 2814150 CCTAGTATAAATAAA GTTGTGAACTTCAAGGAAAG AAAC CTTTCTTTAAAGTTCACAAC TTATGTCCATTACTG livK 2815324 - 2814188 - | hypothetical protein livF 2816101 - 2815400 - | hypothetical protein TERM 3281 2815511 - 2815523 + g 80 -7.7 -4.3467 | opp_overlap 2815510 2815511 ACTGGCTATAGAAAG TGCCA TAT TGGCA TTTTGCTCTACCAAT livG 2816872 - 2816102 - | hypothetical protein livM 2817833 - 2816859 - | hypothetical protein livH 2818722 - 2817847 - | hypothetical protein TERM 3282 2818837 - 2818795 - H 100 -13.2 -3.22499 | opp_overlap 2818796 2818806 2818811, overlap 2818792 2818799 TCTATAAATAAACGA TTAATTATGAACTAATTATA TAT TATATTTAGTTCATAATCAA GAATACTACTAAACA TERM 3283 2818833 - 2818799 - H 95 -11.8 -3.39261 | opp_overlap 2818796 2818806 2818811, overlap 2818795 2818792 TAAATAAACGATTAA TTATGAACTAATTATA TAT TATATTTAGTTCATAA TCAAGAATACTACTA CKL_2744 2819073 - 2819777 + | molybdopterin binding protein def3 2820378 - 2819926 - | Def3 CKL_2746 2820615 - 2820379 - | transcriptional regulator TERM 3284 2820975 - 2820985 + r 74 -8.2 -3.55219 | AAATTTATTTAATCT GCCG TAT CGGC TTCTATACTAAAATT CKL_2747 2822140 - 2820968 - | hypothetical protein CKL_2748 2822693 - 2822433 - | hypothetical protein CKL_2749 2823875 - 2824204 + | hypothetical protein CKL_2750 2824405 - 2825130 + | hypothetical protein TERM 3285 2825768 - 2825728 - T 77 -7.8 -4.12901 | opp_overlap 2825730, overlap 2825730 TAAAATGTATATAAA GAGTGGTGTAATGCTA GTGATTTGA TAACATTACACCACTT TTACCTTATTATGAG TERM 3286 2825766 - 2825730 - T 88 -10.4 -3.64364 | opp_overlap 2825730, overlap 2825728 AAATGTATATAAAGA GTGGTGTAATGCTA GTGATTTGA TAACATTACACCAC TTTTACCTTATTATG TERM 3287 2825730 - 2825766 + T 81 -8.2 -4.37734 | opp_overlap 2825730 2825728 AAATGTATATAAAGA GTGGTGTAATGCTA GTGATTTGA TAACATTACACCAC TTTTACCTTATTATG CKL_2751 2826078 - 2825794 - | hypothetical protein CKL_2752 2827097 - 2826093 - | hypothetical protein TERM 3288 2826422 - 2826411 - G 70 -4.4 -4.93288 | opp_overlap 2826415 AAGACTTAAAGAAAA TCTG CCTT CAGA AGGTTCGTGTAAATA CKL_2753 2827618 - 2827124 - | hypothetical protein TERM 3289 2827389 - 2827399 + g 95 -5.4 -6.02919 | TTAGTAGCTTCTACA TCTG CAT CAGA TTTTTTTATTTCTAC TERM 3290 2827880 - 2827862 - R 79 -4.7 -5.42514 | TTAGAAAGCAAAAAA TAAGTTT CTAAT AAACTTA CATAAATAGATTTGC CKL_2754 2830460 - 2827878 - | hypothetical protein TERM 3291 2830436 - 2830420 - G 71 -8.1 -3.19563 | overlap 2830414 2830418 GATATATTATCAACA TTTGACT GAA AGTCAAA AAGCTTTACTCTATC CKL_2755 2831219 - 2830479 - | hypothetical protein TERM 3292 2830872 - 2830886 + g 79 -10 -2.82766 | overlap 2830871 2830881 ATATACCATCCATTT TGGCTC TTG GAGCCA CTGTTCTTTTACTAC CKL_2756 2832151 - 2831222 - | hypothetical protein CKL_2757 2833921 - 2832152 - | hypothetical protein CKL_2758 2834648 - 2833938 - | hypothetical protein CKL_2759 2835180 - 2835386 + | hypothetical protein TERM 3293 2836662 - 2836649 - T 71 -3.9 -5.1286 | opp_overlap 2836649 TAAAAATTATAAAAA TTGAA TACG TTCAA TTTAAATACAATTCT CKL_2760 2836884 - 2836687 - | hypothetical protein CKL_2761 2838071 - 2836890 - | DNA helicase-related protein CKL_2762 2839154 - 2838252 - | transporter protein TERM 3294 2838715 - 2838727 + g 72 -3.4 -5.29445 | ATCCACGGAATTTTA CCAT ACTGA ATGG TTTTTATTATTACAC TERM 3295 2839362 - 2839324 - R 75 -8.4 -3.41795 | gap 1, opp_overlap 2839328 2839333 2839336, overlap 2839326 2839333 AAACTTTTATCACAA TA-GAGAAAAGCACCTG TAAAAT CAGGTACTCTTCTCATA TCACTAAAATTTACA TERM 3296 2839359 - 2839326 - R 100 -12.6 -3.27653 | opp_overlap 2839328 2839333 2839336, overlap 2839324 2839333 ACTTTTATCACAATA GAGAAAAGCACCTG TAAAAT CAGGTACTCTTCTC ATATCACTAAAATTT TERM 3297 2839352 - 2839333 - R 75 -5.7 -4.71223 | opp_overlap 2839328 2839333 2839336, overlap 2839326 2839324 TCACAATAGAGAAAA GCACCTG TAAAAT CAGGTAC TCTTCTCATATCACT CKL_2763 2840200 - 2839373 - | transcriptional regulator gerKA3 2840413 - 2841894 + | GerKA3 TERM 3298 2842257 - 2842270 + G 79 -2.5 -5.81412 | opp_overlap 2842257 TAAGCACCTCAAAAA TATTA CTGA TAATA TTTTTTTTAGCTGCA TERM 3299 2842757 - 2842773 + G 76 -3.7 -5.40474 | opp_overlap 2842757 2842758, overlap 2842758 CACTATTTTATAACA GCTTTCA TCT TGAAAGA TTTTTTTAAAAAAAT TERM 3300 2842758 - 2842772 + G 72 -7.2 -3.83561 | opp_overlap 2842758 2842757, overlap 2842757 ACTATTTTATAACAG CTTTCA TCT TGAAAG ATTTTTTTAAAAAAA gerKB3 2841887 - 2842981 + | GerKB3 TERM 3301 2843202 - 2843180 - g 75 -4.9 -5.04377 | TGAAAATAAAATAAA CAGTACC TTGAAAACC GGTACTG CAAAAACCAAAGGAG TERM 3302 2843634 - 2843620 - g 74 -5.8 -4.68103 | opp_overlap 2843619 TTAATGGTAATAAAA TGATTT CAA AAATCA ATGTTGGCGAATTAA gerKC4 2842968 - 2844089 + | GerKC4 TERM 3303 2844142 - 2844104 - T 78 -7.7 -4.31835 | opp_overlap 2844100 2844097 AATTTTTATAATAAA GTATCTGAAATTATATA TAACT TATATGTTTTCAGATAC TAAAATATTTTAACT CKL_2767 2844419 - 2844156 - | hypothetical protein TERM 3304 2844583 - 2844602 + H 71 -8 -3.2818 | opp_overlap 2844586, overlap 2844530 2844586 AACTCCACCTGAACC TAAGAATC ACTT GATTCTTA TATTATAACTCTTAA CKL_2768 2844718 - 2845116 + | hypothetical protein mdh 2845310 - 2846419 + | hypothetical protein TERM 3305 2846654 - 2846640 - g 82 -2.8 -5.97575 | overlap 2846642 AACTTATAAAAAAAA TAGGTA GTT TACCTG TGGGAAAAGCAGTTA TERM 3306 2846652 - 2846642 - g 71 -5.4 -4.62054 | overlap 2846640 CTTATAAAAAAAATA GGTA GTT TACC TGTGGGAAAAGCAGT CKL_2770 2846459 - 2846995 + | hypothetical protein TERM 3307 2847077 - 2847042 - f 100 -12.2 -5.24449 | opp_overlap 2847045 2847051 TATAAATCTAAAAAA TAATTAAAATATTCCC AATG GGGGATATTTTAATTA TTACGCACATTCAGG TERM 3308 2847045 - 2847074 + F 95 -11.7 -3.62522 | opp_overlap 2847042, overlap 2847051 AAATCTAAAAAATAA TTAAAATATTCCC AATG GGGGATATTTTAA TTATTACGCACATTC TERM 3309 2847051 - 2847068 + F 74 -6.3 -4.56133 | opp_overlap 2847042, overlap 2847045 AAAAAATAATTAAAA TATTCCC AATG GGGGATA TTTTAATTATTACGC sod 2847141 - 2847797 + | superoxide dismutase TERM 3310 2847832 - 2847798 - T 86 -10.3 -3.18913 | opp_overlap 2847798 2847801 2847808, overlap 2847801 2847808 AATAGACATATTTAA TAATAAAAAACAGCT TTAAG AGCTGTTTTTCACTA TTTCCCTGCAAATAA TERM 3311 2847829 - 2847801 - T 89 -9.8 -3.72632 | opp_overlap 2847801 2847798 2847808, overlap 2847798 2847808 AGACATATTTAATAA TAAAAAACAGCT TTAAG AGCTGTTTTTCA CTATTTCCCTGCAAA TERM 3312 2847808 - 2847822 + T 77 -6.4 -4.77986 | opp_overlap 2847801 2847798 2847808, overlap 2847801 2847798 TTTAATAATAAAAAA CAGCTT TAA GAGCTG TTTTTCACTATTTCC TERM 3313 2847822 - 2847808 - T 90 -5.7 -5.64873 | opp_overlap 2847808 2847801 2847798, overlap 2847801 2847798 TTTAATAATAAAAAA CAGCT TTAAG AGCTG TTTTTCACTATTTCC CKL_2772 2849200 - 2848424 - | ABC transporter permease CKL_2773 2850102 - 2849200 - | ABC transporter permease TERM 3314 2850176 - 2850130 - R 95 -11.3 -4.0257 | gap 1, opp_overlap 2850137 2850143, overlap 2850137 CCCAAAAATCAATAA CTATTAATCTAAAGTTCTAGCT GTAT AACTAGAACTTTAGATTTA-AG AATAAATTATTTAAT TERM 3315 2850170 - 2850137 - R 100 -14.9 -3.33573 | opp_overlap 2850137 2850143, overlap 2850130 ATCAATAACTATTAA TCTAAAGTTCTAGCT GTAT AACTAGAACTTTAGA TTTAAGAATAAATTA TERM 3316 2850137 - 2850170 + r 100 -12.7 -3.58269 | opp_overlap 2850137 2850130, overlap 2850143 ATCAATAACTATTAA TCTAAAGTTCTAGCT GTAT AACTAGAACTTTAGA TTTAAGAATAAATTA CKL_2774 2851238 - 2850183 - | ABC transporter substrate-binding protein CKL_2775 2852355 - 2851267 - | ABC transporter ATPase TERM 3317 2852490 - 2852508 + H 70 -3.2 -5.2204 | opp_overlap 2852490 CATAATATAATAATA TATATATG CAT CTTATATA TTTTTATTAATTATA TERM 3318 2852610 - 2852651 + G 71 -8.5 -2.89955 | gap 1, overlap 2852609 2852647 TTTTAATACTGATAT CTATAAATTGAATG-TAT TGTCTTT ATATCATTCAATTTATAG CTTATATATTTATTT TERM 3319 2852723 - 2852764 + G 88 -11.5 -3.35197 | gap 1, opp_overlap 2852725 2852729 2852732, overlap 2852722 2852720 2852729 2852732 TATATTTTGTTATAT TATTAATAATAATATGTATA ATT TAT-CATATTATTATTAATA TTCATATATATAAAA TERM 3320 2852762 - 2852725 - g 74 -9.7 -2.62396 | gap 1, opp_overlap 2852722 2852720 2852723 2852729 2852732, overlap 2852729 2852732 TATTTTGTTATATTA TTAATAATAATATGTATA ATT TAT-CATATTATTATTAA TATTCATATATATAA TERM 3321 2852918 - 2852873 - g 75 -9.5 -2.83747 | opp_overlap 2852884, overlap 2852884 2852886 TAATTTTCATAAGCA TTTATAAAAAATACTATAAAA TATT TTTTATAGCATCTTATATAAA AAGGAAATATAAGTA TERM 3322 2852907 - 2852884 - g 84 -6.2 -5.28778 | opp_overlap 2852884, overlap 2852873 2852886 AGCATTTATAAAAAA TACTATAAAA TATT TTTTATAGCA TCTTATATAAAAAGG TERM 3323 2852905 - 2852886 - g 74 -6.6 -4.2748 | opp_overlap 2852884, overlap 2852884 2852873 CATTTATAAAAAATA CTATAAAA TATT TTTTATAG CATCTTATATAAAAA CKL_2776 2852557 - 2852973 + | hypothetical protein TERM 3324 2853146 - 2853173 + T 75 -7.1 -4.1413 | opp_overlap 2853143 2853148 2853150, overlap 2853148 2853170 TAAAAGACTAGATGA CATATGGCACT TAAAAT AGTGCCATATA TTTTAGAGATATATT TERM 3325 2853148 - 2853171 + T 84 -9.7 -3.66256 | opp_overlap 2853143 2853148 2853150, overlap 2853146 2853170 AAAGACTAGATGACA TATGGCACT TAAAAT AGTGCCATA TATTTTAGAGATATA TERM 3326 2853171 - 2853148 - T 77 -9.7 -2.89556 | opp_overlap 2853148 2853146 2853170, overlap 2853143 2853150 AAAGACTAGATGACA TATGGCACT TAAAAT AGTGCCATA TATTTTAGAGATATA TERM 3327 2853235 - 2853267 + T 71 -2.7 -5.52023 | ATAAAGATAACTATT TAGCTAGAGAGTACG CCA TGATTTCTCTAGTTA TTTTTTATTAATAAT deoC 2853921 - 2853265 - | hypothetical protein CKL_2778 2855198 - 2854269 - | transporter protein CKL_2779 2855836 - 2855219 - | ABC transporter permease nifD7 2856346 - 2856050 - | NifD7 nifD8 2856598 - 2856380 - | NifD8 CKL_2782 2856890 - 2856600 - | hypothetical protein TERM 3328 2857017 - 2856974 - R 100 -15 -5.60689 | opp_overlap 2856974, overlap 2856943 TTAGATAATAAAAAA CCAGAAACCTTAAATAAAAT ATAA ATTTTATTTAAAGCCTCTGG TTTCCCAGTCAACTA TERM 3329 2856974 - 2857017 + r 76 -8.4 -3.57462 | opp_overlap 2856943 2856974 TTAGATAATAAAAAA CCAGAAACCTTAAATAAAAT ATAA ATTTTATTTAAAGCCTCTGG TTTCCCAGTCAACTA TERM 3330 2857078 - 2857057 - R 86 -5.9 -5.4756 | overlap 2857059 AATGTGAATAAAAAA TCCCCTTTC AAAA GAAAAGGAA TATGTGCTAAAATAT CKL_2783 2857619 - 2857257 - | NifB-related protein nifK5 2858299 - 2857637 - | NifK5 nifk6 2858883 - 2858524 - | Nifk6 nifD9 2859266 - 2858928 - | NifD9 TERM 3331 2859564 - 2859529 - R 79 -3.5 -5.58179 | GATTATAATAAAAAA GAGATACTAAGTA AAATTTATAA TACTTAATACCTC TGGTTTTCCAGTTAG TERM 3332 2859650 - 2859621 - R 100 -10.9 -5.02715 | opp_overlap 2859621 2859645 ACAGTAAATTAAAAA GGCCAGTTTTACT TTAT AATAAAACTAGCC TCTGGTATCTCTAGT CKL_2787 2861847 - 2859871 - | methyl-accepting chemotaxis protein TERM 3333 2860637 - 2860662 + g 83 -10.5 -3.14463 | overlap 2860620 TCCTCTATGGATGCA GTCACTTCTTC TGTA GAGGAGGTGAC TTCCTGAGAACAATT TERM 3334 2862035 - 2862004 - R 95 -7.4 -5.45813 | TATCAAAAAATAAAA CCACCACTTAGC TAAATGAC ACTAAATGGTGG CTAAAATCCCAGCTC kipA 2863457 - 2862441 - | KipA TERM 3335 2863239 - 2863266 + g 75 -8 -3.65902 | gap 1, overlap 2863243 AAAATCCCCTCCTGT TATGGAAAAAAGG GTA CCTTTTTTC-ATA TTTAAATAAGGTCCA TERM 3336 2863243 - 2863263 + g 86 -11.3 -2.64322 | overlap 2863239 TCCCCTCCTGTTATG GAAAAAAGG GTA CCTTTTTTC ATATTTAAATAAGGT kipI 2864191 - 2863448 - | KipI CKL_2790 2864984 - 2864217 - | hypothetical protein TERM 3337 2865210 - 2865168 - H 78 -9.1 -3.16151 | gap 1, opp_overlap 2865168 2865171 2865179, overlap 2865166 2865179 GTAATTATTAATAGA TATGTTATAAATAAAAAATA TTAT TATTTTTTATTTATAA-ATA TGTTAAAATAGAGTA TERM 3338 2865168 - 2865210 + H 76 -9.1 -3.06162 | gap 1, opp_overlap 2865168 2865166 2865179, overlap 2865171 2865179 GTAATTATTAATAGA TATGTTATAAATAAAAAATA TTAT TATTTTTTATTTATAA-ATA TGTTAAAATAGAGTA TERM 3339 2865171 - 2865208 + H 76 -8.9 -3.08813 | opp_overlap 2865168 2865166 2865179, overlap 2865168 2865179 ATTATTAATAGATAT GTTATAAATAAAAAATA TTAT TATTTTTTATTTATAAA TATGTTAAAATAGAG map2 2865259 - 2866014 + | Map2 TERM 3340 2866066 - 2866023 - f 86 -10 -3.63715 | opp_overlap 2866028, overlap 2866025 2866028 2866059 TATATAAGTATATAA CATAACTAATTTCAAATAAT TATT ATTGTTTGAAATTAGTTATT AAAAAACTATAAAAA TERM 3341 2866064 - 2866025 - f 100 -12.6 -3.38671 | opp_overlap 2866028, overlap 2866023 2866028 2866059 TATAAGTATATAACA TAACTAATTTCAAATAAT TATT ATTGTTTGAAATTAGTTA TTAAAAAACTATAAA TERM 3342 2866028 - 2866061 + F 95 -12.1 -3.62224 | opp_overlap 2866025 2866023 2866028 2866059 AAGTATATAACATAA CTAATTTCAAATAAT TATT ATTGTTTGAAATTAG TTATTAAAAAACTAT TERM 3343 2866061 - 2866028 - f 89 -9.9 -3.81548 | opp_overlap 2866028, overlap 2866025 2866023 2866059 AAGTATATAACATAA CTAATTTCAAATAAT TATT ATTGTTTGAAATTAG TTATTAAAAAACTAT TERM 3344 2866291 - 2866307 + G 70 -8.1 -3.052 | ATAAACTAAGTTACG GCTTATA TGT TATAAGC TCTATCTCTGAAGGT hrb 2866254 - 2866943 + | Hrb TERM 3345 2866959 - 2867016 + F 95 -11.9 -3.83486 | opp_overlap 2866966 2866981, overlap 2866972 2866981 ATAACCTAATCTGAT TTTAAAATTTAAATTATAGAAATTTCT TTTA AGAAATTTCTATAATTTAAATTGACAA TTATTAAATTTTATA TERM 3346 2867009 - 2866966 - f 100 -18.8 -4.14511 | opp_overlap 2866959 2866972 2866981, overlap 2866981 AATCTGATTTTAAAA TTTAAATTATAGAAATTTCT TTTA AGAAATTTCTATAATTTAAA TTGACAATTATTAAA TERM 3347 2866972 - 2867003 + F 100 -13.4 -3.75897 | opp_overlap 2866966 2866981, overlap 2866959 2866981 ATTTTAAAATTTAAA TTATAGAAATTTCT TTTA AGAAATTTCTATAA TTTAAATTGACAATT TERM 3348 2867152 - 2867210 + F 100 -14.4 -5.21236 | opp_overlap 2867155, overlap 2867129 AGCCCTATGGGGTAA TAAGACTTTTAACATAGTTCATAAGT TTATTTT AATTATGAACTACGTTAAAGGTCTTA TTTTTATTATAAATT TERM 3349 2867207 - 2867155 - f 95 -11.7 -3.62597 | opp_overlap 2867129 2867152 CCTATGGGGTAATAA GACTTTTAACATAGTTCATAAGT TTATTTT AATTATGAACTACGTTAAAGGTC TTATTTTTATTATAA TERM 3350 2867748 - 2867726 - g 100 -11.4 -4.7254 | opp_overlap 2867725 2867724 2867728 ATTCTTCACTAAAAA GAATGGCATA CTG TATGCCACTC CATTATTTGCTATAT CKL_2793 2867268 - 2868128 + | hypothetical protein TERM 3351 2868179 - 2868163 - T 100 -10.9 -4.96996 | opp_overlap 2868158 CTTAAATAAAATAAA GGAGACT TAA AGTCTCC TCAACTAAGTTTTAA CKL_2794 2868727 - 2868200 - | hypothetical protein hbd2 2869690 - 2868731 - | Hbd2 TERM 3352 2869830 - 2869792 - R 82 -6.3 -5.03994 | overlap 2869824 CTGCATATATAAAAA TATAATGTTCGGCAA TAAACACCT TTACCAAACATTATA TTTAATGCTTCCATG CKL_2796 2871451 - 2869862 - | ABC transporter permease TERM 3353 2871250 - 2871231 - G 79 -5 -5.27477 | opp_overlap 2871229 ACCGGAATTAAAAAA CCCAGT AAAGCCAG ACTGGG TATAGATTGTATAAC CKL_2797 2872578 - 2871451 - | ABC transporter ATPase TERM 3354 2872960 - 2872928 - R 100 -10.1 -5.16132 | opp_overlap 2872926 2872931 TAGATGAAAATAAAA GAACATAGACTTTTT TAA ATAAAATCTATGTTC TCTAAATTATATATT CKL_2798 2873600 - 2872980 - | transcriptional regulator dapB1 2873948 - 2874763 + | DapB1 TERM 3355 2874914 - 2874864 - T 100 -14.5 -5.31275 | gap 1, opp_overlap 2874871, overlap 2874871 TTTCACCATAAAAAA TC-AAAAATTTAGAGGCTTATCAT AATT ATGATAAGCCTCTAAATTTGCAGA AAATTCTTGATTATA TERM 3356 2874871 - 2874906 + T 100 -19.4 -3.54638 | opp_overlap 2874864 2874871 ATAAAAAATCAAAAA TTTAGAGGCTTATCAT AATT ATGATAAGCCTCTAAA TTTGCAGAAAATTCT TERM 3357 2874906 - 2874871 - T 100 -19.4 -5.27769 | opp_overlap 2874871, overlap 2874864 ATAAAAAATCAAAAA TTTAGAGGCTTATCAT AATT ATGATAAGCCTCTAAA TTTGCAGAAAATTCT CKL_2800 2875288 - 2874959 - | hypothetical protein CKL_2801 2876148 - 2875327 - | hypothetical protein CKL_2802 2878541 - 2876184 - | hypothetical protein TERM 3358 2877094 - 2877110 + g 77 -8 -3.767 | AGTGCGCCAGGAATC CCAGCA TCTAT TGCTGG TTTCATAAATAACTC TERM 3359 2877365 - 2877388 + g 80 -9.6 -3.45031 | overlap 2877357 CCTTATCTGCAACTT TTGCTGCATC ATCT GCTGCAGCAA TTCCATTTTTCACAG TERM 3360 2877403 - 2877428 + g 74 -8.9 -3.16683 | opp_overlap 2877406 ATTCCATTTTTCACA GCACCTGCTGC TCCC GCAGCTGCTGC TTCATCGCCTACCAT TERM 3361 2878144 - 2878166 + g 82 -7.8 -4.61284 | AGTTCTAAAATATCT GGTTTATTTC CTG GAAATACACC TTTTACTTTAATATT CKL_2803 2879753 - 2878602 - | hypothetical protein CKL_2804 2880660 - 2879923 - | transcriptional regulator CKL_2805 2881705 - 2880755 - | hypothetical protein TERM 3362 2881670 - 2881680 + g 72 -2.6 -5.4593 | TATATCCCCCTGCTT TAAA TCC TTTA TTTTTATTGTTTTAA CKL_2806 2883571 - 2881706 - | sensor protein TERM 3363 2883553 - 2883537 - G 70 -8.1 -3.11281 | opp_overlap 2883535 2883533, overlap 2883533 2883532 GCAGTTAAAATTATA GCTAAAA TTA TTTTAGC AATATCCTTATTATG CKL_2807 2884166 - 2883774 - | hypothetical protein TERM 3364 2884306 - 2884282 - H 100 -15.9 -3.53933 | opp_overlap 2884277 ATATTAATATCATAA GCTGAATCGAT AAA ATCGATTCAGC TGTAAATATGATCAA TERM 3365 2884994 - 2884984 - g 74 -4 -5.12971 | AAGAGGTAAGAAAAA GAAA ATA TTTC ACTGCTTTAAGGGAT TERM 3366 2885571 - 2885561 - g 74 -4 -5.24799 | opp_overlap 2885561 TTACAAATACAAAAA TAGT ATA ACTA TATATTTAAAAATGT TERM 3367 2885899 - 2885909 + G 73 -8.2 -3.53298 | ACGATAATCCAGATT GGGC TAT GCCC TTAATTTCAGATAAT CKL_2808 2884743 - 2886551 + | DNA repair protein TERM 3368 2886555 - 2886579 + T 71 -4.4 -4.8543 | opp_overlap 2886555 GAACAACAATAAAAA GACTTATC AATTTTTAA GATAAGTC TTTTTATACAAATTA TERM 3369 2886579 - 2886555 - T 78 -4.4 -5.3798 | opp_overlap 2886555 GAACAACAATAAAAA GACTTATC AATTTTTAA GATAAGTC TTTTTATACAAATTA CKL_2809 2886987 - 2886592 - | hypothetical protein CKL_2810 2887640 - 2887008 - | ribonuclease H-related protein TERM 3370 2887518 - 2887532 + g 79 -7.2 -4.3953 | AAATATTTCAGCTTC TTTACG ACT CGTAAA TTTCTTATACTTAGC trmB 2888373 - 2887738 - | tRNA (guanine-N(7))-methyltransferase TERM 3371 2888701 - 2888691 - g 70 -4 -5.04325 | opp_overlap 2888682, overlap 2888682 GGCAAACTATAAAAA TAGA TAT TCTA AAAAGTACATTTTCT TERM 3372 2889009 - 2888999 - g 74 -4 -5.18715 | ATAAAAATAACAAAA GATT ACA AATC AAATAAAAAACCTTT CKL_2812 2888492 - 2889646 + | hypothetical protein TERM 3373 2889650 - 2889682 + T 90 -10.9 -3.2496 | opp_overlap 2889650 2889655, overlap 2889655 TCTAATAACTAAAAA TAAAACTTCCAAT TCAACTT ATTGGAAGTTTTA TTCAGTTGTCAATTA TERM 3374 2889682 - 2889650 - T 100 -10.9 -4.99435 | opp_overlap 2889650 2889655, overlap 2889655 TCTAATAACTAAAAA TAAAACTTCCAAT TCAACTT ATTGGAAGTTTTA TTCAGTTGTCAATTA TERM 3375 2889655 - 2889677 + T 77 -6.4 -4.73635 | opp_overlap 2889650 2889655, overlap 2889650 TAACTAAAAATAAAA CTTCCAAT TCAACTT ATTGGAAG TTTTATTCAGTTGTC TERM 3376 2889677 - 2889655 - T 86 -6.4 -5.34655 | opp_overlap 2889655 2889650, overlap 2889650 TAACTAAAAATAAAA CTTCCAAT TCAACTT ATTGGAAG TTTTATTCAGTTGTC CKL_2813 2890336 - 2889695 - | protease CKL_2814 2891388 - 2890360 - | hypothetical protein CKL_2815 2892432 - 2891425 - | hypothetical protein CKL_2816 2894022 - 2892646 - | PhoH-related protein TERM 3377 2894167 - 2894144 - R 100 -12.6 -4.64048 | opp_overlap 2894146 CATGATATAAAGAAA GAGCATAGAA TAAC TTCTATGCTC TTGAAAAAACTTCTG TERM 3378 2894146 - 2894165 + r 78 -9.4 -3.02461 | opp_overlap 2894144 TGATATAAAGAAAGA GCATAGAA TAAC TTCTATGC TCTTGAAAAAACTTC CKL_2817 2894393 - 2894160 - | hypothetical protein TERM 3379 2894419 - 2894429 + H 71 -2.6 -5.48054 | ACCCCCTTTGTTTAC TTTA TTG TAAA TTTTTTCCTTTTAAT CKL_2818 2894557 - 2895282 + | ABC transporter ATPase TERM 3380 2895524 - 2895538 + G 72 -2.8 -5.35459 | overlap 2895526 TCAAGTGCTGTTATA TTTACC TTT GGTATA TTTTTTATAATGTCT TERM 3381 2896807 - 2896825 + G 71 -6.8 -4.09685 | GATTTTAGGTTCACT TATCACTG GAA TAGTGATA TTTTCCACCATACAA CKL_2819 2895275 - 2896960 + | transporter protein TERM 3382 2896988 - 2897035 + T 100 -9.6 -4.80396 | gap 1, opp_overlap 2896992 2896995 2896998, overlap 2896992 TAAAATATACTCGAA TAAATAACAAGTTAA-CATGCTT ACA AAGCATCATTAACTTGCTATTTA TTTTTCCATATTTTA TERM 3383 2897031 - 2896992 - T 91 -10.4 -4.2008 | gap 1, opp_overlap 2896988 2896992, overlap 2896995 2896998 ATATACTCGAATAAA TAACAAGTTAAC-ATGCTT ACA AAGCATCATTAACTTGCTA TTTATTTTTCCATAT TERM 3384 2896992 - 2897031 + T 78 -6 -4.89966 | gap 1, opp_overlap 2896992 2896995 2896998, overlap 2896988 ATATACTCGAATAAA TAACAAGTTAA-CATGCTT ACA AAGCATCATTAACTTGCTA TTTATTTTTCCATAT TERM 3385 2897028 - 2896995 - T 91 -9.9 -4.21438 | gap 1, opp_overlap 2896992 2896988, overlap 2896992 2896998 TACTCGAATAAATAA CAAGTTAAC-ATGCTT ACA AAGCATCATTAACTTG CTATTTATTTTTCCA CKL_2820 2897719 - 2897048 - | hypothetical protein TERM 3386 2897128 - 2897142 + g 71 -8.6 -2.88231 | overlap 2897129 TGCCTCTTTGACCTC CTGATG CTG CATCAG TATAATAATTATACT TERM 3387 2897142 - 2897156 + g 83 -5.8 -5.20216 | overlap 2897129 CCTGATGCTGCATCA GTATAA TAA TTATAC TTTTTTCCTACTGTA TERM 3388 2897836 - 2897809 - R 100 -13.6 -4.98857 | opp_overlap 2897814, overlap 2897800 ATTTAATTATAAAAA TATAAGCACCGG GATA CCAGTGCTTATA AGGCAATAATGCGTT CKL_2821 2898663 - 2897974 - | hypothetical protein TERM 3389 2898784 - 2898752 - R 88 -9.3 -4.39426 | overlap 2898757 TACATTTTTACAAAA TAAAAGAGACAAGCC TAG AGCTTACCTCTTTCA AGTAACACCATATCA TERM 3390 2898779 - 2898757 - R 86 -7 -5.18371 | overlap 2898752 TTTTACAAAATAAAA GAGACAAGCC TAG AGCTTACCTC TTTCAAGTAACACCA CKL_2822 2900509 - 2898797 - | methyl-accepting chemotaxis protein CKL_2823 2901790 - 2900669 - | signal transduction protein TERM 3391 2901652 - 2901669 + g 72 -2.8 -5.44721 | GTTCTTGAAAACATC TATGTA TTTTAT TACATA TTTTTTTCACATCCT CKL_2824 2902370 - 2901846 - | signal transduction protein TERM 3392 2902823 - 2902844 + r 72 -5.8 -4.53705 | opp_overlap 2902819 2902824, overlap 2902824 CATAATAAAAACGAA AGCTCTGG AATCAA CCAGAGCC TTTTATCTAAAAGTT TERM 3393 2902824 - 2902843 + r 79 -9.3 -3.315 | opp_overlap 2902819 2902824, overlap 2902823 ATAATAAAAACGAAA GCTCTGG AATCAA CCAGAGC CTTTTATCTAAAAGT TERM 3394 2902843 - 2902824 - R 88 -9.3 -4.44392 | opp_overlap 2902824 2902823, overlap 2902819 ATAATAAAAACGAAA GCTCTGG AATCAA CCAGAGC CTTTTATCTAAAAGT CKL_2825 2903421 - 2903086 - | hypothetical protein CKL_2826 2904130 - 2903411 - | hypothetical protein TERM 3395 2904156 - 2904210 + H 71 -2.8 -5.45726 | gap 1, opp_overlap 2904191 2904194 2904195 2904197 CCTTTTATCGTCATT TATTATGTTATAATATAATAAAATA TGCTAT TATATAATTATATTATAA-ATAATA TTTTTTTACAATATA TERM 3396 2904317 - 2904307 - g 86 -3.2 -6.19302 | ATATAAGAAAAAAAA GGCA GCT TACC CTAGAAATGCTTTCT CKL_2827 2904252 - 2904806 + | transcriptional regulator CKL_2828 2904959 - 2905183 + | hypothetical protein TERM 3397 2905255 - 2905294 + T 74 -8.9 -2.90496 | gap 1, opp_overlap 2905258 2905260, overlap 2905259 2905260 CCATCTGAACCTTAT TAACAGTATTCTTAGTGT CTTTA ACACTCAGAATAC-GTTA TCCTTTAGGGGAAGA TERM 3398 2905260 - 2905290 + T 78 -9.9 -2.75769 | opp_overlap 2905258 2905260, overlap 2905259 2905255 TGAACCTTATTAACA GTATTCTTAGTGT CTTTA ACACTCAGAATAC GTTATCCTTTAGGGG TERM 3399 2905290 - 2905260 - T 86 -10.6 -3.15574 | opp_overlap 2905260 2905259 2905255, overlap 2905258 TGAACCTTATTAACA GTATTCTTAGTGTC TTT AACACTCAGAATAC GTTATCCTTTAGGGG TERM 3400 2905413 - 2905391 - T 78 -7.8 -4.37092 | opp_overlap 2905391 AGCGTTCGGATAAAA TAGGAGAG TAATTGT CTCTCCTA TTGTTTAGCTGCTGG TERM 3401 2905391 - 2905413 + T 75 -7.8 -3.97674 | opp_overlap 2905391 AGCGTTCGGATAAAA TAGGAGAG TAATTGT CTCTCCTA TTGTTTAGCTGCTGG CKL_2829 2905887 - 2905438 - | flavodoxin TERM 3402 2905664 - 2905676 + g 72 -4.9 -4.78149 | AATACAAATGCTTTT TTATG AGA CATAA TTTTTAAGTTATCAA CKL_2830 2906062 - 2906571 + | hypothetical protein TERM 3403 2906827 - 2906799 - T 84 -4 -5.75478 | gap 1, opp_overlap 2906802, overlap 2906802 AATTACATAAAAAAA TAAGGCAC-TATA AAAT TATAAGTGCCTTT TCTCCTTATTAAACA TERM 3404 2906824 - 2906802 - T 78 -5.7 -4.92669 | gap 1, opp_overlap 2906802, overlap 2906799 TACATAAAAAAATAA GGCAC-TATA AAAT TATAAGTGCC TTTTCTCCTTATTAA TERM 3405 2906802 - 2906824 + T 72 -5.7 -4.61747 | gap 1, opp_overlap 2906802 2906799 TACATAAAAAAATAA GGCAC-TATA AAAT TATAAGTGCC TTTTCTCCTTATTAA TERM 3406 2906984 - 2906939 - T 86 -10.4 -3.17212 | gap 1, opp_overlap 2906931 2906939 2906943 2906982, overlap 2906943 CTACCATTTGATTAA TAAATCAATATATTTTT-TAA TAATT TTATAAAAATATATTGATTTA TTTGATAATAATTAA TERM 3407 2906939 - 2906984 + T 90 -10.4 -3.82031 | gap 1, opp_overlap 2906939 2906943, overlap 2906931 2906943 2906982 CTACCATTTGATTAA TAAATCAATATATTTTT-TAA TAATT TTATAAAAATATATTGATTTA TTTGATAATAATTAA TERM 3408 2906980 - 2906943 - T 72 -6.8 -4.25056 | gap 1, opp_overlap 2906931 2906939 2906943, overlap 2906939 CATTTGATTAATAAA TCAATATATTTTT-TAA TAATT TTATAAAAATATATTGA TTTATTTGATAATAA TERM 3409 2906943 - 2906980 + T 76 -6.8 -4.51743 | gap 1, opp_overlap 2906943 2906939, overlap 2906931 2906939 CATTTGATTAATAAA TCAATATATTTTT-TAA TAATT TTATAAAAATATATTGA TTTATTTGATAATAA CKL_2831 2907247 - 2907011 - | hypothetical protein TERM 3410 2907529 - 2907560 + H 70 -8.3 -3.109 | gap 1, opp_overlap 2907536 2907538, overlap 2907528 2907530 TGTCGGTTATATTTT TAT-GATACACAAC TTTAT GTTGTGTATCAATA CTTTCTTAAACCTTT TERM 3411 2907530 - 2907558 + H 76 -9 -3.10512 | opp_overlap 2907536 2907538, overlap 2907529 2907528 GTCGGTTATATTTTT ATGATACACAAC TTTAT GTTGTGTATCAA TACTTTCTTAAACCT TERM 3412 2907702 - 2907688 - g 81 -2.9 -5.75822 | TAGAAATGAAAAAAA TCTTT TACAG AAAGA AATAGCTAAAAAACT CKL_2832 2907647 - 2908039 + | transcriptional regulator CKL_2833 2909087 - 2908167 - | glycosyl hydrolase TERM 3413 2908662 - 2908676 + g 70 -4.3 -4.91285 | TACTTCATAATGAGC TATCC ATAAA GGATA TTTTGTTATATTACT CKL_2834 2909294 - 2909743 + | hypothetical protein CKL_2835 2909852 - 2910127 + | hypothetical protein TERM 3414 2910209 - 2910175 - T 93 -12.4 -2.86343 | opp_overlap 2910175 2910174 2910180 2910208, overlap 2910180 AGCTTAATCATTATA GAAAATAAGCACCTAT CTT ATCAGTGCTTATTTTC ATTATATACATATAT TERM 3415 2910175 - 2910209 + T 78 -10.2 -2.7218 | opp_overlap 2910175 2910180, overlap 2910174 2910180 2910208 AGCTTAATCATTATA GAAAATAAGCACCTAT CTT ATCAGTGCTTATTTTC ATTATATACATATAT TERM 3416 2910204 - 2910180 - T 74 -6.5 -4.59027 | opp_overlap 2910175 2910174 2910180, overlap 2910175 AATCATTATAGAAAA TAAGCACCTAT CTT ATCAGTGCTTA TTTTCATTATATACA CKL_2836 2910922 - 2910344 - | hypothetical protein TERM 3417 2910894 - 2910884 - G 70 -4 -4.94168 | ACACAACAAAATAAA CAAT ACA ATTG CCCATATCCTCATAT TERM 3418 2911059 - 2911005 - R 78 -9.8 -2.69207 | opp_overlap 2911009 2911019, overlap 2911019 2911043 CACATTATTAAATAT TTCAAAATTAAAAAGTGTTAGATT TTACTTC AATCTAACACTTTTTAATTCTTTA CAAAGTGAACTAAAT TERM 3419 2911009 - 2911055 + r 100 -12.8 -3.55563 | opp_overlap 2911005 2911019 2911043, overlap 2911019 TTATTAAATATTTCA AAATTAAAAAGTGTTAGATT TTACTTC AATCTAACACTTTTTAATTC TTTACAAAGTGAACT TERM 3420 2911045 - 2911019 - R 91 -8.2 -5.0925 | opp_overlap 2911009 2911019, overlap 2911005 2911043 TTTCAAAATTAAAAA GTGTTAGATT TTACTTC AATCTAACAC TTTTTAATTCTTTAC TERM 3421 2911019 - 2911045 + r 91 -8.2 -5.04356 | opp_overlap 2911019 2911005 2911043, overlap 2911009 TTTCAAAATTAAAAA GTGTTAGATT TTACTTC AATCTAACAC TTTTTAATTCTTTAC CKL_2837 2911643 - 2911029 - | hypothetical protein TERM 3422 2912178 - 2912166 - g 79 -3.5 -5.58209 | TTAAATGGAAAAAAA TATTA TTA TAATA AAAATAGTGCTGAAA CKL_2838 2911869 - 2912720 + | hydrolase TERM 3423 2912752 - 2912785 + T 76 -9.1 -2.96979 | opp_overlap 2912760, overlap 2912760 CTTTTGCATTCCAAT TTAAAAAATCAAGGT ATTT GCCTTGATTTTTCAA TATAATTAATCTTCA TERM 3424 2912760 - 2912777 + T 77 -6.3 -4.72333 | opp_overlap 2912760, overlap 2912752 TTCCAATTTAAAAAA TCAAGGT ATTT GCCTTGA TTTTTCAATATAATT TERM 3425 2912777 - 2912760 - T 80 -5.6 -5.15969 | opp_overlap 2912752 2912760 TTCCAATTTAAAAAA TCAAGG TATTTG CCTTGA TTTTTCAATATAATT CKL_2839 2913975 - 2912791 - | cyclopropane-fatty-acyl-phospholipid synthase-related protein CKL_2840 2915486 - 2914143 - | hypothetical protein TERM 3426 2915634 - 2915608 - R 87 -8.1 -4.72986 | opp_overlap 2915608 2915602 TATTTGTATTAAAAA GAGCTCTGGAT AAAAA ATCCAAAACTC TTTATATTTATAATT CKL_2841 2916868 - 2915864 - | hypothetical protein TERM 3427 2916157 - 2916126 - G 74 -8.8 -3.32993 | opp_overlap 2916128 2916132, overlap 2916127 TCAGTTACATATGAA TCTGAAGGTATTCC AATT GGAATACCTTCATC TATTAAGAATGAATT TERM 3428 2916156 - 2916127 - G 89 -12.3 -2.59475 | opp_overlap 2916128 2916132, overlap 2916126 CAGTTACATATGAAT CTGAAGGTATTCC AATT GGAATACCTTCAT CTATTAAGAATGAAT TERM 3429 2916128 - 2916155 + g 100 -15.8 -3.07895 | opp_overlap 2916127 2916126, overlap 2916132 AGTTACATATGAATC TGAAGGTATTCC AATT GGAATACCTTCA TCTATTAAGAATGAA TERM 3430 2916132 - 2916151 + g 87 -10.8 -3.37493 | opp_overlap 2916127 2916126, overlap 2916128 ACATATGAATCTGAA GGTATTCC AATT GGAATACC TTCATCTATTAAGAA TERM 3431 2916907 - 2916893 - R 70 -2.9 -5.19879 | CTCCAAATATAAAAA TAACT GTCAA AGTTA ATATTCCCAAATATT gmk 2917481 - 2916924 - | hypothetical protein TERM 3432 2917600 - 2917583 - R 100 -9.9 -5.24989 | TTATATATGAAAAAA GAGCTCT GCAT AGAGCTC TCAAATTAATCATCC CKL_2843 2917848 - 2917606 - | hypothetical protein CKL_2844 2918420 - 2918043 - | hypothetical protein TERM 3433 2918680 - 2918657 - R 85 -3.2 -6.04324 | opp_overlap 2918658, overlap 2918650 2918658 CCAAAAAAGAAAAAA TTCCTTTTCT TTAA AGAAAAAGAT TTAATAATTATTTAA TERM 3434 2918679 - 2918658 - R 72 -6.7 -4.18934 | opp_overlap 2918658, overlap 2918650 2918657 CAAAAAAGAAAAAAT TCCTTTTCT TTAA AGAAAAAGA TTTAATAATTATTTA TERM 3435 2918748 - 2918723 - R 81 -8.3 -4.39954 | CAATAACAACATAAA GCCTGCACCCT AATC AAAGTACAGGC TTCTATCACATTGCT CKL_2845 2918947 - 2918768 - | small acid-soluble spore protein TERM 3436 2919126 - 2919158 + H 100 -14.4 -4.15854 | opp_overlap 2919128 2919133, overlap 2919128 2919133 TCATTGGTTCTAATT TATAAAAGCTCTGG CAACC CCAGAGCTTTTATG TTTTAAAATCAATTT TERM 3437 2919128 - 2919156 + H 100 -14.8 -3.67188 | opp_overlap 2919128 2919133, overlap 2919126 2919133 ATTGGTTCTAATTTA TAAAAGCTCTGG CAACC CCAGAGCTTTTA TGTTTTAAAATCAAT TERM 3438 2919156 - 2919128 - H 100 -14.8 -2.52543 | opp_overlap 2919126 2919128 2919133, overlap 2919133 ATTGGTTCTAATTTA TAAAAGCTCTGG CAACC CCAGAGCTTTTA TGTTTTAAAATCAAT TERM 3439 2919151 - 2919133 - H 93 -10.3 -4.4715 | opp_overlap 2919128 2919126 2919133, overlap 2919128 TTCTAATTTATAAAA GCTCTGG CAACC CCAGAGC TTTTATGTTTTAAAA TERM 3440 2919133 - 2919151 + H 100 -10.3 -4.89567 | opp_overlap 2919133 2919128, overlap 2919128 2919126 TTCTAATTTATAAAA GCTCTGG CAACC CCAGAGC TTTTATGTTTTAAAA CKL_2846 2919401 - 2919583 + | small acid-soluble spore protein TERM 3441 2919594 - 2919618 + T 95 -11.6 -4.44277 | opp_overlap 2919599 AATAGACTATTTGTA TCACACAAGA CTGGT TCTTGTGTGA TTTTCAATTTTGATA CKL_2847 2921215 - 2920130 - | spore germination protein (gerKB ) gerKA4 2922690 - 2921212 - | GerKA4 CKL_2849 2922886 - 2923461 + | transcriptional regulator TERM 3442 2924059 - 2924071 + G 72 -3.3 -5.13343 | TTATTAGGAATGTTT TCCTG GCG CTGGA TTTTCTTTTCCCTTG CKL_2850 2923549 - 2924973 + | efflux pump CKL_2851 2925078 - 2925245 + | hypothetical protein TERM 3443 2925244 - 2925260 + T 100 -8 -5.71983 | TGTGGGAAAGAATTT GAGAGC AAGAA GCTCTC TTTTTTTATGATTAA CKL_2852 2925896 - 2925366 - | signal peptidase TERM 3444 2926022 - 2925992 - R 100 -12 -4.42788 | opp_overlap 2925992 2925995 GTTAATTTTATAAAA TAAGCCTACCGAGA AAA TCCCAATAGGCTTA TTCATATTACAATAC CKL_2853 2926285 - 2926040 - | hypothetical protein TERM 3445 2926520 - 2926530 + r 71 -2.6 -5.48063 | ATGCCTGCTTTGTGC TAAA AAG TTTA TTTTTTATATTGAAT TERM 3446 2926727 - 2926705 - R 95 -8.5 -5.186 | opp_overlap 2926705 TAAAAGATATAAAAA TAAGCACCC TAAAC GAGTGCTTA TTTTTATGCAATATT TERM 3447 2926705 - 2926727 + r 80 -6.3 -4.87273 | opp_overlap 2926705 TAAAAGATATAAAAA TAAGCACCC TAAAC GAGTGCTTA TTTTTATGCAATATT CKL_2854 2927083 - 2926865 - | hypothetical protein TERM 3448 2926941 - 2926951 + g 78 -6.8 -4.46404 | opp_overlap 2926940 2926941 TCAAACGTAATCAAT CCTG GAT CAGG TTTTGGTATTACTTC TERM 3449 2927390 - 2927348 - H 95 -12.5 -3.1585 | gap 1, opp_overlap 2927348 2927355, overlap 2927355 TGATTTAATCTAATA TGA-AAAATAAGTACTTGGT ATTT ACCAAATACTTATTTTATCA TTTATAAACCTTAGA TERM 3450 2927348 - 2927390 + H 91 -10.3 -3.89614 | gap 1, opp_overlap 2927348 2927355, overlap 2927355 TGATTTAATCTAATA TGA-AAAATAAGTACTTGGT ATTT ACCAAATACTTATTTTATCA TTTATAAACCTTAGA TERM 3451 2927382 - 2927355 - H 100 -10.8 -4.88228 | opp_overlap 2927348 2927355, overlap 2927348 ATCTAATATGAAAAA TAAGTACTTGGT ATTT ACCAAATACTTA TTTTATCATTTATAA TERM 3452 2927355 - 2927382 + H 90 -8.6 -4.64846 | opp_overlap 2927355 2927348, overlap 2927348 ATCTAATATGAAAAA TAAGTACTTGGT ATTT ACCAAATACTTA TTTTATCATTTATAA TERM 3453 2927409 - 2927444 + H 73 -7.8 -3.85539 | opp_overlap 2927410 2927412 2927414 2927417, overlap 2927410 2927412 ATAAACCTTAGAATT AGATATAATTATAGTC TTTT GACTCTAATTATATCC TTTACTCTAAGTATA TERM 3454 2927410 - 2927443 + H 89 -11.3 -2.90841 | opp_overlap 2927410 2927412 2927414 2927417, overlap 2927409 2927412 TAAACCTTAGAATTA GATATAATTATAGTC TTTT GACTCTAATTATATC CTTTACTCTAAGTAT TERM 3455 2927443 - 2927410 - H 89 -11.3 -2.85508 | opp_overlap 2927410 2927409 2927412, overlap 2927412 2927414 2927417 TAAACCTTAGAATTA GATATAATTATAGTC TTTT GACTCTAATTATATC CTTTACTCTAAGTAT TERM 3456 2927441 - 2927412 - H 70 -8.1 -2.97017 | opp_overlap 2927410 2927409 2927412, overlap 2927410 2927414 2927417 AACCTTAGAATTAGA TATAATTATAGTC TTTT GACTCTAATTATA TCCTTTACTCTAAGT TERM 3457 2927412 - 2927441 + H 70 -8.1 -3.00138 | opp_overlap 2927412 2927410 2927414 2927417, overlap 2927410 2927409 AACCTTAGAATTAGA TATAATTATAGTC TTTT GACTCTAATTATA TCCTTTACTCTAAGT TERM 3458 2927952 - 2927976 + H 81 -8.6 -4.14598 | overlap 2927946 ATTGCTTTTTCACCA CACTGGGGAT TATTC ATCTCCGGTG TTTAATTTCATTACA CKL_2855 2928114 - 2928302 + | tautomerase-related protein CKL_2856 2928465 - 2928908 + | transposase CKL_2857 2928914 - 2929417 + | transposase CKL_2858 2929426 - 2929695 + | transposase TERM 3459 2930103 - 2930130 + T 100 -12.8 -4.2535 | TACACAGGGTAAGGG TCTGACGGGTGA TGTG TTGCCCGTCAGA TTTTCCATGTAATGT CKL_2859 2930968 - 2930126 - | recombinase CKL_2860 2931637 - 2930993 - | recombinase TERM 3460 2931172 - 2931189 + g 70 -8.3 -3.01791 | CCGAATGAAAGCCGT AGGGCGG TCTG CCGCCCA TCTTGAAGCCCCGCT TERM 3461 2931394 - 2931384 - G 71 -5.4 -4.58663 | ATCATGCCCGAAAAA TCCA GAA TGGA ACGGCTGATACGGTC TERM 3462 2931635 - 2931680 + g 72 -4.7 -4.77165 | opp_overlap 2931666, overlap 2931637 GTCTATTCGATTGTT CATTTCGTAGCTCCTTTTCTT AAAA AAGAAACGGAGCTGCTGACAG TTTTATTATACCGCC TERM 3463 2931637 - 2931679 + r 70 -7.9 -3.45817 | gap 1, opp_overlap 2931666, overlap 2931635 CTATTCGATTGTTCA TTTC-GTAGCTCCTTTTCTT AAAA AAGAAACGGAGCTGCTGACA GTTTTATTATACCGC TERM 3464 2931705 - 2931666 - R 100 -17.2 -5.04249 | opp_overlap 2931637 2931635 TTCTTAAAAAAGAAA CGGAGCTGCTGACAGTTT TATT ATACCGCCAGCAGCCCCG CAAATCAATGTTGTA CKL_2861 2931911 - 2931726 - | hypothetical protein TERM 3465 2931871 - 2931887 + g 82 -5.1 -5.38249 | opp_overlap 2931871, overlap 2931864 TTCTTTCCCTGAAAA GAAACGG TTT CGGTTTC TTTTTTGTAGTTGAT TERM 3466 2931963 - 2931949 - R 75 -8.5 -3.42056 | ATTTTCAAGGTACAA GCCGC TCATT GCGGC GAAAAGTATTTACTA CKL_2862 2932903 - 2932079 - | plasmid recombination-related protein TERM 3467 2933009 - 2933023 + r 75 -7.1 -4.09551 | AAACCTTGTGATACC GGGCT TTTCC AGCCC TTATTTGTCCGCTTT CKL_2863 2933413 - 2933024 - | hypothetical protein TERM 3468 2933213 - 2933203 - G 71 -8.2 -3.31144 | TTTCCAGCGGCAGAA CCGC ATG GCGG AACCATGTACAGCAG TERM 3469 2933507 - 2933540 + H 86 -10.3 -3.16039 | gap 1, opp_overlap 2933513 CATTGGCACGCTCCC CAGCAACTTCGGACCA ACG TGGCCCGAAG-TGCGG TTCATGGCAGTGCTT TERM 3470 2933535 - 2933513 - H 100 -14.2 -3.14344 | opp_overlap 2933507 CACGCTCCCCAGCAA CTTCGGACCA ACG TGGCCCGAAG TGCGGTTCATGGCAG TERM 3471 2933705 - 2933690 - H 75 -3.3 -5.46698 | opp_overlap 2933692, overlap 2933682 CCGAAAATGAAAAAA TTCCA TGCTTG TGGAA AGGTATGGTATAATG TERM 3472 2934022 - 2933986 - g 100 -16.7 -5.8901 | opp_overlap 2933994 ACAGAAAACAAAAAA CACCCAAACGCCGATCT TGC AGACCTGCGTTTGAGTG ATGGCATGATAGACC CKL_2864 2933718 - 2934023 + | hypothetical protein CKL_2865 2934028 - 2934369 + | hypothetical protein TERM 3473 2934470 - 2934430 - f 95 -12.1 -3.84712 | gap 1, opp_overlap 2934433, overlap 2934432 GAAGCCCACACTAAA CAGCA-AGGTTCCCATGT CCTTTC ACATGGGAACCTCTGCCA CACGGCGAGTGGGGG TERM 3474 2934468 - 2934432 - f 100 -14.7 -3.50588 | gap 1, opp_overlap 2934433, overlap 2934430 AGCCCACACTAAACA GCA-AGGTTCCCATGT CCTTTC ACATGGGAACCTCTGC CACACGGCGAGTGGG TERM 3475 2934490 - 2934512 + F 100 -14.2 -2.52795 | GCGAGTGGGGGGAGT TCCAGAGGTG GAA CGCCTCTGGA TACCTTGCGGCACTT TERM 3476 2934523 - 2934549 + F 93 -10.8 -3.80625 | overlap 2934524 2934542 CTGGATACCTTGCGG CACTTCGGGCCA AGT TGGCCCGAAGAA TTTGGATTGTGAAGG TERM 3477 2934524 - 2934548 + F 100 -14.3 -2.88054 | overlap 2934523 2934542 TGGATACCTTGCGGC ACTTCGGGCCA AGT TGGCCCGAAGA ATTTGGATTGTGAAG CKL_2866 2934669 - 2934953 + | hypothetical protein CKL_2867 2935214 - 2934978 - | hypothetical protein TERM 3478 2935047 - 2935066 + g 74 -9.3 -3.01001 | opp_overlap 2935061, overlap 2935042 2935061 TTTCATATACGCCCT GTCCGCT GATGAA AGCGGAC TGTCCTTTGCGGCTC TERM 3479 2935121 - 2935149 + g 93 -10.9 -4.07568 | opp_overlap 2935121 TCCTGCCGCTTAAAA CGCCTTTGCCCTC CAC GGCGGCAACGGCG TTTTCACGGCAACGC TERM 3480 2935149 - 2935121 - G 82 -8.7 -4.07568 | opp_overlap 2935121 TCCTGCCGCTTAAAA CGCCTTTGCCCTC CAC GGCGGCAACGGCG TTTTCACGGCAACGC TERM 3481 2935203 - 2935189 - G 71 -8.6 -2.93633 | opp_overlap 2935189, overlap 2935180 GTATAACACACTACA CTTTGC TCC GCAAAG TTGTGTGCCAAGGGG TERM 3482 2935189 - 2935203 + g 76 -8.6 -3.48276 | opp_overlap 2935189 2935180 GTATAACACACTACA CTTTGC TCC GCAAAG TTGTGTGCCAAGGGG TERM 3483 2935237 - 2935271 + rH 81 -7.1 -4.77165 | opp_overlap 2935238, overlap 2935238 TCCCCACAACAAAAA AGGCTGCATATTCCC TCTGC GAGAACATGCAGCCC TTTTGTTGTCAGCAG TERM 3484 2935270 - 2935238 - RH 100 -15 -5.55769 | opp_overlap 2935238 2935237 CCCCACAACAAAAAA GGCTGCATATTCCC TCTGC GAGAACATGCAGCC CTTTTGTTGTCAGCA TERM 3485 2935238 - 2935270 + rH 88 -10.6 -3.45817 | opp_overlap 2935238, overlap 2935237 CCCCACAACAAAAAA GGCTGCATATTCCC TCTGC GAGAACATGCAGCC CTTTTGTTGTCAGCA TERM 3486 2935326 - 2935352 + rH 76 -6.6 -4.56775 | opp_overlap 2935330 TCCTTGTAAACTGAC CTAAGTGGAATT GTA AATACCACATAG TTTTTGCACCAAAAT CKL_2869 2936841 - 2935636 - | recombinase-related protein CKL_2868 2935406 - 2935729 + | hypothetical protein TERM 3487 2935803 - 2935815 + gT 76 -3.3 -5.40474 | overlap 2935814 TACTTTTAATCGAGT GCATG GTG CAGGC TTTTTTTGAAAGGCT TERM 3488 2935950 - 2935969 + gT 73 -7.8 -3.6512 | GTTGTTTTTGCTTTG GCGCGGTG CGGG TATCGCGC TTTAACAGTTGTTTA CKL_2870 2937515 - 2936871 - | transposase TERM 3489 2937581 - 2937569 - R 74 -4.1 -5.24129 | opp_overlap 2937578 2937579, overlap 2937570 2937579 2937580 TTGTTGCATAAAAAA CCCTT TTA AAGGA AATGGCGGCTTTGTT TERM 3490 2937614 - 2937579 - R 95 -12.1 -3.5771 | gap 2, opp_overlap 2937578 2937579, overlap 2937570 2937569 2937580 2937584 AAAAACCCTTTTAAA GGAAATGGCGGCTTTGT TTTC ACAA-GCCGCCA-TTCC GCATTCGTCTAATTA TERM 3491 2937579 - 2937616 + r 70 -8.6 -2.59267 | opp_overlap 2937570 2937569 2937579 2937580 2937584, overlap 2937578 AAAAACCCTTTTAAA G-GAAATGGCGGCTTTGT TTTC ACAA-GCCGCCATTCCGC ATTCGTCTAATTAAC TERM 3492 2937614 - 2937580 - R 100 -14.5 -2.73903 | gap 1, opp_overlap 2937579 2937578, overlap 2937569 2937579 2937584 AAAACCCTTTTAAAG GAAATGGCGGCTTTGT TTTC ACAA-GCCGCCATTCC GCATTCGTCTAATTA TERM 3493 2937610 - 2937584 - R 100 -11.7 -4.05788 | gap 1, opp_overlap 2937579 2937578, overlap 2937579 2937580 CCCTTTTAAAGGAAA TGGCGGCTTTGT TTTC ACAA-GCCGCCA TTCCGCATTCGTCTA CKL_2871 2938769 - 2937768 - | hypothetical protein TERM 3494 2939199 - 2939170 - g 72 -7.2 -3.86312 | gap 1, overlap 2939172 ATTTATAATGAACAA GATGTTTGCCGAG CCATT CTCGGCGAACA-C GGAGATACGCGGTTT TERM 3495 2939198 - 2939172 - g 87 -10.9 -3.51235 | overlap 2939170 TTATAATGAACAAGA TGTTTGCCGAG CCATT CTCGGCGAACA CGGAGATACGCGGTT CKL_2872 2938888 - 2939439 + | transcriptional regulator TERM 3496 2939608 - 2939633 + T 95 -6.1 -5.63645 | opp_overlap 2939609, overlap 2939609 2939629 CGCTAACCGGCAAGC AGGGCAACTGT GGCC ACAGTTGCACA TTTTTTGTATTTTGC TERM 3497 2939632 - 2939609 - T 75 -9.6 -2.73542 | opp_overlap 2939608 2939609 2939629 GCTAACCGGCAAGCA GGGCAACTGT GGCC ACAGTTGCAC ATTTTTTGTATTTTG TERM 3498 2939609 - 2939632 + T 87 -9.6 -3.95747 | opp_overlap 2939609, overlap 2939608 2939629 GCTAACCGGCAAGCA GGGCAACTGT GGCC ACAGTTGCAC ATTTTTTGTATTTTG TERM 3499 2939704 - 2939726 + T 81 -9.8 -3.00946 | overlap 2939701 2939706 CCCCAAACCCTGCCA CATCGGGCCG ACT TGACCCGATG TCATTTCTCCGGCGG CKL_2873 2939948 - 2939727 - | hypothetical protein TERM 3500 2940211 - 2940190 - g 70 -6.5 -4.30978 | gap 1, opp_overlap 2940190 2940189 CGGAAGCCATGAAAA GCCTCGAGCC ACA GGCAC-AGGC GTTCTGGAAATCTAT CKL_2874 2940078 - 2940284 + | hypothetical protein CKL_2875 2940675 - 2940367 - | hypothetical protein TERM 3501 2940842 - 2940817 - R 72 -3.3 -5.31519 | ATATGTAAATAAAAA TAAGCACCC TAAATGAC GAGTGCCTA TTTTATATAATATTA CKL_2876 2943513 - 2942035 - | cell wall binding protein TERM 3502 2943896 - 2943874 - H 72 -6.4 -4.40804 | overlap 2943875 TAGTATTTTAGAAAA CGTATTACTC CTG AAGTAATACA ATCACATGTTGGTCA CKL_2877 2944147 - 2945070 + | hypothetical protein CKL_2878 2945603 - 2945412 - | hypothetical protein TERM 3503 2945759 - 2945736 - R 100 -12.5 -4.41353 | opp_overlap 2945740 TTACATATATCAAAA GGCACCTGA TTAAGT TCAGGTGCC TTACACAATATATAG CKL_2879 2945975 - 2945787 - | hypothetical protein TERM 3504 2946118 - 2946102 - R 77 -2.2 -5.88565 | opp_overlap 2946102 TTCATAAGAAAAAAA GGGG TATTCTAAG CCCC TTAACTACATCTTAT TERM 3505 2946179 - 2946154 - R 100 -11.3 -4.75174 | overlap 2946167 TATGCAATTCAAAAA TCCCTTAGATA TATA TACCTAAGGGA TAAAATATTTACTAA CKL_2880 2946392 - 2946195 - | hypothetical protein TERM 3506 2947026 - 2947014 - g 80 -6.3 -4.80453 | GCATTAGAAAAGAAA GGTTT GAT AAACC GCGAAATGAACAAAA CKL_2881 2946792 - 2947220 + | hypothetical protein TERM 3507 2947328 - 2947314 - g 75 -2.8 -5.59655 | opp_overlap 2947314, overlap 2947304 CAAAGCAACAAAAAA GCAC TCTTGTC GTGC TTATGCTTGGTGCGT CKL_2882 2947295 - 2949160 + | transporter protein TERM 3508 2949827 - 2949842 + G 72 -2.6 -5.42259 | TCTTTTCTAATAATG GTTATT CTAG AATGAC TTTTTTTACAGATAA CKL_2883 2949619 - 2949900 + | superoxide dismutase TERM 3509 2950395 - 2950372 - f 71 -4.6 -4.92757 | overlap 2950367 2950389 TTAGCAATAATAAAA GCACCTACCT ATTA AAATAAGTGC TCTTATGGCTGTGAA TERM 3510 2950690 - 2950724 + G 76 -7.2 -4.32669 | overlap 2950691 TAATTCTTTTACTTT CGGCTGTGCTTGGA CTTTTTC TTCAAGTACAGCCA TTCTTTTCTCCAATT TERM 3511 2950691 - 2950723 + G 83 -10.7 -3.18517 | overlap 2950690 AATTCTTTTACTTTC GGCTGTGCTTGGA CTTTTTC TTCAAGTACAGCC ATTCTTTTCTCCAAT CKL_2884 2950646 - 2950903 + | hypothetical protein CKL_2885 2951712 - 2951170 - | hypothetical protein CKL_2886 2951866 - 2951687 - | hypothetical protein TERM 3512 2951889 - 2951932 + r 81 -9.9 -3.01915 | opp_overlap 2951889 2951923, overlap 2951888 2951886 TGTATTTCTGTAAAA TCCCATACTAGCTATTTTA CTATGA TAAAATAACTAGTATGGAA CTATTTTTGTCACCC TERM 3513 2951932 - 2951889 - R 100 -15 -4.08767 | opp_overlap 2951889 2951888 2951886, overlap 2951923 TGTATTTCTGTAAAA TCCCATACTAGCTATTTTAC TATG ATAAAATAACTAGTATGGAA CTATTTTTGTCACCC CKL_2887 2952176 - 2952000 - | hypothetical protein TERM 3514 2952801 - 2952826 + r 91 -10.6 -4.18018 | opp_overlap 2952801 AATGGTTGAATTTAA GAGATGTGTA AAAACC TACACATCTC TTTTCGATAAAACAA TERM 3515 2952826 - 2952801 - R 93 -11.3 -3.17571 | opp_overlap 2952801 AATGGTTGAATTTAA GAGATGTGTAA AAAC CTACACATCTC TTTTCGATAAAACAA TERM 3516 2953283 - 2953259 - R 85 -7.2 -4.88228 | ACCTAACATGAAAAA TAAGCACTAG TTTCC CCAGTGCCTA TCTACGACATACACA TERM 3517 2953642 - 2953621 - R 100 -6.7 -5.68438 | opp_overlap 2953614 2953621, overlap 2953614 2953609 TTATTAAAGAAAAAA TTTCTCCTT TAAA AAAGAGAAA TATTTAATAATTACT CKL_2888 2954031 - 2953675 - | hypothetical protein TERM 3518 2954155 - 2954124 - R 74 -4.7 -5.02201 | gap 1, opp_overlap 2954124 AAAACACTACAAAAA CAAAGTA-AGCTAT AAAAG ATAACTTTACTTTG TTTTTTACTTTATAC TERM 3519 2954124 - 2954155 + r 71 -2.5 -5.42514 | gap 1, opp_overlap 2954124 AAAACACTACAAAAA CAAAGT-AAGCTAT AAAAG ATAACTTTACTTTG TTTTTTACTTTATAC CKL_2889 2954602 - 2954210 - | hypothetical protein CKL_2890 2955225 - 2955605 + | hypothetical protein TERM 3520 2955703 - 2955685 - f 74 -3.8 -5.33848 | opp_overlap 2955688, overlap 2955687 2955688 AGTATAATTAAAAAA TATCAGCA GCT TGCTGTCA GTTTGACATTCGCCT TERM 3521 2955858 - 2955890 + F 100 -10.5 -4.63218 | opp_overlap 2955868, overlap 2955860 TCTGTTGCTATTATC GCGCGGAGAACGCTC ATC GGGCGTTTTCCGCTA TTTTATTACCCGGCA TERM 3522 2955860 - 2955888 + F 100 -17.5 -3.93367 | opp_overlap 2955868, overlap 2955858 TGTTGCTATTATCGC GCGGAGAACGCTC ATC GGGCGTTTTCCGC TATTTTATTACCCGG CKL_2891 2955940 - 2956173 + | hypothetical protein TERM 3523 2956613 - 2956579 - T 100 -10.8 -5.52384 | opp_overlap 2956579 CTGCTATGAAAAAAA GGAACACCAAACAC TCTAACT GTGTTTGGCGCCCC CTTATGCCTAGATAC CKL_2892 2956933 - 2956706 - | hypothetical protein TERM 3524 2957190 - 2957207 + r 88 -6.9 -5.2166 | GATTATCATTTCTAC GGCTACC TTCT GGAAGCC TTTTTTACATTATTC TERM 3525 2957472 - 2957495 + r 86 -11.1 -2.81045 | opp_overlap 2957472, overlap 2957475 AAAACATAATCAAAA TAAGCAGGG TACTTT CCCTGCTTA TAGTATTATACCTAA TERM 3526 2957495 - 2957472 - R 100 -11.1 -4.6008 | opp_overlap 2957472 2957475 AAAACATAATCAAAA TAAGCAGGG TACTTT CCCTGCTTA TAGTATTATACCTAA TERM 3527 2957475 - 2957492 + r 76 -8.4 -3.54771 | opp_overlap 2957472, overlap 2957472 ACATAATCAAAATAA GCAGGG TACTTT CCCTGC TTATAGTATTATACC TERM 3528 2957663 - 2957624 - R 77 -6.1 -4.72986 | gap 1, opp_overlap 2957629, overlap 2957644 TAGCTTTACCAAAAA TACTATCTTTA-TACAAA AAATA TTTGTAATAGAGATAGTA TGAATAGCAAAATAC TERM 3529 2957718 - 2957751 + r 86 -9 -4.3898 | opp_overlap 2957720 2957725, overlap 2957720 2957725 TAATATATTTTAATC TATAAAAGCTCTGG CAAATA CCAGGGCTTTTATC TTTTCTAGGAGTAAT TERM 3530 2957720 - 2957749 + r 93 -11.6 -3.80133 | opp_overlap 2957720 2957725, overlap 2957718 2957725 ATATATTTTAATCTA TAAAAGCTCTGG CAAATA CCAGGGCTTTTA TCTTTTCTAGGAGTA TERM 3531 2957749 - 2957720 - R 78 -10.1 -2.54702 | opp_overlap 2957720 2957718 2957725, overlap 2957725 ATATATTTTAATCTA TAAAAGCTCTGGC AAAT ACCAGGGCTTTTA TCTTTTCTAGGAGTA TERM 3532 2957725 - 2957744 + r 85 -7.1 -4.94487 | opp_overlap 2957720 2957725, overlap 2957720 2957718 TTTTAATCTATAAAA GCTCTGG CAAATA CCAGGGC TTTTATCTTTTCTAG TERM 3533 2957744 - 2957725 - R 72 -5.6 -4.4715 | opp_overlap 2957725 2957720 2957718, overlap 2957720 TTTTAATCTATAAAA GCTCTGGC AAAT ACCAGGGC TTTTATCTTTTCTAG CKL_2893 2957985 - 2957803 - | hypothetical protein TERM 3534 2958102 - 2958077 - R 88 -5.3 -5.71712 | opp_overlap 2958077, overlap 2958081 TTTTATATAAAAAAA TAAAGCCCCGA AAAA CCGGGGCAATA ATTATTTCTATGATG TERM 3535 2958098 - 2958081 - R 100 -10.5 -5.29742 | opp_overlap 2958077, overlap 2958077 ATATAAAAAAATAAA GCCCCGA AAAA CCGGGGC AATAATTATTTCTAT CKL_2894 2958325 - 2958152 - | hypothetical protein TERM 3536 2958258 - 2958239 - G 89 -9.3 -4.50976 | opp_overlap 2958238 2958236 TCCTATATCAGAAAA GGAGAGG TATTCG CCTCTCC CTGGTTTATCTTTAC CKL_2895 2958516 - 2958343 - | hypothetical protein TERM 3537 2958642 - 2958617 - R 75 -5.5 -4.89339 | opp_overlap 2958617 AATTATGCACAAAAA TAAGCACCC TAGATGAC GAGTGCTTA TTTCTTATATTGGGC TERM 3538 2958973 - 2958938 - R 74 -4.1 -5.28983 | opp_overlap 2958938 2958941, overlap 2958941 TTTAAAATATAAAAA TAAGATAAGCACCTA AATATG TGGATGCTTATCTTG TTGCTTTATACACTA TERM 3539 2958970 - 2958941 - R 75 -5.8 -4.69512 | opp_overlap 2958938 2958941, overlap 2958938 AAAATATAAAAATAA GATAAGCACCTA AATATG TGGATGCTTATC TTGTTGCTTTATACA TERM 3540 2959072 - 2959049 - R 72 -6 -4.58685 | AAATTTCCTTAAAAA TAAGCACCAG TTTC CCAGTGCCTA TCTCCGACATACACA CKL_2896 2959512 - 2959243 - | hypothetical protein CKL_2897 2960455 - 2959886 - | hypothetical protein CKL_2898 2960764 - 2960603 - | hypothetical protein CKL_2899 2960930 - 2960769 - | hypothetical protein TERM 3541 2961008 - 2960982 - R 77 -5.2 -5.00884 | opp_overlap 2960985, overlap 2960985 ACTTTCTTGAAAAAA TAAGTACCAAAA TAA TATTGGTACTTT GTGTGATATTAAGAG TERM 3542 2960985 - 2961005 + r 72 -6.9 -4.13591 | opp_overlap 2960982 2960985 TTCTTGAAAAAATAA GTACCAAAA TAA TATTGGTAC TTTGTGTGATATTAA TERM 3543 2961005 - 2960985 - R 76 -6.9 -4.61482 | opp_overlap 2960985, overlap 2960982 TTCTTGAAAAAATAA GTACCAAAA TAA TATTGGTAC TTTGTGTGATATTAA TERM 3544 2961177 - 2961153 - R 86 -7.2 -5.186 | opp_overlap 2961153 TAAAAGATATAAAAA TAAGCACCCA GGTGA CGGGTACTTA TTTTTGATGACGTTG CKL_2900 2961944 - 2961786 - | hypothetical protein CKL_2901 2961996 - 2962556 + | hypothetical protein TERM 3545 2962710 - 2962739 + T 100 -13.1 -5.36364 | TAATCTTACATATTC TATTCATGCGGAA CCTC TTTCGCATGAATA TTTTTATATTTTTCA TERM 3546 2962789 - 2962813 + T 80 -8.6 -4.04295 | opp_overlap 2962791, overlap 2962791 ATCATTTTTTCATTA TACCGGGGAT TATCT ATCCTCGGTG TTTAATTCTGCTTAA TERM 3547 2962791 - 2962811 + T 80 -9 -3.60584 | opp_overlap 2962791, overlap 2962789 CATTTTTTCATTATA CCGGGGAT TATCT ATCCTCGG TGTTTAATTCTGCTT TERM 3548 2962952 - 2962977 + T 91 -9.8 -4.3295 | opp_overlap 2962957, overlap 2962954 TTACTTCTCATGTCA TACCAGGGAT ATTTAA ATCCCTGGTG TTTGGTTTTATTACA TERM 3549 2962954 - 2962975 + T 89 -10.2 -3.7519 | opp_overlap 2962957, overlap 2962952 ACTTCTCATGTCATA CCAGGGAT ATTTAA ATCCCTGG TGTTTGGTTTTATTA TERM 3550 2963049 - 2963018 - T 80 -5.2 -5.29846 | AATGCGAAACAAAAA CACCATAAAATTCA GCTT TGAATAATACGGTG TTGAAAAAATCTATT bla 2964084 - 2963152 - | Bla CKL_2903 2964684 - 2965067 + | transposase TERM 3551 2965325 - 2965361 + F 100 -10.5 -5.28778 | opp_overlap 2965328 2965350, overlap 2965358 TATTTATTTTCATAT TAACTTAACAGATTCAT TTA ATCAATTTGTTAAGTTA TTTTTTATAACTACT CKL_2905 2966564 - 2967217 + | metal ABC transporter, ATPase component TERM 3552 2967282 - 2967270 - g 70 -6.3 -4.18018 | opp_overlap 2967263 2967269 CGCTTTTATGCAAAA TGCAA TTA TTGCA GGTATATTTATATCC CKL_2906 2967244 - 2968038 + | metal ABC transporter, permease component CKL_2907 2968400 - 2968107 - | hypothetical protein cobT 2969704 - 2968622 - | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase sirC 2970541 - 2969915 - | precorrin-2 dehydrogenase TERM 3553 2970310 - 2970325 + g 82 -4.8 -5.33405 | TATGCTTATCTGCTA TATGAT GCAC ATCATA TTTTTCTTTAATCAA cobD2 2971567 - 2970590 - | cobalamin biosynthesis protein CKL_2911 2972160 - 2971606 - | hydrolase CKL_2912 2973608 - 2972160 - | transcription regulator TERM 3554 2973699 - 2973655 - R 90 -8.4 -4.64952 | gap 1, opp_overlap 2973655 2973659, overlap 2973659 AATTACATAAATAAA TAAAGAATAATACCTGTTTAA ATGT TTAAA-AGATATTATTCTCTA TTCTATGAGGTGGTT TERM 3555 2973695 - 2973659 - R 85 -7 -4.84602 | gap 1, opp_overlap 2973659 2973655, overlap 2973655 ACATAAATAAATAAA GAATAATACCTGTTTAA ATGT TTAAA-AGATATTATTC TCTATTCTATGAGGT CKL_2913 2974588 - 2973773 - | lipoprotein TERM 3556 2974647 - 2974630 - H 100 -11.3 -5.3167 | TAAAAACAAATAAAA CTCGAGG ATAA CCTCGAG CTAAAAACCTCAAAC ddl 2974962 - 2975855 + | D-alanine--D-alanine ligase TERM 3557 2975872 - 2975895 + T 75 -9.6 -2.54387 | AAAATTTTTTCATCA GGGGAATACA ATGG TGTTTTCCCC TGGATTACCACTTTA CKL_2915 2978398 - 2975900 - | hypothetical protein TERM 3558 2977540 - 2977550 + g 71 -5.4 -4.65168 | overlap 2977537 CCTTTAATATTTTCT TTCC CAA GGAA TTTTTGAGGTATAGT TERM 3559 2978068 - 2978056 - G 73 -9.1 -2.87931 | opp_overlap 2978056 CTGATTCTGCATATA GGGGA ATT TCCCC TTCTCTATTATTCAT TERM 3560 2978056 - 2978068 + g 81 -9.1 -3.77437 | opp_overlap 2978056 CTGATTCTGCATATA GGGGA ATT TCCCC TTCTCTATTATTCAT aroH 2979573 - 2978545 - | phospho-2-dehydro-3-deoxyheptonate aldolase thiE2 2980372 - 2979761 - | ThiE2 thiM 2981172 - 2980363 - | hypothetical protein thiD 2982039 - 2981239 - | hypothetical protein TERM 3561 2982091 - 2982070 - R 88 -5.2 -5.69262 | TTATAAAAATAAAAA GTGTATGC AGAAAA ACATACAC TTAAAAAGCCTATAA TERM 3562 2982585 - 2982549 - R 95 -12.5 -3.53091 | opp_overlap 2982549 2982554, overlap 2982554 ACTGCCCCTGCCAAA GAAAAGTCAGTAGAATC AAC GGTTCTACTGACTTTTA ATTTTAATTTACTTA TERM 3563 2982549 - 2982585 + r 100 -14.7 -3.36148 | opp_overlap 2982549 2982554, overlap 2982554 ACTGCCCCTGCCAAA GAAAAGTCAGTAGAATC AAC GGTTCTACTGACTTTTA ATTTTAATTTACTTA TERM 3564 2982554 - 2982580 + r 100 -14.6 -4.74084 | opp_overlap 2982549 2982554, overlap 2982549 CCCTGCCAAAGAAAA GTCAGTAGAATC AAC GGTTCTACTGAC TTTTAATTTTAATTT TERM 3565 2982580 - 2982554 - R 100 -12.4 -4.86731 | opp_overlap 2982554 2982549, overlap 2982549 CCCTGCCAAAGAAAA GTCAGTAGAATC AAC GGTTCTACTGAC TTTTAATTTTAATTT TERM 3566 2982670 - 2982700 + r 83 -10 -3.19175 | opp_overlap 2982660 2982668 2982670 2982676, overlap 2982676 ATAAATTCTCAAATA GAAAAAGAATCA CTTAATT TGATTCTTTTTC TTCAATATATTGGGA TERM 3567 2982700 - 2982670 - R 85 -10 -3.40173 | opp_overlap 2982670 2982676, overlap 2982660 2982668 2982676 ATAAATTCTCAAATA GAAAAAGAATCA CTTAATT TGATTCTTTTTC TTCAATATATTGGGA TERM 3568 2982694 - 2982676 - R 70 -3.2 -5.19879 | opp_overlap 2982670 2982676, overlap 2982670 2982668 TCTCAAATAGAAAAA GAATCA CTTAATT TGATTC TTTTTCTTCAATATA CKL_2922 2983861 - 2982683 - | Phage integrase-related protein TERM 3569 2983162 - 2983174 + g 79 -2.7 -5.76237 | overlap 2983163 ATCCATAATTGCGTT TTACT GTA AGTAG TTTTTTATTTATGTC TERM 3570 2983931 - 2983888 - R 80 -5.6 -5.00895 | opp_overlap 2983891, overlap 2983889 2983891 2983920 2983921 CGTACTACATAAAAA TTATTATTTAAGCATGTTTA ATAA TAAACACACTTAAATAATTT AAAATATTCTAATCA TERM 3571 2983930 - 2983889 - R 80 -9.1 -3.59814 | opp_overlap 2983891, overlap 2983888 2983891 2983920 2983921 GTACTACATAAAAAT TATTATTTAAGCATGTTTA ATAA TAAACACACTTAAATAATT TAAAATATTCTAATC TERM 3572 2983928 - 2983891 - R 95 -11.7 -3.36564 | opp_overlap 2983891, overlap 2983889 2983888 2983920 2983921 ACTACATAAAAATTA TTATTTAAGCATGTTTA ATAA TAAACACACTTAAATAA TTTAAAATATTCTAA CKL_2923 2984143 - 2983940 - | hypothetical protein CKL_2924 2985770 - 2984352 - | hypothetical protein TERM 3573 2985932 - 2985975 + r 74 -2.6 -5.67063 | gap 1, opp_overlap 2985929 2985937 2985940 2985942, overlap 2985938 2985941 TAAACTATATAATTA TAAAATAATAGACAGATGCTA TAT TTGCATCTGTC-ATCGTTTAA TTTTTTTATAATAAA TERM 3574 2985967 - 2985940 - R 72 -6.4 -4.39226 | gap 1, opp_overlap 2985938 2985932 2985941, overlap 2985937 2985942 ATAATTATAAAATAA TAGACAGATGCTA TAT TTGCATCTGTC-A TCGTTTAATTTTTTT TERM 3575 2985941 - 2985967 + r 71 -8 -3.18023 | opp_overlap 2985940 2985937 2985942, overlap 2985938 2985932 TAATTATAAAATAAT AGACAGATGCTA TAT TTGCATCTGTCA TCGTTTAATTTTTTT TERM 3576 2985966 - 2985942 - R 93 -11.5 -3.78091 | opp_overlap 2985941 2985938 2985932, overlap 2985940 2985937 AATTATAAAATAATA GACAGATGCTA TAT TTGCATCTGTC ATCGTTTAATTTTTT CKL_2925 2987419 - 2985965 - | hypothetical protein TERM 3577 2986215 - 2986197 - G 82 -7.5 -4.47307 | opp_overlap 2986197 AAACTAATATCAAAA TTGGTTG TAATC CAACCAA TACTTAATTTAAGTA TERM 3578 2986216 - 2986230 + g 78 -5.8 -4.81644 | opp_overlap 2986216 TTGTAATCCAACCAA TACTTA ATT TAAGTA TTTTACTTTTATTTA TERM 3579 2986254 - 2986265 + g 71 -3 -5.24416 | opp_overlap 2986249 TTATTTAAATTCCCT TCTT TGAA AAGA TTTTTATTATACTTG TERM 3580 2987864 - 2987894 + r 100 -12.8 -4.4715 | opp_overlap 2987867, overlap 2987867 TTAGGGGGAAGGGAC AAATCGGAAAATCT TAT AGATTTTCCGATTC TTTTGTCCCTTCCCC TERM 3581 2987891 - 2987867 - R 100 -14.5 -3.97368 | opp_overlap 2987864 2987867 GGGGGAAGGGACAAA TCGGAAAATCT TAT AGATTTTCCGA TTCTTTTGTCCCTTC TERM 3582 2987867 - 2987891 + r 100 -14.5 -4.34789 | opp_overlap 2987867, overlap 2987864 GGGGGAAGGGACAAA TCGGAAAATCT TAT AGATTTTCCGA TTCTTTTGTCCCTTC TERM 3583 2987937 - 2987919 - R 100 -11.8 -5.40072 | opp_overlap 2987935 TTCCCCCTAAAAAAA GTAAAGGC TGC GCCTTTAC TTAACATTAAGTATT TERM 3584 2988417 - 2988391 - R 82 -5.3 -5.47431 | gap 1, opp_overlap 2988391 GTAATAGACAAAAAA TAAAGGACAGGA TTTC TCCT-CCCTTTA CTTAATCATATTCAT CKL_2926 2989147 - 2988419 - | hypothetical protein CKL_2927 2990106 - 2989507 - | hypothetical protein TERM 3585 2990027 - 2990048 + g 70 -4.5 -4.79223 | gap 1, overlap 2990044 TTTGATCTTTTATTT TTTGCTC-CA CAG TGAGGGCAAA TTTTTGCTGATCTAG TERM 3586 2990260 - 2990223 - H 74 -8.5 -3.32803 | opp_overlap 2990222, overlap 2990221 AGTATATTAAATATA TCATCTACTACCACTAA ATTA TAAGTGGAGGTAGATGA ATGAATTATATTGCT CKL_2928 2990261 - 2990590 + | transcriptional regulator CKL_2929 2990802 - 2990602 - | hypothetical protein TERM 3587 2990822 - 2990857 + r 74 -8.6 -3.29251 | gap 1, opp_overlap 2990830, overlap 2990820 2990826 AATTTAATTTTTATT TGAATTTAGGTAGGAAA CCA TTTTCTGCCTAAA-TCA TATTATAAATATTTA TERM 3588 2990826 - 2990854 + r 83 -10.5 -2.81313 | opp_overlap 2990830, overlap 2990822 2990820 TAATTTTTATTTGAA TTTAGGTAGGAAA CCA TTTTCTGCCTAAA TCATATTATAAATAT CKL_2930 2991701 - 2990850 - | hypothetical protein TERM 3589 2990921 - 2990937 + g 100 -9.5 -4.77759 | AGAGCTGTTTAATTT GAGATAC TTT GTATCTC TTTTTAATAAGTTCT CKL_2931 2992728 - 2991796 - | hypothetical protein TERM 3590 2992813 - 2992781 - R 84 -6.6 -5.00895 | gap 1 TTCATTAGATAAAAA TAGAAAGTACTG-AT ATTT ATACAATACTTTCTA CAAGTGCATAGGCTC CKL_2932 2993732 - 2992797 - | hypothetical protein CKL_2933 2993937 - 2995559 + | surface-layer protein TERM 3591 2996080 - 2996064 - g 75 -8.1 -3.68836 | overlap 2996061 AGACTTAGCTAATAA TGCTATT AAA AATAGCA AATATAATGAAGCCA CKL_2934 2995642 - 2996496 + | hypothetical protein CKL_2935 2996674 - 2997111 + | hypothetical protein CKL_2936 2997180 - 2997509 + | hypothetical protein CKL_2937 2997710 - 2998435 + | hypothetical protein TERM 3592 2999082 - 2999110 + G 72 -2.5 -5.40474 | opp_overlap 2999079, overlap 2999083 CAGGAAATATCATTT ACTTCTAATAAAT ATG ATGTATTAGGAGA TTTTTTTCAAAAAAT TERM 3593 3000072 - 3000056 - g 78 -2.3 -5.83211 | TATCAAAATAAAAAA TCAACTC GAT AAATTGA AAAAGAAAAAAGAAA CKL_2938 2998605 - 3000440 + | Type I methyltransferase subunit-related protein TERM 3594 3000764 - 3000778 + G 80 -7.2 -4.7254 | opp_overlap 3000763 TCTAGACTAAATAGT CACATA GGA TATGTG TTTTTAATGGAGGAT TERM 3595 3001085 - 3001066 - g 82 -2.8 -5.90981 | TGAGATTAAAAAAAA GAAACTGG AGTA CGAGTCTC TGCAAAATATAATAG TERM 3596 3001166 - 3001133 - g 80 -5.5 -5.23316 | overlap 3001134 3001136 TACGACATTAAAAAA CCATCTTTAGATGAA AACT TTCATATAAAGATAA AACCTATGCTAAGTA CKL_2939 3000437 - 3001867 + | Type I specificity subunit-related protein CKL_2940 3002086 - 3002301 + | hypothetical protein CKL_2941 3002298 - 3002777 + | hypothetical protein CKL_2942 3002781 - 3003032 + | hypothetical protein TERM 3597 3003242 - 3003264 + T 100 -9.2 -5.79595 | opp_overlap 3003241 3003242 CTGCCATAACAAAGC CTGTAGAATC AAT GGTTCTACGG TTTTTTATTTTGGGG CKL_2943 3004629 - 3003379 - | integrase-related protein TERM 3598 3004341 - 3004358 + g 74 -5.7 -4.7254 | opp_overlap 3004340 GTGTATATAATAATT CTTTATA TCGG TATAAAG TTTTTGGTGCGAGCT TERM 3599 3004692 - 3004652 - R 70 -5.8 -4.36914 | opp_overlap 3004643 3004647 3004652 3004655, overlap 3004654 3004655 CCCCTTTCTATAAAA TATTTGTAGGTACTG-TATA ATT TAAAGCAGTACCTAC-AATA AGTTTAATTTACTAA TERM 3600 3004690 - 3004655 - R 80 -10 -2.8733 | gap 1, opp_overlap 3004643 3004652 3004647 3004655, overlap 3004654 3004652 CTTTCTATAAAATAT TTGTAGGTACTG-TATA ATT TAAAGCAGTACCTACAA TAAGTTTAATTTACT TERM 3601 3004655 - 3004690 + r 78 -10 -2.74078 | gap 1, opp_overlap 3004655 3004654 3004652, overlap 3004643 3004652 3004647 CTTTCTATAAAATAT TTGTAGGTACTG-TATA ATT TAAAGCAGTACCTACAA TAAGTTTAATTTACT CKL_2944 3005263 - 3004685 - | hypothetical protein CKL_2945 3005783 - 3005295 - | transcriptional regulator CKL_2946 3005926 - 3006318 + | transcriptional regulator CKL_2947 3006311 - 3006541 + | hypothetical protein CKL_2948 3006567 - 3008873 + | hypothetical protein TERM 3602 3009016 - 3009002 - f 82 -4.4 -5.69068 | overlap 3009011 TAAAAATATAAAAAA TATATA TTA TATATA AAAATATAAAAATTT CKL_2949 3009323 - 3009772 + | hypothetical protein CKL_2950 3009881 - 3010102 + | hypothetical protein CKL_2951 3010026 - 3010361 + | hypothetical protein CKL_2952 3010380 - 3010715 + | hypothetical protein CKL_2953 3010708 - 3010860 + | hypothetical protein TERM 3603 3010915 - 3010864 - f 100 -9.8 -5.5454 | opp_overlap 3010864 3010866 3010868 TTAAATAAATAAAAA TATACTTATTGGGAAAGTATACTT ATAT AAGTACATTTATCCAATAAGTATA ATGTCAAGGGAGGAA TERM 3604 3010866 - 3010913 + F 78 -10.2 -2.62184 | opp_overlap 3010864, overlap 3010864 3010868 AAATAAATAAAAATA TACTTATTGGGAAAGTATACTT ATAT AAGTACATTTATCCAATAAGTA TAATGTCAAGGGAGG TERM 3605 3010868 - 3010911 + F 71 -8.4 -2.85351 | opp_overlap 3010864, overlap 3010864 3010866 ATAAATAAAAATATA CTTATTGGGAAAGTATACTT ATAT AAGTACATTTATCCAATAAG TATAATGTCAAGGGA CKL_2954 3010939 - 3011145 + | hypothetical protein CKL_2955 3011307 - 3011537 + | transcriptional regulator CKL_2956 3011643 - 3011954 + | hypothetical protein TERM 3606 3012061 - 3012118 + F 100 -10.8 -4.75518 | gap 1, opp_overlap 3012061 GGCATTAGAAATAAT GGCCGCAGGAAATATACTATGTACCTT TTATT AAGGTATGTGG-ATAAATCCTGTGGCC TTTTAGTTTTATGTA CKL_2957 3012147 - 3012347 + | hypothetical protein CKL_2958 3012353 - 3012874 + | hypothetical protein CKL_2959 3012993 - 3013346 + | hypothetical protein CKL_2960 3013358 - 3013603 + | hypothetical protein CKL_2961 3013662 - 3014942 + | hypothetical protein TERM 3607 3014954 - 3014989 + F 80 -10 -2.88861 | opp_overlap 3014950 3014958, overlap 3014958 CTAATATAAACTACT GAAATAGGGGTAAT CATAAAAA ATTACTCCTATTTC TATATAAGGGTGATA CKL_2962 3015008 - 3015715 + | RNA polymerase sigma factor-related protein TERM 3608 3016118 - 3016140 + T 95 -9.2 -5.01497 | opp_overlap 3016118 TTATATGAATGATAA GGTACTCATA TTA TGTGGGTACC TTTTTATGTAATACT CKL_2963 3018069 - 3016291 - | hypothetical protein TERM 3609 3018561 - 3018533 - R 71 -7.6 -3.53444 | TTATTGGGTTCTAAA TGGGTACTAT AAATATAAA ATAGTACCCA AAAGCAAACTCAAAT CKL_2964 3018947 - 3018810 - | hypothetical protein TERM 3610 3019114 - 3019097 - H 72 -7 -3.91072 | opp_overlap 3019096 TCAAATGGCTAGAAA GCTTGG TATAAG CCAAGC ATTAAGTAAGTTAGA TERM 3611 3019734 - 3019724 - H 77 -5.4 -5.01732 | opp_overlap 3019724 AATTGTGTGAAAAAA CAAG CAA CTTG TTTTCAACTTATTAG CKL_2965 3019841 - 3020008 + | hypothetical protein TERM 3612 3020076 - 3020053 - T 100 -10.4 -4.79756 | TATACAATTCAAAAA TCCCTTAGAT ATAT ACCTAAGGGA TATAGAATATTCACT CKL_2966 3020291 - 3020094 - | hypothetical protein CKL_2967 3020567 - 3021739 + | iron containing alcohol dehydrogenase TERM 3613 3022059 - 3022075 + F 71 -4.3 -4.99638 | overlap 3022060 CCTATTAATTTTTTA ACTGGCC TTT GGTCAGC TTTTTATGTGAATAT TERM 3614 3022060 - 3022074 + F 71 -7.8 -3.58698 | overlap 3022059 CTATTAATTTTTTAA CTGGCC TTT GGTCAG CTTTTTATGTGAATA TERM 3615 3022139 - 3022107 - f 83 -5 -5.65927 | gap 1, overlap 3022111 TATTTAAACAAAAAA TAAAGCCTACCAGAA AAAT CTCCAGTAGGC-TTA GAAATTATGCTGGTT TERM 3616 3022136 - 3022111 - f 93 -8.3 -5.26158 | overlap 3022107 TAAACAAAAAATAAA GCCTACCAGAA AAAT CTCCAGTAGGC TTAGAAATTATGCTG CKL_2968 3022463 - 3022762 + | hypothetical protein CKL_2969 3023051 - 3023437 + | hypothetical protein TERM 3617 3023446 - 3023426 - f 86 -6.2 -5.21709 | opp_overlap 3023426 TTGGAGATGAAAAAA GAAGGAAA TTAAT TCTCCTTC TCATTATCTTTCTTT CKL_2970 3023817 - 3024995 + | hypothetical protein TERM 3618 3025203 - 3025178 - T 77 -7.8 -4.11141 | overlap 3025176 TTCTATATAAAAACA TAGATATCTA AATTAA TAGATATCTA AAAATTTAATGGTAG CKL_2971 3025734 - 3025528 - | hypothetical protein CKL_2972 3026197 - 3026027 - | hypothetical protein TERM 3619 3026307 - 3026272 - R 84 -5.6 -5.28983 | TTTAAAATATAAAAA TAAGATAAGCGCCT GGATGAAT AGATGCTTATCTTA AAATACAAATATAGA CKL_2973 3026696 - 3026526 - | hypothetical protein TERM 3620 3026700 - 3026682 - G 80 -9 -3.62096 | opp_overlap 3026676, overlap 3026687 CTGTATCACGTGAAA GATAATGA TAC TCATTATC AATAACTCTATTAAA CKL_2974 3026847 - 3027509 + | hypothetical protein CKL_2975 3027542 - 3027802 + | hypothetical protein TERM 3621 3027817 - 3027854 + T 89 -6.5 -5.45652 | gap 1, opp_overlap 3027817 AGGCAATATATTAAT GGTAGCGT-TAAACCA AAATACC TGGTTTATATGCTGCC TTTTTTATTCAAAGT TERM 3622 3028238 - 3028210 - T 100 -13.4 -4.37711 | TGAGCAAAGGTAAAA GGAGTTTTGAAT TTCTC ATTCAAAACTCC CGCAACCCGCATAAA CKL_2977 3028663 - 3028385 - | hypothetical protein TERM 3623 3029429 - 3029410 - g 71 -2.9 -5.2422 | AAGGATATGAAAAAA TGACAAA ACCCAG TTTGCCA GTCATAACAATAAAC CKL_2978 3029010 - 3030182 + | iron containing alcohol dehydrogenase TERM 3624 3030338 - 3030324 - T 70 -5 -4.74215 | AGATCACTAATAAAA TGTCAC GGC ATGACA AAATATTCTTCTTTC TERM 3625 3030369 - 3030399 + T 95 -8.4 -5.09204 | opp_overlap 3030369 ATGTAATAATAAAAA TAAGCCTATTGAGA AAA TCCCAATAGACTTA TTTTTGTTGAAATAT TERM 3626 3030399 - 3030369 - T 100 -12.8 -5.30348 | opp_overlap 3030369 ATGTAATAATAAAAA TAAGCCTATTGAGA AAA TCCCAATAGACTTA TTTTTGTTGAAATAT CKL_2979 3030662 - 3030417 - | hypothetical protein CKL_2980 3031431 - 3030982 - | hypothetical protein CKL_2981 3033000 - 3031708 - | hypothetical protein TERM 3627 3032152 - 3032162 + g 70 -4 -4.9448 | TAACTGTAATTCTAG TCTT TTG AAGA TTTTCTTTACTGCAT TERM 3628 3032763 - 3032775 + g 72 -4.9 -4.7878 | overlap 3032768 TTAATTTTTGTTGTA TTTCT TTG AGAAA TTTATTTTCTCCATA CKL_2982 3033292 - 3033086 - | hypothetical protein TERM 3629 3033540 - 3033529 - R 86 -4.4 -5.83211 | CACCAAAATAAAAAA GCTA TCTC TAGC CCCTATTTTGCCTTG TERM 3630 3033718 - 3033699 - R 83 -5 -5.58454 | GTTATATTAAAAAAA GTCCTGGA TTTC TCCAAAAC TCTTATACTTAGCTC CKL_2983 3034300 - 3033740 - | hypothetical protein CKL_2984 3034833 - 3034441 - | hypothetical protein TERM 3631 3035040 - 3035018 - H 84 -9.3 -3.54424 | opp_overlap 3035014 3035021, overlap 3035021 TCTTACTTTCTTAAA TAACACATC AGGAA GATGTGTTA TAAACTTTTTGTACC TERM 3632 3035037 - 3035021 - H 70 -6.6 -3.9122 | opp_overlap 3035021 3035014, overlap 3035018 TACTTTCTTAAATAA CACATC AGGAA GATGTG TTATAAACTTTTTGT CKL_2985 3035243 - 3035647 + | hypothetical protein TERM 3633 3035755 - 3035737 - T 93 -8.2 -5.33331 | opp_overlap 3035736 3035739 TAAATATAACAAAAA GATCCTAC AAA GTAGAATC AATTAATTTGGGAGA CKL_2986 3036549 - 3036103 - | hypothetical protein CKL_2987 3037160 - 3036714 - | hypothetical protein CKL_2988 3037876 - 3037325 - | acetyltransferase CKL_2989 3038631 - 3038086 - | hypothetical protein CKL_2990 3038887 - 3039312 + | transcriptional regulator TERM 3634 3039316 - 3039371 + F 91 -10.4 -4.15061 | gap 1 AATCTTAAGTAGTTT TTTATCACTTTAATTATCATGATAAGT AAG AATTATTATGATAATTAAA-TGGTAAA TTTATATATAAATTA TERM 3635 3040031 - 3040043 + G 76 -6.3 -4.73864 | opp_overlap 3040031 3040030, overlap 3040026 CCCTATGGTTGAAAC TGACA TGC TGTCA TTTTCTGTTCCTTAC CKL_2991 3039414 - 3040160 + | hypothetical protein TERM 3636 3040310 - 3040292 - f 72 -5.9 -4.4715 | opp_overlap 3040292, overlap 3040287 TTTTAACTGATAAAA GCTCTGG GTTGA CCAGGGC TTTTTGGGGTTCTTT TERM 3637 3040292 - 3040310 + F 87 -8.1 -4.7153 | opp_overlap 3040292 3040287 TTTTAACTGATAAAA GCTCTGG GTTGA CCAGGGC TTTTTGGGGTTCTTT CKL_2992 3040603 - 3040815 + | hypothetical protein TERM 3638 3040863 - 3040886 + GT 71 -7.5 -3.54636 | overlap 3040861 TCTCAAATATTTACA GGTTTCACA GACAGA TGTGGAACC TAATTTTTTCTTCTT CKL_2993 3040769 - 3040996 + | hypothetical protein CKL_2994 3041640 - 3040993 - | hypothetical protein TERM 3639 3042150 - 3042189 + G 81 -10.2 -3.03243 | TATTTAAGTGGTGTA GTATTTCTAGTACCAATA GCAT TAATGGAACTAGGAATAC TATTCAAAACTAAAT CKL_2995 3041847 - 3042332 + | hypothetical protein TERM 3640 3042359 - 3042413 + T 100 -19 -2.59431 | opp_overlap 3042359 3042367, overlap 3042367 3042377 3042380 TTTAATATCAAGTGA TTCTAAGATTCAGATGGAGTTTTCCT ATA AGGAATACTTTCTCTGAATCTTAGAA TCGCTTATCCAAAGG TERM 3641 3042413 - 3042359 - T 100 -14.6 -2.60512 | opp_overlap 3042359 3042367 3042377 3042380, overlap 3042367 TTTAATATCAAGTGA TTCTAAGATTCAGATGGAGTTTTCCT ATA AGGAATACTTTCTCTGAATCTTAGAA TCGCTTATCCAAAGG TERM 3642 3042367 - 3042405 + T 76 -9 -3.06969 | opp_overlap 3042359 3042367, overlap 3042359 3042377 3042380 CAAGTGATTCTAAGA TTCAGATGGAGTTTTCCT ATA AGGAATACTTTCTCTGAA TCTTAGAATCGCTTA porB 3043712 - 3042780 - | hypothetical protein TERM 3643 3043093 - 3043103 + g 71 -8.2 -3.24089 | overlap 3043092 CCCTTTTTGTATATT GCCC TAT GGGC CTTTTCATGTATATC porA 3044907 - 3043726 - | hypothetical protein porD 3045218 - 3044919 - | hypothetical protein porC 3045793 - 3045218 - | PorC TERM 3644 3045826 - 3045884 + r 100 -16.4 -3.09516 | opp_overlap 3045831 3045873, overlap 3045848 TTTATAATATAATTA AAAAATCTCCCGTCCTTATAAATATAAT TTT ATTATATTTATAAGGACGGGAGATACGC TTCCGTGGTACCACC TERM 3645 3045879 - 3045831 - R 100 -29.5 -5.3671 | opp_overlap 3045826 3045848, overlap 3045873 AATATAATTAAAAAA TCTCCCGTCCTTATAAATATAAT TTT ATTATATTTATAAGGACGGGAGA TACGCTTCCGTGGTA CKL_3000 3047475 - 3046303 - | iron containing alcohol dehydrogenase CKL_3001 3048603 - 3047698 - | glycyl radical activating protein TERM 3646 3048333 - 3048354 + g 85 -6.7 -4.98255 | gap 1, overlap 3048329 TTGTACATACCTCTG TGCAAAGTCC ACA GGA-TTTGCA TTTTTCTCGTTCAAG CKL_3002 3051048 - 3048679 - | glycyl radical activating protein TERM 3647 3049216 - 3049190 - G 73 -7.5 -3.61398 | gap 1, opp_overlap 3049194 CCCTCTTTGTAATAA TGAT-TTGCCAT CTTG ATGGCAATATCA TCTACATAGTCTATA TERM 3648 3049194 - 3049211 + g 71 -8.5 -2.86728 | opp_overlap 3049190 CTTTGTAATAATGAT TTGCCAT CTTG ATGGCAA TATCATCTACATAGT TERM 3649 3049357 - 3049347 - G 71 -5.4 -4.59773 | CTTTATCTTCAAAAA CAAG TTT CTTG ATTACTGCAAGAGAG TERM 3650 3049502 - 3049489 - G 71 -3.1 -5.13344 | opp_overlap 3049489 3049496 ACAGGAAGATAAAAA TGGTC TTGG AACCA TTTCCTTATGAAGTT TERM 3651 3050686 - 3050700 + g 70 -7.2 -3.72236 | TTCTAAAGATTTTCC TTTCCA ATA TGGAAA TATATTTTTTCTCAC CKL_3003 3051712 - 3051164 - | hypothetical protein CKL_3004 3053123 - 3051810 - | sensory transduction histidine kinase TERM 3652 3052225 - 3052211 - G 72 -8.6 -3.04715 | overlap 3052210 TATCTTTTTCAAAAG CAATGG CTT CCATTG ACAGCACTACATTGT CKL_3005 3053811 - 3053125 - | transcriptional regulator TERM 3653 3053905 - 3053854 - R 100 -12.6 -2.7439 | gap 1, opp_overlap 3053860 3053867 3053870, overlap 3053856 3053867 3053870 AGCTACTAGAAACAG GATGC-ATTCAAAACAAGGAGCTGC TAT GAAGCTCCTTATTTTGAATTACTTC ATAATGGTGTTTTTA TERM 3654 3053903 - 3053856 - R 77 -9.4 -2.91255 | gap 1, opp_overlap 3053860 3053867 3053870, overlap 3053854 3053867 3053870 CTACTAGAAACAGGA TGC-ATTCAAAACAAGGAGCTGC TAT GAAGCTCCTTATTTTGAATTACT TCATAATGGTGTTTT TERM 3655 3053860 - 3053898 + r 100 -14.8 -3.41961 | opp_overlap 3053856 3053854 3053867 3053870, overlap 3053867 3053870 TAGAAACAGGATGCA TTCAAAACAAGGAGCTGC TAT GAAGCTCCTTATTTTGAA TTACTTCATAATGGT TERM 3656 3053891 - 3053867 - R 88 -9.3 -4.20084 | opp_overlap 3053860 3053867 3053870, overlap 3053856 3053854 3053870 AGGATGCATTCAAAA CAAGGAGCTGC TAT GAAGCTCCTTA TTTTGAATTACTTCA TERM 3657 3053867 - 3053891 + r 76 -7.1 -4.32201 | opp_overlap 3053867 3053856 3053854 3053870, overlap 3053860 3053870 AGGATGCATTCAAAA CAAGGAGCTGC TAT GAAGCTCCTTA TTTTGAATTACTTCA TERM 3658 3053888 - 3053870 - R 81 -8.8 -4.22214 | opp_overlap 3053867 3053860 3053870, overlap 3053867 3053856 3053854 ATGCATTCAAAACAA GGAGCTGC TAT GAAGCTCC TTATTTTGAATTACT TERM 3659 3053870 - 3053888 + r 83 -8.8 -4.26461 | opp_overlap 3053870 3053867 3053856 3053854, overlap 3053867 3053860 ATGCATTCAAAACAA GGAGCTGC TAT GAAGCTCC TTATTTTGAATTACT CKL_3006 3054399 - 3053965 - | hypothetical protein CKL_3007 3054744 - 3056024 + | methyl-accepting transducer CKL_3008 3056121 - 3056309 + | hypothetical protein CKL_3009 3056443 - 3057018 + | dehydrogenase TERM 3660 3057201 - 3057191 - g 71 -5.4 -4.60258 | TGACTAAAGAAGAAA TTGC TCT GCAA TTGGCCGTAGCAGCC CKL_3010 3057175 - 3057357 + | hypothetical protein TERM 3661 3057364 - 3057397 + F 74 -4.1 -5.24129 | gap 1 GTCAAATAAAACAAA GTACCTAAGATTTA TATAAAT TAAATCT-GGGTAC TTTTTTATAGACAAA CKL_3011 3057508 - 3058239 + | ABC transporter ATPase CKL_3012 3058232 - 3059401 + | ABC transporter permease sigL 3060798 - 3059437 - | RNA polymerase factor sigma-54 TERM 3662 3060841 - 3060869 + r 91 -9.8 -4.39828 | opp_overlap 3060840 3060841 AAGATTATTATCAAG TGATTCTTATGT TCATC GCATAAGAATCA TTTTCTACCACTATT TERM 3663 3060869 - 3060841 - R 73 -9.1 -2.54459 | opp_overlap 3060841, overlap 3060840 AAGATTATTATCAAG TGATTCTTATG TTCATCG CATAAGAATCA TTTTCTACCACTATT TERM 3664 3061034 - 3061005 - R 100 -10.9 -5.38047 | gap 1, opp_overlap 3061007 3061030 TATTTAGATAAAAAA GAGGACATTTCACA ATA TG-GAAATGCCCTC TTAAGATGGGATATT 4hbD 3062185 - 3061070 - | hypothetical protein sucD 3063583 - 3062222 - | hypothetical protein TERM 3665 3062646 - 3062659 + g 74 -6.7 -4.30576 | overlap 3062632 AGTACTATAACCTTA GTACC TTCT GGTAC TTTTACTCCTGCAAG cat1 3065261 - 3063645 - | Cat1 TERM 3666 3064572 - 3064587 + g 71 -3.2 -5.25893 | AACTATAGGTATGGG CTCTCT TCTT GGAGGG TTTTTTAATGTATAT orfY 3066250 - 3065315 - | OrfY TERM 3667 3066377 - 3066329 - R 83 -10 -3.2653 | opp_overlap 3066328 3066324, overlap 3066324 TTAACTACAATTGAA TTCTTATTTTTAGTTACACCTT CATAT AAAGTGTAACTAAAAATCATAA ATAAATTCTAAAATC cat2 3067674 - 3066385 - | Cat2 CKL_3019 3068298 - 3067975 - | hypothetical protein TERM 3668 3068277 - 3068308 + g 89 -12.5 -2.66991 | opp_overlap 3068266 3068286, overlap 3068280 3068286 ACAGCACCTCATCTC TAGGGAAAAGGTG AGAAAA CACCTTTTCCTTA ATCTTCTATTCTAGC TERM 3669 3068280 - 3068305 + g 91 -12 -3.47232 | opp_overlap 3068266 3068286, overlap 3068277 3068286 GCACCTCATCTCTAG GGAAAAGGTG AGAAAA CACCTTTTCC TTAATCTTCTATTCT abfD 3069760 - 3068306 - | AbfD TERM 3670 3069994 - 3069969 - R 100 -9.9 -4.6759 | opp_overlap 3069942 3069968 3069969 3069972 AATATTGCAATAAAA GAACTCTTATA TTCA TATAAGAGTCC CTTTACCTGTTTATA CKL_3021 3071492 - 3070050 - | transcriptional regulator TERM 3671 3070930 - 3070946 + g 75 -5.1 -5.07107 | opp_overlap 3070927 3070930, overlap 3070940 AGTAAAAGTACAGTA GTATCCA CTT TGGCTAC TTTTTTAGCCATTTC TERM 3672 3071576 - 3071557 - R 95 -7.2 -5.40464 | opp_overlap 3071557 TACTATAAATAAAAA GAGAATTC ACCA GAATCCTC TTCTCCCACTTTAAC CKL_3022 3072195 - 3071776 - | acyl dehydratase CKL_3023 3072461 - 3072237 - | hypothetical protein CKL_3024 3073812 - 3072523 - | Acyl-CoA reductase-related protein CKL_3025 3074933 - 3073809 - | Acyl-protein synthetase-related protein fadD 3076420 - 3074951 - | FadD TERM 3673 3075401 - 3075425 + g 82 -8.6 -4.08872 | overlap 3075420 TCTTGCAGCTATTTC TCCCACCTCT CCCAC AGAGGTAGGA TTTCCTTCTCTATTT TERM 3674 3075860 - 3075846 - G 93 -8.6 -4.89233 | TAGCAATAGTAAAAA GGAAGT ACC ACTTCC ACTCTGTCATTTTTA TERM 3675 3076254 - 3076243 - G 91 -4.4 -5.93809 | TTTTTATAAAAAAAA CAGA ATTG TCTG AAATAACAAGTACAC acp2 3076659 - 3076417 - | Acp2 CKL_3028 3076843 - 3076643 - | hypothetical protein CKL_3029 3076981 - 3077634 + | hypothetical protein TERM 3676 3077673 - 3077702 + T 100 -12.4 -4.29304 | opp_overlap 3077676 3077678 CGAATCCCTTTTAGT TAAGAGGTTAGA AATTAA TCTAACCTCTTA TTTGTATTGTAATAA TERM 3677 3077699 - 3077676 - T 78 -9.7 -3.05463 | opp_overlap 3077673, overlap 3077678 ATCCCTTTTAGTTAA GAGGTTAGA AATTAA TCTAACCTC TTATTTGTATTGTAA CKL_3030 3078718 - 3077687 - | hypothetical protein TERM 3678 3078803 - 3078813 + r 71 -2.6 -5.52023 | overlap 3078810 TGGCAATAATATTAT TTTA ATG TAAA TTTTTTATTAATGAT CKL_3031 3079105 - 3078917 - | hypothetical protein TERM 3679 3079268 - 3079238 - H 74 -9.2 -2.89212 | overlap 3079237 3079240 ATTATTGATAATAAG TACCTGCTATTATA AAA TATAATAGCGAGTA TAAAAAATTCATAAC CKL_3032 3079299 - 3079805 + | hypothetical protein TERM 3680 3080448 - 3080466 + G 88 -6.2 -5.37345 | opp_overlap 3080441 3080448 3080451 AGACAAAATTTATAA TAATATAA AGA TTATATTA TTTTTTGTGATTGCC TERM 3681 3080878 - 3080889 + G 83 -5.8 -5.24129 | overlap 3080867 CTCTGGGCTGTTACA GCAG CCAT CTGC TTTTTTATAAAACCC CKL_3033 3079798 - 3081201 + | hypothetical protein TERM 3682 3081217 - 3081180 - T 75 -5.7 -4.68528 | overlap 3081182 AAATTTAAAAAATAA TCTTTCAAGGGGAATTT TTTA AAATTGCCCTTGCAACA GATACACGCTGTTCC TERM 3683 3081449 - 3081472 + T 70 -8.2 -3.04792 | gap 1 TGTAGCAGTGCTTAT CCCCCA-CTTT GAA GAAGATGGGGG TATTAGCAATGGTAG TERM 3684 3081737 - 3081715 - T 72 -7 -4.0616 | opp_overlap 3081715 TATGGTAATCATAAA GCATCTGCCA TTA CAGCAAATGC TTTCTTTGTGAATAG CKL_3034 3082804 - 3081797 - | hypothetical protein TERM 3685 3082921 - 3082908 - H 77 -2.3 -5.84381 | opp_overlap 3082909, overlap 3082909 TTATCAATAAAAAAA TGCAC AGCA GTGCT TACTTCCTATTTTGA CKL_3035 3083043 - 3083384 + | hypothetical protein TERM 3686 3083476 - 3083440 - f 100 -14 -3.78034 | opp_overlap 3083438 3083437 3083440 3083445, overlap 3083446 CACGCATAGGAATAA GATAAAGGCTATTAGA GGATA TCCAATAGCCCTTATC TATATTATCTAAGTT TERM 3687 3083440 - 3083476 + F 79 -9.6 -3.23734 | opp_overlap 3083440 3083446, overlap 3083438 3083437 3083445 CACGCATAGGAATAA GATAAAGGCTATTAGA GGATA TCCAATAGCCCTTATC TATATTATCTAAGTT TERM 3688 3083470 - 3083446 - f 88 -9.4 -4.3587 | opp_overlap 3083445 3083440 3083438 3083437, overlap 3083440 TAGGAATAAGATAAA GGCTATTAGA GGATA TCCAATAGCC CTTATCTATATTATC TERM 3689 3083846 - 3083882 + F 91 -10.5 -4.03234 | opp_overlap 3083857 CACACCTCATTACTT TATCGTATATATTAAGT GAA GCTTAATATATATGGTA TTTATATGAAAAACA CKL_3036 3084183 - 3084569 + | hypothetical protein CKL_3037 3084611 - 3084913 + | hypothetical protein CKL_3038 3085002 - 3085595 + | hypothetical protein CKL_3039 3086068 - 3086583 + | transcriptional regulator CKL_3040 3086657 - 3087796 + | permease CKL_3041 3090302 - 3087906 - | permease TERM 3690 3088016 - 3087995 - G 85 -8.1 -4.68645 | TAGGCAAAAGCAAAA TTATCAGGG CATA CCCTAATAA GTACCAGACTGGAAC CKL_3042 3090983 - 3090306 - | ABC transporter ATPase CKL_3043 3092107 - 3091079 - | sensory transduction histidine kinase CKL_3044 3092786 - 3092097 - | transcriptional regulator CKL_3045 3094221 - 3092809 - | sensory transduction histidine kinase CKL_3046 3094967 - 3094248 - | transcriptional regulator CKL_3047 3095128 - 3096039 + | transporter CKL_3048 3096036 - 3096797 + | transporter CKL_3049 3096798 - 3097541 + | ABC transporter permease gdh 3097632 - 3098963 + | glutamate dehydrogenase TERM 3691 3098966 - 3099007 + F 73 -9 -2.67792 | opp_overlap 3098972, overlap 3098960 3098972 3098975 GGGAATAGTTTAATT TTAAAAGCAGCTATTACT ACTTGC AGTAATAGCTACTTTTCA TAAATTACTTTTATT TERM 3692 3098972 - 3099001 + F 81 -8 -4.31379 | opp_overlap 3098972, overlap 3098966 3098960 3098975 AGTTTAATTTTAAAA GCAGCTATTACT ACTTGC AGTAATAGCTAC TTTTCATAAATTACT TERM 3693 3099001 - 3098972 - f 95 -10.9 -4.19506 | opp_overlap 3098972 3098966 3098960 3098975 AGTTTAATTTTAAAA GCAGCTATTACTA CTTG CAGTAATAGCTAC TTTTCATAAATTACT TERM 3694 3098975 - 3098998 + F 71 -8.3 -3.1462 | opp_overlap 3098972, overlap 3098972 3098966 3098960 TTAATTTTAAAAGCA GCTATTACT ACTTGC AGTAATAGC TACTTTTCATAAATT TERM 3695 3099103 - 3099140 + F 100 -12.5 -5.02074 | gap 1, opp_overlap 3099099 3099107 3099109, overlap 3099107 TTTTTTATTAAGTAT TATATATTTAGATGCAAA CCA TTTGCATCTAAATAT-TA TTTTTTAAGGAGTGA TERM 3696 3099107 - 3099137 + F 100 -15.8 -4.61482 | opp_overlap 3099099 3099107 3099109, overlap 3099103 TTATTAAGTATTATA TATTTAGATGCAAA CCA TTTGCATCTAAATA TTATTTTTTAAGGAG TERM 3697 3099137 - 3099107 - f 100 -15.8 -2.87136 | opp_overlap 3099107 3099103, overlap 3099099 3099109 TTATTAAGTATTATA TATTTAGATGCAAA CCA TTTGCATCTAAATA TTATTTTTTAAGGAG TERM 3698 3099135 - 3099109 - f 100 -14 -2.98282 | opp_overlap 3099107 3099103, overlap 3099107 3099099 ATTAAGTATTATATA TTTAGATGCAAA CCA TTTGCATCTAAA TATTATTTTTTAAGG TERM 3699 3099886 - 3099853 - g 74 -6.1 -4.43221 | overlap 3099857 AAACAGTGTAGAAAA TGTATTTGCAGAAGG AGAA CCTTCTACAAAAAAA TTGAAAGAACTGGTA TERM 3700 3099882 - 3099857 - g 86 -11.3 -2.80345 | overlap 3099853 AGTGTAGAAAATGTA TTTGCAGAAGG AGAA CCTTCTACAAA AAAATTGAAAGAACT CKL_3051 3099164 - 3100096 + | metal binding protein CKL_3052 3100221 - 3101366 + | hypothetical protein TERM 3701 3101382 - 3101407 + F 100 -13.5 -3.45366 | opp_overlap 3101386, overlap 3101386 AATAAAAGTTCTTCT TAAATCCTCCT TCTA AGGAGGATTTA TTCGTTCATTCAAAA TERM 3702 3101386 - 3101403 + F 91 -9.9 -4.36343 | opp_overlap 3101386, overlap 3101382 AAAGTTCTTCTTAAA TCCTCCT TCTA AGGAGGA TTTATTCGTTCATTC TERM 3703 3101403 - 3101386 - f 86 -9.9 -3.5394 | opp_overlap 3101386 3101382 AAAGTTCTTCTTAAA TCCTCCT TCTA AGGAGGA TTTATTCGTTCATTC TERM 3704 3103019 - 3102999 - g 74 -5.5 -4.84914 | overlap 3103002 3103010 AGTCACATAATAAAA TATTTGACA CAT TGTCAACTA CAAAAGAAAATCTTT CKL_3053 3101564 - 3103633 + | methyl-accepting chemotaxis protein TERM 3705 3103643 - 3103680 + T 76 -8.8 -3.60661 | gap 2, opp_overlap 3103653, overlap 3103643 3103645 3103646 3103653 TCTTAATACTATATT GAT-G-GCAAAATGCTTA AATA TAAGCATTTTGCCCTATC TTATATAGTTAAATG TERM 3706 3103643 - 3103678 + T 88 -10.6 -3.376 | opp_overlap 3103653, overlap 3103643 3103645 3103646 3103653 TCTTAATACTATATT GATGGCAAAATGCTTA AATA TAAGCATTTTGCCCTA TCTTATATAGTTAAA TERM 3707 3103645 - 3103676 + T 100 -13.2 -3.25147 | opp_overlap 3103653, overlap 3103643 3103643 3103646 3103653 TTAATACTATATTGA TGGCAAAATGCTTA AATA TAAGCATTTTGCCC TATCTTATATAGTTA TERM 3708 3103646 - 3103675 + T 100 -16.7 -2.54365 | opp_overlap 3103653, overlap 3103645 3103643 3103643 3103653 TAATACTATATTGAT GGCAAAATGCTTA AATA TAAGCATTTTGCC CTATCTTATATAGTT TERM 3709 3103653 - 3103668 + T 70 -6.2 -4.19472 | opp_overlap 3103653, overlap 3103646 3103645 3103643 3103643 ATATTGATGGCAAAA TGCTTA AATA TAAGCA TTTTGCCCTATCTTA TERM 3710 3103668 - 3103653 - T 70 -6.2 -4.15006 | opp_overlap 3103653 3103646 3103645 3103643 3103643 ATATTGATGGCAAAA TGCTTA AATA TAAGCA TTTTGCCCTATCTTA CKL_3054 3104004 - 3103681 - | transport protein TERM 3711 3104049 - 3104076 + H 100 -13 -4.34402 | opp_overlap 3104049 TAAATAATTAAAAAA GCTATTTTTCTT ATTT AAGAAAAATAGC TTTTAATATCCCAAA TERM 3712 3104076 - 3104049 - H 100 -13 -5.4148 | opp_overlap 3104049 TAAATAATTAAAAAA GCTATTTTTCTT ATTT AAGAAAAATAGC TTTTAATATCCCAAA TERM 3713 3104586 - 3104535 - H 88 -7.59999 -4.91511 | opp_overlap 3104541, overlap 3104537 3104547 AGTTGACCAGAAAAA CTGGAAGCTAAATTTTAATCTTAC ATTT GTAAGATTAAAATTTAGCTTTTTT TAATTAATACATTGT TERM 3714 3104584 - 3104537 - H 100 -14.6 -2.72028 | opp_overlap 3104541, overlap 3104535 3104547 TTGACCAGAAAAACT GGAAGCTAAATTTTAATCTTAC ATTT GTAAGATTAAAATTTAGCTTTT TTTAATTAATACATT TERM 3715 3104541 - 3104580 + H 100 -19.8 -5.65513 | opp_overlap 3104537 3104535 3104547 CCAGAAAAACTGGAA GCTAAATTTTAATCTTAC ATTT GTAAGATTAAAATTTAGC TTTTTTTAATTAATA TERM 3716 3104574 - 3104547 - H 93 -11.6 -3.77241 | opp_overlap 3104541, overlap 3104537 3104535 AAACTGGAAGCTAAA TTTTAATCTTAC ATTT GTAAGATTAAAA TTTAGCTTTTTTTAA TERM 3717 3104617 - 3104642 + H 81 -8.5 -4.18702 | opp_overlap 3104617, overlap 3104605 GATTATTTTTTAAAA TACTTTTTTCA AAAA TGAAGAAAGTA TTTATTAAAAATTAT TERM 3718 3104642 - 3104617 - H 70 -6.3 -4.10161 | opp_overlap 3104605 3104617 GATTATTTTTTAAAA TACTTTTTTCA AAAA TGAAGAAAGTA TTTATTAAAAATTAT TERM 3719 3105683 - 3105672 - g 83 -4.4 -5.62552 | opp_overlap 3105672 AAAAAAATCAAAAAA GGTA GACA TACC ATTATAAATAAACCT CKL_3055 3104823 - 3106031 + | transcriptional regulator TERM 3720 3106489 - 3106466 - g 82 -2.4 -6.07374 | ATAAAAAATAAAAAA CTCTACGAAA AGTA TTTAGAAGAG AAATACCCTAATAAG CKL_3056 3106274 - 3107371 + | ABC transporter solute-binding protein CKL_3057 3107387 - 3108169 + | ABC transporter permease CKL_3058 3108185 - 3108958 + | ABC transporter ATP-binding protein TERM 3721 3109577 - 3109551 - g 93 -8 -5.12971 | overlap 3109571 AATATCTAATAAAAA CCCCTACAGTAA TTA TTACAGCAGGAG CAGCCGGTAAATTCG CKL_3059 3108980 - 3110830 + | oxidoreductase CKL_3060 3110823 - 3111050 + | ferredoxin CKL_3061 3111154 - 3111771 + | hypothetical protein TERM 3722 3111894 - 3111862 - T 100 -9.3 -4.93296 | TCATCAGGAGAAAAA GGAAAACAGATCAAA CTA TCTACTCTGTTTTCC AGCTTTATTTAATTT trpB2 3113305 - 3111923 - | tryptophan synthase subunit beta TERM 3723 3113247 - 3113262 + g 74 -7.6 -3.81951 | opp_overlap 3113247 3113249 TCAGCCCTAAGATTA TACCAC TTAC GTGGTA TTTCCTCCTCTGACA TERM 3724 3113382 - 3113353 - R 100 -16.6 -5.57729 | overlap 3113376 3113379 AAAGAATATAAAAAA GCTCTTGTCCCT AGTAAA AGGGACAAGAGC TCATACTCCTGCGAT CKL_3063 3113954 - 3113700 - | hypothetical protein TERM 3725 3114151 - 3114103 - R 72 -6.3 -4.371 | opp_overlap 3114109, overlap 3114109 3114147 TTTAGCATATTAAAA TAAAAATTACTATAGGAGCATAC AAA ATATTATCCCATAGTAATTTTAA AATAAAGATATCCTA TERM 3726 3114145 - 3114109 - R 82 -5.3 -5.52079 | opp_overlap 3114109, overlap 3114103 ATATTAAAATAAAAA TTACTATAGGAGCATAC AAA ATATTATCCCATAGTAA TTTTAAAATAAAGAT CKL_3064 3114837 - 3114181 - | RNA polymerase sigma factor rpoD-related protein TERM 3727 3115114 - 3115089 - R 82 -9.1 -3.85698 | opp_overlap 3115089 TTTCTCTTTTAGAAA GATGGATCTAC ATAA GTAAATCCACC TTATATCTAGTTCAC CKL_3065 3115412 - 3115194 - | hypothetical protein CKL_3066 3115753 - 3115529 - | hypothetical protein CKL_3067 3116794 - 3115859 - | hypothetical protein TERM 3728 3116855 - 3116815 - R 100 -13.7 -4.56775 | opp_overlap 3116815, overlap 3116821 ACCTTCTCCTAAAAA TTAAAAGTTATCCTGAAAT AAA ATTTCAAGATAACCTCTAA TTAATTTTATTTTTT TERM 3729 3116815 - 3116855 + r 72 -7.1 -3.989 | opp_overlap 3116815 3116821 ACCTTCTCCTAAAAA TTAAAAGTTATCCTGAAAT AAA ATTTCAAGATAACCTCTAA TTAATTTTATTTTTT TERM 3730 3116849 - 3116821 - R 100 -12.7 -4.77757 | opp_overlap 3116815, overlap 3116815 TCCTAAAAATTAAAA GTTATCCTGAAAT AAA ATTTCAAGATAAC CTCTAATTAATTTTA CKL_3068 3117746 - 3116862 - | hypothetical protein CKL_3069 3118021 - 3119775 + | hypothetical protein TERM 3731 3119820 - 3119838 + T 74 -9 -2.78384 | opp_overlap 3119819, overlap 3119822 TGCACAATTAAGGAG GATTTTTC TTA GAAAAATC TATAATAAAGAAAAG TERM 3732 3119899 - 3119841 - T 89 -11.5 -2.88667 | opp_overlap 3119844 3119848, overlap 3119844 3119848 3119857 TCTTAGAAAAATCTA TAATAAAGAAAAGATACCTAGATTT AAATTATAA AAATCTAGGAGTCTCTTCTTTATTA ACTTCTATAATCTAG TERM 3733 3119844 - 3119896 + T 74 -8.8 -3.27164 | opp_overlap 3119841 3119844 3119848 3119857, overlap 3119848 TAGAAAAATCTATAA TAAAGAAAAGATACCTAGATTT AAATTATAA AAATCTAGGAGTCTCTTCTTTA TTAACTTCTATAATC TERM 3734 3119896 - 3119844 - T 76 -8.8 -3.57767 | opp_overlap 3119844 3119848, overlap 3119841 3119848 3119857 TAGAAAAATCTATAA TAAAGAAAAGATACCTAGATTT AAATTATAA AAATCTAGGAGTCTCTTCTTTA TTAACTTCTATAATC CKL_3070 3120474 - 3120046 - | hypothetical protein TERM 3735 3120554 - 3120536 - R 86 -9 -4.15657 | opp_overlap 3120517, overlap 3120532 TCACAATTAGAGAAA GATTTTTC TGT GAAAAATC TACAATAAATTGTGA TERM 3736 3120741 - 3120713 - R 90 -11.1 -3.21938 | opp_overlap 3120704, overlap 3120706 TTAAAAGTTGAGGAA GACTTTTCTCAGC TTT GCTGCGAAAAATC TCAAAATATAGCAAC TERM 3737 3120795 - 3120748 - R 88 -9.4 -4.31329 | gap 1, opp_overlap 3120754 3120756, overlap 3120750 3120756 CGAAAAATCTCAAAA TATAGCAACAGCACCACTAAAGC CTT GCTTTAATGGTGCTGT-ATTTTA GATTTTCTAAAACAT TERM 3738 3120795 - 3120750 - R 93 -10.7 -3.74315 | gap 1, opp_overlap 3120754 3120756, overlap 3120748 3120756 AAAAATCTCAAAATA TAGCA-ACAGCACCACTAAAGC CTT GCTTTAATGGTGCTGTATTTTA GATTTTCTAAAACAT TERM 3739 3120754 - 3120790 + r 100 -15.3 -4.4595 | opp_overlap 3120748 3120750 3120756, overlap 3120756 ATCTCAAAATATAGC AACAGCACCACTAAAGC CTT GCTTTAATGGTGCTGTA TTTTAGATTTTCTAA TERM 3740 3120756 - 3120788 + r 100 -17.9 -3.8221 | opp_overlap 3120756 3120748 3120750, overlap 3120754 CTCAAAATATAGCAA CAGCACCACTAAAGC CTT GCTTTAATGGTGCTG TATTTTAGATTTTCT TERM 3741 3120788 - 3120756 - R 100 -20.1 -3.46304 | opp_overlap 3120754 3120756, overlap 3120748 3120750 CTCAAAATATAGCAA CAGCACCACTAAAGC CTT GCTTTAATGGTGCTG TATTTTAGATTTTCT CKL_3071 3122112 - 3120937 - | hypothetical protein CKL_3072 3123249 - 3122125 - | hypothetical protein TERM 3742 3124791 - 3124749 - g 71 -8.6 -2.91582 | opp_overlap 3124756, overlap 3124732 3124752 3124753 TATTTCACTTAGAGA TAAGGTATCCAATCTTTCCA TAC CAGAAGGATTGGATACTCTA AACAAACAATATTTA TERM 3743 3124788 - 3124752 - g 75 -8.1 -3.60525 | opp_overlap 3124756, overlap 3124749 3124753 TTCACTTAGAGATAA GGTATCCAATCTTTCCA TAC CAGAAGGATTGGATACT CTAAACAAACAATAT TERM 3744 3124787 - 3124753 - g 86 -11.6 -2.75993 | opp_overlap 3124756, overlap 3124752 3124749 TCACTTAGAGATAAG GTATCCAATCTTTCCA TAC CAGAAGGATTGGATAC TCTAAACAAACAATA TERM 3745 3125029 - 3124989 - g 72 -4.8 -4.74013 | TTCAAATATAGAAAA TGGAAATGAGGGTATA AGCAGCTTA TATACCCGCATCACCA CAGCCTTAAATAATT CKL_3073 3123499 - 3125055 + | hypothetical protein TERM 3746 3125099 - 3125056 - T 100 -25.8 -3.25491 | opp_overlap 3125065, overlap 3125065 AATTTACAGCAGTAA TTGTGAAAAGCCTTTTCCTA AATA TAGGAAAAGGCTTTTCACAA TTCACAGTGCACAAT TERM 3747 3125090 - 3125065 - T 100 -14.9 -4.15106 | opp_overlap 3125065, overlap 3125056 CAGTAATTGTGAAAA GCCTTTTCCTA AATA TAGGAAAAGGC TTTTCACAATTCACA TERM 3748 3125065 - 3125090 + T 100 -14.9 -4.14392 | opp_overlap 3125065 3125056 CAGTAATTGTGAAAA GCCTTTTCCTA AATA TAGGAAAAGGC TTTTCACAATTCACA CKL_3074 3128479 - 3125162 - | surface-layer protein TERM 3749 3127828 - 3127842 + g 84 -10 -3.47804 | opp_overlap 3127825 TATTTATTAAATTTT CCGTAC TGA GTACGG TTACTTCTGAATTAT nifK/nifB 3131313 - 3128641 - | NifK/nifB nifE3 3132671 - 3131337 - | NifE3 TERM 3750 3132701 - 3132736 + r 70 -8.5 -2.74061 | gap 1, opp_overlap 3132702 3132703, overlap 3132700 3132698 AAAGTTTTTTATTAA AG-TGAATTCAGGATG TATTC CATCCTGAATTCAGCA AATTTTTGATTCTTA TERM 3751 3132734 - 3132702 - R 95 -12.2 -3.73072 | opp_overlap 3132701 3132700 3132698, overlap 3132703 AAGTTTTTTATTAAA GTGAATTCAGGATG TATTC CATCCTGAATTCAG CAAATTTTTGATTCT TERM 3752 3132733 - 3132703 - R 100 -15.7 -2.83522 | opp_overlap 3132701 3132700 3132698, overlap 3132702 AGTTTTTTATTAAAG TGAATTCAGGATG TATTC CATCCTGAATTCA GCAAATTTTTGATTC nifK7 3134113 - 3132749 - | NifK7 nifD10 3135714 - 3134113 - | NifD10 CKL_3079 3136128 - 3135736 - | nitrogen fixation regulatory protein II CKL_3080 3136469 - 3136143 - | nitrogen fixation regulatory protein I nifH4 3137453 - 3136635 - | NifH4 TERM 3753 3137835 - 3137856 + H 74 -6.1 -4.45696 | opp_overlap 3137849, overlap 3137849 TTTGTCATTTATTAT TATTTTTAA AAAA TTAAAAATA TATTTTTTATTTAAA TERM 3754 3138294 - 3138306 + G 80 -7.7 -4.28977 | GGTTTTGTAATTTGC GGACA GGA TGTCC TTTTAGATATATTAT CKL_3082 3138018 - 3138980 + | molybdate-binding protein CKL_3083 3139938 - 3138988 - | hypothetical protein TERM 3755 3139220 - 3139254 + g 100 -16.8 -2.74563 | opp_overlap 3139227, overlap 3139227 TTTTCTCCTTTTTTG CTTATAACTTCTATAG TAT CTGTAGAAGTTATAAG TGATTCCACTCTGCC TERM 3756 3139227 - 3139247 + g 78 -9.1 -3.39595 | opp_overlap 3139227, overlap 3139220 CTTTTTTGCTTATAA CTTCTATAG TAT CTGTAGAAG TTATAAGTGATTCCA TERM 3757 3139324 - 3139308 - G 90 -10.9 -3.90328 | opp_overlap 3139310 TAGAATCTCCATAAA TACCCAG GGC CTGGGTA TCATAAGCCATTATA TERM 3758 3139310 - 3139322 + g 73 -9.1 -2.79133 | opp_overlap 3139308 GAATCTCCATAAATA CCCAG GGC CTGGG TATCATAAGCCATTA mop 3140255 - 3140049 - | Mop TERM 3759 3140387 - 3140352 - R 75 -7.8 -3.93166 | overlap 3140358 TTTTTAAAAAACCAA GAAAAACCACAAGATA TATT TATCCTATAGTTTTCC CTTAATTTGATCTCA TERM 3760 3140381 - 3140358 - R 70 -3.2 -5.30199 | overlap 3140352 AAAAACCAAGAAAAA CCACAAGATA TATT TATCCTATAG TTTTCCCTTAATTTG CKL_3085 3141459 - 3140389 - | transport protein modB 3142147 - 3141461 - | ModB modA 3143034 - 3142225 - | hypothetical protein TERM 3761 3142382 - 3142395 + g 77 -8.1 -3.89346 | TCCTCCGGTGCAGTG GCTGC AATC GCAGC TTTATCAGATACCAG TERM 3762 3142684 - 3142708 + g 100 -8.8 -5.63236 | opp_overlap 3142683 ATTTTGCAAAAGATT TTTAATGGTA TCACT TACCATTAAA TTTTTATTTTTGAGT CKL_3088 3143420 - 3143803 + | hypothetical protein CKL_3089 3144896 - 3143835 - | methyl-accepting chemotaxis protein TERM 3763 3143977 - 3144006 + g 93 -8.7 -4.86029 | GCTTTGGCAACAGCT GATTGTATCCTGT CTGT AAGGGATACAATC TTTTGTGTTGTTTCT TERM 3764 3144130 - 3144118 - G 73 -7.7 -3.65529 | opp_overlap 3144118 ATAGCTGCATTTAAA CCAAG CAT CTTGG TTTTATCCGCTATGT TERM 3765 3144118 - 3144130 + g 82 -7.7 -4.4195 | opp_overlap 3144118 ATAGCTGCATTTAAA CCAAG CAT CTTGG TTTTATCCGCTATGT CKL_3090 3145699 - 3145256 - | hypothetical protein TERM 3766 3145428 - 3145449 + g 70 -8.1 -3.14839 | overlap 3145426 GACTTAAAATTCTCT TTCACACTA TACA TGGTGTGAA TGTTAAATCTGTCTA CKL_3091 3146424 - 3145696 - | hypothetical protein TERM 3767 3146675 - 3146657 - gR 86 -10.4 -3.15249 | TATATTCTCTATTAA TAGTCTAC AAG GTAGACTA AAAATCCCCTACCAA CKL_3092 3146409 - 3147428 + | transposase TERM 3768 3147549 - 3147527 - TR 78 -9.9 -2.63858 | gap 1, opp_overlap 3147527, overlap 3147526 TAGCAGAGTTACAAG CTC-CCGCCT CTTT AGGCGGTGAG TCATTGACAGCTCTC TERM 3769 3147527 - 3147549 + Tr 78 -9.9 -2.72049 | gap 1, opp_overlap 3147527 3147526 TAGCAGAGTTACAAG CTC-CCGCCT CTTT AGGCGGTGAG TCATTGACAGCTCTC CKL_3093 3148336 - 3147701 - | hypothetical protein TERM 3770 3148454 - 3148485 + r 70 -8.2 -3.10409 | opp_overlap 3148461, overlap 3148452 3148461 TATTAAGGTGGGCTC TTAAAAAGACGTTT TTTA AAACGCCTTTTTAG TTAAATGCATTAATA TERM 3771 3148478 - 3148461 - R 74 -6.3 -4.56597 | opp_overlap 3148452 3148461 3148454 GTGGGCTCTTAAAAA GACGTTT TTTA AAACGCC TTTTTAGTTAAATGC CKL_3094 3149380 - 3148568 - | hypothetical protein TERM 3772 3150721 - 3150703 - g 70 -4.6 -4.8384 | overlap 3150705 3150712 TAAAGAATTTAAAAA TGCAAAAG ATA CTTTTGAA GTAATTAAATCCGAT TERM 3773 3150905 - 3150894 - g 85 -3 -6.08563 | AAGATATAAAAAAAA TAGA AAAC TCTA TAAACAAAGGATACT TERM 3774 3150990 - 3150971 - g 75 -2.8 -5.56372 | opp_overlap 3150974 AAATTAAAACAAAAA TACCCATC TATA GCTGGATA TTATGATATAAATAT CKL_3095 3149651 - 3151516 + | hypothetical protein CKL_3096 3151542 - 3152405 + | tyrosine recombinase CKL_3097 3152429 - 3153172 + | hypothetical protein TERM 3775 3153191 - 3153214 + F 82 -8.3 -4.58395 | opp_overlap 3153191 3153194 TAACCATCTACTAAA TAACAGTGA TTAAAC TCACTGTTA TTTTTCAAAAATCAG TERM 3776 3153214 - 3153191 - f 76 -8.3 -3.7791 | opp_overlap 3153191, overlap 3153194 TAACCATCTACTAAA TAACAGTGA TTAAAC TCACTGTTA TTTTTCAAAAATCAG TERM 3777 3155458 - 3155421 - g 87 -11.3 -3.06117 | opp_overlap 3155429, overlap 3155416 3155424 AATATAACAATTACA GCAGCTGATGATGCAAC AACA GTTGCAGCATCTGCTCC GGCACCTACATTTGT TERM 3778 3155455 - 3155424 - g 86 -11.6 -2.73622 | opp_overlap 3155429, overlap 3155421 3155416 ATAACAATTACAGCA GCTGATGATGCAAC AACA GTTGCAGCATCTGC TCCGGCACCTACATT CKL_3098 3153393 - 3156509 + | hypothetical protein TERM 3779 3156614 - 3156586 - T 77 -5.4 -5.01535 | gap 1, opp_overlap 3156587 3156588 3156590, overlap 3156590 GTATAAGCATAAAAA TAAACGGTCATTC ATTA GAATGACCGTA-A TTTTGTAGTTATTTA TERM 3780 3156587 - 3156614 + T 81 -7 -4.64157 | opp_overlap 3156586 3156590, overlap 3156588 3156590 TATAAGCATAAAAAT AAACGGTCATTC ATTA GAATGACCGTAA TTTTGTAGTTATTTA TERM 3781 3156588 - 3156613 + T 88 -10.5 -3.36867 | opp_overlap 3156586 3156590, overlap 3156587 3156590 ATAAGCATAAAAATA AACGGTCATTC ATTA GAATGACCGTA ATTTTGTAGTTATTT TERM 3782 3156590 - 3156611 + T 100 -13.1 -3.22817 | opp_overlap 3156590 3156586, overlap 3156588 3156587 AAGCATAAAAATAAA CGGTCATTC ATTA GAATGACCG TAATTTTGTAGTTAT TERM 3783 3156611 - 3156590 - T 100 -13.1 -5.00267 | opp_overlap 3156588 3156587 3156590, overlap 3156586 AAGCATAAAAATAAA CGGTCATTC ATTA GAATGACCG TAATTTTGTAGTTAT CKL_3099 3157181 - 3156996 - | hypothetical protein CKL_3100 3157675 - 3157283 - | hypothetical protein CKL_3101 3157845 - 3157639 - | hypothetical protein TERM 3784 3157940 - 3157979 + r 100 -12.6 -4.23486 | opp_overlap 3157948 3157962, overlap 3157938 3157941 TCTATCTAAAACCTC CTTTTAAAGTTTTTAAAG TTAA CTTTAAAAACTTTAAAAC TTATTTTAGGTGATT TERM 3785 3157941 - 3157978 + r 100 -16.1 -3.13007 | opp_overlap 3157948 3157962, overlap 3157940 3157938 CTATCTAAAACCTCC TTTTAAAGTTTTTAAAG TTAA CTTTAAAAACTTTAAAA CTTATTTTAGGTGAT TERM 3786 3157971 - 3157948 - R 86 -9.8 -3.5394 | opp_overlap 3157941 3157940 3157938, overlap 3157962 AAACCTCCTTTTAAA GTTTTTAAAG TTAA CTTTAAAAAC TTTAAAACTTATTTT CKL_3102 3158632 - 3158039 - | hypothetical protein TERM 3787 3158344 - 3158359 + g 82 -4.8 -5.40464 | GTTGATCCACATATT TATTCA TTTT TGAATA TTTTTCTTTATCCTG TERM 3788 3158928 - 3158965 + r 100 -17.4 -3.50466 | opp_overlap 3158935, overlap 3158921 3158935 AACTATTCTATATTT TTAATAACTGTGGGAA AATAAC TTCCCACAGTTATTAA TTAATTCATATTTTT TERM 3789 3158935 - 3158958 + r 93 -11.1 -3.86031 | opp_overlap 3158935, overlap 3158928 3158921 CTATATTTTTAATAA CTGTGGGAA AATAAC TTCCCACAG TTATTAATTAATTCA TERM 3790 3158958 - 3158935 - R 95 -11.8 -3.64487 | opp_overlap 3158935 3158928 3158921 CTATATTTTTAATAA CTGTGGGAAA ATAA CTTCCCACAG TTATTAATTAATTCA CKL_3103 3159321 - 3159028 - | hypothetical protein CKL_3104 3159572 - 3159390 - | preprotein translocase subunit TERM 3791 3159553 - 3159534 - G 82 -8.6 -3.98944 | opp_overlap 3159529 3159534, overlap 3159529 3159526 CAGAAAAGAACAGAA GAGTACCC CTAA AGGTACTC TCAGTTTTGATTTAT CKL_3105 3163442 - 3159648 - | hypothetical protein TERM 3792 3160452 - 3160467 + g 70 -6.2 -4.31837 | overlap 3160427 AGTTGCAACGTCAGC TTTAGC AGTT GCTAAA TTTGTTGGATTTGTT TERM 3793 3161936 - 3161956 + g 73 -8.3 -3.38272 | opp_overlap 3161935 3161936 CTATACTATAGAAAT CTCCAACTG TGG CAGTTGCAG TTGTACCTGATACTC TERM 3794 3161956 - 3161936 - G 70 -8.3 -3.0636 | opp_overlap 3161936, overlap 3161935 CTATACTATAGAAAT CTCCAACTG TGG CAGTTGCAG TTGTACCTGATACTC CKL_3106 3163887 - 3163480 - | hypothetical protein TERM 3795 3163526 - 3163550 + g 70 -4.3 -4.82548 | TCTAGTGTGGCATCA CCAAAACTG TCAATTC CAGTTGTGG TTTTATCTATTTTTA TERM 3796 3163904 - 3163942 + r 71 -7.8 -3.6363 | gap 2, opp_overlap 3163911, overlap 3163909 3163913 ACAAATCTCCATATT TTATATAGCCATGGGGAA AGAAC TTCCCCATG-CTAT-TAA TTAATTTATAGTCCT TERM 3797 3163909 - 3163938 + r 86 -10.2 -3.52317 | gap 1, opp_overlap 3163911, overlap 3163904 3163913 TCTCCATATTTTATA TAGCCATGGGGAA AGAAC TTCCCCATG-CTA TTAATTAATTTATAG TERM 3798 3163936 - 3163911 - R 74 -9.1 -2.90763 | gap 1, opp_overlap 3163909 3163904 3163913 TCCATATTTTATATA GCCATGGGGAAA GAA CTTCCCCATG-C TATTAATTAATTTAT TERM 3799 3163913 - 3163935 + r 93 -12.1 -2.58425 | opp_overlap 3163911, overlap 3163909 3163904 CATATTTTATATAGC CATGGGGAA AGAAC TTCCCCATG CTATTAATTAATTTA CKL_3107 3167889 - 3163948 - | hypothetical protein TERM 3800 3166402 - 3166417 + g 72 -4.8 -4.74598 | ATTTAATCCATAAGC TGATAA ATTT TTATCA TTTATTTTAAATTTG TERM 3801 3167915 - 3167932 + r 72 -5.7 -4.50993 | CCTCCTCGATTAAGT GAATTTT AATT AAAATTC TTTCTCTTTATTTAA TERM 3802 3167985 - 3167955 - R 95 -7.2 -5.4833 | opp_overlap 3167943 3167941 3167955 3167953 3167963 3167972, overlap 3167972 TTATTTAATAAAAAA TTATTAAATATATA TAA TATATATTTTATAA TATATACTTTCTTAA CKL_3108 3169507 - 3168458 - | hypothetical protein CKL_3109 3169706 - 3170146 + | hypothetical protein CKL_3110 3170220 - 3170639 + | hypothetical protein TERM 3803 3170683 - 3170712 + T 71 -8 -3.24662 | opp_overlap 3170682 TGGGATAAAAACATT TAGACCAGCA TTTATTTTTC TGCTGGTCTA TTAACTATCTTTTAT CKL_3111 3171612 - 3170713 - | hypothetical protein CKL_3112 3172657 - 3171692 - | sensor kinase CKL_3113 3173159 - 3173617 + | hypothetical protein TERM 3804 3173704 - 3173726 + G 79 -4.9 -5.27779 | gap 1, overlap 3173707 CACTGGATAGAGATT CTCCTCAGGG GCAT TCCTGAG-AG TTTTTTAATGTTAGC TERM 3805 3173901 - 3173917 + G 74 -6.6 -4.28111 | AAGTCTTCTAGTTAT TCAAGG CATGC CCTTGA TTTCTTCCTCATATG CKL_3114 3173677 - 3174150 + | hypothetical protein TERM 3806 3174139 - 3174150 + F 70 -3 -5.27023 | opp_overlap 3174139 AAACATATTAATTTA TCAA AAAT TTGA TTTTCTTTTTAAAAT TERM 3807 3174152 - 3174203 + F 88 -7.9 -4.84033 | TATCAAAAATTTGAT TTTCTTTTTAAAATATTAAAA ATTTCATTTA TTTTAATATTTTAAGAAGGAA TTTTACTTTTTATGT CKL_3115 3174264 - 3174737 + | hypothetical protein CKL_3116 3174724 - 3175380 + | hypothetical protein TERM 3808 3175549 - 3175571 + F 74 -5 -5.0925 | opp_overlap 3175535, overlap 3175542 3175539 ACTTTTAAGTAAAAA TTACTGATTT ATG AAATTGGTAA TTTTTACTTTTCAGA TERM 3809 3176544 - 3176560 + G 78 -2.3 -5.73978 | opp_overlap 3176538 GTAATACTATTTCTG TGAAAAA TAC TTCTTCA TTTTTTATTTATGAT CKL_3117 3175628 - 3177481 + | sensor kinase TERM 3810 3177520 - 3177479 - T 86 -9 -4.3739 | gap 1, opp_overlap 3177481 3177484, overlap 3177481 TACTCCCTTACAAAA TAGAAGAGTTTGCAGGTTT AATAA AAACC-ACAAACTCTTCTC TAATTAAATTTTAAA TERM 3811 3177518 - 3177481 - T 93 -11.6 -3.79419 | gap 1, opp_overlap 3177481 3177484, overlap 3177479 CTCCCTTACAAAATA GAAGAGTTTGCAGGTTT AATAA AAACC-ACAAACTCTTC TCTAATTAAATTTTA TERM 3812 3177481 - 3177518 + T 78 -9.4 -2.9652 | gap 1, opp_overlap 3177481 3177479, overlap 3177484 CTCCCTTACAAAATA GAAGAGTTTGCAGGTTT AATAA AAACCA-CAAACTCTTC TCTAATTAAATTTTA CKL_3118 3179236 - 3177524 - | methyl-accepting chemotaxis protein TERM 3813 3178552 - 3178542 - G 70 -4 -5.06414 | GTGTTTGAAGAAAAA TCAA AAT TTGA AAATTTATCTACCAA TERM 3814 3179427 - 3179396 - R 95 -9 -4.84017 | gap 1, opp_overlap 3179396 3179400, overlap 3179400 AATTTTTTACAAAAA TAAATCGGTAGGCTA TTA TA-CCTACCAATTTA TTATATATTATATAG TERM 3815 3179423 - 3179400 - R 75 -5.4 -4.96501 | gap 1, opp_overlap 3179400 3179396, overlap 3179396 TTTTACAAAAATAAA TCGGTAGGCTA TTA TA-CCTACCAA TTTATTATATATTAT gabT 3180863 - 3179487 - | hypothetical protein CKL_3120 3182242 - 3181010 - | transcriptional regulator TERM 3816 3181560 - 3181576 + g 74 -2.3 -5.64421 | ACAATAAAAGTATCT TCAATTA TAT TAATGGA TTTTTTATTTAGCCT TERM 3817 3182301 - 3182269 - R 100 -17.3 -4.20817 | opp_overlap 3182259 CATATTTTAAAAGAA CGCCCTTATTTTGAA ATT TTCAAAATAAAGGCG TCTAAATAAATTTTC TERM 3818 3182488 - 3182529 + r 73 -5.4 -4.7219 | gap 1, opp_overlap 3182491 3182492, overlap 3182491 3182492 GTTAATCAGCATTTA AAAG-GAGCTTACAATG GCTAAATAA CATTGTAAGCTCTCTTC TTTTATATTACTCTA TERM 3819 3182525 - 3182491 - R 75 -7.3 -4.2231 | opp_overlap 3182491 3182488 3182492, overlap 3182492 AATCAGCATTTAAAA GGAGCTTACAATG GCTAAATAA CATTGTAAGCTCT CTTCTTTTATATTAC TERM 3820 3182491 - 3182526 + r 78 -7.1 -4.45115 | gap 1, opp_overlap 3182491 3182492, overlap 3182488 3182492 AATCAGCATTTAAAA G-GAGCTTACAATG GCTAAATAA CATTGTAAGCTCTC TTCTTTTATATTACT TERM 3821 3182492 - 3182524 + r 93 -10.8 -3.81271 | opp_overlap 3182491 3182492, overlap 3182491 3182488 ATCAGCATTTAAAAG GAGCTTACAATG GCTAAATAA CATTGTAAGCTC TCTTCTTTTATATTA TERM 3822 3182524 - 3182492 - R 88 -10.8 -3.12663 | opp_overlap 3182492 3182491 3182488, overlap 3182491 ATCAGCATTTAAAAG GAGCTTACAATG GCTAAATAA CATTGTAAGCTC TCTTCTTTTATATTA CKL_3121 3183086 - 3182532 - | protein kinase TERM 3823 3183129 - 3183095 - R 81 -10.3 -2.68545 | opp_overlap 3183096, overlap 3183094 3183092 TTTTCACAATAACAC CTCCTTTGTTTTTAT GTAAT ATAAAAACAAAGGAT TTAAAATACCATTAA TERM 3824 3183096 - 3183128 + r 100 -14.5 -3.61103 | opp_overlap 3183095 3183094 3183092 TTTCACAATAACACC TCCTTTGTTTTTATG TAA TATAAAAACAAAGGA TTTAAAATACCATTA TERM 3825 3183358 - 3183307 - R 100 -15.6 -3.61103 | opp_overlap 3183320 3183323, overlap 3183308 3183320 3183323 CAATTTTATTTGAAA TTCTCACTTAAAATAATCCTAGTT GTTC AACTAGGATTATTTTGAATGAGAG AGTCCACGGCAATTT TERM 3826 3183357 - 3183308 - R 100 -19.1 -2.7634 | opp_overlap 3183320 3183323, overlap 3183307 3183320 3183323 AATTTTATTTGAAAT TCTCACTTAAAATAATCCTAGTT GTTC AACTAGGATTATTTTGAATGAGA GAGTCCACGGCAATT TERM 3827 3183345 - 3183320 - R 100 -12.1 -4.18762 | opp_overlap 3183320 3183323, overlap 3183308 3183307 3183323 AATTCTCACTTAAAA TAATCCTAGTT GTTC AACTAGGATTA TTTTGAATGAGAGAG TERM 3828 3183320 - 3183345 + r 100 -12.1 -4.18018 | opp_overlap 3183320 3183308 3183307 3183323, overlap 3183323 AATTCTCACTTAAAA TAATCCTAGTT GTTC AACTAGGATTA TTTTGAATGAGAGAG TERM 3829 3183323 - 3183342 + r 88 -9.4 -4.21812 | opp_overlap 3183320 3183308 3183307 3183323, overlap 3183320 TCTCACTTAAAATAA TCCTAGTT GTTC AACTAGGA TTATTTTGAATGAGA TERM 3830 3183342 - 3183323 - R 88 -9.4 -4.21812 | opp_overlap 3183323 3183320, overlap 3183320 3183308 3183307 TCTCACTTAAAATAA TCCTAGTT GTTC AACTAGGA TTATTTTGAATGAGA CKL_3122 3183903 - 3183343 - | hypothetical protein CKL_3123 3184761 - 3184114 - | hemolysin III-related protein CKL_3124 3184968 - 3185639 + | hypothetical protein TERM 3831 3185667 - 3185633 - T 93 -8 -5.25656 | opp_overlap 3185633 3185637, overlap 3185637 AAAATTATTAAAAAA TGAATGATTGAAGCCC TTT AGGTTTCAATCATTTA TTTTAACTTTATCTT TERM 3832 3185633 - 3185667 + T 100 -11.7 -4.42081 | opp_overlap 3185633 3185637, overlap 3185637 AAAATTATTAAAAAA TGAATGATTGAAGCC CTTTA GGTTTCAATCATTTA TTTTAACTTTATCTT TERM 3833 3185637 - 3185663 + T 100 -10.3 -4.74598 | opp_overlap 3185633 3185637, overlap 3185633 TTATTAAAAAATGAA TGATTGAAGCC CTTTA GGTTTCAATCA TTTATTTTAACTTTA TERM 3834 3185663 - 3185637 - T 80 -8.8 -3.96447 | opp_overlap 3185637 3185633, overlap 3185633 TTATTAAAAAATGAA TGATTGAAGCCC TTT AGGTTTCAATCA TTTATTTTAACTTTA CKL_3125 3186613 - 3185657 - | hypothetical protein TERM 3835 3185983 - 3185999 + g 72 -5.1 -4.74706 | opp_overlap 3185983 AAAGAATACGAAAAC TGCTGTT TGA AACTGCA TTTTTAAATATTGAA aspS 3188747 - 3186975 - | aspartyl-tRNA synthetase TERM 3836 3188464 - 3188487 + g 71 -7.5 -3.37634 | overlap 3188463 3188463 TCTACCATCCCCGTT GGAATTTCC ATATTA GGAGATTCC CTTTTTACAATGGTC hisS 3190084 - 3188834 - | histidyl-tRNA synthetase TERM 3837 3188910 - 3188934 + g 83 -8 -4.19735 | CCGTCTTCCATCCTC TTGAATTTGG CAATA CCAGATTCAA TTTCATTTTCACCCA TERM 3838 3189880 - 3189895 + g 80 -6.2 -4.9218 | TTCCTGCCCTGTCTA GAAATG TATA CATTTC TTTTTGTACTACATC CKL_3128 3191569 - 3190121 - | coproporphyrinogen III oxidase TERM 3839 3191173 - 3191191 + g 78 -9.6 -3.34398 | overlap 3191171 3191174 TTGCTGCTACATTTA TGCAAAGC TCT GCTTTGCG TCTTTCACAACAAAA TERM 3840 3191174 - 3191190 + g 82 -10.9 -2.60496 | overlap 3191173 3191171 TGCTGCTACATTTAT GCAAAGC TCT GCTTTGC GTCTTTCACAACAAA TERM 3841 3191240 - 3191211 - G 76 -8.8 -3.42342 | opp_overlap 3191211, overlap 3191208 3191209 TCACAACAAAAATGA TTACGAAAGTAT TCAACT ATACCTTCGTAA TTTTCCCCTTTCTCT TERM 3842 3191211 - 3191240 + g 74 -6.6 -4.26792 | opp_overlap 3191208 3191209 3191211 TCACAACAAAAATGA TTACGAAAGTAT TCAACT ATACCTTCGTAA TTTTCCCCTTTCTCT CKL_3129 3192211 - 3191612 - | hypothetical protein dtd 3192742 - 3192293 - | D-tyrosyl-tRNA deacylase relA 3194997 - 3192817 - | RelA TERM 3843 3193651 - 3193681 + g 70 -8.4 -3.07142 | overlap 3193651 GTCAATACTTGGTCC TTTGGGGGTATTTG ACA CAAATACCTCTACA ATTTCTCCTGTTTTA TERM 3844 3193651 - 3193682 + g 71 -6.8 -4.13711 | gap 1, overlap 3193651 GTCAATACTTGGTCC TT-TGGGGGTATTTG ACA CAAATACCTCTACAA TTTCTCCTGTTTTAA TERM 3845 3195044 - 3195015 - R 91 -10.1 -4.10657 | opp_overlap 3195016 3195019, overlap 3195016 3195019 TGATACTCCCTAAAA TCAATGGCTGGTT TATA AACCAGCCATTAT TTTTTGTTAATATTA TERM 3846 3195016 - 3195043 + r 100 -11.4 -5.54885 | opp_overlap 3195015 3195016 3195019, overlap 3195019 GATACTCCCTAAAAT CAATGGCTGGTT TATA AACCAGCCATTA TTTTTTGTTAATATT TERM 3847 3195043 - 3195016 - R 100 -13.6 -3.06073 | opp_overlap 3195016 3195019, overlap 3195015 3195019 GATACTCCCTAAAAT CAATGGCTGGTT TATA AACCAGCCATTA TTTTTTGTTAATATT TERM 3848 3195040 - 3195019 - R 100 -13.1 -3.67175 | opp_overlap 3195016 3195019, overlap 3195016 3195015 ACTCCCTAAAATCAA TGGCTGGTT TATA AACCAGCCA TTATTTTTTGTTAAT TERM 3849 3195019 - 3195040 + r 100 -13.1 -4.82661 | opp_overlap 3195019 3195016 3195015, overlap 3195016 ACTCCCTAAAATCAA TGGCTGGTT TATA AACCAGCCA TTATTTTTTGTTAAT apt 3195615 - 3195097 - | hypothetical protein TERM 3850 3195409 - 3195398 - G 74 -5.8 -4.68103 | CTAACTGGAACAAAA CCTG CTCC CAGG GTATAGGCTATGGGA CKL_3133 3196965 - 3195802 - | transposase CKL_3134 3197278 - 3196958 - | hypothetical protein CKL_3135 3198156 - 3197305 - | hypothetical protein TERM 3851 3198277 - 3198254 - R 81 -3.2 -5.88565 | opp_overlap 3198256, overlap 3198256 TTCACAATAAAAAAA TCTAGAGTTT TAAT ATACTCTAAA TTTTTTATTTTATCT secF 3199207 - 3198323 - | preprotein translocase subunit SecF CKL_3137 3200483 - 3199209 - | preprotein translocase subunit SecD TERM 3852 3199593 - 3199575 - G 71 -5.2 -4.66535 | overlap 3199583 AACTGTTAAAAGAAA CCCAGCAA TAC CTGCCAGG GTAAGGGTGACACCT TERM 3853 3200056 - 3200069 + g 74 -6.7 -4.23892 | opp_overlap 3200056 3200054 TTTTGAGAGTCAAGA GATGC AGTG GCATC TTTTACATCCTTACC CKL_3138 3202003 - 3200633 - | hypothetical protein TERM 3854 3201169 - 3201196 + g 89 -8.7 -4.67943 | opp_overlap 3201169 3201180 3201181 CGGGTTCTACAGATA TTTCTTCAAAA CCTTCA TTTTGAAGAAA TTTTATATCTTCAAA TERM 3855 3201196 - 3201169 - G 76 -9.4 -2.98823 | opp_overlap 3201169, overlap 3201180 3201181 CGGGTTCTACAGATA TTTCTTCAAAAC CTTC ATTTTGAAGAAA TTTTATATCTTCAAA TERM 3856 3202073 - 3202040 - R 100 -13.4 -4.30987 | opp_overlap 3202040 3202068 AGTTGTCATAATAAA TTTTAGGCAGCAAC TATTTT GTTACTGCCTAAAA TTTTATGTTAGTTTT TERM 3857 3202040 - 3202073 + r 100 -11.2 -4.77629 | opp_overlap 3202040, overlap 3202068 AGTTGTCATAATAAA TTTTAGGCAGCAAC TATTTT GTTACTGCCTAAAA TTTTATGTTAGTTTT CKL_3139 3202218 - 3202081 - | hypothetical protein CKL_3140 3202728 - 3202360 - | hypothetical protein CKL_3141 3203101 - 3202802 - | preprotein translocase subunit tgt 3204284 - 3203154 - | queuine tRNA-ribosyltransferase TERM 3858 3203277 - 3203263 - G 80 -7.2 -4.60808 | overlap 3203257 TTATAAAAATACAAA TTGTGT ATT ACACAA AGTCTCATGGCAAGC queA 3205324 - 3204299 - | hypothetical protein ruvB 3206426 - 3205374 - | Holliday junction DNA helicase B ruvA 3207031 - 3206441 - | Holliday junction DNA helicase motor protein CKL_3146 3207800 - 3207204 - | hypothetical protein TERM 3859 3207583 - 3207604 + g 89 -7.5 -5.04601 | TACTCTCCACTTTTG TCATATTTA GTTT TAAATATGA TTTTTGCTTTATCCG CKL_3147 3208678 - 3207854 - | hydrolase TERM 3860 3208654 - 3208668 + g 83 -4.4 -5.52384 | TCAGTATAAATATGG TAATAA CTG TTATTA TTTTTTTCATACCGG TERM 3861 3208796 - 3208778 - R 100 -6 -6.09196 | TTTAAAATAAAAAAA GACGCCTT ATA AAAACGTC CTTTTTACAGTGGAT CKL_3148 3209561 - 3208821 - | hypothetical protein CKL_3149 3210331 - 3209651 - | hypothetical protein TERM 3862 3209884 - 3209902 + g 80 -7.4 -4.69464 | opp_overlap 3209884 3209883, overlap 3209885 AATCTATAAATATAT CTACAGGG GAA CCCTGTAC TTTTTCCACTATTTT TERM 3863 3209885 - 3209901 + g 87 -10.9 -3.40051 | opp_overlap 3209884 3209883, overlap 3209884 ATCTATAAATATATC TACAGGG GAA CCCTGTA CTTTTTCCACTATTT CKL_3150 3211829 - 3210411 - | transcriptional regulator TERM 3864 3211469 - 3211479 + g 70 -8.2 -3.00651 | opp_overlap 3211464, overlap 3211469 CTATTTGAAAGAATT CCCC GCT GGGG GTTTCTCCTGTAAAA TERM 3865 3211469 - 3211480 + g 74 -7.2 -4.01888 | opp_overlap 3211464, overlap 3211469 CTATTTGAAAGAATT CCCC GCTG GGGG TTTCTCCTGTAAAAT CKL_3151 3212811 - 3211915 - | hypothetical protein CKL_3152 3214758 - 3212980 - | hypothetical protein TERM 3866 3216624 - 3216607 - g 91 -4.3 -6.04953 | ATAGAAACAAAAAAA TTTTATT GCAG AATAAAA CCCAGACAAAAACCG CKL_3153 3214971 - 3217322 + | membrane carboxypeptidase TERM 3867 3217373 - 3217347 - T 76 -6.7 -4.4773 | opp_overlap 3217347 GTATATTAATCAAAA TTCCACCTT AGTATTTTA AAGGTGGAA TTAATTTTTGGGGTA CKL_3154 3218214 - 3217459 - | sporulation sigma factor SigF spoIIAB 3218652 - 3218224 - | anti-sigma F factor spoIIAA 3219002 - 3218667 - | hypothetical protein TERM 3868 3218898 - 3218908 + g 70 -4 -5.01553 | opp_overlap 3218898 GCCTTCCACATCCAA TTGA TTA TCAA TTTTATTTCTAACTT TERM 3869 3219145 - 3219122 - R 78 -9.8 -2.63596 | opp_overlap 3219127, overlap 3219127 GCTCATGTTATATGA CTAAAGTTTA ATAT TAAACTTTAG CATATGCAAAAATAT TERM 3870 3219564 - 3219506 - R 100 -18.8 -5.41941 | gap 1, opp_overlap 3219507 3219509 3219515, overlap 3219509 TAAACCAAATAAAAA TAATGAAAAGGTTATTGACGTGGTTTA TCAATG TAAACCAAGTCAATAACCTTTTCAT-A TATTTAAAACTAAAT TERM 3871 3219507 - 3219564 + r 100 -21.1 -3.36694 | opp_overlap 3219506 3219509, overlap 3219509 3219515 AAACCAAATAAAAAT AATGAAAAGGTTATTGACGTGGTTTAT CAAT GTAAACCAAGTCAATAACCTTTTCATA TATTTAAAACTAAAT TERM 3872 3219509 - 3219562 + r 100 -23.7 -3.25204 | opp_overlap 3219506 3219509, overlap 3219507 3219515 ACCAAATAAAAATAA TGAAAAGGTTATTGACGTGGTTTAT CAAT GTAAACCAAGTCAATAACCTTTTCA TATATTTAAAACTAA TERM 3873 3219562 - 3219509 - R 100 -23 -4.74052 | opp_overlap 3219509 3219507 3219515, overlap 3219506 ACCAAATAAAAATAA TGAAAAGGTTATTGACGTGGTTTA TCAATG TAAACCAAGTCAATAACCTTTTCA TATATTTAAAACTAA TERM 3874 3219515 - 3219556 + r 100 -16.9 -4.46493 | opp_overlap 3219509 3219506, overlap 3219509 3219507 TAAAAATAATGAAAA GGTTATTGACGTGGTTTAT CAAT GTAAACCAAGTCAATAACC TTTTCATATATTTAA speE 3220423 - 3219596 - | spermidine synthase CKL_3158 3222338 - 3220575 - | DNA modification methyltransferase TERM 3875 3221338 - 3221365 + g 100 -9.4 -4.93454 | TCATCTATAGAACTT TGAGGTATAAAA AATT TTTTATACCTTA TTTTATCTTTATTTA TERM 3876 3222230 - 3222249 + g 74 -2.2 -5.62045 | opp_overlap 3222230, overlap 3222232 ATTCCTTCTCAGATA TGTTAAAC TGCT GTTTAAAA TTTTTTATTATCTCT CKL_3159 3222484 - 3223365 + | polysaccharide deacetylase CKL_3160 3224172 - 3223450 - | UDP-N-acetyl-D-mannosaminuronic acid transferase CKL_3161 3224827 - 3224174 - | undecaprenyl-phosphate galactosephosphotransferase TERM 3877 3224600 - 3224614 + g 74 -2.2 -5.54264 | TACCATAGTTCTAAA TTTATA TAT TATGAA TTTTTTTCCATCTTT CKL_3162 3225903 - 3224899 - | hypothetical protein TERM 3878 3224974 - 3224957 - G 71 -5.6 -4.56093 | AATGTAACTATAAAA GCACTT AAAAAA AAGTGC AGATTTCCCATATTC CKL_3163 3227473 - 3225923 - | virulence factor MviN-related protein CKL_3164 3228600 - 3227488 - | glycosyltransferase TERM 3879 3227765 - 3227775 + g 70 -8.2 -3.05463 | opp_overlap 3227765 3227762 3227758 3227757 AGTAAAACCATAGGA GGGG CTC CCCC TTCACTGAAAGAAGT TERM 3880 3228403 - 3228415 + g 76 -3.4 -5.4477 | ATCCATTATATCTTT TCCA TGGGT TGGA TTTTTTTCAAACTTT CKL_3165 3229874 - 3228609 - | hypothetical protein TERM 3881 3229010 - 3229026 + g 76 -5.2 -5.06451 | opp_overlap 3229010 CCACTCCAAATATAG GATGAT CCACT ATCATC TTTTTTGCAATACTC CKL_3166 3230963 - 3229911 - | UDP-N-acetylglucosamine 2-epimerase CKL_3167 3231733 - 3230984 - | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase TERM 3882 3231127 - 3231162 + g 75 -9.8 -2.79004 | opp_overlap 3231136, overlap 3231126 3231136 CTTCTATAATTTTTC CTGGAAGAATAGTAGC CTGC GCTCCTATTCTTCCGC CTCTTTTAACGGTAA CKL_3168 3232886 - 3231786 - | hypothetical protein CKL_3169 3234255 - 3232939 - | polysaccharide biosynthesis protein CKL_3170 3235490 - 3234297 - | maltose-binding extracellular protein precursor CKL_3171 3237081 - 3235528 - | virulence factor MviN-related protein TERM 3883 3235617 - 3235602 - G 71 -6.8 -4.11692 | opp_overlap 3235604, overlap 3235605 CATTTACCTTTAAAA GCAGCA GCAT CGCTGC ATATACTAAAACACC TERM 3884 3235617 - 3235605 - G 74 -9.1 -3.09004 | opp_overlap 3235604, overlap 3235602 TTACCTTTAAAAGCA GCAGC ATC GCTGC ATATACTAAAACACC CKL_3172 3238222 - 3237236 - | hypothetical protein CKL_3173 3239569 - 3238280 - | hypothetical protein CKL_3174 3240601 - 3239606 - | glycosyltransferase TERM 3885 3239965 - 3239981 + g 77 -3.1 -5.52079 | TACTGCTTCTAGGTT TATAGTA GGC TATTATA TTTTTATTTTGATAT CKL_3175 3241790 - 3240669 - | glycosyltransferase TERM 3886 3240814 - 3240825 + g 74 -3 -5.3671 | ATAATATGTTCTATT TCTT CTTT AAGA TTTTTTCCTTCTATT TERM 3887 3241256 - 3241272 + g 85 -6.7 -5.00412 | overlap 3241266 TTTTATAAGGTGCAT TATTTAC TAT GTAAATA TTTTTACTTATCTTT CKL_3176 3242977 - 3241796 - | glycosyltransferase TERM 3888 3242800 - 3242812 + g 84 -3.5 -5.88565 | opp_overlap 3242800 TAGCGGGAATATCAA TATAA GCT TTATA TTTTTTTATTATACC capD 3244835 - 3242997 - | CapD TERM 3889 3244698 - 3244686 - G 71 -7.7 -3.53031 | TTTATTGCAAATCAA GGTCA CTA TGACC ACAGGAACAACAGAC TERM 3890 3245005 - 3244959 - R 100 -12.7 -3.33315 | opp_overlap 3244958 3244954 3244959, overlap 3244962 TTAACATTGCCATAA TCATTTTTGCTGTAATTTAAC ATATA GTTAAATTACAGCAAAATCAA ATGTTACCTTATTGC TERM 3891 3245002 - 3244962 - R 100 -14.4 -2.83449 | opp_overlap 3244959 3244958 3244954, overlap 3244959 ACATTGCCATAATCA TTTTTGCTGTAATTTAAC ATATA GTTAAATTACAGCAAAAT CAAATGTTACCTTAT galU 3245940 - 3245014 - | hypothetical protein TERM 3892 3245348 - 3245358 + g 71 -5.4 -4.59424 | AGTATAGCCATATTT GAAG GAG CTTC TTTTACTTTGGGTTT CKL_3179 3247050 - 3245965 - | hypothetical protein TERM 3893 3246130 - 3246142 + g 80 -7.7 -4.20783 | CTCCACTGATCTAGT GGCTT CAA AAGCC TTTCTTAAATAAGCT pgm2 3248805 - 3247078 - | Pgm2 TERM 3894 3249018 - 3249048 + H 72 -4.8 -4.82901 | opp_overlap 3249021, overlap 3249020 3249021 TATTAAACGTGTAGC CAACCCTTTAATTT TTA AAGTTAAAGGGATA TTTTTATGAAAGAAG TERM 3895 3249020 - 3249046 + H 72 -7.4 -4.03995 | opp_overlap 3249021, overlap 3249018 3249021 TTAAACGTGTAGCCA ACCCTTTAATTT TTA AAGTTAAAGGGA TATTTTTATGAAAGA TERM 3896 3249045 - 3249021 - H 73 -8.7 -3.07307 | opp_overlap 3249020 3249018 3249021 TAAACGTGTAGCCAA CCCTTTAATTT TTA AAGTTAAAGGG ATATTTTTATGAAAG TERM 3897 3249021 - 3249045 + H 88 -10.9 -3.01915 | opp_overlap 3249021, overlap 3249020 3249018 TAAACGTGTAGCCAA CCCTTTAATTT TTA AAGTTAAAGGG ATATTTTTATGAAAG TERM 3898 3249925 - 3249914 - g 70 -7.2 -3.6944 | overlap 3249912 GCCCGAAGACAAATA GCCC TCTG GGGC AAAGAACTTTTGGAT TERM 3899 3250276 - 3250258 - g 74 -6.2 -4.42238 | opp_overlap 3250257 TTATGTTAAGGAAAA TAAAAAAT CCG ATTTTTTA GATATTCCTGATATA speA1 3249077 - 3250537 + | SpeA1 CKL_3182 3251172 - 3250711 - | hypothetical protein CKL_3183 3253552 - 3251192 - | recombination and DNA strand exchange inhibitor protein CKL_3184 3255946 - 3253589 - | protease TERM 3900 3254282 - 3254300 + g 71 -6.8 -3.96531 | TCCTAAATTAATGTC TTCATTTC TTT GAAATGGA TTTATGCATATATGA TERM 3901 3254737 - 3254747 + g 71 -6.8 -3.97694 | TCAGACCAAATTTTT TCCC ATA GGGA TTATTATATATATTT TERM 3902 3256431 - 3256419 - g 70 -6.3 -4.18161 | opp_overlap 3256419 TACAAAGTTCCAAAA GTTCT TGC AGAAC TTGTGATTCAAATAG CKL_3185 3256302 - 3257099 + | hypothetical protein TERM 3903 3257140 - 3257112 - f 88 -7.5 -4.8543 | opp_overlap 3257115, overlap 3257115 TAATGTTTATAAAAA TAGGGGCTAGTTT TTA AAACTAGCTCTTA TTGAAGTTAACAAAA TERM 3904 3257115 - 3257137 + F 93 -11.4 -3.68222 | opp_overlap 3257112 3257115 TGTTTATAAAAATAG GGGCTAGTTT TTA AAACTAGCTC TTATTGAAGTTAACA TERM 3905 3257137 - 3257115 - f 76 -9.2 -3.01915 | opp_overlap 3257115, overlap 3257112 TGTTTATAAAAATAG GGGCTAGTTT TTA AAACTAGCTC TTATTGAAGTTAACA TERM 3906 3257689 - 3257675 - g 87 -8.6 -4.31835 | AATCCGTAGAACAAA TCCCTA TTA TAGGGA AAACTGGATTTAAAA CKL_3186 3257416 - 3258264 + | hypothetical protein CKL_3187 3259954 - 3258485 - | hypothetical protein TERM 3907 3259520 - 3259551 + g 71 -5.4 -4.65916 | opp_overlap 3259511 3259510 ATTAACTTTATCTGA TAAAACTATATATT GAAT AGTATACAGTTTTA TTTTCTTGCCATCCC TERM 3908 3259978 - 3260006 + H 74 -8.5 -3.16564 | overlap 3259976 TCACCTCCCCCTATT TATATTTTATAAA ATC TTTATAAAATGTA TTACTAAAATCACAA CKL_3188 3260101 - 3260877 + | hypothetical protein TERM 3909 3261091 - 3261071 - g 83 -10.5 -3.09648 | opp_overlap 3261063 3261062 3261070, overlap 3261063 TAACAGAGGTCAATA TGACCCTTG TGG CAAAGGTCA ATATGATCCTTGCAA CKL_3189 3261018 - 3261569 + | hypothetical protein TERM 3910 3261594 - 3261614 + T 100 -7.6 -6.11229 | opp_overlap 3261594 ATTAAATTATTATAA CTCAAGGT AACGA GCCTTGAG TTTTTTTATTTTACT CKL_3190 3262222 - 3261620 - | hypothetical protein pheT 3264796 - 3262418 - | phenylalanyl-tRNA synthetase subunit beta TERM 3911 3263154 - 3263168 + g 82 -5 -5.38249 | opp_overlap 3263154 CTCATTATACTATAA TCTTCT CCC AGAGGA TTTTTTATAATTACT pheS 3265868 - 3264849 - | phenylalanyl-tRNA synthetase subunit alpha TERM 3912 3265708 - 3265724 + g 71 -6.6 -4.01902 | TTTCCTATAATTGGT CTTTCC TCTTT GGAAAG TTCTTTCATGCCTCT TERM 3913 3265936 - 3265919 - R 100 -5.5 -6.20267 | TTAAAAATAAAAAAA GCCCCTC CCCT AAGGGAC GAACTAATCCGCGTT CKL_3193 3267031 - 3266231 - | methyltransferase TERM 3914 3266320 - 3266339 + g 85 -10.8 -3.28309 | opp_overlap 3266315, overlap 3266315 CATTTAAGGATTCAG CATTCCCA GGCA TGGGAATG TTCACTTCTATATCT TERM 3915 3267149 - 3267122 - R 100 -10 -4.82901 | opp_overlap 3267122 3267144 CTTGTGGGATAAAAA TAAGTGCAGCAA AACC TTGCTCCACTTA TTTTACGTGATTCTA TERM 3916 3267122 - 3267149 + r 91 -10 -4.24963 | opp_overlap 3267122, overlap 3267144 CTTGTGGGATAAAAA TAAGTGCAGCAA AACC TTGCTCCACTTA TTTTACGTGATTCTA rplT 3267527 - 3267168 - | 50S ribosomal protein L20 rpmI 3267754 - 3267557 - | 50S ribosomal protein L35 TERM 3917 3267836 - 3267822 - R 100 -9.2 -5.76633 | opp_overlap 3267822 TTACACATAAAAAAA GCGGCC TAA AGCCGC TCTTAAATACATCCC TERM 3918 3267822 - 3267836 + r 73 -8.5 -3.09878 | opp_overlap 3267822 TTACACATAAAAAAA GCGGC CTAAA GCCGC TCTTAAATACATCCC TERM 3919 3267915 - 3267894 - R 78 -8.1 -3.89695 | gap 1, overlap 3267889 TTCTTATAAACACAA CCTTACTAGC TTT GCT-GTAAGG TGAGAAACGGCTGTT thrS 3269923 - 3268010 - | threonyl-tRNA synthetase TERM 3920 3270130 - 3270153 + r 70 -8.2 -3.12595 | gap 1, overlap 3270127 CGTAGCAGTGCTTAT CCCCCA-CTTT AAA GAAGATGGGGG TGTTAGCTAATTGCA TERM 3921 3270228 - 3270204 - R 82 -2.8 -5.99154 | opp_overlap 3270204 GAGCAAATAAAAAAA CTCTTCCC TAAAACAAT GGGACGAG TTTTACCGTGGTTCC CKL_3197 3271421 - 3270522 - | hypothetical protein TERM 3922 3271906 - 3271916 + r 72 -6.8 -4.08767 | overlap 3271902 GGTTCGATTCCTGGT CTGG CCA CCAG TTTTGCGGGAGTGGC TERM 3923 3272095 - 3272148 + r 100 -12.2 -3.9941 | gap 1, opp_overlap 3272100, overlap 3272100 ATATAACAATGGTTT AAAAAGCAGCCTATAT-AATAACTT CTTAC AAGTTAGTCATATAGGCTGCTTTTA TTTGGTTCTAAAACC TERM 3924 3272143 - 3272100 - R 100 -14.3 -4.60255 | gap 1, opp_overlap 3272095 3272100 ACAATGGTTTAAAAA GCAGCCTATATAA-TAACTT CTTAC AAGTTAGTCATATAGGCTGC TTTTATTTGGTTCTA TERM 3925 3272100 - 3272143 + r 100 -12.1 -5.02357 | gap 1, opp_overlap 3272100, overlap 3272095 ACAATGGTTTAAAAA GCAGCCTATAT-AATAACTT CTTAC AAGTTAGTCATATAGGCTGC TTTTATTTGGTTCTA TERM 3926 3272462 - 3272482 + r 73 -7.7 -3.71265 | opp_overlap 3272439 3272436 3272464 ATTCTTATTTTATCA TAGAAAACC TTA GGTTTTTTA TTTAAGTAATCTCTT CKL_3203 3274738 - 3272501 - | histidine kinase-related protein TERM 3927 3274992 - 3275035 + H 100 -19.4 -3.66378 | opp_overlap 3274998 3275002, overlap 3274995 3274998 GGATAAGATCTCCTT TAATGAGCAAGATTCTAAAA TGAT TTTTAGAATCTTGCTTATTA TTTCGCTGCCATGTA TERM 3928 3274995 - 3275032 + H 100 -16.7 -3.96483 | opp_overlap 3274998 3275002, overlap 3274992 3274998 TAAGATCTCCTTTAA TGAGCAAGATTCTAAAA TGAT TTTTAGAATCTTGCTTA TTATTTCGCTGCCAT TERM 3929 3275029 - 3274998 - H 100 -16.2 -2.71144 | opp_overlap 3274995 3274992 3274998, overlap 3275002 GATCTCCTTTAATGA GCAAGATTCTAAAA TGAT TTTTAGAATCTTGC TTATTATTTCGCTGC TERM 3930 3274998 - 3275029 + H 100 -16.2 -4.10744 | opp_overlap 3274998 3275002, overlap 3274995 3274992 GATCTCCTTTAATGA GCAAGATTCTAAAA TGAT TTTTAGAATCTTGC TTATTATTTCGCTGC TERM 3931 3275025 - 3275002 - H 83 -9.8 -3.27298 | opp_overlap 3274998 3274995 3274992, overlap 3274998 TCCTTTAATGAGCAA GATTCTAAAA TGAT TTTTAGAATC TTGCTTATTATTTCG CKL_3204 3275218 - 3276378 + | aminotransferase TERM 3932 3276402 - 3276440 + T 86 -10.4 -3.21063 | opp_overlap 3276407 3276410, overlap 3276400 3276436 AGTTAAGAGCAGTGA GTTAAGAATTGCGGAAGA AAA TCATCCACAACTCTTAAC TATTAACTTTAAATC TERM 3933 3276435 - 3276407 - T 76 -8.9 -3.08642 | opp_overlap 3276402 3276400, overlap 3276410 AGAGCAGTGAGTTAA GAATTGCGGAAGA AAA TCATCCACAACTC TTAACTATTAACTTT dapB2 3277211 - 3276459 - | dihydrodipicolinate reductase TERM 3934 3277029 - 3277009 - G 73 -8.3 -3.37537 | TATTTTAAAATGGAA TCCAAAGCC TCA GGCCTTGAA AAGTCCAATATCACA TERM 3935 3277309 - 3277259 - R 78 -8.8 -3.77832 | gap 1, opp_overlap 3277267 3277268, overlap 3277267 3277268 CTTTAAATTTAATAA TTTCATAACTTCAACGTGAAAGA AATCAA TCTTTCACGTTAAAATT-TAAAA AATAATCTTCCGTTT TERM 3936 3277302 - 3277267 - R 90 -10.7 -3.39749 | opp_overlap 3277267 3277268, overlap 3277259 3277268 TTAATAATTTCATAA CTTCAACGTGAAAGA AATCAA TCTTTCACGTTAAAA TTTAAAAAATAATCT TERM 3937 3277301 - 3277268 - R 93 -12 -2.63367 | opp_overlap 3277267 3277268, overlap 3277267 3277259 TAATAATTTCATAAC TTCAACGTGAAAGA AATCAA TCTTTCACGTTAAA ATTTAAAAAATAATC TERM 3938 3277268 - 3277301 + r 78 -9.8 -2.73441 | opp_overlap 3277268 3277267 3277259, overlap 3277267 TAATAATTTCATAAC TTCAACGTGAAAGA AATCAA TCTTTCACGTTAAA ATTTAAAAAATAATC dapA4 3278237 - 3277356 - | dihydrodipicolinate synthase asd 3279279 - 3278293 - | hypothetical protein CKL_3208 3279584 - 3279853 + | small acid-soluble spore protein CKL_3209 3279990 - 3280733 + | S-adenosylmethionine-dependent methyltransferase TERM 3939 3280939 - 3280949 + G 71 -6.8 -4.08945 | opp_overlap 3280923, overlap 3280946 AACTGTGCTCCTACC GCAG CTG CTGC TTTTGGAAGAATGCT CKL_3210 3280813 - 3281712 + | Hsp33-like chaperonin dapD 3281830 - 3282546 + | hypothetical protein TERM 3940 3282578 - 3282556 - T 82 -9.2 -3.85835 | opp_overlap 3282562 3282576, overlap 3282558 AAATAAATATTTAAA CAGGGATGAA GTT TTCATCCCTT GAACCATCTTTCAAG TERM 3941 3282576 - 3282558 - T 95 -11.8 -3.4926 | opp_overlap 3282562, overlap 3282556 ATAAATATTTAAACA GGGATGAA GTT TTCATCCC TTGAACCATCTTTCA ssb2 3283343 - 3282600 - | single-strand DNA-binding protein CKL_3213 3283929 - 3283441 - | hypothetical protein CKL_3214 3284888 - 3284136 - | deacetylase TERM 3942 3284439 - 3284453 + g 74 -8.6 -3.25538 | opp_overlap 3284433 GTCATTATATGCCCC TTCAGG ACA CCTGAA TAATTTTGTTCCAGA CKL_3215 3285059 - 3285583 + | hypothetical protein TERM 3943 3285603 - 3285629 + T 71 -7.4 -3.73212 | opp_overlap 3285603 3285605, overlap 3285601 TTCAATTTATAATCA TACCTGTAGG TTCCCCT CCTATAGGTA TATATTTTTTACTTT CKL_3216 3286476 - 3285589 - | hypothetical protein TERM 3944 3286829 - 3286810 - g 90 -5.7 -5.66684 | overlap 3286811 GAAGCCATAAAAAAA CTGCAGG GTATTT CCTGCAA TGGAAAAGGTACCTC TERM 3945 3286828 - 3286811 - g 71 -7 -3.98383 | overlap 3286810 AAGCCATAAAAAAAC TGCAGG GTATTT CCTGCA ATGGAAAAGGTACCT CKL_3217 3286648 - 3286896 + | hypothetical protein TERM 3946 3286939 - 3286899 - T 83 -8.7 -4.62203 | opp_overlap 3286905 3286908, overlap 3286901 TGCAAAGAATTAAAA CATAAAGAACATATTTT TAAAGGT AAAATATGTTCTTTATC GGAACGCTGGAATTA TERM 3947 3286937 - 3286901 - T 95 -11.3 -3.90987 | opp_overlap 3286905 3286908, overlap 3286899 CAAAGAATTAAAACA TAAAGAACATATTTT TAAAGGT AAAATATGTTCTTTA TCGGAACGCTGGAAT TERM 3948 3286905 - 3286933 + T 73 -7.7 -3.86015 | opp_overlap 3286901 3286899, overlap 3286908 GAATTAAAACATAAA GAACATATTTT TAAAGGT AAAATATGTTC TTTATCGGAACGCTG folC 3288336 - 3286984 - | hypothetical protein valS 3291003 - 3288355 - | valyl-tRNA synthetase TERM 3949 3291070 - 3291044 - R 100 -12.3 -4.91511 | overlap 3291061 ATTTCATTATAAAAA GCCTCCATCCC AATAA AGGACGGAGGC CCGCGTTACCACCTT CKL_3220 3292112 - 3291330 - | transport protein CKL_3221 3292608 - 3292805 + | transcriptional regulator TERM 3950 3292807 - 3292823 + F 76 -4.4 -5.1963 | overlap 3292806 CTATATTTTTATGAT GGGCAA CCCTA TTGTCC TTTTTATTCCTTGGA TERM 3951 3292904 - 3292949 + F 75 -7.9 -3.98282 | gap 1, overlap 3292904 AACTTTACTATTTTA TGTCGTTATACGGAC-ATTTAT TTT ATATATAGTCTATATAACGACA TTTCATTGATATACG CKL_3222 3293016 - 3293372 + | transcriptional regulator TERM 3952 3293363 - 3293385 + F 88 -7.8 -4.91987 | opp_overlap 3293362 AGATGAACAGAAAGG CTCTAGCT AAAATAA AGCTAGAG TTTTATTATTCCATT CKL_3223 3293427 - 3293579 + | hypothetical protein CKL_3224 3293996 - 3293601 - | hypothetical protein CKL_3225 3294169 - 3294339 + | hypothetical protein TERM 3953 3294338 - 3294354 + T 95 -6.5 -5.71983 | CGTGGAAGAAGATTT GAGGGCT TGA GGCTCTC TTTTTTTATGATTAA TERM 3954 3294395 - 3294370 - T 90 -11.1 -3.21099 | opp_overlap 3294370 TTTTTTTATGATTAA GCCCTCCAGCT GATT AGGCGGAGGGC TTTTGTTTGTTACCA TERM 3955 3294370 - 3294395 + T 95 -9 -5.09762 | gap 1, opp_overlap 3294370 TTTTTTTATGATTAA GCCCTCCAGCT GATTA GGC-GGAGGGC TTTTGTTTGTTACCA TERM 3956 3294684 - 3294706 + T 78 -7.6 -4.43221 | TTCTAATTGGTGAAA GCCCTGGGGT TTG GTCCTGGGGC TTTTGTGGACTCTTT TERM 3957 3294893 - 3294871 - T 70 -2.9 -5.28561 | AATATATAAGAAAAA TATATATAA TATTT TCATATATA ATTACATTTTTAATG TERM 3958 3294941 - 3294965 + T 100 -10.3 -4.80729 | TTTTCTTATAGTTCA CTTATTAAAAA TTT TTTTTAATAAG TTTTATATTATGTTT CKL_3226 3296244 - 3295060 - | hypothetical protein TERM 3959 3296328 - 3296360 + r 100 -7.1 -5.60689 | TACGTTTTGTTTTAA GAAACCATTAAGATT GGT AGTCGTCATGGTTTC TTTTTTATTGTATAG TERM 3960 3296438 - 3296416 - R 82 -6.2 -5.09221 | opp_overlap 3296417, overlap 3296412 3296417 GACAATAAAAATAAA CCCTGCCAGA AAA TCCAGCAGGT TTGGAAAATGTATTT TERM 3961 3296437 - 3296417 - R 84 -9.7 -3.63092 | opp_overlap 3296417, overlap 3296416 3296412 ACAATAAAAATAAAC CCTGCCAGA AAA TCCAGCAGG TTTGGAAAATGTATT TERM 3962 3296705 - 3296676 - R 84 -10.8 -2.53015 | opp_overlap 3296681, overlap 3296681 ATATGTTTTAATCTA TAAAAGCCCTGG AGTTCA CCAGGGCTTTTG CTATGTAAAACAAAG TERM 3963 3296700 - 3296681 - R 100 -10.7 -4.4715 | opp_overlap 3296681, overlap 3296676 TTTTAATCTATAAAA GCCCTGG AGTTCA CCAGGGC TTTTGCTATGTAAAA TERM 3964 3296681 - 3296700 + r 95 -10.7 -4.39166 | opp_overlap 3296681 3296676 TTTTAATCTATAAAA GCCCTGG AGTTCA CCAGGGC TTTTGCTATGTAAAA CKL_3227 3297373 - 3296789 - | hypothetical protein CKL_3228 3297534 - 3297328 - | hypothetical protein TERM 3965 3297634 - 3297600 - R 76 -4.4 -5.24129 | gap 1, overlap 3297601 3297603 3297605 TTTTGCTATAAAAAA GTACACCCTAGGCCA AATTAA TGACCTAGGGT-TAA AATTATTGAGCTGGT TERM 3966 3297633 - 3297601 - R 73 -7.9 -3.73995 | gap 1, overlap 3297600 3297603 3297605 TTTGCTATAAAAAAG TACACCCTAGGCCA AATTAA TGACCTAGGGT-TA AAATTATTGAGCTGG TERM 3967 3297632 - 3297603 - R 75 -8.6 -3.44801 | overlap 3297601 3297600 3297605 TGCTATAAAAAAGTA CACCCTAGGCCA AATTAA TGACCTAGGGTT AAAATTATTGAGCTG TERM 3968 3297630 - 3297605 - R 93 -11.2 -3.28457 | overlap 3297603 3297601 3297600 CTATAAAAAAGTACA CCCTAGGCCA AATTAA TGACCTAGGG TTAAAATTATTGAGC CKL_3229 3298056 - 3297637 - | hypothetical protein CKL_3230 3298451 - 3298077 - | hypothetical protein TERM 3969 3298559 - 3298526 - R 83 -6.9 -4.84311 | opp_overlap 3298526 CCTTACATAAGAAAA TTCTCACTCCATC AGAGAAAA GATAGAATGAGAA TTTAAATACTACCCT CKL_3231 3298801 - 3298568 - | hypothetical protein TERM 3970 3298914 - 3298885 - R 75 -9.3 -2.60776 | opp_overlap 3298885, overlap 3298884 3298883 AATTCCTGAAAAATT CGGCATAGTCG TTGATATT CGGCTATGCCG TTTTTTCGTTTAGTT TERM 3971 3298885 - 3298914 + r 100 -11.5 -5.41359 | opp_overlap 3298885 3298884 3298883 AATTCCTGAAAAATT CGGCATAGTCG TTGATATT CGGCTATGCCG TTTTTTCGTTTAGTT CKL_3232 3300576 - 3298924 - | hypothetical protein CKL_3233 3300837 - 3300634 - | hypothetical protein CKL_3234 3301812 - 3300913 - | hypothetical protein TERM 3972 3301542 - 3301558 + g 72 -8.7 -3.02263 | ATGTATCGGCACTTT CGGGGAT TGG ATCTCCG TCTTCAACCCAATCT CKL_3235 3301953 - 3301831 - | hypothetical protein TERM 3973 3302036 - 3302022 - RH 70 -5.7 -4.33653 | opp_overlap 3302021 3302022 CAGGTAAAAACTAAA CTCTC TATAC GAGAG CGATTTTTTATATAA CKL_3236 3304395 - 3302086 - | hypothetical protein TERM 3974 3303115 - 3303103 - GH 76 -6.3 -4.62783 | overlap 3303106 CATGGATGTTAAAAA CAATG TTC CATTG GCACAGTTGAGTACC CKL_3237 3304322 - 3304642 + | hypothetical protein CKL_3238 3305036 - 3305275 + | hypothetical protein CKL_3239 3305268 - 3307238 + | Type III restriction-modification system, modification subunit TERM 3975 3307729 - 3307702 - g 72 -2.7 -5.34055 | overlap 3307705 AGAAACACCAAAAAA CAAGAAAAAGG GGCGCT CCTATTTCCCG AGTGTTGTGAGCGAC TERM 3976 3308004 - 3307982 - g 75 -4.8 -4.93877 | opp_overlap 3307987 GTTGATGAAATAAAA CCACAGTGTA TTA TACGCTTTGG TGCTACCTTCCCTGA TERM 3977 3308672 - 3308686 + G 74 -7.8 -3.90048 | overlap 3308671 CTTGCAGATATTTCT GCTTGC CAT GCAGGC TATTTTTCACAGGAC TERM 3978 3308789 - 3308762 - g 71 -2 -5.47218 | CTTCATGGAAAAAAA CATCTTCTCTCT TTCA AGAATAAAGACG GTAGCTATAACACTT CKL_3240 3307253 - 3310213 + | Type III restriction-modification system, restriction subunit TERM 3979 3311784 - 3311796 + G 71 -7.7 -3.38324 | opp_overlap 3311782 3311784, overlap 3311783 ATAGCACAACATATA GAGGA AAT TCCTC ATTTTATTAAGGATA CKL_3241 3310236 - 3311855 + | ATP-dependent endonuclease TERM 3980 3311903 - 3311871 - T 100 -11.4 -5.53288 | opp_overlap 3311871 CTGAATGTAAAAAAA GACCACACAGGAGT AAAAA ACTCTTATGTGGTC TTTTTTGCCCCGCTT TERM 3981 3311871 - 3311903 + T 100 -11.4 -5.01732 | opp_overlap 3311871 CTGAATGTAAAAAAA GACCACACAGGAGT AAAAA ACTCTTATGTGGTC TTTTTTGCCCCGCTT CKL_3242 3312231 - 3311980 - | hypothetical protein CKL_3243 3313237 - 3312317 - | glycosyl hydrolase CKL_3244 3313642 - 3313250 - | hypothetical protein TERM 3982 3313701 - 3313683 - R 82 -4.6 -5.58074 | TAAGCATTAAAAAAA GCCTTAGA CCT TCTAAAAC TCCTTATATTCTCTT TERM 3983 3313879 - 3313868 - R 86 -4.4 -5.80951 | opp_overlap 3313868 AGGTAAAATAAAAAA GCTA TCTC TAGC TCCTATTTTGCCTTG CKL_3245 3314399 - 3314055 - | hypothetical protein CKL_3246 3316100 - 3314415 - | hypothetical protein TERM 3984 3314602 - 3314581 - G 83 -8.1 -4.26871 | opp_overlap 3314581 CAAGGTATTAATAAA TTAGCACTA TAAC CAGTGCTAA TATTAGGAACTGTAA CKL_3247 3316732 - 3316112 - | hypothetical protein TERM 3985 3316354 - 3316376 + g 77 -4 -5.35459 | TTACATCACACTCGC CGCCACTGAA AGC TTCTGCGGTG TTTTTTATCATCTGT CKL_3248 3318376 - 3316736 - | hypothetical protein CKL_3249 3319507 - 3318380 - | hypothetical protein TERM 3986 3319426 - 3319395 - G 77 -4.4 -5.24531 | opp_overlap 3319396 3319425, overlap 3319396 ATGCTCCAGAAAAAA TCTCCTTCCATTGT ACTT ACATCAGAAGGAGC TTTAGAGAGCATTCT TERM 3987 3319425 - 3319396 - G 73 -7.9 -3.73995 | opp_overlap 3319396, overlap 3319395 TGCTCCAGAAAAAAT CTCCTTCCATTGT ACTT ACATCAGAAGGAG CTTTAGAGAGCATTC CKL_3250 3319970 - 3319512 - | hypothetical protein TERM 3988 3319791 - 3319778 - G 79 -8.1 -4.09864 | ACCTATCTGTTAAAA GTGCC ATCT GGCAC CACTGCGAATAAGCT CKL_3251 3320300 - 3319971 - | hypothetical protein CKL_3252 3321261 - 3320275 - | hypothetical protein CKL_3253 3322027 - 3321272 - | hypothetical protein TERM 3989 3321894 - 3321917 + g 72 -6 -4.40003 | CTTAGAGGATTCACT GGAAAGTGGA AAGT TTCACTATCC TTTGTATTTGTCAGG CKL_3254 3322821 - 3322303 - | hypothetical protein TERM 3990 3322751 - 3322783 + g 76 -8.5 -3.39841 | overlap 3322750 3322753 3322775 TGTTCAGTAAATTGG AACTGCTTCTGAGCT GGT ACTTCAGAAGCAGTC GTTTCTTTATTCACA TERM 3991 3322753 - 3322781 + g 85 -11.1 -3.25779 | overlap 3322751 3322750 3322775 TTCAGTAAATTGGAA CTGCTTCTGAGCT GGT ACTTCAGAAGCAG TCGTTTCTTTATTCA CKL_3255 3326655 - 3322828 - | hypothetical protein TERM 3992 3326740 - 3326719 - R 76 -6.6 -4.58466 | TTCATAATTAGAAAA GGCAAGAA TCAATT TCCTTGCC ATATCATTTCTTTCT CKL_3256 3327269 - 3326832 - | hypothetical protein TERM 3993 3327380 - 3327358 - R 90 -8.4 -4.79352 | opp_overlap 3327358 TCAGGCACAATAAAA GCACCTGCCA TTA CAGCAAGTGC TTGTCTAATATTCTA CKL_3257 3327607 - 3327428 - | hypothetical protein CKL_3258 3328413 - 3327607 - | hypothetical protein TERM 3994 3328492 - 3328450 - R 86 -10 -3.54424 | overlap 3328472 3328474 TTTGATTTCTTGAAA GAGACTATTCCCTATGATAT AAT ATTTCACAGAGAGCAGTCTC TGCGTAAAACGCTCG CKL_3259 3328691 - 3328539 - | hypothetical protein CKL_3260 3329826 - 3328990 - | hypothetical protein TERM 3995 3329834 - 3329890 + r 75 -7 -4.09509 | gap 1, opp_overlap 3329855 3329866, overlap 3329835 TTCTGCACTTCCCAT CTCCCCTTATTAACAAAATAT-TAATA AAAT TATAGCATATTTTGCTAATAAGGGGAA TTTATATACATTAAT TERM 3996 3329835 - 3329889 + r 84 -10.5 -3.04983 | gap 1, opp_overlap 3329855 3329866, overlap 3329834 TCTGCACTTCCCATC TCCCCTTATTAACAAAATAT-TAATA AAAT TATAGCATATTTTGCTAATAAGGGGA ATTTATATACATTAA CKL_3261 3330311 - 3329901 - | hypothetical protein CKL_3262 3331749 - 3330322 - | hypothetical protein TERM 3997 3331761 - 3331774 + r 76 -3.9 -5.4148 | overlap 3331772 CCATACTATTCTACC TTCTT TCCT AAGAA TTTTTTAATTCTTTC CKL_3263 3332062 - 3331751 - | hypothetical protein CKL_3264 3332904 - 3332089 - | hypothetical protein CKL_3265 3333131 - 3332889 - | hypothetical protein CKL_3266 3333577 - 3333152 - | hypothetical protein CKL_3267 3333983 - 3333591 - | hypothetical protein CKL_3268 3334303 - 3333983 - | hypothetical protein CKL_3269 3334539 - 3334306 - | hypothetical protein TERM 3998 3334595 - 3334573 - R 74 -6.3 -4.46652 | overlap 3334569 TAAATAAAAATTAAA GAGCAGCTC TTTTT GAACTACTC CAATTAATATACTGT CKL_3270 3335648 - 3334599 - | hypothetical protein CKL_3271 3336058 - 3335666 - | hypothetical protein CKL_3272 3336686 - 3336081 - | hypothetical protein CKL_3273 3336915 - 3336736 - | hypothetical protein TERM 3999 3336963 - 3336950 - R 81 -3.1 -5.79595 | TTGCAAAATAAAAAA GCCTT GATT AAGAC TCATGTTTTCTCAAT CKL_3274 3337240 - 3336974 - | hypothetical protein CKL_3275 3337666 - 3337250 - | hypothetical protein TERM 4000 3337716 - 3337701 - R 74 -4 -5.33331 | TAAACATAATAAAAA GCCTTA TTTC TAAGAC TTAAATCCTACTTGT CKL_3276 3337952 - 3337743 - | hypothetical protein TERM 4001 3338013 - 3337986 - R 80 -6.4 -4.84492 | opp_overlap 3337986 3338000, overlap 3337981 TTAAGCACAATAAAA GCACCTACTA TTTTCACT TAGTAAGTGC TTTTTAAATCGTAAC CKL_3277 3338319 - 3338017 - | hypothetical protein CKL_3278 3339724 - 3338309 - | hypothetical protein CKL_3279 3341250 - 3339727 - | hypothetical protein TERM 4002 3340813 - 3340835 + g 70 -6.2 -4.15748 | AGGTTGTCCAGGGTT GGCTTCTGCT CTA AGCAGTACCC TCTTTTTTACGGTAG CKL_3280 3342602 - 3341250 - | hypothetical protein CKL_3281 3343456 - 3342602 - | hypothetical protein CKL_3282 3343687 - 3343499 - | hypothetical protein CKL_3283 3344043 - 3343831 - | hypothetical protein TERM 4003 3343925 - 3343906 - G 76 -6.4 -4.55023 | opp_overlap 3343904 3343906 3343907, overlap 3343907 TTCAATATCAGAAAA GGAGAGGT ATTC ACCTCTCT CTGGTTTATCTTTAT TERM 4004 3343924 - 3343907 - G 82 -9.9 -3.32291 | opp_overlap 3343906 3343904 3343907, overlap 3343906 TCAATATCAGAAAAG GAGAGGT ATTC ACCTCTC TCTGGTTTATCTTTA TERM 4005 3343907 - 3343924 + g 81 -9.9 -3.12488 | opp_overlap 3343907 3343906, overlap 3343906 3343904 TCAATATCAGAAAAG GAGAGGT ATTC ACCTCTC TCTGGTTTATCTTTA TERM 4006 3344063 - 3344086 + H 81 -10.4 -2.71763 | overlap 3344066 3344084 TTATATCTTTTCCCT TGACACGTCT AATA AGACGTGTTA TACTATAATTGTAGG TERM 4007 3344066 - 3344083 + H 85 -9.9 -3.5026 | overlap 3344063 TATCTTTTCCCTTGA CACGTCT AATA AGACGTG TTATACTATAATTGT CKL_3284 3344113 - 3344304 + | hypothetical protein TERM 4008 3344308 - 3344287 - f 74 -8.1 -3.70102 | opp_overlap 3344287, overlap 3344285 ATTGAAAAGCAAACA GGGATTAAA TTTT CTTAATCCC TCCCTTTTCCCTTGA CKL_3285 3344359 - 3344763 + | hypothetical protein TERM 4009 3344770 - 3344795 + T 81 -8.4 -4.19817 | opp_overlap 3344770 AATAGTTGAATTTAA GAGATGTGTA AAAACC TACGCATCTC TTTTCAATAAATCAA TERM 4010 3344845 - 3344807 - T 91 -10.5 -4.15044 | opp_overlap 3344807, overlap 3344813 TCTCTTTTCAATAAA TCAAAAGTAAGCACCCA GGTGA CGAGTACTTACTTCTGA TAATATTGTTAATCA TERM 4011 3344839 - 3344813 - T 75 -5.9 -4.67942 | opp_overlap 3344807, overlap 3344807 TTCAATAAATCAAAA GTAAGCACCCA GGTGA CGAGTACTTAC TTCTGATAATATTGT TERM 4012 3345085 - 3345060 - T 72 -3.3 -5.23765 | overlap 3345052 TAAATAATACAAAAA TAAGCACCC TAAATAAC GAGTGCCTA CTTTTATAATATTAT TERM 4013 3345352 - 3345329 - T 81 -8.2 -4.2717 | ATTATTCTATGAAAA TAAGCACCAG TTTC CTAGTGCCTA CCTCTGACATACACA TERM 4014 3345387 - 3345400 + T 71 -8.1 -3.21126 | TAGTTTTATTTTATT TGCGG TTTC CCGCA TTGGTAGCTATACTT CKL_3286 3345725 - 3345441 - | hypothetical protein CKL_3287 3346200 - 3345844 - | hypothetical protein CKL_3288 3346876 - 3346421 - | hypothetical protein CKL_3289 3347159 - 3346977 - | hypothetical protein CKL_3290 3347635 - 3347156 - | hypothetical protein CKL_3291 3348122 - 3347904 - | hypothetical protein CKL_3292 3349027 - 3348119 - | hypothetical protein CKL_3293 3349393 - 3349073 - | hypothetical protein CKL_3294 3350232 - 3349399 - | DNA methylase CKL_3295 3351812 - 3350469 - | DNA helicase TERM 4015 3351671 - 3351681 + g 71 -5.4 -4.60797 | opp_overlap 3351671 3351669 CTAGAGCTTTAAATA TCAC CTT GTGA TTTTCTCTGTAAAAA CKL_3296 3352754 - 3351816 - | hypothetical protein TERM 4016 3352182 - 3352204 + g 73 -7.8 -3.69685 | overlap 3352182 TAAAGCGTTATTATC GAGAGAGAGA TCT TTTTTCTCTC TTCTCTCTCTCTTAT TERM 4017 3352353 - 3352367 + g 74 -2.1 -5.63236 | GTTTTTTGGCTCTTC CAGTA ACTCC TGCTG TTTTTCTTTTTCCCT CKL_3297 3353742 - 3352870 - | hypothetical protein CKL_3298 3354246 - 3353758 - | hypothetical protein CKL_3299 3354492 - 3354250 - | hypothetical protein TERM 4018 3354613 - 3354645 + r 70 -6.3 -4.07675 | overlap 3354614 3354617 CCTCTAATATTTGAT TTTTCCCCCATTCTG CGA TAGAATGGGGATAAG TTTAATTACTTTTGG TERM 4019 3354617 - 3354641 + r 75 -9.3 -2.72094 | overlap 3354614 3354613 TAATATTTGATTTTT CCCCCATTCTG CGA TAGAATGGGGA TAAGTTTAATTACTT TERM 4020 3354658 - 3354679 + r 82 -4.4 -5.69262 | overlap 3354659 AAGTTTAATTACTTT TGGACCCT CTGCAA AGGGTTCG TTTTTATTTTTGTGG CKL_3300 3354982 - 3354683 - | hypothetical protein CKL_3301 3355126 - 3354986 - | hypothetical protein CKL_3302 3355547 - 3355128 - | hypothetical protein CKL_3303 3355709 - 3355560 - | hypothetical protein CKL_3304 3356045 - 3355725 - | hypothetical protein CKL_3305 3356222 - 3356058 - | hypothetical protein CKL_3306 3356370 - 3356185 - | hypothetical protein CKL_3307 3356564 - 3356367 - | hypothetical protein CKL_3308 3356807 - 3356595 - | hypothetical protein CKL_3309 3357018 - 3356800 - | hypothetical protein CKL_3310 3357786 - 3357019 - | hypothetical protein CKL_3311 3358281 - 3357808 - | hypothetical protein CKL_3312 3358643 - 3358467 - | hypothetical protein CKL_3313 3358941 - 3358699 - | hypothetical protein TERM 4021 3359023 - 3359009 - H 81 -2.9 -5.85737 | opp_overlap 3359009, overlap 3359001 ATATCAATAAAAAAA TTAGA AATAA TCTAA TATTTTTATAAAGTT CKL_3314 3359091 - 3359405 + | transcriptional regulator CKL_3315 3359426 - 3359725 + | hypothetical protein CKL_3316 3360042 - 3359791 - | hypothetical protein TERM 4022 3360176 - 3360160 - H 74 -8.1 -3.695 | overlap 3360151 3360163 GTGAAATATTTTAAA TAACACA ATA TGTGTTA AAATATAATTATGAG TERM 4023 3360295 - 3360246 - g 81 -10.3 -2.88243 | gap 1, opp_overlap 3360254, overlap 3360241 3360253 TGGATAAGAACATGA CCCAACAGGAGCTTGCAAAAATTT TAA AAATTTCTTCAAGCAC-TATTGGG ATGTATGAACAGAAT CKL_3317 3360200 - 3360802 + | transcriptional regulator TERM 4024 3360834 - 3360810 - f 78 -4.3 -5.52807 | opp_overlap 3360810, overlap 3360800 AAGAATAAATAAAAA TTCTCATTCTA AAA TAGTTTGAGAA TTTTTTTTATAGAAT TERM 4025 3360810 - 3360834 + F 93 -4.3 -5.94713 | opp_overlap 3360810 3360800 AAGAATAAATAAAAA TTCTCATTCTA AAA TAGTTTGAGAA TTTTTTTTATAGAAT TERM 4026 3361273 - 3361259 - f 70 -5.8 -4.37544 | TTATAATAAGAGAAA TAGTAT AAG ATACTA TAGAAGCATTACTTC TERM 4027 3362543 - 3362522 - g 74 -3.1 -5.39721 | GTATTACAGAAAAAA CTAAATTTT TGAT AAAGTTTAG AATGGATTAAATAGA CKL_3318 3361294 - 3362553 + | two-component sensor histidine kinase TERM 4028 3362820 - 3362797 - g 100 -9 -5.48213 | TACTTAAAAGAAAAA GCTATTCTTA AATA TAAGAACAGC TCTAAAGTTGGCGAT CKL_3319 3362644 - 3362889 + | hypothetical protein TERM 4029 3362918 - 3362886 - f 91 -7.9 -5.30575 | opp_overlap 3362886 TAAAAACTCAAAAAA CTAAAATGCACCC TGCGAAT AAGTGCATTTTAG TTAATAATTAAAAAC TERM 4030 3363601 - 3363587 - g 79 -2.8 -5.88197 | opp_overlap 3363587 GTAAAGATAAAAAAA TGTTCA AGT TGAGCA TAGTTCCTGAAGAAA CKL_3320 3363058 - 3364698 + | recombinase-related protein TERM 4031 3364677 - 3364715 + F 75 -5.4 -4.94902 | overlap 3364679 3364682 GACCCCTCAGGGTAT TGTAAGAAGGCGTAAC TACTAGT GTTGTGCCTTCTTGTG TTTTTGTAGTGGTTG TERM 4032 3364679 - 3364713 + F 80 -8 -4.08644 | overlap 3364677 3364682 CCCCTCAGGGTATTG TAAGAAGGCGTAAC TACTAGT GTTGTGCCTTCTTG TGTTTTTGTAGTGGT TERM 4033 3364682 - 3364710 + F 77 -7.5 -4.1472 | overlap 3364679 3364677 CTCAGGGTATTGTAA GAAGGCGTAAC TACTAGT GTTGTGCCTTC TTGTGTTTTTGTAGT fprA 3365138 - 3366484 + | FprA TERM 4034 3366533 - 3366485 - T 85 -10.1 -3.50853 | gap 1, opp_overlap 3366480 3366495 3366499 3366502, overlap 3366487 3366489 3366491 3366495 3366502 TTTGTGGAAGTATAA TATATATCAATTAAGAACTGTA TGTGTG TACAGTTCTTAATTGAT-TAAA CACTATGGAACTTTA TERM 4035 3366531 - 3366487 - T 100 -12.7 -3.32946 | gap 1, opp_overlap 3366480 3366495 3366499 3366502, overlap 3366485 3366489 3366491 3366495 3366502 TGTGGAAGTATAATA TATATCAATTAAGAACTGTA TGTGTG TACAGTTCTTAATTGAT-TA AACACTATGGAACTT TERM 4036 3366530 - 3366489 - T 100 -13.4 -3.2302 | opp_overlap 3366480 3366495 3366499 3366502, overlap 3366487 3366485 3366491 3366495 3366502 TGGAAGTATAATATA TATCAATTAAGAACTGTA TGTGTG TACAGTTCTTAATTGATT AAACACTATGGAACT TERM 4037 3366528 - 3366491 - T 100 -16 -3.17274 | opp_overlap 3366495 3366499 3366502, overlap 3366489 3366487 3366485 3366495 3366502 GAAGTATAATATATA TCAATTAAGAACTGTA TGTGTG TACAGTTCTTAATTGA TTAAACACTATGGAA TERM 4038 3366495 - 3366524 + T 95 -11.7 -3.34522 | opp_overlap 3366491 3366489 3366487 3366485 3366495 3366502, overlap 3366499 3366502 TATAATATATATCAA TTAAGAACTGTAT GTGT GTACAGTTCTTAA TTGATTAAACACTAT TERM 4039 3366524 - 3366495 - T 90 -11 -3.38966 | opp_overlap 3366495 3366499 3366502, overlap 3366491 3366489 3366487 3366485 3366502 TATAATATATATCAA TTAAGAACTGTA TGTGTG TACAGTTCTTAA TTGATTAAACACTAT TERM 4040 3366499 - 3366520 + T 73 -8.1 -3.45366 | opp_overlap 3366495 3366491 3366489 3366487 3366485 3366502, overlap 3366495 3366502 ATATATATCAATTAA GAACTGTAT GTGT GTACAGTTC TTAATTGATTAAACA CKL_3322 3367444 - 3366536 - | hydrolase TERM 4041 3367517 - 3367542 + r 100 -13.5 -3.51032 | opp_overlap 3367517 ATTGGATTATATGAA GAGTGAAGAAA AATT TTTCTTCACTC TTATCATTAAAAGCT TERM 4042 3367542 - 3367517 - R 100 -13.5 -3.29649 | opp_overlap 3367517 ATTGGATTATATGAA GAGTGAAGAAA AATT TTTCTTCACTC TTATCATTAAAAGCT CKL_3323 3371868 - 3367573 - | activator of 2-hydroxyglutaryl-CoA dehydratase-like protein TERM 4043 3369317 - 3369331 + g 79 -7.2 -4.47158 | ATACCCTTTTTCCCC GTATCT TTA AGATAC TTTATTGTCTCTTCT TERM 4044 3370276 - 3370291 + g 80 -6.2 -4.80417 | overlap 3370279 AACTATTATTTTTTC TCCTAA ATTC TTAGGA TTTGTTATTTTTATC TERM 4045 3372037 - 3372014 - H 82 -2.5 -5.95166 | CCTAATGAAAAAAAA TAACCCTAT TCTTGT ATACGGTTA AATTATCAATACTAA CKL_3324 3372296 - 3373054 + | ABC transporter ATP-binding protein CKL_3325 3373054 - 3373857 + | ABC transporter permease TERM 4046 3373907 - 3373865 - f 88 -9.4 -4.15565 | opp_overlap 3373870 3373878, overlap 3373870 TTCATTAGTGCAAAA TTGAAGTTTTAAAGAGAGCC CAT AACTCTCTTTAAAACTTATA TACCCCATAATTTTT TERM 4047 3373870 - 3373902 + F 95 -12.3 -3.48924 | opp_overlap 3373865 3373870, overlap 3373878 TAGTGCAAAATTGAA GTTTTAAAGAGAG CCCATAA CTCTCTTTAAAAC TTATATACCCCATAA TERM 4048 3373902 - 3373870 - f 100 -13.7 -3.37537 | opp_overlap 3373870 3373878, overlap 3373865 TAGTGCAAAATTGAA GTTTTAAAGAGAGCC CAT AACTCTCTTTAAAAC TTATATACCCCATAA CKL_3326 3374053 - 3374412 + | hypothetical protein TERM 4049 3374451 - 3374431 - T 79 -6.9 -4.80959 | opp_overlap 3374433 TAACTTATAATAAAA GAGTGGT TTGATCT ACCACTC TCCTGCTATTTGCGA CKL_3327 3375618 - 3374443 - | hypothetical protein CKL_3328 3375879 - 3377057 + | hypothetical protein CKL_3329 3378103 - 3377279 - | recombination regulator RecX TERM 4050 3377611 - 3377628 + g 81 -4.1 -5.55769 | GATAATATTTCCTCT TTGCCAT GTCA AAGGCAA TTTTTTCTTCTAAAG CKL_3330 3379357 - 3378128 - | zinc protease CKL_3331 3379519 - 3381093 + | RNA helicase CKL_3332 3382799 - 3381213 - | hypothetical protein TERM 4051 3382264 - 3382241 - G 71 -8.2 -3.18383 | AGGCGCATTCAGGAA GCCATATTCC ATCT GGAACATGAC CCATGTGCTCCAGAT CKL_3333 3383354 - 3382911 - | hypothetical protein TERM 4052 3383487 - 3383475 - R 72 -3.3 -5.22312 | ATTCATATGAAAAAA GCATG TTA CAAGC AAATTCCTGGATCTA CKL_3334 3383976 - 3383500 - | hypothetical protein TERM 4053 3383688 - 3383678 - G 74 -6.8 -4.27316 | opp_overlap 3383684 3383685, overlap 3383681 3383685 TTCTTTAAGCCAAAA GGAC ATA GTCC CCCTACAGGGTGACC TERM 4054 3383692 - 3383707 + g 71 -7.6 -3.50447 | opp_overlap 3383685 3383681, overlap 3383685 3383684 AGGACATAGTCCCCC TACAGG GTGA CCTGTA TTCTCTAAAACTTCA TERM 4055 3383749 - 3383766 + g 81 -4.3 -5.5112 | overlap 3383763 CATTTTAGCTTTAGT TTTAAAA ATCT TTTTAAA TTTTTTATTGCTAAC TERM 4056 3384279 - 3384261 - R 70 -3.1 -5.25803 | AATTCGCACAAAAAA GGAGCTC TATAT AAACTCC CACAACTTATGTAGT greA2 3384790 - 3384326 - | GreA2 uppS2 3385212 - 3385856 + | UppS2 TERM 4057 3386172 - 3386137 - T 100 -15 -4.91873 | opp_overlap 3386137 GACAGTAATGAAAAA TAGATTAAAGGCCG TATTAAAG CGGCCTTTAATCTA TTTTTACATTTCAGA TERM 4058 3386137 - 3386172 + T 100 -15.7 -4.81249 | opp_overlap 3386137 GACAGTAATGAAAAA TAGATTAAAGGCCGT ATTAAA GCGGCCTTTAATCTA TTTTTACATTTCAGA CKL_3337 3389694 - 3386176 - | Automatic annotation TERM 4059 3387873 - 3387890 + g 74 -5.5 -4.87052 | TTTTCAGAGCTTCTA TGGCCCT ATCC ACGGCCA TTTTATTCATTTCTA CKL_3338 3389999 - 3390922 + | hypothetical protein TERM 4060 3391091 - 3391117 + T 70 -5.2 -4.45723 | opp_overlap 3391092, overlap 3391092 GGATAAAAATATAAA ACAGATAGGA ATTAATA TCCTATCTGC TTTTAATGTCTTGTT TERM 4061 3391116 - 3391092 - T 95 -8.7 -5.02287 | opp_overlap 3391091 3391092 GATAAAAATATAAAA CAGATAGGA ATTAATA TCCTATCTG CTTTTAATGTCTTGT TERM 4062 3391092 - 3391116 + T 74 -8.7 -3.25807 | opp_overlap 3391092, overlap 3391091 GATAAAAATATAAAA CAGATAGGA ATTAATA TCCTATCTG CTTTTAATGTCTTGT CKL_3339 3391329 - 3391132 - | hypothetical protein CKL_3340 3392511 - 3391459 - | hypothetical protein TERM 4063 3392226 - 3392213 - G 80 -5.3 -5.1523 | opp_overlap 3392213 TCTAGAACATAAAAA GTATC CTCT GATAC TTTAACAAAATTTTT CKL_3341 3393313 - 3392555 - | cobalamin synthase CKL_3342 3393525 - 3393947 + | hypothetical protein TERM 4064 3394005 - 3393970 - T 76 -8.5 -3.59262 | gap 1, opp_overlap 3393963 3393970 3393967 GTTGAGATTGCTAAA GGCAGTTAC-TGTTTT AAACG AATACAAGTAACTGCC TACCTTTATTTTAGA TERM 4065 3393970 - 3394005 + T 71 -8.5 -2.84636 | gap 1, opp_overlap 3393970, overlap 3393963 3393967 GTTGAGATTGCTAAA GGCAGTTAC-TGTTTT AAACG AATACAAGTAACTGCC TACCTTTATTTTAGA CKL_3343 3395309 - 3394083 - | hypothetical protein TERM 4066 3395090 - 3395100 + g 74 -6.8 -4.22375 | overlap 3395087 CCTCTTCTATTTTAC TGCC TAT GGCA TTATTTATATTAAGT CKL_3344 3395435 - 3396373 + | hypothetical protein TERM 4067 3396403 - 3396383 - T 100 -9.7 -5.43553 | AGGTAAAAAATAAAA GGGACCG TTTAACG CGGTCCC AAGGGGGATGGGGGG CKL_3345 3397481 - 3396519 - | transcriptional regulator CKL_3346 3397743 - 3398123 + | hypothetical protein TERM 4068 3398166 - 3398199 + T 74 -4.7 -5.18726 | opp_overlap 3398166 GAATTAAATAAAAAA TACTATCAAGATTAA TTAA TAAGTCCTGATAGTA TTTTTATTCTAACAA TERM 4069 3398199 - 3398166 - T 90 -5.6 -5.72053 | gap 1, opp_overlap 3398166 GAATTAAATAAAAAA TACTATCAAGA-TTA ATTAA TAAGTCCTGATAGTA TTTTTATTCTAACAA CKL_3347 3398958 - 3398224 - | protease TERM 4070 3398653 - 3398683 + g 71 -2 -5.37043 | overlap 3398655 TATATAAAATATAAT TGTCAAATTTAATG CCT TAATAAATTTGAAA TTTTTTATATCAAAT engB 3399596 - 3399003 - | GTPase EngB lon 3401933 - 3399609 - | hypothetical protein TERM 4071 3400494 - 3400518 + g 74 -7.9 -3.89971 | opp_overlap 3400493 3400494, overlap 3400496 CATTCTGTCAAAAAG TGGCCTAGGTA TGT TACCTATGCTA TTTGCTGTAGTTATA TERM 4072 3400496 - 3400516 + g 73 -8.3 -3.52849 | opp_overlap 3400494 3400493, overlap 3400494 TTCTGTCAAAAAGTG GCCTAGGTA TGT TACCTATGC TATTTGCTGTAGTTA TERM 4073 3402054 - 3401996 - R 90 -10.7 -3.38118 | gap 1, opp_overlap 3402002 3402003 3402016, overlap 3402003 3402016 AGAATTTACTTATAA GCAGCAACTTATTTAAAAAAGAGTACCG ACAC CAGTACTC-TTTTTAAATAAGATTATGC AGTTTCAGGACCCTT TERM 4074 3402002 - 3402048 + r 79 -9.1 -3.39668 | gap 1, opp_overlap 3401996 3402003 3402016, overlap 3402003 3402016 TACTTATAAGCAGCA ACTTATTTAAAAAAGAGTACCG ACAC CAGTACTCT-TTTTAAATAAGA TTATGCAGTTTCAGG TERM 4075 3402047 - 3402003 - R 100 -14.8 -3.30741 | gap 1, opp_overlap 3402002 3402003 3402016, overlap 3401996 3402016 ACTTATAAGCAGCAA CTTATTTAAAAAAGAGTACCG ACAC CAGTACTC-TTTTTAAATAAG ATTATGCAGTTTCAG TERM 4076 3402003 - 3402047 + r 100 -12.6 -2.6348 | gap 1, opp_overlap 3402003 3401996 3402016, overlap 3402002 3402016 ACTTATAAGCAGCAA CTTATTTAAAAAAGAGTACCG ACAC CAGTACTCT-TTTTAAATAAG ATTATGCAGTTTCAG TERM 4077 3402016 - 3402035 + r 77 -6.4 -4.67011 | opp_overlap 3402003 3401996 3402016, overlap 3402003 3402002 AACTTATTTAAAAAA GAGTACCG ACAC CAGTACTC TTTTTAAATAAGATT TERM 4078 3402035 - 3402016 - R 95 -8.6 -5.10497 | opp_overlap 3402016 3402003 3402002, overlap 3402003 3401996 AACTTATTTAAAAAA GAGTACCG ACAC CAGTACTC TTTTTAAATAAGATT clpX 3403341 - 3402049 - | ATP-dependent protease ATP-binding subunit TERM 4079 3402443 - 3402429 - G 70 -7.2 -3.58914 | CTAAAGTAACTATAA TAGGAA TTC TTCCTA CAAATTCTGGTATAA clpP 3403945 - 3403361 - | ATP-dependent Clp protease proteolytic subunit TERM 4080 3404043 - 3404076 + r 72 -6.9 -4.18303 | opp_overlap 3404045, overlap 3404045 TATCTATATATTTGA AATTAATTGCCAGAA AGCC TTCTGACAATTAATC TTTATACTTTATAAT TERM 4081 3404074 - 3404045 - R 95 -11.7 -3.65425 | opp_overlap 3404043 3404045 TCTATATATTTGAAA TTAATTGCCAGAA AGCC TTCTGACAATTAA TCTTTATACTTTATA TERM 4082 3404045 - 3404074 + r 84 -9.5 -3.67823 | opp_overlap 3404045, overlap 3404043 TCTATATATTTGAAA TTAATTGCCAGAA AGCC TTCTGACAATTAA TCTTTATACTTTATA tig 3405385 - 3404093 - | trigger factor CKL_3353 3406603 - 3405815 - | hypothetical protein CKL_3354 3407462 - 3406674 - | hypothetical protein TERM 4083 3407911 - 3407934 + r 70 -8.2 -3.04792 | gap 1 CGTAGCAGTGCTTAT CCCCCA-CTTT AAA GAAGATGGGGG TATTAGCAATGGTAG pyrE 3408598 - 3408026 - | orotate phosphoribosyltransferase pyrD2 3409499 - 3408609 - | PyrD2 pyrK 3410311 - 3409535 - | dihydroorotate dehydrogenase electron transfer subunit TERM 4084 3409976 - 3409994 + g 77 -3.1 -5.68489 | overlap 3409978 TGCAATCCCTATTCC TCCTGCT ATCAC AGCAGTA TTTTTTCTTATTATA TERM 4085 3409978 - 3409992 + g 72 -5.7 -4.45127 | overlap 3409976 CAATCCCTATTCCTC CTGCT ATCAC AGCAG TATTTTTTCTTATTA TERM 4086 3410364 - 3410382 + r 70 -7.6 -3.41798 | overlap 3410363 AGAATTCTTATTCTG TGATATTT TTA AAATATCA TCTCTTATTTTAACA pyrF 3411221 - 3410346 - | orotidine 5'-phosphate decarboxylase TERM 4087 3410694 - 3410715 + g 77 -3.1 -5.59534 | ACTCACTTTTTTTCC TACAATATT ATAT AATTTTGTA TTTTTTCTTGTGCTT pyrC 3412428 - 3411247 - | hypothetical protein TERM 4088 3412144 - 3412156 + g 73 -7.7 -3.61103 | ATCCATACTGCTGCA TACGG GGT CCGTA TTTGCCATAAGATTA pyrI 3412891 - 3412460 - | aspartate carbamoyltransferase regulatory subunit pyrB 3413825 - 3412905 - | aspartate carbamoyltransferase catalytic subunit TERM 4089 3413897 - 3413877 - H 100 -9 -5.4477 | opp_overlap 3413877 AAAGGCTTAAAAAAA TGCCTCCC TGTTT GGAAGGCA TTATTATACCATAAA CKL_3362 3414110 - 3414598 + | transcriptional regulator CKL_3363 3414755 - 3415636 + | hypothetical protein TERM 4090 3415644 - 3415661 + T 100 -11.3 -5.20606 | opp_overlap 3415641 3415646 ATTTTTAAACTACGA GAGAGGC CAAA GCCTCTC TTTTTCTTAGTCTTT CKL_3364 3415850 - 3415668 - | hypothetical protein TERM 4091 3415985 - 3416009 + r 89 -10.1 -3.76607 | opp_overlap 3415985 CAAAAAAAATAAAAA CCTTGACTTAA AGA TCAAGTCAAGG TTTACATATGTGTTA TERM 4092 3416009 - 3415985 - R 100 -12.3 -5.94743 | opp_overlap 3415985 CAAAAAAAATAAAAA CCTTGACTTAA AGA TCAAGTCAAGG TTTACATATGTGTTA CKL_3365 3416394 - 3416035 - | hypothetical protein TERM 4093 3416767 - 3416757 - g 71 -5.4 -4.55209 | opp_overlap 3416757 CACATAGGAAATAAA CCTA TTA TAGG TTGTACAGCCTGTAA CKL_3366 3416631 - 3417257 + | hypothetical protein CKL_3367 3417940 - 3417374 - | AgrB-like protein TERM 4094 3417468 - 3417458 - G 79 -6.8 -4.68994 | AGCAGTATTTAAAAA TGCC TGA GGCA AAAAATAACAGAATA TERM 4095 3417848 - 3417861 + g 77 -3.1 -5.53288 | ATCAAGAATGCACTC TAGTC CATA GGCTA TTTTTTTCAATTCCA CKL_3368 3419261 - 3417945 - | two-component sensor histidine kinase TERM 4096 3419278 - 3419321 + r 82 -2.6 -5.94214 | overlap 3419281 3419282 GTTGTCCTCCTTTGT TTCTGGAGATTCTTACAAAA TATG TTTTATAAAAATCTCCCTAA TTTTTTTATTATCTT CKL_3369 3419473 - 3419330 - | hypothetical protein TERM 4097 3419524 - 3419544 + r 76 -4.1 -5.45813 | CAATTTTAAGCAGTT TATTGTATA CAT TCTACAATA TTTTATTTTTTCCTC CKL_3370 3420056 - 3419688 - | hypothetical protein TERM 4098 3420087 - 3420062 - R 93 -9.1 -4.68705 | opp_overlap 3420062 ATAACTTCAAGAAAA GGAGATACCTT CATT AAAGTATCCCC TTTTTATATACTATA TERM 4099 3420062 - 3420087 + r 74 -4.7 -5.02502 | opp_overlap 3420062 ATAACTTCAAGAAAA GGAGATACCTT CATT AAAGTATCCCC TTTTTATATACTATA CKL_3371 3420527 - 3420159 - | hypothetical protein CKL_3372 3422008 - 3420779 - | ammonium transporter TERM 4100 3421416 - 3421446 + g 71 -5.5 -4.57569 | gap 1, opp_overlap 3421409 CCTAAACAGGTTAAT GGAAGACTGCTGGG TTTA CCTA-CATTCTTCC TTTTTCCAAGCATCA TERM 4101 3422094 - 3422042 - R 100 -9.1 -5.26158 | gap 1, opp_overlap 3422040 3422039 3422042 TAAATAAAAAATAAA GTATTATATTAAATAGTTTTTAAA GGCCTT TTAAAAAACTATTTA-TATAATAC TAATTTTTGTACAAA TERM 4102 3422042 - 3422094 + r 83 -9.8 -3.31915 | gap 1, opp_overlap 3422042, overlap 3422040 3422039 TAAATAAAAAATAAA GTATTATATTAAATAGTTTTTAAAG GCCT TTTAAAAAACTATTTA-TATAATAC TAATTTTTGTACAAA CKL_3373 3423555 - 3422308 - | permease TERM 4103 3423662 - 3423627 - H 71 -8 -3.30956 | opp_overlap 3423616 3423632, overlap 3423616 3423632 3423653 AGAATCAATTATTAA TAAAATTGAATTAT TTGAAACT ATAATTCAATTTTA TTGAAGTTAGGAGAA CKL_3374 3423684 - 3424580 + | transcriptional regulator CKL_3375 3425107 - 3424634 - | SsrA-binding protein rnr 3427283 - 3425154 - | ribonuclease R TERM 4104 3426457 - 3426470 + g 79 -6.7 -4.56597 | opp_overlap 3426456 ACTCCTAAATAGTAG CTTCC ATCA GGAAG TTTTTCCAGGGACAC TERM 4105 3427515 - 3427488 - R 100 -8.7 -5.58454 | opp_overlap 3427492 CGCATATTAAAAAAA TAAATAGAGTA TAAATC TACTCTATTTA TGTAAACCATTATTC CKL_3377 3427767 - 3427534 - | hypothetical protein CKL_3378 3429259 - 3427967 - | phosphopyruvate hydratase CKL_3379 3430888 - 3429359 - | phosphoglyceromutase TERM 4106 3430923 - 3430940 + r 71 -7.7 -3.61356 | opp_overlap 3430923 TAATAATTTACTATA GCCGCAA AATC TTGTGGC TTTAAGCTGGCTCCT CKL_3380 3431653 - 3430907 - | triosephosphate isomerase CKL_3381 3432871 - 3431675 - | phosphoglycerate kinase CKL_3382 3433999 - 3432992 - | hypothetical protein TERM 4107 3434144 - 3434097 - R 100 -17.4 -4.40605 | opp_overlap 3434100 3434102 3434105 3434110 ATTCATAAATATAAA GCATATAAGAAAATACCTGGTA AAAA TATCTGGTATTTTCTTATATGC TTAAAATTAAGTGTT TERM 4108 3434100 - 3434141 + r 100 -14.1 -2.7566 | opp_overlap 3434097, overlap 3434102 3434105 3434110 CATAAATATAAAGCA TATAAGAAAATACCTGGTA AAAA TATCTGGTATTTTCTTATA TGCTTAAAATTAAGT TERM 4109 3434102 - 3434139 + r 93 -12.3 -2.92246 | opp_overlap 3434097, overlap 3434100 3434105 3434110 TAAATATAAAGCATA TAAGAAAATACCTGGTA AAAA TATCTGGTATTTTCTTA TATGCTTAAAATTAA TERM 4110 3434105 - 3434136 + r 84 -9.6 -3.60214 | opp_overlap 3434097, overlap 3434102 3434100 3434110 ATATAAAGCATATAA GAAAATACCTGGTA AAAA TATCTGGTATTTTC TTATATGCTTAAAAT CKL_3383 3435019 - 3434180 - | hypothetical protein CKL_3384 3435541 - 3435074 - | hypothetical protein TERM 4111 3435638 - 3435690 + r 100 -15.9 -3.18655 | opp_overlap 3435642, overlap 3435638 3435640 ATAATAATACTACAG TAAAGGGCAGGTGCTATAAATTATA TAA TATAATTTATAGCACCTGCTCCAAA ATTTATTCCTATATT TERM 4112 3435638 - 3435691 + r 100 -13.5 -4.33803 | gap 1, opp_overlap 3435642, overlap 3435638 3435640 ATAATAATACTACAG TAAAGG-GCAGGTGCTATAAATTATA TAA TATAATTTATAGCACCTGCTCCAAAA TTTATTCCTATATTT TERM 4113 3435640 - 3435689 + r 100 -16.1 -2.50109 | gap 1, opp_overlap 3435642, overlap 3435638 3435638 AATAATACTACAGTA AAGG-GCAGGTGCTATAAATTATA TAA TATAATTTATAGCACCTGCTCCAA AATTTATTCCTATAT TERM 4114 3435686 - 3435642 - R 100 -23.3 -3.88731 | opp_overlap 3435640 3435638 3435638 TAATACTACAGTAAA GGGCAGGTGCTATAAATTATA TAA TATAATTTATAGCACCTGCTC CAAAATTTATTCCTA CKL_3385 3436668 - 3435658 - | hypothetical protein CKL_3386 3437633 - 3436905 - | hypothetical protein CKL_3387 3438054 - 3437782 - | hypothetical protein CKL_3388 3438246 - 3438827 + | hypothetical protein CKL_3389 3439737 - 3438850 - | hypothetical protein TERM 4115 3440028 - 3440007 - R 100 -6.7 -5.60993 | opp_overlap 3440007 CTTCGGATAAAAAAA GAACTTATA TTTC TATAAGCTC TCTATATGATAAATT CKL_3390 3440488 - 3440090 - | hypothetical protein TERM 4116 3440511 - 3440525 + r 72 -5.8 -4.49673 | opp_overlap 3440511, overlap 3440508 CCCTCCTCATTAAAA TTTATC CTT GATAAA TTATTTCTTTTATAT TERM 4117 3440714 - 3440671 - R 82 -6.4 -5.00884 | gap 1, opp_overlap 3440671 ATTTTCGTTAAAAAA TACACATATTTTAATGCAATA ATT TCTT-CATCAAAACATGTGTA TTTAATAAATGCTGC CKL_3391 3443233 - 3440741 - | hypothetical protein CKL_3392 3443911 - 3443246 - | hypothetical protein TERM 4118 3443474 - 3443488 + g 79 -10 -2.95204 | overlap 3443473 AGCTACCCGCTGCTG CTGTCC ACC GGACAG ATTGTTTGGCAGTAC TERM 4119 3444066 - 3444050 - R 100 -8.7 -5.93252 | opp_overlap 3444049 TGTAAAAAGAAAAAA GCAGCTC TTA AAGCTGC CCTTCATTAGGAAGA CKL_3393 3445097 - 3444057 - | hypothetical protein CKL_3394 3445771 - 3445091 - | hypothetical protein TERM 4120 3445557 - 3445567 + g 87 -5.4 -5.55855 | opp_overlap 3445555 3445557 AATATTACAGGAACA TCTC TCC GAGA TTTTATTTTTTTGCA CKL_3395 3446316 - 3447494 + | hypothetical protein TERM 4121 3447624 - 3447647 + T 83 -8.4 -4.35644 | opp_overlap 3447628, overlap 3447616 3447628 CATATAGTTAGTCTC TAAATTAGTA TGTA TACTAATTTA TTGTTTTATACTCCT TERM 4122 3447628 - 3447643 + T 70 -4.8 -4.72617 | opp_overlap 3447628, overlap 3447624 TAGTTAGTCTCTAAA TTAGTA TGTA TACTAA TTTATTGTTTTATAC CKL_3396 3447824 - 3447663 - | hypothetical protein TERM 4123 3447867 - 3447909 + H 100 -16.9 -2.71483 | opp_overlap 3447867 3447876 3447891, overlap 3447876 GGTTTTCTTTGTAAA TTTCAATAATTATTTATTG AAAAA CAATAAATAATTATTGAAA TCATTGAGAGGATGT TERM 4124 3447909 - 3447867 - H 100 -16.9 -3.53012 | opp_overlap 3447867 3447876, overlap 3447876 3447891 GGTTTTCTTTGTAAA TTTCAATAATTATTTATTG AAAAA CAATAAATAATTATTGAAA TCATTGAGAGGATGT TERM 4125 3447900 - 3447876 - H 71 -7.4 -3.70919 | opp_overlap 3447867 3447876, overlap 3447867 3447891 TGTAAATTTCAATAA TTATTTATTG AAAAA CAATAAATAA TTATTGAAATCATTG TERM 4126 3447906 - 3447891 - H 70 -4.8 -4.67353 | opp_overlap 3447876 3447867, overlap 3447876 3447867 TTATTTATTGAAAAA CAATAA ATAA TTATTG AAATCATTGAGAGGA TERM 4127 3448341 - 3448314 - g 80 -6.4 -4.77896 | TAATCAACTTAAAAA CTTCAGATTAAT AGAA ATAAATCCGAAG GGCATACACACAGAT CKL_3397 3447967 - 3448461 + | hypothetical protein CKL_3398 3448481 - 3448687 + | hypothetical protein CKL_3399 3448702 - 3450183 + | hypothetical protein TERM 4128 3450171 - 3450191 + F 100 -6.1 -5.80248 | opp_overlap 3450171 TAGAAAATTATTAAA CCAGGGT AGCTAAA GCCCTGG TTTTTTTATATATTA CKL_3400 3450368 - 3450640 + | hypothetical protein CKL_3401 3451091 - 3450648 - | hypothetical protein TERM 4129 3451214 - 3451182 - H 70 -8.1 -3.13082 | opp_overlap 3451188 3451191, overlap 3451180 3451191 TTAAATATATATATA TATTAATAATTTATA AAC TATAAATAATTAATA CACCAACTAGTATAT TERM 4130 3451262 - 3451232 - H 78 -9.8 -2.68487 | overlap 3451234 3451236 CCAACTAGTATATCA CAGACCCTTTTCAA TAT CTATAAAGGGTCTG AAGTGTATTTATACA CKL_3402 3451317 - 3452585 + | hypothetical protein TERM 4131 3452605 - 3452633 + F 74 -6.9 -4.43669 | gap 1, opp_overlap 3452605, overlap 3452600 TTATACTATGAAAAA CTGGGAATTAGA TTAAAT TCTA-TTCCCAG TTTAATTTTTTACAT TERM 4132 3452633 - 3452605 - f 79 -6.9 -4.79223 | gap 1, opp_overlap 3452600 3452605 TTATACTATGAAAAA CTGGGAATTAGA TTAAAT TCTA-TTCCCAG TTTAATTTTTTACAT CKL_3403 3452750 - 3453325 + | hypothetical protein TERM 4133 3453329 - 3453372 + T 81 -8.4 -4.15006 | gap 1, opp_overlap 3453327 3453329 AGTATATTTTAAAGA TAGCAGAGGGTAAATAT-TGA AAA TCAAATTTTTACTCCCTGCTA TTTTAAAATCCCTAT TERM 4134 3453372 - 3453329 - T 75 -8.4 -3.40112 | gap 1, opp_overlap 3453329, overlap 3453327 AGTATATTTTAAAGA TAGCAGAGGGTAAATAT-TGA AAA TCAAATTTTTACTCCCTGCTA TTTTAAAATCCCTAT CKL_3404 3454779 - 3453415 - | hypothetical protein TERM 4135 3455143 - 3455103 - R 100 -13.5 -4.96468 | TAAAGGTAAATAAAA TAAGGTTCAGATAGAGTAT GAC AAACTCCACCTGAACCCTA AAATCATTTGATTCC CKL_3405 3455729 - 3455292 - | hypothetical protein TERM 4136 3455506 - 3455525 + g 72 -5.8 -4.46514 | gap 1, opp_overlap 3455505, overlap 3455509 AAAGATTCAATACAG GCATTATCC CAT GGATAA-GC TTTCTTTGAATAACT CKL_3406 3456810 - 3455854 - | hypothetical protein TERM 4137 3457290 - 3457265 - R 79 -3.3 -5.58522 | TATACAAAATAAAAA CCTCGTGAAGT GTTG AATTCACAAAG TTTTATGGTGCGGAT CKL_3408 3458647 - 3457490 - | hypothetical protein CKL_3409 3458829 - 3460061 + | competence damage-inducible protein A TERM 4138 3460079 - 3460127 + T 100 -11.4 -4.53036 | opp_overlap 3460067 3460091, overlap 3460091 ATATTTCAGATTTTA GGCATCTGAAAATAAATAATAG AAACC CGATTATTTATTTTTAGATACC TTTTCATATTTCTCA CKL_3410 3460768 - 3460109 - | hypothetical protein CKL_3411 3461484 - 3460765 - | hypothetical protein TERM 4139 3461633 - 3461598 - R 75 -5.6 -4.64144 | opp_overlap 3461602 3461607, overlap 3461585 3461602 3461607 AATAATTTTTAAAAA TTAAGAAAAGACAATA ATGC CATTGTCTTTTCTGTA TCTATGGAATTATAA TERM 4140 3461602 - 3461629 + r 81 -10.1 -3.05765 | opp_overlap 3461598 3461602 3461607, overlap 3461607 ATTTTTAAAAATTAA GAAAAGACAAT AATGCC ATTGTCTTTTC TGTATCTATGGAATT TERM 4141 3461629 - 3461602 - R 93 -10.8 -3.81256 | opp_overlap 3461602 3461607, overlap 3461598 3461607 ATTTTTAAAAATTAA GAAAAGACAATA ATGC CATTGTCTTTTC TGTATCTATGGAATT TERM 4142 3461624 - 3461607 - R 72 -4.9 -4.93177 | opp_overlap 3461607 3461602, overlap 3461602 3461598 TAAAAATTAAGAAAA GACAATA ATGC CATTGTC TTTTCTGTATCTATG CKL_3412 3462312 - 3461656 - | hypothetical protein CKL_3413 3463216 - 3462305 - | hypothetical protein TERM 4143 3463323 - 3463290 - R 87 -4.7 -5.86332 | opp_overlap 3463319, overlap 3463319 TCAACGTAAAAAAAA CTCCCTCTCTATA CTTTACTT TATAGAGACGAAG TACTACTCCGTGGTT CKL_3414 3464607 - 3463780 - | hypothetical protein TERM 4144 3464698 - 3464711 + H 78 -2.5 -5.83211 | TATATTATATTATCA TTATA TTAT TATAA TTTTTTATTTTAGTA TERM 4145 3465740 - 3465724 - g 70 -7.3 -3.74516 | CAAATGAATATAGAA CCCAATC TAC AATTGGG ACAAACCTCTATAAT TERM 4146 3465797 - 3465783 - g 70 -7.2 -3.73859 | TATGATAATAGACAA TCTGTT TTA AACAGA GCTATTGAACTTCAC CKL_3415 3464817 - 3466181 + | hypothetical protein TERM 4147 3466217 - 3466242 + T 95 -7.6 -5.38549 | AATTGGATTTTCATA CTGCTGACAG TTACAT TTGTCAGCGG TTTTTGTTCTTTACA TERM 4148 3466298 - 3466265 - T 73 -5.3 -4.77173 | opp_overlap 3466268, overlap 3466266 3466268 TCTTTACAAAATAAA TTAGCCCATATGTCT TTTA AAACACATGGGCTTG TAATCAATCATTAAA TERM 4149 3466297 - 3466266 - T 75 -8.8 -3.45581 | opp_overlap 3466268, overlap 3466265 3466268 CTTTACAAAATAAAT TAGCCCATATGTCT TTTA AAACACATGGGCTT GTAATCAATCATTAA TERM 4150 3466295 - 3466268 - T 93 -11.4 -3.28878 | opp_overlap 3466268, overlap 3466266 3466265 TTACAAAATAAATTA GCCCATATGTCT TTTA AAACACATGGGC TTGTAATCAATCATT CKL_3416 3466941 - 3466471 - | hypothetical protein CKL_3417 3467329 - 3466952 - | hypothetical protein TERM 4151 3467190 - 3467206 + g 76 -3.7 -5.43414 | overlap 3467174 3467191 TTGCCATAATCAATG GTAGGAT TTA ATCCTAG TTTTTTATATATAAT TERM 4152 3467191 - 3467205 + g 72 -7.2 -3.84422 | overlap 3467174 3467190 TGCCATAATCAATGG TAGGAT TTA ATCCTA GTTTTTTATATATAA TERM 4153 3467581 - 3467620 + r 72 -5.8 -4.57073 | opp_overlap 3467585 3467591 3467594, overlap 3467583 3467591 ACATATTCCATGCCA CATAGTGAAAGAACCTGG ATAC CCAAGTTCTTTTACCATA TTTTTAAGAGGAGTA TERM 4154 3467583 - 3467618 + r 80 -8.4 -3.90048 | opp_overlap 3467585 3467591 3467594, overlap 3467581 3467591 ATATTCCATGCCACA TAGTGAAAGAACCTGG ATAC CCAAGTTCTTTTACCA TATTTTTAAGAGGAG TERM 4155 3467616 - 3467585 - R 86 -11 -2.89683 | opp_overlap 3467583 3467581 3467591, overlap 3467591 3467594 ATTCCATGCCACATA GTGAAAGAACCTGG ATAC CCAAGTTCTTTTAC CATATTTTTAAGAGG TERM 4156 3467591 - 3467610 + r 70 -6.4 -4.24338 | opp_overlap 3467585 3467591 3467594, overlap 3467583 3467581 TGCCACATAGTGAAA GAACCTGG ATAC CCAAGTTC TTTTACCATATTTTT TERM 4157 3467610 - 3467591 - R 78 -8.6 -3.74077 | opp_overlap 3467591 3467583 3467581, overlap 3467585 3467594 TGCCACATAGTGAAA GAACCTGG ATAC CCAAGTTC TTTTACCATATTTTT CKL_3418 3468228 - 3467680 - | hypothetical protein TERM 4158 3467785 - 3467803 + g 77 -9 -3.26237 | overlap 3467784 ATCATAGTTTAATTG TTTAGCAA GAG TTGCTAAA TCCTTTTTCCCCTTA CKL_3419 3469318 - 3468332 - | hypothetical protein CKL_3420 3469955 - 3469509 - | hypothetical protein TERM 4159 3470624 - 3470598 - g 72 -7.4 -3.91908 | opp_overlap 3470586, overlap 3470586 3470596 ATATGGCCAAAAAGA GGTAACCCAT TTTGGGC ATGGATTACC CATGTAGACAGAAAC CKL_3421 3470292 - 3470726 + | hypothetical protein TERM 4160 3470732 - 3470751 + T 84 -9.3 -3.55524 | opp_overlap 3470730 ATGTCAATAATCATT CAGGGAC GCTTCA GTCCCTG TTAATTTCCCTGCTT CKL_3422 3471507 - 3470872 - | hypothetical protein TERM 4161 3471135 - 3471146 + g 71 -2.2 -5.47218 | TTCTTATCATCCATA CAGG CTTA TCTG TTTTTTTCACTAGGC CKL_3423 3472389 - 3471727 - | hypothetical protein TERM 4162 3472489 - 3472445 - R 100 -18.5 -2.84999 | opp_overlap 3472452, overlap 3472452 ATGAAATTTATTATA TTTAAAATTTTTCAACATAAA TCA TTTATGCTGAAAAATTTTAAA TACATAAGTAACATT TERM 4163 3472452 - 3472482 + r 91 -10 -4.19817 | opp_overlap 3472445 3472452 TTATTATATTTAAAA TTTTTCAACATAAA TCA TTTATGCTGAAAAA TTTTAAATACATAAG TERM 4164 3472482 - 3472452 - R 100 -12.2 -4.24948 | opp_overlap 3472452, overlap 3472445 TTATTATATTTAAAA TTTTTCAACATAAA TCA TTTATGCTGAAAAA TTTTAAATACATAAG CKL_3424 3473613 - 3472705 - | transport protein TERM 4165 3473284 - 3473296 + g 74 -7.7 -3.82208 | opp_overlap 3473282 GTACTGAAGTATAGT TGCTG TAG CAGCA TTTGAATATTTAATA TERM 4166 3473845 - 3473855 + H 75 -5.4 -4.8622 | opp_overlap 3473845 TTATACCTATAATTA CCAA GTT TTGG TTTTTGATTCACAGG CKL_3425 3473967 - 3475139 + | iron containing alcohol dehydrogenase TERM 4167 3475195 - 3475181 - T 74 -4.2 -5.19328 | opp_overlap 3475167 3475175 3475181, overlap 3475167 ACCCTATAAGAAAAA GGGC GTTTTTA GCCC TAATTCTTTTACCTT cbiO 3476052 - 3475219 - | hypothetical protein cbiQ 3476837 - 3476049 - | hypothetical protein cbiN 3477151 - 3476834 - | cobalt transport protein CbiN cbiM 3477896 - 3477156 - | cobalt transport protein CbiM TERM 4168 3479123 - 3479111 - g 75 -4.9 -4.98672 | CCTAAAAATATAAAA TTTCT TGC AGAAA AAATTGAAACAATTG CKL_3430 3478622 - 3479839 + | signal transduction protein CKL_3431 3480035 - 3481078 + | methyl-accepting chemotaxis protein TERM 4169 3481198 - 3481179 - T 100 -9.3 -5.04987 | opp_overlap 3481179 AATAGCTTTAAAAAA GGAGCTC TGCTTT GAGCTCC TATAATTCAATCTTC TERM 4170 3481179 - 3481198 + T 77 -9.3 -2.93878 | opp_overlap 3481179 AATAGCTTTAAAAAA GGAGCTC TGCTTT GAGCTCC TATAATTCAATCTTC sodA 3482073 - 3481480 - | hypothetical protein TERM 4171 3482237 - 3482261 + r 100 -13 -4.28188 | opp_overlap 3482237 GAATATATATCAAAA CTCCAGCTTA AAATC TAAGCTGGAG TTTCTATTATCAATA TERM 4172 3482261 - 3482237 - R 100 -13.7 -4.4296 | opp_overlap 3482237 GAATATATATCAAAA CTCCAGCTTAA AAT CTAAGCTGGAG TTTCTATTATCAATA TERM 4173 3482265 - 3482280 + r 72 -4.8 -4.98436 | TCTAAGCTGGAGTTT CTATTA TCAA TAATAG TTTTTATGATCTTCC CKL_3433 3482523 - 3482326 - | hypothetical protein CKL_3434 3483136 - 3482681 - | hypothetical protein CKL_3435 3484973 - 3483264 - | methyl-accepting chemotaxis protein TERM 4174 3485225 - 3485189 - R 100 -11.1 -4.68593 | opp_overlap 3485189 3485182, overlap 3485195 TTTAGTACTTAAAAA TTAAAACTCCAACTTAA AAT CCAAGCTGGAGTCTTAA TTATTAATAATGTTT TERM 4175 3485219 - 3485195 - R 83 -7.9 -4.78661 | opp_overlap 3485189 3485182, overlap 3485189 ACTTAAAAATTAAAA CTCCAACTTAA AAT CCAAGCTGGAG TCTTAATTATTAATA dhaT2 3486399 - 3485254 - | DhaT2 CKL_3437 3488387 - 3486420 - | enoate reductase TERM 4176 3488538 - 3488519 - R 87 -5 -5.9218 | opp_overlap 3488519 TATATAATAAAAAAA CTTGTGAT TTTA AACACAAG TTTTCCATTAATTAT TERM 4177 3488636 - 3488605 - R 78 -9.1 -3.24662 | opp_overlap 3488609 3488622 3488629, overlap 3488600 3488609 3488619 ACAAAATACATTTAA TTAATATAATACA TTTAGT TGTATTATATTAA TACAACTTTTAATAT TERM 4178 3488622 - 3488642 + r 91 -9.9 -4.4296 | opp_overlap 3488609 3488605 3488600 3488619, overlap 3488609 3488629 AATATAATACATTTA GTTGTATTA TAT TAATACAAC TTTTAATATATATTG TERM 4179 3488664 - 3488680 + r 71 -4.5 -4.88228 | overlap 3488668 TATATATTGGCATGA TGTATTA ATA TGATACA TTTTTCATATTAAGT CKL_3438 3490733 - 3488754 - | signal transduction and transcriptional regulator protein TERM 4180 3490819 - 3490780 - R 80 -3.8 -5.58179 | overlap 3490784 TACCACAATAAAAAA TTCACAATGCCATAGTTT TCTC AAAGTATAACATTGCAAA TTTTTTATGTCAATT dinB 3492109 - 3490907 - | DinB TERM 4181 3490946 - 3490960 + g 77 -4.3 -5.13473 | TGATCCTGACTTAAT TATGG AATCA CCATA TTTTTTACGTATGCT TERM 4182 3492009 - 3492025 + g 75 -8 -3.6003 | CGATTCTTGGGATCC CCTGCT ACAGC AGCAGG TTTGCCAATAATTTC CKL_3440 3492523 - 3492699 + | hypothetical protein TERM 4183 3492699 - 3492714 + F 89 -7.6 -5.18357 | TATATTATTTCTATA GAACCT TAGC AGGTTC TTTTTTCATGGATTC CKL_3441 3492985 - 3493836 + | methyl-accepting chemotaxis protein TERM 4184 3494340 - 3494309 - g 88 -6.1 -5.32565 | CAATGAAGTAAAAAA TTTG-GCAGAACTCT CAAA AGAGT-CTGCACAAA AAATAAATAATTTAA CKL_3442 3494031 - 3494732 + | methyl-accepting chemotaxis protein TERM 4185 3494820 - 3494803 - f 85 -7 -4.89852 | GTATATGCATAAAAA GAGAGG TATTCG CCTCTC CCCTATTTATCTCTA TERM 4186 3495003 - 3494965 - f 81 -8.4 -4.1466 | opp_overlap 3494965 3494964 3494996 ATTGAACCTTCAAAA TGAAAATGAGCACCTA ATAATGA TAAGTGCTTATTTTCA ATATTCTTTTATTTT TERM 4187 3494965 - 3495003 + F 71 -8.4 -2.91671 | opp_overlap 3494965, overlap 3494964 3494996 ATTGAACCTTCAAAA TGAAAATGAGCACCTA ATAATGA TAAGTGCTTATTTTCA ATATTCTTTTATTTT TERM 4188 3495215 - 3495192 - f 73 -4.6 -5.186 | opp_overlap 3495192 3495182 3495195, overlap 3495184 3495182 TAAAAGATATAAAAA TAAGCACC TAAATGAC GGTGCCTA TTTTTAATAACATTA TERM 4189 3496206 - 3496192 - f 100 -6.4 -5.79595 | opp_overlap 3496192 3496204 GGGTAAAATAAAAAA CACCGA AAT TCAGTG TTATCAATACTTTAT TERM 4190 3497430 - 3497406 - g 84 -2.1 -6.12458 | opp_overlap 3497409, overlap 3497408 CAAAAAAAGAAAAAA CATTATCGGTT GAT AACCAGTATTG GGTTGATAAGGGCTG CKL_3443 3496763 - 3497458 + | hypothetical protein CKL_3444 3497610 - 3497846 + | transposase CKL_3445 3497888 - 3498688 + | transposase TERM 4191 3498721 - 3498694 - f 100 -13.6 -4.56367 | TATTGCATAAACAAA TTGCGTACCAGT AAAA ACTGATACGCAA TAAAGTCTAACTTTA CKL_3446 3498880 - 3499266 + | hypothetical protein TERM 4192 3499324 - 3499355 + T 71 -7.3 -3.87538 | opp_overlap 3499326, overlap 3499326 ACATCAAAATTTAAA AAGCCTAGTAGGA TCTTTT TCCCACTAGGCTC TTATTATCATACTTT TERM 4193 3499326 - 3499353 + T 85 -9.9 -3.5121 | opp_overlap 3499326, overlap 3499324 ATCAAAATTTAAAAA GCCTAGTAGGA TCTTTT TCCCACTAGGC TCTTATTATCATACT TERM 4194 3499353 - 3499326 - T 100 -12.1 -4.88222 | opp_overlap 3499326 3499324 ATCAAAATTTAAAAA GCCTAGTAGGA TCTTTT TCCCACTAGGC TCTTATTATCATACT CKL_3447 3499566 - 3499369 - | small acid-soluble spore protein TERM 4195 3499832 - 3499864 + r 84 -5.7 -5.20222 | opp_overlap 3499835 3499838, overlap 3499835 AAAGAACCTATATAT GAACAAGTGACTTCT CCC AAAAGTTACTTGTTA TTTTCTTTCTTTAGT TERM 4196 3499835 - 3499861 + r 81 -7.4 -4.64595 | opp_overlap 3499835 3499838, overlap 3499832 GAACCTATATATGAA CAAGTGACTTCT CCC AAAAGTTACTTG TTATTTTCTTTCTTT CKL_3448 3500049 - 3499855 - | hypothetical protein CKL_3449 3500814 - 3500458 - | hypothetical protein TERM 4197 3500736 - 3500752 + g 93 -6.5 -5.55664 | TGCCATTCGTCACCT GAGTGCA TAA TGCTCTC TTTTTTTCCTCATAA TERM 4198 3500923 - 3500907 - R 75 -5.3 -4.87786 | opp_overlap 3500907, overlap 3500912 TTAACCTTATAAAAA TAAAATA TAC TATTTTA TAATATATGTAAATA TERM 4199 3500930 - 3500912 - R 74 -4 -5.35224 | opp_overlap 3500907, overlap 3500907 CTTATAAAAATAAAA TATACTAT TTT ATAATATA TGTAAATAAATTTAA TERM 4200 3501045 - 3501066 + r 87 -9.4 -3.95153 | opp_overlap 3501045 TTCTAATTGGTGAAA GCCCTAGG ATTACC CCTGGGGC TTTCTAAATCCTTAA TERM 4201 3501066 - 3501045 - R 71 -7.9 -3.57561 | opp_overlap 3501045 TTCTAATTGGTGAAA GCCCTAGGA TTAC CCCTGGGGC TTTCTAAATCCTTAA CKL_3450 3501417 - 3501136 - | hypothetical protein CKL_3462 3503557 - 3503087 - | phosphoesterase CKL_3463 3504168 - 3503560 - | putative deoxyribonucleotide triphosphate pyrophosphatase TERM 4202 3503704 - 3503692 - G 74 -6.3 -4.38141 | opp_overlap 3503691 3503702 CGGTATATAAAATAA TGGAT CAT ATCCA AATCTATTGGTTCCT rpH 3504914 - 3504168 - | RpH hypE 3505949 - 3504960 - | hypothetical protein CKL_3466 3506043 - 3507452 + | hypothetical protein CKL_3467 3507616 - 3507774 + | hypothetical protein TERM 4203 3507848 - 3507895 + T 84 -9.3 -3.65201 | ATCAAGTGATTCTTG GGTTCAGATGGAGTTTGATAT AGGGAA ATACTTATCTCCATCTGAACC TTATTAACAGTATTC oppA2 3509689 - 3508073 - | hypothetical protein TERM 4204 3508918 - 3508935 + g 79 -7 -4.58283 | AATTGTCAAATCCCG CCAGTG CACTTT CACTGG TTTTTAAAGAAGTTA CKL_3469 3509861 - 3510085 + | hypothetical protein gatB 3511670 - 3510240 - | aspartyl/glutamyl-tRNA amidotransferase subunit B gatA 3513135 - 3511660 - | hypothetical protein gatC 3513486 - 3513199 - | aspartyl/glutamyl-tRNA amidotransferase subunit C TERM 4205 3513730 - 3513703 - R 91 -7.1 -5.24129 | opp_overlap 3513704, overlap 3513704 CCTTCGGATAAAAAA TGAGACAATCT TTCTTT AGATTGTCTCT TAGTTTTAGTAAACT TERM 4206 3513704 - 3513729 + r 90 -10.6 -3.71672 | opp_overlap 3513703 3513704 CTTCGGATAAAAAAT GAGACAATCT TTCTTT AGATTGTCTC TTAGTTTTAGTAAAC TERM 4207 3513729 - 3513704 - R 90 -10.6 -3.73995 | opp_overlap 3513704, overlap 3513703 CTTCGGATAAAAAAT GAGACAATCT TTCTTT AGATTGTCTC TTAGTTTTAGTAAAC CKL_3473 3514005 - 3513736 - | hypothetical protein TERM 4208 3514261 - 3514250 - R 70 -3 -5.28755 | AAATATATTAAAAAA TTGT TTTG ACAA AAAAGCGCACTTTAT CKL_3474 3515541 - 3514333 - | hypothetical protein TERM 4209 3515274 - 3515299 + g 70 -6.3 -4.24075 | opp_overlap 3515272 3515274 TCATTGCTGATAATA TATAGATTAAG GTTT CTTTATCTATA TTTCTATTCATGAAT CKL_3475 3517041 - 3515653 - | hypothetical protein CKL_3476 3517998 - 3517105 - | hypothetical protein CKL_3477 3518573 - 3518040 - | hypothetical protein CKL_3478 3519246 - 3518524 - | hypothetical protein CKL_3479 3520966 - 3519278 - | protein kinase TERM 4210 3520667 - 3520684 + g 72 -3.5 -5.2166 | gap 1, opp_overlap 3520667, overlap 3520678 TGAAAAAGAAAAAGG CTTCACAG AAT CT-TGAAG TTTTTTAAGTTCTTC CKL_3480 3521418 - 3521080 - | hypothetical protein CKL_3481 3522226 - 3521648 - | transcriptional regulator TERM 4211 3522396 - 3522380 - R 75 -7.3 -4.09243 | opp_overlap 3522375 3522380 TAGATTTGGGGAAAA GGTCAAA CAT CTTGACC TTTTGTTTAAAAGCC TERM 4212 3522380 - 3522396 + r 83 -6.6 -4.86731 | opp_overlap 3522380, overlap 3522375 TAGATTTGGGGAAAA GGTCAA ACATC TTGACC TTTTGTTTAAAAGCC ligA1 3524436 - 3522445 - | LigA1 TERM 4213 3524258 - 3524279 + g 72 -5.9 -4.51378 | ACTGTACCGCCAACC TTCTGAGTT GGTG AACTCTGAA TTTTATACTCTGGAT CKL_3483 3524618 - 3524436 - | DNA ligase TERM 4214 3524673 - 3524687 + r 70 -5.8 -4.37886 | ACTAAATTAAAGTTC TATACA TTC TGTATA TTTTATACCGCCTCC pcrA 3526927 - 3524690 - | PcrA TERM 4215 3525194 - 3525206 + g 70 -6.3 -4.27316 | TAAGGACTGTATTCC TGGAA ATA TTCCA TTTTCCATTCCAACC TERM 4216 3527106 - 3527085 - R 84 -5.9 -5.24129 | opp_overlap 3527085 TTTGGTCATAAAAAA TGTGCTGAC ATTT ATCAACACA TTTAAAATTAAATAT CKL_3485 3527416 - 3527114 - | hypothetical protein TERM 4217 3527630 - 3527608 - R 100 -5.6 -6.04324 | opp_overlap 3527608 TTAAAAAATAAAAAA CAGCCCAT TTGGGGT ATAGGCTG TTTAGTAATAAATAA rsuA 3528517 - 3527801 - | hypothetical protein TERM 4218 3528583 - 3528560 - R 71 -8.2 -3.21994 | overlap 3528558 3528553 TAAAAACAGCTAATA CTCCCATCCT CTTC AAAATGGGAG ATAAACACTGCTGCG TERM 4219 3528633 - 3528663 + r 83 -9.8 -3.15574 | opp_overlap 3528632 3528629 3528633 3528636, overlap 3528632 CTAAAGGATAACAAC GTATTCTAAGTGCT AAA GGCACTAAGAATGC TGTTAATAAGGTTCA CKL_3487 3529407 - 3528721 - | transglycosylase CKL_3488 3531484 - 3529478 - | hypothetical protein TERM 4220 3532506 - 3532488 - g 95 -11.8 -3.59024 | TGATAAAGATTATAA TTGGGGAT ATG ATCCCCAA AATTACAATGTTCCT CKL_3489 3531622 - 3533736 + | pullulanase-related protein CKL_3490 3534202 - 3533744 - | hypothetical protein TERM 4221 3534506 - 3534470 - R 88 -9 -4.48072 | opp_overlap 3534470, overlap 3534475 AGACTTAGGATAAAA TAAAACTCCACAATAG ACATG CTATCATAGAGTTTTA CTGTATTATATCCAA TERM 4222 3534501 - 3534475 - R 76 -4.5 -5.20781 | opp_overlap 3534470, overlap 3534470 TAGGATAAAATAAAA CTCCACAATAG ACATG CTATCATAGAG TTTTACTGTATTATA pgi 3535889 - 3534540 - | Pgi TERM 4223 3535270 - 3535294 + g 79 -8.7 -3.85539 | ACAGAATACCTTCCT CCTATATTATC TGG GATAACATAGG TTTCATATCCCTCTA CKL_3492 3536372 - 3536977 + | hypothetical protein TERM 4224 3537009 - 3537047 + T 70 -7.7 -3.44158 | opp_overlap 3537002 3537016, overlap 3537044 AAGATATATTAGAGT CAAAAAACAGTACAG GCTTTAAAA CTATACTGTTTTTTG ATTTTTAATCCAATT TERM 4225 3537040 - 3537016 - T 73 -4.3 -5.13473 | opp_overlap 3537009, overlap 3537002 ATTAGAGTCAAAAAA CAGTACAGGCT TTA AAACTATACTG TTTTTTGATTTTTAA glgD 3538204 - 3537092 - | GlgD glgC 3539405 - 3538254 - | glucose-1-phosphate adenylyltransferase apu 3541236 - 3539446 - | Apu TERM 4226 3541164 - 3541189 + g 71 -6.9 -4.0942 | gap 1 AAATATATACTTTTT TCCCTTTGG-GC ACT GCACCAAACGGA TTTCTATAATAAATA glgP 3543732 - 3541294 - | hypothetical protein TERM 4227 3543052 - 3543070 + g 82 -6.1 -5.01497 | TGCACTCCACAATCT CAATGTA TTTAC TACATTG TTTTTATATCCTACT glgA 3545194 - 3543767 - | hypothetical protein glgB 3547215 - 3545248 - | hypothetical protein TERM 4228 3547518 - 3547464 - R 70 -3.2 -5.37043 | gap 1 ATTCCATATAAAAAA TGCCTTCTTTAGA-TAAACAGTT CTGTCATTTT AACTGTCTGCTCCAAAGAAAGCA TGGATAATTAGTGGA CKL_3499 3548208 - 3547567 - | hypothetical protein CKL_3500 3548487 - 3548251 - | hypothetical protein CKL_3501 3548674 - 3549036 + | penicillinase repressor-related protein TERM 4229 3550719 - 3550704 - g 76 -3.4 -5.47218 | TTGGATTCAAAAAAA TATTTT TTAC AAAATA CCATTGACAATTCCT TERM 4230 3550941 - 3550954 + G 77 -4.5 -5.21236 | overlap 3550942 CCAACAGCTTATTAT TCAGG AACT CCTGG TTTTTATTATAAATT CKL_3502 3549039 - 3551129 + | penicillin binding protein CKL_3503 3552549 - 3551188 - | cation efflux pump TERM 4231 3552647 - 3552663 + r 80 -5.3 -5.34381 | AAACTACTGTAGATT TTTATAA GCA TTATAAA TTTTTATTTACCTTT CKL_3504 3553094 - 3552657 - | transcriptional regulator TERM 4232 3553121 - 3553163 + H 95 -11.8 -3.4071 | gap 1, opp_overlap 3553121 3553127, overlap 3553127 CTACAGCTTACCTAA TTAGAACTCTAACT-ATAT TAAATT ATATTAGTTAGAGTTCTAA TTGTCAATAATTATT TERM 4233 3553163 - 3553121 - H 95 -11.8 -3.07443 | gap 1, opp_overlap 3553121 3553127, overlap 3553127 CTACAGCTTACCTAA TTAGAACTCTAACT-ATAT TAAATT ATATTAGTTAGAGTTCTAA TTGTCAATAATTATT TERM 4234 3553305 - 3553321 + H 93 -4.5 -6.11243 | opp_overlap 3553305 TAAAAAATTAAAAAT CAAAAGA GGT TTTTTTG TTTTTTTTGTTGAAT CKL_3505 3553348 - 3554058 + | hypothetical protein TERM 4235 3554333 - 3554367 + G 74 -7.4 -4.05678 | opp_overlap 3554325 3554332 3554336 3554340 3554343 3554349, overlap 3554336 3554349 ATTGAAATTAACAAT TTATTAATAACAAATG TAC CATTTGCTATTAATGG TATTTTGTTTGCGCC TERM 4236 3554336 - 3554364 + G 74 -9.1 -3.05714 | opp_overlap 3554325 3554332 3554336 3554340 3554343 3554349, overlap 3554333 3554349 GAAATTAACAATTTA TTAATAACAAATG TAC CATTTGCTATTAA TGGTATTTTGTTTGC TERM 4237 3554364 - 3554336 - g 86 -11.3 -2.69957 | opp_overlap 3554336 3554333 3554349, overlap 3554325 3554332 3554340 3554343 3554349 GAAATTAACAATTTA TTAATAACAAATG TAC CATTTGCTATTAA TGGTATTTTGTTTGC TERM 4238 3554357 - 3554343 - g 70 -7.2 -3.75506 | opp_overlap 3554336 3554333 3554349, overlap 3554332 3554340 3554336 3554349 ACAATTTATTAATAA CAAATG TAC CATTTG CTATTAATGGTATTT CKL_3506 3554177 - 3554707 + | hypothetical protein CKL_3507 3554923 - 3555453 + | hypothetical protein CKL_3508 3556829 - 3555870 - | permease TERM 4239 3556155 - 3556142 - G 73 -8.1 -3.45088 | CTAAAATAAATCTAA GCAGC ATAA GCTGC CATGGATTTTTTACA CKL_3509 3556872 - 3557549 + | transcriptional regulator TERM 4240 3558074 - 3558063 - g 70 -4.4 -4.86621 | ACTCTTAATGAAAAA GGAT ATGA ATCC AATGAAAATTTAGAT CKL_3510 3557568 - 3558686 + | hypothetical protein CKL_3511 3558699 - 3559496 + | ABC transporter ATPase CKL_3512 3559493 - 3560626 + | transporter protein fabH2 3561755 - 3560769 - | hypothetical protein CKL_3514 3562157 - 3561825 - | hypothetical protein TERM 4241 3562265 - 3562243 - R 100 -12.8 -4.86293 | GAACAAAAATTAAAA GGTGCCTATA TAT CATAGGCACC AAAAAAAGTATAAAT CKL_3515 3563915 - 3562509 - | FAD/FMN-containing dehydrogenase etfA2 3564937 - 3563939 - | EtfA2 etfB2 3565743 - 3564940 - | EtfB2 TERM 4242 3565819 - 3565786 - R 86 -6.2 -5.29846 | gap 2, opp_overlap 3565796 AATGGCAAATAAAAA GACAGACCTATTTCGC TGGG GCGAAAT-G-TCTGCC GCGGTACCACCCATT CKL_3518 3567335 - 3566049 - | hypothetical protein CKL_3519 3568397 - 3567516 - | ABC transporter permease TERM 4243 3568289 - 3568301 + g 79 -4.9 -5.24531 | TTGGCTTTATATTAT TATCT AAT AGATA TTTTTTATAGGCAAT TERM 4244 3568411 - 3568423 + r 74 -4.8 -5.10029 | AAAGTATCTTTTCAG GCCA GAGGA TGGC TTTTTTCAAATTCAT CKL_3520 3568694 - 3568407 - | hypothetical protein CKL_3521 3569400 - 3568675 - | ABC transporter ATPase CKL_3522 3569570 - 3570193 + | transcriptional regulator CKL_3523 3571011 - 3570355 - | transcriptional regulator CKL_3524 3571148 - 3571819 + | hypothetical protein TERM 4245 3571949 - 3571923 - T 100 -13.1 -2.79183 | opp_overlap 3571921 3571921, overlap 3571925 CCTATTTTTATTAGA CACCTTTAGGG GGATT CCCCAAAGGTG CACTTTAAGTCTTAT TERM 4246 3571947 - 3571925 - T 80 -9.9 -2.94416 | opp_overlap 3571921 3571921, overlap 3571923 TATTTTTATTAGACA CCTTTAGGG GGATT CCCCAAAGG TGCACTTTAAGTCTT CKL_3525 3572485 - 3572069 - | hypothetical protein aroP 3574017 - 3572656 - | AroP TERM 4247 3574189 - 3574219 + H 100 -17.1 -2.98312 | opp_overlap 3574195, overlap 3574195 TATCCCTCCATTTTA GCAAAAGGCATCT CCCAA AGATGCCTTTTGC TATGTAAATATTTTT TERM 4248 3574213 - 3574195 - H 88 -9.6 -4.26903 | opp_overlap 3574189 3574195 TCCATTTTAGCAAAA GGCATCTC CCA AAGATGCC TTTTGCTATGTAAAT TERM 4249 3574195 - 3574213 + H 86 -8.9 -4.39568 | opp_overlap 3574195, overlap 3574189 TCCATTTTAGCAAAA GGCATCT CCCAA AGATGCC TTTTGCTATGTAAAT TERM 4250 3574622 - 3574601 - H 73 -2.9 -5.53288 | opp_overlap 3574601 3574619, overlap 3574619 TTGAATGTAAAAAAA GCCTATATC GTTA GATAAGGGC TTTTAGTCCTTAGAT TERM 4251 3575286 - 3575274 - g 86 -4.1 -5.88565 | opp_overlap 3575280 TGGACAAGAAAAAAA CAACG GTT CGTTA CAACAGCGAATGGTT tyrS2 3574913 - 3576121 + | tyrosyl-tRNA synthetase TERM 4252 3576152 - 3576130 - f 100 -12.1 -4.30844 | opp_overlap 3576136 AGGGTAGTATCAAAA GGAGAAGCA GGAAT TGCTTCTCC CTAGAACATAAACAA CKL_3528 3576787 - 3577149 + | hypothetical protein TERM 4253 3577406 - 3577383 - T 100 -13.2 -3.767 | opp_overlap 3577383 TATTTACGGACTAAA GCCTGCACCT TGAG AGGTACAGGC TTATCATCACTTTAT TERM 4254 3577383 - 3577406 + T 90 -11 -3.46178 | opp_overlap 3577383 TATTTACGGACTAAA GCCTGCACCT TGAG AGGTACAGGC TTATCATCACTTTAT CKL_3529 3577615 - 3577421 - | small acid-soluble spore protein CKL_3530 3578106 - 3577738 - | hypothetical protein TERM 4255 3579137 - 3579117 - R 78 -7.7 -4.3665 | TAATTTAAATACAAA TCTTGTTAA GGT TCAACAAGA ATACTGATACTTCTG TERM 4256 3580472 - 3580507 + r 93 -9.2 -4.63932 | opp_overlap 3580476 3580478 3580480, overlap 3580462 3580478 TATACGTGTATATGT TAAAGATAGACACTGT TTGA GCAGTGTCCATTTTTA TTTTGTTCACAAATA TERM 4257 3580501 - 3580478 - R 70 -7.5 -3.39844 | opp_overlap 3580462 3580472 3580478, overlap 3580476 3580480 TGTATATGTTAAAGA TAGACACTG TTTGAG CAGTGTCCA TTTTTATTTTGTTCA TERM 4258 3580478 - 3580501 + r 90 -6 -5.62288 | opp_overlap 3580478 3580476 3580480, overlap 3580462 3580472 TGTATATGTTAAAGA TAGACACTGT TTGA GCAGTGTCCA TTTTTATTTTGTTCA CKL_3531 3581142 - 3580822 - | hypothetical protein TERM 4259 3581766 - 3581818 + H 100 -10.2 -4.77036 | opp_overlap 3581765, overlap 3581768 AGTAACCAAATAACC TGTACCAGTAAATACCTATTCATT CAACA AATTGTTAGGTATTTACTGGTATG TTTTTCCTAATGGGA TERM 4260 3581768 - 3581816 + H 100 -12.8 -4.00443 | opp_overlap 3581765, overlap 3581766 TAACCAAATAACCTG TACCAGTAAATACCTATTCATT CAACA AATTGTTAGGTATTTACTGGTA TGTTTTTCCTAATGG TERM 4261 3582217 - 3582198 - g 74 -6.4 -4.40732 | overlap 3582200 CAAAGGACAAAAGAA GGTCTTGC TGCA GCAAGAGC ACGTGGTAGAAAAGG CKL_3532 3582087 - 3582392 + | resolvase TERM 4262 3582728 - 3582716 - T 79 -9.1 -3.45776 | opp_overlap 3582713 3582712 TTAAACTCACCATAA CCACG ACA CGTGG TAAATATTTCATTAC CKL_3533 3583912 - 3583142 - | ABC transporter permease CKL_3534 3584671 - 3583913 - | ABC transporter ATPase CKL_3535 3585037 - 3584687 - | hypothetical protein CKL_3536 3585394 - 3585047 - | hypothetical protein CKL_3537 3585699 - 3585535 - | transcriptional regulator CKL_3538 3586240 - 3586058 - | hypothetical protein TERM 4263 3586260 - 3586270 + r 77 -3.2 -5.63504 | AAAGTCGACGCCTTT CAGG ACT TCTG TTTTTTTATAGGATT CKL_3539 3586672 - 3586319 - | hypothetical protein CKL_3540 3587001 - 3586675 - | transcriptional regulator TERM 4264 3587133 - 3587176 + r 100 -11.8 -4.24726 | opp_overlap 3587125 3587127 3587143, overlap 3587140 AATGCAAGATGCTAA CCGGCAAGCAGGTCAACTGT GACC ACAGTTGACCTGCTTATAGA TTTTACCATTCTTAT TERM 4265 3587140 - 3587169 + r 100 -19.5 -3.52113 | opp_overlap 3587125 3587127 3587143, overlap 3587133 GATGCTAACCGGCAA GCAGGTCAACTGT GACC ACAGTTGACCTGC TTATAGATTTTACCA TERM 4266 3587166 - 3587143 - R 100 -14 -2.73542 | opp_overlap 3587140 3587133, overlap 3587125 3587127 GCTAACCGGCAAGCA GGTCAACTGT GACC ACAGTTGACC TGCTTATAGATTTTA CKL_3541 3589378 - 3587282 - | ABC transporter permease CKL_3542 3590187 - 3589375 - | ABC transporter ATPase TERM 4267 3589665 - 3589680 + g 71 -5.4 -4.56597 | gap 1 TGGAAAGTGCCCTTG CAGCCGC AGC GCG-CTG TTTTTCACCGCCGGA CKL_3543 3591200 - 3590190 - | sensory transduction histidine kinase CKL_3544 3591852 - 3591166 - | transcriptional regulator TERM 4268 3591243 - 3591253 + gr 78 -6.8 -4.40561 | overlap 3591240 AATTTTGAAGGCCAA GCTC CAT GAGC TTCTTTTTCACGCGG CKL_3545 3592544 - 3592236 - | hypothetical protein CKL_3546 3592971 - 3592777 - | hypothetical protein TERM 4269 3592829 - 3592811 - G 89 -10.4 -3.82865 | opp_overlap 3592810 3592806 3592815 TAAATAATATTTAAA CCAATAAC TAT GTTATTGG ATATAGTTTGCCTTT CKL_3547 3593233 - 3593051 - | hypothetical protein CKL_3548 3593698 - 3593405 - | hypothetical protein CKL_3549 3594359 - 3594180 - | hypothetical protein CKL_3550 3595169 - 3595309 + | transposase TERM 4270 3595996 - 3596030 + T 86 -10 -3.68351 | opp_overlap 3595996 3596000 3596020, overlap 3596000 TTTTGTAAACGTAAA GAAACGTCGGCTCTGA AAA TCAAAGCCACCGTTTC TTTGGCTCATGAAGA TERM 4271 3596030 - 3595996 - T 100 -14.4 -3.84451 | opp_overlap 3595996 3596000, overlap 3596000 3596020 TTTTGTAAACGTAAA GAAACGTCGGCTCTGA AAA TCAAAGCCACCGTTTC TTTGGCTCATGAAGA TERM 4272 3596026 - 3596000 - T 90 -9.4 -4.53439 | opp_overlap 3596000 3595996, overlap 3595996 3596020 GTAAACGTAAAGAAA CGTCGGCTCTGA AAA TCAAAGCCACCG TTTCTTTGGCTCATG TERM 4273 3596053 - 3596065 + T 100 -5.5 -6.09196 | opp_overlap 3596048 3596046 CATGAAGATATGTCT GCTGT ACG ACGGC TTTTTTTCTTTTGCC CKL_3551 3597951 - 3596149 - | ABC transporter permease CKL_3552 3598631 - 3597948 - | ABC transporter ATPase CKL_3553 3599741 - 3598704 - | sensory transduction histidine kinase TERM 4274 3599030 - 3599014 - G 75 -9.5 -2.85545 | overlap 3599011 TTTTTAACAATATTA CTGATTG CTT CAATCAG CCAATTACGGTCACA TERM 4275 3599125 - 3599109 - G 75 -8.1 -3.72576 | opp_overlap 3599100 3599111 CTGCTTGGCACGAAA TAGAAAG TGC CTTTCTA TACTACTCATCATTT TERM 4276 3599692 - 3599676 - G 72 -7.3 -3.83816 | AGAAATCAAGGTAAA TGCTACT ATA AGCAGCA ATACCAAACGAAAAA CKL_3554 3600436 - 3599738 - | transcriptional regulator TERM 4277 3599833 - 3599847 + g 71 -8.6 -2.89564 | overlap 3599835 CGTCCTCGATTTTTG TACGCA ATC TGCGTA TATATACGGTAAGAG CKL_3555 3600627 - 3600433 - | transposase TERM 4278 3600722 - 3600742 + r 80 -9.1 -3.63073 | opp_overlap 3600693 CGGGTACTCACTTCC GTATTTTGC CCT GCAAAATGC TTGTTGGGAAGTGTC CKL_3556 3601046 - 3600714 - | transposase TERM 4279 3601100 - 3601131 + r 100 -11.8 -5.14563 | TGAGTGTTGACACTT TGAATCTTTCACTC TTTC GAGTGGAAGATTTA TTTTTTACTAAAAAG TERM 4280 3601176 - 3601146 - R 83 -7.6 -4.7254 | opp_overlap 3601145 ATTTTTTACTAAAAA GCTGCCCCATTAAA TTT TTTAGTGCGACAGC CCCTTTTCTCATACA TERM 4281 3601220 - 3601197 - R 76 -4.6 -5.36441 | TTCTCATACAAAAAA TAGACGCTCA TCTC TGAATGTCTA AATAGAAAAAAGGGT TERM 4282 3601253 - 3601232 - R 100 -7.3 -5.56264 | opp_overlap 3601232 TCTAAATAGAAAAAA GGGTACTGC TTCC ACAATACCC TTTAATCATACAATA CKL_3557 3602815 - 3601406 - | tRNA (uracil-5-)-methyltransferase-related protein TERM 4283 3602854 - 3602839 - R 76 -9 -3.05247 | opp_overlap 3602839, overlap 3602838 CTACTAAAAAAAATT GCACCT GTAA AGGTGC TTAAATATGGAATCA TERM 4284 3602839 - 3602854 + r 76 -9 -3.12999 | opp_overlap 3602839 3602838 CTACTAAAAAAAATT GCACCT GTAA AGGTGC TTAAATATGGAATCA pyk 3604715 - 3602958 - | Pyk pfk1 3605726 - 3604770 - | 6-phosphofructokinase dnaE 3609405 - 3605929 - | DNA polymerase III DnaE TERM 4285 3607542 - 3607554 + g 74 -7.7 -3.90038 | CGGCTATTATATCCT CCAGA GAA TCTGG TTTCAATTCTTTCAT CKL_3561 3610836 - 3609532 - | hypothetical protein CKL_3562 3611798 - 3610848 - | hypothetical protein CKL_3563 3613140 - 3611812 - | hypothetical protein TERM 4286 3612993 - 3612975 - G 85 -6.8 -4.96762 | opp_overlap 3612975 TATATACTACAAAAA TTCCTGAT ACC ATCAAGAA TATATAAAAAGATAT CKL_3564 3614018 - 3613137 - | hypothetical protein TERM 4287 3614165 - 3614134 - R 80 -6 -5.00412 | gap 1 AAATATAACTAAAAA GGAGAATCCAGTGCA ATA TACACTA-ATCCTCC AGCTTTAATGTCTTA murB 3615102 - 3614188 - | UDP-N-acetylenolpyruvoylglucosamine reductase uvrC 3617181 - 3615313 - | excinuclease ABC subunit C CKL_3567 3617804 - 3617199 - | hypothetical protein CKL_3568 3619365 - 3617938 - | peptidoglycan synthetase TERM 4288 3619111 - 3619125 + g 70 -6.4 -4.22231 | opp_overlap 3619111, overlap 3619113 TGCATGGGCAAACAT TGCACC TCC GGTGTA TTCTCTTTTTTGATT CKL_3569 3620584 - 3619370 - | cell division protein, ftsW-related TERM 4289 3619628 - 3619614 - G 78 -2.2 -5.77677 | TAAAATAATAAAAAA TACAAT ATT ATTATA GAAAAACCTATTAAT CKL_3570 3621084 - 3620644 - | hypothetical protein uvrA 3623976 - 3621154 - | hypothetical protein uvrB 3625996 - 3624002 - | excinuclease ABC subunit B CKL_3573 3627289 - 3626000 - | hypothetical protein TERM 4290 3627426 - 3627394 - R 90 -9.4 -4.49906 | opp_overlap 3627402 CAATAGTTAAATAAA TTAAATTAGACAGA GTTTG TCTGCCTAACTTAA AAATCCCAAACATAT CKL_3574 3628640 - 3627465 - | protease CKL_3575 3629731 - 3628841 - | cell division protein, ftsX-related CKL_3576 3630407 - 3629721 - | ATPase involved in cell division TERM 4291 3630561 - 3630603 + r 71 -8.2 -3.27205 | gap 1, opp_overlap 3630561 3630569, overlap 3630569 CTTTAAGATACTCAA TTA-AAAAACGATGTTATA AAATTA TATAGCATCGTTTTTATAA TAATTTATTTTAATG TERM 4292 3630594 - 3630569 - R 77 -4.8 -5.28481 | opp_overlap 3630561 3630569, overlap 3630561 TACTCAATTAAAAAA CGATGTTATA AAATTA TATAGCATCG TTTTTATAATAATTT TERM 4293 3630569 - 3630594 + r 85 -7 -4.95806 | opp_overlap 3630569 3630561, overlap 3630561 TACTCAATTAAAAAA CGATGTTATA AAATTA TATAGCATCG TTTTTATAATAATTT tktB 3631549 - 3630608 - | TktB tktA 3632373 - 3631549 - | hypothetical protein TERM 4294 3632414 - 3632426 + r 75 -3.5 -5.38839 | opp_overlap 3632403 AACTTTTTATAGTTA TTTTA ACA TAAAA TTTTATTTTTATATA TERM 4295 3632463 - 3632484 + r 95 -11.6 -4.0641 | opp_overlap 3632459 3632458 CCACACAAAACTTTA CCCCTGTG GTTTAA CACAGGGG TTTATATCGGTAAAG CKL_3579 3632900 - 3632550 - | transcriptional regulator CKL_3580 3633186 - 3632860 - | hypothetical protein alr 3634910 - 3633735 - | alanine racemase TERM 4296 3634523 - 3634535 + g 81 -4.1 -5.61277 | CCATTCCCGTATCTA GTGCA ATA TGTAC TTTTATTTTTTTATC CKL_3582 3635667 - 3635062 - | hypothetical protein TERM 4297 3635275 - 3635291 + g 74 -3.8 -5.31059 | CTGATTACTTATATT TTGAAA TGAAT TTTCAA TTTTTTCATTAGTAT CKL_3583 3637258 - 3635759 - | sugar kinase TERM 4298 3636229 - 3636239 + gr 72 -2.6 -5.47914 | overlap 3636232 CATCTATTATTACGG TTTT TGT AAAA TTTTTTATAATTTTT acpS 3637634 - 3637230 - | 4'-phosphopantetheinyl transferase TERM 4299 3637776 - 3637789 + r 84 -6.7 -5.16151 | opp_overlap 3637776, overlap 3637770 TACATAATTAAAAAA GAGGA TTTC TCCTC TTTTTATTAAATTTA TERM 4300 3637789 - 3637776 - R 88 -6.7 -5.35354 | opp_overlap 3637776 3637770 TACATAATTAAAAAA GAGGA TTTC TCCTC TTTTTATTAAATTTA CKL_3585 3638152 - 3637802 - | hypothetical protein CKL_3586 3638910 - 3638431 - | phosphotransferase system IIA component CKL_3587 3639707 - 3639015 - | spore cortex-lytic enzyme precursor TERM 4301 3639785 - 3639822 + r 91 -8.1 -5.07107 | gap 1, opp_overlap 3639785 AAATACATAAAAAAA TACTATTAAT-TTCACTA TTC TAGTGATCATTAATAGTA TTTTTTAAAAATTTG TERM 4302 3639822 - 3639785 - R 100 -8.1 -5.82281 | gap 1, opp_overlap 3639785 AAATACATAAAAAAA TACTATTAAT-TTCACTA TTC TAGTGATCATTAATAGTA TTTTTTAAAAATTTG CKL_3588 3641114 - 3639852 - | hypothetical protein TERM 4303 3641317 - 3641306 - R 100 -7.2 -5.77856 | opp_overlap 3641305 3641306 AATAAATTAAAAAAA GCCC TAGA GGGC CTTATTAAACTAAAA TERM 4304 3641580 - 3641554 - R 71 -8.3 -3.21063 | opp_overlap 3641553 3641559, overlap 3641547 3641559 CATTGAAATGCAACA GTAAATATAAA ATTTA TTTATATTTAC CTATTACAGAAATTT CKL_3589 3642318 - 3641668 - | hypothetical protein CKL_3590 3643298 - 3642408 - | putative lipid kinase TERM 4305 3643457 - 3643493 + r 95 -12 -3.64049 | gap 1, opp_overlap 3643457 3643461, overlap 3643461 TATCACCATGAATAA TAAATCCACAAG-ATTA GTTG TAATTCTTGTGGATTTA TTTACAAATTGTTAA TERM 4306 3643493 - 3643457 - R 95 -12 -3.75738 | gap 1, opp_overlap 3643457 3643461, overlap 3643461 TATCACCATGAATAA TAAATCCACAAG-ATTA GTTG TAATTCTTGTGGATTTA TTTACAAATTGTTAA TERM 4307 3643489 - 3643461 - R 83 -8.4 -4.49316 | gap 1, opp_overlap 3643457 3643461, overlap 3643457 ACCATGAATAATAAA TCCACAAG-ATTA GTTG TAATTCTTGTGGA TTTATTTACAAATTG TERM 4308 3643461 - 3643489 + r 83 -8.4 -4.43877 | gap 1, opp_overlap 3643461 3643457, overlap 3643457 ACCATGAATAATAAA TCCACAAG-ATTA GTTG TAATTCTTGTGGA TTTATTTACAAATTG CKL_3591 3643937 - 3643512 - | hypothetical protein CKL_3592 3644667 - 3643999 - | hypothetical protein TERM 4309 3644892 - 3644878 - g 76 -8.6 -3.43264 | AAGGAGTGATTACAA TGGCTA AAA TAGCCA AAAGTTCTGTGCCTA pssA 3644877 - 3645398 + | hypothetical protein CKL_3594 3645839 - 3645462 - | hypothetical protein TERM 4310 3646048 - 3645994 - R 95 -9.1 -4.85918 | opp_overlap 3646001 3646047, overlap 3646001 TACTATATAACAAAA TAAAAAACACATTAAACTATTAAAT ATAAA ATTCCATAATTTAATGTGTTTTATA ATAATATTATTTTTA TERM 4311 3646041 - 3646001 - R 100 -7.2 -5.92399 | opp_overlap 3646001, overlap 3645994 TAACAAAATAAAAAA CACATTAAACTATTAAAT ATAAA ATTCCATAATTTAATGTG TTTTATAATAATATT cat3 3647384 - 3646071 - | Cat3 TERM 4312 3646793 - 3646813 + g 80 -10.5 -2.60555 | overlap 3646791 3646789 CTATTGTCTTCTCTA CTTCTCCTA TTT TAGGAGGAG TCAATTCTAGAATTG TERM 4313 3647198 - 3647229 + g 71 -5.3 -4.62203 | opp_overlap 3647198, overlap 3647208 CATTTTTATAATTAA GTATAAGATTGTG TATCTT TACACTCTTATAC TTTTCCTTATTTGCA TERM 4314 3647459 - 3647434 - R 88 -6.9 -5.27938 | gap 1 ATTTTTAAATAAAAA CACCTTCCTCAT TTT ATG-GGCAGGTG AGAACATGGATATAA CKL_3596 3649451 - 3647736 - | hypothetical protein TERM 4315 3647817 - 3647796 - G 80 -7.5 -4.2461 | ATTGTCAGGAACAAA TTTTAAATC TACA GATTTAAAA AAGTGCAAAAAACTT TERM 4316 3650198 - 3650171 - g 100 -9.4 -5.76949 | TATGCTGAAAAAAAA TAGTATATCTTC TACA AAAGATATACTA ATAGCTATTCTAGAT CKL_3597 3649578 - 3650258 + | hypothetical protein CKL_3598 3650270 - 3650650 + | hypothetical protein TERM 4317 3650696 - 3650732 + F 84 -9.1 -4.06993 | opp_overlap 3650698 3650700, overlap 3650709 ATAAATTATTTATGA TATACTATAATTGTATA TGT TATATATTTATAGTATA TTGTTTAATATATAG TERM 4318 3651661 - 3651633 - g 82 -4.7 -5.35459 | ATATATTAGAAAAAA TACAGGAAAACCT TCC AAACTTTCCTATA GTTCTCCATGGAGCT TERM 4319 3651871 - 3651841 - g 77 -9.9 -2.57344 | opp_overlap 3651846, overlap 3651840 3651846 GACTGCTGCTATAAG GAAAACTTTTGGA GATAG TCCAAAGGTTTTC GATCCAAGAAAGTAT TERM 4320 3651846 - 3651866 + G 70 -6.2 -4.18018 | opp_overlap 3651841 3651840 3651846 CTGCTATAAGGAAAA CTTTTGGA GATAG TCCAAAGG TTTTCGATCCAAGAA fba 3651038 - 3651979 + | hypothetical protein TERM 4321 3652060 - 3652093 + F 89 -7.6 -5.06414 | opp_overlap 3652067, overlap 3652064 GGATAAAAATTATAT TATGGAACTTTCCT AAATTG AGGAAAGTTCTTTA TTTTTATTCGAACAC TERM 4322 3652064 - 3652089 + F 100 -10.6 -5.05606 | opp_overlap 3652067, overlap 3652060 AAAAATTATATTATG GAACTTTCCT AAATTG AGGAAAGTTC TTTATTTTTATTCGA CKL_3600 3652196 - 3652735 + | hypothetical protein CKL_3601 3652745 - 3653626 + | hypothetical protein CKL_3602 3653610 - 3654197 + | hypothetical protein CKL_3603 3654224 - 3654742 + | hypothetical protein TERM 4323 3655137 - 3655148 + F 70 -5.8 -4.44301 | opp_overlap 3655137 3655135 TGAAAAAATCAGATA CGGT AAAA ACCG TTATTTATTTTGAGT TERM 4324 3655210 - 3655245 + F 100 -8.5 -5.84432 | opp_overlap 3655209, overlap 3655200 3655211 TACCGCGGAAAGTAG TCTTTTCGTCTCTTA CAATAC TAAGAGATGAAAAGC TTTTTTTATATTCTA TERM 4325 3655211 - 3655244 + F 100 -12 -4.08219 | opp_overlap 3655209, overlap 3655200 3655210 ACCGCGGAAAGTAGT CTTTTCGTCTCTTA CAATAC TAAGAGATGAAAAG CTTTTTTTATATTCT leuS 3655388 - 3657823 + | leucyl-tRNA synthetase TERM 4326 3657824 - 3657841 + T 100 -11.3 -4.93661 | opp_overlap 3657809 3657807 3657819 3657827 GTAGTTAAACCTTAA CCACCAG TTCA CTGGTGG TTTTCTTATTAATCT CKL_3606 3658646 - 3657855 - | hypothetical protein TERM 4327 3658104 - 3658119 + g 70 -4.6 -4.88222 | opp_overlap 3658104 CTCATCCAGCTGAAA TGCAGC ATCC GCGGCA TTTTTAAGTTTTAAT CKL_3607 3658766 - 3659578 + | hypothetical protein CKL_3608 3660345 - 3659659 - | phosphohydrolase CKL_3609 3660616 - 3660350 - | hypothetical protein CKL_3610 3662330 - 3660660 - | hypothetical protein TERM 4328 3661460 - 3661479 + g 71 -3 -5.13354 | gap 1, opp_overlap 3661465, overlap 3661463 3661465 TATTTTCTCTCATTA TACTAGATT TTA AATCT-GTA TTTGTTTTTTCTCCA TERM 4329 3662442 - 3662424 - R 91 -3.9 -5.94214 | gap 1, opp_overlap 3662418 3662424 AATACAATAAAAAAA TCTGGAGA CATG TC-CCAGA TTTTTAGTTACTATT CKL_3611 3663089 - 3662463 - | hypothetical protein TERM 4330 3663312 - 3663295 - R 93 -3.3 -6.14618 | GATAAAATAAAAAAA CCCGGCA AAAA CACCAGG GCTAATAAACATATT tex 3665724 - 3663571 - | Tex TERM 4331 3664505 - 3664488 - G 82 -9.9 -3.2302 | overlap 3664484 CCGAAGCAGAATATA CAGAAGC TCCG GCTTCTG ATACCATTACATAAT TERM 4332 3664945 - 3664959 + g 79 -7.2 -4.53439 | TACACTTCTTTCTAT GTAACT ATC AGTTAC TTTATTTCCCTTTAG TERM 4333 3666085 - 3666095 + r 73 -3.2 -5.49579 | TGGCATTCTGCGTTG TGGT CCT GCCA TTTTATTTTTTCTCC CKL_3613 3667320 - 3666136 - | ABC transporter permease TERM 4334 3666597 - 3666609 + g 84 -3.4 -5.73672 | TTACATCAGGGTGAA GAAC ATTTA GTTC TTTTTTTACTTCTTT CKL_3614 3668006 - 3667317 - | ABC transporter ATPase CKL_3615 3669042 - 3667981 - | hypothetical protein CKL_3616 3669777 - 3669100 - | hypothetical protein TERM 4335 3669916 - 3669892 - R 95 -4.9 -6.00086 | opp_overlap 3669895, overlap 3669893 3669895 ACATCATAAAAAAAA TTATGGGCGCA TCA TGCACCCATTT ATCATTTACCACTTT TERM 4336 3669915 - 3669893 - R 81 -8.4 -4.17611 | opp_overlap 3669895, overlap 3669892 3669895 CATCATAAAAAAAAT TATGGGCGCA TCA TGCACCCATT TATCATTTACCACTT TERM 4337 3669895 - 3669913 + r 81 -8.8 -4.13654 | opp_overlap 3669895 3669893 3669892 TCATAAAAAAAATTA TGGGCGCA TCA TGCACCCA TTTATCATTTACCAC TERM 4338 3669913 - 3669895 - R 90 -11 -3.65606 | opp_overlap 3669895, overlap 3669893 3669892 TCATAAAAAAAATTA TGGGCGCA TCA TGCACCCA TTTATCATTTACCAC prfB 3670904 - 3669918 - | peptide chain release factor 2 secA 3673550 - 3671046 - | preprotein translocase subunit SecA TERM 4339 3671644 - 3671658 + g 74 -7.2 -4.03078 | opp_overlap 3671643 3671646, overlap 3671652 TGGGAATCTACAATG GAGTTT ATT AAACTC TTTATCATATCCTGC TERM 4340 3672214 - 3672230 + g 76 -5.2 -5.04175 | opp_overlap 3672214 TTTCTCTTTAACATA TCTGAA AGCAA TTCAGA TTTTTCTATACTTAC TERM 4341 3673509 - 3673531 + g 75 -4.9 -5.01732 | overlap 3673511 AATTCTCTTTACTTC TCTTTGGCT ATATG AGCCAAATA TTTTTTGAAAAAGTT TERM 4342 3673511 - 3673529 + g 77 -7.5 -4.13561 | overlap 3673509 TTCTCTTTACTTCTC TTTGGCT ATATG AGCCAAA TATTTTTTGAAAAAG TERM 4343 3673679 - 3673701 + r 93 -12 -2.9296 | opp_overlap 3673679 ATATTAAATTATAAA GAGAGGAAGC TCT GCTTCCTCCC TGTAGTTGACCTTTA TERM 4344 3673701 - 3673679 - R 100 -14.2 -4.16443 | opp_overlap 3673679 ATATTAAATTATAAA GAGAGGAAGC TCT GCTTCCTCCC TGTAGTTGACCTTTA CKL_3619 3674241 - 3673714 - | ribosome-associated protein TERM 4345 3674265 - 3674294 + r 71 -7.3 -3.81948 | opp_overlap 3674293, overlap 3674264 CCCCTTCCTTATGAT TATCCTTAGCATA TATT TATGTAAAGGATA TATTTTATAAAATTA TERM 4346 3674450 - 3674424 - R 90 -5.9 -5.68438 | opp_overlap 3674424 3674427 TCACTAAATAAAAAA TAAGTACTGGC TTTAT ACCAGTGCTTA TTTTAAAAATACCAA TERM 4347 3674424 - 3674450 + r 75 -7.4 -4.11216 | opp_overlap 3674424, overlap 3674427 TCACTAAATAAAAAA TAAGTACTGG CTTTATA CCAGTGCTTA TTTTAAAAATACCAA ilvE3 3675690 - 3674656 - | branched-chain amino acid aminotransferase TERM 4348 3675983 - 3675958 - H 100 -10.7 -4.49981 | TATATTATGACAAAA TTGTACAAAAT AATT ATTTTGTACAA TAAATAGTTGAGGAG CKL_3621 3676006 - 3676605 + | hypothetical protein CKL_3622 3676970 - 3677965 + | hypothetical protein TERM 4349 3678013 - 3677972 - T 100 -14.1 -3.28405 | opp_overlap 3677966 3677976, overlap 3677965 3677976 ACAAGATAGTATTAA GTAACTTATACGCCTAATT AAAT AATTAAGTGTATAAGTTAC TACAGCAGTTTTTTA TERM 4350 3678009 - 3677976 - T 79 -9.1 -3.42407 | opp_overlap 3677966 3677976, overlap 3677965 3677972 GATAGTATTAAGTAA CTTATACGCCTAATT AAAT AATTAAGTGTATAAG TTACTACAGCAGTTT TERM 4351 3677976 - 3678009 + T 78 -9.1 -3.1506 | opp_overlap 3677965 3677976 3677972, overlap 3677966 GATAGTATTAAGTAA CTTATACGCCTAATT AAAT AATTAAGTGTATAAG TTACTACAGCAGTTT CKL_3623 3678316 - 3678122 - | hypothetical protein CKL_3624 3678676 - 3678479 - | small acid-soluble spore protein glf 3678924 - 3680045 + | Glf TERM 4352 3680087 - 3680049 - T 93 -11.2 -3.42593 | overlap 3680043 AAAAATATATAGTAA GATGCATTGAAAGTTTAA CCA TAAAACCTTCGATGCATC TCCACAAACAATACT CKL_3626 3681141 - 3680125 - | glycosyltransferase TERM 4353 3680603 - 3680613 + g 70 -4 -5.04385 | GTATGTTTTGGAAGC TGTA AAT TACA TTTTTTAAGAATCTC CKL_3627 3681801 - 3681142 - | phosphatase CKL_3628 3682645 - 3682295 - | hypothetical protein CKL_3629 3682936 - 3682706 - | hypothetical protein TERM 4354 3684227 - 3684201 - H 76 -8.2 -3.79995 | overlap 3684193 GTAAGTACAATACAA TGGTATTATC TAAAAGG GATAATACCA CATAGCCATCAAGCT CKL_3630 3684341 - 3684520 + | transposase CKL_3631 3684551 - 3684952 + | transposase TERM 4355 3685249 - 3685202 - T 76 -8.8 -3.62775 | gap 1, opp_overlap 3685199 3685207 3685209 3685211, overlap 3685203 ATTATTTTTCAATAA TCTCATATATCGTTATATTCTTA TAT CAAG-ATATAACGATATATGTGT CAATAGTTTTTTTTA TERM 4356 3685248 - 3685203 - T 93 -12.3 -2.77344 | gap 1, opp_overlap 3685199 3685207 3685209 3685211, overlap 3685202 TTATTTTTCAATAAT CTCATATATCGTTATATTCTTA TAT CAAG-ATATAACGATATATGTG TCAATAGTTTTTTTT TERM 4357 3685207 - 3685244 + T 77 -9.6 -2.94551 | gap 1, opp_overlap 3685203 3685202, overlap 3685199 3685209 3685211 TTTTCAATAATCTCA TATATCGTTATATTCTT ATATC AAGA-TATAACGATATA TGTGTCAATAGTTTT CKL_3632 3686022 - 3685369 - | hypothetical protein CKL_3633 3687219 - 3686251 - | permease CKL_3634 3687574 - 3687335 - | redox-active disulfide protein CKL_3635 3687906 - 3687613 - | transcriptional regulator TERM 4358 3687657 - 3687667 + g 86 -4 -5.80003 | CAAATTTATCTACAC TATC AAT GATA TTTTTTATTTCTTCA TERM 4359 3688059 - 3688032 - R 100 -10.7 -4.90217 | opp_overlap 3688032 TAAATATATGAAAAA GTCCGTAAGAA TATCTT TTCCTACGGAC TTCTAATTTAAATAT TERM 4360 3688032 - 3688059 + r 76 -8.5 -3.62011 | opp_overlap 3688032 TAAATATATGAAAAA GTCCGTAAGAA TATCTT TTCCTACGGAC TTCTAATTTAAATAT CKL_3636 3688526 - 3688083 - | hypothetical protein TERM 4361 3689146 - 3689119 - g 70 -4.3 -4.89477 | CCTTCAATAATAAAA TACCAACATCT TGAATT AGATATTGATA ACTATTCAGTTAAAC CKL_3637 3688723 - 3689415 + | transcriptional regulator CKL_3638 3689408 - 3690271 + | signal transduction histidine kinase component CKL_3639 3690322 - 3691194 + | signal transduction histidine kinase component TERM 4362 3691414 - 3691404 - g 70 -4 -5.05113 | TTTATAGAAAGAAAA TCTA TTA TAGA AGATATTAAATATTT CKL_3640 3691200 - 3691622 + | hypothetical protein CKL_3641 3692770 - 3691892 - | hydrolase CKL_3642 3693732 - 3692890 - | nicotinate-nucleotide diphosphorylase CKL_3643 3694268 - 3693879 - | NifU-like protein TERM 4363 3694118 - 3694102 - G 77 -3.8 -5.42514 | CCATAAACTAAAAAA CTAATA TCCTC TATTAG ATCATCCTTTACCTT CKL_3644 3694746 - 3694288 - | DNA-binding protein TERM 4364 3694401 - 3694380 - GR 80 -8.7 -3.95073 | opp_overlap 3694380 TTTGAGAGCCACAAA CGGGACAAA TAAA CCTGTCCCG TTCATAGTTCATTTC CKL_3645 3695189 - 3694716 - | ferric uptake regulator CKL_3646 3695562 - 3695206 - | hypothetical protein CKL_3647 3695968 - 3695609 - | hypothetical protein CKL_3648 3696863 - 3696015 - | ATP-binding protein CKL_3649 3697684 - 3696854 - | ATP-binding protein CKL_3650 3698069 - 3697710 - | hypothetical protein CKL_3651 3698902 - 3698066 - | nucleotide-binding protein CKL_3652 3699425 - 3699757 + | hypothetical protein CKL_3653 3700041 - 3699829 - | hypothetical protein CKL_3654 3700155 - 3700292 + | hypothetical protein TERM 4365 3700365 - 3700375 + T 70 -5.4 -4.61353 | opp_overlap 3700349 3700348 3700372 CACACTCACAGACTG TAGG ATA CCTA TTATTTTTATGTGTA CKL_3655 3701230 - 3700457 - | permease TERM 4366 3700609 - 3700598 - GT 70 -5.8 -4.33854 | ATCAAGAAAAGCAAA GCCA AATA TGGC TGAAAAAACGGGTTC CKL_3656 3701396 - 3701190 - | permease TERM 4367 3701452 - 3701414 - R 100 -11.2 -5.9667 | opp_overlap 3701417 AAAAACACAAAAAAA CTATGGTTCGAAATAGGT TAA AGCTATTTCAGACCATAG TATAGAATAAACCGT CKL_3657 3702379 - 3701471 - | transcriptional regulator TERM 4368 3701558 - 3701568 + g 80 -5.4 -5.14965 | CTTGTGAGTAATGAC TCCA ACG TGGA TTTTTTCATCAACCT TERM 4369 3702723 - 3702743 + r 86 -9.9 -3.68416 | opp_overlap 3702723 CATTTATAACACAAA TTTAGGATA CTG TATCCTAAA TTATACTTCTTTTAC TERM 4370 3702743 - 3702723 - R 91 -9.9 -4.28188 | opp_overlap 3702723 CATTTATAACACAAA TTTAGGATA CTG TATCCTAAA TTATACTTCTTTTAC TERM 4371 3702949 - 3702971 + r 70 -5.6 -4.30014 | opp_overlap 3702951, overlap 3702951 GTTTATTATATAAAT AATTGGATGT CAT ACATCCGATA TTTTAAATTCATCAA TERM 4372 3702951 - 3702969 + r 76 -8.2 -3.75051 | opp_overlap 3702951, overlap 3702949 TTATTATATAAATAA TTGGATGT CAT ACATCCGA TATTTTAAATTCATC CKL_3658 3704397 - 3703855 - | hypothetical protein CKL_3659 3705311 - 3704439 - | transcriptional regulator TERM 4373 3705425 - 3705406 - R 76 -8 -3.73068 | opp_overlap 3705410 TTTTTAACGCAATAA TATAGACA AGCT TGTCTATA TACAATTATTTATAC CKL_3660 3705913 - 3705737 - | hypothetical protein CKL_3661 3706018 - 3706263 + | transcriptional regulator CKL_3662 3706396 - 3706680 + | hypothetical protein CKL_3663 3707222 - 3706758 - | hypothetical protein TERM 4374 3707288 - 3707266 - R 70 -8.6 -2.52623 | overlap 3707265 3707263 TTTTCTTCATAATAT TTACACTTGT GAC ACAAGTATAA GAAAAGATTACGAAA CKL_3664 3707778 - 3707332 - | hypothetical protein TERM 4375 3707486 - 3707472 - G 79 -8.6 -3.92625 | overlap 3707481 TATATGGCAATGAAA TTCCGA ACA TCGGAA CATTCCCAACTGAAA CKL_3665 3708672 - 3707983 - | hypothetical protein CKL_3666 3708850 - 3708689 - | hypothetical protein TERM 4376 3708921 - 3708891 - H 100 -12.7 -5.72622 | opp_overlap 3708891, overlap 3708917 TTTATAAACAAAAAA GCCACTTTATCCC CATAT GGGACAAAGTGAC TGCTATGCCACCCAT TERM 4377 3709017 - 3708993 - H 95 -5.7 -5.86976 | CTATAAAATAAAAAA CACTTCACCCC TTA AGGGCAAAATG AATATTCTGCTATAC CKL_3667 3709015 - 3709269 + | hypothetical protein TERM 4378 3709528 - 3709499 - T 78 -9.3 -3.10977 | opp_overlap 3709504, overlap 3709497 3709496 3709504 3709519 TTTAAAATCAAATTA GTATAGCAGCCTT AAAA AAGGCTGCTGTGC TGCACAAATAGTGCT TERM 4379 3709523 - 3709504 - T 93 -12.2 -2.90456 | opp_overlap 3709504, overlap 3709499 3709497 3709496 3709519 AATCAAATTAGTATA GCAGCCTT AAAA AAGGCTGC TGTGCTGCACAAATA TERM 4380 3709504 - 3709523 + T 93 -12.2 -2.78596 | opp_overlap 3709504 3709499 3709497 3709496 3709519 AATCAAATTAGTATA GCAGCCTT AAAA AAGGCTGC TGTGCTGCACAAATA CKL_3668 3710443 - 3709763 - | hypothetical protein CKL_3669 3711444 - 3710416 - | hypothetical protein CKL_3670 3713665 - 3711413 - | exodeoxyribonuclease TERM 4381 3712469 - 3712457 - GH 75 -2.7 -5.67063 | TCCACGAGAAAAAAA TAATG CTT CATCA TCACTTTCTACACCT TERM 4382 3714992 - 3714968 - g 70 -6.5 -4.26622 | AAATGAGATTGAAAA CAAACTTCATA ATA TACGATGTTTG CCAATAATAATGGGA CKL_3671 3714138 - 3715451 + | nitrogenase iron-molybdenum protein, alpha chain TERM 4383 3715933 - 3715923 - g 75 -2.6 -5.60993 | TTTGTTATAAAAAAA TTAA CTG TTAA GAAAAGACAAATAAA TERM 4384 3716394 - 3716408 + G 74 -5.7 -4.72272 | GAGTCTACATATGTA TCTGG AATTA CCAGA TTTTTAGTAAAAGAA CKL_3672 3715458 - 3716774 + | nitrogenase iron-molybdenum protein, beta chain TERM 4385 3717261 - 3717251 - g 76 -5.4 -5.00846 | opp_overlap 3717251, overlap 3717242 GAAAGACTACAAAAA GCTA ACA TAGC TTTTCTAGGACTAAA TERM 4386 3717853 - 3717839 - g 86 -5.8 -5.35815 | opp_overlap 3717848, overlap 3717848 GATATTAAACAAAAA GTAAAA GAA TTTTAC AAAAATTATTATTAT CKL_3673 3716816 - 3717919 + | transporter protein TERM 4387 3717963 - 3717985 + T 76 -4.3 -5.29445 | gap 1, opp_overlap 3717963 AATTAAAATAAAAAA CTCTGTACTA TAAT TA-TACAGAG TTTTTATTGTTAAAG TERM 4388 3717985 - 3717963 - T 95 -5.6 -5.85244 | opp_overlap 3717963 AATTAAAATAAAAAA CTCTGTACTA TAA TTATACAGAG TTTTTATTGTTAAAG metK3 3719170 - 3717995 - | S-adenosylmethionine synthetase TERM 4389 3718512 - 3718502 - G 71 -5.4 -4.65168 | ATTAGAGTCTAAAAA TTCC GGT GGAA CAACAGGTTCTATAA TERM 4390 3719220 - 3719202 - H 100 -4.5 -6.14618 | opp_overlap 3719202 TATAAAATAAAAAAA CCACTTC AATAA GAAGAGG TTAAATAAATTAACT TERM 4391 3719424 - 3719401 - H 93 -5.4 -5.85244 | gap 1, overlap 3719394 AAGTAAAATAAAAAA CACC-CAAAAG TGC CTTTTATGGTG GAGGAAGATGGATTC TERM 4392 3719570 - 3719585 + H 70 -5.4 -4.54297 | gap 1, overlap 3719572 TCAGTTGCTCTACCT GCTGAGC TAT GC-CAGC TTATTTTATTATTAG TERM 4393 3720517 - 3720546 + G 70 -8.1 -3.02371 | gap 1, opp_overlap 3720516 3720515, overlap 3720514 ACAAATAAAATTACT TC-ATCCCTATAGT ACT ATTATAGGGATAGA TGCTTGTTTAGGAAA CKL_3680 3720266 - 3720805 + | hypothetical protein CKL_3681 3721936 - 3720905 - | MreB/Mbl protein CKL_3682 3722288 - 3722034 - | stage III sporulation protein D CKL_3683 3723364 - 3722633 - | hypothetical protein TERM 4394 3723491 - 3723450 - R 100 -20.7 -4.58283 | opp_overlap 3723450 3723453 3723457, overlap 3723457 TAATTTTTGTAAAAA TAATAAAGAGACAAAATGA GATC TCATTTTGTCTCTTTATTA TTTACTCCTTAGATA TERM 4395 3723450 - 3723491 + r 100 -20.7 -3.84961 | opp_overlap 3723450 3723457, overlap 3723453 3723457 TAATTTTTGTAAAAA TAATAAAGAGACAAAATGA GATC TCATTTTGTCTCTTTATTA TTTACTCCTTAGATA TERM 4396 3723453 - 3723488 + r 100 -18 -4.04927 | opp_overlap 3723450 3723457, overlap 3723450 3723457 TTTTTGTAAAAATAA TAAAGAGACAAAATGA GATC TCATTTTGTCTCTTTA TTATTTACTCCTTAG TERM 4397 3723484 - 3723457 - R 100 -14.4 -4.76802 | opp_overlap 3723453 3723450 3723457, overlap 3723450 TGTAAAAATAATAAA GAGACAAAATGA GATC TCATTTTGTCTC TTTATTATTTACTCC TERM 4398 3723457 - 3723484 + r 100 -14.4 -4.60258 | opp_overlap 3723457 3723450, overlap 3723453 3723450 TGTAAAAATAATAAA GAGACAAAATGA GATC TCATTTTGTCTC TTTATTATTTACTCC CKL_3684 3724551 - 3723511 - | stage II sporulation protein D murA2 3725947 - 3724688 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 4399 3726019 - 3726031 + r 70 -4.9 -4.75174 | ACTATTCCTTGACTA TAAAC AAT GTTTA TTTTTACGTTAAATA CKL_3686 3727077 - 3726340 - | hypothetical protein TERM 4400 3726942 - 3726959 + g 71 -8.5 -2.81657 | opp_overlap 3726941 3726942 TATCTTTAAATAAAT CCACTTT TTCT AAAGTGG TGCTGTCTTCTCTTT TERM 4401 3726959 - 3726942 - G 74 -8.5 -3.25202 | opp_overlap 3726942, overlap 3726941 TATCTTTAAATAAAT CCACTTT TTCT AAAGTGG TGCTGTCTTCTCTTT atpC 3727785 - 3727387 - | F0F1 ATP synthase subunit epsilon atpD 3729230 - 3727836 - | F0F1 ATP synthase subunit beta atpG 3730094 - 3729243 - | F0F1 ATP synthase subunit gamma TERM 4402 3730130 - 3730140 + r 74 -2.6 -5.57054 | overlap 3730132 ATATACCTATCCCTC TATT AAA AATA TTTTTTTGAATTCTT atpA 3731635 - 3730121 - | F0F1 ATP synthase subunit alpha atpH 3732185 - 3731640 - | F0F1 ATP synthase subunit delta TERM 4403 3731996 - 3732007 + g 85 -3 -6.09196 | opp_overlap 3731996 TTTTACCTTTAAAAA CATT TATA AATG TTTTTTTCTTTTCAG atpF 3732669 - 3732190 - | F0F1 ATP synthase subunit B atpE 3732976 - 3732731 - | F0F1 ATP synthase subunit C atpB 3733709 - 3733026 - | F0F1 ATP synthase subunit A atpI 3734111 - 3733743 - | AtpI TERM 4404 3734200 - 3734233 + r 75 -7.7 -4.02456 | opp_overlap 3734199 3734200, overlap 3734201 AGAAAATTTCAAAAG CTTATTACATACTTT TACT AAGGTATGTAATAAA TTTATAATACTATTT TERM 4405 3734201 - 3734232 + r 91 -11.2 -3.00389 | opp_overlap 3734200 3734199, overlap 3734200 GAAAATTTCAAAAGC TTATTACATACTTT TACT AAGGTATGTAATAA ATTTATAATACTATT TERM 4406 3734490 - 3734460 - R 100 -10 -4.72333 | opp_overlap 3734460 3734455 3734464, overlap 3734464 AATGACACGTAAAAA TAAAGAAAGCATTA AAT CAATACTTTCTTTA TTTTCTCTCTTAAAT TERM 4407 3734460 - 3734490 + r 81 -7.1 -4.68545 | opp_overlap 3734460 3734464, overlap 3734455 3734464 AATGACACGTAAAAA TAAAGAAAGCATT AAATC AATACTTTCTTTA TTTTCTCTCTTAAAT TERM 4408 3734486 - 3734464 - R 80 -6.4 -4.89966 | opp_overlap 3734464 3734460 3734455, overlap 3734460 ACACGTAAAAATAAA GAAAGCATTA AAT CAATACTTTC TTTATTTTCTCTCTT thlA1 3735705 - 3734524 - | acetyl-CoA acetyltransferase TERM 4409 3734741 - 3734757 + g 82 -9.5 -3.68988 | GCTATACTTTGAGCT GCAAATG CTT CATTTGC TTCTATTAAATCAAA TERM 4410 3736545 - 3736514 - R 100 -6.8 -5.80364 | gap 1, opp_overlap 3736514 3736511 ACTCTAATAAAAAAA CAAAGCAAGTAATCA TTA CGAT-ACTTACTTTG TTCTTTATTTTAGAC thlA2 3737761 - 3736586 - | acetyl-CoA acetyltransferase TERM 4411 3736799 - 3736814 + g 77 -7.6 -4.08221 | overlap 3736800 3736803 TACTGCTAAACTTTG TGAAGC GAAT GCTTCA TTTGCTTCTATTAAG TERM 4412 3736800 - 3736822 + g 87 -11.4 -3.12803 | overlap 3736799 3736803 ACTGCTAAACTTTGT GAAGCGAATG CTT CATTTGCTTC TATTAAGTCTAAATC TERM 4413 3736803 - 3736819 + g 70 -7.3 -3.70446 | overlap 3736799 3736800 GCTAAACTTTGTGAA GCGAATG CTT CATTTGC TTCTATTAAGTCTAA TERM 4414 3738068 - 3738058 - R 76 -4 -5.5319 | opp_overlap 3738058 TAAAAAAAAAACAAA GTTT AGC AAAC ATATATATTTATGGA TERM 4415 3738517 - 3738491 - R 100 -13.8 -5.44638 | ACAACAAAAATAAAA GACTGCCGACAA ATT TTGCCGACAGTC TAAATCATCTATTTT thlA3 3739733 - 3738558 - | acetyl-CoA acetyltransferase TERM 4416 3738771 - 3738786 + g 77 -7.6 -4.08221 | overlap 3738772 3738775 TACTGCCAAACTCTG TGAAGC GAAT GCTTCA TTTGCTTCTATTAAG TERM 4417 3738772 - 3738794 + g 87 -11.4 -3.12803 | overlap 3738771 3738775 ACTGCCAAACTCTGT GAAGCGAATG CTT CATTTGCTTC TATTAAGTCTAAATC TERM 4418 3738775 - 3738791 + g 70 -7.3 -3.70446 | overlap 3738771 3738772 GCCAAACTCTGTGAA GCGAATG CTT CATTTGC TTCTATTAAGTCTAA epsC 3741064 - 3739916 - | EpsC CKL_3700 3742145 - 3741117 - | undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase-related protein CKL_3701 3742883 - 3742458 - | deaminase upp 3743703 - 3743074 - | uracil phosphoribosyltransferase CKL_3703 3744228 - 3743779 - | ribose-5-phosphate isomerase B CKL_3704 3744784 - 3744326 - | protein-tyrosine-phosphatase CKL_3705 3745858 - 3744806 - | hypothetical protein TERM 4419 3745431 - 3745453 + g 82 -7.6 -4.49939 | opp_overlap 3745419 ACATTTGCAGAAGGT GCTGCAATGG GAA CCTTTGCCGC TTTTATAAGTTCTCT zupT 3746647 - 3745925 - | ZupT CKL_3707 3747355 - 3746720 - | hypothetical protein TERM 4420 3746976 - 3746961 - G 76 -5.4 -5.00616 | opp_overlap 3746944 3746961 3746973, overlap 3746963 CGTTTTTTCAAAAAA TCCCTG TTTA CAGGAA TGATTCTATTATTTC prfA 3748489 - 3747416 - | peptide chain release factor 1 TERM 4421 3747623 - 3747635 + g 76 -6.3 -4.70887 | ATTTTTTCTATCTTC TGCAA TAC TTGCA TTTCTTTCTTCCTGA CKL_3709 3749473 - 3748607 - | methyltransferase CKL_3710 3750405 - 3749473 - | hypothetical protein CKL_3711 3750675 - 3751025 + | hypothetical protein TERM 4422 3751132 - 3751115 - f 70 -5.7 -4.3487 | ATACAGAAGTTAAAA TTTAAAG TTCT CTTTAAA CTTGAAAGAGGTGAA rpmE 3751152 - 3751364 + | RpmE TERM 4423 3751407 - 3751387 - T 91 -9.8 -3.92373 | opp_overlap 3751387 CACTTTACTTATAAA CCTGTCTT TTTTT AAGACAGG TTTTTATCTCAATTA TERM 4424 3751387 - 3751407 + T 100 -9.8 -5.00642 | opp_overlap 3751387 CACTTTACTTATAAA CCTGTCTT TTTTT AAGACAGG TTTTTATCTCAATTA CKL_3713 3752874 - 3751420 - | transcription termination factor Rho TERM 4425 3751862 - 3751874 + g 78 -9.1 -3.54511 | opp_overlap 3751860 CCTCCTGAAAGAGTT CTCCC TGT GGGAG TTATAGTTAAATTAT TERM 4426 3752078 - 3752116 + g 82 -6.2 -5.07053 | opp_overlap 3752089 ACTTCTTCCGGTCTT TCATCTATAAGTACAACT ATA AGTTTTATTTCTGGATGA TTTTTTGAAATACTT CKL_3714 3753414 - 3753070 - | hypothetical protein TERM 4427 3753233 - 3753255 + g 91 -7.2 -5.26119 | opp_overlap 3753233 CTGTATTTATAATAA TGTGTATTTT CAC AAAATATACA TTTTATTTTTAAAGA pyrG 3755312 - 3753699 - | CTP synthetase TERM 4428 3755501 - 3755475 - R 73 -8.2 -3.41745 | opp_overlap 3755477, overlap 3755477 CCCTTATAATACGAA TAGTATGTTTTT ATG AAAAACATACTT AATATAATATCATAT TERM 4429 3755477 - 3755499 + r 90 -10.8 -3.31537 | opp_overlap 3755475 3755477 CTTATAATACGAATA GTATGTTTTT ATG AAAAACATAC TTAATATAATATCAT TERM 4430 3755499 - 3755477 - R 90 -10.8 -3.27771 | opp_overlap 3755477, overlap 3755475 CTTATAATACGAATA GTATGTTTTT ATG AAAAACATAC TTAATATAATATCAT CKL_3716 3755876 - 3755568 - | hypothetical protein TERM 4431 3756106 - 3756086 - R 76 -6.9 -4.62622 | opp_overlap 3756086 TTAATCACAAATAAA CACAGGA AATTTAA TCCTGTG TTTTTATATTTATCT TERM 4432 3756086 - 3756106 + r 88 -6.9 -5.26155 | opp_overlap 3756086 TTAATCACAAATAAA CACAGGA AATTTAA TCCTGTG TTTTTATATTTATCT CKL_3717 3756509 - 3756096 - | hypothetical protein TERM 4433 3756660 - 3756687 + r 72 -5.8 -4.48987 | CTTTTTTCATTCCAG TACTATGTTAAT ATCT ATTAGTATAGTA TTTTAATTATACCAA TERM 4434 3756764 - 3756783 + r 72 -7.2 -4.06185 | gap 1, opp_overlap 3756764, overlap 3756757 AATACATTTAAAAAA TCACAC-CC ACA GGAGTGTGA TTTAATATTTATATG TERM 4435 3756783 - 3756764 - R 95 -8.6 -5.15381 | opp_overlap 3756764 3756757 AATACATTTAAAAAA TCACACCC ACAG GAGTGTGA TTTAATATTTATATG CKL_3718 3758162 - 3756792 - | sporulation protein TERM 4436 3757431 - 3757441 + g 77 -4 -5.45813 | AACCTCTGATACTTC TAGA TTT TCTA TTTTATTTTTTCCTA murG2 3758439 - 3759647 + | MurG2 CKL_3720 3760463 - 3759828 - | stage II sporulation protein R CKL_3721 3762783 - 3760540 - | spore germination protein CKL_3722 3764293 - 3762836 - | spore germination protein TERM 4437 3763531 - 3763500 - G 72 -6 -4.46112 | GGTGACTGAAATAAA TTTGCCATTGTAGT AGGT ACTATAACAGCAAA GGGGGAGTTATCTAC CKL_3723 3764503 - 3764309 - | hypothetical protein TERM 4438 3764622 - 3764597 - R 95 -7.7 -5.4251 | gap 1, opp_overlap 3764597 TTTATACATAAAAAA CTGCTGACA-AT ATA ATGTGCCAGCAG TGAATTAATTCATAT ispE 3765490 - 3764648 - | hypothetical protein TERM 4439 3765579 - 3765605 + r 72 -6 -4.53163 | opp_overlap 3765579 TATTTTGAAATTAAA GCTATACTTT TATTTAT GAAGTATAGC TTTTCTCCTATATCA cphA 3768237 - 3765613 - | CphA TERM 4440 3767405 - 3767421 + g 77 -4.4 -5.15526 | opp_overlap 3767405 TTAGATAATATATTA TAAGCC TCCAT GGCTTG TTTTTCATTTTGTAT cphB 3769313 - 3768525 - | CphB TERM 4441 3769515 - 3769494 - R 100 -9.5 -5.58522 | opp_overlap 3769493 TAGATAAAATAAAAA CTTCAGCAG ATCA CTACTGAAG CATAATTTTCTCAAA CKL_3727 3771106 - 3769553 - | hypothetical protein TERM 4442 3769870 - 3769890 + g 78 -6.9 -4.35116 | opp_overlap 3769868 TTTCTAAAGATATTT TCGATATAC ACT GCATATCGA TTTTACTGTCAGGTA TERM 4443 3771321 - 3771291 - R 100 -14.2 -2.85351 | opp_overlap 3771294 3771298, overlap 3771294 3771298 CCCTTTTATACCATA GAAGAAAGATGGAA GCT TGCCATCTTTCTTC TTACCCTATATATAT TERM 4444 3771294 - 3771318 + r 86 -10.1 -3.67558 | opp_overlap 3771291 3771294 3771298, overlap 3771298 TTTTATACCATAGAA GAAAGATGGAA GCT TGCCATCTTTC TTCTTACCCTATATA TERM 4445 3771318 - 3771294 - R 86 -10.1 -3.57651 | opp_overlap 3771294 3771298, overlap 3771291 3771298 TTTTATACCATAGAA GAAAGATGGAA GCT TGCCATCTTTC TTCTTACCCTATATA TERM 4446 3771403 - 3771369 - R 74 -5.1 -5.01553 | overlap 3771364 AATTCATAAACAAAA GTAGTACCCAGAACA ACCGG TGCTCTACATACTAC TTCTAAATTAAACTA CKL_3728 3771832 - 3771596 - | hypothetical protein CKL_3729 3772924 - 3772037 - | hypothetical protein TERM 4447 3773039 - 3772996 - R 95 -11.4 -4.20918 | gap 1, opp_overlap 3772996, overlap 3772999 TTTAAGTGCAAGAAA TAAGGTCTATA-CTGGATT AATTTAA AACCCAGATATAGACCTTA TTTTTTAATTCAGAT TERM 4448 3772996 - 3773039 + r 100 -9.2 -5.27477 | gap 1, opp_overlap 3772996 3772999 TTTAAGTGCAAGAAA TAAGGTCTATA-CTGGATT AATTTAA AACCCAGATATAGACCTTA TTTTTTAATTCAGAT TERM 4449 3773036 - 3772999 - R 81 -8.7 -4.2204 | gap 1, opp_overlap 3772996, overlap 3772996 AAGTGCAAGAAATAA GGTCTATA-CTGGATT AATTTAA AACCCAGATATAGACC TTATTTTTTAATTCA cotS2 3774056 - 3773049 - | CotS2 TERM 4450 3774645 - 3774627 - g 73 -7.6 -3.66166 | opp_overlap 3774629, overlap 3774625 3774623 TTTCTAAAAAAGATA TAGTTAAA TCT TTTAACTA TCCTGAAAATAAAAT CKL_3731 3774170 - 3775297 + | glycosyltransferase TERM 4451 3775571 - 3775536 - f 79 -9.4 -3.31329 | opp_overlap 3775539 3775543, overlap 3775534 3775539 CCAACTAATAAGATA TAATACATAAATAGAT ATTT ATATATTTATGTATTA TGGGAGTATACTTTA TERM 4452 3775614 - 3775629 + G 74 -6.2 -4.45083 | opp_overlap 3775614 ATACAATGCTGAAAA CTATGA ATAA TCATAG TTTTGTAGATATAAA TERM 4453 3775629 - 3775614 - g 70 -6.2 -4.16251 | opp_overlap 3775614 ATACAATGCTGAAAA CTATGA ATAA TCATAG TTTTGTAGATATAAA CKL_3732 3775586 - 3775954 + | transcriptional regulator CKL_3733 3775984 - 3777027 + | transcriptional regulator TERM 4454 3777044 - 3777067 + F 100 -8.2 -5.71712 | gap 1 TTCTCTTGCCTATGA TGCTGCCAGAG TAC CT-TGGCGGCA TTTTTTTATCTAAAA TERM 4455 3777358 - 3777346 - g 79 -2.6 -5.84381 | TCATGAAGAAAAAAA CAGG TGTTT CCCG TCTTTTAGAAATTGC TERM 4456 3779093 - 3779065 - g 100 -12.5 -5.21709 | GCTTATATCAAAAAA TGTGGCAGGCGTA TAT TACAGCTGCCACA TGGAATGTCGGGAAG CKL_3734 3777333 - 3779126 + | transport protein, ATPase and permease component TERM 4457 3779595 - 3779630 + G 77 -9.9 -2.76693 | overlap 3779605 TAGGTCTATGCTTTC TGGATATACGCATGG CACTTT CCATGTTTATATCCA TGCCTTTTGCAATTT CKL_3735 3779123 - 3780865 + | transport protein, ATPase and permease component CKL_3736 3781001 - 3783160 + | hypothetical protein TERM 4458 3783226 - 3783184 - T 95 -6.5 -5.59655 | opp_overlap 3783184, overlap 3783188 TAAATCAATAAAAAA TATACCCATTAAAATAAGT TTTAC ACTTATTTGCATGGGTGTA TTTTTTATTTTACCA TERM 4459 3783184 - 3783226 + T 100 -8.7 -5.79595 | opp_overlap 3783184 3783188 TAAATCAATAAAAAA TATACCCATTAAAATAAGT TTTAC ACTTATTTGCATGGGTGTA TTTTTTATTTTACCA TERM 4460 3783222 - 3783188 - T 71 -7.3 -3.77157 | opp_overlap 3783184, overlap 3783184 TCAATAAAAAATATA CCCATTAAAATAAGT TTTAC ACTTATTTGCATGGG TGTATTTTTTATTTT CKL_3737 3784281 - 3783259 - | spore coat protein CKL_3738 3785069 - 3784308 - | spore coat protein CKL_3739 3785301 - 3785104 - | hypothetical protein CKL_3740 3786331 - 3785324 - | spore coat protein CKL_3741 3786514 - 3787632 + | glycosyltransferase TERM 4461 3787663 - 3787717 + T 73 -8.4 -3.09968 | gap 1, opp_overlap 3787663 3787668 3787675, overlap 3787665 3787668 3787674 TCTATAACTAACTAA TATAAGCAAAAACCTTTTAACTA TTTACGCTCC TAGTTAAAAGGCTTT-GCTTATA TGTTAAAATTCCCTA TERM 4462 3787717 - 3787663 - T 88 -10.6 -3.48064 | gap 1, opp_overlap 3787663 3787665 3787668 3787674, overlap 3787668 3787675 TCTATAACTAACTAA TATAAGCAAAAACCTTTTAACTA TTTACGCTCC TAGTTAAAAGGCTTT-GCTTATA TGTTAAAATTCCCTA TERM 4463 3787706 - 3787675 - T 80 -6.1 -4.99056 | opp_overlap 3787674 3787668 3787665 3787663, overlap 3787668 3787663 TAATATAAGCAAAAA CCTTTTAACTA TTTACGCTCC TAGTTAAAAGG CTTTGCTTATATGTT CKL_3742 3789135 - 3787870 - | solute-binding protein CKL_3743 3790621 - 3789239 - | hypothetical protein TERM 4464 3789382 - 3789399 + g 72 -3.3 -5.26316 | gap 1, overlap 3789385 3789386 TCTCTGCTCCTTCAT CTGTGGGC CTT GCCC-CTG TTTTTTCTGCAATAC TERM 4465 3789386 - 3789396 + g 70 -8.2 -3.14801 | overlap 3789385 3789382 TGCTCCTTCATCTGT GGGC CTT GCCC CTGTTTTTTCTGCAA TERM 4466 3791238 - 3791222 - g 78 -2.1 -5.72053 | overlap 3791224 GAACGAAATAAAAAA CTTGACC AAC GGTCCGG GCAAATTATGCAAGG CKL_3744 3790827 - 3791441 + | 3-methyladenine DNA glycosylase CKL_3745 3791463 - 3791738 + | hypothetical protein manC 3792847 - 3791780 - | ManC TERM 4467 3791813 - 3791835 + g 74 -6.5 -4.37337 | opp_overlap 3791818 ATTATTTTTCTTTTT TAAAATATC CACTA GATATTTTA TTTCTTGATCTTTAT TERM 4468 3792988 - 3792949 - R 72 -7.4 -3.92324 | overlap 3792956 AAAGTATATAAAATA GAAAAAAGCATTTCAAAA TCAC TTTTGAAACACTTTTCAC CTTATAATTAGCTTT TERM 4469 3792981 - 3792956 - R 95 -6.3 -5.65678 | overlap 3792949 ATAAAATAGAAAAAA GCATTTCAAAA TCAC TTTTGAAACAC TTTTCACCTTATAAT CKL_3747 3797109 - 3793051 - | hypothetical protein TERM 4470 3795130 - 3795144 + g 74 -5.8 -4.62203 | ATAATCTTTTATAGT GTTATT CCA AATAAC TTTTAATTCTTTGAA TERM 4471 3797540 - 3797523 - g 70 -6.3 -4.21936 | opp_overlap 3797523 GCGAGAATTTCAAAA GCAATGG TATT CCATTAC TTCGGTACAAAAAAA CKL_3748 3797391 - 3798005 + | transcriptional regulator TERM 4472 3798526 - 3798554 + G 76 -6.2 -4.57341 | gap 1, opp_overlap 3798526 3798529 TGACCACCGCAAAAT CTATCTATCTGTA GTAA TACAGA-AGATGG TTTTTCCACAGACTT TERM 4473 3798638 - 3798653 + G 78 -9 -3.48924 | ATCGATGCAAGTTTT GGGCTT GGGG AAGCCC TTGTATCCGGCATAG CKL_3749 3798002 - 3800626 + | phosphoenolpyruvate synthase TERM 4474 3800715 - 3800773 + T 100 -12.1 -4.66609 | gap 1, opp_overlap 3800732, overlap 3800716 3800721 3800722 ATTTCATGCCTTATT CATATGT-TACCTTGAAAGACCAGCAAA TTAA TTTGCTGGTCTTTCAAGGTATATTAATA TTTTTAAATCAAATG TERM 4475 3800716 - 3800771 + T 100 -15 -3.94812 | opp_overlap 3800732, overlap 3800715 3800721 3800722 TTTCATGCCTTATTC ATATGTTACCTTGAAAGACCAGCAAA TTAA TTTGCTGGTCTTTCAAGGTATATTAA TATTTTTAAATCAAA TERM 4476 3800721 - 3800767 + T 100 -22.1 -3.61527 | gap 1, opp_overlap 3800732, overlap 3800716 3800715 3800722 TGCCTTATTCATATG T-TACCTTGAAAGACCAGCAAA TTAA TTTGCTGGTCTTTCAAGGTATA TTAATATTTTTAAAT TERM 4477 3800722 - 3800765 + T 100 -27.2 -3.37164 | opp_overlap 3800732, overlap 3800721 3800716 3800715 GCCTTATTCATATGT TACCTTGAAAGACCAGCAAA TTAA TTTGCTGGTCTTTCAAGGTA TATTAATATTTTTAA TERM 4478 3800755 - 3800732 - T 100 -14 -3.57462 | opp_overlap 3800722 3800721 3800716 3800715 TATGTTACCTTGAAA GACCAGCAAA TTAA TTTGCTGGTC TTTCAAGGTATATTA CKL_3750 3801411 - 3800803 - | hypothetical protein CKL_3751 3802548 - 3801550 - | transcriptional regulator ileS 3805719 - 3802615 - | isoleucyl-tRNA synthetase TERM 4479 3802725 - 3802737 + g 75 -4.9 -5.12617 | GAGTTTCTTTTTTAA TTTGA GCT TCAAA TTTTTTAACTACTTC TERM 4480 3803247 - 3803263 + g 74 -2.9 -5.48063 | CACTTATGAGCATTT CAGATAG AGG CTGCCTG TTTTTTATATTAGCT TERM 4481 3803548 - 3803558 + g 71 -6.8 -4.02532 | TGCCAATTCTTCATT CCAG AAT CTGG TTCTATTTCTTCTTA TERM 4482 3803789 - 3803776 - G 71 -5.3 -4.60143 | ATAGAGCACATAAAA GGAAT ATAC ATTCC AAAGTGTACCTAAAA TERM 4483 3803890 - 3803879 - G 70 -4.4 -4.82901 | opp_overlap 3803888 3803888 CTTTCTGTATAAAAA TACC ATCT GGTA GCATCTGCTCCTTCA TERM 4484 3805879 - 3805859 - R 100 -7.6 -5.88565 | opp_overlap 3805859, overlap 3805875 TTTACAATAAAAAAA CTTCATCC AAATA GGACGAAG TTAAATTCGCTATAC CKL_3753 3807973 - 3806174 - | hypothetical protein TERM 4485 3808107 - 3808072 - H 70 -2 -5.5208 | opp_overlap 3808072 TTATAATATAAAAAA GGTTAATTTTATAGAT TTTT ATAAATAAAGTTAACC TCATTTAAATATCAA TERM 4486 3808388 - 3808374 - g 71 -2.2 -5.43553 | ACTGAAAAAATAAAA TATAAA CAT CTTATA AACACTGTAGGCTCC TERM 4487 3808496 - 3808481 - g 76 -3.4 -5.36314 | TAAAAGAGGAAAAAA TATAAT ATTT ATTATA GAAATGGATAGGTAT CKL_3754 3808200 - 3808832 + | hydrolase TERM 4488 3808896 - 3808867 - T 86 -6 -5.37593 | opp_overlap 3808867 3808862, overlap 3808860 TTTTAAATGAAAAAA TTTCTAAAAATT ATTTTA AATCTTTAGAAA TTTTAATTGTGTTCC CKL_3755 3809264 - 3808899 - | transcriptional regulator nrdG 3809823 - 3809299 - | hypothetical protein nrdD 3812081 - 3809976 - | anaerobic ribonucleoside triphosphate reductase TERM 4489 3811653 - 3811676 + g 74 -6 -4.57304 | overlap 3811654 TTTTGCTAAATATTT CGGCATAGTC CCCA GATTATGCCA TTTATTTGATTCACT TERM 4490 3811654 - 3811675 + g 78 -9.5 -3.33298 | overlap 3811653 TTTGCTAAATATTTC GGCATAGTC CCCA GATTATGCC ATTTATTTGATTCAC CKL_3758 3812831 - 3812643 - | ferredoxin CKL_3759 3813831 - 3812992 - | hypothetical protein CKL_3760 3814721 - 3814125 - | hypothetical protein CKL_3761 3816033 - 3814726 - | hypothetical protein TERM 4491 3814980 - 3814964 - G 75 -8.1 -3.59023 | opp_overlap 3814958, overlap 3814958 TTTATATAAGGATAA TATCCTA TCA TAGGATA GTAAACTAGGGCATA ksgA 3816970 - 3816125 - | dimethyladenosine transferase CKL_3763 3817523 - 3816963 - | hypothetical protein TERM 4492 3817584 - 3817567 - R 100 -7.7 -5.83211 | CATCAAAAGAAAAAA TAGGAGC ACGT GCCCCTA ATCCATAACATAAAC CKL_3764 3818658 - 3817582 - | hypothetical protein CKL_3765 3819771 - 3819004 - | deoxyribonuclease metS 3821847 - 3819913 - | methionyl-tRNA synthetase TERM 4493 3821923 - 3821893 - R 100 -17.2 -5.95286 | ATTAAAAATAAAAAA CCTCTATATGAAAA CTT TTTTCATATAGAGG CATAAAATACGCTTT CKL_3767 3822763 - 3822185 - | Phage-related DNA polymerase CKL_3768 3823370 - 3822852 - | spore maturation protein B CKL_3769 3823966 - 3823391 - | spore maturation protein A CKL_3770 3824251 - 3824493 + | metal-binding protein TERM 4494 3824522 - 3824551 + T 72 -3.7 -5.2015 | opp_overlap 3824522 AGAATAAATAAAAAA TCACTATGAAA CTTAATTA TCTCATAGTGA TTTTTATATTATTAA TERM 4495 3824551 - 3824522 - T 100 -6.6 -5.82036 | opp_overlap 3824522 AGAATAAATAAAAAA TCACTATGAAAC TTAATT ATCTCATAGTGA TTTTTATATTATTAA CKL_3771 3826064 - 3824571 - | hydrolase CKL_3772 3826927 - 3826100 - | deacetylase TERM 4496 3827310 - 3827264 - H 100 -13.7 -4.50358 | gap 1, opp_overlap 3827281, overlap 3827266 3827302 ACCTAAATATGAAAA TATACTACTATTTTAAATAAAT ATAT ATTTATTTAAAATAGTAGTA-A CTAAATCACACCTAT TERM 4497 3827309 - 3827266 - H 100 -18.8 -3.85133 | opp_overlap 3827281, overlap 3827264 3827302 CTAAATATGAAAATA TACTACTATTTTAAATAAAT ATAT ATTTATTTAAAATAGTAGTA ACTAAATCACACCTA TERM 4498 3827444 - 3827420 - H 100 -10.2 -5.0538 | opp_overlap 3827420 TTTTATCTCAAAAAA TTAAGAGGAA TACCT TTCCTCTTAA TTTCTTTAATTTACT TERM 4499 3827420 - 3827444 + H 100 -10.2 -4.63675 | opp_overlap 3827420 TTTTATCTCAAAAAA TTAAGAGGAA TACCT TTCCTCTTAA TTTCTTTAATTTACT CKL_3773 3827578 - 3827739 + | hypothetical protein TERM 4500 3827739 - 3827755 + F 83 -5.1 -5.69793 | TCGTTATATATCCTA GGTGC TGATGAC GCACC TTTTTTATTTCATAT ispF 3827803 - 3828297 + | hypothetical protein CKL_3775 3828975 - 3828379 - | hypothetical protein TERM 4501 3829109 - 3829083 - H 75 -5.3 -4.87273 | opp_overlap 3829072 3829070 3829083 3829101, overlap 3829072 3829070 3829101 AACATTCTATAAAAA TCTAAGATTTT ATTAG AATATCTTAGA TATATGGTATTATTA CKL_3776 3829290 - 3829940 + | hypothetical protein CKL_3777 3829958 - 3830608 + | transcriptional regulator CKL_3778 3830617 - 3831270 + | hypothetical protein TERM 4502 3831335 - 3831311 - T 74 -6.5 -4.53648 | opp_overlap 3831311 CACAGAAAACATAAA GTTATCAACAA TTT CTGTGGATAAC TTATACATACTACAT TERM 4503 3831392 - 3831362 - T 100 -11.5 -4.71222 | opp_overlap 3831367, overlap 3831387 3831390 ACATCAAAATTAAAA GAATACTTATTTA TATTG TAAATAAGTATTC AGACTGCTGACAAAC TERM 4504 3831426 - 3831458 + T 100 -13.7 -5.22312 | opp_overlap 3831390 3831387 3831430, overlap 3831430 TTTTGTCAATACTCT GAAACCCATATGTTT TAA AAACATATGGGTTTA TTTTTTAGTATAACT TERM 4505 3831454 - 3831430 - T 100 -14.5 -3.6106 | opp_overlap 3831426 3831430 GTCAATACTCTGAAA CCCATATGTTT TAA AAACATATGGG TTTATTTTTTAGTAT TERM 4506 3831430 - 3831454 + T 100 -14.5 -5.10526 | opp_overlap 3831430, overlap 3831426 GTCAATACTCTGAAA CCCATATGTTT TAA AAACATATGGG TTTATTTTTTAGTAT TERM 4507 3831650 - 3831614 - T 80 -9.9 -2.91913 | opp_overlap 3831601 3831617, overlap 3831601 3831617 3831644 AATATATAGACTATA TAATTAATTTTAAATTA TTA TCATTTAAAATTAATTA TTAAAAAATTATAAT TERM 4508 3831855 - 3831843 - T 72 -3.5 -5.24291 | AAAATGAAAAGAAAA TAAAA TAA TTTTA AGCAAAAAGGGTAAC CKL_3779 3832598 - 3831921 - | transposase TERM 4509 3833036 - 3832991 - H 76 -3.8 -5.48787 | gap 2, overlap 3832995 ACAAGATATAAAAAA TA-AATAAGTCTATAGC-AGTT ATTT AACTTACTATAAACTTATTATA CGAGGAGTGATAATT TERM 4510 3833031 - 3832995 - H 82 -6.2 -5.16969 | gap 1, overlap 3832991 GATATAAAAAATAAA TAAGTCTATAGC-AGTT ATTT AACTTACTATAAACTTA TTATACGAGGAGTGA CKL_3780 3833052 - 3833192 + | rubredoxin-related protein rbo 3833266 - 3833640 + | superoxide reductase-like protein rbr2 3833662 - 3834246 + | Rbr2 TERM 4511 3834307 - 3834250 - T 100 -29.7 -3.27544 | opp_overlap 3834258, overlap 3834251 3834258 GAAAACTATTAGTAA CTTCAAAAGGAGCGTTGAAACCTACTT TAAA AAGTGGGTTTCAACGCTCCTTTTGAAA TCAATCTAAATACTT TERM 4512 3834306 - 3834251 - T 100 -31 -2.55803 | opp_overlap 3834258, overlap 3834250 3834258 AAAACTATTAGTAAC TTCAAAAGGAGCGTTGAAACCTACTT TAAA AAGTGGGTTTCAACGCTCCTTTTGAA ATCAATCTAAATACT TERM 4513 3834258 - 3834299 + T 100 -25.5 -4.15006 | opp_overlap 3834251 3834250 3834258 TTAGTAACTTCAAAA GGAGCGTTGAAACCTACTT TAAA AAGTGGGTTTCAACGCTCC TTTTGAAATCAATCT TERM 4514 3834299 - 3834258 - T 100 -23.3 -4.20696 | opp_overlap 3834258, overlap 3834251 3834250 TTAGTAACTTCAAAA GGAGCGTTGAAACCTACTT TAAA AAGTGGGTTTCAACGCTCC TTTTGAAATCAATCT TERM 4515 3834318 - 3834342 + T 70 -5.9 -4.33004 | opp_overlap 3834318, overlap 3834314 3834315 TGAAATCAATCTAAA TACTTATTTAT ATC GTAAATGAGTA TTCTTTTAATTAAGT CKL_3783 3835751 - 3834357 - | tRNA nucleotidyltransferase-related protein TERM 4516 3835858 - 3835838 - H 71 -8.5 -2.92038 | opp_overlap 3835838, overlap 3835833 TTTAAAATTAGTATA TCTAAAATA ATT TATTTTAGA TTTCGACATATAATA TERM 4517 3835838 - 3835858 + H 76 -8.5 -3.59738 | opp_overlap 3835838 3835833 TTTAAAATTAGTATA TCTAAAATA ATT TATTTTAGA TTTCGACATATAATA CKL_3784 3836141 - 3836386 + | transcriptional regulator TERM 4518 3836402 - 3836425 + T 100 -8.2 -5.7827 | opp_overlap 3836402 CAATCACATAAAAAA CTGACATCGA AATT TAGATGTCAG TTTTTTATTTCTCTT TERM 4519 3836425 - 3836402 - T 95 -8.2 -5.42131 | opp_overlap 3836402 CAATCACATAAAAAA CTGACATCGA AATT TAGATGTCAG TTTTTTATTTCTCTT CKL_3785 3837639 - 3836551 - | hypothetical protein TERM 4520 3837787 - 3837748 - R 100 -10.4 -4.86731 | opp_overlap 3837748 3837749, overlap 3837749 CTCCTTTAAACAAAA CTTAAAACCATACCTAAT TGAT ATTAAGTATAGTTTTAAA TTTAACATGTGTATA TERM 4521 3837786 - 3837749 - R 95 -11.7 -3.51557 | opp_overlap 3837749 3837748, overlap 3837748 TCCTTTAAACAAAAC TTAAAACCATACCTAAT TGAT ATTAAGTATAGTTTTAA ATTTAACATGTGTAT CKL_3786 3838827 - 3837988 - | methyltransferase CKL_3787 3839583 - 3838843 - | methyltransferase TERM 4522 3839691 - 3839670 - R 84 -6.6 -5.04597 | opp_overlap 3839670 ATTTACATATAAAAA TTCCAGGA GTATAA TCCCGGAA TTTTTGAGTGCTATA motB 3840476 - 3839712 - | hypothetical protein motA 3841267 - 3840473 - | hypothetical protein TERM 4523 3841504 - 3841474 - R 100 -12.8 -4.0896 | opp_overlap 3841481 3841483 3841497, overlap 3841481 AAACTTGTCCCAAAA TTAAAAAGACTACC CTA GGCAGCCTTTTTAA AAGTAATTCTAATCA TERM 4524 3841497 - 3841481 - R 82 -6.5 -5.0925 | opp_overlap 3841481 3841483, overlap 3841474 TCCCAAAATTAAAAA GACTACC CTA GGCAGCC TTTTTAAAAGTAATT CKL_3790 3841699 - 3841526 - | ferredoxin CKL_3791 3841992 - 3841789 - | hypothetical protein CKL_3792 3842909 - 3842004 - | peptidase TERM 4525 3842817 - 3842828 + g 81 -3 -5.88197 | AGCCGTTTCCACTAT TATG TTGT CATA TTTTTTTATATTTAA CKL_3793 3843861 - 3842917 - | DNA polymerase III subunit delta' TERM 4526 3843632 - 3843645 + g 90 -3.9 -5.93252 | ATATATTTTATTTCT TCTAT ACCA ATAGA TTTTTTATTTTTAAA CKL_3794 3844206 - 3843877 - | hypothetical protein tmk 3845019 - 3844333 - | hypothetical protein TERM 4527 3844536 - 3844549 + g 74 -5.3 -4.82667 | TAAATTTATTATTCC TCTCA ATCA TGAGA TTTTTACTATACTCA speA2 3846478 - 3845039 - | SpeA2 TERM 4528 3845403 - 3845389 - G 71 -2.2 -5.4588 | TAAAAGGAGAAAAAA TTAATA TTA CATTAA AGTTATCACTCATCT CKL_3797 3846669 - 3846457 - | hypothetical protein TERM 4529 3846747 - 3846766 + H 74 -2.2 -5.61277 | GCCTTTTAATGTATA TAATATTC AATT GAATTTTA TTTTATTTTTTTATC TERM 4530 3847123 - 3847109 - g 90 -4.2 -5.94597 | opp_overlap 3847108 3847109 TAATATCAAAAAAAA CTGGTG TTT CACTAG ATTTTTTAAGAGCTG TERM 4531 3847597 - 3847615 + G 83 -10.4 -3.04248 | opp_overlap 3847597, overlap 3847587 3847585 3847599 GAGCTTTTACAAAAA TATCCTGA AGA TCAGGATA TCTTAGAAGATGTTA TERM 4532 3847615 - 3847597 - g 100 -10.4 -4.83615 | opp_overlap 3847597 3847587 3847585 3847599 GAGCTTTTACAAAAA TATCCTGA AGA TCAGGATA TCTTAGAAGATGTTA TERM 4533 3847599 - 3847613 + G 72 -8.6 -3.07522 | opp_overlap 3847597, overlap 3847597 3847587 3847585 GCTTTTACAAAAATA TCCTGA AGA TCAGGA TATCTTAGAAGATGT TERM 4534 3847777 - 3847793 + G 83 -8.1 -4.29302 | ATAGTTATGTCTATA CCAAATA TAA TATTTGG TTCTTTTGGTATGAA CKL_3798 3846982 - 3847923 + | transporter protein TERM 4535 3847991 - 3847966 - g 100 -12.7 -4.98758 | AAAAAGTTAGAAAAA GGAGATACGAT AGGA ATCGTATCCCC TTCAAGCAGTGAGGA CKL_3799 3847942 - 3848856 + | hypothetical protein CKL_3800 3849019 - 3849762 + | foldase-related protein npdA 3849993 - 3850718 + | NAD-dependent deacetylase TERM 4536 3850735 - 3850698 - T 100 -11.7 -4.38171 | opp_overlap 3850699 3850708, overlap 3850699 3850708 GACAGCATAGGAAAA GTTTTAAAAAGTATACT TTAA AGTATACTTTTTAAAAT GCTTGTTTCAGCGAT TERM 4537 3850734 - 3850699 - T 100 -15.2 -3.2218 | opp_overlap 3850699 3850708, overlap 3850698 3850708 ACAGCATAGGAAAAG TTTTAAAAAGTATACT TTAA AGTATACTTTTTAAAA TGCTTGTTTCAGCGA TERM 4538 3850699 - 3850734 + T 100 -15.2 -3.02371 | opp_overlap 3850699 3850698 3850708, overlap 3850708 ACAGCATAGGAAAAG TTTTAAAAAGTATACT TTAA AGTATACTTTTTAAAA TGCTTGTTTCAGCGA TERM 4539 3850725 - 3850708 - T 81 -7.1 -4.66264 | opp_overlap 3850699 3850708, overlap 3850699 3850698 GAAAAGTTTTAAAAA GTATACT TTAA AGTATAC TTTTTAAAATGCTTG TERM 4540 3850708 - 3850725 + T 81 -7.1 -4.64598 | opp_overlap 3850708 3850699 3850698, overlap 3850699 GAAAAGTTTTAAAAA GTATACT TTAA AGTATAC TTTTTAAAATGCTTG TERM 4541 3850778 - 3850756 - T 100 -9.3 -4.87665 | opp_overlap 3850756 3850761 TTTCAGCGATAAAAA TAGAATGTC AATAA GACATTCTA TTTAAAACATATCCG TERM 4542 3850756 - 3850778 + T 84 -9.3 -3.56643 | opp_overlap 3850756, overlap 3850761 TTTCAGCGATAAAAA TAGAATGTC AATAA GACATTCTA TTTAAAACATATCCG TERM 4543 3853276 - 3853263 - T 71 -4.5 -4.82901 | opp_overlap 3853263 CTCGTTCTACAAAAA GCACG CCGT CGTAC TTTAACGTACTTCGA TERM 4544 3853329 - 3853340 + T 75 -7.2 -4.2354 | AGGTTCTATTTCACT CCCC TCCC GGGG TTCTTTTCACCTTTC TERM 4545 3853403 - 3853418 + T 81 -10.4 -2.71011 | GTAGTATTTAGCCTT GGGAGG TGGT CCTCCC TGCTTCCCACAAGGT TERM 4546 3853569 - 3853586 + T 86 -9.9 -3.695 | CACCTGACCTCTACC CCGGAAA CAAG TTTCCGG TTTGGGCTCTTTCCC TERM 4547 3853901 - 3853923 + T 80 -8.5 -3.90856 | gap 1, opp_overlap 3853897, overlap 3853904 GGTGCCTAAATTGCA CTC-CTCAGC CTTA GCTGAGTGAG TTTCATTAAAAAATT TERM 4548 3853904 - 3853919 + T 73 -9 -2.70979 | opp_overlap 3853897, overlap 3853901 GCCTAAATTGCACTC CTCAGC CTTA GCTGAG TGAGTTTCATTAAAA TERM 4549 3854146 - 3854123 - T 72 -6.2 -4.27617 | TACATCTTATTAAAA TAAGCATAAA CTCA TTTATACTTA TCCACTACAAAGGTT TERM 4550 3854370 - 3854386 + T 73 -4.3 -5.01732 | overlap 3854381 TATTTATCTCAAATT CCAGCTT TTA AGGCAGG TTTTTTCCCAGCCTT TERM 4551 3854429 - 3854448 + T 73 -9.2 -2.65808 | opp_overlap 3854420 3854417, overlap 3854426 3854426 AAAGGAGGTGATCCA GCCGCAGG TTCT CCTACGGC TACCTTGTTACGACT TERM 4552 3855324 - 3855343 + T 71 -7.8 -3.64371 | gap 1, overlap 3855325 AGTTTGAAATGCACT G-CCCGGGT TAA GCCCGGGTC TTTCACATCTCACTT TERM 4553 3855325 - 3855341 + T 93 -11.5 -3.39844 | overlap 3855324 GTTTGAAATGCACTG CCCGGGT TAA GCCCGGG TCTTTCACATCTCAC TERM 4554 3856660 - 3856621 - T 70 -6.7 -3.90744 | gap 1, opp_overlap 3856624 3856625, overlap 3856618 3856624 3856625 TTTTCCCCTAAAGAA TAAC-GTATTCTAAGTGC TAAAG ACACTAAGAATACTGTTA ATAAGGCCCATATGT CKL_3805 3857860 - 3856712 - | aminotransferase TERM 4555 3857886 - 3857907 + H 81 -3.1 -5.86061 | overlap 3857874 3857889 TCTTTAAAATAATTT TAGTAGTAT TATA ATACTATTG TTTTTTTTAATAAAA TERM 4556 3857889 - 3857904 + H 72 -4.8 -4.99643 | overlap 3857886 TTAAAATAATTTTAG TAGTAT TATA ATACTA TTGTTTTTTTTAATA TERM 4557 3857911 - 3857946 + H 86 -9.4 -3.84852 | opp_overlap 3857923 3857940, overlap 3857940 ATAATACTATTGTTT TTTTTAATAAAATGTA CGGA TACAATTTATTAAAAA TTAATTTTATATTTG CKL_3806 3858017 - 3858613 + | Uracil DNA glycosylase-related protein CKL_3807 3859047 - 3858610 - | hypothetical protein CKL_3808 3860012 - 3859059 - | hydrolase TERM 4558 3859695 - 3859677 - G 77 -8.2 -3.9534 | ACCTATATCCACAAA GACACCTT TTG AAGATGTC CATACTTTACCCAGT CKL_3809 3861054 - 3860035 - | hydrolase CKL_3810 3862076 - 3861045 - | hydrolase TERM 4559 3862271 - 3862235 - R 100 -13.3 -5.00616 | opp_overlap 3862238 3862241, overlap 3862218 3862238 TTTTTTTCTAAAAAA TAATAAGGAAGCATATC AAT AATATGCTTCCTTATTG GTGGCTCACCGGGGA TERM 4560 3862238 - 3862268 + r 100 -14.3 -3.18264 | opp_overlap 3862235 3862238, overlap 3862241 TTTTCTAAAAAATAA TAAGGAAGCATAT CAATA ATATGCTTCCTTA TTGGTGGCTCACCGG TERM 4561 3862268 - 3862238 - R 100 -15 -4.61482 | opp_overlap 3862238 3862241, overlap 3862235 TTTTCTAAAAAATAA TAAGGAAGCATATC AAT AATATGCTTCCTTA TTGGTGGCTCACCGG TERM 4562 3862241 - 3862265 + r 93 -11.6 -3.73647 | opp_overlap 3862238 3862235, overlap 3862238 TCTAAAAAATAATAA GGAAGCATAT CAATA ATATGCTTCC TTATTGGTGGCTCAC TERM 4563 3864840 - 3864827 - R 71 -4.5 -4.82901 | opp_overlap 3864827 CTCGTTCTACAAAAA GCACG CCGT CGTAC TTTAACGTACTTCGA TERM 4564 3864893 - 3864904 + r 75 -7.2 -4.2354 | AGGTTCTATTTCACT CCCC TCCC GGGG TTCTTTTCACCTTTC TERM 4565 3864967 - 3864982 + r 81 -10.4 -2.71011 | GTAGTATTTAGCCTT GGGAGG TGGT CCTCCC TGCTTCCCACAAGGT TERM 4566 3865133 - 3865150 + r 86 -9.9 -3.695 | CACCTGACCTCTACC CCGGAAA CAAG TTTCCGG TTTGGGCTCTTTCCC TERM 4567 3865465 - 3865487 + r 80 -8.5 -3.90856 | gap 1, opp_overlap 3865461, overlap 3865468 GGTGCCTAAATTGCA CTC-CTCAGC CTTA GCTGAGTGAG TTTCATTAAAAAATT TERM 4568 3865468 - 3865483 + r 73 -9 -2.70979 | opp_overlap 3865461, overlap 3865465 GCCTAAATTGCACTC CTCAGC CTTA GCTGAG TGAGTTTCATTAAAA TERM 4569 3865710 - 3865687 - R 72 -6.2 -4.27617 | TACATCTTATTAAAA TAAGCATAAA CTCA TTTATACTTA TCCACTACAAAGGTT TERM 4570 3865934 - 3865950 + r 73 -4.3 -5.01732 | overlap 3865945 TATTTATCTCAAATT CCAGCTT TTA AGGCAGG TTTTTTCCCAGCCTT TERM 4571 3865993 - 3866012 + r 73 -9.2 -2.65808 | opp_overlap 3865984 3865981, overlap 3865990 3865990 AAAGGAGGTGATCCA GCCGCAGG TTCT CCTACGGC TACCTTGTTACGACT TERM 4572 3866888 - 3866907 + r 71 -7.8 -3.64371 | gap 1, overlap 3866889 AGTTTGAAATGCACT G-CCCGGGT TAA GCCCGGGTC TTTCACATCTCACTT TERM 4573 3866889 - 3866905 + r 93 -11.5 -3.39844 | overlap 3866888 GTTTGAAATGCACTG CCCGGGT TAA GCCCGGG TCTTTCACATCTCAC TERM 4574 3868171 - 3868136 - R 70 -5 -4.64361 | opp_overlap 3868136 3868164, overlap 3868164 CAAAAAACACTAAAA GATATAAAAATTTACC TAGA AATAAATTTATATATC TTTACATATATACTT CKL_3815 3869463 - 3868216 - | hypothetical protein CKL_3816 3870418 - 3869486 - | phosphoglycerate dehydrogenase CKL_3817 3871508 - 3870438 - | aminotransferase TERM 4575 3871622 - 3871591 - R 100 -16 -5.22137 | opp_overlap 3871598 AAGTATAAAACAAAA GAGCCAATCATCCC TTTA GGGACGATTGACTC GCGTTGCCACCCTTA TERM 4576 3871855 - 3871828 - R 95 -5.6 -5.80817 | gap 1, overlap 3871837 TTTAATATAAAAAAA CCAATCAAACCCT CTT AGGGAC-GATTGG CTCGCGTTACCACCC TERM 4577 3871847 - 3871837 - R 72 -6.8 -4.1144 | overlap 3871828 AAAAAACCAATCAAA CCCT CTT AGGG ACGATTGGCTCGCGT TERM 4578 3871921 - 3871911 - R 74 -6.8 -4.26327 | overlap 3871908 CACTCATTAAAATAA CGGA TTT TCCG TACTACTCATCGCAG CKL_3818 3872331 - 3872146 - | hypothetical protein CKL_3819 3873166 - 3872384 - | hypothetical protein CKL_3820 3873950 - 3873267 - | hypothetical protein CKL_3821 3874525 - 3874007 - | pyrophosphatase-related protein sfsA 3875361 - 3874669 - | sugar fermentation stimulation protein A TERM 4579 3875627 - 3875601 - R 78 -2.4 -5.88565 | opp_overlap 3875601 TTGATAATAAAAAAA CTTCATCT AGAAAGTAAAA AGATGAAG ATTTTATACACTAAA CKL_3823 3875904 - 3875647 - | hypothetical protein CKL_3824 3876321 - 3876034 - | hypothetical protein recR 3876993 - 3876397 - | recombination protein RecR TERM 4580 3876682 - 3876662 - G 86 -11.3 -2.90763 | opp_overlap 3876660 GCCATAGGTGATATA TTACCATGT AAT ACATGGTAA ACTCCATTATATTCT TERM 4581 3877008 - 3877041 + r 71 -7.5 -3.58037 | opp_overlap 3877014 3877015, overlap 3877015 TAGGATCACCTCAAT TATAAAGCCCCATCT TAAA AGATGGGGTTGTAAA TTTAAAACATTCCTG TERM 4582 3877035 - 3877014 - R 80 -8.7 -4.0616 | opp_overlap 3877008 3877015, overlap 3877015 CACCTCAATTATAAA GCCCCATCT TAAA AGATGGGGT TGTAAATTTAAAACA TERM 4583 3877034 - 3877015 - R 95 -12.2 -3.03214 | opp_overlap 3877008 3877015, overlap 3877014 ACCTCAATTATAAAG CCCCATCT TAAA AGATGGGG TTGTAAATTTAAAAC TERM 4584 3877015 - 3877034 + r 95 -12.2 -3.47349 | opp_overlap 3877015 3877014, overlap 3877008 ACCTCAATTATAAAG CCCCATCT TAAA AGATGGGG TTGTAAATTTAAAAC CKL_3826 3877387 - 3877043 - | hypothetical protein dnaX 3879129 - 3877468 - | DNA polymerase III subunits gamma and tau TERM 4585 3879207 - 3879192 - R 88 -5.4 -5.60689 | opp_overlap 3879192 TTATATAATAAAAAA GACACC TCAT GGTATC TTTAAATGCAAATTA TERM 4586 3879646 - 3879624 - R 75 -9.4 -2.55238 | opp_overlap 3879627, overlap 3879616 3879623 3879620 ATGAAAATAAATTAG GTATTTAATT TAA AATTAAATAC TTCAACAGAACAATC TERM 4587 3879781 - 3879744 - R 81 -7.2 -4.65838 | opp_overlap 3879744 3879750, overlap 3879750 TACATATTGTAAAAA TAAAAACTGAGATATC TCTTAG GATTTCCCAGTCTTTA ATTTACCATTGTTGA TERM 4588 3879775 - 3879750 - R 80 -4 -5.61881 | opp_overlap 3879750 3879744, overlap 3879744 TTGTAAAAATAAAAA CTGAGATATC TCTTAG GATTTCCCAG TCTTTAATTTACCAT hydG 3881241 - 3879814 - | thiamine biosynthesis protein ThiH TERM 4589 3881360 - 3881330 - R 100 -14.9 -5.52079 | ATATTAAAATAAAAA CTCCCTTTCCGAA ACTCA TTCAGAAAGGGAG CAAATTAGCAAAAAT TERM 4590 3881627 - 3881590 - R 79 -9.4 -3.18507 | opp_overlap 3881592 3881593 3881601, overlap 3881592 3881601 AATAGAGGGTATCAA GACGTCAATAAGTTAG TGTATT CTAACTTATTGACATT ATATAAGTTCACTGA TERM 4591 3881625 - 3881592 - R 95 -12 -3.15078 | opp_overlap 3881592 3881593 3881601, overlap 3881590 3881601 TAGAGGGTATCAAGA CGTCAATAAGTTAG TGTATT CTAACTTATTGACA TTATATAAGTTCACT TERM 4592 3881592 - 3881625 + r 86 -9.8 -3.55368 | opp_overlap 3881590 3881592 3881601, overlap 3881593 3881601 TAGAGGGTATCAAGA CGTCAATAAGTTAG TGTATT CTAACTTATTGACA TTATATAAGTTCACT TERM 4593 3881593 - 3881624 + r 100 -13.3 -2.72739 | opp_overlap 3881592 3881590 3881601, overlap 3881592 3881601 AGAGGGTATCAAGAC GTCAATAAGTTAG TGTATT CTAACTTATTGAC ATTATATAAGTTCAC CKL_3830 3882352 - 3881738 - | methyltransferase TERM 4594 3881887 - 3881901 + g 72 -7.2 -3.91084 | GGGACCATTGATCAT TTTCAG AAT CTGAAA TTTCATTACAAATCA TERM 4595 3883837 - 3883825 - gH 74 -7.7 -3.85698 | opp_overlap 3883816 CTCGGTTTTGATAAA GACCA TCT TGGTC AGATTGTGATCGTGG CKL_3831 3883414 - 3883908 + | hypothetical protein CKL_3832 3883868 - 3884347 + | hypothetical protein TERM 4596 3884540 - 3884526 - g 73 -7.8 -3.73224 | GCATTTGCTATTAAA GCCTGC AAG GCAGAC AACGAACATGCCGTA CKL_3833 3884340 - 3884795 + | hypothetical protein TERM 4597 3884811 - 3884839 + F 83 -10.3 -2.83403 | opp_overlap 3884811 3884812, overlap 3884810 TTATGAATTAAGGAA TGTGGTGAACGCA ATA TGCGTTTGCCACC CTTTCCTCCAGCGGC TERM 4598 3884838 - 3884812 - f 75 -9.4 -2.67613 | opp_overlap 3884811 3884810, overlap 3884811 TATGAATTAAGGAAT GTGGTGAACGCA ATA TGCGTTTGCCAC CCTTTCCTCCAGCGG TERM 4599 3884955 - 3884909 - g 70 -8.4 -3.04075 | opp_overlap 3884917 3884921, overlap 3884917 AATACAGCAAATAAC TAAAAAAATAAAGCTGAAAA GATTAGA CTTTCAGCTTTATTTTCATA CTATAAGATTGTGTC TERM 4600 3884947 - 3884917 - g 100 -7.8 -5.73672 | opp_overlap 3884917 3884921, overlap 3884909 AAATAACTAAAAAAA TAAAGCTGAAAA GATTAGA CTTTCAGCTTTA TTTTCATACTATAAG TERM 4601 3884917 - 3884947 + G 76 -7.1 -4.33274 | opp_overlap 3884917 3884909, overlap 3884921 AAATAACTAAAAAAA TAAAGCTGAAA AGATTAGAC TTTCAGCTTTA TTTTCATACTATAAG CKL_3834 3884826 - 3884975 + | hypothetical protein CKL_3835 3886135 - 3885005 - | protease-related protein CKL_3836 3886878 - 3886132 - | hypothetical protein TERM 4602 3887981 - 3887992 + G 72 -7.2 -3.9243 | GTATCCAATCCTTTT CCGC AATT GCGG TTATTTCGGAAATTG TERM 4603 3888362 - 3888373 + G 72 -3.6 -5.18726 | overlap 3888354 ATCGTGAGGTCTCTG TGGC AGAA GCCG TTTTTATTCTGCAAA CKL_3837 3887188 - 3888426 + | transposase TERM 4604 3888446 - 3888463 + T 73 -9.1 -2.68806 | overlap 3888443 3888442 CATTACTGCTTTTTT GACTGCC TGTG GGCGGTC TAACTTGTTGTACCC CKL_3838 3889927 - 3888500 - | hypothetical protein TERM 4605 3889752 - 3889738 - G 82 -5 -5.49234 | opp_overlap 3889738 3889740, overlap 3889740 ATATTGAAGAAAAAA CATCCA ATT TGGATA GTTTCATCTCTTCCT CKL_3839 3890128 - 3889946 - | hypothetical protein TERM 4606 3890264 - 3890252 - R 75 -7.7 -3.97602 | overlap 3890250 ACAGATTGAAAAACA GCAGA AAT TCTGC CCAAAGAGAAAAGCC TERM 4607 3890297 - 3890277 - R 77 -6.1 -4.78848 | TGCCCAAAGAGAAAA GCCGCCA GCATTTG TGGCGAC TTCACCTGCTATTTT CKL_3840 3891961 - 3890312 - | hypothetical protein TERM 4608 3890400 - 3890386 - G 74 -6.4 -4.3739 | opp_overlap 3890396, overlap 3890387 GATCTGTGGATAAAA CCACCA CCT TGGTGA TAATCCCCTTAACTA CKL_3841 3892817 - 3891966 - | hypothetical protein TERM 4609 3892115 - 3892101 - G 72 -9.2 -2.60496 | opp_overlap 3892101, overlap 3892100 TTCTTGTTCAAATAT CGCCAG TAA CCGGCG TGTTAAGTATTCCGG CKL_3842 3894388 - 3892814 - | hypothetical protein TERM 4610 3893555 - 3893540 - G 71 -9 -2.57564 | opp_overlap 3893532 3893539 3893536, overlap 3893539 CGACCGGCTGATAAT CGGTTC ATGA GAACCG GTAATGTAATAGCGG CKL_3843 3895152 - 3894781 - | recombinase-related protein CKL_3844 3895549 - 3895169 - | transcriptional regulator TERM 4611 3895744 - 3895720 - R 90 -10.7 -3.50853 | overlap 3895722 CTTCCCGAAGCAGAA CACCACAGGCA GAA TGCCTGCGGTT AAGGACGATTCCGTC TERM 4612 3895742 - 3895722 - R 100 -13.3 -3.32946 | overlap 3895720 TCCCGAAGCAGAACA CCACAGGCA GAA TGCCTGCGG TTAAGGACGATTCCG TERM 4613 3895747 - 3895760 + r 74 -8.1 -3.53091 | AATGCCTGCGGTTAA GGACG ATTC CGTCC TTTGGGCAGCCAGCT TERM 4614 3895923 - 3895941 + r 78 -8.9 -3.28791 | TCGGGTCATGGCGGG GCAATCC ACCAC GGATTGC TTCTCGGACGGACAT TERM 4615 3896173 - 3896138 - R 100 -9.8 -5.07275 | overlap 3896124 3896123 3896139 CGAGAGAGATAAAAA TCCCCCTCACTTCT ATAAAGGA AAAAGTGAGGGGGG CGATGCGCCAAAAGA TERM 4616 3896172 - 3896139 - R 100 -13.3 -3.6328 | overlap 3896124 3896123 3896138 GAGAGAGATAAAAAT CCCCCTCACTTCT ATAAAGGA AAAAGTGAGGGGG GCGATGCGCCAAAAG CKL_3845 3896602 - 3896189 - | hypothetical protein TERM 4617 3896287 - 3896326 + g 82 -10.2 -3.21099 | gap 1, overlap 3896289 TGGCAACTTGTGACT CACTTCTCTCATTGAAGAA TAT TTCGTCAATGAGAGA-GCG TTCATCCTCCGGCAA TERM 4618 3896289 - 3896325 + g 79 -10.3 -2.52516 | overlap 3896287 GCAACTTGTGACTCA CTTCTCTCATTGAAGAA TAT TTCGTCAATGAGAGAGC GTTCATCCTCCGGCA TERM 4619 3896733 - 3896696 - R 100 -11.3 -4.92239 | opp_overlap 3896696 CTAAAAACGCAAAAA GAGCGCACCAGCGGACA TAGT CGTCCGTTGATACACTC TTGTAGATATGTTCG TERM 4620 3896791 - 3896809 + r 73 -3 -5.41746 | overlap 3896784 3896793 TTGTGACCGCTCTGC GCCCATGC GCA GCATAGCC TTTTTTTGACAAGTT TERM 4621 3896870 - 3896896 + r 74 -8.6 -3.17194 | GTCCGCTTCATCACG CCCGACCGCTGC TGA GCAGTGGTCGCC TTAAGTTCAAGGCAT TERM 4622 3896956 - 3896931 - R 100 -14.1 -4.27861 | opp_overlap 3896924 3896920 3896919 AATACACATTGAAAA CCCTCCAAACT GGTG AGCTTGGAGGG TTACGATATGCTTAT TERM 4623 3897015 - 3897027 + r 70 -6.2 -4.24422 | CACGTTTTTTTTGTT GGCG GGTAG CGCC TTTCATTTATTATGA TERM 4624 3897067 - 3897049 - R 95 -7.4 -5.55664 | opp_overlap 3897049 TTATTATGAAAAAAA CCTGCC GCAAAAG GGCAGG TTTCATACGCAATCC TERM 4625 3897049 - 3897067 + r 71 -7.4 -3.73224 | opp_overlap 3897049 TTATTATGAAAAAAA CCTGCC GCAAAAG GGCAGG TTTCATACGCAATCC CKL_3846 3897554 - 3897141 - | transcriptional regulator CKL_3847 3898221 - 3897538 - | transporter protein CKL_3848 3898553 - 3898290 - | hypothetical protein TERM 4626 3898620 - 3898594 - R 71 -8.6 -2.88544 | overlap 3898607 TTCCAGTTCTACAGA GCCGGTGAAGCC ATC GCCCTCAACGGC AATATAGTTGCTGGC CKL_3849 3899031 - 3898570 - | hypothetical protein CKL_3850 3899852 - 3899028 - | transporter protein CKL_3851 3900662 - 3899868 - | transporter protein TERM 4627 3900351 - 3900327 - G 72 -8.5 -3.08679 | opp_overlap 3900327, overlap 3900313 3900312 TCCGCCGAGGGAATA GGCCACGGCGA CAA TCGCCATGACG CTGATTTTCGCCAGC CKL_3852 3901581 - 3900646 - | ABC transporter ATPase TERM 4628 3900759 - 3900746 - G 71 -5.2 -4.64676 | overlap 3900747 3900748 CCACTCTCAATAAAA GCGC GGGTGA GCGC CGTCACCGGCAAATT TERM 4629 3901703 - 3901684 - R 100 -10 -5.93809 | opp_overlap 3901684 TTGGCAGAAAAAAAA TCCCTGCC CACA GACAGGGA TTCACTCAATTTTTT CKL_3853 3902632 - 3901709 - | sensory transduction kinase TERM 4630 3901764 - 3901785 + g 100 -10.9 -5.02476 | CGGTTTGGTTCACTT TGGGCGGTA ATCT TACCGTCCA TTTTTTCGACCATCT CKL_3854 3903331 - 3902636 - | transcriptional regulator CKL_3855 3903533 - 3903354 - | transposase TERM 4631 3904070 - 3904112 + H 93 -11.4 -3.86944 | overlap 3904072 3904074 AAGCGGTGTAATGAT TGTGCCTCTTGTTGTGTAGC TGT GCTGCATGACAGGAGGTGTA TTTGATGGTTATAAC TERM 4632 3904072 - 3904110 + H 95 -11.8 -3.51793 | overlap 3904070 3904074 GCGGTGTAATGATTG TGCCTCTTGTTGTGTAGC TGT GCTGCATGACAGGAGGTG TATTTGATGGTTATA TERM 4633 3904074 - 3904108 + H 100 -14.4 -3.32233 | overlap 3904072 3904070 GGTGTAATGATTGTG CCTCTTGTTGTGTAGC TGT GCTGCATGACAGGAGG TGTATTTGATGGTTA CKL_3856 3904192 - 3905094 + | hypothetical protein CKL_3857 3905129 - 3905935 + | amidohydrolase CKL_3858 3906027 - 3906662 + | methyltransferase CKL_3859 3906827 - 3907150 + | transcriptional regulator CKL_3860 3907583 - 3907329 - | hypothetical protein CKL_3861 3909400 - 3907598 - | TraG-related protein TERM 4634 3909258 - 3909288 + g 74 -6.1 -4.37711 | gap 1, opp_overlap 3909258 CTTTCTGTGGCAAAA CGGGCGGT-ACCGT GCTG ACCGTCACCGACCG TTTTAGATTTAATGC TERM 4635 3909368 - 3909337 - G 79 -7.3 -4.45168 | gap 1 GTGCTAAAAGAGAAA GACCGCCGATGACA AAAAA CATCA-CGGCGGCC ACTGCAATTAGAATA CKL_3862 3909548 - 3910087 + | hypothetical protein TERM 4636 3910142 - 3910170 + T 89 -7.5 -5.04175 | opp_overlap 3910142 TAATAAGCAAACTGA GCATGACGGTT ACTCATC AGCTGTCATGC TTTTTATGTCATTAC CKL_3863 3911106 - 3910174 - | hypothetical protein TERM 4637 3910420 - 3910435 + g 76 -6.1 -4.69622 | CGACACACCGTTCAG CGCCA CATAAC TGGCG TTTTTCCAATTCTGT CKL_3864 3913920 - 3911122 - | hypothetical protein TERM 4638 3911797 - 3911824 + g 70 -6.2 -4.29981 | opp_overlap 3911757, overlap 3911791 3911755 CTCGTTTTTCTGCTC GGCGGCAGCTTT AAAC ATAGCTACCGTC TTTTGAATATCTTTC TERM 4639 3912841 - 3912801 - G 100 -17.7 -4.06502 | opp_overlap 3912801 CATCCTCAAATGAAA CATGGTGACTGCTTAAGCG TAA CGCTTCGGCAATCACCATG TTTTTGATACTTTTA TERM 4640 3912801 - 3912841 + g 100 -17.7 -4.86773 | opp_overlap 3912801 CATCCTCAAATGAAA CATGGTGACTGCTTAAGCG TAA CGCTTCGGCAATCACCATG TTTTTGATACTTTTA TERM 4641 3913980 - 3913957 - R 95 -8.9 -5.07652 | overlap 3913967 TTGGGCAAAAGAAAA GAGCGATCA ACTTTA TGATCGCCC TAAAGAATAAATCAT CKL_3865 3914900 - 3914016 - | transcriptional regulator TERM 4642 3914379 - 3914364 - G 76 -6.2 -4.68506 | AAGCAATTCCAAAAA TTCAGA AAGC TCTGAA GGCAAATACACATCC TERM 4643 3914963 - 3914953 - R 71 -8.2 -3.18452 | ATTATCTTAAGCCAA CCCC CAA GGGG ATAGTCAAGTACTTC TERM 4644 3915057 - 3915039 - R 100 -10.3 -5.13722 | opp_overlap 3915041 TTGAGTAAAAGAAAA GAGCGAC AACGG GTCGCTC ATTGGAATTATCCTT CKL_3866 3915452 - 3915162 - | hypothetical protein CKL_3867 3915860 - 3915531 - | hypothetical protein CKL_3868 3916465 - 3915983 - | hypothetical protein TERM 4645 3916565 - 3916542 - R 100 -12.4 -4.81551 | opp_overlap 3916541 TATGCATATGAAAAA CGGCCCCTAC TCCC GCAGAGGCCG CTTACCTATGTTTCG CKL_3869 3916868 - 3916581 - | hypothetical protein CKL_3870 3917425 - 3916973 - | hypothetical protein TERM 4646 3917128 - 3917114 - G 71 -8.6 -2.87468 | overlap 3917116 CGCCACCACATGAGA GAGCTT GGA AAGCTC GGTGGCTATTTTAAA TERM 4647 3917545 - 3917519 - R 70 -7.8 -3.33162 | opp_overlap 3917520 3917522, overlap 3917520 TATGTCACTTCATAA TCCCCGAACGGC TTT GCCGGTCGGTGT TTTTCGGGTTTAGGC TERM 4648 3917544 - 3917520 - R 87 -11.3 -2.59683 | opp_overlap 3917520 3917522, overlap 3917519 ATGTCACTTCATAAT CCCCGAACGGC TTT GCCGGTCGGTG TTTTTCGGGTTTAGG TERM 4649 3917520 - 3917544 + r 100 -11.3 -4.70879 | opp_overlap 3917520 3917519, overlap 3917522 ATGTCACTTCATAAT CCCCGAACGGC TTT GCCGGTCGGTG TTTTTCGGGTTTAGG TERM 4650 3917522 - 3917542 + r 100 -12.5 -3.9654 | opp_overlap 3917520 3917519, overlap 3917520 GTCACTTCATAATCC CCGAACGGC TTT GCCGGTCGG TGTTTTTCGGGTTTA TERM 4651 3917551 - 3917580 + r 100 -15.1 -3.59979 | opp_overlap 3917568 CGGTCGGTGTTTTTC GGGTTTAGGCTGC CAAA GCAGCATAAACCC TTTAACCTGCACCAC CKL_3871 3917911 - 3917582 - | hypothetical protein TERM 4652 3918062 - 3918102 + r 83 -7.5 -4.77036 | overlap 3918064 3918074 TTTCATAATTTCATT TGGGGTGATTGAGAGGGCG CAT CGTCCTCTTGAGTGACCCA TTTTTCATAATCCGA TERM 4653 3918064 - 3918101 + r 75 -8.5 -3.4574 | gap 1, overlap 3918062 3918074 TCATAATTTCATTTG GGGTGATT-GAGAGGGCG CAT CGTCCTCTTGAGTGACCC ATTTTTCATAATCCG TERM 4654 3918074 - 3918090 + r 81 -10.1 -3.06312 | overlap 3918064 3918062 ATTTGGGGTGATTGA GAGGGCG CAT CGTCCTC TTGAGTGACCCATTT CKL_3872 3918675 - 3918049 - | hypothetical protein TERM 4655 3918628 - 3918652 + g 79 -7.2 -4.42464 | gap 1, opp_overlap 3918628 TTTCGACACCTCAAA GTCCTGCGGAT TAAA ATCCG-AGGGC TTTCTTTCAAAGATT CKL_3873 3919782 - 3918691 - | peptidase TERM 4656 3919044 - 3919022 - G 73 -8.4 -3.53444 | overlap 3919025 CCACCGCCGCCGAAA GGATTCGGCC TCC AGCCGAATTC CGAAGTGACCATACT TERM 4657 3919041 - 3919025 - G 71 -8.7 -2.90496 | overlap 3919022 CCGCCGCCGAAAGGA TTCGGCC TCC AGCCGAA TTCCGAAGTGACCAT TERM 4658 3919733 - 3919746 + g 80 -9.5 -3.53091 | CGTTTGTCAGTGACT GCGGC GATT GCCGC TTTCACCGCAAGGGT CKL_3874 3920292 - 3919789 - | hypothetical protein TERM 4659 3920344 - 3920322 - R 100 -10.5 -4.77567 | opp_overlap 3920322 3920317 ATTCGCATAATAAAA GCCGGGGCA TCTTC TGCCTCGGC TTCGGTTGGTTCTGG TERM 4660 3920322 - 3920344 + r 100 -12.7 -3.25356 | opp_overlap 3920322, overlap 3920317 ATTCGCATAATAAAA GCCGGGGCA TCTTC TGCCTCGGC TTCGGTTGGTTCTGG CKL_3875 3921346 - 3920303 - | hypothetical protein TERM 4661 3920870 - 3920882 + g 73 -9.1 -2.87132 | overlap 3920860 ATTATCCACCGGTTT GCACC AGC GGTGC TGTCTGGCCACCGAC TERM 4662 3921006 - 3920979 - G 87 -12 -2.68775 | TTAGCATCAAAGGGA GAGGCATCCACG TGAA CATGGATGCCGC AGGAACTGTTGGCGA TERM 4663 3921024 - 3921041 + g 73 -8.3 -3.53444 | opp_overlap 3921012 GAACTGTTGGCGATG GCACCGG CCTC CCGGAGC TTTCGCACCAACTCC TERM 4664 3921081 - 3921105 + g 76 -6.5 -4.73682 | gap 1 TCGATGTCCTCCCAG CGGCAGATGG GGCTGA CCATCT-CCG TTTTGTATTCTGCCG CKL_3876 3923194 - 3921365 - | hypothetical protein TERM 4665 3922870 - 3922886 + g 76 -8.7 -3.40601 | overlap 3922859 TGCTTTCAGCCATGA CGGTCTG CTG CAGATCG TTGGTGTTGGATTTA TERM 4666 3923258 - 3923239 - H 95 -11.4 -4.39166 | TTGGATATAGGAAAA GCCGCCAC GTTT GTGACGGC TCCAAGTAAAATGGT CKL_3877 3923335 - 3923763 + | hypothetical protein TERM 4667 3923807 - 3923838 + T 100 -11.7 -5.1485 | opp_overlap 3923807 3923808, overlap 3923808 ATAGGGAGTTAAAAA CGGGAAGTCAAGA ACACCC TCTTGACTTCCCA TTTTTCTATTCGTTC TERM 4668 3923838 - 3923807 - T 100 -14.6 -4.67755 | opp_overlap 3923807 3923808, overlap 3923808 ATAGGGAGTTAAAAA CGGGAAGTCAAGAA CACC CTCTTGACTTCCCA TTTTTCTATTCGTTC TERM 4669 3923808 - 3923837 + T 100 -15.2 -3.67283 | opp_overlap 3923808 3923807, overlap 3923807 TAGGGAGTTAAAAAC GGGAAGTCAAGA ACACCC TCTTGACTTCCC ATTTTTCTATTCGTT TERM 4670 3923837 - 3923808 - T 100 -15.9 -3.3993 | opp_overlap 3923807 3923808, overlap 3923807 TAGGGAGTTAAAAAC GGGAAGTCAAGAA CACC CTCTTGACTTCCC ATTTTTCTATTCGTT CKL_3878 3924434 - 3923844 - | hypothetical protein TERM 4671 3924380 - 3924401 + g 81 -4.3 -5.50499 | overlap 3924381 TTTCCTTGGTACCGA TGAGCTGCC GGGT GGAGGCTCG TTTTTTTGCATCTGC CKL_3879 3924696 - 3924421 - | hypothetical protein TERM 4672 3924519 - 3924481 - G 93 -8.1 -5.24129 | opp_overlap 3924485 3924488, overlap 3924483 CTTGGTTATAAAAAA GGCACAGGCATACCGGA GAAAA TCCAGAATGCTTGTGTC CTCAAATCGGATGGT TERM 4673 3924517 - 3924483 - G 73 -9.3 -2.83915 | opp_overlap 3924485 3924488, overlap 3924481 TGGTTATAAAAAAGG CACAGGCATACCGGA GAAAA TCCAGAATGCTTGTG TCCTCAAATCGGATG TERM 4674 3924750 - 3924728 - R 90 -8.4 -4.66163 | opp_overlap 3924728 ATCCGCATGGAAAAA CCGGAGCC TTGATTC AGCTCCGG TTCCATTTCTTTCGC TERM 4675 3924728 - 3924750 + r 70 -7.7 -3.41807 | opp_overlap 3924728 ATCCGCATGGAAAAA CCGGAGC CTTGATTCA GCTCCGG TTCCATTTCTTTCGC CKL_3880 3925275 - 3924709 - | hypothetical protein CKL_3881 3926213 - 3925272 - | hypothetical protein TERM 4676 3925440 - 3925420 - G 81 -8.9 -3.78775 | opp_overlap 3925418 3925420 GCTGCCAGCATCAAA CCAAGCCCC AGC AGGGCATGG TCTTTGACCACCATC TERM 4677 3925420 - 3925440 + g 71 -8.2 -3.34715 | opp_overlap 3925420, overlap 3925418 GCTGCCAGCATCAAA CCAAGCCC CAGCA GGGCATGG TCTTTGACCACCATC TERM 4678 3926375 - 3926385 + r 70 -6.8 -3.9009 | CGCAGTAACCGATGC CGAG AAG CTCG TTTCTCAGGTCGCTT CKL_3882 3926848 - 3926510 - | hypothetical protein TERM 4679 3926874 - 3926927 + r 93 -9 -4.75404 | gap 1, opp_overlap 3926883 3926884 3926887, overlap 3926881 3926884 CCTTTCTTTATAGGG TTGAGAA-TAGCAAGGCCGCAGC TTTTGATTC GCTGCGGCCTTGTTCTTTCTCTG TTTTTAATGGGGTTT TERM 4680 3926881 - 3926919 + r 100 -12.5 -4.38876 | opp_overlap 3926883 3926884 3926887, overlap 3926874 3926884 TTATAGGGTTGAGAA TAGCAAGGCCGCAGC TTTTGATTC GCTGCGGCCTTGTTC TTTCTCTGTTTTTAA TERM 4681 3926917 - 3926883 - R 100 -12.9 -3.22102 | opp_overlap 3926881 3926874 3926884, overlap 3926884 3926887 ATAGGGTTGAGAATA GCAAGGCCGCAGC TTTTGATTC GCTGCGGCCTTGT TCTTTCTCTGTTTTT TERM 4682 3926884 - 3926916 + r 100 -16.4 -4.2572 | opp_overlap 3926884 3926883 3926887, overlap 3926881 3926874 TAGGGTTGAGAATAG CAAGGCCGCAGC TTTTGATTC GCTGCGGCCTTG TTCTTTCTCTGTTTT TERM 4683 3926916 - 3926884 - R 100 -16.4 -2.5294 | opp_overlap 3926881 3926874 3926884, overlap 3926883 3926887 TAGGGTTGAGAATAG CAAGGCCGCAGC TTTTGATTC GCTGCGGCCTTG TTCTTTCTCTGTTTT TERM 4684 3926913 - 3926887 - R 95 -12.3 -3.41745 | opp_overlap 3926884 3926881 3926874, overlap 3926884 3926883 GGTTGAGAATAGCAA GGCCGCAGC TTTTGATTC GCTGCGGCC TTGTTCTTTCTCTGT CKL_3883 3928775 - 3926931 - | hypothetical protein TERM 4685 3927264 - 3927282 + gr 70 -6.6 -3.89346 | overlap 3927233 3927267 TTGATTGGTGCTAAC TCTGGCGG AAA CCGTCTGA TTTATGCCATAGCCC TERM 4686 3928704 - 3928687 - GR 84 -5.5 -5.4505 | opp_overlap 3928687 TTCCGCAACAAAAAA GCACGGC ATAA ACCGTAC TTTCGATGCGAATAT CKL_3884 3929241 - 3928726 - | hypothetical protein TERM 4687 3928963 - 3928997 + gr 70 -7.1 -3.59979 | gap 1 AGCTTCCGGCTTTAC CGGATCAGGCTGGAGC TTCT GCTCCGGCA-GATCGG TTTGCGGTGGCAACG TERM 4688 3929136 - 3929108 - GR 75 -8.1 -3.66844 | opp_overlap 3929096 3929105, overlap 3929097 TCCACATCCGAAGAA CCGGATGGCTCTT GTG ACGAAGCATCCGG CTTGACGGGTTCCTT CKL_3885 3930050 - 3929343 - | hypothetical protein CKL_3886 3931177 - 3930308 - | hypothetical protein TERM 4689 3931268 - 3931253 - R 88 -10.4 -3.53012 | opp_overlap 3931253, overlap 3931263 CGGTGTGCCTCCAAA GGGGGA ACTA TCCCCC TTTGGGGAACCCCCA TERM 4690 3931253 - 3931268 + r 88 -10.4 -3.53012 | opp_overlap 3931253 3931263 CGGTGTGCCTCCAAA GGGGGA ACTA TCCCCC TTTGGGGAACCCCCA CKL_3887 3932253 - 3931324 - | hypothetical protein TERM 4691 3931672 - 3931684 + g 74 -9.1 -3.16564 | CTCGTTGTCGATTTT GGTGC GCA GCACC TTGATAGCCTCCAGC TERM 4692 3932097 - 3932113 + g 93 -11.5 -3.59233 | overlap 3932093 GAAATCCCGGCTTTT GGCGGCG CTG TGCCGCC TTGATTTCATCCTTG TERM 4693 3932232 - 3932209 - G 93 -6.8 -5.39755 | gap 1 GATAAGCAGAAAAAA GCCTGTAATCA TAC CGAT-ACAGGC GAGTAATTGAATGGT CKL_3888 3933602 - 3932250 - | hypothetical protein CKL_3889 3934414 - 3933599 - | hypothetical protein TERM 4694 3934211 - 3934247 + g 71 -2.2 -5.4251 | overlap 3934214 GATACAGGGAAGCAT GGGCGTGGTGCAGT CGCATAAAA GCAGTACCACGTTC TTTTTTCTGTCTGCC CKL_3890 3935245 - 3934415 - | hypothetical protein TERM 4695 3935293 - 3935271 - R 70 -6.9 -4.05788 | overlap 3935273 CTCCTTTAAATGAAA TAGGCGAGC AGACA GCCCGCCGA TAAAAAAGGCGCAAG TERM 4696 3935291 - 3935273 - R 84 -9.5 -3.62354 | overlap 3935271 CCTTTAAATGAAATA GGCGAGC AGACA GCCCGCC GATAAAAAAGGCGCA CKL_3891 3935680 - 3935261 - | hypothetical protein TERM 4697 3935342 - 3935301 - G 95 -8.7 -5.24129 | gap 1, opp_overlap 3935308, overlap 3935302 CCCGCCGATAAAAAA GGCGCA-AGGGGGAAGGC TTTTTTC GCCTCCCGCCTTTGCGCT CTGCAAACAATCCGA TERM 4698 3935341 - 3935302 - G 95 -12.2 -3.73995 | gap 1, opp_overlap 3935308, overlap 3935301 CCGCCGATAAAAAAG GCGCA-AGGGGGAAGGC TTTTTTC GCCTCCCGCCTTTGCGC TCTGCAAACAATCCG TERM 4699 3935666 - 3935648 - G 76 -3.7 -5.46657 | opp_overlap 3935650, overlap 3935650 CAGGGCAATAAAAAA GTCCGCC TGCAC AGCGGCC AGCTTATCCGGCATA TERM 4700 3935949 - 3935930 - R 100 -13.6 -2.87132 | opp_overlap 3935923 TTGCGTTTTTACATA CCGCCCAT CTGC ATGGGCGG CTGAGACTGTTCTGG CKL_3892 3936249 - 3935923 - | hypothetical protein TERM 4701 3935958 - 3935991 + g 71 -6.6 -4.015 | TGGGCGGCTGAGACT GTTCTGGTGCGGCT TCCTGC GGCTGCGCCGGGGC TTGTTTCATGGCTAC TERM 4702 3936140 - 3936124 - G 93 -10.1 -4.50159 | TGGAATGGAAACAAA GAGACCG TCA CGGCCTC CCTCCACCACCTTGA CKL_3893 3936857 - 3936309 - | hypothetical protein CKL_3894 3937428 - 3936871 - | hypothetical protein CKL_3895 3937716 - 3937432 - | hypothetical protein CKL_3896 3938137 - 3937706 - | hypothetical protein CKL_3897 3939095 - 3938160 - | DNA methylase TERM 4703 3938544 - 3938511 - G 100 -10.3 -5.80364 | gap 1 ATCGCAATAAAAAAA GGCATCGTCCCGGTCA TAT TG-CCGGATCAATGCC TCGAAATCCTTGTTT TERM 4704 3939182 - 3939146 - R 100 -8.9 -5.45802 | gap 1, opp_overlap 3939148 CTCTGAAAAGAAAAA GAGCCGATGCTCACTA CATTTT CAGTGA-CATCGACTC ATCTGGATTATGATA CKL_3898 3939749 - 3939159 - | hypothetical protein CKL_3899 3940267 - 3939749 - | hypothetical protein TERM 4705 3939775 - 3939796 + g 70 -7.3 -3.62572 | overlap 3939776 CTCCCATCGTCATGC CGAAGCCAA AGGA TTGGCTTCC TTTCAGCTCGTCCTC TERM 4706 3939776 - 3939795 + g 82 -10.8 -2.77222 | overlap 3939775 TCCCATCGTCATGCC GAAGCCAA AGGA TTGGCTTC CTTTCAGCTCGTCCT TERM 4707 3940088 - 3940105 + g 75 -2.6 -5.63236 | opp_overlap 3940069 3940076, overlap 3940076 AACGGCGAGACCACG CTCACC TTCGCT GGGGAG TTTTTCTTTTTCGAT TERM 4708 3940255 - 3940241 - G 73 -7.8 -3.61715 | opp_overlap 3940241 3940240 GAGGGGGCTGAATAA CCGCAG TGT CTGCAG CTCATTTTTCATGGT TERM 4709 3940345 - 3940310 - H 100 -17 -5.85737 | AGAGCAATAAAAAAA GCGGCTGTGTTTTTCA GTTA CGAAGAACACAGCCGC CTCAAAATTGCCCCA TERM 4710 3940445 - 3940416 - H 83 -7.9 -4.67697 | overlap 3940418 GGTCAAAACAAGAAA TACCCCGCTTTCT TATT AAAAAGCAGGGTG CATCTATGAAAAACG TERM 4711 3940443 - 3940418 - H 91 -10.5 -3.93953 | overlap 3940416 TCAAAACAAGAAATA CCCCGCTTTCT TATT AAAAAGCAGGG TGCATCTATGAAAAA TERM 4712 3940491 - 3940459 - H 100 -15.8 -4.7497 | opp_overlap 3940459 TGCATCTATGAAAAA CGAGGGTCTTGAAT TTTTC ATTCAAAACCCTCG TCAGGCCGCATAAAC TERM 4713 3940778 - 3940805 + H 80 -10.2 -2.90392 | opp_overlap 3940778 3940783, overlap 3940783 AAATTTTCTTTATAA TCAAATATAAAA ATTT TTTTATATTTGA TCTACTTAACCAGTA TERM 4714 3940805 - 3940778 - H 83 -10.2 -3.2964 | opp_overlap 3940778 3940783, overlap 3940783 AAATTTTCTTTATAA TCAAATATAAAA ATTT TTTTATATTTGA TCTACTTAACCAGTA TERM 4715 3941398 - 3941368 - g 75 -2.6 -5.58454 | opp_overlap 3941373, overlap 3941371 3941373 TGTAGATGAAAAAAA TATTACTGCTTCTT TTA AAGAAGGAGTTTTA AAAATTGAACTTCCA TERM 4716 3941373 - 3941393 + G 71 -6.9 -4.14392 | opp_overlap 3941371 3941368 3941373 ATGAAAAAAATATTA CTGCTTCTT TTA AAGAAGGAG TTTTAAAAATTGAAC hsp18 3941015 - 3941461 + | hypothetical protein TERM 4717 3941489 - 3941533 + T 100 -19.9 -3.82205 | opp_overlap 3941489 3941494, overlap 3941494 TCTATAAACTCATAA TAAAATATAAGGAACTATATT TTC GATATAGTTCCTTATATTTTA TTCTTGATGTATTAC TERM 4718 3941533 - 3941489 - T 100 -19.2 -3.50047 | opp_overlap 3941489 3941494, overlap 3941494 TCTATAAACTCATAA TAAAATATAAGGAACTATAT TTTCG ATATAGTTCCTTATATTTTA TTCTTGATGTATTAC TERM 4719 3941494 - 3941528 + T 100 -15.4 -4.93661 | opp_overlap 3941489 3941494, overlap 3941489 AAACTCATAATAAAA TATAAGGAACTATATT TTC GATATAGTTCCTTATA TTTTATTCTTGATGT TERM 4720 3941528 - 3941494 - T 100 -14.7 -4.81863 | opp_overlap 3941494 3941489, overlap 3941489 AAACTCATAATAAAA TATAAGGAACTATAT TTTCG ATATAGTTCCTTATA TTTTATTCTTGATGT CKL_3902 3942865 - 3941531 - | replicative DNA helicase CKL_3903 3944810 - 3942915 - | La-related protease rplI 3945266 - 3944823 - | 50S ribosomal protein L9 TERM 4721 3944941 - 3944951 + g 79 -2.6 -5.72053 | overlap 3944948 TTTTTCTTATCTATA TTTA TTT TAAA TTTTTTATTTAGTTC CKL_3905 3947251 - 3945266 - | hypothetical protein TERM 4722 3945692 - 3945680 - G 76 -6.3 -4.57073 | GAGTCTCCTTAAAAA TGAAG CAG CTTCA AAAGTTCTTACCCCA TERM 4723 3946924 - 3946949 + g 78 -7 -4.48987 | TTTGACCTAATATAT CTTTTCCTTT TAATAT AGAGGAAAAG TTTTGATTATACCAA CKL_3906 3948256 - 3947270 - | hypothetical protein CKL_3907 3948585 - 3948268 - | hypothetical protein TERM 4724 3948523 - 3948503 - G 85 -4.8 -5.54192 | AGTAATTTAAAAAAA TCTCCTAT TATAC ATAGAAGA TCCGCCTTTAAATCC TERM 4725 3948546 - 3948571 + g 82 -4.9 -5.45813 | TTAAATCCTCTATCA TTTTAACATTA TACA TTATGTTAAAA TTTTGTTTTTTCATA TERM 4726 3948700 - 3948721 + r 100 -10.3 -4.69664 | opp_overlap 3948700 TTAGGTTTAAAAAAA GTGAAGAAT ACAA ATTCTTCAC TTTTTAACTACTCTG TERM 4727 3948721 - 3948700 - R 100 -10.3 -5.42259 | opp_overlap 3948700 TTAGGTTTAAAAAAA GTGAAGAAT ACAA ATTCTTCAC TTTTTAACTACTCTG rpsR 3948983