TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.570846 %AT, 1753534 nt, 13219 terms. Intergenic: 0.596997 %AT, H2T: 298475 nt, 1909 terms; T2T: 131964 nt, 1882 terms; H2H: 154245 nt, 1819 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|154688247|ref|NC_009726.1| Coxiella burnetii Dugway 5J108-111 plasmid pQpDG, complete sequence (length 54179) CBUD_A0001 79 - 537 + | helix-turn-helix domain containing protein fic 668 - 1129 + | cell filamentation protein TERM 1 2023 - 2036 + G 72 -9.5 -3.09516 | opp_overlap 2017 TCCTAAAAACCATGC GCGGG ATTG CCCGC TTACATGGTCGGCCG TERM 2 2147 - 2132 - g 71 -2.4 -5.14563 | CCCCTCATTAAAAAA CACACG AGAT CGAGCG CTGTTGTTAGTGGGA CBUD_A0008 1722 - 2666 + | DNA integration/recombination/inversion protein TERM 3 2858 - 2843 - f 79 -3.4 -5.4756 | opp_overlap 2836 AATTTTAATAAAAAA TTTATT TACA AATAAA AAGGTCCATTTATAC CBUD_A0010 2914 - 3642 + | hypothetical protein CBUD_A0009 4513 - 3617 - | hypothetical protein TERM 4 3709 - 3696 - G 71 -2.3 -5.0917 | GTATTAAAAAATAAA GGCGA AGAG TTGCC ATAGGTTCTCCAATA CBUD_A0011 4872 - 5276 + | hypothetical protein CBUD_A0012 5507 - 7366 + | phospholipase CBUD_A0013 7701 - 7405 - | DNA integration/recombination/inversion protein TERM 5 8149 - 8125 - g 88 -10.1 -4.14243 | opp_overlap 8126, overlap 8126 GATTTCACTGCAAAA GTTCATCCCTA TGA TAGGGATGAAT TATTCGAGCTATTTC TERM 6 8126 - 8148 + G 100 -13.6 -3.65603 | opp_overlap 8125 8126 ATTTCACTGCAAAAG TTCATCCCTA TGA TAGGGATGAA TTATTCGAGCTATTT TERM 7 8148 - 8126 - g 100 -13.6 -3.08224 | opp_overlap 8126, overlap 8125 ATTTCACTGCAAAAG TTCATCCCTA TGA TAGGGATGAA TTATTCGAGCTATTT CBUD_A0014 7840 - 8298 + | hypothetical protein dnaJ 10069 - 8483 - | chaperone protein TERM 8 9236 - 9226 - G 82 -3.2 -5.48213 | CATTTAAAATAAAAA GCAA AAA TCGC TCGCGATGAACTACC TERM 9 10511 - 10527 + r 78 -7.3 -4.34947 | ACGGGTGTACCAGTG CGAAAGG GCC TCTTTCG TTTTGCTAGTGTATT TERM 10 11931 - 11945 + r 72 -4.3 -4.7416 | CAGTCTCTCTAATTC GTTAC AAGCA GTAAC TTTTTAGGGTTTTAG CBUD_A0018 13016 - 12240 - | 3-oxoacyl-[acyl-carrier protein] reductase yobU 13512 - 13018 - | DNA-binding protein CBUD_A0020 13963 - 13514 - | hypothetical protein TERM 11 13876 - 13894 + gr 76 -3.2 -5.21236 | ATCTAGGCTTGATAC TTTGAGGA TAA TTTTCAAA TTTTTCTTGTACCTT CBUD_A0021 14165 - 13926 - | hypothetical protein CBUD_A0022 14461 - 14189 - | hypothetical protein TERM 12 14525 - 14545 + H 93 -12.7 -4.05446 | TGGAGATAGCATTTT TGCTAATCG AGG CGATTAGCA TTTCTGATTAAAAAG CBUD_A0023 14915 - 15304 + | hypothetical protein CBUD_A0024 15335 - 16189 + | tetratricopeptide repeat family protein TERM 13 16342 - 16328 - f 70 -8.6 -3.37344 | opp_overlap 16328 16325 16330 TGCTTATGCAAGCAA CAGCTT TAA AAGCTG TCATTAGTCGCGGGC CBUD_A0026 16512 - 17693 + | hypothetical protein TERM 14 17731 - 17710 - T 79 -10.1 -3.51232 | overlap 17706 TGGTTTGGAAATCAA TCCTGCTGC CATT GCGGCAGGA TGAAGATCCCAACAG TERM 15 18139 - 18151 + T 70 -7.7 -3.75153 | AGAGTAGTTTGCAAG CACCT TAC AGGTG TTTCCGTTCCAAACA CBUD_A0026c 19015 - 18749 - | DNA integration/recombination/inversion protein CBUD_A0030 19112 - 20362 + | hypothetical ATPase CBUD_A0030a 20552 - 20442 - | hypothetical protein TERM 16 20866 - 20839 - gH 71 -4.9 -4.56597 | gap 2, opp_overlap 20845 CTTTGGTCCTAAAAA CCATGC--GCGGG ATTG CCCGCTTACATGG TCGGCCGAAAAAGCA TERM 17 20845 - 20858 + GH 72 -9.5 -3.09516 | opp_overlap 20839 TCCTAAAAACCATGC GCGGG ATTG CCCGC TTACATGGTCGGCCG TERM 18 20969 - 20954 - gH 71 -2.4 -5.14563 | CCCCTCATTAAAAAA CACACG AGAT CGAGCG CTGTTGTTAGTGGGA CBUD_A0031 20544 - 21035 + | DNA integration/recombination/inversion protein CBUD_A0032 21368 - 22393 + | hypothetical protein CBUD_A0033 23676 - 22591 - | hypothetical protein CBUD_A0033a 23892 - 23993 + | hypothetical protein CBUD_A0035 24130 - 24882 + | tail assembly protein TERM 19 25454 - 25437 - T 76 -2.1 -5.40474 | ATTGCTCCAAAAAAA TATACTA AAGA TAATATA ACTTTTAGACGGGAA TERM 20 26258 - 26240 - T 70 -3.3 -4.9218 | overlap 26248 TATTTACGATAAAAA TAATAAA TTGCT TTTATTA AGCAGCGGCGAGCGA TERM 21 26417 - 26433 + T 74 -3.7 -5.02074 | overlap 26418 ATATGGCGATAACCT GTTTCTG CCT CAGAAAA TTTTTTCCCCGCTCG TERM 22 29119 - 29094 - T 81 -2.5 -5.64274 | gap 1, overlap 29095 29096 CCACGGATAAAAAAA CGGGCGCAGTAC TGA GCACTACG-CTG ACCTACGATGATCTG CBUD_A0040 32314 - 31061 - | phage integrase family protein TERM 23 31996 - 32014 + g 71 -3.1 -5.0133 | GCGGCTTTGTTTCCC CTATCCA TGTTT TGGGTGG TTTTTTACAAAAATA TERM 24 32609 - 32638 + G 71 -9.3 -3.01726 | opp_overlap 32613, overlap 32604 32608 32613 TACCGACATGTCGCT CAAACGGATCGAT TTGA AGCGACCCGTTTG CTTTCTCTAAAAAAG CBUD_A0042 32516 - 32686 + | hypothetical protein TERM 25 32878 - 32861 - T 90 -9.1 -5.03314 | opp_overlap 32856 32861 CCTACCGTTAAAAAA GCGCTCA CGAG CGAGCGC TTTTGTTAGTGGGAT TERM 26 32861 - 32878 + T 88 -8.4 -4.71828 | opp_overlap 32861, overlap 32856 CCTACCGTTAAAAAA GCGCTC ACGAGC GAGCGC TTTTGTTAGTGGGAT CBUD_A0043 33446 - 32931 - | hypothetical protein TERM 27 33945 - 33926 - H 71 -9.4 -2.78996 | opp_overlap 33934, overlap 33925 TATTCGGATTTAAAG TGTGCAAT GTTT ATTGCACA ATGAAATAAACTTAT CBUD_A0046 34107 - 34838 + | hypothetical protein TERM 28 35053 - 35077 + T 73 -8.8 -3.77553 | opp_overlap 35053 35052 35055 AAAGCCTTTTACAAG TATACTGATA TTTCT TATCAGTATA TTGTTAATCATATTC TERM 29 35614 - 35593 - T 80 -4.4 -5.28176 | opp_overlap 35593 TGGATGGAGAAAAAA GAGGGG ATGTTGTTGA CCCCTC TATTGGCTACGCTGC CBUD_A0049 37109 - 36357 - | hypothetical protein TERM 30 37075 - 37086 + g 100 -4.4 -5.9873 | ACTGCATTTTGGTAA GCTT CAAG AAGC TTTTTTTTCTCATCA CBUD_A0050 38217 - 37123 - | hypothetical protein TERM 31 37246 - 37230 - G 82 -5.7 -5.0133 | overlap 37231 TAGTTTTCCAAAAAA CGTCGGC CCG GCCGCCA CCGCCGACCAGCATG CBUD_A0051 38651 - 38962 + | hypothetical protein CBUD_A0052 39796 - 39095 - | hypothetical protein TERM 32 39443 - 39466 + g 76 -9.6 -3.53012 | GTTGCGAGGTTGTAT TTCGACTCCC ATAA GGGAATCGAA TTTAAAGAGGCAGGC TERM 33 39739 - 39752 + g 84 -5.3 -5.31456 | GCAGAGTTTCCTCAA TAGCA CAAT TGCTA TTTTTTATAGATTGA CBUD_A0053 40020 - 39859 - | putative DNA-binding protein CBUD_A0053a 40258 - 40007 - | hypothetical protein CBUD_A0055 40876 - 41178 + | hypothetical protein CBUD_A0056 41585 - 41241 - | putative DNA-binding protein CBUD_A0057 41947 - 41582 - | hypothetical protein TERM 34 41781 - 41809 + g 82 -4.5 -5.252 | overlap 41769 41785 GTTCGAAGCCCACCT CGTTTTCCTTTAC CTA GTATAGGAATCCG TTTTTTATAGACATA CBUD_A0058 42531 - 42034 - | hypothetical protein CBUD_A0059 45155 - 42528 - | DNA helicase TERM 35 44501 - 44522 + gH 100 -11.7 -3.99347 | TTTTTACCGTTTGCG CTTCAATCC CTTT GGATTGAAG TTCTTTGACTGCTTT CBUD_A0060 45107 - 45727 + | hypothetical membrane spanning protein CBUD_A0061 45717 - 46430 + | 3',5'-cyclic-nucleotide phosphodiesterase CBUD_A0063 46653 - 47006 + | hypothetical protein TERM 36 47068 - 47055 - T 72 -4.5 -4.77036 | GGTTATTATTAAAAA GGACC TCGT GATCC TACGCTTAATGAGCA CBUD_A0063a 47482 - 47276 - | hypothetical protein CBUD_A0064 48171 - 47551 - | putative acetyltransferase/acyltransferase parB,1 49360 - 48413 - | chromosome partitioning protein CBUD_A0066 49476 - 49607 + | hypothetical protein CBUD_A0067 49647 - 50867 + | plasmid partition protein A parB.2 50860 - 51864 + | DNA-binding protein TERM 37 51890 - 51842 - f 100 -25.5 -3.44289 | overlap 51843 51847 TAGAAATTGAATTAA GTCAATCCGGAGCTCCGGATTGA CAC CCAATCCGGAGCTCCGGATTGGA GCTTGAGCCAAATAT TERM 38 51889 - 51843 - f 100 -29 -2.6585 | overlap 51842 51847 AGAAATTGAATTAAG TCAATCCGGAGCTCCGGATTGA CAC CCAATCCGGAGCTCCGGATTGG AGCTTGAGCCAAATA TERM 39 51885 - 51847 - f 100 -28.4 -3.24166 | overlap 51843 51842 ATTGAATTAAGTCAA TCCGGAGCTCCGGATTGA CAC CCAATCCGGAGCTCCGGA TTGGAGCTTGAGCCA TERM 40 52004 - 52028 + G 70 -2.8 -4.96388 | opp_overlap 51999 51996 51991, overlap 51996 51991 AATAACATTACTTTG GTGCAAAGAA AGTTA TTCAATGCAC TTTTATTTAATGCTT CBUD_A0069 51893 - 53209 + | plasmid replication initiation protein CBUD_A0070 53878 - 53300 - | hypothetical protein TERM 41 53710 - 53734 + g 73 -3.5 -5.0538 | overlap 53714 GGTATTCTTCAGCCG CGGCTTGAACC ATC GCTTCAAATCG TTTTTTGGCGTCCGC SEQUENCE gi|154705721|ref|NC_009727.1| Coxiella burnetii Dugway 5J108-111, complete genome (length 2158758) TERM 1 435 - 412 - g 74 -4.6 -4.87893 | AATGCCAACCAAAAA TTCCCATGAG CCCT CTCATCGAAA AGCAGCGGCTCCCCC TERM 2 453 - 437 - g 76 -7.9 -4.18018 | CCCTCTCATCGAAAA GCAGCGG CTC CCCCTGC CGGTACCACGATTTC TERM 3 1302 - 1282 - g 74 -9.7 -3.10164 | overlap 1286 CGACCTATTAGCTAA GCGACGCAA CCG TTCCGTCGC GCGCCCCCGTCAAAT dnaA 140 - 1495 + | chromosomal replication initiator protein TERM 4 1559 - 1513 - f 77 -6.5 -4.60255 | gap 1, overlap 1514 AGAAGTTTTTAAAAA CCCCTCTCCTA-GCCTCTCCCG CAAG CGGGAGAGGAATAGTGGAAGGT GGCGCTGAGGATTTT TERM 5 1558 - 1514 - f 77 -10 -3.3543 | gap 1, overlap 1513 GAAGTTTTTAAAAAC CCCTCTCCTA-GCCTCTCCCG CAAG CGGGAGAGGAATAGTGGAAGG TGGCGCTGAGGATTT dnaN 1639 - 2748 + | DNA polymerase III, beta chain recF 2753 - 3826 + | DNA replication and repair protein TERM 6 4049 - 4039 - f 93 -5.4 -5.63504 | AATCCGATAAAAAAA TCCT CAC AGGA GCTCCAATCTATGGT TERM 7 4102 - 4085 - f 79 -3.5 -5.44119 | gap 1 TCCACCCTAAAAAAA TCACT-TG GAA CACAGTGA CCCCTGACCTTAGCA TERM 8 4916 - 4932 + G 84 -5.1 -5.37593 | opp_overlap 4916, overlap 4923 CATGCAGTGGAACGA TGGATTC CAA GAAACCA TTTTTTGCTTTACGA TERM 9 6300 - 6276 - g 77 -8.6 -4.05446 | gap 1 GTGCGCAACGACAAA CGCCGAA-CGG TTAC CCATTTCGGCG AAGCCCTCGAATGGT TERM 10 6407 - 6421 + G 70 -5.6 -4.33417 | opp_overlap 6398, overlap 6409 GGAAACCACGATGGA CCGCGA AAG TCGCCG TTTATTATCGGTGAG TERM 11 6483 - 6507 + G 74 -4.1 -5.06414 | opp_overlap 6492 TTTACCACCCTAATG GGCGACCAAGT CGA ACCTCGCCGCC TTTTTATTGAACAAA gyrB 4122 - 6554 + | DNA gyrase subunit B TERM 12 7700 - 7686 - T 75 -7.8 -4.07687 | AGTCTGTGGTTAAAA GCACTC ATT GAGCGC CGCGGAATGAATCGC CBUD_0006 8068 - 7796 - | hypothetical protein TERM 13 8131 - 8084 - R 73 -9.5 -3.10343 | gap 2, opp_overlap 8084 ATACGTATGAGCGAA GCGAAATACGGGAA-AACA-ATG ATGT CATCTATCGTCCCCGTATTTCGC TTCGCTCATACGGGC CBUD_0008 9837 - 8176 - | hypothetical protein TERM 14 8234 - 8271 + g 74 -4.3 -5.06451 | ACTTTTGAGGGTTGC GAAGAAGGAAAAAATGC AGAA GGATTTTTCTTTTCTTC TTTTTTGGACTCCTC CBUD_0009 12074 - 9978 - | hypothetical protein TERM 15 10961 - 10972 + g 70 -5.8 -4.36914 | TCCCTGCATCGCCAC CCCT TAAC AGGG TTTTCTGAAGAAGGG TERM 16 13186 - 13198 + H 73 -7.7 -3.92143 | ATCTATTTAGGAGTC GTTCG GGA CGAAC TTTCTCAAAATTTTC TERM 17 14247 - 14276 + H 82 -6.5 -4.99947 | gap 1, opp_overlap 14225 14249, overlap 14248 14249 TGAAGCGCAGCGTAA TA-CGGGAATTGCG CAA CGTATTTCCCGGTA TTTTGTTTCGTTCCA TERM 18 14248 - 14274 + H 73 -7.2 -4.11369 | opp_overlap 14225 14249, overlap 14247 14249 GAAGCGCAGCGTAAT ACGGGAATTGCG CAA CGTATTTCCCGG TATTTTGTTTCGTTC TERM 19 14249 - 14273 + H 78 -10.7 -3.05194 | opp_overlap 14225 14249, overlap 14248 14247 AAGCGCAGCGTAATA CGGGAATTGCG CAA CGTATTTCCCG GTATTTTGTTTCGTT TERM 20 14989 - 14976 - H 70 -3.1 -4.86731 | CTTCCCGAAAGAAAA GGTTC TGGA AAACC GCTGCATCGCCATAA TERM 21 15099 - 15087 - H 85 -5.5 -5.21236 | AATGTATAAGAAAAA TAGCG ACC CGCCA ACGAATCCCCGACGC TERM 22 16137 - 16150 + G 70 -3.8 -4.78326 | AACTTGCTTTGTTAC CCGT CACGCA ACGG TTTATTTATTTGGAA TERM 23 16650 - 16637 - g 77 -3.8 -5.1925 | opp_overlap 16649, overlap 16628 CGACAAGCCAAAAAA GCTG GCTATG CAGC TACACTTGGCATTTG glmS 15536 - 17371 + | glucosamine--fructose-6-phosphate aminotransferase [isomerizing] TERM 24 17505 - 17470 - g 71 -9.3 -2.90813 | gap 2, overlap 17467 GACCTGGCTAAATTA TACGGCGTTGACACTAA GGTC TTAGTG-CAA-GCCGTA AAACGCAATAAAGAT CBUD_0014 17368 - 17958 + | hypothetical cytosolic protein CBUD_0014a 18115 - 18342 + | hypothetical protein TERM 25 18372 - 18359 - T 75 -8.1 -3.97368 | GCGTTAACCGACAAA TGCCG GCTC CGGCA GCCCCCTGACACCCA CBUD_0015 19213 - 18347 - | gluconolactonase TERM 26 23246 - 23256 + G 88 -6.8 -5.1361 | AATCATCCCGTGCTC CTGC GAT GCAG TTTTTTGAGGTTTAT CBUD_0020 22618 - 23436 + | hypothetical protein polA 26174 - 23466 - | DNA polymerase I TERM 27 23553 - 23579 + g 71 -4.5 -4.58283 | TTCCATGGCTTTTTT GATTTGGGGGA TGACT TTTTCCAAATC TTTTTCGGCCACTTC TERM 28 23633 - 23643 + g 82 -4.6 -5.40072 | GCATGATCAAATGAG CCTC AAC GGGG TTTTTTTGGAGCCAA TERM 29 23736 - 23755 + g 71 -9.2 -3.02511 | TATCGCCGCGCGTTC GGCAGCGC GGCG GCGCTGCA TATTGGAGGCGTGGA TERM 30 25288 - 25319 + g 100 -13.2 -3.80858 | gap 1 GCGGCTACTTTTTTA TCTTGGTTTGCCAGA AGT TC-GGCAAGCCAAGA TTTAAATTCATATTC TERM 31 26325 - 26342 + GH 77 -7.7 -4.17023 | opp_overlap 26324 26325 26327, overlap 26336 26338 ATTATACCTCAGAAT TAGCGGG TCCA TCCGCTA TTTTAGCGTGGTTAA TERM 32 26818 - 26840 + GH 73 -5.4 -4.62313 | overlap 26825 GATGCACGGTGTTTT TGCAGCCGTC TCC GGCGGGGGCA TTGTTTTTGCTTTTA TERM 33 26910 - 26899 - gH 83 -7.2 -4.74504 | opp_overlap 26899 26901, overlap 26901 AGGGGAAGCTAAAAA GCCC GCGC GGGC TTTACCGTTCGCGGT TERM 34 27203 - 27217 + GH 75 -10 -3.14211 | AGTCATCATATTCCA CCGTTG TTT CAACGG TTACTGCACGGCAAT CBUD_0022 26225 - 27853 + | amino acid permease TERM 35 28230 - 28218 - gf 72 -9.1 -3.40382 | GATGAAATCGCACAA CGTCG CTT CGACG AAGCAAAAATGAGAA CBUD_0023 27777 - 28298 + | acyl-CoA hydrolase TERM 36 29128 - 29141 + G 70 -8.1 -3.60627 | opp_overlap 29127 TGCTGGTACATACAC CGGCT TAGA AGCCG TTTCCAATAACGTAA CBUD_0024 28427 - 30370 + | lysine-specific permease TERM 37 30484 - 30473 - g 75 -3 -5.09225 | ATGGGAGGTAAAAAA TATG AACA CATA CATGCTTATCCAATT CBUD_0025 30443 - 30832 + | cupin superfamily protein CBUD_0026 30882 - 31238 + | hypothetical protein TERM 38 31744 - 31725 - g 74 -10 -3.07912 | opp_overlap 31725, overlap 31724 CATTGATACACAAAC CGAGGAAG ATTG CTCCCTCG TTACTTGCAAAGTAA CBUD_0027 31321 - 31932 + | cupin superfamily protein CBUD_0028 32610 - 32149 - | acetyltransferase TERM 39 32496 - 32477 - G 80 -2.8 -5.52079 | ATACCAAAACAAAAA GAATGCTC GATA AAGCGTTC TACATATTCAATTGG CBUD_0029 33365 - 32607 - | hypothetical membrane spanning protein CBUD_0030 33670 - 33374 - | hypothetical protein TERM 40 33576 - 33588 + g 76 -6.9 -4.51812 | overlap 33577 TCTGTCATTTGTACT TGCGC AGG GCGCG TTTCTTCTTGTCCCA CBUD_0031 34332 - 33694 - | hypothetical protein CBUD_0032 34522 - 34650 + | hypothetical protein TERM 41 34791 - 34781 - g 76 -6.8 -4.55697 | opp_overlap 34781 ATTCTGAGAAACAAA TCGC TAA GCGA TTAAATTTGAGTATT CBUD_0033 34669 - 34923 + | bacterial regulatory protein, luxR family CBUD_0034 34937 - 35320 + | bacterial regulatory protein, luxR family TERM 42 35331 - 35370 + T 75 -10.1 -3.07816 | opp_overlap 35321 35320 35331, overlap 35337 35358 AATAGCCCGTATGAA GCGGAATACGGGGATTG CGTTTT TATTTCCCGTATTTCGC TTCGCTGCATACGGG CBUD_0035 35683 - 35396 - | hypothetical protein TERM 43 35695 - 35707 + r 77 -7.7 -4.28548 | GCATTTTAGCTATTG TGGGA AAC TCCCA TTTTGATACATCGGT TERM 44 35924 - 35944 + r 72 -3.4 -5.05577 | CCCTCTTTTTAAAAA CAGAATTT AATTA AAATTTTG TTTTTGGTTTCATTT CBUD_0036 36600 - 36124 - | hypothetical protein CBUD_0037 37998 - 36805 - | export ABC transporter permease protein TERM 45 36954 - 36934 - G 84 -11.1 -3.6284 | AAGTAGGATGCGAAA GCCCCAGCC GGT GGCTAAGGC GAGGATGGAGGCTAT CBUD_0038 38674 - 38009 - | ABC transporter ATP-binding protein macA 39842 - 38667 - | macrolide-specific efflux protein TERM 46 38750 - 38731 - G 70 -7.8 -3.57883 | ATAACACCTGTTAAA GTCGTGTC GCCC GTCACGAC GGGAACCTTTGTTTC TERM 47 38894 - 38912 + g 70 -6 -4.36914 | CGCTCATGCCTACAT GGATAACG TTG CGTTGTTC TTTTGTCACGCCAGG TERM 48 39678 - 39658 - G 80 -9.7 -3.63922 | overlap 39656 ACGGGGCTTAAAACA GGTACCGTT CTC AACGGTGCC AACGAGCCTTTAAAA CBUD_0040 41368 - 39845 - | type I secretion outer membrane protein pdxB 41435 - 42562 + | erythronate-4-phosphate dehydrogenase CBUD_0042 42543 - 42671 + | hypothetical protein TERM 49 43131 - 43147 + G 71 -6.6 -4.07868 | GCGCTTAAATTGGCT TTTCCG ATTTG CGGAAA TTTATATGCGTATAG TERM 50 43236 - 43252 + G 74 -6.5 -4.44046 | opp_overlap 43236 GACTTAACACAAAAT GGCGATT TTT GGTCGCC TTTATTTGCCGTGGG CBUD_0043 42708 - 43421 + | outer membrane protein TERM 51 43504 - 43455 - T 78 -11 -3.09516 | gap 1, opp_overlap 43455 43493 GCCCGTATGAGCGAA GCGAAATACGGGAA-AACAATGA TGTCG TCGTTATCGTCCCCGTATTTCGC TTCGCTCATACGGGT priA 45557 - 43569 - | primosomal protein N' TERM 52 44137 - 44119 - G 71 -3.1 -5.04325 | opp_overlap 44119 GTTAAATGAGAAAAA TGATGGC CTTTC GCTATCA TTTGCGTGCCAATTA TERM 53 45007 - 44955 - G 88 -10.7 -3.83026 | opp_overlap 44976 CGTTGGCACATTAAA TCGTTCACGAAATCGATTTAACGTC TGA GGCGTTAATCCAATTTCGGGAACTA AAATTAAGGCTTGTT TERM 54 45981 - 45993 + GH 74 -7.7 -3.91897 | GTATGGTGACCATGT GGAAC GGC GTTCC TTTGTCGGTGGAACC efp 45629 - 46195 + | protein translation elongation factor P (EF-P) TERM 55 46948 - 46970 + GF 72 -4.7 -4.68593 | opp_overlap 46949, overlap 46949 TTGAAGAATTAACAA ACGCTGACG AACAA CGACAGCGA TTTTTAAATGATAAC TERM 56 46949 - 46969 + GF 71 -8.2 -3.40674 | opp_overlap 46949, overlap 46948 TGAAGAATTAACAAA CGCTGACG AACAA CGACAGCG ATTTTTAAATGATAA TERM 57 46969 - 46949 - gf 82 -8.2 -4.39877 | opp_overlap 46948 46949 TGAAGAATTAACAAA CGCTGACG AACAA CGACAGCG ATTTTTAAATGATAA CBUD_0046 46134 - 47165 + | hypothetical protein TERM 58 47269 - 47300 + F 100 -6.2 -5.96894 | opp_overlap 47264 47268 47269 TTACTTTAAATAAAT TAAAATTTAAATAA AAAA TTATTTATATTTTA TTTTTTTATTTACAT TERM 59 47850 - 47835 - g 82 -3.2 -5.42198 | GGCTAAAAAAGAAAA TCGCCA AAGA TGCCGA ACATAAAAACCCGCT TERM 60 47979 - 48011 + G 86 -3.3 -5.73978 | overlap 47986 GAAGCGCTGCGGCGG GTATTGGGACAGCCG TAA CGGTTGGCGTATTAC TTTTTTATTTATGCT CBUD_0047 47387 - 48832 + | hypothetical membrane spanning protein TERM 61 49603 - 49591 - g 76 -2.7 -5.29885 | AATTGAAAAATAAAA TCCTT AAT AAAGA AAATAGTAATCTCAA CBUD_0048 48885 - 50018 + | hypothetical membrane associated protein CBUD_0049 50571 - 50035 - | hypothetical protein TERM 62 50286 - 50276 - G 78 -4 -5.09426 | CTTAATTCTAAAAAA GAAT CAA ATTC TCCCCGATCGCTCAA CBUD_0050 51059 - 50562 - | hypothetical protein TERM 63 50926 - 50916 - G 73 -8.2 -3.58037 | CAGCAATTGGTGAAA GCGC TGA GCGC CTGTAGAAAGAATAT TERM 64 51252 - 51283 + H 75 -5.8 -4.81249 | AATAATTATCACCAC CCGCGTCGATCATT AATG AATGGCCGATGAGG TTTTTCACTTTCAGG TERM 65 52857 - 52844 - g 73 -3.8 -4.91852 | TCGAGGAAAAAGAAA TGGC GGAATG GCCA ACAAATAAGAGGCCA CBUD_0053 51826 - 52875 + | hypothetical protein CBUD_0053a 53114 - 52884 - | hypothetical protein TERM 66 52936 - 52920 - Gf 100 -15.1 -2.52896 | GCAGGCGGGAATCCA GCGCGCC TTC GGCGCGC TGCGCACGTGTGCGC CBUD_0054 53105 - 53524 + | hypothetical protein psd 54377 - 53529 - | phosphatidylserine decarboxylase TERM 67 54568 - 54585 + G 80 -2.7 -5.47218 | overlap 54570 GTGGGTTTAAACCCG TGGGAAA AGAA TTTCCTG TTTTTTTGCATCCCG TERM 68 54656 - 54642 - g 73 -5.7 -4.43477 | CGTACTGAACGAAAA GTAGC AAAAG GCTAC AAAGGATTTACCTTT cca 54384 - 55529 + | tRNA nucleotidyltransferase CBUD_0057 56816 - 55563 - | hypothetical protein lolB 56823 - 57455 + | outer-membrane lipoprotein prs 57630 - 58589 + | ribose-phosphate pyrophosphokinase TERM 69 58667 - 58684 + G 73 -2.7 -5.24647 | opp_overlap 58667 58670, overlap 58668 TATTAAACCAACAAT GGATACT GCCG AGTATCA TTTTCTTTTCTCTCT CBUD_0062 58594 - 60042 + | hypothetical membrane spanning protein CBUD_0062a 61381 - 61244 - | hypothetical protein rfbA 61411 - 62325 + | glucose-1-phosphate thymidylyltransferase TERM 70 62479 - 62432 - T 72 -9.5 -3.07816 | gap 2, opp_overlap 62432 62478, overlap 62416 CCCGTATGCAGCGAA GCGAAATACGGGAA-AACA-ATG ATGT CATCTATCGTCCCCGTATTTCGC TTCGCTCAGACGGGG CBUD_0065 64050 - 62671 - | protoporphyrinogen oxidase TERM 71 63291 - 63313 + g 100 -8.6 -5.27477 | AGATAATTTTTTTCA CGTTATTATT TTC AGTAATAACG TTTTTTACTTCCGCT CBUD_0066 65308 - 64052 - | homoserine dehydrogenase CBUD_0067 66362 - 65322 - | UDP-glucose 4-epimerase TERM 72 65529 - 65507 - G 82 -8.6 -4.27316 | GTTGCCAATTTAAAA TTCGTTTAAT TTT ATCAAACGAA ACATAATAACTGCGA rfbC 66928 - 66359 - | dTDP-4-dehydrorhamnose 3,5-epimerase CBUD_0069 68167 - 66938 - | aminobutyraldehyde dehydrogenase TERM 73 67268 - 67285 + g 71 -6.9 -4.07885 | AAAAGCAATTTTTAG GGCTTCG CTAC CGATGCC TTTTAACAACCCATA TERM 74 67476 - 67462 - G 75 -8.6 -3.87869 | TTAATTTTTTATAAA TTCCCT TAA AGGGAA TAAACGAATAATTTT TERM 75 67531 - 67541 + g 71 -8.2 -3.40867 | CCCTATCGGCATAGG CGCC TGC GGCG TTGATTAATAAGTCG TERM 76 68379 - 68369 - g 79 -8.2 -4.1196 | opp_overlap 68377, overlap 68360 68370 AATTCACGGGCAAAA GCGC GGC GCGC CGAATGCGGCGTTTT TERM 77 68377 - 68390 + G 85 -9.5 -4.11394 | opp_overlap 68369 68370 GGCAAAAGCGCGGCG CGCCG AATG CGGCG TTTTGAAGATAAAGT TERM 78 68414 - 68404 - g 71 -6.8 -4.1891 | opp_overlap 68404 68402 CGTTTTGAAGATAAA GTCC CCG GGAC TGTTTACGGTGCGGG TERM 79 68963 - 68947 - g 72 -8 -3.90744 | GCTCTCGCGAAAGAA GCTGCT ACGGA AGCAGC GGAAGAAGAGGAAAC CBUD_0070 68314 - 69048 + | LSU ribosomal protein L25P pth 69055 - 69618 + | peptidyl-tRNA hydrolase TERM 80 69648 - 69622 - f 81 -7.3 -4.59773 | gap 1, overlap 69623 69624 TTGCATTCTTAAAAA CTTCCTCTCCTG ATGG CAGGAGAGGC-G AAATGAGGTTCAACA TERM 81 69647 - 69624 - f 76 -11 -2.61004 | overlap 69622 69623 GCATTCTTAAAAACT TCCTCTCCTG ATGG CAGGAGAGGC GAAATGAGGTTCAAC TERM 82 69848 - 69823 - g 70 -2.7 -5.00884 | gap 1 AGCGGCTTGAAAAAA TTGCT-CAAATT GTT AATCCGAAGCAA ATTATCCCTACGACA ychF 69651 - 70754 + | GTP-binding protein, probable translation factor TERM 83 70832 - 70845 + G 79 -6.7 -4.67697 | CGTTAATTCTGCACT TGCCA ATAA TGGCA TTTGTTCTTTTACAA CBUD_0073 70758 - 71162 + | hypothetical protein TERM 84 71165 - 71153 - f 75 -5.5 -4.82901 | GTTTTTGGATAAAAA CTGCC ACT AGCAG GCAGGCTTGACATAA TERM 85 71271 - 71255 - f 76 -10.9 -2.62396 | CAGTTGGTTAGAGCA CGGCATT CAT AATGCCG GTGTCGGTGGTTCAA TERM 86 71353 - 71363 + F 75 -5.4 -4.71318 | GAAATACGGGAATTG CCTA TCC TAGG TTATTTTTTCCTATT TERM 87 71417 - 71397 - f 72 -3.2 -5.09426 | gap 1 CTTAATTTCAAAAAA CCCCCGTCG TCCC CG-CGAAGG CGCATAGGCGTCAAC CBUD_0073a 71450 - 71578 + | hypothetical protein TERM 88 71729 - 71767 + G 95 -4.5 -5.78622 | gap 1 AAGCCCTCGATTCTT TGTCTGTCGTAGACG-GC CTAC GCACGGGAACGACGGACA TTTTTTTTCAACTCC CBUD_0075 71698 - 71859 + | hypothetical cytosolic protein TERM 89 72373 - 72389 + G 70 -8.1 -3.72324 | TTTCAAGTCCTATAC CCATAAA AAA TTTATGG TTCTTAGTGGGAGTC CBUD_0076 71961 - 72572 + | hypothetical membrane spanning protein CBUD_0077 73281 - 72685 - | hypothetical protein CBUD_0078 73513 - 73268 - | hypothetical protein TERM 90 73368 - 73380 + g 76 -7.7 -4.12198 | overlap 73363 AGTAAAATCTGCGCT TGAGC GGC GCTCA TTTTACCGGCTTGTA TERM 91 73513 - 73523 + g 73 -5.4 -4.60808 | TAATCAATTTTTTCA TGAG AAC CTCA TTTCTATTTTTATCG TERM 92 73652 - 73642 - g 71 -6.8 -4.20932 | AATATTTATTGAAAA CGCA TAA TGCG AATCCAACTGGAAGG TERM 93 74336 - 74350 + G 73 -3.5 -5.07486 | GTTGAGTTCGCAGGC GCCGT TTCAT ATGGC TTTTTATTACGAATC CBUD_0079 73635 - 75056 + | hypothetical protein CBUD_0079a 75125 - 75487 + | hypothetical protein CBUD_0081 75822 - 75622 - | hypothetical protein CBUD_0082 75989 - 75861 - | hypothetical protein TERM 94 75892 - 75931 + g 100 -15.9 -3.07816 | opp_overlap 75892 75900, overlap 75876 75875 75900 CCCGTATGCAGCGAA GCGGAATACGGGAATTG TGGTTT TATTTCCCGTATTCCGC TTCGCTGCATACGGG TERM 95 75931 - 75892 - G 100 -15.2 -3.07816 | opp_overlap 75876 75875 75892 75900, overlap 75900 CCCGTATGCAGCGAA GCGGAATACGGGAATT GTGGTTTT ATTTCCCGTATTCCGC TTCGCTGCATACGGG CBUD_0083 76528 - 76043 - | hypothetical protein TERM 96 76802 - 76824 + G 85 -5.6 -5.20331 | ACTGTGCCGCTTCAT TCGTTGGC CAATTGA GTCAACGA TTTTCTTTATTGTTT TERM 97 76915 - 76928 + G 79 -3.1 -5.25699 | gap 1 AGGGGTTACTATGGA TG-GGC GGG GCCGCA TTTTTATTGTCTCCT TERM 98 77171 - 77181 + G 75 -8.2 -3.86322 | overlap 77177 GATCGATTACCCTCC GGGC ACT GCCC TTTGGTACTATTATT TERM 99 77808 - 77819 + G 90 -4.4 -5.72622 | TTTATTGCAATTTTA GGTA CCGC TACC TTTTTTATTTATAAA TERM 100 78091 - 78079 - g 75 -5.5 -4.82678 | TTATAAAAATGAAAA GACGC TCC ACGTC GTACCTTTTCGCTTC CBUD_0084 76743 - 78539 + | hypothetical membrane spanning protein TERM 101 78591 - 78603 + G 77 -6.3 -4.62313 | TATTGTTGCATTGGT GCTTA AAT TAAGC TTATTTTTCATTTTC CBUD_0086 78532 - 79926 + | hypothetical protein CBUD_0085 80353 - 79904 - | GtrA family protein TERM 102 80413 - 80382 - R 79 -5.2 -5.06414 | TTTGGTTAACAAAAA TCGCAGAGCC AAGCAAGAAACA AGCTCTGCGA TACCTATCTTAAAAG TERM 103 80954 - 80979 + r 75 -9.8 -3.32963 | GAAGTTTTTGGTTAC GGCCTGTTGA CGACTA TCAATAGGCC TTATGCAGTAACAGT TERM 104 81114 - 81124 + r 73 -6.8 -4.17657 | opp_overlap 81107 TCCAAATAGCGTACG GGAG AAC CTCC TTTTACGCTGTACTA pilF 81484 - 81137 - | type 4 pili biogenesis protein CBUD_0089 82650 - 81511 - | 3-hydroxyisobutyryl-CoA hydrolase oppD/oppF 84291 - 82699 - | oligopeptide transport ATP-binding protein TERM 105 82783 - 82793 + g 74 -4 -5.04356 | TAACTGAGTTGGCCC TTGT TCG ACAA TTTTTCCTTCTTTCA TERM 106 83009 - 83046 + g 77 -8.3 -3.96148 | opp_overlap 83033 GCGATGCAGATACGC TGGCGCTCACCCCCTGA AAAT TCATGGGGATAACGCCA TTTGTAGTCGGGCGA TERM 107 83482 - 83498 + g 71 -3 -4.98522 | gap 1, overlap 83466 83481 CGCTTTTGCTTCTAG C-AAGGC GGTT GCCTTTG TTTTTGTATCACGTT TERM 108 84129 - 84152 + g 73 -5.2 -4.62069 | opp_overlap 84128 84135 TCAACGGGAGTAATT GCATAACAGC CAAT GCCGTCATGC TTTTTCCACTACCAG TERM 109 85758 - 85748 - R 90 -3.2 -5.93809 | CTCGCATAAAAAAAA GCAA TAA CTGC AATGATGAATAAGCC oppB 86839 - 85829 - | oligopeptide transport system permease protein TERM 110 86116 - 86065 - G 71 -6.9 -4.08216 | gap 1 CCACGCCTGTCAAAA TCGGAA-TCAAACTGTTTTTCAAA ATATG TTTGTATAACACTTTGAATTCCGA TAATCCTTTAGCACG TERM 111 86640 - 86623 - G 80 -2.6 -5.47218 | opp_overlap 86623 TCGTATTGAAAAAAA GCGGTT TATCAT AGCCGC GTTCTTTTTTCCAAC oppA 89098 - 86864 - | oligopeptide-binding protein TERM 112 87963 - 87979 + g 74 -8 -3.99324 | GCTTGATCGAAACTT TCGGGA CTAAT TCCCGA TTTATCATAGTAACC TERM 113 90114 - 90145 + G 88 -10.8 -3.90588 | opp_overlap 90103 90115, overlap 90115 AAGACGCCTTTAAGC ATTGATCCCGCCGC TTGC GCAGCGGGATCAGA TTTAATTACGCAGTA TERM 114 90115 - 90144 + G 100 -14.3 -2.94032 | opp_overlap 90103 90115, overlap 90114 AGACGCCTTTAAGCA TTGATCCCGCCGC TTGC GCAGCGGGATCAG ATTTAATTACGCAGT TERM 115 90144 - 90115 - g 95 -14.3 -2.71483 | opp_overlap 90115 90114, overlap 90103 AGACGCCTTTAAGCA TTGATCCCGCCGC TTGC GCAGCGGGATCAG ATTTAATTACGCAGT CBUD_0095 89133 - 90161 + | lysine 2,3-aminomutase CBUD_0094 91962 - 90151 - | hypothetical membrane spanning protein TERM 116 90481 - 90470 - G 93 -4.4 -5.7946 | TTCTTAATAAAAAAA TCCA GAAT TGGA TTAAACAAGAAAAGC CBUD_0095a 92319 - 92224 - | hypothetical protein CBUD_0096 92882 - 92340 - | hypothetical membrane associated protein TERM 117 92657 - 92647 - G 77 -4.6 -4.99435 | GTCAACAACCAAAAA GCGC CCA ACGC GAACGCAAAAAAACT parC 95146 - 92885 - | topoisomerase IV subunit A TERM 118 93264 - 93275 + g 71 -2.2 -5.08824 | AATTTGATGACGGCT TTGC CACT GCGA TTTTTTACGTGCAGA CBUD_0097a 95189 - 95347 + | hypothetical protein CBUD_0097b 95635 - 95492 - | hypothetical cytosolic protein CBUD_0100 95723 - 96376 + | hypothetical protein TERM 119 96859 - 96870 + GT 72 -7.2 -3.96148 | ACAGCGGTGAAGTTT GCGC TCAA GCGC TTTATCATGGACAAA TERM 120 97121 - 97104 - gT 71 -4.1 -4.86939 | GAAGAAACCGAAAAA CAAGTGG AAAT CCATTTG GCCGACCATTTACGC pabA 97865 - 97260 - | anthranilate synthase component II CBUD_0102 96663 - 97310 + | 2-polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase rpe 98541 - 97846 - | ribulose-phosphate 3-epimerase TERM 121 98558 - 98579 + r 89 -5.9 -5.46129 | overlap 98559 AAACCATGCTTCGCG CCTTACGAA TTTG TTCGTAAGC TTTTTTAATTTGTTG TERM 122 98559 - 98578 + r 83 -9.4 -3.85237 | overlap 98558 AACCATGCTTCGCGC CTTACGAA TTTG TTCGTAAG CTTTTTTAATTTGTT mucZ 99356 - 98541 - | mucoidy activation protein TERM 123 100220 - 100205 - g 80 -2.6 -5.5112 | overlap 100210 GCGATTAAGAAAAAA TATGAT CAAT ACCATA TTGAAGAAGATCCCT TERM 124 100592 - 100603 + G 70 -5.8 -4.35524 | opp_overlap 100592 TTTTCTGATAATAAA TCGG TTAA CCGA TTTTACATTTACGGC TERM 125 100603 - 100592 - g 70 -5.8 -4.30719 | opp_overlap 100592 TTTTCTGATAATAAA TCGG TTAA CCGA TTTTACATTTACGGC gshA 99392 - 100699 + | glutamate--cysteine ligase TERM 126 100730 - 100709 - f 80 -6.5 -4.78326 | opp_overlap 100709 100718 TTTTAAAGAAAGAAA TCTCGGGCG CTTG CGGCCAAGA TTTTTAAAAAGGCAA gshB 100753 - 101718 + | glutathione synthetase TERM 127 102196 - 102185 - g 71 -4.4 -4.87665 | TCCGAGGCAGAAAAA TTGG CTCG CCAA ATGAAATTGCCGCTG TERM 128 102748 - 102693 - g 75 -3.2 -5.23943 | gap 1, opp_overlap 102701 102735 102744, overlap 102694 TAGTAAAAAAAGAAA TGCGAAT-CTTACGACGCCTCGTCGGC GCG GACGACGACGCACCGCAATTATTGGCG CTTGCTTTAAAAAAA CBUD_0108 102125 - 102889 + | SAM-dependent methyltransferase CBUD_0107 104155 - 102872 - | hypothetical ATPase TERM 129 102997 - 102987 - G 95 -5.4 -5.84381 | opp_overlap 102987 TTAGTAATAAAAAAA CCAA CTT TTGG CTTATAAGCTTCAGT TERM 130 104282 - 104263 - R 82 -7.8 -4.56597 | gap 1 CTGGGCTTTTAAAAA CCAGG-GCC GCT GGCTCCCGG AAAGAGGAGAATTGT CBUD_0109 104719 - 104300 - | HesB protein family def2 104803 - 105444 + | peptide deformylase CBUD_0112 105441 - 105860 + | hypothetical membrane spanning protein CBUD_0111 106030 - 105857 - | rubredoxin TERM 131 106987 - 106965 - g 74 -9.9 -3.19463 | gap 1 TCTATCAGGCAGGAA CGCTATCCGG TAAT CCGG-TAGCG ATGGCGGCAGGGCTT hemL 106073 - 107380 + | glutamate-1-semialdehyde 2,1-aminomutase TERM 132 107703 - 107718 + G 71 -4.8 -4.66833 | opp_overlap 107703, overlap 107688 107687 107686 TCCGACGGCAGAAAA TATTTC CCGA GAAATA TTTTTAGCCTTGGAA queD 107377 - 107931 + | queuosine biosynthesis protein CBUD_0115 107934 - 108413 + | hypothetical exported membrane spanning protein TERM 133 108490 - 108476 - T 79 -11.4 -2.71712 | overlap 108475 GTCGTCCCCGCAAAG GCGCTG ACC CAGCGC ACGGCGTGCGCAGCG TERM 134 108503 - 108519 + T 91 -13.7 -2.52896 | opp_overlap 108514 108515 CGCACGGCGTGCGCA GCGCGCT AAA AGCGCGC TGGATTCCCGCCTGC CBUD_0117 108788 - 108648 - | hypothetical protein ponA 111179 - 108798 - | multimodular transpeptidase-transglycosylase PBP 1A TERM 135 109490 - 109474 - G 100 -13.7 -2.92667 | overlap 109454 109471 GCAACCTGTAAAGGA GGCAGCG TGG CGCTGCC AAGCGCTAGCGAAAG TERM 136 111319 - 111292 - g 72 -7.6 -3.82097 | overlap 111293 TTGAAACCCATGAAA TCCGAGCGGTGA AAGT TCGCCGCCGGGA AGATTGCTTGCATAT CBUD_0119 111249 - 112043 + | hypothetical protein TERM 137 112082 - 112092 + F 71 -4 -4.84219 | CAAAAATTGCAACGC CAAA AAA TTTG TTTGTTTTATAGTTT TERM 138 112204 - 112192 - f 81 -2.7 -5.64274 | CCATTTAGAAAAAAA GAAAA TTG CTTTC CTAACTAAGGAATTA TERM 139 112331 - 112304 - f 70 -5.6 -4.37092 | ATTTCGCCTATAAAA CTCATCTCGGAA GCGC TTCCGACACAAG GTATTCTAACAAAGT pilN 112400 - 112519 + | type 4 pili biogenesis protein TERM 140 112557 - 112571 + GF 80 -2.8 -5.4505 | overlap 112548 CACTTTGCTGCTCTT GCAACA GCT TATTGC TTTTTTCTTCGCCCA CBUD_0122 112482 - 112985 + | hypothetical protein TERM 141 113650 - 113638 - f 72 -3.3 -5.03314 | GTGACCTTCAAAAAA GCCAC TTT ACGGC TAAAAGTCACACCGG aroK 113966 - 114505 + | shikimate kinase aroB 114502 - 115581 + | 3-dehydroquinate synthase CBUD_0125a 115845 - 115660 - | hypothetical cytosolic protein TERM 142 115843 - 115853 + g 75 -3.2 -5.11063 | overlap 115837 115830 GAGGGGCTTGAAGAA CACT AAC GGTG TTTTTCTTAGCTCCT CBUD_0125b 116023 - 115868 - | hypothetical cytosolic protein CBUD_0126 116089 - 116355 + | hypothetical protein CBUD_0127 117602 - 116364 - | macrolide-efflux protein TERM 143 116861 - 116845 - G 75 -5.8 -4.65078 | ATATTCTTAACAAAA GGCGCT AATAA AACGCC TGCAGTCATAAACGA TERM 144 117813 - 117860 + r 78 -10.9 -3.09516 | gap 2, opp_overlap 117813 117821, overlap 117821 GCCCGTATGAGCGAA GCGAAATACGGGGACGATAGACG TCAT CGT-TGTT-TTCCCGTATTTCGC TTCGCTCATACGGGC CBUD_0130 118148 - 117936 - | hypothetical protein TERM 145 118095 - 118110 + g 100 -4.7 -5.91981 | CACTTGTTTTTTTAA CCCTT TCGCAT AAGGG TTTTTTTTCGCTTTT CBUD_0131 118438 - 118145 - | hypothetical cytosolic protein TERM 146 118441 - 118462 + H 73 -7.5 -4.07562 | GTATATCCCTCATGC TTACATTAT AATT ATAATGTAA TTTATGTCAAATTTC CBUD_0131a 118466 - 118654 + | hypothetical protein TERM 147 118896 - 118878 - g 70 -9.6 -2.80796 | opp_overlap 118877 118875, overlap 118877 TTTTATTATGGAAAT CCAACACG CCG CGTATTGG GTCTTCACTTGCATC CBUD_0133 118756 - 119310 + | hypothetical protein TERM 148 119810 - 119829 + G 72 -7.8 -3.78934 | TTTAAGTTATGGTTA TGCCGCTC CGGT GAGCGCCA TTATTATCAACCGCA TERM 149 120539 - 120507 - g 71 -8.4 -3.53811 | opp_overlap 120509, overlap 120509 CCTATTGGCGGCAAA GATGGAACGCTTGC CGGAC GCATGCGCTCCATT GCTAATTCCGAACGA TERM 150 120537 - 120509 - g 81 -11 -3.34715 | opp_overlap 120509, overlap 120507 TATTGGCGGCAAAGA TGGAACGCTTGC CGGAC GCATGCGCTCCA TTGCTAATTCCGAAC TERM 151 120509 - 120537 + G 71 -8.8 -3.27298 | opp_overlap 120509 120507 TATTGGCGGCAAAGA TGGAACGCTTGC CGGAC GCATGCGCTCCA TTGCTAATTCCGAAC TERM 152 120671 - 120654 - g 70 -9.9 -2.53715 | overlap 120653 GCGATCATGATTAAT GGTTTCG TTGG CGAAACC CATGCCTATAGTCAT dacB 119310 - 120743 + | D-alanyl-meso-diaminopimelate endopeptidase aroE 120736 - 121554 + | shikimate 5-dehydrogenase TERM 153 121655 - 121679 + G 85 -7.4 -4.79683 | opp_overlap 121655, overlap 121669 TTGAATGAATAAGTA TTTTTCTTTT CTCAC AAAAGAAAAA TTTCTTTTATACGTT CBUD_0135a 121644 - 121748 + | hypothetical protein TERM 154 121866 - 121888 + T 100 -13.5 -6.22691 | opp_overlap 121864 121863, overlap 121857 121860 AGGGATCACCAACCC GGGGTGGTT ATAGC AACCACCCC TTTTTTTTATTATTA CBUD_0136 122713 - 121901 - | hypothetical cytosolic protein TERM 155 122292 - 122307 + g 82 -3.2 -5.4505 | overlap 122293 GGCCTAACTAATTGC CGGAAG CGGT CTTCCA TTTTTTCTTGGACAG CBUD_0137 124231 - 122978 - | low-affinity inorganic phosphate transporter TERM 156 124198 - 124187 - G 81 -4.4 -5.26316 | CCATGCCATAAAAAA GCTA AAAA TAGC GGCCAGAATGATATA CBUD_0138 124308 - 125024 + | putative pit accessory protein xapA 125026 - 125847 + | xanthosine phosphorylase TERM 157 126534 - 126552 + G 71 -8.8 -3.34236 | overlap 126535 ATACGCTTCGGGGCC AGTCGGCT GTT AGCCGACA TTATGCAGTGCCTTT TERM 158 126535 - 126551 + G 88 -12.3 -2.6006 | overlap 126534 TACGCTTCGGGGCCA GTCGGCT GTT AGCCGAC ATTATGCAGTGCCTT deoC 125844 - 126569 + | deoxyribose-phosphate aldolase TERM 159 126960 - 126943 - g 74 -4.1 -5.00616 | opp_overlap 126925 TTTTTTCTTAAAAAA GAGTATC ATTA GAAACTC TATAAATGATGAAAT CBUD_0141 126653 - 127177 + | hypothetical cytosolic protein TERM 160 127229 - 127215 - T 80 -11.4 -2.84634 | CTGCATATCATTACA GCGCAC GGC GTGCGC TGCGCGCTAAAAGCG TERM 161 127230 - 127248 + T 89 -10.2 -4.16016 | overlap 127231 GCGCACGGCGTGCGC TGCGCGCT AAA AGCGCGCC TTTATTCCCGCCTGC TERM 162 127231 - 127247 + T 93 -13.7 -3.09288 | overlap 127230 CGCACGGCGTGCGCT GCGCGCT AAA AGCGCGC CTTTATTCCCGCCTG CBUD_0141a 127320 - 127210 - | hypothetical protein CBUD_0142 127879 - 127328 - | cold shock protein TERM 163 127511 - 127494 - G 73 -5.7 -4.42851 | GCAATAAACCCAAAA TCTTTTT CTTT AAAAAGA CGAACAATTTCACCC TERM 164 128152 - 128162 + G 91 -5.4 -5.65496 | opp_overlap 128152 AAACCAACCTTTAAA CAAG CTA CTTG TTTTTCTTTTTAATC TERM 165 128331 - 128319 - g 83 -9.1 -4.22283 | overlap 128314 CAAAAAAAGAGGAAA GCGCT CAG AGCGC TCCAATTAATGGTTT TERM 166 128453 - 128441 - g 80 -2.7 -5.48054 | ATTAAAATTAAAAAA TCAAA GGG CTTGA CCTGGCACGATTGTC TERM 167 128698 - 128675 - g 78 -2.3 -5.47218 | overlap 128677 GGGGAGTTAAAAAAA CTTTGCGGC TCGCTC GCCTCAATG GAAAAACGCCAACAG TERM 168 129204 - 129190 - g 78 -4.2 -5.16151 | opp_overlap 129190 CAAATTTAAGAAAAA TACCGC TCT GCGCTA TTTTGGAAGGCTATA TERM 169 130281 - 130265 - g 84 -5.1 -5.28176 | TTTATCGAGAAAAAA GACAAAC CTC GTTCGCC CTATGAGGTAACGCA CBUD_0143 128090 - 130519 + | hypothetical protein CBUD_0144 130757 - 131557 + | hypothetical cytosolic protein CBUD_0145 132075 - 131563 - | hypothetical cytosolic protein csrA2 132409 - 132203 - | carbon storage regulator CBUD_0146a 132627 - 132505 - | hypothetical protein rpiA 133436 - 132774 - | ribose 5-phosphate isomerase TERM 170 133505 - 133531 + r 70 -9.5 -2.5366 | gap 1, overlap 133504 133503 TTCAATTTTAGACTT CGTCATTCCTCG CAGG CGGGGA-TGACG GCTTTAATTTTTTAG CBUD_0148 134468 - 133578 - | acyltransferase family protein TERM 171 136354 - 136365 + r 75 -3 -5.1848 | GGACCATTCGAGCCC CTTT AGGG AAAG TTTTTTCAGTTCCTT CBUD_0151 137928 - 136834 - | 3-hydroxy-3-methylglutaryl-coenzyme A reductase TERM 172 137471 - 137455 - G 71 -6.6 -4.15044 | GGTGCCTCGAATAAA CTCACA TGCAT TGTGAG TACAAAAGGTAGTCA TERM 173 137497 - 137509 + g 91 -4.7 -5.64304 | overlap 137498 AGTCATATTCTGGCC CGCGG CTT CCGCA TTTTTTATTGTGTTG TERM 174 137498 - 137508 + g 77 -8.2 -3.96142 | overlap 137497 GTCATATTCTGGCCC GCGG CTT CCGC ATTTTTTATTGTGTT CBUD_0152 138965 - 138027 - | 3-oxoacyl-[acyl-carrier protein] reductase TERM 175 139343 - 139321 - g 76 -9.2 -3.56568 | overlap 139327 AGACTAAAATACTAA GAAAAACGCC GTT AGCGTTCTTC AAGCCCCTCTTAGCC TERM 176 139337 - 139327 - g 80 -4.6 -5.20606 | overlap 139321 AAATACTAAGAAAAA CGCC GTT AGCG TTCTTCAAGCCCCTC CBUD_0152a 139209 - 139487 + | hypothetical cytosolic protein CBUD_0153 140281 - 139580 - | 4'-phosphopantetheinyl transferase family CBUD_0154 140545 - 140285 - | acyl carrier protein CBUD_0155 141842 - 140568 - | 3-oxoacyl-[acyl-carrier-protein] synthase TERM 177 140629 - 140608 - G 91 -13.1 -2.6574 | opp_overlap 140613, overlap 140613 CAAGCATTGACATCA CCAAAGCCA AAGC TGGCTTTGG CTAAAACGTCGATTT TERM 178 140630 - 140613 - G 84 -9.9 -3.82218 | opp_overlap 140613, overlap 140608 ATTGACATCACCAAA GCCAAAG CTGG CTTTGGC TAAAACGTCGATTTG TERM 179 141072 - 141085 + g 70 -8.1 -3.70571 | GTAAATTCGAGCCCC GCGCT GCTC AGCGC TTTCCAATGTTTCTA TERM 180 141282 - 141268 - G 79 -7.8 -4.36914 | opp_overlap 141268 CCGCCCGCGAGAAAA CGGCAA GCC CTGCCG TTTTTCAAGGCATAA TERM 181 141268 - 141282 + g 78 -7.1 -4.57569 | opp_overlap 141268 CCGCCCGCGAGAAAA CGGCA AGCCC TGCCG TTTTTCAAGGCATAA CBUD_0156 142318 - 141839 - | (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase CBUD_0157 142939 - 142322 - | 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase TERM 182 142882 - 142905 + g 75 -2.4 -5.27023 | overlap 142890 142891 142896 CCCACGTTAATGCAA CCATTTCTTC TTTG GAAAAGGTGG TTTTCTTTTTGAAAT CBUD_0158 144102 - 143119 - | 3-oxoacyl-[acyl-carrier-protein] synthase III TERM 183 143233 - 143223 - G 86 -6.8 -5.00884 | opp_overlap 143222 ATCGTTGGGAAAAAA CGCT GGG AGCG CTTGCTGCACCGCAA TERM 184 144127 - 144182 + r 75 -9.6 -3.37732 | opp_overlap 144127 144129, overlap 144179 GTTTTATTATGAAAA TACCCTCTCCTCTGACTCCTTTCCCG CAAG CGGGAGAGGGGGTGGGGAAAAGGGGA TTATACAATTCCTCT prlC 146216 - 144183 - | oligopeptidase A TERM 185 145083 - 145067 - G 73 -8.7 -3.53012 | CGTCCGGGTGCCAAA CGTCAGC GGG ACTGACG GGCTTAATGGTTATT TERM 186 147258 - 147244 - R 75 -7.8 -4.07687 | AGTCTGTGGTTAAAA GCACTC ATT GAGCGC CGCGGAATGAATCGC CBUD_0160 147626 - 147354 - | hypothetical protein TERM 187 147638 - 147695 + r 75 -10.2 -3.14931 | gap 3, opp_overlap 147638 CCATATACGTATGAA GCGAAGCGAAATACGGGAAAACAAT-GAT GTC GTCTATCGTC--CCCGTATTTCGCTTCGC TTCATACGGGCTACC TERM 188 147695 - 147638 - R 93 -13.9 -3.21354 | gap 3, opp_overlap 147638 CCATATACGTATGAA GCGAAGCGAAATACGGGAAAACAAT-GA TGTCG TCTATCGTC--CCCGTATTTCGCTTCGC TTCATACGGGCTACC TERM 189 147927 - 147915 - R 70 -3.4 -4.88107 | opp_overlap 147915 TACAAAAAAAAAACA GGTT GAAAT AACC ATTGATTCAAAAGAA TERM 190 148415 - 148433 + r 71 -6.8 -4.11484 | overlap 148418 CAACCGTTACGGCCT TAAGTTTG ATA CAAGCTTA TTTTGGAGACTTACA TERM 191 148875 - 148865 - R 74 -4 -5.16237 | AATTTCATCAAAAAA GAAA ACC TTTC GTTCGCCAAAGAGTT pntB 150488 - 149118 - | NAD(P) transhydrogenase subunit beta TERM 192 149523 - 149539 + g 71 -2.3 -5.10163 | opp_overlap 149523 TCGTTCCATTAATAA TTTGG CGAGTTC CCAAA TTTTGTTTTGCGCTT pntAB 150784 - 150485 - | NAD(P) transhydrogenase alpha subunit TERM 193 151004 - 150982 - RH 79 -5.4 -4.98672 | overlap 150983 TTGAAAAACACAAAA CCCTCACGGC CGA GTCGGGAGGA TCCAGATTAAGAGGC TERM 194 151053 - 151015 - RH 100 -16.2 -3.28416 | opp_overlap 151017, overlap 151017 151029 GAGGATCCAGATTAA GAGGCTAAGAAAAACACC GAT GGCGCTTTTCTTAGCCTT TTAGCCGGGATTCCC TERM 195 151017 - 151051 + rH 100 -14.4 -4.08692 | opp_overlap 151015 151017 151029 GGATCCAGATTAAGA GGCTAAGAAAAACACC GAT GGCGCTTTTCTTAGCC TTTTAGCCGGGATTC TERM 196 151051 - 151017 - RH 100 -18.8 -3.20573 | opp_overlap 151017, overlap 151015 151029 GGATCCAGATTAAGA GGCTAAGAAAAACACC GAT GGCGCTTTTCTTAGCC TTTTAGCCGGGATTC TERM 197 151039 - 151029 - RH 76 -4.6 -5.09204 | opp_overlap 151017, overlap 151017 151015 AGAGGCTAAGAAAAA CACC GAT GGCG CTTTTCTTAGCCTTT pntAA 152426 - 151167 - | NAD(P) transhydrogenase alpha subunit TERM 198 152215 - 152194 - GH 89 -7.2 -4.98255 | GCCGAATCAGAAAAA CCAGCGCC TTCGCC AGCGCCGG CTTGCAATCGTATTT TERM 199 152865 - 152851 - gH 73 -2.8 -5.16572 | overlap 152853 AGCGAATTCAAAAAA TAGGTT TAA AACCAA AACCTGAAATTACCA CBUD_0167 152415 - 153287 + | (2R)-phospho-3-sulfolactate synthase TERM 200 153327 - 153348 + FH 72 -9.4 -3.04398 | overlap 153324 153326 153333 ACAGTTCCGTCATTT CGCGCAGG CGGAAT TCTGCGCG CTTTTAGCGCGCAGC TERM 201 153375 - 153405 + FH 86 -7.5 -5.09426 | gap 1, overlap 153333 153376 CAGCACACGAAGTGC GCTG-GGTCCCCGC CTTT GCGGGGACGACAGG TTTTTTGAAATTAGG TERM 202 153376 - 153404 + FH 83 -11 -3.64933 | gap 1, overlap 153333 153375 AGCACACGAAGTGCG CTG-GGTCCCCGC CTTT GCGGGGACGACAG GTTTTTTGAAATTAG CBUD_0169 153525 - 154097 + | hypothetical membrane spanning protein CBUD_0168 155653 - 154055 - | ABC transporter ATP-binding protein TERM 203 155573 - 155591 + g 74 -7.6 -3.94773 | opp_overlap 155586 GATTCCCACACGGTG TTTTTCAA AAA TTGAAAAA TTGATTTTTTCGATG CBUD_0170 155835 - 155719 - | hypothetical protein CBUD_0171 155897 - 156343 + | hypothetical membrane spanning protein TERM 204 156358 - 156399 + T 100 -6.6 -5.88197 | gap 1, overlap 156360 156360 156361 ATTACGCATACGCCA TTC-GTCCCACCATCCTGC ACGTG GGAGGATGGTGGGAAAGTA TTTTTTTGTGTTTAA TERM 205 156360 - 156396 + T 75 -9.4 -3.29802 | overlap 156358 156360 156361 TACGCATACGCCATT CGTCCCACCATCCTGC ACGTG GGAGGATGGTGGGAAA GTATTTTTTTGTGTT TERM 206 156360 - 156397 + T 88 -9.2 -4.5577 | gap 1, overlap 156360 156358 156361 TACGCATACGCCATT C-GTCCCACCATCCTGC ACGTG GGAGGATGGTGGGAAAG TATTTTTTTGTGTTT TERM 207 156361 - 156395 + T 90 -12.9 -2.55441 | overlap 156360 156360 156358 ACGCATACGCCATTC GTCCCACCATCCTGC ACGTG GGAGGATGGTGGGAA AGTATTTTTTTGTGT CBUD_0172 157588 - 156440 - | hypothetical ATPase TERM 208 156481 - 156503 + g 74 -4.1 -4.96028 | GATTCAACAAAAATT CGTTCACTG GTAGA CAGAGAATG TTATTTTTTTTAAAC TERM 209 157656 - 157620 - R 84 -8.2 -4.71061 | gap 1, overlap 157624 157642 ATCCACACCCAAAAA CCAAGCAAATTTCA-GT TATA ACGTGAAATTTGCCAGG TAAAATTCACCTGAA TERM 210 157652 - 157624 - R 77 -8.4 -3.83644 | gap 1, overlap 157620 157642 ACACCCAAAAACCAA GCAAATTTCA-GT TATA ACGTGAAATTTGC CAGGTAAAATTCACC CBUD_0172a 157892 - 157716 - | hypothetical membrane associated protein TERM 211 157908 - 157946 + r 77 -10.4 -3.28416 | opp_overlap 157910, overlap 157910 157922 GGGAATCCAGGCTAA AAGCCTAAGAAAAGCGCC ATC GGTGTTTTTCTTAGCCTC TTAATCTGGGTCCTC TERM 212 157910 - 157944 + r 91 -13 -3.20573 | opp_overlap 157910, overlap 157908 157922 GAATCCAGGCTAAAA GCCTAAGAAAAGCGCC ATC GGTGTTTTTCTTAGCC TCTTAATCTGGGTCC TERM 213 157944 - 157910 - R 82 -8.6 -4.15453 | opp_overlap 157910 157908 157922 GAATCCAGGCTAAAA GCCTAAGAAAAGCGCC ATC GGTGTTTTTCTTAGCC TCTTAATCTGGGTCC TERM 214 157922 - 157932 + r 76 -4.6 -5.09204 | opp_overlap 157910, overlap 157910 157908 AAAGCCTAAGAAAAG CGCC ATC GGTG TTTTTCTTAGCCTCT CBUD_0172b 158097 - 157939 - | hypothetical cytosolic protein TERM 215 158132 - 158153 + r 73 -7.1 -4.07568 | opp_overlap 158144 158148, overlap 158133 TAGGTTTCGTCATTC CCGCGCAGG GAAT CCAGCGCGC TTTTGGCGCGCAGCG TERM 216 158133 - 158152 + r 78 -10.6 -3.04398 | opp_overlap 158144 158148, overlap 158132 AGGTTTCGTCATTCC CGCGCAGG GAAT CCAGCGCG CTTTTGGCGCGCAGC TERM 217 158164 - 158148 - R 76 -10.8 -2.54896 | opp_overlap 158133 158132, overlap 158144 CGCGCAGGGAATCCA GCGCGC TTTTG GCGCGC AGCGCACGTGTGCGC glmU 159731 - 158364 - | UDP-N-acetylglucosamine pyrophosphorylase TERM 218 158468 - 158481 + g 75 -5.9 -4.66609 | AGAGTGTAGAGCCGG CGCCG ATGG TGGCG TTTTTGCCTACGGTG TERM 219 158665 - 158677 + g 91 -5.5 -5.72207 | TTCGCCTTGCTGCCT CTACC TAA GGTGG TTTTTTTCATTTCGA TERM 220 158822 - 158835 + g 77 -4.5 -5.0538 | overlap 158822 158821 GAATTTCGGTATTTT CACCG ACGG TGGTG TTTTTTAAAATAACG TERM 221 159106 - 159082 - G 86 -11.3 -3.29511 | overlap 159062 159084 159085 TGCACTTCTTCACAA CACTGGGCGGC CAC GCCGCCCACGG GGCAGCCTTCAGCTA TERM 222 159104 - 159084 - G 93 -12.5 -3.21593 | overlap 159062 159082 159085 CACTTCTTCACAACA CTGGGCGGC CAC GCCGCCCAC GGGGCAGCCTTCAGC TERM 223 159103 - 159085 - G 100 -16 -2.52742 | overlap 159062 159084 159082 ACTTCTTCACAACAC TGGGCGGC CAC GCCGCCCA CGGGGCAGCCTTCAG TERM 224 159182 - 159192 + g 71 -2.4 -5.17576 | TATTATTATTTAATT GGGG TAA CCAC TTTTTTAAATTCATC atpC 160178 - 159750 - | ATP synthase epsilon chain TERM 225 159863 - 159875 + g 83 -9.1 -4.08557 | CTTTCTGTTTGGCGA GCCGA CGT TCGGC TTCTTCTTTAGCGGA atpD 161753 - 160302 - | ATP synthase beta chain TERM 226 161282 - 161243 - G 82 -8 -4.56597 | gap 1 CCGCGCCTCCAAAAA GACCCACTTTGCCTCCCTT AGC AAAGG-GGCAAAGCAAATC GACCACTTTAATACC atpG 162658 - 161789 - | ATP synthase gamma chain TERM 227 162302 - 162273 - G 74 -9.3 -3.28791 | overlap 162260 ACGTTTCCCCCATAA CGGCGGAAAAAGG CTTC CCCTTTTCGACCG ATGACGCAGAGGTCC TERM 228 162706 - 162718 + r 79 -9.1 -3.79668 | opp_overlap 162697 162694 162693 162690, overlap 162715 AATCCAGGCGCGCCT TGCGC GCT GCGCA TTTCGTGCGTTGGAT atpA 164304 - 162757 - | ATP synthase alpha chain atpH 164869 - 164312 - | ATP synthase delta chain atpF 165339 - 164869 - | ATP synthase B chain TERM 229 165044 - 165060 + g 71 -2.2 -5.12785 | opp_overlap 165039 AGTTGTATAAGATGG GCGC CTTCCTCTC GCGC TTTATTTTTTGCTTC TERM 230 165440 - 165401 - R 83 -10.6 -3.62096 | gap 1, overlap 165409 165410 TGTCATTACCGCAAA GGCGTAAATCCAGACGCGC TTT GCGCG-CTGGGCCCCCGCC TTCGCGAGGACGACG TERM 231 165432 - 165409 - R 73 -8.8 -3.63968 | gap 1, overlap 165401 165410 CCGCAAAGGCGTAAA TCCAGACGCGC TTT GCGCG-CTGGG CCCCCGCCTTCGCGA TERM 232 165431 - 165410 - R 83 -12.3 -2.7806 | gap 1, overlap 165409 165401 CGCAAAGGCGTAAAT CCAGACGCGC TTT GCGCG-CTGG GCCCCCGCCTTCGCG atpE 165770 - 165468 - | ATP synthase C chain atpB 166582 - 165788 - | ATP synthase A chain TERM 233 166392 - 166408 + g 89 -12.3 -2.87931 | opp_overlap 166384 CCAGGAACGCTAGCC GTAGCGC GCC GCGCTAC TATATAAAAGATGAG atpI 167068 - 166583 - | ATP synthase protein I TERM 234 166849 - 166827 - G 70 -7.6 -3.59946 | overlap 166822 166828 166848 CTGGGAATGACACAA GCTGCGCCGC CCA GCAACGCAGA GAACACCTCTGTTGC TERM 235 166848 - 166828 - G 77 -11.1 -2.75647 | overlap 166822 166827 TGGGAATGACACAAG CTGCGCCGC CCA GCAACGCAG AGAACACCTCTGTTG CBUD_0184 167162 - 168340 + | hypothetical ATPase TERM 236 169328 - 169317 - g 75 -5.8 -4.61199 | AGCTTATATATAAAA TCCG ACGA CGGA AATCCTCTCGCCGAA CBUD_0185 168435 - 169937 + | hypothetical cytosolic protein TERM 237 170118 - 170084 - T 79 -8.6 -4.08692 | opp_overlap 170096, overlap 170085 GAATCCCGGCTAAAA CGCTAAGAAAAGCGCC ATC GGTGTTTTTCTTAGCC CCCTAATCTGGGTCC TERM 238 170117 - 170085 - T 82 -12.1 -3.04894 | opp_overlap 170096, overlap 170084 AATCCCGGCTAAAAC GCTAAGAAAAGCGCC ATC GGTGTTTTTCTTAGC CCCCTAATCTGGGTC TERM 239 170096 - 170106 + T 76 -4.6 -5.06414 | opp_overlap 170085 170084 AAACGCTAAGAAAAG CGCC ATC GGTG TTTTTCTTAGCCCCC CBUD_0185a 170228 - 170121 - | hypothetical cytosolic protein TERM 240 170351 - 170363 + r 70 -7.7 -3.76224 | overlap 170346 GTCGAAAAACTCCTC CCAAG GGT CTTGG TTTAATGCCTCCAGG TERM 241 170486 - 170513 + r 71 -7.6 -3.95378 | opp_overlap 170490, overlap 170487 170490 TTTTGCTCGGGTGCT ATAAGGCGCCAC ACAA GTGGCGCCTCGG TTATTTCGAATATAA TERM 242 170487 - 170512 + r 78 -11.1 -2.96745 | opp_overlap 170490, overlap 170486 170490 TTTGCTCGGGTGCTA TAAGGCGCCAC ACAA GTGGCGCCTCG GTTATTTCGAATATA TERM 243 170490 - 170509 + r 95 -15 -2.71369 | opp_overlap 170490, overlap 170487 170486 GCTCGGGTGCTATAA GGCGCCAC ACAA GTGGCGCC TCGGTTATTTCGAAT TERM 244 170509 - 170490 - R 100 -15 -3.28712 | opp_overlap 170487 170486 170490 GCTCGGGTGCTATAA GGCGCCAC ACAA GTGGCGCC TCGGTTATTTCGAAT TERM 245 170979 - 171001 + r 85 -8.6 -4.31835 | TCGCCATTTTGATCA GGATGTTTTT GAA AAAAACATTC TTTGTTATAGCCATT TERM 246 171092 - 171103 + r 73 -7.2 -3.98747 | opp_overlap 171091 171092 TTTGCTATAAAAATC CGCC AACT GGCG TTTCGTGATTTTTTC TERM 247 171587 - 171609 + r 79 -3.4 -5.42259 | opp_overlap 171579 CCAACTAGAGCTTCT TCGTTGCT CATAAGC AGCATCGA TTTTTTTGGAAATAA CBUD_0189 173589 - 172735 - | hypothetical DNA-binding protein TERM 248 173805 - 173780 - g 80 -3.9 -5.27769 | overlap 173788 AGAAAAAAGTAAAAA GCCGAAAACAA GCGA TAGCTATCGGC TTGTCGAAGGCTCGT CBUD_0190 173661 - 173822 + | hypothetical protein CBUD_0191 174001 - 173870 - | hypothetical protein CBUD_0191a 174311 - 174021 - | hypothetical protein CBUD_0192 174575 - 174393 - | hypothetical protein TERM 249 174634 - 174650 + r 75 -5.9 -4.67038 | GTCCACTTTTACATT GAAGTCA AAA TGATTTC TTTTCCTTTTAAGCG CBUD_0193 176009 - 174627 - | transporter, MFS superfamily CBUD_0194 178819 - 176009 - | acyl-CoA synthetase TERM 250 176425 - 176436 + g 71 -4.4 -4.83615 | TGACGAGGTCAAGTT GCTT GACG AAGC TTTTTATGACGGGTG TERM 251 176640 - 176650 + g 82 -4.6 -5.40072 | opp_overlap 176640 GCCCAAAACCGAAAA GCGG CGG CTGC TTTTTTTCGAGGCAG TERM 252 176984 - 176994 + g 93 -4 -5.86465 | overlap 176989 TATTTCTTTTTTTAT TTCA GGA TGAA TTTTTTTATCTTCTT parB 179701 - 178829 - | chromosome partitioning protein parA 180462 - 179692 - | chromosome partitioning protein TERM 253 180159 - 180146 - G 70 -8.1 -3.65199 | AATGCTTCATCTAAA CAGCG CTCA CGCTG GCCCGTTTTTAAAAG TERM 254 180380 - 180362 - G 75 -7.3 -4.37247 | overlap 180364 AAATCAATTAATAAA GAGCGGC GTTTA GCCGCGC CCAAGGAAGCCGCCA TERM 255 180378 - 180364 - G 75 -8.5 -3.77023 | overlap 180362 ATCAATTAATAAAGA GCGGC GTTTA GCCGC GCCCAAGGAAGCCGC gidB 181083 - 180469 - | methyltransferase gidA 182998 - 181115 - | glucose inhibited division protein A CBUD_0198a 183099 - 182890 - | hypothetical cytosolic protein TERM 256 183270 - 183310 + r 82 -8.3 -4.19746 | opp_overlap 183266 183269 183274, overlap 183274 CGTACAGTGAAGAAT TGAATTCCCCGTATGGAGC GAA GCGGAATACGGGGAATTGA TTATTTTCCGATACA TERM 257 183274 - 183306 + r 76 -9.1 -3.68798 | opp_overlap 183266 183274 183269, overlap 183270 CAGTGAAGAATTGAA TTCCCCGTATGGAGC GAA GCGGAATACGGGGAA TTGATTATTTTCCGA TERM 258 183306 - 183274 - R 72 -9.1 -3.29459 | opp_overlap 183270 183274, overlap 183266 183269 CAGTGAAGAATTGAA TTCCCCGTATGGAGC GAA GCGGAATACGGGGAA TTGATTATTTTCCGA trmE 184732 - 183311 - | tRNA (5-carboxymethylaminomethyl-2-thiouridylate) synthase TERM 259 183783 - 183796 + g 71 -3.1 -4.96848 | gap 1, overlap 183785 AATAATAATAGATCG GCCTGT TGA AC-GGC TTTTTGTGTACGGCG TERM 260 184345 - 184368 + g 74 -10.2 -2.72263 | gap 1, opp_overlap 184326, overlap 184344 GTTCAGAAAATTCCC CCGG-GCGGGC TTG GCGCGCGCCGG CTTTCAAAACGGTAT CBUD_0199a 185116 - 184946 - | hypothetical protein TERM 261 185182 - 185192 + r 82 -8.2 -4.59424 | CTTTTCCGCTTCCGA GCGC GCC GCGC TTTTAATTTCGCTTT yidC 186863 - 185163 - | 60 kDa inner membrane protein TERM 262 185734 - 185717 - G 84 -2.7 -5.61689 | AAAACCAATAAAAAA CGATTTT GATC AGAATCG TCGTGATAATAATAG CBUD_0202 187037 - 186867 - | hypothetical cytosolic protein TERM 263 186927 - 186901 - G 78 -7.2 -4.42386 | overlap 186921 TTTTCAGGCACAAAA TCAACCCCACCA GGA TGGAAGGGGTGA CACCGCAGTAAGCGC TERM 264 186996 - 186973 - G 70 -9.6 -2.78816 | opp_overlap 186978, overlap 186978 186988 CTACCCTTTATCACA CCAAACCGCT TTAA AGCGGTTTCG GCATAACAAGAACAC TERM 265 186991 - 186978 - G 72 -8.1 -3.86202 | opp_overlap 186978, overlap 186973 186988 CTTTATCACACCAAA CCGCT TTAA AGCGG TTTCGGCATAACAAG rnpA 187441 - 187073 - | ribonuclease P protein component rpmH 187572 - 187438 - | LSU ribosomal protein L34P TERM 266 187969 - 187983 + H 70 -9.2 -3.25598 | overlap 187968 187974 GCTTAAGGGTCCCTC GTCGGC GAA GCCGGC TGCTTTGTTTTAAGC TERM 267 188086 - 188069 - H 70 -5.7 -4.37211 | CAAAGTTAGAATAAA TTTTTCT CCCT AGAAAAA GGATTCCTTTCATGG CBUD_0206 188098 - 188538 + | universal stress protein A sun 189817 - 188525 - | 16S rRNA m(5)C 967 methyltransferase glyS 191892 - 189814 - | glycyl-tRNA synthetase beta chain TERM 268 190228 - 190211 - G 71 -7 -4.07687 | ATTCGGCGGTCAAAA TCCAGC GGATCA GCTGGA TGGCTGGCCAGAACG glyQ 192845 - 191886 - | glycyl-tRNA synthetase alpha chain TERM 269 193167 - 193129 - H 86 -11.8 -3.2794 | opp_overlap 193131, overlap 193130 193143 GGGGACCCAGATTAA GGGGCTAAGAAAAACACC GAT GGCGCTTTTCTTAGCCTT TTAGCTTGGATTCCC TERM 270 193166 - 193130 - H 95 -15.3 -2.5655 | opp_overlap 193131, overlap 193129 193143 GGGACCCAGATTAAG GGGCTAAGAAAAACACC GAT GGCGCTTTTCTTAGCCT TTTAGCTTGGATTCC TERM 271 193131 - 193165 + H 100 -14.4 -4.29845 | opp_overlap 193130 193129 193143 GGACCCAGATTAAGG GGCTAAGAAAAACACC GAT GGCGCTTTTCTTAGCC TTTTAGCTTGGATTC TERM 272 193153 - 193143 - H 76 -4.6 -5.06816 | opp_overlap 193131, overlap 193130 193129 AGGGGCTAAGAAAAA CACC GAT GGCG CTTTTCTTAGCCTTT CBUD_0208a 193183 - 193302 + | hypothetical cytosolic protein TERM 273 193310 - 193334 + F 70 -9.9 -2.71712 | opp_overlap 193329, overlap 193309 TTAGTTGACGCCTAT GCGCGCAGG TGGGAAT CCAGCGCGC CTTTGGCGCGCAGCG TERM 274 193345 - 193329 - f 95 -15.1 -2.52896 | opp_overlap 193310 193309 GCAGGTGGGAATCCA GCGCGCC TTT GGCGCGC AGCGCACATAGTGCG TERM 275 193347 - 193361 + G 81 -11.4 -2.87564 | CGCCTTTGGCGCGCA GCGCAC ATA GTGCGC TGTGTCCCCGCCTGC CBUD_0208b 193337 - 193402 + | hypothetical protein com1 194234 - 193476 - | outer membrane protein rpoH 195126 - 194260 - | RNA polymerase sigma-32 factor CBUD_0211 195110 - 195277 + | hypothetical protein TERM 276 195346 - 195319 - g 78 -10.6 -3.3039 | opp_overlap 195316, overlap 195311 195322 GAAAAATGAATTCAA CCAGTCGGTAGG TGTT CCTACCAACTGC CAGCTTCCTCTCCCG TERM 277 195343 - 195322 - g 77 -10.9 -2.808 | opp_overlap 195316, overlap 195319 195311 AAATGAATTCAACCA GTCGGTAGG TGTT CCTACCAAC TGCCAGCTTCCTCTC TERM 278 195355 - 195374 + G 70 -9.2 -2.78032 | overlap 195354 195359 CAACTGCCAGCTTCC TCTCCCGC GTCC GCGGGGGG CTGTTTTAGCAGGGC TERM 279 195787 - 195814 + G 72 -7.6 -3.84719 | gap 1 TTGGTTGAATGAACC GTCCCGCCGT-GC TGC GCTGCGGCTGGGC TTTAAGTTTGAAGGT CBUD_0212 195296 - 196012 + | ribosomal-protein-serine acetyltransferase TERM 280 196198 - 196224 + T 90 -3.7 -6.02919 | opp_overlap 196197 TGTTTTTAATTGAAG CTCACTTTCGA TTCCT TCGACAATGAG TTTTTTTGTTTCTAG CBUD_0212a 196443 - 196177 - | Fic family protein ftsX 197433 - 196492 - | cell division protein TERM 281 196592 - 196575 - G 70 -5.7 -4.40882 | opp_overlap 196575 TAGAAATTAAAATAA TAAAAAC TCCC GTTTTTA TGCTTAATCCATGGA TERM 282 196740 - 196724 - G 85 -2.2 -5.77853 | overlap 196737 AAGCCGTAAAAAAAA CCGC GATATAAAA GCGG GCGCCGAATGAAAGA TERM 283 196766 - 196756 - G 71 -8.2 -3.54146 | overlap 196754 GCGCCGAATGAAAGA GGGC GTT GCCC CGACCAGCTTGAGAA ftsE 198083 - 197430 - | cell division ATP-binding protein TERM 284 197721 - 197738 + g 100 -8.3 -4.87803 | opp_overlap 197721 ACCGACTTTATCCAA CGCAGCG CGAA CGCGGCG TTTTATTTCGGAGTG ftsY 199064 - 198090 - | cell division protein TERM 285 199384 - 199400 + G 78 -5.8 -4.89009 | opp_overlap 199384, overlap 199395 AATTGTCAAAGAAGA CCATCG AGCGC CGGTGG TTTTTACTTCCGTGT CBUD_0217 199253 - 200632 + | peptidase, M16 family TERM 286 201121 - 201131 + G 81 -5.4 -5.09204 | TCGCCAAACGTTGTC GCTT CAA AAGC TTTTTATTCGGCTAT TERM 287 201380 - 201404 + G 73 -3.5 -5.00616 | opp_overlap 201380, overlap 201382 201384 AAGCGATAACAGCAA GCGGTGTGTTG CGG CAACAAATCCC TTTTTTAGCGCAACA TERM 288 201425 - 201380 - g 73 -9.1 -3.42861 | opp_overlap 201380 201382 201384 AAGCGATAACAGCAA GCGGTGTGTTGCGGCAACAAA TCCC TTTTTTAGCGCAACAAACCAC GATTATTTTAGGGCA CBUD_0218 200632 - 201963 + | non-proteolytic protein, peptidase family M16 TERM 289 202027 - 201990 - f 74 -9.2 -3.45023 | opp_overlap 201990 CTATCATTACCACAA GCGGGAATGACGAA AAACTTAAAG CCCGTCATCCCCGC TCCTTTCGTCATCCC TERM 290 202075 - 202061 - f 80 -11.4 -2.87564 | GCAGGCGGGGACACA GCGCAC TAT GTGCGC TGCGCGCCAAAGGCG TERM 291 202077 - 202093 + F 95 -15.1 -2.52896 | opp_overlap 202087 202088 CGCACTATGTGCGCT GCGCGCC AAA GGCGCGC TGGATTCCCACCTGC TERM 292 202112 - 202088 - f 70 -9.9 -2.71712 | opp_overlap 202077, overlap 202087 CGCTGCGCGCCAAAG GCGCGCTGG ATTCCCA CCTGCGCGC ATAGGCGTCAACTTA TERM 293 202248 - 202296 + F 90 -13.3 -2.87211 | opp_overlap 202256 AGTCACGGGAATCCC GGCTAAAAGGCTAAGAAAAGCGC ATC GTGTTTTTCTTAGCCCCTTAACC TGTGTCCCCCCGACT TERM 294 202288 - 202256 - f 91 -12.1 -4.08692 | opp_overlap 202248 GAATCCCGGCTAAAA GGCTAAGAAAAGCGC ATC GTGTTTTTCTTAGCC CCTTAACCTGTGTCC CBUD_0220 202459 - 203040 + | methyltransferase TERM 295 203077 - 203035 - T 77 -6.4 -4.58685 | opp_overlap 203037 203043, overlap 203036 203037 203043 AAAGGTGTTGAAAAA GGGTGAAATACGGGAAAT AACGTCA ATTTCCCGTATTTCGCTT CGCTCATACGTATAT TERM 296 203076 - 203036 - T 75 -9.9 -3.34488 | opp_overlap 203037 203043, overlap 203035 203037 203043 AAGGTGTTGAAAAAG GGTGAAATACGGGAAAT AACGTCA ATTTCCCGTATTTCGCT TCGCTCATACGTATA TERM 297 203037 - 203075 + T 100 -15.6 -3.10343 | opp_overlap 203036 203035 203037 203043, overlap 203043 AGGTGTTGAAAAAGG GTGAAATACGGGAAAT AACGTCA ATTTCCCGTATTTCGC TTCGCTCATACGTAT TERM 298 203075 - 203037 - T 90 -13.4 -2.60211 | opp_overlap 203037 203043, overlap 203036 203035 203043 AGGTGTTGAAAAAGG GTGAAATACGGGAAAT AACGTCA ATTTCCCGTATTTCGC TTCGCTCATACGTAT TERM 299 203043 - 203069 + T 79 -9.6 -3.77219 | opp_overlap 203043 203037 203036 203035, overlap 203037 TGAAAAAGGGTGAAA TACGGGAAAT AACGTCA ATTTCCCGTA TTTCGCTTCGCTCAT TERM 300 203069 - 203043 - T 79 -9.6 -3.68853 | opp_overlap 203037 203043, overlap 203037 203036 203035 TGAAAAAGGGTGAAA TACGGGAAAT AACGTCA ATTTCCCGTA TTTCGCTTCGCTCAT CBUD_0221 204235 - 203243 - | transposase CBUD_0223 204338 - 204454 + | hypothetical protein CBUD_0223a 205317 - 204451 - | transposase TERM 301 204550 - 204564 + g 76 -7.8 -4.07687 | GCGATTCATTCCGCG GCGCTC AAT GAGTGC TTTTAACCACAGACT TERM 302 207520 - 207498 - g 75 -3.3 -5.09426 | overlap 207499 CCGAACGTTAAAAAA CGAGTAGCC ATCGA GGCCGCTCA TCCCGATTATTGGTA tkt 205650 - 207671 + | transketolase gap 207686 - 208690 + | glyceraldehyde 3-phosphate dehydrogenase TERM 303 209431 - 209445 + G 78 -7.2 -4.56597 | TTAATCGTAGGCGGT GGTATT GCA AATACC TTTTTAAAAGCGCAG pgk 208762 - 209976 + | phosphoglycerate kinase pyk 209963 - 211417 + | pyruvate kinase CBUD_0228 213019 - 211421 - | hypothetical protein TERM 304 212616 - 212628 + g 77 -3.5 -5.20154 | CCCGTTTTAGCACGA TAATA GGC TATTA TTTTTTCAGTTATAT TERM 305 212857 - 212843 - G 88 -10 -4.15788 | AAGGGGGCTAAGAAA CCTTCC CGA GGAAGG CAAAATAACCGAAGT TERM 306 213113 - 213160 + H 75 -10 -3.1505 | gap 1, opp_overlap 213113 213119 213124 AGTAGCCCGTATGAA GCGAAACGAAATACGG-GAATTG CAT TATTTCCCCGTATTCCGCTTCGC TTCATACGGGCTACT TERM 307 213160 - 213113 - H 100 -15.1 -3.1505 | opp_overlap 213113, overlap 213119 213124 AGTAGCCCGTATGAA GCGAAACGAAATACGGGAA TTGCATTATT TCCCCGTATTCCGCTTCGC TTCATACGGGCTACT TERM 308 213154 - 213119 - H 70 -7.7 -3.78329 | opp_overlap 213113, overlap 213113 213124 CCGTATGAAGCGAAA CGAAATACGGGAA TTGCATTATT TCCCCGTATTCCG CTTCGCTTCATACGG fba 213256 - 214347 + | fructose-bisphosphate aldolase CBUD_0230 214410 - 214595 + | hypothetical protein CBUD_0231 215533 - 214610 - | hypothetical protein CBUD_0232 216213 - 215704 - | hypothetical protein yihA 216355 - 216972 + | GTP-binding protein TERM 309 217050 - 217032 - f 93 -7.4 -5.40072 | overlap 217033 GCCTTTTCAAAAAAA CTGGGGTA AAG TACCCCAC CATTGAAATCCCTTC TERM 310 217049 - 217033 - f 86 -10.9 -3.83561 | overlap 217032 CCTTTTCAAAAAAAC TGGGGTA AAG TACCCCA CCATTGAAATCCCTT TERM 311 217947 - 217959 + G 79 -7.7 -4.40132 | overlap 217952 GGCCATCATTTATGT CATCG TCA CGATG TTTATTGTGATTGCT TERM 312 218436 - 218454 + G 73 -3.9 -5.03747 | gap 1, overlap 218436 218437 CAATGCATCTCGCAT C-GTGCAA CCGA TTGCACAG TTTTTTGCAGCGTTT CBUD_0234 217207 - 218952 + | ABC transporter permease protein TERM 313 218973 - 218994 + F 70 -5.9 -4.33739 | gap 1 AGGTTTTAATTCGTG CTCTATCTCC TTG GGAGA-GGAG TTTTAAAATTTTTTA CBUD_0235 219050 - 220366 + | ABC transporter ATP-binding protein TERM 314 220382 - 220421 + G 74 -10 -3.07816 | opp_overlap 220362 220360 220382 220402 220403 220405 220406, overlap 220405 CCCGTATGCAGCGAA GCGGAATACGGGGAAC AAAAGCAC GGATCCCGTATTCCGC TTCGCTGCATACGGG CBUD_0235a 220372 - 220473 + | hypothetical protein TERM 315 220625 - 220607 - g 81 -9.6 -3.75024 | opp_overlap 220610, overlap 220610 TGGGACGATGAATAA CAAGGTGG TTA CCACCTTA GCTAAGGCCTTGGAC TERM 316 220622 - 220610 - g 80 -9.1 -4.00445 | opp_overlap 220610, overlap 220607 GACGATGAATAACAA GGTGG TTA CCACC TTAGCTAAGGCCTTG CBUD_0236 220470 - 221087 + | alpha/beta hydrolase CBUD_0237 221150 - 221611 + | hypothetical protein TERM 317 221867 - 221878 + G 75 -2.2 -5.34381 | TGATCCTGTGCAAAT TCGC GTGC GTGA TTTTTATTTGAGTTT feoA 221673 - 221942 + | ferrous iron transport protein A TERM 318 221987 - 221997 + G 76 -6.8 -4.47707 | CGGGAATCCCAATTG CGGT AAA ACCG TTGTTTTTAATGCGC TERM 319 223495 - 223513 + G 81 -7.4 -4.64613 | TCGTGATGGAGTTAC CGCCGTAT CAC ATACCGCG TTTTAGTTCTTTGTG TERM 320 224363 - 224342 - g 71 -4.3 -4.7923 | opp_overlap 224342 ATTTAAAGAAAGAAA TCTCTGGCG CTTG CGGCCGAGA TTTTTAAAAAAACGC feoB 221943 - 224393 + | ferrous iron transport protein B TERM 321 224428 - 224411 - g 77 -6.3 -4.73613 | TTATTATCAATAAAA GCATTCT TAAA AGAACGC CAATCCGCCAATTTA TERM 322 224554 - 224523 - g 70 -2.8 -5.00138 | gap 1, overlap 224524 224542 TACGCAAAGGAAAAA TCCGCTGCCAG-GAA AAA CCCGCCGGCTGCGGC ACAAAATGCCAACGC CBUD_0240 224393 - 224611 + | hypothetical protein TERM 323 224667 - 224714 + TF 84 -12.8 -3.09516 | opp_overlap 224667 224673 224684 224687, overlap 224673 GCCCGTATGAGCGAA GCGAAATACGGGGAAAACAATG ATGT CATCATCGTCCCCGTATTTCGC TTCGCTCATACGGGC TERM 324 224714 - 224667 - Tf 100 -19.4 -3.09516 | opp_overlap 224667 224673, overlap 224673 224684 224687 GCCCGTATGAGCGAA GCGAAATACGGGGAAAACAATG ATGT CATCATCGTCCCCGTATTTCGC TTCGCTCATACGGGC TERM 325 224708 - 224673 - Tf 79 -9.8 -3.77219 | opp_overlap 224667 224673, overlap 224667 224684 224687 ATGAGCGAAGCGAAA TACGGGGAAAACAATG ATGT CATCATCGTCCCCGTA TTTCGCTTCGCTCAT CBUD_0240a 225093 - 224737 - | hypothetical protein TERM 326 225155 - 225167 + Gr 79 -3.3 -5.34555 | opp_overlap 225155 CTAACAAAAATGCAA CTAGC CTC GCTCG TTTTTTGTCCTGTAG CBUD_0240b 225092 - 225199 + | hypothetical protein CBUD_0242 226560 - 225223 - | hypothetical ATPase TERM 327 226652 - 226638 - H 70 -2.8 -5.00884 | ATTTTGGTTAAAAAA GCAACA AAA TGCTAC AATATTGAAACAGTT CBUD_0243 226718 - 228100 + | FAD dependent oxidoreductase TERM 328 228278 - 228266 - g 77 -6.3 -4.63218 | opp_overlap 228265 228266 GCGGCTGCAATAAAA TGTTC GCT GAACA ATTTGGTTATAAGGA TERM 329 229317 - 229327 + G 71 -6.8 -4.09864 | opp_overlap 229317 CGCTGCTTTAACGAA GCTC GAG GAGC TTTTAGAACCTGAAT TERM 330 229816 - 229800 - g 75 -5.9 -4.59882 | TGAAAAAAGAAATAA CAATAAC AAG GTCATTG ATTGGACTTCGGCGA TERM 331 229931 - 229921 - g 81 -5.4 -5.23316 | GAGGATATTAAAAAA GCTT TCG AAGC CAATGATCGCAAAGC CBUD_0244 228154 - 230127 + | two component system histidine kinase TERM 332 230328 - 230350 + T 70 -9.2 -3.17212 | opp_overlap 230334, overlap 230334 CGCCTAAAATGCTGA GAAAAGCGCC ATC GGTGTTTTTC TTAATGCCCTAATAA TERM 333 230334 - 230344 + T 76 -4.6 -5.1356 | opp_overlap 230334, overlap 230328 AAATGCTGAGAAAAG CGCC ATC GGTG TTTTTCTTAATGCCC CBUD_0244a 230477 - 230316 - | hypothetical protein TERM 334 230446 - 230391 - G 95 -12.9 -3.05647 | gap 1, opp_overlap 230395 230400 230426, overlap 230395 CGGTAATGATATATA TGAAGCGCAGCG-AATACGGGA TTGCATTATTATT TCCCGTATTCCGCTTCGCTTCA TACGGGCTACTTTTA TERM 335 232180 - 232170 - g 88 -3.2 -5.81412 | GCTATTGAAAAAAAA CAGA CTG CCTG TGCCAAATTTATATT CBUD_0245 230535 - 233090 + | ankyrin repeat protein TERM 336 233808 - 233797 - f 80 -4.4 -5.35224 | GTCATAAAAACAAAA TTGG CACG CCAA TCAAAATAATGCTGT CBUD_0245c 234327 - 234452 + | hypothetical protein TERM 337 234994 - 234978 - g 70 -3.6 -4.74801 | overlap 234979 GAACCCGATGAAAAA GCGCGT AAAAA ACGCGA GCGGGTTAAACGGTC CBUD_0247 234462 - 235058 + | hypothetical protein CBUD_0248 235496 - 235080 - | hypothetical cytosolic protein CBUD_0249 236808 - 235570 - | hypothetical protein CBUD_0250 238106 - 236844 - | hypothetical protein TERM 338 238178 - 238160 - R 86 -10.4 -4.07107 | ATAATACAGCATAAA GCTTAAGA TAA TCTTAAGC TCCGCCCTCGTAGTA bph2_2 238663 - 238214 - | bacterial DNA-binding protein TERM 339 238586 - 238605 + gr 82 -5.6 -5.06414 | gap 1, overlap 238581 238580 238593 TTTTCTTTTTGCAGT CGGCCTGCG CCG CGCTG-CCG TTTTTCTTGCGCCGG CBUD_0251a 238757 - 238635 - | hypothetical protein TERM 340 238797 - 238814 + H 70 -7.7 -3.63895 | overlap 238798 TTCGCACGCGATTCC TGCCTTC GGGC GAAGGCG TTTGGGGTGCTTGCA rplM 238892 - 239320 + | LSU ribosomal protein L13P rpsI 239339 - 239758 + | SSU ribosomal protein S9P sspA 239789 - 240451 + | stringent starvation protein A sspB 240441 - 240857 + | stringent starvation protein B TERM 341 241469 - 241483 + G 71 -8.5 -3.42503 | AGTCTCAGCGATTTT GCCGC CAAAA GCGGC TTATGCGTATTCAAA CBUD_0256 240945 - 241637 + | membrane endopeptidase, M50 family TERM 342 241619 - 241629 + T 70 -3.2 -5.00616 | opp_overlap 241625, overlap 241625 AATTTTTGGGCTGCC GGGA AAT TTCC TTTTTTAAAAAGAGA TERM 343 241875 - 241833 - T 100 -26.4 -3.4072 | opp_overlap 241834 241837, overlap 241834 241837 CATTCCGCAGGAGAA TCCAGGCGCACCTTCGTGCG CTG CGCACGAAGGTGCGCCTCGT TCTCACCTTCGGGGG TERM 344 241874 - 241834 - T 100 -29.9 -2.64218 | opp_overlap 241834 241837, overlap 241833 241837 ATTCCGCAGGAGAAT CCAGGCGCACCTTCGTGCG CTG CGCACGAAGGTGCGCCTCG TTCTCACCTTCGGGG TERM 345 241834 - 241874 + T 100 -29.9 -3.36492 | opp_overlap 241834 241833 241837, overlap 241837 ATTCCGCAGGAGAAT CCAGGCGCACCTTCGTGCG CTG CGCACGAAGGTGCGCCTCG TTCTCACCTTCGGGG TERM 346 241837 - 241871 + T 100 -30.2 -2.84794 | opp_overlap 241834 241833 241837, overlap 241834 CCGCAGGAGAATCCA GGCGCACCTTCGTGCG CTG CGCACGAAGGTGCGCC TCGTTCTCACCTTCG TERM 347 241871 - 241837 - T 100 -30.2 -2.61548 | opp_overlap 241837 241834, overlap 241834 241833 CCGCAGGAGAATCCA GGCGCACCTTCGTGCG CTG CGCACGAAGGTGCGCC TCGTTCTCACCTTCG CBUD_0257 242620 - 242045 - | lipoprotein TERM 348 242340 - 242358 + g 71 -4.4 -4.87291 | opp_overlap 242329 GTAATCTGGTAAGCC CGATCGCG TAA CGCTACCG TTTTTGCTTGACCTA gmhA 243219 - 242620 - | phosphoheptose isomerase CBUD_0259 243587 - 243225 - | endonuclease CBUD_0260 244827 - 243637 - | lipoprotein antigen TERM 349 243831 - 243846 + g 73 -9 -3.44848 | opp_overlap 243830 243831, overlap 243829 AACGAGGCCATAAAG CGCGAA TGCG TTCGCG TGTTTGCTGAAGGGA CBUD_0260a 244841 - 245008 + | hypothetical protein TERM 350 245457 - 245478 + G 75 -2.2 -5.26119 | gap 1, overlap 245459 TCGCCGCTTTGGTGG CG-TCCGGC TTGCC GACGGATCG TTTTATTTTTGAAGG TERM 351 245729 - 245710 - g 71 -2.1 -5.09225 | opp_overlap 245712, overlap 245712 245725 AGCGGAGTTAAAAAA CTGGATT AATGAA AATCCTG TTCAGGAAAAGGGAG CBUD_0263 245090 - 245947 + | tetrapyrrole (corrin/porphyrin) methylase family protein ihfB 246251 - 245913 - | integration host factor beta-subunit TERM 352 246131 - 246147 + g 76 -10.1 -3.28003 | opp_overlap 246130 GAATTTCGATACGAT CGCCCTG ACC CAGGGTG TTGCTCATGTATTCC purN 246984 - 246337 - | phosphoribosylglycinamide formyltransferase purM 248072 - 246981 - | phosphoribosylformylglycinamidine cyclo-ligase TERM 353 248426 - 248412 - gH 71 -6.4 -4.17657 | overlap 248414 GATGAGAGCGGAAAA CAGCAG CTC CTGCTA CAAGTCGTTTTTGAC TERM 354 249088 - 249070 - gH 82 -2.4 -5.65496 | opp_overlap 249043 249071 249080, overlap 249041 249071 TATTAAAAATAAAAA CCATCG GTAATCT CGATGA TTTAGTGAAATCGTT CBUD_0266 248100 - 249245 + | hypothetical protein hda 249179 - 249961 + | DnaA-related protein CBUD_0268 251961 - 250060 - | hypothetical membrane spanning protein TERM 355 250378 - 250368 - G 82 -2.4 -5.64421 | AGGCTAAATAAAAAA GGCC AGT GGCA TATACCGTGTCCATG TERM 356 250636 - 250620 - G 71 -8.7 -3.34344 | TCATCTCTGAATTAA TCACGGC CAG ACCGTGA GCGCTGCCGAATAAT TERM 357 252023 - 252013 - R 74 -4 -5.00895 | CTTATTAGATAAAAA CTTA AAT TAAG AGAAAATTGGGCCTC CBUD_0270 253270 - 252104 - | D-3-phosphoglycerate dehydrogenase CBUD_0271 254661 - 253270 - | sodium/proline symporter TERM 358 253444 - 253425 - G 86 -5.7 -5.28778 | overlap 253439 253440 ACCAGCCAGAAAAAA CAGCGAT TAAAAG ACCGCTG AGTGGCAGCATAATA TERM 359 253973 - 253963 - G 73 -8.2 -3.68222 | TCCTAATGCCAATAA CGCG ATA CGCG CCGTCACTCGGTGAA CBUD_0272 254690 - 255466 + | phosphoserine phosphatase TERM 360 256123 - 256139 + G 71 -2.2 -5.0917 | gap 1 AAACATCGAAATGAG CCGCGCG GAAT TG-GCGG TTTATTTTTTGATGA hemF 255556 - 256506 + | coproporphyrinogen III oxidase TERM 361 256559 - 256578 + G 84 -10 -3.80537 | opp_overlap 256558, overlap 256558 AAATTCTTATTACAT GCGCTTGA TATA TCAGGCGC TATTTTCGCTTTCTT CBUD_0274 256541 - 257158 + | N-ribosylnicotinamide transporter TERM 362 257801 - 257786 - g 79 -3.2 -5.32699 | CCAAATATTAAAAAA CGACTG GATA CAACCG GGTATGACTATTAAC arcB 257151 - 258161 + | ornithine cyclodeaminase accC 259559 - 258213 - | biotin carboxylase TERM 363 258336 - 258348 + g 71 -4.9 -4.72272 | opp_overlap 258336 TCCTTCAATCACAAG TTCTT CTA AAGAA TTTTTCATGCGCGCG TERM 364 259330 - 259312 - G 71 -3 -5.00616 | TTTTCCGCCAAAAAA CCATACCC GGG GTGAATGG CCTCAACATCCGTAA TERM 365 259459 - 259447 - G 78 -9.1 -3.78022 | opp_overlap 259447 CGCACATGCATTAAA TCGCG ATC CGCGA TTGAATAAGCCGCTA accB 260084 - 259566 - | biotin carboxyl carrier protein of acetyl-CoA carboxylase TERM 366 260182 - 260148 - R 88 -11.4 -3.62046 | opp_overlap 260148 GTAGGTTTTCAACAA GTAGCCCGTATTTCGC TTC GCTTCATACGGGCTAC TTGTTGAAAACCTAC TERM 367 260148 - 260182 + r 88 -11.4 -3.62046 | opp_overlap 260148 GTAGGTTTTCAACAA GTAGCCCGTATTTCGC TTC GCTTCATACGGGCTAC TTGTTGAAAACCTAC TERM 368 260216 - 260247 + r 93 -10.8 -4.71222 | overlap 260217 260218 TTCAATCGCACCCCT TTCGTCGTCCCCGC CTGA GCGGGAATGACGGG TTTTAGTTTTAGTCT TERM 369 260217 - 260246 + r 86 -12.1 -3.41107 | overlap 260216 260218 TCAATCGCACCCCTT TCGTCGTCCCCGC CTGA GCGGGAATGACGG GTTTTAGTTTTAGTC TERM 370 260218 - 260245 + r 90 -13.4 -2.63579 | overlap 260217 260216 CAATCGCACCCCTTT CGTCGTCCCCGC CTGA GCGGGAATGACG GGTTTTAGTTTTAGT TERM 371 261587 - 261605 + r 83 -6 -5.0538 | overlap 261588 GTGCCGATGTGAATT GCCAATTC GGC GAATTGGG TTTTTTGAAGTCAAC TERM 372 261588 - 261604 + r 79 -9.5 -3.62746 | overlap 261587 TGCCGATGTGAATTG CCAATTC GGC GAATTGG GTTTTTTGAAGTCAA TERM 373 261902 - 261891 - R 70 -5.8 -4.38712 | TTCAGCCGGAGAAAA TCCC CTGT GGGA GGCTTTTAAAATACT dsbD 264767 - 262875 - | thiol:disulfide interchange protein TERM 374 263644 - 263620 - G 100 -9.9 -4.44046 | CCCATCGTAAACAAA GCGACGCCTCC TAA GGACGCGTTGC CCGTATGACTGATAT TERM 375 264697 - 264753 + g 100 -10.8 -4.60889 | gap 1, overlap 264706 264707 264752 AAGTGAACAACTGGT GCCCTCTTTCG-CACGTCATTCCGGCA ACCA TGCCAGAATGACGTGCCTTTTGGGGGC TTTTTCAAGCTCATT TERM 376 264706 - 264743 + g 100 -17.1 -4.14615 | overlap 264697 264707 ACTGGTGCCCTCTTT CGCACGTCATTCCGGCA ACCA TGCCAGAATGACGTGCC TTTTGGGGGCTTTTT TERM 377 264707 - 264742 + g 100 -20.6 -3.07685 | overlap 264706 264697 CTGGTGCCCTCTTTC GCACGTCATTCCGGCA ACCA TGCCAGAATGACGTGC CTTTTGGGGGCTTTT TERM 378 265179 - 265191 + r 72 -3.3 -5.00884 | opp_overlap 265170 265179 ATTCAAGCGGCTAAA CCATC CGC GCTGG TTTTTTCAGAAGAAT TERM 379 267283 - 267265 - R 82 -3.9 -5.48054 | overlap 267266 ATCAAAATCAAAAAA GCAATTT TATTG AAATCGC ATTGAAATGGTGCCA TERM 380 269174 - 269184 + r 75 -2.6 -5.19275 | overlap 269171 269176 GAAATTGGATGATTA TTTA AAA TAAA TTTTATTTTCTAAAT CBUD_0284 269909 - 269199 - | hypothetical protein acnA 272673 - 269920 - | aconitate hydratase TERM 381 270151 - 270137 - G 77 -8.6 -3.96618 | opp_overlap 270137 TCTAATTTTAAAGAA TGACGA TTA TCGTCA TTTTTGAATTCCAAC TERM 382 270137 - 270151 + g 91 -8.6 -4.74103 | opp_overlap 270137 TCTAATTTTAAAGAA TGACGA TTA TCGTCA TTTTTGAATTCCAAC TERM 383 270763 - 270780 + g 71 -8.5 -3.54129 | overlap 270766 TTCTTCGTCTCCCTC GAATACG TCGG CGTATTC TTTGCGGAACATATC TERM 384 270951 - 270939 - G 75 -9.1 -3.69437 | opp_overlap 270949, overlap 270935 CAAGGGCAAAAGCAA CCACC AGC GGTGG TGATGCTAACCAATT groS 272702 - 273085 + | 10 kDa chaperonin GROES TERM 385 273198 - 273227 + G 85 -9.3 -4.20084 | opp_overlap 273198 273201, overlap 273199 CCAACGCGGTAAAAG TGACGTTGGGACC AAAA GGTCGCAATGTCG TTTTAGATAAATCAT TERM 386 273199 - 273226 + G 77 -10.6 -3.11569 | opp_overlap 273198 273201, overlap 273198 CAACGCGGTAAAAGT GACGTTGGGACC AAAA GGTCGCAATGTC GTTTTAGATAAATCA TERM 387 273489 - 273479 - g 77 -8.2 -3.91897 | CGGGGTATTGATAAA GCCG TAA CGGC AGCGGTAGCTGAATT TERM 388 274322 - 274292 - g 80 -2.5 -5.5762 | gap 1, overlap 274294 ATGAAAGAGAAAAAA GC-CCGCGTGGAAG ATGC CTTACATGCGACGC GCGCAGCCGTCGAAG groL 273113 - 274771 + | 60 kDa chaperonin GROEL TERM 389 274825 - 274788 - f 100 -15.7 -3.91897 | opp_overlap 274799 274820, overlap 274799 CCTTGCACTCAGAAA GCAAAAAAAAACCCCGC CTAT GCGGGGTTTTTTGTAGC CCGTATGCAGCGAAG TERM 390 274814 - 274799 - f 100 -11.8 -6.28631 | opp_overlap 274799, overlap 274788 GAAAGCAAAAAAAAA CCCCGC CTAT GCGGGG TTTTTTGTAGCCCGT TERM 391 274799 - 274814 + F 100 -11.8 -5.24531 | opp_overlap 274799 274788 GAAAGCAAAAAAAAA CCCCGC CTAT GCGGGG TTTTTTGTAGCCCGT TERM 392 274840 - 274878 + F 84 -12.6 -3.07816 | opp_overlap 274840, overlap 274820 274866 CCCGTATGCAGCGAA GCGGAATACGGGGA AAATGATTTCA TCCTCGTATTCCGC TTCGCTGCATACGGG TERM 393 274878 - 274840 - f 84 -12.5 -3.07816 | opp_overlap 274820 274840 274866 CCCGTATGCAGCGAA GCGGAATACGGGGAAAA TGATT TCATCCTCGTATTCCGC TTCGCTGCATACGGG TERM 394 275023 - 274998 - g 75 -9.1 -3.69332 | gap 1, opp_overlap 275005 275006 GAAGAACACGCTAAA GCGAAAGCCCAC TTT GTGGA-TTTCGC GGGGTGGGAAATGCC gcvT 274899 - 276050 + | aminomethyltransferase gcvH 276061 - 276453 + | glycine cleavage system H protein gcvPA 276456 - 277796 + | glycine dehydrogenase [decarboxylating] TERM 395 278151 - 278171 + G 75 -3.2 -5.08169 | gap 1, overlap 278152 278152 ACGTCATCCTTTATC TCC-GGCTC CTCA GAGCCAGGC TTTTTTACAATGTCT TERM 396 278684 - 278657 - g 87 -8.3 -4.41241 | overlap 278659 TAAATTTGCATAAAA CCTTCGCCACC CCCCAC GGTGGCGGCGG CCCCGGGGCAGGACC gcvPB 277864 - 279339 + | glycine dehydrogenase [decarboxylating] CBUD_0294 279728 - 279438 - | hypothetical cytosolic protein CBUD_0295 279933 - 279745 - | hypothetical protein CBUD_0296 280529 - 280092 - | hypothetical protein dapB 281251 - 280532 - | dihydrodipicolinate reductase sodB 281834 - 281253 - | superoxide dismutase TERM 397 281837 - 281847 + H 93 -6.8 -5.4387 | ATTCAAAAGCCATTA GGAG TTC CTCC TTTTTTCATTTATCT CBUD_0298a 281921 - 282013 + | hypothetical protein CBUD_0299 282051 - 282653 + | thioredoxin peroxidase TERM 398 282678 - 282700 + F 100 -11.3 -5.52347 | opp_overlap 282671 282678 AAATAAAAGCAGAAA CGGCGATAG AAATA CTGTCGCCG TTTTTTAATTTTGTT TERM 399 282700 - 282678 - f 85 -9.1 -4.27846 | opp_overlap 282678, overlap 282671 AAATAAAAGCAGAAA CGGCGATAG AAATA CTGTCGCCG TTTTTTAATTTTGTT CBUD_0301 282711 - 283100 + | hypothetical protein rnt 283771 - 283097 - | ribonuclease T pyrC 284813 - 283758 - | dihydroorotase TERM 400 284361 - 284351 - G 77 -4.6 -5.06414 | CGCGTTCAATAAAAA CCGC TTC ACGG TCAAAAATATCGACT CBUD_0302a 284893 - 285027 + | hypothetical cytosolic protein CBUD_0303 286508 - 285102 - | hypothetical membrane spanning protein TERM 401 285319 - 285308 - G 78 -4.4 -5.16841 | overlap 285310 285311 TCAGACCAATAAAAA TAGC AGCA GCTA ATCGCGCTGCCGTTC TERM 402 286390 - 286408 + g 73 -5.2 -4.73108 | TAATCAGTTATGATT TGCCATAC CTC GTGAGGCA TTTTAATTTTCTCCC CBUD_0304 286789 - 288345 + | hypothetical protein TERM 403 288407 - 288365 - g 100 -16.6 -4.09739 | opp_overlap 288365 TGAAGGGCCCCAAAA GTACCTGTAATATTGATATG AAT CATAGCAAAATTACAGGTAC TTTTATGCATCACCG TERM 404 288365 - 288407 + G 100 -16.6 -4.42386 | opp_overlap 288365 TGAAGGGCCCCAAAA GTACCTGTAATATTGATATG AAT CATAGCAAAATTACAGGTAC TTTTATGCATCACCG CBUD_0306 288349 - 289608 + | hypothetical ATPase nth 290239 - 289583 - | endonuclease III rnfB 290867 - 290226 - | electron transport complex protein TERM 405 290371 - 290387 + g 91 -3.7 -5.86061 | TGCTCGGCTTTATGG CGGGAAA GTC TTTTCTG TTTTTTTTCATAACG metG 292500 - 290860 - | methionyl-tRNA synthetase TERM 406 291114 - 291124 + g 71 -2.4 -5.09895 | opp_overlap 291114 TAATTTCTTTAGCAA GCGC CCA GGGC TTTTTTGCATCGATA TERM 407 291324 - 291307 - G 79 -8.4 -4.15222 | ATTTTTCGTAATAAA GCCAGC GCACCG GCTGGC GAGATTGACGTATTT TERM 408 291609 - 291594 - G 74 -4 -5.00616 | TTGCCGGCCAAAAAA GTGCAT GGAA ATACAC GATATCTTTTCCGAC TERM 409 291826 - 291846 + g 83 -9.1 -4.1673 | opp_overlap 291825 CCACGGCTTTAAATC CTCAGAGAA CCA TTCTTTGAG TTTATTAGCGACTTG TERM 410 292290 - 292305 + g 74 -4.6 -4.86001 | overlap 292286 292284 TAGCCACCAGCGCTT CGGGGG GAAG CCCTTG TTTTTGTGCGGTGAT TERM 411 292547 - 292564 + H 85 -5.5 -5.18357 | TTTTCATCATTTTGG CAGGGTC TGAA GGCTCTG TTTTTTAATACGTTA TERM 412 294000 - 294016 + G 70 -7.9 -3.724 | TACCATCTACACCCG GCTTCGC TTA GCGATGC TTCTATTCATCCGTT TERM 413 294260 - 294242 - g 71 -4.6 -4.74504 | overlap 294245 ATGTGAATTTAAAAA GAATATTC CCG GAATAATC GAGTACACTGTTGGC CBUD_0309 292653 - 294488 + | hypothetical protein CBUD_0309a 294610 - 294485 - | hypothetical protein CBUD_0310 294683 - 294853 + | hypothetical cytosolic protein TERM 414 295079 - 295065 - g 73 -7.1 -4.08216 | opp_overlap 295065, overlap 295066 GCAGCGGGCGGAAAA GGGAG GCACT CTCCC TCCTTAAAAACGTTA CBUD_0311 294846 - 295172 + | transcriptional regulator CBUD_0311a 295380 - 295279 - | hypothetical protein TERM 415 295502 - 295524 + H 82 -11.4 -3.16683 | opp_overlap 295507 295508, overlap 295508 GGGCTAAAATGCTGA GAAAAGCACC ATC GGTGTTTTTC TTAGTCCCCTAACAT TERM 416 295508 - 295518 + H 85 -6.8 -5.1356 | opp_overlap 295507 295508, overlap 295502 AAATGCTGAGAAAAG CACC ATC GGTG TTTTTCTTAGTCCCC TERM 417 295904 - 295890 - g 89 -7.1 -4.96848 | TGGGGTACAGAAAAA GCCTG AAATG CAGGC AAAGAAATTTGTGCC TERM 418 296132 - 296116 - g 87 -6.5 -5.09225 | overlap 296086 ACGTTAGCGAAAAAA GCCCC TATTGCG GGGGC GGTGATCGTCACTAC apbC 295606 - 296526 + | iron-sulfur cluster assembly/repair protein dcd 296526 - 297092 + | deoxycytidine triphosphate deaminase TERM 419 297248 - 297258 + G 78 -4 -5.1244 | opp_overlap 297248 CTGGGGGTTCTAAAT GAAA AAT TTTC TTTTTCTATTACTAA TERM 420 297811 - 297789 - g 82 -8.6 -4.30719 | opp_overlap 297789 297791, overlap 297791 TTCTGGTACAATAAA CAGAACAATA AGT TATTGTTCTA TTTTTCGCACGATCT TERM 421 297789 - 297811 + G 74 -6.4 -4.57837 | opp_overlap 297789 297791, overlap 297791 TTCTGGTACAATAAA CAGAACAATA AGT TATTGTTCTA TTTTTCGCACGATCT TERM 422 297809 - 297791 - g 78 -9 -3.75817 | opp_overlap 297791 297789, overlap 297789 CTGGTACAATAAACA GAACAATA AGT TATTGTTC TATTTTTCGCACGAT TERM 423 297791 - 297809 + G 78 -9 -3.90316 | opp_overlap 297789 297791, overlap 297789 CTGGTACAATAAACA GAACAATA AGT TATTGTTC TATTTTTCGCACGAT TERM 424 298124 - 298110 - g 71 -8.6 -3.55622 | TCTAACGCCGTTAAA TACCTC GCT GAGGTA GGGAAAATAAAATGT TERM 425 298169 - 298158 - g 73 -5.8 -4.41206 | AACGATGTGATAAAA CGCT TAGG AGCG CAGTCGTGGGTGGGT CBUD_0314 297246 - 299549 + | hypothetical protein TERM 426 299594 - 299561 - T 73 -10.3 -2.79327 | opp_overlap 299554 299564, overlap 299560 299564 TTAGTTTACCTAAAT TGAGTGCGAAAAGGC TTTT GCCCTTTCGCACTTG TTGAGATTTAATTTA TERM 427 299564 - 299591 + T 100 -14.2 -3.71321 | opp_overlap 299564 299561 299560, overlap 299554 GTTTACCTAAATTGA GTGCGAAAAGGC TTTT GCCCTTTCGCAC TTGTTGAGATTTAAT TERM 428 299591 - 299564 - T 100 -16.4 -2.66272 | opp_overlap 299554 299564, overlap 299561 299560 GTTTACCTAAATTGA GTGCGAAAAGGC TTTT GCCCTTTCGCAC TTGTTGAGATTTAAT TERM 429 301271 - 301289 + T 86 -7.4 -5.07011 | opp_overlap 301271 301270 TAGAATTAATTAAAT CGACATCT GTT AGTTGTCG TTTTTCCTTTATGTA CBUD_0319 304455 - 303463 - | transposase CBUD_0319a 304631 - 304539 - | hypothetical protein CBUD_0319b 304801 - 304932 + | hypothetical protein TERM 430 304959 - 304936 - f 71 -9.7 -2.80579 | opp_overlap 304934, overlap 304935 TTGTTAAAATAATAT CCCGTTTTT AATGTA AAAAACGGG CGGTCTTATGACACG TERM 431 305450 - 305430 - g 71 -9.8 -2.57344 | overlap 305429 305433 TACCTTTTCTAGAAG CAATTCGC CAGAT GCGAATTG AGCTTGGCGATCAGC TERM 432 306609 - 306596 - g 77 -3.8 -5.10077 | overlap 306587 306586 AAAGAGGCCAAAAAA GCTG TTTTGG CAGC CCCTTCGCAGGAAAA pyrG 304967 - 306634 + | CTP synthase TERM 433 306709 - 306726 + G 71 -4.9 -4.7416 | gap 1, overlap 306724 TTATGAGAATATTTT CCGC-AAT GTT ATTAGCGG TTTTTGCCGTTTTCC CBUD_0321 306675 - 306971 + | hypothetical protein CBUD_0322 308379 - 306976 - | hypothetical membrane spanning protein TERM 434 307904 - 307925 + g 77 -10.2 -3.14693 | opp_overlap 307902, overlap 307902 TCGTAGGAATAATCC CTACTCCC TAACAC GGGAGTAG TATATTCCTCGTAAC speG 309069 - 308557 - | spermidine N1-acetyltransferase CBUD_0324 309202 - 309636 + | hypothetical cytosolic protein CBUD_0325 309706 - 310791 + | hypothetical cytosolic protein TERM 435 311364 - 311354 - g 91 -5.4 -5.63857 | overlap 311357 AAAAAGTTAAAAAAA CACT CGA AGTG CCGATAATAACCGAC kdsA 311104 - 311946 + | 2-dehydro-3-deoxyphosphooctonate aldolase TERM 436 312615 - 312630 + G 82 -10.4 -3.737 | ATTTATGATTGTCCC GGTCGG TGCG CCGACC TTTGCTGAAGCATTG eno 312103 - 313389 + | enolase ftsB 313396 - 313665 + | cell division protein TERM 437 314075 - 314097 + G 73 -5.4 -4.66833 | overlap 314076 GGTATTCCGGCACGG TCGCCGCTGC GAT GGAGGGGCGG TTTTTGGGATTGCCA surE 313735 - 314511 + | acid phosphatase TERM 438 314840 - 314873 + G 75 -10.2 -2.74286 | overlap 314860 314871 CCGCCGCTGCAGCCC GTCGCCCATTGGCG ATGGCC TGCCAAAGGGCGCC TCATTGGGCATTATT CBUD_0330 314513 - 315205 + | peptidoglycan-specific endopeptidase, M23 family rpoS 315285 - 316343 + | RNA polymerase sigma factor TERM 439 316389 - 316422 + F 88 -8.9 -4.57569 | gap 1 GCGGGCCCAGTAGCT GTAGCCCGTA-TGAGC GAA GCGAAATACGGGCTAC TTTTTGAAAGCCTAC TERM 440 316985 - 316949 - g 86 -11.8 -3.14132 | opp_overlap 316961, overlap 316961 TCGCTGCGCGACGAA TCGCACTCTAAACATG ATGTG CATGTTTATAATGCGA TGCTGGATAGTTTAG CBUD_0332 316541 - 318268 + | hypothetical protein TERM 441 318542 - 318561 + G 70 -3.6 -4.76075 | GATCTCTATTACAGG GTGTCT CCCTCTCT AGACAC TTTTGTTCGTATGAT CBUD_0334 318308 - 320047 + | hypothetical protein CBUD_0333 320637 - 320044 - | CBS domain-containing protein CBUD_0333a 320708 - 320839 + | hypothetical protein TERM 442 320966 - 320954 - g 73 -9.1 -3.55814 | opp_overlap 320954 TACGAAGTGACAGAA GCGGA TCT TCCGC TTTCCTGTCCGATGC TERM 443 320954 - 320966 + G 78 -9.1 -3.83998 | opp_overlap 320954 TACGAAGTGACAGAA GCGGA TCT TCCGC TTTCCTGTCCGATGC CBUD_0335 320900 - 321106 + | hypothetical protein TERM 444 322011 - 322001 - g 80 -4.6 -5.08824 | CCTTTATCCAAAAAA GCCG AGA CAGC AAAATTGGATTTACC rfaF 321110 - 322141 + | ADP-heptose--LPS heptosyltransferase II CBUD_0336 323010 - 322126 - | hypothetical cytosolic protein TERM 445 322209 - 322227 + g 72 -7.4 -3.91421 | opp_overlap 322200, overlap 322207 GCAAAGCCGCTATTT CTAGCGTT GAA AACGCGAG TGTTTTGTATAGTTC TERM 446 322981 - 323002 + g 72 -7.3 -3.96892 | overlap 322972 TCCGAGGCGGCCTGC GCCGATAAT ATTG ATTAGCGGC TTTCTCATGCCGCTT CBUD_0338 324317 - 323007 - | O-antigen ligase TERM 447 323763 - 323751 - G 72 -7.7 -3.75153 | GGTTCTCAACTTAAA GGTAG GCG CTACC GGCGTTAAAGATCGG CBUD_0339 324366 - 325451 + | hypothetical protein TERM 448 325958 - 325938 - g 74 -6.9 -4.25104 | TGTCGTCCACGAAAA TTATCGCTG TCA CAGCAACAA GCCCATGGGTTATTT CBUD_0340 325492 - 326256 + | alpha-L-glycero-D-manno-heptose beta-1,4-glucosyltransferase CBUD_0341 326409 - 326528 + | hypothetical protein TERM 449 327556 - 327568 + G 82 -7.7 -4.52589 | CACCAAATAACCGCT TCCCA TCA TGGGA TTTTATCTGAAAAAG TERM 450 327602 - 327583 - g 81 -7.2 -4.62336 | gap 1, overlap 327584 327586 ATTTTATCTGAAAAA GC-ACTGCT ATT AGCAGTAGC AGATGCCCGCGCTCA hldE 326536 - 328026 + | D-glycero-D-manno-heptose-1-phosphate adenylyltransferase CBUD_0342a 328233 - 328051 - | virulence-associated protein C CBUD_0343 328868 - 328434 - | hypothetical protein TERM 451 328920 - 328941 + r 77 -5.3 -4.93454 | gap 1, opp_overlap 328920, overlap 328920 328915 TCGGTCAACTTAAAA G-AAAAAACC TCG GGTTTTTTAC TTTTCTCTTTATTTC icmX 330080 - 328950 - | IcmX CBUD_0345 330554 - 330096 - | hypothetical membrane associated protein icmW 331000 - 330551 - | IcmW TERM 452 331087 - 331107 + H 76 -3.4 -5.27335 | gap 1, overlap 331087 AATATTAAGGTTCCG TT-AAAGCG CTAC CGCTTTTAA TTTTTATTTAAGAAA icmV 331190 - 331684 + | IcmV TERM 453 332059 - 332069 + G 79 -8.2 -4.21772 | TTGTTAGTGCCTAAC CCGG CGA CCGG TTATTCTTTGTTGCA dotA 331681 - 334125 + | DotA CBUD_0348a 334180 - 334275 + | hypothetical protein TERM 454 334494 - 334447 - T 72 -9.5 -3.09516 | gap 2, opp_overlap 334447 GCCCGTATGAGCGAA GCGAAATACGGGAA-AACA-ATG ATGT CATCTATCGTCCCCGTATTTCGC TTCGCTCATACGGGC TERM 455 334595 - 334606 + T 91 -2.2 -6.15828 | TGAATATTGACAAGG CACT AGTG GGTG TTTTTTTTTAATAAA CBUD_0349 335931 - 334597 - | glycine betaine transporter TERM 456 335289 - 335261 - G 72 -6.1 -4.36914 | TTGCGTTTTATAAAA TTGTTAGTGGTGA GAA TCACCAATAAAAA GAAAAAAATACCGCT TERM 457 335416 - 335396 - G 91 -7.6 -4.86033 | AAAGTCCCAGAAAAA GCAAACAG AGTCG CTGTTCGC GGTAACGCATTTACG TERM 458 335650 - 335634 - G 76 -2.9 -5.252 | GAGCTTCAGAAAAAA GAGGC ATCTTTA GCCCC ACTAAAACACAAATA dotB 337056 - 335938 - | ATP-binding protein dotC 337918 - 337094 - | DotC TERM 459 337491 - 337470 - G 100 -13.7 -3.14522 | overlap 337459 CTAAGCCACAGGTAA CTGCGCCAC GTCG GCGGCGCAG TGACAAACCGCGCAT TERM 460 337700 - 337731 + g 76 -9.4 -3.54919 | gap 1, opp_overlap 337702 GACAGCGCGCCAAGC CAGCGCACCACGCGC GCC GAGCATGGTG-GCTG TTTCACGCAATGCTT dotD 338430 - 337921 - | DotD icmS 338925 - 338587 - | IcmS icmT 339182 - 338925 - | IcmT CBUD_0354a 339357 - 339193 - | hypothetical protein TERM 461 340294 - 340280 - g 76 -7.8 -4.07687 | AGTCTGTGGTTAAAA GCACTC ATT GAGCGC CGCGGAATGAATCGC CBUD_0354b 339527 - 340393 + | transposase CBUD_0356 340662 - 340390 - | hypothetical protein TERM 462 340731 - 340674 - H 73 -9.5 -3.21354 | gap 3 CCATATACGTATGAA GCGAAGCGGAATACGGGAAAACAAT-GA TGTCG TCTATCGTC--CCCGTATTTCGCTTCGC TCATACGGGCTACTG CBUD_0358 340890 - 342086 + | hypothetical protein TERM 463 342784 - 342804 + G 74 -6.1 -4.56597 | overlap 342773 342789 TTAAGAAATACCTTG CTAGAGGGT ATT ACCCTTTCG TTTTTGAAGAGCCGC TERM 464 342789 - 342799 + G 74 -6.8 -4.32046 | overlap 342773 342784 AAATACCTTGCTAGA GGGT ATT ACCC TTTCGTTTTTGAAGA TERM 465 343304 - 343294 - g 75 -2.4 -5.26119 | overlap 343295 GCGGCAAAAATAAAA CGGC CAA GCAG ATTGCCCATCTGGAT CBUD_0359 342198 - 343403 + | ATPase TERM 466 343387 - 343399 + T 70 -7.7 -3.77302 | overlap 343383 TTCCATTGCTATTTC TAGGC TTT GCCTA TTAATTTTCTAGTGG CBUD_0360 343637 - 343500 - | hypothetical protein TERM 467 344452 - 344438 - R 74 -5 -4.67697 | TCTGAAAAGAAGAAA TCTACT CCT AGCAGA TGGAATATGGATCAG CBUD_0361a 345176 - 345003 - | hypothetical protein TERM 468 345067 - 345083 + g 89 -11.5 -3.55444 | TTGTGCGGACCGTAA GCCGCCG GGA TGGCGGC TTTCGAGCGTCCAGG CBUD_0363 345292 - 345441 + | hypothetical protein icmQ 345438 - 346154 + | IcmQ icmP 346155 - 347318 + | IcmP TERM 469 347346 - 347327 - g 73 -2.8 -5.18726 | overlap 347329 GGCTTAGAAGAAAAA CACGAACG CTTC CATTCGCA CGTGCTGCGCGACAC TERM 470 347418 - 347401 - g 71 -3.3 -5.02074 | opp_overlap 347402 347403, overlap 347402 347403 CGATTTTCTAAAAAA TCCGCGA GGCA TCGCGAC TTTTCTTTTGTTATT TERM 471 348796 - 348813 + G 70 -5.5 -4.56367 | opp_overlap 348796 TATGAAACTTGAAGA TCCAACG GAAA CGTGGGA TTTCTTTATGAAATC icmO 347294 - 349672 + | IcmO icmN 349682 - 350320 + | IcmN protein, OmpA family icmL2 350327 - 350950 + | IcmL TERM 472 351011 - 351033 + G 78 -5.6 -4.90079 | opp_overlap 351014 351017, overlap 351017 TGCGTTTTATCGCGA TAATTATCGC CGA GCGATTATTG TTTTATTGTTCGCAT TERM 473 351017 - 351027 + G 74 -6.8 -4.33214 | opp_overlap 351017 351014, overlap 351011 TTATCGCGATAATTA TCGC CGA GCGA TTATTGTTTTATTGT icmL1 350952 - 351608 + | IcmL TERM 474 352455 - 352443 - g 82 -10.5 -3.59627 | overlap 352434 ATTAAACGTTTTAAA CGGCG TTC CGCCG AGTAACAGCAAACCC TERM 475 352533 - 352543 + G 74 -6.8 -4.40358 | CATTTTTTTACGGAC CCGT TTA ACGG TTTTATCGCCTGGAT icmK 351619 - 352674 + | IcmK TERM 476 352727 - 352749 + G 100 -12.6 -3.73953 | opp_overlap 352726 352725 AAATTCCGAGTAATT GCCGCCGCGG TTG CCGCTGTGGC TTTAATCGCGGTGGT TERM 477 353585 - 353608 + G 75 -8.8 -3.72695 | gap 1, opp_overlap 353573 353572 GATGCCGGTTTTACG GCCGCGCAGCT AAA AGCGGCG-GGC TTTAGTGCGAAAGAT TERM 478 353726 - 353691 - g 75 -5.4 -4.80396 | overlap 353692 CAAAAGATTTAAAAA GCGCTGGCTTTAGTGC AGTG GCATTAAAACAAGCGG GATTTAGCAATGCGG TERM 479 353725 - 353692 - g 73 -8.9 -3.46611 | overlap 353691 AAAAGATTTAAAAAG CGCTGGCTTTAGTGC AGTG GCATTAAAACAAGCG GGATTTAGCAATGCG TERM 480 353913 - 353894 - g 74 -7.8 -4.07568 | gap 1, opp_overlap 353879 353877, overlap 353895 TTGGCGGCTTTAAAA GCGGCCGGC TTT ACCG-CCGC CGAACTTAAAGACGC TERM 481 353970 - 353991 + G 75 -5.1 -4.82901 | gap 1, opp_overlap 353954, overlap 353964 353970 GGGCCGGATTCAGCG CC-GCCGATT TAA AAGCGGCCGG TTTTTCTGCGGCGCA TERM 482 354165 - 354181 + G 72 -9.3 -3.23447 | overlap 354164 ATCAGGCTTTGAGCG CAGCGGG ATT CCCGCCG TCTTCTGGCGATTGC TERM 483 354221 - 354206 - g 75 -9 -3.57462 | GATTGCAGCGTCAAA GCGCTT AAAA AAGCGC GAATGGCGGGTATTT TERM 484 354298 - 354260 - g 82 -3.1 -5.54338 | gap 2, overlap 354261 354287 GAATTAAAAGAAAAA GGTTGTGGGCTGGCTGCTT TAA AAGCAGCCGGCTT-C-ACC GCAGCCGAGCTTAAA TERM 485 354599 - 354586 - g 75 -5.9 -4.7078 | overlap 354578 354587 TGAAGCACTGAAAAA CGCCG GTTT CAGCG CCGCGCAACTCAAAG TERM 486 355151 - 355136 - g 73 -8.2 -3.61398 | GTGGCCTTGCAACAA CCGGCG ACTA CACCGG TAGGGGGCAACGTTA icmE 352661 - 355780 + | IcmE TERM 487 355835 - 355820 - g 73 -5.4 -4.67635 | overlap 355821 TCGAAAATCAGAAAA CCATCG GCGA CGATGA ATACCAATATCCTAA icmG 355798 - 356532 + | IcmG icmC 356603 - 357112 + | IcmC icmD 357206 - 357622 + | IcmD TERM 488 357694 - 357724 + G 100 -19.2 -3.57462 | opp_overlap 357703, overlap 357703 TTGGCGATTATTCAT GGTAAGAAAGGCTG ATA CAGCCTTTCTTGCC TTTCAAGCTAAAGTG TERM 489 357703 - 357715 + G 86 -9.1 -4.29326 | opp_overlap 357703, overlap 357694 ATTCATGGTAAGAAA GGCTG ATA CAGCC TTTCTTGCCTTTCAA TERM 490 357715 - 357703 - g 83 -9.1 -4.18488 | opp_overlap 357703 357694 ATTCATGGTAAGAAA GGCTG ATA CAGCC TTTCTTGCCTTTCAA TERM 491 358102 - 358112 + G 74 -6.8 -4.2828 | AAGCCATCCGGCTTT GCTG GGA CAGC TTTTAGTGGATACAA TERM 492 358151 - 358140 - g 85 -4.4 -5.51046 | CAAAGACAGAAAAAA TGAG TTTG CTCA AAGACGCATTGGAAA icmJ 357635 - 358273 + | IcmJ TERM 493 358463 - 358446 - g 74 -7.7 -4.05714 | opp_overlap 358446 358444 ATTGTGAATTACAAA CAGCCGA TAGT TCGACTG TGTTAGTTGCTCACG TERM 494 358935 - 358954 + G 81 -9.4 -3.794 | ATCACGACTCTTTTG TTCGTTCA GTAG TGAACGAA TTTAATGGGTTGGGG TERM 495 359702 - 359721 + G 72 -9.2 -3.08446 | overlap 359702 CTCTTTCGCCCCGCC TCGCCGTG GACG CACGGCGC ATTATTATTTCGTTC TERM 496 359702 - 359722 + G 76 -7.6 -4.16787 | gap 1, overlap 359702 CTCTTTCGCCCCGCC T-CGCCGTG GACG CACGGCGCA TTATTATTTCGTTCT icmB 358346 - 361357 + | IcmB CBUD_0377 361509 - 361372 - | hypothetical protein CBUD_0378 362398 - 361727 - | hypothetical protein TERM 497 362011 - 361986 - GR 71 -4.1 -4.85599 | gap 1, opp_overlap 361993 361997, overlap 361992 361993 TTCATCTCAGAAAAA TTGAAATCGAGC TTT GCTCG-TTTAAA GGGCGGAGATTGGTT TERM 498 361993 - 362005 + gr 74 -9.1 -3.53012 | opp_overlap 361993 361992 361986, overlap 361997 CAGAAAAATTGAAAT CGAGC TTT GCTCG TTTAAAGGGCGGAGA CBUD_0378a 362682 - 362329 - | hypothetical protein CBUD_0378b 362810 - 362944 + | hypothetical protein TERM 499 364154 - 364143 - g 71 -4.4 -4.75174 | GAGGTAAGTCAAAAA GCTA TTAA TAGC CTTAAAAGTGACATG CBUD_0379 362973 - 364190 + | hypothetical protein TERM 500 364353 - 364367 + TF 70 -5.7 -4.34402 | opp_overlap 364353 AAAAGAATTTATGAA GCTTG TTTTC CAAGC TTTTCATCTAAAAAA CBUD_0381 365088 - 364828 - | hypothetical protein CBUD_0381a 364760 - 364915 + | hypothetical protein TERM 501 366498 - 366475 - g 88 -6.8 -5.13527 | gap 1 AATCAATAAACAAAA TGAAG-GAGGT CAA ACCCCGCTTCA CGATGCCACAGATAG TERM 502 367416 - 367400 - g 76 -9.5 -3.54475 | overlap 367409 GCGCTTATCAGACAA CTATCAG AAG CTGATAG CCAGCTTAAAACGAT CBUD_0382 365297 - 367972 + | ankyrin repeat protein TERM 503 368128 - 368147 + F 75 -10 -3.17392 | opp_overlap 368128 TATAATTCCTCAAAA CCCTGTCC GTTA GGATAGGG TTAACTTACGCGATG TERM 504 368147 - 368128 - f 75 -7.8 -4.12198 | opp_overlap 368128 TATAATTCCTCAAAA CCCTGTCC GTTA GGATAGGG TTAACTTACGCGATG TERM 505 368177 - 368200 + F 95 -13.2 -3.72576 | opp_overlap 368176 368175 GGGGGATTCCAAAGG GGGGGAGAAC CACG GTTCTCCCTC TTTGCTCGCCGAGCG TERM 506 368287 - 368248 - f 88 -11.6 -3.57901 | opp_overlap 368256 368259, overlap 368250 368256 GCGATTAAAAACAGA GATAAAAATAGCACGGGC GTAA GCCCGTGGTATTTCTATT AAAAAATAAGGCGAA TERM 507 368285 - 368250 - f 100 -14.2 -3.35531 | opp_overlap 368256 368259, overlap 368248 368256 GATTAAAAACAGAGA TAAAAATAGCACGGGC GTAA GCCCGTGGTATTTCTA TTAAAAAATAAGGCG TERM 508 368279 - 368256 - f 93 -11 -5.1104 | opp_overlap 368256 368259, overlap 368250 368248 AAACAGAGATAAAAA TAGCACGGGC GTAA GCCCGTGGTA TTTCTATTAAAAAAT TERM 509 368256 - 368279 + F 90 -11 -4.19177 | opp_overlap 368256 368250 368248, overlap 368259 AAACAGAGATAAAAA TAGCACGGGC GTAA GCCCGTGGTA TTTCTATTAAAAAAT TERM 510 368259 - 368276 + F 83 -12.7 -2.81182 | opp_overlap 368256 368250 368248, overlap 368256 CAGAGATAAAAATAG CACGGGC GTAA GCCCGTG GTATTTCTATTAAAA CBUD_0383 368308 - 368706 + | hypothetical protein CBUD_0384 371364 - 369106 - | mechanosensitive ion channel TERM 511 369293 - 369279 - G 100 -8.6 -4.87133 | ATCCTTTAAACAAAA CCAATG GTG CATTGG GGCCTTCTTGAATAA TERM 512 370182 - 370170 - G 85 -4.1 -5.42259 | TTAGCGTTAAAAAAA TTCCC AAA AGGAA AAATAACGCTAAACG CBUD_0385 372385 - 371357 - | succinylglutamate desuccinylase/Aspartoacylase family protein TERM 513 371406 - 371416 + g 71 -2.4 -5.16472 | TGTAAATAATTAATG GGCG ACT CTCC TTTTTTCGCCTTTTT rimK 373293 - 372388 - | ribosomal protein S6 modification protein CBUD_0387 373775 - 373290 - | hypothetical protein TERM 514 373523 - 373539 + g 77 -3.7 -5.09245 | CATAGATATCCGCTT CACAG GTAATCA CTGTG TTTTTGTCCTTTTGA CBUD_0389 374133 - 374678 + | heat resistant agglutinin rpoD 379346 - 377250 - | RNA polymerase sigma factor TERM 515 378362 - 378374 + g 71 -3.3 -5.0538 | CTTTTTGATGTTTGA GCGTT GCC GGCGC TTTTTTGCCATAACG dnaG 381184 - 379466 - | DNA primase TERM 516 379944 - 379933 - G 86 -5.8 -5.27923 | GAAGTTGATAAAAAA TGCC TCTT GGCA TCGGCCGTAAATGTT TERM 517 380931 - 380913 - G 75 -3 -5.16237 | overlap 380918 AAGGCCATTAAAAAA CTAATGGC GTT GCCGTGAG CAGCGCATCCAAAAC TERM 518 381205 - 381149 - G 100 -16.2 -3.14931 | gap 1, opp_overlap 381149 381154, overlap 381154 381188 381189 CGTAGCCCGTATGAA GCGAAGCGGAATACGGGA-ATTAAA AGCTTCAA TCAAATACCCCGTATTCCGCTTCGC TTCATACGGACTACG TERM 519 381149 - 381205 + g 86 -11.8 -3.14931 | gap 1, opp_overlap 381149 381154 381188 381189, overlap 381154 CGTAGCCCGTATGAA GCGAAGCGGAATAC-GGGAATTAAA AGCTTCAA TCAAATACCCCGTATTCCGCTTCGC TTCATACGGACTACG CBUD_0395 381674 - 381225 - | GatB/Yqey domain protein TERM 520 381532 - 381556 + g 74 -7.8 -3.99957 | TTCATGACGCCAGCG TCGTCGAGCG TGATT TGCTCGTCGA TTTCTCGCTGTTTGA rpsU 381962 - 381702 - | SSU ribosomal protein S21P TERM 521 381888 - 381874 - G 76 -7.8 -4.07885 | opp_overlap 381865, overlap 381875 CACGCTCGCTTAAAA CGTCGC ATA GCGACA TCGAAAGCGTTATTG nhaP.1 383432 - 382179 - | Na+/H+ antiporter TERM 522 382562 - 382582 + g 76 -2.5 -5.35224 | overlap 382559 382559 382563 CGTCGATGACTTCCC AGAAAGTCT CTA GGGCTTTCG TTTTCTTTTTATGCG TERM 523 383541 - 383554 + G 76 -9.5 -3.50532 | overlap 383537 TCATCATCATCATTG CGCCC GATT GGGCG TTACTTCATTTGGGT CBUD_0399 383521 - 383829 + | hypothetical membrane associated protein TERM 524 383854 - 383874 + F 90 -12.6 -3.54307 | opp_overlap 383850, overlap 383872 AAATAGCAATAGTTT GAGGGGGA TTAAC TCCCCCTC TTTCGCGAGAGTATT TERM 525 384039 - 384056 + G 74 -4.1 -4.96657 | overlap 384025 384034 ACCTAGACTCGGCTG GGGTTTA GCCT TAATCCC TTTTCTTCTCTTTAT TERM 526 384145 - 384155 + G 73 -2.6 -5.15526 | CGTTGGTTCCCCGAC TTAA ATA TTAA TTTTTCATTTTATGT TERM 527 384326 - 384349 + G 74 -4 -5.055 | TGGGATTGGTTTTAG CAAATAAC TTAATTGT GTTATTTG TTTTTTGGGAATTAA TERM 528 384392 - 384438 + G 80 -8.8 -4.07133 | gap 3 CTTTTTTGCTTATTG GTCTTGAGCACGAGCGGCCTGCC GCGC GGAAGGCCGC-CGTG--CAAGCC TTGTTTGTCACGGTG TERM 529 385086 - 385100 + G 88 -9.2 -4.35017 | CGCTAGCGCTTCGAT GGCGGG GCT TCCGCC TTTATTAGGTTTTTA TERM 530 385207 - 385217 + G 75 -3.2 -5.17488 | TCTAACATGATCATG GCTA TGC TGGC TTTTCTTTTGGTATT shaA 383950 - 386256 + | sodium/proton antiporter protein shaB 386253 - 386660 + | sodium/proton antiporter protein mrpC 386657 - 387028 + | hypothetical protein TERM 531 388367 - 388344 - g 72 -7.4 -3.92369 | opp_overlap 388366 ATCTAAAAAAGAAGA TCACGCGTTG CTTT CAACGGGCGA AAAATTTTCTTTATT shaD 387025 - 388524 + | sodium/proton antiporter protein shaE 388521 - 388868 + | sodium/proton antiporter protein mrpF 388865 - 389167 + | hypothetical protein shaG 389160 - 389540 + | sodium/proton antiporter protein CBUD_0406a 389703 - 389581 - | hypothetical protein TERM 532 389834 - 389872 + r 86 -11.8 -3.28416 | opp_overlap 389836, overlap 389835 389848 GGGAATCCAGGCTAA AAGGCTAAGAAAAGCGCC GTT GGTGTTTTTCTTAGCCCC TTAATCTGGATCCTC TERM 533 389835 - 389871 + r 95 -15.3 -2.56728 | opp_overlap 389836, overlap 389834 389848 GGAATCCAGGCTAAA AGGCTAAGAAAAGCGCC GTT GGTGTTTTTCTTAGCCC CTTAATCTGGATCCT TERM 534 389870 - 389836 - R 100 -14.4 -4.15453 | opp_overlap 389835 389834 389848 GAATCCAGGCTAAAA GGCTAAGAAAAGCGCC GTT GGTGTTTTTCTTAGCC CCTTAATCTGGATCC TERM 535 389848 - 389858 + r 76 -4.6 -5.06816 | opp_overlap 389836, overlap 389835 389834 AAAGGCTAAGAAAAG CGCC GTT GGTG TTTTTCTTAGCCCCT CBUD_0407 391292 - 390114 - | ATPase wrbA 391801 - 391208 - | trp repressor binding protein TERM 536 392421 - 392440 + G 78 -4.2 -5.10033 | GGACCTTATTGGATG GCCCTATT TGGG AAAGGGGC TTTTATTTGTCTTGC CBUD_0409 391912 - 392748 + | ribonuclease BN TERM 537 393051 - 393063 + G 79 -6.9 -4.67697 | ATTGTCATTAATTTG GCTGC TAT GCGGC TTTATTATTTTCCCA CBUD_0411 392751 - 393695 + | hypothetical protein CBUD_0410 396180 - 393661 - | hypothetical membrane spanning protein TERM 538 395917 - 395933 + g 84 -3.7 -5.52384 | CGATGTGGAAGGCCG GGGTT CTTCGTT AACCC TTTTTTTAGTAGGAG tolR 396766 - 396323 - | TolR tolQ 397457 - 396744 - | TolQ CBUD_0414 398768 - 397533 - | transporter, MFS superfamily TERM 539 399877 - 399863 - R 75 -7.8 -4.07687 | AGTCTGTGGTTAAAA GCACTC ATT GAGCGC CGCGGAATGAATCGC CBUD_0416 400245 - 399973 - | hypothetical protein TERM 540 400314 - 400257 - R 73 -9.5 -3.21354 | gap 3 CCATATACGTATGAA GCGAAGCGGAATACGGGAAAACAAT-GA TGTCG TCTATCGTC--CCCGTATTTCGCTTCGC TCATACGGGCTACTC ruvB 401387 - 400332 - | holliday junction DNA helicase TERM 541 400722 - 400761 + g 70 -5.7 -4.2828 | gap 1, overlap 400708 ACGATTGGCGATACG CGGTGTGCCGCGAGATCG GCGGG CGATTTCACC-CGCACCG TTTTCATCAATAACG CBUD_0419 403140 - 401497 - | hypothetical cytosolic protein TERM 542 401736 - 401748 + g 75 -3.3 -5.24551 | AACTTTTATTCTCGA GAGGC GTA GGCTC TTTTTCTTCCTTTCC TERM 543 402301 - 402340 + g 91 -5.1 -5.72254 | overlap 402302 GATTTCGATAAACTC GGCAATTTTAAGTTCGG CTAAGC CCGAATTTAATGTTGCA TTTTTTATTCTTTCC TERM 544 402302 - 402339 + g 77 -8.6 -4.00912 | overlap 402301 ATTTCGATAAACTCG GCAATTTTAAGTTCGG CTAAGC CCGAATTTAATGTTGC ATTTTTTATTCTTTC ruvA 403842 - 403240 - | holliday junction DNA helicase ruvC 404357 - 403839 - | crossover junction endodeoxyribonuclease TERM 545 403918 - 403943 + g 77 -4.5 -5.01535 | opp_overlap 403905 AACGCAATCGCTAAG GCGTCCGCGGC GTCT GCCGGTGGTGC TTTTTCTAATTGTAA TERM 546 404384 - 404433 + r 100 -14.3 -3.34947 | gap 1 AAGCCTGCCGTGCTT TCCAACCCGTAGCCCGTATTTCGC TTC GCTTCATACGGGCTACGGGC-GGA TTATAACACTTCTTC CBUD_0422 405168 - 404434 - | hypothetical cytosolic protein aspS 407016 - 405184 - | aspartyl-tRNA synthetase CBUD_0425 410443 - 409655 - | hypothetical membrane spanning protein TERM 547 409884 - 409901 + g 71 -4.1 -4.83615 | gap 1, opp_overlap 409864 409883 409884 AAAGAAGCGATCAAT CCGT-CCC ACG GGGTATGG TTTTTATCAACGATC CBUD_0425a 410651 - 410526 - | hypothetical protein CBUD_0425b 410792 - 410700 - | hypothetical protein CBUD_0427 411590 - 410961 - | hypothetical membrane spanning protein TERM 548 411042 - 411056 + g 74 -4.2 -5.03314 | TTCGATCGTGACCGG GAGGTC AAT GACATC TTTTTTGGGGGTGAC TERM 549 411093 - 411082 - G 70 -3.6 -4.81212 | GTGACCATAAGAAAA CCCG AGGT CGGA TTAGGAGTGGTGGGC TERM 550 411609 - 411619 + r 73 -2.4 -5.1848 | CTTTCTTGGTTTTTC GTGG TGA CCTC TTTTTTAGGTTCCTT CBUD_0428 411862 - 411587 - | hypothetical protein TERM 551 412036 - 412018 - R 75 -10.2 -3.05816 | overlap 411986 GCAGGCGGGAGTCAA GGCGCGCT TTT AGCGCGCA GCGCACATAGTGCGC CBUD_0430 413792 - 412089 - | hypothetical membrane spanning protein TERM 552 413385 - 413373 - G 78 -4.1 -5.14626 | opp_overlap 413373, overlap 413368 ATCATTAAAATAAAA CCAAA TTT CTTGG TTTTGGTTAACTTCC TERM 553 413609 - 413598 - G 78 -4.4 -5.1848 | AATTAATTTAAAAAA TTCC ATAA GGAA AAATGTGTTACTAAA CBUD_0433 415244 - 415516 + | hypothetical protein TERM 554 415612 - 415626 + T 75 -7.8 -4.07687 | GCGATTCATTCCGCG GCGCTC AAT GAGTGC TTTTAACCACAGACT TERM 555 416677 - 416645 - T 100 -26.5 -3.53012 | TTTTGTCCGGTTAAA TACCCATCAGGCCGC AAG GCGGCCTGATGGGTA ACGTGAGTGAGAGTA CBUD_0435 417917 - 416712 - | ribonucleoside-diphosphate reductase beta chain TERM 556 416759 - 416775 + g 84 -3.7 -5.42198 | opp_overlap 416769, overlap 416737 416762 416769 GGTATTCAATGACGC GGGTTTC AAA GAAATTC TTTTCTTTTTTGAGA TERM 557 416762 - 416772 + g 71 -4 -4.75934 | opp_overlap 416769, overlap 416759 416769 ATTCAATGACGCGGG TTTC AAA GAAA TTCTTTTCTTTTTTG TERM 558 416769 - 416780 + g 71 -3 -5.05782 | opp_overlap 416769, overlap 416762 416759 GACGCGGGTTTCAAA GAAA TTCT TTTC TTTTTTGAGATCCAT TERM 559 417806 - 417816 + g 71 -3.2 -5.00884 | CGGTTTCCTCCTCAT CGGA TTT TTCG TTTTTTGGGGAGAAT CBUD_0436 420792 - 417967 - | ribonucleoside-diphosphate reductase alpha chain TERM 560 419382 - 419394 + g 73 -9.1 -3.53855 | overlap 419381 TATCGTGGGTGCGGC GGCGA TCA TCGCC TGTATTTTTACGCAA TERM 561 419703 - 419690 - G 71 -3.1 -5.00884 | ACTGTCGTTAAAAAA CAACT GGAA AGCTG CGGAAAAACGGTGCC CBUD_0436a 420915 - 420814 - | hypothetical protein TERM 562 421068 - 421050 - g 73 -10.2 -2.52543 | opp_overlap 421062 ACGCGTGGGAATTTA GGCGCGCT TTT AGCGCGCT GCGCACTTAGTGCGC CBUD_0436b 420968 - 421078 + | hypothetical protein TERM 563 421228 - 421210 - f 72 -10.2 -2.52896 | opp_overlap 421216 421217 GCAGGCGGGAATCCA GGCGCACC TTC GGTGCGCT GCGCACGTGTGCGCG TERM 564 421596 - 421618 + F 75 -10.4 -2.98823 | opp_overlap 421593 GCCTAAAAAATTTCG CCGCCCCGAG CAT CGCGGGCCGG TATGTATCGGACAGC TERM 565 422830 - 422818 - g 77 -6.3 -4.63928 | AGAGTATCCTAAAAA CACTA TTT TAGTG AGTGAAGAAGTGACT TERM 566 422961 - 422981 + G 73 -5.3 -4.62069 | overlap 422962 GGTTGCCGGCCGTGA TGGGTGTTC GCG GTACACCCC TTTTTAAACTGGGCG TERM 567 422962 - 422980 + G 71 -8.8 -3.3692 | overlap 422961 GTTGCCGGCCGTGAT GGGTGTTC GCG GTACACCC CTTTTTAAACTGGGC ptsP 421799 - 424099 + | phosphoenolpyruvate-protein phosphotransferase TERM 568 424787 - 424804 + G 86 -7 -5.00616 | overlap 424780 424779 TTATGTTACGGATTA TTCCGC TTTACT GCGGAA TTTTTTCGACAACCG TERM 569 424877 - 424899 + G 100 -10.6 -4.33151 | overlap 424880 GGGCAAGAATTATCA CTGCCGATGA TTA TCATCGGTGG TTTTGCCTTATGGTG TERM 570 424880 - 424896 + G 79 -10.9 -3.14977 | overlap 424877 CAAGAATTATCACTG CCGATGA TTA TCATCGG TGGTTTTGCCTTATG lgt 424154 - 424939 + | prolipoprotein diacylglyceryl transferase TERM 571 425148 - 425158 + GF 71 -3.2 -4.93547 | overlap 425145 GTCGCTGGTTTTGTT GTAG CAA CTGC TTTTTGGTTAATTAA CBUD_0441 424941 - 425315 + | hypothetical membrane spanning protein thyA 425216 - 426106 + | thymidylate synthase CBUD_0443 426860 - 426141 - | hypothetical protein TERM 572 426878 - 426894 + H 86 -2.4 -5.9663 | overlap 426878 TTATTACCTCTTTTT TAAATA ATTTA TATTTA TTTTTTTTGATATTT TERM 573 427053 - 427005 - H 100 -20.5 -3.1505 | opp_overlap 426995 426992 427010 427016, overlap 426992 427010 AGTAGCCCGTATGAA GCGAAGCGGAATACGGGGTAT TGTTATT ATTCCCCGTATTTCGCTTCGC TCATACGGGCTACCT TERM 574 427048 - 427010 - H 83 -11.8 -3.20723 | opp_overlap 426995 426992 427010 427016, overlap 426992 427005 CCCGTATGAAGCGAA GCGGAATACGGGGTAT TGTTATT ATTCCCCGTATTTCGC TTCGCTCATACGGGC TERM 575 427010 - 427048 + H 93 -14 -3.09516 | opp_overlap 426992 427005 427010, overlap 426995 426992 427016 CCCGTATGAAGCGAA GCGGAATACGGGGTAT TGTTATT ATTCCCCGTATTTCGC TTCGCTCATACGGGC CBUD_0444 427164 - 427757 + | hypothetical protein CBUD_0445 428006 - 427863 - | hypothetical protein TERM 576 427898 - 427910 + g 71 -3.4 -5.02716 | AAGCGTCGGCTGGTG GAAG CGGGC CTTC TTTTAATTTTTTTTT CBUD_0446 428051 - 428380 + | hypothetical membrane associated protein CBUD_0446a 428513 - 428415 - | hypothetical protein TERM 577 428475 - 428459 - G 79 -11.5 -2.52896 | opp_overlap 428440 428447 GCAGGCGGGAATCCA GCGCGCC TTT AGCGCGC AGCGCACTCAGAAAA CBUD_0446b 428876 - 428547 - | hypothetical protein CBUD_0448 430183 - 428903 - | tyrosine-specific transport protein TERM 578 429678 - 429657 - G 70 -7.3 -3.83026 | gap 1 TTCGTTGACATCAAA CCGCGG-TTG ACC CAATCCACGG CGCGCACCCCATAAA CBUD_0449 431577 - 430207 - | carboxy-terminal processing protease precursor TERM 579 431346 - 431371 + g 71 -4.2 -4.82667 | gap 1 TGCCGCTAATTGCGC TGTCGAGTAAT TTTTT ATTACTC-ACA TTTTTAATGTAATAC CBUD_0450 432815 - 431574 - | non-proteolytic protein, peptidase family M23 TERM 580 432068 - 432078 + g 75 -3.2 -5.13016 | CGGCTAATAATTCAG CCAG CCG TTGG TTTTTCGTTTTAATT TERM 581 432814 - 432799 - G 90 -4 -5.70522 | overlap 432800 AATAATAATAAAAAA CGCAAA ATCC TTTGCA TAAGTTATTTCAGCG gpmI 434378 - 432819 - | phosphoglycerate mutase TERM 582 436339 - 436363 + G 71 -2.1 -5.17353 | overlap 436341 GAAACCTAAACGGTG TGTTGGTAATG AAT CATTGCCGGGA TTTTTTCGTCACTCT CBUD_0453 434531 - 436480 + | hypothetical protein CBUD_0454 437814 - 436483 - | hypothetical membrane spanning protein TERM 583 437996 - 438045 + H 100 -18.7 -3.1505 | opp_overlap 437996 438009 AGTAGCCCGTATGAA GCGCAGCGAAATACGGGGAATTG CCTT TATTTCCCGGCATTTCGCTGCGC TTCATACGGGCTACT TERM 584 438045 - 437996 - H 100 -20.2 -3.1505 | opp_overlap 437996, overlap 438009 AGTAGCCCGTATGAA GCGCAGCGAAATACGGGGAATT GCCTTT ATTTCCCGGCATTTCGCTGCGC TTCATACGGGCTACT TERM 585 438287 - 438311 + H 85 -7.2 -4.99645 | GGAGAAGGAGAACCC CGATTAACAG AGTCG CAGTTAATCG TTTTATTTCTGAGCT TERM 586 439525 - 439515 - H 72 -4.6 -4.83032 | overlap 439501 ACACGAAATACAAAA CGCA TTG CGCG AGGGGAGGAATAATA TERM 587 440770 - 440756 - g 80 -10 -3.59315 | GGAATCAGCCGCAAA TGCCGT GGG ACGGCA CCGAGCTTTGGATGG TERM 588 441818 - 441808 - g 71 -3.2 -5.07486 | overlap 441809 TATCCTGAACAAAAA TCGC TTT ACGA TGCGCGCTCGCCAAT CBUD_0459 440176 - 442086 + | prolyl oligopeptidase family protein TERM 589 442199 - 442215 + T 83 -10.8 -3.64703 | CGTGGACGCCCGAGA GCCGCC GTCCG GGCGGC TTTCGGTCCGCACAA CBUD_0460 443641 - 442259 - | hypothetical protein TERM 590 442365 - 442347 - G 75 -8.8 -3.62476 | TAATTAACCAGATAA TCGCCTAG CGG CAAGGCGA GTAAGCGATTGCAGG TERM 591 442376 - 442402 + g 76 -9.4 -3.50569 | overlap 442374 GGCGAGTAAGCGATT GCAGGTGGTGTA AGG TGTGCCGCCTGC TGGTTTTTTTGCAGT TERM 592 442949 - 442972 + g 78 -5.4 -4.92314 | gap 1, overlap 442938 TTCTCCAATGAGATT TGGTTTTGCTT GAT AAGC-GAACCA TTTTTGTCGATTGAT TERM 593 443769 - 443733 - g 100 -17.3 -4.70659 | overlap 443736 TTTGAGATTTAAAAA GCACGTCGTCCCGCG GCTTGAG CGCGGGACGACGCTC CCAAAATTAGAATTG TERM 594 443766 - 443736 - g 100 -19.8 -3.27476 | overlap 443733 GAGATTTAAAAAGCA CGTCGTCCCGCG GCTTGAG CGCGGGACGACG CTCCCAAAATTAGAA CBUD_0460a 443713 - 443808 + | hypothetical protein TERM 595 446217 - 446229 + G 71 -4.9 -4.65182 | ATATGATTTCCATAT TTCTT AAA AAGAA TTTGTTTGGTTTATG CBUD_0461 443861 - 446893 + | hypothetical membrane associated protein TERM 596 446902 - 446874 - T 100 -12.6 -4.1711 | opp_overlap 446874 446878, overlap 446878 ACGACCCGGAAGAAA CAAAGCGCCTTA CGATT TAAGACGCTTTG TTTCCCTGCTTGCGG TERM 597 446874 - 446902 + T 80 -10.4 -3.71527 | opp_overlap 446874 446878, overlap 446878 ACGACCCGGAAGAAA CAAAGCGCCTTA CGATT TAAGACGCTTTG TTTCCCTGCTTGCGG TERM 598 446898 - 446878 - T 83 -7.6 -4.67607 | opp_overlap 446874 446878, overlap 446874 CCCGGAAGAAACAAA GCGCCTTA CGATT TAAGACGC TTTGTTTCCCTGCTT TERM 599 446878 - 446898 + T 70 -5.4 -4.47786 | opp_overlap 446878 446874, overlap 446874 CCCGGAAGAAACAAA GCGCCTTA CGATT TAAGACGC TTTGTTTCCCTGCTT CBUD_0462 447942 - 446947 - | hypothetical protein CBUD_0463 448326 - 448760 + | rhodanese-related sulfurtransferase grxC 448765 - 449022 + | glutaredoxin TERM 600 449326 - 449316 - g 81 -4 -5.31275 | overlap 449317 TTTCACCATAAAAAA CTTT CCT AAAG AGGAAATGCGACCGA secB 449035 - 449520 + | protein translocase subunit TERM 601 450308 - 450291 - g 72 -7.7 -3.90744 | TTTGGCGGTAAACAA GAAACCC TCAC GGGTCTC GCTGGCTTAGGGGAT TERM 602 450413 - 450438 + G 90 -11.1 -4.00038 | opp_overlap 450413 AAAAGAAGCTCAACA GGCCATCGGTC AAGC GATCGAAGGCC TTTATAATACTGATC gpsA 449589 - 450587 + | glycerol-3-phosphate dehydrogenase [NAD(P)+] CBUD_0467 451073 - 450615 - | 23S rRNA methyltransferase CBUD_0468 451614 - 451078 - | hypothetical protein CBUD_0468a 451996 - 451778 - | hypothetical protein CBUD_0470 452764 - 452000 - | hypothetical protein TERM 603 453052 - 453038 - g 71 -4.2 -4.86731 | overlap 453040 453047 GCTGTGGAAAGAAAA CTGCAA GAA TTGCCG ACTGAGTGGCAACCG TERM 604 453353 - 453333 - g 85 -7.5 -4.81083 | GTGAAGGATTAAAAA TGGATGTCC ACG GGACGCCCA TTCGCGTAAGTTCAG CBUD_0471 452813 - 453589 + | short chain dehydrogenase CBUD_0473 453593 - 454306 + | rhodanese-related sulfurtransferase CBUD_0472 455088 - 454303 - | ZIP family zinc transporter TERM 605 454944 - 454933 - G 75 -7.2 -4.27211 | GGGAAATAAATGAAA GGCG GCTG CGCC TAAAAAAATGCCATC TERM 606 454963 - 454953 - G 89 -6.8 -5.40072 | CTGCGCCTAAAAAAA TGCC ATC GGCA AAAGCGTCACCTAAC accA 455237 - 456187 + | acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha tilS 456163 - 457512 + | tRNA(Ile)-lysidine synthetase CBUD_0476 457590 - 459221 + | hypothetical ATPase TERM 607 459527 - 459517 - gf 81 -5.4 -5.09895 | opp_overlap 459517 GATTTACTTAAAAAA GCAA TTT TTGC TGCTGTCGTTGGTTT CBUD_0477 459244 - 461472 + | copper-exporting ATPase CBUD_0478 461423 - 461926 + | thioesterase lepA 462062 - 463906 + | GTP-binding protein lepB2 463903 - 464673 + | signal peptidase I rnc 464694 - 465395 + | ribonuclease III TERM 608 465629 - 465639 + G 71 -8.2 -3.53811 | opp_overlap 465622 TACATGAATCGTACC GCGC GCG GCGC TTTAAGAGACGTCGA era 465392 - 466279 + | GTP-binding protein recO 466276 - 466971 + | DNA repair protein TERM 609 467002 - 467036 + F 100 -15.8 -4.33165 | opp_overlap 467002 467029 TTCGTGAAAGAAAAA GTAGCCCGTATGTAGC GAA GCGAAATACGGGCTAC TTTTGGTCGATTTAG TERM 610 467036 - 467002 - f 100 -15.8 -5.27335 | opp_overlap 467002, overlap 467029 TTCGTGAAAGAAAAA GTAGCCCGTATGTAGC GAA GCGAAATACGGGCTAC TTTTGGTCGATTTAG TERM 611 467274 - 467264 - f 73 -5.4 -4.58283 | opp_overlap 467252 467249 467264, overlap 467252 GAATTGCTTGAAAAA GCAA TCC TTGC TTTGCGCCGGTTAGC TERM 612 468091 - 468101 + F 85 -6.8 -5.03314 | opp_overlap 468090 CACGCACTAAGTGAT CTCG ATG CGAG TTTTTTCAGAGTGCG CBUD_0486 468345 - 468476 + | hypothetical protein TERM 613 468742 - 468762 + G 73 -8.3 -3.73775 | opp_overlap 468742 468741 GGGTTTTGTTAAAAT TTCCCAAGG TAA CCTTGCGAA TTTACTGAACGTCGC TERM 614 469485 - 469505 + G 71 -3.4 -4.99043 | gap 1, opp_overlap 469484, overlap 469484 GTTATGGTTATACAT CTTC-TCTT TCAG AAGAAGAAG TTTTATTTCTAAAGA TERM 615 470325 - 470311 - g 74 -4.9 -4.80853 | overlap 470312 AGTTGAAAAAAATAA CCCGC ATTTA GCGGA AGCGCTTGCCAAAAA TERM 616 470769 - 470737 - g 75 -7.1 -4.27192 | opp_overlap 470746, overlap 470740 AAAGGCTTATGAAAA TAATCATACTGTCGT TAG ACGACATTATGAACA GTTAGTGTCTCATTT TERM 617 470766 - 470740 - g 100 -11 -4.25256 | opp_overlap 470746, overlap 470737 GGCTTATGAAAATAA TCATACTGTCGT TAG ACGACATTATGA ACAGTTAGTGTCTCA CBUD_0487 468473 - 470842 + | hypothetical protein pdxJ 470890 - 471645 + | pyridoxal phosphate biosynthetic protein CBUD_0489 473492 - 471819 - | hypothetical protein TERM 618 473661 - 473614 - H 100 -7.1 -5.69262 | gap 3, opp_overlap 473621 473623 473624, overlap 473615 473618 CGACAAAAATAAAAA TGCACATTTCCGTCGTCCCGCGGC TTG ACCGCGGGACGACG---ATGTTCT ATTGTGTCACGTACG TERM 619 473660 - 473615 - H 88 -10.6 -3.99117 | gap 3, opp_overlap 473621 473623 473624, overlap 473614 473618 GACAAAAATAAAAAT GCACATTTCCGTCGTCCCGCGGC TTG ACCGCGGGACGACG---ATGTTC TATTGTGTCACGTAC TERM 620 473657 - 473618 - H 78 -10.9 -2.9976 | gap 3, opp_overlap 473621 473623 473624, overlap 473615 473614 AAAAATAAAAATGCA CATTTCCGTCGTCCCGCGGC TTG ACCGCGGGACGACG---ATG TTCTATTGTGTCACG TERM 621 473621 - 473657 + H 100 -15.8 -3.79874 | opp_overlap 473618 473615 473614, overlap 473623 473624 AATAAAAATGCACAT TTCCGTCGTCCCGCGG CTTGA CCGCGGGACGACGATG TTCTATTGTGTCACG TERM 622 473623 - 473655 + H 100 -20.6 -3.47975 | opp_overlap 473618 473615 473614, overlap 473621 473624 TAAAAATGCACATTT CCGTCGTCCCGCGG CTTGA CCGCGGGACGACGA TGTTCTATTGTGTCA TERM 623 473624 - 473654 + H 100 -24.1 -2.68062 | opp_overlap 473618 473615 473614, overlap 473623 473621 AAAAATGCACATTTC CGTCGTCCCGCGG CTTGA CCGCGGGACGACG ATGTTCTATTGTGTC TERM 624 475026 - 475044 + G 74 -10.2 -2.66316 | opp_overlap 475038 475039, overlap 475024 GCGCACACCGTGCGC AGCGCGCT AAA AGCGCGCC TGGTCTCCTGCGCGG CBUD_0491 474822 - 475091 + | hypothetical protein TERM 625 475262 - 475319 + F 73 -9.5 -3.21354 | gap 3, opp_overlap 475252 475262 AGTAACCCGTATGAA GCGAAGCGAAATACGGG--GACGATAGA CGACA TC-ATTGTTTTCCCGTATTCCGCTTCGC TTCATACGTATATGG CBUD_0493 475331 - 475603 + | hypothetical protein CBUD_0493a 476466 - 475600 - | transposase TERM 626 475699 - 475713 + g 76 -7.8 -4.07687 | GCGATTCATTCCGCG GCGCTC AAT GAGTGC TTTTAACCACAGACT CBUD_0493b 477345 - 477491 + | hypothetical protein CBUD_0496 479411 - 477564 - | tetratricopeptide repeat family protein CBUD_0497 479596 - 480756 + | hypothetical ATPase CBUD_0498 481025 - 480879 - | hypothetical protein TERM 627 481352 - 481333 - g 88 -3.4 -5.81412 | opp_overlap 481333 481338 GCCACCGAAAAAAAA CGAGGGGA AGAA TCGCCGCG ATTTTTTCTTACCTC CBUD_0499 481123 - 481434 + | hypothetical protein TERM 628 481487 - 481468 - T 78 -2.8 -5.47218 | opp_overlap 481468 GGTCATGGAAAAAAA GGGCAATA AACG CATTGTCC TATGTTGTGATTCCC TERM 629 482918 - 482934 + T 70 -3.5 -4.83759 | opp_overlap 482911 TTTCAAAAGTTGTTC CCAACGC TGC GCGAGGG TTTTTAAATTTGATT CBUD_0504 485324 - 485160 - | hypothetical protein TERM 630 485341 - 485295 - G 86 -11.9 -3.09516 | opp_overlap 485295 485301, overlap 485301 GCGCGTATGAGCGAA GCGAAATACGGGGA-CAATAGAC GAC ATC-ATTGTTTCCCGTATTTCGC TTCGCTCATACGGGC TERM 631 485295 - 485341 + g 100 -13.4 -3.09516 | opp_overlap 485295 485301, overlap 485301 GCGCGTATGAGCGAA GCGAAATACGGG-GACAATAGA CGACA TC-ATTGTTTCCCGTATTTCGC TTCGCTCATACGGGC TERM 632 485492 - 485548 + r 73 -7.9 -3.82117 | opp_overlap 485495 485509, overlap 485495 AGAGGACAGAGGACT GAAGACAGAAGACTGAATGTTGTCGCG AAG CGACACAACTATCTGCCTTCTGTCCTC TGTTTTCTGAATGGG TERM 633 485545 - 485495 - R 75 -10.4 -3.12606 | opp_overlap 485492 485495, overlap 485509 GGACAGAGGACTGAA GACAGAAGACTGAATGTTGTCGCG AAG CGACACAACTATCTGCCTTCTGTC CTCTGTTTTCTGAAT CBUD_0507 485867 - 485670 - | hypothetical protein TERM 634 485724 - 485744 + g 100 -14.1 -4.59773 | GCGGGCGTTCGGCGG GAGCAAAGC TGT GCTTTGCTC TTTTTCCGCCTCACC TERM 635 485834 - 485810 - G 100 -9.9 -5.89827 | AAGTACCAAAAAAAA GCCCCGGAATC ATC GACCCTGGGGC ACAGAAGATAGCTGA hup 486154 - 485870 - | DNA-binding protein HU TERM 636 486703 - 486677 - g 80 -11.6 -2.64155 | opp_overlap 486668, overlap 486674 486673 TGTTCGTGAAAGTTA TCCGGATCTGAC GGC GCTAGATCCGGA AGATCATCATTATGA CBUD_0509 486459 - 486917 + | hypothetical protein tldD 488672 - 487239 - | microcin-processing peptidase 2 (TldD) CBUD_0512 492204 - 488743 - | hypothetical protein TERM 637 488871 - 488843 - G 71 -9.5 -3.01712 | GCCGCTTTGCCAACA TGGGGGGCCAGTA TTT TATCGGCCACCCA GGCGATTACGCCGGC TERM 638 490236 - 490216 - G 80 -6.1 -4.90778 | GTTATTTAAAGAAAA TTGGCCGTC CTT AACGGCTAA CTGGCCTTCGGCTCT TERM 639 492101 - 492077 - G 81 -4.2 -5.41143 | opp_overlap 492061 CAGTGCTCAAAAAAA TCGCGCTGGT GGTTG AGCAGCGGGA CGGTCATACGAACAC mreD 492692 - 492204 - | rod shape-determining protein mreC 493576 - 492698 - | rod shape-determining protein TERM 640 493458 - 493444 - G 70 -7.8 -3.61089 | opp_overlap 493443 493444 493455, overlap 493455 GGGGAAGAACCACAA GGGCTA AAT CAGCCC GTATTTTCTGGAAAA TERM 641 493604 - 493620 + r 73 -6.6 -4.17048 | ACCAGCGGGAGCTCA GAATGC GTCAA GCATTC TTCTTTTGAAGACAG mreB 494717 - 493659 - | rod shape-determining protein TERM 642 495057 - 495081 + r 75 -7.9 -4.07568 | opp_overlap 495057 495060, overlap 495060 AGTTGGCCGGATAAA TAACCCCTCTT AAA AGGAAGGGTTA TTTTAAAAACCAGCG TERM 643 495081 - 495057 - R 73 -7.9 -3.85817 | opp_overlap 495057 495060, overlap 495060 AGTTGGCCGGATAAA TAACCCCTCTT AAA AGGAAGGGTTA TTTTAAAAACCAGCG CBUD_0516 495517 - 495107 - | hypothetical protein TERM 644 495369 - 495382 + g 86 -3.1 -5.71712 | ACCGTTATCCAGGGA CTGTG AGTG TACAG TTTTTTTATGTAAGG CBUD_0516a 495712 - 495912 + | hypothetical protein TERM 645 496320 - 496298 - g 74 -4 -5.05782 | overlap 496278 ACTTATTTCAAAAAA GCGCACCCCA AGT TGAAGCGGGC CTTTATATGGTTCCT gatC 496060 - 496359 + | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C gatA 496363 - 497814 + | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A TERM 646 498739 - 498725 - g 87 -8.6 -4.56597 | CTCCCTTGGGAAAAA CGCAAA CGC TTTGCG GCTAGTTATCAATTA gatB 497819 - 499252 + | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B TERM 647 499318 - 499332 + T 73 -10 -2.76265 | overlap 499317 AGAGGACAGTGGTTG TGTGGC TTC GCCACA ATTAATTTATAAAAT oxyR 500359 - 499424 - | hydrogen peroxide-inducible genes activator TERM 648 500168 - 500152 - G 85 -9.3 -4.17048 | opp_overlap 500151 500149 500148 CTTCTTGCAAAATAA CGCGGAC TTG GGCCGCG ATAATTTGACCGATC ahpC 500487 - 501026 + | peroxiredoxin TERM 649 501050 - 501099 + G 100 -21.1 -3.14931 | opp_overlap 501050 501055 501061, overlap 501055 501061 AGTAGCCCGTATGAA GCGAAGCGAAATACGGGAA CGACATCATAAT TTCCCGTATTTCGCTTCGC TTCATACGGGCTACG TERM 650 501099 - 501050 - g 100 -21.1 -3.1505 | opp_overlap 501050 501055 501061, overlap 501055 501061 AGTAGCCCGTATGAA GCGAAGCGAAATACGGGAA CGACATCATAAT TTCCCGTATTTCGCTTCGC TTCATACGGGCTACG TERM 651 501094 - 501055 - g 93 -12.4 -3.20723 | opp_overlap 501050 501055 501061, overlap 501050 501061 CCCGTATGAAGCGAA GCGAAATACGGGAA CGACATCATAAT TTCCCGTATTTCGC TTCGCTTCATACGGG TERM 652 501055 - 501094 + G 93 -12.4 -3.20723 | opp_overlap 501055 501050 501061, overlap 501050 501061 CCCGTATGAAGCGAA GCGAAATACGGGAA CGACATCATAAT TTCCCGTATTTCGC TTCGCTTCATACGGG ahpD 501045 - 501662 + | peroxiredoxin reductase (NAD(P)H) TERM 653 501664 - 501687 + T 93 -11 -4.69464 | opp_overlap 501662 501660 501658 501665, overlap 501665 AGAATAAAACATAGC AGGTTGAGCC GACA GGCTCAACCC TTTTTAAAGTCTTTT TERM 654 501686 - 501665 - T 93 -14.5 -2.89379 | opp_overlap 501664 501665, overlap 501662 501660 501658 GAATAAAACATAGCA GGTTGAGCC GACA GGCTCAACC CTTTTTAAAGTCTTT TERM 655 501665 - 501686 + T 100 -14.5 -3.40051 | opp_overlap 501665 501662 501660 501658, overlap 501664 GAATAAAACATAGCA GGTTGAGCC GACA GGCTCAACC CTTTTTAAAGTCTTT CBUD_0523 502143 - 501691 - | hypothetical protein TERM 656 501904 - 501875 - GT 76 -9.3 -3.53189 | opp_overlap 501874 501898 501902 AACTGAATATGATAA TTCACTGTCGCCC CCGA AGACGGCAGTGAA AATGATTTTCCTTGT CBUD_0524 502760 - 502107 - | hypothetical protein TERM 657 502192 - 502178 - GR 100 -4.2 -5.98781 | opp_overlap 502178 TAGAATGAAAAAAAA GCGTTA GAT TGACGC TTTTGATAGCTTCCC TERM 658 502178 - 502192 + gr 72 -6.4 -4.30978 | opp_overlap 502178 TAGAATGAAAAAAAA GCGTTA GAT TGACGC TTTTGATAGCTTCCC CBUD_0525 503110 - 502757 - | hypothetical protein TERM 659 503186 - 503200 + r 73 -10 -2.76265 | overlap 503185 AGAGGACAGTGTTCG TGTGGC TTC GCCACA ATTAATTTATAAAAT CBUD_0526 504073 - 503324 - | membrane protease family, stomatin/prohibitin homolog CBUD_0527 505449 - 504073 - | non-proteolytic membrane spanning protein, peptidase family S49 TERM 660 504451 - 504433 - G 72 -9.6 -3.1855 | GCCGCCAATACCCAA CATGCCAA AAC TCGGCATG AAAGCTTCCGCAACA TERM 661 504968 - 504984 + g 73 -3.6 -5.01676 | GCGGTTTTTTGCGCC GGTGCT TTTTT AGCTCC TTCTTTTTTTTCGTT TERM 662 506015 - 506029 + G 71 -7 -4.09243 | overlap 506016 CGCTGTTATCGGCTC AGCGCC CGT GGCGCA TTTTGCAAACCTGTA TERM 663 506016 - 506028 + G 76 -10.5 -3.05224 | overlap 506015 GCTGTTATCGGCTCA GCGCC CGT GGCGC ATTTTGCAAACCTGT TERM 664 506358 - 506377 + G 95 -7.8 -5.17576 | gap 1 TCTCTAATCTGGCTT GGCATCGCC GTC GGCGG-GCC TTTTTTCGGTTGGTG CBUD_0529 505539 - 506825 + | transporter, MFS superfamily CBUD_0528 507499 - 506822 - | cyclin protein TERM 665 506923 - 506909 - G 100 -4.2 -5.9362 | GAAAAGAGAAAAAAA CGATAG ATT CGATCG CCTTGCCTCCACTAA CBUD_0528a 507628 - 507524 - | hypothetical protein TERM 666 507698 - 507716 + r 72 -10.2 -2.71731 | AGCGCACCTGTGCGC AGCGCACC GAA GGTGCGCC TAGTTCCCGCCTGCG cysS 509201 - 507819 - | cysteinyl-tRNA synthetase TERM 667 507900 - 507914 + g 80 -3.5 -5.40072 | ATCGCGAATTTGATC GGCTG TTTTC CAGTC TTTTTTTGCGCGAGC TERM 668 508382 - 508399 + g 93 -4.1 -5.80003 | opp_overlap 508381 508382 GAATAGAAATAATAT TGCCCAA CGAT TTGGACA TTTTTTCTTTATTAA TERM 669 508574 - 508556 - G 77 -11 -2.78032 | opp_overlap 508556, overlap 508555 508553 GTTGGCCCAAAATAC TGCTCGAC ATC GCCGAGCA TTCAATATGCCAGCC TERM 670 508928 - 508948 + g 85 -7.5 -4.8743 | ATATCTGAATAAACC GCTCGGC TAATGCT GCCGGGC TTTCTTTATTTTCCC gltX1 510589 - 509192 - | glutamyl-tRNA synthetase TERM 671 510567 - 510555 - G 72 -7.7 -3.82097 | CCCAAATGCATCAAA CCAGT AGG ACTGG GACAGAAACGGCTTT lpxH 510746 - 511477 + | UDP-2,3-diacylglucosamine hydrolase higA 511858 - 511547 - | virulence-associated protein I CBUD_0534 512202 - 511864 - | AAA family ATPase TERM 672 512254 - 512266 + H 72 -10.5 -2.53876 | TGAATTTGCCTACCA CGGCC GTA GGCCG TAGGTTGGGCTGAGC TERM 673 512284 - 512303 + H 73 -5.7 -4.52042 | overlap 512269 GGTTGGGCTGAGCTT GCGAAGC CCAACA GTTTCGC TTTCTTCCTTTTTGT TERM 674 516800 - 516816 + H 100 -3.7 -6.15828 | overlap 516802 AGGAAGCAGGCAGTC TTCAGAA ACG TTCTGTA TTTTTTTTTGCTGGC TERM 675 516802 - 516814 + H 80 -6.3 -4.72643 | overlap 516800 GAAGCAGGCAGTCTT CAGAA ACG TTCTG TATTTTTTTTTGCTG TERM 676 518378 - 518392 + H 72 -3.5 -5.03747 | opp_overlap 518377 AAAAAACTATTGAAG GTCGT GATCG ACGGC TTTTTTGCCCCCTTT CBUD_0540 519648 - 521216 + | peptidyl-prolyl cis-trans isomerase TERM 677 521813 - 521792 - f 89 -10.1 -4.25056 | opp_overlap 521794, overlap 521794 GATTGTACTAATAAA GAGGACCGC TTTT GCGGTCCTT TTTTTTCTCACTTTA TERM 678 521811 - 521794 - f 90 -12.7 -3.72374 | opp_overlap 521794, overlap 521792 TTGTACTAATAAAGA GGACCGC TTTT GCGGTCC TTTTTTTTCTCACTT TERM 679 521794 - 521811 + F 100 -12.7 -5.97575 | opp_overlap 521794 521792 TTGTACTAATAAAGA GGACCGC TTTT GCGGTCC TTTTTTTTCTCACTT TERM 680 522619 - 522605 - g 71 -2.1 -5.09426 | TGGAACCGGAAAAAA TGCAA CGCCT TCGCA AGCAGAAGAAGTGCA tpiA 522021 - 522836 + | triosephosphate isomerase secG 522818 - 523114 + | protein translocase subunit nuoA 523405 - 523767 + | NADH-quinone oxidoreductase chain A nuoB 523772 - 524257 + | NADH-quinone oxidoreductase chain B TERM 681 524303 - 524283 - gf 74 -4.7 -4.85782 | overlap 524285 524302 TGGCTGAAAAACAAA CCTTGATAG ATG CCATCAACG ACCGCTTTAATTCAC nuoC 524267 - 524950 + | NADH-quinone oxidoreductase chain C TERM 682 525407 - 525417 + GF 71 -8.2 -3.56594 | overlap 525408 CGCGACTTATTATCG CCCC GGT GGGG TTTACCGCGATTTGC nuoD 524922 - 526196 + | NADH-quinone oxidoreductase chain D TERM 683 526295 - 526305 + G 71 -4.6 -4.67968 | opp_overlap 526270, overlap 526293 526292 CAAAAACGGTCAGCG GTCG TAC CGGC TTTATTATTTGTTCA nuoE 526196 - 526720 + | NADH-quinone oxidoreductase chain E nuoF 526710 - 527978 + | NADH-quinone oxidoreductase chain F TERM 684 528340 - 528323 - g 100 -9.1 -5.64006 | opp_overlap 528334 ACGCAATCAAAAAAA GCACTGG AAGC CCAGCGC GCCGTGATGGAATTT TERM 685 528533 - 528549 + G 71 -10.1 -2.71791 | overlap 528532 528547 ACTCGCTGTATCCAG TGCACGC GTT GCGTGCG GTTTGGGGAAGAAAT nuoG 528089 - 530452 + | NADH-quinone oxidoreductase chain G nuoH 530452 - 531474 + | NADH-quinone oxidoreductase chain H nuoI 531456 - 531962 + | NADH-quinone oxidoreductase chain I nuoJ 531976 - 532581 + | NADH-quinone oxidoreductase chain J nuoK 532578 - 532883 + | NADH-quinone oxidoreductase chain K TERM 686 533097 - 533121 + G 80 -6.4 -4.83169 | CGATTGCGGTTTTCA TGTTGGTCGC AGTCC GCGGCGAACA TTTTTATGGAACGAT TERM 687 533953 - 533963 + G 81 -5.4 -5.09521 | overlap 533944 TGGCGCTTCGGCTTA TTCC GCC GGAA TTTTTCATTTATTAA TERM 688 534136 - 534151 + G 71 -4.6 -4.63486 | ATCCTTAGCCGCGAT TCCGCC CTTT GCCGGA TTTTATTCCAAAGAT nuoL 532940 - 534901 + | NADH-quinone oxidoreductase chain L TERM 689 536207 - 536238 + G 82 -6 -5.06451 | gap 1, overlap 536210 536211 TACGTTAGTGATTGG CGCTGCTTATACGTT GTG GATGTATAAGC-GTG TTTTTTACGGTCCTG TERM 690 536210 - 536236 + G 73 -7.4 -4.15748 | overlap 536207 536211 GTTAGTGATTGGCGC TGCTTATACGTT GTG GATGTATAAGCG TGTTTTTTACGGTCC nuoM 534906 - 536426 + | NADH-quinone oxidoreductase chain M TERM 691 537644 - 537661 + G 75 -8.5 -3.84825 | AGTCGGCGTTCTTGA TGCACTT ATCC AAGTGCA TTTAGTGTGGCTCGC nuoN 536436 - 537884 + | NADH-quinone oxidoreductase chain N TERM 692 538240 - 538252 + F 100 -6.2 -6.04324 | TCGGGTTTAAGAGTG GGGC TATGT GCCC TTTTTTGTTTTTTGA CBUD_0561 538277 - 538738 + | hypothetical cytosolic protein TERM 693 538923 - 538902 - gf 71 -2.3 -5.1675 | gap 1 CTATCGATCAAAAAA CGGGA-GATT ACG AATCCTTCCG GTGCTGGACTGTCGT nusA 538742 - 540253 + | N utilization substance protein A TERM 694 540464 - 540442 - gf 91 -6.4 -5.51046 | GAAACAGATAAAAAA CGTTCCAAAA TAG TTTTAAAACG AAAAAAACTCAGCGT TERM 695 540574 - 540559 - gf 72 -3.2 -5.06414 | GTTGTCGAACAAAAA CGGG AAACCGAA CCCG CTCCAACGCAAGAAG TERM 696 540761 - 540727 - gf 78 -2.2 -5.49809 | gap 1 GAAACCCCAAAAAAA GGTCCGCGCAAA-GA GACTCG TCGTTCACGCAAACC GGATAAAGAGGACAA TERM 697 540899 - 540913 + GF 84 -11.4 -3.16564 | opp_overlap 540886 540887 AAGGCTTTGCGCGAC CCACCG CAC CGGTGG TTCGTGAAGTCGCGC TERM 698 542438 - 542423 - gf 77 -6 -4.56597 | opp_overlap 542423, overlap 542424 TTCGTTCTTCAAAAA TCGGCG CAAT CGCCGG TTGCATGGTGGTAGA TERM 699 542437 - 542424 - gf 75 -9.5 -3.33744 | opp_overlap 542423, overlap 542423 TCGTTCTTCAAAAAT CGGCG CAAT CGCCG GTTGCATGGTGGTAG infB 540220 - 542670 + | bacterial protein translation initiation factor 2 (IF-2) rbfA 542758 - 543117 + | ribosome-binding factor A TERM 700 543277 - 543295 + G 73 -6 -4.53707 | ACTCTTGCCGATTTG TTTAGGCG AAG CGACTAAA TTTTCTCAATTTCTT truB 543095 - 544024 + | tRNA pseudouridine synthase B CBUD_0565a 544370 - 544029 - | hypothetical protein TERM 701 544512 - 544484 - H 91 -13.1 -2.93073 | opp_overlap 544495, overlap 544481 GGTTTTCAACAAGTA GCCCGTATGCCGC GAA GCGGAATACGGGA AAACAATGATGTCGT CBUD_0567 544564 - 544836 + | hypothetical protein CBUD_0567a 545699 - 544833 - | transposase TERM 702 544932 - 544946 + g 76 -7.8 -4.07687 | GCGATTCATTCCGCG GCGCTC AAT GAGTGC TTTTAACCACAGACT CBUD_0567b 545869 - 546108 + | hypothetical protein CBUD_0568 546749 - 546204 - | hypothetical membrane spanning protein TERM 703 546380 - 546370 - G 73 -5.4 -4.61633 | ATATATGTGGAAAAA TCGA CTT TCGA GGTTTCAAAGGTATG TERM 704 546421 - 546407 - G 85 -5.6 -5.15167 | overlap 546411 TATGACCAATAAAAA GCAAGG CGC CCCCGC CGATTAATAAAACTA TERM 705 546422 - 546411 - G 72 -7.2 -3.94974 | overlap 546407 ACCAATAAAAAGCAA GGCG CCCC CGCC GATTAATAAAACTAA CBUD_0568a 546966 - 546871 - | hypothetical protein TERM 706 548226 - 548205 - g 73 -5.3 -4.63486 | opp_overlap 548200 548198 548205 ATCTTTTTAAGAAAA TTAATTCTC TTAA GAAAATTAA TTCTCTGGTTTTTGT TERM 707 549150 - 549170 + G 77 -4.7 -4.91459 | AGCCTAATCGTTTGC TTTCTATCG ATA CGGCAGAAA TTTTTATCGGTATTG TERM 708 550524 - 550542 + G 81 -7.4 -4.60797 | overlap 550516 GAAATTTCATCGCGC TAGCCCGC GCA GTGGGTTA TTTTATCTATCACGG TERM 709 551537 - 551521 - g 70 -3.7 -4.85599 | opp_overlap 551510, overlap 551510 551522 551525 GGCATTGGACAAAAA TCAATTG GTC CAATTGG TGGGACCCACTGGCG TERM 710 552028 - 552014 - g 70 -7.8 -3.65426 | CGAGAAAGTTGTAAA GTCGCC GAA GACGAC CGATCTAAACCATCC CBUD_0570 546983 - 552826 + | hypothetical protein CBUD_0571 552940 - 552827 - | hypothetical protein CBUD_0572 552925 - 553377 + | 17 kDa common-antigen TERM 711 554088 - 554101 + G 72 -9.5 -3.14878 | opp_overlap 554087 554088, overlap 554087 ACTTATCAGATGAAT CCGGC GAAT GCCGG TATTGCCTTACGCGA hemB 553359 - 554399 + | delta-aminolevulinic acid dehydratase TERM 712 554498 - 554483 - T 81 -11.8 -2.52896 | opp_overlap 554465 554464 GCAGGGGGGAATCCA GCGCGC TTTA GCGCGC AGCGCACGGTGTGCG CBUD_0574 554692 - 554549 - | hypothetical protein TERM 713 554642 - 554683 + g 82 -8.3 -4.2461 | gap 1, overlap 554643 AAGAATAAGACTATC TTTGTTGACCGTTTTAAGTT GAC AACTTAAAATGGTCG-CAGG TTTATTCATCGCGAT TERM 714 554643 - 554682 + g 72 -9.6 -3.14284 | gap 1, overlap 554642 AGAATAAGACTATCT TTGTTGACCGTTTTAAGTT GAC AACTTAAAATGGTCG-CAG GTTTATTCATCGCGA TERM 715 554910 - 554895 - g 74 -4 -5.00616 | gap 1, overlap 554897 554899 GTGGCGGTTAAAAAA TC-CACG CAT CGTGCGA GCGGCTTTGCGGGCG TERM 716 555642 - 555628 - g 78 -9.2 -3.72893 | overlap 555629 TATCGCGCTATGAAA CGCCGG TTT CCGGCA GCGTGGTTACCGTAA TERM 717 555641 - 555629 - g 75 -10.5 -2.83522 | overlap 555628 ATCGCGCTATGAAAC GCCGG TTT CCGGC AGCGTGGTTACCGTA radA 554772 - 556127 + | DNA repair protein TERM 718 556174 - 556212 + T 70 -3 -5.06816 | opp_overlap 556150 556176, overlap 556155 556176 556179 AATACAGGATTATAT TAGTTTCCCGTATTTCGC TTC GCTACATACGGGCTACTC TTTTTCTTAGAGAGT CBUD_0576 557097 - 556219 - | hypothetical protein TERM 719 556439 - 556451 + g 81 -4.1 -5.33921 | GGCAAATGGGCTGTG GTTGT TTC GCAAC TTTTTTCCTTCGTTT TERM 720 558421 - 558411 - g 77 -8.2 -3.91984 | opp_overlap 558411 ATATCGGGCAAAGAA GCCG AAG CGGC TTTAGGACGAGCTAA TERM 721 558411 - 558421 + G 71 -8.2 -3.53444 | opp_overlap 558411 ATATCGGGCAAAGAA GCCG AAG CGGC TTTAGGACGAGCTAA TERM 722 558468 - 558455 - g 71 -2.3 -5.12068 | TACAGTTAACAAAAA TACCG TTCC CGGTG AAACCCGCTCGCCTT TERM 723 558620 - 558606 - g 74 -4.2 -4.93968 | overlap 558608 ATTCATAACGAAAAA GTCATC GCC GATGTC AAACAAAAAGCCCAT glyA 557418 - 558677 + | serine hydroxymethyltransferase nrdR 558677 - 559150 + | putative regulatory protein nusB 559017 - 559556 + | N utilization substance protein B TERM 724 559650 - 559675 + T 87 -8.3 -4.56597 | opp_overlap 559651, overlap 559651 GCTGCGTTATCGAAA ATTATCGGCCG GTTA TGGCCGATAAG TTTTTAACGGAGAAA TERM 725 559674 - 559651 - T 90 -11.1 -4.18018 | opp_overlap 559650 559651 CTGCGTTATCGAAAA TTATCGGCC GGTTAT GGCCGATAA GTTTTTAACGGAGAA TERM 726 559651 - 559674 + T 86 -11.8 -3.33744 | opp_overlap 559651, overlap 559650 CTGCGTTATCGAAAA TTATCGGCCG GTTA TGGCCGATAA GTTTTTAACGGAGAA CBUD_0580 560395 - 559679 - | repressor protein C2 TERM 727 560815 - 560803 - g 80 -4.9 -5.12617 | TAACCATTCAAAAAA CAAAT GAG ATTTG GCTGAAAGCGTTTGC TERM 728 561190 - 561175 - g 86 -6.8 -5.03314 | CGGACCTTGAAAAAA TGGCCC GAGC GAGCCA AGTGGGTGCGAAAAT TERM 729 561277 - 561264 - g 80 -3.8 -5.40072 | TGCCCTCTAAAAAAA GCGT GGGAAT ACGC GCTGACCAGTGGAGA thiL 560520 - 561482 + | thiamine-monophosphate kinase CBUD_0582 561574 - 562365 + | hypothetical protein CBUD_0583 562409 - 563188 + | hypothetical exported membrane spanning protein TERM 730 563796 - 563816 + G 73 -7.5 -4.17048 | opp_overlap 563796 CTCAGCAACATCAAA CGCACCATG GTT TATGGGGCG TTGTTTTAGGGGCGG CBUD_0584 563210 - 564031 + | hypothetical protein CBUD_0584a 564245 - 564075 - | hypothetical protein TERM 731 564234 - 564256 + g 100 -9.2 -4.84602 | TAGGCATCGTTCTTG TCTCTGGC ACAAGCA GCCAGAGA TTTCTTTCTTTATCT gltA 565575 - 564283 - | citrate synthase TERM 732 564499 - 564488 - G 71 -2.2 -5.09204 | AGACCGGAATAAAAA TCCA CATT CGGA TAAAGTTTTTTCTCA TERM 733 565185 - 565157 - G 76 -9.5 -3.44991 | overlap 565155 565158 TAGAAAGCTGAAAGA GCGCCGATGGTGC TAA GCACCATCGCCAT AGGATGCGCGTCATA TERM 734 565184 - 565158 - G 91 -13 -2.66271 | overlap 565157 565155 AGAAAGCTGAAAGAG CGCCGATGGTGC TAA GCACCATCGCCA TAGGATGCGCGTCAT TERM 735 565382 - 565409 + g 78 -5.6 -4.8622 | opp_overlap 565383, overlap 565383 CCCCGATACAGCAAA ATACCTTTCTCG CCAT CGATAAAGGTAA TTTTTGATTCACAAG TERM 736 565408 - 565383 - G 86 -9.1 -4.39166 | opp_overlap 565382 565383 CCCGATACAGCAAAA TACCTTTCTCG CCAT CGATAAAGGTA ATTTTTGATTCACAA TERM 737 565383 - 565408 + g 73 -9.1 -3.5125 | opp_overlap 565383, overlap 565382 CCCGATACAGCAAAA TACCTTTCTCG CCAT CGATAAAGGTA ATTTTTGATTCACAA TERM 738 565724 - 565770 + r 78 -10.9 -3.07816 | opp_overlap 565708 565705 565724, overlap 565758 CCCGTATGCAGCGAA GCGGAATACGGGGACGATAGA CGACA TCTTGTTTTCCCGTATTCCGC TTCGCTGCATACGGG CBUD_0587 566645 - 565809 - | hypothetical protein TERM 739 566342 - 566326 - G 95 -7.3 -5.55664 | GCAGCATCAAAAAAA GAAAAGG TAT CCTTCTC ACTAAGATTAATGTT TERM 740 566861 - 566815 - H 75 -10.2 -3.09516 | opp_overlap 566815 566823 566849, overlap 566821 GCCCGTATGAGCGAA GCGAAATACGGGGACAATAGAT GAC ATCTTGTTTTCCCGTATTCCGC TTCGCTGCATACGGG TERM 741 566815 - 566861 + H 75 -10.2 -3.07816 | opp_overlap 566815 566821, overlap 566823 566849 GCCCGTATGAGCGAA GCGAAATACGGGGACAATAGAT GAC ATCTTGTTTTCCCGTATTCCGC TTCGCTGCATACGGG TERM 742 567089 - 567103 + H 88 -11.4 -3.56142 | opp_overlap 567091, overlap 567085 CTCGTGTCTGCCAAG CAGGGC CGC GCCCTG TTAATTATTGGTAAG TERM 743 567480 - 567496 + G 95 -7.3 -5.55664 | GAGATTGATCTCAAT GAAGAGG ATA CCTTTTC TTTTTTTGATGCTGC TERM 744 567624 - 567638 + G 70 -7.8 -3.63589 | opp_overlap 567617, overlap 567614 TTATCTAATTGTAAC CTCGCT ATT AGCGGG TTTAAAAATATTTTA CBUD_0588 567177 - 568010 + | hypothetical protein TERM 745 568120 - 568166 + F 72 -9.7 -3.09516 | opp_overlap 568120, overlap 568128 ACCCCTATCAGCGAA GCGAAACACGGG-GACGATAGAT GAC ATC-ATTGTTTCCCGTATTTCGC TTCGCTCATACGGAC CBUD_0589 568437 - 568769 + | hypothetical protein sdhC 568782 - 569279 + | succinate dehydrogenase cytochrome b556 subunit TERM 746 569537 - 569521 - g 71 -2.2 -5.1101 | CGATTATGTAAAAAA CAAACC CATAC GGCTCG CTTTAGAGACTCTGG TERM 747 569576 - 569593 + G 70 -3.5 -4.87665 | gap 1 TTGTTAGTGGGCTAT TTCGTATG GGC CAT-CGAA TTTTTGTGGATAGCG sdhD 569267 - 569614 + | succinate dehydrogenase membrane anchor subunit TERM 748 569668 - 569651 - g 77 -8.5 -3.99315 | ATTAGAGTCAAACAA TACGATG CTCT CATCGTA GGAGCGGGCGGGGCG TERM 749 569981 - 570005 + G 72 -9.9 -2.78679 | opp_overlap 569981, overlap 569980 GGTCGCATCTATCAA CGCGCTTTTGG CGG CCACACGCGCG ATTTCGGTAAAGAAA TERM 750 570005 - 569981 - g 74 -9.9 -3.18264 | opp_overlap 569981 569980 GGTCGCATCTATCAA CGCGCTTTTGG CGG CCACACGCGCG ATTTCGGTAAAGAAA TERM 751 570192 - 570203 + G 78 -2.2 -5.44119 | CAATGAATATGGAAA CCAG TGAG TTGG TTTTTTTCAAATCAC sdhA 569627 - 571390 + | succinate dehydrogenase flavoprotein subunit TERM 752 571424 - 571412 - g 78 -4.1 -5.10029 | ATGAATTCTAAAAAA TCACG AAT CATGA CTTTCTCAATTATGC TERM 753 571989 - 572009 + G 73 -3.9 -4.94972 | opp_overlap 571992, overlap 571992 AAGAACGCCTCGATG CAATGAAGG ACC CCTACAGTG TTTTTCGTTGTCGTA sdhB 571397 - 572128 + | succinate dehydrogenase iron-sulfur protein TERM 754 572355 - 572336 - g 77 -10.8 -2.75064 | overlap 572333 572347 TTTCGCATGCAACCA TTCGCGAA GAAT TTCGCGAA TTAGCGCGTAAACCG TERM 755 572807 - 572791 - g 74 -4.5 -4.8543 | GAATCTTTAGAAAAA TATTTAG ATA CCAAATA TGTCGGCCAAGTTCG TERM 756 573192 - 573181 - g 73 -7.2 -4.12901 | opp_overlap 573190 CAAAATGGACACAAA CGCG ATTA CGCG ATGACCGTGATGATT TERM 757 573190 - 573218 + G 78 -7.4 -4.42748 | gap 1, opp_overlap 573181 CACAAACGCGATTAC GCGATGACCGTGA TGAT TCACGG-CGACGC TTCTTTTTCGGGTGA TERM 758 574603 - 574592 - g 85 -4.4 -5.44721 | opp_overlap 574592 ACGATCCGAAAAAAA TCAC CCGC GTGA TTTTGTGCAGTGGAA sucA 572152 - 574956 + | 2-oxoglutarate dehydrogenase E1 component TERM 759 575456 - 575446 - g 86 -3.2 -5.69262 | overlap 575452 575454 TTAGAAAAACAAAAA GAGA AAC CCTC CGAAGGAAAAGAAGG TERM 760 575725 - 575707 - g 73 -7.4 -4.14392 | GTTGAAGCGTTAAAA CGTTTTCC CAT GGTAAACG CCTCGATCGATGGTA sucB 574966 - 576183 + | dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex CBUD_0596 576196 - 576321 + | hypothetical protein sucC 576366 - 577538 + | succinyl-CoA synthetase beta chain TERM 761 578143 - 578121 - g 71 -8.6 -3.53811 | TCGACGTCTTGGAAA TGTTTGAAAA AGA TTCTCAAACA CAAGCCATCGTTATG sucD 577538 - 578422 + | succinyl-CoA synthetase alpha chain CBUD_0599 578419 - 578865 + | hypothetical membrane spanning protein enhA.1 579411 - 578884 - | enhanced entry protein TERM 762 581587 - 581599 + H 71 -4.1 -4.88405 | TTATACTTTTGATAT CTCTG GCT TAGAG TTTTATTTGCCCCTT TERM 763 582552 - 582534 - H 78 -7.4 -4.40184 | overlap 582536 GTAATGAAATAGAAA CGCAGTTG GCT CAACTGTG GCAAGAAGTATTGGA TERM 764 582839 - 582829 - H 81 -6.8 -4.8236 | opp_overlap 582828 CACGCAAAAAAACAA CAGG GAA CCTG AGTTATAACGCGCCT TERM 765 582888 - 582873 - H 71 -4 -4.90778 | TTGATTGAAATAAAA GGACAT TTAG ATATCC CTCGTTTAGAAGCCG TERM 766 583924 - 583891 - H 71 -5.3 -4.49364 | AAATTCAAGAAGAAA GTGGGGAAATGAAAT TGGT ATTTGAGTACCCCAC CGCTTTATTCAAGCC CBUD_0600c 584329 - 584493 + | hypothetical protein CBUD_0604 586175 - 585519 - | phosphoadenosine phosphosulfate reductase TERM 767 587431 - 587418 - g 71 -3.1 -5.01732 | AAGGGCTTGAAAAAA GAATG AATG CACTC ATGGCGATGGCAGAA CBUD_0606 586340 - 587728 + | non-ribosomal peptide synthetase module-containing protein map 588537 - 587725 - | methionine aminopeptidase CBUD_0607 589242 - 588592 - | hypothetical cytosolic protein TERM 768 589647 - 589635 - g 70 -7.7 -3.57561 | CTTGAAGTTCGTAAA GGAAG TTG CTTCC AAACGCGGCAAAGTG rpsB 589324 - 590403 + | SSU ribosomal protein S2P tsf 590413 - 591303 + | protein translation elongation factor Ts (EF-Ts) pyrH 591303 - 592034 + | uridylate kinase frr 592112 - 592669 + | ribosome recycling factor uppS 592666 - 593379 + | undecaprenyl pyrophosphate synthetase TERM 769 593698 - 593722 + G 80 -3.5 -5.41359 | overlap 593699 CTTGGGGTTTCAATA TCCGGCAGTAA AAT TGATTGTCGGG TTTTTTGCTTTAATT cdsA 593369 - 594187 + | phosphatidate cytidylyltransferase CBUD_0614 594365 - 595210 + | DoxD-like family CBUD_0615 596130 - 595246 - | hypothetical protein TERM 770 595577 - 595604 + g 80 -3.6 -5.27477 | gap 1 GGGTAAAGTAACTTC GCT-GTTAAATTT AAA AGATTTAGCGAGC TTTTTTCATTGGACT TERM 771 596883 - 596871 - g 73 -9.1 -3.41709 | opp_overlap 596871 596870, overlap 596869 GAAGAGAAACCAAGA GCGTC GAT GACGC GTTTAAAGCAGCGAT TERM 772 597081 - 597069 - g 75 -3.4 -5.09895 | TATGCACGGAAAAAA TCCA TTTAT TGGA AAAAAATCTTCAAAA CBUD_0616 596213 - 597814 + | hypothetical protein CBUD_0617 599267 - 598131 - | hypothetical protein CBUD_0618 599404 - 600576 + | hypothetical protein TERM 773 600588 - 600604 + T 74 -4.4 -4.92757 | gap 1, opp_overlap 600588 CTAAAAACTTAAAAC CCGT-CG TCCC CGCACGG TTTTGTTGTTAATCG TERM 774 600659 - 600645 - T 83 -12.8 -2.52896 | GTAGGCGGGAATCTA GCGCGC TTA GCGCGC AGCGCACGTAGTGCG mvaD/idi 602228 - 600717 - | diphosphomevalonate decarboxylase TERM 775 601077 - 601110 + g 72 -6.1 -4.40561 | gap 1, overlap 601078 601081 GCTGTGATATTTCTC CGGATGGC-GTTGTTG AAG CAATAACTGCCATTCA TTATTTTTACGAGAA TERM 776 601078 - 601109 + g 74 -9.6 -3.23855 | gap 1, overlap 601077 601081 CTGTGATATTTCTCC GGATGGC-GTTGTTG AAG CAATAACTGCCATTC ATTATTTTTACGAGA TERM 777 601081 - 601106 + g 72 -7.7 -3.74868 | gap 1, overlap 601078 601077 TGATATTTCTCCGGA TGGC-GTTGTTG AAG CAATAACTGCCA TTCATTATTTTTACG mvk 603162 - 602221 - | phosphomevalonate kinase TERM 778 602915 - 602925 + g 78 -2.4 -5.42259 | ATGTTAATATCGCAT CCGC TCG GCAG TTTTTTTGAAGCTAG TERM 779 603221 - 603249 + r 71 -9.5 -2.88155 | overlap 603216 603220 TTTCAATTTTAGGCT TCGCCATTCTCGC GCA GCGGGGATGACGG CTTTAAGCTTTTTAT CBUD_0621 604283 - 603261 - | mevalonate kinase TERM 780 603632 - 603655 + g 75 -7.4 -4.2772 | gap 1, opp_overlap 603610, overlap 603610 CGGAGATGCATTCAC CGGTGCTGCTT TGT GGGCAGC-CCG TTTGTATTAATTGCA TERM 781 603931 - 603944 + g 71 -2.3 -5.0917 | overlap 603932 TCAGTGACGATATCG ATGCC CGTT GGCAA TTTATTTTTTAATCG TERM 782 604162 - 604141 - G 100 -8.7 -5.56372 | overlap 604155 AAATGAAAAGAAAAA TGCAGCGGT AAAG ACCACCGCA CCGTGGCTTCCATGT TERM 783 604233 - 604220 - G 71 -9.5 -2.92613 | overlap 604217 GGTGACCGTAAACCA CGGCG TGTT CGCCG GAAAGAATTAATTTC hmgA 605353 - 604280 - | 3-hydroxy-3-methylglutaryl-coenzyme A reductase TERM 784 605384 - 605424 + H 93 -12.7 -3.89881 | opp_overlap 605368 605389 CGTAGCCCGTATGCA GCCAAGCGGATACGG GAAACAAGGCA CCGTATCCGCTTCGC TTTCTAGGGATTACT TERM 785 605419 - 605389 - H 72 -9.8 -3.07816 | opp_overlap 605384, overlap 605368 CCCGTATGCAGCCAA GCGGATACGG GAAACAAGGCA CCGTATCCGC TTCGCTTTCTAGGGA yaeT 605533 - 607944 + | outer membrane protein assembly factor TERM 786 608088 - 608103 + G 71 -9 -3.39803 | AGTGTAGCTGCTGTT GCCCAA ACGG TTGGGC TTGTCGATATGCGTC ompH 608022 - 608519 + | outer membrane protein TERM 787 608606 - 608565 - g 70 -9.5 -2.78712 | opp_overlap 608605, overlap 608562 608569 TCGTTAACTGAATTA GCAACCGCCATCGGC GCTACCGTCCAA GGCGATGGCGATTGC AAAATTCACAATGTT TERM 788 608772 - 608782 + G 71 -6.8 -4.12599 | opp_overlap 608778, overlap 608774 TTGGTGATGTCCAAT CCCA AAT TGGG TTTTGCCAAATTGTT TERM 789 609472 - 609497 + G 88 -9.7 -4.09864 | opp_overlap 609471 609474 609477 GGATGCAAACTAACC GAGAATGGCGC AAAA GCGTCATTCGC TTTTGGCAACTGGAT lpxD 608529 - 609557 + | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase fabZ 609554 - 609991 + | (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase TERM 790 610101 - 610082 - g 100 -8.6 -4.99947 | GCTAATCAAAGAAAA TGCCATCA TTGG CGATGGCA CTGAAATCGCAGCCC lpxA 609996 - 610775 + | acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase CBUD_0628 610772 - 611362 + | hydrolase family protein TERM 791 611409 - 611435 + T 71 -5 -4.62069 | AATAAACTCCTGTAG CCCGTATGGAGC AAA GCGGAATACGGG TTTTTAAAGTAAACA CBUD_0629 612987 - 611455 - | hypothetical membrane spanning protein CBUD_0631 614536 - 614048 - | hypothetical protein TERM 792 614633 - 614584 - R 100 -16.6 -3.1505 | gap 2, opp_overlap 614584 AGTAGCCCGTATGAA GCGCAGCGGAATACGGG--GGGAA ACGA TGCCAATCCCGTATTCCGCTGCGC TTCATACGGGCTACC TERM 793 614584 - 614633 + r 100 -18.8 -3.14931 | gap 2, opp_overlap 614584 AGTAGCCCGTATGAA GCGCAGCGGAATACGGGG--GGAA ACGA TGCCAATCCCGTATTCCGCTGCGC TTCATACGGGCTACC lpxB 615860 - 614694 - | lipid-A-disaccharide synthase TERM 794 615566 - 615551 - GR 78 -3.9 -5.1963 | opp_overlap 615565 GGTAATCAATAAAAA CCACC AAATCA GGCGG TGTTTTTTTAAAATA TERM 795 615565 - 615583 + gr 73 -6.8 -4.17089 | opp_overlap 615551 615580 615582, overlap 615582 ACCACCAAATCAGGC GGTGTTTT TTT AAAATACC TTTTCAAGGTTTGCA CBUD_0634 616797 - 615814 - | NAD-dependent oxidoreductase TERM 796 616568 - 616558 - GH 95 -4.6 -5.81412 | overlap 616559 GTTATCCAAAAAAAA CCGC GCC ACGG CGTGATGTAAAGGGG tadA 616989 - 617435 + | tRNA-specific adenosine deaminase CBUD_0636 617440 - 617568 + | hypothetical protein CBUD_0636a 617668 - 617802 + | hypothetical protein CBUD_0637 618003 - 618410 + | hypothetical protein CBUD_0638 618519 - 620609 + | hypothetical protein TERM 797 620758 - 620772 + T 73 -7.8 -3.86266 | AGGAATATCCAATTC CTCCTC GTT GGGGAG TTGTTGTAATCGTAT CBUD_0639 620857 - 620735 - | hypothetical protein ppa 620994 - 621521 + | inorganic pyrophosphatase TERM 798 621540 - 621587 + F 73 -8.7 -3.73224 | opp_overlap 621539 GTAGCCCGTATGAAG CGAAGCGAAATACGGGGA-GGTG CACG TATTGTTCCCGTATT-CGCTTCG TTTCATACGGGCTAC TERM 799 622611 - 622625 + G 76 -10 -3.28712 | TTGGCAAGGTTTAGG GCTTGC TGT GCAAGC TTATCAAAAACGAGC TERM 800 624121 - 624157 + G 75 -6 -4.67943 | gap 1, overlap 624128 GTCATTGTTTCTGCC TTTGATAGCGCTGGACA GCGC TGTTCAGCACT-TCGAA TTTTGTATATTCAGG TERM 801 624318 - 624304 - g 71 -5 -4.61527 | AAAATGCTGCAAAAA CACCAA GCA TTGATG CAAAAAGAAGCGAAA putA 621640 - 624780 + | delta-1-pyrroline-5-carboxylate dehydrogenase fkpA 624853 - 625545 + | FKBP-type peptidyl-prolyl cis-trans isomerase TERM 802 625572 - 625614 + F 100 -15 -3.07816 | opp_overlap 625572 625580, overlap 625580 CCCGTATGGAGCGAA GCGGAATACGGGAAATAATA CTG TACAATTCCCCGTATTCCGC TTCGCTCCATACGGG TERM 803 625614 - 625572 - f 100 -19.4 -3.07816 | opp_overlap 625572 625580, overlap 625580 CCCGTATGGAGCGAA GCGGAATACGGGAAATAATA CTG TACAATTCCCCGTATTCCGC TTCGCTCCATACGGG TERM 804 627808 - 627759 - g 79 -10.7 -3.14931 | opp_overlap 627769 627771, overlap 627765 TTTACCGGTTACGAA GGACAAGCATTGGCGATGGGAGA ACGT TCGCCCATCGCGATTGTTCATCC TGCTGCTTCTGCTCG TERM 805 627769 - 627798 + G 88 -10.7 -3.75738 | opp_overlap 627765 627759, overlap 627771 ACGAAGGACAAGCAT TGGCGATGGGAGA ACGT TCGCCCATCGCGA TTGTTCATCCTGCTG TERM 806 629340 - 629322 - g 75 -3 -5.0925 | opp_overlap 629322 629326, overlap 629324 TTTGAAAACGAAAAA CTTATCGC TTT GCGCTATG TGAATTACGCCGGCC purL 625641 - 629561 + | phosphoribosylformylglycinamidine synthase CBUD_0644 629920 - 629621 - | hypothetical protein TERM 807 630836 - 630823 - g 89 -6.7 -5.3689 | AGAAAGAAAACAAAA TGAGC AAAA GCTCA TTGAGGCAAAATTAC TERM 808 631845 - 631830 - g 73 -9 -3.54424 | overlap 631839 CTTTAGTTCGTGAAA TTCGCC AAAT GGCGAA TAGCCACAAACCGGT CBUD_0645 630104 - 631996 + | two component system histidine kinase TERM 809 632533 - 632556 + G 74 -10.2 -2.6741 | opp_overlap 632533, overlap 632532 632531 TAATAATTTTATTAA TGCTCCGGCG AGTT CGCTGGCGCA AGTTTTATTCTCGGT TERM 810 633232 - 633245 + G 71 -2.4 -5.14645 | ATATGCATTGGATGT TCCA GCACTA TGGA TTTTTGTTCCGTTCT CBUD_0646 632015 - 633505 + | hypothetical membrane spanning protein CBUD_0647 633548 - 634441 + | transporter, drug/metabolite exporter family CBUD_0648 635221 - 634460 - | coenzyme PQQ synthesis protein C TERM 811 635616 - 635604 - R 79 -3.4 -5.39721 | opp_overlap 635604 TGATTATATAAAAAA TAGC CCAGC GCTA TGAATTTCCATCGTT pdhC 636774 - 635638 - | dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex TERM 812 635699 - 635680 - G 74 -6.3 -4.57073 | opp_overlap 635680, overlap 635682 TAGCTGCTTCAAAAA CCGGGCG ATTTCG CCCCCGG TAATTACTCGATGAT pdhB 637754 - 636774 - | pyruvate dehydrogenase E1 component beta subunit TERM 813 637188 - 637205 + g 85 -4.1 -5.50723 | overlap 637189 GTCCAACGGCAGCGC CTTCCCA TCAT TGGGAAC TTTTTGTTTTACTAA TERM 814 637189 - 637204 + g 72 -7.6 -3.88807 | overlap 637188 TCCAACGGCAGCGCC TTCCCA TCAT TGGGAA CTTTTTGTTTTACTA TERM 815 637634 - 637653 + g 72 -9.2 -3.14683 | CTACCAACCCAACGG TGGCGCGG AAAA CCCCGCCA TTAATGCCGACATCT TERM 816 637854 - 637872 + r 79 -11.6 -2.52896 | AGCGCATACGTGCGC AGCGCGCC TTC GGCGCGCC TGGATTCCCGCCTGC TERM 817 637963 - 637988 + r 90 -11.1 -4.30719 | ACCCCTTCTCTCTAA CCTTCTCTCCC CGAA GGGTGAGAGGG TTTATTATCAGCCAA pdhA 639065 - 637959 - | pyruvate dehydrogenase E1 component alpha subunit CBUD_0652 640210 - 639062 - | leucine dehydrogenase TERM 818 640002 - 639992 - G 80 -4.6 -5.17054 | opp_overlap 640000, overlap 639993 639999 AGAATATTCAAAAAA GCGA CAA CCGC CGATAGCAGGTCCGC CBUD_0653 640246 - 640998 + | glycerophosphoryl diester phosphodiesterase ribD 640995 - 642059 + | 5-amino-6-(5-phosphoribosylamino)uracil reductase CBUD_0654 642375 - 642037 - | plasmid stabilization system toxin protein CBUD_0656 642644 - 642381 - | plasmid stabilization system antitoxin protein TERM 819 642939 - 642975 + H 75 -10.1 -3.14931 | opp_overlap 642952, overlap 642952 ACCGTAGCTGTGTGA GCGAAGTGAAATACAGG GTT CCCGTTTTCCGCTTCGC TTCATACGGGCTACG TERM 820 643608 - 643588 - g 70 -2.5 -5.02074 | overlap 643591 TTATTGTCCAAAAAA CAAGGGA GGCATTA TCCCATG CAAAAACCATTTGAT ribE 642999 - 643622 + | riboflavin synthase alpha chain ribAB 643606 - 644826 + | 3,4-dihydroxy-2-butanone-4-phosphate synthase ribH 644823 - 645278 + | 6,7-dimethyl-8-ribityllumazine synthase CBUD_0660 645271 - 646362 + | riboflavin transporter TERM 821 646462 - 646473 + F 70 -5.8 -4.46212 | opp_overlap 646462 ACCAGATTGGAATTA CTGC TTCC GCAG TTTTGTCATCCCGCC TERM 822 647260 - 647283 + F 86 -8.2 -5.0065 | CCTTTTCGAGAGGCT GATTCAGAGG AACT CTTCTGAGTC TTTTATTTCTGAGTC CBUD_0664 647800 - 648642 + | hypothetical protein TERM 823 648819 - 648829 + G 87 -8.2 -4.44797 | opp_overlap 648819 648818, overlap 648818 CATACATTGGAAAAT GGGG CTC CCCC TTTTGCTATTGATAG TERM 824 649999 - 650015 + G 75 -8.7 -3.69684 | opp_overlap 649997 649999 TTCTTGCGGAAAATA GTCGTCG AGC CGATGAC TTATTGGATGAATTT CBUD_0665 648666 - 650159 + | hypothetical protein CBUD_0666 650494 - 650162 - | hypothetical transcriptional regulatory protein recR 651113 - 650508 - | recombination protein TERM 825 650982 - 651008 + g 76 -10.3 -2.90496 | gap 1, opp_overlap 650988 650989, overlap 650980 TGATTGGAGGGCATC GGACAATGCCAA TCCT TTGGC-TTGTCC TGATTTCGCAAGAAG CBUD_0668 651556 - 651125 - | hypothetical protein dnaX 653195 - 651666 - | DNA polymerase III subunit gamma/tau TERM 826 653029 - 653041 + g 73 -5.5 -4.72272 | CACTTGGCAAGGATT CGACT AAT GGTCG TTTTTCCTACGCCGC CBUD_0669a 653363 - 653199 - | hypothetical protein TERM 827 653249 - 653237 - G 74 -6.2 -4.46757 | AAGACAGCCACAAAA GCCG CACCT CGGC ACCCAAATCCACCGC CBUD_0673 653761 - 654171 + | hypothetical protein CBUD_0673a 654161 - 654277 + | hypothetical protein CBUD_0673b 654309 - 654413 + | hypothetical protein TERM 828 656086 - 656068 - g 100 -10.3 -4.39889 | overlap 656082 ATAATTATATTAAAA CCCGCAT GATTA ATGCGGG TATACCTGCCGAGGC CBUD_0675 655659 - 656738 + | hypothetical protein dapE 657876 - 656752 - | succinyl-diaminopimelate desuccinylase TERM 829 657560 - 657572 + g 72 -6.2 -4.34402 | GCCGCGACGACCATG GCGG CTAAT CCGC TTTTCATATCAGCAG dapD 658697 - 657882 - | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase CBUD_0678 658873 - 658694 - | hypothetical protein TERM 830 658987 - 658942 - g 70 -7.9 -3.60792 | opp_overlap 658958 658968, overlap 658944 658957 GTTTTAATGTCCAAA TATTCATATCAAAAACGTGAT TTTT ATCACATTTTCTATATGAAAA ATGTGATTTATTTCA TERM 831 658985 - 658944 - g 78 -10.5 -3.38314 | opp_overlap 658958 658968, overlap 658942 658957 TTTAATGTCCAAATA TTCATATCAAAAACGTGAT TTTT ATCACATTTTCTATATGAA AAATGTGATTTATTT TERM 832 658972 - 658957 - g 71 -4 -4.81551 | opp_overlap 658958 658968, overlap 658944 658942 TATTCATATCAAAAA CGTGAT TTTT ATCACA TTTTCTATATGAAAA CBUD_0679 658873 - 659046 + | hypothetical protein TERM 833 659989 - 659957 - g 74 -9.7 -3.07816 | CCGGCACTGATTGAA GTGGCGCGCCGCAAC ACG GCTGCAGCACGCATC ACCCACGTTGTTCAT rhlE 659297 - 660559 + | ATP-dependent RNA helicase TERM 834 660807 - 660821 + F 89 -10 -4.26076 | GAGGACAGTCGGTTG TGTCGC TTC GCGACA TTTTAATAAAAATAG TERM 835 660849 - 660834 - f 74 -4 -5.09204 | gap 1, overlap 660836 ACATTTTAATAAAAA TAGCAGC GAA GCTGC-A CATAAACTGTCCTCT TERM 836 660848 - 660836 - f 85 -9.1 -4.16909 | overlap 660834 ATTTTAATAAAAATA GCAGC GAA GCTGC ACATAAACTGTCCTC TERM 837 661555 - 661571 + G 100 -5.9 -5.78622 | opp_overlap 661555 CCTCTGGCAAAAGAA TTTCTCT TGC AGGGAAA TTTTTTTTGGAATAG CBUD_0685 660997 - 662430 + | mannose-1-phosphate guanylyltransferase CBUD_0684 664032 - 662416 - | hypothetical protein CBUD_0686 664570 - 664025 - | histidinol-phosphatase TERM 838 664426 - 664439 + g 79 -3.1 -5.36441 | AACCCGCTGTTTTTA GACGT ACTA ATGTC TTTTTTGTGTCCGGA CBUD_0687 665154 - 664564 - | phosphoheptose isomerase CBUD_0688 665901 - 665158 - | transaldolase TERM 839 665211 - 665192 - G 72 -7.8 -3.75598 | CAATGAATTGAATAA CGAGAGGC TTGT GCATCTCG TGCGAACATTTGAAC TERM 840 667909 - 667890 - gH 73 -5.6 -4.4296 | opp_overlap 667893 667894, overlap 667893 GAATATATACCAAAA CGACCCGG GGAA CCGGATTG TACATGGGCTGATAT CBUD_0690 667092 - 668129 + | NAD dependent epimerase/dehydratase family TERM 841 668347 - 668363 + G 93 -10.9 -4.15565 | CCGCAAGATTTGCGT GCTGCTA ATT TAGCAGC TTTTGAAATGGTCGA CBUD_0691 668104 - 669684 + | D-glycero-D-manno-heptose-1-phosphate adenylyltransferase CBUD_0692 669687 - 670631 + | NADH-dependent dehydrogenase CBUD_0693 670616 - 671926 + | UDP-glucose 6-dehydrogenase CBUD_0694 671919 - 672824 + | NAD dependent epimerase/dehydratase family CBUD_0696 672827 - 673480 + | methyltransferase CBUD_0695 674664 - 673477 - | hypothetical protein CBUD_0698 675078 - 676496 + | sulfotransferase TERM 842 678708 - 678698 - g 71 -6.8 -4.18762 | overlap 678705 AACTCTTATTGAAAA CTGG AAA CCAG GGTCTAGTAATTATA TERM 843 679160 - 679189 + G 71 -4.3 -4.90296 | overlap 679162 GTATGAAGGGGTTGT TTCTCCAGTGCCA CCGG TGTTATTGGAGGA TTTTTATGAAGTTTT TERM 844 680107 - 680067 - g 100 -13.4 -4.25104 | TTTGCTTCATTAAAA GACGCCTTCGAGACACGT CAAGC ACGTGTCTCGAATAAGTC TAACTCGAATAAGTC CBUD_0699 676941 - 680279 + | hypothetical protein TERM 845 680467 - 680481 + G 84 -10 -3.75153 | opp_overlap 680466 680465 CCAAAGGCAAAATGC GATGCC CTA GGCATC TTTCGATTGGCAAGA CBUD_0699a 680368 - 680520 + | pyruvate dehydrogenase E1 component alpha subunit pdhAB 680507 - 681220 + | pyruvate dehydrogenase E1 component beta subunit CBUD_0701 681234 - 682880 + | hypothetical exported membrane spanning protein TERM 846 683165 - 683155 - f 89 -5.4 -5.42259 | opp_overlap 683155 GCACCTTCAAAAAAA TGCT TCA AGCA ATTTGTCAGCATACT TERM 847 683741 - 683729 - g 77 -6.3 -4.74285 | ATCGACAATATAAAA CACAA TAT TTGTG TGCCATGCCAACGAA wcaG 683260 - 684258 + | GDP-L-fucose synthase gmd 684251 - 685297 + | GDP-mannose 4,6 dehydratase CBUD_0704 685306 - 686163 + | polyprenyl-phosphate beta-D-mannosyltransferase CBUD_0705 686156 - 687394 + | methyltransferase CBUD_0706 688476 - 687415 - | pyruvate dehydrogenase E1 component beta subunit TERM 848 687984 - 687970 - G 73 -7.2 -4.16842 | TCGATGTTCAATAAA GATAAC TGG GTTATC ATCAAAAATGCTGGA TERM 849 688445 - 688461 + g 75 -2.3 -5.28176 | overlap 688434 TTTCTCAAGGCAGCG TTGATTC TAT GAATAAA TTTTTTCTGACTCAA CBUD_0707 689522 - 688473 - | pyruvate dehydrogenase E1 component alpha subunit CBUD_0708 690761 - 689649 - | glycosyltransferase CBUD_0709 692199 - 690823 - | hypothetical protein TERM 850 691420 - 691439 + g 73 -2.9 -5.20216 | CTTACCTTTAAAAAA TTGTTCA AGCTGC TGAGCAA TTTTTTGATAATCTG TERM 851 692184 - 692198 + g 87 -8.6 -4.46233 | TAATTAAGTATTTTT TGCGTA ATT TACGCA TTTATTTGAGCTTGC CBUD_0710 693346 - 692192 - | nucleotide-sugar aminotransferase TERM 852 692660 - 692638 - G 73 -8.4 -3.63515 | GTCGATTGGCAATAA CCGCCTGAAT CGT ATCCATGCGG CAATTAATACCATAT TERM 853 693167 - 693194 + g 78 -10.6 -3.32844 | gap 1, overlap 693168 TAATGCGTCAGCGCC TGTGCCA-ACGCC GAT GGCGTGTGGCGCG TTGTGCAATGCAGCA TERM 854 693168 - 693193 + g 83 -11.9 -2.59564 | gap 1, overlap 693167 AATGCGTCAGCGCCT GTGCCA-ACGCC GAT GGCGTGTGGCGC GTTGTGCAATGCAGC CBUD_0711 694537 - 693377 - | dTDP-4-dehydro-6-deoxy-D-glucose 4-aminotransferase CBUD_0712 695729 - 694560 - | hypothetical protein TERM 855 694713 - 694723 + g 79 -6.8 -4.69464 | overlap 694699 AGGTGTCTGGTTGAG TCGG AAA CCGA TTTTTAGCATGTTTT TERM 856 695780 - 695767 - H 88 -3.9 -5.71712 | opp_overlap 695767 GTCTATACAAAAAAA TATAG ATTA CTATA GTTTAGATTAAATAT TERM 857 696048 - 696032 - g 80 -3.7 -5.33405 | opp_overlap 696043, overlap 696034 TTGATCAAATAAAAA CATTGCT TGA AGCAATC AATATAAATATTATT TERM 858 696046 - 696034 - g 72 -6.3 -4.29436 | opp_overlap 696043, overlap 696032 GATCAAATAAAAACA TTGCT TGA AGCAA TCAATATAAATATTA TERM 859 696954 - 696940 - g 72 -7.2 -4.06778 | ATTAAAAAATGGAAA GAAAAG GCG CTTTTC AAACAACTACCTAAT CBUD_0713 695932 - 697491 + | sulfotransferase sat/cysC 699284 - 697527 - | sulfate adenylyltransferase TERM 860 697875 - 697886 + g 71 -4.4 -4.78572 | TTGAGCACATATTGC CATG CCAC CATG TTTTGTTACTTCAGA cysQ2 700099 - 699266 - | 3'(2'),5'-bisphosphate nucleotidase TERM 861 699319 - 699337 + g 86 -9 -4.32177 | opp_overlap 699310 699318, overlap 699310 CAAGAGCCAAGAATT TTGGATTT AAA AAATCCAA TTTATTGTAAAATAA TERM 862 700393 - 700405 + G 74 -4.9 -4.91109 | opp_overlap 700393 AGTCCCCTACCAAAA TCTAT GCA ATAGA TTTTTCTGATGAAAC TERM 863 700705 - 700692 - g 70 -8.1 -3.61774 | opp_overlap 700686 700684 700692, overlap 700684 TATAACACGGCTAAA GCAGC TTTG GCTGC TTATGTCAGAAGTTT CBUD_0716 700236 - 700985 + | 3-oxoacyl-[acyl-carrier protein] reductase CBUD_0717 700995 - 701858 + | O-antigen export system permease protein TERM 864 702463 - 702440 - g 71 -9.8 -2.60032 | opp_overlap 702446, overlap 702439 702446 TTTTGCGGAAAAAGC TAAAAATCGT CTAA ACGATTTTTA TAAGAACATTAACAC TERM 865 702457 - 702446 - g 74 -4.4 -4.92239 | opp_overlap 702446, overlap 702440 702439 GGAAAAAGCTAAAAA TCGT CTAA ACGA TTTTTATAAGAACAT TERM 866 702446 - 702457 + G 71 -4.4 -4.83169 | opp_overlap 702440 702439 702446 GGAAAAAGCTAAAAA TCGT CTAA ACGA TTTTTATAAGAACAT CBUD_0718 701868 - 702644 + | polysaccharide export ATP-binding protein CBUD_0720 703686 - 703393 - | hypothetical protein TERM 867 703514 - 703535 + g 81 -4.4 -5.37593 | GATAATAGTGGTTCA GCATCGTT AATGAA AACGAGGC TTTTTTGCTTTAAGA CBUD_0721 704455 - 703745 - | hypothetical protein CBUD_0721a 704859 - 704569 - | permease CBUD_0721b 704906 - 705307 + | hypothetical protein TERM 868 705372 - 705425 + T 100 -15 -3.28924 | gap 3 CGTTGGGCTTCGCAA GCTCAGCCCAACCTACGTGCTAAAATT ACC AATTTAAG--CG-AGGTTGGGCTGAGC TTGTGAAGCACAATA CBUD_0724 706282 - 705449 - | hypothetical protein CBUD_0725 706733 - 706590 - | hypothetical protein TERM 869 706813 - 706823 + r 73 -6.8 -4.21812 | TCTTGCTTTTTATCT CGGT GAC ACCG TTATTTTGACTAACG CBUD_0725a 707727 - 707620 - | hypothetical protein gacA.1 708359 - 707724 - | response regulator TERM 870 707813 - 707799 - G 73 -8.6 -3.57561 | GTTCAATTTTTTAAA TATCGC AAC GCGATA AGTGGAAACGGTTTT CBUD_0727 709746 - 708418 - | phosphate transporter TERM 871 708572 - 708557 - GR 93 -6.8 -5.4505 | TGGGGTAAGAAAAAA GCGCCT ACAA AAGCGC CTACCTTACCCCAAG TERM 872 708979 - 709011 + gr 88 -3.4 -5.78622 | opp_overlap 708979, overlap 708982 ATCCAGCAGAAACCA TGCACTCG-CCGTCCC AAT GAGACGGACGAGC-CA TTTTTTTTCAAATAA TERM 873 709334 - 709319 - GR 81 -4 -5.28683 | gap 1 AGCAAGACTAAAAAA CCACGTC TTT GAC-TGG GCGCATATTCGCTGG TERM 874 709553 - 709530 - GR 82 -6.6 -4.79053 | opp_overlap 709543, overlap 709531 709532 709541 AAACACCAAAAGAAA TGGCGCCAAC AGCC GCCGCCGCCA GCGCGGCGCCGTTTA TERM 875 709543 - 709564 + gr 100 -12.9 -3.73953 | opp_overlap 709530 709532 709541 709531 AATGGCGCCAACAGC CGCCGCCGC CAGC GCGGCGCCG TTTAATAAAGCTAAT CBUD_0728 710128 - 709718 - | hypothetical protein TERM 876 711586 - 711602 + G 81 -5.1 -5.0925 | opp_overlap 711588 TTCTATCGCTGAGAG CAGGC CTATACA GCCTG TTTTTGCTTTTAGGC TERM 877 711799 - 711787 - g 75 -9.1 -3.60323 | opp_overlap 711790, overlap 711785 CATTATCAAAGAATA CGCTC CCG GAGCG GAACTTTACTTTATG CBUD_0731 711539 - 712741 + | ornithine decarboxylase CBUD_0732 712765 - 713826 + | deoxyhypusine synthase speB 713826 - 714707 + | agmatinase CBUD_0734 715188 - 714763 - | hypothetical protein CBUD_0735 715469 - 715185 - | hypothetical membrane associated protein poxB 717395 - 715704 - | pyruvate dehydrogenase [cytochrome] TERM 878 716112 - 716080 - G 70 -9.2 -2.77222 | gap 2, overlap 716079 ATCAGCATCGTAAAC CCGCC-A-TCGCCGCA CAT CGCGACGACTTGGCGG CTGCGATCTAAGGCT TERM 879 716194 - 716182 - G 70 -7.7 -3.59402 | overlap 716178 GCCAGATTAAATGAA GCGAT AAA ATCGC GCTCACCTTTCATTT TERM 880 716940 - 716920 - G 90 -11.1 -3.97368 | opp_overlap 716916 716914, overlap 716921 GTGGGAATGGATAAA TGCGCGACA CCT TGTCGCGCT ATCGCTGTTTGTACG TERM 881 716939 - 716921 - G 100 -14.6 -2.981 | opp_overlap 716916 716914, overlap 716920 TGGGAATGGATAAAT GCGCGACA CCT TGTCGCGC TATCGCTGTTTGTAC TERM 882 717327 - 717308 - G 72 -9.3 -3.16564 | overlap 717323 TTGCCAGTGGATTAA TGGCGTC ACCGAA GACGCCA AAGATTTGACGATTG TERM 883 717429 - 717440 + H 75 -3 -5.19328 | opp_overlap 717429 TATTTGTTGACAGAA TAGA ATTA TCTA TTTTTATTGTCAAAT CBUD_0737 717543 - 718463 + | thioredoxin reductase family protein ampC 720772 - 719627 - | beta-lactamase TERM 884 720108 - 720125 + g 77 -4.9 -5.06816 | opp_overlap 720108 TTTCCGGCTGAATTA TAACCTT GCGC GAGGTTA TTTTTATTCGACGGT TERM 885 720618 - 720641 + g 71 -8.8 -3.35867 | opp_overlap 720607 720610, overlap 720622 AAAGTAACGGCCACC GCCATGCCGG GTAT TCGGCATTGC TTGATTACCGGTTGA CBUD_0740 720891 - 720769 - | hypothetical protein TERM 886 720938 - 720896 - H 100 -30.8 -3.33696 | opp_overlap 720896 CGTGTCGCCAATTAA CCCTGTCGTCGTCCCGCG CCTTGTC CGCGGGACGACGACAGGG TTAATTGACGACACG TERM 887 720896 - 720938 + H 100 -30.8 -3.33696 | opp_overlap 720896 CGTGTCGCCAATTAA CCCTGTCGTCGTCCCGCG CCTTGTC CGCGGGACGACGACAGGG TTAATTGACGACACG TERM 888 721892 - 721923 + G 73 -2.5 -5.10497 | gap 1 GGGAGTATGATAATG GCTAAATCTC-AAT TGGAT ATTGGATATTTAGC TTTTTTAGATCGATT TERM 889 722087 - 722073 - g 71 -3.4 -5.00616 | GCGTGGGTCAAAAAA CGACGC AAA GTGCCG TGCAATCTATTTTTC CBUD_0741 721025 - 722158 + | ABC transporter permease protein TERM 890 722638 - 722620 - g 95 -8.1 -5.14563 | gap 1, opp_overlap 722626 722630 GGTGGGATGAAAAAA CGCGCTGC TTTG GC-GCGCG CCATGGCTTTAGATC CBUD_0742 722155 - 722964 + | ABC transporter ATP-binding protein TERM 891 723467 - 723457 - g 87 -4.6 -5.52384 | overlap 723458 TTTTGATGAAAAAAA CCGC CGA GCGA TCAGCGCAAGTTTAG CBUD_0743 722948 - 723874 + | hypothetical protein CBUD_0745 723877 - 724476 + | hypothetical protein CBUD_0744 724943 - 724473 - | hypothetical protein CBUD_0746 725972 - 725046 - | hypothetical protein TERM 892 725808 - 725819 + g 85 -4.4 -5.56673 | GGTTAAATCTCCCTT CATC AATT GATG TTTTTTATTATAAAT CBUD_0747 726256 - 726032 - | hypothetical protein TERM 893 726260 - 726249 - Gg 71 -4.4 -4.89852 | CGATATGCATAAAAA GGAA ACAC TTCC GCTCCATTTGAATGG TERM 894 726558 - 726544 - gR 75 -10 -3.13403 | overlap 726542 CGTTTTTTACGAATA GGAACC GCC GGTTCC TTGCAACCGCAATGG CBUD_0748 726238 - 727086 + | uridine phosphorylase CBUD_0749 727760 - 727107 - | hypothetical protein tig 728064 - 729377 + | trigger factor, ppiase clpP 729387 - 729974 + | ATP-dependent endopeptidase clp proteolytic subunit TERM 895 730976 - 730989 + G 76 -8.1 -4.18494 | opp_overlap 730976 730974 AGAATTGGATGAAGA TGCGC TAAT GCGCA TTTTGACTGAGCCTA clpX 730029 - 731297 + | ATP-dependent endopeptidase clp ATP-binding subunit TERM 896 732985 - 732973 - g 74 -6.3 -4.5394 | AGAGAAATAGCAAAA CTTTG TCG CAAAG TGGTCAAAGAAATTT lon 731311 - 733764 + | ATP-dependent endopeptidase Lon TERM 897 734438 - 734456 + GT 95 -12.4 -3.29511 | opp_overlap 734435, overlap 734449 AGAAAAAACTATTCG CCGCCTTG GCG CGAGGCGG TTGTCGACGCGTCAA CBUD_0754a 735247 - 734948 - | hypothetical protein pmbA 733773 - 735095 + | microcin-processing peptidase 1 TERM 898 735285 - 735298 + Tr 84 -2.4 -5.75342 | GGGCTGTGTTTTATC CCTT ATTTAA AAGG TTTTTTTTGGGGGGA ptsH 735590 - 735321 - | phosphocarrier protein HPr TERM 899 735358 - 735374 + g 74 -6.5 -4.53398 | overlap 735359 TCATTAATTAACTTT TCGATGG CTT CCATCGC TTCTTTTTCGTCTTC TERM 900 735359 - 735373 + g 76 -10 -3.30412 | overlap 735358 CATTAATTAACTTTT CGATGG CTT CCATCG CTTCTTTTTCGTCTT hprK 736149 - 735571 - | HPr(Ser) kinase TERM 901 736113 - 736133 + g 100 -19.7 -3.74693 | AGGTTTGTTTGAGAG GCCCCGGGG TTT CCCCGGGGC TTTGATGAAGTGACA yfiA 736439 - 736149 - | ribosome-associated factor Y CBUD_0759 737287 - 736538 - | LPS ABC transporter ATP-binding protein yhbN 737805 - 737290 - | hypothetical protein TERM 902 737751 - 737724 - GR 73 -8.4 -3.61244 | opp_overlap 737731 737749, overlap 737720 CACTGGACAAAGCAA CGGCTAACAGGG GAAG CCCTGTTAGTAG CAGAAGCGCTATTTG CBUD_0761 738355 - 737768 - | hypothetical protein CBUD_0762 738868 - 738371 - | 3-deoxy-manno-octulosonate-8-phosphatase kdsD 739844 - 738870 - | arabinose-5-phosphate isomerase TERM 903 739381 - 739406 + g 84 -11.1 -3.62597 | overlap 739384 GTGGTGCTCGATGTC GGAGCCAGTCC GAGG GGACAGGCTTC TTGTTCAACGCTGAC TERM 904 739384 - 739403 + g 83 -9.2 -3.94877 | overlap 739381 GTGCTCGATGTCGGA GCCAGTCC GAGG GGACAGGC TTCTTGTTCAACGCT TERM 905 739643 - 739660 + g 80 -2.7 -5.42862 | ATGGCGTACCGGTGC TTGCC AACGTAGC GGCAA TTTTTTTGGCGATAT TERM 906 741235 - 741216 - g 80 -4.9 -5.10461 | opp_overlap 741215 741228, overlap 741218 741228 TGTATTGAAGAAAAA TTGGCGC AATTAG GCGCCGA AATTCGTCGCGTGTC murA 739995 - 741299 + | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 907 741926 - 741916 - g 70 -5.4 -4.56775 | ATTTCCTGGCAAAAA CATC GCT GATG AAACAGCCACGGTGT TERM 908 742003 - 742023 + G 76 -2.5 -5.40474 | GAAGGAAATTTTTAA GCTGGATGA TAA TAATCGAGC TTTTTTTAAAAAGAT CBUD_0765 741290 - 742231 + | esterase family protein CBUD_0766 742262 - 742444 + | hypothetical protein CBUD_0767 745610 - 742542 - | acriflavin resistance plasma membrane protein TERM 909 743818 - 743789 - G 77 -6.3 -4.64598 | TAAGCATGGCAAAAA CGGAGTCAAACGC TTTA GCGTTGGTATCCG CAACGGTAACCACTG TERM 910 744333 - 744357 + g 83 -8.7 -4.19276 | overlap 744334 GGTGATTTCTTTGCT TCCTTTAATAG CAG CTATTAAAGGC TTTTCGCCGTTTTCA TERM 911 744334 - 744356 + g 86 -12.2 -3.10843 | overlap 744333 GTGATTTCTTTGCTT CCTTTAATAG CAG CTATTAAAGG CTTTTCGCCGTTTTC TERM 912 745150 - 745167 + g 72 -6.3 -4.4078 | opp_overlap 745150 TTTCGTTCTAAATAA TCCCGAA TGGC TTTGGGA TTTTCATTGGGCGCC CBUD_0768 746704 - 745658 - | acriflavin resistance periplasmic protein degP.1 748059 - 746704 - | endopeptidase CBUD_0770 748927 - 748220 - | hypothetical cytosolic protein rluD 749870 - 748899 - | ribosomal large subunit pseudouridine synthase D comL 749942 - 750760 + | lipoprotein, ComL family TERM 913 751120 - 751139 + T 73 -5.6 -4.58685 | opp_overlap 751120, overlap 751120 751122 GAGTCTTTCAGCTAA GCTTCGCC CTTC GGCGAGCC TTTTTCAAAACCTTT TERM 914 751307 - 751323 + T 87 -5.1 -5.46629 | overlap 751291 TTCGTCCTTCGGCGA GGCCTTT TTC AAAGCCC TTTTTTTCGAGTCTT TERM 915 751473 - 751487 + T 86 -10 -4.08216 | ATAATTATGAGCGTT CGCTTG CTC CAAGCG TTTTAACAAGGGTAG TERM 916 751557 - 751528 - T 80 -4.3 -5.28281 | opp_overlap 751529, overlap 751519 751529 AGAAAAGAAATAAAA TCTCGTGCAAAAA TATG TTTCTGAACGAGT TCCATAATACCTGCC TERM 917 751556 - 751529 - T 70 -7.8 -3.73308 | opp_overlap 751529, overlap 751519 751528 GAAAAGAAATAAAAT CTCGTGCAAAAA TATG TTTCTGAACGAG TTCCATAATACCTGC gacS 752539 - 752165 - | sensor protein TERM 918 752661 - 752691 + H 100 -9.8 -5.64304 | gap 1 ACCTATTTTATTTTG GGCCAGCGATGCT TCAATC GGCAT-GCTGGCC TTTTTTATTATATTG TERM 919 752838 - 752819 - g 72 -7.8 -3.81146 | CGTTTGAAGGAAGAA CGCTTGGC CAGA GCAAAGCG GGTGCAAGCGGCGCG CBUD_0774a 752755 - 752865 + | hypothetical protein CBUD_0775 752798 - 753484 + | hypothetical protein CBUD_0776 753505 - 754095 + | hypothetical membrane spanning protein TERM 920 754120 - 754137 + T 70 -3.4 -4.99043 | GGGGATTTCTCATGC TGACCT TGGGAT GGGTCA TTTTATTTCTCGCGC TERM 921 755876 - 755886 + T 72 -3.2 -5.03227 | TTTTCGCAATTTTCG GCAG CTT TTGC TTTTGTTTCTGATAT TERM 922 756037 - 756053 + T 90 -12.3 -3.56862 | opp_overlap 756037 756036 756034 756033 TGAAGAAGAAATGAC CCCACTG ATA CAGTGGG TTTGCGAAAGTTTAT TERM 923 756053 - 756037 - T 83 -12.3 -2.5071 | opp_overlap 756037, overlap 756036 756034 756033 TGAAGAAGAAATGAC CCCACTG ATA CAGTGGG TTTGCGAAAGTTTAT TERM 924 756109 - 756132 + T 71 -6.8 -4.0921 | gap 1, opp_overlap 756109, overlap 756110 756128 TGAATTTTTAGTGAA TTTGCCTAACC GTT GGTT-GGCAAG TTATTTGCGTTTTAT TERM 925 757368 - 757381 + T 73 -6.7 -4.27681 | GCTTTTGCTTTATGG CGTTG GGAG CAACG TGTTTTTTGATTACT CBUD_0779 760278 - 758326 - | acetoacetyl-CoA synthetase TERM 926 758390 - 758414 + g 93 -4.4 -5.88471 | overlap 758376 758376 TCGAGAGCGGTTAAG TTATTAACCG ACTCG CCGTTAATAA TTTTTTTTACTGCTA TERM 927 759291 - 759260 - G 73 -3.6 -4.93296 | gap 1, overlap 759276 759279 GGAGTAGGATAAAAA GGCG-CGCCATCGTA AAG CACGACCGTGGCGCC GACGGCCAAACTACT CBUD_0781 760576 - 760707 + | hypothetical protein TERM 928 761609 - 761626 + G 87 -4.7 -5.47399 | AAGTATTGGGGACAT CGGCAGC ATTT GCGGCTG TTTTTTTAGCGTTAG CBUD_0782 761119 - 762681 + | multidrug resistance protein B CBUD_0782a 763071 - 762718 - | short chain dehydrogenase CBUD_0783 763134 - 763577 + | hypothetical protein CBUD_0784 763586 - 763708 + | hypothetical protein TERM 929 764423 - 764400 - g 70 -6 -4.30308 | opp_overlap 764399 764402, overlap 764397 764403 GAAAACAAATAAGAA TAACGTTGAG CTAG CTCAACGCTG CTTAAATCAATTGCA TERM 930 764420 - 764403 - g 88 -9.9 -4.19799 | opp_overlap 764402 764399, overlap 764400 764397 AACAAATAAGAATAA CGTTGAG CTAG CTCAACG CTGCTTAAATCAATT CBUD_0785 763765 - 765894 + | tetratricopeptide repeat family protein TERM 931 765929 - 765909 - f 83 -6.1 -5.09204 | opp_overlap 765909 765911 AGATTCCAAGAAAAA TAGGATCAG ATA CGGACCCTA TCATTACCCACAAGT TERM 932 766130 - 766166 + F 75 -9.5 -3.2794 | opp_overlap 766132, overlap 766131 766143 GAAATCCAGGCTAAA AAGCTAAGAAAAGCGCC ATC GGTGTTTTTCTTAGCCC TTAATCTGGGTCCCC TERM 933 766131 - 766165 + F 90 -13 -2.5655 | opp_overlap 766132, overlap 766130 766143 AAATCCAGGCTAAAA AGCTAAGAAAAGCGCC ATC GGTGTTTTTCTTAGCC CTTAATCTGGGTCCC TERM 934 766164 - 766132 - f 95 -12.1 -4.63184 | opp_overlap 766131 766130 766143 AATCCAGGCTAAAAA GCTAAGAAAAGCGCC ATC GGTGTTTTTCTTAGC CCTTAATCTGGGTCC TERM 935 766143 - 766153 + F 76 -4.6 -5.08088 | opp_overlap 766132, overlap 766131 766130 AAAAGCTAAGAAAAG CGCC ATC GGTG TTTTTCTTAGCCCTT TERM 936 766749 - 766764 + F 74 -4.8 -4.7329 | AAAATTATCAATTTT CAATAA AAAA TTATTG TTTTTCGATAATTTT TERM 937 767167 - 767180 + G 79 -3.1 -5.4148 | TGTGGGAAGGTGGGT TTACC ATCT GGTGA TTTTTTACTTCTTTA CBUD_0785c 767099 - 767341 + | hypothetical protein CBUD_0788 767345 - 767575 + | transcriptional regulator, Cro/CI family TERM 938 767633 - 767576 - f 100 -13.2 -4.44307 | gap 1, opp_overlap 767582, overlap 767628 TATAAAAAAGAATAA CGATAATTCCCCAAATAAATAA-CTTG TGTCT CAAGGTTCTTTATTTAGGGAATTCTCG TCAGGACGACAAAAT TERM 939 767680 - 767668 - f 74 -6.3 -4.38092 | overlap 767665 CAACAACTAAAACAA TAGGA GTA TCCTA TGAAAAACATCAAAA CBUD_0789 767680 - 768105 + | hypothetical protein CBUD_0790 769980 - 768535 - | carboxypeptidase S1 TERM 940 770189 - 770167 - H 91 -13.4 -3.05844 | CCGCGTAGGCGAAGA CCCAGCGCAC TAT GTGCGCTGCG CGCTAAAAGACGGTA TERM 941 770365 - 770401 + H 70 -9.5 -2.5655 | opp_overlap 770367, overlap 770364 770378 GGGAATCCCGGCTAA AAGCTAAGAAAAGCGCC ATC GGTGTTTTTCTTAGCCC CTTAATCTGGGTCCC TERM 942 770399 - 770367 - H 91 -12.1 -4.08692 | opp_overlap 770365 770364 770378 GAATCCCGGCTAAAA GCTAAGAAAAGCGCC ATC GGTGTTTTTCTTAGC CCCTTAATCTGGGTC TERM 943 770378 - 770388 + H 76 -4.6 -5.06816 | opp_overlap 770367, overlap 770365 770364 AAAAGCTAAGAAAAG CGCC ATC GGTG TTTTTCTTAGCCCCT TERM 944 770618 - 770639 + H 75 -7.9 -4.08767 | gap 1 TAAGTTGACGCCTAT GCGC-CCAGG AGT CCAGGCGCGC TTTTAGCGCGCTGCG CBUD_0792 770661 - 770870 + | hypothetical protein TERM 945 772616 - 772643 + GF 72 -9.3 -3.20207 | opp_overlap 772614 772615 772616 772618 TTTATGCGAAAAAGC CATAGCATTGG GCAACG CTAATGCTATG TTCATCCGTGCTGTT CBUD_0794 772260 - 773033 + | hypothetical protein TERM 946 773625 - 773609 - gT 78 -5.2 -4.92777 | AAGACGAAGGAAAAA TCAGAA AATAA TTCTGA ACGGTCCTGCATTCT CBUD_0795 772889 - 773647 + | tetratricopeptide repeat family protein TERM 947 773668 - 773680 + T 70 -3.3 -4.85599 | opp_overlap 773668 AATAGAGACTTAAAT CGGAT CTT AACCG TTTTTATAAGATCAC CBUD_0796 775002 - 773692 - | hypothetical membrane associated protein TERM 948 774420 - 774408 - G 74 -6.2 -4.56133 | opp_overlap 774407 774408 TGCCAACAACGAAAA GGGC GGCAA GCCC ATTGCTGAATAGCAC TERM 949 777609 - 777633 + G 78 -9.3 -3.73122 | opp_overlap 777597, overlap 777597 777602 AGACAATGGCTGATG GCAATTGTGCT TTG AGCGCCATTGC TTTAGGCTTGTTGTA CBUD_0797 775412 - 778507 + | hypothetical protein CBUD_0798 778694 - 778882 + | transposase CBUD_0799 779117 - 779602 + | hypothetical protein pcoA 782064 - 779653 - | copper resistance protein B TERM 950 780518 - 780478 - G 100 -9.8 -4.65168 | gap 1, overlap 780462 780517 ATGACAGTGGAAAAA CCATTGACCGCTGGCATCG GTAT CAATGTCAGCGA-CAACGG TAGCGCCGGGTGGCA TERM 951 780894 - 780904 + g 81 -5.4 -5.1104 | TAGTGGGCTCAGTCG GCAT TTC ATGC TTTTTGTGTCTATTT CBUD_0801 784627 - 782078 - | dTDP-glucose 4,6-dehydratase TERM 952 782276 - 782256 - G 75 -5.3 -4.76075 | opp_overlap 782257 782260, overlap 782257 AGGACATTAATAAAA CGAAGAGGC CGC GCCACTTCT GCTGTGGCAATAATA TERM 953 782275 - 782257 - G 73 -8.8 -3.4456 | opp_overlap 782257 782260, overlap 782256 GGACATTAATAAAAC GAAGAGGC CGC GCCACTTC TGCTGTGGCAATAAT TERM 954 782397 - 782383 - G 95 -5.6 -5.66989 | TAAATAGGAAAAAAA GCCCGA TAA TCGCGC TGGATAATAATGTCC TERM 955 782458 - 782475 + g 77 -4.9 -5.01811 | gap 1 TGGTGGCCGTACGCG GCGA-AGT AAG ACTATCGC TTTTTGCTTTGGTAC TERM 956 783531 - 783562 + g 70 -6 -4.26903 | gap 1 ATGCGTTGAATTTCA TCTTGCTGCTGAG TTTTTTT CTCAGCGG-AAGA TTTTAGTGGAGTCGC TERM 957 784496 - 784513 + g 71 -6.9 -4.07885 | ACAAACACATTCAGC GGCTGGC GGGG GCTGGCC TTTTGCCACGCGATC qacE 785052 - 784726 - | quaternary ammonium compound-resistance protein TERM 958 786083 - 786068 - R 93 -6.8 -5.4833 | GCATGTAATAAAAAA CAGAGG GGCT CCCCTG GATGGATTTTTTTTG CBUD_0804 786966 - 786139 - | hypothetical protein CBUD_0805 787037 - 787372 + | hypothetical protein CBUD_0807 789292 - 788099 - | multidrug resistance transporter, Bcr family TERM 959 788390 - 788378 - G 73 -2.7 -5.24129 | overlap 788379 CGTTGTCATAAAAAA CCATA AAA TATGA CTGTGATTCGCAAGT CBUD_0808 789430 - 790314 + | transcriptional regulator, LysR family CBUD_0809 790315 - 790962 + | hypothetical protein CBUD_0810 791011 - 791712 + | BRAMP TERM 960 791706 - 791746 + F 100 -15.5 -4.94262 | opp_overlap 791709, overlap 791709 AAGACATGGTGAATC CAAGTAGCCCGTATTCCGC TTC GCTGCATACGGGCTACTTA TTTATTTTTGATGTC TERM 961 791743 - 791709 - f 100 -17.2 -3.17901 | opp_overlap 791706 791709 ACATGGTGAATCCAA GTAGCCCGTATTCCGC TTC GCTGCATACGGGCTAC TTATTTATTTTTGAT TERM 962 791709 - 791743 + F 100 -17.2 -4.53857 | opp_overlap 791709, overlap 791706 ACATGGTGAATCCAA GTAGCCCGTATTCCGC TTC GCTGCATACGGGCTAC TTATTTATTTTTGAT CBUD_0811 791820 - 792461 + | hypothetical protein TERM 963 793187 - 793177 - g 70 -2.6 -4.91873 | opp_overlap 793177, overlap 793171 GAGATTAACGAAAAA TAAT CTT ATTA ATCTTCTTTCAAAAA CBUD_0812 792464 - 793342 + | hypothetical protein TERM 964 793473 - 793429 - T 100 -15.3 -3.07816 | gap 1, opp_overlap 793412 793429 793437, overlap 793437 793461 793462 CCCGTATGCAGCGAA GCGGAATACGGGAGTTA-GA TACAAT TCTTAAATCCCGTATTCCGC TTCGCTGCATACGGG TERM 965 793429 - 793473 + T 100 -15.3 -3.07816 | gap 1, opp_overlap 793429 793437 793461 793462, overlap 793412 793437 CCCGTATGCAGCGAA GCGGAATACGGGAGTTA-GA TACAAT TCTTAAATCCCGTATTCCGC TTCGCTGCATACGGG TERM 966 793488 - 793462 - T 77 -10.8 -2.77501 | opp_overlap 793437 793429, overlap 793437 793429 793461 ATACAATTCTTAAAT CCCGTATTCCGC TTC GCTGCATACGGG CTACGTGTTTTGCTT CBUD_0813 794367 - 793489 - | transcriptional regulator, LysR family CBUD_0814 794463 - 795461 + | multidrug resistance protein B TERM 967 797026 - 797000 - g 76 -10.3 -3.05463 | gap 1, opp_overlap 796988, overlap 797004 797013 AGTCGTTTGATGTAA TGCACTGGCATA ATGA TATGCCAG-GCA TACCAAAGGACGTAG TERM 968 797023 - 797004 - g 76 -10.8 -2.54896 | opp_overlap 796988, overlap 797000 797013 GTTTGATGTAATGCA CTGGCATA ATGA TATGCCAG GCATACCAAAGGACG CBUD_0817 796594 - 797280 + | GMP synthase [glutamine-hydrolyzing] CBUD_0818 797447 - 798712 + | hypothetical ATPase prpB 798884 - 799756 + | methylisocitrate lyase prpC 799749 - 800867 + | 2-methylcitrate synthase TERM 969 800900 - 800882 - g 71 -2.3 -5.19212 | overlap 800887 ATTATGAGTAAAAAA CCAACGG CAATC CCGCCAG GCTATCACAGCATTA phnB 800870 - 801340 + | PhnB TERM 970 801430 - 801416 - f 87 -5 -5.40072 | TTCCCCCTAAAAAAA TTTGCA CAA CGCAAA CTCTAGTGTTATACT pspC 801436 - 801723 + | stress-responsive transcriptional regulator TERM 971 802010 - 801988 - g 73 -2.8 -5.13741 | overlap 801991 801993 TTAACCCAAGAAAAA CAATATTTTT TAA AAAAACAATG GCCGCAAATTAAAAA CBUD_0823 801730 - 802071 + | transcriptional regulator, GntR family TERM 972 802871 - 802854 - g 71 -3.3 -5.00765 | overlap 802856 AATGAATTAGAAAAA TACGGCG AAAT CACCGTG CCCTCTATTAGCGAC CBUD_0824 802068 - 802919 + | ABC transporter ATP-binding protein CBUD_0825 802916 - 803830 + | ABC transporter permease protein pfpI 804364 - 803846 - | protease I CBUD_0827 804800 - 804402 - | hypothetical protein gacA.2 805006 - 805656 + | response regulator CBUD_0829 805721 - 806737 + | ankyrin repeat protein TERM 973 806880 - 806911 + F 79 -8.6 -3.96681 | AATCGTAATTGCTCG CCCGTCATCCCCGC GCAG GCGCGAATGACGAG TTATTAATTTATTGG TERM 974 806972 - 806991 + G 73 -5.8 -4.4595 | gap 1, overlap 806973 806974 CGCTATTTACCTCAC TA-CCATCC GCT GGATGGATA TTTTAGCTTTTCTAA TERM 975 806974 - 806988 + G 72 -10 -2.87699 | overlap 806973 806972 CTATTTACCTCACTA CCATCC GCT GGATGG ATATTTTAGCTTTTC TERM 976 807404 - 807394 - g 74 -4 -5.06472 | opp_overlap 807394 AGAGAAAGAATAAAA GAAT TCA ATTC TTTGGCTTTAAAGTT CBUD_0830 806937 - 808325 + | hypothetical protein TERM 977 808462 - 808450 - f 74 -4.1 -5.00884 | overlap 808453 ATTTTTTGTAAAAAA TATCG CAA CGACA ATAGGTGCGCGTTTG TERM 978 809433 - 809418 - f 76 -3.2 -5.28176 | overlap 809423 CTGACCGAGAAAAAA GAAGTG CGAC CACTGC CAGTAACCTGAAGCA CBUD_0830c 809463 - 809570 + | hypothetical protein CBUD_0832 809840 - 811012 + | CoA-transferase family III protein TERM 979 811178 - 811159 - g 71 -5 -4.59773 | CGTGACCTCGAAAAA TGTGCTAA TCGC TTAGCTCA CTATCTGGAACGTCA CBUD_0833 811048 - 812592 + | peptide synthetase TERM 980 814283 - 814256 - g 70 -3.6 -4.84017 | gap 1, overlap 814259 AATTTCTTAGAAAAA CAA-CAAAGTG CTTCCCC CACTTTGCTTG CAGATTTAGCTTATA TERM 981 814279 - 814259 - g 70 -5.5 -4.52873 | overlap 814256 TTCTTAGAAAAACAA CAAAGTG CTTCCCC CACTTTG CTTGCAGATTTAGCT CBUD_0834 812582 - 817420 + | polyketide synthase TERM 982 818401 - 818391 - g 79 -6.8 -4.71061 | ATTCAGAGGCAAAAA GCTG AAG CAGC AAACAAAGCCAAATC TERM 983 819235 - 819222 - g 71 -6.7 -4.21275 | opp_overlap 819211, overlap 819211 819223 CGAATCGATTTAAAA GCGAA TGTT TTCGC TGAAGGCGCAAAACC TERM 984 819298 - 819315 + G 100 -11.3 -4.17316 | AAGACAATGCGTTAG CGGCTAC GGCA GTAGCCG TTGTTTTAAAGCCAT CBUD_0835 817536 - 820031 + | two component system histidine kinase TERM 985 820389 - 820379 - T 78 -4 -5.26316 | CCAGTCTAGAAAAAA GAAA GCA TTTC AAGGATACCCCCATC TERM 986 824384 - 824397 + T 76 -6.7 -4.46212 | ATTGCCTTTGGAGGA GCAAC AGCC GTTGC TTTTATGCTGCCGCC TERM 987 824949 - 824925 - T 83 -5.2 -5.32599 | gap 1, overlap 824929 TACAAAACAGAAAAA CGAATGTCATT AGAA AATGACATT-G CAAAGATAGCCATGT TERM 988 824946 - 824929 - T 71 -7.1 -3.95047 | overlap 824925 AAACAGAAAAACGAA TGTCATT AGAA AATGACA TTGCAAAGATAGCCA CBUD_0840 826298 - 825048 - | hypothetical cytosolic protein TERM 989 825207 - 825182 - G 73 -9.9 -3.01924 | opp_overlap 825170, overlap 825184 TATTTGTGGCTAACA CAGTACTTATT GAGT AATAAGCACTG TAACCGCAATTGGAA CBUD_0841 827520 - 826291 - | hypothetical cytosolic protein TERM 990 826499 - 826478 - G 73 -3.9 -5.00616 | gap 1, opp_overlap 826482, overlap 826483 TTTTTTCTTAAAAAA TCAAT-TTGA GCT TCAAGATTGA TAAGGTTGCTGTAGT CBUD_0842 827805 - 827557 - | hypothetical protein TERM 991 827784 - 827770 - G 72 -6.4 -4.31943 | TTTATATAAAAAATA CCGCAT TGA ATACGG GGTCATGTTAACATT CBUD_0844 827880 - 828401 + | hypothetical protein CBUD_0845 828803 - 828579 - | phosphotransferase TERM 992 828831 - 828849 + r 70 -2.5 -5.17507 | GTAGCGATCAAATGG TAGATGA GTGCG TTATCTA TTTTTGTTAGGTTTT CBUD_0846 830075 - 828843 - | multidrug resistance transporter, Bcr family TERM 993 830125 - 830107 - H 90 -7.4 -5.252 | overlap 830109 830121 TATCGCTATAAAAAA CACCGTAT TGA ATACGGGG TATCCCGAAAAAGTA TERM 994 830123 - 830109 - H 82 -8.6 -4.25873 | overlap 830107 830121 TCGCTATAAAAAACA CCGTAT TGA ATACGG GGTATCCCGAAAAAG TERM 995 830271 - 830252 - g 86 -7.8 -4.62336 | ATTTCAGCTTAAAAA CGTTGGTC AAGC GACCTACG AAGACTTAAAAAAGC CBUD_0847 830223 - 830498 + | hypothetical protein CBUD_0848 830563 - 832098 + | hypothetical protein TERM 996 832263 - 832206 - f 100 -21 -3.1505 | gap 1, opp_overlap 832211 832262, overlap 832211 832217 AGTAGCCCGTATGAA GCGAAGCGAAATACGGGAAAATAATGA TATCG TCAAT-CTTCCCCGTATTTCGCTTCGC TCATACGGGCTACTT TERM 997 832258 - 832211 - f 85 -12.3 -3.20723 | gap 1, opp_overlap 832211, overlap 832206 832217 CCCGTATGAAGCGAA GCGAAATACGGGAAAATAATGA TATCG TCAAT-CTTCCCCGTATTTCGC TTCGCTCATACGGGC TERM 998 833128 - 833111 - g 73 -2.8 -5.15634 | overlap 833118 833125 GATCGTATTAAAAAA GAAATA AGGCAA TATTTC GCCGGAAAAAGAATG TERM 999 833131 - 833118 - g 71 -4.5 -4.59882 | overlap 833111 833125 TTAAAAAAGAAATAA GGCAA TATT TCGCC GGAAAAAGAATGGTG CBUD_0849 832385 - 833440 + | ADA regulatory protein TERM 1000 833600 - 833586 - g 93 -4.2 -5.90981 | GCAGATGAAAAAAAA GAGCCC ATT GAACTC AATCTGAATTATGAT CBUD_0850 833460 - 833849 + | hypothetical protein CBUD_0851 834189 - 833893 - | hypothetical protein CBUD_0852 834920 - 834240 - | transcriptional regulator, LuxR family TERM 1001 835153 - 835108 - R 71 -6.9 -4.06185 | gap 1, opp_overlap 835101, overlap 835101 835145 GATATAAACACTAAA CGGACTTAGTGCTTGTCA-GCA CCA TGAATGTGAAGCACTAGGTCCG CACCTAACTCTATTT CBUD_0853 836021 - 835167 - | transcriptional regulator, AraC family TERM 1002 836219 - 836237 + r 71 -6 -4.28432 | opp_overlap 836221 TTCCAAAGCCCGTAA TACCGTAT TGG ATACGGGA TTTTAAATTAGCATT CBUD_0854 837924 - 836320 - | ABC transporter ATP-binding protein TERM 1003 837156 - 837169 + g 77 -3.8 -5.10154 | CTTTGGTTTTTTGAA CGCT TTTTTC AGCG TTTTTAATTTTACAT TERM 1004 838197 - 838231 + H 79 -8.6 -4.08692 | opp_overlap 838195 838209 GGACCCGGATTAAGG GGCTAAGAAAAACACC GAT GGCGCTTTTCTTAACC TTTTAGCCGGGATTC TERM 1005 838219 - 838209 - H 76 -4.6 -5.06816 | opp_overlap 838197, overlap 838195 AGGGGCTAAGAAAAA CACC GAT GGCG CTTTTCTTAACCTTT CBUD_0855 838422 - 838571 + | hypothetical protein CBUD_0855a 838762 - 838598 - | hypothetical protein CBUD_0856 839948 - 838809 - | hypothetical protein TERM 1006 839049 - 839067 + g 75 -8.8 -3.68911 | opp_overlap 839047, overlap 839053 TGAATTTGGAAGATT GATAGCGG TTG CCGCTACC TCTTTAGTTTCTATT TERM 1007 840392 - 840381 - H 75 -5.8 -4.67011 | AAGGTTATCGAAAAA GCCA CTTT TGGC ATGACACCCGCAATT CBUD_0858 840558 - 842900 + | penicillin acylase CBUD_0859 844414 - 842969 - | L-gulonolactone oxidase TERM 1008 843572 - 843558 - G 86 -2.8 -5.7946 | opp_overlap 843558 GGCTTAATAAAAAAA TCCATA CTC TCTGGA TTAATTAATTTTTTT TERM 1009 844548 - 844525 - R 89 -6.8 -5.18866 | opp_overlap 844524 844528, overlap 844528 CGTAAAGAAAGAAAA GAAGTCATGT CTTT ACATGACTTA AGTTTTTCTGATGAG TERM 1010 844528 - 844545 + r 72 -8.5 -3.4968 | opp_overlap 844528 844525, overlap 844524 AAAGAAAGAAAAGAA GTCATGT CTTT ACATGAC TTAAGTTTTTCTGAT TERM 1011 844545 - 844528 - R 87 -8.5 -4.64595 | opp_overlap 844524 844528, overlap 844525 AAAGAAAGAAAAGAA GTCATGT CTTT ACATGAC TTAAGTTTTTCTGAT TERM 1012 844778 - 844758 - R 82 -11.1 -3.44443 | overlap 844752 CCCACATAAGACCAA TCGGCGGTG TTT CACCGTCGA ATCGAGCGTGATAGC TERM 1013 845772 - 845786 + r 70 -8.6 -3.32405 | opp_overlap 845769, overlap 845770 845774 845776 GGATAAAATTTATTA GCTTCT AGG AGAAGC TCTTCTAGTGATTTT TERM 1014 846190 - 846176 - R 80 -2.2 -5.66989 | GAAATATTAAAAAAA TATCTT CAA AAAATA TTTGTCTTACCTGCA folE 847108 - 846542 - | GTP cyclohydrolase I CBUD_0864 847449 - 847108 - | adenosine 5'-monophosphoramidase TERM 1015 847474 - 847508 + r 81 -11.7 -2.62184 | gap 1, opp_overlap 847472 CCTTCAATTAAATTT TCTCTGTTATTCCTGT AGAA GCAGGAATAACAG-GA TCGTCTACGGGAGCA CBUD_0865 849046 - 847466 - | multidrug resistance protein B emrA 850042 - 849047 - | multidrug resistance protein A CBUD_0866a 850066 - 850191 + | hypothetical protein TERM 1016 850231 - 850246 + G 71 -9 -3.38522 | overlap 850228 TGGGTATTGATGTAT GGCGTT TGCG AACGCC TGTTTCAAATCACTA CBUD_0867 850188 - 850601 + | hypothetical protein TERM 1017 850665 - 850684 + G 72 -6.4 -4.38322 | overlap 850667 CTGAAGCAGCGATGC CATTTCCG TGGT CGGAAAAG TTCTTTTATGATTGC TERM 1018 850696 - 850710 + G 70 -7.2 -3.82378 | overlap 850693 AAAGTTCTTTTATGA TTGCTT GAA AAGCAA TTATTATGGATGGGT rimI 850598 - 851035 + | ribosomal-protein-S18-alanine acetyltransferase CBUD_0869 851862 - 851056 - | hypothetical protein TERM 1019 852536 - 852550 + G 71 -8.5 -3.42124 | overlap 852545 AAAAAGTCGTTAACG CGCCG TTTTC CGGCG TTCTCGGTGCTTTTC TERM 1020 852604 - 852592 - g 82 -10.5 -3.62096 | opp_overlap 852585 GGTGATTACGTGAAA GCGGG GGA CCCGC TGGTGACGTTAGTTA CBUD_0870 852040 - 853095 + | acriflavin resistance periplasmic protein TERM 1021 853508 - 853524 + G 100 -8.7 -4.71426 | opp_overlap 853507 GGGACCAAAGGCAAT CCGGTTC TGG GAATCGG TTTTATTGATCCGCA CBUD_0871 853103 - 856141 + | acriflavin resistance plasma membrane protein CBUD_0872 856618 - 856505 - | hypothetical protein CBUD_0872a 856829 - 856722 - | hypothetical protein CBUD_0873 856887 - 858026 + | beta-lactamase family protein valS 860820 - 858058 - | valyl-tRNA synthetase TERM 1022 859665 - 859689 + g 72 -6.5 -4.41047 | opp_overlap 859665, overlap 859669 ACCATTGCAAATAAG TTTTTTCCCAA TTT TTGGGAATGAA TTTTAATTCGCCGCT TERM 1023 859669 - 859685 + g 70 -9.5 -2.80479 | opp_overlap 859665, overlap 859665 TTGCAAATAAGTTTT TTCCCAA TTT TTGGGAA TGAATTTTAATTCGC CBUD_0875 860957 - 862075 + | hypothetical membrane spanning protein CBUD_0876 862063 - 863130 + | hypothetical membrane spanning protein TERM 1024 863276 - 863264 - g 100 -10.5 -4.3534 | CCGGAACGATTAAAA GCCGC AAG GCGGC TCGTCACGCCACTTC TERM 1025 864053 - 864065 + G 80 -4.8 -5.1615 | TGGACCCTGGTCATC GCGA CCGCA TCGC TTTTTTGCGTATTGC prfC 863131 - 864708 + | bacterial peptide chain release factor 3 (RF-3) TERM 1026 865330 - 865340 + F 70 -2.6 -5.10656 | TATCCAGGCGTATCT TAAT ATT ATTA TTTTATTGTTTTGCT TERM 1027 866139 - 866125 - f 79 -11.4 -2.71712 | overlap 866124 GGCGTCCCCGCAAAG GCGCTG ACC CAGCGC ACGGCACGCGCAGCG TERM 1028 866456 - 866446 - g 73 -5.4 -4.67904 | opp_overlap 866444 866446 GATCAAGCGGAAAAA TGTG CAT CACA TGGTTTGTATTTTTC CBUD_0879 866368 - 866826 + | hypothetical protein TERM 1029 866938 - 866902 - T 70 -3.2 -4.84017 | gap 1, overlap 866904 866907 866912 AAGCTGTTAGAAAAA TA-TTAGCTAAGTAGCT AAGT AGCTAAGTAGCTAAGTA GCTAAGTAGCCCGTA TERM 1030 866935 - 866904 - T 73 -7.4 -4.03995 | overlap 866902 866907 866912 GCTGTTAGAAAAATA TTAGCTAAGTAGCT AAGT AGCTAAGTAGCTAA GTAGCTAAGTAGCCC TERM 1031 866962 - 867009 + T 82 -11.7 -3.09516 | gap 2, opp_overlap 866962, overlap 866968 866976 GCCCGTATGAGCGAA GCGAAATACGGGGACAATAGATG ACAT CAT-TGTT-TTCCCGTATTTCGC TTCGCTCATACGGGC TERM 1032 869033 - 869047 + T 71 -5 -4.62054 | AGAAATAACCGATTA TGATCC CTT GGATTA TTTTAATTTGGTTCA CBUD_0883 869722 - 869120 - | aminoglycoside N6'-acetyltransferase TERM 1033 869600 - 869620 + g 73 -5.5 -4.74406 | overlap 869604 AACATGTTTTTCTTT GAACCAATT AAG AATTGTTTC TTTATATTTTTTTGT TERM 1034 869604 - 869616 + g 74 -4.9 -4.7908 | overlap 869600 TGTTTTTCTTTGAAC CAATT AAG AATTG TTTCTTTATATTTTT TERM 1035 869922 - 869905 - H 71 -7.1 -3.86194 | opp_overlap 869904 AATTCTGTTGACAAA CTATCTA TGAC TAGATAG AATTCTTAGCGTTAT CBUD_0884 869936 - 870517 + | transcriptional regulator, TetR family TERM 1036 870554 - 870537 - f 78 -7.1 -4.39696 | TTTTAAATCAAGAAA CTATCTA TTAA TAGATAG GTATAGGAGAAAAAA CBUD_0885 870574 - 871248 + | glutathione S-transferase CBUD_0886 871322 - 872653 + | leucine-rich repeat protein CBUD_0887 873854 - 872718 - | Fic family protein TERM 1037 872763 - 872777 + g 79 -3.4 -5.26875 | CCAGCGGATTTCATA GGCTGC GGA GCGACC TTTTTTGGTTAACGG TERM 1038 873664 - 873680 + g 72 -9.3 -3.14132 | TGTTCACCTTCTATG GCCGAGG TGT CCACGGC TTGATCGGCCAAGAC TERM 1039 873686 - 873718 + g 70 -5.6 -4.34737 | gap 1 TGTCCACGGCTTGAT CGGCCAAGACAAAAG CATT CATTTGTCGTG-CCG TTTGTTGATTGATAG TERM 1040 873882 - 873907 + r 100 -10.6 -5.42862 | overlap 873868 ATTGCTTCGTATTGT GAAGCGATTA TAACAT TAATCGCTTC TTTTTTTAAGCCTGT TERM 1041 874278 - 874294 + r 70 -3 -5.0095 | ATTATAAATGCTGAT CCATTT CACGA AAGTGG TTTTATTATCTTTTT sfcA 875997 - 874300 - | NAD-dependent malic enzyme TERM 1042 875097 - 875085 - G 74 -4.7 -4.77036 | opp_overlap 875085 TGCCAGCACCAAAAA CGGCG ATA CGCTG TTCTGGTAGGGTTGA purB 877410 - 876025 - | adenylosuccinate lyase TERM 1043 877730 - 877761 + G 80 -3.6 -5.40072 | overlap 877735 GCCTTAGGCGTAGGC CCGGGGGATGAGGT AATC ACCTCTTCCTTTAG TTTTTTTGCAACGGC TERM 1044 877735 - 877756 + G 93 -8.7 -4.5187 | overlap 877730 AGGCGTAGGCCCGGG GGATGAGGT AATC ACCTCTTCC TTTAGTTTTTTTGCA TERM 1045 877794 - 877808 + G 82 -7.8 -4.4773 | overlap 877795 AAACGATTGTTTTTT TGGGTG CTA CACCCG TTTTCGTTGATATCG TERM 1046 877795 - 877807 + G 71 -9.1 -3.27915 | overlap 877794 AACGATTGTTTTTTT GGGTG CTA CACCC GTTTTCGTTGATATC CBUD_0890 877514 - 878623 + | nucleotide-sugar aminotransferase rfaH 878610 - 879113 + | transcriptional activator TERM 1047 879157 - 879135 - f 70 -9.2 -3.1352 | overlap 879133 TGGTAACTCAAGATA CAGTGTTCAT GCT ATGAACGCTG ATGATAAGGACGTGG CBUD_0892 879148 - 879744 + | hypothetical protein CBUD_0893 879821 - 881374 + | NAD-dependent oxidoreductase CBUD_0894 881389 - 882384 + | NAD dependent epimerase/dehydratase family TERM 1048 883258 - 883278 + G 73 -2.5 -5.09895 | opp_overlap 883260 883263, overlap 883263 TATTAGCTGATTGCA AACATGCTT GGC AAGCTTGTG TTTTTTACGTAGATC CBUD_0895 882381 - 883535 + | perosamine synthetase asnB2 883538 - 885436 + | asparagine synthetase [glutamine-hydrolyzing] CBUD_0897 885437 - 885988 + | bacterial transferase family (hexapeptide motif) CBUD_0898 885999 - 887804 + | phospholipid-lipopolysaccharide ABC transporter CBUD_0899 887817 - 888803 + | methyltransferase CBUD_0900 888812 - 889081 + | hypothetical protein CBUD_0901 889085 - 890161 + | radical SAM superfamily protein TERM 1049 890465 - 890475 + G 71 -4 -4.8622 | TAGATTACTTTACGT TAGT TTT ACTA TTTTTAATTACAAAA TERM 1050 890951 - 890940 - g 93 -2.2 -6.15717 | TAAAGATAAAAAAAA TGAG GATT CCCA TTACAAGTCATTAAC CBUD_0902 890176 - 891660 + | hypothetical membrane spanning protein CBUD_0903 891947 - 893047 + | lipopolysaccharide N-acetylglucosaminyltransferase TERM 1051 893455 - 893469 + G 78 -5.8 -4.90381 | TATTTATTCATTGTC GATAAT AAG ATTATC TTTTCTTATATTAAA CBUD_0904 893183 - 894475 + | glycosyltransferase asnB1 894475 - 896388 + | asparagine synthetase family protein TERM 1052 896426 - 896407 - g 100 -4.4 -6.25242 | ATAATGAAAAAAAAA TTATTGAT TGTC ATCAACAA CGCAAAGTTTTTTCT CBUD_0906 896395 - 897528 + | alpha-D-QuiNAc alpha-1,3-galactosyltransferase TERM 1053 897512 - 897528 + F 73 -6.7 -4.18018 | opp_overlap 897506 897507, overlap 897507 TTTATGAAACTCTTC TTAAGAA GAT TTCTTAA TTTTAGGTGAAAAAA TERM 1054 898095 - 898083 - g 76 -7.7 -4.16016 | opp_overlap 898079 TTATGTGCTAAGAAA CTGCA TTT TGCAG TCACTCATGTGGAAG CBUD_0907 897759 - 898856 + | UDP-N-acetylglucosamine 2-epimerase CBUD_0908 898867 - 900024 + | glycosyltransferase TERM 1055 900036 - 900026 - T 74 -4 -5.05153 | ATCGGAAAAAATAAA TTTC TAA GAAA AGTATTGCAAATACC TERM 1056 900050 - 900038 - T 74 -4.9 -4.6635 | AAATTTCTAAGAAAA GTATT GCA AATAC CATTCAACAAAATTT CBUD_0909 901048 - 900029 - | UDP-N-acetylglucosamine 4-epimerase CBUD_0910 902325 - 901036 - | UDP-N-acetyl-D-galactosamine 6-dehydrogenase TERM 1057 902112 - 902099 - G 71 -3.1 -5.04175 | GCAACGATATAAAAA TCAGC TTTT GCTAA ATCGTCCGGGTCGTC TERM 1058 902927 - 902913 - g 86 -10 -3.9281 | opp_overlap 902913 AGTAGGTGTAAATAA TTCGCG TGC CGCGAA TTTGATGAAGGAACT TERM 1059 902913 - 902927 + G 80 -10 -3.72695 | opp_overlap 902913 AGTAGGTGTAAATAA TTCGCG TGC CGCGAA TTTGATGAAGGAACT ugd 902383 - 903732 + | UDP-glucose 6-dehydrogenase CBUD_0912 903746 - 904510 + | 3-hydroxyacyl CoA dehydrogenase TERM 1060 904628 - 904618 - g 88 -6.8 -5.0916 | overlap 904619 TGCGCAAGATAAAAA GCGT GGA ACGC GATTGAGTTTAGAGG pgi 904520 - 906163 + | glucose-6 phosphate 1-epimerase TERM 1061 906749 - 906736 - g 71 -4.5 -4.58395 | overlap 906737 GGTATGGTTGAAAAA CCTCC CCTC GGAAG CGCGTTGTCAGATTG galU 906160 - 907047 + | UTP--glucose-1-phosphate uridylyltransferase TERM 1062 907051 - 907065 + F 77 -5 -4.90455 | GTGGGGGGTTAATGG CAGTAA CTT TTGCTG TTTTTATAAATCTGT TERM 1063 907267 - 907291 + G 72 -7.1 -4.02315 | opp_overlap 907274 TTAATCGTTGATATG GAGCACATCCA CCT TGGATCGGCTC TTTGCGTTTTTCCTT CBUD_0915 907111 - 908160 + | hypothetical membrane spanning protein rpsO 908261 - 908530 + | SSU ribosomal protein S15P TERM 1064 908567 - 908551 - g 74 -4.5 -4.82518 | overlap 908561 AAAACATGAATAAAA TTAGAAA GAC TTTCCAA TATGGCAAACATGAA pnp 908541 - 910631 + | hypothetical protein TERM 1065 910692 - 910654 - T 81 -11.2 -3.07816 | opp_overlap 910654 TCCGTATGCAGCGAA GCGAAATACGGGAA TTGTCATTATT TCCCCGTATTTCGC TTCGCTGCATACGGG TERM 1066 910654 - 910692 + T 75 -10.5 -3.07816 | gap 1, opp_overlap 910654 TCCGTATGCAGCGAA GCGAAATACGG-GAATTG TCAT TATTTCCCCGTATTTCGC TTCGCTGCATACGGG mgsA 911199 - 910723 - | methylglyoxal synthase CBUD_0918a 911224 - 911334 + | hypothetical protein TERM 1067 912651 - 912667 + F 73 -8 -3.85698 | overlap 912653 CGCTTTGTTTATTAT CAGCCA TTGTT TGGCTG TTTCTGGCACCAGCG TERM 1068 912653 - 912692 + F 70 -3.5 -4.87626 | overlap 912651 CTTTGTTTATTATCA GCCATTGTTTGGCTGTT TCTGGC ACCAGCGGGGCAGTGGC TTTTTCATGTTACCG TERM 1069 914285 - 914263 - g 100 -11.3 -4.42788 | overlap 914265 TCGAAGCTTATAAAA TCGTCCGCC TTTAT GGCGGACAA AAATATGAAAACGAA TERM 1070 914283 - 914265 - g 79 -11.7 -2.54632 | overlap 914263 GAAGCTTATAAAATC GTCCGCC TTTAT GGCGGAC AAAAATATGAAAACG TERM 1071 914980 - 914967 - g 72 -9.5 -3.21827 | AGAAAAATTATCGAA GCCGC CCGG GCGGC ACATGCGATGGAATT msbA 913599 - 915389 + | phospholipid-lipopolysaccharide ABC transporter TERM 1072 915437 - 915451 + G 72 -6.4 -4.24741 | overlap 915434 CGTTCTTTATTAGGT GGGATT TTA AGTCCC TTCTCTTTTTTGTAT lpxK 915389 - 916366 + | tetraacyldisaccharide 4'-kinase nadE 917991 - 916363 - | glutamine-dependent NAD(+) synthetase TERM 1073 916539 - 916517 - G 79 -8.3 -4.19506 | opp_overlap 916515 916519 ATTTCAACGTCAAAA CCCCCCGCC GCAAT GGCAGTGGG GTCTTCATCTTTAGC TERM 1074 916519 - 916540 + g 74 -9.3 -3.29837 | opp_overlap 916517, overlap 916515 TTCAACGTCAAAACC CCCCGCCGC AATG GCAGTGGGG TCTTCATCTTTAGCA TERM 1075 916972 - 916986 + g 76 -7 -4.55798 | GTTGATGGTCGAGGT GCGCAC ATT GAGCGC TTTTGCTTTCCCCTC TERM 1076 918032 - 918014 - R 73 -10.3 -2.84581 | overlap 918013 TAACCTATTAATAAT GCCGCAA CCACT TTGCGGC CTTCGGACATTAGCG CBUD_0924 918369 - 917998 - | hypothetical membrane spanning protein CBUD_0925 918494 - 918955 + | hypothetical protein CBUD_0926 919043 - 920938 + | hypothetical protein CBUD_0926a 921062 - 921172 + | hypothetical protein rpsF 921159 - 921539 + | SSU ribosomal protein S6P TERM 1077 921595 - 921573 - g 74 -4.2 -5.00616 | TTTCGTCGTAAAAAA TTCTGTGCAT TTG ATGCAAAAAA TCTCCAAGAGATTGA TERM 1078 921606 - 921596 - g 81 -5.4 -5.09225 | opp_overlap 921596 ATTTGATGCAAAAAA TCTC CAA GAGA TTGATTACAAAGACG TERM 1079 921669 - 921651 - g 77 -10.2 -3.1211 | overlap 921636 GATTACATCATGGAA TCGGGGCG AGT CGTCCCGA GCCGGATTACCGGCA rpsR 921552 - 921773 + | SSU ribosomal protein S18P TERM 1080 922202 - 922192 - g 73 -5.4 -4.68593 | CTCACTATTTAAAAA CCAA TGA TTGG ACTTCGACATTTCGA CBUD_0929 921777 - 922676 + | hypothetical membrane spanning protein TERM 1081 922744 - 922718 - g 77 -3.7 -5.19328 | overlap 922721 ATTTTACAAGAAAAA GTAGCCAATTT AGGGA ACATTGGCGAC CAGGTGGTTGTAAAA rplI 922688 - 923152 + | LSU ribosomal protein L9P TERM 1082 923440 - 923426 - g 78 -4.2 -5.18355 | overlap 923428 GTCAAAAAGTAAAAA CCTCGG TAC CCAAAG TACCGCCTCATTCTC TERM 1083 923892 - 923913 + G 81 -10.9 -3.39895 | overlap 923905 923906 TCGTGTTCGCGGCTC TGGGCCGAT AGCC ATCGGTCCA TTGCTTACTAAAGCC dnaB 923401 - 925233 + | replicative DNA helicase alr 925230 - 926324 + | alanine racemase, biosynthetic TERM 1084 926441 - 926417 - g 77 -3.7 -5.1356 | TTTTATGAAGAAAAA TTTCGTTCTTT AAC AAAAAATGAAA AAGAAATTTTTAACC TERM 1085 926463 - 926479 + G 76 -9.5 -3.52204 | TTTTTAACCAATTGT TGGATCA ACC TGATCCA TTGCTTTACGACTGG CBUD_0934 926321 - 926569 + | tetratricopeptide repeat family protein CBUD_0933 927016 - 926561 - | hypothetical cytosolic protein udk 927744 - 927097 - | uridine kinase CBUD_0936 928333 - 927734 - | SMR/MUTS family protein aroC 928456 - 929514 + | chorismate synthase asd 929527 - 930549 + | aspartate-semialdehyde dehydrogenase CBUD_0941 931920 - 930814 - | molybdopterin biosynthesis MoeB protein TERM 1086 932138 - 932158 + G 76 -2.5 -5.40474 | overlap 932141 TGGGCTTCGCAAAGC TCAGCCC ACCCTAC GGGCTTA TTTTTTTGACAAAGT TERM 1087 932141 - 932155 + G 71 -4.2 -4.79949 | overlap 932138 GCTTCGCAAAGCTCA GCCC ACCCTAC GGGC TTATTTTTTTGACAA CBUD_0943 932106 - 932222 + | hypothetical protein TERM 1088 932576 - 932565 - g 81 -4.4 -5.27938 | overlap 932569 932570 ATGTTCAAACAAAAA CAAG GCTA CTTG TCGCAAGCAGAAGTG TERM 1089 932736 - 932703 - g 70 -2.6 -4.96501 | gap 3, overlap 932716 TTGCAGAAAAAGAAA TACGCCGGCAGAACCGT TTG ACGGTTC-G--GGCATA TAGGCTATTGCTCCT CBUD_0944 932336 - 933301 + | hypothetical protein TERM 1090 934198 - 934220 + G 74 -9.2 -3.34005 | opp_overlap 934202, overlap 934202 GTAAAATACGGTGGG GAAAGTTGGT GAA ACCTACTTTC TTGTCAGAGTTGATT CBUD_0945 933396 - 934781 + | hypothetical cytosolic protein CBUD_0945a 935819 - 934989 - | transposase TERM 1091 936063 - 936077 + r 90 -4.2 -5.98675 | CTATACACAAGCTCA GCCC AACCTAC GGGC TTTTTTATTTTTATC CBUD_0947 936222 - 936088 - | hypothetical protein TERM 1092 936483 - 936454 - H 71 -7.2 -3.92746 | TTTATGCTAAAAAGA CTCCTCCTTTCT ATGAAG AGGAAGGAAGAG GTAAAGCATGATCGA typP/bipA 936491 - 938299 + | GTP-binding protein CBUD_0949 938311 - 939477 + | hypothetical cytosolic protein TERM 1093 940251 - 940239 - g 77 -4.9 -5.01732 | opp_overlap 940237 940239 AAGTGTCTCAAAAAA TCAAT CGA ATTGA TGTTACTACCGCTAC TERM 1094 940389 - 940379 - g 79 -3.2 -5.30575 | CAAAAATTTAAAAAA TCCG ATG CGAA TTGGGCGCTTAATTT TERM 1095 940634 - 940619 - g 87 -5.4 -5.46698 | GGTAAAACCAAAAAA TTGCCG ATGA CGACAA AAAAGACTTTAGCAC coaBC 939509 - 940684 + | phosphopantothenate--cysteine ligase TERM 1096 940770 - 940757 - f 79 -5.3 -5.03945 | opp_overlap 940757 940767, overlap 940748 940749 TAAGAAGGACAAAAA TATCC CTTT GGATA ATTTTTATCGTTTTG CBUD_0952 940852 - 941874 + | patatin-like protein bdbC 942287 - 941844 - | disulfide bond formation protein B dsbA 942940 - 942284 - | thiol:disulfide interchange protein CBUD_0954 943623 - 942922 - | zn-dependent hydrolase, glyoxalase II family CBUD_0955 943721 - 944659 + | hypothetical exported membrane associated protein truA 944664 - 945449 + | tRNA pseudouridine synthase A TERM 1097 945932 - 945948 + G 70 -3.7 -4.85782 | AGAGGCAGCAATCAG TGAAAGG CTT CCTTTTG TTTGTTTTTCAACGA accD 945480 - 946355 + | acetyl-coenzyme A carboxylase carboxyl transferase subunit beta folC 946488 - 947738 + | dihydrofolate synthase dedD 947722 - 948339 + | cell division related protein dedE 948407 - 948961 + | colicin V production protein purF 948970 - 950490 + | amidophosphoribosyltransferase CBUD_0962 950487 - 950819 + | thyroglobulin type-1 repeat domain protein TERM 1098 950915 - 950902 - g 75 -2.4 -5.27476 | GTTAATAAAATAAAA TTCC TTACGG GGAA ACATAACCTCGAATT TERM 1099 950971 - 950941 - g 83 -9.1 -4.12043 | gap 1, opp_overlap 950945, overlap 950943 950945 GAATTAATTAAAGAA TAT-ACGCATCCGG AAAG CCGGATGCGTGATG TAGAAATCGCTTCTG TERM 1100 950968 - 950943 - g 100 -13.3 -3.63901 | opp_overlap 950945, overlap 950941 950945 ATTAATTAAAGAATA TACGCATCCGG AAAG CCGGATGCGTG ATGTAGAAATCGCTT TERM 1101 950966 - 950945 - g 100 -15.9 -3.38446 | opp_overlap 950945, overlap 950943 950941 TAATTAAAGAATATA CGCATCCGG AAAG CCGGATGCG TGATGTAGAAATCGC TERM 1102 950945 - 950966 + G 100 -15.9 -2.62983 | opp_overlap 950945 950943 950941 TAATTAAAGAATATA CGCATCCGG AAAG CCGGATGCG TGATGTAGAAATCGC CBUD_0963 950836 - 951285 + | hypothetical protein TERM 1103 951548 - 951536 - g 82 -2 -5.60993 | CTTTTTATAAAAAAA TTGT TGTGT ACAA AAAAGTTAAGATTAA CBUD_0964 951502 - 951666 + | hypothetical protein TERM 1104 951977 - 951963 - f 70 -8.6 -3.28712 | opp_overlap 951962 TGGGCGTTTGGATAA TGATCG GTG CGATCA ATTAATGAAGCAATG TERM 1105 952507 - 952497 - f 75 -5.4 -4.82128 | opp_overlap 952497 GCATCAAAGACAAAA CATC ATC GATG ATTTATTTCTTCCCA TERM 1106 952785 - 952773 - f 74 -6.3 -4.39568 | ACGGATATACCAAAA TCGAT ATC ATCGA ACGCCGCCTCCCTTT TERM 1107 953174 - 953158 - f 73 -10.1 -2.91199 | CAAGGCTTAAGTACA CCTCCCC GGT GGGAAGG CAAGTTCCCGGTCCC TERM 1108 954100 - 954090 - g 85 -4 -5.47159 | opp_overlap 954096, overlap 954095 TTCCAATAGAAAAAA TAGA GCG TCTA TTCCCAATCGAACAG CBUD_0968 953632 - 954624 + | transposase TERM 1109 955482 - 955493 + F 70 -5.8 -4.46112 | GCTGTGCTGATTTTA CGGT GAAA ACCG TTTATTTAAATCCCC TERM 1110 956693 - 956703 + F 70 -8.2 -3.65529 | opp_overlap 956693, overlap 956700 AGCCTATTTATGGAA GGGC AAC GCCC TTTACGTAGGGCTCT TERM 1111 957682 - 957704 + G 73 -5.5 -4.66163 | TGTTCCAAGGACAAC CCGGTGCTA AAAAA TGGCGTCGG TTTTTGCATGAAAAT dusA 956718 - 957779 + | NIFR3-like protein rpmE 958030 - 957791 - | LSU ribosomal protein L31P CBUD_0972 958150 - 959454 + | transporter, MFS superfamily ispZ 960598 - 960053 - | intracellular septation protein TERM 1112 960238 - 960224 - G 93 -2.8 -5.98781 | opp_overlap 960224 GAGAATTAAAAAAAA TAAAGC CCA GCTTAA ATTTAAGCGTGACCA TERM 1113 960607 - 960593 - G 76 -2.9 -5.39681 | ATAATCAAATAAAAA TTTCA TAAGG TGAAA GAGCCTCTCTTTTTT TERM 1114 960799 - 960789 - g 70 -5.4 -4.49556 | overlap 960790 GGGCTAGGAAACAAA TCAG GGG CTGA ACGCATCCGCCGACT CBUD_0976 960651 - 961265 + | Sua5/YciO/YrdC/YwlC family protein TERM 1115 961585 - 961562 - g 75 -2.4 -5.25805 | overlap 961564 AAGAAACTGAAAAAA TCGCTCGCTA TTTT CAACAAGCAA AATTACCTGTTATTA CBUD_0977 961246 - 962337 + | hypothetical membrane associated protein CBUD_0978 962482 - 962339 - | hypothetical protein CBUD_0978a 962807 - 962604 - | hypothetical protein TERM 1116 963211 - 963193 - g 71 -3 -4.95547 | overlap 963196 TGTAGAAGAAGAAAA TGAGCAAG ACC CCCGCGCA GAATTGGTACGTCGT TERM 1117 963447 - 963467 + G 79 -6.9 -4.58213 | GCGAGCCTTTATCTA TTCGCGA ACGGATG TCGCGAA TTTTATCGTTGGTTG scpA 962819 - 963646 + | segregation and condensation protein scpB 963651 - 964280 + | segregation and condensation protein CBUD_0984 964290 - 965024 + | ribosomal large subunit pseudouridine synthase B CBUD_0984a 966253 - 965222 - | hypothetical membrane spanning protein CBUD_0985 967009 - 966266 - | glycosyltransferase involved in cell wall biogenesis TERM 1118 966816 - 966830 + g 82 -2.1 -5.68489 | overlap 966823 AGGCTGGCTCCTTTC CCTTG GTTAA TAAGG TTTTTTATTATTATA mutS 969621 - 967006 - | DNA mismatch repair protein TERM 1119 968998 - 969013 + g 71 -4.7 -4.69656 | GATGGAGTCGGCTTT TAGCG GATGAA CGCTA TTTTCTTCACTGATT cinA 969755 - 970255 + | putative competence-damage protein TERM 1120 971338 - 971318 - g 70 -5.3 -4.56597 | overlap 971320 CGTTTGCGTGAAAAA CTGTTGCCG CAT CGGCAAGGG GAGAAAATCGCTGAA recA 970343 - 971374 + | RecA TERM 1121 971456 - 971446 - g 74 -6.8 -4.39318 | GAATTAAAGCGAAAA CTCG TTA CGAG AGGCTACAAGCTTCC recX 971371 - 971805 + | regulatory protein TERM 1122 972572 - 972560 - g 70 -7.7 -3.67296 | opp_overlap 972560 CAGTATTTATTGAAA GCGTT AAG AACGC TTCTTAAGACCGAGG TERM 1123 972560 - 972572 + G 70 -7.7 -3.61398 | opp_overlap 972560 CAGTATTTATTGAAA GCGTT AAG AACGC TTCTTAAGACCGAGG TERM 1124 973907 - 973917 + G 71 -6.8 -4.15044 | overlap 973888 GAGCAACAATTACGT TCGC TCA GCGA TTTATTAAAAACGAA TERM 1125 974290 - 974303 + G 70 -9.5 -2.78679 | overlap 974289 GGTTGGTGGCCGCAG CGGGG GCCG CCCCG ATTTAGCTCAAGGAG alaS 971798 - 974395 + | alanyl-tRNA synthetase lysC 974401 - 975630 + | aspartokinase csrA1 975770 - 975982 + | carbon storage regulator TERM 1126 975988 - 976010 + T 93 -11.3 -4.44974 | gap 1, opp_overlap 975983, overlap 976009 ATTTGAATAACCTTA CCCCGC-CGT ACGT ACGCGCGGGG TTTTGTAACCTTTCC TERM 1127 976450 - 976482 + T 85 -8.4 -4.4595 | gap 1, overlap 976451 AAAAATGCCCGTTTT CCGTCATCCCGCAGC TTGA GC-GCAGGATGACGA TTTTACATTTTGTCC TERM 1128 976451 - 976481 + T 83 -11.9 -3.26486 | gap 1, overlap 976450 AAAATGCCCGTTTTC CGTCATCCCGCAGC TTGA GC-GCAGGATGACG ATTTTACATTTTGTC TERM 1129 977330 - 977340 + T 70 -5.4 -4.43477 | CATTTTCTTTTTGCA GCAT CGG ATGC TTTTGCTTCCCTACG TERM 1130 977881 - 977869 - T 70 -9.1 -3.18366 | opp_overlap 977868 977867 977869, overlap 977849 977867 977865 GTGCCAATTAACACA GGCCA GAT TGGCC CATTTCTTATTATCG CBUD_0996 980826 - 979045 - | hypothetical membrane associated protein TERM 1131 980083 - 980094 + g 71 -2.2 -5.1287 | TCGATCGTTTAATCC TTGG GTTT CCAG TTTTTTCCATCTCAC TERM 1132 980780 - 980765 - G 79 -3.2 -5.40072 | overlap 980766 980777 GCTTGCCTAAAAAAA TCCCGT ATCA AAGGGA CGGGGTCGCGAGGGT CBUD_0996a 980975 - 981088 + | hypothetical protein CBUD_0997 982906 - 981158 - | hypothetical protein gacA.3 983614 - 984258 + | response regulator CBUD_0999 984702 - 984301 - | hypothetical membrane spanning protein CBUD_1000 984665 - 984850 + | hypothetical protein cyoA 984822 - 985754 + | cytochrome c oxidase polypeptide II TERM 1133 986663 - 986677 + G 70 -5.6 -4.37886 | overlap 986664 986676 TTTATATTTTAATTT TGCCGG CTT TCGGCG TTTTCTCAGAAGTCG TERM 1134 986919 - 986945 + G 75 -5.8 -4.59993 | GGGCAAAATTATTAT GCGAACGCCGAT GTT ATGGGTATTCGC TTTCTTTATCACTTT cyoB 985774 - 987780 + | cytochrome c oxidase polypeptide I cyoC 987777 - 988373 + | cytochrome c oxidase polypeptide III cyoD 988370 - 988705 + | cytochrome O ubiquinol oxidase protein TERM 1135 988841 - 988888 + T 72 -9.5 -3.09516 | gap 2, opp_overlap 988841 GCCCGTATGAGCGAA GCGAAATACGGGGACGATAGATG ACAT CAT-TGTT-TTCCCGTATTTCGC TTCGCTCATACGGGC CBUD_1006 992279 - 989157 - | acriflavin resistance plasma membrane protein TERM 1136 989351 - 989300 - G 79 -6.7 -4.62085 | gap 3, opp_overlap 989302 989318, overlap 989302 989303 ATTGTGAAAAAACAA GACCGCCGACGATAGAAATCC-CCAA TCC TTGGCGGGTTTCC-CCGCCGGCG-CC GACGCCCAATGCAAT TERM 1137 989350 - 989302 - G 77 -8.2 -3.91465 | opp_overlap 989302 989318, overlap 989300 989303 TGTGAAAAAACAAGA CCGCCGACGATAGAAATCC-CCAA TCC TTGGCGGGTTTCC-CCGCCGGCGC CGACGCCCAATGCAA TERM 1138 989349 - 989303 - G 83 -11.7 -2.93795 | opp_overlap 989302 989318, overlap 989302 989300 GTGAAAAAACAAGAC CGCCGACGATAGAAATCC-CCAA TCC TTGGCGGGTTTCC-CCGCCGGCG CCGACGCCCAATGCA TERM 1139 992340 - 992371 + H 71 -6.6 -4.11751 | opp_overlap 992340 992348, overlap 992343 TTATCCTGAAGATTA GGAGGGAATAACGT CGCG ACGTTATCACCTTC TTTTAAACCATTGCT slyA 993489 - 993929 + | transcriptional regulator, MarR family CBUD_1009 994130 - 993963 - | hypothetical protein TERM 1140 994075 - 994091 + g 78 -10.1 -3.52079 | TCTGGTCTGGGTCTT CGGCGTC TAT GATGCCG TTCTCTAAAGTCTTC CBUD_1010 994862 - 994248 - | nicotinamidase CBUD_1011 996265 - 994859 - | nicotinate phosphoribosyltransferase TERM 1141 995018 - 995032 + g 72 -7.1 -4.00407 | overlap 995022 TTCCAACGGCTTTTT CGCCT CAAAA AGGCG TTTGCCTTTTTCCAT TERM 1142 995793 - 995752 - G 70 -7.9 -3.66772 | gap 1, overlap 995754 CGAAACCGCCAATAA CAGCAGCGCGGCTGGCATAG TAG CT-TGCAAGCCCCGCGGCTC TACGAAATCCAAAAT TERM 1143 995791 - 995754 - G 80 -10.5 -3.409 | gap 1, overlap 995752 AAACCGCCAATAACA GCAGCGCGGCTGGCATAG TAG CT-TGCAAGCCCCGCGGC TCTACGAAATCCAAA TERM 1144 996423 - 996435 + G 74 -4.8 -4.77925 | overlap 996432 ACATTTGTGCGTTTA TCGG CTATC CCGA TTTTTGGAATTTTTT pgsA 996312 - 996947 + | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase TERM 1145 997007 - 996991 - T 70 -9.5 -2.62616 | overlap 996994 TCAGCTGGTAGAGCA CAACCTT GCC AAGGTTG GGGTCGCGAGTTCGA CBUD_1014 998020 - 997139 - | hypothetical cytosolic protein TERM 1146 997759 - 997746 - G 75 -2.4 -5.40474 | ATTTTGTCAAAAAAA GTCA AAAGGG TGAC GGTGCTTACATCCTC CBUD_1015 998439 - 997999 - | lysozyme TERM 1147 998245 - 998259 + g 74 -10 -3.19442 | opp_overlap 998242 TTCGTGAAGTGATAG CGCCTT ATC AAGGCG TTCGATGTCTTGCAT CBUD_1016 998775 - 1000274 + | non-ribosomal peptide synthetase module-containing protein CBUD_1017 1000285 - 1001187 + | hypothetical protein CBUD_1018 1002594 - 1001203 - | ATPase TERM 1148 1001320 - 1001335 + g 100 -11.8 -4.33808 | AACGCTTTGACGAGG GCGGCC GGGT GGCCGC TTTTGAATTGGTTTG TERM 1149 1001639 - 1001652 + g 95 -8.1 -4.93696 | CTAAAAGTTTGCGCC GCGGT TTTT ACCGC TTTTTGATCTTTAGG TERM 1150 1001853 - 1001841 - G 84 -6.3 -4.99947 | CGGAATTAAATAAAA GATGA GCT TCATC AAAAAAGAAGATTAA TERM 1151 1002446 - 1002435 - G 81 -7.2 -4.60487 | opp_overlap 1002434 1002435 CATCAGTTGTAAAAA CGGG CACC CCCG CTTTTGAAAACTGTT TERM 1152 1002655 - 1002668 + H 70 -9.5 -2.74144 | opp_overlap 1002626, overlap 1002654 CAACGTCATTTTTAC GGCGC TGTC GCGCC ATTTGGCGCTGCCCC CBUD_1019 1003099 - 1005675 + | ankyrin repeat protein CBUD_1019a 1006022 - 1005717 - | hypothetical protein CBUD_1020 1006975 - 1006028 - | quinone oxidoreductase CBUD_1021 1008068 - 1007769 - | nucleotidyltransferase TERM 1153 1008585 - 1008564 - H 72 -8.7 -3.44552 | opp_overlap 1008563, overlap 1008562 ATTGCATGAATAATA GGGCCATGC CTTT ACATAGCCC ATGTGCTATTGGACC CBUD_1023 1008662 - 1008913 + | hypothetical protein CBUD_1024 1009165 - 1009383 + | hypothetical protein TERM 1154 1009659 - 1009642 - T 79 -3.5 -5.44119 | overlap 1009644 GCTAGTTGAAAAAAA CATAGTA TTAG TACTATA TAAAGCTGAAAAAAA TERM 1155 1009876 - 1009934 + T 100 -27.2 -3.12663 | overlap 1009877 CTATTCAAAAAGGGG GGGCACTCGTTAGTTGTCAAGTTACT CTACCTT AGTAACTTGACAACTAACGAGCGTCC CTTTTCCCTGATAAT TERM 1156 1009877 - 1009935 + T 100 -16.5 -4.2231 | gap 2, overlap 1009876 TATTCAAAAAGGGGG GG--CACTCGTTAGTTGTCAAGTTACT CTACCTT AGTAACTTGACAACTAACGAGCGTCCC TTTTCCCTGATAATT CBUD_1026 1011100 - 1009958 - | hypothetical ATPase TERM 1157 1011124 - 1011162 + r 74 -4.9 -4.66264 | opp_overlap 1011147, overlap 1011147 CTCTCTACTCCCATA TCTTTGTATTTTAAA CCTAAAAAC TCTAAAATACAAAGA TTTTTAGAGGTTTTA TERM 1158 1011171 - 1011147 - R 72 -4.3 -4.81249 | opp_overlap 1011124 1011147, overlap 1011163 1011164 TTTTAAACCTAAAAA CTCTAAAATAC AAA GATTTTTAGAG GTTTTAACTCTAAAA TERM 1159 1011206 - 1011230 + r 87 -8.6 -4.60746 | opp_overlap 1011211 GCGTAATTGCTGTAA CCTAAGGGAT CAAAA ATCCCTCAGG TTTTGCTGTTTTTCG CBUD_1027 1011367 - 1011215 - | hypothetical protein TERM 1160 1011311 - 1011324 + g 82 -8.1 -4.56775 | opp_overlap 1011311 1011310 GGAGCTCCCGTAAAG TCCCG CAAA CGGGA TTTTTAGACACGCAT CBUD_1028 1012211 - 1011666 - | hypothetical cytosolic protein TERM 1161 1012326 - 1012344 + r 73 -7.4 -4.10855 | opp_overlap 1012326, overlap 1012329 ACTGTATCTTTAATA CTTTGTGG AAC CCACATAG TTTTACAACAATTTT TERM 1162 1012668 - 1012658 - R 76 -3.2 -5.22312 | ATCCATATTAAAAAA GAAG AAA CCTC ATCTTCATTCAAACT TERM 1163 1012692 - 1012702 + r 89 -6.8 -5.28166 | TCAAACTTGAGCTTT TGGC TTC GCCA TTTTTATTAATTTTA CBUD_1029 1012871 - 1012677 - | hypothetical membrane associated protein TERM 1164 1013941 - 1013981 + H 95 -6.3 -5.58074 | opp_overlap 1013962, overlap 1013944 1013947 TGGTTCTCCTTAAGC GTATTTGATGATTCGATTA AAT TAAATGAATCATCTAATTC TTTTTTTAATGCTTC TERM 1165 1013944 - 1013978 + H 84 -6.6 -4.8487 | opp_overlap 1013962, overlap 1013941 1013947 TTCTCCTTAAGCGTA TTTGATGATTCGATTA AAT TAAATGAATCATCTAA TTCTTTTTTTAATGC TERM 1166 1013947 - 1013975 + H 70 -8.3 -3.28715 | opp_overlap 1013962, overlap 1013944 1013941 TCCTTAAGCGTATTT GATGATTCGATTA AAT TAAATGAATCATC TAATTCTTTTTTTAA TERM 1167 1014368 - 1014382 + H 70 -5.6 -4.47007 | overlap 1014365 1014370 CGAAATATGTTTTTA TCGGCC GGG GGCCAA TTATTTTCATTTTTC TERM 1168 1017508 - 1017519 + G 90 -5.8 -5.5454 | AAACAATGTGTTATC CAGG CGAG CCTG TTTTTGTTTCTTTAC CBUD_1036 1016289 - 1017701 + | lignostilbene-alpha,beta-dioxygenase TERM 1169 1017740 - 1017704 - T 100 -24.7 -4.99043 | opp_overlap 1017716 GTTTTACAAATAAAA CGTAGCGAAATACGGGA ATT TCCCGTATTCCGCTACG CTCCATACGGGCTAC CBUD_1037 1018066 - 1017752 - | hypothetical protein TERM 1170 1018099 - 1018086 - R 80 -8.1 -4.4078 | GCCTCCCAATTAAAA CGCCT AACC AGGCG CCTGCAATACAAAGA crcB 1018437 - 1018063 - | CrcB family protein TERM 1171 1018214 - 1018202 - G 74 -7.7 -4.05816 | GAAAATGACGAGAAA GTGGT ATA ACCAC CCAAGAAGCCAATTA bioA 1019766 - 1018438 - | adenosylmethionine-8-amino-7-oxononanoate aminotransferase TERM 1172 1018728 - 1018745 + g 85 -4.1 -5.4505 | opp_overlap 1018730 TGAATTTGCCCAATT TATGAGC TCGT GCACATA TTTTTTCTTCAGAAA TERM 1173 1018961 - 1018976 + g 83 -9 -4.11216 | GGAATAATTCCGGCA TGCTCG CACG CGAGCA TTTTCCCCGTGCGGC TERM 1174 1019653 - 1019664 + g 71 -2.2 -5.1861 | GCTGAGTTCAATATA GCTT CCAT AGGC TTTTTTAATAATAAG TERM 1175 1019959 - 1019975 + H 79 -11.5 -2.52896 | GCGCACACGTGCGCA GCGCGCC GAA GGCGTGC TAGATTCCCGCCTGC TERM 1176 1020294 - 1020280 - g 70 -5.7 -4.30576 | TTTCCAGTATTAAAA CAGGA ACGTG TCCTG AAGATTGCGCCTATT bioB 1020135 - 1021100 + | biotin synthase TERM 1177 1021220 - 1021194 - g 71 -6.6 -4.1891 | GTGGGTCAATATAAA CTGCAGAGATTG TAT CAATTTCTGTAG CAACGATTATTTAGG TERM 1178 1021546 - 1021560 + G 85 -7.2 -4.87807 | opp_overlap 1021546 1021545, overlap 1021537 TATCCACATCAAAAT TTTGAG CAA CTCAAA TTTTTAATGTCTTCC TERM 1179 1021791 - 1021781 - g 73 -8.2 -3.61398 | TCCCTTGTTTAATAA CCCC TTT GGGG AAAGCGTTTGGTTGT bioF 1021087 - 1022241 + | 8-amino-7-oxononanoate synthase bioH 1022235 - 1022939 + | carboxylesterase bioC.1 1022929 - 1023675 + | biotin synthesis protein birA 1025299 - 1024328 - | biotin operon repressor bioD 1023672 - 1024400 + | dethiobiotin synthetase TERM 1180 1024992 - 1025004 + gF 70 -9.1 -3.12663 | overlap 1024991 ATGTTTAGTTGTTGA GGGTG GTT CACCC GTTTTAAATACTCGT TERM 1181 1025225 - 1025247 + gF 72 -9.8 -2.90075 | overlap 1025238 CAAGGCCTGGCCGAT GGCGGTTCCG GGG TGGAAGCGCC TGTCATTGAGAAGCG TERM 1182 1025958 - 1025948 - g 73 -8.2 -3.65135 | opp_overlap 1025948 1025947 1025953 1025956 CGCAAACAACGACAA CCCC TTT GGGG ATTTTCCCTCAATTT TERM 1183 1026187 - 1026200 + G 75 -2.4 -5.40474 | GTAACGAATTGGACA GAAC AATTTG GTTC TTTTTTTAAAGCCAT lolC 1025422 - 1026666 + | lipoprotein releasing system transmembrane protein TERM 1184 1027046 - 1027066 + G 73 -9.7 -3.06183 | opp_overlap 1027041, overlap 1027051 AGACAAAAAGCCTCG GCCTACCTT GAA AAGGTTGGC TTAAGTCACCGTCAA TERM 1185 1027140 - 1027120 - g 77 -10.4 -3.1733 | gap 1, opp_overlap 1027120, overlap 1027118 1027117 CGGTGGAGAAAAGCA GCGCGTCGC TTTA GCG-CGCGC TTTAGTAACCGAGCC TERM 1186 1027120 - 1027140 + G 82 -10.4 -3.72576 | gap 1, opp_overlap 1027118 1027117 1027120 CGGTGGAGAAAAGCA GCGCGTCGC TTTA GCG-CGCGC TTTAGTAACCGAGCC lolD 1026659 - 1027360 + | lipoprotein releasing system ATP-binding protein TERM 1187 1027793 - 1027765 - g 74 -6.6 -4.4078 | overlap 1027767 CTGGCTCAATTAAAA CACCTCAGCACC CGGCT GGTGCGAGGGTG GGGCCACTTAGAGCG TERM 1188 1027790 - 1027767 - g 78 -8.9 -3.8125 | gap 1, overlap 1027765 GGCTCAATTAAAACA CCTCAGCACC CGGCT GGTGC-GAGG GTGGGGCCACTTAGA hflX 1027357 - 1028721 + | GTP-binding protein TERM 1189 1029343 - 1029333 - g 91 -6.8 -5.42198 | opp_overlap 1029333 CGTGAAAAAATAAAA CCGA TGA TCGG TGATGTTTCAGCACT TERM 1190 1029941 - 1029915 - g 70 -5.8 -4.24404 | overlap 1029919 AGCGAAATGCCAAAA GAAGCGCGCAAT TAT ATTTCGCGACTC GAAGAACTCTTGGGA purA 1028742 - 1030049 + | adenylosuccinate synthetase CBUD_1050 1030198 - 1030082 - | hypothetical protein cyoE 1031124 - 1030207 - | protoheme IX farnesyltransferase TERM 1191 1030450 - 1030424 - G 75 -2.2 -5.28315 | overlap 1030429 ACAAAAGGTAAAAAA CTAATCGCTGTT AAT AATAGCGTATAG AGTAGGATATTAATT CBUD_1052 1031405 - 1031121 - | cytochrome c oxidase polypeptide II CBUD_1052a 1031545 - 1031652 + | hypothetical protein def1 1032235 - 1031723 - | peptide deformylase TERM 1192 1032957 - 1032978 + G 70 -9.5 -2.74523 | opp_overlap 1032957, overlap 1032954 ATAATTATCAAGGAA CTCACATGA TTAA TCGTGTGAG TAGTATTGCGAATCA TERM 1193 1033331 - 1033344 + G 70 -2.5 -4.99043 | GGACACAGCGATACT TATTT TTTA AAATA TTTTATTTGTGACGA TERM 1194 1033416 - 1033404 - g 80 -4.9 -5.08824 | CCTTCATTGAAAAAA TCTTT TTT AAAGA ATTAAGAAAACAAGG CBUD_1055 1032464 - 1035637 + | hypothetical cytosolic protein CBUD_1055a 1035881 - 1035639 - | uracil-DNA glycosylase TERM 1195 1036775 - 1036764 - g 78 -4.4 -5.16681 | overlap 1036769 GGAAAAAGAAGAAAA GAGA GCGG TCTC TGAGACTGAGACTCA TERM 1196 1038355 - 1038342 - g 85 -2.4 -5.86976 | TGATAAAATAAAAAA TCTG TTTTTT CAGA AAGATACCTTATATA CBUD_1057 1035970 - 1038384 + | hypothetical cytosolic protein TERM 1197 1038909 - 1038926 + G 81 -4.1 -5.38549 | overlap 1038911 AGGGAAGTAAAATGT GTCGTTT ACTC AAACGCC TTTTTCTTATTTAGG CBUD_1059 1038393 - 1039163 + | hypothetical protein ung 1039832 - 1039155 - | uracil-DNA glycosylase TERM 1198 1039511 - 1039501 - G 71 -6.8 -4.1552 | CATTTTTCTAAGAAA CCGT GGG ACGG GATTGAAACACCCAG TERM 1199 1039706 - 1039727 + g 80 -8.7 -3.96481 | AAATATCTTTTTGCG GCGGGTAAA TAAT TTTTCCCGC TTTGCGTTCTTTTTT CBUD_1060 1040633 - 1039836 - | rare lipoprotein A TERM 1200 1040159 - 1040177 + g 82 -6 -5.00616 | CAACGAGGGCCGTTC CTCGATTA ACG TAACCGAG TTTTTTAGCAGCGGC TERM 1201 1041012 - 1041002 - g 80 -4.6 -5.16237 | opp_overlap 1041003, overlap 1040977 1041003 AAGTTTATTAAAAAA GCGC GAA ACGC CGGCTTTGTTATTAA CBUD_1061 1040667 - 1041479 + | 23S rRNA Gm2251 methyltransferase TERM 1202 1041475 - 1041521 + T 100 -21.1 -5.34055 | gap 1, overlap 1041483 AAGCCCCTGCGCCCT CTTAAGTCCCCGTCATCCCCGC CTGC GCGGGGATGAC-GGGTTTTAAG TTTTTTAGTCTTTAT TERM 1203 1041483 - 1041514 + T 100 -26 -4.5366 | overlap 1041475 GCGCCCTCTTAAGTC CCCGTCATCCCCGC CTGC GCGGGGATGACGGG TTTTAAGTTTTTTAG CBUD_1062 1042294 - 1041536 - | hypothetical cytosolic protein TERM 1204 1041792 - 1041803 + g 81 -4.4 -5.26875 | AAGGGAATATTAAGG TCGA TAAA TCGA TTTTTTAATTCCGAG TERM 1205 1042362 - 1042318 - R 100 -12.3 -5.18726 | gap 1 CCTCGACAATAAAAA TTTCCCTAGCGCTCCTTCGC TTGTTC GCGA-GAAGCGTCAGGGAAA TGGGACAGTTTAGTA CBUD_1063 1043099 - 1042323 - | prephenate dehydrogenase TERM 1206 1042643 - 1042665 + g 75 -5.8 -4.59853 | opp_overlap 1042657 TCATTTCTAAGATTT TTATTTTTTT AGA AGAAAAATAA TTTTTCCAGAATTCA CBUD_1066 1045029 - 1043947 - | 3-deoxy-7-phosphoheptulonate synthase TERM 1207 1044889 - 1044875 - G 70 -5.6 -4.27441 | AGGACTACTAACAAA CGGTCA TCT TGGCCG TGAATGATGTCTCTG CBUD_1066a 1045190 - 1045098 - | hypothetical protein TERM 1208 1045281 - 1045302 + H 84 -2.4 -5.73563 | TTATTAAGGAAATGC TATTCTTT AGTAGA AAGGAATA TTTTTTTCATTTGAT CBUD_1067 1045333 - 1045611 + | lipoprotein CBUD_1068 1045700 - 1046002 + | lipoprotein CBUD_1069 1046500 - 1046033 - | hypothetical membrane associated protein CBUD_1070 1048536 - 1046551 - | methylcrotonyl-CoA carboxylase biotin-containing subunit TERM 1209 1047103 - 1047117 + g 70 -2.8 -4.99643 | overlap 1047105 GTCGTCGGATTGAGT GGCAAA TTC TTTGGC TTGTTTTTTTTGCTG TERM 1210 1048045 - 1048062 + g 73 -8.3 -3.72576 | ACGCATTCCTTTTCC GCCACCG CCAG CGGAGGC TTTGATAAGAAGCGG CBUD_1071 1049308 - 1048538 - | methylglutaconyl-CoA hydratase TERM 1211 1049152 - 1049162 + g 74 -4 -5.05116 | CGGCTTTAATTATTA TAAC CCG GTTA TTTTCTTCTTTGTCG CBUD_1072 1050992 - 1049328 - | methylcrotonyl-CoA carboxylase carboxyl transferase subunit TERM 1212 1049554 - 1049580 + g 70 -7.3 -3.85704 | CCTTGGCGCTCCATT TGATCTCGCTT CACTT GAGCGAGAACA TTTGCTGCTTGCTCC TERM 1213 1050250 - 1050275 + g 80 -9.7 -3.64703 | gap 1, opp_overlap 1050227 1050230, overlap 1050230 1050230 CCGCCCAATTCTTCG GCGG-TGACGGT TTC ACCGACAGCCGC TTTGACTAACGGAGG TERM 1214 1050911 - 1050925 + g 71 -4.4 -4.7657 | CTTCGTTAGCCGTTT TTATTT TGG AAATAA TTTTTGGCATTTTTA CBUD_1073 1052201 - 1051017 - | acetyl-CoA acetyltransferase TERM 1215 1051281 - 1051291 + g 93 -4 -5.88471 | ATCCACGGCTTCTTT TTTC CAA GAAA TTTTTTTTAATAATC TERM 1216 1051605 - 1051620 + g 70 -5.4 -4.48175 | gap 1 TATCGGGACTATTTC CGG-AGC GAA GCTGCCG TTTTCGTTGGCTTTT CBUD_1074 1053364 - 1052201 - | isovaleryl-CoA dehydrogenase TERM 1217 1052817 - 1052805 - G 76 -2.6 -5.26875 | TTTTCAATTAAAAAA GCAG TAATG CCGC GAGAACCCGCTCCGG TERM 1218 1052824 - 1052838 + g 75 -5.6 -4.65895 | opp_overlap 1052823 1052824, overlap 1052822 1052820 1052819 TAATGCCGCGAGAAC CCGCTC CGG GATCGG TTTTTGCATAAACGA TERM 1219 1053815 - 1053847 + G 80 -9.9 -3.5936 | overlap 1053816 1053818 GACGGATTATTCGCA AGGGCGACTTGAAAA TCG TTATCAAGTCGCTCA TTTACCGCATTTGCC TERM 1220 1053816 - 1053846 + G 93 -13.4 -2.75294 | overlap 1053815 1053818 ACGGATTATTCGCAA GGGCGACTTGAAAA TCG TTATCAAGTCGCTC ATTTACCGCATTTGC TERM 1221 1053818 - 1053844 + G 93 -12.4 -2.91888 | overlap 1053816 1053815 GGATTATTCGCAAGG GCGACTTGAAAA TCG TTATCAAGTCGC TCATTTACCGCATTT CBUD_1075 1053453 - 1054145 + | hypothetical cytosolic protein TERM 1222 1054941 - 1054952 + G 81 -7.2 -4.63184 | AAGCGGGGGGACTCA GCGG CAAA CCGC TTTTTCCAATGACTT TERM 1223 1055145 - 1055181 + G 93 -12.4 -3.16177 | overlap 1055149 AAAATATCGTGGAAT TTTTGACCCTCTCTCG CCAGA CGAGAGAGGGTATAAA TTAGGTGTATCCGAT TERM 1224 1055149 - 1055177 + G 90 -13.2 -2.56571 | overlap 1055145 TATCGTGGAATTTTT GACCCTCTCTCG CCAGA CGAGAGAGGGTA TAAATTAGGTGTATC pyrD 1054142 - 1055185 + | dihydroorotate dehydrogenase CBUD_1076 1056237 - 1055182 - | hypothetical exported membrane spanning protein CBUD_1079 1056355 - 1056885 + | phospholipase D ybgT 1057118 - 1057014 - | YbgT protein cydB1 1058262 - 1057129 - | cytochrome d ubiquinol oxidase subunit II TERM 1225 1057651 - 1057638 - G 73 -5.2 -4.63179 | opp_overlap 1057648, overlap 1057640 AAAGAATAACTAAAA GCGG CATGAT CCGC GCCATAATCAATGCG TERM 1226 1058047 - 1058036 - G 78 -7.2 -4.52857 | overlap 1058038 ACGGCGTACAGAAAA GGCC AGGC GGCC AATAAAACCCCGCCG TERM 1227 1058174 - 1058162 - G 74 -6.9 -4.36372 | overlap 1058163 AAAAAAGGTAATAAA CCGGC AGC GCCGA GATCGAATCCATCCA TERM 1228 1058266 - 1058276 + r 86 -4.6 -5.46657 | GTATTCAATCATGCT GTGG ACT CCGC TTTTTTATTGGGGTC cydA1 1059824 - 1058259 - | cytochrome d ubiquinol oxidase subunit I TERM 1229 1058469 - 1058443 - G 74 -4.4 -5.03145 | GAAGTGCCTAAAAAA GTGGGCAGCA TTCCCTC CACTACCCAC GGCTGTCTGCCATGT CBUD_1083 1060033 - 1059821 - | hypothetical protein CBUD_1084 1061205 - 1060294 - | hypothetical protein CBUD_1085 1061209 - 1061733 + | thioredoxin peroxidase TERM 1230 1061869 - 1061841 - g 82 -4.6 -5.29782 | TACAGGGATAAAAAA GCTTCTAATTCA CTTTT TGAATTGGCAGC AGAAAAAAAGCAATC TERM 1231 1062136 - 1062126 - g 93 -2.6 -6.04378 | overlap 1062130 AAATCAGAAAAAAAA TTAA TCA TTAA TATGAGTAGCGAGAT CBUD_1086 1061733 - 1062431 + | short chain dehydrogenase CBUD_1087 1062612 - 1062442 - | hypothetical protein CBUD_1088 1063176 - 1062625 - | transcriptional regulator TERM 1232 1063384 - 1063394 + G 74 -4.6 -4.78597 | CAACGCTATTGGTAT GCGG CTA TCGC TTTATTTATTGTTCC CBUD_1089 1063321 - 1064550 + | multidrug resistance transporter, Bcr family TERM 1233 1067035 - 1067065 + T 70 -2.5 -5.09521 | gap 1, opp_overlap 1067034, overlap 1067036 1067037 AAAATTCAATTTAAC T-CGGAGGAGCAGC TATT GTTGCGCCTCCATA TTTTTCATTTATTAC TERM 1234 1067036 - 1067063 + T 76 -7.6 -4.15237 | opp_overlap 1067034, overlap 1067035 1067037 AAATTCAATTTAACT CGGAGGAGCAGC TATT GTTGCGCCTCCA TATTTTTCATTTATT TERM 1235 1067037 - 1067062 + T 78 -11.1 -3.06702 | opp_overlap 1067034, overlap 1067036 1067035 AATTCAATTTAACTC GGAGGAGCAGC TATT GTTGCGCCTCC ATATTTTTCATTTAT TERM 1236 1067903 - 1067876 - T 100 -7.8 -6.21477 | opp_overlap 1067876 AATATCAAAAAAAAA TACGGTCGAA TTGAGCGT CTCGACCGTA TTTTAAAAGCAGAAA TERM 1237 1067876 - 1067903 + T 73 -7.1 -4.07568 | opp_overlap 1067876 AATATCAAAAAAAAA TACGGTCGA ATTGAGCGTC TCGACCGTA TTTTAAAAGCAGAAA CBUD_1090 1069756 - 1068512 - | hypothetical protein TERM 1238 1069597 - 1069612 + g 82 -3.2 -5.43621 | GGTTGATCGATGGTT GAAACC CAAA GGTTAC TTTTTTCTCGTTTGT TERM 1239 1070372 - 1070382 + G 70 -2.6 -4.93296 | opp_overlap 1070367, overlap 1070367 AATAGCAATAGATTT TTAA TCT TTAA TTTTTCTGATGCTGG TERM 1240 1070542 - 1070527 - g 77 -4.6 -4.94222 | AATAAGCCATAAAAA CCAAGC GCTG GCCCGG AAAATTATTGAGACT TERM 1241 1070604 - 1070594 - g 76 -2.6 -5.3671 | overlap 1070587 AACAGAAGTAAAAAA TTTA ATC TAAA GGTGCGTTTTAAAGG CBUD_1092 1069952 - 1070623 + | hypothetical membrane associated protein TERM 1242 1071085 - 1071073 - g 74 -4.8 -4.91109 | GTTTTATCACAAAAA GCAG TGATT CTGC GGAATTAGAACGAGC gacA.4 1070760 - 1071413 + | response regulator TERM 1243 1071782 - 1071767 - g 80 -4.8 -5.24551 | GGAAACGAAGAAAAA TTCAAA TATA TTTGAA CGCCAATGCCTTTCC nudC 1071432 - 1072214 + | phosphohydrolase (MutT/nudix family protein) TERM 1244 1072559 - 1072572 + G 76 -9.5 -3.41359 | opp_overlap 1072554, overlap 1072557 GCAAAAATAGCCTCA GCCGC AACG GCGGC TCTTGGTTTTGCCGG TERM 1245 1073248 - 1073234 - g 81 -4.2 -5.40474 | overlap 1073237 1073238 1073241 ACGCTTTCAAAAAAA CAACGG ACG CCATCG GCGGCGATACTAGGG CBUD_1095 1072217 - 1073542 + | amino acid permease TERM 1246 1074071 - 1074060 - g 71 -3 -4.91511 | opp_overlap 1074069 1074070 AGTTTAGTAGAAAAA GAAA AAGC TTTC GCTGAGCTGCGCCAG CBUD_1096 1073631 - 1074314 + | hypothetical protein TERM 1247 1074647 - 1074667 + G 82 -7.6 -4.56597 | gap 1 TGTTGATCGGTTTTT GTGGAG-GC GGTG GCACTCCAC TTTTTAGCGCGAACG cas1_1 1074532 - 1075371 + | hypothetical cytosolic protein TERM 1248 1075711 - 1075728 + F 79 -5.5 -4.86773 | overlap 1075713 ATGGCATTCAAATTT TAGCAGC CATT GCTGCTC TTTTTCATGATTTTG TERM 1249 1075713 - 1075726 + F 75 -8.1 -4.02953 | overlap 1075711 GGCATTCAAATTTTA GCAGC CATT GCTGC TCTTTTTCATGATTT TERM 1250 1078904 - 1078888 - gf 73 -7.3 -4.07675 | GTAAAATTAACGAAA TTGCCAC CCA GTGACAA AAAACGTCAGCAAAT TERM 1251 1079560 - 1079544 - gf 73 -5.9 -4.51799 | overlap 1079546 ATCAAAGCCACAAAA TATTTCC CAA GGAAACA GTGATCGAAAGGGTA csy1_1 1078672 - 1080081 + | hypothetical cytosolic protein csy2_1 1080030 - 1081049 + | hypothetical protein TERM 1252 1081485 - 1081497 + G 73 -2.6 -5.24129 | GTTATGCTCATAATC TGGC AAATG GCCG TTTTTTATGGCGCAA csy3_1 1081061 - 1082122 + | hypothetical cytosolic protein csy4_1 1082119 - 1082694 + | hypothetical cytosolic protein CBUD_1102a 1082836 - 1082738 - | hypothetical protein CBUD_1102b 1083361 - 1083681 + | hypothetical protein CBUD_1105 1083750 - 1084214 + | hypothetical protein TERM 1253 1084961 - 1084944 - f 70 -2.7 -5.06103 | ACAATCGTCAAAAAA TTGCCTA ATTC TATGCAA AAGCAAGTCATTCCC TERM 1254 1086438 - 1086448 + F 73 -5.4 -4.56367 | opp_overlap 1086438, overlap 1086434 TAAAATTTCATTAAA GCTA GAA TAGC TTTGTTTATAGAATA TERM 1255 1086707 - 1086717 + F 70 -3.2 -4.8487 | TTATATCATAAAATA CTTC TAT GGAG TTATTTTTTTAATAC CBUD_1108 1086765 - 1088987 + | ankyrin repeat protein CBUD_1109 1089018 - 1089401 + | hypothetical protein CBUD_1110 1089401 - 1089979 + | hypothetical protein CBUD_1111 1090359 - 1090042 - | hypothetical protein TERM 1256 1090211 - 1090222 + gF 71 -3 -5.00196 | opp_overlap 1090211 AGGGGAATAAAAGCA TCAA AGCC TTGA TTTTCTTCTTTACCC CBUD_1112 1090343 - 1092019 + | hypothetical membrane associated protein TERM 1257 1093118 - 1093101 - g 88 -9.9 -4.10657 | opp_overlap 1093100 1093099 TTATATTGTTGAAAA CGACGAA AAAT TTCGTCG AACTTTTGATTTCCG CBUD_1113 1092118 - 1093371 + | hypothetical protein CBUD_1114 1094154 - 1093543 - | hypothetical protein CBUD_1115 1094380 - 1094147 - | transcriptional regulator, Cro/CI family TERM 1258 1094219 - 1094203 - G 70 -5.2 -4.57073 | TACCTGTTTTAAAAA CTTTAG CCAGT CTAAAG GCAAGTTCCAGCGAT TERM 1259 1094580 - 1094569 - H 81 -3 -5.64421 | opp_overlap 1094569 ACGGGAAATAAAAAA GAAT CGAT ATTC TCATTGTTATATAAA TERM 1260 1096422 - 1096412 - g 73 -8.2 -3.67175 | opp_overlap 1096412, overlap 1096408 ATTGCCGAAAATGAA GCCC TCC GGGC TGCTTCCAAAAAAAA TERM 1261 1096493 - 1096481 - g 72 -7.7 -3.83864 | overlap 1096484 AAAATTTCAGAAGAA CAAGC CGA GCTTG AGGCGGCTAAGCTGA CBUD_1116 1094753 - 1096831 + | hypothetical protein TERM 1262 1096846 - 1096872 + F 100 -13.9 -4.66833 | opp_overlap 1096846 1096849 ATTCTTCCTTTAAAA GAATCCATCTC TTAAT GAGATGGATTC TTTTTACAGTTAAAC TERM 1263 1096872 - 1096846 - f 100 -13.9 -4.07687 | opp_overlap 1096846, overlap 1096849 ATTCTTCCTTTAAAA GAATCCATCTC TTAAT GAGATGGATTC TTTTTACAGTTAAAC TERM 1264 1096869 - 1096849 - f 89 -9.8 -4.17048 | opp_overlap 1096846, overlap 1096846 CTTCCTTTAAAAGAA TCCATCTC TTAAT GAGATGGA TTCTTTTTACAGTTA CBUD_1117 1096955 - 1097233 + | hypothetical cytosolic protein TERM 1265 1097653 - 1097665 + F 80 -6.3 -4.70887 | ATGCCAGTCCTAGTA GCAAT AAT ATTGC TTTCTTTGTTCATCG TERM 1266 1098001 - 1097989 - f 100 -5.5 -6.17268 | GTAGAAGAAAAAAAA GCAGA AAG CCTGC GACAACAACAGGATT CBUD_1117c 1098596 - 1098739 + | hypothetical protein CBUD_1121 1099012 - 1099407 + | acetyltransferase, GNAT family CBUD_1122 1099411 - 1099887 + | DinB family protein CBUD_1124 1101108 - 1100653 - | hypothetical protein TERM 1267 1101077 - 1101087 + g 87 -5.4 -5.5454 | TCTAAACATATTGTT GGTA ATT TACC TTTTTGTTTCTTTGA TERM 1268 1102827 - 1102817 - g 73 -5.4 -4.64598 | CAAGCATTTGAAAAA CCTT TAT AAGG GAGGTGAATTAGAGA TERM 1269 1102875 - 1102848 - g 91 -6.4 -5.42131 | gap 1, overlap 1102841 1102852 GAATTAGAGAAAAAA GCAACTGTTTCCA TTT TGGAAACGGTT-C AAATGGAAGGCAATA TERM 1270 1102872 - 1102852 - g 77 -8.3 -4.01646 | overlap 1102841 1102848 TAGAGAAAAAAGCAA CTGTTTCCA TTT TGGAAACGG TTCAAATGGAAGGCA TERM 1271 1103023 - 1102999 - g 74 -10.1 -3.13403 | overlap 1102977 1102997 TTTGGGCTACCAAGA CCCTGAAGCAA CAT TTACTTCAAGG TTACACCATCGATAA rhuM 1102650 - 1103636 + | RhuM CBUD_1127 1103761 - 1104762 + | hypothetical membrane associated protein TERM 1272 1104834 - 1104892 + F 72 -10.5 -2.71497 | gap 1, opp_overlap 1104842, overlap 1104835 AATTATGATTTAAGA T-TTAATAACCCCTGTCACTACGTTAGC GCAA GATAACGTAGTGACAGGGGGTATAACCG ATTGATTTCAAATAA TERM 1273 1104883 - 1104842 - f 100 -24.7 -3.7347 | opp_overlap 1104834 1104835 TTTAAGATTTAATAA CCCCTGTCACTACGTTAGC GCAA GATAACGTAGTGACAGGGG GTATAACCGATTGAT TERM 1274 1104943 - 1104989 + F 70 -9 -3.18452 | opp_overlap 1104958, overlap 1104946 GTGATGGGCCAGTGA CAGTTTTTTTAGAAAGTAAATG GAT CTTTTACTGTCTAAAAAAATCG TTACCTTAAAGTAAT TERM 1275 1104946 - 1104986 + F 80 -11.5 -2.78891 | opp_overlap 1104958, overlap 1104943 ATGGGCCAGTGACAG TTTTTTTAGAAAGTAAATG GAT CTTTTACTGTCTAAAAAAA TCGTTACCTTAAAGT CBUD_1127a 1105003 - 1105104 + | hypothetical protein TERM 1276 1105150 - 1105163 + T 74 -5.3 -4.788 | AATTTTTATAATTTG TCACT TTTT AGTGA TTTTTAAATTAATTT TERM 1277 1105440 - 1105426 - T 70 -8.6 -3.36919 | opp_overlap 1105434, overlap 1105434 ACAAAACGCCCACAA GGTCAA ATT TTGACC AACTGGTAAAATTGG CBUD_1130 1106032 - 1105592 - | rhodanese-related sulfurtransferase TERM 1278 1105897 - 1105908 + g 82 -2.2 -5.60993 | CTTCTACAGGCCCTG TGGT AAAA GCCA TTTTTTTCTCAAAAA TERM 1279 1106107 - 1106120 + H 70 -3.1 -4.91046 | ACTTTAAGGAGTTGC GATGT TAAG ACGTC TTTGTTTCTTTTGTC CBUD_1131 1106108 - 1106491 + | hypothetical protein CBUD_1132 1106765 - 1106493 - | hypothetical cytosolic protein mutY 1107826 - 1106762 - | A/G-specific adenine DNA glycosylase TERM 1280 1106801 - 1106839 + g 70 -9.6 -2.77135 | opp_overlap 1106802 1106803, overlap 1106800 1106798 TAATTGTTTCAATAA ACGG-GCTACCGGGGCGG CAATA CCGCCC-GGTAGCGCTGA GTGTTCTTTATACCA TERM 1281 1106837 - 1106802 - G 100 -11.8 -4.15788 | gap 1, opp_overlap 1106801 1106800 1106798, overlap 1106803 AATTGTTTCAATAAA CGGGCTACCGGGGCGGC AAT ACCGCCC-GGTAGCGCT GAGTGTTCTTTATAC TERM 1282 1106836 - 1106803 - G 100 -15.3 -3.08991 | gap 1, opp_overlap 1106801 1106800 1106798, overlap 1106802 ATTGTTTCAATAAAC GGGCTACCGGGGCGGC AAT ACCGCCC-GGTAGCGC TGAGTGTTCTTTATA TERM 1283 1107482 - 1107454 - G 73 -5.8 -4.5442 | TCCCTAACGATAAAA CAGCGCCGGCGG TTGAG CGGCCGATGCCG GGTAGGCTGGATAAG CBUD_1134 1109358 - 1107832 - | ASMA TERM 1284 1108797 - 1108809 + g 74 -4.1 -4.93547 | opp_overlap 1108797 TCTTTTTTAAAGAAG TCGTT GAA GACGA TTTTTGATTAATTAA TERM 1285 1110059 - 1110071 + r 80 -4.7 -5.27335 | opp_overlap 1110059 GCTTGAAAAATAAAG CGGCC CGG GGCAG TTTTTATTTCAGAAC CBUD_1137 1111689 - 1110238 - | hypothetical protein TERM 1286 1110486 - 1110500 + g 76 -7.8 -4.13282 | opp_overlap 1110484, overlap 1110487 CGATGCCAATGGAGC TCGGCT TTG AGCCGG TTTTGAACGTGTAAT TERM 1287 1111934 - 1111956 + H 71 -6.4 -4.14392 | AAGCTTGACTCCCGG CTCTGATTAT GGA ATAGTTAGAG TTTTGAAAGTTAAAG CBUD_1138 1112001 - 1112573 + | OmpA-like transmembrane domain protein CBUD_1139 1112766 - 1113155 + | RNA binding protein CBUD_1140 1113161 - 1114075 + | ABC transporter ATP-binding protein TERM 1288 1114627 - 1114637 + G 82 -4.6 -5.26316 | opp_overlap 1114627 TACGCCTTTAACTTA CCTC GGT GGGG TTTTTTATCCCATCA CBUD_1142 1114076 - 1114849 + | ABC transporter permease protein glpK 1116362 - 1114818 - | glycerol kinase TERM 1289 1115249 - 1115239 - G 79 -8.2 -4.23213 | GTCAGACCGAATAAA GCGC CCC GCGC GTTGGGGTCCCAGTA TERM 1290 1116721 - 1116752 + G 78 -7.4 -4.43208 | gap 1, overlap 1116725 1116726 CGCATGACGCGCATT TACGCCCTGTTTGGA TGA TCCGAACAGG-CTTA TTTCTTTACACCTCT TERM 1291 1116725 - 1116749 + G 88 -9.3 -4.32678 | overlap 1116721 1116726 TGACGCGCATTTACG CCCTGTTTGGA TGA TCCGAACAGGC TTATTTCTTTACACC TERM 1292 1116726 - 1116748 + G 95 -12.8 -3.18884 | overlap 1116725 1116721 GACGCGCATTTACGC CCTGTTTGGA TGA TCCGAACAGG CTTATTTCTTTACAC TERM 1293 1117321 - 1117339 + G 79 -7.6 -4.25256 | opp_overlap 1117324 AAGAAACGAATTATT TAATTGAT TCG ATCAATTA TTATTTTACTAAACC glpD 1116429 - 1117931 + | glycerol-3-phosphate dehydrogenase mpg 1117915 - 1118595 + | DNA-3-methyladenine glycosylase II CBUD_1145 1118465 - 1119430 + | short chain dehydrogenase pdxH 1119452 - 1120042 + | pyridoxamine 5'-phosphate oxidase TERM 1294 1120913 - 1120923 + G 71 -6.8 -4.11235 | GGCAGCTGGCGAGCG CTGC ATG GCAG TTTCTGTGGTGGTTG TERM 1295 1121010 - 1120992 - g 70 -5.2 -4.53077 | TTAAAAGAAAAAATA CCGCAGCT CCA AATTGCGG CGGGCACTGAATCAC TERM 1296 1121302 - 1121314 + G 72 -7.7 -3.90048 | opp_overlap 1121301 1121300, overlap 1121300 ACAAAAATGAATACG GCAAC GGT GTTGC TATTTTTACAAAAAG mmsA 1120074 - 1121570 + | malonate-semialdehyde dehydrogenase (acetylating) mmsB 1121580 - 1122473 + | 3-hydroxyisobutyrate dehydrogenase TERM 1297 1123197 - 1123255 + G 100 -17.7 -2.94232 | opp_overlap 1123213 1123215, overlap 1123198 1123214 1123215 CGCTGTTGATTATGA TGGCGATGGAAGAAAAGACATCTGGAA TGATC TTCCCGATGCTTTTGCTTCCATTGCCA ATTATTTAGCGAAAC CBUD_1149 1122574 - 1123575 + | membrane-bound lytic murein transglycosylase B mdmC 1123577 - 1124245 + | O-methyltransferase CBUD_1150 1125370 - 1124240 - | hypothetical membrane spanning protein TERM 1298 1125335 - 1125314 - G 71 -8.7 -3.28712 | opp_overlap 1125304, overlap 1125315 TGTTTCCTTCCACAA GCTCTTCCG CAAT CGGAAGAGT AGGAGAGGGTCTATC TERM 1299 1125334 - 1125315 - G 83 -12.2 -2.57132 | opp_overlap 1125304, overlap 1125314 GTTTCCTTCCACAAG CTCTTCCG CAAT CGGAAGAG TAGGAGAGGGTCTAT TERM 1300 1125419 - 1125434 + rH 71 -6 -4.28656 | opp_overlap 1125419 1125418 GCGGTTGAAAGTAAC GCCGAC ACTT GACGGC TTTTGCCTATTAAGT TERM 1301 1126566 - 1126553 - gR 73 -5.9 -4.46742 | opp_overlap 1126565 AAAGAAATCAATAAA GCCGC ATTA GCAGC AACCGTAGTGGCTTT CBUD_1150a 1127066 - 1126752 - | hypothetical cytosolic protein CBUD_1152 1125491 - 1126804 + | transporter, MFS superfamily TERM 1302 1126877 - 1126867 - GT 71 -6.8 -3.97043 | CTTAACATAGAAGAA GACG AGG CGTC ACCAAGCATGTTTTC CBUD_1153 1128212 - 1127097 - | acyl-CoA desaturase TERM 1303 1129610 - 1129597 - R 82 -3.8 -5.45802 | opp_overlap 1129599 1129600, overlap 1129599 1129600 GTGTTAAAACAAAAA GAGG AGGGTA CCTC ATTATTATTTGAAAT TERM 1304 1129701 - 1129713 + r 80 -6.3 -4.68424 | opp_overlap 1129701 1129700 ATTATTATCCAGAAG TTCTG TGA CAGAA TTTTTGCCTCCATTA TERM 1305 1129915 - 1129944 + r 85 -12.4 -3.23045 | overlap 1129913 AAATAAATGCCTAGC TAGTGGTGATTA TCACAC TAATCACCACTA TATTAATATATGAAT TERM 1306 1131570 - 1131582 + r 80 -2 -5.59564 | overlap 1131576 1131578 TTCATTTTCTAAGCC TTCT CTTTC AGAA TTTTTTTGAATTTCT TERM 1307 1131892 - 1131902 + r 100 -5.4 -5.85011 | ATATCAGCATATAGT GAAC CAA GTTC TTTTTTTAATTTTTC CBUD_1158 1133994 - 1133227 - | endonuclease/exonuclease/phosphatase family protein TERM 1308 1134213 - 1134223 + G 73 -2.6 -5.23644 | TGAGAGTTTATTATT TAAA AAT TTTA TTTTTCTGTTTAATT enhB.1 1134188 - 1134697 + | enhanced entry protein CBUD_1160 1134699 - 1135814 + | hypothetical membrane spanning protein TERM 1309 1135990 - 1136011 + F 100 -14.5 -6.38039 | opp_overlap 1135995 AGATTAGTTCATTTA GGGAATGCC TTTG GGCATTCCC TTTTTTTTTTACGTC CBUD_1161 1136055 - 1136528 + | thioesterase prpD 1136530 - 1137954 + | 2-methylcitrate dehydratase TERM 1310 1138050 - 1138005 - f 100 -15 -3.78775 | gap 1, opp_overlap 1138000, overlap 1138011 GCCCGTATGAGCAAA GCGAAATACGGGAACAA-AGA TGTCT TCTATCGTCCCCGTATTCCGC TGCGCTTCATACGGG TERM 1311 1138044 - 1138011 - f 71 -7.6 -3.87551 | gap 1, opp_overlap 1138000, overlap 1138005 ATGAGCAAAGCGAAA TACGGGAACAA-AGA TGTCT TCTATCGTCCCCGTA TTCCGCTGCGCTTCA TERM 1312 1138175 - 1138189 + F 71 -4.2 -5.00616 | overlap 1138176 ACCATTAGATCCGAT ACCCTT AAT AAGGGA TTTTTTCCACACAGC CBUD_1164 1139282 - 1140418 + | hypothetical protein CBUD_1165 1140866 - 1140582 - | hypothetical cytosolic protein CBUD_1166 1141448 - 1140894 - | 2'-5' RNA ligase TERM 1313 1141207 - 1141217 + g 70 -2.6 -5.03961 | TCTATTTTATTGATA TTTA TTT TAAA TTTTATTGTTTCCTT TERM 1314 1141344 - 1141361 + g 73 -5.6 -4.41241 | CCACCGCAAATGAGT CCATTG CTTGAT CAATGG TTTTATCGCCGTTTG TERM 1315 1143107 - 1143126 + G 70 -5.6 -4.40692 | overlap 1143105 1143110 GATCCCTTTTTAATG GCAGTGGC CATT GCCGCTTC TTGTTCTTTTTTAAC TERM 1316 1143110 - 1143123 + G 70 -5.9 -4.26602 | overlap 1143105 1143107 CCCTTTTTAATGGCA GTGGC CATT GCCGC TTCTTGTTCTTTTTT CBUD_1168 1141505 - 1143286 + | transporter, Divalent Anion:Sodium Symporter family ttcA 1144053 - 1143283 - | tRNA s2C32 biosynthesis protein TERM 1317 1146701 - 1146713 + G 86 -2.7 -5.82036 | AAAGAATACTTGATT TATGC GTT GTATA TTTTTTCTTTCTTAT CBUD_1171 1146068 - 1148140 + | intracellular signalling protein CBUD_1172 1148586 - 1148158 - | hypothetical membrane spanning protein TERM 1318 1148430 - 1148412 - G 71 -4.6 -4.62783 | overlap 1148415 1148425 CACCCAGCTCAAAAA TGATCGAT AGA ATCGATAA CCACCGCGGTGATGG TERM 1319 1149565 - 1149582 + G 71 -3.3 -4.96646 | ATTTAATCGACGTGG TGGCGGC AGGA GTCGACA TTTTTGATTGTGTCG tgt 1148751 - 1149908 + | queuine tRNA-ribosyltransferase TERM 1320 1149942 - 1149973 + G 95 -12.4 -3.36671 | CTCTTGTTAATTCTC TCTTTTGGCTGCGT CCAG GCGCAGGCAAAAGA TTATCAGATTGAAAT CBUD_1175 1149912 - 1150418 + | hypothetical protein CBUD_1176 1151045 - 1150440 - | hypoxanthine-guanine phosphoribosyltransferase CBUD_1177 1152138 - 1150987 - | mechanosensitive ion channel TERM 1321 1152006 - 1151993 - GR 72 -3.1 -5.00884 | AGCGCTTGTAAAAAA GCTTG CAAC CAAAC CCGCTGCCGTCGCTG CBUD_1178 1152299 - 1152186 - | hypothetical protein TERM 1322 1152275 - 1152308 + g 83 -8.9 -4.08317 | gap 1, opp_overlap 1152275 CGGGGACCCAGCTAA GTAGCCCGTATTTCGC TTC GCTCA-TACGGGCTAC TTTACTTTCGCCTTG nagZ 1153303 - 1152362 - | anhydromuramoyl-peptide exo-beta-N-acetylglucosaminidase CBUD_1180 1153645 - 1153307 - | hypothetical cytosolic protein TERM 1323 1153460 - 1153477 + g 74 -4.2 -5.06414 | ACTTCGTTTTACACC CTGAAA CTCTGT TTTCAG TTTTTCTTCAGAAGG CBUD_1181 1154249 - 1153653 - | hypothetical protein CBUD_1182 1154809 - 1154327 - | ErfK/YbiS/YcfS/YnhG family protein TERM 1324 1154833 - 1154853 + r 90 -11.2 -3.84719 | opp_overlap 1154833 TAATAAATTGGATAA CACCCCAT AAACA ATGGGGTG TTTGAGTTTGAAGGT TERM 1325 1154853 - 1154833 - R 85 -11.2 -3.42197 | opp_overlap 1154833 TAATAAATTGGATAA CACCCCAT AAACA ATGGGGTG TTTGAGTTTGAAGGT CBUD_1183 1155220 - 1154882 - | hypothetical protein TERM 1326 1155201 - 1155186 - G 76 -7.6 -4.15565 | TTTAGGATTTTAAAA GCCTTT ATAA AAAGGC GATAATAATATGCAC TERM 1327 1155350 - 1155303 - R 72 -9.4 -3.09516 | gap 2, opp_overlap 1155303 GCCCGTATGAGCGAA GCGAAATACGGGGAAACAATGG TGTTGT CAATCG-T-CCCCGTATTTCGC TTCGCTCCATACGGA miaA 1156415 - 1155402 - | tRNA delta(2)-isopentenylpyrophosphate transferase mutL 1158067 - 1156340 - | DNA mismatch repair protein TERM 1328 1157471 - 1157485 + gr 73 -3.6 -4.94972 | TGTAGTGGCTGATTT GAAATG AAT TATTTC TTTTTCATTATGATG TERM 1329 1157593 - 1157609 + gr 77 -10.1 -3.29263 | opp_overlap 1157592 1157595, overlap 1157574 1157595 GCGAGCGTAAAAATT TACGCCG AGC CGGCGTG TTATAAAACAAATCT TERM 1330 1157595 - 1157607 + gr 77 -10.5 -3.21395 | opp_overlap 1157592 1157595, overlap 1157574 1157593 GAGCGTAAAAATTTA CGCCG AGC CGGCG TGTTATAAAACAAAT TERM 1331 1157607 - 1157595 - GR 75 -10.5 -2.84617 | opp_overlap 1157574 1157595 1157593, overlap 1157592 GAGCGTAAAAATTTA CGCCG AGC CGGCG TGTTATAAAACAAAT CBUD_1187 1160179 - 1158128 - | two component system histidine kinase CBUD_1188 1161434 - 1160217 - | N-acetylmuramoyl-L-alanine amidase CBUD_1190 1163042 - 1162596 - | ATP/GTP hydrolase CBUD_1191 1164516 - 1163056 - | sugar kinase TERM 1332 1163422 - 1163406 - G 73 -7.3 -4.1822 | overlap 1163417 CTTCATTGCAAGAAA TTCCCAA CAA TCGGGAA GCTTCGCCGGGATGA TERM 1333 1163913 - 1163899 - G 74 -4.2 -5.04385 | GACAGCCCGAAAAAA GGACTC CGA AAGCCC TAAGCGATCCACGAT TERM 1334 1164393 - 1164405 + g 73 -9.1 -3.53224 | opp_overlap 1164402 1164403 GAGCCTCGGGCCATC GCGCT AGA AGCGC TTTAAAAGCGGCCTC TERM 1335 1164491 - 1164515 + g 78 -5.7 -4.78477 | overlap 1164483 TCTAATTCGCGAATT TGGCGGTTTTG GTA CAATACTGTCA TTCTTTTTTCTCTAT CBUD_1191a 1164552 - 1164650 + | hypothetical protein TERM 1336 1164835 - 1164847 + T 83 -3.3 -5.60993 | AAAAATAATAAAGCC GCTAG CCT CGAGC TTTTTTTCTGCGGGA rnr 1167085 - 1164836 - | ribonuclease R TERM 1337 1167385 - 1167409 + r 86 -7.2 -5.055 | TTTTCCTTTGTTATT CATCTACCTT CCGCA AAGGTTGATG TTTTTTCGCAATTAA CBUD_1193 1170439 - 1167380 - | acriflavin resistance plasma membrane protein TERM 1338 1169328 - 1169317 - G 73 -3.6 -4.94168 | ACATAAGAAAACAAA CGCC AATA AGCG AGAGCGGAATCGTAA CBUD_1194 1171581 - 1170439 - | acriflavin resistance periplasmic protein CBUD_1196 1171767 - 1172330 + | hypothetical protein TERM 1339 1173071 - 1173060 - g 73 -3.6 -5.03145 | CAATTTGCCAAAAAA GCGG CTGA CCAC ATTGCCGAACTGACG fumC 1172334 - 1173713 + | fumarate hydratase CBUD_1198 1173780 - 1174028 + | hypothetical protein TERM 1340 1174250 - 1174234 - T 79 -9.4 -3.64703 | opp_overlap 1174242 TTTTCTGGATTTAAA CGGCGA GATGG TCGCCG TGGACGGCCATTATT CBUD_1200 1175659 - 1174835 - | hypothetical cytosolic protein TERM 1341 1175464 - 1175483 + g 73 -2.8 -5.22258 | gap 1, overlap 1175467 GGTTCGACCTTTTAG GATCGGCTA ATA TCGCCG-TC TTTTCTTTTGATTTA lepB1 1176581 - 1175802 - | signal peptidase I CBUD_1202 1177019 - 1176591 - | hypothetical protein CBUD_1202a 1177142 - 1177285 + | hypothetical protein CBUD_1204 1177390 - 1178436 + | hypothetical cytosolic protein CBUD_1205 1179717 - 1178437 - | membrane-bound lytic murein transglycosylase D precursor TERM 1342 1181073 - 1181057 - g 77 -3.7 -5.10767 | opp_overlap 1181069, overlap 1181060 TATTGAAGAGAAAAA TCAGC CTCCATT GCTGA TGACGGCCTCTTTCT TERM 1343 1181245 - 1181270 + G 76 -9.8 -3.30635 | overlap 1181228 1181234 CTCTGGATGCTTCGG GCGTTCTTTC ATTAAA GAAAGAGCGC TTGTCAGCCGATTTC TERM 1344 1181746 - 1181764 + G 100 -4.5 -6.02914 | AAAGGCTATCGCAAG CGGCGCA AATAG TGTGTCG TTTTTTTTATGTGAG CBUD_1208 1181022 - 1182416 + | hypothetical cytosolic protein TERM 1345 1182594 - 1182616 + G 84 -11.2 -3.58533 | opp_overlap 1182594 1182596, overlap 1182585 1182598 CTCTACTACATCCAA GAGGGGCTCC CGA GGAGCCTCGC TTTAACGAATTATGA TERM 1346 1182614 - 1182596 - g 77 -10.2 -3.13299 | opp_overlap 1182594 1182585 1182598, overlap 1182594 CTACTACATCCAAGA GGGGCTCC CGA GGAGCCTC GCTTTAACGAATTAT TERM 1347 1182598 - 1182612 + G 80 -11.4 -2.64651 | opp_overlap 1182596 1182594, overlap 1182594 1182585 ACTACATCCAAGAGG GGCTCC CGA GGAGCC TCGCTTTAACGAATT TERM 1348 1182815 - 1182838 + G 91 -8.2 -4.63592 | TCAAAATGCAGCCGC TCAAGCGC TCGAGAAC GCGCTTGA TTATTTTTGTTGGAA TERM 1349 1183529 - 1183512 - g 71 -3.3 -5.00616 | overlap 1183497 1183513 GGGCGCCGGAAAAAA TTCGAGC GACC GCCCGAG GATGTGTCGAATATA CBUD_1209 1182486 - 1186403 + | hypothetical protein CBUD_1210 1189687 - 1186511 - | hypothetical membrane associated protein TERM 1350 1189519 - 1189530 + g 73 -3.6 -5.07567 | TACTTTCTTTTTCTT CCGT TAGG GCGG TTTTTTCCAATATGC CBUD_1211 1190969 - 1189755 - | membrane-bound lytic murein transglycosylase A TERM 1351 1190516 - 1190534 + g 80 -2.5 -5.44119 | GTAATCCATAAACAG GAAAAAT ATAGG GTTTTTC TTTTTTTAAACTCCC TERM 1352 1191388 - 1191422 + H 82 -11.4 -3.20435 | opp_overlap 1191388 TTTTTTTAACAAAAA GTAGCCCGTATGGAGC GCA GCGGAATACGGGCTAC TTGCTAAATACTTGC TERM 1353 1191422 - 1191388 - H 95 -11.4 -5.06414 | opp_overlap 1191388 TTTTTTTAACAAAAA GTAGCCCGTATGGAGC GCA GCGGAATACGGGCTAC TTGCTAAATACTTGC TERM 1354 1191660 - 1191640 - H 71 -3.9 -4.98436 | TCAAGAGGATAAAAA CTGCCGCCA CCA TAACGGAAG TCGAAAGAACGACAC TERM 1355 1192000 - 1192030 + H 85 -2.6 -5.75945 | overlap 1192003 1192008 ACCTGTTCACGAGCA TGATCACTGGCATT ACC AATGTCGTTGATAA TTTTTTTTAGCGCCT TERM 1356 1192861 - 1192887 + G 79 -6.6 -4.63179 | opp_overlap 1192864, overlap 1192864 ACCGTTTATGGGAAG GAATCATGCCAA TTG TGGGCATGATTG TTTTCGTTATTCTTT TERM 1357 1192864 - 1192884 + G 82 -8.3 -4.38092 | opp_overlap 1192864, overlap 1192861 GTTTATGGGAAGGAA TCATGCCAA TTG TGGGCATGA TTGTTTTCGTTATTC CBUD_1215 1192758 - 1193075 + | hypothetical protein ald 1194185 - 1193076 - | alanine dehydrogenase etfA 1195158 - 1194214 - | electron transfer flavoprotein alpha-subunit TERM 1358 1194763 - 1194794 + g 77 -3.6 -5.15634 | opp_overlap 1194763 CTGAACGGTAGCAAT CGCATTGCCGGC ATAGATCG GGCGGCAGTACG TTTTTTCATCGACTA etfB 1195907 - 1195155 - | electron transfer flavoprotein beta-subunit CBUD_1219 1196680 - 1195904 - | carboxymethylenebutenolidase TERM 1359 1197509 - 1197519 + G 77 -8.2 -4.0156 | CGAAAATAACCTTTT GGCC ATT GGCC TTGTTGTTGGTCTGG TERM 1360 1197689 - 1197722 + G 73 -5.3 -4.60041 | gap 1, overlap 1197690 TCCCACGCTTACTTT TCCCGGTGGAATGCTC ATC GGGTGTTCTGC-GGGA TTTTTAAACGTAGGT CBUD_1221 1196748 - 1198373 + | electron transfer flavoprotein-ubiquinone oxidoreductase TERM 1361 1198401 - 1198376 - T 70 -9.7 -2.52933 | opp_overlap 1198400, overlap 1198375 TTCTAATTTATGAAT CCCCTCTCCCA CAAG CGGGAGAAGGA CGGTTTTTCGGAAGG CBUD_1220 1198550 - 1198368 - | hypothetical protein TERM 1362 1198515 - 1198499 - G 74 -6.7 -4.36595 | CAGTTAAATGCAAAA CAATATT TAA AATATTG ACGCTATCCTTCGTT TERM 1363 1199177 - 1199192 + G 77 -4.7 -4.9725 | overlap 1199165 1199162 GAATGGCGGTGCGCC CATGC TCTATT GCATG TTTTTCTATCGCGGT enhA2 1198578 - 1199339 + | enhanced entry protein cbpA 1199491 - 1200516 + | curved DNA-binding protein cbpM 1200519 - 1200839 + | hypothetical protein TERM 1364 1200852 - 1200867 + G 70 -2.6 -5.05301 | overlap 1200852 1200859 TAAAAAATGACTCAA TCATTA CGGA TGATGA TTTTTATCATTCTTT TERM 1365 1200859 - 1200879 + G 87 -5.5 -5.44721 | overlap 1200852 1200852 TGACTCAATCATTAC GGATGATGA TTT TTATCATTC TTTTTTTAACCTCAT CBUD_1225 1200843 - 1202147 + | chitinase TERM 1366 1202213 - 1202229 + T 91 -13.7 -2.52896 | opp_overlap 1202224 1202225 CGCACATCGTGCGCT GCGCGCT AAA AGCGCGC TGGATTCCCGCCTGC TERM 1367 1202354 - 1202330 - T 93 -7.8 -5.47399 | gap 1 TTAATTTCAAAAAAA CCCCGTCGTGC CCGC GCAGG-CGGGG ACCCAGTGCACGGCG CBUD_1226 1202975 - 1202436 - | hypothetical membrane spanning protein TERM 1368 1202549 - 1202576 + g 75 -9 -3.60151 | opp_overlap 1202552, overlap 1202552 TATCTAACACCATAA CAACCGCCAGTC CAGC GGCGGGCGGGTG TTCTAATTTAAAAAG TERM 1369 1202573 - 1202552 - G 72 -7.9 -3.89291 | gap 1, opp_overlap 1202552 1202549 CTAACACCATAACAA CCGCCAGTCC AGC GG-CGGGCGG GTGTTCTAATTTAAA CBUD_1227 1203310 - 1202951 - | IscU TERM 1370 1203341 - 1203360 + r 87 -8.6 -4.56775 | TACTTTTGCCTTCAC TGTTTCCC ACAC GGGAGACA TTTTTCGCAAACGAT iscS 1204507 - 1203317 - | cysteine desulfurase TERM 1371 1204255 - 1204245 - G 74 -4.6 -4.84359 | opp_overlap 1204245 TGACGGCGATAAAAA GAGG CAG CCCC TTTAAGGGCAAGGTT CBUD_1229 1206573 - 1204504 - | oligopeptide transporter TERM 1372 1204545 - 1204535 - G 75 -8.2 -3.82864 | overlap 1204531 ACGTAATAAAACCAA GCGC AGA GCGC TAAAAATACAATCAC TERM 1373 1205470 - 1205453 - G 78 -4.1 -5.1361 | ACAAAGGCTAAAAAA TTCCCCG ATCC CAGGAAA TTAGCTTCTCGAAAA CBUD_1230 1207286 - 1206564 - | rRNA methylase, SpoU family TERM 1374 1207033 - 1207048 + g 74 -10.4 -2.70932 | AGCAGCCATGGCAGT GTGCGC GAGC GCGCAC TGGTTCCAAAAACGA TERM 1375 1207218 - 1207190 - G 70 -5.4 -4.49556 | gap 1, overlap 1207192 GTTTTACTAAATAAA GTCT-TGAAAACC CCAT GGTTTTCATAGCC CTCGCCGCTGCCCCG TERM 1376 1207346 - 1207327 - H 73 -7.8 -3.95584 | overlap 1207322 CTTTCATGAAGGAAA CGCACAGG CGCG CGTGTGCG TTAGGCCTCGCCTGC CBUD_1230a 1207381 - 1207479 + | hypothetical protein TERM 1377 1208027 - 1208014 - g 71 -9.5 -2.90813 | opp_overlap 1208013 1208005 1208014, overlap 1208011 TATTTCCTCAAACCA GCGGC GTTC GCCGC GCCGGTGCCGCTGCC suhB 1207476 - 1208267 + | myo-inositol-1(or 4)-monophosphatase CBUD_1232 1208918 - 1208352 - | hypothetical membrane associated protein TERM 1378 1208946 - 1208934 - R 71 -4.9 -4.58395 | opp_overlap 1208934 CGTATTGCCCAAAAA CTAAT GAA ATTAG TTATCAAGTGAATAA enhC 1212588 - 1209352 - | enhanced entry protein enhC, tetratricopeptide repeat family TERM 1379 1209901 - 1209920 + g 77 -5 -5.00616 | opp_overlap 1209901 TTTTTCATAGTACAA TCGAGCTT TATT AAGATCGA TTTTTTGCGCAACGC TERM 1380 1210297 - 1210308 + g 75 -2.2 -5.41143 | AGCGGGCACGTAATT TTGG GCAG CCGA TTTTTTTAACCAATC TERM 1381 1210809 - 1210819 + g 78 -4 -5.08255 | CTAACATAAATTGTG CAAT AGC ATTG TTTTGTTTTGAAAGT TERM 1382 1211210 - 1211222 + g 77 -4.9 -4.92757 | opp_overlap 1211210 TTCGCCCTATCAAAG TTCTT GAA AAGAA TTTTATTATTGCTAG TERM 1383 1212509 - 1212523 + g 70 -3.5 -4.84359 | overlap 1212510 TTGCCTTCGTAATAC TCCTG GAAGA CAGGG TTTTTATCAGAATAA TERM 1384 1212565 - 1212554 - G 88 -3 -5.86332 | CTAATTGAAAAAAAA CTTA ACGT TAAG ATAAAAACAGCTATT enhB.2 1213139 - 1212585 - | enhanced entry protein enhA1 1213889 - 1213152 - | enhanced entry protein TERM 1385 1214136 - 1214166 + r 84 -10.5 -3.95073 | gap 1, opp_overlap 1214126 1214127, overlap 1214136 TCAAATGCTGCAATT G-CCTAGCCACCCT GATA AGGGTAGCTAGGGC TTTCTACATCTAACC TERM 1386 1214136 - 1214165 + r 78 -10.7 -2.96722 | opp_overlap 1214126 1214127, overlap 1214136 TCAAATGCTGCAATT GCCTAGCCACCCT GATA AGGGTAGCTAGGG CTTTCTACATCTAAC CBUD_1237 1214328 - 1214176 - | hypothetical protein CBUD_1237a 1214540 - 1214400 - | hypothetical membrane associated protein TERM 1387 1215724 - 1215738 + G 70 -7.8 -3.63073 | overlap 1215715 AAGCTGCCACTGAGT CTCACC AGC GGTGGG TTCTTCACCAATCTA TERM 1388 1215794 - 1215780 - g 71 -4.2 -4.86773 | overlap 1215782 CAAAACGAGGAAAAA CAGGAA AGT TTCCAG AAAAATGGTGCCCGT CBUD_1239 1214796 - 1215908 + | hypothetical cytosolic protein secF 1216819 - 1215905 - | protein translocase subunit secD 1218687 - 1216819 - | protein translocase subunit TERM 1389 1216944 - 1216920 - G 78 -5.7 -4.86731 | overlap 1216922 CCCGTGTAAAGAAAA TCGCTGTCACC ATC GACGACAACAA ACCAATAGTCGTCGT TERM 1390 1218458 - 1218401 - G 70 -7.1 -3.74184 | gap 1, overlap 1218402 1218404 AATGCAACGGAATAA TCAGTACCAACGA-CAGCCTGAATCACA TCC TGCGCTTTAAGCTGATCTTCGGTACTGG GAAAGCGAACCAAAA TERM 1391 1218457 - 1218402 - G 75 -10.6 -2.83788 | gap 1, overlap 1218401 1218404 ATGCAACGGAATAAT CAGTACCAACGA-CAGCCTGAATCACA TCC TGCGCTTTAAGCTGATCTTCGGTACTG GGAAAGCGAACCAAA yajC 1219053 - 1218703 - | protein translocase subunit TERM 1392 1218990 - 1218977 - G 75 -5.2 -4.75372 | overlap 1218978 1218979 AGCATGGACCAAAAA CCGC CCGGAT GCGG CGCTTGAGCTGTGAC CBUD_1241a 1219433 - 1219080 - | hypothetical membrane associated protein CBUD_1241b 1219469 - 1219576 + | hypothetical protein TERM 1393 1219729 - 1219682 - T 72 -9.5 -3.09516 | gap 2, opp_overlap 1219682 GCCCGTATGAGCGAA GCGAAATACGGGAA-AACA-ATG ATCT CATCTATCGTCCCCGTATTTCGC TTCGCTCATACGTAT CBUD_1243 1222751 - 1219782 - | lanthionine synthetase (lantibiotic biosynthesis) TERM 1394 1220354 - 1220335 - G 71 -5 -4.64763 | overlap 1220337 TCATGCAAAAAATAA TTGGCTTT CACT AAAGCCCA TATAAATCCCGCCGC TERM 1395 1221666 - 1221680 + g 77 -8.5 -3.99374 | opp_overlap 1221665 TTTTTTCCAGCACAT GCGCC GATAA GGCGC TTCTTGTTCATCGGG TERM 1396 1222034 - 1222061 + g 80 -6.4 -4.8622 | gap 1, overlap 1222037 CCGGTTTAAGGAGTA TTTTCGG-GCAAT ACA ATTGCGCCGATAA TTTTTGATTGAACCA TERM 1397 1222802 - 1222771 - H 100 -5.2 -5.75342 | gap 1, opp_overlap 1222771 TTTCTTCAAAAAAAA GCAGGC-AGATCC GATTCGA GGATTTTGCCTGC TTTGTTTACGTAGAT TERM 1398 1222771 - 1222802 + H 78 -7.4 -4.46514 | gap 1, opp_overlap 1222771 TTTCTTCAAAAAAAA GCAGGC-AGATCC GATTCGA GGATTTTGCCTGC TTTGTTTACGTAGAT trmU 1223105 - 1224220 + | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TERM 1399 1225556 - 1225573 + G 100 -9.9 -4.77165 | TTGGCCTTACTATCG CGCCTTT GGAT AAAGGCG TTTTATTATCCAGCC TERM 1400 1225965 - 1225951 - g 80 -2.8 -5.41787 | GAAAAAACACAAAAA CATATC CGT GATGTG GCGGCCGAATTATTA mfd 1224232 - 1227705 + | transcription-repair coupling factor TERM 1401 1227763 - 1227716 - f 100 -22.3 -3.16921 | opp_overlap 1227716 1227727, overlap 1227727 AGTAACTCGTATGAA GCGCAGCGAAATACGGGAA CGTCATTATT TCCCCGTATTTCGCTGCGC TTCATACGGGCTACT TERM 1402 1227716 - 1227763 + F 100 -22.2 -3.1505 | opp_overlap 1227716 1227727, overlap 1227727 AGTAACTCGTATGAA GCGCAGCGAAATACGGGAACGT CATT ATTTCCCCGTATTTCGCTGCGC TTCATACGGGCTACT CBUD_1247 1227849 - 1228508 + | hypothetical protein CBUD_1248 1229291 - 1228554 - | putative phosphatase TERM 1403 1228983 - 1229000 + g 73 -5.5 -4.68506 | GTCCACATAGCGTTC GCGATAG AAAT CGATCGC TTTTTGAAGTTGCTT TERM 1404 1229565 - 1229581 + G 76 -2.9 -5.40072 | CCAGATCATCGCTCG CGGGGAT GAA ATTACCG TTTTTTTAAAAAACA trpE 1229344 - 1230822 + | anthranilate synthase component I TERM 1405 1231891 - 1231904 + F 73 -2.4 -5.27335 | opp_overlap 1231891 TAAAAATTTTTTAAA CGAA CGCGGA TTCG TTTTTCTTTACGCGC TERM 1406 1232339 - 1232349 + F 72 -4.6 -4.68593 | ACCATTATTTTCAAT GCGG GGG TCGC TTTTTACCTGATGAA TERM 1407 1232577 - 1232565 - g 76 -2.7 -5.26875 | CTTTCAACTAAAAAA TCCTT TAA AAGAA TAATTTCTTCTACGC trpC 1232463 - 1233236 + | indole-3-glycerol phosphate synthase TERM 1408 1233592 - 1233567 - g 70 -2.5 -5.06414 | gap 1, opp_overlap 1233553 CTCCGTTAATAAAAA CGG-GTCGATTT TAA AAGACGACGCCG GAGGGCTTGAGCATC trpBF 1233229 - 1235031 + | N-(5'-phosphoribosyl)anthranilate isomerase trpA 1235048 - 1235851 + | tryptophan synthase alpha chain CBUD_1254 1236549 - 1235848 - | hypothetical protein TERM 1409 1236823 - 1236841 + G 73 -3.9 -5.04987 | AACAGCGCTAGCTGT TCTTTTC ACGCA GAAAGGA TTTTTTACCACTCTT TERM 1410 1237663 - 1237649 - g 81 -7.2 -4.59773 | GCGCAGCGCCAAAAA GTTAGA GCC TCTAAC GGTAATTGTAAAATT CBUD_1256 1236674 - 1238041 + | sterol delta-7-reductase CBUD_1256a 1238058 - 1238195 + | hypothetical cytosolic protein TERM 1411 1238481 - 1238491 + GF 79 -5.4 -4.87892 | opp_overlap 1238481 TTTTTGGCAAAATCA GAAG ATG CTTC TTTCTTTTCTTGAAA TERM 1412 1239180 - 1239194 + GF 100 -8.6 -4.82678 | opp_overlap 1239170 TAGTATCGAAGGTTT TAGTCC TTC GGACTA TTTTAATTTTTATGA TERM 1413 1239614 - 1239592 - gf 71 -4.8 -4.60889 | AATTATTTTGAAAAA GCACTCGAAT TCA ATCCAAGAGC TAAAACGGCGAAGAA CBUD_1257 1238101 - 1239660 + | tetratricopeptide repeat family protein TERM 1414 1241160 - 1241150 - f 81 -6.8 -4.81523 | AAGCAAAAATGAAAA CACC CAG GGTG CCGATGATTGAAGCA TERM 1415 1241553 - 1241587 + F 80 -7.9 -4.323 | gap 1, opp_overlap 1241555 1241571, overlap 1241554 1241555 ATAAATACCTTATTG AATGG-GCGACGTCAA TGAC TTGACGTCGCTCCAAG TTTTCGGTCTTTCAA TERM 1416 1241554 - 1241586 + F 82 -11.4 -3.18657 | gap 1, opp_overlap 1241555 1241571, overlap 1241553 1241555 TAAATACCTTATTGA ATGG-GCGACGTCAA TGAC TTGACGTCGCTCCAA GTTTTCGGTCTTTCA TERM 1417 1241585 - 1241555 - f 100 -14.9 -3.08187 | gap 1, opp_overlap 1241555 1241554 1241553, overlap 1241571 AAATACCTTATTGAA TGG-GCGACGTCAA TGAC TTGACGTCGCTCCA AGTTTTCGGTCTTTC TERM 1418 1241555 - 1241585 + F 95 -14.9 -2.50471 | gap 1, opp_overlap 1241555 1241571, overlap 1241554 1241553 AAATACCTTATTGAA TGG-GCGACGTCAA TGAC TTGACGTCGCTCCA AGTTTTCGGTCTTTC TERM 1419 1242356 - 1242345 - f 70 -3 -5.10077 | AAATAGCGTAAAAAA CAAT ATTA ATTG CAGCCGTTAAATCTG TERM 1420 1243095 - 1243071 - f 74 -5.1 -4.82756 | opp_overlap 1243071 AGACAAGCAACAAAA TTGAAAAGC GCACTAT GCCTTTCAA TGGTCTGACCAACAT CBUD_1261 1243676 - 1245310 + | serine/threonine protein kinase family TERM 1421 1245663 - 1245688 + G 77 -6.1 -4.58685 | AAAGTGAAGGCTACT TGCGCATTGAG CGTA CTAAAGGCGCA TTTTTACGGCAATTT CBUD_1262 1245374 - 1245829 + | small heat shock protein TERM 1422 1245873 - 1245855 - f 89 -10.3 -4.30719 | opp_overlap 1245855 CTTCCCTATAATAAA TACCCCC CACGC GGGGGTA TTTTTTTATTTAAAA TERM 1423 1245855 - 1245873 + F 100 -10.3 -5.95539 | opp_overlap 1245855 CTTCCCTATAATAAA TACCCCC CACGC GGGGGTA TTTTTTTATTTAAAA CBUD_1263 1245978 - 1246184 + | hypothetical membrane associated protein TERM 1424 1246234 - 1246255 + T 100 -14.5 -4.18494 | GGGGAATGCGCGTAG GGGTCGGAA GTCT TTCCGACCC TTTTAGCTACCCATA CBUD_1264 1246710 - 1246258 - | hypothetical cytosolic protein CBUD_1265 1248165 - 1246732 - | RtcB CBUD_1266 1248393 - 1248761 + | hypothetical protein CBUD_1267 1249255 - 1248836 - | hypothetical cytosolic protein TERM 1425 1249219 - 1249199 - G 71 -8.3 -3.54129 | opp_overlap 1249191 1249199 GACAGTTTCGCCAAA GCCGATAAT TCC AATATCGGC TTCGTGATCGAAATA CBUD_1268 1250575 - 1249262 - | hypothetical membrane spanning protein TERM 1426 1250089 - 1250079 - G 73 -5.4 -4.68451 | AAAAATAAGAATAAA TTCG CGC CGAA AAGCGTTGGCCGGAT CBUD_1268a 1250823 - 1252181 + | deoxyribodipyrimidine photolyase CBUD_1268b 1252453 - 1252271 - | hypothetical cytosolic protein TERM 1427 1252505 - 1252471 - H 79 -8.6 -4.08692 | opp_overlap 1252483 GAATCCCGGCTAAAA GCCTAAGAAAAGCGCC ATC GGTGTTTTTCTTAGCC CCCTAATCTGGGTCC TERM 1428 1252483 - 1252493 + H 76 -4.6 -5.06414 | opp_overlap 1252471 AAAGCCTAAGAAAAG CGCC ATC GGTG TTTTTCTTAGCCCCC TERM 1429 1253401 - 1253375 - g 73 -8.8 -3.54424 | overlap 1253391 GCTGATCTTTGCAAA TTCTATCTCGCT AAC AGCGAGCTAAAA AATGCCCGCTGGGCT TERM 1430 1253416 - 1253404 - g 80 -4.7 -5.09895 | opp_overlap 1253405, overlap 1253391 1253405 CAGCGAGCTAAAAAA TGCCC GCT GGGCT TATTTTCAAATTCCC TERM 1431 1253405 - 1253415 + G 79 -8.2 -4.21933 | opp_overlap 1253391 1253405 1253404 AGCGAGCTAAAAAAT GCCC GCT GGGC TTATTTTCAAATTCC TERM 1432 1253415 - 1253405 - g 73 -8.2 -3.65214 | opp_overlap 1253405, overlap 1253391 1253404 AGCGAGCTAAAAAAT GCCC GCT GGGC TTATTTTCAAATTCC CBUD_1270 1252760 - 1253974 + | hypothetical protein TERM 1433 1254104 - 1254125 + G 78 -5.7 -4.84527 | GATGTGTACGTGCCG GCGGTGCCG CATA TGGCGACGC TTTTTCATGTGTCCG TERM 1434 1254229 - 1254244 + G 82 -3.2 -5.49729 | gap 1 TTCCGATCAGTATGG GC-GGCG ACG CGTCAGC TTTTTTTCAATAGTT TERM 1435 1254495 - 1254507 + G 85 -4.1 -5.52347 | TCGATGTTCATTTGG GTTGG CAA TCAAC TTTTTTAATTTTATT TERM 1436 1255037 - 1255023 - g 70 -9.2 -2.87463 | opp_overlap 1255023 1255026 1255026 1255031 1255033 1255034, overlap 1255025 AACCTTTCGGAGATA CAGCCG GCG CGGCCG CTGCTTTAAGCGGCT TERM 1437 1255026 - 1255060 + G 78 -2 -5.54907 | gap 1, opp_overlap 1255025 1255023, overlap 1255023 1255026 1255031 1255033 1255034 CTTTCGGAGATACAG CCGGCGCG-GCCGCT GCTTTA AGCGGCTCTTTTCGG TTTTTATTTTCTGCC TERM 1438 1255034 - 1255051 + G 75 -8.4 -3.83717 | opp_overlap 1255025 1255023, overlap 1255026 1255023 1255031 1255033 1255026 GATACAGCCGGCGCG GCCGCT GCTTTA AGCGGC TCTTTTCGGTTTTTA TERM 1439 1255122 - 1255139 + G 74 -4.1 -5.04868 | gap 1, opp_overlap 1255116, overlap 1255124 TCTCATCAACATTGC CA-CTGGC TTT GCCGGCTG TTTTATTTAGTTTAG CBUD_1271 1254017 - 1255213 + | multidrug resistance transporter, Bcr family CBUD_1271a 1255364 - 1255233 - | hypothetical protein thiI 1256581 - 1255403 - | thiamine biosynthesis protein TERM 1440 1256451 - 1256440 - G 73 -5.8 -4.46233 | TTAATTGTAAATAAA GTCG GCCA CGAC ACTGTTCAATAGGGG CBUD_1273 1257724 - 1256582 - | cysteine desulfhydrase CBUD_1274 1257953 - 1258291 + | glycine-rich RNA-binding protein TERM 1441 1258270 - 1258284 + T 79 -9.2 -3.8709 | GGGTGGTCGAGGCGG CGGTCG AGG CGGCCG TTTCTAAGCCACTTT TERM 1442 1258343 - 1258314 - T 75 -9.4 -3.28712 | opp_overlap 1258318, overlap 1258318 TCTCCTTTCCCACAA CAAAGCGAGGAA ATAAAA CTCCTCGCTTTA CTTAAAAGGATGGAA TERM 1443 1258339 - 1258318 - T 77 -8 -4.30719 | opp_overlap 1258318, overlap 1258314 CTTTCCCACAACAAA GCGAGGAA ATAAAA CTCCTCGC TTTACTTAAAAGGAT TERM 1444 1258318 - 1258339 + T 71 -7.3 -3.90291 | opp_overlap 1258314 1258318 CTTTCCCACAACAAA GCGAGGA AATAAAAC TCCTCGC TTTACTTAAAAGGAT CBUD_1275 1259090 - 1258362 - | acyltransferase family protein TERM 1445 1258955 - 1258981 + g 71 -3.1 -4.95487 | CTTTGTGCTCTTTCT TCAGAAAGC CCCGAAATT GTTTTCTGA TTTTGTGTTTGTTTT uvrC 1261022 - 1259193 - | excinuclease ABC subunit C TERM 1446 1261310 - 1261292 - H 72 -10.2 -2.60257 | overlap 1261289 1261288 AGAGGCGAGAACCCA GGCGCACC TTC GGTGCGCT GCACACGTGTGCGCT CBUD_1276a 1261599 - 1261706 + | hypothetical protein TERM 1447 1262129 - 1262110 - g 78 -4.3 -5.08824 | overlap 1262111 GGTGCAGTCAAAAAA CCGATCA TGACTT TGATCGA CTTCAAGCAGCCTTC CBUD_1279 1261924 - 1262571 + | hypothetical protein serS 1263839 - 1262568 - | seryl-tRNA synthetase TERM 1448 1262601 - 1262636 + g 100 -17.6 -3.37935 | overlap 1262604 ACCCATGTAGGACTT CAAGGCGTCGGGCACA CGAA TGTGCCCGTCGGCTTG TTGATAGTTTTCCAT TERM 1449 1262604 - 1262633 + g 100 -13.5 -3.81516 | overlap 1262601 CATGTAGGACTTCAA GGCGTCGGGCACA CGAA TGTGCCCGTCGGC TTGTTGATAGTTTTC TERM 1450 1263636 - 1263647 + g 78 -7.2 -4.55128 | AGCCATTAAGGGTTC GGGG TTTT CCCC TTTTGATTTCGCCAT TERM 1451 1263659 - 1263670 + g 71 -4.4 -4.81685 | CCCCTTTTGATTTCG CCAT TCCA ATGG TTTTTGATAATTGGT CBUD_1280 1265237 - 1263915 - | ATPase, AAA family TERM 1452 1264401 - 1264360 - G 83 -11.7 -3.04792 | gap 1 TCAGCATTTCCAATA TCTTCAC-TCGCCATGCGCA CTA CGCGCCTGGCGACGTAAAAA GGATCGCAGCCACCA lolA 1265856 - 1265221 - | outer-membrane lipoproteins carrier protein TERM 1453 1265653 - 1265641 - G 82 -10.5 -3.64703 | GGTTTCCCAGCGAAA GCGCC CCG GGCGC ATAATCATGACCCGT ftsK 1268204 - 1265868 - | cell division protein TERM 1454 1266444 - 1266472 + gH 78 -7.4 -4.3179 | AATACCAGCCGCCCG CGCTTTTTGCGC CAAAC GCACAATAAGCG TTTCTACTTTTTTCC TERM 1455 1266725 - 1266715 - GH 75 -8.2 -3.80189 | opp_overlap 1266715 1266714 1266712 ACACACCAACGCAAA GCGG CCG CCGC ATCTTTCATATCGGT TERM 1456 1267368 - 1267388 + gH 74 -9.9 -3.22476 | TAATATGGCTGAGCC TTTAAAACG CGG CGTTTTAAA TTCATGATCGATAAT TERM 1457 1267556 - 1267546 - GH 73 -5.4 -4.63044 | AGCGATAGAAATAAA TCCT TCC AGGA AATAGCACCCAATCG TERM 1458 1268140 - 1268101 - GH 71 -4.2 -4.75063 | overlap 1268114 AGAAAAGCCGAAAAA GCCAGCGCCAAAATGAAG CAAC CTTCACGTAGGCGATAAC GCAAATGGCGCCGTA CBUD_1282a 1268191 - 1268313 + | hypothetical protein TERM 1459 1268554 - 1268564 + G 74 -4 -4.92756 | AGCACGCGGAGCGCC TTGA TAC TCAA TTTATTTTTGATCAT trxB 1268328 - 1269290 + | thioredoxin reductase TERM 1460 1270250 - 1270236 - g 73 -7.2 -4.10453 | opp_overlap 1270236 TAAATTCTTCCAAAA TCGTTT ACG AAACGA TTCCCTCATCATTGG CBUD_1284 1269316 - 1270752 + | hypothetical membrane spanning protein infA 1270814 - 1271065 + | bacterial protein translation initiation factor 1 (IF-1) clpA 1273389 - 1271128 - | ATP-dependent clp protease ATP-binding subunit TERM 1461 1271269 - 1271282 + g 80 -3.7 -5.32944 | opp_overlap 1271259, overlap 1271270 AATAAGCCGCGCCAT GGGGC GAGC GCCCA TTTTTTCGTTATAGC TERM 1462 1271270 - 1271281 + g 70 -7.2 -3.78682 | opp_overlap 1271259, overlap 1271269 ATAAGCCGCGCCATG GGGC GAGC GCCC ATTTTTTCGTTATAG TERM 1463 1271918 - 1271908 - G 71 -3.2 -5.06414 | TCCCGCTAATAAAAA CGAT CCT ACCG GCTTATCTGCATTAT CBUD_1286a 1273422 - 1273622 + | hypothetical membrane associated protein CBUD_1287 1273712 - 1274248 + | hypothetical cytosolic protein CBUD_1287a 1274282 - 1274380 + | hypothetical protein icd 1275703 - 1274417 - | isocitrate dehydrogenase [NADP] TERM 1464 1275090 - 1275108 + g 85 -7.4 -4.86731 | overlap 1275091 TTAATCCCTATCCCC GCCGTTTC CGG GAAACGGA TTTTCTTTACGCCCA TERM 1465 1275091 - 1275107 + g 83 -10.9 -3.51557 | overlap 1275090 TAATCCCTATCCCCG CCGTTTC CGG GAAACGG ATTTTCTTTACGCCC queA 1276778 - 1275747 - | S-adenosylmethionine:tRNA ribosyltransferase-isomerase TERM 1466 1276923 - 1276943 + G 70 -7.7 -3.61398 | opp_overlap 1276923 CTCGCGGCTGGGAAA TAGGAAAAC AAA GTTTTTCTA TTATTAGAGCGAACA TERM 1467 1277156 - 1277178 + G 74 -7 -4.25256 | GCTTTTTGTAATGCC GCCTTTATGG CTT CTATAATGGC TTATTTTGATCAACG CBUD_1290 1276895 - 1277746 + | hypothetical membrane spanning protein CBUD_1291 1277810 - 1279462 + | ferredoxin-dependent glutamate synthase TERM 1468 1280524 - 1280539 + G 93 -11.8 -3.57462 | opp_overlap 1280535 GCTTTCAGGCGTTCG GGCGGG ACAA CCCGCC TTTGACGATGAAGTA CBUD_1292 1279466 - 1280842 + | succinate-semialdehyde dehydrogenase [NADP+] CBUD_1293 1282322 - 1280943 - | delta(24(24(1)))-sterol reductase TERM 1469 1281513 - 1281494 - G 82 -5.8 -5.00884 | ATTTTTCGTAAAAAA TATCCCAA GTCG TTGGAATA CATTCTTCGCCTTTC CBUD_1294 1282492 - 1282340 - | hypothetical protein TERM 1470 1282527 - 1282501 - H 76 -10.8 -2.62111 | opp_overlap 1282516 1282522, overlap 1282500 1282498 1282516 1282524 CCTGCAAAAAAGTAG CCCGTATGCAGC GAA GCGGAATACGGG AGAACTATAAGATTT TERM 1471 1282555 - 1282516 - H 72 -9.4 -3.07816 | gap 1, opp_overlap 1282516 1282522, overlap 1282501 1282500 1282498 1282524 CCCGTATGCAGCGAA GCGGAATACGGGAGAA-CT ATA AGATTTCCCCGTATTTCGC TTCGCTGCATACGGG TERM 1472 1282516 - 1282555 + H 81 -11.6 -3.07816 | gap 1, opp_overlap 1282501 1282500 1282498 1282516 1282524, overlap 1282522 CCCGTATGCAGCGAA GCGGAATACG-GGAGAACT ATA AGATTTCCCCGTATTTCGC TTCGCTGCATACGGG TERM 1473 1282633 - 1282619 - H 81 -2.8 -5.64421 | overlap 1282592 AGCTTAAACAAAAAA GTGC GGCCTTG GCAC GATTGTCGTGTAGGA CBUD_1295 1282719 - 1283957 + | multidrug transporter CBUD_1296 1285511 - 1283970 - | hypothetical membrane spanning protein CBUD_1297 1288413 - 1285870 - | hypothetical cytosolic protein TERM 1474 1286956 - 1286966 + g 81 -5.4 -5.11881 | AACGCCTGGGCTTAT TTGC GAG GCAA TTCTTTTTTTTGTTT TERM 1475 1287089 - 1287116 + g 78 -5.5 -4.95806 | opp_overlap 1287090, overlap 1287090 CCCTCTAACACAGTA ACACGCTGTCG TCGATT CCACAGCGTGC TTTTTGTAATGATTT TERM 1476 1287115 - 1287090 - G 71 -9 -3.37493 | opp_overlap 1287089 1287090 CCTCTAACACAGTAA CACGCTGTCG TCGATT CCACAGCGTG CTTTTTGTAATGATT TERM 1477 1287090 - 1287115 + g 73 -9 -3.55857 | opp_overlap 1287090, overlap 1287089 CCTCTAACACAGTAA CACGCTGTCG TCGATT CCACAGCGTG CTTTTTGTAATGATT TERM 1478 1287303 - 1287328 + g 72 -7.6 -3.87318 | opp_overlap 1287299 1287303 CTTCTAACACAGTAA TACGCTGTCG TCGATT CCACAGCGTA TTTCGTGTAATGCTT TERM 1479 1287411 - 1287433 + g 84 -5.5 -5.31877 | gap 1, opp_overlap 1287411, overlap 1287413 CTTCTAACACAGTAA CACGCTGTCG TCGC CG-CAGCGCG TTTTTTGTAATGGCT TERM 1480 1287841 - 1287853 + g 75 -3.3 -5.08824 | overlap 1287838 1287836 1287845 CACCGTAACGCGCTG TCCTC GCA GTGGA TTTTTTCGATACCAC TERM 1481 1288275 - 1288300 + g 84 -5.3 -5.31877 | gap 1, opp_overlap 1288277, overlap 1288277 CTGCTAACACCGTAA CACGCTGTCGTC GTT GTCG-CAGCGCG TTTTTTGTAATGGCT TERM 1482 1288575 - 1288603 + H 73 -7.3 -4.06687 | TCTACCAAAGCCGTA GCCCGTATTTCGC TTC GCTCCATACGGGC TTCTTTCTAAGGAGT TERM 1483 1290018 - 1289983 - gH 79 -7 -4.65895 | opp_overlap 1289984 1289991 1290012, overlap 1289984 1289990 1289991 GCGCGCACTCAAAAA CCAAAAACGCTAAAGT TATT ACTTCAGCATTTTCGT TGTCGAGAATCAATT TERM 1484 1290017 - 1289984 - gH 78 -10.5 -3.39216 | opp_overlap 1289984 1289991 1290012, overlap 1289983 1289990 1289991 CGCGCACTCAAAAAC CAAAAACGCTAAAGT TATT ACTTCAGCATTTTCG TTGTCGAGAATCAAT TERM 1485 1290011 - 1289990 - gH 85 -5.9 -5.18355 | opp_overlap 1289984 1289991, overlap 1289984 1289983 1289991 CTCAAAAACCAAAAA CGCTAAAGT TATT ACTTCAGCA TTTTCGTTGTCGAGA TERM 1486 1290391 - 1290403 + GH 74 -10.5 -2.60723 | overlap 1290390 AAGTTCACTTCCTTT GCGCC ATC GGCGC CTTCGTTCCCGCTCA TERM 1487 1290804 - 1290790 - g 76 -2.8 -5.40072 | TTTTGGGGAAAAAAA CAAAGT ACT ACTTGG AAAAGCTTAGAAAAG CBUD_1298 1288705 - 1290885 + | ankyrin repeat protein CBUD_1298a 1290765 - 1290902 + | hypothetical cytosolic protein CBUD_1299 1293168 - 1290964 - | hypothetical protein CBUD_1299a 1293438 - 1293304 - | hypothetical protein CBUD_1303 1296688 - 1295570 - | hypothetical cytosolic protein TERM 1488 1295632 - 1295596 - G 100 -14.7 -4.04209 | opp_overlap 1295596 1295601, overlap 1295599 CTAAATCATTAGAAA GAACACTTGAGTTCTCT TGA AGAGAATTCAAATGTTC AGCATAAAAATGTTG TERM 1489 1295629 - 1295599 - G 91 -10.6 -4.12857 | opp_overlap 1295596 1295601, overlap 1295596 AATCATTAGAAAGAA CACTTGAGTTCTCT TGA AGAGAATTCAAATG TTCAGCATAAAAATG purC 1297411 - 1296689 - | phosphoribosylaminoimidazole-succinocarboxamide synthase CBUD_1305 1298004 - 1297411 - | hypothetical membrane spanning protein dapA 1298914 - 1298021 - | dihydrodipicolinate synthase kdgK 1300111 - 1299116 - | 2-dehydro-3-deoxygluconokinase TERM 1490 1299180 - 1299196 + gH 95 -9.4 -4.57837 | opp_overlap 1299168 TAAGCGACCACGGTA GCCGCT AAATG AGCGGC TTTTTGGGAGGCTGT TERM 1491 1299787 - 1299807 + gH 74 -8.9 -3.53012 | opp_overlap 1299788, overlap 1299788 TACGAATTAAATATA ACCCCGGCA ACT TGTCGGGGA TTTGGCGAACCAGGG TERM 1492 1299806 - 1299788 - GH 89 -10.2 -3.90901 | opp_overlap 1299788 1299787 ACGAATTAAATATAA CCCCGGCA ACT TGTCGGGG ATTTGGCGAACCAGG TERM 1493 1299788 - 1299806 + gH 88 -12.4 -2.71712 | opp_overlap 1299788, overlap 1299787 ACGAATTAAATATAA CCCCGGCA ACT TGTCGGGG ATTTGGCGAACCAGG TERM 1494 1300331 - 1300316 - gR 72 -7.6 -3.78904 | overlap 1300325 GAGCAAATCGAACAA CGTCAA CGAT TTGACG AATATCAAATAAAAA TERM 1495 1300863 - 1300853 - gR 74 -4 -4.93968 | overlap 1300846 ATCCACAACGAAAAA CTTT CGG AAAG CGAGCGGGCGCAAGC CBUD_1309 1300061 - 1301380 + | RmuC family protein TERM 1496 1301460 - 1301444 - TR 100 -12.3 -6.04324 | opp_overlap 1301444 GGAAAAAACAAAAAA GCCAGGT AAA ACCTGGC TTTTTTGCTATAAAA TERM 1497 1301444 - 1301460 + Tr 100 -12.3 -5.21709 | opp_overlap 1301444 GGAAAAAACAAAAAA GCCAGGT AAA ACCTGGC TTTTTTGCTATAAAA CBUD_1310 1302702 - 1301794 - | 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase TERM 1498 1302618 - 1302594 - G 78 -5.8 -4.83615 | overlap 1302597 TACCGTGGATAAAAA GA-ACCGGCTCA CCT TG-GCCGGTCTC GATATAGTGCATCTT TERM 1499 1302614 - 1302597 - G 82 -7.7 -4.52873 | gap 1, overlap 1302594 CGTGGATAAAAAGAA CCGGCTCA CCT TG-GCCGG TCTCGATATAGTGCA CBUD_1311 1307579 - 1302699 - | NAD-specific glutamate dehydrogenase TERM 1500 1303742 - 1303718 - G 74 -4.3 -4.92385 | overlap 1303719 TATAGGCAAATAAAA CGCTTAACTCA GGT CGAGTTAAACC AAGACCGAGCGCACG TERM 1501 1308301 - 1308291 - g 79 -8.2 -4.18697 | opp_overlap 1308291 1308288 AAAATTACTGGAAAA CGCG GGG CGCG TCATTTCACGAGAAC qseB 1307767 - 1308465 + | transcriptional regulatory protein TERM 1502 1308607 - 1308595 - g 71 -9.1 -3.34895 | TGGATGCTCAATTAA TCGGC TCA GCCGA ACGCACACGGGCCTT qseC 1308462 - 1309898 + | sensor protein TERM 1503 1310594 - 1310615 + G 70 -5.9 -4.30978 | opp_overlap 1310599 CCCATTTAAAGCTAC CCAAACAAA TAAT TTTGATTGG TTTTGATGAATTAGC TERM 1504 1312008 - 1311997 - g 78 -7.2 -4.54253 | AAACCATTAAATAAA CCCC ATAC GGGG CTAAACGGGATAGAG CBUD_1314 1310098 - 1312716 + | ATP-dependent nuclease subunit B TERM 1505 1312981 - 1312964 - g 75 -5.5 -4.84359 | TGACTCCCACAAAAA GCTTACG TGGA CGTTAGC CAGAAAAGTTATCGA TERM 1506 1313695 - 1313684 - g 75 -2.2 -5.38326 | TCAATTAAATAAAAA CGAA AAGC TCCG ACTGGCGTTGAACGA TERM 1507 1314200 - 1314170 - g 81 -4 -5.40072 | opp_overlap 1314176, overlap 1314179 TCGCTCTCAAAAAAA TTTAATCGATTGGT TTA ACCAAACGTTTGAA CCCACTTTTCCCAAA CBUD_1315 1312713 - 1316045 + | ATP-dependent nuclease subunit A TERM 1508 1316125 - 1316135 + T 70 -5.4 -4.44748 | CAATTAGGCGTTCAT TTGC TTT GCAA TTATTTTGATTTTGT CBUD_1316 1316889 - 1316191 - | hypothetical membrane associated protein TERM 1509 1316761 - 1316775 + g 100 -5.6 -5.77853 | ATATTTTTTTCCAGC GGAGGG AAG CACTCC TTTTTTTTCAAGGTT TERM 1510 1317093 - 1317141 + G 100 -15.5 -3.14931 | opp_overlap 1317093 1317098 1317125, overlap 1317098 GGTAGCCCGTATGAA GCGAAGCGAAATACGGGGA AATGATGAAAA TTCCCGTATTCCGCTTCGC TTCATACGGGCTACC TERM 1511 1317141 - 1317093 - g 100 -16.3 -3.14931 | gap 1, opp_overlap 1317093 1317098, overlap 1317098 1317125 GGTAGCCCGTATGAA GCGAAGCGAAATACGGGGAAAT GATGAA AATT-CCCGTATTCCGCTTCGC TTCATACGGGCTACC CBUD_1317 1317088 - 1317213 + | hypothetical protein TERM 1512 1317607 - 1317633 + G 87 -5.1 -5.4505 | gap 1 ACGTGAGAAAAGCTT TAGAGGCCGGTC ACGC GGC-GGCCACTA TTTTTTCTTCCGCAA TERM 1513 1317692 - 1317702 + G 77 -4.6 -5.07652 | overlap 1317679 1317678 TCGCATTGCCTTTGA TGGC GAT GCCG TTTTATTTTCAGACG CBUD_1318 1317210 - 1318112 + | 5'-nucleotidase TERM 1514 1318995 - 1319012 + G 90 -2 -5.95539 | opp_overlap 1318995, overlap 1318996 1319004 CGGTAGCCGATTATA TCTCTT ATTTAA AAGAGG TTTTTTTATTTGACG TERM 1515 1319204 - 1319191 - g 75 -5.3 -4.788 | AAAGCAACGCAAAAA GGAAA TTTA TTTCC ATCGAAGCCATAAAG CBUD_1319 1318175 - 1319461 + | hypothetical ATPase orn 1319620 - 1320171 + | oligoribonuclease CBUD_1320a 1320348 - 1320440 + | hypothetical protein CBUD_1321 1321013 - 1320621 - | PIN domain protein CBUD_1322 1321270 - 1321016 - | transcriptional regulator, CopG family CBUD_1323 1321415 - 1321996 + | hypothetical membrane spanning protein TERM 1516 1322024 - 1322061 + T 100 -23.6 -4.20084 | gap 1, overlap 1322028 GTAATTCTAATTTTG GCATCGTCGTCCCGCGG CTTGA CCGCGGGACGACG-TGC TTTTAGCTGCCTAGT TERM 1517 1322028 - 1322058 + T 100 -24.1 -3.11476 | overlap 1322024 TTCTAATTTTGGCAT CGTCGTCCCGCGG CTTGA CCGCGGGACGACG TGCTTTTAGCTGCCT gcp 1323091 - 1322072 - | O-sialoglycoprotein endopeptidase mdh 1324086 - 1323100 - | malate dehydrogenase TERM 1518 1324275 - 1324250 - R 85 -8.9 -4.21184 | opp_overlap 1324267, overlap 1324247 1324251 1324253 AAGACAGACAAAGAA GCACCTCCGGC TTTA GCCGGAGGTTG GAGAGTTAACTTTCG TERM 1519 1324274 - 1324251 - R 85 -12.4 -3.11084 | opp_overlap 1324267, overlap 1324247 1324250 1324253 AGACAGACAAAGAAG CACCTCCGGC TTTA GCCGGAGGTT GGAGAGTTAACTTTC TERM 1520 1324272 - 1324253 - R 100 -15 -3.09925 | opp_overlap 1324267, overlap 1324247 1324251 1324250 ACAGACAAAGAAGCA CCTCCGGC TTTA GCCGGAGG TTGGAGAGTTAACTT CBUD_1326 1325528 - 1324281 - | long-chain fatty acid transport protein precursor TERM 1521 1324556 - 1324544 - G 81 -4.1 -5.26119 | overlap 1324539 TTCCTAAAAAGAAAA TCCAA TTC TCGGA AGGGGCATATCTTCC TERM 1522 1325515 - 1325504 - G 75 -2.2 -5.41359 | overlap 1325511 AAGTAAAGGAAAAAA CCAA TATT CTGG CTACAGATCGCATAG TERM 1523 1325832 - 1325844 + G 76 -6.9 -4.57569 | opp_overlap 1325818, overlap 1325820 1325827 AGACGAACGCGCGCA GGTGC GTT GCGCC TTTTTCCGCAACTAC TERM 1524 1326741 - 1326730 - g 75 -7.2 -4.371 | opp_overlap 1326730 1326729 CTCACCACATTAAAA CGCG GCTA CGCG ATTGTGACGCATCAA xseA 1325641 - 1326885 + | exodeoxyribonuclease VII large subunit TERM 1525 1327472 - 1327458 - g 100 -11.4 -4.37886 | opp_overlap 1327470 TTATTTGCGAGAAAA TCGCGC GGA GCGCGA GAAGATATTCGTCTT CBUD_1328 1326882 - 1328417 + | multidrug resistance protein B engA 1329888 - 1328557 - | GTP-binding protein TERM 1526 1330098 - 1330110 + r 81 -5.5 -5.06816 | opp_overlap 1330085 1330092 1330098 TACCAGGAATAAAAA TACCC CCG GGGTG TTTTTATTGCGAAAT TERM 1527 1330110 - 1330098 - R 72 -3.3 -5.15167 | opp_overlap 1330098, overlap 1330085 1330092 TACCAGGAATAAAAA TACCC CCG GGGTG TTTTTATTGCGAAAT CBUD_1331 1330734 - 1330114 - | hypothetical protein TERM 1528 1330580 - 1330569 - G 72 -7.2 -4.06491 | opp_overlap 1330568 1330569 1330572, overlap 1330570 GCAATTGCATATAAA GCGC AGAA GCGC GTTCTGTTTTCTCCA TERM 1529 1330683 - 1330662 - G 73 -8.7 -3.40907 | opp_overlap 1330661, overlap 1330664 CGATAGCAAGAGCAA TAGCGCGAC CATA ATCGCGCCA CCATTTTTTTATCAT TERM 1530 1330681 - 1330664 - G 71 -9.1 -3.26933 | opp_overlap 1330661, overlap 1330662 ATAGCAAGAGCAATA GCGCGAC CATA ATCGCGC CACCATTTTTTTATC hisS 1332022 - 1330757 - | histidyl-tRNA synthetase CBUD_1333 1332810 - 1332019 - | integral membrane protein CBUD_1334 1332907 - 1332767 - | hypothetical protein CBUD_1335 1332890 - 1333648 + | Fic family protein TERM 1531 1333728 - 1333716 - TR 75 -7.7 -4.07568 | opp_overlap 1333716, overlap 1333724 TGCGGTGCTCGAAAA TCAGC GAA GCTGA CTCAGCATAGCGAAT CBUD_1336 1334868 - 1333756 - | radical SAM family enzyme TERM 1532 1336136 - 1336126 - R 93 -6.8 -5.45802 | overlap 1336127 1336128 CCTCCAAAACAAAAA GGGT GAA ACCC CACTGGAAACTACGG TERM 1533 1336498 - 1336460 - R 71 -4.9 -4.48664 | overlap 1336456 GAAATACACAACAAA TTTTTCAGTAAAAAA GCGCATAAA TTTTTAACTGAAAAA TTAGAGCAGGTCTAC TERM 1534 1337493 - 1337503 + r 76 -4.6 -5.06414 | opp_overlap 1337481 AAAGCTTAAGAAAAG CGCC ATC GGTG TTTTTCTTAGCCCCC CBUD_1339 1338424 - 1337621 - | dimethylallyltransferase CBUD_1340 1338456 - 1338572 + | hypothetical protein TERM 1535 1338807 - 1338796 - g 88 -3 -5.75342 | TTTTGCGAAAAAAAA GAAA CGGC TTTC GTCGAATGGGCTTTT CBUD_1341 1338565 - 1338969 + | hypothetical cytosolic protein ndk 1339390 - 1338971 - | nucleoside diphosphate kinase nhaP.2 1339526 - 1341124 + | Na+/H+ antiporter TERM 1536 1341186 - 1341231 + F 95 -14.2 -3.09516 | opp_overlap 1341186, overlap 1341192 GCCCGTATGAGCGAA GCGAAATACGGGGACGATAG ACATCA TTGTTTTCCCCGTATTTCGC TTCGCTCATACGGGC TERM 1537 1341677 - 1341689 + G 81 -5.5 -5.1244 | opp_overlap 1341677 1341675, overlap 1341675 AATCATATAATAATA CCAGT GGT GCTGG TTTTTATGTTCGTGG CBUD_1344 1341577 - 1342323 + | OmpA-like transmembrane domain protein TERM 1538 1342365 - 1342335 - f 70 -9.1 -3.18134 | opp_overlap 1342343, overlap 1342333 1342337 1342343 CTAAGGAACTTAACA CACAAAAAGGGGC TTCGT GCCCCTTTTTTTA TATTCCCACATACGA TERM 1539 1342363 - 1342337 - f 73 -9.5 -3.14636 | opp_overlap 1342343, overlap 1342335 1342333 1342343 AAGGAACTTAACACA CAAAAAGGGGC TTCGT GCCCCTTTTTT TATATTCCCACATAC TERM 1540 1342343 - 1342357 + F 100 -8.5 -5.80817 | opp_overlap 1342337 1342335 1342333 1342343 CTTAACACACAAAAA GGGGC TTCGT GCCCC TTTTTTTATATTCCC TERM 1541 1342357 - 1342343 - f 90 -8.5 -5.10064 | opp_overlap 1342343, overlap 1342337 1342335 1342333 CTTAACACACAAAAA GGGGC TTCGT GCCCC TTTTTTTATATTCCC TERM 1542 1342439 - 1342451 + G 70 -5.5 -4.41494 | AAGTTTTTACATTCC CGGCT ATC AGCTG TTTTCCTTGCCACTA CBUD_1345 1342421 - 1343677 + | D-alanyl-D-alanine serine-type carboxypeptidase CBUD_1346 1343674 - 1343937 + | hypothetical protein CBUD_1347 1343961 - 1344347 + | hypothetical membrane associated protein TERM 1543 1344562 - 1344585 + F 77 -6.2 -4.60487 | gap 1 AGCTTCCTTCTTCCG GAAATCG-TAT GGA ATATCGATTTC TTTTTCCAACTCCTG TERM 1544 1344967 - 1344942 - f 77 -7.7 -4.2828 | opp_overlap 1344945 CCTTACTCAGTAAAA TAATGACACCA TGAA CGATGTCATTA TTCGCCAGTTAGCTC lipB 1344952 - 1345680 + | lipoate-protein ligase B lipA 1345610 - 1346557 + | lipoic acid synthetase TERM 1545 1348344 - 1348357 + G 75 -5.2 -4.90917 | overlap 1348338 CAGCTATAAACCGGA GCGG CATTTC CCGC TTTTTCCTTGGCTTT CBUD_1352 1346668 - 1348716 + | phosphatase scvA 1348760 - 1348852 + | ScvA TERM 1546 1348880 - 1348905 + T 100 -16.3 -2.62735 | overlap 1348869 TAGTTGAGTTGTCGA TTTCCCCCTGA GCTT TCAGGGGGAAA TCCTATAGACCGTAT CBUD_1353 1349981 - 1348908 - | hypothetical protein CBUD_1354 1350479 - 1349988 - | acyl-CoA hydrolase CBUD_1357 1350634 - 1350906 + | hypothetical protein TERM 1547 1351002 - 1351016 + F 75 -7.8 -4.07687 | GCGATTCATTCCGCG GCGCTC AAT GAGTGC TTTTAACCACAGACT TERM 1548 1352113 - 1352125 + F 74 -4.7 -4.86731 | overlap 1352108 GCATAAGTCCTGGAA GGGGC ATG GCACC TTTTATTTGCAAAGA TERM 1549 1352887 - 1352873 - f 71 -7.2 -3.86897 | TTTATCGGGTATAAA TCGATT AAA AATCGA TAACGCGTAAATTAA TERM 1550 1352991 - 1353009 + F 76 -2.3 -5.42605 | CTATTTAATCCCAGG CGAGCGA TTTTT TCGTACG TTTTGTTTTTATTAA TERM 1551 1353061 - 1353045 - f 93 -11.5 -4.18018 | GCCCCGTACGCAAAA GCGAGCG CAA CGCCCGC AACACCTCGATATAA TERM 1552 1353532 - 1353575 + F 73 -7.6 -3.97042 | gap 1, opp_overlap 1353532, overlap 1353543 CCTCAGAAAAAATCA GCGGCTTTG-CGTTTTCTTTG AGC CAAAGAAAATGTTCAAGGCGC TTTGCTTCCTCGTAC TERM 1553 1353543 - 1353563 + F 72 -9.9 -3.0264 | opp_overlap 1353532, overlap 1353532 ATCAGCGGCTTTGCG TTTTCTTTG AGC CAAAGAAAA TGTTCAAGGCGCTTT TERM 1554 1354092 - 1354078 - f 71 -4.2 -4.94992 | overlap 1354079 CGAAATCGACAAAAA CCGGAT GTG ATCCGT GCGCGATGATGTTTT TERM 1555 1354971 - 1355013 + F 100 -16.4 -4.62336 | opp_overlap 1354975, overlap 1354975 TCCATTGTTTTCCAG AAAAGTAGCCCGTATTCCGC TAC GCAGAATACGGGCTACTTGC TTTTTAGCATGCGGT TERM 1556 1355009 - 1354975 - f 100 -23.8 -4.36914 | opp_overlap 1354971 1354975 TTGTTTTCCAGAAAA GTAGCCCGTATTCCGC TAC GCAGAATACGGGCTAC TTGCTTTTTAGCATG TERM 1557 1354975 - 1355009 + F 100 -21.6 -3.81926 | opp_overlap 1354975, overlap 1354971 TTGTTTTCCAGAAAA GTAGCCCGTATTCCGC TAC GCAGAATACGGGCTAC TTGCTTTTTAGCATG CBUD_1359a 1355325 - 1355762 + | hypothetical protein TERM 1558 1355843 - 1355857 + F 75 -10 -3.08992 | opp_overlap 1355842 1355839 1355838 ATGGCATAAATTCAC CTGCTC CCG GAGCAG TGTGTTGAACTGAAT CBUD_1362 1355885 - 1357147 + | pyrophosphate--fructose 6-phosphate 1-phosphotransferase CBUD_1363 1357631 - 1357149 - | hypothetical protein rspA 1358833 - 1357625 - | starvation sensing protein TERM 1559 1358574 - 1358557 - G 70 -7.7 -3.63627 | CTTTGATATCCCAAA GCGCCAT ATCG ATAGCGC CAATAGCTGACATCG TERM 1560 1358602 - 1358617 + g 70 -7.5 -3.89501 | TCGTCACTGGACCGC GGCGC CAATAA GCGCC TTTATAAAAATATTG CBUD_1365 1359670 - 1358864 - | short chain dehydrogenase TERM 1561 1359028 - 1359014 - G 100 -12.8 -3.41693 | opp_overlap 1359013 CTCAGGATGAATCAA GCGCCC AGA GGGCGC GTAGGTTGGCGGAAT eda 1359733 - 1360440 + | 2-dehydro-3-deoxyphosphogluconate aldolase TERM 1562 1360806 - 1360796 - g 74 -6.8 -4.27796 | opp_overlap 1360801 1360802 CAAGAAATTGCAAAA GCCT ACC AGGC GGAATGCACGCCTGA TERM 1563 1360801 - 1360821 + G 80 -3.9 -5.36364 | opp_overlap 1360796, overlap 1360802 AATTGCAAAAGCCTA CCAGGCG GAATGCA CGCCTGA TTTTTATGTTTTTGA TERM 1564 1360802 - 1360820 + G 70 -7.4 -3.79378 | opp_overlap 1360796, overlap 1360801 ATTGCAAAAGCCTAC CAGGCG GAATGCA CGCCTG ATTTTTATGTTTTTG CBUD_1367 1360451 - 1361008 + | thiol-disulfide isomerase or thioredoxin TERM 1565 1361409 - 1361419 + G 82 -3.2 -5.47399 | CGGAGTTGTTCTCTT TTGC CTT GCGA TTTTTTTAACCTTGC exoD 1360996 - 1361598 + | exopolysaccharide synthesis protein CBUD_1368a 1361644 - 1361766 + | hypothetical cytosolic protein TERM 1566 1361806 - 1361826 + T 72 -3.1 -5.09426 | GTTGACGCCTATGCG CCTTCGCGG GGA CAACGAGGG TTTTTTAAAATTAAG greA 1362453 - 1361932 - | transcription elongation factor CBUD_1369a 1362528 - 1362914 + | hypothetical protein TERM 1567 1362936 - 1362959 + T 100 -9.6 -5.28778 | opp_overlap 1362936 1362938 1362940 ATAACTTTAACGATA GACAGCCC ATCCCCTC GGGCTGTC TTTTTTATAAATCCT TERM 1568 1362959 - 1362936 - T 75 -10.3 -2.92513 | opp_overlap 1362936, overlap 1362938 1362940 ATAACTTTAACGATA GACAGCCCA TCCCCT CGGGCTGTC TTTTTTATAAATCCT carB 1366185 - 1362964 - | carbamoyl-phosphate synthase large chain TERM 1569 1363380 - 1363402 + g 74 -9.2 -3.30124 | CCCCTGCCAATTGTC CTTTGGCAAA GGC TTGGCCAAAG TTCTCCGCAATGCCC carA 1367475 - 1366267 - | carbamoyl-phosphate synthase small chain TERM 1570 1367923 - 1367935 + G 76 -6.9 -4.54821 | GCCGGATTATTCAAG GCGTC GGA GGCGC TTTTATGATTCCGGT CBUD_1372 1367544 - 1369148 + | multidrug resistance protein B TERM 1571 1369242 - 1369185 - f 100 -15.4 -3.7557 | gap 2, opp_overlap 1369203 1369207, overlap 1369186 1369203 CCGAAAAACCAAATA CTCATCTCACTGGACAAATTTGTCCAGT GATC ACTAGACAAATTTGTCCAGT--GATGAT AGGGTATATCGATGC TERM 1572 1369244 - 1369186 - f 100 -20.1 -2.84257 | gap 1, opp_overlap 1369203 1369207, overlap 1369185 1369203 CGAAAAACCAAATAC TCATC-TCACTGGACAAATTTGTCCAGT GATC ACTAGACAAATTTGTCCAGTGATGATAG GGTATATCGATGCTA TERM 1573 1369226 - 1369203 - f 79 -9 -3.89524 | opp_overlap 1369203 1369207, overlap 1369185 1369186 ATCTCACTGGACAAA TTTGTCCAGT GATC ACTAGACAAA TTTGTCCAGTGATGA TERM 1574 1370185 - 1370172 - g 78 -2.3 -5.46657 | GACCCTAACAAAAAA CAAGG TTAC CCTAG AAAAGATCGAAAATT CBUD_1373 1369254 - 1370564 + | hypothetical ATPase TERM 1575 1370607 - 1370627 + G 73 -2.5 -5.14163 | overlap 1370602 1370610 TACTCATTATCGCCA TGGTGGCCT GTT ACGCCATTA TTTTTATTGATGAAT TERM 1576 1371266 - 1371279 + G 100 -8.1 -5.54907 | GTTTGTTTTGCGGTG GCGCT AATT AGCGC TTTTTATTTTGTAAA CBUD_1374 1370561 - 1371919 + | multidrug resistance protein B TERM 1577 1371980 - 1371924 - f 100 -17.8 -3.89524 | gap 1, opp_overlap 1371928 1371940, overlap 1371895 1371927 AGGTTAGGTGACAAA TCA-GCCATTACCCAAATTTGGGTAAT GGTC ATTGCCCAAATTTAGGTAATGGCATAA AATATATTCATGGAC TERM 1578 1371976 - 1371927 - f 100 -23.3 -3.01918 | opp_overlap 1371928 1371940, overlap 1371895 1371924 TTAGGTGACAAATCA GCCATTACCCAAATTTGGGTAAT GGTC ATTGCCCAAATTTAGGTAATGGC ATAAAATATATTCAT TERM 1579 1371928 - 1371951 + F 91 -14 -2.7186 | opp_overlap 1371927 1371924, overlap 1371940 TAGGTGACAAATCAG CCATTACCCA AATT TGGGTAATGG TCATTGCCCAAATTT TERM 1580 1371940 - 1371963 + F 76 -9 -3.68529 | opp_overlap 1371927 1371924, overlap 1371928 CAGCCATTACCCAAA TTTGGGTAAT GGTC ATTGCCCAAA TTTAGGTAATGGCAT TERM 1581 1372905 - 1372924 + G 72 -7.9 -3.78775 | opp_overlap 1372904 1372921 TTATCTACAATGGAT GCGCTTT TTATTC AAAGCGC TTTGCTGCTCGACAA CBUD_1375 1371990 - 1373372 + | hypothetical ATPase CBUD_1376 1375191 - 1373416 - | hypothetical cytosolic protein TERM 1582 1375264 - 1375293 + r 72 -8.7 -3.57144 | opp_overlap 1375271 1375272, overlap 1375271 1375272 TTCTTAGAAGAAAGT TAAGAAACCCTGC TGAT GCAGGCTTTTTTA TTTGGAAGTGAAGAA TERM 1583 1375271 - 1375286 + r 89 -4.6 -5.63517 | opp_overlap 1375271 1375272, overlap 1375264 1375272 AAGAAAGTTAAGAAA CCCTGC TGAT GCAGGC TTTTTTATTTGGAAG TERM 1584 1375272 - 1375285 + r 75 -8.1 -3.97026 | opp_overlap 1375272 1375271, overlap 1375271 1375264 AGAAAGTTAAGAAAC CCTGC TGAT GCAGG CTTTTTTATTTGGAA dnaJ 1376418 - 1375291 - | chaperone protein TERM 1585 1376413 - 1376424 + g 71 -2.2 -5.08255 | GTAATAATCGCGTTT TGCC ATGA GGTA TTTTATTTTCCAAGT TERM 1586 1376479 - 1376518 + r 81 -11.5 -3.05384 | opp_overlap 1376479 GCCCGTATGAGCGAA GCGAAATACGGGGAGAC AACATG GAATTCCCGTATTTCGC TTCGCTCCAGACGGG dnaK 1378531 - 1376561 - | chaperone protein TERM 1587 1376684 - 1376698 + g 86 -7 -5.0538 | overlap 1376682 1376686 GCCTCCCGGAGGAGC GCCGGC AGC GCCGCC TTTTTTAGCATACAC TERM 1588 1378993 - 1379014 + G 70 -7.3 -3.80573 | CGGGCGCCGTGGGCT TGAGCGC CAAGGTCA GCGCTCA TTTGGTCATCCTGCA CBUD_1379 1378697 - 1379290 + | hypothetical protein CBUD_1380 1379293 - 1380690 + | ankyrin repeat protein TERM 1589 1380720 - 1380699 - T 100 -10.9 -5.80364 | overlap 1380701 ATTTTAAGAAAAAAA TCTCTGGCG CTTA CGCCAGAAA CAAGAGCGAGTCGCC TERM 1590 1380718 - 1380701 - T 81 -11.3 -3.0287 | overlap 1380699 TTTAAGAAAAAAATC TCTGGCG CTTA CGCCAGA AACAAGAGCGAGTCG TERM 1591 1380768 - 1380724 - T 73 -7.2 -4.07877 | gap 2, opp_overlap 1380740, overlap 1380726 1380740 TTACGCCAGAAACAA GAGCGAGTCGCCAAAAGGGAGC ATT GTTCCCTTTTGGCGGTTC-C-C GAAGGCAAAATTCAA TERM 1592 1380768 - 1380726 - T 95 -13.4 -3.63097 | opp_overlap 1380740, overlap 1380724 1380740 ACGCCAGAAACAAGA GCGAGTCGCCAAAAGGGAGC ATT GTTCCCTTTTGGCGGTTCCC GAAGGCAAAATTCAA TERM 1593 1380740 - 1380754 + T 77 -7.8 -4.14392 | opp_overlap 1380740 1380724 1380726 AGCGAGTCGCCAAAA GGGAGC ATT GTTCCC TTTTGGCGGTTCCCG TERM 1594 1380816 - 1380795 - T 80 -6.5 -4.7416 | opp_overlap 1380795 TCAAAATCGGAAAAA TCTCGGTCA CTTG CGGCCGAGA TTTTTATCCCGCCAC TERM 1595 1380795 - 1380816 + T 84 -8 -4.82901 | opp_overlap 1380795 TCAAAATCGGAAAAA TCTCGGTC ACTTGC GGCCGAGA TTTTTATCCCGCCAC grpE 1381446 - 1380820 - | GrpE CBUD_1382 1381878 - 1381501 - | hypothetical protein CBUD_1383 1382146 - 1381868 - | hypothetical membrane associated protein CBUD_1384 1382207 - 1383106 + | ATP-NAD kinase TERM 1596 1384574 - 1384560 - gT 75 -5.7 -4.58283 | GAACTCGGCGAAAAA GCACA GGTGT TGTGC ATCACGCATTTGCCA recN 1382955 - 1384781 + | DNA repair protein TERM 1597 1384831 - 1384864 + T 83 -8.9 -4.07618 | gap 1, opp_overlap 1384831 GGGCCCGGTAGCTAA GTAGCCCGTATTTCGC TTC GCTCA-TACGGGCTAC TTTACTTGTTGAAAA TERM 1598 1385249 - 1385237 - T 71 -6.3 -4.25104 | opp_overlap 1385236 CTGTGCTGATTAAAA GATTC CAG GAATC ATTAGGTCTTTGAGA CBUD_1388 1387216 - 1386869 - | hypothetical protein fur 1387694 - 1387257 - | ferric uptake regulation protein omlA 1387821 - 1388165 + | outer membrane lipoprotein CBUD_1390 1388451 - 1388146 - | hypothetical cytosolic protein CBUD_1392 1388888 - 1388448 - | oligoketide cyclase/lipid transport protein TERM 1599 1389312 - 1389294 - g 93 -11.8 -3.71917 | ATGTCAAAGTTGAAA TTGCCCTT GCA AAGGGCAA AAAAACCCACGATAA smpB 1388915 - 1389394 + | SsrA-binding protein msrA/msrB 1389387 - 1390241 + | peptide methionine sulfoxide reductase CBUD_1395 1390658 - 1390242 - | hypothetical membrane associated protein TERM 1600 1391319 - 1391343 + G 75 -8.6 -3.77464 | CGTATCAAGACGGTT GTGACGACGA ATTTA TTGTCGTCGC TTTGCTGCATGATAT CBUD_1396 1391021 - 1391686 + | phosphohydrolase family protein hetM 1393076 - 1392528 - | polyketide synthase CBUD_1399 1393433 - 1393329 - | hypothetical protein CBUD_1400 1396108 - 1393460 - | hypothetical cytosolic protein TERM 1601 1395280 - 1395295 + g 70 -5.4 -4.4773 | ATATTTTCACAGGGG CCGGAA TATT TTCTGG TTTTAGTTGATCTGA TERM 1602 1396305 - 1396317 + r 70 -3.4 -4.90778 | opp_overlap 1396305 CGAAAGTTTCAAGAA TAGC TAATT GCTA TTTTGTTTGAGTGCA CBUD_1401 1396433 - 1396308 - | hypothetical protein CBUD_1402 1397286 - 1396642 - | hypothetical cytosolic protein CBUD_1404 1398206 - 1397979 - | hypothetical cytosolic protein CBUD_1404a 1398227 - 1398337 + | hypothetical protein CBUD_1405 1398489 - 1398361 - | hypothetical protein TERM 1603 1398424 - 1398400 - G 71 -2.2 -5.09426 | gap 1, opp_overlap 1398404, overlap 1398404 TTCAATTTTAAAAAA GCAAGCTTTGA AATT TGAAAGCT-GC TTGAAGTAAAAAGTT TERM 1604 1398546 - 1398557 + r 89 -5.8 -5.45726 | opp_overlap 1398545 TCCTACCGATTTAAG GTGC ATCG GCAC TTTTTTTAAAATCTA TERM 1605 1398588 - 1398576 - R 70 -5.5 -4.4267 | TTTTAAAATCTAAAA GCGAA TAG CTCGC GGAAATAAATTGAAT TERM 1606 1398703 - 1398691 - R 76 -9.1 -3.65199 | overlap 1398695 AACGGCTTATTTAAA CGCAC TGC GTGCG TCACATGGATATTTT CBUD_1406 1399473 - 1399054 - | hypothetical cytosolic protein CBUD_1408 1400045 - 1399665 - | transcriptional regulator, MerR family ihfA 1400325 - 1400014 - | integration host factor alpha-subunit pheT 1402708 - 1400330 - | phenylalanyl-tRNA synthetase beta chain pheS 1403694 - 1402708 - | phenylalanyl-tRNA synthetase alpha chain TERM 1607 1402759 - 1402747 - G 78 -5.5 -5.03715 | ATCATTTTCAAAAAA CAACC GCA GGTCG GTGACTTCATAACGC TERM 1608 1403007 - 1402994 - G 80 -3.9 -5.40072 | opp_overlap 1402994 TCTTTTTCAAAAAAA CAATT TAAA AATTG TTGTAATAACCCTTT TERM 1609 1403497 - 1403517 + g 74 -6.9 -4.30576 | opp_overlap 1403514 TAATTGCTGGATTTC GCGCTTAAT CTC ATTAACCGC TTTTCCTAATAACGG rplT 1404130 - 1403771 - | LSU ribosomal protein L20P TERM 1610 1404536 - 1404570 + H 90 -10.8 -4.15453 | opp_overlap 1404533 GGATCCAGATTAGGG GGCTAAGAAAAACATC GAT GGCGCTTTTCTTAGCC TTTTAGCCTGGATTC CBUD_1412a 1404588 - 1404689 + | hypothetical cytosolic protein rpmI 1404964 - 1404770 - | LSU ribosomal protein L35P infC 1405454 - 1404945 - | bacterial protein translation initiation factor 3 (IF-3) TERM 1611 1405086 - 1405072 - G 70 -7.8 -3.57883 | ACAATATTCCCTAAA TCGCGC TTC ACGCGA CCTAATAACTCTAAA thrS 1407519 - 1405537 - | threonyl-tRNA synthetase TERM 1612 1407366 - 1407354 - G 71 -3.4 -4.96427 | CAATAATAAAAGAAA CATC GACAA GATG ATCATCGATTTTGCC CBUD_1416 1407589 - 1407906 + | hypothetical cytosolic protein TERM 1613 1408480 - 1408494 + T 85 -8.6 -4.32034 | AATATCTATTATCAC GTTCGA TCA TCGAAC TTTTGGTAATAATCA CBUD_1418 1410318 - 1409008 - | polyamine oxidase TERM 1614 1410410 - 1410422 + H 74 -9.1 -3.47392 | opp_overlap 1410407 1410408, overlap 1410408 AATCCACCCAAACCG CCGCT GAG AGCGG TAATTTTTTGATTTA CBUD_1420 1410500 - 1410934 + | CBS domain containing protein TERM 1615 1410973 - 1410943 - f 73 -8.2 -3.90318 | opp_overlap 1410945, overlap 1410945 TCATTAGTCGATAAA GACACCCCGTCGAT ATG AGCCACGGGGTGTT TTCCTAAATTTCATT TERM 1616 1410971 - 1410945 - f 82 -10.8 -3.54 | opp_overlap 1410945, overlap 1410943 ATTAGTCGATAAAGA CACCCCGTCGAT ATG AGCCACGGGGTG TTTTCCTAAATTTCA TERM 1617 1410945 - 1410971 + F 91 -10.8 -4.33165 | opp_overlap 1410945 1410943 ATTAGTCGATAAAGA CACCCCGTCGAT ATG AGCCACGGGGTG TTTTCCTAAATTTCA CBUD_1422 1411088 - 1411879 + | hypothetical membrane spanning protein CBUD_1421 1412967 - 1411834 - | hypothetical membrane spanning protein CBUD_1425 1413468 - 1414616 + | cyclin protein CBUD_1424 1415528 - 1414611 - | transporter, drug/metabolite exporter family TERM 1618 1415512 - 1415498 - G 100 -4.9 -6.11243 | opp_overlap 1415498 ATGTAATAAAAAAAA GGGCA AGATG CGCCC TTACTGAAAGTTTCA dnaE 1419068 - 1415637 - | DNA polymerase III alpha subunit TERM 1619 1416526 - 1416511 - G 80 -4.8 -5.2291 | ACACGAGAACAAAAA TTAAAG AGTC CTTTAA ATTCACCTTCAGCTT TERM 1620 1417635 - 1417667 + g 78 -5.6 -4.85599 | gap 1 TTCATCTTCCGCGTA GCGCTT-AGCCAGTA TTTC TTCTTGCTCAAGCGC TTTTTCTAACGTCAC CBUD_1427 1420191 - 1419070 - | D-alanine--D-alanine ligase TERM 1621 1419902 - 1419916 + g 71 -8.5 -3.55444 | opp_overlap 1419902 CAATCTGCCGAATAA CGGCG TCCAT CGCCG TTTAACGACTGCCAA TERM 1622 1419916 - 1419902 - G 73 -8.5 -3.62522 | opp_overlap 1419902 CAATCTGCCGAATAA CGGCG TCCAT CGCCG TTTAACGACTGCCAA rnhB 1420946 - 1420338 - | ribonuclease HII CBUD_1429 1421254 - 1420958 - | hypothetical protein guaA 1422815 - 1421241 - | GMP synthase [glutamine-hydrolyzing] TERM 1623 1422431 - 1422412 - G 76 -7.8 -4.19371 | opp_overlap 1422412 CAAACGTCTAACAAA GGTTCGCC TTGA GGCGAAAC TTGATCTTCAATACC TERM 1624 1422477 - 1422460 - G 100 -6.3 -5.63517 | gap 1 CCGTCAAATAAAAAA GCGGG-AT TTA ATACCCGC AATTGCGCATGTCCA guaB 1424321 - 1422852 - | inosine-5'-monophosphate dehydrogenase TERM 1625 1423867 - 1423883 + g 70 -3.7 -4.76041 | AGGCGATCTTTGGGC GTCATTA AAT TAACGAC TTTTTGCTGCATGTC CBUD_1432 1425899 - 1424415 - | hypothetical membrane spanning protein TERM 1626 1425501 - 1425488 - G 95 -2.5 -6.34616 | opp_overlap 1425488 CTAAAACAAAAAAAA TAAAA TAAC TTTTA TTGTTAGAAGGACGC CBUD_1433 1426022 - 1427284 + | transporter, MFS superfamily TERM 1627 1428609 - 1428574 - gT 100 -11.9 -3.83998 | gap 1, opp_overlap 1428595, overlap 1428594 CTACTTTAGATGAAA GCGCCCAA-CAATGGG ATAAA CCCAATGGCTGGGCGC CGCTGCATTGGATTG CBUD_1434 1430252 - 1428828 - | glutamate/gamma-aminobutyrate antiporter treA 1427535 - 1428917 + | trehalase TERM 1628 1429448 - 1429438 - Gf 93 -6.8 -5.43866 | overlap 1429446 TAAGCGCTAAAAAAA GCGT CAA ACGC CTGCATAATGCCAGC TERM 1629 1430576 - 1430590 + G 79 -3.4 -5.26247 | AACAGCACCCACCCA CTTCGG GGG CCGTGG TTTTATTTGTTTTCG CBUD_1435a 1430465 - 1430632 + | hypothetical protein TERM 1630 1430902 - 1430881 - g 83 -8.8 -4.15788 | opp_overlap 1430872 1430870 AACCGCCTGAAGAAA CTTTGGCT GTTTTA AGCCAAAG CGTAAGCGAGGGTGC TERM 1631 1431196 - 1431180 - g 88 -10.9 -3.75153 | opp_overlap 1431195 1431195, overlap 1431195 TCTTCTGAACTTAAA GCTTCCT GGG AGGAAGC CGAACGGTATACTAC CBUD_1437 1430709 - 1432448 + | hypothetical cytosolic protein TERM 1632 1432568 - 1432594 + T 72 -9.4 -2.9665 | opp_overlap 1432567 1432566, overlap 1432567 GTTTTCCGTTAAAGC GTTGACTGCTGC ACG GCAGCGGCTAAC ATTTCTGCGGTTTGG glmM 1433901 - 1432561 - | phosphoglucosamine mutase TERM 1633 1432685 - 1432696 + g 75 -7.2 -4.25754 | opp_overlap 1432683 1432681 1432685 GGGCGCAATAAGATA CGGC CGGC GCCG TTTAATTGTTTTTCG TERM 1634 1432712 - 1432725 + g 79 -3.1 -5.27779 | gap 1 TTTAATTGTTTTTCG GCC-TC GGT GATGGC TTTTTTAATGTTGGG TERM 1635 1432775 - 1432761 - G 75 -7.1 -4.28254 | opp_overlap 1432746 1432760 GGGCAATATCTAAAA TGCCC TTTAT GGGCA CATTTATTAATACTT TERM 1636 1433921 - 1433954 + r 100 -21.1 -3.84719 | CCTCTTCAATTTTAG GCTCGTCATTCCCGC CTGC GCGGGGATGACGGGC TTTAAGTTTCCCGCT folP 1434883 - 1433990 - | dihydropteroate synthase TERM 1637 1434878 - 1434908 + g 100 -14.7 -3.09492 | AAATGCCTCCTTACT CATCATCCCGCGG AAAAA CCGCGGGATGGGG TGTTAACGTTAAAGA ftsH 1436878 - 1434926 - | cell division protein TERM 1638 1434995 - 1435016 + g 73 -3.7 -4.99645 | TTCTTCGCCTTTCTC TTCCGATAG TTCT TTTTCGGAA TTTTCTTTGTGAGCT TERM 1639 1435843 - 1435855 + g 79 -7.7 -4.29106 | AGGCTTTAACGTCTT TTGCC AGA GGCAA TTTATTCATGTGCAC TERM 1640 1436129 - 1436141 + g 86 -7.7 -4.63527 | opp_overlap 1436129 1436128 1436125 ATCGATAAAAATAAT GCAAG GCG CTTGC TTTTTAGCCTGATCG TERM 1641 1436218 - 1436208 - G 74 -6.8 -4.39828 | AACATCTCCACAAAA TCCG AAC CGGA AATGGTGAAGAAAGG TERM 1642 1436249 - 1436221 - G 70 -7.6 -3.66921 | gap 1, opp_overlap 1436235 1436236, overlap 1436236 AATCCGAACCGGAAA TGGTGAAG-AAAG GAAC CTTCGCTTCACCA GCGACGGCTTTAGCC rrmJ 1437536 - 1436898 - | 23S rRNA Um2552 2'-O-methyltransferase TERM 1643 1437456 - 1437471 + g 71 -3.2 -5.07107 | overlap 1437457 CTTGTACGCTGCGCG CGAAGG ATAG CCTTCC TTTTTTGCCCGTTTG CBUD_1442 1438100 - 1437558 - | hypothetical cytosolic protein sufA 1438455 - 1438102 - | HesB protein family TERM 1644 1438143 - 1438159 + g 84 -10.9 -3.65224 | opp_overlap 1438143 1438142 CCCCACAACCACAAG CCCCAAT TGC ATTGGGG TTATTAAAGTGAAGT TERM 1645 1438159 - 1438143 - G 76 -10.9 -2.73474 | opp_overlap 1438143, overlap 1438142 CCCCACAACCACAAG CCCCAAT TGC ATTGGGG TTATTAAAGTGAAGT iscU 1438928 - 1438452 - | IscU sufS 1440138 - 1438921 - | cysteine desulfurase TERM 1646 1439548 - 1439563 + g 72 -6.2 -4.25283 | CTGCGCACCATCCAG CAAAAC AGGG GTTTTG TTTTGATGAGCCAAT sufD 1441411 - 1440131 - | SufD TERM 1647 1440793 - 1440781 - G 74 -7.7 -3.97368 | GCTGCAATTTATAAA GCTCA AGA TGAGC AGCCGAATTAACCTT sufC 1442142 - 1441408 - | ATP-dependent transporter sufB 1443620 - 1442166 - | ABC transporter-associated protein sufR 1444062 - 1443601 - | Rrf2 family protein TERM 1648 1445251 - 1445261 + G 74 -6.8 -4.29845 | GGGTTTCACCGACAT CCGT CGC ACGG TTTTGCATTACCTTA czcD.1 1444271 - 1445407 + | cobalt-zinc-cadmium resistance protein TERM 1649 1445685 - 1445697 + G 70 -7.7 -3.67622 | overlap 1445667 GGCACAATTAGTGTG GGGTA TAA TACCC TTGGTTTTGACGATG CBUD_1451 1445400 - 1446776 + | exodeoxyribonuclease I TERM 1650 1446762 - 1446776 + F 81 -5.8 -5.04385 | overlap 1446770 GAATTAGATCATTAT TTAAGA CTG TCTTAA TTTTTTAAGGCTATA TERM 1651 1446901 - 1446921 + G 73 -5.4 -4.68424 | CGAGCAAGGCCCTCA GGCGTTTG CCAAC CAAGTGCC TTTTTACGTGACTTG CBUD_1452 1446800 - 1448353 + | hypothetical membrane associated protein CBUD_1453 1448719 - 1448387 - | hypothetical protein TERM 1652 1448792 - 1448774 - H 72 -10.2 -2.58812 | overlap 1448770 CGCAAACGGAATCCA GGCGCACC TTC GGTGCGCT ACGCACGCTAGGTCC TERM 1653 1451107 - 1451117 + G 82 -6.8 -4.8048 | opp_overlap 1451106 GCCTATTTTGAAATT CACC CGT GGTG TTTTTGGTCTGAAAC CBUD_1455 1450786 - 1451805 + | hypothetical membrane associated protein TERM 1654 1451880 - 1451829 - T 100 -28.3 -3.14931 | opp_overlap 1451829 1451840, overlap 1451840 GGTAGCCCGTATGAA GCGCAGCGAAATACGGGAACAAC GATGAT GCGGTTCCCGTATTTCGCTGCGC TTCATACGGGCTACT TERM 1655 1451829 - 1451880 + T 100 -26.8 -3.1505 | opp_overlap 1451829 1451840, overlap 1451840 GGTAGCCCGTATGAA GCGCAGCGAAATACGGGAACAACG ATGA TGCGGTTCCCGTATTTCGCTGCGC TTCATACGGGCTACT TERM 1656 1451869 - 1451840 - T 73 -8.6 -3.66874 | opp_overlap 1451829 1451840, overlap 1451829 TGAAGCGCAGCGAAA TACGGGAACAAC GATGAT GCGGTTCCCGTA TTTCGCTGCGCTTCA CBUD_1457 1452991 - 1452005 - | hypothetical membrane associated protein TERM 1657 1452847 - 1452859 + g 70 -5.5 -4.49041 | CCGGGTGTAAAATTT CTGCT GAA GGCAG TTCTTTTAATTTTTT TERM 1658 1453038 - 1453026 - R 74 -4.9 -4.77757 | opp_overlap 1453026 TTTGAAAAATTAAAA TTGAA TTA TTCAA TTTAGTATATAATTC yeaZ 1453864 - 1453184 - | non-proteolytic protein, peptidase family M22 TERM 1659 1453831 - 1453815 - G 90 -10.8 -3.92869 | overlap 1453826 CCATTTAGCCACAAA GCGGCC GAACA GGCCGC GGTAGCCGTTTCAAG TERM 1660 1453930 - 1453976 + r 95 -14.1 -3.09516 | opp_overlap 1453930, overlap 1453936 GCCCGTATGAGCGAA GCGAAATACGGG-GACGATAGAT GAC ATC-ATTGTTTCCCGTATTTCGC TTCGCTCATACGGGC TERM 1661 1453976 - 1453930 - R 72 -9.7 -3.09516 | opp_overlap 1453930 1453936 GCCCGTATGAGCGAA GCGAAATACGGG-GACGATAGAT GAC ATC-ATTGTTTCCCGTATTTCGC TTCGCTCATACGGGC CBUD_1459 1454550 - 1454008 - | hypothetical membrane associated protein pabB 1454689 - 1455981 + | para-aminobenzoate synthetase component I TERM 1662 1456015 - 1456033 + G 78 -9 -3.82946 | opp_overlap 1456014 AATTTTTGCATGAAG TTTTTGAC TTA GTCAAAAA TTCTATTTCGCATAA TERM 1663 1456316 - 1456302 - g 76 -2.8 -5.26875 | opp_overlap 1456304, overlap 1456304 TCTTTAACTAAAAAA GACGCT GAG AACATC GGTTTCAAGGACGCT CBUD_1461 1455978 - 1456457 + | hypothetical protein CBUD_1462 1458634 - 1456490 - | GTP pyrophosphokinase TERM 1664 1458893 - 1458872 - g 70 -5.7 -4.36595 | opp_overlap 1458872 GATGGAAAGGTAAAA GCGGGACCG AGTA CGTTCTCGC TATGTTACCACTCGG CBUD_1462a 1458712 - 1459293 + | membrane endopeptidase, M50 family CBUD_1462b 1459496 - 1459365 - | hypothetical protein CBUD_1462c 1459585 - 1460076 + | membrane endopeptidase, M50 family TERM 1665 1460150 - 1460135 - f 79 -3.2 -5.41143 | overlap 1460137 TATTTCCTAAAAAAA GTGGAA ATTT TTCCCC CTCGTTTAATTAAAA CBUD_1462d 1460207 - 1460341 + | hypothetical protein TERM 1666 1460553 - 1460592 + T 86 -10.9 -3.90112 | gap 2, opp_overlap 1460578 1460579, overlap 1460554 1460556 TATTGATTATTTCCC CCAGCCTAGTCTGTCCGTT GTAA AACGG-CAG-CTAGGCTGC TTTCATTCCAGGAAG TERM 1667 1460554 - 1460591 + T 95 -14.4 -2.93853 | gap 2, opp_overlap 1460578 1460579, overlap 1460553 1460556 ATTGATTATTTCCCC CAGCCTAGTCTGTCCGTT GTAA AACGG-CAG-CTAGGCTG CTTTCATTCCAGGAA TERM 1668 1460556 - 1460589 + T 81 -11.2 -3.02166 | gap 2, opp_overlap 1460578 1460579, overlap 1460554 1460553 TGATTATTTCCCCCA GCCTAGTCTGTCCGTT GTAA AACGG-CAG-CTAGGC TGCTTTCATTCCAGG TERM 1669 1460873 - 1460856 - T 71 -4.9 -4.55826 | overlap 1460858 TTGAAAATATTAAAA TAGGATT GCCT AATCCCA TGCGAACCGTTGAAG TERM 1670 1462657 - 1462608 - T 100 -20.3 -3.14931 | gap 1, opp_overlap 1462608 1462613, overlap 1462613 1462619 GGTAGCCCGTATGAA GCGAAGCGAAATACGGGGAAATCT TAT AGTTCTCC-CGTATTCCGCTTCGC TTCATACGGGCTACT TERM 1671 1462608 - 1462657 + T 100 -18.1 -3.1505 | gap 1, opp_overlap 1462608 1462613 1462619, overlap 1462613 GGTAGCCCGTATGAA GCGAAGCGAAATACGGGGAAATCT TAT AG-TTCTCCCGTATTCCGCTTCGC TTCATACGGGCTACT TERM 1672 1462613 - 1462652 + T 73 -9.4 -3.20723 | gap 1, opp_overlap 1462608 1462613 1462619, overlap 1462608 CCCGTATGAAGCGAA GCGAAATACGGGGAAATCT TAT AG-TTCTCCCGTATTCCGC TTCGCTTCATACGGG TERM 1673 1462652 - 1462613 - T 82 -11.6 -3.20723 | gap 1, opp_overlap 1462613 1462608, overlap 1462608 1462619 CCCGTATGAAGCGAA GCGAAATACGGGGAAATCT TAT AGTTCTCC-CGTATTCCGC TTCGCTTCATACGGG cysQ1 1463492 - 1462677 - | 3'(2'),5'-bisphosphate nucleotidase nudE 1464045 - 1463482 - | ADP-ribose pyrophosphatase TERM 1674 1463531 - 1463519 - G 78 -5.5 -4.91852 | opp_overlap 1463528 TCCACTAAAAATAAA GCAGC CAC ACTGC GCGCTTCGTGAAATT CBUD_1468 1464098 - 1465225 + | oxygen-independent coproporphyrinogen-III oxidase CBUD_1468a 1465600 - 1465343 - | hypothetical protein TERM 1675 1465677 - 1465646 - H 73 -5.6 -4.62471 | overlap 1465647 CTTAATTTCTAAAAA CCCGTCGTCCCCGC GAAG GCGGGGACCCAGCG CACTACGTGCGCAGC TERM 1676 1465675 - 1465647 - H 70 -8.8 -3.37 | gap 1, overlap 1465646 TTAATTTCTAAAAAC CCGTCGTCCCCGC GAAG GCGGGGACC-CAG CGCACTACGTGCGCA TERM 1677 1465840 - 1465809 - H 73 -5.6 -4.62471 | overlap 1465810 CTTAATTTCTAAAAA CCCGTCGTCCCCGC GAAG GCGGGGACCCAGCG CACTACGTGCGCAGC TERM 1678 1465838 - 1465810 - H 70 -8.8 -3.37 | gap 1, overlap 1465809 TTAATTTCTAAAAAC CCGTCGTCCCCGC GAAG GCGGGGACC-CAG CGCACTACGTGCGCA TERM 1679 1466003 - 1465972 - H 73 -5.6 -4.62471 | overlap 1465973 CTTAATTTCTAAAAA CCCGTCGTCCCCGC GAAG GCGGGGACCCAGCG CACTACGTGCGCAGC TERM 1680 1466001 - 1465973 - H 70 -8.8 -3.37 | gap 1, overlap 1465972 TTAATTTCTAAAAAC CCGTCGTCCCCGC GAAG GCGGGGACC-CAG CGCACTACGTGCGCA TERM 1681 1466011 - 1466040 + H 83 -10.7 -3.64703 | gap 1, overlap 1466015 ACCCAGCGCACTACG TGCGCA-GCGCGCC AAA GGCGCGCCTGTGGA TTTCGATACGCAAAA TERM 1682 1466015 - 1466036 + H 83 -12.3 -2.66272 | gap 1, overlap 1466011 AGCGCACTACGTGCG CA-GCGCGCC AAA GGCGCGCCTG TGGATTTCGATACGC CBUD_1470 1466150 - 1466914 + | metal-dependent hydrolase CBUD_1472 1466917 - 1468062 + | CAAX amino terminal protease family CBUD_1471 1468347 - 1468036 - | hypothetical membrane spanning protein CBUD_1473 1469179 - 1468355 - | hypothetical cytosolic protein TERM 1683 1468597 - 1468609 + g 71 -6.9 -4.18506 | opp_overlap 1468597 CGATAACGGCAGAAA GCGGG GAT TCCGC TTCTTTTAACACTGC CBUD_1474 1469359 - 1469186 - | hypothetical protein CBUD_1475 1469754 - 1469356 - | ferredoxin, 2Fe-2s TERM 1684 1469720 - 1469730 + g 73 -5.4 -4.72272 | TTTAATACATCAAGC TTGC ATT GCAA TTTTTCATCGGGCGG nadA 1470746 - 1469751 - | quinolinate synthetase A TERM 1685 1469800 - 1469785 - G 82 -7.6 -4.48987 | CGGTTATAACTAAAA TCCAAC ATCC GTTGGA GCGGCACTTTAGCCT TERM 1686 1470221 - 1470235 + g 75 -2 -5.28176 | opp_overlap 1470223 CTTTCCATAAAATCA TATCGG CTC CCGTTG TTTTTTGTAAATAAC TERM 1687 1470538 - 1470563 + g 100 -15.5 -3.14132 | opp_overlap 1470531 1470532 1470552 CCCATAAATCGGACT CCGGCAACCAT CAAG GTGGTTGCCGG TTGCTCCACCCCAAA TERM 1688 1471071 - 1471098 + r 82 -10.6 -3.60762 | gap 1, overlap 1471072 CATAGCTGTCTTGGT CGCGCACATCGGC AAT GACGATGT-CGCG CTTTTTTACCAACTC TERM 1689 1471072 - 1471099 + r 93 -10.6 -5.02074 | gap 1, overlap 1471071 ATAGCTGTCTTGGTC GCGC-ACATCGGC AAT GACGATGTCGCGC TTTTTTACCAACTCC CBUD_1478 1474709 - 1471194 - | pyridine nucleotide-disulfide oxidoreductase family TERM 1690 1474379 - 1474369 - G 71 -8.2 -3.53012 | CCTGCCTTTTTTAAA GCCC GCC GGGC TTCGCGAAGAACATA CBUD_1479 1474761 - 1474964 + | hypothetical protein TERM 1691 1474991 - 1474965 - T 100 -13.8 -3.95324 | opp_overlap 1474964 1474967 1474970 GATTTTGAAGAATAA CATCACCCTCGC TTT ACGAAGGTGATG GGTTATAATCCTTGA CBUD_1479a 1475324 - 1475007 - | hypothetical protein CBUD_1480 1475820 - 1475521 - | glutaredoxin bolA.1 1476062 - 1475823 - | BolA TERM 1692 1476403 - 1476393 - g 71 -3.2 -5.03715 | ATCACTGCCAAAAAA GAAG CCC CTCC TGATGCGGACGACTG CBUD_1483 1476135 - 1476470 + | ferredoxin CBUD_1482 1477261 - 1476440 - | hypothetical protein TERM 1693 1476641 - 1476663 + g 74 -4.8 -4.87133 | opp_overlap 1476641 1476661 CCAATTTATAAAACG TCGAAAATGC TCG GCATAATCGA TTTTATTTGAAAAAT TERM 1694 1477332 - 1477289 - H 82 -11.2 -3.14931 | opp_overlap 1477289, overlap 1477309 1477321 TGTAGCCCGTATGAA GCGAAATACGGGAGATTA AATTTTAA TAAAATCCCGTATTTCGC TTCGCTTCATACGGG TERM 1695 1477289 - 1477332 + H 82 -11.2 -3.20723 | opp_overlap 1477289 1477309 1477321 TGTAGCCCGTATGAA GCGAAATACGGGAGATTA AATTTTAA TAAAATCCCGTATTTCGC TTCGCTTCATACGGG TERM 1696 1477861 - 1477851 - g 76 -6.8 -4.43844 | CGAGCACTGACAAAA GACC AAT GGTC AGCGTGGGTATGGAC TERM 1697 1478268 - 1478278 + G 71 -2.4 -5.08255 | opp_overlap 1478268 TTTTTGTGGATAGTA GGCC TAG GCCC TTTTGTTTTAACACT TERM 1698 1478335 - 1478345 + G 91 -4.6 -5.64006 | ATTTAGTCAGCCGAT GGGG TTA TCCC TTTTTTTCATTAAGT CBUD_1484 1477386 - 1478879 + | undecaprenyl-phosphomannose:protein mannosyltransferase CBUD_1485 1478866 - 1479840 + | polyprenyl-phosphate beta-D-glucosyltransferase CBUD_1486 1480629 - 1479853 - | hypothetical membrane spanning protein CBUD_1487 1482668 - 1480617 - | 3-hydroxyacyl-CoA dehydrogenase TERM 1699 1481595 - 1481620 + g 82 -6 -5.07053 | opp_overlap 1481591 1481596, overlap 1481596 1481613 1481615 TTTTTCATAAAGAGC ATGCGCCCGC TTTATC GCCGGCGCAA TTTTTTCCGCTGATT TERM 1700 1481596 - 1481619 + g 78 -9.5 -3.63148 | opp_overlap 1481591 1481596, overlap 1481595 1481613 1481615 TTTTCATAAAGAGCA TGCGCCCGC TTTATC GCCGGCGCA ATTTTTTCCGCTGAT TERM 1701 1481619 - 1481596 - G 70 -9.5 -2.89797 | opp_overlap 1481596 1481595 1481613 1481615, overlap 1481591 TTTTCATAAAGAGCA TGCGCCCGC TTTATC GCCGGCGCA ATTTTTTCCGCTGAT TERM 1702 1481663 - 1481651 - G 74 -10.5 -2.64472 | overlap 1481647 TATCGTGTAAAGTCA CGCGG ATG CCGCG AAGCGCACACCAAGC TERM 1703 1481802 - 1481781 - G 100 -10.2 -5.75342 | opp_overlap 1481783 TTCTCTTAAAAAAAA CAGTCGCA CCATGT TGCGACTG CTCTCGGTCATCATT TERM 1704 1482669 - 1482714 + r 91 -7.8 -5.32699 | overlap 1482670 1482675 1482677 TCGCTGCCATTTCAA TTTTAAGCTTCGTCATT-CCGC GCAG GCGGGGATGACG-AGCTTTAAG TTTTTTAGTCTTTAC TERM 1705 1482670 - 1482713 + r 76 -9.1 -3.77993 | overlap 1482669 1482675 1482677 CGCTGCCATTTCAAT TTTAAGCTTCGTCATT-CCGC GCAG GCGGGGATGACG-AGCTTTAA GTTTTTTAGTCTTTA TERM 1706 1482675 - 1482708 + r 83 -9 -4.06778 | overlap 1482670 1482669 1482677 CCATTTCAATTTTAA GCTTCGTCATT-CCGC GCAG GCGGGGATGACG-AGC TTTAAGTTTTTTAGT CBUD_1488 1484014 - 1482719 - | 3-ketoacyl-CoA thiolase TERM 1707 1482779 - 1482805 + g 100 -16.6 -5.2696 | opp_overlap 1482752 1482784 TTGGCCACCGCCGAT GCAAAGCGCAGC GAT GCCGCGCTTTGC TTTTTTGCGTTTTAG TERM 1708 1482800 - 1482784 - G 90 -11.5 -3.6502 | opp_overlap 1482779, overlap 1482752 CACCGCCGATGCAAA GCGCAGC GAT GCCGCGC TTTGCTTTTTTGCGT TERM 1709 1483720 - 1483704 - G 70 -8 -3.68351 | TCCGCACGACCTAAA GCGATG TCTTT CATCGC TGAATCAATGGCCTG TERM 1710 1484348 - 1484382 + r 100 -15.3 -4.29845 | gap 1, opp_overlap 1484345 GTCGGGAGGACAGGG GGCTAAGAAAAGC-AC CGAT GTCGCTTTTCTTAGCC TTTTAGCTTAGATTC CBUD_1490 1486703 - 1484556 - | acyl-CoA dehydrogenase, long-chain specific TERM 1711 1484747 - 1484733 - G 78 -10 -3.55444 | opp_overlap 1484744 TTGCCATTCTTGAAA CGCCTT TTC AAGGCG TCCGACGGCTTCTTT CBUD_1491 1488089 - 1486713 - | cytosol aminopeptidase TERM 1712 1486909 - 1486927 + g 100 -8.9 -4.7078 | TTTTGTGAACTGTTG GTGAGGT CAGCT ACCTCAC TTTTTAAATAATTCC TERM 1713 1488337 - 1488351 + H 70 -2.8 -5.03747 | opp_overlap 1488339, overlap 1488339 TCTCTTTCTCAAATT GATCAA AAT TTGAAC TTTTTTGAAAAATTT CBUD_1492 1488411 - 1488836 + | hypothetical protein CBUD_1493 1489051 - 1490733 + | amino acid permease TERM 1714 1490867 - 1490877 + G 82 -3.2 -5.53991 | AACTGAAGACCCCGC CGTT GCT GACG TTTTTTTACTAAATA miaB 1490754 - 1492073 + | tRNA 2-methylthioadenosine synthase TERM 1715 1492851 - 1492870 + G 70 -7.9 -3.61398 | opp_overlap 1492867 1492868, overlap 1492844 GTTTTTGACCCGTAT CGGCTTT GGGTCG AAAGCCG TTATTACGGGAGACA CBUD_1495 1492084 - 1493055 + | PhoH-like protein CBUD_1496 1493052 - 1493510 + | hypothetical metal-binding protein TERM 1716 1493683 - 1493694 + G 73 -5.8 -4.48743 | opp_overlap 1493673, overlap 1493670 TTCAACGTTGGAGCG CCCA CGAT TGGG TTTATTTCGGCTTTT TERM 1717 1493877 - 1493889 + G 74 -6.9 -4.3295 | CCGCATCCTGATGGG GGTGG GAT CCGCC TTTGGTTTTATTGGC TERM 1718 1494741 - 1494759 + G 70 -5.9 -4.39277 | GCTTTTTGTTTTGCC GGCGTTG TTATT CATCGCC TTTCTTATGATGTTC CBUD_1497 1493500 - 1494831 + | transporter, MFS superfamily corC 1494874 - 1495725 + | magnesium and cobalt efflux protein TERM 1719 1496624 - 1496610 - g 77 -3.6 -5.1861 | TTTATCATGAAAAAA CAAACA AAG TGTTTA ATGGACTAATGGTTC TERM 1720 1497061 - 1497033 - g 74 -4.5 -4.8622 | overlap 1497041 GTCCCGAAGGAAAAA TCGTAAAATCCGC CCC GCAGAATCAACGA CTCCTATTAACCGGC lnt 1495718 - 1497175 + | apolipoprotein N-acyltransferase CBUD_1501 1497401 - 1497823 + | hypothetical protein TERM 1721 1498510 - 1498529 + G 75 -2.2 -5.35224 | TAACTGGTCGTTACA TGGATA TCAGTATT TATCCA TTTTCTTTTTATGAG CBUD_1502 1497918 - 1499333 + | hypothetical ATPase CBUD_1504 1499475 - 1500218 + | phytochelatin synthase CBUD_1505 1501457 - 1500225 - | hypothetical cytosolic protein TERM 1722 1501405 - 1501388 - G 75 -9.1 -3.63744 | opp_overlap 1501387 1501388, overlap 1501386 CTGCGGCTGAAAATA CCGGCAC TAAC ATGCCGG GTTTGTAAAACTGAT TERM 1723 1501496 - 1501516 + H 90 -9.7 -4.37067 | opp_overlap 1501495 1501494 1501496 CTTTAAGAATAAAGG GTTGCCTCC TAA GGAGTCAAC TTTTGATCATATTTA TERM 1724 1501516 - 1501496 - H 70 -9.7 -2.55309 | opp_overlap 1501496, overlap 1501495 1501494 CTTTAAGAATAAAGG GTTGCCTCC TAA GGAGTCAAC TTTTGATCATATTTA TERM 1725 1502432 - 1502420 - g 82 -3.4 -5.41746 | overlap 1502429 AACGCGCTAAAAAAA GCAA GAAAA TTGC AGCCTTTCTAAAAAA TERM 1726 1502453 - 1502429 - g 70 -2.9 -4.95211 | overlap 1502420 AAAAAAGCAAGAAAA TTGCAGCCTTT CTA AAAAAATGCAA ACAAACGCGTGTGGC leuS 1501597 - 1504059 + | leucyl-tRNA synthetase CBUD_1507 1504049 - 1504600 + | rare lipoprotein B precursor holA 1504603 - 1505622 + | DNA polymerase III, delta subunit nadD 1505603 - 1506271 + | nicotinate-nucleotide adenylyltransferase CBUD_1510 1506477 - 1506680 + | hypothetical protein CBUD_1511 1506886 - 1507236 + | iojap protein family TERM 1727 1507613 - 1507628 + G 76 -10.4 -2.96249 | overlap 1507608 1507615 GCGTTAACGTTGCCG CACGCG TTGG CGCGTG TCATTGTTGCTGAAC CBUD_1512 1507226 - 1507693 + | hypothetical protein TERM 1728 1508561 - 1508584 + G 75 -10.4 -2.83403 | gap 1, opp_overlap 1508558, overlap 1508560 1508564 CAGCACAGGACAGGT CTTGGCGTTGG TTA CCAA-GCCAAG CTTTGATCCCAACCC pbpA 1507713 - 1509560 + | cell elongation specific D,D-transpeptidase rodA 1509603 - 1510751 + | rod shape-determining protein TERM 1729 1511645 - 1511634 - g 73 -5.8 -4.47888 | GCAATTGAAAAATAA GGGA ATTA TCCC ATCAGCTCCAATACC mltB 1510831 - 1511835 + | membrane-bound lytic murein transglycosylase B TERM 1730 1512200 - 1512173 - g 93 -2.9 -5.93809 | gap 1 TTTCGACAAAAAAAA TTTGATAATGCT AAAAA AGC-CTATCAAA AAGCTATTGCTTTGA TERM 1731 1512252 - 1512232 - g 71 -8.3 -3.55563 | opp_overlap 1512231 ACCCCATTTTGCAAA CGCGCAT TTCAATT ATGCGCG ACTTTTAATCGAGCT TERM 1732 1512331 - 1512303 - g 70 -3.8 -4.8622 | overlap 1512307 TTGCCGAATTAAAAA GAACTGTTGCGA TGTCC TCGCACCATTCC GCTGCTTTTAGTCAA CBUD_1516 1511816 - 1513501 + | tetratricopeptide repeat family protein htpX 1514588 - 1513542 - | endopeptidase TERM 1733 1514112 - 1514096 - G 86 -8.7 -4.4017 | opp_overlap 1514108 CTAATTTGTACAAAA GGCCGTT CGT AACAGCC ACCATCGCTGATTTT CBUD_1518 1515245 - 1514598 - | LemA TERM 1734 1514764 - 1514777 + g 71 -4.5 -4.6951 | overlap 1514765 TCGTTGTAAGCTTGC TTGGC GTAC GCCAG TTTATTTTCCGTGCT CBUD_1519 1515585 - 1515304 - | hypothetical protein TERM 1735 1515380 - 1515392 + g 91 -6.3 -5.47399 | CTCGCGCAGTTCCAA TCGAT CGA ATCGA TTTTTTTCCAATTAC TERM 1736 1516310 - 1516326 + r 78 -3.7 -5.2894 | GGCTTGATGTTGATC GCTTAAA TCA TTGAAGC TTTTATTTTCTCTTT TERM 1737 1516365 - 1516378 + r 73 -2.3 -5.20735 | ATGAGCCCGGCTAAC TCAGC CAGA GCAGA TTTATTTTTTCTTAA TERM 1738 1516493 - 1516477 - R 77 -5.1 -4.85782 | overlap 1516478 GTTCCGAAAAATAAA GGGAAAC AAC GTTTCCG CTCAGTCGTAAATCT TERM 1739 1516492 - 1516478 - R 72 -8.6 -3.50746 | overlap 1516477 TTCCGAAAAATAAAG GGAAAC AAC GTTTCC GCTCAGTCGTAAATC TERM 1740 1517483 - 1517470 - R 87 -3.1 -5.71712 | gap 1 TTCCACAGAAAAAAA CTG-CG ACC CGTCAG CAATACCGATAGTTG TERM 1741 1517949 - 1517921 - R 78 -2.5 -5.47159 | opp_overlap 1517922, overlap 1517922 TTTAATAAATAAAAA TTCTTATCGAT ACCAACA ACCGATAAGAT ATTTTTCTTTTCTTT ligA 1520936 - 1518915 - | NAD-dependent DNA ligase zipA 1521629 - 1520937 - | cell division protein smc 1525193 - 1521684 - | chromosome partition protein smc TERM 1742 1522481 - 1522496 + g 80 -9 -3.91897 | overlap 1522453 1522451 CTTCTAATTGCGCTT GCGCTT CATT AAGCGC TTTCTGCGTCGAAAC TERM 1743 1522501 - 1522514 + g 77 -4.5 -5.07486 | overlap 1522502 TCATTAAGCGCTTTC TGCGT CGAA ACGCG TTTTTCTTCAAGGTG TERM 1744 1522893 - 1522917 + g 80 -3.6 -5.25803 | overlap 1522898 GGCTAATAAGCCTTG TGAATCGTCT AACGA AGACGCTTTA TTTTTTATAAGCGTT TERM 1745 1523241 - 1523229 - G 71 -4.7 -4.72272 | overlap 1523230 TTCCCGCAGTAAAAA TCCGC TTT GCGGT GCGTCTTGTAGTTTC TERM 1746 1523240 - 1523230 - G 71 -8.2 -3.43042 | overlap 1523229 TCCCGCAGTAAAAAT CCGC TTT GCGG TGCGTCTTGTAGTTT TERM 1747 1525306 - 1525333 + r 79 -10.7 -3.18849 | gap 1, overlap 1525304 TATCGATCACGACTT TCTCCTCTC-CC GCTTG GGAGAGAGGAGA TATTGCTGATATAAA TERM 1748 1525372 - 1525353 - R 85 -2.8 -5.71712 | GCTGATATAAAAAAA GCTAGC CTCTTATC GCCAGC TAACTTAACTCCACT tppB 1526958 - 1525372 - | di-/tripeptide transporter TERM 1749 1527307 - 1527273 - H 79 -8.6 -4.08692 | opp_overlap 1527285 GAATCCCGGCTAAAA GCCTAAGAAAAGCGCC ATC GGTGTTTTTCTTAGCC CCCTAATCCGGGTCC TERM 1750 1527285 - 1527295 + H 76 -4.6 -5.06414 | opp_overlap 1527273 AAAGCCTAAGAAAAG CGCC ATC GGTG TTTTTCTTAGCCCCC TERM 1751 1527573 - 1527548 - g 75 -8.3 -3.79251 | gap 1, opp_overlap 1527550 1527552 1527553, overlap 1527553 CAGGCGAGGACCAAA CGCAA-CGCGCT GAA AGCGCGCTTGTG ATTTCCGCTGCGCGG TERM 1752 1527550 - 1527571 + G 71 -9.5 -2.92613 | gap 1, opp_overlap 1527548 1527553, overlap 1527552 1527553 GGCGAGGACCAAACG CAA-CGCGCT GAA AGCGCGCTTG TGATTTCCGCTGCGC TERM 1753 1527552 - 1527568 + G 70 -7.9 -3.60865 | opp_overlap 1527548 1527553, overlap 1527550 1527553 CGAGGACCAAACGCA ACGCGCT GAA AGCGCGC TTGTGATTTCCGCTG TERM 1754 1527567 - 1527553 - g 86 -11.4 -3.31415 | opp_overlap 1527552 1527550 1527553, overlap 1527548 GAGGACCAAACGCAA CGCGCT GAA AGCGCG CTTGTGATTTCCGCT TERM 1755 1527553 - 1527567 + G 81 -11.4 -2.76037 | opp_overlap 1527553 1527548, overlap 1527552 1527550 GAGGACCAAACGCAA CGCGCT GAA AGCGCG CTTGTGATTTCCGCT CBUD_1526 1527508 - 1527630 + | hypothetical protein CBUD_1527 1528635 - 1527664 - | hypothetical protein CBUD_1528 1528813 - 1530009 + | hypothetical membrane associated protein CBUD_1529 1531199 - 1530132 - | undecaprenyl-phosphate alpha-N-acetylglucosaminephosphotransferase TERM 1756 1530919 - 1530882 - G 74 -9.3 -3.26473 | opp_overlap 1530886, overlap 1530886 CCAAATGATCATCAA CAAAGCTGCAAATAATT GGCC AAATAATCGCAGCTTTG AACTTAGATCACTAA TERM 1757 1531329 - 1531308 - R 100 -14.5 -4.7923 | ATTCAAAGAAAGAAA TCTCTGGCG CTGG CGCCAGAGA CAAGCGCGATGGGGT TERM 1758 1531376 - 1531399 + r 90 -12.4 -3.51825 | opp_overlap 1531353 ATAGATTTTCTTCTC CCCTCTCCCG CTTG CGAGAGAGGG TTATCCTTCACCTAC CBUD_1531 1531782 - 1531411 - | COME operon protein 1 TERM 1759 1531641 - 1531656 + g 95 -7.6 -4.91852 | TTTGCGTACTCACGG CTGCAT GCCT ATGCAG TTTATTTTTAATCAC TERM 1760 1531732 - 1531742 + g 80 -2.6 -5.52384 | opp_overlap 1531732 TAATACCGCTGAAAT TAAT TGA ATTA TTTTTTTCATAAAAA pyrF 1532555 - 1531845 - | orotidine 5'-phosphate decarboxylase CBUD_1533 1533728 - 1532559 - | tetratricopeptide repeat family protein TERM 1761 1532674 - 1532687 + g 73 -2.5 -5.16237 | CAACGATAGATGGGT TTATT TTCC AATAA TTTTTTCATGAAATT TERM 1762 1533231 - 1533246 + g 71 -6.8 -4.16146 | overlap 1533242 CGCGAGTAATTTTTG GGCCGT TTCA ATGGCC TTTTGCCAGTCTTTT TERM 1763 1533721 - 1533708 - G 75 -3.1 -5.0925 | TGGCAAAAGCAAAAA TAACG CTTG CGCTA TCATCAATGAACGTC CBUD_1534 1534015 - 1533725 - | hypothetical membrane associated protein TERM 1764 1534162 - 1534146 - R 100 -12.3 -5.45726 | opp_overlap 1534146 GAGAGGGCAAAAAAA TACCCGC CTA GCGGGTA TTTTTTACTATTCGT TERM 1765 1534146 - 1534162 + r 100 -12.3 -5.28683 | opp_overlap 1534146 GAGAGGGCAAAAAAA TACCCGC CTA GCGGGTA TTTTTTACTATTCGT rpsA 1535837 - 1534170 - | SSU ribosomal protein S1P TERM 1766 1535563 - 1535573 + g 87 -8.2 -4.56597 | overlap 1535549 TCGCTCCACGCTTTA GCGC GTC GCGC TTTTTCGCGCGAGAG TERM 1767 1535872 - 1535930 + r 100 -15.7 -3.22995 | gap 1, overlap 1535873 1535874 1535922 AATAAAGATACGGGT TAGGGTCTGTTTACGATTCTACTAGTCT GTCC AGACTAGC-GAATTGTAAACAGACTCCA GTTTGTTGTACTTCC TERM 1768 1535873 - 1535931 + r 74 -6.4 -4.40132 | gap 3, overlap 1535872 1535874 1535922 ATAAAGATACGGGTT -AGG-GTCTGTTTACGATTCTACTAGTCT GTCC AGACTAGC-GAATTGTAAACAGACTCCAG TTTGTTGTACTTCCT TERM 1769 1535874 - 1535929 + r 100 -15.9 -2.53074 | overlap 1535872 1535873 1535922 TAAAGATACGGGTTA GG-GTCTGTTTACGATTCTACTAGTCT GTCC AGACTAGC-GAATTGTAAACAGACTCC AGTTTGTTGTACTTC cmk 1536682 - 1535969 - | cytidylate kinase aroA 1537999 - 1536683 - | 3-phosphoshikimate 1-carboxyvinyltransferase serC 1539087 - 1538005 - | phosphoserine aminotransferase gyrA 1541700 - 1539148 - | DNA gyrase subunit A TERM 1770 1540490 - 1540501 + g 85 -7.2 -4.7497 | TCTTTAGCAATGGCT GGCG TTTT CGCC TTTTTAATGAGTGCA TERM 1771 1541556 - 1541569 + g 76 -9.5 -3.55444 | opp_overlap 1541550 1541555 TGGCATATAGCACAC GCCGG TGCA CCGGC TTTAACCCATCACGC TERM 1772 1541973 - 1541916 - R 100 -18.2 -3.1505 | gap 2, opp_overlap 1541921 1541972, overlap 1541921 AGTAGCCCGTATGAA GCGAAGCGAAATACGGGAA-AACA-ATG ATGT CATCTATCGTCCCCGTATTTCGCTTCGC TCATAGGGGCTACTT TERM 1773 1541968 - 1541921 - R 73 -9.5 -3.20723 | gap 2, opp_overlap 1541921, overlap 1541916 CCCGTATGAAGCGAA GCGAAATACGGGAA-AACA-ATG ATGT CATCTATCGTCCCCGTATTTCGC TTCGCTCATAGGGGC CBUD_1540 1542323 - 1542153 - | hypothetical protein TERM 1774 1542240 - 1542182 - G 100 -33.1 -3.17075 | gap 1, opp_overlap 1542199, overlap 1542199 TTTTTTTGAATCTAA TTTGAACTTTGGTGAAATCGCCCT-GTG TTAC CACCAGGGCGATTTCACCAAAGTTCAAA AGCCGATTATTTTTC TERM 1775 1542223 - 1542199 - G 83 -10.8 -3.54459 | gap 1, opp_overlap 1542199, overlap 1542182 TGAACTTTGGTGAAA TCGCCCT-GTG TTAC CACCAGGGCGA TTTCACCAAAGTTCA TERM 1776 1542199 - 1542223 + g 83 -10.8 -3.54459 | gap 1, opp_overlap 1542199 1542182 TGAACTTTGGTGAAA TCGCCCT-GTG TTAC CACCAGGGCGA TTTCACCAAAGTTCA TERM 1777 1543693 - 1543676 - g 79 -6.9 -4.73682 | overlap 1543677 GGCTAGAAGATAAAA TCGGCTC ACTC GAGCCGG GAAAATTTGCCGATG TERM 1778 1543692 - 1543677 - g 80 -10.4 -3.43486 | overlap 1543676 GCTAGAAGATAAAAT CGGCTC ACTC GAGCCG GGAAAATTTGCCGAT TERM 1779 1543916 - 1543900 - g 78 -2.2 -5.4477 | opp_overlap 1543890 AAATGGGCAAAAAAA GCGTTG CCTTT CAAAGC AGAAAACAGGCTTGC CBUD_1541 1542499 - 1543953 + | chlorohydrolase/deaminase family protein TERM 1780 1544223 - 1544258 + G 70 -9.8 -2.52946 | overlap 1544222 1544221 CGCTTGACGCTCATA TTTCTGAAGTGTCGGT GTTT ACGGCCGCTTCAGAAA CCTTTTCTCAAAAAA TERM 1781 1544638 - 1544615 - g 74 -4.6 -4.85599 | gap 1 GTGAGTTTAGAAAAA GGCG-TTTCAA CGA TTGATAGCGCC GTCGCAGGTTTGGGA leuA 1543940 - 1544839 + | hydroxymethylglutaryl-CoA lyase TERM 1782 1544860 - 1544845 - T 70 -5.4 -4.35518 | AAGTCGATAGTAAAA CCTCTC AACA AAGAGG CAATCGGATTAGGGT CBUD_1543 1545477 - 1544869 - | DedA family protein uvrB 1547555 - 1545537 - | excinuclease ABC subunit B TERM 1783 1547338 - 1547319 - GH 71 -2.1 -5.14965 | overlap 1547320 1547321 1547323 ATTTTCAGGAAAAAA CTCACGC ATTTCA GCGTAAA ATTGCGCGGCTAAAG aspC 1547549 - 1548820 + | aspartate aminotransferase TERM 1784 1549175 - 1549187 + Tr 74 -4.1 -5.03713 | AATTATACTGACAAT GCGTT TTA AATGC TTTTCTTTCATTATT TERM 1785 1549489 - 1549509 + Tr 72 -3.3 -5.0538 | overlap 1549491 1549494 TTTTTCTAAAATTAT TAGGAGTTT TCA AAACTTCAA TTTTTTCCCATACCG TERM 1786 1550287 - 1550310 + Tr 89 -4.6 -5.60993 | gap 1, opp_overlap 1550287, overlap 1550289 1550290 AAATAACCTAGTAAA TC-CCCTGAAC GCG GTTCAGGCTGA TTTTTTTCTACGACA TERM 1787 1550290 - 1550306 + Tr 76 -10.9 -2.72537 | opp_overlap 1550287, overlap 1550289 1550287 TAACCTAGTAAATCC CCTGAAC GCG GTTCAGG CTGATTTTTTTCTAC TERM 1788 1553384 - 1553398 + Tr 70 -2.9 -5.1166 | GTACAACATACTCCT TAAGT TTTTT ACTTA TTTTTGGTTTTGGTA CBUD_1547d 1556396 - 1556100 - | hypothetical protein TERM 1789 1557799 - 1557821 + G 70 -2.7 -5.0133 | opp_overlap 1557804, overlap 1557790 1557800 TCACTTCATTGCCCA ATGTATTGC CGGAT GCAATGCAA TTTTTTCAGCAAGTA CBUD_1547g 1557747 - 1557851 + | hypothetical protein CBUD_1551a 1558011 - 1558112 + | hypothetical protein CBUD_1551 1558287 - 1558105 - | hypothetical protein CBUD_1551b 1558642 - 1558541 - | hypothetical protein TERM 1790 1559612 - 1559641 + r 71 -4.1 -4.92655 | opp_overlap 1559619, overlap 1559619 TCCGTACTGCTGGTT CTGAAGAGCGCAC TGGA GAGCGCTTTCCTG TTTATTGTTTTTTTT CBUD_1553a 1561152 - 1561060 - | hypothetical protein CBUD_1554 1561547 - 1561185 - | glyoxalase family protein TERM 1791 1561637 - 1561672 + G 100 -14.2 -3.09516 | opp_overlap 1561637 1561643, overlap 1561643 1561661 GCTCGTATGAGCGAA GCGAAATACGGGGA CGATTATT TTCCCGTATTTCGC TTCGCTCATACGGGC TERM 1792 1561672 - 1561637 - g 86 -12 -3.09516 | opp_overlap 1561637 1561643 1561661, overlap 1561643 GCTCGTATGAGCGAA GCGAAATACGGGGA CGATTATT TTCCCGTATTTCGC TTCGCTCATACGGGC CBUD_1555 1561628 - 1561744 + | hypothetical protein CBUD_1556 1562529 - 1561879 - | ABC transporter ATP-binding protein CBUD_1557 1563701 - 1562529 - | hypothetical protein TERM 1793 1562758 - 1562741 - G 73 -3.5 -5.05301 | AAACAATGAGAAAAA TACTTGA TAAA TCAAATA AATAAAATTGAGCCT CBUD_1558 1563820 - 1563698 - | Metal-dependent amidase/aminoacylase/carboxypeptidase TERM 1794 1563990 - 1564013 + H 79 -9.6 -3.66178 | gap 1, opp_overlap 1563973 GCCAGATGGGTGACT GGCG-CGGATC AGT GATCTGACGCC TTTAGGATTGAAAAC CBUD_1558a 1564177 - 1564533 + | hypothetical protein CBUD_1559 1564829 - 1564713 - | hypothetical protein CBUD_1559a 1564914 - 1565078 + | hypothetical protein CBUD_1559b 1566246 - 1565092 - | transporter, MFS superfamily CBUD_1561 1567708 - 1566917 - | hypothetical membrane spanning protein TERM 1795 1567191 - 1567181 - G 73 -5.4 -4.68506 | overlap 1567168 AAGCAATGGCAAAAA TTGC ACG GCAA CATAAAATCGCAAAT CBUD_1562 1568856 - 1567708 - | fructose-1,6-bisphosphatase TERM 1796 1568439 - 1568425 - G 72 -7.1 -3.96696 | opp_overlap 1568424 1568425, overlap 1568421 AAGAGGAAGATTAAA TGCGC CGGGT GCGCA CTTATCGCCTGCAAA CBUD_1563 1568984 - 1570021 + | succinylglutamate desuccinylase/Aspartoacylase family protein TERM 1797 1570512 - 1570526 + G 100 -4.2 -6.02914 | overlap 1570499 1570509 TGGGGCCTCTGCTCG CCGGTG GGC CATTGG TTTTTTTTCTCTCAA TERM 1798 1570644 - 1570634 - g 91 -8.2 -4.68209 | overlap 1570635 ATCGTAAGAAACAAA CCGC GGG GCGG GGAACAAGCATTGAT CBUD_1564 1570049 - 1571329 + | transporter, MFS superfamily CBUD_1564a 1571557 - 1571438 - | hypothetical cytosolic protein TERM 1799 1571582 - 1571604 + r 74 -9.2 -3.56568 | overlap 1571588 GGCTAAGAGGGGCTT GAAGAACGCT AAC GGCGTTTTTC TTAGTATTTTAGTCT TERM 1800 1571588 - 1571598 + r 80 -4.6 -5.20606 | overlap 1571582 GAGGGGCTTGAAGAA CGCT AAC GGCG TTTTTCTTAGTATTT CBUD_1565 1572029 - 1571727 - | hypothetical protein trpR 1572386 - 1572042 - | trp operon repressor TERM 1801 1572562 - 1572590 + G 80 -10.4 -3.5393 | opp_overlap 1572565 1572585 1572586, overlap 1572565 TCTGCATTTCTTAGA GAAGCGCTTGAA GCGTA TTCAAACGCTTC TTTGGAAGAGCTAAT TERM 1802 1572587 - 1572565 - g 71 -8.5 -3.48924 | opp_overlap 1572565 1572562, overlap 1572585 1572586 GCATTTCTTAGAGAA GCGCTTGAA GCGTA TTCAAACGC TTCTTTGGAAGAGCT CBUD_1567 1572436 - 1573002 + | hypothetical membrane spanning protein TERM 1803 1574104 - 1574092 - g 78 -4.1 -5.09245 | GGAAAAGGAGAAAAA GATGC CTT ACATC AGTACCATCGAACGG CBUD_1567a 1573376 - 1574383 + | hypothetical cytosolic protein recJ 1576186 - 1574462 - | single-stranded-DNA-specific exonuclease CBUD_1571 1576627 - 1577244 + | ribosomal-protein-alanine acetyltransferase CBUD_1572 1577364 - 1578842 + | di-/tripeptide transporter TERM 1804 1578923 - 1578885 - f 100 -17.6 -3.38272 | opp_overlap 1578894, overlap 1578894 TATCATGACCCACAA GGGGATAAAGGGCTAAAA AAC TTAAAGCCCTTTATCCCC GCGCAGGCGAAATGA TERM 1805 1579413 - 1579426 + G 73 -3.7 -5.06816 | GATCGAGGATATCCC GCGCC TCAA GGCCC TTTTTATTGCGGCAT glnA 1579005 - 1580084 + | glutamine synthetase TERM 1806 1580127 - 1580113 - T 70 -8.5 -3.42574 | GCAATTCTAGTAGAA CGCGG GACGA CCGCG GCAGCAGGAGGGTGC TERM 1807 1580217 - 1580174 - T 75 -10.5 -3.09516 | gap 1, opp_overlap 1580174 GCCCGTATGAGCGAA GCGAAATACGGG-GACGATA GATGG CATCATTTCCCGTATTTCGC TTCGCTCATACGGGC TERM 1808 1580174 - 1580217 + T 72 -9.8 -3.09516 | gap 1, opp_overlap 1580174 GCCCGTATGAGCGAA GCGAAATACGGG-GACGAT AGATGGC ATCATTTCCCGTATTTCGC TTCGCTCATACGGGC CBUD_1574 1581037 - 1580270 - | DNase, TatD family CBUD_1574a 1581182 - 1581057 - | hypothetical protein TERM 1809 1581106 - 1581143 + g 100 -23.6 -4.13014 | gap 1, opp_overlap 1581095, overlap 1581110 GCAATTTTAATTTTG GCATCGTCGTCCCGCGG CTTGA CCGCGGGACGACG-TGC TTTTAAAAGTCTCAA TERM 1810 1581110 - 1581140 + g 100 -24.1 -3.09272 | opp_overlap 1581095, overlap 1581106 TTTTAATTTTGGCAT CGTCGTCCCGCGG CTTGA CCGCGGGACGACG TGCTTTTAAAAGTCT holB 1582160 - 1581201 - | DNA polymerase III, delta' subunit TERM 1811 1581294 - 1581304 + g 70 -2.6 -5.07652 | TTGTAATTCTTGTAA TAAT AGC ATTA TTTTATTTTGCGGCA TERM 1812 1581708 - 1581724 + g 70 -10.1 -2.5194 | overlap 1581707 GCGGCTGAGGATCGT CGGGAGT AAG GCTCCCG GTTGATGACTGATTA tmk 1582828 - 1582157 - | thymidylate kinase CBUD_1578 1583849 - 1582818 - | hypothetical protein TERM 1813 1583151 - 1583134 - G 71 -8.4 -3.53091 | ATTCCTTTTTTTAAA CGGCGT AAAATA ACGCCG GCGATTTTAGGACGC TERM 1814 1583371 - 1583360 - G 86 -5.8 -5.40072 | opp_overlap 1583362, overlap 1583361 1583362 TGTCGGGGAAAAAAA GTCC CTCG GGAC GAAGGTTGGTGCAAC TERM 1815 1583886 - 1583870 - R 74 -5.1 -4.67011 | AAGTTTAGTCAAAAA CTCGGCT TAA AACCAAG GTTCCGTTAGTGCCA fabF 1585103 - 1583859 - | 3-oxoacyl-[acyl-carrier-protein] synthase TERM 1816 1584803 - 1584813 + g 73 -8.2 -3.63141 | opp_overlap 1584793, overlap 1584799 CAATAGCCACCCCCA CGCG AGG CGCG TTAGTTTCGTTGATT acpP 1585402 - 1585148 - | acyl carrier protein TERM 1817 1585458 - 1585440 - R 70 -9 -3.16742 | opp_overlap 1585439 1585442, overlap 1585430 GTTAACTTCGACCAA TAGTAACA TGT TGTTACTA GTATTCAAGCGCTAT fabG 1586219 - 1585470 - | 3-oxoacyl-[acyl-carrier protein] reductase TERM 1818 1586176 - 1586194 + g 71 -3 -4.98531 | opp_overlap 1586176 1586177, overlap 1586177 CCGATGCCCCGAGAA GCGCCC GTTACGA GGGCGG TTTTTCCTTTGAGCA TERM 1819 1586252 - 1586271 + r 75 -10 -3.24232 | overlap 1586250 TTACTTCTCACCCCG CTCTCTCC TCAA GGAGAGGG TATCTTTGGGCGAAG fabD 1587236 - 1586295 - | malonyl-CoA-[acyl-carrier-protein] transacylase TERM 1820 1586655 - 1586665 + g 79 -6.8 -4.63542 | GACACTGACCGGAAT TCGC TTC GCGA TTTTTGCGCCTTCTG fabH 1588296 - 1587337 - | 3-oxoacyl-[acyl-carrier-protein] synthase III TERM 1821 1587407 - 1587393 - G 71 -9.2 -3.06009 | opp_overlap 1587392, overlap 1587383 CAAAAGCTTCTAACA GCAGCG TAT CGCCGC GCTTAATCTTGCCGG TERM 1822 1587957 - 1587935 - G 73 -8.4 -3.61764 | TCAGCAATGCTTAAA GCGTACACAA AAC CTGCGCACGC CCCATTTATGTCAAA TERM 1823 1588078 - 1588096 + g 70 -9.5 -2.85056 | opp_overlap 1588077 1588078, overlap 1588077 AATCATGTCGATAAC GGCGGGG TCTAT TCCCGCC ATTTCAATTGCACGT TERM 1824 1588209 - 1588220 + g 81 -4.4 -5.29782 | overlap 1588198 TGATCCACTCATCCG TGGT ATTA ACCA TTTTTTCTAAATCTG plsX 1589324 - 1588293 - | fatty acid/phospholipid synthesis protein rpmF 1589526 - 1589332 - | LSU ribosomal protein L32P CBUD_1586 1589670 - 1591454 + | DNA Polymerase X family CBUD_1587 1591510 - 1592544 + | phospholipase A1 CBUD_1588 1593343 - 1592636 - | bis(5'-nucleosyl)-tetraphosphatase (symmetrical) rluC 1594298 - 1593372 - | ribosomal large subunit pseudouridine synthase C TERM 1825 1595478 - 1595492 + G 76 -7.8 -4.12296 | CCAACGTGAGATTCG CCTTCC TTC GGGAGG TTCTTTAATTATCGA TERM 1826 1595502 - 1595530 + G 71 -8.9 -3.38072 | opp_overlap 1595504, overlap 1595505 GGGAGGTTCTTTAAT TATCGATCACAGC GAA GCTTTGATCGCTA TTGATATTAACTCCG TERM 1827 1595505 - 1595527 + G 73 -10.6 -2.5499 | opp_overlap 1595504, overlap 1595502 AGGTTCTTTAATTAT CGATCACAGC GAA GCTTTGATCG CTATTGATATTAACT TERM 1828 1595748 - 1595774 + G 85 -9.4 -4.17556 | overlap 1595753 AGACCGAGCTCGTAT CCAGATTGGGCG TAT CTCCCGATTTGG TTTGTTGGAAATGTC TERM 1829 1596542 - 1596558 + G 70 -9.3 -2.78816 | GTGATCACGGCGGAG GGCGGGG CGG CCCCGGC TATCATACGCAATCG CBUD_1590 1594627 - 1596789 + | ribonuclease E TERM 1830 1596798 - 1596819 + T 80 -4.4 -5.34309 | gap 1, opp_overlap 1596798 TCGGTAAATAAAAAA TCCCCAGGG CAAGT CTC-GGGGA TTTTTATTTCCTAGT TERM 1831 1596819 - 1596798 - T 83 -3.6 -5.63517 | opp_overlap 1596798 TCGGTAAATAAAAAA TCCCCAGG GCAAGT CTCGGGGA TTTTTATTTCCTAGT CBUD_1591 1598465 - 1596849 - | hypothetical membrane spanning protein TERM 1832 1597193 - 1597181 - G 80 -9.1 -4.05446 | GGGGCCAATTATAAA CCCAC GCT GTGGG AAAGTTATGAAGAAC artM 1599149 - 1598478 - | hypothetical protein TERM 1833 1599043 - 1599025 - G 88 -3 -5.75538 | overlap 1599026 TCTAAAAAAGAAAAA CCACTCTC AGA AAGTGCGG TTAATAGCGCCGCTA artQ 1599811 - 1599146 - | arginine transport system permease protein artI 1600620 - 1599811 - | arginine-binding protein artP 1601376 - 1600624 - | arginine transport ATP-binding protein TERM 1834 1600674 - 1600649 - GH 100 -9.1 -4.68384 | ACCGATGCAATAAAA TCACCAAAAAC CTGA GTCTTTGGCGA ACGGAACATTACTTC TERM 1835 1600775 - 1600794 + gH 71 -5 -4.64598 | opp_overlap 1600779 TTCATCTCATGCGTA GCAATGAC GATG GTCATTCC TTTTTGCGCTAATTC argR 1601362 - 1601949 + | arginine repressor kdsB 1602694 - 1601933 - | 3-deoxy-manno-octulosonate cytidylyltransferase TERM 1836 1602212 - 1602186 - G 74 -9.4 -3.34102 | overlap 1602184 TTATCAGAAAAAGTA TCACGGCCCCAC GGA ATGGGAGCGTGA CTAAAATAAAGCGCG TERM 1837 1602236 - 1602223 - G 73 -5.2 -4.72007 | CGTGACTAAAATAAA GCGC GTAATT GCGC CGGTTTAAAACGACT CBUD_1597a 1602854 - 1602684 - | conserved cytosolic protein TERM 1838 1602977 - 1603000 + H 85 -7.4 -4.98758 | overlap 1602979 TTTTTCTGGAGTTTA CATTCCGGCA TTCA TGTCGGAAGG TTTTTATAACTTTTT CBUD_1598 1603062 - 1603340 + | hypothetical protein CBUD_1599 1605314 - 1603350 - | hypothetical protein TERM 1839 1605338 - 1605350 + r 71 -6.9 -4.04206 | CTCAATGTCGGGAGA GGCGG CTG CTGCC TTTCTCTCCCGCTGC TERM 1840 1605421 - 1605400 - R 72 -4.3 -4.67011 | opp_overlap 1605400, overlap 1605387 AACCTGATTTAAAAA TCTGGGTCG CTTG CGGCCGAGA TTTTTCCCTTTTTGA TERM 1841 1605400 - 1605421 + r 82 -6.5 -4.92239 | opp_overlap 1605387 1605400 AACCTGATTTAAAAA TCTGGGTCG CTTG CGGCCGAGA TTTTTCCCTTTTTGA TERM 1842 1605521 - 1605542 + r 93 -8.7 -5.20328 | ACTCCATCGCTCCTG TCTCTGGCG CAAG CGCCAAAGA TTTCTTTTTTTAAAA CBUD_1601 1605840 - 1605574 - | hypothetical protein bph2_1 1606241 - 1605852 - | bacterial DNA-binding protein recQ 1608111 - 1606306 - | ATP-dependent DNA helicase TERM 1843 1608362 - 1608378 + H 71 -5.1 -4.62471 | overlap 1608372 ATCGCAGCGGGTTTT TGCCTTG ACT CAAAGCA TTTTGTATGTGGGTT TERM 1844 1609395 - 1609415 + H 78 -2.6 -5.4756 | overlap 1609396 CATTTTATGACCTAT TTCCTTTT TTATT AGAAGGAG TTTTTTCTTCAAATT CBUD_1608 1610001 - 1610657 + | purine/pyrimidine phosphoribosyl transferase CBUD_1609 1610704 - 1610907 + | hypothetical protein TERM 1845 1610948 - 1610936 - g 76 -2.7 -5.40072 | overlap 1610937 1610943 TGCCTCGTAAAAAAA CTGAA AAC TTCAA CTTTGAAGCCTCGTT TERM 1846 1610956 - 1610943 - g 70 -5.3 -4.57275 | overlap 1610937 1610936 TAAAAAAACTGAAAA CTTCA ACTT TGAAG CCTCGTTGAATGAAT xseB 1610920 - 1611168 + | exodeoxyribonuclease VII small subunit bioC.2 1612014 - 1611169 - | biotin synthesis protein TERM 1847 1612094 - 1612110 + r 84 -2.1 -5.85737 | overlap 1612097 AACCTTGATATAAGT CTTCCCA TTC TGGGTTG TTTTTTTCTTCGTCT TERM 1848 1612097 - 1612107 + r 84 -6.8 -4.96435 | overlap 1612094 CTTGATATAAGTCTT CCCA TTC TGGG TTGTTTTTTTCTTCG TERM 1849 1612417 - 1612378 - R 79 -11.6 -2.64616 | gap 1, opp_overlap 1612380, overlap 1612393 GGGGGACCCAGATTA GGGGCCTAAGAAAAACACC GAT GGCGCTTTTCTTAG-CCCT TTAGCCGAGATTCCC TERM 1850 1612380 - 1612416 + r 82 -10.9 -3.54459 | opp_overlap 1612378 1612393 GGGACCCAGATTAGG GGCCTAAGAAAAACACC GAT GGCGCTTTTCTTAGCCC TTTAGCCGAGATTCC TERM 1851 1612403 - 1612393 - R 76 -4.6 -5.06414 | opp_overlap 1612380, overlap 1612378 GGGGCCTAAGAAAAA CACC GAT GGCG CTTTTCTTAGCCCTT CBUD_1611a 1612684 - 1612589 - | hypothetical protein lpdA 1614263 - 1612839 - | dihydrolipoamide dehydrogenase aceF 1615586 - 1614276 - | dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex aceE 1618306 - 1615652 - | pyruvate dehydrogenase E1 component TERM 1852 1617965 - 1617954 - G 73 -5.8 -4.44046 | overlap 1617938 1617956 CCGACTTCAAATAAA GTCG CCAT CGAC GCGTAACTGGAAAGA ampE 1619127 - 1618351 - | beta-lactamase induction protein rosB 1620423 - 1619203 - | potassium/proton antiporter TERM 1853 1619639 - 1619607 - G 100 -11.3 -4.12532 | TCTCGGATATATAAA CTGAAACCGGTCTCG ATG CGAGACTGACTCCAG CGATAAAAGCGCCAA CBUD_1617 1620866 - 1620402 - | hypothetical protein TERM 1854 1621478 - 1621438 - g 87 -8.3 -4.56597 | overlap 1621452 CGGTCGTCCTAAAAA GACCGCTTCAAAAACGA CGAGTGC TCGTCGTCGACGCGGTC GTCCACGCAAAAAAG TERM 1855 1621467 - 1621452 - g 93 -9 -4.57837 | overlap 1621438 AGACCGCTTCAAAAA CGACGA GTGC TCGTCG TCGACGCGGTCGTCC CBUD_1618 1621094 - 1621498 + | histone H1 homolog TERM 1856 1621513 - 1621541 + T 100 -14 -4.98857 | opp_overlap 1621519, overlap 1621519 GTGCTTAGGCCGATT CAAAAAGCCCGT TATTC GCGGGCTTTTTG TTTTTGTGCTTCCCT TERM 1857 1621535 - 1621519 - T 80 -6.5 -4.66163 | opp_overlap 1621513 1621519 AGGCCGATTCAAAAA GCCCG TTATTCG CGGGC TTTTTGTTTTTGTGC TERM 1858 1621519 - 1621535 + T 100 -7.2 -5.69262 | opp_overlap 1621519, overlap 1621513 AGGCCGATTCAAAAA GCCCGT TATTC GCGGGC TTTTTGTTTTTGTGC trx 1621889 - 1621524 - | thioredoxin adk 1622618 - 1621923 - | adenylate kinase TERM 1859 1622652 - 1622698 + r 70 -5.9 -4.41348 | gap 1, overlap 1622654 1622654 GGCATCTAATTTGAC TCTATAGTTCCGTCATTCCGGC GCAA GCGGGAATGACGGA-CTCAAAA TTTGTTTCACAAAAA fimT 1623213 - 1622653 - | type 4 pili biogenesis protein (prepilin-like protein) TERM 1860 1623128 - 1623112 - G 74 -6.5 -4.56597 | CTCTTGGGCCAAAAA TGTCTGC CAA GCAGGCA CTACAAGGGAAATAA corB 1624468 - 1623215 - | magnesium and cobalt efflux protein CBUD_1623 1625013 - 1624465 - | cytochrome c assembly protein family TERM 1861 1624725 - 1624739 + g 77 -3.6 -5.09895 | overlap 1624727 AAAACCCGACGGCAA TGGTTT TAA AAACTA TTTTTTCCATGGATA TERM 1862 1625126 - 1625148 + G 71 -9.8 -2.57132 | opp_overlap 1625126, overlap 1625125 AGAATATCCAATCCA CGCTGCACGA TAT TCGTTCGGCG CTTATAGAAGCGGAC ffh 1625020 - 1626423 + | signal recognition particle, subunit FFH/SRP54 cpdP 1627447 - 1626452 - | 3',5'-cyclic-nucleotide phosphodiesterase CBUD_1625a 1627543 - 1627448 - | hypothetical protein CBUD_1627 1627582 - 1628136 + | ankyrin repeat protein CBUD_1628 1628939 - 1628229 - | hypothetical protein TERM 1863 1628456 - 1628469 + g 80 -3.8 -5.34555 | opp_overlap 1628453, overlap 1628453 TGCTAAAAAACGTGT CTGG GGCCAG CCAG TTTTTTATACTGTCA TERM 1864 1629723 - 1629713 - g 71 -4.6 -4.69559 | AAAGCTCAAAAGAAA GCCG TAG CGAC TGAAGAGCCCAAAGC rpsP 1629254 - 1629799 + | SSU ribosomal protein S16P TERM 1865 1629848 - 1629803 - f 100 -11.2 -5.40014 | overlap 1629805 AAAGAAGAATAAAAA TGCCTCTCTCATCCCGCCGC GGACAA GCGGCAGGATGACAAAGATA AGGCAATCCATTGCA TERM 1866 1629846 - 1629805 - f 91 -13.8 -2.85769 | overlap 1629803 AGAAGAATAAAAATG CCTCTCTCATCCCGCCGC GGACAA GCGGCAGGATGACAAAGA TAAGGCAATCCATTG TERM 1867 1629907 - 1629936 + G 73 -9.9 -3.06302 | CAAAGTCATCATCGG CCGCTTAGCCCGT CCCT ACGGACTGCGCGG TTGGATAAAAGTCGT rimM 1629878 - 1630384 + | 16S rRNA processing protein trmD 1630386 - 1631126 + | tRNA (guanine-N(1)-)-methyltransferase TERM 1868 1631247 - 1631228 - g 70 -5.6 -4.38472 | opp_overlap 1631241 1631246, overlap 1631229 1631233 GTGAAAGTAAAAGAA GGCAACCG TGAA CGGCTGCA AGCCTTTGAAGGCGT rplS 1631123 - 1631470 + | LSU ribosomal protein L19P CBUD_1633 1631476 - 1631991 + | o6-methylguanine-DNA methyltransferase CBUD_1634 1632288 - 1632091 - | hypothetical protein CBUD_1635 1632406 - 1632266 - | hypothetical protein CBUD_1636 1632990 - 1632403 - | hypothetical protein TERM 1869 1633023 - 1633007 - H 72 -9.5 -3.01712 | overlap 1633009 CTCTCCTCCTTAAGA GAGTCAA AAA TTGACTC AACTAACTACTATGC TERM 1870 1633737 - 1633727 - g 71 -4.6 -4.62622 | TCAATTAGAAATAAA GCCC TAT AGGC CATCACTAGCGGAGC CBUD_1637 1633224 - 1634000 + | hypothetical membrane spanning protein CBUD_1639 1634624 - 1634842 + | hypothetical protein TERM 1871 1634926 - 1634886 - f 72 -10.5 -2.65264 | opp_overlap 1634889 1634900, overlap 1634901 GGAGGATCCAGATTA GGGGGCTAAGAAAAACACC GAT GGTGCTTTTCTTAGCCTTT TAGTCTGGATTCCCG TERM 1872 1634889 - 1634923 + F 100 -18.8 -4.36931 | opp_overlap 1634886 1634901, overlap 1634900 GGATCCAGATTAGGG GGCTAAGAAAAACACC GAT GGTGCTTTTCTTAGCC TTTTAGTCTGGATTC TERM 1873 1634911 - 1634901 - f 85 -6.8 -5.06414 | opp_overlap 1634900 1634889, overlap 1634886 GGGGGCTAAGAAAAA CACC GAT GGTG CTTTTCTTAGCCTTT CBUD_1639a 1634941 - 1635060 + | hypothetical cytosolic protein CBUD_1640 1635681 - 1635160 - | mechanosensitive ion channel CBUD_1641 1637034 - 1635748 - | transporter, MFS superfamily TERM 1874 1636478 - 1636458 - G 70 -7.5 -3.79909 | overlap 1636448 TCAAACCACTAATAA CAGCCGCAA TGC CTGCAGCCG CGATCATGGAATGAC TERM 1875 1637310 - 1637334 + G 82 -8.1 -4.42047 | opp_overlap 1637308, overlap 1637312 GGATGGTAGCGAATT TTTTTGTTTTT CAA AAAAACAAAGA TTATTATTTTTTACT CBUD_1643 1637141 - 1637917 + | aminomethyltransferase family protein lysS 1639382 - 1637886 - | lysyl-tRNA synthetase TERM 1876 1638242 - 1638252 + g 75 -5.4 -4.77567 | GAGTTATAAAAATTG GTTG TTG CAAC TTTTCTTCTACGAGT TERM 1877 1639477 - 1639466 - g 71 -4.4 -4.8622 | GGGTGCAATTAAAAA TGGA GGTT TCCA ACAGGTAGCCCGTAT CBUD_1643a 1639419 - 1639517 + | hypothetical protein CBUD_1644 1639909 - 1639514 - | peptidyl-tRNA hydrolase family protein prfB 1640762 - 1639893 - | bacterial peptide chain release factor 2 (RF-2) TERM 1878 1640078 - 1640090 + g 71 -3.3 -4.94672 | CGGATTTAGAGACTT CTAGC AAA GCTTG TTTTTCCTGTTGTTT TERM 1879 1640224 - 1640243 + g 77 -10.7 -2.80796 | opp_overlap 1640216, overlap 1640223 GGCAAATGCGTGATG CGGACGG CCGAAT CCGTCCG GTTTACGTGCTGCCC TERM 1880 1640655 - 1640683 + g 77 -4.5 -5.04987 | opp_overlap 1640655 1640659, overlap 1640658 1640659 CATTTCACCGGAAAA CATACGCTGAAAT TCC ATTTCTGCGATTG TTTTTTCAAGCTGTT TERM 1881 1640658 - 1640680 + g 71 -4.8 -4.62085 | opp_overlap 1640655 1640659, overlap 1640655 1640659 TTCACCGGAAAACAT ACGCTGAAAT TCC ATTTCTGCGA TTGTTTTTTCAAGCT TERM 1882 1640679 - 1640659 - G 71 -8.3 -3.41366 | opp_overlap 1640659 1640658 1640655, overlap 1640655 TCACCGGAAAACATA CGCTGAAAT TCC ATTTCTGCG ATTGTTTTTTCAAGC CBUD_1645a 1640849 - 1641094 + | hypothetical protein CBUD_1645b 1641321 - 1641220 - | hypothetical protein TERM 1883 1642119 - 1642137 + H 78 -3.8 -5.18297 | AGCAATTCCACTCGC CATTATCG GTT CGATCGTG TTTTGTTTATTATTG TERM 1884 1644089 - 1644071 - g 71 -3 -5.05153 | opp_overlap 1644071 1644074, overlap 1644072 ATCTGAAAAAAGAAA TCCCCTCA TTA TGGGGTGA GTTTGTGCAAGATAT TERM 1885 1644239 - 1644253 + G 70 -5.8 -4.35581 | TATTTTTAACTCATT TTCTTA TGA TAAGAA TTTTGCCTCTTTTGA CBUD_1648 1643140 - 1644561 + | hypothetical protein TERM 1886 1644594 - 1644576 - f 71 -5.3 -4.64334 | gap 1, overlap 1644577 AACCCCTGAAGAAAA GGTCGAAC AAAA GTTCG-CC AGTAAAGGGCCCAGC TERM 1887 1644958 - 1644970 + G 74 -6.9 -4.33274 | CAATAAATTTATTAT CGGCG ATA TGCCG TTTTGCTCCTATCGA panB 1644713 - 1645513 + | 3-methyl-2-oxobutanoate hydroxymethyltransferase TERM 1888 1645992 - 1646006 + G 85 -5.7 -5.10461 | opp_overlap 1645992, overlap 1645986 TTACAATTGGTAAAA GGCTT AGCGG AAGCC TTTTTCTTAGATACC TERM 1889 1646232 - 1646220 - g 80 -10.5 -3.49851 | overlap 1646216 GAAGATTATAACGAA CGGCG TTT CGCCG CGGTTCACGTGGGAG panC 1645524 - 1646297 + | pantoate--beta-alanine ligase panD 1646291 - 1646626 + | aspartate 1-decarboxylase CBUD_1652 1646633 - 1648399 + | siderophore synthase TERM 1890 1648486 - 1648496 + G 100 -8.2 -5.54885 | opp_overlap 1648465 TATTTTATGAAATGC CGCC AGG GGCG TTTTTTCTTCCTCTT CBUD_1653 1648477 - 1649307 + | polysaccharide deacetylase family CBUD_1654 1649392 - 1650255 + | branched-chain amino acid aminotransferase TERM 1891 1650371 - 1650339 - f 86 -7.6 -5.09426 | gap 1, overlap 1650341 CTTAATTTCAAAAAA CCCCGTCGTCCCCGC GTAG GCGGGGACC-CAGCG CACTTCGTGCGCTGC CBUD_1655 1650441 - 1651337 + | guanine deaminase CBUD_1656 1652667 - 1651417 - | hypothetical cytosolic protein CBUD_1657 1653827 - 1653165 - | cell filamentation protein fic CBUD_1659 1654723 - 1654169 - | hypothetical protein pilE 1655369 - 1655779 + | type 4 pili biogenesis protein (prepilin-like protein) CBUD_1662 1655786 - 1655953 + | hypothetical protein TERM 1892 1655957 - 1655967 + F 76 -3.2 -5.26158 | TTTTTTATATAATAA TGAG AAT CTCG TTTCTTTTTTATTTC CBUD_1664 1656195 - 1657931 + | hypothetical membrane spanning protein CBUD_1664a 1658207 - 1658407 + | hypothetical protein CBUD_1664b 1658438 - 1658869 + | hypothetical protein TERM 1893 1658917 - 1658932 + G 79 -3.4 -5.33405 | overlap 1658914 TTGCTTTGACGCTGA TAAATA TCAT TATTTA TTTTTATTTGATCAA CBUD_1664c 1658862 - 1658963 + | hypothetical protein CBUD_1665 1660524 - 1659118 - | hydroxyurea phosphotransferase TERM 1894 1660136 - 1660124 - G 70 -7.7 -3.62096 | GGGCATGAGGCTAAA GCGTT GAC AACGC CAGCATAAACTTTAA CBUD_1667 1660667 - 1660530 - | acetyltransferase family protein CBUD_1667a 1660771 - 1660664 - | acetyltransferase family protein CBUD_1669 1661435 - 1660956 - | hypothetical protein CBUD_1670 1662005 - 1661457 - | hypothetical membrane spanning protein lspA 1662514 - 1662017 - | lipoprotein signal peptidase ileS 1665327 - 1662517 - | isoleucyl-tRNA synthetase CBUD_1673 1666126 - 1665440 - | hypothetical protein TERM 1895 1666624 - 1666638 + G 80 -3.5 -5.28683 | TTATCGCAAATTGAA GACGG CGATA CTGTC TTTTTTCGTATTACT TERM 1896 1666694 - 1666684 - g 75 -3.2 -5.09426 | CCTAATGGTAAAAAA GCCT TAA AAGC CTTAGAAGTATTGAT CBUD_1674 1666435 - 1668264 + | hypothetical protein ribF 1669344 - 1668307 - | FMN adenylyltransferase TERM 1897 1669320 - 1669295 - G 80 -4.7 -5.13741 | overlap 1669296 TGAAGTGAACAAAAA CGCGATCCTTC AGAA AAAGGACCACA GGCTAACCGAATAAT mviN 1670888 - 1669341 - | virulence factor TERM 1898 1669726 - 1669712 - G 71 -9.2 -2.96329 | opp_overlap 1669712 1669713, overlap 1669709 1669701 TTAAGTTAACAACCA CCGCCG CCG CGGCGA TTTTAACGGGGGTTT TERM 1899 1669712 - 1669726 + g 71 -7 -4.0896 | opp_overlap 1669709 1669701 1669712, overlap 1669713 TTAAGTTAACAACCA CCGCCG CCG CGGCGA TTTTAACGGGGGTTT TERM 1900 1669713 - 1669725 + g 76 -10.5 -3.04894 | opp_overlap 1669709 1669712 1669701, overlap 1669712 TAAGTTAACAACCAC CGCCG CCG CGGCG ATTTTAACGGGGGTT TERM 1901 1669930 - 1669910 - G 87 -5.3 -5.45802 | CCGCTAAAATAAAAA GTGCCACGG CCG CCGGAACAC CGATTAACATCGCCA TERM 1902 1670783 - 1670773 - G 71 -6.8 -4.17491 | ACGAAAGCGTCAAAA GCAG GCC CTGC TCCAAAGATAATGGC rpsT 1671132 - 1671404 + | SSU ribosomal protein S20P TERM 1903 1672032 - 1672062 + T 100 -12.7 -4.14739 | TCAACTTCGAGAGTT TCTGCGTTCCCTT GATCG AAGTGAACGCAGA TTTTGGCATACATAA TERM 1904 1672662 - 1672646 - T 79 -6.6 -4.63486 | opp_overlap 1672645 1672655 AGGCTGCGAATAAAA TTCACC GGGTT GGTGAA ATCAATTTCAAATTC cgtA 1675143 - 1674124 - | GTP-binding protein (probably involved in DNA repair) TERM 1905 1675270 - 1675220 - R 81 -2.5 -5.58522 | gap 1, overlap 1675222 TACATAAAAGAAAAA TCCCACTATCCGCTCCCTCTCCCG CTTA CGGGA-AAGGACTGAAGAGAGGAA ATTAGGTGGGACGGC rpmA 1675580 - 1675308 - | LSU ribosomal protein L27P rplU 1675917 - 1675570 - | LSU ribosomal protein L21P TERM 1906 1676174 - 1676231 + G 72 -9.5 -3.21354 | gap 3, opp_overlap 1676174 AGTAGCCCGTATGAA GCGAAGCGAAATACGGG--GACGATAGA CGACA TC-ATTGTTTTCCCGTATTCCGCTTCGC TTCATACGTATATGG CBUD_1685 1676123 - 1676515 + | hypothetical protein CBUD_1685a 1677378 - 1676512 - | transposase TERM 1907 1676611 - 1676625 + g 76 -7.8 -4.07687 | GCGATTCATTCCGCG GCGCTC AAT GAGTGC TTTTAACCACAGACT TERM 1908 1677745 - 1677710 - R 100 -9.2 -5.54192 | gap 1, opp_overlap 1677710, overlap 1677712 ACGAAGTTAAAAAAA GACCC-CTCAGGTAAAA TCC CTTTACCTGAGTAGATC TTCCATTACCTGAAG TERM 1909 1677742 - 1677712 - R 90 -9.8 -4.40173 | opp_overlap 1677710, overlap 1677710 GAAGTTAAAAAAAGA CCCCTCAGGTAAAA TCC CTTTACCTGAGTAG ATCTTCCATTACCTG tag 1678502 - 1677864 - | DNA-3-methyladenine glycosylase CBUD_1687 1678568 - 1679566 + | farnesyl pyrophosphate synthetase CBUD_1689 1680900 - 1680346 - | hypothetical protein TERM 1910 1681067 - 1681109 + r 91 -12.9 -3.17075 | opp_overlap 1681073 1681077, overlap 1681069 1681071 1681077 GCGACCAGCGCTGCC GATAGATGAACCGTGATAG CAATA CAATCACGGTTCATCTGTA TTCCATTACCGCAGA TERM 1911 1681069 - 1681107 + r 100 -15.5 -3.14878 | opp_overlap 1681073 1681077, overlap 1681067 1681071 1681077 GACCAGCGCTGCCGA TAGATGAACCGTGATAG CAATA CAATCACGGTTCATCTG TATTCCATTACCGCA TERM 1912 1681071 - 1681105 + r 100 -15.9 -3.1352 | opp_overlap 1681073 1681077, overlap 1681069 1681067 1681077 CCAGCGCTGCCGATA GATGAACCGTGATAG CAATA CAATCACGGTTCATC TGTATTCCATTACCG TERM 1913 1681103 - 1681073 - R 90 -13.4 -2.87211 | opp_overlap 1681071 1681069 1681067 1681077, overlap 1681077 AGCGCTGCCGATAGA TGAACCGTGATAGC AAT ACAATCACGGTTCA TCTGTATTCCATTAC TERM 1914 1681099 - 1681077 - R 70 -8.4 -3.32022 | opp_overlap 1681077 1681071 1681069 1681067, overlap 1681073 CTGCCGATAGATGAA CCGTGATAGC AAT ACAATCACGG TTCATCTGTATTCCA CBUD_1690 1681741 - 1681115 - | hypothetical protein CBUD_1691 1682547 - 1682125 - | hypothetical protein CBUD_1691a 1688526 - 1682563 - | wall-associated protein precursor TERM 1915 1685375 - 1685392 + g 73 -9.9 -2.9348 | opp_overlap 1685391 GTTTGGCGCCAACCG GCTTCGT CGTA ACGAAGC TCTGTGCCCTTTCCA TERM 1916 1686585 - 1686573 - G 70 -7.7 -3.61398 | CTTTCGTTTCAAGAA CGTTG CCC CAACG ATCCACCGTTTGAGC TERM 1917 1687634 - 1687619 - G 70 -2.5 -5.00616 | CTGGGGGTTAAAAAA GGGAT CCATCC ACCCC ACGTAAAGTGGCCTA TERM 1918 1687749 - 1687730 - G 74 -9.2 -3.32343 | opp_overlap 1687728 TGTATACGTTCACAA TGGGGCGG TAAG CCGGCCCA ACTCGTTTCAAACAT TERM 1919 1688410 - 1688424 + g 85 -9.2 -4.18018 | opp_overlap 1688407 CGCTGTTTGAAACGG CTCGGC GGT GCCGGG TTTTAAATAGCGAAA TERM 1920 1689197 - 1689212 + r 86 -7.5 -5.14563 | GGTCGTGGCTGTCCG CGCGG GCCAAG CCGCG TTTTTTCGTCAAACG TERM 1921 1689799 - 1689813 + r 85 -7.1 -4.84359 | CTCGGCTCGATGATT CGGTG AAGCG CACCG TTTTTATCAAAATCG TERM 1922 1689848 - 1689826 - R 100 -13.5 -4.25104 | CCGTTTTTATCAAAA TCGGATCGG ACTTG CCGATCCGA CGCCGACGGTGTGAG TERM 1923 1690113 - 1690103 - R 76 -6.8 -4.33808 | CAAAGGAATTGAAAA CACG ATT CGTG ACGGCCGTGGCTAAG TERM 1924 1691104 - 1691122 + r 70 -5.9 -4.41348 | TCCCCAATCGCTCGA CCTGCCG CATCA CGGTGGG TTTCTTTGACAGCGC TERM 1925 1691196 - 1691209 + r 71 -3.8 -4.86731 | opp_overlap 1691191 1691189, overlap 1691191 ACGGTAAAGACAAAC GCGA TCGTCT TCGC TTTTGTTTAAAAGGG TERM 1926 1691536 - 1691560 + r 72 -3.5 -5.10933 | overlap 1691538 TGATGATTTCTTGGC GTTGATTCGGG TTT TCAGAATCACC TTTTATTTTAGCTCG TERM 1927 1691620 - 1691630 + r 82 -8.2 -4.64657 | TCGTCACGAAATCCG CCCC TTC GGGG TTTTTAACGATTTCG TERM 1928 1691668 - 1691687 + r 85 -7 -5.03747 | opp_overlap 1691659 1691658, overlap 1691658 1691661 TCAAACCGCGACGAT CGCGCGTC GTTT GGCGGGCG TTTTTTAGAGGATTT TERM 1929 1693263 - 1693281 + r 70 -3 -5.07652 | opp_overlap 1693266 1693267, overlap 1693267 CGAATCACCTGACTC AAATCGCC CGC GGCGTTTC TTTTATTTTCACAGA TERM 1930 1693267 - 1693277 + r 88 -8.2 -5.04377 | opp_overlap 1693266 1693267, overlap 1693263 TCACCTGACTCAAAT CGCC CGC GGCG TTTCTTTTATTTTCA CBUD_1693 1696522 - 1695737 - | hypothetical protein TERM 1931 1695857 - 1695843 - G 72 -7.8 -3.85522 | opp_overlap 1695842 AATCGATGACAATAA GGCGAA ACA CTCGCC CTTACATTCCTGCGA TERM 1932 1696151 - 1696122 - G 70 -8 -3.7046 | opp_overlap 1696115 1696122, overlap 1696115 TAAAAAACCGCTAAA TTCGTTTGATTG TTATTG CAAACAAACGAA TGATTGGCGTATTCA CBUD_1695 1697128 - 1696751 - | GacS/BarA family sensor protein TERM 1933 1696975 - 1696994 + g 78 -2.2 -5.41746 | GCAATCCTATATCCA TAAAAATG AGTT CATATTTA TTTTTTTGAAACATT CBUD_1696 1697719 - 1697144 - | two component system histidine kinase TERM 1934 1699660 - 1699648 - R 81 -2.7 -5.63012 | AAAAAGAAAGAAAAA CAATA CAA TATCG CAGAGTCCACTCAAG grpB 1700375 - 1699812 - | glutamate-rich protein CBUD_1700 1700453 - 1700578 + | hypothetical protein CBUD_1701 1700595 - 1701368 + | anhydro-N-acetylmuramyl-tripeptide amidase CBUD_1702 1701805 - 1701383 - | hypothetical membrane associated protein CBUD_1703 1702183 - 1701962 - | hypothetical protein TERM 1935 1702100 - 1702118 + g 90 -6 -5.48825 | TTCTTCTTTGACAGC TCTCAAAC GCT GTTCGAGA TTTTTTTCGATAATC CBUD_1704 1703165 - 1702443 - | hypothetical protein CBUD_1705 1703719 - 1703393 - | hypothetical protein TERM 1936 1703618 - 1703584 - G 100 -11.4 -4.23674 | opp_overlap 1703584 1703582 GGGTATGAAGATAAA CGGGGCTTGGATAAGC TCG GCTTTTACAAGCACCG GCTGTGTGATCTATT CBUD_1706 1704693 - 1703722 - | ornithine cyclodeaminase TERM 1937 1704433 - 1704409 - G 76 -7.9 -4.13767 | opp_overlap 1704409 GGTTCTACTGGAAAA TGCCATCACTA AGG CATTGATGGCA GGCAAAGAATCCATT CBUD_1707 1705894 - 1704698 - | aminotransferase family protein TERM 1938 1706398 - 1706414 + G 71 -6.7 -4.1552 | TTGTCGACTTGCAAT TTTTAAC TGC GTTAAAA TTTATTCCCGACATA CBUD_1708 1706139 - 1707005 + | citrate lyase beta chain TERM 1939 1707393 - 1707377 - g 78 -2.2 -5.47218 | overlap 1707379 GCTTATCGAAAAAAA GACCCC ATCAG GGAATC GTTGTGGTGGAAACG CBUD_1709 1706989 - 1707513 + | dehydrogenase with MaoC-like domain CBUD_1711 1707660 - 1709024 + | fic family protein TERM 1940 1709099 - 1709087 - f 77 -7.7 -4.27467 | overlap 1709078 TTACAATGGAAGAAA TCCCT TCC AGGGA GGGGAGCAAGAACTA CBUD_1712 1709127 - 1710311 + | multidrug resistance transporter, Bcr family CBUD_1714 1710392 - 1710619 + | hypothetical membrane associated protein TERM 1941 1710659 - 1710707 + T 81 -12 -2.83345 | gap 1, opp_overlap 1710674, overlap 1710674 TTTCTGAATTTTCGC CTGCATAAATAAAAATCCCCGGG CAAA CCTGGGGATTTTTATTTC-GTGG TACTTGATCTGTGCG TERM 1942 1710693 - 1710674 - T 95 -9.2 -5.38054 | opp_overlap 1710659 1710674 CTGCATAAATAAAAA TCCCCGGG CAAA CCTGGGGA TTTTTATTTCGTGGT TERM 1943 1710674 - 1710693 + T 100 -11.4 -5.34309 | opp_overlap 1710674, overlap 1710659 CTGCATAAATAAAAA TCCCCGGG CAAA CCTGGGGA TTTTTATTTCGTGGT CBUD_1715 1711974 - 1710790 - | hypothetical protein TERM 1944 1711037 - 1711049 + g 73 -9.1 -3.55444 | CCAGCTGGGGCCCAC GTGGC CTC GCCAC TTTGGAGAATAGGCG TERM 1945 1711062 - 1711076 + g 70 -7.1 -3.88182 | opp_overlap 1711062 1711061 CACTTTGGAGAATAG GCGAC TCCAT GTCGC TTCGTTTTTCATTGC TERM 1946 1711247 - 1711236 - G 73 -5.8 -4.45738 | GACCGTAAGAATAAA CAGG AGAG CCTG GAAAAGGATTGTCAG phoB 1712026 - 1712772 + | phosphate regulon transcriptional regulatory protein phoR 1712753 - 1713511 + | phosphate regulon sensor protein TERM 1947 1713832 - 1713848 + G 71 -8.7 -3.31322 | overlap 1713822 TTATCGGCGTTGTCA CGGCATT ATT GATGCCG TTATGGCACCTTAGC TERM 1948 1714300 - 1714316 + G 73 -3.6 -5.06414 | opp_overlap 1714300 1714302, overlap 1714302 ATTTACGAAGAAGAA TAGCGG AAACG CCGCGA TTTTTATTAAACAAA TERM 1949 1715013 - 1714992 - g 72 -7.3 -4.05788 | opp_overlap 1715001, overlap 1714988 GTGCCTGAAATGAAA GGGGTCTCT CTGG AAAAACCCC AGTAGTATTGTTGTT CBUD_1718 1713687 - 1715018 + | phosphate transporter CBUD_1719 1715099 - 1716181 + | hypothetical peptidase TERM 1950 1716680 - 1716670 - gTf 81 -6.8 -4.70319 | overlap 1716671 TCATCAAAATTAAAA GCCA AGG TGGC CATGGACATCGTCCT CBUD_1720 1716099 - 1717304 + | metal-dependent amidase/aminoacylase/carboxypeptidase CBUD_1720a 1717464 - 1717369 - | hypothetical protein TERM 1951 1718537 - 1718554 + Gr 71 -7 -4.11484 | opp_overlap 1718537, overlap 1718532 AGCTCTTCGAGCATA CGATGC TTATTT GCATCG TTTTAAACAATTAGA TERM 1952 1718590 - 1718574 - gR 72 -3.1 -5.05301 | opp_overlap 1718568, overlap 1718568 AAACAATTAGAAAAA TTTTCAT TTT ATAAAAA TTGCACTTCTGATGG CBUD_1721 1717446 - 1718732 + | hypothetical membrane spanning protein TERM 1953 1720226 - 1720242 + Tr 91 -13.7 -2.52896 | opp_overlap 1720202 1720237 1720238 CGCACTGTGTGCGCA GCGCGCT AAA AGCGCGC TGGATTCCCGCCTGC CBUD_1724 1722298 - 1720415 - | F-box protein TERM 1954 1720453 - 1720474 + g 70 -8.1 -3.61517 | gap 1, overlap 1720456 AAGGCTTTATTTCTT CTA-TGCTCG TTT CGAGCATTAG TTCTTCAAAAGGCAT TERM 1955 1720456 - 1720470 + g 78 -10 -3.53444 | overlap 1720453 GCTTTATTTCTTCTA TGCTCG TTT CGAGCA TTAGTTCTTCAAAAG CBUD_1725 1723951 - 1722374 - | amino acid permease TERM 1956 1722488 - 1722474 - G 70 -2.8 -5.00467 | overlap 1722485 GCAATAACAATAAAA TCCC AACCAAA GGGA ATTAGGTGGTTCCCG CBUD_1726 1724161 - 1725177 + | non-proteolytic protein, peptidase family S49 TERM 1957 1726171 - 1726155 - g 76 -10.9 -2.67143 | opp_overlap 1726153, overlap 1726152 ATATTGATCATATTA CGCTTCA ACC TGAAGCG GATATTGAAGAATGT czcD.2 1725314 - 1726207 + | cobalt-zinc-cadmium resistance protein TERM 1958 1726502 - 1726487 - gf 70 -7.6 -3.61089 | opp_overlap 1726496 1726498 TCGCAAGAATTAGAA GAAGCT TTGA AGCTTC GTAACCACGGGGCTG CBUD_1728 1726253 - 1726606 + | hpt domain protein ubiG 1726566 - 1727297 + | 3-demethylubiquinone 3-methyltransferase gph 1727257 - 1727973 + | phosphoglycolate phosphatase TERM 1959 1728195 - 1728213 + G 86 -6.6 -5.00884 | overlap 1728210 ATGGATTTGTTGTCA GTGCCGTA CTC TTCGGCGC TTTTTTGGGAGCGCT TERM 1960 1728210 - 1728227 + G 70 -5.5 -4.57341 | overlap 1728195 GTGCCGTACTCTTCG GCGCTTT TTTG GGAGCGC TTTTTAGCGGCCATT TERM 1961 1729253 - 1729267 + G 85 -2.1 -5.88476 | gap 1 TTGATCGAATATCTT GGT-CC TAGC GGTACC TTTTTTATTTATTTT xylT 1728014 - 1729405 + | D-xylose-proton symporter TERM 1962 1729877 - 1729861 - g 85 -2.3 -5.88061 | opp_overlap 1729862, overlap 1729853 1729862 AAAAAATCAAAAAAA TTCTTTT GCC AAAAGAT TATTTACGATTACTT TERM 1963 1730126 - 1730090 - g 100 -15.2 -4.59773 | gap 1, opp_overlap 1730064 1730063, overlap 1730091 TGGCATCCCCAAAAA CGCCGCCGTTGTCGCCG GCGG CGGCGATAACG-CGGCA AGCGCTATTAGCGTC TERM 1964 1730125 - 1730091 - g 100 -16.5 -3.35542 | gap 1, opp_overlap 1730064 1730063, overlap 1730090 GGCATCCCCAAAAAC GCCGCCGTTGTCGCCG GCGG CGGCGATAACG-CGGC AAGCGCTATTAGCGT TERM 1965 1730456 - 1730468 + G 71 -3.3 -5.0538 | GCATAACGATCCTTA TGCCC GCG GGGTG TTTTTTGGAATGACG TERM 1966 1730877 - 1730866 - g 93 -4.4 -5.82316 | opp_overlap 1730866 AGCAGCTAAAAAAAA CGTT TGCA AACG CTTATAAACAGAAGT xylB 1729410 - 1730894 + | xylulose kinase TERM 1967 1731371 - 1731352 - g 74 -6.4 -4.42806 | opp_overlap 1731352, overlap 1731354 TCATTGCCAAAGAAA TGGAACGC ACGG GCGTTCAA TTATTATGGGGGACA xylA 1730964 - 1732274 + | xylose isomerase CBUD_1734 1733063 - 1732275 - | hypothetical protein CBUD_1735 1734030 - 1733098 - | hypothetical protein TERM 1968 1733544 - 1733558 + g 78 -5.6 -4.75288 | GACCCATAATGGTTT CAGCAG TTA CCGCTG TTTCTTTTGCTGTGA TERM 1969 1733727 - 1733708 - G 76 -2.8 -5.41143 | overlap 1733725 TAGGTTTCAAAAAAA TCTCTTGC TTTC GCAAAGGA ACTACAGTTCCCCCC CBUD_1737 1734483 - 1734367 - | hypothetical protein TERM 1970 1735228 - 1735212 - gR 93 -2.9 -5.95449 | overlap 1735213 AAATAAAAGAAAAAA CCGGCAT CGA ATACCGC GTCTGCGTCCTCGGC pfkA 1734467 - 1735465 + | 6-phosphofructokinase CBUD_1739 1736445 - 1735507 - | hypothetical cytosolic protein TERM 1971 1736020 - 1736000 - G 78 -10.5 -3.28712 | opp_overlap 1735984 TCGCTTTTTGCATAA TCGAGTAGT TTC ACTACCCGA AAATCCATCCGCAAG CBUD_1740 1736676 - 1737440 + | hypothetical membrane associated protein pepN 1740167 - 1737462 - | membrane alanine aminopeptidase TERM 1972 1737837 - 1737851 + g 75 -8.6 -3.8646 | opp_overlap 1737825 1737821, overlap 1737822 1737821 1737840 CAACCATTTGTTGAC GACCAA TGG TTGGTC TTTCCATTGTTGATA TERM 1973 1740405 - 1740390 - g 77 -10.4 -3.22091 | opp_overlap 1740387 ACCTGAAGTTATTAA GCCGGT TGAA ACCGGC CAATCGTTCGCGTCC fis 1740331 - 1740642 + | DNA-binding protein fis TERM 1974 1741134 - 1741120 - g 82 -7.8 -4.53602 | TTTAGAGGAAATAAA GACCCA TCA CGGGTC CACCACGCTGTCTAC purH 1740623 - 1742206 + | IMP cyclohydrolase CBUD_1744 1742906 - 1742223 - | acid phosphatase TERM 1975 1742648 - 1742638 - G 71 -6.8 -4.15657 | CTATAATTAGATAAA GACG TTT CGTC GATATCCAAAACCAT thiDE 1744423 - 1742984 - | hydroxymethylpyrimidine kinase TERM 1976 1743799 - 1743810 + g 70 -5.8 -4.37991 | overlap 1743805 ACGCGCAGCCCGTCC CACG CACC CGTG TTTTGGGTATTTTTG thiG 1745199 - 1744420 - | thiazole biosynthesis protein thiS 1745404 - 1745201 - | ThiS thiO 1746423 - 1745401 - | glycine oxidase thiC 1748087 - 1746423 - | thiamine biosynthesis protein TERM 1977 1746668 - 1746685 + g 74 -6.9 -4.37886 | opp_overlap 1746668 1746667, overlap 1746669 GTCCTTTTGCTAAAT CTGCGGC ATGG GCCGCAA TTTTATAAGCAATCA TERM 1978 1746669 - 1746684 + g 77 -10.4 -3.2241 | opp_overlap 1746668 1746667, overlap 1746668 TCCTTTTGCTAAATC TGCGGC ATGG GCCGCA ATTTTATAAGCAATC TERM 1979 1746811 - 1746793 - G 93 -8.8 -4.4715 | TGCCAAGCGATAAAA GCAGCGCC AAT AGCGCTAC CGATATGATCATAAC TERM 1980 1748088 - 1748039 - G 95 -9.4 -4.41348 | opp_overlap 1748053 1748056, overlap 1748020 1748041 1748042 TCTCCTTCAAATAAA CACGCAGAAGGAAAGTG-CGATGC AGCC GCATCGTCCCTTCCCTTC-GCAAG CATTATCTTGTGCAG TERM 1981 1748086 - 1748041 - G 86 -10.6 -3.81557 | opp_overlap 1748053 1748056, overlap 1748020 1748039 1748042 TCCTTCAAATAAACA CGCAGAAGGAAAGTG-CGATGC AGCC GCATCGTCCCTTCCCTTC-GCA AGCATTATCTTGTGC TERM 1982 1748085 - 1748042 - G 83 -11.9 -2.88452 | opp_overlap 1748053 1748056, overlap 1748020 1748041 1748039 CCTTCAAATAAACAC GCAGAAGGAAAGTG-CGATGC AGCC GCATCGTCCCTTCCCTTC-GC AAGCATTATCTTGTG TERM 1983 1751880 - 1751867 - g 79 -6.7 -4.68103 | CCAATTGTAATAAAA GCAAG CGGT CTTGC GGCAGGAAAAGGTGT TERM 1984 1752639 - 1752629 - g 75 -3.2 -5.24416 | GAAGCACAACAAAAA GCCT ATC AAGC GGCCCAATTAATTAC purD 1751393 - 1752706 + | phosphoribosylamine--glycine ligase TERM 1985 1752863 - 1752842 - T 100 -14.5 -4.91046 | CACAAAAGAAAGAAA TCTCTGGCG CTTG CGCCAGAGA CAAAAGCGATGGGGT TERM 1986 1752907 - 1752886 - T 77 -9.5 -3.53224 | gap 1, opp_overlap 1752886, overlap 1752869 GATGGGGTTTCCAAA GGGGAGCCAT GCA AT-GCTCCCC TTTGGTCGCCGTTAG TERM 1987 1752886 - 1752907 + T 79 -9.5 -3.74747 | gap 1, opp_overlap 1752886 1752869 GATGGGGTTTCCAAA GGGGAGCCAT GCA AT-GCTCCCC TTTGGTCGCCGTTAG TERM 1988 1752983 - 1752962 - T 77 -6.5 -4.4874 | opp_overlap 1752962 1752982, overlap 1752957 TTCAAAAAGGGAAAA TCTCGGTCA CTTG CGGCCGAGA TTTTTAATCTCAATT TERM 1989 1752962 - 1752983 + T 84 -8 -4.82154 | opp_overlap 1752957 1752962, overlap 1752982 TTCAAAAAGGGAAAA TCTCGGTC ACTTGC GGCCGAGA TTTTTAATCTCAATT CBUD_1754 1754662 - 1752968 - | acyl-CoA synthetase TERM 1990 1753123 - 1753145 + gT 75 -5.6 -4.7254 | opp_overlap 1753123 CGCGAATGCAAACTA TTTCGTGAAT TTT AATCGCGAAA TTTTTACTGACGCAT CBUD_1756 1754879 - 1754628 - | acyl carrier protein CBUD_1757 1755748 - 1754876 - | hypothetical protein TERM 1991 1756192 - 1756204 + G 74 -4.1 -5.01553 | GATCACCCGTCATTT TAGCG GCA CGTTA TTTTCTTTGTGCGTT icmH 1755942 - 1756715 + | IcmH TERM 1992 1758746 - 1758729 - Tf 77 -4.9 -4.96388 | AATTATTAAATAAAA TAGCAAA TTCT TCTGCTA CTCAAGACGAACTCA CBUD_1759 1759833 - 1759717 - | hypothetical protein TERM 1993 1760170 - 1760182 + Gr 71 -4.7 -4.63184 | opp_overlap 1760171, overlap 1760171 CCTCGGGGAAAGCCA ACGGC GGT GCCGC TTTTTGCGCTAACTT enhA.2 1759824 - 1760468 + | enhanced entry protein dnaQ 1761172 - 1760462 - | DNA polymerase III, epsilon chain TERM 1994 1760606 - 1760564 - G 70 -9.3 -2.85484 | overlap 1760561 AATTACCGACAAGGA GTCGCGATCAGTACCTA ACGGACGAA CAGATACTGATCGCGAT GCTACCGCAAAACCT rnhA 1762054 - 1761590 - | ribonuclease HI TERM 1995 1761664 - 1761676 + g 71 -6.9 -4.09685 | TTTCATTTTCGGCAT GGCCG CTA TGGCC TTTTACCCAATGCCA CBUD_1764 1762800 - 1762069 - | methyltransferase TERM 1996 1763447 - 1763435 - g 72 -7.7 -3.85567 | AATCCCAAACTTAAA CAACG CAT CGTTG AAACTGGCCAAAAAG CBUD_1765 1762865 - 1763638 + | hydroxyacylglutathione hydrolase CBUD_1767 1763775 - 1765274 + | membrane-bound lytic murein transglycosylase D precursor TERM 1997 1765401 - 1765380 - T 76 -10.9 -2.71712 | gap 1, opp_overlap 1765399, overlap 1765379 1765383 CGGGGGGCGGGAAAC CTAGCGCGCT TTC AGCGCGC-AG CGCACGTCGTGCGCT TERM 1998 1765399 - 1765383 - T 91 -13.7 -2.64155 | overlap 1765380 1765379 GGGGCGGGAAACCTA GCGCGCT TTC AGCGCGC AGCGCACGTCGTGCG TERM 1999 1765423 - 1765445 + T 70 -2.5 -5.03314 | overlap 1765402 1765399 TCGTGCGCTGGGTCC CCGCCTGCG CGGGA CGACGGTGG TTTTTTAGAAATGGC CBUD_1767a 1765662 - 1765543 - | hypothetical cytosolic protein TERM 2000 1765687 - 1765709 + H 74 -9.2 -3.56568 | overlap 1765693 GGCTAAGAGGGGCTT GAAGAACGCT AAC GGCGTTTTTC TTAGTATTTTAGTCT TERM 2001 1765693 - 1765703 + H 80 -4.6 -5.20606 | overlap 1765687 GAGGGGCTTGAAGAA CGCT AAC GGCG TTTTTCTTAGTATTT folD 1765972 - 1766823 + | methenyltetrahydrofolate cyclohydrolase TERM 2002 1766869 - 1766839 - Tf 93 -7 -5.41359 | opp_overlap 1766839 AACTAAATTAAAAAA TAGACTTCGCTA AATAACA TAACGAAGCCTA TTTTTGATTACTTAA TERM 2003 1766936 - 1766902 - Tf 91 -10.7 -4.4009 | opp_overlap 1766904 GTTGACGTCAGAAAA CAGCCTCCATCCCTC CTTTT GAGGTCTAGAGGCTG TTCGCCAGAAACAAC TERM 2004 1766984 - 1766964 - Tf 76 -6.9 -4.41206 | opp_overlap 1766955 1766967 1766972 AACTACCTGATAAAA TAACAGTGT TTA ACTCTGTTA GATATTGAACAGGTA CBUD_1769 1767701 - 1766982 - | outer membrane porin P1 TERM 2005 1767681 - 1767671 - Gf 77 -8.2 -3.91412 | opp_overlap 1767671 1767670 AGCATAGTGCAGAAA CGCC TAT GGCG AGTTTTGTAGTTGTT TERM 2006 1767763 - 1767744 - gR 70 -3.6 -4.83677 | overlap 1767739 AAAACAAAATCAAAA TAAGCCTA TATT TAAGCCTA TCTTAGCTTTTCTCA CBUD_1770 1767676 - 1767792 + | hypothetical protein TERM 2007 1767896 - 1767954 + Tr 93 -11.4 -4.614 | opp_overlap 1767907, overlap 1767902 1767907 GGATATTTAATTACA AAAAAAAAAAATGCCCATTAATTAAACG GAT TGTTTAATTAATGGGCATTTGCTTTCTA TTTTGTGTAATTAGG TERM 2008 1767902 - 1767948 + Tr 100 -14.8 -4.53648 | opp_overlap 1767907, overlap 1767896 1767907 TTAATTACAAAAAAA AAAAATGCCCATTAATTAAACG GAT TGTTTAATTAATGGGCATTTGC TTTCTATTTTGTGTA TERM 2009 1767907 - 1767943 + Tr 100 -19.1 -4.25088 | opp_overlap 1767907, overlap 1767902 1767896 TACAAAAAAAAAAAA TGCCCATTAATTAAACG GAT TGTTTAATTAATGGGCA TTTGCTTTCTATTTT TERM 2010 1767943 - 1767907 - TR 100 -18.4 -6.87161 | opp_overlap 1767907 1767902 1767896 TACAAAAAAAAAAAA TGCCCATTAATTAAAC GGATT GTTTAATTAATGGGCA TTTGCTTTCTATTTT htpG 1769866 - 1767965 - | chaperone protein TERM 2011 1770161 - 1770173 + G 91 -5.5 -5.65678 | GCGAGGACGGCAGGT GACGG TTT TCGTC TTTTTTATCTTTTCT CBUD_1773 1769921 - 1770196 + | hypothetical protein TERM 2012 1770285 - 1770234 - T 100 -13 -4.27584 | opp_overlap 1770234 1770239 1770251 1770252, overlap 1770252 ATCTCTAAGGGAAAA GCGAGGCCAAAAAAAAAAGGGGGC AGAT GCCCCCCTTTTCGATTGGCTTAGC TTACATTAAGAATTT TERM 2013 1770234 - 1770285 + T 79 -10.8 -3.18467 | opp_overlap 1770234 1770252, overlap 1770239 1770251 1770252 ATCTCTAAGGGAAAA GCGAGGCCAAAAAAAAAAGGGGGC AGAT GCCCCCCTTTTCGATTGGCTTAGC TTACATTAAGAATTT TERM 2014 1770239 - 1770280 + T 75 -10.1 -3.20991 | opp_overlap 1770234 1770252, overlap 1770234 1770251 1770252 TAAGGGAAAAGCGAG GCCAAAAAAAAAAGGGGGC AGAT GCCCCCCTTTTCGATTGGC TTAGCTTACATTAAG TERM 2015 1770251 - 1770268 + T 82 -8.3 -4.29845 | opp_overlap 1770234 1770252, overlap 1770239 1770234 1770252 GAGGCCAAAAAAAAA AGGGGGC AGAT GCCCCCC TTTTCGATTGGCTTA TERM 2016 1770252 - 1770267 + T 83 -11.8 -3.17184 | opp_overlap 1770252 1770234, overlap 1770251 1770239 1770234 AGGCCAAAAAAAAAA GGGGGC AGAT GCCCCC CTTTTCGATTGGCTT TERM 2017 1770267 - 1770252 - T 100 -11.8 -6.3578 | opp_overlap 1770251 1770239 1770234 1770252, overlap 1770234 AGGCCAAAAAAAAAA GGGGGC AGAT GCCCCC CTTTTCGATTGGCTT CBUD_1774 1770981 - 1770286 - | outer membrane protein CBUD_1775 1771100 - 1770981 - | hypothetical protein recG 1773502 - 1771388 - | ATP-dependent DNA helicase TERM 2018 1771638 - 1771614 - G 77 -3.5 -5.14563 | overlap 1771617 TGCGCCACCAAAAAA CCATCTTGCGT ATC ACGCAACAAAG TTAGGCGGGCTCGTG TERM 2019 1772660 - 1772683 + g 70 -2.5 -5.08088 | CTGAGCCGATGTTAA TTCAAACGT TAATGC ACGTTTTAA TTTTTCTTGCCAATT TERM 2020 1772898 - 1772870 - G 86 -8.9 -4.26461 | opp_overlap 1772890 1772892 ATGAACGTAAAATAA CGCCTCGGTTA ATGTCGG CAACCGAAGCG GAGTTCGTATTTCTT CBUD_1777 1773955 - 1773509 - | translation initiation inhibitor spoT 1776106 - 1773983 - | GTP pyrophosphokinase TERM 2021 1774625 - 1774612 - G 76 -6.7 -4.41616 | ATTTTTTTAAAGAAA GGGAA TAAT TTCCC AACGCTTTTTTCAAT TERM 2022 1775130 - 1775142 + g 74 -7.7 -4.05446 | GCCATGCGATCCATT TCCGT TGT ACGGA TTTGTACTTCGACAG rpoZ 1776453 - 1776160 - | DNA-directed RNA polymerase omega chain TERM 2023 1776453 - 1776463 + r 70 -5.4 -4.43351 | CTGTTACGCGTGCCA TGAG GAC CTCA TTATTTTTAAAATCT gmk 1777151 - 1776531 - | guanylate kinase yicC 1778007 - 1777144 - | protein YicC TERM 2024 1778533 - 1778548 + G 75 -9 -3.67878 | opp_overlap 1778525 1778524 1778543 GAGGAACGCGCACCG CTGCCA TTAA TGGCAG TTGTATTGCCATGAT rph 1778145 - 1778864 + | ribonuclease PH murI 1778864 - 1779706 + | glutamate racemase TERM 2025 1779807 - 1779822 + T 81 -11.8 -2.52896 | opp_overlap 1779817 1779818 CGCACTACGTGCGCT GCGCGC TAAA GCGCGC TGGATTCCCGCCTGC xth 1780741 - 1779962 - | exodeoxyribonuclease III TERM 2026 1780491 - 1780516 + g 74 -6.1 -4.57073 | TCGGCATGTTCCCAG CCTAATCGGGT GGTC ACTCGATCGGG TTTTTCGCGACAATA TERM 2027 1780709 - 1780688 - G 71 -4.4 -4.77896 | gap 1, opp_overlap 1780695, overlap 1780689 1780692 TAACCAATCGAAAAA CCAT-CGGC GAGCA GCCGCACGG ATGCCGTTTAAGTTT pyrE 1780769 - 1781416 + | orotate phosphoribosyltransferase CBUD_1787 1781413 - 1782882 + | hypothetical protein algC 1784294 - 1782879 - | phosphoglucomutase TERM 2028 1783547 - 1783573 + g 74 -5 -4.84353 | opp_overlap 1783552 1783557, overlap 1783552 GATCTGCATCGCCAT CAAAAGCCAACC CAA GGTCGGCTTGCG TTTCTTTTACTTTAT TERM 2029 1783568 - 1783552 - G 93 -10.1 -4.26076 | opp_overlap 1783552 1783547, overlap 1783557 GCATCGCCATCAAAA GCCAACC CAA GGTCGGC TTGCGTTTCTTTTAC dut 1784757 - 1784272 - | deoxyuridine 5'-triphosphate nucleotidohydrolase TERM 2030 1785189 - 1785169 - g 73 -5.4 -4.68593 | gap 1, opp_overlap 1785177 GTGATCATCCAAAAA GGCGTGCGC GGGT GCA-ACGCC GTTGAATTAGCACGC radC 1785061 - 1785735 + | DNA repair protein TERM 2031 1786053 - 1786040 - g 75 -2.4 -5.41143 | overlap 1786027 CAGTTCTCAAAAAAA TTCG GGAACG CGAA AAAGAAAGCAAATAA rpmB 1785829 - 1786068 + | LSU ribosomal protein L28P rpmG 1786079 - 1786291 + | LSU ribosomal protein L33P TERM 2032 1786294 - 1786304 + T 73 -5.4 -4.53398 | opp_overlap 1786294 1786292 AATCCCGAAATAACA CTAG GGT CTAG TTATTTTTCATCTTG CBUD_1792 1786550 - 1786305 - | ferredoxin TERM 2033 1786443 - 1786423 - G 70 -9.7 -2.52464 | opp_overlap 1786427, overlap 1786427 1786428 GGTTCGTCGAAGTGA CCAACGCAC TCT GTGCATCGG TTAGAGTTAATTTCA coaD 1787044 - 1786565 - | phosphopantetheine adenylyltransferase TERM 2034 1786631 - 1786616 - G 78 -10.4 -3.36581 | TAAAGGGGGAACGAA CGGCGA TACG TCGCCG CCGAGAGTAACGATT TERM 2035 1787062 - 1787116 + r 78 -2.8 -5.38249 | gap 1, overlap 1787063 TAGCGCCTTTGTATC ACCCTCTTT-CTCCAACCCTTTCCC CCTAAA GGGAAAAGGAAGTAGTGAAGAGGGG TTTTTTATAATTCGT folK 1787601 - 1787041 - | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase TERM 2036 1787320 - 1787307 - G 75 -5.3 -4.84311 | CTCCATACAATAAAA TATCG AGAT CGATA ATCCGCGGCCCCCAT pcnB 1788917 - 1787598 - | poly(A) polymerase TERM 2037 1788112 - 1788124 + g 74 -7.7 -4.06903 | TCCGGGAATAAAGTT CGCAT ATA ATGCG TTTGCTTTAACAATT CBUD_1797 1789469 - 1789149 - | hypothetical protein TERM 2038 1789216 - 1789203 - G 70 -8.1 -3.63515 | TTTCATTTTTAACAA CGCAC AAAT GTGCG CTACGGAAGCCAGTG CBUD_1798 1789700 - 1789473 - | hypothetical cytosolic protein TERM 2039 1789655 - 1789684 + g 80 -11.5 -2.66216 | opp_overlap 1789651, overlap 1789654 1789657 TTTTAAGTGAACTGC TATGCGGCAATCG AAGC CTGTTGCCGCATA ATTCTAATAATGCCA TERM 2040 1789657 - 1789682 + g 72 -9.7 -2.87243 | opp_overlap 1789651, overlap 1789655 1789654 TTAAGTGAACTGCTA TGCGGCAATCG AAGC CTGTTGCCGCA TAATTCTAATAATGC CBUD_1799 1789861 - 1789688 - | hypothetical protein TERM 2041 1790044 - 1790028 - R 79 -9.5 -3.62572 | opp_overlap 1790039, overlap 1790038 CAGCAGCATTTTAAA GTTGACA AAT TGTCAAC TTCGAGTCGACTTGT CBUD_1801 1791405 - 1790581 - | hypothetical membrane spanning protein CBUD_1802 1791457 - 1792398 + | hypothetical protein TERM 2042 1792425 - 1792443 + G 78 -5.2 -4.98128 | overlap 1792427 AAAAGATATGTAGTT TTGGCGTT GTT GACGCCCA TTTATTTTTGCTTAT CBUD_1803 1792392 - 1793159 + | hypothetical protein TERM 2043 1793306 - 1793320 + T 76 -4.3 -5.02074 | overlap 1793301 GGGGTTGTGAGGTGA GTAGA ATTCA TCTAC TTTTTTAAACCCTGC TERM 2044 1793412 - 1793432 + T 90 -4.8 -5.63504 | opp_overlap 1793412 CCCTTAGTAAAATAA TATGCTGA CTTTC TCAGTATA TTTTTTTGTGAGATT CBUD_1803a 1793938 - 1793489 - | hypothetical protein TERM 2045 1793940 - 1793919 - G 95 -3 -6.06723 | overlap 1793920 TTTTCTAAAAAAAAA CCGTAATC GATTTT GATCACGA CGCGACATTTTATGT TERM 2046 1794779 - 1794814 + H 93 -13.6 -3.14132 | opp_overlap 1794784 1794786, overlap 1794782 CGATTCCCATACTTC CAACATATCCAGTATT AGAA AATACTGCATATGTTG TTACTCACAGAACGC TERM 2047 1794782 - 1794811 + H 79 -9.5 -3.71848 | opp_overlap 1794784 1794786, overlap 1794779 TTCCCATACTTCCAA CATATCCAGTATT AGAA AATACTGCATATG TTGTTACTCACAGAA TERM 2048 1795005 - 1795028 + H 71 -3.8 -4.85782 | opp_overlap 1795005 1795008, overlap 1795008 CCCACCATGAAACAT TAAGTAAGGC ATTA GCCATACCTA TTTATTTTTGCGAGC TERM 2049 1795953 - 1795932 - g 80 -8.9 -4.07568 | TTGTTTTTCCTAAAA TTCTCTTTA GGAA TAAAGAGAA TATGAAAAGTTCGCT CBUD_1806 1795469 - 1796164 + | hypothetical protein CBUD_1808 1797594 - 1796602 - | transposase TERM 2050 1798842 - 1798823 - g 79 -10.8 -3.21126 | opp_overlap 1798821 AAGGAGAGCGATCAA GGCAGTTT TTTG AAACTGCC GCATTTGCACCCATC CBUD_1809 1797754 - 1799277 + | hypothetical protein TERM 2051 1799464 - 1799451 - T 80 -4.5 -5.30348 | opp_overlap 1799451 ACCCAAGAATAAAAA GCGAA GTTG CTCGC TTTTATGCCTATAGA TERM 2052 1800939 - 1800985 + T 73 -2.3 -5.19879 | gap 1, overlap 1800946 1800947 1800948 TCACAGCCATTTCAA TTTTAGGTTTCGTCATTCCCGC GCAG GCGGG-ATGACGGGCTTTTAAG TTTTTGTCTTTACCA TERM 2053 1800946 - 1800978 + T 79 -7 -4.5115 | gap 1, overlap 1800939 1800947 1800948 CATTTCAATTTTAGG TTTCGTCATTCCCGC GCAG GCGGG-ATGACGGGC TTTTAAGTTTTTGTC TERM 2054 1800947 - 1800977 + T 77 -10.5 -3.29063 | gap 1, overlap 1800946 1800939 1800948 ATTTCAATTTTAGGT TTCGTCATTCCCGC GCAG GCGGG-ATGACGGG CTTTTAAGTTTTTGT TERM 2055 1800948 - 1800976 + T 81 -11.8 -2.55811 | gap 1, overlap 1800947 1800946 1800939 TTTCAATTTTAGGTT TCGTCATTCCCGC GCAG GCGGG-ATGACGG GCTTTTAAGTTTTTG CBUD_1812 1803067 - 1801040 - | catalase HPII TERM 2056 1801208 - 1801197 - G 70 -5.8 -4.39571 | CCCATAAATTTAAAA TGCG AAAA CGCA TCAACAAGGAAATCA TERM 2057 1801394 - 1801411 + g 70 -2.7 -5.0133 | overlap 1801382 1801399 TGTGGCGATTGTGGC GCCTT CTTTTTCA AAGGC TTTTTTCACGGCATA TERM 2058 1802484 - 1802469 - G 73 -5.4 -4.73108 | overlap 1802472 TCCATAAAACGAAAA GAACGA GGAA TCGCTC GGTCTGACATCACCC TERM 2059 1802741 - 1802784 + g 71 -2.3 -5.16472 | opp_overlap 1802734, overlap 1802734 1802773 GGCTAAATCGGGAGA CCCCTGGCTTCCAACGACT GTCGAA AATCGTACGAAAACAGGGG TTTTTTCGCCTTTTT TERM 2060 1803033 - 1803049 + g 91 -3.7 -5.77571 | overlap 1803034 GTTGTTAAGTTTAGG TCTTCAT TTT GTGAAGG TTTTTGTTTTTTAGT TERM 2061 1803952 - 1803926 - H 74 -6.4 -4.42062 | opp_overlap 1803924 1803926 TACTCCTGAAATAAA CCGCGGATTTGG TGG CCAATAGCGCGG TATTTTTCCATATTG CBUD_1814 1804319 - 1805146 + | amidinotransferase family protein CBUD_1815 1805763 - 1805170 - | MarC family integral membrane protein CBUD_1815a 1805811 - 1805963 + | hypothetical protein CBUD_1816 1807167 - 1806016 - | rubredoxin-NAD(+) reductase TERM 2062 1806833 - 1806804 - GT 70 -7.9 -3.64371 | AATGGACATCCGAAA CGG-CGTCGCCCT GCAAAG AGGGCG-CGACCG GGTAAGAACCACAGG hemE 1808344 - 1807136 - | uroporphyrinogen decarboxylase TERM 2063 1807311 - 1807291 - GH 82 -8.3 -4.15565 | opp_overlap 1807288 1807291 1807293 CGTAGGATTTTAAAA TATCGACGG CCG CTGTCGATA TGCTTTCAGGGTTTG TERM 2064 1807291 - 1807311 + gH 76 -10.5 -2.93381 | opp_overlap 1807291, overlap 1807288 1807293 CGTAGGATTTTAAAA TATCGACGG CCG CTGTCGATA TGCTTTCAGGGTTTG TERM 2065 1807425 - 1807449 + gH 71 -7.1 -3.90328 | CAATCTAACCCTACC GCATCACAACC ACT GTTTGCGATGC TTTCTAACCATTGTC TERM 2066 1807724 - 1807734 + gH 70 -5.4 -4.33274 | AAGCATGGCTCTGGC CGTT AGA AACG TTTTGCTGCTCTGAC TERM 2067 1808333 - 1808295 - Gg 72 -9.5 -3.07816 | opp_overlap 1808303 1808323, overlap 1808301 CCTGTATGGAGCGAA GCGAAATACGGGTGCTG CGCAT CGGTTCCCGTATTCCGC TGGCGCTCCATACGG CBUD_1819 1808285 - 1808452 + | hypothetical protein uvrA 1811395 - 1808531 - | excinuclease ABC subunit A TERM 2068 1811496 - 1811534 + H 100 -16.2 -3.07816 | opp_overlap 1811496 1811504, overlap 1811504 CCCGTATGGAGCGAA GCGGAATACGGGGA TTGTTCTAATT TCCCCGTATTCCGC TTCGCTCCATACGGG TERM 2069 1811534 - 1811496 - H 100 -16.2 -3.07816 | opp_overlap 1811496 1811504, overlap 1811504 CCCGTATGGAGCGAA GCGGAATACGGGGA TTGTTCTAATT TCCCCGTATTCCGC TTCGCTCCATACGGG CBUD_1821 1811648 - 1812394 + | hypothetical protein TERM 2070 1813483 - 1813493 + G 77 -8.2 -3.93038 | opp_overlap 1813482 1813478 TCGCCACAAGGGAAC CGCC ATG GGCG TTTACTCTTCCGCTC CBUD_1822 1812482 - 1813858 + | transporter, MFS superfamily TERM 2071 1814349 - 1814359 + G 74 -6.8 -4.32436 | GCTGGAGACGACAGT TCGG TGG CCGA TTTTGATGATGATAT ssb 1813908 - 1814384 + | single-strand DNA binding protein TERM 2072 1814426 - 1814387 - T 95 -14.5 -3.01924 | gap 1, opp_overlap 1814393, overlap 1814390 TATTCCGTTTTAATA GCATTACTGTCACTCCGG GTTTT CCGGAGTGACAGTTAT-C GAAGGAATAGCCTTC TERM 2073 1814424 - 1814390 - T 100 -17.3 -2.73875 | opp_overlap 1814393, overlap 1814387 TCCGTTTTAATAGCA TTACTGTCACTCCGG GTTTT CCGGAGTGACAGTTA TCGAAGGAATAGCCT TERM 2074 1814393 - 1814421 + T 100 -19.7 -3.29144 | opp_overlap 1814390 1814387 GTTTTAATAGCATTA CTGTCACTCCGGG TTT TCCGGAGTGACAG TTATCGAAGGAATAG CBUD_1824 1815616 - 1814396 - | short-chain alcohol dehydrogenase TERM 2075 1816170 - 1816134 - R 89 -9.6 -4.21773 | opp_overlap 1816146, overlap 1816146 CCTTAACAGAAAGAA GGGTCAGAAAAAGAAG GGAGG CTTCTTTTTCTGAAGC TAGAATAAAACTTTG TERM 2076 1816146 - 1816158 + r 70 -3.4 -4.84359 | opp_overlap 1816134 1816146 GAAGGGTCAGAAAAA GAAG GGAGG CTTC TTTTTCTGAAGCTAG TERM 2077 1816158 - 1816146 - R 70 -3.4 -4.8543 | opp_overlap 1816146, overlap 1816134 GAAGGGTCAGAAAAA GAAG GGAGG CTTC TTTTTCTGAAGCTAG CBUD_1827 1818374 - 1817148 - | glucose/galactose transporter TERM 2078 1817260 - 1817248 - G 70 -7.7 -3.59649 | AAAGAATGTTGCAAA CCGAT ATA ATCGG CAAGTAACCCTTGTA TERM 2079 1817719 - 1817707 - G 82 -7.7 -4.564 | overlap 1817713 AATCCTAAAGTAAAA GGAAG ATG CTTCC ATAAAGCAAAATCAA rplQ 1818757 - 1818377 - | LSU ribosomal protein L17P rpoA 1819752 - 1818769 - | DNA-directed RNA polymerase alpha chain rpsD 1820385 - 1819765 - | SSU ribosomal protein S4P rpsK 1820769 - 1820398 - | SSU ribosomal protein S11P rpsM 1821156 - 1820797 - | SSU ribosomal protein S13P CBUD_1832a 1821256 - 1821161 - | hypothetical protein TERM 2080 1821267 - 1821304 + r 100 -24.3 -4.13014 | gap 1, overlap 1821271 GCCATTCTAATTTTG GCATCGTCGTCCCGCGGT CAA GCCGCGGGACGACG-TGC TTTTAAAAGTCTCAA TERM 2081 1821271 - 1821301 + r 100 -24.8 -3.09272 | overlap 1821267 TTCTAATTTTGGCAT CGTCGTCCCGCGGT CAA GCCGCGGGACGACG TGCTTTTAAAAGTCT TERM 2082 1821551 - 1821569 + r 83 -5.2 -5.26875 | opp_overlap 1821542, overlap 1821555 GAATAAGCCCAAACT TCGAGCCT TTC AGGCCTGA TTTTTTCATTAAGGA secY 1822859 - 1821531 - | protein translocase subunit TERM 2083 1821727 - 1821708 - G 78 -4.2 -5.0925 | overlap 1821709 1821710 GGCCAAAATCAAAAA CTGTGGCA GCAA TGCCACCA ATGCAAGGTAAACAG TERM 2084 1822395 - 1822368 - G 75 -8.4 -3.78034 | overlap 1822365 1822371 TAGCCACATTAAGAA CATCGTCCCCGT CACC AAGGTGACGATG GCGGTGAAGTAAAAT rplO 1823308 - 1822877 - | LSU ribosomal protein L15P TERM 2085 1822962 - 1822980 + g 70 -6 -4.26079 | overlap 1822964 1822973 GTCACTGGCTTCTCT AATTTGCC GGC GGCAAATA TTTTGACTCGTTTGA TERM 2086 1822964 - 1822978 + g 73 -8.6 -3.72347 | overlap 1822962 1822973 CACTGGCTTCTCTAA TTTGCC GGC GGCAAA TATTTTGACTCGTTT TERM 2087 1823208 - 1823220 + g 100 -10.5 -4.74103 | TGTTGCCCCTTATGT CCGCG ACC CGCGG TTTTTCCCTTGCCGC rpmD 1823502 - 1823311 - | LSU ribosomal protein L30P rpsE 1824012 - 1823506 - | SSU ribosomal protein S5P rplR 1824377 - 1824024 - | LSU ribosomal protein L18P TERM 2088 1824334 - 1824359 + g 100 -9.7 -5.2204 | overlap 1824338 TCTTTGATTTTTGCT CGTGTTCGACG CGCG CGTCGAATTCG TTTTTCTTGCTTATC TERM 2089 1824338 - 1824355 + g 86 -9.9 -3.94974 | overlap 1824334 TGATTTTTGCTCGTG TTCGACG CGCG CGTCGAA TTCGTTTTTCTTGCT rplF 1824913 - 1824377 - | LSU ribosomal protein L6P rpsH 1825352 - 1824951 - | SSU ribosomal protein S8P rpsN 1825645 - 1825346 - | SSU ribosomal protein S14P rplE 1826198 - 1825650 - | LSU ribosomal protein L5P TERM 2090 1826008 - 1826020 + g 70 -2.7 -4.95758 | TAGGTGATGAGGGGT TTTTG CCC CGAAA TTTTTATCATGTCAT rplX 1826638 - 1826315 - | LSU ribosomal protein L24P rplN 1827018 - 1826650 - | LSU ribosomal protein L14P rpsQ 1827280 - 1827029 - | SSU ribosomal protein S17P rpmC 1827488 - 1827291 - | LSU ribosomal protein L29P rplP 1827902 - 1827489 - | LSU ribosomal protein L16P rpsC 1828597 - 1827914 - | SSU ribosomal protein S3P rplV 1828944 - 1828597 - | LSU ribosomal protein L22P rpsS 1829231 - 1828944 - | SSU ribosomal protein S19P rplB 1830071 - 1829244 - | LSU ribosomal protein L2P TERM 2091 1829440 - 1829469 + g 70 -7.9 -3.679 | CGCCCTCGCCAACGT TTTGCGCCTGCTT TACC AAGTGAGCGCAAA TTATGTTCCGAGTTT rplW 1830378 - 1830091 - | LSU ribosomal protein L23P rplD 1830995 - 1830375 - | LSU ribosomal protein L1E (= L4P) rplC 1831645 - 1830992 - | LSU ribosomal protein L3P rpsJ 1832014 - 1831667 - | SSU ribosomal protein S10P tuf2 1833382 - 1832189 - | protein translation elongation factor Tu (EF-TU) fusA 1835497 - 1833398 - | protein Translation Elongation Factor G (EF-G) TERM 2092 1835173 - 1835156 - G 75 -5.5 -4.84311 | GCCCACAGAACAAAA GACAGCG ACAG CGCCATC TAACACGCGCAGGGA rpsG 1836082 - 1835507 - | SSU ribosomal protein S7P rpsL 1836517 - 1836095 - | SSU ribosomal protein S12P TERM 2093 1836642 - 1836690 + r 100 -16.3 -3.09516 | opp_overlap 1836642, overlap 1836648 1836658 GCCCGTATGAGCGAA GCGAAATACGGGATGATAGATGA CAT TCATTTGTTTTTCCGTATTTCGC TTCGCTCATACGGGC rpoC 1841056 - 1836812 - | DNA-directed RNA polymerase beta' chain TERM 2094 1839227 - 1839259 + g 95 -7.8 -5.1861 | TTTCAGTCCTAAATT GCGGTAGCAGAAGT CAAGT AATTTTGTTACCGC TTTTTTCGTCATCGG TERM 2095 1841247 - 1841278 + r 90 -9.4 -4.33907 | overlap 1841248 1841249 CTTTCATCTTTAGGC TTCGTCATTCCCGC ACAA GCGGAGATGACGGG TTTTAAGTCTTTCTG TERM 2096 1841248 - 1841277 + r 79 -10.7 -3.1926 | overlap 1841247 1841249 TTTCATCTTTAGGCT TCGTCATTCCCGC ACAA GCGGAGATGACGG GTTTTAAGTCTTTCT TERM 2097 1841249 - 1841276 + r 81 -12 -2.50471 | overlap 1841248 1841247 TTCATCTTTAGGCTT CGTCATTCCCGC ACAA GCGGAGATGACG GGTTTTAAGTCTTTC rpoB 1845458 - 1841325 - | DNA-directed RNA polymerase beta chain TERM 2098 1845180 - 1845164 - G 79 -7.9 -4.28254 | CCTCAACATCGAAAA GGGTGGA TTC TCCCCCC AAACTGTAACCTACG TERM 2099 1845381 - 1845394 + g 79 -8.1 -4.38712 | opp_overlap 1845380 GCGTTTCCCTAAATT GACGC GCGC GCGTC TTTTCTCAGGATAAG CBUD_1862a 1845592 - 1845473 - | hypothetical protein rplL 1845985 - 1845605 - | LSU ribosomal protein L12P (L7/L12) rplJ 1846543 - 1846019 - | LSU ribosomal protein L10P TERM 2100 1846393 - 1846413 + g 91 -8.1 -4.7497 | opp_overlap 1846384, overlap 1846396 GATACACGCGCATAT GCACGCGCG CTT CGCGAGCGC TTTTTCGTAAGTCGG TERM 2101 1846396 - 1846412 + g 76 -9.3 -3.445 | opp_overlap 1846384, overlap 1846393 ACACGCGCATATGCA CGCGCGC TTC GCGAGCG CTTTTTCGTAAGTCG TERM 2102 1846487 - 1846517 + g 77 -3.9 -5.0916 | overlap 1846462 1846506 CGAAACTGCTTGATT GGCGATGTCTGTG ATTTC CGCAACCATTGCC TTTTTCTGTTCGAGA TERM 2103 1846591 - 1846572 - R 86 -9.4 -3.99324 | opp_overlap 1846576, overlap 1846576 CGTTATTATTACAAA GAAATAGC TCTT GCTATTTC CACCGTTTCGGTGAC TERM 2104 1846677 - 1846717 + r 71 -4.8 -4.58424 | gap 2, opp_overlap 1846662, overlap 1846680 1846681 1846712 CCATCAGGTACTCAC GGTCTTCGACGGTTAACGTC AAT GACGTCTACCG-CGAA-ATC TTTTCTATCGTCATC rplA 1847495 - 1846797 - | LSU ribosomal protein L1P TERM 2105 1847205 - 1847234 + g 70 -2.7 -4.93318 | gap 1, opp_overlap 1847205 AGCGAGATCATCCAA GCCAACGATGTCCG CTC CGG-CTGCTTTGGC TTTTTCTACATTATC rplK 1847932 - 1847495 - | LSU ribosomal protein L11P TERM 2106 1847748 - 1847736 - G 86 -3.3 -5.62288 | overlap 1847737 GTAATAAAAGAAAAA GTGCG ATC CGCAT ACACCGTGATAATGA nusG 1848623 - 1848057 - | transcription antitermination protein secE 1849031 - 1848648 - | protein translocase subunit tuf1 1850469 - 1849276 - | protein translation elongation factor Tu (EF-TU) TERM 2107 1850576 - 1850592 + r 70 -9.5 -2.62616 | opp_overlap 1850588 TTGAACCGGTGACCT CTTCCTT ACC AAGGAAG TGCTCTACCGCCTGA TERM 2108 1850784 - 1850732 - R 70 -9.2 -3.20633 | opp_overlap 1850734 1850735 1850736, overlap 1850725 1850765 1850766 GCAGAAGACAGTGAA GCTGTGCGGCTTCGCCGCAATATA TTTTT TAAATTGTCGCGAAGCGACACAAC CATCTGTCTTCTTTC TERM 2109 1850735 - 1850751 + r 70 -7.9 -3.68677 | opp_overlap 1850725 1850732, overlap 1850734 1850736 GAAGACAGTGAAGCT GTGCGGC TTC GCCGCAA TATATTTTTTAAATT TERM 2110 1850736 - 1850750 + r 80 -11.4 -2.79579 | opp_overlap 1850725 1850732, overlap 1850735 1850734 AAGACAGTGAAGCTG TGCGGC TTC GCCGCA ATATATTTTTTAAAT TERM 2111 1850780 - 1850766 - R 72 -10 -2.7395 | overlap 1850765 1850732 ATATATTTTTTAAAT TGTCGC GAA GCGACA CAACCATCTGTCTTC TERM 2112 1850958 - 1850933 - R 93 -6.9 -5.38497 | ACTCAAATCAAAAAA TGAAAGAACCC TGTC GGGCTTTTTCA CCGATGCCATACACA TERM 2113 1851061 - 1851048 - R 71 -3.8 -4.86385 | ATGTGGAAAAAGAAA GGCT TTGGTC AGCC TGGGGCCCAATCAAA mtaA 1851787 - 1851056 - | 4'-phosphopantetheinyl transferase TERM 2114 1851378 - 1851368 - G 74 -4.6 -4.85599 | opp_overlap 1851368 CTCAGGCGAGAAAAA CCGC TCG GCGA TTTGCTCGGCGTGAA TERM 2115 1851737 - 1851755 + g 100 -10.3 -4.29396 | opp_overlap 1851749 CCACACATGCACATC GCCTTCG AGAAG CGAAGGC TTTTCGTCAATAATT CBUD_1876 1851899 - 1851780 - | hypothetical protein cydB2 1853051 - 1851906 - | cytochrome d ubiquinol oxidase subunit II cydA2 1854610 - 1853060 - | cytochrome d ubiquinol oxidase subunit I CBUD_1878a 1854835 - 1854695 - | hypothetical protein TERM 2116 1854967 - 1855001 + r 100 -14.4 -4.08692 | opp_overlap 1854964 1854979 GGACCCAGATTAGGG GGCTAAGAAAAACACC GAT GGCGCTTTTCTTAGCC TTTTAGCCGGGATTC TERM 2117 1854989 - 1854979 - R 76 -4.6 -5.06414 | opp_overlap 1854967, overlap 1854964 GGGGGCTAAGAAAAA CACC GAT GGCG CTTTTCTTAGCCTTT CBUD_1878b 1855211 - 1855116 - | hypothetical protein CBUD_1880 1857512 - 1855236 - | hypothetical protein TERM 2118 1856519 - 1856529 + g 70 -2.6 -4.9792 | opp_overlap 1856519 AGCCCAATTTAAAAA TATT AAC AATA TTTTTATGTCGACTC TERM 2119 1858619 - 1858630 + G 73 -7.2 -4.12942 | GCTTTGAATGGTTCT GCCG CTAT CGGC TTTTCCACCGTTTCC CBUD_1881 1857626 - 1859224 + | NlpC-P60 family protein TERM 2120 1859268 - 1859249 - T 100 -7.8 -5.80364 | opp_overlap 1859249 ATCTGAAGAAAAAAA GGCGCC TTCAAATC GGCGCC TTTTTTCAATTTATC TERM 2121 1859249 - 1859268 + T 91 -7.8 -5.24449 | opp_overlap 1859249 ATCTGAAGAAAAAAA GGCGCC TTCAAATC GGCGCC TTTTTTCAATTTATC CBUD_1882 1859998 - 1859279 - | integral membrane protein TERM 2122 1859646 - 1859629 - G 73 -8.4 -3.6914 | overlap 1859625 ACCCCAAGAAAGCAA CGCTGG TGACGG CCAGCG CATCGAAGACGTTTT CBUD_1883 1860382 - 1860540 + | hypothetical protein CBUD_1884 1861935 - 1860679 - | hypothetical membrane spanning protein TERM 2123 1860848 - 1860876 + g 71 -9.8 -2.70661 | gap 1, overlap 1860847 GAATTCCCCTCCCGG CTTTTCTCCTCTG CCCT CA-AGGAGAAAAG GTTATGGTGTCTATT TERM 2124 1861283 - 1861305 + g 80 -6.2 -4.74801 | opp_overlap 1861273 GACAACCGACGTGAT TCGGATGTGC TAG GCGCTTCTGA TTTTTCCTCCGGTTC TERM 2125 1862006 - 1861979 - R 75 -2.6 -5.26316 | opp_overlap 1861986 1862002, overlap 1861982 TTATGCTATAAAAAA GAACGTAGCGTA AATA TTCGCTGCGTTA AGAGACGATTATAAA TERM 2126 1862003 - 1861982 - R 72 -4.3 -4.72201 | opp_overlap 1861986 1862002, overlap 1861979 TGCTATAAAAAAGAA CGTAGCGTA AATA TTCGCTGCG TTAAGAGACGATTAT CBUD_1885 1863235 - 1862219 - | hypothetical protein TERM 2127 1862409 - 1862424 + gr 74 -6.2 -4.35017 | GTTGGCAAACCTTCA TTGGTA CCGA TACCAA TTTCTTCAATTTTTC CBUD_1886 1863347 - 1863207 - | hypothetical protein CBUD_1886a 1865479 - 1863455 - | hypothetical protein TERM 2128 1864017 - 1864032 + g 72 -6.2 -4.25056 | TCTTGTATTACTCCC TCTCTT TGGG AAGAGA TTTGTTGATACCGTC TERM 2129 1864285 - 1864271 - G 70 -2.8 -5.06414 | opp_overlap 1864271 CCTTTCTAATAAAAA GGAGAA TAT TTCTGC TATTCCATTTGAAAT TERM 2130 1864637 - 1864647 + g 84 -5.4 -5.28176 | opp_overlap 1864637 TTTCATTTTTACCAA TGCT TGC AGCA TTTTTTCTGCATAGG CBUD_1888 1866588 - 1865674 - | transporter, drug/metabolite exporter family CBUD_1888a 1866726 - 1866631 - | hypothetical protein CBUD_1888b 1867227 - 1866922 - | hypothetical protein TERM 2131 1867328 - 1867344 + r 70 -9.5 -2.62616 | opp_overlap 1867322 TCGAACCTACGACCG GCTGATT ACA AATCAGC TGCTCTACCGACTGA CBUD_1891 1867869 - 1867477 - | hypothetical membrane spanning protein TERM 2132 1867760 - 1867746 - G 71 -4.2 -4.89477 | CGTTTAATAATAAAA CTCCTC GCT GAGTAG CAAAATCCTTTAGCA gltX2 1869352 - 1867931 - | glutamyl-tRNA synthetase TERM 2133 1868270 - 1868257 - G 73 -3.7 -4.96501 | opp_overlap 1868257 CTTGATAAAAATAAA GGCTC CGCT GCGCC ATTTCCTTGAGTGTT TERM 2134 1868964 - 1868989 + g 75 -3.3 -5.12785 | gap 1 GGTGCTTTATCGCGA CAAAAACCGTCG TAG CGG-GGCTTTTG TTTATTTTTTAATTG TERM 2135 1869184 - 1869171 - G 70 -8.1 -3.64488 | opp_overlap 1869171, overlap 1869169 AAGCCTTCTAAAATA GCGTC AACC GACGC TTGAGTCGAACGCGC TERM 2136 1869385 - 1869432 + H 93 -13.6 -3.1544 | gap 1, opp_overlap 1869375 1869397 GAAAACAGCGATCCC CTGCTCAACTAACGCGCCATTTC CCC GAAATGGCGCGTTAGA-GAGAAC TTGAATATGCTGTGA TERM 2137 1869421 - 1869397 - H 100 -18.7 -3.33696 | opp_overlap 1869385 CCCCTGCTCAACTAA CGCGCCATTTC CCC GAAATGGCGCG TTAGAGAGAACTTGA CBUD_1894 1870217 - 1870612 + | ankyrin repeat protein CBUD_1895 1871582 - 1870662 - | aldose 1-epimerase family protein TERM 2138 1871391 - 1871379 - G 73 -2.6 -5.10163 | AACCGGAAAACAAAA CGGC CACCC GCCA GGCAGATCTGAGATT coaA 1872539 - 1871583 - | pantothenate kinase CBUD_1897 1872636 - 1872523 - | hypothetical protein TERM 2139 1872590 - 1872616 + g 71 -9.4 -3.01712 | opp_overlap 1872581, overlap 1872570 AATGGAGGACCGTAG CCCGTATGTAGC GAA GCGAAATACGGG TCTTGAGAAAGAAAG TERM 2140 1873104 - 1873122 + G 86 -3.1 -5.63103 | gap 1, overlap 1873106 ACCTTTACGAAAACT TC-CCCGT AAAA GCGGGTGA TTTTTTTGATTCAGA TERM 2141 1873175 - 1873189 + G 100 -8.5 -5.00616 | GATTTATTTAATGTC GCCGC AGGAC GCGGC TTTTTTAAAGCCCGA TERM 2142 1873317 - 1873329 + G 74 -6.3 -4.45517 | ATTTCTCAGCCACGC CTTTC CAT GAAAG TTTTCTCCATCGTTT TERM 2143 1873407 - 1873419 + G 82 -7.7 -4.43351 | GTACACGGGAAGGGC TCGCT AAC AGCGA TTATTTTTCGACTGT TERM 2144 1874165 - 1874180 + G 70 -6 -4.25848 | AGCTTCAATTCCATT GGCCCC GGGC GCGGCC TTTTCGTCGGAAGTT CBUD_1898 1872680 - 1874416 + | outer membrane protein CBUD_1899 1874413 - 1877202 + | hypothetical outer membrane protein TERM 2145 1877249 - 1877215 - T 85 -12.5 -3.25918 | gap 1, opp_overlap 1877226, overlap 1877218 1877226 TAATTTGGAAACAGA TCATAAAAAAACGCCT CGTG AGGCGTTTTTTTA-GA AGGTTTATGTATGGC TERM 2146 1877247 - 1877218 - T 95 -15.3 -2.80821 | opp_overlap 1877226, overlap 1877215 1877226 TTTGGAAACAGATCA TAAAAAAACGCCT CGTG AGGCGTTTTTTTA GAAGGTTTATGTATG TERM 2147 1877239 - 1877226 - T 100 -8.1 -5.69473 | opp_overlap 1877226, overlap 1877218 1877215 CAGATCATAAAAAAA CGCCT CGTG AGGCG TTTTTTTAGAAGGTT TERM 2148 1877226 - 1877239 + T 93 -8.1 -5.41746 | opp_overlap 1877218 1877215 1877226 CAGATCATAAAAAAA CGCCT CGTG AGGCG TTTTTTTAGAAGGTT CBUD_1900 1877484 - 1877272 - | hypothetical protein ampG 1878872 - 1877571 - | AmpG TERM 2149 1877693 - 1877680 - G 71 -9.5 -2.97177 | overlap 1877679 CGTAAAATCAATAAG GCGGG AAAA CCCGC AAAAAAAGTGATTAA TERM 2150 1877727 - 1877716 - G 80 -3.6 -5.33405 | GTGATTAAATAAAAA GGAG CCCA CCCC ATATGCTTGACGAGA TERM 2151 1877875 - 1877857 - G 72 -7.4 -4.00683 | AAAAAGGCAACGAAA GCGGCT GTTGATA AGCCGC CGCAAAAATAATCGG TERM 2152 1879671 - 1879660 - g 78 -4.4 -5.14563 | GCCGCGATGAAAAAA CCAT TTTT ATGG GATTAATGCACATTG sdaA 1879053 - 1880420 + | L-serine dehydratase CBUD_1903 1881659 - 1880448 - | hypothetical membrane associated protein TERM 2153 1880832 - 1880808 - G 95 -11.5 -3.81027 | opp_overlap 1880815 TGCAATGAATTCAAA CCAACGATGCT GAT AGCATTGTTGG AAATAATGGATCGTT CBUD_1904 1882720 - 1881716 - | prolipoprotein diacylglyceryl transferase TERM 2154 1884540 - 1884526 - H 76 -7.1 -4.17701 | overlap 1884505 TCTATAAATGATAAA CAGCC TGACT GGCTG GCAGAATATTTACCT TERM 2155 1884797 - 1884780 - H 71 -4.9 -4.5265 | AATCAGAGTATAAAA GCATTTT TTTA AAAACGC TAACAAAAAAACAAC TERM 2156 1885099 - 1885089 - H 74 -4 -5.14985 | opp_overlap 1885089 TTAAATATACAAAAA GTAA GGG TTAC CTTCTAAACGGCGGC TERM 2157 1885467 - 1885443 - g 82 -5.9 -5.00884 | ATTTTTTGTAAAAAA TATTAAGACTA AAA TATTCTTAATA AAGTGCGATGATCAC TERM 2158 1885718 - 1885700 - g 86 -11.8 -3.06711 | opp_overlap 1885697, overlap 1885702 TATCTATAAATGATA GACAACCA GCC TGGTTGTC AGAATATTTACCGGA TERM 2159 1886183 - 1886198 + G 71 -8.2 -3.46138 | TGAACAATTTAGCTA CCGCCG CCCC CGGTGG TTATGATAGTAATTT CBUD_1908 1885318 - 1886466 + | hypothetical membrane associated protein CBUD_1910 1888071 - 1887751 - | hypothetical protein TERM 2160 1888176 - 1888151 - R 100 -13.4 -5.67283 | opp_overlap 1888151 AATCTAAACAAAAAA CCCTGTCACT TTTTAC AGTGACAGGG TTTTTAATATAAAAC TERM 2161 1888151 - 1888176 + r 100 -13.4 -4.8048 | opp_overlap 1888151 AATCTAAACAAAAAA CCCTGTCACT TTTTAC AGTGACAGGG TTTTTAATATAAAAC CBUD_1913 1889806 - 1889333 - | homing endonuclease, 23S rRNA intron TERM 2162 1889692 - 1889712 + g 70 -2.5 -4.95854 | opp_overlap 1889693, overlap 1889693 ACGTGATGGAAAAAG ATGGTCTTG TTT CAATACCAA TTTTTAACTTTTTTC TERM 2163 1890973 - 1890991 + H 74 -8.9 -3.57798 | CTTAGACTTTCGGCG TGTGGGT TTTTC ACCCACA TTATCGTTACTTATG TERM 2164 1892203 - 1892215 + H 71 -6.2 -4.2354 | AGGTTCTATTTCACT CCCC TCGCC GGGG TTCTTTTCACCTTTC TERM 2165 1892847 - 1892816 - H 100 -15.4 -3.18383 | opp_overlap 1892820, overlap 1892820 AGTTTCACGCATCAA CAAACCTGTGTCAA GGAA TTAACACAGGTTTG TTGACGCCAGAAATC TERM 2166 1892843 - 1892820 - H 89 -10.4 -4.258 | opp_overlap 1892820, overlap 1892816 TCACGCATCAACAAA CCTGTGTCAA GGAA TTAACACAGG TTTGTTGACGCCAGA TERM 2167 1892820 - 1892843 + H 77 -8.2 -4.15044 | opp_overlap 1892820 1892816 TCACGCATCAACAAA CCTGTGTCAA GGAA TTAACACAGG TTTGTTGACGCCAGA CBUD_1913a 1895077 - 1895334 + | hypothetical protein TERM 2168 1895347 - 1895365 + T 79 -9.5 -3.68988 | opp_overlap 1895347 1895344 TAATGAAGTTAACCA CCCGGGC AGCAG GTCCGGG TTGTGTTAAATGACC tyrS 1896570 - 1895371 - | tyrosyl-tRNA synthetase TERM 2169 1896285 - 1896313 + g 80 -4.5 -5.21709 | overlap 1896287 TATTCTCCATCACGA TTTCACGCGTGAG TGG TTGGCGCGTGATA TTTTTTCCTGTCGGG TERM 2170 1896287 - 1896311 + g 73 -7.1 -4.23988 | overlap 1896285 TTCTCCATCACGATT TCACGCGTGAG TGG TTGGCGCGTGA TATTTTTTCCTGTCG TERM 2171 1897334 - 1897301 - g 79 -6.7 -4.66833 | gap 1, opp_overlap 1897304, overlap 1897302 1897304 CGTCAACGGGAAAAA GTATCGCGACGGCGAT ATC ATCGCCG-CGGAATTC AGCCATCGGGGCAAA CBUD_1920 1896594 - 1897952 + | peptidoglycan-specific endopeptidase, M23 family TERM 2172 1898937 - 1898949 + G 70 -5.5 -4.50159 | overlap 1898938 GGGATTCATCCCGAT TGGCT TGA AGCCG TTTGTTTCGCTTGGC anmK 1897956 - 1899074 + | hypothetical protein CBUD_1922 1899121 - 1899879 + | glycine betaine transport ATP-binding protein TERM 2173 1900499 - 1900486 - g 70 -8.1 -3.70902 | opp_overlap 1900487, overlap 1900487 TCGCTTATATTGAAA GTGCG TTGT CGCAC CGCCAACGGCAGTTA CBUD_1923 1899876 - 1901456 + | glycine betaine transport system permease protein degP.2 1902652 - 1901465 - | endopeptidase TERM 2174 1901847 - 1901836 - G 70 -5.8 -4.4009 | TTGGATTCCATAAAA TGGC ACTC GCCA AATCACCGTTTGTGT pkn2 1903457 - 1902717 - | serine/threonine protein kinase domain protein TERM 2175 1903151 - 1903164 + g 91 -3.9 -5.78622 | opp_overlap 1903151 CGAAGTCAGAGACCA GAAAA TCAA TTTTC TTTTTTTTGAGATAA CBUD_1926 1903594 - 1904043 + | hypothetical protein CBUD_1927 1904161 - 1904613 + | hypothetical membrane spanning protein CBUD_1928 1906239 - 1904992 - | hypothetical protein TERM 2176 1905855 - 1905830 - G 76 -2.7 -5.28281 | gap 1, overlap 1905832 1905836 1905839 ATAAAATAAACAAAA GA-CATACCATC GAC AATGATATGATC GATTGAAAATATCAG CBUD_1929 1906517 - 1906239 - | acyl carrier protein CBUD_1929a 1907292 - 1906663 - | enoyl-CoA hydratase CBUD_1931 1908521 - 1907283 - | hydroxymethylglutaryl-CoA synthase family protein TERM 2177 1907418 - 1907437 + g 71 -2.2 -5.15634 | opp_overlap 1907418, overlap 1907421 AACACCAAAAAACCA TTCTTGAT TAAT ATCAATAA TTTTTTCATAGGCTA CBUD_1932 1909763 - 1908528 - | 3-oxoacyl-[acyl-carrier-protein] synthase TERM 2178 1910206 - 1910194 - g 85 -4.1 -5.46629 | AAGAGGCGAAAAAAA TCTCC CCA GAAGA ACGCTTAATGTTGGA CBUD_1932a 1909836 - 1911611 + | modular polyketide synthase TERM 2179 1912620 - 1912609 - g 93 -4.4 -5.88565 | TTTACAACAAAAAAA GGTA AATT TACC TGAAATTATTTTTTT CBUD_1932b 1911608 - 1913053 + | thioesterase TERM 2180 1914010 - 1914033 + G 100 -9 -4.71828 | CGTTAATACTTTATT TTTCCCTTTT GAGA GAAAGGGAAA TTTTATTGATCAACT TERM 2181 1914843 - 1914818 - g 76 -2.7 -5.30155 | opp_overlap 1914821 GTATTAACTAAAAAA TCATTACTAAA AAAA TTTAGAAATAA TATTTATTTACTCGC TERM 2182 1915210 - 1915195 - g 82 -3.4 -5.45652 | opp_overlap 1915195 ATTTCTAACAAAAAA TAAAAT TTCT ATTTTA TGGTTAACTAAAACA CBUD_1934 1913144 - 1916986 + | non-ribosomal peptide synthetase module-containing protein TERM 2183 1917299 - 1917254 - T 70 -8.3 -3.27923 | gap 1, overlap 1917258 CTTCAATACCAGCAA TTCAGTAGGTTGGGTTGGGCTT CGC AAGCTCAGCCCAACCTAC-GCG CTATCCCAAGCTGAT TERM 2184 1917296 - 1917258 - T 100 -19 -2.58539 | overlap 1917254 AATACCAGCAATTCA GTAGGTTGGGTTGGGCTT CGC AAGCTCAGCCCAACCTAC GCGCTATCCCAAGCT CBUD_1935 1918371 - 1917361 - | hypothetical protein TERM 2185 1917987 - 1917963 - G 75 -5.7 -4.70534 | CAAATATATATAAAA TGCAGTTCCTC AGA GAGGAATTCCA AATAATTTTCATAAA TERM 2186 1918211 - 1918199 - G 76 -2.7 -5.34655 | TAATTAAAAATAAAA TCGAT TAC ATCAA AATGCCCATTTGCAG CBUD_1936 1919171 - 1918620 - | hypothetical protein CBUD_1937 1920607 - 1919651 - | alcohol dehydrogenase [NADP+] TERM 2187 1919722 - 1919701 - G 73 -5.1 -4.62069 | gap 1 CTTTTATTGTAAAAA TGCTGCCATC AAT GA-GGCGGCA ACCTGAGTTTAGTGC CBUD_1939 1920810 - 1920682 - | hypothetical protein TERM 2188 1921331 - 1921343 + G 82 -7.7 -4.57341 | CCCAACTGACCCCGC TGCTC GTA GAGCA TTTTTAAGAGCACTT CBUD_1940 1920876 - 1922051 + | hypothetical protein TERM 2189 1922642 - 1922630 - g 70 -7.7 -3.6692 | overlap 1922628 CGTGAGCGGAAAATA CACGA AGA TCGTG ATGAAAAGTTCGTAA CBUD_1941 1922033 - 1922680 + | hypothetical protein TERM 2190 1922731 - 1922720 - g 78 -2.2 -5.4756 | AAGCCCAACAAAAAA TGCA ATAT CGCA GAGGCTTACTCAAGC CBUD_1941a 1922700 - 1922879 + | hypothetical protein TERM 2191 1923412 - 1923424 + G 75 -9.1 -3.58905 | TGGATTTTGTGGTGG CGGTG GAA CACCG TTGTATATGGGGAAT cas1_2 1923149 - 1924117 + | hypothetical cytosolic protein TERM 2192 1926528 - 1926504 - f 73 -10.1 -2.8241 | overlap 1926503 ACCACAGCCAACAAG TCTTGCTGATG CGT CATAAGCAAGA GCAGCACCTTGATGA TERM 2193 1926878 - 1926860 - f 74 -4.6 -4.88067 | AGCCATCGAGAAAAA GCCATT GTATTTA AATGGC CAGGGTTTGAAGACA TERM 2194 1928101 - 1928085 - g 80 -6.5 -4.78572 | opp_overlap 1928085, overlap 1928080 TTCGAATTAAGAAAA CGCATCG ACA CGATCCG TTTTTCCGATGAAGC TERM 2195 1928085 - 1928101 + G 77 -6.5 -4.62069 | opp_overlap 1928085 1928080 TTCGAATTAAGAAAA CGCATCG ACA CGATCCG TTTTTCCGATGAAGC TERM 2196 1928416 - 1928402 - g 74 -4.2 -4.98255 | opp_overlap 1928413, overlap 1928403 1928405 TCTTAATCACAAAAA CGATTG GAA CATTCG TCATGAGCGAGACGA csy1_2 1927473 - 1928735 + | hypothetical cytosolic protein csy2_2 1928732 - 1929694 + | hypothetical protein csy3_2 1929678 - 1930787 + | hypothetical cytosolic protein csy4_2 1930796 - 1931353 + | hypothetical cytosolic protein CBUD_1947a 1931350 - 1931451 + | hypothetical protein CBUD_1948 1931594 - 1931755 + | phage integrase family protein pilA 1932003 - 1932425 + | type 4 major prepilin protein TERM 2197 1932582 - 1932571 - g 70 -5.8 -4.25873 | TCCTCAGAAAAAATA GCAG AAGC CTGC GCCACTTACTTTGGT TERM 2198 1932720 - 1932732 + G 72 -7.7 -3.75051 | overlap 1932717 ACCTACGCTAGCTAT TAGCG ATC CGCTA TATTTTCCCTTAATC pilB 1932415 - 1933968 + | type 4 pili biogenesis protein (nuleotide-binding protein) TERM 2199 1934380 - 1934394 + G 70 -2.8 -4.94992 | GGAGTTCGTCATCCC GCAATT CCA AAATGC TTTTTCTGAATTTGG TERM 2200 1934591 - 1934577 - g 78 -4.3 -5.14163 | ACGCATTAATAAAAA TTCCA CTCAT TGGAA AGGGTATTCAAAATA TERM 2201 1934911 - 1934889 - g 72 -6.2 -4.2704 | overlap 1934891 TTTATCAGGAAGAAA TAGACGAGCG TTA CGATCGTCTC AGCGAGTGCCTGGAA TERM 2202 1934909 - 1934891 - g 75 -8.8 -3.73445 | overlap 1934889 TATCAGGAAGAAATA GACGAGCG TTA CGATCGTC TCAGCGAGTGCCTGG pilC 1933961 - 1935016 + | type 4 pili biogenesis protein (plasma membrane protein) TERM 2203 1935316 - 1935332 + G 76 -10.1 -3.27475 | overlap 1935315 TAAGCTACTTAACCT TGCGCGG TCG CTGCGCA TATTGTCATGAAAAA TERM 2204 1935843 - 1935855 + G 86 -9.1 -4.4009 | overlap 1935845 TTTATTGCTGTAGCG GGCTG GAT CAGCC TTTTGTCGGGTCCGG pilD 1935042 - 1935902 + | type 4 prepilin peptidase TERM 2205 1936269 - 1936291 + G 77 -10.6 -3.17527 | overlap 1936267 1936270 TGCCGAGGCCTCGCA GTCGGTCGAT TTT ATCGACCGAA TCTTGGTGGTGGATG TERM 2206 1936270 - 1936290 + G 93 -14.1 -2.50195 | overlap 1936269 1936267 GCCGAGGCCTCGCAG TCGGTCGAT TTT ATCGACCGA ATCTTGGTGGTGGAT coaE 1935913 - 1936512 + | dephospho-CoA kinase TERM 2207 1936748 - 1936734 - g 70 -2.8 -4.98531 | overlap 1936728 TGGTTAAATGAAAAA GGGAAA CCT TTTGCC GCCAGGGGTGAATTT TERM 2208 1936957 - 1936980 + G 71 -6.8 -4.2349 | gap 1, overlap 1936952 1936958 TACCCGTGGCCTATT C-TCCAAAGGG TAG CCTTTTGGATG TTTTAGATATAGCGA TERM 2209 1936958 - 1936978 + G 82 -10.5 -3.71913 | overlap 1936952 1936957 ACCCGTGGCCTATTC TCCAAAGGG TAG CCTTTTGGA TGTTTTAGATATAGC queF 1936533 - 1937369 + | queuosine biosynthesis protein CBUD_1956 1937394 - 1938206 + | hypothetical protein TERM 2210 1938435 - 1938473 + T 86 -11.8 -3.28416 | opp_overlap 1938437, overlap 1938436 1938449 GGGAATCTAGGCTAA AAGGCTAAGAAAAGCGCC ATC GGTGTTTTTCTTAGCCCC TTAATCTGGGTCCTC TERM 2211 1938436 - 1938472 + T 95 -15.3 -2.56728 | opp_overlap 1938437, overlap 1938435 1938449 GGAATCTAGGCTAAA AGGCTAAGAAAAGCGCC ATC GGTGTTTTTCTTAGCCC CTTAATCTGGGTCCT TERM 2212 1938471 - 1938437 - T 100 -14.4 -4.15453 | opp_overlap 1938436 1938435 1938449 GAATCTAGGCTAAAA GGCTAAGAAAAGCGCC ATC GGTGTTTTTCTTAGCC CCTTAATCTGGGTCC TERM 2213 1938449 - 1938459 + T 76 -4.6 -5.06816 | opp_overlap 1938437, overlap 1938436 1938435 AAAGGCTAAGAAAAG CGCC ATC GGTG TTTTTCTTAGCCCCT CBUD_1956a 1938577 - 1938431 - | hypothetical cytosolic protein TERM 2214 1938485 - 1938505 + g 82 -6.7 -4.79752 | CCCCTTAATCTGGGT CCTCCCGAC TCG GCCGTGAGG TTTTGTATTCTTCAA TERM 2215 1938528 - 1938555 + g 76 -6.8 -4.4874 | opp_overlap 1938528 1938526 1938533 TTCTTCAACAATACA CCAGACGGCCTC GCGG GAGGACGACGGG TTTTAAGTTTTTCAC mutT 1938987 - 1938574 - | 7,8-dihydro-8-oxoguanine-triphosphatase secA 1941716 - 1938966 - | protein translocase subunit TERM 2216 1940233 - 1940244 + gH 71 -2.2 -5.15969 | GCAATAATTTTGGCT TCGC GTTC GTGA TTTTTTGCATTGAGA TERM 2217 1940690 - 1940703 + gH 74 -3.9 -5.07567 | opp_overlap 1940690 TGTGTTCATCTACAA TAATG ACTT CATTA TTTTTTACAATGTAA TERM 2218 1940751 - 1940738 - GH 78 -3.7 -5.24129 | overlap 1940740 CGTCTCGATAAAAAA GCGTG TGTG CGCGC AAAGCGGCATAAACA TERM 2219 1941470 - 1941487 + gH 89 -11.3 -3.53012 | opp_overlap 1941468 1941463 CGAAATGACGAAGGC CGAGCGT GCGA ACGCTCG TTTCCCGAACCACCG CBUD_1959 1941716 - 1942060 + | hypothetical protein TERM 2220 1942399 - 1942364 - fH 81 -5.4 -5.03715 | opp_overlap 1942363 ATTACCCCCAAAAAA CCTATTGGGTCCATAA TTCA CTGTGGACGCAAGAGG ATTCGCTCCCGCCTT TERM 2221 1943498 - 1943477 - fH 78 -7.3 -4.34557 | opp_overlap 1943476, overlap 1943479 AACTTAAAAAGGAAA GGGTCATGT TTTT ACATGACAC AAGTTTTTCTGATGA TERM 2222 1943625 - 1943607 - g 74 -10.2 -2.66316 | opp_overlap 1943593 1943592, overlap 1943604 CCGCGCAGGAGACCA GGCGCGCT TTT AGCGCGCT GCGCACGGTGTGCGC CBUD_1962 1943586 - 1943699 + | hypothetical protein TERM 2223 1944725 - 1944715 - g 71 -6.8 -4.22214 | overlap 1944712 ATCCATTTAAAAGAA GTCG CTT CGAC ATTCAACCCTCCATA CBUD_1963 1943853 - 1944818 + | hypothetical protein CBUD_1964 1945127 - 1944990 - | hypothetical protein TERM 2224 1945075 - 1945057 - G 74 -10.2 -2.60079 | overlap 1945053 1945068 GCAGGCGAGAATCCA GGCGCACC GAA GGTGCGCT GCGCACGTGTGCGCT TERM 2225 1945311 - 1945277 - R 100 -14.4 -4.08692 | opp_overlap 1945274 1945289 GAATCCCGGCTAAAA GGCTAAGAAAAGCGCC ATC GGTGTTTTTCTTAGCC CCCTAATCTGGGTCT TERM 2226 1945289 - 1945299 + r 76 -4.6 -5.06414 | opp_overlap 1945277, overlap 1945274 AAAGGCTAAGAAAAG CGCC ATC GGTG TTTTTCTTAGCCCCC lpxC 1946338 - 1945427 - | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase ftsZ 1947679 - 1946498 - | cell division protein TERM 2227 1946914 - 1946954 + g 83 -9 -4.10161 | gap 1, opp_overlap 1946916, overlap 1946916 CCACGTCTTCCAACA GAGGGCTTGCGATAGCGGC TTCC GCGGCT-TCGCGAGCTCTG TTTTCGCCGCTGCTA TERM 2228 1946916 - 1946952 + g 90 -11.6 -3.64716 | gap 1, opp_overlap 1946916, overlap 1946914 ACGTCTTCCAACAGA GGGCTTGCGATAGCGGC TTCC GCGGCT-TCGCGAGCTC TGTTTTCGCCGCTGC ftsA 1948921 - 1947680 - | cell division protein CBUD_1969 1949103 - 1949723 + | carbonic anhydrase ftsQ 1950451 - 1949720 - | cell division protein TERM 2229 1949929 - 1949919 - G 77 -8.2 -4.05446 | TTTGTTAATGATAAA GCCG TGA CGGC GGCATGAAAGGGGAT murB 1951401 - 1950451 - | UDP-N-acetylenolpyruvoylglucosamine reductase TERM 2230 1951289 - 1951311 + g 77 -8.4 -4.07568 | AAATCGAATAAATCG GCCGGACGAT AAA ATCGTTCTGC TTTTCCACCCACGCG murC 1952791 - 1951394 - | UDP-N-acetylmuramate--alanine ligase murG 1953854 - 1952778 - | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase TERM 2231 1953032 - 1953052 + g 71 -8.2 -3.53444 | opp_overlap 1953031 1953029 1953032 AAGGGATAAAAATAC TCGCCACG CCGAC CGAGGCGA TTTCGCAAACAGTCA TERM 2232 1953802 - 1953783 - G 71 -9.2 -3.05384 | CTCCTGTTCACGCAA CTCTCGCG CCAC CGCGAGCG CCGGAAAAATATGGC TERM 2233 1953812 - 1953837 + g 71 -9.7 -2.63236 | opp_overlap 1953812, overlap 1953811 1953819 CGAGCGCCGGAAAAA TATGGCCGCCG GTGC CGCCGGCTATA ATTAATATTCGATTC TERM 2234 1953837 - 1953812 - G 78 -7.5 -4.57569 | opp_overlap 1953812 1953811 1953819 CGAGCGCCGGAAAAA TATGGCCGCCG GTGC CGCCGGCTATA ATTAATATTCGATTC TERM 2235 1953819 - 1953833 + g 71 -9.2 -2.96979 | opp_overlap 1953812, overlap 1953812 1953811 CGGAAAAATATGGCC GCCGGT GCC GCCGGC TATAATTAATATTCG CBUD_1973 1955403 - 1953904 - | hypothetical protein ftsW 1956573 - 1955455 - | cell division protein murD 1957901 - 1956573 - | UDP-N-acetylmuramoylalanine--D-glutamate ligase TERM 2236 1957026 - 1957012 - G 71 -5 -4.64766 | CGGATACCGGAAAAA TCACGT AAT ACATGA AGCATATTTTCTATG TERM 2237 1957532 - 1957549 + g 76 -7.7 -4.19238 | TCATCATTAATCCCA CTACCGT CGTC ACGGTGG TTTTGCCATTGGAGC CBUD_1979 1959755 - 1959636 - | hypothetical protein TERM 2238 1959724 - 1959745 + g 75 -5.8 -4.7416 | opp_overlap 1959708 1959709 TCTCGGCCGCAAGCG TCTCGGCC ATAAGC GACCGAGA TTTTTCCCATTTTGA TERM 2239 1959845 - 1959866 + r 100 -14.5 -4.7923 | GCCCCATCGCTCTTG TCTCTGGCG CAAG CGCCAGAGA TTTATTTCTTTAAAT TERM 2240 1959869 - 1959882 + r 70 -2.5 -5.00884 | CAAGCGCCAGAGATT TATTT CTTT AAATA TTTTTTAACGCGCCT mraY 1961012 - 1959927 - | phospho-N-acetylmuramoyl-pentapeptide-transferase TERM 2241 1960552 - 1960532 - G 80 -8.9 -4.0749 | TCAAAAAAGGAATAA CCAGTGCCG TCT CTGCACCGG TCGTGGCAGAGAAAT TERM 2242 1961036 - 1961051 + r 72 -9 -3.40403 | opp_overlap 1961033 TCCTCTAATAACGCG TGGGCA ATGT TGCCCA TTCTCATGGAAAGCG murF 1962357 - 1961017 - | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase TERM 2243 1961106 - 1961124 + g 75 -3.2 -5.2204 | overlap 1961109 TGGCATTGAGATCGT TTTTTAAC GCA GTTAATAA TTTTTCTTGATTATC murE 1963823 - 1962354 - | UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase CBUD_1984 1964152 - 1963874 - | hypothetical membrane associated protein CBUD_1985 1964164 - 1964295 + | hypothetical protein CBUD_1988 1964424 - 1965800 + | hypothetical protein ftsI 1967463 - 1965805 - | cell division protein TERM 2244 1966636 - 1966660 + g 70 -7.8 -3.6968 | gap 1, opp_overlap 1966636 CGCTCGGTTACGATA CCGTCCG-TCG TGAT CGGTCGGGCGG TTATTCGGGTTGTAA TERM 2245 1966876 - 1966851 - G 73 -9.7 -3.01924 | overlap 1966866 CAGGTTTTTGCAACA CGGCCACATCA GCAA TCACGTGGCCG AGACGATCCTTTAAC ftsL 1967803 - 1967456 - | cell division protein TERM 2246 1967824 - 1967848 + r 90 -3.3 -6.02546 | opp_overlap 1967831, overlap 1967825 1967826 TTTCTCCACGATGCG TAAGCGAGCGC TAC GCGCCCGCGGG TTTTTTTTAATTTCG mraW 1968723 - 1967800 - | S-adenosyl-methyltransferase TERM 2247 1967936 - 1967958 + g 76 -7 -4.44608 | GCCAAAATCGGGATC TCACGCGG CAAATGA TCGCGTGA TTCTTTTTGGATAAA mraZ 1969211 - 1968729 - | cell division protein TERM 2248 1969110 - 1969148 + g 100 -12.4 -3.60627 | GTCCGCTTCGCTTTC GATCGGTTCGCGATACCG CGC CGGTATGGCGATTCGACC TTTGGCATCAACTGC TERM 2249 1969342 - 1969369 + r 100 -16.4 -3.14463 | gap 1, overlap 1969346 CCTAGCCTACACTTT CAACCCTCTCCCC TGT GGGGAG-GGGTTG TTAATCACGAAAGTT TERM 2250 1969346 - 1969366 + r 100 -14.7 -3.71848 | overlap 1969342 GCCTACACTTTCAAC CCTCTCCCC TGT GGGGAGGGG TTGTTAATCACGAAA yajQ 1969852 - 1969370 - | protein YajQ CBUD_1994 1970005 - 1970217 + | hypothetical protein tdh 1971299 - 1970253 - | threonine 3-dehydrogenase TERM 2251 1970516 - 1970502 - G 71 -4.9 -4.70659 | opp_overlap 1970502 TGGGATACCCAAAAA GGCGA TTTTC CCGCC GTTATTCATTACCGT TERM 2252 1971166 - 1971178 + g 100 -6.2 -5.79588 | overlap 1971165 ATATGCAAATCCGTG CCGC AAATG GCGG TTTTTTTAATTTTAA TERM 2253 1971247 - 1971257 + g 76 -6.8 -4.54727 | TTGTGGAGCCAGAGG CCAG GGG CTGG TTTTAGTTTGGAAAG kbl 1972512 - 1971322 - | 2-amino-3-ketobutyrate coenzyme A ligase TERM 2254 1971985 - 1971972 - G 71 -2.3 -5.09895 | opp_overlap 1971972 CATCCATCGAAAAAA CGCCA TCCG TTGCG ATTAATTTAAATCGA TERM 2255 1972041 - 1972051 + g 87 -8.2 -4.52873 | opp_overlap 1972040 1972041, overlap 1972038 ATTTCGCTTCCAAAT CGCC CAT GGCG TTATTTTTATAGCGA CBUD_1998 1972917 - 1973402 + | hypothetical protein metQ 1974216 - 1973413 - | methionine-binding protein TERM 2256 1973913 - 1973882 - G 76 -8 -4.1891 | opp_overlap 1973902, overlap 1973883 TTTTTGGAATATAAA CCCATCGGGTAAAC AAAT GTTTTTCCGATGGA AACGATTTTATAACC TERM 2257 1973912 - 1973883 - G 72 -9.3 -3.11024 | opp_overlap 1973902, overlap 1973882 TTTTGGAATATAAAC CCATCGGGTAAAC AAAT GTTTTTCCGATGG AAACGATTTTATAAC metI 1974885 - 1974229 - | methionine transport system permease protein metN 1975909 - 1974854 - | methionine transport ATP-binding protein TERM 2258 1976181 - 1976144 - g 100 -17.8 -4.13014 | gap 1, overlap 1976147 TTGAGACTTTTAAAA GCA-GGTCGTCCCGCGG TCGAG CCGCGGGACGACGATGC CAACATTAGAATTGC TERM 2259 1976177 - 1976147 - g 100 -18.3 -3.09272 | overlap 1976144 AGACTTTTAAAAGCA GGTCGTCCCGCGG TCGAG CCGCGGGACGACG ATGCCAACATTAGAA CBUD_2001a 1976123 - 1976218 + | hypothetical protein CBUD_2001b 1976325 - 1976215 - | hypothetical protein TERM 2260 1977101 - 1977118 + G 74 -4.9 -4.89339 | opp_overlap 1977101 GGATTACTTTAACCA TAATGGC AATT GCTATTA TTTTTCTCAATGCTT TERM 2261 1977174 - 1977193 + G 78 -2.2 -5.56568 | ATTATACCCGGTGGC CATTCA ACAAACCG TGAATG TTTTTTTCCTGATAT TERM 2262 1977901 - 1977921 + G 72 -9.8 -2.78679 | overlap 1977900 CAATTGCGTATATGC CGCGTTAT CTACC ATAACGCG ATTTACATCGGCAAA CBUD_2002 1976398 - 1978026 + | hypothetical protein TERM 2263 1978795 - 1978780 - g 77 -6.1 -4.58395 | overlap 1978769 TCGAGGTTTTAAAAA CCGGA CTCCAT TCCGG AACAGGGAGCGGCGT TERM 2264 1978800 - 1978821 + G 91 -3.6 -5.79588 | CTCCATTCCGGAACA GGGAGCGG CGTAAT CCCTTCCC TTTTTTTGATTTTAC TERM 2265 1978946 - 1978959 + G 91 -8.1 -4.89521 | TAAAAAAACGGCTGA CGCTC TGGG GAGCG TTTTCTTTGAAATGT CBUD_2003 1978104 - 1979546 + | peptidase, M20A family CBUD_2004 1979581 - 1979694 + | hypothetical protein TERM 2266 1980380 - 1980392 + G 86 -9.1 -4.26188 | ACACGGTTCTCGCCA CTGGC GGC GCCAG TTTTGCCTATCTCCA nadB 1979815 - 1981425 + | L-aspartate oxidase CBUD_2005 1981780 - 1981379 - | hypothetical protein sixA 1982261 - 1981782 - | phosphohistidine phosphatase SixA homolog TERM 2267 1982180 - 1982195 + g 71 -9 -3.36991 | TAATTTCTTCTATCC CCTCTG CACT CAGAGG TCTTTCACGCTGATC CBUD_2007a 1982458 - 1982252 - | hypothetical protein TERM 2268 1982328 - 1982358 + g 75 -9 -3.60475 | AATCCCGACTTTATC TTCCAGGGAAGGGA AAT TACCATCCTTGGAA TTTGGAGTCCCGCTT CBUD_2007b 1982774 - 1982929 + | hypothetical protein nadC 1983750 - 1982926 - | nicotinate-nucleotide pyrophosphorylase [carboxylating] pssA 1984505 - 1983750 - | CDP-diacylglycerol--serine O-phosphatidyltransferase CBUD_2012 1984575 - 1984967 + | acetyltransferase CBUD_2014 1984967 - 1986142 + | cardiolipin synthetase CBUD_2013 1987094 - 1986126 - | sodium-calcium exchanger clpB 1989670 - 1987091 - | ClpB TERM 2269 1989891 - 1989906 + r 72 -3.2 -5.05079 | overlap 1989892 TGGGCTTTGCGTTTT TTAGCC CTTG GGCTAC TTTTTATATCATTAT queE 1990624 - 1989983 - | queuosine biosynthesis protein TERM 2270 1990066 - 1990078 + g 74 -7.7 -3.93236 | CTTCGACGATCCAGT CAGCA AGC TGCTG TTTATCCAGTTGCTC TERM 2271 1990546 - 1990575 + g 70 -7.9 -3.66178 | opp_overlap 1990546 1990552, overlap 1990550 1990552 ATCCTGTTAAGCGAA CAAAAACAGTAGG AAGC CCTACCGTCTTTG TTTCGCCTTGCAAGG TERM 2272 1990575 - 1990546 - G 93 -12.3 -3.17194 | opp_overlap 1990546 1990550 1990552, overlap 1990552 ATCCTGTTAAGCGAA CAAAAACAGTAGG AAGC CCTACCGTCTTTG TTTCGCCTTGCAAGG TERM 2273 1990569 - 1990552 - G 95 -7.7 -5.13741 | opp_overlap 1990550 1990546 1990552, overlap 1990546 TTAAGCGAACAAAAA CAGTAGG AAGC CCTACCG TCTTTGTTTCGCCTT ygbF 1991544 - 1990627 - | tol system periplasmic component CBUD_2018 1992118 - 1991531 - | peptidoglycan-associated lipoprotein TERM 2274 1991643 - 1991653 + g 77 -8.2 -3.94877 | overlap 1991638 ATATCAATTTGCTTC GGCG CGA CGCC TTCTTGTTCCAAGAT TERM 2275 1991970 - 1992007 + g 71 -8.3 -3.55444 | opp_overlap 1991979, overlap 1991972 1991975 GCGCCTGTGCCATCG CTTAATCCAGTCGCCGC ATTT GCGCCGGCTGGATGGTG TTTACAACCTGACAG TERM 2276 1991972 - 1992005 + g 74 -9.5 -3.35597 | opp_overlap 1991979, overlap 1991970 1991975 GCCTGTGCCATCGCT TAATCCAGTCGCCGC ATTT GCGCCGGCTGGATGG TGTTTACAACCTGAC TERM 2277 1991975 - 1992002 + g 93 -13.4 -2.84504 | opp_overlap 1991979, overlap 1991972 1991970 TGTGCCATCGCTTAA TCCAGTCGCCGC ATTT GCGCCGGCTGGA TGGTGTTTACAACCT tolB 1993450 - 1992128 - | TolB CBUD_2019a 1994030 - 1993689 - | hypothetical protein CBUD_2019b 1994247 - 1994152 - | hypothetical protein TERM 2278 1994206 - 1994184 - G 93 -9.8 -4.26305 | AAAAGCCAACATAAA GCATCTCCCA TTT CGGGTGATGC AGTGCCACCGCATAC tolA 1995076 - 1994261 - | TolA TERM 2279 1994837 - 1994861 + g 70 -2.7 -5.01823 | overlap 1994838 1994848 TCGTTTCTGTTCTTG ACGACGGGCTT CCA AAGCCGCTCGC TTTTGTTCTTGTTCT CBUD_2021 1997188 - 1995245 - | phosphoglycerol transferase MdoB-like protein, alkaline phosphatase superfamily TERM 2280 1997128 - 1997108 - G 100 -7.5 -5.95166 | GTTAATTAAAAAAAA CCATCCCGC CCA GCGGTATAG CGCACGACGTGATTT CBUD_2022 1997961 - 1997203 - | putative lactonase TERM 2281 1997664 - 1997677 + g 70 -3.7 -4.88388 | opp_overlap 1997659, overlap 1997665 TAAGATTGAATCGCA CGGCG CGCA CGCCC TTTTTGTGCAATTCT TERM 2282 1997907 - 1997887 - G 74 -6.9 -4.39877 | overlap 1997883 1997888 TGAAGAAGGAACAAA TCCTTGATT AGG AATCAAGGG AAAACGAGGATCAAT TERM 2283 1997906 - 1997888 - G 77 -10.4 -3.22841 | overlap 1997883 1997887 GAAGAAGGAACAAAT CCTTGATT AGG AATCAAGG GAAAACGAGGATCAA ecnB 1998127 - 1997972 - | entericidin A precursor CBUD_2024 2000297 - 1998381 - | phosphoglycerol transferase MdoB-like protein, alkaline phosphatase superfamily TERM 2284 1999997 - 1999982 - G 100 -6.8 -5.65513 | gap 1, overlap 1999983 1999984 CAGCAATTAAAAAAA GC-GCCG CGG CGGCAGC CATTAATACACCTGC TERM 2285 2000536 - 2000518 - H 79 -6.6 -4.62984 | overlap 2000519 TCAGGATAGACAAAA TGGCGCTG TTA CAACGCCC CACCCCGATGATCAA TERM 2286 2000535 - 2000519 - H 77 -10.1 -3.37067 | overlap 2000518 CAGGATAGACAAAAT GGCGCTG TTA CAACGCC CCACCCCGATGATCA TERM 2287 2000640 - 2000669 + G 86 -11.5 -3.25823 | opp_overlap 2000640 2000644, overlap 2000644 CGCCTCAGTATGAAA GAAATCTCGGCCG TTGA TGTCCGAGATTTC TTCATCTAAACACAG TERM 2288 2000669 - 2000640 - g 88 -10.8 -3.78775 | opp_overlap 2000640 2000644, overlap 2000644 CGCCTCAGTATGAAA GAAATCTCGGCC GTTGAT GTCCGAGATTTC TTCATCTAAACACAG TERM 2289 2000665 - 2000644 - g 73 -5.8 -4.51743 | opp_overlap 2000640 2000644, overlap 2000640 TCAGTATGAAAGAAA TCTCGGCC GTTGAT GTCCGAGA TTTCTTCATCTAAAC TERM 2290 2000644 - 2000665 + G 72 -6.5 -4.29106 | opp_overlap 2000644 2000640, overlap 2000640 TCAGTATGAAAGAAA TCTCGGCCG TTGA TGTCCGAGA TTTCTTCATCTAAAC CBUD_2026a 2000544 - 2000678 + | hypothetical protein proS 2002371 - 2000671 - | prolyl-tRNA synthetase TERM 2291 2001375 - 2001356 - G 74 -9.2 -3.33419 | opp_overlap 2001373, overlap 2001354 ATCGGCAAATTAACA GGCCCCAA GGAA CCGGGGCC ACAGCCAATGGCTTC TERM 2292 2001644 - 2001660 + g 70 -3.6 -4.74706 | overlap 2001636 2001635 2001646 ACTCGCTCGCCTTGA GGCGCT TGTGC AGCGGC TTTTTCAATGTTAGC TERM 2293 2003509 - 2003463 - R 83 -10.9 -3.67792 | gap 1, opp_overlap 2003464 2003465 2003471 TCACAGCCATTTAAA CTTTAGACTTCGTCATCCCCGC GCAG GCGGGGATGACGG-GCTTTAAG TTTTTTTAGTCTTTA TERM 2294 2003464 - 2003509 + r 100 -16.3 -5.66989 | opp_overlap 2003463, overlap 2003465 2003471 CACAGCCATTTAAAC TTTAGACTTCGTCATCCCCGC GCAG GCGGGGATGACGGGCTTTAAG TTTTTTTAGTCTTTA TERM 2295 2003465 - 2003508 + r 100 -17.6 -3.97753 | opp_overlap 2003463, overlap 2003464 2003471 ACAGCCATTTAAACT TTAGACTTCGTCATCCCCGC GCAG GCGGGGATGACGGGCTTTAA GTTTTTTTAGTCTTT TERM 2296 2003471 - 2003502 + r 100 -18.8 -3.0485 | opp_overlap 2003463, overlap 2003465 2003464 ATTTAAACTTTAGAC TTCGTCATCCCCGC GCAG GCGGGGATGACGGG CTTTAAGTTTTTTTA CBUD_2029 2004344 - 2003553 - | hypothetical membrane spanning protein CBUD_2030 2005697 - 2004459 - | monooxygenase TERM 2297 2004641 - 2004629 - G 71 -4.7 -4.59511 | overlap 2004619 AACATTCTTTAAAAA GACGC ATG GCGGC TAGCATTATTGTATT ubiH 2006916 - 2005684 - | 2-polyprenyl-6-methoxyphenol hydroxylase TERM 2298 2005751 - 2005764 + gH 78 -5.3 -5.00616 | opp_overlap 2005763 GAAAGACCCATCAGG CGTTT GGCT AAACG TTTTTTAAACGGGGG TERM 2299 2007061 - 2007094 + GH 74 -6.5 -4.3902 | overlap 2007064 GCGCTGCGCACATGT GCGCTGGATCCCCGC CTGC GCGGGGATGACGGGC TTTAGTTTTTCTAAT CBUD_2032 2006915 - 2007136 + | hypothetical protein TERM 2300 2007560 - 2007544 - g 70 -5.1 -4.5123 | AACTCAGCAAAGAAA CGGCA TTGTTTT TGCCG TTGACCCCCGGTTAA CBUD_2033 2007194 - 2009017 + | Xaa-Pro aminopeptidase TERM 2301 2009092 - 2009044 - T 100 -14.8 -3.1505 | opp_overlap 2009034, overlap 2009049 AGTAGCCCGTATGAA GCGAAGCGAAATACGGGA TTTGTTTTTATTT CCCCGTATTCCGCTTCGC TCATACAGCTACTTT CBUD_2034 2010513 - 2009107 - | ankyrin repeat protein TERM 2302 2009993 - 2010018 + g 77 -8.2 -4.05816 | overlap 2009991 TTGCTATACTTCTTG CCCACGGCGT GGTTAA GCGCCGTGAG TTTCTGATCATTTTG TERM 2303 2010313 - 2010325 + g 76 -7.7 -4.08064 | CAACTGCAATGGGCC CTCTC TAA GAGAG TTTTGAACAGGAATT CBUD_2035 2012543 - 2010501 - | ankyrin repeat protein TERM 2304 2011698 - 2011711 + g 70 -3.7 -4.85599 | GAAGGTTGAACTCTG CGCAC GATG GAGCG TTTTTCTAACGTCAA TERM 2305 2012439 - 2012472 + g 74 -4.8 -4.82667 | overlap 2012440 CAGGCTTGGTCCTGA TGATGAAGAAAA CGAAAGTGAT TTTTCTTCATCG TTTTTACTCTCGTCC TERM 2306 2012727 - 2012681 - g 100 -16.8 -3.14931 | opp_overlap 2012671 2012681, overlap 2012686 CGTAGCCCGTATGAA GCGAAGCGAAATACGGGA TTTGTTTATTT CCCCGTATTCCGCTTCGC TTCATATGGGCTACC TERM 2307 2012681 - 2012727 + G 100 -13.9 -3.27022 | opp_overlap 2012681 2012686, overlap 2012671 CGTAGCCCGTATGAA GCGAAGCGAAATACGGG ATTTGTTTATTTC CCCGTATTCCGCTTCGC TTCATATGGGCTACC TERM 2308 2012777 - 2012756 - g 82 -5 -5.27335 | opp_overlap 2012766, overlap 2012758 CCTTCTAAACAAAAA CGCCCGCC ATTCGG GGCCAGCG GCTCGATCCTTTAAA CBUD_2036 2012676 - 2012843 + | hypothetical protein CBUD_2037 2012931 - 2013170 + | hypothetical protein CBUD_2038 2013167 - 2013490 + | hypothetical protein TERM 2309 2013740 - 2013723 - g 85 -5.6 -5.14965 | ATGCTTAGCAAAAAA CAACTG CGCGAC CAGTTG CGTCAGCGTCGAAAC TERM 2310 2014111 - 2014150 + G 100 -12.1 -5.03145 | opp_overlap 2014101 ATAAAGACGGTAATC GCCTGGGTCGCGG-CGCAG GCTA CTACGACCGCG-CCCTGGC TTTTTTAAAAGATTC CBUD_2040 2013699 - 2014292 + | 5-formyltetrahydrofolate cyclo-ligase CBUD_2039 2014633 - 2014289 - | hypothetical protein CBUD_2041 2015058 - 2014684 - | rhodanese-related sulfurtransferase parE 2017172 - 2015247 - | topoisomerase IV subunit B TERM 2311 2015291 - 2015309 + g 100 -8.1 -5.36441 | gap 1, opp_overlap 2015290, overlap 2015290 2015291 TTTTCTCCAGCCAAT CGCGACGG TCCG CCG-CGCG TTTTTTGTCTAAGAG TERM 2312 2015291 - 2015307 + g 70 -9.3 -2.87962 | opp_overlap 2015290, overlap 2015290 2015291 TTTTCTCCAGCCAAT CGCGACG GTC CGCCGCG CGTTTTTTGTCTAAG TERM 2313 2016748 - 2016764 + g 71 -3 -5.00616 | overlap 2016749 ATTTTGCCGTCTTTT TTTACC TGAAC GGTAAG TTTTTTGGACAGCGC TERM 2314 2018012 - 2017969 - g 79 -8.3 -4.0896 | gap 3 AAATCGCTTCGAAAA TCATGGG-GCGAGC-GCC-TGA CGC TCATGGCAGCCAGCACCCATGA AGGTGAAGAAATTAT CBUD_2045 2017213 - 2018565 + | 3-deoxy-D-manno-octulosonic-acid transferase CBUD_2044 2020059 - 2018551 - | DnaJ domain protein TERM 2315 2018656 - 2018645 - G 73 -5.8 -4.46212 | overlap 2018646 2018647 TCTCTTAGCATAAAA TGCG TGTC CGCA TGCGCCGACCAAAAG CBUD_2046 2021696 - 2020080 - | hypothetical protein CBUD_2046a 2022039 - 2021929 - | hypothetical protein TERM 2316 2022121 - 2022103 - R 72 -10.2 -2.71731 | CGCAGGCGGGAACCA GGCGCACC TTC GGTGCGCT GCGCAAGTGTGCGCT CBUD_2046b 2022207 - 2022079 - | hypothetical cytosolic protein CBUD_2047 2024105 - 2022255 - | type I secretion outer membrane protein TERM 2317 2022468 - 2022480 + g 77 -6.3 -4.66609 | AATACGAAGATCATG CAAAC GGT GTTTG TTTTTGAATGCAGTA TERM 2318 2023952 - 2023979 + g 73 -5.5 -4.58395 | gap 1, overlap 2023954 2023956 CGATAGGAAGGTTTT GC-CTTGCGGAC AACCA GTCCGCGTGTGC TTTTTGAAAAGTGGG ubiA 2025080 - 2024217 - | 4-hydroxybenzoate polyprenyltransferase CBUD_2049 2025630 - 2025073 - | chorismate--pyruvate lyase TERM 2319 2025661 - 2025618 - G 77 -4.6 -5.00616 | GTGGGGCCCAAAAAA GTTGCTTCTTCATGCTCCAC GACA GTAGAAGATGTAGAAACGAC AGTCAAGTTACTTAG enhA.3 2026449 - 2025700 - | enhanced entry protein TERM 2320 2026819 - 2026838 + G 73 -3.6 -5.03145 | opp_overlap 2026819 TCAGGTGTTAGAAAC TTTGCCAA TCAT TTGGAAAA TTTTTTAGAAAATTA CBUD_2051 2026558 - 2027142 + | hypothetical protein CBUD_2052 2027167 - 2027769 + | hypothetical cytosolic protein CBUD_2053 2027962 - 2029272 + | hypothetical protein CBUD_2054 2029308 - 2030306 + | periplasmic component of efflux system TERM 2321 2030588 - 2030603 + G 71 -4.6 -4.64334 | overlap 2030574 ACGAGGATTTAAGCG TCGCGG AAAA CCTCGA TTTTATTGCGCGATT CBUD_2055 2030290 - 2031228 + | export ABC transporter ATP-binding protein CBUD_2056 2031218 - 2032357 + | export ABC transporter permease protein CBUD_2057 2032405 - 2032965 + | outer membrane protein TERM 2322 2032995 - 2032974 - T 100 -12.3 -4.68424 | opp_overlap 2032974 GAATTGAGTTAAAAA TCTCGGCCG CAAG CGACCGAGA TTTCTTTAAACTGAT TERM 2323 2032974 - 2032995 + T 90 -10.1 -4.44448 | opp_overlap 2032974 GAATTGAGTTAAAAA TCTCGGCCG CAAG CGACCGAGA TTTCTTTAAACTGAT CBUD_2058 2033817 - 2033062 - | hypothetical protein TERM 2324 2033910 - 2033921 + r 73 -7.2 -4.12532 | opp_overlap 2033909 GGTATTTTGATTAAC CCCC GGGA GGGG TTTCTCTATACCAAA CBUD_2059 2034529 - 2033927 - | xanthosine triphosphate pyrophosphatase TERM 2325 2034806 - 2034819 + G 74 -8.1 -3.93401 | AAAAAATTTGGATGC CGGAG GGTT CTCCG TTATTAGTTTATAGC hemH 2034553 - 2035617 + | ferrochelatase CBUD_2061 2035716 - 2037848 + | hypothetical protein TERM 2326 2037896 - 2037941 + F 100 -24.3 -3.86897 | opp_overlap 2037885 2037896 AGTAGCCCGTATAAA GCGAAGCGCAATACGGGGA AATAATAA TTCCCGTATTGCGCTTCGC TTTATACGGGCTACG TERM 2327 2037941 - 2037896 - f 100 -22.9 -3.87075 | gap 1, opp_overlap 2037896, overlap 2037885 AGTAGCCCGTATAAA GCGAAGCGCAATACGGGGAAAT AAT AATT-CCCGTATTGCGCTTCGC TTTATACGGGCTACG TERM 2328 2038280 - 2038305 + G 84 -2.5 -5.60993 | gap 1, overlap 2038282 2038283 AAGTTTTCTATTGAA GA-TGTCCGCTT TTC AGGCGGGCCCTC TTTTTTTATAAAAAA TERM 2329 2039856 - 2039870 + G 76 -7.8 -4.07687 | TTTATGACGTCCCTT TCGCCG TTT TGGCGA TTTTAAGGAAAAGGT CBUD_2063 2038037 - 2040151 + | hypothetical cytosolic protein hemK 2040955 - 2040122 - | peptide release factor-glutamine N5-methyltransferase TERM 2330 2040175 - 2040154 - G 73 -8.7 -3.56092 | opp_overlap 2040169 CCATCATCCTTGAAA GACCGGC TAAATCAC GCCGGTC GGTAATTTCGCGATA prfA 2042043 - 2040958 - | bacterial peptide chain release factor 1 (RF-1) hemA 2043335 - 2042040 - | glutamyl-tRNA reductase TERM 2331 2042493 - 2042503 + g 73 -8.2 -3.60475 | opp_overlap 2042477 2042500, overlap 2042488 2042500 CCGACGTTTACGCTG GCGC AAA GCGC TTTCAACTGCGCCTT TERM 2332 2043978 - 2043966 - g 86 -3.3 -5.63517 | opp_overlap 2043966 TCCGGAAACAAAAAA GACCG AAT CGGTT CCTTTTAAAATGGGC CBUD_2067 2043358 - 2044587 + | multidrug resistance protein D folB 2044918 - 2044565 - | dihydroneopterin aldolase TERM 2333 2044636 - 2044653 + g 79 -8.5 -4.08216 | AGGGTTTAGTGATGC TGAGTTG AAGC CAACTCA TTTTAAAGCGCGTCA dksA 2045360 - 2044911 - | DnaK suppressor protein dapF 2046332 - 2045502 - | diaminopimelate epimerase CBUD_2070 2046480 - 2046322 - | hypothetical protein TERM 2334 2046423 - 2046435 + g 77 -3.5 -5.14563 | overlap 2046420 AAAAAGCAAGGCTTA TTATT AAT AATAA TTTTTTCATGACGAA CBUD_2071 2046902 - 2046681 - | bacterial regulatory protein, luxR family TERM 2335 2046894 - 2046884 - G 76 -6.8 -4.41348 | opp_overlap 2046891 TCGGGGTTAAATAAA CACC GGG GGTG TGAATCACCTATATA CBUD_2072 2047072 - 2046917 - | hypothetical cytosolic protein CBUD_2072a 2047082 - 2047177 + | hypothetical protein TERM 2336 2047351 - 2047362 + G 75 -2.2 -5.34309 | GGGTTGCCGGAGGAT TTGC ATTT GCGA TTTTTGTTTCCTCAT TERM 2337 2047849 - 2047875 + G 81 -7.2 -4.65747 | CAGGAGGAAATCGAG GCGATTGGAAAG TGG CTAACCGATCGC TTTTCTTAAACGTTC CBUD_2074 2047174 - 2047884 + | carboxylesterase CBUD_2073 2048523 - 2047864 - | mannose-1-phosphate guanyltransferase CBUD_2075 2049626 - 2048529 - | 7.5 kDa chlorosome protein TERM 2338 2049283 - 2049249 - GH 75 -2.2 -5.29445 | overlap 2049250 CGTTAATAACAAAAA GCCCTGTTTCTTAT CTTCAGC ATAAATAACAGGGA CATTTAAACCCAATT TERM 2339 2049759 - 2049771 + GH 73 -5.5 -4.57837 | overlap 2049760 CTCTACCCACCGGTT TGTCG TAT CGACG TTTTTACCAGCATAT TERM 2340 2050387 - 2050397 + GH 100 -5.4 -5.85244 | overlap 2050385 GCTTTTGCATATCGG TAGG GTG CCTA TTTTTTATTTTCCTT TERM 2341 2050462 - 2050446 - gH 71 -6.5 -4.17425 | opp_overlap 2050459 ATAATTATCGGAAAA CGGGTTT TTT AATCCCG TACGCGGGGCATAGC TERM 2342 2051634 - 2051647 + GH 72 -9.5 -2.99932 | GTGTTTGTCTCACTC CGGGG TGCA CCCCG TCTAATTATCATTAT ostA 2049608 - 2052220 + | organic solvent tolerance protein TERM 2343 2052899 - 2052883 - g 73 -3.7 -5.00765 | overlap 2052885 AAGCAATTACAAAAA GGTTCAA GCT TTGAAAC AGCAATGAAAATGCA CBUD_2077 2052226 - 2053191 + | peptidyl-prolyl cis-trans isomerase pdxA 2053191 - 2054114 + | 4-hydroxythreonine-4-phosphate dehydrogenase TERM 2344 2054117 - 2054159 + F 100 -18 -4.07687 | opp_overlap 2054117, overlap 2054120 TGCTCTTTCATAAAA GAACCGGTTCTTTTTATAAG TTC CCTATTAAAAGAACCGGTTC TTTTGACGGCAAACT TERM 2345 2054159 - 2054117 - f 100 -20.2 -4.36914 | opp_overlap 2054117 2054120 TGCTCTTTCATAAAA GAACCGGTTCTTTTTATAAG TTC CCTATTAAAAGAACCGGTTC TTTTGACGGCAAACT TERM 2346 2054120 - 2054156 + F 100 -13.9 -4.17048 | opp_overlap 2054117, overlap 2054117 TCTTTCATAAAAGAA CCGGTTCTTTTTATAAG TTC CCTATTAAAAGAACCGG TTCTTTTGACGGCAA TERM 2347 2054274 - 2054246 - f 84 -10.3 -3.87551 | overlap 2054247 ACTACCAAACTTAAA CCCGTCATTCCGC TCG GGGGAATGACGAA GCCTTAAACTGAAAT TERM 2348 2054273 - 2054247 - f 80 -11.6 -2.91807 | overlap 2054246 CTACCAAACTTAAAC CCGTCATTCCGC TCG GGGGAATGACGA AGCCTTAAACTGAAA ksgA 2054299 - 2055075 + | dimethyladenosine transferase CBUD_2080 2055188 - 2055622 + | universal stress protein A CBUD_2081 2055791 - 2056165 + | hypothetical protein TERM 2349 2056200 - 2056176 - f 80 -10.7 -3.40309 | opp_overlap 2056176, overlap 2056169 CATAATTAGCCACAA CCCTGGCGACT TTT AATCGCTAGGG TTTTTTATATTGTTA TERM 2350 2056176 - 2056200 + F 100 -10.7 -5.55695 | opp_overlap 2056169 2056176 CATAATTAGCCACAA CCCTGGCGACT TTT AATCGCTAGGG TTTTTTATATTGTTA CBUD_2083 2056210 - 2056908 + | hypothetical protein TERM 2351 2057633 - 2057594 - g 95 -8 -5.04987 | overlap 2057583 AAGACGTTGAAAAAA TCAACAAAGTATTGGCCC AAGT GCACCAAAACTTTATTGA CCAAGTTATTCAGGG sppA 2056972 - 2057913 + | signal peptide peptidase TERM 2352 2058510 - 2058527 + G 75 -5.5 -4.91109 | GCGCTACATTTGCAA CGCATTC ACTC GTATGCG TTTTTGTGATGCCAA apaH 2057926 - 2058801 + | bis(5'-nucleosyl)-tetraphosphatase, symmetrical CBUD_2085a 2058950 - 2059084 + | hypothetical protein TERM 2353 2060168 - 2060154 - T 75 -7.8 -4.07687 | AGTCTGTGGTTAAAA GCACTC ATT GAGCGC CGCGGAATGAATCGC CBUD_2087 2060536 - 2060264 - | hypothetical protein TERM 2354 2060605 - 2060548 - H 73 -9.5 -3.21354 | gap 3, opp_overlap 2060548 CCATATACGTATGAA GCGAAGCGGAATACGGGAAAACAAT-GA TGTCG TCTATCGTC--CCCGTATTTCGCTTCGC TTCATACGGGCTACT relB 2060728 - 2060982 + | RelB relE 2060982 - 2061257 + | RelE folA 2061715 - 2061230 - | dihydrofolate reductase CBUD_2092 2062515 - 2061712 - | hypothetical cytosolic protein CBUD_2095 2062669 - 2062998 + | acylphosphatase CBUD_2094 2063528 - 2062974 - | phosphatase family protein fmt 2064485 - 2063541 - | methionyl-tRNA formyltransferase TERM 2355 2065291 - 2065269 - g 77 -6.2 -4.63486 | opp_overlap 2065268 2065290 AGCCGCCGAACAAAA CCGGGAAG TTTTCGC CATCCCGG GTTCAATCCGAAACC TERM 2356 2065471 - 2065506 + G 76 -7.6 -4.19953 | TGCATCGGATTTGAG GTCACTTCCATTGATC AACT GATCGCTCGAAGTGGC TTTTCGGCTTCCATC dprA 2064673 - 2065599 + | DNA processing protein CBUD_2099 2065596 - 2066075 + | smg protein TERM 2357 2067141 - 2067127 - g 82 -4.9 -5.41359 | overlap 2067128 AACCAAATCAAAAAA CGCGC AAGAA GCGCA CGAAGCTATTCGTCC TERM 2358 2068348 - 2068310 - g 86 -6.9 -4.96848 | gap 1 CGCGGCACAGAAAAA GTATGCCCCCAAAAAAGT TGTA ACTTTAT-AGAGGCATAC GATGGAGACAAACCA topA 2066078 - 2068375 + | DNA topoisomerase I CBUD_2100a 2068552 - 2068382 - | hypothetical protein TERM 2359 2068781 - 2068750 - g 100 -13.6 -3.36919 | opp_overlap 2068752 2068753, overlap 2068741 AGAAAATGCTGACAA CCGCGGCTGCGCCG TCTT CATCGCAGCCGCCG GCCTCGCCGCCCATC purE 2068583 - 2069083 + | phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit CBUD_2103 2069086 - 2069646 + | Sua5/YciO/YrdC/YwlC family protein TERM 2360 2069958 - 2069922 - f 70 -9.5 -2.56728 | opp_overlap 2069924, overlap 2069921 2069935 AGGACCCAGATTAAG GGGCTAAGAAAAACACC AAT GGCGCTTTTCTTAGCTT TTTAGCCGGGATTCC TERM 2361 2069924 - 2069956 + F 95 -12.1 -4.57341 | opp_overlap 2069922 2069921 2069935 GACCCAGATTAAGGG GCTAAGAAAAACACC AAT GGCGCTTTTCTTAGC TTTTTAGCCGGGATT TERM 2362 2069945 - 2069935 - f 76 -4.6 -5.06816 | opp_overlap 2069924, overlap 2069922 2069921 AGGGGCTAAGAAAAA CACC AAT GGCG CTTTTCTTAGCTTTT CBUD_2104 2070089 - 2070229 + | hypothetical protein CBUD_2105 2071362 - 2070307 - | ADP-heptose--LPS heptosyltransferase rstB 2072647 - 2071370 - | sensor protein CBUD_2107 2073381 - 2072644 - | two-component response regulator CBUD_2108 2074617 - 2073430 - | hypothetical protein TERM 2363 2075906 - 2075919 + G 100 -9.5 -5.01732 | CATCATGGTTATATT CCCCG TATT CGGGG TTTTTTAAAGGGGTT TERM 2364 2076243 - 2076222 - g 73 -5.2 -4.65895 | gap 1, overlap 2076225 TTCGCCAGCTAAAAA CGA-CCCAA AAAAA TTGGGATCG ACCGCGAGGAATGGA argS 2074763 - 2076541 + | arginyl-tRNA synthetase TERM 2365 2077850 - 2077825 - g 76 -10.7 -2.69874 | opp_overlap 2077831, overlap 2077824 2077831 ATAAACTACGATAAG GGTAAATTATT AGTT AATAATTTACC GTCCCATGCTCCGCA CBUD_2110 2076538 - 2077872 + | hypothetical protein CBUD_2111 2077869 - 2078183 + | hypothetical protein TERM 2366 2078288 - 2078272 - f 77 -10.8 -2.87564 | opp_overlap 2078284 GGATGTCTCTAGATA CCGCGG TCAAG CCGCGG ACGACGTGCTTTTAA hslV 2078374 - 2078988 + | ATP-dependent endopeptidase hsl proteolytic subunit TERM 2367 2079289 - 2079333 + G 72 -10.1 -2.87211 | overlap 2079283 2079284 TCCGATCTCGCGGGT GCCCCCTTCCTTAAAATTG AAGCAAC CAAATTTACGGAAGTGGGC TATGTCGGGCGCGAT hslU 2079013 - 2080410 + | ATP-dependent endopeptidase hsl ATP-binding subunit CBUD_2113 2081461 - 2080364 - | hypothetical protein TERM 2368 2081642 - 2081652 + G 74 -4 -5.06735 | TCTCGTATGTTATTC TCTT AAA AAGA TTTTTCTCATTTATC CBUD_2115 2081569 - 2082168 + | hypothetical membrane associated protein CBUD_2116 2083667 - 2082189 - | di-/tripeptide transporter TERM 2369 2083917 - 2083904 - g 77 -3.9 -5.09895 | TAGCTATTCAAAAAA TTGAA GAAA TTCAA GATTGTTTATTGCAT CBUD_2117 2083849 - 2084445 + | hypothetical cytosolic protein TERM 2370 2084832 - 2084843 + G 73 -7.2 -4.18018 | opp_overlap 2084813, overlap 2084841 CCATGCTGAACGTGG GGCG TCGT CGCC TTTTGGATCAAGGCA ubiE 2084525 - 2085277 + | ubiquinone/menaquinone biosynthesis methyltransferase CBUD_2119 2085277 - 2085891 + | hypothetical protein ubiB 2085888 - 2087513 + | 2-polyprenylphenol 6-hydroxylase accessory protein TERM 2371 2087676 - 2087642 - T 82 -8.6 -4.15453 | opp_overlap 2087654 GAATCCAGGCTAAAA GTCTAAGAAAAGCGCC ATC GGTGTTTTTCTTAGCC CCCTAATCTGGGTCC TERM 2372 2087654 - 2087664 + T 76 -4.6 -5.06414 | opp_overlap 2087642 AAAGTCTAAGAAAAG CGCC ATC GGTG TTTTTCTTAGCCCCC CBUD_2121 2089348 - 2087918 - | glutamate/gamma-aminobutyrate antiporter TERM 2373 2088145 - 2088157 + g 77 -4.9 -4.97824 | TTCCTCCCGGAATTC GAAAA CAT TTTTC TTTTCTTTCAGTTTT TERM 2374 2088344 - 2088331 - G 75 -5.9 -4.71426 | opp_overlap 2088336 2088337 CTTGCATCAACAAAA CACCC AGAG GGGCG CCTCGTTTATTTCGA TERM 2375 2088750 - 2088732 - G 71 -2.4 -5.19212 | ACCACTACTAAAAAA GCCAAATT AGG AATATGAC TAAAATGAGGAATAA CBUD_2122 2090705 - 2089410 - | hypothetical ATPase CBUD_2124 2092507 - 2092262 - | hypothetical protein CBUD_2125 2092585 - 2093535 + | cystathionine beta-synthase TERM 2376 2094121 - 2094107 - g 75 -5.7 -4.58395 | TTGATCTTGCAAAAA TTGCG GAAAT CGCAA AAGAAAAAAATATCA TERM 2377 2094325 - 2094315 - g 87 -8.2 -4.49781 | opp_overlap 2094322, overlap 2094316 2094317 AAAATATTTACAAAA CGCC ATA GGCG CTATCGCCGCGCCTT CBUD_2126 2093614 - 2094777 + | cystathionine gamma-lyase TERM 2378 2094788 - 2094817 + T 100 -9.9 -5.81032 | opp_overlap 2094769 2094766 2094782 2094788 2094789, overlap 2094769 2094789 TTTAAAAAACTTAAA GCCCTCATCTCCG CAGG CGGGGACGAGGGG TTTTTTTTGAAATTA TERM 2379 2094817 - 2094788 - T 86 -9.9 -4.05875 | opp_overlap 2094769 2094788 2094789, overlap 2094769 2094766 2094782 2094789 TTTAAAAAACTTAAA GCCCTCATCTCCG CAGG CGGGGACGAGGGG TTTTTTTTGAAATTA TERM 2380 2094816 - 2094789 - T 91 -13.4 -3.0244 | opp_overlap 2094769 2094788 2094789, overlap 2094769 2094766 2094788 2094782 TTAAAAAACTTAAAG CCCTCATCTCCG CAGG CGGGGACGAGGG GTTTTTTTTGAAATT TERM 2381 2094789 - 2094816 + T 100 -13.4 -4.06993 | opp_overlap 2094769 2094766 2094789 2094788 2094782, overlap 2094769 2094788 TTAAAAAACTTAAAG CCCTCATCTCCG CAGG CGGGGACGAGGG GTTTTTTTTGAAATT CBUD_2127 2095469 - 2094990 - | hypothetical protein CBUD_2128 2095805 - 2095518 - | hypothetical protein CBUD_2129 2096811 - 2096014 - | hypothetical protein TERM 2382 2096135 - 2096151 + g 84 -10.9 -3.6284 | TGTTGTTGTTTTTTA GCCCATT GAT AATGGGC TTTCCAATCATCCTT TERM 2383 2096777 - 2096788 + g 100 -4.4 -5.9873 | GGTGCATTTTGGTAA GCTT CAAG AAGC TTTTTTTTCTCATCA TERM 2384 2096831 - 2096847 + r 100 -15.1 -2.94464 | overlap 2096826 TCAGTTCTCTTTAGG GGGCGGC TGT GCCGCCC TGTCGTATTAATCTT CBUD_2130 2097487 - 2096855 - | hypothetical protein metK 2097625 - 2098806 + | S-adenosylmethionine synthetase TERM 2385 2099974 - 2099960 - g 75 -5.6 -4.60487 | opp_overlap 2099962, overlap 2099962 CAGTATCCTGAAAAA TACCCC ATC GGGGTT TACGTTTTACCCAAA TERM 2386 2099962 - 2099972 + G 77 -8.2 -3.92659 | opp_overlap 2099960 2099962 GTATCCTGAAAAATA CCCC ATC GGGG TTTACGTTTTACCCA TERM 2387 2099972 - 2099962 - g 77 -8.2 -3.91506 | opp_overlap 2099962, overlap 2099960 GTATCCTGAAAAATA CCCC ATC GGGG TTTACGTTTTACCCA ahcY 2098808 - 2100124 + | adenosylhomocysteinase CBUD_2133 2100151 - 2101149 + | GGDEF family protein TERM 2388 2101976 - 2101961 - g 71 -9 -3.38812 | overlap 2101942 2101939 2101941 TCCTCTGGAAGAAGA GGCTTC ACCA GAAGCC GGCCTGTCTCCGGAA TERM 2389 2102079 - 2102061 - g 75 -8.8 -3.61398 | TTGCCTCCGGAAGAA GAGCCGCC TGT AACGGCTC CTCCCGAGGAAGAAG CBUD_2134 2101308 - 2102549 + | hypothetical membrane associated protein CBUD_2134a 2102824 - 2102648 - | hypothetical protein TERM 2390 2102720 - 2102687 - Gf 77 -6.5 -4.58297 | overlap 2102689 GACCAAAAACATAAA GCCCGTCATCCCCGC GCAG GCGGGGATCCAGCGC ACACATGCGCAGCGC TERM 2391 2102731 - 2102749 + gF 73 -10.2 -2.52464 | opp_overlap 2102726 AGCGCACACATGCGC AGCGCACC GAA GGTGCGCC TGGATTACCGCCCGC TERM 2392 2104130 - 2104149 + GH 71 -6.4 -4.18018 | AGAGAAAATCGCTTA TTTGCCAG CACG CGGGCAAA TTTTCCGTGGCACAC CBUD_2135 2102823 - 2104568 + | multidrug resistance ABC transporter ATP-binding and permease protein TERM 2393 2105211 - 2105201 - g 71 -4 -4.82901 | overlap 2105205 GCGCTTTTAGAAAAA TTAC GAA GTAA CCTCATGACTTATAT CBUD_2136 2104565 - 2106679 + | type I protein secretion ATP-binding protein TERM 2394 2107500 - 2107475 - g 76 -6.9 -4.51196 | gap 1, overlap 2107477 CTGAAATGCAGAAAA TGGCTGACCGTT TAC AACGGTC-GCAA CACGAATTATTCCAG CBUD_2137 2106676 - 2108004 + | type I secretion adaptor protein (HlyD family) CBUD_2138 2107994 - 2108365 + | transcriptional regulatory protein TERM 2395 2109590 - 2109578 - g 75 -5.5 -4.87893 | AATGGCAATCAAAAA TCCCC GTA GGAGA AATTAAATTATCCAT CBUD_2139 2108362 - 2110095 + | sensory box/GGDEF family protein CBUD_2138a 2110433 - 2110083 - | hypothetical protein TERM 2396 2111272 - 2111262 - g 79 -3.2 -5.40072 | opp_overlap 2111268 TCCCTTCCAAAAAAA CAGC AAC GCTA ACGGCGATTGATAAT CBUD_2141 2110481 - 2112478 + | chitinase TERM 2397 2112567 - 2112585 + F 74 -3.8 -5.09426 | gap 1, overlap 2112567 TTAGACTTCACCATT CC-CGGG CGGGAA CCCGAGG TTTTTTGAAATTAAG TERM 2398 2112729 - 2112674 - g 100 -22.6 -3.54424 | gap 1, opp_overlap 2112714 2112717 CGTCATTCCCGCAAA GGCGGGAATCCAGCGCGCTTTAGCGCG CTG CGCAC-ACAGTGCGCTGGGTCCCCGCC TGCGCGGGGACGACA CBUD_2141a 2112590 - 2112787 + | hypothetical protein TERM 2399 2112842 - 2112880 + T 100 -13 -4.14392 | opp_overlap 2112845, overlap 2112856 CGCGAAGGCGGGAAT CCAGCGCGCTTTTAGCGC GCT GCGCACGCAGTGCGCTGG TTTTGGAAATTAAGA TERM 2400 2112861 - 2112845 - T 91 -13.7 -2.53213 | opp_overlap 2112842 2112856 GAAGGCGGGAATCCA GCGCGCT TTT AGCGCGC TGCGCACGCAGTGCG TERM 2401 2112856 - 2112877 + T 93 -13.7 -3.09718 | opp_overlap 2112845, overlap 2112842 TCCAGCGCGCTTTTA GCGCGCTGC GCAC GCAGTGCGC TGGTTTTGGAAATTA metF 2113819 - 2112947 - | methylenetetrahydrofolate reductase TERM 2402 2113813 - 2113823 + g 74 -6.8 -4.30477 | opp_overlap 2113804 GAGAAAGATGCGACG CGTC CAT GACG TTTGTCTCTTATTTA metE 2116163 - 2113836 - | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase TERM 2403 2114950 - 2114966 + g 93 -2.9 -5.97575 | opp_overlap 2114947, overlap 2114951 CGCCGCATCAAACGT TCGGTAA CGC TTGCCGC TTTTTTTTCTACGTT TERM 2404 2116264 - 2116287 + r 80 -6 -4.8048 | overlap 2116267 GTTTTTTAATGCCCG CAAGCTGATT ATCA AATCGGCATG TTTTTAATATAACGA trpS 2117418 - 2116348 - | tryptophanyl-tRNA synthetase CBUD_2146 2118487 - 2117450 - | hypothetical protein TERM 2405 2117553 - 2117532 - G 73 -5.2 -4.64861 | opp_overlap 2117539, overlap 2117528 GGCCTCGAAAACAAA TTAACCCC CTCCCC GAGGTTAA ATTGTGAATTTTCCT TERM 2406 2117673 - 2117662 - G 78 -2.2 -5.45813 | GACTAAAAAACAAAA CTGG TGAT CCAA CGGGGATACTTCCTA CBUD_2146a 2118853 - 2118614 - | hypothetical protein CBUD_2147 2119813 - 2118917 - | hypothetical protein TERM 2407 2119154 - 2119143 - G 73 -3.6 -5.04249 | GGGCTAAAAAAGAAA GAGG GAGA CCCC AAGGACGGGGAGTTC uvrD 2120194 - 2122365 + | DNA helicase II TERM 2408 2122676 - 2122689 + G 74 -4.5 -4.82901 | overlap 2122677 2122680 ATCCCTTATTGTTGT TGTCG CCAT CGACG TTTTTATCGACGGCA CBUD_2150 2122362 - 2123075 + | zinc uptake transporter CBUD_2151 2123789 - 2123121 - | hypothetical protein CBUD_2152 2124948 - 2123971 - | hypothetical cytosolic protein CBUD_2153 2126697 - 2125366 - | proline/betaine transporter TERM 2409 2125561 - 2125525 - G 70 -3.7 -4.76802 | gap 1 TTTAAAAATAAGAAA CGTGCATATGAGGGGG CTTAAT CCGCCCCATAT-CGCG TAGCCGAGGTTATAA CBUD_2154 2128467 - 2126875 - | hypothetical cytosolic protein TERM 2410 2127943 - 2127959 + g 78 -5.1 -5.00027 | opp_overlap 2127943 2127941 GGGAAGAAGAAAATA TTCGACG TTT CTTCGAA TTTTATATTTTTCAT CBUD_2154a 2128742 - 2128605 - | hypothetical protein TERM 2411 2129285 - 2129270 - R 89 -5.4 -5.42265 | CCAAATTATAAAAAA TTCCCG GCTC CAGGAA GAAAATTCAAAGGAA TERM 2412 2129593 - 2129610 + r 82 -8.5 -4.14345 | ACGCGCTACCCCTTT CATCCTT TCCA AAGGATG TTTCGTTTCGTATTC TERM 2413 2130065 - 2130054 - R 76 -4.4 -5.09895 | TATTTATTCAAAAAA CTTC GGCT GAAG AGCTAGAACAAATAT CBUD_2157 2130822 - 2130184 - | hypothetical protein CBUD_2159 2133000 - 2131642 - | transporter, MFS superfamily TERM 2414 2132652 - 2132611 - G 77 -3.7 -5.10665 | gap 1 ACTTAAGAAACAAAA TGCGC-TCCCAATTCCGGTT AAA AACCGAAAAAGAGAAGCCCA GAAAATCGATGTTGT CBUD_2160 2134321 - 2132981 - | transporter, MFS superfamily TERM 2415 2133094 - 2133072 - G 71 -4.9 -4.66938 | gap 1, opp_overlap 2133072, overlap 2133076 AGCGCTAACACAAAA GCAATTGGCA TAAT CGCCAAT-GC TAATTGATAATCGCT TERM 2416 2133193 - 2133179 - G 85 -5.7 -5.18357 | TAAGCGAGCAAAAAA GGGTT GGGTG AACCC GCCGGCCATAATTAA TERM 2417 2133405 - 2133385 - G 73 -9.7 -3.01783 | overlap 2133380 2133376 2133388 TTAAAATTAACGACA CAATGGCGC CAA GCACCATCG GCATGCGGCGACGCT TERM 2418 2133402 - 2133388 - G 70 -7.8 -3.63078 | overlap 2133380 2133376 2133385 AAATTAACGACACAA TGGCGC CAA GCACCA TCGGCATGCGGCGAC TERM 2419 2133597 - 2133617 + g 78 -5.4 -5.05712 | opp_overlap 2133597, overlap 2133591 AGTGAGGTATATAAA CCCCCAAA CCAAT TTTGGCGG TTTTTAATTGTTTGT TERM 2420 2134252 - 2134240 - G 86 -7.7 -4.7261 | AGGCAGCAAAACAAA CAACC CAA GGTTG CAAAGGGTAATCGTA tdk 2135052 - 2134462 - | thymidine kinase CBUD_2163 2135479 - 2135069 - | chorismate mutase family protein TERM 2421 2135653 - 2135639 - g 95 -7.2 -5.48825 | opp_overlap 2135639 CAGTACTCAAAAAAA CAAATC GTG GATTTG TACCTTTCCTATTTT CBUD_2164 2135555 - 2136037 + | hypothetical membrane spanning protein TERM 2422 2136121 - 2136078 - T 73 -8.5 -3.6682 | gap 2, opp_overlap 2136078 2136113 CTGTATGGAGCGAAA CGAAATACGGGA-AACA-ATG ATGT CATCTATCATCCCGTATTTCG CTTCATAATACGTAT CBUD_2165 2137281 - 2136289 - | transposase CBUD_2167 2137384 - 2137500 + | hypothetical protein TERM 2423 2137596 - 2137610 + F 75 -7.8 -4.07687 | GCGATTCATTCCGCG GCGCTC AAT GAGTGC TTTTAACCACAGACT CBUD_2168 2138727 - 2139224 + | hypothetical protein CBUD_2169 2139260 - 2140162 + | acyltransferase family protein TERM 2424 2140446 - 2140467 + G 86 -8.7 -4.30576 | GTCGGTGCTTTTATT CGTCGCG AAGATCCA CGCGACG TTTTAATAGTAAAGG hemC 2140146 - 2141069 + | porphobilinogen deaminase TERM 2425 2141266 - 2141227 - g 70 -3.7 -4.81083 | gap 1 GCGAATTATTAAAAA TCATACCC-ACAAAAAAG CTATC CTTTGCTGTCGGGCACGA GCGGACGGCGGAAAG aroD 2141069 - 2141770 + | 3-dehydroquinate dehydratase CBUD_2172 2141780 - 2142097 + | hypothetical protein hemD 2142087 - 2142893 + | uroporphyrinogen-III synthase TERM 2426 2142977 - 2143024 + T 72 -9.5 -3.09516 | gap 2, opp_overlap 2142977 GCCCGTATGAGCGAA GCGAAATACGGGGACGATAGATG ACAT CAT-TGTT-TTCCCGTATTTCGC TTCGCTCATACGGGC CBUD_2174 2144085 - 2143039 - | Fic family protein TERM 2427 2144485 - 2144498 + G 75 -5.9 -4.59414 | GCCGCGTCTTTAAGC GCCGC TAGC GTGGC TTTTAGTTCTTATCA CBUD_2175 2144395 - 2144799 + | hypothetical protein TERM 2428 2144816 - 2144777 - f 70 -3.5 -4.86226 | opp_overlap 2144777, overlap 2144810 2144811 ATACCAAAAAAATAA GCGGAGGTCATGGCTGC GGCTAA ACATCCATAAGCTTCGC CTTTCCCGCGAAGAA CBUD_2176 2144880 - 2145842 + | uroporphyrin-III C-methyltransferase TERM 2429 2146730 - 2146720 - g 78 -4 -5.08824 | TCTGCACTTAAAAAA GAAT GGA ATTC CAATTTAGTTTCTAC hemY 2145847 - 2147025 + | HemY CBUD_2178 2147028 - 2147795 + | hypothetical protein queC 2147813 - 2148547 + | queuosine biosynthesis protein TERM 2430 2148608 - 2148569 - f 82 -11.7 -3.07816 | gap 1, opp_overlap 2148578, overlap 2148575 CCCGTATGGAGCGAA GCGAAATACGGGGAATTA AAACG CAATT-CCCGTATTCCGC TAACGCCCCATACGG CBUD_2181 2148823 - 2148942 + | hypothetical protein CBUD_2182 2148954 - 2149250 + | hypothetical protein TERM 2431 2149370 - 2149409 + T 82 -11.7 -3.07816 | gap 1, opp_overlap 2149378, overlap 2149376 CCGTATGGGGCGTTA GCGGAATACGGG-AATTG TGTTT TAATTCCCCGTATTTCGC TTCGCTCCATACGGG rho 2150693 - 2149437 - | transcription termination factor rho TERM 2432 2150370 - 2150392 + g 71 -4.8 -4.72272 | opp_overlap 2150359, overlap 2150359 TAAAGCGAAGTAGCG TTCGCTTTCT TTA GGGGGGCGAA TTTTTCCTGAAACCG trxA 2151207 - 2150869 - | thioredoxin TERM 2433 2151291 - 2151301 + r 70 -5.4 -4.37658 | opp_overlap 2151291 GAGGCAGTAAGAGTA GGAA CAT TTCC TTTTATGCAGCCGTT CBUD_2185a 2151529 - 2151398 - | hypothetical protein TERM 2434 2151925 - 2151941 + G 72 -8 -3.78793 | GGGGCTTACTGGGCT GGCTAG GGGCG CTAGCC TTATTACTCATTCTG TERM 2435 2152549 - 2152570 + G 80 -2.9 -5.42458 | gap 1 TCTTAGCTCATTTGT CCTCCGGCTG GTT CA-TCGGCGG TTTATTTTTTTTATT TERM 2436 2152679 - 2152668 - g 70 -5.8 -4.25104 | opp_overlap 2152650, overlap 2152652 CGTTTGGGACTAAAA CGCA CTTA TGCG GCTATCATTATTGGT TERM 2437 2152891 - 2152881 - g 75 -5.4 -4.82333 | ACAATAACGCAAAAA GAAG TTC CTTC AGAAATCTATTCGAT CBUD_2187 2151621 - 2152973 + | sodium-dependent transporter, SNF family TERM 2438 2152974 - 2152997 + T 83 -11 -3.66666 | overlap 2152975 2152976 ATCAGTTCAATTTGA ATCTCGGTCG CAAG CGACCGAGAC TTTCCCCATTTTGAA TERM 2439 2152975 - 2152996 + T 93 -14.5 -2.79518 | overlap 2152974 2152976 TCAGTTCAATTTGAA TCTCGGTCG CAAG CGACCGAGA CTTTCCCCATTTTGA TERM 2440 2153010 - 2153039 + T 81 -2.7 -5.58209 | overlap 2152976 2153015 GACTTTCCCCATTTT GAATTTCGCCGCG CTTG CGCCGGGGATTTC TTTTTTTAAATTTAA TERM 2441 2153015 - 2153035 + T 76 -3.2 -5.21683 | gap 1, overlap 2152976 2153010 TCCCCATTTTGAATT TCGCC-GCG CTTG CGCCGGGGA TTTCTTTTTTTAAAT CBUD_2188 2153649 - 2153068 - | integral membrane protein proC 2154470 - 2153646 - | pyrroline-5-carboxylate reductase CBUD_2190 2155153 - 2154467 - | hypothetical cytosolic protein TERM 2442 2154536 - 2154552 + g 72 -10.1 -2.80016 | overlap 2154533 CCCCGCTGCGATAGC CGCGCGA AAG TCGTGCG TCATTCCTAATGACA pckA 2156696 - 2155143 - | phosphoenolpyruvate carboxykinase [ATP] TERM 2443 2156561 - 2156545 - G 70 -3.7 -4.77165 | TCTTTGACAATAAAA CGATC TTTCGGC GATCG ACCCGTGCGTTTCCC algH 2156791 - 2157375 + | transcriptional regulator CBUD_2194 2157368 - 2157793 + | hypothetical cytosolic protein pyrB 2157786 - 2158718 + | aspartate carbamoyltransferase