TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.326352 %AT, 5928956 nt, 43010 terms. Intergenic: 0.39805 %AT, H2T: 588019 nt, 5519 terms; T2T: 146610 nt, 2969 terms; H2H: 190765 nt, 3648 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|160895450|ref|NC_010002.1| Delftia acidovorans SPH-1, complete genome (length 6767514) Daci_0001 16 - 1422 + | chromosomal replication initiator protein DnaA Daci_0002 1544 - 2662 + | DNA polymerase III, beta subunit Daci_0003 2865 - 5444 + | DNA gyrase, B subunit TERM 1 5583 - 5551 - T 80 -11.4 -3.80858 | gap 1 CAACAGCAACGCAAA GCCCGGG-ATCAG CATGCCCC CTGATACCCGGGC ACCAGCGCATCGCCA Daci_0004 6699 - 5770 - | LysR family transcriptional regulator TERM 2 6811 - 6821 + H 70 -3.2 -4.64766 | TTCATTGCAGGCAGT CGGA GTA TCTG TTTTTCAGATATCGC TERM 3 7687 - 7728 + G 72 -5.7 -4.36127 | opp_overlap 7676, overlap 7676 7706 AGCACGGCATCGAAG TTGCAGGTTTTGCCGGTGC GGCT GCGCCGGCGCAGCCTTGAG TTTTCCGTTCTTCCC Daci_0005 6915 - 7727 + | hypothetical protein TERM 4 7706 - 7723 + F 76 -12.7 -3.39352 | overlap 7687 AGGTTTTGCCGGTGC GGCTGCG CCGG CGCAGCC TTGAGTTTTCCGTTC Daci_0006 7781 - 8029 + | hypothetical protein TERM 5 8417 - 8396 - g 70 -12.9 -3.30441 | CACCATGGGCGACAA GGCCGCCGC GCGC GCCGCGGCC ATGAAGGCCGGCGTG Daci_0007 8040 - 9437 + | acetyl-CoA carboxylase, biotin carboxylase Daci_0008 9434 - 10345 + | allophanate hydrolase subunit 1 Daci_0009 10335 - 11312 + | urea amidolyase related protein Daci_0010 12595 - 11432 - | L-carnitine dehydratase/bile acid-inducible protein F TERM 6 12151 - 12185 + g 86 -6.2 -4.87665 | opp_overlap 12151 CCGTGACCGAGATCA GGCCGGCTACCGCCTG GAT CAGCAGGTCGTAGGCC TTTTTGTCGCTGAGC Daci_0011 13610 - 12690 - | LysR family transcriptional regulator TERM 7 14639 - 14585 - g 83 -5.4 -4.82901 | gap 1, opp_overlap 14630, overlap 14615 CGGGCTGCAGAAAAA GGCCTACGACATGGGCCTGGTGCTG GAAAAG CAGCCCC-GCCCCCAGGCGCTGGCC GCCTTCCTCAAGCAG Daci_0012 13737 - 14708 + | hypothetical protein Daci_0013 14720 - 15184 + | dehydratase TERM 8 15245 - 15269 + G 73 -10 -3.85817 | gap 2, opp_overlap 15225, overlap 15245 CCCTCGCTTGGCTAC G-CCGGCG-CGG CAA CCGCCGCCGGGC TTTCTGACGAAAAAT Daci_0014 15195 - 15713 + | hypothetical protein Daci_0015 17290 - 15884 - | histidine kinase Daci_0016 18083 - 17295 - | two component transcriptional regulator Daci_0017 19651 - 18230 - | outer membrane efflux protein TERM 9 19520 - 19499 - G 77 -11.5 -3.95073 | overlap 19512 19513 CGCCACAGCCACAAA CAGGGCCCG ATAA CGGGCGCTG CCTGCAAAACCGGCG Daci_0018 22742 - 19638 - | CzcA family heavy metal efflux protein Daci_0019 23912 - 22764 - | RND family efflux transporter MFP subunit TERM 10 24063 - 24097 + H 76 -6.4 -4.56597 | gap 2 CGTACCTGGGCCGGC GCCCGGGGCTGCTCCC CGGCA GGGATC-GCCT-GGGC TTTTTCGAGAACCAG TERM 11 24334 - 24316 - H 78 -4.5 -4.77157 | overlap 24317 24331 24332 TGAATCCATGAAAAA CCCGTTG CAAAT CAACGGT GAATGGCGACAATCA TERM 12 24612 - 24600 - g 79 -4.7 -4.80882 | opp_overlap 24600 24600 24601, overlap 24601 ACGGCATACGAAAAA CGCGC TTT GTGCG CTGTATTTCATAAGA Daci_0020 24333 - 24644 + | hypothetical protein TERM 13 24697 - 24673 - f 91 -13.7 -3.89881 | opp_overlap 24677 ACGAATCTTTATAAA CAGATGGACCA AGA TGATCCATCTG GTCAAAACACGCCGA Daci_0021 24810 - 26888 + | ATP-dependent DNA helicase DinG TERM 14 26931 - 26918 - T 70 -3.8 -4.652 | AAAGCATGCGAAAAA CAGG CTGCGC CCTG TCGCCACTGCATTCC TERM 15 27000 - 27041 + T 76 -13.1 -3.35597 | opp_overlap 26990, overlap 26997 AATCAGCGAGCCTGC CGATTGCCCACAGGC CACTTGCACACA GCCTGTGGGCAACCG TATTTCCCGGCTCCC TERM 16 27954 - 27964 + T 88 -3.2 -5.46129 | CTATCCACAGTTTTG TGCG AGG TGCA TTTTTTCCTTTATTG TERM 17 28074 - 28091 + T 70 -3.3 -4.72272 | overlap 28059 28075 GGTCTGGCAGTGCTG TGACCTG TTGA CAGGCCG TTTTTCCTGACGAAC TERM 18 28162 - 28150 - T 70 -4.7 -4.56597 | opp_overlap 28150 TGCCGCTGTGAAAAA CCGCC CTT GGCTG TTATTCCTATCTCTC TERM 19 28426 - 28408 - T 100 -13.2 -5.67063 | opp_overlap 28410 CTGAGGACAAAAAAA GACCACCT CTA AGGTGGTC TTGCCGGGATCCGCA Daci_0022 29111 - 28449 - | hypothetical protein TERM 20 29235 - 29192 - R 100 -12.4 -5.1675 | gap 1 GGAGTCAGCAAAAAA GCCCTTGCACTGTCGGC-TGC CTG ACAAGGCGTCCGTGCAAGGGC TGGCGCGAGCAATCC Daci_0023 29841 - 29287 - | hypothetical protein TERM 21 30022 - 30054 + H 100 -12.6 -5.65678 | opp_overlap 30018 30021, overlap 30025 30027 GGCATGCACAATGAC CGGGCGGGGCGCCA AGGCA TGGCGCCCCTGCTG TTTTTTCTGTTTTCT TERM 22 30025 - 30052 + H 100 -14.9 -4.42512 | gap 1, opp_overlap 30018 30021, overlap 30022 30027 ATGCACAATGACCGG GC-GGGGCGCCA AGGCA TGGCGCCCCTGC TGTTTTTTCTGTTTT TERM 23 30027 - 30049 + H 85 -16.3 -3.13161 | opp_overlap 30018 30021, overlap 30025 30022 GCACAATGACCGGGC GGGGCGCCA AGGCA TGGCGCCCC TGCTGTTTTTTCTGT Daci_0024 30152 - 31207 + | recombination associated protein Daci_0025 32455 - 31268 - | beta-ketothiolase Daci_0026 33343 - 32555 - | enoyl-CoA hydratase/isomerase Daci_0027 35188 - 33353 - | AMP-dependent synthetase and ligase Daci_0028 36152 - 35334 - | ABC transporter related Daci_0029 37359 - 36178 - | extracellular ligand-binding receptor Daci_0030 38434 - 37397 - | inner-membrane translocator TERM 24 37442 - 37427 - G 71 -11.8 -3.64487 | opp_overlap 37424 37423 CCACAGGTGGAAGAA GCGGCG CAGG CGCCGC CACATTTGTGCGAGC TERM 25 38384 - 38409 + g 70 -8.3 -3.91084 | gap 1, overlap 38384 38387 TTGCGTGCGGGAGTC G-TACAGCGCCG CAT CGGCGATGTAGC TTTCCTTGAGGGTGC Daci_0031 39338 - 38457 - | inner-membrane translocator TERM 26 38778 - 38768 - G 72 -4.6 -4.42653 | opp_overlap 38768 AGGCCAGCGAGAAAA CGCG CGG CACG TTGATGCCCACCGAA Daci_0032 40219 - 39335 - | ABC transporter related Daci_0033 40350 - 41120 + | TetR family transcriptional regulator Daci_0034 41581 - 41147 - | MerR family transcriptional regulator TERM 27 41318 - 41331 + g 75 -5.9 -4.46212 | GATGGCCTTGACCTG GCTGC TGGC GCGGC TTTTGTCCTGCCACA TERM 28 41428 - 41381 - G 75 -9 -4.18018 | gap 1 CTCGTCCATGGAAAA GCCGAGGTCGCGCCCCCGGCG GATGAAG CGCAGGGCGTGC-ACGTCGGC CTCGGCGTACTGGCG Daci_0035 41820 - 41626 - | heavy metal transport/detoxification protein TERM 29 41696 - 41720 + g 71 -2.8 -4.66163 | gap 1, overlap 41699 GCGCTGCTGTCGACT TCCA-CGCGCT GGGC GGCGCGATCGA TTTTTACCTGGGCCT Daci_0036 42121 - 43824 + | methyl-accepting chemotaxis sensory transducer TERM 30 43907 - 43887 - T 100 -16.9 -5.7946 | opp_overlap 43887 GTCTGAATAAAAAAA GCGGAGTGC GAT GCACTCCGC TTTTTGTTTGTGCGG TERM 31 43887 - 43907 + T 100 -16.9 -5.38054 | opp_overlap 43887 GTCTGAATAAAAAAA GCGGAGTGC GAT GCACTCCGC TTTTTGTTTGTGCGG Daci_0037 45048 - 43930 - | NADH:flavin oxidoreductase/NADH oxidase TERM 32 44082 - 44092 + g 72 -8.2 -4.07568 | opp_overlap 44081, overlap 44071 CGAAGGCCACGATAT CGGC GTG GCCG TTTTCCACGGCGCGC TERM 33 44364 - 44399 + g 79 -18.3 -2.52464 | gap 1, overlap 44394 ACAGGCGGATGCCCA CGCG-GCCGCCGCCCA CGGCA TCGGCGGCGGCGCGCG TGCATTCGAGCAGCA TERM 34 45100 - 45079 - R 100 -15.1 -4.4078 | GTGCGTGAAGCAAAA GCGCCACCC GTGC GGGCGGCGC GGCGTACGGCACAGA Daci_0038 45711 - 45130 - | NADPH-dependent FMN reductase Daci_0039 46690 - 45716 - | hypothetical protein Daci_0040 47342 - 46791 - | glyoxalase/bleomycin resistance protein/dioxygenase Daci_0041 47741 - 47355 - | NIPSNAP family protein Daci_0042 48510 - 47755 - | short-chain dehydrogenase/reductase SDR TERM 35 47833 - 47887 + g 100 -15 -4.84359 | gap 3 GGCGCAGGCGAGGAT GGCCTGCGC-CACATCGCCGGGCT-CG ACCA CGCGGCCCAGCGGCGTGTGCGC-GGCC TTTTTCTCCAGCTCC Daci_0043 48625 - 49398 + | IclR family transcriptional regulator TERM 36 49433 - 49394 - T 100 -26.6 -4.11216 | opp_overlap 49399, overlap 49420 TCCGCACGCGCAAAA GATAAGGGGCCGGCTGGT CCAC ACCAGCCGGCCCCTTGTC GGCCCCTTGTGCCGC TERM 37 49399 - 49428 + T 100 -25.1 -3.30338 | opp_overlap 49394 49420 ACGCGCAAAAGATAA GGGGCCGGCTGGT CCAC ACCAGCCGGCCCC TTGTCGGCCCCTTGT TERM 38 49442 - 49469 + T 72 -11.2 -3.33696 | overlap 49445 CCTTGTCGGCCCCTT GTGCCGCCGAGC CCGG GCTCGGCGCTGC TTACTTGAGCAGGCC Daci_0044 50120 - 49470 - | glutathione S-transferase domain-containing protein Daci_0045 50761 - 50174 - | NADPH-dependent FMN reductase Daci_0046 51062 - 53041 + | tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA Daci_0047 53038 - 53697 + | methyltransferase GidB TERM 39 54244 - 54274 + G 78 -9.6 -4.21811 | CCTGCTCACGTTCGC GGTGATGGCGGCCA CGG TGGCCGCGCTGACC TTTCTCTATTGCCTG Daci_0048 53804 - 54418 + | lysine exporter protein LysE/YggA TERM 40 54492 - 54464 - g 70 -4.3 -4.4078 | overlap 54465 TGTCGCCAATCAAAA GGGCGGGGTCGGC AAG ACCACCACCGCCG TCAACCTTGCAGCGG Daci_0049 54432 - 55202 + | cobyrinic acid ac-diamide synthase Daci_0050 55374 - 55934 + | hypothetical protein Daci_0051 55948 - 56883 + | parB-like partition protein Daci_0052 57079 - 58113 + | peptidoglycan binding domain-containing protein TERM 41 58387 - 58412 + G 100 -16.1 -4.14633 | overlap 58392 TGCAATCGACCCTAG GGCCGCTGGCC GCCT GGCTGGCGGCC TGTTTTTTGGGCGTG TERM 42 58392 - 58414 + G 100 -11.9 -5.03715 | overlap 58387 TCGACCCTAGGGCCG CTGGCCGCC TGGCT GGCGGCCTG TTTTTTGGGCGTGCT TERM 43 58435 - 58481 + G 85 -16.5 -3.64599 | gap 1, overlap 58476 TGGGCGTGCTCGCCA GCCTGCTGGCCACGCCCTGGTG GCGG CGCCTGGCCGTGGC-GGCGGGC TTTCCGCTGTCCTGC Daci_0053 58302 - 59123 + | methyltransferase type 12 Daci_0054 59484 - 59137 - | cytochrome c, class I Daci_0055 60824 - 59571 - | oxidoreductase molybdopterin binding TERM 44 60914 - 60943 + r 87 -9.9 -4.30719 | overlap 60910 60911 TGGGGCAGGGGTGCC CAGGGCCTTGCTG GCCA CGGCCAGGGCCTG TTTCTTCTGGGCCAC Daci_0056 61483 - 60896 - | hypothetical protein TERM 45 61307 - 61289 - G 71 -11.6 -3.59979 | overlap 61291 CGGGCGCATGGCAAA CACGGCCG TGG CGGCCGAG CTGCCCACCAGCAGC TERM 46 61305 - 61291 - G 70 -12.8 -3.38046 | overlap 61289 GGCGCATGGCAAACA CGGCCG TGG CGGCCG AGCTGCCCACCAGCA Daci_0057 62070 - 61480 - | ECF subfamily RNA polymerase sigma-24 factor Daci_0058 63056 - 62127 - | AraC family transcriptional regulator Daci_0059 63263 - 64516 + | major facilitator transporter TERM 47 64566 - 64539 - f 100 -22.8 -3.28712 | opp_overlap 64539 TCTCGCTCCCCACAA GGCCCCGCAAGC CAAG GCTTGCGGGGCC TTTGCTTTGGGCGGT TERM 48 64539 - 64566 + F 100 -22.8 -4.06055 | opp_overlap 64539 TCTCGCTCCCCACAA GGCCCCGCAAGC CAAG GCTTGCGGGGCC TTTGCTTTGGGCGGT Daci_0060 64674 - 65963 + | glutamate carboxypeptidase TERM 49 66005 - 66028 + T 73 -10.2 -3.66178 | gap 1, overlap 66008 TCCGCTGCCCCTGGC CGGGCGCCCCC CGA GGGGGC-CGCG TTTCGCCTTGGGGCG TERM 50 66120 - 66099 - T 100 -15.9 -5.54079 | GCAAAAAGCAAAAAA GGGCATGCC TTGC GGCATGCCC TGAAGGCGCATCGTG Daci_0061 67153 - 66152 - | hypothetical protein Daci_0062 68433 - 67225 - | L-carnitine dehydratase/bile acid-inducible protein F Daci_0063 68563 - 69468 + | LysR family transcriptional regulator Daci_0064 70882 - 69458 - | FAD linked oxidase domain-containing protein TERM 51 70259 - 70284 + g 72 -3.9 -4.63218 | gap 1, overlap 70256 70259 GCTGCCCACGATCAG GC-GCGTGAGGT CGT ATCCCGCGCTGC TTTTCTTGGCGCGCG TERM 52 70753 - 70700 - G 100 -20.2 -3.53012 | gap 1, opp_overlap 70702 70705, overlap 70702 70703 70705 CGTGCTTTCGGCAAA GACCACGGCCGCAGGCGGGGGCGCC TGGAT GGCGCCCTCGTC-GCGGCCGTGCTG TTCGCGCACCGCCAA TERM 53 70751 - 70702 - G 100 -22.8 -3.34398 | gap 1, opp_overlap 70702 70705, overlap 70700 70703 70705 TGCTTTCGGCAAAGA CCACGGCCGCAGGCGGGGGCGCC TGGAT GGCGCCCTCGTC-GCGGCCGTGC TGTTCGCGCACCGCC TERM 54 70702 - 70751 + g 100 -27.2 -3.01712 | gap 1, opp_overlap 70702 70700 70703 70705, overlap 70705 TGCTTTCGGCAAAGA CCACGGCCGCAGGCGGGGGCGCC TGGAT GGCGCCCTCGTC-GCGGCCGTGC TGTTCGCGCACCGCC TERM 55 70750 - 70703 - G 95 -26.3 -2.60496 | gap 1, opp_overlap 70702 70705, overlap 70702 70700 70705 GCTTTCGGCAAAGAC CACGGCCGCAGGCGGGGGCGCC TGGAT GGCGCCCTCGTC-GCGGCCGTG CTGTTCGCGCACCGC TERM 56 70705 - 70748 + g 95 -27.5 -2.73875 | gap 1, opp_overlap 70703 70702 70700 70705, overlap 70702 TTTCGGCAAAGACCA CGGCCGCAGGCGGGGGCGCC TGGAT GGCGCCCTCGTC-GCGGCCG TGCTGTTCGCGCACC TERM 57 70748 - 70705 - G 89 -23.1 -2.84325 | gap 1, opp_overlap 70705 70702, overlap 70703 70702 70700 TTTCGGCAAAGACCA CGGCCGCAGGCGGGGGCGCC TGGAT GGCGCCCTCGTC-GCGGCCG TGCTGTTCGCGCACC Daci_0065 71333 - 70965 - | signal transduction protein Daci_0066 71515 - 72087 + | ATP--cobalamin adenosyltransferase Daci_0067 72141 - 73046 + | LysR family transcriptional regulator TERM 58 73286 - 73303 + G 84 -5.5 -5.00616 | GCTCTTGCCTTTGCC GGTGGGC TGGC GCTCATC TTTTTTGCCGAACCA Daci_0068 73214 - 74146 + | hypothetical protein Daci_0069 76071 - 74836 - | D-amino-acid dehydrogenase TERM 59 75833 - 75799 - G 73 -10.5 -3.86346 | opp_overlap 75824 GCAGGCGCCCAGAAA GCGCAGTCCCCAGGC CCATT GCGCGGGGTCGGCGC GCAGGCGGAAGGCCA Daci_0070 76294 - 77175 + | extracellular solute-binding protein Daci_0071 77190 - 77951 + | aspartate racemase Daci_0072 79264 - 77945 - | benzoyl-CoA oxygenase/reductase, BoxA protein Daci_0073 80718 - 79291 - | benzoyl-CoA oxygenase component B Daci_0074 82427 - 80757 - | enoyl-CoA hydratase TERM 60 82515 - 82532 + r 100 -11.3 -4.75472 | opp_overlap 82515 AAATGCACGCAACAA CACGCAC GATA GTGCGTG TTTTGTTGATATCCA TERM 61 82532 - 82515 - R 77 -11.3 -3.69684 | opp_overlap 82515 AAATGCACGCAACAA CACGCAC GATA GTGCGTG TTTTGTTGATATCCA TERM 62 82597 - 82579 - R 100 -11 -5.44119 | TGCAGGCGAAAAAAA TCCAGGCC TGG GACCTGGA TGCCGTGGGTTGCTG Daci_0075 83535 - 82621 - | anaerobic benzoate catabolism transcriptional regulator TERM 63 83508 - 83492 - G 72 -13.7 -3.12351 | GCTTCTGAGAGGGAA TCCGCCG CCC CGGCGGA CTGGGCTGCCGTCTC Daci_0076 83710 - 85266 + | benzoate-CoA ligase family Daci_0077 85325 - 86488 + | extracellular ligand-binding receptor TERM 64 86910 - 86934 + G 79 -15 -3.35679 | CGTGCATGGCGTGCC GCTGCCCGGC TGGCT GTCGGGCAGC TTCTCGCTGGGCGGG Daci_0078 86539 - 87411 + | inner-membrane translocator TERM 65 88123 - 88161 + G 100 -11.7 -4.72986 | gap 1, opp_overlap 88117 GGGTACAAGCTCGCG GCCT-TCGTGCTGGCCGG CATG CTGGCCGGCGTGGCAGGC TTTTTGCTGGCGGTG Daci_0079 87415 - 88500 + | inner-membrane translocator Daci_0080 88493 - 89251 + | ABC transporter related TERM 66 89850 - 89840 - g 79 -2.4 -4.91109 | CCGCGACTACAAAAA GGTC CTG GCCC ACACCGACCGCGCCG Daci_0081 89244 - 89957 + | ABC transporter related Daci_0082 90835 - 89990 - | hypothetical protein Daci_0083 91446 - 90832 - | hypothetical protein Daci_0084 92027 - 91554 - | thioesterase superfamily protein TERM 67 92056 - 92076 + r 72 -12.5 -3.09516 | opp_overlap 92057, overlap 92059 TGGGTGCAACGAAAA AGACGGCCC CGG GGGCCGTCC TTGCATGCTACGCCA TERM 68 92075 - 92057 - R 100 -16 -4.8622 | opp_overlap 92056 92059 GGGTGCAACGAAAAA GACGGCCC CGG GGGCCGTC CTTGCATGCTACGCC Daci_0085 93680 - 92166 - | succinate CoA transferase TERM 69 93778 - 93752 - R 100 -8.7 -5.81032 | gap 1, opp_overlap 93752 CAAGCCTAAAAAAAA CCGCCCCATGCA AGAA CGCA-AGGGCGG TATATCTCCGGAAAC Daci_0086 95195 - 93888 - | uracil-xanthine permease Daci_0087 95340 - 97454 + | acetoacetyl-CoA synthetase TERM 70 97685 - 97637 - g 70 -13 -3.32844 | gap 1 TCGCCCAGGCCATAA GCGGCCT-GCCGCCCCATGTGCG TGCG CGCTCCTGGGGCGGCTACAGCGC CGAACTGAGCCGGCA Daci_0088 97543 - 98700 + | acyl-CoA dehydrogenase domain-containing protein Daci_0089 98869 - 99897 + | acyl-CoA dehydrogenase domain-containing protein Daci_0090 99921 - 100709 + | enoyl-CoA hydratase TERM 71 100716 - 100747 + F 81 -15.8 -2.87132 | gap 1, opp_overlap 100688 TTTCAGTGACCGGGC CCGCCCG-GCCCCCG CCA CGGGGGCATGGGCCG TGTGTGACACAACAC Daci_0091 100809 - 101624 + | septum site-determining protein MinC TERM 72 102451 - 102423 - g 85 -11.7 -4.25104 | CCTGGGCGAGGAAAA GCCCATGCGCTTC ACC GAAGCGCAAAAGC CCGGCTTCTTCAAAC Daci_0092 101674 - 102486 + | septum site-determining protein MinD Daci_0093 102493 - 102756 + | cell division topological specificity factor MinE TERM 73 102762 - 102782 + T 90 -18.3 -3.17212 | CTCGCGCTGAGCGCT GCCACGGCC TGG GGCCGTGGC TTCATGCAATCCTGA Daci_0094 104047 - 102986 - | amino acid permease-associated region TERM 74 104466 - 104420 - R 86 -13.7 -3.55444 | opp_overlap 104415 CCGTCATTGGTGAAA TGGCTGCCGCATCCACAGGCT TCATC AGCCTGTGGATGGGTCTGCGA TCAGATGTATAAGCC Daci_0096 105105 - 104602 - | flavin reductase domain-containing protein TERM 75 105284 - 105329 + r 74 -11.7 -3.50853 | gap 1 TCTTTGCCCTGTGTG CGCGGCGCCGGCTCACA-GCGC CAT GCTCATCTGGGCGGGCGCGGCG TTCTCGTTCAGCCAG Daci_0097 105931 - 105296 - | DNA polymerase III, epsilon subunit Daci_0098 106476 - 105976 - | MarR family transcriptional regulator Daci_0099 107372 - 106551 - | 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase Daci_0100 108845 - 107391 - | succinic semialdehyde dehydrogenase Daci_0101 109724 - 108891 - | 2-oxo-hepta-3-ene-1,7-dioic acid hydratase TERM 76 109004 - 108981 - G 70 -15.3 -2.70932 | GGGGCGCGTGAACGA GCCGGCCAG CACGGT CTGGCCGGC CTCCAGGGCCTCGCC TERM 77 109687 - 109648 - G 70 -9.3 -3.86194 | gap 2, overlap 109649 AAGCGCTTGGAGAAA TGCTCGACCTGCACGCGCG TCTT CTCGC-TGC-GGTCGAGCT CCTGGGCCAGTTGGG Daci_0102 110160 - 109726 - | 5-carboxymethyl-2-hydroxymuconate isomerase Daci_0103 110979 - 110161 - | extradiol ring-cleavage dioxygenase class III protein subunit B Daci_0104 111307 - 110981 - | extradiol ring-cleavage dioxygenase LigAB LigA subunit Daci_0105 112320 - 111328 - | hypothetical protein TERM 78 112081 - 112093 + g 71 -10.5 -3.7941 | CACGCCGATCACCGT GCCCG CGC CGGGC TTGTTCTCCACGATC Daci_0106 113823 - 112366 - | 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase Daci_0107 114613 - 113852 - | 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase,HpaG2 subunit Daci_0108 115290 - 114610 - | 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, HpaG1 subunit TERM 79 115409 - 115382 - R 100 -18.4 -4.7254 | AGGCCGCAGCAAAAA GCCCCTGCGCGG CGAA CCGTGCAGGGGC TTGAAGGGGGTACCG Daci_0109 119141 - 115464 - | fibronectin type III domain-containing protein TERM 80 116344 - 116370 + g 78 -5.7 -4.56597 | gap 1, opp_overlap 116339, overlap 116338 ACGGTAGATAGCGCC GGCACCGCCAGG CTGT CCAGGCGC-GCC TTTTTCCAGGCGGCA TERM 81 118158 - 118140 - G 76 -13.8 -3.50393 | GGCCACGCCATAGAA CACGCCGC CCT GCGGCGCG GCGATGGACTCGGCC TERM 82 119269 - 119246 - R 100 -18.2 -5.08824 | opp_overlap 119246 CTGCCATGCAAAAAA GACGGCTCCC GCGC GGGAGCCGTC TTTGGTTCATTGCGC TERM 83 119246 - 119269 + r 100 -18.2 -4.00348 | opp_overlap 119246 CTGCCATGCAAAAAA GACGGCTCCC GCGC GGGAGCCGTC TTTGGTTCATTGCGC TERM 84 119286 - 119303 + r 80 -4.1 -5.01535 | overlap 119281 TTGGTTCATTGCGCC GTGAAGC CTGC GCTTTGC TTTTTCTGGTTATGG Daci_0110 119767 - 119345 - | UspA domain-containing protein Daci_0111 120730 - 119831 - | metallophosphoesterase TERM 85 120100 - 120086 - G 73 -7 -4.17657 | overlap 120087 GAGCACATTGCAAAA GCCGGC CGT GCCGGG CACCAGGCCATAGCG TERM 86 120201 - 120177 - G 76 -13.5 -3.53012 | opp_overlap 120176 GTGGGGCCGTCGAAA GGCCGGGCCAG CGC CTGGCGCAGCC ATTGCTGGCAGACCA Daci_0112 121738 - 120779 - | LysR family transcriptional regulator Daci_0113 121880 - 122299 + | hypothetical protein TERM 87 122338 - 122359 + T 100 -9.4 -5.60689 | gap 1, opp_overlap 122338 CGCTCCTCCAAAAAA GCCGCTGCC CACAA GGC-GCGGC TTTTTTGTTGTCTGG TERM 88 122359 - 122338 - T 100 -10.1 -5.00616 | gap 1, opp_overlap 122338 CGCTCCTCCAAAAAA GCCGCTGCCC ACA AGGC-GCGGC TTTTTTGTTGTCTGG TERM 89 122401 - 122417 + T 100 -13.7 -4.66609 | opp_overlap 122401 AAACGCCACAAAAAA GCCTCGC AGT GCGAGGC TTTTTCCATGGGCTG TERM 90 122417 - 122401 - T 100 -13.7 -5.28826 | opp_overlap 122401 AAACGCCACAAAAAA GCCTCGC AGT GCGAGGC TTTTTCCATGGGCTG Daci_0114 124306 - 122441 - | phosphoenolpyruvate carboxykinase TERM 91 124384 - 124333 - R 100 -10.8 -5.15969 | opp_overlap 124332 124346 124358 CTTCAATTGAAAAAA CCAGTTTTTCAAAGGGGACGCGCC TGTT GCCGCGCCAACTTTGAGAAACGGG CTCTCGTTCAGTCGG TERM 92 124612 - 124582 - R 85 -16.2 -3.1855 | opp_overlap 124589, overlap 124589 CTGCCGAACAGGCAA GCAAAAAGCCCCGC AGG GCGGGGCTTTTGAC GGGGGAAGGCAAGGC TERM 93 124589 - 124605 + r 95 -15.1 -4.07568 | opp_overlap 124582 124589 ACAGGCAAGCAAAAA GCCCCGC AGG GCGGGGC TTTTGACGGGGGAAG TERM 94 124605 - 124589 - R 100 -15.1 -4.89009 | opp_overlap 124589, overlap 124582 ACAGGCAAGCAAAAA GCCCCGC AGG GCGGGGC TTTTGACGGGGGAAG Daci_0115 124784 - 124632 - | hypothetical protein Daci_0116 126122 - 124875 - | threonine dehydratase Daci_0117 126210 - 127238 + | AraC family transcriptional regulator Daci_0118 127377 - 128489 + | FAD-binding 9 siderophore-interacting domain-containing protein Daci_0119 130031 - 128511 - | AMP-dependent synthetase and ligase TERM 95 129355 - 129331 - G 71 -9.9 -3.72695 | ACGGCCTGCAGGAAA TGCTGCGGGTG GTA CTCGCGCAGCA GCACCACGGTGCCGC Daci_0120 131771 - 130077 - | acyl-CoA dehydrogenase domain-containing protein TERM 96 131398 - 131386 - G 75 -4.8 -4.65895 | opp_overlap 131389, overlap 131387 CCGTGCAGGTAAAAA CCTG CGGCC CAGG CGCTCCAGCGGCCCG Daci_0121 131868 - 132476 + | TetR family transcriptional regulator Daci_0122 133696 - 132518 - | histidine kinase TERM 97 132702 - 132751 + g 72 -13.4 -3.13475 | gap 2 GCGCGCAGCTCGCTG GGCAG-GCCGGGGCCG-GCATCGC TGAT GCGCAGCACGGCCCAGGCACGGCC TTCGATATCGGATTC Daci_0123 134406 - 133681 - | two component transcriptional regulator Daci_0124 135544 - 134540 - | fimbrial protein TERM 98 135249 - 135270 + g 88 -14.5 -3.76125 | CCCAGACTGGGGATG GCGGTGGAA TATA TTCCACCGC TTTCCGTTCCAATGC TERM 99 135681 - 135666 - g 83 -9 -4.64861 | CGTTCTGAAAATAAA CTCGGA ATCA TCCGAG TCCACAGTGATCGGG TERM 100 135920 - 135956 + G 85 -17.1 -3.21099 | CGACGCATCGCCTCT CCAGCCTGTGCCTGGGC GCC GCCCTGGCGCTGGCCGG TTGCTCCTCGCCGCC TERM 101 136183 - 136216 + G 74 -14.5 -3.01924 | gap 1, opp_overlap 136177 CGCCAGCAACGGCTG CTGGCCGGCACGGCCG GCT CGGCCTT-CCGGCCCG TGTTCACGGCCGGTG Daci_0125 135577 - 137361 + | RND efflux system outer membrane lipoprotein Daci_0126 137358 - 138512 + | hypothetical protein TERM 102 139065 - 139025 - g 90 -14 -4.07568 | gap 1, opp_overlap 139023 139025 GTCGGGCGGCGAAAA GCAGCGCGT-GGCCATCGC CCGC GCCATGGCCAAGGCGCCGC AGCTGCTGTTTGCCG Daci_0127 138528 - 139286 + | ABC transporter related TERM 103 139445 - 139426 - g 85 -11.4 -4.2679 | gap 1 CAAGGCGCAGCAAAA CGGCC-CGG CGT CCGTGGCCG TGGCGCGCGGCAAGA TERM 104 139665 - 139645 - g 70 -12.5 -3.29461 | overlap 139649 CAAGGCCCGCCAGAA GGCACGCGC CGC GCGCCTGCC CCAGCTCAAGCAGAC TERM 105 139707 - 139649 - g 73 -16.2 -2.59431 | gap 4, overlap 139645 139680 GCCCGCCAGAAGGCA CGCGCCGCGCGCCTGCCCCAGCTCAAGCAG ACC CTG-TCGCGCTGG--CAGGC-CGCAGCGCG CGAAGGCGCCGCCGA Daci_0128 139283 - 140227 + | secretion protein HlyD family protein Daci_0129 140220 - 140924 + | 2,3-diketo-5-methylthio-1-phosphopentane phosphatase Daci_0130 140921 - 141862 + | alpha/beta hydrolase fold Daci_0131 141852 - 142220 + | hypothetical protein TERM 106 142535 - 142561 + G 81 -4.2 -4.9218 | CAGCCCTGGATCTAT GGCGCCTTCGTG GGC TACATCGGCGCC TTTTTCTCGTGGATG Daci_0132 142385 - 142879 + | hypothetical protein Daci_0133 142872 - 144098 + | DegT/DnrJ/EryC1/StrS aminotransferase Daci_0134 145383 - 144061 - | cyclopropane-fatty-acyl-phospholipid synthase TERM 107 144324 - 144307 - G 75 -8.4 -4.10657 | CCACATGCGGCAAAA GCGCTC GTCGTA GAGCGC GGCGGCCTCGTCGCG Daci_0135 146372 - 145461 - | hypothetical protein Daci_0136 147427 - 146354 - | hypothetical protein TERM 108 147280 - 147262 - G 91 -12.4 -4.5442 | CGGGCAACGACAAAA GACGCGCC TTG AGCGCGTC GTCCGCCGTGGTCAG Daci_0137 149063 - 147435 - | aminotransferase class-III TERM 109 148966 - 148944 - G 78 -6.4 -4.6468 | opp_overlap 148947, overlap 148948 GTAAATGAGACAAAA CAAATGATAA TCA TTATCAATTG ATGGGAGAATCACGG TERM 110 148962 - 148948 - G 86 -5.8 -4.84146 | opp_overlap 148947, overlap 148944 ATGAGACAAAACAAA TGATAA TCA TTATCA ATTGATGGGAGAATC Daci_0138 149086 - 151518 + | TonB-dependent hemoglobin/transferrin/lactoferrin family receptor Daci_0139 151691 - 152179 + | hypothetical protein Daci_0140 152186 - 152995 + | hypothetical protein TERM 111 153043 - 153018 - T 78 -7.5 -4.72272 | gap 1, opp_overlap 153018 CGGTTTCACGAAAAA GGCCTGC-CGCC ATG GAGGTGCAGGCC TTTTCTCATGGTGAA TERM 112 153018 - 153043 + T 84 -9 -4.4891 | gap 1, opp_overlap 153018 CGGTTTCACGAAAAA GGCCTGCCGCC ATGGA GGT-GCAGGCC TTTTCTCATGGTGAA Daci_0141 155129 - 153096 - | ATP-dependent DNA helicase RecQ TERM 113 153122 - 153144 + g 71 -11.2 -3.61715 | overlap 153123 CCACCACCCGCAGCA CCTCGGCGCC ATA GGCGTCGAGC TTCTTGGCGCCCATG TERM 114 153123 - 153143 + g 70 -14.7 -2.76815 | overlap 153122 CACCACCCGCAGCAC CTCGGCGCC ATA GGCGTCGAG CTTCTTGGCGCCCAT TERM 115 154024 - 154057 + g 74 -10.9 -3.80573 | gap 1, overlap 154025 TAGGCCATCCAGGCA TCGG-CGGGCAGCCCG TCG CGGCCTGCGCGGCCGG TTTCCTGGTAGTAGC TERM 116 155124 - 155096 - G 91 -8.8 -5.00616 | gap 1, opp_overlap 155111 155112, overlap 155097 155098 GCTTCCCGCAAAAAA TGC-GCTGCGGCC CGGA GGCCGCAACAGCC GCCATTTTGCGCCCC TERM 117 155123 - 155097 - G 74 -12.3 -3.60048 | gap 1, opp_overlap 155111 155112, overlap 155096 155098 CTTCCCGCAAAAAAT GC-GCTGCGGCC CGGA GGCCGCAACAGC CGCCATTTTGCGCCC Daci_0142 156399 - 155248 - | acyl-CoA dehydrogenase domain-containing protein Daci_0143 157651 - 156410 - | L-carnitine dehydratase/bile acid-inducible protein F Daci_0144 157746 - 158636 + | LysR family transcriptional regulator Daci_0145 158911 - 159885 + | substrate-binding region of ABC-type glycine betaine transport system Daci_0146 159898 - 160788 + | binding-protein-dependent transport systems inner membrane component Daci_0147 160788 - 161567 + | ABC transporter related Daci_0148 161577 - 162365 + | histidine utilization repressor Daci_0149 162479 - 164050 + | histidine ammonia-lyase Daci_0150 164090 - 165823 + | urocanate hydratase TERM 118 165936 - 165894 - g 71 -11.2 -3.61715 | gap 1, opp_overlap 165919, overlap 165872 CAGCCCCTGGAAGAA CGGGGGCGG-CAGCACGCG CGAGAT CGCCTGCTGGCCGCCCGGG GCGGGCATGGAGGCT TERM 119 165919 - 165950 + G 71 -10.8 -3.60098 | gap 1, opp_overlap 165894 AGCACGCGCGAGATC GCCTGC-TGGCCGCC CGG GGCGGGCATGGAGGC TTTCGGCTGGCGCAT Daci_0151 165829 - 166407 + | hypothetical protein Daci_0152 166437 - 167732 + | imidazolonepropionase Daci_0153 167743 - 169131 + | FAD linked oxidase domain-containing protein Daci_0154 169128 - 170273 + | histidinol-phosphate aminotransferase TERM 120 171603 - 171634 + G 70 -9.4 -3.85698 | gap 1 GCGTGCAGGCCGGCC GGCATGCGCTGCACG AGG CG-GCAGCCCATGGC TTTGTCGCGGCCCGC Daci_0155 170270 - 171670 + | N-formimino-L-glutamate deiminase TERM 121 172520 - 172481 - g 78 -15.9 -3.06815 | opp_overlap 172480 AGCGCGCCGAACAGA TCCAGC-CCACGCTGCAGC GCAT GCTGCAG-GCGGTGCTGGA CTTCGTCACGACACG Daci_0156 171685 - 172548 + | N-formylglutamate amidohydrolase Daci_0157 173052 - 172549 - | MerR family transcriptional regulator TERM 122 173010 - 172975 - G 93 -13.2 -4.11692 | CAGCGACTCGTAAAA GCGCAGCGCCGAGG CCTTGACC CCGCTGCGCTGCGC CACGTCGCCGATGCT TERM 123 173377 - 173392 + G 72 -6 -4.34263 | overlap 173374 173374 CTTCTCGGCCCTGCT GGCCCG CGGC CAGGCC TTTGTCTTCTTCAGC Daci_0158 173156 - 173659 + | hypothetical protein TERM 124 174381 - 174365 - g 73 -7.9 -4.14243 | CACCGCACTGCAAAA GCTGTCC GAG GGACTGC GCATACAGACCGTGG Daci_0159 173691 - 174524 + | AraC family transcriptional regulator Daci_0160 176521 - 174545 - | RNA-directed DNA polymerase TERM 125 175240 - 175257 + g 74 -12.7 -3.54424 | overlap 175249 CGCGGTGCAGGGCGG CGCGCAG GCGC CTGCGCG TTTCGCGCGATACGC TERM 126 176251 - 176267 + g 73 -7.9 -4.1899 | overlap 176252 176263 GGCGTTTGGTTTCCT CGCGCTG GGC CAGCGCC TTTTGCATGCGCTCC TERM 127 176772 - 176754 - R 76 -12.4 -3.3334 | AACGGCAGTTCACAA GGGTGGCG AAA CACCACCC GGATTGCAAGAGCCT Daci_0161 178556 - 176829 - | zinc finger SWIM domain-containing protein Daci_0162 181731 - 178588 - | hypothetical protein TERM 128 179998 - 179977 - G 72 -5.1 -4.3898 | gap 1, overlap 179979 179980 179982 ACCATCGGCATAAAA CA-GCAGGGC CAG GCCCTGGGTG CGCGAGCTGGCGGCC TERM 129 181376 - 181335 - G 78 -13.7 -3.56643 | gap 1, opp_overlap 181365 TGCACAGGGCGGAAA TGGCGCC-GGCCTGCAGG GCCGACT CCGGCAGGCCTGGCGGCA CCGTGGCCTGTCCCG Daci_0163 182181 - 183395 + | RND family efflux transporter MFP subunit TERM 130 185076 - 185118 + G 72 -13.4 -3.15544 | gap 1, overlap 185069 GGTCTATGCGGCGCT GCTGGCGGGCACGGCCGTG CTGTTC CA-GGCCGTGCCGGGCGGC TTCATCCCGCTGCAG Daci_0164 183409 - 186603 + | hydrophobe/amphiphile efflux-1 (HAE1) family protein Daci_0165 186596 - 188029 + | RND efflux system outer membrane lipoprotein TERM 131 188053 - 188073 + F 100 -14 -5.55769 | opp_overlap 188053 CGCGCATTGCCACAA GGGACGGC CAGGC GCCGTCCC TTTTTTCTTGTCCGG TERM 132 188073 - 188053 - f 81 -14 -3.31144 | opp_overlap 188053 CGCGCATTGCCACAA GGGACGGC CAGGC GCCGTCCC TTTTTTCTTGTCCGG TERM 133 189241 - 189218 - g 78 -16.7 -3.00022 | GCTACGGCATACAGA CGGCGGCCG GCGCCT CGGCCGCCG CGGCCGCACTGCTGA Daci_0166 188179 - 189336 + | FAD dependent oxidoreductase Daci_0167 189398 - 190483 + | hypothetical protein Daci_0168 190537 - 191220 + | XRE family transcriptional regulator TERM 134 191362 - 191392 + F 78 -4.6 -4.83169 | gap 1, overlap 191363 GTGCGCTAGTTTCAT AGGTC-GCGCCTC TTGTTT GGGGCGCAGGCCG TTTTTCTGGGGGAAT Daci_0169 191412 - 192518 + | homocysteine S-methyltransferase TERM 135 193428 - 193480 + G 79 -11.8 -4.07885 | gap 2, overlap 193449 CTGGGCCCAGGCGCA GGGCGCGGCCATGGCGCTGGCGGCCG CAT CGGCTTCC-GCGCCGGGTGCG-GCCC TTTTCACGGCGGCTG TERM 136 193897 - 193919 + G 75 -4.6 -4.56775 | GGCTGCCAGTACGAG GGCCGCGCAC CCT GCGCCCAGCC TTTTTGCAGCGAGAT Daci_0170 192541 - 193977 + | putative Fe-S oxidoreductase TERM 137 194019 - 194055 + F 70 -12.1 -2.87051 | opp_overlap 194019 194016, overlap 194018 ACGCTACGAAACTGA CCGGGCCTGACGGTGGC GTG GCCATCGCCGGCCCCAG CTTTCATAATGCCGG Daci_0171 194297 - 195295 + | porin Daci_0172 196948 - 195296 - | methyl-accepting chemotaxis sensory transducer TERM 138 196362 - 196348 - G 81 -10 -4.26076 | CCAGCCCCAGCAAAA TGCTGG CTC CCAGCA GGCCGACCACCCAGA TERM 139 197080 - 197063 - R 74 -3.3 -4.80455 | gap 1, overlap 197066 CAGCGAAAGAGAAAA CGAGGCCC GCA GTGCC-CG CTCAGGGGGGGAACC TERM 140 197458 - 197485 + r 79 -12.6 -3.54424 | TTGCAGGCCCGCAGC CCAGCCATCCGC GTCT GCGGACGGCCGG TTTCAAGGCATCGGA Daci_0173 198844 - 197543 - | L-carnitine dehydratase/bile acid-inducible protein F TERM 141 198665 - 198677 + g 72 -6.2 -4.29325 | GTGGCGCGTGTCGTC GCCC TCGCC GGGC TTTTCGATCTTGATC Daci_0174 199007 - 199921 + | LysR family transcriptional regulator Daci_0175 200386 - 199958 - | thioesterase superfamily protein Daci_0176 201540 - 200383 - | acyl-CoA dehydrogenase domain-containing protein Daci_0177 202774 - 201563 - | thiolase Daci_0178 203175 - 202771 - | hypothetical protein Daci_0179 203540 - 204772 + | formamidase Daci_0180 204790 - 205143 + | FmdB family regulatory protein TERM 142 205348 - 205386 + G 74 -16.6 -2.70932 | CGTCGCAGCGCCGCC GCCTGCTGTCCGCCGGCG GCG CGCTGGCTGCCAGCAGCC TGCTTCCCGCAGCCC Daci_0181 205290 - 206315 + | hypothetical protein Daci_0182 206462 - 207703 + | extracellular ligand-binding receptor Daci_0183 207700 - 208830 + | alcohol dehydrogenase Daci_0184 210336 - 208894 - | amidase Daci_0185 211478 - 210507 - | hypothetical protein TERM 143 211817 - 211787 - R 76 -10.4 -3.76125 | overlap 211788 GCAGGGCAAGGCAAA GGTTGCACCGGC AGCGGTG GCCGGCGCAACT GCTGGGCGGCCCGGG TERM 144 211816 - 211788 - R 75 -13.9 -2.85354 | overlap 211787 CAGGGCAAGGCAAAG GTTGCACCGGC AGCGGTG GCCGGCGCAAC TGCTGGGCGGCCCGG Daci_0186 213345 - 211834 - | AMP-dependent synthetase and ligase TERM 145 212040 - 212014 - G 70 -8.6 -3.87815 | CTGCAGCTCGACAAA GGCGATGACCTC CTC GTTGCCATCGCC CTCGGGCCGCCCGAC Daci_0187 214358 - 213360 - | hypothetical protein TERM 146 214418 - 214384 - R 73 -9.1 -3.93166 | overlap 214388 CCTGCAAAAAATGAA TGAAGCGCTGCCGTG GCCTG CACGGCGGCGCGCCC GGTCTGCGCCGGACA TERM 147 214414 - 214388 - R 90 -15.1 -3.59867 | overlap 214384 CAAAAAATGAATGAA GCGCTGCCGTG GCCTG CACGGCGGCGC GCCCGGTCTGCGCCG Daci_0188 215578 - 214514 - | LysR family transcriptional regulator TERM 148 216395 - 216430 + G 83 -14.6 -3.65902 | opp_overlap 216373 216370 GAGCGGCTGTGCCGC GCGCTGGACCTGCCGC ACTG GCTGCAGGACGAGCGC TTTGCCTCCAATGCG Daci_0189 215624 - 216832 + | L-carnitine dehydratase/bile acid-inducible protein F Daci_0190 216889 - 217908 + | alcohol dehydrogenase Daci_0191 217905 - 218912 + | hypothetical protein Daci_0192 220358 - 219150 - | acetyl-CoA acetyltransferase TERM 149 220425 - 220403 - R 87 -10.5 -4.30844 | opp_overlap 220417 220424, overlap 220404 AGTGGATCAGGAAAA GGCTGCGCC GCATT GGCGCAGCA GGGTGTGTGCCTGTT TERM 150 220424 - 220404 - R 78 -14 -3.18024 | opp_overlap 220417, overlap 220403 GTGGATCAGGAAAAG GCTGCGCC GCATT GGCGCAGC AGGGTGTGTGCCTGT Daci_0193 221695 - 220394 - | acetyl-CoA hydrolase/transferase TERM 151 220797 - 220771 - G 77 -18 -2.52896 | CCACCGCCGAATTGA TGGCGGCCAGCC TGT GGCTGGCGGCCA GCACCTCGGGATCGT TERM 152 221109 - 221153 + g 82 -17.7 -3.04144 | TGGCCGGCAATGGCC TGCTCGGCAGGGCCGGGCGCG CTG CGCGCCTGGTCCAGCGGAGGG TGTTCGGCATCGACC Daci_0194 222489 - 221692 - | enoyl-CoA hydratase/isomerase TERM 153 222534 - 222515 - R 77 -15 -2.72344 | GGGCAGGGGGAAGGA GCGGCCTC TTGC GAGGCCGC CGTGCATCAGGCGAG Daci_0195 223488 - 222541 - | 3-alpha,7-alpha,12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoAhydratase TERM 154 223333 - 223300 - G 79 -3 -4.82901 | gap 1, overlap 223302 CCCTTCGTAGAAAAA GGGCAGGGCGTCGGC GCACA GCGGAT-CGCTGCCC AGGCCCAGGCTCAAT TERM 155 223518 - 223491 - R 80 -9.8 -4.11371 | gap 1, overlap 223492 CAACAGCCTTCAAAA CCGGCGCACCCCA ACC CAGGG-GCGCCGA GCAAGAGCCGCCTCG TERM 156 223567 - 223525 - R 78 -14.1 -3.13403 | gap 1, overlap 223523 GGGCGCCGAGCAAGA GCCGCCTCGCGGCGAGGGCG CCGT CCCCCTC-CCGCGAAGCGAG AGAGGGGGAAGCGGC Daci_0196 224610 - 223606 - | short-chain dehydrogenase/reductase SDR TERM 157 224984 - 224994 + G 70 -8.2 -3.86015 | opp_overlap 224957, overlap 224980 CCGACGGCCACCCGC GCCG TGG CGGC TTTCTGCCGCCCGTG Daci_0197 224731 - 225636 + | hypothetical protein TERM 158 225632 - 225622 - f 71 -6.8 -4.15833 | ACCATGACCGGAAAA GCCA CCC TGGC CTGAGACCCCTGAAC Daci_0198 225667 - 226833 + | acyl-CoA dehydrogenase domain-containing protein TERM 159 227144 - 227197 + G 71 -11.7 -3.54741 | gap 3, opp_overlap 227140, overlap 227143 CTGGTGCAGAACCTG GCGCCCGGCGCGGCCGCGCGCATGGG CCTGT CCTACGCG-GCG-CTGCG-CGAGCGC TTTCCGCGCCTCATC Daci_0199 226844 - 228046 + | L-carnitine dehydratase/bile acid-inducible protein F TERM 160 228059 - 228036 - f 70 -4.4 -4.57569 | overlap 228037 228038 228049 228052 CGACCCCGGGAAAAA CCGCCCCCTG AAAC CAGGGCGCAT GCCCAAGAATGCGCC TERM 161 228472 - 228449 - g 72 -14.6 -2.87132 | gap 1, overlap 228452 TGGCCGTGGCACAGA GCATCGGCGCC AGC GGCGCCGA-GC TCATGGCCGCCTGCG TERM 162 228470 - 228452 - g 74 -16 -2.69151 | overlap 228449 CCGTGGCACAGAGCA TCGGCGCC AGC GGCGCCGA GCTCATGGCCGCCTG Daci_0200 228088 - 229452 + | MmgE/PrpD family protein Daci_0201 229556 - 230563 + | hypothetical protein Daci_0202 230587 - 231459 + | HpcH/HpaI aldolase TERM 163 231756 - 231807 + G 73 -12.9 -3.53012 | gap 3, opp_overlap 231735 CCAGGCGCTGGCCCT GGCGGCCGGCGCC-GCG-GC-GGCAG GGC CCGCCAGCGTGCTGGCGCAGGCCGGC TTTGCCACGCGGCCC Daci_0203 231646 - 232713 + | hypothetical protein Daci_0204 232852 - 233397 + | hypothetical protein TERM 164 233401 - 233388 - T 71 -5.9 -4.42238 | opp_overlap 233388 CGAGGCCAAGGAAAA GCGGC TCTG ACCGC TTGAGTGAAAAGGAA TERM 165 233413 - 233435 + T 81 -14.2 -3.28712 | opp_overlap 233413 233418 233419, overlap 233418 CCGCTTGAGTGAAAA GGAAAGCGCG GCA TGCGCTTTCC TTGTGCGCGCCGCGA TERM 166 233435 - 233413 - T 100 -13.5 -4.18018 | opp_overlap 233413 233418, overlap 233418 233419 CCGCTTGAGTGAAAA GGAAAGCGC GGCAT GCGCTTTCC TTGTGCGCGCCGCGA TERM 167 233438 - 233475 + T 76 -14.1 -3.02511 | gap 1, opp_overlap 233419 233464 GCATGCGCTTTCCTT GTGCGCGCCGCGATCTGG GGG CAAGACC-CGGCGCGCGC TATTGGGCAGATGGG Daci_0205 234017 - 233475 - | hypothetical protein Daci_0206 234460 - 234050 - | hypothetical protein Daci_0207 234981 - 234499 - | thioesterase superfamily protein Daci_0208 235985 - 234978 - | hypothetical protein Daci_0209 237562 - 235982 - | AMP-dependent synthetase and ligase Daci_0210 238560 - 237592 - | hypothetical protein TERM 168 238612 - 238598 - R 95 -11.4 -4.614 | opp_overlap 238598 CGCAACGATAGAAAA CCCTGG GCC CCAGGG CACCAGGGTTTGACT TERM 169 238598 - 238620 + r 77 -11.3 -3.65351 | gap 1, opp_overlap 238598 CGCAACGATAGAAAA CCCTGG-GCC CCAG GGCACCAGGG TTTGACTGGAGATCC TERM 170 238712 - 238735 + r 84 -9.6 -4.57569 | opp_overlap 238717, overlap 238717 AAGGCGGCCACAAGA AAAAAGGCGC CGAA GCGCCTTTTC TTTTTCGCAGAATGC TERM 171 238717 - 238730 + r 100 -9.5 -5.26119 | opp_overlap 238717, overlap 238712 GGCCACAAGAAAAAA GGCGC CGAA GCGCC TTTTCTTTTTCGCAG TERM 172 238730 - 238717 - R 100 -9.5 -5.55769 | opp_overlap 238717 238712 GGCCACAAGAAAAAA GGCGC CGAA GCGCC TTTTCTTTTTCGCAG Daci_0211 240185 - 238881 - | Glu/Leu/Phe/Val dehydrogenase Daci_0212 240362 - 241180 + | hypothetical protein Daci_0213 242077 - 241205 - | hypothetical protein Daci_0214 242519 - 242106 - | hypothetical protein Daci_0215 244165 - 242516 - | putative hemagglutinin-related transmembrane protein Daci_0216 245229 - 244318 - | LysR family transcriptional regulator TERM 173 245342 - 245327 - g 90 -7.5 -5.07275 | GCAGACACACAAAAA GGGCC TCCAGG GGCCC AAGCGCAAAGTGGTC Daci_0217 245304 - 245798 + | transmembrane pair domain-containing protein Daci_0218 246790 - 245771 - | two component LuxR family transcriptional regulator Daci_0219 250283 - 246783 - | histidine kinase Daci_0220 250498 - 251763 + | urea ABC transporter, urea binding protein Daci_0221 251874 - 252788 + | urea ABC transporter, permease protein UrtB Daci_0222 252860 - 254050 + | urea ABC transporter, permease protein UrtC Daci_0223 254070 - 254813 + | urea ABC transporter, ATP-binding protein UrtD Daci_0224 254834 - 255523 + | urea ABC transporter, ATP-binding protein UrtE TERM 174 256246 - 256264 + G 71 -11.6 -3.64487 | opp_overlap 256241, overlap 256248 CGACATCAAGGACCT CTCGCGCG GCT CGCGCGTG TTCTTCCCCGTCTAC TERM 175 256248 - 256262 + G 73 -12.8 -3.40052 | opp_overlap 256241, overlap 256246 ACATCAAGGACCTCT CGCGCG GCT CGCGCG TGTTCTTCCCCGTCT Daci_0225 255560 - 256789 + | formamidase Daci_0226 256836 - 257195 + | FmdB family regulatory protein TERM 176 257249 - 257219 - T 91 -19.8 -3.14132 | opp_overlap 257226, overlap 257222 257226 CCTGCGCCGCACCAA TGACAAAGGCCCGC GAT GCGGGCCTTTGTCC TGCCTGGGCGTACCG TERM 177 257246 - 257222 - T 95 -20.1 -2.77899 | opp_overlap 257226, overlap 257219 257226 GCGCCGCACCAATGA CAAAGGCCCGC GAT GCGGGCCTTTG TCCTGCCTGGGCGTA TERM 178 257226 - 257242 + T 93 -15.1 -3.97947 | opp_overlap 257226 257222 257219 CGCACCAATGACAAA GGCCCGC GAT GCGGGCC TTTGTCCTGCCTGGG TERM 179 257242 - 257226 - T 95 -15.1 -4.08144 | opp_overlap 257226, overlap 257222 257219 CGCACCAATGACAAA GGCCCGC GAT GCGGGCC TTTGTCCTGCCTGGG Daci_0227 258012 - 257266 - | ABC transporter related TERM 180 257648 - 257658 + g 81 -2.4 -5.01732 | overlap 257636 TGGCGCGCCAGCGCC GCCG CCT CGGG TTTTTTCACGCCCTT Daci_0228 258652 - 257999 - | polar amino acid ABC transporter, inner membrane subunit Daci_0229 259377 - 258649 - | polar amino acid ABC transporter, inner membrane subunit TERM 181 258995 - 259031 + g 70 -15.2 -2.80816 | gap 2, opp_overlap 258978 GCCCAGCGGCCCATG CCCAGCGCG-CCAGC-GG CTT CCAGCTGGCCGCGCTGCG TCTCCTGGATGCCGG Daci_0230 260215 - 259409 - | extracellular solute-binding protein Daci_0231 261018 - 260212 - | GntR domain-containing protein TERM 182 260287 - 260326 + g 74 -13.4 -3.30771 | CGCAGATGTATCGGG CGCCGTTGCGTCGGGCGC CGTC GCGTCGGACGCCGCCGCG TTGTCCGGCGTGTCG TERM 183 261164 - 261195 + H 70 -12.2 -2.84602 | gap 1, opp_overlap 261133 261158 261157 261172, overlap 261172 261189 ATCGACAATCCGCCC CGAAGGCAGCGCCGG CGG CCCGCGCTGCCG-CG CTTTGGTGCAGTGCC TERM 184 261172 - 261196 + H 80 -11.4 -3.74693 | gap 1, opp_overlap 261158 261157 261172, overlap 261164 261189 TCCGCCCCGAAGGCA GCGCCGGCGGC CCGC GCTGCCG-CGC TTTGGTGCAGTGCCG Daci_0232 261450 - 264206 + | methionine synthase TERM 185 264227 - 264250 + T 74 -3.1 -4.80396 | gap 1, overlap 264219 264229 264247 GGTTGACCGCTGGCT TGGCTACGCC GGTCA GGCGT-GCGA TTTTTCGCTATTTTG Daci_0233 264733 - 264389 - | hypothetical protein Daci_0234 265268 - 264762 - | hypothetical protein TERM 186 264940 - 264930 - G 71 -2.4 -4.55689 | overlap 264931 ATCATGCAGATAAAA GCCG CTG CGGA CGGGGTTGCAAGCGA TERM 187 265567 - 265547 - R 100 -12.6 -5.45726 | opp_overlap 265550 CAGAGTCCAAAAAAA CAAGGCGC ACGAG GCGCCTTG TCATGGGTCAGCGGG Daci_0235 266950 - 265592 - | glycerophosphoryl diester phosphodiesterase Daci_0236 267793 - 267107 - | GntR family transcriptional regulator Daci_0237 269133 - 267790 - | C4-dicarboxylate transporter DctA Daci_0238 270765 - 269452 - | major facilitator transporter TERM 188 270922 - 270866 - g 77 -15 -3.12351 | CTTCGCCATATGCAA TGCCTATGCCATGGCCTGCGTCGTCC ACGAA GGGCGGCGCAGGCCATGGCGCAGATG GAACCACATGACTAC Daci_0239 270807 - 272093 + | acetylornithine deacetylase TERM 189 272185 - 272203 + G 73 -7.3 -4.1891 | overlap 272184 ACAATTGCCAGGTAC GGCGCGC CCGCC GCGCCCC TTTGTCTTCACCGAA TERM 190 272406 - 272348 - g 73 -16.7 -2.63549 | overlap 272347 272345 CAGGCCGAAGAAGAG GCCGGCGAAGCCGCCGCTGGCGACG-GCA TCG TGCGCGACGCCAACGGCAA-TGCGCTGGC CGACGGCGATGCCGT Daci_0240 272174 - 272587 + | alkylphosphonate utilization operon protein PhnA Daci_0241 272590 - 273621 + | hypothetical protein Daci_0242 274253 - 273618 - | pseudouridine synthase Daci_0243 275166 - 274258 - | LysR family transcriptional regulator Daci_0244 275243 - 275716 + | LrgA family protein Daci_0245 275722 - 276414 + | LrgB family protein TERM 191 276609 - 276656 + F 77 -7.6 -4.3255 | gap 1, overlap 276642 TTTTTTGCCCCTGCC GGGTGGTTGTTTTTCGAGGCCGG GTC TCGGCC-CGGCAGCCGACTGCCC TTTCTTGATTCGCCA TERM 192 276850 - 276825 - f 78 -14.1 -3.25223 | gap 1 GAGTCAGATGACGAA GCAGTCCTGTCC TTC GG-CAGGACTGC AACCCCGCAACCGCC Daci_0246 277305 - 277619 + | hypothetical protein TERM 193 277698 - 277683 - T 100 -9 -4.8622 | opp_overlap 277683 CCGCCCAATGAAAAA GCACCT CGAA AGGTGC TTTTTTCTCGTCAGC TERM 194 277683 - 277698 + T 100 -9 -5.31275 | opp_overlap 277683 CCGCCCAATGAAAAA GCACCT CGAA AGGTGC TTTTTTCTCGTCAGC Daci_0247 279172 - 277724 - | aldehyde dehydrogenase TERM 195 279035 - 279017 - G 71 -11.6 -3.55444 | overlap 279018 GCTCCAGGCGGGAAA GGCCGCGG CTG CCGCGGCG ATGGCGGCTTCCACA TERM 196 279034 - 279018 - G 70 -15.1 -2.73124 | overlap 279017 CTCCAGGCGGGAAAG GCCGCGG CTG CCGCGGC GATGGCGGCTTCCAC Daci_0248 280546 - 279209 - | glucarate dehydratase TERM 197 280625 - 280588 - R 84 -5.3 -5.00616 | gap 1, overlap 280590 GTCTCTGGGAAAAAA CGGCTATGCGGC-GGCGG TGG CCGCCTGCTGCGCGGCGG ACCATGGCACCTCGG Daci_0249 281577 - 280591 - | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding TERM 198 281379 - 281338 - G 71 -10.8 -3.54424 | gap 1, overlap 281362 GTCCAGCGCGTCAAA GCCCACGCCGAAGCTGCTC ACGAA GCGCAGCCTGGGCA-GGGC CTGCACCACGCTCGC TERM 199 281645 - 281625 - R 89 -12.5 -4.08064 | opp_overlap 281644, overlap 281626 AAGCCCCGGTGAAAA GGGCCTGCG GTG CGCAGGCCA GCGGGAACGGCCCTG TERM 200 281644 - 281626 - R 83 -16 -3.04517 | overlap 281625 AGCCCCGGTGAAAAG GGCCTGCG GTG CGCAGGCC AGCGGGAACGGCCCT TERM 201 281644 - 281674 + r 82 -11.1 -3.92869 | gap 1, opp_overlap 281625, overlap 281647 281669 CTGCGGTGCGCAGGC CAGCGGGAACGGCC CTGG GGCCGG-CCCGTTG TTTCTAGCTCAATCA TERM 202 281647 - 281671 + r 76 -9.2 -4.09117 | gap 1, overlap 281644 281669 CGGTGCGCAGGCCAG CGGGAACGGCC CTGG GGCCGG-CCCG TTGTTTCTAGCTCAA Daci_0250 282642 - 281683 - | hypothetical protein TERM 203 282658 - 282690 + r 72 -13.3 -2.57654 | overlap 282657 282656 282660 282664 GTTCTTGTCTCCTGG GGGGCGCAAGGGCCG GAC TGGCCCCTGCGTCCG GTCTTGTGGCTTATT Daci_0251 283612 - 282701 - | 5-dehydro-4-deoxyglucarate dehydratase Daci_0252 284636 - 283659 - | hypothetical protein TERM 204 284779 - 284754 - R 74 -11.1 -3.53343 | overlap 284755 284770 284771 AATTCCCGTGGCAAA GCCATGGGCCC CGAA AGGCCCATGGG GGCACTCAGGCGGCG TERM 205 284778 - 284755 - R 77 -14.6 -2.71791 | overlap 284754 284770 284771 ATTCCCGTGGCAAAG CCATGGGCCC CGAA AGGCCCATGG GGGCACTCAGGCGGC Daci_0253 285573 - 284785 - | GntR domain-containing protein TERM 206 286098 - 286117 + G 70 -12.8 -3.31461 | ACCTGCTGGGCGGCG CGGCGCGC GACA GCGTGCCG TTCTCGGCCTACCTG Daci_0254 285656 - 286972 + | mandelate racemase/muconate lactonizing protein Daci_0255 287023 - 288021 + | hypothetical protein TERM 207 289063 - 289088 + G 75 -9 -4.10453 | gap 1 GCGATGCGTTCAGCG GCGTCACGGCC AACCC GGCCGTGG-GC TTTTGCACCGATTTG Daci_0256 288195 - 289760 + | galactarate dehydratase TERM 208 289799 - 289821 + G 73 -10.4 -3.85698 | overlap 289797 CCCATTGCCATTCCG GCGGCGCCGC CAC GCGCCGCAGC TTTGTGGCGGGCGCG TERM 209 290007 - 290032 + G 71 -11.1 -3.6543 | overlap 290005 290010 GGTCGAGGGGCCGGT GTGGGTGGCGG ACGG CCGCTACCTGC TGTTTTCCGACATTC Daci_0257 289777 - 290829 + | gluconolactonase TERM 210 290916 - 290900 - g 70 -12.3 -3.28712 | TGCCGCTCTGCACAA TGAGGGC CAT GCCCTCA GATACCCCGGAAACT Daci_0258 290899 - 291894 + | ribonuclease BN TERM 211 291957 - 291920 - f 100 -23.5 -3.39449 | gap 1, opp_overlap 291920, overlap 291942 TTCGACGAAGATGAA CG-CCTGCGCCGCGGCCC GCA AAGCCGCGGCGCAGGGCG TTTGGGAGTGGAACA TERM 212 291920 - 291957 + F 100 -22.1 -3.57144 | gap 1, opp_overlap 291920 291942 TTCGACGAAGATGAA CGCC-TGCGCCGCGGC CCGCAAA GCCGCGGCGCAGGGCG TTTGGGAGTGGAACA TERM 213 292009 - 291984 - g 82 -13.2 -3.69734 | AACAATGCAGCGAAA GTCCCCGGGC ACCGAG GCCCGGGGCC AAGGACAACATGGAC TERM 214 292290 - 292319 + G 79 -14.9 -3.34715 | overlap 292288 ACACGCTGGAGCTGT CGGGCGCCGTGCG CGTG CTCACGCCGCCCG TGTTTGCCGAGCATG Daci_0259 291965 - 292957 + | LysR family transcriptional regulator Daci_0260 293194 - 294057 + | inner-membrane translocator Daci_0261 294058 - 295032 + | inner-membrane translocator Daci_0262 295019 - 295783 + | ABC transporter related Daci_0263 295770 - 296477 + | ABC transporter related Daci_0264 296655 - 297830 + | extracellular ligand-binding receptor Daci_0265 298209 - 297871 - | hypothetical protein TERM 215 298254 - 298271 + r 76 -5.5 -4.63218 | GAGTTTGTTTGCTCG GCCTTGG CATA CAAAGGC TTTTATTGAAACAAA TERM 216 298312 - 298283 - R 82 -12.9 -3.64822 | opp_overlap 298289, overlap 298289 AGGCTTTTATTGAAA CAAAAAGGAGCGC CTCG GCGCTCCTCTGTG GTCAGCGCGATGCGC TERM 217 298289 - 298306 + r 70 -12.7 -2.94099 | opp_overlap 298283 298289 TTATTGAAACAAAAA GGAGCGC CTCG GCGCTCC TCTGTGGTCAGCGCG TERM 218 298306 - 298289 - R 100 -12.7 -5.30616 | opp_overlap 298289, overlap 298283 TTATTGAAACAAAAA GGAGCGC CTCG GCGCTCC TCTGTGGTCAGCGCG Daci_0266 299102 - 298329 - | short-chain dehydrogenase/reductase SDR Daci_0267 300053 - 299247 - | IclR family transcriptional regulator Daci_0268 300871 - 300098 - | oxidoreductase FAD-binding subunit TERM 219 300846 - 300817 - G 78 -6.3 -4.5442 | overlap 300818 TGGTGAAGGAGAAAA GGCGGTCGGTCCA GTGG TGGACGGACAGCA CGCGTTCTTCAAGAA Daci_0269 302145 - 301132 - | LysR family transcriptional regulator Daci_0270 302161 - 302952 + | short-chain dehydrogenase/reductase SDR Daci_0271 303251 - 302970 - | hypothetical protein TERM 220 303264 - 303316 + r 88 -19.7 -2.52464 | CATGCGCTGGTCTCC GCTGCGGCGGCCGCTGCCGTGGCGG CCA CTGCCGTGGCGGCTGCTGCAGTGGC TGCCTTGGGCGCGGG Daci_0272 304975 - 303248 - | PepSY-associated TM helix domain-containing protein Daci_0273 305298 - 304972 - | hypothetical protein Daci_0274 306303 - 305443 - | LysR family transcriptional regulator TERM 221 306303 - 306323 + H 84 -9.9 -4.16842 | GGTCAAGCGTCTCCA TACTTCAAT TTT ATTGAAGTA TTTATTGGGCATGCG Daci_0275 306334 - 307014 + | hypothetical protein TERM 222 307060 - 307101 + F 79 -13 -3.54459 | gap 2, overlap 307062 TCCTGCCTTTTCACT GTCCATGCCGCAGCGCGCCC CACG GGGCGCGC-GTGGAA-GGGC TTTGCCCGAAATTCC TERM 223 307062 - 307100 + F 77 -14.5 -2.72461 | gap 1, overlap 307060 CTGCCTTTTCACTGT CCATGCCGCAGCGCGCCC CACG GGGCGCGC-GTGGAAGGG CTTTGCCCGAAATTC TERM 224 307201 - 307179 - g 78 -9.8 -4.16943 | GCCCACACCCTAAAA TCCTGGCTGC ACG ACGGCCAGGA GATCGCGCTGCTCGA Daci_0276 307146 - 308717 + | rhodanese domain-containing protein Daci_0277 308911 - 309909 + | hypothetical protein TERM 225 311030 - 310984 - g 90 -16.7 -3.72576 | gap 2 GGGGCGGCTACGAAA GCCTGGCGACGGCCGCGCACATG GCG CATGCGCGCAGC-GTCACC-GAC TGGAGTGCGCGCGGG Daci_0278 309909 - 311126 + | cystathionine beta-lyase Daci_0279 312213 - 311140 - | 2-nitropropane dioxygenase NPD Daci_0280 313435 - 312248 - | major facilitator transporter TERM 226 313678 - 313665 - g 71 -2.3 -4.62069 | overlap 313666 GGCCCATGTGAAAAA GCTCG AGGA CGAGG CCGGCGTGCAACTGC Daci_0281 313552 - 314475 + | LysR family transcriptional regulator Daci_0282 315834 - 314479 - | HipA domain-containing protein Daci_0283 316141 - 315842 - | XRE family transcriptional regulator Daci_0284 317962 - 316313 - | Mg chelatase, subunit ChlI TERM 227 318033 - 318008 - R 100 -16.9 -3.67481 | gap 1, overlap 318004 CCAGACACAAAGGAA GAGGCCGCCAGC GGT GC-GGCGGCCTC GGTGACCCAGTATGG TERM 228 318136 - 318104 - R 76 -12.9 -3.39668 | CCCCAAATCTCAGAA TGTTCTGACCCTTGC GGC GCAAAAATCAGAACA GCTTCACCAGCGCCG Daci_0285 319511 - 318129 - | hypothetical protein TERM 229 319065 - 319095 + g 77 -14.6 -3.23692 | GTAGGCGATGAGGAG GGCGGCGGCCAGGA AGA TCCAGGGCGCCGTC TTGGTGATCATGCTG Daci_0286 319938 - 319513 - | hypothetical protein Daci_0287 321269 - 319980 - | hydroxymethylglutaryl-CoA reductase, degradative TERM 230 320402 - 320457 + g 74 -14.1 -3.28984 | gap 3, overlap 320395 CATAGGCATGGGCGC CGGCCTCGACCGCGCGCCAGTCGTTGCC CGT GGCCACGA-TGACG-G-GGTCGATGCCG TTCATGATTCCCTTG TERM 231 321451 - 321429 - g 79 -15.6 -3.30124 | opp_overlap 321446 CCCCATTGCCGAGAA GCTGGCCGAC CTG ATCGGCCAGC AGATCGCCGACGGCG Daci_0288 321388 - 322794 + | transcriptional regulator Daci_0289 323801 - 322782 - | LysR family transcriptional regulator TERM 232 323552 - 323499 - G 74 -12.1 -3.54459 | gap 1 CGAAGCCTCGGCAAA GCGCACCAGCTGCGCGCCCAGC-GCC GTG GGCCGCATGCCGCGCGGCAGGCGCTC GAAGAGCTGGCAGCC TERM 233 325086 - 325112 + G 72 -13.6 -3.16881 | opp_overlap 325078 GCCAACACGCTGGCC GGCGCTGCGGCC GCT GGCGGCATCGCC TTCATCAACTCCCTC Daci_0290 323988 - 325301 + | major facilitator transporter Daci_0291 325307 - 326518 + | mandelate racemase/muconate lactonizing protein Daci_0292 326530 - 327339 + | 2-dehydro-3-deoxyglucarate aldolase TERM 234 327543 - 327524 - g 77 -11.4 -3.85698 | gap 1 CGCGGCGCCCACAAA GCCTGGGCG CGC CGCCC-GGC CGTGGAGCGCGCGCA TERM 235 328364 - 328342 - g 79 -7.6 -4.45544 | overlap 328343 GCTGATCAACCAAAA GGGCCTGGAC AGC GTGCAGGCCA AGGTGCGCCAGGCCA Daci_0293 327356 - 328789 + | aldehyde dehydrogenase Daci_0294 329326 - 328811 - | MarR family transcriptional regulator TERM 236 329698 - 329644 - g 78 -12.1 -3.78934 | gap 2, overlap 329645 GGTCGTGGACAACAA GCCGGGCGCCAA-CG-GCAACATCGGC GCG GCCGAGGTCGCGCGCTCCGCGCCCGAT GGCTACACCTGGCTG TERM 237 329697 - 329645 - g 72 -15.6 -2.87146 | gap 2, overlap 329644 GTCGTGGACAACAAG CCGGGCGCCAA-CG-GCAACATCGGC GCG GCCGAGGTCGCGCGCTCCGCGCCCGA TGGCTACACCTGGCT Daci_0295 329429 - 330406 + | hypothetical protein TERM 238 331263 - 331253 - g 79 -2.4 -4.82901 | CGCGCTCGAGAAAAA GGGC ATG GCCG AGAACACGCTCATCG Daci_0296 330492 - 331820 + | sulfatase TERM 239 331880 - 331855 - T 100 -19.1 -4.36914 | opp_overlap 331855 331858 CTGTGGGCGATAAAA CAAGGCAGGCC TTTG GGCCTGCCTTG TTTCCTGATTACTGG TERM 240 331855 - 331880 + T 100 -19.1 -3.85704 | opp_overlap 331855, overlap 331858 CTGTGGGCGATAAAA CAAGGCAGGCC TTTG GGCCTGCCTTG TTTCCTGATTACTGG TERM 241 331858 - 331877 + T 95 -15 -4.04927 | opp_overlap 331855, overlap 331855 TGGGCGATAAAACAA GGCAGGCC TTTG GGCCTGCC TTGTTTCCTGATTAC Daci_0297 332752 - 331889 - | hypothetical protein TERM 242 333200 - 333219 + r 75 -7.9 -4.16016 | GGTTCAATTAATCGC CGCCAAA TATGCT TTTGGCG TTTGTTGAAGAATGA TERM 243 333301 - 333281 - R 71 -8.9 -3.79849 | overlap 333282 CAATCAGACCAACAA CGGCACCGC CTC GCGGTACCC ATAAAAAAGCCAGAA TERM 244 333300 - 333282 - R 70 -12.4 -2.87186 | overlap 333281 AATCAGACCAACAAC GGCACCGC CTC GCGGTACC CATAAAAAAGCCAGA Daci_0298 333899 - 333618 - | hypothetical protein TERM 245 333702 - 333712 + g 89 -4 -5.26158 | ATTTTCCATTTTTAT TTGA GAA TCAA TTTCTTTTTTATTTA Daci_0299 338526 - 333949 - | YD repeat-containing protein TERM 246 334341 - 334355 + g 72 -5.7 -4.27584 | CACCACTATGCCCAC CAAGC CATGT GCTTG TTTTACCTTCGGCGT Daci_0300 340989 - 338605 - | type VI secretion system Vgr family protein TERM 247 340378 - 340392 + g 72 -3.4 -4.57073 | overlap 340379 340380 GTGGATGTTTTCCTG ATCGCC TGC GGCGGC TTTTTCCGGGGGATA TERM 248 340699 - 340729 + g 70 -12.4 -3.31792 | GTCGCTCTTGCGCGT GGCCAGCCACAGCC AGG GGCTCAGGCGGGCC TTGTAGGCGTAGTGG TERM 249 340803 - 340834 + g 72 -3.6 -4.58395 | CGATGAAGCGCCTGC CGCCGCCCTGGG TTTCTATT TCTATGGTGGCG TTTTTACCCAATAGG TERM 250 341256 - 341272 + H 85 -7.3 -4.77036 | GATTGCAGTGTGATA TGCACTA TCT TGGTGCA TTTTTGATGATGCGC Daci_0301 341464 - 342195 + | hypothetical protein Daci_0302 342219 - 342557 + | nitrogen regulatory protein P-II Daci_0303 342589 - 343962 + | ammonium transporter TERM 251 343991 - 344014 + F 100 -16 -5.37593 | ATTTCATTGCGGATT GGCCTCGGTG CTTG CACCGGGGCC TTTTTTGCTTTGGAG Daci_0304 344041 - 345309 + | FAD linked oxidase domain-containing protein TERM 252 345409 - 345448 + G 90 -10.6 -4.77036 | opp_overlap 345394 CCGCACGCTGGGCCT GCTGCTGGCCTTCAACGC GGGT GCGGTGAATGCGGGCGGC TTTTTGCTGGTGCAC Daci_0305 345335 - 346117 + | hypothetical protein Daci_0306 346179 - 347429 + | glycolate oxidase iron-sulfur subunit TERM 253 347631 - 347590 - g 70 -12.8 -3.2756 | overlap 347586 347588 AACCGCAAGAACAGA GCGCCGCGCTGCCGGCGG ACGCCG CTGCCGGCACCGAGCCGC AGGCTGCAGCCAGCG Daci_0307 347514 - 348380 + | ProQ activator of osmoprotectant transporter ProP TERM 254 348450 - 348392 - f 79 -12.3 -3.46647 | overlap 348390 CTGAGGCACCAAAGA CCGGCAGCACCGCCTGCCG-GCACACTCC ACC GCCGCGTGCCCGGCAAGGGCCGC-GCCGG TGCACCTGCCCTGGA Daci_0308 348610 - 349188 + | AmiS/UreI transporter Daci_0309 350115 - 349216 - | hypothetical protein TERM 255 349392 - 349345 - G 82 -14.8 -3.53444 | gap 1, overlap 349326 349324 GGAGGCGCTGGCAAA CACCACCTCGGCCAGCATGACCA CGG CGGTCACGCCGGCCG-GCAGGCG CGCGGCGCCGAACTG TERM 256 350161 - 350130 - R 100 -15.2 -4.86773 | gap 1 TAAAACCACGAAAAA GTGCCCGGT-CAGGC AAA GCCCGCACCGGACAC AATACGAGAAGACCA Daci_0310 351615 - 350314 - | hypothetical protein Daci_0311 351750 - 352853 + | alanine racemase Daci_0312 353294 - 352854 - | MarR family transcriptional regulator TERM 257 353331 - 353315 - H 72 -10.9 -3.34398 | overlap 353313 GGTCTTGTGGAAATA CGTTGAC AAA GTCAACG GATGGCAGAGAATTG Daci_0313 353391 - 354203 + | FAD-binding 9 siderophore-interacting domain-containing protein TERM 258 354279 - 354222 - f 93 -11.6 -4.30995 | gap 2, opp_overlap 354232 354244, overlap 354233 354244 GCCTGGAGAAAAGAA CGGATAGCACAGACGAAAAAAAGCCCAC CGAA GTGGGCTTTTTTTCGTG-GTGGT-TGCG CGAGAAGGATTTGAA TERM 259 354232 - 354271 + F 77 -15.2 -2.70932 | opp_overlap 354222 354233 354244, overlap 354244 AAGAACGGATAGCAC AGACGAAAAAAAGCCCAC CGAA GTGGGCTTTTTTTCGTGG TGGTTGCGCGAGAAG TERM 260 354270 - 354233 - f 86 -18.7 -2.8779 | opp_overlap 354232 354244, overlap 354222 354244 AGAACGGATAGCACA GACGAAAAAAAGCCCAC CGAA GTGGGCTTTTTTTCGTG GTGGTTGCGCGAGAA TERM 261 354244 - 354259 + F 100 -10.4 -5.55664 | opp_overlap 354233 354222 354244, overlap 354232 CACAGACGAAAAAAA GCCCAC CGAA GTGGGC TTTTTTTCGTGGTGG TERM 262 354259 - 354244 - f 100 -10.4 -5.60864 | opp_overlap 354244 354232, overlap 354233 354222 CACAGACGAAAAAAA GCCCAC CGAA GTGGGC TTTTTTTCGTGGTGG TERM 263 354535 - 354584 + G 75 -16.9 -2.94099 | GCAATGCCTGCGGAG GCACCAGCCCGCGCTGGCTGGGC AAGT GCCCGGCCTGCGGGGCCTGGAAC TCTCTGATCGAGGCC Daci_0314 354447 - 355877 + | DNA repair protein RadA Daci_0315 355957 - 356394 + | hypothetical protein Daci_0316 356439 - 357377 + | branched-chain amino acid aminotransferase TERM 264 357613 - 357593 - g 71 -11.1 -3.54424 | CTGTACCGCCTGAAA GCCGGCGAA GTC TTCGCAGGC GGGCATTGAACAAAG Daci_0317 357413 - 357622 + | hypothetical protein TERM 265 357624 - 357647 + T 87 -16.8 -2.98823 | opp_overlap 357624 357628, overlap 357628 CAGGCGGGCATTGAA CAAAGCGGGC CTCG GCCCGCTTTG TGTGTCTCAGCGCGC TERM 266 357647 - 357624 - T 87 -16.8 -3.05596 | opp_overlap 357624 357628, overlap 357628 CAGGCGGGCATTGAA CAAAGCGGGC CTCG GCCCGCTTTG TGTGTCTCAGCGCGC TERM 267 357628 - 357643 + T 89 -11.8 -4.17296 | opp_overlap 357628 357624, overlap 357624 CGGGCATTGAACAAA GCGGGC CTCG GCCCGC TTTGTGTGTCTCAGC TERM 268 357643 - 357628 - T 89 -11.8 -4.20516 | opp_overlap 357624 357628, overlap 357624 CGGGCATTGAACAAA GCGGGC CTCG GCCCGC TTTGTGTGTCTCAGC Daci_0318 358598 - 357654 - | hypothetical protein TERM 269 358670 - 358703 + G 76 -7.4 -4.25104 | gap 1, overlap 358672 AGATTTGACAAGTCG AAGCTGCCAGGGCTC CTCAC GA-CCCTGGCCGCTA TTTTGGTGCCCGGGC TERM 270 358672 - 358701 + G 71 -10 -3.73042 | gap 1, overlap 358670 ATTTGACAAGTCGAA GCTGCCAGGGCTC CTCAC GA-CCCTGGCCGC TATTTTGGTGCCCGG Daci_0319 358652 - 359920 + | O-antigen polymerase Daci_0320 359917 - 361038 + | glycosyl transferase group 1 TERM 271 361279 - 361298 + G 81 -7.1 -4.62069 | opp_overlap 361264 361275 CCATGATCGAAGCGG CCACGGG CGACTA CCTGTGG TTTTTGGACTCCGAC TERM 272 361855 - 361865 + G 70 -8.2 -3.85698 | CGCGCAACCTCATCG GCGC CCT GCGC TTTCTCGACCGGCAG Daci_0321 361035 - 362063 + | glycosyl transferase family protein TERM 273 362109 - 362082 - g 72 -6.8 -4.35524 | opp_overlap 362102 GCCTGAAACTGAAAA CCCGGGGCGAGC TGTG GCTGGCGGCGGG CATGCGCCGCTTCTA Daci_0322 362060 - 363013 + | mannosyltransferase OCH1-related enzyme Daci_0323 363455 - 363036 - | hypothetical protein Daci_0324 364815 - 363427 - | major facilitator transporter TERM 274 363607 - 363595 - GH 85 -6.9 -4.7871 | overlap 363597 AACCATCAGGAAAAA CGCGG CGC CCACG CTGAAGGCCATCTGC TERM 275 364939 - 364972 + G 71 -11.7 -3.62096 | opp_overlap 364918 364921 364919 CCATGCACACGCTGC TCCACCGCGCGCAGA CGTT TCTGGCCGTGGTGGA TTTCGGCTCGTACAC Daci_0325 364905 - 365816 + | LysR family transcriptional regulator TERM 276 366051 - 366082 + F 76 -5.8 -4.5954 | opp_overlap 366045 TTCTAACCACCACGC CCACCTGTTGTG CGTAGAAA CTCAACCGGTGG TTTTCTGTGATCTCG TERM 277 366226 - 366208 - g 100 -14.6 -4.59109 | GACATCCCGCAAAAA CACTGCCG GCG CGGCAGTG CAGGCGCAGCCGTTG Daci_0326 366191 - 366628 + | hypothetical protein Daci_0327 367870 - 366644 - | histidine kinase TERM 278 367547 - 367502 - G 90 -13.2 -4.08939 | gap 1, overlap 367526 CAACAGCCACAGAAA GCCGAAGGGCGGGCGCAGCCA GAAGG CGGCTGCGCC-GTCGTGCGGC GGGCGGTCGCCGCGC TERM 279 367577 - 367526 - G 87 -17.2 -3.35679 | overlap 367502 CGGGCGCAGCCAGAA GGCGGCTGCG-CCGTCGTGCGGCG GGCGGT CGCCGCGCGGCGGGCGCGG-CGCC ATGTGCAGCATGTAG Daci_0328 368636 - 367878 - | two component transcriptional regulator Daci_0329 370177 - 368741 - | major facilitator transporter TERM 280 368900 - 368867 - G 81 -12.3 -3.92075 | overlap 368879 ATGCGCATCGACAAA GGCGCCCGAGAAGCC GGCC AGCCACTTGGGCGCC AGCAGCATCATGGAG TERM 281 369837 - 369787 - G 70 -14.5 -2.73875 | gap 1, overlap 369784 TCTGCGCGAACAGCA GCCAGCCGC-GCCGCCGCCCCAGC CAGC GCGTGAGCAGCGGCAGCGGCATGC GGTCCACCAGCGGCG TERM 282 370020 - 369987 - G 71 -2.4 -4.56775 | gap 2, overlap 369988 369991 AGGCCTGCCGAAAAA CCCAG--GGCCAGCAT GCGC AGGCTGGCCGGCTCGG CATAGACGCGCAGGG TERM 283 370385 - 370395 + G 70 -8.2 -3.86015 | overlap 370384 AGCTGGAGGTGGGCG GGCG CAG CGCC TTTGTGGACGCCGTC Daci_0330 370198 - 370926 + | AraC family transcriptional regulator Daci_0331 370999 - 371970 + | hypothetical protein TERM 284 372105 - 372137 + G 79 -7.6 -4.46212 | gap 1, overlap 372126 CCCGTCCGCCTGGGG CTGTG-CCTGCGCGC CCTG GCGCGCGCGTCGCGG TTTTCTGCTGGCCGG Daci_0332 372016 - 372933 + | peptidase M48 Ste24p TERM 285 372934 - 372955 + T 100 -12.9 -5.04222 | GCACGGCGCGGGTAG GCAGCCGCC TTCA GGCGGCGGC TTTTTGCTTTGGTTG Daci_0333 374401 - 372944 - | aldehyde dehydrogenase TERM 286 374251 - 374225 - G 74 -13.6 -3.28712 | CGTGGTCTGCGAGAA GCCGTCGAACGC GCG GCGTGCGGCGGC AACGGCTGCATCGAC Daci_0334 375155 - 374517 - | beta-lactamase domain-containing protein Daci_0335 375471 - 375241 - | hypothetical protein Daci_0336 375801 - 376916 + | NAD(P)(+) transhydrogenase (AB-specific) TERM 287 377218 - 377203 - g 78 -10.4 -4.15222 | ATGTTCCGCAAGAAA GAGCGC AAGA GCGCTC CGGCCAAGGACGGCA Daci_0337 376918 - 377262 + | NAD(P) transhydrogenase, subunit alpha part 2 Daci_0338 377259 - 378683 + | NAD(P)(+) transhydrogenase (AB-specific) TERM 288 378732 - 378707 - T 76 -14.7 -2.59431 | opp_overlap 378696 378713, overlap 378710 CTGGGGCACAAGGGA CAAGGGGCGGC GCGA GCCGCTCCTTG CGCTCACACCTTCAT TERM 289 378729 - 378710 - T 70 -10.6 -3.45054 | opp_overlap 378696 378713, overlap 378707 GGGCACAAGGGACAA GGGGCGGC GCGA GCCGCTCC TTGCGCTCACACCTT Daci_0339 379539 - 378736 - | exodeoxyribonuclease III Xth Daci_0340 379556 - 380251 + | orotate phosphoribosyltransferase Daci_0341 380259 - 380927 + | hypothetical protein TERM 290 383319 - 383289 - g 75 -6.1 -4.4078 | gap 1 CGCGCTCAACGAAAA CTT-CGGCGCACCG TTTG CGGTGCGGCTCAAG CCCTTTGTCTCGCCG Daci_0342 381139 - 383745 + | PQQ-dependent dehydrogenase glucose/quinate/shikimate family protein Daci_0343 384264 - 383776 - | hypothetical protein TERM 291 384167 - 384140 - G 100 -17.8 -4.25388 | gap 1, opp_overlap 384150, overlap 384135 GACATCAAAAGGAAA CTGCGCGCCGGCA CCG TGCCGGC-CGCAG CGAGTGTAGCGGCGC Daci_0344 384284 - 384499 + | hypothetical protein Daci_0345 385203 - 384565 - | nitroreductase TERM 292 384992 - 385026 + gT 85 -15.6 -3.20382 | CAGGGCTGCTTGTTG CTGGCCGAAGGCGCCC AGC GCGCGGCGTCGGCCAG TTGCTCGATCTGGGC Daci_0346 386140 - 385178 - | hypothetical protein TERM 293 385864 - 385883 + g 73 -7.1 -4.18197 | gap 1 GGAAGGCGGGGCGCA GCGCC-GG ATCGG CCAGGCGC TTTTCCATGGCGGGT TERM 294 386687 - 386741 + G 75 -9.3 -4.18018 | overlap 386666 386684 CATCCGTTCGCGCAC GCAGCTGACGGCCGACGTG-TTTGCCG CCG CGCAAAAGCTCGT-GGCCGTGGGCTGC TTTTGCATCGGCACC Daci_0347 386499 - 387728 + | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding Daci_0348 389055 - 387793 - | CBS domain-containing protein TERM 295 388911 - 388941 + g 71 -2.3 -4.66537 | overlap 388915 GCCACATGTCCGCAG GCGCGGGGCGTGG CACCA CCGGCCCCCATGC TTTTCTGTTCCAGCC Daci_0349 390316 - 389093 - | beta-lactamase TERM 296 389330 - 389306 - G 78 -13.5 -3.61371 | overlap 389294 AAAGCCCAGGCCAAA GCCCTGGCCCA CCT CGGGCGAGGGC AGCTGGGCGCCGAAA TERM 297 390618 - 390596 - g 90 -13.4 -4.07568 | CGCGCTGGCTGAAAA GCTCGCCCAG AAG CTGGGCCAGC CGCTGGTGGTGGAGA Daci_0350 390405 - 391415 + | hypothetical protein Daci_0351 392906 - 391461 - | glutamyl-tRNA(Gln) amidotransferase, B subunit TERM 298 391998 - 391980 - G 70 -8.8 -3.86346 | overlap 391981 GTACTGCTCGACAAA GCGCGC GGCCATG GCGCGC GGCAGCTCGGGCATG Daci_0352 394409 - 392913 - | glutamyl-tRNA(Gln) amidotransferase, A subunit TERM 299 393309 - 393339 + g 77 -11.3 -3.83568 | gap 2 CATGATGCGGCGCTT GACCTCGTCGCCGAA GCC TTCGGC-ACG-GGTC TTCTTGTACATGTCC Daci_0353 394761 - 394462 - | glutamyl-tRNA(Gln) amidotransferase, C subunit Daci_0354 394974 - 396017 + | cell shape determining protein MreB TERM 300 396190 - 396165 - f 74 -12.5 -3.14931 | TCCAGGCTGCAGCAA GTGCGGCAGGG CAGG CCCTGCCACGC GGGAGGGCGGCATGA Daci_0355 396202 - 397272 + | rod shape-determining protein MreC Daci_0356 397269 - 397787 + | rod shape-determining protein MreD Daci_0357 397801 - 399846 + | penicillin-binding protein 2 TERM 301 399875 - 399857 - T 100 -16 -4.62475 | opp_overlap 399857 ATTGAGAAAGCAAAA GAGCCGGC ATT GCCGGCTC TTTGTTTTCTTGAGC TERM 302 399857 - 399875 + T 100 -16 -4.87892 | opp_overlap 399857 ATTGAGAAAGCAAAA GAGCCGGC ATT GCCGGCTC TTTGTTTTCTTGAGC Daci_0358 400673 - 399915 - | ABC transporter related Daci_0359 401452 - 400670 - | polar amino acid ABC transporter, inner membrane subunit TERM 303 400997 - 400942 - G 72 -13.9 -3.14051 | opp_overlap 400978 400980, overlap 400930 400927 400940 CCACGTCCATGAAGA CGCAGATGCGCGG-CAGGCCCAGGGCG CGTG CGGCCTCGGCCTGGCCGCGCGGC-ACG GCCTGCAGGCCGGCG TERM 304 401215 - 401174 - G 81 -7.1 -4.60797 | gap 1 CGCCCAGACATAAAA GCCCGCGGCCCAGCGCAGGG CGG CCGTGCG-TGAGGTGCGCGC CAGCGCGGCGGCGAT TERM 305 401493 - 401473 - R 100 -11.1 -5.38054 | GGCTAGAAACAAAAA GGCGCCC TGCAAGT GGGCGCC GGTCGGGCAGATCTG Daci_0360 402288 - 401518 - | extracellular solute-binding protein TERM 306 402376 - 402388 + r 83 -4.7 -5.03715 | overlap 402368 402377 GTGCATGGGCCATGG ACGGC GGG GCCGG TTTTTTGCGGCTGGT Daci_0361 403298 - 402540 - | hypothetical protein TERM 307 403377 - 403359 - R 100 -13.1 -5.64274 | GCAGGCATAAAAAAA GCGCCGG ACTTG CCGGCGC TCTGGGAAATGCATC Daci_0362 404597 - 403596 - | alcohol dehydrogenase Daci_0363 404724 - 405647 + | LysR family transcriptional regulator Daci_0364 407500 - 405644 - | glucose-methanol-choline oxidoreductase TERM 308 407561 - 407545 - H 72 -2.2 -4.82901 | GTTTTTTGATAAAAA TTGCAC GCGTA GGGCAA AGCTGTCGTGCGCAC Daci_0365 407693 - 408823 + | hypothetical protein Daci_0366 408823 - 409626 + | ABC transporter related TERM 309 409769 - 409792 + F 76 -8.8 -4.00756 | gap 1, opp_overlap 409771, overlap 409769 409772 CCTGAGTTGTGAATT GAC-TGGGGCC CGC GGCCCCATGCC TTGTTTGCTGGGCTA TERM 310 409772 - 409788 + F 73 -13.7 -2.72559 | opp_overlap 409771, overlap 409769 409769 GAGTTGTGAATTGAC TGGGGCC CGC GGCCCCA TGCCTTGTTTGCTGG TERM 311 410348 - 410332 - g 79 -7.9 -4.50058 | CACCGACAACCAAAA GCGCGTG AGC CAGGCGC TGGAGAACATTGCGG TERM 312 410724 - 410755 + G 77 -15 -3.14564 | TGATCTACGGGCCGG GCCAGGCCCGTCCG GGGC CGGGCGAGCCCGGC TTCGTCGCCCCGTCC Daci_0367 409826 - 410788 + | hypothetical protein Daci_0368 410803 - 411471 + | putative lipoprotein TERM 313 411511 - 411541 + F 100 -15.4 -5.55769 | opp_overlap 411511 CCATTCTCTTGAGAA CGGCTGGTGGGTGC ATT GCATCCGCTGGCCG TTTTTTGTTCTCGGG TERM 314 411599 - 411646 + F 77 -7.6 -4.3255 | gap 1, overlap 411588 411632 TTTTCCGCCCCTGCC GGGTGGTTGCTTTTCGAGGCCGG GTC TCGGCC-CGGCAGCCGACTGCCC TTTCTTGATTCGCCA Daci_0369 412129 - 412347 + | CsbD family protein Daci_0370 412492 - 413079 + | hypothetical protein TERM 315 413116 - 413164 + F 72 -11.6 -3.35992 | gap 1, overlap 413118 413119 CCGCTTCCCCCTCTC TACCCGCTTCGCGGGGGAGGGGG ACGA CGCCCTCGC-CGCGAGGCGGCTC TTGCTTGGCGTCCCT TERM 316 413118 - 413162 + F 78 -14.2 -3.24825 | gap 1, overlap 413116 413119 GCTTCCCCCTCTCTA CCCGCTTCGCGGGGGAGGGGG ACGA CGCCCTCGC-CGCGAGGCGGC TCTTGCTTGGCGTCC TERM 317 413119 - 413161 + F 85 -17.7 -2.54574 | gap 1, overlap 413118 413116 CTTCCCCCTCTCTAC CCGCTTCGCGGGGGAGGGGG ACGA CGCCCTCGC-CGCGAGGCGG CTCTTGCTTGGCGTC TERM 318 413217 - 413232 + F 84 -11.8 -4.07678 | opp_overlap 413217, overlap 413213 413210 ATCCGCCTTGACCAA GCCCCG TTCG CGGGGC TTTGCTGTTTTCGGG Daci_0371 413326 - 413826 + | hemerythrin-like metal-binding protein Daci_0372 414517 - 413870 - | multiple antibiotic resistance (MarC)-related protein Daci_0373 414707 - 415399 + | carboxymethylenebutenolidase Daci_0374 415717 - 415400 - | hypothetical protein TERM 319 415804 - 415780 - R 74 -5.5 -4.57073 | overlap 415785 CAGCCCCGCCAAAAA CGGAACCGTGC CCG GCGCAGCACCG GGAAGATGAAAAGCC TERM 320 415844 - 415817 - R 71 -5.5 -4.4261 | gap 1, opp_overlap 415835, overlap 415835 CCGGGAAGATGAAAA GCCGC-TGCCTC ATCAA AAGGCGTGCGGC TGCTGCGCCTACGTT Daci_0375 416724 - 416080 - | hypothetical protein TERM 321 416488 - 416515 + g 72 -4 -4.56597 | gap 1, overlap 416484 416491 ACCAGCCCCTGTGGT CCA-GGCCGAGTC GAA GGCCAGGCCATGG TTTTTCAGCAGCAGG TERM 322 416567 - 416606 + g 72 -8.5 -4.07568 | gap 1, overlap 416568 416570 CCCCGGTTGCCGCGC ACGCCGGGGCCGCTGATG GTGAG CA-CGGCGGCTTCGGTGC TTTTCCCGGGGGCGG Daci_0376 419333 - 416721 - | hypothetical protein TERM 323 418254 - 418232 - G 86 -12.6 -4.13767 | opp_overlap 418246 418251 CGTTGTAGTTGAAAA CGGCGCCACC CAG GCCGGCGCCG CCGCCGCTGCTGTTG Daci_0377 419553 - 420290 + | two component LuxR family transcriptional regulator Daci_0378 420310 - 422268 + | putative signal transduction histidine kinase Daci_0379 423458 - 422265 - | Mg2 transporter protein CorA family protein Daci_0380 424530 - 423463 - | delta-aminolevulinic acid dehydratase Daci_0381 424594 - 425022 + | hypothetical protein TERM 324 425237 - 425248 + G 76 -2.2 -4.72986 | gap 1, overlap 425226 AATATCGTCGGCTAC GCGCC GCT GG-GC TTTTTCCTGGCGCTG Daci_0382 425054 - 426187 + | VanZ family protein Daci_0383 426198 - 426572 + | ferredoxin-like protein TERM 325 427206 - 427221 + G 72 -4.6 -4.41348 | TGCCTGTTACCGTCG TGCCCG GGGG CGGTCA TTTCTTTCACGGACA Daci_0384 426653 - 427288 + | putative transmembrane protein TERM 326 427309 - 427334 + F 95 -12.5 -4.25074 | opp_overlap 427311, overlap 427312 427325 CGCGCCGCTGCTCAA CAGGCCTGCCC CATC GGGCGGGCATG TTTTCGCCTTTCCTG Daci_0385 427381 - 428550 + | Serine-type D-Ala-D-Ala carboxypeptidase Daci_0386 428708 - 429085 + | 30S ribosomal protein S12 Daci_0387 429246 - 429719 + | 30S ribosomal protein S7 TERM 327 429740 - 429774 + F 76 -15.1 -2.52676 | gap 1, opp_overlap 429744, overlap 429744 CTTCGCTCCCGATCA GAC-AGGCCGCATGCA TTTT TGCCTGCGGCCTTGTC TCGATTAGGAGCATC TERM 328 429769 - 429744 - f 79 -14.7 -2.94099 | opp_overlap 429744 429740 GCTCCCGATCAGACA GGCCGCATGCA TTTT TGCCTGCGGCC TTGTCTCGATTAGGA TERM 329 429744 - 429769 + F 90 -14.7 -3.551 | opp_overlap 429744, overlap 429740 GCTCCCGATCAGACA GGCCGCATGCA TTTT TGCCTGCGGCC TTGTCTCGATTAGGA TERM 330 430711 - 430686 - g 70 -8.9 -3.9461 | overlap 430687 TGCCTTCAAGAACAA GGGCGTGCAGC GCAT GCTGGACGCCG TGATCGACTACCTGC Daci_0388 429868 - 431976 + | translation elongation factor G TERM 331 432052 - 431996 - f 82 -15.2 -3.23274 | gap 2, opp_overlap 432006 TTTTGTATAATTGAA GGCTTTTGAATCGCAGCATCCCGGCGCC TTT GGCTCCGGGATGCTGCGATTTTT--GCC GGTCTGCGATCCCAT TERM 332 432006 - 432044 + F 100 -29 -4.61231 | opp_overlap 431996 TTGAAGGCTTTTGAA TCGCAGCATCCCGGCGCC TTT GGCTCCGGGATGCTGCGA TTTTTGCCGGTCTGC TERM 333 432177 - 432167 - g 91 -5.4 -5.46706 | ATGGCAAAAGAAAAA TTCC AGC GGAA CAAGCCGCACGTCAA Daci_0389 432152 - 433342 + | elongation factor Tu Daci_0390 433367 - 433678 + | 30S ribosomal protein S10 TERM 334 433679 - 433713 + F 80 -10.7 -4.05788 | gap 1, opp_overlap 433682 ATCAAGCTGCAATAA GAACTTC-ACGGCCCC TTGC GGGGCCGTTGAAGGGC TTTGATTTAACGCGA TERM 335 433710 - 433682 - f 95 -15.4 -3.95725 | gap 1, opp_overlap 433679 AAGCTGCAATAAGAA CTTC-ACGGCCCC TTGC GGGGCCGTTGAAG GGCTTTGATTTAACG TERM 336 433718 - 433758 + F 77 -11.4 -3.60971 | gap 1, opp_overlap 433724, overlap 433719 CGTTGAAGGGCTTTG ATTTAACGCGAACTTGCTT GAAA AGGCA-GTTCGCGTTAAAA TTTGGGGCTTCGCCT TERM 337 433719 - 433757 + F 77 -14.9 -2.76261 | gap 1, opp_overlap 433724, overlap 433718 GTTGAAGGGCTTTGA TTTAACGCGAACTTGCTT GAAA AGGCA-GTTCGCGTTAAA ATTTGGGGCTTCGCC Daci_0391 433889 - 434563 + | ribosomal protein L3 TERM 338 434779 - 434763 - g 70 -3.6 -4.4078 | opp_overlap 434758 434766 434768, overlap 434764 GCCGTTCAAGCAAAA GGGCAC CGGCC GTGCTC GTGCCGGTATGTCTT TERM 339 434862 - 434850 - g 72 -3.4 -4.63218 | TCTGCCTGAAGAAAA CTTC ACGCA GAAG ATCAACAAGAAGATG Daci_0392 434563 - 435183 + | 50S ribosomal protein L4 Daci_0393 435180 - 435494 + | ribosomal protein L25/L23 Daci_0394 435497 - 436321 + | 50S ribosomal protein L2 Daci_0395 436332 - 436607 + | ribosomal protein S19 Daci_0396 436618 - 436950 + | ribosomal protein L22 Daci_0397 436967 - 437839 + | 30S ribosomal protein S3 Daci_0398 437842 - 438258 + | 50S ribosomal protein L16 Daci_0399 438269 - 438466 + | ribosomal protein L29 Daci_0400 438480 - 438749 + | ribosomal protein S17 TERM 340 438805 - 438787 - f 93 -14.6 -3.84712 | opp_overlap 438787 CAAGGCCACAGGAAA CGACCCAC AAT GTGGGTCG TTTTTTCGTTTGGGG TERM 341 438787 - 438805 + F 100 -14.6 -5.37593 | opp_overlap 438787 CAAGGCCACAGGAAA CGACCCAC AAT GTGGGTCG TTTTTTCGTTTGGGG Daci_0401 438796 - 439374 + | redoxin domain-containing protein TERM 342 439429 - 439452 + T 100 -15.4 -5.19879 | opp_overlap 439429 GCTTTTGCGAAAAAA GGCATTGCAC CCAG GTGCAATGCC TTTTTGTATTTCAGG TERM 343 439452 - 439429 - T 100 -15.4 -5.00616 | opp_overlap 439429 GCTTTTGCGAAAAAA GGCATTGCAC CCAG GTGCAATGCC TTTTTGTATTTCAGG Daci_0402 440076 - 439486 - | GCN5-related N-acetyltransferase Daci_0403 440801 - 440043 - | cytochrome B561 TERM 344 440591 - 440556 - GH 77 -11 -3.65353 | gap 1, opp_overlap 440547, overlap 440558 CCAAAGCAGGCGAAA CAGCAGCAGGGCCA-GC ATG GCATGGCCCAGCAGCAG ATGCCAGTTCATGGC TERM 345 440589 - 440558 - GH 76 -12.2 -3.40134 | gap 1, opp_overlap 440547, overlap 440556 AAAGCAGGCGAAACA GCAGCAGGGCCA-GC ATG GCATGGCCCAGCAGC AGATGCCAGTTCATG TERM 346 440880 - 440860 - H 82 -11.8 -3.90112 | opp_overlap 440875, overlap 440875 CCGTGGTCAATCAAA GCGGCGCC GGCAA GACGCCGC TGCCATACTGGCCCG Daci_0404 440966 - 441376 + | cytochrome c prime TERM 347 441421 - 441407 - T 93 -8.5 -4.90266 | opp_overlap 441407, overlap 441401 TGCACCAATGAAAAA CCGGC CTGGT GCCGG TTTTTTTGTGCCCTG TERM 348 441407 - 441421 + T 100 -8.5 -5.626 | opp_overlap 441407 441401 TGCACCAATGAAAAA CCGGC CTGGT GCCGG TTTTTTTGTGCCCTG Daci_0405 442060 - 441449 - | redoxin domain-containing protein Daci_0406 442076 - 442693 + | hypothetical protein Daci_0407 442741 - 443280 + | PTS system fructose subfamily IIA component Daci_0408 443249 - 443518 + | phosphotransferase system, phosphocarrier protein HPr TERM 349 443612 - 443564 - f 72 -11.6 -3.33884 | gap 2, opp_overlap 443585, overlap 443558 443562 443565 CGCAAAAGAGCAACA CGCGCCGGGCCCGGACGCTGCCGC ATT GCGAC-G-GCCCGGAGCCTGCGCA GCAGCAGGCAAAGGA Daci_0409 443636 - 445411 + | phosphoenolpyruvate-protein phosphotransferase TERM 350 445613 - 445627 + T 95 -3.5 -5.626 | gap 1 GCCAGCCAGCGGTCT GCC-GG TTAG CCAGGC TTTTTTTCTACGATG TERM 351 445673 - 445697 + T 100 -8.6 -5.4833 | gap 1, opp_overlap 445673 TCGCCTCCAATTCAA GCAGAGCATGC GTCA GCG-GCTCTGC TTTTTTGTTGCCTGC TERM 352 445773 - 445747 - T 100 -18 -4.72272 | TGCGGCCATGAAAAA GCCCTCGGCAGC AGG GCTGGCGAGGGC TGGGCATTGAGAGCC Daci_0410 446786 - 445806 - | lipoyl synthase Daci_0411 447522 - 446797 - | lipoate-protein ligase B Daci_0412 447836 - 447519 - | hypothetical protein TERM 353 448038 - 448057 + H 84 -5.6 -4.94972 | opp_overlap 448038, overlap 448031 GCATGCCCGTAACAA CCCCTATC GTTC GGCAGGGG TTTTTACTTATAATC TERM 354 448146 - 448130 - g 79 -2.9 -4.90013 | overlap 448134 GAACTCAATGAAAAA CTACGCC GCT GACACAG ACGCTGACAGGGAAC Daci_0413 448122 - 448604 + | putative ATP synthase protein I TERM 355 448718 - 448706 - g 79 -7.7 -4.49337 | opp_overlap 448706, overlap 448701 GAACATCAAGCAAAA GTCGA TCA TCGAC TTTTCGGTCATCAAC TERM 356 448706 - 448718 + G 73 -7.7 -4.21194 | opp_overlap 448706 448701 GAACATCAAGCAAAA GTCGA TCA TCGAC TTTTCGGTCATCAAC Daci_0414 448626 - 449489 + | F0F1 ATP synthase subunit A Daci_0415 449541 - 449789 + | F0F1 ATP synthase subunit C Daci_0416 449825 - 450295 + | F0F1 ATP synthase subunit B TERM 357 450432 - 450413 - g 72 -13.6 -3.14132 | GCCTGGGCGGAGGAA TTGGCGGC GATT GCCGCCAA TCCGCAATTGCGCCA Daci_0417 450308 - 450847 + | F0F1 ATP synthase subunit delta Daci_0418 450896 - 452449 + | F0F1 ATP synthase subunit alpha Daci_0419 452468 - 453340 + | ATP synthase F1, gamma subunit Daci_0420 453375 - 454784 + | F0F1 ATP synthase subunit beta TERM 358 455018 - 455044 + G 71 -3 -4.56597 | CGCGCTTTGTCGCCC TGCCCGGT GAATCCGGCGA ACTGGGCA TTTTTCCCCGCCACA Daci_0421 454945 - 455361 + | F0F1 ATP synthase subunit epsilon TERM 359 455403 - 455388 - T 100 -11.8 -5.03715 | opp_overlap 455388 ACCAGCCGCAAAAAA GCCGCC TTCG GGCGGC TTTTTTCATGGTGCG TERM 360 455388 - 455403 + T 100 -11.8 -5.1861 | opp_overlap 455388 ACCAGCCGCAAAAAA GCCGCC TTCG GGCGGC TTTTTTCATGGTGCG Daci_0422 455687 - 455427 - | hypothetical protein Daci_0423 456338 - 455796 - | hypothetical protein Daci_0424 457212 - 456340 - | hypothetical protein Daci_0425 457833 - 457246 - | LemA family protein TERM 361 457895 - 457865 - H 100 -12.6 -4.32482 | opp_overlap 457886, overlap 457851 AGCGACAATGGAAAA CAGTATCGCGCACG ACG CATGCGCAATGCTG GCGATTGTGCTGCGC Daci_0426 457982 - 458968 + | alpha/beta hydrolase fold TERM 362 459171 - 459150 - g 70 -4.3 -4.4078 | overlap 459126 459152 GGTGCGCAACGAAAA GCTGGCG GACTTCAT CGCCCGC AACTATCTTGCCGAG Daci_0427 458974 - 459525 + | hypothetical protein TERM 363 459774 - 459743 - T 82 -11.6 -3.87994 | opp_overlap 459749, overlap 459744 459749 ATCCATCCCCAGAAA GCGAAAGCGCAACC CGAG GGCTGCGCTTTCAT CGTGAGTGGGTGGTG TERM 364 459773 - 459744 - T 79 -15.1 -2.92475 | opp_overlap 459749, overlap 459743 459749 TCCATCCCCAGAAAG CGAAAGCGCAACC CGAG GGCTGCGCTTTCA TCGTGAGTGGGTGGT TERM 365 459749 - 459768 + T 71 -9.2 -3.79747 | opp_overlap 459744 459743 459749 CCCCAGAAAGCGAAA GCGCAACC CGAG GGCTGCGC TTTCATCGTGAGTGG TERM 366 459768 - 459749 - T 82 -11.4 -3.89215 | opp_overlap 459749, overlap 459744 459743 CCCCAGAAAGCGAAA GCGCAACC CGAG GGCTGCGC TTTCATCGTGAGTGG Daci_0428 460050 - 459805 - | hypothetical protein Daci_0429 461321 - 460047 - | conjugation TrbI family protein Daci_0430 462313 - 461324 - | P-type conjugative transfer protein TrbG Daci_0431 463014 - 462310 - | conjugal transfer protein Daci_0432 464406 - 463033 - | P-type conjugative transfer protein TrbL TERM 367 463079 - 463109 + g 78 -18.2 -2.71731 | TGGCTGGAACTGCCG CCGTCGCCCCCGCG CAG CGTGTGGGCGGCGG TGGTTGCGGCATGGG TERM 368 463921 - 463908 - G 76 -8.1 -4.26076 | TCAGCGTGATGAAAA GCTGG ATCG CCAGC ACGAAGAAGCACAGG Daci_0433 464702 - 464403 - | putative lipoprotein TERM 369 464554 - 464523 - G 83 -13.1 -4.03234 | gap 2 CTGGCCGGAGAGAAA GCGCCGCAGGTCGGC CTGG GCC-ACCTGCG-CGC AAAACGCGCCGTCGT Daci_0434 465440 - 464715 - | P-type conjugative transfer protein TrbJ Daci_0435 467890 - 465437 - | AAA ATPase TERM 370 465872 - 465893 + g 86 -2.9 -5.10461 | GTCCGCGAGCGACTG CGTGGCG AAGATCAC CGACACG TTTTTCTTGCGTAGC TERM 371 466999 - 467037 + g 100 -14.7 -4.56775 | gap 1, opp_overlap 467005 ACGGGCTTTCCTGCT GGAAGATCGTT-TCGCGC AGCA GCGCGATGACGTTCTTCC TTTTTGCAAACCACT TERM 372 467341 - 467367 + g 74 -12.3 -3.55444 | overlap 467337 467342 TGTGCAGGTAGGTCA GCGTCTGGCTG TCATC CAGCCAGACGA TTTCCGGCATCACGC TERM 373 467342 - 467366 + g 74 -15.8 -2.73124 | overlap 467337 467341 GTGCAGGTAGGTCAG CGTCTGGCTG TCATC CAGCCAGACG ATTTCCGGCATCACG Daci_0436 468178 - 467906 - | putative conjugal transfer TrbD transmembrane protein Daci_0437 468558 - 468175 - | conjugal transfer protein TrbC Daci_0438 469616 - 468555 - | P-type conjugative transfer ATPase TrbB Daci_0439 470077 - 469613 - | CopG/DNA-binding domain-containing protein Daci_0440 472095 - 470074 - | TRAG family protein TERM 374 471875 - 471821 - G 72 -14.9 -2.93382 | gap 1 CGCCAGATCGACATA CCGATGGCGACCACCACCGCCAGCAG GCCA CTGCCGCCCGCGATGG-CGCCGCCGG TATCGAACACGCGCG TERM 375 472261 - 472235 - R 100 -14.5 -5.24551 | gap 1 CGAAAGCAATAAAAA CGCCGCAA-GCG CGAG CGCATTGCGGCG TAGTGAGGTAACAGC Daci_0441 472531 - 472313 - | hypothetical protein TERM 376 472362 - 472349 - G 77 -3.7 -4.68593 | overlap 472350 472351 CCGATCACCGAAAAA TCGCC GTTT GGCGG CTTCGGCAGCACGCA Daci_0442 473480 - 472554 - | LysR family transcriptional regulator TERM 377 473546 - 473588 + r 95 -16.2 -3.86822 | opp_overlap 473549, overlap 473549 TCCGGGGTAGTCACC GAAGGCCATGCGCCTATCCG AAT CGGACAGGCGCTGGGACTTC TTTCTGACGCCATTG TERM 378 473549 - 473585 + r 89 -12.1 -4.06419 | opp_overlap 473549, overlap 473546 GGGGTAGTCACCGAA GGCCATGCGCCTATCCG AAT CGGACAGGCGCTGGGAC TTCTTTCTGACGCCA TERM 379 473585 - 473549 - R 80 -14.3 -3.07816 | opp_overlap 473549 473546 GGGGTAGTCACCGAA GGCCATGCGCCTATCCG AAT CGGACAGGCGCTGGGAC TTCTTTCTGACGCCA Daci_0443 473867 - 473628 - | hypothetical protein Daci_0444 474967 - 474041 - | copper resistance D domain-containing protein TERM 380 474635 - 474606 - G 72 -9.4 -4.08767 | opp_overlap 474596 GCCATCGCTGCAAAA CGCAGTGTTG AATTCATGCG CAACACTGCG ATGAGCACACACGTC TERM 381 474938 - 474928 - G 72 -8.2 -4.04206 | CCAGGTCCAGATAAA GCGC CAG GCGC AGGACGATGGTCAAC Daci_0445 475358 - 474972 - | copper resistance protein CopC Daci_0446 477980 - 475500 - | heavy metal translocating P-type ATPase TERM 382 477328 - 477315 - G 71 -9.5 -3.78934 | GCCGCGGGAGAAGAA GGGCC AGCC GGCCC ACAGCACGATCGGCA TERM 383 478099 - 478055 - R 100 -18.5 -3.59946 | opp_overlap 478059 478062 CGCGCAAGGAGACAA GCGCGGCGTCGCGTGCTCGCA CGG TGCGAGCACGCGACTCATTGC TTCTGCTCCTTGGCG TERM 384 478059 - 478095 + r 100 -20.9 -3.48438 | opp_overlap 478055, overlap 478062 CAAGGAGACAAGCGC GGCGTCGCGTGCTCGCA CGG TGCGAGCACGCGACTCA TTGCTTCTGCTCCTT TERM 385 478062 - 478092 + r 100 -25.6 -2.87988 | opp_overlap 478055, overlap 478059 GGAGACAAGCGCGGC GTCGCGTGCTCGCA CGG TGCGAGCACGCGAC TCATTGCTTCTGCTC Daci_0447 478365 - 478093 - | hypothetical protein Daci_0448 478884 - 478399 - | hypothetical protein Daci_0449 479902 - 478922 - | copper resistance B precursor Daci_0450 481829 - 479928 - | CopA family copper resistance protein TERM 386 481677 - 481697 + g 78 -13.9 -3.62046 | opp_overlap 481672 CTTCAGCACAGGGGC GGCACCGCG CGT CGCGGAGCC TTGTTGGGCAAATGC Daci_0451 482085 - 482777 + | two component heavy metal response transcriptional regulator Daci_0452 482749 - 484182 + | heavy metal sensor signal transduction histidine kinase Daci_0453 486295 - 484259 - | hypothetical protein TERM 387 484978 - 485000 + g 71 -9.9 -3.78934 | gap 1, overlap 484940 484940 CGGTGCGGTACAGGC CATCGCTCGC CAGC GCG-GCGATG TTCTTGTCGGCCGCG TERM 388 486383 - 486405 + r 89 -10.5 -4.7033 | overlap 486384 GTGCAGACAGGCTTT CGACGCGGC CCGGT GCCGCGTCC TTTTGTCTTGCCTTC TERM 389 486384 - 486404 + r 81 -14 -3.41114 | overlap 486383 TGCAGACAGGCTTTC GACGCGGC CCGGT GCCGCGTC CTTTTGTCTTGCCTT TERM 390 486606 - 486570 - R 79 -15.2 -2.87132 | gap 1, overlap 486593 GCTGCGCCGGAGACA GCGCGAAGTGC-GGTGC GAAT GCACCCGCACTGCACGC GCGACGACACGGCGA Daci_0454 487277 - 486690 - | putative conjugal transfer TRAF transmembrane protein Daci_0455 487831 - 487274 - | hypothetical protein Daci_0456 488103 - 487828 - | hypothetical protein TERM 391 488052 - 488071 + g 75 -10.6 -3.97834 | opp_overlap 488023, overlap 488023 488068 GATTCGCGGGCGGAC GCGCGCCG ATGC CGACGCGC TTTGTCGTGCGCTTG Daci_0457 488738 - 488100 - | cobyrinic acid ac-diamide synthase TERM 392 488786 - 488820 + r 72 -11.3 -3.41527 | overlap 488789 TTGCCGCTGTGCTTC GCGCCGCGTGGCGGT TTTCC ACCGAGGTGCGGCGC TTCTACTACCAGTTA TERM 393 488789 - 488799 + r 71 -8.2 -4.07885 | overlap 488786 CCGCTGTGCTTCGCG CCGC GTG GCGG TTTTCCACCGAGGTG Daci_0458 489849 - 488992 - | putative replication initiator and transcription repressor protein TERM 394 490253 - 490283 + r 72 -11.3 -3.28712 | opp_overlap 490240 490278 AAGCTCTCTTGCTCA GGGTCGTTTTG CGTGGCCTT CAAAACGACCC TTCTCAAGCGGCGCA Daci_0459 491023 - 490250 - | hypothetical protein Daci_0460 491714 - 491367 - | putative lipoprotein TERM 395 492232 - 492196 - g 71 -10.8 -3.57792 | gap 1, overlap 492184 TGAGCGAGGCTGAAA GCCAGCTCGCAGCGGCG GCCC CGCCG-TAGGCGCTGGC CCGGCCGATCCGGCG Daci_0461 491931 - 492224 + | XRE family transcriptional regulator TERM 396 492234 - 492263 + T 80 -14.9 -3.01712 | CCGTAGGCGCTGGCC CGGCCGATCCGGC GCAA GCCGGTTCGGCGG TGTTCAAGGGGCGCC TERM 397 492507 - 492489 - T 82 -12.4 -3.66288 | CATGCCTCAACAGAA GCGGCCCA ACA TGGGCCAC GCTCCTGCAATGACC TERM 398 492586 - 492547 - T 100 -18.5 -3.53811 | gap 1, opp_overlap 492575, overlap 492521 TGCAGCTCTGCGAAA GCGGCACGGCGCCCCGCC GCGTG GGCGGGGCGCTG-GCGGC CATCAGGCCGCCTGG Daci_0462 493620 - 492589 - | hypothetical protein TERM 399 493663 - 493637 - R 77 -11.4 -3.57792 | GGACGCAGCTCGAAA GCCCGGCGGCGC TTC GCGCCGACACGC CCATGCCATTCAATA Daci_0463 494086 - 493694 - | hypothetical protein Daci_0464 495036 - 494083 - | cation diffusion facilitator family transporter Daci_0465 495355 - 495083 - | hypothetical protein TERM 400 495444 - 495466 + r 100 -19.2 -3.53012 | opp_overlap 495409 495432 AAACCCGACAGCGCG TTGCCGGGCG TGA CGCCCGGCAA TTTCAACGCCGCCGC TERM 401 495473 - 495506 + r 89 -15.9 -3.41229 | GCCCGGCAATTTCAA CGCCGCCGCCTGAGT GCCA GCGAAGGCGGCGGCG TTCTGATGGAGCTGT TERM 402 495525 - 495567 + r 89 -12.8 -4.07568 | gap 3, opp_overlap 495535, overlap 495528 495562 495563 TGATGGAGCTGTTGG GCCTTCAACACCGGGCGCGGC CACC GCCGCGCCCGGA-TTG--GGC TTTTACCGCGCCCAG TERM 403 495528 - 495566 + r 80 -15.3 -3.04398 | gap 1, opp_overlap 495535, overlap 495525 495562 495563 TGGAGCTGTTGGGCC TTCAACACCGGGCGCGGC CACC GCCGCGCCCGGA-TTGGG CTTTTACCGCGCCCA TERM 404 495560 - 495535 - R 100 -23.3 -3.01712 | opp_overlap 495528 495525 GTTGGGCCTTCAACA CCGGGCGCGGC CACC GCCGCGCCCGG ATTGGGCTTTTACCG TERM 405 495562 - 495615 + r 73 -8.7 -3.88541 | gap 1, opp_overlap 495590, overlap 495528 495525 495563 ACCGCCGCGCCCGGA TTGGGCTT-TTACCGCGCCCAGGACG GAA CGGCCTGGGCGCGGTGCTGATCGCGG TTATTCCTTCGTTTT Daci_0466 495825 - 495616 - | hypothetical protein Daci_0467 497952 - 495889 - | nuclease TERM 406 498003 - 497983 - R 75 -8.2 -4.15366 | overlap 497984 AGTGAAACAAGGAAA TGGAGGGG AACCG CCCCTCCG GCGGGGGAACGGTTC Daci_0468 498841 - 498017 - | hypothetical protein TERM 407 498147 - 498158 + g 76 -2.2 -4.67982 | CGCCCGGACAGGCCG CCTT TGGT GAGG TTTTCTTGAGTGCGG TERM 408 499420 - 499453 + r 74 -10.9 -3.55444 | gap 1, overlap 499423 499424 TCTGCGGCTGATGTT GTCTGGCCGATCCGGC GCA GCCGGTTCGGC-GGTC TTTGAGGGGTGCCAA TERM 409 499423 - 499451 + r 76 -12.3 -3.35597 | overlap 499420 499424 GCGGCTGATGTTGTC TGGCCGATCCGGC GCA GCCGGTTCGGCGG TCTTTGAGGGGTGCC TERM 410 499424 - 499450 + r 72 -13.6 -2.61144 | overlap 499423 499420 CGGCTGATGTTGTCT GGCCGATCCGGC GCA GCCGGTTCGGCG GTCTTTGAGGGGTGC Daci_0469 499830 - 499552 - | hypothetical protein TERM 411 499891 - 499860 - R 78 -10 -3.86897 | overlap 499866 TCGATGGTCGAGAAA GCACAAGGAGCGCC TTGC GGCGCTCCCAAGGC CAGGTCAGACAGCGA TERM 412 499885 - 499866 - R 90 -15 -3.64915 | overlap 499860 GTCGAGAAAGCACAA GGAGCGCC TTGC GGCGCTCC CAAGGCCAGGTCAGA Daci_0470 500246 - 499896 - | hypothetical protein TERM 413 500615 - 500605 - R 83 -2.4 -5.19879 | GGTGAAACAGAAAAA CGCC TTG GGTG ACGATGCTGATCACC Daci_0471 501149 - 500712 - | hypothetical protein TERM 414 501202 - 501179 - R 85 -9.4 -4.59773 | overlap 501180 TCTGAGCTTTAAAAA TGGGCCGGCC TTCT GGCAGGCCCC GGATGGAACGCGGTC TERM 415 501201 - 501180 - R 76 -12.9 -3.35542 | overlap 501179 CTGAGCTTTAAAAAT GGGCCGGCC TTCT GGCAGGCCC CGGATGGAACGCGGT Daci_0472 501673 - 501257 - | hypothetical protein Daci_0473 505152 - 501982 - | CzcA family heavy metal efflux protein TERM 416 503828 - 503803 - G 83 -5.3 -4.88736 | CAGCAGCGAGAAAAA CAGCGCCGG CCCCACCT CCGCCGCCG ATTCGCCGATGACGT Daci_0474 506786 - 505149 - | RND family efflux transporter MFP subunit TERM 417 506223 - 506195 - G 75 -9.5 -4.03413 | opp_overlap 506195, overlap 506205 AGTCCGGGACATAAA GGCTGACCAAGGG CTG CCCTTTGGCAACC GGGTCCAGCGTGGCG Daci_0475 508120 - 506807 - | putative outer membrane cation efflux protein TERM 418 507108 - 507122 + g 76 -7 -4.2558 | overlap 507109 GCGCGCGTGGCTTCC TCGCGC TCG GCGCGC TTTTGCTCGACACTG TERM 419 507148 - 507170 + g 81 -3.2 -4.91109 | overlap 507150 CACTGGCGAGCTTGG CGGCCAGCTC GCG GTCCTGGCGG TTTTTCTGGTCCCAC Daci_0476 508728 - 508255 - | hypothetical protein Daci_0477 509246 - 508725 - | MerR family transcriptional regulator Daci_0478 509850 - 509410 - | MerR family transcriptional regulator Daci_0479 510137 - 512956 + | heavy metal translocating P-type ATPase Daci_0480 512973 - 513452 + | lipoprotein signal peptidase TERM 420 514078 - 514100 + G 77 -4 -4.80167 | overlap 514077 514096 GGCTATGGTTCGGGG CTTCGCGGCA GGC TGCGACGGAG TTTTCGTTTTTCCTC TERM 421 514096 - 514106 + G 77 -3.2 -4.73388 | overlap 514077 514078 CGCGGCAGGCTGCGA CGGA GTT TTCG TTTTTCCTCGGCATT TERM 422 514181 - 514194 + G 72 -3.7 -4.63184 | GGGCGCATTGTCGAG CGACG ACAT CGGCG TTTTTGCAATGGGTT Daci_0481 513540 - 514343 + | undecaprenol kinase Daci_0482 514575 - 516524 + | iron permease FTR1 Daci_0483 518276 - 516588 - | putative mercuric reductase Daci_0484 518566 - 518288 - | mercuric transport protein periplasmic component Daci_0485 518929 - 518579 - | putative mercuric transport protein TERM 423 518765 - 518744 - G 71 -2.2 -4.62069 | overlap 518746 GCGCCAGGCGAAAAA CAGCGC CATCAGGGCC GCGCCG ATGAAAATCGGCCGG TERM 424 518891 - 518875 - G 82 -13.7 -3.67775 | opp_overlap 518877 AGGCCGACGCAAGAA TGGCGGC GAG GCCGCCA GCGGCCAGGGCGCCA Daci_0486 519001 - 519408 + | MerR family transcriptional regulator Daci_0487 519566 - 519913 + | ArsR family transcriptional regulator Daci_0488 519926 - 520396 + | glyoxalase/bleomycin resistance protein/dioxygenase Daci_0489 520409 - 520906 + | protein tyrosine phosphatase TERM 425 520956 - 520936 - g 74 -11.8 -3.75153 | overlap 520937 GTGTTGGAACCCAAA CGGCCGGC CGCGT GCCGGCCA CCTCCACCATGAGCG Daci_0490 520917 - 522002 + | arsenical-resistance protein Daci_0491 522017 - 522439 + | arsenate reductase Daci_0492 522432 - 523154 + | arsenical resistance protein ArsH Daci_0493 523250 - 523681 + | hypothetical protein TERM 426 523712 - 523734 + T 78 -13.6 -3.16564 | opp_overlap 523712 ACCTCCGAGCCGAAA TTCTCGTATC AGC GATACGAGAA TTCATCGGCTGCGGA TERM 427 523734 - 523712 - T 88 -13.6 -3.60098 | opp_overlap 523712 ACCTCCGAGCCGAAA TTCTCGTATC AGC GATACGAGAA TTCATCGGCTGCGGA Daci_0494 523911 - 523720 - | hypothetical protein Daci_0495 524435 - 523911 - | prophage CP4-57 regulatory Daci_0496 524718 - 524440 - | hypothetical protein TERM 428 524784 - 524835 + r 86 -13.8 -3.53012 | gap 1, overlap 524787 TGCTGCAAGGCTTGG TGACCCACGCTCGAATTGTCGCGAC AGC GTCGCGACAATTCG-GCGGGCCTGA TTTCCGACACGAAAG TERM 429 524787 - 524832 + r 81 -15.5 -2.90496 | gap 1, overlap 524784 TGCAAGGCTTGGTGA CCCACGCTCGAATTGTCGCGAC AGC GTCGCGACAATTCG-GCGGGCC TGATTTCCGACACGA Daci_0497 526132 - 524894 - | integrase family protein TERM 430 526291 - 526278 - R 100 -9.5 -5.37593 | opp_overlap 526278 TGTGAAATGAAAAAA CCGGC CGAA GCCGG TTGGTGCCAGGCATC Daci_0498 526860 - 526318 - | cytochrome c class I TERM 431 527043 - 527016 - R 100 -14.2 -4.72272 | opp_overlap 527018, overlap 527038 GCGCGCCATGAAAAA GAGGTGTTCACC TTGC GGAGAACACCTC TGTGCGGTGGGCGCG TERM 432 527092 - 527114 + r 72 -13.4 -2.67055 | overlap 527084 527082 TCTTACTGCGCGGGC GCGGTAGCCG GCG TGGCTGCCGC TGCTGTCGCTGTTCT Daci_0499 528536 - 527079 - | RND efflux system outer membrane lipoprotein TERM 433 528255 - 528309 + g 78 -12.7 -3.78934 | gap 1 GTCGGCGCGCGTGAT CCG-GTACTGGGCCTGGGCGCGCTCG ATGT TGAGCGCGGCCACGCGCAGGTCACGG TTGTTGTCCAGCGCG Daci_0500 531684 - 528529 - | hydrophobe/amphiphile efflux-1 (HAE1) family protein TERM 434 529076 - 529093 + g 72 -6.9 -4.25104 | opp_overlap 529075 529074 GCGTACAGGAAGATG GCTTGCG AGCC CGCCAGC TTTTCCTCGCGCGAC Daci_0501 532992 - 531700 - | RND family efflux transporter MFP subunit TERM 435 532851 - 532863 + g 91 -9.1 -5.08088 | overlap 532846 CGGCGGGCATCTGCT GCTGC GCG GCAGC TTTTTCTTCGGGCTT Daci_0502 533152 - 533817 + | TetR family transcriptional regulator Daci_0503 534475 - 535665 + | elongation factor Tu TERM 436 535891 - 535904 + G 73 -9.5 -3.85704 | overlap 535901 GACAAAGCCAAGCTT GCCGC AGTC GCGGC TTTAGTCGTTGCTGC Daci_0504 535837 - 536220 + | preprotein translocase subunit SecE Daci_0505 536220 - 536804 + | NusG antitermination factor Daci_0506 536946 - 537377 + | ribosomal protein L11 Daci_0507 537378 - 538073 + | 50S ribosomal protein L1 Daci_0508 538300 - 538827 + | ribosomal protein L10 Daci_0509 538865 - 539242 + | ribosomal protein L7/L12 TERM 437 539251 - 539295 + F 78 -16.5 -2.57564 | opp_overlap 539278, overlap 539258 GAAGTAATTCAGTCC CCTCAAGGGCTGGAGGCTC CGAAAAA GGGCCTCCAGCCTTTGGCG CTTGTGGAGCGCTGA TERM 438 539258 - 539288 + F 93 -16.2 -3.62591 | opp_overlap 539278, overlap 539251 TTCAGTCCCCTCAAG GGCTGGAGGCTC CGAAAAA GGGCCTCCAGCC TTTGGCGCTTGTGGA TERM 439 541645 - 541633 - g 72 -9.1 -4.07568 | GCTGCGTCCCGAAAA GCCCA TGG TGGGC ACGGGCATCGAGCGC Daci_0510 539519 - 543631 + | DNA-directed RNA polymerase, beta subunit TERM 440 544603 - 544575 - g 70 -12.3 -3.28712 | CTCGCTGCTGGACAA CGGCCGCCGTGGC AAG GCCATGACGGGCG CCAACAAGCGTGCCC TERM 441 545617 - 545601 - g 72 -9.4 -4.07568 | overlap 545612 GGTGCCGCCGCAAAA GGCCGA GATCA TCGGCC GTGCCGAAGCCGAGG TERM 442 545776 - 545766 - g 75 -6.8 -4.4078 | overlap 545768 GCTTGCCAAGGAAAA GGTC ATC GACC GCCACGGCAACGAAG Daci_0511 543655 - 547884 + | DNA-directed RNA polymerase subunit beta' TERM 443 547927 - 547958 + F 100 -18.1 -5.27938 | gap 1, opp_overlap 547922 CCTGAAGTGACGTGA CGCTCCCGGCCTGC CCAGC GCAGGC-GGGAGCG TTTTTCTTTGGGAAT Daci_0512 547966 - 548649 + | hypothetical protein TERM 444 548779 - 548832 + G 95 -22.6 -3.04792 | gap 3 AAGGCCAGTCCAGCC GCAGCGTGCTGG-CGCGCGTGGCGCAG CCG CTGCGCCCCG-GCGTCCAG-GCGCTGC TGTTCCAGGTACTGC Daci_0513 548646 - 550034 + | sun protein TERM 445 550052 - 550096 + F 75 -7.6 -4.25104 | gap 1, overlap 550055 CCCCCCATCGGGCCT GGTCGCCAGCCTGGCTGCGCC TGCT GGCGCGGCT-GGCCGGGGCGC TTTTGCTGGCCGGCG Daci_0514 550099 - 550662 + | putative proline rich signal peptide protein Daci_0515 550659 - 553001 + | PAS/PAC sensor signal transduction histidine kinase TERM 446 553402 - 553369 - g 73 -7.3 -4.21908 | gap 1 CATCACCATGCAAAA GCTGCTCAAGGCCGTG GAG CAGGGCCTGGCGC-GC AACGCCGCCAGCCAG TERM 447 553544 - 553566 + G 73 -12.6 -3.53224 | TTCGACCTGGACCGC CCGCTGCGCG AGG CGCGCGACGG TTTCGAGAAGGCCTA Daci_0516 553043 - 553714 + | two component Fis family transcriptional regulator TERM 448 553902 - 553871 - T 93 -7.2 -5.19261 | opp_overlap 553874, overlap 553860 553872 553874 AAATTCAGTAAAAAA TTACGGACTGCTTC GCAA GAAGCGGTCCGTTT TTCTTTGTGCCTCAG TERM 449 553901 - 553872 - T 73 -10.7 -3.6993 | opp_overlap 553874, overlap 553860 553871 553874 AATTCAGTAAAAAAT TACGGACTGCTTC GCAA GAAGCGGTCCGTT TTTCTTTGTGCCTCA TERM 450 553899 - 553874 - T 81 -13.3 -3.41701 | opp_overlap 553874, overlap 553860 553872 553871 TTCAGTAAAAAATTA CGGACTGCTTC GCAA GAAGCGGTCCG TTTTTCTTTGTGCCT TERM 451 553874 - 553899 + T 100 -15.5 -5.38958 | opp_overlap 553860 553872 553871 553874 TTCAGTAAAAAATTA CGGACTGCTTC GCAA GAAGCGGTCCG TTTTTCTTTGTGCCT Daci_0517 554287 - 553958 - | cupin 2 domain-containing protein Daci_0518 554572 - 555012 + | BadM/Rrf2 family transcriptional regulator Daci_0519 555009 - 555461 + | hypothetical protein TERM 452 555727 - 555750 + G 79 -11.7 -4.03234 | gap 1 GGCGTGTGCGCCGCC GCGCGCGTGG AACTG CC-CGCGCGC TTTGTGTGGCGCAGC TERM 453 556372 - 556394 + G 73 -16.2 -2.62263 | CGCATGGCGCGGCGC CGCCAGCCGC TGC GCGGCGGGCG TGATCTGGCGCAGCT Daci_0520 555532 - 559056 + | exodeoxyribonuclease V, gamma subunit TERM 454 562134 - 562148 + G 81 -7.1 -4.56597 | CCGGCCGGCGGGCCT GCGGT CTGGC ACCGC TTTTTGCGCGGCCCC Daci_0521 559053 - 562877 + | exodeoxyribonuclease V, beta subunit TERM 455 563018 - 562965 - g 73 -12.1 -3.53012 | overlap 562934 562966 CGCCGGGCGGCGAAA CGCCAGGCGACGCATCGCTGGGCGG CAAA CCGCCGGGCGCCGTGCCGCCAGACA CCAATGAACTGCTGG TERM 456 564492 - 564448 - g 72 -8.4 -4.07885 | gap 1 CAGGGCGCTTCAAAA CAGGCCGGCTGCG-GACGGCG ACTA CGAGGCCGCGCACCGGGCCTG GGTGATCGATGTGCT Daci_0522 562874 - 565081 + | exodeoxyribonuclease V, alpha subunit Daci_0523 565762 - 565100 - | glutathione S-transferase domain-containing protein Daci_0524 565882 - 566241 + | hypothetical protein Daci_0525 566338 - 566850 + | hypothetical protein TERM 457 567471 - 567427 - g 81 -10.1 -4.3534 | gap 3 CGGCAAGCAGGAAAA GCCGCAGGCCGCGCCCGCACAG CCCC CTGC-CGAGC-C-GCCTGCAGC TGCTGCGGCCGCTGC Daci_0526 566993 - 567949 + | hypothetical protein TERM 458 567962 - 567933 - f 76 -13.5 -3.01791 | gap 1, overlap 567919 AGGCGCCGGCCAAGA GCCGGCCGCCGCGC TGA GCGGGACGGC-GGC ACCCATGGATGGTCT TERM 459 568555 - 568584 + G 78 -5.8 -4.56775 | gap 2, overlap 568543 GCCGCACCGAGGACC TGCATGCGCAGCAT GCGG ATGC-GCGCG-GCA TTTTTAGCGGAGGCT Daci_0527 568026 - 569261 + | hypothetical protein Daci_0528 570616 - 569285 - | D-amino-acid dehydrogenase TERM 460 571072 - 571061 - H 88 -3 -5.47218 | GTTCATGTAAAAAAA CTAT TGAA ATAG AAAAAAACATGATTT TERM 461 571570 - 571583 + G 82 -3.8 -5.02074 | ATGCTCTCAATCGCC TGCC TGGTTT GGCA TTTTTTCGCAAGTGG TERM 462 574863 - 574831 - g 78 -8.4 -4.25104 | gap 2, overlap 574832 TTGTCTTCACCAAAA CGGGCGCGGGCACGAC CAC GCCG-G-CCGCACCCA CGTGCACGATCGCGG Daci_0529 571464 - 581093 + | Ig domain-containing protein TERM 463 581148 - 581120 - f 88 -19 -2.7419 | opp_overlap 581120, overlap 581108 581111 AGAGGAGCTGAACCA TCGCCTGCCGAA CCTGT TTCGGCAGGCGA TTTCCATTGGGCGCA TERM 464 581120 - 581148 + F 100 -19 -3.75153 | opp_overlap 581108 581120 581111 AGAGGAGCTGAACCA TCGCCTGCCGAA CCTGT TTCGGCAGGCGA TTTCCATTGGGCGCA TERM 465 581384 - 581404 + F 74 -11.9 -3.53012 | GTTCTGTCCTGATGT TCCGTTGCG CAC CGCAATGGA TTTCCGACCGACGCC Daci_0530 581400 - 584057 + | flavodoxin/nitric oxide synthase TERM 466 584137 - 584094 - T 76 -10 -3.75665 | opp_overlap 584133, overlap 584082 584095 584126 GCACAGCGCATGAAA CCGGCGCGGCCCAAGTCAGG GACA CCTAGCAAGGGCCGCCCCGC CGCGAGGGTGTCGTC TERM 467 584136 - 584095 - T 75 -13.5 -2.85078 | opp_overlap 584133, overlap 584082 584094 584126 CACAGCGCATGAAAC CGGCGCGGCCCAAGTCAGG GACA CCTAGCAAGGGCCGCCCCG CCGCGAGGGTGTCGT Daci_0531 585370 - 584210 - | uncharacterized peroxidase-related enzyme TERM 468 584939 - 584902 - G 74 -15.6 -3.02144 | opp_overlap 584929, overlap 584924 GCACGCCCGCGAACA GGCGCAACTGGTAGGC GATGAA GCCCACCAGCTGGGCC ACCAGCACGGTGTCG Daci_0532 586859 - 585378 - | FAD dependent oxidoreductase TERM 469 585633 - 585645 + g 72 -6.9 -4.26076 | overlap 585624 585623 GTCCAGGCCGGGCAG GGCGC CGG GCGTC TTTTCCTGGAACTCG TERM 470 586675 - 586643 - G 100 -18.4 -4.25104 | CCTTGTCCAGCAAAA CGGCCGCGATGCCC AGCTG GGACAGCGCGGCCG ACAGGGCCAGGCCGG TERM 471 586919 - 586886 - R 76 -10.8 -3.80461 | overlap 586887 GAACTCACGAGGAAA GGCGCGCCAGCGGG GCAGGG CCTGCGGGCGCGCG CGGCATCAATCGATG TERM 472 586918 - 586887 - R 79 -14.3 -2.87794 | overlap 586886 AACTCACGAGGAAAG GCGCGCCAGCGGG GCAGGG CCTGCGGGCGCGC GCGGCATCAATCGAT Daci_0533 587959 - 586925 - | hypothetical protein TERM 473 588053 - 588071 + r 74 -13.1 -3.14132 | opp_overlap 588053 AGCGCTCAGCAAAAA GCCCGCC GATGG GGCGGGC TTCATGCCGGGCGCA TERM 474 588071 - 588053 - R 100 -13.1 -4.7254 | opp_overlap 588053 AGCGCTCAGCAAAAA GCCCGCC GATGG GGCGGGC TTCATGCCGGGCGCA Daci_0534 588484 - 588095 - | hypothetical protein Daci_0535 589407 - 588667 - | XRE family transcriptional regulator Daci_0536 589522 - 590346 + | hypothetical protein TERM 475 590463 - 590477 + G 78 -12.8 -3.78934 | overlap 590448 GCCCTGCTGGGCCAG CGGCGC TTT GCGCCG TTCTTCTGGACGCAG TERM 476 591399 - 591410 + G 82 -3.6 -5.00616 | overlap 591368 591366 GCTTCCGAGCTGATG GGCG TGGG TGCC TTTTTTGCCCAGCCC Daci_0537 590358 - 592322 + | phospholipid/glycerol acyltransferase Daci_0538 593503 - 592319 - | saccharopine dehydrogenase TERM 477 592666 - 592676 + g 72 -8.2 -4.07687 | overlap 592661 CCACGGCGTTGGCCA GGGC CTC GCCC TTTTCGCCCGCGCCT Daci_0539 593814 - 594287 + | YiaAB two helix domain-containing protein TERM 478 594726 - 594744 + G 70 -12.4 -3.33696 | CGTTGTCATCTCGGC GGCCGGCA AGG TGCTGGCC TTCATTCCCAACGAG Daci_0540 594325 - 594795 + | hypothetical protein Daci_0541 594804 - 595622 + | hypothetical protein Daci_0542 595690 - 596814 + | hypothetical protein Daci_0543 596924 - 598186 + | diguanylate cyclase TERM 479 598844 - 598868 + G 70 -8.5 -3.9122 | overlap 598859 GGTGCTCGGTGCCGT GGTGCGCTGCA GCG TGCAGGCCACC TTCTTTCGCAGCATG Daci_0544 598230 - 599474 + | diguanylate cyclase Daci_0545 599595 - 600365 + | hypothetical protein Daci_0546 601393 - 600395 - | hypothetical protein TERM 480 601168 - 601178 + g 72 -4.6 -4.52589 | overlap 601153 601162 CGATGGTGCCCGAGG CGCC CAC GGTG TTTTCTATGACCACG Daci_0547 602520 - 601390 - | hypothetical protein TERM 481 602110 - 602064 - G 77 -17.9 -2.62184 | CGTCGCCGTACATCA CCTCGCCGGGCCCGTGCGCGG TGCCG CCGGGCACGCGCTCGGCAAAG CCCGCAGGCACGGGC TERM 482 603476 - 603492 + G 86 -13.7 -3.86015 | opp_overlap 603474 603478 TCGGCTACACCAAGG CAGCCGC CAT GCGGCTG TTTCTGGACGAGCTG Daci_0548 602632 - 603582 + | LysR family transcriptional regulator Daci_0549 604791 - 603619 - | queuine tRNA-ribosyltransferase Daci_0550 604927 - 605397 + | UspA domain-containing protein Daci_0551 605873 - 605421 - | hypothetical protein Daci_0552 607261 - 606041 - | phospholipase A1 Daci_0553 607796 - 607350 - | hypothetical protein Daci_0554 609973 - 607856 - | UvrD/REP helicase Daci_0555 610207 - 610953 + | hypothetical protein Daci_0556 610950 - 611513 + | Miro domain-containing protein Daci_0557 611510 - 611911 + | hypothetical protein Daci_0558 612011 - 612370 + | hypothetical protein TERM 483 612400 - 612424 + F 100 -12.9 -5.75342 | TGCGCTCACGCCCGA CCTGCCGGA TGCGGAT TCCGGCAGG TTTTTTTTCGCCCGG TERM 484 613177 - 613158 - g 74 -13.6 -3.25823 | GCGCTCGCAGATGAA CAGCCACG AGCG CGTGGCTG CGCGCGACTACGTGC Daci_0559 612499 - 613449 + | auxin efflux carrier Daci_0560 613551 - 615170 + | glycosyltransferase Daci_0561 615167 - 616171 + | glycosyl transferase family protein TERM 485 616195 - 616221 + G 72 -14.4 -3.23216 | GACGTGATCGCACAG CTGCGCCGCCTG CCG CAGGCGCTGCAG TTCGTGCTGGTAGGG Daci_0562 616174 - 616596 + | GtrA family protein Daci_0563 616593 - 617459 + | YdjC family protein TERM 486 617478 - 617499 + T 74 -11.5 -3.53012 | opp_overlap 617478 GCGGCAATAGAAAAA GCCCGGCCA AAAA TGACCGGGC TTTCAGGGCGCAACG TERM 487 617499 - 617478 - T 100 -13.7 -5.0916 | opp_overlap 617478 GCGGCAATAGAAAAA GCCCGGCCA AAAA TGACCGGGC TTTCAGGGCGCAACG Daci_0564 618779 - 617643 - | L-asparaginase, type II TERM 488 618947 - 618969 + r 80 -4 -5.01732 | CTTTGCGGGATTGCG CCCAAGGCCT GAA AGGCTTGAGG TTTTTTGGGGCCGTT Daci_0565 621291 - 619003 - | primosomal protein N' TERM 489 620236 - 620292 + g 70 -12.4 -3.25729 | gap 4 GCCCAGGATGACCTT GGCGC-CGGTA-TCGCGCGCGCG-CCAG ATGGC CAGGTCGCGCGC-CGAGTAGCGTGCGCC TTCCTGCTGCTTGTA TERM 490 620778 - 620796 + g 71 -11.7 -3.53779 | opp_overlap 620756, overlap 620756 620762 GTGCAGGCGCACTGC CAGGCGC CTGTT GCGCCTG TTCCTCTTTTGCAGC TERM 491 621271 - 621245 - G 79 -11.4 -4.07687 | overlap 621231 AGCGGGGCCTGAAAA CGCGGGCGCCGC ACG GCAGGGCCTGCG GCAACCAAGCCGCCA TERM 492 621548 - 621566 + r 75 -3 -4.99035 | GATGACAACTGCAAC TCCTAGGG CCT CGCTCGGA TTTTTCTGTGCATAA Daci_0566 622852 - 621740 - | uroporphyrinogen decarboxylase TERM 493 623266 - 623254 - g 71 -10.5 -3.78934 | GGTGGTGGAGAACAA GCCCG GCG CGGGC GGCCGCCTGTCGGCC Daci_0567 623030 - 624019 + | hypothetical protein TERM 494 624049 - 624034 - f 81 -6 -4.84017 | opp_overlap 624035, overlap 624035 AACCTTCGACAAAAA TGGCCC GTGC GGGCCT TTTTTCATCGCCGGG TERM 495 624035 - 624048 + F 100 -9.5 -5.14563 | opp_overlap 624034 624035 ACCTTCGACAAAAAT GGCCC GTGC GGGCC TTTTTTCATCGCCGG TERM 496 624099 - 624083 - f 100 -11.5 -4.87626 | opp_overlap 624084 624085, overlap 624084 CCCCAAGATGAAAAA CGCCCCC TCG GGGGGCA GCGTGGGGGTCATTT TERM 497 624098 - 624084 - f 79 -12.8 -3.51853 | opp_overlap 624084 624085, overlap 624083 CCCAAGATGAAAAAC GCCCCC TCG GGGGGC AGCGTGGGGGTCATT TERM 498 624181 - 624200 + F 73 -9.4 -3.88438 | opp_overlap 624179 624181 GTCTGGCGACTAACA TTTACCGA CCAT TCGGTAAA TTATGTTTGATCTGC Daci_0568 624251 - 625033 + | enoyl-CoA hydratase/isomerase TERM 499 625251 - 625263 + G 71 -10.5 -3.71873 | CTTCATCACGGCGCT GGCCG ACA CGGCC TTTGCCTATGCCTGC Daci_0569 625045 - 625512 + | phenylacetic acid degradation protein PaaD Daci_0570 625524 - 626828 + | phenylacetate-CoA ligase Daci_0571 626846 - 627505 + | TetR family transcriptional regulator TERM 500 627705 - 627678 - g 78 -12 -3.7941 | gap 1 CATTCCCGAGAAGAA CACCGTGGCGCTG ATG CCGCGC-ACGGTG GCGGGCCAGAAGGTC Daci_0572 627541 - 628692 + | extracellular ligand-binding receptor TERM 501 629000 - 629054 + G 70 -12.7 -3.29947 | gap 1 GGCCGCCGCCGTGCT GGTGGTGGACCTGCTGCGCTGGC-GC GCGG GCAGCCAGGTGAGCTGGCCCGCCACC TTCCTGTGGTGCCTG Daci_0573 628776 - 629804 + | inner-membrane translocator TERM 502 631510 - 631466 - g 83 -8.3 -4.59773 | opp_overlap 631485 631499 CGCCACCTGGAAAAA CAGGCCCTGGCCGACCTGCTG CGC CAGCTGCGCGCCGAGGGGCTG GGCATTCTCGTCGTC Daci_0574 629801 - 631693 + | ABC transporter related Daci_0575 631690 - 632436 + | ABC transporter related Daci_0576 632450 - 632833 + | hypothetical protein TERM 503 633437 - 633452 + T 77 -3.4 -5.0133 | opp_overlap 633442 GATCAAGACTGCCAA TAATAT AATT ATATTA TTTTTTGAAGACATA Daci_0577 634557 - 633469 - | hypothetical protein TERM 504 633797 - 633809 + g 77 -3.4 -4.79451 | overlap 633794 TAAGCGCTCAATGTG TAGG ATGCA CCTA TTTTGTATTTGACAT Daci_0578 636573 - 635590 - | hypothetical protein TERM 505 636087 - 636115 + g 82 -8.8 -4.49756 | gap 1 GGTGGGGGCTGCCCA GGCCGGC-CGAGC CCCA GCTCACGCCGGTC TTTTGCTGTTTGGCC Daci_0579 638740 - 637064 - | hypothetical protein TERM 506 637894 - 637910 + g 86 -3.6 -5.1244 | overlap 637854 637853 GGGCGCGGATGCGCG GCACGA TGTTC TCGGGC TTTTTCTCTTCCTCG TERM 507 638805 - 638778 - R 91 -5.4 -5.41143 | gap 1, overlap 638779 638780 CAGTGTGGAAAAAAA GGGCGCAGCCATC CCC GCCGGC-GCGCCA GGGCGCCGGTTCACG TERM 508 638804 - 638779 - R 71 -8.9 -3.83963 | gap 1, overlap 638778 638780 AGTGTGGAAAAAAAG GGCGCAGCCATC CCC GCCGGC-GCGCC AGGGCGCCGGTTCAC Daci_0580 639839 - 638874 - | beta-lactamase domain-containing protein TERM 509 639863 - 639874 + H 72 -3 -4.85599 | opp_overlap 639868 TGCTTTTGAGATGGA CAAA TGCA TTTG TTTTTATCGAATGCC Daci_0581 639914 - 640807 + | IclR family transcriptional regulator Daci_0582 642659 - 640827 - | methyl-accepting chemotaxis sensory transducer TERM 510 642117 - 642102 - G 72 -8.2 -3.96327 | ACGGCTGACCACAAA GCCCAG GCTG CCGGGC GTCGGGCGGATGGCG Daci_0583 642838 - 643800 + | putative hemolysin-like protein TERM 511 644008 - 644034 + T 100 -18 -4.7254 | TCCACGCCAATTGCA GGCCGCAGCCTT TCA GGGGCTGCGGCC TTTTTCATGGGCAAT Daci_0584 644584 - 644057 - | CoA-binding domain-containing protein Daci_0585 645824 - 644553 - | Na+/H+ antiporter NhaA TERM 512 645195 - 645179 - GR 82 -15.1 -3.17229 | overlap 645138 645177 ACTGCAGCAGGAACA CGCCGGC CAG GCCGGCG GCGGCCACCAGCAGC TERM 513 645855 - 645840 - R 82 -11.8 -3.8901 | GTGCAAAGCAGCAAA GGGGCC TTGC GGCCCC GGTGCGCAGGCGGCC TERM 514 645970 - 645991 + r 100 -12.9 -4.74103 | TGCTGCGCAAGGTCC GCTGCCCCC CCGA GGGGGCCGC TTTTTGCCTTGGGGC TERM 515 646034 - 646024 - R 75 -2.4 -5.00616 | opp_overlap 646007 CCCGGCGGCAAAAAA TCGG CGG CCGG GACTCTTGCGCAAGA Daci_0586 646593 - 646060 - | hypothetical protein Daci_0587 649183 - 646787 - | cytochrome c biogenesis protein transmembrane region TERM 516 647576 - 647540 - G 74 -12.1 -3.60296 | overlap 647561 CATGTCGATGGCAAA GCCCAGCGAGGCGCC CATGAAC GGCGCCGTGCAGGGC GAGGCAATGGCCACG Daci_0588 649272 - 650249 + | hypothetical protein Daci_0589 650291 - 651154 + | creatininase TERM 517 651435 - 651410 - T 78 -14.1 -3.25223 | gap 1, overlap 651414 GAGTCAGATCACGAA GCAAGCCTGTCC TTC GG-CAGGCTTGC AACCCCGCAACCGCC Daci_0590 652487 - 651513 - | hypothetical protein TERM 518 652302 - 652322 + g 78 -6.7 -4.56597 | GTCGATGATGACGGG CTGGCCCAG CTG CGAGGCCAG TTTTTGCGCGACGAC Daci_0591 653290 - 652607 - | phosphoglycerate mutase TERM 519 653303 - 653322 + r 73 -9.2 -3.96148 | overlap 653304 CATGGCGCGGATTGT GGCCAGCG CCGG CGCTGGCG TTTGTCCTGCGGGCG TERM 520 653304 - 653321 + r 70 -12.7 -2.97475 | overlap 653303 ATGGCGCGGATTGTG GCCAGCG CCGG CGCTGGC GTTTGTCCTGCGGGC Daci_0592 654337 - 653378 - | PhzF family phenazine biosynthesis protein TERM 521 654409 - 654370 - R 84 -10.1 -4.21462 | AGGGAGGATGGAAAA GCCGACA-GCAAGCCGGAC TTTG GTTCGAC-TGCGTGTCGGC TTCCCCCTGGCCCAA Daci_0593 655914 - 654562 - | GntR family transcriptional regulator Daci_0594 656577 - 655975 - | lysine exporter protein LysE/YggA TERM 522 657001 - 657013 + G 71 -10.5 -3.71848 | opp_overlap 657009 CCTGGTCGAGGCGCG GCCGC AAA GCGGC TTCTTCGTGCGCGAC Daci_0595 656795 - 658246 + | transcriptional regulator Daci_0596 659173 - 658460 - | RNA polymerase, sigma 28 subunit, FliA/WhiG Daci_0597 660060 - 659179 - | hypothetical protein Daci_0598 661699 - 660053 - | GTP-binding signal recognition particle TERM 523 661511 - 661544 + g 71 -11.8 -3.56704 | overlap 661508 AGAGCGGCGCTCGAT GGCCTGCTG-CAGCGG CGTG CTGCTGGCAGC-GGCC TTGCTTTGCTCCAGC Daci_0599 663795 - 661696 - | flagellar biosynthesis protein FlhA TERM 524 663176 - 663153 - G 76 -13.2 -3.45023 | gap 1 TCACCAGGATCAGAA TGC-CGGCGAC CGC GTCGCCGCGCA CGAACTTGCTGGCAC Daci_0600 664967 - 663792 - | type III secretion exporter TERM 525 665181 - 665160 - R 75 -13.7 -2.90075 | gap 1 TGCCCTGCAATGAGA GGGGAGGCGC CGG GCGCC-CCCC GGGGTGATCAGAATC Daci_0601 665803 - 665189 - | chemotaxis phosphatase, CheZ Daci_0602 666200 - 665814 - | response regulator receiver protein Daci_0603 667362 - 666325 - | OmpA/MotB domain-containing protein TERM 526 666444 - 666478 + g 85 -17.9 -3.1247 | gap 1 CCGCATTCGCCGTGC CGCCATTGCCGCCCGC CAAT GAGGGCGGCAA-GGCG TTGCGTGTCACGGGT Daci_0604 668247 - 667387 - | MotA/TolQ/ExbB proton channel TERM 527 667962 - 667978 + g 75 -9.3 -4.10657 | opp_overlap 667962 TTTCGATGGACATCA GGCCCTC CTT GCGGGCC TTTTGCAGAATCTCG Daci_0605 668623 - 670284 + | tetratricopeptide domain-containing protein TERM 528 670767 - 670750 - g 72 -5.5 -4.41241 | opp_overlap 670750 GAAATTTCGAGAAAA TCACGGG CTTG CCTGTGA TTGTTGATGCAGCAG TERM 529 670814 - 670827 + G 71 -2.3 -4.62783 | overlap 670815 ATGGCTGAATGGAGC ACAGG GAAC CCTGG TTTTTAGCATGCATG Daci_0606 670281 - 671486 + | DegT/DnrJ/EryC1/StrS aminotransferase Daci_0607 672108 - 671524 - | hypothetical protein Daci_0608 673125 - 672157 - | hypothetical protein TERM 530 673166 - 673152 - R 73 -4.2 -4.66833 | opp_overlap 673154, overlap 673154 TCTGAATTCGAAAAA CAGGGT GTC ACCCTT ATTGAGCTCTACGGG Daci_0609 673793 - 673128 - | methyltransferase type 11 TERM 531 673324 - 673354 + g 87 -5.6 -5.15634 | GGTAGAAAATGTTTG TAGTGCCATATA TATCCGT TGTATGGCATTA TTTTTTCATGCGGTG Daci_0610 674974 - 673829 - | Rieske (2Fe-2S) domain-containing protein Daci_0611 675629 - 674979 - | acetyltransferase Daci_0612 676366 - 675629 - | short-chain dehydrogenase/reductase SDR Daci_0613 677124 - 676363 - | short-chain dehydrogenase/reductase SDR Daci_0614 678158 - 677121 - | Beta-ketoacyl-acyl-carrier-protein synthase I Daci_0615 678388 - 678164 - | acyl carrier protein-related protein Daci_0616 678625 - 681549 + | TPR repeat-containing protein TERM 532 681595 - 681557 - f 74 -12.5 -3.1855 | gap 1, opp_overlap 681556, overlap 681560 TTTTGTAACAGCGAA CCATGCACCGCGCGG-AT GGCC ATGCCGCGCGGTGCAAAA AATCTTGTGAAGTCC TERM 533 681592 - 681560 - f 86 -18.6 -2.7898 | gap 1, opp_overlap 681556, overlap 681557 TGTAACAGCGAACCA TGCACCGCGCGG-AT GGCC ATGCCGCGCGGTGCA AAAAATCTTGTGAAG Daci_0617 681798 - 682649 + | flagellin domain-containing protein TERM 534 682661 - 682695 + F 72 -11.4 -3.28712 | overlap 682662 CTGATCGCAGTACGA GTCCGGCTGCCTTC CCAAGCA GGAGGCGGCCGGAA TTCTCCAGGCCCCAG TERM 535 682662 - 682694 + F 76 -14.9 -2.57132 | overlap 682661 TGATCGCAGTACGAG TCCGGCTGCCTTC CCAAGCA GGAGGCGGCCGGA ATTCTCCAGGCCCCA TERM 536 682705 - 682724 + F 100 -15 -5.60993 | CCGGAATTCTCCAGG CCCCAGGC ATCT GCCTGGGG TTTTTTTATGGCCGA Daci_0618 682941 - 683813 + | flagellin domain-containing protein TERM 537 684218 - 684244 + G 71 -11.5 -3.64703 | opp_overlap 684216 684232 GGCGCCTGACCAATG CTGCCACGACC AATTC GGCCGTGGCGG TTTCGGTCACGGACG Daci_0619 683995 - 685416 + | flagellar hook-associated 2 domain-containing protein TERM 538 685651 - 685641 - g 75 -4.6 -4.57073 | GACGCGCTCGAAAAA GCGC TGA ACGC GGCCAAGGGAGCCAT Daci_0620 685521 - 685934 + | flagellar protein FliS Daci_0621 685937 - 686236 + | flagellar protein FliT TERM 539 686292 - 686310 + T 100 -14.6 -5.60993 | opp_overlap 686292 CCGGCCATAAAAAAA CCGCCTGA TGT TCAGGCGG TTTTTTTATGGGCGG TERM 540 686310 - 686292 - T 100 -14.6 -5.60993 | opp_overlap 686292 CCGGCCATAAAAAAA CCGCCTGA TGT TCAGGCGG TTTTTTTATGGGCGG Daci_0622 687672 - 686380 - | putative signal transduction protein Daci_0623 688893 - 687694 - | flagellar hook-associated protein 3 Daci_0624 690845 - 688917 - | flagellar hook-associated protein FlgK Daci_0625 691855 - 690893 - | flagellar rod assembly protein/muramidase FlgJ TERM 541 691737 - 691771 + g 90 -16.5 -3.68619 | gap 1 TGCTTGGCGGTTTCC TTCGCGGCCTGCG-GA CTGT TCTCGCCGGCCGCGAA TTTGAGTGCGTTGAG Daci_0626 693000 - 691852 - | flagellar basal body P-ring protein TERM 542 692298 - 692332 + g 77 -15.7 -3.14132 | GCACGGTGCGCCCGT CCAGCGCCTGTGCCA CGCCC TGGCCCATGCGCTGG TTGATGGCGCGCACC Daci_0627 693728 - 693021 - | flagellar L-ring protein TERM 543 693082 - 693048 - G 79 -7.1 -4.42235 | gap 1, overlap 693045 693069 AACGTTCAAAAAGAA CCGGGACAAC-CAGCC AATT GACTGCGCTTCCCCGG CCTGTCCGCGGCTGC Daci_0628 694712 - 693930 - | flagellar basal-body rod protein FlgG Daci_0629 695475 - 694735 - | flagellar basal-body rod protein FlgF Daci_0630 696776 - 695505 - | flagellar basal body FlaE domain-containing protein TERM 544 696387 - 696342 - G 100 -18.3 -3.90112 | gap 1, overlap 696344 CTGGCCCGAAGGAAA GACCATGGGCACGG-GCTGGCC GCC GGCCAGCACCTTGCCCGTGGTG GCGTCCACGGGGTAG TERM 545 696385 - 696344 - G 100 -20.9 -3.54146 | gap 1, overlap 696342 GGCCCGAAGGAAAGA CCATGGGCACGG-GCTGGCC GCC GGCCAGCACCTTGCCCGTGG TGGCGTCCACGGGGT Daci_0631 697479 - 696817 - | flagellar hook capping protein Daci_0632 697918 - 697514 - | flagellar basal-body rod protein FlgC Daci_0633 698431 - 697949 - | flagellar basal-body rod protein FlgB Daci_0634 698597 - 699361 + | SAF domain-containing protein TERM 546 699505 - 699458 - g 75 -5.4 -4.6644 | gap 1, overlap 699449 699460 AAGATAGGTCAAAAA CCGGAACTGCCC-GCCGCTGCCT CCC AGGCCGCCGCCAAGCAGCCCAAG ACAGCCAGCACCATT Daci_0635 699440 - 699760 + | putative anti-sigma-28 factor, FlgM TERM 547 699743 - 699772 + F 76 -9.2 -4.13814 | overlap 699744 TCCGAAGAATTCCTC TCGCACTCGCGC GTCTGA GCGCGGGTTCGG TTCTTTCTCGGTTTT TERM 548 699797 - 699810 + F 100 -9.5 -5.04249 | GGTTTTTTCCTTCCG GCGCG AGCA CGCGC TTTCTTTTTTCAGCA Daci_0636 699837 - 700208 + | hypothetical protein TERM 549 700256 - 700279 + T 100 -12.4 -4.89567 | CTTCCCGCTGCTCAA CCCTCCGGCA TCCG TGCCCGAGGG TTTTGTCTTTTCCGG Daci_0637 700982 - 700653 - | flagellar hook-basal body complex subunit FliE Daci_0638 701148 - 702848 + | flagellar M-ring protein FliF TERM 550 703509 - 703487 - g 71 -10.4 -3.76482 | overlap 703465 CGAGATGATCAACAA CCTCGGCGGC AAT GCCGACGTGG CCGTGCTGGACACCA Daci_0639 702876 - 703871 + | flagellar motor switch protein FliG TERM 551 704026 - 704082 + G 71 -11.6 -3.55071 | gap 4 CCCGCCGCATCCGGT GCCCAGGCTGCGCATGGC-GGCGCGGGC ATGGC GCGCGCGCCTGCC-TCCGC-GTC-GGGC TTTCACAGCCTGTCG Daci_0640 703864 - 704775 + | flagellar assembly protein FliH Daci_0641 704765 - 706207 + | flagellar protein export ATPase FliI Daci_0642 706273 - 706737 + | flagellar export protein FliJ TERM 552 706941 - 706957 + G 71 -11.5 -3.56643 | overlap 706901 CCAGGCCTTGGGCGA GGGCGGC AGT GCCGCTC TTTCCGCGCTGTCCA TERM 553 707248 - 707304 + G 72 -13.6 -3.14132 | TGGCTGTCCGGCCGG GGCAGCG-CCGCCATGATGGCCCTGCGC CAG GAGCAGGGC-GCCGTGGCGCACGCGGCC TTCCTGGCACCGCAG TERM 554 707772 - 707793 + G 73 -12.3 -3.53012 | gap 1, opp_overlap 707784 707785 CCTGGGCCAGCAGGC GGCCG-GCCA AAA TGGCGCGGCC TTTGCCCAGCCCGAC Daci_0643 706741 - 708252 + | flagellar hook-length control protein TERM 555 708302 - 708342 + F 86 -13.2 -3.53811 | opp_overlap 708307 CCGTTTCAGGGTTTT CACAACAGGCCGGGTGGC GACAA GCTGTCCGGCCTGTGGCG TTTGAGGGCCATCAA Daci_0644 708506 - 709081 + | flagellar basal body-associated protein FliL Daci_0645 709100 - 710104 + | flagellar motor switch protein FliM Daci_0646 710094 - 710525 + | flagellar motor switch protein FliN Daci_0647 710536 - 710871 + | flagellar biosynthesis protein FliO Daci_0648 710864 - 711649 + | flagellar biosynthesis protein FliP Daci_0649 711677 - 711946 + | flagellar biosynthetic protein FliQ Daci_0650 711976 - 712746 + | flagellar biosynthetic protein FliR Daci_0651 713424 - 712795 - | two component LuxR family transcriptional regulator TERM 556 712841 - 712854 + g 72 -3.8 -4.56597 | GTGAGTTCGGCATTG CTGC TCATCT GCAG TTTTTCCAGCACGCG Daci_0652 714612 - 713464 - | response regulator receiver sensor signal transduction histidine kinase Daci_0653 714732 - 715178 + | hypothetical protein Daci_0654 715231 - 715593 + | response regulator receiver protein Daci_0655 715633 - 717831 + | CheA signal transduction histidine kinase TERM 557 717892 - 717857 - f 100 -19.8 -3.42078 | gap 1 GATACCTGACCACAA TCGACGGCGCCGCAGGC AGT GCCTGCG-CGCCGCCAA GAAACCATGGCCTGC TERM 558 717928 - 717897 - f 75 -8.6 -4.15044 | gap 1, overlap 717900 CGCGCCGCCAAGAAA CCATGGCCTGCGCCA CCA CGGCGCGGGCC-CGA CAGTTGAGGAGCTGA TERM 559 718079 - 718059 - g 74 -11.1 -3.74747 | TGAAGGTGCAGGAAA TCCGCGGCT ACG AGCCGCCGA CCCGCATCGCCAATG Daci_0656 717947 - 718435 + | CheW protein TERM 560 718920 - 718938 + G 74 -12.4 -3.59979 | GACGGCGCTGGAAGC GCTGGGTG CCA CGCCCAGC TTTCAGCTGCAGGCC TERM 561 719029 - 719046 + G 76 -2.5 -4.72272 | opp_overlap 719020 719019, overlap 719019 ATCAAGGGCATGAGC GCCGAGC GCCT GCACCGC TTTTTCCTGCGGGGA Daci_0657 718462 - 719352 + | MCP methyltransferase, CheR-type Daci_0658 719386 - 720123 + | chemoreceptor glutamine deamidase CheD Daci_0659 720139 - 721272 + | response regulator receiver modulated CheB methylesterase TERM 562 721323 - 721309 - T 100 -11.4 -5.14563 | opp_overlap 721309 GCCTCCATGAAAAAA GAGCGC ATG GCGCTC TTTTTTTTCAGTTCG TERM 563 721309 - 721323 + T 100 -11.4 -5.86332 | opp_overlap 721309 GCCTCCATGAAAAAA GAGCGC ATG GCGCTC TTTTTTTTCAGTTCG Daci_0660 723228 - 721348 - | ABC transporter related TERM 564 721650 - 721689 + g 70 -12.8 -3.36273 | gap 1 CCTCGGCCAGATCCT GGCTGCG-GCGCGACTGGT CCA GCCAGTCCTGCACGCCGCC TTCGTATTCGCGCCA TERM 565 723325 - 723276 - R 78 -14.1 -3.18264 | gap 1, opp_overlap 723282, overlap 723277 TCGTGCAGGCAGCAA GGCCTCCCCGCCCGGAGCCTGCCC GCA GGGCAGGCTCCGGGCCGGTTT-CA GAGGGCGGGGCGGTG TERM 566 723324 - 723277 - R 83 -17.6 -2.50816 | gap 1, opp_overlap 723282, overlap 723276 CGTGCAGGCAGCAAG GCCTCCCCGCCCGGAGCCTGCCC GCA GGGCAGGCTCCGGGCCGGTTT-C AGAGGGCGGGGCGGT TERM 567 723282 - 723320 + r 100 -31.8 -3.53012 | opp_overlap 723277 723276 AGGCAGCAAGGCCTC CCCGCCCGGAGCCTGCCC GCA GGGCAGGCTCCGGGCCGG TTTCAGAGGGCGGGG TERM 568 723466 - 723456 - R 74 -5.4 -4.43844 | CGATGAGTCAGAAAA GTCT TGT AGAC AGCACGGAAAAACGT TERM 569 723729 - 723760 + r 84 -6 -4.92314 | gap 1, opp_overlap 723735 723737 723740, overlap 723725 723731 723732 AGCCAAAAACGCTCA TGAGAATAGAAGTGA AGT TCACTTCAATTC-CG TTTTTATGAGTTAGT TERM 570 724067 - 724057 - R 71 -5.4 -4.36914 | GTTGGTGGGATAAAA GCTT ACC AAGC CGACGATCTGTAGCT TERM 571 724267 - 724247 - R 77 -3.9 -4.88407 | GTACGGAACGAAAAA GCTTCTCCT AAT ACGAGAGGC CCATGACGGTACCGT TERM 572 725682 - 725727 + r 93 -16.6 -3.32343 | gap 2, opp_overlap 725687 725689 725694, overlap 725683 725687 725694 TGCTATAATATTTGA C--TCAACACTAAAGCAGTCTC GTGT GAGACTGCTTTAGTGTTGATAG TTATCCAACTATCAA TERM 573 725683 - 725724 + r 100 -26.3 -2.83449 | opp_overlap 725687 725689 725694, overlap 725682 725687 725694 GCTATAATATTTGAC TCAACACTAAAGCAGTCTC GTGT GAGACTGCTTTAGTGTTGA TAGTTATCCAACTAT TERM 574 725687 - 725720 + r 100 -21.3 -3.30474 | opp_overlap 725687 725689 725694, overlap 725683 725682 725694 TAATATTTGACTCAA CACTAAAGCAGTCTC GTGT GAGACTGCTTTAGTG TTGATAGTTATCCAA TERM 575 725720 - 725687 - R 100 -21.3 -3.0792 | opp_overlap 725687 725683 725682 725694, overlap 725689 725694 TAATATTTGACTCAA CACTAAAGCAGTCTC GTGT GAGACTGCTTTAGTG TTGATAGTTATCCAA TERM 576 725718 - 725689 - R 89 -18.1 -3.09505 | opp_overlap 725687 725683 725682 725694, overlap 725687 725694 ATATTTGACTCAACA CTAAAGCAGTCTC GTGT GAGACTGCTTTAG TGTTGATAGTTATCC TERM 577 725694 - 725713 + r 86 -12.2 -3.95424 | opp_overlap 725689 725687 725694, overlap 725687 725683 725682 TGACTCAACACTAAA GCAGTCTC GTGT GAGACTGC TTTAGTGTTGATAGT TERM 578 725713 - 725694 - R 86 -12.2 -3.93782 | opp_overlap 725694 725687 725683 725682, overlap 725689 725687 TGACTCAACACTAAA GCAGTCTC GTGT GAGACTGC TTTAGTGTTGATAGT TERM 579 726307 - 726292 - R 70 -3.2 -4.65078 | AGACGGTTAACAAAA CGGAAT GGAA AGTCCG GCCATAGTAGGTGAT TERM 580 726491 - 726480 - R 71 -7.2 -4.2354 | GAAAGGCGAAAAGAA CCCC GGGA GGGG AGTGAAATAGATCCT TERM 581 729124 - 729153 + r 93 -16.5 -3.51137 | opp_overlap 729129, overlap 729129 TCAGGCTCTTACAGC CAAAACGCCCGGC TAGC GCCGGGCGTTTTC TTCTCTACCCTGCTT TERM 582 729148 - 729129 - R 100 -16.4 -4.2349 | opp_overlap 729129 729124 CTCTTACAGCCAAAA CGCCCGGC TAGC GCCGGGCG TTTTCTTCTCTACCC TERM 583 729129 - 729148 + r 100 -16.4 -4.84311 | opp_overlap 729129, overlap 729124 CTCTTACAGCCAAAA CGCCCGGC TAGC GCCGGGCG TTTTCTTCTCTACCC TERM 584 729375 - 729406 + r 84 -6 -4.92314 | gap 1, opp_overlap 729381 729383 729386, overlap 729371 729377 729378 AGCCAAAAACGCTCA TGAGAATAGAAGTGA AGT TCACTTCAATTC-CG TTTTTATGAGTTAGT TERM 585 729713 - 729703 - R 71 -5.4 -4.36914 | GTTGGTGGGATAAAA GCTT ACC AAGC CGACGATCTGTAGCT TERM 586 729913 - 729893 - R 77 -3.9 -4.88407 | GTACGGAACGAAAAA GCTTCTCCT AAT ACGAGAGGC CCATGACGGTACCGT TERM 587 731328 - 731373 + r 93 -16.6 -3.32343 | gap 2, opp_overlap 731333 731335 731340, overlap 731329 731333 731340 TGCTATAATATTTGA C--TCAACACTAAAGCAGTCTC GTGT GAGACTGCTTTAGTGTTGATAG TTATCCAACTATCAA TERM 588 731329 - 731370 + r 100 -26.3 -2.83449 | opp_overlap 731333 731335 731340, overlap 731328 731333 731340 GCTATAATATTTGAC TCAACACTAAAGCAGTCTC GTGT GAGACTGCTTTAGTGTTGA TAGTTATCCAACTAT TERM 589 731333 - 731366 + r 100 -21.3 -3.30474 | opp_overlap 731333 731335 731340, overlap 731329 731328 731340 TAATATTTGACTCAA CACTAAAGCAGTCTC GTGT GAGACTGCTTTAGTG TTGATAGTTATCCAA TERM 590 731366 - 731333 - R 100 -21.3 -3.0792 | opp_overlap 731333 731329 731328 731340, overlap 731335 731340 TAATATTTGACTCAA CACTAAAGCAGTCTC GTGT GAGACTGCTTTAGTG TTGATAGTTATCCAA TERM 591 731364 - 731335 - R 89 -18.1 -3.09505 | opp_overlap 731333 731329 731328 731340, overlap 731333 731340 ATATTTGACTCAACA CTAAAGCAGTCTC GTGT GAGACTGCTTTAG TGTTGATAGTTATCC TERM 592 731340 - 731359 + r 86 -12.2 -3.95424 | opp_overlap 731335 731333 731340, overlap 731333 731329 731328 TGACTCAACACTAAA GCAGTCTC GTGT GAGACTGC TTTAGTGTTGATAGT TERM 593 731359 - 731340 - R 86 -12.2 -3.93782 | opp_overlap 731340 731333 731329 731328, overlap 731335 731333 TGACTCAACACTAAA GCAGTCTC GTGT GAGACTGC TTTAGTGTTGATAGT TERM 594 731953 - 731938 - R 70 -3.2 -4.65078 | AGACGGTTAACAAAA CGGAAT GGAA AGTCCG GCCATAGTAGGTGAT TERM 595 732137 - 732126 - R 71 -7.2 -4.2354 | GAAAGGCGAAAAGAA CCCC GGGA GGGG AGTGAAATAGATCCT TERM 596 734800 - 734778 - R 100 -15.6 -4.19678 | opp_overlap 734778 TTACAGCCCAAGAAA CCCCGTAGCC CAA AGCTACGGGG TTTTTTGCATTGGGA TERM 597 734778 - 734800 + r 100 -14.9 -5.15969 | opp_overlap 734778 TTACAGCCCAAGAAA CCCCGTAGC CCAAA GCTACGGGG TTTTTTGCATTGGGA TERM 598 734888 - 734869 - R 100 -13.6 -5.79526 | opp_overlap 734869 ACATCCCAAAAAAAA GAGAGCGC TGAC GCGCTCTC TTTTTTCATCCTGAA TERM 599 734869 - 734888 + r 100 -13.6 -5.1861 | opp_overlap 734869 ACATCCCAAAAAAAA GAGAGCGC TGAC GCGCTCTC TTTTTTCATCCTGAA Daci_0661 735682 - 734915 - | glutamine amidotransferase class-II TERM 600 735983 - 735948 - g 72 -6.7 -4.36914 | gap 1, overlap 735950 CGCTTCGGCAGAAAA CGGCAGGG-CAGCTCG ATGCG CTGGCAGACCCTGCCG ATATCGATGCCGTGC TERM 601 736233 - 736244 + G 72 -3.6 -4.57073 | TGCAATGTGTTGAAG GGGC GTGG GCTC TTTTTCGCAGGGGTG Daci_0662 735923 - 736450 + | hypothetical protein TERM 602 736487 - 736472 - T 80 -10.4 -4.00042 | opp_overlap 736472, overlap 736476 GTTTTCATGAAACAA GGCAGC CAAA GCTGCC TTTTGCATGCATTGA TERM 603 736472 - 736487 + T 84 -10.4 -4.21275 | opp_overlap 736472 736476 GTTTTCATGAAACAA GGCAGC CAAA GCTGCC TTTTGCATGCATTGA Daci_0663 736702 - 736514 - | 4-oxalocrotonate tautomerase Daci_0664 736974 - 736720 - | hypothetical protein TERM 604 737027 - 737005 - R 100 -9.9 -5.14965 | gap 1, opp_overlap 737005 AGGCCCATGAAAAAA GCACCTCAGG CAAG CCTG-GGTGC TTTTGCAGCCTTGGG TERM 605 737005 - 737027 + r 80 -9.9 -4.11484 | gap 1, opp_overlap 737005 AGGCCCATGAAAAAA GCACCTCAGG CAAG CCTG-GGTGC TTTTGCAGCCTTGGG Daci_0665 739247 - 737055 - | malate synthase G Daci_0666 739513 - 740487 + | LysR family transcriptional regulator Daci_0667 740516 - 741121 + | hypothetical protein Daci_0668 741229 - 741675 + | putative transmembrane protein TERM 606 741664 - 741681 + F 71 -6.2 -4.34402 | GCGGTGTTCTGGGCG CGGGGC ATGTAG GCTCCG TTTTCCTGTCCGGCG Daci_0669 741730 - 743427 + | arginyl-tRNA synthetase TERM 607 743903 - 743891 - g 75 -4.7 -4.54477 | GGAAAAGGCAGAAAA GGCCG ACG CCGCC TTCAACTACTTCGTG Daci_0670 743448 - 744137 + | sporulation domain-containing protein Daci_0671 744219 - 744869 + | DSBA oxidoreductase TERM 608 744882 - 744940 + F 75 -2.2 -4.95896 | gap 1, opp_overlap 744893, overlap 744896 TGAGGCCCGGGCCTC GGCCCAGCCAAGCCGCGACAGGCCCGC CATTGC GCGGGCCTGTCGCT-TTTGGAAACCTC TTTTTGTGCCTTTGT TERM 609 744930 - 744893 - f 72 -12.6 -3.05384 | opp_overlap 744882 744896 CCTCGGCCCAGCCAA GCCGCGACAGGCCCGC CATTGC GCGGGCCTGTCGCTTT TGGAAACCTCTTTTT TERM 610 744896 - 744927 + F 100 -23.1 -4.09511 | opp_overlap 744893, overlap 744882 CGGCCCAGCCAAGCC GCGACAGGCCCGC CATTGC GCGGGCCTGTCGC TTTTGGAAACCTCTT TERM 611 745071 - 745087 + G 71 -11.5 -3.56643 | TCCTCCCTCCTGCTC GCCGCCG CCC TGGCGGC TTTCGCCGGTATGGC TERM 612 745572 - 745529 - g 75 -9.4 -4.11216 | gap 1 CGTTGACGGGCAAAA GACCAGCGGTGGCCAGCCCAG CTC CACGGCCGGCCAGGGC-GGTC GCGTGCGCGCCGTGC Daci_0672 745017 - 745703 + | lipopolysaccharide transport periplasmic protein LptA Daci_0673 745700 - 746488 + | ABC transporter related Daci_0674 746543 - 748159 + | RNA polymerase, sigma 54 subunit, RpoN Daci_0675 749805 - 748198 - | regulator of RNA terminal phosphate cyclase TERM 613 748984 - 748956 - G 70 -14.5 -2.77523 | opp_overlap 748961 748962, overlap 748953 748951 CGTCCAGGAACAGCA CGCCCTGGTGCGC GCT GCGCAGCAGGCCG GCGCGGTCGGCCGCA TERM 614 750038 - 750007 - H 79 -12.8 -3.53012 | opp_overlap 750013 750036 CGGGGTTGGGGCAAA GGCCCGCCCCGCCG GTGC CGGAGGTCCGGGCC CCCAGGGGCTTGTCG TERM 615 750282 - 750255 - H 77 -11.2 -3.5936 | overlap 750247 750246 TTGAAACGGTCGAAA GACCACCCGCCG AACG CGGGAGGTGGCC ACCGGGTTGCGATGC Daci_0676 750503 - 751642 + | band 7 protein TERM 616 752191 - 752208 + G 79 -5.5 -4.79223 | opp_overlap 752180, overlap 752180 752192 ACCAGCGTCTTCCAG GGCGAAG AGGC CTTCTCC TTTTTGCTCATGTGG TERM 617 752482 - 752439 - g 76 -7.2 -4.37886 | gap 1, opp_overlap 752467 GCATTGGGCAGAAAA GCTG-CTGCAACTGGCCGAGC GTG GCCCGGCCAGCACCTGGCTGC CTTCAGGTAAGCGCG Daci_0677 751714 - 752559 + | hypothetical protein TERM 618 752861 - 752810 - g 80 -15.8 -3.21416 | gap 1, overlap 752857 GATCCCGACCATCAA GGCCATCATCCCGGCGGCCGTGGGC GTG GACATCGGCTGC-GGAATGATGGCC GCCAAGACCACGCTG Daci_0678 752592 - 753830 + | hypothetical protein TERM 619 754626 - 754680 + G 71 -9.9 -3.72576 | gap 2, opp_overlap 754632 ACGAGCTGCTGGAGC TCA-AGATGCGC-CTGGGCGAGGCCGC CAA GGGGCCGCGCCGGGTGCGCGTCCATGA TTTCCTGGAGCGCGA Daci_0679 753989 - 754804 + | nucleotidyltransferase-like protein Daci_0680 754814 - 755857 + | RNA 3'-phosphate cyclase Daci_0681 756829 - 755864 - | arginase Daci_0682 757920 - 756847 - | ornithine cyclodeaminase TERM 620 758606 - 758577 - g 81 -12.1 -3.90112 | CGCCGCTCAAGGAAA CCCTGGCCGCG GCCATGAT CGCGGCCACGG GCTGGGACCCGCATG Daci_0683 758036 - 759316 + | putative RNA methylase TERM 621 759607 - 759627 + G 71 -11.1 -3.64703 | GCCGTCGAGTACGTG GCCGATGCG CCG CGCATCCGC TTTGCCTGCACCGAC Daci_0684 759313 - 759801 + | PilT domain-containing protein Daci_0685 759992 - 760309 + | small multidrug resistance protein Daci_0686 760873 - 760322 - | GCN5-related N-acetyltransferase TERM 622 761209 - 761236 + r 100 -9 -4.84918 | CCCACCGATGCGATC GCCCCATTGCCG ATGA TGGCCTTGGGGC TTTTGTGTTTCTGGG Daci_0687 763658 - 761274 - | ferredoxin TERM 623 761880 - 761912 + g 80 -16.9 -3.14132 | GGGCGTGATGCCGAT GCCGCCGGCCACCAG GAT CAGGTGGCTGGCGCC TTCGTCCAGCGGGAA Daci_0688 764666 - 763686 - | hypothetical protein Daci_0689 764827 - 765651 + | IclR family transcriptional regulator Daci_0690 766709 - 765693 - | hypothetical protein TERM 624 766745 - 766777 + G 83 -12.6 -4.07568 | GGCAAGCTGGTGGCC GCCCTGGTGCGCGG CATCT CCGTGCTCCAGTGC TTTTCCAACAAGCAC Daci_0691 766712 - 767494 + | IclR family transcriptional regulator Daci_0692 768620 - 767496 - | L-carnitine dehydratase/bile acid-inducible protein F Daci_0693 769604 - 768642 - | hypothetical protein Daci_0694 770424 - 769645 - | short-chain dehydrogenase/reductase SDR Daci_0695 771625 - 770447 - | acetyl-CoA acetyltransferase TERM 625 770818 - 770840 + g 75 -9 -4.21194 | opp_overlap 770804, overlap 770813 AGCGCGCACGCGGGC GCAGGCCCAG TTG CTGGGCGCGC TTTTCGCTCATCAGC Daci_0696 771789 - 773354 + | AMP-dependent synthetase and ligase TERM 626 774164 - 774179 + G 75 -4.6 -4.56597 | overlap 774165 GGCCGTGCGCGCGGC CGCCTC CATC GAGGCC TTTTTGCACAAGACC TERM 627 774300 - 774253 - g 72 -13.2 -3.22475 | opp_overlap 774253 774251, overlap 774251 TCGACTTCCAGAACA CGCGCTTCAAGCTGGCCGAGGC CAAG GCCCAGGCCACCATGCTGCGCG TCTTCGTGGACGACT Daci_0697 773403 - 774545 + | acyl-CoA dehydrogenase domain-containing protein TERM 628 775001 - 774970 - g 72 -3.6 -4.58395 | CCTATTGGGCAAAAA CGCCACCATAGA AATAGAAA CCCAGGGCGGCG GCAGGCGCTTCATCG Daci_0698 774815 - 777193 + | type VI secretion system Vgr family protein Daci_0699 777209 - 777550 + | PAAR repeat-containing protein Daci_0700 777557 - 778165 + | hypothetical protein Daci_0701 778162 - 778566 + | hypothetical protein Daci_0702 778563 - 779318 + | hypothetical protein Daci_0703 779351 - 780445 + | hypothetical protein TERM 629 781540 - 781559 + G 74 -10.7 -3.80858 | opp_overlap 781523 781521 781524, overlap 781535 CGTGGCAATTGGCAT GCGACGC CTATAT GCGTCGC TTTGATGAATTCTGA Daci_0704 780465 - 781574 + | hypothetical protein Daci_0705 781575 - 782108 + | hypothetical protein Daci_0706 782147 - 783091 + | yecA family protein Daci_0707 783125 - 783439 + | XRE family transcriptional regulator Daci_0708 783911 - 783420 - | CinA domain-containing protein Daci_0709 784422 - 783922 - | phosphatidylglycerophosphatase A Daci_0710 786205 - 784553 - | hypothetical protein Daci_0711 787209 - 786244 - | thiamine-monophosphate kinase TERM 630 787082 - 787064 - G 75 -8.8 -4.15222 | overlap 787065 ACGTCGGCGAAGAAA TGCCGGCC CTC GACCAGCA TGTCGCTGGAGACGG Daci_0712 788174 - 787275 - | LysR family transcriptional regulator TERM 631 787878 - 787835 - G 78 -16.6 -3.08679 | gap 1, overlap 787873 GGCGCGCATGGAACA GC-GCCAGCACGGGCGGCAGC CAG GCTGCCGCCAGCGAAGGCAGC AGGGCGATGGACACG Daci_0713 788245 - 789693 + | hypothetical protein Daci_0714 789690 - 790061 + | hypothetical protein Daci_0715 790110 - 791093 + | hypothetical protein Daci_0716 791202 - 793322 + | hypothetical protein Daci_0717 794131 - 793385 - | hypothetical protein TERM 632 793459 - 793449 - G 89 -2.4 -5.27335 | TTCGTGAAATAAAAA CCTG CTG CGGG CTTGGCCGGATCATG Daci_0718 795615 - 794485 - | carboxylate-amine ligase Daci_0719 796861 - 795599 - | sodium/hydrogen exchanger TERM 633 795828 - 795799 - G 78 -8.5 -4.26903 | gap 1, overlap 795814 GCGAGGCGATCAAAA GCGCCACCGACGAC ATG GGCGCCA-TGGCGC AGCCCACCCAGAAGG TERM 634 796927 - 796902 - R 85 -16.1 -3.17075 | opp_overlap 796888, overlap 796868 TGGCCCGCAAGCGAA GCTCCGCAGGG CCTT CCCTGCGGCGC GGGCAAGCCCGCGTC Daci_0720 799027 - 797060 - | putative site-specific recombinase transmembrane protein TERM 635 797357 - 797342 - G 78 -6 -4.59773 | overlap 797344 CCCCAGGCCGAAAAA GGCCGC GAAC GCGGGC ACCAGGCCCAGCATC TERM 636 798149 - 798095 - G 72 -15.1 -2.94099 | opp_overlap 798058 GGCCGCCAGCAGAGA GGTGTTGGTGGACAGC-AGCGCGCGCA GGC TGCGC-CGCTCGATGCCCACGGACACC AGGTTGGCCAGCAGG Daci_0721 799550 - 799080 - | ApaG TERM 637 800196 - 800169 - g 73 -9.8 -3.95584 | opp_overlap 800184 800195 GCGGCATCAAGGAAA CCAACATCCGCC GCGT GGCCGATGCCGG TGCCGACACCTTCGT Daci_0722 799604 - 800287 + | ribulose-phosphate 3-epimerase TERM 638 800313 - 800333 + T 100 -16.1 -4.4078 | opp_overlap 800313 GCCTCCAGCAAAAAA GGGCCCGCG AAT TGCGGGCCC TTTTCGTTGCCAACG TERM 639 800333 - 800313 - T 100 -15.4 -5.14563 | opp_overlap 800313 GCCTCCAGCAAAAAA GGGCCCGC GAATT GCGGGCCC TTTTCGTTGCCAACG Daci_0723 800681 - 800355 - | hypothetical protein TERM 640 800442 - 800416 - G 76 -13.6 -3.53012 | CCCTGCGTGTCGAAA CCGGGCGGCGCA AAG CGCGCCACCGGG ACATGGTTGTGCTGG TERM 641 800760 - 800729 - R 100 -19.6 -3.76224 | opp_overlap 800707 800704 800755, overlap 800702 800712 GGCGGATTCATGAAA TCCGCCATGAACTG TATT CAGTCCATGGCGGA GACTGTAGAGTCATC Daci_0724 801887 - 800841 - | porin Daci_0725 802253 - 803788 + | Sel1 domain-containing protein Daci_0726 803822 - 804514 + | two component transcriptional regulator Daci_0727 805574 - 804567 - | transketolase central region Daci_0728 806431 - 805571 - | transketolase domain-containing protein Daci_0729 807724 - 806465 - | TRAP dicarboxylate transporter, DctM subunit Daci_0730 808292 - 807738 - | tripartite ATP-independent periplasmic transporter DctQ Daci_0731 809296 - 808310 - | TRAP dicarboxylate transporter, DctP subunit Daci_0732 810108 - 809359 - | short-chain dehydrogenase/reductase SDR Daci_0733 810213 - 811184 + | LysR family transcriptional regulator TERM 642 811692 - 811719 + G 73 -12.1 -3.53224 | gap 1, overlap 811699 TGAGCCTGGCCGTGC TGGCT-GCCAGC AGCAC GCTGGCCAGCCA TTTCGGCGAACGGTC TERM 643 811791 - 811813 + G 74 -12.7 -3.55444 | gap 1 TGATCGGCGGCCTGG GGCCG-GGCC TGCT GGCCACGGCC TTTGCGGCCTACAGC Daci_0734 811382 - 814027 + | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) TERM 644 814049 - 814072 + T 70 -12.4 -2.89683 | CGTCCCGGCGCCGGT GCCGGTGCCA GTGC TGGTGCCGGC TATGTCAACTCGGCT Daci_0735 816597 - 814072 - | PAS/PAC sensor signal transduction histidine kinase TERM 645 816016 - 816037 + g 72 -4.4 -4.56597 | gap 1, overlap 816016 816018 GATCAGTCCCACCAG C-ACGGCGG GTGCG CCGCTGTCG TTTTTGAAGGCCAGG Daci_0736 817467 - 816628 - | extracellular solute-binding protein Daci_0737 818241 - 817477 - | metal dependent phosphohydrolase Daci_0738 818612 - 818241 - | response regulator receiver protein Daci_0739 820116 - 818881 - | metal dependent phosphohydrolase Daci_0740 821888 - 820191 - | methyl-accepting chemotaxis sensory transducer Daci_0741 822221 - 822703 + | CheW protein Daci_0742 822775 - 824520 + | methyl-accepting chemotaxis sensory transducer Daci_0743 824673 - 825350 + | phosphoglycolate phosphatase Daci_0744 825503 - 826798 + | spermidine synthase TERM 646 826952 - 826927 - f 72 -2.5 -4.8622 | opp_overlap 826928, overlap 826928 TGCTGTAATGAAAAA CGGCGGG AAGGCCTGTGCG CCCGCCA TTTTTTCGGCCTCCC Daci_0745 827142 - 827735 + | hypothetical protein Daci_0746 828300 - 829070 + | two component transcriptional regulator TERM 647 830151 - 830199 + GT 95 -12.9 -4.21194 | opp_overlap 830142 830156 CGAGAACGCCGTGCA GCACAGCCCGCAGGGCGCCACCG TCA CCGTGAAGGCCTGCGGCCTGGGC TTTTCGGTGCTGGAC Daci_0747 829039 - 830454 + | histidine kinase Daci_0748 831025 - 830429 - | putative lipoprotein transmembrane TERM 648 831174 - 831189 + r 76 -6 -4.64861 | overlap 831175 CTGAGTCTCTTTGCA AGCCCC TGTC GGGGCG TTTCTTTTCGAGGCC Daci_0749 832369 - 831389 - | patatin Daci_0750 832818 - 832369 - | hypothetical protein Daci_0751 833210 - 832815 - | hypothetical protein TERM 649 833911 - 833932 + G 81 -7.9 -4.56775 | gap 1, opp_overlap 833897 AGCGCTTCAAGGTGG CGCTGC-GCC CGG GGCTGCCGCG TTTTTGCGGCGGGCT TERM 650 835040 - 835016 - g 82 -13.6 -3.70848 | gap 1 AGAGACCGAACACAA GGCC-CGCGCA CTGA TGCGCGCGGCC GAGCTGGTGGAGGAA Daci_0752 833568 - 835067 + | anthranilate synthase component I Daci_0753 835064 - 835414 + | chorismate mutase Daci_0754 836643 - 835411 - | acetate kinase TERM 651 836352 - 836311 - G 70 -15.7 -2.71144 | CACGGGCTCGAAGTA GCGGCTGCCGCCGTGCACC ACGC GGTGGGCGACGGCGGCCAC GCGGGCGCCGTCCAG Daci_0755 838118 - 836640 - | bifunctional enoyl-CoA hydratase/phosphate acetyltransferase TERM 652 837822 - 837771 - G 70 -8.5 -3.86015 | gap 1 CAGCGGCGCCAGAAA GCGCA-GCGTCTGGCCGACCAGGG TGGTG CCGGGGCCGGGCAGGCGCGTGCCC AGCACCGAAGCCAGC Daci_0756 840574 - 838115 - | hypothetical protein TERM 653 838695 - 838746 + g 71 -10.1 -3.72576 | opp_overlap 838705, overlap 838696 CCGCGTGCGCGCAGC ACGTGGAACAGGGCGCGGATG-ACG GCCT CGTACAACC-CGCCCTGGGCCACGC TTTCGTGCAGCCGCG TERM 654 840658 - 840697 + r 76 -12.7 -3.33815 | GCGGATGGCCGCCCC GCGCCCATGCGGCCCCG AACCTG CGGGACCGCGTGGCGGC TTCCTTGGGGGCCGT Daci_0757 841221 - 840712 - | hypothetical protein Daci_0758 842405 - 841275 - | ABC-2 type transporter Daci_0759 845163 - 842407 - | ABC transporter related TERM 655 844377 - 844390 + g 84 -5.2 -5.0916 | GGGCAATGGTCACGG GCGC ATGGCC GCGC TTTTTCTCTTCGGGC Daci_0760 846251 - 845160 - | secretion protein HlyD family protein Daci_0761 847744 - 846269 - | RND efflux system outer membrane lipoprotein TERM 656 847217 - 847274 + g 78 -17.8 -2.72344 | gap 3 CACCTGGGCGATCAG CGCGG-TCTGCACGGCGTGGC-GGCCCGC ATC GCTGGCCAGCCAGGTC-TGCAGGGCCGCG TCCTTGAGGCTGCGC Daci_0762 848545 - 847778 - | enoyl-(acyl carrier protein) reductase TERM 657 847894 - 847856 - G 85 -18 -3.16564 | GTCCGAGGCCAGGAA GGCGCACAGCGGCCCCAC GTC GTCGGGCCGCAGCTCGCC GGCAATGGGCGAGCG TERM 658 850310 - 850254 - g 74 -12.2 -3.64703 | overlap 850236 850255 GCGCCGTGACCGAAA TCG-GCCGCGCCGAGTACCAGGTGGGCC AGA GGACCACCCGGCAGTCC-CGCGGCACGG AGGGCGAGTCGATCG TERM 659 850309 - 850255 - g 70 -15.7 -2.78679 | overlap 850236 850254 CGCCGTGACCGAAAT CG-GCCGCGCCGAGTACCAGGTGGGCC AGA GGACCACCCGGCAGTCC-CGCGGCACG GAGGGCGAGTCGATC TERM 660 850381 - 850366 - g 71 -2.4 -4.62069 | opp_overlap 850375, overlap 850367 850368 CGCCGAGTCCAAAAA GGCGCG CAAC CGCAGC ATGCTGGATTTGCAG Daci_0763 849107 - 850603 + | hypothetical protein TERM 661 850661 - 850681 + F 75 -13.9 -2.88677 | overlap 850661 850663 TCGCGTTGAGGTAGT CGCGGCGCG GGC CGGGCCGCG TGTCGTCGTTGTGTC TERM 662 851453 - 851482 + G 75 -4.9 -4.56597 | gap 1, overlap 851455 AGCCCGGCCGACCTG GAGCGCGTGCTGCC GCA GGTGGCGC-CGCTG TTTTTGCGCCAGGGC Daci_0764 850799 - 851911 + | hypothetical protein Daci_0765 851934 - 853178 + | toxic anion resistance family protein TERM 663 853475 - 853523 + G 79 -8 -4.46212 | gap 1, opp_overlap 853501 CTGCCGCCCAATGGC GCCTATCCCGCGCTGGC-GCTGG CAAA CAAGCCGCTGGCGCGCGAAAAGC TTTTCTACTCGCGCG TERM 664 854617 - 854650 + G 85 -15.9 -3.64184 | GCGCGAGCAGCGCAT GGCGCGCGACGGCGG CGCG CCGCTGGTGCGCGTC TTTCCCATCATCTTT Daci_0766 853181 - 854791 + | von Willebrand factor type A Daci_0767 854820 - 855443 + | hypothetical protein TERM 665 855803 - 855813 + F 72 -2.4 -4.81249 | TCGCTGCGGCATGCC CGCG CCA CCCG TTTTTCCCTTTGAGA Daci_0768 855842 - 856429 + | glutamine amidotransferase of anthranilate synthase Daci_0769 856458 - 857492 + | anthranilate phosphoribosyltransferase TERM 666 857629 - 857605 - g 74 -13.6 -3.28712 | GGCCGCCGCCCAGAA GCGCATGCCC TTCGC GGACATGCGC CGCGACGCCGAAAGC Daci_0770 857543 - 858346 + | indole-3-glycerol-phosphate synthase TERM 667 858414 - 858390 - f 73 -13.6 -2.75064 | gap 1, opp_overlap 858390, overlap 858387 TGCGCCACCGAAGCA GCCCGC-CGCA GCCA TGCGTGCGGGC TTTTTTTTGTGCAAA TERM 668 858390 - 858414 + F 100 -13.6 -5.93809 | gap 1, opp_overlap 858390 858387 TGCGCCACCGAAGCA GCCCGC-CGCA GCCA TGCGTGCGGGC TTTTTTTTGTGCAAA TERM 669 858497 - 858485 - f 71 -9.1 -3.75015 | overlap 858475 ACAATGCGCATGAAA TGCCG CTC CGGCA ACATGGCCGCAGCCC Daci_0771 858532 - 859278 + | putative outer membrane protein B TERM 670 859320 - 859345 + G 74 -13.3 -3.35046 | overlap 859319 CGTAAAAGGCGTTGC CCGCAAGTCCT GTCT GGGGCTTGCGG TGTTTGCGGCCCTGG Daci_0772 859297 - 860790 + | fibronectin type III domain-containing protein TERM 671 860850 - 860884 + F 79 -8.5 -4.5123 | opp_overlap 860856, overlap 860852 CGGGTATCCTCAGGA CATCAATGCACCGGC CGCGC GCCGGTGCATTCCCG TTTCTTTCGTACCTT TERM 672 860878 - 860856 - g 79 -14.9 -3.29471 | opp_overlap 860852 860850 TCCTCAGGACATCAA TGCACCGGC CGCGC GCCGGTGCA TTCCCGTTTCTTTCG Daci_0773 860855 - 861679 + | uracil-DNA glycosylase Daci_0774 863706 - 861673 - | beta-lactamase domain-containing protein TERM 673 863832 - 863870 + G 95 -18.3 -3.64682 | gap 2, overlap 863824 TCCTACCTGCCCACG CTGCG-CGCCGGT-CGCTG GTT CAGCGCACTGGCGCCGCAG TTTGCCGATTTGCTG Daci_0775 863796 - 864509 + | Crp/FNR family transcriptional regulator Daci_0776 865242 - 864694 - | protein of unknown function ATP binding Daci_0777 865894 - 865235 - | hypothetical protein TERM 674 866183 - 866195 + r 84 -3.3 -5.18357 | overlap 866160 866184 GCAGCGAGGCTTCAG ACGCT TTG AGCGG TTTTTTGGTCGCTTC Daci_0778 867268 - 866348 - | LysR family transcriptional regulator TERM 675 867198 - 867234 + g 78 -17.3 -2.78384 | opp_overlap 867224 GCTTCGGTCAGCGAT CCGCATTGCGCCACTTC GTG GAAGTAGCGCAGCGCGG TGTCCTGCAAAAGAA TERM 676 868348 - 868318 - g 70 -14.6 -2.71144 | opp_overlap 868311 CAGCCTGGCCAAGCA GGGCGTGGAGGCCG CAT CGCCCCGCACGCCC GCGCAGTTCGCTGCC Daci_0779 867422 - 868429 + | hypothetical protein Daci_0780 868492 - 870198 + | gamma-glutamyltransferase Daci_0781 870862 - 870221 - | hypothetical protein Daci_0782 871728 - 870859 - | xylose isomerase domain-containing protein Daci_0783 872762 - 871725 - | monosaccharide-transporting ATPase Daci_0784 873793 - 872759 - | monosaccharide-transporting ATPase Daci_0785 875285 - 873786 - | ABC transporter related TERM 677 875100 - 875157 + g 77 -14.7 -3.15544 | gap 1 GTCGATGCACGCACC CGGCTGCGGCGCGTGCACGCCGCT-GAG CAC CTTGATCGCCGTGCTCTTGCCGCTGCCG TTGCTGCCCATCAGG Daci_0786 876288 - 875299 - | putative ABC transporter periplasmic sugar-binding protein TERM 678 877198 - 877230 + G 76 -7.6 -4.2558 | gap 1, overlap 877198 ATGGCAGCGCTCTAC CAGC-GCCTGGGCGG CCTG CCGCGCGCGCTGCTG TTTTCATCGGGCATC Daci_0787 876355 - 877482 + | LacI family transcription regulator Daci_0788 878708 - 877704 - | LysR family transcriptional regulator Daci_0789 878712 - 880007 + | FMN-dependent alpha-hydroxy acid dehydrogenase TERM 679 880314 - 880274 - g 71 -10.1 -3.78934 | GGTGGTGGACAACAA GGGCGGCGGCGGAGGCGCC ATC GGCGCGCACGAGGCCGCGC GCGCCCAGCCCGACG Daci_0790 880059 - 881045 + | hypothetical protein Daci_0791 881183 - 881686 + | alkylhydroperoxidase Daci_0792 882682 - 881702 - | hypothetical protein TERM 680 882729 - 882761 + r 93 -11.2 -4.30441 | gap 1, overlap 882730 GGCGGATGCGGCTAG TCGGC-GCCCAGCCC GATG GGGCTGGGCTGGCGC TTTTCGGTGTTGTGG TERM 681 882730 - 882760 + r 82 -14.7 -3.17542 | gap 1, overlap 882729 GCGGATGCGGCTAGT CGGC-GCCCAGCCC GATG GGGCTGGGCTGGCG CTTTTCGGTGTTGTG Daci_0793 883936 - 882725 - | CitB domain-containing protein Daci_0794 885357 - 883933 - | tricarballylate dehydrogenase TERM 682 885441 - 885407 - R 72 -11.3 -3.3785 | gap 1, opp_overlap 885401 CGAATGTAGGGAGAA CGCCGCGC-GGCGGGC AGGG GCCCGCCGGCATGGGG GTATCAGTCTTCGTG Daci_0795 886407 - 885445 - | LysR family transcriptional regulator Daci_0796 887270 - 886464 - | IclR family transcriptional regulator TERM 683 887083 - 887055 - G 72 -15.4 -2.87132 | gap 1, overlap 887081 CCTGTGCGCCACATA GCC-GCTGTCCAC CAGG GTGGACAGCAGGC GGTACACCGTGGCGC TERM 684 887344 - 887310 - g 79 -7.1 -4.40358 | gap 2, overlap 887311 AGGCAGGGCAGAAAA GGGCCTGCGTGCAGCGC GCA GTG-TGC-CGCAGGCCG TCGAAAGCCCACACA Daci_0797 887291 - 888451 + | hypothetical protein Daci_0798 888508 - 890007 + | AMP-dependent synthetase and ligase TERM 685 890327 - 890296 - g 70 -12.2 -3.28924 | gap 1, opp_overlap 890303, overlap 890283 GAGCGCGCCGGAGAA CCTGCAGGGCG-CCG TCT CGGCCGGCCTGCTGG CCGTGGGCAGCTCCT Daci_0799 890039 - 890824 + | citrate synthase Daci_0800 890864 - 892039 + | L-carnitine dehydratase/bile acid-inducible protein F TERM 686 892683 - 892673 - g 70 -8.2 -3.86015 | overlap 892674 CATGTGCCCTACAAA GGCC TGG GGCC GGCGCTCAATGACCT Daci_0801 892076 - 893089 + | hypothetical protein TERM 687 893736 - 893724 - g 72 -6.2 -4.25104 | GCTGCGCCAGCAAAA GCGC CTGCT GCGC CGCTGGGAGGGCATG Daci_0802 893101 - 893889 + | enoyl-CoA hydratase Daci_0803 894818 - 893892 - | LysR family transcriptional regulator TERM 688 895703 - 895678 - g 90 -12.5 -4.4078 | gap 1, opp_overlap 895668 CGGCGTCAAGGAAAA GGGCG-CGCCGC GCG GCGGCGGCGACC ATGATCCCTGGTTCG Daci_0804 894920 - 896038 + | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TERM 689 896104 - 896122 + F 100 -13.1 -5.67529 | TTGCTATCGTCACGG GGGGCGG CACAA CCGCCCC TTTTTCTTTTTCCTT Daci_0805 896170 - 897729 + | beta-lactamase Daci_0806 900463 - 897698 - | histidine kinase TERM 690 897965 - 897917 - G 71 -11 -3.59979 | overlap 897954 GGCGGCCACGTCAAA GCCTGCGCCGTCGTCGG-TGATGC GCA GCATCAGCCAATG-CGGCTCGGGC CACTGCAGCTGCACC TERM 691 899752 - 899713 - G 93 -21.4 -3.16564 | opp_overlap 899714 CCGTCAGCCCAGCAA TCCGCGCACGCGTGCCGT GTTG ACGGCGCGCGTGCGCGAG GACACGGCCAGCTTG TERM 692 900435 - 900417 - G 72 -3.7 -4.56597 | overlap 900418 CGGCGGGCGTAAAAA GGGGCAG GATGG CCGCCCG ACTGTGGGCGAAGCC Daci_0807 900576 - 901211 + | TetR family transcriptional regulator Daci_0808 902885 - 901227 - | phenylacetic acid degradation protein paaN TERM 693 903120 - 903083 - g 71 -11.3 -3.65902 | gap 1 TCGACCCCATCGAAA CCGCCAGCCGCGACGAGA TCG CCTCGTTGCAGCTG-CAG CGCCTGCGCTGGTCG Daci_0809 903034 - 904353 + | phenylacetate-CoA ligase Daci_0810 904399 - 905421 + | phenylacetate-CoA oxygenase subunit PaaA Daci_0811 905418 - 905723 + | phenylacetate-CoA oxygenase subunit PaaB Daci_0812 905737 - 906519 + | phenylacetate-CoA oxygenase, PaaI subunit Daci_0813 906519 - 907088 + | phenylacetate-CoA oxygenase, PaaJ subunit Daci_0814 907085 - 908182 + | phenylacetate-CoA oxygenase/reductase, PaaK subunit Daci_0815 909667 - 908213 - | sulphate transporter TERM 694 909721 - 909673 - R 76 -10.7 -3.70902 | opp_overlap 909672 909676 GTTTCGACATGGAAA TGGCCGGCCCCGCCGCGCTGGGT GTG ACAGGGCGGGGCAGGGCGGGGCA GGATTTTGTAGACGG TERM 695 909777 - 909747 - R 76 -14.6 -2.54574 | opp_overlap 909745 909744, overlap 909746 909744 GACGGCAATGAACAT GCCGGGCGTCGGGC CAT GCCCGAAACCTGGC GGCTTGTACGGTTCG Daci_0816 910498 - 910001 - | hypothetical protein TERM 696 910553 - 910532 - R 100 -14.5 -5.26119 | opp_overlap 910551 CCTGGAAAAACAAAA CCCGCTTTC CGGG GAAAGCGGG TCTGGATGCTCAAGA Daci_0817 911151 - 910585 - | single-strand binding protein Daci_0818 912601 - 911312 - | major facilitator transporter TERM 697 912468 - 912443 - G 74 -12.7 -3.60296 | gap 1, opp_overlap 912460, overlap 912446 CATGCGCAGCGCAAA GAT-CAGCGCCA GGC TGGCGCTGGATC GGCGTTCCTGCGAGG TERM 698 912802 - 912780 - g 78 -16.2 -3.03441 | CACGATTTCCGAAGA CGGCGGCCTG GAC CGGGCCGCCG ACTCCCGCTCCCAGC TERM 699 914093 - 914124 + G 72 -13.6 -3.16742 | gap 1 CCGTCTGCCCCGACT GCGGCGGCACGCGGC TGC GCCGCGAGGCGC-GC TTCGTGCGCATTGGC Daci_0819 912751 - 915864 + | excinuclease ABC, A subunit TERM 700 916847 - 916865 + G 83 -4.5 -4.87665 | gap 1, overlap 916844 GGGCTGGGATGCCTC GCCTGCGC CGCT GC-CGGGC TTTTTCTGGGTGGCC Daci_0820 915873 - 917027 + | FAD dependent oxidoreductase Daci_0821 918026 - 917049 - | succinylglutamate desuccinylase/aspartoacylase Daci_0822 919304 - 918177 - | hypothetical protein Daci_0823 920221 - 919316 - | LysR family transcriptional regulator Daci_0824 921069 - 920242 - | orotidine 5'-phosphate decarboxylase Daci_0825 921188 - 922039 + | hypothetical protein TERM 701 922110 - 922069 - T 100 -16.6 -3.79113 | overlap 922071 922072 AGGTCGGGAGAAGAA GACGCAGCCTGACTGCGC ACACGG GCGCAGTCAGGCTGCAGG GCCTCAGCGTTGCGC TERM 702 922108 - 922071 - T 100 -23.6 -3.4811 | overlap 922069 922072 GTCGGGAGAAGAAGA CGCAGCCTGACTGCGC ACACGG GCGCAGTCAGGCTGCA GGGCCTCAGCGTTGC TERM 703 922107 - 922072 - T 100 -24.9 -2.68545 | overlap 922071 922069 TCGGGAGAAGAAGAC GCAGCCTGACTGCGC ACACGG GCGCAGTCAGGCTGC AGGGCCTCAGCGTTG Daci_0826 922713 - 922114 - | hypothetical protein Daci_0827 923249 - 922710 - | hypothetical protein TERM 704 923037 - 923064 + g 75 -9.1 -4.21827 | AGGCAGGGCCACGTG GACCGGCGTGG TGCGCT CGATGCCGGTC TTTTGCAGTGTTTCC Daci_0828 924686 - 923370 - | phosphoglycerate kinase Daci_0829 925092 - 924757 - | branched-chain amino acid transport Daci_0830 925955 - 925092 - | AzlC family protein Daci_0831 926935 - 925952 - | methionyl-tRNA formyltransferase TERM 705 926404 - 926430 + g 73 -16.6 -2.66316 | overlap 926390 926398 GGCGCCCGCCCAGGT CGGCCAGCTTGT CGT GCAGGCTGGCCG TGGTGTCGTCGGCGG Daci_0832 927510 - 926971 - | putative lipoprotein transmembrane TERM 706 927448 - 927424 - G 72 -4.8 -4.47217 | overlap 927425 AAGCAGCAAGGAAAA GGCCAGGGCA AGCAG CGCCCAGGCA ACGAGGCCCGCGCCG Daci_0833 928019 - 927507 - | peptide deformylase Daci_0834 928219 - 929424 + | peptidoglycan-binding LysM Daci_0835 929450 - 930667 + | DNA protecting protein DprA TERM 707 930770 - 930712 - T 78 -13.7 -3.14229 | gap 2, overlap 930710 AGATGCCGAGCAAGA GCCGCCTCGCGGTGG-GGGCGCCTA-GCC GAG GGCATCGTCCCCCTCCCCCGCGAAGCGGG TAGAGAGGCGCCGTG Daci_0836 933216 - 930811 - | hypothetical protein TERM 708 930995 - 931036 + g 73 -12.4 -3.4072 | gap 3, opp_overlap 930981, overlap 930978 AGGTGCAGCTGCTTG CGGCG-GCTGCG-CCAGGTGT ATT GCACCTGGATGC-GCGCGCCG TTGTGGTCCAGCGTG TERM 709 932017 - 932038 + g 72 -8.7 -4.07885 | opp_overlap 932016 GGCCTGGAACATCAG GGCCACGAT CTCG ATGGTGGCC TTTTCGCCCGAGGTG TERM 710 932451 - 932428 - G 73 -16 -2.62184 | gap 1 GTTGGGCGGATAGGA GGCGGCAGCGC CCG GCGC-GCCGCC CATCTGCGTGGGCGC TERM 711 932819 - 932866 + g 95 -17.9 -3.78934 | gap 2, opp_overlap 932817, overlap 932823 932824 AGCGTATCGAAGACG GGTGCCGTGGCCTCCCCCATGGC CAGC GCCATGCGGGAGGCCA-GG-ATC TTGTTCTCCACCACA TERM 712 932823 - 932864 + g 93 -18.7 -3.4811 | opp_overlap 932817, overlap 932819 932824 TATCGAAGACGGGTG CCGTGGCCTCCCCCATGGC CAGC GCCATGCGGGAGGCCAGGA TCTTGTTCTCCACCA TERM 713 932824 - 932863 + g 87 -22.2 -2.68545 | opp_overlap 932817, overlap 932823 932819 ATCGAAGACGGGTGC CGTGGCCTCCCCCATGGC CAGC GCCATGCGGGAGGCCAGG ATCTTGTTCTCCACC TERM 714 933190 - 933149 - G 100 -21.8 -3.76952 | gap 2 CGCACCCAATGCAAA CGCGCCTGCTGGC--CCAGT GAAG ACTGGGTGCCAGCAGGCGCG TTGGAAGGGGTGGGC Daci_0837 934206 - 933256 - | preprotein translocase subunit SecF Daci_0838 936142 - 934220 - | preprotein translocase subunit SecD TERM 715 936215 - 936183 - R 100 -15.6 -4.48221 | gap 1, overlap 936175 936170 CAGCAACGCACAAAA GGGTGTGCTG-CCGC CTGC GCGGTCCGCACACCC GCAAGACAGGGACAG Daci_0839 936569 - 936234 - | preprotein translocase, YajC subunit TERM 716 936674 - 936703 + r 70 -4.9 -4.56775 | gap 1, overlap 936676 GTCAGCCCTGACCCA CATG-GGCTGCCAG GAT CTGGCGGCTGCGGG TTTTTCGGCGACGAT TERM 717 936709 - 936743 + r 76 -7.2 -4.57569 | gap 2 CGGCTGCGGGTTTTT CGGCGACGATGGCTGC AACTG GCTGCCATC-T-GCCG TTTTTAAAGGGGTGG Daci_0840 940482 - 936901 - | indolepyruvate ferredoxin oxidoreductase Daci_0841 940671 - 941174 + | AsnC family transcriptional regulator TERM 718 941264 - 941247 - f 100 -7.7 -5.25656 | gap 1 AAAAGGAGCAAAAAA CGCC-TGC CGC GCAAGGCG GTGATCGTGGTTCTT TERM 719 942466 - 942500 + G 73 -15.8 -2.62184 | gap 1 GCCCAATGTCTACAT G-GCCGTGCCGGCCA TGATGC TGGCCGGCATGGCGC TGATCTCCACCGCCA Daci_0842 941336 - 943096 + | protein of unknown function DUF894 DitE Daci_0843 944594 - 943344 - | MltA domain-containing protein Daci_0844 944844 - 945578 + | OmpA/MotB domain-containing protein TERM 720 945620 - 945602 - f 87 -17.4 -3.05384 | opp_overlap 945602 CTGGCCCGGATGCAA CGCCCCGC AAC GCGGGGCG TTTTTGCGTGGGCGG TERM 721 945602 - 945620 + F 100 -17.4 -4.65895 | opp_overlap 945602 CTGGCCCGGATGCAA CGCCCCGC AAC GCGGGGCG TTTTTGCGTGGGCGG Daci_0845 945684 - 946958 + | putative D-serine deaminase (d-serine dehydratase) protein Daci_0846 947593 - 946964 - | two component LuxR family transcriptional regulator Daci_0847 949679 - 947610 - | PAS/PAC sensor signal transduction histidine kinase Daci_0848 950512 - 949697 - | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase Daci_0849 954663 - 950509 - | hypothetical protein TERM 722 951194 - 951169 - G 71 -11.9 -3.61178 | gap 1 GCCAGGCATGTCAAA GCG-CGTGAGCA GCT TGCCCACGTCGC GCAGGTCCAGCTGGA TERM 723 953582 - 953605 + g 74 -13.8 -3.28712 | TGCTCGCCCAGCGCC CCCTGCGTGC TGGC GCCCGCAGGG TTGTAGCGCGCGCGC TERM 724 955822 - 955855 + G 83 -8.7 -4.59109 | gap 1, opp_overlap 955826 955827 CGGCCTCATGAGCCA GGAAGTGGCCGACGCC CTG GGCG-CGGCCTATACC TTTTTGCGCCGTGTC Daci_0850 954767 - 957532 + | (glutamate--ammonia-ligase) adenylyltransferase TERM 725 957806 - 957818 + T 84 -3.3 -5.24129 | CTTTATTCGTTTCGG GATGC TTC GCAAC TTTTTTATGCCAGCA TERM 726 957838 - 957856 + T 100 -16 -5.45652 | opp_overlap 957838 TTATGCCAGCAAAAA GGCCACCC ATC GGGTGGCC TTTTTTGTTGCCGCT TERM 727 957856 - 957838 - T 100 -16 -4.7373 | opp_overlap 957838 TTATGCCAGCAAAAA GGCCACCC ATC GGGTGGCC TTTTTTGTTGCCGCT Daci_0851 958527 - 957907 - | glutathione S-transferase domain-containing protein TERM 728 957937 - 957955 + g 71 -11.7 -3.6502 | opp_overlap 957937 GCGTGTGGTCGCAAA GCTGGCG CGTTC CGCCAGC TTTGCCTGCAAGGTG TERM 729 959948 - 959926 - g 72 -13.4 -3.14564 | overlap 959938 GCACCGCCTGATCAA CGGCCTGGAA ATC CCCCAGGCCG ACAAGGACCGCCTGC Daci_0852 958577 - 960022 + | adenylosuccinate lyase Daci_0853 960027 - 961103 + | acyltransferase 3 Daci_0854 961131 - 961691 + | YaeQ family protein Daci_0855 962431 - 961718 - | hypothetical protein TERM 730 962529 - 962494 - R 76 -9 -4.10657 | gap 1, overlap 962499 GCAGACGCGTGAAAA TCCAACCGCCTTCAGCC TAG GGATGAAGGCGGC-GCA AGAAGAGCGGATTCA TERM 731 962525 - 962499 - R 93 -16.6 -3.36823 | overlap 962494 CGCGTGAAAATCCAA CCGCCTTCAGCC TAG GGATGAAGGCGG CGCAAGAAGAGCGGA Daci_0856 963274 - 962843 - | hypothetical protein TERM 732 963460 - 963470 + H 75 -8.2 -4.20368 | TTTTTTCACTTGCGT GCCG CAG CGGC TTTGTGTTGCAATCC Daci_0857 963786 - 964526 + | integral membrane protein TerC TERM 733 965023 - 965004 - g 79 -15 -3.27298 | overlap 965008 CGCCCCAAGCAGGAA GCCACGGC TCCC GCCGTGGC GCCTGCCGCCCCGCT Daci_0858 964662 - 965120 + | hypothetical protein TERM 734 965168 - 965192 + F 100 -17.2 -4.74801 | CGATCACTCTCAGGA CGGCATCCCG GAAAA CGGGATGCCG TTTTTCATGGGGTTC Daci_0859 965273 - 965620 + | membrane protein of unknown function Daci_0860 967219 - 965594 - | peptidase M48 Ste24p Daci_0861 967372 - 967842 + | molybdenum cofactor biosynthesis protein C Daci_0862 967920 - 968222 + | hypothetical protein TERM 735 968926 - 968939 + G 100 -2.3 -5.53991 | GCCATGCAGTTGAAT TCCAG TGTG CCGGA TTTTTTTAGTAACTA Daci_0863 968239 - 970182 + | TPR repeat-containing protein TERM 736 970321 - 970346 + T 95 -11.9 -4.63932 | opp_overlap 970321 CTTGCTGATAAAAAA GGGTGATGTGA AAAA TCACACCACCC TTTTCTTGAAAGCTA TERM 737 970346 - 970321 - T 100 -14.1 -5.24129 | opp_overlap 970321 CTTGCTGATAAAAAA GGGTGATGTGA AAAA TCACACCACCC TTTTCTTGAAAGCTA Daci_0864 970879 - 970388 - | pilin Daci_0865 971817 - 971104 - | FHA domain-containing protein TERM 738 971141 - 971183 + g 71 -10.4 -3.74747 | TGCGTACCTGCCAGT TCCACCGTGTCGCCATGCTG CAG CGGCATGGCGCGGCGGCCGA TTTCCTGGCCGTTGA Daci_0866 972942 - 972061 - | protein serine/threonine phosphatase TERM 739 972705 - 972724 + g 70 -12.8 -3.28924 | opp_overlap 972690 GGCTGATGGCCATGG CGCTGGCG ACTT CGCCGGCG TTGTAGCCGCCCATG TERM 740 973101 - 973082 - R 100 -13.6 -5.04601 | opp_overlap 973082 CTCACAAAGCAAAAA CGCACTGC CGAG GCAGTGCG TTGTGGAGGTGGCGA TERM 741 973082 - 973101 + r 81 -13.6 -3.31144 | opp_overlap 973082 CTCACAAAGCAAAAA CGCACTGC CGAG GCAGTGCG TTGTGGAGGTGGCGA Daci_0867 973831 - 973139 - | integral membrane protein TerC TERM 742 973883 - 973859 - R 100 -13.6 -4.15565 | gap 1, opp_overlap 973859 GTTATGAGTTGAAAA GCGCCAG-GGC GGTG GCCTCTGGCGC TTTTTCTTTTTTGGA TERM 743 973859 - 973883 + r 100 -13.6 -5.75538 | gap 1, opp_overlap 973859 GTTATGAGTTGAAAA GCGCCAG-GGC GGTG GCCTCTGGCGC TTTTTCTTTTTTGGA Daci_0868 974891 - 973998 - | succinyl-CoA synthetase subunit alpha TERM 744 974166 - 974184 + g 76 -13.2 -3.44274 | opp_overlap 974169, overlap 974169 GGTGACACCAGCGAT GAAGCCGA CGA TCGGCTTC TTCATGTTGTCCTTG TERM 745 974169 - 974181 + g 70 -9.1 -3.84271 | opp_overlap 974169, overlap 974166 GACACCAGCGATGAA GCCGA CGA TCGGC TTCTTCATGTTGTCC Daci_0869 976072 - 974912 - | succinyl-CoA synthetase subunit beta TERM 746 975439 - 975455 + g 70 -12.3 -3.26947 | TGAACTTCGCGTCCA GGGCAAC CAC GTTGCCC TTGCTGTCACGGTTC TERM 747 976260 - 976286 + H 71 -6 -4.41348 | gap 1, opp_overlap 976272, overlap 976256 TGCAATGCATTGATA TGTCAGGGAAA AGACGG TTTCCC-GACA TTTCTTTCAGGCGCC Daci_0870 976509 - 977441 + | N-acetyl-gamma-glutamyl-phosphate reductase Daci_0871 977438 - 979324 + | hypothetical protein TERM 748 979901 - 979941 + G 81 -9.6 -4.33274 | gap 1, opp_overlap 979931 GCCCTGCTATTCGCT GGCTGCGCGGCGCTGGGGC GGTG GCCACAATGCCGTG-GGCC TTTTCCTGATATGGA TERM 749 980160 - 980195 + G 79 -14.6 -3.28924 | TTCTCGGCGCTGCTG GCCAGTGCCTGGCTGC AGGT GCAGCCAGGCTGGGGC TTCTGGCAGGGCGTG Daci_0872 979347 - 980267 + | hypothetical protein Daci_0873 980740 - 980264 - | regulatory protein RecX TERM 750 980807 - 980776 - R 85 -2 -5.4505 | GTCCCGAATAAAAAA GGCCCCCACGCTCC CCTT GCTGCGCAAGGTCC GCTGCCCCCCAAGGG TERM 751 980808 - 980828 + r 100 -13.9 -5.15969 | TGCTGCGCAAGGTCC GCTGCCCCC CAA GGGGGCCGC TTTTTTGCCTTGGGG TERM 752 980883 - 980862 - R 100 -13.7 -5.24129 | CCCGGCGATAAAAAA GGCGCAGAC GTGA GCCTGCGCC AAGATGGCAAACACA Daci_0874 982046 - 980943 - | recA protein TERM 753 981756 - 981771 + g 72 -6.1 -4.35524 | opp_overlap 981753 GGCGTCGATGAAGGC GCAGG TGCCGC CCTGC TTTTGCATTTCGGCG Daci_0875 982194 - 982694 + | MarR family transcriptional regulator Daci_0876 982794 - 983468 + | two component transcriptional regulator TERM 754 984780 - 984802 + G 87 -9.1 -4.71426 | overlap 984749 984781 GGTCACGGTGCGCGT GCTGGCCGA TCCCT TCGGCCAGG TTTTGTTGCTGCAGG TERM 755 984781 - 984801 + G 73 -12.6 -3.42374 | overlap 984749 984780 GTCACGGTGCGCGTG CTGGCCGA TCCCT TCGGCCAG GTTTTGTTGCTGCAG Daci_0877 983563 - 985065 + | histidine kinase Daci_0878 986032 - 985022 - | LysR family transcriptional regulator TERM 756 985617 - 985591 - G 79 -2.3 -4.86731 | gap 1, opp_overlap 985591 CGTCGCCAAACAAAA TTGCGCAGTCCA GCCC CGGACTGT-CAA ATTGGTAGCTGTGTA Daci_0879 986142 - 987110 + | hypothetical protein Daci_0880 987278 - 988210 + | N-formylglutamate amidohydrolase TERM 757 988235 - 988260 + T 100 -20.5 -5.1861 | opp_overlap 988235 GAGTGAAATGCAAAA GGCCCGCGATC ACAG GATCGCGGGCC TTTTTTCATCGTGCC TERM 758 988260 - 988235 - T 100 -20.5 -4.36595 | opp_overlap 988235 GAGTGAAATGCAAAA GGCCCGCGATC ACAG GATCGCGGGCC TTTTTTCATCGTGCC Daci_0881 989041 - 988286 - | sporulation domain-containing protein Daci_0882 989906 - 989076 - | biotin--acetyl-CoA-carboxylase ligase Daci_0883 990661 - 989903 - | nuclear protein SET TERM 759 990476 - 990454 - G 70 -12 -3.33492 | CTACGTACTCGACAA GGACCTCGCC TTC GGCAAGATCC TGCACGGCGAAGACG TERM 760 993344 - 993325 - g 75 -9.2 -4.15044 | overlap 993341 GCGCCTGCCAAGAAA GCCGCGGC CAAG ACCACGGC AAAGACGGCCACCAA Daci_0884 990694 - 993621 + | DNA topoisomerase III TERM 761 993837 - 993856 + G 77 -15 -3.14132 | GAAATGCTCACCCCG GCAGCGGC TGCC GCCGCTGC TTCCTCCCCGGCGCC Daci_0885 993777 - 994604 + | protein tyrosine/serine phosphatase TERM 762 994942 - 994967 + F 87 -10.3 -4.30719 | overlap 994930 CGGCGGGCAGGAGCC GGGTTTCGGCC CGGC GGCCGACTCCC TTTCTTATCGCGCGA Daci_0886 995110 - 996297 + | integrase catalytic region TERM 763 996490 - 996465 - T 74 -11.9 -3.50734 | gap 1, overlap 996461 AAGCTAGACAACGAA GCAGCCCTGTCC TTC GG-CAAGGCTGC CACCCCGCATCCCGC Daci_0887 999164 - 996639 - | peptidoglycan glycosyltransferase TERM 764 997249 - 997268 + g 70 -9.2 -3.85698 | overlap 997250 ATGCCGTAGCGCTGG CGCACGGC CACG GCCGTGCC TTTGTCCACCACGGA TERM 765 997987 - 998035 + g 72 -14.7 -2.87463 | gap 3 TTGTCCGTTGCCTTG TCCTTGCCTTGGCCGT-CCGCGCG TTTG CGCGCGGCACG-CC-AGGCGGGGG TCTCTCGCACCAGTT TERM 766 999201 - 999174 - R 87 -17.1 -3.07962 | GCGCATATTGCAAGA CGGCCCTGATG ACAGGA CATCAGGGCCG ATAGGGCGGGACCAT TERM 767 999273 - 999248 - R 100 -16.1 -5.43866 | opp_overlap 999249 999264, overlap 999249 GAATGCCCAAAAAAA CGGCACCCCGC TCGC GCGGGGTGCCT TGCCTATGGGCCAAG TERM 768 999272 - 999249 - R 100 -19.6 -3.85235 | opp_overlap 999249 999264, overlap 999248 AATGCCCAAAAAAAC GGCACCCCGC TCGC GCGGGGTGCC TTGCCTATGGGCCAA TERM 769 999249 - 999272 + r 90 -19.6 -3.12351 | opp_overlap 999249 999248, overlap 999264 AATGCCCAAAAAAAC GGCACCCCGC TCGC GCGGGGTGCC TTGCCTATGGGCCAA Daci_0888 999913 - 999329 - | Ferritin Dps family protein TERM 770 1000010 - 999975 - H 73 -10.3 -3.6502 | opp_overlap 999981 1000005, overlap 999976 CACCTGCCAGCGAAA CGGGACCAGGCGGGC CGATGT GCCCGCCTGTTGCCT TCCAAGGTAAGTTTT TERM 771 1000009 - 999976 - H 73 -13.8 -2.78798 | opp_overlap 999981 1000005, overlap 999975 ACCTGCCAGCGAAAC GGGACCAGGCGGGC CGATGT GCCCGCCTGTTGCC TTCCAAGGTAAGTTT TERM 772 999981 - 1000004 + H 82 -15.3 -3.17392 | opp_overlap 999976 999975 CCAGCGAAACGGGAC CAGGCGGGC CGATGT GCCCGCCTG TTGCCTTCCAAGGTA Daci_0889 1000140 - 1000646 + | glutathione peroxidase TERM 773 1000889 - 1000862 - g 76 -7.7 -4.2558 | gap 1 CACCGCCCAGGAAAA GCCCGTGGTCCA GTTCA TTG-CCACGGGC GGCACCATCGCCATG Daci_0890 1000776 - 1001840 + | asparaginase TERM 774 1001866 - 1001894 + F 100 -16.8 -3.85698 | gap 1 AGGCCGCCGCAACCC TGCCGCGC-AGGC CCTG GCCTTGCGCGGCA TTTCTGGCGGGGCAC Daci_0891 1001954 - 1002412 + | RDD domain-containing protein TERM 775 1002422 - 1002449 + T 72 -13.4 -2.60496 | gap 1, overlap 1002421 1002417 1002423 CGCTGACATGCACCT CA-GGCGCGCCCG CAG CGGGCGCTCCGTG CTATTTCAACGGCAG TERM 776 1002423 - 1002447 + T 70 -12.7 -2.84325 | overlap 1002422 1002421 1002417 GCTGACATGCACCTC AGGCGCGCCCG CAG CGGGCGCTCCG TGCTATTTCAACGGC Daci_0892 1002893 - 1002450 - | hypothetical protein Daci_0893 1003695 - 1003087 - | hypothetical protein TERM 777 1003868 - 1003906 + r 100 -14.9 -4.17048 | opp_overlap 1003856, overlap 1003855 AATCGAAAGAGCCTT TTTCGGTACGTTTCT CAAAAAACC AGAAACGTACCGAAA TTCTTTTCAAAACAA Daci_0894 1007448 - 1003951 - | SMC domain-containing protein TERM 778 1006172 - 1006214 + g 71 -11 -3.55444 | overlap 1006200 CTGACGCGGGCCTGG GCGTCGGTGGCGGCTTGGAC CTG GGCCGTGCCGGCTTCGGCGC TTTGCGCCATGCGGG Daci_0895 1008722 - 1007445 - | exonuclease subunit SbcD TERM 779 1008239 - 1008252 + g 76 -8.1 -4.25848 | ACTCGATGGCGGCTT GCAGC GCCT GCTGC TTTTGCTCGGCGCTT TERM 780 1008370 - 1008326 - G 77 -17.9 -2.62616 | gap 2, overlap 1008309 GCAGGGCGCAGACGA TGCAGCCG-GGCG-CGGCCGG CTGCC CCGGCCGGCGCCGCAGCGGCA GCTCGACCACGTGGC Daci_0896 1008862 - 1009248 + | glyoxalase/bleomycin resistance protein/dioxygenase TERM 781 1009228 - 1009271 + T 78 -2.2 -5.02074 | gap 1, overlap 1009230 1009232 1009253 AAGCTGTGCCTGTTG CATCGGCCGCCGAAGGCCTGA GTT TCTGACCGT-GCCGGACGGTG TTTTTTCGGCGCTGG TERM 782 1009352 - 1009311 - T 71 -6.7 -4.24002 | gap 1, opp_overlap 1009317, overlap 1009317 GTCGAAACGCCAAAA TGCAAACAGCCGATGTGC CATCGCT GCAC-TCGGCTGTTTTTA TTGCGGTTGGCCAAG TERM 783 1009317 - 1009346 + T 100 -10.1 -5.10208 | gap 1, opp_overlap 1009317 1009311 ACGCCAAAATGCAAA CAGCCGATGTGC CATCGCT GCAC-TCGGCTG TTTTTATTGCGGTTG TERM 784 1009346 - 1009317 - T 78 -10.1 -3.93061 | gap 1, opp_overlap 1009317, overlap 1009311 ACGCCAAAATGCAAA CAGCCGATGTGC CATCGCT GCAC-TCGGCTG TTTTTATTGCGGTTG Daci_0897 1009828 - 1009388 - | hypothetical protein TERM 785 1009734 - 1009750 + g 75 -5.8 -4.48823 | AGTGGGCACAGTGGC GGCTCG AACTC TGAGCC TTTTGTGCATTGATT Daci_0898 1010428 - 1010132 - | hypothetical protein Daci_0899 1010795 - 1011442 + | methyltransferase type 12 Daci_0900 1011451 - 1012296 + | DTW domain-containing protein Daci_0901 1012807 - 1013955 + | acyltransferase 3 TERM 786 1013984 - 1014003 + T 100 -12.2 -5.64274 | opp_overlap 1013984 GCCGAAAGCAAAAAA GGGAACGT TGGC ACGTTCCC TTTTTTTGTGGGTGA TERM 787 1014003 - 1013984 - T 100 -12.2 -5.37593 | opp_overlap 1013984 GCCGAAAGCAAAAAA GGGAACGT TGGC ACGTTCCC TTTTTTTGTGGGTGA Daci_0902 1014684 - 1014037 - | hypothetical protein Daci_0903 1016272 - 1014884 - | hypothetical protein TERM 788 1016345 - 1016322 - R 71 -6.8 -4.21275 | opp_overlap 1016339, overlap 1016315 TTAATTTATTGAAAA TCAAGGATTT ATGC AAATCCGTGA ATGGATATATGAATA TERM 789 1016388 - 1016371 - R 100 -14.1 -5.80248 | GAATAGATAAAAAAA CCGCGCC CAAG GGCGCGG CAAAGCTGGATTTCG Daci_0904 1017635 - 1016553 - | porin TERM 790 1017869 - 1017835 - H 93 -7.8 -5.00616 | opp_overlap 1017835, overlap 1017837 1017839 GTCGCTCTCAAAAAA CATAGCGCCATGCGTA TGG CATGCATGGCGCTTCA GGGTTTCGTGTCGGG TERM 791 1017867 - 1017837 - H 80 -10.4 -4.13561 | opp_overlap 1017835, overlap 1017835 1017839 CGCTCTCAAAAAACA TAGCGCCATGCGTA TGG CATGCATGGCGCTT CAGGGTTTCGTGTCG TERM 792 1017865 - 1017839 - H 82 -13 -3.66166 | opp_overlap 1017835, overlap 1017837 1017835 CTCTCAAAAAACATA GCGCCATGCGTA TGG CATGCATGGCGC TTCAGGGTTTCGTGT TERM 793 1018319 - 1018350 + G 73 -15.8 -2.62616 | opp_overlap 1018274 CACCACCTACGCCAG CGCGCTGGCCGAGC AGGC GCTGGGCCAGCTCG TGCTCTACCAGCTGC Daci_0905 1017855 - 1018478 + | hypothetical protein TERM 794 1018464 - 1018493 + T 89 -12.8 -4.07975 | gap 1, opp_overlap 1018460 CTGGTCCAGAAGCCC GTCGCGCCGC-GC TGAGC GCAGCGGCGCGCC TTTGTCCTTCCCTTC Daci_0906 1019504 - 1018518 - | hypothetical protein Daci_0907 1019647 - 1020369 + | glutathione S-transferase domain-containing protein TERM 795 1020433 - 1020467 + F 85 -5.4 -5.06414 | opp_overlap 1020427 1020426 1020455 1020456 1020459, overlap 1020430 TTTCAAAACCGGCGC GGGGGCCGCATCTGTC CGA GAATGCAGCGCCCCCC TTTTTCTTGCGGGCG Daci_0908 1020502 - 1021548 + | pirin domain-containing protein Daci_0909 1022027 - 1021575 - | carboxymuconolactone decarboxylase Daci_0910 1023420 - 1022044 - | fumarate lyase Daci_0911 1024453 - 1023437 - | hypothetical protein Daci_0912 1024545 - 1025456 + | LysR family transcriptional regulator Daci_0913 1025514 - 1026038 + | peptidylprolyl isomerase, FKBP-type TERM 796 1026118 - 1026081 - T 100 -19.9 -3.53444 | opp_overlap 1026082 1026088, overlap 1026082 1026084 1026088 GCACGGCCCCGCAAA GCACAAAGGCCGCCTGG CATG CCCGGCGGCCTTTGTGT TTTCCGACTAGACCG TERM 797 1026117 - 1026082 - T 100 -23.4 -2.71924 | opp_overlap 1026082 1026088, overlap 1026081 1026084 1026088 CACGGCCCCGCAAAG CACAAAGGCCGCCTGG CATG CCCGGCGGCCTTTGTG TTTTCCGACTAGACC TERM 798 1026082 - 1026117 + T 100 -23.4 -4.11216 | opp_overlap 1026082 1026081 1026084 1026088, overlap 1026088 CACGGCCCCGCAAAG CACAAAGGCCGCCTGG CATG CCCGGCGGCCTTTGTG TTTTCCGACTAGACC TERM 799 1026115 - 1026084 - T 95 -20.2 -2.90496 | opp_overlap 1026082 1026088, overlap 1026082 1026081 1026088 CGGCCCCGCAAAGCA CAAAGGCCGCCTGG CATG CCCGGCGGCCTTTG TGTTTTCCGACTAGA TERM 800 1026111 - 1026088 - T 95 -15.2 -4.13654 | opp_overlap 1026082 1026088, overlap 1026084 1026082 1026081 CCCGCAAAGCACAAA GGCCGCCTGG CATG CCCGGCGGCC TTTGTGTTTTCCGAC TERM 801 1026088 - 1026111 + T 100 -15.2 -4.45168 | opp_overlap 1026088 1026084 1026082 1026081, overlap 1026082 CCCGCAAAGCACAAA GGCCGCCTGG CATG CCCGGCGGCC TTTGTGTTTTCCGAC Daci_0914 1026971 - 1026126 - | protocatechuate 4,5-dioxygenase subunit beta Daci_0915 1027360 - 1027019 - | protocatechuate 4,5-dioxygenase subunit alpha TERM 802 1027661 - 1027718 + Gr 70 -10.4 -3.53012 | gap 1 CCATGCGCTGGCGCT GCAGGACCCGGCGCGCGAGCTGCTGCG GCAGA TGCAGCAGTTCG-GCCAGGGGCCCAGC TTTGACCCCGCGCAC Daci_0917 1029239 - 1028358 - | peptidase C26 Daci_0916 1027437 - 1028456 + | LysR family transcriptional regulator TERM 803 1029182 - 1029164 - Gf 80 -10.2 -4.07568 | TCTTGCCCGTGAAAA GCGGACGC TGC GGGTCCGC ATGGGAGAAACAGGC TERM 804 1029377 - 1029394 + FH 70 -4.1 -4.68424 | overlap 1029378 TGAATGCAAGAGTTG TCTTGAG GCAT CTCAAGC TTTTTCCGTCCATTC TERM 805 1029494 - 1029481 - fH 70 -3.8 -4.59773 | opp_overlap 1029487 CTGCAGCGCGAAAAA CCTG ACGACG CAGG GTGCGACTTGCTGTG TERM 806 1029570 - 1029588 + FH 95 -13.8 -4.09685 | opp_overlap 1029566 GGCCCCGACAACCCC GCCGCGCC GGT GGTGCGGC TTTTGGCGACTAGGA Daci_0918 1029612 - 1029992 + | ribosomal subunit interface protein, putative TERM 807 1030047 - 1030017 - T 89 -11 -4.1891 | opp_overlap 1030023, overlap 1030013 TCCCCGCAACACAAA CGGCAAGGCGCCCC ATT GGGGCGCCTTTTTG TTGGGCAGGGCCATG TERM 808 1030023 - 1030041 + T 100 -17.4 -5.06414 | opp_overlap 1030017 1030013 CAACACAAACGGCAA GGCGCCCC ATT GGGGCGCC TTTTTGTTGGGCAGG Daci_0919 1031109 - 1030093 - | pirin domain-containing protein TERM 809 1031177 - 1031218 + H 89 -17.9 -3.01712 | gap 1, opp_overlap 1031180 1031181 1031184 TTGTTTACATTCGAA GAACGGACCGGCGCCCGCCA TTT TGGCGGGCGCCGG-CCTCAC TCTTACAGGAGAAAC TERM 810 1031217 - 1031180 - H 100 -23.5 -3.66844 | gap 1, opp_overlap 1031177, overlap 1031181 1031184 TTTACATTCGAAGAA CG-GACCGGCGCCCGCCA TTT TGGCGGGCGCCGGCCTCA CTCTTACAGGAGAAA TERM 811 1031214 - 1031181 - H 100 -26.1 -2.79785 | gap 1, opp_overlap 1031177, overlap 1031180 1031184 TTACATTCGAAGAAC GGACCGGCGCCCGCCA TTT TGGCGGGCGCCGG-CC TCACTCTTACAGGAG TERM 812 1031212 - 1031184 - H 100 -27.5 -2.66106 | opp_overlap 1031177, overlap 1031181 1031180 CATTCGAAGAACGGA CCGGCGCCCGCCA TTT TGGCGGGCGCCGG CCTCACTCTTACAGG Daci_0920 1031238 - 1031534 + | hypothetical protein TERM 813 1031589 - 1031564 - T 95 -12.5 -4.14739 | opp_overlap 1031564 CCATCCACTCCAAAA GCCCTGCGGCC TGAC AGCTGCAGGGC TTTTTGCATGATGGC TERM 814 1031564 - 1031589 + T 100 -14 -4.68593 | opp_overlap 1031564 CCATCCACTCCAAAA GCCCTGCGGC CTGACA GCTGCAGGGC TTTTTGCATGATGGC Daci_0921 1032026 - 1031616 - | OsmC family protein Daci_0922 1032979 - 1032083 - | beta-lactamase domain-containing protein Daci_0923 1033065 - 1033382 + | transcriptional regulator, TrmB TERM 815 1033856 - 1033877 + G 73 -7.9 -4.14392 | CGTGGGCTGCGGCCT GATCGTGGC CGGT GCCACGGGC TTTTGCGGATTGGCG Daci_0924 1033410 - 1033940 + | rhodanese domain-containing protein TERM 816 1034309 - 1034339 + G 90 -14.1 -4.07568 | CCTGGGCCCCGAGGC CGCCGTGGC-CACGC TGG GCGTGAGCCA-GGCG TTTTCCAGCGCCGAG Daci_0925 1034040 - 1035422 + | peptidase M24 Daci_0926 1035415 - 1036233 + | abortive infection protein Daci_0927 1037501 - 1036236 - | hypothetical protein TERM 817 1037101 - 1037052 - G 75 -8.4 -4.23674 | overlap 1037046 1037048 1037053 GGTCACGAAGACAAA GCGCGCCGC-GCCGTCGAGCAGGC GCCC GCCTGCGGGCTGGCTGCG-CACGC GGAACAGGTGGGACT Daci_0928 1039354 - 1037693 - | AMP-dependent synthetase and ligase Daci_0929 1040334 - 1039351 - | hypothetical protein TERM 818 1039710 - 1039729 + g 81 -7.2 -4.60143 | gap 1 ACAGGAAATTGGTGC GCACGATCA GGA TG-TCGTGC TTTTCTATGGTGTGT TERM 819 1040246 - 1040266 + g 77 -14.7 -3.14564 | TCGTCGGGTCCCCAG CGTCCCCAG TTG CTGGGGGCG TTCCTGAGCAGATCC Daci_0930 1040708 - 1042144 + | pyruvate kinase TERM 820 1042182 - 1042210 + T 100 -16.8 -5.63517 | gap 1, opp_overlap 1042178 1042182 CAGTGATTGAACCCA CCCGGGACAGGCC CACA GGCCT-TCCCGGG TTTTTTGTTTCAGAG TERM 821 1042210 - 1042182 - T 83 -16.8 -2.55213 | gap 1, opp_overlap 1042182, overlap 1042178 CAGTGATTGAACCCA CCCGGGACAGGCC CACA GGCCT-TCCCGGG TTTTTTGTTTCAGAG Daci_0931 1042789 - 1042220 - | phosphoesterase PA-phosphatase related TERM 822 1042708 - 1042737 + g 71 -11.3 -3.60971 | opp_overlap 1042705 1042697 GCCAGGACGAGATGG CGCGCGCCGCCTC GATC GAGATGGCGGGCG TTTGCGCGTTGGCGT Daci_0932 1043578 - 1042802 - | PAP2 (acid phosphatase) superfamily protein-like protein TERM 823 1043303 - 1043246 - G 79 -18.3 -2.52023 | gap 1, overlap 1043245 CAGCGACAGCAAGAT GCCCGC-CACCAGCTGCACGCGCCGCCC ATG GGGCAGCAGGCGCAGCGGGCCCACGGGC CGCCAGACGCACAGC Daci_0933 1043609 - 1044370 + | two component transcriptional regulator Daci_0934 1044367 - 1045737 + | histidine kinase Daci_0935 1045819 - 1046931 + | fructose-bisphosphate aldolase, class II TERM 824 1046977 - 1046955 - T 100 -17.7 -5.00616 | opp_overlap 1046955 TTCCCCTTCAAAAAA GCCCGCCGG TCCGC CCGGCGGGC TTTTTTGCTTTCAGC TERM 825 1046955 - 1046977 + T 100 -17.7 -5.37593 | opp_overlap 1046955 TTCCCCTTCAAAAAA GCCCGCCGG TCCGC CCGGCGGGC TTTTTTGCTTTCAGC Daci_0936 1047824 - 1046988 - | putative integral membrane protein Daci_0937 1048775 - 1047957 - | nucleotidyl transferase TERM 826 1048905 - 1048879 - g 78 -8.7 -4.254 | overlap 1048875 CCAACACTCAACAAA TGGCGAATGCG ATCCG CGCACTCGCAA TGGATGCCGTTCAAC TERM 827 1050485 - 1050428 - g 72 -9.2 -4.03888 | gap 3, opp_overlap 1050479, overlap 1050483 GAGCCAGAAGAACAA GCCCACGGCCCTG-CTGCTGTCGCGCCAG AAC CTGGC-CTAC-GCAGCCAAGACCGAAGAC GCGCTGGACGACATC Daci_0938 1048860 - 1050905 + | transketolase TERM 828 1050941 - 1050907 - f 91 -14.2 -3.90112 | opp_overlap 1050917 GCGCCGGCAAGTAAA GCTGCGAGAAGGGGCC TGT GGCCCCTTTTTGCCGC CCGCCAGGCCCGGCC TERM 829 1050917 - 1050931 + F 100 -12.8 -4.56597 | opp_overlap 1050907 GTAAAGCTGCGAGAA GGGGCC TGT GGCCCC TTTTTGCCGCCCGCC TERM 830 1051618 - 1051593 - g 71 -9.7 -3.71848 | gap 1 CGGCCCCAGCAACAA GGACTGGCGCGG CGG CCGCGGCA-TCC TGGAAAACATCATTC Daci_0939 1051015 - 1052016 + | glyceraldehyde-3-phosphate dehydrogenase, type I TERM 831 1052062 - 1052087 + F 100 -20.5 -4.7254 | opp_overlap 1052018 AAGGGCCCTGCACCA GGCCGGCATCG GACG CGATGCCGGCC TTTTTCATGGAAGCT Daci_0940 1052141 - 1052677 + | hypothetical protein Daci_0941 1052732 - 1053118 + | export-related chaperone CsaA Daci_0942 1054093 - 1053119 - | hypothetical protein Daci_0943 1055343 - 1054090 - | amidohydrolase TERM 832 1055417 - 1055404 - R 76 -6.7 -4.4959 | overlap 1055398 1055405 GGCAACGAAGCAAAA CGCAT ATGC ATGCG CCCTGCATGCACAAG Daci_0944 1056379 - 1055486 - | LysR family transcriptional regulator TERM 833 1056236 - 1056248 + g 81 -3.3 -4.82901 | GGTGCGCCGTACCAG GGTGG TGG CCAGC TTTTTCTCCAGGCGC TERM 834 1056477 - 1056498 + H 77 -7.9 -4.32046 | overlap 1056480 CCAGACTGCAGTCTT CGGGGCGTG GTTC CGCGCCTTG TTTGCTTTTTGAAAG TERM 835 1056480 - 1056495 + H 75 -8.2 -4.26386 | overlap 1056477 GACTGCAGTCTTCGG GGCGTG GTTC CGCGCC TTGTTTGCTTTTTGA Daci_0945 1056520 - 1057341 + | aldo/keto reductase Daci_0946 1057498 - 1059177 + | AMP-dependent synthetase and ligase TERM 836 1059221 - 1059204 - T 89 -12.7 -4.07568 | opp_overlap 1059204 TGCCGTGTTTGAAAA GAGGCGC TGCG GCGCCTC TTTTCATTGGAAGGG TERM 837 1059204 - 1059221 + T 100 -12.7 -4.4078 | opp_overlap 1059204 TGCCGTGTTTGAAAA GAGGCGC TGCG GCGCCTC TTTTCATTGGAAGGG Daci_0947 1059392 - 1059246 - | hypothetical protein TERM 838 1059679 - 1059689 + G 72 -8.2 -4.07568 | overlap 1059674 GGAGTACGAGGCCCT GGCG CGG CGCC TTTTCGCCGAGAACC Daci_0948 1059413 - 1059778 + | AsnC family transcriptional regulator TERM 839 1059822 - 1059850 + F 100 -16.8 -3.68073 | gap 1, opp_overlap 1059822 TGCACCGGATGGAAA GGGCCGCCCATGC TCCT GCATG-GCGGCCC TTGTTGCATGCGATC TERM 840 1059850 - 1059822 - f 100 -16.8 -3.65902 | gap 1, opp_overlap 1059822 TGCACCGGATGGAAA GGGCCGCCCATGC TCCT GCATG-GCGGCCC TTGTTGCATGCGATC TERM 841 1059935 - 1059919 - f 78 -5.1 -4.7878 | CATGGATAAAACAAA TGGCG CCTTCCC CGCCA TGATCCACCGACGTT TERM 842 1060039 - 1060053 + G 79 -11.4 -4.07568 | opp_overlap 1060034 GAACAATGGATGGAG TCGCGC GTG GCGCGA TTTTCCACGCGCAAG Daci_0949 1059964 - 1060494 + | cupin 2 domain-containing protein TERM 843 1061028 - 1061016 - g 77 -3.3 -4.72272 | opp_overlap 1061025, overlap 1061020 1061025 GCCCTTCAGGAAAAA GGCAT CGA AGGCC TGGCCGCCGCCATCG Daci_0950 1060509 - 1061363 + | alpha/beta hydrolase fold TERM 844 1061961 - 1061941 - g 77 -15.5 -3.15544 | opp_overlap 1061933, overlap 1061918 CGCGACGTGCAGCAA CTGCAGCAG TTG CTGCTGCAG GACCGCGAGCGCGGC Daci_0951 1061386 - 1062192 + | IclR family transcriptional regulator TERM 845 1062168 - 1062179 + F 71 -5.8 -4.4009 | GGGCCACCTGCGCAC CCAG CATC CTGG TTTTCTGCGCTGAGG TERM 846 1062185 - 1062223 + F 76 -10.3 -3.71848 | gap 1, opp_overlap 1062197, overlap 1062186 AGCATCCTGGTTTTC TGCGCTGAGGAACTGGTG CTCC CACCGGC-CTTCAGCGCG TTCTTGCTCAGAAAG Daci_0952 1062241 - 1063044 + | L-aspartate dehydrogenase TERM 847 1063088 - 1063115 + F 85 -9 -4.70659 | opp_overlap 1063074, overlap 1063093 ATGGGCACTTTCGCC CCGCAGGCGGCC CCCG GGCCGCCTTTGC TTTTTGCCTGTGCCG TERM 848 1063093 - 1063110 + F 100 -14.1 -4.33653 | overlap 1063088 CACTTTCGCCCCGCA GGCGGCC CCCG GGCCGCC TTTGCTTTTTGCCTG TERM 849 1063242 - 1063198 - g 84 -16.3 -3.39449 | opp_overlap 1063192 CCGCAGGAACAGGAA GGCCTGGTCCATGCCCTGTCC GAC GCCCAGGGCACGGCCCACGCC GGCCGCATGTTCTGG Daci_0953 1063156 - 1063911 + | 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase TERM 850 1064041 - 1064031 - f 77 -3.2 -4.9138 | AGTAGGCAAAGAAAA GCAC CCG GTAC GACTCACACTCATAG Daci_0954 1064136 - 1065323 + | integrase catalytic region TERM 851 1065511 - 1065486 - T 78 -14.1 -3.25223 | gap 1, overlap 1065490 GAGTCAGATGACGAA GCAAGCCTGTCC TTC GG-CAGGCTTGC AACCCCGCAGGCGGC Daci_0955 1065877 - 1065602 - | hypothetical protein TERM 852 1066248 - 1066273 + H 78 -14.1 -3.25223 | gap 1 GGTGGTTGCGGGGTT GCAGTCCTG-CC GAA GGACAGGACTGC TTCGTCATCTGGCTC TERM 853 1066491 - 1066468 - H 74 -11 -3.53012 | overlap 1066445 GCCGCCGGGCCGAAA CCCGGCCT CTGCCCGC AGGCCGGG CATGCGTCCAAAGCA TERM 854 1066684 - 1066658 - H 91 -5.3 -5.4505 | gap 1 TGTTTCAAGAAAAAA GTGTC-ATTTCA AATT TGAAACAGACAC AAACCCCCTTCGATT Daci_0956 1066710 - 1067480 + | short chain dehydrogenase Daci_0957 1067493 - 1068380 + | IclR family transcriptional regulator TERM 855 1068735 - 1068756 + G 71 -2.9 -4.57073 | gap 1 CCTGAAGTTCTTCTC GGTGCTGCAT CCC ACGC-GCGCC TTTTTGCCGCAGCTC Daci_0958 1068373 - 1069170 + | short chain dehydrogenase TERM 856 1070333 - 1070323 - g 75 -8.2 -4.12188 | GCAGGAGCTGCAAAA GGCC GTG GGCC GCAACTTCAACTGGG Daci_0959 1069205 - 1070911 + | hypothetical protein TERM 857 1071151 - 1071141 - g 83 -4.6 -4.82901 | CTGGGCCCAGAAAAA GCCC CAT GAGC GCGCGGCAGTGCTGC Daci_0960 1070947 - 1072422 + | aldehyde dehydrogenase Daci_0961 1072435 - 1073409 + | glyoxalase/bleomycin resistance protein/dioxygenase Daci_0962 1073460 - 1074437 + | hypothetical protein TERM 858 1074495 - 1074539 + F 74 -11.2 -3.54424 | opp_overlap 1074487, overlap 1074478 1074496 GACGACACCCTCGGT GCGGGGCGGCCCTTCCTCGG TGTCC CTGAGGTCGGGCTGCGCCGG TTTCACGCGATACGG TERM 859 1074496 - 1074538 + F 77 -14.7 -2.72511 | opp_overlap 1074487, overlap 1074478 1074495 ACGACACCCTCGGTG CGGGGCGGCCCTTCCTCGG TGTCC CTGAGGTCGGGCTGCGCCG GTTTCACGCGATACG Daci_0963 1074622 - 1074843 + | hypothetical protein Daci_0964 1074868 - 1075893 + | Rieske (2Fe-2S) domain-containing protein Daci_0965 1075890 - 1076849 + | ferredoxin TERM 860 1077721 - 1077696 - g 73 -8.1 -4.18018 | GTGGGCCAGCGAAAA GCGCGGCGCCC TCAA GGTCACCGCCC TGCAGCTGGGCGTGA Daci_0966 1076929 - 1077996 + | porin Daci_0967 1078026 - 1079321 + | major facilitator transporter Daci_0968 1080237 - 1079329 - | LysR family transcriptional regulator Daci_0969 1080310 - 1080987 + | HAD family hydrolase Daci_0970 1081054 - 1082067 + | hypothetical protein TERM 861 1082274 - 1082226 - g 80 -16 -3.20307 | gap 2, overlap 1082220 1082224 TGAAGACCAGCAAGA GCG-TGCCCGTGGCCGCCG-CGCA GCG TGCGGCAGGGGCCTCGGGCATCAC GGTCTCCACCCTGAA Daci_0971 1082087 - 1083229 + | alanine racemase domain-containing protein Daci_0972 1083219 - 1083614 + | endoribonuclease L-PSP Daci_0973 1084635 - 1083649 - | magnesium and cobalt transport protein CorA Daci_0974 1085771 - 1084809 - | phage SPO1 DNA polymerase-related protein TERM 862 1084889 - 1084855 - G 76 -7.6 -4.36914 | overlap 1084856 CGGCCTGTCACAAAA GCCTGCGCATGGCACA GGT CGGCCCAGGCGCCGGC CTTGGCCTGGGGGGC Daci_0975 1086211 - 1085762 - | ribosomal-protein-alanine acetyltransferase Daci_0976 1087134 - 1086283 - | peptidase M22 glycoprotease TERM 863 1087677 - 1087695 + G 73 -8.1 -4.18018 | CATCGTGGGCGACAT CGTGCTG GACCG CAGCGCG TTTTCCGTGAGCGGC TERM 864 1087906 - 1087848 - g 70 -15.4 -2.73875 | gap 4, overlap 1087845 1087880 GCGGCTGCAATACGA TCCGCCGCTGGCCGGCATCCAGCAGCA-GG AAA CCGTGCCGCTGG-CGCCGGCCGGCAGCG-- AATGCGGCGACTGGC Daci_0977 1087249 - 1088661 + | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase TERM 865 1088686 - 1088705 + F 100 -15 -5.10004 | overlap 1088683 TTCGCGTCTTGTGCA GGGCCTGC TTTC GCAGGCCC TTTTTCATTGTTTTT TERM 866 1088884 - 1088873 - f 85 -5.8 -5.14563 | opp_overlap 1088873 1088871 GGCTTTAGCAAAAAA GCAC GGTC GTGC TATTCATAACACTTC TERM 867 1089839 - 1089825 - g 87 -8.5 -4.67904 | overlap 1089827 CACCAACGTGAAAAA GCCGG CCTGC CCGGC CACCGGCGTGGGCGC Daci_0978 1088914 - 1090047 + | GDSL family lipase Daci_0979 1090079 - 1090750 + | OmpW family protein TERM 868 1090796 - 1090769 - T 74 -11.4 -3.55444 | opp_overlap 1090775, overlap 1090775 GTCGCAGTCCCCAAA GAAAAACCAGCC CGCG GGCTGGTTTTTT CATGGAGCGGGCCTG TERM 869 1090775 - 1090790 + T 100 -10.4 -5.14563 | opp_overlap 1090769 1090775 GTCCCCAAAGAAAAA CCAGCC CGCG GGCTGG TTTTTTCATGGAGCG TERM 870 1090790 - 1090775 - T 100 -10.4 -5.27335 | opp_overlap 1090775, overlap 1090769 GTCCCCAAAGAAAAA CCAGCC CGCG GGCTGG TTTTTTCATGGAGCG Daci_0980 1092353 - 1090815 - | methylmalonate-semialdehyde dehydrogenase TERM 871 1093133 - 1093154 + G 75 -10.1 -4.07568 | gap 1 CAGACGCAGTACGCA CCGTCGTGCC CGT GGC-CGGCGG TTTTGCCGCCAACAA Daci_0981 1092436 - 1093410 + | LysR family transcriptional regulator Daci_0982 1094404 - 1093424 - | hypothetical protein Daci_0983 1095466 - 1094447 - | hypothetical protein TERM 872 1094590 - 1094607 + g 71 -2.5 -4.63486 | GCGTTTCGGGGTGGC GCAGGGC GGTG GCCAGGC TTTTGTTCAGGCGCT Daci_0984 1096314 - 1095511 - | myo-inositol catabolism IolB domain-containing protein Daci_0985 1098290 - 1096311 - | ribokinase-like domain-containing protein TERM 873 1098967 - 1098945 - g 78 -9.1 -4.24948 | overlap 1098938 GCAGCACACCGAAAA GCCCGTGCA CTGGC TGCACGGCC TGGGCGCCATGCAAA Daci_0986 1098385 - 1099284 + | RpiR family transcriptional regulator TERM 874 1099275 - 1099309 + T 82 -12 -3.89614 | opp_overlap 1099277 CGAGCCTTCGGTGAA GAGGTCCTAGGCGGCA GCG TTCCGCCCAGGGCCGC TTTGTGGGGGTTCAC TERM 875 1099307 - 1099277 - T 76 -13.2 -3.01791 | opp_overlap 1099275 AGCCTTCGGTGAAGA GGTCCTAGGCGGCA GCG TTCCGCCCAGGGCC GCTTTGTGGGGGTTC Daci_0987 1100025 - 1099321 - | hypothetical protein TERM 876 1100054 - 1100027 - R 76 -15 -2.52933 | opp_overlap 1100032, overlap 1100026 1100032 GTCCAAGCCACCAAT GAAAAGACCACC TTGC GGTGGCCTTTTC GCCCTAAGCCTGAGC TERM 877 1100049 - 1100032 - R 84 -9.1 -4.45945 | opp_overlap 1100032, overlap 1100027 1100026 AGCCACCAATGAAAA GACCACC TTGC GGTGGCC TTTTCGCCCTAAGCC Daci_0988 1101223 - 1100225 - | Sua5/YciO/YrdC/YwlC family protein Daci_0989 1102398 - 1101235 - | phosphoribosylaminoimidazole carboxylase ATPase subunit Daci_0990 1102892 - 1102395 - | phosphoribosylaminoimidazole carboxylase, catalytic subunit Daci_0991 1104364 - 1102976 - | hypothetical protein Daci_0992 1105347 - 1104361 - | ABC transporter related TERM 878 1105782 - 1105751 - g 83 -12.3 -4.09685 | CCCCATCCTGGAAAA GCTCGAAGTGGCC TACGAG GGCCGCTTCAAGC TGGTCAAGATCGACT Daci_0993 1105623 - 1106579 + | thioredoxin TERM 879 1106607 - 1106626 + T 100 -15 -4.72272 | opp_overlap 1106605 ACGGGTGAAGAGACG GGGGAGCC TTGC GGCTCCCC TTTTTCATGGCGAGG Daci_0994 1107462 - 1106644 - | hypothetical protein TERM 880 1107462 - 1107475 + g 75 -5.3 -4.66163 | CCATGGGTTCATCCA TCAAG TTTT CTTGA TTTTTCGATGGCGGT TERM 881 1107666 - 1107634 - g 77 -15 -3.14132 | gap 2 CGCGCGGCCGACGAA CTGG-GGCTGACC-CC GGC GGCGGTCAGCCACCAG ATCAAGGAGATGGAG Daci_0995 1107547 - 1108458 + | LysR family transcriptional regulator Daci_0996 1109358 - 1108462 - | LysR family transcriptional regulator Daci_0997 1109453 - 1110313 + | hypothetical protein Daci_0998 1110927 - 1110343 - | PfpI family intracellular peptidase TERM 882 1111043 - 1111028 - R 100 -9 -4.8622 | opp_overlap 1111028 GCCCGCAACGAAAAA GAGAGC CGAA GCTCTC TTTTGCGGGGAAAGG TERM 883 1111028 - 1111043 + r 76 -9 -4.07568 | opp_overlap 1111028 GCCCGCAACGAAAAA GAGAGC CGAA GCTCTC TTTTGCGGGGAAAGG Daci_0999 1112009 - 1111086 - | phosphoribosylaminoimidazole-succinocarboxamide synthase TERM 884 1112553 - 1112526 - g 86 -9.9 -4.53685 | gap 1, overlap 1112527 AAAGGAGAAGGAAAA GCGCCAACGTGC CGGTT GCACGCT-GCGC GTCAAGGGCCAGGAT Daci_1000 1112374 - 1112733 + | sigma 54 modulation protein/ribosomal protein S30EA TERM 885 1112807 - 1112822 + F 100 -11.8 -4.72986 | AGCCACGCACGACCA CCGCCC TTCG GGGCGG TTTTTGATGGGGGTC TERM 886 1112997 - 1112957 - g 84 -7.6 -4.77036 | gap 1 CGTCACCAGCAAAAA GCGCGCTTTCGAAGAAGCA GGTC TGCT-CTTCGAGAGCCTGC ATGGCCTGTCCCGCG TERM 887 1113165 - 1113191 + G 72 -9.4 -3.99324 | GGTTTCGATGCCCCC GATGAGCAGCCC GTG GGCCTGCTGATC TTTCTGCTGGTGCCC TERM 888 1113265 - 1113247 - g 71 -11 -3.5394 | AAATCCTGTCCGAAA TCGCCGAG CTT CTCAGCGA CAGCCAGCTGCGCGA Daci_1001 1112829 - 1113362 + | putative PTS IIA-like nitrogen-regulatory protein PtsN TERM 889 1113362 - 1113372 + F 84 -5.4 -4.90917 | TGCGCCCCTGGTCTA GTCT TCC AGAC TTTTTCCTTCCCTTT Daci_1002 1113403 - 1114359 + | HPr kinase/phosphorylase Daci_1003 1114513 - 1116789 + | TonB-dependent siderophore receptor TERM 890 1118258 - 1118311 + G 81 -8.1 -4.55287 | TCGCCGGCCGGCGAG GTGC-CGGGCTGGGTGCAGCGCC GCTATGCCCA GGAGCCGCG-CCAGCCCGTGCGC TTTTATCTGGATGCA Daci_1004 1116794 - 1118569 + | putative esterase Daci_1005 1118569 - 1119594 + | periplasmic binding protein TERM 891 1119657 - 1119674 + G 86 -12.7 -4.11216 | overlap 1119659 TGTCACGCCCCTCTC GCCAGGC CCTT GCCTGGC TTTTCGCGCTGGGCC TERM 892 1120093 - 1120123 + G 73 -10.5 -3.87815 | gap 2 CCTGGTCGGCCTGGT GCTGGCCGGCGTGCT GGA GGCA-GCCG-CCAGC TTTCTGGCGCTGCAG Daci_1006 1119575 - 1120624 + | transport system permease protein TERM 893 1121514 - 1121527 + G 84 -8.1 -4.75174 | overlap 1121513 CATGGGCGGGCAGGT GCTGC TGGA GCAGC TTTTTCAATTCAATA Daci_1007 1120621 - 1121619 + | transport system permease protein Daci_1008 1121616 - 1122374 + | ABC transporter related Daci_1009 1123721 - 1122555 - | S-adenosylmethionine--tRNA-ribosyltransferase-isomerase Daci_1010 1125013 - 1123754 - | metal dependent phosphohydrolase TERM 894 1124946 - 1124934 - G 81 -7.7 -4.56597 | overlap 1124937 1124938 CGGGTTCGCCAAAAA GGATG CTC CATCC AGGAGCCGCAGAACT TERM 895 1125670 - 1125632 - g 75 -6.5 -4.46212 | gap 1, opp_overlap 1125634, overlap 1125633 CCTCGCACCAGAAAA CCCTGTCCGTGGGCGCGC GGCT GCGCATCCGCGG-CGAGG TCAAGGGCGGCTTCT TERM 896 1126870 - 1126841 - g 71 -9.9 -3.76224 | overlap 1126842 CGCTGATCGAGGAAA GCGAGGCGCTGGA CCTG TCCAACGCCACGG CCACCCATGCCTATC Daci_1011 1125208 - 1127448 + | ATP-dependent DNA helicase RecG TERM 897 1128151 - 1128119 - g 73 -12.5 -3.53012 | opp_overlap 1128132 CGCGGCGGCCCGAAA GCGGGGCGCGCGTGC TGG GCGCGGGCACCCTGC TGGGCCTGGGCGTGG Daci_1012 1127785 - 1128558 + | putative integral membrane sensor protein Daci_1013 1128785 - 1129750 + | LysR family transcriptional regulator TERM 898 1129974 - 1129945 - g 74 -14.3 -3.34233 | overlap 1129916 1129963 CGACAAGGCGGACAA GGCAGTGCAGCCT GCAA AGGCCGCACTGGC CGACGTGGCACCGGC Daci_1014 1129871 - 1130476 + | Ferritin Dps family protein TERM 899 1130562 - 1130608 + G 100 -21.4 -5.76633 | overlap 1130563 CTGGATTGACGCACA CGCCGCCACGGGCGGCCTGTGC CTG GTACTGGCCGCCCTGGGCGGCC TTTTTTTCTATCTGC TERM 900 1130563 - 1130607 + G 100 -24.9 -4.04353 | overlap 1130562 TGGATTGACGCACAC GCCGCCACGGGCGGCCTGTGC CTG GTACTGGCCGCCCTGGGCGGC CTTTTTTTCTATCTG Daci_1015 1130536 - 1131333 + | phosphoesterase PA-phosphatase related Daci_1016 1131435 - 1132328 + | 4-hydroxybenzoate polyprenyl transferase TERM 901 1132371 - 1132348 - T 100 -11 -5.02074 | opp_overlap 1132351, overlap 1132351 TCAGCGCTGAAAAAA CAAGGGAGGC CGGT GCCTCCCTTT TGCATGAAGCCTGGG TERM 902 1132351 - 1132368 + T 95 -12.7 -4.18197 | opp_overlap 1132348 1132351 GCGCTGAAAAAACAA GGGAGGC CGGT GCCTCCC TTTTGCATGAAGCCT TERM 903 1132368 - 1132351 - T 100 -12.7 -4.61482 | opp_overlap 1132351, overlap 1132348 GCGCTGAAAAAACAA GGGAGGC CGGT GCCTCCC TTTTGCATGAAGCCT Daci_1017 1133240 - 1132401 - | pyrroline-5-carboxylate reductase Daci_1018 1134064 - 1133273 - | hypothetical protein Daci_1019 1135096 - 1134104 - | hypothetical protein Daci_1020 1136858 - 1135161 - | thiamine pyrophosphate binding domain-containing protein Daci_1021 1136955 - 1137650 + | GntR family transcriptional regulator Daci_1022 1138863 - 1137658 - | hypothetical protein Daci_1023 1140328 - 1138832 - | glycerol kinase Daci_1024 1141166 - 1140402 - | DeoR family transcriptional regulator TERM 904 1141303 - 1141283 - H 72 -2.5 -4.82661 | opp_overlap 1141286, overlap 1141286 ACGAAGAAAAAAGAA CAGCACCTA GGG TATGTGTTG ATGGGCTGCGATCTG TERM 905 1141755 - 1141718 - g 70 -12.7 -3.28924 | gap 1 CACGGTGGCGGACAA CATCGC-CTCGCCGCTCA AGC TGCGCGGCGACCGCGACG TGGCGCAGCGCGTGC Daci_1025 1141353 - 1142516 + | ABC transporter related TERM 906 1143159 - 1143196 + G 75 -9.9 -4.07568 | gap 2 CGTTGTGGTCATGAC GCGTGGGCGCGCCGTGC AGGTGG GCACGCC-CGCCCA-GC TTTTCGAGCGGCCCA Daci_1026 1142518 - 1143600 + | ABC transporter related TERM 907 1144362 - 1144352 - g 75 -8.2 -4.1899 | opp_overlap 1144353, overlap 1144353 GTACCTCACGCAAAA GGCC GTG GGCC AGTTCGATCTCGGGC Daci_1027 1143597 - 1144490 + | binding-protein-dependent transport systems inner membrane component Daci_1028 1144566 - 1145381 + | binding-protein-dependent transport systems inner membrane component Daci_1029 1145542 - 1145850 + | putative integral membrane protein Daci_1030 1145951 - 1147684 + | extracellular solute-binding protein TERM 908 1147714 - 1147669 - f 76 -5.9 -4.58283 | opp_overlap 1147668, overlap 1147670 CAATGCCTGGAAAAA CGGCAAGGTGCGTTAGCACCC CCTG AGGCGCTTGCGCGCCTTCCCC CTCTCTACTTGCTTC Daci_1031 1148029 - 1149618 + | FAD dependent oxidoreductase TERM 909 1149641 - 1149671 + F 100 -24.2 -4.07885 | opp_overlap 1149647, overlap 1149647 TGAAGTCCCTCTCAA GCAAAACGCCCTGC ACT GCAGGGCGTTTTGC TTTTGGAGGCAGATA TERM 910 1149665 - 1149647 - f 100 -16 -4.4078 | opp_overlap 1149641 1149647 CCCTCTCAAGCAAAA CGCCCTGC ACT GCAGGGCG TTTTGCTTTTGGAGG TERM 911 1149647 - 1149665 + F 100 -16 -4.67038 | opp_overlap 1149647, overlap 1149641 CCCTCTCAAGCAAAA CGCCCTGC ACT GCAGGGCG TTTTGCTTTTGGAGG TERM 912 1149790 - 1149751 - f 79 -8.6 -4.45544 | gap 1, opp_overlap 1149754, overlap 1149786 TTTTATGAATCAAAA TGCTGCTCA-TGGCATCTC GTA GCGGTGCCAGCGAACAGCA GCCAGCACAAGGCTG TERM 913 1149973 - 1149993 + F 100 -14 -5.25803 | AGTCTGCCACCCTTT GCCGAGCC CGCCA GGCTCGGC TTTTTTATGGGCGTT TERM 914 1150242 - 1150276 + F 70 -10.7 -3.44848 | gap 1, overlap 1150240 AAGACTGACTGGCTG CTCG-CGGCCCTTGAG AAGA CTCTGGGGCTGTCGAG TGTTTGCTGGAGCAA Daci_1032 1150307 - 1150675 + | ribosomal protein L14 Daci_1033 1150686 - 1151006 + | ribosomal protein L24 Daci_1034 1151017 - 1151556 + | 50S ribosomal protein L5 TERM 915 1151680 - 1151653 - g 72 -14.2 -3.21705 | gap 1, overlap 1151648 1151669 CAGAACTGAAGGCAA TCGCCGCTGACGC AAA GCG-CAGCGACGA AGAGCGCGACGCCGC Daci_1035 1151565 - 1151870 + | ribosomal protein S14 TERM 916 1151960 - 1151946 - g 72 -8.6 -3.97368 | TCCGCAATGCACAAA TGGTCT CCA AGACCA CCGTGACGGCTCCTT Daci_1036 1151891 - 1152286 + | ribosomal protein S8 Daci_1037 1152311 - 1152844 + | ribosomal protein L6 Daci_1038 1152856 - 1153221 + | ribosomal protein L18P/L5E TERM 917 1153318 - 1153298 - g 90 -7.6 -5.00616 | gap 1, overlap 1153302 GTCTGCGCGAAAAAA TGATCGCGG TGAA CCGCG-TCA CCAAGGTTGTGAAGG TERM 918 1153578 - 1153594 + G 75 -9.3 -4.12188 | CGGCATCATCGCCGG CGGCCCG ATG CGCGCCG TTTTCGAAGTGCTGG Daci_1039 1153237 - 1153758 + | 30S ribosomal protein S5 Daci_1040 1153773 - 1153955 + | ribosomal protein L30 Daci_1041 1153967 - 1154398 + | ribosomal protein L15 TERM 919 1154466 - 1154454 - g 77 -3.3 -4.70879 | opp_overlap 1154464, overlap 1154462 1154463 CTCAAATTGCAAAAA CCGGA AAA TTCGG CGATCTTCGCCGCCG Daci_1042 1154423 - 1155742 + | preprotein translocase subunit SecY Daci_1044 1156011 - 1156376 + | 30S ribosomal protein S13 Daci_1045 1156395 - 1156799 + | 30S ribosomal protein S11 Daci_1046 1156890 - 1157513 + | 30S ribosomal protein S4 TERM 920 1157545 - 1157571 + F 77 -14.5 -2.71263 | gap 1, opp_overlap 1157541 1157540 TTCTGTAAAACCGTC CCCCAGCCGCGA GGCA TCGCG-CTGGGG TGCTTCACCAGCCTT Daci_1047 1157626 - 1158624 + | DNA-directed RNA polymerase subunit alpha Daci_1048 1158811 - 1159203 + | ribosomal protein L17 TERM 921 1159311 - 1159334 + T 100 -16.8 -5.15634 | opp_overlap 1159311 CAACCAAATTGAAAA GGGCTACGAC AACT GTCGTAGCCC TTTTTTCATGCCCTC TERM 922 1159334 - 1159311 - T 100 -16.8 -4.39318 | opp_overlap 1159311 CAACCAAATTGAAAA GGGCTACGAC AACT GTCGTAGCCC TTTTTTCATGCCCTC Daci_1049 1159701 - 1159384 - | hypothetical protein TERM 923 1159694 - 1159707 + g 76 -2.3 -4.76171 | GGCAAGAATCGGTTG GCTGG CATG TCGGC TTTTCTCCTTTTTTC Daci_1050 1159996 - 1161501 + | anion transporter Daci_1051 1162101 - 1161514 - | uncharacterized peroxidase-related enzyme Daci_1052 1162793 - 1162098 - | hypothetical protein Daci_1053 1163920 - 1162790 - | luciferase family protein TERM 924 1163617 - 1163627 + g 72 -8.2 -4.07568 | overlap 1163616 CCGCGTCCTCGGCCA CGCG CAG CGCG TTTTCCAGCGGCAGC TERM 925 1163710 - 1163730 + g 82 -14 -3.73953 | opp_overlap 1163709 1163705 1163704 1163702 CCAGAAAGACGAAGG GCGAGGGC AGGCC GCCCTCGC TTTCATGGAAATGGT Daci_1054 1165592 - 1163901 - | ABC transporter related TERM 926 1165383 - 1165370 - G 75 -9.5 -4.07568 | opp_overlap 1165373 1165376 CGTTGTCGGCCAAAA GGCCG ATCA CGGCC TGGGCCGTGGTGGTC Daci_1055 1166545 - 1165589 - | binding-protein-dependent transport systems inner membrane component TERM 927 1165774 - 1165764 - G 70 -3.2 -4.4009 | CCGTAGCCCAGAAAA CCCA GCG TGGA AATCGCAAGGATCGC TERM 928 1166237 - 1166291 + g 73 -12.8 -3.40403 | gap 3 CGCGTCCGTGCCCAG CCAGTGCGCGGCGCCGGG-C-GCCAGC AGCT GCTGGCCGGCCTGGC-CCGCGATCGGG TTCTGGTGGGCGAAC Daci_1056 1167489 - 1166542 - | binding-protein-dependent transport systems inner membrane component Daci_1057 1169191 - 1167518 - | extracellular solute-binding protein TERM 929 1169532 - 1169476 - g 79 -11.5 -4.08394 | gap 3, overlap 1169465 ATACCTCGCCGAAAA GCGTGCC--GCCGTGCTCGCCCGCAGCG CCGC CGTCGCGGCCG-GCACGGCCCAGCCCGC CCACCTCAAGGCCCA Daci_1058 1169393 - 1169995 + | OsmC family protein Daci_1059 1170021 - 1170845 + | hypothetical protein TERM 930 1170888 - 1170905 + G 82 -9.1 -4.4078 | overlap 1170889 CCCCGCTGACACCCA TGCCCAC CCCG GTGGGCG TTTTCGTTGCAGCCG Daci_1060 1170887 - 1172218 + | molecular chaperone, HSP70 class Daci_1061 1173285 - 1172344 - | uroporphyrin-III C/tetrapyrrole methyltransferase TERM 931 1172916 - 1172896 - Gf 76 -14.7 -2.53876 | GGGCAGCGGAATGCA GCGCAGGCC CGC GGCCTGCAC GGCTGCGCACAGGCG TERM 932 1173342 - 1173305 - g 72 -4.1 -4.56597 | gap 3 TTTCCTTGCGAAAAA GCCGGCAGGCGCG-GGGC CGTCT GCCCTCACGAC--CCGGC ATCGGGGCCAGCAGG Daci_1062 1173285 - 1173701 + | hypothetical protein Daci_1063 1173775 - 1174383 + | phosphoheptose isomerase Daci_1064 1174380 - 1175111 + | transport-associated protein TERM 933 1175151 - 1175134 - T 95 -11.3 -4.54727 | opp_overlap 1175134, overlap 1175129 CGCCTGAAAGCAAAA GCCGGAA CATG TTCCGGC TTTTTGTTTTGGGCA TERM 934 1175134 - 1175151 + T 100 -11.3 -5.45802 | opp_overlap 1175134 1175129 CGCCTGAAAGCAAAA GCCGGAA CATG TTCCGGC TTTTTGTTTTGGGCA Daci_1065 1176222 - 1175311 - | 3-hydroxyisobutyrate dehydrogenase TERM 935 1176365 - 1176414 + r 78 -13.6 -3.25823 | gap 2, opp_overlap 1176356 1176365 1176364 AGACGATGGCGAAAT GCTCGGT-GCCCGC-CGCCAGGTC CAGC GACTTGGCGCGCTGGCTGCCCAGC TTGATCTGCAGCCGC Daci_1066 1177484 - 1176348 - | twitching motility protein TERM 936 1176525 - 1176538 + g 76 -3.1 -4.74215 | gap 1 GTCGAAGGTCTGCAT GCC-CA GGT TGCGGC TTTTCTTCATGATCT Daci_1067 1178238 - 1177606 - | cyclic nucleotide-binding protein TERM 937 1177839 - 1177786 - G 73 -7.1 -4.11216 | gap 1, overlap 1177787 GGTGCAGCTGGAAAA GCGCGGCCCGCCGTCCAGCAGGGACA TCT CGCCCAGGATGT-CGCCGGGCCGCGT CTGCGCCAGGCGCAT Daci_1068 1179313 - 1178270 - | twitching motility protein TERM 938 1179583 - 1179547 - g 72 -13.5 -3.21395 | overlap 1179545 AGGGCGTGGACAAGA TCGCCGCCGTGCGCGCC ATG GGCCTGCCGGGCGGCGA GACCCTGCAATGGCA Daci_1069 1179351 - 1180076 + | alanine racemase domain-containing protein TERM 939 1180087 - 1180061 - T 100 -19.5 -4.03234 | CTTCGGCCAGAGAAA CTACGCCCCGC GCTGA GCGGGGCGTAG CTGGCCTGACTGGCG Daci_1070 1181398 - 1180115 - | extracellular ligand-binding receptor Daci_1071 1182147 - 1181425 - | TetR family transcriptional regulator TERM 940 1181454 - 1181476 + g 75 -5.4 -4.56775 | overlap 1181438 1181456 GCGGCTCGGCGCGGG GCCGGCTGCG CCG TGCAGGCGTC TTTTTCGCGGGGGAT TERM 941 1181679 - 1181694 + g 71 -11.8 -3.61398 | opp_overlap 1181676 1181672 CGCGGAAATCCAGAT GGCCGC TGGC GCGGCC TTCTTCGAGCAGCGC TERM 942 1183699 - 1183737 + G 80 -16 -3.21099 | gap 1, opp_overlap 1183671 CAGGCCGCCGTGATC GGCGTGCCCGACC-CGC ACAGGG GCGAGGTCGTGCGCGCC TTCATCGTCACGCGG Daci_1072 1182307 - 1183905 + | AMP-dependent synthetase and ligase TERM 943 1185358 - 1185318 - g 72 -13.9 -3.16564 | overlap 1185344 CGCGCACTGGACGAA TGCCGCATCGACGGGCTGG CCA CCAACCTGCCGCTGCTGCA GGCGCTGGCCCGGCG Daci_1073 1184052 - 1187345 + | carbamoyl-phosphate synthase L chain ATP-binding TERM 944 1188542 - 1188514 - g 71 -2.5 -4.56597 | overlap 1188522 1188523 TTCGGCCTGGAAAAA TGGCACAAC-GTG GACCG CACCGTCG-GCCA CATCGCCAAGGCCCT Daci_1074 1187446 - 1188588 + | aminotransferase class V Daci_1075 1188622 - 1189041 + | peptidylprolyl isomerase TERM 945 1189072 - 1189038 - f 74 -12.7 -3.14211 | opp_overlap 1189038 1189044, overlap 1189042 ACTGCTGGGCATCAA GTGATGGCCGGCCCG CTGGC CGGGCCAGCCCCCGC TTGATGCAAAGCCGG TERM 946 1189044 - 1189100 + F 100 -16.2 -5.07053 | opp_overlap 1189042 1189038 1189083, overlap 1189038 1189073 GGGCATCAAGTGATG GCCGGCCCGCTGGCCGGGCCAGCCCC CGCTT GATGCAAAGCCGGCCTGCGGGCCGGC TTTTTTACGGTCGTT TERM 947 1189100 - 1189083 - f 88 -14.1 -3.64703 | opp_overlap 1189044 1189073 CCCGCTTGATGCAAA GCCGGCC TGCG GGCCGGC TTTTTTACGGTCGTT Daci_1076 1189130 - 1190044 + | hypothetical protein Daci_1077 1191235 - 1190054 - | filamentation induced by cAMP protein Fic TERM 948 1190756 - 1190775 + g 72 -6.3 -4.25104 | AATCCAGTTCTGCGA GCGCCGG AACTCG CCGGGGC TTTTGGTGCCGCCGC TERM 949 1191085 - 1191101 + g 75 -10.1 -4.07568 | GCCGTCCCAGCGCAC GCTCGGC AAG GCTGAGC TTTTCCAGGAGCGCG Daci_1078 1192931 - 1191360 - | anaerobic nitric oxide reductase transcription regulator Daci_1079 1193052 - 1194278 + | nitric oxide dioxygenase Daci_1080 1196268 - 1194358 - | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) Daci_1081 1196312 - 1197235 + | formyltetrahydrofolate deformylase Daci_1082 1197255 - 1198178 + | LysR family transcriptional regulator TERM 950 1198566 - 1198602 + G 74 -14.4 -3.29511 | gap 1 AGCCTGCCACGCCAT CCAGGTGCCCGTGATCG CGCG CGG-CGCGGGCACCGGG TTGTCGGGCGGTGCC Daci_1083 1198279 - 1199832 + | FAD linked oxidase domain-containing protein Daci_1084 1200931 - 1199909 - | hypothetical protein TERM 951 1201021 - 1200991 - H 93 -8.4 -4.90869 | ACTATCAATCAAAAA GAGATGTGATTTTT ATC AATACTCACATCTC AATCAGACCAATCCC Daci_1085 1201095 - 1201472 + | hypothetical protein Daci_1086 1201885 - 1201535 - | hypothetical protein TERM 952 1202074 - 1202054 - R 100 -14 -6.09133 | opp_overlap 1202054 CATCCCAAAAAAAAA GGCCACGG GCATT CCGTGGCC TTCGTGGAGCGGCTT TERM 953 1202054 - 1202074 + r 82 -14.7 -3.14463 | opp_overlap 1202054 CATCCCAAAAAAAAA GGCCACGGG CAT TCCGTGGCC TTCGTGGAGCGGCTT Daci_1087 1205280 - 1202095 - | CzcA family heavy metal efflux protein Daci_1088 1206671 - 1205292 - | RND family efflux transporter MFP subunit TERM 954 1206373 - 1206392 + g 86 -10 -4.62471 | gap 1 TTGGCGGCAGGTTGG GCCGCAGGC TTG GCCT-CGGC TTTTTCCGCCTTGGA Daci_1089 1208036 - 1206702 - | outer membrane efflux protein TERM 955 1207901 - 1207879 - G 70 -12.7 -3.36515 | overlap 1207877 GTGGACTCGGAAACA GCGGCTGCA GATGG CGCAGCCGC ATCGGCAGGCTCGCC Daci_1090 1208620 - 1208204 - | hypothetical protein Daci_1091 1208765 - 1209463 + | two component heavy metal response transcriptional regulator Daci_1092 1209460 - 1210854 + | heavy metal sensor signal transduction histidine kinase TERM 956 1211217 - 1211195 - g 78 -9.8 -4.19238 | overlap 1211196 CCTGGAACCCGAAAA CGGCCGCC TGGCCAT GACGGCCG CCAGCTGCCACATGT Daci_1093 1210890 - 1211318 + | hypothetical protein Daci_1094 1211763 - 1211326 - | thioesterase superfamily protein Daci_1095 1211984 - 1211760 - | biotin/lipoyl attachment domain-containing protein Daci_1096 1213357 - 1211996 - | carbamoyl-phosphate synthase L chain ATP-binding Daci_1097 1215462 - 1213354 - | CoA-binding domain-containing protein TERM 957 1213844 - 1213808 - G 70 -9.3 -3.85817 | opp_overlap 1213808, overlap 1213811 AGCGTGGCCGAGAAA TCACCGAAGGCCGCCAG CGC CTGGCCGGCTTCGCGGA TGTTCAGCCGCACCA TERM 958 1214698 - 1214641 - G 85 -18.1 -3.14132 | GTGCTGGCGCAGGAA GGCATCGGCCAGCGCGTCCTCGGCCGC CAGC GCGCCCGTGTGCGAGCTGGCCGTGGCC TGGCCTGCGCGCGTG TERM 959 1215109 - 1215078 - G 78 -15.8 -3.02043 | gap 1 AATTGGGGCCGAACA GGCGCAGCCCGCCGC CTG GCGACCGGC-GCGCC CGCGCCACCAGGTCG Daci_1098 1216492 - 1215473 - | hypothetical protein Daci_1099 1218069 - 1216522 - | propionyl-CoA carboxylase TERM 960 1218695 - 1218673 - g 72 -14.2 -3.21099 | GTGGCCGACCATGAA GGGCTGATGC GCT ACATCAGCCC CGTGCACGAGAAGTT TERM 961 1219540 - 1219584 + G 93 -17.8 -3.56568 | overlap 1219573 GTGCTGCATGTGCCC GCCCTGCGCCAGCGCCTGGA GGACA TCCCGGCCCTGGTGCAGCGC TTTGCCCAGTCGTTC Daci_1100 1218214 - 1219974 + | putative sigma54 specific transcriptional regulator Daci_1101 1220102 - 1221073 + | bile acid:sodium symporter Daci_1102 1222402 - 1221074 - | hypothetical protein Daci_1103 1222500 - 1222757 + | hypothetical protein Daci_1104 1223684 - 1222809 - | hypothetical protein TERM 962 1223005 - 1223044 + g 74 -14.8 -3.02144 | CTGGGAATGCCCACG CCGCGCAGCACGTGGCCG CGCC CGGCCACCAGCAGCACGG TCTTGCCGGGCCTGA Daci_1105 1223846 - 1225744 + | GAF sensor signal transduction histidine kinase Daci_1106 1225773 - 1226444 + | two component LuxR family transcriptional regulator Daci_1107 1226870 - 1228192 + | major facilitator transporter Daci_1108 1228209 - 1229669 + | nitrite transporter TERM 963 1231333 - 1231311 - g 72 -6.3 -4.25104 | gap 1 GGCCTGGCAGGAAAA GATCAC-CGG CGTG CCGCGTGACC AGGTGATCGCCATTG Daci_1109 1229737 - 1233576 + | nitrate reductase, alpha subunit TERM 964 1233736 - 1233725 - f 76 -5.8 -4.63486 | ACCCCTCGAAGAAAA CGTG CACA CACG TTGAAAGGACAAACA TERM 965 1234135 - 1234107 - g 74 -12.3 -3.54408 | opp_overlap 1234119, overlap 1234103 GGCCAGGGAAAGCAA GGCCGCGCCCACG GCG CGCGCACGCAGCC TGATCTCGGGCCAGC Daci_1110 1233754 - 1235295 + | nitrate reductase, beta subunit Daci_1111 1235307 - 1236020 + | nitrate reductase molybdenum cofactor assembly chaperone Daci_1112 1236017 - 1236754 + | respiratory nitrate reductase, gamma subunit TERM 966 1236982 - 1236929 - g 74 -11.5 -3.71848 | gap 1, overlap 1236931 1236932 GGCCCGCATCAACAA CAC-GCCGCTGCACGCACCCGGACAG CGC CCGCCCGAGCGCGAACTGCGCCAGCG CGCCTGCACCGAGCT TERM 967 1236979 - 1236931 - g 73 -12.9 -3.44284 | overlap 1236929 1236932 CCCGCATCAACAACA CGCCGCTGCACGCACCCGGACAG CGC CCGCCCGAGCGCGAACTGCGCCA GCGCGCCTGCACCGA Daci_1113 1236765 - 1237667 + | PpiC-type peptidyl-prolyl cis-trans isomerase Daci_1114 1237676 - 1238368 + | carbonate dehydratase TERM 968 1238454 - 1238438 - g 73 -7.9 -4.1196 | AATGCATCGCGAAAA CCTGGGC CGC GCGCAGG ACGCGGCGGATCTGC TERM 969 1240326 - 1240309 - g 72 -9.1 -4.04206 | gap 1 GCACCGTGATAGAAA GC-CGCCC GCA GGGCGCGC TGGACGCCGTGGCCG TERM 970 1240742 - 1240684 - g 77 -15.2 -3.21395 | gap 2, overlap 1240682 1240685 ATGCGGTGCAGAACA TTCTGGCCCG-GC-GCGGCAGCGGCGCG CCGCC CGCGCCATCGCCGCTGCCCGAGCCCGAG GCCCTGGCCACCGAC TERM 971 1240741 - 1240685 - g 79 -18.7 -2.52623 | gap 2, overlap 1240682 1240684 TGCGGTGCAGAACAT TCTGGCCCG-GC-GCGGCAGCGGCGCG CCGCC CGCGCCATCGCCGCTGCCCGAGCCCGA GGCCCTGGCCACCGA Daci_1115 1238346 - 1240868 + | ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent TERM 972 1240929 - 1240871 - g 73 -12.4 -3.53224 | gap 3, overlap 1240872 GAGCTGTGGGTGAAA GTTGCCGTGGCCCCGCGCCCGCAGGGC GATGCCGT GCCCGGCTGGCGCGCG-CC-CGGCA-C GGGCTTCGACCAGCC Daci_1116 1240865 - 1241443 + | hemerythrin HHE cation binding domain-containing protein Daci_1117 1241515 - 1242609 + | membrane protein AbrB duplication Daci_1118 1243184 - 1242618 - | GlpP family transcriptional regulator Daci_1119 1244736 - 1243186 - | FAD linked oxidase domain-containing protein Daci_1120 1246412 - 1244730 - | FAD dependent oxidoreductase TERM 973 1245166 - 1245176 + g 71 -2.4 -4.57073 | overlap 1245164 GTGCAGCGCGTGCGC CGGC CCA GCAG TTTTTCCACGGCGTC TERM 974 1246429 - 1246462 + r 82 -14.6 -3.14132 | CGCAGCCCTCCAGGG C-GGCGCTGCGCCCGG GGGC CCGGGCGCGG-GCCAG TTCGTCGCCCACGCG Daci_1121 1247950 - 1246409 - | carbohydrate kinase FGGY Daci_1122 1249412 - 1247964 - | major facilitator transporter TERM 975 1249485 - 1249467 - R 72 -11.8 -3.3095 | opp_overlap 1249469 ACACAGGCGTGACAA GACCATCT CAC AGATGGTC TTCAAATCTTGAACC TERM 976 1249612 - 1249586 - R 100 -18 -5.27335 | GCGCCCAAAGAAAAA GCCCGCCGCAGA GAG TCTGCTGCGGGC TTGGCACGCGGCCCC TERM 977 1249616 - 1249644 + r 83 -15.9 -2.98223 | TCTGCTGCGGGCTTG GCACGCGGCCCCT TCA GGGGGCCGTGCGC TGTGTGCTGTCAGTG Daci_1123 1249947 - 1249654 - | hypothetical protein Daci_1124 1251349 - 1250153 - | hypothetical protein TERM 978 1250902 - 1250952 + g 83 -14.5 -3.61178 | gap 1, overlap 1250904 GTTCGGGCTTGGGAG CGGGCGGCGCCGGCGGCGTGGCCG GGGT TGGCC-CGCTGCCGGCAGCGGCAG TTTCCGATGCGTCCG TERM 979 1250904 - 1250951 + g 70 -15.5 -2.76492 | overlap 1250902 TCGGGCTTGGGAGCG GGCGGC-GCCGGCGGCGTGGCCG GGGT TGGCC-CGCTGCCGGCAGCGGCA GTTTCCGATGCGTCC Daci_1125 1252257 - 1251478 - | IclR family transcriptional regulator Daci_1126 1252384 - 1253406 + | fumarylacetoacetate (FAA) hydrolase Daci_1127 1253403 - 1254416 + | GumN family protein Daci_1128 1254498 - 1255472 + | hypothetical protein Daci_1129 1257397 - 1255637 - | hypothetical protein TERM 980 1255709 - 1255678 - G 73 -7 -4.17048 | overlap 1255679 TGGTGGTGAAAAGAA CGGCCAGGCTGGCG GCGG CGCCGGCCACGCCC AGGGCGGCGAAGAGG TERM 981 1256529 - 1256501 - G 86 -9.5 -4.60487 | gap 1, overlap 1256473 CACCATCTGCAAAAA CGC-GCAGGCGC CACGGC GCGCCAGCAGCG GGCCGTCCAGCGCGG TERM 982 1256724 - 1256776 + g 88 -14.9 -3.71848 | gap 1, overlap 1256718 TCCTCGCGCAGCGCC TGGCC-CAGCTGGCGCGTGACTTC GCGCGG GCGGTAGCGTGCCAGCTGCGGCCA TTGTTCCTGGGCCAG Daci_1130 1259671 - 1257488 - | molybdopterin oxidoreductase TERM 983 1259646 - 1259690 + g 76 -7.7 -4.30719 | opp_overlap 1259636, overlap 1259638 1259636 GAAAAGGCCGTCACG GGCAAGGGGCGGTGCCGGTCT TGC ATGCCGCAATCGCCGCTTGTC TTTATTATGCGGACC Daci_1131 1259765 - 1260922 + | extracellular ligand-binding receptor TERM 984 1261296 - 1261250 - g 72 -4.3 -4.58395 | gap 2, overlap 1261251 GCCACGCCGGAAAAA TGCATGCCTGCGGACATGACGGC CAT GTCGCCATG-CTGCTGGC-TGCC GCGCAGTACCTGGCC TERM 985 1261510 - 1261464 - g 72 -13.7 -3.14132 | overlap 1261450 1261449 CTGGCCGGGCATGAA GGCCGG-CACCATGGCCGTGGGC CCG GGCC-CGGCCATGGCGTCCAGCA ACGAATTCCGCATCG Daci_1132 1260949 - 1262157 + | amidohydrolase TERM 986 1262795 - 1262817 + G 79 -14.8 -3.29829 | opp_overlap 1262794 1262793 CTGTGCGAGGAAATT CCCCGGCTGC TGC GCAGCCTGGG TTGTACGGCCGTCTA Daci_1133 1262219 - 1262998 + | ABC transporter related Daci_1134 1263114 - 1263368 + | acyl-CoA-binding protein TERM 987 1263395 - 1263425 + T 100 -16.8 -3.53012 | opp_overlap 1263396 1263398 1263401, overlap 1263396 ACCGATCGCAGACAC AGACAAGGCCCCGG ACT CCGGGGCCTTGCCG TTTCCGGCCAGGCCA TERM 988 1263424 - 1263396 - T 100 -22.5 -3.00022 | opp_overlap 1263395 1263396, overlap 1263398 1263401 CCGATCGCAGACACA GACAAGGCCCCGG ACT CCGGGGCCTTGCC GTTTCCGGCCAGGCC TERM 989 1263396 - 1263424 + T 95 -20.3 -2.71712 | opp_overlap 1263396 1263398 1263401, overlap 1263395 CCGATCGCAGACACA GACAAGGCCCCGG ACT CCGGGGCCTTGCC GTTTCCGGCCAGGCC TERM 990 1263422 - 1263398 - T 100 -21.5 -3.05498 | opp_overlap 1263396 1263395, overlap 1263396 1263401 GATCGCAGACACAGA CAAGGCCCCGG ACT CCGGGGCCTTG CCGTTTCCGGCCAGG TERM 991 1263419 - 1263401 - T 100 -17.4 -3.66896 | opp_overlap 1263396 1263395, overlap 1263398 1263396 CGCAGACACAGACAA GGCCCCGG ACT CCGGGGCC TTGCCGTTTCCGGCC TERM 992 1263544 - 1263509 - T 78 -13.2 -3.14051 | gap 1, overlap 1263507 GGACGCCGAGCAAGA GCCGCCTCGCGGCGGGG GCG CCCAGCCG-AAGGCGTC GTCCCCCTCCGCGAA Daci_1135 1264618 - 1263596 - | 2OG-Fe(II) oxygenase TERM 993 1265002 - 1264959 - H 80 -10.8 -4.07568 | gap 1, opp_overlap 1264998, overlap 1264960 1264991 CCGCCGCGTCGAAAA CCGGTGCGGCCCAGCC-CAGT GAC ACCGAGGAAGGGCCGCCCCGC ACCGAGGGTGTCGTC TERM 994 1265001 - 1264960 - H 80 -14.3 -3.04398 | gap 1, opp_overlap 1264998, overlap 1264959 1264991 CGCCGCGTCGAAAAC CGGTGCGGCCCAGCC-CAGT GAC ACCGAGGAAGGGCCGCCCCG CACCGAGGGTGTCGT TERM 995 1265675 - 1265632 - g 74 -11.7 -3.68222 | gap 3, overlap 1265633 CCTCAAGGGCAAGAA GGTGGCC-GCCGCCGC-CGTGG AGT CCACGCGCCGCGTCTGGCC-CC TGGTCGCGCAGCGCC Daci_1136 1265189 - 1266244 + | NMT1/THI5-like domain-containing protein Daci_1137 1266255 - 1266770 + | CMP/dCMP deaminase zinc-binding Daci_1138 1266826 - 1267863 + | NMT1/THI5-like domain-containing protein Daci_1139 1267932 - 1268774 + | ABC transporter related Daci_1140 1268791 - 1269558 + | binding-protein-dependent transport systems inner membrane component TERM 996 1269679 - 1269635 - g 77 -15.7 -3.1552 | opp_overlap 1269668, overlap 1269633 CCTGACCGACGAACA GGCCGCCCG-CCAGCTGCGCC GCGCA GGCGCCG-TGGCCGGGCGGGC CATGGCCATGGGTCG Daci_1141 1269573 - 1270097 + | CMP/dCMP deaminase zinc-binding Daci_1142 1271873 - 1270122 - | sulfatase TERM 997 1270796 - 1270836 + g 70 -12.5 -3.29144 | opp_overlap 1270823, overlap 1270751 1270797 CGCACACGCCCTTGC AGCCGGCCTGGTTGTCC ACCCACA GCACGGCCAGGCCGGCG TTGTACAGCACGTCC TERM 998 1270797 - 1270835 + g 73 -16 -2.57344 | opp_overlap 1270823, overlap 1270751 1270796 GCACACGCCCTTGCA GCCGGCCTGGTTGTCC ACCCACA GCACGGCCAGGCCGGC GTTGTACAGCACGTC TERM 999 1272377 - 1272330 - g 77 -14.7 -3.15861 | gap 1 TACGACCCCGAGGAA CTGCTGGCCCGCCTGCGCGCCG TGAGC CGGCGCGGCGGCG-GCATGCAG GCCGGGCAGGACGCG Daci_1143 1272009 - 1272683 + | two component transcriptional regulator TERM 1000 1272727 - 1272699 - g 74 -13.7 -3.28712 | GGGGCGCCGGGAGAA GCCCGGCCTGCCG CCC CGGCTGGCCGACC AGCTGGCCCGCGACC TERM 1001 1273593 - 1273549 - g 78 -6.2 -4.66609 | gap 1 CAGCGCACGGAAAAA CTGCTGCAGCTGTCGCGCGCG GCCT CGGGCTCGGC-GCTGGCGCAG GACGAGGTGCGGCTG Daci_1144 1272676 - 1274103 + | histidine kinase Daci_1145 1275383 - 1274055 - | putative zinc protease protein Daci_1146 1275472 - 1275957 + | hypothetical protein Daci_1147 1275983 - 1277311 + | cyclopropane-fatty-acyl-phospholipid synthase Daci_1148 1277345 - 1277674 + | hypothetical protein Daci_1149 1278779 - 1277697 - | aldo/keto reductase TERM 1002 1279504 - 1279556 + G 88 -15.7 -3.72576 | gap 3, opp_overlap 1279499, overlap 1279507 1279543 GAGACCAATACCCTG TCCGCGCAGC-TGGCCGCGGCCCAGG CGGG CCTGGGCC-TGGCCGTGCTGC-CGCA TTTCCTGGCGCGGCA TERM 1003 1279507 - 1279555 + G 82 -18.3 -2.83403 | gap 3, opp_overlap 1279499, overlap 1279504 1279543 ACCAATACCCTGTCC GCG-CAGC-TGGCCGCGGCCCAGG CGGG CCTGGGCC-TGGCCGTGCTGCCGC ATTTCCTGGCGCGGC Daci_1150 1278829 - 1279731 + | LysR family transcriptional regulator Daci_1151 1279796 - 1280311 + | hypothetical protein TERM 1004 1280346 - 1280377 + T 77 -14.4 -2.70932 | opp_overlap 1280353, overlap 1280353 CGCGGCTCCCGCCAA CGAAAAAGCCCGGC CGAA GCCGGGCTTGATCG TGGTTGCAACCGGGC TERM 1005 1280353 - 1280370 + T 78 -14.1 -3.25015 | opp_overlap 1280353, overlap 1280346 CCCGCCAACGAAAAA GCCCGGC CGAA GCCGGGC TTGATCGTGGTTGCA TERM 1006 1280370 - 1280353 - T 100 -14.1 -4.8622 | opp_overlap 1280353 1280346 CCCGCCAACGAAAAA GCCCGGC CGAA GCCGGGC TTGATCGTGGTTGCA Daci_1152 1281409 - 1280420 - | hypothetical protein TERM 1007 1281178 - 1281206 + g 70 -13.1 -3.28924 | overlap 1281179 GCGCGGCCTTGGCCG TGCCGATGGTGCT GCC GGCGCCGTCGGCG TTGTCCACCACGATG Daci_1153 1282898 - 1281651 - | putative phenylacetate-CoA ligase Daci_1154 1283797 - 1282952 - | ABC transporter related TERM 1008 1283067 - 1283097 + g 88 -14.6 -3.70149 | TTGCTGGCCAGGTCC GAGGCCGCGCCGTC CAT GACGATGCGGCCGC TTTCCATGATGTAGC Daci_1155 1285275 - 1283959 - | hypothetical protein Daci_1156 1286419 - 1285355 - | inner-membrane translocator Daci_1157 1287370 - 1286441 - | inner-membrane translocator Daci_1158 1288313 - 1287528 - | ABC transporter related TERM 1009 1287785 - 1287819 + g 72 -8.5 -4.08216 | overlap 1287787 GCAGCAGCACCTGCG GCTGCATGG-CCAGGGC GCG GCCCAGGTCCACGC-GC TTTTGCAGGCCGTAG TERM 1010 1288333 - 1288359 + r 75 -7.8 -4.14739 | GCGGCTCCGGTCAGG CCCTGGCGGTGG CGG CCACCGAATGGG TTTTGGCATCGATGA Daci_1159 1290265 - 1288328 - | AMP-dependent synthetase and ligase TERM 1011 1289575 - 1289558 - G 72 -5.5 -4.4078 | overlap 1289560 CTGCGCGAAGGAAAA CAGGTGG TCGC CCACCCA GGCCGGGGGCAGGTA TERM 1012 1290725 - 1290698 - g 70 -12 -3.30159 | gap 1, opp_overlap 1290698 1290703, overlap 1290699 CGAACGGGCCCAGAA GGCGCTGGTCGTC GGC GACGCCCAGC-CC GGCGACTATGTCTGC Daci_1160 1290585 - 1291313 + | Crp/FNR family transcriptional regulator TERM 1013 1291419 - 1291403 - f 71 -7.3 -4.27686 | opp_overlap 1291403 1291418, overlap 1291414 GAAAAGTACTGAAAA TCGTAGC CAA ACTACGA TTGGTAGAAAAATAC Daci_1161 1291475 - 1292212 + | hypothetical protein Daci_1162 1292209 - 1293123 + | hypothetical protein Daci_1163 1294350 - 1293142 - | L-carnitine dehydratase/bile acid-inducible protein F Daci_1164 1295348 - 1294350 - | hypothetical protein Daci_1165 1296532 - 1295363 - | acyl-CoA dehydrogenase domain-containing protein TERM 1014 1296184 - 1296197 + g 73 -8.1 -4.11692 | opp_overlap 1296156, overlap 1296161 CGCGCGCCATGCGCG GCAGC CAGC GCTGC TTTTGCGCCTCGGTG TERM 1015 1296564 - 1296602 + H 70 -9.9 -3.54741 | opp_overlap 1296575 1296591 1296592 1296595, overlap 1296565 AGCGCGGGCACCAGG GCTGCAA-TGCAGTTTCAA ATA TTGAAA-TGCAGTTGCGGC TTTGCGGCCGTGGTC Daci_1166 1296590 - 1297456 + | IclR family transcriptional regulator Daci_1167 1298013 - 1297474 - | hypothetical protein Daci_1168 1298392 - 1300167 + | pseudouridine synthase Daci_1169 1300297 - 1300860 + | ECF subfamily RNA polymerase sigma-24 factor TERM 1016 1300959 - 1300991 + G 71 -11.2 -3.62096 | gap 1, overlap 1300958 CTGGGCCGGCCCTTG CCGGCCGG-CGTGGC GCGG GCGGCGGCCGGCTGG TTTGCGCTGCTGCAA Daci_1170 1300860 - 1301930 + | anti-FecI sigma factor, FecR TERM 1017 1301907 - 1301935 + F 78 -4.4 -4.76802 | TGGTGGGTGGTGGTG GAGCCTGCGCAG GCGCG CGGCTGAGGCTC TTTCTTCTTTTTCGC Daci_1171 1302049 - 1304460 + | TonB-dependent siderophore receptor Daci_1172 1305165 - 1304485 - | 2OG-Fe(II) oxygenase TERM 1018 1305239 - 1305211 - R 100 -18.9 -5.00616 | opp_overlap 1305211 GTGTCCCGCAAAAAA GCCCCGCAGGC GGCGATG GCCTGCGGGGC TTTGCGGTGATCTGC TERM 1019 1305211 - 1305239 + r 100 -18.9 -3.63068 | opp_overlap 1305211 GTGTCCCGCAAAAAA GCCCCGCAGGC GGCGATG GCCTGCGGGGC TTTGCGGTGATCTGC Daci_1173 1307523 - 1305298 - | TonB-dependent siderophore receptor TERM 1020 1305837 - 1305847 + g 75 -8.2 -4.1899 | opp_overlap 1305825, overlap 1305832 ACAGCGCGGCCGTCA GCGC CAG GCGC TTTTCCATCAGGTCC TERM 1021 1307697 - 1307680 - R 100 -12.7 -5.28481 | opp_overlap 1307680 GATTCAATGAAAAAA GCGGCTG TCGC CAGCCGC TTGAGTCTGCTGCGG TERM 1022 1307680 - 1307697 + r 74 -12.7 -3.14468 | opp_overlap 1307680 GATTCAATGAAAAAA GCGGCTG TCGC CAGCCGC TTGAGTCTGCTGCGG Daci_1174 1308443 - 1307739 - | MIP family channel protein TERM 1023 1308484 - 1308522 + H 72 -11 -3.31144 | gap 1, opp_overlap 1308514 1308515 CATTGCGCCCGGGCC CTGCGCGCACCGTCCGC CGCACA GCGGAAAGTG-GCGCAG TTATAGCCCTGCGCC Daci_1175 1308687 - 1310639 + | heat shock protein 90 TERM 1024 1310727 - 1310753 + F 100 -18 -4.64766 | opp_overlap 1310718 AGATCAGCATTGCAA GCCGGTGCCAGC CAA GCTGCCACCGGC TTTTTCACGTCTGCG TERM 1025 1310799 - 1310784 - f 76 -6.1 -4.72272 | TTCCGTGAGGAAAAA CGACC GGAAAA GGTCG ACTCACGAAAAACTC TERM 1026 1311761 - 1311792 + G 72 -13.6 -3.1355 | overlap 1311757 CTCAGCTGCACGCGC GGCGGCCCGGTGCT GCCC GGCGCCGTGCTGCC TTCCATCTCCGTGCC Daci_1176 1311005 - 1314613 + | hypothetical protein TERM 1027 1314623 - 1314668 + F 100 -27.1 -3.55444 | gap 1, overlap 1314632 CGGTGATGCGCCCGT GACGGCAAGGGCCGGTGGCGTG ATT CACGC-ACCGGCCTTTGTCGTC TTTGAGCGGTCCGAA TERM 1028 1314632 - 1314659 + F 100 -17.8 -4.1043 | gap 1, overlap 1314623 GCCCGTGACGGCAAG GGCCGGTGGCGTG ATT CACGC-ACCGGCC TTTGTCGTCTTTGAG Daci_1177 1314688 - 1315314 + | hypothetical protein Daci_1178 1315325 - 1316080 + | hypothetical protein TERM 1029 1316120 - 1316176 + T 84 -11.6 -4.11216 | CCTGCGCGGGCATGG GCGGCAGCAGGCC-GCGCTCGGTGAT GAAGTCG ATCACCTCGCGCAGGCCC-TTGCCGC TTTTCACGCTGCCCA Daci_1179 1316741 - 1316100 - | urease accessory protein UreG Daci_1180 1317478 - 1316762 - | urease accessory protein UreF Daci_1181 1318121 - 1317471 - | UreE urease accessory domain-containing protein TERM 1030 1318060 - 1318103 + g 75 -9.4 -4.16842 | gap 1, overlap 1318064 TCCAGCGTGGCGGCG CGCCTG-ACCAGCACGGCGGC AAG GCCGCCGCCCTGGGGCATGTG TTTGTTGACGGTGAG TERM 1031 1318160 - 1318142 - R 78 -5.2 -4.75289 | overlap 1318144 GATCAGAACAGAAAA TACCGCTG CGC CATCGGCA GCTCGGTGGCGGGCT Daci_1182 1319832 - 1318129 - | urease subunit alpha TERM 1032 1318806 - 1318774 - G 74 -13.3 -3.38768 | opp_overlap 1318772 GGAGATCATGGAGAA GGCGCCCAGGTCGTG CAG CACGTCCTCGGCGGC GATGGTCTCGCGGCG Daci_1183 1320315 - 1319998 - | urease, beta subunit Daci_1184 1320942 - 1320331 - | HupE/UreJ protein Daci_1185 1321256 - 1320954 - | urease, gamma subunit Daci_1186 1322191 - 1321274 - | urease accessory protein UreD TERM 1033 1321408 - 1321450 + g 72 -13.3 -3.18264 | gap 1 GCAGCAGCACCGAGG GTGCGCCGCCCTGGCCGGCC AGCA GGCTGGCGCCGGC-GCGCAC TTCATCGCTCCAGGG Daci_1187 1323656 - 1322391 - | major facilitator transporter TERM 1034 1323375 - 1323318 - G 74 -12.7 -3.62096 | gap 1 CGCCAGCAGCGCAAA GCTGTGCGCCATGCCGCTGGCCAGCA TGCCCAG CGC-GGCCAGCAGCATCAGGCCCAGC ACCAGGCGGCGGCGT Daci_1188 1324230 - 1323703 - | endoribonuclease L-PSP TERM 1035 1324306 - 1324289 - H 73 -9.9 -3.57144 | opp_overlap 1324305 CTTGCCAGTGTGAAA CCTCAAC CAAA GTTGAGG TCAAATGCAGGCCTG Daci_1189 1324360 - 1324830 + | MerR family transcriptional regulator Daci_1190 1326023 - 1324854 - | major facilitator transporter TERM 1036 1326146 - 1326110 - H 82 -12.8 -3.68265 | AAAGCGAAGGGGAAA GCGGCGCCGCGCAGGC CTGGC GCCACCGGGGCGCCAC GGCGCTGTCCGGGAG Daci_1191 1326344 - 1326823 + | hypothetical protein TERM 1037 1326857 - 1326845 - T 73 -10.5 -3.65425 | opp_overlap 1326853 GCGAGAGAGGGGAAA GGCGC GTA GCGCC TCAGGGGGTGCTTCT Daci_1192 1327825 - 1326875 - | response regulator receiver modulated diguanylate cyclase Daci_1193 1329006 - 1327942 - | serine/threonine protein kinase TERM 1038 1329320 - 1329333 + G 75 -5.9 -4.42386 | CAGCTGCATGTGACC CTGGC CACG GCCGG TTTTCTGGATGGCGA TERM 1039 1329684 - 1329651 - g 100 -23.9 -3.41878 | TGCTGCAATGGATAA GCGGCCTGCCGGTGC TGGA GCACTGGCAGGCCGC CGTGGGCGAGATCGC Daci_1194 1329071 - 1329808 + | hypothetical protein Daci_1195 1330225 - 1329809 - | OsmC family protein Daci_1196 1330757 - 1330290 - | MarR family transcriptional regulator Daci_1197 1331666 - 1330851 - | enoyl-CoA hydratase/isomerase TERM 1040 1331264 - 1331247 - G 72 -8.3 -4.09685 | CTCCAGTTGGGAAAA GCGGCAG TCAT CGGCCGC GACCACGATGTCGGC TERM 1041 1331752 - 1331725 - R 81 -14 -3.29511 | opp_overlap 1331727, overlap 1331727 CGCAGTCGCGCAGAA GACGGCCGGCCC GTGC GGGCCGGCAGGC CAAGGCCGTTTATCA TERM 1042 1331750 - 1331727 - R 82 -15.2 -3.21593 | opp_overlap 1331727, overlap 1331725 CAGTCGCGCAGAAGA CGGCCGGCCC GTGC GGGCCGGCAG GCCAAGGCCGTTTAT Daci_1198 1332613 - 1331765 - | 3-hydroxybutyryl-CoA dehydrogenase TERM 1043 1332404 - 1332440 + g 78 -6.3 -4.5774 | GGTCGATGTCTTGAT GCGGGCCAGGGCGGCGG TCT TCTCTGCCTCGGTCAGC TTTTCCTTCTTGATC TERM 1044 1333948 - 1333990 + G 86 -6.1 -4.82901 | gap 2, overlap 1333930 TGGCAGCCTGCGCCT GGCCAGTGCCGACCCGCTGGC CCT GCC-GCTGGTGGACCC-GGCC TTTTTCTCCGACGCG Daci_1199 1332770 - 1334362 + | glucose-methanol-choline oxidoreductase Daci_1200 1335627 - 1334359 - | diguanylate cyclase TERM 1045 1334696 - 1334717 + g 74 -11.5 -3.76224 | opp_overlap 1334692 AGCAGGCAGAACTCC TCGCCGCCC CAGC GCGCGGCGA TTTCGTCGCTGCGCA TERM 1046 1335515 - 1335493 - G 74 -11.2 -3.75024 | overlap 1335494 CTGCATCAGGAAGAA GTGCTGCGCA TGG CGCGCCGCAC CGCTGACGCGCCGCC TERM 1047 1335613 - 1335601 - G 81 -3.3 -4.87665 | GGTCATGGAGAAAAA GTCCA GGG TGGGC AGCGTGGATGGCATG Daci_1201 1337186 - 1335690 - | AMP nucleosidase Daci_1202 1339268 - 1337190 - | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) TERM 1048 1338068 - 1338090 + g 72 -3.2 -4.62069 | GCATGGCGCTTTCGG CGCGGTTGAG CAG CTCTTCGGCG TTTTTCCCGTCGCCG TERM 1049 1339351 - 1339401 + r 100 -6.1 -5.75342 | gap 2, overlap 1339355 1339383 AGCGGCCGCTGACGC GAGGGGGCGC-GT-GCGGCTGTCGA GCA TCGGGAGCCGCCATGGCGGCCTGTC TTTTTTTTGCAGCGC TERM 1050 1339410 - 1339436 + r 100 -15.8 -4.0825 | GCCTGTCTTTTTTTT GCAGCGCCGCAT CAC GTGCGGCGCGGC TTCTTTACTTGAGCA Daci_1203 1340031 - 1339441 - | hypothetical protein TERM 1051 1340053 - 1340013 - G 70 -3.3 -4.40358 | gap 3, overlap 1340014 1340015 ATGCACTGTAGAAAA TGCCGCCGCCGCGCA-CCAT TCGG ACGGCTACGCG-CGGCG-CT GCGTAGAAATACGGA Daci_1204 1340746 - 1340105 - | two component LuxR family transcriptional regulator Daci_1205 1342389 - 1340743 - | histidine kinase Daci_1206 1342430 - 1343380 + | cation diffusion facilitator family transporter Daci_1207 1343377 - 1343847 + | D-tyrosyl-tRNA deacylase TERM 1052 1343928 - 1343915 - f 71 -8.1 -4.07568 | opp_overlap 1343914 1343912 1343915 GTCCTGGCCGGAAAA GGGCT GCAA AGCCC GTATTCTTGCGGCCT Daci_1208 1343970 - 1345745 + | hypothetical protein TERM 1053 1345769 - 1345792 + F 100 -14.6 -5.1356 | opp_overlap 1345769 TGGGATGTAAAGAAA GGCGCCTTGT ACAA GCAAGGCGCC TTTTTATTCCTGGGA TERM 1054 1345792 - 1345769 - f 100 -13.9 -4.46112 | opp_overlap 1345769 TGGGATGTAAAGAAA GGCGCCTTG TACAAG CAAGGCGCC TTTTTATTCCTGGGA Daci_1209 1345861 - 1346874 + | CRISPR-associated Cas1 family protein TERM 1055 1348206 - 1348253 + T 82 -14.7 -3.21416 | opp_overlap 1348202 1348203 TGGCAGGACAAGGCC GCCGACCTGGCTGCCAGCGTG CGCCAC CGGGCCGCCAGCCAGGGCGGC TTCATCGTCAACATG TERM 1056 1349110 - 1349131 + T 71 -7.9 -4.11216 | gap 1, overlap 1349111 GCTGGCAGGGGCTGG ACCCGGCCGC GCG GCG-CCGGGA TTTTGCGCATCGCGC Daci_1211 1350672 - 1350361 - | XRE family plasmid maintenance system antidote protein TERM 1057 1350535 - 1350487 - G 73 -12.9 -3.53012 | overlap 1350490 GGCGTCGCCCCCAAA GAAGCGGCTCAGCCGCAGCGCCG TGT CGGCCGTGATGCCGCGCCGCTCC AGCACGATGTCGTTC TERM 1058 1350532 - 1350490 - G 77 -11 -3.90744 | overlap 1350487 GTCGCCCCCAAAGAA GCGGCTCAGCCGCAGCGCCG TGT CGGCCGTGATGCCGCGCCGC TCCAGCACGATGTCG Daci_1212 1351032 - 1350751 - | plasmid maintenance system killer Daci_1213 1351203 - 1352600 + | CRISPR-associated Csy1 family protein TERM 1059 1353615 - 1353571 - g 81 -9.7 -4.29738 | GCACACCGATGAAAA GCGGGGCCTTTACCGCTGCCG CAG CGGCTACGTGCCAGACCCCGC AGCCGTGGCCGACCC Daci_1214 1352597 - 1353685 + | CRISPR-associated Csy2 family protein TERM 1060 1354471 - 1354459 - g 79 -5.5 -4.77036 | overlap 1354467 GGGCAGCACCAAAAA GAGCA AGA CGCTC TACCAGATCGGTGAA TERM 1061 1354581 - 1354524 - g 72 -6.1 -4.38712 | gap 1, overlap 1354525 1354526 TCCACTCCCAGAAAA TCGGCAACGCCCTGCGCACCATCGACAC CTG GTA-CGACGGCGCGCAGGACCTGGGCCC CATCGCGGTCGAGCC TERM 1062 1354667 - 1354648 - g 70 -3.5 -4.42238 | CCAGCCCAAGCAAAA GCAGGAC TTCTAC ACCCTGC TGGACGACTGGCTGC Daci_1215 1353740 - 1354768 + | CRISPR-associated Csy3 family protein TERM 1063 1355161 - 1355144 - g 72 -8.4 -3.97368 | overlap 1355154 GGCGCAAGGGAGAAA CCGCAG AACAGG CTGCGG CCGCCATCCCCGACA TERM 1064 1355305 - 1355343 + G 100 -11.7 -4.83169 | gap 1, opp_overlap 1355290, overlap 1355305 GGCTTCAACACCTAC GGG-CTGAGCCTGGGAAC TGCT GTTCCCTGGTTCTGACCC TTTTTCTGGCGGCCT Daci_1216 1354768 - 1355340 + | CRISPR-associated Csy4 family protein TERM 1065 1357192 - 1357248 + T 77 -8.2 -4.43392 | opp_overlap 1357178, overlap 1357194 ACACTGCAGGAATTG CG-GTGCAGAGATTTCGGAGTTCGCTGC CGC GTAGGCAGCTCAGAAATCTCT-CACTCG TTGTTTTGGTTTTCA TERM 1066 1357532 - 1357483 - T 76 -7.1 -4.53475 | gap 1, overlap 1357486 1357487 AGCTCAGAAAAACAA GAACTGCCCGGAGGGCAACAGAAC CAT GTTC-GCTGCCGCGTAGGCAGCTC AGAAAGCCGTCATGG TERM 1067 1357500 - 1357486 - T 77 -7.8 -4.36508 | overlap 1357483 1357487 TCAGAAAAACAAGAA CTGCCC GGA GGGCAA CAGAACCATGTTCGC TERM 1068 1359128 - 1359144 + T 81 -7.9 -4.59773 | overlap 1359104 1359102 1359120 1359124 AGTCCATGGAGCCGC GCTGCTG TTT CCGCAGC TTTTTCCGCATCCGA Daci_1217 1359560 - 1359174 - | hypothetical protein Daci_1218 1359996 - 1360241 + | hypothetical protein Daci_1219 1361212 - 1360454 - | hypothetical protein Daci_1220 1362392 - 1361403 - | LysR family transcriptional regulator Daci_1221 1362466 - 1363413 + | hypothetical protein TERM 1069 1363591 - 1363615 + G 72 -13.5 -3.15663 | CCGGGCGCCCGGCGA GCCCGGGGGCG GCA TGCCTTCGGGC TTCGTGGCGCTCAAT Daci_1222 1363436 - 1364692 + | L-carnitine dehydratase/bile acid-inducible protein F Daci_1223 1364734 - 1365720 + | quinone oxidoreductase Daci_1224 1366193 - 1365735 - | hypothetical protein Daci_1225 1367229 - 1366258 - | PhoH family protein TERM 1070 1366768 - 1366729 - G 72 -13.4 -3.14132 | GTCGCCGGGCAGGAA GCCCAGGCGCTCGCCCGC TTCC ACGGCCGGGCGCGTGAGC ACGATGCGCTGCACG TERM 1071 1367343 - 1367327 - H 100 -15.1 -4.26076 | GGACGGGCATGAAAA GCCGCCC CCA GGGCGGC AAAGGACACCAATGA TERM 1072 1367409 - 1367393 - g 91 -3.5 -5.40072 | GCTGCTGGAAAAAAA CCCGCCC GAG GTGCTGG TGGACTGCGGCGGCG Daci_1226 1367355 - 1367927 + | Holliday junction DNA helicase RuvA TERM 1073 1368909 - 1368930 + G 75 -5.1 -4.56597 | gap 1, overlap 1368885 CGAGGACGTGATCGA GCCCTATCTG ATC CAGC-AGGGC TTTTTGCAGCGCACG Daci_1227 1367935 - 1369020 + | Holliday junction DNA helicase B Daci_1228 1369744 - 1369028 - | MgtC/SapB transporter Daci_1229 1372544 - 1369785 - | magnesium-transporting ATPase MgtA TERM 1074 1370792 - 1370833 + g 77 -10.9 -3.93556 | gap 3, overlap 1370802 1370804 TCAGCAGCTTGACGG CCACG-CCG-TGCGC-GGCC AGGGC GGCCAGCGCCTCGGCCGTGG TTTCCTTCGGTGGGT TERM 1075 1371782 - 1371819 + g 79 -11.2 -4.07568 | opp_overlap 1371764 1371767, overlap 1371773 GGTTGCTGGCATCCA GCACGCCGGTGCCATT CGATGC ACTGGCGTCGGCGCGC TTTTCCACGGGCAGG TERM 1076 1372266 - 1372278 + g 72 -6.2 -4.30576 | overlap 1372258 CCACAGGTGCAGCCA GCCG GGCAG CGGC TTTTCGTGCTCGACC Daci_1230 1372775 - 1372563 - | hypothetical protein TERM 1077 1372973 - 1373010 + r 85 -17.1 -2.91912 | opp_overlap 1373003 1373004 TGATGACGTGTTGCA TGGCGGGCTTCTTTCGT TGCG GCGGAAGAAGCCCGGCA TCTGTCCATCAATGG Daci_1231 1373422 - 1373186 - | hypothetical protein Daci_1232 1375554 - 1373674 - | YhhN family protein TERM 1078 1376780 - 1376750 - g 71 -3.1 -4.56133 | overlap 1376751 CCTGAAGAAGGAAAA GGCGAGCTACACG CAGAT CGTCAAGTCCGCC AATATCCAGGTGGAA Daci_1233 1375659 - 1376798 + | hypothetical protein TERM 1079 1376815 - 1376826 + F 93 -7.2 -5.16572 | overlap 1376809 CCGCGCTGGCAGTCA GCGG GTGA CCGC TTTTTTCCATTGAAT TERM 1080 1376978 - 1377001 + G 86 -9.6 -4.66833 | gap 1, opp_overlap 1376973 1376976 TGGAGAAAATCATGC GCCGG-GCCAT GGC ATGGCTCTGGC TTTTTGCGCTTGCCG Daci_1234 1376974 - 1378140 + | hypothetical protein TERM 1081 1378511 - 1378547 + G 73 -12.2 -3.40907 | gap 1, overlap 1378527 GGCCAACTCTGCTGT GGCCAGGGGCGGTCCCG CAGG CCGG-TCGCCGCTGGCC TTCATGTTCGTCTCG Daci_1235 1378131 - 1379270 + | hypothetical protein TERM 1082 1379287 - 1379311 + F 100 -21.5 -5.23016 | CGCTGCGGCTTCCAA GGTCCGGCTGC CAT GCAGCCGGACC TTTTTTCCGTTCTTT Daci_1236 1379418 - 1380080 + | hypothetical protein Daci_1237 1380107 - 1381561 + | hypothetical protein Daci_1238 1382253 - 1381612 - | phosphoglycerate mutase TERM 1083 1382319 - 1382282 - R 70 -4.3 -4.56597 | gap 3, overlap 1382284 GGGGTGCTGCAAAAA GA-GCAGGCATTGTCCCG CAAGC CAGG-CAA-GCCTGCATC GCGCGCCACCGTTGA Daci_1239 1382885 - 1382400 - | hypothetical protein TERM 1084 1383047 - 1383081 + H 71 -7.7 -4.08958 | gap 1, overlap 1383063 TGGCCTGTCCATGAT GGCCGCACGCCAATGG CGGG CCGCAGGCG-GCGGTC TTGTTATTTGGAAAT Daci_1240 1383241 - 1384833 + | extracellular solute-binding protein TERM 1085 1384858 - 1384894 + G 78 -10.1 -4.18644 | gap 1, overlap 1384858 CTGGTCCATCTGCTG C-GCCGGCTGGGCCAG TCCGCC CTGGTCCTGCTGGCCG TTTCCTTTGTCTCGT Daci_1241 1384840 - 1385805 + | binding-protein-dependent transport systems inner membrane component Daci_1242 1385802 - 1386740 + | binding-protein-dependent transport systems inner membrane component Daci_1243 1386737 - 1388464 + | ABC transporter related Daci_1244 1388815 - 1388492 - | putative transcriptional regulator Daci_1245 1389171 - 1388812 - | addiction module killer protein TERM 1086 1389278 - 1389295 + r 89 -12.7 -4.08485 | opp_overlap 1389278 GATGGACCCAAAAAA GGCCTGC GGAT GCAGGCC TTTGCTTTGGGTGCG TERM 1087 1389295 - 1389278 - R 100 -12.7 -5.09895 | opp_overlap 1389278 GATGGACCCAAAAAA GGCCTGC GGAT GCAGGCC TTTGCTTTGGGTGCG Daci_1246 1390013 - 1389318 - | hypothetical protein TERM 1088 1390037 - 1390054 + r 76 -12.7 -3.35813 | opp_overlap 1390037 CCTTGGTCGAAAAAA GGCCCGT TTGC ACGGGCC TTGGTTGGAGTGGGG TERM 1089 1390054 - 1390037 - R 100 -12.7 -5.00616 | opp_overlap 1390037 CCTTGGTCGAAAAAA GGCCCGT TTGC ACGGGCC TTGGTTGGAGTGGGG Daci_1247 1391032 - 1390091 - | PP-loop domain-containing protein TERM 1090 1390546 - 1390562 + g 72 -13.7 -3.14132 | CGATGTCGTCGCGGT GGTGGCC CAG GGCCACC TTGGTGCAGCCCAGC Daci_1248 1391890 - 1391045 - | fatty acid hydroxylase TERM 1091 1391463 - 1391447 - G 76 -2.3 -4.77438 | overlap 1391449 AGTGATGATGAAAAA TCGAAAA CCC TCTTCAA GCCAGTGATGGCGTC Daci_1249 1392402 - 1392031 - | dihydroneopterin aldolase TERM 1092 1392269 - 1392318 + g 79 -4.8 -4.72272 | overlap 1392271 CGCGGCGCCAGCGGT TGGGTGCCCAGGCTCAGCTCGG CATCGA CCTGGATGGGCTGGGGCATCTG TTTTTCGTGGGCGAG Daci_1250 1393230 - 1392445 - | short-chain dehydrogenase/reductase SDR Daci_1251 1393347 - 1394360 + | hypothetical protein Daci_1252 1395400 - 1394387 - | hypothetical protein Daci_1253 1395429 - 1395623 + | hypothetical protein TERM 1093 1395639 - 1395653 + F 70 -12.8 -2.87881 | opp_overlap 1395639, overlap 1395640 GCATGGCTTGAAGCA CGGGCG CGC CGCCCG TATATGCAGGCATTG Daci_1254 1395698 - 1396132 + | thioredoxin Daci_1255 1396859 - 1396176 - | two component transcriptional regulator Daci_1256 1396928 - 1398886 + | histidine kinase Daci_1257 1400165 - 1398912 - | polynucleotide adenylyltransferase/metal dependent phosphohydrolase TERM 1094 1399276 - 1399301 + g 86 -10.3 -4.56597 | overlap 1399277 1399279 1399280 1399281 AGTTCGCGGCAGTCG GTGGGCACGCG CAGC CGCTCGCCCAC TTTTTCGGCCAGGCG TERM 1095 1400138 - 1400117 - G 74 -13.7 -3.28712 | gap 1 CGGCCCGCCCCAGAA GGCGGTCGCG CAC CGCG-CCGCC CACCATGTACACCTG Daci_1258 1400260 - 1401801 + | peptidase dimerisation domain-containing protein Daci_1259 1402523 - 1401834 - | glutathione S-transferase domain-containing protein Daci_1260 1402612 - 1403370 + | exsB protein TERM 1096 1403402 - 1403390 - T 70 -3.3 -4.61231 | overlap 1403380 1403391 GCACAGCGCTAAAAA CCGGC GCG GCCAA AAGCGAGGGACACCG Daci_1261 1404084 - 1403512 - | 5-formyltetrahydrofolate cyclo-ligase TERM 1097 1404711 - 1404690 - g 70 -12.3 -3.33261 | gap 1 GGCCAATCGCCAGAA GGCCACGCGC GAT GC-CGTGGCC ATCGTCGCTCCCGAG Daci_1262 1404100 - 1406079 + | lytic transglycosylase catalytic Daci_1263 1406187 - 1406750 + | hypothetical protein Daci_1264 1407858 - 1406899 - | beta-lactamase domain-containing protein Daci_1265 1409645 - 1407945 - | AMP-dependent synthetase and ligase TERM 1098 1409778 - 1409788 + rH 74 -3.2 -4.72473 | TGTCCTAGGGCCTGT GCTA CGT TGGC TTCTTTTTTCATTGG Daci_1267 1411653 - 1410763 - | phenylalanine 4-monooxygenase Daci_1266 1409816 - 1410814 + | PGAP1 family protein TERM 1099 1411738 - 1411757 + Tr 74 -11.4 -3.51778 | opp_overlap 1411708, overlap 1411736 GCTGGCGGATTCGGG CGGCCTGT ACCA GCAGGCCG TATTTGCTGTGCTCG Daci_1268 1412800 - 1411718 - | hypothetical protein TERM 1100 1413027 - 1413043 + H 73 -4.3 -4.70879 | GTGCTGTCACTGTAG GCGGGAG GGG CTTCAGC TTTTTGCCGTTTGCC Daci_1269 1413176 - 1413658 + | AsnC family transcriptional regulator TERM 1101 1413764 - 1413775 + F 74 -3.6 -4.75356 | overlap 1413758 GCAATATCTCCGTTG CTCG ACAT CGGG TTTTTACCTATATTT Daci_1270 1413850 - 1414521 + | GCN5-related N-acetyltransferase TERM 1102 1414553 - 1414591 + F 73 -8.9 -3.96216 | gap 1 GGGAATTGGCGCAGC GCATGCAGGGGTGACGGA GCAA TCCGCTATCCTTGCA-GC TTGTTTCACTACCGC TERM 1103 1414716 - 1414689 - g 75 -10.5 -4.08064 | AAGCTTCCTGCAAAA GGTGGCCGAGT TCATCC ACCCGGCCCCC GACTCTCCCGACGAG Daci_1271 1414585 - 1415508 + | CBS domain-containing protein Daci_1272 1415583 - 1417235 + | apolipoprotein N-acyltransferase TERM 1104 1417241 - 1417264 + F 71 -5.3 -4.37658 | gap 2, opp_overlap 1417240 GGGGCTGTAGCCAAG GCC-CG-CGAC CTGG GTCGGCGTGGC TTTTGTGGCAGAGTT Daci_1273 1417414 - 1417938 + | 3-hydroxydecanoyl-(acyl carrier protein) dehydratase TERM 1105 1418043 - 1417994 - g 74 -16.5 -2.72344 | gap 1, overlap 1418042 GTGCATCGGCAACGA CCTCGATA-CCGTGGAGACCTCGC TGC GCGAGGGCCGCACGGGCATCAAGG CCATGCCGAAGTTCA Daci_1274 1417935 - 1419158 + | Beta-ketoacyl synthase TERM 1106 1419215 - 1419199 - f 100 -10.8 -4.8622 | opp_overlap 1419199 GTCCTGAAGGAAAAA GCCCGC CTCCT GCGGGC TTTTTTACTGGCGAG TERM 1107 1419199 - 1419215 + F 100 -10.8 -5.14563 | opp_overlap 1419199 GTCCTGAAGGAAAAA GCCCGC CTCCT GCGGGC TTTTTTACTGGCGAG Daci_1275 1419323 - 1420393 + | dTDP-glucose 4,6-dehydratase Daci_1276 1420390 - 1421292 + | dTDP-4-dehydrorhamnose reductase TERM 1108 1421598 - 1421612 + G 79 -11.4 -4.05446 | opp_overlap 1421576 CAGCCCAGCCCGGAC GGCCTG GCA CAGGCC TTTCTGATTGCCGAG Daci_1277 1421334 - 1422224 + | glucose-1-phosphate thymidylyltransferase Daci_1278 1422221 - 1422769 + | dTDP-4-dehydrorhamnose 3,5-epimerase Daci_1279 1423657 - 1422776 - | LysR family transcriptional regulator Daci_1280 1423871 - 1425322 + | permease for cytosine/purines uracil thiamine allantoin TERM 1109 1425741 - 1425710 - g 70 -13 -3.31144 | gap 1, opp_overlap 1425711, overlap 1425683 1425711 CGCCGAGGCCGACAA CGCCGGCCAGC-GCA GCG TGCTGCTGGCCGACT TCCATGTCTGCCTGG TERM 1110 1425711 - 1425740 + G 72 -14.3 -3.16475 | gap 1, opp_overlap 1425683 1425711 1425710 GCCGAGGCCGACAAC GCCGGCCAGC-GCA GCG TGCTGCTGGCCGAC TTCCATGTCTGCCTG TERM 1111 1425740 - 1425711 - g 73 -16.5 -2.58544 | gap 1, opp_overlap 1425711, overlap 1425683 1425710 GCCGAGGCCGACAAC GCCGGCCAGC-GCA GCG TGCTGCTGGCCGAC TTCCATGTCTGCCTG Daci_1281 1425333 - 1426082 + | GntR family transcriptional regulator Daci_1282 1426281 - 1427324 + | 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component TERM 1112 1428090 - 1428114 + G 74 -12.7 -3.55444 | TGCGCATCGGCGAGG CCAGCCTGCGC TGT GCGCTGGCCGG TTTCGAGCCTGGCGC Daci_1283 1427339 - 1428412 + | ABC transporter related Daci_1284 1428409 - 1430187 + | 2-aminoethylphosphonate ABC transport system, permease protein Daci_1285 1430220 - 1431335 + | FAD dependent oxidoreductase Daci_1286 1432523 - 1431351 - | hypothetical protein Daci_1287 1433718 - 1432603 - | DNA binding domain-containing protein TERM 1113 1432839 - 1432864 + g 73 -7.6 -4.23723 | opp_overlap 1432816, overlap 1432836 ACGCCTGGCCCTGGC CGGCCGGT-GCG CCAC CGCCACCG-CCG TTTTGCATGCTCTTC Daci_1288 1434077 - 1435015 + | glycyl-tRNA synthetase subunit alpha Daci_1289 1435050 - 1437164 + | glycyl-tRNA synthetase, beta subunit Daci_1290 1437220 - 1437789 + | histidinol-phosphate phosphatase family protein Daci_1291 1437940 - 1438680 + | phospholipid/glycerol acyltransferase Daci_1292 1438697 - 1439623 + | hypothetical protein Daci_1293 1439714 - 1440154 + | rhodanese domain-containing protein Daci_1294 1441112 - 1440177 - | LysR family transcriptional regulator Daci_1295 1441218 - 1442192 + | hypothetical protein Daci_1296 1442194 - 1442952 + | Asp/Glu/hydantoin racemase TERM 1114 1442969 - 1442984 + T 82 -11.8 -3.85698 | opp_overlap 1442969, overlap 1442981 1442983 TCTTTCCTTGAGAAA GGCCGC TATT GCGGCC TTTCTCGGAGCGGGG TERM 1115 1442984 - 1442969 - T 82 -11.8 -3.85698 | opp_overlap 1442969 1442981 1442983 TCTTTCCTTGAGAAA GGCCGC TATT GCGGCC TTTCTCGGAGCGGGG TERM 1116 1443103 - 1443058 - T 76 -14.5 -2.52491 | opp_overlap 1443064, overlap 1443057 GAGACACCGATCAAG GGCCGCCCCGCCGCGAGGGTG TCGT CCCCCTCGGGGGGAAGCGGCG ACGCCGCTCAGGGGG Daci_1297 1443592 - 1443122 - | transport-associated protein TERM 1117 1443338 - 1443365 + g 72 -4.8 -4.4078 | CACCGACTGCACGCT GGAGACGTTG CCGCAGCA CAGCGTCACC TTTTCCTTGACCGCC TERM 1118 1443529 - 1443554 + g 72 -8.9 -4.09739 | overlap 1443530 1443542 GCGCAGGCTCGGCTG CCTGTGCGGCG CTGC CGCCGAACAGC TTTTCGCCGGCTTCC Daci_1298 1443736 - 1444590 + | pantothenate kinase TERM 1119 1444607 - 1444624 + F 70 -9.8 -3.55368 | GCCACTTTGATCGTG CGGCGC AGCATC GCGCCG TTGTATCCGTTGCGT TERM 1120 1444659 - 1444701 + F 70 -10.4 -3.53444 | opp_overlap 1444654, overlap 1444654 GTTGATGACAGCGCT GGTGCCGGGTGCAGGGGC GGCCTTG GACCCCGCATCCGGAGCC TTTCGCGGGGGATGC TERM 1121 1445985 - 1445957 - g 70 -8.7 -3.91897 | TGCGTGACGGAGAAA CCGCGCAGATCGC CGT GCAGTCCGCGCTG ACAGGCCACCTGGTG TERM 1122 1446152 - 1446191 + G 95 -10.5 -5.00616 | opp_overlap 1446144 GCAAGCAGCCCGACA CGCTGCCGGCCGCCGCC GTCGAG GGCAGCGGCCTCAAGCG TTTTTTGCGCGAGGG Daci_1299 1444741 - 1446468 + | general secretory pathway protein E Daci_1300 1446461 - 1447678 + | type II secretion system protein Daci_1301 1447711 - 1448151 + | general secretion pathway protein G Daci_1302 1448210 - 1448656 + | general secretion pathway protein H Daci_1303 1448656 - 1449060 + | general secretion pathway protein I Daci_1304 1449057 - 1449737 + | general secretion pathway protein J Daci_1305 1449734 - 1450522 + | general secretory pathway protein K Daci_1306 1450685 - 1451740 + | fimbrial assembly family protein Daci_1307 1451737 - 1452312 + | general secretion pathway protein M Daci_1308 1452309 - 1452977 + | hypothetical protein TERM 1123 1455295 - 1455277 - g 71 -9.6 -3.81146 | TGGTTCAACCAATAA TTCGATGC GGC GCACCGAA CTGCTCGTCATCATC Daci_1309 1452998 - 1455457 + | general secretion pathway protein D Daci_1310 1455499 - 1455921 + | hypothetical protein TERM 1124 1456005 - 1456061 + F 89 -13 -4.12532 | opp_overlap 1456010 1456013, overlap 1456008 1456010 TTTGCTCATTCAGTG CAAGACAAGGCCTACGGCTACCAGTG CAATC CCCCGGTAGTCATAGGCCTTGTGCTG TTTATATGTGCACCC TERM 1125 1456008 - 1456059 + F 82 -13.1 -3.65996 | gap 1, opp_overlap 1456010 1456013, overlap 1456005 1456010 GCTCATTCAGTGCAA G-ACAAGGCCTACGGCTACCAGTG CAATC CCCCGGTAGTCATAGGCCTTGTGC TGTTTATATGTGCAC TERM 1126 1456010 - 1456056 + F 81 -15.9 -2.93566 | opp_overlap 1456010 1456013, overlap 1456008 1456005 TCATTCAGTGCAAGA CAAGGCCTACGGCTACCAGTG CAATC CCCCGGTAGTCATAGGCCTTG TGCTGTTTATATGTG TERM 1127 1456056 - 1456010 - f 89 -18.1 -3.06492 | opp_overlap 1456008 1456005 1456010, overlap 1456013 TCATTCAGTGCAAGA CAAGGCCTACGGCTACCAGTG CAATC CCCCGGTAGTCATAGGCCTTG TGCTGTTTATATGTG TERM 1128 1456053 - 1456013 - f 88 -14 -3.67611 | opp_overlap 1456010 1456008 1456005, overlap 1456010 TTCAGTGCAAGACAA GGCCTACGGCTACCAGTG CAATC CCCCGGTAGTCATAGGCC TTGTGCTGTTTATAT Daci_1311 1456445 - 1458064 + | hypothetical protein TERM 1129 1458121 - 1458106 - f 95 -11.8 -4.60797 | opp_overlap 1458106, overlap 1458101 GGCTCATATATAAAA GCGGGG GAAA CCCCGC TTTTTTTTTGTTTTT TERM 1130 1458106 - 1458121 + F 100 -11.8 -6.60239 | opp_overlap 1458106 1458101 GGCTCATATATAAAA GCGGGG GAAA CCCCGC TTTTTTTTTGTTTTT TERM 1131 1458564 - 1458534 - g 79 -15.4 -3.31461 | opp_overlap 1458524, overlap 1458536 1458537 GATCGATGCGGACAA CACGCCTTCGGCAG CAG CTGCCGAAGGCCAG GCACGCAATATCTAC TERM 1132 1458562 - 1458536 - g 80 -16.6 -3.22475 | opp_overlap 1458524, overlap 1458534 1458537 TCGATGCGGACAACA CGCCTTCGGCAG CAG CTGCCGAAGGCC AGGCACGCAATATCT TERM 1133 1458561 - 1458537 - g 82 -20.1 -2.53271 | opp_overlap 1458524, overlap 1458536 1458534 CGATGCGGACAACAC GCCTTCGGCAG CAG CTGCCGAAGGC CAGGCACGCAATATC Daci_1312 1458145 - 1459080 + | PpiC-type peptidyl-prolyl cis-trans isomerase TERM 1134 1459143 - 1459167 + F 100 -17.2 -4.2558 | opp_overlap 1459159 1459160 GCGCCTGTTTTTTCG CGGCCTGCCT GTCAA AGGCAGGCCG TTTTGCTGCGGCCTG Daci_1313 1459226 - 1460026 + | ABC-2 type transporter Daci_1314 1460023 - 1461297 + | ABC transporter related Daci_1315 1461294 - 1462187 + | hypothetical protein TERM 1135 1462676 - 1462690 + G 72 -4.9 -4.41633 | CTGCATGCCTGTCTA CGCCC GGGCG GGGTG TTCTTTTTGCAGATC Daci_1316 1462208 - 1463089 + | methyltransferase type 12 Daci_1317 1465815 - 1463134 - | hypothetical protein TERM 1136 1463525 - 1463508 - G 70 -8.4 -3.8211 | opp_overlap 1463508 1463505 GCTCATCCAGAATAA CCCAGC GTTCCT GCTGGG TGGTTGTCAACGACT TERM 1137 1463795 - 1463769 - G 91 -3.7 -5.47159 | gap 2, opp_overlap 1463769 TTGCAAGAGAAAAAA GCGCAAGCCAGAT GCA AGC-GGCT-GCGC TGATTACCCCCATGA TERM 1138 1464612 - 1464580 - G 70 -3.3 -4.41633 | overlap 1464582 TATGGCGAAAAACAA TACATAGGCAGGCCA GCC TGACCACCCTACGGA AACAGGGGATGCGCT Daci_1318 1469784 - 1465840 - | glycosyl transferase family protein TERM 1139 1465948 - 1465966 + g 72 -3.9 -4.62069 | gap 1, overlap 1465937 GAGCGCTGTCAGAGC CCATGTCT GAGC AG-CATGG TTTTTCCGCTGCAGG TERM 1140 1466667 - 1466707 + g 74 -12.5 -3.61398 | opp_overlap 1466657 1466658, overlap 1466658 1466668 CGAAACCGGCAATCC GGCTGGCCGTGTCCTGGCT GGG GGCCAGCACATGGCGAGCG TTGTTCAGCAGCAGC TERM 1141 1466668 - 1466706 + g 74 -16 -2.76696 | opp_overlap 1466658, overlap 1466658 1466667 GAAACCGGCAATCCG GCTGGCCGTGTCCTGGCT GGG GGCCAGCACATGGCGAGC GTTGTTCAGCAGCAG TERM 1142 1467541 - 1467526 - G 78 -10.4 -4.24204 | opp_overlap 1467527 GATGTACATGCAAAA GCCCAC GCCG GTGGGC ACGTCCACCACCTGG TERM 1143 1469466 - 1469452 - G 70 -8.5 -3.85698 | GTGCTCGGCGAGAAA GGCGC CCAGC GCGCC GCTGCCGCAGCCCAG TERM 1144 1469733 - 1469718 - G 86 -6 -5.03314 | overlap 1469719 GCCAGGCGCAAAAAA TCCCGG AAGT CCGGGC GGCAGATTGTCGCGC Daci_1319 1469940 - 1470713 + | glycosyl transferase family protein TERM 1145 1471030 - 1471070 + G 72 -6.1 -4.34402 | gap 1, overlap 1471057 GCGCCTGAGCGTGCG CTACCGGC-TGGTGCTCA CCCTGC TGAGCGCCGTGCTGGCGG TTTTGCTGTGCGGCC TERM 1146 1471718 - 1471731 + G 76 -2.3 -4.70266 | TTTTGGAGCAACACG CCCGT TCTG GTGGG TTTTTGCCTGCTGTT Daci_1320 1470719 - 1471822 + | glycosyl transferase family protein Daci_1321 1471932 - 1472822 + | acetylglutamate kinase TERM 1147 1472908 - 1472923 + F 100 -11.8 -5.43553 | overlap 1472893 GCCGGTTTGCTGCAA GCCGCC TTTG GGCGGC TTTTGTTTTTTAGGT Daci_1322 1472944 - 1473663 + | two component transcriptional regulator Daci_1323 1473701 - 1475188 + | histidine kinase Daci_1324 1475271 - 1475966 + | nucleoid occlusion protein TERM 1148 1475977 - 1475994 + T 79 -12.7 -3.53012 | opp_overlap 1475970, overlap 1475986 TCTGAACATGGCCCA GCGGACC CCAG GGTCCGC TTTGCAGCAAAGCCA TERM 1149 1476027 - 1476006 - T 80 -11.5 -3.72576 | opp_overlap 1475986 1476006 CCGCTTTGCAGCAAA GCCACCCGC TTGT GCCGGTGGC TTTTTTTGCGACCAG TERM 1150 1476006 - 1476027 + T 100 -11.5 -5.40072 | opp_overlap 1476006, overlap 1475986 CCGCTTTGCAGCAAA GCCACCCGC TTGT GCCGGTGGC TTTTTTTGCGACCAG Daci_1325 1476582 - 1476070 - | hypothetical protein TERM 1151 1476162 - 1476182 + g 70 -3.2 -4.42653 | gap 1, overlap 1476159 1476158 CCGTAATCCCATGCT CGGCA-GCC AGTT GCCGTGCCG TTTTGTCCGTGGCGT TERM 1152 1476630 - 1476614 - H 71 -7.3 -4.19735 | opp_overlap 1476599 1476612 1476609 1476615, overlap 1476615 TGGTTCAAAAGGAAA CGGTTCA ATT TGAACCA TATTCTTGGTCCATA Daci_1326 1476729 - 1477343 + | putative phage repressor TERM 1153 1477455 - 1477478 + F 71 -8.9 -3.70811 | gap 1, overlap 1477462 CCTCTTTCATGCGTC CGTGCCTGCC CGAGC GGCAGG-ACG TTTGCGCTTGTCTGG TERM 1154 1477575 - 1477607 + F 70 -3.4 -4.67353 | gap 1, opp_overlap 1477580 1477581, overlap 1477583 CGCGCCTGTGGACGC TGAAACCGGGCCTGC ATAT GCAGGCCTTATT-CA TTTTTGCCTGCCTCG TERM 1155 1477583 - 1477600 + F 89 -12.7 -4.0257 | opp_overlap 1477581 1477580, overlap 1477575 TGGACGCTGAAACCG GGCCTGC ATAT GCAGGCC TTATTCATTTTTGCC Daci_1327 1477592 - 1478269 + | hypothetical protein Daci_1328 1478399 - 1479325 + | hypothetical protein Daci_1329 1479369 - 1479824 + | hypothetical protein Daci_1330 1479854 - 1480144 + | hypothetical protein TERM 1156 1480133 - 1480168 + F 70 -10.3 -3.53012 | overlap 1480134 GCGCTGCGCCAGCTC AACCGGGGCTGAGGC ATAGGG GCCTCGGCTCCGGCC TTTCAAGACAAACAC TERM 1157 1480134 - 1480167 + F 73 -13.8 -2.71712 | overlap 1480133 CGCTGCGCCAGCTCA ACCGGGGCTGAGGC ATAGGG GCCTCGGCTCCGGC CTTTCAAGACAAACA TERM 1158 1481540 - 1481524 - g 79 -2.2 -4.85545 | gap 1, overlap 1481525 1481528 AGCAAAGCAAGAAAA CCGACGC GCCT GCG-CAG AGGAAAGAGAAGCCT TERM 1159 1482121 - 1482077 - g 79 -2.9 -4.84761 | gap 2 AGATCTCCAGAAAAA GCTGCAG-GACATC-GCGG CCAAGAATC CCACGGATGCCGCTGCCGC CCAGAAGCTCAAGGA TERM 1160 1482455 - 1482476 + G 84 -5.1 -5.04597 | gap 1 AGGCGGCTTGCTCGG GTTGGCCGGC AAC GCAGGC-AAC TTTTTGTCTCTGGCT TERM 1161 1482750 - 1482766 + G 74 -12.3 -3.6692 | overlap 1482747 GGCTTGGCACTGTAT TCGCTGC TCA GCAGCGA TGTTTTCGGCTCCCG TERM 1162 1485155 - 1485131 - g 82 -10.8 -4.12942 | gap 1, overlap 1485145 GCAAAGCCTCGAAAA GATGGC-TCGC AAGA GCGACGCCATC GGCGTCAAGCAAAGG Daci_1331 1480215 - 1485182 + | hypothetical protein Daci_1332 1485179 - 1486114 + | hypothetical protein Daci_1333 1486092 - 1486793 + | hypothetical protein Daci_1334 1486784 - 1487896 + | hypothetical protein Daci_1335 1487893 - 1488435 + | hypothetical protein TERM 1163 1488479 - 1488464 - f 77 -11.8 -3.65699 | opp_overlap 1488464, overlap 1488460 TTGACAAACAACCAA GCCGGC ACCT GCCGGC TTTTTTTCGCCTGCC TERM 1164 1488464 - 1488479 + F 100 -11.8 -5.44119 | opp_overlap 1488464 1488460 TTGACAAACAACCAA GCCGGC ACCT GCCGGC TTTTTTTCGCCTGCC Daci_1336 1488585 - 1489292 + | TetR family transcriptional regulator Daci_1337 1489356 - 1491161 + | acyl-CoA dehydrogenase domain-containing protein TERM 1165 1491181 - 1491218 + F 78 -10.4 -3.85698 | overlap 1491215 CTTCACTCCAACATG GGAGCGCGGGCTGTGC GCATCA GCCTGGCCTGCGCACC TTTCTAGGCGAAGGG Daci_1338 1491242 - 1491682 + | hypothetical protein TERM 1166 1491694 - 1491712 + F 89 -17.4 -3.17219 | opp_overlap 1491686, overlap 1491685 GTAACCATTCCGGAG GGCGGCCG CAG CGGCCGCC TTCCTCCCACTTGTG Daci_1339 1491736 - 1494138 + | 3-hydroxyacyl-CoA dehydrogenase NAD-binding Daci_1340 1494162 - 1495358 + | acetyl-CoA acetyltransferase TERM 1167 1495365 - 1495392 + F 81 -7.6 -4.7078 | overlap 1495367 1495371 CGGGTCTGACCGTTG CTCAAGGCCCCG TTCG CGGGGCTTTGTC TTTTTCGCTCATTCC TERM 1168 1495367 - 1495390 + F 93 -14.6 -3.96486 | overlap 1495365 1495371 GGTCTGACCGTTGCT CAAGGCCCCG TTCG CGGGGCTTTG TCTTTTTCGCTCATT TERM 1169 1495371 - 1495386 + F 95 -11.8 -4.56791 | overlap 1495367 1495365 TGACCGTTGCTCAAG GCCCCG TTCG CGGGGC TTTGTCTTTTTCGCT Daci_1341 1495463 - 1496365 + | putative hydrolase TERM 1170 1496932 - 1496965 + G 72 -3.7 -4.58395 | gap 1, overlap 1496930 1496935 ACAGCCTCACGCGCC TGTGG-GTGCGCGACG AGC CGCCGCGCGCACTGGA TTTTTGCGCGCTGGC Daci_1342 1496403 - 1497233 + | hypothetical protein Daci_1343 1497250 - 1498044 + | enoyl-CoA hydratase TERM 1171 1498075 - 1498047 - g 71 -10.9 -3.55761 | overlap 1498048 CAGCCAGTGCTGAAA TCCACGAAGGCCT CCG AGGCCTCCGAGGC GCCCGTGCAGTTCGA Daci_1344 1498038 - 1498538 + | hypothetical protein TERM 1172 1498541 - 1498565 + T 85 -7 -4.86939 | opp_overlap 1498543, overlap 1498544 CATCGTTTCTTGAAG CATGGCCCGC CGACT GCGGGCCTTC TTTTTGCGTTTCTTC TERM 1173 1498544 - 1498562 + T 100 -13.1 -4.50298 | opp_overlap 1498543, overlap 1498541 CGTTTCTTGAAGCAT GGCCCGC CGACT GCGGGCC TTCTTTTTGCGTTTC Daci_1345 1499958 - 1498579 - | multi anti extrusion protein MatE TERM 1174 1498684 - 1498657 - G 72 -14.2 -3.23216 | gap 1 GGCCACGAGGATGAA CAGCGA-CTGGGC GCT GCCCAGGCCGCTG GACATGAGCCAGCCG TERM 1175 1499904 - 1499954 + g 74 -16.6 -2.72049 | opp_overlap 1499903 1499899, overlap 1499941 1499951 CGCTGACCAACGGAT GCGCTGACCCGCTGGCCGCAGCGC CAG GGGCTGCGGAGGGCAGGGCGGCGC TCATTCCGCGCTCTC Daci_1346 1500422 - 1499955 - | MarR family transcriptional regulator Daci_1347 1500641 - 1501306 + | hypothetical protein TERM 1176 1501359 - 1501327 - T 79 -13 -3.53012 | gap 1, opp_overlap 1501334, overlap 1501334 CTCTGCTGCCGGAAA TGAAAAA-GCGACCT GCGA AGGTCGCTTTTTTCA TGGCTGCAGAGGCGG TERM 1177 1501351 - 1501334 - T 100 -11.3 -4.98531 | opp_overlap 1501334, overlap 1501327 GCCGGAAATGAAAAA GCGACCT GCGA AGGTCGC TTTTTTCATGGCTGC TERM 1178 1501334 - 1501351 + T 100 -11.3 -5.1675 | opp_overlap 1501327 1501334 GCCGGAAATGAAAAA GCGACCT GCGA AGGTCGC TTTTTTCATGGCTGC Daci_1348 1501858 - 1501382 - | thioesterase superfamily protein TERM 1179 1502126 - 1502178 + G 73 -7.6 -4.11692 | AGGCCGGCGACGCCC GCGCGGT-GCTCGTCGTGCCCGTGGC CCT GTTGCTGGC-CTACGGGCTGCTGCGC TTTTCCAGCTCGCTG Daci_1349 1501900 - 1503726 + | ABC transporter related TERM 1180 1503716 - 1503704 - T 76 -10.5 -3.72576 | opp_overlap 1503705 GGGCGCTGCAGCAAA GCGGG GAG CCCGC CGTGCTGTAGCGCGG Daci_1350 1505754 - 1503787 - | peptidase S9 prolyl oligopeptidase Daci_1351 1505910 - 1506668 + | GntR family transcriptional regulator Daci_1352 1506763 - 1507854 + | vanillate monooxygenase Daci_1353 1507953 - 1508426 + | MarR family transcriptional regulator TERM 1181 1508576 - 1508564 - f 74 -5.5 -4.49353 | TGAGAACACAAGAAA GCTCC CAC AGAGC TTCAACCCAAGGAGA TERM 1182 1508833 - 1508854 + G 72 -8.7 -3.97947 | gap 1, overlap 1508840 GTCGGCGCACTGGCA GCTCAGC-GG CGC CCAGCTGGGC TTTCTGCTCAGTGCG TERM 1183 1509364 - 1509419 + G 79 -14.5 -3.34398 | gap 1, overlap 1509396 1509400 GCCCACGCTGGGGGC GCTGCCGCCTGCCGCGCCCGCATCGG CGGGA CCGGCGCGG-CGGGGCCCGCTGCAGC TGTTTGCGCCGGGCC Daci_1354 1508681 - 1510033 + | major facilitator transporter Daci_1355 1510064 - 1511140 + | Rieske (2Fe-2S) domain-containing protein Daci_1356 1511173 - 1512135 + | phthalate 4,5-dioxygenase Daci_1357 1512242 - 1513189 + | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding Daci_1358 1513623 - 1513198 - | hypothetical protein Daci_1359 1513755 - 1514411 + | TetR family transcriptional regulator TERM 1184 1514505 - 1514533 + T 83 -17.5 -2.57683 | opp_overlap 1514510, overlap 1514510 GCAGGAGGATGGCAA AAAAAGGCCCCGC AGA GCGGGGCCTTTTG CTTCTACCGGAGTGT TERM 1185 1514528 - 1514510 - T 100 -17.4 -5.44721 | opp_overlap 1514505 1514510 AGGATGGCAAAAAAA GGCCCCGC AGA GCGGGGCC TTTTGCTTCTACCGG TERM 1186 1514510 - 1514528 + T 100 -17.4 -4.48987 | opp_overlap 1514510, overlap 1514505 AGGATGGCAAAAAAA GGCCCCGC AGA GCGGGGCC TTTTGCTTCTACCGG Daci_1360 1515611 - 1514568 - | TRAP dicarboxylate transporter, DctP subunit TERM 1187 1515159 - 1515180 + g 72 -8.6 -4.08216 | GCCGTTCTCGCCCCA GGCCAGCG GCACCA CGCCGGCC TTTTCCAGGCGCTGG Daci_1361 1516942 - 1515644 - | TRAP dicarboxylate transporter, DctM subunit Daci_1362 1517484 - 1516939 - | tripartite ATP-independent periplasmic transporter DctQ TERM 1188 1516994 - 1516972 - G 74 -14.8 -3.05384 | GGGGCTGTCATCGAA GGCGCCAGGG CGG CCCTGGCGCT GGAACAGCTGCAGCG TERM 1189 1518704 - 1518666 - g 71 -2.8 -4.59773 | overlap 1518667 1518668 1518677 GCCTACCGTGAAAAA CCCGCCAGCAAGGACGCG CCC CAGGGCGTGGCCGGCGCG CTGTGGAACTTCCTG Daci_1363 1517802 - 1518746 + | LysR family transcriptional regulator TERM 1190 1518792 - 1518776 - f 100 -9.4 -5.1861 | opp_overlap 1518776 CGCATCAGGAAAAAA GGGGCT CTCGC AGCCCC TTTTTGCTGCACGTT TERM 1191 1518776 - 1518792 + F 100 -9.4 -4.73388 | opp_overlap 1518776 CGCATCAGGAAAAAA GGGGCT CTCGC AGCCCC TTTTTGCTGCACGTT TERM 1192 1519015 - 1518999 - f 83 -4.4 -5.02074 | gap 1, opp_overlap 1519003, overlap 1519000 1519001 GGATCGGTCAAAAAA CGCGTGC CATG GCACG-G CAGTTGCTTACCTGA Daci_1364 1519190 - 1520089 + | extracellular solute-binding protein TERM 1193 1520105 - 1520135 + F 100 -11.9 -5.4833 | gap 1 GTACCAGCTGAATGC CGCCCCTTCT-GCC ATGC GGTTGGAAGGGGCG TTTTTTGTTGCGTCG Daci_1365 1520202 - 1520954 + | polar amino acid ABC transporter, inner membrane subunit Daci_1366 1520956 - 1521627 + | polar amino acid ABC transporter, inner membrane subunit TERM 1194 1521633 - 1521609 - f 72 -2.2 -4.82901 | gap 1, overlap 1521611 1521612 GCGCCTGCACAAAAA GAT-TGCCATC ATTC GATGACACACC ACCCCCTGAGTCGCT Daci_1367 1521778 - 1522515 + | ABC transporter related TERM 1195 1522550 - 1522576 + T 89 -13.1 -4.13014 | gap 1, opp_overlap 1522552 1522555 AGCAGGCCATCTCAA GAC-AAGGGCGC TTCG GCGCCCTTAGTC TTTTGCCGCTCTGGA TERM 1196 1522573 - 1522552 - T 72 -12.3 -3.06162 | opp_overlap 1522550, overlap 1522555 CAGGCCATCTCAAGA CAAGGGCGC TTCG GCGCCCTTA GTCTTTTGCCGCTCT TERM 1197 1522570 - 1522555 - T 77 -11.8 -3.67611 | opp_overlap 1522550, overlap 1522552 GCCATCTCAAGACAA GGGCGC TTCG GCGCCC TTAGTCTTTTGCCGC Daci_1368 1523515 - 1522571 - | RpiR family transcriptional regulator TERM 1198 1523466 - 1523494 + g 81 -7.4 -4.63527 | gap 1, overlap 1523452 TCCGCGCCCTGCTGC GCCAGGC-GCTGC GGCA GCAGCAGTGTGGC TTTTTGCAATGGTGA TERM 1199 1524140 - 1524083 - g 71 -10.3 -3.78775 | gap 1, opp_overlap 1524119, overlap 1524084 1524110 CGTGCGATGAGGAAA TCGGCTCGCCCGCCACGCGCCAGA-CCA TCA TGGATACGGTGCGCGGTGCGCGCGCCGT CTTCAACGCCGAGCC TERM 1200 1524119 - 1524139 + G 78 -16.1 -3.01712 | opp_overlap 1524084 1524083 1524110 AGACCATCATGGATA CGGTGCGCG GTG CGCGCGCCG TCTTCAACGCCGAGC Daci_1369 1523593 - 1524777 + | peptidase dimerisation domain-containing protein Daci_1370 1524792 - 1525808 + | hypothetical protein Daci_1371 1525885 - 1526913 + | hypothetical protein Daci_1372 1527927 - 1526938 - | hypothetical protein Daci_1373 1529232 - 1527979 - | beta-lactamase domain-containing protein TERM 1201 1528176 - 1528225 + g 74 -13.7 -3.37796 | gap 4, opp_overlap 1528163, overlap 1528179 CATGCAGGGCCAGCT GCCACTGGCCCGCGTCGGCCAGCGC CTGG GCGCTGGCC-AC-CAGGCC-G-GGC TTGTCGGTGATGGCC Daci_1374 1530566 - 1529229 - | hypothetical protein Daci_1375 1531960 - 1530563 - | hypothetical protein Daci_1376 1533007 - 1531985 - | hypothetical protein TERM 1202 1532056 - 1532039 - G 71 -2.5 -4.59773 | opp_overlap 1532052, overlap 1532040 1532041 CGCCACGGGCAAAAA GGCGGCG TAGG CGGCGCT GGCCTCGGCCGGGCT Daci_1377 1535121 - 1533004 - | CoA-binding domain-containing protein TERM 1203 1533706 - 1533728 + g 82 -13.4 -3.72576 | opp_overlap 1533719 GCTGCCTGCATCGGC CATCGCGGGC AAA GCCTGCGGTG TTTCATGCAGGCGGG Daci_1378 1536195 - 1535131 - | porin TERM 1204 1536489 - 1536538 + G 73 -15.8 -2.53263 | gap 1 GGGCCGCTACGAGCG CCACCAGCAGGTGCGCGCCGC CGACCCCAA GCGGCGCG-AGGTGCTGGTGG TGGCTTCGGGCTGCG Daci_1379 1536349 - 1537086 + | Crp/FNR family transcriptional regulator Daci_1380 1538032 - 1537103 - | LysR family transcriptional regulator Daci_1381 1538070 - 1539134 + | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding Daci_1382 1539158 - 1539853 + | dimethylmenaquinone methyltransferase TERM 1205 1540139 - 1540127 - g 73 -10.5 -3.92996 | GGTCATAGACAACAA GCCCG GCG CGGGC GGCAACATCGGCCTG Daci_1383 1539921 - 1540898 + | hypothetical protein Daci_1384 1540901 - 1542136 + | L-lactate dehydrogenase (cytochrome) Daci_1385 1542209 - 1543249 + | dihydroorotase Daci_1386 1543283 - 1544194 + | hypothetical protein TERM 1206 1544574 - 1544632 + G 93 -20.8 -3.13403 | opp_overlap 1544568, overlap 1544619 GGACGAGAACGGCGC CCTGCTGCTGGCGCCGGCCGCGCTGTGC GAG GCGCTGCGCCACCGGCGCTGGCACCAGC TCTTCGTGGAGCAGC Daci_1387 1544191 - 1545000 + | putative transmembrane protein Daci_1388 1544997 - 1545962 + | heat shock protein HtpX TERM 1207 1546049 - 1546094 + F 100 -11.3 -4.86731 | opp_overlap 1546049 AAGCCCCATCAGAAA TGCTTGTCCGGTGCTGCATTT ATGC GAATGTAGTAACGTACAAGCA TTTTCTTTGACGGAG Daci_1389 1546117 - 1546374 + | prevent-host-death family protein TERM 1208 1546557 - 1546533 - g 74 -12.9 -3.59979 | GGCGTGCAGTTGAAA GCCCGGCAA GACCCGG TTGCCGGGC AGGTGCTGCGCCGCT Daci_1390 1546374 - 1546799 + | PilT domain-containing protein TERM 1209 1546854 - 1546878 + F 100 -10.7 -4.9755 | opp_overlap 1546854 ACCCAGGCTTCACAA GCCCCTGTC AACAACC GGCAGGGGC TTTTTCGTTGTATCT Daci_1391 1546928 - 1547287 + | hypothetical protein Daci_1392 1548206 - 1547289 - | LysR family transcriptional regulator Daci_1393 1548481 - 1550598 + | 3-hydroxyacyl-CoA dehydrogenase NAD-binding Daci_1394 1550707 - 1551903 + | acetyl-CoA acetyltransferase Daci_1395 1552070 - 1553266 + | acyl-CoA dehydrogenase domain-containing protein TERM 1210 1553719 - 1553688 - g 78 -13.7 -3.66018 | CTACGAGCTCAACAA CGTCGCCACCACG GCCGTG CGCAGCGGCGACG GCTGGGTGCTGAACG TERM 1211 1553900 - 1553868 - g 75 -8.9 -4.19817 | overlap 1553880 CGCAGGCATCCAAAA GCGCGGCTACAACCG CAT CGAGGGCGGCCGCGC CGCCGAGCTGGTGCT Daci_1396 1553287 - 1554423 + | acyl-CoA dehydrogenase domain-containing protein Daci_1397 1554440 - 1555240 + | enoyl-CoA hydratase Daci_1398 1555283 - 1556539 + | L-carnitine dehydratase/bile acid-inducible protein F Daci_1399 1556658 - 1557677 + | hypothetical protein TERM 1212 1558007 - 1557979 - g 75 -10.1 -4.07568 | CGTGGTGGTGGAAAA CCGCCCTGGCGCC TCC GGCTCCATCGCGG CCGTGCAGGTCGCCA Daci_1400 1557743 - 1558756 + | hypothetical protein Daci_1401 1558764 - 1559738 + | 2-nitropropane dioxygenase NPD TERM 1213 1559795 - 1559809 + F 78 -10 -3.89957 | CGTGCTGCGCCCCAT GGCAAG CCG CTTGCC TTGTTCCTTCTTGCG Daci_1402 1559861 - 1560610 + | electron transfer flavoprotein alpha/beta-subunit Daci_1403 1560624 - 1561556 + | electron transfer flavoprotein alpha subunit TERM 1214 1561930 - 1561906 - g 71 -10.6 -3.7941 | CATCGTGGAGAACAA GCCCGGCGCG GGCGG CACGCTGGGC CCGGGCAACATGTCC Daci_1404 1561682 - 1562668 + | hypothetical protein Daci_1405 1562755 - 1564299 + | AMP-dependent synthetase and ligase Daci_1406 1564347 - 1565117 + | hypothetical protein Daci_1407 1565126 - 1566055 + | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding TERM 1215 1566074 - 1566093 + F 100 -9.2 -5.14563 | TTGTTTTCCATCCGA CGCTGCGC TGTT GCGTGGCG TTTTTTCATCGCCGG TERM 1216 1566147 - 1566127 - f 100 -13.9 -4.4261 | GCCCCAAGATGAAAA GCGGCCCCC TTG GGGGGCAGC GGACCTTGCGCAGCA TERM 1217 1566224 - 1566234 + G 71 -2.4 -4.62069 | CCATGCCTTCGACTT CCCG CCG CGGC TTTTTGCAATCGACC TERM 1218 1566412 - 1566402 - g 72 -8.2 -4.07568 | GGTCGGCCTGCAAAA GGCC CTG GGCC AGCCCGTCATCGTGG Daci_1408 1566211 - 1567206 + | hypothetical protein TERM 1219 1567288 - 1567313 + F 74 -6.7 -4.30719 | overlap 1567291 TTGTTTTTCGAGGCC GGGGTTCGGCC CGGC GGCCGACCTAC TTTCTTATCGCGCGA Daci_1409 1567455 - 1568084 + | integrase, catalytic region Daci_1410 1568126 - 1568569 + | transposase IS3/IS911 family protein Daci_1411 1568545 - 1568895 + | IS66 Orf2 family protein Daci_1412 1568997 - 1570592 + | transposase IS66 Daci_1413 1571339 - 1570626 - | yecA family protein Daci_1414 1571414 - 1572070 + | transposase TERM 1220 1572263 - 1572238 - T 78 -14.1 -3.25491 | gap 1, overlap 1572242 AAGTCAGATGACGAA GCAAGCCTGTCC TTC GG-CAGGCTTGC CACCCCGCATCCCGC TERM 1221 1572373 - 1572333 - T 100 -14.2 -4.74706 | gap 1, opp_overlap 1572339, overlap 1572339 GCCAACAGCCAAAAA TACAAACAGCCGATGCGCA TTGG TGCGC-TCGGCTGTTTTCA TGGAGTTTGGTGCGG TERM 1222 1572339 - 1572367 + T 100 -15.4 -4.29432 | gap 1, opp_overlap 1572333 1572339 AGCCAAAAATACAAA CAGCCGATGCGCA TTGG TGCGC-TCGGCTG TTTTCATGGAGTTTG TERM 1223 1572367 - 1572339 - T 100 -15.4 -4.56791 | gap 1, opp_overlap 1572339, overlap 1572333 AGCCAAAAATACAAA CAGCCGATGCGCA TTGG TGCGC-TCGGCTG TTTTCATGGAGTTTG Daci_1415 1572660 - 1572391 - | hypothetical protein Daci_1416 1574156 - 1573137 - | AraC family transcriptional regulator Daci_1417 1574253 - 1575629 + | amidohydrolase Daci_1418 1576365 - 1575796 - | hypothetical protein TERM 1224 1576175 - 1576141 - G 71 -10.7 -3.60296 | CACGGCCACGGCAAA GCCCAC-CCAGGCCACG CGC CG-GGCCTGCTGCGGGC CGAAGCTGCGGTTGA Daci_1419 1578146 - 1576362 - | FAD dependent oxidoreductase TERM 1225 1578412 - 1578389 - H 80 -3.8 -5.08824 | overlap 1578393 GGGCGACGGAAAAAA CGAATGCCAT ATTA ATGGCATGCT AATCAATTAGGAGTG TERM 1226 1578953 - 1578967 + G 82 -3.4 -5.0538 | GGGTCAAGGCGCGGA CCATCG TGG CGGAGG TTTTTTCCGCTGCGC Daci_1420 1578634 - 1580649 + | filamentous haemagglutinin outer membrane protein Daci_1421 1580655 - 1582352 + | polypeptide-transport-associated domain-containing protein TERM 1227 1582523 - 1582497 - f 74 -12.2 -3.14132 | overlap 1582504 CCTGTGCCCGAGGAA CCGAGAACCGCG TAC CGCGCCCCTCGG TGGGCCCGGCGCACA TERM 1228 1582537 - 1582557 + G 84 -9.7 -4.431 | opp_overlap 1582504, overlap 1582530 GGTGGGCCCGGCGCA CAGCGGC GTTCATG GCCGCTG TTTTCTGGCTGACTC TERM 1229 1583149 - 1583112 - g 91 -3.3 -5.48825 | gap 1, overlap 1583114 1583116 1583145 CAGGATGCAAAAAAA CAGGGCTTCGACGTGACC GGT GGCCGCATCGAAGTGC-G CGGCTCGGGCATCGA TERM 1230 1583148 - 1583114 - g 76 -7 -4.37763 | overlap 1583112 1583116 1583145 GGATGCAAAAAAACA GGGCTTCGACGTGACC GGT GGCCGCATCGAAGTGC GCGGCTCGGGCATCG TERM 1231 1583844 - 1583810 - g 78 -5.7 -4.56775 | gap 2 ACTGGGTGGCAAAAA CGTCCACCAGACCGGCA AGC TGCTGGTG-GGTGG-CG ACCTGGCCATCGACG Daci_1422 1582523 - 1584121 + | LigA Daci_1423 1586588 - 1584984 - | hypothetical protein TERM 1232 1588314 - 1588286 - g 71 -10.9 -3.65046 | CTGGGAGGGCAAGAA CGCCGACGGGGAC ATC GTCACCGTCGAAG GCCTGGCCCGCAGCG TERM 1233 1589297 - 1589283 - g 72 -6.4 -4.33819 | overlap 1589286 AGCACGCACAAGAAA GAGGAC CAG ATCCTC GTCACCCATCACTAC TERM 1234 1590739 - 1590719 - g 82 -8.3 -4.4017 | opp_overlap 1590708 GGAAGCGGCAGAAAA CCGCTTTGC CGA GCAAAACAG CCAAAGCAGCAGCTC Daci_1424 1586619 - 1592804 + | adhesin Daci_1425 1593263 - 1593712 + | hypothetical protein Daci_1426 1593939 - 1594193 + | hypothetical protein TERM 1235 1594306 - 1594320 + G 71 -2.9 -4.53036 | overlap 1594300 AGAAAATCCGTTCAG TAGAA CTATT TTCTA TTTTGATGTTTCTGG Daci_1427 1594235 - 1594600 + | hypothetical protein Daci_1428 1595100 - 1595504 + | putative transmembrane protein Daci_1429 1596010 - 1596273 + | hypothetical protein TERM 1236 1596412 - 1596400 - g 77 -3.4 -4.76041 | opp_overlap 1596400, overlap 1596385 GATATTTACGAAAAA TACC CGAAC GGTA TTTTAGATTTCGATG Daci_1430 1596307 - 1596621 + | hypothetical protein Daci_1431 1597126 - 1597536 + | hypothetical protein Daci_1432 1597635 - 1598015 + | hypothetical protein Daci_1433 1598163 - 1599881 + | 2-alkenal reductase TERM 1237 1600872 - 1600886 + G 82 -4.2 -5.0916 | CGATAGCCGGCCTGA TCGTGG TGG CTGCGA TTTTTGTGTTCCGCA Daci_1434 1599884 - 1601584 + | heat shock protein DnaJ domain-containing protein Daci_1435 1601817 - 1603805 + | gamma-glutamyltransferase TERM 1238 1603828 - 1603865 + F 93 -11.3 -4.40358 | overlap 1603833 CTGATGATTGACTGA GGAAGGCGCTGCTGGCA GGGA TGCTGGTGGCGCTTTTC TTTTATGGGGTCCAT TERM 1239 1603833 - 1603860 + F 100 -9.8 -5.18371 | overlap 1603828 GATTGACTGAGGAAG GCGCTGCTGGCA GGGA TGCTGGTGGCGC TTTTCTTTTATGGGG TERM 1240 1604842 - 1604872 + G 71 -11 -3.54424 | overlap 1604847 CAAGCTGCGCGCCCT GGCCTCGGCCTCCG AGG TGCGGCCCGAGGCC TTTGCCAACGTGCCC Daci_1436 1604189 - 1605145 + | hypothetical protein Daci_1437 1606584 - 1605151 - | fumarate hydratase Daci_1438 1607581 - 1606589 - | hypothetical protein Daci_1439 1609008 - 1607626 - | 3-carboxy-cis,cis-muconate cycloisomerase TERM 1241 1608399 - 1608441 + g 77 -15.5 -3.14344 | gap 1 GCGAGGCCAGCGTGC CTGCCGCCCCCGCGAACTGG CCCA CCAGCACGCGCGGGC-GCAG TTCCTGCAGGCGCTG TERM 1242 1608752 - 1608764 + g 70 -9.1 -3.90112 | GGCAGGATGGGGTAG CCGAC AAT GTCGG TTTCCTTGCGCAGCA Daci_1440 1609106 - 1609852 + | GntR family transcriptional regulator Daci_1441 1611705 - 1609849 - | ABC transporter related TERM 1243 1611658 - 1611637 - G 76 -2.8 -4.67904 | GATGAAGGCGAAAAA GCCCTTGG GCGGGA CCGTGGGC TCGACGCTGGGATAG TERM 1244 1611674 - 1611684 + g 71 -2.4 -4.56597 | TCGACGCTGGGATAG GGCG GAA CGCG TTTTTCAAAGAAACC TERM 1245 1611950 - 1611965 + r 78 -10.4 -3.87323 | opp_overlap 1611950 GGCGGCAACAAAAAA GGCCTC TTGC GAGGCC TTGTGTTTCATGCTG TERM 1246 1611965 - 1611950 - R 100 -10.4 -5.4505 | opp_overlap 1611950 GGCGGCAACAAAAAA GGCCTC TTGC GAGGCC TTGTGTTTCATGCTG Daci_1442 1612930 - 1612013 - | cysteine synthase TERM 1247 1614001 - 1613961 - g 78 -18.1 -2.70932 | overlap 1613936 CTTTGCGCTGAACCA CGGCCAGGCCGTGGCGCGG CTG CCGGGCAGCGGCCTGGGCG GCTAGGCCCGAGGCC Daci_1443 1613071 - 1614006 + | LysR family transcriptional regulator Daci_1444 1615397 - 1614027 - | amidase TERM 1248 1614733 - 1614695 - G 77 -17.5 -2.62184 | gap 1, overlap 1614717 GCTCGCCGGAGAGGA TGGCATCCAGCGTGGCGC AACA GCGC-ACGCTGGGCGCCA GCGGGCCGATGGAGT Daci_1445 1616125 - 1615448 - | hypothetical protein TERM 1249 1616166 - 1616146 - R 75 -8.1 -4.19817 | overlap 1616147 GCGATCCAGGGAAAA GGCGGGGCC GCA GGCCCCGGT GGGAAAGAGGAGGGG Daci_1446 1617532 - 1616213 - | major facilitator transporter TERM 1250 1617600 - 1617648 + r 78 -13.9 -3.19602 | gap 1, overlap 1617598 CCGTGTGTCTCAGGG GCTTCAGGCGCT-GGCGGGTCT GCAGTG GGACCGGCCGGGCGTCTGGAGC TGTTCCTGTGGCGGC Daci_1447 1618705 - 1617806 - | hypothetical protein Daci_1448 1618907 - 1619680 + | AraC family transcriptional regulator TERM 1251 1620179 - 1620199 + T 100 -18.3 -4.25848 | TCACACTTTCTTCCA TGCCCCGCC ACC GGCGGGGCA TTTTCATGGGCGGTT Daci_1449 1622682 - 1620214 - | TonB-dependent siderophore receptor TERM 1252 1620890 - 1620878 - G 70 -3.3 -4.46155 | GAGACATCCAGAAAA TCCTG CGG CCGGA AGATGCTGGTGTAGC Daci_1450 1624159 - 1622837 - | anti-FecI sigma factor, FecR Daci_1451 1624998 - 1624255 - | RNA-binding S4 domain-containing protein Daci_1452 1626722 - 1625052 - | beta-lactamase domain-containing protein TERM 1253 1625170 - 1625183 + g 72 -3.7 -4.65895 | overlap 1625162 ACCCAGTCCTGCACG CTGCC GTCG GGCTG TTTTTGCATGGCGGC Daci_1453 1626838 - 1627698 + | diaminopimelate epimerase Daci_1454 1627695 - 1628408 + | hypothetical protein Daci_1455 1628423 - 1629520 + | integrase family protein Daci_1456 1629616 - 1630770 + | cobalamin synthesis protein P47K TERM 1254 1630861 - 1630826 - f 95 -20.4 -2.74563 | opp_overlap 1630830, overlap 1630830 CTGACATCTGAATGA CACAGGGGCCGCCCGC ATGC GTGGGCGGCCCCTTTG CATTCCTGTGGGGTA TERM 1255 1630857 - 1630830 - f 90 -19.8 -3.00774 | opp_overlap 1630830, overlap 1630826 CATCTGAATGACACA GGGGCCGCCCGC ATGC GTGGGCGGCCCC TTTGCATTCCTGTGG TERM 1256 1630830 - 1630857 + F 100 -22 -3.79787 | opp_overlap 1630826 1630830 CATCTGAATGACACA GGGGCCGCCCGC ATGC GTGGGCGGCCCC TTTGCATTCCTGTGG TERM 1257 1631070 - 1631086 + F 72 -13.7 -2.67209 | opp_overlap 1631052 1631053 CGCGGTCCGCACTGC GGTCGGC GTT GCCGACC TGGTGTCCCTTGCTG Daci_1457 1631302 - 1631796 + | TraR/DksA family transcriptional regulator Daci_1458 1631842 - 1633623 + | hypothetical protein TERM 1258 1633994 - 1633975 - g 73 -7.8 -4.14392 | GGCCAAGCTGGAAAA GCACCAGG GTCA CCTGACGC GCGCAGCCATCGAGC Daci_1459 1633748 - 1634293 + | ATP-dependent protease peptidase subunit TERM 1259 1634793 - 1634767 - g 71 -10 -3.7732 | opp_overlap 1634788, overlap 1634788 GGCTGACATGAAGAA GCTGCGCCTGCG CGC CGAAGACGCGGC CGAGGACCGCATCCT TERM 1260 1635040 - 1635028 - g 72 -6.9 -4.2558 | overlap 1635036 CATGGGCCAGGAAAA GCGCA AGA CGCGC AAGCTGCGCATTGCC Daci_1460 1634393 - 1635730 + | ATP-dependent protease ATP-binding subunit TERM 1261 1635760 - 1635733 - f 86 -13.4 -3.54424 | gap 1 CTTCATCCTCTGAAA CGG-GCCGGCTGC CGC GCAGCCGCCACCG AAGTGACTGCCCGCA TERM 1262 1635763 - 1635790 + F 100 -17.1 -4.83169 | opp_overlap 1635763 GCAGCCGCCACCGAA GTGACTGCCCG CATTGC CGGGCAGTCAC TTTTTGTAGGAGGGT TERM 1263 1635790 - 1635763 - f 87 -17.1 -3.05816 | opp_overlap 1635763 GCAGCCGCCACCGAA GTGACTGCCCG CATTGC CGGGCAGTCAC TTTTTGTAGGAGGGT Daci_1461 1636099 - 1636527 + | cell division protein MraZ TERM 1264 1636748 - 1636766 + G 100 -14.6 -4.74103 | opp_overlap 1636741 CGATCGAAGAGGCAG CGCGCATC ACC GATGCGCG TTTTTCGATTCGGCA Daci_1462 1636543 - 1637472 + | S-adenosyl-methyltransferase MraW TERM 1265 1637713 - 1637671 - g 86 -12.4 -4.11216 | CCTGCAGGTGGAAAA GCGCGCCCAGGCCACGCCGC AGC GCATCGAGGTCATGGCGCGC GAGCGCCTGCAGATG TERM 1266 1637745 - 1637731 - g 70 -12.8 -3.25823 | GCGCCTGCAGATGAA GCCGGC CAC GCCGGC CATCGCCCAGTACGT Daci_1463 1637510 - 1637794 + | cell division protein FtsL Daci_1464 1637791 - 1639539 + | peptidoglycan glycosyltransferase TERM 1267 1639759 - 1639771 + G 72 -4.1 -4.56597 | overlap 1639760 TCGAAGCGCAGGGTG TCGAA GCC TTCGG TTTTTCCGGCGAGCA Daci_1465 1639536 - 1641065 + | UDP-N-acetylmuramyl-tripeptide synthetase Daci_1466 1641062 - 1642477 + | UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase Daci_1467 1642468 - 1643646 + | phospho-N-acetylmuramoyl-pentapeptide-transferase TERM 1268 1644904 - 1644850 - g 73 -7 -4.14392 | gap 1 GGGCAAGCGCCAAAA GCCCCAGCAGCGCGCCCACATCACC TTCGGC GGCGACATGC-CGCGCCGCCCCGGC GACTTCGGCCTGGAA Daci_1468 1643651 - 1645603 + | UDP-N-acetylmuramoylalanine--D-glutamate ligase Daci_1469 1645600 - 1646865 + | cell division protein FtsW TERM 1269 1647084 - 1647107 + G 81 -7.4 -4.59773 | gap 1 TTCTCGGGCGTGCGC GGCAAGGG-CA TCA TGACCCTGGCC TTTTTGCCCATGCGC TERM 1270 1647872 - 1647851 - g 70 -3.7 -4.44974 | gap 1, overlap 1647842 1647853 1647854 CGAAATGCTACAAAA TATGCAGCGT GCG ACGCTGC-TG GAGCGCGCTGGAAAA TERM 1271 1647871 - 1647853 - g 70 -8.8 -3.82551 | overlap 1647842 1647851 1647854 AAATGCTACAAAATA TGCAGCGT GCG ACGCTGCT GGAGCGCGCTGGAAA Daci_1470 1646862 - 1647956 + | UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase TERM 1272 1649167 - 1649221 + G 73 -10 -3.86194 | gap 4, overlap 1649170 GCCCGTGGTGGCGGC CGACGGC-CG-CTC-GCTGG-CACGCGC CCT GCGCGTGGCCGGCCGTGTCGAGCCGGTG TTTGTGGAAAACGTT Daci_1471 1647953 - 1649386 + | UDP-N-acetylmuramate--L-alanine ligase Daci_1472 1649383 - 1650363 + | D-alanine--D-alanine ligase TERM 1273 1650557 - 1650533 - g 78 -12.1 -3.78934 | overlap 1650535 GCTGGTGCACAACAA CACGGTGACGC TGC GCGCCAACGTG GCGCCCGTGCTCACC Daci_1473 1650360 - 1651160 + | polypeptide-transport-associated domain-containing protein Daci_1474 1651245 - 1652474 + | cell division protein FtsA Daci_1475 1652594 - 1653832 + | cell division protein FtsZ TERM 1274 1653867 - 1653910 + F 93 -17.4 -3.32844 | gap 1, opp_overlap 1653874, overlap 1653868 CTGCATAGCCGTGAT AGCGAAAGCCGTGC-CAGGGC CAT GCCCTGCGCACGGCTGCCGCG TTCTAAAATAGCCGG TERM 1275 1653868 - 1653909 + F 95 -20.9 -2.59564 | gap 1, opp_overlap 1653874, overlap 1653867 TGCATAGCCGTGATA GCGAAAGCCGTGC-CAGGGC CAT GCCCTGCGCACGGCTGCCGC GTTCTAAAATAGCCG TERM 1276 1653903 - 1653874 - f 100 -20.1 -3.70902 | gap 1, opp_overlap 1653868 1653867 GCCGTGATAGCGAAA GCCGTGC-CAGGGC CAT GCCCTGCGCACGGC TGCCGCGTTCTAAAA Daci_1476 1653926 - 1654849 + | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase Daci_1477 1654863 - 1655039 + | hypothetical protein TERM 1277 1655171 - 1655184 + F 74 -5.3 -4.49644 | GCTGTCCTATTTATC GATTC TCAT GAATC TTTTAGCTTTTTGGT TERM 1278 1655667 - 1655693 + G 76 -2.2 -4.7254 | opp_overlap 1655667, overlap 1655669 ACGCCGAGGACTATA TTCGGCTAATGA ATA TCACTAGGCGTA TTTTTGGTGAACCGT Daci_1478 1655435 - 1656742 + | coproporphyrinogen dehydrogenase TERM 1279 1656832 - 1656847 + G 72 -4.6 -4.4009 | overlap 1656827 GGGGCCAGTGGTGGC CGTGAC GCAT GGCACG TTTTCTAACGTCACG Daci_1479 1656749 - 1657678 + | alpha/beta hydrolase fold Daci_1480 1658202 - 1657654 - | crossover junction endodeoxyribonuclease RuvC TERM 1280 1657851 - 1657870 + g 84 -7.8 -4.8048 | GGCTCTTGGCCGCGC GGCCGTGG CCGG TCATGGCC TTTTTCATCTGCAGC Daci_1481 1658936 - 1658220 - | monofunctional biosynthetic peptidoglycan transglycosylase Daci_1482 1659801 - 1658944 - | shikimate 5-dehydrogenase Daci_1483 1660703 - 1659840 - | TonB family protein TERM 1281 1660236 - 1660263 + g 88 -12.1 -4.30576 | gap 1, overlap 1660236 1660237 GCGCTTTTCGATCTC G-GCCAGCAGCT TGACC AGCTGCTGGCGC TTTTCCTGCTGGGCC TERM 1282 1660237 - 1660261 + g 73 -15.8 -2.50493 | overlap 1660236 1660236 CGCTTTTCGATCTCG GCCAGCAGCT TGACC AGCTGCTGGC GCTTTTCCTGCTGGG Daci_1484 1662818 - 1660740 - | ribonuclease II TERM 1283 1662368 - 1662405 + g 89 -2.7 -5.27206 | gap 2, overlap 1662357 1662372 ATTCGCCGGCGCCCA GCTG-TTC-GGCCCAGG CAGTGA TCTGGGCCTGGATCTGC TTTTTCTTCTCTATG Daci_1485 1663458 - 1662874 - | hypothetical protein TERM 1284 1663710 - 1663727 + G 86 -14.1 -3.83154 | CTCTGGCAACGTGTT GCCCCGC TGCT GCGGGGC TTTGACTTCTGGTTG Daci_1486 1663671 - 1664840 + | rod shape-determining protein RodA TERM 1285 1665077 - 1665117 + F 100 -14.7 -5.31456 | opp_overlap 1665085, overlap 1665080 CACGCGGATGCATGC CTACGGAATGCCGCTCAGC CTG GTGGAGCGGCATTCCGTTC TTTTTTGTGGGTTGG TERM 1286 1665080 - 1665114 + F 100 -20.8 -4.73105 | opp_overlap 1665085, overlap 1665077 GCGGATGCATGCCTA CGGAATGCCGCTCAGC CTG GTGGAGCGGCATTCCG TTCTTTTTTGTGGGT TERM 1287 1665805 - 1665855 + G 74 -13.8 -3.34398 | opp_overlap 1665805, overlap 1665803 1665831 ATCGCCGAGCAAAAG GGCCGGCGTGAGGTGGGCTCTGCC GGC GGCGGTGGCCGTTTCGGGCTGGCC TATTTCAGCGACGAG Daci_1487 1665193 - 1666653 + | peptidase U62 modulator of DNA gyrase TERM 1288 1667011 - 1667028 + F 82 -11.3 -3.86015 | CAGCTTGACCTGGCG GTGCTGG ACCA CCAGCAC TTTCTCACCACGCTG TERM 1289 1667509 - 1667523 + F 85 -3.6 -5.4387 | TAGAAAAAAGCAGTT TTATTG CGT CAATGA TTTTTTGCTTTCTCT TERM 1290 1667714 - 1667738 + F 100 -7.8 -5.93252 | gap 1, opp_overlap 1667714 AAACCTCCCTCAAAA CCGCCGAAGCT GTAA AGCC-CGGCGG TTTTTTGTTTTTCCC TERM 1291 1667738 - 1667714 - f 80 -10 -4.0896 | gap 1, opp_overlap 1667714 AAACCTCCCTCAAAA CCGCCGAAGCT GTAA AGCC-CGGCGG TTTTTTGTTTTTCCC Daci_1488 1667808 - 1668965 + | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 1292 1669002 - 1668975 - T 89 -12.8 -4.11216 | opp_overlap 1668980, overlap 1668980 GCCTGAGCCGGAAAA GAAAACGGGGCA GGCA TGCCCCGTTTTT TCCATGTCCCGGTTT TERM 1293 1668997 - 1668980 - T 100 -12.7 -5.08255 | opp_overlap 1668980, overlap 1668975 AGCCGGAAAAGAAAA CGGGGCA GGCA TGCCCCG TTTTTTCCATGTCCC TERM 1294 1668980 - 1668997 + T 100 -12.7 -5.1287 | opp_overlap 1668980 1668975 AGCCGGAAAAGAAAA CGGGGCA GGCA TGCCCCG TTTTTTCCATGTCCC Daci_1489 1669422 - 1669024 - | hypothetical protein Daci_1490 1669652 - 1669969 + | hypothetical protein TERM 1295 1669996 - 1670020 + T 91 -13.6 -3.90588 | opp_overlap 1669996 1669999, overlap 1669999 TAGCGATACAGCAAA GAAGCCTGGG CATGA CCCGGGCTTC TTTCATTGGGGGCTG TERM 1296 1670020 - 1669996 - T 86 -12.1 -3.89212 | opp_overlap 1669996 1669999, overlap 1669999 TAGCGATACAGCAAA GAAGCCTGGGC ATG ACCCGGGCTTC TTTCATTGGGGGCTG TERM 1297 1669999 - 1670017 + T 76 -9.5 -4.0825 | opp_overlap 1669996 1669999, overlap 1669996 CGATACAGCAAAGAA GCCTGGG CATGA CCCGGGC TTCTTTCATTGGGGG TERM 1298 1670017 - 1669999 - T 71 -8 -4.06993 | opp_overlap 1669999 1669996, overlap 1669996 CGATACAGCAAAGAA GCCTGGGC ATG ACCCGGGC TTCTTTCATTGGGGG Daci_1491 1671483 - 1670044 - | UDP-N-acetylmuramate TERM 1299 1670799 - 1670854 + g 71 -11.1 -3.61398 | overlap 1670800 GCACGAGATGGTGGA ACTGGCGTTCGATGGCGCCGAGGTC CTCGAA GATGTCGGCGTGGTCGAACTCCAGG TTGTTGAGCACGGCC TERM 1300 1670800 - 1670853 + g 70 -14.6 -2.76696 | overlap 1670799 CACGAGATGGTGGAA CTGGCGTTCGATGGCGCCGAGGTC CTCGAA GATGTCGGCGTGGTCGAACTCCAG GTTGTTGAGCACGGC TERM 1301 1671668 - 1671691 + H 73 -10.2 -3.66896 | opp_overlap 1671663 1671662 GGGTCACAATGGCCC GGGGCCCTCC GCAG GGAAGGCCTC TTATATATATGTAGG TERM 1302 1672264 - 1672300 + GH 76 -13.7 -3.06183 | gap 1, overlap 1672266 CGACGGCCAGGGGCG CAGCCCGCGCGGCAGC GCCGAG GC-GCTGCGCAGGCTG TTGGATCAGGATGAA Daci_1492 1671773 - 1672336 + | hypothetical protein Daci_1493 1672311 - 1672883 + | redoxin domain-containing protein Daci_1494 1673029 - 1673493 + | acetyl-CoA carboxylase, biotin carboxyl carrier protein Daci_1495 1673626 - 1674990 + | acetyl-CoA carboxylase, biotin carboxylase TERM 1303 1675015 - 1675042 + F 100 -17 -4.67942 | CCGATTGACCCTGCA TGCTGGCCCCCG GCGA CGGCGGCCAGCA TTTTCATTTATTGCA Daci_1496 1675075 - 1675965 + | ribosomal protein L11 methyltransferase TERM 1304 1677431 - 1677454 + G 89 -3 -5.28176 | gap 1, overlap 1677418 1677415 AAGGCCTGGAGGCGG CCGTGGC-CGG CTA TCGCGCCCTGG TTTTTTATCCCTGAA Daci_1497 1676041 - 1677468 + | Zinc finger-domain-containing protein TERM 1305 1678266 - 1678284 + G 74 -14.6 -3.04144 | ACGGGATGTGGCGAT GCATGGCG TGG CGCCATGC TGTTCGGCCTGGAGC Daci_1498 1677504 - 1678406 + | ribokinase-like domain-containing protein TERM 1306 1678478 - 1678457 - T 100 -13.7 -5.32944 | opp_overlap 1678457 TTCACAATGAAAAAA GCCCGACTC CAAA GAGCCGGGC TTTTTGCTTTGAGAC TERM 1307 1678457 - 1678478 + T 100 -11.5 -4.98531 | opp_overlap 1678457 TTCACAATGAAAAAA GCCCGACTC CAAA GAGCCGGGC TTTTTGCTTTGAGAC Daci_1499 1679460 - 1678504 - | hypothetical protein TERM 1308 1678600 - 1678624 + g 71 -11.3 -3.61398 | overlap 1678598 1678612 1678613 1678616 GGGAGCTGCAGGCGC GGCAGCGGCGG GAG CTGCTGCGGCC TTCTTGGGGGCAGCG TERM 1309 1679343 - 1679360 + g 75 -4.7 -4.6635 | overlap 1679334 1679332 1679355 TCTTGACGGGTGCTG CCTTGGC AGTG GCCGTGG TTTTCTTCACGGTTT TERM 1310 1679516 - 1679490 - R 71 -5.8 -4.38712 | TTGATTTGCACAAAA CACTTCGGGG TACGGGG CTCCGAAGCG ATCCAAAGCGATGTG Daci_1500 1680729 - 1679638 - | ribonucleotide-diphosphate reductase subunit beta TERM 1311 1680885 - 1680935 + r 85 -16.2 -3.14881 | gap 3 CGCATGGCGCTGGCT GGCGGGCAGGGCGCGGGGCCTGCGC CGTG GCG-AGGCCCCGCG--CTGCGCGGC TTACTGGCAGGCTTC Daci_1501 1683857 - 1680936 - | ribonucleotide-diphosphate reductase subunit alpha TERM 1312 1683408 - 1683453 + g 72 -6.5 -4.25283 | overlap 1683408 GGTCACATGCAGCAC GGGCGCCGGTGCGGCGGCAGC AGCG GCAGCGGCCTCGGCGGCCTTC TTTTGCTCGGCACGT TERM 1313 1683408 - 1683450 + g 88 -12.4 -4.25256 | overlap 1683408 GGTCACATGCAGCAC GGGCGCCGGTGCGGCGGCAG CAG CGGCAGCGGCCTCGGCGGCC TTCTTTTGCTCGGCA TERM 1314 1684183 - 1684125 - R 76 -10.2 -3.84648 | gap 3, opp_overlap 1684128, overlap 1684117 1684120 1684126 GCCAATAGCAGCAAA GGCCCGCTGC-GCCGTGGCTTGCGGGCGA TGGT CCGC-CGCAAGCCGCGGCAGCCTTGG-CC CTGCGCCGGTCGGAC TERM 1315 1684261 - 1684298 + r 73 -9.1 -3.97368 | gap 1, opp_overlap 1684258 GTAAAAAATGATCAG GCAGTCGGTG-CGTGCGC CGG GCGCGCCACATCGGTTGC TTTCTGGATTGACAG Daci_1502 1685023 - 1684388 - | N-acetyl-anhydromuranmyl-L-alanine amidase Daci_1503 1686551 - 1685010 - | two component, sigma54 specific, Fis family transcriptional regulator TERM 1316 1686168 - 1686127 - G 72 -13.5 -3.15999 | GCGGGAGAGACCGAA GGGCTGCGCGCCGGCATCA CCCC CGGGGCCGGCACACCGCCC ACGCCCTGGGCGGCC Daci_1504 1688314 - 1686551 - | histidine kinase TERM 1317 1687369 - 1687337 - G 77 -11.9 -3.86015 | overlap 1687339 1687342 CAGGTCGTGCAGAAA GACCACGCACAGCTG CTG CAGCAGTGCGGGCTC GGCCGCGTCGGCGGC TERM 1318 1687366 - 1687339 - G 73 -12 -3.51934 | gap 1, overlap 1687337 1687342 GGTCGTGCAGAAAGA CCACGCACAGCTG CTG CAGCAGTGCG-GG CTCGGCCGCGTCGGC Daci_1505 1688577 - 1688317 - | hypothetical protein Daci_1506 1689389 - 1688574 - | cytochrome c assembly protein Daci_1507 1690399 - 1689473 - | response regulator receiver modulated diguanylate cyclase Daci_1508 1694303 - 1690392 - | multi-sensor hybrid histidine kinase TERM 1319 1691921 - 1691973 + g 82 -15 -3.41051 | opp_overlap 1691958, overlap 1691914 1691913 CCATGGCGGCCAGCG CCTCGCGC-GCGCTGGCGTTGTCATC GAC GATGAGAACGCCGGTGCTGCCC-AGG TTGTCGTGGCCGTCC TERM 1320 1692619 - 1692643 + g 70 -15.7 -2.78384 | ACCTTCTCCAGGTAG CCGCGCTGGCG CGA TGTCAGCGCGG TCTGCTGCACCAGGC TERM 1321 1694271 - 1694257 - G 79 -2.8 -4.95302 | TCAAACAGAAGAAAA CCGT CGGGCAC ACGG TCCAGGAACTGGCGA Daci_1509 1694561 - 1695955 + | signal recognition particle protein TERM 1322 1696000 - 1696019 + F 100 -10.7 -5.07652 | GCTGTTTCCCGCCAA GCCGCAG CGCAGC CTGCGGC TTTTCTTTTGGCCGC Daci_1510 1696062 - 1696616 + | NLP/P60 protein Daci_1511 1696697 - 1697101 + | hypothetical protein Daci_1512 1697824 - 1697150 - | hypothetical protein Daci_1513 1699092 - 1697821 - | hypothetical protein TERM 1323 1698517 - 1698557 + g 74 -14 -3.28712 | opp_overlap 1698492 1698494 GCCACGCAGCAGCGG GCGCACGGC-GCCGGGCCGG TGC TCGGCCCAGCCGCTGT-CGC TTCTCCGGGCGAAGG Daci_1514 1701470 - 1699086 - | hypothetical protein TERM 1324 1701532 - 1701516 - R 100 -15.1 -5.1287 | opp_overlap 1701516 GTTACATGCAAAAAA GCCCGGC ATT GCCGGGC TTTGGTTACGCAGGA TERM 1325 1701516 - 1701532 + r 93 -15.1 -3.90112 | opp_overlap 1701516 GTTACATGCAAAAAA GCCCGGC ATT GCCGGGC TTTGGTTACGCAGGA Daci_1515 1702906 - 1701578 - | tRNA-i(6)A37 thiotransferase enzyme MiaB TERM 1326 1703008 - 1702959 - R 100 -9.8 -5.00616 | gap 1, overlap 1702963 1702964 GCGGTCTGCAAAAAA TGAAGGTGGCTCGGCCAGGGGGC GGCGT GCCCCATGGCCGGGCCG-CTGCG CCCCGCAAGGCGCGG TERM 1327 1703005 - 1702963 - R 95 -16.1 -3.93166 | overlap 1702959 1702964 TCTGCAAAAAATGAA GGTGGCTCGGCCAGGGGGC GGCGT GCCCCATGGCCGGGCCGCT GCGCCCCGCAAGGCG TERM 1328 1703004 - 1702964 - R 88 -19.6 -2.95177 | overlap 1702963 1702959 CTGCAAAAAATGAAG GTGGCTCGGCCAGGGGGC GGCGT GCCCCATGGCCGGGCCGC TGCGCCCCGCAAGGC Daci_1516 1703481 - 1703074 - | hypothetical protein Daci_1517 1704478 - 1703546 - | formate dehydrogenase family accessory protein FdhD Daci_1518 1705661 - 1704531 - | molybdate ABC transporter, ATPase subunit Daci_1519 1706338 - 1705658 - | molybdate ABC transporter, inner membrane subunit TERM 1329 1706167 - 1706151 - G 76 -2.1 -4.68994 | ACCAGCAGGTAAAAA CCGATCA CCG TGGGCGG AAGCACCAGGGGCAG TERM 1330 1706438 - 1706392 - R 100 -26.7 -3.22388 | gap 2 CACTCAACGCACGAA GCCGGCGCG-GCCCG-GCTCAGC GAC GCTGAGCACGGGCCCGTGCCGGC CGACCCCTCCCCAGG Daci_1520 1707308 - 1706490 - | molybdenum ABC transporter, periplasmic molybdate-binding protein TERM 1331 1707304 - 1707322 + g 82 -8.8 -4.4078 | opp_overlap 1707303 AACGACCTGAAAATG CGCATGCA GGG TGCAGGCG TTTTGCTTGGCGGGA TERM 1332 1707886 - 1707869 - g 73 -7.7 -4.21974 | gap 1, overlap 1707870 GCATCACCGAAGAAA GCGCCCAG TTG CTGGGC-C TGGCGCCGGGCCTGC Daci_1521 1707346 - 1708182 + | ModE family transcriptional regulator TERM 1333 1708317 - 1708341 + F 71 -5.6 -4.36914 | gap 1, opp_overlap 1708318, overlap 1708318 TTGCGCCGCTGTGAA ACCTGCG-CGC TCTG GCGGCGCGGGC TTTTCTGGCGACCGA Daci_1522 1708382 - 1708657 + | hypothetical protein Daci_1523 1708654 - 1709166 + | hypothetical protein TERM 1334 1709216 - 1709198 - T 100 -14.6 -5.60993 | opp_overlap 1709198 TGCCGGACAAAAAAA GAGCTGCC ATC GGCAGCTC TTTGCATTGTGGGGC TERM 1335 1709198 - 1709216 + T 93 -14.6 -3.80625 | opp_overlap 1709198 TGCCGGACAAAAAAA GAGCTGCC ATC GGCAGCTC TTTGCATTGTGGGGC Daci_1524 1710736 - 1709261 - | major facilitator transporter TERM 1336 1710648 - 1710615 - G 86 -12.3 -4.21194 | gap 1, overlap 1710616 CGGCACCACGCAAAA CGCCTGCGCCGCCGGC TGG GCCGGCGT-GCGGGCA CGCTGCGCGTGTGCG TERM 1337 1710647 - 1710616 - G 72 -13.6 -3.12395 | gap 1, overlap 1710615 GGCACCACGCAAAAC GCCTGCGCCGCCGGC TGG GCCGGCGT-GCGGGC ACGCTGCGCGTGTGC TERM 1338 1710982 - 1711020 + H 78 -10.2 -3.86346 | gap 1 GGGCTCGTGCTAGGC TGGCGCCCGCT-GCGGC CATTGC GCCGCTGGCGCGCCCCA TTTCTGCCCGGGTCC TERM 1339 1711872 - 1711859 - g 81 -3.7 -4.84359 | opp_overlap 1711871, overlap 1711860 CCAGTTCGAGAAAAA GCCCG ACGA CGCGC TGCGCCGCATCTTCG Daci_1525 1711056 - 1712342 + | putative iron-regulated protein TERM 1340 1712385 - 1712424 + F 100 -20.6 -4.07885 | opp_overlap 1712407 TTCCTGCGCCCATGT GCCAAGGCCGCCGCCCCC GAAA GGGTTCGGCGGCCCTGGC TTTTCCAGGGACGTC TERM 1341 1712446 - 1712407 - f 70 -9.9 -3.53012 | gap 1, opp_overlap 1712385 CCGCCGCCCCCGAAA GGGTTCGG-CGGCCCTGG CTTTT CCAGGGACGTCCCCACCC ATGAATCTCTCCCCA TERM 1342 1712562 - 1712512 - g 82 -17.6 -3.01712 | gap 1 CTGCTCGGCCCAACA GCAGGACACGGTGGCTGCCGCGC CAGCGC GCGCGCCAGC-ACCGCAGCCTGC TCCCGATCCAGCTCC Daci_1526 1712447 - 1713958 + | hypothetical protein Daci_1527 1713958 - 1715043 + | periplasmic lipoprotein-like protein Daci_1528 1715027 - 1716229 + | hypothetical protein TERM 1343 1716284 - 1716317 + T 100 -15.5 -4.49556 | opp_overlap 1716289, overlap 1716289 GTGCAGCGCCAACGG AAAAAGGGTCTACGT TTGC ACGTAGACCCTTTTC TTTGTTTGGTGGCGC TERM 1344 1716312 - 1716289 - T 100 -15.4 -4.74103 | opp_overlap 1716284 1716289 GCGCCAACGGAAAAA GGGTCTACGT TTGC ACGTAGACCC TTTTCTTTGTTTGGT TERM 1345 1716289 - 1716312 + T 100 -15.4 -5.20222 | opp_overlap 1716289, overlap 1716284 GCGCCAACGGAAAAA GGGTCTACGT TTGC ACGTAGACCC TTTTCTTTGTTTGGT Daci_1529 1717309 - 1716530 - | enoyl-CoA hydratase/isomerase Daci_1530 1719309 - 1717384 - | peptidase M61 domain-containing protein TERM 1346 1718960 - 1718950 - G 83 -8.2 -4.56597 | overlap 1718951 GGTGCCGTTGAAAAA GCCG CGG CGGC GGTCCAGCCAGGCCG Daci_1531 1720257 - 1719439 - | thiol:disulfide interchange protein DsbC Daci_1532 1721570 - 1720302 - | UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase Daci_1533 1721621 - 1722487 + | MOSC domain-containing protein TERM 1347 1722578 - 1722606 + G 74 -15.3 -3.06815 | CTCAAATGCGGCATC GTGGGCCTGCCCA ATG TGGGCAAGTCCAC TCTCTTCAACGCGCT Daci_1534 1722557 - 1723651 + | GTP-binding protein YchF TERM 1348 1723741 - 1723770 + F 100 -18.7 -4.77036 | overlap 1723730 TCAGGTGCTGTCTGA CGGCGCTTCGTGT AACA ACATGAAGCGCCG TTTTTCATGGTGACG Daci_1535 1723829 - 1724263 + | hypothetical protein Daci_1536 1724241 - 1724558 + | XRE family transcriptional regulator TERM 1349 1724568 - 1724585 + F 91 -8.3 -4.7497 | opp_overlap 1724569, overlap 1724569 GCCTGAGTGGGATGA ACCGCGC TTGT GCGCGGC TTTTTCATGCCTGGA TERM 1350 1724569 - 1724584 + F 74 -11.8 -3.445 | opp_overlap 1724569, overlap 1724568 CCTGAGTGGGATGAA CCGCGC TTGT GCGCGG CTTTTTCATGCCTGG Daci_1537 1724592 - 1724936 + | hypothetical protein Daci_1538 1724942 - 1725820 + | hypothetical protein TERM 1351 1726621 - 1726564 - g 100 -20.7 -3.93695 | gap 1, overlap 1726585 1726603 GGGAGCACGGAGAAA GTGCCACAGGCCGTGGCACAACTT-GCC CCC GGCGAAAAAGTGCCACAGGCTGTGGCAC AAAGCCGCCTGGCGC TERM 1352 1726621 - 1726603 - g 100 -13.2 -4.56597 | overlap 1726564 1726585 GCCCCCGGCGAAAAA GTGCCACA GGC TGTGGCAC AAAGCCGCCTGGCGC TERM 1353 1726656 - 1726625 - g 70 -9.3 -3.85817 | overlap 1726585 AGGCTGTGGCACAAA GCCGCCTGGCGCC GGGGGT GGCGGCAGATGGC GCACAGGTGTTTGCT Daci_1539 1726252 - 1727400 + | hypothetical protein Daci_1540 1727515 - 1728549 + | hypothetical protein Daci_1541 1728674 - 1729555 + | nicotinate-nucleotide pyrophosphorylase TERM 1354 1730181 - 1730144 - g 79 -15.5 -3.29144 | gap 1 GCATGTGCCCTACAA GGGCTGCGGCC-CGGCCA TCA CGGCCGTGGCGGCAGGCC AGGTGGCGGCGGGCA Daci_1542 1729566 - 1730561 + | hypothetical protein TERM 1355 1730647 - 1730601 - T 74 -13.1 -3.16881 | gap 2, opp_overlap 1730608 GACTTACTGCATGAA CCAGCCGTG-GCTGACCA-CCAG AGA CTGGCCGGTCAGCGCATTGCTGG GAAAGCCCGCGAACA Daci_1543 1731371 - 1730589 - | 3-hydroxybutyrate dehydrogenase TERM 1356 1731658 - 1731640 - R 71 -8.8 -3.76839 | opp_overlap 1731639 1731650, overlap 1731649 1731650 CAACCCGAAGGGAAA GCCGGG AAAGGGG CCCGGC CCTTCGTTGCAGCCC Daci_1544 1732737 - 1731808 - | LysR family transcriptional regulator TERM 1357 1732003 - 1731982 - G 86 -14.4 -3.85698 | GCCGCGCTCGACAAA GCCGGCCG CGATCT CGGCCGGC ATGATCACCGCCAGG TERM 1358 1733120 - 1733079 - g 82 -13.7 -3.72576 | gap 1, overlap 1733080 TGGGCCTGCAGGAAA CCGTCGTCGTGGGCATGGCC GAC GGCCATGCCCAGG-CCACGC GCAATGCCAGCTTCG TERM 1359 1733119 - 1733080 - g 80 -17.2 -2.83403 | gap 1, overlap 1733079 GGGCCTGCAGGAAAC CGTCGTCGTGGGCATGGCC GAC GGCCATGCCCAGG-CCACG CGCAATGCCAGCTTC Daci_1545 1732868 - 1734514 + | benzoylformate decarboxylase TERM 1360 1734879 - 1734863 - g 72 -8.7 -4.09685 | opp_overlap 1734862 1734866 CCTGAGCCTGCAAAA CGGCATA GGC CATGCCG ATGTGTTGCGTGAAA Daci_1546 1734543 - 1735481 + | 2-dehydropantoate 2-reductase Daci_1547 1735524 - 1736498 + | hypothetical protein TERM 1361 1736811 - 1736799 - g 71 -10.5 -3.78934 | GGTGGTGGACAACAA GCCCG GCG CGGGC GGCAACATCGGCATC TERM 1362 1737445 - 1737435 - g 72 -6.8 -4.25256 | GCTGGAGCAAAAGAA CGTC AAC GACG TCATCCTCACCCTGG Daci_1548 1736569 - 1737567 + | hypothetical protein TERM 1363 1737594 - 1737616 + F 100 -11.9 -4.98531 | GGCCATCGCCCGCAA GCCGCCCGC TCCGC GCTGGCGGC TTTTTGCTTTCCGGG TERM 1364 1737740 - 1737714 - f 86 -14.5 -3.27297 | opp_overlap 1737737 1737737, overlap 1737712 1737733 ATCCACCAATGAACA GGCCAGCCTTC CCAAC AAAGGCTGGCC GCAGGCACTTTCGCC TERM 1365 1738396 - 1738350 - g 75 -9.3 -4.11216 | gap 2 GGCCGAGCCTGAAAA GCTGGTCCGCATCACGCCGCCCG TGG CGGGCCGCCTGGTGCG--CCTGC ACCACCAGCTGGGCG Daci_1549 1738015 - 1739223 + | RND family efflux transporter MFP subunit Daci_1550 1739220 - 1742393 + | CzcA family heavy metal efflux protein TERM 1366 1742474 - 1742503 + G 82 -11.4 -4.11692 | gap 1 GGCGCCGCAGCCCAG GCGCA-GACGGCG CCGTC CGCCGGCCTGCGC TTTTCCGACTACCTC TERM 1367 1743249 - 1743306 + G 73 -16.9 -2.54896 | gap 1, opp_overlap 1743209 GGGTCAATCCCACGC TGGCCGTGGGCATGGCCGCCGTGCCGTC CAC GGCGGC-CGGCACCGATGCCCAGGGCAA TCCCTTCGATGGCGG Daci_1551 1742393 - 1743724 + | outer membrane efflux protein TERM 1368 1744007 - 1744036 + G 82 -17.9 -3.04144 | CCCGCGCCCTGATCC TGGCGGCCATGGC GGCC GCCATGGCCGCGA TCTTCGCGCTGGACA TERM 1369 1744413 - 1744386 - g 70 -14.8 -2.74012 | CCATGAGGTCAACCA GCCGCTGGCGGC CATC GTCACCAGCGGC AATGCCTGCCAGCGC Daci_1552 1743910 - 1745058 + | histidine kinase TERM 1370 1745152 - 1745185 + G 81 -13.1 -3.86346 | gap 1 GCTGGCCTCGGTGGG CCTGTGCGTGCGCGCC TTC GGCGC-CACGCGCGAG TTTCTGGACCACTGG Daci_1553 1745051 - 1745689 + | two component LuxR family transcriptional regulator Daci_1554 1747412 - 1745751 - | protein of unknown function DUF894 DitE Daci_1555 1747857 - 1747402 - | DoxX family protein Daci_1556 1749767 - 1747869 - | amidohydrolase 3 Daci_1557 1750163 - 1749891 - | hypothetical protein Daci_1558 1750901 - 1750203 - | isochorismatase hydrolase Daci_1559 1751675 - 1750971 - | pirin domain-containing protein TERM 1371 1751316 - 1751352 + g 78 -8.7 -4.38129 | CTGGCCGCGCTCGTC GGGCATGATCCAGATCT GGA AGATCCGCGTCGTGTCC TTTTCCTGGTTGTAT TERM 1372 1752508 - 1752455 - g 74 -13 -3.61715 | opp_overlap 1752470, overlap 1752456 CATGCGCGTGAACAA TGCCG-AGGGCCTGGCGCCGGCCCTG CGCG CCGGGCTGG-GCCTGGCCCTGCAGCC CGAATTCCTGGCCTG TERM 1373 1752507 - 1752456 - g 74 -16.5 -2.76815 | opp_overlap 1752470, overlap 1752455 ATGCGCGTGAACAAT GCCG-AGGGCCTGGCGCCGGCCCTG CGCG CCGGGCTGG-GCCTGGCCCTGCAGC CCGAATTCCTGGCCT Daci_1560 1751778 - 1752701 + | LysR family transcriptional regulator Daci_1561 1753279 - 1752743 - | hypothetical protein TERM 1374 1753424 - 1753449 + G 73 -16.9 -2.52676 | gap 1 GCGGCATTGGGAATG GCAGCAGCCGGC CTG GCCGGCTGC-GC TGCGTTGCAGCCATC Daci_1562 1753373 - 1753987 + | hypothetical protein TERM 1375 1754015 - 1754036 + F 71 -7.9 -4.12188 | overlap 1754012 GTCTTGTTTTCGCTG CTTGGCCGT CTTG ACGGCCCGG TTTTAGCCCTGCTGA Daci_1563 1754131 - 1755201 + | NifR3 family TIM-barrel protein TERM 1376 1755916 - 1755880 - g 74 -13 -3.61398 | gap 1, overlap 1755838 CTCTGCCGCCAAGAA CTGGGCCGACGTGGGCG TGAT CACCGACGCCGGCC-AG TACGAGGCCGTGCTG Daci_1564 1755476 - 1757074 + | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase Daci_1565 1757074 - 1757613 + | cytochrome c class I Daci_1566 1757616 - 1758215 + | DNA-3-methyladenine glycosylase I TERM 1377 1758259 - 1758270 + F 72 -2.2 -4.82901 | overlap 1758254 TTTCGTTTTTGACCC TGCC GGGT GGTA TTTTTCTGAGCCCGG Daci_1567 1758452 - 1759639 + | integrase catalytic region TERM 1378 1759825 - 1759800 - f 78 -14.1 -3.16881 | gap 1 GAGTCAGTTGACGAA GCAGTCCTGTCC TTC GG-CAGGACTGC AACCCCGCAGGCGGC Daci_1568 1760059 - 1760457 + | hypothetical protein Daci_1569 1761845 - 1760529 - | glutamate-1-semialdehyde-2,1-aminomutase TERM 1379 1761724 - 1761694 - G 70 -8.8 -3.85698 | opp_overlap 1761721, overlap 1761695 1761720 TTCTCGTCCCAGAAA TGCGCGCCCTGCGC ACG GCGCACGAAGCGCG GCGTGCCGCCCACGG Daci_1570 1762862 - 1761906 - | phosphomethylpyrimidine kinase type-1 Daci_1571 1762984 - 1763130 + | rubredoxin-type Fe(Cys)4 protein Daci_1572 1763178 - 1763576 + | response regulator receiver protein Daci_1573 1763576 - 1763941 + | response regulator receiver protein Daci_1574 1763957 - 1764484 + | CheW protein Daci_1575 1764503 - 1766752 + | methyl-accepting chemotaxis sensory transducer TERM 1380 1766851 - 1766828 - g 74 -11.6 -3.67976 | overlap 1766829 TTGACGAATCGCAAA CGGGCGCGGC GCAG GCCGCGCACA CCGAACAGGACCTGG TERM 1381 1767070 - 1767102 + G 81 -12 -3.85698 | opp_overlap 1767089 GGCTCTCCGGCCCTG GTGCTGCGCGGC ATGGAAAGC GCCGTGCAGCGC TTTGTGCAGCGCCCC Daci_1576 1766809 - 1773222 + | CheA signal transduction histidine kinase TERM 1382 1773263 - 1773246 - T 100 -11.3 -5.4505 | opp_overlap 1773246 GGCCTGAACAAAAAA GAGCAGC ATCC GCTGCTC TTTTTTTATTCCAGC TERM 1383 1773246 - 1773263 + T 100 -11.3 -5.7946 | opp_overlap 1773246 GGCCTGAACAAAAAA GAGCAGC ATCC GCTGCTC TTTTTTTATTCCAGC Daci_1577 1774767 - 1773286 - | deoxyribodipyrimidine photo-lyase Daci_1578 1774792 - 1775391 + | hypothetical protein Daci_1579 1775388 - 1775846 + | Holliday junction resolvase YqgF Daci_1580 1775843 - 1776361 + | phosphoribosyltransferase Daci_1581 1776364 - 1777326 + | aspartate carbamoyltransferase catalytic subunit TERM 1384 1777470 - 1777493 + F 100 -9.6 -4.87665 | gap 1 CTTTTTCCATGCCCG GTGTCCTGGAC TGA GTCCAGG-CGC TTTTTGTGAATGCAA Daci_1582 1777571 - 1778866 + | amidohydrolase TERM 1385 1778891 - 1778917 + G 74 -15 -3.0395 | GTCTGCGCAGGGGAG GGCGCGCCACGC TGC GCGCAGCGCGCC TGTTCGGCCATGTGT Daci_1583 1778869 - 1779618 + | phospholipid/glycerol acyltransferase Daci_1584 1779633 - 1780109 + | GCN5-related N-acetyltransferase Daci_1585 1780522 - 1780136 - | putative lipoprotein Daci_1586 1781192 - 1780560 - | hypothetical protein Daci_1587 1782568 - 1781189 - | protein serine/threonine phosphatase TERM 1386 1781332 - 1781342 + g 70 -8.2 -3.89346 | opp_overlap 1781330 GCTCGTGCAGGAAGC GCGC CAG GCGC TTTCTGCCGTGGGCG Daci_1588 1783826 - 1782666 - | ABC transporter related TERM 1387 1784816 - 1784867 + G 82 -19.5 -2.65264 | gap 3 GGCCGCGCCAGCTCG GCCGAGGCGCAGC-CGCTGCGCCTGC GCG GCTGGCGCTGCGCGCTG-GCCT-GGC TGGTGTGCCTGCTGC Daci_1589 1783976 - 1785622 + | binding-protein-dependent transport systems inner membrane component Daci_1590 1785680 - 1786588 + | LysR family transcriptional regulator Daci_1591 1786700 - 1788085 + | hydroxydechloroatrazine ethylaminohydrolase TERM 1388 1789134 - 1789162 + GF 72 -13.7 -2.62396 | CAGCGGCATGCTGTG CGACGGCGTGGGC TCG GCCTTCGCCGCCG TGATGTCCAGCCCTC Daci_1592 1788292 - 1789608 + | xanthine permease Daci_1593 1789580 - 1790008 + | arsenate reductase TERM 1389 1790165 - 1790192 + G 72 -15.6 -2.95789 | gap 1, overlap 1790162 TGGCCGCAGGTGCCA TCGGCGCCC-TGG GCG CCACGGGCGCCGG TCTGGTTGGTGTGGT TERM 1390 1790748 - 1790724 - g 74 -12.1 -3.65522 | CATCGAGGCGAAGAA CCTGCCCACCG TCT CGCTGGGCAAG ACGGCCGATCTGCGC Daci_1594 1790104 - 1791666 + | protease Do TERM 1391 1791713 - 1791747 + F 79 -12.1 -3.53012 | gap 1, overlap 1791712 1791716 CACACTTGATTGATC GC-ACGGCCCCGGCGT GAAT GCGCCGGGGCTATCGC TTTGGGAAAACCCAG TERM 1392 1792992 - 1793041 + G 73 -7 -4.20084 | gap 3 CTGGTGGACTGGCAG CCGCTGGCCGCCGACCCGCAGGCCG TGC CGGCCAGCCG--CGGCC-CCAACGG TTTTGCCTGGCTGGT Daci_1595 1791975 - 1793498 + | ABC transporter related Daci_1596 1793535 - 1793939 + | hypothetical protein TERM 1393 1793946 - 1793928 - f 74 -13.1 -3.18728 | ATGCCTAAGATTGAA GCGGCGG TGTAG CCGCCGC TCACCCCCTGAGTCG Daci_1597 1794000 - 1794674 + | two component transcriptional regulator TERM 1394 1794713 - 1794760 + G 77 -14.9 -3.14132 | gap 2, overlap 1794717 1794720 TCCTCCCTTGTCGCC CGGGCGCGCAGCCGCCTGCCCGG TGCA CTGGGCACGCGGCTGC-T-CCTG TTCCTGGGCGCGGCC TERM 1395 1794717 - 1794758 + G 85 -17.9 -3.13403 | overlap 1794713 1794720 CCCTTGTCGCCCGGG CGCGCAGCCGCCTGCCCGG TGCA CTGGGCACGCGGCTGCTCC TGTTCCTGGGCGCGG TERM 1396 1794720 - 1794755 + G 87 -22.6 -2.77523 | overlap 1794717 1794713 TTGTCGCCCGGGCGC GCAGCCGCCTGCCCGG TGCA CTGGGCACGCGGCTGC TCCTGTTCCTGGGCG TERM 1397 1795336 - 1795375 + G 84 -16.4 -3.53012 | gap 1, overlap 1795349 GGTGCGGCCCCTGGT GGCCGAGCTCAACGCGCTG CTG CAGCGCGT-GGGCCAGGCC TTTGAGGCGCAGCAG Daci_1598 1794671 - 1796134 + | histidine kinase TERM 1398 1796620 - 1796645 + G 75 -4.5 -4.62069 | CGTGAACTGGGCATA CGCACCTACGC CAGC GCGCCCGTGCG TTTTTCGGATGGCCA TERM 1399 1797279 - 1797267 - g 75 -10.5 -4.08216 | CGACGCGCTGCAAAA GGCCG ATG CGGCC ATGTACCGCGTCAAG Daci_1599 1796305 - 1797336 + | diguanylate cyclase with GAF sensor Daci_1600 1799039 - 1797432 - | methyl-accepting chemotaxis sensory transducer TERM 1400 1797563 - 1797514 - G 71 -11.3 -3.57144 | gap 1, opp_overlap 1797544 1797546 GCCTCCAGCTTGAAA GCGCCCACCGTGCGCA-CCAGGTC GCC GGCCTGGCCGCGCAGGCTGGAGGC GGCGGCGGCCATCTC TERM 1401 1798684 - 1798674 - G 78 -6.8 -4.58685 | overlap 1798675 AAACCCCTGCAAAAA TGCG CCG CGCA CGACCTCGAAACGGT TERM 1402 1799208 - 1799244 + H 70 -10.8 -3.47516 | opp_overlap 1799199, overlap 1799207 CGGAAACGGCGATGC TGGCTTGCCGATGGCC TGCGT GGCCAATGGCGATCCA TGTTGTATTGGTTTG Daci_1601 1799470 - 1800060 + | hypothetical protein Daci_1602 1800895 - 1800083 - | IclR family transcriptional regulator Daci_1603 1800913 - 1801926 + | dihydrodipicolinate synthetase TERM 1403 1802078 - 1802097 + G 73 -12.8 -3.53012 | CATTGGCCCTGGCCG GGCCGGCG CTGG CGCTGGCC TTTCCCGGCAAGACC Daci_1604 1801987 - 1802991 + | hypothetical protein Daci_1605 1803252 - 1803028 - | hypothetical protein Daci_1606 1803963 - 1803274 - | glutathione S-transferase domain-containing protein Daci_1607 1804657 - 1803977 - | hypothetical protein Daci_1608 1804780 - 1805337 + | XRE family transcriptional regulator Daci_1609 1806115 - 1805357 - | hypothetical protein TERM 1404 1805493 - 1805479 - G 71 -2 -4.53036 | overlap 1805480 1805481 1805490 CCACAAAGAGCAAAA CCGCTG CAA CAGCCA TGGCCGGCAGGTGCC Daci_1610 1807606 - 1806125 - | tyrosinase TERM 1405 1807039 - 1807022 - G 75 -8.3 -4.13767 | opp_overlap 1807021 GCCGTCATGGGAAAA GGCGGTG ATGC CTCCGCC GTATTCCAAGGTGCC TERM 1406 1807944 - 1807921 - R 100 -14.6 -5.4505 | opp_overlap 1807921 CCGGGCAACAAAAAA CCCGCATGCC GGTG AGCATGCGGG TTTGTGATGTCCTGA TERM 1407 1807921 - 1807944 + r 95 -13.9 -4.03078 | opp_overlap 1807921 CCGGGCAACAAAAAA CCCGCATGC CGGTGA GCATGCGGG TTTGTGATGTCCTGA Daci_1611 1809221 - 1808094 - | integrase family protein Daci_1612 1809981 - 1809439 - | hypothetical protein Daci_1613 1810997 - 1809978 - | hypothetical protein TERM 1408 1810209 - 1810239 + g 71 -10.2 -3.68222 | AACGGGGGTGGGTTT GCGGGCCTCGGCCG TGG CCGCCGTGATCCGC TTCTTGCCCTTGGCC TERM 1409 1810389 - 1810428 + g 76 -2.6 -4.72846 | gap 1, opp_overlap 1810399, overlap 1810422 CGGCGCGTTGCCCAG GGCCAGCAGATCCTGCACA TGC TGCGC-GGAGCGGCCGACC TTTTTGGCTATCTGC Daci_1614 1812109 - 1811291 - | hypothetical protein TERM 1410 1811499 - 1811509 + g 82 -6.8 -4.77438 | CCCATCTCATCGCCT TCCG CTT CGGA TTTTTGGTAGTACAT Daci_1615 1812921 - 1812106 - | hypothetical protein Daci_1616 1814121 - 1813003 - | hypothetical protein Daci_1617 1814428 - 1814709 + | hypothetical protein TERM 1411 1814877 - 1814834 - T 76 -6.9 -4.56597 | CTGCTCTGGGAAAAA TTATCATCGCCACTCAT ACAAAAGTCA ATGAGTGCCGCTGATAA TAAAACTACGTAGAA TERM 1412 1814902 - 1814883 - T 85 -6.5 -4.77165 | opp_overlap 1814883 1814894, overlap 1814894 CCGCTGATAATAAAA CTACGTA GAAACG TACGTAG TTCGTTCTCGACTGC Daci_1618 1815349 - 1814930 - | hypothetical protein Daci_1619 1816192 - 1815479 - | putative phage repressor Daci_1620 1816275 - 1816529 + | XRE family transcriptional regulator Daci_1621 1816855 - 1817340 + | transcriptional regulator CII, putative Daci_1622 1817510 - 1818424 + | hypothetical protein Daci_1623 1818475 - 1819983 + | helicase domain-containing protein Daci_1624 1819980 - 1820909 + | primase 2 Daci_1625 1821431 - 1822108 + | hypothetical protein TERM 1413 1822227 - 1822249 + T 95 -11.3 -4.67038 | gap 1, opp_overlap 1822227, overlap 1822222 TTCGCCCAGAAAAAA GCCCGCTAGG TTCG CC-AGCGGGC TTTTGCTTTTACAGG TERM 1414 1822249 - 1822227 - T 100 -12.7 -5.24129 | opp_overlap 1822227 1822222 TTCGCCCAGAAAAAA GCCCGCTAG GTTCG CCAGCGGGC TTTTGCTTTTACAGG Daci_1626 1822563 - 1822258 - | hypothetical protein TERM 1415 1822554 - 1822528 - G 76 -7.2 -4.36914 | overlap 1822529 1822549 GTTCGCTGGAGAAAA CGCCGCCGTGAA CGA TTCAAAGCGGCC ATCGATCAAGTAGAA Daci_1627 1823020 - 1823781 + | HNH endonuclease Daci_1628 1823793 - 1824113 + | transcriptional activator Ogr/delta Daci_1629 1824355 - 1824615 + | hypothetical protein TERM 1416 1824672 - 1824683 + F 72 -2.2 -4.76644 | gap 1, opp_overlap 1824665 1824672, overlap 1824672 1824678 TTTAGAAACAAAACC GG-GC TTT GCACC TTTTTAGTGCATGTT TERM 1417 1824720 - 1824708 - f 77 -3.4 -5.0133 | CATGTTGTTAAAAAA CAAC GGAAT GTTG TAAATACGCAACAGG TERM 1418 1824778 - 1824790 + F 84 -6.2 -5.0133 | TCGACGGGAACCCGA GCGG CCTGA CCGC TTTTTTCGCACGGTC TERM 1419 1824888 - 1824861 - gf 82 -4.1 -5.03715 | gap 2 AGGACCCGGAAAAAA GCCCGC-CTC-CC TCAA GGTGATCGCGGGC ACGGACCGCAAGGAC TERM 1420 1825259 - 1825242 - g 73 -10.5 -3.96068 | opp_overlap 1825252 TGAGTTCAAGAACAA CGGCCAG CGCC CCGGCCG AAAGCCAAGGGCCGC Daci_1630 1824841 - 1825278 + | hypothetical protein TERM 1421 1825570 - 1825589 + GF 81 -7.8 -4.66833 | CAAGCCTGACGGCAC GCGCCG GTTCACGA CGGCGC TTTTTGCGATTGCGC Daci_1631 1825226 - 1826986 + | terminase TERM 1422 1828225 - 1828235 + G 70 -8.2 -3.95986 | opp_overlap 1828213 1828216, overlap 1828219 CAACAGGCCCGAGCG GCGC TGC GCGC TTTCCTTGGGTTCGA Daci_1632 1826983 - 1828272 + | HK97 family phage portal protein TERM 1423 1828862 - 1828894 + G 78 -9.1 -4.3208 | overlap 1828847 1828855 CCTGGCTAGGCGGCA GCTCAGCTGTCGAGC AGG GCTTTGCAGATGAGC TTTTGCCTTCTGACC Daci_1633 1828276 - 1829139 + | peptidase S14 ClpP Daci_1634 1829149 - 1830366 + | major head protein TERM 1424 1830382 - 1830408 + F 100 -13.7 -4.44046 | opp_overlap 1830381 1830384, overlap 1830384 TCACAGGGCGATAAC TAGGCGGGGCT TTCAT GGCCCCGCCTG TTTATTTGAACTGGA TERM 1425 1830406 - 1830384 - f 73 -13.4 -2.83449 | opp_overlap 1830384 1830382, overlap 1830381 ACAGGGCGATAACTA GGCGGGGC TTTCATG GCCCCGCC TGTTTATTTGAACTG TERM 1426 1830384 - 1830406 + F 91 -14.1 -3.82628 | opp_overlap 1830381 1830384, overlap 1830382 ACAGGGCGATAACTA GGCGGGGCT TTCAT GGCCCCGCC TGTTTATTTGAACTG TERM 1427 1830892 - 1830869 - f 74 -3.1 -4.7497 | opp_overlap 1830890, overlap 1830876 TGGACGGAGCAAAAA CCAACAGTG GGGCAG CAGTGCTGG CGCAGGCGGCCTACT Daci_1636 1831137 - 1831616 + | hypothetical protein Daci_1637 1831645 - 1831956 + | phage head-tail adaptor Daci_1638 1831949 - 1832407 + | HK97 family phage protein Daci_1639 1832404 - 1832787 + | hypothetical protein TERM 1428 1832812 - 1832829 + F 100 -9.8 -5.4505 | opp_overlap 1832810 1832811 CATCACCAACCAACC GCCGCC CTCTGA GGCGGC TTTTTTATTCCCAAG Daci_1640 1832854 - 1833507 + | hypothetical protein TERM 1429 1833560 - 1833518 - g 83 -4.7 -4.88736 | gap 1, overlap 1833541 CATGAGCGAGAAAAA GACCATGACCACGGCCGAGC AGAT GCGCGCCCGC-ATCCTGGCC AGCGCGAACCCGAAG TERM 1430 1833697 - 1833673 - g 71 -11.3 -3.65542 | opp_overlap 1833671, overlap 1833671 CCGAGGGCGAAAAGA TGCGCCTGGCC CAT GGCGTGGCGCA GGTGCTGTGCGACGA Daci_1641 1833504 - 1833866 + | hypothetical protein Daci_1642 1833923 - 1834174 + | hypothetical protein TERM 1431 1834337 - 1834364 + G 85 -17 -3.23216 | gap 1 AGCCGCCGCATTGAC CGCCCTTGGCGCC GCA GGCGCCG-GGGCG TTGGTGGTGCTGAAC Daci_1643 1834176 - 1836650 + | hypothetical protein Daci_1644 1836654 - 1837268 + | hypothetical protein Daci_1645 1837270 - 1838202 + | hypothetical protein Daci_1646 1838199 - 1838609 + | NLP/P60 protein Daci_1647 1838957 - 1842331 + | hypothetical protein Daci_1648 1842328 - 1842999 + | hypothetical protein Daci_1649 1842996 - 1843703 + | hypothetical protein TERM 1432 1843723 - 1843736 + F 100 -9.5 -5.60993 | TCAACAATTTTATTA CCCGC TTCG GCGGG TTTTTTTATGCCCAA Daci_1650 1843773 - 1844168 + | hypothetical protein TERM 1433 1844381 - 1844398 + G 71 -10.5 -3.72324 | GACACCATTTTCTCG GCCTGCG TGCT CGCGGGC TTGTTGATCAACGTG Daci_1651 1844195 - 1844464 + | hypothetical protein Daci_1652 1844461 - 1844937 + | hypothetical protein Daci_1653 1844934 - 1845299 + | hypothetical protein Daci_1654 1845296 - 1845580 + | hypothetical protein Daci_1655 1845577 - 1845855 + | hypothetical protein Daci_1656 1845852 - 1846121 + | hypothetical protein Daci_1657 1850766 - 1846435 - | hypothetical protein TERM 1434 1850790 - 1850807 + r 76 -5.5 -4.72272 | GTTGAAGCCCAGGCG CAGGTGC AGGC GCAGCTG TTTTTCCTGGGCGCC Daci_1658 1852691 - 1850769 - | surface antigen (D15) TERM 1435 1852672 - 1852641 - G 100 -16.6 -4.21607 | opp_overlap 1852646, overlap 1852647 TGCACTCAACAGAAA CAAAAACGCCGGCC CTCG GGCCGGCGCTGTTG CGGGGGGGAGCTTGG TERM 1436 1852666 - 1852647 - G 100 -16.4 -5.4659 | opp_overlap 1852646, overlap 1852641 CAACAGAAACAAAAA CGCCGGCC CTCG GGCCGGCG CTGTTGCGGGGGGGA Daci_1659 1853883 - 1852696 - | hypothetical protein TERM 1437 1853560 - 1853575 + g 72 -6 -4.25104 | CTCGTCCCAGCCCAT GGCCTC GATG GCGGCC TTTTCCTCGGGCGAG Daci_1660 1854625 - 1853915 - | GCN5-related N-acetyltransferase TERM 1438 1854350 - 1854370 + g 77 -14.7 -3.12351 | opp_overlap 1854332 GAAGCGCTTGCCCTG GCTGCGCTG CTC CAGCGCGGC TTCGATATAGGCACG Daci_1661 1855491 - 1854637 - | ATPase TERM 1439 1856013 - 1856029 + G 72 -4.3 -4.56775 | opp_overlap 1856003, overlap 1856014 AAAGGGGCCTGCGTC TCCTGCC ACG GCCAGGG TTTTTCCAAGCCCAT Daci_1662 1855608 - 1856282 + | cytochrome c class I TERM 1440 1856308 - 1856323 + T 100 -11.8 -5.07107 | opp_overlap 1856308 TCCTCCAAGGCAAAA GCCCGC AATT GCGGGC TTTTTTCGGGCTTTG TERM 1441 1856323 - 1856308 - T 89 -11.8 -4.27316 | opp_overlap 1856308 TCCTCCAAGGCAAAA GCCCGC AATT GCGGGC TTTTTTCGGGCTTTG Daci_1663 1856833 - 1856375 - | hypothetical protein TERM 1442 1856841 - 1856859 + r 70 -4.4 -4.56597 | overlap 1856842 TTGAACATGGTGGCG CGCAGCGT AGC ACGCAGCC TTTTTGGGCGGGCAC Daci_1664 1857511 - 1856912 - | short chain dehydrogenase Daci_1665 1857618 - 1858508 + | LysR family transcriptional regulator TERM 1443 1858523 - 1858561 + T 90 -14.5 -3.44051 | gap 1, overlap 1858498 AGGCCCGGTTTTCAG GGGCCGGGCGGCGGCGGG GCTT CCTGCGGC-GCCTGGTCC TTCTCCTGCTGCGCC Daci_1666 1860402 - 1858519 - | glutathione-regulated potassium-efflux system protein KefC TERM 1444 1859509 - 1859479 - G 86 -13.2 -3.87815 | CTTGAGCGCCAGAAA GCCCAGCACCATGG CCG CCATGGCCCAGGGC GCGCGCAGCAGCACG TERM 1445 1860543 - 1860560 + H 82 -9.1 -4.4261 | gap 1, overlap 1860543 1860544 1860550 CTGCCCCTGGCCGGG C-GCCCCC TGA GGGGGCCG TTTTCATCTTGGGGC Daci_1667 1860700 - 1861329 + | lysine exporter protein LysE/YggA Daci_1668 1861551 - 1862135 + | dehydratase TERM 1446 1862180 - 1862196 + T 82 -9.3 -4.4261 | overlap 1862179 TACGCAAGGTCCGCC GCCCCCC CAA GGGGCGC TTTTCATCTTGGGGC TERM 1447 1862252 - 1862230 - T 100 -16.3 -5.14563 | CCGGCGATGAAAAAA GCCCGCAGG GGGCA CCTGCGGGC TGGCTGCGTGGTGGC Daci_1669 1862595 - 1862290 - | hypothetical protein Daci_1670 1863276 - 1862779 - | RNA methyltransferase Daci_1671 1864063 - 1863329 - | ComF family protein Daci_1672 1864153 - 1865055 + | biotin synthesis protein BioC TERM 1448 1865183 - 1865165 - f 71 -8 -4.07568 | CCCGGGCCGGGAAAA GACCAGCG GTC CGCAGGCC GAAAGGGGAGACGAT TERM 1449 1865256 - 1865230 - f 79 -12.9 -3.51825 | opp_overlap 1865223 CCACGGGAACGAGAA CGGGCCGACCC ATCCA GGAGCGGCCCG CCCACGAGTTTGATC TERM 1450 1865283 - 1865318 + F 80 -10.4 -4.07124 | overlap 1865285 1865286 1865288 GATCATCACCGGCTG CAGCAGTGCCTGTTCC TCTG GGAGCGGGCACTGGTC TTTCTGTCCCTGCTG TERM 1451 1865285 - 1865316 + F 82 -13 -3.6269 | overlap 1865283 1865286 1865288 TCATCACCGGCTGCA GCAGTGCCTGTTCC TCTG GGAGCGGGCACTGG TCTTTCTGTCCCTGC TERM 1452 1865286 - 1865315 + F 79 -16.5 -2.77132 | overlap 1865285 1865283 1865288 CATCACCGGCTGCAG CAGTGCCTGTTCC TCTG GGAGCGGGCACTG GTCTTTCTGTCCCTG TERM 1453 1865288 - 1865313 + F 75 -13.3 -2.92495 | overlap 1865286 1865285 1865283 TCACCGGCTGCAGCA GTGCCTGTTCC TCTG GGAGCGGGCAC TGGTCTTTCTGTCCC Daci_1673 1865352 - 1865642 + | hypothetical protein TERM 1454 1866864 - 1866835 - g 71 -10.7 -3.62046 | gap 1, opp_overlap 1866837, overlap 1866837 1866838 CCACTGGTCCAACAA GAC-CGGCCAGCTG GTG CAGCCGGCCGAGTT CGTGGCCGCCCGCAC TERM 1455 1866861 - 1866837 - g 79 -15.7 -3.38991 | opp_overlap 1866837, overlap 1866835 1866838 ACTGGTCCAACAAGA CCGGCCAGCTG GTG CAGCCGGCCGA GTTCGTGGCCGCCCG TERM 1456 1866860 - 1866838 - g 77 -17 -2.63073 | opp_overlap 1866837, overlap 1866837 1866835 CTGGTCCAACAAGAC CGGCCAGCTG GTG CAGCCGGCCG AGTTCGTGGCCGCCC Daci_1674 1865759 - 1866901 + | cytochrome c oxidase, subunit II Daci_1675 1866937 - 1868607 + | cytochrome c oxidase, subunit I TERM 1457 1868668 - 1868652 - g 84 -10.1 -4.4773 | GCACAGCAACGAAAA GCCAACC TGC GGCTGGC GCTGATCCTGGTATC Daci_1676 1868631 - 1868738 + | hypothetical protein TERM 1458 1869161 - 1869182 + G 71 -3 -4.67038 | overlap 1869140 ACGCCAGGCGGCCGC GCATTTCA ACAAGC TGGAGTGC TTTTGCTTTTCGCAG Daci_1677 1868790 - 1869383 + | cytochrome C oxidase assembly protein Daci_1678 1869380 - 1869592 + | putative transmembrane protein TERM 1459 1869716 - 1869746 + G 71 -10.3 -3.75738 | CGTGCCGGCCGAGTC CAGCCACCCCGTC ATGGC GGCGGCGGGGCTG TTCTTCGTGATCCTG TERM 1460 1870073 - 1870028 - g 74 -13.9 -3.30124 | gap 1 GGGCAGCCTGGACAA CGCCTTGCTGTGGCCCGACTTC AAG GCGGTCTGGCC-CAGCATGGCG GCCGGCGCCACGGCC Daci_1679 1869663 - 1870544 + | cytochrome c oxidase subunit III TERM 1461 1870568 - 1870597 + T 100 -18.1 -3.53012 | opp_overlap 1870574, overlap 1870574 CCTGCCCGCCCCATG CAAAAAGAAGCGC CAGG GCGCTTCTTTTTG TTTGCGGGGGCAGGG TERM 1462 1870574 - 1870591 + T 100 -11.3 -5.27335 | opp_overlap 1870574, overlap 1870568 CGCCCCATGCAAAAA GAAGCGC CAGG GCGCTTC TTTTTGTTTGCGGGG TERM 1463 1870591 - 1870574 - T 95 -11.3 -4.65895 | opp_overlap 1870568 1870574 CGCCCCATGCAAAAA GAAGCGC CAGG GCGCTTC TTTTTGTTTGCGGGG Daci_1680 1870862 - 1870620 - | putative transmembrane protein Daci_1681 1870892 - 1871665 + | putative transmembrane cytochrome oxidase Daci_1682 1871679 - 1872341 + | hypothetical protein TERM 1464 1872444 - 1872474 + F 77 -7.6 -4.35524 | gap 1, opp_overlap 1872451 1872452, overlap 1872445 TATGGTTTGCGGCTG TGCGAAAGCG-CC TTCAGC GGACGCTTTCGCC TTTTCCCTTTCCAGC Daci_1683 1872551 - 1873165 + | electron transport protein SCO1/SenC TERM 1465 1873178 - 1873211 + F 100 -18.3 -3.65902 | opp_overlap 1873187 TGATCCTGCGCGTGC CGCAGCCAATGTGAC CCCC GTCACATTGACTGCG TTTAGGTGCGCTGCA TERM 1466 1874747 - 1874711 - g 82 -20.1 -2.52464 | overlap 1874692 TGCTGGCCGAAGGCA TGCAGGCCGCCAGCCAG GCC CAGGCCGGCGGCGTGCA GCAGGTGCAGGCCGC Daci_1684 1873327 - 1874904 + | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor Daci_1685 1874901 - 1876658 + | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) Daci_1686 1876983 - 1876687 - | putative transcriptional regulator Daci_1687 1877276 - 1876980 - | addiction module killer protein Daci_1688 1878055 - 1877324 - | cyclic nucleotide-binding protein Daci_1689 1879220 - 1878243 - | hypothetical protein Daci_1690 1881172 - 1879220 - | 3-oxoacyl-(acyl carrier protein) synthase III TERM 1467 1880543 - 1880519 - G 73 -12.8 -3.53444 | GTAGTCGCCGGCAAA GCTGCGCAGG TGCGT CCAGCGCAGC TTCAGGCGCAGGCCC Daci_1691 1882123 - 1881188 - | fatty acid desaturase TERM 1468 1881538 - 1881575 + g 95 -15.5 -4.11216 | CCAGCAGCCAGTGCA GGCCATGCAGCTGGGGA ACGA TCACCAGCAGCAAGGCC TTTTGCCAATCCAGC Daci_1692 1882866 - 1882120 - | fatty acid hydroxylase Daci_1693 1883911 - 1882886 - | hypothetical protein TERM 1469 1883465 - 1883435 - G 73 -10.3 -3.85817 | gap 1 AGCCGCTTCCAGAAA GGC-CCGGCCCTCG GGCG CGCCGGCCGGAGCC ACCAGCACCAGGGGC TERM 1470 1883919 - 1883935 + r 73 -9.4 -3.96148 | opp_overlap 1883919 GCGGGCAATAAAAAA CCCGGA GATTA TCCGGG TTTGTCGTGAAGCGG TERM 1471 1883935 - 1883919 - R 100 -9.4 -5.4505 | opp_overlap 1883919 GCGGGCAATAAAAAA CCCGGA GATTA TCCGGG TTTGTCGTGAAGCGG Daci_1694 1884920 - 1883976 - | RNA polymerase, sigma 32 subunit, RpoH Daci_1695 1886705 - 1886229 - | hypothetical protein Daci_1696 1887502 - 1887071 - | hypothetical protein Daci_1697 1887686 - 1888126 + | helix-turn-helix domain-containing protein Daci_1698 1889503 - 1888547 - | hypothetical protein TERM 1472 1889262 - 1889281 + g 100 -2.8 -5.52909 | GCGGTGTCAGCCAAG TGGCGAAT CAGT AGTTGCCA TTTTTTTGCGTCTTC TERM 1473 1889542 - 1889509 - R 100 -9.9 -4.82901 | GTGTGGTCATAAAAA TGTTAAGTAAATTGT TTGT AGAATTTACTTAACA ATCTACACGCAAGCC TERM 1474 1889704 - 1889719 + r 84 -10.4 -4.25056 | CGTGTCTGATGCTTA GCAGCC CTCG GGCTGC TTTCTTCATACGATG Daci_1699 1890392 - 1889820 - | hypothetical protein Daci_1700 1890957 - 1890487 - | XRE family transcriptional regulator TERM 1475 1890806 - 1890819 + g 77 -3.7 -4.7254 | AAGTATCCAGTTGTG GGCTC TGTA GTGCC TTTTTCGTAGGCAAT Daci_1701 1890992 - 1891282 + | hypothetical protein TERM 1476 1891316 - 1891289 - f 100 -9.2 -6.0427 | ATGACATAAAAAAAA CCGATCAATCCC CGAA GAAATTGACCGG CCAGAGTGCTGATAA TERM 1477 1891408 - 1891385 - f 85 -9.6 -4.63218 | opp_overlap 1891383 CGGTTGTCAAGAAAA TCCGACCTCA AGCA TGAGGTTGGA GGATATTCTGTTGTC TERM 1478 1891920 - 1891953 + F 73 -5.2 -4.62984 | ACCGTGAGCATCATG TCGCTCCGAGAGGC TGGCGT GCCCCTTGAAGTGA TTTTGTATCTGGTAG TERM 1479 1892914 - 1892891 - g 73 -12.4 -3.48924 | overlap 1892893 TGATCTGTGACAGAA CAGGCCTCCC CCTA GGGAGGCCCA CGCTAACAGTGATGA TERM 1480 1892912 - 1892893 - g 79 -15 -3.31905 | overlap 1892891 ATCTGTGACAGAACA GGCCTCCC CCTA GGGAGGCC CACGCTAACAGTGAT Daci_1702 1892059 - 1894011 + | hypothetical protein TERM 1481 1894512 - 1894495 - g 71 -2.6 -4.61747 | TCAAGAACTACAAAA CGAGGC TGATCT GGCTCG ATGAGGCTCAGCACC Daci_1703 1894014 - 1894982 + | hypothetical protein TERM 1482 1895505 - 1895488 - f 71 -6.9 -4.2349 | opp_overlap 1895488 1895499, overlap 1895490 GTCGCAGATGGAAAA CAGCTGC AGGT GCAGCGG TTGCTTGATGGGGTT Daci_1704 1895590 - 1895946 + | hypothetical protein TERM 1483 1896513 - 1896525 + G 77 -3.3 -4.72497 | overlap 1896514 GACGATCTCCTTACC TCTGC AGA GCGGG TTTTCTTAATGAATG Daci_1705 1896129 - 1896710 + | hypothetical protein Daci_1706 1897162 - 1897746 + | hypothetical protein TERM 1484 1899390 - 1899404 + G 75 -4.9 -4.56133 | overlap 1899378 1899373 TGGGCAGCATAGCTG CGGCG TTGAT CGCTG TTTTGATTCTTACGA Daci_1707 1898981 - 1899466 + | hypothetical protein Daci_1708 1899744 - 1900880 + | hypothetical protein Daci_1709 1900992 - 1901318 + | hypothetical protein Daci_1710 1901986 - 1901705 - | histone family protein nucleoid-structuring protein H-NS Daci_1711 1903844 - 1902189 - | sulfatase Daci_1712 1905269 - 1903881 - | heavy metal sensor signal transduction histidine kinase TERM 1485 1904250 - 1904264 + g 70 -4.2 -4.41494 | opp_overlap 1904248, overlap 1904251 ACGACGTAATAAGCT CGCATC CAA GATGCC TTTTGCTTCGCCCTG TERM 1486 1905238 - 1905220 - G 78 -8.8 -4.3207 | opp_overlap 1905217 1905220, overlap 1905233 AGAGAAATAGACAAA CGCGCC GACAAAG GGCGCG TCGCTTTTTTTGCTC Daci_1713 1905949 - 1905266 - | two component heavy metal response transcriptional regulator TERM 1487 1907275 - 1907261 - g 72 -8.6 -4.0162 | TGCCCACAGCACAAA CTGCTT ATG AAGCAG CCGTGAAGGGCTTTT Daci_1714 1906105 - 1907436 + | outer membrane efflux protein Daci_1715 1907453 - 1908823 + | RND family efflux transporter MFP subunit TERM 1488 1909309 - 1909299 - g 76 -2.4 -4.7416 | GGAAAACGCCAAAAA GCCC GAT GGGT CTCCCTACACTCCTA Daci_1716 1908844 - 1912032 + | CzcA family heavy metal efflux protein TERM 1489 1912020 - 1912049 + F 76 -8.7 -4.12188 | gap 1, overlap 1912003 GTCCTCTGGCGAGGT GGCGATCG-TGT AACTGGG ACAGCGATCGCC TTTTACAGGTCATGG TERM 1490 1912057 - 1912079 + F 100 -11.3 -5.71712 | CGATCGCCTTTTACA GGTCATGGC TTAAT GCCATGGCC TTTTTTTGTGTCAAC TERM 1491 1912123 - 1912140 + F 74 -3.3 -4.85599 | TGTCACTGCAATGTG TGCGTCC TGTG GGGGGCA TTTTTCTACAGTAGA Daci_1717 1912221 - 1912571 + | hypothetical protein TERM 1492 1912715 - 1912663 - f 76 -6.4 -4.52589 | gap 2, opp_overlap 1912672, overlap 1912671 GTCGCGCATAGAAAA GCAGATTATGCCTTCCTCTTTAGAAC AAC GTTCTCTTGAGGAAGGC-TT-TCTGC GTTTGGCTCAAGCAA TERM 1493 1912672 - 1912708 + G 83 -12.3 -4.02534 | opp_overlap 1912671 1912663 AGAAAAGCAGATTAT GCCTTCCTCTTTAGAAC AAC GTTCTCTTGAGGAAGGC TTTCTGCGTTTGGCT Daci_1718 1912670 - 1914436 + | sulfatase Daci_1719 1914538 - 1914927 + | flagellar basal-body rod protein FlgB Daci_1720 1914956 - 1915231 + | hypothetical protein TERM 1494 1915525 - 1915554 + G 70 -3.5 -4.47328 | gap 1 ACTAGTTCAAGCAGC TGGCTCCA-GGATC ACC GACCGATGGGGCCA TTTTCTGCTCGAGTT TERM 1495 1915943 - 1915913 - g 72 -4.1 -4.65895 | opp_overlap 1915933 1915936 GTGGTCATTGAAAAA TTTGTAGCCAA TGCACCATC TTGGCTACCAA TTAGCTGCTTCGTAT TERM 1496 1915955 - 1915966 + G 86 -3 -5.18357 | CCAATTAGCTGCTTC GTAT TAGC ATAC TTTTTTGGTGGATTC Daci_1721 1915304 - 1917772 + | heavy metal translocating P-type ATPase TERM 1497 1917800 - 1917821 + F 70 -10.1 -3.51032 | opp_overlap 1917800 ACATAGTCTGAAAAA CTGGCCCTT CGAT ACGGGCCAG TTCTAATTGGGGCAT TERM 1498 1917821 - 1917800 - f 89 -10.1 -4.61633 | opp_overlap 1917800 ACATAGTCTGAAAAA CTGGCCCTT CGAT ACGGGCCAG TTCTAATTGGGGCAT TERM 1499 1918432 - 1918418 - gf 73 -10 -3.61268 | opp_overlap 1918424, overlap 1918410 TACCTAATGGTTAAA CCATCG TAC CGATGG CTGGGCCTCGCCATT Daci_1722 1917869 - 1918630 + | hypothetical protein Daci_1723 1918605 - 1919018 + | diacylglycerol kinase TERM 1500 1919042 - 1919022 - T 100 -15.5 -4.8622 | opp_overlap 1919022 CTTTTCAATTAAAAA TAGCCCACC TAC GGTGGGCTA TTTTTTAGATGGCAG TERM 1501 1919022 - 1919042 + T 100 -15.5 -5.08824 | opp_overlap 1919022 CTTTTCAATTAAAAA TAGCCCACC TAC GGTGGGCTA TTTTTTAGATGGCAG Daci_1724 1919389 - 1919063 - | hypothetical protein TERM 1502 1919440 - 1919415 - R 100 -14.1 -5.60993 | opp_overlap 1919415 TTTCCTATAAAAAAA TGCCATGGAGC GCTA ACTCCATGGCA TTCACTGTAACCGAG TERM 1503 1919415 - 1919440 + r 76 -13.4 -3.12351 | opp_overlap 1919415 TTTCCTATAAAAAAA TGCCATGGAG CGCTAA CTCCATGGCA TTCACTGTAACCGAG Daci_1725 1920569 - 1919523 - | porin Daci_1726 1922318 - 1921980 - | transposase, IS4 family protein Daci_1727 1922803 - 1922378 - | putative TIS1421-transposase orfA protein Daci_1728 1922898 - 1923305 + | hypothetical protein TERM 1504 1923307 - 1923286 - f 74 -3.7 -4.86385 | overlap 1923287 AGGTGCAAAAAGAAA TCCTAAAAG AATC CTTCTAGGT GCAAATGTATAAATG TERM 1505 1923615 - 1923601 - g 93 -7.2 -5.10064 | TTTAAGAGATAAAAA GACATT ATC AATGTC GCGTATCAAAAACAA TERM 1506 1923770 - 1923784 + G 70 -4.2 -4.49337 | GGTAAGAGACTTGAC CTAACC AAA GGTGAG TTTTCGTTGCTATTG Daci_1729 1923320 - 1924051 + | winged helix family two component response transcriptional regulator Daci_1730 1924567 - 1924184 - | hypothetical protein Daci_1731 1925076 - 1924663 - | hypothetical protein Daci_1732 1926368 - 1925073 - | chloride channel core TERM 1507 1925333 - 1925322 - G 73 -7.2 -4.20749 | overlap 1925323 GAATACTGCAACAAA GCCG ATGG CGGC CATGAGCGCGAACGG TERM 1508 1926463 - 1926482 + H 76 -9.2 -4.07568 | overlap 1926478 TTCTGTAGGCGTCAT CAGCCGCA CTAG TGCGGCGG TTTTAGAGGCACGCC Daci_1733 1926719 - 1926913 + | putative TIS1421-transposase orfA protein Daci_1734 1927084 - 1927506 + | transposase, IS4 family protein TERM 1509 1927550 - 1927529 - g 76 -2.9 -4.8083 | opp_overlap 1927543 1927546 1927546 1927549 CAAGAGTACTAAAAA CCGCGAC TACGTCCT GCCGCAG GGAGCAGAACTCCCG Daci_1735 1927503 - 1928957 + | AAA ATPase Daci_1736 1929097 - 1929798 + | hypothetical protein Daci_1737 1931439 - 1930387 - | hypothetical protein Daci_1738 1931589 - 1931933 + | hypothetical protein Daci_1739 1932026 - 1933228 + | outer membrane efflux protein Daci_1740 1933225 - 1933809 + | hypothetical protein Daci_1741 1933806 - 1934915 + | hypothetical protein Daci_1742 1934933 - 1938064 + | CzcA family heavy metal efflux protein Daci_1743 1938131 - 1938505 + | hypothetical protein Daci_1744 1939359 - 1938874 - | hypothetical protein Daci_1745 1941514 - 1939343 - | GCN5-related N-acetyltransferase TERM 1510 1939498 - 1939518 + g 79 -5.4 -4.74103 | overlap 1939502 GTTTTCTAAGGTTGC TGAAGGCC ACGAC GGCCTTGA TTTTTGACTTGCCGA TERM 1511 1940138 - 1940164 + g 83 -8.8 -4.59853 | CGCCTGCTGGGGAGC GAGGTTCAGC CGAATGC GTTGAACCTC TTTTTCAGCCCTTCC Daci_1746 1942457 - 1942693 + | hypothetical protein Daci_1747 1942764 - 1943264 + | hypothetical protein TERM 1512 1943415 - 1943403 - T 73 -9.1 -3.95073 | opp_overlap 1943412, overlap 1943407 GGTCACATCCACAAA GGCAG CGA CTGCC GCATCTGCCGCGTTG Daci_1748 1943852 - 1943613 - | integrase, catalytic region Daci_1750 1944274 - 1944074 - | transposase IS3/IS911 family protein Daci_1751 1946502 - 1944652 - | AYP/GTP-binding protein TERM 1513 1945011 - 1945025 + g 71 -2.8 -4.64844 | GGTAGTTCGACGCAC TGCC AATGTCC GGCA TTTTCTCTGTCTGCG Daci_1752 1946954 - 1946499 - | hypothetical protein Daci_1753 1948228 - 1946951 - | hypothetical protein TERM 1514 1947233 - 1947220 - G 71 -2.3 -4.58283 | overlap 1947222 CAACTTGCCCAAAAA GTCCG CGGT CGCAC AGTTCCTCGATGAAG TERM 1515 1947891 - 1947864 - G 73 -7.7 -4.18401 | gap 1, opp_overlap 1947858 GTATATATTCGAAAA CCGACCTCGCCG TGCTG CGGC-AGTTCGG GTAACGCTTTAAGCC Daci_1754 1948429 - 1949589 + | integrase catalytic region Daci_1755 1951898 - 1949763 - | XRE family transcriptional regulator TERM 1516 1950280 - 1950309 + g 86 -12.1 -4.17048 | AGGCTGTCATGCACG TGCCGCGTTGTGC TCTT GGGCAGCGCGGCA TTGTTTTCGAGCCAA TERM 1517 1950590 - 1950612 + g 79 -7.6 -4.41494 | overlap 1950592 CCTCGCGACCTTCCG CCGCGTCCTG GAC CAAGACGCCG TTTTCCTTGACCATC TERM 1518 1952143 - 1952132 - R 73 -4.4 -4.69027 | AAACTTAGTGAAAAA CTTC TGGT GAAG TTCAAAACTGAGCGA Daci_1756 1953035 - 1952247 - | IclR family transcriptional regulator TERM 1519 1953155 - 1953174 + H 71 -9.2 -3.72363 | opp_overlap 1953149 AAGGGAAATGCAGCC GCAGGCTC TGGC GCGCCTGC TTTGGAATTTCACTG TERM 1520 1954254 - 1954244 - g 78 -8.2 -4.26076 | GCAGGCCGAGGAAAA GCGC TGG GCGC AGATCGTCAAGCAAA Daci_1757 1953312 - 1954289 + | hypothetical protein Daci_1758 1954323 - 1955114 + | enoyl-CoA hydratase/isomerase TERM 1521 1955214 - 1955193 - g 83 -8.7 -4.62069 | gap 1 CGCCGACCTGAAAAA GACCAC-GGG CCG CCCGGTGGCC TACCTGCAAAAGCAC Daci_1759 1955119 - 1957221 + | CoA-binding domain-containing protein TERM 1522 1958260 - 1958240 - g 73 -7.5 -4.18018 | opp_overlap 1958240 TCCTGCGACGGAAAA CGAAGCCCG CTT CAGTCTTCG TTTCGTGGTGGCCAC Daci_1760 1957293 - 1958630 + | MmgE/PrpD family protein Daci_1761 1960648 - 1958666 - | acetate--CoA ligase Daci_1762 1961666 - 1960755 - | (acyl-carrier protein) S-malonyltransferase TERM 1523 1961256 - 1961308 + g 70 -14.6 -2.78384 | gap 1, opp_overlap 1961253 CGTCTCCAGCAAGGC GGCCATGCGTGCGGGCGGCAGGCCG CTGA CGGCCAGCAGTCCGC-CGCCGGGCA TCTGCTGCGAGCAGC Daci_1763 1962523 - 1961663 - | triphosphoribosyl-dephospho-CoA synthase Daci_1764 1963233 - 1962520 - | holo-ACP synthase, malonate decarboxylase-specific Daci_1765 1963931 - 1963230 - | malonate decarboxylase, gamma subunit TERM 1524 1963609 - 1963563 - G 72 -13.7 -3.16564 | gap 2, overlap 1963589 GCCCGAGGTGATGAA GCCGCC-CGACAGC-GCCTGGTC ATA GACCAGGCCGATGACGCGGTGGC CCCGGCGCCGTGCCA Daci_1766 1964854 - 1963937 - | malonate decarboxylase subunit beta Daci_1767 1965183 - 1964851 - | malonate decarboxylase acyl carrier protein Daci_1768 1966876 - 1965194 - | malonate decarboxylase, alpha subunit TERM 1525 1965313 - 1965347 + g 74 -13.6 -3.30124 | gap 1 GGTCGATGCCCAGGT CCTGCG-GACGGCGG ATCACC CCGCGGTCGCGCAGG TTCTCCACCATGCGA TERM 1526 1966812 - 1966849 + g 100 -20.5 -3.66178 | gap 1 CGCGGCCCGAGGGCG GCCCGGGCGCGCGCCAGC CTG GC-GGCGCGCTCCCCGGC TTTGAGGTTCCAGGA Daci_1769 1968315 - 1966942 - | dicarboxylate carrier MatC domain-containing protein TERM 1527 1967358 - 1967395 + g 75 -8.3 -4.14392 | gap 1 TGACACCCACGATGA GCATGATCTCGGGCCAGG ACA CCTGGCCC-AGCGCGCGC TTTTGCAGGTTGGGC Daci_1770 1969397 - 1968483 - | LysR family transcriptional regulator Daci_1771 1970653 - 1969499 - | alkanesulfonate monooxygenase Daci_1772 1971810 - 1970650 - | putative sigma54 specific transcriptional regulator TERM 1528 1971267 - 1971235 - G 73 -12 -3.53224 | gap 2 CAGGTCTTCGCGAAA GCGCCGC-GC-CGCCA CCT TGGTGTGCAGCGGCGC GCTGCTGGCCGCGAG Daci_1773 1973001 - 1971820 - | acyl-CoA dehydrogenase type 2 TERM 1529 1971969 - 1971943 - G 71 -11.5 -3.58533 | gap 1 CCAGAAGCGGTCAAA GCGCAGCGCCGC GTGC GTGGCGC-GCGC GCCCGTGGCCTCGAA Daci_1774 1973627 - 1972998 - | FMN reductase TERM 1530 1973405 - 1973454 + g 78 -14.2 -3.61398 | gap 1, opp_overlap 1973404 1973403 CGACGATGAGGAAGT CGGCCTGCTCGATGGCCTCGATG GCCTG CAGCGTGGCCGGCG-GCAGGTCG TTCTTGGACAGGGCC Daci_1775 1975209 - 1973899 - | acyl-CoA dehydrogenase type 2 TERM 1531 1975273 - 1975227 - R 100 -21.7 -3.84451 | CTTTGCAAATTCAAA GGCCCGCCAACCCGGCC-TGCCT GCA AGGCAGGGCCGGGCCA-CGGGCC GGTGGGGAGAGGGGG Daci_1776 1976726 - 1975362 - | DszA family monooxygenase Daci_1777 1977576 - 1976752 - | NLPA lipoprotein Daci_1778 1978879 - 1977602 - | acyl-CoA dehydrogenase type 2 Daci_1779 1980177 - 1978885 - | acyl-CoA dehydrogenase type 2 TERM 1532 1979668 - 1979629 - G 95 -15 -4.25104 | gap 1 GCCCGTGGAGTAAAA GCGCG-TGCCGCTGACG CGCAGGC CGCCTGCGGCATCGCGC GACAGGCGCGCCGTG Daci_1780 1980923 - 1980261 - | binding-protein-dependent transport systems inner membrane component Daci_1781 1982088 - 1980895 - | ABC transporter related TERM 1533 1981488 - 1981516 + gr 80 -10.1 -4.07568 | overlap 1981489 1981491 TCTCGGGGTCGGTGG CCAGGGCGCGGGC AAT GCCCACGCGCTGC TTTTGCCCGCCCGAC TERM 1534 1981489 - 1981515 + gr 76 -13.6 -3.04398 | overlap 1981488 1981491 CTCGGGGTCGGTGGC CAGGGCGCGGGC AAT GCCCACGCGCTG CTTTTGCCCGCCCGA TERM 1535 1981561 - 1981584 + gr 72 -13.8 -2.60496 | overlap 1981560 1981558 GGTGCCAGCCTTCTC CTGCAGGCCC ACCA GGGCCAGCAG CTCTTTCACCCGCGC Daci_1782 1982918 - 1982112 - | NLPA lipoprotein Daci_1783 1983759 - 1982965 - | NLPA lipoprotein TERM 1536 1983280 - 1983268 - G 70 -9.1 -3.87815 | opp_overlap 1983268 TTCGATCTCGACAAA GCGCA GCT TGCGC GGGTTGGACACGATG Daci_1784 1984620 - 1984048 - | MarR family transcriptional regulator TERM 1537 1984698 - 1984726 + H 73 -9.7 -3.90744 | opp_overlap 1984697 1984700 ACGGCTTTCATATAT TACGCTTTATGTA TAG TACGTTAAGCGTA TTATTTGGCGGCACA Daci_1785 1984762 - 1985220 + | glyoxalase/bleomycin resistance protein/dioxygenase TERM 1538 1985364 - 1985385 + G 78 -5.7 -4.56133 | CTCGGTGGACGGGGA CGGCACGGT CAAC GTCGCGCCG TTTTCCTTCTTCAAC Daci_1786 1985260 - 1985946 + | flavoprotein oxygenase DIM6/NTAB family-like protein Daci_1787 1985957 - 1986760 + | 2-oxo-hepta-3-ene-1,7-dioic acid hydratase TERM 1539 1986871 - 1986829 - f 93 -17.2 -3.28712 | gap 3 GCGCGTCGCCGACAA TGCAGCGGCGCCGCCCGC-CA CCGG TGCGCGGGCGGCG--GCTGCA ACACATGCACTACAG Daci_1788 1986899 - 1987669 + | short-chain dehydrogenase/reductase SDR Daci_1789 1988866 - 1987688 - | AraC family transcriptional regulator TERM 1540 1989032 - 1989016 - g 74 -13.7 -3.31461 | CATCGATGCCGACAA CGGCCAG GTG CTGGCCG ATGCGCTGGGCGAGG Daci_1790 1988888 - 1989679 + | short chain dehydrogenase TERM 1541 1990849 - 1990890 + G 70 -15.1 -2.72043 | gap 1, overlap 1990849 GCCCCATGTGCTCAA GCTGCTGGCCAGCGCGGGCA CGC TGGCACCGCTGGCCAGC-GC CTTTGCCAACGGGTT TERM 1542 1990849 - 1990891 + G 78 -14 -3.53761 | overlap 1990849 GCCCCATGTGCTCAA GCTGCTGGCCAGCGCGGGCA CGC TGGCACCGCTGGCCAGCGCC TTTGCCAACGGGTTC Daci_1791 1989716 - 1991011 + | putative dehydrogenase/oxygenase subunit (flavoprotein) TERM 1543 1991116 - 1991172 + G 80 -18.1 -2.86747 | overlap 1991152 CAGTTCACCACGGGC G-TGACCGTCATCACCACGCGCGCGCC GGACG GGCG-GCGCGTGGGCATGACGGCCAAC TCGTTCTCCTCGGTC TERM 1544 1991200 - 1991246 + G 73 -12.9 -3.53012 | gap 1, overlap 1991196 1991201 GTCTCGCTGGACCCG CCGCTGGTGCTGTGGAGCCTGG CGCG CCAGGCGCC-CAGCGTCTGCGA TTTCCAGGGCGCCAG TERM 1545 1991201 - 1991245 + G 74 -16.4 -2.71712 | gap 1, overlap 1991196 1991200 TCTCGCTGGACCCGC CGCTGGTGCTGTGGAGCCTGG CGCG CCAGGCGCC-CAGCGTCTGCG ATTTCCAGGGCGCCA Daci_1792 1991026 - 1991553 + | flavin reductase domain-containing protein TERM 1546 1991581 - 1991569 - f 83 -4.7 -5.14563 | opp_overlap 1991569 CGGGTCATGAAAAAA GCGGC ACC GCAGC TTTCCCCACCCTTTG Daci_1793 1991614 - 1992849 + | carboxymethylenebutenolidase Daci_1794 1992928 - 1993557 + | MarR family transcriptional regulator Daci_1795 1993550 - 1994383 + | hypothetical protein Daci_1796 1994402 - 1995427 + | 2-dehydropantoate 2-reductase Daci_1797 1995480 - 1995878 + | CutA1 divalent ion tolerance protein Daci_1798 1996854 - 1995865 - | hypothetical protein TERM 1547 1997066 - 1997050 - R 100 -13.7 -5.14965 | opp_overlap 1997050 ATGCCCATGAAAAAA GGAGCGC AGC GCGCTCC TTTGGGTGGTGGTGT TERM 1548 1997050 - 1997066 + r 88 -13.7 -3.6959 | opp_overlap 1997050 ATGCCCATGAAAAAA GGAGCGC AGC GCGCTCC TTTGGGTGGTGGTGT Daci_1799 1998313 - 1997093 - | signal recognition particle-docking protein FtsY TERM 1549 1998241 - 1998290 + g 84 -4.7 -5.06414 | gap 1, opp_overlap 1998269, overlap 1998225 TGCCGGCCTTTTCAG GCGCGGCGCTGCTGTCCGCCGGGG AAA TCTCGGCGG-CGGAGGGGGTGGGC TTTTTCTTGAAAAAA TERM 1550 1998384 - 1998416 + G 70 -15.6 -2.76171 | gap 1, overlap 1998383 1998385 1998410 TTAATGGCCTGCATG GGCA-CCGGGGCTGC TTTG GCAGCCCCGGATGCA TCCTCTTCCATCCCT Daci_1800 1998342 - 1999820 + | peptidase M16 domain-containing protein TERM 1551 2000125 - 2000173 + G 76 -13.2 -3.53012 | gap 2, opp_overlap 2000137 2000138 GGGCGATGCGCCTGC GCTGG-A-CGAGAACGGCCTGGGC CAG GCCTGGGCCGATCTGGGTGCCAGC TTTGGCGCGCAGGCG TERM 1552 2000354 - 2000393 + G 74 -14.9 -3.01924 | gap 1, opp_overlap 2000346 2000345 AAGGAATCGGACACG CGCCCCGGCACGGTGGCC GGCAA GGCC-CTGAGCCAGGGCG TGTTCGGCACCCATC Daci_1801 1999847 - 2001208 + | peptidase M16 domain-containing protein Daci_1802 2001205 - 2001915 + | methyltransferase Daci_1803 2002032 - 2002547 + | pantetheine-phosphate adenylyltransferase Daci_1804 2003786 - 2002665 - | hypothetical protein TERM 1553 2003925 - 2003908 - R 100 -12.7 -5.14563 | opp_overlap 2003908 CCCTGGATGAAAAAA GGCCGGA AGTC TCCGGCC TTGTACTTGGATCAG TERM 1554 2003908 - 2003925 + r 79 -12.7 -3.52652 | opp_overlap 2003908 CCCTGGATGAAAAAA GGCCGGA AGTC TCCGGCC TTGTACTTGGATCAG Daci_1805 2004279 - 2003959 - | transport-associated protein Daci_1806 2004748 - 2004359 - | hypothetical protein Daci_1807 2005237 - 2004860 - | hypothetical protein TERM 1555 2005277 - 2005297 + r 100 -13.9 -4.4261 | TGCTGCGCAAGGTCC GCTGCCCCC CGA GGGGGCTGC TTTTCATCTTGGGGC TERM 1556 2005331 - 2005357 + r 100 -15.9 -4.07687 | gap 1, opp_overlap 2005331 CCGGCGATGAAAAAA GCCCCTG-GCGC ATGG GCGCGCAGGGGC TTTTGCACGGCGGAT TERM 1557 2005357 - 2005331 - R 100 -15.9 -5.14563 | gap 1, opp_overlap 2005331 CCGGCGATGAAAAAA GCCCCTG-GCGC ATGG GCGCGCAGGGGC TTTTGCACGGCGGAT TERM 1558 2005392 - 2005407 + r 74 -6.8 -4.42386 | gap 1, overlap 2005362 CCGCTTCAGGCGGTG GCGACCG TAC CGG-CGC TTTTGTCCGTGGAAA Daci_1808 2006767 - 2005382 - | histidine kinase Daci_1809 2006905 - 2007537 + | two component LuxR family transcriptional regulator TERM 1559 2007591 - 2007556 - T 73 -4.6 -4.68724 | opp_overlap 2007560, overlap 2007558 2007559 TCAGTCAATAGAAAA TACGGGCTGCACGATT ATCA AGTCGTGCAGCCTTTT TCTTTGGTGAAAAAT TERM 1560 2007560 - 2007587 + T 100 -16.4 -5.33405 | opp_overlap 2007559 2007558 2007556 TCAATAGAAAATACG GGCTGCACGATT ATCA AGTCGTGCAGCC TTTTTCTTTGGTGAA Daci_1810 2008054 - 2007626 - | response regulator receiver protein TERM 1561 2008123 - 2008150 + r 77 -12 -3.61398 | overlap 2008121 TGCCAGTGAGGGATC GGCGTGGGGGTC AGCC GATTCCTACGCC TTGTTACCGCAAACG Daci_1811 2008896 - 2008144 - | UBA/THIF-type NAD/FAD binding protein TERM 1562 2008919 - 2008937 + r 74 -13.1 -3.14132 | opp_overlap 2008919, overlap 2008934 TCCAGACGTGAAAAA GCCGGGC GCAAG GCCCGGC TTGGTGCAGGCGCGG TERM 1563 2008937 - 2008919 - R 100 -13.1 -4.64766 | opp_overlap 2008919 2008934 TCCAGACGTGAAAAA GCCGGGC GCAAG GCCCGGC TTGGTGCAGGCGCGG TERM 1564 2008934 - 2008976 + r 78 -6.9 -4.59414 | gap 2, opp_overlap 2008919, overlap 2008919 2008939 2008939 GCCGGGCGCAAGGCC CGGCTTGGTGCAGGCGCGGAC CCG GTCCGCGCC-GCGCTGT-CAG TTTTCCTTCTTCTCG TERM 1565 2008939 - 2008972 + r 77 -15.3 -2.82152 | gap 1, overlap 2008934 2008939 GCGCAAGGCCCGGCT TGGTGCAGGCGCGGAC CCG GTCCGCGCC-GCGCTG TCAGTTTTCCTTCTT Daci_1812 2010409 - 2008973 - | carboxyl-terminal protease TERM 1566 2009187 - 2009210 + g 82 -11.8 -4.11216 | gap 1, overlap 2009191 TCGTCCTTGACCTCG GCACCCTGTCC GCT GGACA-GGTGC TTTTCCAGGTCGGCC TERM 1567 2010182 - 2010224 + g 73 -12.1 -3.40403 | gap 1, opp_overlap 2010196, overlap 2010185 CTGCGAATGCGGATC GAGGCTGGACACC-ATGCCG GAGA TGGCATCGGTGATCAGCTTC TTGTCATCGACCGGC TERM 1568 2010185 - 2010221 + g 73 -10.2 -3.84406 | gap 1, opp_overlap 2010196, overlap 2010182 CGAATGCGGATCGAG GCTGGACACC-ATGCCG GAGA TGGCATCGGTGATCAGC TTCTTGTCATCGACC Daci_1813 2011274 - 2010531 - | phosphoglycerate mutase 1 family protein TERM 1569 2011736 - 2011714 - g 72 -6.9 -4.25104 | gap 1, overlap 2011700 2011715 GCTGGGCTACGAAAA GGCC-CAGGC CCTG GCCGGTGGCC TGAAGGCCTGGCGCG Daci_1814 2011373 - 2011780 + | rhodanese domain-containing protein Daci_1815 2011869 - 2012126 + | glutaredoxin 3 TERM 1570 2012157 - 2012187 + F 100 -16.3 -4.76123 | gap 1, opp_overlap 2012146, overlap 2012146 TAATGCTGGCCCAGG TGCCCGCTGCGCAA GCTC TTG-GCAGCGGGCA TTTTGTTGGTGATTT TERM 1571 2012211 - 2012230 + G 91 -9.3 -5.00616 | GTGATTTTTTTGATG CCCTGGT CACCGA ACCAGGG TTTTTTGCCCAGAAA Daci_1816 2012208 - 2012711 + | protein-export protein SecB TERM 1572 2012777 - 2012792 + F 100 -10.4 -5.52384 | opp_overlap 2012777 2012772 TGTGGTACAAGAAAA GAGGCC CGAG GGCCTC TTTTTTTCATCAACG TERM 1573 2012792 - 2012777 - f 100 -10.4 -4.77165 | opp_overlap 2012777, overlap 2012772 TGTGGTACAAGAAAA GAGGCC CGAG GGCCTC TTTTTTTCATCAACG Daci_1817 2012832 - 2013842 + | glycerol-3-phosphate dehydrogenase (NAD(P)(+)) TERM 1574 2013897 - 2013917 + T 77 -8.1 -4.4261 | overlap 2013898 TGCTGCTCAAGGTCC ACTGCCCCC CGA GGGGGCCGC TTTTCATCTTGGGGC TERM 1575 2013950 - 2013975 + T 100 -19.7 -5.47218 | opp_overlap 2013950 CCCGGCGATGAAAAA GCCCCGGGGCT GGAA GGCCCCGGGGC TTTTTTTGCGTCAGA TERM 1576 2013975 - 2013950 - T 100 -19 -4.72272 | opp_overlap 2013950 CCCGGCGATGAAAAA GCCCCGGGGC TGGAAG GCCCCGGGGC TTTTTTTGCGTCAGA Daci_1818 2015317 - 2014022 - | diaminopimelate decarboxylase Daci_1819 2015390 - 2016319 + | LysR family transcriptional regulator Daci_1820 2016554 - 2016342 - | hypothetical protein Daci_1821 2017451 - 2016600 - | pantoate--beta-alanine ligase TERM 1577 2016977 - 2017002 + g 72 -3.9 -4.56597 | GCTCGACCATGCGGC GGATCACCATC AACT GCTGGTAGTCC TTTTTGCCGAACACG Daci_1822 2018391 - 2017510 - | 3-methyl-2-oxobutanoate hydroxymethyltransferase TERM 1578 2018064 - 2018117 + g 74 -15.9 -2.78935 | gap 1 CATAGGGCATGTCGG CGATCAGCCAGGC-CGTGCCCTGCAC GCG GTGCAGGCCGCGCGCCACGCTGGCCG TGTGGTAGCACATGT Daci_1823 2020041 - 2018479 - | hypothetical protein TERM 1579 2018934 - 2018923 - G 82 -5.8 -4.74801 | overlap 2018928 CAAGGCGAGGAAAAA GCCA ACGC TGGC GGCCGCCAGCAACTG Daci_1824 2021112 - 2020045 - | ABC transporter related Daci_1825 2021347 - 2022156 + | cyclic nucleotide-binding protein Daci_1826 2022348 - 2022689 + | hypothetical protein TERM 1580 2022702 - 2022726 + F 74 -12.1 -3.14344 | opp_overlap 2022700, overlap 2022704 TGATGTGAATGGATA TGGGTCCGGCA TGG TGCCGGGCCTG TTGGTGGAAAGCGTC TERM 1581 2022704 - 2022724 + F 82 -14.7 -3.13403 | opp_overlap 2022700, overlap 2022702 ATGTGAATGGATATG GGTCCGGCA TGG TGCCGGGCC TGTTGGTGGAAAGCG TERM 1582 2022762 - 2022777 + F 100 -11.8 -5.65927 | GGGATGCTTGGTTTG GCGCCC TTCG GGGCGC TTTTTTGTTTCCCTC TERM 1583 2023529 - 2023502 - f 74 -12.6 -3.14344 | CACGCGCCCCATGAA GGGCACGGCGCC GCGT GGCGCCACGCCT GAACAGGACGAGGCG TERM 1584 2024348 - 2024388 + F 70 -9.9 -3.54424 | gap 3, overlap 2024351 CTGGCGCTGGCCGCC CG-GCCCA-TCGCCAATGCG GTGG CGCAT-GGCGACTGGGTGCG TTTCAAGACCTCGCG Daci_1829 2024831 - 2025814 + | hypothetical protein TERM 1585 2025857 - 2025839 - T 95 -11.7 -4.72272 | opp_overlap 2025839 CGCCGCCATGAAAAA CGCCTCG CTCCC CGAGGCG TTTTTTCATTCGGGC TERM 1586 2025839 - 2025857 + T 100 -11.7 -5.26875 | opp_overlap 2025839 CGCCGCCATGAAAAA CGCCTCG CTCCC CGAGGCG TTTTTTCATTCGGGC Daci_1830 2026501 - 2025863 - | DTW domain-containing protein Daci_1831 2026876 - 2026517 - | 5-carboxymethyl-2-hydroxymuconate isomerase Daci_1832 2028125 - 2026908 - | 8-amino-7-oxononanoate synthase TERM 1587 2028014 - 2027979 - G 72 -9.1 -4.08767 | overlap 2027980 GTCATTGCTGCAAAA GGCCAGCATGG-GGTGG CCGT CCACCTCCATG-TGGGC GCCGCTGGCGGCGCC Daci_1833 2028823 - 2028122 - | dethiobiotin synthase TERM 1588 2028661 - 2028698 + g 85 -17 -3.14132 | gap 1 CCTCGTTGGCCCAGC CGCCGTGGCCGTCGGGC TCGGC GCCTG-CGGCCACGGCC TTCATGCCCACCACG Daci_1834 2030142 - 2028820 - | adenosylmethionine-8-amino-7-oxononanoate aminotransferase Daci_1835 2030550 - 2030170 - | aspartate alpha-decarboxylase Daci_1836 2031057 - 2030692 - | 6-pyruvoyl tetrahydropterin synthase/hypothetical protein TERM 1589 2031082 - 2031066 - R 78 -6.5 -4.62336 | opp_overlap 2031065 ACTGCATGGCAAAAA TCAGCGG ATG CCGGTGA GCTTGTGGGTCTGCA Daci_1837 2031704 - 2031066 - | hypothetical protein Daci_1838 2032657 - 2031764 - | chromosome segregation and condensation protein ScpA Daci_1839 2032909 - 2032706 - | hypothetical protein TERM 1590 2032798 - 2032838 + g 75 -4.6 -4.56133 | opp_overlap 2032803 2032805, overlap 2032801 CGTCCTTGTCCCACA GCAGAGAGC-GGCCGGCCAG TTG CTGGCTGGGCAGCTCGG-GC TTTTGCTTCTTCAGG Daci_1840 2032956 - 2033453 + | putative lipoprotein TERM 1591 2033579 - 2033595 + G 83 -15.1 -3.54543 | CATGGGTACGGTGAA GGCCCCG AAC CGGGGCC TTTGCGACGATAGAT Daci_1841 2033565 - 2034278 + | hypothetical protein Daci_1842 2034577 - 2034281 - | hypothetical protein TERM 1592 2034554 - 2034528 - G 100 -12.2 -4.92385 | CACAGGCAAAGAAAA GCCCCCAGGGCC GGG GACCGTGAGGGC TTGCGGGACTTTGCA Daci_1843 2036866 - 2034713 - | methionyl-tRNA synthetase TERM 1593 2035416 - 2035442 + g 70 -12.3 -3.29144 | gap 1, overlap 2035417 CACAGCTGCATGATT TCGCG-CACGGC GCGG GCCGTGTCGCGG TTCTCGAAGGCCTGG Daci_1844 2038157 - 2036919 - | patatin Daci_1845 2038786 - 2038214 - | restriction endonuclease Daci_1846 2038913 - 2040004 + | hypothetical protein TERM 1594 2040052 - 2040076 + G 82 -15.7 -3.53012 | opp_overlap 2040068 CCTCGATGCGGTATC TGGCGGCGCTC AAC GAGCACCGCCA TTTCGGCCGCGCGGC TERM 1595 2040325 - 2040270 - g 72 -13.9 -3.14132 | gap 2, opp_overlap 2040293, overlap 2040255 2040274 GGCCTGCGCCAGGAA CTGAGCGCCGCCGCC-GGCGC-GCTGC GCGG GCAGCTGCGCATGGCGGCCGTGCCCAC GGCCATGCCCATGCT TERM 1596 2040308 - 2040274 - g 82 -20.6 -2.56596 | opp_overlap 2040293, overlap 2040255 2040270 TGCGCCAGGAACTGA GCGCCGCCGCCGGCGC GCT GCGCGGGCAGCTGCGC ATGGCGGCCGTGCCC Daci_1847 2040024 - 2040992 + | LysR family transcriptional regulator TERM 1597 2041023 - 2040989 - T 74 -6.3 -4.56597 | gap 1, opp_overlap 2041001, overlap 2040992 2040993 GGGGGCGCTGAAAAA CTAGGCCGGCTGTGCC CGCT GGC-CTGCCAGCGCAG TCTCTGGCGTGGCGT Daci_1848 2043331 - 2040989 - | aldehyde oxidase and xanthine dehydrogenase molybdopterin binding TERM 1598 2041526 - 2041565 + g 81 -9.8 -4.25104 | gap 1, overlap 2041529 GCCGCGCCCGTGCAG CAGGCCGTCGGCGCCGGGG CGG CCCCGGCTTCC-CGGCTGG TTTTGCTGCCAGCCC Daci_1849 2044134 - 2043439 - | isochorismatase hydrolase Daci_1850 2045216 - 2044131 - | hypothetical protein TERM 1599 2044663 - 2044638 - G 80 -16.9 -3.21747 | gap 1 CCAGGTCAGCACGAA GCCGCTGGG-CC AGT GGTCCCAGCGGC CGGGCTGGTCCACGA Daci_1851 2046118 - 2045267 - | alpha/beta hydrolase fold Daci_1852 2046918 - 2046130 - | Asp/Glu/hydantoin racemase TERM 1600 2047135 - 2047116 - H 73 -5 -4.62069 | opp_overlap 2047093 CGTCGATTTGAAAAA TTCAAGCG CATA CACCTGAA TTAAGTGTTTTGTTG Daci_1853 2047242 - 2048399 + | monooxygenase FAD-binding Daci_1854 2048508 - 2049065 + | 2Fe-2S iron-sulfur cluster binding domain-containing protein TERM 1601 2049216 - 2049237 + G 70 -3.6 -4.3898 | overlap 2049206 CCATGGCCGGCGTGG TGGCTGCG GTGCAG CGCGGGCA TTTTCTGGGCGTGGT TERM 1602 2050418 - 2050428 + G 72 -8.2 -4.09685 | overlap 2050392 CGCCGGCTGCTGGGC GCGG CCC CCGC TTTTGACGACTGGGC Daci_1855 2049062 - 2052052 + | gluconate 2-dehydrogenase (acceptor) Daci_1856 2052406 - 2053722 + | major facilitator transporter TERM 1603 2053767 - 2053750 - f 95 -12.7 -4.27584 | opp_overlap 2053750 ACTTCGAATGGAAAA GGCCTGC GCAA GCAGGCC TTTTTTTTATGTCAA TERM 1604 2053750 - 2053767 + F 100 -12.7 -6.02914 | opp_overlap 2053750 ACTTCGAATGGAAAA GGCCTGC GCAA GCAGGCC TTTTTTTTATGTCAA Daci_1857 2053969 - 2054601 + | N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD Daci_1858 2054631 - 2055041 + | hypothetical protein Daci_1859 2055567 - 2055103 - | MarR family transcriptional regulator TERM 1605 2055164 - 2055146 - G 70 -4.4 -4.46212 | overlap 2055147 2055150 TTCTTGAGCAGAAAA TCCAGCGC CAG GCGCTCGG CCGGATTGAGCTTGC TERM 1606 2057520 - 2057510 - g 72 -8.2 -4.07568 | CGGCCTGGTGGAAAA GGCC TTC GGCC TGAGCCTGCGCGAGC Daci_1860 2055846 - 2058029 + | respiratory-chain NADH dehydrogenase domain-containing protein TERM 1607 2058773 - 2058740 - g 72 -5.9 -4.2558 | gap 1, overlap 2058742 CACGCTGCAGGAAAA GACCGTGACCGAGCTG GGC CAGGCCGGGCACAG-C GCCATCACCACCTGC TERM 1608 2058772 - 2058742 - g 71 -9.6 -3.73042 | overlap 2058740 CGCTGCAGGAAAAGA CCGTGACCGAGCTG GGC CAGGCCGGGCACAG CGCCATCACCACCTG TERM 1609 2059354 - 2059322 - g 100 -12.5 -4.72272 | CTCGCGCATGAAAAA GCGCCTGCGCGGCGA CGG CCGGCGTGCGGGCGC CAAGCTCATCGTCAT Daci_1861 2058042 - 2060978 + | formate dehydrogenase, alpha subunit Daci_1862 2060978 - 2061208 + | NAD-dependent formate dehydrogenase, delta subunit Daci_1863 2061765 - 2061229 - | GCN5-related N-acetyltransferase TERM 1610 2061633 - 2061663 + g 73 -10.5 -3.90744 | gap 1, opp_overlap 2061641 CCAGGACGAAGGTGC GCGCAAGATGCTCC TGAT GGAGCTTCTTG-GC TTCTTTGCGCAGAAA Daci_1864 2062961 - 2062077 - | LysR family transcriptional regulator TERM 1611 2063286 - 2063297 + G 77 -3.6 -4.77036 | overlap 2063285 GCCACGGGCGTGTTC GGCT ATGC GGCC TTTTTCCTGATGGGG Daci_1865 2063004 - 2063990 + | hypothetical protein Daci_1866 2065002 - 2064007 - | hypothetical protein Daci_1867 2066028 - 2065114 - | intradiol ring-cleavage dioxygenase Daci_1868 2067068 - 2066076 - | hypothetical protein TERM 1612 2066832 - 2066888 + g 73 -10.1 -3.85817 | gap 3, opp_overlap 2066817 2066866, overlap 2066813 GTCGGCGCCGATGTT GCCG-CCG-GCGCCGGGACGGTTC-TCG ATCA CGAAGGGCTGGCCCAGCGTGCGGCCGGC TTTCTCGCCCAGGGT Daci_1869 2067389 - 2067111 - | muconolactone delta-isomerase Daci_1870 2068605 - 2067418 - | muconate and chloromuconate cycloisomerase TERM 1613 2067989 - 2067973 - G 70 -9.3 -3.86822 | overlap 2067962 CAATTGCGGCAGAAA GCGCCGC GCC GTGGCGC CGTCCCAGGCCTGGT TERM 1614 2068084 - 2068120 + g 100 -13.2 -4.63218 | overlap 2068076 ATCGGCCTCAGGCGT GCGCGCGCCG-ATCTTCA TCT TGAAGATGCGGTG-GCGC TTTTGTTCCAGGCGC Daci_1871 2071308 - 2068780 - | PAS/PAC sensor signal transduction histidine kinase Daci_1872 2072253 - 2071333 - | extracellular solute-binding protein Daci_1873 2072624 - 2072253 - | response regulator receiver protein Daci_1874 2072738 - 2073376 + | response regulator receiver protein TERM 1615 2074011 - 2073974 - g 73 -7 -4.21936 | gap 2 CGCACAACCTCAAAA GCGTGCTGGGCCTGCTGG GGCA CGAGCAGGCC-AGCG-GC CTGGCGCAGACGCTG Daci_1875 2073373 - 2074140 + | response regulator receiver protein Daci_1876 2074432 - 2074235 - | hypothetical protein Daci_1877 2075616 - 2074429 - | PepSY-associated TM helix domain-containing protein TERM 1616 2074467 - 2074486 + g 71 -2.7 -4.56597 | overlap 2074454 GCGGCGCGGGCTGCG GGGCCGG CACGCT CTTGCCC TTTTTGACCCACAGG TERM 1617 2075611 - 2075595 - G 82 -15.1 -3.48276 | TTTTCTCTGACAGAA GGGGGCC TGG GGCCCCC GCCATCACCGCGCCC Daci_1878 2077839 - 2075671 - | TonB-dependent siderophore receptor TERM 1618 2076049 - 2076066 + g 70 -8.3 -3.95073 | GTTGAAGGCCGCGCT GGCCAGC AGGC GCAGGCC TTTCTGGATCTCGCC TERM 1619 2076367 - 2076391 + g 87 -17.1 -3.30441 | opp_overlap 2076363 2076360, overlap 2076367 2076368 CTTGAACACCACGCC GGCCAGCGGCG TCA CGGCGCTGGCC TTGTACAGCGTGGTG Daci_1879 2080440 - 2077915 - | TonB-dependent siderophore receptor TERM 1620 2078120 - 2078088 - G 71 -2.6 -4.57569 | gap 1, opp_overlap 2078108 2078118 GCAGCGCGTCAAAAA GCG-CATAGCCACCC TGGC GGGTGGTGACATCGC CCACGCTGGCGTAGG TERM 1621 2080500 - 2080511 + r 85 -2.2 -5.43866 | opp_overlap 2080483, overlap 2080484 TTGCCGATCCTGCAA GTTC GGCT GGAC TTTTTTTGCGCCTTG TERM 1622 2080523 - 2080544 + r 74 -3.5 -4.7629 | overlap 2080526 2080539 GGACTTTTTTTGCGC CTTGGCCTG GATT CGGGCCTTG TTTTTGCCTTCATCG TERM 1623 2080526 - 2080541 + r 79 -8.2 -4.47888 | overlap 2080523 2080539 CTTTTTTTGCGCCTT GGCCTG GATT CGGGCC TTGTTTTTGCCTTCA Daci_1880 2081574 - 2080591 - | AraC family transcriptional regulator TERM 1624 2080686 - 2080676 - G 78 -6.8 -4.56775 | opp_overlap 2080676, overlap 2080677 2080678 AGGTGCTTGGAAAAA CTGC GGC GCAG GGTGTCCGCGTTGGC Daci_1881 2081692 - 2082333 + | metal dependent phosphohydrolase Daci_1882 2083683 - 2082352 - | MmgE/PrpD family protein TERM 1625 2083330 - 2083308 - G 70 -14.9 -2.71731 | opp_overlap 2083325 2083326 CGTAGCCCGCAATCA CGGCCTGCA GCAAT TGCAGGCCG CTGGCCCTTTGCTGC TERM 1626 2084296 - 2084239 - g 82 -3.4 -5.00616 | gap 3, overlap 2084240 GCTGGCTGGAAAAAA GCTCATTTCTCTGGGCATGACCGAGCCCG ATG CAGGCTCGGCCGTGACC-GAGC--TGAGG ACCACGGCCACGCTG Daci_1883 2083883 - 2085049 + | acyl-CoA dehydrogenase domain-containing protein Daci_1884 2085090 - 2086061 + | hypothetical protein Daci_1885 2086070 - 2088196 + | CoA-binding domain-containing protein Daci_1886 2088190 - 2089044 + | alpha/beta hydrolase fold Daci_1887 2089054 - 2089941 + | LysR family transcriptional regulator Daci_1888 2091139 - 2089925 - | major facilitator transporter TERM 1627 2091082 - 2091056 - G 71 -11.4 -3.62046 | overlap 2091057 GGAGGCGGCGAAGAA GCTGCCCAGGCC GAA GGCCAGGACGGC CAGGCTGCGGCCGGG TERM 1628 2091281 - 2091266 - g 72 -8.2 -4.07885 | overlap 2091269 CATCCCTTTCCAAAA CAGGCG GTCC CGCCCG TCCCGGCGGACGCAG Daci_1889 2091235 - 2091822 + | TetR family transcriptional regulator Daci_1890 2093285 - 2091819 - | transcriptional regulator TERM 1629 2093014 - 2093001 - G 84 -9.5 -4.52589 | overlap 2093003 CCCCGCCACATAAAA GCCCG AGCC CGGGC GCGAGACGATCACCC Daci_1891 2093322 - 2094185 + | hypothetical protein Daci_1892 2095166 - 2094237 - | hypothetical protein TERM 1630 2094320 - 2094363 + g 77 -15.2 -3.16564 | gap 1 TGGCCGCCTCCAGCC GGCTGCGGATGGCCGGCGCGC GCA GCGCCTGGGCCA-CCGCAGCA TTGATGCGCTGGGCC Daci_1893 2096099 - 2095170 - | LysR family transcriptional regulator TERM 1631 2097032 - 2097000 - g 70 -12.6 -3.28712 | overlap 2096984 2096983 CCTGGCGCTGGACAA GCCCGCCGCCCAGC GCACG GCCGCGCAGCAGGC GAAGATCGACACCAT Daci_1894 2096245 - 2097633 + | hypothetical protein TERM 1632 2097932 - 2097907 - f 78 -14.1 -3.25223 | gap 1, overlap 2097911 GAGTCAGATCACGAA GCAAGCCTGTCC TCC GG-CAGGCTTGC AACCCCGCAACCGCC TERM 1633 2098081 - 2098100 + F 71 -7.8 -4.0162 | opp_overlap 2098075 2098071 CAATACAGAGGTGCG GCCCCC ACCTTGAA GGGGGC TTTGTCATGTCCAGA Daci_1895 2098107 - 2098682 + | hypothetical protein TERM 1634 2098730 - 2098684 - f 76 -13.6 -3.06302 | opp_overlap 2098680 ACGACGGCGAGTGAA CTGTGCGGCGTGCCCGTATCTC TGT GAGAAACTGGCCCGCCGAACAC CCCCTTGCCTTCACC Daci_1896 2098747 - 2099637 + | LysR family transcriptional regulator Daci_1897 2099883 - 2100260 + | hypothetical protein TERM 1635 2100293 - 2100315 + T 100 -19.2 -5.47218 | GCCGTGCCGGATCGA GCGGGCTCCA TCG TGGAGCCCGC TTTTTTTACATGGGC Daci_1898 2100677 - 2100321 - | hypothetical protein Daci_1899 2100802 - 2102970 + | 5'-nucleotidase domain-containing protein TERM 1636 2103030 - 2102985 - T 89 -18.6 -3.05463 | gap 1, opp_overlap 2102996, overlap 2102996 AGTTCCGGCAGGCAA GCAA-CAAAAAAGCCCCGTGC ATCTG GCACGGGGCTTTTTTGCTTGT GCCGAACGGGCTTCA TERM 1637 2103018 - 2102996 - T 100 -16.3 -5.5604 | opp_overlap 2102996, overlap 2102985 GCAAGCAACAAAAAA GCCCCGTGC ATCTG GCACGGGGC TTTTTTGCTTGTGCC TERM 1638 2102996 - 2103018 + T 100 -16.3 -5.32944 | opp_overlap 2102996 2102985 GCAAGCAACAAAAAA GCCCCGTGC ATCTG GCACGGGGC TTTTTTGCTTGTGCC Daci_1900 2103657 - 2103043 - | thioesterase superfamily protein Daci_1901 2103745 - 2104251 + | MarR family transcriptional regulator TERM 1639 2104605 - 2104619 + G 77 -4.2 -4.8048 | overlap 2104599 2104598 GTGACGCAGGCCACG CAGCTG TGG CATCTG TTTTTGCTGTGGAGC TERM 1640 2104807 - 2104844 + G 70 -12.8 -3.36289 | gap 2, overlap 2104792 2104790 2104834 TCGAGCACTGGGGCT GGCGCTCGGCCACGGTGC CGGT GT-TCGTGGCC-AGCGCC TTGATTGCCGTGCTG Daci_1902 2104287 - 2105570 + | major facilitator transporter Daci_1903 2106245 - 2105586 - | Smr protein/MutS2 TERM 1641 2105646 - 2105679 + g 81 -3.6 -4.82901 | overlap 2105650 GCCCGCGCCACCTTC GGCCGGGCGGGCCT GCACAA AGGCCAGCACTTCC TTTTTCTGCACCAGC Daci_1904 2106995 - 2106315 - | DNA repair protein RadC TERM 1642 2106800 - 2106848 + g 80 -16.6 -3.14344 | gap 1 TCAGGTCGGCGTGCC CGGCCTGCAGCAGCCCGGACAGG CCGG CCCGGCCGGGCAGCTGCA-GCAG TTCCTGGGCCAGCTG Daci_1905 2107093 - 2107563 + | peptidylprolyl isomerase FKBP-type Daci_1906 2107565 - 2108563 + | hydroxymethylbutenyl pyrophosphate reductase TERM 1643 2108621 - 2108594 - T 100 -16.4 -4.59109 | gap 1, opp_overlap 2108599 GACATTGGCCAAAAA GC-AAACGGGCGC CTG GCGCCCGTTTTGC ATGGTGAGGTCGAAA TERM 1644 2108599 - 2108615 + T 100 -15.1 -4.21194 | opp_overlap 2108594 TGGCCAAAAAGCAAA CGGGCGC CTG GCGCCCG TTTTGCATGGTGAGG Daci_1907 2109338 - 2108640 - | CBS domain-containing protein TERM 1645 2108756 - 2108706 - G 77 -14.5 -3.14132 | GGTGCGGCTGATGAA GCCGGCCAGCAGGCCCTGCTCAT CGGTC ACGGGCAGGCCCGGCAGGCCGGT CTCCAGCAGCACGCC TERM 1646 2109051 - 2109089 + g 71 -2.1 -4.65895 | overlap 2109042 GTGGCTCATCACGTC GGCCACGGTCTGCAGGG GCTGG CGTGGCTGGCTGGGGCC TTTTTCCGTGGAAAG Daci_1908 2109476 - 2110792 + | seryl-tRNA synthetase TERM 1647 2110924 - 2110961 + T 85 -5.7 -5.08169 | gap 1, opp_overlap 2110924 2110926, overlap 2110926 TCCGCCAAGATGCAA GACGCTTGAGTGCTAT CAAAACA ATAGT-CTCAAGCGGC TTTTTTGCGCTCTGT Daci_1909 2111954 - 2110953 - | integrase family protein TERM 1648 2111385 - 2111397 + g 75 -9.1 -4.208 | TATGCGGATTACGCG CCGCA CCT TGCGG TTTCTGATTTTGCGC TERM 1649 2111570 - 2111581 + g 75 -5.8 -4.44046 | overlap 2111560 TGCGCGCCCGGATCG TGGC CGGT GCCA TTTCTTTGCCGTACC TERM 1650 2112141 - 2112125 - R 100 -10.8 -5.24129 | opp_overlap 2112126 GTCCTCCATAAAAAA GCCCCG ACTAG CGGGGC TGGGGTTGTTGGGGC Daci_1910 2112987 - 2112745 - | hypothetical protein Daci_1911 2114245 - 2113205 - | hypothetical protein TERM 1651 2114380 - 2114357 - R 71 -8 -4.07859 | overlap 2114352 2114358 TGAAGAAACAGGAAA GCCCTCGCGG CATA CCGGGAGGGG AGGTATCAGGACAGC Daci_1912 2114814 - 2114425 - | hypothetical protein Daci_1913 2115134 - 2114847 - | histone family protein nucleoid-structuring protein H-NS Daci_1914 2115757 - 2115365 - | hypothetical protein Daci_1915 2116403 - 2115774 - | exonuclease, phage-type Daci_1916 2117307 - 2116384 - | RecT protein Daci_1917 2117673 - 2117413 - | hypothetical protein Daci_1918 2118244 - 2118059 - | hypothetical protein Daci_1919 2118618 - 2118241 - | hypothetical protein Daci_1920 2118919 - 2118620 - | hypothetical protein Daci_1921 2119143 - 2118907 - | hypothetical protein Daci_1922 2119633 - 2119337 - | hypothetical protein Daci_1923 2119878 - 2119630 - | hypothetical protein TERM 1652 2119931 - 2119913 - R 100 -12.4 -5.15634 | opp_overlap 2119913 CAGGCCATGAAAAAA GGCCCTGC ATT GCAGAGCC TGTGTAAAGAGCCGC Daci_1924 2120634 - 2120323 - | hypothetical protein Daci_1925 2120925 - 2120680 - | hypothetical protein TERM 1653 2120945 - 2120978 + r 72 -11.8 -3.32343 | opp_overlap 2120945, overlap 2120950 TCTCCTGTTGAAAAA CCAAAGGCGCCG CAACGGGTCA TGGCGCCTTTGG TTCTGCCCCTGTGCG TERM 1654 2120978 - 2120945 - R 100 -13.9 -4.56597 | opp_overlap 2120945 2120950 TCTCCTGTTGAAAAA CCAAAGGCGCCGCAA CGGG TCATGGCGCCTTTGG TTCTGCCCCTGTGCG Daci_1926 2121349 - 2121008 - | hypothetical protein TERM 1655 2121376 - 2121402 + r 84 -11.6 -4.09243 | opp_overlap 2121376, overlap 2121380 TGGTGGTTGAAAAAA CGAAGCGCACTC GGC GAATGCGCTTTG TTTTGCCCAGATGTC TERM 1656 2121402 - 2121376 - R 100 -11.6 -5.00616 | opp_overlap 2121376 2121380 TGGTGGTTGAAAAAA CGAAGCGCACTC GGC GAATGCGCTTTG TTTTGCCCAGATGTC TERM 1657 2121380 - 2121398 + r 85 -8.8 -4.64861 | opp_overlap 2121376, overlap 2121376 GGTTGAAAAAACGAA GCGCACTC GGC GAATGCGC TTTGTTTTGCCCAGA TERM 1658 2122035 - 2122046 + r 71 -7.2 -4.25056 | GACACCCTCCGCAGC CGCC CTGG GGCG TTTGTTGCTGCGATG TERM 1659 2122173 - 2122157 - R 100 -10.8 -5.15381 | AACAGACGCAAAAAA GCCCGC ATGGG GCGGGC TAGGAGGTTGTGATG Daci_1927 2122542 - 2122345 - | hypothetical protein Daci_1928 2123209 - 2122766 - | hypothetical protein Daci_1929 2124114 - 2123467 - | peptidase S24/S26 domain-containing protein Daci_1930 2124428 - 2124655 + | hypothetical protein Daci_1931 2124900 - 2125676 + | hypothetical protein Daci_1932 2125673 - 2126047 + | hypothetical protein Daci_1933 2126025 - 2126996 + | hypothetical protein TERM 1660 2127609 - 2127573 - g 73 -7.1 -4.1899 | overlap 2127574 GGAGCGCATGGAAAA GGCGCTGGCCAGCGAGA CCT TCACGCTGCCCAACGGA CTCTCCGAGAGCGAG Daci_1934 2127169 - 2127666 + | hypothetical protein Daci_1935 2127663 - 2127911 + | hypothetical protein Daci_1936 2127908 - 2128105 + | hypothetical protein Daci_1937 2128098 - 2128436 + | hypothetical protein Daci_1938 2128433 - 2128765 + | hypothetical protein Daci_1939 2128762 - 2129337 + | lambda NinG family protein Daci_1940 2129351 - 2129737 + | ECF subfamily RNA polymerase sigma-24 factor TERM 1661 2129981 - 2129956 - f 73 -8.9 -3.95424 | opp_overlap 2129956 AGGATCAACACCAAA GCCTCGATTGC TCAC GCAGTCGGGGC TTTTTCATTTCCGCA TERM 1662 2129956 - 2129981 + F 100 -13.3 -4.98531 | opp_overlap 2129956 AGGATCAACACCAAA GCCTCGATTGC TCAC GCAGTCGGGGC TTTTTCATTTCCGCA Daci_1941 2130548 - 2131021 + | putative terminase small subunit protein Daci_1942 2131018 - 2132319 + | PBSX family phage terminase large subunit Daci_1943 2132349 - 2134640 + | hypothetical protein Daci_1944 2134624 - 2134938 + | hypothetical protein TERM 1663 2134967 - 2134947 - f 88 -6.7 -4.88407 | CGAGTGAAGGAAAAA GCCGCGAAC AGT GGCCGCAGC TTCAACACCGTGTCC Daci_1945 2135126 - 2136061 + | hypothetical protein Daci_1946 2136096 - 2137016 + | putative phage major head protein Daci_1947 2137056 - 2137487 + | hypothetical protein TERM 1664 2137493 - 2137506 + F 82 -9.5 -4.40526 | opp_overlap 2137493 GTCCAACTGATCACA GGGGC TCCG GCCCC TTTCCTTTTTCTCTC Daci_1948 2137548 - 2137862 + | hypothetical protein Daci_1949 2137862 - 2138173 + | hypothetical protein Daci_1950 2138170 - 2138787 + | constituent protein Daci_1951 2138789 - 2139853 + | hypothetical protein TERM 1665 2140274 - 2140286 + F 70 -3.4 -4.65895 | overlap 2140271 2140269 CCCCTGCTGCAACAG TCAC CGGCT GTGA TTTTTGGGTGCCAGG Daci_1952 2140716 - 2141087 + | hypothetical protein TERM 1666 2141107 - 2141120 + F 100 -9.5 -4.77173 | opp_overlap 2141107 AAACCATCACACCAA CCCGC TTCG GCGGG TTTCTTTTATGCCCA TERM 1667 2141817 - 2141800 - g 81 -2 -5.0065 | gap 1, overlap 2141802 CATCTACAAAGAAAA CAGCATG TATGC CATGC-G AGCCACAGGCGGCCT Daci_1953 2141129 - 2142673 + | hypothetical protein TERM 1668 2142753 - 2142773 + G 83 -8.2 -4.64844 | GCTGAACATCCAGAC GGCGTGGC AAGCA GCTGCGCC TTTTGTCTATCTGCA Daci_1954 2142673 - 2142918 + | hypothetical protein TERM 1669 2142895 - 2142907 + F 80 -10.5 -4.14243 | opp_overlap 2142895 2142894 TACGGATACAGAAAC GGCGC CTG GCGCC TTTTGGGATGAGGTG Daci_1955 2142927 - 2143937 + | hypothetical protein Daci_1956 2144018 - 2144293 + | hypothetical protein TERM 1670 2144487 - 2144465 - g 72 -6.3 -4.32034 | overlap 2144466 GTACTACCAGCAAAA CCCGCTGAA CCAAC TTCAGCAGA CCAGCTATCAGAACC TERM 1671 2144680 - 2144657 - g 72 -14.6 -2.87132 | gap 1 GGGCGCTGGCACATA CCGCACTGGCG CGA CGCCAG-GCGG CAGTGTGGCTGGCGG Daci_1957 2144295 - 2145095 + | hypothetical protein Daci_1958 2145095 - 2146600 + | hypothetical protein Daci_1959 2146600 - 2148747 + | hypothetical protein TERM 1672 2148861 - 2148877 + F 100 -10.8 -5.06414 | TTTCCATAGTCCTAT GCCCGC CTTGA GCGGGC TTTTTGTTGCAAAAG Daci_1960 2148894 - 2149316 + | hypothetical protein Daci_1961 2149385 - 2149702 + | hypothetical protein Daci_1962 2150275 - 2149703 - | HNH endonuclease TERM 1673 2149887 - 2149905 + g 89 -6 -5.12068 | TTGCATACTTCCCCA TGCTGC ATATTTA GCAGCA TTTTTCTTGCATGTC Daci_1963 2150287 - 2150793 + | hypothetical protein Daci_1964 2150790 - 2151233 + | hypothetical protein TERM 1674 2151419 - 2151448 + F 81 -13.7 -3.31461 | opp_overlap 2151426, overlap 2151426 CCGCCAATGTGTCAG CAAACAAGCGCCT TCCG AGGCGCTTTTTTG TTGTGCCCATCAATC TERM 1675 2151441 - 2151426 - f 80 -10.4 -4.00042 | opp_overlap 2151419 2151426 TGTGTCAGCAAACAA GCGCCT TCCG AGGCGC TTTTTTGTTGTGCCC TERM 1676 2151426 - 2151441 + F 100 -10.4 -5.55769 | opp_overlap 2151426, overlap 2151419 TGTGTCAGCAAACAA GCGCCT TCCG AGGCGC TTTTTTGTTGTGCCC Daci_1965 2151542 - 2152009 + | hypothetical protein TERM 1677 2152117 - 2152080 - f 100 -19.9 -4.63107 | opp_overlap 2152080 ATCAAAGAATCAAAA CGCCCCGAAAACCCGCA TGGA TGCTGGGTTTCGGGGCG TTTCTGTTTGATTAA TERM 1678 2152080 - 2152117 + F 100 -19.9 -4.40184 | opp_overlap 2152080 ATCAAAGAATCAAAA CGCCCCGAAAACCCGCA TGGA TGCTGGGTTTCGGGGCG TTTCTGTTTGATTAA Daci_1966 2152251 - 2152685 + | hypothetical protein TERM 1679 2153124 - 2153099 - T 100 -12.6 -4.56133 | gap 1, opp_overlap 2153099 CCCGAACAAGCAAAA GCCCCGC-TGG GCGAG CCATGCGGGGC TTTGTTGCGTCTGGG TERM 1680 2153099 - 2153124 + T 95 -12.6 -4.23213 | gap 1, opp_overlap 2153099 CCCGAACAAGCAAAA GCCCCGC-TGG GCGAG CCATGCGGGGC TTTGTTGCGTCTGGG Daci_1967 2153278 - 2153150 - | hypothetical protein TERM 1681 2153331 - 2153314 - R 100 -14.1 -5.24129 | TGCGGCCATAAAAAA GGCCCGC GTTG GCGGGCC GTGCTCAGATCTCCA Daci_1968 2153617 - 2153336 - | histone family protein nucleoid-structuring protein H-NS TERM 1682 2153522 - 2153536 + g 72 -4.2 -4.62471 | GAGTTCGCGGACCTT GGCG ATGACTC CGCC TTTTTCCGCCTTCAG Daci_1969 2154111 - 2153752 - | hypothetical protein TERM 1683 2154190 - 2154200 + r 100 -8.2 -5.31059 | overlap 2154176 GGCGTTTGGCGACAG CGCC GGT GGCG TTTTTTCCTTCGTGT Daci_1970 2154613 - 2154263 - | hypothetical protein TERM 1684 2154716 - 2154699 - R 93 -8.3 -4.93877 | opp_overlap 2154700, overlap 2154700 CCGCACCAAAGAAAA CGCCCCG CGAA CGGGGCT GTGTCAGAGACCGCA TERM 1685 2154715 - 2154700 - R 74 -11.8 -3.55603 | opp_overlap 2154700, overlap 2154699 CGCACCAAAGAAAAC GCCCCG CGAA CGGGGC TGTGTCAGAGACCGC Daci_1971 2155099 - 2154743 - | PRC-barrel domain-containing protein Daci_1972 2155503 - 2155880 + | hypothetical protein TERM 1686 2156245 - 2156297 + G 80 -17.5 -2.93435 | overlap 2156293 GTGGCCGGCGTGTAT GGCGCCGCCACGGCCAGCCGCAAGA TCC TCTGGGTGCAGGCCGTGCCGGCGGC TGTGTCGCTGATTGC Daci_1973 2155981 - 2156331 + | hypothetical protein Daci_1974 2156991 - 2156365 - | hypothetical protein Daci_1975 2157812 - 2157006 - | hypothetical protein Daci_1976 2158264 - 2157809 - | hypothetical protein Daci_1977 2158911 - 2158291 - | hypothetical protein Daci_1978 2159522 - 2158911 - | hypothetical protein Daci_1979 2161947 - 2159596 - | hypothetical protein TERM 1687 2160437 - 2160418 - G 71 -2.8 -4.62069 | gap 1, overlap 2160433 CGGCCAGTCGAAAAA GCG-GGTCT GGT AGAACGCGC TGCCATAAAGGCTGC TERM 1688 2161089 - 2161129 + g 81 -4 -4.82901 | gap 2, opp_overlap 2161081 CAAACCAGGGGCCAT CCAGCCGCACGGTGGCGC CCAGCCA GC-CCAGCGTGCC-CTGG TTTTTCTCGAACCCG TERM 1689 2162237 - 2162268 + r 71 -5.8 -4.32046 | gap 1, overlap 2162239 2162263 GGCGCTGCGGTGCCT GGCTGGCAG-TGCCC AGA GGGCAGTTGGCAGGC TTTGCTTTTTGGCCA TERM 1690 2162263 - 2162273 + r 70 -3.2 -4.60041 | overlap 2162239 2162237 CCCAGAGGGCAGTTG GCAG GCT TTGC TTTTTGGCCATGGAT TERM 1691 2162625 - 2162594 - R 72 -13.6 -2.55074 | opp_overlap 2162593 2162591, overlap 2162584 GGCAAGGCCAACGCA GACCCCGGGCACCC TGGA GGGCGCTCGTGGTC ATGGTGTTGGCTGCC Daci_1980 2164599 - 2162938 - | 4-hydroxythreonine-4-phosphate dehydrogenase TERM 1692 2164538 - 2164526 - G 87 -4.7 -5.1861 | opp_overlap 2164525 CCGATGACGAAAAAA GGCGC ATG GGGCC GGGCAGGGTCCATGG TERM 1693 2165076 - 2165125 + G 72 -8.3 -3.9712 | gap 1, overlap 2165053 2165115 CGCTGGGCCGAGCGC GGCAGGC-CGCCGGGCCGGACCGG CCG CTGGTGCTGTCCTGCGAGCCCACC TTTCTGATGCGCTGG Daci_1981 2164772 - 2165710 + | LysR family transcriptional regulator Daci_1982 2166639 - 2165728 - | LysR family transcriptional regulator TERM 1694 2166600 - 2166590 - G 71 -2.4 -4.56597 | overlap 2166592 GCCGCGTCCGAAAAA GTGC CGT GCTC GACGATGGCCAGCAA Daci_1983 2166782 - 2166988 + | hypothetical protein TERM 1695 2167121 - 2167133 + G 76 -2.6 -4.72272 | overlap 2167109 2167108 CTCGCGCCAGTTCGG CGCC TTCCT GGTG TTTTTCCTCGCCGCC Daci_1984 2167002 - 2168384 + | Na+/solute symporter Daci_1985 2168398 - 2170062 + | amidohydrolase 3 TERM 1696 2170952 - 2170988 + G 85 -11.5 -4.2772 | AGGCCGGCTGCGCGT GGCGGATCTGGGCGC GGAGCAG GTGGCCGGGTCCGCC TTTGTCTTCATTGGC Daci_1986 2170059 - 2171069 + | cobalamin synthesis protein P47K TERM 1697 2171263 - 2171229 - T 83 -15.9 -2.98823 | opp_overlap 2171234, overlap 2171234 CCCCTGCCAGATAGA CAAAAGCCCTGACAG TTCTG CTGTCAGGGCTTTTT TGTTTTCAGGCCGTG TERM 1698 2171234 - 2171258 + T 100 -16.5 -5.79595 | opp_overlap 2171229 2171234 GCCAGATAGACAAAA GCCCTGACAGT TCT GCTGTCAGGGC TTTTTTGTTTTCAGG TERM 1699 2171258 - 2171234 - T 100 -15.8 -4.64844 | opp_overlap 2171234, overlap 2171229 GCCAGATAGACAAAA GCCCTGACAG TTCTG CTGTCAGGGC TTTTTTGTTTTCAGG Daci_1987 2172255 - 2171269 - | NAD-dependent epimerase/dehydratase Daci_1988 2172342 - 2173250 + | LysR family transcriptional regulator Daci_1989 2173479 - 2173270 - | hypothetical protein TERM 1700 2173694 - 2173674 - R 93 -15.4 -3.65986 | overlap 2173668 CATGAGAAATGAGAA GGGCCCGC GCATG GCGGGCCC TGGAAAACTGCCGTA Daci_1990 2174768 - 2173722 - | hypothetical protein TERM 1701 2173812 - 2173798 - G 75 -8.5 -4.15833 | opp_overlap 2173807 ACCAGCAGTGCAAAA GGCCG CCAGC CGGCC TGGGCCAGTTGCTGG Daci_1991 2175739 - 2174765 - | phosphate butyryltransferase TERM 1702 2175881 - 2175838 - R 85 -12.3 -3.73775 | gap 1, opp_overlap 2175877, overlap 2175839 2175870 CCCAGGCGCATGAAA CCGGCGCGGCCCATCC-CAG AGACA CCGAGGAAGGGCCGCCCCGC ACCGAGGGTGTCGTC TERM 1703 2175880 - 2175839 - R 81 -15.8 -2.84051 | gap 1, opp_overlap 2175877, overlap 2175838 2175870 CCAGGCGCATGAAAC CGGCGCGGCCCATCC-CAG AGACA CCGAGGAAGGGCCGCCCCG CACCGAGGGTGTCGT Daci_1992 2177774 - 2175963 - | sulfoacetaldehyde acetyltransferase TERM 1704 2178308 - 2178319 + G 79 -7.2 -4.52589 | overlap 2178307 CGGGTGGAGACGCCC GCGC CGCT GCGC TTTTATCTGCACCCG Daci_1993 2177906 - 2178733 + | IclR family transcriptional regulator TERM 1705 2178878 - 2178896 + G 73 -12.4 -3.53012 | CAACCCGCAGGCCAC GCTGGCCA TCC TGGCCGGC TTTGCGCACAACCGG TERM 1706 2179248 - 2179226 - g 72 -6.2 -4.25104 | CCTGCTGGACCAAAA GCGCGTGC TCCAGCC GCATGCGC AGTTCCGCCTCTTCG Daci_1994 2178726 - 2179703 + | cobaltochelatase Daci_1995 2179693 - 2181384 + | cobaltochelatase Daci_1996 2182243 - 2181479 - | alpha/beta hydrolase fold Daci_1997 2182347 - 2182715 + | hypothetical protein TERM 1707 2182861 - 2182883 + G 86 -6.8 -5.06816 | overlap 2182862 2182863 CGTTCCGATTGCCAT GTGGCGCCGC AGC GCGCCGCCGA TTTTTCTTCGACCCT TERM 1708 2183083 - 2183109 + G 75 -4.5 -4.66833 | overlap 2183087 GAGCGCACGCTGGCC GACT-TCAAGGGC CAG GCCC-TGATGGTC TTTTTCGGCTTCACC Daci_1998 2182840 - 2183505 + | electron transport protein SCO1/SenC Daci_1999 2183734 - 2185572 + | diguanylate cyclase Daci_2000 2186403 - 2185636 - | hypothetical protein Daci_2001 2186953 - 2186426 - | protein tyrosine phosphatase TERM 1709 2187430 - 2187451 + H 100 -5.2 -5.7946 | gap 1 CAAGGCATCAACGCG TGCCAGTCA TTAAT TGAC-GGCA TTTTTTTATTGAGCA Daci_2002 2187593 - 2188276 + | hypothetical protein Daci_2003 2188659 - 2188318 - | nitrite reductase (NAD(P)H), small subunit TERM 1710 2188560 - 2188534 - G 70 -13.1 -3.30124 | gap 1, overlap 2188555 GTCTATGGCGTAGAA GCGGTC-TTCGC CAAG GCGAAAGACCGC CACATGCCGGCCTTC Daci_2004 2191224 - 2188708 - | nitrite reductase (NAD(P)H), large subunit Daci_2005 2192483 - 2191476 - | AraC family transcriptional regulator TERM 1711 2192714 - 2192727 + G 81 -9.5 -4.37886 | overlap 2192668 GCTGGCCGACGCGGT GCGCG ACGA CGCGC TTTTCTCGGAGATCC Daci_2006 2192646 - 2193494 + | taurine dioxygenase Daci_2007 2193524 - 2194582 + | hypothetical protein TERM 1712 2195376 - 2195337 - g 72 -13.4 -3.16564 | GGTGGATTTCAGCAA CTGGAGCGGCGTGTTCGC CTCG GCGCAGACGCCGCGCCCG CTGCTGGAGAAGATC Daci_2008 2194597 - 2195565 + | hypothetical protein Daci_2009 2195605 - 2196576 + | alcohol dehydrogenase TERM 1713 2196631 - 2196655 + G 74 -14.3 -3.30124 | GGTACCGTGGCCGCA GGCCGCAGG CCCGTCA CCTGCGGCC TTATCCGCAGTGCCA TERM 1714 2197573 - 2197587 + G 75 -8.5 -4.12902 | overlap 2197583 GGCCTGCTGGGGTTT GCCGC GCCCA GCGGC TTTTGCCACTGGTTC Daci_2010 2196589 - 2197671 + | AraC family transcriptional regulator Daci_2011 2198734 - 2197676 - | hypothetical protein Daci_2012 2199638 - 2198793 - | taurine dioxygenase Daci_2013 2200627 - 2199659 - | hypothetical protein Daci_2014 2200730 - 2202094 + | porin TERM 1715 2202286 - 2202301 + G 81 -2.5 -5.00616 | overlap 2202271 2202272 GCTGGCCGTGGCCGC GCTCA GTTCGG TGGGC TTTTTTGCCGACCGG TERM 1716 2202355 - 2202400 + G 76 -13.9 -3.53012 | gap 1, opp_overlap 2202385 2202386 TGCGCGCCAGCTGCT GGGCGGCGACGTGGTCGTGGTC GGC GACAACC-CCACGGCGCCGGCC TTTGCCGAGCGCGCA Daci_2015 2202179 - 2204713 + | hypothetical protein TERM 1717 2204719 - 2204733 + T 71 -7 -4.14633 | overlap 2204722 GGCTGAGTAGTTTGG GGCCAG GTC CGGGCC TGTTTTTTGACCCTG TERM 1718 2204722 - 2204735 + T 83 -4.5 -5.03314 | overlap 2204719 TGAGTAGTTTGGGGC CAGGT CCGG GCCTG TTTTTTGACCCTGCC TERM 1719 2204990 - 2204965 - T 78 -14.1 -3.25491 | gap 1, overlap 2204969 AAGTCAGATGACGAA GCAAGCCTGTCC TTC GG-CAGGCTTGC CACCCCGCATCCCGC TERM 1720 2205173 - 2205116 - T 100 -25 -3.1577 | gap 1, overlap 2205107 2205102 2205114 2205146 AGCCAACAGCCAACA GCCGGCGCCATCGCTCCGCTCGGCG TGAAACCGG CGCCGAGCGAAGCGACGGC-CCGTC AAAACTCCCCGTGTG Daci_2016 2206421 - 2205528 - | LysR family transcriptional regulator TERM 1721 2206251 - 2206302 + g 85 -16.6 -3.61398 | gap 1 GAGGCGTACCTGGCG CGTGGTGC-GCTGGAACAGGCGCAG GCC CAGTTGCTGTTCCAGCCGCGCCACG TTCTTGCCAACGGCC TERM 1722 2206782 - 2206813 + G 76 -7.9 -4.30576 | gap 1, overlap 2206781 GCTGATGGCGGCCGG CGCGCTGGCCGATC TGCAC GGGCGGC-GGCGCG TTTTCCTGATGGGGC TERM 1723 2206920 - 2206969 + G 85 -19.2 -3.01712 | gap 1 GCGTGCGCTGCAGGG CCTGGGCGCG-GCCGCCGCGCTG GCGGG CGGCACGGCGGCGCTGGCCCAGG TGTTCGACGGGACGG Daci_2017 2206615 - 2208165 + | major facilitator transporter Daci_2018 2208205 - 2208606 + | globin TERM 1724 2208666 - 2208639 - T 100 -22 -5.40072 | CGCTGCTGAAAAAAA GGGCCGGCCCCC TGCA GGAGGCCGGCCC AAGCAGCAATCGGTT Daci_2019 2210108 - 2208687 - | FAD dependent oxidoreductase TERM 1725 2209164 - 2209152 - G 78 -9.1 -4.25104 | GCGGCGGTAGTAAAA GCGCA GCG TGCGC GTGTCGGTGATGACC TERM 1726 2209363 - 2209317 - G 73 -12.1 -3.53012 | gap 1, overlap 2209318 2209322 GCCGCCCGTGGCAAA GCCAACGGCGCGCGCCCGCACG GTGC CGC-CGGGCGTGCGCAGATGGT GCACGCCGTTGCGCG TERM 1727 2209362 - 2209318 - G 70 -15.6 -2.71712 | gap 1, overlap 2209317 2209322 CCGCCCGTGGCAAAG CCAACGGCGCGCGCCCGCACG GTGC CGC-CGGGCGTGCGCAGATGG TGCACGCCGTTGCGC TERM 1728 2209358 - 2209322 - G 74 -13.6 -3.27525 | gap 1, overlap 2209318 2209317 CCGTGGCAAAGCCAA CGGCGCGCGCCCGCACG GTGC CGC-CGGGCGTGCGCAG ATGGTGCACGCCGTT TERM 1729 2210126 - 2210147 + H 91 -7.9 -4.82154 | CGGATGTCTCCTGGT GCGGCGGCT TGGG ATCTGCCGC TTTTTGCTATGGATT Daci_2020 2210444 - 2210842 + | hypothetical protein TERM 1730 2211602 - 2211626 + G 90 -12.7 -4.4078 | overlap 2211604 CATCGTGCCGGTGCT GACCGGGGCCG TGG CGGCCACGGGC TTTTACTTCGGCGCC Daci_2021 2210967 - 2212409 + | amino acid permease-associated region TERM 1731 2212414 - 2212451 + T 78 -13.3 -3.25356 | gap 1, opp_overlap 2212406, overlap 2212410 AGAAGTACTGACCCA GGGGCGAC-GGGGCCGGC AGT GCCGGTCCCGGCCACTCC TTGCGTTACTTCTCG Daci_2022 2213986 - 2212457 - | transcriptional regulator TERM 1732 2212486 - 2212517 + g 86 -21.7 -2.72049 | overlap 2212488 GCTCCTCACGGATCG CATCGGCCAGGGC CTTCAC GCCCTGGCCGATG TCGTTGGCGGGTATG TERM 1733 2212488 - 2212515 + g 82 -18.5 -2.90392 | overlap 2212486 TCCTCACGGATCGCA TCGGCCAGGGC CTTCAC GCCCTGGCCGA TGTCGTTGGCGGGTA TERM 1734 2214112 - 2214126 + H 70 -5 -4.56597 | CACGGGGCCGGGAGT TTGCGA TGG TTGCAA TTTTTGCGGAGAGGC TERM 1735 2214288 - 2214250 - H 100 -14.1 -4.26076 | gap 1, opp_overlap 2214256, overlap 2214256 CCAGCCGCACCAAAA CG-ACAAGCCTCAGAACT GCAA AGTTCTGAGGCTTTTTCG TTTCAGGCGCCCGCA TERM 1736 2214281 - 2214256 - H 93 -16.3 -3.70546 | opp_overlap 2214256, overlap 2214250 GCACCAAAACGACAA GCCTCAGAACT GCAA AGTTCTGAGGC TTTTTCGTTTCAGGC TERM 1737 2214256 - 2214281 + H 100 -16.3 -4.98531 | opp_overlap 2214256 2214250 GCACCAAAACGACAA GCCTCAGAACT GCAA AGTTCTGAGGC TTTTTCGTTTCAGGC TERM 1738 2214534 - 2214496 - H 100 -14.1 -4.26076 | gap 1, opp_overlap 2214502, overlap 2214502 CCAGCCGCACCAAAA CG-ACAAGCCTCAGAACT GCAA AGTTCTGAGGCTTTTTCG TTTGTGCTCGGTTGG TERM 1739 2214527 - 2214502 - H 93 -16.3 -3.70546 | opp_overlap 2214502, overlap 2214496 GCACCAAAACGACAA GCCTCAGAACT GCAA AGTTCTGAGGC TTTTTCGTTTGTGCT TERM 1740 2214502 - 2214527 + H 100 -16.3 -5.05505 | opp_overlap 2214496 2214502 GCACCAAAACGACAA GCCTCAGAACT GCAA AGTTCTGAGGC TTTTTCGTTTGTGCT Daci_2023 2214610 - 2215176 + | transcription elongation factor GreB Daci_2024 2216554 - 2215181 - | lytic murein transglycosylase Daci_2025 2216641 - 2217507 + | silent information regulator protein Sir2 TERM 1741 2217529 - 2217512 - T 100 -14.1 -4.8622 | opp_overlap 2217510 TGGCGCAATGAAAAA GCCCCGC AGGA GCGGGGC AGTGTTCAGGGGATG Daci_2026 2219802 - 2217535 - | (p)ppGpp synthetase I, SpoT/RelA TERM 1742 2218697 - 2218730 + g 78 -12.3 -3.76224 | GCCTTGTACAGCCAG TGCGCGGCGACGCCG GCTT CGGCGACGATGTGCA TTTCCTCGGTGCGGA TERM 1743 2219851 - 2219871 + r 82 -11.1 -3.86822 | opp_overlap 2219853, overlap 2219853 GGCTTCATGTAAAAA AAGCACCGC TGT GCGGTGCTC TTTGTGGGGCCATTG TERM 1744 2219853 - 2219869 + r 86 -13.7 -3.52113 | opp_overlap 2219853, overlap 2219851 CTTCATGTAAAAAAA GCACCGC TGT GCGGTGC TCTTTGTGGGGCCAT TERM 1745 2219869 - 2219853 - R 100 -13.7 -5.47218 | opp_overlap 2219853 2219851 CTTCATGTAAAAAAA GCACCGC TGT GCGGTGC TCTTTGTGGGGCCAT Daci_2027 2220107 - 2219904 - | DNA-directed RNA polymerase subunit omega Daci_2028 2220788 - 2220126 - | guanylate kinase Daci_2029 2221708 - 2220800 - | hypothetical protein Daci_2030 2221783 - 2222814 + | serine/threonine protein kinase Daci_2031 2222811 - 2223716 + | protein serine/threonine phosphatase TERM 1746 2223800 - 2223785 - f 82 -11.8 -3.97947 | CCTATTGACGACAAA GGGCGC ACGG GCGCCC GACTGGATTTCTACG Daci_2032 2223816 - 2224418 + | RdgB/HAM1 family non-canonical purine NTP pyrophosphatase Daci_2033 2224415 - 2225659 + | oxygen-independent coproporphyrinogen III oxidase TERM 1747 2225684 - 2225699 + T 100 -10.4 -5.52384 | opp_overlap 2225684 CCGCCGTTGAAAAAA GGACGC CGAG GCGTCC TTTTTTTCATCCAGC TERM 1748 2225699 - 2225684 - T 100 -10.4 -5.00616 | opp_overlap 2225684 CCGCCGTTGAAAAAA GGACGC CGAG GCGTCC TTTTTTTCATCCAGC Daci_2034 2226088 - 2225738 - | hypothetical protein Daci_2035 2227841 - 2226240 - | sporulation domain-containing protein TERM 1749 2226499 - 2226540 + g 74 -12.9 -3.54459 | gap 1 ATGTAGTAGTTGCCC GGCTCCAGAGCC-GCCGAGG CGG CCTTGGCAGGTGCCGGGGCC TTTGCGACGGGTTCG TERM 1750 2227779 - 2227752 - G 76 -13.4 -3.53012 | gap 1, opp_overlap 2227752 GCCGGGCTCGGCAAA GGCGGGCTCCTGC CGG GCAGGGGCC-GCC TGCCTTCCGAAGTCG TERM 1751 2227942 - 2227984 + r 77 -12 -3.60098 | opp_overlap 2227940 2227939 2227952, overlap 2227943 CGCGCAGATCAATCG CGCAGATCAATCGGGCCC CTCCATC GGCCCCGATCGATCTGCC TTTGCCATCAGGCCT TERM 1752 2227943 - 2227983 + r 79 -15.5 -2.75844 | opp_overlap 2227940 2227939 2227952, overlap 2227942 GCGCAGATCAATCGC GCAGATCAATCGGGCCC CTCCATC GGCCCCGATCGATCTGC CTTTGCCATCAGGCC Daci_2036 2229308 - 2227992 - | fumarylacetoacetase Daci_2037 2230201 - 2229383 - | short-chain dehydrogenase/reductase SDR Daci_2038 2230941 - 2230198 - | GntR family transcriptional regulator TERM 1753 2231014 - 2230986 - H 76 -8.7 -4.04206 | opp_overlap 2231004 TTATTTTCACACAAA GCGCCAGCCCTGA CAG CCTGTGCTGACGC CCATCGTTGACAAAT Daci_2039 2231131 - 2233362 + | hypothetical protein Daci_2040 2233435 - 2234550 + | phospho-2-dehydro-3-deoxyheptonate aldolase TERM 1754 2234750 - 2234760 + F 76 -5.4 -4.62783 | overlap 2234754 TCAGATCAGTCCGAT TGCA TCA TGCA TTTTTGCAATGAATG TERM 1755 2235264 - 2235276 + G 91 -2.6 -5.40279 | overlap 2235256 GTTTTGGCTGGTATT CCTG TATGC CGGG TTTTGTTTTATTTTG TERM 1756 2235896 - 2235922 + G 90 -4.5 -5.27923 | opp_overlap 2235907 CAGTGCAATTTCAGT TCATCAAAGAT TCATC GTCATTGATGA TTTTTTGTGCAATTA Daci_2041 2235004 - 2236305 + | multi anti extrusion protein MatE Daci_2042 2236867 - 2236412 - | aromatic catabolism protein-like protein Daci_2043 2237327 - 2236860 - | MerR family transcriptional regulator Daci_2044 2238192 - 2237410 - | short-chain dehydrogenase/reductase SDR TERM 1757 2237567 - 2237583 + g 82 -3.6 -5.00616 | opp_overlap 2237568, overlap 2237568 AGCCCCAGGCGAACC ACGTCC TCGCT GGACGC TTTTTTCCCGAAGGA Daci_2045 2238259 - 2239194 + | LysR family transcriptional regulator Daci_2046 2240093 - 2239245 - | chaperone protein HchA Daci_2047 2240681 - 2240343 - | transposase, IS4 family protein Daci_2048 2241166 - 2240741 - | putative TIS1421-transposase orfA protein TERM 1758 2242421 - 2242411 - H 78 -6.8 -4.6468 | opp_overlap 2242411 2242417 GCAAATTAGATAAAA GCAG ACG CTGC TTTGCGGCTTAACTC Daci_2049 2243436 - 2243942 + | hypothetical protein Daci_2050 2243968 - 2244282 + | ArsR family transcriptional regulator Daci_2051 2244279 - 2244635 + | hypothetical protein TERM 1759 2244682 - 2244707 + F 100 -12.6 -4.85782 | gap 1, opp_overlap 2244654 CCTGCCCCGGCAACG GGGCATGCGGC GCAGG GCCGCA-GCCC TTTCTTTTTCACCAC Daci_2052 2244742 - 2245347 + | ATP-dependent Clp protease proteolytic subunit TERM 1760 2245437 - 2245462 + T 78 -14.1 -3.25223 | gap 1 GGCGGTTGCGGGGTT GCAGTCCTG-CC GAA GGACAGGACTGC TTCGTCATCTGACTC TERM 1761 2245656 - 2245630 - T 74 -6.5 -4.3255 | gap 1 TGGCGAATCAAGAAA GGGCAGTCGGCC GCCG GGCCGAG-ACCC GGCCTCGAAAAACAA TERM 1762 2245720 - 2245669 - T 79 -7.8 -4.56597 | overlap 2245672 2245692 2245695 CCCGGCCTCGAAAAA CAACCACCCGGCAGGGGCAAGAAG CAGC CCCCTGGCCCACGCCAGAAGGCTA ACCCCGCCCCCTCAT TERM 1763 2245717 - 2245672 - T 82 -9.5 -4.40561 | overlap 2245669 2245692 2245695 GGCCTCGAAAAACAA CCACCCGGCAGGGGCAAGAAG CAGC CCCCTGGCCCACGCCAGAAGG CTAACCCCGCCCCCT TERM 1764 2245718 - 2245695 - T 70 -12.4 -2.93549 | overlap 2245672 2245669 2245692 CAGGGGCAAGAAGCA GCCCCCTGGC CCAC GCCAGAAGGC TAACCCCGCCCCCTC Daci_2053 2246683 - 2245718 - | DNA/RNA non-specific endonuclease TERM 1765 2246593 - 2246617 + g 70 -3.3 -4.44667 | CGGCGAGCATGGAGC GCCACAGTCCG CTG CGGCTGGAGGC TTTCTTCTTGGAGGC Daci_2054 2248035 - 2246824 - | major facilitator transporter TERM 1766 2247999 - 2248041 + g 70 -12.7 -3.33696 | gap 1 AGAAGTTGAGCCCCG GCAGCCA-GCGCCGCGCATG GTGG TGTGTGCGGTGCATGGCGGC TTCCTTCAGCGCAGG Daci_2055 2248394 - 2248047 - | hypothetical protein Daci_2056 2249191 - 2248532 - | putative secreted protein TERM 1767 2248669 - 2248643 - G 74 -12.2 -3.55444 | GCCCGAGGCGGCAAA CAGCTGCCCCTG CTG CAGCGGCTGCTG CAGCGCATGGGGGGC Daci_2057 2250729 - 2249383 - | two component, sigma54 specific, Fis family transcriptional regulator Daci_2058 2252138 - 2250714 - | histidine kinase TERM 1768 2251286 - 2251332 + g 74 -13.6 -3.33737 | gap 1 GTACGGCCTCCAGTG CGCCCTGGCTGCGCGCTTCGC GCAGTG GCGCGG-GCGCTGCCAGCGCG TTCTCGGCCTTCATG TERM 1769 2252223 - 2252198 - H 70 -10.5 -3.53012 | opp_overlap 2252175 GCGGCCGCTGCGAAA GTAACGCCG TGGCGCGT CGGCGTTAC GTGACATCGCCCGTA TERM 1770 2252404 - 2252365 - g 82 -6.2 -4.70266 | opp_overlap 2252341, overlap 2252367 2252388 AACAGGATGCAAAAA GCTTGTCGCAGTGTCTGG AAAA CCGGGCACTGCGCCACCC GCCCCATCGATCGCC Daci_2059 2252301 - 2252996 + | hypothetical protein Daci_2060 2253012 - 2254451 + | diguanylate phosphodiesterase Daci_2061 2255751 - 2254495 - | glycosyl transferase group 1 Daci_2062 2257198 - 2255804 - | sigma-54 dependent trancsriptional regulator TERM 1771 2256200 - 2256188 - G 71 -10.5 -3.75024 | opp_overlap 2256185 2256182 GTCGAGGATGAAGAA GGGCG GCT CGCCC AGCTCCTTCATCGTG Daci_2063 2259537 - 2257249 - | membrane protein-like protein Daci_2064 2260096 - 2259554 - | TadE family protein Daci_2065 2260608 - 2260093 - | TadE family protein Daci_2066 2261082 - 2260642 - | hypothetical protein Daci_2067 2262124 - 2261093 - | TPR repeat-containing protein TERM 1772 2262089 - 2262107 + g 72 -5.9 -4.33274 | overlap 2262079 GGGTGCCGGCGCTGG CGTCCGC CCTGC GCGGGTG TTTTCCTGGTGTCGC Daci_2068 2263131 - 2262127 - | type II secretion system protein TERM 1773 2262244 - 2262256 + g 70 -4.1 -4.41494 | CGTCATCTTGACGGT GATGG AAC CTATC TTTTCCTTGAAGCTG Daci_2069 2264142 - 2263180 - | type II secretion system protein TERM 1774 2263236 - 2263213 - G 82 -9.4 -4.38927 | opp_overlap 2263233, overlap 2263215 CCGGTACAGAAGAAA GGCGCCCAGG GCCT CCAGGGCGGC GGCGACCAGGACCAT Daci_2070 2265461 - 2264139 - | type II secretion system protein E TERM 1775 2265526 - 2265494 - R 84 -9.8 -4.15044 | gap 1, overlap 2265495 GTTCGGTGGAAGAAA CGGTTCAGGCCCCGC GCGG GCGCGGCCTGATC-G CCCGCATGGGCCTGG Daci_2071 2266995 - 2265469 - | Flp pilus assembly protein ATPase CpaE-like protein TERM 1776 2266208 - 2266246 + g 73 -8.1 -4.11216 | gap 2 ATCTCGCGGGGCGTG GCGTCCTTGCCCGGCACGG CCG TCGTGCCATGC-AGG-CGC TTTTGCAGGTACCAG Daci_2072 2268478 - 2267000 - | type II and III secretion system protein TERM 1777 2267246 - 2267210 - G 71 -10.7 -3.61715 | opp_overlap 2267210 GAGGTTCTTGAAGAA GGTGCCCAGGATGGGCA GAT CGCCCAGCACCGGCACC TTGCTGACGTTGGAG Daci_2073 2269595 - 2268504 - | Flp pilus assembly protein CpaB Daci_2074 2270312 - 2269743 - | peptidase A24A prepilin type IV Daci_2075 2270491 - 2270315 - | Flp/Fap pilin component Daci_2076 2270789 - 2270583 - | Flp/Fap pilin component Daci_2077 2272607 - 2270865 - | outer membrane efflux protein Daci_2078 2273983 - 2272607 - | HlyD family type I secretion membrane fusion protein TERM 1778 2273896 - 2273929 + g 78 -16.7 -3.06796 | gap 1 TTGCGCCGGACGCGT CCGCAGGCGGCTG-GC CGT GCACGGCCGCCTGCGC TTCGCTCGACTGGCG Daci_2079 2275851 - 2273980 - | ABC transporter related Daci_2080 2279244 - 2275951 - | Mur ligase middle domain-containing protein Daci_2081 2279806 - 2279282 - | OmpA/MotB domain-containing protein TERM 1779 2279418 - 2279434 + g 72 -3.5 -4.56597 | overlap 2279410 2279410 AGCTGCAGGCTGTTG CGCACCG CGT CGGCACG TTTTTGGCCGAGCGC Daci_2082 2285000 - 2279889 - | hypothetical protein TERM 1780 2286354 - 2286309 - g 76 -8 -4.25104 | overlap 2286313 2286334 2286352 GCTGGCCCAGGAAAA GGCAGCTCAGGCCGCACAGG ACAAGG CCCGCGCGGCCGAGGAAGCC AGGCAGGCAGCGGCC Daci_2083 2285461 - 2286843 + | TPR repeat-containing protein TERM 1781 2287041 - 2287000 - g 72 -9.3 -4.09739 | gap 1, overlap 2287001 CCAAGGCCTCCAAAA CGGCAGCTGCCAAGCCTGCC TCC GGCAAGGCGGGC-GCCGCCA GGCTGCGCGCGGCAT TERM 1782 2287176 - 2287156 - g 70 -9 -3.83026 | gap 1, overlap 2287157 2287160 CCCCCGTACAGCAAA GCCAGGCGG AGGC CCGCCTG-C TGGCCATCATCCGCC Daci_2084 2286843 - 2288342 + | ErfK/YbiS/YcfS/YnhG Daci_2085 2288789 - 2288400 - | hypothetical protein Daci_2086 2289994 - 2288918 - | GntR family transcriptional regulator Daci_2087 2291249 - 2290059 - | hypothetical protein Daci_2088 2292367 - 2291273 - | cobalamin synthesis protein P47K Daci_2089 2293658 - 2292900 - | short-chain dehydrogenase/reductase SDR Daci_2090 2294446 - 2293670 - | short-chain dehydrogenase/reductase SDR Daci_2091 2295899 - 2294454 - | major facilitator transporter Daci_2092 2296803 - 2295928 - | polysaccharide deacetylase Daci_2093 2298238 - 2296805 - | hypothetical protein TERM 1783 2297964 - 2297911 - G 74 -16.6 -2.75481 | gap 2, opp_overlap 2297963 CGGCAAGCGCAACCA CGGCGGCGTCGGCCC-G-GGCTGGCG CGGC CGACTGCAGCAGGGCCGAGGCCGCCG TGGTCGGCGTGCCGC TERM 1784 2298245 - 2298266 + H 85 -2.3 -5.33848 | GGTTTTCATTGAATT TGAATGTTG ATGT CAAAGTTCA TTTTTTGATTCTAGT Daci_2094 2298499 - 2299026 + | hypothetical protein Daci_2095 2300583 - 2299051 - | glycosyltransferase TERM 1785 2300877 - 2300847 - R 76 -12.1 -3.35679 | gap 1, opp_overlap 2300854, overlap 2300854 GCGCGCGATGGACAA GAAA-AAAGCGCCT GGGC AGGCGCTTTGTTTC TGATCATCTGGATCT TERM 1786 2300854 - 2300869 + r 89 -10.4 -4.59944 | opp_overlap 2300847 2300854 ATGGACAAGAAAAAA GCGCCT GGGC AGGCGC TTTGTTTCTGATCAT TERM 1787 2300869 - 2300854 - R 100 -10.4 -5.56673 | opp_overlap 2300854, overlap 2300847 ATGGACAAGAAAAAA GCGCCT GGGC AGGCGC TTTGTTTCTGATCAT Daci_2096 2301503 - 2300931 - | resolvase domain-containing protein TERM 1788 2301767 - 2301742 - R 74 -3.9 -4.75372 | opp_overlap 2301753, overlap 2301753 ACGACGCAGCAAAAA CCTGATCAAGA CGCG CCGTGAGCAGG AGCGCTTTGACGTTC Daci_2097 2302772 - 2301747 - | zonular occludens toxin Daci_2098 2303063 - 2302773 - | hypothetical protein Daci_2099 2303830 - 2303063 - | hypothetical protein TERM 1789 2303134 - 2303121 - G 72 -5.3 -4.51197 | opp_overlap 2303121 2303119, overlap 2303116 GACAACCAAGCAAAA CCAAT AAGG ATTGG TCTTATTCCTGTGGC Daci_2100 2304350 - 2303871 - | hypothetical protein TERM 1790 2304244 - 2304223 - G 78 -6.5 -4.54727 | TTGCCCAAATTAAAA GTGCCAGCA GATC CGCCGACAC TAGTGGGACTCCAAC Daci_2101 2305083 - 2304862 - | hypothetical protein TERM 1791 2305129 - 2305109 - R 74 -5.4 -4.45771 | overlap 2305110 ATTTGAAAAGAGAAA CGATGCTG CGAAT CAGCACCA GCAAACCCCGCACGC Daci_2102 2305732 - 2305412 - | putative phage associated protein Daci_2103 2306859 - 2305753 - | replication initiation factor TERM 1792 2306556 - 2306572 + g 70 -4.3 -4.48987 | overlap 2306539 2306557 CGCCTGCGCTGACGC TGGCCAC TTC GTGACCG TTTTCGTTGTCGACC TERM 1793 2306830 - 2306841 + g 89 -5.8 -5.23396 | CTTGACGCGACCGCC CTCG ATGA CGAG TTTTTCTTCGTTATT TERM 1794 2306975 - 2306917 - R 78 -13.3 -3.13403 | gap 5, overlap 2306915 GGGGGGGTATGAAGA CGTGCCGCTGCGGCCGCGGCG-CCTGC-GC TAAA GCTGCATGTCACCGCGGCCGCAGCGGC--- ATCACCCAAGGCTCC Daci_2104 2307998 - 2307642 - | hypothetical protein TERM 1795 2308074 - 2308053 - H 72 -2.4 -4.81551 | gap 1, overlap 2308023 2308057 CATGTACATGAAAAA TCTATGTAG ACATG CTACA-AGA GTAATTCTTGTAAGT Daci_2105 2308127 - 2308426 + | hypothetical protein TERM 1796 2308559 - 2308580 + T 100 -17.3 -5.08824 | opp_overlap 2308559 CGGGGGCGTAAAAAA GGCGCCCCT GTGA AGGGGCGCC TTTTTTGGGTGCGGC TERM 1797 2308580 - 2308559 - T 100 -17.3 -5.00616 | opp_overlap 2308559 CGGGGGCGTAAAAAA GGCGCCCCT GTGA AGGGGCGCC TTTTTTGGGTGCGGC Daci_2106 2310898 - 2308601 - | malic enzyme TERM 1798 2311020 - 2310991 - R 100 -17.1 -3.79906 | GGATTTCGACAACAA GCCCCCTGGCGCC TATG GACGGCAGGGGGC GCACAGCCCGGCGGG TERM 1799 2311056 - 2311078 + r 80 -11.3 -3.76224 | gap 1, overlap 2311057 CGGGCGATTGTTGGG C-GTGCCCGC CAGG GCGGGCACTG TTTCATCAGTGGGCG TERM 1800 2311057 - 2311076 + r 90 -15 -3.46647 | overlap 2311056 GGGCGATTGTTGGGC GTGCCCGC CAGG GCGGGCAC TGTTTCATCAGTGGG Daci_2107 2312571 - 2311084 - | xanthine permease TERM 1801 2312185 - 2312173 - G 72 -3.3 -4.57073 | overlap 2312174 CACGGGCGGGAAAAA GCGCA GCA TGCGG CTGATCAGCGGGGCG TERM 1802 2312809 - 2312787 - R 77 -14.9 -2.70932 | GCCGCCTGGCAAGCA CCAGGCACC GTGCT GGTGCCTGG CGGCCGCTGTGGCGC TERM 1803 2312940 - 2312924 - R 100 -15.1 -5.00616 | opp_overlap 2312924 2312938 CCCGGGCGCAAAAAA GCCCGGC GGC GCCGGGC TTGGGTGTCAGGCCT TERM 1804 2312924 - 2312940 + r 80 -15.1 -3.1247 | opp_overlap 2312924, overlap 2312938 CCCGGGCGCAAAAAA GCCCGGC GGC GCCGGGC TTGGGTGTCAGGCCT Daci_2108 2314268 - 2312976 - | peptidase dimerisation domain-containing protein TERM 1805 2313581 - 2313622 + g 73 -16.5 -2.56095 | overlap 2313571 2313577 GCAGCGCGTCCACGC CCGTGTGGGGCACGGCGGC GTGG GCCATCTTGCCCTGCACGG TCACTTCCATCTGCA Daci_2109 2316040 - 2314265 - | unknown domain/N-carbamoyl-L-amino acid hydrolase fusion protein TERM 1806 2314739 - 2314751 + g 78 -10.5 -4.2349 | overlap 2314738 CACCGAGGTGCCGTC GCGCG CGG CGCGC TTTTCGATGTACAGC TERM 1807 2315032 - 2315048 + g 72 -6.5 -4.25283 | overlap 2315033 TGGCCTCGCGCAGGG TGATGCC GTC GGCATCC TTTTGCTCCAGCCAT TERM 1808 2315464 - 2315474 + g 72 -6.8 -4.26076 | overlap 2315460 ATCCCGGGTCGCTGT GCTG GGC CAGC TTTTCCTGCCAGTCC Daci_2110 2317003 - 2316047 - | urate catabolism protein Daci_2111 2317677 - 2317000 - | GntR family transcriptional regulator TERM 1809 2317565 - 2317536 - G 74 -15.7 -3.05343 | GCGACAGCTGGAACA GCGCCTGGCGCAC CAGG GTGCGCGAGACGC CGAAATGGTCTGCCA Daci_2112 2318687 - 2317764 - | LysR family transcriptional regulator TERM 1810 2318030 - 2318055 + g 70 -12.5 -3.35679 | overlap 2318008 2318031 TGTCGCGCAGGCGGA TGGCCTCGGTC TTGC GGCCGGGGCCG TTGTGGGTGAAGCGC Daci_2113 2318812 - 2319918 + | tartrate dehydrogenase Daci_2114 2319971 - 2320948 + | hypothetical protein TERM 1811 2322054 - 2322105 + G 74 -13.4 -3.35996 | gap 1 GACCACGGTCACCAT CCGGCAGCGCCCGGCCGGCACGCCC AAG GGGCGCGGCGGCCGCGCGG-GCGAG TTCTGCATGGGGCTG Daci_2115 2321053 - 2322375 + | hydroxypyruvate reductase TERM 1812 2322406 - 2322430 + T 78 -9.9 -3.92542 | GGGTGGTTGTTTTTC GAGGCCGGG GCGTGCG CCCGGCCAC TTGTTTCAGGCTCGC Daci_2116 2323376 - 2322459 - | LysR family transcriptional regulator TERM 1813 2323566 - 2323546 - g 71 -2.5 -4.56597 | overlap 2323551 CGCGTGCTGGAAAAA GAAGGCG TGACCGT CGCATTC GGCGTTCCCGGTGCC Daci_2117 2323498 - 2325288 + | glyoxylate carboligase TERM 1814 2325314 - 2325330 + F 88 -6.5 -4.96848 | ACGGCACATCGCACG GCATTGC ACT GCACTGC TTTTTCTATCGGCGG TERM 1815 2326013 - 2325988 - g 75 -9.7 -4.09685 | gap 1 GGCCACGCTGCAAAA GCACCTGGCGCG CAT CG-GCCATGTGC AGCTGGCCGACAACC Daci_2118 2325404 - 2326204 + | hydroxypyruvate isomerase Daci_2119 2326255 - 2327169 + | 2-hydroxy-3-oxopropionate reductase TERM 1816 2327201 - 2327219 + T 74 -13.1 -3.21276 | overlap 2327199 CAACGATTGGTGGGA GGGCGGC CTTGC GCCGCCC TGTTGTGAAAAGCCG TERM 1817 2327254 - 2327231 - T 95 -15.2 -4.07568 | opp_overlap 2327231 GCCCTGTTGTGAAAA GCCGCGCTCG GCAA CGGGCGCGGC TTTTTCTTGCTTCAA TERM 1818 2327231 - 2327254 + T 100 -17.4 -5.1963 | opp_overlap 2327231 GCCCTGTTGTGAAAA GCCGCGCTCG GCAA CGGGCGCGGC TTTTTCTTGCTTCAA Daci_2120 2329086 - 2327266 - | gamma-glutamyltransferase TERM 1819 2328303 - 2328331 + g 79 -10.9 -4.07568 | overlap 2328304 2328306 TGGAGCCCTGCTGGC CGATCAGGCGCAG CGA CTGCGCCAGGTCC TTTTGCACCAGGCGG TERM 1820 2329331 - 2329309 - H 72 -2.6 -4.84017 | opp_overlap 2329329 AAGGGCGTACAAAAA CTGTATACAC TTT GCGAATGCAG GGCAGGGCCGCGAGT Daci_2121 2329426 - 2329776 + | hydroxyisourate hydrolase TERM 1821 2329835 - 2329860 + T 100 -15.5 -4.11216 | gap 1, opp_overlap 2329831 2329824 2329838, overlap 2329838 2329840 GAAACCTGAAATGAC G-AACGGCCCGC ATT GCGGGCCGTTGC TTTTGGGGCTCCAGC TERM 1822 2329838 - 2329856 + T 100 -17.4 -3.67622 | opp_overlap 2329831 2329824 2329838, overlap 2329835 2329840 ACCTGAAATGACGAA CGGCCCGC ATT GCGGGCCG TTGCTTTTGGGGCTC TERM 1823 2329856 - 2329838 - T 93 -17.4 -3.33037 | opp_overlap 2329838 2329835 2329840, overlap 2329831 2329824 ACCTGAAATGACGAA CGGCCCGC ATT GCGGGCCG TTGCTTTTGGGGCTC Daci_2122 2330276 - 2329887 - | DoxX family protein Daci_2123 2330593 - 2331177 + | putative lipoprotein TERM 1824 2331222 - 2331207 - T 82 -11.8 -3.90112 | opp_overlap 2331207 GGCCTTTGAACGAAA CCGGCC TGCG GGCCGG TTTTTCTTTGTGCGG TERM 1825 2331207 - 2331222 + T 100 -11.8 -5.38054 | opp_overlap 2331207 GGCCTTTGAACGAAA CCGGCC TGCG GGCCGG TTTTTCTTTGTGCGG TERM 1826 2331246 - 2331266 + T 81 -13.9 -3.34895 | overlap 2331248 TGTGCGGTCGTCTCA GTCGGCGCC AGC GGCGCCGTC TTCATTGGCGCTGCC TERM 1827 2331248 - 2331264 + T 82 -15.1 -3.24329 | overlap 2331246 TGCGGTCGTCTCAGT CGGCGCC AGC GGCGCCG TCTTCATTGGCGCTG Daci_2124 2331572 - 2331243 - | Arc domain-containing protein Daci_2125 2331666 - 2332055 + | hypothetical protein Daci_2126 2332506 - 2332099 - | hypothetical protein Daci_2127 2332718 - 2333602 + | xanthine dehydrogenase accessory protein XdhC TERM 1828 2333673 - 2333710 + F 84 -3.4 -5.22006 | gap 2, opp_overlap 2333667, overlap 2333674 CTACGAAATGGTCGC AGCGGTGCACCGGCGGTA TATC TACCG--GGTGCGCGGCC TTTTTCTTCTGCTCA TERM 1829 2334995 - 2334958 - g 72 -6.1 -4.25256 | overlap 2334959 CCTGCAGCAAAAGAA TGTGCGCCTGGACTCGC CCGA GCAGGTCAAGGCCCACG CCCAGCAGATCTACC Daci_2128 2333789 - 2335120 + | hypothetical protein TERM 1830 2335182 - 2335209 + T 100 -17 -4.32857 | GGCGGCCAGCCACCA GCCCGCAGCCTC GCAA GAGCCTGCGGGC TTTCTGTTTCAGGCA Daci_2129 2337101 - 2335218 - | diguanylate cyclase/phosphodiesterase Daci_2130 2337299 - 2337877 + | CRP/FNR family transcriptional regulator Daci_2131 2337998 - 2340280 + | diguanylate cyclase Daci_2132 2340992 - 2340297 - | Crp/FNR family transcriptional regulator Daci_2133 2343385 - 2341094 - | hypothetical protein TERM 1831 2342555 - 2342596 + g 72 -3.5 -4.56597 | GAAGCGGTTGCCCGA GGCTGAGGCGCCGAACTTC CACA GCAGCTTGCCGTTCCAGCC TTTTTGCGGAGCCCA Daci_2134 2343668 - 2344600 + | LysR family transcriptional regulator TERM 1832 2344606 - 2344621 + F 78 -7.5 -4.72272 | opp_overlap 2344617 TGCCCGCTAGGCGAT GGCGG CAGGAA CCGCC TTTTTGGTGGACAAA Daci_2135 2344721 - 2346322 + | ABC transporter related TERM 1833 2346966 - 2347022 + G 78 -8.7 -4.25104 | overlap 2346961 CTGTTCCGCACCCGC GCCGGCTTTGCGCTGCAG--GTCGGTGGC CTG GCC-CCGGCTGCTGC-GCGCTACGCGGGC TTTTCCTCGCGCCGC Daci_2136 2346309 - 2347415 + | inner-membrane translocator Daci_2137 2347415 - 2348335 + | inner-membrane translocator TERM 1834 2348389 - 2348374 - f 85 -2.5 -5.32944 | overlap 2348381 2348382 TCCAGAACCAAAAAA GGACA AACGCA TGCCC GCTTTGCGCGAACGC TERM 1835 2349157 - 2349127 - g 73 -12.6 -3.43203 | overlap 2349094 2349128 CTACCAGAACACCAA CTCCCCGGCCGT GCTCAAG ACGGCCGAGGAA CGCGGTGCGCGCGCC Daci_2138 2348384 - 2349556 + | basic membrane lipoprotein TERM 1836 2349562 - 2349581 + T 70 -10.6 -3.54475 | opp_overlap 2349557 CGCCAAGTAAGCGCA GGCGCCGC ATGC GCGGCGGC TTGTCTAGTGCGGGG Daci_2139 2351016 - 2349586 - | histidine kinase TERM 1837 2350511 - 2350461 - G 75 -4.5 -4.58395 | gap 1, overlap 2350462 2350464 2350465 CCCACGCCGGAAAAA CCAGCAGCGGCGCGCTGAT-CAGC AGGG GCAGCACCAGCAGGCTGCTGGAGG CCAGCGTGAGCATGC Daci_2140 2351693 - 2351013 - | two component transcriptional regulator Daci_2141 2351835 - 2353304 + | peptidase S41 TERM 1838 2353431 - 2353457 + F 93 -14.4 -3.73647 | CTCTGGACCCATCGC GGCAGGCCTGCG CCC TGCAGACCTGCC TTCTTCCTGCCTGCC Daci_2142 2353497 - 2354654 + | basic membrane lipoprotein TERM 1839 2354677 - 2354661 - f 72 -11.5 -3.30128 | overlap 2354655 2354659 AGCAAGTAAGCAAGA CGCCAGG CCC CCCGGCG CAGGCCGGGCTGCCC TERM 1840 2354698 - 2354727 + F 100 -22.9 -3.14132 | overlap 2354724 2354725 CGGGCTGCCCGCTGC CGCCAGGGCCGCC TTCG GGCGGCCTTGGCG TTCATGCGCAGCACA TERM 1841 2354728 - 2354769 + F 73 -13.9 -2.72152 | gap 1, overlap 2354725 2354724 CGGGCGGCCTTGGCG TTC-ATGCGCAGCACAGTTG CCG TACCTGTGCTGCGCATCGAG TGGGTTTATGCTCGC Daci_2143 2354731 - 2355849 + | Rieske (2Fe-2S) domain-containing protein Daci_2144 2355849 - 2356898 + | adenosine deaminase Daci_2145 2357345 - 2356905 - | histidine triad (HIT) protein TERM 1842 2357747 - 2357775 + H 100 -15.3 -4.54727 | opp_overlap 2357740 CCTATAATCGCGCCC CGCACCGGCCG CTGCCCA TGGCCGGTGCG TTTTCATTTCCGGGC TERM 1843 2357845 - 2357818 - g 100 -11.2 -4.88736 | opp_overlap 2357817 2357819, overlap 2357819 CACCATGTACAAAAA CCTCGCAGCCGC AGTC GCGGCCGCAAGT CTTGTATCCACGGCC TERM 1844 2357844 - 2357819 - g 82 -14.7 -3.52519 | opp_overlap 2357817 2357819, overlap 2357818 ACCATGTACAAAAAC CTCGCAGCCGC AGTC GCGGCCGCAAG TCTTGTATCCACGGC TERM 1845 2358257 - 2358289 + G 80 -16.2 -3.22491 | opp_overlap 2358276, overlap 2358284 CTGTCAGGCATTGCC GCCGGCCGTGCCAG CAAGA CGGGCGTGGCCGGC TTCGTGGTCGGCTTT Daci_2146 2357807 - 2358913 + | basic membrane lipoprotein Daci_2147 2358954 - 2360318 + | guanine deaminase TERM 1846 2360331 - 2360316 - f 74 -6.8 -4.4078 | overlap 2360318 GTTTCTCAAGCAAAA TAGCGC CTTT GCGCCA GTGCCCTGCCGGGTG Daci_2148 2360354 - 2360959 + | deoxycytidine triphosphate deaminase TERM 1847 2361004 - 2360981 - T 100 -19.6 -3.66784 | opp_overlap 2360981 TGACCCGGAAGACAA GGCCCGCAGC GAAA GCTGCGGGCC TTTTTCATTCGACCA TERM 1848 2360981 - 2361004 + T 100 -19.6 -4.8622 | opp_overlap 2360981 TGACCCGGAAGACAA GGCCCGCAGC GAAA GCTGCGGGCC TTTTTCATTCGACCA Daci_2149 2362508 - 2361009 - | L-aspartate oxidase Daci_2150 2363652 - 2362519 - | quinolinate synthetase TERM 1849 2363832 - 2363780 - R 89 -12.7 -4.08945 | gap 3, opp_overlap 2363800, overlap 2363781 ACGAGGGCGGGAAAA GCGGCGCGGGGCCGCCTCAGCGCTGC AGCT GCA-CGTTGTTGCGGCCC-GCGCC-C TTGGCCTCGTACAGC TERM 1850 2363832 - 2363781 - R 72 -12.9 -3.05046 | gap 2, opp_overlap 2363800, overlap 2363780 CGAGGGCGGGAAAAG CGGCGCGGGGCCGCCTCAGCGCTGC AGCT GCA-CGTTGTTGCGGCCC-GCGCCC TTGGCCTCGTACAGC Daci_2151 2365547 - 2363796 - | diguanylate cyclase Daci_2152 2366510 - 2365563 - | ornithine cyclodeaminase TERM 1851 2366809 - 2366753 - g 100 -26.7 -3.15544 | TGGCAGCGCGAGCAA CCGCCCAGCGAGCAGGCTC-CCGCGCC CCGCC GGCACGGCGAGCCTGCACGC-GAGCGG CGCAGGCGCGGCGGA Daci_2153 2366603 - 2366968 + | hypothetical protein Daci_2154 2367077 - 2367955 + | protein of unknown function zinc metallopeptidase putative TERM 1852 2367993 - 2368013 + F 100 -12.5 -4.8048 | overlap 2367994 GCTGCGCAAGCTTCG CCGGCCCCT GCG AGGGGCCGC TTTTTCATCTGGAGG TERM 1853 2367994 - 2368012 + F 93 -16 -3.47806 | overlap 2367993 CTGCGCAAGCTTCGC CGGCCCCT GCG AGGGGCCG CTTTTTCATCTGGAG TERM 1854 2368064 - 2368048 - f 100 -9.3 -5.14563 | overlap 2368049 CCGGCGACGAAAAAA TGCCCGC ATT GCGGGCC CTCATACCGGGTTTT TERM 1855 2368063 - 2368049 - f 82 -12.8 -3.68256 | overlap 2368048 CGGCGACGAAAAAAT GCCCGC ATT GCGGGC CCTCATACCGGGTTT TERM 1856 2368395 - 2368420 + G 74 -14 -3.37533 | overlap 2368389 AAAATACCTCCGCTT CGCCTGCACG CCACCC CGTGCGGGCG TTGGTGCTTTTGCCC Daci_2155 2368175 - 2369689 + | DEAD/DEAH box helicase domain-containing protein TERM 1857 2369721 - 2369737 + T 100 -13.7 -5.14563 | opp_overlap 2369721 CTGCCTCACGAAAAA CGCCTGC CTA GCAGGCG TTTTTTCATGGGCGC TERM 1858 2369737 - 2369721 - T 100 -13.7 -4.72272 | opp_overlap 2369721 CTGCCTCACGAAAAA CGCCTGC CTA GCAGGCG TTTTTTCATGGGCGC Daci_2156 2370620 - 2369775 - | diadenosine tetraphosphatase TERM 1859 2371470 - 2371504 + G 79 -11.5 -4.00042 | gap 1 TTGGGCTCGGATGCC GCCGGCACCACGCTGT ACGA ACA-TGTGCTGCCGGC TTCTTTCCTGCCCGA Daci_2157 2370645 - 2371958 + | hypothetical protein Daci_2158 2372059 - 2372349 + | histone family protein nucleoid-structuring protein H-NS TERM 1860 2372388 - 2372372 - f 70 -10.8 -3.44848 | opp_overlap 2372372, overlap 2372370 GTCGCGCATGAAAGA GCCCGC CCAGT GCGGGC TTTTTTCATTGTCAC TERM 1861 2372372 - 2372388 + F 100 -10.8 -5.32944 | opp_overlap 2372370 2372372 GTCGCGCATGAAAGA GCCCGC CCAGT GCGGGC TTTTTTCATTGTCAC TERM 1862 2372564 - 2372579 + F 70 -3.2 -4.66953 | gap 1, overlap 2372567 TATGGCAGTCTGGTG CGTGGCG AGA TGCC-CG TTTTTGGGATCTTGA TERM 1863 2372719 - 2372682 - f 93 -15.5 -3.65046 | overlap 2372685 GTCCGACTTGAATAA TCAGGCCCCGGCCGCCA TGGG TGGCGGCAGGGGCACAA TACGCACATGAACAA TERM 1864 2372716 - 2372685 - f 85 -17.2 -2.94045 | overlap 2372682 CGACTTGAATAATCA GGCCCCGGCCGCCA TGGG TGGCGGCAGGGGCA CAATACGCACATGAA Daci_2159 2372727 - 2373935 + | monooxygenase FAD-binding Daci_2160 2375249 - 2373948 - | major facilitator transporter Daci_2161 2376216 - 2375341 - | tryptophan 2,3-dioxygenase TERM 1865 2376833 - 2376859 + G 71 -10.8 -3.59979 | GGCGACGACGCAGAG GCCCTGGTGCAG GAC CTGCAGCAGCGC TTTCCGCTGGCCGAG Daci_2162 2376380 - 2377300 + | AraC family transcriptional regulator TERM 1866 2377526 - 2377583 + G 70 -15 -2.78463 | gap 3 GCGAAGAGGCGGCCG TGGTGCAGGCC--CGATGGCGCCTGC-CC GCC GGTGCAGGCGCCATCGCCGGCATGGACGA TGTGCTGGCCGCCAT Daci_2163 2377297 - 2378283 + | HhH-GPD family protein Daci_2164 2379605 - 2378301 - | kynureninase TERM 1867 2378848 - 2378830 - G 78 -12.4 -3.67976 | GGCACGAACTTGAAA GGCTCGGC ATG GCCGAACC AGCCCGACAGCGGCT TERM 1868 2379662 - 2379644 - R 89 -11.6 -4.24002 | GGCGAAAGGCGAAAA GCGCGGGC AGG GCCGGCGC CGCAATGCGGGCAGG Daci_2165 2380309 - 2379680 - | arylformamidase Daci_2166 2381702 - 2380314 - | amino acid permease-associated region Daci_2167 2382629 - 2381844 - | AraC family transcriptional regulator Daci_2168 2383262 - 2382642 - | lysine exporter protein LysE/YggA Daci_2169 2383814 - 2383368 - | endoribonuclease L-PSP Daci_2170 2384767 - 2383907 - | tryptophan 2,3-dioxygenase Daci_2171 2385969 - 2384764 - | aromatic amino acid aminotransferase Daci_2172 2387478 - 2386045 - | amino acid permease-associated region Daci_2173 2387617 - 2388087 + | AsnC family transcriptional regulator Daci_2174 2388560 - 2388135 - | hypothetical protein Daci_2175 2388655 - 2388996 + | FeoA family protein Daci_2176 2388993 - 2390936 + | ferrous iron transport protein B Daci_2177 2390951 - 2391145 + | hypothetical protein TERM 1869 2391178 - 2391210 + T 100 -22.2 -5.00884 | opp_overlap 2391178 CCACCGGGAAAAAAA GAATGCCTGCAGGC GCAAA GCCTGCAGGCATTC TTTTTTGAGCGGACT TERM 1870 2391210 - 2391178 - T 100 -22.2 -5.42259 | opp_overlap 2391178 CCACCGGGAAAAAAA GAATGCCTGCAGGC GCAAA GCCTGCAGGCATTC TTTTTTGAGCGGACT Daci_2178 2392164 - 2391232 - | ornithine carbamoyltransferase Daci_2179 2393371 - 2392175 - | acetylornithine aminotransferase TERM 1871 2393431 - 2393401 - H 76 -9.7 -4.06502 | gap 1, overlap 2393402 GAGCTGGAAAGTAAA CGGCATCCG-GGCG TTGC CGCCGCAGATGCCT GAAAAACAGCGAAGC TERM 1872 2393430 - 2393402 - H 76 -13.2 -3.03419 | gap 1, overlap 2393401 AGCTGGAAAGTAAAC GGCATCCG-GGCG TTGC CGCCGCAGATGCC TGAAAAACAGCGAAG TERM 1873 2393591 - 2393571 - H 70 -3.9 -4.72127 | opp_overlap 2393575 2393580, overlap 2393572 ATATAAGAGATAAAA TGCCGGC TTGGCCT GCTGGCA GCGATTCTGCCTGTG TERM 1874 2393575 - 2393615 + H 78 -3 -5.01732 | opp_overlap 2393572 2393571, overlap 2393580 AAGAGATAAAATGCC GGCTTGGCCTGCTGGCAG CGATT CTGCCTGTGGGCTCTGAC TTTTTTGAAGGACTT Daci_2180 2393722 - 2394039 + | hypothetical protein TERM 1875 2394025 - 2394049 + T 100 -9.3 -5.42259 | gap 1, overlap 2394027 TGCCTGATACCGGAC GA-GCCGGCC CGCTGA GGCCGGCTTC TTTTTTTGCGGGTCG TERM 1876 2394027 - 2394046 + T 100 -12.1 -4.79949 | overlap 2394025 CCTGATACCGGACGA GCCGGCC CGCTGA GGCCGGC TTCTTTTTTTGCGGG TERM 1877 2394083 - 2394097 + T 100 -9.2 -5.79526 | CCGTCCGATGTGAAG CGCGCC TGG GGTGCG TTTTTTTTCGCCTGT TERM 1878 2394113 - 2394129 + T 84 -3.6 -5.1675 | TTTTTTTTCGCCTGT GCTCCG GAGGG TGGGGC TTTTTTGCTGGATCC TERM 1879 2394193 - 2394180 - T 100 -9.5 -5.64274 | opp_overlap 2394175 2394180 TCAGGCACAAAAAAA CCGCC CGAA GGCGG TTTTCTCGTTCGCTG TERM 1880 2394180 - 2394193 + T 84 -9.5 -4.55491 | opp_overlap 2394180, overlap 2394175 TCAGGCACAAAAAAA CCGCC CGAA GGCGG TTTTCTCGTTCGCTG Daci_2181 2394562 - 2394269 - | ribosomal protein S20 Daci_2182 2394587 - 2396308 + | integral membrane protein MviN Daci_2183 2396367 - 2397212 + | hypothetical protein Daci_2184 2398301 - 2397243 - | hypothetical protein Daci_2185 2399371 - 2398319 - | phosphoribosylformylglycinamidine cyclo-ligase TERM 1881 2399536 - 2399555 + H 89 -16.4 -3.33261 | overlap 2399552 CTAAAATCCCTCGTC CGCCCGGG AGCT CCCGGGCG TTGTCCGCCTTGCCG TERM 1882 2399552 - 2399596 + H 71 -9.2 -3.83026 | gap 1, overlap 2399536 2399557 2399558 GCCCGGGAGCTCCCG GGCGTTGTCCGCCTTGCCGCA GCGC TGCGCCGAGGCGGGCC-TGTC TTTGCTCTCAACCCA TERM 1883 2399557 - 2399592 + H 81 -13.2 -3.32402 | overlap 2399552 2399558 GGAGCTCCCGGGCGT TGTCCGCCTTGCCGCA GCGC TGCGCCGAGGCGGGCC TGTCTTTGCTCTCAA TERM 1884 2399558 - 2399591 + H 83 -16.7 -2.58959 | overlap 2399557 2399552 GAGCTCCCGGGCGTT GTCCGCCTTGCCGCA GCGC TGCGCCGAGGCGGGC CTGTCTTTGCTCTCA TERM 1885 2399732 - 2399748 + G 77 -4.3 -4.7497 | opp_overlap 2399720, overlap 2399720 2399719 TCAGCATGGCGTCGA GTCCGAC GCT GTCGCGC TTTTTCGTCGGTCCC TERM 1886 2400205 - 2400191 - g 78 -12.8 -3.73072 | AACTGCTCGATGAAA CCGCGC GCC GCGCGG TGCTGCGCCAGGAGG TERM 1887 2400211 - 2400235 + G 89 -7.8 -4.82901 | gap 1 CGCCGCGCGGTGCTG CGCCAGGAGGC CGAT GCC-CGTGGCG TTTTTCTGGGCGACG Daci_2186 2399686 - 2400393 + | DnaA regulatory inactivator Hda TERM 1888 2400432 - 2400465 + F 95 -6.5 -5.45726 | overlap 2400433 GACTGCGGGAGCCGG CGGAGCCTGCGTTGC AAGG GCAGCGCGGGACCCA TTTTTTTAGGATATG TERM 1889 2400433 - 2400464 + F 78 -10 -3.86351 | overlap 2400432 ACTGCGGGAGCCGGC GGAGCCTGCGTTGC AAGG GCAGCGCGGGACCC ATTTTTTTAGGATAT Daci_2187 2400482 - 2401183 + | HAD family hydrolase Daci_2188 2401180 - 2402769 + | poly(A) polymerase Daci_2189 2402744 - 2403283 + | 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase TERM 1890 2403885 - 2403908 + G 77 -3.7 -4.72272 | overlap 2403887 GCGCGCCGGGTGCTG CTGGTGCTG GCGGTG CAGCCCCTG TTTTTCGTCGGCGGC TERM 1891 2404215 - 2404238 + G 82 -6 -4.6856 | gap 1 GTGCCCTGGTTTCTT GCCAT-GCAGC AGC GCTTCGATGGC TTTTTCCACTATTTC Daci_2190 2403465 - 2405090 + | glycosyl transferase family protein Daci_2191 2406038 - 2405100 - | hypothetical protein TERM 1892 2406105 - 2406127 + r 77 -4.1 -4.91459 | gap 1, opp_overlap 2406093, overlap 2406116 2406124 AATTGCGACACCTGG CTGCGC-GCA GGTA TGCAGAGCAG TTTTTCTGCGTATTG Daci_2192 2407212 - 2406160 - | CDP-6-deoxy-delta-3,4-glucoseen reductase TERM 1893 2407230 - 2407264 + H 82 -11.2 -3.90744 | overlap 2407233 TCTCGGTATCCTCGG GGGCGCTGGCGGGCGC GTG GAGCGCGCCGGCGATC TTCTTTCCCGGACGG TERM 1894 2407233 - 2407261 + H 73 -13.7 -2.72371 | overlap 2407230 CGGTATCCTCGGGGG CGCTGGCGGGCGC GTG GAGCGCGCCGGCG ATCTTCTTTCCCGGA TERM 1895 2407860 - 2407888 + G 75 -8.8 -4.11216 | gap 1 GCGTGCCGTGCGCTT TGCCGG-GCGCGG CGGG CTGCGCGCCAGCA TTTTGCGCATCCCGG TERM 1896 2407965 - 2407929 - g 82 -10.7 -4.11216 | opp_overlap 2407928 2407946, overlap 2407930 GCCGGACCGGGAAAA CGGCACGCCGCGCGG GCGCCTG CTGCGCGGCACGCCC CTGCTGTGCGCCGCA Daci_2193 2407360 - 2408301 + | NAD-dependent epimerase/dehydratase Daci_2194 2408977 - 2408303 - | hypothetical protein Daci_2195 2409737 - 2409075 - | hypothetical protein Daci_2196 2410294 - 2410836 + | 67-dimethyl-8-ribityllumazine synthase TERM 1897 2411904 - 2411893 - g 77 -3.6 -4.75174 | CACGGAATGGAAAAA GCGC TACG ACGC CAAGTACCCCGGCCA Daci_2197 2411012 - 2412142 + | extracellular ligand-binding receptor TERM 1898 2412168 - 2412184 + T 100 -10.8 -5.52384 | TTCCTTCGTTTTCAT GCCCGC CCCGT GCGGGC TTTTTTTCGTGCGCC Daci_2198 2413146 - 2412211 - | LysR family transcriptional regulator Daci_2199 2413270 - 2413923 + | NAD-dependent epimerase/dehydratase TERM 1899 2414135 - 2414164 + G 74 -14.3 -3.35679 | gap 1, overlap 2414135 GGCCATACGGACACT G-CGGGCTTCGGCG AGC CGCCCAAGCCCGAC TTCTGGATCAGCGGG Daci_2200 2414003 - 2414392 + | glyoxalase/bleomycin resistance protein/dioxygenase TERM 1900 2415639 - 2415677 + G 77 -10.8 -3.90318 | GGCTGGATCGGCGGC GGCCTGGTGGCGCTGGGC CTG GCCTGGTGCATCTGGGCC TTTGTGCGCTGGTCG Daci_2201 2414493 - 2415716 + | sugar efflux transporter Daci_2202 2416985 - 2415723 - | major facilitator transporter TERM 1901 2416728 - 2416683 - G 70 -15.3 -2.72839 | AATCACCGCCAAGGA CCCGATCACGGCGCGGCGC GGACCCAG GCGCCGCAGCGCGGCCGGG GCCAGCCAGGCGCCT Daci_2203 2417424 - 2416963 - | CMP/dCMP deaminase zinc-binding TERM 1902 2417161 - 2417127 - G 82 -6.3 -4.68103 | gap 1 CGAAGGCGAAGAAAA CCTGCTCGGCCCCGGC CATC ACCAGCGCCGC-CAGG CACATGGGGCAAGGG Daci_2204 2417500 - 2418420 + | LysR family transcriptional regulator TERM 1903 2418443 - 2418426 - T 100 -12.7 -5.055 | CGAAGCCTGAAAAAA TCCCCGC CGTG GCGGGGA TGGTCAGTGGGTGAC Daci_2205 2419441 - 2418467 - | hypothetical protein TERM 1904 2418616 - 2418662 + g 71 -11.4 -3.61398 | CCGGGTCCTGCAGCA CCTTGCGCGTGGCGGCGTTGAC CTT GTCCACGATGTCGCGCGGCAGG TTCTTGGGGCCGACG Daci_2206 2420826 - 2419579 - | L-carnitine dehydratase/bile acid-inducible protein F TERM 1905 2420010 - 2419960 - G 82 -14.7 -3.53012 | opp_overlap 2420006, overlap 2419961 2420006 GGTGTTGGTGGCAAA GCGCTCGTCCTGCGCC-CAGCCGGC TTC GCCGACGGCGGCGCAAAA-GCGCGC GAACTGCCCGTCATT TERM 1906 2420011 - 2419961 - G 70 -14.7 -2.71712 | gap 2, opp_overlap 2420006, overlap 2419960 2420006 GTGTTGGTGGCAAAG CGCTCG-TCCTGCGCC-CAGCCGGC TTC GCCGACGGCGGCGCAAAAGCGCGCG AACTGCCCGTCATTG Daci_2207 2422212 - 2421016 - | acyl-CoA dehydrogenase domain-containing protein Daci_2208 2422442 - 2423389 + | LysR family transcriptional regulator Daci_2209 2424256 - 2423510 - | LrgB family protein TERM 1907 2423681 - 2423667 - G 73 -7 -4.13945 | AGTCCCAGGGCAAAA CCCTGC ACG GCCGGG TCATCGCTGCGCACC Daci_2210 2424630 - 2424253 - | LrgA family protein TERM 1908 2424797 - 2424786 - H 85 -5.8 -5.11033 | CACAACTCGAAAAAA GGTG CGGC CACC GATTGCGCGGCTTCC Daci_2211 2424887 - 2425108 + | hypothetical protein TERM 1909 2425120 - 2425170 + F 74 -11.9 -3.53761 | gap 1, overlap 2425127 CTGAGGCGAGGTGTG TCAGGCG-CCTTCCGAATCGAGGG TTTT CCCTTGGATCTGGAGGTTGCCTGA TTTGCAGGCAGCTTA TERM 1910 2425297 - 2425282 - f 89 -10.4 -4.55295 | opp_overlap 2425282 CTGTGGAGAAAGAAA GCCACC TCAG GGTGGC TTTTTTCATTGGCTT TERM 1911 2425282 - 2425297 + F 100 -10.4 -5.29385 | opp_overlap 2425282 CTGTGGAGAAAGAAA GCCACC TCAG GGTGGC TTTTTTCATTGGCTT TERM 1912 2425708 - 2425745 + F 77 -14.3 -2.71268 | opp_overlap 2425710 2425721, overlap 2425705 2425721 AGCGGCCGGAAAAGA AATAGCCGAAAAAGCAG GGGA CTGCTTTTTCGGCTACG TAATCTCTGGTGCCC TERM 1913 2425743 - 2425710 - f 100 -21.3 -4.64861 | opp_overlap 2425708 2425705 2425721, overlap 2425721 CGGCCGGAAAAGAAA TAGCCGAAAAAGCAG GGGA CTGCTTTTTCGGCTA CGTAATCTCTGGTGC TERM 1914 2425732 - 2425721 - f 76 -5.8 -4.6856 | opp_overlap 2425721 2425708 2425705, overlap 2425710 GAAATAGCCGAAAAA GCAG GGGA CTGC TTTTTCGGCTACGTA TERM 1915 2425721 - 2425732 + F 76 -5.8 -4.62783 | opp_overlap 2425710 2425721, overlap 2425708 2425705 GAAATAGCCGAAAAA GCAG GGGA CTGC TTTTTCGGCTACGTA Daci_2212 2425859 - 2426782 + | cysteine synthase B TERM 1916 2426793 - 2426812 + F 95 -16.4 -3.82604 | opp_overlap 2426787 CCTGACACAGCGACA GGCCCGCC ACCT GGCGGGCC TTCTTGCTTGCATAG Daci_2213 2426860 - 2427462 + | NUDIX hydrolase Daci_2214 2427489 - 2427716 + | SirA family protein TERM 1917 2427771 - 2427742 - T 90 -15.1 -3.53012 | opp_overlap 2427748, overlap 2427748 GCGGTTCGCTCCAAA GAAAAAGGCCTGC TTTC GCAGGCCTTTTGC ATGGGGCAGGGGCGG TERM 1918 2427765 - 2427748 - T 100 -12.7 -5.27335 | opp_overlap 2427748, overlap 2427742 CGCTCCAAAGAAAAA GGCCTGC TTTC GCAGGCC TTTTGCATGGGGCAG TERM 1919 2427748 - 2427765 + T 95 -12.7 -4.18018 | opp_overlap 2427748 2427742 CGCTCCAAAGAAAAA GGCCTGC TTTC GCAGGCC TTTTGCATGGGGCAG Daci_2215 2428689 - 2427802 - | UTP-glucose-1-phosphate uridylyltransferase TERM 1920 2428063 - 2428096 + g 75 -8.7 -4.11371 | overlap 2428053 2428090 GTAGCGGCCAGCCAC GCCCATGCGCGAGGG GGCC TTCTCGGGCGCGGGC TTTTCCACGATCTTC Daci_2216 2431840 - 2428928 - | valyl-tRNA synthetase TERM 1921 2429178 - 2429206 + g 80 -15.9 -3.21099 | opp_overlap 2429143 2429141 ACCACGCAGACCGGG GCGGCCTGGGCGG CCT CGGCCCAGGCGGC TTCGTCGTCGAACAC TERM 1922 2430003 - 2430023 + g 81 -9.7 -4.32048 | TCGGCGCCGTAGGCG GGAATGCCC TCG GGGAATTCC TTTTGCGTGTTCTTG TERM 1923 2431724 - 2431745 + g 75 -8.7 -4.19238 | gap 1, overlap 2431723 GCCCGTGCCGCGCAC GC-CGGCTGC GCC GTAGCCGCGC TTTTCCCATTCAGGG TERM 1924 2431915 - 2431881 - R 79 -12.2 -3.53091 | opp_overlap 2431907, overlap 2431887 ATGGCGTTTGGCAAA TGAAAACGGCATCCGT TGA AGGGATGCCGTCTGCA TATGCGAAATGGATG TERM 1925 2431909 - 2431887 - R 95 -12 -4.54727 | opp_overlap 2431907, overlap 2431881 TTTGGCAAATGAAAA CGGCATCCGT TGA AGGGATGCCG TCTGCATATGCGAAA Daci_2217 2432616 - 2431987 - | glyoxalase/bleomycin resistance protein/dioxygenase Daci_2218 2432863 - 2433756 + | cation diffusion facilitator family transporter Daci_2219 2433795 - 2434043 + | hypothetical protein Daci_2220 2434063 - 2434416 + | hypothetical protein TERM 1926 2434410 - 2434430 + T 73 -8.9 -3.89346 | overlap 2434411 GGAGCTTGTTCCAGA GCCGTAGCG GAC CGCTGCGGG TTTATGCCGTGAAGG TERM 1927 2434411 - 2434429 + T 70 -12.4 -2.93393 | overlap 2434410 GAGCTTGTTCCAGAG CCGTAGCG GAC CGCTGCGG GTTTATGCCGTGAAG Daci_2221 2434839 - 2434432 - | hypothetical protein Daci_2222 2435207 - 2434860 - | hypothetical protein Daci_2223 2435925 - 2435242 - | FMN-binding negative transcriptional regulator TERM 1928 2437195 - 2437225 + G 78 -17.6 -2.79915 | ACCTGCCGGGTGCGG TGCAGGTCGAAGGC TCG GCCTCCGGCCTGCA TGTGGTGGCCTGGGT TERM 1929 2437480 - 2437458 - g 100 -20.6 -5.38047 | GATGGACAGAAAAAA GGCGGGGCCT TCG AGGCCCCGCC TTGCCGACGCTGAGG Daci_2224 2435961 - 2437493 + | transcriptional regulator Daci_2225 2441714 - 2437524 - | hypothetical protein TERM 1930 2441982 - 2441955 - R 100 -13.5 -5.91981 | gap 1, opp_overlap 2441955 AAAAGGCAAAAAAAA GCCCGTGA-CCG GCTTG CGGATCACGGGC TTTGGGCGGCAGCGC TERM 1931 2441955 - 2441982 + r 86 -13.5 -3.53012 | gap 1, opp_overlap 2441955 AAAAGGCAAAAAAAA GCCCGTGA-CCG GCTTG CGGATCACGGGC TTTGGGCGGCAGCGC Daci_2226 2442604 - 2442026 - | YceI family protein Daci_2227 2443246 - 2442674 - | YceI family protein Daci_2228 2443932 - 2443339 - | cytochrome B561 Daci_2229 2445450 - 2444143 - | HemY domain-containing protein Daci_2230 2446612 - 2445470 - | protein of unknown function DUF513 hemX Daci_2231 2447418 - 2446609 - | uroporphyrinogen III synthase HEM4 Daci_2232 2448370 - 2447432 - | porphobilinogen deaminase Daci_2233 2448483 - 2451332 + | phosphoenolpyruvate carboxylase TERM 1932 2451514 - 2451491 - g 72 -14.6 -2.87211 | gap 1 ACTGTTCCTGACACA GCGCCTGGCCA GGC TGGCC-GGCGC CAACTCCATGCGGGC Daci_2234 2451435 - 2453543 + | EAL domain-containing protein Daci_2235 2454137 - 2453595 - | transcriptional activator FlhC Daci_2236 2454491 - 2454165 - | flagellar transcriptional activator Daci_2237 2455726 - 2454812 - | rhodanese domain-containing protein Daci_2238 2456725 - 2455820 - | putative transmembrane protein TERM 1933 2457031 - 2457006 - R 95 -20.5 -2.52795 | overlap 2456976 2456993 AAGCGGCCCAATGCA GACGGCCCGCA CGAA TGCGGGCCGTC GGGAGAGCCGGAGCA Daci_2239 2458188 - 2457049 - | Rieske (2Fe-2S) domain-containing protein Daci_2240 2458529 - 2458765 + | exonuclease VII small subunit Daci_2241 2458774 - 2459724 + | polyprenyl synthetase TERM 1934 2460360 - 2460341 - g 72 -4.8 -4.4078 | overlap 2460342 GGCCGCCAAGCAAAA GGGCGAGG ACCG CCGCGCCA TCGCCGTCATCGGCG Daci_2242 2459892 - 2461808 + | 1-deoxy-D-xylulose-5-phosphate synthase TERM 1935 2461865 - 2461880 + F 70 -3.2 -4.62783 | gap 1, opp_overlap 2461844, overlap 2461844 2461862 GGAAAACCCCGTCCG CGCTTGC TTT GCG-GCG TTTTTAGAATCGATA TERM 1936 2461915 - 2461932 + F 100 -7.7 -5.75342 | overlap 2461916 CTGATACAGTGTGAA TGCACGT GCGA ACGTGCG TTTTTTTTGCCGCCG TERM 1937 2461916 - 2461931 + F 76 -9 -4.04482 | overlap 2461915 TGATACAGTGTGAAT GCACGT GCGA ACGTGC GTTTTTTTTGCCGCC TERM 1938 2461988 - 2461967 - f 91 -13.7 -3.97368 | gap 1 GCCCCAAGGCAGAAA GCGGCC-CCC TCG GGGTGGCCGC GGACCTTGCGCAGCA Daci_2243 2462057 - 2463139 + | TRAP dicarboxylate transporter- DctP subunit TERM 1939 2463203 - 2463242 + F 100 -16.4 -5.00616 | gap 1, opp_overlap 2463228, overlap 2463204 ACGCCTGCAGGCCAA GCCCG-CGTCCCCTCTGCG AAA TGCAGCGGGGACGGCGGGG TTTTTTGCCGCCGGG TERM 1940 2463204 - 2463241 + F 100 -19.9 -3.60048 | gap 1, opp_overlap 2463228, overlap 2463203 CGCCTGCAGGCCAAG CCCG-CGTCCCCTCTGCG AAA TGCAGCGGGGACGGCGGG GTTTTTTGCCGCCGG TERM 1941 2463295 - 2463275 - f 100 -13.9 -4.74103 | GCCCCAAGGCAAAAA GCGGCCCCC CTG GGGGGCAGC GGACCTTGCGCAGCA TERM 1942 2463351 - 2463377 + F 100 -17.3 -5.11613 | CCGATGATGTATGTG GGCCGGGCTGC CAAGA GCAGTCCGGCC TTTTTTGAATGCTCT TERM 1943 2463474 - 2463437 - g 91 -9.2 -4.84914 | gap 1, opp_overlap 2463446 2463448 2463450 ATGGACAGAAGAAAA GCACTCAAGCACGCCGG TCTGG CCGGTGTG-TTGACTGC CGCAGCGGCACCCGC Daci_2244 2463422 - 2464501 + | TRAP dicarboxylate transporter- DctP subunit TERM 1944 2464550 - 2464534 - T 90 -15.1 -3.55444 | opp_overlap 2464534 GCGTCATGCGGGAAA GCCGGGC ACT GCCCGGC TTTTTTCATGGGCGC TERM 1945 2464534 - 2464550 + T 100 -15.1 -5.14563 | opp_overlap 2464534 GCGTCATGCGGGAAA GCCGGGC ACT GCCCGGC TTTTTTCATGGGCGC TERM 1946 2464621 - 2464602 - T 100 -16.4 -5.26875 | opp_overlap 2464602 GCCCGAACGAAAAAA GGCCCCGC GGTT GCGGGGCC TTTGCTGTCCTTGAG TERM 1947 2464602 - 2464621 + T 95 -16.4 -3.889 | opp_overlap 2464602 GCCCGAACGAAAAAA GGCCCCGC GGTT GCGGGGCC TTTGCTGTCCTTGAG Daci_2245 2466477 - 2464648 - | TRAP dicarboxylate transporter, DctM subunit Daci_2246 2467103 - 2466495 - | tripartite ATP-independent periplasmic transporter DctQ Daci_2247 2468446 - 2467280 - | Fis family transcriptional regulator TERM 1948 2469188 - 2469158 - g 71 -2.5 -4.56597 | gap 2, overlap 2469140 2469139 2469159 GGCCGCCGTGAAAAA GGGCAGCCAGGCCAT GGC AGGGCCTG-C-GACC TGAGCGCCGCAGGCC Daci_2248 2468715 - 2469191 + | 2Fe-2S iron-sulfur cluster binding domain-containing protein TERM 1949 2470841 - 2470825 - g 70 -12.3 -3.29829 | GATACCCGTGGAGAA CGTGGAC ATC GTCCACG GCGACACGGGCCGTG Daci_2249 2469221 - 2471611 + | aldehyde oxidase and xanthine dehydrogenase molybdopterin binding Daci_2250 2471622 - 2472413 + | carbon-monoxide dehydrogenase (acceptor) Daci_2251 2472422 - 2473360 + | ATPase Daci_2252 2473357 - 2474631 + | VWA containing CoxE family protein Daci_2253 2474670 - 2475401 + | carbon monoxide dehydrogenase subunit G TERM 1950 2475673 - 2475634 - f 89 -10.7 -4.57837 | ATAGCCGCCGAAAAA CGCCAGGCGCCCAGC-TGC ACAG GCAAGCCAGGTGCC-GGCG TGGAGATTTGCAATG Daci_2254 2475686 - 2476756 + | hypothetical protein Daci_2255 2477139 - 2476753 - | dehydrogenase TERM 1951 2477405 - 2477390 - H 82 -9 -4.36914 | GTGCGGGCCAGAAAA CGCTCT GGTC AGAGCG GGTAAAGCCGGGGTA Daci_2256 2477561 - 2479177 + | RND family efflux transporter MFP subunit TERM 1952 2480498 - 2480486 - g 75 -10.5 -4.07568 | overlap 2480467 GCGCTTCGTGGAAAA GGGCG AGC CGCCC ATGCAGGCCGCGCTC Daci_2257 2479224 - 2482355 + | acriflavin resistance protein TERM 1953 2482390 - 2482415 + F 74 -6.7 -4.30719 | overlap 2482372 2482393 CTGGCGCCGCTGGCC GGGGTTCGGCC CGGC GGCCGACCTAC TTTCTTGTCGCGCGA TERM 1954 2482607 - 2482582 - f 78 -14.1 -3.25491 | gap 1, overlap 2482586 AAGTCAGATGACGAA GCAAGCCTGTCC TTC GG-CAGGCTTGC CACCCCGCATCGCGC TERM 1955 2483994 - 2483942 - g 74 -13.9 -3.28712 | CGTGGTGCTGGAGAA CGTGATGCGCCACATGGAGCGCGGC AAG ACCGCGCTGCGCGCGGCGCTGGACG GGGCGCGCGAGATCG Daci_2258 2482704 - 2485865 + | acriflavin resistance protein TERM 1956 2486198 - 2486151 - g 70 -14.7 -2.69964 | gap 1, opp_overlap 2486189, overlap 2486148 CCGGCAACCAGAGCA TTGCCCAGGCCGCC-GCGCGCC TGCGT GCCGCGCAGGCGGCCGTGGCCA GCAGCCAGGCCGGGC TERM 1957 2486833 - 2486872 + G 78 -14.3 -3.61715 | gap 2 GGCCGAGCGCCGCGT GGCCGC-CGC-CAATGCCC AGGT GGGCGTGGCGCGCGCGGCC TTCTTCCCGGCGCTC Daci_2259 2485862 - 2487388 + | RND efflux system outer membrane lipoprotein Daci_2260 2487757 - 2487392 - | hypothetical protein Daci_2261 2487890 - 2488543 + | ABC transporter related Daci_2262 2489390 - 2488581 - | LytTR family two component transcriptional regulator Daci_2263 2490659 - 2489550 - | signal transduction histidine kinase, LytS Daci_2264 2491003 - 2490668 - | hypothetical protein Daci_2265 2491598 - 2491038 - | membrane protein-like protein TERM 1958 2493210 - 2493162 - g 76 -13.7 -3.44527 | opp_overlap 2493200, overlap 2493192 2493193 CAGCTACGACTACAA CACGGGCGCGCAGACCGACAACT ACA AGAAGTCGGCCACCACGCCCATG CTGGGCCTGGTGTTC TERM 1959 2493749 - 2493770 + G 74 -12.9 -3.54653 | opp_overlap 2493736 AAGTGGCCTCCTGGA CGCGCACCG ACAT CGGCGCGCG TTATCTCATGGACAT Daci_2266 2491762 - 2493936 + | TonB-dependent siderophore receptor TERM 1960 2494449 - 2494467 + G 70 -8.8 -3.88291 | GGGCAGCCTGGCCCT GCTGTGGG TGG CCGACAGC TTTGTCGCGCTGCTG TERM 1961 2494521 - 2494511 - g 78 -8.2 -4.28361 | overlap 2494512 TCAAGCTCAGGAAAA GCGC CCC GCGC CTGACGGCGGCCGTG Daci_2267 2493955 - 2495184 + | PepSY-associated TM helix domain-containing protein TERM 1962 2495354 - 2495371 + T 72 -12.7 -3.06133 | opp_overlap 2495354 CGCCTAAACAGCAAA GCCACCG AAAA CGGTGGC TTCAATGAGGGCTTG TERM 1963 2495371 - 2495354 - T 89 -12.7 -4.00532 | opp_overlap 2495354 CGCCTAAACAGCAAA GCCACCG AAAA CGGTGGC TTCAATGAGGGCTTG TERM 1964 2495494 - 2495450 - T 78 -14.2 -3.14229 | gap 1, overlap 2495438 2495448 AGACGCCGAGCAAGA GCCGCCTCGCG-GCGAGGGCG TCGT CCCCCTCCCCCGCGAAGCGGG TAGAGAGGGGGAAGC Daci_2268 2495857 - 2495534 - | PsiF repeat-containing protein TERM 1965 2495868 - 2495900 + H 95 -19.1 -3.3506 | opp_overlap 2495867, overlap 2495860 2495869 CACATTGCAGCACAG TGCCGGGCGCGCAGC AAC GTTGCGGGCCCGGCG TTGTAAAAGTTTGCG TERM 1966 2495869 - 2495899 + H 95 -20.4 -2.60714 | opp_overlap 2495867, overlap 2495868 2495860 ACATTGCAGCACAGT GCCGGGCGCGCAGC AAC GTTGCGGGCCCGGC GTTGTAAAAGTTTGC TERM 1967 2496554 - 2496566 + G 75 -4.7 -4.5774 | overlap 2496523 GGGCCTGTCGCGCAA GGCGG CCA CCGAC TTTTCGTTCTTCCTG Daci_2269 2496006 - 2496833 + | undecaprenol kinase TERM 1968 2496861 - 2496876 + F 100 -10.4 -5.81032 | opp_overlap 2496861 CATCGATGGGGACAA GCCACC TTCG GGTGGC TTTTTTTTCGGCTTG TERM 1969 2496973 - 2497000 + F 85 -7.3 -4.8543 | TGAGGATGTTCTATG GTTATAAAAAA TATGTT TTTTTTATAAC TTTTTCTGAAGGTTG TERM 1970 2498339 - 2498388 + G 82 -15.7 -3.53012 | gap 1, overlap 2498340 CGCCCCTGCTGCCCG TGCGTGCG-GGCGAGATCCAGTGC CGT GAGCTGGGTGTCGCCGCGCACGCC TTTGACGAGCAAGGG TERM 1971 2498340 - 2498387 + G 81 -19.2 -2.71712 | gap 1, overlap 2498339 GCCCCTGCTGCCCGT GCGTGCG-GGCGAGATCCAGTGC CGT GAGCTGGGTGTCGCCGCGCACGC CTTTGACGAGCAAGG Daci_2270 2497042 - 2499006 + | acetoacetyl-CoA synthase Daci_2271 2499135 - 2499575 + | MarR family transcriptional regulator Daci_2272 2500575 - 2499715 - | alpha/beta hydrolase fold Daci_2273 2501630 - 2500572 - | proteasome-type protease-like protein TERM 1972 2501419 - 2501459 + g 78 -16.2 -3.09516 | gap 1 ATGTCGCCCGTGGCC TCGTCGCGC-AGCTGCTGG CTCT CCAGCAGCTCGCGCACCGA TTGGGTGATGGACAG Daci_2274 2504421 - 2501686 - | DNA mismatch repair protein MutS Daci_2275 2505388 - 2504594 - | hypothetical protein Daci_2276 2505611 - 2506255 + | XRE family transcriptional regulator Daci_2277 2506410 - 2507252 + | hypothetical protein Daci_2278 2507249 - 2508127 + | hypothetical protein Daci_2280 2508958 - 2508533 - | putative TIS1421-transposase orfA protein Daci_2281 2509835 - 2509125 - | GntR family transcriptional regulator TERM 1973 2509450 - 2509463 + g 71 -2.4 -4.60487 | AGCGTGGCGTCGTCG TCCA CGGCAA TGGA TTTTTCCAGGTCCTG Daci_2282 2509983 - 2510969 + | hypothetical protein TERM 1974 2511022 - 2511007 - g 82 -3.2 -5.02476 | opp_overlap 2511018, overlap 2511013 ACACGCTGCAAAAAA CAGAAC CCTC GCTCCG GGCACTGGCCGACGG Daci_2283 2510985 - 2511938 + | SMP-30/gluconolaconase/LRE domain-containing protein TERM 1975 2511981 - 2512000 + F 100 -4.2 -5.7946 | gap 1 GCTGGCGATTGTCAT GGCG-AGGG AGC CGCTACGCC TTTTTTTGTTGAACG Daci_2284 2512029 - 2513756 + | acetolactate synthase catalytic subunit Daci_2285 2513756 - 2514523 + | acetoacetyl-CoA reductase TERM 1976 2515410 - 2515396 - g 71 -2.1 -4.59853 | gap 1, overlap 2515397 TCAAGGCCGGAAAAA TGCGCC TGCT GGC-CA GCGCCAGCCCCATGC Daci_2286 2514723 - 2515715 + | hypothetical protein Daci_2287 2516563 - 2515847 - | arsenical resistance protein ArsH Daci_2288 2516981 - 2516550 - | arsenate reductase Daci_2289 2517336 - 2517007 - | ArsR family transcriptional regulator Daci_2290 2518519 - 2517422 - | hypothetical protein Daci_2291 2519531 - 2518599 - | hypothetical protein Daci_2292 2520417 - 2519590 - | hypothetical protein TERM 1977 2520680 - 2520717 + H 75 -2.9 -4.91852 | gap 2, overlap 2520665 2520680 2520681 CGCGGGCTGCCGCCC TGACG--TCTTGCCG TCACATGAAC CGGCAAGACTCGTCA TTTCTTTTTCATGCG TERM 1978 2521647 - 2521673 + G 72 -13.6 -3.14683 | overlap 2521635 2521631 ACCGATGCCGACGTG GGCGCCACGGCC CTG GGCGGTGGCGCG TTCATCGACCGCTAT Daci_2293 2520777 - 2522021 + | cyclopropane-fatty-acyl-phospholipid synthase TERM 1979 2522316 - 2522291 - f 78 -14.1 -3.25223 | gap 1 GAGTCAGATGACGAA GCAGTCCTGTCC TGC GG-CAGGACTGC AACCCCGCAGGCGGC TERM 1980 2522728 - 2522743 + G 75 -4.6 -4.57073 | overlap 2522730 GACCTGACGCGCGCT GGCGCT GTGG AGCGGC TTTTTGCAGAGGCTG TERM 1981 2522859 - 2522880 + G 86 -4.3 -5.1356 | opp_overlap 2522855 GTACGACGAGATGGC CGCCGTC AACGGCAA GTCGGCG TTTTTCTTCCTCAAG Daci_2294 2522509 - 2523282 + | short-chain dehydrogenase/reductase SDR TERM 1982 2524194 - 2524222 + G 95 -13.8 -4.2717 | gap 1 GCTGCTGTACCCGCA CCGCC-GCCAGCG CTCG CGCCGGCTGGCGG TTTTCATCGACTGGT Daci_2295 2523328 - 2524272 + | LysR family transcriptional regulator Daci_2296 2525350 - 2524226 - | fatty acid hydroxylase Daci_2297 2527794 - 2525674 - | peptidase S8 and S53 subtilisin kexin sedolisin TERM 1983 2527253 - 2527266 + g 71 -2.3 -4.57073 | GCCAGTTTCGTTCCG CAAGC ACTA GCATG TTTTTCCAAAGCATC Daci_2298 2528890 - 2527853 - | ATPase central domain-containing protein Daci_2300 2530033 - 2530866 + | hypothetical protein Daci_2301 2530874 - 2531629 + | hypothetical protein TERM 1984 2532069 - 2532057 - g 83 -9.1 -4.58395 | GCCATGCTGGAAAAA GAGCG CAT CGCTC ACGGCGACCTGCAGA Daci_2302 2531610 - 2533295 + | Mn2+-dependent serine/threonine protein kinase Daci_2303 2533365 - 2534183 + | hypothetical protein Daci_2304 2534992 - 2534597 - | XRE family transcriptional regulator TERM 1985 2534894 - 2534923 + g 84 -7.1 -4.75404 | opp_overlap 2534898 2534917, overlap 2534885 2534895 2534896 2534898 ACGGCCGCGTTTGAC AGGACGCTTTTGC ATGG GCAAGAGCGTCAG TTTTTGATGCAATTT Daci_2305 2535050 - 2535433 + | hypothetical protein Daci_2306 2535816 - 2535466 - | ArsR family transcriptional regulator TERM 1986 2537184 - 2537141 - g 70 -8.9 -3.8917 | gap 1, overlap 2537182 CGTCAAGGACAAGAA GGAGCGCATTGGC-CGCATC GTGCA GATGCATGCCAATGAACGCC TGGAGGTCGATGAAA TERM 1987 2537230 - 2537200 - g 88 -14.6 -3.73775 | overlap 2537182 2537201 TGGAGGTCGATGAAA TCCACGCCGGCGAC ATT GCCGCCTGCGTGGG CCTGAAGGACGTGAC TERM 1988 2537229 - 2537201 - g 80 -18.1 -2.84051 | overlap 2537182 2537200 GGAGGTCGATGAAAT CCACGCCGGCGAC ATT GCCGCCTGCGTGG GCCTGAAGGACGTGA Daci_2307 2536077 - 2538179 + | translation elongation factor G TERM 1989 2538235 - 2538182 - T 71 -6.6 -4.18197 | overlap 2538193 ACGCGCGAGGTAAAA GAG-GCGGTAAACGTGCAGTGGGCAG CATG CTGCCC-CTGACCGTGGCCCGCTCTC ACCCCTCCCGTATGC TERM 1990 2538281 - 2538306 + T 78 -14.1 -3.25223 | gap 1 GCCGCCTGCGGGGTT GCAGTCCTG-CC GCA GGACAGGACTGC TTCGTCATCTGACTC Daci_2308 2539654 - 2538467 - | integrase catalytic region TERM 1991 2539822 - 2539796 - R 74 -6.5 -4.3255 | gap 1 TGGCGAATCAAGAAA GGGCAGTCGGCC GCCG GGCCGAG-ACCC GGCCCCGAAAAGCAA TERM 1992 2539904 - 2539886 - R 100 -13.2 -4.86621 | opp_overlap 2539886 ACGCCCAACGAAAAA CAGCTCCT TGA AGGAGCTG TTTTTCATAAGAGAG TERM 1993 2539886 - 2539904 + r 100 -13.2 -4.72272 | opp_overlap 2539886 ACGCCCAACGAAAAA CAGCTCCT TGA AGGAGCTG TTTTTCATAAGAGAG Daci_2309 2540846 - 2539932 - | inositol-phosphate phosphatase TERM 1994 2540953 - 2540942 - H 85 -7.2 -4.8143 | overlap 2540943 GTAAGAACGGAAAAA GCCG CGTC CGGC GATGCGGGGCGGCGA TERM 1995 2541232 - 2541202 - g 72 -13.2 -3.18366 | overlap 2541200 2541198 2541203 2541205 TGCGCAAGGAAGAGA CCATCCAGCGGGCC AGC GGCGCGCTGGACGT GCTGGGCAATGCGCG TERM 1996 2541231 - 2541203 - g 73 -16.7 -2.50699 | overlap 2541202 2541200 2541198 2541205 GCGCAAGGAAGAGAC CATCCAGCGGGCC AGC GGCGCGCTGGACG TGCTGGGCAATGCGC TERM 1997 2541229 - 2541205 - g 70 -15.7 -2.78606 | overlap 2541203 2541202 2541200 2541198 GCAAGGAAGAGACCA TCCAGCGGGCC AGC GGCGCGCTGGA CGTGCTGGGCAATGC Daci_2310 2541063 - 2541890 + | tRNA/rRNA methyltransferase (SpoU) TERM 1998 2542466 - 2542444 - g 71 -9.8 -3.72324 | CATCGCCAGCAAGAA CGGCCACAGC GCC GATGTGACCG AGCACGACCTGGCAT Daci_2311 2541926 - 2542750 + | serine O-acetyltransferase Daci_2312 2542813 - 2543475 + | nitroreductase Daci_2313 2543930 - 2545873 + | thiamine biosynthesis protein ThiC TERM 1999 2545922 - 2545946 + F 95 -16.4 -3.90112 | AATGCGCGGCCCGGT GGCCGCCGTG GATGG CGCGGCGGCC TTTCCTTGGGAAAAC TERM 2000 2546158 - 2546174 + F 86 -13.7 -3.54424 | TTTCAGTACGCCCTG GCCCTCG TGG CGAGGGC TTTCGCCAACTGGCA Daci_2314 2546209 - 2547261 + | porin Daci_2315 2548670 - 2547285 - | RND efflux system outer membrane lipoprotein Daci_2316 2550618 - 2548672 - | ABC transporter related Daci_2317 2551802 - 2550621 - | RND family efflux transporter MFP subunit TERM 2001 2551801 - 2551839 + g 72 -13.2 -3.14132 | opp_overlap 2551797 TTGCGATTGAACTTC ATTCTTCCCCTGCCGC GCGGTCG GCCGCAGGGGAAGAAG TTCCTGCCCGGCGCC TERM 2002 2551973 - 2551935 - R 78 -10.8 -3.89822 | GATTCAGTGGAGAAA GCGAGGGGCGGGAGCGGC CGG GCTGCTCCCCCGGCTCAC CACCAGTTCAGCGCC Daci_2318 2553203 - 2551992 - | putative substrate-binding periplasmic (pbp) ABC transporter protein TERM 2003 2553253 - 2553231 - H 78 -7 -4.65895 | gap 1 CTTTGGATGGAAAAA GCCCGCTGC TGTTGC GCAG-GGGC CGGGGTGATTCCATG Daci_2319 2553526 - 2554212 + | XRE family transcriptional regulator Daci_2320 2554193 - 2554729 + | hypothetical protein TERM 2004 2554733 - 2554748 + T 70 -10.4 -3.42354 | opp_overlap 2554733 CTGAAAAAATAAAAA GCAGCC CGCA GGCTGC TTGTCGGTTGCCGTG TERM 2005 2554748 - 2554733 - T 100 -10.4 -5.75538 | opp_overlap 2554733 CTGAAAAAATAAAAA GCAGCC CGCA GGCTGC TTGTCGGTTGCCGTG Daci_2321 2555378 - 2554773 - | molybdenum cofactor synthesis domain-containing protein Daci_2322 2556048 - 2555371 - | hypothetical protein TERM 2006 2557199 - 2557181 - g 72 -13.8 -3.13522 | overlap 2557179 AGCTGGGCATGAAGA CCACCGGC AAT GCCGGCGG ATCGCACAACCTGGT Daci_2323 2556115 - 2557524 + | peptidase U62 modulator of DNA gyrase TERM 2007 2557549 - 2557566 + T 100 -11.3 -5.29782 | opp_overlap 2557549 CAGCTCAAGAATAAA GCGGCTT CTTG AAGCCGC TTTTTTGTGGATCTA TERM 2008 2557566 - 2557549 - T 95 -11.3 -4.45738 | opp_overlap 2557549 CAGCTCAAGAATAAA GCGGCTT CTTG AAGCCGC TTTTTTGTGGATCTA Daci_2324 2558418 - 2557579 - | 5-carboxymethyl-2-hydroxymuconate Delta-isomerase TERM 2009 2558789 - 2558805 + G 86 -6.5 -5.03715 | overlap 2558790 CGTATGAAGTTGGGA ACCATGC TGG GCATGGG TTTTTTCGCGGTGAT TERM 2010 2559087 - 2559132 + G 74 -10.9 -3.72695 | opp_overlap 2559046 2559116, overlap 2559086 2559088 AGCGCCTGCAGACCG AGCAGGCGCGCCGGCTCTTTG CCGA CATACGGCAGGCGCGCCAGCC TTTCGTGGAGACCAT Daci_2325 2558777 - 2560504 + | methyl-accepting chemotaxis sensory transducer Daci_2326 2563942 - 2560559 - | MscS mechanosensitive ion channel TERM 2011 2563417 - 2563445 + g 88 -13.1 -4.25283 | TGAGGTCGGGGGCTT CGCCGGGCTCG GCGGTCA CGGGCTCGGCG TTTTCCTGCGCGCGT TERM 2012 2563483 - 2563531 + g 71 -2.2 -4.65895 | opp_overlap 2563479, overlap 2563489 2563519 GGATGGACAGATCGA TCCGCCCCGGGCCGGGCTGG GACACCAGA TTGGCCTGGTCGGCCGCGGA TTTTTCGATGCCCAC Daci_2327 2564315 - 2566237 + | putative serine protein kinase, PrkA Daci_2328 2566284 - 2567552 + | hypothetical protein TERM 2013 2568264 - 2568225 - g 81 -7 -4.63218 | gap 1 GCCCCTCCAAGAAAA GCCTGGCGC-GCGAGCG GGCCGAG CGCGAGCAGCGCGAGGC CTATGCCCAGCAGCA Daci_2329 2567549 - 2569177 + | hypothetical protein Daci_2330 2569498 - 2569190 - | hypothetical protein TERM 2014 2569534 - 2569559 + r 90 -18.3 -3.16564 | gap 1, overlap 2569530 TTGACGATCATCGGG CG-CCGGGCCGC TTT GCGGCCCGGCCG TTCATCCACTCAGGC Daci_2331 2570901 - 2569561 - | ammonium transporter TERM 2015 2571087 - 2571115 + H 80 -15.3 -3.06492 | GGCAGCCGGGCGGGC GGTGCACCATCGC CGT GCGGTGGTGCAGC TCTTAAACTGCCTGC Daci_2332 2571131 - 2571931 + | Beta-lactamase Daci_2333 2572726 - 2571986 - | hypothetical protein TERM 2016 2572634 - 2572619 - G 77 -3.2 -4.72272 | GCTGCGGATGAAAAA GCCG GACTTGCG CGGC GTCATGTTGCGCTCG Daci_2334 2573641 - 2572796 - | PhzF family phenazine biosynthesis protein Daci_2335 2575465 - 2573801 - | hypothetical protein Daci_2336 2575642 - 2576610 + | LuxR family transcriptional regulator TERM 2017 2576680 - 2576661 - f 70 -3.6 -4.60041 | opp_overlap 2576663 2576673, overlap 2576670 2576673 AGCCATGGTCAAAAA TAGAATGA AGAT TCGTTCTA CGATCATTTCCCATG Daci_2337 2576693 - 2577292 + | TetR family transcriptional regulator TERM 2018 2577308 - 2577333 + F 82 -12.5 -3.65046 | overlap 2577309 GCGGCGCATTTTCCG GCGCTGGTGCC GTGC GGCGCCAGCGG TTGTTCCACTGAGGC TERM 2019 2577309 - 2577332 + F 79 -16 -2.78813 | overlap 2577308 CGGCGCATTTTCCGG CGCTGGTGCC GTGC GGCGCCAGCG GTTGTTCCACTGAGG Daci_2338 2577371 - 2578561 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 2020 2578549 - 2578571 + F 80 -11.2 -3.83154 | overlap 2578537 2578550 CTGGGCCGTGGCCCG CGCCCTGGTC TGA GGCCAGGGCC TTTGCATTGTCATTC TERM 2021 2578550 - 2578570 + F 79 -14.7 -2.89169 | overlap 2578537 2578549 TGGGCCGTGGCCCGC GCCCTGGTC TGA GGCCAGGGC CTTTGCATTGTCATT Daci_2339 2578613 - 2579041 + | hypothetical protein TERM 2022 2579101 - 2579121 + F 100 -16.9 -5.26119 | opp_overlap 2579096 2579097 GTGGTACAAACGCCG GGGGCGGAT GTG ATCCGCCCC TTTTCTTTTTGCCCA TERM 2023 2579362 - 2579378 + G 79 -2.1 -4.89233 | overlap 2579363 GCGCGCTGCGCTTCG TGGTGGC GTC GCTGCCC TTTTTGCTGTTCGTG TERM 2024 2579631 - 2579678 + G 77 -3.3 -4.72986 | opp_overlap 2579661, overlap 2579632 2579633 GGCGGGCTGGTTGCC ATCGG-CAGCGCCCATGGCGAGG GCGA CAACGCCATGA-CGCTGGCCGGC TTTTTGCTGACCGTG Daci_2340 2579226 - 2580137 + | hypothetical protein TERM 2025 2580277 - 2580309 + F 73 -9.2 -3.91897 | gap 1 GCGCGGCCAACGCCC GGCGCCGC-ACAG ACCTTGAA CTGTTGTGGCGCC TTTGTCCGTCCGGGC Daci_2341 2580382 - 2580708 + | putative iron uptake protein Daci_2342 2580705 - 2582357 + | putative iron-regulated membrane protein TERM 2026 2582348 - 2582371 + F 83 -3 -5.28826 | opp_overlap 2582313, overlap 2582349 CCCCACGCTGGAGCG CGCGTCATGA TGAT TCTTGGCGCC TTTTTTCTGGCCTTT Daci_2343 2582354 - 2582686 + | hypothetical protein Daci_2344 2582952 - 2584163 + | HAF family protein Daci_2345 2585365 - 2584559 - | 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase Daci_2346 2586883 - 2585396 - | succinic semialdehyde dehydrogenase Daci_2347 2588447 - 2586918 - | galactarate dehydratase Daci_2348 2589476 - 2588481 - | hypothetical protein Daci_2349 2589614 - 2590585 + | LysR family transcriptional regulator Daci_2350 2591338 - 2591745 + | hypothetical protein Daci_2351 2591774 - 2592217 + | hypothetical protein Daci_2352 2592714 - 2592394 - | ferredoxin TERM 2027 2592629 - 2592686 + g 77 -15.3 -3.22618 | overlap 2592630 2592630 2592678 GGCACGCCGTTGGAG ACGGCGGCGCGCATGAGGCTCTGGCCG TCCG TGGCCAGCACCACGTGCTCGCGGCCGC TGTGTTCTATGAAGG TERM 2028 2592630 - 2592685 + g 79 -18.8 -2.53249 | overlap 2592629 2592630 2592678 GCACGCCGTTGGAGA CGGCGGCGCGCATGAGGCTCTGGCCG TCCG TGGCCAGCACCACGTGCTCGCGGCCG CTGTGTTCTATGAAG Daci_2353 2593946 - 2592711 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase Daci_2354 2594995 - 2593943 - | hypothetical protein Daci_2355 2595908 - 2595564 - | hypothetical protein Daci_2356 2597424 - 2596027 - | glutathione-disulfide reductase Daci_2357 2599075 - 2597489 - | putative phosphatase or phosphodiesterase TERM 2029 2597628 - 2597640 + g 72 -6.9 -4.36914 | overlap 2597611 CTGGGCGCGGAGTTG GCGTG GCC CGCGC TTTTCTGGAAAACGA Daci_2358 2599207 - 2600451 + | hypothetical protein TERM 2030 2601129 - 2601091 - g 70 -8.8 -3.85698 | gap 2, opp_overlap 2601096 GCGGCGGCGGAGAAA GCGGCCGCATCAGGGCCG TGCGC CGGCCCCG--GCAGACGC AGCAGCCCTGAGGCC Daci_2359 2600484 - 2601140 + | hypothetical protein Daci_2360 2602232 - 2601144 - | tartrate dehydrogenase Daci_2361 2602297 - 2603277 + | LysR family transcriptional regulator TERM 2031 2603299 - 2603257 - T 78 -14.1 -3.21416 | gap 1, overlap 2603281 2603282 CACTTTCAGCAGGAA TG-GGCGGCAGCAGCGTCCT GAAA AGGGCGCGGCTGCCGCAGCA GGCTCAACCTGCCAG Daci_2362 2603749 - 2603303 - | GatB/YqeY domain-containing protein TERM 2032 2603462 - 2603510 + g 75 -6.7 -4.48987 | gap 2 GGTGGCCACTTCCTC GGCCGACAT-GC-GTGCGGGCAG GTAGG CGGTCAGCACGGCCATTTCGGCC TTTTCCTTGTCGGCC TERM 2033 2603841 - 2603802 - R 100 -15 -5.77571 | opp_overlap 2603809, overlap 2603809 ACCAAAAAACAAAAA CAAAAAACCCGCGCCTGG CGTC CCGAGCGCGGGTTTTGCG GCTGACGAGAGCCGG TERM 2034 2603834 - 2603809 - R 100 -13.9 -6.01725 | opp_overlap 2603809, overlap 2603802 AACAAAAACAAAAAA CCCGCGCCTGG CGTC CCGAGCGCGGG TTTTGCGGCTGACGA TERM 2035 2603809 - 2603834 + r 95 -13.9 -4.11216 | opp_overlap 2603802 2603809 AACAAAAACAAAAAA CCCGCGCCTGG CGTC CCGAGCGCGGG TTTTGCGGCTGACGA Daci_2363 2604084 - 2603872 - | 30S ribosomal protein S21 Daci_2364 2605470 - 2604250 - | hypothetical protein TERM 2036 2605509 - 2605520 + H 85 -7.2 -4.7373 | AGGGCGCCCATTCTC GCGC AATG GCGC TTTTTCCTAAAATCC TERM 2037 2605810 - 2605857 + G 72 -3.3 -4.60487 | gap 1, opp_overlap 2605823, overlap 2605813 ATCGGCATCAAGGTG GTGGCCGAGGACAT-CCGCACC CAGGT GGTGCGCCATGTCAACAGCTGC TTTTTCACCATGGTG TERM 2038 2605957 - 2605938 - g 72 -6.3 -4.3129 | overlap 2605940 CACCGACGAGGAAAA GCGCCGC TGGCAG GCCGCGC TGATCCGCAAGGACC Daci_2365 2605537 - 2606043 + | thioesterase superfamily protein Daci_2366 2608123 - 2606030 - | histidine kinase Daci_2367 2609071 - 2608148 - | extracellular solute-binding protein TERM 2039 2608836 - 2608894 + g 95 -14.5 -4.07687 | gap 2, opp_overlap 2608835 2608834 TCGGGCAGGGAAATG CCCACGGTCAGCGGCCCGCGCGCCTGCAG CCA CTGTCGGTGCGCGGG-CG-TGAGCCAGGG TTTTGCACCGGCCGT Daci_2368 2610033 - 2609221 - | uroporphyrin-III C-methyltransferase TERM 2040 2609773 - 2609785 + g 73 -7.7 -4.18018 | GCCCTCCTGCACGGC GCTCA GCA TGAGC TTTTCGATGAAGGCC Daci_2369 2611011 - 2610061 - | hypothetical protein Daci_2370 2613925 - 2611061 - | molybdopterin oxidoreductase TERM 2041 2611200 - 2611236 + g 74 -16.6 -2.79183 | gap 1 AGGCGCGCGTCGTCG CTGCCCTCGCAGCGCGC AAGC GCGC-CTGCGATGGCGG TCTCGTCCACATCGA TERM 2042 2613985 - 2614035 + r 81 -13.8 -3.27525 | opp_overlap 2613951, overlap 2613981 2613998 GCGCCGTCACGGGCC GCTGGCCGGGTCGGCCGGGCTGGC CTT GCTGGCTAGGCTGGCTAGGCTGGC TTGACTTTCGCCGAA TERM 2043 2613998 - 2614040 + r 70 -10.4 -3.53444 | overlap 2613981 2613985 CCGCTGGCCGGGTCG GCCGGGCTGGCCTTGCTGGC TAG GCTGGCTAGGCTGGCTTGAC TTTCGCCGAACATGA Daci_2371 2615256 - 2613976 - | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 2044 2614669 - 2614636 - G 72 -8.8 -3.96148 | gap 1, opp_overlap 2614663, overlap 2614637 GGCCTGCATCAGAAA GC-GCATGCCGCGCT CGGCC AGCGAGGCCTGCAGC ATGGCGGCTGCGGTC TERM 2045 2615289 - 2615334 + H 100 -30.5 -3.85817 | gap 1, opp_overlap 2615289 TCGGAAAACAAAAAA GGCGTCCCCCCGCTGCGCGGCC GAT GGCTGCGC-GCGGGGTGACGCC TTTGTCCCGGGCCGT TERM 2046 2615334 - 2615289 - H 100 -28.3 -5.79595 | gap 1, opp_overlap 2615289 TCGGAAAACAAAAAA GGCGTCCCCCCGCTGCGCGGCC GAT GGCTGCGC-GCGGGGTGACGCC TTTGTCCCGGGCCGT Daci_2372 2615672 - 2617411 + | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor TERM 2047 2617660 - 2617648 - g 71 -10.5 -3.70902 | CCGCTCAGACCGAAA GCGCC GTG GGCGC GGCCCTGCCCGTGCT Daci_2373 2617542 - 2618195 + | hypothetical protein TERM 2048 2618216 - 2618258 + F 100 -17.1 -4.57341 | gap 1, opp_overlap 2618214, overlap 2618219 CGCATTCACTGAATC G-GGCAGGGCCGGTGCGTGT GCAT ACACGCGCTGGCCCTGTTGC TTTTTGGGCGCAGTT TERM 2049 2618219 - 2618254 + F 100 -23.4 -3.80855 | opp_overlap 2618214, overlap 2618216 ATTCACTGAATCGGG CAGGGCCGGTGCGTGT GCAT ACACGCGCTGGCCCTG TTGCTTTTTGGGCGC Daci_2374 2618318 - 2618758 + | signal-transduction protein Daci_2375 2619625 - 2618819 - | nitrate ABC transporter, ATPase subunits C and D Daci_2376 2620563 - 2619622 - | nitrate ABC transporter, inner membrane subunit Daci_2377 2621884 - 2620604 - | twin-arginine translocation pathway signal TERM 2050 2621105 - 2621117 + g 75 -9.1 -4.12188 | TGCGAACTCGGCCGT GGTGC CCA GCACC TTTTCGGGGTGGTCC TERM 2051 2621988 - 2621947 - R 100 -18.2 -4.4078 | gap 3, opp_overlap 2621947 CTGCTCCAAGCAAAA CGGCGTC-CTCTCCAGCCGCG CTG CGCGG--GGAGAGTGACGCCG TTGTCCTGGGGCCTT TERM 2052 2621947 - 2621988 + r 95 -18.2 -3.40899 | gap 3, opp_overlap 2621947 CTGCTCCAAGCAAAA CGGCGTC-CTCTCCAGCCGCG CTG CGCGG--GGAGAGTGACGCCG TTGTCCTGGGGCCTT Daci_2378 2623459 - 2622194 - | response regulator receiver/ANTAR domain-containing protein TERM 2053 2622498 - 2622450 - G 74 -15.2 -3.09635 | gap 1 AGGTCCATCACGGAA CGGTCCAACTGC-GGCCCCAGCC GTGC GGCCGGGGGCTGCAGCTCGCCCG GCGCCAGCGTGGCCG TERM 2054 2622728 - 2622774 + g 82 -10.8 -4.15044 | gap 2, opp_overlap 2622699, overlap 2622752 GGCCGTGCAGCCCAC GCGGCGCAGCCGCTCGATCACG GCCAG CGTGG-CGT-CGGCCGCGCTGC TTTCTTGCCACAGGG TERM 2055 2623694 - 2623677 - H 70 -4 -4.63218 | opp_overlap 2623656, overlap 2623652 GGTTTTTCAAGAAAA GCCCCG TTCATC CGGCGC ACATGGCAACGCAGA TERM 2056 2624628 - 2624598 - g 86 -10.4 -4.56133 | TGGCAAGAAGGAAAA GCTCATGGCGGC GGCCGAT GCCGCCATGTAC ACGGCCAAGCGTGCC Daci_2379 2623792 - 2625513 + | diguanylate cyclase/phosphodiesterase TERM 2057 2625560 - 2625586 + F 76 -12.2 -3.36492 | CAGGGGCCATTGATG CCTGTGGCCGTG CGC CGCGCCCGCAGG TTCTACACTTCAGCC Daci_2380 2625604 - 2626644 + | glycoprotease family metalloendopeptidase TERM 2058 2626724 - 2626741 + T 86 -14.1 -3.53224 | opp_overlap 2626724 CTGCGCACAAAAAAA GCCCGGC ATAT GCCGGGC TTTGAAAACGGGCTG TERM 2059 2626741 - 2626724 - T 100 -14.1 -5.60993 | opp_overlap 2626724 CTGCGCACAAAAAAA GCCCGGC ATAT GCCGGGC TTTGAAAACGGGCTG Daci_2381 2627205 - 2626825 - | heat shock protein HSP20 TERM 2060 2628497 - 2628515 + G 72 -13.8 -3.12351 | CGTCATGGACAGGCA GGGCGCGC CCG GCGTGCCC TTCGATGTGGAGGGC Daci_2382 2627304 - 2628614 + | putative transporter signal peptide protein Daci_2383 2629820 - 2628642 - | lytic murein transglycosylase B TERM 2061 2629621 - 2629671 + g 100 -14 -4.7254 | gap 3 CCCTGCACGGTCCTG GC-CACGGCGGC-GCCGCCTGCCGC CGTG GCGGC-GGCAGCAGCGGTCGTGCGC TTTTTCGTGGAAGGT Daci_2384 2631997 - 2629817 - | transglutaminase domain-containing protein Daci_2385 2633028 - 2631994 - | hypothetical protein TERM 2062 2632233 - 2632261 + g 78 -6.6 -4.56597 | gap 1, opp_overlap 2632249, overlap 2632234 GGCTCACCAGCTGGT CGCTGCCCGTGGC AAAG GCC-TGGGCGGCC TTTTTCCAGACCACC Daci_2386 2633948 - 2633028 - | ATPase Daci_2387 2633991 - 2634944 + | histone deacetylase superfamily protein Daci_2388 2634962 - 2635771 + | enoyl-CoA hydratase/isomerase Daci_2389 2635864 - 2637153 + | MscS mechanosensitive ion channel TERM 2063 2637169 - 2637146 - f 84 -9.6 -4.57755 | AGGCAGCAGAGAAAA GCAGCTAGGA TTAT TCCTAGGTGC ATACCCTGAGTTCAG TERM 2064 2637210 - 2637235 + F 70 -3.2 -4.72201 | overlap 2637211 CGCAGGAAATCCCAA GGGTCGTGCT TAAAAT GGCACGATCG TTCTTTTTTGTGAGC Daci_2390 2637363 - 2638112 + | electron transfer flavoprotein alpha/beta-subunit Daci_2391 2638126 - 2639058 + | electron transfer flavoprotein alpha subunit TERM 2065 2639096 - 2639077 - f 85 -9.2 -4.66833 | opp_overlap 2639078, overlap 2639078 GCTGAAGCTGAAAAA TGAGGGGC ACAG GCCCCTCT TTTTCCGTCATGGAT TERM 2066 2639078 - 2639095 + F 100 -12.7 -4.68593 | opp_overlap 2639077 2639078 CTGAAGCTGAAAAAT GAGGGGC ACAG GCCCCTC TTTTTCCGTCATGGA TERM 2067 2639095 - 2639078 - f 76 -12.7 -3.39618 | opp_overlap 2639078, overlap 2639077 CTGAAGCTGAAAAAT GAGGGGC ACAG GCCCCTC TTTTTCCGTCATGGA TERM 2068 2640106 - 2640064 - g 70 -12.7 -3.30124 | GCCCAGTCCCTACAA GGTGACCATGCGCCTGAAC AAGGA GTTCAGGGACGCGGCCACC GCTGCAGGCAAGTCG Daci_2392 2639213 - 2640355 + | extracellular ligand-binding receptor TERM 2069 2641442 - 2641426 - g 71 -11.5 -3.53811 | GCGAGCGCGTGCAAA GCCGCCC CGT GGACGGC AGCGTGAAGGCCAGC Daci_2393 2640453 - 2642243 + | acyl-CoA dehydrogenase domain-containing protein TERM 2070 2642346 - 2642334 - g 75 -9.1 -4.15044 | overlap 2642302 CCGGCGCTGAAGAAA CTGGC CCT GCCAG TGATCGGCTCGCCGC Daci_2394 2642304 - 2643263 + | 2-nitropropane dioxygenase NPD TERM 2071 2643307 - 2643324 + F 100 -14.1 -4.93288 | TCCTACCCCGCCAGA CGGCGCC TTCG GGCGCCG TTTTCTTTGGGTATT TERM 2072 2643432 - 2643446 + F 74 -5.7 -4.46835 | TCCCCCTACGAGCGA CTTGC CTGGA GCAAG TTTGTTTAGAATTCT Daci_2395 2643499 - 2645196 + | cysteine ABC transporter permease/ATP-binding protein TERM 2073 2645347 - 2645379 + G 73 -7.6 -4.14472 | gap 1, overlap 2645350 2645378 TCATCACGGCCACGG CACTGGCCG-GGCTG CTGC CGGCCACGGCCATCG TTTTCGACGTCTTCA Daci_2396 2645193 - 2646878 + | cysteine ABC transporter permease/ATP-binding protein Daci_2397 2646921 - 2648507 + | cytochrome bd ubiquinol oxidase subunit I Daci_2398 2648526 - 2649677 + | cytochrome d ubiquinol oxidase, subunit II Daci_2399 2649727 - 2649852 + | cyd operon protein YbgT TERM 2074 2650027 - 2650008 - T 85 -12.2 -3.81488 | opp_overlap 2650008, overlap 2649991 TTGCTGTAAACACAA TGAGCTCC CTGG GGAGCTCA TTTTTGTACGCAGGC TERM 2075 2650008 - 2650027 + T 100 -12.2 -4.82901 | opp_overlap 2649991 2650008 TTGCTGTAAACACAA TGAGCTCC CTGG GGAGCTCA TTTTTGTACGCAGGC Daci_2400 2650648 - 2650052 - | ArsR family transcriptional regulator Daci_2401 2650810 - 2651967 + | acyltransferase 3 TERM 2076 2652022 - 2651991 - T 91 -13.8 -3.89346 | opp_overlap 2651998, overlap 2651998 GCCTCAGTCCACAAA CAACAAAGGCAGCC GGTT GGCTGCCTTTTTCG CTTCACGCCGGTCGG TERM 2077 2651998 - 2652015 + T 100 -12.7 -4.74103 | opp_overlap 2651991 2651998 TCCACAAACAACAAA GGCAGCC GGTT GGCTGCC TTTTTCGCTTCACGC TERM 2078 2652015 - 2651998 - T 100 -12.7 -4.63048 | opp_overlap 2651998, overlap 2651991 TCCACAAACAACAAA GGCAGCC GGTT GGCTGCC TTTTTCGCTTCACGC Daci_2402 2652445 - 2652041 - | GreA/GreB family elongation factor TERM 2079 2652538 - 2652514 - H 100 -15.7 -4.51196 | opp_overlap 2652516, overlap 2652505 CCCAAACGGACAAAA GCCCGGGCAAC GCG GTTGTCCGGGC CAAGGCATCTTCAGA TERM 2080 2652578 - 2652564 - H 100 -10 -4.94487 | TCAGAAAAGAGAAAA GCACCA AGT TGGTGC GATAGGCCCATTGTG TERM 2081 2652599 - 2652630 + H 84 -17.4 -2.79831 | gap 1, opp_overlap 2652622 GCCCATTGTGCAGGC CCGTGTGGGTTCTGC CAA GC-GAACCCGCACGG TGTGGTGCGGATTGG Daci_2403 2652713 - 2653882 + | radical SAM domain-containing protein Daci_2404 2654795 - 2653920 - | LysR family transcriptional regulator TERM 2082 2655019 - 2655033 + G 70 -3.5 -4.39166 | CGCAGCAGCGACGGC GTCGA AGGCA TCGGC TTTTGCTATGTCGGC Daci_2405 2654893 - 2656017 + | mandelate racemase/muconate lactonizing protein Daci_2406 2656053 - 2657027 + | hypothetical protein Daci_2407 2657910 - 2657059 - | MarR family transcriptional regulator Daci_2408 2657942 - 2658979 + | phosphonate ABC transporter, periplasmic phosphonate-binding protein Daci_2410 2660735 - 2659722 - | hypothetical protein Daci_2409 2658976 - 2659854 + | phosphonate ABC transporter, ATPase subunit TERM 2083 2660325 - 2660357 + gF 77 -11.9 -3.61398 | CCCGGCGTGCTGGCC CTGGCCCTGCATGGC ATG GGCATGCTGGGCAAG TTCTTCGCCGAGAGC TERM 2084 2661472 - 2661502 + G 79 -14.7 -3.28712 | gap 1 GCTGCGAAGCCGCAT GGCCGAGGCCGCCC TGAT GGCCGGCCT-GGCC TTCTCCAACACCCGC Daci_2411 2660747 - 2661835 + | phosphonate metabolism-associated iron-containing alcohol dehydrogenase Daci_2412 2661890 - 2662735 + | phosphonoacetaldehyde hydrolase Daci_2413 2663735 - 2662863 - | S-formylglutathione hydrolase TERM 2085 2663508 - 2663529 + g 72 -13.7 -3.21416 | gap 1, overlap 2663501 2663526 AATGCCCAGCTCGGC GGCCAGGCGC TGG GCGCC-GGCC TTGGTCATGAAGGTC TERM 2086 2663791 - 2663757 - R 95 -3.5 -5.61881 | CCTCAAAAAGAAAAA TGCTACGGGCACC TTGGCAAGC GGTGCGTGCAGCA TTCAAAGATGGGAGT TERM 2087 2663909 - 2663874 - R 74 -12.4 -3.13522 | gap 1, overlap 2663840 2663872 AGGCGCCGAGCAAGA GCCGCCTCGCGGCGGGG GCG CCCAGCCGAG-GGCGTC GTCCCCCTCCCTCGC Daci_2414 2665093 - 2663984 - | S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase TERM 2088 2664749 - 2664722 - G 85 -11.2 -4.25104 | GCCGTTGTACGAAAA GCGCGTGGTGCC GTCG GGCATCACGCCC TTGCCCTGGGTGGCG Daci_2415 2665332 - 2666369 + | AraC family transcriptional regulator Daci_2416 2667697 - 2666381 - | DEAD/DEAH box helicase domain-containing protein Daci_2417 2669258 - 2667819 - | RND efflux system outer membrane lipoprotein TERM 2089 2669229 - 2669178 - G 72 -15 -2.87132 | gap 1, overlap 2669207 GGCCGGCTTTACATA GGCCGGCCCGCTC-GCGCAGCCG GCCAGAA CGGCGGCGCAGAGCGCGGCGGTC ACGGTGCGGGGAAAA Daci_2418 2672554 - 2669255 - | acriflavin resistance protein TERM 2090 2670941 - 2670899 - G 100 -18.5 -3.90744 | gap 1 CTGCTCGGGAAAGAA GGTGCCCGGCA-CATGGCGC AGCA GCGCCACATTGCCGGCCACC AGCAGCACCAGCACG Daci_2419 2675712 - 2672551 - | acriflavin resistance protein Daci_2420 2677029 - 2675764 - | RND family efflux transporter MFP subunit Daci_2421 2677379 - 2677083 - | hypothetical protein TERM 2091 2677526 - 2677547 + r 100 -15.9 -4.18018 | opp_overlap 2677526 TCGCAAATGAAAAAA GCCCCATGC AAAG GCATGGGGC TTTTGGGTGCCGGGC TERM 2092 2677547 - 2677526 - R 100 -15.9 -5.37593 | opp_overlap 2677526 TCGCAAATGAAAAAA GCCCCATGC AAAG GCATGGGGC TTTTGGGTGCCGGGC Daci_2422 2678894 - 2677584 - | type II citrate synthase Daci_2423 2679219 - 2678920 - | hypothetical protein Daci_2424 2679923 - 2679219 - | succinate dehydrogenase and fumarate reductase iron-sulfur protein Daci_2425 2681756 - 2679951 - | succinate dehydrogenase, flavoprotein subunit Daci_2426 2682155 - 2681790 - | succinate dehydrogenase, hydrophobic membrane anchor protein TERM 2093 2682150 - 2682160 + g 81 -3.2 -4.94972 | GGAGCCGTAATTCAC GGAC ATG GTTC TTTTTCCTTATCGTG Daci_2427 2682614 - 2682192 - | succinate dehydrogenase, cytochrome b556 subunit TERM 2094 2682579 - 2682594 + g 77 -3.2 -4.7629 | overlap 2682590 GAAGAAGTTGATGTT GCGG AACTCTGG CCGC TTTTTGGCTTGCTCA TERM 2095 2682694 - 2682674 - R 75 -7.7 -4.18018 | GGCGGCGATGCAAAA TTCTATTGC AAT GCAATAAAA ACAGCTTTGCTGGGA TERM 2096 2682706 - 2682696 - R 89 -6.8 -5.13741 | GCAATGCAATAAAAA CAGC TTT GCTG GGAATTGCGTATTTT Daci_2428 2683537 - 2682749 - | GntR family transcriptional regulator Daci_2429 2683756 - 2684742 + | malate dehydrogenase TERM 2097 2684988 - 2684945 - g 71 -11.9 -3.59202 | gap 3, overlap 2684946 CACCGGCATAGACAA CTCCCAGGC-GATGCTGGCCAC CGC GCG-CCAGCATCTGCCTGAG-G CCCGCTTCACGCTGG TERM 2098 2685504 - 2685473 - g 88 -11.4 -4.43681 | opp_overlap 2685494 2685497, overlap 2685467 2685475 CACCGAATACGAAAA CCGCGTGGACGCCG CCTA CGGCGTGCGCGCCG ACGGCCGGCGCCTGC Daci_2430 2684757 - 2685563 + | trans-aconitate 2-methyltransferase TERM 2099 2686525 - 2686555 + G 78 -13.3 -3.65351 | gap 1, opp_overlap 2686521 TGCCCACCAGACCGG CCAGGCGCTGCCCC CACA GGTGCAGC-CCTGG TTTGCATCAGAATCA Daci_2431 2685560 - 2686579 + | HpcH/HpaI aldolase TERM 2100 2686768 - 2686821 + G 77 -15.1 -3.14132 | gap 1, opp_overlap 2686765 2686751 2686768 CCGCCGCCAAGACCA CGGCCAAGGCCGCTGCCGGCGCCGCC GCT GTCGGCGGTG-CAGCCGCCGTGGCGG TTGCTGCCCAGCAGC TERM 2101 2687106 - 2687084 - g 78 -13.4 -3.54029 | overlap 2687085 GCTCATGAACCAGAA GGTCGGCCAG CGC CTGGCCGACG AATGCATGAGCCCCG TERM 2102 2687105 - 2687085 - g 74 -16.9 -2.72096 | overlap 2687084 CTCATGAACCAGAAG GTCGGCCAG CGC CTGGCCGAC GAATGCATGAGCCCC Daci_2432 2686611 - 2687201 + | hypothetical protein TERM 2103 2689054 - 2689015 - g 78 -13.6 -3.55444 | GCCGCATCCTGGAAA TCGAAGGTCTGCCCGACC TGAA GGTGGAACAGGCCTTCGA GCTGTCCGACGCCTC Daci_2433 2687265 - 2689856 + | bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase TERM 2104 2689879 - 2689907 + F 100 -14 -4.15006 | gap 1, opp_overlap 2689886, overlap 2689882 2689886 CTGATCCGGCTCCAT GAGCAAAGCCCGC TTCG GCGGGCTTTG-TC TTTTGCGATGGGTCT TERM 2105 2689882 - 2689905 + F 100 -16.8 -3.67188 | opp_overlap 2689886, overlap 2689879 2689886 ATCCGGCTCCATGAG CAAAGCCCGC TTCG GCGGGCTTTG TCTTTTGCGATGGGT TERM 2106 2689901 - 2689886 - f 80 -11.8 -3.78775 | opp_overlap 2689886 2689882 2689879 GGCTCCATGAGCAAA GCCCGC TTCG GCGGGC TTTGTCTTTTGCGAT TERM 2107 2689886 - 2689901 + F 95 -11.8 -4.45771 | opp_overlap 2689886, overlap 2689882 2689879 GGCTCCATGAGCAAA GCCCGC TTCG GCGGGC TTTGTCTTTTGCGAT Daci_2434 2690004 - 2690255 + | plasmid stabilization protein TERM 2108 2690488 - 2690503 + G 100 -11.8 -4.76041 | GCTGCGCGAAGATGC GCCCGC CTTG GCGGGC TTTTTGGTGACTGTG Daci_2435 2690252 - 2690542 + | plasmid stabilization system protein Daci_2436 2690760 - 2690557 - | hypothetical protein Daci_2437 2691281 - 2690757 - | hypothetical protein Daci_2438 2692245 - 2691325 - | XRE family transcriptional regulator Daci_2439 2692287 - 2692712 + | hypothetical protein TERM 2109 2692725 - 2692742 + T 77 -3.3 -5.00616 | overlap 2692727 2692727 TGATGGGACTGTTTC TGCCCCT GCCG GGGGGTG TTTTTTCGAGGCCGG Daci_2440 2693326 - 2693054 - | hypothetical protein TERM 2110 2694786 - 2694799 + G 71 -3.1 -4.60041 | gap 1, opp_overlap 2694771 TGGCGCCCGAGTACG GCGCCA CCA TGG-GC TTTTTCCCCGTCGAT TERM 2111 2696141 - 2696103 - g 81 -12.4 -3.95584 | gap 1 GCTCCATCAAGGAAA GCTCGCCCGCAGGCCAG TGGCTG CTGGCCCACGG-CGTGC AAAAGGCCGACTTCA Daci_2441 2693864 - 2696749 + | aconitate hydratase Daci_2442 2697791 - 2696892 - | LysR family transcriptional regulator TERM 2112 2697276 - 2697218 - G 74 -16.6 -2.80074 | overlap 2697215 GGCGCGAGAACAGCA CCATGCGCTCACCCGCCAGCTGGCGC ACCTGCA GCGTGCGCTGGCCGGCCAGCGCATGG CCTGCGGGCAGGCAG Daci_2443 2697928 - 2699631 + | acyl-CoA dehydrogenase domain-containing protein TERM 2113 2699987 - 2699937 - g 74 -11.7 -3.7941 | gap 1, opp_overlap 2699938 GATCGTGGAGAACAA GGCC-GGTGCGGGCGGCAACATCG GCGC CGACTTCGTGGCCCGCGCCAGGCC CGACGGCTACACCAT Daci_2444 2699707 - 2700711 + | hypothetical protein Daci_2445 2700869 - 2701984 + | L-carnitine dehydratase/bile acid-inducible protein F Daci_2446 2703647 - 2701992 - | hypothetical protein TERM 2114 2702218 - 2702169 - G 71 -11.4 -3.59979 | gap 3, overlap 2702170 CGGGGTGAGTTCAAA GCGCTGCTCGCCGG-GC-GCCAGCG GCT CGCTGGCCGTGCCGGTGCGCAGC-C ACTGCACCACGCCCT Daci_2447 2704699 - 2703644 - | hypothetical protein TERM 2115 2704319 - 2704283 - G 71 -2.8 -4.56597 | gap 1, overlap 2704291 GGTCTGCCCGAAAAA GGCGAACAGCGCACCCG TGCC CAGGAGCGCCAG-CACC GACAGCGGCACGCGC TERM 2116 2704393 - 2704379 - G 79 -11.4 -4.00038 | CATCACGAGCACAAA GCCCTG CAG CAGGGC AAAGCGCTGCATGCG Daci_2448 2704875 - 2705408 + | hypothetical protein TERM 2117 2705901 - 2705933 + G 76 -2.5 -4.72272 | overlap 2705902 2705903 GCTGGCGCTGTTCCT GTTCACCACGGTGGC CGG GCGGCTGTGGTGCGG TTTTTCCTGCCCGCA Daci_2449 2705545 - 2707014 + | cytochrome c oxidase accessory protein CcoG TERM 2118 2707063 - 2707099 + F 76 -8.7 -4.07568 | gap 1, overlap 2707064 GCGCAGTTGTTGTGC ACGATGCCTGGTCCGC TGCAGC GCGGGCT-GGCATCGG TTTTGAGGCCCCGGG TERM 2119 2707064 - 2707098 + F 72 -12.2 -3.04398 | gap 1, overlap 2707063 CGCAGTTGTTGTGCA CGATGCCTGGTCCGC TGCAGC GCGGGCT-GGCATCG GTTTTGAGGCCCCGG TERM 2120 2707106 - 2707129 + F 100 -14.6 -5.55664 | gap 1 TGGCATCGGTTTTGA GGCCCCGG-GA TTT TCTCCGGGGCC TTTTTTTCATCCTGC TERM 2121 2709101 - 2709056 - g 72 -3.2 -4.56597 | gap 2, overlap 2709058 2709059 GGCGTGCTGGAAAAA TACGCGCTCACCGTGCGCCCGG CCCA CCAGG-GCGCGGTCA-CGCATT CGGGCCAGGTGGTCT Daci_2450 2707160 - 2709136 + | dihydroxy-acid dehydratase Daci_2451 2709217 - 2710209 + | hypothetical protein TERM 2122 2710244 - 2710221 - T 83 -4.4 -5.093 | gap 1, overlap 2710222 2710239 CTGAAAAGAACAAAA CGGGCC-GAGC GAA GCGAAGGCCCG CCCCATGCCCACTCC Daci_2452 2711535 - 2710348 - | integrase catalytic region TERM 2123 2711728 - 2711717 - R 72 -2.2 -4.82901 | overlap 2711720 CCGGGCTCAGAAAAA TACC ACCC GGCA GGGTCAAAAACAGAC Daci_2453 2713923 - 2711761 - | TonB-dependent siderophore receptor TERM 2124 2712331 - 2712355 + g 82 -15.7 -3.4252 | opp_overlap 2712327 GATGTTGAACAGCGT CAGCTCGGCGT TCA GCGCCGGGCTG TTGTAGTGCGTGCCC TERM 2125 2714144 - 2714184 + r 71 -5.4 -4.4261 | gap 2, overlap 2714160 CCCGGGCGCTACAGC GCAGC-AGGT-GCTGCCAGC GCA GCGGGCGCTTACCTTGCTGC TTTTGCTGTTGGACG Daci_2454 2715618 - 2714173 - | transcriptional regulator TERM 2126 2714505 - 2714537 + g 71 -11.2 -3.58343 | gap 1 GGGCCAGGCTCTGGC GCAGGCGGCGCAGGT GGCG GTCGGCGCCGCC-GC TTTCCAGGTAGTCGG Daci_2455 2716520 - 2715651 - | hypothetical protein TERM 2127 2716319 - 2716353 + g 72 -8.5 -4.09685 | CCATGTTCTTGAACT GCGTGGCCTGCAC GGTGTTGAA GGGCAGGCCGTGC TTTTGGCAGATGGCG TERM 2128 2716562 - 2716546 - R 78 -10.1 -3.98716 | overlap 2716550 2716551 AAATGAGGAATGAAA GGAACGG CGG CCGCTCC GGGCCATTGCAGCAA TERM 2129 2716596 - 2716550 - R 100 -23 -3.62539 | overlap 2716546 2716551 GAGGAATGAAAGGAA CGGCGGCCGCTCCGGGCCATTG CAG CAATGGCCCTGGACAGCCGCCA GGAAAAAATCACGGG TERM 2130 2716595 - 2716551 - R 100 -24.3 -2.768 | overlap 2716546 2716550 AGGAATGAAAGGAAC GGCGGCCGCTCCGGGCCATTG CAG CAATGGCCCTGGACAGCCGCC AGGAAAAAATCACGG Daci_2456 2718031 - 2716643 - | peptidase U32 Daci_2457 2718964 - 2718053 - | LysR family transcriptional regulator TERM 2131 2718981 - 2719001 + H 74 -11.1 -3.52918 | opp_overlap 2718984, overlap 2718977 GACTGTGGTGCTGAA GGATCAGGC CAT GCCTGAGCC TTGGTTTGAAGATTC TERM 2132 2719776 - 2719814 + G 100 -18.3 -4.08216 | gap 2 CCCTGGCCGGCATGG CCTGGGGCGA--GCGGCTG CGC CAGTCGCTGTCGCCCCAGG TTTTCAAGCGCGTGC Daci_2458 2719109 - 2719879 + | hypothetical protein Daci_2459 2720489 - 2719890 - | peptide chain release factor H Daci_2460 2721634 - 2720480 - | release factor H-coupled RctB family protein TERM 2133 2721115 - 2721139 + g 81 -12.2 -3.83026 | gap 1 CCAGCCCGCGCGAGC CGCTGTGCACC ATGA GGTGCAC-GCG TTTCCTGTCGAGCGC TERM 2134 2721526 - 2721543 + g 72 -8.3 -3.98291 | CGGCTGCGCGCATGC CGGCCAG GTTG CGGGCCG TTGTTTGAAGTTGTT TERM 2135 2721981 - 2722006 + r 100 -13.2 -4.72272 | opp_overlap 2721981 AGCAAGATGGAAAAA GCCCCGCAGG CAGGTA CCGGCGGGGC TTTTTGATGAAGGGC TERM 2136 2722006 - 2721981 - R 100 -13.9 -4.75308 | opp_overlap 2721981 AGCAAGATGGAAAAA GCCCCGCAGGC AGGT ACCGGCGGGGC TTTTTGATGAAGGGC Daci_2461 2723174 - 2722032 - | protein TolA TERM 2137 2722497 - 2722509 + g 75 -6.2 -4.48987 | CTTCTTCTCGGCTTC GGCC TTGGC GGCC TTTTCCTTGTCGGCC TERM 2138 2722722 - 2722737 + g 79 -7.5 -4.48987 | CTCGGCCTTGTCCTT GGCCG CCTTGT CGGCC TTTTCCTTGTCCAGG Daci_2462 2723624 - 2723199 - | biopolymer transport protein ExbD/TolR Daci_2463 2724359 - 2723655 - | protein TolQ Daci_2464 2724772 - 2724356 - | tol-pal system-associated acyl-CoA thioesterase TERM 2139 2724799 - 2724827 + r 83 -16 -3.09803 | CTCAGGCCAGCAGGC GCTGCAGGCGGC GCACG GCCTCCTGCAGC TGTTCCATGGAGTTG Daci_2465 2725969 - 2724785 - | aminotransferase TERM 2140 2726019 - 2725991 - R 76 -13.7 -3.05294 | TGAAATCCTGGAAGA GGCGCCCGCGCCC GGC AGGCGCGGGCGGG CCGTGGATGGCCGGA Daci_2466 2726712 - 2726074 - | NusB antitermination factor Daci_2467 2727179 - 2726709 - | riboflavin synthase subunit beta TERM 2141 2726759 - 2726775 + g 75 -9.3 -4.2349 | overlap 2726751 TCTCCACGGCGACCC GGGCCGC GTC GCGTCCC TTTTCGGTCTGGCGC TERM 2142 2727152 - 2727162 + g 82 -8.2 -4.4715 | overlap 2727105 CGCCGTCGAGGTTCT GGGC CTG GCCC TTTTCTGCGTTCAAC Daci_2468 2728352 - 2727183 - | 3,4-dihydroxy-2-butanone 4-phosphate synthase Daci_2469 2728870 - 2728517 - | ferredoxin Daci_2470 2729468 - 2730376 + | short-chain dehydrogenase/reductase SDR TERM 2143 2730585 - 2730603 + F 76 -10.2 -3.70902 | GCGTCCGGGTCGGGT CCGCCGGG AAT CCTGGTGG TTTCCGTGTGGGCCG TERM 2144 2731100 - 2731134 + G 70 -9.2 -3.93695 | opp_overlap 2731102, overlap 2731102 TCGGGCATCCACTAC AACTGGTCGCTGCCCG GCG TGACCAGCGACCAGTA TTTCTCGCTGATCCG TERM 2145 2731102 - 2731132 + G 71 -11.8 -3.55824 | opp_overlap 2731102, overlap 2731100 GGGCATCCACTACAA CTGGTCGCTGCCCG GCG TGACCAGCGACCAG TATTTCTCGCTGATC TERM 2146 2731132 - 2731102 - g 76 -13.3 -3.4252 | opp_overlap 2731100 2731102 GGGCATCCACTACAA CTGGTCGCTGCCC GGCGT GACCAGCGACCAG TATTTCTCGCTGATC Daci_2471 2730647 - 2732176 + | glutamate--cysteine ligase Daci_2472 2732396 - 2732184 - | hypothetical protein Daci_2473 2732641 - 2732399 - | hypothetical protein Daci_2474 2732809 - 2733762 + | GTP-binding protein HSR1-related Daci_2475 2733899 - 2736190 + | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) Daci_2476 2737418 - 2736222 - | amidohydrolase Daci_2478 2739554 - 2738595 - | pseudouridine synthase Daci_2477 2737633 - 2738655 + | phosphoesterase, DHHA1 TERM 2147 2740255 - 2740279 + G 72 -9.1 -3.99324 | GCCCGAGCTGTCTGC GCGCGAGCGCC ACC GGCGCGAGTGC TTTGTGGTGCTGGAG Daci_2479 2739659 - 2740657 + | diaminopimelate dehydrogenase Daci_2480 2742032 - 2740659 - | major facilitator transporter Daci_2481 2742123 - 2742470 + | hypothetical protein Daci_2482 2742836 - 2744284 + | phospholipase D/transphosphatidylase TERM 2148 2744318 - 2744300 - T 100 -11.7 -5.27335 | opp_overlap 2744316 GCCTGCAAAGAAAAA GGCCTGC GCAAT GCAGGCC TTCAGGGCTGTTGGG Daci_2483 2745188 - 2744346 - | protein of unknown function DUF306 Meta and HslJ Daci_2484 2745521 - 2746099 + | putative lipoprotein Daci_2485 2747072 - 2746122 - | peptidase M23B Daci_2486 2749366 - 2747099 - | hypothetical protein Daci_2487 2749857 - 2749528 - | hypothetical protein Daci_2488 2750653 - 2749937 - | methyltransferase type 12 TERM 2149 2750705 - 2750737 + r 80 -15 -3.01712 | gap 2, opp_overlap 2750725 AGCGCCGATGTGCGA TGGCCCACC--CCTGC AAA GCAGGATGGTGGGCCA TCTTCGGGGAGGAGC Daci_2489 2752669 - 2750783 - | glutaminyl-tRNA synthetase Daci_2490 2752822 - 2753187 + | hypothetical protein TERM 2150 2753218 - 2753235 + F 100 -14.1 -4.68593 | GCTGAACCGACTCTT GCCGCCC CTTG GGGCGGC TTTTTCCGTGGTGCC Daci_2491 2753318 - 2753761 + | 3-dehydroquinate dehydratase Daci_2492 2753755 - 2754642 + | alpha/beta hydrolase fold Daci_2493 2754647 - 2755045 + | class I peptide chain release factor Daci_2494 2755128 - 2756066 + | extradiol ring-cleavage dioxygenase class III protein subunit B Daci_2495 2756162 - 2756827 + | phospholipase/carboxylesterase Daci_2496 2757019 - 2757939 + | hypothetical protein Daci_2497 2758423 - 2757953 - | AsnC family transcriptional regulator TERM 2151 2760682 - 2760723 + G 85 -15.9 -3.57144 | gap 1 GACCTGCCACAGGGC GCGGCCGAAGGCGT-GCTGC GCG GCGGCTATGTGTTCGGCCGC TTTGGCGATGCGGGC Daci_2498 2758450 - 2761158 + | 2-oxoacid dehydrogenase subunit E1 TERM 2152 2761233 - 2761215 - f 70 -13.1 -2.91695 | opp_overlap 2761215 2761225, overlap 2761212 CCGACGGTGAAATCA GCGGCCC CTTGC GGGCCGC TTTTTCGTGCGCACC TERM 2153 2761215 - 2761233 + F 100 -13.1 -4.72272 | opp_overlap 2761212 2761215, overlap 2761225 CCGACGGTGAAATCA GCGGCCC CTTGC GGGCCGC TTTTTCGTGCGCACC TERM 2154 2761238 - 2761266 + F 81 -8 -4.68424 | overlap 2761225 2761239 2761260 TTGCGGGCCGCTTTT TCGTGCGCACCC GAGAA GGCTGCGCGCGC TTTTTCCCTGCATTG TERM 2155 2761239 - 2761265 + F 72 -11.5 -3.40331 | overlap 2761225 2761238 2761260 TGCGGGCCGCTTTTT CGTGCGCACCC GAGAA GGCTGCGCGCG CTTTTTCCCTGCATT Daci_2499 2761494 - 2763674 + | gluconate 2-dehydrogenase (acceptor) TERM 2156 2763726 - 2763755 + T 100 -18.6 -5.40072 | CGGCGGGAGCCTGAA GGCGGGGCAGGG AGCGAG TCCTGCCCCGCC TTTTTTTCGAGGGCA Daci_2500 2764672 - 2763917 - | hypothetical protein TERM 2157 2764673 - 2764661 - G 77 -3.4 -4.77036 | opp_overlap 2764669 CGCGATGATGAAAAA CATG CCATC CATG GTCTGCCTGGTCCTT Daci_2501 2764799 - 2765767 + | LysR family transcriptional regulator Daci_2502 2766627 - 2765758 - | hypothetical protein Daci_2503 2767472 - 2766624 - | UDP-2,3-diacylglucosamine hydrolase TERM 2158 2767619 - 2767584 - R 81 -13.8 -3.35996 | overlap 2767586 2767587 2767604 CATGCGCATGGACAA CAGGGCGGCCGGACCC GAAA GGGCACGGCCGCCGAG TGTGCGCAAGCGCCT TERM 2159 2767617 - 2767586 - R 82 -15 -3.24924 | overlap 2767584 2767587 2767604 TGCGCATGGACAACA GGGCGGCCGGACCC GAAA GGGCACGGCCGCCG AGTGTGCGCAAGCGC TERM 2160 2767616 - 2767587 - R 85 -18.5 -2.5474 | overlap 2767586 2767584 2767604 GCGCATGGACAACAG GGCGGCCGGACCC GAAA GGGCACGGCCGCC GAGTGTGCGCAAGCG Daci_2504 2768143 - 2767637 - | peptidyl-prolyl cis-trans isomerase cyclophilin type TERM 2161 2767928 - 2767943 + g 72 -4.6 -4.45544 | overlap 2767925 GGCCTCGTTCTCGAT GGGGGC GTCC GTCTCC TTTTGCTTCATGCCG Daci_2505 2768869 - 2768201 - | peptidyl-prolyl cis-trans isomerase cyclophilin type Daci_2506 2769591 - 2768932 - | TPR repeat-containing protein Daci_2507 2769670 - 2771055 + | cysteinyl-tRNA synthetase Daci_2508 2771105 - 2771914 + | HhH-GPD family protein Daci_2509 2771998 - 2772975 + | acetyl-CoA carboxylase, carboxyl transferase, alpha subunit TERM 2162 2773000 - 2773028 + F 95 -11.7 -4.57569 | opp_overlap 2773005, overlap 2773005 CCACGCTCTGGCACA CTGAACGGCTCCC CCT GGGAGCCGTTTGC TTTTTGCGCCAATCC TERM 2163 2773005 - 2773023 + F 100 -16 -4.32046 | opp_overlap 2773005, overlap 2773000 CTCTGGCACACTGAA CGGCTCCC CCT GGGAGCCG TTTGCTTTTTGCGCC TERM 2164 2773023 - 2773005 - f 83 -16 -3.12351 | opp_overlap 2773000 2773005 CTCTGGCACACTGAA CGGCTCCC CCT GGGAGCCG TTTGCTTTTTGCGCC TERM 2165 2773161 - 2773131 - f 74 -11 -3.53811 | opp_overlap 2773132, overlap 2773132 GGCAGCCGCTCCAAA TGCCGCACCAGGTG CTG CACCGGGTGCCGCT TTGGACGCGGCCATC TERM 2166 2773160 - 2773132 - f 77 -14.5 -2.72144 | opp_overlap 2773132, overlap 2773131 GCAGCCGCTCCAAAT GCCGCACCAGGTG CTG CACCGGGTGCCGC TTTGGACGCGGCCAT TERM 2167 2773132 - 2773160 + F 90 -14.5 -3.53091 | opp_overlap 2773132 2773131 GCAGCCGCTCCAAAT GCCGCACCAGGTG CTG CACCGGGTGCCGC TTTGGACGCGGCCAT TERM 2168 2774050 - 2774078 + G 76 -7.4 -4.37092 | gap 1, overlap 2774052 TGCCGTACGCGAGGC CACCGCATCCATC TCAA GATGGG-GCGGGG TTTTGTGCGGCGCCT Daci_2510 2773162 - 2774121 + | tRNA(Ile)-lysidine synthetase Daci_2511 2774300 - 2775565 + | aspartate kinase TERM 2169 2775613 - 2775596 - f 80 -3.5 -5.07107 | gap 1, opp_overlap 2775599, overlap 2775597 2775599 GAAACCGGCAAAAAA GCACGTTA CAA TAACGT-C ATTCCGGAAACGTGA TERM 2170 2775741 - 2775724 - f 100 -12.7 -5.39721 | opp_overlap 2775724 CCAGGATAGAAAAAA GCCACCC GCAA GGGTGGC TTTTTTTATGAGAGG TERM 2171 2775724 - 2775741 + F 100 -12.7 -5.60993 | opp_overlap 2775724 CCAGGATAGAAAAAA GCCACCC GCAA GGGTGGC TTTTTTTATGAGAGG TERM 2172 2776091 - 2776122 + F 84 -6 -4.92314 | gap 1, opp_overlap 2776097 2776099 2776102, overlap 2776087 2776093 2776094 AGCCAAAAACGCTCA TGAGAATAGAAGTGA AGT TCACTTCAATTC-CG TTTTTATGAGTTAGT TERM 2173 2776429 - 2776419 - f 71 -5.4 -4.36914 | GTTGGTGGGATAAAA GCTT ACC AAGC CGACGATCTGTAGCT TERM 2174 2776629 - 2776609 - f 77 -3.9 -4.88407 | GTACGGAACGAAAAA GCTTCTCCT AAT ACGAGAGGC CCATGACGGTACCGT TERM 2175 2778044 - 2778089 + F 93 -16.6 -3.32343 | gap 2, opp_overlap 2778049 2778051 2778056, overlap 2778045 2778049 2778056 TGCTATAATATTTGA C--TCAACACTAAAGCAGTCTC GTGT GAGACTGCTTTAGTGTTGATAG TTATCCAACTATCAA TERM 2176 2778045 - 2778086 + F 100 -26.3 -2.83449 | opp_overlap 2778049 2778051 2778056, overlap 2778044 2778049 2778056 GCTATAATATTTGAC TCAACACTAAAGCAGTCTC GTGT GAGACTGCTTTAGTGTTGA TAGTTATCCAACTAT TERM 2177 2778049 - 2778082 + F 100 -21.3 -3.30474 | opp_overlap 2778049 2778051 2778056, overlap 2778045 2778044 2778056 TAATATTTGACTCAA CACTAAAGCAGTCTC GTGT GAGACTGCTTTAGTG TTGATAGTTATCCAA TERM 2178 2778082 - 2778049 - f 100 -21.3 -3.0792 | opp_overlap 2778045 2778044 2778049 2778056, overlap 2778051 2778056 TAATATTTGACTCAA CACTAAAGCAGTCTC GTGT GAGACTGCTTTAGTG TTGATAGTTATCCAA TERM 2179 2778080 - 2778051 - f 89 -18.1 -3.09505 | opp_overlap 2778049 2778045 2778044 2778056, overlap 2778049 2778056 ATATTTGACTCAACA CTAAAGCAGTCTC GTGT GAGACTGCTTTAG TGTTGATAGTTATCC TERM 2180 2778056 - 2778075 + F 86 -12.2 -3.95424 | opp_overlap 2778056 2778051 2778049, overlap 2778049 2778045 2778044 TGACTCAACACTAAA GCAGTCTC GTGT GAGACTGC TTTAGTGTTGATAGT TERM 2181 2778075 - 2778056 - f 86 -12.2 -3.93782 | opp_overlap 2778049 2778045 2778044 2778056, overlap 2778051 2778049 TGACTCAACACTAAA GCAGTCTC GTGT GAGACTGC TTTAGTGTTGATAGT TERM 2182 2778669 - 2778654 - f 70 -3.2 -4.65078 | AGACGGTTAACAAAA CGGAAT GGAA AGTCCG GCCATAGTAGGTGAT TERM 2183 2778853 - 2778842 - f 71 -7.2 -4.2354 | GAAAGGCGAAAAGAA CCCC GGGA GGGG AGTGAAATAGATCCT TERM 2184 2781487 - 2781525 + F 100 -16.9 -3.90744 | opp_overlap 2781495, overlap 2781488 2781495 TCAGGCTCTTACAGC CCAAGAAACCCCGTAGC CCAAA GCTACGGGGTTTTTTGC TTGTTTGCGCAGAAG TERM 2185 2781488 - 2781524 + F 95 -20.4 -2.94232 | opp_overlap 2781495, overlap 2781487 2781495 CAGGCTCTTACAGCC CAAGAAACCCCGTAGC CCAAA GCTACGGGGTTTTTTG CTTGTTTGCGCAGAA TERM 2186 2781495 - 2781517 + F 100 -14.9 -5.4148 | opp_overlap 2781495, overlap 2781488 2781487 TTACAGCCCAAGAAA CCCCGTAGC CCAAA GCTACGGGG TTTTTTGCTTGTTTG TERM 2187 2781517 - 2781495 - f 100 -15.6 -4.19678 | opp_overlap 2781488 2781487 2781495 TTACAGCCCAAGAAA CCCCGTAGCC CAA AGCTACGGGG TTTTTTGCTTGTTTG Daci_2512 2781601 - 2782350 + | pseudouridine synthase Daci_2513 2782370 - 2783797 + | guanine deaminase TERM 2188 2783799 - 2783823 + F 84 -10 -4.20883 | gap 1, overlap 2783794 2783792 2783799 2783816 TCACTGCTGTCTGAG C-GCCGCAGTC TTTA GGCTGCGGCCG TTTTCCGCATTTTTC TERM 2189 2783816 - 2783832 + F 73 -5.1 -4.66609 | overlap 2783799 2783799 CCGCAGTCTTTAGGC TGCGG CCGTTTT CCGCA TTTTTCCGTCCCATG Daci_2514 2783845 - 2785218 + | xanthine/uracil/vitamin C permease TERM 2190 2785283 - 2785257 - T 100 -18.1 -4.49344 | opp_overlap 2785257 AAACCCATGAGAAAA GGCCATGCGCA GCGGT TGCGCATGGCC TTTTTGCTGGAAGAG TERM 2191 2785257 - 2785283 + T 100 -18.8 -4.72272 | opp_overlap 2785257 AAACCCATGAGAAAA GGCCATGCGCAG CGG TTGCGCATGGCC TTTTTGCTGGAAGAG Daci_2515 2785774 - 2785325 - | RNA-binding S4 domain-containing protein TERM 2192 2785472 - 2785518 + g 78 -9.9 -4.24342 | gap 1 TGGCTCGGGCGCCAG CCGGCGC-TGCTCGGCCAGGCG CTCC CGCTCGGCCAGGCTTGCGGCGG TTTCTTCGTACAGGG Daci_2516 2787266 - 2785779 - | histidine kinase Daci_2517 2788019 - 2787297 - | two component transcriptional regulator Daci_2518 2788120 - 2789079 + | hypothetical protein Daci_2519 2789296 - 2789865 + | hypothetical protein TERM 2193 2790209 - 2790161 - g 100 -20.4 -3.65522 | opp_overlap 2790158 CATGGAGGGCAACAA GATGGCCAAGAGCGGCC-GCGCGG GCG CCGCGCTGGCCAC-CTCCGCCATC GGCTCCTTCGTGGCC Daci_2520 2789865 - 2791379 + | hypothetical protein TERM 2194 2791439 - 2791462 + F 100 -18.2 -5.80364 | CCCGGGCCCCTGACA GCCCCTGCCT TCCG AGGCAGGGGC TTTTTTTATTGGCGT Daci_2521 2791897 - 2796426 + | YD repeat-containing protein Daci_2522 2796462 - 2796797 + | hypothetical protein Daci_2523 2797215 - 2797640 + | putative TIS1421-transposase orfA protein Daci_2524 2797700 - 2798038 + | transposase, IS4 family protein Daci_2525 2799212 - 2798853 - | hypothetical protein TERM 2195 2799023 - 2799011 - G 71 -2.6 -4.60648 | AAAACAGGAAAGAAA GCAG CATGC CCGC ATTGCCATCCACCAC Daci_2526 2799300 - 2799674 + | hypothetical protein Daci_2527 2800740 - 2800988 + | hypothetical protein Daci_2528 2801216 - 2802529 + | GDSL family lipase Daci_2529 2802809 - 2803129 + | ArsR family transcriptional regulator Daci_2530 2803201 - 2804733 + | putative sigma54 specific transcriptional regulator Daci_2531 2804842 - 2806020 + | hypothetical protein Daci_2532 2806896 - 2806087 - | hypothetical protein Daci_2533 2808057 - 2806897 - | hypothetical protein Daci_2534 2808868 - 2808182 - | hypothetical protein Daci_2535 2809634 - 2808891 - | hypothetical protein Daci_2536 2810369 - 2809671 - | hypothetical protein Daci_2537 2810944 - 2810393 - | hypothetical protein Daci_2538 2811332 - 2811102 - | hypothetical protein Daci_2539 2811607 - 2812056 + | peptidase S24/S26 domain-containing protein TERM 2196 2813067 - 2813084 + G 83 -8.5 -4.58663 | opp_overlap 2813067 CTATTGGTACCACAA TCCTGAA GGAT TTCAGGA TTTTTGCGCGCTCGT Daci_2540 2812507 - 2814288 + | hypothetical protein TERM 2197 2814590 - 2814572 - f 79 -16 -2.71731 | opp_overlap 2814572 GGTAGTCGTGAAGGA CCAGCGCC GCA GGCGCTGG TCTCTCGCAGAGAAG TERM 2198 2814572 - 2814590 + F 81 -16 -2.87132 | opp_overlap 2814572 GGTAGTCGTGAAGGA CCAGCGCC GCA GGCGCTGG TCTCTCGCAGAGAAG Daci_2541 2814616 - 2814921 + | transposase IS3/IS911 family protein Daci_2542 2815068 - 2815250 + | integrase, catalytic region Daci_2543 2815967 - 2816815 + | hypothetical protein TERM 2199 2817149 - 2817121 - T 100 -14.6 -4.17425 | gap 1, overlap 2817111 2817110 2817097 2817122 ACAAGCACTTCAAAA GTGGGCGCTGCGG GTCG CCGCAGCACCC-C TCAGAAACTATGCAT TERM 2200 2817149 - 2817122 - T 80 -14.8 -3.09732 | overlap 2817111 2817110 2817097 2817121 CAAGCACTTCAAAAG TGGGCGCTGCGG GTCG CCGCAGCACCCC TCAGAAACTATGCAT Daci_2544 2818253 - 2817150 - | porin Daci_2545 2819233 - 2818382 - | extracellular solute-binding protein Daci_2546 2820283 - 2819309 - | hypothetical protein TERM 2201 2820062 - 2820074 + g 78 -10.5 -4.17048 | GTGGGCCAGGTTGCC GCCCG CGC CGGGC TTGTTTTCCACGACC Daci_2547 2820365 - 2821297 + | LysR family transcriptional regulator Daci_2548 2821582 - 2822163 + | FMN reductase Daci_2549 2822207 - 2823190 + | hypothetical protein Daci_2550 2823299 - 2824324 + | 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase TERM 2202 2824595 - 2824573 - f 82 -9.1 -4.36914 | gap 1 TCCCTCCCCACAAAA GCAGC-GGGC GCCA GCCCAGCCGC CAACCCAAGGAGACA Daci_2551 2824615 - 2825817 + | extracellular ligand-binding receptor Daci_2552 2825821 - 2826603 + | ABC transporter related TERM 2203 2826965 - 2826923 - g 76 -7.5 -4.2558 | gap 1 GACGGTGCAGGAAAA CCTGCTGCTGGCCGCGCGCG GCGC CTCGCGCG-CCGACCGCATG GACGCGCAGCGGCTG TERM 2204 2827287 - 2827265 - g 79 -14.8 -3.35679 | opp_overlap 2827280 2827285 GGCGGTGATGGACAA CGGCCGCGTG GTG CACGCGGGCG GCATGGCCGAGTTCT Daci_2553 2826600 - 2827349 + | ABC transporter related Daci_2554 2827346 - 2828338 + | inner-membrane translocator TERM 2205 2829260 - 2829309 + G 82 -18.5 -2.94218 | gap 1, overlap 2829262 TCTGCAGGACCTGCT GC-GCGTGGCCAGCGAGGCCGCGC ACA GCCTGCCCTGGCTGGCCGCGCTGC TGTCTCCTGACCGCT TERM 2206 2829262 - 2829306 + G 83 -19.9 -2.71268 | overlap 2829260 TGCAGGACCTGCTGC GCGTGGCCAGCGAGGCCGCGC ACA GCCTGCCCTGGCTGGCCGCGC TGCTGTCTCCTGACC Daci_2555 2828352 - 2829419 + | inner-membrane translocator Daci_2556 2829472 - 2831676 + | putative D--3-hydroxybutyrate oligomer hydrolase lipoprotein transmembrane TERM 2207 2831842 - 2831799 - g 77 -14.6 -3.12351 | gap 1 TCCTGCTACACGCAA TGCGCGGGCTACGAGATCCAC TAC ATGGA-CTGGCAGCCCGCGCC CGACGTGGCGCCAGC TERM 2208 2832553 - 2832523 - g 73 -12.4 -3.53091 | overlap 2832524 2832526 AGGTGGCCCGGGAAA TGACCACGCGCGGC CCC GGCGCGCGCGGCCT GCTGCACTGGCAGGA TERM 2209 2832552 - 2832524 - g 74 -15.9 -2.71712 | overlap 2832523 2832526 GGTGGCCCGGGAAAT GACCACGCGCGGC CCC GGCGCGCGCGGCC TGCTGCACTGGCAGG TERM 2210 2832550 - 2832526 - g 72 -14.9 -2.90496 | overlap 2832524 2832523 TGGCCCGGGAAATGA CCACGCGCGGC CCC GGCGCGCGCGG CCTGCTGCACTGGCA Daci_2557 2831742 - 2832650 + | alpha/beta hydrolase fold TERM 2211 2833601 - 2833629 + G 71 -11 -3.54543 | gap 1, overlap 2833603 2833619 AGATATCCGCCGCCC GCCTGGCGCGC CAGCTGCA GCGCGCC-GGC TTTGCCAACGTGCGT Daci_2558 2832760 - 2833755 + | rhodanese domain-containing protein Daci_2559 2833947 - 2833774 - | hypothetical protein Daci_2560 2835071 - 2833959 - | protein of unknown function DUF395 YeeE/YedE TERM 2212 2835037 - 2835023 - G 100 -11.4 -4.90778 | GCCAGCCAAAGAAAA CGGCCA GGA TGGCCG CAAGAGGAAGTCGTT Daci_2561 2836124 - 2835150 - | rhodanese domain-containing protein Daci_2562 2837368 - 2836271 - | ferrochelatase TERM 2213 2837797 - 2837823 + G 81 -3.4 -4.86731 | overlap 2837799 2837804 GCAATGGCGACGACG GCGCGCTGGCCG AGC CGGCCTTCGATC TTTTCTTTGCCGAGC Daci_2563 2837460 - 2838230 + | HAD family hydrolase TERM 2214 2838805 - 2838834 + G 72 -3.6 -4.65895 | overlap 2838774 2838804 2838806 TGTTTGCGATATGGC T-GGCGCTGGGCAG TTTT CTGGC-AGCGCCTA TTTTTGCGTCCAGCG TERM 2215 2838806 - 2838832 + G 70 -8.7 -3.94812 | gap 1, overlap 2838774 2838804 2838805 GTTTGCGATATGGCT GGCGCTGGGCAG TTTT CTGGC-AGCGCC TATTTTTGCGTCCAG Daci_2564 2838261 - 2839094 + | integral membrane protein Daci_2565 2839151 - 2839363 + | hypothetical protein Daci_2566 2840521 - 2839538 - | hypothetical protein TERM 2216 2840633 - 2840608 - R 82 -14.7 -3.18264 | overlap 2840613 GGCGTGAGGCAGGAA GGCAAGGGCCG CATG CGGCCCTTGAC GACGGCGAGACGGCG Daci_2567 2841517 - 2840654 - | 3-hydroxyisobutyrate dehydrogenase Daci_2568 2841926 - 2841528 - | carboxymuconolactone decarboxylase TERM 2217 2842165 - 2842128 - g 78 -10.5 -4.15044 | gap 1, opp_overlap 2842162 TCCCCCGCGAAGAAA CGT-CGCTGCGCCTGCGC ACG ACGCAGACCCTGCGCACG GCCATCCTCGATGGC Daci_2569 2842094 - 2842777 + | GntR family transcriptional regulator Daci_2570 2843836 - 2842817 - | hypothetical protein Daci_2571 2845348 - 2843960 - | squalene-associated FAD-dependent desaturase TERM 2218 2845315 - 2845271 - G 76 -13.6 -3.53224 | opp_overlap 2845295 2845312 2845314 GAGGGCGGCGGCAAA GCCGGCCCAGCCTC-CGCCG ATGATGG CGGCGCGCGGCTGAGC-GGC GCGAGGCGTGTGCTT Daci_2572 2846190 - 2845345 - | squalene synthase HpnD TERM 2219 2846160 - 2846140 - G 81 -8.1 -4.65747 | opp_overlap 2846140 2846139 GAAGGCGTAATAAAA GCTGCTGCC CGA GGCGGCGGC CTTGTCTTGGACGTA Daci_2573 2847142 - 2846258 - | squalene synthase HpnC Daci_2574 2847317 - 2848567 + | RND family efflux transporter MFP subunit Daci_2575 2848564 - 2851779 + | acriflavin resistance protein TERM 2220 2852025 - 2852050 + F 100 -16.9 -5.66684 | GCGAACACTGCTCAA GCCCGCTTCCT GTAG AGGAGGCGGGC TTTTTTTCTGGGTTC TERM 2221 2852409 - 2852384 - g 89 -7.5 -4.87665 | gap 1, opp_overlap 2852384 2852383 2852385, overlap 2852386 GGTCACCGACAAAAA GA-CGGCCAGCA CGG CGCGGGCCGATC ATTTGCGCTTTGATG TERM 2222 2852406 - 2852386 - g 75 -10.3 -4.06182 | opp_overlap 2852385 2852384 2852383, overlap 2852384 TCACCGACAAAAAGA CGGCCAGCA CGG CGCGGGCCG ATCATTTGCGCTTTG Daci_2576 2852172 - 2853188 + | integrase family protein Daci_2577 2853308 - 2853715 + | XRE family transcriptional regulator Daci_2578 2853715 - 2855022 + | HipA domain-containing protein Daci_2579 2855255 - 2855049 - | hypothetical protein Daci_2580 2855538 - 2855290 - | hypothetical protein Daci_2581 2857539 - 2855560 - | replication gene A TERM 2223 2855764 - 2855726 - G 82 -13.6 -3.67792 | GTACAGTTATTGAAA CCAGTCCAAGCGCGCGCC AGC GGCGCGCGGGCGGGCAGG GCGGGCGGGGCGGGC TERM 2224 2857065 - 2857103 + g 78 -12.3 -3.72576 | gap 1 ACCAGGCGGCATCCA GCGCGCGGC-GGATGGCG GGCT CGCCGGCCAGCGGCGTGC TTTCCTGCAGGCCCA Daci_2582 2857996 - 2857544 - | hypothetical protein TERM 2225 2858085 - 2858124 + r 72 -13.6 -2.52795 | gap 1, overlap 2858098 GCGCCGTCAGGAGCG GCGAAGGCGC-CCCGGC CGCGCTA GCTGCGCGCGCCTTCGC TGGATTGGGCGGATT Daci_2583 2858428 - 2858105 - | transcriptional activator Ogr/delta Daci_2584 2858720 - 2858490 - | hypothetical protein Daci_2585 2858798 - 2859130 + | XRE family transcriptional regulator Daci_2586 2860180 - 2859179 - | late control D family protein TERM 2226 2859452 - 2859475 + g 81 -7.3 -4.57073 | overlap 2859454 2859456 GCGCTTTTCGTTGTC CTCGGCGCC CTGCGT GGCGCTGCG TTTTTCGGCGCGATC Daci_2587 2860620 - 2860180 - | P2 GpU family protein Daci_2588 2863469 - 2860632 - | TP901 family phage tail tape measure protein Daci_2589 2863699 - 2863583 - | P2 GpE family protein Daci_2590 2864067 - 2863708 - | tail E family protein TERM 2227 2863764 - 2863754 - G 89 -6.8 -5.14563 | overlap 2863756 TTCGGCACCAAAAAA GAGG CCA CCTC CGTACCCAGGGTCAC TERM 2228 2864128 - 2864095 - R 73 -4.3 -4.63218 | overlap 2864100 TTCGGGTGAAGAAAA GAGGAGGACCGGGCC AACT GGCCCGGTGGGGCCC GGTGAGGTCAGGTCA Daci_2591 2864665 - 2864156 - | phage major tail tube protein Daci_2592 2865922 - 2864729 - | tail sheath protein Daci_2593 2866465 - 2865980 - | hypothetical protein TERM 2229 2866943 - 2867001 + r 100 -21.6 -3.41745 | overlap 2866948 CAAGGCGGCCTGTTG TCCTGGCCGGGCACAGCGCCTGCAGCCT GCA AGGCCGCTGGCGTTGTGCCCGGGTTGCA TTGATGTTCTCGCGG TERM 2230 2866948 - 2866996 + r 100 -26.7 -3.24381 | overlap 2866943 CGGCCTGTTGTCCTG GCCGGGCACAGCGCCTGCAGCCT GCA AGGCCGCTGGCGTTGTGCCCGGG TTGCATTGATGTTCT TERM 2231 2867133 - 2867109 - R 88 -13.6 -3.59979 | gap 1 GTCGGGCATGGCAAA GCTCCGGTCGC AACG GCG-CCGGAGC TAAGTGGATGGCAAG Daci_2594 2867894 - 2867208 - | hypothetical protein Daci_2595 2868181 - 2867891 - | hypothetical protein Daci_2596 2869011 - 2868178 - | hypothetical protein TERM 2232 2868532 - 2868566 + g 73 -7.7 -4.13767 | gap 1, opp_overlap 2868517 2868515 GCGGCCGGCAGCCGA GCCGCGCGGG-GACGG GTCG CCGACACCTGTGGGGC TTTTGAACTGACGCC Daci_2597 2869541 - 2869008 - | hypothetical protein Daci_2598 2872660 - 2869544 - | virulence-associated protein Daci_2599 2873156 - 2872671 - | hypothetical protein Daci_2600 2874139 - 2873159 - | hypothetical protein TERM 2233 2873725 - 2873714 - G 73 -7.2 -4.11371 | GAAGACGCGGTAAAA GCGC ACGT GCGC CGGCAGGCTGGCGCG TERM 2234 2873971 - 2873939 - G 70 -15.5 -2.71144 | CACGTCGTCGAAGTA GCGGTCGAACTGGGC AAT GCCCCATTCGGCCGC CAGCCAGGGCAGAAA TERM 2235 2874064 - 2874020 - G 84 -16.3 -3.53012 | opp_overlap 2874020 2874020 GGCCGGCGCGGGAAA GGCGCCGGCCAGGCCGTCCCA ATT CGGGACGACCTGGTCCACGGC CTTCTCCAGCGCCGT TERM 2236 2874020 - 2874065 + g 74 -13.2 -3.28924 | gap 1, opp_overlap 2874020, overlap 2874020 GGCCGGCGCGGGAAA GG-CGCCGGCCAGGCCGTCCC AATTC GGGACGACCTGGTCCACGGCC TTCTCCAGCGCCGTG Daci_2601 2874993 - 2874136 - | baseplate J family protein Daci_2602 2875340 - 2874990 - | GPW/gp25 family protein Daci_2603 2875990 - 2875337 - | phage baseplate assembly protein V Daci_2604 2876550 - 2876041 - | P2 phage tail completion R family protein Daci_2605 2877100 - 2876534 - | hypothetical protein Daci_2606 2877681 - 2877100 - | prophage LambdaSo, lysozyme, putative Daci_2607 2877944 - 2877678 - | hypothetical protein Daci_2608 2878149 - 2877946 - | tail X family protein TERM 2237 2878516 - 2878486 - R 100 -24.2 -3.97368 | opp_overlap 2878492 TGCCGAATGCAGAAA TGACAAGACCCCGC AGG GCGGGGTCTTGTCA TGGTGCGGGTGAGAG TERM 2238 2878492 - 2878510 + r 93 -16 -3.44051 | opp_overlap 2878486 ATGCAGAAATGACAA GACCCCGC AGG GCGGGGTC TTGTCATGGTGCGGG Daci_2609 2878753 - 2878535 - | hypothetical protein TERM 2239 2879035 - 2879060 + H 100 -16.9 -5.66684 | GCGAACACTGCTCAA GCCCGCTTCCT GTAG AGGAGGCGGGC TTTTTTTCTGGGTTC TERM 2240 2879419 - 2879394 - g 89 -7.5 -4.87665 | gap 1, opp_overlap 2879393 2879394 2879395, overlap 2879396 GGTCACCGACAAAAA GA-CGGCCAGCA CGG CGCGGGCCGATC ATTTGCGCTTTGATG TERM 2241 2879416 - 2879396 - g 75 -10.3 -4.06182 | opp_overlap 2879395 2879394 2879393, overlap 2879394 TCACCGACAAAAAGA CGGCCAGCA CGG CGCGGGCCG ATCATTTGCGCTTTG Daci_2610 2879182 - 2880198 + | integrase family protein Daci_2611 2880318 - 2880725 + | XRE family transcriptional regulator Daci_2612 2880725 - 2882032 + | HipA domain-containing protein Daci_2613 2882265 - 2882059 - | hypothetical protein Daci_2614 2882548 - 2882300 - | hypothetical protein Daci_2615 2884549 - 2882570 - | replication gene A TERM 2242 2882774 - 2882736 - G 82 -13.6 -3.67792 | GTACAGTTATTGAAA CCAGTCCAAGCGCGCGCC AGC GGCGCGCGGGCGGGCAGG GCGGGCGGGGCGGGC TERM 2243 2884075 - 2884113 + g 78 -12.3 -3.72576 | gap 1 ACCAGGCGGCATCCA GCGCGCGGC-GGATGGCG GGCT CGCCGGCCAGCGGCGTGC TTTCCTGCAGGCCCA Daci_2616 2885006 - 2884554 - | hypothetical protein TERM 2244 2885095 - 2885134 + r 72 -13.6 -2.52795 | gap 1, overlap 2885108 GCGCCGTCAGGAGCG GCGAAGGCGC-CCCGGC CGCGCTA GCTGCGCGCGCCTTCGC TGGATTGGGCGGATT Daci_2617 2885438 - 2885115 - | transcriptional activator Ogr/delta Daci_2618 2885730 - 2885500 - | hypothetical protein Daci_2619 2885808 - 2886140 + | XRE family transcriptional regulator Daci_2620 2887190 - 2886189 - | late control D family protein TERM 2245 2886462 - 2886485 + g 81 -7.3 -4.57073 | overlap 2886464 2886466 GCGCTTTTCGTTGTC CTCGGCGCC CTGCGT GGCGCTGCG TTTTTCGGCGCGATC Daci_2621 2887630 - 2887190 - | P2 GpU family protein Daci_2622 2890479 - 2887642 - | TP901 family phage tail tape measure protein Daci_2623 2890709 - 2890593 - | P2 GpE family protein Daci_2624 2891077 - 2890718 - | tail E family protein TERM 2246 2890774 - 2890764 - G 89 -6.8 -5.14563 | overlap 2890766 TTCGGCACCAAAAAA GAGG CCA CCTC CGTACCCAGGGTCAC TERM 2247 2891138 - 2891105 - R 73 -4.3 -4.63218 | overlap 2891110 TTCGGGTGAAGAAAA GAGGAGGACCGGGCC AACT GGCCCGGTGGGGCCC GGTGAGGTCAGGTCA Daci_2625 2891675 - 2891166 - | phage major tail tube protein Daci_2626 2892932 - 2891739 - | tail sheath protein Daci_2627 2893475 - 2892990 - | hypothetical protein TERM 2248 2893953 - 2894011 + r 100 -21.6 -3.41745 | overlap 2893958 CAAGGCGGCCTGTTG TCCTGGCCGGGCACAGCGCCTGCAGCCT GCA AGGCCGCTGGCGTTGTGCCCGGGTTGCA TTGATGTTCTCGCGG TERM 2249 2893958 - 2894006 + r 100 -26.7 -3.24381 | overlap 2893953 CGGCCTGTTGTCCTG GCCGGGCACAGCGCCTGCAGCCT GCA AGGCCGCTGGCGTTGTGCCCGGG TTGCATTGATGTTCT TERM 2250 2894143 - 2894119 - R 88 -13.6 -3.59979 | gap 1 GTCGGGCATGGCAAA GCTCCGGTCGC AACG GCG-CCGGAGC TAAGTGGATGGCAAG Daci_2628 2894904 - 2894218 - | hypothetical protein Daci_2629 2895191 - 2894901 - | hypothetical protein Daci_2630 2896021 - 2895188 - | hypothetical protein TERM 2251 2895542 - 2895576 + g 73 -7.7 -4.13767 | gap 1, opp_overlap 2895527 2895525 GCGGCCGGCAGCCGA GCCGCGCGGG-GACGG GTCG CCGACACCTGTGGGGC TTTTGAACTGACGCC Daci_2631 2896551 - 2896018 - | hypothetical protein Daci_2632 2899670 - 2896554 - | virulence-associated protein Daci_2633 2900166 - 2899681 - | hypothetical protein Daci_2634 2901149 - 2900169 - | hypothetical protein TERM 2252 2900735 - 2900724 - G 73 -7.2 -4.11371 | GAAGACGCGGTAAAA GCGC ACGT GCGC CGGCAGGCTGGCGCG TERM 2253 2900981 - 2900949 - G 70 -15.5 -2.71144 | CACGTCGTCGAAGTA GCGGTCGAACTGGGC AAT GCCCCATTCGGCCGC CAGCCAGGGCAGAAA TERM 2254 2901030 - 2901075 + g 74 -13.2 -3.28924 | gap 1, opp_overlap 2901030, overlap 2901030 GGCCGGCGCGGGAAA GG-CGCCGGCCAGGCCGTCCC AATTC GGGACGACCTGGTCCACGGCC TTCTCCAGCGCCGTG TERM 2255 2901074 - 2901030 - G 84 -16.3 -3.53012 | opp_overlap 2901030 2901030 GGCCGGCGCGGGAAA GGCGCCGGCCAGGCCGTCCCA ATT CGGGACGACCTGGTCCACGGC CTTCTCCAGCGCCGT Daci_2635 2902003 - 2901146 - | baseplate J family protein Daci_2636 2902350 - 2902000 - | GPW/gp25 family protein Daci_2637 2903072 - 2902347 - | phage baseplate assembly protein V Daci_2638 2903560 - 2903051 - | P2 phage tail completion R family protein Daci_2639 2904110 - 2903544 - | hypothetical protein Daci_2640 2904691 - 2904110 - | prophage LambdaSo, lysozyme, putative Daci_2641 2904954 - 2904688 - | hypothetical protein Daci_2642 2905159 - 2904956 - | tail X family protein TERM 2256 2905526 - 2905496 - R 100 -24.2 -3.97368 | opp_overlap 2905502 TGCCGAATGCAGAAA TGACAAGACCCCGC AGG GCGGGGTCTTGTCA TGGTGCGGGTGAGAG TERM 2257 2905502 - 2905520 + r 93 -16 -3.44051 | opp_overlap 2905496 ATGCAGAAATGACAA GACCCCGC AGG GCGGGGTC TTGTCATGGTGCGGG Daci_2643 2905763 - 2905545 - | hypothetical protein Daci_2644 2906335 - 2907645 + | trigger factor TERM 2258 2907703 - 2907732 + F 100 -13.6 -4.87803 | overlap 2907704 GCGGGTTGGCATCTG CGGGGCTTGTGC TTTGGC GCACAAGCCCCA TTTTCTTTCCGGATA TERM 2259 2907704 - 2907731 + F 100 -17.1 -3.51958 | overlap 2907703 CGGGTTGGCATCTGC GGGGCTTGTGC TTTGGC GCACAAGCCCC ATTTTCTTTCCGGAT Daci_2645 2907781 - 2908389 + | ATP-dependent Clp protease, proteolytic subunit ClpP TERM 2260 2908414 - 2908443 + F 100 -18 -3.89938 | opp_overlap 2908412 2908411, overlap 2908405 GCTGCATGAGAATGG GCGGCGTTTTCC CCCTAC GGAAAACGCCGC TTTCCATTTGGTTAT Daci_2646 2908497 - 2909759 + | ATP-dependent protease ATP-binding subunit Daci_2647 2909880 - 2912294 + | ATP-dependent protease La TERM 2261 2912344 - 2912306 - f 100 -10.4 -5.27779 | opp_overlap 2912305 CTGAAGATGAAAAAA TGTAGCGTTTTTCCTGAA CCC TCCAAGAACTACGCTACA ATTCATCCCATCGCA TERM 2262 2912645 - 2912669 + F 77 -3.6 -5.0133 | overlap 2912609 CTGGTGCGCATCCGA TTCAGGTGAC GGTTG GTTGCTTGAA TTTTTTGCGGGAATA TERM 2263 2912778 - 2912762 - f 78 -6.5 -4.59773 | opp_overlap 2912762 2912763, overlap 2912763 CTCCAGTTTTAAAAA CTGCAGC AAT GCTGCAT GTTTGATAGTGATCT TERM 2264 2912763 - 2912777 + F 70 -10 -3.48738 | opp_overlap 2912762 2912763, overlap 2912762 TCCAGTTTTAAAAAC TGCAGC AAT GCTGCA TGTTTGATAGTGATC TERM 2265 2912898 - 2912911 + F 100 -9.5 -5.69262 | opp_overlap 2912898 ATACAGTGTTCAAAA GGCCC TTCG GGGCC TTTTTCTTTTTCTGC TERM 2266 2912911 - 2912898 - f 76 -9.5 -4.10925 | opp_overlap 2912898 ATACAGTGTTCAAAA GGCCC TTCG GGGCC TTTTTCTTTTTCTGC Daci_2648 2913252 - 2914016 + | peptidase M48 Ste24p TERM 2267 2914067 - 2914082 + F 83 -4.7 -5.03145 | opp_overlap 2914059, overlap 2914055 CAAGGCAGGCTGTGA TCTGC CTTGGT GCAGA TTTTTTACGGGCTTC TERM 2268 2914254 - 2914273 + F 100 -13.6 -4.90869 | opp_overlap 2914254 CCAATTCAGAAAAAA GGGAAGCG GTAA CGCTTCCC TTTTTCGTTGGTGCT TERM 2269 2914273 - 2914254 - f 100 -13.6 -5.31456 | opp_overlap 2914254 CCAATTCAGAAAAAA GGGAAGCG GTAA CGCTTCCC TTTTTCGTTGGTGCT Daci_2649 2914685 - 2915386 + | hypothetical protein Daci_2650 2915419 - 2916030 + | hypothetical protein Daci_2651 2916922 - 2916032 - | glutamate racemase Daci_2652 2917568 - 2916981 - | GCN5-related N-acetyltransferase Daci_2653 2918197 - 2917565 - | methyltransferase type 11 TERM 2270 2918276 - 2918259 - R 89 -10.5 -4.45544 | opp_overlap 2918257 2918259 CCGCACCAATGAAAA GACCGCC CGAA GGCGGCC TCTTTGCGCTTGGCA Daci_2654 2919851 - 2918298 - | tartrate/fumarate subfamily Fe-S type hydro-lyase alpha subunit TERM 2271 2919152 - 2919168 + g 72 -6.5 -4.36914 | overlap 2919153 GCTCCAGGCGCAGTT CCTCGAC CTG GTCGAGC TTTTCTCCGCGCGCG Daci_2655 2920165 - 2921556 + | fumarate hydratase TERM 2272 2921580 - 2921599 + T 100 -15 -5.65513 | opp_overlap 2921580 GATGCAATCAAAAAA GGGGAGCC GGCC GGCTCCCC TTTTTTTGCTTCATG TERM 2273 2921599 - 2921580 - T 100 -15 -5.28481 | opp_overlap 2921580 GATGCAATCAAAAAA GGGGAGCC GGCC GGCTCCCC TTTTTTTGCTTCATG Daci_2656 2922521 - 2921622 - | putative esterase Daci_2657 2923699 - 2922668 - | major facilitator transporter Daci_2658 2924210 - 2923701 - | MarR family transcriptional regulator TERM 2274 2924205 - 2924263 + g 76 -13.5 -3.53012 | gap 1, opp_overlap 2924210 2924226, overlap 2924229 GGGGGCGGAAGGGGA CGACATCGGGTGATATTCAAATAGTTGG CATC CCAATTATCTGCATATCAAC-GATGTCG TTTGCGGGGCCGCCC Daci_2659 2925047 - 2924361 - | hypothetical protein TERM 2275 2925130 - 2925163 + H 71 -8.8 -3.74693 | gap 1 CGAAGGCGTATTCTG GATGCCGGACCGGGC AGCCC GCCGGGTCCG-CACC TTTGATGCAATGGAG Daci_2660 2925187 - 2925825 + | putative ParB-like nuclease TERM 2276 2925920 - 2925945 + G 74 -16.1 -2.75535 | overlap 2925915 GGCCTATTCCGGCAT CGCCGGCCTGC CGCC GCAGGCCGGGG TGATTGCGCTGTTCG Daci_2661 2925825 - 2927450 + | sulphate transporter Daci_2662 2928458 - 2927472 - | LacI family transcription regulator TERM 2277 2929419 - 2929448 + G 86 -13.5 -3.87815 | gap 1 GAATCGCCCGCCACG GGCTGGCTGCCGCC GCT GGC-GCGGCCTGCC TTTGTGGGCCTGGGC TERM 2278 2930415 - 2930386 - g 70 -8.5 -3.95424 | gap 1 ACGAGCAATACGAAA CCTACCGCGCCATG GCG CA-GGCGCTGGAGG GGCGGCCGCTGATCG Daci_2663 2928564 - 2931137 + | phosphoenolpyruvate-protein phosphotransferase Daci_2664 2931134 - 2932099 + | 1-phosphofructokinase Daci_2665 2932123 - 2933850 + | PTS system, fructose subfamily, IIC subunit TERM 2279 2933828 - 2933845 + T 86 -14.1 -3.53343 | opp_overlap 2933828 TGCGCATGTTCAAAA GGCCCGC CGAA GCGGGCC TTTGAAGCGGGCCTT TERM 2280 2933845 - 2933828 - T 95 -14.1 -4.11216 | opp_overlap 2933828 TGCGCATGTTCAAAA GGCCCGC CGAA GCGGGCC TTTGAAGCGGGCCTT Daci_2666 2934955 - 2933909 - | glycine betaine transporter periplasmic subunit TERM 2281 2934691 - 2934666 - G 74 -11.9 -3.72576 | gap 1 TGCGTGGCCAGGAAA GTGGCG-TCGCC ATT GGCAATCGCCAC GTGGGCCGTGGGGTA TERM 2282 2934993 - 2935013 + r 100 -18.3 -4.07568 | ATGAAAGGGGAGTGG GCGGCCAGC GTG GCTGGCCGC TTTTCGGGAAGGCGG Daci_2667 2936265 - 2935066 - | binding-protein-dependent transport systems inner membrane component Daci_2668 2937617 - 2936262 - | glycine betaine/L-proline ABC transporter, ATPase subunit TERM 2283 2937650 - 2937619 - R 72 -13.1 -3.12142 | gap 1, overlap 2937615 2937617 GTGAGATGGAACACA GTCCAGCGTCCTCG ACGGG CGAAGACGCTGG-C GCGCAAGCCAAAAAT TERM 2284 2938219 - 2938205 - R 76 -7 -4.57073 | overlap 2938206 GATCTGCGGCAAAAA GCGTGC CTG GCGCGC TGGCCGGCCGGGCGC TERM 2285 2938533 - 2938574 + r 76 -10.1 -3.71645 | opp_overlap 2938537 CCCCCAATCTGCCAA TCGATAGCTCGCACCGTCG AAGC CGATGATGCGGGCGATCCA TTTCGATGTGGCATT Daci_2669 2939670 - 2938768 - | methylenetetrahydrofolate reductase Daci_2670 2940430 - 2939762 - | hypothetical protein Daci_2671 2940927 - 2940427 - | LysR family transcriptional regulator Daci_2672 2942506 - 2940968 - | integrase catalytic region TERM 2286 2942504 - 2942531 + g 81 -4.1 -4.84359 | opp_overlap 2942506 2942510, overlap 2942506 GTCTGCGTATGAGTA CATGAACTACC TCCCCT GGTAGTCCAAG TTTTTGTCCGCATCC Daci_2673 2944067 - 2943084 - | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding TERM 2287 2943795 - 2943783 - G 76 -7.7 -4.25056 | GAGGTCAGGAACAAA GGTGA CGC TCACC CCGGCTTGTGCGCAA Daci_2674 2944876 - 2944076 - | phosphonate ABC transporter, inner membrane subunit Daci_2675 2945751 - 2944873 - | phosphonate ABC transporter, periplasmic phosphonate-binding protein Daci_2676 2946584 - 2945745 - | phosphonate ABC transporter, ATPase subunit TERM 2288 2946371 - 2946392 + g 78 -8.7 -4.36914 | CTACCCCACCTGCCA GGCCAGGTA TCGA TACCTCGCC TTTTGTGGGCAGCAC TERM 2289 2947039 - 2947028 - g 82 -5.8 -4.68593 | GGCAGCAGCCAAAAA CCGA TTCG TCGG GCGTCTTGTGATTCA Daci_2677 2946783 - 2947643 + | LysR family transcriptional regulator Daci_2678 2947751 - 2948218 + | hypothetical protein Daci_2679 2951187 - 2948215 - | transposase Tn3 family protein TERM 2290 2948640 - 2948650 + g 72 -8.2 -4.08216 | GCTCGCGCAGGGCGA CGGC CAA GCCG TTTTGGCGCGGATAG TERM 2291 2950136 - 2950160 + g 82 -9.2 -4.50159 | overlap 2950137 2950138 GGCATGACCGCTTCG ATGGCGGCGA ACGGA TCGCCGCCGC TTTGTTTGGCTTCAA TERM 2292 2950137 - 2950159 + g 70 -12.7 -3.29372 | overlap 2950136 2950138 GCATGACCGCTTCGA TGGCGGCGA ACGGA TCGCCGCCG CTTTGTTTGGCTTCA Daci_2680 2951747 - 2951190 - | resolvase domain-containing protein TERM 2293 2951302 - 2951315 + g 75 -6.7 -4.49556 | AACTCGGCAATTTGT TCGCT GTTC AGCGA TTTCTTTCGTCCCCG Daci_2681 2953353 - 2951878 - | RND efflux system outer membrane lipoprotein TERM 2294 2952183 - 2952200 + g 86 -6.9 -5.0133 | opp_overlap 2952185, overlap 2952185 CTGCGGCGGCATCAA AAGCGGC GAGC GCCGCTC TTTTTTCAGCGGGTA TERM 2295 2952198 - 2952185 - G 81 -9.5 -4.25104 | opp_overlap 2952183 2952185 GCGGCGGCATCAAAA GCGGC GAGC GCCGC TCTTTTTTCAGCGGG TERM 2296 2952185 - 2952198 + g 78 -9.5 -4.13561 | opp_overlap 2952185, overlap 2952183 GCGGCGGCATCAAAA GCGGC GAGC GCCGC TCTTTTTTCAGCGGG TERM 2297 2952259 - 2952231 - G 79 -5.1 -4.72272 | overlap 2952255 GCCCTGGATTAAAAA GAGGCTGGGTGAG CTG CGCAACCAGGCCC CACACTGCCGAGCCA Daci_2682 2953813 - 2953340 - | hypothetical protein Daci_2683 2954552 - 2953842 - | ABC transporter related TERM 2298 2954313 - 2954278 - G 75 -8.3 -4.19735 | opp_overlap 2954277, overlap 2954279 GCCTGGAAAACGAAA CCG-ATCTTGTCGCGCC GCAA GGCGCG-CAAGTCGCGG ACTTTCCAGCCATCG Daci_2684 2955759 - 2954554 - | hypothetical protein TERM 2299 2954813 - 2954828 + g 75 -6 -4.43844 | opp_overlap 2954814, overlap 2954814 CCGATGAGCTTCAAC ACCGCG ATCT CGCGGA TTTTGTCCATCGTCA Daci_2685 2956907 - 2955756 - | RND family efflux transporter MFP subunit Daci_2686 2957512 - 2956904 - | TetR family transcriptional regulator Daci_2687 2957910 - 2958164 + | SCO1/SenC family protein Daci_2688 2958191 - 2958670 + | hypothetical protein Daci_2689 2959062 - 2958787 - | hypothetical protein Daci_2690 2960327 - 2959059 - | conjugation TrbI family protein TERM 2300 2959912 - 2959893 - G 72 -3.4 -4.62069 | opp_overlap 2959908, overlap 2959896 GCCCGAGCGGAAAAA CACCGACG AGTT CGCCGCCG CATCGGCCTCCTTGC Daci_2691 2961331 - 2960330 - | P-type conjugative transfer protein TrbG TERM 2301 2960972 - 2960938 - G 74 -12 -3.64703 | CGGGCTGCAGCGAAA CCACCGTCACGCGGCC CAC GGCCGCGTAGAGCTGG TAAAGCGCGCCATCG TERM 2302 2961057 - 2961073 + g 72 -9.3 -3.96148 | CGGGCCTCGGCATTG GCGCGCG AGA CGCGCAC TTTCTCATCCGCGGG Daci_2692 2962032 - 2961328 - | conjugal transfer protein TERM 2303 2961601 - 2961633 + g 73 -9.7 -3.94409 | overlap 2961581 2961602 2961624 CGCGAACGGGTCATT CGTGCGGGCGTACTC GTT GAGCACGACCGCGCC TTTGTCGGTCGTGTA Daci_2693 2963403 - 2962051 - | P-type conjugative transfer protein TrbL TERM 2304 2962918 - 2962905 - G 76 -8.1 -4.26076 | TCAGCGTGATGAAAA GCTGG ATCG CCAGC ACGAAGAAGCACAGC TERM 2305 2963414 - 2963453 + r 74 -12.1 -3.14931 | gap 1 TTCATGGCGAGTCCT CCTGCCCA-GGCAGAGCG ATTGC CGCGCTGCCATCGGCGGG TTCATCGAAGCTGGG Daci_2694 2963726 - 2963400 - | putative lipoprotein TERM 2306 2963563 - 2963532 - G 83 -13.1 -4.03234 | gap 2 CTGGCCGGAGAGAAA GCGCCGCAGGTCGGC CTGG GCC-ACCTGCG-CGC AAAGCGCGCCGTCGT Daci_2695 2964493 - 2963738 - | P-type conjugative transfer protein TrbJ TERM 2307 2964227 - 2964278 + g 70 -14.5 -2.78216 | overlap 2964224 GGTGGTCGCCAGATT GGCGCGCAAT-TGGCCGACCACGCT GGAC GGCA-GGCTGGCCAGATTGCGCGCC TGGTTGATGAGCATC Daci_2696 2966961 - 2964490 - | AAA ATPase TERM 2308 2966070 - 2966108 + g 90 -14 -4.07687 | gap 1, opp_overlap 2966076, overlap 2966048 GCGGGCTTTCCTGCT GGAAGATCGTC-TCGCG CAGCAA CGCGATGACGTTCTTCC TTTTCGCAAACCACT Daci_2697 2967248 - 2966976 - | putative conjugal transfer TrbD transmembrane protein Daci_2698 2967622 - 2967245 - | conjugal transfer protein TrbC Daci_2699 2968653 - 2967619 - | P-type conjugative transfer ATPase TrbB TERM 2309 2967709 - 2967661 - G 72 -5.9 -4.29738 | gap 1 GGACAGGGAGGAAAA GTCGGACTGCGGCAGCAGCTCC GGGAAT GGAGCCTCCAGCGCA-TCCGCC AGGTGGTAGCCCACG Daci_2700 2969114 - 2968650 - | CopG/DNA-binding domain-containing protein Daci_2701 2971120 - 2969111 - | TRAG family protein TERM 2310 2969655 - 2969688 + g 71 -11.7 -3.55563 | gap 1, overlap 2969651 2969675 2969676 TGGCCTGCGTAGTTG CGCTGTGCGC-GCAGC TCG GTTGCAGTGCCCAGCG TTTCGGAGATCCGCT TERM 2311 2971286 - 2971260 - R 100 -10.2 -5.13741 | gap 1 CGAAGGCAATAAAAA CGCCGCAGACG GGAGCG CGT-TGCGGCG TAGTGAGGTGTCAGC Daci_2702 2971492 - 2971337 - | putative lipoprotein TERM 2312 2971385 - 2971374 - G 73 -7.2 -4.20516 | overlap 2971375 CGGTCACCGAAGAAA CGCC GATT GGCG GCTTCGGCAGCACGG Daci_2703 2972504 - 2971590 - | LysR family transcriptional regulator Daci_2704 2972969 - 2972547 - | diacylglycerol kinase Daci_2705 2974654 - 2972981 - | sulfatase TERM 2313 2974402 - 2974387 - G 72 -4.6 -4.42238 | overlap 2974389 GCACCGCAAGTAAAA CCCTGG CATT CCAGCG CCATACAACCAAACT Daci_2706 2975433 - 2974651 - | hypothetical protein Daci_2707 2976667 - 2975420 - | outer membrane efflux protein TERM 2314 2975707 - 2975763 + g 71 -11.5 -3.64703 | gap 3 CGACCCACGCACCTT GCTCCACCGCGCGCCGCACGCCGAGCGC CTCG GC-CTCTGCG-GCCGC-CGCGTTGGCGC TTTCCGTGGCGGCCA TERM 2315 2976671 - 2976700 + r 75 -2.7 -4.92756 | gap 1, opp_overlap 2976652, overlap 2976675 GATAGCCACCATGAC GGCACCAGCC-GGT AGT ACCAGGCTGCATCC TTTGTTTTTACTCGT Daci_2708 2977035 - 2976715 - | hypothetical protein Daci_2709 2980127 - 2977032 - | CzcA family heavy metal efflux protein Daci_2710 2981364 - 2980141 - | RND family efflux transporter MFP subunit Daci_2711 2981675 - 2982226 + | cytochrome B561 Daci_2712 2982268 - 2982975 + | hypothetical protein Daci_2713 2984401 - 2982989 - | histidine kinase Daci_2714 2985070 - 2984405 - | two component transcriptional regulator TERM 2316 2984582 - 2984551 - G 91 -10.8 -4.6526 | gap 1, overlap 2984552 ACAAATGTTCAAAAA TCTGCG-GGCGCGAC AGC GTGGCGCCGCGCCGA CGCAGCAGCAAGTCG Daci_2715 2986428 - 2985085 - | ferric reductase domain-containing protein TERM 2317 2985682 - 2985658 - G 74 -11.3 -3.75629 | opp_overlap 2985662 2985674 CATGGCGAAGGCAAA CTGTCCGGGCC GGT GGCCGGGCCAG GCCGGGTCCATTCGC Daci_2716 2989025 - 2986644 - | hypothetical protein TERM 2318 2988030 - 2988057 + g 76 -14.2 -3.42503 | gap 1, overlap 2988021 GCCGGTGTCGTCGCG CCCGCGCACG-AC TAT GTGCGTGTGCGGG TTGTCGGTGTTCCAG Daci_2717 2989674 - 2989087 - | putative conjugal transfer TRAF transmembrane protein Daci_2718 2990195 - 2989671 - | hypothetical protein Daci_2719 2990455 - 2990192 - | hypothetical protein TERM 2319 2990394 - 2990435 + g 72 -14.4 -3.14344 | opp_overlap 2990375 TCGGCGTGCGGATTC GCGGGCGGGCGAGCGC CGATGCCGAT GCGCTTGCCCGTGCGC TTGCTGGCAGGAGTG Daci_2720 2991090 - 2990452 - | cobyrinic acid ac-diamide synthase TERM 2320 2991037 - 2991063 + g 79 -11.6 -4.05446 | gap 1, overlap 2990998 2991005 GCCGGCGATGTGGGT GGCGAGCGTGG TCTTGC CCACGC-CGCC TTTCTGGTTGAGCAG Daci_2721 2992201 - 2991344 - | putative replication initiator and transcription repressor protein Daci_2722 2992524 - 2992228 - | hypothetical protein TERM 2321 2992655 - 2992669 + H 95 -7.1 -5.46657 | opp_overlap 2992655 CGGAAGCTACTCAAA CCCCT CTTGC AGGGG TTTTTTCTTGACCTA Daci_2723 2992818 - 2993123 + | hypothetical protein Daci_2724 2993131 - 2994531 + | integrase family protein Daci_2725 2994541 - 2997150 + | integrase family protein TERM 2322 2997412 - 2997387 - g 74 -11.1 -3.72576 | gap 1 CGGGTGCTCATTAAA GCGTGGTCCGCC TAT GCCGGACC-CGC TGAGCCCAAGCTACC Daci_2726 2997147 - 2997827 + | alpha/beta hydrolase fold TERM 2323 2997833 - 2997854 + T 84 -11.5 -4.0616 | opp_overlap 2997833 AATTCCATGAAAAAA GCGCCGAAG TTGC CCTCGGCGC TTTGTAGTTACGATG TERM 2324 2997854 - 2997833 - T 100 -13.7 -5.16237 | opp_overlap 2997833 AATTCCATGAAAAAA GCGCCGAAG TTGC CCTCGGCGC TTTGTAGTTACGATG TERM 2325 2997982 - 2998012 + T 72 -11.3 -3.28712 | opp_overlap 2997982 2998007 AATGAGTCAATTAAA GGGTCGTTTTG CGCTCTCTT CAAAACGACCC TTCTCAAGCGGCGGC TERM 2326 2998012 - 2997982 - T 82 -11.3 -3.94404 | opp_overlap 2997982, overlap 2998007 AATGAGTCAATTAAA GGGTCGTTTTG CGCTCTCTT CAAAACGACCC TTCTCAAGCGGCGGC Daci_2727 2998737 - 2997973 - | hypothetical protein Daci_2728 2999426 - 2999079 - | putative lipoprotein TERM 2327 2999144 - 2999130 - G 70 -12.8 -3.31461 | CAGGTACTCCGACAA CGGGCG CAC CGCCCG GAAATACCGATCTCG TERM 2328 2999486 - 2999451 - H 71 -5.4 -4.38712 | gap 1, opp_overlap 2999467 2999474 2999475, overlap 2999467 2999475 CTCATTCGCACAAAA CCGCCGAAGCGTG AAAGCGCAAAA C-CGCATCGGCGG GTTTGTGGAAAGGCA TERM 2329 2999518 - 2999467 - H 88 -13.8 -3.60792 | opp_overlap 2999467 2999474 2999475, overlap 2999451 2999475 CGCCGAAGCGTGAAA GCGCAAAACCGCATCGGCGGGTTT GTGG AAAGGCACGGATGCGGTTTTGTGC TTCTGTGAGAAGCTG TERM 2330 2999467 - 2999518 + H 86 -13.8 -3.48593 | opp_overlap 2999451 2999467 2999475, overlap 2999474 2999475 CGCCGAAGCGTGAAA GCGCAAAACCGCATCGGCGGGTTT GTGG AAAGGCACGGATGCGGTTTTGTGC TTCTGTGAGAAGCTG TERM 2331 2999486 - 2999475 - H 71 -7.2 -4.24002 | opp_overlap 2999474 2999467 2999475, overlap 2999451 2999467 CGTGAAAGCGCAAAA CCGC ATCG GCGG GTTTGTGGAAAGGCA TERM 2332 2999475 - 2999510 + H 73 -4.6 -4.60073 | opp_overlap 2999451 2999475 2999467, overlap 2999474 2999467 CGTGAAAGCGCAAAA CCGCATCGGCGGGTTT GTGG AAAGGCACGGATGCGG TTTTGTGCTTCTGTG Daci_2729 2999650 - 2999943 + | helix-turn-helix domain-containing protein TERM 2333 3000294 - 3000254 - T 83 -16.1 -3.05463 | gap 1, opp_overlap 3000283, overlap 3000262 AGTCTGCTGATCCAA GCAGTACAGCGCCCCGCC GCAGTG GGCGGGGCGCTGG-CGGC CGTCAGGCCGCCTGG TERM 2334 3000287 - 3000262 - T 88 -19 -2.8664 | opp_overlap 3000283, overlap 3000254 GATCCAAGCAGTACA GCGCCCCGCC GCAGTG GGCGGGGCGC TGGCGGCCGTCAGGC Daci_2730 3000611 - 3000297 - | hypothetical protein TERM 2335 3001388 - 3001342 - H 89 -17.8 -3.12351 | overlap 3001320 3001366 GGCCGTGACAGCGAA GTCGGCACGGGGCGCAGCCCGA AAG CCCGGCGGCGCTACGCGCCGAC ACGCCCAGGCCGTTC TERM 2336 3001392 - 3001366 - H 77 -11.4 -3.57144 | opp_overlap 3001390, overlap 3001342 GGGCGCAGCCCGAAA GCCCGGCGGCGC TAC GCGCCGACACGC CCAGGCCGTTCTATA TERM 2337 3001851 - 3001872 + G 88 -12.3 -4.38712 | gap 1, overlap 3001852 ATGCGGGCCTGCAAC T-GCCGGGCG TGC CGCCCGGCTA TTTTCTCGCACTGGC TERM 2338 3001852 - 3001870 + G 95 -17.4 -3.80133 | overlap 3001851 TGCGGGCCTGCAACT GCCGGGCG TGC CGCCCGGC TATTTTCTCGCACTG Daci_2731 3001433 - 3001951 + | GCN5-related N-acetyltransferase TERM 2339 3001999 - 3002026 + T 100 -19.8 -3.47349 | opp_overlap 3002000, overlap 3001993 3002000 3002025 CTATTCGGCTTCAAC ACCGGGCGCGGC CACC GCCGCGCCCGGA TTATGCGTTTCACCG TERM 2340 3002000 - 3002025 + T 100 -23.3 -2.68088 | opp_overlap 3002000, overlap 3001999 3001993 TATTCGGCTTCAACA CCGGGCGCGGC CACC GCCGCGCCCGG ATTATGCGTTTCACC TERM 2341 3002025 - 3002000 - T 100 -23.3 -3.01924 | opp_overlap 3002000 3001999 3001993 TATTCGGCTTCAACA CCGGGCGCGGC CACC GCCGCGCCCGG ATTATGCGTTTCACC TERM 2342 3002025 - 3002083 + T 95 -20.5 -2.69596 | overlap 3001999 3001993 3002027 3002027 CCACCGCCGCGCCCG GATTATGCGTT-TCACCGCGCCCAGGGCG GAA CGGCCTGGGCGCGGTGCTGACG-ATGATC ATTCCTTCGTTTCGA TERM 2343 3002027 - 3002081 + T 85 -17.3 -2.88425 | overlap 3001993 3002025 3002027 ACCGCCGCGCCCGGA TTATGCGTT-TCACCGCGCCCAGGGCG GAA CGGCCTGGGCGCGGTGCTGACG-ATGA TCATTCCTTCGTTTC Daci_2732 3002357 - 3002082 - | hypothetical protein TERM 2344 3002337 - 3002314 - G 78 -16.7 -3.05384 | opp_overlap 3002314 3002319 TCTCCTTGCAGCGAA GCGCCCCGG TCGAAG CCGGGGCGC TTGCCTTCGGCGTGG TERM 2345 3002314 - 3002337 + g 85 -17.4 -3.17723 | opp_overlap 3002314, overlap 3002319 TCTCCTTGCAGCGAA GCGCCCCGGT CGAA GCCGGGGCGC TTGCCTTCGGCGTGG Daci_2733 3004420 - 3002354 - | nuclease Daci_2734 3005323 - 3004496 - | hypothetical protein Daci_2735 3005848 - 3006111 + | hypothetical protein Daci_2736 3006259 - 3006558 + | hypothetical protein TERM 2346 3006599 - 3006576 - T 72 -13.8 -2.56596 | opp_overlap 3006581, overlap 3006572 TCCGGCATGAAGGGA GCGATCCGGC ACCA GCCGGTTCGC TGCGCGAGAGGGGCG Daci_2737 3006979 - 3006701 - | hypothetical protein TERM 2347 3006840 - 3006821 - G 79 -7.1 -4.46212 | overlap 3006822 GCTGGGACGATAAAA CCCGGTG ACGCGG CACCGGA ACTGTGCGCCAAACT TERM 2348 3007038 - 3007009 - R 72 -13.5 -2.6415 | overlap 3007008 GAAATGATTGAGAAC GCTCAGGAGCGCC TTGC GGCGCCCCAGAAC CAGGTCAGACAACGA Daci_2738 3007393 - 3007043 - | hypothetical protein Daci_2739 3008885 - 3007770 - | hypothetical protein Daci_2740 3011141 - 3008886 - | UBA/THIF-type NAD/FAD binding protein TERM 2349 3009067 - 3009081 + g 72 -8.6 -4.07568 | opp_overlap 3009061 3009060 3009058 CCCAAAGAGGCCGCG TTTGCG GCG CGCAAA TTTTGAACAAGCCCG Daci_2741 3012331 - 3011138 - | hypothetical protein TERM 2350 3012003 - 3012015 + g 81 -3.3 -4.85396 | GGGGACGACCACATC TCGCG GAT CACGA TTTTCTTGTCCTTGT TERM 2351 3012363 - 3012386 + H 85 -2.5 -5.38047 | gap 1 ACGACCGAAGGATGA TCG-CGTATA GTTAA TGTACGACGA TTTTTTATATCCGTC Daci_2742 3012421 - 3013323 + | hypothetical protein Daci_2743 3013330 - 3014118 + | hypothetical protein Daci_2744 3015300 - 3014164 - | hypothetical protein TERM 2352 3014981 - 3014959 - G 78 -16.4 -3.01712 | TGGCTCCGGGGAAGA TTCGCCAGAC ACT GTCTGGCGAA TTGGCCGGGTCAGAA TERM 2353 3015269 - 3015215 - G 70 -15.7 -2.80816 | opp_overlap 3015247 GCGGCATCGAGCAGA TC-CACGATGCCGCCGTGGATGCCGGC GTA GCCGGCAGGCACGGCGGCGG-GTGCGA CTCCCGCCATCGCAG Daci_2745 3016544 - 3015297 - | integrase family protein TERM 2354 3016226 - 3016268 + g 77 -14.9 -3.14132 | AACGGGCGGCGGCCT TGGCCGCGCTGGGGT-CGCCG CCC CGGCGCACCTCGGC-CAGCCA TTCCTGGGCCAGCGA TERM 2355 3016707 - 3016681 - R 100 -15.1 -5.37593 | opp_overlap 3016681 GGTGAAATGAAAAAA GCCCCGTAGCG GCTGG CGCTGCGGGGC TTCGGTGCCGGAGCC TERM 2356 3016681 - 3016707 + r 87 -17.3 -3.05384 | opp_overlap 3016681 GGTGAAATGAAAAAA GCCCCGTAGCG GCTGG CGCTGCGGGGC TTCGGTGCCGGAGCC Daci_2746 3017338 - 3016730 - | hypothetical protein Daci_2747 3017570 - 3019570 + | acetate--CoA ligase TERM 2357 3019596 - 3019613 + F 100 -12.7 -5.4833 | opp_overlap 3019596 GCCCGCCATGAAGAA CCGGAGC ACAG GCTCCGG TTTTTTCTTGGCTGG TERM 2358 3019613 - 3019596 - f 85 -12.7 -3.71848 | opp_overlap 3019596 GCCCGCCATGAAGAA CCGGAGC ACAG GCTCCGG TTTTTTCTTGGCTGG Daci_2748 3019746 - 3020228 + | hypothetical protein TERM 2359 3020268 - 3020289 + T 100 -13.7 -5.26875 | opp_overlap 3020268, overlap 3020281 CGGACCATGAAAAAA CCGCGCGAC TTGC GTTGCGCGG TTTTTTCGTTGCGGG TERM 2360 3020289 - 3020268 - T 100 -11.5 -5.1861 | opp_overlap 3020268 3020281 CGGACCATGAAAAAA CCGCGCGAC TTGC GTTGCGCGG TTTTTTCGTTGCGGG Daci_2749 3020638 - 3020330 - | cytochrome c class I Daci_2750 3020742 - 3020984 + | hypothetical protein Daci_2751 3022428 - 3020986 - | RND efflux system outer membrane lipoprotein TERM 2361 3021166 - 3021187 + g 71 -2.9 -4.56607 | gap 1, overlap 3021168 TTGGGTGCGCGTGAG GTCCAGCGTG GAC CG-GCTGGCC TTTTCTCCTTCCTGC TERM 2362 3022393 - 3022407 + g 74 -12.8 -3.62275 | opp_overlap 3022392 3022390 CAGGCCCAGGAACAG GCGCCG ATG CGGCGC TTTCGGATCATGCGT Daci_2752 3025606 - 3022415 - | CzcA family heavy metal efflux protein Daci_2753 3026867 - 3025617 - | RND family efflux transporter MFP subunit Daci_2754 3028431 - 3026956 - | histidine kinase Daci_2755 3029093 - 3028428 - | two component transcriptional regulator Daci_2756 3029184 - 3031124 + | dihydroxy-acid dehydratase TERM 2363 3031160 - 3031216 + T 100 -20.6 -3.48772 | gap 1, opp_overlap 3031169 3031174, overlap 3031163 3031174 CGGCGGTGCGCACCC GATGAAAATGAAAAGGGATGGAAGGCC TTGC GGCTTTCCATCCCTTTTTCTTTTC-TC TTCTCTCAGGCCCTT TERM 2364 3031163 - 3031214 + T 100 -23.4 -3.31726 | opp_overlap 3031169 3031174, overlap 3031160 3031174 CGGTGCGCACCCGAT GAAAATGAAAAGGGATGGAAGGCC TTGC GGCTTTCCATCCCTTTTTCTTTTC TCTTCTCTCAGGCCC TERM 2365 3031208 - 3031169 - T 89 -16.6 -3.1582 | opp_overlap 3031163 3031160 3031174, overlap 3031174 GCACCCGATGAAAAT GAAAAGGGATGGAAGGCC TTGC GGCTTTCCATCCCTTTTT CTTTTCTCTTCTCTC TERM 2366 3031203 - 3031174 - T 100 -16.5 -4.70319 | opp_overlap 3031163 3031160 3031174, overlap 3031169 CGATGAAAATGAAAA GGGATGGAAGGCC TTGC GGCTTTCCATCCC TTTTTCTTTTCTCTT TERM 2367 3031174 - 3031203 + T 100 -18.7 -5.60556 | opp_overlap 3031174 3031169, overlap 3031163 3031160 CGATGAAAATGAAAA GGGATGGAAGGCC TTGC GGCTTTCCATCCC TTTTTCTTTTCTCTT TERM 2368 3031374 - 3031362 - T 76 -5.5 -4.58283 | overlap 3031363 GAAGTGCCTGAAAAA CTGGC GCG GCCAA AACAAGGGACAGCGA Daci_2757 3031954 - 3031478 - | bacterioferritin TERM 2369 3032061 - 3032017 - H 74 -11.4 -3.53012 | gap 1, overlap 3031991 GGCCCTCGGGCCAAA GCGCGCGC-TGCAATTCCCCG TGGA CGGCGCATTGCATGCATGCGC GACGCAGAAGCATTC TERM 2370 3032765 - 3032744 - g 72 -13.7 -3.21276 | overlap 3032742 TGCTGGGCGAGAACA TCGACGGCC GCAC GGCCGCCGA GTGGGGCCTGGTCAA Daci_2758 3032218 - 3033057 + | p-hydroxycinnamoyl CoA hydratase/lyase Daci_2759 3033128 - 3035317 + | CoA-binding domain-containing protein TERM 2371 3035329 - 3035351 + F 100 -18.4 -4.25104 | CTGATGATCGCGCAA GGGCTGGCGC GGT GCGCCGGCCC TTTTCATGCGCAGCC TERM 2372 3036476 - 3036500 + G 82 -6.3 -4.72986 | overlap 3036477 3036478 TTCGCCCACCGTGGC CCTGGTGGCCG TGG CGGTCACCACC TTTTTCCTGGGCATG Daci_2760 3035424 - 3036794 + | major facilitator transporter TERM 2373 3038546 - 3038596 + G 75 -5.9 -4.46212 | gap 2, overlap 3038543 CGCCGCACCGAGTCC GCCGCCCGCACGCCGCTGCCGGCCG CCG TGGCCTG-AGCGGGCAGCCGG-GGC TTTTATGATGGAACG Daci_2761 3036791 - 3038581 + | acyl-CoA dehydrogenase domain-containing protein TERM 2374 3038611 - 3038649 + G 88 -15.3 -3.67792 | gap 1, opp_overlap 3038610, overlap 3038636 3038636 3038638 CTTTTATGATGGAAC GCCGCACCGGC-CCTG AAGATCCG CAGGCGCCGGGGCGGC TTTGCCTCGGTGTGC Daci_2762 3038601 - 3039155 + | MarR family transcriptional regulator Daci_2763 3039199 - 3040062 + | prolipoprotein diacylglyceryl transferase TERM 2375 3040088 - 3040104 + F 100 -10.8 -5.60993 | opp_overlap 3040088 ACGCACGGATACGAA GCGGGC CTGGT GCCCGC TTTTTTTGTGCAAGG TERM 2376 3040717 - 3040752 + G 73 -12.4 -3.53012 | overlap 3040684 ATGGACCTGCGCCGC GCGCTGATGTCGCCGC GCAC GCGGCTGCTGCAGCGC TTTGCCCAGCCCCAG TERM 2377 3040756 - 3040779 + G 72 -8.8 -3.96624 | gap 1 CTGCTGCAGCGCTTT GCCCA-GCCCC AGG GCGGCATGGGC TTTCTGGTGGACCTG Daci_2764 3040291 - 3041736 + | malonyl-CoA decarboxylase TERM 2378 3041779 - 3041722 - f 100 -23 -3.12351 | gap 2, opp_overlap 3041740, overlap 3041734 3041740 TCCTCGGACATCGAA GCCCTGTGCAAATGAAAAGGGGCGCGGC GCAG GCCGTGCCCCTTTTC-TT-GCACAGGGA CTGCTGCGCCTGACA TERM 2379 3041769 - 3041734 - f 100 -17.6 -3.53761 | opp_overlap 3041740, overlap 3041722 3041740 GAAGCCCTGTGCAAA TGAAAAGGGGCGCGGC GCAG GCCGTGCCCCTTTTCT TGCACAGGGACTGCT TERM 2380 3041763 - 3041740 - f 100 -15.2 -4.54727 | opp_overlap 3041740, overlap 3041734 3041722 CTGTGCAAATGAAAA GGGGCGCGGC GCAG GCCGTGCCCC TTTTCTTGCACAGGG TERM 2381 3041740 - 3041763 + F 100 -17.4 -4.63218 | opp_overlap 3041740 3041734 3041722 CTGTGCAAATGAAAA GGGGCGCGGC GCAG GCCGTGCCCC TTTTCTTGCACAGGG TERM 2382 3041972 - 3042006 + G 74 -14.3 -3.29461 | gap 1, overlap 3041983 TGGTCGTGCCGTTTC CGGCCG-GCGGGGGCA CCGA TGCCTTTGCCCGGCCG TTCTCGGCCCAGTTC Daci_2765 3041833 - 3042831 + | hypothetical protein TERM 2383 3042861 - 3042914 + F 100 -21.7 -3.06915 | GTCAGGGCAGGGGCA GGGCAGGGACAGGGCGGTGGCATGC GCGT GCATGTCACCACCCTGTCACGGGCC TTGGCTACGGTCCAT Daci_2766 3042959 - 3044113 + | hypothetical protein Daci_2767 3044821 - 3044126 - | GntR family transcriptional regulator Daci_2768 3044882 - 3045631 + | enoyl-CoA hydratase/isomerase TERM 2384 3046143 - 3046121 - g 72 -13.4 -3.21395 | opp_overlap 3046120 3046119, overlap 3046119 AGCTGCTCTACAAGA GCGCGCGC TATGACG GCGCGCGC AATTTCACGGGCATC Daci_2769 3045814 - 3046782 + | hypothetical protein Daci_2770 3046901 - 3048133 + | L-carnitine dehydratase/bile acid-inducible protein F Daci_2771 3048120 - 3049730 + | malonyl-CoA synthase TERM 2385 3049805 - 3049775 - T 93 -17 -3.39216 | opp_overlap 3049780, overlap 3049780 GCCTGATTGAAAAAG CAAAAGGCATCGGC GCC GCCGATGCCTTTTT TTGTGTGGCGGCCGC TERM 2386 3049780 - 3049800 + T 100 -16.9 -5.71712 | opp_overlap 3049775 3049780 ATTGAAAAAGCAAAA GGCATCGGC GCC GCCGATGCC TTTTTTTGTGTGGCG TERM 2387 3049800 - 3049780 - T 100 -16.9 -4.78661 | opp_overlap 3049780, overlap 3049775 ATTGAAAAAGCAAAA GGCATCGGC GCC GCCGATGCC TTTTTTTGTGTGGCG Daci_2772 3050282 - 3049839 - | UspA domain-containing protein TERM 2388 3050847 - 3050863 + G 73 -7.9 -4.21194 | GCCGTGCACTGTGGC GCTGGCT GGT GGCCGGC TTTTGCATGATGCAG Daci_2773 3050357 - 3052831 + | heavy metal translocating P-type ATPase Daci_2774 3052972 - 3053139 + | cytochrome oxidase maturation protein, cbb3-type Daci_2775 3053203 - 3054639 + | cytochrome c oxidase, cbb3-type, subunit I Daci_2776 3054659 - 3055291 + | cytochrome c oxidase, cbb3-type, subunit II Daci_2777 3055303 - 3055440 + | Cbb3-type cytochrome oxidase component Daci_2778 3055468 - 3056385 + | cytochrome c oxidase, cbb3-type, subunit III TERM 2389 3056386 - 3056419 + F 89 -16.7 -3.24879 | opp_overlap 3056386, overlap 3056393 GCAGTCCGTCAGTAA GCACAGGGGCGGCGC TGCG GCGCCGCCTTTTTGC GTTTTGAGTTTTCAG TERM 2390 3056419 - 3056386 - f 74 -12.3 -3.14564 | opp_overlap 3056386 3056393 GCAGTCCGTCAGTAA GCACAGGGGCGGCGC TGCG GCGCCGCCTTTTTGC GTTTTGAGTTTTCAG TERM 2391 3056393 - 3056412 + F 100 -16.4 -4.87318 | opp_overlap 3056386, overlap 3056386 GTCAGTAAGCACAGG GGCGGCGC TGCG GCGCCGCC TTTTTGCGTTTTGAG Daci_2779 3056463 - 3057917 + | cytochrome c oxidase accessory protein CcoG Daci_2780 3057975 - 3058289 + | hypothetical protein TERM 2392 3058311 - 3058326 + F 95 -11.8 -4.65895 | opp_overlap 3058311 TGCACCCCTGCAAGA GGCCGC AGTC GCGGCC TTTTTGCATGGCGGA Daci_2781 3058469 - 3058762 + | hypothetical protein TERM 2393 3058807 - 3058784 - T 95 -18.2 -3.33696 | opp_overlap 3058784 3058787, overlap 3058787 GCCCGCCGCAATGAA CAAGGCCCGC TGTC GCGGGCCTTG TTCATTGGCGGATGA TERM 2394 3058784 - 3058807 + T 95 -18.2 -3.34344 | opp_overlap 3058784 3058787, overlap 3058787 GCCCGCCGCAATGAA CAAGGCCCGC TGTC GCGGGCCTTG TTCATTGGCGGATGA TERM 2395 3058804 - 3058787 - T 91 -14.1 -3.81146 | opp_overlap 3058784 3058787, overlap 3058784 CGCCGCAATGAACAA GGCCCGC TGTC GCGGGCC TTGTTCATTGGCGGA TERM 2396 3058787 - 3058804 + T 91 -14.1 -3.81146 | opp_overlap 3058787 3058784, overlap 3058784 CGCCGCAATGAACAA GGCCCGC TGTC GCGGGCC TTGTTCATTGGCGGA Daci_2782 3059632 - 3058844 - | Crp/FNR family transcriptional regulator Daci_2783 3059726 - 3061108 + | coproporphyrinogen III oxidase TERM 2397 3061148 - 3061169 + G 72 -13.7 -3.1875 | GGACTGCTTTGATCA TGGGGCTCG TCGG CGGGCCCCA TTGCCTTGCCATGTG TERM 2398 3061588 - 3061646 + G 78 -17.2 -2.75844 | overlap 3061596 GGACTGCTGTATTCG GCCGTGCTGGTCGCCGCGCTCAGCGGCG GCC CGTTGCAGGGCGCGCTGGCCATGGCGGC CTTTGGCGTGGGCAG TERM 2399 3061596 - 3061647 + G 74 -12.8 -3.59979 | gap 1, overlap 3061588 GTATTCGGCCGTGCT GGTCGCCGCGCTCAGCGGCGGCCCG TTG CAGGGCG-CGCTGGCCATGGCGGCC TTTGGCGTGGGCAGC Daci_2784 3061114 - 3061830 + | hypothetical protein TERM 2400 3062163 - 3062138 - g 72 -6.2 -4.36914 | GTGTCCCGCACAAAA GCGACACCT-GG CCCG CCGAGGTG-CGC ACCCCGCCGCCGCAG Daci_2785 3061900 - 3063246 + | metal dependent phosphohydrolase TERM 2401 3063921 - 3063941 + G 78 -6.7 -4.54727 | overlap 3063924 CCCCAGCTGCGCCGG GGCCTGCCC ATG GGGCGGATC TTTTCCTTTCGCGAC Daci_2786 3063243 - 3065729 + | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) Daci_2787 3066511 - 3065693 - | hypothetical protein TERM 2402 3066431 - 3066413 - G 70 -8.8 -3.91032 | GAAGTAGGTCAGAAA CGGCACGA GCA CCATGCCG CCGCCCACTCCCAGC TERM 2403 3066588 - 3066562 - R 100 -20.9 -5.46657 | GAGGGCAACAAAAAA CCCGGCGCACC GTGGA GGTGCGCCGGG TTGGAATCAGGTGTC TERM 2404 3066860 - 3066877 + r 72 -12.7 -3.05384 | opp_overlap 3066860 CGATGCCATGAAAAA CGGCCTC CGAA GAGGCCG TTGGATGGACGGGAG TERM 2405 3066877 - 3066860 - R 100 -12.7 -4.7373 | opp_overlap 3066860 CGATGCCATGAAAAA CGGCCTC CGAA GAGGCCG TTGGATGGACGGGAG Daci_2788 3067303 - 3066902 - | hypothetical protein Daci_2789 3067546 - 3067337 - | hypothetical protein TERM 2406 3068230 - 3068269 + G 95 -18.6 -3.54424 | GCGGCTGGGCCTGCC GGTGCTGGCCGTGATCGA CGCC TCGGGCATGGCCGGCACC TTTGGCGCGCTGGCC Daci_2790 3067736 - 3069274 + | glutamine amidotransferase Daci_2791 3069271 - 3069864 + | cobalbumin biosynthesis protein Daci_2792 3069861 - 3070739 + | periplasmic binding protein Daci_2793 3070781 - 3071764 + | transport system permease protein Daci_2794 3071761 - 3072564 + | ABC transporter related Daci_2795 3072581 - 3073378 + | 3''-kinase Daci_2796 3074253 - 3073375 - | RpiR family transcriptional regulator TERM 2407 3074969 - 3074953 - g 72 -13.7 -3.20345 | overlap 3074951 AACCCCAGAGCAATA CGGCCAG CGC CTGGCCG ACGAGCTGGATGCGG Daci_2797 3074414 - 3075757 + | hypothetical protein Daci_2798 3075829 - 3076746 + | extracellular solute-binding protein Daci_2799 3076872 - 3077117 + | antitoxin Daci_2800 3077114 - 3077551 + | PilT domain-containing protein Daci_2801 3077581 - 3078237 + | Asp/Glu racemase TERM 2408 3078281 - 3078239 - f 74 -11.2 -3.53012 | gap 1, opp_overlap 3078239, overlap 3078240 TCCGCCTCGGTTAAA GTGGCGCTCCGCTGCGGCG CATGCC CGCCGCAGCGC-GTGCAAC TTTTGAGGATGACAG TERM 2409 3078239 - 3078281 + F 95 -13.4 -4.11216 | gap 1, opp_overlap 3078239 3078240 TCCGCCTCGGTTAAA GTGGCGCTCCGCTGCGGCG CATGCC CGCCGCAGCGC-GTGCAAC TTTTGAGGATGACAG Daci_2802 3078301 - 3078870 + | cob(I)alamin adenosyltransferase Daci_2803 3078910 - 3079617 + | cob(II)yrinic acid a,c-diamide reductase TERM 2410 3080012 - 3080025 + G 70 -3.7 -4.46212 | overlap 3080007 CCTGGTGCTGGGCGT GCTGC TCAA GCCGC TTTTGTCCTGGCGCA Daci_2804 3079614 - 3080708 + | cobalamin biosynthesis protein CobD Daci_2805 3080705 - 3081748 + | aminotransferase class I and II Daci_2806 3081735 - 3083240 + | cobyric acid synthase CobQ Daci_2807 3083384 - 3083815 + | hypothetical protein TERM 2411 3083845 - 3083869 + F 100 -11.4 -5.60993 | opp_overlap 3083845 GTTCACCTGAGAAAA CCCGCCGG GCCACGAAG CCGGCGGG TTTTTTTGTGGGCGA TERM 2412 3083869 - 3083845 - f 93 -11.4 -4.4009 | gap 1, opp_overlap 3083845 GTTCACCTGAGAAAA CCCGCCGGGCC ACGA AGCC-GGCGGG TTTTTTTGTGGGCGA Daci_2808 3084101 - 3084472 + | hypothetical protein Daci_2809 3085359 - 3084562 - | hydroxypyruvate isomerase TERM 2413 3084920 - 3084904 - G 74 -10.8 -3.71848 | opp_overlap 3084902 GCGGCTCAGGAAGAA GCCGGG CATGT CCCGGC CGTTGATGGGCTCCA Daci_2810 3086678 - 3085395 - | type III effector Hrp-dependent outers Daci_2811 3087619 - 3086675 - | 3-hydroxyisobutyrate dehydrogenase Daci_2812 3088596 - 3087616 - | NAD-dependent epimerase/dehydratase Daci_2813 3089971 - 3088640 - | major facilitator transporter Daci_2814 3090724 - 3090086 - | putative aldolase TERM 2414 3090856 - 3090836 - R 95 -12.6 -4.2573 | opp_overlap 3090835, overlap 3090825 CAAACAAGGTGAAAA CCCTTGGC CATGC GCCAAGGG GTGGCTTCGGAGGTT Daci_2815 3091665 - 3090871 - | GntR domain-containing protein TERM 2415 3092355 - 3092300 - g 76 -13.8 -3.41051 | gap 1 GGACCCCGACGACAA GC-TTCCCCAGCCCGGCCAGCCGCGCC TGT GGCGCCGCAAGCTGGGCTATGGCACGC GCGACTGCAGCCAGG Daci_2816 3091758 - 3093002 + | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase Daci_2817 3094486 - 3093023 - | transcriptional regulator Daci_2818 3094592 - 3095338 + | GCN5-related N-acetyltransferase Daci_2819 3096228 - 3095314 - | LysR family transcriptional regulator Daci_2820 3096291 - 3097370 + | hypothetical protein Daci_2821 3098267 - 3097380 - | LuxR family transcriptional regulator Daci_2822 3098374 - 3098862 + | hypothetical protein TERM 2416 3099184 - 3099146 - g 82 -13.8 -3.78934 | gap 1 GGTCGTGGACAACAA GCCG-GGCGCTGGCGGC CTCATC GCCGCCAGCGAGGCGGC ACGGGCCGTGCCTGA Daci_2823 3098910 - 3099917 + | hypothetical protein Daci_2824 3100673 - 3099921 - | endonuclease III TERM 2417 3100047 - 3100080 + g 72 -13.7 -3.16881 | CAGGATGAGCCAGTG GTGCGAGTCCACGGC ATAG GCCGGGGGCACGCGC TTCATCAACTGCATC Daci_2825 3100808 - 3101881 + | hypothetical protein Daci_2826 3102855 - 3101947 - | LysR family transcriptional regulator Daci_2827 3102971 - 3104458 + | amidase Daci_2828 3104518 - 3105504 + | hypothetical protein TERM 2418 3106688 - 3106709 + G 70 -8.7 -3.86897 | gap 1 TGAGTTGGCCAAGCG GGCCATTGCC CAG GGC-GTGGCC TTTGTGCCGGGTGCG Daci_2829 3105642 - 3106838 + | GntR family transcriptional regulator Daci_2830 3106835 - 3107092 + | SlyX family protein TERM 2419 3107117 - 3107142 + T 100 -14.1 -4.3255 | gap 1 GCTGCTGCGTGCGAA TGCCCAGGCCAG CCC CTG-CCTGGGCA TTTCTTCATTCAAGC Daci_2831 3107282 - 3107148 - | hypothetical protein Daci_2832 3108918 - 3107491 - | amidohydrolase Daci_2833 3109943 - 3108915 - | hypothetical protein TERM 2420 3110798 - 3110830 + G 72 -8.3 -4.07568 | opp_overlap 3110816 CCGGCGCGCGCTGGG TGCTGCCCACGGCCA ACA TCGCCGTGCGCGGGA TTTTCGAGGCCGAGG Daci_2834 3110134 - 3111123 + | LysR family transcriptional regulator Daci_2835 3111240 - 3111788 + | hypothetical protein Daci_2836 3112743 - 3111838 - | chromosome replication initiation inhibitor protein TERM 2421 3112104 - 3112078 - G 82 -10.7 -4.20516 | GTTGGAGGGAAGAAA GTGGCGCGGCG TGTTG CGCCGCCCCTC TGCGCCCAGGCGTTG TERM 2422 3112470 - 3112516 + g 90 -13.6 -4.07568 | TGAGCGTGGGCAGGG CGGTCTGCCCCTCGGGGACCAG CTC CGGGTTCTTGCGGCGCAGATCG TTTTCGAGCAGGGCC Daci_2837 3112814 - 3113464 + | lysine exporter protein LysE/YggA Daci_2838 3113785 - 3113474 - | hypothetical protein Daci_2839 3114394 - 3113816 - | AsnC family transcriptional regulator Daci_2840 3114421 - 3115323 + | hypothetical protein TERM 2423 3115355 - 3115372 + T 100 -12.7 -5.40072 | opp_overlap 3115355 AGGGGAATGAAGAAA GCGCTGC CGAG GCAGCGC TTTTTTTGCGGGGAC TERM 2424 3115372 - 3115355 - T 100 -12.7 -4.32951 | opp_overlap 3115355 AGGGGAATGAAGAAA GCGCTGC CGAG GCAGCGC TTTTTTTGCGGGGAC Daci_2841 3116206 - 3115421 - | YaeC family lipoprotein Daci_2842 3116331 - 3116621 + | hypothetical protein Daci_2843 3118000 - 3116660 - | transcriptional regulator Daci_2844 3118103 - 3118588 + | thioesterase superfamily protein TERM 2425 3118636 - 3118610 - T 100 -12.3 -5.60993 | opp_overlap 3118614, overlap 3118614 CGCTGGACAAAAAAA GAAAGGCCGCG ACAGG CGCGGCCTTTT GCAAGGAGCAGGCGG TERM 2426 3118614 - 3118632 + T 89 -13.1 -4.07568 | opp_overlap 3118614 3118610 GGACAAAAAAAGAAA GGCCGCG ACAGG CGCGGCC TTTTGCAAGGAGCAG TERM 2427 3118632 - 3118614 - T 100 -13.1 -5.27709 | opp_overlap 3118614, overlap 3118610 GGACAAAAAAAGAAA GGCCGCG ACAGG CGCGGCC TTTTGCAAGGAGCAG Daci_2845 3119441 - 3118653 - | hypothetical protein TERM 2428 3119231 - 3119267 + g 78 -14.4 -3.59698 | gap 1, overlap 3119232 CCGCGCCGGTCGGCG CGCCACAGG-CTGCCCG TATG CGGGCAGGCCTGCGGCC TTGTGTGTCACATGG TERM 2429 3119232 - 3119266 + g 78 -17.9 -2.75498 | gap 1, overlap 3119231 CGCGCCGGTCGGCGC GCCACAGG-CTGCCCG TATG CGGGCAGGCCTGCGGC CTTGTGTGTCACATG TERM 2430 3119438 - 3119405 - G 70 -3.8 -4.41206 | gap 1, opp_overlap 3119405, overlap 3119407 AAGCATTGTAGAAAA GACTG-GGGCTTGCC GGAAA AGCAAGCCCACAGAA CATTCTCAGCTATTG TERM 2431 3119436 - 3119407 - G 74 -10.8 -3.80877 | gap 1, opp_overlap 3119405, overlap 3119405 GCATTGTAGAAAAGA CTG-GGGCTTGCC GGAAA AGCAAGCCCACAG AACATTCTCAGCTAT TERM 2432 3119458 - 3119496 + r 76 -9.6 -4.07568 | gap 3 CTCAGCTATTGATTG CGGAGCGGCA-CAGCG-GC CTGC GCGCGCCGCTGCCGC-CCG TTTTCAGCGCAGGAC Daci_2846 3120213 - 3119500 - | phosphoserine phosphatase SerB Daci_2847 3120958 - 3120293 - | hypothetical protein Daci_2848 3124470 - 3120976 - | transcription-repair coupling factor TERM 2433 3122731 - 3122784 + g 72 -3.6 -4.60041 | gap 1, overlap 3122736 3122763 GCGGCGCGCATAGAT GTTCAGCAGCTCGGCTGCCGAGTCG CGCAC CTGCTCGGCCGCCTTGC-GCTTGGC TTTTTCCCACTGCGT TERM 2434 3124540 - 3124519 - H 95 -11.5 -4.58213 | GAAGTAACGACAAAA CCCCTCGGC ACGC GCAGAGGGG TATCGAACCATTTTA Daci_2849 3124566 - 3125462 + | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase TERM 2435 3125443 - 3125453 + F 78 -4.6 -4.84359 | ACCAGCCGCAGGCGT CGGG CAA TCCG TTTTTCTGAACCTGG Daci_2850 3125470 - 3125958 + | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase TERM 2436 3126018 - 3125986 - T 100 -26.4 -4.18494 | opp_overlap 3125986 CATCCCCATGCAAAA GGCCCCGGCGATCG GTCAA CGATCGCCGGGGCC TTTGTATTTGCCGAA TERM 2437 3125986 - 3126018 + T 100 -26.4 -4.32857 | opp_overlap 3125986 CATCCCCATGCAAAA GGCCCCGGCGATCG GTCAA CGATCGCCGGGGCC TTTGTATTTGCCGAA Daci_2851 3127563 - 3126061 - | histidine kinase Daci_2852 3128538 - 3127807 - | osmolarity response regulator Daci_2853 3128727 - 3129596 + | hypothetical protein TERM 2438 3129621 - 3129638 + T 100 -12.7 -5.03715 | opp_overlap 3129621 CCATCCATGAAAAAA GGAGCGC CGTG GCGCTCC TTTTTTGGCAGTGGT TERM 2439 3129638 - 3129621 - T 100 -12.7 -5.1675 | opp_overlap 3129621 CCATCCATGAAAAAA GGAGCGC CGTG GCGCTCC TTTTTTGGCAGTGGT Daci_2854 3130463 - 3129669 - | 3-hydroxybutyrate dehydrogenase TERM 2440 3131183 - 3131199 + G 88 -15.1 -3.71686 | ACCTATGATGCGCCC GGCCGCC GAT GGCGGCC TTGTCTTGCATTACG TERM 2441 3131434 - 3131468 + G 78 -12.1 -3.78934 | overlap 3131435 GGCATGCGCCCACCT TCGTCGCAGCAGGGC AGGTG GCCTTGCTGTGCCGG TTCTTATGGGGAGAA Daci_2855 3130533 - 3131540 + | alpha/beta hydrolase fold TERM 2442 3132262 - 3132250 - g 72 -6.2 -4.25104 | overlap 3132251 CCTGCTCGATGAAAA GCGC GTGGA GCGC GAAGCCTACATGGAG Daci_2856 3131537 - 3133786 + | (p)ppGpp synthetase I, SpoT/RelA TERM 2443 3133960 - 3133981 + F 100 -13.1 -5.72622 | opp_overlap 3133960 GATGGAATGCAAAAA GCCTTCTGA TCAC TCAGAAGGC TTTTTTGTTTGTGCG TERM 2444 3133981 - 3133960 - f 100 -13.1 -4.75174 | opp_overlap 3133960 GATGGAATGCAAAAA GCCTTCTGA TCAC TCAGAAGGC TTTTTTGTTTGTGCG Daci_2857 3134061 - 3134234 + | hypothetical protein Daci_2858 3134277 - 3134474 + | hypothetical protein Daci_2859 3135015 - 3134485 - | GCN5-related N-acetyltransferase Daci_2860 3135700 - 3135020 - | TetR family transcriptional regulator TERM 2445 3135784 - 3135799 + H 75 -2.6 -5.00884 | GACTTTCTGGGTGAT TTTACT GATT GGTAAA TTTTTTCACCCGCGT Daci_2861 3136025 - 3137392 + | putative oxidoreductase Daci_2862 3137427 - 3138746 + | dihydropyrimidine dehydrogenase Daci_2863 3138879 - 3140372 + | NCS1 nucleoside transporter Daci_2864 3140403 - 3141863 + | dihydropyrimidinase Daci_2865 3141888 - 3143153 + | amidase TERM 2446 3143333 - 3143349 + F 100 -12.3 -5.75342 | opp_overlap 3143333 AGGGGCTGCAGAAAA TCCCGCT TCA AGCGGGA TTTTTTTTGCCCGGA TERM 2447 3143349 - 3143333 - f 100 -12.3 -4.37092 | opp_overlap 3143333 AGGGGCTGCAGAAAA TCCCGCT TCA AGCGGGA TTTTTTTTGCCCGGA Daci_2866 3143514 - 3144053 + | polyhydroxyalkonate synthesis repressor, PhaR Daci_2867 3144119 - 3145534 + | MiaB-like tRNA modifying enzyme YliG TERM 2448 3145582 - 3145559 - f 100 -18.2 -4.09685 | opp_overlap 3145559 TCGCATCCCTGAAAA GCGGGCAAGG TTTT CCTTGCCCGC TTTTTTTGTCCTTGA TERM 2449 3145559 - 3145582 + F 100 -18.2 -5.71983 | opp_overlap 3145559 TCGCATCCCTGAAAA GCGGGCAAGG TTTT CCTTGCCCGC TTTTTTTGTCCTTGA Daci_2868 3145685 - 3146713 + | alcohol dehydrogenase TERM 2450 3146758 - 3146737 - T 100 -14.5 -5.78622 | opp_overlap 3146737 CCACTCCAAAAAAAA CAGGCTTCC CTCG GGAAGCCTG TTTTGCATGGCGCAC TERM 2451 3146737 - 3146758 + T 100 -14.5 -4.18018 | opp_overlap 3146737 CCACTCCAAAAAAAA CAGGCTTCC CTCG GGAAGCCTG TTTTGCATGGCGCAC Daci_2869 3148195 - 3146777 - | MATE efflux family protein TERM 2452 3147992 - 3147977 - G 77 -11.8 -3.94634 | CATCACCGGAAAGAA GGCCGC GACG GCGGCC AGCGCCTGCACGCCC Daci_2870 3148870 - 3148250 - | hypothetical protein TERM 2453 3148980 - 3148956 - R 100 -21.5 -5.45802 | opp_overlap 3148979 CGCCCAAAAGAAAAA GCCCCTGGCAG AGG CTGCCAGGGGC TTCGCAGAGGGAACT Daci_2871 3149561 - 3149007 - | elongation factor P Daci_2872 3150857 - 3149724 - | hypothetical protein TERM 2454 3150379 - 3150337 - G 100 -15.5 -4.4078 | gap 1 CCCTCGGAAGCAAAA GCTGCCTGGCGCGCG-GCCA GTTC CGGCTCGCGCAGCAGGCCGC CTGTGGCGGCCGTGA TERM 2455 3150591 - 3150546 - G 73 -10.3 -3.86015 | gap 1 GATGGCCGCCAGAAA GGGCGGCGGGATC-TCGCAGCC GAA GGCCTCGATGACCACATCGCCC ACGGTCTGCGGGACA Daci_2873 3151747 - 3150863 - | LysR family transcriptional regulator TERM 2456 3151462 - 3151430 - G 81 -12.8 -3.89346 | gap 1, overlap 3151431 CTGCGAGGGCAGAAA CTGCGTGATGGCCGA GATG TTGGCCATCACGC-G CACATGGCCGCGCAG Daci_2874 3151916 - 3153133 + | L-carnitine dehydratase/bile acid-inducible protein F TERM 2457 3153165 - 3153178 + G 86 -9.5 -4.63218 | overlap 3153162 GGATGTCTGGCAGGG CGCGG GCCG CCGCG TTTTCTTCAACGAGG TERM 2458 3154042 - 3154080 + G 74 -13 -3.54424 | opp_overlap 3154022 AGCCAGATCGCCAAG GCCGGCGCGCGGCTGG ACCTGCA CCAGCCGCCAGCCGAC TTTGCAGCCATCCGC Daci_2875 3153130 - 3154119 + | pyruvate carboxyltransferase TERM 2459 3155055 - 3155037 - g 72 -4.5 -4.4078 | overlap 3155019 3155039 GGCCTTCAAGCAAAA GGCGC AGGAGCAGG GCGCC ACGGCGGACTACATG Daci_2876 3154171 - 3155157 + | hypothetical protein TERM 2460 3155197 - 3155160 - f 82 -14.8 -3.14051 | gap 1, overlap 3155158 CGAGGCCGAGTAAGA GCCCGGGGGC-CCGCAG GCCCG CTGCGGCGGGCCCGGGC AGCGGCCACAATAGG TERM 2461 3156526 - 3156550 + G 82 -17.9 -3.05384 | overlap 3156528 GCACACGGCGGGCGA GGCCACGCAGG CCT CCTGCGTGGTC TTCCATCACCACAAG TERM 2462 3156528 - 3156548 + G 78 -16.9 -3.08679 | overlap 3156526 ACACGGCGGGCGAGG CCACGCAGG CCT CCTGCGTGG TCTTCCATCACCACA Daci_2877 3155216 - 3157168 + | excinuclease ABC, C subunit TERM 2463 3157806 - 3157780 - g 72 -3.4 -4.60487 | overlap 3157781 3157782 TACTACCTGCAAAAA GCCCTGCCCGAG ATC CGCGCGCGGGTC ACGCACTGAGGGCCT Daci_2878 3157237 - 3157815 + | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase TERM 2464 3157841 - 3157874 + F 74 -6.7 -4.34482 | gap 1, overlap 3157845 3157866 GGCCGTTCCCGGGAT CCTGCGCCAGACACGT CGA AC-TGTCTGGCGTTGC TATTTTTTTGGAAGC TERM 2465 3157845 - 3157870 + F 85 -12.7 -3.71915 | gap 1, overlap 3157841 3157866 GTTCCCGGGATCCTG CGCCAGACACGT CGA AC-TGTCTGGCG TTGCTATTTTTTTGG TERM 2466 3157866 - 3157876 + F 85 -3.2 -5.40474 | overlap 3157845 3157841 ACACGTCGAACTGTC TGGC GTT GCTA TTTTTTTGGAAGCAT TERM 2467 3158383 - 3158371 - g 75 -5.5 -4.63486 | AGGCTGTGAAGAAAA CCCTC AAA AAGGG TGGTACAGTGTCGCT Daci_2879 3158268 - 3158540 + | histone family protein DNA-binding protein TERM 2468 3158635 - 3158662 + F 74 -11.4 -3.55191 | opp_overlap 3158635 3158640, overlap 3158640 AGCACCCACCAAGAA CAAAAGGCGAAC GAAA GTTCGCCTTTTC TATTTCTGCCATTGA TERM 2469 3158662 - 3158635 - f 80 -11.4 -3.73914 | opp_overlap 3158635 3158640, overlap 3158640 AGCACCCACCAAGAA CAAAAGGCGAAC GAAA GTTCGCCTTTTC TATTTCTGCCATTGA TERM 2470 3158657 - 3158640 - f 100 -11.3 -4.92757 | opp_overlap 3158635 3158640, overlap 3158635 CCACCAAGAACAAAA GGCGAAC GAAA GTTCGCC TTTTCTATTTCTGCC TERM 2471 3158640 - 3158657 + F 100 -11.3 -4.84918 | opp_overlap 3158640 3158635, overlap 3158635 CCACCAAGAACAAAA GGCGAAC GAAA GTTCGCC TTTTCTATTTCTGCC Daci_2880 3158691 - 3160586 + | PpiC-type peptidyl-prolyl cis-trans isomerase TERM 2472 3160772 - 3160747 - f 100 -11.9 -5.95539 | opp_overlap 3160747 CCCCAAATAAAAAAA TCCCCAGAGCA GAAA TGCTTTGGGGA TTTTTGCTTTGGGCG TERM 2473 3160747 - 3160772 + F 100 -14.1 -4.98531 | opp_overlap 3160747 CCCCAAATAAAAAAA TCCCCAGAGCA GAAA TGCTTTGGGGA TTTTTGCTTTGGGCG TERM 2474 3160850 - 3160903 + F 71 -6.7 -4.2461 | opp_overlap 3160815 GTCCCTGCCGGCTGC GGCTGCAT-GGAGGATGGTGGCATC CTGCCC GTTGCCCGCATCCCCCGATGC-GCC TTTGTTCCTGCCGCT TERM 2475 3161109 - 3161074 - f 100 -17.8 -3.94188 | opp_overlap 3161079 3161105, overlap 3161079 AGCCACCCCAAACAA GAAAATCCCCAGTGCA GGAA TGCACTGGGGATTTTT GCTTTGGGCGAAAAC TERM 2476 3161079 - 3161104 + F 100 -17.7 -4.98531 | opp_overlap 3161079 3161074 CCCCAAACAAGAAAA TCCCCAGTGCA GGAA TGCACTGGGGA TTTTTGCTTTGGGCG TERM 2477 3161104 - 3161079 - f 100 -17.7 -5.00196 | opp_overlap 3161079, overlap 3161074 CCCCAAACAAGAAAA TCCCCAGTGCA GGAA TGCACTGGGGA TTTTTGCTTTGGGCG Daci_2881 3161417 - 3162031 + | Tfp pilus assembly protein FimT-like protein Daci_2882 3162031 - 3162576 + | type IV pilus modification protein PilV TERM 2478 3163093 - 3163125 + G 74 -12 -3.66356 | gap 1 GGCCGCGCAGGAGGT TGTGCCGCTCGC-CG ATGG CGTGCGGGCGGTGCA TTTCGAGTTCGGCAT Daci_2883 3162605 - 3163399 + | Tfp pilus assembly protein PilW-like protein Daci_2884 3163432 - 3163989 + | type 4 fimbrial biogenesis protein PilX TERM 2479 3164989 - 3164974 - g 83 -5.4 -4.91109 | gap 1, overlap 3164977 CTCGTACGAGAAAAA CATCGCC GGC GGCG-TG CTGCGTCGCAATATC TERM 2480 3167594 - 3167578 - g 72 -3.5 -4.56597 | GCCTGCGCCGAAAAA CGGCCTG TCG CGTGCCG CCGTGGTGGACAACA Daci_2885 3164009 - 3168490 + | fimbrial assembly protein Daci_2886 3168487 - 3168999 + | Tfp pilus assembly protein PilE-like protein Daci_2887 3169794 - 3169105 - | isochorismatase hydrolase Daci_2888 3170431 - 3169805 - | isochorismatase hydrolase Daci_2889 3170564 - 3171466 + | LysR family transcriptional regulator Daci_2890 3172050 - 3171550 - | hypothetical protein Daci_2891 3173285 - 3172047 - | hypothetical protein Daci_2892 3174486 - 3173287 - | cytochrome-c peroxidase Daci_2893 3175514 - 3174486 - | hypothetical protein Daci_2894 3176056 - 3175571 - | hypothetical protein Daci_2895 3176534 - 3176067 - | hypothetical protein Daci_2896 3178683 - 3176623 - | TonB-dependent receptor Daci_2897 3179426 - 3179067 - | hypothetical protein Daci_2898 3179640 - 3179990 + | hypothetical protein Daci_2899 3180184 - 3182253 + | TonB-dependent siderophore receptor TERM 2481 3182371 - 3182329 - T 76 -5.7 -4.62783 | gap 3 CACCGAGCTGAAAAA GGCCGGTCTCCTTGAATGGC GCACAG GAC-TTCA-GGAG-CCGGCC GGTTGCGACGCTTCC Daci_2900 3182490 - 3182359 - | hypothetical protein Daci_2901 3184515 - 3182758 - | peptidase M14, carboxypeptidase A TERM 2482 3184697 - 3184670 - R 95 -13.4 -4.13767 | opp_overlap 3184670 TGCGCCATGTGAAAA GGGCTGCAGCCC CGGA GAGATGCAGCCC TTTTTTGCTGGCGGA TERM 2483 3184670 - 3184697 + r 100 -11.2 -5.14563 | opp_overlap 3184670 TGCGCCATGTGAAAA GGGCTGCAGCCC CGGA GAGATGCAGCCC TTTTTTGCTGGCGGA Daci_2902 3186553 - 3184757 - | DEAD/DEAH box helicase domain-containing protein TERM 2484 3185023 - 3185054 + g 74 -14.4 -3.29511 | gap 1, opp_overlap 3185004 CACCGCCGCCGCCTT CGCCGTCAGGGCGCG GGC CGCGCC-TGGGGGCG TTCTGGGGGGCTGCC TERM 2485 3185233 - 3185270 + g 77 -15.5 -3.21416 | gap 1 TGGGAGCCTGACCAC GGCCGCCT-GCGCGGCCG CCA CGGTCGGGCTGGGTGGCC TTGGTGGTGCGGATG TERM 2486 3185839 - 3185849 + g 82 -3.2 -5.06414 | overlap 3185834 CGTTGATGATGTGCA GCAG CAC TTGC TTTTTCTTGCCGCGG TERM 2487 3187334 - 3187321 - g 75 -9.5 -4.07568 | GTCCGGTGGCGAAAA GCGCC GCGT GGCGC TGTGCAAGCTGCTGC TERM 2488 3188458 - 3188425 - g 89 -5.8 -5.19328 | AGCCGATAAGAAAAA GCGTCTGGGCGAGG AGGGTG CCAAGCCCAAGCGC ATGCGCTACAAGGCA Daci_2903 3186821 - 3188482 + | putative ABC transporter ATP-binding protein TERM 2489 3189421 - 3189438 + G 71 -9.8 -3.7347 | GGATTCGCACCGCGA GGCGCC CACTTC GGCGCC TTCTTCCATGTTGGC TERM 2490 3189796 - 3189844 + G 84 -4.7 -5.00616 | gap 4, overlap 3189798 CGTGCAGCGCACCGT GGGC-CGT-CTGGAGCCGCT-GCTG CAG CAGCTGGTGG-TCCAGGACGCGCGC TTTTTTGAAGACCGC TERM 2491 3190865 - 3190835 - g 74 -13.9 -3.30243 | opp_overlap 3190835 3190813 ACCCAGGCTGCACAA GCGCCGCAGGCCC TTGCT GGGCTTGCGGGGC AGGCTGCGTTGGCCG Daci_2904 3188543 - 3191146 + | hypothetical protein Daci_2905 3191314 - 3192459 + | monooxygenase FAD-binding Daci_2906 3193476 - 3192466 - | peptidase S58 DmpA Daci_2907 3193944 - 3193543 - | hypothetical protein Daci_2908 3194508 - 3193960 - | hypothetical protein TERM 2492 3194271 - 3194281 + g 78 -8.2 -4.29738 | overlap 3194244 TGTCGTGCACGGTGA CGGC AAA GCCG TTTTGCTCCATGTGC Daci_2909 3194996 - 3194505 - | blue (type1) copper domain-containing protein Daci_2910 3196399 - 3195017 - | multicopper oxidase type 3 TERM 2493 3195247 - 3195291 + g 74 -12 -3.64703 | overlap 3195248 CGATGGGGCCGAAGG GGCCCGTGCCCGTCATCATC GGGAA GGTGTTGTCGGGCAGGGGCA TTTCCATGGAGGCCA TERM 2494 3195248 - 3195290 + g 70 -15.5 -2.78679 | overlap 3195247 GATGGGGCCGAAGGG GCCCGTGCCCGTCATCATC GGGAA GGTGTTGTCGGGCAGGGGC ATTTCCATGGAGGCC Daci_2911 3197849 - 3196401 - | copper tolerance protein Daci_2912 3198238 - 3197846 - | hypothetical protein TERM 2495 3198204 - 3198192 - G 82 -9.1 -4.4648 | opp_overlap 3198192 3198189 AGGGGGACGAGAAAA TGCGC ACG GCGCA TGGTGTTCTCCTGAA Daci_2913 3198818 - 3198327 - | hypothetical protein Daci_2914 3199253 - 3198867 - | hypothetical protein Daci_2915 3201448 - 3199250 - | heavy metal translocating P-type ATPase TERM 2496 3199662 - 3199719 + g 77 -15.3 -3.21924 | overlap 3199663 3199709 TTGTCCTGCGGCAGC AGGCCGCCGCGCGCATCCTGGATGCCG GCTT CGGCAGCGATGGAGCGCACGGTGGCCG TGTTGTCGCCGCTGA TERM 2497 3199663 - 3199718 + g 79 -18.8 -2.5294 | overlap 3199662 3199709 TGTCCTGCGGCAGCA GGCCGCCGCGCGCATCCTGGATGCCG GCTT CGGCAGCGATGGAGCGCACGGTGGCC GTGTTGTCGCCGCTG Daci_2916 3201488 - 3201952 + | MerR family transcriptional regulator TERM 2498 3202720 - 3202762 + G 71 -11.9 -3.55815 | overlap 3202755 3202758 CTCGGGCCTGTATGC GCCGCTGCGGCGCCAC-CGGC TGG GCGGCGCGGCGCTG-GGCGGC TTTGCGCGCATGTTT Daci_2917 3202025 - 3202828 + | ABC-type transport system ipermease component Daci_2918 3202894 - 3203886 + | hypothetical protein Daci_2919 3203883 - 3204617 + | hypothetical protein TERM 2499 3204648 - 3204621 - T 100 -15.6 -4.54727 | GCCGGCAAATGAAAA CAGCGCCAGTCC GAAA GGAATGGCGCTG GGCAGGCATTTGCAG TERM 2500 3205023 - 3205007 - T 100 -13.7 -5.42862 | AGAGGCCGAAAAAAA GCGAGGC AGA GCCTCGC TGAAAGTTCGGGACG Daci_2920 3206104 - 3205076 - | porin Daci_2921 3206583 - 3207272 + | two component LuxR family transcriptional regulator Daci_2922 3209948 - 3207297 - | PAS/PAC sensor hybrid histidine kinase TERM 2501 3207425 - 3207369 - G 70 -8.3 -3.85698 | GGGCTTGGCCAGAAA GCCCCAGCCGCGCTCGGCCGCCTGGCG GCG CACCATGCCGTCGCGTTCGGCCGTGAC CAGGATCACGGGCGG Daci_2923 3210161 - 3211489 + | sodium:dicarboxylate symporter TERM 2502 3211528 - 3211549 + T 78 -13.7 -3.18274 | CCCTCTCCTGCTCGA TGCGGCGGC CTTG GTCGCCGCA TTCGCTTGCGATGCG Daci_2924 3212750 - 3211578 - | oxidoreductase domain-containing protein TERM 2503 3212268 - 3212226 - G 76 -14.1 -3.53012 | CGCCTCGCTGTGAAA GCCGTGCGAGAACTGCATC TGCAC GATGCGGATCTCGCCCAGC TCGCCCTGCGCGACC TERM 2504 3212386 - 3212406 + g 72 -8.9 -4.07568 | AGCTGCAGAGCTTCG GCCGTGGTG AAG CACAGCGGC TTTTCGCAGACCACG Daci_2925 3213775 - 3212762 - | inositol 2-dehydrogenase TERM 2505 3213458 - 3213485 + g 72 -8.3 -4.07568 | CTGCACGATGCGCAG GCAGCCGGCAG CGGTGA CTGCCAGCGGC TTTTCGCAGAACACC Daci_2926 3214612 - 3213791 - | xylose isomerase domain-containing protein Daci_2927 3215545 - 3214622 - | xylose isomerase domain-containing protein TERM 2506 3215561 - 3215582 + r 86 -12.9 -3.96068 | GATGCCTCCCTGCAG GGCGCGCCG TCAG CGCCGCGCC TTCTTGTTGCGGTAC Daci_2928 3216625 - 3215570 - | monosaccharide-transporting ATPase Daci_2929 3218219 - 3216654 - | ABC transporter related TERM 2507 3217167 - 3217146 - G 77 -11.6 -3.85698 | overlap 3217147 GTCCTCGGTGAGAAA GGCCATGC CCAGCC GCATGGCC TGGGCAGGCGAGGTG Daci_2930 3219200 - 3218223 - | periplasmic binding protein/LacI transcriptional regulator TERM 2508 3218733 - 3218759 + g 77 -4.2 -4.72272 | overlap 3218715 CAGCAGCTTGCAGAC CTGGCGGGCCTG CAG CGTGCCCGAGAG TTTTTCGTCGGAGGC TERM 2509 3219176 - 3219189 + g 82 -5.9 -4.77438 | opp_overlap 3219166 3219162 3219163 AGGCAGCGGCAATGG CCGCC AGCA GGTGG TTTTTCCTCATCCCT Daci_2931 3219455 - 3221338 + | thiamine pyrophosphate protein central region TERM 2510 3221599 - 3221558 - g 75 -9.5 -4.10007 | gap 2 ACAAGTTTCCGAAAA CCGGCCC-CGCGC-TCAAG GCCAGG CTTGACGCGCACGGGCTGG CCTGCGTCTCCGGCT TERM 2511 3222316 - 3222285 - g 81 -7.2 -4.64766 | gap 1 CGCATACGCGAAAAA GGGCTACGAG-ACGC TGC GCGCGCTCGTGGACC GGCTGGGCGCCTGAG Daci_2932 3221404 - 3222330 + | xylose isomerase domain-containing protein Daci_2933 3222375 - 3223472 + | porin TERM 2512 3223535 - 3223555 + G 72 -13.9 -3.21704 | overlap 3223527 GGTGGGCCGGCTCTT GCGGGGCGG CTG CCGCGCCGC TTGGCTGTATTCTTG Daci_2934 3223533 - 3224582 + | hypothetical protein Daci_2935 3225745 - 3224600 - | acyl-CoA dehydrogenase domain-containing protein Daci_2936 3226479 - 3225772 - | cell morphology protein Daci_2937 3227960 - 3226476 - | AMP-dependent synthetase and ligase Daci_2938 3228257 - 3228018 - | phosphopantetheine-binding Daci_2939 3229859 - 3228279 - | membrane bound O-acyl transferase MBOAT family protein TERM 2513 3229889 - 3229914 + r 91 -8.2 -4.77438 | CACGCAGGCGGGGAG GCGGCGTCCA TCTCCT TGAGCGCCGC TTTTTCATCGTCCGT Daci_2940 3231006 - 3229873 - | cell morphology protein TERM 2514 3230579 - 3230607 + g 75 -10.2 -3.96624 | ATGCGCGACTTGTCG GGCACGGCCACC ACCAG GGTGGCAATGCC TTTGTCCTGCAACTG Daci_2941 3232051 - 3231011 - | hypothetical protein TERM 2515 3232053 - 3232064 + r 81 -5.8 -4.77867 | overlap 3232052 TTGGTCGAATCCATG GGAG CTTT CTCC TTTTCTCTTGTCTGT Daci_2942 3234976 - 3232109 - | TPR repeat-containing protein TERM 2516 3232186 - 3232218 + g 72 -15.6 -2.84732 | overlap 3232178 TGTTGAAGCGGTACT GCATGGACCAGTCC ACATA GGACTGGGCCGTGC TGTAGTGGCTTTCGC TERM 2517 3234114 - 3234127 + g 72 -3.7 -4.59773 | overlap 3234107 TTGTCCTGCGCCAGC GCCTC GTCT GCGGC TTTTTCCGCATCGGG TERM 2518 3234317 - 3234336 + g 82 -6.4 -4.68384 | gap 1 GCGGCGCAGGGTCTG GCG-CTTGG CCA CCAGGTCGC TTTTGTTGGGTGGGT TERM 2519 3234477 - 3234497 + g 82 -6.1 -4.6902 | overlap 3234482 AAGGCCTGCTCGGCC CTGCGCG CGCTGTC CGCGTAG TTTTTGGCGTTGTAG Daci_2943 3236694 - 3234973 - | bacteriophage N4 adsorption protein B Daci_2944 3238962 - 3236878 - | hypothetical protein Daci_2945 3240243 - 3239041 - | UDP-N-acetylglucosamine 2-epimerase TERM 2520 3240855 - 3240825 - H 79 -15.5 -2.71791 | opp_overlap 3240830, overlap 3240830 AGCCGGCCCGGAAAC GAAAACGGGCCCC GTGTA GGGGCCCGTTTTG CTGGGTGTATGGCGG TERM 2521 3240830 - 3240850 + H 100 -15.4 -4.3014 | opp_overlap 3240830 3240825 GCCCGGAAACGAAAA CGGGCCCC GTGTA GGGGCCCG TTTTGCTGGGTGTAT TERM 2522 3240850 - 3240830 - H 100 -15.4 -4.54727 | opp_overlap 3240830, overlap 3240825 GCCCGGAAACGAAAA CGGGCCCC GTGTA GGGGCCCG TTTTGCTGGGTGTAT TERM 2523 3242595 - 3242580 - g 91 -3.2 -5.40474 | AGCCCGGCAAAAAAA CCGG CAACAAAC CCGG CAACAAACCCGACCG Daci_2946 3241574 - 3242632 + | hypothetical protein TERM 2524 3242821 - 3242779 - g 74 -12.7 -3.66732 | gap 1, opp_overlap 3242803, overlap 3242770 CAAGGACGCCAAGAA CGCGCCGTATCTGGGCGTGG ACTA CGACGG-CAGCTACGGCGCG CAGACGCGCGCCGCG TERM 2525 3243560 - 3243517 - g 71 -9.6 -3.78934 | gap 1, overlap 3243519 CGTGTCGCAGAACAA CATGGG-CTGGAAATCCGCCT ACC AGGCAGACCTGCAGTCCCAGG GCAAGCATTGGGTGA Daci_2947 3242678 - 3243778 + | hypothetical protein Daci_2948 3243843 - 3245669 + | TPR repeat-containing protein Daci_2949 3246910 - 3245693 - | major facilitator transporter TERM 2526 3246723 - 3246688 - G 72 -6.9 -4.30576 | gap 2 GGGCCAGCAGCAAAA TGCCCAGCGCATAGCCC AGCT GGGTCA-GCG-TGGGCA CAAAGCCCACGGCGC TERM 2527 3246782 - 3246728 - G 81 -12 -3.86015 | gap 1, opp_overlap 3246766 CAGCGTGGGCACAAA GCCCACGGCGCGCTCGCCCGCGCCC AGGTCG GGGC-CGAGCACGCCCAGCATGGGC TGGCTGTAGTAGAGC TERM 2528 3247117 - 3247096 - g 83 -15.1 -3.55444 | TGCGCATCGTCGAAA GCGGCAGCC TCTC GGCCGCCGC GCAGCAGATGTCCAC Daci_2950 3246963 - 3247973 + | LysR family transcriptional regulator Daci_2951 3248094 - 3248642 + | ECF subfamily RNA polymerase sigma-24 factor TERM 2529 3248845 - 3248818 - g 100 -17.8 -3.87815 | gap 1, overlap 3248790 3248789 3248793 GCCCAGCGCCAGAAA CTGCGC-CAGCGC AGG GCGCTGCGCGCAG GCACGGCTGCGGCCC Daci_2952 3248632 - 3249591 + | anti-FecI sigma factor, FecR Daci_2953 3249803 - 3252181 + | TonB-dependent siderophore receptor TERM 2530 3252251 - 3252222 - T 100 -20.9 -4.07568 | opp_overlap 3252228, overlap 3252228 CCGGCCTCTGCAAAA GACAAAGGCCCAC GCAA GTGGGCCTTTGTC CATCCGGGCCGTGCC TERM 2531 3252245 - 3252228 - T 100 -12.7 -4.45168 | opp_overlap 3252228, overlap 3252222 TCTGCAAAAGACAAA GGCCCAC GCAA GTGGGCC TTTGTCCATCCGGGC TERM 2532 3252228 - 3252245 + T 86 -12.7 -3.91897 | opp_overlap 3252228 3252222 TCTGCAAAAGACAAA GGCCCAC GCAA GTGGGCC TTTGTCCATCCGGGC Daci_2954 3252532 - 3252269 - | hypothetical protein Daci_2955 3252739 - 3253032 + | hypothetical protein TERM 2533 3253835 - 3253859 + G 73 -7.8 -4.11692 | gap 1 GGAGGCCGAAGGCCT GCGCGTGCGCA AGGA TG-GCTCGCGC TTTTGGGCCTCGGTG Daci_2956 3253119 - 3255071 + | PAS/PAC sensor hybrid histidine kinase Daci_2957 3257751 - 3255730 - | Fis family GAF modulated sigma54 specific transcriptional regulator TERM 2534 3258207 - 3258218 + G 73 -7.2 -4.18018 | overlap 3258200 CAGCTGGACGCCGCG GCGC CCGT GCGC TTTTCGCTGGACGAG Daci_2958 3258000 - 3259802 + | flavin-containing monooxygenase, putative Daci_2959 3259818 - 3260939 + | alcohol dehydrogenase TERM 2535 3261055 - 3261031 - T 100 -13.7 -5.72622 | opp_overlap 3261023 3261031 TGCACAAAGAAAAAA GCCCTTGATTG AAT CAATCAAGGAC TTAGATCATTTTGGC Daci_2960 3262153 - 3261170 - | LysR family transcriptional regulator Daci_2961 3262338 - 3262742 + | 4-oxalocrotonate tautomerase TERM 2536 3262763 - 3262747 - T 100 -10.8 -4.8622 | opp_overlap 3262747, overlap 3262729 GCGCGCAATGAAAAA CGGGCC GCGAT GGCCCG TTCTTCTTGGGGTTC TERM 2537 3262747 - 3262763 + T 82 -11.5 -3.97139 | opp_overlap 3262729 3262747 GCGCGCAATGAAAAA CGGGCCG CGA TGGCCCG TTCTTCTTGGGGTTC Daci_2962 3263705 - 3262788 - | band 7 protein TERM 2538 3263068 - 3263113 + g 70 -13.1 -3.25877 | overlap 3263067 ATGACGGCCTGCTTC TCGCCTTCGGAGCGTGCGATG AAGG CTTCGCGCTCGCCGGTGGCGA TGTTGATCTGTTCCT Daci_2963 3264231 - 3263806 - | hypothetical protein TERM 2539 3264468 - 3264436 - g 72 -13.4 -3.21395 | gap 1, overlap 3264434 ACCGCTCCGAGAACA CCTCGGGCCTGGGCA TCCG CGCCCTGGCCC-AGG CCATCGAGGAGGAAG TERM 2540 3264932 - 3264922 - g 72 -8.2 -4.07568 | TGGCCTTCCTGAAAA GCCC CGT GGGC CAGATGTACCACCAG TERM 2541 3265147 - 3265117 - g 76 -13.2 -3.39784 | opp_overlap 3265108, overlap 3265115 CCACGTCGAACAAGA TCGTCTGGCACCAC GCC GTGGCGCCCGGCGA CGTGGTCGTTGTGGA Daci_2964 3264381 - 3266996 + | lysine decarboxylase TERM 2542 3267055 - 3267027 - T 100 -13.8 -5.24531 | gap 1, opp_overlap 3267027 ACGGCCCATAAAAAA GGCGCGG-GTCCC GAAA GGGGCTCCGCGCC TTTTTCATTGCGCCG TERM 2543 3267027 - 3267055 + T 100 -16 -4.8622 | gap 1, opp_overlap 3267027 ACGGCCCATAAAAAA GGCGCGG-GTCCC GAAA GGGGCTCCGCGCC TTTTTCATTGCGCCG Daci_2965 3268154 - 3267093 - | hypothetical protein TERM 2544 3267852 - 3267864 + g 71 -10.5 -3.78934 | overlap 3267859 3267862 CAGGCCGATGTTGCC GCCCG CGC CGGGC TTGTTGTCCACGACC TERM 2545 3268250 - 3268279 + r 76 -13.6 -3.07816 | overlap 3268271 GTGCAAGGTTGCAGG GGCGCCGCGCG-CC GGGT GGACG-GCGGCGCC TTCAGTGGCTCAGCC Daci_2966 3269547 - 3268300 - | L-carnitine dehydratase/bile acid-inducible protein F TERM 2546 3269348 - 3269335 - G 78 -5.9 -4.62302 | overlap 3269337 GAACAGCGGGAAAAA GCCCG AGCC CGAGC CCAGCAGCTTGCGCG Daci_2967 3270582 - 3269587 - | pyruvate carboxyltransferase TERM 2547 3270760 - 3270739 - g 73 -12.9 -3.40403 | GGTGGCCGACGAGAA CGCCGCGCC GGGC GGCGTGGCG GCCGTGGACAGGGCC Daci_2968 3270698 - 3271429 + | IclR family transcriptional regulator Daci_2969 3272374 - 3271454 - | zinc/iron permease TERM 2548 3272119 - 3272090 - G 70 -12.1 -3.38272 | gap 1 CAGGATCAGCGAGAA GGCGCACGCGGCCA GCA TGACCCCG-GCGCC AAAGCCGAACAGGGT Daci_2970 3273045 - 3272410 - | superoxide dismutase Daci_2971 3273620 - 3273108 - | hypothetical protein TERM 2549 3273815 - 3273788 - R 100 -19.9 -5.78622 | CCAGGCGAAAAAAAA GCCCCGCAGGC GGCAAT GCCTGCGGGGC GGGTCGCAGTCTGGC Daci_2972 3274637 - 3273837 - | short-chain dehydrogenase/reductase SDR Daci_2973 3274750 - 3276579 + | extracellular solute-binding protein TERM 2550 3277653 - 3277663 + G 75 -6.8 -4.42974 | overlap 3277627 3277626 CCTGGTGACCAAGCT GGTC AGT GACC TTTGTTATGTGTGGG Daci_2974 3276676 - 3277704 + | binding-protein-dependent transport systems inner membrane component Daci_2975 3277836 - 3278975 + | binding-protein-dependent transport systems inner membrane component TERM 2551 3280089 - 3280034 - g 72 -13.2 -3.14132 | gap 1, opp_overlap 3280085, overlap 3279996 3279993 CTGCTGCCCCATGAA GGCCGGCTGCGCATTGCCGGCCA-TGC CTG GCAGCAGCCAGCCACGCGCAACTCGCC CGCCAACCGTGCGCT Daci_2976 3278972 - 3280660 + | ABC transporter related Daci_2977 3281305 - 3280679 - | Lipocalin family protein TERM 2552 3281045 - 3281065 + g 86 -10.4 -4.59109 | AAGCTGTGTGTACTC GGCCTGGG TGCGC TCCAGGCC TTTTTCGAAACTGTG TERM 2553 3281408 - 3281388 - H 70 -4.5 -4.57353 | opp_overlap 3281405, overlap 3281389 CTTTAGGACAGAAAA CCGGGCCGC AGT GTAGGCCGG CGCTGCCTGCGCCGG Daci_2978 3281550 - 3281711 + | hypothetical protein TERM 2554 3281829 - 3281843 + F 95 -7.1 -5.46657 | opp_overlap 3281829 CGGAAGCTACTCAAA CCCCT CTTGC AGGGG TTTTTTCTTGACCTA Daci_2979 3281992 - 3282297 + | hypothetical protein Daci_2980 3282305 - 3283705 + | integrase family protein Daci_2981 3283715 - 3286324 + | integrase family protein TERM 2555 3286586 - 3286561 - g 74 -11.1 -3.72576 | gap 1 CGGGTGCTCATTAAA GCGTGGTCCGCC TAT GCCGGACC-CGC TGAGCCCAAGCTACC Daci_2982 3286321 - 3287001 + | alpha/beta hydrolase fold TERM 2556 3287028 - 3287007 - T 100 -13.7 -5.16237 | opp_overlap 3287007 AATTCCATGAAAAAA GCGCCGAAG TTGC CCTCGGCGC TTTGTAGTTACGATG TERM 2557 3287007 - 3287028 + T 84 -11.5 -4.0616 | opp_overlap 3287007 AATTCCATGAAAAAA GCGCCGAAG TTGC CCTCGGCGC TTTGTAGTTACGATG Daci_2983 3287517 - 3287182 - | MerR family transcriptional regulator Daci_2984 3288509 - 3287514 - | heat shock protein DnaJ domain-containing protein Daci_2985 3288678 - 3289523 + | cytochrome c553-like protein TERM 2558 3290836 - 3290856 + G 70 -8.2 -3.8709 | overlap 3290837 3290839 TAACATGGAGGTTTA TCGCGCCC GGGAA GGGCGTGG TTTCTGAGAGGCTTT Daci_2986 3289520 - 3290863 + | gluconate 2-dehydrogenase (acceptor) TERM 2559 3290979 - 3291019 + G 90 -13.4 -4.09509 | gap 1, opp_overlap 3290979 3290975 3290974 3290972 GCAACCAATACCGAA GCACGTTTGC-GGAACTGG CAAG CCAGTTCCCGCAGATGCGC TTTGTCTGGCTTGAT Daci_2987 3290873 - 3291274 + | thioredoxin domain-containing protein TERM 2560 3291290 - 3291325 + F 71 -5.9 -4.36914 | CGCAGGGCCAAGGGT GCGCGGGCGGGCCTG AGCACG CCGTCCTGTCCCCGC TTTTGTGCGGGGCGG TERM 2561 3291391 - 3291409 + F 100 -10.2 -5.75945 | opp_overlap 3291390 3291391 3291404 TATTCACGACCAAAC GGGCGGGT ACC AACCGCCC TTTTTTTTGGGCGAT TERM 2562 3291453 - 3291507 + F 72 -2.2 -4.78848 | gap 3, overlap 3291452 3291471 3291473 TCGGGATTGCCATGG GGCTCGG--CGCTGTTGGGACA-TGGC TGCT GCCAATGTTTCAGGGGCGTTCCGGGTC TTTTGTGTTTGCAGG TERM 2563 3291944 - 3291915 - g 78 -9.9 -4.20918 | overlap 3291916 GCCAATCGCAAGAAA TTCCGCGGCACGC TGGA GCGTGCCGAAGAT GGTGGCTGGCAGATC TERM 2564 3291943 - 3291916 - g 72 -13.4 -3.12069 | overlap 3291915 CCAATCGCAAGAAAT TCCGCGGCACGC TGGA GCGTGCCGAAGA TGGTGGCTGGCAGAT TERM 2565 3292023 - 3292010 - g 77 -3.7 -4.74801 | opp_overlap 3292016 GAAGGTCAGCAAAAA GCGTG TTCC CGCGC CCCTGCAGGCGCTGG Daci_2988 3291540 - 3292118 + | hypothetical protein Daci_2989 3292206 - 3293693 + | NusA antitermination factor Daci_2990 3293717 - 3296578 + | translation initiation factor IF-2 Daci_2991 3296585 - 3296956 + | ribosome-binding factor A Daci_2992 3296961 - 3297926 + | tRNA pseudouridine synthase B TERM 2566 3297933 - 3297913 - f 72 -12.5 -3.07522 | AGATTTTGGAAGACA CGCCGCGCC CAT GACGCAGCG GCAATGGGAAAACAC Daci_2993 3297950 - 3299776 + | GTP-binding protein TypA TERM 2567 3299829 - 3299856 + T 100 -15.6 -4.36914 | opp_overlap 3299835, overlap 3299831 3299835 TTCATCGCCCTGACT GTCAAAGGCCGC ATCT GCGGCCTTTGTC TTTTGTGGCGCGCCG TERM 2568 3299831 - 3299854 + T 100 -16.8 -3.79419 | opp_overlap 3299835, overlap 3299829 3299835 CATCGCCCTGACTGT CAAAGGCCGC ATCT GCGGCCTTTG TCTTTTGTGGCGCGC TERM 2569 3299835 - 3299850 + T 95 -11.8 -4.51238 | opp_overlap 3299835, overlap 3299831 3299829 GCCCTGACTGTCAAA GGCCGC ATCT GCGGCC TTTGTCTTTTGTGGC TERM 2570 3299850 - 3299835 - T 77 -11.8 -3.57144 | opp_overlap 3299831 3299829 3299835 GCCCTGACTGTCAAA GGCCGC ATCT GCGGCC TTTGTCTTTTGTGGC TERM 2571 3299948 - 3299902 - T 74 -10.9 -3.53031 | gap 1, overlap 3299898 GCCACGGCAAAGGAA CTGCTGCTGCTACTGCTTGCAA CTGC TTGCTA-CTGCAGCTGCAGCAG CAACTCGCGCAGGCG Daci_2994 3300818 - 3299931 - | LysR family transcriptional regulator Daci_2995 3300902 - 3302098 + | L-carnitine dehydratase/bile acid-inducible protein F TERM 2572 3302145 - 3302168 + G 89 -8 -4.82901 | GGCGCCGCCTGGAAC GCCGTGCCCC GCAT GGGCCAGGGC TTTTTCTGGCAGGAC Daci_2996 3302100 - 3302597 + | hypothetical protein Daci_2997 3302640 - 3303671 + | hypothetical protein Daci_2998 3303814 - 3304905 + | enoyl-CoA hydratase TERM 2573 3304962 - 3304936 - T 95 -15.1 -4.08767 | opp_overlap 3304936 TTCAGGCTTCCAAAA GGCCATCCGGC GCCAT GCCGGGTGGCC TTTTTTCATTCAACG TERM 2574 3304936 - 3304962 + T 100 -18 -5.26875 | opp_overlap 3304936 TTCAGGCTTCCAAAA GGCCATCCGGCG CCA TGCCGGGTGGCC TTTTTTCATTCAACG Daci_2999 3305694 - 3304972 - | TetR family transcriptional regulator TERM 2575 3306282 - 3306296 + G 73 -7 -4.20084 | GCAGATGGTGCACCT GGCGCG TGA CACGCC TTTTGGCTGCGTGCT TERM 2576 3306299 - 3306321 + G 84 -7.6 -4.72272 | overlap 3306300 3306301 CGCGTGACACGCCTT TTGGCTGCGT GCT GCGCAGCCGC TTTTTGCTGGGCCAG Daci_3000 3305794 - 3306489 + | hypothetical protein Daci_3001 3307344 - 3306505 - | putative transmembrane anti-sigma factor Daci_3002 3307930 - 3307355 - | ECF subfamily RNA polymerase sigma-24 factor Daci_3003 3308377 - 3307961 - | hypothetical protein TERM 2577 3308491 - 3308473 - R 85 -3.1 -5.44721 | gap 1 AGCAGTGCAAAAAAA GCTG-CGG ATGC CCGTCAAC GGTTGAAGCTCTTCA Daci_3004 3309008 - 3308487 - | SsrA-binding protein TERM 2578 3309022 - 3309039 + H 70 -4.8 -4.564 | AATACTGGATTGCCG TCTCGC CTCCGT GCGGGA TTTTAGTTTCGCCTT Daci_3005 3309075 - 3309581 + | cyclase/dehydrase Daci_3006 3309574 - 3309918 + | hypothetical protein Daci_3007 3310485 - 3309931 - | hypothetical protein TERM 2579 3310101 - 3310123 + g 70 -4 -4.4715 | overlap 3310088 3310105 GTGCGCAGTTGTCCT GGCGCTGCTT GGC AAGCCGTTCC TTTTCTGCCTTGGCC Daci_3008 3310622 - 3312097 + | inosine-5'-monophosphate dehydrogenase TERM 2580 3312131 - 3312159 + T 100 -24.7 -5.61596 | opp_overlap 3312131 GCGCGAGATGGAAAA GAGGTCCGGGCAG CCA CTGCCCGGACCTC TTTTTTTGTGCGCCT TERM 2581 3312159 - 3312131 - T 100 -24.7 -4.2349 | opp_overlap 3312131 GCGCGAGATGGAAAA GAGGTCCGGGCAG CCA CTGCCCGGACCTC TTTTTTTGTGCGCCT Daci_3009 3313881 - 3312187 - | dihydroxy-acid dehydratase TERM 2582 3312250 - 3312286 + g 85 -18.6 -3.05384 | opp_overlap 3312247 3312242 GTTGAAAGCGAACTT GGCCTGCACGCCCCGC GTGTA GCGGGGCGCGGGGGCC TTCCATGCCGCGCGG TERM 2583 3314763 - 3314773 + G 72 -8.2 -4.07568 | GCCCGGCGTGGTCTA CCGC GAG GCGG TTTTCGCCAGCGCCC TERM 2584 3314861 - 3314874 + G 73 -9.5 -3.93236 | overlap 3314865 CCGACGCCATGTCGC CCGCG CTGG CGCGG TTTGTCGGCTTCGTG Daci_3010 3313975 - 3314904 + | LysR family transcriptional regulator TERM 2585 3315005 - 3315024 + F 100 -10 -5.45802 | gap 1, opp_overlap 3314979 3314999 3314998 TGATAGAATTCGGGC CAGGCC-GG ACA CCAGGCCTG TTTTTGTTTTCAGCC Daci_3011 3315045 - 3315323 + | prevent-host-death family protein Daci_3012 3315320 - 3315754 + | hypothetical protein Daci_3013 3315780 - 3317402 + | bifunctional GMP synthase/glutamine amidotransferase protein TERM 2586 3317452 - 3317469 + T 100 -12.7 -5.72622 | GTGTTTCCACCTCAA GCCCGCA TCAA TGCGGGC TTTTTTGTTTCTGAC Daci_3014 3317796 - 3317569 - | hypothetical protein TERM 2587 3318261 - 3318236 - g 76 -3.1 -4.69053 | gap 1 CATGATTCAAGAAAA GCCCCTG-GCGG CAA CCGAACTGGAGC GGCCTGCCATGGCCT Daci_3015 3318222 - 3319556 + | peptidase M16 domain-containing protein Daci_3016 3320043 - 3319624 - | hypothetical protein Daci_3017 3321036 - 3320056 - | hypothetical protein Daci_3018 3321136 - 3322086 + | LysR family transcriptional regulator Daci_3019 3322441 - 3322142 - | antibiotic biosynthesis monooxygenase Daci_3020 3323464 - 3322445 - | zinc-binding alcohol dehydrogenase family protein TERM 2588 3323300 - 3323321 + g 74 -13.7 -3.25823 | gap 1, overlap 3323300 CGTTTGCCCCTCGGC GG-GCGCGCC GCT GGCGCGCACC TTGGTGTCCACCGGA Daci_3021 3324630 - 3323524 - | NADH:flavin oxidoreductase/NADH oxidase TERM 2589 3325220 - 3325231 + G 72 -5.8 -4.36914 | overlap 3325217 ATGGGAGGCGGGGAC CTGG CAGG CCAG TTTTATGACGCGGGC Daci_3022 3324851 - 3325411 + | deaminase-reductase domain-containing protein Daci_3023 3326496 - 3325441 - | LysR family transcriptional regulator Daci_3024 3328038 - 3326524 - | 4-hydroxyphenylacetate 3-hydroxylase Daci_3025 3329186 - 3328038 - | extracellular ligand-binding receptor TERM 2590 3328671 - 3328698 + g 70 -9 -3.8917 | overlap 3328668 CTTTCTTGCGCCCAG GCCCGTGGCGGC CCAG GTGGCCAGGGGC TTGTTCTCGTTGACC Daci_3026 3329473 - 3330390 + | inner-membrane translocator TERM 2591 3330879 - 3330899 + G 79 -4.5 -4.72986 | overlap 3330868 CTGCTGGTGGCCGCC GCCGTGGCC ACG GTCTTCGGC TTTTTGCTGGGCCTG Daci_3027 3330390 - 3331571 + | inner-membrane translocator Daci_3028 3331561 - 3332397 + | ABC transporter related Daci_3029 3332390 - 3333088 + | ABC transporter related TERM 2592 3333160 - 3333179 + F 88 -3.4 -5.52384 | opp_overlap 3333143 3333142, overlap 3333162 AGTCGGCACCGCGCC GATGCGGG ACGG CCTGCGCC TTTTTTTCCTGAGAG Daci_3030 3333204 - 3334487 + | hypothetical protein Daci_3031 3334541 - 3334975 + | endoribonuclease L-PSP Daci_3032 3335029 - 3335706 + | hypothetical protein Daci_3033 3336657 - 3335740 - | LysR family transcriptional regulator Daci_3034 3336752 - 3337993 + | beta-lactamase TERM 2593 3338559 - 3338599 + G 74 -14.7 -3.04144 | gap 1, overlap 3338587 3338591 CCGCCTTCCCGACTT CGCGGGGCAGGCGGCAGG CCGCCA CCTGCCGC-TGCGGCGCG TGTTCACCCTGGCGG Daci_3035 3337990 - 3339162 + | major facilitator transporter Daci_3036 3341467 - 3339191 - | response regulator receiver modulated diguanylate cyclase/phosphodiesterase TERM 2594 3339974 - 3339946 - G 81 -10.1 -4.33274 | overlap 3339947 GGTAGACCAGGAAAA GCTGGGCGCCGTC GAT GGCGGCGCGCAGG TCGGACAGCAGCAGG TERM 2595 3339973 - 3339947 - G 72 -13.6 -3.19482 | overlap 3339946 GTAGACCAGGAAAAG CTGGGCGCCGTC GAT GGCGGCGCGCAG GTCGGACAGCAGCAG Daci_3037 3342236 - 3341496 - | diguanylate cyclase TERM 2596 3342107 - 3342146 + g 71 -10.7 -3.61715 | gap 2 GCTCATAGGCGGTCA GCAGCACGCCCAGGGCCTG GTGG CAGGCC-TGGGCGC-CGGC TTCTTCGCCCCGGTC Daci_3038 3342637 - 3342236 - | putative lipoprotein Daci_3039 3343287 - 3342706 - | hypothetical protein Daci_3040 3344520 - 3343288 - | protein serine/threonine phosphatase Daci_3041 3344667 - 3345668 + | taurine dioxygenase Daci_3042 3345935 - 3345678 - | hypothetical protein Daci_3043 3346125 - 3347165 + | putative mRNA 3-end processing factor Daci_3044 3347162 - 3348853 + | ATP-dependent DNA ligase TERM 2597 3350653 - 3350620 - g 70 -12.3 -3.28712 | gap 1 GCCGCGCCGCCAGAA CGCG-GCCCACCGTGC CGC GCTGGGCGGGCGCGCG CATGCCGCTGTCCAC TERM 2598 3351700 - 3351651 - g 82 -3.3 -5.08824 | gap 1, opp_overlap 3351691, overlap 3351652 3351656 3351688 CGTCCACGGAAAAAA CCCAAGGCAGACCAGCCCCCCGCC GTG GACGAGGACACGGCC-GCCGTGCG CCGTACGCTGGATTT Daci_3045 3348909 - 3351809 + | DEAD/DEAH box helicase domain-containing protein Daci_3046 3351826 - 3352545 + | metallophosphoesterase TERM 2599 3352617 - 3352628 + F 93 -7.2 -5.30155 | opp_overlap 3352617 GCGGGGCAGCAGAAA GCGC CGCA GCGC TTTTTTGATTCATCA Daci_3047 3352654 - 3353271 + | hypothetical protein TERM 2600 3353471 - 3353483 + G 79 -2.6 -4.82901 | opp_overlap 3353459 3353457, overlap 3353459 AGACGCAGGCCTGAT CTGC GGCTG GCGG TTTTTCTGCGACACG TERM 2601 3354041 - 3354093 + G 85 -18.9 -3.04792 | CCACCTGGGCCGGCT GCGCCGGCTGCTGGTGCGCCTGCAG CGC CTGCTGGCGCCCGAGCCGGCCGCGC TGTTCCGCCTGCTGC Daci_3048 3353418 - 3354461 + | Mg2 transporter protein CorA family protein Daci_3049 3355979 - 3354465 - | hypothetical protein Daci_3050 3356597 - 3356007 - | small permease component of tripartite tricarboxylate transporter Daci_3051 3357646 - 3356609 - | hypothetical protein TERM 2602 3356725 - 3356738 + g 81 -3.7 -4.84359 | GCCCCGTCATGTACT CGGGC TTGA GCGCG TTTTTCTCCAGGTAC Daci_3052 3358993 - 3357752 - | Serine--glyoxylate transaminase Daci_3053 3359152 - 3359841 + | GntR family transcriptional regulator TERM 2603 3361053 - 3361043 - g 81 -3.2 -4.83169 | AGCGGCCCAGAAAAA CCTC TGG GAAG TGCGCAAGGCGGGGC TERM 2604 3362115 - 3362070 - g 78 -6.7 -4.58283 | gap 1, opp_overlap 3362089, overlap 3362071 3362072 CAACTGGGCGAAAAA CTGCTGGGCCTGTCCGCCAG GCGCTCG CTGCCGGCCTGGCGCAGC-G ACACCTTCTGGCGCG Daci_3054 3359838 - 3362936 + | D-lactate dehydrogenase (cytochrome) Daci_3055 3362974 - 3363390 + | hypothetical protein Daci_3056 3364872 - 3363415 - | outer membrane efflux protein Daci_3057 3366920 - 3364869 - | ABC transporter related Daci_3058 3368467 - 3366956 - | hypothetical protein TERM 2605 3367745 - 3367755 + g 70 -3.2 -4.48263 | CTGCTGTGGAGCTGG TTGG CGT CCGA TTTTCGTATTATCTG TERM 2606 3367874 - 3367897 + g 71 -2.5 -4.59511 | gap 1, overlap 3367889 AGGGTGATGGGATTG CTC-CAAGGT CATGT ATCTTGAGAG TTTTTCAAGCGTGTT TERM 2607 3368026 - 3368038 + g 76 -7.7 -4.34402 | GCGGCAAATCCACGG GCCAA ACG TTGGC TTTTGATGTGGCAAA Daci_3059 3369393 - 3368497 - | cupin 4 family protein TERM 2608 3369205 - 3369217 + g 86 -6.3 -4.84359 | TATGTACATCTCTGA TGGAA TAA TTCCA TTTTTGTGCAGGTGC Daci_3060 3370409 - 3369390 - | radical SAM domain-containing protein TERM 2609 3370452 - 3370468 + r 85 -5.8 -5.03747 | opp_overlap 3370452 TCTCTTAATATGAAA GCCGAG TTTAT TTCGGC TTTTTTGAAGAATTT Daci_3061 3372043 - 3370769 - | secretion protein HlyD family protein TERM 2610 3371753 - 3371743 - G 83 -4.6 -4.91109 | opp_overlap 3371743 CCGCCATTACAAAAA GGAC ATC GCCC TGTTTTACCCGCTGG TERM 2611 3372315 - 3372327 + r 74 -6.9 -4.4078 | AATGCGGTGCCGGGT GGCCG ATT TGGCC TTTTGCTTCAGCGCG Daci_3062 3373021 - 3372335 - | GntR family transcriptional regulator Daci_3063 3373096 - 3374199 + | transglutaminase domain-containing protein Daci_3064 3376395 - 3374236 - | TonB-dependent siderophore receptor TERM 2612 3375171 - 3375151 - G 71 -11.8 -3.63627 | opp_overlap 3375164 3375166, overlap 3375152 GTTGTAGACGTCAAA CGGCGCGG TCAGG CCGCGCCA GGTGGACTGGCTGGT TERM 2613 3376690 - 3376710 + r 79 -15.4 -2.78384 | TTAGCCCCTTTCACG CCGGGGCG CCAAC CGCCCCGG TCTCCTCAGGCCAGG Daci_3065 3377441 - 3376716 - | hypothetical protein Daci_3066 3378314 - 3377487 - | AraC family transcriptional regulator TERM 2614 3377613 - 3377583 - G 73 -12.4 -3.53012 | GCTCTGGTCGGCAAA GCCGCTGTGCGCGG CGG CCTCGGCCAGCGGC ATGCCGCCGGCGATG TERM 2615 3377972 - 3377938 - G 73 -7.6 -4.13728 | overlap 3377929 3377940 3377941 TACAGAGCCTGAAAA CACGCGGCCAGGCGCG GGT CGCGCACGGCGGGCTG GCGGAACTCGAAGCC Daci_3067 3379686 - 3378328 - | chromate transporter TERM 2616 3379334 - 3379317 - G 70 -12.7 -3.32698 | overlap 3379315 TGATGCCATAGAAGA TGCCGGC AATG GCCGGCA CATGGCCGAAGGCCA Daci_3068 3380531 - 3379782 - | peptide methionine sulfoxide reductase Daci_3069 3382395 - 3380566 - | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Daci_3070 3382912 - 3382412 - | methionine-R-sulfoxide reductase TERM 2617 3382658 - 3382694 + g 78 -14.4 -3.61715 | gap 1, opp_overlap 3382648 3382649, overlap 3382661 3382672 GAACAGCGGCAGCGC GCAGC-CCGCGCAGGCA AAGG TGCCGGCGCGGTGCTCC TTGTTCAGGGGGCTG TERM 2618 3382661 - 3382691 + g 72 -14.7 -2.93073 | gap 1, opp_overlap 3382648 3382649, overlap 3382658 3382672 CAGCGGCAGCGCGCA GC-CCGCGCAGGCA AAGG TGCCGGCGCGGTGC TCCTTGTTCAGGGGG Daci_3071 3383080 - 3383796 + | two component transcriptional regulator Daci_3072 3383798 - 3385303 + | histidine kinase Daci_3073 3385392 - 3387110 + | ferredoxin-dependent glutamate synthase Daci_3074 3387225 - 3387503 + | hypothetical protein TERM 2619 3388314 - 3388290 - g 86 -3.4 -5.14965 | overlap 3388291 3388294 3388305 3388306 AGCTGCACGAAAAAA TGGAGGCCGA GGAAA CCGGCCTGCC GCACGACCGCGCCGG TERM 2620 3388642 - 3388681 + G 81 -9.8 -4.3587 | gap 1, overlap 3388644 3388645 GCGCTGGCTGTACGT GCTCGGTGGCCTGGCCGGC TGC GCCTGCATTGCCACCG-GC TTTGTCTTCTTCGTG Daci_3075 3387521 - 3389194 + | PepSY-associated TM helix domain-containing protein Daci_3076 3389187 - 3389504 + | hypothetical protein TERM 2621 3389532 - 3389549 + T 74 -6.9 -4.32034 | overlap 3389498 3389533 GACCTCTGCGCCCGC CGCAGGC TCAG GCCTGCC TTTTCCTCATCCTGC Daci_3077 3391806 - 3389539 - | hypothetical protein TERM 2622 3389613 - 3389638 + g 82 -14.7 -3.53012 | CCAGCATGCCGCCCT TGCCCAGGCCG GGAA CGGCCTGGACA TTTCCGGGGCCGGCA TERM 2623 3390516 - 3390484 - G 78 -6.1 -4.56597 | opp_overlap 3390498 GGCCTTCTGGAAAAA GGAAACGCCTTCACC GTT GGGCAGGGCGGTTCC CTGGGGACTGACGCC TERM 2624 3391895 - 3391875 - H 89 -6.7 -5.06451 | CAGGACGTGAAAAAA GCGCTGGCA TTC TGCATGCGC GACGTCTGTGTTCAA TERM 2625 3392975 - 3392992 + G 72 -4.7 -4.43844 | overlap 3392976 CCACGCCCACGACCC ACGCCGG CGAG CCGGTGG TTTTCTGCCTGGTCA Daci_3078 3392245 - 3394569 + | histidine kinase Daci_3079 3394574 - 3395785 + | response regulator receiver modulated diguanylate phosphodiesterase TERM 2626 3396777 - 3396792 + G 78 -6.1 -4.56597 | GACCGGCTACTACCA GGTGG ACTACG CCACC TTTTTCCAGGGCCGG TERM 2627 3398723 - 3398703 - g 75 -4.6 -4.56597 | gap 1, overlap 3398705 GTTCGCGCCGAAAAA GC-GGCTCC GCCC GGCGCCTGC CCAGGCCGATACCCC Daci_3080 3395806 - 3399072 + | histidine kinase Daci_3081 3399091 - 3399744 + | two component LuxR family transcriptional regulator Daci_3082 3400015 - 3399770 - | hypothetical protein Daci_3083 3400389 - 3400009 - | hypothetical protein TERM 2628 3400505 - 3400489 - H 72 -11.5 -3.31726 | overlap 3400487 TGTGCGCACACAACA GCGGCGC ACA ACGCCGC ACAGGAGATGCATCA TERM 2629 3402657 - 3402619 - g 75 -4.6 -4.57073 | gap 3, opp_overlap 3402631 CAGCCCCGGCAAAAA CGGCCGCCGCCAAGCC-CG TCGC CATGGCCTG-CA-CGGCCG ATGACGACTGGGACA Daci_3084 3400521 - 3402680 + | methyl-accepting chemotaxis sensory transducer TERM 2630 3402862 - 3402886 + G 100 -21.5 -4.63218 | GCGCTGGTGGCCCAA CGTGCCCTGGC CCT GCCAGGGCACG TTTTCTTCCAGCACC Daci_3085 3402814 - 3403098 + | hypothetical protein Daci_3086 3403797 - 3403138 - | hypothetical protein Daci_3087 3404860 - 3403907 - | prophage antirepressor TERM 2631 3404980 - 3404954 - H 89 -12.3 -4.06419 | overlap 3404956 CCCGGCCATAAACAA GACTTGCCCTG GGTTG CAGGGCAAGAC AAAGCGTATGGACGA TERM 2632 3404978 - 3404956 - H 88 -13.5 -3.62695 | overlap 3404954 CGGCCATAAACAAGA CTTGCCCTG GGTTG CAGGGCAAG ACAAAGCGTATGGAC TERM 2633 3406337 - 3406326 - g 79 -7.2 -4.42513 | overlap 3406327 AAGGACAAAGACAAA GGCC GCAG GGCC AAGTCTGCTGCAGTT Daci_3088 3405759 - 3407420 + | hypothetical protein TERM 2634 3407927 - 3407904 - f 77 -14.6 -2.78725 | overlap 3407901 3407921 ACACGCCAGCAAGCA CCGACGCCGT CCCA ACAGCGTCGG CCACGGGGCCATGCA Daci_3089 3408065 - 3408754 + | peptidase S1 and S6 chymotrypsin/Hap Daci_3090 3409778 - 3410221 + | transposase IS3/IS911 family protein Daci_3091 3410197 - 3410547 + | IS66 Orf2 family protein Daci_3092 3410649 - 3412244 + | transposase IS66 Daci_3093 3413081 - 3412278 - | yecA family protein Daci_3094 3413611 - 3413273 - | transposase, IS4 family protein Daci_3095 3414096 - 3413671 - | putative TIS1421-transposase orfA protein Daci_3096 3414557 - 3415249 + | hypothetical protein Daci_3097 3415320 - 3416198 + | N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD TERM 2635 3416226 - 3416210 - f 77 -11.5 -3.58343 | overlap 3416195 3416193 CTGAGCACCGTGAAA GCGCGGA CTC CCCGCGC CTTCACAACTACAGA Daci_3098 3416287 - 3416580 + | hypothetical protein Daci_3099 3417997 - 3417017 - | AraC family transcriptional regulator TERM 2636 3417283 - 3417264 - G 76 -7.1 -4.36914 | CCGCTGGCGACAAAA TGCGCGG GGACTT CCACGCA GGCGTCATAGCGGCA TERM 2637 3417593 - 3417624 + g 95 -15 -4.26903 | overlap 3417594 ATTGCTCTGCTGGCT GCCTGGCGGCTGCC CGAT GGCGGCCGCCTGGG TTTTCATCCGCTCAA TERM 2638 3417594 - 3417623 + g 86 -18.5 -3.1582 | overlap 3417593 TTGCTCTGCTGGCTG CCTGGCGGCTGCC CGAT GGCGGCCGCCTGG GTTTTCATCCGCTCA TERM 2639 3417798 - 3417819 + g 73 -10.1 -3.89822 | TTCTCGAGCCGTCGG CGCTGCGCA TAGC TGCCCAGCG TTTCTCCCATCCATG Daci_3100 3418412 - 3418089 - | HxlR family transcriptional regulator TERM 2640 3418512 - 3418538 + H 73 -10.2 -3.67597 | gap 1, overlap 3418512 GCATGACATTGGCCA GGGG-CTGTGC CTGAAC GCACAGGCCCC TTGTTCCATCACCAG Daci_3101 3418563 - 3419195 + | glutathione S-transferase domain-containing protein Daci_3102 3420337 - 3419327 - | hypothetical protein TERM 2641 3420356 - 3420400 + r 87 -17.2 -3.06492 | gap 2, overlap 3420358 CGCTGTCTCCGGTTG ACGG-GGGTGGGCGGGAC-CCG CCG CGGCGTCCTGCCCACCCGCTGG TCTTCAGGTCAATGG TERM 2642 3420358 - 3420397 + r 100 -22.2 -2.75074 | gap 1, overlap 3420356 CTGTCTCCGGTTGAC GGGGGTGGGCGGGAC-CCG CCG CGGCGTCCTGCCCACCCGC TGGTCTTCAGGTCAA Daci_3103 3421722 - 3420409 - | hypothetical protein Daci_3104 3422737 - 3422246 - | LuxR family transcriptional regulator TERM 2643 3423319 - 3423342 + r 76 -9.6 -4.07687 | overlap 3423322 CGGCTGGGTGCCTGC GATGTGCTTC AAGG GAAGCACCTC TTTTGCCAAAAGCGT Daci_3105 3423970 - 3423428 - | MarR family transcriptional regulator Daci_3106 3424032 - 3424931 + | hypothetical protein Daci_3107 3424977 - 3425612 + | nitroreductase Daci_3108 3425688 - 3426311 + | deaminase-reductase domain-containing protein Daci_3109 3426304 - 3426921 + | TetR family transcriptional regulator Daci_3110 3427360 - 3427001 - | hypothetical protein Daci_3111 3427571 - 3428065 + | nickel responsive regulator Daci_3112 3428150 - 3430213 + | TonB-dependent receptor TERM 2644 3430516 - 3430527 + G 71 -2.2 -4.57073 | CTGCTGGCCGCGCAT TTCG ACAA CGGA TTTTTCAGCCGCGTG Daci_3113 3430225 - 3430941 + | putative cobalt transport system, periplasmic-binding protein Daci_3114 3432017 - 3430995 - | hypothetical protein TERM 2645 3431695 - 3431751 + g 75 -10.6 -4.07568 | gap 1, overlap 3431696 ACCAGGGTCAGGCCA TCGG-CAGGCGCCTTGGCCGCCGCCTG CAGG CTGATCGCGCCCGAGGCGCCCGGCCGG TTTTCCACCACCACG Daci_3115 3433336 - 3432014 - | cerebroside-sulfatase Daci_3116 3433486 - 3434382 + | LysR family transcriptional regulator Daci_3117 3435738 - 3434440 - | D-amino acid dehydrogenase small subunit Daci_3118 3435853 - 3436338 + | AsnC family transcriptional regulator Daci_3119 3436671 - 3437900 + | hypothetical protein Daci_3120 3438786 - 3437926 - | metallophosphoesterase Daci_3121 3439834 - 3438773 - | ABC transporter related TERM 2646 3438956 - 3438928 - G 72 -6.6 -4.2558 | gap 1, overlap 3438929 GATCGCCCAGGAAAA CGCGGCGCGCCAC CGAT GCGG-GCACGGCG CCCGGCGTGCCGGCG Daci_3122 3440708 - 3439824 - | binding-protein-dependent transport systems inner membrane component TERM 2647 3440584 - 3440564 - G 72 -13.3 -3.17051 | opp_overlap 3440583, overlap 3440562 3440565 GCGCCAGCATGAACA CGGTGACGG TGG CCGTCACCA GCCACATCAGCGGCG TERM 2648 3440655 - 3440635 - G 90 -9.6 -4.74103 | GCCCCAAGGCAAAAA GCGGCCCC TTCGG GGGGCAGC GGACCTTGCGCTGCA TERM 2649 3440655 - 3440688 + g 100 -5.1 -5.74122 | overlap 3440657 3440659 CCCTTCGGGGGGCAG CGGACCTTGCGCTGC AAGG GCAGCGTGGGGGCTA TTTTTTTGTGTGGTC TERM 2650 3440657 - 3440686 + g 84 -9.9 -4.50122 | overlap 3440655 3440659 CTTCGGGGGGCAGCG GACCTTGCGCTGC AAGG GCAGCGTGGGGGC TATTTTTTTGTGTGG Daci_3123 3441568 - 3440711 - | binding-protein-dependent transport systems inner membrane component TERM 2651 3441516 - 3441470 - G 78 -14.4 -3.62522 | gap 2, overlap 3441458 3441471 GAACGCGGCGAAGAA GGCCACGGCCGGCGCGCTGCAG GCCAG CAGCAGCGCGCGGG-CGCG-CC AGTCGCCTGGCGCTT TERM 2652 3441516 - 3441471 - G 70 -14.6 -2.77192 | gap 1, overlap 3441458 3441470 AACGCGGCGAAGAAG GCCACGGCCGGCGCGCTGCAG GCCAG CAGCAGCGCGCGGG-CGCGCC AGTCGCCTGGCGCTT Daci_3124 3442602 - 3441565 - | extracellular solute-binding protein TERM 2653 3442279 - 3442296 + g 73 -10.5 -3.87994 | GTTGGCGGGCTTGTA GGCGGCG ACCA CGCCGTC TTTCTGCGCCTGGAT Daci_3125 3443596 - 3442682 - | LacI family transcription regulator TERM 2654 3442734 - 3442749 + g 71 -2.5 -4.63218 | overlap 3442735 GGCAGGCACAGGCTT TCCTG CGCGGC CAGGG TTTTCTTGCCCGCCA TERM 2655 3443560 - 3443580 + g 85 -16.9 -3.60792 | CCACTTCCTGCGCCA CGCGCAGCA CCG TGCTGCGCG TTTGCGCATTGACCA Daci_3126 3444649 - 3443759 - | LysR family transcriptional regulator Daci_3127 3444678 - 3445769 + | hypothetical protein Daci_3128 3445788 - 3446741 + | intradiol ring-cleavage dioxygenase Daci_3129 3446755 - 3447555 + | 2-oxo-hepta-3-ene-1,7-dioic acid hydratase Daci_3130 3448374 - 3447577 - | DNA polymerase beta subunit TERM 2656 3449301 - 3449243 - g 71 -11.8 -3.54902 | gap 4, opp_overlap 3449259, overlap 3449244 TCAGGCAAGAAGGAA GGCGGGCAGGGCAGTGCGCCCAGCATCGGC ATG GGCG-TGCTGTGCGCCCTGC--TGCCCGC- GCTGCTGATGCTGGT TERM 2657 3449301 - 3449244 - g 78 -17.8 -2.72459 | gap 3, opp_overlap 3449259, overlap 3449243 CAGGCAAGAAGGAAG GCGGGCAGGGCAGTGCGCCCAGCATCGGC ATG GGCG-TGCTGTGCGCCCTGC--TGCCCGC GCTGCTGATGCTGGT Daci_3131 3448544 - 3449932 + | gluconate transporter TERM 2658 3450578 - 3450564 - g 71 -2.8 -4.57837 | overlap 3450565 3450566 ACACCGGCGGAAAAA TGCG CAAGCAC CGCA TCCGCGTGCTGGCCG Daci_3132 3450446 - 3450709 + | translation initiation factor IF-1 Daci_3133 3451181 - 3450867 - | pentapeptide MXKDX repeat-containing protein Daci_3134 3452078 - 3451287 - | oxidoreductase molybdopterin binding Daci_3135 3452728 - 3452075 - | thiosulfate reductase cytochrome b subunit (membrane anchoring protein) Daci_3136 3453721 - 3452798 - | LysR family transcriptional regulator Daci_3137 3453836 - 3454789 + | pyruvate carboxyltransferase TERM 2659 3454964 - 3454989 + G 72 -3.9 -4.58283 | gap 1, overlap 3454967 GCGGAGACAAAACGC GCACGCTGCCTG GCC TGGGCATCG-GC TTTTTCCGCAGCTTC TERM 2660 3455043 - 3455021 - g 79 -2.7 -4.90079 | gap 1, overlap 3455022 3455023 3455039 ACCGCAACAAGAAAA GCGTGGTGCT GGAC ATCACCAC-C GAAGCGGGCCGCGCC Daci_3138 3454786 - 3455964 + | L-carnitine dehydratase/bile acid-inducible protein F TERM 2661 3456041 - 3456030 - f 84 -3.6 -5.1764 | GAGACAACACAAAAA GGAG ACAA CCCC ATGCACTCGTCCCAT Daci_3139 3456042 - 3457025 + | hypothetical protein Daci_3140 3457228 - 3457539 + | hypothetical protein Daci_3141 3457536 - 3457946 + | hypothetical protein Daci_3142 3458019 - 3458474 + | hypothetical protein TERM 2662 3458482 - 3458505 + F 85 -16.7 -2.87132 | AGCAGTGATCGCGTG GCCCGGCGG GCCACG CCGCCGGGC TGTCTGCAACCCCAC Daci_3143 3458558 - 3459490 + | intradiol ring-cleavage dioxygenase TERM 2663 3459798 - 3459852 + G 79 -11.3 -4.07568 | gap 1 TTCCTGCGGGCGAGC CCGGGCCACGGCCCC-CCATGCCCAT GCCC ATGCCCATGCCGGAGCCGAGGCCTGG TTTTGAGGGAAGCCA Daci_3144 3459503 - 3461152 + | histidine kinase TERM 2664 3461772 - 3461746 - g 78 -10.1 -4.15788 | opp_overlap 3461746 AACCTGCGCAAGAAA CTCAAGGCGGC GGACG ACCGCCATGAG TGGATTCGCTCCGTC Daci_3145 3461149 - 3461844 + | two component transcriptional regulator Daci_3146 3463182 - 3461872 - | NtaA/SnaA/SoxA family monooxygenase Daci_3147 3465337 - 3463202 - | TonB-dependent receptor Daci_3148 3465509 - 3466300 + | IclR family transcriptional regulator Daci_3149 3467146 - 3466331 - | ABC transporter related Daci_3150 3467197 - 3468285 + | iron-enterobactin transporter periplasmic binding protein Daci_3151 3468289 - 3469353 + | transport system permease protein Daci_3152 3469350 - 3470390 + | transport system permease protein Daci_3153 3470809 - 3470438 - | hypothetical protein TERM 2665 3470901 - 3470887 - H 71 -5.7 -4.4009 | overlap 3470895 CTGCAGGCTAGAAAA CTACG CAACT CGTAG TATCGAGAATACAGC Daci_3154 3470953 - 3471261 + | XRE family transcriptional regulator Daci_3155 3472349 - 3471357 - | HNH endonuclease TERM 2666 3471673 - 3471687 + g 91 -3.4 -5.45802 | GGGTTGCTGTTGCCT GCTGGC TTG GCTTGC TTTTTGTTTTCCAGG Daci_3156 3473904 - 3472567 - | hypothetical protein Daci_3157 3474949 - 3475425 + | Ypar31 protein Daci_3158 3475952 - 3475506 - | hypothetical protein Daci_3159 3477139 - 3477357 + | hypothetical protein TERM 2667 3477385 - 3477429 + G 90 -10.1 -4.71426 | overlap 3477387 3477388 CTTTCCTCCTGGGCG TGGCTTTCGGGCTGGGAAT CATCAGT ATTCCCAGCCCCAAGGATA TTTTCTTCATCAAGA TERM 2668 3477387 - 3477427 + G 75 -10.5 -3.97413 | overlap 3477385 3477388 TTCCTCCTGGGCGTG GCTTTCGGGCTGGGAAT CATCAGT ATTCCCAGCCCCAAGGA TATTTTCTTCATCAA TERM 2669 3477513 - 3477528 + G 72 -3.2 -4.62783 | GATGCAGTTCTGATT GCGGTG GGGA CATTGC TTTTTGGAATGACTA Daci_3160 3477354 - 3477962 + | hypothetical protein Daci_3161 3478938 - 3478003 - | LysR family transcriptional regulator Daci_3162 3479020 - 3480039 + | hypothetical protein Daci_3163 3480130 - 3481134 + | hypothetical protein TERM 2670 3481450 - 3481471 + G 71 -2.9 -4.56597 | GCTGGGCGTGACCCT GCTGCAC CGCACGAC GCGCAGC TTTTTGCCGACGGCG TERM 2671 3481960 - 3481918 - g 71 -2.5 -4.56597 | gap 1, overlap 3481932 CGTCTCGGTGAAAAA GGGGCAGCAGGAGATTGCAC TCAA GTGCGAGC-CCTGCATCACC AGCGAGCATTTCCCC Daci_3164 3481235 - 3482224 + | LysR family transcriptional regulator Daci_3165 3483238 - 3482261 - | hypothetical protein TERM 2672 3483283 - 3483314 + r 100 -18 -4.65933 | GGGTTCAGATCTTGC GCTGCGTCGCGCCC CAGT GGGCGTCACGCAGC TTTCTTTTGGCGATC Daci_3166 3484777 - 3483272 - | acyl-CoA synthetase TERM 2673 3483407 - 3483368 - G 74 -13.6 -3.36273 | gap 1, opp_overlap 3483367 3483366 3483368, overlap 3483364 GCGCTGGAAGACGAA GCTGCGCGG-CAGCTTG TAGGCCG CCAGCCGGCCGCGCAGC CATTCTTTCAGTTCC Daci_3167 3485679 - 3484774 - | short-chain dehydrogenase/reductase SDR TERM 2674 3485825 - 3485845 + H 84 -9.7 -4.56597 | overlap 3485827 GTGCAGGGATGCTTA TGGCCACCT GTC GGGTGGCTA TTTTTCGAGGCCGGG TERM 2675 3485827 - 3485843 + H 78 -10.1 -3.90048 | overlap 3485825 GCAGGGATGCTTATG GCCACCT GTC GGGTGGC TATTTTTCGAGGCCG Daci_3168 3486026 - 3487213 + | integrase catalytic region TERM 2676 3487398 - 3487373 - T 78 -14.1 -3.25223 | gap 1, overlap 3487377 GAGTCAGATGACGAA GCAAGCCTGTCC TTC GG-CAGGCTTGC AACCCCGCAACCGCC Daci_3169 3488948 - 3487464 - | gluconate 2-dehydrogenase (acceptor) Daci_3170 3489541 - 3488954 - | 2Fe-2S iron-sulfur cluster binding domain-containing protein Daci_3171 3492459 - 3489538 - | aldehyde oxidase and xanthine dehydrogenase molybdopterin binding TERM 2677 3490926 - 3490960 + g 74 -12.8 -3.61398 | CCAGCACCTCGTCGG CGCGCAGGGCGCCG GCGGCAA TGGCGCCCTGGGTG TTCTTGGCGCCCGAG TERM 2678 3492850 - 3492885 + H 83 -2.5 -5.1861 | gap 1, opp_overlap 3492849 3492848, overlap 3492854 3492873 CACTTCCCAACAATG CGCAGCGGCGTC CCCAGGCCGTCCT G-CGCCGCGGCG TTTTTTCATGATCGA TERM 2679 3493358 - 3493330 - g 75 -10.1 -4.07568 | overlap 3493331 3493333 CTCTGGCGGGCAAAA GCAGCGCGTGGGC ATT GCGCGCGCGCTGG CCAGCCACCCCAAGG Daci_3172 3492893 - 3493939 + | ABC transporter related Daci_3173 3493943 - 3494608 + | binding-protein-dependent transport systems inner membrane component TERM 2680 3494649 - 3494617 - f 75 -13.4 -2.91264 | gap 2, opp_overlap 3494644 CCGCTGATCCACACA CCCCGGC-G-GCCGGC GCG GCTGGCGCGGCCGGGG CGGCAAGCTGCCGCG Daci_3174 3494688 - 3495497 + | YaeC family lipoprotein Daci_3175 3495502 - 3496032 + | acireductone dioxygenase ARD Daci_3176 3496029 - 3497129 + | hypothetical protein TERM 2681 3497160 - 3497141 - T 100 -10.7 -5.1287 | opp_overlap 3497141 CTGAGATGCAAAAAA GCCTGGC GCGAGA GCCAGGC TTTTTTGTGATGGGA TERM 2682 3497141 - 3497160 + T 100 -10.7 -5.31275 | opp_overlap 3497141 CTGAGATGCAAAAAA GCCTGGC GCGAGA GCCAGGC TTTTTTGTGATGGGA Daci_3177 3498232 - 3497189 - | bile acid:sodium symporter Daci_3178 3498351 - 3499268 + | LysR family transcriptional regulator Daci_3179 3500616 - 3499243 - | D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit TERM 2683 3500638 - 3500659 + r 72 -10.9 -3.29144 | gap 1, overlap 3500641 AGCCCTCCATCACCG CATGCCGCAG GTG CTGCGGC-TG TTGTGCCAGCAGTGC TERM 2684 3500641 - 3500657 + r 78 -13.7 -3.21395 | overlap 3500638 CCTCCATCACCGCAT GCCGCAG GTG CTGCGGC TGTTGTGCCAGCAGT Daci_3180 3501589 - 3500621 - | ribokinase-like domain-containing protein Daci_3181 3502696 - 3501650 - | monosaccharide-transporting ATPase Daci_3182 3504249 - 3502693 - | ABC transporter related TERM 2685 3503361 - 3503338 - G 76 -3.1 -4.7173 | CACCAGACCGAAAAA GCCCACG ATCTCGCCCG CGTGGAC CTCGAAGTCAATGCC Daci_3183 3505202 - 3504276 - | periplasmic binding protein/LacI transcriptional regulator Daci_3184 3506046 - 3505237 - | DeoR family transcriptional regulator TERM 2686 3505381 - 3505420 + g 70 -12.8 -3.25719 | gap 1 GCAGACCGGGTGCCC GCCCGTGGTGCT-GTCCAG ATC CAGGGCCAGCGCCACGGCC TTGGTGCTGTGCTCC TERM 2687 3506052 - 3506066 + r 100 -8.6 -5.69793 | overlap 3506052 GGTCCTGCATGGATT CTTTCG ATT CGAAAG TTTTTTATTTCGTGT Daci_3185 3506888 - 3506157 - | glutamine amidotransferase class-I TERM 2688 3507052 - 3507033 - R 100 -15 -4.74103 | opp_overlap 3507033 GGCCCAACGCAAAAA GGCGCCAC GGCC GTGGCGCC TTTGATGGTGGCAAC TERM 2689 3507033 - 3507052 + r 93 -15 -3.78775 | opp_overlap 3507033 GGCCCAACGCAAAAA GGCGCCAC GGCC GTGGCGCC TTTGATGGTGGCAAC Daci_3186 3509132 - 3507072 - | hypothetical protein Daci_3187 3510408 - 3509506 - | hypothetical protein TERM 2690 3510283 - 3510271 - G 72 -9.1 -4.07133 | overlap 3510273 CAGGCCCACAAAGAA CAGCG GCC CGCTG TGCTGCATGGCCAGG TERM 2691 3510618 - 3510592 - g 77 -15.2 -3.19602 | overlap 3510590 3510593 3510595 GCGGCGACACCAACA TCAGCCTGTCCA GCC TGGACAGGCTGG CCGATGCGCTGGGCG TERM 2692 3510617 - 3510593 - g 79 -18.7 -2.51547 | overlap 3510592 3510590 3510595 CGGCGACACCAACAT CAGCCTGTCCA GCC TGGACAGGCTG GCCGATGCGCTGGGC TERM 2693 3510615 - 3510595 - g 70 -15.5 -2.79321 | overlap 3510593 3510592 3510590 GCGACACCAACATCA GCCTGTCCA GCC TGGACAGGC TGGCCGATGCGCTGG Daci_3188 3510423 - 3510992 + | XRE family transcriptional regulator Daci_3189 3512388 - 3511228 - | hypothetical protein TERM 2694 3511649 - 3511602 - G 83 -8.3 -4.66537 | opp_overlap 3511622 TGCCGCAACAGAAAA CCGGACCGGCGCCAGCCA-GCGA CGGG TCGCCCGACATGTGCCGG-CCGG CCTGCCTGTGGTGTG Daci_3190 3513016 - 3512381 - | aspartyl/asparaginyl beta-hydroxylase Daci_3191 3513699 - 3513013 - | adenylyl-sulfate kinase TERM 2695 3513900 - 3513917 + H 72 -2.7 -4.83593 | TGTGGTTTTGGTGGT TATCAGC GAAT GCTTATA TTTTTCATGATTCTT TERM 2696 3515069 - 3515105 + G 76 -7.8 -4.37067 | gap 1, overlap 3515071 GGGCCAAGGTGTGGT GGGCGTCGGCCTGGGGC AAGC GGCCC-GGCAGGCGCGC TTTTGGTGGTATTTC Daci_3192 3514419 - 3515660 + | major facilitator transporter TERM 2697 3515673 - 3515698 + F 76 -8.9 -4.12603 | opp_overlap 3515674, overlap 3515674 TGATCCAACGAAAAA ACCCCTGGCTC TTGC GAACCAGGGGC TTCTTGTTTGGTGCC TERM 2698 3515674 - 3515697 + F 72 -12.4 -3.06839 | opp_overlap 3515674, overlap 3515673 GATCCAACGAAAAAA CCCCTGGCTC TTGC GAACCAGGGG CTTCTTGTTTGGTGC TERM 2699 3515697 - 3515674 - f 100 -14.6 -5.28481 | opp_overlap 3515673 3515674 GATCCAACGAAAAAA CCCCTGGCTC TTGC GAACCAGGGG CTTCTTGTTTGGTGC Daci_3193 3515861 - 3516958 + | integrase family protein Daci_3194 3517528 - 3517136 - | hypothetical protein TERM 2700 3517563 - 3517547 - R 100 -10.8 -4.86731 | opp_overlap 3517548 GTTCTCCAAAGAAAA GCCCCG ACTAG CGGGGC TGGGGTTGGTCATAC Daci_3195 3518010 - 3517573 - | hypothetical protein TERM 2701 3518048 - 3518033 - R 100 -11.8 -4.98531 | opp_overlap 3518028 3518033 CCCTCAAATGAAAAA GCCCGC TGGT GCGGGC TCTGGTTGCTGGTCC Daci_3196 3518331 - 3518092 - | hypothetical protein Daci_3197 3519141 - 3518752 - | hypothetical protein Daci_3198 3519587 - 3519138 - | hypothetical protein Daci_3199 3520021 - 3519668 - | hypothetical protein TERM 2702 3519880 - 3519893 + g 75 -4.5 -4.56597 | opp_overlap 3519874 3519871 CCAGAACCACACCGC TGGTG ATGT CGCCA TTTTTGAGGCGGACG Daci_3200 3520547 - 3520023 - | pathogenesis-related transcriptional factor and ERF protein Daci_3201 3521243 - 3520743 - | pathogenesis-related transcriptional factor and ERF protein Daci_3202 3522400 - 3521240 - | hypothetical protein TERM 2703 3522535 - 3522512 - R 100 -13.8 -4.89838 | TGAAGAAACAGAAAA GCCCTCGCGG CATA CCGGGAGGGC TTCGGGGGAGGGGAG Daci_3203 3523139 - 3522747 - | hypothetical protein Daci_3204 3523885 - 3523106 - | hypothetical protein Daci_3205 3524637 - 3523888 - | ERF family protein Daci_3206 3525284 - 3525090 - | hypothetical protein Daci_3207 3525688 - 3525281 - | hypothetical protein Daci_3208 3526067 - 3525690 - | hypothetical protein TERM 2704 3526037 - 3526020 - G 73 -9.8 -3.92659 | opp_overlap 3526020, overlap 3526014 TCCTGAAAAGCGAAA CCCGCC GGGAGG GGCGGG TTCTGTGGGGAGTTG TERM 2705 3526340 - 3526360 + r 81 -5.3 -4.82091 | overlap 3526343 GCGGTACTCGCGCGC CAAGCTTCC GGG GGATGCGTG TTTCTTTGTTTGCTT Daci_3209 3526730 - 3526386 - | hypothetical protein TERM 2706 3526424 - 3526449 + g 79 -7.5 -4.40358 | gap 1, overlap 3526426 3526427 CCAGCGCCTGGGGTT G-TTGGGCGAGC GCG GCTCGCCCGTTC TTTTCTGCGATGCGT TERM 2707 3526426 - 3526446 + g 95 -14.7 -4.32067 | overlap 3526424 3526427 AGCGCCTGGGGTTGT TGGGCGAGC GCG GCTCGCCCG TTCTTTTCTGCGATG TERM 2708 3526427 - 3526445 + g 80 -16 -3.18517 | overlap 3526426 3526424 GCGCCTGGGGTTGTT GGGCGAGC GCG GCTCGCCC GTTCTTTTCTGCGAT Daci_3210 3527016 - 3526723 - | hypothetical protein Daci_3211 3527411 - 3527013 - | hypothetical protein TERM 2709 3527469 - 3527451 - R 100 -12.4 -5.04601 | GCCAGAAACGAAAAA GGCCCTGC ATT GCAGAGCC TGGGTGTAAAGAGCC Daci_3212 3527859 - 3527638 - | hypothetical protein TERM 2710 3527822 - 3527845 + g 70 -8.9 -3.93236 | gap 1, opp_overlap 3527820 TCCTTCAGGAAAGGG CGCAGCAGGT CGGCA ACCTGC-GCG TTTATGGACTTCATC Daci_3213 3528298 - 3527903 - | hypothetical protein TERM 2711 3528351 - 3528318 - R 84 -9.5 -4.56597 | opp_overlap 3528318 3528323 GCTCCTGTTGAAAAA CCGAAGGCGCCGCAA CGGG TCATGGCGCCTTTGG TTCTGCCCCTGTGCG Daci_3214 3528722 - 3528381 - | hypothetical protein TERM 2712 3528775 - 3528749 - R 100 -11.6 -5.00616 | opp_overlap 3528749 3528753 TGGTGGTTGAAAAAA CGAAGCGCACTC GGC GAATGCGCTTTG GTCTTTCCCCTGTTT TERM 2713 3528753 - 3528771 + r 76 -8.8 -4.00934 | opp_overlap 3528749, overlap 3528749 GGTTGAAAAAACGAA GCGCACTC GGC GAATGCGC TTTGGTCTTTCCCCT TERM 2714 3529367 - 3529383 + r 77 -11.5 -3.67611 | opp_overlap 3529367 CCCGGGCGCAAAAAA GCCCCGT CGT GCGGGGC TTGTGTTGGGGTGGG TERM 2715 3529383 - 3529367 - R 100 -10.8 -5.00616 | opp_overlap 3529367 CCCGGGCGCAAAAAA GCCCCG TCGTG CGGGGC TTGTGTTGGGGTGGG TERM 2716 3529731 - 3529715 - R 89 -10.8 -4.72272 | opp_overlap 3529715 3529713 3529711 3529708 GCCGGGCATGAAAAA GCCCGC TCGGG GCGGGC TCTATTCGTTCTCTA Daci_3215 3531176 - 3530748 - | hypothetical protein TERM 2717 3530804 - 3530815 + g 86 -5.8 -5.03314 | overlap 3530777 3530778 GGACCAAGAGTCCAG TGCG CCAG CGCA TTTTTTCCACGTCAA Daci_3216 3531784 - 3531197 - | hypothetical protein Daci_3217 3532527 - 3531817 - | putative phage repressor TERM 2718 3533725 - 3533713 - H 84 -6.2 -4.91511 | opp_overlap 3533714 3533719, overlap 3533715 ACGCGATGAGAAAAA GCCC GCGCA GGGC CCTATTGGGCGACTG TERM 2719 3534015 - 3533977 - H 78 -13.3 -3.14321 | gap 1, opp_overlap 3533983, overlap 3533983 ATGAAAGGGCAAAAG CAAAAACGCCTGC-AGCT GGAG AGCTAGCAGGCGTTCTAG GAGTCTGGTCTCGGG TERM 2720 3533983 - 3534009 + H 76 -13.1 -3.32521 | gap 1, opp_overlap 3533977 3533983 GGGCAAAAGCAAAAA CGCCTGC-AGCT GGAG AGCTAGCAGGCG TTCTAGGAGTCTGGT TERM 2721 3534009 - 3533983 - H 100 -13.1 -5.0925 | gap 1, opp_overlap 3533983, overlap 3533977 GGGCAAAAGCAAAAA CGCCTGC-AGCT GGAG AGCTAGCAGGCG TTCTAGGAGTCTGGT TERM 2722 3534244 - 3534262 + G 82 -6 -4.70659 | TTGGAGGACCGTCCA CTTCGG ATCAAGG CCGAAG TTTTTCCGTATCGAG Daci_3218 3534109 - 3534660 + | hypothetical protein Daci_3219 3534653 - 3535453 + | hypothetical protein Daci_3220 3535450 - 3536820 + | DnaB domain-containing protein Daci_3221 3536823 - 3537536 + | hypothetical protein TERM 2723 3537584 - 3537559 - g 84 -8.1 -4.72729 | overlap 3537553 CAAGCAAAAGCAAAA GCTCGCCGGCC AGAC GGCCATCGCGC AGAAGGTGTTCCAGG Daci_3222 3537533 - 3538018 + | hypothetical protein Daci_3223 3538317 - 3538619 + | hypothetical protein Daci_3224 3538616 - 3539086 + | hypothetical protein Daci_3225 3539430 - 3539735 + | hypothetical protein Daci_3226 3539728 - 3540126 + | hypothetical protein Daci_3227 3540123 - 3540641 + | hypothetical protein TERM 2724 3541067 - 3541077 + G 72 -8.2 -4.08974 | CTGTGCCAGATCTTT GGCG AGT CGCC TTTCTCTGGTGAGGT Daci_3228 3540641 - 3541138 + | hypothetical protein Daci_3229 3541138 - 3541734 + | lambda NinG family protein Daci_3230 3541731 - 3542174 + | hypothetical protein TERM 2725 3542318 - 3542337 + F 73 -9.2 -3.85698 | opp_overlap 3542316 3542315 3542331 CGAGATGGACAAGCG CGCCCGGA GAAA TCGGGGCG TTTATCCCGCACGCC TERM 2726 3542635 - 3542660 + F 100 -13.3 -4.82128 | opp_overlap 3542635 AACGTTGCCACCAAA GCCTCGATTGC TCGC GCAGTCGGGGC TTTTCTGTTTCATCC TERM 2727 3542660 - 3542635 - f 71 -8.9 -3.73072 | opp_overlap 3542635 AACGTTGCCACCAAA GCCTCGATTGC TCGC GCAGTCGGGGC TTTTCTGTTTCATCC TERM 2728 3542814 - 3542833 + F 100 -12.8 -4.54727 | opp_overlap 3542814 3542813 3542811 GGTGACTATCAACAC GGCCTCGC TGAC GCGGGGCC TTTTCGTTTCCGCCA Daci_3231 3542928 - 3543269 + | hypothetical protein Daci_3232 3543480 - 3543722 + | hypothetical protein Daci_3233 3544115 - 3543738 - | hypothetical protein Daci_3234 3544141 - 3544773 + | hypothetical protein Daci_3235 3544804 - 3545268 + | hypothetical protein Daci_3236 3545255 - 3546541 + | hypothetical protein TERM 2729 3546549 - 3546571 + F 71 -7.7 -4.13648 | gap 1 GCATGTGAAAACAGG CCTGCC-CCA GCAA TGGAGGCGGG TTTCTCTATGGCATT TERM 2730 3546909 - 3546866 - g 71 -11 -3.62046 | gap 1, opp_overlap 3546866 CGACCTGTGCAACAA CATCGATGGCGAAGGC-CGCA GCC TGCATGCCTTCGCTTCCGACG TGTTCGACCATTCGG Daci_3237 3546561 - 3547958 + | hypothetical protein Daci_3238 3547958 - 3549067 + | hypothetical protein Daci_3239 3549077 - 3549397 + | hypothetical protein TERM 2731 3549404 - 3549421 + F 100 -9.8 -4.85782 | opp_overlap 3549401 3549404 GTGAAATGACAACCA GCCCGC CGCCGT GCGGGC TTTCTTTTTCACCGC TERM 2732 3549435 - 3549460 + F 100 -13.9 -4.57073 | opp_overlap 3549401 GCTTTCTTTTTCACC GCCCGCCCGGC GCAA GTCTGGCGGGC TTTTTCACGCCCGTC Daci_3240 3549549 - 3550283 + | hypothetical protein TERM 2733 3551102 - 3551081 - g 84 -8 -4.67904 | overlap 3551072 CACCAACGGCAAAAA CCGCATCG AGACCA CGATGCAG GCCGACTACACCTTC Daci_3241 3550302 - 3551270 + | hypothetical protein Daci_3242 3551270 - 3551569 + | hypothetical protein Daci_3243 3551572 - 3551988 + | hypothetical protein Daci_3244 3552336 - 3552701 + | hypothetical protein TERM 2734 3553016 - 3553003 - g 71 -2.4 -4.56597 | CGGGCGCTTCAAAAA CAAC TGGCAG GTTG GGATCGGGTTCATCA Daci_3245 3552701 - 3553270 + | hypothetical protein Daci_3246 3553267 - 3553671 + | hypothetical protein TERM 2735 3553694 - 3553709 + F 100 -6.8 -5.60993 | AATCTGAAAAGTTGA GCTACC TCCG GGTGGC TTTTTTTGTGCCCGC TERM 2736 3553739 - 3553754 + G 100 -11.8 -4.8622 | opp_overlap 3553738 CGAGGGCGTACACAT GCCCGC GACT GCGGGC TTTTTCATTGAAAGG Daci_3247 3553737 - 3554423 + | tail protein 3 TERM 2737 3554435 - 3554489 + F 93 -15.2 -3.98661 | gap 3 CTGATCGGCCCCAGT TGCACCG-GCCCGGCTGTTTCGTCTCT CAGC AGAGGCG-GGCAGTCGGGCGCGG-GCA TTTCTCCTCCATCTG Daci_3248 3554521 - 3554967 + | hypothetical protein TERM 2738 3555006 - 3555020 + G 79 -11.4 -4.09685 | CGCAAGCCGCCGACA GCCGAG CAA CTCGGC TTTTGGGGCATGACA Daci_3249 3554964 - 3555281 + | hypothetical protein TERM 2739 3555298 - 3555283 - f 82 -11.8 -3.92324 | opp_overlap 3555283 3555282 TGCGCGAAGAGTAAA GCCGCC CGAG GGCGGC CTTTGAATTTCCGGA Daci_3250 3555320 - 3555712 + | hypothetical protein Daci_3251 3556028 - 3555669 - | hypothetical protein TERM 2740 3556093 - 3556124 + r 70 -10.8 -3.54741 | gap 1, overlap 3556105 AGGAGGGCAACCGGG CCCGGGG-CGTCGGT CTG GCCGACGGCCTCGCG TTTCCCGAGGTCATG TERM 2741 3556232 - 3556218 - R 100 -12.8 -4.58395 | opp_overlap 3556217 CCCAGGCGCGAAAAA GCCCGC TGG GCGGGC CTTGAATCCATAGGG Daci_3252 3556463 - 3556248 - | Arc domain-containing protein TERM 2742 3556763 - 3556736 - g 81 -10.6 -4.32046 | GCCTGAAAAAGGAAA CGCCCCTGGA TGTAGGAG TCCAGAGGCG TCGAGTGAAGAAGCC Daci_3253 3556710 - 3557489 + | KilA domain-containing protein TERM 2743 3557663 - 3557641 - g 76 -13.5 -3.45023 | TGACGACGATGAGAA GGGTCTGCA GGTTT TGCAGACCC AAGGCGGAACCCAGC Daci_3254 3557486 - 3558298 + | prophage antirepressor TERM 2744 3558331 - 3558382 + F 76 -13.3 -3.05463 | gap 2, opp_overlap 3558321 3558329, overlap 3558335 AGAATGCAGAGCAGG TGATGCGCTACCATCCCCTTCAAGT CATC ACTTGGAGGGGATA-TGGCGC-TCA TTGCCTGCACAGAAT TERM 2745 3558335 - 3558379 + F 77 -15.2 -2.75064 | gap 1, opp_overlap 3558321 3558329, overlap 3558331 TGCAGAGCAGGTGAT GCGCTACCATCCCCTTCAAGT CATC ACTTGGAGGGGATA-TGGCGC TCATTGCCTGCACAG TERM 2746 3558521 - 3558507 - f 70 -4.2 -4.56133 | opp_overlap 3558508 3558509, overlap 3558508 GCCGAAGAAGGAAAA GTCCAG CGT CTGGAA GTGGGTGCTGGGTGT TERM 2747 3558772 - 3558785 + F 100 -9.5 -5.626 | opp_overlap 3558772 TTTTGAATGACGAGA CCCGC TTCG GCGGG TTTTTTTATGGGCTC TERM 2748 3558796 - 3558815 + F 100 -12.8 -5.4505 | GCGGGTTTTTTTATG GGCTCGCC AGTA GGCGGGCC TTTTTTATTGGCGAG TERM 2749 3560204 - 3560160 - g 81 -2.3 -5.03314 | gap 3, opp_overlap 3560177 3560189, overlap 3560161 CTGATGCCGAAAAAA TCGCAGCCATGCAGCAGCAGGA GTCT TCCCG-TG-TA-ATGGCTGCGC GTCTTGCCTTCGACA TERM 2750 3561728 - 3561706 - g 82 -3.3 -5.03945 | GAAGAAGTACAAAAA CCGGGAC ATGGACAGG GACCCGG AGAAGGCTTGGGCGC TERM 2751 3562113 - 3562087 - g 71 -2.3 -4.63527 | gap 2 CGACCAGCTCAAAAA GCTGGGAGTCG TGGACAT CGAC-CCC-GC TGGCGGCGAAGAGGC Daci_3255 3558836 - 3563503 + | prophage tail length tape measure TERM 2752 3563713 - 3563663 - g 100 -21.1 -3.75015 | ACAAGGTCTATGAAA GCGCGGCAGACAGCAACACCGGG AACAA CCCGGTCACGCCGTCCGCCACGC CGAAATGGAAGGAGG TERM 2753 3563932 - 3563964 + G 71 -2.5 -4.56597 | ACAACGGCGATGTCT CCAGTCCCGGTTGCT GTT GGCTGGTGGGAGTGG TTTTTCGGGGAGCGA Daci_3256 3563500 - 3564417 + | carbohydrate-binding family V/XII protein TERM 2754 3564608 - 3564575 - g 72 -5.1 -4.5287 | overlap 3564566 3564576 CCAAACCAACCAAAA CGCGGTCGCTGCC GACGAGCG GGCAGTGGCCGCC GATGCGTCCAAAAGC Daci_3257 3564414 - 3565430 + | hypothetical protein Daci_3258 3565979 - 3566212 + | hypothetical protein Daci_3259 3566216 - 3566590 + | hypothetical protein TERM 2755 3566613 - 3566626 + F 100 -9.5 -5.14563 | ACCACTCCACCCCAA CCCGC TCAG GCGGG TTTTTTCATGCCCGA Daci_3260 3566654 - 3567061 + | hypothetical protein Daci_3261 3567058 - 3567582 + | hypothetical protein Daci_3262 3567579 - 3568088 + | hypothetical protein TERM 2756 3568141 - 3568110 - T 100 -19.5 -5.2166 | gap 1, opp_overlap 3568110 TAAGAACGCAAAAAA GCCCCTCGGC-GCC TTGAT GGCTGCCGAGGGGC TTTTTTGCGTTCGAG TERM 2757 3568110 - 3568141 + T 100 -19.5 -5.15969 | gap 1, opp_overlap 3568110 TAAGAACGCAAAAAA GCCCCTCGGC-GCC TTGAT GGCTGCCGAGGGGC TTTTTTGCGTTCGAG TERM 2758 3568262 - 3568235 - T 100 -13.6 -4.61873 | CTGCAGAAACCAAAA GAGGAAATTGAG TTCC CCCAATTTCCTC CCACAATCCTCGCGG TERM 2759 3568284 - 3568296 + T 70 -4.1 -4.72272 | opp_overlap 3568269, overlap 3568269 TCCTCGCGGAACCCG CATGG ATG CTATG TTTTTGGTGCCGGAG Daci_3263 3569410 - 3568403 - | fructose-1,6-bisphosphatase TERM 2760 3569461 - 3569429 - R 76 -5.4 -4.62471 | gap 1, opp_overlap 3569436, overlap 3569430 3569431 TTCAACTCCTAAAAA TCCGGGAGGCGCGGC CTGG GCCGCGCCTTG-GGT CAATCCGCGAGGGCG TERM 2761 3569436 - 3569455 + r 83 -16.4 -3.07816 | opp_overlap 3569430 3569431 3569429 CCTAAAAATCCGGGA GGCGCGGC CTGG GCCGCGCC TTGGGTCAATCCGCG Daci_3264 3572187 - 3569461 - | aminopeptidase N TERM 2762 3572215 - 3572273 + r 76 -12.3 -3.33696 | gap 1, opp_overlap 3572223 3572265 3572268, overlap 3572215 3572271 CTATGCCAATATCAG GG-GACAGAGTCCAAGCCCCTGTGCGGC CGGT GCCGCCCAGGGGCTTGAAATCAGAGGCC TTGCTTGAGCGAGGC TERM 2763 3572264 - 3572223 - R 95 -20.9 -2.9039 | opp_overlap 3572215 3572215 ATATCAGGGGACAGA GTCCAAGCCCCTGTGCGGC CGGT GCCGCCCAGGGGCTTGAAA TCAGAGGCCTTGCTT Daci_3265 3573425 - 3572265 - | peptide chain release factor 2 TERM 2764 3573339 - 3573291 - G 71 -11.7 -3.65902 | opp_overlap 3573295, overlap 3573293 3573295 TGCATCGTAGTCAAA GATACCTCCGTAGATCTGCCGCA CGC TGCGACAGATCTTCGAGGGTGTT GCCGATGAGGTTGAT TERM 2765 3573337 - 3573293 - G 76 -14.3 -3.41073 | opp_overlap 3573295, overlap 3573291 3573295 CATCGTAGTCAAAGA TACCTCCGTAGATCTGCCGCA CGC TGCGACAGATCTTCGAGGGTG TTGCCGATGAGGTTG TERM 2766 3573335 - 3573295 - G 82 -16.9 -3.27408 | opp_overlap 3573295, overlap 3573293 3573291 TCGTAGTCAAAGATA CCTCCGTAGATCTGCCGCA CGC TGCGACAGATCTTCGAGGG TGTTGCCGATGAGGT TERM 2767 3573295 - 3573335 + g 74 -14.7 -3.04263 | opp_overlap 3573295 3573293 3573291 TCGTAGTCAAAGATA CCTCCGTAGATCTGCCGCA CGC TGCGACAGATCTTCGAGGG TGTTGCCGATGAGGT TERM 2768 3573640 - 3573613 - R 100 -18.4 -5.00884 | ACCTCCCGGAAAAAA GGCCCGGCCAGC AGAA GCTGGTCGGGCC TTGGCAGGCATGTCC Daci_3266 3575637 - 3573685 - | methyl-accepting chemotaxis sensory transducer TERM 2769 3574545 - 3574588 + g 75 -6.4 -4.41494 | overlap 3574546 GCACAGCGACCTGGG AGGCGGCGGCGGCCAGCTGG TTGG CCTGCTGGGCGTTGGCACCG TTTTGCTTGACGGTG Daci_3267 3578635 - 3575792 - | diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) Daci_3268 3578685 - 3579176 + | ECF subfamily RNA polymerase sigma-24 factor TERM 2770 3579737 - 3579757 + G 75 -10.3 -3.96327 | opp_overlap 3579725 ACAGGGCAGGGCAGG GTGCGCGCC CTG GGCACGCGC TTTGTCGTGCGCAGT Daci_3269 3579173 - 3580183 + | anti-FecI sigma factor, FecR TERM 2771 3580749 - 3580739 - g 70 -8.2 -3.85698 | opp_overlap 3580740, overlap 3580740 CGGCCCCGGCAGAAA GCCC CTG GGGC AGCACCAGCGGGTAT TERM 2772 3581018 - 3581028 + G 71 -2.4 -4.59773 | GCCTCATGCCGCTGG GCAC GCT GGGC TTTTTCGGCATGGAG TERM 2773 3581322 - 3581376 + G 70 -12.9 -3.28712 | gap 2 TGACCGCGTCTACCT GGCGCCCAGCCTGAC-CTGG-GCGC CGGACGC GCGCACCAGCGTCACGCTGCGCGGC TTCTACCAGAAGAAC Daci_3270 3580279 - 3582774 + | TonB-dependent siderophore receptor TERM 2774 3583262 - 3583274 + G 87 -9.1 -4.8048 | overlap 3583247 CGCGCTGCCGCCCAT CGTGC GGC GCACG TTTTTGCTGTCCCAG Daci_3271 3582894 - 3583400 + | ECF subfamily RNA polymerase sigma-24 factor Daci_3272 3583400 - 3584383 + | anti-FecI sigma factor, FecR Daci_3273 3584473 - 3586953 + | TonB-dependent siderophore receptor Daci_3274 3587059 - 3587562 + | ECF subfamily RNA polymerase sigma-24 factor Daci_3275 3587568 - 3588551 + | anti-FecI sigma factor, FecR Daci_3276 3588693 - 3591215 + | TonB-dependent siderophore receptor Daci_3277 3591599 - 3591342 - | hypothetical protein Daci_3278 3591974 - 3591603 - | hypothetical protein TERM 2775 3592573 - 3592596 + H 91 -4.5 -5.50499 | gap 1, overlap 3592570 GCCGGCAACCACCCA GGCC-GCTGT CCATT GCGGCTGGCC TTTTTTTCAATCTCG Daci_3279 3592689 - 3593024 + | hypothetical protein TERM 2776 3593501 - 3593450 - g 74 -11.4 -3.73224 | gap 1, opp_overlap 3593450 3593499 CCACGGGCGAGGAAA TGGGGGCCGGCCACGGCCACG-GCG CCG CGCGCGCCACCATGGGCGGCAACCA TTTCGTGGATTTCCA TERM 2777 3594191 - 3594223 + G 82 -13.3 -3.72742 | ACTTCCTGTGCGGCC TGGCGGGCGCGGCCA TGA TGGCCACGGGCGCCA TTCTCTTCATGGTCA Daci_3280 3593026 - 3594741 + | PepSY-associated TM helix domain-containing protein Daci_3281 3594738 - 3595115 + | hypothetical protein Daci_3282 3595165 - 3596397 + | RND family efflux transporter MFP subunit Daci_3283 3596391 - 3598391 + | ABC transporter related TERM 2778 3599115 - 3599059 - g 72 -13.6 -3.14344 | GAGCTGGCGCAGCAA CGCGGCCTGGTGGC-CAGCCAGCGCCAG GCC CTGGC-CACGCTGCGCCGCCAGGGCGAG GATGCCGATGCCACG Daci_3284 3598393 - 3599847 + | RND efflux system outer membrane lipoprotein TERM 2779 3599844 - 3599822 - T 100 -14.8 -5.28176 | GGCAGGCACAAAAAA GCCAGGAGGC ATT GCCACCTGGC TGAGAGGGAAGGGCC TERM 2780 3599901 - 3599855 - T 89 -18 -3.12351 | gap 2 CTGGCTGAGAGGGAA GGGCCAG-GGCCGC-CACCCGG TCCTG CCGGGTGTGCGGCCTCAGGCCT CAGGCTTGAAGCCTG Daci_3285 3601192 - 3599918 - | acyl-CoA dehydrogenase domain-containing protein Daci_3286 3602360 - 3601275 - | aminoglycoside phosphotransferase TERM 2781 3602502 - 3602488 - R 71 -7 -4.18197 | overlap 3602489 ATGTGGCAGGGAAAA GGCCGC GGC GCGGGC CGCGCAGGTTCAGGC Daci_3287 3603231 - 3602512 - | Crp/FNR family transcriptional regulator TERM 2782 3603388 - 3603363 - R 100 -13.3 -5.40072 | opp_overlap 3603361 3603360 3603363 GGGCGGCGAAAAAAA GGCGACCCG TCTTGCAT CGGGTCGCC GGCTTTGCAGGGCTT Daci_3288 3604895 - 3603402 - | 3-hydroxybutyryl-CoA dehydrogenase TERM 2783 3606414 - 3606392 - g 71 -11.2 -3.66356 | overlap 3606396 ATGCCGAACTGGAAA CCGAGCCTGC GCC GCAGGCCCCG GCACCTGTGCGCACG TERM 2784 3606849 - 3606819 - g 70 -14.6 -2.71364 | opp_overlap 3606818 3606817 CTACCTGTTCAAGCA GGACGGCGCACCCG ACC CCGATGCGCCGGCC CCTTTCGACCTGGCC Daci_3289 3604948 - 3607701 + | hypothetical protein TERM 2785 3607736 - 3607721 - T 100 -10.4 -5.08824 | opp_overlap 3607721 TGTGCATCGAAAAAA GGGAGC ATCT GCTCCC TTTTTTTTGGGCGTG TERM 2786 3607721 - 3607736 + T 100 -10.4 -5.76949 | opp_overlap 3607721 TGTGCATCGAAAAAA GGGAGC ATCT GCTCCC TTTTTTTTGGGCGTG Daci_3290 3608687 - 3607764 - | thiamine-phosphate pyrophosphorylase TERM 2787 3608750 - 3608717 - R 76 -12.3 -3.28712 | opp_overlap 3608716 GCCGTGGTGCCAGAA CGGCGTGCCCAGCAC GGGC GTGCTGGGCTGGGCG GCCGATTGCTCGGCC Daci_3291 3609541 - 3608699 - | thiazole synthase Daci_3292 3609738 - 3609541 - | thiamine biosynthesis protein ThiS Daci_3293 3611054 - 3609858 - | FAD dependent oxidoreductase TERM 2788 3611073 - 3611057 - H 71 -5.7 -4.37092 | opp_overlap 3611058 3611059 ATGTGCTGGACAAAA CGCGGCG TAC CACCCCG ATTGATTGAAACTCC Daci_3294 3611331 - 3612212 + | phosphomethylpyrimidine kinase Daci_3295 3612710 - 3612234 - | hypothetical protein Daci_3296 3612912 - 3613676 + | ankyrin Daci_3297 3613791 - 3615992 + | TonB-dependent siderophore receptor TERM 2789 3616054 - 3616072 + T 100 -11.7 -5.26119 | opp_overlap 3616045 TAACAATGCGTGCAA GCTGCCC CCAGA GGGCAGC TTTTGTTTTTGACAG TERM 2790 3616126 - 3616106 - T 100 -8.2 -5.60993 | overlap 3616108 CGTTGGACAAAAAAA GAGCCCGC ACAAG GCGGGCTG GTGATGGTCAGGCCG TERM 2791 3616124 - 3616108 - T 89 -10.8 -4.45201 | overlap 3616106 TTGGACAAAAAAAGA GCCCGC ACAAG GCGGGC TGGTGATGGTCAGGC Daci_3298 3616956 - 3616171 - | PpiC-type peptidyl-prolyl cis-trans isomerase TERM 2792 3617030 - 3617007 - R 87 -16.8 -3.1247 | AGCGCGGATACGCAA CAGGCTCCGA ATCG TCGGAGCCTG TAAAAGTTCAAAGAA Daci_3299 3617319 - 3617038 - | BolA family protein Daci_3300 3617915 - 3617316 - | intracellular septation protein A TERM 2793 3617361 - 3617385 + g 88 -14.9 -3.71998 | CGGGGGCAGGGCGTC GGGCGTGGCGG CTG CTGCCTCGCCC TTGTCTTCCTGCATG TERM 2794 3617976 - 3618023 + r 100 -13.2 -4.67353 | overlap 3617977 GGCAGGCGCATTGTG GCGCAGCCGGCGCGGCCCGGCA TCGG TGCAGGGCCGCGTGGCCTGGGG TTTTTGCGTGCCTGG TERM 2795 3617977 - 3618022 + r 93 -16.7 -3.3993 | overlap 3617976 GCAGGCGCATTGTGG CGCAGCCGGCGCGGCCCGGCA TCGG TGCAGGGCCGCGTGGCCTGGG GTTTTTGCGTGCCTG Daci_3301 3618455 - 3618042 - | methionine-R-sulfoxide reductase Daci_3302 3619984 - 3618452 - | hypothetical protein TERM 2796 3618673 - 3618660 - G 71 -9.5 -3.72893 | overlap 3618636 3618661 GATTCTTGCATCAAA GCGGC GGCC GCCGC GGCATCCGTGCCTGC TERM 2797 3619256 - 3619217 - G 73 -7 -4.14243 | gap 1 CACGCCATGGCAAAA GCCCACGGC-CTGCCAGTG CGC CAGCAGCCGCGCCGTGCGC TCGCTCACGGCCTGC Daci_3303 3621070 - 3620054 - | AraC family transcriptional regulator TERM 2798 3620170 - 3620214 + g 74 -11.3 -3.73072 | gap 1, opp_overlap 3620141, overlap 3620171 3620192 CCACCTCGGCCAGGC TGCGGCGCG-GCTCGCCCAG GTACTG CAGGGCCAGCTCGCGCCGGG TTTCGTCCAGCAGTT Daci_3304 3621261 - 3622973 + | carboxylesterase type B Daci_3305 3623052 - 3624887 + | X-Pro dipeptidyl-peptidase domain-containing protein TERM 2799 3626639 - 3626581 - g 83 -8.9 -4.62069 | gap 3, opp_overlap 3626588, overlap 3626582 GCGCCACCGGAAAAA TGCTCAA-GACCCGGCTGCGCGAGCAGC TGGCCG GCTAC-CG-GCTGCCGGGGCTTTGAGCC GCTGCGGGCGGCCAC TERM 2800 3626638 - 3626582 - g 70 -12.4 -3.3692 | gap 3, opp_overlap 3626588, overlap 3626581 CGCCACCGGAAAAAT GCTCAA-GACCCGGCTGCGCGAGCAGC TGGCCG GCTAC-CG-GCTGCCGGGGCTTTGAGC CGCTGCGGGCGGCCA Daci_3306 3624999 - 3626636 + | acyl-CoA synthetase Daci_3307 3626806 - 3628041 + | extracellular ligand-binding receptor TERM 2801 3628087 - 3628071 - f 90 -15.1 -3.5774 | opp_overlap 3628071 3628086 AGTGAACTTCGCAAA GGGGCGC GAG GCGCCCC TTTTTTTGCCTGAAA TERM 2802 3628071 - 3628087 + F 100 -15.1 -5.47218 | opp_overlap 3628071, overlap 3628086 AGTGAACTTCGCAAA GGGGCGC GAG GCGCCCC TTTTTTTGCCTGAAA TERM 2803 3628086 - 3628117 + F 87 -10.2 -4.40804 | opp_overlap 3628071 3628103, overlap 3628071 GGGGCGCGAGGCGCC CCTTTTTTTGCCTG AAAT CAGGCAAAACACGG TTTTCTGGCCTGATC TERM 2804 3628478 - 3628468 - g 79 -2.4 -4.87626 | GTTCAACAGGAAAAA TGCC TCG GGCG TGAAGTTCGAGATCA TERM 2805 3628553 - 3628527 - g 74 -15.8 -2.78816 | overlap 3628510 TCAGCCCGCAGGAGA CCACGGCCGTGC TGC GCTCGGCCATGG ACCAGGGCGCACGCT Daci_3308 3628283 - 3629518 + | extracellular ligand-binding receptor Daci_3309 3629571 - 3630524 + | inner-membrane translocator Daci_3310 3630529 - 3631893 + | inner-membrane translocator Daci_3311 3631897 - 3632724 + | ABC transporter related TERM 2806 3632791 - 3632775 - g 73 -8 -4.15565 | opp_overlap 3632774 CCTATTACGGCAAAA GCCATG TGCTG CATGGC GTGGATTTCTCGGTG TERM 2807 3633295 - 3633262 - g 82 -11.8 -4.12188 | gap 1 CGAGTACCTGCAAAA GATCAAGCAGCGCGG CGTGT CCGTGCTGC-TGATC GAGCAAAAGCTCACC Daci_3312 3632735 - 3633430 + | ABC transporter related TERM 2808 3633463 - 3633520 + F 100 -17 -4.06089 | gap 2, opp_overlap 3633441, overlap 3633463 CATGCTGCCAGGCAG GCGGCCCGG-ACCACGGCGCTT-GTCCC GCTT GGGACAAACCGCAGTGGCGCCGGTCCGC ATTTTTTTTACAATC TERM 2809 3633463 - 3633521 + F 100 -11 -5.78622 | gap 3, opp_overlap 3633441, overlap 3633463 CATGCTGCCAGGCAG -GCGGCCCGG-ACCACGGCGCTT-GTCCC GCTT GGGACAAACCGCAGTGGCGCCGGTCCGCA TTTTTTTTACAATCA Daci_3313 3633581 - 3635692 + | 3-hydroxyacyl-CoA dehydrogenase NAD-binding TERM 2810 3636297 - 3636279 - g 81 -10.2 -4.2828 | CGCCAGCCAGCAAAA GGCCTGCG CGG CCCAGGCC GCCGGCCTGCTGGAT TERM 2811 3636885 - 3636910 + G 78 -16.1 -3.0497 | CGTGACCATGTGCAT CGGCGGCGGCA TGGG TGCCGCCGGCG TGTTCGAAGTGCTGT Daci_3314 3635752 - 3636927 + | acetyl-CoA acetyltransferase TERM 2812 3636930 - 3636957 + F 72 -12.6 -3.10464 | overlap 3636922 3636933 CGAAGTGCTGTAAGT GCAGGTGGCGGC TGTG GCCGCCACCGCC TGTTCCCGTTACTCC TERM 2813 3636975 - 3637013 + G 100 -8.6 -5.26875 | overlap 3636978 TTCCCGTTACTCCTG TTGGCCGCACGCGCTCCC TCT GGCGGCGCCTGCGGCTTC TTTTTTGATTCCGGA TERM 2814 3636978 - 3637010 + G 100 -16.9 -4.72473 | overlap 3636975 CCGTTACTCCTGTTG GCCGCACGCGCTCCC TCT GGCGGCGCCTGCGGC TTCTTTTTTGATTCC Daci_3315 3636943 - 3638880 + | acyl-CoA dehydrogenase domain-containing protein TERM 2815 3638939 - 3638918 - T 85 -5.7 -5.1101 | opp_overlap 3638918 GGAGGATGCAAAAAA GCGCCGACC ATGT GGTCTGTGC TTTTTTTATTTCAGG TERM 2816 3638918 - 3638939 + T 100 -7.9 -5.95539 | opp_overlap 3638918 GGAGGATGCAAAAAA GCGCCGACC ATGT GGTCTGTGC TTTTTTTATTTCAGG Daci_3316 3639345 - 3638950 - | hypothetical protein Daci_3317 3640395 - 3639568 - | hypothetical protein TERM 2817 3639749 - 3639735 - G 71 -2.8 -4.62069 | CTCCTAGCGGAAAAA TGACCA AAG TGGTAA CGCTTGCAGTTAGGG Daci_3318 3641423 - 3640950 - | GCN5-related N-acetyltransferase TERM 2818 3641211 - 3641237 + g 73 -12.3 -3.53012 | gap 1 ATCCACCTGGCGCAG GGCGGCGCAGCC CACG GGCTG-GCCGTC TTTCCAGGCCAGCAG Daci_3319 3641839 - 3641582 - | hypothetical protein TERM 2819 3641628 - 3641659 + g 72 -4.5 -4.40003 | gap 1, overlap 3641631 TCGCACCTGCCGGTT TGCCTGGAGATCTG TGCTC CAGCTTTC-AGGCA TTTGTCTTTCTCCAC Daci_3320 3642528 - 3641830 - | hypothetical protein Daci_3321 3642666 - 3643709 + | hypothetical protein Daci_3322 3645871 - 3643796 - | oxidoreductase FAD/NAD(P)-binding subunit Daci_3323 3646601 - 3645918 - | glutathione S-transferase domain-containing protein TERM 2820 3646688 - 3646652 - H 95 -13 -4.20918 | gap 1 GGGAACGCGAACAAA GC-GCCGGCGCAAACCT GTGC AGGCCTGCGCGGGCCGC TCGCAGCCGGGCAGA Daci_3324 3646731 - 3647630 + | LysR family transcriptional regulator Daci_3325 3647892 - 3647647 - | hypothetical protein TERM 2821 3647993 - 3647973 - H 88 -6.9 -4.93877 | opp_overlap 3647973 3647976, overlap 3647976 CTGGATCAAACAAAA CTAGAATGA TAG TCATTCTCG TTGTCGATTCCTCAC TERM 2822 3648056 - 3648067 + G 78 -5.8 -4.55287 | CCTGGACCGCTGCGC GCTG GCAC CAGC TTTTCTGTGCCTGCC TERM 2823 3648891 - 3648915 + G 78 -13.5 -3.60296 | GGAGGCTGGCCCCCT GCGCGTGACCG TGC TGGGCACGCGC TTTGGCGTGGAACTG TERM 2824 3649325 - 3649358 + G 95 -6.5 -5.4477 | overlap 3649326 3649351 ACGGCGGCCTGCGGA TTGCGCGGCGCGGCG GGCG CGCGGAGCCGTGAAG TTTTTTTCAGGGTTT Daci_3326 3648022 - 3649356 + | anti-FecI sigma factor, FecR TERM 2825 3649509 - 3649519 + G 87 -8.2 -4.76041 | CCGCCTCCGTCTCCG CCGC ACA GCGG TTTTTCATGCATGTG TERM 2826 3649681 - 3649737 + G 91 -20.7 -3.33696 | overlap 3649682 TCCGAACTGGTGCAG GGCCGGCAGGCCCCGGCGCTCAACG GCAGCCA CGATGTGCGCCAGGGCCTGGCGGCA TTGCTTCAGGGCAGC TERM 2827 3649682 - 3649736 + G 95 -24.2 -2.60075 | overlap 3649681 CCGAACTGGTGCAGG GCCGGCAGGCCCCGGCGCTCAACG GCAGCCA CGATGTGCGCCAGGGCCTGGCGGC ATTGCTTCAGGGCAG TERM 2828 3650470 - 3650441 - g 78 -12.2 -3.79747 | gap 1, opp_overlap 3650467 CCATGGACCATCAAA GCACCGACGGCCA TGTGC TGGCCGT-GGCGC TGGACTACGAGGTGG TERM 2829 3651397 - 3651382 - g 76 -2.4 -4.68593 | overlap 3651383 TTCAGCATTGAAAAA CCCAGC GGCG GCCTGG ACCAGGGCGTCTACA Daci_3327 3649462 - 3651876 + | TonB-dependent siderophore receptor Daci_3328 3653442 - 3651901 - | major facilitator transporter TERM 2830 3652096 - 3652122 + g 74 -10.9 -3.74872 | gap 1, overlap 3652099 ATCGGCCTGTGCTGC CAGGGGGCTGGC CGCA GCCAGCTCC-TG TTTCATCAAATGGGT TERM 2831 3652099 - 3652120 + g 76 -13.7 -3.4582 | overlap 3652096 GGCCTGTGCTGCCAG GGGGCTGGC CGCA GCCAGCTCC TGTTTCATCAAATGG Daci_3329 3653542 - 3654513 + | LysR family transcriptional regulator Daci_3330 3654488 - 3655072 + | flavodoxin/nitric oxide synthase Daci_3331 3656363 - 3655131 - | TPR repeat-containing protein Daci_3332 3656941 - 3656480 - | hypothetical protein Daci_3333 3657577 - 3656945 - | N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD Daci_3334 3658712 - 3657765 - | hypothetical protein TERM 2832 3659148 - 3659192 + G 75 -4.9 -4.57073 | gap 1, opp_overlap 3659144 3659141, overlap 3659149 GCTGAAGATCAGCGC GCCGGCCGTGCTGGGCGACA TCTGGC TGTCGC-CACTGCTGCCGGG TTTTTGCGCGCGCTG Daci_3335 3658843 - 3659781 + | LysR family transcriptional regulator Daci_3336 3661343 - 3659778 - | phosphonate ABC transporter, inner membrane subunit Daci_3337 3662158 - 3661334 - | ABC transporter related Daci_3338 3663062 - 3662178 - | phosphonate ABC transporter, periplasmic phosphonate-binding protein TERM 2833 3663087 - 3663108 + r 71 -8.7 -3.72576 | CCGTTCAATCAGCCA CCGCCGT CCGGATAC ACGGCGG TTTAATGGGCGCCCG Daci_3339 3664393 - 3663227 - | mandelate racemase/muconate lactonizing protein TERM 2834 3664059 - 3664093 + g 83 -4.9 -4.90869 | gap 1, overlap 3664054 3664053 GCCATGTCGATGGTG CCC-ACGGCCACCG ATCGCTCG CCGTGGCCGCCGGG TTTTTCATTGATCAT Daci_3340 3665137 - 3664430 - | short-chain dehydrogenase/reductase SDR Daci_3341 3666104 - 3665127 - | hypothetical protein Daci_3342 3667165 - 3666227 - | dihydrodipicolinate synthetase Daci_3343 3667316 - 3668311 + | LysR family transcriptional regulator TERM 2835 3668375 - 3668404 + F 82 -14.9 -3.1372 | overlap 3668374 TTTCCTTCCGCTTTG CGCACCACCTGGG CCTG CCCTGGCGGTGCG TCTTGCTGCGCGCTG TERM 2836 3668462 - 3668480 + F 74 -7.4 -4.323 | opp_overlap 3668462, overlap 3668464 GACCAATAAACATCA TGGTGCAG TAT CTGCACTG TTTTAGGTGTTTACC TERM 2837 3668464 - 3668478 + F 76 -10 -3.75707 | opp_overlap 3668462, overlap 3668462 CCAATAAACATCATG GTGCAG TAT CTGCAC TGTTTTAGGTGTTTA TERM 2838 3669100 - 3669115 + G 70 -3.2 -4.4078 | opp_overlap 3669091 AGACCAGCGGCTGCA GCTCAT CCTG GTGGGC TTTTGCTTCGGCGCC Daci_3344 3668747 - 3670429 + | L-lactate permease Daci_3345 3670615 - 3671421 + | DNA-binding transcriptional repressor LldR Daci_3346 3671432 - 3672571 + | L-lactate dehydrogenase TERM 2839 3673078 - 3673047 - g 71 -10.8 -3.63515 | gap 1, opp_overlap 3673059, overlap 3673048 CGGCATCTGCAACAA CTCGGGCGGCGCC CTGGTGC GGCGCGGCCCG-G CTTACACCGAGCTGG Daci_3347 3672568 - 3674322 + | D-lactate dehydrogenase Daci_3348 3674487 - 3674365 - | putative transcriptional regulator Daci_3349 3676187 - 3674514 - | peptidase S41 TERM 2840 3675311 - 3675357 + g 75 -15.9 -2.86271 | overlap 3675305 CTCCCGGTCGCACTT C-CTTGATGCCCTGGCGCGGTGC CCG GGGCCGCGCCAGGGCA-CGGGCG TCCTTGTCGTCCAGC TERM 2841 3676229 - 3676184 - G 79 -15.5 -3.28712 | gap 1, overlap 3676187 3676209 3676211 CGTGCTTTCCGACAA GCACCCGCTGCCGGCCTGCA CAAAAGC TGCAGGCCGGCAGCAGCC-C TCACAGATTGATGAA TERM 2842 3676227 - 3676187 - G 84 -20.5 -2.82623 | overlap 3676184 3676209 3676211 GCTTTCCGACAAGCA CCCGCTGCCGGCCTGCA CAAAAGC TGCAGGCCGGCAGCAGC CCTCACAGATTGATG TERM 2843 3676224 - 3676209 - R 71 -6.1 -4.36914 | overlap 3676187 3676184 3676211 CCGGCCTGCACAAAA GCTGC AGGCCG GCAGC AGCCCTCACAGATTG Daci_3350 3677738 - 3676230 - | aldehyde dehydrogenase TERM 2844 3677799 - 3677789 - R 74 -6.8 -4.42386 | opp_overlap 3677789, overlap 3677790 TGTGGATTCAGAAAA CCTG CAG CAGG CGCAGGTTGATGCGG Daci_3351 3678662 - 3677781 - | hypothetical protein TERM 2845 3678738 - 3678696 - R 93 -16.2 -3.64703 | overlap 3678697 GTGTTTTCAGGCAAA GCCCTGCCCAGGCCTGCTGC AGG ACAGCAGGGCCGGGGAGGGG ATTGGGAGGTTGGGG TERM 2846 3678737 - 3678697 - R 88 -19.7 -2.78679 | overlap 3678696 TGTTTTCAGGCAAAG CCCTGCCCAGGCCTGCTGC AGG ACAGCAGGGCCGGGGAGGG GATTGGGAGGTTGGG Daci_3352 3680902 - 3678779 - | methanol/ethanol family PQQ-dependent dehydrogenase TERM 2847 3680997 - 3680983 - R 100 -7.8 -5.69473 | GAGACGATAAAAAAA GCGACC TCG GGTCAC AACATTCGGATTTAC Daci_3353 3683255 - 3681045 - | TonB-dependent receptor plug TERM 2848 3682293 - 3682351 + g 93 -14 -4.14472 | overlap 3682302 GGCCATGAGTTCCAG GCGCTG-GCCCGCGCCGAACT-GGTGCTGC CAG GCGGCACCCAGCT-GGCGCTGGCGCA-CGC TTTTGCGCGTATTGA Daci_3354 3683369 - 3684547 + | Fis family transcriptional regulator Daci_3355 3685475 - 3684558 - | LysR family transcriptional regulator Daci_3356 3685581 - 3686906 + | phosphopyruvate hydratase Daci_3357 3687820 - 3686861 - | hypothetical protein Daci_3358 3688305 - 3687997 - | hypothetical protein TERM 2849 3688085 - 3688031 - G 78 -10.5 -4.16842 | opp_overlap 3688029 3688068 3688070 CGCACCTCGAAGAAA CTGCATTCGCCGTCGCCCAGGCC CTGCATGCC GGCCTCGGTGGCGGCGCGCGCAG CCTTCATCCAGCGGG TERM 2850 3689086 - 3689101 + G 78 -6 -4.56597 | overlap 3689087 GCGTGCTGGCTGCCG GCGCCC AGCC GGGCGG TTTTTCGGGCGGCGG Daci_3359 3688476 - 3689195 + | methylated-DNA--protein-cysteine methyltransferase Daci_3360 3689333 - 3690124 + | gluconate 5-dehydrogenase Daci_3361 3690219 - 3690665 + | thioesterase superfamily protein Daci_3362 3690764 - 3691783 + | alcohol dehydrogenase Daci_3363 3691975 - 3692880 + | hypothetical protein Daci_3364 3693606 - 3692884 - | hypothetical protein TERM 2851 3694422 - 3694404 - g 81 -13.1 -3.90112 | TGGGCCTGAAGGAAA CGCGCGG GGCCG CCGCGCG GCTGGACAGCAGCGT Daci_3365 3693752 - 3695062 + | Bcr/CflA subfamily drug resistance transporter Daci_3366 3695059 - 3696483 + | major facilitator transporter TERM 2852 3696632 - 3696601 - g 81 -7.2 -4.63048 | overlap 3696603 3696604 TTTACAAACAAGAAA TATGGGCACTGCAC AATC GTGCGATGCCCCCA ACGACTTCGCTGCTC TERM 2853 3696769 - 3696731 - g 70 -12.2 -3.36327 | opp_overlap 3696744 GCAGGGCACGTACAA GTTTCCGCCTCGCCGGCC GGT GGCCGGCGCATCGGCACC GCCGTGCTGTGCGCA Daci_3367 3696575 - 3698017 + | RND family efflux transporter MFP subunit Daci_3368 3698036 - 3701233 + | hydrophobe/amphiphile efflux-1 (HAE1) family protein TERM 2854 3702516 - 3702495 - g 78 -10.1 -4.18018 | CGCCGCCACGCAAAA GGCCTTCGA CCTG TCGGAGGCC CGCTTCAAGGCCGGC Daci_3369 3701230 - 3702699 + | RND efflux system outer membrane lipoprotein Daci_3370 3702750 - 3703079 + | hypothetical protein Daci_3371 3704188 - 3703064 - | hypothetical protein TERM 2855 3703821 - 3703782 - G 78 -12 -3.68244 | overlap 3703783 ACCACGAAGCGGAAA TCGGCCGGCACCTGGCCC GCGA AGGCCAGGTACTGGCTGG CCGTCAACGGCCTCC TERM 2856 3703820 - 3703783 - G 70 -15.5 -2.80464 | overlap 3703782 CCACGAAGCGGAAAT CGGCCGGCACCTGGCCC GCGA AGGCCAGGTACTGGCTG GCCGTCAACGGCCTC TERM 2857 3704591 - 3704638 + G 75 -9.6 -4.07885 | CCCGAAGGCGTGGAT GCTGCCGAGGTCTGTGCGCCCG ATGC CACGCGCATCGGCCACCGCAGC TTTTCCCAGCCCGTG Daci_3372 3704474 - 3705601 + | regulator of chromosome condensation RCC1 Daci_3373 3705625 - 3707361 + | multicopper oxidase type 2 TERM 2858 3709030 - 3709009 - g 73 -10.1 -3.92178 | overlap 3709010 ACGACGTGAACCAAA GCGAGCTGG CGCG CCAGCTCGA CGCCGTGGTCGAGGA TERM 2859 3709475 - 3709451 - g 95 -14.9 -4.11216 | opp_overlap 3709451, overlap 3709432 GGGCGAGCTGGAAAA GCCCGGCCGCG ACC CGCGCCCGGAC TTCGTCGTCGCCCGC Daci_3374 3707541 - 3709901 + | RNA-binding S1 domain-containing protein TERM 2860 3710090 - 3710119 + G 82 -17.1 -3.04144 | ATCCCGCGCTGGCTG CCGGGCTGCTGGC GCAG GCCAACGGCCCGG TCTTCGGCATGGCGG Daci_3375 3709930 - 3710769 + | putative signal transduction protein Daci_3376 3712022 - 3710790 - | Sel1 domain-containing protein Daci_3377 3713822 - 3712062 - | peptidoglycan binding domain-containing protein TERM 2861 3713566 - 3713553 - G 73 -8.1 -4.11692 | CAGCGAGTCGGAAAA GCTCG ATAT CGAGC GCACCGGCCGCACCA TERM 2862 3713907 - 3713930 + r 79 -15.2 -2.88544 | opp_overlap 3713904 3713903 GGATCGAGAAATGGT GGGCGGCCCG AAGG CTGGCCGCCC TGTGTCGCGCTAGCG Daci_3378 3714362 - 3713940 - | hypothetical protein TERM 2863 3714409 - 3714437 + r 100 -19.5 -3.95584 | TTCGCCGGGAAGGTG CCGCCGGGTGGCC TGG GGCCGCCCGGCAG TTTCCTTCGTCCGGC Daci_3379 3714946 - 3714461 - | hypothetical protein Daci_3380 3715604 - 3716383 + | two component LuxR family transcriptional regulator Daci_3381 3716459 - 3717376 + | putative signal transduction histidine kinase Daci_3382 3717522 - 3720161 + | putative phytochrome sensor protein Daci_3383 3721305 - 3720169 - | iron-containing alcohol dehydrogenase TERM 2864 3721413 - 3721403 - H 71 -6.8 -4.27211 | overlap 3721398 TGCAAACAAAGCAAA CCCT GAG AGGG CGCTGCGACGGTCAC Daci_3384 3721597 - 3722601 + | alpha/beta hydrolase domain-containing protein Daci_3385 3722672 - 3723535 + | GCN5-related N-acetyltransferase TERM 2865 3723563 - 3723521 - T 91 -13.5 -3.80841 | gap 1, overlap 3723522 ATCACCATGAGGAAA GTGCT-CACCGCCTGAGCTG CAGG CAGCTCAGGCGGTGCAAGGC TCAAATCTCAAATGT TERM 2866 3723559 - 3723522 - T 81 -15.8 -2.88023 | gap 2, overlap 3723521 TCACCATGAGGAAAG TGCTCACCGCCTGAGCTG CAGG CAGCTCAGGCGGT--GCA AGGCTCAAATCTCAA Daci_3386 3724518 - 3723571 - | folate-binding protein YgfZ TERM 2867 3724873 - 3724859 - g 81 -7.1 -4.56597 | GTGCTGCTGCAAAAA CTCGC ACGCG GCGAG GAATCGCTCAAGGCG TERM 2868 3725002 - 3725032 + G 71 -11.1 -3.62597 | overlap 3725002 CCTCATGCAGGCCCT G-GGCCGCGCGGGCG TGG CGCCCGAG-GGCCGC TTCTTCCCCGATACC Daci_3387 3724589 - 3725578 + | aminodeoxychorismate lyase TERM 2869 3725594 - 3725572 - f 79 -9.1 -4.25848 | opp_overlap 3725566 3725565 3725593, overlap 3725560 AAGCCCTGAGCAAAA GCCCTGAGA TATTC CCCCAGGGC TGCTGCGTTCTGCGC Daci_3388 3725636 - 3726322 + | dTMP kinase Daci_3389 3726319 - 3727368 + | DNA-directed DNA polymerase TERM 2870 3727585 - 3727567 - g 79 -8 -4.45544 | opp_overlap 3727567 GGCGATCAAGGAAAA GGCCGCGC TGT ACGCCGCC TACATTCCCATGTTC Daci_3390 3727508 - 3727867 + | type IV pilus assembly PilZ TERM 2871 3727886 - 3727930 + F 86 -12.9 -3.85698 | gap 1, overlap 3727888 3727889 CTGCGCCTGCCTCTG CCCGCATGCCGACACGGAGG AAGTGC TCTCCG-GTCGGCATGCCTG TTTCTGAACCACGAG TERM 2872 3727888 - 3727928 + F 86 -14.1 -3.51934 | gap 1, overlap 3727886 3727889 GCGCCTGCCTCTGCC CGCATGCCGACACGGAGG AAGTGC TCTCCG-GTCGGCATGCC TGTTTCTGAACCACG TERM 2873 3727889 - 3727927 + F 84 -17.6 -2.70946 | gap 1, overlap 3727888 3727886 CGCCTGCCTCTGCCC GCATGCCGACACGGAGG AAGTGC TCTCCG-GTCGGCATGC CTGTTTCTGAACCAC Daci_3391 3727891 - 3728763 + | TatD family hydrolase Daci_3392 3728754 - 3729497 + | ankyrin Daci_3393 3731360 - 3729543 - | lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA TERM 2874 3729819 - 3729858 + g 70 -12.8 -3.32844 | gap 1, opp_overlap 3729850 CAGCGCCCGTGCAAT CGCCAGCC-GTTGGCGCTG GCC CCCCGACAACTGGCTGGCG TTGTGGCCTACCACC TERM 2875 3732056 - 3732045 - g 76 -2.2 -4.76041 | TACATCTACGAAAAA CTCA CGGG CGAG AAGGGCGTGTTCTCC Daci_3394 3731544 - 3732869 + | beta-propeller repeat-containing to-pal system protein TolB TERM 2876 3733435 - 3733420 - g 72 -4.6 -4.42238 | CTACGGCAAGGAAAA GCCTGC CGCC GAAGGC CATTCCGAAGACGCC Daci_3395 3732947 - 3733489 + | peptidoglycan-associated lipoprotein TERM 2877 3733798 - 3733752 - g 80 -16.4 -3.20723 | overlap 3733767 GTCCGAGCAAGCCAA GCTGCGCGGCCAGAACGAGCAG CTG CTGCGCGATGTGGCCGAGCTGC AGCGCGGCCAGCGCG Daci_3396 3733489 - 3734271 + | tol-pal system protein YbgF TERM 2878 3734341 - 3734307 - g 85 -15.8 -3.61398 | opp_overlap 3734314, overlap 3734312 3734314 TCCCTTCCGGAAGAA GACAAGACAGCGCCTG AAG CAGGCGCTGTTTTTTC TGATGCCGACCTGCA TERM 2879 3734336 - 3734312 - g 86 -14.3 -3.83318 | opp_overlap 3734314, overlap 3734307 3734314 TCCGGAAGAAGACAA GACAGCGCCTG AAG CAGGCGCTGTT TTTTCTGATGCCGAC TERM 2880 3734314 - 3734334 + G 100 -16.9 -5.31275 | opp_overlap 3734312 3734307 3734314 CGGAAGAAGACAAGA CAGCGCCTG AAG CAGGCGCTG TTTTTTCTGATGCCG TERM 2881 3734334 - 3734314 - g 84 -16.9 -3.49835 | opp_overlap 3734314, overlap 3734312 3734307 CGGAAGAAGACAAGA CAGCGCCTG AAG CAGGCGCTG TTTTTTCTGATGCCG Daci_3397 3734271 - 3735098 + | UBA/THIF-type NAD/FAD binding protein TERM 2882 3735280 - 3735303 + T 100 -14.6 -5.18355 | opp_overlap 3735280 AACTTAGAACAAAAA GCCCGCTGCT GAAA AGTAGCGGGC TTTTTCATTTTTAAG TERM 2883 3735303 - 3735280 - T 100 -12.4 -5.21236 | opp_overlap 3735280 AACTTAGAACAAAAA GCCCGCTGCT GAAA AGTAGCGGGC TTTTTCATTTTTAAG Daci_3398 3735797 - 3735342 - | hypothetical protein Daci_3399 3736404 - 3735880 - | hypothetical protein TERM 2884 3736173 - 3736195 + g 84 -4.9 -5.06414 | CGCCGACGCTGCAGA GAGTGATTT CGGTC AGGTCACTC TTTTTCTTCAACGCG Daci_3400 3736729 - 3736448 - | hypothetical protein Daci_3401 3737453 - 3736938 - | hypothetical protein TERM 2885 3737162 - 3737151 - G 71 -2.2 -4.58685 | AAAGCGCTGCAAAAA GCCA CCAG TGAC CAAGAAGGATTCCTC TERM 2886 3737357 - 3737342 - G 72 -9 -4.07687 | opp_overlap 3737350 AGCTCGGCCCGAAAA GACCTG CAGT CAGGTC ATACCCGCCGTCTTT Daci_3402 3737656 - 3737450 - | hypothetical protein Daci_3403 3737930 - 3737649 - | hypothetical protein Daci_3404 3738499 - 3737924 - | hypothetical protein TERM 2887 3738567 - 3738546 - R 73 -5.1 -4.72007 | opp_overlap 3738534 3738532 3738553, overlap 3738552 3738553 GTTTAGCAAAACAAA GCGAAACGC GAAA GTATTTCGC TAAGTTTTGCGATAT Daci_3405 3740000 - 3738567 - | helicase-like protein TERM 2888 3738805 - 3738785 - G 77 -3.2 -4.77165 | gap 1, overlap 3738786 TGGTCGAGAAGAAAA CGCACTGGC AGGT GCC-GTGCT GCAGGCCGTCGACGC TERM 2889 3739695 - 3739725 + g 91 -9 -4.91109 | ATTGATGGCGGTGAT GTGGCAGC-CGGCC TGGAT GGCCGCGC-GCCGC TTTTTCTCGTCGCCG Daci_3406 3740614 - 3740225 - | hypothetical protein Daci_3407 3740912 - 3740628 - | VRR-NUC domain-containing protein Daci_3408 3741783 - 3741217 - | endodeoxyribonuclease Daci_3409 3742001 - 3741780 - | hypothetical protein Daci_3410 3742948 - 3741998 - | hypothetical protein TERM 2890 3743029 - 3743008 - R 83 -4.3 -5.10077 | overlap 3743012 AAATATCGCAAAAAA GAAAGCCCC TTGC GGGGCTGTG GAGCATCAATCTTTT TERM 2891 3743025 - 3743012 - R 100 -9.5 -5.05153 | overlap 3743008 ATCGCAAAAAAGAAA GCCCC TTGC GGGGC TGTGGAGCATCAATC Daci_3411 3745149 - 3743035 - | DNA-directed DNA polymerase TERM 2892 3743810 - 3743824 + g 89 -4.2 -5.24796 | AGGTCGGGAACCTTG CCGAAA GCG TTGCGG TTTTTCTTCTCTACG Daci_3412 3745580 - 3745146 - | CMP/dCMP deaminase zinc-binding Daci_3413 3746578 - 3745643 - | recombination associated protein TERM 2893 3746145 - 3746183 + g 76 -13.9 -3.39803 | gap 2, overlap 3746173 3746176 CTGACAACTTCGTCG GCGCGCGCCTGGCTGCCGG TGT CCAGCA-CCAGG-GTGCGC TTCTGGGTATCGATC TERM 2894 3746478 - 3746496 + g 81 -3 -5.00616 | overlap 3746462 3746484 CGTTCCTGGGTCGGA CCGCATTC CGC GAACGGGG TTTTTTCGAGGGCCG Daci_3414 3746904 - 3746590 - | histone family protein nucleoid-structuring protein H-NS TERM 2895 3746801 - 3746814 + g 75 -4.5 -4.62085 | GTCATTGAGTCCTTG GCGTT TTGG AGCGC TTCTTTTTTGGCCAT TERM 2896 3746925 - 3746947 + r 73 -9 -3.9122 | opp_overlap 3746926, overlap 3746926 GTTCCTTTTTGAAAA ACCCCCTGCC GAT GGCAGAGGGC TTGTTTCACGAAGTG TERM 2897 3746926 - 3746946 + r 70 -12.5 -2.94411 | opp_overlap 3746926, overlap 3746925 TTCCTTTTTGAAAAA CCCCCTGCC GAT GGCAGAGGG CTTGTTTCACGAAGT TERM 2898 3746946 - 3746926 - R 100 -14.7 -4.56597 | opp_overlap 3746926 3746925 TTCCTTTTTGAAAAA CCCCCTGCC GAT GGCAGAGGG CTTGTTTCACGAAGT Daci_3415 3747659 - 3746973 - | hypothetical protein Daci_3416 3749112 - 3747721 - | hypothetical protein TERM 2899 3747905 - 3747921 + g 89 -4.3 -5.27938 | overlap 3747878 3747906 GCAGGCTGCGGGGGT TGGCCTT TGG GGGGCCG TTTTTGTTTGGACAT TERM 2900 3749161 - 3749145 - R 70 -10.1 -3.55444 | opp_overlap 3749144 3749146 CCGCTACTTCGCAAA CCCCCTC ATG GAAGGGG CTTGCTGGAGGGGTT Daci_3417 3749847 - 3749182 - | hypothetical protein Daci_3418 3750020 - 3750214 + | hypothetical protein Daci_3419 3750207 - 3750518 + | hypothetical protein Daci_3420 3750520 - 3750789 + | hypothetical protein Daci_3421 3750786 - 3751112 + | hypothetical protein Daci_3422 3751109 - 3751444 + | hypothetical protein Daci_3423 3752096 - 3751659 - | hypothetical protein Daci_3424 3752222 - 3752536 + | hypothetical protein Daci_3425 3752671 - 3752988 + | hypothetical protein TERM 2901 3753024 - 3753045 + F 100 -11.6 -5.33124 | opp_overlap 3753019 3753024 3753026 ACCCACCAAACCACA GACCGACG TACCGC CGTCGGTC TTTTCTTTTGTTATT Daci_3426 3753413 - 3755986 + | P4 family phage/plasmid primase TERM 2902 3756463 - 3756446 - g 89 -2.6 -5.24531 | overlap 3756461 ATTTTCCAGAAAAAA GCCCCC AGGGAA AAGGGC ATCGGAAAAATGCCA TERM 2903 3756509 - 3756486 - g 79 -5.1 -4.75404 | AAATGCCAGGAAAAA GGCCCCCAG AAAAAG CGGGGTGCC AAAAGTCAGACCTCT Daci_3427 3755997 - 3756611 + | hypothetical protein TERM 2904 3756677 - 3756698 + T 82 -11.6 -3.98282 | opp_overlap 3756675 AGCGCACGAAAATGT TCGGCAGC CTAAAA GCTGCCGA TTTCATTCCTGTCAC TERM 2905 3757741 - 3757757 + T 72 -11.5 -3.41602 | opp_overlap 3757741 TAGTGACGCAAAAAA GCCCCGT CGC GCGGGGC TTGTGCTGGGGTAGG TERM 2906 3757757 - 3757741 - T 100 -10.8 -5.09895 | opp_overlap 3757741 TAGTGACGCAAAAAA GCCCCG TCGCG CGGGGC TTGTGCTGGGGTAGG TERM 2907 3758105 - 3758089 - T 100 -10.8 -5.15634 | opp_overlap 3758089 3758090 TAGTGCATGAAAAAA GCCCGC ACAAG GCGGGC TTCGTCGGGTGATTC TERM 2908 3758615 - 3758593 - T 77 -3.4 -5.0133 | opp_overlap 3758610 CACGGGCGCAAAAAA GCCGCA TTGCTATCGGG TGCGGC TTACCGCGTATCTCT Daci_3428 3759309 - 3758740 - | hypothetical protein Daci_3429 3760491 - 3760976 + | hypothetical protein TERM 2909 3761701 - 3761712 + G 76 -2.2 -4.72986 | gap 1, opp_overlap 3761696 3761699, overlap 3761700 3761699 GCTCTACAACCGATC CGACC GTC GG-CG TTTTTACTGGCGCTG TERM 2910 3762462 - 3762449 - g 72 -3.8 -4.65895 | CTGTTGACGGAAAAA GTGC TGTTAG GCAC CTGGCGCACGACGAC TERM 2911 3762659 - 3762671 + G 76 -2.6 -4.77165 | GTGCGGCAATTGGGC CTCG CTAAA CGGG TTTTCTTGTACAAGG Daci_3430 3760973 - 3763219 + | terminase GpA TERM 2912 3763573 - 3763588 + F 100 -11.8 -5.48028 | CCACCACGGCCTTCA CCCCGC TACT GCGGGG TTTTCTTTTTATTTC Daci_3431 3763674 - 3763916 + | hypothetical protein Daci_3432 3763916 - 3765682 + | lambda family phage portal protein TERM 2913 3766017 - 3766041 + G 79 -5 -4.68724 | gap 1 GTTGACTTAAGGGGC CCGCCA-GG TTCCGGTT CCGTGGCGG TTTTATCTTCAGTAG Daci_3433 3765933 - 3766424 + | hypothetical protein Daci_3434 3766434 - 3766940 + | hypothetical protein Daci_3435 3767612 - 3767980 + | hypothetical protein Daci_3436 3768479 - 3768760 + | hypothetical protein Daci_3437 3768837 - 3769874 + | peptidase S14 ClpP Daci_3438 3769877 - 3770521 + | hypothetical protein TERM 2914 3770511 - 3770525 + F 81 -5.6 -4.7373 | overlap 3770512 TGAGCATCCACACCC CGGCTC TCT GAGCCA TTTTTGATCGACTCA Daci_3439 3770554 - 3771579 + | hypothetical protein TERM 2915 3771621 - 3771650 + G 93 -13.6 -4.13767 | opp_overlap 3771613 CAAGAAATGGCCGAA GGCATCCTCGAC GAAATA GGCGAGGATGCC TTTTACGATGGGGCC Daci_3440 3771591 - 3771899 + | hypothetical protein Daci_3441 3771899 - 3772540 + | hypothetical protein Daci_3442 3772537 - 3773025 + | hypothetical protein Daci_3443 3773125 - 3773880 + | hypothetical protein TERM 2916 3773920 - 3773947 + F 100 -13.4 -5.26119 | CTGCCCGCAGCCCAA CCCGCCACTGCT TTCG AGCGCTGGCGGG TTTTGTTTTTCCGAG TERM 2917 3774442 - 3774389 - f 73 -8.7 -3.90291 | gap 1, opp_overlap 3774379 3774438, overlap 3774375 3774390 3774435 3774439 ACGCCGGCAAGCAAA CGGCCGAGTACCGCAGCCGCCTGCAA GCC TTGGTGGCGGC-GCAGAACCAAGCCA ACCTGGCGCTTGTGA TERM 2918 3774631 - 3774585 - f 84 -11.4 -4.08767 | overlap 3774586 3774588 CGCAGCTGTTGAAAA GCAGGGCGCCGCCATGCGCG AGGCGGG CGCGGCTGCCGACGCCCTGG GCGTGGACGTGACGG TERM 2919 3774630 - 3774586 - f 80 -14.9 -3.05046 | overlap 3774585 3774588 GCAGCTGTTGAAAAG CAGGGCGCCGCCATGCGCG AGGCGGG CGCGGCTGCCGACGCCCTG GGCGTGGACGTGACG TERM 2920 3777156 - 3777142 - g 72 -6.4 -4.30933 | TATAAACTTAAGAAA CTACTC ATC GAGCAG AAAGAACTTGAGATA Daci_3444 3775330 - 3778044 + | phage tape measure protein Daci_3445 3778041 - 3778433 + | putative transmembrane protein TERM 2921 3778675 - 3778717 + F 77 -11.2 -3.61398 | opp_overlap 3778684 CATCCTGTCGGCCAT GCCGAACGACCCCAATGTCA GTG TGACGCTGGCGTCTTGCGGC TTCTTCGCGCGGCGC TERM 2922 3782867 - 3782881 + G 84 -10 -4.43879 | opp_overlap 3782866, overlap 3782829 CAGGCGGCGAACCAG CAGCAC GGC GTGCTG TTTTCCTTCGGTGAT TERM 2923 3783361 - 3783373 + G 70 -9.1 -3.87815 | CGCGGCGTTGGGCAA TGCGG GCG CCGCA TTTATCGACATCACC Daci_3448 3782231 - 3783406 + | hypothetical protein TERM 2924 3784695 - 3784675 - g 89 -3.2 -5.3658 | overlap 3784679 ACGACAAAAATAAAA GGCACTGT GAGTA ACAGCCCC GCCAAATCCCGCGTC Daci_3449 3783406 - 3784881 + | hypothetical protein Daci_3450 3784878 - 3785309 + | hypothetical protein TERM 2925 3786109 - 3786126 + G 70 -9.1 -3.94344 | overlap 3786098 TGTTCAGAGACCCGT GGTCCGC GTCT GCGGATC TTCTGTTTGTGTGCT TERM 2926 3786755 - 3786778 + G 85 -16 -3.65812 | CATGCACCTGCGATA TCCCGCGCCC GCCT GGGCGTGGGA TTCTGTTACCCCGAA Daci_3451 3785313 - 3787205 + | hypothetical protein Daci_3452 3787407 - 3787958 + | putative lysozyme Daci_3453 3787955 - 3788491 + | hypothetical protein Daci_3454 3788769 - 3788476 - | hypothetical protein Daci_3455 3789065 - 3788766 - | hypothetical protein Daci_3456 3789297 - 3789067 - | hypothetical protein Daci_3457 3790138 - 3789329 - | hypothetical protein TERM 2927 3790151 - 3790182 + r 70 -10 -3.53224 | overlap 3790152 CATCACGCCCCCTTG GCTGCTGCCTGGGC TGCG GCCTCGGCGGCAGG TTTGGAGCGCCAGTA TERM 2928 3790152 - 3790181 + r 73 -13.5 -2.71791 | overlap 3790151 ATCACGCCCCCTTGG CTGCTGCCTGGGC TGCG GCCTCGGCGGCAG GTTTGGAGCGCCAGT Daci_3458 3790338 - 3790138 - | hypothetical protein Daci_3459 3791381 - 3790335 - | hypothetical protein TERM 2929 3790676 - 3790694 + g 71 -2.2 -4.58395 | overlap 3790678 3790679 TGTGCAAGGCCACGG GACGGCCG AAG CGGTCTGC TTTTTCGACAGTGCG Daci_3460 3791590 - 3791378 - | hypothetical protein TERM 2930 3791521 - 3791553 + g 76 -14.1 -3.53012 | CCAGGTAGTGGGCTG CCGTGGCCGTGTCCA CAG TAGGCACGGCCAGGG TTTCGAGGGCAGGCG Daci_3461 3792993 - 3791686 - | integrase family protein TERM 2931 3792400 - 3792382 - G 70 -8.8 -3.90318 | GCACCAGTTGATAAA TGCGCTGA TCA TCCGCGCA CCGAGGCGCCCTTGG TERM 2932 3793212 - 3793200 - R 76 -10.5 -3.72775 | opp_overlap 3793199 3793202 3793207, overlap 3793198 ACCCACCAACAAACA CGCGG AAG CCGCG CTATCGTAAAGGTAG TERM 2933 3793202 - 3793238 + r 100 -17.4 -4.76123 | opp_overlap 3793200 3793198, overlap 3793199 3793207 CCACCAACAAACACG CGGAAGCCGCGCTATC GTAAA GGTAGCGCGGCTTTTG TTTTATTCCTACTTT TERM 2934 3793207 - 3793233 + r 100 -15.9 -5.28831 | opp_overlap 3793200 3793198, overlap 3793199 3793202 AACAAACACGCGGAA GCCGCGCTATC GTAAA GGTAGCGCGGC TTTTGTTTTATTCCT TERM 2935 3793551 - 3793585 + r 73 -13.7 -2.79327 | gap 1, opp_overlap 3793551 3793557, overlap 3793557 GGGAACGCGCCCAAA GAAAAAGCCCGCTAGG TTCG CC-AGCGGGCTTTGTC ATTTGGGTCAGGTGC TERM 2936 3793585 - 3793551 - R 90 -15.1 -3.55622 | opp_overlap 3793551 3793557, overlap 3793557 GGGAACGCGCCCAAA GAAAAAGCCCGCTAG GTTCG CCAGCGGGCTTTGTC ATTTGGGTCAGGTGC TERM 2937 3793579 - 3793557 - R 100 -12.7 -5.27335 | opp_overlap 3793557 3793551, overlap 3793551 GCGCCCAAAGAAAAA GCCCGCTAG GTTCG CCAGCGGGC TTTGTCATTTGGGTC TERM 2938 3793557 - 3793579 + r 89 -11.3 -4.14725 | gap 1, opp_overlap 3793551 3793557, overlap 3793551 GCGCCCAAAGAAAAA GCCCGCTAGG TTCG CC-AGCGGGC TTTGTCATTTGGGTC Daci_3462 3794298 - 3793606 - | hypothetical protein TERM 2939 3794155 - 3794183 + g 72 -3.2 -4.64766 | gap 2, overlap 3794165 GGTGTAGTTCTGGCA CGGAC--CACCG CTACACA CGGTGAAGTCCG TTTTTGCAGTGTAGG TERM 2940 3794531 - 3794544 + H 83 -4.5 -5.03994 | opp_overlap 3794522 GAAATAGCCCGATAG GTTCG CCAG CGGAC TTTTTATCTGTGCCA TERM 2941 3794873 - 3794898 + H 88 -7.5 -4.98531 | opp_overlap 3794873 TCAAACTAGATTCAA GCGCCGATTGC TCAC GTAGTCGGGGC TTTTTCGTTTGCGCC TERM 2942 3795513 - 3795462 - H 71 -7.1 -4.19336 | opp_overlap 3795473 3795478, overlap 3795464 3795478 3795490 AACCAGCCTAAGAAA GAGTTTGCCAAGCAAAGGCCGCC CAAGAT GGCGGCCTTTGCTTTTCCGCCGC CACCAGGCGCACCCG TERM 2943 3795473 - 3795502 + H 100 -19.4 -4.07568 | opp_overlap 3795464 3795462 3795478 3795490, overlap 3795478 GAAAGAGTTTGCCAA GCAAAGGCCGCC CAAGAT GGCGGCCTTTGC TTTTCCGCCGCCACC TERM 2944 3795497 - 3795478 - H 86 -12.1 -3.90291 | opp_overlap 3795478 3795473, overlap 3795464 3795462 3795490 AGTTTGCCAAGCAAA GGCCGCC CAAGAT GGCGGCC TTTGCTTTTCCGCCG TERM 2945 3795478 - 3795497 + H 95 -12.1 -4.19735 | opp_overlap 3795464 3795462 3795478 3795490, overlap 3795473 AGTTTGCCAAGCAAA GGCCGCC CAAGAT GGCGGCC TTTGCTTTTCCGCCG Daci_3463 3795600 - 3795905 + | hypothetical protein TERM 2946 3796094 - 3796115 + G 79 -7.9 -4.3898 | overlap 3796095 TGCGGCTCTGGTAGT AGCGCTGGG AGCT TCCAGCGCA TTTTCTGCAGATGAT Daci_3464 3795912 - 3796403 + | hypothetical protein TERM 2947 3796430 - 3796447 + F 85 -12.7 -3.84451 | TTTATCGCTGTTCAC CGCCACC TTCG GGTGGCG TTTCCATTTGGGGCC Daci_3465 3796507 - 3796929 + | hypothetical protein TERM 2948 3797430 - 3797453 + T 100 -12.4 -5.08824 | opp_overlap 3797433, overlap 3797433 ACACGCAGACGAAGA AAAGGCCCGC AGTT GCGGGCCTTG TTTTTTGGGTCAGGG TERM 2949 3797450 - 3797433 - T 100 -14.1 -4.75472 | opp_overlap 3797430 3797433 CGCAGACGAAGAAAA GGCCCGC AGTT GCGGGCC TTGTTTTTTGGGTCA TERM 2950 3797433 - 3797450 + T 100 -14.1 -4.64763 | opp_overlap 3797433, overlap 3797430 CGCAGACGAAGAAAA GGCCCGC AGTT GCGGGCC TTGTTTTTTGGGTCA Daci_3466 3798592 - 3797495 - | hypothetical protein TERM 2951 3798396 - 3798355 - G 73 -7.1 -4.15565 | gap 1 TGGATGAGCTGAAAA CGCCCCCG-CCGCCACCGCC GAT GAGGGTGACGGTCATGGTCG TGATGCCTGCAGGTA TERM 2952 3798837 - 3798847 + r 85 -5.4 -5.10154 | TTGATTGGTGGCGAT TAGC TCT GCTA TTTTTGGTTTTCAAT TERM 2953 3798890 - 3798869 - R 79 -8.7 -4.27316 | opp_overlap 3798869 GTTTTCAATGGAAAA GGCCTCG AGTTAATG CGAGGCC TTTTCCTATGCAAAG TERM 2954 3798869 - 3798890 + r 82 -8.7 -4.34402 | opp_overlap 3798869 GTTTTCAATGGAAAA GGCCTCG AGTTAATG CGAGGCC TTTTCCTATGCAAAG Daci_3467 3800101 - 3798971 - | choloylglycine hydrolase Daci_3468 3800499 - 3800296 - | hypothetical protein Daci_3469 3800771 - 3801247 + | GCN5-related N-acetyltransferase Daci_3470 3801293 - 3802690 + | EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Daci_3471 3803107 - 3802715 - | hypothetical protein Daci_3472 3803218 - 3803691 + | Arc domain-containing protein TERM 2955 3803709 - 3803685 - f 76 -10 -3.75024 | overlap 3803688 CCGCACCAGCAAGAA GACCTGAGGC TGTAG GCCTCAGACC ACGCGTATCGTTGCA TERM 2956 3803904 - 3803882 - g 78 -9.1 -4.2679 | CAAGGTGCAGCAAAA GGCTGGCGA GTTGA TCGACAGCC CCGAGCAACAGGCCA Daci_3473 3803823 - 3804002 + | CsbD family protein TERM 2957 3804023 - 3804055 + T 100 -16.4 -4.10453 | opp_overlap 3804029, overlap 3804029 TCACCCTGCCTTTGC GAACAAGCCCGCCA CACCC TGGCGGGCTTTTTC TTTTCCACGGATTTC TERM 2958 3804029 - 3804049 + T 100 -14 -5.45802 | opp_overlap 3804029, overlap 3804023 TGCCTTTGCGAACAA GCCCGCCA CACCC TGGCGGGC TTTTTCTTTTCCACG TERM 2959 3804049 - 3804029 - T 88 -14 -3.61398 | opp_overlap 3804023 3804029 TGCCTTTGCGAACAA GCCCGCCA CACCC TGGCGGGC TTTTTCTTTTCCACG Daci_3474 3805293 - 3804112 - | diguanylate cyclase TERM 2960 3807103 - 3807079 - g 72 -5.8 -4.28994 | gap 2, opp_overlap 3807070, overlap 3807069 GATGACGCAGCAAAA TGCGG-CT-CTC GTG GAGGAGTCCGCA GCGGCGGCCGCCGCC Daci_3475 3805634 - 3807196 + | methyl-accepting chemotaxis sensory transducer TERM 2961 3807251 - 3807232 - T 100 -15 -5.29782 | opp_overlap 3807235 CACACGCAGAAAAAA GGACCGCC CGAG GGCGGTCC TTGAAGAGAAAAGCC TERM 2962 3807637 - 3807621 - T 89 -10.8 -4.72272 | opp_overlap 3807611 3807621 TTCTGGCAGCAAAAA GCCCGC ACTTG GCGGGC TCTGTCGCAGCTTGG Daci_3476 3807976 - 3807683 - | histone family protein nucleoid-structuring protein H-NS TERM 2963 3808132 - 3808142 + H 74 -3.2 -4.8667 | CCGAGTCTAGGCGAG TCGG ACG CTGA TTTTTGTAGCGTATG TERM 2964 3808442 - 3808432 - H 70 -3.2 -4.67353 | overlap 3808436 TGAGGGAGGGAAAAA CACA GGG TGCG CGGCGCAAACGGCAG TERM 2965 3808930 - 3808905 - g 78 -8.9 -4.29738 | CGATATCGACGAAAA CATCGGCCAGC TCAC GCGGGCCCATG CATCCACACTGACCG TERM 2966 3810447 - 3810413 - g 71 -10 -3.79747 | gap 1 CCAGCCAGGAGCAAA GCCG-TGGCATTGCC GAGGTG GGCAGCGCCATCGGC CAGATGGACCAGGTC Daci_3477 3808777 - 3810597 + | methyl-accepting chemotaxis sensory transducer with Cache sensor TERM 2967 3810614 - 3810576 - T 82 -11.7 -3.95584 | gap 2, opp_overlap 3810600 3810602, overlap 3810571 3810610 GCTCGACGAAGGAAA CGGCGCCTGCCGCCTGCGC TGA GCGCTGGCA--AGACGCCG AGGCGGTGCCTGGTG Daci_3478 3812120 - 3810630 - | diguanylate cyclase TERM 2968 3810705 - 3810669 - G 93 -17.3 -3.64822 | gap 1 ATGCTCGCAGGCAAA GGCCGGTGAGTCGGCC TCGCCC GGCCG-CTCGCCGGCC ACGAAGTAGCGGTCG TERM 2969 3811506 - 3811525 + g 75 -5.7 -4.46514 | gap 1, opp_overlap 3811505 CGCCAGGGCAAGCAG CGGCAGCA AGGCC TGC-GCCG TTTGTTTGAATGGCT TERM 2970 3812175 - 3812191 + H 89 -12.3 -4.00038 | TGCGCGCGTTCGTCG GGCATGG CGG CCATGCC TTTGTCATGGTGATG TERM 2971 3812536 - 3812547 + H 78 -3 -5.02323 | TCGCACCAAGAATTT GTAA TTAG TTAC TTTTGTTTCTGATGA TERM 2972 3813157 - 3813130 - g 75 -6.3 -4.4773 | gap 1 CGAGAGCAATGAAAA GCTCGATGCGCT GCTGG ACCGCATCG-GC CTGATCGACGGCATT Daci_3479 3812783 - 3813262 + | AsnC family transcriptional regulator TERM 2973 3813362 - 3813383 + F 95 -11.5 -4.62441 | TCCTATGCTGTTGTG GGCCCCCGT ACCA ACAGGGGCC TTTCTTTGTGTACGC TERM 2974 3814355 - 3814333 - g 74 -12 -3.61715 | opp_overlap 3814339 GATCGGCTTCAACAA CGATGTGGCC TGG AGCCACACCG TGTCCACGGCGCGGC Daci_3480 3813419 - 3815869 + | peptidase S45 penicillin amidase TERM 2975 3815931 - 3815956 + T 100 -20.5 -4.14243 | opp_overlap 3815931 CCGGGAGTGCAAAAA GCAACGGGGGC CGAG GCCCCCGTTGC TTTTGGAATGCGCTG TERM 2976 3815956 - 3815931 - T 100 -20.5 -4.62069 | opp_overlap 3815931 CCGGGAGTGCAAAAA GCAACGGGGGC CGAG GCCCCCGTTGC TTTTGGAATGCGCTG Daci_3481 3817991 - 3815976 - | selenide, water dikinase TERM 2977 3817633 - 3817661 + g 70 -8.8 -3.93288 | opp_overlap 3817633 AGGCGCACCACCATA TGCTGCAGTCCA TTGCC TGGACCGCCGCA TTTGCTTCGCTGCAA TERM 2978 3818082 - 3818049 - g 81 -3.1 -5.07567 | gap 1, opp_overlap 3818049 3818068, overlap 3818051 CGATATGTGAAAAAA TGCTT-CAGTGCGCCA GCG TGGCGCAATGCATGGA TATTCCGTTCAAGGA Daci_3482 3818048 - 3818710 + | hypothetical protein TERM 2979 3819607 - 3819585 - g 70 -14.8 -2.74488 | opp_overlap 3819584 CAAGCAGGTCAACGA CGCCTACGGC CAT GCCGTGGGCG ATGTGCTGCTCAAGG TERM 2980 3819819 - 3819829 + G 83 -8.2 -4.57073 | overlap 3819817 GCCTTCGGTCAGCGC GGGC GTC GCCC TTTTTCCCAAGCATG Daci_3483 3818707 - 3819936 + | diguanylate cyclase Daci_3484 3819938 - 3820444 + | OmpA/MotB domain-containing protein TERM 2981 3820624 - 3820682 + T 78 -13.7 -3.14051 | gap 2, overlap 3820662 CCTTCCCCCTCTCTA CCCGCTTCGCGGGGGAGGGGGACGACGCC ATC GGC-TAGGCGCCC-CCGCCGCGAGGCGGC TCTTGCTCGGCGTCC Daci_3485 3822693 - 3820762 - | selenocysteine-specific translation elongation factor TERM 2982 3821337 - 3821348 + g 70 -3.6 -4.46212 | overlap 3821329 CGGCGTTCACGCCGG GCTC GTCG GGGC TTTTGTCGTGGAAGC Daci_3486 3824158 - 3822704 - | selenocysteine synthase TERM 2983 3823136 - 3823166 + g 74 -11.1 -3.72374 | overlap 3823134 CGCAGCCAGGGTGAG CTTGCTCACGCGC AGTGC GCGCTTGAGCGGG TGTTTCTTGATGCGG Daci_3487 3825147 - 3824173 - | formate dehydrogenase accessory protein FdhE TERM 2984 3824332 - 3824350 + g 72 -6.6 -4.3534 | overlap 3824314 CAGGTCGTCGGCCAG GGGCTCGG CCA TCGGGTCC TTTTCCTGGTTGACC TERM 2985 3824710 - 3824684 - G 72 -4.9 -4.4767 | opp_overlap 3824698, overlap 3824685 3824686 GCAGCCATCACAAAA GGCGCCATGCC CACGT GGCGGGCCGCC ACTTCCTTTTGCAGC TERM 2986 3824698 - 3824712 + g 71 -11.4 -3.66908 | opp_overlap 3824686 3824684 3824685 AGGCGCCATGCCCAC GTGGCG GGC CGCCAC TTCCTTTTGCAGCAG TERM 2987 3825201 - 3825164 - R 85 -9.7 -4.59853 | opp_overlap 3825165, overlap 3825166 3825169 3825170 GGAATGTTCCAAAAA GACAATCGCCCAGCGTC CAGG GACGCCGGGCGGCTGGT GGCTTCAGGCGAAAG TERM 2988 3825199 - 3825166 - R 100 -16.7 -3.91164 | opp_overlap 3825165, overlap 3825164 3825169 3825170 AATGTTCCAAAAAGA CAATCGCCCAGCGTC CAGG GACGCCGGGCGGCTG GTGGCTTCAGGCGAA TERM 2989 3825196 - 3825169 - R 95 -14.8 -4.07746 | opp_overlap 3825165, overlap 3825166 3825164 3825170 GTTCCAAAAAGACAA TCGCCCAGCGTC CAGG GACGCCGGGCGG CTGGTGGCTTCAGGC TERM 2990 3825195 - 3825170 - R 89 -18.3 -3.03925 | opp_overlap 3825165, overlap 3825169 3825166 3825164 TTCCAAAAAGACAAT CGCCCAGCGTC CAGG GACGCCGGGCG GCTGGTGGCTTCAGG Daci_3488 3825986 - 3825360 - | formate dehydrogenase, gamma subunit Daci_3489 3826912 - 3825983 - | formate dehydrogenase, beta subunit Daci_3490 3829349 - 3826923 - | formate dehydrogenase, alpha subunit TERM 2991 3828808 - 3828827 + g 79 -2.8 -4.86621 | GCGGTCGATGCCAGC TTCTCGCA CACG TGCAGGAA TTTTTCCTTGGGCGT Daci_3491 3829988 - 3829398 - | molybdopterin oxidoreductase Fe4S4 region Daci_3492 3831509 - 3830346 - | hypothetical protein TERM 2992 3832340 - 3832328 - g 78 -9.1 -4.25104 | overlap 3832339 CTGGTGGCAGCAAAA GCTGG AAA CCAGC CGTACCAAGCCCAGC TERM 2993 3833517 - 3833504 - g 72 -3.8 -4.56597 | CGCGCTGGTCAAAAA GGTC TATGAC GACC GCGCAGCCATGGGCC TERM 2994 3834428 - 3834446 + G 72 -13.2 -3.14564 | opp_overlap 3834431, overlap 3834431 CCAGGACGAGCCGCA GAACCAGG GCG CCTGGTTC TTCGTGCAGCACTAC Daci_3493 3831741 - 3834620 + | alpha-ketoglutarate decarboxylase Daci_3494 3834675 - 3835940 + | 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase TERM 2995 3835967 - 3835996 + F 90 -5.6 -5.1675 | gap 1, opp_overlap 3835967 TCGACACGACGAAAA CCCACC-CTTGGC CGCGT GCCCTGCGGTGGG TTTTTTCATGCATCA TERM 2996 3835996 - 3835967 - f 71 -5.6 -4.33274 | gap 1, opp_overlap 3835967 TCGACACGACGAAAA CCCACC-CTTGGC CGCGT GCCCTGCGGTGGG TTTTTTCATGCATCA Daci_3495 3836004 - 3837458 + | dihydrolipoamide dehydrogenase TERM 2997 3837526 - 3837490 - f 80 -10.9 -3.76125 | opp_overlap 3837492 3837493 3837500, overlap 3837492 3837493 CTAGCCCAAGCCAAA GACCTGAAAGCGCTTGC CCT GCAAGCGTTTTCAGCTT CTGAATACATAGCGA TERM 2998 3837524 - 3837492 - f 86 -13.5 -3.46336 | opp_overlap 3837492 3837493 3837500, overlap 3837490 3837493 AGCCCAAGCCAAAGA CCTGAAAGCGCTTGC CCT GCAAGCGTTTTCAGC TTCTGAATACATAGC TERM 2999 3837492 - 3837524 + F 89 -15.7 -3.36878 | opp_overlap 3837492 3837490 3837493, overlap 3837493 3837500 AGCCCAAGCCAAAGA CCTGAAAGCGCTTGC CCT GCAAGCGTTTTCAGC TTCTGAATACATAGC TERM 3000 3837493 - 3837523 + F 88 -19.2 -2.61912 | opp_overlap 3837493 3837492 3837490, overlap 3837492 3837500 GCCCAAGCCAAAGAC CTGAAAGCGCTTGC CCT GCAAGCGTTTTCAG CTTCTGAATACATAG TERM 3001 3837523 - 3837493 - f 83 -17 -2.6732 | opp_overlap 3837492 3837493 3837500, overlap 3837492 3837490 GCCCAAGCCAAAGAC CTGAAAGCGCTTGC CCT GCAAGCGTTTTCAG CTTCTGAATACATAG TERM 3002 3837500 - 3837516 + F 95 -12.3 -4.21936 | opp_overlap 3837493 3837492 3837490, overlap 3837493 3837492 CCAAAGACCTGAAAG CGCTTGC CCT GCAAGCG TTTTCAGCTTCTGAA Daci_3496 3837556 - 3838659 + | AFG1 family ATPase Daci_3497 3838700 - 3839428 + | hypothetical protein Daci_3498 3840208 - 3839438 - | protein serine/threonine phosphatase TERM 3003 3841078 - 3841126 + G 70 -15.4 -2.78384 | gap 1, opp_overlap 3841066 3841107 3841111 ACACCGGCGTGCAGT TCGCGGGCCAGAGCCTGTCGG GCCAGCAA CTGACGGGCTATG-CCCGCGA TGTGCTGCGCGCCGG TERM 3004 3841642 - 3841629 - g 73 -9.5 -3.85878 | CAAGAACAGGAAGAA GGCGC GCCC GCGCC CGTTCACGAAGCTGC Daci_3499 3840345 - 3842519 + | helicase c2 Daci_3500 3843273 - 3842482 - | putative transmembrane protein Daci_3501 3843435 - 3847019 + | DNA polymerase III, alpha subunit Daci_3502 3847153 - 3847530 + | ATP-dependent Clp protease adaptor protein ClpS TERM 3005 3848040 - 3848028 - g 71 -10.5 -3.7282 | CCACGGCATCAAGAA GGGCG AAC CGCCC GAGCCTGCCAAGGCC TERM 3006 3848755 - 3848715 - g 72 -13.9 -3.13403 | overlap 3848713 GCGCTTCGAGGAACA CCACAGCGTGCAGTACGCC GCC GCCGCCCTGCAGGCTGCGG CCGAGCTGTCGGCCA Daci_3503 3847594 - 3849930 + | ATP-dependent Clp protease, ATP-binding subunit clpA TERM 3007 3849959 - 3849983 + F 100 -17.1 -5.33405 | ATGCCCATCGCGCAA GCCGACAGCCC CCC GGGCTGCCGGC TTTTTCTTTGATCCG Daci_3504 3850014 - 3851468 + | phospholipase D/transphosphatidylase TERM 3008 3851468 - 3851482 + F 76 -7 -4.57073 | overlap 3851469 TTCGCCCCTGCTGTG AGGGCC GGT GGCCCG TTTTTCGCAGGCATA TERM 3009 3852000 - 3851958 - g 72 -3.2 -4.56597 | overlap 3851959 3851961 TGTCTGGCCGAAAAA GGAGGATGGATCCCCAAGCT TCA AGCTCGAGGACCTGGCCCGC GCCAACGGCCTTCTG TERM 3010 3852054 - 3852024 - g 76 -7.6 -4.25104 | overlap 3852025 CCTTCTGCACGAAAA GGCGCACGACG-CG CTGTC CGACGT-GCGCGCC ACCATCGGGCTGGCG TERM 3011 3852667 - 3852645 - g 70 -14.9 -2.70932 | GCGCCGTCTCAACCA CCTGCGCAG CCTGT CTGCGCAGG AGCTGGCGCTGGACC Daci_3505 3851506 - 3852945 + | exonuclease I Daci_3506 3854317 - 3853088 - | nucleoside recognition domain-containing protein TERM 3012 3854308 - 3854294 - G 89 -3.4 -5.31275 | CGCCACCAGAAAAAA GCCCAG CCA CAAGGC ATTCAGCATGGATTC Daci_3507 3854466 - 3854861 + | glyoxalase/bleomycin resistance protein/dioxygenase Daci_3508 3855654 - 3854881 - | trans-aconitate 2-methyltransferase Daci_3509 3855711 - 3856670 + | LysR family transcriptional regulator Daci_3510 3857597 - 3856680 - | LysR family transcriptional regulator TERM 3013 3857286 - 3857268 - G 73 -10.2 -3.86346 | GCACTTCTTCACAAA GCCCGCCA GGA TGTCGGGC AGCAGGCTGTGCAGG TERM 3014 3858279 - 3858308 + G 77 -11.4 -3.85698 | gap 1 AGCGAGGGCTTCAGC GCCGAGGCC-CGC CTGTC GCGCGGCCTGGGC TTTCTGGGCAAGACC Daci_3511 3857664 - 3858542 + | citrate (pro-3S)-lyase Daci_3512 3858624 - 3859628 + | hypothetical protein TERM 3015 3859641 - 3859666 + F 76 -13.3 -3.12351 | gap 1, opp_overlap 3859630 TGAACCCGGCCGCTG GCGGGAGGCGCC CCA GGC-CTTCCCGC TTCCCTATCAGGAGA TERM 3016 3860293 - 3860279 - g 79 -7 -4.3898 | ACGAGCGCGAGAAAA GCGGGC TGG GCCAGC ATGTGGGCGTGTCCC Daci_3513 3859687 - 3860850 + | L-carnitine dehydratase/bile acid-inducible protein F TERM 3017 3861136 - 3861146 + G 75 -8.2 -4.18018 | ATGACGGCGGCATTC GCGG TAT CCGC TTTTCGCTGCACACC Daci_3514 3860850 - 3861671 + | amidohydrolase 2 Daci_3515 3861735 - 3862727 + | hypothetical protein Daci_3516 3862978 - 3862748 - | hypothetical protein TERM 3018 3862915 - 3862961 + g 73 -9.6 -3.83026 | gap 4 GGCAGGCCAGCCAGT GCCGGCGCGA-GGCGCA-CGT-CA CCG TGCACGATGCGCAGTCG-GCCGGC TTTGATCTGGCAAAC TERM 3019 3863054 - 3863031 - H 85 -9.5 -4.58663 | opp_overlap 3863032 3863047, overlap 3863020 3863032 ACCACTGCGCAAAAA GCCCGCGCA GCCACT TGCGCGGGT GTATAAACAGCGCTC TERM 3020 3863053 - 3863032 - H 76 -13 -3.34716 | opp_overlap 3863032 3863047, overlap 3863020 3863031 CCACTGCGCAAAAAG CCCGCGCA GCCACT TGCGCGGG TGTATAAACAGCGCT TERM 3021 3863032 - 3863053 + H 75 -13.7 -2.87211 | opp_overlap 3863020 3863031 3863032, overlap 3863047 CCACTGCGCAAAAAG CCCGCGCAG CCAC TTGCGCGGG TGTATAAACAGCGCT Daci_3517 3863152 - 3863853 + | hypothetical protein TERM 3022 3863900 - 3863884 - T 100 -13.7 -5.14563 | opp_overlap 3863884 CTCCCCAGCAAAAAA GCCGCAC GAT GTGCGGC TTTTTTGTGGGTGCG TERM 3023 3863884 - 3863900 + T 100 -13.7 -5.28176 | opp_overlap 3863884 CTCCCCAGCAAAAAA GCCGCAC GAT GTGCGGC TTTTTTGTGGGTGCG Daci_3518 3864554 - 3863925 - | uracil phosphoribosyltransferase TERM 3024 3864602 - 3864574 - R 100 -8.7 -5.00616 | opp_overlap 3864596, overlap 3864575 3864576 TTCTTCTGGAAAAAA GGGGCGCCGGC ATTTGCG GCCGGCGCCAG GGGGCGGTTCAGTCG TERM 3025 3864601 - 3864575 - R 82 -12.2 -3.60048 | opp_overlap 3864596, overlap 3864574 3864576 TCTTCTGGAAAAAAG GGGCGCCGGC ATTTGCG GCCGGCGCCA GGGGGCGGTTCAGTC TERM 3026 3864600 - 3864576 - R 79 -15.7 -2.75708 | opp_overlap 3864596, overlap 3864575 3864574 CTTCTGGAAAAAAGG GGCGCCGGC ATTTGCG GCCGGCGCC AGGGGGCGGTTCAGT Daci_3519 3865630 - 3864611 - | pyridoxal-5'-phosphate-dependent protein beta subunit TERM 3027 3864733 - 3864750 + g 76 -2.6 -4.72029 | overlap 3864716 3864734 CCAGCGAGAGCGCTC CCGTGG GTTCGA CCACGA TTTTCTTGCGTTCCG TERM 3028 3865696 - 3865663 - R 77 -11.7 -3.56643 | gap 1, opp_overlap 3865657 3865655 3865664, overlap 3865664 TTCAGAGCCCTGAAA TGCGCC-AGCCGTTGC ATG GCAACGGCTGGGTGCT ATGGTGTTTGATGCG TERM 3029 3865664 - 3865695 + r 87 -17.4 -2.98479 | gap 1, opp_overlap 3865664 3865663, overlap 3865657 3865655 TCAGAGCCCTGAAAT GCGCC-AGCCGTTGC ATG GCAACGGCTGGGTGC TATGGTGTTTGATGC TERM 3030 3865695 - 3865664 - R 77 -15.2 -2.73771 | gap 1, opp_overlap 3865657 3865655 3865664, overlap 3865663 TCAGAGCCCTGAAAT GCGCC-AGCCGTTGC ATG GCAACGGCTGGGTGC TATGGTGTTTGATGC Daci_3520 3867262 - 3865736 - | protein of unknown function DUF853 NPT hydrolase putative TERM 3031 3867980 - 3867955 - g 75 -9.7 -4.07885 | overlap 3867958 CATGCGCCCGGAAAA CACCATCGCCC TGCA AGGCGATGACG CAGCCCGCATGCAAA Daci_3521 3867341 - 3868060 + | hypothetical protein Daci_3522 3868057 - 3869340 + | phosphoribosylamine--glycine ligase Daci_3523 3869345 - 3870409 + | coproporphyrinogen III oxidase TERM 3032 3870497 - 3870512 + F 70 -10.4 -3.42197 | overlap 3870490 TTCAATAGCTTGAGG CGCAGC GTTG GCTGCG TTCTCCACTTTCTTC TERM 3033 3871096 - 3871084 - g 72 -6.2 -4.2679 | overlap 3871072 3871094 CAAGGCCGAGGAAAA GGCC AAGAA GGCC GCTTCCAAGAAGGCT Daci_3524 3870659 - 3871444 + | iojap-like protein Daci_3525 3871466 - 3871933 + | hypothetical protein TERM 3034 3872011 - 3872045 + F 100 -15.8 -4.15864 | opp_overlap 3872001, overlap 3872012 TACTATGATTTTGAT AGCCTTCAGCGCTTTG CAA CAAAGGGCTGAAGGCA TTTCTCATTCTTATC TERM 3035 3872012 - 3872044 + F 90 -19.3 -3.08434 | opp_overlap 3872001, overlap 3872011 ACTATGATTTTGATA GCCTTCAGCGCTTTG CAA CAAAGGGCTGAAGGC ATTTCTCATTCTTAT TERM 3036 3872580 - 3872564 - g 72 -15.1 -2.89564 | opp_overlap 3872571 CGCCTATGGCATACA GGGCCGC GCG GCGGCCC ATGTGCAGTGGCTGC TERM 3037 3872571 - 3872628 + G 74 -14.5 -3.01712 | gap 5, opp_overlap 3872564 GGCATACAGGGCCGC GCGGC-GGCCCATG-TG--C-AGTGGCTGC ACG GCAGCTACTCGGGCATCATGGGCCTGCCGC TGTTCGAGACGGCGG Daci_3526 3872061 - 3872675 + | maf protein TERM 3038 3873318 - 3873276 - g 88 -12.7 -4.37886 | gap 1, overlap 3873277 GCATCTCGCAGAAAA TCCCGCAGGGCGAGCGCG ACGCGCTG CGCGCCCGCC-TGCAGGG CCTGGTGGGCACCAA TERM 3039 3873317 - 3873277 - g 80 -16.2 -3.2241 | gap 1, overlap 3873276 CATCTCGCAGAAAAT CCCGCAGGGCGAGCGCG ACGCGCTG CGCGCCCGCC-TGCAGG GCCTGGTGGGCACCA Daci_3527 3872777 - 3874324 + | ribonuclease Daci_3528 3874504 - 3876405 + | hypothetical protein TERM 3040 3877291 - 3877276 - gT 71 -9 -3.71848 | GCCGCCCACGAACAA TGGCTG GATG CAGCCA GCGGGCCGGACTGGC Daci_3530 3878575 - 3877580 - | hypothetical protein Daci_3529 3876415 - 3877644 + | monooxygenase FAD-binding Daci_3531 3881198 - 3878976 - | TonB-dependent siderophore receptor Daci_3532 3882235 - 3881273 - | AraC family transcriptional regulator Daci_3533 3884056 - 3882362 - | feruloyl esterase TERM 3041 3883915 - 3883932 + g 70 -12.7 -3.32844 | overlap 3883880 TGTCAGGCAGGTCGG CGCAGGC GGCC GCCTGCG TTGTGGCATCGGCCA TERM 3042 3884035 - 3884020 - G 91 -11.8 -4.65895 | opp_overlap 3884019, overlap 3884001 CCGTGGATGGAAAAA CGCGCC GCAA GGCGCG TGGGGCGTGGTCGGT TERM 3043 3884132 - 3884159 + r 77 -11.9 -3.63968 | opp_overlap 3884121 3884132 AGGATGACGGGACAA CCCGGCGTGGG CGCTGC CCCGCGCCCGG TTTCAGAGTTTGCGC Daci_3534 3885328 - 3884162 - | putative aminotransferase TERM 3044 3884237 - 3884225 - G 78 -6.9 -4.54727 | CTTGGCAAAGCAAAA GCGCA CCA CGCGC TGGTCGAAGCCGTCG TERM 3045 3885379 - 3885347 - R 79 -8.9 -4.14739 | GGAGGCAGCGGAAAA CGGGAACGGGCCCGC ACT GCGGGCCCGGTGGGG CGGAGGATCAGAGTT Daci_3535 3886367 - 3885387 - | transcriptional regulator CysB-like protein Daci_3536 3886806 - 3886393 - | cobalamin (vitamin B12) biosynthesis CbiX protein Daci_3537 3887926 - 3886817 - | permease YjgP/YjgQ family protein Daci_3538 3889053 - 3887926 - | permease YjgP/YjgQ family protein TERM 3046 3888328 - 3888360 + g 82 -17.8 -3.0792 | gap 1, overlap 3888318 3888316 GCGCGCGGCCATTTC CTCGGCGGCGGCCAG ATTG CTG-CCGCTGCCGAG TTGCGTGCCGTATTC TERM 3047 3888836 - 3888798 - G 70 -14.6 -2.69964 | overlap 3888795 CGGCGAACCAGATCA CCATCTCGCTGTCGCG GTACATG CGCGACAGCGAGCCGA CCACGGCCACGAAAA TERM 3048 3889820 - 3889799 - g 76 -13.7 -3.42574 | gap 1, opp_overlap 3889789, overlap 3889788 CGAACTGCACTACAA CGGCGGCGCC AAG GGCGCCG-CG CCCGTGGTGCTGGTC Daci_3539 3889077 - 3890654 + | leucyl aminopeptidase Daci_3540 3890700 - 3891131 + | DNA polymerase III chi subunit HolC Daci_3541 3893031 - 3891997 - | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding TERM 3049 3892427 - 3892400 - G 70 -4.1 -4.42062 | gap 1, opp_overlap 3892418, overlap 3892380 GATTCGGTAAAGAAA GCCTCGC-GCGA GTCCG CCGCCGCAAAGC CATCGGCCTGCGCCT TERM 3050 3892801 - 3892815 + g 72 -4.2 -4.57073 | GGTCTGCGCGATCAG CTTCAG GCG CGGAAG TTTTTCCAGCAGCTG Daci_3544 3894708 - 3894463 - | phage transcriptional regulator, AlpA TERM 3051 3894727 - 3894746 + r 70 -10 -3.53012 | opp_overlap 3894725 3894727 TGGCCTCAAAGAATA TGGCCAGC GGGT GCTGGTCA TTTAGGACGGACCGC Daci_3545 3895180 - 3894863 - | hypothetical protein Daci_3546 3895545 - 3895901 + | hypothetical protein Daci_3547 3896896 - 3896468 - | hypothetical protein TERM 3052 3896908 - 3896884 - G 89 -7.8 -4.8622 | gap 1, opp_overlap 3896885, overlap 3896885 GCCGGGAATGAAAAA GGCCCGCGAGC AAGT GCT-GCGGGCT TTTGGAGGAAAGTGC TERM 3053 3896885 - 3896907 + g 79 -11.3 -4.07885 | gap 1, opp_overlap 3896884 3896885 CCGGGAATGAAAAAG GCCCGCGAGC AAGT GCT-GCGGGC TTTTGGAGGAAAGTG Daci_3548 3897095 - 3897391 + | hypothetical protein Daci_3550 3899040 - 3898000 - | protein of unknown function DUF900 hydrolase family protein Daci_3549 3897432 - 3898082 + | integrase catalytic region TERM 3054 3898517 - 3898536 + gF 79 -2.2 -4.89852 | GCTGATCCAACTTCA TTCCTT AGGGCAAC AAGGAA TTTTTCTAGGTGTAG TERM 3055 3898725 - 3898742 + gF 91 -7.7 -4.77896 | opp_overlap 3898725 TAAAGACGAGAACGA CCTTTCC TTCT GGAGAGG TTTTTAGCTTGCTTG TERM 3056 3898785 - 3898775 - Gf 72 -3.2 -4.57341 | AAGCTGGGCCAAAAA TCGC TAG GCAA CATTGGGTCAGATCT Daci_3551 3899465 - 3900193 + | hypothetical protein TERM 3057 3900270 - 3900254 - T 100 -15.1 -5.06414 | TGCGCCCAATAAAAA GGCCCGC TGG GCGGGCC TGTGAAGTTGGGCTG Daci_3552 3900685 - 3900287 - | hypothetical protein TERM 3058 3900838 - 3900822 - R 87 -10.1 -4.3467 | ATTGGTATATGAAAA GACCCGT TGA ACGGGCC TCGTCGTCATCAGTC Daci_3553 3901150 - 3900848 - | hypothetical protein Daci_3554 3901560 - 3901826 + | hypothetical protein TERM 3059 3901860 - 3901844 - f 100 -9.3 -5.06816 | overlap 3901845 AGCGCCTAAGAAAAA GGCCCGC TGG GCGGGCA TGGCTGCCTGTGCGG TERM 3060 3901859 - 3901845 - f 82 -12.8 -3.63367 | overlap 3901844 GCGCCTAAGAAAAAG GCCCGC TGG GCGGGC ATGGCTGCCTGTGCG TERM 3061 3902736 - 3902749 + F 100 -9.5 -5.40072 | opp_overlap 3902735 GGCCACTGGATAGAG CCCGC ACCA GCGGG TTTTTTTCACGCCCC TERM 3062 3903172 - 3903192 + F 76 -6.7 -4.53303 | CGAATGCGGGTGGCG CGCCCGACT GGG AGAAGGGCG TTTTCTCTACACCTG Daci_3555 3903616 - 3903987 + | hypothetical protein Daci_3556 3903987 - 3905192 + | Phage-related lysozyme (muraminidase)-like protein Daci_3557 3905404 - 3905730 + | hypothetical protein TERM 3063 3905973 - 3905988 + T 80 -3.2 -5.04325 | opp_overlap 3905974, overlap 3905975 ATGCGTGCAGTTAAA TGCCCA AGTA TGGGTG TTTTTGTAATTTACG TERM 3064 3906191 - 3906173 - T 72 -3 -4.8543 | opp_overlap 3906173 3906175 3906180 3906182, overlap 3906175 TAATCGGCATAAAAA CTCCTCCT TGA ATGAGGTG TTCATTCTATTGTTC TERM 3065 3906780 - 3906765 - T 100 -10.4 -5.95539 | opp_overlap 3906765 GTCGAAATAAAAAAA GCCACC CTCG GGTGGC TTGTGCTTCAGCGCT TERM 3066 3906765 - 3906780 + T 70 -10.4 -3.51032 | opp_overlap 3906765 GTCGAAATAAAAAAA GCCACC CTCG GGTGGC TTGTGCTTCAGCGCT Daci_3558 3907597 - 3906788 - | hypothetical protein TERM 3067 3907168 - 3907182 + g 85 -11.4 -4.25104 | TTGCGAACGGAGTAC CTGCGG CAG CCGCAG TTTTGGTAGAGGGGG Daci_3559 3908484 - 3907954 - | hypothetical protein TERM 3068 3908762 - 3908738 - H 90 -14.4 -3.57561 | TGTGAATGTTGGAAA GCCTTGCTGT GCCGT ACAGCAAGGC CGCTGCAATGATCAG Daci_3560 3909053 - 3909439 + | CrcB protein TERM 3069 3909550 - 3909568 + F 100 -8.8 -5.28481 | opp_overlap 3909550 TTCAGCGCCATGCAA CCCGCC CAGAGGA GGCGGG TTTTTTCATTCCGTC Daci_3561 3909618 - 3910175 + | hypothetical protein Daci_3562 3911194 - 3910223 - | anti-FecI sigma factor, FecR Daci_3563 3911747 - 3911199 - | ECF subfamily RNA polymerase sigma-24 factor Daci_3564 3912351 - 3911929 - | hypothetical protein TERM 3070 3912437 - 3912419 - R 79 -12.4 -3.53012 | CGGTTTGCGGGCAAA GCTCCGCC CAG GGCGAAGC TCCAAGGCTTCGCGC Daci_3565 3913188 - 3912514 - | LexA repressor TERM 3071 3913246 - 3913258 + H 76 -6.3 -4.61527 | CCATCTGATGATTTA TACAG TAT CTGTA TTTTTAACCAGTTTT Daci_3566 3913302 - 3914258 + | asparaginase TERM 3072 3914236 - 3914278 + T 100 -13.2 -4.26351 | CGATGATGCTGGAGC TGGCAGCGCAGCCGCGCGAC TGA GCCGGGCGGCTACGCCGGCA TTTCTTCAGTTGCTG TERM 3073 3914323 - 3914309 - T 100 -11.4 -5.4505 | opp_overlap 3914309 GCGGTCAACAAAAAA GCACCC GGC GGGTGC TTTTTCGTTGCGGCA TERM 3074 3914309 - 3914323 + T 100 -11.4 -4.8622 | opp_overlap 3914309 GCGGTCAACAAAAAA GCACCC GGC GGGTGC TTTTTCGTTGCGGCA Daci_3567 3915006 - 3914350 - | adenylate kinase Daci_3568 3916068 - 3915271 - | 3-deoxy-D-manno-octulosonate cytidylyltransferase Daci_3569 3916319 - 3916137 - | hypothetical protein Daci_3570 3917400 - 3916384 - | tetraacyldisaccharide 4'-kinase TERM 3075 3916692 - 3916639 - G 91 -9.4 -4.88736 | gap 2, overlap 3916641 CAGCATGGAGAAAAA GCCCT-CG-GGCCGGGCAACGGCGGC CACG GCCTCCACGGGCCGTCCGCGCAGGGC CGCCAGGGGAATGCG Daci_3571 3917839 - 3917414 - | biopolymer transport protein ExbD/TolR Daci_3572 3918503 - 3917871 - | MotA/TolQ/ExbB proton channel TERM 3076 3918724 - 3918709 - H 74 -11.8 -3.53091 | overlap 3918695 AGCGGGTTGCGCAAA CGCCGC TGCG GCGGCG AATGGACACTGTGAC TERM 3077 3919285 - 3919295 + G 72 -8.2 -4.07568 | overlap 3919260 GAAGGCGCGGCTGGA GGCC GAA GGCC TTTTCGACGCGGCCC Daci_3573 3918899 - 3920236 + | exodeoxyribonuclease VII, large subunit Daci_3574 3920555 - 3921136 + | superoxide dismutase TERM 3078 3921179 - 3921206 + T 100 -12.8 -4.56597 | opp_overlap 3921186, overlap 3921180 3921186 CCATGTGCACGCAAC CCAAAAAGCCCC GGAC GGGGCTTTTTGC TTTTTGAGGGGAAGG TERM 3079 3921180 - 3921205 + T 89 -16.3 -3.33744 | opp_overlap 3921186, overlap 3921179 3921186 CATGTGCACGCAACC CAAAAAGCCCC GGAC GGGGCTTTTTG CTTTTTGAGGGGAAG TERM 3080 3921199 - 3921186 - T 100 -9.5 -4.75174 | opp_overlap 3921180 3921179 3921186 CACGCAACCCAAAAA GCCCC GGAC GGGGC TTTTTGCTTTTTGAG TERM 3081 3921186 - 3921199 + T 100 -9.5 -5.18355 | opp_overlap 3921186, overlap 3921180 3921179 CACGCAACCCAAAAA GCCCC GGAC GGGGC TTTTTGCTTTTTGAG Daci_3575 3922773 - 3921229 - | major facilitator transporter Daci_3576 3922888 - 3923769 + | LysR family transcriptional regulator Daci_3577 3925024 - 3923804 - | major facilitator transporter TERM 3082 3923973 - 3923926 - G 72 -9.1 -3.97042 | gap 2, overlap 3923927 CCACCACGAAGGAAA TGCGCGC-GCC-CCACAGGTCGG TGGC CCAGCCTGCGGCGGCCGCACCCA GGGCCACGCCCATGG Daci_3578 3925147 - 3925743 + | TetR family transcriptional regulator Daci_3579 3926656 - 3925796 - | PEP phosphonomutase Daci_3580 3927711 - 3926701 - | hypothetical protein Daci_3581 3928751 - 3927756 - | hypothetical protein TERM 3083 3928509 - 3928552 + g 90 -13.8 -4.08064 | gap 1, overlap 3928496 3928507 3928510 GGCGCCCACGGTGCC GCCTGCGCCGGGCCGGTTGTC GAT GACCACCGGCT-GGCCCAGGA TTTTCGACGCACCTT TERM 3084 3928510 - 3928551 + g 82 -17.3 -3.04517 | gap 1, overlap 3928496 3928507 3928509 GCGCCCACGGTGCCG CCTGCGCCGGGCCGGTTGTC GAT GACCACCGGCT-GGCCCAGG ATTTTCGACGCACCT Daci_3582 3928928 - 3930973 + | Fis family proprionate catabolism activator Daci_3583 3931843 - 3930983 - | hypothetical protein TERM 3085 3931148 - 3931134 - G 89 -2.7 -5.27335 | TGCCTGAAATAAAAA CGTGC AGTGA GCGCG CCGAACTCATCCACC Daci_3584 3932942 - 3932010 - | LysR family transcriptional regulator Daci_3585 3933010 - 3933942 + | pyridoxal-5'-phosphate-dependent protein beta subunit Daci_3586 3935155 - 3933959 - | AcnD-accessory protein PrpF Daci_3587 3937782 - 3935155 - | aconitate hydratase TERM 3086 3937228 - 3937244 + g 81 -2.1 -5.055 | overlap 3937229 CAGGCCATCCTGCAC GGTCACC ACG GGGGACA TTTTTTCCAGATTGA TERM 3087 3937273 - 3937311 + g 100 -2.2 -5.626 | overlap 3937274 GATCTGGTGCATGAT CCCGTTCCCTGCGGGGAT CAC ATCCACGTTGGCAAAGGC TTTTTTTGTCCACTC Daci_3588 3938812 - 3937832 - | hypothetical protein Daci_3589 3939289 - 3942651 + | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) TERM 3088 3943424 - 3943396 - g 81 -12.4 -3.96068 | overlap 3943417 CGAGCTCAACAACAA CCTCGACCGGCT GGAAA AGCAGGCCGAGG TGGCGGCCCAGTACA TERM 3089 3944426 - 3944392 - g 72 -9 -4.07568 | GCCCGGCTGGGAAAA CGCGCTGGAGGCCGCG CTG CGCGAGCGCCTGGGCG CGCTGGAAGTGGGCC TERM 3090 3945308 - 3945279 - g 74 -15.7 -3.02471 | overlap 3945264 GCCGCACCATAGAGA CGGCCAGCCAGCA GGCC CGCTCGCTGGCCG ACGAGCAGCAGCGCG Daci_3590 3942698 - 3946312 + | chromosome segregation protein SMC Daci_3591 3946370 - 3947716 + | ZipA TERM 3091 3948739 - 3948759 + G 83 -12.5 -4.03234 | opp_overlap 3948734 AAGGTCAACAGCCTG GCCCAGCAG CGC CAGCTGGGC TTTGTCTCGCGCGAG TERM 3092 3948995 - 3948957 - g 91 -11.7 -4.61231 | gap 2 CGAGATCCGCAAAAA GCGCGTGCGCACGGGCGAC ACC GTGGTC-GTGCGC-CGCGC CGGTGACGTGATCCC TERM 3093 3949397 - 3949363 - g 71 -2.1 -4.57073 | gap 1, opp_overlap 3949373, overlap 3949371 3949373 GACGCGCTGGAAAAA TCCAAGAAG-ACCACG CTGT CGCGGTTCCTCTTCGG CCTGGGCATCCGCCA Daci_3592 3947764 - 3949875 + | DNA ligase, NAD-dependent TERM 3094 3950588 - 3950540 - g 74 -15.2 -3.01712 | gap 1 CGTGGCGCCCGAAGA CCTGGCCGGCCAGGCCAGTGCCG TGGC CGGCAC-GGCCTGGGTGCGCAGG CTGCAGCGCGGCGTG Daci_3593 3949875 - 3950882 + | patatin Daci_3594 3953793 - 3950953 - | CheW protein TERM 3095 3951365 - 3951349 - G 75 -9.4 -4.18018 | CGCGCCCACGCAAAA CGGCAG CCGTC CTGCCG CCACGGGCGAGATGG Daci_3595 3954620 - 3954057 - | NUDIX hydrolase TERM 3096 3954204 - 3954194 - G 71 -2.4 -4.56597 | CGGCCTCGGCAAAAA GGCG GGC CTCC ATGGTCTCGGGGCCT TERM 3097 3954752 - 3954701 - R 100 -19 -4.82901 | gap 4, opp_overlap 3954715 GTGGGTTCAGAAAAA CGA-AGGCCGGC-AGGC--CGGGGAG CGCG CTCCCCGCTGCCTTGCCGGCCTGTCG CCAGGCACAGGGATC Daci_3596 3955463 - 3954768 - | fumarylacetoacetate (FAA) hydrolase TERM 3098 3956053 - 3956082 + G 72 -5.7 -4.25104 | gap 1, overlap 3956051 3956054 TTGCTGGCCGCCGAG C-GCGAAGCCGC AGGCCTG GCGCCTTCGCTG TTTTGCTGGGGCGAC Daci_3597 3955597 - 3956262 + | maleylacetoacetate isomerase Daci_3599 3957359 - 3957024 - | hypothetical protein Daci_3598 3956259 - 3957104 + | hypothetical protein TERM 3099 3957388 - 3957376 - fH 95 -4.7 -5.63103 | GTCGAACCAAAAAAA CGAGC GAG GCACG GGTTTTCGTGGAGGT TERM 3100 3957484 - 3957446 - fH 76 -7.5 -4.48987 | gap 2, opp_overlap 3957458, overlap 3957447 GGGTCACAATCAAAA CGGATGCCCCGC-A-AGCC CCA GGCTATTGCATGGCATCCA CGAACAAGGATGCAG TERM 3101 3957738 - 3957722 - g 73 -7.9 -4.11216 | GCTGGACCCCGAAAA GCTGCTG GAG CTGCAGC GCCAGTACCTGGATG TERM 3102 3958054 - 3958030 - g 74 -11.3 -3.70478 | opp_overlap 3958045 AGAAAGCCATCGAAA CCCAGGGCGAG AGC CTGGCCCAGGG CGTGGCCAACCTGCT TERM 3103 3959080 - 3959116 + G 70 -4.4 -4.46212 | overlap 3959081 TGCCCGTGGGCGGCT CCTATG-CGTCCACCCAG GTG CTGGGTGG-CGACAAGCG TTTTGTGATGGGCGC TERM 3104 3959195 - 3959177 - g 100 -11.7 -5.06414 | overlap 3959179 GCCGGCCAAGAAAAA GCGCAGC TACTG GCTGCGC GAGGACGGCCAGTTG Daci_3600 3957501 - 3959396 + | poly(R)-hydroxyalkanoic acid synthase, class I Daci_3601 3959520 - 3960701 + | acetyl-CoA acetyltransferase TERM 3105 3960806 - 3960834 + F 82 -14.5 -3.21099 | ATACTAGCCATACGG GGGTGCCGGACCC AGA GGTTCAGGCACCC TTGGTGATAACCGGA Daci_3602 3960914 - 3961651 + | 3-ketoacyl-(acyl-carrier-protein) reductase TERM 3106 3961676 - 3961691 + T 100 -10.4 -5.4505 | opp_overlap 3961676 GGTTCGCGCTGCAAA GGAGCC TTCG GGCTCC TTTTTTGTTGGGCAG TERM 3107 3961691 - 3961676 - T 70 -10.4 -3.53012 | opp_overlap 3961676 GGTTCGCGCTGCAAA GGAGCC TTCG GGCTCC TTTTTTGTTGGGCAG TERM 3108 3961756 - 3961733 - T 83 -15.4 -3.01125 | opp_overlap 3961738, overlap 3961738 ATGGCCCAGAAATGA CAAAACCCGC TGAA GCGGGTTTTG TGGAAGATGGGGTCT TERM 3109 3961751 - 3961738 - T 85 -9.5 -4.64846 | opp_overlap 3961738, overlap 3961733 CCAGAAATGACAAAA CCCGC TGAA GCGGG TTTTGTGGAAGATGG TERM 3110 3961738 - 3961751 + T 82 -9.5 -4.37886 | opp_overlap 3961738 3961733 CCAGAAATGACAAAA CCCGC TGAA GCGGG TTTTGTGGAAGATGG Daci_3603 3963343 - 3962369 - | peptidase T2 asparaginase 2 TERM 3111 3962687 - 3962699 + g 71 -10.5 -3.71848 | opp_overlap 3962658, overlap 3962666 GGGCGTGTCGCCCAC GCGCC CGG GGCGC TTGTTGGTCAGCCCG Daci_3604 3964422 - 3963340 - | polar amino acid ABC transporter, inner membrane subunit Daci_3605 3965489 - 3964440 - | polar amino acid ABC transporter, inner membrane subunit TERM 3112 3964972 - 3964962 - G 70 -8.2 -3.85698 | CGCCTTGCTCAGAAA GCCC AGG GGGC CGATGGCCAGAGGGT Daci_3606 3966547 - 3965510 - | extracellular solute-binding protein Daci_3607 3967521 - 3966544 - | RpiR family transcriptional regulator TERM 3113 3967492 - 3967527 + g 91 -9.2 -5.03314 | opp_overlap 3967495 3967499, overlap 3967495 3967516 GGGGTGGAGTTCCAT GAATGAATGAAAGTGA ATGG TCTCTTTCATTCATTA TTTTTTAAGAATGAA TERM 3114 3967495 - 3967524 + g 91 -10.9 -4.62085 | opp_overlap 3967495 3967499, overlap 3967492 3967516 GTGGAGTTCCATGAA TGAATGAAAGTGA ATGG TCTCTTTCATTCA TTATTTTTTAAGAAT TERM 3115 3967704 - 3967729 + r 95 -14.7 -4.07687 | overlap 3967705 3967707 GGGACGACGCTTGTG GCAGGCGGTCC CATG GGACCGCCTGG TTTTCGAGAACGACT TERM 3116 3967705 - 3967728 + r 89 -18.2 -3.04398 | overlap 3967704 3967707 GGACGACGCTTGTGG CAGGCGGTCC CATG GGACCGCCTG GTTTTCGAGAACGAC TERM 3117 3967707 - 3967726 + r 80 -15 -3.08032 | overlap 3967705 3967704 ACGACGCTTGTGGCA GGCGGTCC CATG GGACCGCC TGGTTTTCGAGAACG Daci_3608 3969812 - 3967749 - | ABC transporter related TERM 3118 3969136 - 3969150 + g 75 -5.6 -4.60797 | overlap 3969135 TAGTTGCCGCCATAG CGCGTG ACC TGCGCG TTTTCTATGTGCAGC TERM 3119 3969468 - 3969419 - G 76 -13.6 -3.41051 | gap 3 CCAGGCCCAGGATAA GGGCCTGGGCG-CGC-GGCACGGCA TCA TGC-GCGCCGGCGTCGGCCAGGTCC ACGTGGGCGTGGGCA TERM 3120 3969687 - 3969725 + g 81 -7.3 -4.57341 | gap 1, opp_overlap 3969686, overlap 3969689 GAGCAGGGCGAACAG GCTGGACTTGCCGG-CGC CATT GCGTCCGACAAGGCCGAC TTTTTCACCAGGGTT Daci_3609 3970926 - 3969907 - | hypothetical protein Daci_3610 3972191 - 3970968 - | acyl-CoA dehydrogenase domain-containing protein Daci_3611 3973791 - 3972193 - | AMP-dependent synthetase and ligase Daci_3612 3974965 - 3973967 - | LysR family transcriptional regulator Daci_3613 3975944 - 3974967 - | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase TERM 3121 3975108 - 3975123 + g 70 -4 -4.41895 | gap 1, overlap 3975108 CAGGTCGGGGAAGGC GG-CTTC GAA GAAGTCC TTTTCATTGCCGATT Daci_3614 3977125 - 3975965 - | succinyl-diaminopimelate desuccinylase TERM 3122 3977185 - 3977152 - R 100 -6 -6.04324 | gap 2, opp_overlap 3977151 3977152 3977161 TCAAAAAACAAAAAA GTCGGAG--GGCCGGC TGCC GCCAGCGTGCTCCGAC ATTGTGAACGCTGCG Daci_3615 3978381 - 3977212 - | twitching motility protein TERM 3123 3977449 - 3977470 + g 70 -14.5 -2.70932 | GGTCTGCGAGCCTTC GGCCATGGA TTTT TCCATGGCC TCCTTGACGCCCGAA TERM 3124 3978480 - 3978447 - R 88 -13.7 -3.59979 | overlap 3978448 TCTTGTGACGTGAAA CGGGCGTCCGCTGCC TGGT GGCCGGGGACGCCCT CGAGAGTATGCCTTG TERM 3125 3978479 - 3978448 - R 84 -17.2 -2.75844 | overlap 3978447 CTTGTGACGTGAAAC GGGCGTCCGCTGCC TGGT GGCCGGGGACGCCC TCGAGAGTATGCCTT TERM 3126 3978499 - 3978518 + r 89 -12.2 -4.07568 | GAGTATGCCTTGCTC CATCCCCT GAAC AGGGGATG TTTTGGCGCCGCAAC Daci_3616 3979386 - 3978562 - | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase Daci_3617 3980643 - 3979438 - | hypothetical protein TERM 3127 3979867 - 3979852 - G 79 -4.6 -4.8048 | GCGGTACAGCAAAAA GGCCTT GATC AGGGCC GCATCGCCCGCCACG TERM 3128 3980739 - 3980766 + H 75 -14.2 -2.85351 | TTCTGTTACCTATTC TGGCATGGTCTC GACT GGGGCCATGCCA TCTCGTGTGGCGGGG Daci_3618 3980832 - 3982370 + | methyl-accepting chemotaxis sensory transducer Daci_3619 3983195 - 3982479 - | electron transport complex, RnfABCDGE type, B subunit Daci_3620 3984592 - 3983219 - | polyhydroxyalkanoate depolymerase, intracellular TERM 3129 3984676 - 3984693 + r 70 -4.1 -4.59773 | AAAACCCCTTTGATG CTGTCGC GTAA GTGATAG TTTTTACCGATAGGC TERM 3130 3984756 - 3984787 + r 80 -11.4 -3.72576 | CTGCAATGCAGTCCC CCGCGCTAGGCGGC AAGC GCCGCCTCGGCCGG TTTGGTGCGCGCAAG Daci_3621 3985771 - 3984761 - | tRNA-dihydrouridine synthase A Daci_3622 3986471 - 3986133 - | transposase, IS4 family protein Daci_3623 3986956 - 3986531 - | putative TIS1421-transposase orfA protein Daci_3624 3987191 - 3987012 - | transposase Daci_3625 3987540 - 3987292 - | integrase, catalytic region TERM 3131 3987694 - 3987730 + r 73 -10.2 -3.66288 | gap 1 AGCGAAGCTGGCCGG CGAGATGC-GCCCCA GTGAACTG TGGGGCCGCACCTCG TTGTATTCCCGCCTC Daci_3628 3988748 - 3988482 - | transposase IS3/IS911 family protein TERM 3132 3990098 - 3990081 - g 72 -5.7 -4.35042 | opp_overlap 3990081 3990079 TTGATGAGAAAATAA CAATAAT CTTA ATTATTG TCTTAATTCTGGTGG Daci_3629 3989255 - 3990184 + | acyltransferase 3 Daci_3630 3990417 - 3990842 + | putative TIS1421-transposase orfA protein Daci_3631 3990902 - 3991240 + | transposase, IS4 family protein Daci_3632 3991289 - 3992023 + | hypothetical protein TERM 3133 3992226 - 3992193 - f 70 -5.1 -4.44046 | opp_overlap 3992194, overlap 3992194 TCCAGCCCAAACAAA GCCTCCTCGGTACTC AGAA GGGTTCCGAGTAGGT TTTTGGCGCTTCCAT TERM 3134 3992194 - 3992225 + F 89 -10.8 -4.62471 | opp_overlap 3992193 3992194 CCAGCCCAAACAAAG CCTCCTCGGTACTC AGAA GGGTTCCGAGTAGG TTTTTGGCGCTTCCA Daci_3633 3992401 - 3992745 + | hypothetical protein Daci_3634 3992971 - 3992735 - | hypothetical protein TERM 3135 3993006 - 3992979 - R 100 -10.4 -5.27335 | CTCTCCAAAGAAAAA GCCCCTGGCGCG CACG CACCCCGGGGGC TTGAGGCGCCGCCTA Daci_3635 3993380 - 3993087 - | hypothetical protein TERM 3136 3993690 - 3993711 + G 70 -4.4 -4.46212 | gap 1, opp_overlap 3993689, overlap 3993690 3993691 GCGGATGGCAGCAAG C-CCGCCAG AAGCA TTGGCGGAG TTTTCTGGTGGACGA Daci_3636 3993550 - 3994857 + | response regulator receiver modulated metal dependent phosphohydrolase TERM 3137 3995439 - 3995423 - T 90 -4.3 -5.40474 | overlap 3995425 3995426 ATGCGTTCAAAAAAA GAGGACC CTG GTTCCCC GGGGTCAAGCCATGG TERM 3138 3995446 - 3995425 - T 71 -5.7 -4.34482 | overlap 3995423 3995426 GCGTTCAAAAAAAGA GGACCCTGG TTCC CCGGGGTCA AGCCATGGCTGCTGG Daci_3637 3996171 - 3995482 - | response regulator receiver/ANTAR domain-containing protein Daci_3638 3997322 - 3996174 - | branched chain amino acid ABC transporter periplasmic ligand-binding protein Daci_3639 3999139 - 3997403 - | von Willebrand factor type A TERM 3139 3997864 - 3997838 - G 88 -12.2 -4.25104 | CGTGTTGGACGAAAA GGCGTGGATGGC CAG GCGGTCCACGCC GGTCCCGTGGCCTGC Daci_3640 4000009 - 3999152 - | ATPase Daci_3641 4001119 - 4000082 - | acylamide amidohydrolase TERM 3140 4000706 - 4000748 + g 71 -10.5 -3.72324 | GCCCTCGATGGGCAC CCAGGGCATGATCTTGCGG TACTT CTGCACGATCTCGCCTTGG TTGTTCATGAGGATG TERM 3141 4001143 - 4001170 + r 78 -15.6 -2.52464 | gap 1 TCCTGAAGGGGTTGA GGGGGCGGCG-TG CGG CATCGCTGCCCCC TCGATTCCCGGCCCA TERM 3142 4001194 - 4001230 + r 100 -25.3 -3.61715 | opp_overlap 4001194 CGGCCCACAAAAAAA GGCCCGAACCGCTCC GGGTCAG GGAGCGGTTCGGGCC TTGTTGCCCGACATC TERM 3143 4001230 - 4001194 - R 100 -25.3 -5.60993 | opp_overlap 4001194 CGGCCCACAAAAAAA GGCCCGAACCGCTCC GGGTCAG GGAGCGGTTCGGGCC TTGTTGCCCGACATC Daci_3642 4002836 - 4001427 - | citrate transporter Daci_3643 4004283 - 4002949 - | cytochrome P450 Daci_3644 4004353 - 4005492 + | AraC family transcriptional regulator TERM 3144 4005714 - 4005689 - f 74 -6.7 -4.4009 | TCGCATTGCAGAAAA CGCCGGGGCAG CATG CTGGCGCGACG GGGCATTGCGTGACG TERM 3145 4006767 - 4006747 - g 72 -4.6 -4.46212 | overlap 4006748 CGCTGTACGAGAAAA TCGAGACG CTGCC CGCCTCGC TGCGCGAAGAGATCA TERM 3146 4007642 - 4007630 - g 72 -3.3 -4.63218 | overlap 4007633 GCTGGTGGAAGAAAA CCACC TGC GCTGG GATTCGCTGGGCGAG Daci_3645 4005831 - 4008065 + | isocitrate dehydrogenase, NADP-dependent TERM 3147 4008108 - 4008132 + T 100 -15 -5.1675 | gap 1 AGGCTTCAGCCATGA CCGGCCGACCC GCAA GGG-CGGCCGG TTTTTTCATGCCTGC TERM 3148 4008182 - 4008198 + T 85 -9.3 -4.58395 | opp_overlap 4008182 GCAGGCGAAAAAAAA CCGGCCC AGA GAGCCGG TTTTTGGAAGCTGCG TERM 3149 4008198 - 4008182 - T 100 -11.5 -5.78622 | opp_overlap 4008182 GCAGGCGAAAAAAAA CCGGCCC AGA GAGCCGG TTTTTGGAAGCTGCG Daci_3646 4008567 - 4008220 - | RNP-1 like RNA-binding protein Daci_3647 4008886 - 4008677 - | hypothetical protein Daci_3648 4009240 - 4009641 + | ferric uptake regulator family protein Daci_3649 4009657 - 4010928 + | cobalamin synthesis protein P47K TERM 3150 4011491 - 4011533 + G 71 -2.1 -4.58685 | gap 3, overlap 4011492 4011531 CTATTCCTCGACCTG CCCCTGCTCGGCGGCA-CTG TCGCGC CAGTTGCTG--GAGCAGGGC TTTTTGCAGGCCTTT Daci_3650 4011024 - 4011914 + | putative GTP cyclohydrolase Daci_3651 4011960 - 4012109 + | ribosomal protein L36 TERM 3151 4012373 - 4012414 + G 90 -19.5 -3.18681 | gap 1 ACCTCGATCGCCCAT CGCGCCATCGTCCACGG-GC CCT GCACCGTGGGCAATGGCGTG TTCATCGGCTTCAAC TERM 3152 4012500 - 4012513 + G 71 -2.3 -4.54047 | overlap 4012501 TGGTCGATGGATGCC ACCTG CCGC CAGGC TTTTATGTGCCGTCC Daci_3652 4012106 - 4012666 + | carbonic anhydrase TERM 3153 4012850 - 4012896 + G 76 -13.8 -3.53012 | gap 2, overlap 4012849 4012874 TGGCCACGGTCTACC GCG-TGCTGGCGCAGC-TGGAG CAGGC CGGCATGCTGCGCCAGCAGCGC TTTGCGGCGGGCAAG Daci_3653 4012684 - 4013133 + | ferric uptake regulator family protein Daci_3654 4013905 - 4013120 - | hypothetical protein TERM 3154 4013775 - 4013793 + g 74 -12.4 -3.65351 | GCCTGCAGCAGCCGG GCCTGGTC CAC GGCCAGGC TTTCGGTCAGCGTGG Daci_3655 4014393 - 4013902 - | MarR family transcriptional regulator Daci_3656 4015949 - 4014417 - | hypothetical protein Daci_3657 4018171 - 4015964 - | TonB-dependent receptor TERM 3155 4016531 - 4016558 + g 71 -9.8 -3.7282 | gap 1 CTTGCTGCCCGCCTC CACCTGGC-GGCC CGT GGTCAGCCCGGTG TTGTTGATGGCGTCG Daci_3658 4018665 - 4018294 - | hypothetical protein Daci_3659 4019217 - 4018675 - | hypothetical protein TERM 3156 4019287 - 4019252 - R 95 -11 -4.65895 | gap 1, overlap 4019253 GGCCGGACGCAAAAA TCGGCCTGGCCCGGCCA TCA TGGCCGGG-CTGGCGGC AAAAAGCCCGCAGGG TERM 3157 4019286 - 4019253 - R 86 -14.5 -3.39216 | gap 1, overlap 4019252 GCCGGACGCAAAAAT CGGCCTGGCCCGGCCA TCA TGGCCGGG-CTGGCGG CAAAAAGCCCGCAGG TERM 3158 4019293 - 4019320 + r 100 -13.4 -5.40474 | opp_overlap 4019293, overlap 4019292 GGCTGGCGGCAAAAA GCCCGCAGGGCA TTGC TGACTTGCGGGC TTTTTTTGAGGGGAT TERM 3159 4019320 - 4019293 - R 95 -11.2 -4.56597 | opp_overlap 4019292 4019293 GGCTGGCGGCAAAAA GCCCGCAGGGCA TTGC TGACTTGCGGGC TTTTTTTGAGGGGAT Daci_3660 4019582 - 4019361 - | hypothetical protein Daci_3661 4019792 - 4021054 + | isocitrate dehydrogenase TERM 3160 4021099 - 4021056 - T 90 -18.8 -3.09987 | gap 1 CCAAGATGGATTGAA CTGCGCAGCCACGGCGCGGCG ATC CGCCCCGC-GTGGCCGCGCCA AACTCAAGGCGCCGT Daci_3662 4023496 - 4021103 - | Ig family protein TERM 3161 4021648 - 4021686 + g 72 -5.8 -4.3586 | overlap 4021651 GAGGCTGGGCCGGTG CGATCCTGACCGTATAGG CCG CCTGCCCGGTCAGGCCTG TTTTCGTGTCCGTGG Daci_3663 4024537 - 4023767 - | hypothetical protein TERM 3162 4024757 - 4024775 + G 81 -8.1 -4.56629 | GCGTCCAGTCCGTCG CCCAGCG CGGCA TGCTGGG TTTTCTGCTGTTCTG Daci_3664 4024555 - 4025253 + | aspartyl protease-like protein TERM 3163 4025321 - 4025301 - g 71 -11.1 -3.61902 | GGGCATGACACACAA CGCCTTTCG CAC CGACAGGCG CAGATGGCTGCAGAC Daci_3665 4025290 - 4026414 + | beta-lactamase TERM 3164 4026580 - 4026612 + F 89 -12.1 -4.09117 | TTCCTGGTTCCGGTG CCGGC-CCATGAGCC CCTGA GGC-CATGGCGCCGG TTGTTTCTGCCTCCC Daci_3666 4026649 - 4027719 + | tRNA 2-selenouridine synthase Daci_3667 4028382 - 4027747 - | lysine exporter protein LysE/YggA TERM 3165 4028859 - 4028910 + G 82 -13.4 -3.73968 | overlap 4028905 CCGGCGCGCGGCCCA GGCCGTGCCGCGCGCCAGCCACGG CCTG CCCACGCTGGAGCAGGGCGCGGCC TTTGATACCGCCTTT Daci_3668 4028509 - 4030038 + | transcriptional regulator TERM 3166 4030470 - 4030455 - g 71 -2.4 -4.65916 | overlap 4030456 4030464 CCGAGTGGAAGAAAA CCGCCG AAAG CCGCGA GGCCGCATCCGCCTA Daci_3669 4030151 - 4030948 + | putative lipoprotein Daci_3670 4031329 - 4030994 - | cupin 2 domain-containing protein Daci_3671 4031882 - 4031430 - | activator of Hsp90 ATPase 1 family protein Daci_3672 4032104 - 4033087 + | hypothetical protein Daci_3673 4033099 - 4034520 + | L-carnitine dehydratase/bile acid-inducible protein F Daci_3674 4034505 - 4034900 + | cupin 2 domain-containing protein TERM 3167 4035292 - 4035282 - g 76 -2.4 -4.77438 | overlap 4035283 ACGGACGAGCAAAAA CGCC GCT GGCT GCCCCCGCTGATCGC Daci_3675 4034958 - 4036121 + | acyl-CoA dehydrogenase domain-containing protein TERM 3168 4037164 - 4037184 + G 91 -14.7 -3.90291 | overlap 4037118 CTGGCGGGCGGACCA GCCTGCGGC GTT GCTGCAGGC TTTCATTGAGAGGGT Daci_3676 4036289 - 4037242 + | LysR family transcriptional regulator Daci_3677 4037543 - 4037223 - | hypothetical protein TERM 3169 4037328 - 4037342 + g 89 -7.1 -4.82901 | opp_overlap 4037338, overlap 4037338 4037338 GGTGATGGCCTCCAC GTGCC AAAAA GGCAC TTTTTCTCCCGGAGA TERM 3170 4037367 - 4037338 - G 75 -5.1 -4.58395 | gap 1, opp_overlap 4037328 4037338 4037338, overlap 4037342 4037361 4037363 TCCACGTGCCAAAAA GGC-ACTTTTTCTC CCG GAGAAAACGTCACC TTGGTGATGTCGAAT TERM 3171 4037453 - 4037466 + g 86 -6.7 -5.08824 | TAAAGTCATGGTTTT CGCAA GCGG TTGCG TTTTTTGCGTCCCCG Daci_3678 4038471 - 4037740 - | hypothetical protein TERM 3172 4038184 - 4038199 + g 84 -5.4 -4.99035 | GCCAATTACCATTTT TCCAGG AGAC TCTGGA TTTTTGTCTCCGTAC Daci_3679 4041831 - 4038892 - | PAS/PAC sensor hybrid histidine kinase TERM 3173 4039080 - 4039096 + g 70 -12.3 -3.33696 | overlap 4039069 CCAGGCGTGCCTCGT CGGCAAG CTG CTTGCCG TTCATTCCGCCGCGA TERM 3174 4040299 - 4040286 - G 79 -3.1 -4.82667 | gap 1, opp_overlap 4040287, overlap 4040287 GGATGAGATGAAAAA GCGTGG TGC CCA-GC AGCTCGTCTTCACGC TERM 3175 4041325 - 4041340 + g 85 -11.8 -4.25104 | GGCAATCGCCAGTTG CGCCCG CAGC CGGGCG TTTTCCTCGCGAAGC Daci_3680 4041985 - 4043085 + | porin Daci_3681 4043207 - 4044787 + | hypothetical protein TERM 3176 4045303 - 4045330 + G 73 -12.6 -3.53091 | GCGTTGGGCGCATGA CGCCCGGCGAGC GACG GCTGGCCGAGCG TTTGGAGCAAAAGCT Daci_3682 4045257 - 4047062 + | NERD domain-containing protein Daci_3683 4047637 - 4047179 - | hypothetical protein Daci_3684 4050216 - 4048972 - | hypothetical protein Daci_3685 4050968 - 4050648 - | hypothetical protein TERM 3177 4052049 - 4052067 + H 73 -8.8 -3.89614 | opp_overlap 4052048, overlap 4052054 AGGTGGCAGACAACG GCTTGGCG AAG CTCCAAGC TTTGCTATCTGGCTT Daci_3686 4052136 - 4052513 + | hypothetical protein TERM 3178 4052602 - 4052580 - T 100 -13.4 -5.41746 | overlap 4052568 AATGGGCGAAAAAAA GCGCGCCCCA TGC TGAAGCGCGC TGCCGGGTTGGGGCC Daci_3687 4053168 - 4052623 - | peptidase Daci_3688 4054513 - 4053311 - | tryptophan synthase subunit beta TERM 3179 4054153 - 4054178 + g 81 -2.3 -5.07486 | opp_overlap 4054111, overlap 4054151 GGGCCACGCCGTGCT GGCCGGCGCCG GTTT CTGCGATGACC TTTTTCTTGCCCATG Daci_3689 4056409 - 4054556 - | hypothetical protein TERM 3180 4054604 - 4054632 + g 72 -8.8 -4.07568 | gap 1, overlap 4054589 4054589 GGCTTGTGGCCTGAG GGGCGCAAGGCCT TCTT GGGCCT-GCGCAC TTTTCAGGGCAAGGG TERM 3181 4055021 - 4055008 - G 89 -3.8 -5.27938 | ACTGGGAAACAAAAA TGGC TTGGTT GCCA TCCTGGAGTGCCATT TERM 3182 4055944 - 4055927 - G 72 -3.5 -4.66163 | gap 1 ACCTTGATCCAAAAA TATGGAGC TCA GCTC-ATA GGAAAATAGCTGGGG Daci_3690 4057411 - 4056518 - | 3-hydroxyisobutyrate dehydrogenase TERM 3183 4056915 - 4056945 + g 81 -3.1 -5.00616 | overlap 4056916 4056917 GTCTGGCCCGCGCCC ACGGCGCCGGCGT GGAAG ATGTTGGCGCCCA TTTTTTCGAGCAGGG Daci_3691 4057898 - 4057449 - | hypothetical protein Daci_3692 4058384 - 4057920 - | hypothetical protein Daci_3693 4059574 - 4058408 - | acyl-CoA dehydrogenase domain-containing protein TERM 3184 4058950 - 4058970 + g 100 -12.6 -5.57396 | AGCTGATGACGCGCG TGGGCTGG CTGTT CCAGCCCA TTTTTTCTTCCTTCT Daci_3694 4060056 - 4059655 - | hypothetical protein Daci_3695 4061641 - 4060118 - | methylmalonate-semialdehyde dehydrogenase TERM 3185 4061697 - 4061715 + r 70 -5.2 -4.56775 | overlap 4061698 TGCGCCGGGCGTTCA TCGCATGG TAG CTGTGCGG TTTTTCGCAAGCAAT TERM 3186 4061814 - 4061782 - R 100 -17.8 -5.00616 | opp_overlap 4061784, overlap 4061784 GGCGGGCGCAAAAAA GAGCATGGCCTGCG GCAGG CGCAGGCCATGCTG GTTCAGGCGCTCAGC TERM 3187 4061784 - 4061812 + r 95 -20.4 -2.71364 | opp_overlap 4061782 4061784 CGGGCGCAAAAAAGA GCATGGCCTGCG GCAGG CGCAGGCCATGC TGGTTCAGGCGCTCA TERM 3188 4061812 - 4061784 - R 100 -20.4 -4.13561 | opp_overlap 4061784, overlap 4061782 CGGGCGCAAAAAAGA GCATGGCCTGCG GCAGG CGCAGGCCATGC TGGTTCAGGCGCTCA Daci_3696 4062380 - 4061925 - | MarR family transcriptional regulator TERM 3189 4063309 - 4063325 + G 73 -7.9 -4.13767 | GGTCGATGCCCTCAA TCGCGAG ATC CGCGCGA TTTTGGCGTCGGAGG Daci_3697 4062470 - 4063474 + | hypothetical protein Daci_3698 4063510 - 4064763 + | hypothetical protein Daci_3699 4065815 - 4064778 - | hypothetical protein Daci_3700 4066573 - 4065932 - | maleylacetoacetate isomerase Daci_3701 4067342 - 4066593 - | fumarylacetoacetate (FAA) hydrolase Daci_3702 4068376 - 4067339 - | cupin 2 domain-containing protein Daci_3703 4069601 - 4068393 - | salicylate hydroxylase TERM 3190 4069580 - 4069568 - G 71 -10.5 -3.78934 | CGCCCGCCACAAGAA CGGGC AGC GCCCG GGAAGAAATGCTGGT TERM 3191 4069783 - 4069739 - H 71 -7.3 -4.19817 | gap 3, overlap 4069740 4069742 TGGATGCAGGCAAAA CGAC-GGCGGACAGCGTG-TCC GGGT GAATCAC-CTGTCCGCCAGCCA AGGCCAACGGAGGGC TERM 3192 4069938 - 4069886 - g 71 -2.6 -4.58466 | gap 1, opp_overlap 4069890 4069892, overlap 4069887 4069889 4069890 CGCAGAACTAGAAAA CTACCCCGGCTACCAC-ATCCGCCG CCTG CAGCAGATCGCGGTAGCCGTCTTCA TGGAGGAGACCCAGG TERM 3193 4070326 - 4070285 - g 75 -10 -4.07568 | gap 1 CCTGGTGCGGCAAAA CGACGAGCTGGC-GCGTGC GCCCA GCACGCTGGCCGCGCGCCG CGCCGCAGCCGACTG Daci_3704 4069806 - 4070342 + | MarR family transcriptional regulator Daci_3705 4070357 - 4071259 + | LysR family transcriptional regulator Daci_3706 4071335 - 4072381 + | patatin Daci_3707 4073677 - 4072403 - | glycine hydroxymethyltransferase TERM 3194 4072964 - 4072988 + g 70 -12.7 -3.38272 | opp_overlap 4072960, overlap 4072966 CTTGGACAGGATCAG GCCGCCGCGCG GGC CGCGCAGCGTC TTGTGCGTGGTGCTG TERM 3195 4072966 - 4072986 + g 74 -13.9 -3.25896 | opp_overlap 4072960, overlap 4072964 TGGACAGGATCAGGC CGCCGCGCG GGC CGCGCAGCG TCTTGTGCGTGGTGC Daci_3708 4074962 - 4073724 - | acetylornithine and succinylornithine aminotransferase Daci_3709 4075872 - 4075021 - | alanine racemase domain-containing protein Daci_3710 4077133 - 4075877 - | benzoate transporter TERM 3196 4077675 - 4077715 + G 74 -12.4 -3.61398 | gap 1, overlap 4077676 CCAGGTGGCCGCAGC GGGCAGGGCCGGTGCCGGC CTGA GCCGGCGC-GGCCAGGCCA TTGTTGACGGCGGAG TERM 3197 4077676 - 4077714 + G 74 -15.9 -2.76696 | gap 1, overlap 4077675 CAGGTGGCCGCAGCG GGCAGGGCCGGTGCCGGC CTGA GCCGGCGC-GGCCAGGCC ATTGTTGACGGCGGA Daci_3711 4077325 - 4078839 + | transcriptional regulator Daci_3712 4080150 - 4078870 - | serine hydroxymethyltransferase TERM 3198 4079082 - 4079095 + g 73 -9.5 -3.95324 | GCGGCCGCGCGCCAT CGCCG GGCA CGGCG TTCTTGTTGACCGTG TERM 3199 4079419 - 4079443 + g 70 -12.7 -3.38272 | opp_overlap 4079415, overlap 4079421 GGCCGAGAGGATCAT GCCGCCGCGCG GCC CGCGCAGCGTC TTGTGCGTGGTGGTC TERM 3200 4079421 - 4079441 + g 74 -13.9 -3.25896 | opp_overlap 4079415, overlap 4079419 CCGAGAGGATCATGC CGCCGCGCG GCC CGCGCAGCG TCTTGTGCGTGGTGG TERM 3201 4080708 - 4080698 - g 71 -2.4 -4.57569 | CGATGCGCTCAAAAA GCTG TCC CTGC TGTGGAAGTCAAGAG Daci_3713 4080645 - 4081607 + | hypothetical protein TERM 3202 4082047 - 4082095 + G 74 -12.4 -3.54424 | overlap 4082051 GCGCGAACTGGATCG GCTGCAGCAGCAGGGCCG-GCGCG TGC CGCGCACCACGCTGCTGCTGT-GC TTTGCACGCATGGCC TERM 3203 4082051 - 4082092 + G 72 -15.1 -2.90813 | gap 1, overlap 4082047 GAACTGGATCGGCTG CAGCAGCAGGGCCG-GCGCG TGC CGCGCACCACGCTGCTGCTG TGCTTTGCACGCATG Daci_3714 4081604 - 4082683 + | ferredoxin Daci_3715 4082735 - 4083439 + | glutamine amidotransferase Daci_3716 4083534 - 4083902 + | antibiotic biosynthesis monooxygenase TERM 3204 4083996 - 4083967 - T 74 -11.3 -3.53811 | overlap 4083970 TGCACGCCCTCGAAA GATGCCGGCAGTG ACTA CGCTGCCGGCGCC AGGCCGGAAAAAAAG TERM 3205 4083993 - 4083970 - T 72 -13.8 -2.60615 | overlap 4083967 ACGCCCTCGAAAGAT GCCGGCAGTG ACTA CGCTGCCGGC GCCAGGCCGGAAAAA TERM 3206 4084011 - 4084032 + T 100 -10.1 -5.40072 | opp_overlap 4084011 CAGGCCGGAAAAAAA GCCCGCTGA ATGC TCAGAGGGC TTTTTTTCGGCAGGC TERM 3207 4084032 - 4084011 - T 100 -10.1 -5.41143 | opp_overlap 4084011 CAGGCCGGAAAAAAA GCCCGCTGA ATGC TCAGAGGGC TTTTTTTCGGCAGGC Daci_3717 4084526 - 4084116 - | histone family protein nucleoid-structuring protein H-NS TERM 3208 4084280 - 4084291 + g 82 -3.6 -5.02476 | GATCGCGATACTTCG CCGG CGCA CTGG TTTTTTCAGGGATGT Daci_3718 4084867 - 4084523 - | hexapaptide repeat-containing transferase TERM 3209 4084881 - 4084902 + H 78 -3 -5.13521 | opp_overlap 4084881 ATGATGCAGTCGAAA TTGGCG TAGAAGTTGT CGCCAA TTTTTTGACTCGTTT Daci_3719 4085818 - 4086285 + | hypothetical protein TERM 3210 4089453 - 4089420 - g 74 -12.3 -3.54459 | overlap 4089424 CCAACCGCCTGCAAA GCTATGCCCAGACGC TGCA GCGCCCGGGCAGCGC GGCGCAGAACAGCAA Daci_3720 4086686 - 4090591 + | YD repeat-containing protein Daci_3721 4091362 - 4091601 + | hypothetical protein Daci_3722 4091982 - 4091644 - | transposase, IS4 family protein Daci_3723 4092467 - 4092042 - | putative TIS1421-transposase orfA protein Daci_3724 4092587 - 4093444 + | Rhs family protein-like protein Daci_3725 4093579 - 4093908 + | hypothetical protein Daci_3726 4094148 - 4094816 + | hypothetical protein Daci_3727 4095126 - 4095689 + | hypothetical protein TERM 3211 4095746 - 4095776 + F 70 -12.7 -2.91383 | gap 1, overlap 4095734 CGCCTAGGGCGGCGA TGCCTTGCCGAGCT GGTT AG-TCGGCGAGGCA TCTATGGATAGAAAT TERM 3212 4096420 - 4096460 + G 75 -9.5 -4.07885 | opp_overlap 4096415, overlap 4096421 CCAGATCGAAGGCCG CCGCATCACCCGCTACTGC GGC GTGGTCGCGGGCGAGGCGA TTTTGGGCGCCAATG TERM 3213 4096606 - 4096586 - g 86 -18.3 -3.16039 | AAGGAGCTGGAGGAA CGCGCCCAG GAA CTGGGCGCG AATGCCGTGGTGGGG Daci_3728 4096385 - 4096705 + | hypothetical protein TERM 3214 4096809 - 4096754 - T 74 -12.5 -3.19936 | gap 2, opp_overlap 4096797 4096801, overlap 4096759 AATCAGGCAAGGGAA GTCAACGC-GGCGCTGCGCC-CGGCAT CTGC AGGCAGCGGCCCAGCGCCCGCGCTGCC TCGCCCAGGCGCGGG Daci_3729 4097693 - 4096755 - | periplasmic binding protein Daci_3730 4099612 - 4097699 - | TonB-dependent receptor TERM 3215 4099692 - 4099664 - H 100 -15.2 -4.14725 | opp_overlap 4099661 CACGGAAACCACAAA GACCGGCTGCGC TGCAT GCGCGGCCGGCC GCCTGTTGGCCGGTA TERM 3216 4099823 - 4099853 + H 80 -11.2 -3.71649 | gap 1, opp_overlap 4099825 GTTGCGGGGGCAGTA CATGCGGGCGGCT TTATCT GGCCGCCC-CATG TTTCCCGTTTAACCG Daci_3731 4100005 - 4100394 + | hypothetical protein TERM 3217 4100461 - 4100481 + F 74 -6.7 -4.4261 | overlap 4100464 4100465 TGCTGTGCAAGGTCC GCTGCCCCC CGA GGGGGTGCC TTTTCATCTTGGGGC Daci_3732 4100506 - 4100697 + | XRE family transcriptional regulator Daci_3733 4101540 - 4100707 - | hypothetical protein TERM 3218 4102265 - 4102225 - g 78 -17 -2.82516 | opp_overlap 4102233 4102246, overlap 4102227 TTTTCCAGCAGCACA CAGGCATGGCCT-TTGGCGC CTG GCGCCAGCAGGCC-TGCCTG CTGGCGGCGGTGTCG Daci_3734 4101642 - 4102409 + | AraC family transcriptional regulator Daci_3735 4103617 - 4102406 - | major facilitator transporter TERM 3219 4102838 - 4102780 - G 83 -19.5 -2.71712 | gap 1, overlap 4102779 TGCGCTGCGCGAAAC CCTGGTCGGCCCAGTGGCCGGCACGGGC TGCT GCCAGTG-CGCCCACCACGCCGGCCAGG CCAAAGGCGCCGATG Daci_3736 4103736 - 4104143 + | HxlR family transcriptional regulator Daci_3737 4104153 - 4104638 + | rod shape-determining-related protein TERM 3220 4104683 - 4104664 - T 100 -15 -5.14563 | opp_overlap 4104664 CTCTCCATGAAAAAA GCGCCCGT CACA ACGGGCGC TTTGTCTGGGTCAGC TERM 3221 4104664 - 4104683 + T 95 -15 -4.0641 | opp_overlap 4104664 CTCTCCATGAAAAAA GCGCCCGT CACA ACGGGCGC TTTGTCTGGGTCAGC Daci_3738 4106731 - 4104734 - | TonB-dependent receptor Daci_3739 4108540 - 4107092 - | D-alanine/D-serine/glycine permease TERM 3222 4107524 - 4107497 - G 78 -9.1 -4.26076 | overlap 4107499 GCAGGTGCAGGAAAA CAGCAGCCCGC GCGAAG GCACGCTGCTG CGCGACAGCCGGTGG Daci_3740 4109227 - 4108817 - | hypothetical protein TERM 3223 4108850 - 4108901 + g 86 -12.8 -4.19238 | gap 1 CTTGGCATTGGCCAC CGCCGTGCGGTGCACGG-GGGCCAG GCC CTTGCCCACCACGCCCCACATGGCG TTTTGCCATTGCGAG Daci_3741 4110401 - 4109310 - | hypothetical protein TERM 3224 4110093 - 4110081 - G 72 -4.7 -4.45544 | overlap 4110083 GCCGATGAAGGAAAA GGGCG AGG CGCGC TCGGCAAACACCGGG TERM 3225 4110543 - 4110520 - R 100 -14.6 -5.65927 | opp_overlap 4110520 CATGTAAACAAAAAA GGAGCTGCCC CTGC AGGCAGCTCC TTGTCGTGATGGCCG TERM 3226 4110520 - 4110543 + r 86 -13.9 -3.44051 | opp_overlap 4110520 CATGTAAACAAAAAA GGAGCTGCC CCTGCA GGCAGCTCC TTGTCGTGATGGCCG Daci_3742 4112204 - 4110570 - | EmrB/QacA family drug resistance transporter Daci_3743 4113611 - 4112250 - | secretion protein HlyD family protein TERM 3227 4112748 - 4112767 + g 70 -8.6 -3.93369 | gap 1 GGTCTTCTGGCCTAT GCGCAGCTG GGC CAGCTG-GC TTTCCTTGAAGTTGG Daci_3744 4115219 - 4113744 - | RND efflux system outer membrane lipoprotein Daci_3745 4115826 - 4115290 - | MarR family transcriptional regulator Daci_3746 4116305 - 4115991 - | hypothetical protein Daci_3747 4116626 - 4117363 + | AzlC family protein Daci_3748 4117367 - 4117663 + | branched-chain amino acid transport Daci_3749 4117727 - 4118071 + | hypothetical protein TERM 3228 4118079 - 4118100 + F 100 -12.3 -5.56568 | opp_overlap 4118077, overlap 4118077 ACGTCTGAATGGACA TGGCTCGTG CTTT CACGGGCCA TTTTTTTGATGATAT Daci_3750 4118353 - 4119954 + | methyl-accepting chemotaxis sensory transducer TERM 3229 4119965 - 4119991 + T 100 -15.2 -4.91852 | CTTGACGCAGACCCG GGAAGAGCGTGC GCA GTGCGCTCTTCC TTTCTTTTTGATCAG TERM 3230 4120053 - 4120073 + T 77 -14.7 -2.82623 | opp_overlap 4120053, overlap 4120050 TCAAAAATAGAAAAA GCCGCCGTT TTG AGCGGCGGC TGCTTGTCAGGAACA TERM 3231 4120073 - 4120053 - T 100 -12.5 -5.36364 | opp_overlap 4120053 4120050 TCAAAAATAGAAAAA GCCGCCGTT TTG AGCGGCGGC TGCTTGTCAGGAACA Daci_3751 4122037 - 4120094 - | AMP-dependent synthetase and ligase TERM 3232 4120889 - 4120836 - G 88 -12.3 -4.38712 | gap 1, overlap 4120838 CCCAGGCCCAGAAAA CA-GCGCGCAATCGTCGGCGACAGCG GCG CGCCGCCACTGACGGCCACGCGCACG CGGCCACCGAACTGG TERM 3233 4120886 - 4120838 - G 95 -17.3 -3.80133 | overlap 4120836 CAGGCCCAGAAAACA GCGCGCAATCGTCGGCGACAGCG GCG CGCCGCCACTGACGGCCACGCGC ACGCGGCCACCGAAC TERM 3234 4122145 - 4122159 + r 75 -7.8 -4.16943 | overlap 4122146 CGGCGCACGCGTTTA TGCTGC ACT GCAGCG TTTTCGGGTGTCCAC Daci_3752 4122949 - 4122314 - | GntR family transcriptional regulator Daci_3753 4123025 - 4125241 + | methylmalonyl-CoA mutase TERM 3235 4125680 - 4125655 - gf 72 -6.1 -4.36914 | gap 1, opp_overlap 4125640, overlap 4125656 GCGTGGCCGAGAAAA CCCGCGAGGCCA TGC TGGTCT-GCGAG GCGGCTGGCTACGAT Daci_3754 4125204 - 4126325 + | arginine/ornithine transport system ATPase TERM 3236 4127404 - 4127418 + G 70 -9.2 -3.9009 | GAGCTCCATCAAGGC CGCGCG CTT CGTGCG TTTCTGCGATGCCTT Daci_3755 4126382 - 4127914 + | carboxyl transferase TERM 3237 4128098 - 4128061 - f 71 -6.9 -4.19238 | opp_overlap 4128061 4128062, overlap 4128063 TGGCGAAGCGCAAAA CAGGGACAGCGAAGCTG ACGA CAGCTCCGGTTCCCATG ATTTAGTTCCAAGAA Daci_3756 4128126 - 4130174 + | acetyl-CoA carboxylase, biotin carboxylase TERM 3238 4130217 - 4130229 + T 79 -9.1 -4.21194 | opp_overlap 4130212 CCGGGATCAATGCCC CTGGC GCA GCCAG TTTTCGATCCTGAGC Daci_3757 4130615 - 4130208 - | PilT domain-containing protein Daci_3758 4130881 - 4130615 - | SpoVT/AbrB-like protein TERM 3239 4131699 - 4131664 - g 91 -11 -4.58663 | opp_overlap 4131689 4131696, overlap 4131666 ATCACGCCGGAAAAA GTGGGCGCCAGGCTCA AGCT CAAGCCCGGCGCCATC GTGCTGGCCGCCGAT Daci_3759 4131121 - 4132092 + | response regulator receiver modulated CheW protein Daci_3760 4133223 - 4132129 - | LacI family transcription regulator TERM 3240 4132660 - 4132648 - G 72 -9.1 -4.07568 | opp_overlap 4132655 CTCGGCCTGCGAAAA GCCCA CGC TGGGC GCACCAGGCTCGCCG TERM 3241 4132992 - 4133012 + g 85 -11.1 -4.36914 | CGGGCACGTAGCCCA TCTGCGCGG CGG CCGTGCGGA TTTTCTCGACCAGGG TERM 3242 4133345 - 4133366 + H 70 -4.3 -4.56775 | opp_overlap 4133343 4133342 4133347, overlap 4133346 4133347 AGCACACCGAAATCC AAGGCAGAC CCTG GTCTGCCAA TTTTTGCAAGAACAT TERM 3243 4133364 - 4133347 - H 72 -11.3 -3.30038 | opp_overlap 4133347 4133346 4133345, overlap 4133343 4133342 CACACCGAAATCCAA GGCAGAC CCTG GTCTGCC AATTTTTGCAAGAAC Daci_3761 4133380 - 4133967 + | carbohydrate kinase TERM 3244 4134385 - 4134418 + G 73 -12.4 -3.44051 | gap 1 TACCCGCTGGCCCTG GGCGCCGCGGCCACC CTGGT GCTGGCCGTGG-GCC TTCTGGTGGTGACGC Daci_3762 4133986 - 4134492 + | tripartite ATP-independent periplasmic transporter DctQ Daci_3763 4134505 - 4135785 + | TRAP dicarboxylate transporter, DctM subunit TERM 3245 4135953 - 4135963 + G 70 -8.2 -3.90744 | opp_overlap 4135948, overlap 4135952 AGTCCAACCAGGGCC GCGC GGC GCGC TTCTTTGCCAAGGAG Daci_3764 4135814 - 4136833 + | TRAP dicarboxylate transporter, DctP subunit TERM 3246 4136927 - 4136914 - f 76 -5.9 -4.64844 | overlap 4136915 GCGACAGAGAGAAAA CGCGC ACCA GCGCA TCCGCAGGAACCCCG Daci_3765 4136944 - 4138770 + | phosphogluconate dehydratase Daci_3766 4138755 - 4139393 + | 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase TERM 3247 4139433 - 4139415 - f 84 -17.4 -2.71011 | opp_overlap 4139415 ATTGCCCCGGAACCA GCGGCCCC CAA GGGGCCGC TTTTGTTTGTCTGGG TERM 3248 4139415 - 4139433 + F 100 -17.4 -5.05113 | opp_overlap 4139415 ATTGCCCCGGAACCA GCGGCCCC CAA GGGGCCGC TTTTGTTTGTCTGGG TERM 3249 4139718 - 4139703 - f 80 -3.3 -5.14163 | ACCGACCAAGAAAAA TGCAA TTGCCG TTGCA GGGCCTGGAAATAAA TERM 3250 4139767 - 4139736 - f 100 -24.6 -5.27335 | opp_overlap 4139736 GCCTGGAAATAAAAA TTGGCACTGGCGCC TCGC GGCGCCAGTGCCAA TTTTTATTGGTCGAG TERM 3251 4139736 - 4139767 + F 100 -24.6 -5.1356 | opp_overlap 4139736 GCCTGGAAATAAAAA TTGGCACTGGCGCC TCGC GGCGCCAGTGCCAA TTTTTATTGGTCGAG TERM 3252 4139885 - 4139916 + F 100 -11.8 -5.81032 | opp_overlap 4139885 4139888 TATCATTTTCGAGAA TAATCCACGTCTTT TTTA GAAGATGTGGATTA TTTTTTTTCAAGTTC Daci_3767 4140009 - 4141643 + | methyl-accepting chemotaxis sensory transducer TERM 3253 4141723 - 4141675 - f 87 -16.8 -3.12351 | gap 1, opp_overlap 4141670 4141678 4141704 GTGCGTCACAGCCAA CGGGGAGCGGTTCTCCTGGCAGG CTTG CCTGCCAGGAGAACGG-TGCCTG TTCGCTGGAATTTTG TERM 3254 4141678 - 4141721 + F 100 -21.8 -3.10071 | opp_overlap 4141675, overlap 4141670 4141704 CGTCACAGCCAACGG GGAGCGGTTCTCCTGGCAGG CTTG CCTGCCAGGAGAACGGTGCC TGTTCGCTGGAATTT TERM 3255 4142654 - 4142641 - g 71 -2.4 -4.57569 | GGAGGTTTGGAAAAA CCAT CATGGC ATGG GCGGCCATCAGCCTG TERM 3256 4143082 - 4143055 - g 75 -8.4 -4.11394 | overlap 4143080 ATTCCATGGCGAAAA CGCTCTCCATCC GACT GGGTGAAAAGCG CTACATGCTGGGTGA TERM 3257 4143088 - 4143105 + G 72 -5.5 -4.41956 | opp_overlap 4143080, overlap 4143101 GTGAAAAGCGCTACA TGCTGGG TGAG CGCAGCA TTTTGCTGTCTGTCT Daci_3768 4141755 - 4144052 + | diguanylate cyclase/phosphodiesterase Daci_3769 4144123 - 4145022 + | LysR family transcriptional regulator TERM 3258 4145157 - 4145137 - g 72 -8.9 -4.06185 | overlap 4145138 GAGACAAACATGAAA CGCCGCGAC TTC ATCGCGGCC GGCGCCACCGCGCTG TERM 3259 4145809 - 4145792 - g 82 -6.3 -4.72272 | gap 1, overlap 4145793 4145794 TCCGCGCAGGAAAAA TGCTGGGC ATC GCCCAG-A CCCGCGTGAACCGTG Daci_3770 4145131 - 4146114 + | hypothetical protein Daci_3771 4146124 - 4147311 + | Formyl-CoA transferase Daci_3772 4147308 - 4148072 + | enoyl-CoA hydratase/isomerase Daci_3773 4149542 - 4148115 - | TonB family protein TERM 3260 4149141 - 4149180 + g 72 -4 -4.57837 | CTCGTTCAGCCAGAT GCTGACAGCAGTACGGTC TTGG GGCCACCCGGCTGCCAGC TTTTTGCGCAGGTCT Daci_3774 4151280 - 4149562 - | 2-alkenal reductase TERM 3261 4149748 - 4149766 + g 86 -12.4 -4.22652 | opp_overlap 4149738 ATAGACGCGCTCGGC CCGCGCCA GCG TGGTGCGG TTTTCGATGGTGTCG Daci_3775 4151579 - 4152406 + | Ricin B lectin Daci_3776 4152416 - 4153258 + | hypothetical protein Daci_3777 4153336 - 4153806 + | lactoylglutathione lyase Daci_3778 4155883 - 4153814 - | UvrD/REP helicase TERM 3262 4154204 - 4154188 - G 71 -2.2 -4.57569 | overlap 4154147 4154199 CCACGCCCGCAAAAA GGCC CCAGACATC GGCC TGCTCCAGCAGGCTG TERM 3263 4154593 - 4154630 + g 77 -14.9 -3.17051 | gap 1, opp_overlap 4154582, overlap 4154591 AGAAGCTGGCGGACT TGCCGGCGCGGTGG-ATG GCC CATTCCAGCGCGCAGGCA TCTTGCTCATGGCGC TERM 3264 4155875 - 4155855 - G 90 -12.5 -4.4078 | opp_overlap 4155864 CCGTGGCAATGAAAA CCGCCGTGG CGA CGACGGCGG GCACCCATTGTGGTC TERM 3265 4156046 - 4156081 + H 70 -4.6 -4.57073 | opp_overlap 4156045 4156066 4156069 4156074, overlap 4156048 4156074 ACTTCTGCCAAAACG CCGCGAACATCGCTCA AAAA TAAGCGAAGTTCGCTC TTTTTGCAGGCCATG TERM 3266 4156048 - 4156079 + H 82 -11.6 -3.90048 | opp_overlap 4156045 4156066 4156069 4156074, overlap 4156046 4156074 TTCTGCCAAAACGCC GCGAACATCGCTCA AAAA TAAGCGAAGTTCGC TCTTTTTGCAGGCCA TERM 3267 4156079 - 4156069 - H 74 -6.8 -4.40963 | opp_overlap 4156048 4156046 4156074, overlap 4156045 4156066 4156074 ATCGCTCAAAAATAA GCGA AGT TCGC TCTTTTTGCAGGCCA TERM 3268 4156573 - 4156583 + G 75 -8.2 -4.18018 | opp_overlap 4156543 4156568, overlap 4156568 CCGCCAAGGACGCGG GCGC CAC GCGC TTTTGCATGGGCGCG Daci_3779 4156197 - 4157258 + | biotin synthase Daci_3780 4158446 - 4157295 - | integrase family protein TERM 3269 4157912 - 4157931 + g 75 -4.8 -4.57569 | overlap 4157916 GCAATTGCTCCAGCA GGTCGCGC GTCA GCGCATCC TTTTTGGCCGGCTGC TERM 3270 4158066 - 4158050 - G 76 -13.7 -3.53224 | opp_overlap 4158057 4158061 GATGGGCCTTGGAAA GCACCGC CAT GCGGTGC ACCAGCGTGTTGTGC TERM 3271 4158566 - 4158576 + H 73 -4.6 -4.65895 | overlap 4158573 CCAAGCTTTCCAGAG GCTG CAG CGGC TTTTTGCCTGGGCAA Daci_3781 4158735 - 4159718 + | hypothetical protein Daci_3782 4160441 - 4159740 - | GntR family transcriptional regulator Daci_3783 4160727 - 4162328 + | gamma-glutamyltransferase TERM 3272 4162433 - 4162485 + T 74 -11.8 -3.55761 | CGGCCTGGTTCGCCT GGAGGATGCCTGGAAGCGTGCGCA GGATG TGGGCGCGCATCAGGGCCTCCACC TTTGCGCCATCCCTG Daci_3784 4163081 - 4162413 - | GntR family transcriptional regulator TERM 3273 4163612 - 4163574 - g 100 -18.9 -4.17048 | gap 1 GCTGGTGGAAAACAA GCCG-GGTGCCGCCGCCA TGAT CGGCAGCGACACCGCGGC CCGGGCCCCGGGCGA Daci_3785 4163254 - 4164342 + | hypothetical protein Daci_3786 4166243 - 4164411 - | methyl-accepting chemotaxis sensory transducer with Cache sensor TERM 3274 4164516 - 4164546 + g 76 -13.9 -3.4252 | overlap 4164492 4164536 4164537 CTGCAGCGACTGCGC CGCGGCCGTGGCC TCTTC GACCAGGGCCGCG TTCTGCTGGGTGGAC TERM 3275 4166013 - 4165974 - G 70 -12.8 -3.33492 | gap 1, overlap 4165962 GTAGGCATCCGAGAA GCCGC-CGCCGTCGCGCAG AGC CTGGACCACGGCACGCGGC TCCGGCGTATCGACC Daci_3787 4167716 - 4166379 - | 6-aminohexanoate-dimer hydrolase TERM 3276 4167774 - 4167753 - H 79 -13.1 -3.53563 | AGATCCGCTGCCAAA GGATGGAAG CCGG CTTCCATCC CAGGCCCTGCGCCCA Daci_3788 4167865 - 4168797 + | LysR family transcriptional regulator Daci_3789 4169623 - 4168802 - | cobalamin (vitamin B12) biosynthesis CbiX protein Daci_3790 4170359 - 4169571 - | ABC transporter related Daci_3791 4171441 - 4170356 - | transport system permease protein TERM 3277 4170643 - 4170593 - G 70 -8.9 -3.88291 | gap 1, overlap 4170635 4170638 GATCAGCCCCACAAA GCCGATGGCGCCGCTGACCGCCAC CATG GTGCCCGTCAGCAACGACA-CTGC CAGGAACAGTGCGCG TERM 3278 4170747 - 4170787 + g 80 -16.8 -3.15663 | opp_overlap 4170754 GTCTGCAGCCCCAGC CAGAGCATTCCCGCAGCC AGCAC GGCGGCGGGAATGCCCAG TTCCTCCCACTGCGT TERM 3279 4171040 - 4171004 - G 77 -11.4 -3.86015 | CAGCGCCCCCACAAA GGCCCCGGCCGTGAGG GCGTA CATGCCGGCCGAGGCC AGCGCACCGAAGGCC Daci_3792 4172480 - 4171428 - | periplasmic binding protein TERM 3280 4171560 - 4171548 - G 82 -6.2 -4.77036 | GGTCATCACGAAAAA CCGC TTTTC GCGG ATGGCATCGACGCCG Daci_3793 4174642 - 4172480 - | TonB-dependent siderophore receptor TERM 3281 4174733 - 4174707 - R 71 -8.7 -3.72893 | gap 1, overlap 4174668 CAGCGTGGGAGGAAA GGGCGCAGGACG TTGC CATCC-GCACCC CGCAGACAGTCAAGA TERM 3282 4174768 - 4174752 - R 100 -13.7 -4.70772 | overlap 4174765 AGACAGTCAAGAAAA CGCCTGC ACA GCAGGCG CGAAACGCAGCAGGC TERM 3283 4174827 - 4174802 - R 72 -11.2 -3.28712 | gap 1, opp_overlap 4174791, overlap 4174803 TCTCCGGGCTCACAA GCGGCGCAAGG ACATG CCTTGCGCC-C AGCGCCCCGTCTTCC Daci_3794 4175808 - 4175095 - | hypothetical protein Daci_3795 4176468 - 4175809 - | 2OG-Fe(II) oxygenase TERM 3284 4176188 - 4176166 - G 81 -12.6 -3.87815 | overlap 4176127 4176168 4176169 CGCCAGCCGGACAAA CACGGCCGGC ATG GCCGGCCAGG GCTGGCCGCTGAGTG TERM 3285 4176186 - 4176168 - G 76 -13.8 -3.52906 | overlap 4176127 4176166 4176169 CCAGCCGGACAAACA CGGCCGGC ATG GCCGGCCA GGGCTGGCCGCTGAG TERM 3286 4176185 - 4176169 - G 70 -15.1 -2.71422 | overlap 4176127 4176168 4176166 CAGCCGGACAAACAC GGCCGGC ATG GCCGGCC AGGGCTGGCCGCTGA Daci_3796 4177455 - 4176472 - | hypothetical protein Daci_3797 4177674 - 4178255 + | hypothetical protein TERM 3287 4178361 - 4178378 + F 75 -8.3 -4.25104 | overlap 4178363 CCCGGCAGGATGGAT CTGCGCC AGCA GGCGCTG TTTTCCTGAGCGGAG TERM 3288 4178363 - 4178376 + F 71 -9.5 -3.73042 | overlap 4178361 CGGCAGGATGGATCT GCGCC AGCA GGCGC TGTTTTCCTGAGCGG TERM 3289 4178689 - 4178716 + G 75 -8.2 -4.11751 | overlap 4178690 4178714 CCACGGAGTTTCCGC TGCAGGCCGCCG CCGC CGGCGCCCAGCC TTTTGCAGGCTTCAT TERM 3290 4178997 - 4179017 + G 78 -10.3 -4.21194 | opp_overlap 4178994 4178993, overlap 4178999 CTGCTGGAAAAGCGC CTGCTGGCC GGC GGCCGGCTG TTTTGCCTGGTCAGC TERM 3291 4178999 - 4179015 + G 74 -11.5 -3.70674 | opp_overlap 4178994 4178993, overlap 4178997 GCTGGAAAAGCGCCT GCTGGCC GGC GGCCGGC TGTTTTGCCTGGTCA TERM 3292 4179308 - 4179324 + G 72 -9.3 -4.07568 | ATTGCAGGCGCTGAC GGGCGGG CAT CCCGCGC TTTTCGAGGAAGCGC Daci_3798 4178403 - 4179653 + | hypothetical protein Daci_3799 4179650 - 4181848 + | hypothetical protein TERM 3293 4181856 - 4181889 + T 84 -10.4 -4.14874 | gap 1, opp_overlap 4181852 4181856 4181859, overlap 4181859 ACAGCTGAAAACGAA GC-AGGCAAGGCACT GGAGG AGTGCCTTGCCTTGG TTTTCAGGCTGTTAT TERM 3294 4181888 - 4181856 - T 73 -10.6 -3.68767 | opp_overlap 4181856 4181859, overlap 4181852 4181859 ACAGCTGAAAACGAA GCAGGCAAGGCACT GGAGG AGTGCCTTGCCTTG GTTTTCAGGCTGTTA TERM 3295 4181885 - 4181859 - T 85 -16.7 -2.94333 | opp_overlap 4181856 4181859, overlap 4181856 4181852 GCTGAAAACGAAGCA GGCAAGGCACT GGAGG AGTGCCTTGCC TTGGTTTTCAGGCTG TERM 3296 4181859 - 4181885 + T 100 -16.7 -3.67622 | opp_overlap 4181859 4181856 4181852, overlap 4181856 GCTGAAAACGAAGCA GGCAAGGCACT GGAGG AGTGCCTTGCC TTGGTTTTCAGGCTG Daci_3800 4183105 - 4182008 - | hypothetical protein Daci_3801 4183404 - 4184411 + | hypothetical protein Daci_3802 4184448 - 4185131 + | two component transcriptional regulator Daci_3803 4185109 - 4186527 + | histidine kinase TERM 3297 4186698 - 4186677 - g 89 -6.5 -5.10461 | gap 1, opp_overlap 4186686 4186688 GGGAGTCAACAAAAA TGCCGTGTGC ATC GCCC-CGGCA AAGCTGGGCGGCGGT TERM 3298 4187543 - 4187528 - g 75 -4.6 -4.54821 | ACCTGAAGCAGAAAA TCCAGG AGTA CCGGGA AGATGCCGAAAAAAT Daci_3804 4186540 - 4187589 + | hypothetical protein TERM 3299 4188324 - 4188297 - g 71 -11.2 -3.57462 | overlap 4188300 GACCGCATGGGCAAA CAAGTGGGCCGC TACT ACGGCCCCCCTG CAACCTGGGAGGCCA TERM 3300 4188321 - 4188300 - g 70 -9.3 -3.92542 | overlap 4188297 CGCATGGGCAAACAA GTGGGCCGC TACT ACGGCCCCC CTGCAACCTGGGAGG Daci_3806 4187934 - 4188587 + | hypothetical protein Daci_3807 4188653 - 4189231 + | ECF subfamily RNA polymerase sigma-24 factor Daci_3808 4189228 - 4189974 + | RNA polymerase sigma-70 family protein Daci_3809 4191253 - 4190075 - | porin TERM 3301 4190378 - 4190435 + g 85 -17.5 -3.22298 | gap 1, overlap 4190374 CGGCGTGGCGCCGTT GCTGGCCG-AGGCCGCCTGGGCCGCGTC GTT GTCGCGGCGCATGAGGCCGGCGCCCAGC TTGATGGTGGGTGAC TERM 3302 4191245 - 4191255 + g 72 -3.2 -4.61147 | overlap 4191233 4191228 AATGCTCTTGAGAGT GCGT TTC ATGC TTTTGTCTCCTGTTG Daci_3810 4191822 - 4191370 - | hypothetical protein TERM 3303 4191813 - 4191823 + g 72 -5.4 -4.38927 | GCAGCCGGTCGATTT CATG GTT CATG TTTCTTGTCTCCCCG Daci_3811 4191992 - 4193272 + | LysR family transcriptional regulator Daci_3812 4194010 - 4193291 - | alpha/beta hydrolase fold Daci_3813 4194879 - 4194007 - | protocatechuate 4,5-dioxygenase subunit beta Daci_3814 4195286 - 4194879 - | protocatechuate 4,5-dioxygenase subunit alpha Daci_3815 4196665 - 4195325 - | major facilitator transporter TERM 3304 4196699 - 4196727 + r 74 -7.4 -4.30995 | gap 2, overlap 4196697 AGGTTGTCTCTTTGC CCTGG-C-AGGCGC TTT GCGCCCAGGCCAGG TTCTTTTGTGGGGAA TERM 3305 4196904 - 4196879 - R 100 -18.3 -4.56597 | opp_overlap 4196879 GGCCGCGTGCAAAAA GGCCGGCCACC CAGA GGTGACCGGCC TTCTTTCATCAAGAA TERM 3306 4196879 - 4196904 + r 100 -16.1 -4.00042 | opp_overlap 4196879 GGCCGCGTGCAAAAA GGCCGGCCACC CAGA GGTGACCGGCC TTCTTTCATCAAGAA Daci_3816 4199211 - 4196959 - | aldehyde oxidase and xanthine dehydrogenase molybdopterin binding TERM 3307 4198269 - 4198286 + g 74 -11.3 -3.73224 | CCGCCGATCCACCGG GCTGGTC GCCC GACCAGC TTTCGTGGCCGATGG Daci_3817 4200166 - 4199216 - | molybdopterin dehydrogenase FAD-binding Daci_3818 4200924 - 4200163 - | 2Fe-2S iron-sulfur cluster binding domain-containing protein TERM 3308 4200297 - 4200321 + g 73 -7.9 -4.10552 | gap 1 GGGCCACGATGTCTT CGCTGGCATG GCTGGG CATGCC-GCG TTTGATTTCATCGAG Daci_3819 4206579 - 4201054 - | AAA ATPase TERM 3309 4202416 - 4202449 + g 71 -11.9 -3.64487 | gap 1 CAGGAACTCGGGGTG CGTG-TGCTGTATGTC GTC GATGTACAGCATCACG TTGTTGGCCATCTCC TERM 3310 4203291 - 4203274 - G 70 -4.1 -4.48987 | overlap 4203268 GCTGGAGAAGGAAAA GCGCA CGGCCTTT TGCGC CAGCTCGGCCTGCAG Daci_3820 4208851 - 4206776 - | band 7 protein TERM 3311 4207320 - 4207361 + g 72 -6.4 -4.30576 | gap 2, overlap 4207319 CCCTGCTTTTCGTTG GCGTC-GGCCGTGGC-CTCG ATGA CGCGCGCCTCGGCCAGGCCC TTTTCCTGATGGCCC TERM 3312 4207412 - 4207426 + g 71 -11.4 -3.66908 | opp_overlap 4207408, overlap 4207408 CTCGGCAATCACGCG GGCCTG GGC CAGGCC TTCCTTTTCCAGGGC TERM 3313 4208103 - 4208131 + g 84 -16.8 -3.43071 | gap 1 CGCGCCTCGGCATCG GCC-TGCTGGCGC TCCA GCGCCAGCATGGC TTCCTTGGTCTCCAC Daci_3821 4209618 - 4208950 - | ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 Daci_3822 4210403 - 4209693 - | phage shock protein A, PspA TERM 3314 4209822 - 4209870 + g 79 -8 -4.45544 | gap 2, overlap 4209821 4209826 ATCTTCGCTGCTGTC GCGCGCC-AGCTCGG-CCGCGCTT TCC ATGCGCGCACCGCGCTCGGCCTGC TTTTGCTTGATGCGC TERM 3315 4209924 - 4209967 + g 71 -11.6 -3.66874 | gap 1, opp_overlap 4209896 4209895 CACGCGCGTCTGCGA GCCTGCATAGCGGCC-GGCCA CCG TGGCCTGGGCGCGCTGCACGC TTTCCGTGGCCTTGA TERM 3316 4210221 - 4210233 + g 72 -4.7 -4.41494 | GGTCTGCTTGAGCTT GCCGG CCG CCAGC TTTTGCTTGGCCATG Daci_3823 4211113 - 4210445 - | hypothetical protein TERM 3317 4210603 - 4210660 + g 71 -2.6 -4.56597 | gap 2, opp_overlap 4210603, overlap 4210603 4210604 GGGCGGCGAACATCA C-GTAGCCCT-CGCCACCGTGGGCCTGG GGTT CCAGCGCCATCGTGGTGAAGGGAAACAG TTTTTGCAGGCGCAG TERM 3318 4213361 - 4213387 + G 72 -13.6 -3.24825 | opp_overlap 4213358, overlap 4213359 TGCGCTGGAACAGCC CGACGCGCGGCA TGG TGCCGCCCGGCG TCTTCATTCCGGTGG Daci_3824 4211368 - 4214001 + | diguanylate cyclase/phosphodiesterase TERM 3319 4215079 - 4215102 + G 73 -7.4 -4.13767 | opp_overlap 4215087, overlap 4215070 CTTTGATGGCGAGCG CGAATGGATG GCGC CGCCCATTCG TTTTCGCCTGGGCGA Daci_3825 4214159 - 4215166 + | diacylglycerol kinase catalytic region TERM 3320 4215559 - 4215536 - g 77 -18.2 -2.62184 | TTGGCGTGGACACCA CGCGCTGGTG GCGC CACCAGCGCG GCAGCCTGTCGGCCA TERM 3321 4215616 - 4215599 - g 74 -12.7 -3.53811 | opp_overlap 4215613 4215614 GGCAGGTGGCCCAAA GGCTGGC GCAG GCCAGCC CCGGCGACTGGCGCA Daci_3826 4215190 - 4216005 + | metallophosphoesterase Daci_3827 4216191 - 4216559 + | response regulator receiver protein Daci_3828 4217783 - 4216605 - | response regulator receiver sensor signal transduction histidine kinase Daci_3829 4218398 - 4217784 - | CheB methylesterase Daci_3830 4219237 - 4218398 - | MCP methyltransferase, CheR-type TERM 3322 4219205 - 4219219 + g 82 -3.4 -5.0538 | CAGGCGCTGCTCGAT GTCGGC GGT GCGGGC TTTTTTCAGCTGAGG Daci_3831 4222784 - 4219251 - | GAF sensor hybrid histidine kinase TERM 3323 4221743 - 4221759 + g 70 -12.3 -3.35679 | opp_overlap 4221729 AGCCCAGTTCGATGA CGGCGAA CAC TTCGCCG TTCTCCATGGCGGGC Daci_3832 4223002 - 4223391 + | hypothetical protein Daci_3833 4223498 - 4223905 + | hypothetical protein Daci_3834 4225739 - 4223952 - | methyl-accepting chemotaxis sensory transducer TERM 3324 4225705 - 4225731 + g 82 -4.2 -4.98616 | opp_overlap 4225694 4225695, overlap 4225695 4225694 AGAATGGTGAAGCCG CCTCCGAGACGG AGG CCGATGCGCAGG TTTTTCATGTTTTCC Daci_3835 4226617 - 4225781 - | hypothetical protein TERM 3325 4226819 - 4226802 - R 100 -12.7 -4.72272 | CCCGGCCATGAAAAA GGGCCTC AGAA GAGGCCC TCCAGCAACACATTG Daci_3836 4227779 - 4226841 - | GntR family transcriptional regulator TERM 3326 4228086 - 4228105 + r 100 -7.8 -5.24799 | CGAGCAAGTCGACTC CCCATGCC CGCA GCCATGGG TTTTTGTGTTTGTCA TERM 3327 4228309 - 4228288 - R 100 -14.5 -4.2349 | opp_overlap 4228286 TTTCCATACTGAAAA GCCTCCATC GATA GATGGAGGC CATATTCCCGCACGT TERM 3328 4228361 - 4228336 - R 89 -18.3 -3.05963 | ACGTCCACGGCAACA CCCGCGCCAGA CGCG TCCGGCGCGGG TTGCCGCAGCAGCGC Daci_3837 4228875 - 4228393 - | hypothetical protein TERM 3329 4229376 - 4229392 + H 71 -7.9 -4.05446 | opp_overlap 4229368 4229372 GCACAGAGACAGATT GCCGGTG TGA TGCCGGC TTTCTCCTTGACCAA Daci_3838 4229490 - 4231553 + | serine/threonine protein kinase Daci_3839 4231563 - 4232351 + | hypothetical protein Daci_3840 4232354 - 4232848 + | TPR repeat-containing protein TERM 3330 4233262 - 4233250 - g 72 -6.2 -4.27316 | overlap 4233251 GGCTGCAATGCAAAA CGCG CAGGC CGCG CAAGCAACGCAGGCA Daci_3841 4232891 - 4234936 + | FHA domain-containing protein Daci_3842 4234933 - 4235721 + | protein serine/threonine phosphatase Daci_3843 4235741 - 4236340 + | putative lipoprotein Daci_3844 4236358 - 4237692 + | type VI secretion protein Daci_3845 4237714 - 4239045 + | hypothetical protein TERM 3331 4240961 - 4240933 - g 86 -13.1 -4.11692 | overlap 4240936 CAGCGACTGGGAAAA CACCCTGCCCCAG CAT CTGGTGCAGGCTG GCCTGGTGGACCAGC Daci_3846 4239050 - 4242706 + | type VI secretion protein IcmF Daci_3847 4242688 - 4243392 + | hypothetical protein Daci_3848 4243450 - 4244487 + | ImpA family type VI secretion-associated protein Daci_3849 4244484 - 4244906 + | hypothetical protein Daci_3850 4245030 - 4245572 + | type VI secretion protein Daci_3851 4245601 - 4247094 + | EvpB family type VI secretion protein TERM 3332 4247134 - 4247097 - f 74 -12.5 -3.23853 | opp_overlap 4247094, overlap 4247095 GGGCGCGAAGTAAGA CGATGTCGCCGGCCGGC TGCG GCGGGTCGGCGTCAGCG GTACCTGATTACAGG Daci_3852 4247099 - 4247596 + | hypothetical protein TERM 3333 4247765 - 4247751 - g 72 -6.4 -4.30978 | opp_overlap 4247753 TTGAACGCACCAAAA TACCAG ACT CCGGTA TTCAAAATTCGGGAT Daci_3853 4247670 - 4248578 + | hypothetical protein Daci_3854 4248655 - 4249026 + | putative cytoplasmic protein Daci_3855 4249035 - 4249595 + | hypothetical protein TERM 3334 4249925 - 4249910 - g 84 -4.6 -5.06414 | CGCCGGCAAGAAAAA GCCCTT TCTC ATGGGC GAGCCCGCGCAATGG TERM 3335 4250006 - 4249974 - g 77 -14.7 -3.16564 | GCCCTAGCCCATGAA GGAGCGGCCGCCCAG GAC CTGCGCGCCCGCGCC CTGGACGAGGCGCCC Daci_3856 4249644 - 4250453 + | virulence protein SciE type Daci_3857 4250465 - 4250911 + | hypothetical protein Daci_3858 4250923 - 4251477 + | type VI secretion system lysozyme-related protein Daci_3859 4251501 - 4253375 + | type VI secretion protein Daci_3860 4253462 - 4254562 + | type VI secretion protein Daci_3861 4254603 - 4255436 + | hypothetical protein Daci_3862 4255472 - 4256077 + | hypothetical protein Daci_3863 4256082 - 4256645 + | hypothetical protein Daci_3864 4256651 - 4259437 + | type VI secretion ATPase TERM 3336 4259424 - 4259447 + F 80 -15.2 -3.01712 | TGCGCACCCGCGCTG CGGAGCCCGC ATGA GCGGGCGCCG TCTTCCACGCGCCAC TERM 3337 4259974 - 4260004 + G 91 -21.8 -3.05343 | GACCTGTCCACCGGC CGCGCGCGCCCCGG TGG CCGGGGCGTGCGCA TCTTCGCCCTGTCCG TERM 3338 4260423 - 4260444 + G 74 -11.5 -3.72576 | overlap 4260424 CATTGCCGAGCGCCA CCCGCTGGC CGCT GCCAGCGGC TTTGATGCCGGCAAG TERM 3339 4260424 - 4260443 + G 72 -15 -2.83403 | overlap 4260423 ATTGCCGAGCGCCAC CCGCTGGC CGCT GCCAGCGG CTTTGATGCCGGCAA Daci_3865 4259434 - 4261725 + | peptidase S41 TERM 3340 4262216 - 4262195 - g 100 -2.1 -5.75342 | TGTTTCGAAAAAAAA TGCGGCAGG AAAG CTCGCTGCA ACAATTCCGCACTCC Daci_3866 4261762 - 4262721 + | hypothetical protein Daci_3867 4262724 - 4263881 + | hypothetical protein TERM 3341 4264450 - 4264426 - g 73 -12.9 -3.40403 | CTGCGTGCAGTACAA CGAGACGGACT TCC AGTTCGTCTCG CGCCTCATGGAGCAC TERM 3342 4264990 - 4264969 - g 78 -6.5 -4.63218 | gap 1, overlap 4264970 CGCCTTCGAAGAAAA CCCGCGCGTC AGC GACG-GCGGC AGCGGCGAGGGCTCG Daci_3868 4263992 - 4266184 + | type VI secretion system Vgr family protein Daci_3869 4266195 - 4267511 + | hypothetical protein Daci_3870 4267504 - 4267863 + | hypothetical protein TERM 3343 4267909 - 4267891 - g 79 -3 -4.9041 | overlap 4267892 ACCAGAAAAAAACAA CTGCCTGC AGC GCAGTCAC AAACTGCACAGGTCA TERM 3344 4268059 - 4268048 - g 89 -5.8 -5.14563 | opp_overlap 4268056 4268058 TCGCCCAGGAAAAAA GCTG GTGG CAGC GCTGGGGCAGCGACG TERM 3345 4268580 - 4268566 - g 83 -5 -4.86773 | GAAAAGCAGCAAAAA TCAGTT CTC AACCGA GTCTACAATAATGCG Daci_3871 4267870 - 4268868 + | hypothetical protein Daci_3872 4268875 - 4269345 + | hypothetical protein TERM 3346 4269603 - 4269624 + G 77 -4.3 -4.77165 | opp_overlap 4269604, overlap 4269604 GAATCTTCAAAGATA ACTCCATCC ATAT GGACGGAGA TTTTATTCTCAAACA TERM 3347 4269623 - 4269604 - g 73 -10 -3.82603 | opp_overlap 4269603 4269604 AATCTTCAAAGATAA CTCCATCC ATAT GGACGGAG ATTTTATTCTCAAAC TERM 3348 4269765 - 4269743 - g 83 -4.9 -4.82667 | gap 1, opp_overlap 4269743, overlap 4269747 TTAGTACATCAAAAA CTAG-GGCAA CCCA TTGCCTCCAG GTTTATTCATAACCT Daci_3873 4269359 - 4270423 + | hypothetical protein Daci_3874 4270598 - 4271143 + | YD repeat-containing protein Daci_3875 4271477 - 4271238 - | hypothetical protein TERM 3349 4271367 - 4271357 - G 79 -5.4 -4.74801 | overlap 4271364 CAAGGCTATGAAAAA CAAG GAT CTTG AATGCAAGGATGCCT Daci_3876 4271618 - 4271944 + | hypothetical protein TERM 3350 4272391 - 4272368 - g 86 -3.4 -5.1764 | gap 1, opp_overlap 4272357 4272371, overlap 4272373 CAGATAATATAAAAA TATTATTCAAT TTT ATTGAA-AATA GATTAACCAATGATT Daci_3877 4272088 - 4272555 + | hypothetical protein Daci_3878 4272556 - 4273113 + | hypothetical protein TERM 3351 4273466 - 4273456 - g 100 -2.4 -5.93809 | opp_overlap 4273460 CCTTGACAAAAAAAA CTCC GAT GGCG CACTCATCATTAATG Daci_3879 4273124 - 4273702 + | hypothetical protein Daci_3880 4273744 - 4274181 + | hypothetical protein Daci_3881 4274932 - 4275645 + | hypothetical protein Daci_3882 4276351 - 4275686 - | binding-protein-dependent transport systems inner membrane component Daci_3883 4277127 - 4276387 - | molybdenum ABC transporter, periplasmic molybdate-binding protein TERM 3352 4277271 - 4277247 - R 100 -15.8 -5.24531 | AGCGCCCATAAAAAA GCCTCCATGC ATGAG GCATGGAGGC CGGCAGGCATGGCTG Daci_3884 4278050 - 4277322 - | hypothetical protein TERM 3353 4278110 - 4278078 - R 100 -9.2 -6.04378 | overlap 4278080 AAAGGACAAAAAAAA CA-GCCATCGGCGCCA CAA CGG-GCCGACGGCATG AACGTGCTTGGGGAG TERM 3354 4278107 - 4278080 - R 95 -12 -4.6341 | gap 1, overlap 4278078 AGGACAAAAAAAACA GCCATCGGCGCCA CAA CGG-GCCGACGGC ATGAACGTGCTTGGG Daci_3885 4280162 - 4278246 - | AMP-dependent synthetase and ligase Daci_3886 4281222 - 4280167 - | hypothetical protein TERM 3355 4280911 - 4280941 + g 70 -8.9 -3.92996 | gap 1, overlap 4280905 AGCCGTGCGGAACTG GCCCGCCGCCACCG CGCC CGATG-CGCCGGGC TTGTTCTCTATCACC Daci_3887 4281307 - 4282257 + | LysR family transcriptional regulator Daci_3888 4282313 - 4282894 + | TetR family transcriptional regulator TERM 3356 4282879 - 4282911 + F 100 -10.4 -5.33026 | opp_overlap 4282879 CCTTGTGTCCACGAA GCGGCTGCTGGGCT GAGCA GGCCGGGCCGCCGC TTTTTATTTGCCTTG Daci_3889 4283009 - 4284109 + | NADH:flavin oxidoreductase/NADH oxidase Daci_3890 4284190 - 4284822 + | hypothetical protein Daci_3891 4284860 - 4285444 + | flavin reductase domain-containing protein Daci_3892 4285462 - 4286316 + | zinc metalloproteinase Mpr protein Daci_3893 4286880 - 4286383 - | OsmC family protein Daci_3894 4287356 - 4286979 - | hypothetical protein TERM 3357 4287157 - 4287188 + g 77 -3.6 -4.72986 | GGGCCACCCTTGTAG GGCTTCGCATTTTC ACCG GCGAACGCCAAGCC TTTTTCATAGGCCTC Daci_3895 4288890 - 4287439 - | major facilitator transporter TERM 3358 4288394 - 4288383 - G 78 -5.8 -4.60924 | overlap 4288372 4288384 CAAACGCCGCAAAAA TGCG CCGC CGCA GTGCCTCGGGATACC TERM 3359 4288953 - 4288939 - R 74 -12.8 -3.25823 | TGCGGTTGAGATCAA GGGGGC CCT GCCCCC AAGTACCTCTTACCG Daci_3896 4290261 - 4288963 - | hypothetical protein Daci_3897 4292702 - 4290258 - | hypothetical protein TERM 3360 4291828 - 4291777 - G 79 -10.7 -4.07568 | gap 2 TCCCGGTCGGCAAAA GCCTGCGCGAC-GCTGCCCAC-GGC ACCT GCCAGCTCGCCGCTGGCGCGCAGGC TGCGCAGGTGGGCCT TERM 3361 4292413 - 4292384 - G 81 -12.1 -3.90744 | TGCCTTCGGAAACAA TGCGGCGGGCAAC CACC GTCAGCCGCCGCA CCGCACCGTCAAGCC Daci_3898 4294006 - 4292768 - | hypothetical protein TERM 3362 4294098 - 4294082 - H 79 -8.7 -4.15044 | GCGGCGTTGAAGAAA TGACCGC ACT GCAGTCA TCGCCCGCCCTGCTT TERM 3363 4294726 - 4294740 + G 71 -11.4 -3.55444 | overlap 4294725 TGCCCCTCATCTGCT TGGCCG GCG CGGCCA TTTCCGCCGTGCGCA Daci_3899 4294494 - 4295435 + | restriction endonuclease Daci_3900 4295821 - 4296624 + | hypothetical protein TERM 3364 4296849 - 4296827 - T 91 -14.2 -3.96224 | CAAACCACCCAGAAA GGCCACGCAT ATC ATGCATGGCC TCCCAGCACAGCACC Daci_3901 4297773 - 4297375 - | hypothetical protein TERM 3365 4297999 - 4298015 + H 73 -9.4 -3.86015 | overlap 4298012 CCGGGGCAAATGGCA GCCCTG ACTGG CAGGGC TTTATCACCGCCCTC Daci_3902 4298346 - 4299278 + | hypothetical protein Daci_3903 4299272 - 4299781 + | hypothetical protein TERM 3366 4300011 - 4300001 - g 72 -3.2 -4.53439 | CGAAATGGAAACAAA CAAC CTA GTCG ATGTCAGAAAATCAT TERM 3367 4300034 - 4300052 + G 79 -2.5 -4.86613 | overlap 4300036 AAAATCATTGATATA TGGAATT CCATC AATTCTA TTTGTTTTGGTTTTC TERM 3368 4300226 - 4300215 - g 81 -2.2 -4.96848 | overlap 4300220 TCGGTGATACAAAAA GCAA TCCC CTGC AGAGCAGGCACTCAA Daci_3904 4299930 - 4300499 + | hypothetical protein Daci_3905 4301106 - 4300918 - | hypothetical protein Daci_3906 4301126 - 4301314 + | hypothetical protein Daci_3907 4301652 - 4301936 + | hypothetical protein Daci_3908 4303477 - 4301978 - | hypothetical protein TERM 3369 4303618 - 4303654 + r 81 -13.6 -3.32844 | GAGCATTGGCTGGTA CTGGGCGCCGGCCTGC TGGGC GTGGGCTGGGGCCCGG TTATGGACTAGCGCG Daci_3909 4304772 - 4303738 - | LacI family transcription regulator Daci_3910 4304942 - 4305940 + | hypothetical protein Daci_3911 4305937 - 4306818 + | 2-dehydro-3-deoxyglucarate aldolase Daci_3912 4306815 - 4308542 + | dihydroxy-acid dehydratase TERM 3370 4308922 - 4308964 + F 71 -5.3 -4.42386 | overlap 4308924 TGGCCTCGGAAGCGG CAGGAGCTCTTCGGCTGCG CCAGT CGCAAGCGGTGAGCGCCGG TTTTGTGGATGGAGA TERM 3371 4310154 - 4310141 - g 72 -3.7 -4.65838 | overlap 4310132 CATACAGCGCAAAAA CGCGC TGGT GGGCG TGGACGGCAGCCTGG Daci_3913 4309299 - 4311068 + | YidE/YbjL domain-containing protein Daci_3914 4311133 - 4312728 + | aspartate aminotransferase Daci_3915 4313720 - 4312770 - | hypothetical protein TERM 3372 4313003 - 4312952 - G 81 -7.3 -4.57569 | gap 3, overlap 4312955 CCATGCCTGCAAAAA GGATGGCGTAGGCCAGGCCG-GTGTG CAG CACGCCCAGCCCGGCC-A-GCCACGC CCAGGACGACGGCGC Daci_3916 4313796 - 4314698 + | LysR family transcriptional regulator Daci_3917 4316098 - 4314728 - | hypothetical protein TERM 3373 4315767 - 4315809 + g 82 -14.1 -3.72576 | gap 1, opp_overlap 4315755 AAGCGCTGGCCCGAG CCGTCGTGC-ACCCAGCGGC GCTG GCCGCTGGCACGCACCACGG TTTCATGCGGGCCGG Daci_3918 4319211 - 4316095 - | CzcA family heavy metal efflux protein TERM 3374 4316595 - 4316620 + g 70 -12.5 -3.31144 | GCGGCACCACCAGCG CCAGCCGTGCG GCGG CGCGCTGCTGG TTCTCGAACTGGCCG TERM 3375 4316742 - 4316758 + g 76 -7.9 -4.30576 | overlap 4316713 CGTTGACCTGCACCA CGGCGAA GCG TGCGCCG TTTTCGTGGTCCACG TERM 3376 4317611 - 4317555 - G 79 -19.4 -2.65815 | gap 2 CGGACAGGTAGAGCA CGGCCGCCCCGGCCAGCGATGCCCCGGC AAT GCCGAAG-ACCGCAGGCCGGTG-GGCCA GGCTCCAGCGCTGCA Daci_3919 4320332 - 4319211 - | RND family efflux transporter MFP subunit TERM 3377 4320364 - 4320352 - R 84 -5.5 -5.0133 | overlap 4320355 4320358 GACTCCGGGAAAAAA GACGA ACG CCGTC CACGCGCAGGCGGTT TERM 3378 4320397 - 4320358 - R 73 -9.8 -3.66995 | gap 1, overlap 4320352 4320355 GGGAAAAAAGACGAA CGCCGTCCACGCGCAGGCG GTT CGCG-GCGCGCGGGCGAAG AAGGACTGAGGCGGG Daci_3920 4320851 - 4320435 - | hypothetical protein TERM 3379 4320991 - 4320963 - H 73 -8.8 -3.88498 | gap 1 CTGTCACATACCAAA GCAAGCCC-CCGC CATC GCGGCAGGCCCGC AAGCCGCACCAGGCC TERM 3380 4321089 - 4321109 + H 73 -13.9 -2.78384 | CTTCGCCCCCTCGGA GCCCGCCGG AGT CCGCCGGGC TGTGCTGGAGAACCG TERM 3381 4321615 - 4321592 - g 77 -4.4 -4.77036 | gap 1, overlap 4321593 4321594 TTCGAGCAGGAAAAA CTGCGCC-GCG ACC CGCTGGCCCCG GCCGACGATATCCGA Daci_3921 4321127 - 4322029 + | nitroreductase TERM 3382 4323064 - 4323081 + G 73 -9.9 -3.89346 | CTGCCGCCTGCGCCG CAGCACA AGGA TGTGCTG TTTCTGACCTGACCC Daci_3922 4322182 - 4323093 + | hypothetical protein Daci_3923 4323165 - 4323374 + | hypothetical protein Daci_3924 4324372 - 4323392 - | alpha/beta hydrolase domain-containing protein TERM 3383 4323787 - 4323836 + g 78 -9.1 -4.25104 | gap 1, opp_overlap 4323790, overlap 4323792 4323793 CCAGTGCCGGGTACA GCAGCAGCTGGTGGGCGATGGCCG GTG CGTCCGCCGCTCCCCAGCC-TTGC TTTTCCTGCGCCAGC TERM 3384 4323792 - 4323832 + g 74 -10.9 -3.71672 | opp_overlap 4323790, overlap 4323787 4323793 GCCGGGTACAGCAGC AGCTGGTGGGCGATGGCCG GTG CGTCCGCCGCTCCCCAGCC TTGCTTTTCCTGCGC TERM 3385 4324138 - 4324086 - G 74 -14.8 -3.06501 | gap 2, opp_overlap 4324086 TAGACCTCCAGCGAA CCCAGGCACCAGCCGCCGCCGTGGGC GAA GACCAGGGCGG-G-CTGGGGCGTGGG TGTGTCCGAGGCCAG TERM 3386 4324086 - 4324138 + g 72 -14.8 -2.87132 | gap 2, opp_overlap 4324086 TAGACCTCCAGCGAA CCCAGGCACCAGCCGCCGCCGTGGGC GAA GACCAGGGCGG-G-CTGGGGCGTGGG TGTGTCCGAGGCCAG TERM 3387 4324262 - 4324316 + g 77 -17.8 -2.54896 | gap 1 GGCGCGCAGCCCGGC GTCGGTGGCCTCGCGCAGCGCTGCC AGCGTG GGCGGCG-TGGGCGGGGCCACGGCC TGGGTTGCCTGCGCC Daci_3925 4325271 - 4324375 - | alpha/beta hydrolase fold Daci_3926 4326366 - 4325311 - | xylose isomerase domain-containing protein TERM 3388 4326880 - 4326862 - g 72 -6.6 -4.25104 | overlap 4326865 TTGCGCCGAGGAAAA CGAGGCAG TCG CCGCCTGG CTGGCCGAACACCGC TERM 3389 4327096 - 4327152 + G 85 -11.5 -4.31329 | gap 2, opp_overlap 4327072 GCTGCTGGACACGGC GCT-GGAGCC-GGCGCTGCAGCCCGCT GCCAA GGCGGGCTGAGCCGTCAGGCGCCGAGC TTTTGCAGTTTTTGC Daci_3927 4326509 - 4327135 + | TetR family transcriptional regulator Daci_3928 4328240 - 4327140 - | acyl-CoA dehydrogenase, putative TERM 3390 4327585 - 4327539 - G 72 -14.3 -3.15544 | gap 1, overlap 4327563 TTGCATGCCCAGGAA GGCCGGCCGCACACGC-GGCAG GAAT CCGCCGGCGCGCTCGGCCAGCA AATCGCCTTCGGTGA TERM 3391 4327768 - 4327758 - G 70 -8.2 -3.86194 | overlap 4327759 AATGGCGGCCAGAAA GCGG GGG CCGC GCAGGTTGGTGCACC TERM 3392 4328288 - 4328263 - R 100 -19.1 -5.67063 | opp_overlap 4328267 GTCACCATAAAAAAA GGGACCGCTGT GGGC ACAGCGGTCCC TTGCCATCCTAGCGC Daci_3929 4329669 - 4328338 - | gluconate 2-dehydrogenase (acceptor) TERM 3393 4328985 - 4329010 + g 89 -8.1 -4.82901 | opp_overlap 4328986, overlap 4328986 4329000 CCCAGCCGTCGATGA AGGCGCCGGCC AGGT GGTCGGCACCC TTTTTCTCGGCGCCG TERM 3394 4329374 - 4329401 + g 78 -17 -2.77701 | overlap 4329373 4329370 4329368 GCCTCGTACGACCAG CGGCCGATGCCG GTTT CGGCATCGGGCG TGATGTTGGTCGAGT TERM 3395 4329711 - 4329726 + r 76 -10.4 -3.76952 | overlap 4329705 TGCCTTGTCGGCCGG GGCTGC ATCG GCAGCC TTTGCCTTGAGTGCG Daci_3930 4331987 - 4329687 - | aldehyde oxidase and xanthine dehydrogenase molybdopterin binding TERM 3396 4331843 - 4331884 + g 73 -12.1 -3.53012 | overlap 4331846 CCCGGTCGATCGGGG GAATGGGGAAGGCGCCGGC CACG GCGGGCGCCGTACCCGTGC TTTCAGCCACCAGGC Daci_3931 4332571 - 4331984 - | 2Fe-2S iron-sulfur cluster binding domain-containing protein TERM 3397 4332666 - 4332691 + r 79 -9.7 -4.18697 | gap 1, opp_overlap 4332668, overlap 4332655 4332668 CAAGCCCGAAAAAGA AAGCCCACCGCC AGC GG-GGTGGGCTG TTTTCACGTGGTTTT TERM 3398 4332668 - 4332689 + r 82 -12.3 -3.68036 | gap 1, opp_overlap 4332668, overlap 4332666 4332655 AGCCCGAAAAAGAAA GCCCACCGCC AGC GG-GGTGGGC TGTTTTCACGTGGTT TERM 3399 4332689 - 4332668 - R 100 -12.3 -4.86385 | gap 1, opp_overlap 4332668 4332666 4332655 AGCCCGAAAAAGAAA GCCCACCGCC AGC GG-GGTGGGC TGTTTTCACGTGGTT Daci_3932 4333003 - 4332752 - | hypothetical protein Daci_3933 4333555 - 4333199 - | hypothetical protein Daci_3934 4333991 - 4334266 + | histone family protein nucleoid-structuring protein H-NS TERM 3400 4334330 - 4334279 - f 100 -17.4 -3.87869 | opp_overlap 4334287 4334295, overlap 4334293 TGAAGCCTGGATAAA CGCCTCCATGAAAACAGCCTGCAG TTCT CTGCAGGCTTTTTTCATTCTGGCG GCACTTGCTGCCACA TERM 3401 4334287 - 4334322 + F 95 -17.8 -3.29461 | opp_overlap 4334279 4334293, overlap 4334295 GGATAAACGCCTCCA TGAAAACAGCCTGCAG TTCT CTGCAGGCTTTTTTCA TTCTGGCGGCACTTG TERM 3402 4334316 - 4334293 - f 89 -11 -4.25283 | opp_overlap 4334287 4334295, overlap 4334279 ACGCCTCCATGAAAA CAGCCTGCAG TTCT CTGCAGGCTT TTTTCATTCTGGCGG TERM 3403 4334295 - 4334314 + F 100 -13.6 -5.32944 | opp_overlap 4334293 4334279, overlap 4334287 GCCTCCATGAAAACA GCCTGCAG TTCT CTGCAGGC TTTTTTCATTCTGGC TERM 3404 4334850 - 4334837 - g 72 -5.9 -4.3534 | overlap 4334838 TCCCAAGGATGAAAA CCGCC TGGT GGCAG GAGCTGCAAGCATCA Daci_3935 4334499 - 4335314 + | Hpt domain-containing protein Daci_3936 4336021 - 4335326 - | two component LuxR family transcriptional regulator TERM 3405 4335529 - 4335541 + g 70 -3.3 -4.4078 | overlap 4335530 ATTCCTTGGGACTGA GCACC CCC GGTGA TTTTCCTTCGCCGCC Daci_3937 4339015 - 4336085 - | Hpt sensor hybrid histidine kinase TERM 3406 4337507 - 4337522 + g 72 -4.7 -4.46233 | overlap 4337498 TTCTTCTGCCGCCTT TCTGG CATCTT CCAGA TTTCTTTGCACTTGC TERM 3407 4337852 - 4337900 + g 71 -9.8 -3.70902 | gap 2, opp_overlap 4337847 4337860, overlap 4337852 TCCATAAGGAGCCAT GG-CAATGATG-GTTCGACTCAGA TGC TCCGAGTCGAATACATCCTTGGCC TTTCCATATACCGGA TERM 3408 4337966 - 4337949 - G 89 -2 -5.28755 | overlap 4337962 AAATATATCAAAAAA CACCAT ATAAGA ATGATG AATATCAATGAAAGC TERM 3409 4338051 - 4338016 - G 100 -12.7 -5.47218 | opp_overlap 4338016 4338014 4338017, overlap 4338017 TCCCATTCAAAAAAA CGGCATCTCTCCAGG AGAAAA CCTGGAGAAATACCA TGTTTGTATTCGATA TERM 3410 4338050 - 4338017 - G 86 -14 -3.87608 | opp_overlap 4338017 4338016 4338014, overlap 4338016 CCCATTCAAAAAAAC GGCATCTCTCCAGG AGAAAA CCTGGAGAAATACC ATGTTTGTATTCGAT Daci_3938 4339804 - 4339148 - | two component LuxR family transcriptional regulator TERM 3411 4339333 - 4339315 - G 75 -6 -4.39166 | TGCCAGAGATGAAAA GAAGCAGA ACC TCTTCTTC CCGTTTTGAGAGCTC Daci_3939 4340111 - 4340587 + | lactoylglutathione lyase TERM 3412 4340606 - 4340642 + T 100 -21 -4.64657 | opp_overlap 4340606 4340611, overlap 4340611 ACGCAGCCATCAAAA CAAAAGGCCCGGAGCG ATTGA CGCTCCGGGCCTTTTC TTTTTGGCCGTTTAC TERM 3413 4340642 - 4340606 - T 100 -21 -4.28548 | opp_overlap 4340606 4340611, overlap 4340611 ACGCAGCCATCAAAA CAAAAGGCCCGGAGCG ATTGA CGCTCCGGGCCTTTTC TTTTTGGCCGTTTAC TERM 3414 4340611 - 4340637 + T 100 -20.9 -5.26119 | opp_overlap 4340611 4340606, overlap 4340606 GCCATCAAAACAAAA GGCCCGGAGCG ATTGA CGCTCCGGGCC TTTTCTTTTTGGCCG TERM 3415 4340637 - 4340611 - T 100 -20.9 -5.13722 | opp_overlap 4340606 4340611, overlap 4340606 GCCATCAAAACAAAA GGCCCGGAGCG ATTGA CGCTCCGGGCC TTTTCTTTTTGGCCG Daci_3940 4341199 - 4340675 - | OmpA/MotB domain-containing protein TERM 3416 4341766 - 4341756 - g 82 -6.8 -4.7373 | CGACGTCATGAAAAA GCTG TGG CAGC GCGAGATGGCCAATG Daci_3941 4341439 - 4342065 + | ChaC family protein Daci_3942 4342201 - 4342839 + | superoxide dismutase copper/zinc binding Daci_3943 4343423 - 4342851 - | hypothetical protein TERM 3417 4343267 - 4343290 + g 70 -14.6 -2.78384 | gap 1 GGTGCCAGGGCAGAC CGCTGGCGCGC ACG GCG-GCCAGCG TGTGATCGAGCACCG TERM 3418 4343563 - 4343537 - g 73 -15.9 -2.52543 | opp_overlap 4343531 4343530, overlap 4343542 AGCGCGCGGAACTGA GCGAATCGGCC TCCCT GGCCGATCCGC TGCAGCAGTTTGACC Daci_3944 4343476 - 4344123 + | pyridoxamine 5'-phosphate oxidase Daci_3945 4345264 - 4344161 - | auxin efflux carrier TERM 3419 4344403 - 4344431 + g 82 -15.9 -3.29461 | GCACCAGGTTCTTGA CCAGCGCGATGCC CAC GGCCTCGCGCAGG TTCTGGCCCACCTTG TERM 3420 4345377 - 4345351 - g 91 -9.4 -5.03314 | CCCATGTGCAAAAAA TGGCTGGCGC TAACGCT GCGGCAGCCA CGATTCCCAAGGAGA Daci_3946 4345350 - 4346267 + | pirin domain-containing protein TERM 3421 4346272 - 4346302 + F 95 -18.3 -3.3334 | opp_overlap 4346294, overlap 4346273 TGGCAGCTTGACCGC TGCGGCCCCTGTC CTGAA GACAGGGGCCGCC TTCTGCCCTCCCCTT TERM 3422 4346273 - 4346301 + F 100 -21.8 -2.59683 | opp_overlap 4346294, overlap 4346272 GGCAGCTTGACCGCT GCGGCCCCTGTC CTGAA GACAGGGGCCGC CTTCTGCCCTCCCCT Daci_3947 4346550 - 4347611 + | integrase family protein Daci_3948 4349838 - 4347646 - | TonB-dependent receptor TERM 3423 4349927 - 4349906 - R 81 -5.1 -5.00616 | gap 1 GGGCGCTGCAAAAAA TGGC-GTCGG AAG CGGACGGCCA CGGCGCGCCCTGCAG Daci_3949 4350534 - 4350079 - | hypothetical protein Daci_3950 4350965 - 4350657 - | hypothetical protein Daci_3951 4351514 - 4351017 - | ferric uptake regulator family protein Daci_3952 4352165 - 4351629 - | peptide methionine sulfoxide reductase TERM 3424 4352221 - 4352197 - H 84 -4.1 -5.25805 | overlap 4352198 4352200 AAGAAATCGAAAAAA TGACCACACGC AAT GCATGCGGGCC GTTGCACCTACAGGT Daci_3953 4352312 - 4353010 + | TetR family transcriptional regulator Daci_3954 4353007 - 4354248 + | RND family efflux transporter MFP subunit TERM 3425 4355360 - 4355384 + G 93 -7.1 -5.17744 | overlap 4355362 GATCACGGGGCTGAC GCTGCCGATTG CGC TGATCGGCACC TTTTTGTTCATGTAT Daci_3955 4354251 - 4357478 + | acriflavin resistance protein Daci_3956 4357522 - 4358232 + | protein-L-isoaspartate(D-aspartate) O-methyltransferase Daci_3957 4358310 - 4358657 + | rhodanese domain-containing protein TERM 3426 4358716 - 4358674 - f 100 -15 -4.28254 | opp_overlap 4358677 4358679, overlap 4358678 4358679 CGGCAACACGCAAAA GAAAC-CCGGGACACGGCGG TACAC CCGCCGT-CCCCGGTGCTTC GTGACGACTGTGTTT TERM 3427 4358711 - 4358678 - f 100 -12.4 -4.71418 | gap 1, opp_overlap 4358677 4358679, overlap 4358674 4358679 AACACGCAAAAGAAA CCCGGGACACGGCGG TACAC CCGCCGT-CCCCGGT GCTTCGTGACGACTG TERM 3428 4358679 - 4358710 + F 73 -13.7 -2.78018 | gap 1, opp_overlap 4358678 4358674 4358679, overlap 4358677 ACACGCAAAAGAAAC CCGGGACACGGCGG TACAC CCGCCGTC-CCCGG TGCTTCGTGACGACT TERM 3429 4358710 - 4358679 - f 89 -15.9 -3.41224 | gap 1, opp_overlap 4358679 4358677, overlap 4358678 4358674 ACACGCAAAAGAAAC CCGGGACACGGCGG TACAC CCGCCGT-CCCCGG TGCTTCGTGACGACT TERM 3430 4359689 - 4359678 - g 79 -7.2 -4.39696 | overlap 4359679 4359680 CTGGAAACGAAGAAA GCCG AGGC CGGC CACAAGCCCACCGTG Daci_3958 4358748 - 4360223 + | TolC family type I secretion outer membrane protein TERM 3431 4360292 - 4360234 - f 82 -12.1 -3.57561 | gap 1, opp_overlap 4360258, overlap 4360235 CTTGAATCCCTGAAA CGCCCGCACGGCCGGCAGTGCCCCGGGC TGAT GCCCGGC-CGCCGCGGGCCGCGCGCCTG GCGCCGCAGCCCTGT TERM 3432 4360258 - 4360304 + F 70 -12.9 -2.85351 | opp_overlap 4360235 4360234 GGCCGGCAGTGCCCC GGGCTGATGC-CCGGCCGCCGCG GGC CGC-GCGCCTGGCGCCGCAGCCC TGTGCTCTGGCAAAG Daci_3959 4360594 - 4361271 + | two component transcriptional regulator TERM 3433 4361350 - 4361303 - g 74 -15.5 -3.04144 | gap 1 CCTGCAGGGGCAACA GGCCAGCCCGAGATGGCGCCGC TGGCT GCGGC-CCACCCTGGGCCGGCG GATGCTGCTGGCCCA Daci_3960 4361274 - 4362695 + | histidine kinase Daci_3961 4362787 - 4363047 + | prevent-host-death family protein Daci_3962 4363059 - 4363472 + | PilT domain-containing protein TERM 3434 4363475 - 4363486 + T 71 -7.2 -4.2558 | GCCCTTTCGCTGAAC GGGC AAAA GCCC TTTTACTGCGCAGTC Daci_3963 4364849 - 4363530 - | 3-deoxy-D-manno-octulosonic-acid transferase domain-containing protein TERM 3435 4364507 - 4364534 + g 74 -15.6 -3.05463 | gap 1 GCTGCCAGACCTGCA GGTCGCCGGGCTG CAG CAGCC-GGCGGCC TTCGGTGCGGCCCGT Daci_3964 4366253 - 4364865 - | phosphomannomutase TERM 3436 4366325 - 4366283 - R 76 -9.1 -4.07568 | gap 2, opp_overlap 4366290 4366291, overlap 4366285 4366286 CTCGTCGGTTGAAAA CAGGGCGCCGCAGCCTGGG GACCTGG CCC-GGCTGCGGC-CCAAG GCGCGATTGTAGGCG TERM 3437 4366323 - 4366285 - R 73 -10.3 -3.63744 | gap 2, opp_overlap 4366290 4366291, overlap 4366283 4366286 CGTCGGTTGAAAACA GGGCGCCGCAGCCTGGG GACCTGG CCC-GGCTGCGGC-CCA AGGCGCGATTGTAGG TERM 3438 4366322 - 4366286 - R 73 -13.8 -2.78032 | gap 2, opp_overlap 4366290 4366291, overlap 4366285 4366283 GTCGGTTGAAAACAG GGCGCCGCAGCCTGGG GACCTGG CCC-GGCTGCGGC-CC AAGGCGCGATTGTAG Daci_3965 4368290 - 4366404 - | propionyl-CoA synthetase Daci_3966 4369212 - 4368406 - | opacity protein and related surface antigens-like protein TERM 3439 4369237 - 4369220 - R 100 -12.7 -5.1861 | overlap 4369234 GTCACCATGAAAAAA GGCGCTC CAAA GAGCGCC CCAAGACGGCGGACC Daci_3967 4369869 - 4369267 - | isochorismatase hydrolase TERM 3440 4369893 - 4369910 + H 91 -14.1 -3.78934 | opp_overlap 4369891 TTTCTTGGGAATATG GGGCGGC GCGG GCCGCCC TTCTTATAGAGGACA TERM 3441 4370017 - 4370003 - H 72 -2.7 -4.75174 | opp_overlap 4370003, overlap 4369995 GAGGTAACTCAAAAA CCCAG GTTTT CGGGG GTCTTATCGAATTTG Daci_3968 4370065 - 4370700 + | NLP/P60 protein TERM 3442 4370747 - 4370730 - f 86 -12.7 -3.97368 | opp_overlap 4370730 GCGCCAATCCACAAA CGCCTGC ACAT GCAGGCG TTTTGTTTTTCAGGA TERM 3443 4370730 - 4370747 + F 100 -12.7 -5.26119 | opp_overlap 4370730 GCGCCAATCCACAAA CGCCTGC ACAT GCAGGCG TTTTGTTTTTCAGGA Daci_3969 4370863 - 4371120 + | transglycosylase-associated protein TERM 3444 4371129 - 4371157 + F 71 -9.5 -3.71284 | opp_overlap 4371110 4371108, overlap 4371130 ACGCTGACCACCCTG CGCGCCAGCCG CATCCGC CGGCTGGTGCA TTCTCTTGATCGACA TERM 3445 4371277 - 4371222 - g 75 -6.6 -4.41548 | gap 1, overlap 4371223 GCACATCGGACAAAA CCCCTCCCCCTCCACCAC-CGCGCCAC GAT GTGGCGCAAGCGGCCGAGAGCGCGCGC AAGTTGCTGCACCGG TERM 3446 4371812 - 4371787 - g 74 -13.9 -3.38768 | overlap 4371769 4371790 CGACAGGACCGACAA GGACGGGCGCG AGGC CGAGCCCGCCC CCGAGCCTTCCGGCA Daci_3970 4371197 - 4371883 + | hypothetical protein Daci_3971 4372730 - 4371891 - | glutathione S-transferase domain-containing protein Daci_3972 4372860 - 4373348 + | hypothetical protein Daci_3973 4373536 - 4374561 + | hypothetical protein Daci_3974 4375863 - 4374562 - | major facilitator transporter TERM 3447 4375702 - 4375657 - G 82 -11.1 -4.13654 | gap 1, opp_overlap 4375689, overlap 4375650 GGTGGAAAGCAGAAA GCCGGC-CTGCAGCAGGGACAG GCC CAATTGCTGCTGCAGCACCGGC ACAGCCGGCGGCAGC Daci_3975 4375961 - 4376680 + | hypothetical protein TERM 3448 4376806 - 4376760 - T 100 -21.7 -3.87373 | gap 1, overlap 4376762 4376784 GACACTCGCCAGAAA CA-GCCAGGCCTGCGAGGTACC AGAT GGCACCCCGCAGGCCTCGCATG CCGGGCAGCAGCCGC TERM 3449 4376803 - 4376762 - T 100 -24.5 -3.5241 | overlap 4376760 4376784 CACTCGCCAGAAACA GCCAGGCCTGCGAGGTACC AGAT GGCACCCCGCAGGCCTCGC ATGCCGGGCAGCAGC Daci_3976 4377486 - 4376869 - | lysine exporter protein LysE/YggA TERM 3450 4377187 - 4377145 - G 86 -14.1 -3.86897 | CGCATTCGTCAGAAA GCCCGTGCGCAGCGC-CGCCA TGT CGGAGAGCGCGGC-CACGGGC TGGCTGGGCAAATCG TERM 3451 4377839 - 4377816 - g 72 -13.8 -3.14344 | CAGGCCGTGCACGAA GGCCTGGAGC GCAT GCGCCAGGCC ACGCAGGAGTTGCGC TERM 3452 4378143 - 4378175 + G 72 -13.4 -3.14132 | gap 2 ACGCGCTCCGACGAG GGGCATGCCACCGGGC TGC GCCCGGAGGC--GCCC TTGCTGCAAAGCCGC Daci_3977 4377552 - 4378481 + | LysR family transcriptional regulator TERM 3453 4378565 - 4378588 + T 100 -15.4 -4.67982 | opp_overlap 4378565 4378569, overlap 4378569 GCGTATCCCAAAGCA GAAAGGCAGC CGAA GCTGCCTTTC TTTTCTTGCCTGGCC TERM 3454 4378588 - 4378565 - T 81 -15.4 -2.92613 | opp_overlap 4378565 4378569, overlap 4378569 GCGTATCCCAAAGCA GAAAGGCAGC CGAA GCTGCCTTTC TTTTCTTGCCTGGCC TERM 3455 4378569 - 4378584 + T 100 -10.4 -4.88795 | opp_overlap 4378565 4378569, overlap 4378565 ATCCCAAAGCAGAAA GGCAGC CGAA GCTGCC TTTCTTTTCTTGCCT TERM 3456 4378584 - 4378569 - T 80 -10.4 -4.14056 | opp_overlap 4378569 4378565, overlap 4378565 ATCCCAAAGCAGAAA GGCAGC CGAA GCTGCC TTTCTTTTCTTGCCT Daci_3978 4380467 - 4378623 - | dihydrolipoamide dehydrogenase Daci_3979 4382174 - 4380483 - | pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase Daci_3980 4384911 - 4382194 - | pyruvate dehydrogenase subunit E1 TERM 3457 4385183 - 4385160 - H 78 -10.2 -3.96449 | GAAGACCCCAAAGAA CGTCGCCGAA GCGC CTCGGCGGCG ACTCCAATACTCCTT TERM 3458 4387708 - 4387718 + G 72 -4.6 -4.50058 | ATGGTTCCGAGGTTG TCGG CTG CCGG TTTTCATTCTGGCTG Daci_3981 4385232 - 4387805 + | PAS/PAC sensor signal transduction histidine kinase Daci_3982 4387802 - 4388452 + | two component LuxR family transcriptional regulator TERM 3459 4388481 - 4388515 + F 100 -12.9 -5.19251 | opp_overlap 4388465 4388480 4388482, overlap 4388482 CGCTTTTTTTCAAAG AGCTGCTAGCGCTTG ATCAA CAAGCCCTAGCAGCA TTTTTATTGGTATTC TERM 3460 4388482 - 4388514 + F 93 -16.4 -3.69924 | opp_overlap 4388465 4388482 4388480, overlap 4388481 GCTTTTTTTCAAAGA GCTGCTAGCGCTTG ATCAA CAAGCCCTAGCAGC ATTTTTATTGGTATT TERM 3461 4388514 - 4388482 - f 89 -16.4 -3.34398 | opp_overlap 4388481 4388482, overlap 4388465 4388480 GCTTTTTTTCAAAGA GCTGCTAGCGCTTG ATCAA CAAGCCCTAGCAGC ATTTTTATTGGTATT TERM 3462 4388702 - 4388719 + G 73 -10.5 -3.94002 | CGCAACAAGGTCAAG GCCTGCG AGGA CGCGGGC TTTCATTCGGTGCTG Daci_3983 4388537 - 4389391 + | methenyltetrahydrofolate cyclohydrolase TERM 3463 4389409 - 4389436 + F 93 -15.6 -3.64703 | opp_overlap 4389406 4389409 AGGAGCTGACAAGCA TCGGGCGGCTCC CCGG GGAGCCGCTTGA TTTCAATGCACCCGA Daci_3984 4389467 - 4391515 + | oligopeptidase A TERM 3464 4391537 - 4391553 + F 100 -15.1 -4.72272 | GGTCCCAGGTCTGCA GCGCCCC GAC GGGGCGC TTTTTCCTGGCCCGG Daci_3985 4391627 - 4392427 + | glutaredoxin TERM 3465 4392776 - 4392747 - g 100 -19.4 -5.252 | opp_overlap 4392739 CAGCGCCACAAAAAA CAGCGCGCGCAA GCCTCG TTGCGCGCGCTG TGCCTGGGTGCATTG Daci_3986 4392459 - 4392842 + | hypothetical protein Daci_3987 4393556 - 4392864 - | ribose-5-phosphate isomerase A Daci_3988 4393591 - 4394637 + | dihydroorotate dehydrogenase 2 TERM 3466 4394735 - 4394762 + T 100 -20 -3.53012 | opp_overlap 4394740, overlap 4394740 CTGAACGCAGAACGC GAAAACGCCCGG CATG CCGGGCGTTTTC TTTGGGAGAGAAGCA TERM 3467 4394757 - 4394740 - T 100 -14.1 -4.21936 | opp_overlap 4394740 4394735 CGCAGAACGCGAAAA CGCCCGG CATG CCGGGCG TTTTCTTTGGGAGAG TERM 3468 4394740 - 4394757 + T 100 -14.1 -4.86731 | opp_overlap 4394740, overlap 4394735 CGCAGAACGCGAAAA CGCCCGG CATG CCGGGCG TTTTCTTTGGGAGAG Daci_3989 4395162 - 4394791 - | hypothetical protein Daci_3990 4395584 - 4395165 - | hypothetical protein Daci_3991 4395904 - 4395593 - | protein of unknown function DUF883 ElaB TERM 3469 4395836 - 4395850 + g 75 -5.6 -4.59773 | opp_overlap 4395829, overlap 4395838 GGACAGCAGACCACG CAGGTC GCC GACCAG TTTTTCAAGATCGGC Daci_3992 4397207 - 4396107 - | 2-hydroxyglutarate dehydrogenase TERM 3470 4397361 - 4397335 - R 100 -16.7 -4.98531 | opp_overlap 4397335 CGCGGAAATGAAAAA GCCCTCCTGAA CAGGT TTCAGGAGGGC TTGATTGGTGGGTGA TERM 3471 4397335 - 4397361 + r 93 -16.7 -3.40867 | opp_overlap 4397335 CGCGGAAATGAAAAA GCCCTCCTGAA CAGGT TTCAGGAGGGC TTGATTGGTGGGTGA Daci_3993 4398536 - 4397820 - | DNA polymerase III, epsilon subunit Daci_3994 4398885 - 4398547 - | ferredoxin, 2Fe-2S type, ISC system Daci_3995 4400779 - 4398911 - | chaperone protein HscA TERM 3472 4399268 - 4399217 - G 73 -12.2 -3.53012 | gap 1 CTGGGCCGTGGCAAA GCCGTCCTGCAGCATG-CGGGCAAC CTC GTCGTCCGACAGGCCGTACGACGGC TTGACATGGATATGG TERM 3473 4399441 - 4399407 - G 71 -11.3 -3.57144 | gap 1 CCGCGCAGCTCGAAA CGCG-CCAGGCTGCGG CAGT CCGCCACCAGGTCGCG CTCGCCCTGCACTAC Daci_3996 4401382 - 4400864 - | co-chaperone Hsc20 TERM 3474 4401419 - 4401394 - R 91 -8.1 -4.84359 | opp_overlap 4401393 TCATGTCGATAAAAA GCCGCCAGCAC CGAA GCGAAGGCGGC CTCTTGAGGGAGTAG Daci_3997 4401823 - 4401500 - | iron-sulfur cluster assembly protein IscA Daci_3998 4402223 - 4401825 - | FeS cluster assembly scaffold IscU Daci_3999 4403487 - 4402267 - | cysteine desulfurase IscS Daci_4000 4404158 - 4403622 - | BadM/Rrf2 family transcriptional regulator Daci_4001 4406522 - 4404384 - | excinuclease ABC subunit B TERM 3475 4406543 - 4406563 + H 80 -3.1 -5.03314 | AACCCGAAAGCCTAC CGTAGCTTG GGG CTAGCCGCG TTTTTTCCACCTCCC Daci_4002 4406600 - 4407796 + | aromatic amino acid aminotransferase TERM 3476 4407812 - 4407828 + F 70 -10.8 -3.54424 | CCCCCGCCCCGGCTA CCCGGC CATGC GCCGGG TTTGCAGAAATGCCG TERM 3477 4407839 - 4407868 + F 93 -7.1 -5.26119 | gap 1, opp_overlap 4407839 CCGGGTTTGCAGAAA TGCCGCCAACGGTG CAT TGCCCT-GGCGGCA TTTTCTTTTTCCGGG Daci_4003 4407990 - 4408970 + | L-carnitine dehydratase/bile acid-inducible protein F Daci_4004 4409303 - 4411765 + | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) Daci_4005 4414274 - 4411779 - | radical SAM domain-containing protein TERM 3478 4413191 - 4413243 + g 79 -15.3 -3.26471 | opp_overlap 4413187, overlap 4413192 TCAGCCACACATCGC GCGCGGTCACGCCCTCGCCGTGGGC CTG GACCAGGGCGCGGGCGTTGCCGGGG TTGGTCTCCAGGTGC TERM 3479 4413192 - 4413242 + g 79 -18.8 -2.55668 | opp_overlap 4413187, overlap 4413191 CAGCCACACATCGCG CGCGGTCACGCCCTCGCCGTGGGC CTG GACCAGGGCGCGGGCGTTGCCGGG GTTGGTCTCCAGGTG Daci_4006 4415342 - 4414350 - | AraC family transcriptional regulator TERM 3480 4414854 - 4414805 - G 76 -7 -4.30576 | TGTTGACCAGCAAAA GCTCGCCCATGCGCGC-GGCCGAC AGGC GCCAGCCCGGGCGC-CGCGCCAGC GTCTCCAGCGTGAGC TERM 3481 4415246 - 4415206 - G 77 -14.6 -3.18383 | ACCTGTATCCAGTAA GGCGCACCGCGCGCCATG CGGAT CATGGCGCCCGTGACGCC CGTGGACTTCAGGCT TERM 3482 4415300 - 4415284 - G 95 -15.1 -4.13767 | GCGGTCAGCGCAAAA CGCGCCG TCA CGGCGCG CTCTGACCGGCAAAT Daci_4007 4415649 - 4415410 - | hypothetical protein TERM 3483 4415487 - 4415467 - G 70 -12.5 -3.30441 | opp_overlap 4415469 CACCAGCTCGGAGAA CTGCTGGGC GCT GCCCAGCCG CTCGGCCGCCAGCAG Daci_4008 4417382 - 4415646 - | monooxygenase FAD-binding Daci_4009 4418350 - 4417484 - | LuxR family transcriptional regulator TERM 3484 4418396 - 4418373 - R 100 -11.7 -4.7629 | gap 1 GCAGGAATGCAAAAA GGCCGGC-GC TTCGC GCAGCCGGCC TGGGTGAGTATGTGG TERM 3485 4418463 - 4418428 - R 80 -10.5 -4.06562 | opp_overlap 4418430 4418431, overlap 4418415 4418429 4418432 AACTGGAATGATAAA TCCA-GCGCAGCGAGGC AAGA GCCT-GCTGCGCCTGGT TCGCGGCCTGTTCGC TERM 3486 4418462 - 4418429 - R 76 -14 -3.03214 | opp_overlap 4418430 4418431, overlap 4418415 4418428 4418432 ACTGGAATGATAAAT CCA-GCGCAGCGAGGC AAGA GCCT-GCTGCGCCTGG TTCGCGGCCTGTTCG TERM 3487 4418458 - 4418432 - R 77 -14.5 -2.7361 | gap 1, opp_overlap 4418431 4418430, overlap 4418429 4418428 GGAATGATAAATCCA GCGCAGCGAGGC AAGA GCCT-GCTGCGC CTGGTTCGCGGCCTG Daci_4010 4418745 - 4418575 - | hypothetical protein Daci_4011 4418885 - 4419541 + | hypothetical protein Daci_4012 4420741 - 4419563 - | amidohydrolase Daci_4013 4421738 - 4420752 - | hypothetical protein Daci_4014 4421870 - 4422820 + | LysR family transcriptional regulator Daci_4015 4423635 - 4423372 - | hypothetical protein Daci_4016 4424890 - 4423676 - | hypothetical protein TERM 3488 4425533 - 4425573 + G 71 -11.3 -3.60792 | gap 1, overlap 4425518 4425519 TGGTCCTTGCGCCGC TGGCTGCAGACGGCGCAA AGCCGC TTGTGCCGTGT-CAGCCA TTTGAGGGTTACCGA Daci_4017 4425440 - 4425679 + | hypothetical protein TERM 3489 4426360 - 4426411 + G 74 -12.8 -3.61398 | opp_overlap 4426378 GGGCTCCAGCCCCGT GGTGCCGGAGGAATGGAAGCGCTT TGGC AAGCGCATCCTGACCACCGACACC TTGTTCGAACGCAAG Daci_4018 4425917 - 4427341 + | dihydrolipoamide dehydrogenase Daci_4019 4429186 - 4427366 - | ABC transporter TERM 3490 4430618 - 4430658 + G 85 -16.8 -3.63895 | gap 1, opp_overlap 4430585 CGGCGCGCGCGCGCT GGCCCGGGCGCGCCGGCGT GCTC ACGCTGGCG-GCCCTGCCC TTTGCCGTGATTGAC TERM 3491 4431223 - 4431190 - g 86 -10.3 -4.56597 | opp_overlap 4431191, overlap 4431191 4431216 CTGGTCGCGGAAAAA GGACATGGCCTGTCC CACT GGAGAAGCCATGTCT TCGTGGGCATGAGCC TERM 3492 4431222 - 4431191 - g 74 -13.8 -3.33744 | opp_overlap 4431191, overlap 4431190 4431216 TGGTCGCGGAAAAAG GACATGGCCTGTCC CACT GGAGAAGCCATGTC TTCGTGGGCATGAGC Daci_4020 4429396 - 4431318 + | K potassium transporter Daci_4021 4432006 - 4431332 - | hypothetical protein TERM 3493 4432239 - 4432209 - H 78 -15.4 -2.50016 | overlap 4432208 4432206 GCGCAGGATTAATAT TCCGTGCGTGCCAC CCC GAGGCAGGCACGGA GACAGGATCGGCCCG TERM 3494 4432515 - 4432498 - g 81 -3.3 -4.82901 | overlap 4432499 GCTGGTCGAGAAAAA GCGCTGG CTGA CCAACGA CGAGTTCGTGGAGGA Daci_4022 4432328 - 4432939 + | chromate transporter Daci_4023 4432936 - 4433544 + | chromate transporter Daci_4024 4433591 - 4434571 + | aldo/keto reductase Daci_4025 4435470 - 4434616 - | silent information regulator protein Sir2 TERM 3495 4435468 - 4435434 - G 100 -2.7 -5.63103 | gap 2, opp_overlap 4435467, overlap 4435435 4435437 4435438 GGCGAAGGAAAAAAA GCAGGCCATTGTGCGGC AGC GCCGCCCCAGGG-C-GC ATCAAATGCCTTTTT Daci_4026 4436174 - 4435470 - | TetR family transcriptional regulator TERM 3496 4436214 - 4436226 + H 75 -7.7 -4.2828 | overlap 4436209 TGACAAGGCTCGATG TGGAC AGC GTCCA TTTTAGTCCCTAGCA Daci_4027 4436344 - 4436847 + | 3-demethylubiquinone-9 3-methyltransferase Daci_4028 4436918 - 4437340 + | 3-demethylubiquinone-9 3-methyltransferase Daci_4029 4437419 - 4437805 + | hypothetical protein Daci_4030 4437814 - 4438290 + | activator of Hsp90 ATPase 1 family protein Daci_4031 4438316 - 4438717 + | hypothetical protein Daci_4032 4439505 - 4438714 - | RNA methyltransferase TERM 3497 4439636 - 4439680 + H 85 -9.5 -4.59853 | gap 3, overlap 4439644 CCTTCCAGCAGCCCC TGCACATTGCGGCATGCACCGT AGCC ACGG-GCATGCCGC--TTTGCA TTTTTCCACGCTTGA TERM 3498 4439644 - 4439674 + H 100 -17.7 -3.99805 | gap 1, overlap 4439636 CAGCCCCTGCACATT GCGGCATGCACCGT AGCC ACGG-GCATGCCGC TTTGCATTTTTCCAC TERM 3499 4439995 - 4440025 + G 72 -13.2 -3.17392 | GGGCACCTTTGCGGC GGCCGTGGTCGCCG TGG CGGCCAGCATGGCC TTCCCTTCCACCATC Daci_4033 4439711 - 4440946 + | serine/threonine transporter SstT Daci_4034 4441681 - 4440971 - | ABC transporter related Daci_4035 4441719 - 4442363 + | arylesterase TERM 3500 4442521 - 4442538 + T 74 -3.3 -4.72986 | overlap 4442522 CTTCTTCTGCTTCTT GGCCAGT TCGC GCTGGCG TTTTTCATAGGCGTA Daci_4036 4443442 - 4442633 - | integral membrane protein Daci_4037 4445306 - 4443555 - | alkaline phosphatase TERM 3501 4444002 - 4444014 + g 72 -9.1 -4.07885 | GGGAATGCTGGGCTG GGCCA GGA TGGCC TTTTCCGCCGCCGTC TERM 3502 4444557 - 4444596 + g 82 -15 -3.41051 | gap 1, opp_overlap 4444556 CCAGACCGCAATCAT GGGCGCTGCCG-CATGCAG GGC CTGCAGGTCGGCATCGCTC TTGTACTGGGCATGG Daci_4038 4446673 - 4445405 - | Cys/Met metabolism pyridoxal-phosphate-dependent protein TERM 3503 4446700 - 4446680 - R 90 -6.1 -5.28176 | opp_overlap 4446680 TTCAGGCATAAAAAA CCAGACG GACAAAG CGCCTGG TTTTCATTGGGGGAG Daci_4039 4447204 - 4446734 - | transport-associated protein Daci_4040 4447340 - 4449100 + | sulphate transporter Daci_4041 4449066 - 4449914 + | diguanylate cyclase Daci_4042 4449886 - 4450770 + | cobyrinic acid ac-diamide synthase Daci_4043 4450836 - 4451627 + | rhodanese domain-containing protein Daci_4044 4452238 - 4451624 - | flavodoxin/nitric oxide synthase TERM 3504 4452199 - 4452187 - G 70 -4.1 -4.42974 | CTGACATACAAGAAA TCCAA TCC TCGGA CGCCCTGCGCAGCCA TERM 3505 4452283 - 4452257 - R 100 -25.2 -3.61178 | TCCATTCACGCCAAA GGGCCCCGCAGC GCT GCTGCGGGGCCC ACTCAAGACAGTAGC Daci_4045 4452746 - 4452339 - | DoxX family protein TERM 3506 4452501 - 4452489 - G 72 -9.1 -4.08557 | GGTGTGAAAGAAGAA GCTGG CCA CCAGC GTGAAGAACGCCAGC Daci_4046 4453492 - 4452791 - | pirin domain-containing protein TERM 3507 4453058 - 4453073 + g 72 -6 -4.30576 | overlap 4453050 GGGCGAGGCCACCAG GCGCAG CCGG CCGCGC TTTTCCTCGTCGGCA Daci_4047 4453626 - 4454564 + | LysR family transcriptional regulator TERM 3508 4454754 - 4454743 - g 82 -3.6 -5.07486 | overlap 4454752 CACGGTCAAGAAAAA GGCC ACCA AGCC CCCCGAAGCCTCCAA Daci_4048 4454603 - 4455826 + | FAD dependent oxidoreductase Daci_4049 4455882 - 4456820 + | glutamate--tRNA ligase TERM 3509 4457391 - 4457379 - g 86 -2.6 -5.18726 | opp_overlap 4457390, overlap 4457385 4457388 CTGGCACAAGAAAAA GCAC AACAA GCGC CGCCTGATCCAGGAG Daci_4050 4456861 - 4457640 + | tRNA (guanine-N(7)-)-methyltransferase Daci_4051 4457627 - 4458697 + | diguanylate cyclase Daci_4052 4459970 - 4458720 - | diguanylate cyclase TERM 3510 4459155 - 4459121 - G 70 -15.7 -2.77523 | gap 1, overlap 4459118 4459116 CGTCCACGAACATCA CGCTCAGGGCC-GCAC CCAG GCGCTGGCCCTGGGCG ACCTCGGAGGCCAGG Daci_4053 4461143 - 4459980 - | periplasmic sugar-binding protein, putative TERM 3511 4460278 - 4460221 - G 78 -12.1 -3.72576 | gap 4, opp_overlap 4460221, overlap 4460222 GCGCCGGTCAGGAAA TGGCCGCCCGCCAGTGCCGACAGCT-CGC CCGT GCGCAGC-GCCGTCA-TGGCGG-CGGCCG ATGAATTGATGGCGC TERM 3512 4460277 - 4460222 - G 72 -15.6 -2.83403 | gap 4, opp_overlap 4460221, overlap 4460221 CGCCGGTCAGGAAAT GGCCGCCCGCCAGTGCCGACAGCT-CGC CCGT GCGCAGC-GCCGTCA-TGGCGG-CGGCC GATGAATTGATGGCG TERM 3513 4461116 - 4461092 - G 95 -22.9 -3.05844 | GCGCCCACGGCAAGA CGCCCCGGTGG AGT CCACCGGGGCG TCCCGAAGAAGGAGC Daci_4054 4463784 - 4461160 - | alanyl-tRNA synthetase TERM 3514 4462323 - 4462298 - G 73 -9.8 -3.86015 | gap 1, opp_overlap 4462283 GACTCGGCGTAGAAA GGCGTGGT-GT CGAGC ACGACCACGCC GCTCTGGCCGGCCTT TERM 3515 4464349 - 4464338 - g 71 -2.2 -4.59853 | gap 1 CCAAGCCGCCAAAAA GC-CG CAT CGTGC CCTGGCTCATCGGAC Daci_4055 4464220 - 4464579 + | hypothetical protein TERM 3516 4464600 - 4464616 + T 93 -15.1 -3.75153 | opp_overlap 4464600, overlap 4464612 AGTCACAACGAAAAA GGCCGGC AGA GCCGGCC TTTGGCTTGCAAGGG TERM 3517 4464616 - 4464600 - T 100 -15.1 -4.93968 | opp_overlap 4464600 4464612 AGTCACAACGAAAAA GGCCGGC AGA GCCGGCC TTTGGCTTGCAAGGG Daci_4056 4465974 - 4464637 - | major facilitator transporter TERM 3518 4466193 - 4466181 - H 77 -7.7 -4.37886 | opp_overlap 4466165 TGACGTTGGACAAAA TGTCC AAT GGACA AATTTATACTTCGTA Daci_4057 4466273 - 4467319 + | ubiquinol oxidase, subunit II Daci_4058 4467455 - 4469392 + | cytochrome o ubiquinol oxidase, subunit I Daci_4059 4469385 - 4470017 + | cytochrome o ubiquinol oxidase, subunit III Daci_4060 4470018 - 4470458 + | cytochrome o ubiquinol oxidase subunit IV TERM 3519 4470524 - 4470556 + F 95 -11.4 -4.67904 | gap 1, opp_overlap 4470473 4470472, overlap 4470497 4470526 CGTGGCCCACTCGCT C-AGGCGATGCTCAT CTCG GTGGGCATCGCCTTG TTTTTGGGCTTCATC TERM 3520 4470526 - 4470553 + F 100 -14.2 -4.44355 | opp_overlap 4470473 4470472, overlap 4470497 4470524 TGGCCCACTCGCTCA GGCGATGCTCAT CTCG GTGGGCATCGCC TTGTTTTTGGGCTTC Daci_4061 4470530 - 4471243 + | Surfeit locus 1 family protein TERM 3521 4471288 - 4471264 - f 80 -14.3 -3.08679 | opp_overlap 4471265 TCGCTCCAGGCAACA GGGCCACCGAT GAC ATCGGTGGCCT TTTTTACGCCAGTCC TERM 3522 4471265 - 4471287 + F 100 -17.8 -5.0133 | opp_overlap 4471264 CGCTCCAGGCAACAG GGCCACCGAT GAC ATCGGTGGCC TTTTTTACGCCAGTC TERM 3523 4472149 - 4472126 - g 74 -11.8 -3.73775 | gap 1, opp_overlap 4472120, overlap 4472127 CCGACCTGCAGGAAA TGCAGCAGCAG CTG CTGC-GCTGCA AGTCCATCGTCTCCA Daci_4062 4471357 - 4472658 + | histidine kinase TERM 3524 4473049 - 4473025 - g 72 -15.7 -2.82987 | overlap 4473016 CCAACACCGACGATA TCGAGGCCGCC TTC GGCCGCCTCGA AGGCCGCACCGACGT Daci_4063 4472688 - 4473224 + | two component Fis family transcriptional regulator TERM 3525 4473270 - 4473240 - T 85 -15.5 -3.18264 | opp_overlap 4473246, overlap 4473246 GGCGGCAGGCACCAA GACAAACCGGGCC TCAAG GGCCCGGTTTTTC ATTGCGCGGCCATGG TERM 3526 4473264 - 4473246 - T 95 -13.1 -4.24075 | opp_overlap 4473246, overlap 4473240 AGGCACCAAGACAAA CCGGGCC TCAAG GGCCCGG TTTTTCATTGCGCGG TERM 3527 4473246 - 4473264 + T 100 -13.8 -4.8622 | opp_overlap 4473246 4473240 AGGCACCAAGACAAA CCGGGCCT CAA GGGCCCGG TTTTTCATTGCGCGG Daci_4064 4474210 - 4473305 - | protoheme IX farnesyltransferase Daci_4065 4475727 - 4474207 - | cytochrome oxidase assembly TERM 3528 4475645 - 4475629 - G 79 -15.1 -3.35679 | overlap 4475600 GCGCCCCATGCACAA GGCCCGC CAA GCGGGCC CGGTCGCTGCAACTT TERM 3529 4476445 - 4476387 - g 71 -9.8 -3.81414 | opp_overlap 4476398 AGTCCGAACGAACAA GGGCAACACGGTGC-GCATACGGCG-AGAA GCC TTCTGCGCCG--TGCTGCGCCATCTTGCCC AGGAGCATCACGGCC Daci_4066 4476241 - 4476636 + | hypothetical protein TERM 3530 4476928 - 4476889 - g 73 -7.1 -4.11216 | gap 1, overlap 4476906 GCTGCAGGCCCAAAA GGCTGCGCTGGAGCACAG ACAGG CCATGATCCAGGGC-GCC ATCCAGGTGCTCGAG Daci_4067 4476770 - 4476970 + | hypothetical protein Daci_4068 4476967 - 4477233 + | hypothetical protein Daci_4069 4477385 - 4477666 + | hypothetical protein Daci_4070 4478493 - 4477705 - | methyltransferase type 11 TERM 3531 4478953 - 4478926 - R 75 -8.4 -4.16842 | gap 1 CGTAGTCCCAAGAAA GGCCGA-GAGCCG ATC CGGCTCATGGACC TGGCCCCCGCCGTCT TERM 3532 4479005 - 4478995 - R 81 -4.6 -4.87626 | overlap 4478997 TGCGAACAGGAAAAA CCCG CCA CAGG AGCCCGCCAATTCCA TERM 3533 4479152 - 4479125 - R 100 -15.6 -4.09864 | opp_overlap 4479130, overlap 4479126 4479130 AGCGATTCCCCAAAA CGAAAGCCCGCC AGAT GGCGGGCTTTCT CATGCCATCGCGGAC TERM 3534 4479151 - 4479126 - R 90 -19.1 -3.05597 | opp_overlap 4479130, overlap 4479125 4479130 GCGATTCCCCAAAAC GAAAGCCCGCC AGAT GGCGGGCTTTC TCATGCCATCGCGGA TERM 3535 4479130 - 4479147 + r 91 -14.1 -3.9712 | opp_overlap 4479130 4479126 4479125 TTCCCCAAAACGAAA GCCCGCC AGAT GGCGGGC TTTCTCATGCCATCG TERM 3536 4479147 - 4479130 - R 100 -14.1 -4.19735 | opp_overlap 4479130, overlap 4479126 4479125 TTCCCCAAAACGAAA GCCCGCC AGAT GGCGGGC TTTCTCATGCCATCG TERM 3537 4479511 - 4479496 - R 95 -11.8 -4.51238 | GCCAGAAAAGACAAA GCCCGC GGGT GCGGGC TGCTGGTCAGATTTC Daci_4071 4479805 - 4479518 - | histone family protein nucleoid-structuring protein H-NS TERM 3538 4479710 - 4479724 + g 77 -4.2 -4.70879 | GAGCTCGCGAACCTT GGCG ATGGCCC CGCC TTTTTCGGCTTTCAG Daci_4072 4479940 - 4480191 + | hypothetical protein TERM 3539 4480494 - 4480522 + T 100 -13.9 -4.41895 | gap 1 GGCATTTTTCTTCCA GGGCCCGC-AGC TTCGCC GCTTGCGGGCCC TTTTCGTTGCCCCTT TERM 3540 4481125 - 4481152 + T 76 -7 -4.52589 | gap 1, opp_overlap 4481128, overlap 4481128 4481138 CGTCGCAGGCATTCA CAAGCTCG-CAGC ACC GCTGGCGGGCTTC TTTTCTGTGGGGGGC TERM 3541 4481128 - 4481149 + T 82 -8.7 -4.38141 | gap 1, opp_overlap 4481128, overlap 4481125 4481138 CGCAGGCATTCACAA GCTCG-CAGC ACC GCTGGCGGGC TTCTTTTCTGTGGGG TERM 3542 4481466 - 4481488 + T 74 -3.2 -4.73388 | opp_overlap 4481470, overlap 4481468 4481469 CCGAACTGGACAGCA AAAAGCCCGC ATC GCGGGCCGTC TTTTTGGTGAGACTT TERM 3543 4481484 - 4481470 - T 100 -12.8 -4.80882 | opp_overlap 4481469 4481468 4481466 ACTGGACAGCAAAAA GCCCGC ATC GCGGGC CGTCTTTTTGGTGAG Daci_4073 4482052 - 4481513 - | hypothetical protein TERM 3544 4481926 - 4481984 + g 74 -10.9 -3.8186 | gap 2, opp_overlap 4481919 4481921, overlap 4481927 GGATCAGACAGCGCT GGCCCGCGCGCCAGGCCGGGGCGAACGTC CAG GAC-TTCGCCAGGGTCTCGCGC-CGAGCG TTGTTCGTTGACATG TERM 3545 4482264 - 4482245 - H 89 -7.2 -5.055 | overlap 4482247 GCAATCCGCAAAAAA CACTGGTT AAAT AACCAGTA TGAAAACCCAAATTA TERM 3546 4482262 - 4482247 - H 75 -7.6 -4.15235 | overlap 4482245 AATCCGCAAAAAACA CTGGTT AAAT AACCAG TATGAAAACCCAAAT Daci_4074 4482605 - 4482991 + | hypothetical protein Daci_4075 4483285 - 4483010 - | hypothetical protein Daci_4076 4483650 - 4483282 - | hypothetical protein Daci_4077 4484129 - 4483653 - | hypothetical protein Daci_4078 4484819 - 4484421 - | hypothetical protein TERM 3547 4484869 - 4484856 - R 100 -9.5 -5.60993 | TTGGGCATAAAAAAA CCCGC CGAA GCGGG TAATAAAATTGTTGA Daci_4079 4485596 - 4484889 - | hypothetical protein Daci_4080 4489635 - 4486261 - | hypothetical protein Daci_4081 4490393 - 4489983 - | NLP/P60 protein Daci_4082 4491319 - 4490390 - | hypothetical protein Daci_4083 4491909 - 4491322 - | hypothetical protein Daci_4084 4495661 - 4491906 - | lambda family phage tail tape measure protein TERM 3548 4495705 - 4495680 - R 95 -12.5 -4.27316 | TTCCCCAATGCAAAA GCCCGCAAGGC GCGA ACCGTGCGGGC ATAAAAAAAGCCACC TERM 3549 4495730 - 4495715 - R 100 -10.4 -5.60993 | opp_overlap 4495714 4495712 4495715 GCGGGCATAAAAAAA GCCACC CTGA GGTGGC ATGTTTTATAAATCA TERM 3550 4495988 - 4496000 + r 83 -4.8 -5.15969 | opp_overlap 4495984 4495988, overlap 4495984 4495983 CTTGAAACCAACGTA TGCG CCATA CGCA TTTTTTGCGTTAACC Daci_4085 4496546 - 4496232 - | hypothetical protein TERM 3551 4496502 - 4496549 + g 73 -12.2 -3.53444 | gap 3, overlap 4496501 4496503 GATGGCAGCCAGTTC CTG-T-GCCGATGGCGCGCGC TTGTAGATC GCGCGCGCCA-CGGCCATCAG TTTCCCAGGCGGTCG Daci_4086 4497019 - 4496546 - | hypothetical protein TERM 3552 4497093 - 4497051 - R 100 -10 -4.80882 | gap 3 AGGGGAGACGAAAAA GCCCG-CTG-CC-CTGCCCTC GCTA AAAGGCAGTGGACAGGCGGGC GGAAATGCGCAGCCG Daci_4087 4497786 - 4497133 - | tail protein 3 TERM 3553 4497824 - 4497808 - R 100 -10.8 -5.27335 | opp_overlap 4497806, overlap 4497790 CCTTTCAAAGAAAAA GCCCGC GAGGT GCGGGC GGTGTCTGCCCTCAT TERM 3554 4497868 - 4497853 - R 89 -10.4 -4.56775 | opp_overlap 4497861 ATCGGGCGTGAAAAA GCCACC CGGA GGTGGC TCAACTCTTCATGCG Daci_4088 4498302 - 4497877 - | hypothetical protein Daci_4089 4498745 - 4498299 - | hypothetical protein Daci_4090 4499806 - 4498745 - | hypothetical protein Daci_4091 4500198 - 4499809 - | hypothetical protein Daci_4092 4500744 - 4500199 - | pathogenesis-related transcriptional factor and ERF protein TERM 3555 4500773 - 4500817 + r 80 -10 -4.07568 | gap 1, overlap 4500775 4500777 CTAAAAATGATGGTT TGGTTAGAGCCGCCTTGGTGT TAGC GCACCTTGGCGGCTC-GACTA TTTTAGGGGCCAACG TERM 3556 4500775 - 4500815 + r 73 -10.4 -3.63744 | gap 1, overlap 4500773 4500777 AAAAATGATGGTTTG GTTAGAGCCGCCTTGGTGT TAGC GCACCTTGGCGGCTC-GAC TATTTTAGGGGCCAA Daci_4093 4501346 - 4500849 - | hypothetical protein Daci_4094 4501582 - 4501349 - | hypothetical protein TERM 3557 4501624 - 4501604 - R 100 -13.3 -4.55287 | TCCAGGCATAGAAAA GCCCACTGC TGG GCAATGGGC TGGGTATGCCGGGTC Daci_4095 4502648 - 4501668 - | hypothetical protein TERM 3558 4501980 - 4502013 + g 70 -15.3 -2.71364 | opp_overlap 4501970 4501965, overlap 4501982 CGACAGGATGGTCTC CATCGTCGTGGCGCT GTAA GGCGTCGCGGCGATG TAGTTGAAGGCCTCC Daci_4096 4503131 - 4502652 - | hypothetical protein Daci_4097 4504283 - 4503147 - | hypothetical protein Daci_4098 4505638 - 4504280 - | HI1409 family phage-associated protein Daci_4099 4506882 - 4505638 - | PBSX family phage terminase large subunit TERM 3559 4505952 - 4505978 + g 72 -15 -2.83164 | CGTGGCTGATCGTCT CGGGGCGCGCGG AGT CGGCGCGCACCG TGTGCTGCTCGATGC Daci_4100 4507495 - 4506863 - | terminase small subunit TERM 3560 4507790 - 4507771 - R 100 -12.8 -4.54727 | opp_overlap 4507770 4507768 4507771 TGGCGGAAACGAAAA GGCCCCGC GTCA GCGAGGCC GTGTTGATAGTCACC TERM 3561 4507932 - 4507967 + r 74 -11.9 -3.5241 | opp_overlap 4507937, overlap 4507937 GTTCGGGCGCAAATG GAAAAGCCCGCAGGG CGCGAA CCATGCGGGCTTTTG TGTTTCTCACGCCTC TERM 3562 4507962 - 4507937 - R 100 -12.5 -4.35524 | opp_overlap 4507932 4507937 GGCGCAAATGGAAAA GCCCGCAGGGC GCGA ACCATGCGGGC TTTTGTGTTTCTCAC TERM 3563 4507937 - 4507962 + r 100 -11.8 -4.84918 | opp_overlap 4507937, overlap 4507932 GGCGCAAATGGAAAA GCCCGCAGGG CGCGAA CCATGCGGGC TTTTGTGTTTCTCAC Daci_4101 4508450 - 4507992 - | hypothetical protein TERM 3564 4508337 - 4508352 + g 82 -3.2 -4.99035 | gap 1, overlap 4508333 GTACTTGCCTTCGGC GCTGGCG CAC CGCT-GC TTTTTGTATCGGTCC Daci_4102 4509042 - 4508467 - | lambda NinG family protein TERM 3565 4508535 - 4508557 + g 70 -12 -3.39327 | ACTTCTTGAGGTATT CCACGTCGTG GGT CACGACCTGG TTCTGGGTGTAGAGC Daci_4103 4509706 - 4509368 - | hypothetical protein Daci_4104 4509896 - 4509699 - | hypothetical protein Daci_4105 4510141 - 4509893 - | hypothetical protein Daci_4106 4510676 - 4510317 - | hypothetical protein Daci_4107 4511182 - 4510673 - | hypothetical protein Daci_4108 4511481 - 4511179 - | hypothetical protein Daci_4109 4512463 - 4511780 - | hypothetical protein TERM 3566 4512214 - 4512239 + g 84 -8.1 -4.72729 | overlap 4512234 CCTGGAACACCTTCT GCGCGATGGCC GTCT GGCCGGCGAGC TTTTGCTTTTGCTTA Daci_4110 4513883 - 4512519 - | DnaB domain-containing protein Daci_4111 4514781 - 4513876 - | hypothetical protein TERM 3567 4514312 - 4514325 + g 72 -6.7 -4.27463 | opp_overlap 4514312, overlap 4514286 4514309 GACGAAGTCGACAAA GAAGC TTTA GCTTC TTCTTTCTCTTCTTC TERM 3568 4514876 - 4514914 + r 78 -13.3 -3.14321 | gap 1, opp_overlap 4514882, overlap 4514882 CCCGAGACCAGACTC CTAGAACGCCTGCTAGCT CTCC AGCT-GCAGGCGTTTTTG CTTTTGCCCTTTCAT TERM 3569 4514908 - 4514882 - R 76 -13.1 -3.32521 | gap 1, opp_overlap 4514876 4514882 ACCAGACTCCTAGAA CGCCTGCTAGCT CTCC AGCT-GCAGGCG TTTTTGCTTTTGCCC TERM 3570 4514882 - 4514908 + r 100 -13.1 -5.0925 | gap 1, opp_overlap 4514882, overlap 4514876 ACCAGACTCCTAGAA CGCCTGCTAGCT CTCC AGCT-GCAGGCG TTTTTGCTTTTGCCC TERM 3571 4515166 - 4515178 + r 84 -6.2 -4.91511 | opp_overlap 4515150 4515146, overlap 4515146 CAGTCGCCCAATAGG GCCC TGCGC GGGC TTTTTCTCATCGCGT Daci_4112 4516359 - 4516060 - | hypothetical protein TERM 3572 4516552 - 4516542 - g 72 -8.2 -4.02253 | TCAAGAACGGAGAAA CCGG GGT CCGG ATGGAGTCGCTGCAG Daci_4113 4516397 - 4517047 + | putative phage repressor TERM 3573 4517479 - 4517466 - g 78 -5.9 -4.58283 | CAAGCCTGTGAAAAA CCGCG CCGG CGCAG AGTTCGACAACTGGG Daci_4114 4517062 - 4517649 + | hypothetical protein TERM 3574 4517982 - 4517963 - g 71 -2.9 -4.66833 | gap 1 GGTCAATGCGAAAAA CAGC-TAC GGTGG GTACGCTG GGTTTAAGTCGTTCG Daci_4115 4517670 - 4518101 + | hypothetical protein TERM 3575 4519120 - 4519136 + F 89 -10.8 -4.72272 | opp_overlap 4519118 4519116 4519112 4519120 TAGAGAACGAATAGA GCCCGC CCCGA GCGGGC TTTTTCATGCCCGGC TERM 3576 4519468 - 4519484 + F 89 -7.2 -5.1287 | opp_overlap 4519468 4519448 CCCACCCCAACACAA GCCCTG CACGA CGGGGC TTTTTTGCGTCTGGG TERM 3577 4519615 - 4519604 - f 71 -7.2 -4.25056 | CATCGCAGCAACAAA CGCC CCAG GGCG GCTGCGGTGGGTGGG TERM 3578 4520275 - 4520249 - f 84 -11.6 -4.09243 | opp_overlap 4520249, overlap 4520253 GACATCTGGGCAAAA CAAAGCGCATTC GCC GAGTGCGCTTCG TTTTTTCAACCACCA TERM 3579 4520249 - 4520275 + F 100 -11.6 -5.00616 | opp_overlap 4520249 4520253 GACATCTGGGCAAAA CAAAGCGCATTC GCC GAGTGCGCTTCG TTTTTTCAACCACCA TERM 3580 4520271 - 4520253 - f 85 -8.8 -4.64861 | opp_overlap 4520249, overlap 4520249 TCTGGGCAAAACAAA GCGCATTC GCC GAGTGCGC TTCGTTTTTTCAACC Daci_4116 4520302 - 4520643 + | hypothetical protein TERM 3581 4520673 - 4520706 + F 100 -13.9 -4.56597 | opp_overlap 4520673 4520678 CGCACAGGGGCAGAA CCAAAGGCGCCATGA CCCG TTGCGGCGCCTTTGG TTTTTCAACAGGAGA TERM 3582 4520706 - 4520673 - f 72 -11.8 -3.32343 | opp_overlap 4520673, overlap 4520678 CGCACAGGGGCAGAA CCAAAGGCGCCA TGACCCGTTG CGGCGCCTTTGG TTTTTCAACAGGAGA Daci_4117 4520726 - 4520971 + | hypothetical protein TERM 3583 4521052 - 4521029 - g 70 -8.9 -3.93236 | gap 1, opp_overlap 4521027 GATGAAGTCCATAAA CGC-GCAGGT TGCCG ACCTGCTGCG CCCTTTCCTGAAGGA Daci_4118 4521015 - 4521236 + | hypothetical protein TERM 3584 4521405 - 4521423 + F 100 -12.4 -5.04601 | GGCTCTTTACACCCA GGCTCTGC AAT GCAGGGCC TTTTTCGTTTCTGGC Daci_4119 4521463 - 4521861 + | hypothetical protein Daci_4120 4521858 - 4522151 + | hypothetical protein TERM 3585 4522450 - 4522425 - g 79 -7.5 -4.40358 | gap 1, overlap 4522428 4522429 ACGCATCGCAGAAAA GAACGGGCGAGC CGC GCTCGCCCAA-C AACCCCAGGCGCTGG TERM 3586 4522448 - 4522428 - g 95 -14.7 -4.32067 | overlap 4522425 4522429 CATCGCAGAAAAGAA CGGGCGAGC CGC GCTCGCCCA ACAACCCCAGGCGCT TERM 3587 4522447 - 4522429 - g 80 -16 -3.18517 | overlap 4522428 4522425 ATCGCAGAAAAGAAC GGGCGAGC CGC GCTCGCCC AACAACCCCAGGCGC Daci_4121 4522144 - 4522488 + | hypothetical protein TERM 3588 4522534 - 4522514 - f 81 -5.3 -4.82091 | overlap 4522517 AAGCAAACAAAGAAA CACGCATCC CCC GGAAGCTTG GCGCGCGAGTACCGC Daci_4122 4522807 - 4523184 + | hypothetical protein Daci_4123 4523186 - 4523593 + | hypothetical protein TERM 3589 4523709 - 4523682 - g 75 -8.4 -4.19817 | gap 1, opp_overlap 4523693 GCCACTCATCGAAAA GGCCGA-GCGCTG GTC CAGCACCTGGGCC TTTCTCACGGAAGGC TERM 3590 4523693 - 4523709 + G 73 -10.1 -3.85698 | opp_overlap 4523682 AAAAGGCCGAGCGCT GGTCCAG CAC CTGGGCC TTTCTCACGGAAGGC Daci_4124 4523590 - 4523784 + | hypothetical protein Daci_4125 4524009 - 4524617 + | ERF family protein Daci_4126 4524627 - 4524884 + | hypothetical protein TERM 3591 4524944 - 4524932 - g 70 -3.3 -4.49556 | opp_overlap 4524932, overlap 4524928 4524935 CGCGCAGCAAAGAAA CAGCG GCG CCCTG TTCCTGGCGCTGGGC Daci_4127 4524893 - 4525384 + | hypothetical protein Daci_4128 4525421 - 4525708 + | histone family protein nucleoid-structuring protein H-NS Daci_4129 4525741 - 4526130 + | hypothetical protein TERM 3592 4526175 - 4526198 + F 71 -8 -4.07859 | overlap 4526176 4526183 GCTGTCCTGATACCT CCCCTCCCGG TATG CCGCGAGGGC TTTCCTGTTTCTTCA Daci_4130 4526310 - 4527257 + | hypothetical protein Daci_4131 4527260 - 4527739 + | hypothetical protein Daci_4132 4527736 - 4528143 + | HNH endonuclease TERM 3593 4528286 - 4528273 - g 75 -4.5 -4.56597 | opp_overlap 4528279 4528282 CGTCCGCCTCAAAAA TGGCG ACAT CACCA GCGGTGTGGTTCTGG Daci_4133 4528145 - 4528498 + | hypothetical protein Daci_4134 4528579 - 4529028 + | hypothetical protein Daci_4135 4529025 - 4529216 + | hypothetical protein Daci_4136 4529218 - 4529472 + | hypothetical protein TERM 3594 4529543 - 4529560 + G 83 -12.7 -4.09685 | opp_overlap 4529542 4529537 ATGAACCAATCACAT GGCCAGC ACCC GCTGGCC TTTTCACGCCTGGCA TERM 3595 4529750 - 4529735 - g 75 -4.6 -4.60797 | opp_overlap 4529734 GTCGCAGATACAAAA GCTGGT GCAG ACCGGC GATTTCCCCAGGCCT Daci_4137 4529541 - 4529915 + | phage transcriptional regulator, AlpA Daci_4138 4531123 - 4529912 - | integrase family protein TERM 3596 4532725 - 4532698 - g 72 -3.3 -4.56597 | overlap 4532699 4532713 TTGGTGCCTGAAAAA CCCTCTGAGCG AGAACA CGCTCAATGGC GCGCTCAAGCGTATG Daci_4139 4531718 - 4533646 + | integrase family protein TERM 3597 4534007 - 4534028 + F 72 -2.1 -4.77165 | overlap 4533995 GCGCAAGCGTCACTG TCGAGCCGC GACA GACGCTCGG TTTTCTTGTGCCCGA TERM 3598 4534243 - 4534228 - g 86 -4 -5.22006 | opp_overlap 4534239 GCACGAGAACAAAAA TGATGC ACCA ACATCA AAGGTGTTCTACCGC Daci_4140 4534211 - 4534966 + | hypothetical protein Daci_4141 4535085 - 4535297 + | phage transcriptional regulator, AlpA Daci_4142 4535340 - 4536215 + | cobyrinic acid ac-diamide synthase Daci_4143 4536199 - 4536447 + | hypothetical protein Daci_4144 4536440 - 4538032 + | hypothetical protein Daci_4145 4538048 - 4538608 + | hypothetical protein Daci_4146 4538612 - 4539856 + | hypothetical protein TERM 3599 4540764 - 4540746 - g 70 -8.8 -3.90744 | TTTCGTGTCAAAGAA CGCCGC AGCACGG GCGGCG TTGGAGAAATTCGGC Daci_4147 4540174 - 4540974 + | hypothetical protein TERM 3600 4541225 - 4541237 + G 75 -4.7 -4.62069 | opp_overlap 4541221 CCAGCAGACCACGGG CGCAG GCA CGGCG TTTTTGCGCTGGCGC Daci_4148 4540971 - 4541498 + | putative integrase regulator R protein Daci_4149 4541572 - 4542012 + | single-strand DNA-binding protein Daci_4150 4542282 - 4544294 + | DNA topoisomerase III Daci_4151 4544818 - 4545063 + | hypothetical protein TERM 3601 4545092 - 4545108 + F 85 -9.4 -4.64844 | CGCCCCCCCTGACAG CCCGCA CTCGA TGCGGG TTTTCTGTCTCTGCG TERM 3602 4545301 - 4545321 + F 74 -3.1 -4.82901 | overlap 4545300 CAAGTCTGCGGACAC GCGTCCCCG TGA CGCCGATGC TTTTTATCCACCGCG Daci_4152 4545393 - 4545605 + | hypothetical protein Daci_4153 4545627 - 4546019 + | hypothetical protein TERM 3603 4546056 - 4546091 + F 80 -9.8 -4.10672 | gap 1, overlap 4546057 GTCTTTTCGTTCCCC ACGAGGGACATGCGC CCACACA GC-CATGTCCCTCGA TTTCCTTTCCGTTGC TERM 3604 4546057 - 4546090 + F 76 -13.3 -3.0568 | gap 1, overlap 4546056 TCTTTTCGTTCCCCA CGAGGGACATGCGC CCACACA GC-CATGTCCCTCG ATTTCCTTTCCGTTG TERM 3605 4546176 - 4546209 + F 80 -11.7 -3.70773 | opp_overlap 4546175, overlap 4546177 CCCCTTTCAACCCAC CGGGTCCAATTCCCG GTGG CGGGAATTGGCTCCA TTATTCAATCTGGAG TERM 3606 4546177 - 4546208 + F 77 -15.2 -2.82142 | opp_overlap 4546175, overlap 4546176 CCCTTTCAACCCACC GGGTCCAATTCCCG GTGG CGGGAATTGGCTCC ATTATTCAATCTGGA TERM 3607 4546704 - 4546714 + G 86 -2.4 -5.1356 | overlap 4546700 TGGCGGACCTTGCCA CGCC GGA GGCC TTTTTGTTCATCGCC Daci_4154 4546232 - 4546969 + | hypothetical protein Daci_4155 4547064 - 4547342 + | hypothetical protein TERM 3608 4547503 - 4547530 + F 74 -5.4 -4.55295 | overlap 4547506 4547509 CCAAGACCTTCAAGG CTGCAAGCGCGG GAAA CCGTGCTGGTTG TTTCTTTCTACGGAC TERM 3609 4547506 - 4547527 + F 77 -7.9 -4.38748 | overlap 4547503 4547509 AGACCTTCAAGGCTG CAAGCGCGG GAAA CCGTGCTGG TTGTTTCTTTCTACG Daci_4156 4547623 - 4548435 + | hypothetical protein TERM 3610 4548470 - 4548497 + F 100 -13.4 -5.26316 | CGACATGCCCCCACA GGCTCTCCCTCC ATTC GGAAGGAGGGCC TTTTTTCTGCCGTGG Daci_4157 4548814 - 4549728 + | hypothetical protein TERM 3611 4549730 - 4549759 + F 90 -14.9 -3.54297 | overlap 4549731 CTGCTTCGTTCTGAT CCGGCATGGCCCC TCAT GGGGCCTTGCCGC TTCTCCTTGCTGCAT TERM 3612 4549731 - 4549758 + F 86 -18.4 -2.72096 | overlap 4549730 TGCTTCGTTCTGATC CGGCATGGCCCC TCAT GGGGCCTTGCCG CTTCTCCTTGCTGCA TERM 3613 4549827 - 4549850 + F 86 -13.8 -3.44553 | TTCTTCCCCCGAGTT CCGCGTGGTC AGAC GGCCGCGCGG TTGTCGCATTTTTCA Daci_4158 4549879 - 4550706 + | hypothetical protein TERM 3614 4550714 - 4550742 + F 91 -13.2 -3.86202 | AGGCGTGATGCCAAG TGGACCTTGCCC ACCTC GGGCGAGGTTCA TTTCCTCTCATCCAC Daci_4159 4550802 - 4551500 + | hypothetical protein TERM 3615 4551538 - 4551571 + F 70 -13.1 -2.83903 | overlap 4551533 4551545 GTGCTTCATCCACCC GCCGGGGGTCTTCCC CACC GGGGAGGCTTCTGGC TCAATTTTTCCAGGA Daci_4160 4551595 - 4552002 + | hypothetical protein Daci_4161 4552056 - 4553858 + | helicase domain-containing protein TERM 3616 4553872 - 4553891 + F 77 -7.8 -4.34263 | overlap 4553871 4553870 AATTTCCACGCCATC GCCGGC CTAGCGCC GCCGGC TTTCTGTTCTTCCCA TERM 3617 4553907 - 4553951 + F 73 -10.5 -3.67417 | overlap 4553910 TTTCTGTTCTTCCCA CCTTGCAGCCACGTCCCGCAG TCT CCGCAGGACGTGGCTGCGTCC TTTCAGATTCAGTGT TERM 3618 4553910 - 4553948 + F 100 -21 -2.94412 | overlap 4553907 CTGTTCTTCCCACCT TGCAGCCACGTCCCGCAG TCT CCGCAGGACGTGGCTGCG TCCTTTCAGATTCAG TERM 3619 4554398 - 4554414 + G 78 -5.7 -4.58395 | overlap 4554363 4554401 ATGCGTCAGACGTGT CGGCCGC GCT GCGGGTG TTTTTCGAGGGTCGC Daci_4162 4554031 - 4555833 + | ATP-dependent endonuclease family protein Daci_4163 4555899 - 4557551 + | UvrD/REP helicase Daci_4164 4557694 - 4558272 + | putative secreted protein Daci_4165 4558269 - 4558910 + | hypothetical protein TERM 3620 4559349 - 4559339 - g 76 -2.4 -4.72272 | overlap 4559340 4559341 CTGCCTGACGAAAAA CCCG GCG CCGG CACAAGCGCCAATCC Daci_4166 4558925 - 4559662 + | putative secreted protein TERM 3621 4559838 - 4559825 - g 71 -9.5 -3.72576 | TGGCTTTGCAGGAAA GCGGC ATCC GCCGC AACGGGCGCATCGTC Daci_4167 4559644 - 4560249 + | lytic transglycosylase catalytic Daci_4168 4560246 - 4560794 + | hypothetical protein TERM 3622 4560858 - 4560879 + G 79 -10.8 -4.07124 | GGAGTTCTATACCGT CGCGGCGT GTGCAG GCGCCGCG TTTCTGTCCCTGGTG Daci_4169 4560799 - 4562982 + | hypothetical protein TERM 3623 4563556 - 4563569 + G 78 -9.5 -4.12532 | GCCGGTTCGGCGCAG GCCGG GAAT CCGGC TTTATCTATCACCGA Daci_4170 4562979 - 4563740 + | hypothetical protein TERM 3624 4563856 - 4563885 + G 90 -12.1 -4.46212 | gap 1, overlap 4563858 GTTGGCTCCGATCTG GCTG-CGCGCCGCG CAT CGCGGCGTGCCAAC TTTTCTCGTGACGGC Daci_4171 4563839 - 4564222 + | hypothetical protein TERM 3625 4564272 - 4564302 + G 82 -14 -3.70068 | overlap 4564263 4564254 CGGTATCGCGCCGTC CGCGATGGCGACCG TTC TGGTCGGCATCGTG TTTGCGGTTCTGCTC Daci_4172 4564219 - 4564452 + | hypothetical protein Daci_4173 4564469 - 4564828 + | hypothetical protein Daci_4174 4564842 - 4565252 + | hypothetical protein Daci_4175 4565249 - 4565941 + | putative secreted protein TERM 3626 4566432 - 4566443 + G 72 -5.8 -4.25104 | AACGCCAATCCCCGT CGTG CTGA CACG TTTTGCTGCGCAGAA Daci_4176 4565938 - 4566876 + | putative signal peptide Daci_4177 4566866 - 4568275 + | putative secreted protein TERM 3627 4568368 - 4568345 - g 70 -3.8 -4.46615 | gap 1, overlap 4568346 4568347 CACCAGCAAGGAAAA GCTGCTGACCC ACG GAGACAGCA-C GATGATGAACATCTG Daci_4178 4568256 - 4568705 + | putative signal peptide TERM 3628 4569394 - 4569364 - g 73 -7.5 -4.19238 | gap 1, overlap 4569367 CGGCCAAGGGCAAAA CAGCCGCCGCGGGC AGAC GCCCG-AGCAGATG CTCAATATCGTTTGC Daci_4179 4568705 - 4571614 + | hypothetical protein TERM 3629 4572010 - 4572046 + G 79 -10.8 -4.08064 | gap 1, overlap 4572042 TGCCGAGGCACGCCT GGCCGAGTGCGCCGCCG AAAG TGGCGG-GCATGTGGCC TTTTGGCAGGCCATT TERM 3630 4572383 - 4572360 - g 71 -9.6 -3.68827 | gap 1 CACCCACTACGGAAA TGCCTGCCGAC GTC GTCGGC-GACA TGCCCAGGTAGCCCG Daci_4180 4571657 - 4572394 + | hypothetical protein Daci_4181 4572573 - 4573067 + | DNA repair protein RadC TERM 3631 4573093 - 4573112 + F 100 -12.8 -5.08824 | opp_overlap 4573093 GGTTCACTGATCACA GCGGGGGC TTCG GCCTCCGC TTTTTTCCATGCGGC Daci_4182 4573232 - 4573678 + | hypothetical protein Daci_4183 4573675 - 4574622 + | hypothetical protein Daci_4184 4574633 - 4576039 + | hypothetical protein TERM 3632 4576103 - 4576156 + G 81 -4.3 -4.91109 | overlap 4576141 GCGCGGCGAAGGCAT TGCTGTGGACGGTGGTGCTCGTCGC CGCT GCCGTGGGCGCCAACATCGTCGGCA TTTTTCTCGTCGGCA Daci_4185 4576036 - 4576407 + | hypothetical protein Daci_4186 4576423 - 4577946 + | hypothetical protein Daci_4187 4578312 - 4577953 - | hypothetical protein Daci_4188 4578798 - 4578340 - | hypothetical protein Daci_4189 4579115 - 4578798 - | AbrB family transcriptional regulator TERM 3633 4580651 - 4580639 - g 72 -4.8 -4.48987 | overlap 4580641 CTCCGAGAACCAAAA CGCT CCGCC AGCG GAAGGTAGTGGCATC Daci_4190 4579413 - 4581266 + | relaxase Daci_4191 4584632 - 4581297 - | cold-shock protein DNA-binding TERM 3634 4582125 - 4582137 + g 86 -3.3 -5.22794 | overlap 4582126 AAGTCTCTTGCGTAT ACTGG CAA CCAGA TTTTTTGCTGATTCT TERM 3635 4583891 - 4583879 - G 77 -3.4 -4.7373 | overlap 4583882 GTATCTCAGCAAAAA GATG CTTTC CATC AAGCCACATTTGCGC TERM 3636 4584558 - 4584569 + g 81 -2.2 -5.03747 | ACCAAACCAATTCAT TTGC TCAA GCAG TTTTTTGGCAAGTTT Daci_4192 4587271 - 4584629 - | chromosome segregation ATPase-like protein TERM 3637 4585176 - 4585192 + g 81 -2.3 -5.00884 | opp_overlap 4585170 4585174 4585176, overlap 4585174 ACCGCTAAAGAAGCA TTGATTG CTT CAATGAA TTTTTTGAACGGGCT TERM 3638 4585564 - 4585552 - G 72 -3.3 -4.65263 | ACTCTGCAAAATAAA GCTCA GGG TGTGC CAGATTCATCTCATC TERM 3639 4585841 - 4585808 - G 76 -2.3 -4.75174 | overlap 4585809 TATGGAATTGAAAAA GCCCAGCATGGATTC CTGC GAATCCCAATTAGGC TGGACAGACAGCGGC TERM 3640 4586744 - 4586758 + g 90 -5.6 -5.38054 | GACTTCGCTTTGCAA GGCGGA GAG TGCGCC TTTTTGTTTCTCAAA Daci_4193 4588069 - 4588449 + | hypothetical protein Daci_4194 4592582 - 4589202 - | AAA ATPase TERM 3641 4589671 - 4589694 + g 71 -2.2 -4.56729 | ACAGTGACTTCTGCG GGGCGCGTCC AACT GGTTCCGTCC TTTTGATGTTTTCCT TERM 3642 4589859 - 4589847 - G 70 -9.1 -3.92075 | ATTTCTACTGATAAA GCTGC CCA GCAGC GGATGCATGCGGTAT TERM 3643 4590369 - 4590384 + g 79 -4.6 -4.77759 | overlap 4590370 AGATTTTTTATCCTT AGCCGA ATAC TCGGCG TTTTTGATGCGTTGT TERM 3644 4590528 - 4590516 - G 75 -4.8 -4.57073 | opp_overlap 4590514 4590516 CAGGTTGTCCAAAAA TGGC GCTGG GCCA TCTTCATTGCGCCAC TERM 3645 4590710 - 4590723 + g 71 -2.3 -4.58283 | overlap 4590711 CATCGTTGAGGTTTT CCTCG TGCG CGAGC TTTTTCGCCAAATTC TERM 3646 4591182 - 4591195 + g 75 -4.5 -4.56775 | opp_overlap 4591182, overlap 4591170 CGGGCCTTGGATCAA CGCTA TATC TGGCG TTTTTAGGGCGGCCT TERM 3647 4591206 - 4591218 + g 72 -6.2 -4.2828 | TGGCGTTTTTAGGGC GGCC TCGAT GGCC TTTTCCTGCATGACG TERM 3648 4591529 - 4591541 + g 78 -6.2 -4.57341 | overlap 4591535 AATAGGTATTTTTCT CGCG CAGCT CGCG TTTTTCACCGAGCTT TERM 3649 4592318 - 4592308 - G 82 -3.2 -5.00884 | overlap 4592309 ACGCCGGTGAAAAAA CCGA TCT TCAG CTCGATGCTGCCATC Daci_4195 4593922 - 4592579 - | serine/threonine protein kinase TERM 3650 4592735 - 4592725 - G 83 -8.2 -4.61527 | AAAACGGGTGAAAAA GCCG CTG CGGC AATCTGAACTCCGTG TERM 3651 4593739 - 4593752 + g 79 -3.1 -4.84359 | gap 1 CGTGCTGGAAGCGCT CGCGCA GAT TG-GCG TTTTTGTCCGGCTGG Daci_4196 4594631 - 4593915 - | hypothetical protein Daci_4197 4595116 - 4594628 - | hypothetical protein TERM 3652 4595000 - 4594987 - G 75 -9.5 -4.05446 | opp_overlap 4594987 TGCTCCAAGCACAAA GGCGG ATTT CCGCC TTTCCATACCCTTGC Daci_4198 4596195 - 4595113 - | hypothetical protein TERM 3653 4596544 - 4596564 + r 85 -6.7 -4.85782 | TAAACGGATCCTTGC GTTGCAGCC CAG GGCGGCGGC TTTCTTTTTCAGCCA Daci_4199 4599557 - 4596873 - | cell divisionFtsK/SpoIIIE TERM 3654 4596911 - 4596925 + g 79 -2.1 -4.87803 | ATGGCCGGAACCATG TGATG TCATT CGTCA TTTTGTTTACGAATA TERM 3655 4597128 - 4597110 - G 71 -3 -4.56642 | opp_overlap 4597127 AAAAATAAATACAAA CGTCCC CTTTCTT GGGCCG TCCTCGGCGAGACGC Daci_4200 4599823 - 4599545 - | hypothetical protein Daci_4201 4601419 - 4600109 - | hypothetical protein Daci_4202 4601705 - 4601436 - | hypothetical protein Daci_4203 4602439 - 4601705 - | von Willebrand factor type A Daci_4204 4605525 - 4602520 - | type III restriction protein res subunit TERM 3656 4604442 - 4604425 - G 72 -3.3 -4.58395 | overlap 4604427 GCCAGGTTGCAAAAA CACCTCG CCAC CGGGGTA GCGCAGCTCCATGAA Daci_4205 4607522 - 4605537 - | DNA methylase N-4/N-6 domain-containing protein TERM 3657 4606394 - 4606412 + g 89 -2.3 -5.30686 | overlap 4606395 4606397 TGCTGGTTGGGAGGT CGCCGAG AGTGG CTCGTTG TTTTTTGTAGATATT TERM 3658 4606397 - 4606409 + g 79 -4.8 -4.73105 | overlap 4606395 4606394 TGGTTGGGAGGTCGC CGAG AGTGG CTCG TTGTTTTTTGTAGAT Daci_4206 4608352 - 4607549 - | hypothetical protein TERM 3659 4607591 - 4607626 + g 78 -6.8 -4.54681 | TTCGGCCTGGATGCG CTTGAGCGTCAGGT TCAGTTCT ACCTGGCGCGCCAG TTGTTTTTCCTTGGT TERM 3660 4607695 - 4607716 + g 71 -11.5 -3.63837 | opp_overlap 4607691 GCTCACAATCAGCCA GCGCCTGCC AGCG GGCAGCCGC TTGTTCCGGGGTTGT Daci_4207 4611582 - 4608349 - | helicase domain-containing protein Daci_4208 4612503 - 4611595 - | hypothetical protein TERM 3661 4612415 - 4612391 - G 72 -6.3 -4.35116 | overlap 4612392 GACTGGATACCAAAA CGCGCGACCAA GTC CTGGCGGCGCA TCTCCCCAATGAAGC Daci_4209 4612783 - 4613673 + | LysR family transcriptional regulator Daci_4210 4614031 - 4613711 - | XRE family transcriptional regulator Daci_4211 4614138 - 4614779 + | LysR family transcriptional regulator Daci_4212 4615154 - 4615417 + | hypothetical protein Daci_4213 4615460 - 4616068 + | ECF subfamily RNA polymerase sigma-24 factor Daci_4214 4616065 - 4616592 + | hypothetical protein TERM 3662 4616833 - 4616857 + G 73 -12.8 -3.53091 | GCTTTGCCGCAGACG GCCTGCCGCC CGAGC GGCGCCAGGC TTTCCGCACAGGACT Daci_4215 4616589 - 4617152 + | putative membrane-associated protein TERM 3663 4618531 - 4618554 + G 73 -16 -2.62263 | opp_overlap 4618528 4618529 CCCGATCCGAAAGCG GCAGCGGCGC ACTC GCGCTGCTGC TGGTCTCGCCCGACT Daci_4216 4617219 - 4618583 + | hypothetical protein Daci_4217 4618589 - 4619812 + | hypothetical protein TERM 3664 4619840 - 4619866 + T 93 -17.3 -3.34962 | gap 1, opp_overlap 4619840 CGCCAACGTGAAAAA GGGCCGG-CGCC TCAA GGCGGCCGGCCC TTGTGCCATGTGCGC TERM 3665 4619866 - 4619840 - T 100 -17.3 -4.66833 | gap 1, opp_overlap 4619840 CGCCAACGTGAAAAA GGGCCGG-CGCC TCAA GGCGGCCGGCCC TTGTGCCATGTGCGC Daci_4218 4620241 - 4619912 - | hypothetical protein Daci_4219 4621934 - 4620951 - | hypothetical protein Daci_4220 4622341 - 4621955 - | hypothetical protein TERM 3666 4622328 - 4622310 - G 70 -8.9 -3.85698 | overlap 4622313 4622317 GTGGGTCTTGAGAAA CAAGCCA GGCCA TGGCTTG CGGCCGCCCGCATAC Daci_4221 4622382 - 4623527 + | hypothetical protein TERM 3667 4623959 - 4623991 + G 77 -15.5 -3.21218 | overlap 4623960 CGGCTGCGCGCCGCC CGTGCCGCCATCGAC GAG GCCGGTGGCGGCACC TTGCTGGTCGGGCGT TERM 3668 4623960 - 4623990 + G 79 -19 -2.52516 | overlap 4623959 GGCTGCGCGCCGCCC GTGCCGCCATCGAC GAG GCCGGTGGCGGCAC CTTGCTGGTCGGGCG TERM 3669 4624224 - 4624270 + G 77 -10.7 -3.91897 | gap 1, overlap 4624252 AGGCCATGGGCGTGC GCCGCATCAGCGTGGGCGGCGC ACTG GCGC-GCGCAGCCTGGGGCGGC TTTCTGCATGCGGCG Daci_4222 4623548 - 4624375 + | hypothetical protein Daci_4223 4625083 - 4625277 + | hypothetical protein TERM 3670 4626018 - 4625989 - g 100 -10.7 -4.79955 | gap 1 AGATCGAGAAGAAAA GCCGCACCAAC-CG GCG CGTGGTGGTGCAGC TCGCCTGACACCCCC Daci_4224 4625316 - 4626026 + | threonyl/alanyl tRNA synthetase SAD Daci_4225 4626346 - 4626056 - | hypothetical protein TERM 3671 4626641 - 4626596 - H 84 -11.2 -4.0641 | gap 1, overlap 4626553 GGGCAGCCATACAAA GCATCC-ATGGCGACAGACCG CCTGC CGGTCCATGGCCCTCGGATGC CAGCCACCTCACCCG Daci_4226 4626675 - 4627133 + | azurin TERM 3672 4627183 - 4627200 + T 82 -12.7 -3.64915 | overlap 4627164 CCCGCATTCCATACG GCGGCAC TTCG GTGCCGC TTCTCATTTGTGGAG Daci_4227 4627767 - 4627255 - | hypothetical protein Daci_4228 4629091 - 4627754 - | hypothetical protein TERM 3673 4628572 - 4628585 + g 75 -5.9 -4.4078 | overlap 4628571 4628572 TTTCTTCCTCCGTGA CGGCG CTGC CGCTG TTTTCCTTGACGCCC TERM 3674 4628981 - 4628992 + g 71 -2.2 -4.56597 | GGCGCCGGCATCGCC CTCG TCAA TGAG TTTTTGCAGGCGCGC Daci_4229 4629633 - 4629271 - | hypothetical protein Daci_4230 4629767 - 4630273 + | hypothetical protein TERM 3675 4630427 - 4630463 + F 95 -16.5 -3.92869 | overlap 4630433 AAGGCAGCCACCATC CCCCAAGGCCCCGCCCA CGA TGGTCGGGGCCTTTGCG TTTCTCCGTGCATCC TERM 3676 4630433 - 4630457 + F 100 -17.1 -3.89617 | overlap 4630427 GCCACCATCCCCCAA GGCCCCGCCCA CGA TGGTCGGGGCC TTTGCGTTTCTCCGT Daci_4231 4630501 - 4631085 + | isochorismatase hydrolase TERM 3677 4631321 - 4631308 - g 76 -2.3 -4.72272 | overlap 4631310 CCCCGGCAGGAAAAA CTGTC CGAC GTCAG CGAGACGCTGCGCAT Daci_4232 4631233 - 4632120 + | O-methyltransferase involved in polyketide biosynthesis-like protein TERM 3678 4632144 - 4632168 + T 89 -12.1 -4.06419 | opp_overlap 4632145, overlap 4632145 4632147 AGCAGCCGCAATGAA AGATGCCCGGT CAA GCCGGGCATCC TTGTTTCTGGGAACC TERM 3679 4632167 - 4632145 - T 93 -14.9 -3.91084 | opp_overlap 4632144 4632145 4632147 GCAGCCGCAATGAAA GATGCCCGG TCAAG CCGGGCATC CTTGTTTCTGGGAAC TERM 3680 4632145 - 4632167 + T 83 -15.6 -3.0353 | opp_overlap 4632145, overlap 4632144 4632147 GCAGCCGCAATGAAA GATGCCCGGT CAA GCCGGGCATC CTTGTTTCTGGGAAC TERM 3681 4632147 - 4632165 + T 72 -12.4 -3.07135 | opp_overlap 4632145, overlap 4632145 4632144 AGCCGCAATGAAAGA TGCCCGGT CAA GCCGGGCA TCCTTGTTTCTGGGA Daci_4233 4632817 - 4632188 - | nitroreductase Daci_4234 4633317 - 4632814 - | ferric uptake regulator family protein TERM 3682 4633122 - 4633078 - G 76 -14.1 -3.53012 | overlap 4633079 CTTGCCGCTTTCAAA GGTCTGGCGCAGCAGCAGGCC TGC GGCCTCCAGCTGCGACAGCAC GCGGTAGACGGTGGC TERM 3683 4633122 - 4633079 - G 74 -16 -2.71712 | gap 1, overlap 4633078 TTGCCGCTTTCAAAG GT-CTGGCGCAGCAGCAGGCC TGC GGCCTCCAGCTGCGACAGCAC GCGGTAGACGGTGGC Daci_4235 4633943 - 4633314 - | hypothetical protein Daci_4236 4635254 - 4634223 - | cytochrome c class I Daci_4237 4636060 - 4635272 - | cytochrome c class I TERM 3684 4635326 - 4635380 + g 72 -8.5 -4.08692 | GGTGCTGGAGCTGGT GC-CATGCAGGCGGGCGTAGTAGGCCG CCA CGGCCTGG-ATGTCCGCGGGCGTGAGC TTTTGCGCGACCTTG TERM 3685 4635411 - 4635431 + g 78 -14 -3.61398 | CCCATGAGGCCCAGC GGGCCAGC CTCGC GCTGGCCC TTGTTCCAGGCGGCG Daci_4238 4637774 - 4636230 - | histidine kinase Daci_4239 4638433 - 4637771 - | two component transcriptional regulator TERM 3686 4638442 - 4638469 + H 72 -12.6 -2.99471 | CATGCATGTTGTTGT CCGCAGGGCCTG GCGC CAGGCCCCGCCG TCTGTATCCAAGTCG TERM 3687 4638765 - 4638738 - H 89 -4.8 -5.1963 | overlap 4638739 GGCAACTAAGAAAAA TCCTGGAAGATT TCAG AATCCTCCCGGC GATTTACTGCAGTAG TERM 3688 4639063 - 4639075 + H 76 -6.3 -4.68103 | opp_overlap 4639072, overlap 4639073 AGTTCTGACCCTCGA TCCAT GAG ATGGA TTTTCTTGCGATTGC TERM 3689 4639073 - 4639099 + H 79 -8.9 -4.25104 | gap 1, opp_overlap 4639072, overlap 4639063 CTCGATCCATGAGAT GGATTTTCTTGC GATT GCA-GAAAATCC TTTTCCTGCGAGCGC Daci_4240 4639241 - 4640239 + | redoxin domain-containing protein Daci_4241 4640236 - 4641042 + | disulfide isomerase/thiol-disulfide oxidase Daci_4242 4641054 - 4641455 + | hypothetical protein Daci_4243 4641904 - 4641440 - | hypothetical protein Daci_4244 4642238 - 4643083 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein Daci_4245 4643100 - 4644143 + | polysulphide reductase NrfD TERM 3690 4646087 - 4646071 - g 75 -5.8 -4.4648 | gap 1 AGCCCTACGAGAAAA GCGC-GG AATT CCAGCGC AAGCGCGAGGGCCAG Daci_4246 4644222 - 4647422 + | molydopterin dinucleotide-binding region Daci_4247 4648877 - 4647423 - | RND efflux system outer membrane lipoprotein TERM 3691 4648392 - 4648359 - G 72 -15.2 -2.88544 | GCGCAGGCCCACATA GGCCTGGGCCGTGG TGGCGG CCACGGCCAGGGCC ACGGCGTCGCGGTCG TERM 3692 4648408 - 4648440 + g 73 -7.6 -4.11216 | gap 1, overlap 4648410 ACGGCGTCGCGGTCG GCCTCGCTGGCCTGC AGGC GCAGGGCGGCG-GCC TTTTCCAGGTGGGCG Daci_4248 4650067 - 4648874 - | secretion protein HlyD family protein Daci_4249 4651872 - 4650097 - | major facilitator transporter TERM 3693 4651762 - 4651777 + g 78 -8.2 -4.35461 | overlap 4651759 CGGCATGGACGGCGA GCCCGG CAGG CTGGGC TTTTCATGCTCTTCC Daci_4250 4652464 - 4651874 - | TetR family transcriptional regulator TERM 3694 4652400 - 4652357 - G 90 -13.8 -4.08767 | gap 1, overlap 4652359 GCCATGCTCGGAAAA CACGGCATCGGCCGCGTCCAG CAA CTGGGCGCGGCGGATATCG-G CACTGGGTCTTTTGG TERM 3695 4652399 - 4652359 - G 93 -17.5 -3.6422 | overlap 4652357 CATGCTCGGAAAACA CGGCATCGGCCGCGTCCAG CAA CTGGGCGCGGCGGATATCG GCACTGGGTCTTTTG TERM 3696 4652463 - 4652422 - G 79 -18.9 -2.52464 | opp_overlap 4652435, overlap 4652431 4652457 GTCTTTTGGAAGTCA TGCGGACAATTATCGGACA AAGT TGTCCGTTAAATGTCCGCA ACCGGCCTATCCCAT Daci_4251 4653446 - 4652529 - | pseudouridine synthase Daci_4252 4653875 - 4653459 - | hypothetical protein Daci_4253 4654099 - 4653872 - | hypothetical protein Daci_4254 4654919 - 4654164 - | GntR family transcriptional regulator Daci_4255 4655058 - 4655852 + | short-chain dehydrogenase/reductase SDR Daci_4256 4655907 - 4656839 + | hypothetical protein Daci_4257 4656951 - 4658285 + | major facilitator transporter TERM 3697 4658497 - 4658523 + G 70 -3.4 -4.39002 | overlap 4658498 4658499 CAGCACCCCACCGCC CAGCCCGCCGCC GCT GGCTGCGCGCCC TTTTGTGGACGGTTT TERM 3698 4658685 - 4658716 + G 74 -15.2 -3.05463 | gap 1 CGCCTGCGCTGGACC TGGCCCCAGCCCCTG GAC CAGGG-CTGGCGCCA TTGGGTCCCGGGCGT Daci_4258 4658334 - 4660709 + | AsmA family protein TERM 3699 4660725 - 4660742 + F 72 -14.1 -2.52464 | ACGCGTGGCCAGGAT GCGCGGC AAGC GCCGCGC TGCATTGGCGCAAAA Daci_4259 4661008 - 4661424 + | ModE family transcriptional regulator Daci_4260 4661421 - 4661921 + | hypothetical protein Daci_4261 4665337 - 4661951 - | DNA polymerase III, alpha subunit TERM 3700 4663210 - 4663241 + g 75 -10.1 -4.07568 | opp_overlap 4663198 AGATGGGCACGCCCA GCGTGCGCTTGAG CGCCTT CTCGAGCGCGGGC TTTTCCAGGACCAGC TERM 3701 4664006 - 4664038 + g 84 -7.6 -4.76041 | overlap 4664008 GCGCCAGCAGCTGAC CACGGCCGTCAGCG CCGCA CGGTCACGGCCGTA TTTTTCGTAGATGTA TERM 3702 4664008 - 4664036 + g 75 -10.2 -3.99327 | overlap 4664006 GCCAGCAGCTGACCA CGGCCGTCAGCG CCGCA CGGTCACGGCCG TATTTTTCGTAGATG Daci_4262 4666838 - 4665330 - | hypothetical protein Daci_4263 4667729 - 4666845 - | hypothetical protein TERM 3703 4667815 - 4667800 - R 100 -11.8 -5.09895 | opp_overlap 4667800 CACGGATGTAAAAAA GCCGGG CAAG CCCGGC TGTCTCAGTGCGCTG Daci_4264 4669184 - 4667820 - | metal dependent phosphohydrolase TERM 3704 4668408 - 4668390 - G 74 -12.4 -3.62522 | GAATTTGTCGAAGAA GGCCGAGA CCA CCTCGGCC AGCAACAGGATACGG TERM 3705 4669245 - 4669225 - R 100 -14 -4.58724 | opp_overlap 4669225 4669227, overlap 4669227 GAAATATAAGCAAAA GAGCCCGC GCAAG GCGGGCTC TCGTTGCGCAGGCCA TERM 3706 4669225 - 4669245 + r 73 -14 -2.70932 | opp_overlap 4669225 4669227, overlap 4669227 GAAATATAAGCAAAA GAGCCCGC GCAAG GCGGGCTC TCGTTGCGCAGGCCA TERM 3707 4669258 - 4669227 - R 86 -12.2 -3.87807 | opp_overlap 4669225 4669227, overlap 4669225 AATATAAGCAAAAGA GCCCGCGCAAGGCG GGCT CTCGTTGCGCAGGC CAGCCAAGGCAGGCC Daci_4265 4669925 - 4669287 - | 3-oxoacid CoA-transferase, B subunit TERM 3708 4669929 - 4669939 + r 77 -3.2 -5.01497 | GGTCCACGGCATGGT CAGG CTC CTTG TTTTTCTGTGATGGT Daci_4266 4670635 - 4669928 - | 3-oxoacid CoA-transferase, A subunit TERM 3709 4670604 - 4670627 + g 71 -3.1 -4.59109 | gap 1 ACGACGCCCTGGAGC GC-CTGCTCC GCGGA GGGGTAGAGC TTTTTCACACATGTC TERM 3710 4670887 - 4670907 + G 74 -14 -3.28712 | ACGAGTACGAGCGGC TGGGCGCG CGCAT CGCGCCCA TTCTCAACGCCCGGG Daci_4267 4670709 - 4671251 + | LuxR family transcriptional regulator TERM 3711 4671331 - 4671310 - f 95 -10.9 -4.56775 | gap 1, overlap 4671296 ATGCCTTGGCAAAAA GCATGC-CCG GCA CGGCGCATGC GGGTGGCGGTGAAAT Daci_4268 4671516 - 4672967 + | catalase TERM 3712 4673011 - 4672990 - T 95 -14.4 -4.13945 | opp_overlap 4672990 ATGCCCACGGCAAAA CGCCCCCG CATCGC CGGGGGCG TTTTTCATGGCGCGC TERM 3713 4672990 - 4673011 + T 100 -14.4 -4.72272 | opp_overlap 4672990 ATGCCCACGGCAAAA CGCCCCCG CATCGC CGGGGGCG TTTTTCATGGCGCGC Daci_4269 4673474 - 4673034 - | hypothetical protein Daci_4270 4675543 - 4673522 - | NADH:flavin oxidoreductase/NADH oxidase TERM 3714 4675675 - 4675693 + H 70 -4.5 -4.45068 | opp_overlap 4675674 GCAGGCCCGTAAGAT GGCGC CCAGCTCCA GCGCC TTTCTTGTTGCCGAT TERM 3715 4676059 - 4676110 + G 88 -15 -3.72576 | opp_overlap 4676046 AAGTGCAGCGGCTGC TGGCACTGCACCAGGCGCAGCTGG ACGT CTACCAGCGCCTGGAGCAGCGCGA TTTCCTGGACAAGCC Daci_4271 4675707 - 4676246 + | PadR-like family transcriptional regulator TERM 3716 4676279 - 4676309 + T 73 -13.2 -2.77013 | opp_overlap 4676288, overlap 4676278 TGAGACTGCCGAGAC GGCTGAGAAGGTCG CGA CGGCCGCCTCAGCC CTTGTTCAAGCCGTG Daci_4272 4677227 - 4676304 - | SMP-30/gluconolaconase/LRE domain-containing protein TERM 3717 4676880 - 4676922 + g 77 -11.8 -3.8512 | opp_overlap 4676880, overlap 4676881 GCGCCGCTGCAGATA GGGGCTGATGCGCCCCGTGG CCA CCTCCAGGCGCATCAGGCCG TTCTTGTAGTCGGTG TERM 3718 4676881 - 4676921 + g 72 -15.3 -2.9059 | opp_overlap 4676880, overlap 4676880 CGCCGCTGCAGATAG GGGCTGATGCGCCCCGTGG CCA CCTCCAGGCGCATCAGGCC GTTCTTGTAGTCGGT Daci_4273 4678140 - 4677250 - | amidohydrolase 2 Daci_4274 4679101 - 4678145 - | hypothetical protein TERM 3719 4679075 - 4679036 - G 93 -17 -3.53811 | overlap 4679037 GGGACGCTCGGGAAA GGCGGCCTGGGCCACGGC GGCG GCCAGGGCGCAGGCCGCG ATCAGGGTTCCGGCA TERM 3720 4679074 - 4679037 - G 83 -20.5 -2.72144 | overlap 4679036 GGACGCTCGGGAAAG GCGGCCTGGGCCACGGC GGCG GCCAGGGCGCAGGCCGC GATCAGGGTTCCGGC Daci_4275 4680144 - 4679140 - | hypothetical protein TERM 3721 4679998 - 4679965 - G 78 -13.7 -3.53811 | overlap 4679930 4679929 CGCATGGTCGGCAAA GGCGCGCGCCACCAC GTCG GTGGGGCCGCCCGCC GCAAAGCCCACGACC Daci_4276 4681147 - 4680215 - | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding TERM 3722 4680860 - 4680905 + g 82 -16.7 -3.38768 | gap 1, overlap 4680895 GGCCGCCGCGTTGGC GCCGGCCGCAGCC-ACCACGGC AAT GCCGCGTTCGGCGGCGGCCGCC TTGTCGATGGTGTCC Daci_4277 4681830 - 4681144 - | dimethylmenaquinone methyltransferase Daci_4278 4682877 - 4681879 - | hypothetical protein TERM 3723 4682410 - 4682389 - G 74 -12.3 -3.64703 | gap 1 GCCGCCCGAGGCAAA GGC-CAGCCG GCC CGGCTGCGCC TTGGCGGCGGCCAGC Daci_4279 4683809 - 4682874 - | amidohydrolase 2 Daci_4280 4684894 - 4683893 - | hypothetical protein TERM 3724 4684913 - 4684954 + H 82 -11 -3.8709 | GGTTTGTCTCCGTTT GTTGTGTCCAACGC-CCGCA TGTC TGCGGTGCGTGGGACG-AAC TTTATGAAAACGTTT TERM 3725 4685497 - 4685519 + G 72 -8.4 -4.07568 | CGCTGGACCAGGGCT CGCCAGGG CGCGTGA TCCTGGCG TTTTCAGGCGAGCCG Daci_4281 4685010 - 4685810 + | IclR family transcriptional regulator TERM 3726 4685839 - 4685816 - T 72 -13.9 -2.62616 | opp_overlap 4685806 GCATCCCTGAGACCA CCTTCCGGG GCGACG CCCGGAAGG TGGATGGCCGCTTAC Daci_4282 4687404 - 4685851 - | hypothetical protein TERM 3727 4687374 - 4687388 + g 81 -3.4 -4.92757 | overlap 4687376 CGGCCAATGCCACGG CAGCGG CCA CTGCGG TTTTCTTGTTGCTCA TERM 3728 4687612 - 4687632 + r 100 -9.6 -5.1848 | CGCCCATGGAATTGC CCAGGCGC GACAG GCGCCCGG TTTTTTCAATTGCTT Daci_4283 4688738 - 4687836 - | alpha/beta hydrolase fold TERM 3729 4689178 - 4689210 + G 74 -12 -3.53563 | gap 2 TGCACGCTGGGCTTT GGCCGCCAGCGGCTGG CGC CC-G-CGCTGTCGGCC TTTGCCCGCGCCTAT Daci_4284 4688872 - 4689798 + | LysR family transcriptional regulator TERM 3730 4690035 - 4690062 + G 75 -4.6 -4.62069 | overlap 4690036 CGTCTTCCTGGCCTT TGCGCGCCGCCC GGCC GAATGGCGCGCC TTTTTCGCCTACCAC Daci_4285 4689877 - 4690500 + | uncharacterized peroxidase-related enzyme Daci_4286 4691962 - 4690469 - | transcriptional regulator Daci_4287 4692059 - 4692853 + | N-acetyltransferase Daci_4288 4693862 - 4692858 - | LacI family transcription regulator TERM 3731 4694037 - 4694027 - H 78 -2.4 -5.08824 | opp_overlap 4694027 CTTGCATCTAAAAAA CGGC ATC GGCG CTTTTTCATTCCCCC TERM 3732 4694115 - 4694142 + G 70 -3.3 -4.42386 | gap 1 CATTCTTCGTGCCAT GGCGCTG-GCCC TGGCC GCGCTCACCGCC TTTTCTGCATCGGCC TERM 3733 4694319 - 4694289 - g 74 -11.9 -3.78934 | opp_overlap 4694289 CGTGGTGGAGAACAA GGCCGGCGCC-ACGG GCA CCATCGGCG-CGGCC TTCGTGCAGCGCGCG TERM 3734 4694524 - 4694501 - g 76 -7.4 -4.36914 | gap 1, overlap 4694502 4694503 GCTCGCCGCACAAAA GCGTGGCCGAC GTG GTCGCCCAC-C TCAAGGCCCACCCGG Daci_4289 4694092 - 4695060 + | hypothetical protein Daci_4290 4695104 - 4696261 + | mandelate racemase/muconate lactonizing protein Daci_4291 4696613 - 4697134 + | putative cytoplasmic protein Daci_4292 4697134 - 4697550 + | hypothetical protein Daci_4293 4698944 - 4697598 - | two component, sigma54 specific, Fis family transcriptional regulator Daci_4294 4700821 - 4698941 - | histidine kinase TERM 3735 4699889 - 4699868 - G 95 -13.7 -4.24745 | gap 1, overlap 4699869 CAGCAGCAACACAAA GGCCGC-GCC CAC GGCCGCGGCC AGCGCGCGGCTCTGG Daci_4295 4702340 - 4700868 - | sodium:dicarboxylate symporter Daci_4296 4702558 - 4702683 + | hypothetical protein Daci_4297 4704184 - 4702769 - | methyl-accepting chemotaxis sensory transducer TERM 3736 4704114 - 4704102 - G 78 -6.2 -4.63932 | CAGGGGGCAAGAAAA CGGG AGTCG CCCG ACAGGAGATAGCCTC TERM 3737 4704444 - 4704496 + G 73 -7.7 -4.18367 | gap 3, opp_overlap 4704448 4704451, overlap 4704450 4704451 CCTGGCCGGGATCTA CAAAGCACTCGCGCCAGC-GGCTGCC GGGT GGCGGCCAGCGGGC-CT-GCGCTTTG TTTCTCTATGTAATA TERM 3738 4704450 - 4704492 + G 75 -5.3 -4.66625 | gap 1, opp_overlap 4704448 4704451, overlap 4704444 4704451 CGGGATCTACAAAGC ACTCGCGCCAGC-GGCTGCC GGGT GGCGGCCAGCGGGCCTGCGC TTTGTTTCTCTATGT Daci_4298 4704255 - 4704509 + | hypothetical protein Daci_4299 4704573 - 4705586 + | regulatory protein MerR Daci_4300 4705583 - 4706179 + | Lipocalin family protein TERM 3739 4706314 - 4706282 - g 76 -7 -4.38154 | gap 2 ATATCTTCGAGAAAA GCCGAG-GCCCAT-CG GGG CGCATGAGCACACGGC GCGCGCAGGATCCGC Daci_4301 4706215 - 4707234 + | FAD dependent oxidoreductase TERM 3740 4707932 - 4707907 - g 84 -7.5 -4.70319 | CTACGAAAAGGAAAA GGACGACATCA AGCG CGATGCCGACC GCCTGGAAGCCGAGG Daci_4302 4707536 - 4708144 + | putative transmembrane protein Daci_4303 4708722 - 4708231 - | hypothetical protein TERM 3741 4709244 - 4709232 - g 83 -4.8 -4.87665 | opp_overlap 4709240, overlap 4709240 GGCCATGGAGAAAAA GCTG CAAAC CAGC AAAAAGCAGTTGCAG Daci_4304 4708945 - 4709439 + | MerR family transcriptional regulator Daci_4305 4710160 - 4709465 - | ThiJ/PfpI domain-containing protein Daci_4306 4711083 - 4710157 - | NAD-dependent epimerase/dehydratase TERM 3742 4711215 - 4711195 - R 71 -7.5 -4.19624 | opp_overlap 4711195 4711198, overlap 4711191 CAGGTCGAAGACAAA CCCGCCG GCTCGCT CAGCGGG TGGACTCTTTGGTCG Daci_4307 4712290 - 4711406 - | LysR family transcriptional regulator TERM 3743 4712543 - 4712528 - g 75 -8.2 -4.15565 | overlap 4712531 CCGACCAGCGCAAAA GCACGG CGCA CCGCGC CGAGGCGCTCAACGA Daci_4308 4712410 - 4713384 + | N-acetyl-gamma-glutamyl-phosphate reductase Daci_4309 4714003 - 4713533 - | thioesterase superfamily protein TERM 3744 4714368 - 4714349 - g 75 -10.6 -4.07568 | CGTCGTGCTGGAAAA GGGCTCCG AGCC CGGTGCCC ACATCCTGTCCGGCG TERM 3745 4714457 - 4714436 - g 70 -4.3 -4.42238 | gap 1, overlap 4714437 TGACTGGAAGGAAAA GGGC-GCGCC CCT GACCCAGCCC GTCACCGACGACGCC Daci_4310 4714188 - 4715888 + | electron-transferring-flavoprotein dehydrogenase TERM 3746 4715918 - 4715943 + F 100 -13.3 -5.27335 | overlap 4715922 CGGCCCTCCTCTGAA GCCTGCCCAAG CCTG CTTGTGCAGGC TTTTTCTTTGAGCGC Daci_4311 4716293 - 4717264 + | hypothetical protein TERM 3747 4717313 - 4717343 + F 100 -11.9 -5.49729 | gap 1, opp_overlap 4717333, overlap 4717314 GCAGTGCGCCCACGG TGGCAGGCGCCATG GCAA CATGGC-CCTGCCC TTTTTTTAAGTCGTT TERM 3748 4717314 - 4717342 + F 95 -15.4 -3.8821 | gap 1, opp_overlap 4717333, overlap 4717313 CAGTGCGCCCACGGT GGCAGGCGCCATG GCAA CATGGC-CCTGCC CTTTTTTTAAGTCGT Daci_4312 4717388 - 4718272 + | inner-membrane translocator Daci_4313 4718442 - 4719236 + | ABC transporter related TERM 3749 4719257 - 4719280 + T 90 -18.2 -3.16881 | opp_overlap 4719260, overlap 4719260 CCGCACTTCCGGGAA CAAGGGGCGC TGCG GCGCCCCTTG TTCATGGGATGGCTA TERM 3750 4719260 - 4719277 + T 91 -14.1 -3.7282 | opp_overlap 4719260, overlap 4719257 CACTTCCGGGAACAA GGGGCGC TGCG GCGCCCC TTGTTCATGGGATGG TERM 3751 4719277 - 4719260 - T 88 -14.1 -3.61715 | opp_overlap 4719260 4719257 CACTTCCGGGAACAA GGGGCGC TGCG GCGCCCC TTGTTCATGGGATGG Daci_4314 4719690 - 4719304 - | cupin 2 domain-containing protein Daci_4315 4720579 - 4719767 - | AraC family transcriptional regulator Daci_4316 4722100 - 4720640 - | major facilitator transporter TERM 3752 4721027 - 4721009 - G 78 -16 -3.01416 | overlap 4720988 CACCAGCCAGACATA GCTGCCGC CCA GCGGCAGC GCCCAGGCCATGTAG TERM 3753 4721174 - 4721162 - G 82 -6.9 -4.72272 | CGTGGGCAGCAAAAA GGCCA TGC CGGCC TGCAGCGGGCTCCAG TERM 3754 4721518 - 4721486 - G 80 -16.1 -3.12351 | GCCGGCCAGATCGAA GCCCTGGCCCGGCGC GGC GCGCCCGGTCTGGGC CGAGGGCGGCAGAAA Daci_4317 4722194 - 4723084 + | LysR family transcriptional regulator TERM 3755 4723240 - 4723259 + F 100 -8.5 -5.32396 | GCATGCACCTTGATG GGGCCGC GACACA GCGGCTC TTTTGTTTTTCCTGT TERM 3756 4723288 - 4723315 + F 77 -14.8 -2.78596 | gap 1 GTTTTGCATTCCTGC CCCCGCGCCGGCC AGC GGCCG-CGCGGGA TCTGATCCACCAATC TERM 3757 4724079 - 4724099 + G 100 -13.3 -4.46656 | overlap 4724069 4724067 ACGTGCCCCGCGCCG TGCGCCAGG TGT TCTGGCGCA TTTTGCTGTTCTACG TERM 3758 4724396 - 4724431 + G 78 -6 -4.57073 | gap 1, overlap 4724401 GGCGTGCCCACGATG GCCCTGC-TGGCCACCA CCG TGGTGGCGGCGCTGTGC TTTTTGACCAACATC Daci_4318 4723340 - 4724821 + | amino acid permease-associated region TERM 3759 4724848 - 4724867 + T 86 -15 -3.27704 | opp_overlap 4724848, overlap 4724843 GTCCCCATGAAAAAA CAGCCCGC AGAT GCGGGCTG TTGGCTTTCAGGCAT TERM 3760 4724867 - 4724848 - T 100 -15 -5.14563 | opp_overlap 4724848 4724843 GTCCCCATGAAAAAA CAGCCCGC AGAT GCGGGCTG TTGGCTTTCAGGCAT Daci_4319 4725231 - 4724875 - | glyoxalase/bleomycin resistance protein/dioxygenase TERM 3761 4725315 - 4725301 - R 73 -4.9 -4.64676 | overlap 4725302 GCATCTTGAACAAAA CGGCC AGACG GGCCA CTCAATCCAGCAGTT Daci_4320 4726084 - 4725317 - | AraC family transcriptional regulator Daci_4321 4726545 - 4726090 - | AsnC family transcriptional regulator TERM 3762 4726752 - 4726786 + G 100 -24.4 -3.17075 | opp_overlap 4726741 ACCAGGAGCCCGTTA CAGGCCGCCCCGCT TATCCGC AGCGGGGCGGCCTG TTGCATTGGGGCACC Daci_4322 4726724 - 4728634 + | histidine kinase Daci_4323 4729177 - 4728686 - | hypothetical protein TERM 3763 4728906 - 4728859 - G 71 -9.9 -3.68351 | gap 3, overlap 4728866 CCGCCACCACGCAAA CCAG-GAAGCCGCC-T-GCGCCCA GTC TGGGCGTGACGGCGGCCGCGCTGG CCACATAGATGGCCC TERM 3764 4728895 - 4728866 - G 70 -12.1 -3.33483 | gap 1, overlap 4728859 CACGCAAACCAGGAA GCCGCCTGCGCCCA GTC TGGGCGT-GACGGC GGCCGCGCTGGCCAC Daci_4324 4729276 - 4730205 + | LysR family transcriptional regulator Daci_4325 4731825 - 4730221 - | acyl-CoA synthetase TERM 3765 4731130 - 4731118 - G 75 -4.8 -4.57073 | opp_overlap 4731127 CAGGCGCGGCAAAAA GCTG GTGTG CAGC TCGGCCGTGTGGTTG TERM 3766 4732101 - 4732124 + H 78 -13.8 -3.18264 | opp_overlap 4732091 4732094 CAAAAGGACTGGCAC CGCCTGCCGC CACG GCCGCAGGCG TTCCTAGCTGGAGAG Daci_4326 4732258 - 4733433 + | glycine cleavage system T protein TERM 3767 4733460 - 4733476 + F 78 -5.1 -4.7373 | GCGCTTGGCGTGGAT CGAGTTC GGC GGATTCG TTTTTCCTGCCATCG Daci_4327 4733570 - 4733944 + | glycine cleavage system H protein TERM 3768 4733967 - 4733988 + F 100 -17.3 -4.28049 | opp_overlap 4733941 TTCCGGCCAGGACGG GCGCCAGGG CCCG CCCTGGCGC TTTTCAGCTTTTGAG Daci_4328 4734016 - 4736907 + | glycine dehydrogenase TERM 3769 4736943 - 4736925 - f 82 -13.1 -3.6502 | opp_overlap 4736914 CACCTGCCACCGAAA GGGGCGC TTGTG GCGCCCC GCCTGGCGCGCGTAC TERM 3770 4736966 - 4737020 + F 86 -12.2 -3.87373 | gap 4, overlap 4736967 GCGCGTACACTGCGG CCCTG---CCCGCGCCGGGCG-CCGGTA ATC TGCCGGACGCCGGGCGCGGGCCCCAGGA TTTGTGCGGCATGTG TERM 3771 4736967 - 4737019 + F 81 -15.7 -2.92102 | gap 4, overlap 4736966 CGCGTACACTGCGGC CCTG---CCCGCGCCGGGCG-CCGGTA ATC TGCCGGACGCCGGGCGCGGGCCCCAGG ATTTGTGCGGCATGT TERM 3772 4738243 - 4738221 - g 72 -6.8 -4.24948 | GCAGGAGATCGAAAA GGCCGGCCGC CGC GCGCGCGACC TGGTGCGCCAGATCC Daci_4329 4737031 - 4739280 + | PAS/PAC sensor hybrid histidine kinase Daci_4330 4739286 - 4740023 + | pseudouridine synthase TERM 3773 4740296 - 4740324 + F 76 -6.6 -4.57341 | gap 1, overlap 4740322 ATCTGTGCTTCTTTG CGCGGATCGCCCC TACA GGAGCCA-CCGCG TTTTTCAGAACGCTT Daci_4331 4740364 - 4741485 + | extracellular ligand-binding receptor TERM 3774 4741503 - 4741528 + F 100 -18.3 -3.52896 | overlap 4741522 CCCCTCGTTGACTGG CCGGGGCACGC TTGC GCGTGTCCCGG TTGTCTGCATCCTGG TERM 3775 4741542 - 4741554 + F 84 -9.1 -4.55826 | overlap 4741522 GGTTGTCTGCATCCT GGCCT TTT AGGCC TTTTCCTGTTTTGGG Daci_4332 4741583 - 4742509 + | inner-membrane translocator Daci_4333 4742509 - 4743747 + | leucine/isoleucine/valine transporter permease subunit Daci_4334 4743800 - 4744567 + | leucine/isoleucine/valine transporter ATP-binding subunit Daci_4335 4744567 - 4745277 + | ABC transporter related TERM 3776 4745305 - 4745324 + F 100 -16.4 -5.45802 | GCTTGGCGCTCGACG GGCCCGCC CTTC GGCGGGCC TTTTTCTTTTCACGC Daci_4336 4745445 - 4746356 + | pyridoxal kinase Daci_4337 4746353 - 4747129 + | short-chain dehydrogenase/reductase SDR TERM 3777 4747298 - 4747319 + F 85 -6.6 -4.82154 | opp_overlap 4747297 4747298 4747313, overlap 4747313 CATTCGCTTGAAAAT CGTCATCT GGCAAA GGATGACG TTTTTCATCTGCGTT TERM 3778 4748219 - 4748209 - g 78 -6.8 -4.65933 | opp_overlap 4748209 4748208 GATGCGCAAAAGAAA GTGC GTA GCAC CTTTGATTCCGTGCA Daci_4338 4747390 - 4748418 + | hypothetical protein TERM 3779 4748682 - 4748667 - g 73 -7.5 -4.11216 | GCTGTACCGGCAAAA GCGCG ACTTCA CGCGC ACACCGGAACCTTCG TERM 3780 4748720 - 4748751 + G 100 -21 -4.05446 | gap 1, opp_overlap 4748720 CTTCCAGTGAGACGA TTGCAGGGCAGCCCG GCG CGGGC-GCCCTGCAA TTTGTCATTCAAAAG TERM 3781 4748751 - 4748720 - g 85 -21 -2.64616 | gap 1, opp_overlap 4748720 CTTCCAGTGAGACGA TTGCAGGGCAGCCCG GCG CGGGC-GCCCTGCAA TTTGTCATTCAAAAG Daci_4339 4748560 - 4751175 + | ATP-dependent DNA ligase TERM 3782 4752004 - 4751963 - g 72 -4.3 -4.66264 | gap 1, overlap 4751968 4751970 4751973 CAAAACGTGGAAAAA CAGGA-GACCACACCCGCCG CGC CGGCCAACGCGGCCGTGCTG GACCTGACGGCCCTG TERM 3783 4752097 - 4752082 - g 100 -5.4 -5.64006 | AGCCAAGGAAAAAAA TACCGC GTCA ACGGTA AAAAATGCAAAGACC Daci_4340 4751210 - 4752187 + | Ku protein Daci_4341 4752404 - 4752616 + | bifunctional endo-1,4-beta-xylanase xylA precursor TERM 3784 4752637 - 4752592 - f 71 -5.4 -4.43012 | gap 1, overlap 4752593 AGGGGAACAGCAAAA GCAGGGCA-GCCATCAGCAGC GTTAA GCTGCCGATAGCGTGAACTGG CAAAGGGCCCCCTGG TERM 3785 4752656 - 4752642 - f 82 -12.8 -3.60792 | opp_overlap 4752642 GCGTGAACTGGCAAA GGGCCC CCT GGGCCC TTTTTTTATCTCCAG TERM 3786 4752642 - 4752656 + F 100 -12.8 -5.71712 | opp_overlap 4752642 GCGTGAACTGGCAAA GGGCCC CCT GGGCCC TTTTTTTATCTCCAG TERM 3787 4754848 - 4754814 - g 71 -2.1 -4.59853 | opp_overlap 4754804, overlap 4754803 4754815 CGAAGGCGCCAAAAA GCGCTTCTGGGCC-CGC GAA GCGAAGCTGAGAA-CGC TGGCCTGACCCCCCG Daci_4342 4752769 - 4754856 + | catalase TERM 3788 4755283 - 4755316 + G 82 -8.8 -4.39166 | opp_overlap 4755277 TGTGAACGACCGCAT GCCC-GGCTGGCGCCG CGTG CGGCGC-GGCAAGGGC TTTTCCTATGTGGCA Daci_4343 4754954 - 4756351 + | putative DNA topoisomerase, type I TERM 3789 4757465 - 4757507 + G 71 -10.4 -3.72695 | overlap 4757466 CCATCGAGCTGCCGC CGCTGCGCGAGCGCCTGACC GAC GTTCCGCTGCTTGCGCAGCA TTTCATGGAGGCCAT Daci_4344 4756483 - 4758126 + | two component, sigma54 specific, Fis family transcriptional regulator Daci_4345 4758194 - 4758721 + | hypothetical protein Daci_4346 4758793 - 4759071 + | transglycosylase-associated protein Daci_4347 4760667 - 4759090 - | hypothetical protein TERM 3790 4759733 - 4759718 - G 75 -10.4 -4.07568 | TGGTGCGCCCCAAAA CGCAGC AGTT GCTGCG TGAGGCGGCTGGCCG TERM 3791 4760052 - 4760036 - G 72 -13.7 -3.13432 | GGCAACACCAGGGAA GCGCTGC CCC GCAGCGC CAGCCGCGCCAATCC TERM 3792 4762299 - 4762310 + G 73 -7.2 -4.11216 | opp_overlap 4762291, overlap 4762295 ACAAATACATGGCCA CGCC CACG GGCG TTTTCGAGCTCAAGC Daci_4348 4760996 - 4762558 + | RNA polymerase, sigma 54 subunit, RpoN Daci_4349 4762727 - 4763053 + | hypothetical protein Daci_4350 4763102 - 4763296 + | hypothetical protein Daci_4351 4763298 - 4763498 + | hypothetical protein TERM 3793 4763510 - 4763499 - f 71 -7.2 -4.25859 | overlap 4763496 4763500 TCCAAGTCAAAATAA CCGC GACT GCGG CCAGGCCCGAGACCC TERM 3794 4765330 - 4765354 + G 74 -15.7 -3.01712 | GCAGCCGCTTCACCG TGCGCCTGCCC AGG GGGCATGCGCA TCTTCCGGCCGAGCA Daci_4352 4763547 - 4767410 + | multi-sensor hybrid histidine kinase TERM 3795 4767404 - 4767417 + F 75 -2.3 -5.00616 | GGGCCTGCGCCCCCT GCCGT GAGG ACTGC TTTTTTCGCGCGAGA Daci_4353 4767478 - 4768770 + | allantoate amidohydrolase Daci_4354 4769025 - 4770008 + | hypothetical protein Daci_4355 4770032 - 4770673 + | hypothetical protein TERM 3796 4770724 - 4770707 - T 100 -12.7 -5.1356 | opp_overlap 4770701 GCGCACCAACAAAAA CGGCTCC CGAG GGAGCCG TTGACGTTTCACCCG Daci_4356 4771201 - 4770764 - | UspA domain-containing protein Daci_4357 4772083 - 4771301 - | hypothetical protein Daci_4358 4773379 - 4772204 - | 4-hydroxybenzoate 3-monooxygenase Daci_4359 4773550 - 4774332 + | IclR family transcriptional regulator Daci_4360 4775272 - 4774373 - | LysR family transcriptional regulator Daci_4361 4775476 - 4776483 + | hypothetical protein TERM 3797 4776543 - 4776519 - T 100 -15 -5.1287 | gap 1, opp_overlap 4776519 CGCAGACGCAAAAAA GCCGCCGCGCC GCAA GGC-CGGCGGC TTTTTTCATGCCGTC TERM 3798 4776519 - 4776543 + T 100 -15 -5.15634 | gap 1, opp_overlap 4776519 CGCAGACGCAAAAAA GCCGCCGCGCC GCAA GGC-CGGCGGC TTTTTTCATGCCGTC Daci_4362 4777702 - 4776560 - | alanine racemase domain-containing protein Daci_4363 4778118 - 4777714 - | glutathione-dependent formaldehyde-activating GFA Daci_4364 4778262 - 4778609 + | low molecular weight phosphotyrosine protein phosphatase TERM 3799 4779145 - 4779106 - g 93 -13.5 -4.13014 | GCGAGACCCTCAAAA GCCTGATCCGCCGCCAG GGCGTG CTGACGGCGGCCGAGGC CGGCCGCCTCATGGC TERM 3800 4780277 - 4780254 - g 70 -8.8 -3.85698 | gap 1 GCGCGCTTCGAGAAA GCC-GGCAGCC TGC GCCTGCCCGGC CAGCCCACGGGCATG TERM 3801 4781835 - 4781785 - g 71 -10.9 -3.53811 | overlap 4781786 4781788 CCCAGGTGGTGGAAA GCATCGCGCTGTCGCAGGAGCTG CTGGC CGGCCCCGGCGCCAACGCGGTGG CCGACTACAAGCAGG TERM 3802 4782820 - 4782853 + G 100 -18.1 -4.1891 | GGCCTGAACTGTCCG TGCTCCTGTCCGGGC CTCT GCCCGGCCAGGCGCA TTTATCTTGAACCGA Daci_4365 4778667 - 4782863 + | serine/threonine protein kinase Daci_4366 4782881 - 4783666 + | hypothetical protein TERM 3803 4783733 - 4783777 + G 100 -32.3 -4.59773 | GGCGGCACGTGCCCG GGCGGCAGGTCCGGCAGCTTC CAC GGAACTGCCGGACCTGCCGCC TTTTTCCGACTCCGA Daci_4367 4783704 - 4784507 + | O-methyltransferase involved in polyketide biosynthesis-like protein TERM 3804 4785019 - 4785076 + G 72 -8.2 -4.07568 | gap 1 GCCGGCCAGCGTGCC GCAGGCCGGCCCTGGC-TGCTGGTGCG GCCAG CGGGCGAGCAGGCCATGGCGGGGCCGC TTTTCAAACCCCAGG Daci_4368 4784500 - 4786683 + | hypothetical protein TERM 3805 4787546 - 4787523 - g 86 -6.6 -4.88736 | overlap 4787525 CAGGACGCAGAAAAA GGCCTGGCCC CCGC AAGCCAGGGC TGGATAGAACTGGAT Daci_4369 4786803 - 4787747 + | FHA domain-containing protein Daci_4370 4787935 - 4788282 + | hypothetical protein TERM 3806 4788332 - 4788355 + F 100 -13.9 -5.00616 | CTGTCGCGGCATTGG GGCGCATGC ACAATG GCATGCGCC TTTTTTGCGCCCGAC Daci_4371 4788337 - 4788786 + | glutathione-dependent formaldehyde-activating GFA Daci_4372 4789151 - 4789501 + | hypothetical protein TERM 3807 4790919 - 4790897 - g 75 -9.1 -4.19704 | overlap 4790885 GAAGCCGAGCGAAAA GCTCACCGT CAACT ACGGTGTGC GCTATGACCATGTGA Daci_4373 4789578 - 4791770 + | TonB-dependent receptor Daci_4374 4792063 - 4792656 + | hypothetical protein Daci_4375 4793196 - 4792693 - | GCN5-related N-acetyltransferase TERM 3808 4792748 - 4792735 - G 71 -2.3 -4.64766 | overlap 4792736 GCGATAGCGCAAAAA GCGAG TCCC CTCGA TATCCAATGCGCCAT TERM 3809 4793013 - 4793028 + g 90 -4.6 -5.24129 | overlap 4792998 4793015 GCCCATAGCCGTATT GCTGCC ACTG GGCATC TTTTTTCTGGGCCCA TERM 3810 4793015 - 4793026 + g 72 -5.8 -4.25873 | overlap 4792998 4793013 CCATAGCCGTATTGC TGCC ACTG GGCA TCTTTTTTCTGGGCC TERM 3811 4793233 - 4793218 - R 84 -5.4 -4.89393 | gap 1, opp_overlap 4793218 CAAAGCGTACAAAAA CGGT-GG TTG CCGACCG TGTATCTGAGCGTCA Daci_4376 4793765 - 4793328 - | GCN5-related N-acetyltransferase Daci_4377 4795124 - 4794183 - | LysR family transcriptional regulator TERM 3812 4795055 - 4795045 - G 81 -2.4 -5.03314 | overlap 4795047 GGCATGGCCAAAAAA CGCG ATG CGCC GGCAAAGCTCTGCTC Daci_4378 4795228 - 4796490 + | monooxygenase FAD-binding TERM 3813 4796694 - 4796722 + F 77 -14.5 -2.71364 | CTACCCGCGCTATCA TCAGCCCCGGCCC CCT GTCCCGGGGCTGA TGCTTCAAAACATCC Daci_4379 4796941 - 4797321 + | hypothetical protein Daci_4380 4798657 - 4797371 - | arsenical pump membrane protein Daci_4381 4799249 - 4798734 - | protein tyrosine phosphatase Daci_4382 4799613 - 4799290 - | ArsR family transcriptional regulator Daci_4383 4800484 - 4799780 - | short chain dehydrogenase Daci_4384 4801516 - 4800515 - | alcohol dehydrogenase TERM 3814 4801587 - 4801565 - R 74 -11.3 -3.5415 | overlap 4801563 AGACGAAAAAAACCA GGCACATGC ACAGG GCATGCGCC ATCACTGGCTGGCCG Daci_4385 4802194 - 4801589 - | TetR family transcriptional regulator TERM 3815 4802328 - 4802292 - g 72 -5.1 -4.38927 | overlap 4802295 GCTTCACACAACAAA CCATCCCGCC-CCGTGC TCATT GC-CGGCGGCGGCATCG GTGGCATGGCCACTG Daci_4386 4802250 - 4803575 + | hypothetical protein TERM 3816 4803738 - 4803759 + G 71 -3 -4.56597 | ACCGTGGTGACGCTG GCGATC GTGGGCAGTG GATCGC TTTTTGCGCAGGGCG Daci_4387 4803642 - 4804598 + | extracellular solute-binding protein TERM 3817 4804635 - 4804656 + G 85 -17.3 -3.14602 | overlap 4804629 4804633 CTCCTTTCCGACCAC GGGCCTGCC TTCT GGCAGGCCC TCTTGCTGACCTGGA Daci_4388 4804602 - 4805264 + | polar amino acid ABC transporter, inner membrane subunit TERM 3818 4805374 - 4805385 + G 70 -3.6 -4.4078 | overlap 4805341 4805330 TGCGCTGGCTGCGGG CGTC GTGT GGCG TTTTCATTCCGCAGG TERM 3819 4805436 - 4805452 + G 70 -9.4 -3.85698 | GGGAATTCTTCGCCT GGCCCA CCACC TGGGCC TTTCTGGCCAAGGGC Daci_4389 4805261 - 4806061 + | polar amino acid ABC transporter, inner membrane subunit Daci_4390 4806452 - 4807000 + | hypothetical protein Daci_4391 4807331 - 4808494 + | diguanylate cyclase Daci_4392 4809625 - 4808546 - | glycosyl transferase family protein TERM 3820 4811795 - 4811767 - g 70 -12.4 -3.39289 | overlap 4811759 GAAAACAGGCGACAA GCTGGCCGACAG CACGC CCGTGGGCCAGC CCTTCCAGTACAGCT Daci_4393 4809815 - 4811929 + | metallophosphoesterase TERM 3821 4811952 - 4812000 + F 100 -21.1 -4.29326 | GGCACGGCCTGTACA GCGCTGATCTGTGCCAAGGGGTG CCC TGCCCCTTCGTGCAGGTCAGCGC TTTCTTGCATTTGCG Daci_4394 4812156 - 4812311 + | hypothetical protein TERM 3822 4812378 - 4812420 + F 100 -20.7 -3.50853 | opp_overlap 4812381, overlap 4812381 CGTCCTCCTCTTGCA CAAGCCCCCGCAAGCCCTG CCCGC CAGCGTTTGTGGGGGCTTG TTCTCGTTGGCCCCG TERM 3823 4812381 - 4812417 + F 100 -16.6 -3.8917 | opp_overlap 4812381, overlap 4812378 CCTCCTCTTGCACAA GCCCCCGCAAGCCCTG CCCGC CAGCGTTTGTGGGGGC TTGTTCTCGTTGGCC TERM 3824 4812417 - 4812381 - f 76 -12.2 -3.28712 | opp_overlap 4812381 4812378 CCTCCTCTTGCACAA GCCCCCGCAAGCCCTG CCCGC CAGCGTTTGTGGGGGC TTGTTCTCGTTGGCC Daci_4395 4812560 - 4812961 + | BLUF domain-containing protein Daci_4396 4813022 - 4814806 + | diguanylate cyclase/phosphodiesterase with GAF sensor Daci_4397 4814962 - 4815660 + | hypothetical protein Daci_4398 4815825 - 4816232 + | PRC-barrel domain-containing protein TERM 3825 4816263 - 4816279 + F 100 -13.7 -4.72272 | opp_overlap 4816263 TCGCCTCATTCACAA GCCCTGC ACT GCAGGGC TTTTTCGTGGGCGCG TERM 3826 4816279 - 4816263 - f 81 -13.7 -3.35679 | opp_overlap 4816263 TCGCCTCATTCACAA GCCCTGC ACT GCAGGGC TTTTTCGTGGGCGCG Daci_4399 4816419 - 4816757 + | hypothetical protein Daci_4400 4817695 - 4816760 - | LysR family transcriptional regulator TERM 3827 4817026 - 4817036 + g 79 -2.4 -4.82901 | overlap 4817015 TGAAGGCGTGCCGCC AGGC CAG GCCC TTTTTGTCCAGGGCG TERM 3828 4817346 - 4817376 + g 74 -12.5 -3.54307 | TGCGGGTGGGCCCGC GCGAACTGCCCCA GCACA TGGGGCAGCACGC TTTCGCCCAGGTCTT TERM 3829 4817668 - 4817658 - G 78 -6.8 -4.56775 | overlap 4817659 ACGCCGGTGCAAAAA GTGC GCA GCAC ATCCAGGTCATAGAG Daci_4401 4817762 - 4819147 + | major facilitator transporter Daci_4402 4819144 - 4819782 + | lysine exporter protein LysE/YggA Daci_4403 4820203 - 4819898 - | antibiotic biosynthesis monooxygenase TERM 3830 4820305 - 4820276 - R 86 -17.9 -2.87132 | opp_overlap 4820268 CTCCTGGTTGAGAGA CTGGATGCGCGCA GGGC TGCGCGCATCCGG AGACTTGGAATATTG Daci_4404 4821383 - 4820370 - | PIG3 family NAD(P)H quinone oxidoreductase Daci_4405 4821506 - 4822402 + | LysR family transcriptional regulator Daci_4406 4824335 - 4822374 - | multi-sensor hybrid histidine kinase Daci_4407 4825241 - 4824381 - | histidine kinase Daci_4408 4826281 - 4825238 - | putative anti-sigma regulatory factor, serine/threonine protein kinase TERM 3831 4825737 - 4825691 - G 74 -13 -3.64703 | gap 1, overlap 4825693 GTTCTGCGACGCAAA GACATCGACCGCCGCACGGGC CGCCTC GCCCGC-CAGCGGTCCATGGC CCAGGCCATCGGCCA TERM 3832 4825735 - 4825693 - G 76 -14.2 -3.40597 | gap 1, overlap 4825691 TCTGCGACGCAAAGA CATCGACCGCCGCACGGGC CGCCTC GCCCGC-CAGCGGTCCATG GCCCAGGCCATCGGC Daci_4409 4826676 - 4826272 - | putative anti-sigma regulatory factor, serine/threonine protein kinase TERM 3833 4826373 - 4826408 + g 73 -7.6 -4.17023 | gap 1, opp_overlap 4826393 GCAGGCCCAGGCCCA TTCCCATG-CCGGTGGT GAA ACCATCGGTCATGGCCA TTTTCAGATCCTTGA Daci_4410 4827040 - 4826666 - | anti-sigma-factor antagonist Daci_4411 4827890 - 4827048 - | anti-sigma-factor antagonist TERM 3834 4828270 - 4828247 - H 78 -15.4 -2.53392 | opp_overlap 4828247 AAACTGCGCAATGCA TGCCCTTGGA AAAT TCCAAGGGCA TTTCACACCTGGGCG TERM 3835 4828247 - 4828270 + H 93 -15.4 -3.55444 | opp_overlap 4828247 AAACTGCGCAATGCA TGCCCTTGGA AAAT TCCAAGGGCA TTTCACACCTGGGCG TERM 3836 4828822 - 4828799 - g 72 -3.8 -4.63218 | CCTTCCGCAAGAAAA CGCTGGAG GGCCTGAA CTTCAGCG ATGCCGATCTGGCCG Daci_4412 4828342 - 4829043 + | pentapeptide repeat-containing protein Daci_4413 4830116 - 4829079 - | hypothetical protein TERM 3837 4830183 - 4830195 + G 70 -3.3 -4.43844 | overlap 4830182 CTTCGCCAGAAACTG CTGGC TCC GCTGG TTTTCTGCCTGCTGG Daci_4414 4830153 - 4831709 + | methyl-accepting chemotaxis sensory transducer Daci_4415 4831736 - 4832041 + | NIPSNAP family protein TERM 3838 4832049 - 4832078 + F 82 -12.8 -3.57144 | TCGGCTGAACCTCCC CCCGCGCCACGT CCATGT GCGTGGCGCGCG TTTGCAAATACGGAA Daci_4416 4832154 - 4833146 + | substrate-binding region of ABC-type glycine betaine transport system Daci_4418 4834025 - 4834750 + | ABC transporter related Daci_4419 4834798 - 4836165 + | nitrilotriacetate monooxygenase Daci_4420 4837090 - 4836197 - | extracellular solute-binding protein TERM 3839 4836617 - 4836641 + g 75 -5.6 -4.66833 | overlap 4836615 CACCAGGGCCATCGG GCTGGTGCCC TTGGT GGAAACCAGC TTTTTGCCCTTGAGA TERM 3840 4837661 - 4837688 + G 90 -14.2 -4.04318 | gap 1, opp_overlap 4837622 GCGCTGCGAGAGCGA GCCCGAGCTGCTG CGC CA-CGGCTCGGGC TTTGTGCTGTATGCG Daci_4421 4837272 - 4838246 + | magnesium and cobalt transport protein CorA Daci_4422 4838291 - 4839307 + | hypothetical protein Daci_4423 4845418 - 4839368 - | hypothetical protein TERM 3841 4840213 - 4840187 - G 79 -2 -4.85599 | opp_overlap 4840192 CGCATCGGAGAAAAA CGGCTCCAGCCC CGG GTCCTTGCGCCG CTCCTCGTCCAGCAA TERM 3842 4840843 - 4840877 + g 82 -14.2 -3.76482 | overlap 4840858 CGGCCGAGGGGATCT GCTCCAGCAGCTGGCG CAG CGGCAGGTGCTGGCGC TTCTTGGTGATCTCG TERM 3843 4842712 - 4842683 - G 76 -14.3 -3.53012 | gap 1 CGCCGCCTCGGCAAA GCCCTGGC-CTGCA TCG TGCAGCGCCTGGGC GGCATCCACCATCTG TERM 3844 4842857 - 4842847 - G 72 -8.2 -4.07885 | opp_overlap 4842846 CAGTCTCGCGCAAAA GGGC CAG GCCC GCTTCGTCATGGGCC TERM 3845 4844005 - 4843958 - G 77 -15 -3.15544 | gap 3, opp_overlap 4843930 4843960 CTCCAGGTCGATGAA GACCT-CGCGCCGCTGCAGCGCC TCTTC GGCG-TGC-GCGCCGCGCAGGTC TTCCAGGCTGCGCGC Daci_4424 4845861 - 4845616 - | hypothetical protein Daci_4425 4845937 - 4846992 + | cation diffusion facilitator family transporter Daci_4426 4848665 - 4846995 - | extracellular solute-binding protein TERM 3846 4848721 - 4848701 - R 78 -10.4 -3.93004 | gap 1, opp_overlap 4848702 4848703 ACAAGATCGCAGAAA GGCGGCGGC GGGT GCCG-CGCC GGCTGCACCAGACGG Daci_4427 4850424 - 4848781 - | leucyl aminopeptidase TERM 3847 4850550 - 4850583 + G 77 -11.7 -3.86194 | gap 1 TTCCCCCAACCCCGC CTGGCTGGCCCTGCCC GCC GCGCAGCGCCAGC-AG TTTCTGGACGCGGTT Daci_4428 4850509 - 4850847 + | hypothetical protein Daci_4429 4851577 - 4850903 - | hypothetical protein Daci_4430 4852604 - 4851618 - | hypothetical protein Daci_4431 4853512 - 4852652 - | 6-phosphogluconate dehydrogenase NAD-binding Daci_4432 4853727 - 4854383 + | GntR family transcriptional regulator Daci_4433 4855637 - 4854390 - | major facilitator transporter TERM 3848 4855001 - 4854990 - G 73 -7.2 -4.11216 | CGTCCAGGCGCAAAA GCCG GGGT CGGC GATCACCTGGCGCAC TERM 3849 4855446 - 4855412 - G 82 -14.9 -3.40899 | overlap 4855399 AACCCGTCAGCAGAA CGGGCCGGCGCCCGA AGCGG TCGGCCAGCGGCCCG CACACCAGCTGGGCG Daci_4434 4856159 - 4855722 - | 3-dehydroquinate dehydratase TERM 3850 4856066 - 4856121 + g 83 -15.3 -3.54029 | overlap 4856069 4856069 TGCGCAGCGAGACGT CGATCTCGGCCAGCGTGACCGTGCC GTATTG GGCGGGGTCGCGCTGGCCGAACATG TTGTGGTTGATGCCG TERM 3851 4856069 - 4856119 + g 82 -16.2 -3.34404 | gap 1, overlap 4856066 4856069 GCAGCGAGACGTCGA T-CTCGGCCAGCGTGACCGTGCC GTATTG GGCGGGGTCGCGCTGGCCGAACA TGTTGTGGTTGATGC TERM 3852 4856069 - 4856118 + g 77 -17.8 -2.60161 | overlap 4856069 4856066 GCAGCGAGACGTCGA TCTCGGCCAGCGTGACCGTGCC GTATTG GGCGGGGTCGCGCTGGCCGAAC ATGTTGTGGTTGATG Daci_4435 4857274 - 4856216 - | oxidoreductase domain-containing protein Daci_4436 4858437 - 4857286 - | porin TERM 3853 4858487 - 4858512 + r 77 -11.1 -3.59698 | CGGGCGTGGCTGCGC CCTGCCCTGGA CGCA TTCAGGGCCGG TTGTCTGTCGGCTGG Daci_4437 4859362 - 4858529 - | shikimate dehydrogenase substrate binding subunit Daci_4438 4860805 - 4859411 - | major facilitator transporter Daci_4439 4860992 - 4861762 + | IclR family transcriptional regulator Daci_4440 4861762 - 4862217 + | hypothetical protein Daci_4441 4863259 - 4862234 - | aldo/keto reductase TERM 3854 4863308 - 4863282 - R 100 -18.1 -4.23999 | TCACAGGGAAAAGAA GCAAGGGAGCG GCCAG CGCTCCCTTGC AATGTCGAAGGCCCA Daci_4442 4864228 - 4863332 - | xylose isomerase domain-containing protein Daci_4443 4865190 - 4864306 - | 4-hydroxyphenylpyruvate dioxygenase Daci_4444 4866201 - 4865242 - | oxidoreductase domain-containing protein TERM 3855 4866163 - 4866180 + g 70 -8.3 -3.86322 | opp_overlap 4866161 GATGCCGAAGGCACC GGCGCCC GCCA GGGCGAC TTTAATGGTCTTGTT Daci_4445 4867153 - 4866284 - | protocatechuate 4,5-dioxygenase subunit beta Daci_4446 4867613 - 4867155 - | protocatechuate 4,5-dioxygenase subunit alpha TERM 3856 4867413 - 4867431 + g 90 -9.5 -4.72497 | GCACCAGTTGAGGTC GCGGGCC AGCAC GGCCTGC TTTTGTTCCTCGCTC TERM 3857 4867543 - 4867598 + g 70 -9 -3.89524 | gap 1, opp_overlap 4867575 TGGTTGAGCCAGTAG CCTTTGCGGGAC-TGCTCGGCATCA AAAATGA TGGTGCCGGGCACGTCCAGATAGGG TTTGTCCAATGCCAT Daci_4447 4868579 - 4867662 - | amidohydrolase 2 Daci_4448 4869273 - 4868590 - | hypothetical protein TERM 3858 4869299 - 4869316 + r 74 -6.9 -4.4078 | overlap 4869300 TTGGATCTGTGGTGG CGGCCTG CTTA CAGGCCC TTTTGCTTGAGGGCG Daci_4449 4870335 - 4869307 - | amidohydrolase 2 TERM 3859 4870393 - 4870442 + r 82 -14.9 -3.21099 | gap 1, overlap 4870396 GGAGGGGTCAGTGGA GGGGTGCGGCAGGCGCCGCGCCGC CCT GCGGCTCGG-GACTGCTGTACTGC TTGATGATGAGGGCG TERM 3860 4870396 - 4870439 + r 84 -17.4 -2.80016 | gap 1, overlap 4870393 GGGGTCAGTGGAGGG GTGCGGCAGGCGCCGCGCCGC CCT GCGGCTCGG-GACTGCTGTAC TGCTTGATGATGAGG Daci_4450 4871767 - 4870385 - | major facilitator transporter TERM 3861 4871834 - 4871863 + r 100 -15 -4.21974 | overlap 4871837 GCGGCCCGCACCTTG CACCGCAGGGGC CGGCAA GCCCCTGCGCTG TTTCTTCAGTCCTGC TERM 3862 4871837 - 4871860 + r 77 -15.3 -2.81702 | overlap 4871834 GCCCGCACCTTGCAC CGCAGGGGC CGGCAA GCCCCTGCG CTGTTTCTTCAGTCC Daci_4451 4873035 - 4871869 - | hypothetical protein TERM 3863 4873113 - 4873143 + r 85 -15.5 -3.17486 | gap 1, overlap 4873106 4873117 TACCAGGCTTGCGCT GCGGGTTGCGGCGC CCGT GCGCCGCAACT-GC TTGATACAACTTATT TERM 3864 4873117 - 4873140 + r 86 -18.2 -2.78395 | overlap 4873113 4873106 AGGCTTGCGCTGCGG GTTGCGGCGC CCGT GCGCCGCAAC TGCTTGATACAACTT Daci_4452 4873791 - 4873174 - | hypothetical protein Daci_4453 4874887 - 4873877 - | hypothetical protein Daci_4454 4875798 - 4874884 - | amidohydrolase 2 TERM 3865 4875492 - 4875547 + g 74 -13.3 -3.35679 | gap 3 TGCTCTCATCCACCA CGGCCACGCCGCGC-AGGCGCTGCG-GC TGG GCGCGCAGCGCCTGGAGCAG-GTAGCTG TTGTCCGTGCCCAGA TERM 3866 4876031 - 4875993 - g 81 -8.1 -4.65895 | overlap 4875995 GCCCGCATGGAAAAA GACCTGG-GCGTGCAGCTG TTC CAGC-GCTCACGCCAGGGC GCCCTGCCCACCCCG TERM 3867 4876029 - 4875995 - g 70 -9.3 -3.94812 | overlap 4875993 CCGCATGGAAAAAGA CCTGG-GCGTGCAGCTG TTC CAGC-GCTCACGCCAGG GCGCCCTGCCCACCC Daci_4455 4875870 - 4876757 + | LysR family transcriptional regulator Daci_4456 4876903 - 4877679 + | short chain dehydrogenase TERM 3868 4877715 - 4877684 - T 79 -15.9 -2.73483 | gap 1, overlap 4877686 ACCGGATTTGAACGA GACCCCTGGCC-GG CATGC CCAGGCCAGGGGCC GCGGCGCCTGGACCG TERM 3869 4877713 - 4877686 - T 79 -14.9 -2.91274 | gap 1, overlap 4877684 CGGATTTGAACGAGA CCCCTGGCC-GG CATGC CCAGGCCAGGGG CCGCGGCGCCTGGAC Daci_4457 4878263 - 4877748 - | rhs element Vgr protein TERM 3870 4877967 - 4877943 - G 70 -4.3 -4.40963 | ATGCTCGAAAAAGAA GTAGATGCC TTCGTGC AGCATCCAC CGCGGGACAAGGCCG Daci_4458 4878917 - 4879342 + | ferric uptake regulator family protein TERM 3871 4879435 - 4879392 - T 100 -17.6 -3.68569 | gap 1, opp_overlap 4879397, overlap 4879397 4879399 CCACGGATCCAAGAA GATGACAGCCATGGTGCAGGC CCT GCCTGAACCATGGCTGTT-TC TTTTTTCACCCGCCC TERM 3872 4879431 - 4879397 - T 100 -23 -2.86259 | opp_overlap 4879397, overlap 4879392 4879399 GATCCAAGAAGATGA CAGCCATGGTGCAGGC CCT GCCTGAACCATGGCTG TTTCTTTTTTCACCC TERM 3873 4879397 - 4879431 + T 100 -23 -5.04249 | opp_overlap 4879397 4879392 4879399 GATCCAAGAAGATGA CAGCCATGGTGCAGGC CCT GCCTGAACCATGGCTG TTTCTTTTTTCACCC TERM 3874 4879429 - 4879399 - T 88 -19.8 -2.97423 | opp_overlap 4879397, overlap 4879397 4879392 TCCAAGAAGATGACA GCCATGGTGCAGGC CCT GCCTGAACCATGGC TGTTTCTTTTTTCAC Daci_4459 4880821 - 4879457 - | hypothetical protein Daci_4460 4882245 - 4880818 - | hypothetical protein TERM 3875 4881870 - 4881853 - G 72 -8.3 -3.96624 | CACCTGCAGCACAAA GGCCGGC GTGA GCTGGCC GAACCGCAGCAGCAG Daci_4461 4883063 - 4882242 - | ABC transporter related TERM 3876 4882635 - 4882621 - G 81 -7 -4.56775 | ATGCCCTTGGAAAAA CCGGAG ACG CGCCGG TCGTGCGCGGCAGCG Daci_4462 4885345 - 4883072 - | TonB-dependent siderophore receptor TERM 3877 4884835 - 4884825 - G 77 -3.2 -4.72272 | overlap 4884826 CGCCCCGAGGAAAAA CCGT TGA ACAG GGTGGCCATGCCCAC Daci_4463 4885789 - 4885400 - | hypothetical protein TERM 3878 4885615 - 4885643 + g 70 -14.5 -2.73875 | overlap 4885611 TTTCGCCAGCCTGGC CGCGTTGGCCGGC CTG GCCGGTCAGCGCA TCATCTTCGCAGCCG TERM 3879 4885690 - 4885674 - G 72 -5.8 -4.38712 | gap 1 TTGAGGCCTACAAAA GCCTGGG CAGG CCC-GGC CGCCGCCTGCCGGAT Daci_4464 4886538 - 4885924 - | TetR family transcriptional regulator TERM 3880 4887356 - 4887342 - g 89 -4.3 -5.24531 | ATTGCCCAGAAAAAA TTGCT CGACC AGCAA ATCGACGATGCCCGC Daci_4465 4887306 - 4887584 + | histone family protein nucleoid-structuring protein H-NS TERM 3881 4887637 - 4887585 - T 72 -14.1 -2.6342 | overlap 4887581 4887582 TTCGAAATCAAGTGA GTCCCTGCCGCGCATGGGC-CCGCC CGCAC GGCGGCGCACATGCGCGGATGAG-C GTCATGCAGGCACCA Daci_4466 4888043 - 4887639 - | endoribonuclease L-PSP Daci_4467 4888500 - 4888048 - | thioesterase superfamily protein Daci_4468 4890150 - 4888510 - | AMP-dependent synthetase and ligase TERM 3882 4889151 - 4889186 + g 95 -15.4 -4.25104 | gap 1 GCTTCCACAGCTGGC GCGTGGCGTCCGGC-AG GGC CTCGCCGGCCGACACGC TTTTCCTGAGCGACG Daci_4469 4891361 - 4890192 - | acyl-CoA dehydrogenase domain-containing protein Daci_4470 4892221 - 4891364 - | enoyl-CoA hydratase TERM 3883 4891786 - 4891757 - G 82 -11.3 -4.1891 | gap 1, overlap 4891753 GCGGGTGAAGAGAAA CGCC-GTGCGCGCC GCG GGCGTGCCCAGGCG CATGTCGGCCGCCAG TERM 3884 4892288 - 4892248 - R 70 -4.5 -4.50943 | gap 1 CAAGAATTCAGAAAA CGG-GGGGAGTGGACCGG GTTCAG CCGGTCATCACCTCGCCG CCGTCGACGGCAATG Daci_4471 4893079 - 4892267 - | short-chain dehydrogenase/reductase SDR Daci_4472 4895424 - 4893076 - | salicylyl-CoA 5-hydroxylase Daci_4473 4895612 - 4895866 + | hypothetical protein Daci_4474 4895863 - 4896609 + | hypothetical protein Daci_4475 4897030 - 4896629 - | hypothetical protein Daci_4476 4898162 - 4897737 - | hypothetical protein Daci_4477 4898650 - 4898312 - | transposase, IS4 family protein Daci_4478 4899135 - 4898710 - | putative TIS1421-transposase orfA protein Daci_4480 4899580 - 4899467 - | hypothetical protein Daci_4481 4900324 - 4899734 - | hypothetical protein TERM 3885 4899856 - 4899836 - G 76 -2.6 -4.7497 | TGTATTTACCAAAAA CAATGCAA CAAGC TTGGATTG CTCGTGACTCAATTT Daci_4482 4904889 - 4900303 - | YD repeat-containing protein Daci_4483 4907304 - 4904968 - | type VI secretion system Vgr family protein TERM 3886 4907014 - 4907044 + g 70 -12.4 -3.31792 | GTCGCTCTTGCGCGT GGCCAGCCACAGCC AGG GGCTCAGGCGGGCC TTGTAGGCGTAGTGG TERM 3887 4907118 - 4907149 + g 72 -3.6 -4.58395 | CGATGAAGCGCCTGC CGCCGCCCTGGG TTTCTATT TCTATGGTGGCG TTTTTACCCAATAGG Daci_4484 4908253 - 4907540 - | ABC transporter related Daci_4485 4909047 - 4908253 - | ABC transporter related Daci_4486 4910006 - 4909044 - | inner-membrane translocator Daci_4487 4910929 - 4910009 - | inner-membrane translocator TERM 3888 4911036 - 4911005 - R 90 -15.1 -3.4594 | gap 1, overlap 4910999 4911006 4911009 GAAAATCAAGATCAA GGCACGCCGCGCCC GACGG GGGCGCGGCG-GCG GGGTCACATCTTGCA TERM 3889 4911035 - 4911006 - R 85 -18.6 -2.6648 | gap 1, overlap 4911005 4910999 4911009 AAAATCAAGATCAAG GCACGCCGCGCCC GACGG GGGCGCGGCG-GC GGGGTCACATCTTGC TERM 3890 4911033 - 4911009 - R 95 -20 -2.6078 | overlap 4911006 4911005 4910999 ATCAAGATCAAGGCA CGCCGCGCCC GACGG GGGCGCGGCG GCGGGGTCACATCTT Daci_4488 4912215 - 4911040 - | extracellular ligand-binding receptor TERM 3891 4911591 - 4911628 + g 74 -13.4 -3.26471 | overlap 4911592 GCTTGGCCGCACGGA TCTGGGCCAGCTCGGC CGCGTA GTCGATCTGGCCCAGC TTGGTGTAGACCTCC TERM 3892 4911592 - 4911627 + g 73 -16.9 -2.55668 | overlap 4911591 CTTGGCCGCACGGAT CTGGGCCAGCTCGGC CGCGTA GTCGATCTGGCCCAG CTTGGTGTAGACCTC TERM 3893 4912612 - 4912632 + G 73 -9.6 -3.85505 | opp_overlap 4912612, overlap 4912614 TTTTCCCGGCAGCAA CCGGGGCG GCAGG CGCCCCTG TTCTCTTCTTCATCC Daci_4489 4912413 - 4913318 + | putative esterase Daci_4490 4913315 - 4913803 + | MarR family transcriptional regulator Daci_4491 4915421 - 4913826 - | diguanylate cyclase TERM 3894 4914063 - 4914012 - G 74 -12.3 -3.59262 | gap 3, opp_overlap 4914047 4914048 CGTCACATGGCCAAA GCGGCTGATGCG-GTGC-TCCAGGGC CAG GCCCTCGATGCGCGCGCG-CAGCCGC TCGGCCACCTGCTGC Daci_4492 4915915 - 4916130 + | hypothetical protein Daci_4493 4917653 - 4916208 - | DEAD/DEAH box helicase domain-containing protein Daci_4494 4917961 - 4919868 + | hypothetical protein Daci_4495 4919924 - 4921372 + | hypothetical protein Daci_4496 4922315 - 4921419 - | 2-dehydropantoate 2-reductase TERM 3895 4921756 - 4921776 + g 72 -8.9 -4.07568 | AGAGCCATGAGCCCG GCCGCTGCG TTC TGCAGCAGC TTTTGCCACGCCAGG TERM 3896 4922120 - 4922102 - G 89 -7.4 -4.84359 | overlap 4922105 TGACCGCGAGAAAAA CAAGGTCC ACC GGACCTTC GACCTGGGCCGGATC TERM 3897 4922117 - 4922105 - G 82 -9.1 -4.52873 | overlap 4922102 CCGCGAGAAAAACAA GGTCC ACC GGACC TTCGACCTGGGCCGG TERM 3898 4922400 - 4922420 + r 76 -6.8 -4.46926 | TCTGCGCAGTGGAGG GGCAAGTC GGCGG GCCTTGCC TTTTGTAATGCAATA Daci_4497 4923485 - 4922376 - | hypothetical protein TERM 3899 4922805 - 4922835 + g 71 -11.8 -3.64703 | opp_overlap 4922805 GACCAGTGGCAACCA GTGCGCGGCAGTAC CGG GTACTGCCGCCAGC TTTCCCTGCACCAGA Daci_4498 4923561 - 4923950 + | MerR family transcriptional regulator Daci_4499 4924047 - 4924460 + | glyoxalase/bleomycin resistance protein/dioxygenase TERM 3900 4925064 - 4925074 + G 75 -4.6 -4.56597 | overlap 4925056 4925055 GGCGGGCAGGTGGGT GCCG CCG TGGC TTTTTCGCCGGACCA Daci_4500 4924587 - 4925813 + | glucose sorbosone dehydrogenase Daci_4501 4926122 - 4925889 - | hypothetical protein Daci_4502 4926298 - 4927680 + | transcriptional regulator Daci_4503 4928527 - 4927811 - | aspartate racemase TERM 3901 4928712 - 4928729 + G 76 -7 -4.30719 | TTTTCCCAACTGCTG GGCATG ACGCCG CATGCC TTTCTTGTGGAAACC Daci_4504 4928544 - 4928960 + | AraC family transcriptional regulator Daci_4505 4929342 - 4930571 + | diguanylate phosphodiesterase with GAF sensor(s) Daci_4506 4930865 - 4931974 + | acyl-CoA dehydrogenase domain-containing protein TERM 3902 4932557 - 4932508 - g 83 -20 -2.70932 | gap 1, opp_overlap 4932531, overlap 4932519 GCTGGGCGGCAAGCA CGGCGACCACATCGGCGGCGAGC GCCTG GC-CGCCGCCGCCATGGTGGCCG GCGAGATACAGGCTT Daci_4507 4932056 - 4932904 + | hypothetical protein TERM 3903 4933319 - 4933343 + G 71 -10.8 -3.57144 | gap 1 CGCGTGGCGCACAGG TGGAAG-CCGG AGCG CCGGCCTTCCA TTTCCGGCTCAGCAA Daci_4508 4932913 - 4934181 + | hypothetical protein Daci_4509 4934380 - 4934730 + | hypothetical protein TERM 3904 4935341 - 4935355 + T 72 -11.4 -3.39803 | overlap 4935314 4935352 AGGAATTCTTCTGCG CGCAGG TTG CCTGCG TTGTAGCTGTCAGTG Daci_4510 4935662 - 4935411 - | hypothetical protein Daci_4511 4936366 - 4935659 - | hypothetical protein TERM 3905 4936146 - 4936178 + g 72 -4.7 -4.46212 | overlap 4936150 ACAGTCTTAACGGCT GGCTGCGTCTGTGGT GAA GCTACAAGCGCGTCC TTTTCTGCTACCAGC Daci_4512 4936860 - 4936636 - | hypothetical protein Daci_4513 4937735 - 4937307 - | hypothetical protein Daci_4514 4948834 - 4937765 - | YD repeat-containing protein TERM 3906 4939938 - 4939957 + g 75 -8.5 -4.15044 | overlap 4939934 4939915 AGCGGGCTGTAGGTA GCCGCGC TGCCTT GCGTGGC TTTGTTCAGGCCCGC TERM 3907 4944018 - 4944028 + g 71 -2.4 -4.57341 | AGCCCCATGTCCTCG GGGC CCT GCAC TTTTTGCAGGACGTT TERM 3908 4946817 - 4946803 - G 73 -7.1 -4.13945 | ACTGCGACTGGAAAA CGCTG TGCTC CAGCG AAGAACCAGCCAGCC TERM 3909 4948319 - 4948288 - G 73 -12.2 -3.53012 | CCGGCGTGGCGGAAA CCTCCTGCCCCGCC TCGT AGCTGGGCAGGATG GCCGGGGCGTTCACC TERM 3910 4948463 - 4948501 + g 81 -12.5 -3.86822 | gap 1 GGCCTGTGCCTTTTG CTGCCTGTCGCCAT-CCA GCCC TGGCATGGCGGCGGCCAG TTTCTGCAGCAGTTG Daci_4515 4966200 - 4948969 - | APHP domain-containing protein TERM 3911 4959498 - 4959521 + g 75 -9.6 -4.07568 | GATAGGCGTCAGTCG GGCTGGAG ACAAAGAC CTCCAGCC TTTTGGCCGCCCGGC TERM 3912 4964607 - 4964656 + g 74 -13.6 -3.32844 | gap 2, opp_overlap 4964609 GCGCCTGCGCCGAGA CATGGAC-ACGGCTGGGGC-TTGC GGCC GCATTGCCCCAGCCGCCGTCCAGG TTCTGCCATGACAGC TERM 3913 4964654 - 4964609 - G 80 -17 -2.87132 | gap 2, opp_overlap 4964607 GCCTGCGCCGAGACA TGGAC-ACGGCTGGGGC-TTGC GGCC GCATTGCCCCAGCCGCCGTCCA GGTTCTGCCATGACA Daci_4516 4966796 - 4966263 - | hypothetical protein TERM 3914 4967389 - 4967419 + G 71 -2.4 -4.56597 | ACAGCTATCTTTATT GCAGCAAGGTCG AACAGAG CCACCGTGCCGC TTTTTACCGCCCCGC Daci_4517 4967211 - 4967450 + | hypothetical protein Daci_4518 4968407 - 4967487 - | LysR family transcriptional regulator Daci_4519 4968537 - 4969592 + | alcohol dehydrogenase TERM 3915 4970230 - 4970275 + G 79 -11.9 -3.96148 | gap 2 TGCGCAGTGGCTGCT GGA-GCGGCTTGCGC-CCTGG AGCCTG CCGGGCGCGCAGGCCGAATCC TTTGTGCTGCAAAGC Daci_4520 4969589 - 4970389 + | hypothetical protein Daci_4521 4970427 - 4971443 + | hypothetical protein Daci_4522 4971556 - 4972635 + | porin TERM 3916 4972651 - 4972699 + F 95 -18.1 -3.28791 | gap 1 TTGCCGGGGCAGGCG CGGCCAG-CGCCTGCCATGCCG ACAGGG CGGCCTGGCTGGAGTCTGGCCG TTGTAACAACCCCAT Daci_4523 4972945 - 4974429 + | AraC family transcriptional regulator TERM 3917 4974534 - 4974516 - g 79 -5.3 -4.6856 | opp_overlap 4974516 GAAATACCTGAAAAA CATGAAG ACGGG CTCCATG TTGGGTCTGGGATTT Daci_4524 4974499 - 4976298 + | methyl-accepting chemotaxis sensory transducer Daci_4525 4977103 - 4976306 - | short-chain dehydrogenase/reductase SDR Daci_4526 4978115 - 4977105 - | NMT1/THI5-like domain-containing protein TERM 3918 4978054 - 4978030 - G 74 -15.7 -3.05816 | overlap 4978018 GGAGCGGCCAGGCAA TTGCCGGCCAG CGC CAGGCCGGCAA AACCGGCAGAGGCGC Daci_4527 4978915 - 4978154 - | binding-protein-dependent transport systems inner membrane component TERM 3919 4978538 - 4978517 - G 72 -4.4 -4.60487 | overlap 4978522 4978525 CATCAGCGGGAAAAA GCAGATCA GCGCCG TGATCAGC ACCGTGGGCAGCATG Daci_4528 4979718 - 4978912 - | ABC transporter related Daci_4529 4981220 - 4979724 - | acyl-CoA reductase Daci_4530 4982335 - 4981217 - | putative acyl protein synthase/acyl-CoA reductase-like protein Daci_4531 4984271 - 4982523 - | hypothetical protein TERM 3920 4983966 - 4983928 - G 70 -8.9 -3.85698 | gap 1, opp_overlap 4983941 CCGCGTGTGGACAAA TCGGGCAGATCCAGCGCC ACGC AGCGCTGCAT-TGCCAGA TCGCAGCGATGCACA Daci_4532 4985436 - 4984372 - | transport protein Daci_4533 4986074 - 4985418 - | TetR family transcriptional regulator Daci_4534 4987925 - 4986096 - | X-Pro dipeptidyl-peptidase domain-containing protein Daci_4535 4988292 - 4988579 + | hypothetical protein Daci_4536 4988661 - 4989161 + | MarR family transcriptional regulator Daci_4537 4990055 - 4989168 - | amidohydrolase 2 TERM 3921 4990591 - 4990607 + G 86 -5.7 -4.82901 | AGATGCGCCTGCCGC GCGACTG GAA CGGGCGC TTTTTCTACCAGGCC Daci_4538 4990251 - 4991960 + | tannase and feruloyl esterase TERM 3922 4992103 - 4992084 - f 77 -7.8 -4.36914 | gap 1 CTGCGCCCGAGAAAA GGCGCGCGG ACA CC-CACGCC AAGACGGCAACGATT Daci_4539 4992143 - 4993291 + | porin TERM 3923 4993564 - 4993533 - g 77 -10.9 -3.83205 | gap 1, opp_overlap 4993483, overlap 4993557 ACGCCCTACAGCAAA GGGCCGGGCTTTGT GGAAA ACA-AGCCCGGCGC CGGTGGCCGCATCGC Daci_4540 4993341 - 4994333 + | hypothetical protein TERM 3924 4994535 - 4994553 + G 70 -12.4 -3.32844 | CGCCGGTTGATGTCG GGCCTGCG CGA TGCAGGCC TTGTCACCTCCGCCA Daci_4541 4994400 - 4994885 + | BadM/Rrf2 family transcriptional regulator TERM 3925 4995004 - 4995024 + G 70 -9 -3.85817 | gap 1 CGCTTCGTGGACCAG GCCG-GCGA GACA TCGCACGGC TTTCTCACCCAGGAT Daci_4542 4994872 - 4995771 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 3926 4995831 - 4995798 - T 89 -12.4 -4.14243 | gap 1 CACCCTATCCGAAAA CTGC-GCCGCCCGCA TCCAG CGAGGGCGGCCGCAG AAGATCGGCATTGAC Daci_4543 4996005 - 4995787 - | hypothetical protein Daci_4544 4996933 - 4996133 - | Beta-lactamase TERM 3927 4996913 - 4996892 - G 100 -10.1 -5.53288 | overlap 4996893 GGGAAGGCAAAAAAA TGCTGCCAC GACC GTGGCAGCG GACCCAGGAAATCCA TERM 3928 4996912 - 4996893 - G 86 -13.6 -3.90888 | overlap 4996892 GGAAGGCAAAAAAAT GCTGCCAC GACC GTGGCAGC GGACCCAGGAAATCC Daci_4545 4998799 - 4997105 - | acyl-CoA synthetase TERM 3929 4999379 - 4999335 - g 82 -15 -3.48276 | gap 1, opp_overlap 4999360 CGCGTGGCCATAGAA GGCGT-GGCCAGCACACCGCC GCCC GGCAGCGTGCTGGCCGATGGC GCGCGCGACAGCTAT Daci_4546 4998969 - 4999553 + | pyridoxamine 5'-phosphate oxidase-related FMN-binding Daci_4547 5000058 - 4999555 - | hypothetical protein Daci_4548 5000963 - 5000061 - | LysR family transcriptional regulator TERM 3930 5000143 - 5000109 - G 72 -9.2 -4.03204 | opp_overlap 5000129 CATGAAATCCACAAA CGCGCGCACGGC CGGGCGCAGAT GCCGCGTGCGCG GATACAGCGCGTGGT TERM 3931 5000441 - 5000388 - G 76 -13.8 -3.53012 | gap 1, overlap 5000389 CGGGCCCGCCGCAAA GGCCAGGGCGCGGTGCTCG-GCC AATTGCCCG GGCACCTGCACCACGCCCTGGCG CATCAGGTAGGCGGG TERM 3932 5000440 - 5000389 - G 78 -17.3 -2.71712 | gap 1, overlap 5000388 GGGCCCGCCGCAAAG GCCAGGGCGCGGTGCTCG-GCC AATTGCCCG GGCACCTGCACCACGCCCTGGC GCATCAGGTAGGCGG Daci_4549 5001894 - 5001025 - | isochorismatase hydrolase TERM 3933 5001823 - 5001801 - G 72 -4.1 -4.56597 | overlap 5001803 CCGTGCTTTGAAAAA TACCCCATC TCAGT GATGGCGCA TAAGGCCTTGGGCCT TERM 3934 5001934 - 5001892 - G 83 -15.6 -3.6502 | gap 1, opp_overlap 5001929 5001931, overlap 5001894 5001895 5001921 GATGCCGCATTGAAA CATGGCCTGCGGCCCTCCC GCTCAA GAAAGGGCCGCAGGCCG-G CGCGGCGCTAGTTCT TERM 3935 5001933 - 5001894 - G 93 -19.3 -3.40597 | opp_overlap 5001929 5001931, overlap 5001892 5001895 5001921 TGCCGCATTGAAACA TGGCCTGCGGCCCTCCC GCTCAA GAAAGGGCCGCAGGCCG GCGCGGCGCTAGTTC TERM 3936 5001932 - 5001895 - R 100 -22.8 -2.64144 | opp_overlap 5001929 5001931, overlap 5001894 5001892 5001921 GCCGCATTGAAACAT GGCCTGCGGCCCTCCC GCTCAA GAAAGGGCCGCAGGCC GGCGCGGCGCTAGTT Daci_4550 5006117 - 5001942 - | ATP-dependent helicase HrpA TERM 3937 5003483 - 5003508 + g 72 -5.3 -4.4078 | gap 1 GGCGCATCAGCTCGT CGCGCGACAGGC GCA GCAGGTCG-GCG TTTTCCTTGGCCGCC TERM 3938 5003798 - 5003844 + g 85 -15.8 -3.62046 | gap 1, opp_overlap 5003798 5003836 GGCCGTTGTAGACCA CCAGGCCGTAGAGCGTGGCGC GCTCCA GCGCCAC-CACATCGGCCTGG TTCTTGGACCAGTGC TERM 3939 5003844 - 5003798 - G 73 -15.8 -2.62184 | gap 1, opp_overlap 5003798, overlap 5003836 GGCCGTTGTAGACCA CCAGGCCGTAGAGCGTGGCGC GCTCCA GCGCCAC-CACATCGGCCTGG TTCTTGGACCAGTGC TERM 3940 5005328 - 5005374 + g 95 -13.6 -4.25104 | CGCCGCCGGCCCACA GCTCGTCCACGCCTTCGGCGAT GGC GTCGTTGAGGTCGTGGTCGCGC TTTTCCTCGAAGGGG TERM 3941 5007193 - 5007170 - g 74 -13.2 -3.28924 | gap 1 GACCGCCCGCGACAA TGC-GGCCCAC GGC GTGGGCCTGCA GCTGTCGGGCCATAC Daci_4551 5006232 - 5007398 + | metallophosphoesterase Daci_4552 5008535 - 5007426 - | putative hemagglutinin-related protein TERM 3942 5007626 - 5007573 - G 91 -10.8 -4.63527 | overlap 5007542 5007540 5007574 CGAGGACGTGAAAAA GCGCGGCGTGC-GCCCGCCCGAGGCG AAGC CGCCACTGGCGTGCAGCA-GCCCCGT CAAAGGATCGACATC TERM 3943 5007625 - 5007574 - G 74 -14.3 -3.37634 | overlap 5007542 5007540 5007573 GAGGACGTGAAAAAG CGCGGCGTGC-GCCCGCCCGAGGCG AAGC CGCCACTGGCGTGCAGCA-GCCCCG TCAAAGGATCGACAT Daci_4553 5009275 - 5008532 - | extracellular solute-binding protein Daci_4554 5010272 - 5009295 - | GntR family transcriptional regulator Daci_4555 5012913 - 5010298 - | aconitate hydratase TERM 3944 5011758 - 5011735 - G 75 -8.8 -4.20516 | gap 1 GCCGGACGCAACAAA GCCCACG-GCC TGC AGCGCGCGGGC GCTGTCGCCATAGTC TERM 3945 5013288 - 5013244 - g 70 -12.7 -3.28712 | gap 1, overlap 5013226 5013247 GGTGGTGGTGGACAA CAGGCC-CGGCGCCAGCGGC ATGCTG GGCGCAGGCGCCGTGGCACG CGCGGCGGGCGACGG Daci_4556 5013011 - 5014024 + | hypothetical protein Daci_4557 5014080 - 5015063 + | hypothetical protein Daci_4558 5016239 - 5015094 - | metal-dependent phosphohydrolase TERM 3946 5016252 - 5016282 + r 73 -4.7 -4.65838 | gap 2 CATGGAAATCTCCTT GC-GATG-GGTCTGC GCT GCAGGCCTCACCAGC TTTTTGAAATATCTG Daci_4559 5017129 - 5016275 - | DNA ligase III-like protein TERM 3947 5016939 - 5016964 + g 77 -4 -4.72272 | gap 2, overlap 5016943 5016944 CCGTCGCCGGCAAAG CTCAGCGCGGCG TTGG CGCCGT-C-GAG TTTTTCCTCGACGAC Daci_4560 5018398 - 5017541 - | LysR family transcriptional regulator TERM 3948 5018213 - 5018195 - G 80 -16 -3.14931 | CGCATGGGGCAGGAA GTCGGCGC CCA GCGCCGAC AGCTGCACATGGCGC Daci_4561 5018529 - 5018912 + | 4-oxalocrotonate tautomerase Daci_4562 5019847 - 5018963 - | LysR family transcriptional regulator Daci_4563 5019980 - 5020969 + | hypothetical protein TERM 3949 5021540 - 5021564 + G 72 -4.1 -4.55128 | opp_overlap 5021525, overlap 5021542 CTTCCTGCCCCGGGG CCGCGCGCC GGAAGTG GGCGAGCTG TTTTGCTTTCCCGCT Daci_4564 5020983 - 5022614 + | gamma-glutamyltransferase TERM 3950 5022644 - 5022617 - T 76 -12.6 -3.40403 | overlap 5022618 GGCCGGGTACTAGAA GTGCGCGCGGCG GCTA CTCCGCGCGCAG ACGCCCCTGCCGGGT TERM 3951 5022643 - 5022618 - T 78 -16.1 -2.64099 | overlap 5022617 GCCGGGTACTAGAAG TGCGCGCGGCG GCTA CTCCGCGCGCA GACGCCCCTGCCGGG Daci_4565 5023625 - 5022630 - | hypothetical protein Daci_4566 5024542 - 5023652 - | amidohydrolase 2 Daci_4567 5024613 - 5025611 + | LysR family transcriptional regulator Daci_4568 5025663 - 5026868 + | major facilitator transporter Daci_4569 5028014 - 5026881 - | ABC-2 type transporter Daci_4570 5029269 - 5028016 - | ABC-2 type transporter Daci_4571 5030293 - 5029244 - | secretion protein HlyD family protein TERM 3952 5030213 - 5030251 + gr 72 -13.1 -3.06183 | gap 2 CAGGGCCAGCCAGGG GCGCCTGTGCCCCGGCGGC ACG GGCGC-GGGGC-CGGGTGC TTCGGTGGCGCTGCG Daci_4572 5031741 - 5030290 - | outer membrane efflux protein TERM 3953 5030536 - 5030581 + g 78 -10.3 -4.17048 | gap 1 AAGATCCTCCTGGGC CT-GCTGGGCCTGGTACTGGCG GCG TGCCTGCTCCACGCCCAGCCAG TTCTTTTCGACCAGC TERM 3954 5031941 - 5031980 + H 100 -7.9 -5.93809 | gap 2, overlap 5031942 CGCTACACTGGCGCC TGCCTGCGCGAGCATGTCC TGGC GGACCTG-TC-CGCAGGCC TTTTTTTTCTGCCCG TERM 3955 5031942 - 5031979 + H 89 -11.4 -4.15201 | gap 2, overlap 5031941 GCTACACTGGCGCCT GCCTGCGCGAGCATGTCC TGGC GGACCTG-TC-CGCAGGC CTTTTTTTTCTGCCC Daci_4573 5032025 - 5033371 + | N-acetylglutamate synthase TERM 3956 5033408 - 5033466 + T 82 -15.1 -3.21622 | gap 2, overlap 5033458 TTCCCCCTCACGAGG GGGCATACGGGCGGCCGGCGACACCCTCG GTG CGGGGGCGGCGC-GGCCGGCCC-AGGCCC TTCCTCGGTGTCTCT Daci_4574 5034453 - 5033542 - | Beta-lactamase TERM 3957 5035189 - 5035173 - g 70 -15.1 -2.78816 | opp_overlap 5035164 CCACCCTGGACCAGA GCGCGCC GCT GGCGCGC GGGGCCATGTTCGAC Daci_4575 5034563 - 5035420 + | LysR family transcriptional regulator Daci_4576 5035514 - 5036179 + | glutathione S-transferase domain-containing protein TERM 3958 5036161 - 5036194 + F 82 -12.4 -3.59979 | gap 1 GGTCTTTGCCGCCGG CGGCGTGGGCA-GCG ACTGA CGCCTGCCCGCCCCG TTTGCCCTGCCCCGG Daci_4577 5036286 - 5036933 + | lysine exporter protein LysE/YggA Daci_4578 5037925 - 5036969 - | DeoR family transcriptional regulator TERM 3959 5037469 - 5037449 - G 76 -13.9 -3.53444 | opp_overlap 5037439, overlap 5037427 GGACTTGCCGCCAAA GCGCGCGGC CAG GCGGCGCGC GATGTGGTCGGCGTT Daci_4579 5039092 - 5037971 - | alcohol dehydrogenase TERM 3960 5038920 - 5038910 - G 72 -8.2 -4.08767 | opp_overlap 5038912, overlap 5038911 CGGATCTCCCCAAAA GCGC GGC GCGC CAGCCCAGCATTTGC Daci_4580 5040121 - 5039141 - | monosaccharide-transporting ATPase Daci_4581 5040934 - 5040170 - | short-chain dehydrogenase/reductase SDR Daci_4582 5041992 - 5040931 - | periplasmic binding protein/LacI transcriptional regulator Daci_4583 5043558 - 5042056 - | ABC transporter related Daci_4584 5044034 - 5043561 - | RpiB/LacA/LacB family sugar-phosphate isomerase TERM 3961 5044070 - 5044056 - H 70 -5 -4.46212 | opp_overlap 5044056 5044064 5044066, overlap 5044066 CCCTTCATTACAAAA GACCAT CAC ATGATC ATTTGATCAATGTTT TERM 3962 5044064 - 5044082 + H 78 -2.5 -5.04987 | gap 1, opp_overlap 5044056 5044066, overlap 5044056 5044066 TACAAAAGACCATCA CA-TGATC ATTT GATCAATG TTTTTTGAGAGTCTT TERM 3963 5044275 - 5044259 - H 80 -3.7 -5.09521 | TCAACAAATCAAAAA TGACCAC TTA ATGATCA TATGAACAGTTTCGG Daci_4585 5044328 - 5046124 + | dihydroxyacetone kinase, L subunit Daci_4586 5046634 - 5046128 - | disulphide bond formation protein DsbB TERM 3964 5046701 - 5046665 - R 100 -23.7 -3.90112 | opp_overlap 5046668, overlap 5046666 5046668 CCCGGTTGAATGAAA TCAGGGCTGCGGCGCCG GCC CGGCGCTGCAGCCCTGT TCAGCGGGTGCAGGA TERM 3965 5046700 - 5046666 - R 100 -27.2 -2.93853 | opp_overlap 5046668, overlap 5046665 5046668 CCGGTTGAATGAAAT CAGGGCTGCGGCGCCG GCC CGGCGCTGCAGCCCTG TTCAGCGGGTGCAGG TERM 3966 5046668 - 5046698 + r 100 -26.2 -3.02511 | opp_overlap 5046666 5046665 5046668 GGTTGAATGAAATCA GGGCTGCGGCGCCG GCC CGGCGCTGCAGCCC TGTTCAGCGGGTGCA TERM 3967 5046698 - 5046668 - R 100 -24 -3.02166 | opp_overlap 5046668, overlap 5046666 5046665 GGTTGAATGAAATCA GGGCTGCGGCGCCG GCC CGGCGCTGCAGCCC TGTTCAGCGGGTGCA Daci_4587 5047860 - 5046733 - | sulfate ABC transporter, ATPase subunit Daci_4588 5048905 - 5047898 - | sulfate ABC transporter, inner membrane subunit CysW Daci_4589 5049833 - 5048907 - | sulfate ABC transporter, inner membrane subunit CysT Daci_4590 5050916 - 5049888 - | sulfate ABC transporter, periplasmic sulfate-binding protein Daci_4591 5051698 - 5051048 - | hypothetical protein TERM 3968 5051764 - 5051780 + r 81 -5.9 -4.80959 | CACCGCCAACTATCC CAACGAA CGT TTTGTTG TTTTCTTATGGCTTG Daci_4592 5052743 - 5051814 - | LysR family transcriptional regulator TERM 3969 5051917 - 5051887 - G 75 -10.2 -4.04997 | overlap 5051888 AGGAAATCAAGGAAA TGCCGCACGGCCGG CGC CAGGCCGCGCCGCG AGGGGAAGACCGCGT Daci_4593 5052920 - 5053558 + | NAD(P)H dehydrogenase (quinone) TERM 3970 5053604 - 5053627 + F 100 -16 -4.67038 | opp_overlap 5053604 TCAATGAATGGACAA GCGCCTGGGT TTCG GCCCAGGCGC TTTTGCTTTTGGAGA TERM 3971 5053627 - 5053604 - f 90 -15.3 -3.45134 | opp_overlap 5053604 TCAATGAATGGACAA GCGCCTGGG TTTCGG CCCAGGCGC TTTTGCTTTTGGAGA TERM 3972 5053717 - 5053704 - f 70 -3.8 -4.63218 | CTGTGGCGAATAAAA GAGG TATCCG CCTC TGGACCTCCTTTGAA Daci_4594 5053894 - 5054382 + | hypothetical protein TERM 3973 5054432 - 5054450 + T 100 -11.6 -5.47431 | opp_overlap 5054433, overlap 5054433 GAGCTGCAACGCAAA AGCCCGGC ATT GCCGGGCC TTTTTTGTCTCTTGA TERM 3974 5054449 - 5054433 - T 100 -15.1 -4.27584 | opp_overlap 5054433 5054432 AGCTGCAACGCAAAA GCCCGGC ATT GCCGGGC CTTTTTTGTCTCTTG TERM 3975 5054433 - 5054449 + T 93 -15.1 -3.86832 | opp_overlap 5054433, overlap 5054432 AGCTGCAACGCAAAA GCCCGGC ATT GCCGGGC CTTTTTTGTCTCTTG Daci_4595 5055032 - 5054484 - | NADPH-dependent FMN reductase TERM 3976 5055096 - 5055075 - R 72 -11.5 -3.34894 | overlap 5055073 5055076 AACGGGCGGGAAAGA GGCGGGAGG GGCA CCTCCCGCA AGCAGCCATTATGTG TERM 3977 5055095 - 5055076 - R 76 -15 -2.60615 | overlap 5055075 5055073 ACGGGCGGGAAAGAG GCGGGAGG GGCA CCTCCCGC AAGCAGCCATTATGT Daci_4596 5055958 - 5055128 - | NLPA lipoprotein TERM 3978 5056043 - 5056002 - R 73 -5.1 -4.67968 | opp_overlap 5056015 5056040, overlap 5056003 GGAAGAAAGAAGAAA GCGGGTCCGGACA-GCGCG CTCAGC CGCGCTTGTCCAGGCG-GC GGGCCGCCGTGTTGC Daci_4597 5056686 - 5056021 - | binding-protein-dependent transport systems inner membrane component TERM 3979 5056651 - 5056629 - G 78 -9 -4.30576 | overlap 5056630 5056631 TGCCCAGCATCAAAA GGGTCTGGCC CAT GGCCAGCCAC AGCTCGGGCAGGATT TERM 3980 5056817 - 5056770 - R 72 -13.4 -2.52676 | gap 1, opp_overlap 5056799 CAGTGCTCGAAGCCA CCCACG-GCGCGCAGCACCAC GGGGCGG GTGGCGCCGCGCTCGCGCAGG GCCTTGTCGGCACGC Daci_4598 5057635 - 5056754 - | ABC transporter related TERM 3981 5058451 - 5058400 - g 85 -18.6 -3.06796 | gap 1 CGCGAGGCCACGGAA CGCGCCCGTGCCCTGCTGGCCAGCC GCG GCCTGGCCGACTGGGCACCG-CGCG CCGTGGCCGGGCTCA Daci_4599 5057914 - 5058762 + | ABC transporter related Daci_4600 5058780 - 5059373 + | cobalt transport protein Daci_4601 5059444 - 5060037 + | BioY protein Daci_4602 5060030 - 5061550 + | AMP-dependent synthetase and ligase Daci_4603 5061547 - 5062746 + | acetyl-CoA acetyltransferase TERM 3982 5063303 - 5063268 - g 100 -22 -3.53811 | gap 1 TGTATGGCCTGCAAA TGGCCGCAGCCGCCCAG GGC CTGGGCAGCTGCG-CCA TCGGCGCCCTGGCCT Daci_4604 5062751 - 5063476 + | nitroreductase TERM 3983 5063497 - 5063483 - T 100 -11.4 -5.63103 | opp_overlap 5063483 GGGGAATGAAAAAAA GCTGCC AAT GGCAGC TTTTGCAATTCAGCC TERM 3984 5063483 - 5063497 + T 89 -11.4 -4.19238 | opp_overlap 5063483 GGGGAATGAAAAAAA GCTGCC AAT GGCAGC TTTTGCAATTCAGCC Daci_4605 5064479 - 5063661 - | YaeC family lipoprotein Daci_4606 5064964 - 5064614 - | hypothetical protein TERM 3985 5065214 - 5065157 - R 100 -2.3 -5.77853 | gap 4, opp_overlap 5065170 5065176, overlap 5065165 5065170 5065176 AAGCGCGAAAAAAAA CGAACGTACAAAGCAAAAAGCTCCTGACG TTTC CGTCAGGAGCTTTGCGTTTTG---GT-CG GCGTGGCGGGATTCG TERM 3986 5065210 - 5065165 - R 86 -18.5 -2.70815 | opp_overlap 5065170 5065176, overlap 5065157 5065170 5065176 AAAAAAACGAACGTA CAAAGCAAAAAGCTCCTGACG TTTC CGTCAGGAGCTTTGCGTTTTG GTCGGCGTGGCGGGA TERM 3987 5065170 - 5065205 + r 100 -14.8 -4.26076 | opp_overlap 5065165 5065157 5065170 5065176, overlap 5065176 AACGAACGTACAAAG CAAAAAGCTCCTGACG TTTC CGTCAGGAGCTTTGCG TTTTGGTCGGCGTGG TERM 3988 5065205 - 5065170 - R 87 -17 -2.99216 | opp_overlap 5065170 5065176, overlap 5065165 5065157 5065176 AACGAACGTACAAAG CAAAAAGCTCCTGACG TTTC CGTCAGGAGCTTTGCG TTTTGGTCGGCGTGG TERM 3989 5065176 - 5065199 + r 100 -16.8 -3.94846 | opp_overlap 5065170 5065165 5065157 5065176, overlap 5065170 CGTACAAAGCAAAAA GCTCCTGACG TTTC CGTCAGGAGC TTTGCGTTTTGGTCG TERM 3990 5065199 - 5065176 - R 100 -16.8 -5.04601 | opp_overlap 5065176 5065170, overlap 5065170 5065165 5065157 CGTACAAAGCAAAAA GCTCCTGACG TTTC CGTCAGGAGC TTTGCGTTTTGGTCG TERM 3991 5065355 - 5065329 - R 71 -7.4 -4.18018 | opp_overlap 5065337, overlap 5065330 GGCCTTCAGGGAAAA CGCAGAGATTTT TCA AAAATGTCTGCA AATTCCTGAAATGGC Daci_4607 5068446 - 5065393 - | FAD linked oxidase domain-containing protein TERM 3992 5066571 - 5066542 - G 70 -12.1 -3.2614 | gap 1 CAGGCTGGACAGGAA GGGCTGG-GGCCGC TGC GCGACCTCCAGCAC GTTCACGCCGGCCTG TERM 3993 5068582 - 5068571 - g 77 -4.4 -4.67942 | TGGAACAAACGAAAA TTGC TGCC GCAA ACACTGCATAAAACT Daci_4608 5068500 - 5069498 + | LysR family transcriptional regulator TERM 3994 5069566 - 5069604 + T 78 -10.3 -3.96624 | opp_overlap 5069572, overlap 5069570 5069572 TGGCGATGGCACAAA GAAAAACGGACCACAGC CAGAA GCTGTGGTCCGTATTCA TTTATGGTCGGCGTG TERM 3995 5069570 - 5069600 + T 93 -15.5 -3.63228 | opp_overlap 5069572, overlap 5069566 5069572 GATGGCACAAAGAAA AACGGACCACAGC CAGAA GCTGTGGTCCGTA TTCATTTATGGTCGG TERM 3996 5069598 - 5069572 - T 100 -18.8 -5.38054 | opp_overlap 5069572 5069570 5069566 TGGCACAAAGAAAAA CGGACCACAGCC AGA AGCTGTGGTCCG TATTCATTTATGGTC TERM 3997 5069572 - 5069598 + T 95 -18.1 -3.38986 | opp_overlap 5069572, overlap 5069570 5069566 TGGCACAAAGAAAAA CGGACCACAGC CAGAA GCTGTGGTCCG TATTCATTTATGGTC Daci_4609 5070126 - 5069716 - | MerR family transcriptional regulator TERM 3998 5070271 - 5070242 - R 89 -10.7 -4.56775 | overlap 5070267 ACCCTGTCGTAAAAA CAGCCCATCCACC GCAA GGCAGACAGGCTG ACGACAGCTGGGCCA Daci_4610 5070647 - 5070315 - | integration host factor, alpha subunit Daci_4611 5073128 - 5070681 - | phenylalanyl-tRNA synthetase subunit beta TERM 3999 5070785 - 5070807 + g 72 -6.9 -4.30576 | TGTCGTCATTGCCCA GAGTCAGGC GCACG GCCAGGCTC TTTTCGTCCTGCGCC Daci_4612 5074256 - 5073204 - | phenylalanyl-tRNA synthetase, alpha subunit TERM 4000 5074320 - 5074286 - R 100 -12.3 -4.65933 | gap 1, opp_overlap 5074286 5074290 5074312 GACTGTGAAAAGAAA CAAGGGCTAGCAGCCT TTTC AAGCC-CTAGCCCTTG CTGTTTGCGCTGCAG Daci_4613 5074726 - 5074367 - | 50S ribosomal protein L20 Daci_4614 5074956 - 5074753 - | ribosomal protein L35 TERM 4001 5075083 - 5075057 - R 100 -19.6 -3.62046 | opp_overlap 5075060, overlap 5075060 GGAGGCCGGCAAGAA CAAGGGACATGG AAA CCATGTCCCTTG CATCGCACGCCCCGC TERM 4002 5075080 - 5075060 - R 95 -15.5 -3.9461 | opp_overlap 5075060, overlap 5075057 GGCCGGCAAGAACAA GGGACATGG AAA CCATGTCCC TTGCATCGCACGCCC TERM 4003 5075060 - 5075080 + r 83 -15.5 -3.05384 | opp_overlap 5075060 5075057 GGCCGGCAAGAACAA GGGACATGG AAA CCATGTCCC TTGCATCGCACGCCC Daci_4615 5075777 - 5075160 - | translation initiation factor IF-3 TERM 4004 5075843 - 5075800 - R 81 -13.2 -3.31322 | gap 1, opp_overlap 5075790 5075800 5075801 5075802, overlap 5075802 TTTAAGTTGCTACAA CAGCG-TAGCCGCTTGTGTGC AGT ACACGCAAGCGGCTACCGCCT TTGGAGATGCTCCAT TERM 4005 5075801 - 5075842 + r 93 -16 -3.58343 | gap 1, opp_overlap 5075800 5075802, overlap 5075800 5075790 5075802 TTAAGTTGCTACAAC AGCG-TAGCCGCTTGTGTG CAGTA CACGCAAGCGGCTACCGCC TTTGGAGATGCTCCA TERM 4006 5075841 - 5075802 - R 90 -18 -3.224 | gap 1, opp_overlap 5075800 5075790 5075801 5075802, overlap 5075800 TAAGTTGCTACAACA GCG-TAGCCGCTTGTGTGC AGT ACACGCAAGCGGCTACCGC CTTTGGAGATGCTCC TERM 4007 5075802 - 5075841 + r 88 -19.5 -2.74792 | gap 1, opp_overlap 5075802 5075800, overlap 5075800 5075790 5075801 TAAGTTGCTACAACA GCG-TAGCCGCTTGTGTG CAGTA CACGCAAGCGGCTACCGC CTTTGGAGATGCTCC Daci_4616 5077789 - 5075858 - | threonyl-tRNA synthetase TERM 4008 5075994 - 5076024 + g 70 -3.2 -4.44245 | opp_overlap 5075997, overlap 5075961 5075997 5076021 CCAGCAACAAGGATG TAAGGCAGCTTTTG CAA CGAATGCTCCCGTA TTTTATACGTAATCT TERM 4009 5077859 - 5077840 - R 100 -10.7 -5.0925 | opp_overlap 5077840, overlap 5077834 CCCCAAAAGCAAAAA GCGCGGA GCCAGG TCCGCGC TTTCTTGGGGTCGAG TERM 4010 5077840 - 5077859 + r 84 -10.7 -4.1822 | opp_overlap 5077840 5077834 CCCCAAAAGCAAAAA GCGCGGA GCCAGG TCCGCGC TTTCTTGGGGTCGAG TERM 4011 5078057 - 5078019 - R 95 -16.1 -3.76492 | opp_overlap 5078025, overlap 5078025 TTTAACCCCAGCAAA GAAAAAGCGCCCGAAGC ACAAG GCCCCGGACGCTTTCTC ACCCCTATCTACCTG TERM 4012 5078051 - 5078025 - R 100 -11.5 -5.33405 | opp_overlap 5078025, overlap 5078019 CCCAGCAAAGAAAAA GCGCCCGAAGC ACAAG GCCCCGGACGC TTTCTCACCCCTATC Daci_4617 5079513 - 5078098 - | isocitrate lyase Daci_4618 5079792 - 5080742 + | hypothetical protein Daci_4619 5080959 - 5081258 + | SWIB/MDM2 domain-containing protein TERM 4013 5081305 - 5081288 - f 91 -14.1 -3.77196 | opp_overlap 5081288 CCACGACGGATGAAA GCCGGCC CCTG GGCCGGC TTTTCTTTTTTCCGG TERM 4014 5081288 - 5081305 + F 100 -14.1 -5.42198 | opp_overlap 5081288 CCACGACGGATGAAA GCCGGCC CCTG GGCCGGC TTTTCTTTTTTCCGG Daci_4620 5081322 - 5082503 + | FMN-dependent alpha-hydroxy acid dehydrogenase Daci_4621 5082610 - 5082882 + | BFD/(2Fe-2S)-binding domain-containing protein Daci_4622 5082984 - 5083685 + | TonB family protein Daci_4623 5083701 - 5084423 + | MotA/TolQ/ExbB proton channel TERM 4015 5084504 - 5084480 - g 70 -12.2 -3.33361 | opp_overlap 5084465 GATGAACGAGATCAA CATGACGCCG CTGGT CGACGTCATG CTGGTGCTCCTGATC Daci_4624 5084427 - 5084840 + | biopolymer transport protein ExbD/TolR TERM 4016 5084879 - 5084894 + F 100 -11.8 -5.00412 | opp_overlap 5084879 GGCGATCAACGACAA CGGCCC TTCG GGGCCG TTTTTCATTCTCTTT TERM 4017 5084894 - 5084879 - f 74 -11.8 -3.54029 | opp_overlap 5084879 GGCGATCAACGACAA CGGCCC TTCG GGGCCG TTTTTCATTCTCTTT TERM 4018 5085213 - 5085184 - g 70 -3.6 -4.4715 | gap 2, overlap 5085205 GCTCAATGGACAAAA GGCTGTGACCATCG TGCA CAACGG-CAC-GCC CTACCGCCTGCAGGC Daci_4625 5085041 - 5085262 + | hypothetical protein TERM 4019 5085274 - 5085300 + T 86 -12.3 -3.91541 | gap 1, opp_overlap 5085270 ATAAGCAAGATTCCG GCCGTC-GTCGG ATGC CCGACCGGCGGC TTCTTCGTTTCATCG TERM 4020 5085433 - 5085456 + T 100 -18.2 -5.10461 | opp_overlap 5085433 TTGACCAAAGAAAAA GCCCCTGTGC ATCG GCACAGGGGC TTTTTCTTGGCTGCA TERM 4021 5085456 - 5085433 - T 100 -18.2 -5.33405 | opp_overlap 5085433 TTGACCAAAGAAAAA GCCCCTGTGC ATCG GCACAGGGGC TTTTTCTTGGCTGCA Daci_4626 5085948 - 5085523 - | hypothetical protein Daci_4627 5086121 - 5086813 + | hypothetical protein TERM 4022 5086873 - 5086856 - f 85 -12.7 -3.83026 | opp_overlap 5086856 CTGCCGCACACCAAA GGCCTCC TTCG GGAGGCC TTTTGCATGTCCGGG TERM 4023 5086856 - 5086873 + F 95 -12.7 -4.2349 | opp_overlap 5086856 CTGCCGCACACCAAA GGCCTCC TTCG GGAGGCC TTTTGCATGTCCGGG Daci_4628 5086880 - 5087308 + | hypothetical protein TERM 4024 5087381 - 5087355 - T 89 -10.1 -4.56597 | gap 1, opp_overlap 5087355 TCCGCCCGTCAAAAA GCCGTGGCCGCC CGAG GGCT-CCACGGC TTTTTTCATGGCACG TERM 4025 5087355 - 5087381 + T 100 -10.1 -5.14563 | gap 1, opp_overlap 5087355 TCCGCCCGTCAAAAA GCCGTGGCCGCC CGAG GGCT-CCACGGC TTTTTTCATGGCACG Daci_4629 5088882 - 5087410 - | 23S rRNA 5-methyluridine methyltransferase TERM 4026 5088643 - 5088673 + g 72 -3.8 -4.63592 | overlap 5088644 CTGGGAAGATTCGCG GTGGATGGCCGTCA GGC TGGCGGCTTCCCAG TTGTTTTTCTTGCGA Daci_4630 5089276 - 5088959 - | hypothetical protein TERM 4027 5089382 - 5089396 + H 74 -3.5 -4.77757 | gap 1 CGTCAGGTGCCGCCT CCGCGC TGCA GC-CGG TTTTGATTTTTCAGC Daci_4631 5089464 - 5090024 + | transcriptional regulator-like protein Daci_4632 5090057 - 5090926 + | NAD-dependent epimerase/dehydratase Daci_4633 5090919 - 5091323 + | NAD-dependent epimerase/dehydratase Daci_4634 5091320 - 5091799 + | integral membrane protein-like protein TERM 4028 5091807 - 5091778 - T 73 -10.8 -3.63515 | opp_overlap 5091776 CCTCATGGTCAACAA GCCGATGCTC TGGGGCGGTT GAGCATCGGC AGTACCTTCAGAGCC Daci_4635 5092043 - 5091828 - | TOBE domain-containing protein Daci_4636 5093078 - 5092098 - | ABC transporter related Daci_4637 5093945 - 5093094 - | binding-protein-dependent transport systems inner membrane component Daci_4638 5095117 - 5093957 - | alkanesulfonate monooxygenase TERM 4029 5095195 - 5095172 - R 77 -10.9 -3.64283 | overlap 5095162 CAAAGGGCGGAAGAA GGCCGTGCC GCCGCA GGCTCGGCC AGCCGCGCGTACTCG Daci_4639 5096211 - 5095156 - | aliphatic sulfonate ABC transporter periplasmic ligand-binding protein Daci_4640 5097245 - 5096235 - | aliphatic sulfonate ABC transporter periplasmic ligand-binding protein TERM 4030 5097026 - 5097039 + g 75 -9.5 -4.09685 | GCACGGATACGCCCA GCGGC GCCA GCCGC TTTTCCAGCGTGCCC TERM 4031 5097386 - 5097344 - R 78 -13.4 -3.16742 | gap 1, overlap 5097334 GGGAAGGCGGAGCAA GGGGCGGC-CGCCTGCAGG GCCAGG CCTGCAGACGCGCCGCACG GAGTCGTCAGGTGCT TERM 4032 5097613 - 5097660 + r 81 -13.4 -3.28912 | gap 1, opp_overlap 5097620, overlap 5097620 5097622 TCTGGGACAGCGGGT GAATTCAGTGGGTGGGCGCCGGC CGG GCCGGCGCGC-CGCACTCACTTC TTGGTGTAGATCTGG TERM 4033 5097653 - 5097620 - R 76 -14.5 -2.52676 | gap 1, opp_overlap 5097620 5097613 5097622 CAGCGGGTGAATTCA GTGGGTGGGCGCCGGC CGG GCCGGCGCGC-CGCAC TCACTTCTTGGTGTA TERM 4034 5097620 - 5097657 + r 85 -12.8 -3.78034 | gap 3, opp_overlap 5097620, overlap 5097613 5097622 CAGCGGGTGAATTCA GTG-G-GTGG-GCGCCGGC CGG GCCGGCGCGCCGCACTCAC TTCTTGGTGTAGATC TERM 4035 5097622 - 5097653 + r 78 -15.8 -2.68142 | gap 1, opp_overlap 5097620, overlap 5097620 5097613 GCGGGTGAATTCAGT GGGTGG-GCGCCGGC CGG GCCGGCGCGCCGCAC TCACTTCTTGGTGTA Daci_4641 5098676 - 5097654 - | sulfate ABC transporter, periplasmic sulfate-binding protein TERM 4036 5097821 - 5097839 + g 72 -13.8 -3.15544 | GACGGTAGTAGTTGC GGCCGGCG ATG CGCTGGCC TTCCTCGGAGTACAG TERM 4037 5098995 - 5098979 - g 70 -3.5 -4.4078 | overlap 5098980 5098981 GCTGGTCAACGAAAA CCGCCTG AAC CTGGCCG ACGCACGCGCCCGCC TERM 4038 5099067 - 5099036 - g 73 -7.8 -4.2349 | CCGCCAGATGGAAAA CCACTTCTTCGGCG GCGG CGCCGATGCGGCGG CCGGCTACGTGCCTC Daci_4642 5098821 - 5099093 + | hypothetical protein TERM 4039 5099113 - 5099141 + F 100 -23.1 -4.07246 | CTTCGCGCCCTTTCA CCGCCCCCGTCGC ACC GCGCCGGGGGCGG TTTCATTTGCGGTGC Daci_4643 5099266 - 5099934 + | hypothetical protein Daci_4644 5099944 - 5101881 + | tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC TERM 4040 5103612 - 5103638 + G 74 -13.6 -3.28924 | overlap 5103597 AGCGGCTCGCCCTGG CAGGGCGGCCAG GGC CAGGCCGCGCTG TTCTACAGCCGCGTG Daci_4645 5102073 - 5104154 + | TonB-dependent receptor Daci_4646 5104177 - 5105052 + | hypothetical protein Daci_4647 5105086 - 5105634 + | molybdenum ABC transporter ATP-binding protein TERM 4041 5105865 - 5105843 - g 79 -14.9 -3.32844 | opp_overlap 5105835 GCTGGCACCGCACAA GCTGCTGGG CTGGC CCCAGCAGC TGGACGATGTCTCGC Daci_4648 5105640 - 5106701 + | periplasmic binding protein Daci_4649 5106701 - 5107714 + | transport system permease protein Daci_4650 5107716 - 5108501 + | ABC transporter related Daci_4651 5109541 - 5108498 - | hypothetical protein TERM 4042 5108826 - 5108844 + g 74 -11.6 -3.71649 | overlap 5108839 CAGTCGGCATCTCGC GACGGGGC ATC GCCCCGCC TTTCGGGTTTGCAGG Daci_4652 5109747 - 5111636 + | nitrite/sulfite reductase hemoprotein beta subunit Daci_4653 5111665 - 5112048 + | hypothetical protein Daci_4654 5112050 - 5112808 + | phosphoadenylyl-sulfate reductase (thioredoxin) Daci_4655 5112832 - 5113782 + | sulfate adenylyltransferase subunit 2 Daci_4656 5113782 - 5115173 + | sulfate adenylyltransferase, large subunit TERM 4043 5115190 - 5115222 + F 93 -15.6 -3.53012 | gap 1, opp_overlap 5115179, overlap 5115192 CAACTGGACAGTCCC GCTTCGCGAGCCGGC ACAT GCCGGCTCGTGG-GC TTTCGGAAAACCGCA TERM 4044 5115192 - 5115221 + F 79 -15.7 -2.71712 | opp_overlap 5115179, overlap 5115190 ACTGGACAGTCCCGC TTCGCGAGCCGGC ACAT GCCGGCTCGTGGG CTTTCGGAAAACCGC Daci_4657 5115338 - 5115667 + | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein TERM 4045 5116673 - 5116662 - g 72 -3.6 -4.59773 | CTGCAGGGCGAAAAA CCGC TGCT GCAG TACACGACGACCAGC Daci_4658 5115681 - 5116733 + | FAD-dependent pyridine nucleotide-disulphide oxidoreductase TERM 4046 5116944 - 5116934 - g 75 -8.2 -4.1899 | GCATGTCACGCAAAA CGGC AAG GCCG AGAAGGTCAGCCACG Daci_4659 5116806 - 5117093 + | hypothetical protein TERM 4047 5117119 - 5117096 - T 100 -16.8 -3.54424 | opp_overlap 5117100 5117103, overlap 5117100 CTGGATCCTTTGAAA GAAACCGGGC CTGG GCCCGGTTTC ATCGATCATCCATCC TERM 4048 5117100 - 5117115 + T 80 -11.8 -3.77196 | opp_overlap 5117096 5117100, overlap 5117103 ATCCTTTGAAAGAAA CCGGGC CTGG GCCCGG TTTCATCGATCATCC TERM 4049 5117115 - 5117100 - T 93 -11.8 -4.41616 | opp_overlap 5117100 5117103, overlap 5117096 ATCCTTTGAAAGAAA CCGGGC CTGG GCCCGG TTTCATCGATCATCC Daci_4660 5117993 - 5117139 - | phosphatidylserine decarboxylase Daci_4661 5118444 - 5118692 + | translation initiation factor IF-1 TERM 4050 5118733 - 5118745 + F 75 -7.7 -4.25283 | TACCCATTTTTTTGA CGCTA CAA TAGCG TTTTAGTCGGAGCGT TERM 4051 5118839 - 5118864 + F 100 -17.7 -4.30719 | opp_overlap 5118839 CGACCAATGAATCAA GGGGTTAGCTC GAAA GAGCTAACCCC TTTCTTCTAACCAAA TERM 4052 5118864 - 5118839 - f 100 -17.7 -3.46824 | opp_overlap 5118839 CGACCAATGAATCAA GGGGTTAGCTC GAAA GAGCTAACCCC TTTCTTCTAACCAAA TERM 4053 5118959 - 5118911 - f 85 -8.8 -4.63542 | gap 1, opp_overlap 5118917, overlap 5118917 CAGAAGCCGCAAAAA GACAAAGCCCCCTCGGC-GCCAT CATC ACGGCTGCTTAGGGGGCTTTCGC GCTTCTGGGATCAAC TERM 4054 5118917 - 5118953 + F 73 -10.8 -3.62591 | gap 1, opp_overlap 5118911 5118917 CCGCAAAAAGACAAA GCCCCCTCGGC-GCCAT CATC ACGGCTGCTTAGGGGGC TTTCGCGCTTCTGGG TERM 4055 5118953 - 5118917 - f 89 -10.8 -4.55887 | gap 1, opp_overlap 5118917, overlap 5118911 CCGCAAAAAGACAAA GCCCCCTCGGC-GCCAT CATC ACGGCTGCTTAGGGGGC TTTCGCGCTTCTGGG Daci_4662 5119203 - 5119562 + | hypothetical protein Daci_4663 5119627 - 5120175 + | putative neutral zinc metallopeptidase TERM 4056 5120213 - 5120184 - f 100 -11.5 -5.48213 | gap 1 CACTTAAAAGAAAAA GCCCACGAAGTGCT TCC AACACCTCG-GGGC TCTGACGATGAAGAG Daci_4664 5120578 - 5120802 + | hypothetical protein TERM 4057 5120875 - 5120851 - T 70 -9.9 -3.51076 | opp_overlap 5120851, overlap 5120847 CGACCACAGAATCAA GGGGTTAGCTC GAA GGGCTAGCCCC TTTCTTCTAACCAAA TERM 4058 5120851 - 5120875 + T 100 -14.3 -4.30719 | opp_overlap 5120847 5120851 CGACCACAGAATCAA GGGGTTAGCTC GAA GGGCTAGCCCC TTTCTTCTAACCAAA TERM 4059 5120967 - 5120922 - T 100 -15.5 -4.63542 | opp_overlap 5120928, overlap 5120912 5120928 CAGAAGTCTCAAAAA GACAAAGCCCCCTCGGCACCT TCAC AGATGTCGAGGGGGCTTTTTT GCGCTTGGGGGCCTA TERM 4060 5120961 - 5120928 - T 100 -18.9 -4.55887 | opp_overlap 5120928, overlap 5120922 TCTCAAAAAGACAAA GCCCCCTCGGCACCT TCAC AGATGTCGAGGGGGC TTTTTTGCGCTTGGG TERM 4061 5120928 - 5120961 + T 100 -18.9 -5.09426 | opp_overlap 5120922 5120928 TCTCAAAAAGACAAA GCCCCCTCGGCACCT TCAC AGATGTCGAGGGGGC TTTTTTGCGCTTGGG Daci_4665 5121727 - 5121029 - | hypothetical protein Daci_4666 5121781 - 5122059 + | hypothetical protein Daci_4667 5122059 - 5122277 + | hypothetical protein Daci_4668 5122287 - 5122535 + | hypothetical protein Daci_4669 5124803 - 5124522 - | hypothetical protein Daci_4670 5125607 - 5124996 - | glycoside hydrolase family protein Daci_4671 5125906 - 5125604 - | hypothetical protein Daci_4672 5126349 - 5125915 - | hypothetical protein Daci_4673 5127155 - 5126355 - | loricrin-like protein Daci_4674 5128168 - 5127152 - | hypothetical protein TERM 4062 5127889 - 5127929 + g 76 -13.2 -3.53224 | gap 1, overlap 5127890 ATGCAGCAGTTGCAG AGCCGGCCGAAGCCGCAGC GCTA GCGGCTGCTTCG-CCGGCC TTTGCCACGGAGGTG TERM 4063 5127890 - 5127928 + g 74 -16.7 -2.71791 | gap 1, overlap 5127889 TGCAGCAGTTGCAGA GCCGGCCGAAGCCGCAGC GCTA GCGGCTGCTTCG-CCGGC CTTTGCCACGGAGGT Daci_4675 5129115 - 5128165 - | hypothetical protein Daci_4676 5133941 - 5129112 - | hypothetical protein TERM 4064 5131760 - 5131717 - G 72 -5.3 -4.41348 | gap 2, overlap 5131718 5131719 GGTGCGCCAAACAAA CTG-CCCAGGGCACCG-CCAG CGAT CTGGACCGTGGCCTGGATCAA CGGCTTGAACACCAG TERM 4065 5133799 - 5133785 - G 75 -5.6 -4.57837 | overlap 5133786 ACACGCCGGCAAAAA CGCCAC CGA GCAGCG TGCCCAGGCGCCCGA Daci_4677 5134412 - 5133957 - | hypothetical protein Daci_4678 5134891 - 5134421 - | hypothetical protein Daci_4679 5135595 - 5134927 - | hypothetical protein Daci_4680 5136078 - 5135608 - | hypothetical protein Daci_4681 5136388 - 5136080 - | hypothetical protein Daci_4682 5136762 - 5136406 - | putative RecA/RadA recombinase Daci_4683 5138885 - 5136804 - | peptidase U35 phage prohead HK97 Daci_4684 5140441 - 5138939 - | lambda family phage portal protein Daci_4685 5140674 - 5140444 - | hypothetical protein Daci_4686 5141082 - 5140702 - | resolvase domain-containing protein Daci_4687 5143184 - 5141088 - | terminase GpA TERM 4066 5141624 - 5141643 + g 74 -12.1 -3.63276 | overlap 5141618 GGTCCTGCATGCTGG CCGGCCC CACGAT GGGCCGG TTGTCGTTGTTGTCG Daci_4688 5143723 - 5143181 - | hypothetical protein TERM 4067 5143810 - 5143798 - R 76 -5.5 -4.58283 | CAAGGGGGCCAAAAA GGACC CGC GATCC TGCCTATTTTTTAAG Daci_4689 5144939 - 5143869 - | hypothetical protein Daci_4690 5145305 - 5144964 - | hypothetical protein Daci_4691 5146183 - 5145335 - | hypothetical protein TERM 4068 5146051 - 5146033 - G 75 -4.5 -4.56597 | TGGGTCTGTCAAAAA CGTTCTG CATTT CAGAGCG CATGGAATTCTTGAC Daci_4692 5146709 - 5146173 - | hypothetical protein Daci_4693 5146716 - 5146979 + | hypothetical protein TERM 4069 5147135 - 5147148 + G 81 -2.3 -4.98531 | GAATGGGAACTTGAA CTACC TGCT GGAAG TTTTTGGTTTCCACC Daci_4694 5147108 - 5147692 + | hypothetical protein Daci_4695 5147710 - 5148021 + | hypothetical protein Daci_4696 5148268 - 5148026 - | hypothetical protein Daci_4697 5148542 - 5148946 + | hypothetical protein TERM 4070 5149265 - 5149283 + T 77 -11.7 -3.57561 | GGGCACCACGGCATC GACCGGG CAAGC CCCGGTC TTTCAAAAGTTGCAC TERM 4071 5149476 - 5149455 - T 85 -6.5 -4.79752 | overlap 5149457 GCCAAGAACAGAAAA CCCCAGCCA GAGA TGGCTGACG GCCCGGAAAGAACGG TERM 4072 5149526 - 5149502 - T 100 -12.8 -5.08088 | overlap 5149489 AACGGGCAATAAAAA GGCCCGGCAC TTAAG GTGCTGGGCC TGTCAATGACGCTGT Daci_4698 5150907 - 5149576 - | hypothetical protein Daci_4699 5151452 - 5151703 + | hypothetical protein TERM 4073 5151715 - 5151686 - f 85 -15.7 -3.14211 | opp_overlap 5151690, overlap 5151690 ACCTTCTTTGACCAA CCAACGGCCCGCC ACTG AGCGGGCCGTTTG CATGCCGGAGACCCA TERM 4074 5151690 - 5151711 + F 90 -14.4 -3.64703 | opp_overlap 5151690 5151686 TCTTTGACCAACCAA CGGCCCGC CACTGA GCGGGCCG TTTGCATGCCGGAGA TERM 4075 5151711 - 5151690 - f 86 -15.1 -3.39895 | opp_overlap 5151690, overlap 5151686 TCTTTGACCAACCAA CGGCCCGCC ACTG AGCGGGCCG TTTGCATGCCGGAGA TERM 4076 5151951 - 5151929 - g 70 -12 -3.33696 | GCCCGCCGCAACCAA GCTCCAGCAG ATC CCGCTGGAAC TGCCATCCCTCTGAT Daci_4700 5151732 - 5151965 + | hypothetical protein Daci_4701 5151999 - 5152655 + | hypothetical protein TERM 4077 5152810 - 5152798 - gf 78 -6.9 -4.56597 | overlap 5152799 CCTGGGCGTGAAAAA GGCAC CCG GCGCC AAGACCCTGCGCACC Daci_4702 5152652 - 5153491 + | hypothetical protein Daci_4703 5153451 - 5153804 + | hypothetical protein TERM 4078 5154907 - 5154917 + F 73 -4.6 -4.63527 | GCCCGTTTAGCAGTC GCCT CTC GGGC TTTTTGCACTCATGC Daci_4704 5154929 - 5155789 + | D12 class N6 adenine-specific DNA methyltransferase Daci_4705 5156350 - 5155856 - | hypothetical protein TERM 4079 5156352 - 5156336 - G 72 -3.7 -4.58585 | TATCCAAATAACAAA GAACGAC ATC ATCATTC CCGCTGCAATGGCCG Daci_4706 5157449 - 5156514 - | hypothetical protein TERM 4080 5157497 - 5157512 + H 95 -11.8 -4.72272 | ATTTGTCCTGACATC GCCCGC ATTC GCGGGC TTTTTCATGCCCCCC TERM 4081 5157547 - 5157571 + H 78 -7.2 -4.58395 | gap 1, overlap 5157550 5157551 TGCCCGACCCAACCC CAGA-GCCAGC ACCT GCTGGCCTTTG TTTTTGAAAGGTGCC TERM 4082 5157550 - 5157567 + H 85 -6.9 -4.85782 | overlap 5157547 5157551 CCGACCCAACCCCAG AGCCAGC ACCT GCTGGCC TTTGTTTTTGAAAGG TERM 4083 5157551 - 5157566 + H 70 -10.4 -3.50746 | overlap 5157550 5157547 CGACCCAACCCCAGA GCCAGC ACCT GCTGGC CTTTGTTTTTGAAAG Daci_4707 5157591 - 5157821 + | hypothetical protein TERM 4084 5158511 - 5158500 - g 71 -2.2 -4.58395 | overlap 5158504 TCCAGCCGGCAAAAA CCGA GGGC TCGA CCGGCGCCCAGGTCC Daci_4708 5157818 - 5158846 + | integrase family protein TERM 4085 5159037 - 5159012 - f 82 -14.7 -3.17054 | opp_overlap 5159012, overlap 5159004 GACCAAATGATTCAA GCCCCTGGTTC GAAA GAGCCAGGGGC TTTTGTCTGTCCAGA TERM 4086 5159012 - 5159037 + F 100 -16.9 -4.60797 | opp_overlap 5159012 5159004 GACCAAATGATTCAA GCCCCTGGTTC GAAA GAGCCAGGGGC TTTTGTCTGTCCAGA Daci_4709 5159260 - 5159694 + | putative lipoprotein TERM 4087 5159743 - 5159712 - T 88 -13.8 -3.62046 | gap 1, opp_overlap 5159717, overlap 5159713 5159717 CCAGTCCTTCAACAA CCAAAGCCCG-CAGG AAA CCTGGCGGGCTTTGT CACGCAGGGCGCCAA TERM 4088 5159742 - 5159713 - T 84 -17.3 -2.77013 | gap 1, opp_overlap 5159717, overlap 5159712 5159717 CAGTCCTTCAACAAC CAAAGCCCG-CAGG AAA CCTGGCGGGCTTTG TCACGCAGGGCGCCA TERM 4089 5159738 - 5159717 - T 89 -12.3 -4.07618 | gap 1, opp_overlap 5159717, overlap 5159713 5159712 CCTTCAACAACCAAA GCCCG-CAGG AAA CCTGGCGGGC TTTGTCACGCAGGGC TERM 4090 5159717 - 5159738 + T 86 -12.3 -3.85698 | gap 1, opp_overlap 5159717 5159713 5159712 CCTTCAACAACCAAA GCCCG-CAGG AAA CCTGGCGGGC TTTGTCACGCAGGGC Daci_4710 5160389 - 5159766 - | glutathione S-transferase domain-containing protein Daci_4711 5160491 - 5160955 + | ribonuclease H Daci_4712 5161341 - 5161015 - | hypothetical protein TERM 4091 5161570 - 5161553 - R 100 -12.7 -5.252 | opp_overlap 5161553 CATTCCCAGAAAAAA GCCCGCT CCAC AGCGGGC TTTTTGCATTGCACG TERM 4092 5161553 - 5161570 + r 100 -12.7 -4.74103 | opp_overlap 5161553 CATTCCCAGAAAAAA GCCCGCT CCAC AGCGGGC TTTTTGCATTGCACG TERM 4093 5161798 - 5161825 + r 100 -19.8 -5.4505 | opp_overlap 5161786 GAACGCTCCATTCAG CGCCCCGGCCGC CTCC GCAGCCGGGGCG TTTTTTCTTGAGCGG TERM 4094 5162280 - 5162308 + r 100 -20.3 -4.07687 | opp_overlap 5162280 GCCCCAATGCAAAAA GCCCGGCCTGCAC GTG GTGCAGACCGGGC TTTTCACGGCAGCAT TERM 4095 5162308 - 5162280 - R 100 -22.5 -4.74103 | opp_overlap 5162280 GCCCCAATGCAAAAA GCCCGGCCTGCAC GTG GTGCAGACCGGGC TTTTCACGGCAGCAT Daci_4713 5166177 - 5162323 - | endonuclease/exonuclease/phosphatase TERM 4096 5164377 - 5164330 - G 87 -4.9 -5.1861 | gap 3, overlap 5164332 GGCAGCATCAAAAAA CTGGTCGAGCACGCCGATGACGCG ATC CACGCCATCGCCA-GCCCG-C-AG CGTGTTGGACGCCGA TERM 4097 5166186 - 5166163 - G 82 -3.7 -4.96435 | GCAATAAAAAAACAA TGCGCTCCC CCCCAT GGTTGCGCA ACTCCCGGTTTATCG TERM 4098 5166408 - 5166428 + H 100 -14 -5.06414 | opp_overlap 5166388 GGCTCTTTCTTCCCA GGCCAGCG CAAGC CGCTGGCC TTTTTCTTGGGCGCA Daci_4714 5166599 - 5166895 + | histone family protein nucleoid-structuring protein H-NS Daci_4715 5166992 - 5167210 + | hypothetical protein TERM 4099 5167343 - 5167311 - T 100 -17.8 -5.81412 | opp_overlap 5167311 TGCAGGCAAAAAAAA CCGCCACACGCTGA GGTCA TCAGTGTGTGGCGG TGTCTTGGATGGTGG TERM 4100 5167311 - 5167343 + T 95 -20 -3.11316 | opp_overlap 5167311 TGCAGGCAAAAAAAA CCGCCACACGCTGA GGTCA TCAGTGTGTGGCGG TGTCTTGGATGGTGG Daci_4716 5168408 - 5167743 - | phosphoglycolate phosphatase TERM 4101 5167932 - 5167918 - G 71 -2.1 -4.64844 | gap 1, overlap 5167920 CCCACATAGACAAAA CACTGC GGGG GCAG-G CCGATACGCGCGGCA Daci_4717 5169136 - 5168414 - | 3-demethylubiquinone-9 3-methyltransferase TERM 4102 5169182 - 5169197 + r 84 -11.8 -4.07568 | opp_overlap 5169182 TCGGCCATAAAAAAA GCCCCG TTGC CGGGGC TTTTGCGGGAAGCAA TERM 4103 5169197 - 5169182 - R 100 -11.8 -5.60993 | opp_overlap 5169182 TCGGCCATAAAAAAA GCCCCG TTGC CGGGGC TTTTGCGGGAAGCAA Daci_4718 5169880 - 5169221 - | OmpA/MotB domain-containing protein TERM 4104 5169920 - 5169902 - H 76 -6.6 -4.56597 | opp_overlap 5169902, overlap 5169903 5169904 CCTCTTGGGGAAAAA GCCGCAGC AGG GCTGCGAA TCTGTGGACGTTATC TERM 4105 5172457 - 5172410 - g 70 -12 -3.35996 | gap 1, overlap 5172388 5172445 CACGGCCACCGAGAA CGGCTACGGCAAGCGCACCTCCA TCG TGGAG-TACACGCGCCATGGCCG CGGCACCAAGGGCAT Daci_4719 5170110 - 5172776 + | DNA gyrase subunit A TERM 4106 5172779 - 5172837 + F 100 -18.1 -4.62471 | gap 2, overlap 5172780 CGAGCCCGCCTGATG ACCCAGCCGCCGCTGGGGCT--GCTCCCG CAC CGGGAGCGCAGTCCCAGCGGCGGCCCAGA TTTTTGACAGTTGCA TERM 4107 5172780 - 5172836 + F 100 -21.6 -3.37 | gap 2, overlap 5172779 GAGCCCGCCTGATGA CCCAGCCGCCGCTGGGGCT--GCTCCCG CAC CGGGAGCGCAGTCCCAGCGGCGGCCCAG ATTTTTGACAGTTGC Daci_4720 5172899 - 5174008 + | phosphoserine aminotransferase Daci_4721 5174028 - 5175128 + | chorismate mutase Daci_4722 5175128 - 5176006 + | prephenate dehydrogenase TERM 4108 5176050 - 5176103 + F 71 -8.7 -3.76839 | gap 1, opp_overlap 5176037 5176053, overlap 5176052 5176053 AAGCCCGGCGCACCC AAAGCGCTCCTG-GGCATTGCGGCCG GCG CGGCCGCAATGCCTCCCGACAGCCTG TTTGCCTTCGAATTG TERM 4109 5176052 - 5176101 + F 74 -11.3 -3.46336 | gap 1, opp_overlap 5176037 5176053, overlap 5176050 5176053 GCCCGGCGCACCCAA AGCGCTCCTG-GGCATTGCGGCCG GCG CGGCCGCAATGCCTCCCGACAGCC TGTTTGCCTTCGAAT TERM 4110 5176053 - 5176100 + F 76 -14.8 -2.6732 | gap 1, opp_overlap 5176037 5176053, overlap 5176052 5176050 CCCGGCGCACCCAAA GCGCTCCTG-GGCATTGCGGCCG GCG CGGCCGCAATGCCTCCCGACAGC CTGTTTGCCTTCGAA TERM 4111 5176100 - 5176053 - f 90 -14.8 -3.64703 | gap 1, opp_overlap 5176053 5176052 5176050, overlap 5176037 CCCGGCGCACCCAAA GCGCTCCTG-GGCATTGCGGCCG GCG CGGCCGCAATGCCTCCCGACAGC CTGTTTGCCTTCGAA Daci_4723 5176121 - 5178148 + | bifunctional 3-phosphoshikimate 1-carboxyvinyltransferase/cytidine monophosphate kinase TERM 4112 5178174 - 5178125 - f 78 -13.5 -3.14132 | gap 1, opp_overlap 5178112 TCGTGGTGGCAGGAA CGCCAGCCGTTCGGCCGCGACTGA TTG CCAGTTGCG-CCGCACGGTCGGCA AACCCGCCCTCCGGG TERM 4113 5178306 - 5178286 - f 73 -9 -3.88559 | gap 1 AAGCAGTCCTAGAAA CGCCTGGCA ATAG TGCC-GGCG GAAACCTGTTTGCGG TERM 4114 5180014 - 5179959 - g 75 -6.8 -4.4078 | gap 2, overlap 5179960 GTCGGCCAAGGAAAA CGCCGGCA-CGACCAGCCTGG-GCGC CCTGCT GCGCGCCAAGCTGGACAACTCCGACA AGTAATCAGCAGCCA Daci_4724 5178334 - 5180019 + | 30S ribosomal protein S1 TERM 4115 5180045 - 5180020 - f 74 -11.9 -3.4489 | overlap 5180016 AACTCCGACAAGTAA TCAGCAGCCAG TCTG CTGACCGCTGA AGGTCGGATGCGACG TERM 4116 5180054 - 5180084 + F 100 -19.1 -3.54919 | gap 1, overlap 5180054 CCGCTGAAGGTCGGA T-GCGACGGGCGCC TCCG GGCGCCCGTCGCCA TTTCAACCCCTGATT TERM 4117 5180054 - 5180083 + F 95 -20.7 -2.7263 | overlap 5180054 CCGCTGAAGGTCGGA TGCGACGGGCGCC TCCG GGCGCCCGTCGCC ATTTCAACCCCTGAT Daci_4725 5180110 - 5180451 + | integration host factor, beta subunit TERM 4118 5180494 - 5180454 - f 70 -10.2 -3.53012 | CCCTGCCGCCTGAAA GCGGGCTGACCGGCTGCG CGCGC CGCAGCCGCCCTCTCCGC CAGGCTCTAGAATCG TERM 4119 5180547 - 5180565 + G 100 -8.8 -5.79526 | opp_overlap 5180529 ATGAAGTACTTCCTG TGGCTGCT CAA GGCGGCCA TTTTTTTTACGCTGT Daci_4726 5180532 - 5180852 + | hypothetical protein Daci_4727 5180842 - 5182017 + | hypothetical protein TERM 4120 5182684 - 5182653 - g 83 -15 -3.54741 | overlap 5182638 5182654 GACCAGGCCGCCAAA CCGGCCACGCCGGC CAAG GCCGGCGCGGCCTC CTGAGTACGCCAACT TERM 4121 5182683 - 5182654 - g 81 -18.5 -2.7263 | overlap 5182638 5182653 ACCAGGCCGCCAAAC CGGCCACGCCGGC CAAG GCCGGCGCGGCCT CCTGAGTACGCCAAC Daci_4728 5182278 - 5182688 + | hypothetical protein TERM 4122 5182712 - 5182725 + F 100 -9.5 -4.75372 | opp_overlap 5182712 ACTGTCTCTATCCAA CCCGC TTCG GCGGG TTTTTCATGCGTACT TERM 4123 5183130 - 5183151 + G 86 -4.4 -5.14894 | gap 2, overlap 5183129 GCGCTACTACATGTC GC-CGGC-CG ATCC CGTGCCGCGC TTTTTCTCGTTTTTT TERM 4124 5183971 - 5183921 - g 79 -18.9 -2.62184 | GCCTGCGCCACATGA TGCCCATCACGGCCACGCTGGCC TGCGT GGCCAGTGCGGCCATGGCGGGCG TGCCGCTGCTCAACG Daci_4729 5182828 - 5185806 + | putative monovalent cation/H+ antiporter subunit A Daci_4730 5185806 - 5186171 + | putative monovalent cation/H+ antiporter subunit C TERM 4125 5187863 - 5187844 - g 76 -7 -4.30995 | overlap 5187841 CCCGGCAGAAAAGAA GGCCCGCC TGGA AGCCGGCC CCGAAGGCGCGGCAC Daci_4731 5186168 - 5187964 + | putative monovalent cation/H+ antiporter subunit D Daci_4732 5187961 - 5188452 + | putative monovalent cation/H+ antiporter subunit E Daci_4733 5188449 - 5188727 + | multiple resistance and pH regulation protein F Daci_4734 5188724 - 5189107 + | Na+/H+ antiporter subunit TERM 4126 5189322 - 5189305 - f 72 -12.7 -3.06915 | opp_overlap 5189302 5189308 5189309 ACGCATTTGATGGAA CGGCCAC AGGC GTGGCCG CCCTGGGTTTTTCTG TERM 4127 5189309 - 5189329 + F 80 -3.2 -5.03994 | gap 1, opp_overlap 5189305, overlap 5189302 5189308 ATTTGATGGAACGGC CACA-GGCG TGGC CGCCCTGGG TTTTTCTGTGTACGA Daci_4735 5189351 - 5190220 + | hypothetical protein TERM 4128 5190239 - 5190268 + T 100 -17.2 -4.86621 | opp_overlap 5190256 GCCGCCGCTTCGCAA GGCGATCTGCGC ACCAAG GCGCAGGTCGCC TTTTTCATTCCGGCT Daci_4736 5191454 - 5190273 - | major facilitator transporter Daci_4737 5192985 - 5191456 - | hypothetical protein Daci_4738 5194064 - 5193057 - | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding TERM 4129 5193389 - 5193411 + g 72 -5.4 -4.4773 | overlap 5193388 5193392 TCATCCTGGCGATCT CGGCCGCGCC TAT GGTGTGGTGG TTTTCCTTGGTGTAG Daci_4739 5195529 - 5194102 - | putative transmembrane protein Daci_4740 5196811 - 5195591 - | nicotinate phosphoribosyltransferase Daci_4741 5197388 - 5196927 - | thioesterase superfamily protein TERM 4130 5197506 - 5197491 - H 78 -4.7 -4.81851 | ATGCAAACCGAAAAA TGTCG TCAAAC CGACA TAAAACCAATTCAAA TERM 4131 5197677 - 5197695 + H 72 -2.4 -4.83615 | gap 1, overlap 5197680 CAATTCCCCGTAACC CGAGACC CCCTGT GGTC-CG TTTTTCTGGAGACTG TERM 4132 5197776 - 5197751 - g 75 -6.7 -4.4009 | overlap 5197765 CCTGAGCGCACAAAA GGCCAACCTGG AAAC CCTGTTCGGCC TGACGAGCAAGGCCT TERM 4133 5198207 - 5198162 - g 90 -14 -4.08216 | overlap 5198198 CGAGTCGGTGCAAAA GGCCGTCAAGCAGGCTTCGG ACCTGG CGGAAGCCAACTTCACGGCC GTGACCAACACCGCC Daci_4742 5197713 - 5198261 + | phasin family protein TERM 4134 5198413 - 5198396 - f 74 -11.3 -3.54424 | opp_overlap 5198396 CTGGATCCTTTCAAA CCCAGTC TTTG GACTGGG TTTTTTTTCGTGCGC TERM 4135 5198396 - 5198413 + F 100 -11.3 -5.86061 | opp_overlap 5198396 CTGGATCCTTTCAAA CCCAGTC TTTG GACTGGG TTTTTTTTCGTGCGC TERM 4136 5199592 - 5199573 - g 74 -13.6 -3.30452 | overlap 5199566 5199564 CAAGAACATGACCAA GGTCCAGC AAAT GCTGGACC GTGCCGGGTTCCAGT Daci_4743 5198563 - 5199609 + | extracellular solute-binding protein TERM 4137 5199631 - 5199647 + F 100 -15.1 -5.06414 | opp_overlap 5199610 TCGCGCCCATCACCA GCCCGGC ACT GCCGGGC TTTTTCTTGGGCGCG Daci_4744 5199741 - 5200499 + | short-chain dehydrogenase/reductase SDR TERM 4138 5200587 - 5200632 + T 70 -3.8 -4.62069 | overlap 5200585 GGCGGGGCGGCGCGG CCGGCATAGGCCC-TTGCTCGG TGTC CCTCGCTTTGGGCC-GTGCCGG TTTTTGAGATACGCG Daci_4745 5201507 - 5200653 - | hypothetical protein Daci_4746 5203244 - 5201529 - | cyclic peptide transporter TERM 4139 5202461 - 5202426 - G 72 -14 -3.23692 | gap 1, overlap 5202408 5202410 5202413 5202427 CAGCACCAGCACGAA GCCGCTGAGCACCACGG GCT CGGTGGTGCGCAGCG-C GGCCCAGCCCAGGAT TERM 4140 5203390 - 5203367 - H 95 -11.8 -4.56597 | TGCGTGCGCCAAAAA TGTTCACCGC CCAG GCGATGAACA AATTCCGCCGCCCTG TERM 4141 5203454 - 5203421 - H 76 -10.2 -3.75024 | gap 1, opp_overlap 5203423 5203429 CGTCATCACGAAGAA GGGGCAGCGC-GGGC GCCAT GCCCTGCACCGGCCC GCTTTGCCTTGTCTG TERM 4142 5203423 - 5203462 + H 70 -10.6 -3.48276 | gap 1, opp_overlap 5203421, overlap 5203429 TCATCACGAAGAAGG GGCAGCGCGGGCGCCATGC CCT GCACCG-GCCCGCTTTGCC TTGTCTGCCGCACAC Daci_4747 5203490 - 5204455 + | alpha/beta hydrolase domain-containing protein Daci_4748 5204515 - 5205717 + | hypothetical protein Daci_4749 5205729 - 5207027 + | L-lysine 6-monooxygenase (NADPH) TERM 4143 5207123 - 5207180 + F 100 -16.9 -3.58726 | overlap 5207124 ACCTGCGCCGCTGAA TCCCATACCCGCTGCTGCAACCCCGGC CCTG GCCGGGGTTGCAGCATCCGGTAGGCCC TTCTCTGTACGGACC TERM 4144 5207124 - 5207179 + F 95 -20.4 -2.75022 | overlap 5207123 CCTGCGCCGCTGAAT CCCATACCCGCTGCTGCAACCCCGGC CCTG GCCGGGGTTGCAGCATCCGGTAGGCC CTTCTCTGTACGGAC Daci_4750 5207240 - 5207839 + | ECF subfamily RNA polymerase sigma-24 factor TERM 4145 5208611 - 5208668 + G 74 -16.9 -2.73875 | gap 1, overlap 5208636 ATCCGCAACGGCCAG GCCGAGGCCGTGCGCCAGGCCGATGCCG CCA CGCTGTCCGCCTGGCGCGAGGGCT-GGC TGGTCTTCGAGAACA Daci_4751 5207852 - 5208886 + | anti-FecI sigma factor, FecR TERM 4146 5208946 - 5208917 - T 100 -21.5 -4.99043 | CCCCGACAAAGAAAA GGCCACGGCCGGA TCGC TCCAGCCGTGGCC CATGGACCATGCCCG Daci_4752 5211362 - 5208963 - | TonB-dependent siderophore receptor TERM 4147 5209670 - 5209690 + g 78 -6.1 -4.5442 | gap 1, overlap 5209686 GATAGACCACGCCCA GC-CGGCC CGTGAA GGCCGAGC TTTTCTCATTGGCCG TERM 4148 5211540 - 5211501 - R 100 -7.7 -5.52986 | gap 1, overlap 5211502 ATTTCACGAAAAAAA CCGGGATGGGACGGGGGC GTCCT GCCCCCGTCCC-CGGCGC CCGTCAGTCCAGCGC TERM 4149 5211539 - 5211502 - R 82 -11.2 -3.90707 | gap 1, overlap 5211501 TTTCACGAAAAAAAC CGGGATGGGACGGGGGC GTCCT GCCCCCGTCCC-CGGCG CCCGTCAGTCCAGCG Daci_4753 5230074 - 5211544 - | amino acid adenylation domain-containing protein TERM 4150 5216797 - 5216746 - G 74 -12.8 -3.66178 | gap 1, opp_overlap 5216788 CGCCGTAAGGCGAAA GCG-CAGGCGCAGGCTGTCGTGCCG GGC CAGCAGGTCGGCCAGGGCCTGGCGC AGCGGCGCAGACTGC TERM 4151 5217602 - 5217592 - G 70 -8.2 -3.85698 | GGGGTCGGCGACAAA GCGC TCC GCGC TGAGCCCTGCCCGGT TERM 4152 5223668 - 5223638 - G 72 -5.2 -4.44046 | CCCAGCTCAAAGAAA TGGTCCTGGCGCCC CAC GCGCTCCACGCCCA GCACCTCGCTCCAGA TERM 4153 5228778 - 5228812 + g 82 -16.4 -3.39327 | TGGCGTGCAGGGTCA GCTCGAACTGGGCGGC CAG GCCGTCCAGCTCCAGC TTCTGGATCTCCAGG TERM 4154 5229972 - 5229994 + g 73 -7.6 -4.13767 | opp_overlap 5229974, overlap 5229951 TGGGGAAGTGCGAGA GATCCAGTCC CTC GGCCCGGATC TTTTGCAATGCCAGC Daci_4754 5240069 - 5230074 - | amino acid adenylation domain-containing protein TERM 4155 5230453 - 5230474 + gr 72 -11.5 -3.38812 | overlap 5230452 TGCGCCGCAGGCAGC GCGGCACGG TCCA CCTTGCCGC TGTTGTTCAGCGGCA TERM 4156 5232597 - 5232542 - GR 76 -12.6 -3.35046 | gap 2, overlap 5232540 GCACGGTGCCAAAGA CCGGCTCCT-GCCT-GCCGCTGGTGC GGGCCA GCACCAGCGCCCAGGCCAGGTGGCAG AGCGCGGCGGGGCTG TERM 4157 5233830 - 5233870 + gr 80 -12 -3.72695 | gap 2, overlap 5233830 5233833 5233841 GGCCGAGGGCACCAT G-TAG-TCGGGCAGCGCCTG GCC CAGGCGCTGCTTGAGCTGGC TTTCCTCCACCGCGT TERM 4158 5233833 - 5233866 + gr 78 -16.1 -2.67803 | gap 1, overlap 5233830 5233830 5233841 CGAGGGCACCATGTA G-TCGGGCAGCGCCTG GCC CAGGCGCTGCTTGAGC TGGCTTTCCTCCACC TERM 4159 5233841 - 5233857 + gr 73 -13.7 -2.7386 | overlap 5233833 5233830 5233830 CCATGTAGTCGGGCA GCGCCTG GCC CAGGCGC TGCTTGAGCTGGCTT TERM 4160 5234137 - 5234127 - GR 70 -8.2 -3.86897 | overlap 5234128 GGGATTGGCGATAAA GCGC TCG GCGC TCAGGCCAGCGCGAT TERM 4161 5234457 - 5234441 - GR 75 -13.7 -2.84325 | overlap 5234438 5234436 CGCCGCCAAAGATCA CCTGGCG TAG CGCCAGG CCAGCGCCGTTCCCA TERM 4162 5235778 - 5235768 - GR 76 -2.4 -4.72272 | GGTGTTCACGAAAAA GCCC ACC GTGC CCTGCGTTTCCACCC TERM 4163 5237501 - 5237518 + gr 79 -12.7 -3.53012 | GGCTATTGGCCAGCG GCCTGCC CACG GGCAGGC TTTCGCCGCCGCGCA TERM 4164 5238509 - 5238541 + gr 73 -14.1 -2.71364 | ACACGCGGCCTGGCA GCGACAGCTCGCCCA GCC TGGGCTGCCTGTCGC TGATTGCGCCGCTGA Daci_4755 5244714 - 5240032 - | Beta-ketoacyl synthase TERM 4165 5240934 - 5240911 - GR 86 -13.8 -3.54543 | ATGCAGCGCGCCAAA GCGCTGGTGC GCCT GCGCCAGCGC CGCCTGCATCTGCGC TERM 4166 5241292 - 5241321 + gr 85 -16.3 -3.14344 | overlap 5241299 GGCGATGGCCGTGTC GGCCGCGCGCAGC CCAT GCGGCGCGCGGGC TTCGTCCAGCAGCTG TERM 4167 5243473 - 5243495 + gr 80 -14.8 -3.05844 | GCGCGGCGTGCCCGC CCGGGGCCAG GGC CTGGCCGCGG TGTTGACATGGAAGG Daci_4756 5250083 - 5244714 - | amino acid adenylation domain-containing protein TERM 4168 5245290 - 5245263 - G 75 -10.5 -4.0641 | gap 1, overlap 5245264 CTGCACCGAGACAAA GGCGGCCAGCCG CGCGC CGTC-GGCCGCC TGGCGGGCGACCACC TERM 4169 5245507 - 5245497 - G 70 -8.2 -3.85698 | overlap 5245498 GGGGTCGGCGACAAA GCGC TCG GCGC TCAGGCCCGGCCGCC TERM 4170 5247131 - 5247108 - G 100 -11 -4.72272 | gap 1, opp_overlap 5247121 GGTGTTGACGAAAAA GCCGACCACGC CCT GCA-GGTCGGC ATGCGCGCGGTTGGC TERM 4171 5248521 - 5248535 + g 71 -2.8 -4.65895 | GGCATCGACCAGGGC CTGG GCCGGCA CCAG TTTTTGCATGCCGAA Daci_4757 5251093 - 5250104 - | taurine catabolism dioxygenase TauD/TfdA Daci_4758 5251779 - 5251090 - | 4'-phosphopantetheinyl transferase Daci_4759 5252500 - 5251757 - | thioesterase Daci_4760 5252871 - 5252506 - | MbtH domain-containing protein TERM 4172 5252822 - 5252861 + g 87 -20.2 -3.04263 | gap 1, opp_overlap 5252817, overlap 5252824 CGGTTGAACATCGGT GAGGC-CAGTACGGGATCG CGG CGATCCGGTACTGCGCCTC TGTTGAACATGACGT TERM 4173 5252824 - 5252859 + g 82 -17 -3.07895 | gap 1, opp_overlap 5252817, overlap 5252822 GTTGAACATCGGTGA GGC-CAGTACGGGATCG CGG CGATCCGGTACTGCGCC TCTGTTGAACATGAC Daci_4761 5253466 - 5252942 - | ECF subfamily RNA polymerase sigma-24 factor TERM 4174 5253174 - 5253157 - G 78 -6.9 -4.65916 | opp_overlap 5253162, overlap 5253159 GGGACTCGAACAAAA GGCGCTC GGGC GAGCGGC TGTCCGGTATCTCCA TERM 4175 5254123 - 5254138 + r 78 -10.4 -3.92996 | opp_overlap 5254123 TGCAGACGAAAAAAA GCCACC TTGC GGTGGC TTCTTGTCTGTGCAG TERM 4176 5254138 - 5254123 - R 100 -10.4 -5.58454 | opp_overlap 5254123 TGCAGACGAAAAAAA GCCACC TTGC GGTGGC TTCTTGTCTGTGCAG Daci_4762 5254949 - 5254614 - | nitrogen regulatory protein P-II Daci_4763 5258055 - 5254966 - | CzcA family heavy metal efflux protein Daci_4764 5259277 - 5258060 - | RND family efflux transporter MFP subunit Daci_4765 5260776 - 5259319 - | outer membrane efflux protein Daci_4766 5261398 - 5260994 - | hypothetical protein TERM 4177 5261613 - 5261598 - R 100 -10.4 -5.72622 | opp_overlap 5261598 GGCAGAAACAAAAAA GCCACC TTGC GGTGGC TTCTTGTCTGTGCAG TERM 4178 5261598 - 5261613 + r 78 -10.4 -3.92996 | opp_overlap 5261598 GGCAGAAACAAAAAA GCCACC TTGC GGTGGC TTCTTGTCTGTGCAG TERM 4179 5262221 - 5262198 - R 100 -10.3 -5.24129 | opp_overlap 5262198, overlap 5262217 TCCGCCGATAAAAAA GCGCCTTCG TTTTTT CAAAGGCGC TTACATACCAAGCGG Daci_4767 5264031 - 5262625 - | glutamyl-tRNA synthetase TERM 4180 5263657 - 5263672 + g 78 -6.8 -4.56133 | gap 1 TTCAGGGCGCCAGGT GCCGTCG TAG CG-CGGC TTTTCCTTGTTGGCC Daci_4768 5265386 - 5264028 - | O-succinylhomoserine sulfhydrylase TERM 4181 5265411 - 5265391 - R 100 -19.7 -5.02074 | opp_overlap 5265389 5265388 5265386 TCATTTGTCAAAAAA GGGCGGGCC TCA GGCCCGCCC CCGTATTGTCACTGA Daci_4769 5266970 - 5265462 - | amidophosphoribosyltransferase Daci_4770 5267595 - 5267104 - | colicin V production protein Daci_4771 5268592 - 5267645 - | sporulation domain-containing protein TERM 4182 5268537 - 5268556 + g 91 -9.3 -5.00616 | GGCCGCCTCGATGCG GACGACG AATCAC CGTCGTC TTTTTTGCCGGGCCA TERM 4183 5268641 - 5268625 - R 73 -13.7 -2.78935 | opp_overlap 5268610 ATATCGGCCACCACA GCGGCCA CGA TGGCCGC CTGCGGTGCGGATCA Daci_4772 5269985 - 5268663 - | FolC bifunctional protein Daci_4773 5270083 - 5270442 + | arsenate reductase and related Daci_4774 5270672 - 5271313 + | 17 kDa surface antigen TERM 4184 5271338 - 5271352 + F 81 -8.5 -4.65895 | GCGCTCGCCCTGCAA GCCCC GACAA GGGGC TTTTTGCATGGCGGC Daci_4775 5271441 - 5271758 + | hypothetical protein Daci_4776 5271877 - 5273211 + | argininosuccinate synthase TERM 4185 5273397 - 5273382 - T 72 -11.8 -3.32963 | opp_overlap 5273382 ACTTGCATCCCACAA GCCGCC GCAA GGCGGC TTTTTTACGCCCTTG TERM 4186 5273382 - 5273397 + T 100 -11.8 -5.03145 | opp_overlap 5273382 ACTTGCATCCCACAA GCCGCC GCAA GGCGGC TTTTTTACGCCCTTG Daci_4777 5274312 - 5273413 - | LysR family transcriptional regulator TERM 4187 5273498 - 5273450 - G 79 -7.5 -4.46212 | gap 3, overlap 5273451 5273454 CGCTGCACGAGAAAA TCCAGCAGCGCGCGCACGGCCACC GGCA GGTGGC-G-GCGCGAGCTG-TACA GCGCATGCACGGTCA Daci_4778 5274451 - 5275320 + | beta-lactamase domain-containing protein Daci_4779 5275419 - 5275784 + | SPW repeat-containing protein TERM 4188 5275806 - 5275842 + T 100 -21.6 -4.63486 | opp_overlap 5275808, overlap 5275808 GATACAAAGCAAGCA AAGCGGCCCGCAGGCC TCCAT GGTCTGCGGGCCGCTG TTTTCTTGAGGCCGT TERM 4189 5275840 - 5275808 - T 100 -22 -4.06001 | opp_overlap 5275806 5275808 TACAAAGCAAGCAAA GCGGCCCGCAGGCC TCCAT GGTCTGCGGGCCGC TGTTTTCTTGAGGCC TERM 4190 5275808 - 5275840 + T 100 -24.2 -3.93367 | opp_overlap 5275808, overlap 5275806 TACAAAGCAAGCAAA GCGGCCCGCAGGCC TCCAT GGTCTGCGGGCCGC TGTTTTCTTGAGGCC Daci_4780 5276965 - 5275865 - | UDP-N-acetylenolpyruvoylglucosamine reductase Daci_4781 5277070 - 5277555 + | nucleotide-binding protein Daci_4782 5277590 - 5278255 + | hypothetical protein TERM 4191 5279066 - 5279027 - g 70 -12 -3.28712 | gap 1 TGTGCGGCTGGACAA CGGCGACATCGCCGTGGTG CTG CGCCGTGGCGA-GCCGCCG CAGCCGCCGCTGGTG Daci_4783 5278296 - 5279285 + | putative metal dependent phosphohydrolase Daci_4784 5281073 - 5279331 - | twin-arginine translocation pathway signal Daci_4785 5282653 - 5281070 - | spermidine synthase TERM 4192 5281241 - 5281208 - G 77 -10.9 -3.85698 | gap 1 CTGCGCGCTCAGAAA GCGCAGGCCCGCAGGC AGG GCAT-CGGGCTCGCGC CAAGGCCGGTGGCTG Daci_4786 5284840 - 5282702 - | TonB-dependent siderophore receptor Daci_4787 5285249 - 5285031 - | hypothetical protein Daci_4788 5286800 - 5285268 - | putative transmembrane protein Daci_4789 5287579 - 5286899 - | hypothetical protein TERM 4193 5286932 - 5286956 + g 74 -11.3 -3.71848 | overlap 5286944 GCCAGTGCCGGGCTT GGCTGGCGCAG TGG CGGCGTCGGCC TTCTTGCTGCCCAGC TERM 4194 5287672 - 5287729 + r 82 -12.8 -3.68738 | gap 3, overlap 5287674 5287675 ACACATGTTTTTCAT CAGGACCTGCGCGAACCCGTGGGAGGCGG TGG CCGCCTTCC-CGTG-T-GCGCAAGTCATG TTCATTTCTTCAGGG Daci_4790 5288242 - 5287748 - | ybaK/ebsC protein TERM 4195 5287862 - 5287826 - G 79 -11.5 -3.96624 | gap 1, opp_overlap 5287830 5287843 CAGCTGCACCAGAAA GCCGCGGCGC-CCGCC GTTGAT GGCGATGCGCGGCAGC GCCAGGATGCTCTCT TERM 4196 5288250 - 5288266 + H 85 -2.3 -5.31456 | TTGGACATGAATTTT TTATCGT TTT ACAATAA TTTTTTATCGATTCA Daci_4791 5288300 - 5288848 + | hypothetical protein Daci_4792 5288851 - 5289066 + | XRE family transcriptional regulator Daci_4793 5289042 - 5289686 + | hypothetical protein Daci_4794 5290780 - 5289704 - | aldo/keto reductase TERM 4197 5289885 - 5289863 - G 72 -6.1 -4.25104 | overlap 5289864 CTTGGTGTAGCAAAA CGCCAGCGC CAGCT GCGTGGGCG TGAGGCCATGCTCGC TERM 4198 5290855 - 5290822 - R 100 -28.9 -2.79183 | opp_overlap 5290853 TTTACCCTGACGACA GCGCGCCCACCCGGC CAGG GCCGGGCGGGCGCGC TGCGTCCGTCGGGAT Daci_4795 5291964 - 5290870 - | 4-hydroxyphenylpyruvate dioxygenase Daci_4796 5293410 - 5291986 - | amino acid permease-associated region TERM 4199 5293270 - 5293237 - G 82 -5.9 -4.77438 | gap 1, overlap 5293239 5293242 ACGCATGATGAAAAA GATGATCAGCC-CGCC AGT GGCGTAGCCGAGCAGC ACGGACGGCCCGGCC TERM 4200 5293579 - 5293560 - H 85 -2.2 -5.38249 | opp_overlap 5293560 ATCAACTATAAAAAA CAATAAAT TATT ATTTCTTG TAATTTATCCCTATG Daci_4797 5293731 - 5294381 + | TetR family transcriptional regulator Daci_4798 5295265 - 5294351 - | LysR family transcriptional regulator TERM 4201 5294871 - 5294834 - G 74 -13.4 -3.35679 | gap 1, overlap 5294835 GGCGCCGATGTAGAA CGCGCCCTGCAGGCCGC CGGCC GCGACCTGC-GCGCGCA ACTCCTCGGCCCAGC TERM 4202 5295289 - 5295317 + r 79 -13.1 -3.53444 | opp_overlap 5295259 AGCCTAGCGCAGGCG CCAGGGCCTGC GGCCCGG GCAGGCCCGGG TTTCAGGGAACATCC Daci_4799 5296440 - 5295349 - | ABC transporter related Daci_4800 5298186 - 5296447 - | binding-protein-dependent transport systems inner membrane component Daci_4801 5299600 - 5298272 - | extracellular solute-binding protein TERM 4203 5298515 - 5298562 + g 70 -12.1 -3.33696 | gap 3, overlap 5298512 GGCATTGGGCTTGGC CTGCA-G-GGCCTTGTGCGCC-TC CTG GATGGCGCGCGTGGCCGCCTGCAG TTCCTTGAGGCGGAA TERM 4204 5299403 - 5299421 + g 70 -8.8 -3.95324 | opp_overlap 5299403 CAACTCGCGCACATA CGCTACGG CAG CCGTGGTG TTCTTGTTCAGGATC Daci_4802 5299802 - 5300116 + | hypothetical protein Daci_4803 5300128 - 5300514 + | hypothetical protein Daci_4804 5300618 - 5301595 + | alpha/beta hydrolase fold Daci_4805 5304175 - 5301641 - | peptidase S45 penicillin amidase TERM 4205 5304288 - 5304267 - H 76 -9.4 -4.08706 | gap 1, overlap 5304268 TGCTCACGACAGAAA GCC-GCGCC TGCAG GGCGCAGGC TTCAGGCGACAATCA Daci_4806 5304361 - 5304741 + | hypothetical protein TERM 4206 5304792 - 5304780 - T 76 -5.5 -4.61633 | overlap 5304781 ACAGAGCCTCAAAAA CTGGC GCG GCCAA GAACAAGGGACAGCG Daci_4807 5305644 - 5304895 - | fatty acid hydroxylase TERM 4207 5305295 - 5305270 - G 81 -8.1 -4.58395 | opp_overlap 5305276 GGGATGGGCGAAAAA CGCCGTGAGCG CCTC CACACGCGGCG CGCTGTGGTGCAGCT Daci_4808 5306743 - 5305664 - | muramoyltetrapeptide carboxypeptidase TERM 4208 5306777 - 5306789 + r 84 -9.1 -4.57073 | overlap 5306775 5306776 AACGGGTGCGGGGGC GGCAG CGG CTGCC TTTTTGCGGGGCGTG Daci_4809 5308394 - 5306967 - | CMP/dCMP deaminase zinc-binding TERM 4209 5307456 - 5307421 - GR 75 -5.5 -4.57073 | gap 3, overlap 5307422 5307423 CAGGCGCCGCAAAAA CGTGCGGGCTCGGCC-TG CGC CACGGCC-AGCCC-CAGG CGCGCGCCATCGTCA Daci_4810 5309631 - 5308363 - | extracellular ligand-binding receptor TERM 4210 5309184 - 5309206 + gH 71 -9 -3.78934 | TGGTGCCCGACTGCA GGTGGCCGAC CAC GGCCGCCACC TTCTTGTCGCACAGG TERM 4211 5309742 - 5309687 - H 71 -8 -4.05788 | gap 1 CCCTGGCAAACGAAA TCCGCTGC-GGCGTGGCCCACTCGGGC GCT GCCCGGCCGGGCAAGGCCTGGCGCAGA AAGCGCGCGTCAGGC TERM 4212 5309779 - 5309745 - H 73 -9 -3.85698 | GGCCTGGCGCAGAAA GCGCGCGTCAGGCCCG GGG CGGGGCAGGCACGGGC CGGGGTATCCGGCAT TERM 4213 5309856 - 5309840 - H 78 -7.2 -4.72333 | opp_overlap 5309847 AAGGATAGGCAAAAA CCGGCG CCGCC CGCCAG GGCATCGGGCGCATA TERM 4214 5309847 - 5309885 + H 93 -8.6 -5.02074 | opp_overlap 5309840 GGCAAAAACCGGCGC CGCCCGCCAGGGCATCGG GCG CATACCCCCTGGCGCGCG TTTTTTCGGGGCTGC TERM 4215 5309955 - 5309973 + H 95 -4.4 -5.60993 | opp_overlap 5309965, overlap 5309956 TTTTCGTCGCCGGAC CGCCCCAA GAG TGGGGGCC TTTTTTTGTCGCCGG TERM 4216 5310027 - 5310007 - H 100 -13.9 -5.0916 | overlap 5309965 GCCCCAAGACAAAAA GCGGCCCCC TTG GGGGGCAGC GGACCTTGCGCAGCA Daci_4811 5310135 - 5312141 + | peptidase U32 Daci_4812 5312386 - 5312105 - | hypothetical protein Daci_4813 5314739 - 5312397 - | oxidoreductase alpha (molybdopterin) subunit TERM 4217 5312849 - 5312792 - G 74 -14.6 -3.06315 | gap 1, overlap 5312783 TGAACAGCGTGAACA CCG-GCGATGCGCCGGGGCTGCGCGCG GCGCG CGCGCGGTGCACGGGCGTGTCGCGCGG CACGGCGTGCACGAA Daci_4814 5314868 - 5315326 + | GCN5-related N-acetyltransferase Daci_4815 5318113 - 5315339 - | ATP-dependent transcription regulator LuxR TERM 4218 5317546 - 5317535 - G 73 -7.2 -4.18018 | overlap 5317536 CTCGCCCACGGAAAA GCGC AGCA GCGC CGCATCGATCTCCAG TERM 4219 5318269 - 5318216 - H 85 -16.7 -2.8655 | gap 1, overlap 5318246 5318258 TGGAGGCAGATCATA GGTGGCGGACCGCCGCCTGTC-CC GATCCAA GGCGACAGGCAACGGCGCGCCGCC AACGCACCAACCAAG Daci_4816 5318296 - 5319078 + | short-chain dehydrogenase/reductase SDR Daci_4817 5319212 - 5320396 + | acetyl-CoA acetyltransferase Daci_4818 5320466 - 5321290 + | ABC transporter related Daci_4819 5321274 - 5321999 + | ABC transporter related Daci_4820 5322005 - 5322877 + | inner-membrane translocator Daci_4821 5322881 - 5324083 + | inner-membrane translocator TERM 4220 5324953 - 5324934 - g 75 -9.2 -4.18018 | GGCCTTCATGCAAAA GCGCGAGC CCGT GTTCGCGC CCCGCCAGCCGGGCT Daci_4822 5324113 - 5324970 + | enoyl-CoA hydratase/isomerase TERM 4221 5325097 - 5325081 - g 100 -11.5 -4.81212 | GCCACCACAAGAAAA GCGGGCA CGG CGCCCGC AAGCCAGGAGACCAC Daci_4823 5325009 - 5326322 + | extracellular ligand-binding receptor Daci_4824 5326357 - 5328012 + | AMP-dependent synthetase and ligase Daci_4825 5328025 - 5329107 + | L-carnitine dehydratase/bile acid-inducible protein F Daci_4826 5329117 - 5330679 + | AMP-dependent synthetase and ligase TERM 4222 5330812 - 5330790 - g 73 -9.8 -3.84451 | TTCTGGAAACCGAAA TGCAGCCCCA GGA CGAGGCCGCA CGCCAGCGCGGCAAC Daci_4827 5330705 - 5331853 + | acyl-CoA dehydrogenase domain-containing protein TERM 4223 5332022 - 5332048 + G 90 -14.4 -3.99324 | overlap 5332021 ACTGGCGGCGGCACC GGCCTGGGCCGT GTC ATGGCCGAGGCC TTTCTCATGATGGGC Daci_4828 5331947 - 5332837 + | short-chain dehydrogenase/reductase SDR Daci_4829 5332855 - 5333667 + | enoyl-CoA hydratase/isomerase TERM 4224 5333714 - 5333681 - f 74 -10.9 -3.5525 | gap 1, overlap 5333683 5333684 AGACACCTTTTGAAA CAGCCACCGGACCCTG CAT CGGGGTCCGGCG-CAG CCATCCGCAAATACC TERM 4225 5333712 - 5333683 - f 76 -12.1 -3.35224 | gap 1, overlap 5333681 5333684 ACACCTTTTGAAACA GCCACCGGACCCTG CAT CGGGGTCCGGCG-C AGCCATCCGCAAATA Daci_4830 5333928 - 5334812 + | 3'-5' exonuclease Daci_4831 5335987 - 5334809 - | diguanylate cyclase TERM 4226 5337304 - 5337292 - g 75 -4.7 -4.56597 | opp_overlap 5337298, overlap 5337296 CGCCCTGGTGAAAAA GCAGC TGG GCGGC CGCGCCTCGGGCATC Daci_4832 5336243 - 5337592 + | O-acetylhomoserine/O-acetylserine sulfhydrylase Daci_4833 5338708 - 5337656 - | hypothetical protein Daci_4834 5340087 - 5338795 - | hypothetical protein Daci_4835 5341318 - 5340080 - | hypothetical protein TERM 4227 5340249 - 5340231 - G 73 -10.2 -3.85698 | overlap 5340232 TCGCCGGCCGAGAAA TGCCGCAG CCC CTGCGGCC AGCCCACGATCAGCG TERM 4228 5341455 - 5341428 - R 100 -20 -5.52384 | TTCGGACGAAAAAAA TCCGGTATGCCG CGAA CGGCATACCGGA CCAAGTACCCATCCT Daci_4836 5342141 - 5341527 - | OmpW family protein TERM 4229 5341888 - 5341902 + g 73 -7.1 -4.11692 | TGGCCCAGGCCGTTG GCACG CAGGT CGTGC TTTTGCGGGTAGGTC Daci_4837 5342666 - 5343286 + | glutathione S-transferase domain-containing protein Daci_4838 5343658 - 5343323 - | addiction module antitoxin Daci_4839 5343954 - 5343658 - | addiction module antitoxin Daci_4840 5344217 - 5344471 + | hypothetical protein Daci_4841 5345315 - 5344509 - | TPR repeat-containing protein Daci_4842 5346190 - 5345348 - | hypothetical protein TERM 4230 5345841 - 5345872 + g 70 -8.6 -3.86897 | overlap 5345842 5345845 AGCTCGCAGATGCGG TTGAGCGCCGTGCG CGCG CGCTCGGTGCTGAG TTTCTCGGCCCTGCC TERM 4231 5346215 - 5346196 - R 93 -16.4 -3.67989 | opp_overlap 5346190 5346200 AAAATTCCATGCAAA CGGGGGCC GTCC GGCCCCCG TGGCGTGCCTTGCCG Daci_4843 5347241 - 5346264 - | hypothetical protein TERM 4232 5347261 - 5347271 + r 71 -5.4 -4.40561 | TTACTCCAGTGAATT GTTC GGG GAAC TTCTTTTTGCCCGGG TERM 4233 5347279 - 5347307 + r 84 -16.7 -2.79501 | CGGGGAACTTCTTTT TGCCCGGGCGCCA TCA TGGGGCCTGGGCA TGTCCTGCCCATGTA Daci_4844 5348602 - 5347370 - | VWA containing CoxE family protein Daci_4845 5351163 - 5348599 - | hypothetical protein TERM 4234 5349749 - 5349770 + g 86 -2.9 -5.19212 | gap 1 AGGACCTTGGCGGCC GCCTCGGGCT TAA GGCGC-AGGC TTTTTTGCTGCTGCT Daci_4846 5352297 - 5351215 - | ATPase Daci_4847 5354131 - 5352368 - | hypothetical protein TERM 4235 5352409 - 5352395 - G 77 -11.4 -3.87815 | GCGCAGGGCGACAAA GGCCTG GTG CAGGCC CAGGCGCAGATCGAC TERM 4236 5353356 - 5353372 + g 78 -6.5 -4.56597 | TCGCGGATCTCCTTG CTGCGGT CGG ACAGCAG TTTTTCGAGCAGCGG Daci_4848 5355573 - 5354128 - | zinc finger SWIM domain-containing protein TERM 4237 5356694 - 5356730 + G 90 -17.1 -3.53012 | CCAGGCGCAGTCCCT GCCCGGCGCGCCCGCGC AGC GCGCCGCCGTGCCGCGC TTTGCGCCGGGCGGG Daci_4849 5356050 - 5357369 + | radical SAM domain-containing protein TERM 4238 5358020 - 5357974 - g 77 -17.3 -2.52896 | gap 2 TCACGCCGCAATGCA GCGCGCACTGGGACGGCCATGCG CTG CGCCTGAC-G-CCCGGTGCGCGC CGCAGCGATGCCCCG Daci_4850 5357385 - 5358224 + | uracil-DNA glycosylase superfamily protein TERM 4239 5358278 - 5358254 - T 100 -9.4 -5.61913 | gap 1, opp_overlap 5358259, overlap 5358259 AAGAAACAGAAAAAA GA-AAAGGCCC CGAA GGGCCTTTGTC TGCTTTGCAGCGTCG TERM 4240 5358259 - 5358272 + T 79 -9.5 -4.17516 | opp_overlap 5358254 5358259 ACAGAAAAAAGAAAA GGCCC CGAA GGGCC TTTGTCTGCTTTGCA TERM 4241 5358272 - 5358259 - T 100 -9.5 -5.51612 | opp_overlap 5358259, overlap 5358254 ACAGAAAAAAGAAAA GGCCC CGAA GGGCC TTTGTCTGCTTTGCA Daci_4851 5362331 - 5358303 - | phosphoribosylformylglycinamidine synthase TERM 4242 5358608 - 5358582 - G 74 -12.2 -3.57561 | overlap 5358583 GCGGAAGTTGGCAAA GCCTTCGCCGTG GGC CACGGCGATGGG CAGGCGGCTGCCGGC TERM 4243 5358607 - 5358583 - G 70 -15.7 -2.74322 | overlap 5358582 CGGAAGTTGGCAAAG CCTTCGCCGTG GGC CACGGCGATGG GCAGGCGGCTGCCGG TERM 4244 5359601 - 5359632 + g 76 -13.6 -3.44051 | overlap 5359602 CGGCGAAGGCCATCT CGGCCACGGTGGCC AGCA GGCCGCCGTCGCCC TTGTCGTGGTAGGCC TERM 4245 5359602 - 5359631 + g 77 -17.1 -2.66216 | overlap 5359601 GGCGAAGGCCATCTC GGCCACGGTGGCC AGCA GGCCGCCGTCGCC CTTGTCGTGGTAGGC TERM 4246 5362413 - 5362372 - H 100 -15.8 -4.08216 | gap 1, opp_overlap 5362379 GGAGGCTTGTGAAAA GCGCCCTGCGGCCCCGCCC TCCGG GGGCTGG-CTGCAAGGCGC TGAATCGGTGAGGCC Daci_4852 5362515 - 5363330 + | methionine aminopeptidase, type I TERM 4247 5364824 - 5364844 + G 87 -8.9 -4.72272 | CAGCACATCCTCATG GTGCTGCGC AAT GTGCGGCGC TTTTTCATGGCCGAG TERM 4248 5365833 - 5365788 - g 72 -8.9 -4.07568 | gap 1, overlap 5365832 CGCGCCGCGTCAAAA GCTTCCCCTTTGCGCCGC-GCG TCA CGCTGCAGCCCGACGAGAAAGC CCAGCACTGGCTGCT Daci_4853 5363366 - 5366053 + | PII uridylyl-transferase TERM 4249 5366070 - 5366096 + T 100 -20.9 -4.18018 | opp_overlap 5366070 TTTGTGGCGAAAAAA GGCCCGCCCTG TCAAC CAGGGCGGGCC TTTTGCATCCAGGCG TERM 4250 5366096 - 5366070 - T 100 -20.9 -5.00616 | opp_overlap 5366070 TTTGTGGCGAAAAAA GGCCCGCCCTG TCAAC CAGGGCGGGCC TTTTGCATCCAGGCG Daci_4854 5367629 - 5366136 - | xanthine permease Daci_4855 5368458 - 5367919 - | peptide deformylase Daci_4856 5368559 - 5369116 + | hypothetical protein TERM 4251 5369142 - 5369120 - T 72 -12 -3.30124 | opp_overlap 5369124, overlap 5369121 5369124 CCCGAGCCGTGAGAA TGAAGGCCTG CAG CAGGCCTTCC TGAAAAAATTCCCCC TERM 4252 5369141 - 5369121 - T 78 -15.5 -2.57931 | opp_overlap 5369124, overlap 5369120 5369124 CCGAGCCGTGAGAAT GAAGGCCTG CAG CAGGCCTTC CTGAAAAAATTCCCC TERM 4253 5369138 - 5369124 - T 74 -11.4 -3.44325 | opp_overlap 5369124, overlap 5369121 5369120 AGCCGTGAGAATGAA GGCCTG CAG CAGGCC TTCCTGAAAAAATTC TERM 4254 5369561 - 5369538 - T 100 -18.2 -4.3586 | opp_overlap 5369538 GGAGCCAGATGAAAA GCCCGCATGC CAAC GCATGCGGGC TTTTTTGTTGGGTCA TERM 4255 5369538 - 5369561 + T 100 -18.2 -5.4833 | opp_overlap 5369538 GGAGCCAGATGAAAA GCCCGCATGC CAAC GCATGCGGGC TTTTTTGTTGGGTCA Daci_4857 5369900 - 5369574 - | hypothetical protein TERM 4256 5370219 - 5370191 - g 73 -12.4 -3.53012 | TCCCTCCTGTGGAAA CGGCATGGGGCC CCAAC GACCCCATCCCG GGCCTGCTGGCCGCA TERM 4257 5370757 - 5370786 + G 77 -15.7 -3.14344 | gap 1, opp_overlap 5370773 CAGCATCTGGCCTCG CTGGGCGCGC-GCG AAA TGCCGCGCGCCCGG TTCCTGCAAACCGTG Daci_4858 5370073 - 5370921 + | leucyl/phenylalanyl-tRNA--protein transferase TERM 4258 5371292 - 5371279 - g 71 -9.5 -3.78775 | overlap 5371280 TGCGCTACCAGCAAA GCCGC CACA GCGGC GGAGGCATGGACCAT Daci_4859 5370918 - 5371667 + | arginyl-tRNA-protein transferase Daci_4860 5371796 - 5372620 + | IclR family transcriptional regulator TERM 4259 5372715 - 5372687 - T 100 -21.9 -3.96148 | opp_overlap 5372690 5372694, overlap 5372690 5372694 TCTGCCCACCAGAAA CAACAAAGGCGCC ATC GGCGCCTTTGTTG TGAGGGGAAAGAAAA TERM 4260 5372690 - 5372712 + T 95 -17.8 -3.28712 | opp_overlap 5372687 5372690 5372694, overlap 5372694 GCCCACCAGAAACAA CAAAGGCGCC ATC GGCGCCTTTG TTGTGAGGGGAAAGA TERM 4261 5372712 - 5372690 - T 100 -17.8 -4.11183 | opp_overlap 5372690 5372694, overlap 5372687 5372694 GCCCACCAGAAACAA CAAAGGCGCC ATC GGCGCCTTTG TTGTGAGGGGAAAGA TERM 4262 5372694 - 5372708 + T 100 -12.8 -4.30719 | opp_overlap 5372690 5372687 5372694, overlap 5372690 ACCAGAAACAACAAA GGCGCC ATC GGCGCC TTTGTTGTGAGGGGA TERM 4263 5372708 - 5372694 - T 100 -12.8 -4.63952 | opp_overlap 5372694 5372690, overlap 5372690 5372687 ACCAGAAACAACAAA GGCGCC ATC GGCGCC TTTGTTGTGAGGGGA Daci_4861 5373829 - 5372732 - | peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 TERM 4264 5372878 - 5372922 + g 82 -4.2 -5.00616 | gap 1, overlap 5372879 TGCGGCCAGCCACCT GCGCCTGCATGACC-AGGCAG CGGC CTGCCTCGGAGATGTAGCCGG TTTTTTGCAGACCGA TERM 4265 5373912 - 5373885 - R 74 -3.4 -4.76892 | gap 1, opp_overlap 5373877 5373874 5373885, overlap 5373877 ACATTAATCGAAAAA GTCGCAC-TGTGA CAA TAACTTGTGCGAC TTTTCGATAATTTAA Daci_4862 5375487 - 5373949 - | 2-isopropylmalate synthase TERM 4266 5375573 - 5375548 - R 100 -12.6 -5.15634 | gap 1 CAGGCGATGAAAAAA GCCGGTGC-GC TTGTG GCTGCACCGGC TCGGGAACGAAATTC Daci_4863 5377278 - 5375587 - | 2-isopropylmalate synthase TERM 4267 5376402 - 5376374 - G 70 -8.7 -3.91144 | TCGATATCGGAGAAA TCCAGCCCGGGCG ACA CGCCCTGGATGTA CATGTTCAGCGCCAC TERM 4268 5377375 - 5377349 - R 100 -12.3 -4.39571 | gap 1, overlap 5377369 CCCACAAATGCAAAA CGGCCCGT-CGC TGGT GCAAACGGGCCG TGAAAGTAGGTATGT Daci_4864 5378338 - 5377505 - | CDP-diacylglycerol--serine O-phosphatidyltransferase TERM 4269 5378470 - 5378489 + r 86 -15 -3.41527 | opp_overlap 5378470 TCCCTGCACGAAAAA GGCCACCC GTCG GGGTGGCC TTGTCCTGCACCTTG TERM 4270 5378489 - 5378470 - R 100 -15 -4.72272 | opp_overlap 5378470 TCCCTGCACGAAAAA GGCCACCC GTCG GGGTGGCC TTGTCCTGCACCTTG Daci_4865 5379565 - 5378549 - | ketol-acid reductoisomerase Daci_4866 5380129 - 5379638 - | acetolactate synthase 3 regulatory subunit Daci_4867 5382065 - 5380284 - | acetolactate synthase 3 catalytic subunit Daci_4868 5382202 - 5382915 + | ECF subfamily RNA polymerase sigma-24 factor Daci_4869 5382912 - 5383370 + | putative transmembrane protein TERM 4271 5383428 - 5383448 + G 81 -18.3 -2.77523 | overlap 5383424 5383425 CGTTCCACCGCTCAG CCGCCGCCA TCC TGGCGGCGG TGCTGTTGATGGCGC TERM 4272 5383931 - 5383892 - g 87 -8.4 -4.77438 | gap 1 AGCGACGAGGAAAAA CGCCTGCTGGCCGCGCGCG CCG CGCCCAAGGCCAAG-GGCG CCGCCACCGCCATAG Daci_4870 5383391 - 5384242 + | putative transmembrane protein Daci_4871 5384280 - 5384825 + | RDD domain-containing protein TERM 4273 5385016 - 5384998 - g 83 -5.3 -4.88407 | gap 1, opp_overlap 5385015 5385015, overlap 5384991 5385000 5385013 GGATGGAACGAAAAA GC-CTTCC GCCA GGAAGCGC TGGCAGCCATCGTGC TERM 4274 5385198 - 5385256 + G 72 -14.6 -2.88579 | gap 3 GCAGGCCAAGGACAT GGGCAGCGCGGCCGTGATGCTGGCGCTGC TGCT GT-GCGCCGGCGTC-TGGCTG-GCCGCCC TCTATCAACGGTTCA Daci_4872 5384866 - 5385279 + | diacylglycerol kinase Daci_4873 5385276 - 5385869 + | hypothetical protein TERM 4275 5385912 - 5385889 - T 93 -14.6 -3.85567 | AAGCGTAAACGGAAA CGGCCACCCT TGAG AGGATGGCCG CCAGCGTCGAGATAT TERM 4276 5385958 - 5385934 - T 74 -12.8 -3.26545 | opp_overlap 5385933, overlap 5385935 TCGAGATATCAGGAA TGCAGGGCGC CGAAT GCGCCCTGCC CTGCTCTCGGACTCA TERM 4277 5385957 - 5385935 - T 78 -16.3 -2.55606 | opp_overlap 5385933, overlap 5385934 CGAGATATCAGGAAT GCAGGGCGC CGAAT GCGCCCTGC CCTGCTCTCGGACTC Daci_4874 5386309 - 5385971 - | nitrogen regulatory protein P-II Daci_4875 5388179 - 5386500 - | NAD+ synthetase TERM 4278 5388911 - 5388928 + G 79 -2.6 -4.84359 | CACGGGCCGGACATG GGCGCA CAGGAC TGGGCC TTTTTCTACCGCTGC Daci_4876 5388236 - 5389459 + | hypothetical protein Daci_4877 5391307 - 5389463 - | methyl-accepting chemotaxis sensory transducer TERM 4279 5390860 - 5390879 + g 72 -4.9 -4.48987 | overlap 5390861 GCTTCAGCGACTCGC CGCCCAG CACCGC CTGGGCC TTTTCCTTCTCGCCC TERM 4280 5391034 - 5391050 + g 75 -8.7 -4.11692 | overlap 5391012 CGGCCAGGCGGCGCT GCAGTTG TTC CAGCTGC TTTTCCGAATCGGTC TERM 4281 5391767 - 5391741 - R 100 -20.2 -4.22524 | overlap 5391736 AGACGCAAAAGGAAA GCGGCCCCATGC AAA GCATGGAGCCGC CAGAAAGGGAAGCTG Daci_4878 5393568 - 5391799 - | methyl-accepting chemotaxis sensory transducer TERM 4282 5393647 - 5393674 + r 85 -12.6 -3.70811 | opp_overlap 5393647 CGACAAAACAAAAAA CGCACCCGGCGC GTAG GCAACGGGTGCG TTTCAAATTGTATCA TERM 4283 5393674 - 5393647 - R 100 -14.8 -5.86976 | opp_overlap 5393647 CGACAAAACAAAAAA CGCACCCGGCGC GTAG GCAACGGGTGCG TTTCAAATTGTATCA Daci_4879 5394277 - 5393750 - | inorganic diphosphatase TERM 4284 5394320 - 5394306 - R 100 -7 -5.64421 | overlap 5394307 AGTTGAAACAAAAAA GCCCCC GCA GGGGGA TAGCAGCGTGATTTT TERM 4285 5394319 - 5394307 - R 78 -10.5 -3.97026 | overlap 5394306 GTTGAAACAAAAAAG CCCCC GCA GGGGG ATAGCAGCGTGATTT Daci_4880 5394973 - 5394431 - | hypothetical protein Daci_4881 5395036 - 5395872 + | Crp/FNR family transcriptional regulator Daci_4882 5395977 - 5397410 + | aldehyde dehydrogenase TERM 4286 5397465 - 5397431 - g 100 -17.9 -4.21194 | gap 1 GCGCATGACGGAAAA TCGCGGGATGCCCGGC GCCA GCCG-GCAGCCCGCGA CAGAAAGAACAGCTT Daci_4883 5397420 - 5398094 + | hypothetical protein TERM 4287 5398738 - 5398769 + G 72 -4.2 -4.57341 | gap 1, opp_overlap 5398755 CCGCCGAGTTTGCCG GCG-GCCCGGTGGAC GAA GCACGCCGCGCACGC TTTTTGGCGACCATT Daci_4884 5398119 - 5398904 + | 3-ketoacyl-(acyl-carrier-protein) reductase Daci_4885 5398970 - 5400106 + | molybdenum cofactor biosynthesis protein A Daci_4886 5400194 - 5400889 + | molybdopterin-guanine dinucleotide biosynthesis protein A TERM 4288 5401179 - 5401145 - g 76 -14.2 -3.41602 | overlap 5401146 GCCAGCGCATGACAA CGCCGCCATGGATGGC TAT GCCTTCGATGGCGGCC AGCTGCAGGCTGCTC TERM 4289 5401178 - 5401146 - g 77 -17.7 -2.64747 | overlap 5401145 CCAGCGCATGACAAC GCCGCCATGGATGGC TAT GCCTTCGATGGCGGC CAGCTGCAGGCTGCT Daci_4887 5400942 - 5402288 + | molybdenum cofactor synthesis domain-containing protein TERM 4290 5402621 - 5402566 - g 83 -14.7 -3.58343 | gap 2, overlap 5402567 GGCAGGAGGTGCAAA GGCTGGTGCGGCCCCAGCAGGCCCGCG AGAT CGCGGACGCGCTGGC-CCGCATCA-CC GCCCAGCCCTGACAC TERM 4291 5402621 - 5402567 - g 70 -14.9 -2.74792 | gap 1, overlap 5402566 GCAGGAGGTGCAAAG GCTGGTGCGGCCCCAGCAGGCCCGCG AGAT CGCGGACGCGCTGGC-CCGCATCACC GCCCAGCCCTGACAC Daci_4888 5402301 - 5402633 + | thioredoxin domain-containing protein Daci_4889 5402671 - 5403411 + | TetR family transcriptional regulator Daci_4890 5404457 - 5403465 - | hypothetical protein Daci_4891 5405317 - 5404496 - | taurine dioxygenase TERM 4292 5404782 - 5404727 - G 73 -9.5 -3.89822 | gap 2, overlap 5404728 GAGCGAGTTCACAAA GGCCAC-GG-GCAGCCCGGTGACCGGG TGCT CCAGGACCACGGGCTGCTCCAGCGGCG GATGCTTGAGGCGGG Daci_4892 5407607 - 5405358 - | aldehyde oxidase and xanthine dehydrogenase molybdopterin binding Daci_4893 5408031 - 5407585 - | 2Fe-2S iron-sulfur cluster binding domain-containing protein Daci_4894 5409168 - 5408083 - | porin TERM 4293 5409382 - 5409360 - R 72 -11.2 -3.34895 | GGGACGTGGAAGCAA GGGACGGGCA TTG CACCCGCCCC CGCACCAGGCGCTCA Daci_4895 5409841 - 5409395 - | ribonuclease H Daci_4896 5410575 - 5409838 - | methyltransferase type 11 TERM 4294 5410424 - 5410393 - G 79 -10.8 -4.07568 | gap 1 GCTGGCCTCGGAAAA TGGCAGCGC-GGCCG GAT CGGCCAGCAGCGCCA CGGGCACCTCCAGCG Daci_4897 5410667 - 5411440 + | hydroxyacylglutathione hydrolase Daci_4898 5411440 - 5412975 + | lytic transglycosylase catalytic TERM 4295 5412981 - 5412969 - T 76 -6.2 -4.67234 | ATCCAAGGTGAAAAA GCGC TGAAG GCGC TGAAGGCACCGCCAC TERM 4296 5413011 - 5413030 + T 100 -15 -4.18018 | opp_overlap 5413011 CTGCCCCACTCCAAA GAGCCCGC TTTC GCGGGCTC TTTTGCGTGCGGCCC TERM 4297 5413030 - 5413011 - T 90 -15 -3.59979 | opp_overlap 5413011 CTGCCCCACTCCAAA GAGCCCGC TTTC GCGGGCTC TTTTGCGTGCGGCCC Daci_4899 5414137 - 5413052 - | twin-arginine translocation pathway signal TERM 4298 5413409 - 5413379 - G 71 -2.3 -4.56597 | overlap 5413381 GTTCTTGCGCAAAAA GGCCTGGGTCGCG TACAG CGTGCCCGAGGGC ATGGAGCCGCCGTAC Daci_4900 5414664 - 5414233 - | membrane protein-like protein TERM 4299 5414370 - 5414356 - G 70 -4.2 -4.46073 | overlap 5414357 5414358 GCGCAACACAACAAA GGCC ACGGCCA GGCC ATCGACACGCGCGGA Daci_4901 5415300 - 5414710 - | recombination protein RecR TERM 4300 5415361 - 5415340 - R 100 -14.5 -5.60993 | GTTCTCAGAAAAAAA GCGATCTGC AGGG GCAGATCGC TCGATGGCCACTCCA Daci_4902 5415778 - 5415446 - | hypothetical protein TERM 4301 5415828 - 5415807 - R 73 -5.1 -4.62069 | overlap 5415808 5415812 TCTGTAGGGTAAAAA CGAAACGCT CTGG AGCGTGTCA GGGCTGAATGGATAC TERM 4302 5415823 - 5415812 - R 71 -5.8 -4.32649 | overlap 5415808 5415807 AGGGTAAAAACGAAA CGCT CTGG AGCG TGTCAGGGCTGAATG Daci_4903 5418021 - 5415826 - | DNA polymerase III, subunits gamma and tau Daci_4904 5419660 - 5418284 - | hypothetical protein Daci_4905 5419932 - 5420264 + | thioredoxin Daci_4906 5420531 - 5421793 + | transcription termination factor Rho TERM 4303 5421825 - 5421844 + T 95 -12.8 -4.27316 | opp_overlap 5421825 CACGGCCCCCACAGA CGCCTCGC TCAC GCGGGGCG TTTTGCATTCCAGCC Daci_4907 5423276 - 5421867 - | L-carnitine dehydratase/bile acid-inducible protein F TERM 4304 5422102 - 5422070 - G 73 -16.2 -2.52623 | overlap 5422069 5422067 5422089 GCCCCGCCAGAAGAT GCGCCGTGCGCGCC AACGA GGCGCGCACCGTGC TGCCGCCTTGCCCCT Daci_4908 5423378 - 5424571 + | citrate synthase Daci_4909 5424686 - 5424931 + | ribosomal protein L31 TERM 4305 5424948 - 5424983 + F 100 -19.8 -4.59773 | opp_overlap 5424953, overlap 5424953 TCCTGCTTCTCCGGC CAGAAGGGCAGCACGG GCAA CCGCGCTGCCCTTTTG TTTTTCGCAGTCCGG TERM 4306 5424953 - 5424978 + F 100 -16.1 -5.26119 | opp_overlap 5424953, overlap 5424948 CTTCTCCGGCCAGAA GGGCAGCACGG GCAA CCGCGCTGCCC TTTTGTTTTTCGCAG TERM 4307 5424978 - 5424953 - f 95 -18.3 -3.28712 | opp_overlap 5424948 5424953 CTTCTCCGGCCAGAA GGGCAGCACGG GCAA CCGCGCTGCCC TTTTGTTTTTCGCAG TERM 4308 5425740 - 5425764 + G 83 -5.5 -4.82901 | overlap 5425724 5425742 CGTGGCCACGCTGTT CGGCCTGGGCG GTG CGACCATGGCG TTTTTCTCGCGCACC Daci_4910 5425087 - 5426826 + | putative inner membrane transmembrane protein Daci_4911 5426823 - 5428190 + | MATE efflux family protein Daci_4912 5429615 - 5428221 - | PAS/PAC sensor signal transduction histidine kinase TERM 4309 5429767 - 5429729 - R 100 -14.5 -5.03314 | gap 1 TTCATGCGGAAAAAA CGGCCTCAGGC-CAGCGC CTGC GCGCTGAGCCGGTAGCCG GCGCCGCGTACCGTC Daci_4913 5430429 - 5429734 - | two component transcriptional regulator Daci_4914 5431151 - 5430450 - | phosphate uptake regulator, PhoU Daci_4915 5431947 - 5431165 - | phosphate ABC transporter, ATPase subunit Daci_4916 5432870 - 5431986 - | phosphate transporter permease subunit Daci_4917 5433805 - 5432867 - | phosphate ABC transporter, inner membrane subunit PstC TERM 4310 5433825 - 5433779 - G 77 -11.4 -3.93256 | overlap 5433780 5433783 GAGAGCGCCAAACAA GCGATCCGCCACGCGCCCCGAC AGC ATCGGGGGGCGTAGCGGAGAAG GTGTGCGTCGCTGGG TERM 4311 5433824 - 5433780 - G 72 -14.9 -2.95472 | overlap 5433779 5433783 AGAGCGCCAAACAAG CGATCCGCCACGCGCCCCGAC AGC ATCGGGGGGCGTAGCGGAGAA GGTGTGCGTCGCTGG TERM 4312 5433821 - 5433783 - G 87 -23.2 -2.71101 | overlap 5433780 5433779 GCGCCAAACAAGCGA TCCGCCACGCGCCCCGAC AGC ATCGGGGGGCGTAGCGGA GAAGGTGTGCGTCGC TERM 4313 5433928 - 5433966 + r 100 -13.8 -4.17491 | opp_overlap 5433926, overlap 5433964 TGTGGGGAGATCAGG GGGGCCATGATGCACC TGCCGGC GGTGCGCCACGGCCCC TTTTCAGGGTTTACT Daci_4918 5435017 - 5433977 - | phosphate ABC transporter, periplasmic phosphate-binding protein TERM 4314 5435226 - 5435197 - H 86 -13.5 -3.54475 | GCTGGCACCAGACAA GCGCAGCCCTGCC ACCC GGCACCGCTGCGC ACTCCTGCTCGACGA TERM 4315 5436126 - 5436151 + G 83 -12.5 -4.08216 | gap 1, opp_overlap 5436119 5436118 CAATGAACTGGAAGT CGCCCAGGGCGC GCT GCGCCA-GGGCG TTTTGCACGACCTGC Daci_4919 5435263 - 5436747 + | Ppx/GppA phosphatase Daci_4920 5439268 - 5436818 - | polyphosphate kinase Daci_4921 5439481 - 5440461 + | Ppx/GppA phosphatase Daci_4922 5440581 - 5442434 + | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) TERM 4316 5442515 - 5442495 - T 100 -14 -5.58454 | opp_overlap 5442494 TCCAGACGAAAAAAA GCCGAGGC ATGAA GCCTCGGC CTTCCATGCACAGGA Daci_4923 5443886 - 5442543 - | phosphoglucosamine mutase Daci_4924 5444739 - 5443903 - | dihydropteroate synthase TERM 4317 5444851 - 5444825 - R 86 -13.1 -3.90588 | gap 1, opp_overlap 5444831, overlap 5444831 CATCCTGCAAGCAAA GCAAAAGGGCCC CTCG GGGCCC-TTTGC ATGGGATTGGCAGAT TERM 4318 5444831 - 5444846 + r 77 -11.8 -3.66874 | opp_overlap 5444825 5444831 GCAAGCAAAGCAAAA GGGCCC CTCG GGGCCC TTTGCATGGGATTGG TERM 4319 5444846 - 5444831 - R 95 -11.8 -4.62054 | opp_overlap 5444831, overlap 5444825 GCAAGCAAAGCAAAA GGGCCC CTCG GGGCCC TTTGCATGGGATTGG Daci_4925 5446804 - 5444882 - | ATP-dependent metalloprotease FtsH Daci_4926 5447628 - 5446975 - | ribosomal RNA methyltransferase RrmJ/FtsJ TERM 4320 5447454 - 5447425 - G 72 -15.1 -2.87564 | gap 1 GCAGCGGCGCACATA CT-GGCTCCACGCC CCG GGCGTAGAGCCCAG GTCCACCACCGTGGC TERM 4321 5447986 - 5447948 - g 100 -11.8 -5.1417 | gap 1, overlap 5447950 CCAGAAAAGGAAAAA GCCATCGACGAGAACCG CATGCC CGGTCCTCG-CGATGTC AAGCTGCTCAAGTTC Daci_4927 5447660 - 5448133 + | hypothetical protein TERM 4322 5448440 - 5448476 + G 78 -9.5 -4.1822 | gap 2 CAAGCTGGCCACCTT CAGCGCCG-ACC-TGCA TGGCC TGCACGGCACGGCGCTG TTTCTTGACGTGGAC Daci_4928 5448147 - 5448941 + | hypothetical protein TERM 4323 5448958 - 5448985 + T 73 -14.2 -2.77043 | opp_overlap 5448963, overlap 5448963 CAGCTCGACCCACAA AAAAACGCCCGC GCTT GCGGGCGTTTTC GTTTGGGATGGTGCC TERM 4324 5448963 - 5448980 + T 100 -14.1 -4.55798 | opp_overlap 5448963, overlap 5448958 CGACCCACAAAAAAA CGCCCGC GCTT GCGGGCG TTTTCGTTTGGGATG TERM 4325 5448980 - 5448963 - T 100 -14.1 -5.64274 | opp_overlap 5448963 5448958 CGACCCACAAAAAAA CGCCCGC GCTT GCGGGCG TTTTCGTTTGGGATG Daci_4929 5449462 - 5449019 - | hypothetical protein Daci_4930 5449983 - 5449507 - | transcription elongation factor GreA TERM 4326 5450010 - 5450024 + r 100 -12.8 -4.49556 | opp_overlap 5450008 CATGTTCAGCGAACG CCGCGC GCT GCGCGG TTTCTTTGGTACAGG TERM 4327 5450083 - 5450106 + r 93 -15.2 -3.75437 | opp_overlap 5450083 CACCCCAAAAGCAAA CCGCCGCACG TTGC CGCGCGGCGG TTTCATCGAATGATT TERM 4328 5450106 - 5450083 - R 100 -17.4 -4.20806 | opp_overlap 5450083 CACCCCAAAAGCAAA CCGCCGCACG TTGC CGCGCGGCGG TTTCATCGAATGATT Daci_4931 5453396 - 5450238 - | carbamoyl-phosphate synthase, large subunit TERM 4329 5451924 - 5451948 + g 79 -7.7 -4.4773 | opp_overlap 5451908, overlap 5451925 GGGACGCACGCCCAG TGCCTTGCGTG CCT CGCGCACGGCC TTTTCATTGCTGTGC TERM 4330 5452205 - 5452251 + g 70 -3.7 -4.45544 | opp_overlap 5452191, overlap 5452207 5452222 ACCAGATGCGGTCCG GACCT-GGCTCGCCGAGTTCCTT TTC GAGGATTTCG-CGGTCCTGGGTC TTTTCGTTCATGCCG Daci_4932 5454645 - 5453479 - | carbamoyl-phosphate synthase, small subunit Daci_4933 5455617 - 5454826 - | tRNA/rRNA methyltransferase (SpoU) TERM 4331 5455717 - 5455668 - R 76 -7.1 -4.55295 | gap 1, overlap 5455699 GGGCGCAGAAAGAAA CGGCA-AAGGCGCTCAGGCC GACAGCAGCAA GGCTTGCGCGCCCTGCGCCG CAGCTGCCACGCGGG Daci_4934 5456387 - 5455680 - | ribonuclease H Daci_4935 5457540 - 5456350 - | lipid-A-disaccharide synthase TERM 4332 5456450 - 5456423 - GR 72 -14.2 -2.52464 | TCGCGCCGCAATTCA TGGTGCAGCGCT GTGA AGCGCTGTACCA GCGCCTCGACGGTTG TERM 4333 5457273 - 5457243 - GR 79 -3.1 -4.84359 | gap 1, opp_overlap 5457232 5457242, overlap 5457244 5457245 CGATGCCGACAAAAA CGGCTGGCGGCTGC TTGA GCAGGCGCTGGC-G CAACTGCCGGCGGAT Daci_4936 5458359 - 5457562 - | acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase Daci_4937 5458807 - 5458367 - | beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ Daci_4938 5459811 - 5458804 - | UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase TERM 4334 5459639 - 5459661 + g 77 -14.8 -3.15544 | opp_overlap 5459638 5459637 5459641, overlap 5459646 GGCGCCACAATAACG CAGGCCGCCT CGG AGGCGGCCAG TTGCTGGCGGTAGCG TERM 4335 5459659 - 5459641 - G 74 -16 -2.68806 | opp_overlap 5459639 5459646, overlap 5459638 5459637 CGCCACAATAACGCA GGCCGCCT CGG AGGCGGCC AGTTGCTGGCGGTAG Daci_4939 5460344 - 5459835 - | outer membrane chaperone Skp (OmpH) Daci_4940 5462641 - 5460344 - | outer membrane protein assembly complex, YaeT protein Daci_4941 5464057 - 5462687 - | membrane-associated zinc metalloprotease TERM 4336 5462775 - 5462746 - G 76 -7.1 -4.32034 | gap 1, overlap 5462748 TCATCATCATCAAAA CCGCCACGCCTGCA CGC TGCAAGCGCC-CGG CCCAGACTTCCGACA Daci_4942 5465318 - 5464140 - | 1-deoxy-D-xylulose 5-phosphate reductoisomerase Daci_4943 5466169 - 5465315 - | phosphatidate cytidylyltransferase TERM 4337 5465582 - 5465547 - G 81 -9.6 -4.28323 | gap 1 AGCAACGAATAGAAA CTGGGCACGGCCACCGC GTA GTGGCGGTC-CGCCCAG ACCCAGGCCAAGGCC Daci_4944 5466929 - 5466183 - | undecaprenyl diphosphate synthase Daci_4945 5467525 - 5466965 - | ribosome recycling factor Daci_4946 5468291 - 5467569 - | uridylate kinase Daci_4947 5469252 - 5468356 - | translation elongation factor Ts TERM 4338 5469323 - 5469304 - R 100 -10.7 -5.40072 | opp_overlap 5469303 5469304 TTTCGGCTAAAAAAA CGGGGCT ACCCTG AGCCCCG CTTCTTATTCAGCGA Daci_4948 5470118 - 5469366 - | ribosomal protein S2 Daci_4949 5470488 - 5471759 + | D-amino-acid dehydrogenase TERM 4339 5472097 - 5472059 - g 70 -8.9 -3.85817 | opp_overlap 5472058, overlap 5472039 ATGCGGCGCCAGAAA CG-GCACGCAGTTGCCGCA TTC TG-GTCAGCTGCGTGCGCG AACGCGCCCACATGC Daci_4950 5471803 - 5473380 + | carbohydrate kinase, YjeF related protein Daci_4951 5475984 - 5473387 - | ribonuclease R TERM 4340 5473696 - 5473723 + g 75 -5.5 -4.58283 | TTCAGCTTCCAGCGC GGCCAGGTTCA CCCCTT TGACCATGGCC TTTTTAGACGCCTTG TERM 4341 5473807 - 5473817 + g 89 -2.4 -5.27477 | overlap 5473806 GGAGCCTCCCGAGTT GCGC TGC GCCC TTTTTTCCTTGGCAT TERM 4342 5473890 - 5473906 + g 70 -15.1 -2.74523 | overlap 5473872 CCGGCGTCCTGCCGG GCCGGCC CGA GGCCGGC TGCTCTTCGCCATCG TERM 4343 5476369 - 5476338 - R 78 -16 -2.66695 | opp_overlap 5476343, overlap 5476343 CTGGGCACCAAACAT GAAAAGGCCGTTGC ACAC GCAACGGCCTTTTT CTTTTCTGATCGCTG TERM 4344 5476364 - 5476343 - R 100 -15.9 -4.51363 | opp_overlap 5476343, overlap 5476338 CACCAAACATGAAAA GGCCGTTGC ACAC GCAACGGCC TTTTTCTTTTCTGAT TERM 4345 5476343 - 5476364 + r 100 -15.9 -5.56263 | opp_overlap 5476343 5476338 CACCAAACATGAAAA GGCCGTTGC ACAC GCAACGGCC TTTTTCTTTTCTGAT TERM 4346 5476609 - 5476578 - R 78 -16 -2.66695 | opp_overlap 5476583, overlap 5476583 CTGGGCACCAAACAC GAAAAGGCCGTTGC ACAC GCAACGGCCTTTTT CCTTGCCTCGCCGGC TERM 4347 5476604 - 5476583 - R 100 -15.9 -4.51363 | opp_overlap 5476583, overlap 5476578 CACCAAACACGAAAA GGCCGTTGC ACAC GCAACGGCC TTTTTCCTTGCCTCG TERM 4348 5476583 - 5476604 + r 100 -15.9 -4.88407 | opp_overlap 5476583 5476578 CACCAAACACGAAAA GGCCGTTGC ACAC GCAACGGCC TTTTTCCTTGCCTCG TERM 4349 5476848 - 5476817 - R 78 -16 -2.66695 | opp_overlap 5476822, overlap 5476822 CTGGGCACCAAACAT GAAAAGGCCGTTGC ACAT GCAACGGCCTTTTT TCTTGGGCGCTGCAG TERM 4350 5476843 - 5476822 - R 100 -15.9 -4.51363 | opp_overlap 5476822, overlap 5476817 CACCAAACATGAAAA GGCCGTTGC ACAT GCAACGGCC TTTTTTCTTGGGCGC TERM 4351 5476822 - 5476843 + r 100 -15.9 -5.4505 | opp_overlap 5476822 5476817 CACCAAACATGAAAA GGCCGTTGC ACAT GCAACGGCC TTTTTTCTTGGGCGC TERM 4352 5476921 - 5476905 - R 100 -13.7 -5.41143 | opp_overlap 5476905 CATGGCGCAAAAAAA GGGAGCC AGC GGCTCCC TTCCTGGATGAGAGG TERM 4353 5476905 - 5476921 + r 78 -13.7 -3.18264 | opp_overlap 5476905 CATGGCGCAAAAAAA GGGAGCC AGC GGCTCCC TTCCTGGATGAGAGG Daci_4952 5479606 - 5476952 - | hypothetical protein Daci_4953 5483579 - 5479734 - | hypothetical protein TERM 4354 5480069 - 5480090 + g 70 -8.7 -3.85698 | gap 1 ACTCTGCCGACTTGC CGTCGCGCAG CAC CTG-GCGGCG TTTCTGGGCGAGCAG TERM 4355 5480944 - 5480886 - G 87 -17.5 -3.32268 | gap 2 GAAGTAGTCGGAGAA CTGGACCCTGCCGCCCGTCAGCACAATCG GCC CGATCTTGATGACGGGCG-C-GGGCCCGG AGGCAGCCTGCGGCG TERM 4356 5481250 - 5481227 - G 72 -13.8 -3.17723 | CGAGTCCCAAGGCAA CCGACTGGGC CTTG GCCCGGTCGG CCGTGGACTCGCTGA TERM 4357 5483727 - 5483691 - H 100 -23.2 -2.71731 | opp_overlap 5483695, overlap 5483695 GCCATCCTTGAACGA CAAAGCCCGGAAGCCG TGAGC CGGCTTCCGGGCTTTA CGGCGGGCACAAGTC TERM 4358 5483723 - 5483695 - H 100 -21.8 -4.05446 | opp_overlap 5483695, overlap 5483691 TCCTTGAACGACAAA GCCCGGAAGCCG TGAGC CGGCTTCCGGGC TTTACGGCGGGCACA TERM 4359 5483695 - 5483723 + H 100 -21.8 -3.53012 | opp_overlap 5483695 5483691 TCCTTGAACGACAAA GCCCGGAAGCCG TGAGC CGGCTTCCGGGC TTTACGGCGGGCACA TERM 4360 5484134 - 5484148 + H 100 -7.1 -5.73978 | CCTAGAATCCGCCAG CGCTC GAATA GAGCG TTTTTTGTTTCTGCT TERM 4361 5484263 - 5484286 + H 100 -18.2 -3.67976 | opp_overlap 5484248 GGGTGTCAGCCTCAC CGGCCTTCGC TTCG GCGAAGGCCG TTTCGGGTTGGTGCC TERM 4362 5484327 - 5484317 - H 80 -3.2 -5.04601 | CCTAGAAAGGAAAAA GCTA TGC CAGC GTCAGGAAAATTTTT TERM 4363 5484356 - 5484381 + G 72 -3.9 -4.66318 | overlap 5484357 TTCGCCGCCGCGCGA ACGTTCGCCAT CGAT GTGGCCAACGG TTTTCTTGCCATCAT TERM 4364 5484602 - 5484586 - g 71 -10.1 -3.68936 | overlap 5484598 GACCAACCCCAAGAA CCTGCCC AAG GAGCAGG CAGCCGTGGCCTTCT Daci_4954 5484320 - 5485231 + | lytic transglycosylase catalytic TERM 4365 5485260 - 5485275 + F 100 -10.4 -4.73388 | opp_overlap 5485258 5485254 CATAGTGAATGCACA GCTGGC CAAG GCCAGC TTTTTCATGCCCGTT TERM 4366 5486651 - 5486633 - g 78 -10.2 -4.12902 | CAACGATCCCGAAAA GCCGATGG TGA CCAGCGGC ATCCGCGTGGGCACG Daci_4955 5485578 - 5486825 + | glycine hydroxymethyltransferase Daci_4956 5486848 - 5487303 + | transcriptional regulator NrdR TERM 4367 5487342 - 5487327 - T 89 -11.8 -4.21974 | opp_overlap 5487327 GCAGGACGCAAGAAA GCCGCC CTTG GGCGGC TTTTTCTTTGGTGCC TERM 4368 5487327 - 5487342 + T 100 -11.8 -5.33405 | opp_overlap 5487327 GCAGGACGCAAGAAA GCCGCC CTTG GGCGGC TTTTTCTTTGGTGCC Daci_4957 5488538 - 5487369 - | chorismate synthase Daci_4958 5488666 - 5489163 + | AraC family transcriptional regulator TERM 4369 5489236 - 5489265 + T 82 -14.3 -3.14344 | gap 1, opp_overlap 5489236 GCGCGCAAAGACAAA GGCCTCCG-CCGCA TTT TGCGTTCGGAGGCC TTGCTGCCCAAGGTG TERM 4370 5489265 - 5489236 - T 100 -14.3 -4.32857 | gap 1, opp_overlap 5489236 GCGCGCAAAGACAAA GGCCTCCG-CCGCA TTT TGCGTTCGGAGGCC TTGCTGCCCAAGGTG Daci_4959 5489765 - 5489313 - | CBS domain-containing protein Daci_4960 5489872 - 5491170 + | O-acetylhomoserine aminocarboxypropyltransferase Daci_4961 5491193 - 5492002 + | alpha/beta hydrolase fold Daci_4962 5493514 - 5492039 - | acetamidase/formamidase TERM 4371 5493371 - 5493326 - G 76 -13.9 -3.53012 | gap 1 CGCGCCCTGGGCAAA GGCCCGGGACGGTGCCATC-GC GCC GCTGATGGCGCCGGCCGAGACC GCGCCGCCACCGACC Daci_4963 5493675 - 5496107 + | AraC family transcriptional regulator Daci_4964 5496948 - 5496121 - | alpha/beta hydrolase fold TERM 4372 5496986 - 5496958 - H 91 -4.5 -5.47821 | gap 1, overlap 5496944 5496960 AGGCATCGAAAAAAA CT-CCATGCCGG TCGGCG CCGGCCCGGCAG ACATCATGCGCCTGC TERM 4373 5497441 - 5497430 - g 81 -3.6 -4.82901 | CGGCTTCGAGAAAAA CCGG CCCG CCAG CTTCAAGCGCCCGCT Daci_4965 5497167 - 5497520 + | membrane protein Daci_4966 5498881 - 5497535 - | ribonuclease BN TERM 4374 5498478 - 5498457 - G 82 -6.5 -4.78752 | gap 1, overlap 5498458 5498459 ACCAGAATGGAAAAA CCGGCCATGC CCA GC-TGGCTGG CCTTGGAGGCGAACT Daci_4967 5498947 - 5499387 + | membrane protein-like protein TERM 4375 5499378 - 5499394 + F 71 -5.7 -4.30978 | overlap 5499353 CGCGGCCCGGGCGGC CGGCGGC TGA GTCCCCG TTTTCATGCCTTCAC Daci_4968 5499431 - 5500861 + | FAD linked oxidase domain-containing protein TERM 4376 5500893 - 5500936 + T 81 -13.8 -3.28712 | gap 1, overlap 5500864 5500897 TCTGGGGCGGCGCCA GGTTTGCACGCGCCG-TCCTG AGC CAGGAGCGGCCCGTGCCTGCC TTGTCAGGAAACCGG TERM 4377 550