TransTermHP v2.07 (built on Jan 21 2009) 25 bins; sample size is 20000000 --pval-conf=/fs/szasmg2/carlk/TTupdate2/expterm.dat --gc=-2.3 --au=-0.9 --gu=1.3 --mm=3.5 --gap=6 --max-len=59 --min-stem=4 --max-loop=13 --min-loop=3 --uwin-length=6 --uwin-require=3 --max-hp-score=-2 --max-tail-score=-2.5 --loop-penalty=1,2,3,4,5,6,7,8,9,10,11 --start-cut=0 --end-cut=25 Genes: 0.480889 %AT, 4276252 nt, 36232 terms. Intergenic: 0.562762 %AT, H2T: 655107 nt, 4840 terms; T2T: 146770 nt, 3257 terms; H2H: 222898 nt, 3065 terms. Each terminator entry starts in column 3 and is of the form: term # start - end +/- regionconf hp tail | notes Followed by the sequence of the 5' tail, 5' stem, loop, 3' stem, and 3' tail. Genes are interspersed, and start the first column. SEQUENCE gi|218556939|ref|NC_011742.1| Escherichia coli S88, complete genome (length 5032268) thrL 190 - 255 + | thr operon leader peptide TERM 1 280 - 301 + F 100 -13 -5.75342 | opp_overlap 280 GAAACACAGAAAAAA GCCCGCAC CTGACA GTGCGGGC TTTTTTTTCGACCAA TERM 2 301 - 280 - f 100 -13.7 -5.51046 | opp_overlap 280 GAAACACAGAAAAAA GCCCGCACC TGAC AGTGCGGGC TTTTTTTTCGACCAA TERM 3 654 - 642 - g 71 -3.4 -4.86731 | TTTGCCCAAATAAAA CATG TCCTG CATG GCATTAGTTTGTTGG TERM 4 2667 - 2654 - g 73 -3.7 -4.81249 | overlap 2655 GTTCAAAGTGAAAAA TGGCG AAAA CGCCC TGGCCTTCTATAGCC thrA 336 - 2798 + | fused aspartokinase I ; homoserine dehydrogenase I thrB 2800 - 3732 + | homoserine kinase TERM 5 4417 - 4453 + G 78 -12.4 -2.89793 | overlap 4414 TGCTACTACTTTGAA GCT-GTTGCGCAGCTGCC GCA GGAAGC-GCGCAACCAGC TGGTTGTCTCGGTGC thrC 3733 - 5019 + | threonine synthase TERM 6 5043 - 5069 + F 91 -8 -5.24129 | gap 1, opp_overlap 5042 CATTATCTCAATCAG GCCGGGTTTGC TTTTAT GCAG-CCCGGC TTTTTTATGAAGAAA TERM 7 5468 - 5419 - g 72 -10 -3.31054 | overlap 5410 AAACAACATTATGAA TGGCGAGGCAATCGCTGGC-ACCC ATAT GGACCGCC-GCCATCGCCGCGCCA TAACAAGCACAATGA yaaX 5233 - 5529 + | conserved hypothetical protein; putative exported protein TERM 8 5563 - 5531 - T 100 -13 -3.59087 | gap 1, opp_overlap 5537, overlap 5533 AACATCATCGCTAAA TA-TCAATGCCGGAT TACC ATCCGGCATTGACTA CAAACTTAACGCTGC TERM 9 5560 - 5533 - T 100 -17.2 -3.36991 | opp_overlap 5537, overlap 5531 CATCATCGCTAAATA TCAATGCCGGAT TACC ATCCGGCATTGA CTACAAACTTAACGC TERM 10 5537 - 5556 + T 81 -12.2 -3.06133 | opp_overlap 5533 5531 ATCGCTAAATATCAA TGCCGGAT TACC ATCCGGCA TTGACTACAAACTTA yaaA 6345 - 5569 - | conserved hypothetical protein; family UPF0246 yaaJ 7845 - 6415 - | putative amino acid sodium/proton transporter talB 8124 - 9077 + | transaldolase B TERM 11 9083 - 9114 + F 72 -9.4 -3.22102 | opp_overlap 9083, overlap 9081 9084 TCTGCTGTAATCATA CTTAGCGTGACCGG GAAG TCGGTCACGCTACC TCTTCTGAAACCTGT TERM 12 9084 - 9113 + F 84 -12.9 -2.5294 | opp_overlap 9083, overlap 9083 9081 CTGCTGTAATCATAC TTAGCGTGACCGG GAAG TCGGTCACGCTAC CTCTTCTGAAACCTG mogA 9192 - 9779 + | molybdochelatase MogA, involved in Moco biosynthesis TERM 13 9802 - 9785 - T 100 -12.7 -5.8187 | TAGCGAATAAAAAAA TCCCCCC AAGC GGGGGGA TCAGACTGATGACAA yaaH 10550 - 9984 - | conserved hypothetical protein; putative inner membrane protein associated with acetate transport TERM 14 10434 - 10424 - G 75 -6.8 -4.36914 | TGCCGCCGTAGAAAA TGCC CAT GGCA AGAATAATACCGTCC htpY 11412 - 10699 - | heat shock protein TERM 15 10844 - 10804 - G 72 -11.2 -3.07994 | TTTAACCCCATTTAA TGCTGCGC-CCACAGGGCCT CCC AGACCC-GCGCCGCGCAGCA AACCATGCCCAAGCA TERM 16 11166 - 11200 + g 90 -14.4 -2.96274 | overlap 11160 ATTTACCGTGTCCGC GCAGTTTGTTGGCGAT ACT ATCGCCACCAAAATGC TGTAATTCTCCGGCA TERM 17 11298 - 11310 + g 80 -5.5 -4.93968 | overlap 11289 TCAGTACGCTGGAGA GGCGA GTT TTGCC TTTTTCATTATGGGT yaaI 11842 - 11438 - | hypothetical protein dnaK 12214 - 14130 + | chaperone Hsp70, co-chaperone with DnaJ TERM 18 14194 - 14155 - f 87 -13.6 -2.91467 | gap 1, opp_overlap 14156 AAACGGGTAATTATA CTGACACGGGCGAAGGGGA ATT TCCTCTCCGCCCGTG-CAT TCATCTAGGGGCAAA TERM 19 14156 - 14193 + F 100 -17.1 -3.25823 | gap 1, opp_overlap 14155 AACGGGTAATTATAC TGACACGGGCGAAGGGGA ATT TCCTCTCCGCCCGTG-CA TTCATCTAGGGGCAA TERM 20 14300 - 14287 - g 71 -2.3 -4.98531 | GCGTGAAATCAAAAA GGCCT ACAA ACGCC TGGCCATGAAATACC dnaJ 14219 - 15349 + | chaperone Hsp40, co-chaperone with DnaK TERM 21 15378 - 15361 - T 100 -12.7 -4.09739 | CTAACCTCCCCAAAA GCCTGCC CGTG GGCAGGC CAGGGTAAAAACCAG TERM 22 15426 - 15447 + T 100 -13.7 -3.39449 | opp_overlap 15425 15426, overlap 15427 CGAGCACCTGTAAAG TGGCGGGGA TCAC TCCCCGCCG TTGCTCTTACTCGGA TERM 23 15447 - 15426 - T 77 -11.5 -2.74792 | opp_overlap 15426 15427, overlap 15425 CGAGCACCTGTAAAG TGGCGGGGA TCAC TCCCCGCCG TTGCTCTTACTCGGA TERM 24 15427 - 15446 + T 89 -15 -2.63348 | opp_overlap 15426 15425, overlap 15426 GAGCACCTGTAAAGT GGCGGGGA TCAC TCCCCGCC GTTGCTCTTACTCGG mokC 15663 - 15454 - | regulatory protein for HokC, overlaps CDS of hokC TERM 25 15671 - 15703 + H 73 -4.9 -4.64844 | gap 1, opp_overlap 15639 TTCTGCATATAGGGG GCCTCGGGTTGATG GTAAAA TATC-ACTCGGGGC TTTTCTCTATCTGCC ECS88_0017 16218 - 16979 + | conserved hypothetical protein; putative exported protein ECS88_0018 16963 - 18492 + | putative Cerebroside-sulfatase TERM 26 18541 - 18569 + F 100 -16.9 -4.21933 | TTAGGGCTATGCCCG CCTGATTCAGTGC TAC GCATTGAATCAGG TTCTTTTCGCGTTGA ECS88_0019 18615 - 19880 + | hypothetical protein TERM 27 20721 - 20733 + G 72 -6.2 -4.30911 | AATCTGTGTGGTGTA CGCC GCACG GGCG TTTATATTCTGGTTG nhaA 20115 - 21281 + | sodium-proton antiporter TERM 28 21297 - 21316 + F 95 -10.7 -4.59414 | CAGGACGATGTACTG GGGAGCC ATAAAC GGCTCCC TTTTCATTGTTATCA nhaR 21341 - 22246 + | DNA-binding transcriptional activator TERM 29 22298 - 22311 + T 100 -9.5 -5.40474 | opp_overlap 22298 ATGGATATAAAAAAA CCCGC CAGA GCGGG TTTTTTTACAAAGCT TERM 30 22311 - 22298 - T 100 -9.5 -5.72616 | opp_overlap 22298 ATGGATATAAAAAAA CCCGC CAGA GCGGG TTTTTTTACAAAGCT rpsT 22605 - 22342 - | 30S ribosomal subunit protein S20 yaaY 22708 - 22926 + | hypothetical protein TERM 31 23825 - 23813 - g 76 -9.1 -3.78329 | CTGGACGAACTGAAA GCGCA GAT TGCGC GTGATGAATTAACCG ribF 22934 - 23875 + | bifunctional riboflavin kinase and FAD synthetase TERM 32 24084 - 24066 - g 100 -3.1 -5.63857 | AAAAAGGCAAAAAAA CCTTCAT TCTGC ATGATGG CCCTCCTTATGCGAA TERM 33 25136 - 25113 - g 70 -5.2 -4.38712 | overlap 25114 TGCACGTTGAGAAAA TGCAACACAG CTAT CCGTGCTGCT GGCGTCATAAAACGC ileS 23918 - 26734 + | isoleucyl-tRNA synthetase TERM 34 26851 - 26817 - g 71 -9.2 -3.44848 | opp_overlap 26841, overlap 26815 TCTGGGCAGCAAATA CCTGATCCTCCAGAAC TTT GCTCTGGGGGATACGG TCCCGCTGTTCCCGT lspA 26734 - 27228 + | prolipoprotein signal peptidase (signal peptidase II) fkpB 27336 - 27785 + | FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) TERM 35 27925 - 27951 + G 70 -5.9 -4.15788 | gap 1 AACCGCTACGTGGTC GATAG-CCTGCG CGAG CGTGGGGCTATC TTTATTGAGCAGATT ispH 27787 - 28737 + | 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase, 4Fe-4S protein TERM 36 28766 - 28785 + F 100 -9.3 -5.24129 | opp_overlap 28766, overlap 28783 TAAGTTATGCGAAAA TGCCGGT CTTGTT ACCGGCA TTTTTTATGGAGAAA TERM 37 28785 - 28766 - f 82 -9.3 -4.15453 | opp_overlap 28766 28783 TAAGTTATGCGAAAA TGCCGGT CTTGTT ACCGGCA TTTTTTATGGAGAAA rihC 28803 - 29717 + | ribonucleoside hydrolase 3 ECS88_0030 29740 - 30105 + | hypothetical protein TERM 38 30114 - 30143 + F 78 -10.1 -3.70149 | opp_overlap 30113 GGCATAATGACAGAG GGTATGACGCA TCACTTTC TGCGTCATGCC TTTCACTGATATCCC dapB 30266 - 31087 + | dihydrodipicolinate reductase TERM 39 32468 - 32450 - g 71 -3 -4.84761 | overlap 32451 AGATGTTGAGAAAAA TGTGGTGA TGA TCACCGCC CAGAACCACGGTTTT carA 31542 - 32690 + | carbamoyl phosphate synthetase small subunit, glutamine amidotransferase TERM 40 33561 - 33531 - g 71 -9 -3.54424 | opp_overlap 33531 33532, overlap 33532 CGGTACTGCGTGAAA TCGGCGTTGAAACC GGT GGTTCCAACGTCCA GTTTGCGGTGAACCC TERM 41 35292 - 35273 - g 71 -9.2 -3.53012 | CCGTTCGTCTCCAAA GCCACCGG CGTA CCGCTGGC AAAAGTGGCGGCGCG carB 32708 - 35929 + | carbamoyl-phosphate synthase large subunit TERM 42 35983 - 36002 + F 100 -10 -5.60993 | opp_overlap 35983 35981 ATCGAATAACTAATA CGGTTCTC TGAT GAGGACCG TTTTTTTGTGCACAG TERM 43 36040 - 36022 - gf 100 -16 -4.52589 | TTTGTGCACAGAAAA CCCCCAGC TAG GCTGGGGG TTCCGGAAAGCTTTC ECS88_0034 35993 - 36196 + | hypothetical protein ECS88_0035 36102 - 36611 + | transposase IS605 family, IS200 group TERM 44 36690 - 36714 + F 86 -9.9 -4.43877 | opp_overlap 36693, overlap 36692 36693 ATAGGCGCATTTGAA AAACCTCCGGC TAT GCCGGAGGATA TTTATTTGCCCATTA TERM 45 36692 - 36712 + F 100 -12.5 -3.81958 | opp_overlap 36693, overlap 36690 36693 AGGCGCATTTGAAAA ACCTCCGGC TAT GCCGGAGGA TATTTATTTGCCCAT TERM 46 36711 - 36693 - f 100 -16 -4.62069 | opp_overlap 36692 36690 36693 GGCGCATTTGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTGCCCA TERM 47 36693 - 36711 + F 100 -16 -2.88452 | opp_overlap 36693, overlap 36692 36690 GGCGCATTTGAAAAA CCTCCGGC TAT GCCGGAGG ATATTTATTTGCCCA caiF 36901 - 37296 + | transcriptional activator TERM 48 37438 - 37460 + T 84 -8.4 -4.33165 | overlap 37453 TCGGCGTCACATCCG TCGTCCCC TGCAAAC GGGGGCGA TTTTCCTCCATTTGC caiE 38005 - 37415 - | putative acyl transferase caiD 38904 - 38011 - | crotonobetainyl CoA hydratase TERM 49 38502 - 38470 - G 85 -11.9 -3.60296 | opp_overlap 38461 38481, overlap 38449 38482 CAGCGCCAGTTCAAA GCCGCCGCCAAAGGC ATA GCCGTTCACAGCGGC GATGACCGGTTTGTC caiC 40473 - 38905 - | putative crotonobetaine CoA ligase:carnitine CoA ligase TERM 50 39526 - 39546 + g 78 -5.4 -4.87626 | opp_overlap 39517, overlap 39529 CAGCAAGCTAACGCC GAAGCGTT CACAA AACGCGTC TTTTTCCTGTTCCGA TERM 51 40362 - 40388 + g 75 -7.2 -4.38712 | ACCGGTTAACGACTC CGCCGCTGGATT CAC AAATCAGCGCCG TTTTATGACCGTAAA caiB 41748 - 40531 - | crotonobetainyl CoA:carnitine CoA transferase TERM 52 41780 - 41817 + r 83 -11.9 -3.21747 | opp_overlap 41770 41801, overlap 41783 41793 ATTTATGTAGCGCAT GACTGCCGGATGCGGCG TAAA CGCCTTATCCGGCCATC TTCGTGCTCCCGTAG TERM 53 41783 - 41814 + r 79 -12.2 -2.50016 | opp_overlap 41770 41801, overlap 41780 41793 TATGTAGCGCATGAC TGCCGGATGCGGCG TAAA CGCCTTATCCGGCC ATCTTCGTGCTCCCG caiA 43018 - 41876 - | crotonobetaine reductase subunit II, FAD-binding TERM 54 42156 - 42172 + g 73 -3.6 -4.7497 | overlap 42157 ATGGAGTTTAATTTG ATCGCC ATGTG GGCGAA TTTTTCCTGAATCAA caiT 44563 - 43049 - | L-carnitine/gamma-butyrobetaine antiporter TERM 55 44513 - 44541 + g 87 -4.5 -5.30339 | GACGATTATTAACGG CGGAAAGAAAACC TTC GGTTCTATTCCCG TTTTTCTCTTTTCAT TERM 56 44703 - 44718 + H 87 -6.2 -5.28942 | CAATAAGCTGCATTC TGTGAT TGTT ATCACA TTTTTGTTTCGGGTG TERM 57 44870 - 44906 + H 74 -9.7 -3.35695 | overlap 44864 TTTTGCTACGCCATG TTTTCAATATTGGTGAG GAG CTTAACAATATTGAAAG TTGGATTTATCTGCG fixA 45036 - 45806 + | putative electron transfer flavoprotein subunit, ETFP adenine nucleotide-binding domain fixB 45821 - 46762 + | putative electron transfer flavoprotein, NAD/FAD-binding domain and ETFP adenine nucleotide-binding domain-like fixC 46813 - 48099 + | putative oxidoreductase with FAD/NAD(P)-binding domain fixX 48096 - 48383 + | putative 4Fe-4S ferredoxin TERM 58 48708 - 48744 + G 70 -7.3 -4.08706 | opp_overlap 48713, overlap 48710 48714 AATGTTCCTCATTGA TATCATCGCCATCGG CGTGATA TCGGTGGCGACGATG TTTGTCTCATCCCCC TERM 59 48899 - 48917 + G 91 -12.4 -3.76379 | overlap 48913 CCGCGATGTGGTATG TCGGCGCG ACC TGCGCCGA TTTGGTCGGCTATTG yaaU 48442 - 49773 + | putative transporter kefF 49881 - 50411 + | glutathione-regulated potassium-efflux system ancillary protein KefF TERM 60 50697 - 50712 + G 72 -4.6 -4.70453 | GATGGTGATTTGCGG CGGCCT GCTG GGGCTG TTTTGTATGTTACTT TERM 61 51383 - 51373 - g 75 -6.8 -4.42062 | opp_overlap 51372 51373 51375 CAGGTGCCAAATAAA CAGC GTC GCTG GTTTGCGGTGCTGTT kefC 50404 - 52266 + | potassium:proton antiporter folA 52458 - 52937 + | dihydrofolate reductase TERM 62 53134 - 53108 - g 83 -12.3 -3.36694 | overlap 53106 ATGCAGGCTTAAATA TGAGCGCCACC CTTAC GGTTGCGCTCA ATGCTGAACTTAAAA ECS88_0052 53023 - 53256 + | putative antitoxin of gyrase inhibiting toxin-antitoxin system TERM 63 53283 - 53300 + T 81 -9.8 -3.95772 | overlap 53290 ACGGTATACCGCAGT CGCGGC AGGAAC GCCGCG TTTCCCTTTGTTATT TERM 64 53523 - 53490 - T 76 -10.9 -3.05715 | AACTGTTCCAGTTAA CGCGCTGGGAACGAA ATTT TGCGATGCCAGCGCG CACCGAACGTTGATT apaH 54419 - 53571 - | diadenosine tetraphosphatase apaG 54803 - 54426 - | protein associated with Co2+ and Mg2+ efflux TERM 65 54514 - 54535 + g 72 -8.7 -3.71527 | gap 1, overlap 54527 ATCATTTCGTAGTGA CCCTGCATGG TGC CCA-GCGGGG TTTCAATGATTGCAC TERM 66 54605 - 54587 - G 76 -11 -3.30124 | opp_overlap 54573 54587 CGCCAGGCGCGATAA GTGGCTGG ACG CCAACCAC TCCTTCGCCCTGGAC ksgA 55627 - 54806 - | S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase pdxA 56613 - 55624 - | 4-hydroxy-L-threonine phosphate dehydrogenase, NAD-dependent TERM 67 56479 - 56462 - G 73 -9.1 -3.57263 | AGGGTGAGCGGCAAA CCGAGCA TCGC TGCCCGG TCGGTAAGGAGAGTG TERM 68 56523 - 56511 - G 74 -7.7 -4.07133 | CATCGGCACAAACAA CCAGT TCG ACTGG CCACTCACGCTGTGC surA 57899 - 56613 - | peptidyl-prolyl cis-trans isomerase (PPIase) imp 60306 - 57952 - | exported protein required for envelope biosynthesis and integrity TERM 69 59804 - 59827 + g 70 -6.8 -4.10007 | gap 1, opp_overlap 59794 59804, overlap 59794 CAGGAGGTAAAGCTA CCGTTAT-CCA GAA TGGTATAGCGG TTTTCGCCACGTTGT TERM 70 60696 - 60682 - g 70 -7.1 -4.11216 | CCCGTAGCCGTAAAA TGGCG TGGTT CGCCA ACCAGCGTGAGCGTC TERM 71 60699 - 60719 + G 74 -3.1 -5.00884 | opp_overlap 60701, overlap 60707 GCGTGGTTCGCCAAC CAGCGTGAG CGT CAGGCGCTG TTTTTTGCCACCACT djlA 60561 - 61376 + | DnaJ-like protein, membrane anchored TERM 72 61451 - 61400 - T 83 -11.4 -3.30124 | GTGTAGGCCTGATAA GACGCGGTAGGCCGGATAAGACGC GCCA GCGTCGCATCCGGCGAGCAGCATC AGACAATCGGCGCAA rluA 62185 - 61526 - | pseudouridine synthase for 23S rRNA (position 746) and tRNAphe(position 32) TERM 73 61918 - 61954 + g 72 -8.6 -3.72576 | gap 1, overlap 61920 GCTTTTTCGGCTCGC GCTCGCGGAACTGGCGT TTTA ACTCCCGCTCCGCG-GC TTTGGTCAGCGCCAC TERM 74 62145 - 62121 - G 80 -11.5 -3.29273 | overlap 62119 62143 TTGACCACCATAATA TGGTCATCCTG ATA CAGGACAACCA GCCAGGGGTCCTGCG hepA 65103 - 62197 - | RNA polymerase-associated helicase protein (ATPase and RNA polymerase recycling factor) TERM 75 62246 - 62258 + g 76 -9.1 -3.77219 | TCCAGACGCCAGCCT GCCTG ATC CAGGC TTTCCATTACCTGCT polB 67618 - 65267 - | DNA polymerase II TERM 76 65333 - 65322 - G 77 -5.8 -4.64676 | overlap 65323 TTATCCTCAATAAAA GGGA GTAT TCCC TCCGCCACGGGTTGT TERM 77 67428 - 67379 - G 71 -10.7 -2.89602 | gap 1, overlap 67378 67387 GGCGCGACAGTAAAG GCCATACACCGGCTGGCGGTGAAA ATC TTTTAACGCCAGC-GGCGTCAGGC GAAAGCCTTGTTCAC TERM 78 67639 - 67659 + r 78 -8.3 -4.14598 | opp_overlap 67639 AAATCCAATAAAAAA CCAGGCT TGATTAT AGCCTGG TTTCGTTTGATTGGC TERM 79 67659 - 67639 - R 100 -8.3 -5.52096 | opp_overlap 67639 AAATCCAATAAAAAA CCAGGCT TGATTAT AGCCTGG TTTCGTTTGATTGGC araD 68388 - 67693 - | L-ribulose-5-phosphate 4-epimerase TERM 80 68471 - 68497 + r 73 -10.1 -2.99325 | opp_overlap 68461 68460, overlap 68470 AAGACGCGTCGGCGT CGCATCAGGCG GTGAA TGCCGGATGCG CTTTGCTTATCCGGC TERM 81 68556 - 68582 + r 73 -10.1 -2.99325 | opp_overlap 68543, overlap 68555 AAGACGCGCCAGCGC CGCATCAGGCG GTGAA TGCCGGATGCG CTTTGCTTATCCGGC TERM 82 68618 - 68651 + r 71 -9.5 -3.08464 | opp_overlap 68605 68628 68630 68631, overlap 68639 AATCCGGAACGCGTA GGCCTGATAAGACGC GTCA GCGTCGCATCAGGCG TTACATACCTGATGC TERM 83 68639 - 68669 + r 82 -12.6 -2.70932 | opp_overlap 68628 68631 68605 68630, overlap 68618 ATAAGACGCGTCAGC GTCGCATCAGGCGT TAC ATACCTGATGCGGC TACTTAGCGACGAAA araA 70175 - 68673 - | L-arabinose isomerase araB 71886 - 70186 - | L-ribulokinase TERM 84 70501 - 70525 + g 77 -9.9 -3.61715 | GACCTGGTTTTTCCG CGCGATGCCGC CCA GCGCCATCACG TTATTGACGGCGATC TERM 85 71995 - 71981 - H 83 -7.2 -4.87665 | TCTTATGGATAAAAA TGCTAT GGC ATAGCA AAGTGTGACGCCGTG araC 72225 - 73070 + | DNA-binding transcriptional dual regulator TERM 86 73074 - 73102 + F 100 -13.9 -3.28261 | opp_overlap 73074 73078 73081, overlap 73078 73082 GGTTGTGAATAATAA GAAAGAAGGGGGG GAA CCCCCTTGCTTTC TTCATCTGACGTTAT TERM 87 73102 - 73074 - f 100 -12.6 -3.9461 | gap 1, opp_overlap 73074 73078 73082, overlap 73078 73081 GGTTGTGAATAATAA GAAAG-AAGGGGG GGAA CCCCCTTGCTTTC TTCATCTGACGTTAT TERM 88 73078 - 73098 + F 82 -8.9 -4.29106 | opp_overlap 73074 73078 73081, overlap 73074 73082 GTGAATAATAAGAAA GAAGGGGGG GAA CCCCCTTGC TTTCTTCATCTGACG TERM 89 73097 - 73078 - f 82 -7.8 -4.57882 | opp_overlap 73078 73074 73082, overlap 73074 73081 GTGAATAATAAGAAA GAAGGGGG GGAA CCCCCTTG CTTTCTTCATCTGAC TERM 90 73094 - 73081 - f 86 -9.5 -4.37348 | opp_overlap 73078 73074 73082, overlap 73078 73074 AATAATAAGAAAGAA GGGGG GGAA CCCCC TTGCTTTCTTCATCT TERM 91 73082 - 73094 + F 80 -10.5 -3.71527 | opp_overlap 73081 73078 73074, overlap 73078 73074 ATAATAAGAAAGAAG GGGGG GAA CCCCC TTGCTTTCTTCATCT ECS88_0068 73582 - 74433 + | hypothetical protein ECS88_0069 74440 - 74862 + | hypothetical protein TERM 92 75464 - 75475 + G 70 -4.4 -4.45544 | ATTATCGGCTGCTTG CTGT GGCC ACAG TTTTACTTCCTGCCG TERM 93 75555 - 75574 + G 76 -4.2 -4.91712 | opp_overlap 75552, overlap 75557 GTGAGTTTAAATGGT TGCTGCTG GCAA CAGCGGTG TTTTTGTGGGTTGGA TERM 94 75557 - 75572 + G 70 -6.8 -4.07789 | opp_overlap 75552, overlap 75555 GAGTTTAAATGGTTG CTGCTG GCAA CAGCGG TGTTTTTGTGGGTTG yabI 75017 - 75781 + | conserved hypothetical protein; putative inner membrane protein thiQ 76593 - 75895 - | thiamin transporter subunit ; ATP-binding component of ABC superfamily thiP 78187 - 76577 - | fused thiamin transporter subunits of ABC superfamily: membrane components TERM 95 76667 - 76655 - G 78 -10.5 -3.48036 | CAGCAGCAGAATTAA CGCGG TGA CCGCG CCGTCCTGGCTGCGA TERM 96 77680 - 77643 - G 82 -3.3 -5.22943 | gap 1, opp_overlap 77644 77668, overlap 77644 ACGAAACGGAAAAAA TGCCAGCCGTGCATCCCA AGT TGGGCGGCA-AGCTGACG TTGTTCGCCGGGAAT tbpA 79146 - 78163 - | thiamin transporter subunit ; periplasmic-binding component of ABC superfamily TERM 97 79010 - 79020 + g 77 -3.2 -5.08824 | TCGCAATTACAGTCT GCTT CAA AGGC TTTTTTGACTACCGG sgrR 80965 - 79310 - | DNA-binding transcriptional regulator TERM 98 80436 - 80424 - GH 71 -2.6 -4.89063 | GGACGCAAAAAGAAA CGCC AGTGA AGCG GTGATATTTGCTGCC ECS88_0075 80934 - 81185 + | hypothetical protein TERM 99 81230 - 81252 + Tr 100 -10.6 -5.93252 | GGTGTTAATCGCCAC GCCAGCAG TGATTAT CTGCTGGC TTTTTTCTTTTTGGC leuD 81898 - 81293 - | 3-isopropylmalate isomerase subunit TERM 100 81729 - 81739 + g 72 -4.6 -4.72272 | ACGAAGTCCGGGTTT GGCT GTT GGCC TTTTTCATCCAGAAA leuC 83309 - 81909 - | 3-isopropylmalate isomerase subunit, dehydratase component TERM 101 82039 - 82068 + g 70 -9.9 -3.14132 | overlap 82042 TTGCTGGTGGAGGCG CAACGTTCGCCCG GATT CAGGCGGTCGTTG TTCATCGCCAGGCAC TERM 102 82717 - 82738 + g 74 -7.9 -4.12902 | AATTCCACCACATGC CCGGTACCG CCTG CGCTGCCGG TTTTACCAATAATTG TERM 103 82828 - 82840 + g 76 -9.1 -3.75629 | ATGGTCTTCGCCCGG CCCTG TTT CAGGG TTTGCGTTGCCAGTA leuB 84403 - 83312 - | 3-isopropylmalate dehydrogenase leuA 85974 - 84403 - | 2-isopropylmalate synthase TERM 104 85108 - 85119 + g 72 -5.8 -4.41616 | TGCGAATGCGCCGCT GCCA ACAA TGGC TTTGTTTGCCGGGAT TERM 105 86019 - 86048 + r 100 -15.1 -3.67296 | opp_overlap 86025, overlap 86025 CTCGCTTCGGGCATA AAAAAACCCGCGC AATG GCGCGGGTTTTTG TTTGACTGCGTGCTG TERM 106 86042 - 86025 - R 100 -14.1 -5.60993 | opp_overlap 86025 86019 TCGGGCATAAAAAAA CCCGCGC AATG GCGCGGG TTTTTGTTTGACTGC TERM 107 86025 - 86042 + r 100 -14.1 -5.30616 | opp_overlap 86025, overlap 86019 TCGGGCATAAAAAAA CCCGCGC AATG GCGCGGG TTTTTGTTTGACTGC leuL 86152 - 86066 - | leu operon leader peptide TERM 108 87110 - 87120 + G 70 -6.8 -4.07568 | GTACAAAATGAATTG CCTG GTT CAGG TTTTGAACCCGCGAG leuO 86810 - 87754 + | DNA-binding transcriptional activator TERM 109 87799 - 87760 - f 72 -9.4 -3.1996 | opp_overlap 87760 87793 CAAACGCTAACTGAA TGCAGAATAGGTCAGACA TCAA TGTCTGGTTTATTCTGCA TTTTTTATTGAATGT TERM 110 87760 - 87799 + F 100 -16 -5.49234 | opp_overlap 87760, overlap 87793 CAAACGCTAACTGAA TGCAGAATAGGTCAGACA TCAA TGTCTGGTTTATTCTGCA TTTTTTATTGAATGT TERM 111 87918 - 87934 + F 73 -5.1 -4.68612 | TTATTATCAATTTCA TCCTCTG TAA TGGAGGA TTTTATCGTTTCTTT TERM 112 88031 - 88043 + F 83 -6.3 -5.08824 | AGATCGGACGGTTAA TGTGT TTT ACACA TTTTTTCCGTCAAAC TERM 113 89385 - 89375 - g 70 -6.8 -4.07885 | CACTGGGCGTCAAAA TGGC GTT GCCA GAAGAAACCGTGGTT ilvI 88072 - 89796 + | acetolactate synthase III, large subunit ilvH 89799 - 90290 + | acetolactate synthase III, thiamin-dependent, small subunit TERM 114 90316 - 90336 + F 100 -9.7 -5.41143 | AATGCGCAATTTGCA GCCCAACAT GTC ACGTTGGGC TTTTTTTGCGAAATC TERM 115 90382 - 90372 - f 71 -4.6 -4.65747 | GAACCTGGAATAAAA GCAG TTG CCGC AGTTAATTTTCTGCG fruR 90470 - 91474 + | DNA-binding transcriptional dual regulator TERM 116 91521 - 91488 - f 74 -5.9 -4.64334 | gap 1, opp_overlap 91491, overlap 91475 91489 91491 AAGCCGCGAACAAAA GTACGCGCCAG-GTGA ATT TCTCTCTGGCGCGTTG AGTACGGGAATGGAC TERM 117 91520 - 91489 - f 74 -9.4 -3.37877 | gap 1, opp_overlap 91491, overlap 91475 91488 91491 AGCCGCGAACAAAAG TACGCGCCAG-GTGA ATT TCTCTCTGGCGCGTT GAGTACGGGAATGGA TERM 118 91518 - 91491 - f 83 -12 -3.25538 | gap 1, opp_overlap 91491, overlap 91475 91489 91488 CCGCGAACAAAAGTA CGCGCCAG-GTGA ATT TCTCTCTGGCGCG TTGAGTACGGGAATG TERM 119 91491 - 91518 + F 81 -12 -3.05596 | gap 1, opp_overlap 91475 91491 91489 91488 CCGCGAACAAAAGTA CGCGCCAG-GTGA ATT TCTCTCTGGCGCG TTGAGTACGGGAATG mraZ 92076 - 92534 + | hypothetical protein TERM 120 92869 - 92880 + G 70 -3.6 -4.61873 | CCGCAACTTGATGAT GCTG AGCG CGGC TTTTCCTTTATGCGC mraW 92536 - 93477 + | S-adenosyl-dependent methyltransferase activity on membrane-located substrates TERM 121 93534 - 93552 + G 72 -10.2 -3.35996 | overlap 93551 ATGGGAAGCCACGAG CGCCATGC CTT GCCTGGCG TTATCGGTGACGATC TERM 122 93798 - 93785 - g 76 -8.1 -4.20932 | opp_overlap 93784 93782 AATAGCCACGGAAAA GCTGC AAAT GCAGC ATGTTGATCCGTCAC ftsL 93474 - 93839 + | membrane bound cell division protein at septum containing leucine zipper motif TERM 123 93902 - 93922 + G 78 -7.6 -4.37734 | opp_overlap 93902 93900 93903, overlap 93903 ACGTCAGGAAGAACA TGCCAACT TTATC AGTTGGCG TTTTGCGTTGTTATG TERM 124 95421 - 95442 + G 72 -8.7 -3.7941 | gap 1, opp_overlap 95390, overlap 95424 GTTGCGCCTGCGAGT CAGCC-GCGC TTC GCGCTGGTTG TTGTTATCAACGATC TERM 125 95424 - 95439 + G 70 -6.8 -4.02817 | gap 1, opp_overlap 95390, overlap 95421 GCGCCTGCGAGTCAG CC-GCGC TTC GCGCTGG TTGTTGTTATCAACG TERM 126 95480 - 95498 + G 73 -11.6 -2.67171 | opp_overlap 95477 95474, overlap 95477 95479 95478 95494 GGGTAAATACTACGG CGGCGCCG TTT CCGCGCCG GTCTTTGGTGCCATC ftsI 93855 - 95621 + | transpeptidase involved in septal peptidoglycan synthesis (penicillin-binding protein 3) TERM 127 96719 - 96709 - g 81 -6.8 -4.62783 | overlap 96710 GATGCACTGGAAAAA GCCT TAC AGGC GGCGCGCCTGCACTG murE 95608 - 97095 + | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate:meso-diaminopimelate ligase TERM 128 97523 - 97502 - g 77 -10.1 -3.6849 | opp_overlap 97501 AGGCAATCTCAATAA CGACATCGG TGTA CCGATGACG CTGTTGCGCTTAACG TERM 129 98290 - 98272 - g 70 -5.2 -4.41348 | opp_overlap 98286, overlap 98276 GTGTGGGTAAACAAA GCCATGCT ATC AGCACCGC CAGCGGCGTTGGCGA murF 97092 - 98450 + | UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase TERM 130 99037 - 99059 + G 74 -9.9 -3.5241 | gap 1, opp_overlap 99019, overlap 99035 GACCGATGGTCTCGA CGGTCTGGCA ATTA TGCC-GACCG TATTTGTCGCCGGTG mraY 98444 - 99526 + | phospho-N-acetylmuramoyl-pentapeptide transferase TERM 131 99566 - 99583 + G 70 -6.2 -4.20783 | ATGTCGTCATTATCG GCCTGG GCCTCA CCGGGC TTTCTTGCGTGGACT TERM 132 99608 - 99628 + G 72 -10.3 -3.35996 | TGGACTTTTTCCTCG CTCGCGGTG TGA CGCCGCGCG TTATGGATACGCGTA TERM 133 100156 - 100143 - g 72 -6.7 -4.2828 | opp_overlap 100143, overlap 100127 GCGCATTTACGAAAA CGCAA AAGT TTGCG TGGTTAATGCTGATG murD 99529 - 100845 + | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase ftsW 100845 - 102089 + | integral membrane protein involved in stabilizing FstZ ring during cell division TERM 134 102594 - 102609 + G 73 -9 -3.65351 | ATGTGCTGGCGCTGC CGTTGC CGCA GCAACG TTTGGCTGGACGTGA murG 102086 - 103153 + | N-acetylglucosaminyl transferase murC 103207 - 104682 + | UDP-N-acetylmuramate:L-alanine ligase ddlB 104675 - 105595 + | D-alanine:D-alanine ligase ftsQ 105597 - 106427 + | membrane anchored protein involved in growth of wall at septum ftsA 106424 - 107686 + | ATP-binding cell division protein involved in recruitment of FtsK to Z ring ftsZ 107747 - 108898 + | GTP-binding tubulin-like cell division protein TERM 135 109443 - 109453 + G 74 -3.2 -5.01546 | TGGGCTGAATTTAAG CCGT ACA ATGG TTTTTCTCTGGATTT TERM 136 109843 - 109833 - g 70 -6.8 -4.07568 | GCTGTCCTTGCAAAA CAGG AAG CCTG GGAATATGTGACCTT lpxC 108999 - 109916 + | UDP-3-O-acyl N-acetylglucosamine deacetylase TERM 137 109943 - 109986 + F 100 -4.5 -6.17292 | opp_overlap 109943 109955 CTGTCGTATAAAATT CGACTGGCAAATCTGGC ACTCTCTCCG GCCAGGTGAACCAGTCG TTTTTTTTTGAATTT secM 110147 - 110659 + | regulator of secA translation TERM 138 112496 - 112509 + G 75 -4.5 -4.8622 | opp_overlap 112496 CCTGTCGATGGAAGA TGCGC TGAT GCGTA TTTTTGCTTCCGACC secA 110721 - 113426 + | preprotein translocase subunit, ATPase TERM 139 113465 - 113448 - f 100 -12.7 -4.42639 | opp_overlap 113448 ACAGTTGAAGTAAAA GGCGCAG GATT CTGCGCC TTTTTTATAGGTTTA TERM 140 113448 - 113465 + F 100 -12.7 -5.33866 | opp_overlap 113448 ACAGTTGAAGTAAAA GGCGCAG GATT CTGCGCC TTTTTTATAGGTTTA TERM 141 113713 - 113696 - g 70 -4.1 -4.62069 | overlap 113698 TCGCTATTTGAAAAA CTGGAAT ATGA ATTCCCG GACAGGCATATAACT mutT 113486 - 113884 + | nucleoside triphosphate pyrophosphohydrolase, marked preference for dGTP TERM 142 113966 - 113917 - T 100 -19.4 -2.63301 | opp_overlap 113924 113925, overlap 113886 GACATTTGCATATGA TGCCTGATGCGACGCTGGCGCG TTTTAT CAGGCCAGCGTCGCATCAGATA GAATGTCACTGCTTT yacG 114169 - 113972 - | hypothetical protein yacF 114922 - 114179 - | hypothetical protein TERM 143 114534 - 114524 - G 70 -6.8 -4.08485 | TGTAGGTAAATCAAA GCTG CAA CAGC CGCCCGGGATGCTCA TERM 144 114604 - 114634 + g 91 -11.1 -4.21462 | GAAATTGCCCGATAC GCGGCGCGGAG ATTAATACG CTCCCCGCCGC TTTTAACTGCTGAAT coaE 115542 - 114922 - | dephospho-CoA kinase TERM 145 115246 - 115297 + g 74 -2.3 -5.0916 | gap 2, opp_overlap 115272 AGTAGCTTGCTGGAT CTGGTGTTGCGTCTCTTGCTGAATC AGCG GATGCAGCA-GGG-CGTTAAGCCAG TTTTTCTCTTCCGGG TERM 146 115515 - 115480 - G 76 -9 -3.81951 | overlap 115481 TCCGAGATTAGCAAA CGCATTGGCAACGGTA CTCT TGCCACTGCCAATGCC TCCCGTTAAGGCAAC TERM 147 115514 - 115481 - G 78 -12.5 -2.88849 | overlap 115480 CCGAGATTAGCAAAC GCATTGGCAACGGTA CTCT TGCCACTGCCAATGC CTCCCGTTAAGGCAA guaC 115767 - 116810 + | GMP reductase TERM 148 116819 - 116844 + T 100 -16.2 -3.36671 | opp_overlap 116804 116819 CCTGTAATATACCAA CGCTGGCGTG GAGCAA CACGCCAGCG TTATCCCATTCCACT TERM 149 116844 - 116819 - T 100 -16.2 -3.37493 | opp_overlap 116819, overlap 116804 CCTGTAATATACCAA CGCTGGCGTG GAGCAA CACGCCAGCG TTATCCCATTCCACT hofC 118047 - 116845 - | assembly protein in type IV pilin biogenesis, transmembrane protein hofB 119422 - 118037 - | putative protein transport with triphosphate hydrolase domain TERM 150 118102 - 118115 + g 74 -8.1 -4.08064 | TTAAGCCTTGCTCCA CGGCT AGGC AGCCG TTTTCAAAAAGCGTT TERM 151 118131 - 118155 + g 71 -9.2 -3.55622 | TTTTCAAAAAGCGTT CGCATACCCG CCTGT CGGGCGTGCG TTTCCAGCGATTCAA ppdD 119872 - 119432 - | putative major pilin subunit TERM 152 119825 - 119812 - G 70 -6.7 -4.08692 | CAATGGCGCTTAAAA TGGCA ATGA TGCCA ATAACCACCATCAGT TERM 153 120035 - 120066 + r 86 -13.2 -3.06261 | gap 1, overlap 120037 AGTTGGGGAAGGGGA GATTTATCCGC-CCG CGA TGGAGCGGATAAATC TGTTAGCAATTAGCG TERM 154 120037 - 120064 + r 73 -10 -3.08867 | gap 1, overlap 120035 TTGGGGAAGGGGAGA TTTATCCGC-CCG CGA TGGAGCGGATAAA TCTGTTAGCAATTAG nadC 120969 - 120076 - | quinolinate phosphoribosyltransferase TERM 155 120341 - 120363 + g 82 -7.6 -4.57073 | TCGACTTCTACTGGC GCATCCGGGT GCA ACCAGGACGC TTTTTCGACCGCCTG ampD 121057 - 121608 + | N-acetyl-anhydromuranmyl-L-alanine amidase ampE 121605 - 122459 + | conserved hypothetical protein; putative inner membrane protein TERM 156 122494 - 122466 - T 72 -10.2 -2.84325 | overlap 122463 TTGGTGTAAAGATTA TTGCCCTCACCC TGCAC GGGTGAGGGCGT AGAGAGATTAATGCG aroP 123872 - 122502 - | aromatic amino acid transporter TERM 157 124562 - 124537 - g 77 -11.9 -3.18264 | opp_overlap 124537 CTTTGCACTCACCAA CGCCATTACCA GTAC TGGTAAAGGCG TTAATCTACAGGGGC TERM 158 124537 - 124562 + G 77 -11.9 -3.25823 | opp_overlap 124537 CTTTGCACTCACCAA CGCCATTACCA GTAC TGGTAAAGGCG TTAATCTACAGGGGC TERM 159 125465 - 125449 - g 70 -6.5 -4.2558 | overlap 125450 TACGCCGTATGAAAA CGTCCGC GTG GCGAACA TGCAGTGGAACGAGC TERM 160 125574 - 125551 - g 81 -9.6 -4.09685 | overlap 125552 CTGGACGCCGGAAAA TCCGGAACAT GGGT ATGTTCCGGG CCATACCGGTAACGA TERM 161 125573 - 125552 - g 83 -13.1 -3.05597 | overlap 125551 TGGACGCCGGAAAAT CCGGAACAT GGGT ATGTTCCGG GCCATACCGGTAACG ECS88_0115 124400 - 126181 + | conserved hypothetical protein in uropathogenic strain containing a pyocin/colicin endonuclease-like domain (usp-like) TERM 162 126287 - 126271 - g 70 -5.2 -4.32903 | ATGAAAGATGGAAAA TCCTTA AAAGG TAAGGA GCTAGAAATGTACTG ECS88_0116 126184 - 126468 + | Putative Colicin E7 immunity protein (ImmE7) (Microcin E7 immunity protein) TERM 163 126523 - 126495 - f 70 -9 -3.18086 | opp_overlap 126495 126497, overlap 126497 AAACTATATATGGAA CATCATCGCATC TGGCT AATGCGATGATA TTAATGACATAAAAT TERM 164 126521 - 126497 - f 72 -9.4 -3.14393 | opp_overlap 126497 126495, overlap 126495 ACTATATATGGAACA TCATCGCATC TGGCT AATGCGATGA TATTAATGACATAAA ECS88_0118 126876 - 127166 + | Putative Colicin E7 immunity protein (ImmE7) (Microcin E7 immunity protein) TERM 165 127193 - 127221 + F 72 -9.7 -3.16683 | opp_overlap 127193 127186 AAACTATATATGGAA CATCATCGCGT CTGGCTA ATGCGATGATG TTAATAACATAAAAT TERM 166 127680 - 127668 - g 78 -7.7 -4.37506 | ACTAGCAAAGATAAA TCCCT AAA AGGGA AAAAATTAGAAAAAT ECS88_0120 127569 - 127865 + | Putative Colicin E7 immunity protein (ImmE7) (Microcin E7 immunity protein) pdhR 128321 - 129085 + | DNA-binding transcriptional dual regulator ECS88_0122 129264 - 129082 - | hypothetical protein TERM 167 129209 - 129155 - Gf 70 -7.3 -3.90291 | gap 1, opp_overlap 129176, overlap 129156 129159 129162 AGCGCGGCAACTAAA CGTAGAACCTGTCTTATTGAGCTTTC CGGC GAGAGTTCAATGGGACAGGTTCCA-G AAAACTCAACGTTAT TERM 168 129206 - 129159 - Gf 77 -11.4 -2.70979 | opp_overlap 129176, overlap 129155 129156 129162 CGGCAACTAAACGTA GAACCTGTCTTATTGAGCTTTC CGGC GAGAGTTCAATGGGACAGGTTC CAGAAAACTCAACGT TERM 169 129465 - 129453 - gH 79 -9.1 -3.9461 | opp_overlap 129452 CCCGTTGAAGAACAA CCGGA GTA TCCGG GTAATCTGGAACTGG aceE 129246 - 131909 + | pyruvate dehydrogenase, decarboxylase component E1, thiamin-binding TERM 170 132237 - 132206 - g 75 -11.4 -3.12788 | overlap 132200 132203 132204 GAGAAGAAAGAAGCA GCTCCGGCAGCAGC ACCA GCGGCTGCCGCGGC AAAAGACGTTAACGT aceF 131924 - 133816 + | pyruvate dehydrogenase, dihydrolipoyltransacetylase component E2 TERM 171 133844 - 133823 - f 93 -11.5 -4.43477 | opp_overlap 133825, overlap 133825 GTGATGTAAGTAAAA GAGCCGGCC CAAC GGCCGGCTT TTTTCTGGTAATCTC TERM 172 133825 - 133842 + F 100 -14.1 -5.32882 | opp_overlap 133825 133823 GATGTAAGTAAAAGA GCCGGCC CAAC GGCCGGC TTTTTTCTGGTAATC TERM 173 133842 - 133825 - f 100 -14.1 -3.82321 | opp_overlap 133825, overlap 133823 GATGTAAGTAAAAGA GCCGGCC CAAC GGCCGGC TTTTTTCTGGTAATC TERM 174 134887 - 134859 - g 75 -5.1 -4.66833 | GCCGAACGGTAAAAA CCTCGACGCAGGC AAA GCTGGCGTGGAAG TTGACGACCGTGGTT lpd 134023 - 135447 + | lipoamide dehydrogenase, E3 component is part of three enzyme complexes TERM 175 135477 - 135505 + T 71 -8.1 -3.7282 | opp_overlap 135480 135483 GAACATCCTGCAAAT TAAGAAGCGGCTA TTC TGGCCGCTTCAGA TTGTTGATAAAGTGC TERM 176 135502 - 135480 - T 88 -12 -3.51708 | opp_overlap 135477, overlap 135483 CATCCTGCAAATTAA GAAGCGGCTA TTC TGGCCGCTTC AGATTGTTGATAAAG TERM 177 135499 - 135483 - T 72 -7.9 -3.89354 | opp_overlap 135477, overlap 135480 CCTGCAAATTAAGAA GCGGCTA TTC TGGCCGC TTCAGATTGTTGATA TERM 178 135655 - 135671 + T 83 -6.5 -5.03314 | TGTCATCAGTCTTAA GCGGC TAACAAC GCCGC TTTTTTACGCCTGCA yacH 137446 - 135689 - | hypothetical protein TERM 179 135841 - 135826 - G 70 -4.7 -4.56597 | CTTTCTCTCGAAAAA CCTGA CGCTGC TCAGG CGAGGCAGACTGGAT TERM 180 137576 - 137564 - H 72 -7.7 -3.86346 | GGATTCGTTGAGAAA GGTGA TTA TCACC ATGCGAATTAACGAA TERM 181 137919 - 137908 - g 77 -7.2 -4.57837 | overlap 137909 137910 AGAGCTGCTGAAAAA CCCG CCCG CGGG CGAAGAAGAATTCCT TERM 182 139999 - 139985 - g 72 -7.8 -3.87815 | CTGGATGCGCACAAA GGTCAG TTG CCGACC CGCCTGTGGGTGGCA acnB 137801 - 140398 + | bifunctional aconitate hydratase 2 and 2-methylisocitrate dehydratase TERM 183 140434 - 140459 + F 100 -12.7 -5.72622 | gap 1, opp_overlap 140426 140434 GCATAAACGACACAA TGCCCGGTGAAT GAG ATTC-CCGGGCA TTTTTTATTTCTAAA TERM 184 140459 - 140434 - f 95 -12.7 -3.66897 | gap 1, opp_overlap 140434, overlap 140426 GCATAAACGACACAA TGCCCGGTGAAT GAG ATTC-CCGGGCA TTTTTTATTTCTAAA yacL 140573 - 140935 + | hypothetical protein TERM 185 140968 - 140941 - T 100 -17.1 -4.02535 | GCAGAAGTAAGTAAA TCAGGCGGAGC CTCCGT GCTCCGCCTGA GACGTTAAACAGCGG speD 141767 - 140973 - | S-adenosylmethionine decarboxylase speE 142649 - 141783 - | spermidine synthase (putrescine aminopropyltransferase) TERM 186 142731 - 142706 - RH 74 -10.5 -3.24255 | opp_overlap 142706 142708, overlap 142699 142708 CAACATAATAGCTAA CATTGACCGCG GATG CACGGTCAATA TTTCTACAAAAAGGT TERM 187 142729 - 142708 - RH 78 -10.9 -3.17362 | opp_overlap 142706 142708, overlap 142706 142699 ACATAATAGCTAACA TTGACCGCG GATG CACGGTCAA TATTTCTACAAAAAG TERM 188 142708 - 142729 + rH 71 -8.7 -3.51934 | opp_overlap 142708 142706 142699, overlap 142706 ACATAATAGCTAACA TTGACCGCG GATG CACGGTCAA TATTTCTACAAAAAG yacC 143273 - 142755 - | hypothetical protein TERM 189 143222 - 143232 + gH 76 -4 -4.88918 | GGGGAAGGACTATGC TCAA CGT TTGA TTTTGTTTCGCCTGC TERM 190 144653 - 144641 - gR 70 -5.5 -4.3739 | overlap 144648 TATCTTGTCAGAAAA TGGCA AAC CGCCA GCGACGCATCGTGCA cueO 143268 - 144818 + | multicopper oxidase (laccase) TERM 191 144860 - 144837 - TR 83 -11 -3.57462 | opp_overlap 144839, overlap 144839 GACCGTATTCGGAAA TATGCCCGGA TCTC TCCGGGCATT ATGGTTACTTCACAT TERM 192 144839 - 144858 + Tr 100 -13.6 -3.56727 | opp_overlap 144837 144839 CCGTATTCGGAAATA TGCCCGGA TCTC TCCGGGCA TTATGGTTACTTCAC TERM 193 144858 - 144839 - TR 100 -13.6 -3.36515 | opp_overlap 144839, overlap 144837 CCGTATTCGGAAATA TGCCCGGA TCTC TCCGGGCA TTATGGTTACTTCAC gcd 147255 - 144865 - | glucose dehydrogenase hpt 147461 - 147997 + | hypoxanthine phosphoribosyltransferase can 148700 - 148038 - | carbonic anhydrase TERM 194 149323 - 149339 + G 70 -3.5 -4.60924 | TGGATATTGAACTTC GCCGCTC AAT GTGGGGC TTTTTGAAGGATTTA yadG 148809 - 149735 + | putative transporter subunit: ATP-binding component of ABC superfamily yadH 149732 - 150502 + | putative transporter subunit: membrane component of ABC superfamily TERM 195 150509 - 150538 + F 80 -9.3 -4.10657 | overlap 150510 CGTAGCTAAGGCTAT TTCCTCTCCTCTG GATT TGGGGGAGAGGAG TTTTGACGGCTATCA TERM 196 150510 - 150537 + F 76 -10.6 -3.06073 | overlap 150509 GTAGCTAAGGCTATT TCCTCTCCTCTG GATT TGGGGGAGAGGA GTTTTGACGGCTATC yadI 150607 - 151047 + | putative PTS Enzyme IIA yadE 151111 - 152340 + | putative exported polysaccharide deacetylase panD 152724 - 152344 - | aspartate 1-decarboxylase TERM 197 152423 - 152407 - G 73 -9.4 -3.63744 | opp_overlap 152391 152417, overlap 152405 GTCGCCTTCAAAATA GGCGAC GTTGG GTCGCC AGGTGCGAGCTTCTT TERM 198 152757 - 152771 + H 85 -11.4 -3.56099 | opp_overlap 152757 CCTGTCGTTAACGAA GCAGGC GAT GCCTGC TTTGAGGAAATTCTC TERM 199 152771 - 152757 - H 83 -11.4 -3.33696 | opp_overlap 152757 CCTGTCGTTAACGAA GCAGGC GAT GCCTGC TTTGAGGAAATTCTC TERM 200 153017 - 153033 + G 88 -12.3 -3.61889 | opp_overlap 153019 ATGCACCGAGTACCA CACCGCA TGA TGCGGTG TTTAAACAATTTTTA yadD 152998 - 153882 + | putative transposase TERM 201 153959 - 153929 - T 85 -12 -3.3482 | overlap 153932 TAACGTGGCAATGAA TAACTGGCGCCA TCAGCCG TAGCGCCAGTTA AGCATTACGCCAGTT TERM 202 153956 - 153932 - T 77 -9.3 -3.81146 | overlap 153929 CGTGGCAATGAATAA CTGGCGCCA TCAGCCG TAGCGCCAG TTAAGCATTACGCCA panC 154815 - 153964 - | pantothenate synthetase panB 155621 - 154827 - | 3-methyl-2-oxobutanoate hydroxymethyltransferase TERM 203 155693 - 155729 + r 95 -13 -3.30243 | opp_overlap 155688, overlap 155695 155696 155698 GGGGCAATGATTTAT CCGTATCGCACCGCCG TTGTC TGGCGGTGCGATAGTG TTATCAGGGGTAGGT TERM 204 155695 - 155727 + r 95 -14.2 -3.21924 | opp_overlap 155688, overlap 155693 155696 155698 GGCAATGATTTATCC GTATCGCACCGCCG TTGTC TGGCGGTGCGATAG TGTTATCAGGGGTAG TERM 205 155696 - 155726 + r 100 -17.7 -2.5294 | opp_overlap 155688, overlap 155695 155693 155698 GCAATGATTTATCCG TATCGCACCGCCG TTGTC TGGCGGTGCGATA GTGTTATCAGGGGTA TERM 206 155698 - 155724 + r 100 -15.9 -2.80074 | opp_overlap 155688, overlap 155696 155695 155693 AATGATTTATCCGTA TCGCACCGCCG TTGTC TGGCGGTGCGA TAGTGTTATCAGGGG ECS88_0145 157022 - 155733 - | putative exported protein yadC, putative fimbrial-like adhesin protein TERM 207 155942 - 155952 + g 83 -5.4 -5.055 | TCAGTACCATTTGTG CACT TTT AGTG TTTTTTAAACCTTCA TERM 208 156983 - 156997 + g 85 -7.2 -4.77759 | opp_overlap 156982 AAAAAAGAAAGTATC TGAAGA ATA TCTTCA TTTTTACTCCATTGT TERM 209 157014 - 157039 + g 76 -7.6 -4.28067 | opp_overlap 157028, overlap 157009 157015 TTTTACTCCATTGTC ATGCTGCAAG ATAATG CTTGCAGCAC TTTGTCTGTTATTCG TERM 210 157015 - 157038 + g 74 -11.1 -3.15756 | opp_overlap 157028, overlap 157009 157014 TTTACTCCATTGTCA TGCTGCAAG ATAATG CTTGCAGCA CTTTGTCTGTTATTC ECS88_0146 157644 - 157048 - | protein yadK, putative fimbrial-like adhesin TERM 211 157509 - 157522 + g 71 -3.1 -4.8277 | CGTTGTTGCTGATTC CACTT TGGC AGGTG TTATTTTTTATATTT ECS88_0147 158285 - 157671 - | putative fimbrial-like adhesin protein YadL ECS88_0148 158857 - 158291 - | putative fimbrial-like adhesin protein YadM TERM 212 158807 - 158832 + g 77 -6.3 -4.5954 | opp_overlap 158795 158810 AAATACCGAAGGCGA TAACAATAGTC CCAT GAGTATTGTTA TTTTATGTGGTGTGA htrE 161462 - 158874 - | outer membrane usher protein TERM 213 159964 - 159989 + g 81 -10.5 -3.60296 | ACCGTGACCTGATTT TTCATGCGCGA GTAA TTGCGCATGGA TTTAGGCTCAAGATC TERM 214 160222 - 160210 - G 79 -4.7 -4.99638 | opp_overlap 160209 160212, overlap 160211 160212 ACATCGACAGAAAAA GCCCC CAC GGGGG TATTCATACCAAGCC ecpD 162237 - 161497 - | periplasmic pilin chaperone TERM 215 161563 - 161552 - G 81 -4.4 -5.055 | TTAATGGCGAAAAAA TGCA CTTT TGCA GAGCTTGTTCTGCCA yadN 162960 - 162346 - | putative fimbrial-like adhesin exported protein folK 163777 - 163298 - | 2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase pcnB 165192 - 163774 - | poly(A) polymerase I yadB 166157 - 165231 - | glutamyl-Q tRNA(Asp) synthetase TERM 216 165519 - 165509 - G 81 -6.8 -4.65895 | opp_overlap 165511, overlap 165510 165511 CTTTCCAGCCAAAAA GCTG GTA CAGC GAGATTTGCCGCACC TERM 217 166168 - 166144 - G 91 -5.6 -5.4505 | opp_overlap 166147, overlap 166147 TCTTTGAACAAAAAA TAAGGCGGGA GCATT TCCCGCCTGT GGTAAACGTGATGGA TERM 218 166147 - 166165 + g 77 -12.4 -2.79302 | opp_overlap 166144 166147 TTGAACAAAAAATAA GGCGGGAG CAT TTCCCGCC TGTGGTAAACGTGAT TERM 219 166165 - 166147 - G 100 -11.7 -4.81306 | opp_overlap 166147, overlap 166144 TTGAACAAAAAATAA GGCGGGA GCATT TCCCGCC TGTGGTAAACGTGAT dksA 166649 - 166194 - | DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein sfsA 167531 - 166827 - | putative regulator TERM 220 167174 - 167195 + g 77 -6.6 -4.48175 | gap 1, opp_overlap 167174 167169, overlap 167188 GCAACATAAAGTCAA TACGGCTGC GTTCG GC-GCCGTA TTTTACTTCGCTTTT TERM 221 167489 - 167479 - G 83 -5.4 -5.02476 | ACATCGGCTAAAAAA CGTT TGT AACG CTGAATTAGCGTCGC ligT 168076 - 167546 - | 2'-5' RNA ligase TERM 222 167795 - 167783 - G 74 -10.5 -3.15544 | CGCCAGCTGGATTAA GCCGC GTG GCGGC TGTCGCATCCCTAAC TERM 223 167914 - 167893 - G 70 -7.3 -4.07568 | opp_overlap 167893 TCCGTCCGGCTAAAA GAGAAAGCG CCTT CTCTTTCTC TGCGCTCACTTCGCC hrpB 168150 - 170579 + | ATP-dependent (RNA) helicase TERM 224 172043 - 172029 - g 71 -3.4 -4.83615 | GACGCGGCAGAAAAA GCCGCC GTG GAAGGC ATTCCGGCACTGAAG mrcB 170673 - 173207 + | fused glycosyl transferase ; transpeptidase TERM 225 173247 - 173225 - f 89 -14.9 -2.89742 | TCTAAGCGTGATATA CCGGATGGC GAGCT GCCATCCGG TAAAATAACATCCCC TERM 226 173332 - 173351 + F 75 -9.2 -3.68662 | GCGCAGATTGCGTAC CGCTTGCG AACC CGCCAGCG TTTCGAATATTATCT TERM 227 174790 - 174771 - g 85 -11.4 -3.66654 | opp_overlap 174764 GACTTCAATGCGAAA GACCCGGA TAAC TCCGGGCC GTACCGCATTCTGAA fhuA 173427 - 175670 + | ferrichrome outer membrane transporter TERM 228 175681 - 175702 + F 87 -11.5 -3.5774 | overlap 175682 TCTAATTTCTCTTTT GGGGCACGG ATTT CCGTGCCCG TTTCACAAGTTGGCT TERM 229 175682 - 175701 + F 89 -15 -2.74322 | overlap 175681 CTAATTTCTCTTTTG GGGCACGG ATTT CCGTGCCC GTTTCACAAGTTGGC fhuC 175721 - 176518 + | iron-hydroxamate transporter subunit ; ATP-binding component of ABC superfamily TERM 230 176541 - 176569 + G 70 -6.6 -4.02856 | gap 1 CTTACCTCTTATTTC GCGCCGCCGACTG TTAA CGG-CGATGGCGC TTTCTCCGTTGTTAT fhuD 176518 - 177408 + | iron-hydroxamate transporter subunit ; periplasmic-binding component of ABC superfamily TERM 231 177547 - 177561 + G 72 -4.3 -4.66163 | CGCCGGATATTGACG TCATC GAGCA GATGA TTTTTCACTACAGCT fhuB 177405 - 179387 + | fused iron-hydroxamate transporter subunits of ABC superfamily: membrane components TERM 232 179415 - 179393 - T 100 -19.2 -3.17392 | GAGCCGTTAATTGAA TGCCTCGCCC GGT GGGCGAGGCA AAATCATCACAACTT hemL 180702 - 179422 - | glutamate-1-semialdehyde aminotransferase (aminomutase) TERM 233 180979 - 180955 - g 88 -11.4 -3.85698 | overlap 180958 CTCCCTCTTTAGAAA CACCGCAGGC CGCGC GCCTGCGACG CAGACAACTGATTCG TERM 234 180976 - 180958 - g 73 -11.7 -2.70946 | overlap 180955 CCTCTTTAGAAACAC CGCAGGC CGCGC GCCTGCG ACGCAGACAACTGAT TERM 235 181497 - 181515 + G 81 -4.4 -5.14682 | overlap 181499 CTGGCTGCGGCCTTT AACGCGCC GCT GGCGGGTA TTTTGTTTATTATCG TERM 236 181499 - 181513 + G 72 -7 -4.18024 | overlap 181497 GGCTGCGGCCTTTAA CGCGCC GCT GGCGGG TATTTTGTTTATTAT clcA 180927 - 182348 + | chloride channel, voltage-gated TERM 237 182636 - 182622 - g 75 -5.6 -4.68994 | opp_overlap 182622 ATGACCATCGAAAAA CAGGGC GTT GGCCTG GTGGTTGATCCGATG yadR 182430 - 182774 + | putative chaperone involved in Fe-S cluster assembly and activation; hesB-like TERM 238 182781 - 182815 + T 73 -10 -3.06696 | overlap 182786 AGTATCTAATCTGCT GTTCATGTGCCGGATA AAC TATCCGGCACATCTCC TCTCTTCAACGACCA TERM 239 182786 - 182810 + T 100 -17.3 -2.92175 | overlap 182781 CTAATCTGCTGTTCA TGTGCCGGATA AAC TATCCGGCACA TCTCCTCTCTTCAAC yadS 183444 - 182821 - | conserved hypothetical protein; putative inner membrane protein btuF 184282 - 183482 - | vitamin B12 transporter subunit: periplasmic-binding component of ABC superfamily TERM 240 183661 - 183649 - G 71 -9.1 -3.50853 | CGCCTGTAATGACAA TCGCC TGT GGCGA GCGTGCTAACACCTG TERM 241 184265 - 184247 - G 88 -11.7 -3.79419 | overlap 184245 CGGCGCGAGAAAAGA CAGGGCG ACCAG CGCCCTG AACAGTGACTTAGCC pfs 184973 - 184275 - | 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase dgt 185057 - 186574 + | deoxyguanosine triphosphate triphosphohydrolase TERM 242 187038 - 187052 + G 71 -9.2 -3.54029 | AACAGAAATTCATGG CGCTGG GTT CCGGCG TTATCATTGATGCCG degP 186704 - 188128 + | serine endoprotease (protease Do), membrane-associated TERM 243 188139 - 188162 + F 100 -14.6 -3.52093 | AGTAATCTCCCTCAA CCCCTTCCTG AAAA CGGGAAGGGG TTCTCCTTACAATCT TERM 244 189294 - 189310 + G 78 -8.7 -4.27441 | ATGTGCAACCGCTGG CAACGTC AAA GGCGTTG TTTATTCATCGTAAT cdaR 188306 - 189436 + | DNA-binding transcriptional activator TERM 245 189476 - 189455 - T 74 -10.1 -3.15658 | overlap 189453 189451 GATTACAAAATTACA GCCGGGTGA GACT TTACCCGGC CCACAGAATGGCATT yaeH 189876 - 189490 - | hypothetical protein TERM 246 189748 - 189762 + g 75 -7.1 -4.40003 | AAACTTCACGCTCTT GGCGA AAAAC TCGCC TTTGTCTTTCTGGAA TERM 247 190181 - 190151 - R 79 -8.9 -3.92075 | opp_overlap 190150 190147, overlap 190155 190156 ATTCTGAGCCAGAAA GCAATCGGGCAGC GTCGT GCTGCCCGTGTAC ATACTTTTAGTCGAT TERM 248 190177 - 190155 - R 78 -10.5 -3.61988 | opp_overlap 190150 190147, overlap 190151 190156 TGAGCCAGAAAGCAA TCGGGCAGC GTCGT GCTGCCCGT GTACATACTTTTAGT TERM 249 190176 - 190156 - R 86 -14 -2.76711 | opp_overlap 190150 190147, overlap 190155 190151 GAGCCAGAAAGCAAT CGGGCAGC GTCGT GCTGCCCG TGTACATACTTTTAG dapD 191012 - 190188 - | 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase TERM 250 190529 - 190548 + g 75 -5.7 -4.61231 | gap 1 CGCCGCCGATACCCA CG-CCACC GGAAA GGTGGACG TTTTTACCAATCTGC glnD 193715 - 191043 - | uridylyltransferase TERM 251 193751 - 193774 + r 79 -6.6 -4.73613 | opp_overlap 193755, overlap 193755 AAATTATTGCATTAA AAAAGCCGGC ATTC GCCGGCTTCA TTTTATTCGTCGTGC TERM 252 193770 - 193755 - R 100 -11.8 -5.15634 | opp_overlap 193751 193755 TATTGCATTAAAAAA GCCGGC ATTC GCCGGC TTCATTTTATTCGTC TERM 253 193755 - 193770 + r 93 -11.8 -3.83868 | opp_overlap 193755, overlap 193751 TATTGCATTAAAAAA GCCGGC ATTC GCCGGC TTCATTTTATTCGTC map 194571 - 193777 - | methionine aminopeptidase TERM 254 194521 - 194531 + g 74 -2.4 -5.15381 | overlap 194510 GGCAGCCAGTCGGCC AGCG ACG CGCA TTTTTTCGATATCTT TERM 255 195349 - 195338 - g 72 -7.2 -4.24413 | overlap 195335 CTGACCAAGAAAGAA GCGC TGAT GCGC ACTCGTGAGCTGGAG rpsB 194939 - 195664 + | 30S ribosomal subunit protein S2 TERM 256 195657 - 195645 - f 76 -7.7 -4.16842 | CCCAGGCGGAAGAAA GCTTC GTA GAAGC TGAGTAATAAGGCAC TERM 257 195716 - 195736 + F 100 -11.1 -4.89729 | GTACACGTTTGGTTA GGGGGCC TGCATAT GGCCCCC TTTTTCACTTTTATA TERM 258 195971 - 195955 - g 77 -3 -5.13521 | gap 1, overlap 195956 195959 AAAGCAGCGAAAAAA GCAGGCA ACGT TGC-TGC TGACGGCGTGATCAA tsf 195799 - 196650 + | protein chain elongation factor EF-Ts TERM 259 196682 - 196661 - f 93 -11.5 -4.23892 | opp_overlap 196661, overlap 196664 CTTAATTATCGAAAA GGAGCCGCC TGAG GGCGGCTTC TTTTTGTGCCCATCT TERM 260 196661 - 196682 + F 100 -13.7 -4.84761 | opp_overlap 196661 196664 CTTAATTATCGAAAA GGAGCCGCC TGAG GGCGGCTTC TTTTTGTGCCCATCT TERM 261 196679 - 196664 - f 81 -11.8 -3.12324 | opp_overlap 196661, overlap 196661 AATTATCGAAAAGGA GCCGCC TGAG GGCGGC TTCTTTTTGTGCCCA pyrH 196797 - 197522 + | uridylate kinase TERM 262 197540 - 197584 + F 77 -11.5 -2.57501 | opp_overlap 197543, overlap 197539 197537 197536 197542 CCCGTGATGGATAAA TAAGGGTAAGATTCCGCGTAA GTA TCGCGGGGGATCTTACCCGTA ATATGTTTAATCAGG TERM 263 197581 - 197543 - f 86 -11 -4.09117 | opp_overlap 197542 197540 197539 197537 197536 GTGATGGATAAATAA GGGTAAGATTCCGCGTAA GTA TCGCGGGGGATCTTACCC GTAATATGTTTAATC frr 197672 - 198229 + | ribosome recycling factor TERM 264 198229 - 198209 - f 78 -8.3 -4.14627 | opp_overlap 198209 198210 198212, overlap 198210 198212 CTGGCAGACAAAGAA GCAGAACTG ATG CAGTTCTGA TTTCTTGAACGACAA TERM 265 198209 - 198229 + F 78 -8.3 -4.15044 | opp_overlap 198209 198210 198212, overlap 198210 198212 CTGGCAGACAAAGAA GCAGAACTG ATG CAGTTCTGA TTTCTTGAACGACAA TERM 266 198228 - 198210 - f 81 -11.8 -3.08294 | opp_overlap 198209 198210 198212, overlap 198209 198212 TGGCAGACAAAGAAG CAGAACTG ATG CAGTTCTG ATTTCTTGAACGACA TERM 267 198210 - 198228 + F 81 -11.8 -3.08812 | opp_overlap 198210 198209 198212, overlap 198209 198212 TGGCAGACAAAGAAG CAGAACTG ATG CAGTTCTG ATTTCTTGAACGACA TERM 268 198242 - 198290 + F 100 -11.8 -5.27206 | gap 1, opp_overlap 198248, overlap 198243 198248 TGATTTCTTGAACGA CAAAAACGCCGCTCAGTAGATCC TTGC GGATCGGCTG-GCGGCGTTTTGC TTTTTATTCTGTCTC TERM 269 198243 - 198289 + F 100 -15.3 -3.74697 | gap 1, opp_overlap 198248, overlap 198242 198248 GATTTCTTGAACGAC AAAAACGCCGCTCAGTAGATCC TTGC GGATCGGCTG-GCGGCGTTTTG CTTTTTATTCTGTCT TERM 270 198248 - 198284 + F 100 -15.2 -4.86293 | gap 1, opp_overlap 198248, overlap 198243 198242 CTTGAACGACAAAAA CGCCGCTCAGTAGATCC TTGC GGATCGGCTG-GCGGCG TTTTGCTTTTTATTC TERM 271 198284 - 198248 - f 100 -13 -4.98255 | gap 1, opp_overlap 198243 198242 198248 CTTGAACGACAAAAA CGCCGCTCAGTAGATCC TTGC GGATCGGCTG-GCGGCG TTTTGCTTTTTATTC dxr 198321 - 199517 + | 1-deoxy-D-xylulose 5-phosphate reductoisomerase TERM 272 199622 - 199639 + F 100 -8.4 -6.02914 | TATAAGGTCAGGTAT GCCGTG GTTTTA CACGGC TTTTTTTTGTATAGG ispU 199703 - 200464 + | undecaprenyl pyrophosphate synthase cdsA 200477 - 201334 + | CDP-diglyceride synthase yaeL 201346 - 202698 + | zinc metallopeptidase TERM 273 203237 - 203226 - g 70 -5.8 -4.18018 | CGTGTTGACCTAAAA CTGG TGTT CCAG GAAGGTGTGTCAGCT TERM 274 203933 - 203965 + G 72 -10.5 -3.00704 | opp_overlap 203937, overlap 203929 203937 TGTCGATACCGATAC CCAACGTGTTCCGGG GAG CCCGGATCAGGTTGA TGTAGTTTACAAGGT TERM 275 203961 - 203937 - g 70 -9.9 -3.14026 | opp_overlap 203933 203929 203937 GATACCGATACCCAA CGTGTTCCGGG GAG CCCGGATCAGG TTGATGTAGTTTACA TERM 276 203937 - 203961 + G 72 -9.9 -3.35344 | opp_overlap 203937, overlap 203933 203929 GATACCGATACCCAA CGTGTTCCGGG GAG CCCGGATCAGG TTGATGTAGTTTACA yaeT 202728 - 205160 + | outer membrane protein assembly factor TERM 277 205259 - 205242 - f 72 -7.7 -3.96216 | overlap 205243 GGGCCACGCAAAGAA CTGCACC CTCC GGTGCAA ATGGGATGGTAAGGA TERM 278 205744 - 205716 - g 80 -11.8 -3.28712 | overlap 205701 205732 TGCCGTTGCTTACAA CAGCAGCGATGT AAAAG ACATCACTGCCG ACGTACTGAAACAGG hlpA 205282 - 205767 + | periplasmic chaperone TERM 279 205849 - 205824 - g 82 -13.3 -2.97245 | opp_overlap 205822, overlap 205819 GGATGCAGAACTACA CGGTGATGGCG ATAT CGTCATCACCG GCGTTGCGTCCATGC lpxD 205771 - 206796 + | UDP-3-O-(3-hydroxymyristoyl)-glucosamine N-acyltransferase TERM 280 206823 - 206860 + F 100 -12.7 -4.07515 | overlap 206825 TTGTTCGCCAAACTT TACGGCCTGTCTCATTC TTAC GATTGCGGCAGGCCGTG TTATTATTGTCGTTT TERM 281 206825 - 206858 + F 100 -13.1 -3.60967 | overlap 206823 GTTCGCCAAACTTTA CGGCCTGTCTCATTC TTAC GATTGCGGCAGGCCG TGTTATTATTGTCGT fabZ 206901 - 207356 + | (3R)-hydroxymyristol acyl carrier protein dehydratase TERM 282 207733 - 207719 - g 70 -10 -3.22298 | opp_overlap 207715 CTTACTGATGATCAA TGCGCA CAT TGCGCA CGATTGTACGGTAGG lpxA 207360 - 208148 + | UDP-N-acetylglucosamine acetyltransferase TERM 283 208182 - 208203 + G 95 -15.9 -2.78384 | TAACGATTGCCCTGG TCGCCGGAG AAAC CTCCGGCGA TATCCTGGGGGCCGG lpxB 208148 - 209296 + | tetraacyldisaccharide-1-P synthase rnhB 209293 - 209889 + | ribonuclease HII, degrades RNA of DNA-RNA hybrids dnaE 209926 - 213408 + | DNA polymerase III alpha subunit TERM 284 213574 - 213560 - g 74 -2.8 -5.00616 | GTTTGCGTGAAAAAA GCGT AGAACTG ACGC GTAAAATCTTCGCCG accA 213421 - 214380 + | acetyl-CoA carboxylase, carboxytransferase, alpha subunit TERM 285 214400 - 214417 + F 100 -9.1 -5.24129 | opp_overlap 214400 CAAATGTTCTGAAAA GGGTCAC TTCG GTGGCCC TTTTTTATCGCCACG TERM 286 214417 - 214400 - f 70 -6.9 -4.10453 | opp_overlap 214400 CAAATGTTCTGAAAA GGGTCAC TTCG GTGGCCC TTTTTTATCGCCACG TERM 287 215474 - 215490 + G 76 -8 -4.27617 | CACTTCGATTCTGCC TGGGTG CCGTA CACCCA TTTTCATCCAATCTA ldcC 214478 - 216619 + | lysine decarboxylase 2, constitutive TERM 288 216626 - 216609 - f 74 -5.5 -4.60487 | TACGAGTCCTAAAAA TGGCAGG ATAA CTTGCCA GAGCGGCTTCCGGGC yaeR 216676 - 217065 + | putative S-C lyase TERM 289 217348 - 217327 - g 78 -8.7 -4.15543 | overlap 217330 217339 GAAACATTGTGAAAA CATCTGCCA ACAG TGGCAGGTG CCGCTGGTGGTCGAA tilS 217130 - 218428 + | tRNA(Ile)-lysidine synthetase TERM 290 218467 - 218435 - T 93 -12 -3.76952 | overlap 218455 CTTAGTTAAGTGAAA GCCGGATAAGACGC AACAA ACGTCGCATCCGGC GAAGTCAATCAGGAC rof 218736 - 218476 - | modulator of Rho-dependent transcription termination yaeP 218923 - 218723 - | hypothetical protein TERM 291 218760 - 218773 + g 84 -8.1 -4.65895 | ACCAGTAAGTTTGCC GCAGC GTAT GCTGC TTTTTCCCTGACAGC TERM 292 219384 - 219371 - g 76 -8.1 -4.258 | opp_overlap 219380 CGACGGATTAAGAAA GCCTG CACC CAGGC CGCAGAAGTGGCGCT yaeQ 219089 - 219634 + | hypothetical protein yaeJ 219631 - 220053 + | hypothetical protein nlpE 220067 - 220777 + | lipoprotein involved with copper homeostasis and adhesion TERM 293 220877 - 220908 + T 82 -10 -4.07568 | opp_overlap 220887, overlap 220878 TAGCACAATTTTGTA GGCCGGATAAGGCG TTCA CGCCGCATCCGGCA TTTTGCGCACGAGGC TERM 294 220878 - 220907 + T 87 -13.5 -3.04398 | opp_overlap 220887, overlap 220877 AGCACAATTTTGTAG GCCGGATAAGGCG TTCA CGCCGCATCCGGC ATTTTGCGCACGAGG yaeF 221757 - 220933 - | putative lipoprotein TERM 295 221800 - 221780 - R 100 -11.1 -5.10497 | opp_overlap 221780 AATCCATGTAAAAAA GGGCCCCGA AAT TCAGGACCC TTTCTGGCATCAGCC proS 223528 - 221810 - | prolyl-tRNA synthetase TERM 296 223576 - 223558 - R 80 -11 -3.42056 | AGTTGGAAGGTAGAA CAGGCTCA AGG CGAGCCTG GGACAAAAAAAGTGA yaeB 224346 - 223639 - | hypothetical protein TERM 297 224193 - 224218 + g 83 -12.6 -3.28924 | gap 1 AATGGCTGAATGCTT CCAGGCCG-CG AACGG CGTCGGCCTGG TTGTAGGGAGCAATG TERM 298 224243 - 224255 + g 70 -4.7 -4.57073 | overlap 224244 GCAATGAGATGTAGT TCGCC GTT GGCGC TTTTTACCAGACCTG rcsF 224747 - 224343 - | conserved hypothetical protein; putative outer membrane protein, signal TERM 299 224611 - 224621 + g 74 -8.2 -3.92659 | overlap 224604 224615 ATTCGGACCGGCGTG GCGC GCG GCGC TTTCGGTTTTGCAGG TERM 300 224832 - 224804 - R 76 -6 -4.56775 | gap 1, opp_overlap 224805, overlap 224807 224810 AGGCGCTTGTAAAAA TGACAAGACGGGC AAGC GCCCGTCCTGA-A TGATATTACAAATTG TERM 301 224830 - 224807 - R 95 -14.6 -3.23708 | opp_overlap 224805, overlap 224804 224810 CGCTTGTAAAAATGA CAAGACGGGC AAGC GCCCGTCCTG AATGATATTACAAAT TERM 302 224827 - 224810 - R 100 -12.7 -3.75505 | opp_overlap 224805, overlap 224807 224804 TTGTAAAAATGACAA GACGGGC AAGC GCCCGTC CTGAATGATATTACA metQ 225680 - 224865 - | DL-methionine transporter subunit ; periplasmic-binding component of ABC superfamily metI 226373 - 225720 - | DL-methionine transporter subunit ; membrane component protein of ABC superfamily metN 227397 - 226366 - | DL-methionine transporter subunit ; ATP-binding component of ABC superfamily TERM 303 226687 - 226697 + g 77 -8.2 -4.13767 | overlap 226695 CTGAATAAACTTCTG CGCC AGC GGCG TTTTCGGATGCGAGA TERM 304 227921 - 227932 + G 75 -4.4 -4.82901 | opp_overlap 227921 GACTGCCGCAAACCA CATC CGGG GATG TTTTTGTCAGCACGC gmhB 227585 - 228157 + | D,D-heptose 1,7-bisphosphate phosphatase TERM 305 228310 - 228296 - f 76 -4.2 -5.0916 | opp_overlap 228296, overlap 228297 228304 GGTTGAAGAGAAAAA TCCTGA AAT TCAGGG TTGACTCTGAAAGAG TERM 306 228342 - 228330 - f 72 -7.7 -4.00532 | CTCTGAAAGAGGAAA GCGTA ATA TACGC CACCTCGCGACAGTG TERM 307 230389 - 230352 - f 100 -6.3 -5.68438 | opp_overlap 230354 230369, overlap 230354 TGATTAAATAAAAAA TACTTCAGAGTGTACCT GCAA AGGTTCACTGCGAAGTT TTGCTCTTTAAAAAT TERM 308 230387 - 230354 - f 88 -8.9 -4.47052 | opp_overlap 230354 230369, overlap 230352 ATTAAATAAAAAATA CTTCAGAGTGTACCT GCAA AGGTTCACTGCGAAG TTTTGCTCTTTAAAA TERM 309 230354 - 230387 + F 77 -6.7 -4.49756 | opp_overlap 230354 230352, overlap 230369 ATTAAATAAAAAATA CTTCAGAGTGTACCT GCAA AGGTTCACTGCGAAG TTTTGCTCTTTAAAA TERM 310 230997 - 230985 - f 70 -6.2 -4.2354 | GAAAGGCGAAAAGAA CCCC GGCGA GGGG AGTGAAAAAGAACCT TERM 311 232298 - 232287 - f 71 -4.4 -4.7254 | ACTGTTTATTAAAAA CACA GCAC TGTG CAAACACGAAAGTGG TERM 312 233654 - 233640 - f 70 -10 -2.53908 | opp_overlap 233640, overlap 233639 AAATTTAGCAGTAAG CCGGTT ATA AACCGG TGGTTGTAAAAGAAT TERM 313 233640 - 233654 + F 71 -10 -2.82742 | opp_overlap 233640 233639 AAATTTAGCAGTAAG CCGGTT ATA AACCGG TGGTTGTAAAAGAAT TERM 314 233764 - 233783 + F 100 -10 -6.0458 | opp_overlap 233764 233763 CCACTTATTAAGAAG CCTCGAGT TAAC GCTCGAGG TTTTTTTTCGTTTGT TERM 315 234678 - 234649 - g 100 -10 -5.47159 | GCCGAAGATAAAAAA GCGATCGCCGCA CTGGAT TGCAACGACCGC CTGGTTAGCCCGGAA dkgB 233914 - 234717 + | 2,5-diketo-D-gluconate reductase B TERM 316 234728 - 234745 + T 100 -11.3 -4.70659 | ATTAAGCCTCTCTGA CAGCTCC TCCG GGAGCTG TTTTTACATGTCCGC yafC 235628 - 234714 - | putative DNA-binding transcriptional regulator TERM 317 235839 - 235820 - H 85 -11.4 -3.54771 | opp_overlap 235804 235805, overlap 235803 CCTATAACAGTAGAA CCCTCCCG AGTG CGGAAGGG TTGACGTGATAGAGG TERM 318 235935 - 235911 - g 72 -9.9 -3.28924 | opp_overlap 235910 235906 TATGTTGCCGGACAA CCTGCGGAAAG GAT CTTACCGCCGG GGTCTTTTGCGAGCA TERM 319 236534 - 236557 + G 82 -3.1 -5.18371 | overlap 236528 236529 236532 236534 CGATGATCAGCGCCG TCGGGCG TTTGGTCGCC CGCTCGA TTTTGTTTTCTACCG yafD 235869 - 236669 + | hypothetical protein TERM 320 236690 - 236715 + F 87 -8.3 -4.46212 | gap 1, opp_overlap 236674 236702, overlap 236675 236674 GTCAGGTCTGCCACA GGGCAG-ACCAA CGT TTGGCGCTGCCC TTTTATACTCAAACA yafE 236747 - 237517 + | putative S-adenosyl-L-methionine-dependent methyltransferase TERM 321 237526 - 237546 + T 82 -10.4 -4.05848 | opp_overlap 237526 AGCATAAATAAAAAA GGCACCGG GGGAA TCGGTGCC TTTCATTATCTGGTT TERM 322 237546 - 237526 - T 100 -9.7 -5.73978 | opp_overlap 237526 AGCATAAATAAAAAA GGCACCG GGGGAAT CGGTGCC TTTCATTATCTGGTT mltD 238922 - 237564 - | membrane-bound lytic murein transglycosylase D TERM 323 238263 - 238300 + g 72 -5.6 -4.45664 | gap 1, opp_overlap 238272, overlap 238272 CTGCGGCAACGGTAA CGACCAGAAGTCCGTGG ATTTC CCACGCGCTT-TGTTCG TTTTAATTGCCTTCA TERM 324 238272 - 238292 + g 70 -4.6 -4.46669 | opp_overlap 238272, overlap 238263 CGGTAACGACCAGAA GTCCGTGG ATTTC CCACGCGC TTTGTTCGTTTTAAT gloB 239749 - 238994 - | putative hydroxyacylglutathione hydrolase TERM 325 239375 - 239363 - G 77 -6.9 -4.48072 | ACACCCACCAGAAAA CAGCG TGT CGCCG CAAAATAGATAAGGT yafS 239783 - 240505 + | putative S-adenosyl-L-methionine-dependent methyltransferase rnhA 240969 - 240502 - | ribonuclease HI, degrades RNA of DNA-RNA hybrids dnaQ 241034 - 241765 + | DNA polymerase III epsilon subunit TERM 326 242004 - 242026 + F 100 -11.4 -5.22312 | opp_overlap 242003 AATGAGTTCAGAGAG CCGCAAGATT TTT AATTTTGCGG TTTTTTCATCTAAAT TERM 327 242864 - 242854 - g 76 -4 -4.96762 | GACAGATTATAAAAA TCAA AAA TTGA CTGACACGATGTCAC yafT 242303 - 243088 + | putative aminopeptidase TERM 328 243311 - 243350 + T 100 -14.6 -4.2408 | opp_overlap 243310 243307 243325, overlap 243306 TCTATAAAACAGCAG GTACGGTTAATTAAGAAT TTTT ATTCGTGATTAACCGTAC TTTGTCATTTTATCC ECS88_0232 243928 - 243428 - | Conserved hypothetical protein Aec32 (Hcp-like) ECS88_0233 245424 - 243925 - | Conserved hypothetical protein Aec31, putative ImpA-related N-termina domain TERM 329 244665 - 244688 + gr 74 -11 -2.52543 | overlap 244619 CGGGTAGGGGGGGCA TGGTTTCCGC TGTG GCGGAAGCCG TGCCTTCAGGCGCAT TERM 330 244927 - 244914 - GR 76 -8.1 -4.19735 | opp_overlap 244913 TTTCGGAAAAGGAAA CCTGC TGGC GCAGG ATATTCCCGGTGCGG ECS88_0234 248821 - 245294 - | Conserved hypothetical protein Aec30, putative macrophage toxin, IcmF-like protein TERM 331 246875 - 246900 + gr 89 -11.9 -3.57263 | gap 1 ATCATAGGGGGTCCA GCGGCTGACAGC ATC GCTGTC-GCTGC TTTGGCGCTGCGCGT TERM 332 247934 - 247948 + gr 100 -7.8 -5.26316 | AAATGTGACGCCGAG GATCGC ATC GCGGTC TTTTTTATCCAGTGA TERM 333 248504 - 248515 + gr 74 -2.2 -5.1356 | overlap 248483 248482 GCGGTGGAGTTCCAC GGTC AACG GATC TTTTTCTTCCTCCCG ECS88_0235 250349 - 248841 - | conserved hypothetical protein Aec29, contains a TPR-like_helical domain TERM 334 249337 - 249349 + gr 81 -4.7 -5.03715 | TCCAGCCAGTACGGG GCCAG CAG CAGGC TTTTTTCCACCTGCT TERM 335 249545 - 249581 + gr 74 -8 -4.0044 | gap 1, opp_overlap 249548, overlap 249548 GCTGGCGCTCACAGA GAATGGCG-GCCACCTT TAGC AGGGTGTCGCGCCATGC TTTATCGTCGTGGTT ECS88_0236 251031 - 250288 - | conserved hypothetical protein Aec28 TERM 336 250471 - 250447 - GR 83 -11.3 -3.3514 | opp_overlap 250444 250449 ATCGATACCGGATAA CCCCCGGCTGG ACT CCAGCAGGGTG TCGTTCTCGCGCACA TERM 337 250449 - 250469 + gr 82 -12.5 -2.96274 | opp_overlap 250447, overlap 250444 CGATACCGGATAACC CCCGGCTGG ACT CCAGCAGGG TGTCGTTCTCGCGCA TERM 338 250704 - 250716 + gr 71 -2.6 -4.9181 | GCAGCTCCGTGGTGT TGCC CTGGC GGCG TTTTTCCTGTTCTGT TERM 339 250890 - 250943 + gr 70 -6.8 -4.03234 | overlap 250894 GTAACGTGGCTGTCG CATCCGGCGGT-GTCGCTGTGGCG ACAGCTAC CGCCACACCGGCCACTGAC-GATG TTTCTGTGGGCGCGG ECS88_0237 253787 - 251028 - | putative ATP-dependent Clp proteinase Aec27 ATP-binding chain, with chaperone activity ECS88_0238 254561 - 253797 - | Putative membrane protein Aec26 ECS88_0239 255912 - 254566 - | conserved hypothetical protein Aec25 TERM 340 255366 - 255376 + g 74 -2.4 -5.07486 | overlap 255360 255359 TGTCCAGCACCAGCG CGCC GGT GGCA TTTTTATTGAGGATA ECS88_0240 256439 - 255915 - | conserved hypothetical protein Aec24; putative lipoprotein TERM 341 256255 - 256309 + g 72 -10.7 -3.10164 | gap 2, overlap 256258 ACCGGCGCGGCTTCG CC-ATCCG-CCGTCAGGTTGCTGTCCG GCT CGGTCAGCAGCGTGACGGTCAGCTCGG TTGACTGATCCATCA ECS88_0241 257878 - 256436 - | conserved hypothetical protein Aec23, contains FHA domain TERM 342 257570 - 257528 - GR 77 -11.2 -2.57132 | overlap 257527 GTCGTGCCGGATAAC GGTACAGGCACGCGCAGCAA TGC TTCCCGCCCGGTCCTGTACC TGCCAGTGACATTCC ECS88_0242 258782 - 257733 - | conserved hypothetical protein Aec22 TERM 343 258526 - 258514 - GR 77 -6.9 -4.56597 | opp_overlap 258514 TGGCTGCCGGAAAAA CCCAG GAA CCGGG TTTGCAGTACATACT TERM 344 258722 - 258737 + gr 100 -11.8 -4.46155 | TGCAGTTGCGCACAT CCGCCG GTAA CGGCGG TTTTGTCGCTATATC ECS88_0243 260605 - 258746 - | conserved hypothetical protein Aec21 TERM 345 259307 - 259289 - GR 71 -8.9 -3.32022 | opp_overlap 259289 GTTGGTACAGATTAA TGACGTG GTGAT CACGTCA TCGTTAAACCGTGAG TERM 346 259804 - 259793 - GR 72 -4.4 -4.70659 | GCGCAGATGGAAAAA GAAG AAGG CTTC GGGATAGCAGAAATA TERM 347 259925 - 259890 - GR 81 -9.6 -4.07568 | gap 1, opp_overlap 259894 TCCCGGTTGTCAAAA CCCGCCGCCTCCAG-CC ACA GATCCGGCAGCGGCAGG CGGTACTCTCCGGCA ECS88_0244 261018 - 260593 - | conserved hypothetical protein Aec19 TERM 348 260823 - 260807 - G 86 -12.3 -3.53091 | opp_overlap 260807 260802 ATTTCTCGTCTGAAA TCGCTGG AGG CCAGCGA TTCATCATTTAAATC TERM 349 260807 - 260823 + g 83 -12.3 -3.33483 | opp_overlap 260807, overlap 260802 ATTTCTCGTCTGAAA TCGCTGG AGG CCAGCGA TTCATCATTTAAATC ECS88_0245 262507 - 261023 - | conserved hypothetical protein Aec18 TERM 350 261661 - 261639 - G 78 -7.6 -4.29738 | CGATACTTAGCAAAA CTTTCCGCCA GGT TGGCGGCCAG TAAAAACGAGGTATT TERM 351 262378 - 262367 - G 72 -7.2 -4.1552 | opp_overlap 262373 262374 CATGGCGGCAATAAA GGCG CTCA CGCC CTGGCGGGTGATATC ECS88_0246 263084 - 262530 - | conserved hypothetical protein Aec17 TERM 352 263399 - 263387 - H 73 -6.3 -4.38273 | opp_overlap 263383, overlap 263383 263380 ATACATCATAAGAAA TTCCT TTA AGGAA TATCTTAATTGCGTG ECS88_0247 263739 - 264257 + | Conserved hypothetical protein Aec16 (Hcp-like) TERM 353 264296 - 264269 - f 89 -14.3 -3.09234 | opp_overlap 264269, overlap 264272 ATAAATCTGAGTCAA CAACATCCTGC CTCCGT GCAGGATGTTG TTTTTGTACGTGTAA TERM 354 264269 - 264296 + F 100 -14.3 -4.89852 | opp_overlap 264269 264272 ATAAATCTGAGTCAA CAACATCCTGC CTCCGT GCAGGATGTTG TTTTTGTACGTGTAA TERM 355 264293 - 264272 - f 78 -10.2 -3.68341 | opp_overlap 264269, overlap 264269 AATCTGAGTCAACAA CATCCTGC CTCCGT GCAGGATG TTGTTTTTGTACGTG TERM 356 264858 - 264879 + G 71 -10.9 -2.8733 | gap 1, opp_overlap 264858 264870, overlap 264857 264855 ATTACTGAACGAGAA CGGCGT-CAC AGA GTGGACGCCG CTGTTTTATGAGGAC TERM 357 264879 - 264858 - g 78 -10.9 -3.52919 | gap 1, opp_overlap 264858 264857 264855, overlap 264870 ATTACTGAACGAGAA CGGCGT-CAC AGA GTGGACGCCG CTGTTTTATGAGGAC ECS88_0248 264478 - 266460 + | conserved hypothetical protein Aec15, putative VgrG/E protein associated with Rhs elements ECS88_0249 266567 - 267613 + | conserved hypothetical protein Aec14 ECS88_0250 267606 - 269045 + | conserved hypothetical protein (fused Aec13 and Aec 12) ECS88_0251 269020 - 269310 + | conserved hypothetical protein Aec11 ECS88_0252 269568 - 269747 + | putative H-repeat associated protein TERM 358 269938 - 269902 - g 77 -6 -4.68424 | gap 2, opp_overlap 269927, overlap 269904 269927 CAATTGATGGAAAAA CGCTT-CGGC-ACTCTTA TGA CAAGAGTCGCCGCAAGGG AGCGATTTATGTCAT TERM 359 270152 - 270137 - g 71 -9 -3.52192 | TTTAACCGCAGAGAA GTTCGC CACA GCGAAC CGAAATCACTGGTAC ECS88_0253 269847 - 270332 + | putative transposase; similar to Aec9 TERM 360 271038 - 271064 + G 82 -3.1 -5.20154 | gap 1, opp_overlap 271052, overlap 271039 TTTAACTTGAGTGGT ACATTG-CCAAT TCAC ATTGGTCAATGA TTTTTTAAATTGTGT ECS88_0254 270561 - 271064 + | Conserved hypothetical protein Aec8; Rhs element associated TERM 361 271393 - 271407 + G 74 -3.4 -4.99861 | opp_overlap 271381 271393, overlap 271395 AACGTCAGTTATTAA CCGGCT GGG GGCCTG TTTTTATAATTGGTG ECS88_0255 271134 - 271646 + | conserved hypothetical protein Aec7 yafV 272687 - 271917 - | putative C-N hydrolase family amidase TERM 362 272400 - 272380 - G 74 -3.1 -4.91109 | overlap 272384 CGCTTATCATAAAAA TGTACCGTG CCG CCCGGCTCA ACCAGCAAAAAGCGG ivy 272841 - 273314 + | inhibitor of vertebrate C-lysozyme TERM 363 273331 - 273348 + T 100 -12.7 -3.73068 | opp_overlap 273331 TAGCCGATAAAAAAA CGGAGCC GAAA GGCTCCG TTATTCAATTACGCG TERM 364 273348 - 273331 - T 100 -12.7 -5.626 | opp_overlap 273331 TAGCCGATAAAAAAA CGGAGCC GAAA GGCTCCG TTATTCAATTACGCG fadE 275801 - 273357 - | acyl coenzyme A dehydrogenase TERM 365 275450 - 275469 + g 70 -4.2 -4.62069 | overlap 275434 CTGCGGTCAGGCGCG GCTGCGGA TAGT TATGCAGC TTTTTCCAGTCCGGC TERM 366 276278 - 276259 - g 74 -7.8 -4.11216 | gap 1, opp_overlap 276253, overlap 276260 TCGCTACCGTGAAAA CCGTCCGGG CTA CCCGG-CGA TTGCCATTTCTGACG lpcA 276041 - 276619 + | D-sedoheptulose 7-phosphate isomerase TERM 367 276630 - 276661 + F 82 -10 -4.03078 | opp_overlap 276621 276640 276641, overlap 276631 276640 276641 AGTAAGTCTGGCGTA GGCCGGATAAGGCG TTTA CGCCGCATCCGGCA TTTGTGCTCTGATGC TERM 368 276631 - 276660 + F 87 -13.5 -3.01365 | opp_overlap 276621 276640 276641, overlap 276630 276640 276641 GTAAGTCTGGCGTAG GCCGGATAAGGCG TTTA CGCCGCATCCGGC ATTTGTGCTCTGATG TERM 369 276694 - 276641 - f 81 -12.3 -2.57931 | opp_overlap 276631 276630 276640 276641 276684, overlap 276640 CGTAGGCCGGATAAG GCGTTTACGCCGCATCCGGCATTTG TGCT CTGATGCCTGATGCGACGCTGACGC GTCTTATCATGCCTA TERM 370 276641 - 276694 + F 81 -12.3 -2.56747 | opp_overlap 276641 276640, overlap 276631 276630 276640 276684 CGTAGGCCGGATAAG GCGTTTACGCCGCATCCGGCATTTG TGCT CTGATGCCTGATGCGACGCTGACGC GTCTTATCATGCCTA TERM 371 277551 - 277530 - g 74 -8.7 -3.91084 | opp_overlap 277545 TGACGGGCAATGAAA CCTGGCAAA AGAT TATGCCAGG TGAATGGCGCTTATT yafJ 276824 - 277591 + | putative glutamine amidotransferases class-II yafK 278302 - 277562 - | hypothetical protein yafL 278605 - 279363 + | putative exported hydrolase TERM 372 279363 - 279394 + F 70 -10 -2.57683 | opp_overlap 279373, overlap 279362 279389 AGAGACGATTTTGTA GGCCGGATAAGGCG TTCA CGCCGCATCCGGCG GTTGTGCGCCGGTGT TERM 373 279389 - 279406 + F 70 -9.8 -2.94099 | overlap 279363 279362 GCGTTCACGCCGCAT CCGGCG GTTGTG CGCCGG TGTCTGATGCGACGC TERM 374 279417 - 279429 + F 73 -9.1 -3.4252 | overlap 279416 GCCGGTGTCTGATGC GACGC TAC GCGTC TTATCATGCCTACAA yafM 279539 - 280036 + | hypothetical protein TERM 375 280104 - 280135 + TF 70 -10 -2.57564 | opp_overlap 280090 280089 280114, overlap 280103 280115 CCGCGCTCACCCGTA GGCCGGATAAGGCG TTCA CGCCGCATCCGGCG GTTGTGCACCGGTGC TERM 376 280204 - 280235 + TF 70 -10 -2.57564 | opp_overlap 280190 280189 280214, overlap 280203 CCGCACTCACCCGTA GGCCGGATAAGGCG TTCA CGCCGCATCCGGCG GTTGTGCACCGGTGC fhiA 282095 - 280356 - | flagellar system protein TERM 377 282697 - 282666 - gH 77 -5.8 -4.62069 | gap 1, opp_overlap 282667 282668, overlap 282674 GCTGGATGCCAAAAA TCCGCAAAGCGCGGG CAA CCGGCGCATTG-AGA TTATGGTGCTGACCA TERM 378 282690 - 282674 - gH 75 -9.3 -3.68853 | opp_overlap 282668 282667, overlap 282666 CCAAAAATCCGCAAA GCGCGGG CAA CCGGCGC ATTGAGATTATGGTG mbhA 281935 - 282825 + | flagellar system protein dinB 282896 - 283951 + | DNA polymerase IV TERM 379 284193 - 284182 - g 76 -3.6 -4.9934 | ACAAGAGGAGAAAAA GCCC ATAA AGGC GCGCTTCCGTCCGAG yafN 284003 - 284296 + | putative antitoxin of the YafO-YafN toxin-antitoxin system yafO 284299 - 284697 + | putative toxin of the YafO-YafN toxin-antitoxin system yafP 284707 - 285159 + | putative acyltransferase with acyl-CoA N-acyltransferase domain TERM 380 286236 - 286211 - g 95 -6.7 -5.26875 | TTGCGAACGAAAAAA CGCTCCACTCG CTGG CGCATGGGGCG GGGCGTAAATGGGGG ECS88_0270 285337 - 286488 + | hypothetical protein prfH 286599 - 287099 + | putative peptide chain release factor TERM 381 287143 - 287112 - T 100 -17.3 -2.8785 | overlap 287104 287131 TAATGAAGGATGATA CTGCCGGAAGGCG ATTAAA CGCCATCCGGCAG CAAATCAAATAATTA pepD 288613 - 287156 - | aminoacyl-histidine dipeptidase (peptidase D) TERM 382 287275 - 287296 + g 71 -2.2 -5.00616 | opp_overlap 287275, overlap 287269 TTGGCCCGATAGACA CCATGTCC ATTTCC GGATACGG TTTTTTGAACAGGCC TERM 383 288211 - 288221 + g 72 -6.8 -4.25104 | GCACTTCCAGCGGGC CGTG AAC CACG TTTTCGTCAGCCAGA TERM 384 288594 - 288571 - G 90 -9 -4.57837 | gap 1, opp_overlap 288573 AGATTTTGGCAAAAA TATC-CCACAG CGG CTGTGGAGATA ATTGAGACAGTTCAG gpt 288874 - 289332 + | guanine-hypoxanthine phosphoribosyltransferase TERM 385 289336 - 289366 + F 83 -7.4 -4.74103 | overlap 289339 TCCGGTCGCTAATCT TTTCAACGCCTGGC ACT GCCGGGCGTTGTTC TTTTTAACTTCAGGC TERM 386 289339 - 289363 + F 100 -17.9 -4.47888 | overlap 289336 GGTCGCTAATCTTTT CAACGCCTGGC ACT GCCGGGCGTTG TTCTTTTTAACTTCA TERM 387 289949 - 289972 + G 72 -4.4 -4.70659 | overlap 289950 ATGGAGTTTACCGTA CCCGGCGGTG CGCC CATCACCGGC TTTTTGCATATGCCG frsA 289424 - 290668 + | hydrolase, binds to enzyme IIA(Glc) TERM 388 290699 - 290681 - f 75 -9 -3.61889 | opp_overlap 290673, overlap 290673 TAAAAATTTGCTAAA TTTTACCA ATT TGGTAAAA CAGTTGCATCACAAC crl 290726 - 291127 + | DNA-binding transcriptional regulator TERM 389 291198 - 291229 + T 70 -10 -2.54276 | opp_overlap 291208, overlap 291197 291196 TTCGTAGTTTTCGTA GGCCGGATAAGGCG TTCA CGCCGCATCCGGCA ATATTCATTAAAACT phoE 292292 - 291237 - | outer membrane phosphoporin protein E TERM 390 291834 - 291854 + g 76 -9 -3.79519 | gap 1 GTCGGTGTTCCGATA CGTCGCCAG ACCG CTGGCG-CG TTTGGTCATAAAGTT TERM 391 291999 - 292009 + g 79 -2.4 -5.21709 | TTTCAACCCGGCAAA AGCG AGA CGCG TTTTTTGCTGTGCAG TERM 392 292347 - 292325 - H 76 -10.6 -3.04501 | ATTAACGCGCGAATA TTCAGCGGGA GAG TCCCGTTGAA AACAGGAAAGTTTTT proB 292581 - 293684 + | gamma-glutamate kinase proA 293696 - 294949 + | gamma-glutamylphosphate reductase TERM 393 294956 - 295010 + F 72 -8.4 -3.69437 | opp_overlap 294956, overlap 295009 CGTGCGTAAATAAAA CCGGGTGATGCAAAAGTAGCCATTTG ATT CACAAGGCCATTGACGCATCGCCCGG TTAGTTTTAACCTTG TERM 394 295010 - 294956 - f 89 -8.4 -4.86731 | opp_overlap 294956 295009 CGTGCGTAAATAAAA CCGGGTGATGCAAAAGTAGCCATTTG ATT CACAAGGCCATTGACGCATCGCCCGG TTAGTTTTAACCTTG ECS88_0279 295294 - 295632 + | CP4-like integrase TERM 395 295875 - 295903 + T 100 -3.2 -6.01369 | opp_overlap 295875 TCTTTTAAATAACAA CGCCATTAAAAA CGCTT TGTTTAATGACG TTTTTTTATTGTTTC TERM 396 296494 - 296508 + T 76 -2.7 -5.31158 | opp_overlap 296483 296481, overlap 296495 AACAGACTCTCCTGA GCCGG GTATG CCGGA TTTTTGATTTTTTTG TERM 397 296712 - 296674 - T 95 -12.5 -3.60214 | opp_overlap 296684, overlap 296675 296684 296692 ACCGTAATCAGATAA TCGCAGCAAAGGGACAA AGCAA TAGTCCCTTTGCTGCAC AGCATCAGAATGAAT TERM 398 296711 - 296675 - T 100 -16 -2.75647 | opp_overlap 296684, overlap 296674 296684 296692 CCGTAATCAGATAAT CGCAGCAAAGGGACAA AGCAA TAGTCCCTTTGCTGCA CAGCATCAGAATGAA vat 300847 - 296717 - | Vacuolating autotransporter toxin TERM 399 299926 - 299915 - G 86 -5.8 -5.1675 | opp_overlap 299914 299915 TGAGGCATTAAAAAA GACG GGAG CGTC ATTATCCTCTGAATA TERM 400 300696 - 300676 - G 70 -9.7 -3.14344 | GATTGTTGCCACCAA CCGTTGATG CAC CAGCAACGG TTGGGAGTAATGCAG TERM 401 300957 - 300980 + H 100 -11.2 -4.86621 | opp_overlap 300957 300961, overlap 300961 TTAGCTATATAATTA TAAATGTGAC ATAT GTCACATTTA TTTTTGCTTAAAACT TERM 402 300980 - 300957 - H 78 -11.2 -2.89793 | opp_overlap 300957 300961, overlap 300961 TTAGCTATATAATTA TAAATGTGAC ATAT GTCACATTTA TTTTTGCTTAAAACT TERM 403 300976 - 300961 - H 72 -7.6 -4.12397 | opp_overlap 300957 300961, overlap 300957 CTATATAATTATAAA TGTGAC ATAT GTCACA TTTATTTTTGCTTAA TERM 404 300961 - 300976 + H 84 -7.6 -4.96773 | opp_overlap 300961 300957, overlap 300957 CTATATAATTATAAA TGTGAC ATAT GTCACA TTTATTTTTGCTTAA TERM 405 301150 - 301166 + H 88 -3.7 -5.49568 | overlap 301148 TGGTATATATGGATA TCGACGA TAT TTGTTGA TTTTTATTTTAAATT ECS88_0281 301440 - 301655 + | transposase InsA (ORF1) IS1 TERM 406 301706 - 301745 + F 78 -10 -3.60412 | opp_overlap 301694 301712 AGCTCTCGCCCCAGC GGATAACATCTGCGTCAG TCAG CTCACGCTGATGTTGCCC TTATCTGTGAACTTG ECS88_0282 301957 - 302133 + | transposase InsB (ORF1) IS1 (Fragment) ECS88_0283 302512 - 302742 + | hypothetical protein TERM 407 302749 - 302731 - f 100 -11.7 -5.24129 | GTTTTGCATAAAAAA GCCCACC ATTAA GGTGGGC AAAAGGAATGATTTA yagU 302957 - 303571 + | conserved hypothetical protein; putative inner membrane protein TERM 408 303590 - 303608 + T 91 -8.8 -4.91712 | opp_overlap 303590 TTTGAATGATAAAAA TGGCGCAA ATA TAGCGCCA TTTTTATAGGTTAAA TERM 409 303608 - 303590 - T 91 -8.8 -4.98255 | opp_overlap 303590 TTTGAATGATAAAAA TGGCGCAA ATA TAGCGCCA TTTTTATAGGTTAAA TERM 410 303797 - 303773 - T 79 -9.9 -3.80855 | TCCCTGAAAAACGAA GCCCCGCTATT ACA ACTGGCGGGGC AATGCAATTAATTAT yagV 305166 - 304456 - | hypothetical protein TERM 411 304767 - 304782 + gT 73 -6 -4.42788 | overlap 304766 CCGTGCTGACCTCAC CGCCGC TTGG GCTGCG TTTTGTCAGGTTACG TERM 412 305079 - 305066 - GT 72 -4.5 -4.66609 | GACGGCAGTGAAAAA GTCAG ATTG CCGAC CGAAATCGCCTGTGT yagW 306778 - 305135 - | putative surface or exported protein TERM 413 306259 - 306270 + gr 70 -5.8 -4.1711 | TCATTGTAAAGCTGC TGCC GACG GGCA TTTGTTGCAGATACT yagX 309293 - 306768 - | hypothetical protein TERM 414 307295 - 307329 + g 100 -12.1 -4.62069 | overlap 307298 TGTCGAATATCACCC CAGCGTTGCCATCGG TCCGC CCGCTGGCAGCGATG TTTTTACCCTGCCAG TERM 415 307298 - 307326 + g 78 -12.4 -2.95166 | overlap 307295 CGAATATCACCCCAG CGTTGCCATCGG TCCGC CCGCTGGCAGCG ATGTTTTTACCCTGC yagY 309987 - 309319 - | hypothetical protein TERM 416 310027 - 310010 - R 100 -12.7 -4.24342 | CCGTCCAGGAATAAA GCAGGGG GGTA CCCCTGC TGGTACATCAGAGAG ecpA 310631 - 310044 - | E. coli common pilus (ECP) TERM 417 310246 - 310276 + g 91 -7.6 -5.0538 | overlap 310247 CCGCCCAGTACGCCG TTGGCGGTATCG ATCATCA CGGTATCGCCAG TTTTTTCGACTGCCG TERM 418 310489 - 310514 + g 91 -7.5 -5.1615 | opp_overlap 310496, overlap 310491 AGGCTACCGAGTGGC GTCACAACCAG CTTA CTGGTGGTGTC TTTTTTGGCTGTTGC TERM 419 310491 - 310512 + g 78 -8.7 -4.20118 | opp_overlap 310496, overlap 310489 GCTACCGAGTGGCGT CACAACCAG CTTA CTGGTGGTG TCTTTTTTGGCTGTT ykgK 311295 - 310705 - | putative transcriptional regulator TERM 420 311323 - 311307 - R 75 -9.5 -3.56092 | opp_overlap 311307 TCACTACTTTCCAAA CCTGTAA TTT TTACAGG TACATTCAGTTTCTT TERM 421 312279 - 312247 - R 100 -13 -4.26344 | opp_overlap 312251 ACATCCCCAGGAAAA TTAATGCTGGTGTA ATAAA TACACCAACATTAA TCCGGTCTGATTATT ykgM 312734 - 312471 - | putative ribosomal protein TERM 422 313246 - 313224 - R 77 -4.8 -5.00616 | opp_overlap 313226, overlap 313226 CCTCGCTTTAAAAAA GAGTGCACTT CGT AAGTGCCCTT ATATAAATAACGAGT TERM 423 313244 - 313226 - R 72 -7.4 -4.13561 | opp_overlap 313226, overlap 313224 TCGCTTTAAAAAAGA GTGCACTT CGT AAGTGCCC TTATATAAATAACGA TERM 424 313262 - 313273 + r 77 -4.4 -5.08169 | ATATAAATAACGAGT TTGG TCAA CCAA TTTTTTGACATGTAT ECS88_0294 314816 - 313674 - | putative NADH-dependent flavin oxidoreductase TERM 425 314741 - 314764 + g 82 -2.4 -5.36441 | opp_overlap 314747, overlap 314745 314747 TTGTCATAGGAGCCA TAACGATACG ATTA CGTAGCTTTA TTTTTTCTGTCAGCA TERM 426 314745 - 314760 + g 77 -3.2 -5.16969 | opp_overlap 314747, overlap 314741 314747 CATAGGAGCCATAAC GATACG ATTA CGTAGC TTTATTTTTTCTGTC TERM 427 314981 - 314954 - R 82 -9.3 -4.20981 | gap 1, opp_overlap 314953 TCAATAAAGGATAAA TGTCAGGGAGAT AATGA ATCTCCCTG-CA AGGTTATTACAAATG ECS88_0295 315908 - 314988 - | hypothetical protein TERM 428 316680 - 316694 + G 70 -6.4 -4.20712 | AAAAGTAGCGGTGCA CTCTCA GCA TGGGAG TTTTCGAATGTTGTG ECS88_0296 316002 - 316991 + | putative LysR-like transcriptional regulator ECS88_0297 317116 - 318084 + | putative transcriptional regulator, lysR family TERM 429 318085 - 318106 + T 75 -8.7 -3.76373 | opp_overlap 318085 CGCTACACCGAATAA CGGGTCC TTTATCTT GGACCCG TTTGGGTATTAGCGG TERM 430 318106 - 318085 - T 72 -8.7 -3.70773 | opp_overlap 318085 CGCTACACCGAATAA CGGGTCC TTTATCTT GGACCCG TTTGGGTATTAGCGG ECS88_0298 319104 - 318115 - | putative aldo-keto reductase TERM 431 318352 - 318375 + g 80 -5.2 -4.90013 | overlap 318354 CCCTTTCTCCGCAGC CAGTTCACCT AACA AGGTGACCAG TTTTTCATTGGCTTC ECS88_0299 319982 - 319131 - | putative aldo-keto reductase TERM 432 319804 - 319825 + g 70 -6.5 -4.23781 | GCGATACCGCTTTGT TTCAGGGCG TTCC CGACCTGGA TTTCATTTTGATAAG TERM 433 320459 - 320436 - H 77 -11.2 -2.73529 | overlap 320432 320433 TCTTACATAAAGGTA TTTCCTTTTC TGTG GAAAAGGAAA CCGGGAAATCCCCGG TERM 434 320460 - 320474 + H 89 -8.5 -4.82901 | opp_overlap 320432 320433 320460 CTGTGGAAAAGGAAA CCGGG AAATC CCCGG TTTTTCTGACAAGCA TERM 435 320474 - 320460 - H 82 -9.2 -4.19735 | opp_overlap 320460, overlap 320432 320433 CTGTGGAAAAGGAAA CCGGGA AAT CCCCGG TTTTTCTGACAAGCA TERM 436 321253 - 321217 - g 80 -5.7 -5.00616 | opp_overlap 321245 321246 TCTGGCTGGAAAAAA TCGCCGGATGTTGAGGA TTA TCAGGAACGCCCGGCGA ATGGCTGGGATATTC TERM 437 324463 - 324453 - g 71 -2.4 -4.91109 | CGCGGATGATAAAAA CGCG GTG CTCG CTGCATCTCCAGAGC ECS88_0300 320548 - 324798 + | putative adhesin TERM 438 324848 - 324820 - T 74 -7.5 -4.22554 | opp_overlap 324820 324823 CGATGTAATAAATAA TAATGGCGTTG ACATGCG CAGCGCCATTA TTTACTGAATACCTA TERM 439 324820 - 324848 + T 79 -9.7 -3.767 | opp_overlap 324820, overlap 324823 CGATGTAATAAATAA TAATGGCGTTG ACATGCG CAGCGCCATTA TTTACTGAATACCTA TERM 440 324823 - 324845 + T 70 -7 -4.015 | opp_overlap 324820, overlap 324820 TGTAATAAATAATAA TGGCGTTG ACATGCG CAGCGCCA TTATTTACTGAATAC TERM 441 324855 - 324902 + T 71 -8.6 -3.55219 | gap 2, opp_overlap 324860, overlap 324857 GCGCCATTATTTACT GA-ATACC-TACCCTGGCACCG ATTAGA CGGTGGCAGGGTAGGGTAAATC TTATGTGATGGAGTT TERM 442 324857 - 324899 + T 77 -11.4 -2.6062 | gap 1, opp_overlap 324860, overlap 324855 GCCATTATTTACTGA ATACC-TACCCTGGCACCG ATTAGA CGGTGGCAGGGTAGGGTAA ATCTTATGTGATGGA TERM 443 324895 - 324860 - T 100 -19.1 -3.10056 | opp_overlap 324857 324855 ATTATTTACTGAATA CCTACCCTGGCACCG ATTAGA CGGTGGCAGGGTAGG GTAAATCTTATGTGA ykgA 325780 - 324923 - | Putatve transcriptional regulator ykgA ECS88_0302 326013 - 326897 + | putative reductase ykgB 327650 - 327057 - | conserved hypothetical protein; putative inner membrane protein ykgI 327898 - 327662 - | hypothetical protein TERM 444 327967 - 327998 + r 100 -12.4 -4.45261 | overlap 327965 327970 TAAGATTCTTTTCTC TGAGACGCCAGAAT ATTT GTTCTGGCGTCTGA TTTTGAGTTTATTTG TERM 445 327970 - 327995 + r 95 -14.1 -3.16695 | overlap 327965 327967 GATTCTTTTCTCTGA GACGCCAGAAT ATTT GTTCTGGCGTC TGATTTTGAGTTTAT ykgC 329332 - 328007 - | putative pyridine nucleotide-disulfide oxidoreductase TERM 446 328767 - 328757 - G 81 -6.8 -4.65895 | TTCCCGAGGCAAAAA CAGC GAA GCTG CCTCTAAAATGGTTA TERM 447 329562 - 329542 - H 76 -2.6 -5.26875 | gap 1, overlap 329546 TTTGTAATCAAAAAA CCAC-TCAG GAGT CTGATATGG ATGCTCTTAGCCGTT ykgD 329559 - 330413 + | putative AraC-type DNA-binding transcriptional regulator ykgE 330940 - 331659 + | putative hydroxyacid oxidoreductase (Fe-S centre) ykgF 331670 - 333097 + | putative oxidoreductase subunit with NAD(P)-binding domain and ferridoxin-like domain ykgG 333090 - 333785 + | hypothetical protein ECS88_0310 334056 - 333859 - | hypothetical protein TERM 448 333899 - 333925 + gT 83 -11 -3.66178 | opp_overlap 333899 CAGCTCTTCTGTAAA TATCCTGACATT AAT AATGCCAGGATA TTTACAGTTAAAAAG TERM 449 333925 - 333899 - GT 100 -13.2 -3.53224 | opp_overlap 333899 CAGCTCTTCTGTAAA TATCCTGACATT AAT AATGCCAGGATA TTTACAGTTAAAAAG TERM 450 333957 - 333942 - GT 72 -7.6 -3.96999 | TTACAGTTAAAAAGA CAGGAA TCCA TTCCTG AAGACGGGCTCCCTT TERM 451 334047 - 334062 + gT 85 -3.3 -5.40072 | TGCCCAGAGTTTTGT TGGTA TTCATC TACCA TTTTTTTGACAAGGC ykgH 334696 - 334028 - | conserved hypothetical protein; putative inner membrane protein ECS88_0312 337210 - 334880 - | Putative adhesin; putative outer membrane autotransporter barrel ECS88_0313 337980 - 337219 - | hypothetical protein TERM 452 337269 - 337291 + g 70 -7.1 -4.09243 | gap 1, opp_overlap 337274 CTGCATTTACCACCA CGG-AATACC TGTT GGTATTTCCG TTTTCACGCAATGTC TERM 453 337759 - 337747 - G 87 -4.7 -5.24129 | CGGTGGCAGAAAAAA GGGCG CGA CGCAC AACACCACCACGAAT TERM 454 337801 - 337777 - G 73 -11.5 -2.80492 | opp_overlap 337777 337776 CACCACCACGAATGA GTGATCCCGAT AAA ATCGGAACCAC ATTTCAGCGCATTCG ECS88_0315 338928 - 338134 - | putative transcription regulator; LuxR-type HTH domain TERM 455 338953 - 338989 + r 100 -18.3 -3.74872 | opp_overlap 338958, overlap 338958 TCCACGCCATTGCTA CAAAACCTGACATTTTG ATT CAAAATGTCAGGTTTGG TTTAATAGCCTGAAT TERM 456 338958 - 338984 + r 100 -16.8 -4.10552 | opp_overlap 338958, overlap 338953 GCCATTGCTACAAAA CCTGACATTTTG ATT CAAAATGTCAGG TTTGGTTTAATAGCC TERM 457 338984 - 338958 - R 100 -16.8 -4.38712 | opp_overlap 338953 338958 GCCATTGCTACAAAA CCTGACATTTTG ATT CAAAATGTCAGG TTTGGTTTAATAGCC ECS88_0317 339860 - 339258 - | Putative DNA recombinase similar to Type 1 fimbriae Regulatory proteins TERM 458 340329 - 340340 + H 76 -3 -5.2197 | opp_overlap 340329 ATAAATTAAAAATAT TCAT TTAA ATGA TTTTTACTTTTTGTA ECS88_0318 340586 - 340867 + | hypothetical protein betA 342580 - 340892 - | choline dehydrogenase, a flavoprotein TERM 459 342557 - 342535 - G 76 -11.2 -3.35996 | overlap 342536 GACGGGTAGCGAGAA CGTTGCCGGC TGA GCCGGCACCA ATAATGATGTAGTCA TERM 460 342556 - 342536 - G 76 -12.5 -2.61383 | overlap 342535 ACGGGTAGCGAGAAC GTTGCCGGC TGA GCCGGCACC AATAATGATGTAGTC betB 344066 - 342594 - | betaine aldehyde dehydrogenase, NAD-dependent betI 344667 - 344080 - | DNA-binding transcriptional repressor TERM 461 344466 - 344454 - G 72 -6.9 -4.21275 | GTAATCGATTCAAAA CCGCG TCA CGCAG CTGACTGGTGATATC TERM 462 344487 - 344506 + g 81 -5.8 -4.87665 | gap 1 TGGTGATATCGCGCA TGGT-TGCT TCC AGCAGACCA TTTTTGTCCCTGAAA TERM 463 344563 - 344547 - G 78 -9.3 -3.86346 | opp_overlap 344536 344562 TGATCCCCGTAGAAA CGCCTGC ACG GCGGGCG ATCTGCGCGATCGTT TERM 464 344873 - 344828 - g 72 -10.6 -3.11922 | gap 1, opp_overlap 344828 344833, overlap 344826 344833 CAGCAGGGAAAAGGA CAAAATCAATCCGGTGGT-GT TTTAC ACTTCCGCCGGACTGATTTTG TTGTTTTCCCTGACA TERM 465 344828 - 344873 + G 91 -10.6 -4.21812 | gap 1, opp_overlap 344826 344828 344833, overlap 344833 CAGCAGGGAAAAGGA CAAAATCAATCCGGTGGT-GT TTTAC ACTTCCGCCGGACTGATTTTG TTGTTTTCCCTGACA TERM 466 344833 - 344868 + G 81 -4.7 -5.093 | gap 1, opp_overlap 344828 344826 344833, overlap 344828 GGGAAAAGGACAAAA TCAATCCGGTGGT-GT TTTAC ACTTCCGCCGGACTGA TTTTGTTGTTTTCCC TERM 467 344868 - 344833 - g 72 -4.7 -4.67635 | gap 1, opp_overlap 344833 344828, overlap 344828 344826 GGGAAAAGGACAAAA TCAATCCGGTGGT-GT TTTAC ACTTCCGCCGGACTGA TTTTGTTGTTTTCCC TERM 468 345845 - 345857 + G 71 -9.1 -3.56576 | TACCATTCGCCAGTT CGTGC TGG GCACG TTGATTATTCCGTTT TERM 469 346524 - 346514 - g 74 -2.4 -5.08824 | overlap 346515 CGTGGAGCTAAAAAA CCTG CCG CCGG AAGAGGGACAACAGT betT 344796 - 346829 + | choline transporter of high affinity TERM 470 346871 - 346846 - T 100 -13.3 -4.4009 | opp_overlap 346846 TGTTATTGCATAAAA CCGCGCCATGT CTGC ATATGGCGCGG TTTCTCTTACCTCTT TERM 471 346846 - 346871 + T 100 -15.5 -4.23281 | opp_overlap 346846 TGTTATTGCATAAAA CCGCGCCATGT CTGC ATATGGCGCGG TTTCTCTTACCTCTT ECS88_0323 347386 - 347198 - | hypothetical protein TERM 472 348133 - 348180 + G 76 -7.6 -4.29106 | opp_overlap 348158 348159, overlap 348137 348164 ACGGGCTGTGAAGTG CTTGTCCGCTGGGAACATCCAC AAAC GGGAATGATCCCACCGGATCAG TTTATTCCTCTGGCG yahA 347707 - 348795 + | cyclic di-GMP phosphodiesterase yahB 349769 - 348837 - | putative DNA-binding transcriptional regulator TERM 473 348883 - 348899 + g 79 -3.7 -5.15634 | overlap 348886 ATCCCCGTTAATATG CCATTTG GCG CAAATTG TTTTTTAATCCACTG TERM 474 348886 - 348896 + g 70 -4 -4.67552 | overlap 348883 CCCGTTAATATGCCA TTTG GCG CAAA TTGTTTTTTAATCCA yahC 350358 - 349861 - | conserved hypothetical protein; putative inner membrane protein yahD 350616 - 351221 + | putative protein with ankyrin domain yahE 351261 - 352124 + | hypothetical protein TERM 475 352209 - 352195 - g 90 -10 -4.41616 | ACGCGTGCAAATAAA CTCGAC GGC GTCGAG CAGGCATTTGTGGCG TERM 476 352418 - 352387 - g 86 -10.8 -3.92324 | opp_overlap 352405 CTGTTCAACACCAAA GCGCAAAGCGGCTC GCAC GAGGCGCGTTACGC CACTATTGCCAGCGC yahF 352114 - 353661 + | putative enzyme with acyl-CoA domain TERM 477 353856 - 353845 - g 72 -5.8 -4.3739 | overlap 353846 CACTGGCGGACAAAA TCGC CTCC GCGA ATCAGCAGGCGCTGG yahG 353661 - 355079 + | hypothetical protein yahI 355233 - 356183 + | putative carbamate kinase TERM 478 356431 - 356399 - g 72 -6.2 -4.30576 | gap 1 TTTTGACTACGAAAA TGGCGTGGCGGTGCA GACC CGCACGGCG-CGCCA GACTGTGGAAATTCA TERM 479 356793 - 356777 - g 72 -5.1 -4.56597 | overlap 356778 TTCCGGCCTGAAAAA TCTGCAA AAT TTGCAGG CGGTGCTGGCGCGAC yahJ 356193 - 357575 + | putative deaminase/amidohydrolase with metallo-dependent hydrolase domain TERM 480 357636 - 357620 - f 72 -9.4 -3.19889 | opp_overlap 357615, overlap 357613 CAGTAAGAGATTTAA GCCCCA GGGAG TGGGGC ATCAATGGTTTGCTA ECS88_0333 357843 - 358283 + | hypothetical protein ECS88_0334 358534 - 359520 + | putative periplasmic binding protein, substrate ribose (sugar-binding protein), ABC-type transport system TERM 481 359530 - 359547 + F 100 -12.7 -3.9461 | TATTAATCCATTTCT TCGGGGC GAAA GCCCCGA TTCTTATTGCCAGGG TERM 482 360344 - 360325 - g 95 -12.2 -4.18018 | overlap 360329 TTGTGGCAGGGAAAA TCCAGCAC CCCG GTGCTGGA GGTGCGTAATTTAAG ECS88_0335 359554 - 361053 + | Putative ATP-binding component of ABC sugar transport system ECS88_0336 361046 - 362017 + | putative permease component of sugar ABC transport system TERM 483 362682 - 362694 + GF 71 -3.3 -4.79223 | TTCCGCCTTGCTTTG TGCGG TAG CGGCA TTTTTGATGATGTCG ECS88_0337 361984 - 362970 + | putative permease component of sugar ABC transport system TERM 484 363712 - 363702 - g 77 -8.2 -4.14392 | CGCGAAGCGGCAAAA GCCC TGG GGGC CGATGAAGTTGTTAA yahK 363057 - 364106 + | putative oxidoreductase, Zn-dependent and NAD(P)-binding TERM 485 364180 - 364143 - f 95 -12.9 -3.37493 | opp_overlap 364143, overlap 364144 GGTTTAACATATTAA CTTCGCTCCACTTAACT TTTT AGTTAAGGAGAGCGAAA TAATATCAAAGTAGT TERM 486 364179 - 364144 - f 87 -14.2 -2.62175 | opp_overlap 364143, overlap 364143 GTTTAACATATTAAC TTCGCTCCACTTAACT TTTT AGTTAAGGAGAGCGAA ATAATATCAAAGTAG TERM 487 364863 - 364842 - g 95 -7.2 -5.31059 | AGAGCAATGAAAAAA GCCCACAC AGGGGA GAGTGGGC TGAAATGGGAAGCTA yahM 364728 - 364973 + | hypothetical protein yahN 365661 - 364990 - | neutral amino-acid efflux system TERM 488 365485 - 365467 - G 72 -4.4 -4.65747 | overlap 365468 CAACCCGGAATAAAA CGCATCGC CCA GCGCCACG CCCAGTCCGGTCAGC yahO 365808 - 366083 + | hypothetical protein prpR 367770 - 366184 - | DNA-binding transcriptional activator TERM 489 366951 - 366982 + g 79 -12.4 -3.04461 | gap 1 CAAACGGATGCGACT TTTTGCCCTGTCGCG CAT CGTGGC-GGGCAAAA TATTCCCGATGAATC TERM 490 368337 - 368327 - g 72 -8.2 -3.80862 | AAATCGATGATTAAA GCCG GTG CGGC AGGATTGCATATTGA TERM 491 368805 - 368793 - g 70 -5.5 -4.43501 | AAGGCACGCAGAAAA GCGTC ATC GACAC CATGCAGACCCGCAA prpB 368009 - 368899 + | 2-methylisocitrate lyase prpC 368944 - 370113 + | 2-methylcitrate synthase TERM 492 370349 - 370324 - g 79 -4.5 -5.02074 | overlap 370308 370325 CCAGCCTGTAAAAAA CTGCTGGGGCC AATT GTCCCCGGCAC CGTCGTCCCCAACGG prpD 370147 - 371598 + | 2-methylcitrate dehydratase TERM 493 372208 - 372189 - g 76 -12.8 -2.60079 | opp_overlap 372188 372187 372187, overlap 372185 372186 CGATGCGATAAGTCA GGCGCAGC ATCA GCCGCGCC ACGTTTTACTGGTGG prpE 371638 - 373524 + | propionyl-CoA synthetase TERM 494 373555 - 373524 - f 74 -10.8 -2.75992 | opp_overlap 373535 373536, overlap 373521 373534 373535 GGCGATGGAAGAGTA GGTCGGATAAGGCG CTCG CGCCGCATCCGACA CCGTGCGCAGATGCC TERM 495 373590 - 373534 - f 76 -10.2 -3.30441 | gap 2, opp_overlap 373535 373536 373577, overlap 373524 373521 373535 GAGTAGGTCGGATAA GGCGC-TC-GCGCCGCATCCGACACC GTGCGCA GATGCCTGATGCGACGCTGACGCGTC TTATCATGCCTACAG TERM 496 373587 - 373535 - f 79 -11.9 -2.5805 | opp_overlap 373535 373536 373577, overlap 373524 373521 373534 AGTAGGTCGGATAAG GCGCTCGCGCCGCATCCGACACC GTGCGCA GATGCCTGATGCGACGCTGACGC GTCTTATCATGCCTA TERM 497 373684 - 373628 - f 76 -10.2 -3.30124 | gap 2, opp_overlap 373629 373630 373671, overlap 373629 CCGTAGGTCGGATAA GGCGC-TC-GCGCCGCATCCGACACC ATGCGCA GATGCCTGATGCGACGCTGACGCGTC TTATCATGCCTACCC TERM 498 373681 - 373629 - f 79 -11.9 -2.57931 | opp_overlap 373629 373630 373671, overlap 373628 CGTAGGTCGGATAAG GCGCTCGCGCCGCATCCGACACC ATGCGCA GATGCCTGATGCGACGCTGACGC GTCTTATCATGCCTA codB 373849 - 375108 + | cytosine transporter TERM 499 375336 - 375317 - g 72 -10 -3.30635 | CAAACCGCCGGACAA CCGAACTG GAAT CAGTCCGG CACGCTGTTTGAAGG TERM 500 375555 - 375575 + G 74 -6.2 -4.50976 | gap 1, opp_overlap 375572, overlap 375558 TTGATCTGCAAATCG TCGCCTTCC CGCA GGAAGG-GA TTTTGTCGTATCCCA codA 375098 - 376381 + | cytosine deaminase lacA 377113 - 376502 - | thiogalactoside acetyltransferase TERM 501 377139 - 377170 + r 71 -8.6 -3.45366 | opp_overlap 377149, overlap 377140 CCGCCCTGATATGTT GGTCGGATAAGGCG CTCG CGCCGCATCCGACA TTGATTGCTTAAGCG TERM 502 377140 - 377169 + r 79 -12.1 -2.66899 | opp_overlap 377149, overlap 377139 CGCCCTGATATGTTG GTCGGATAAGGCG CTCG CGCCGCATCCGAC ATTGATTGCTTAAGC lacY 378432 - 377179 - | lactose/galactose transporter TERM 503 378455 - 378477 + r 82 -9 -4.24569 | opp_overlap 378454 378456, overlap 378451 378456 TTCCTTACGCGAAAT ACGGGCAGAC ATG GCCTGCCCGG TTATTATTATTTTTG TERM 504 378456 - 378476 + r 83 -12.5 -3.12301 | opp_overlap 378454 378456, overlap 378455 378451 TCCTTACGCGAAATA CGGGCAGAC ATG GCCTGCCCG GTTATTATTATTTTT TERM 505 378476 - 378456 - R 100 -14.7 -3.38046 | opp_overlap 378456 378455 378451, overlap 378454 TCCTTACGCGAAATA CGGGCAGAC ATG GCCTGCCCG GTTATTATTATTTTT lacZ 381558 - 378484 - | beta-D-galactosidase TERM 506 381000 - 381010 + g 81 -8.2 -4.38154 | AGCGCAGCACCATCA CCGC GAG GCGG TTTTCTCCGGCGTGT TERM 507 381384 - 381326 - G 85 -13.2 -3.13403 | gap 1, opp_overlap 381312 TCGGCGTCAGGAAGA TCGCACTCCAGCCAGCTTTCCGGCACC GCTTCT GGTGCCGGAAACCAGGC-AAAGCGCCA TTCGCCATTCAGGCT lacI 382763 - 381681 - | DNA-binding transcriptional repressor TERM 508 383074 - 383055 - g 81 -4.9 -5.06103 | overlap 383044 383056 AGAACGGCGAAAAAA TCGCGCG TTCAGG CGCGTGA AGCTCGGGCTGCGGT yaiL 382965 - 383504 + | nucleoprotein/polynucleotide-associated enzyme TERM 509 383521 - 383565 + T 71 -8.6 -3.53224 | gap 1 CATAGATAAGCCGTG CAGTGATGCCTGATGCGACGC TTAC GCGTCTTATCAGGCCT-ACGG TTTACGGGCGAAGTG TERM 510 383600 - 383641 + T 80 -8.5 -4.20712 | opp_overlap 383593 383594, overlap 383601 383635 383637 CCGGATAAGGCGTTC ACGCCGCATCCGGCAGCCG TGCG CAGATGCCTGATGCGACGC TTTTCGCGTCTTATC TERM 511 383601 - 383640 + T 81 -12 -3.11704 | opp_overlap 383593 383594, overlap 383600 383635 383637 CGGATAAGGCGTTCA CGCCGCATCCGGCAGCCG TGCG CAGATGCCTGATGCGACG CTTTTCGCGTCTTAT TERM 512 383648 - 383697 + T 85 -11.5 -3.53811 | opp_overlap 383680 383681 383684 383694, overlap 383637 ATGCGACGCTTTTCG CGTCTTATCAGGCCTACGGCTTA CGGG TGAAATGTAGGCCGGATAAGGCG TTTACGCCGCATCCG TERM 513 383715 - 383684 - T 79 -12.2 -2.64472 | opp_overlap 383648, overlap 383681 383680 383694 TACGGGTGAAATGTA GGCCGGATAAGGCG TTTA CGCCGCATCCGGCA GTCGTGCACTATTAT frmB 384563 - 383730 - | S-formylglutathione hydrolase TERM 514 384521 - 384545 + g 70 -3.5 -4.68424 | overlap 384523 AATGCCGATACACAT TTTGCCAGC CGCCAAA GCTGGCATG TTTTTCAATGAGTTC TERM 515 384523 - 384543 + g 74 -8.3 -3.95214 | overlap 384521 TGCCGATACACATTT TGCCAGC CGCCAAA GCTGGCA TGTTTTTCAATGAGT frmA 385765 - 384656 - | alcohol dehydrogenase class III/glutathione-dependent formaldehyde dehydrogenase TERM 516 385426 - 385454 + g 93 -13.1 -3.66908 | overlap 385422 GCATCAAGCCTTTGC CCTGCGTTTCGCG AAC CGCGACACACAGG TTGGTTTTGCCAGAA frmR 386075 - 385800 - | regulator protein that represses frmRAB operon TERM 517 386151 - 386101 - R 100 -22.4 -3.06302 | gap 1, opp_overlap 386105 386110, overlap 386103 386105 ATCATCTGCACGCAA TATACTATAGGGGGGTATGCTAT ATGTCA AT-GCATACCCCCCTATAGTATA TAACACTGGAGAATA TERM 518 386149 - 386103 - R 100 -20.6 -3.08996 | gap 1, opp_overlap 386105 386110, overlap 386101 386105 CATCTGCACGCAATA TACTATAGGGGGGTATGCTAT ATGTCA AT-GCATACCCCCCTATAGTA TATAACACTGGAGAA TERM 519 386147 - 386105 - R 100 -18.8 -3.10344 | gap 1, opp_overlap 386105 386110, overlap 386103 386101 TCTGCACGCAATATA CTATAGGGGGGTATGCTAT ATGTCA AT-GCATACCCCCCTATAG TATATAACACTGGAG TERM 520 386105 - 386147 + r 100 -18.8 -2.88544 | gap 1, opp_overlap 386103 386101 386105, overlap 386110 TCTGCACGCAATATA CTATAGGGGGGTATGCTAT ATGTCA AT-GCATACCCCCCTATAG TATATAACACTGGAG TERM 521 386110 - 386142 + r 86 -12.9 -2.88999 | gap 1, opp_overlap 386105 386103 386101, overlap 386105 ACGCAATATACTATA GGGGGGTATGCTAT ATGTCA AT-GCATACCCCCC TATAGTATATAACAC yaiO 387037 - 386264 - | hypothetical protein yaiX 387749 - 387039 - | putative transferase yaiP 388794 - 387598 - | putative membrane-associated glycosyltransferase TERM 522 388059 - 388046 - GR 72 -9.5 -3.2375 | TAGCCCACAATCCAA CGCCG CCAG CGGCG CCACTCCTCACGCGG TERM 523 388469 - 388458 - GR 100 -5.8 -5.48825 | CATCACTTAAAAAAA CCTG ATCG CAGG TGGCGTAATTGAGGC TERM 524 388766 - 388747 - GR 76 -8.6 -3.93583 | TAACGTACTCAGAAA CCATAGCA ATAT TGCTACGG CCATACATATAAAGA yaiS 389475 - 388804 - | hypothetical protein TERM 525 389414 - 389429 + g 71 -3.2 -4.86731 | opp_overlap 389423 GGATGCGCGCCAATG GCAAGG ATAC CCTTTC TTTTATTTGCCGAAG TERM 526 390194 - 390174 - g 84 -11.1 -3.72576 | CCGTGGCGTATCAAA CCTCCGCCG AAC CGGCGAAAG TGGCTCAGGCCGACA tauA 390083 - 391045 + | taurine transporter subunit ; periplasmic-binding component of ABC superfamily TERM 527 391463 - 391504 + G 84 -10.8 -3.71848 | GGTGGTCAACGTCAG CGGGTGGGGATTGCCCGC GCGTTG GCGGCAAATCCCCAGCTG TTATTACTCGACGAA tauB 391058 - 391825 + | taurine transporter subunit ; ATP-binding component of ABC superfamily TERM 528 392550 - 392580 + G 88 -8.2 -4.65933 | GACTGACGTGGTGCT GGCGGGGATCGCGG TGA TTGCGATTATCGCC TTTCTTTTAGAACTG tauC 391822 - 392649 + | taurine transporter subunit ; membrane component of ABC superfamily TERM 529 392821 - 392833 + G 81 -9.1 -4.08767 | CGCAGCAGCAACGCG CGCTG GCC CAGCG TTTTGGCGAGCTGCA tauD 392646 - 393497 + | taurine dioxygenase, 2-oxoglutarate-dependent TERM 530 393527 - 393506 - T 100 -14.5 -3.60792 | GGGGTAAGGGGGAAA TGCCGGGTT GGAT AACCCGGCA TAATGATCATTAACG hemB 394511 - 393537 - | porphobilinogen synthase ECS88_0367 395037 - 398024 + | Putative flagellin-like structural protein similar to yaiT; putative exported protein TERM 531 398092 - 398063 - f 100 -18.1 -3.78409 | opp_overlap 398066, overlap 398066 GTAATTTAATCTAAA TAATGCCCGTCAA GGAT TTGACGGGCATTA CTGCAAAGGACGCGC TERM 532 398089 - 398066 - g 100 -15.4 -4.01381 | opp_overlap 398066, overlap 398063 ATTTAATCTAAATAA TGCCCGTCAA GGAT TTGACGGGCA TTACTGCAAAGGACG TERM 533 398066 - 398089 + G 100 -15.4 -3.14132 | opp_overlap 398066 398063 ATTTAATCTAAATAA TGCCCGTCAA GGAT TTGACGGGCA TTACTGCAAAGGACG TERM 534 398724 - 398688 - g 82 -11.8 -3.55866 | gap 1, opp_overlap 398700, overlap 398692 CTATATCGAAATGAA TAAAGGCAAACTGGTCG CTAT CAACC-GTTTGCCTTCA GAGTATTAATCAGGA TERM 535 398720 - 398692 - g 90 -10.4 -4.40298 | gap 1, opp_overlap 398700, overlap 398688 ATCGAAATGAATAAA GGCAAACTGGTCG CTAT CAACC-GTTTGCC TTCAGAGTATTAATC yaiV 398065 - 398733 + | hypothetical protein TERM 536 398741 - 398768 + T 79 -11.4 -3.07816 | gap 1 AGTATTAATCAGGAT GCGGGGAT-AACC AAC GGTTTATTCCCGC TTAGCTCGGTCACCA ampH 399891 - 398734 - | beta-lactamase/D-alanine carboxypeptidase TERM 537 399355 - 399369 + g 70 -4.9 -4.55128 | overlap 399346 399345 GGAGTACGCGGCCTG GCTGC CCGGC GCGGC TTTTAGTTTGGCAGT ECS88_0370 400029 - 400223 + | hypothetical protein TERM 538 401115 - 401143 + G 70 -4.4 -4.57569 | gap 1, opp_overlap 401106 TGAAGACGATGCCAC GCGCGCGACGCCG CCTA CGGTA-CGCGAGC TTTTTAGCGCCGTAC sbmA 400243 - 401463 + | transporter involved in cell envelope modification yaiW 401476 - 402570 + | putative lipoprotein yaiY 402937 - 402629 - | conserved hypothetical protein; putative inner membrane protein TERM 539 402879 - 402851 - G 77 -8.2 -4.13711 | gap 1, overlap 402854 GCAAAACAGCACAAA CAACGCATAGGCA ATAT TGCC-AGGCGTTG AAGATGCATTGCGAT yaiZ 403065 - 403409 + | hypothetical protein TERM 540 403424 - 403400 - T 84 -8.6 -4.42851 | opp_overlap 403400 TGAAGAAACTGAAAA CGCCCAATAA GAATA TTACCGGGCG TTTGAATATTACATT ddlA 404527 - 403433 - | D-alanine-D-alanine ligase A TERM 541 403632 - 403619 - G 70 -4.5 -4.56597 | CTCTGGGGTTAAAAA CACGT CTAC ACGCG CCATGCCTGCGCATC TERM 542 404233 - 404252 + g 70 -5.6 -4.431 | opp_overlap 404229, overlap 404235 GGAAAATGACATCCA CCGTCGGC AACG GCTGACCG TTTTGTGCGTCGATA yaiB 404989 - 405249 + | hypothetical protein TERM 543 405292 - 405306 + F 79 -4.2 -5.21459 | overlap 405283 405294 AAAGTTGTCACGGCC GAGACT TAT AGTCGC TTTGTTTTTATTTTT TERM 544 405593 - 405625 + G 90 -6.9 -5.04987 | GACTCGGAAATTACT GCCGCACGCAATT ATGCCGA AGGTGCGGGCGGC TTTTTTAAAGGTATT TERM 545 405704 - 405693 - g 100 -7.2 -5.7946 | CGCTGAATAAAAAAA CCGG CAAA CCGG ACTACGTCACCGACT phoA 405350 - 406765 + | bacterial alkaline phosphatase TERM 546 406802 - 406768 - f 80 -6.3 -4.86731 | gap 1, opp_overlap 406770 406771 406801, overlap 406763 406769 406770 GGGGCTGAAATAAAA CCGCGCCCGGCAGTGA ATTT TCGCTGCCGGGTG-GT TTTTTTGCTGTTAGC TERM 547 406801 - 406769 - f 75 -9.8 -3.51557 | gap 1, opp_overlap 406770 406771, overlap 406768 406763 406770 GGGCTGAAATAAAAC CGCGCCCGGCAGTGA ATTT TCGCTGCCGGGTG-G TTTTTTTGCTGTTAG TERM 548 406801 - 406770 - f 71 -10 -2.70452 | opp_overlap 406770 406771, overlap 406769 406768 406763 GGCTGAAATAAAACC GCGCCCGGCAGTGA ATTT TCGCTGCCGGGTGG TTTTTTTGCTGTTAG TERM 549 406770 - 406801 + F 100 -14.4 -5.63374 | opp_overlap 406769 406770 406768 406763, overlap 406771 GGCTGAAATAAAACC GCGCCCGGCAGTGA ATTT TCGCTGCCGGGTGG TTTTTTTGCTGTTAG TERM 550 406771 - 406800 + F 100 -17.9 -3.96398 | opp_overlap 406769 406770 406768 406763, overlap 406770 GCTGAAATAAAACCG CGCCCGGCAGTGA ATTT TCGCTGCCGGGTG GTTTTTTTGCTGTTA psiF 406884 - 407204 + | phosphate starvation-inducible protein TERM 551 407218 - 407251 + F 70 -7.4 -3.86944 | GATACCTGATAGTGC TAACGGGTGAGCTA CGAAAA TGGCTCACCCGAAA TTTCATACTTCTGCC TERM 552 407707 - 407729 + G 86 -12.7 -3.5241 | overlap 407715 407720 407722 TATGTGTCTGAATTT GATGGGGGC AGGCG GCCCCCGTC TGTTTGTCGCGGGTC TERM 553 407715 - 407731 + G 81 -10.1 -3.87373 | overlap 407707 407720 407722 TGAATTTGATGGGGG CAGGCGG CCC CCGTCTG TTTGTCGCGGGTCTG TERM 554 408429 - 408389 - g 95 -9.9 -4.65182 | gap 3 TACAAAGCAAAGAAA GCCGGACGT-A-ACCG-CAC CGAA GTGGCGGCCTGACGTCCGGC AAAAGCCATCAGGAT yaiC 407306 - 408421 + | putative diguanylate cyclase proC 409247 - 408438 - | pyrroline-5-carboxylate reductase, NAD(P)-binding yaiI 409367 - 409825 + | hypothetical protein TERM 555 409891 - 409907 + F 100 -6.6 -5.64421 | GGGATGTATTGAGAT TTCCAC CTTAA GTGGAA TTTTTTCTTTACAAT aroL 410008 - 410532 + | shikimate kinase II yaiA 410582 - 410773 + | hypothetical protein aroM 411031 - 411708 + | hypothetical protein yaiE 411780 - 412064 + | hypothetical protein TERM 556 412070 - 412094 + F 80 -6.3 -4.8667 | overlap 412071 412086 CTATCTGTAATTCCT CGCCTTCCCCT TGA ACGGGAGGGCA TTTTTCTGAAATGTC TERM 557 412071 - 412093 + F 75 -9.8 -3.51279 | overlap 412070 412086 TATCTGTAATTCCTC GCCTTCCCCT TGA ACGGGAGGGC ATTTTTCTGAAATGT TERM 558 412086 - 412114 + F 81 -11.1 -3.56092 | overlap 412071 412070 GCCTTCCCCTTGAAC GGGAGGGCATTTT TCT GAAATGTCCTCTC TTTAACCCATAATAA ykiA 412272 - 412553 + | hypothetical protein rdgC 413622 - 412711 - | DNA-binding protein, non-specific TERM 559 413172 - 413184 + g 77 -3.3 -5.03314 | overlap 413157 TACGCAGCAGTGCCA GCGTA TCT TCCGC TTTTTTGGCGCTGGC TERM 560 414629 - 414582 - g 77 -9.8 -3.69354 | gap 1, opp_overlap 414577 414611 414612 GCGGAGAATGTGAAA CGCCG-GTACGCAAGGCGAAACA TGG TGATTCGAGCGGCGTACGCGGCG CTGCATGGTTATGGC mak 413747 - 414655 + | manno(fructo)kinase araJ 416108 - 414924 - | putative major facilitator class transporter TERM 561 415642 - 415632 - G 74 -2.4 -5.14163 | AGCGATCAACAAAAA GGTG TAG CGCC AGCTAAATTCCTGAC TERM 562 415946 - 415931 - G 74 -3.2 -5.00884 | overlap 415942 AGCGGCTGGAAAAAA GCGC GATTATAG GCGC ACCGACCACCACCCC sbcC 419377 - 416234 - | exonuclease, dsDNA, ATP-dependent TERM 563 416584 - 416598 + g 73 -11.4 -2.77962 | overlap 416583 CAACAACCTCAACTT CCAGCG CTT CGCTGG CTTTGCGCTGTAACA TERM 564 417888 - 417903 + g 85 -10.4 -4.27192 | GCTTGTAACTGCGCG CGCTGG GCTT CCAGCG TTTTAATGCGAGTTT TERM 565 418531 - 418552 + g 87 -5 -5.29445 | GTTGTGCCAGACTGA GCGCCGCC AGTTGA GGTTGCGC TTTTTCTTCTTCGGC sbcD 420576 - 419374 - | exonuclease, dsDNA, ATP-dependent TERM 566 419983 - 419999 + g 70 -6.5 -4.25104 | opp_overlap 419982 419978 419983, overlap 419961 CGTGCCAATATAAAT GTCACGC ACG GCGTCAC TTTTACTGGCACCCA TERM 567 420115 - 420129 + g 75 -5.7 -4.67011 | overlap 420115 ATCAGTAATAGCCGC CAGCA AATGC TGCTG TTTTTCAATACCGTT TERM 568 421422 - 421436 + G 74 -6.4 -4.57341 | GGTGCAGACCGTGCG CGGTAC AGG GTATCG TTTTTCAACCCGCTT phoB 420766 - 421455 + | DNA-binding response regulator in two-component regulatory system with PhoR (or CreC) TERM 569 421564 - 421590 + G 82 -2.8 -5.28481 | overlap 421562 421578 GAGCTGCTACTTTGC TGCCTCCCGGCT TTC ATCCTGGGTGCA TTTTTTGGTTACCTG phoR 421513 - 422808 + | sensory histidine kinase in two-component regulatory system with PhoB TERM 570 422835 - 422856 + F 100 -13.1 -4.88918 | opp_overlap 422838 CATCTTTTATTGCCA TAAGCCAGC CGAT GCTGGCTTA TTTTCTTTGCAGTCG TERM 571 422853 - 422838 - f 76 -10.4 -3.31144 | opp_overlap 422835 CTTTTATTGCCATAA GCCAGC CGAT GCTGGC TTATTTTCTTTGCAG TERM 572 423488 - 423500 + G 72 -6.9 -4.18018 | ACAGTTTGTTACCTG GCGGT GGG GCCGC TTTTCGCTACGCCGC brnQ 423215 - 424534 + | branched chain amino acid transporter (LIV-II) TERM 573 424556 - 424579 + F 100 -15.3 -5.64304 | opp_overlap 424559 GAACATTTGTTTTAA CCACGGGGC TGCGAT GCCCCGTGG TTTTTTATTGTGTTG proY 424610 - 425983 + | proline transporter TERM 574 426000 - 426028 + F 89 -14.6 -3.03338 | overlap 425990 CCTTGCGTTCTGTAA GCCGGTTCAGGA GGAAA TCCTGATCCGGC TATTCCGAAAGTTAT malZ 426139 - 427956 + | maltodextrin glucosidase acpH 428542 - 427961 - | acyl carrier protein phosphodiesterase TERM 575 429039 - 429028 - g 77 -5.8 -4.7254 | ATGCTCGACGAAAAA CGCA TTCT TGCG CATATTCGCGCCTCG TERM 576 429074 - 429058 - g 74 -10.1 -3.53091 | overlap 429067 ATTCGCGCCTCGAAA GCGCCAA AAC CTGGCGC AGAACTGCTGCTGGG queA 428761 - 429831 + | S-adenosylmethionine:tRNA ribosyltransferase-isomerase TERM 577 429949 - 429965 + G 70 -5.1 -4.33785 | overlap 429946 CTGGTCTTTGATCGT GGCGT AGTGGAA ACGCC TTGTTTTATGCCTGT tgt 429886 - 431013 + | tRNA-guanine transglycosylase TERM 578 431205 - 431188 - g 93 -6.3 -5.23765 | gap 1 CAAAGAACACAAAAA GCTGATGG ACT CCATC-GC TAAAGGTGATGAAGT yajC 431036 - 431368 + | SecYEG protein translocase auxillary subunit TERM 579 431957 - 431911 - g 73 -3.8 -4.86731 | opp_overlap 431951, overlap 431914 431915 431917 CGTTCGTAAAGAAAA CAACTACG-GCCTGAGCATCAC TTTCC GCGATGCTAAAGCTCGT-GATG AAGCCATTGCGTATC TERM 580 432490 - 432475 - g 71 -9 -3.54029 | CTTCACCAAGGACAA CATCGG CAAA CCGATG GCAACCCTATTTGTG secD 431396 - 433243 + | SecYEG protein translocase auxillary subunit secF 433254 - 434225 + | SecYEG protein translocase auxillary subunit TERM 581 434269 - 434250 - f 74 -7.8 -4.11394 | opp_overlap 434250 AGCTGATGTTGAAAA TCCCGGTC AGAA GATCGGGA TTTTTTTTGATGTAA TERM 582 434250 - 434269 + F 100 -10 -5.90981 | opp_overlap 434250 AGCTGATGTTGAAAA TCCCGGTC AGAA GATCGGGA TTTTTTTTGATGTAA yajD 434355 - 434702 + | hypothetical protein TERM 583 434710 - 434730 + T 83 -11.2 -3.33261 | opp_overlap 434710 AGAAGTGATAAAAAA TGCCGGAT ATGAA ATCCGGCA TTCTCACAATTAGAA TERM 584 434730 - 434710 - T 100 -11.2 -5.3236 | opp_overlap 434710 AGAAGTGATAAAAAA TGCCGGAT ATGAA ATCCGGCA TTCTCACAATTAGAA tsx 435624 - 434740 - | nucleoside channel, receptor of phage T6 and colicin K yajI 436461 - 435922 - | putative lipoprotein TERM 585 436257 - 436300 + g 76 -7.4 -4.29396 | opp_overlap 436273, overlap 436255 436289 436290 CTGGTGTTTTTGCTC CAGGCAGAAGGTAAACCCCA CTGC TGGATTTTGCATTCAGCCTG TTTTGCTGAGTGATT TERM 586 436354 - 436369 + g 71 -9 -3.53018 | overlap 436338 436352 CGTCATCTCCTGGTT CAGCGT GCTG ACGCTG TGTTTCATCTGTCGC nrdR 436612 - 437061 + | transcriptional repressor of nrd genes ribD 437065 - 438168 + | fused diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino) uracil reductase TERM 587 438681 - 438665 - g 70 -6.5 -4.17132 | overlap 438666 AAAGCTGGCAACAAA GGTGCAG AAG CTGCACT GACCGCGCTTGAAAT ribE 438257 - 438727 + | riboflavin synthase beta chain TERM 588 438881 - 438870 - g 70 -5.8 -4.23723 | opp_overlap 438858 438855, overlap 438860 GAACAGGATGTAAAA GACG TTGA CGTC CTGTACTTCCGTGAG TERM 589 439020 - 438993 - g 81 -6.2 -4.87665 | gap 1, opp_overlap 438993, overlap 438994 438996 GGCCAGGTAGAAAAA GC-AGTACTGCGC ATT GCGCTGTACGAGC TGTCTAAACGTAGCG TERM 590 439016 - 438996 - g 76 -11.1 -3.32986 | opp_overlap 438993, overlap 438994 438993 CAGGTAGAAAAAGCA GTACTGCGC ATT GCGCTGTAC GAGCTGTCTAAACGT nusB 438747 - 439166 + | transcription antitermination protein TERM 591 439173 - 439213 + F 100 -9.1 -5.43553 | gap 2, opp_overlap 439192 AAAAAGTAATATCCA GGCCGGTAGATTCACGGAA GACCG TTCCGCGA-TC-GCCGGCC TTTTCTTTTTTACCT TERM 592 439950 - 439963 + G 70 -4.5 -4.47328 | overlap 439951 GCGCACGTATTGACC TGGCA TTGC TGCCG TTTTCTGATGCGCTT thiL 439244 - 440221 + | thiamin-monophosphate kinase pgpA 440199 - 440717 + | phosphatidylglycerophosphatase A yajO 441745 - 440771 - | aldoketo-oxidoreductase, NADP-binding TERM 593 441219 - 441229 + g 86 -6.8 -4.98255 | CTGACAAACTGCGCC CAGC CGT GCTG TTTTTGTAGTTCCAG dxs 443662 - 441800 - | 1-deoxyxylulose-5-phosphate synthase, thiamine-requiring, FAD-requiring TERM 594 441973 - 441986 + g 78 -5.2 -4.78237 | CGCCGCTACCTGCGC CGCC CATAAT GGCG TTTTCTTCTACGGTG TERM 595 442176 - 442189 + g 72 -4.5 -4.62336 | overlap 442177 CGCTTCACAATGCCT TTGCC AATT GGCAG TTTTTCCAGTGGCGT ispA 444586 - 443687 - | geranyltranstransferase xseB 444828 - 444586 - | exonuclease VII small subunit TERM 596 445217 - 445207 - g 77 -6.8 -4.55826 | opp_overlap 445206, overlap 445210 CGCAAAAGATGAAAA CCAG CGT CTGG CTATTCGCGACGCCC thiI 445034 - 446482 + | sulfurtransferase required for thiamine and 4-thiouridine biosynthesis TERM 597 446496 - 446519 + T 100 -15.4 -3.55444 | opp_overlap 446485 AATATGTGGTTGTAA CGTCGCATCT GGTC AGATGCGACG TTTACCGCATCCGAC yajL 447126 - 446536 - | hypothetical protein TERM 598 447001 - 447033 + gT 77 -9.1 -3.72576 | opp_overlap 446994 GCAGGTAATCGCCAG GTTACCATCGCTGGC GAC GCTGGCAGTGGTGAC TTTGATACCGCCGCG panE 448000 - 447089 - | 2-dehydropantoate reductase, NADPH-specific TERM 599 448094 - 448040 - H 95 -12.5 -3.61398 | gap 2, opp_overlap 448037 448091, overlap 448041 CCGGGTGTTCAATAA GGC-TATCCCTTAATTGTGCAT-GCTG TTG CGACTATGCACAATTAAGGGATACGTC CTGGTGCGGGACTGT TERM 600 448091 - 448041 - H 86 -13.7 -2.76696 | opp_overlap 448037, overlap 448040 CGGGTGTTCAATAAG GCTATCCCTTAATTGTGCAT-GCTG TTG CGACTATGCACAATTAAGGGATA-C GTCCTGGTGCGGGAC yajQ 448168 - 448659 + | putative nucleotide binding protein (UPF0234 protein) yajR 450151 - 448787 - | putative transporter, major facilitator family TERM 601 449981 - 449965 - G 77 -6.5 -4.67234 | overlap 449966 ACGGAATCTGAAAAA CGGCCTG AGT CAGACCA TAAATACCAATGGCA TERM 602 450266 - 450279 + r 85 -8.1 -4.65895 | opp_overlap 450266 AATGCTAAGAAAAAA GGTGC CGTA GCACC TTTTTAACTGAGAGG TERM 603 450279 - 450266 - R 100 -8.1 -5.4756 | opp_overlap 450266 AATGCTAAGAAAAAA GGTGC CGTA GCACC TTTTTAACTGAGAGG cyoE 451190 - 450300 - | protoheme IX farnesyltransferase TERM 604 451111 - 451091 - G 74 -9.7 -3.45386 | overlap 451079 ACAGGGGATAATCAA TGCTGCCCT TTG AGGCCAGCA AGAATCCCCCAATCA cyoD 451531 - 451202 - | cytochrome o ubiquinol oxidase subunit IV cyoC 452145 - 451531 - | cytochrome o ubiquinol oxidase subunit III TERM 605 451842 - 451859 + g 100 -8.4 -5.18715 | ACCATGTCAACGCCA GCCAGG AGACAA CCTGGC TTTTGTTGTTTTTGT cyoB 454126 - 452135 - | cytochrome o ubiquinol oxidase subunit I TERM 606 452172 - 452199 + g 76 -9.2 -3.85698 | opp_overlap 452179, overlap 452180 GCCTTAGTAATCTCA TCGAAATGCTGG TTTT CCAGTTTTTCGA TTTCTGCCACCGGCA TERM 607 452180 - 452191 + g 81 -5.8 -4.84529 | opp_overlap 452179, overlap 452172 AATCTCATCGAAATG CTGG TTTT CCAG TTTTTCGATTTCTGC TERM 608 452353 - 452363 + g 81 -4.6 -5.07567 | opp_overlap 452337 452338 CCGCAATGACGATAC CGGC ACC GCTG TTTTTTGGCATATGA cyoA 455113 - 454148 - | cytochrome o ubiquinol oxidase subunit II TERM 609 455372 - 455352 - R 82 -4.9 -5.26907 | opp_overlap 455355 CAATATAAAATAAAA CAATTATTT AAC AAATAATTA TCATTGAGGTGACAA TERM 610 455516 - 455562 + r 73 -10.5 -3.0644 | overlap 455516 AAGCGATGCTGATGT TTATTTAGCCGTAATAATTAC GGCGA GTGATTACTACAGCTAAATAA TATTACAGATTACGT ampG 457047 - 455572 - | muropeptide transporter TERM 611 456708 - 456695 - G 75 -4.5 -4.81551 | GAGGCAGAGCAAAAA GCGAT CACC ACCGC CAGTGCCGCCATCCA TERM 612 456886 - 456870 - G 71 -2.9 -4.76892 | overlap 456871 AGAGGAATTTAAAAA CGTAAGC CTG GCCTACC AGAGAGAAGAAACCA yajG 457669 - 457091 - | putative lipoprotein bolA 457974 - 458291 + | regulator of penicillin binding proteins and beta lactamase transcription (morphogene) TERM 613 458345 - 458368 + GF 91 -9.6 -4.59984 | opp_overlap 458338 458350, overlap 458350 GCTAAAGATTTTATG AAAAACGGCC TGCG GGCCGTTTTG TTTTGTCTGGATTTT TERM 614 458350 - 458363 + GF 100 -9.5 -5.23292 | opp_overlap 458350, overlap 458345 AGATTTTATGAAAAA CGGCC TGCG GGCCG TTTTGTTTTGTCTGG TERM 615 458363 - 458350 - gf 95 -9.5 -4.74132 | opp_overlap 458350 458345 AGATTTTATGAAAAA CGGCC TGCG GGCCG TTTTGTTTTGTCTGG TERM 616 458450 - 458435 - gf 90 -6.8 -5.055 | overlap 458437 GGAATTGTGAAAAAA TACGCG ACAG CGCGCA ATAACCGTTCTCGAC TERM 617 458448 - 458437 - gf 72 -7.2 -4.15235 | overlap 458435 AATTGTGAAAAAATA CGCG ACAG CGCG CAATAACCGTTCTCG ECS88_0432 458225 - 458488 + | hypothetical protein TERM 618 458804 - 458856 + G 72 -9.8 -3.34013 | gap 1 ATATCGTTGCTCAGC GTTATGGCGCGTCTGTACG-CCAGG ACGT CCTGGGCGACCTGATGAGCCGTAAC TTCATTGACGCCATC tig 458635 - 459924 + | peptidyl-prolyl cis/trans isomerase (trigger factor) TERM 619 459968 - 459991 + F 100 -12.4 -5.9873 | opp_overlap 459967 459968 TAAATTCGCACAAAG GCCCGTCACC GCCA GGTGGTGGGC TTTTTTTTGTCATGA clpP 460179 - 460802 + | proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine proteases clpX 460928 - 462202 + | ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine protease TERM 620 462231 - 462259 + F 82 -6.7 -4.88711 | opp_overlap 462236, overlap 462236 TACAATTAGTTAACC AAAAAGGGGGGAT TTT ATCTCCCCTTTAA TTTTTCCTCTATTCT TERM 621 462254 - 462236 - f 91 -8.8 -4.88407 | opp_overlap 462236 462231 TTAGTTAACCAAAAA GGGGGGAT TTT ATCTCCCC TTTAATTTTTCCTCT TERM 622 462236 - 462254 + F 90 -11 -4.3623 | opp_overlap 462236, overlap 462231 TTAGTTAACCAAAAA GGGGGGAT TTT ATCTCCCC TTTAATTTTTCCTCT TERM 623 463336 - 463323 - g 77 -3.1 -5.10029 | gap 1, overlap 463313 463325 AGCAAGGTCAAAAAA GACCTG CGT CAGG-C GCAGGAAATCCTTGA TERM 624 463341 - 463325 - g 82 -9.4 -4.17355 | overlap 463313 463323 CAAGGTCAAAAAAGA CCTGCG TCAGG CGCAGG AAATCCTTGATACCG TERM 625 463683 - 463672 - g 70 -4.4 -4.45485 | opp_overlap 463665 ATGAGATCGACAAAA TGTC TTCT GACA TGCGTGGCGATCCGG TERM 626 464385 - 464373 - g 75 -5.5 -4.72986 | GATTTTTACGAAAAA CGTGA CAT CCACG TCCACGTACCGGAAG lon 462390 - 464744 + | DNA-binding ATP-dependent protease La TERM 627 464809 - 464774 - f 77 -4.6 -5.14163 | opp_overlap 464777, overlap 464776 464777 ATGCACTAATAAAAA CAGGGCTGGCAGGC TAATTCGG GCTTGCCAGCCTTT TTTTGTCTCGCTAAG TERM 628 464807 - 464776 - f 74 -7.2 -4.19587 | opp_overlap 464777, overlap 464774 464777 GCACTAATAAAAACA GGGCTGGCAGGC TAATTCGG GCTTGCCAGCCT TTTTTTGTCTCGCTA TERM 629 464806 - 464777 - f 76 -10.7 -3.10668 | opp_overlap 464777, overlap 464776 464774 CACTAATAAAAACAG GGCTGGCAGGC TAATTCGG GCTTGCCAGCC TTTTTTTGTCTCGCT TERM 630 464777 - 464806 + F 100 -13.6 -5.72616 | opp_overlap 464777 464776 464774 CACTAATAAAAACAG GGCTGGCAGGCT AATTCG GGCTTGCCAGCC TTTTTTTGTCTCGCT hupB 464953 - 465225 + | HU, DNA-binding transcriptional regulator, beta subunit TERM 631 465261 - 465280 + F 100 -10 -5.7827 | GTGACGAAGTTCAAG GGCGCATC TACT GATGTGCC TTTTTTATTTGTATT TERM 632 467206 - 467175 - g 86 -3.6 -5.36965 | gap 1 GAAGATCAGAAAAAA GCGATGGTGCAGGGT ATC ACCCAGAACAA-CGC ACAAATCGTCTTTGA ppiD 465417 - 467288 + | peptidyl-prolyl cis-trans isomerase (rotamase D) TERM 633 467331 - 467358 + F 75 -10.6 -2.93447 | opp_overlap 467332 467337, overlap 467337 TTTGCAGCTGTAACA AGAAAAGGTCGC TTTC GCGGCCTTTTCC ATTTCTGAACATTGC TERM 634 467357 - 467332 - f 89 -11.9 -3.63515 | opp_overlap 467331 467337, overlap 467337 TTGCAGCTGTAACAA GAAAAGGTCGC TTTC GCGGCCTTTTC CATTTCTGAACATTG TERM 635 467337 - 467352 + F 79 -8.2 -4.39571 | opp_overlap 467332 467337, overlap 467331 GCTGTAACAAGAAAA GGTCGC TTTC GCGGCC TTTTCCATTTCTGAA TERM 636 467352 - 467337 - f 81 -6 -4.89477 | opp_overlap 467337 467331, overlap 467332 GCTGTAACAAGAAAA GGTCGC TTTC GCGGCC TTTTCCATTTCTGAA ybaV 467439 - 467810 + | hypothetical protein TERM 637 467847 - 467869 + F 75 -10.7 -2.96452 | opp_overlap 467847, overlap 467842 467849 TTTTGCCAGACTGAA GAGGTCATA CCAGT TATGACCTC TGTACTTATAACAGT TERM 638 467869 - 467847 - f 76 -10.7 -3.12351 | opp_overlap 467847 467842 467849 TTTTGCCAGACTGAA GAGGTCATA CCAGT TATGACCTC TGTACTTATAACAGT ybaW 467916 - 468314 + | hypothetical protein queC 469061 - 468366 - | queuosine biosynthesis protein TERM 639 468690 - 468716 + g 82 -9.4 -4.21194 | GGAGAAATCCGTTTC GCAGACGCCG GTAATTA CGGCTTCTGC TTTTACCTGATACGC TERM 640 469100 - 469088 - R 87 -6.3 -5.29445 | CTTGAACAATAAAAA CGTTA TGG TAACG CCTGCGATTAACCCG ybaE 470826 - 469126 - | hypothetical protein TERM 641 469474 - 469492 + g 79 -2.2 -5.1925 | overlap 469475 469476 GTCTGCGTGTGCCAG TAGGGTCG TGT CGTCCCAG TTTTTTGCGTTATGA TERM 642 470415 - 470374 - G 74 -8.1 -4.09685 | gap 2, opp_overlap 470405, overlap 470376 GGTCAGGCCGGAAAA TATCTGCCCGGCCAGATGC TGCTCG GCA-C-GGCCGGGCAAAAA GCCCGGTTGTAGCGG TERM 643 470413 - 470376 - G 81 -10.7 -3.64716 | gap 2, opp_overlap 470405, overlap 470374 TCAGGCCGGAAAATA TCTGCCCGGCCAGATGC TGCTCG GCA-C-GGCCGGGCAAA AAGCCCGGTTGTAGC TERM 644 470405 - 470421 + g 76 -10.8 -3.33261 | opp_overlap 470376 470374 470416 470418 TGCTGCTCGGCACGG CCGGGC AAAAA GCCCGG TTGTAGCGGTTCGAG TERM 645 471349 - 471338 - gH 95 -5.8 -5.44119 | overlap 471339 TCGATGTCAAAAAAA TGCC ACTC GGCA GCGTCACCAAGATCT cof 470926 - 471744 + | thiamin pyrimidine pyrophosphate hydrolase TERM 646 471762 - 471777 + GF 100 -11.8 -5.86332 | AGATCCCTTCCAGCA CCGGGC AATT GCCCGG TTTTTTTTGCGTTGA TERM 647 471884 - 471870 - gf 72 -4.3 -4.6008 | AAAATAGAATTAAAA GAGAA AAAAA TTCTC TGTGGAAGGGCTATG TERM 648 472088 - 472075 - gf 74 -2.3 -5.03314 | TGGATCCGGAAAAAA TAGGC CTCG GCCTG ACCGCCTTTGTGCTG ybaO 471669 - 472355 + | putative DNA-binding transcriptional regulator (Lrp-like) mdlA 472385 - 474157 + | putative fused ATPase and permease component of metabolite transporter mdlB 474150 - 475931 + | putative fused ATPase and permease component of metabolite ABC transporter TERM 649 475968 - 475991 + F 90 -8.9 -4.68645 | opp_overlap 475963 475968 GGTGCAAAAATGTAA CGCACTGTG CACTGT CATAGTGCG TTTTCATTTTCAATC glnK 476112 - 476450 + | nitrogen assimilation regulatory protein for GlnL, GlnE, and AmtB TERM 650 476622 - 476635 + G 72 -5.9 -4.3739 | overlap 476630 TGTTTATGACCGTTC CGGGG ATTG CCCTG TTTTATGGAGGGCTG TERM 651 476921 - 476933 + G 76 -4.1 -4.93898 | opp_overlap 476914, overlap 476914 GAACGAATCCGCTTC TCAGC TGT GTTGA TTTTTGTGGTGGTAT amtB 476480 - 477766 + | ammonium transporter TERM 652 477809 - 477783 - T 93 -9.5 -5.07053 | gap 1, opp_overlap 477783 477785, overlap 477785 AAGCACTGCAAAAAA CAGCCGGACGGT TTTC ACC-TCCGGCTA TTTTTTTAATTGTGA TERM 653 477783 - 477809 + T 100 -7.3 -5.68023 | gap 1, opp_overlap 477783 477785, overlap 477785 AAGCACTGCAAAAAA CAGCCGGACGGT TTTC ACC-TCCGGCTA TTTTTTTAATTGTGA TERM 654 477785 - 477807 + T 89 -9.9 -4.46828 | gap 1, opp_overlap 477783 477785, overlap 477783 GCACTGCAAAAAACA GCCGGACGGT TTTC ACC-TCCGGC TATTTTTTTAATTGT TERM 655 477807 - 477785 - T 84 -9.9 -4.15748 | gap 1, opp_overlap 477785 477783, overlap 477783 GCACTGCAAAAAACA GCCGGACGGT TTTC ACC-TCCGGC TATTTTTTTAATTGT tesB 478675 - 477815 - | acyl-CoA thioesterase II TERM 656 478705 - 478695 - H 72 -6.8 -4.24342 | overlap 478696 CTCTCCAGTAACAAA GCTG CCG CAGC AAGCCAAAGTGAGTT ybaY 478893 - 479465 + | putative lipoprotein TERM 657 479500 - 479471 - Tf 70 -9.3 -3.23979 | opp_overlap 479472 479476, overlap 479466 479476 GCAATATTAAGCGAA GTTAACCCTCTCC GCCC GGAGAGGGTTAGT AGTTCCAGCGATAAA TERM 658 479472 - 479499 + TF 89 -15 -2.71364 | opp_overlap 479466 479471 479476, overlap 479476 CAATATTAAGCGAAG TTAACCCTCTCC GCCC GGAGAGGGTTAG TAGTTCCAGCGATAA TERM 659 479476 - 479495 + TF 93 -13.6 -3.27298 | opp_overlap 479466 479471 479476, overlap 479472 ATTAAGCGAAGTTAA CCCTCTCC GCCC GGAGAGGG TTAGTAGTTCCAGCG TERM 660 479495 - 479476 - Tf 93 -13.6 -3.21258 | opp_overlap 479476 479472, overlap 479466 479471 ATTAAGCGAAGTTAA CCCTCTCC GCCC GGAGAGGG TTAGTAGTTCCAGCG ybaZ 479885 - 479496 - | putative methylated DNA-protein cysteine alkyltransferase TERM 661 479889 - 479879 - Gg 72 -6.8 -4.16016 | GCATTGCGCAAGAAA CCAG CAT CTGG CACGCAATGGGTTGC ECS88_0452 479789 - 480127 + | hypothetical protein ybaA 480186 - 480539 + | hypothetical protein ylaB 482131 - 480581 - | conserved hypothetical protein; putative inner membrane protein TERM 662 480999 - 481017 + g 80 -5.2 -5.02074 | TAGTGATTGATCATT TCACGCAG CAA TTGCGGGA TTTTTTCCGAGGTGA TERM 663 482257 - 482280 + r 86 -13.2 -2.88663 | ATCGTTGTCATTTGA CCAGGCGTAG AGCT TTACGCCTGG TATGTACCCCTAACT ylaC 482765 - 482295 - | conserved hypothetical protein; putative inner membrane protein TERM 664 482406 - 482392 - G 77 -11.4 -3.13403 | opp_overlap 482383, overlap 482390 TGTTCTTTATGAACA TCCGCG ACA CGCGGA GAGTTCAGGATGGCT maa 483432 - 482881 - | maltose O-acetyltransferase hha 484070 - 483606 - | modulator of gene expression, with H-NS ybaJ 484224 - 483850 - | hypothetical protein TERM 665 484749 - 484734 - R 100 -11.8 -5.28176 | opp_overlap 484734 GTTATGTATAAAAAA GGCCGC TTGC GCGGCC TTAGTGATTACACGT TERM 666 484734 - 484749 + r 83 -11.8 -3.27476 | opp_overlap 484734 GTTATGTATAAAAAA GGCCGC TTGC GCGGCC TTAGTGATTACACGT acrB 487918 - 484769 - | multidrug efflux system protein TERM 667 486089 - 486110 + g 79 -4.4 -4.93877 | GAAGCCGTTAACGGC GAACACCG ACTCAA CGTTGTTC TTTTCTTTGGTCAGA TERM 668 486878 - 486891 + g 70 -3.8 -4.62872 | overlap 486872 GAACACGAGGATGAT CGCT TCGACC AGCG TTTTTACCACTTCGT TERM 669 487792 - 487831 + g 100 -15.8 -3.57144 | AGGCGGAGATCGTTA CTGCCGGCGGTGCAAT CGTAGGAT ATTGCGCCACCGGCAG TTTGAGGATCGCCAG acrA 489134 - 487941 - | multidrug efflux system TERM 670 489105 - 489123 + g 93 -6 -5.17744 | opp_overlap 489101 CATCAGAACGACCGC CAGAGG CGTAAAC CCTCTG TTTTTGTTCATATGT acrR 489276 - 489923 + | DNA-binding transcriptional repressor TERM 671 490346 - 490333 - g 70 -3.7 -4.62783 | overlap 490316 CAGCTACGGCAAAAA GTCGC TGAA GCGCC GGAAAAAATGCGCCA TERM 672 490867 - 490853 - g 79 -4.2 -5.15969 | overlap 490831 CTTTAACCGAAAAAA CGGC GCAGGAA GCCG TCTCCCCGGATGAAG TERM 673 493400 - 493384 - g 78 -9.3 -3.98236 | AAACGCGACTACAAA GGCGACG ATC CGACGCC AGCGGTAGGGTAATA kefA 490051 - 493413 + | fused conserved hypothetical protein ; mechanosensitive channel protein ybaM 493786 - 493625 - | hypothetical protein priC 494327 - 493800 - | primosomal replication protein N'' ybaN 494397 - 494774 + | conserved hypothetical protein; putative inner membrane protein apt 494927 - 495478 + | adenine phosphoribosyltransferase TERM 674 495530 - 495554 + F 71 -9.9 -3.09492 | overlap 495530 495532 495548 CACAAGATGTGCATT CAGCCTCGCCG TTC TGACGGGGCTG TGTTAGCATTACCCC TERM 675 495789 - 495761 - g 72 -5.2 -4.56597 | gap 1, opp_overlap 495730 GTGGCGTCGGAAAAA CCTCTATCGCCCG ACTG CTGGCGA-AGGGG CTAAACTGCGAAACT TERM 676 496849 - 496829 - g 74 -10.4 -3.53224 | overlap 496830 TACCGCTCCCGGAAA CCACCAGC CAGGT GCTGGCGG CGCGCCAGCAGTTGC TERM 677 496930 - 496903 - g 76 -10.5 -3.36112 | gap 1 GCAAAAAAGAGTGAA CCGGCAGC-CGC TACCC GCGCGCGGCCGG TGAATAACGCTGCGC TERM 678 497087 - 497071 - g 75 -4.3 -4.7497 | overlap 497074 GTGATGCAGCAAAAA GAAGTGG TCG CCACGCC GAAGGCGCTGAAAAA TERM 679 497084 - 497074 - g 77 -6.8 -4.4831 | overlap 497071 ATGCAGCAAAAAGAA GTGG TCG CCAC GCCGAAGGCGCTGAA TERM 680 497139 - 497123 - g 93 -6.5 -5.27779 | TGGAACATGAAAAAA CGCCG GAACTGG CGGCG AAGCTGGCGGCAGAA TERM 681 497284 - 497242 - g 71 -9.1 -3.56594 | opp_overlap 497251 497257 TTAAATGCCTGGAAA GAGGAGAGCGACAACGCAG TATGT CTGCATTTGCGCTCCTCTC AGCGGCATTTGAACA TERM 682 497454 - 497437 - g 95 -6.9 -5.17744 | opp_overlap 497434 497437 ATATACGAAGAAAAA CTTGCGC AGGC GCGCGAG TCCATTATTGCGGAT dnaX 495607 - 497538 + | DNA polymerase III/DNA elongation factor III, tau and gamma subunits TERM 683 497540 - 497556 + F 78 -10.9 -3.25015 | TCCGCCCCATTTGAT CGTAAGC ACA GCTTACG TTCGTCATCCTTAAC TERM 684 497664 - 497652 - g 91 -3.4 -5.49234 | AGATGCAAGAAAAAA TGCA GAAAA TGCA GGAAGAGATCGCGCA ybaB 497591 - 497920 + | hypothetical protein TERM 685 498000 - 497956 - g 72 -10.6 -3.07622 | gap 1, overlap 497946 497959 ACACAGCTTATGGAA GCACTGCGCTGTCTGCCGGGC GTTG GCCCGA-AGTCGGCGCAGCGT ATGGCGTTCACGCTG TERM 686 497997 - 497959 - g 81 -13.1 -2.75382 | gap 1, overlap 497956 CAGCTTATGGAAGCA CTGCGCTGTCTGCCGGGC GTTG GCCCGA-AGTCGGCGCAG CGTATGGCGTTCACG TERM 687 498340 - 498329 - g 87 -4.4 -5.21709 | TGGCAGAGGAAAAAA TCAC TGAA GTGA TCCTCGCCACCAACC recR 497920 - 498525 + | gap repair protein TERM 688 498525 - 498560 + F 72 -10.4 -2.90804 | opp_overlap 498516 498531, overlap 498524 498534 TAAGATTCGTTTTTA AGCAAACGAGAGCAGG ATCA CCTGCTCTCGCTTGAA ATTATTCTCCCTTGT TERM 689 498554 - 498531 - f 100 -16.8 -3.90112 | opp_overlap 498525 498524 498534, overlap 498516 TCGTTTTTAAGCAAA CGAGAGCAGG ATCA CCTGCTCTCG CTTGAAATTATTCTC TERM 690 498534 - 498551 + F 77 -11.3 -2.55818 | opp_overlap 498531, overlap 498525 498524 TTTTTAAGCAAACGA GAGCAGG ATCA CCTGCTC TCGCTTGAAATTATT TERM 691 499096 - 499076 - g 100 -10.5 -4.62069 | GCGGCAGGCGAAAAA CCAGAAAAC GGC GTCTTCTGG GAATCGGCTGGCGAA TERM 692 499761 - 499745 - g 81 -7.3 -4.60487 | overlap 499747 GACGACGCGGAAAAA TACCAGA CCT TCTGGCA ACAGTTTGGCCTGGT TERM 693 499759 - 499747 - g 72 -7.7 -3.91506 | overlap 499745 CGACGCGGAAAAATA CCAGA CCT TCTGG CAACAGTTTGGCCTG htpG 498635 - 500509 + | molecular chaperone HSP90 family TERM 694 500515 - 500542 + F 100 -15.7 -5.62288 | GGTTTCCTGATGTCA TGCCGGATGAC CTTCGT GTCATCCGGCA TTTTTCTTTTCTTCA adk 500690 - 501334 + | adenylate kinase TERM 695 502396 - 502351 - g 76 -4.1 -5.00616 | overlap 502353 502357 GCGGGCGGGAAAAAA TATGAATATATTCCGGCGC TTAATGCC ACGCCGGAACATATCGAAA TGATGGCTAATCTTG TERM 696 502394 - 502353 - g 70 -6.7 -4.13561 | overlap 502351 502357 GGGCGGGAAAAAATA TGAATATATTCCGGCGC TTAATGCC ACGCCGGAACATATCGA AATGATGGCTAATCT TERM 697 502390 - 502357 - g 77 -9.7 -3.66995 | overlap 502353 502351 GGGAAAAAATATGAA TATATTCCGGCGC TTAATGCC ACGCCGGAACATA TCGAAATGATGGCTA hemH 501466 - 502428 + | ferrochelatase aes 503384 - 502425 - | acetyl esterase TERM 698 502453 - 502477 + g 70 -5.7 -4.3129 | gap 1, opp_overlap 502450, overlap 502451 GTAAAGAACTGAGCG CCGTCG-CGA AGAGCC TCGTCGGCGG TTTTCATCATCCGTG TERM 699 504467 - 504446 - g 78 -7.9 -4.37198 | opp_overlap 504446 504453, overlap 504450 AAGCGAAACGTAAAA CCCAGCATC CGCT GCTGCCGGG TGCTATAGCGGAATT gsk 503536 - 504840 + | inosine/guanosine kinase TERM 700 504858 - 504889 + T 84 -8.6 -4.3586 | opp_overlap 504868 504869, overlap 504859 504868 504869 TATCGTCGGTTCGTA GGCCAGATAAGGCG TTCA CGCCGCATCTGGCA TTTTGCTCTCAATGC TERM 701 504859 - 504888 + T 83 -12.1 -3.21034 | opp_overlap 504868 504869, overlap 504858 504868 504869 ATCGTCGGTTCGTAG GCCAGATAAGGCG TTCA CGCCGCATCTGGC ATTTTGCTCTCAATG ybaL 506646 - 504970 - | putative monovalent cation:proton antiporter (CPA2 family) TERM 702 506881 - 506849 - R 86 -10.6 -4.13945 | opp_overlap 506839, overlap 506852 ATGGCGACTGTAAAA CGATGCAGCCAAAG TTTGC CTTTGGCTGCAATG AAATCAGTCTTTATG TERM 703 506878 - 506852 - R 93 -15.3 -3.09831 | opp_overlap 506839, overlap 506849 GCGACTGTAAAACGA TGCAGCCAAAG TTTGC CTTTGGCTGCA ATGAAATCAGTCTTT fsr 508105 - 506885 - | fosmidomycin efflux system, member of the major facilitator superfamily TERM 704 508071 - 508086 + g 72 -6.8 -4.23045 | gap 1, overlap 508070 508071 GTTGACGCAGCCGCG CCC-GCC ACA GGCTGGG TTTGTTCACTCATTG TERM 705 509826 - 509847 + G 70 -10.1 -3.14132 | opp_overlap 509795 AACTTCAATGCCACC GGCGGGGAT GGCT ATCCGCGCC TTGATAACAAACCGG ushA 508323 - 509975 + | bifunctional UDP-sugar hydrolase and 5'-nucleotidase TERM 706 509985 - 510011 + T 100 -15.2 -3.9777 | opp_overlap 509980 509981 510001, overlap 509976 CAGTAATGAACCCCG TCGCGGCGTCAT GAT ATGACGCCGCCA TTTATGAATATTGAA ECS88_0478 510516 - 510013 - | hypothetical protein ECS88_0479 511313 - 510513 - | hypothetical protein TERM 707 511177 - 511150 - G 73 -11.4 -2.8071 | gap 1, opp_overlap 511149 CCAACAACAAATTCA TCGAGCT-GTGCT TTC AGCACCAGCCCGA ATTCCTCACGATACC ybaK 511816 - 511337 - | hypothetical protein TERM 708 511475 - 511486 + g 79 -2.2 -5.24129 | GGGGGCGTCGATAAT CGTT GGCA GACG TTTTTTCTGCCCCAG TERM 709 511993 - 512014 + r 95 -7.3 -5.40072 | overlap 511994 AAATTCCTCTTTGAC GGGCCAATA GCGA TATTGGCCA TTTTTTTAGCGCAAC TERM 710 511994 - 512013 + r 85 -10.8 -3.83561 | overlap 511993 AATTCCTCTTTGACG GGCCAATA GCGA TATTGGCC ATTTTTTTAGCGCAA ybaP 512814 - 512020 - | hypothetical protein TERM 711 512616 - 512635 + g 73 -3.5 -4.7657 | TGGAAACATCCGCCT CGACGAT CAGCGC ATCGGCG TTTTTGAGCTTTTTG ECS88_0483 512917 - 513249 + | putative RelE/ParE family protein, cytotoxic translational repressor of toxin-antitoxin stability system ybaQ 513285 - 513626 + | putative DNA-binding transcriptional regulator TERM 712 513672 - 513643 - T 100 -14.3 -3.30338 | opp_overlap 513640 513667, overlap 513661 ATAATTTCCCTATAA CGGATGCGCCACC CTAA AGCAGCGCATCCG CAATGATGTACTTAT copA 516188 - 513684 - | copper transporter TERM 713 514987 - 514946 - G 72 -8.7 -3.78778 | gap 1, overlap 514939 GCACCATACGAATAA TCCGCGACAGCGTAGTATGG CTG CCA-ACCGCACTGGCGCGAA ACAGCACGCTACCGT TERM 714 515171 - 515184 + g 91 -3.1 -5.47399 | gap 1, opp_overlap 515158, overlap 515171 515172 TACCTGGCTGAACAT C-TGCC AGC GGCACG TTTTTTTCACCTTCG ybaS 516450 - 517382 + | amidase, possibly glutaminase TERM 715 517947 - 517966 + G 72 -7.8 -3.88175 | ATATTTCCGTTTCTG CGCCCC CCAGTTCC GGGGCG TTCTTCTCCTGTATC ybaT 517385 - 518677 + | putative nitrogen-containing metabolite transporter TERM 716 518845 - 518827 - g 73 -3.8 -4.7497 | GCGATGTAGCAAAAA TTACCGGC CTG ACCAGCAA AGCCATTCGCTTCTA cueR 518802 - 519209 + | DNA-binding transcriptional activator of copper-responsive regulon genes ECS88_0489 519416 - 519213 - | hypothetical protein ECS88_0490 519835 - 519413 - | hypothetical protein TERM 717 519638 - 519650 + g 75 -5.5 -4.67353 | CGCCTGGGCATGTTG TGCGG CTT CTGCA TTTTTAAATGCCTGC ECS88_0491 520937 - 519921 - | hypothetical protein ECS88_0492 521304 - 521666 + | hypothetical protein ybbJ 522224 - 521769 - | conserved hypothetical protein; putative inner membrane protein ybbK 523141 - 522224 - | putative protease, membrane anchored ybbL 523287 - 523964 + | putative transporter subunit: ATP-binding component of ABC superfamily ybbM 523951 - 524730 + | putative permease of an ABC transporter TERM 718 524759 - 524728 - T 93 -10.9 -4.4846 | opp_overlap 524733 524736, overlap 524729 CAATTGAAGAAGAAA TGATGCGATGCCG GATGCG CAGCATCGCATCC GGCGTTGTGGTTCAT TERM 719 524758 - 524729 - T 100 -14.4 -3.27992 | opp_overlap 524733 524736, overlap 524728 AATTGAAGAAGAAAT GATGCGATGCCG GATGCG CAGCATCGCATC CGGCGTTGTGGTTCA TERM 720 524733 - 524766 + T 100 -16.8 -2.81547 | opp_overlap 524729 524728, overlap 524736 GAAGAAGAAATGATG CGATGCCGGATGCG CAGCAT CGCATCCGGCGTTG TGGTTCATGTGCCGA TERM 721 524736 - 524763 + T 100 -14.9 -3.55487 | opp_overlap 524729 524728, overlap 524733 GAAGAAATGATGCGA TGCCGGATGCG CAGCAT CGCATCCGGCG TTGTGGTTCATGTGC ybbN 525647 - 524793 - | putative thioredoxin domain-containing protein ybbO 526517 - 525708 - | putative oxidoreductase with NAD(P)-binding Rossmann-fold domain tesA 527133 - 526507 - | multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1 TERM 722 527067 - 527047 - GH 79 -9 -3.86312 | gap 1 ACCCAGAATCAATAA CGTGTCCGC TGCG GCGG-CACG GAAGGTTAACAGGAC TERM 723 527348 - 527377 + GH 72 -4.3 -4.72386 | gap 1, opp_overlap 527342 527341 ACGAAGAAGCGCGGG CAAAG-TTGCGCGC GAA GCACGTAGGCTTTG TTTTTCAGTCATTTA ybbA 527101 - 527787 + | putative transporter subunit: ATP-binding component of ABC superfamily TERM 724 528264 - 528274 + G 81 -8.2 -4.39386 | opp_overlap 528264, overlap 528260 GAAGTGATTCAGGAA CCGG ATT CCGG TTTTAATCCTTTCCA ybbP 527784 - 530198 + | putative ABC transporter permease ybbB 531351 - 530257 - | tRNA 2-selenouridine synthase, selenophosphate-dependent TERM 725 530731 - 530744 + g 72 -4.5 -4.70879 | CCACAAGCGCAAATT CTGAC GGGC GTCGG TTTTTAGCATTTCGG ybbS 532346 - 531420 - | putative DNA-binding transcriptional activator of the allD operon TERM 726 532368 - 532383 + H 71 -4 -4.82819 | gap 1, opp_overlap 532368, overlap 532370 GTATCCCCTTTTAAA TC-CGCA AGT TGCGTGA TTTTCTTATCCTCTG allA 532576 - 533058 + | ureidoglycolate hydrolase allR 533136 - 533951 + | DNA-binding transcriptional repressor TERM 727 533964 - 533981 + F 100 -12.7 -5.40474 | TAGTGTCTGTCGTAT CCCGCTC TGCG GAGCGGG TTTTTTTGACAAAAT gcl 534041 - 535822 + | glyoxylate carboligase hyi 535835 - 536611 + | hydroxypyruvate isomerase glxR 536711 - 537589 + | tartronate semialdehyde reductase, NADH-dependent TERM 728 537632 - 537605 - f 93 -9.3 -5.07486 | gap 1 TACCCGCAATAAAAA TGGCCGATATCA GAAAA TGA-ATCGGCCA GCAATATTAAAAAAA TERM 729 537674 - 537687 + F 89 -2.5 -5.67711 | overlap 537674 537677 AAGATGTTGCTTCAG TATTA AAAA TAATA TTTTTATTTTATTTG TERM 730 537677 - 537693 + F 79 -5.3 -5.12172 | overlap 537674 537674 ATGTTGCTTCAGTAT TAAAAAT AAT ATTTTTA TTTTATTTGTTCCTC TERM 731 538541 - 538517 - g 72 -7.1 -4.1899 | CGACTTTACGCAAAA CGCCCACTC GTTTCGT GAGCAGGCG CTGGGGCAAACGCTG ybbW 537759 - 539213 + | allantoin or uracil transporter TERM 732 539395 - 539361 - g 73 -3.7 -4.77986 | gap 2, overlap 539362 TTAAAGACGGAAAAA TTGCTGCTATCGGCCAG GAT CTGGGCGAT-GCAA-AA GACGTTATGGATGCG TERM 733 539533 - 539519 - g 90 -10 -4.30576 | CGCGCAGCAGCAAAA GGTGGT ATC ACCACC ATGATCGAAATGCCG TERM 734 540416 - 540404 - g 72 -4.7 -4.72272 | GGTCTGCAGCAAAAA GGCCG TAT CGCCC CAGGAAAAGATGCCG allB 539273 - 540634 + | allantoinase TERM 735 540648 - 540668 + F 76 -10.4 -3.36671 | AATCTGGCCCTGCAA TGCCCGTC CTTGT GGCGGGCA TTCTCCGGTTAAGGT TERM 736 540710 - 540740 + G 100 -6.9 -5.63012 | gap 1, opp_overlap 540718 540719 CAATTTTGCAGTGGG CCGC-GAAAGCCTG TTAT CAGGATTTCAGTGG TTTTTCTTTATTTTT ybbY 540690 - 541991 + | putative uracil/xanthine transporter glxK 542013 - 543158 + | glycerate kinase II TERM 737 543176 - 543195 + T 100 -10.8 -5.47821 | opp_overlap 543174 ATTACCTTTAAAGCG GATGCGAT TTAT ATCGCATC TTTTTTTACCTGAAT TERM 738 543244 - 543225 - T 100 -13.6 -5.67063 | TTGACTACAAAAAAA GCCACGGT ATAA ACCGTGGC AAAATCCAACATAGC ylbA 544072 - 543287 - | hypothetical protein allC 545318 - 544083 - | allantoate amidohydrolase TERM 739 545248 - 545233 - G 70 -6.1 -4.21141 | GGCGAATAAAGTAAA CGGGT CATCCC ACCCG CTGGGTCAGCGCCAA allD 546389 - 545340 - | ureidoglycolate dehydrogenase TERM 740 546470 - 546447 - H 70 -6.1 -4.27861 | overlap 546449 AACATACAGGGAAAA TATCTGGAT TATGTG ATCCAGACA GGCAAAAAAATATAG TERM 741 547198 - 547187 - g 75 -7.2 -4.30448 | AAATCCAACTTAAAA CCCG CGCG CGGG AAAAAGGCTTGCTGG fdrA 546706 - 548373 + | putative acyl-CoA synthetase with NAD(P)-binding Rossmann-fold domain ylbE 548383 - 549642 + | hypothetical protein TERM 742 550221 - 550231 + G 74 -2.4 -5.1615 | CTTTAGATGCGCGCT CCGG TCG CCCG TTTTTTGCCTGTTCC ylbF 549653 - 550468 + | hypothetical protein TERM 743 550796 - 550812 + G 82 -7.9 -4.56597 | CGCGCATTGAGGTTT CGCCTGA TGA TCCGGCG TTTTTACAGCCAGAG ybcF 550465 - 551358 + | putative carbamate kinase purK 552578 - 551511 - | N5-carboxyaminoimidazole ribonucleotide synthase purE 553084 - 552575 - | N5-carboxyaminoimidazole ribonucleotide mutase ECS88_0523 553509 - 553180 - | hypothetical protein lpxH 554342 - 553620 - | UDP-2,3-diacylglucosamine pyrophosphatase TERM 744 554115 - 554101 - G 74 -6.4 -4.46212 | TTGCCGAGCAGAAAA TCACGG TTG CCATGA ATGAAATAACAGGGA TERM 745 554307 - 554272 - G 100 -12.7 -5.00616 | gap 1, opp_overlap 554281 TCCCCCGCTAAAAAA CGCAGAA-AACCGGCG GTGAT CGCCGGTTCTTCCACG CAGAGATGAAGATCT TERM 746 554281 - 554297 + g 85 -11.5 -3.61398 | opp_overlap 554272 AAAAAACGCAGAAAA CCGGCGG TGA TCGCCGG TTCTTCCACGCAGAG ppiB 554839 - 554345 - | peptidyl-prolyl cis-trans isomerase B (rotamase B) TERM 747 554596 - 554606 + g 72 -5.4 -4.58283 | GGGCCATTGCCAGCG TACC ACG GGTA TTTTTCAGACCGTTG cysS 555013 - 556398 + | cysteinyl-tRNA synthetase TERM 748 556410 - 556433 + T 100 -16.8 -3.46602 | GTAATTGCGCTATTG CCGGATGCGA GTTT TCGCATCCGG TTATCGTCTGCGCCA ybcI 556955 - 556434 - | conserved hypothetical protein; putative inner membrane protein TERM 749 556812 - 556796 - G 78 -5.1 -4.77036 | opp_overlap 556798 CGCGATGACCAAAAA CATTGCC GTA AGCAACG CCAAATTTAAACGAC TERM 750 557054 - 557033 - R 100 -15.9 -3.95836 | AGTCTGAAAAGAGAA CCGGCCTGT TGAT ACAGGCCGG GAAAGGGATCAGGCA ybcJ 557275 - 557063 - | putative RNA-binding protein folD 558143 - 557277 - | bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase and 5,10-methylene-tetrahydrofolate cyclohydrolase TERM 751 557308 - 557322 + g 72 -7.1 -4.18494 | opp_overlap 557306 557310 TCATGATATTCAACG CACGC CTGTA GCGTG TTTTCAATCAGCGTG TERM 752 557542 - 557559 + g 70 -4.1 -4.72272 | AGTAGATCGGCATTT TCTACGT GGTG ACGCAGA TTTTTAGTGAAACGG ECS88_0530 558193 - 558381 + | hypothetical protein intD 559669 - 558506 - | putative integrase; DLP12 prophage TERM 753 558917 - 558938 + gT 72 -7.2 -4.13341 | ACAGGCGGTATCGTT CAGCGCCA CACCAA TGGCGCGG TTTGATTTGCTCTCT ECS88_0532 559980 - 559525 - | Excisionase from phage origin yfdT 560201 - 559896 - | conserved hypothetical protein; CPS-53 (KpLE1) prophage yfdS 560563 - 560201 - | conserved hypothetical protein; CPS-53 (KpLE1) prophage TERM 754 560387 - 560415 + g 72 -4.5 -4.6313 | overlap 560389 560392 CAGAACACTTTCATT TGCTGGTGGCAGT TCA GCTGACACTGGTA TTATTTTGTTTTCCA yfdR 561090 - 560554 - | conserved hypothetical protein; CPS-53 (KpLE1) prophage TERM 755 561187 - 561202 + r 78 -10.4 -3.62096 | opp_overlap 561187 TTACGTTTCCATAAA TGCCCC CGCA GGGGCA TTTGCAGTAATGAAA TERM 756 561202 - 561187 - R 82 -10.4 -3.86346 | opp_overlap 561187 TTACGTTTCCATAAA TGCCCC CGCA GGGGCA TTTGCAGTAATGAAA yfdQ 562042 - 561218 - | conserved hypothetical protein; CPS-53 (KpLE1) prophage ECS88_0537 562656 - 562108 - | hypothetical protein TERM 757 562545 - 562535 - G 70 -6.8 -4.02733 | CAAAACAGAGAAGAA CACC TGC GGTG GTAGCCGCCCGGATG TERM 758 562653 - 562615 - G 72 -7.4 -3.90048 | opp_overlap 562650 562652, overlap 562613 TGTTTTGTAAAAAGA GCGGTACCAGCCGGAA GCAAGTG TACAAACTGGTACCGC CAAAGCAGTGGCTGT ECS88_0538 563113 - 562859 - | hypothetical protein TERM 759 563170 - 563155 - R 87 -10.4 -4.4078 | opp_overlap 563140 563152 563155 GGTGGGTAATGAAAA GCCACC TTCT GGTGGC TAATTGATGTTGAGG TERM 760 563155 - 563170 + r 72 -10.4 -2.84723 | opp_overlap 563155, overlap 563140 563152 GGTGGGTAATGAAAA GCCACC TTCT GGTGGC TAATTGATGTTGAGG ECS88_0539 563885 - 563193 - | putative repressor protein CI TERM 761 563844 - 563858 + g 74 -10 -3.52668 | GGCGATTTTCATGTT CTTCGC CTG GCGAAG TTGTCTGACTCGATT ECS88_0540 563983 - 564243 + | putative lambda repressor-like DNA-binding domains TERM 762 564548 - 564535 - g 74 -8.1 -4.0492 | overlap 564523 GAACGCCGATATAAA CCAGC GCCT GCTGG AAGTCATCGAACAGA ymfL 564236 - 564793 + | putative nucleic acid-binding protein; e14 prophage TERM 763 564829 - 564855 + G 81 -10.8 -3.62597 | opp_overlap 564828, overlap 564831 CGTTTGTCGCAACAG CTGGTGGTCAGC GTC GCTGAACACCTG TTGTTACGGCATGAA TERM 764 564831 - 564853 + G 80 -12 -3.39288 | opp_overlap 564828, overlap 564829 TTTGTCGCAACAGCT GGTGGTCAGC GTC GCTGAACACC TGTTGTTACGGCATG TERM 765 565207 - 565220 + G 100 -5.9 -5.5112 | CATACGGCGACAATT GGCGC GTTA GCGTC TTTTTTGTTGCTACA TERM 766 565797 - 565807 + G 70 -6.8 -4.06505 | AATTCATCAGGTCTG GCTG CAG CAGC TTTATCCTATGTTGG ECS88_0543 564790 - 565938 + | putative antirepressor from phage TERM 767 566072 - 566085 + G 91 -5.2 -5.40474 | opp_overlap 566072 CGCACATGCGCATAA CCGC GCTTCA GCGG TTTTTTTGCGCACGT TERM 768 566660 - 566670 + G 70 -6.8 -4.06505 | AATTCATCAGGTCTG GCTG CAG CAGC TTTATCCTATGTTGG ECS88_0544 565935 - 566801 + | Putative antirepressor from phage TERM 769 567021 - 566995 - g 76 -3.6 -5.00616 | overlap 567001 TTGCTCCGGAAAAAA CATGAAGCATCT CGG AGGTGCAGCATG AGTATGGAGCTGATG ECS88_0545 566798 - 567022 + | hypothetical protein ECS88_0546 566980 - 567837 + | putative replication protein from phage TERM 770 568282 - 568267 - gf 72 -6.8 -4.18018 | GGTGCTTACGGAAAA GCAGCA AGCG CGCTGC ATCGGGTGAAGAGTG yfdN 567834 - 568328 + | conserved hypothetical protein; CPS-53 (KpLE1) prophage ECS88_0548 568295 - 568981 + | putative phage AdoMet-dependent methyltransferase TERM 771 569264 - 569253 - g 70 -5.8 -4.25104 | overlap 569254 569258 TGCCGGTGAGGAAAA CGCA AGGC TGCG TGCAACCCACTGGTT ECS88_0549 568978 - 569304 + | putative LexA repressor TERM 772 569693 - 569670 - g 85 -6.7 -4.81685 | overlap 569671 AGTAAGTACGAAAAA GCGAGTTGC AAATTA GCAACTCGG TAACGGAATTGAGCA TERM 773 569692 - 569671 - g 74 -10.2 -3.47927 | overlap 569670 GTAAGTACGAAAAAG CGAGTTGC AAATTA GCAACTCG GTAACGGAATTGAGC ECS88_0550 569301 - 569696 + | putative Crossover junction endodeoxyribonuclease TERM 774 570047 - 570069 + G 76 -10.6 -3.29471 | opp_overlap 570049, overlap 570049 ATTATTGGAAGAAGA AACTACGGGA GAT TCCCGTAGTA TTCCTGTCATCACCA TERM 775 570067 - 570049 - g 100 -13.2 -4.45738 | opp_overlap 570047 570049 TATTGGAAGAAGAAA CTACGGGA GAT TCCCGTAG TATTCCTGTCATCAC TERM 776 570049 - 570067 + G 85 -13.2 -3.214 | opp_overlap 570049, overlap 570047 TATTGGAAGAAGAAA CTACGGGA GAT TCCCGTAG TATTCCTGTCATCAC ECS88_0551 569847 - 570674 + | conserved hypothetical protein from phage origin TERM 777 571356 - 571376 + G 72 -4.6 -4.66537 | overlap 571359 GCTGGCGCTGAAAGT GGATCCGG AGTCG CCGGAGTC TTTTATGTTACGCCC TERM 778 571451 - 571419 - g 75 -7 -4.4078 | gap 1, opp_overlap 571419 571418 571416, overlap 571422 CTGGGTTAATGAAAA GTACACGCGCTGGGT TAAG ACGCAGC-CGTGTGC ATGTTGTGGAAAGCC TERM 779 571579 - 571522 - g 75 -7.1 -4.4017 | gap 1, opp_overlap 571522 571524 571571, overlap 571523 GGAATGGGTACAAAA GCGCATG-ACCTCTTCGTGCTGCCTT TGTGCAG AAAGCATCACGACGAGCTGCATGCGG ATACCGTGGCATTTG TERM 780 571578 - 571523 - g 74 -10.6 -3.2362 | gap 1, opp_overlap 571522 571524 571571, overlap 571522 GAATGGGTACAAAAG CGCATG-ACCTCTTCGTGCTGCCTT TGTGCAG AAAGCATCACGACGAGCTGCATGCG GATACCGTGGCATTT ECS88_0552 570676 - 571671 + | hypothetical protein ECS88_0553 571674 - 572060 + | putative Antitermination protein Q TERM 781 572099 - 572133 + F 76 -10.2 -3.35996 | opp_overlap 572102, overlap 572102 AATCATATTTTATTA TAACCTCCTGATGA TACCTGT TCATTGGGAGGTTA TTATGGATAAAAATG TERM 782 572693 - 572705 + G 74 -3.3 -5.01732 | opp_overlap 572693 572694, overlap 572694 TTCAACTTTGGACAA GGCTG CTA CAGCG TTTTTTGAGAGGCTT ECS88_0554 572109 - 572753 + | hypothetical protein TERM 783 572901 - 572886 - f 71 -8.2 -3.83323 | opp_overlap 572886 GCCACACAACTTAAA CCCGCC ACTG AGCGGG TTTTTTGTACCTGTA TERM 784 572886 - 572901 + F 91 -7.5 -5.29782 | opp_overlap 572886 GCCACACAACTTAAA CCCGC CACTGA GCGGG TTTTTTGTACCTGTA ECS88_0555 573032 - 573229 + | hypothetical protein TERM 785 573216 - 573233 + F 100 -9.9 -5.40464 | opp_overlap 573215 GCGGTTGTTACAGAC GCCTTCA GTCC TGAAGGC TTTTTATTTGTGGTG TERM 786 573569 - 573554 - g 73 -9 -3.6106 | overlap 573564 573565 GTCAATATCTGGAAA GTCAGC ATAA GCTGAC GAGGACTCGTCTGAC ECS88_0556 573364 - 574071 + | putative ARAC-type regulatory protein from phage origin TERM 787 574365 - 574380 + F 100 -8.2 -5.83822 | GACTTATTTTTCCCG GCTCGC TTTT GCGGGC TTTTTTTTAAATGTC TERM 788 574604 - 574621 + F 100 -12.7 -4.30719 | AGATACGCGGCTTTA GCCCCTC TCCG GAGGGGC TTTCTTGTGGGCAAA TERM 789 574658 - 574641 - f 100 -8.4 -5.40072 | TTGTGGGCAAAAAAA GCCCGA GTGGGT TCGGGC AACAGCATGAGATAT TERM 790 574714 - 574733 + F 90 -9.2 -4.66833 | opp_overlap 574714 AACCAGAATTCATAA GGCTGCGC AACT GCGCGGTC TTTTTCGAATTGCGG TERM 791 575360 - 575373 + G 71 -9.5 -3.52995 | overlap 575358 TTGTTGCCGTTTATT CCGGC GAAT GCCGG TATTCTTCTGGTTCC ECS88_0557 574841 - 576802 + | conserved hypothetical protein from phage origin TERM 792 576796 - 576784 - f 80 -10.5 -3.73068 | GGTGGAAGTGAACAA CGCGG ATG CCGCG GCATGATAAAAAAAG TERM 793 576824 - 576811 - f 100 -3.7 -5.67063 | overlap 576812 576813 GGCATGATAAAAAAA GGCCG CCAG CGGCA GGAATGGAAGCTGGC TERM 794 576823 - 576812 - f 70 -7.2 -3.99153 | overlap 576811 576813 GCATGATAAAAAAAG GCCG CCAG CGGC AGGAATGGAAGCTGG ECS88_0558 576939 - 577121 + | conserved hypothetical protein from phage origin ECS88_0559 576985 - 577428 + | conserved hypothetical protein from phage origin essD 577504 - 577719 + | putative phage lysis protein S; DLP12 prophage ECS88_0561 577721 - 578074 + | conserved hypothetical protein from phage origin ydfQ 578138 - 578671 + | putative membrane-associated lysozyme; Qin prophage TERM 795 578761 - 578795 + F 81 -10.8 -3.46647 | opp_overlap 578766, overlap 578766 TAAGTGAATAAAAGT AAAAACCCCGTTTGTT GGC ACCAAGCGGGGTTTTG TGTTTCCTGACTCCG TERM 796 578766 - 578790 + F 95 -10.7 -4.82128 | opp_overlap 578766, overlap 578761 GAATAAAAGTAAAAA CCCCGTTTGTT GGC ACCAAGCGGGG TTTTGTGTTTCCTGA TERM 797 578790 - 578766 - f 95 -8.5 -5.17786 | opp_overlap 578766 578761 GAATAAAAGTAAAAA CCCCGTTTGTT GGC ACCAAGCGGGG TTTTGTGTTTCCTGA ECS88_0563 578795 - 578968 + | conserved hypothetical protein from phage origin ECS88_0564 578970 - 579407 + | putative endopeptidase (Protein gp15) TERM 798 579440 - 579456 + F 100 -11.5 -4.62783 | opp_overlap 579440 579437 AAGTCAATTTAATGA GCCTCGC GAT GCGGGGC TTTTTGCAATAAATG TERM 799 579480 - 579470 - f 70 -6.8 -4.15044 | opp_overlap 579468 579470, overlap 579471 GCTTTTTGCAATAAA TGCG TAC CGCA ACGCATGTTTTTTAC TERM 800 579821 - 579790 - g 76 -9.6 -3.74238 | opp_overlap 579799 GGAAAGAATCTCAAA TTTTACATCCCTCA CAAT CGAGGTATGTAAAA ACCAGCAAGGCACGA ECS88_0565 579609 - 580130 + | conserved hypothetical protein from phage origin TERM 801 580204 - 580221 + F 70 -9.1 -3.21099 | opp_overlap 580204 GCTATCCATTACAAA GCCCATC TACG GGTGGGC TTGATAATGAAACCG ECS88_0566 580821 - 580979 + | conserved hypothetical protein from phage origin ECS88_0568 581468 - 581313 - | hypothetical protein TERM 802 581453 - 581467 + g 70 -5.8 -4.29396 | opp_overlap 581453 TAAACCTTATATAGA TGATAA TCA TTATCA TTTTCGTGGGTCCTT TERM 803 581508 - 581521 + H 71 -3.7 -4.7889 | overlap 581507 CGACCGGTTACGGGG CGGCG ACCT CGCGG TTTTTCACTATTTAT TERM 804 581667 - 581613 - H 87 -11.5 -3.57462 | opp_overlap 581613 TATTGCATCCGTAAA GGTCCGACATGAAAGTGTCCGAAAA TGCCT TTTTCTGGCGTTTTCATGTCGGGCC TTGTATTTGATAATG TERM 805 581613 - 581667 + H 100 -20.3 -3.87323 | opp_overlap 581613 TATTGCATCCGTAAA GGTCCGACATGAAAGTGTCCGAAAA TGCCT TTTTCTGGCGTTTTCATGTCGGGCC TTGTATTTGATAATG TERM 806 581981 - 581966 - g 72 -6.1 -4.3739 | TACCGGCTCACAAAA GCGCA GGCAGA TGCGC AGGAACTGAAAAATG ECS88_0569 581693 - 582241 + | Terminase small subunit (Gp1) TERM 807 582643 - 582658 + F 71 -4 -4.74132 | gap 1, opp_overlap 582643 AACACCGCGATAATA CGC-TCA CCC TGAAGCG TTTTTCCTCCGGTGT TERM 808 582904 - 582888 - f 71 -4.4 -4.70659 | gap 1 TGCCAGATCGAAAAA GCCG-CT AACG AGTCGGC ACACTTCATGCGTTT TERM 809 582966 - 582982 + F 71 -7.9 -3.77087 | CAGTATCTGAAATTT GGCGATG ATG CCTCGCC TTTCGGTCTTAAGTG TERM 810 583122 - 583103 - f 72 -7.1 -4.07568 | GTGGTTCTGTGAAAA CACGGGC ATGTGG ACCCGTG ACGGCCTGATGTTTT TERM 811 583573 - 583555 - f 81 -2.3 -5.5112 | overlap 583557 GCGATCAACAAAAAA TACCGCC ATGCA GACGGAA CCGAAATGACCATTT TERM 812 583738 - 583724 - f 89 -8.5 -4.63527 | TCACCATGCCAAAAA CCCGC AATCA GCGGG GCGTGTATCTGTGTG TERM 813 583846 - 583864 + F 74 -3.8 -5.00616 | overlap 583848 TCGTATGCTATCCGT TTTCCTGA TGA TCCGGAGA TTTTTTCGCAGACAG ECS88_0572 584123 - 584329 + | Head stabilization protein (Head protein GP3) TERM 814 584742 - 584710 - gf 93 -10.6 -4.41494 | opp_overlap 584707, overlap 584712 GACGTGGAAGGAAAA CGCACGTTCACGGA ATTTA TCCGTGAAGGTGTG GGCGTTCATGCGTTT TERM 815 584740 - 584712 - gf 79 -11.8 -2.54166 | opp_overlap 584707, overlap 584710 CGTGGAAGGAAAACG CACGTTCACGGA ATTTA TCCGTGAAGGTG TGGGCGTTCATGCGT TERM 816 585839 - 585820 - gf 73 -4.9 -4.59773 | overlap 585821 GCTGAGCGGCAAAAA GCCGGAC TCTCAC GTCCGGT GTGGATAGAGCAGGC ECS88_0573 584296 - 585918 + | Portal protein (Head protein Gp4) TERM 817 585968 - 585983 + G 91 -7.5 -5.07652 | CCGCTGCTTCTGGAG CCCGC CTATGC GCGGG TTTTCTTTTGCGCGC ECS88_0574 585908 - 587413 + | Head-tail preconnector protein GP5 [Contains: Scaffold protein GP6 (Head protein GP6)] TERM 818 587416 - 587395 - f 71 -9.5 -3.08046 | gap 1, overlap 587394 587415 TGCGGACGTGAAAAT GCT-CATGGC CAT GCCATGAAGC CAGTGCTGACCATCA TERM 819 587764 - 587749 - g 77 -3.2 -5.1244 | opp_overlap 587757, overlap 587750 GGATGAACACAAAAA GGCCAA CGCC TTTGCC GGCAGTGCCCTGAGT ECS88_0575 587450 - 587797 + | Head decoration protein (Head protein GPshp) TERM 820 587802 - 587830 + F 79 -9 -3.91897 | gap 1, overlap 587804 CGCTGCCGTAACACG TTA-TCAGGCCAC CGCG GTGGCCTGACTGA TTTCTGAATGAAAGG TERM 821 587804 - 587827 + F 76 -11 -3.02745 | overlap 587802 CTGCCGTAACACGTT ATCAGGCCAC CGCG GTGGCCTGAC TGATTTCTGAATGAA TERM 822 588007 - 587997 - g 88 -8.2 -4.652 | opp_overlap 587997 587999, overlap 587988 587998 587999 AAATTACCGGAAAAA CGCC GGT GGCG GCCTATGTCTCCCCG ECS88_0576 587855 - 588883 + | Major head protein (Head protein gp7) TERM 823 588889 - 588914 + GF 100 -9.7 -5.00616 | gap 1, opp_overlap 588903 588904, overlap 588892 588904 GGTGAAATAATCCGT GA-GCGGGGGCG AAA TGCCCCCGTGTC TTTTTTCACAGGGGG TERM 824 588892 - 588910 + GF 100 -13.8 -3.66166 | opp_overlap 588903 588904, overlap 588889 588904 GAAATAATCCGTGAG CGGGGGCG AAA TGCCCCCG TGTCTTTTTTCACAG ECS88_0577 588887 - 589309 + | conserved hypothetical protein from phage origin ECS88_0578 589266 - 589655 + | Tail attachment protein (Head protein gp8) ECS88_0579 589601 - 590245 + | Minor tail protein Z (GpZ) TERM 825 590295 - 590329 + G 100 -10.7 -4.72272 | gap 1, opp_overlap 590297, overlap 590298 ACTGGAGAAGCATGA CACCGGGGCGACGCTT TTTG ATG-GTCGCCCCGCTG TTTTTGATGAGGAAG TERM 826 590298 - 590326 + G 72 -11 -2.98472 | gap 1, opp_overlap 590297, overlap 590295 GGAGAAGCATGACAC CGGGGCGACGCTT TTTG ATG-GTCGCCCCG CTGTTTTTGATGAGG TERM 827 590351 - 590362 + G 70 -7.2 -4.03234 | ATGAGGAAGATTTTC CGGC AATT GCCG TTTATCTCACCAGCG ECS88_0580 590242 - 590637 + | Minor tail protein U TERM 828 591294 - 591257 - g 79 -2.6 -5.18371 | opp_overlap 591286, overlap 591258 591259 GCGGATAAAACAAAA GCCACCGTGTCGGTCA GTGGTA TGACCATCACCGTGAA CGGCGTTGCTGCAGG ECS88_0581 590615 - 591385 + | Major tail protein V TERM 829 591435 - 591449 + G 81 -10 -3.91144 | opp_overlap 591433 591430 591434 CATTTGAACATAACG GCGTGA CCG TCACGC TTTCTGAACTGTCAG ECS88_0582 591401 - 591823 + | Minor tail protein G TERM 830 591969 - 591996 + G 90 -9.2 -4.58395 | gap 1 GGATATGCACTTTTC CGGGCTGACGTAC ACC GTGC-TCAGCCTG TTTTTCAGCGATCCG ECS88_0583 591805 - 592239 + | Minor tail protein T TERM 831 592375 - 592350 - g 91 -5.3 -5.44119 | overlap 592369 GTGATGCGAAAAAAA CAGCGGCAGTC GTTG AACAGTCGCTG AGCCGACAGGCGCTG TERM 832 593605 - 593590 - g 81 -6.8 -4.60041 | AGCGACGCTGAAAAA GCCGAA ACAG TCCGGC GTGAAGGTGTCTGCG TERM 833 594204 - 594189 - g 70 -4 -4.65895 | gap 1, opp_overlap 594189 594189 TGTCGCAGGTAAAAA GTGCTGC CAC GCAG-AC CTTTGATGGTATTGC ECS88_0584 592232 - 594793 + | Minor tail protein precursor H ECS88_0586 594790 - 595119 + | Minor tail protein M TERM 834 595409 - 595440 + GF 70 -9.4 -2.91429 | gap 1, opp_overlap 595400, overlap 595437 GGAAGACCTGCAGAG TCTGGTGG-GGGCCA CGG TGGTCCGCCGCCGGG TGTATGCCCGTTTTC TERM 835 595437 - 595450 + GF 72 -5.9 -4.42653 | overlap 595409 ACGGTGGTCCGCCGC CGGGT GTAT GCCCG TTTTCTGGATGCGGT ECS88_0587 595119 - 595817 + | Minor tail protein L TERM 836 596100 - 596090 - gf 71 -2.4 -4.96848 | GGCTGCAGATAAAAA GCGC ACT GCCC TGGTGGCTGGTCTGC TERM 837 596318 - 596307 - gf 72 -7.2 -4.08692 | opp_overlap 596295 596317 CAACCTGGCGGAAAA CGGC TTTT GCCG GGTGTCTCCGTCCTC ECS88_0588 595567 - 596571 + | tail fiber component K ECS88_0589 596469 - 597149 + | Tail assembly protein I TERM 838 597195 - 597164 - f 100 -5 -6.04419 | AAAAGAATAAAAAAA TCCCGCAGTGATCG CGGA CAGGAACTGCGGGA GAGTTACGAAGATTA TERM 839 597363 - 597386 + F 100 -16.8 -4.33928 | opp_overlap 597363 GGGCATGAAAGAAAA CCCCGGTATC TGCT GATACCGGGG TTTCTCTTTAGCATG TERM 840 597386 - 597363 - f 100 -16.8 -4.93877 | opp_overlap 597363 GGGCATGAAAGAAAA CCCCGGTATC TGCT GATACCGGGG TTTCTCTTTAGCATG TERM 841 600313 - 600300 - g 71 -2.3 -4.88736 | overlap 600301 GACCACGGATAAAAA GCTGG GTGA CCAGG CCGTGACCATACAGC ECS88_0590 597493 - 601185 + | Host specificity protein J TERM 842 601205 - 601222 + F 100 -9.1 -5.4505 | opp_overlap 601196 TATAACCCCAATACG GGCGCCA GAAA TGGTGCC TTTTTTATTGCAGAA ECS88_0591 601253 - 601852 + | Putative Lom-like outer membrane protein of prophage TERM 843 601959 - 601982 + F 100 -10.2 -5.84381 | TTACACTGTCCTGAA GCCCGTGGCG TCAC TGCTGCGGGC TTTTTTTATTGGTGG TERM 844 603531 - 603550 + G 71 -2.8 -4.84311 | overlap 603518 603514 ACCCCTCAGGTTGAG GATGGTTC GTGT GTATCATC TTTTATTATATCAGG ECS88_0592 602004 - 604064 + | hypothetical protein ECS88_0593 604061 - 604339 + | hypothetical protein TERM 845 604319 - 604333 + F 74 -7.8 -4.11216 | opp_overlap 604313, overlap 604289 GTTACACCAGAGCGC CCGCTC AGG GAGTGG TTTTAAGGATAGCAG ECS88_0594 604349 - 604642 + | conserved hypothetical protein from phage origin TERM 846 604785 - 604837 + T 87 -7.8 -5.08824 | gap 1, overlap 604787 604795 TCAGGGAGTAATCAT TGGGATTATGCCGCAGCACG-TCTT AAGC AAGAACGTGCTGCGGTTGGATGCTA TTTTTTCCCTGAAGC TERM 847 604787 - 604835 + T 76 -8.2 -4.17608 | gap 1, overlap 604785 604795 AGGGAGTAATCATTG GGATTATGCCGCAGCACG-TCTT AAGC AAGAACGTGCTGCGGTTGGATGC TATTTTTTCCCTGAA TERM 848 604795 - 604827 + T 100 -17.2 -3.16564 | gap 1, overlap 604787 604785 ATCATTGGGATTATG CCGCAGCACG-TCTT AAGC AAGAACGTGCTGCGG TTGGATGCTATTTTT ybcY 605419 - 604835 - | putative AdoMet-dependent methyltransferase; DLP12 prophage TERM 849 606037 - 605985 - R 79 -2.8 -5.3798 | gap 1, opp_overlap 605985, overlap 605987 605991 605993 CAAGAATAACAAAAA TATG-AATATGCTCCCAATGCAATA TATG TTTTGCATTGGGAGCAAATAGCGGA ATATTTTGAAATTAT TERM 850 606030 - 605991 - R 100 -15.2 -3.66615 | opp_overlap 605985, overlap 605987 605985 605993 TAACAAAAATATGAA TATGCTCCCAATGCAATA TATG TTTTGCATTGGGAGCAAA TAGCGGAATATTTTG TERM 851 606028 - 605993 - R 100 -17.8 -3.38068 | opp_overlap 605985, overlap 605991 605987 605985 ACAAAAATATGAATA TGCTCCCAATGCAATA TATG TTTTGCATTGGGAGCA AATAGCGGAATATTT ECS88_0596 607533 - 606049 - | putative exported protein; putative protease TERM 852 607456 - 607478 + g 81 -12.8 -3.21416 | CATACAGGATTGCCA CTGTATCTGC TGG GCAGATACGG TTACTGGTAGAAGTA TERM 853 607701 - 607671 - R 82 -8.2 -4.46233 | overlap 607672 GTAACTGTAAACAAA TTCCCCGGGGTTAT ACA ATACCACCGGGGAG AAAATCTGGTTAACT TERM 854 607700 - 607672 - R 83 -11.7 -3.27017 | overlap 607671 TAACTGTAAACAAAT TCCCCGGGGTTAT ACA ATACCACCGGGGA GAAAATCTGGTTAAC ompT 608673 - 607720 - | outer membrane protease VII (outer membrane protein 3b); DLP12 prophage tfaQ 609782 - 610138 + | Tail fiber assembly protein TERM 855 610143 - 610195 + T 84 -7 -5.08824 | gap 1, overlap 610145 610148 TCAGAGAGTAATCAT TGGGATTATGCCGCAGCACG-TCGT GCGC AAGAACGTGCTGCGGCTGGATGCTA TTTTTTCCCTGAAGC TERM 856 610145 - 610193 + T 74 -7.4 -4.17608 | gap 1, overlap 610143 610148 AGAGAGTAATCATTG GGATTATGCCGCAGCACG-TCGT GCGC AAGAACGTGCTGCGGCTGGATGC TATTTTTTCCCTGAA ybcY 610777 - 610193 - | putative AdoMet-dependent methyltransferase; DLP12 prophage TERM 857 610292 - 610318 + g 76 -3.8 -4.93968 | overlap 610306 TGTTAAGCCTTCTTC GGAATCTTTT GTGTTTG AAAAGATGCC TTTTTGATTGTAAAT TERM 858 610858 - 610868 + r 74 -4 -5.01553 | overlap 610850 TTTTCATTAGTTTCA CTAT GTT ATAG TTTTATTTGTGAATT TERM 859 611074 - 611044 - R 82 -8.2 -4.46233 | overlap 611012 611045 TTAACGGTAAACAAA TTCCCCGGGGCTAT ACA ATACCACCGGGGAG AAAATCTATTTAACG TERM 860 611073 - 611045 - R 83 -11.7 -3.27017 | overlap 611012 611044 TAACGGTAAACAAAT TCCCCGGGGCTAT ACA ATACCACCGGGGA GAAAATCTATTTAAC ompT 612046 - 611093 - | outer membrane protease VII (outer membrane protein 3b); DLP12 prophage TERM 861 612369 - 612388 + r 73 -6.4 -4.35581 | opp_overlap 612368 612364 CTGAGACACATAAGG CCTCGCAA TGGC TTGCAAGG TTTTACATATTTTGA TERM 862 612625 - 612615 - R 76 -5.4 -4.78029 | CGAATAAAATGAAAA CAGA AAT TCTG CTAAACAATTCATCT TERM 863 612694 - 612675 - R 76 -7.9 -4.24432 | opp_overlap 612675 612674 AAAGTGAAAAGGAAA GGAGCAA ACTAAG TTGCTCC CTTTAATCATTAATA ybcH 613594 - 612704 - | hypothetical protein nfrA 616567 - 613595 - | bacteriophage N4 receptor, outer membrane subunit TERM 864 615987 - 616011 + g 71 -2.9 -4.8622 | gap 1 TTCAGGTAGATTGCC CGTTGC-AGC AGATCG GTTCGCAACG TTTTTCCTTCCGGCG TERM 865 616452 - 616437 - G 79 -4 -5.05116 | gap 1, opp_overlap 616450, overlap 616439 GGATAAATAACAAAA TG-GCGA TAA TCGCTCA GCCCCAGCTCTTCTG nfrB 618791 - 616554 - | bacteriophage N4 receptor, inner membrane subunit TERM 866 617499 - 617471 - G 78 -7.4 -4.36914 | gap 1 GGTTGCCCCAGAAAA GACGCAGG-ACAG ATAG CAGCCCCTGCGTC AGGCCGTAGTAGCCA TERM 867 617679 - 617663 - G 72 -5.1 -4.44797 | overlap 617655 CCAGCAACAGCAAAA GCTGG ATCATCA CCAGC ATCGCGAGGAAGCTG TERM 868 618098 - 618070 - G 71 -9.6 -3.53012 | gap 1, opp_overlap 618097, overlap 618072 GCGCGGCGGCTGAAA CAGGTGCCGA-CG CCTG CGCTGGGCACCTG TCCGGCGAGGGCTTC cusS 620383 - 618941 - | sensory histidine kinase in two-component regulatory system with CusR, senses copper ions TERM 869 619319 - 619301 - G 70 -5.9 -4.15044 | opp_overlap 619302, overlap 619302 CTCGTCGCCAACAAA CCGCAGC TCCAC GCCGCGA TCTTCTGCTAACGCC TERM 870 620318 - 620303 - G 77 -6 -4.70879 | overlap 620294 TGCAAAGGCGAAAAA CGCCGC GATG GTGGCG AGGCTGATAAAAAAG cusR 621056 - 620373 - | DNA-binding response regulator in two-component regulatory system with CusS TERM 871 621118 - 621139 + H 74 -6.7 -4.34402 | opp_overlap 621126, overlap 621117 ATGGCAATCGCTTAT TGGCAAAAT GACA ATTTTGTCA TTTTCCTGTCACCGG TERM 872 622106 - 622121 + G 81 -6.8 -4.65838 | overlap 622117 TAATGCCAATATTGG TGCTGC GCGT GCGGCA TTTTTCCCGTCTATC TERM 873 622579 - 622567 - g 71 -10.5 -2.8806 | AAATTTCTTTATATA CCGCC TTA GGCGG CGGTTGGCAGCAATA cusC 621213 - 622595 + | copper/silver efflux system, outer membrane component cusF 622619 - 622951 + | periplasmic copper-binding protein cusB 622967 - 624190 + | copper/silver efflux system, membrane fusion protein TERM 874 624227 - 624239 + G 70 -4.8 -4.49311 | overlap 624217 GGATTATTCGTCGCT CGGT GGCGA ACCG TTTTCTGGTGCTGAT TERM 875 626002 - 625976 - g 76 -3.6 -5.02074 | GCATGCTGCAAAAAA CCGACAAGCTGA TTA TGAGCGTACCGG AAGTGGCGCGGGTAT cusA 624202 - 627345 + | copper/silver efflux system, membrane component TERM 876 627678 - 627713 + G 84 -11.2 -3.71873 | gap 1, opp_overlap 627689 CAGCTCGGCGAGATG GTGGTCGAA-GAGCCGG TAT CCGGTTCATTTGCCCAC TTTGCCTATAAATAC pheP 627447 - 628823 + | phenylalanine transporter TERM 877 628835 - 628824 - T 70 -7.2 -3.90744 | CTGCGTCGGAAATAA GGCG TTCA CGCC GCATCCGACAAAATG TERM 878 628896 - 628868 - T 85 -11 -3.72051 | opp_overlap 628869, overlap 628869 GTCAACAATCTGAAA GCCGCTCTCACC CATTC GATGAGAGCGGT TTTTTTAATTACTGC TERM 879 628869 - 628895 + T 100 -12.3 -5.65513 | opp_overlap 628868 628869 TCAACAATCTGAAAG CCGCTCTCACC CATTC GATGAGAGCGG TTTTTTTAATTACTG TERM 880 628895 - 628869 - T 87 -14.5 -2.82749 | opp_overlap 628869, overlap 628868 TCAACAATCTGAAAG CCGCTCTCACC CATTC GATGAGAGCGG TTTTTTTAATTACTG ybdG 630152 - 628905 - | putative membrane protein; putative channel TERM 881 630252 - 630231 - R 87 -11.5 -3.61103 | overlap 630233 GAATCTGAGGGGAAA TAGCCGGGC AGAT GCCCGGCAA GGGAGAATTACACTT TERM 882 630250 - 630233 - R 100 -14.1 -3.38224 | overlap 630231 ATCTGAGGGGAAATA GCCGGGC AGAT GCCCGGC AAGGGAGAATTACAC nfnB 630913 - 630260 - | dihydropteridine reductase, NAD(P)H-dependent, oxygen-insensitive ybdF 631375 - 630992 - | hypothetical protein TERM 883 631152 - 631174 + g 74 -9.9 -3.52909 | overlap 631150 TTTTTATTCATGTGA TACCCAGGC TTGAT GCTTGGGTA TATTTGCTGATTTAG ybdJ 631688 - 631440 - | conserved hypothetical protein; putative inner membrane protein ybdK 632872 - 631754 - | gamma-glutamyl:cysteine ligase TERM 884 632444 - 632431 - G 82 -8.1 -4.49556 | CGTGCAGCAAATAAA TGGCG TCAT CGCCA CTGGCGCAGCCAACA TERM 885 633263 - 633231 - H 85 -11.4 -3.45571 | gap 1, opp_overlap 633259, overlap 633225 GTCTGGAAAGATGAA GCCCCAGGA-CGATA TTTC TATCAACCCTGGGGC TACCTACCCAAACCT hokE 633326 - 633478 + | toxic polypeptide, small TERM 886 633479 - 633510 + T 74 -10.8 -2.59564 | opp_overlap 633478, overlap 633479 GAACCGAAGAAGTAG CCGTTGTGCGGGGA GCAA TCCCCGCATATCCG GTTGTCAGGTCAGGG TERM 887 633479 - 633511 + T 80 -10.6 -3.32963 | gap 1, opp_overlap 633478, overlap 633479 GAACCGAAGAAGTAG CC-GTTGTGCGGGGA GCAA TCCCCGCATATCCGG TTGTCAGGTCAGGGT entD 634229 - 633600 - | phosphopantetheinyltransferase component of enterobactin synthase multienzyme complex TERM 888 633943 - 633926 - G 73 -9.1 -3.59979 | TTGGTTGACGGGAAA CCACGGC TAAT GCCGTAG TCCCACAGTGACTAA fepA 636635 - 634395 - | iron-enterobactin outer membrane transporter TERM 889 634758 - 634789 + g 77 -2.9 -5.11836 | gap 1, overlap 634761 TGAGTTCAACGTATA CTCCGGGATGATCG ACAAA CGGTCG-CCCGTGG TTTTGTTTTCACTCT TERM 890 635960 - 635977 + g 75 -6.9 -4.4017 | GGCCCTGGTTGATAT CCCACGC GTCA GCCTGGG TTTTGTCGAGGTTGC TERM 891 636440 - 636453 + g 70 -3.7 -4.64657 | TGATCTCCGATACAT CGCGG GCAA CCGGG TTTTTGCGGATTTCA TERM 892 637143 - 637153 + G 72 -6.8 -4.2704 | opp_overlap 637129, overlap 637140 ATGCCAACTGGCGTG GCAG CTA CTGC TTTATTCCTACTGAA fes 636956 - 638080 + | enterobactin/ferric enterobactin esterase ybdZ 638083 - 638301 + | hypothetical protein TERM 893 639716 - 639700 - g 95 -10.1 -4.64144 | overlap 639691 AACAAGCGGCAAAAA CACCGGA TGC TCCGGCG CTGGCAGATGCGCGT TERM 894 640375 - 640394 + G 76 -7.8 -4.2123 | opp_overlap 640363 CGACCACGCACTTTG TGCCGTCG ATGC TGGCGGCA TTTGTTGCATCGCTG TERM 895 641514 - 641524 + G 78 -8.2 -4.18762 | CTGTTTTGTTTCCAT CCGG CAT CCGG TTTTGCCTGGCAGTT entF 638298 - 642179 + | enterobactin synthase multienzyme complex component, ATP-dependent TERM 896 642192 - 642230 + F 71 -9.2 -3.37482 | opp_overlap 642181 642198, overlap 642192 642194 642198 TAAATTTATATTATC TATAAACCCATAATTA CAGAAAA TAATTATGGGTTTATC ATTTGTTTAATTTAT TERM 897 642192 - 642231 + F 82 -7.6 -4.65182 | gap 1, opp_overlap 642181 642198, overlap 642192 642194 642198 TAAATTTATATTATC T-ATAAACCCATAATTA CAGAAAA TAATTATGGGTTTATCA TTTGTTTAATTTATA TERM 898 642194 - 642228 + F 83 -11.8 -3.23149 | opp_overlap 642181 642198, overlap 642192 642192 642198 AATTTATATTATCTA TAAACCCATAATTA CAGAAAA TAATTATGGGTTTA TCATTTGTTTAATTT TERM 899 642224 - 642198 - f 79 -8.9 -3.94409 | opp_overlap 642194 642192 642192 642198 TATATTATCTATAAA CCCATAATTAC AGAAA ATAATTATGGG TTTATCATTTGTTTA TERM 900 642198 - 642224 + F 76 -8.2 -4.23391 | opp_overlap 642198, overlap 642194 642192 642192 TATATTATCTATAAA CCCATAATTA CAGAAAA TAATTATGGG TTTATCATTTGTTTA fepE 642395 - 643528 + | regulator of length of O-antigen component of lipopolysaccharide chains fepC 644340 - 643525 - | iron-enterobactin transporter subunit ; ATP-binding component of ABC superfamily fepG 645329 - 644337 - | iron-enterobactin transporter subunit ; membrane component of ABC superfamily TERM 901 645121 - 645095 - G 95 -10 -4.67353 | overlap 645096 TCAGCGACTGAAAAA TCGCGCCGCTGA CGC CCAGCGCCGCGC CAATCAACAGCGCCA TERM 902 645120 - 645096 - G 89 -13.5 -3.3993 | overlap 645095 CAGCGACTGAAAAAT CGCGCCGCTGA CGC CCAGCGCCGCG CCAATCAACAGCGCC fepD 646330 - 645326 - | iron-enterobactin transporter subunit ; membrane component of ABC superfamily TERM 903 647302 - 647281 - g 70 -5.9 -4.17023 | gap 1, opp_overlap 647281 TTAACCAGTGGAAAA CTGGCGCATA GCG TACG-GCCAG GTCTGTTGATGTTGC ybdA 646441 - 647691 + | enterobactin exporter fepB 648651 - 647695 - | iron-enterobactin transporter subunit ; periplasmic-binding component of ABC superfamily TERM 904 648315 - 648360 + g 74 -8.4 -3.89435 | gap 2, overlap 648306 648356 GATCCGGCATTTGCG CGGCAACGGCTTCTGCACTCGG TTCG CCGA-TATAG-AGCCGTTGCAG TTTGCGTTCTTTCGC TERM 905 648411 - 648421 + g 74 -8.2 -3.94634 | AAAAGCCCTGGTCAT CCGC GAC GCGG TTATTTGGCGTGGTC entC 648840 - 650015 + | isochorismate synthase 1 TERM 906 651235 - 651250 + G 71 -3.2 -4.87626 | AGCACAATGCCAGCG CCTTTG ATGC CAACGG TTTTTACTGTTCCGG TERM 907 651620 - 651600 - g 70 -3.9 -4.72201 | overlap 651603 GTCGATAAAAAACAA TTACGTCAG TGG CTGGCGTCA CGCACATCAGCCTGA entE 650025 - 651635 + | 2,3-dihydroxybenzoate-AMP ligase component of enterobactin synthase multienzyme complex entB 651649 - 652506 + | isochorismatase entA 652506 - 653252 + | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase ybdB 653255 - 653668 + | putative esterase TERM 908 655321 - 655333 + G 72 -6.9 -4.19177 | overlap 655320 GGTGGATGCGGGTAC GCGTG CTG CGCGC TTTATGTTGCAGGAT cstA 653849 - 655954 + | carbon starvation protein ybdD 656067 - 656264 + | hypothetical protein ybdH 657362 - 656274 - | putative oxidoreductase TERM 909 656580 - 656570 - G 70 -6.8 -4.07568 | opp_overlap 656570, overlap 656550 656578 CGGTTTGTGGCAAAA CGGT AAG ACCG TTATGCACGGCATGG TERM 910 658041 - 658069 + r 74 -3.8 -4.98255 | gap 1, overlap 658040 GACTGATTTCGCCGC TCT-GTGGCAGGC GATC GCCGGGCACGAGA TTTTTGTCATTAGCG ibrB 659271 - 658642 - | immunoglobulin-binding regulator TERM 911 658669 - 658703 + gr 70 -7.2 -3.90588 | opp_overlap 658669 658673 CCAGGCGCGGGAAAA TTGACGGTCGGCAA ACAACTC TTGCAGGCCGTTAA TTTGCTTCAGGCGTA ibrA 660464 - 659244 - | immunoglobulin-binding regulator TERM 912 660484 - 660472 - R 74 -5.5 -4.73448 | ATAGACATCTAAAAA CGCTC TCT GAACG TTACGGGGTGACTCG ybdO 661549 - 660611 - | putative DNA-binding transcriptional regulator, LysR-type dsbG 662464 - 661718 - | periplasmic disulfide isomerase/thiol-disulphide oxidase TERM 913 662911 - 662889 - g 88 -8.4 -4.67353 | CCAGGCATTCAAAAA CGGCGAATTC ATC GAAATCACCG AAAAAGATACCGAAG ahpC 662836 - 663399 + | alkyl hydroperoxide reductase, C22 subunit TERM 914 663463 - 663482 + F 100 -13.6 -4.63218 | AATTCACCTAATTCT TCGGGTGC TGCG GCACCCGA TTTTCTTCCCCGCAC TERM 915 663614 - 663597 - g 72 -9.9 -3.41195 | AATATGAAAACTCAA CTCAAGG CTTA CCTTGAG AAATTGACCAAGCCT ahpF 663570 - 665135 + | alkyl hydroperoxide reductase, F52a subunit, FAD/NAD(P)-binding TERM 916 665166 - 665189 + T 100 -13.1 -5.5074 | opp_overlap 665181 ACCTGTAATTGCTTA GCCGCCGGG GTCAAA CCTGGCGGC TTTTTTATTGCATTA TERM 917 665236 - 665209 - T 100 -11.2 -4.7373 | overlap 665181 TTATTGCATTAAAAA GCCCTGCAGGGA TGGC TCCGGGCAGGGC GGGAGACTTATTCTG uspG 665684 - 665256 - | universal stress protein UP12 ECS88_0650 665897 - 665808 - | hypothetical protein TERM 918 666005 - 665986 - R 89 -12.2 -3.60805 | ATATTTGAGCGGAAA GAGGATGC GAGT GCATCCTC TGGGCAAAGCGAGTT rnk 666450 - 666040 - | regulator of nucleoside diphosphate kinase TERM 919 666530 - 666508 - R 100 -12.7 -5.11836 | opp_overlap 666508 ATACCCAAAAGAAAA CCCTCACCG TCAGG CGGCGAGGG TTTAACTCACATGAT TERM 920 666508 - 666530 + r 87 -11.2 -3.6608 | opp_overlap 666508 ATACCCAAAAGAAAA CCCTCACCGT CAG GCGGCGAGGG TTTAACTCACATGAT TERM 921 666579 - 666613 + r 72 -8.6 -3.6164 | overlap 666565 CTCTTTGAAGTGATT TGCGTCACATTCAGGG AAT TCCTCAATGTAGCGCA TTATGTATAAATCTT rna 667486 - 666680 - | ribonuclease I TERM 922 667464 - 667450 - G 77 -8.5 -4.13872 | overlap 667441 667460 667461 AGGGAAGCAGAGAAA CCGCG AGCAA CGCGG CGTTACGCCAGAATG TERM 923 667534 - 667575 + r 76 -7.9 -4.19371 | opp_overlap 667541, overlap 667537 TTATCTATTAAATCA TAAAAAAGCCCGCCAGGTG GGCT TACCTGGCGGGCGTGATGA TTTATTCAGCGTTTG TERM 924 667537 - 667572 + r 71 -9.6 -3.10512 | opp_overlap 667541, overlap 667534 TCTATTAAATCATAA AAAAGCCCGCCAGGTG GGCT TACCTGGCGGGCGTGA TGATTTATTCAGCGT TERM 925 667568 - 667541 - R 100 -18.5 -5.42265 | opp_overlap 667537 667534 TTAAATCATAAAAAA GCCCGCCAGGT GGGCTT ACCTGGCGGGC GTGATGATTTATTCA citT 669063 - 667600 - | citrate:succinate antiporter TERM 926 668581 - 668565 - G 77 -6.5 -4.64598 | opp_overlap 668571, overlap 668536 668566 TAATGACCGGAAAAA CCGTACC CCC GGTACGC GCGGTGTTGGACGGT TERM 927 668580 - 668566 - G 72 -10 -3.38036 | opp_overlap 668571, overlap 668536 668565 AATGACCGGAAAAAC CGTACC CCC GGTACG CGCGGTGTTGGACGG citG 669992 - 669114 - | triphosphoribosyl-dephospho-CoA transferase citX 670518 - 669967 - | apo-citrate lyase phosphoribosyl-dephospho-CoA transferase citF 672054 - 670522 - | citrate lyase, citrate-ACP transferase (alpha) subunit citE 672973 - 672065 - | citrate lyase, citryl-ACP lyase (beta) subunit citD 673266 - 672970 - | citrate lyase, acyl carrier (gamma) subunit citC 674339 - 673281 - | citrate lyase synthetase TERM 928 674025 - 674014 - G 77 -7.2 -4.58395 | opp_overlap 674021, overlap 674016 GTCAGCGTGGAAAAA CCGC ACTG GCGG AACAGCGCCTCGTAT TERM 929 674273 - 674287 + g 100 -2.7 -6.14618 | overlap 674274 TTTCATGCAGGAATT GGGCG ATTTC CGCCA TTTTTTTATTTTCTG TERM 930 674274 - 674286 + g 70 -6.2 -4.25111 | overlap 674273 TTCATGCAGGAATTG GGCG ATTTC CGCC ATTTTTTTATTTTCT TERM 931 674367 - 674414 + H 86 -7.3 -5.13343 | gap 1, overlap 674368 CCTGAAGGTGCATGT TGTTATCGATTTGCAACGAATG TTGTT CAAT-GTTGCAAATTGATAACC TTTTATTTTCACTTG TERM 932 674368 - 674413 + H 83 -10.8 -3.66379 | gap 1, overlap 674367 CTGAAGGTGCATGTT GTTATCGATTTGCAACGAATG TTGTT CAAT-GTTGCAAATTGATAAC CTTTTATTTTCACTT TERM 933 675900 - 675912 + GH 71 -3.3 -4.7373 | TTTGCCGATCGCCAG GTGGC GGG GCTGC TTTTTGGTAAAGTGC citA 674718 - 676376 + | sensory histidine kinase in two-component regulatory system with citB citB 676345 - 677025 + | DNA-binding response regulator in two-component regulatory system with citA TERM 934 677028 - 677064 + T 76 -8.7 -3.94746 | opp_overlap 677035 677047, overlap 677030 677031 677034 677035 CCACAGTGGGTGACA TGATAAAGCCGGAGGAA ACT TGCCTCCGGCATTACTA TTTACTTGCCTGTGA TERM 935 677030 - 677062 + T 73 -9.1 -3.56006 | opp_overlap 677035 677047, overlap 677028 677031 677034 677035 ACAGTGGGTGACATG ATAAAGCCGGAGGAA ACT TGCCTCCGGCATTAC TATTTACTTGCCTGT TERM 936 677031 - 677061 + T 82 -12.6 -2.72881 | opp_overlap 677035 677047, overlap 677030 677028 677034 677035 CAGTGGGTGACATGA TAAAGCCGGAGGAA ACT TGCCTCCGGCATTA CTATTTACTTGCCTG TERM 937 677034 - 677058 + T 75 -9.9 -3.50456 | opp_overlap 677035 677047, overlap 677031 677030 677028 677035 TGGGTGACATGATAA AGCCGGAGGAA ACT TGCCTCCGGCA TTACTATTTACTTGC TERM 938 677035 - 677057 + T 85 -13.4 -2.6955 | opp_overlap 677035 677047, overlap 677034 677031 677030 677028 GGGTGACATGATAAA GCCGGAGGAA ACT TGCCTCCGGC ATTACTATTTACTTG TERM 939 677057 - 677035 - T 100 -13.4 -4.0162 | opp_overlap 677035 677034 677031 677030 677028, overlap 677047 GGGTGACATGATAAA GCCGGAGGAA ACT TGCCTCCGGC ATTACTATTTACTTG dcuC 678451 - 677066 - | anaerobic C4-dicarboxylate transport TERM 940 678510 - 678493 - H 89 -2.7 -5.72254 | GTAAATAATAAAAAA TTCCTAA AAGT TAAGGAA AAAATATGCCCAATA TERM 941 679263 - 679240 - g 100 -4.5 -5.73978 | opp_overlap 679257, overlap 679241 679256 ACGACAAAGAAAAAA CCGATCGCT ATAACG AGCGACCGT GGGGCGGCGGTTTTG TERM 942 679262 - 679241 - g 74 -8 -4.01946 | opp_overlap 679257, overlap 679240 679256 CGACAAAGAAAAAAC CGATCGCT ATAACG AGCGACCG TGGGGCGGCGGTTTT crcA 679038 - 679598 + | palmitoyl transferase for Lipid A TERM 943 679731 - 679747 + F 72 -7.3 -4.02302 | opp_overlap 679733 GGTGTACTGGTAACC GACACAG CAT TTGTGTC TATTTTTCATGTAAA cspE 679773 - 679982 + | DNA-binding transcriptional repressor TERM 944 680022 - 680006 - T 86 -9.4 -4.36729 | opp_overlap 680006 AGCAAGAATTCAAAA CCCGCT TAATC AGCGGG TTTTTTTTGGTTTTT TERM 945 680006 - 680022 + T 100 -9.4 -6.11019 | opp_overlap 680006 AGCAAGAATTCAAAA CCCGCT TAATC AGCGGG TTTTTTTTGGTTTTT crcB 680419 - 680036 - | conserved hypothetical protein; putative inner membrane protein associated with chromosome condensation TERM 946 680484 - 680472 - H 75 -9.1 -3.65314 | opp_overlap 680472 680471 TGTAACGCCGAATAA TCGCC GTT GGCGA ATTTTACGACTCTGA TERM 947 681156 - 681138 - g 77 -3 -5.06414 | opp_overlap 681140 681152, overlap 681140 GTGCGGGAACAAAAA TATCGGGC AAA GCCGGATT ATAGATCCCTTTGGC ybeM 680740 - 681303 + | putative amidase tatE 681432 - 681635 + | TatABCE protein translocation system subunit TERM 948 681681 - 681698 + T 100 -11.3 -5.24129 | opp_overlap 681681 TGTTCGATACAAAAA CCCGCTT CAAA AAGCGGG TTTTTTATCAGACAG TERM 949 681698 - 681681 - T 100 -11.3 -4.96848 | opp_overlap 681681 TGTTCGATACAAAAA CCCGCTT CAAA AAGCGGG TTTTTTATCAGACAG lipA 682700 - 681735 - | lipoate synthase TERM 950 682590 - 682623 + g 74 -6 -4.57073 | gap 1, overlap 682592 TTTCATCCATTCCGG CTTGCGCAGCAGGGC TTCGC GCTCTGTTGC-CACG TTTTTAACCGGGATA lipB 684161 - 683520 - | lipoyl-protein ligase ybeD 684525 - 684262 - | hypothetical protein TERM 951 684583 - 684552 - R 70 -7.2 -3.95986 | opp_overlap 684558, overlap 684554 684558 CGTAACGTAATTAAA TAGCAACTCCCGCC AGAA GGCGGGAGTTTTTT ACTGATGCTTAGTAT TERM 952 684581 - 684554 - R 75 -9.8 -3.56675 | opp_overlap 684558, overlap 684552 684558 TAACGTAATTAAATA GCAACTCCCGCC AGAA GGCGGGAGTTTT TTACTGATGCTTAGT TERM 953 684558 - 684577 + r 100 -15 -5.19212 | opp_overlap 684554 684552 684558 GTAATTAAATAGCAA CTCCCGCC AGAA GGCGGGAG TTTTTTACTGATGCT TERM 954 684577 - 684558 - R 100 -15 -3.50456 | opp_overlap 684558, overlap 684554 684552 GTAATTAAATAGCAA CTCCCGCC AGAA GGCGGGAG TTTTTTACTGATGCT dacA 685846 - 684635 - | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5) TERM 955 685529 - 685514 - G 77 -10.4 -3.64049 | CGAAGAACCTTTAAA CACCGG GTTA CCGGTG GCCCATGCGTCGTTG rlpA 687074 - 685986 - | minor lipoprotein mrdB 688197 - 687085 - | cell wall shape-determining protein TERM 956 688138 - 688172 + g 100 -6.5 -5.80364 | CAGTAAGATCAGCAG CATTGTGGGATCGAG ATGGA CTTTATCCCAGAATG TTTTTTTATTCGGAT mrdA 690101 - 688200 - | transpeptidase involved in peptidoglycan synthesis (penicillin-binding protein 2) TERM 957 688765 - 688778 + g 74 -2.3 -5.03747 | opp_overlap 688776, overlap 688756 688776 ACCGGAATGGTGTCA CCCTG ATAC CACGG TTTTTTAAAGCGTTT ybeA 690599 - 690132 - | hypothetical protein ybeB 690920 - 690603 - | hypothetical protein phpB 691791 - 691180 - | putative phosphatase with phosphoglycerate mutase domain nadD 692456 - 691815 - | nicotinic acid mononucleotide adenylyltransferase, NAD(P)-dependent TERM 958 692158 - 692148 - G 70 -4.6 -4.48713 | overlap 692150 CTGACCAATAATAAA CGCC AGC GGCA CGTCCGGTCCTTGCT holA 693489 - 692458 - | DNA polymerase III, delta subunit TERM 959 693468 - 693426 - G 100 -12 -4.45544 | gap 1, opp_overlap 693430, overlap 693428 693430 CGTTACCAAGTAAAA GATACGCCGCGCGCAGCCC TTCATT GAGCTGCGCGCGGAGT-TG TTCCGGGTACAACCG TERM 960 693467 - 693428 - G 100 -17.1 -3.83437 | opp_overlap 693430, overlap 693426 693430 TTACCAAGTAAAAGA TACGCCGCGCGCAGCCC TTCATT GAGCTGCGCGCGGAGTT GTTCCGGGTACAACC TERM 961 693430 - 693465 + g 100 -17.5 -3.63515 | opp_overlap 693428 693426 693430 ACCAAGTAAAAGATA CGCCGCGCGCAGCCC TTCATT GAGCTGCGCGCGGAG TTGTTCCGGGTACAA TERM 962 693465 - 693430 - G 100 -19.7 -3.49321 | opp_overlap 693430, overlap 693428 693426 ACCAAGTAAAAGATA CGCCGCGCGCAGCCC TTCATT GAGCTGCGCGCGGAG TTGTTCCGGGTACAA rlpB 694070 - 693489 - | minor lipoprotein TERM 963 693839 - 693871 + g 70 -4.7 -4.55295 | opp_overlap 693844 CGATGCTCACTTTAC CCAAACGCAGGGATG GAA CGTCCTTACGCGTGG TTTCTTTATCAAGCA TERM 964 694005 - 693986 - G 72 -10 -3.36785 | overlap 693987 TCATAGTGGAAGGAA CCTGCGTG GTGT CACGCAGA TGCCAGCCACACCCG TERM 965 694004 - 693987 - G 73 -11.3 -2.6175 | overlap 693986 CATAGTGGAAGGAAC CTGCGTG GTGT CACGCAG ATGCCAGCCACACCC leuS 696667 - 694085 - | leucyl-tRNA synthetase TERM 966 694213 - 694227 + g 72 -5.6 -4.57341 | overlap 694204 694214 GTTCTTCCGTTGCGT CCACCG GAA CGGTGA TTTTTGCACGGACTT TERM 967 696322 - 696338 + g 78 -5.1 -4.8048 | opp_overlap 696320 AGTCATAACCAAAGC CCAGC ATTTTGA GCTGG TTTTTCATATACGCG TERM 968 696427 - 696452 + g 74 -6.2 -4.57073 | gap 2, opp_overlap 696426 CAGGCAGACCAAATG CGTCC--CAGCC GATT GGCTGCAGGACG TTTTTGCCCAGCATA ybeL 696902 - 697384 + | hypothetical protein rihA 698364 - 697429 - | ribonucleoside hydrolase 1 gltL 699207 - 698482 - | glutamate and aspartate transporter subunit ; ATP-binding component of ABC superfamily gltK 699881 - 699207 - | glutamate and aspartate transporter subunit ; membrane component of ABC superfamily gltJ 700621 - 699881 - | glutamate and aspartate transporter subunit ; membrane component of ABC superfamily TERM 969 700312 - 700295 - G 71 -2 -5.01811 | overlap 700288 GGATGAAAGGAAAAA CTGAAT ATTGGG ATCCAG CTCTGCCTTAAACCA TERM 970 700668 - 700641 - R 100 -16.4 -5.26316 | CTACTCCAGAAAAAA GAGGGTAGCAGC GTTA ACTGCTACCCTC GAAGATTGTTACCCA gltI 701699 - 700791 - | glutamate and aspartate transporter subunit ; periplasmic-binding component of ABC superfamily TERM 971 701034 - 701045 + g 70 -5.8 -4.29326 | overlap 701025 CTTGCCGACGATTTC CCAG TTGT CTGG TTTCTTCGCTTTCGC TERM 972 701249 - 701277 + g 81 -7.3 -4.72272 | overlap 701238 CGGCTTTGCCTTTCA GGTCGGCAAAATC TTT GATATCGCCGCCC TTTTTGGTCAGCAGG ECS88_0691 702153 - 704030 + | hypothetical protein TERM 973 704056 - 704038 - T 100 -13.2 -5.4756 | AACCGTAAGAAAAAA GGGCATGA TAA TCATGCCC CAGAGCGTGTTGAAA lnt 705698 - 704157 - | apolipoprotein N-acyltransferase TERM 974 705648 - 705674 + g 70 -10.2 -3.20723 | gap 1, opp_overlap 705648 GGCACCGAATAATAA CGCCAGCAGCA GGCGAA TGC-GCTGGCG TTCAATTAATGAGGC TERM 975 705674 - 705648 - G 81 -10.2 -3.97307 | gap 1, opp_overlap 705648 GGCACCGAATAATAA CGCCAGCAGCA GGCGAA TGC-GCTGGCG TTCAATTAATGAGGC ybeX 706601 - 705723 - | putative protein involved in divalent ion export TERM 976 706660 - 706637 - R 84 -8.8 -4.43477 | overlap 706639 706656 GTTAGTTAATCAAAA CGCCGTCGTT AATC ACCAACGGCG GGGACGTCTGCCAGT ybeY 707158 - 706691 - | putative metal-dependent hydrolase TERM 977 707099 - 707114 + g 73 -9 -3.67611 | CTGAAACTGGCTCTC TTCCGG TAAC CCGGAA TTATCTTCACATGCC ybeZ 708234 - 707155 - | putative enzyme with nucleoside triphosphate hydrolase domain TERM 978 707322 - 707302 - G 72 -8.3 -3.85389 | overlap 707321 GTGGAAGAAGTTAAA GCTGATCTC TTC GACATCAGC CAGCACTTCGATGGC TERM 979 707834 - 707853 + g 82 -9.2 -4.26292 | overlap 707815 GCCTGGTTTGGCGTG CGCGGCTT AATT ACGCCGCG TTTGGTTTTGATATT TERM 980 708079 - 708102 + g 81 -9.6 -4.10459 | gap 1 ATCGCGGCGATTGAT CTCG-ATGCCG AGA CGGCGTTCGAG TTGTTTGATGTTGTC TERM 981 708343 - 708318 - R 100 -13.3 -5.51046 | gap 1, overlap 708321 TAAAGAGAGAAAAAA CAAGGCCCACCG GAA CGGCGGGCCT-G AGAATTACGGCTGAT TERM 982 708341 - 708321 - R 100 -16.1 -4.78477 | overlap 708318 AGAGAGAAAAAACAA GGCCCACCG GAA CGGCGGGCC TGAGAATTACGGCTG miaB 709772 - 708348 - | isopentenyl-adenosine A37 tRNA methylthiolase TERM 983 709423 - 709400 - G 72 -10.2 -3.39505 | gap 1, opp_overlap 709399 709404 709412 AGCTGATATCTACAA CCGGGCTGCGG TCG CCGC-GCACGG AGTTGATCATCTCCG ubiF 709918 - 711093 + | 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol oxygenase TERM 984 711128 - 711159 + F 100 -13 -3.87815 | opp_overlap 711137 711139 711140 GCATGCCAACCGTAG GTCGGATAAGACGC GGCA GCGTCGCATCCGAC TTTGTAAGGATAAGA TERM 985 711243 - 711216 - f 81 -11.4 -3.2697 | opp_overlap 711222, overlap 711222 ATATACGCAGAAAAG CAAAAAGCTCGC CGAA GCGAGCTTTTTT AATGTGGCTGGGGTA TERM 986 711222 - 711237 + F 100 -10.4 -5.22312 | opp_overlap 711216 711222 GCAGAAAAGCAAAAA GCTCGC CGAA GCGAGC TTTTTTAATGTGGCT TERM 987 711237 - 711222 - f 93 -10.4 -5.1417 | opp_overlap 711222, overlap 711216 GCAGAAAAGCAAAAA GCTCGC CGAA GCGAGC TTTTTTAATGTGGCT TERM 988 711432 - 711443 + F 73 -4.4 -4.81249 | CCGCTTGGCGATACC CCAA CAAA TTGG TTTTTGAATTTGCCG ECS88_0698 711714 - 711803 + | hypothetical protein TERM 989 712322 - 712299 - T 100 -16.8 -3.78329 | opp_overlap 712293 712291 712299 CCCCAGTAACTGAAA TTGCCCCGGA TTTC TCCGGGGCAA TATTACACGTCTTAT TERM 990 712299 - 712322 + T 100 -16.8 -3.06583 | opp_overlap 712299, overlap 712293 712291 CCCCAGTAACTGAAA TTGCCCCGGA TTTC TCCGGGGCAA TATTACACGTCTTAT asnB 713998 - 712334 - | asparagine synthetase B TERM 991 712698 - 712708 + g 71 -3.2 -4.87318 | overlap 712692 GCTTCAAAACATTCA CGCA GGA TGTG TTTTTCCATTTTGCC TERM 992 714068 - 714054 - R 95 -7.8 -5.40072 | overlap 714063 714066 TGCTTGTTAAAAAAA TGCCGC AAA GCAGCA CGGTGCGCAAGCGAT TERM 993 714225 - 714250 + r 86 -13.3 -3.06162 | opp_overlap 714225 714229, overlap 714229 GATGGGTAAAAATAA GAAACCACGCC CTGA GGCGTGGTTGC TATTCAGATAACGTC TERM 994 714250 - 714225 - R 100 -13.3 -4.41633 | opp_overlap 714225 714229, overlap 714229 GATGGGTAAAAATAA GAAACCACGCC CTGA GGCGTGGTTGC TATTCAGATAACGTC TERM 995 714229 - 714246 + r 90 -12.7 -3.37245 | opp_overlap 714225 714229, overlap 714225 GGTAAAAATAAGAAA CCACGCC CTGA GGCGTGG TTGCTATTCAGATAA TERM 996 714246 - 714229 - R 100 -12.7 -4.76802 | opp_overlap 714229 714225, overlap 714225 GGTAAAAATAAGAAA CCACGCC CTGA GGCGTGG TTGCTATTCAGATAA nagD 715006 - 714254 - | NMP phosphatase nagC 716274 - 715054 - | DNA-binding transcriptional dual regulator, repressor of N-acetylglucosamine nagA 717431 - 716283 - | N-acetylglucosamine-6-phosphate deacetylase TERM 997 716586 - 716576 - G 70 -4 -4.59773 | TTTTACCCGCAAAAA TGAA CTG TTCA ATGTTGGCACCTGCT TERM 998 717481 - 717456 - R 72 -6.9 -4.15748 | gap 1, overlap 717457 CGATTTTAAAAAATA TTGCCCTGAGCA AGG TG-TCAGGGCAG GGATAATAATTACAG TERM 999 717480 - 717457 - R 73 -10.4 -3.08726 | gap 1, overlap 717456 GATTTTAAAAAATAT TGCCCTGAGCA AGG TG-TCAGGGCA GGGATAATAATTACA nagB 718291 - 717491 - | glucosamine-6-phosphate deaminase TERM 1000 717905 - 717918 + g 100 -6.7 -5.52023 | AAACAGATGAATTTT TCCGT AAGA ACGGA TTTTTTCTTCATACT TERM 1001 718679 - 718701 + G 74 -11.2 -3.1886 | overlap 718691 TACAGCTCCCTATCG CGGTGCTGCC GGT GGCGGCGCTG TTGCTGCGATTCGGT nagE 718624 - 720570 + | fused N-acetyl glucosamine specific PTS enzymes: IIC component ; IIB component ; IIA component TERM 1002 720625 - 720567 - T 78 -5.59999 -5.01811 | gap 3, opp_overlap 720561 720605 720621, overlap 720571 720572 720612 720621 GTATGAAATCAAAAA GTAATCTGCTTTA-TGTCTGATGCGACGC GGCA GCGTCGCATCAGACAATAAAA-AG-CGGC AGGGATCTTCTCTGC TERM 1003 720622 - 720571 - T 100 -14.1 -3.90592 | opp_overlap 720561 720605 720621, overlap 720567 720572 720612 720621 GAAATCAAAAAGTAA TCTGCTTTA-TGTCTGATGCGACGC GGCA GCGTCGCATCAGACAATAAAA-AGC GGCAGGGATCTTCTC TERM 1004 720621 - 720572 - T 100 -17.6 -2.92728 | opp_overlap 720561 720605, overlap 720571 720567 720612 AAATCAAAAAGTAAT CTGCTTTA-TGTCTGATGCGACGC GGCA GCGTCGCATCAGACAATAAAA-AG CGGCAGGGATCTTCT TERM 1005 720605 - 720658 + T 100 -18.5 -3.17194 | gap 1, opp_overlap 720572 720571 720567 720612 720621, overlap 720621 GACGCGGCAGCGTCG CATCAGACAATAAAAAGCGGCAGGGA TCT TCTCTGCCGCTTTTT-TTGTCTGAGA TTACATTGGGAAGAT TERM 1006 720651 - 720612 - T 100 -16 -2.78596 | gap 1, opp_overlap 720605 720621, overlap 720572 720571 720567 720621 CAGCGTCGCATCAGA CAATAAAAAGCGGCAGGGA TCT TCTCTGCCGCTTTTT-TTG TCTGAGATTACATTG TERM 1007 720643 - 720621 - T 100 -13.4 -5.25699 | opp_overlap 720605 720621, overlap 720571 720567 720612 ATCAGACAATAAAAA GCGGCAGGGA TCT TCTCTGCCGC TTTTTTTGTCTGAGA TERM 1008 720621 - 720643 + T 100 -15.6 -5.71712 | opp_overlap 720571 720567 720621 720612, overlap 720605 ATCAGACAATAAAAA GCGGCAGGGA TCT TCTCTGCCGC TTTTTTTGTCTGAGA TERM 1009 720699 - 720679 - T 74 -3.2 -5.0916 | overlap 720681 TTGGGAAGATAAAAA CAGCGCCT GCACA AAGCGCCA GAATGCGGATGAGAT TERM 1010 721680 - 721721 + T 77 -3.6 -5.24129 | AACTGCCTTTATTGA CCAGGCTTATCATCGCAG ATTTAA CGTTGCTGATAAGCCGGG TTTTTTGTAGCGCCG ECS88_0707 722422 - 721952 - | hypothetical protein ECS88_0708 723588 - 722419 - | Putative Glycosyl hydrolase, BNR repeat TERM 1011 722690 - 722703 + g 72 -8.1 -3.93256 | opp_overlap 722682 722681 CAGAAAGCGGAGCGT CCGAC GGCT GTCGG TTCTTTGCGGCTGTC TERM 1012 722717 - 722732 + g 76 -9 -3.78775 | GGTTCTTTGCGGCTG TCGTCG CCAT CGACGA TTTCGTCATAAAGCG TERM 1013 723646 - 723665 + r 80 -7.2 -4.56978 | GAGTGCGATTCATGC GTTTCGAT CAAT GTCGAAAC TTTCTTCTTTCACGG dapA 725321 - 724434 - | putative dihydrodipicolinate synthase ECS88_0712 726482 - 725325 - | putative alcohol dehydrogenase TERM 1014 725644 - 725631 - G 70 -5.9 -4.16016 | CCAGGGGCGAACAAA CGCCA TGCA CGGCG CCAGCAAGATGGCAT ECS88_0713 726610 - 727887 + | hypothetical protein ECS88_0714 727880 - 728866 + | Putative pyridoxine phosphate biosynthetic protein (PdxA-like protein) TERM 1015 729217 - 729246 + G 91 -2.7 -5.47821 | CACATTTACCGCTTC GCGTGATCACCAG CGAC CTGCATATCGCGC TTTTTTTGGCTGAAT TERM 1016 729458 - 729444 - g 85 -10 -4.27192 | opp_overlap 729442 AAAGCCGCACTAAAA CGCGAT CTT ATCGCG CATGCTTCGCGCAAA ECS88_0715 728868 - 729629 + | putative transcriptional regulator, DeoR-family TERM 1017 730877 - 730865 - g 86 -9.1 -4.42639 | opp_overlap 730859 730869, overlap 730867 AGATCTCAACGAAAA TGCGC CGC GCGCA ATGGCGGTTATCGAT glnS 729849 - 731513 + | glutamyl-tRNA synthetase TERM 1018 731584 - 731600 + F 100 -11.5 -6.04378 | opp_overlap 731584 GCAAACAATCCCAAA CGCCGCG CTC TGCGGCG TTTTTTTTCTGCTTT TERM 1019 731600 - 731584 - f 85 -10.8 -3.74238 | opp_overlap 731584 GCAAACAATCCCAAA CGCCGC GCTCT GCGGCG TTTTTTTTCTGCTTT TERM 1020 732813 - 732793 - g 74 -8.3 -3.86897 | opp_overlap 732792 732799 GGTACGCGCGATAAA GTTGACGAT CGC AGCGTCAAC GATCTTTATGACGGC TERM 1021 732826 - 732852 + G 74 -8.7 -3.90112 | gap 1, overlap 732826 AACGATCTTTATGAC GG-CACCGCCTG GCTG CAGGCGTTGACC TTTGGTTACCGGGCG TERM 1022 733075 - 733062 - g 81 -6.7 -4.63527 | GTATGACCTGAAAAA CTGGA ATCT TCCAG GCTTCGCCATCGGCG TERM 1023 733221 - 733237 + G 79 -12.3 -3.0464 | CACCATTCAGGACGG TCGTGCC AAG GGCACGA TGTTCAAACTGCATT ybfM 731962 - 733368 + | putative outer membrane porin ybfN 733418 - 733744 + | putative lipoprotein TERM 1024 733745 - 733764 + T 80 -5.7 -5.10656 | opp_overlap 733742 733745 733747 AGTAATAACAAATAA GTGAGAG CTGTAA CTCTCGC TTTTCTTATTTTCCT TERM 1025 733786 - 733813 + T 77 -11.4 -2.72463 | opp_overlap 733791, overlap 733791 TATTTTCCTTGTATA AAAAAGCCAACC TGCA GGTTGGCTTTTC TCGTTCAGGCTGGCT TERM 1026 733791 - 733808 + T 100 -11.3 -4.5442 | opp_overlap 733791, overlap 733786 TCCTTGTATAAAAAA GCCAACC TGCA GGTTGGC TTTTCTCGTTCAGGC TERM 1027 733808 - 733791 - T 100 -11.3 -5.24129 | opp_overlap 733791 733786 TCCTTGTATAAAAAA GCCAACC TGCA GGTTGGC TTTTCTCGTTCAGGC fur 734274 - 733828 - | DNA-binding transcriptional dual regulator of siderophore biosynthesis and transport TERM 1028 734557 - 734530 - g 100 -16.4 -3.19463 | overlap 734532 GGCATTATCTATTAA TACGGCGTAGAC ATGA GTCTACGCCGCA TCACATCAGGCATTG TERM 1029 734555 - 734532 - g 100 -16.8 -3.15996 | overlap 734530 CATTATCTATTAATA CGGCGTAGAC ATGA GTCTACGCCG CATCACATCAGGCAT ECS88_0720 734319 - 734573 + | hypothetical protein fldA 735093 - 734563 - | flavodoxin 1 TERM 1030 734796 - 734812 + g 70 -10.9 -2.78495 | opp_overlap 734795, overlap 734794 TGGTGCCCAATGCAT CGCAGAA GTA TTCTGCG TAATCTTCCTGGTCG ybfE 735526 - 735233 - | LexA regulated protein TERM 1031 735612 - 735649 + r 83 -7.6 -4.77157 | gap 1, opp_overlap 735598 735593 735591 735633, overlap 735613 AGCGCGATGAGTCAC GCCAACGTCCACG-CGC GGAAA GCGACGCGGACGCTGGG TTTTTAATCAGTTGC TERM 1032 735613 - 735648 + r 81 -11.1 -3.45571 | gap 1, opp_overlap 735593 735591 735633, overlap 735612 GCGCGATGAGTCACG CCAACGTCCACG-CGC GGAAA GCGACGCGGACGCTGG GTTTTTAATCAGTTG ybfF 736430 - 735666 - | putative esterase TERM 1033 736819 - 736837 + G 81 -11 -3.60151 | opp_overlap 736818 736819 ACGATTAAAGACAAG GTTCGCGC AAT GCGTGAAC TTCTGCTTTCGGACG seqA 736615 - 737160 + | regulatory protein for replication initiation TERM 1034 737221 - 737200 - g 78 -10.9 -3.42621 | opp_overlap 737195 AATGGCAATCCACAA TCGTGCAGG CCAA CCTGCACAA CAGAGTGATTTGATT pgm 737186 - 738826 + | phosphoglucomutase TERM 1035 738846 - 738865 + T 100 -11.4 -5.41359 | opp_overlap 738846 ATCAAATAAGAAAAA GGGCGGTC GGAA GATCGCCC TTTTTTGCTTTGCTT TERM 1036 738865 - 738846 - T 100 -9.2 -5.39905 | opp_overlap 738846 ATCAAATAAGAAAAA GGGCGGTC GGAA GATCGCCC TTTTTTGCTTTGCTT potE 740202 - 738883 - | putrescine/proton symporter: putrescine/ornithine antiporter speF 742397 - 740199 - | ornithine decarboxylase isozyme, inducible TERM 1037 740535 - 740558 + g 77 -6 -4.7153 | overlap 740539 CATGCTGACGCGTGG GAAGTGTTCC TTAC GGAACATCTC TTTTTGCAGTTGTTT TERM 1038 741694 - 741680 - G 74 -7.8 -4.03234 | CTGTTTCCAGATAAA CCGGTG TTG CACCAG CCTGTAGCAAGGCCC kdpE 743763 - 743086 - | DNA-binding response regulator in two-component regulatory system with KdpD TERM 1039 743132 - 743157 + g 81 -6 -4.83615 | overlap 743134 TCAGTAATAAAATGG CGGGGGCGGG CGGGAT CCTGCTCCAG TTTTTGTCGCAGATG kdpD 746444 - 743760 - | fused sensory histidine kinase in two-component regulatory system with KdpE: signal sensing protein ; sensory histidine kinase TERM 1040 745102 - 745088 - G 73 -11.4 -2.82519 | overlap 745085 TCACCACATTAATGA CGGTGG CAA CCACCG AAGGCCAGCGTCCGT TERM 1041 745962 - 745939 - G 74 -2.2 -5.08824 | opp_overlap 745945, overlap 745942 GCGGCATCGAAAAAA GGATCGGGCA CGGT TTCCCGCACC TGAATTCCGGTGACG TERM 1042 746114 - 746093 - G 73 -11.6 -2.66692 | opp_overlap 746093, overlap 746092 TAGGATGACGAGAAC CTGGCGCA TTACTG TGCGCCAG TTCGTCCATTAAGAT TERM 1043 746093 - 746114 + g 81 -12.3 -3.22091 | opp_overlap 746093 746092 TAGGATGACGAGAAC CTGGCGCAT TACT GTGCGCCAG TTCGTCCATTAAGAT kdpC 747009 - 746437 - | potassium translocating ATPase, subunit C kdpB 749066 - 747018 - | potassium translocating ATPase, subunit B TERM 1044 747316 - 747299 - G 77 -9.9 -3.61517 | opp_overlap 747297 ACGCCGCTGGAATAA TGGCGAA GTAT TTCGCCA CATCGTTGGCAATGC TERM 1045 748055 - 748073 + g 72 -4.5 -4.72272 | gap 1 CCAGCGAAGCCAGTT GTGC-GGC GTCG GCCAGCGC TTTTTCCTCCACGCC TERM 1046 748360 - 748344 - G 74 -7.9 -4.11216 | overlap 748345 GCCCCACGCGGAAAA CGGCCAC AGC GTGGCGG TTGCCAGTAAAAAGA kdpA 750762 - 749089 - | potassium translocating ATPase, subunit A TERM 1047 750218 - 750202 - G 82 -2.2 -5.4505 | TTGTTGAATAAAAAA CAGTGC GATCA GCAATG CTACGGGGGTTAACA kdpF 750965 - 750762 - | potassium ion accessory transporter subunit TERM 1048 750834 - 750816 - G 77 -3 -5.14163 | opp_overlap 750818, overlap 750818 ACCCAGTAATAAAAA CACCAGCA ACA CGCCGGTT ATCACGCCTGCACTC TERM 1049 750964 - 750953 - G 86 -5.8 -5.14894 | opp_overlap 750953 AAAAAAGTATAAAAA TGGC AAAA GCCA TGATTTAACTAATGT ybfA 751164 - 751370 + | hypothetical protein TERM 1050 751392 - 751423 + F 100 -17.4 -5.04385 | opp_overlap 751392 751397, overlap 751397 AACATGACGTTTAAA GAAAACCGCCGGTG GAAA CGCTGGCGGTTTTC TTTTTTCGGCGTCTA TERM 1051 751423 - 751392 - f 100 -13 -3.59087 | opp_overlap 751392 751397, overlap 751397 AACATGACGTTTAAA GAAAACCGCCGGTG GAAA CGCTGGCGGTTTTC TTTTTTCGGCGTCTA TERM 1052 751397 - 751418 + F 100 -11.5 -5.42198 | opp_overlap 751392 751397, overlap 751392 GACGTTTAAAGAAAA CCGCCGGTG GAAA CGCTGGCGG TTTTCTTTTTTCGGC TERM 1053 751418 - 751397 - f 83 -7.1 -4.87803 | opp_overlap 751397 751392, overlap 751392 GACGTTTAAAGAAAA CCGCCGGTG GAAA CGCTGGCGG TTTTCTTTTTTCGGC TERM 1054 751818 - 751804 - g 82 -11.4 -3.50572 | opp_overlap 751804 ATTGATTCCACAGAA CGCCAG CAG CTGGCG GCGCTTATCGACAGT ybgA 751471 - 751980 + | hypothetical protein TERM 1055 752060 - 752110 + G 73 -11.9 -2.69151 | gap 1, opp_overlap 752094, overlap 752040 752056 752057 CTGCCGCAATTCGTC TGCG-CGCGTGCTGGCGTTGTATA TCGC TACACCACGCCAGTGGGCGGCGCA TAATGTGTCGCCGCG TERM 1056 752951 - 752941 - g 78 -8.2 -4.15565 | opp_overlap 752940 752941 GGCAGGAGGGCAAAA CGGG ATA CCCG ATTGTCGATGCTGCC phr 751977 - 753395 + | deoxyribodipyrimidine photolyase, FAD-binding TERM 1057 753425 - 753387 - T 77 -8.9 -3.81929 | opp_overlap 753383 753378, overlap 753390 GAAGAAGCGAGGAAA GGAGCCTGATAAAACGC AGCGA GCGTTTTATCAGGCATG GTGCTGGCTTATTAA TERM 1058 753422 - 753390 - T 100 -19.4 -2.98381 | opp_overlap 753383 753378, overlap 753387 GAAGCGAGGAAAGGA GCCTGATAAAACGC AGCGA GCGTTTTATCAGGC ATGGTGCTGGCTTAT ybgH 754918 - 753437 - | putative transporter TERM 1059 754118 - 754132 + g 77 -2.8 -5.1417 | opp_overlap 754088 GGTAACAATCAGCCC CAGC TCCTTAC GCTG TTTTTGGTTTTCTGC TERM 1060 755730 - 755754 + G 70 -3.5 -4.71426 | gap 1, overlap 755729 755733 AAAGTTTTATCGATA GCG-CCGCGC GTTTTG GCGTGGATGC TTTTATTACTGGCGA ybgI 755189 - 755932 + | conserved hypothetical protein; putative metal-binding protein ybgJ 755955 - 756611 + | putative hydrolase subunit ybgK 756605 - 757537 + | putative hydrolase subunit TERM 1061 757703 - 757720 + G 78 -8.5 -4.25104 | TGGCGCGCACCCGAG TTTTCCC GACA GGGAAAA TTTTGGTCGCAGCGC ybgL 757527 - 758261 + | putative lactam utilization protein, UPF0271 family nei 758297 - 759088 + | endonuclease VIII ; 5-formyluracil/5-hydroxymethyluracil DNA glycosylase abrB 760131 - 759085 - | hypothetical protein TERM 1062 760661 - 760676 + r 73 -2.6 -5.06103 | opp_overlap 760654, overlap 760663 760667 760668 CAAATCAATCACCAG TGTTTC CGGT GAAATA TTTTTTCACCATTAT TERM 1063 760776 - 760751 - R 84 -7.6 -4.99035 | gap 1 TCAGCCATATAAAAA GAACCCGCTCT ATTAA AG-GCGGGTCC GGAAAGTGAACGGCT gltA 762088 - 760805 - | citrate synthase TERM 1064 762398 - 762408 + H 70 -5.4 -4.32436 | CTTCATAACTTTTAC GCAT TAT ATGC TTTTCCTGGTAATGT TERM 1065 762896 - 762907 + G 70 -5.8 -4.1822 | CTCCATCGCGTTTCC GGTG TGAT CACC TTTGTTGCAGTGGGC sdhC 762797 - 763186 + | succinate dehydrogenase, membrane subunit, binds cytochrome b556 sdhD 763180 - 763527 + | succinate dehydrogenase, membrane subunit, binds cytochrome b556 sdhA 763527 - 765293 + | succinate dehydrogenase, flavoprotein subunit sdhB 765309 - 766025 + | succinate dehydrogenase, FeS subunit TERM 1066 766064 - 766031 - f 79 -11.7 -2.65279 | opp_overlap 766044, overlap 766041 766044 TAATGCGTAAACCCA GGCCTGATAAGACGC GCAA GCGTCGCATCAGGCA ACCAGTGCCGGGTGC TERM 1067 766164 - 766121 - f 100 -12.4 -4.0683 | opp_overlap 766156, overlap 766113 766162 AAAGAAATGCAGAAA CCGTAGGCCTGATAAGACGC GCAA GCGTCGCATCAGGCAAACAG CGCCGGATGCGGCGT TERM 1068 766257 - 766217 - f 71 -7.7 -3.83771 | opp_overlap 766217 766218, overlap 766218 AAGAAATGCAGGAAA TCTTTAAAAACTGCCCCTG ACA CTAAGACAGTTTTTAAAGG TTCCTTAGCGGACGC TERM 1069 766256 - 766218 - f 78 -11.2 -2.89178 | opp_overlap 766218 766217, overlap 766217 AGAAATGCAGGAAAT CTTTAAAAACTGCCCCTG ACA CTAAGACAGTTTTTAAAG GTTCCTTAGCGGACG TERM 1070 766945 - 766929 - g 83 -5.1 -5.11063 | opp_overlap 766929 766927, overlap 766912 AGCACTGAAGAAAAA CGCTG GATCCAA CAGCG TATTGAGTCTGGTCG TERM 1071 767001 - 766989 - g 100 -7.7 -5.48063 | AGCGAAGAGAAAAAA CGCTT CTT AAGCG AACTGACCGCCGCTG TERM 1072 767235 - 767208 - g 71 -2 -5.00616 | gap 1, opp_overlap 767216, overlap 767210 GTGCTGGGTAAAAAA CCGCAAGACTTGT TCG ACGAGT-TTGCCG GTAAACATAAAGAAC sucA 766386 - 769187 + | 2-oxoglutarate decarboxylase, thiamin-requiring sucB 769202 - 770419 + | dihydrolipoyltranssuccinase TERM 1073 770440 - 770474 + F 81 -10.8 -3.55444 | TAAGCTTCACCTGCA CTGTAGACCGACGT GGATAGG GTGTCGGTCTACGG TTTAAAAGATAACGA TERM 1074 770938 - 770918 - g 73 -4 -4.81249 | gap 1 GTGGAAATTGAAAAA GTGGCGGAA GAAA CTCCGC-AC CTGATCCACAAAGTT sucC 770513 - 771679 + | succinyl-CoA synthetase, beta subunit sucD 771679 - 772548 + | succinyl-CoA synthetase, NAD(P)-binding, alpha subunit TERM 1075 772606 - 772566 - f 88 -9.1 -4.45068 | opp_overlap 772566 772563 772605, overlap 772568 772569 ATCTGTAATAAGAAA TAGCCCT-CGCCGCTTCCC CCTAC AGGAAG-GGCGAAGGGCTG TCGGTTTCGACATGG TERM 1076 772566 - 772606 + F 74 -10.6 -2.64803 | opp_overlap 772566 772568 772569, overlap 772563 772605 ATCTGTAATAAGAAA TAGCCC-TCGCCGCTTCC CCCTACA GGAAG-GGCGAAGGGCTG TCGGTTTCGACATGG TERM 1077 772604 - 772568 - f 93 -11.7 -3.82963 | opp_overlap 772566 772563, overlap 772566 772569 CTGTAATAAGAAATA GCCCT-CGCCGCTTCCC CCTAC AGGAAG-GGCGAAGGGC TGTCGGTTTCGACAT TERM 1078 772602 - 772569 - f 80 -11.8 -2.89055 | gap 1, opp_overlap 772566 772563, overlap 772568 772566 TGTAATAAGAAATAG CCCTCGCCGCTTCCC CCTAC AGGAAG-GGCGAAGG GCTGTCGGTTTCGAC TERM 1079 772624 - 772641 + F 100 -11.3 -5.4505 | GGTTTCGACATGGTT GGCCATC TTAT GATGGCC TTTTTTATTCGGGCA TERM 1080 773579 - 773561 - g 76 -7.4 -4.18197 | ACCTGCGATGCAAAA CAGTGGAG ATA CTCAACTG GCAAGAAAATATAAT ECS88_0755 772788 - 773903 + | conserved hypothetical protein, TPR repeat protein TERM 1081 774882 - 774895 + F 74 -3.9 -4.99435 | CATATGTGGTTGATT TTGAT ATAA ATCAA TTTTTAATTCTTGAA cydA 775233 - 776801 + | cytochrome d terminal oxidase, subunit I cydB 776817 - 777956 + | cytochrome d terminal oxidase, subunit II TERM 1082 778119 - 778146 + G 81 -12.1 -3.21595 | gap 1, opp_overlap 778125, overlap 778125 CTTGTATGCGGTAAT GGACAAGCGCCC CCTGC GGGCGCTT-TCC TTCGTGATGGCACTT TERM 1083 778141 - 778125 - g 76 -10.8 -3.41878 | opp_overlap 778125 778119 TGCGGTAATGGACAA GCGCCC CCTGC GGGCGC TTTCCTTCGTGATGG TERM 1084 778125 - 778141 + G 86 -10.8 -3.97042 | opp_overlap 778125, overlap 778119 TGCGGTAATGGACAA GCGCCC CCTGC GGGCGC TTTCCTTCGTGATGG TERM 1085 778302 - 778315 + G 77 -3.1 -5.055 | TCGTCCGCAGAAGGT TCTCT GGCA AGGGA TTTTTTGCCCATTGC ybgE 778084 - 778377 + | conserved hypothetical protein; putative inner membrane protein TERM 1086 778423 - 778398 - f 100 -12 -4.57341 | opp_overlap 778398 AATTCTCTTTAAAAA TTTATGGGCC GAGTCA GGCCCATAAA TTTTTACGCTCCCTT TERM 1087 778398 - 778423 + F 100 -12 -4.63184 | opp_overlap 778398 AATTCTCTTTAAAAA TTTATGGGCC GAGTCA GGCCCATAAA TTTTTACGCTCCCTT ybgC 778527 - 778931 + | acyl-CoA thioesterase tolQ 778928 - 779620 + | membrane spanning protein in TolA-TolQ-TolR complex tolR 779624 - 780052 + | membrane spanning protein in TolA-TolQ-TolR complex TERM 1088 780487 - 780470 - g 74 -3.4 -4.93296 | gap 1, overlap 780473 TCAGGAGCAGAAAAA GCAGGCT GAAGA AGCC-GC AAAACAGGCCGAGTT TERM 1089 780691 - 780672 - g 87 -4.8 -5.27923 | GAAGCGCAGAAAAAA GCCGAGGC TGCT GCTGCGGC GCTGAAGAAGAAAGC TERM 1090 780730 - 780705 - g 85 -8.9 -4.44667 | overlap 780721 780723 GCGCTGAAGAAGAAA GCTGAAGCGGC AGAA GCAGCTGCAGC TGAAGCAAGAAAGAA TERM 1091 780836 - 780809 - g 77 -8.4 -4.07687 | overlap 780796 780828 AGCGGCTGCTGAAAA GGCTGCAGCT GATAAGAA AGCGGCAGCC GACAAAAAAGCAGCA TERM 1092 780865 - 780846 - g 87 -4.9 -5.26316 | overlap 780847 780858 780859 GCAGCCGACAAAAAA GCAGCAG AAAAAG CGGCTGC TGAAAAGGCAGCAGC TERM 1093 780880 - 780858 - g 83 -6.2 -4.95806 | overlap 780846 780847 780859 780876 AAAGCAGCAGAAAAA GCGGCTGC TGAAAAG GCAGCAGC TGATAAGAAAGCAGC TERM 1094 780913 - 780891 - g 90 -9.8 -4.32177 | overlap 780876 780906 780908 GCAGCTGATAAGAAA GCAGCGGC AGAAAAA GCCGCCGC AGACAAAAAAGCGGC TERM 1095 780931 - 780906 - g 85 -6.8 -4.84359 | overlap 780891 780908 780924 GCAGCGGCAGAAAAA GCCGCCGC AGACAAAAAA GCGGCAGC GGCAAAAGCAGCAGC TERM 1096 780976 - 780924 - g 100 -8.2 -5.36441 | opp_overlap 780969, overlap 780906 780908 780939 780954 780969 780970 GCCGCAGACAAAAAA GCGGCAGCGGCAAAAGCAGCAGCT GAAAA AGCCGCTGCAGCAAAAGCTGCCGC AGAGGCAGATGATAT TERM 1097 780961 - 780939 - g 91 -11.3 -4.11216 | overlap 780924 780954 GCGGCAGCGGCAAAA GCAGCAGCT GAAAA AGCCGCTGC AGCAAAAGCTGCCGC TERM 1098 780982 - 780954 - g 100 -13.1 -4.63527 | opp_overlap 780969, overlap 780939 780924 780969 780970 GCAGCAGCTGAAAAA GCCGCTGCAGCAA AAG CTGCCGCAGAGGC AGATGATATTTTCGG tolA 780117 - 781367 + | membrane anchored protein in TolA-TolQ-TolR complex tolB 781500 - 782792 + | periplasmic protein pal 782827 - 783348 + | peptidoglycan-associated outer membrane lipoprotein TERM 1099 783412 - 783428 + G 100 -15.1 -4.25104 | TTACTGGTTGGTATA GCGGCCC CCT GGGCCGC TTTTGCTCAGGCACC TERM 1100 783610 - 783597 - g 70 -5.3 -4.29738 | TCAGATTCAGGAAAA TCAGT ATCA ACTGA ATCAGGTCGTGGAGC ybgF 783358 - 784149 + | putative RNA binding protein TERM 1101 784192 - 784157 - f 73 -9.1 -3.4285 | opp_overlap 784161, overlap 784159 CGATGTAATGCATAA CACACGACCAGAAGT CGCATT ATTTCTGGTCGTGTC GTGCGAATCATAAGC TERM 1102 784190 - 784159 - f 85 -11.7 -3.28368 | opp_overlap 784161, overlap 784157 ATGTAATGCATAACA CACGACCAGAAGT CGCATT ATTTCTGGTCGTG TCGTGCGAATCATAA TERM 1103 784161 - 784188 + F 74 -10.7 -2.79302 | opp_overlap 784159 784157 GTAATGCATAACACA CGACCAGAAGT CGCATT ATTTCTGGTCG TGTCGTGCGAATCAT TERM 1104 785051 - 785019 - f 100 -15.7 -3.19463 | opp_overlap 785020 785028, overlap 785020 785028 TGCACGACCCACCAA TGCAAAAAAGCGCCC TAA AGGCGCTTTTTTGCT ATTCAGGCATCTCTC TERM 1105 785020 - 785050 + F 100 -18.5 -3.0395 | opp_overlap 785019 785020 785028, overlap 785028 GCACGACCCACCAAT GCAAAAAAGCGCC CTAAA GGCGCTTTTTTGC TATTCAGGCATCTCT TERM 1106 785050 - 785020 - f 100 -19.2 -2.51464 | opp_overlap 785020 785028, overlap 785019 785028 GCACGACCCACCAAT GCAAAAAAGCGCCC TAA AGGCGCTTTTTTGC TATTCAGGCATCTCT TERM 1107 785042 - 785028 - f 93 -9.2 -5.17576 | opp_overlap 785020 785028, overlap 785020 785019 CACCAATGCAAAAAA GCGCCC TAA AGGCGC TTTTTTGCTATTCAG TERM 1108 785028 - 785042 + F 95 -8.5 -5.27779 | opp_overlap 785028 785020 785019, overlap 785020 CACCAATGCAAAAAA GCGCC CTAAA GGCGC TTTTTTGCTATTCAG nadA 785295 - 786338 + | quinolinate synthase, subunit A TERM 1109 787086 - 787056 - g 100 -15.5 -3.15544 | CCGGATGTGGATCAA CAGCGCACGCGAA AGAGG TTCACGCGCGCTG TCCCATTAATGGTGA pnuC 786376 - 787095 + | nicotinamide mononucleotide transporter zitB 788033 - 787092 - | zinc efflux system TERM 1110 787738 - 787727 - G 70 -4.4 -4.53034 | CCCAGACAATCAAAA TGGT AATC ACCA CCAGGGCGATAGCAT TERM 1111 788125 - 788106 - R 90 -9.3 -4.78661 | opp_overlap 788105 788106 AGGGAAAAATTAAAA GGGAGAG ACTCCG CTCTCCC ATTATTGGCTATTTT ybgS 788527 - 788147 - | hypothetical protein TERM 1112 788706 - 788718 + H 74 -3.3 -5.16071 | AGATCTCGTTTTTCG CGACA ATC TGGCG TTTTTCTTGCTAATT aroG 788843 - 789895 + | 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, phenylalanine repressible TERM 1113 789890 - 789880 - T 71 -8.2 -3.794 | overlap 789881 GGCGAATGCAGTAAA CGCG CGT CGCG GGTAAAGTTTAATTG TERM 1114 789906 - 789935 + T 91 -12.9 -3.14132 | GGTAAAGTTTAATTG TCGGATGCGCCGT CAGA GTGGCGTATCCGA TTAATCACCGGAGGC TERM 1115 790043 - 790008 - T 100 -11.4 -4.90266 | gap 1, opp_overlap 790008 790015, overlap 790015 GGTAGCAACGAAAAA TAAAAAAGCCGACT-CA TTT TGCAGTCGGCTTTCTCA TTTTTAAGCGAATGA TERM 1116 790008 - 790043 + T 77 -7 -4.57569 | gap 1, opp_overlap 790008 790015, overlap 790015 GGTAGCAACGAAAAA TAAAAAAGCCGACT-CA TTT TGCAGTCGGCTTTCTCA TTTTTAAGCGAATGA TERM 1117 790036 - 790015 - T 100 -9.5 -5.95286 | gap 1, opp_overlap 790008 790015, overlap 790008 ACGAAAAATAAAAAA GCCGACT-CA TTT TGCAGTCGGC TTTCTCATTTTTAAG TERM 1118 790015 - 790036 + T 84 -9.5 -4.2687 | gap 1, opp_overlap 790015 790008, overlap 790008 ACGAAAAATAAAAAA GCCGACT-CA TTT TGCAGTCGGC TTTCTCATTTTTAAG gpmA 790814 - 790062 - | phosphoglyceromutase 1 TERM 1119 790186 - 790172 - G 81 -9.2 -4.02132 | CGTCAAACTCATAAA CCAGCG GCA CGCCGG TCGGGATATTCAGCT TERM 1120 790504 - 790514 + g 78 -8.2 -4.1552 | TCGCCATACTTTTCA GCGG TTT CCGC TTTGTTCAGACCCTG TERM 1121 790682 - 790697 + g 74 -6.1 -4.45664 | overlap 790680 AACCTTCCTCTTTCA GCAGC TTACCT GCTGC TTTTGCTTCGCTTAC TERM 1122 791010 - 790994 - R 85 -10.1 -4.27467 | CAATATGAAGATAAA GCCCTCA TGA CGAGGGC TTAACATTACTGAGC galM 792057 - 791017 - | galactose-1-epimerase (mutarotase) galK 793199 - 792051 - | galactokinase galT 794249 - 793203 - | galactose-1-phosphate uridylyltransferase TERM 1123 794036 - 794052 + g 81 -6.5 -4.8667 | overlap 794037 TAGTGAAAACGTAAG TCCCGGT GTA ATCGGGG TTTTTATCGCCTGTC galE 795275 - 794259 - | UDP-galactose-4-epimerase TERM 1124 794513 - 794528 + g 77 -6.1 -4.65895 | TGTAGATGTGTACGC CTGGC TTGTTC GCCAG TTTTTCCATCGCCAC TERM 1125 794763 - 794780 + g 70 -4.1 -4.60041 | gap 1, overlap 794765 794766 GCGCAGCAGGGCAAT GCTCCAGT CCG GCTGG-GC TTTTTGCAGATCGGT modF 797010 - 795538 - | fused molybdate transporter subunits of ABC superfamily: ATP-binding components TERM 1126 796236 - 796209 - G 75 -7.1 -4.31433 | gap 1, opp_overlap 796209 796212 GATCGTTATAAGAAA CCACGCCATTGT TCAGC ACAAT-GCGCGG TTCGTTGGCGGGTAA TERM 1127 796571 - 796546 - G 84 -11.1 -3.78124 | opp_overlap 796566 ATCAAGGATCAACAA GTCAGGCTCCG ACAT CAGCGCCTGAC ACAGCAGGGTTTTTC modE 797866 - 797078 - | DNA-binding transcriptional dual regulator TERM 1128 797168 - 797184 + g 81 -10.9 -3.57462 | CGCTTCATTTACCGG CACTGTG GCG CACAGTG TTTGCCCGTCGGGTA ybhT 797995 - 798144 + | hypothetical protein TERM 1129 798154 - 798171 + F 100 -8.4 -5.35224 | CATTGATTCCCTGAA TGCCCG CTTAGT CGGGCA TTTTCTTTTTCTCAA TERM 1130 798936 - 798926 - g 72 -6.8 -4.17491 | AGCAAAGGGGTAAAA GTGG TTG CCAC CTTCCCGGAAGATTC modA 798311 - 799084 + | molybdate transporter subunit ; periplasmic-binding component of ABC superfamily TERM 1131 799476 - 799489 + G 76 -3.7 -4.97158 | opp_overlap 799468, overlap 799472 AAGAACACTGGGGGC CGGGC GCTG GCGCG TTTTCTTTACTATCA modB 799084 - 799773 + | molybdate transporter subunit ; membrane component of ABC superfamily modC 799776 - 800834 + | molybdate transporter subunit ; ATP-binding component of ABC superfamily TERM 1132 800847 - 800827 - T 74 -9.7 -3.2964 | AAAGTGTGTCGATAA CCGCCTGAT TAA ATCAGGTGG CTATAAATGAACTGG ybhA 801653 - 800835 - | putative phosphatase pgl 801808 - 802803 + | 6-phosphogluconolactonase TERM 1133 802816 - 802839 + T 93 -15.3 -3.10053 | opp_overlap 802816 TAACCGCTGATTTAA CCGGCGCAG TCTCTC CTGCGCCGG TGTATTAACCTATCT TERM 1134 802839 - 802816 - T 93 -15.3 -3.06133 | opp_overlap 802816 TAACCGCTGATTTAA CCGGCGCAG TCTCTC CTGCGCCGG TGTATTAACCTATCT ybhD 803860 - 802844 - | putative DNA-binding transcriptional regulator TERM 1135 805007 - 805037 + G 71 -3.3 -4.81814 | opp_overlap 805007, overlap 805007 ACGACCAGAAAAATA TTTTCCGGTGAAG TTTAT CTTCCCTGAAAAA TTTTGTTGTCGTGAT ybhH 803981 - 805033 + | hypothetical protein TERM 1136 805093 - 805073 - f 87 -11.3 -3.69809 | TACTCAATAAAGGAA TTCTGTATG AGT CATACAGAA AGAACAGGATATTAA TERM 1137 805375 - 805387 + F 71 -4.8 -4.51799 | TTACTCTTCCGGTAC CACC TGGCT GGTG TTTTCTGCGTTTACT TERM 1138 806686 - 806709 + F 86 -13.2 -2.89055 | TCCATTTATTATCTT TCTGCGCACT TCAC GGTGCGCAGA TATCTGGAGCATTTG TERM 1139 806760 - 806746 - g 81 -7 -4.63184 | AAGTTATCTGAAAAA GGCGTG TTT CTCGCC AGCAATAACGAAATA TERM 1140 806838 - 806827 - g 100 -5.8 -5.71638 | opp_overlap 806827 GAAGAAGCAAAAAAA GGCA CTAT TGCC TGGTCTATTCTCTCT ybhJ 806725 - 808986 + | putative enzyme ybhC 810410 - 809127 - | pectin methylesterase TERM 1141 810555 - 810529 - R 86 -13.8 -2.53759 | opp_overlap 810526, overlap 810534 810536 AATACCTTTAAGTGA TACCAGATGGCA TTG CGCCATCTGGCA GAGTGATTAACTAAA ybhB 811038 - 810562 - | putative UPF0098 class protein bioA 812386 - 811097 - | 7,8-diaminopelargonic acid synthase, PLP-dependent TERM 1142 811412 - 811424 + g 76 -9.1 -3.78775 | opp_overlap 811412 811411 GCCAGATTCAAGAAT CGCCA GGC TGGCG TTTGCTGCTGCGCAG TERM 1143 813471 - 813445 - g 86 -10.8 -3.8591 | overlap 813448 GGCGATAACGAACAA CAGCAGCGTCTG GAG CAGGCGCTGATG ACCCCGGACACTGAC TERM 1144 813468 - 813448 - g 70 -11.1 -2.70018 | overlap 813445 GATAACGAACAACAG CAGCGTCTG GAG CAGGCGCTG ATGACCCCGGACACT bioB 812473 - 813513 + | biotin synthase TERM 1145 813682 - 813713 + G 79 -10.2 -3.84825 | gap 1, opp_overlap 813682 813685, overlap 813682 813685 GCCATCATCCGCAAA TT-ATCCGCGCCTGG CAG CAGGGCGCGGATCAA TTTGGTGTCGGTAGC TERM 1146 813712 - 813682 - g 81 -10.5 -3.58343 | gap 1, opp_overlap 813682 813682 813685, overlap 813685 GCCATCATCCGCAAA TTATCCGCG-CCTG GCAG CAGGGCGCGGATCA ATTTGGTGTCGGTAG TERM 1147 813682 - 813712 + G 75 -11.8 -2.90573 | opp_overlap 813682 813685, overlap 813682 813685 GCCATCATCCGCAAA TTATCCGCGCCTGG CAG CAGGGCGCGGATCA ATTTGGTGTCGGTAG TERM 1148 813685 - 813709 + G 81 -13.5 -2.69601 | opp_overlap 813685 813682, overlap 813682 813682 ATCATCCGCAAATTA TCCGCGCCTGG CAG CAGGGCGCGGA TCAATTTGGTGTCGG TERM 1149 813709 - 813685 - g 78 -12.2 -2.91873 | gap 1, opp_overlap 813682 813682 813685, overlap 813682 ATCATCCGCAAATTA TCCGCG-CCTG GCAG CAGGGCGCGGA TCAATTTGGTGTCGG bioF 813510 - 814664 + | 8-amino-7-oxononanoate synthase bioC 814651 - 815406 + | putative methltransferase, enzyme of biotin synthesis bioD 815399 - 816076 + | dethiobiotin synthetase TERM 1150 816872 - 816857 - g 72 -4.6 -4.63218 | opp_overlap 816858, overlap 816858 TTGCGCCCAACAAAA CGCTGG CGGC CCAGCT GTATGGCGAAATGAA TERM 1151 817414 - 817394 - g 70 -6.7 -4.14739 | CCATCTACCCGAAAA CGCACTACG TCA CGCCGCGCG AGCGCATCGTACAGG TERM 1152 817463 - 817453 - g 70 -6.8 -4.1421 | GAGATCAAAGAAGAA CTGG CCG CCAG ACGCAAAGTGCTGTT uvrB 816655 - 818676 + | excinulease of nucleotide excision repair, DNA damage recognition component TERM 1153 818714 - 818682 - T 78 -10.6 -3.21276 | opp_overlap 818685 818689, overlap 818685 818689 CGCGTCGTGACAAGA TGACGAAGCCGGAA TATTC TTCCGGCTTCGTGT TAACCTAAAGCCTGT TERM 1154 818711 - 818685 - T 100 -16.7 -2.80074 | opp_overlap 818685 818689, overlap 818682 818689 GTCGTGACAAGATGA CGAAGCCGGAA TATTC TTCCGGCTTCG TGTTAACCTAAAGCC TERM 1155 818685 - 818711 + T 100 -16.7 -3.05844 | opp_overlap 818685 818682 818689, overlap 818689 GTCGTGACAAGATGA CGAAGCCGGAA TATTC TTCCGGCTTCG TGTTAACCTAAAGCC TERM 1156 818707 - 818689 - T 76 -10.3 -3.29381 | opp_overlap 818685 818689, overlap 818685 818682 TGACAAGATGACGAA GCCGGAA TATTC TTCCGGC TTCGTGTTAACCTAA TERM 1157 818689 - 818707 + T 76 -10.3 -3.37245 | opp_overlap 818689 818685 818682, overlap 818685 TGACAAGATGACGAA GCCGGAA TATTC TTCCGGC TTCGTGTTAACCTAA ybhK 819622 - 818714 - | putative transferase with NAD(P)-binding Rossmann-fold domain; UPF0052 family moaA 820019 - 821008 + | molybdopterin biosynthesis protein A moaB 821030 - 821542 + | molybdopterin biosynthesis protein B moaC 821545 - 822030 + | molybdopterin biosynthesis, protein C moaD 822023 - 822268 + | molybdopterin synthase, small subunit moaE 822270 - 822722 + | molybdopterin synthase, large subunit ybhL 822859 - 823563 + | conserved hypothetical protein; putative inner membrane protein TERM 1158 823583 - 823601 + F 100 -8.1 -6.13503 | opp_overlap 823583 823581 TTTTCACCATCAATA TCCCGGC CATGT GTCGGGA TTTTTTTTCTTACTA ybhM 823769 - 824482 + | conserved hypothetical protein; putative inner membrane protein ybhN 825474 - 824518 - | conserved hypothetical protein; putative inner membrane protein TERM 1159 825223 - 825237 + g 90 -11.4 -3.86015 | opp_overlap 825213 825211 CGACACCAGCATCAC CTGGCG CTT CGCCAG TTTGTGACCGCAGTA ybhO 826715 - 825474 - | cardiolipin synthase 2 ybhP 827473 - 826712 - | putative metal-dependent hydrolase TERM 1160 827911 - 827953 + G 71 -9 -3.44848 | overlap 827911 827913 827916 AAACAACTTTGTGCT GGCGATTGCAGGGCTGGCAA TCC TTGCCGGCCCGGCGGTAGTG TCTTTGCTGGCGAAA TERM 1161 827913 - 827951 + G 95 -13.8 -3.29704 | overlap 827911 827911 827916 ACAACTTTGTGCTGG CGATTGCAGGGCTGGCAA TCC TTGCCGGCCCGGCGGTAG TGTCTTTGCTGGCGA TERM 1162 827916 - 827948 + G 85 -14.1 -2.82279 | overlap 827913 827911 827911 ACTTTGTGCTGGCGA TTGCAGGGCTGGCAA TCC TTGCCGGCCCGGCGG TAGTGTCTTTGCTGG ybhQ 827606 - 828016 + | conserved hypothetical protein; putative inner membrane protein ybhR 829084 - 827978 - | putative transporter subunit: permease component of ABC superfamily TERM 1163 828910 - 828944 + g 70 -10 -3.21912 | GTTCTACCGAGTGCT CGCCGTTATCTTCATC GTA GATGGCGATGGTGGCG TTGGTCACTTCCAGC ybhS 830228 - 829095 - | putative transporter subunit: permease component of ABC superfamily TERM 1164 829355 - 829330 - G 72 -6.2 -4.40358 | gap 2, opp_overlap 829335, overlap 829320 829317 829332 ATCGACGGCAGAAAA GCCGCGTTCAGG GCCA CCTGA--GCGGC GTTGAACTGGTTGCG ybhF 831957 - 830221 - | putative transporter fused subunits of ABC superfamily: ATP-binding components TERM 1165 831077 - 831061 - G 70 -5.1 -4.41302 | CAGCAAATCAATAAA CGCATCT TCA AAACGCG GCGTAGTTTCGTTGA TERM 1166 831717 - 831736 + g 81 -6.4 -4.7373 | gap 1, opp_overlap 831709 GCATATAGCCGAGCA CGGCG-TGC AGC GCAGCGTCG TTTTTGATCGGATCA ybhG 832948 - 831950 - | putative membrane fusion protein (MFP) component of efflux pump, membrane anchor; UPF0194 family TERM 1167 832125 - 832135 + g 72 -6.8 -4.15044 | ACGAAACCAATCTGC CCGT GAT ACGG TTTGTTCGGACGACC ybiH 833619 - 832948 - | putative DNA-binding transcriptional regulator TERM 1168 833562 - 833574 + g 81 -4.8 -5.09173 | opp_overlap 833548 ACTGTGCCAGTGCCG CAGC AATCA GCTG TTTTTTCGCCTGTTC TERM 1169 833632 - 833655 + H 74 -9.8 -3.36878 | CATCGCACAGTCCAT TCTTAATCAA ATGA TTGATTAAGA TTATGACTCCATAGG rhlE 833848 - 835209 + | RNA helicase TERM 1170 835328 - 835359 + TF 77 -10 -3.53012 | opp_overlap 835338, overlap 835329 GTGCATGTTTTTGTA GGCCGGATAAGGCG CTCG CGCCGCATCCGGCA TTTCACAACAAGCAC TERM 1171 835329 - 835358 + TF 86 -13.5 -2.71712 | opp_overlap 835338, overlap 835328 TGCATGTTTTTGTAG GCCGGATAAGGCG CTCG CGCCGCATCCGGC ATTTCACAACAAGCA ybiA 835747 - 835442 - | hypothetical protein TERM 1172 836001 - 835978 - gH 100 -8.8 -5.27779 | GCGAAGAGCAAAAAA CGCTGGTGGT AAGT ACCGCCAACG TGGCATTGCAGGATC dinG 835746 - 837896 + | ATP-dependent DNA helicase TERM 1173 837879 - 837892 + FH 72 -9.5 -3.25223 | opp_overlap 837875 AAAACGAAATCCCCA CGCCG TCGG CGGCG TTAATGATGTGAGTC TERM 1174 837952 - 837979 + G 71 -9.1 -3.53444 | gap 1, opp_overlap 837952 837950 837948 837971 AAATCATTAAAGAGA TCGGGCGCG-GG AAAAA CCACGCGCGCGA TTTAGACCGGGATAC ybiB 837924 - 838886 + | putative transferase/phosphorylase TERM 1175 838898 - 838921 + F 100 -12.5 -4.07568 | TTAATTTTTATCTCA GCCGGATGA GCCATG TCATCCGGC TTTTACCCCACCGCA ybiC 839027 - 840112 + | putative hydroxyacid dehydrogenase TERM 1176 840139 - 840118 - T 100 -13.7 -5.47821 | AGCCAGCTAAAAAAA GCCCGTCCA GTGG CGGACGGGC AAACAAGGGTAACAT TERM 1177 840275 - 840323 + T 83 -11.6 -3.37796 | opp_overlap 840273 840275 840276, overlap 840263 840276 GTAGGTCTGATAAGA CGCGGTAGCGTCGCATCAGGCA TCTGT TGCCGGATGCGGCGTAAACGCC TTATCCGTCCTACGA TERM 1178 840322 - 840276 - T 74 -10.7 -2.5294 | opp_overlap 840263 840275 840276, overlap 840273 840275 TAGGTCTGATAAGAC GCGGTAGCGTCGCATCAGGCA TCTGT TGCCGGATGCGGCGTAAACGC CTTATCCGTCCTACG TERM 1179 840276 - 840322 + T 89 -15.1 -2.62463 | opp_overlap 840273 840276 840275, overlap 840263 840275 TAGGTCTGATAAGAC GCGGTAGCGTCGCATCAGGCA TCTGT TGCCGGATGCGGCGTAAACGC CTTATCCGTCCTACG ybiJ 840600 - 840340 - | hypothetical protein TERM 1180 840416 - 840426 + g 74 -8.2 -3.8709 | TATCCACTGGCACCG GCCG CCG CGGC TTTCTCAGCCAGTTT TERM 1181 840473 - 840491 + g 71 -3.1 -4.79657 | overlap 840459 AGGGTGGATGCGCCA TCGGC AGAAACCAC GCCGA TTTTATTCATGTTCT TERM 1182 840650 - 840665 + r 83 -4 -5.40072 | overlap 840651 ACGTTGTTTCGTCGA TGTGAT GAGT ATCACG TTTTTTTACGAGAGA ybiI 841131 - 840865 - | hypothetical protein ybiX 841882 - 841205 - | conserved hypothetical protein with PKHD hydroxylase domain TERM 1183 841274 - 841284 + g 77 -8.2 -4.08767 | overlap 841272 GATCTCTTCACTTTC GCCG TAG CGGC TTTTCAGCGACTGAA TERM 1184 841916 - 841899 - R 100 -12.7 -4.58283 | opp_overlap 841896 CAAGTTCTCCAAAAA GTGGGGC CTGC GCCCCAC ACCGATTTTTAACAG fiu 844380 - 842098 - | putative TonB-dependent iron outer membrane transporter TERM 1185 842665 - 842685 + g 70 -3.9 -4.70879 | AACCTGCCATTTGGT GCCAATCTC GCT GGTGTTGGC TTTTTGCGGTTTAAA TERM 1186 843707 - 843722 + g 74 -2.4 -5.03145 | TTTTTGACTTTGTCG CGTCCG GCAT CGTGCG TTTTTTCGCCCATTA TERM 1187 844039 - 844029 - G 70 -6.8 -4.0371 | CACCGCGCATATAAA TGGC GTC GCCA GTGGTGGAGTTACCG TERM 1188 844090 - 844072 - G 81 -4.4 -5.03314 | opp_overlap 844080, overlap 844074 844076 CTCACCCGCAAAAAA CGCACCCA CGG CGGGGACG TTTTTGAGCGCGTCG TERM 1189 844475 - 844520 + r 76 -6.4 -4.52857 | gap 1, overlap 844476 ATCCCGTGATAGCGT CCGTG-CAAGTGATAATAATT TTGAT AAGTATTATCACTTGGCGCGA TTTTCTATCACCCAT TERM 1190 844476 - 844519 + r 74 -9.9 -3.31232 | gap 1, overlap 844475 TCCCGTGATAGCGTC CGTG-CAAGTGATAATAATT TTGAT AAGTATTATCACTTGGCGCG ATTTTCTATCACCCA TERM 1191 844630 - 844609 - R 74 -7.3 -4.29432 | opp_overlap 844609 CAAATCGGACGAAAA CTGCATCCA GAGG CGAATGCAG TTACGTTGGTGGGGT ybiM 845049 - 844645 - | hypothetical protein TERM 1192 844713 - 844731 + g 71 -3 -4.86033 | overlap 844714 TAATGACATAACCTT TCGCGC CTTGTTC GCGCGC TTTTTCTGCCAGTTT TERM 1193 844887 - 844897 + g 71 -3.2 -4.77036 | CGGTGGCAATCAGTA GTGT GAG GCAC TTTTTCATAATGACA TERM 1194 845407 - 845434 + G 72 -8.4 -3.71552 | gap 1 TCCCGGACGGTTTTC TCTGCCC-ACCAG TAC CGGGTCGGGCGGA TTATATTCATCACCT ybiN 845181 - 846107 + | putative AdoMet-dependent methyltransferase ybiO 848329 - 846104 - | hypothetical protein TERM 1195 848178 - 848191 + g 100 -4.5 -6.11243 | gap 1, overlap 848170 AGCACATCCGCCAGT GC-GCC ATA GGCCGC TTTTTTTTGTTCGAT glnQ 849168 - 848446 - | glutamine transporter subunit ; ATP-binding component of ABC superfamily glnP 849824 - 849165 - | glutamine transporter subunit ; membrane component of ABC superfamily glnH 850709 - 849963 - | glutamine transporter subunit ; periplasmic binding component of ABC superfamily TERM 1196 850895 - 850853 - R 83 -12.8 -3.06315 | opp_overlap 850860 850894, overlap 850844 850890 GCAATATCCTGAAGA TGCACCATTCTGGGGCACCA AAC TGGTGCGCTAAAATTGTGCA CTCAACACAGTGATT TERM 1197 850956 - 850937 - R 74 -3.6 -5.16237 | opp_overlap 850937 AACCTGATGAAAAAA CAATCTTT ATGT AACGATTG TGTGATGATGTGGAT TERM 1198 851050 - 851072 + r 80 -7.6 -4.52047 | opp_overlap 851051, overlap 851051 GGGCTACAAAACAAA ACGGCCTCCT GTC AGGAAGCCGC TTTTATCGTGTACTA TERM 1199 851051 - 851071 + r 80 -11.1 -3.30505 | opp_overlap 851051, overlap 851050 GGCTACAAAACAAAA CGGCCTCCT GTC AGGAAGCCG CTTTTATCGTGTACT TERM 1200 851071 - 851051 - R 100 -13.3 -5.18371 | opp_overlap 851051 851050 GGCTACAAAACAAAA CGGCCTCCT GTC AGGAAGCCG CTTTTATCGTGTACT dps 851616 - 851113 - | Fe-binding and storage protein TERM 1201 851520 - 851535 + g 87 -4.7 -5.29782 | TAACCTGGCGATTCA GCAAC TCTACT GTTGC TTTTTTCTCGCTGTC TERM 1202 851774 - 851788 + r 72 -5.8 -4.50627 | AGTTAGATATATTGA TAAGAA CAA TTCTTA TTTATTTGCTCGCTA TERM 1203 851905 - 851878 - R 100 -15.8 -4.45517 | opp_overlap 851874 AAAGTAGCGAGAAAA TCTGCATGGTTA TGCA TAACCATGCAGA AATGTAAATTTAATT rhtA 852802 - 851915 - | threonine and homoserine efflux system TERM 1204 852994 - 852978 - H 79 -9.5 -3.72315 | opp_overlap 852978 852977, overlap 852976 ATGACAGGGAAAACA TGCGTAA TAC TTACGCA GTTCTCTGAAAAAGT ompX 853155 - 853670 + | outer membrane protein TERM 1205 853692 - 853709 + T 100 -9.1 -6.09196 | opp_overlap 853692 CGGTGATATAAAAAA TCCGCCT CTCG GGGCGGA TTTTTTTGTTTTAAG TERM 1206 853709 - 853692 - T 100 -8.4 -5.36441 | opp_overlap 853692 CGGTGATATAAAAAA TCCGCC TCTCGG GGCGGA TTTTTTTGTTTTAAG ybiP 855303 - 853720 - | putative enzyme, UPF0141 family, inner membrane TERM 1207 854119 - 854144 + g 70 -4.7 -4.50159 | TAAATTGTCTGTTTG CGTCATGGTAT AGAG ATAGCACGACG TTTCTTTCGATTGCA TERM 1208 855274 - 855259 - G 71 -9 -3.55563 | AGTCCACGGGCTAAA TACCCG GCTA CGGGTA ACAAGCGATTCTTTG TERM 1209 855554 - 855577 + r 72 -8.1 -3.8709 | opp_overlap 855556, overlap 855556 ATAAAAGCAGGAGTG AAGCGGCGT ACCGCG ACGCCGCTA TTTATCGGAAGGTTT TERM 1210 855556 - 855575 + r 81 -10.7 -3.52113 | opp_overlap 855556, overlap 855554 AAAAGCAGGAGTGAA GCGGCGT ACCGCG ACGCCGC TATTTATCGGAAGGT TERM 1211 855575 - 855556 - R 76 -10.7 -3.12803 | opp_overlap 855556 855554 AAAAGCAGGAGTGAA GCGGCGT ACCGCG ACGCCGC TATTTATCGGAAGGT ECS88_0834 855703 - 855575 - | hypothetical protein mntR 855889 - 856356 + | DNA-binding transcriptional regulator of mntH TERM 1212 856614 - 856626 + G 70 -6.9 -4.04319 | ATGTTTATGGTACTG GCGGC AGC GCTGC TTTCTACCTTTCTGA ybiR 856353 - 857471 + | putative transporter TERM 1213 857490 - 857508 + T 86 -11 -4.13183 | opp_overlap 857490 CTGTCAAATTAAAAA GGCGGATT ATG AGTCCGCC TTTGCTTTACGTTTT TERM 1214 857508 - 857490 - T 91 -8.8 -4.98531 | opp_overlap 857490 CTGTCAAATTAAAAA GGCGGATT ATG AGTCCGCC TTTGCTTTACGTTTT ybiS 858449 - 857529 - | hypothetical protein ybiT 858668 - 860260 + | putative transporter fused subunits of ABC superfamily: ATP-binding components TERM 1215 860300 - 860265 - T 87 -14.3 -2.57244 | gap 1, opp_overlap 860268, overlap 860261 GGATCGAGTAAGTTA TTATCAGTAGCCCTGA TATGG TCAGGGCTACTGA-AA CTGATGACAAACGCA TERM 1216 860409 - 860398 - T 70 -7.2 -3.9392 | TTGTATGCCAAATAA GGCG GTCA CGCC GTATCCGGCATAATG ybiV 861275 - 860460 - | type II HAD phosphatase ybiW 863853 - 861421 - | putative glycyl radical cofactor protein TERM 1217 861708 - 861720 + g 71 -9.1 -3.53012 | opp_overlap 861706 CGCCGCCGAGAATTG CTGCC GTA GGCAG TTTACCCACCGAGCC TERM 1218 863370 - 863390 + g 71 -11.1 -2.87051 | overlap 863352 863369 CCAGGTGCGCATCGC CGGAGGTCA TAT TGCCCTCCG CTTTAATGATGCCGG TERM 1219 863404 - 863418 + g 71 -2.8 -4.77438 | opp_overlap 863400 CGCTTTAATGATGCC GGTC GCCAGCA GACC TTTTTGCTCATCGGT ybiY 864758 - 863859 - | putative AdoMet-dependent glycyl radical activating enzyme TERM 1220 864120 - 864137 + g 83 -5.5 -5.11033 | overlap 864121 GCGGATAATGATTTT TTTGCCG GCTG CGGCGAG TTTTTTCAGGTTATC fsaA 864889 - 865551 + | fructose-6-phosphate aldolase 1 TERM 1221 865535 - 865564 + T 70 -10.1 -2.6627 | gap 1, opp_overlap 865541, overlap 865529 865534 GGCAAGGAGCGTTTG GCAGAACGT-CGAT TTA ACCGGACGTTCTGC ATTCTCATAAATTGC TERM 1222 865584 - 865604 + T 81 -11.1 -3.50393 | TCATAAATTGCTGAT GACGTGGCG GAG TGCCGCGTC TTATCTGGCCTGGAG moeB 866376 - 865627 - | molybdopterin synthase sulfurylase TERM 1223 865715 - 865746 + g 79 -10.1 -3.79668 | opp_overlap 865707 TACATCACGATTTTT CCGCTGGCAGGTT TGCCAT AACCGGCCAGCAG TTTAATCGCTTCCAT moeA 867611 - 866376 - | molybdopterin biosynthesis protein TERM 1224 866720 - 866708 - G 78 -10.5 -3.53444 | TCAGCGTCGCTGAAA CCGGG TTG CCCGG CAGGCCGCAGAACCA TERM 1225 866914 - 866904 - G 72 -6.8 -4.15044 | GTCGGCTTCAATAAA TGCG GCG CGCA GGGCATGGGGATCGT TERM 1226 867078 - 867068 - G 87 -4.6 -5.252 | CACCGGTAGAAAAAA GCGC TAC ACGC ACTTTACGAATCACC TERM 1227 867520 - 867508 - G 78 -7.7 -4.36063 | AGAATACGACCAAAA CACTG AAC CAGTG GCAGCGTTTCCTGGG TERM 1228 868492 - 868480 - g 73 -9.1 -3.65224 | opp_overlap 868479 868480 ATGCTATGCCAATAA CGCCA GTG TGGCG GTTTCCTGTACCGGT iaaA 867815 - 868780 + | isoaspartyl dipeptidase with L-asparaginase activity TERM 1229 869295 - 869271 - g 77 -11.4 -3.15544 | opp_overlap 869267 869285 CGTTATCCGCATCAA CTCTCTGGCG GGATG CGCCAGCGAG TGATGATTGCGATGG yliA 868800 - 870638 + | putative peptide transport fused subunits of ABC superfamily: ATP-binding components TERM 1230 872126 - 872110 - g 71 -3 -4.82901 | gap 1, overlap 872112 CTGGTGGTAGAAAAA CTG-GTG TCGG CACACAG TAAAAACCTGACCGG yliB 870658 - 872196 + | putative peptide transporter subunit: periplasmic-binding component of ABC superfamily TERM 1231 872794 - 872808 + G 70 -7.1 -4.08064 | overlap 872779 872777 872776 CGCGCTTTACCCGCG CGTCG TTTGT CGACG TTTTAAGCGAAGATT TERM 1232 873039 - 873051 + G 70 -5.5 -4.42653 | TACCCGGTGATTCAG GCGGA AAT TCTGC TTTTCTCGCTGGAAT yliC 872214 - 873134 + | putative peptide transporter permease subunit: membrane component of ABC superfamily yliD 873137 - 874048 + | putative peptide transporter permease subunit: membrane component of ABC superfamily TERM 1233 874187 - 874159 - f 80 -7.4 -4.58283 | TAATTTGGTTAAAAA GCCGCAGCAA GGGACTATT TTGCAGCGGC ACAGCGTTCAGACAG TERM 1234 875742 - 875715 - g 70 -5.5 -4.431 | GAGTTACGCAGAAAA GCTGAAACTGG CGATTT CCAGTATCCGC AACCATATGTTCTCA TERM 1235 876172 - 876159 - g 71 -2.3 -4.95484 | opp_overlap 876164 CATCATGAAAGAAAA TGGCC TGAA GGCGA ACAGCCTTTGTGTTG yliE 874225 - 876573 + | conserved hypothetical protein; putative inner membrane protein TERM 1236 876612 - 876623 + G 79 -4.4 -4.95806 | overlap 876621 AATTCGTACTTACAG TCAG TCTG CTGA TTTTTATCATGATTT yliF 876581 - 877909 + | putative diguanylate cyclase TERM 1237 877958 - 877910 - T 72 -9.8 -3.1505 | gap 1, opp_overlap 877894 877918 877922, overlap 877913 ATTAGCTGGCAGTAA TCATTATTCGCAGGCCGGACAAA TGAT TTTGCCCGGCCTG-AATTAATTA AACCCGGCTACCCCA TERM 1238 877955 - 877913 - T 77 -11.5 -2.78018 | gap 1, opp_overlap 877918 877922, overlap 877910 AGCTGGCAGTAATCA TTATTCGCAGGCCGGACAAA TGAT TTTGCCCGGCCTG-AATTAA TTAAACCCGGCTACC TERM 1239 877918 - 877951 + T 74 -9.5 -3.33696 | opp_overlap 877913 877910, overlap 877922 GCAGTAATCATTATT CGCAGGCCGGACAAA TGAT TTTGCCCGGCCTGAA TTAATTAAACCCGGC TERM 1240 877922 - 877947 + T 84 -13.3 -2.60244 | opp_overlap 877913 877910, overlap 877918 TAATCATTATTCGCA GGCCGGACAAA TGAT TTTGCCCGGCC TGAATTAATTAAACC yliG 879281 - 877956 - | putative AdoMet-dependent methyltransferase, UPF0004 family TERM 1241 879261 - 879249 - G 90 -9.1 -4.50159 | GCCAAGGGAAACAAA GCCGA TTT TCGGC TGGGGAGTTACTTTG bssR 879494 - 879877 + | biofilm regulator TERM 1242 879873 - 879917 + F 75 -5 -4.84359 | opp_overlap 879881 879885, overlap 879881 879882 879885 CCATGCTTGAGAAGG CCTGAAAACTAAGGGGGAGA AAGCG TCTCCCCCTTCATGTTTAAG TTTTTGTAAAAATGA TERM 1243 879909 - 879881 - f 81 -9.6 -4.12198 | opp_overlap 879873 879881 879882 879885, overlap 879885 GAGAAGGCCTGAAAA CTAAGGGGGAGA AAGCG TCTCCCCCTTCA TGTTTAAGTTTTTGT TERM 1244 879882 - 879909 + F 75 -9.3 -3.59063 | gap 1, opp_overlap 879881 879885, overlap 879881 879873 879885 AGAAGGCCTGAAAAC T-AAGGGGGAGA AAGCG TCTCCCCCTTCA TGTTTAAGTTTTTGT TERM 1245 879885 - 879905 + F 93 -12.6 -3.48703 | opp_overlap 879885 879881, overlap 879882 879881 879873 AGGCCTGAAAACTAA GGGGGAGA AAGCG TCTCCCCC TTCATGTTTAAGTTT TERM 1246 879905 - 879885 - f 95 -12.6 -3.67175 | opp_overlap 879882 879881 879873 879885, overlap 879881 AGGCCTGAAAACTAA GGGGGAGA AAGCG TCTCCCCC TTCATGTTTAAGTTT TERM 1247 880453 - 880465 + G 77 -2.7 -5.16841 | CGGATGGTATTTGAC GGTAA AGG TTATC TTTTTATTGCTCTGG TERM 1248 880749 - 880734 - g 71 -2.4 -4.92239 | overlap 880738 GCAAAAAGGCAAAAA CTACGG CTGG CCGCTG GCAACCTGGGGAATC yliI 879988 - 881103 + | PQQ-dependent aldose sugar dehydrogenase precursor (asd) yliJ 881726 - 881100 - | putative glutathione S-transferase TERM 1249 882005 - 882020 + G 87 -4.7 -5.30199 | TCTCCTTCGTGGTCT TGCAG CGGGTT CTGCA TTTTTATTCCTTTTT dacC 881973 - 883175 + | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6a) TERM 1250 883187 - 883211 + T 100 -13.6 -3.39862 | opp_overlap 883187 TTAATCTTCTGATAA CCGGATGGCG CGAAA CGTCATCCGG TTATACGTCATTAAT TERM 1251 883211 - 883187 - T 85 -12.1 -3.30159 | opp_overlap 883187 TTAATCTTCTGATAA CCGGATGGCGC GAA ACGTCATCCGG TTATACGTCATTAAT deoR 883980 - 883222 - | DNA-binding transcriptional repressor TERM 1252 883732 - 883743 + g 79 -3.6 -5.06414 | overlap 883734 CGTCGCAGCCAGTTT TGCC GCCC GGCG TTTTTCTTCCACCAG ybjG 884634 - 884038 - | undecaprenyl pyrophosphate phosphatase TERM 1253 884416 - 884406 - G 72 -5.4 -4.56597 | overlap 884408 GGTCGTGCGGAAAAA GATG TCC CATC GTCCAGGACACAAAC cmr 884919 - 886151 + | multidrug efflux system protein TERM 1254 886183 - 886157 - T 100 -10.9 -5.47399 | opp_overlap 886157 CGAAGGGTAAAAAAA TGCCTGATTGC TTTGT GCGATCAGGCA TTCTCGAATTAATGG TERM 1255 886157 - 886183 + T 95 -13.1 -3.37464 | opp_overlap 886157 CGAAGGGTAAAAAAA TGCCTGATTGC TTTGT GCGATCAGGCA TTCTCGAATTAATGG ybjH 886458 - 886192 - | hypothetical protein ybjI 887358 - 886543 - | putative phosphatase ybjJ 888566 - 887358 - | putative transporter TERM 1256 888146 - 888133 - G 71 -3.1 -4.85599 | gap 1, opp_overlap 888144 CCCAGGCTATAAAAA CCG-TG CAT CATCGG TAAAACCGTCTTATT ybjK 888650 - 889186 + | putative DNA-binding transcriptional regulator TERM 1257 889248 - 889212 - T 88 -3.7 -5.4833 | TCAGGCAACAAAAAA CCCATCAACCTTG AACCGAAATGG CGGGGTTGATGGG CTCCACAAAATGGGG TERM 1258 889307 - 889277 - T 72 -3.3 -4.97158 | gap 1, opp_overlap 889304 GGACATCAAAGAAAA GCAGTGGCACTAAT TAAG ACTGATGCC-CTGC GGAAAAGTTCTGCGG ybjL 891046 - 889361 - | putative transporter TERM 1259 889945 - 889931 - G 83 -10 -4.09108 | opp_overlap 889930 889929 889927 GTGAATCGAGATAAA GCCGAT GCG ATCGGC GATGGTTTTTACGCG TERM 1260 890211 - 890250 + g 72 -7.8 -3.85817 | GGATCGAGTCGTGCG TGGGCGTCGGGATAGCCT ACCA ACGCTATTTCATCGCCCA TTTGTAGCACAGCAT ybjM 891316 - 891693 + | conserved hypothetical protein; putative inner membrane protein TERM 1261 891719 - 891687 - T 81 -3.3 -5.40625 | opp_overlap 891695, overlap 891695 ACAGCACAGAAAAAA TCAATAAAGCCCTCA ACG CGAGGGCTTGTCAGA CGATCAGGCGTCCAG TERM 1262 891695 - 891711 + T 74 -9.4 -3.29511 | opp_overlap 891687 891695 GAAAAAATCAATAAA GCCCTC AACGC GAGGGC TTGTCAGACGATCAG TERM 1263 891711 - 891695 - T 89 -10.1 -4.54301 | opp_overlap 891695, overlap 891687 GAAAAAATCAATAAA GCCCTCA ACG CGAGGGC TTGTCAGACGATCAG grxA 891980 - 891723 - | glutaredoxin 1, redox coenzyme for ribonucleotide reductase (RNR1a) ybjC 892140 - 892427 + | conserved hypothetical protein; putative inner membrane protein nfsA 892411 - 893133 + | nitroreductase A, NADPH-dependent, FMN-dependent TERM 1264 893658 - 893711 + G 76 -11 -3.27475 | gap 1, opp_overlap 893678, overlap 893656 893659 893678 TGTCGTGCTGGCGGA GACGCG-TCAGGCGGCCGAAAGCGT GATTG ACGCTTTCCGCGGTCTGAACGCGCA TATTCTGGTGCAGGA TERM 1265 893659 - 893710 + G 90 -14.5 -2.56271 | gap 1, opp_overlap 893678, overlap 893658 893656 893678 GTCGTGCTGGCGGAG ACGCG-TCAGGCGGCCGAAAGCGT GATTG ACGCTTTCCGCGGTCTGAACGCGC ATATTCTGGTGCAGG rimK 893194 - 894096 + | ribosomal protein S6 modification protein ybjN 894184 - 894660 + | hypothetical protein TERM 1266 894712 - 894665 - f 74 -10.6 -2.61264 | gap 1, opp_overlap 894668 894668, overlap 894664 TCCTCCACTGATAAC TCCTTTCGAGCACGCAGTCGCTG CCG CAGTGACTGCGTGC-CGCAAAAT TATCCGCTGTTTTTA TERM 1267 894668 - 894710 + F 100 -17.3 -2.62851 | opp_overlap 894665 894664, overlap 894668 TCCACTGATAACTCC TTT-CGAGCACGCAGTCGCTG CCG CAGTGACTGCGTGC-CGCAAA ATTATCCGCTGTTTT TERM 1268 894668 - 894711 + F 100 -14 -3.39892 | gap 1, opp_overlap 894665 894664, overlap 894668 TCCACTGATAACTCC TTTCGAG-CACGCAGTCGCTG CCG CAGTGACTGCGTGCCGCAAAA TTATCCGCTGTTTTT TERM 1269 894897 - 894908 + F 71 -4.4 -4.63218 | AGCAGTGCAGGCCGG GAGA GAGT TCTC TTTTCTTACACCGCG TERM 1270 895979 - 895967 - g 72 -6.9 -4.20918 | GCTAACGCCAATAAA GCAGC CAC GCCGC TGGTGAGTGCGGAAG potF 895010 - 896122 + | putrescine transporter subunit: periplasmic-binding component of ABC superfamily TERM 1271 896784 - 896765 - g 73 -3.5 -4.82901 | CGCGCTGGATAAAAA GCTGCGT GACCGG ATGCAGC TTGAAGTGGTGGATA potG 896319 - 897350 + | putrescine transporter subunit: ATP-binding component of ABC superfamily potH 897360 - 898313 + | putrescine transporter subunit: membrane component of ABC superfamily TERM 1272 898851 - 898861 + G 85 -3.2 -5.37345 | ATCTCGGTGCGACGC CGCT GAA AGTG TTTTTTGTCATTACG potI 898310 - 899155 + | putrescine transporter subunit: membrane component of ABC superfamily TERM 1273 899185 - 899209 + F 95 -12.2 -4.25104 | opp_overlap 899188, overlap 899188 GCCAACCTGGCTACA TAATGCCGCG CATGT CGCGGCATTG TTTTCATGGAAGACG TERM 1274 899188 - 899206 + F 95 -11.7 -4.25256 | opp_overlap 899188, overlap 899185 AACCTGGCTACATAA TGCCGCG CATGT CGCGGCA TTGTTTTCATGGAAG TERM 1275 899206 - 899188 - f 88 -11.7 -3.48772 | opp_overlap 899188 899185 AACCTGGCTACATAA TGCCGCG CATGT CGCGGCA TTGTTTTCATGGAAG ybjO 899215 - 899703 + | conserved hypothetical protein; putative inner membrane protein TERM 1276 900143 - 900159 + G 70 -4.3 -4.48741 | opp_overlap 900132, overlap 900144 GAAAGCCAGAGCGAT GGCGGCA TGA TGCTGCG TTTTGTACTGCGTTC rumB 899744 - 900871 + | 23S rRNA m(5)U747 methyltransferase TERM 1277 900889 - 900876 - T 100 -9.5 -5.5604 | opp_overlap 900876 TGAAGCAATAAAAAA GCCGC AGGT GCGGC TTTCTGAATCTTACT TERM 1278 900876 - 900889 + T 81 -9.5 -3.98172 | opp_overlap 900876 TGAAGCAATAAAAAA GCCGC AGGT GCGGC TTTCTGAATCTTACT artJ 901631 - 900900 - | arginine transporter subunit ; periplasmic-binding component of ABC superfamily TERM 1279 901168 - 901183 + g 75 -4.7 -4.86621 | opp_overlap 901168 AAGGCATTCTGATAA CTGTC ATAGGA GACAG TTTTTACTTCCGGGT TERM 1280 901249 - 901273 + g 77 -7.2 -4.46757 | opp_overlap 901249 TTTTCCATCCCAATA CGTTTGCC TTTCAGATC GGCAAACG TTTTGTAGGTATCTT TERM 1281 901779 - 901753 - R 100 -8 -5.69793 | opp_overlap 901753 ATATGAAATAAAAAA GACGGACAGC TTAGTGG GTTGTCCGTC TTCATAATAAGAATT TERM 1282 901753 - 901779 + r 81 -11.6 -3.21595 | opp_overlap 901753 ATATGAAATAAAAAA GACGGACAGCTT AGT GGGTTGTCCGTC TTCATAATAAGAATT artM 902524 - 901856 - | arginine transporter subunit ; membrane component of ABC superfamily artQ 903240 - 902524 - | arginine transporter subunit ;membrane component of ABC superfamily TERM 1283 903196 - 903186 - G 74 -8.2 -3.99898 | opp_overlap 903192, overlap 903187 CAATCAATGCACAAA CGGC AAG GCCG ACGGTCATCCCGGCG artI 903978 - 903247 - | arginine transporter subunit ; periplasmic-binding component of ABC superfamily artP 904724 - 903996 - | arginine transporter subunit ; ATP-binding component of ABC superfamily TERM 1284 904911 - 904883 - H 79 -9 -3.96148 | gap 1, opp_overlap 904883 904882 904904 904905, overlap 904904 GTCGGCGAGCATAAA TGT-CGGCATTCC TCAC GAAATGCCGTACA ATTTACGGGGTTTAT TERM 1285 905222 - 905247 + H 70 -7.5 -3.92373 | TGACTATTATCGCGG CTGGCATCGCT AAGT AGGGTTGCCAG TTTGTCACTCAAATA ybjQ 905582 - 905905 + | hypothetical protein ybjR 905902 - 906732 + | putative cell wall amidase and lipoprotein ybjS 907742 - 906729 - | putative NAD(P)H-binding oxidoreductase with NAD(P)-binding Rossmann-fold domain TERM 1286 906865 - 906893 + g 78 -8 -4.30978 | TCAAAATTCAACTTG GAGACGCCGTAG TGGGT CAGCGGCGGCTC TTTTGCTGACTTGCG ybjT 909271 - 907841 - | conserved hypothetical protein; putative NAD(P)-binding Rossmann-fold domain TERM 1287 907963 - 907937 - G 70 -5.9 -4.29049 | gap 1, overlap 907934 907938 TAACCAGTAAAACAA CCCTGGCATACC GTGC GG-ATGCCAGAA TGCGCGAACATCGAT TERM 1288 908358 - 908371 + g 84 -3.8 -5.20606 | TCATATCCCCAGTCG CTGG AGTTGA CCAG TTTTTCTTCCTCTTT ltaE 910283 - 909282 - | L-allo-threonine aldolase, PLP-dependent poxB 912038 - 910320 - | pyruvate dehydrogenase (pyruvate oxidase), thiamin-dependent, FAD-binding TERM 1289 912161 - 912136 - R 85 -11.9 -3.38581 | overlap 912134 ACTAACGGTTAAATA GCCCGATGAAA GGAA TATCATCGGGC ATCAGGCGATTATGC hcr 913139 - 912171 - | HCP oxidoreductase, NADH-dependent TERM 1290 912777 - 912765 - G 70 -10.5 -2.71119 | overlap 912764 ACGCATCGACATAAT CGGCG TGA CGCCG CAGCCTGCCGCCAGC hcp 914803 - 913151 - | hybrid-cluster [4Fe-2S-2O] protein in anaerobic terminal reductases TERM 1291 914977 - 914962 - RH 72 -3.2 -4.99035 | overlap 914964 TTATGCAGAGAAAAA GGCGAT GAGA ATCGGC ACTAACAGACTAAGA ybjE 915846 - 914947 - | putative transporter ECS88_0896 915824 - 915973 + | hypothetical protein TERM 1292 916068 - 916019 - TR 100 -18.5 -4.06491 | gap 1 GCAATGCCATATAAA GCCACTGGCGCAGGGAGCGGCCAG TCG CCG-CCGCCCCCTGCACCCCCGGC CTTCGGGGAACGCCT aqpZ 916862 - 916167 - | aquaporin TERM 1293 917194 - 917234 + H 78 -10.5 -3.70068 | opp_overlap 917207 917208, overlap 917195 CATTTTTCAGACATT TGCCATGCTTAAATGTGAT GTC ATCACGTATTAGCATGGCC TTTCCCGTTATACTG TERM 1294 917195 - 917233 + H 86 -14 -2.81559 | opp_overlap 917207 917208, overlap 917194 ATTTTTCAGACATTT GCCATGCTTAAATGTGAT GTC ATCACGTATTAGCATGGC CTTTCCCGTTATACT ybjD 917288 - 918946 + | conserved hypothetical protein; putative nucleoside triphosphate hydrolase domain ybjX 919935 - 918943 - | hypothetical protein TERM 1295 918968 - 919017 + g 90 -6.6 -5.14965 | gap 3, overlap 918970 918971 AACATCGTGGCCATT TGTGGCTGAATAGCGTCGAGCATCT CAT AGC-GC-CGACGGTATTCAGCC-CG TTTTTTACTGGCGAT TERM 1296 918971 - 919015 + g 73 -11.6 -2.80472 | gap 2, overlap 918970 918968 ATCGTGGCCATTTGT GGCTGAATAGCGTCGAGCATCT CAT AGC-GC-CGACGGTATTCAGCC CGTTTTTTACTGGCG TERM 1297 919776 - 919765 - G 71 -3 -4.7373 | CGAGCGCAGCAAAAA TTTC TGGC GAAA ACTACGGCGATGCCA macA 920050 - 921165 + | macrolide transporter subunit, membrane fusion protein (MFP) component TERM 1298 921390 - 921428 + G 72 -4.6 -4.65263 | gap 3, overlap 921395 GTTGCCACGCTGGAC GCCG--ATGCGC-TGGCGC AACT GCGCCGCGAGCATTTCGGC TTTATTTTCCAGCGT TERM 1299 922197 - 922185 - g 84 -7.7 -4.66163 | overlap 922189 ATCGCCATCCAAAAA CAACC GTG GGTTG CCTCTGCCACGCCCG TERM 1300 922429 - 922461 + G 85 -13.5 -3.25823 | ATGTGGTTGGCGAGG TGATTCTGGTCGGCA ATA TGCCCGCCAGAGTCA TTGGTGTGGCGGAAG macB 921162 - 923108 + | fused macrolide transporter subunits of ABC superfamily: ATP-binding component ; membrane component TERM 1301 923144 - 923124 - T 100 -12.6 -4.96848 | opp_overlap 923124 TTTTTGAGATAAAAA TGCCAGCC GATCG GGCTGGCA TTTTGCCTTTAGGAT TERM 1302 923124 - 923144 + T 100 -12.6 -4.35926 | opp_overlap 923124 TTTTTGAGATAAAAA TGCCAGCC GATCG GGCTGGCA TTTTGCCTTTAGGAT cspD 923405 - 923181 - | cold shock protein homolog TERM 1303 923840 - 923850 + G 77 -6.8 -4.45738 | opp_overlap 923840 TCAATGATGATTATA CTCC GAT GGAG TTTGTTATTGACGTG clpS 923728 - 924048 + | regulatory protein for ClpA substrate specificity TERM 1304 924056 - 924043 - f 86 -8.1 -4.85599 | TGTACGCTAGAAAAA GCCTG AATG CAGGC ATAAAAATTGGGGGA TERM 1305 924751 - 924740 - g 70 -7.2 -4.07568 | CTGGTGTCGGTAAAA CCGC GATT GCGG AGGGGCTTGCATGGC TERM 1306 926261 - 926221 - g 90 -6.8 -5.11033 | opp_overlap 926223 GACAACCTGAAAAAA CCGCTCGCCAACGAAC TGCTGTTTG GTTCGCTGGTGGACGG CGGTCAGGTCACCGT clpA 924079 - 926355 + | ATPase and specificity subunit of ClpA-ClpP ATP-dependent serine protease, chaperone activity TERM 1307 926381 - 926408 + F 100 -10.6 -5.38054 | AGGTAGGTTGGTTAA GTCCGTGATCTC GTCA GGGGTTACGGAC TTTTTATTTATGGGG TERM 1308 927068 - 927050 - f 73 -4.6 -4.78848 | opp_overlap 927054, overlap 927054 CCTTCAAATATAAAA TAATCACA GGA TGTGTTTA TGTCTTCGAATTACC ECS88_0905 927062 - 928051 + | conserved hypothetical protein, CRISPR-associated protein TERM 1309 928927 - 928894 - g 90 -9.5 -4.56775 | gap 1, opp_overlap 928894 928911 AGCTGGCGGGAAAAA GCGCGTCAGATAGCCC GCC GGGCAAGC-AACGCGC TCGGTTTAAAGACAT TERM 1310 930971 - 930984 + G 79 -2.3 -5.29782 | overlap 930970 930971 TTCGTTATTCCCCTT TGCCG GAGG CGGTG TTTTTTCTGCATATG TERM 1311 931116 - 931135 + G 90 -7.8 -4.75309 | CGTCGCTTGCTGGGG CGTGATGG ATTA CCAACACG TTTTGTTGAATTTAG ECS88_0906 928048 - 931281 + | putative CRISPR-associated helicase TERM 1312 931462 - 931472 + F 74 -5.4 -4.64048 | opp_overlap 931461 931462, overlap 931461 TCTTTTAGAAGATAT CTCT AGG AGAG TTTGTTTGTGTGATC TERM 1313 932860 - 932844 - g 86 -6.5 -5.06414 | opp_overlap 932844 932846, overlap 932847 GCTGTCGAACAAAAA GAGTGGC GCA GCCAGTC TCTGTTCGCTCAACG ECS88_0907 931611 - 932918 + | conserved hypothetical protein CRISPR-associated TERM 1314 933334 - 933347 + F 71 -4.5 -4.72986 | gap 1, overlap 933333 CAGCATTGTCAGTAT GC-GCG ATC CGCAGC TTTTTCATGCGCCTG ECS88_0910 933849 - 934850 + | conserved hypothetical protein CRISPR-associated ECS88_0911 934819 - 935415 + | conserved hypothetical protein CRISPR-associated TERM 1315 935435 - 935456 + T 86 -7.9 -4.82901 | overlap 935434 935433 TTGCAATTTTTAACA GGCCTGGCC ATGT GGTTGGGCC TTTTTATGCGCGCCA TERM 1316 935512 - 935493 - T 100 -10 -5.71712 | opp_overlap 935493 935491 CCGCATACAAAAAAA GCCCGTAC TTTC GTACGAGC TCTTCTTTAAAGATG TERM 1317 936398 - 936414 + T 79 -7.9 -4.40037 | opp_overlap 936398 CATAGACGCAAAAAA GGCCGGT TAA ACCGACC TTTTACTCATTCTTT TERM 1318 936414 - 936398 - T 93 -10.1 -5.14477 | opp_overlap 936398 CATAGACGCAAAAAA GGCCGGT TAA ACCGACC TTTTACTCATTCTTT infA 936675 - 936457 - | translation initiation factor IF-1 aat 937664 - 936960 - | leucyl/phenylalanyl-tRNA-protein transferase cydC 939427 - 937706 - | fused cysteine transporter subunits of ABC superfamily: membrane component ; ATP-binding component cydD 941194 - 939428 - | fused cysteine transporter subunits of ABC superfamily: membrane component ; ATP-binding component TERM 1319 941155 - 941170 + g 72 -6.2 -4.40561 | TGACGCTTTGCTGTT TTAACC AGCG GGTTAA TTCTTTTTGACGGGA TERM 1320 941291 - 941257 - R 83 -6.5 -5.06103 | gap 1, opp_overlap 941258 941261, overlap 941261 ACAACGGGGAAAAAA TAAAGGCGAC-CCATA GTCG CATGGTGTCGCCTTCT TTACTTTTGTTACTG TERM 1321 941258 - 941290 + r 77 -7.1 -4.33854 | gap 1, opp_overlap 941257 941261, overlap 941261 CAACGGGGAAAAAAT AAAGGCGAC-CCAT AGTCGC ATGGTGTCGCCTTC TTTACTTTTGTTACT TERM 1322 941287 - 941261 - R 93 -9.5 -5.04249 | gap 1, opp_overlap 941258 941261, overlap 941257 CGGGGAAAAAATAAA GGCGAC-CCATA GTCG CATGGTGTCGCC TTCTTTACTTTTGTT TERM 1323 941261 - 941287 + r 80 -8.8 -4.25231 | gap 1, opp_overlap 941261 941257, overlap 941258 CGGGGAAAAAATAAA GGCGAC-CCAT AGTCGC ATGGTGTCGCC TTCTTTACTTTTGTT trxB 942282 - 941317 - | thioredoxin reductase, FAD/NAD(P)-binding TERM 1324 942145 - 942162 + g 81 -6.9 -4.66163 | overlap 942132 TTCCACTTCCGTGGT GGTGGTC AGTT GGCCGCC TTTTTCCATGCCGGT lrp 942826 - 943320 + | DNA-binding transcriptional dual regulator, leucine-binding TERM 1325 943374 - 943410 + F 78 -8.8 -4.13767 | gap 1, opp_overlap 943376 943380, overlap 943377 943380 TCCTGTTAATCCATA CAG-CAACAGTACTGGG GTAA CCTGGTACTGTTGTCCG TTTTAGCATCGGGCA TERM 1326 943377 - 943406 + F 86 -13.7 -2.75577 | opp_overlap 943376 943380, overlap 943374 943380 TGTTAATCCATACAG CAACAGTACTGGG GTAA CCTGGTACTGTTG TCCGTTTTAGCATCG TERM 1327 943380 - 943403 + F 75 -9.6 -3.52113 | opp_overlap 943380 943376, overlap 943377 943374 TAATCCATACAGCAA CAGTACTGGG GTAA CCTGGTACTG TTGTCCGTTTTAGCA TERM 1328 945202 - 945165 - g 74 -3.2 -5.00616 | opp_overlap 945171 945176, overlap 945166 945167 945169 TCTGGTGTGAAAAAA GCGACACTGGCGACGG GGGCTG CCGCAACCGTTGCCGC GCCAGTCTTCAGTCT ftsK 943455 - 947498 + | DNA-binding membrane protein required for chromosome resolution and partitioning TERM 1329 947514 - 947543 + F 85 -12.1 -3.32698 | opp_overlap 947522, overlap 947512 TTAATGCAACGTAGG CCGGATAAGACGC GATA GCGTCGCATCCGG TATTCTATCAACTGA lolA 947654 - 948268 + | chaperone for lipoproteins ycaJ 948279 - 949622 + | recombination protein serS 949713 - 951005 + | seryl-tRNA synthetase, also charges selenocysteinyl-tRNA with serine TERM 1330 950998 - 951012 + F 70 -2.8 -4.89852 | opp_overlap 950998 ACGGACTGGAATATA TTGGCT AAT ACCCAA TTTTTCTGAATCTAA TERM 1331 951044 - 951031 - f 91 -9.5 -4.74103 | opp_overlap 951031 TTCTGAATCTAAAAA GCGCC TGCG GGCGC TTTTTTTGTCTCCCT TERM 1332 951031 - 951044 + F 100 -9.5 -5.72616 | opp_overlap 951031 TTCTGAATCTAAAAA GCGCC TGCG GGCGC TTTTTTTGTCTCCCT dmsA 951244 - 953688 + | dimethyl sulfoxide reductase, anaerobic, subunit A dmsB 953699 - 954316 + | dimethyl sulfoxide reductase, anaerobic, subunit B dmsC 954318 - 955181 + | dimethyl sulfoxide reductase, anaerobic, subunit C TERM 1333 955188 - 955214 + T 79 -5.1 -5.04733 | gap 1, opp_overlap 955192, overlap 955189 955192 GCAAGTTAATCAGTA AC-AACCGGGGT TTCG GCCCCGGTTCGC TTTTATTTCTGCTTC TERM 1334 955189 - 955213 + T 72 -8.6 -3.61213 | gap 1, opp_overlap 955192, overlap 955188 955192 CAAGTTAATCAGTAA C-AACCGGGGT TTCG GCCCCGGTTCG CTTTTATTTCTGCTT TERM 1335 955192 - 955209 + T 77 -10.5 -3.49818 | opp_overlap 955192, overlap 955189 955188 GTTAATCAGTAACAA CCGGGGT TTCG GCCCCGG TTCGCTTTTATTTCT TERM 1336 955209 - 955192 - T 79 -9.8 -3.77722 | opp_overlap 955192 955189 955188 GTTAATCAGTAACAA CCGGGG TTTCGG CCCCGG TTCGCTTTTATTTCT ycaC 955843 - 955217 - | putative hydrolase ycaD 956157 - 957305 + | putative MFS-type transporter protein TERM 1337 957347 - 957316 - T 91 -13.2 -3.26596 | opp_overlap 957316, overlap 957311 TGTAAATGAATTCAA GCAGAGTGTGAA CTTACTGT TTCACACTCTGC TTTTCTGTGCACAAA TERM 1338 957316 - 957347 + T 100 -13.2 -4.52589 | opp_overlap 957316 957311 TGTAAATGAATTCAA GCAGAGTGTGAA CTTACTGT TTCACACTCTGC TTTTCTGTGCACAAA TERM 1339 957389 - 957366 - T 100 -15.4 -5.24129 | opp_overlap 957366 TCTGTGCACAAAAAA GCGGCAACTT AATA AAGTTGCCGC TTTACGGGGAAATTA TERM 1340 957366 - 957389 + T 100 -15.4 -3.53761 | opp_overlap 957366 TCTGTGCACAAAAAA GCGGCAACTT AATA AAGTTGCCGC TTTACGGGGAAATTA pflA 958142 - 957402 - | pyruvate formate lyase activating enzyme 1 TERM 1341 957466 - 957488 + g 72 -6.3 -4.34263 | overlap 957467 TCCATGGTCTCTTTC TTCGGTGGT TTAAC ACCATCGAG TTTGTATTCTTCACC TERM 1342 957837 - 957820 - G 71 -2.7 -4.75219 | gap 1 TAACGACGAACAAAA CCGT-TGG TGT CCAGACAG GTATGAATGCCTTCT TERM 1343 957965 - 957948 - G 72 -7.7 -3.87869 | opp_overlap 957948 GGAAGCGTTCATAAA GTGGCGA TAGG TCACCAC TTCCTTCATCAAATC TERM 1344 958259 - 958303 + r 83 -7.2 -4.80882 | gap 1, opp_overlap 958272, overlap 958260 958272 TGACAAAAAAGGCTC TCGTGCTAAAAAAGGCCCCAC TTTC GTGGAGCCTTTATT-GTACGC TTTTTACTGTACGAT TERM 1345 958260 - 958302 + r 81 -10.7 -3.47806 | gap 1, opp_overlap 958272, overlap 958259 958272 GACAAAAAAGGCTCT CGTGCTAAAAAAGGCCCCAC TTTC GTGGAGCCTTTATT-GTACG CTTTTTACTGTACGA TERM 1346 958272 - 958291 + r 85 -9.2 -4.33851 | opp_overlap 958272, overlap 958260 958259 TCTCGTGCTAAAAAA GGCCCCAC TTTC GTGGAGCC TTTATTGTACGCTTT TERM 1347 958291 - 958272 - R 100 -11.4 -5.00616 | opp_overlap 958260 958259 958272 TCTCGTGCTAAAAAA GGCCCCAC TTTC GTGGAGCC TTTATTGTACGCTTT pflB 960616 - 958334 - | pyruvate formate lyase I focA 961528 - 960671 - | formate transporter TERM 1348 961883 - 961859 - R 71 -7.8 -3.78962 | opp_overlap 961860, overlap 961860 GCAAATATATGTAAA GCGGGGCATT AAAAA AACGCCCCGT AATATAACTCAGACG TERM 1349 961882 - 961860 - R 78 -11.3 -2.86654 | opp_overlap 961860, overlap 961859 CAAATATATGTAAAG CGGGGCATT AAAAA AACGCCCCG TAATATAACTCAGAC TERM 1350 961901 - 961931 + r 73 -2.5 -5.07652 | opp_overlap 961901 961908, overlap 961906 961908 TATAACTCAGACGAA TCATTAAGCCTAC ATTGC GTAGGCTATTTGA TTTTATTTTGCCCAG TERM 1351 961906 - 961926 + r 70 -5.4 -4.41486 | opp_overlap 961901 961908, overlap 961901 961908 CTCAGACGAATCATT AAGCCTAC ATTGC GTAGGCTA TTTGATTTTATTTTG TERM 1352 961908 - 961924 + r 71 -8 -3.76546 | opp_overlap 961901 961908, overlap 961906 961901 CAGACGAATCATTAA GCCTAC ATTGC GTAGGC TATTTGATTTTATTT ycaO 963694 - 961934 - | hypothetical protein TERM 1353 962060 - 962048 - G 70 -4.7 -4.4715 | opp_overlap 962049, overlap 962049 TTGCAAGCCATAAAA CGCCG CTT CGCCG CTCATTGCCGCACTG TERM 1354 962280 - 962290 + g 75 -6.8 -4.41047 | overlap 962275 TCGCCACCAGCCAGC GCCA GCA TGGC TTTTAATTCACCGAT ycaP 963824 - 964516 + | conserved hypothetical protein; putative inner membrane protein TERM 1355 965332 - 965311 - g 71 -3 -4.82901 | gap 1, opp_overlap 965328, overlap 965313 TGGCGCGCAGAAAAA TATC-GGCC CGGCT GGCCTGACA ATCGTCATCGTTCGT serC 964715 - 965803 + | 3-phosphoserine/phosphohydroxythreonine aminotransferase TERM 1356 965844 - 965822 - f 71 -9.1 -3.32294 | opp_overlap 965823, overlap 965823 CGAAATTTTGCATAA TCCCCACAG CCAGC CTGTGGGGT TTTTATTTCTGTTGT TERM 1357 965843 - 965823 - f 81 -12.6 -2.59055 | opp_overlap 965823, overlap 965822 GAAATTTTGCATAAT CCCCACAG CCAGC CTGTGGGG TTTTTATTTCTGTTG TERM 1358 965823 - 965843 + F 100 -12.6 -5.4659 | opp_overlap 965823 965822 GAAATTTTGCATAAT CCCCACAG CCAGC CTGTGGGG TTTTTATTTCTGTTG aroA 965874 - 967157 + | 5-enolpyruvylshikimate-3-phosphate synthetase TERM 1359 967202 - 967220 + F 100 -12.4 -5.75945 | opp_overlap 967200 967202 CTTTCTTTTCAAAGA CGTCGGCA CAT TGCCGGCG TTTTTTTTCGGACCT TERM 1360 967220 - 967202 - f 76 -10.2 -3.34398 | opp_overlap 967202, overlap 967200 CTTTCTTTTCAAAGA CGTCGGCA CAT TGCCGGCG TTTTTTTTCGGACCT ycaL 967327 - 968091 + | putative lipoprotein with metallohydrolase domain TERM 1361 968207 - 968227 + F 75 -8.9 -3.66784 | opp_overlap 968220, overlap 968220 AACGATTTGTGGCGT CGGCGCGTA TAA TGCGCGCGG TTATGTTAACGGTAC TERM 1362 968583 - 968620 + G 81 -10.5 -3.57561 | opp_overlap 968549, overlap 968560 AAGTCGCGGCATTCC CACGCGTTCGTGAAGCA TTAT TGCGTCGCCAACGCGCG TTTCGCGAATTACCA TERM 1363 968816 - 968804 - g 70 -6.9 -4.04806 | GCCGAGATCAAAGAA CGCGA CGA CCGCG ATCGTAACCGAGCGG TERM 1364 968924 - 968909 - g 70 -4 -4.68424 | gap 1, overlap 968918 968920 CAAGTGATTGAAAAA GCGC-TA CAA TACGCGC GCCAGAAATTGGCTC cmk 968264 - 968947 + | cytidylate kinase TERM 1365 969232 - 969222 - g 88 -8.2 -4.63527 | overlap 969223 969224 TGAGCAGTTCAAAAA CGCC CAG GGCG AGCTGGAAATCCAGG rpsA 969058 - 970731 + | 30S ribosomal subunit protein S1 TERM 1366 970742 - 970763 + F 84 -9.5 -4.29929 | overlap 970736 AGTAATTCTCTGACT CTTCGGGAT TTTT ATTCCGAAG TTTGTTGAGTTTACT TERM 1367 970840 - 970810 - f 90 -12.7 -3.33696 | gap 1, opp_overlap 970817, overlap 970813 970817 TCGTCCTGTAATCAA GCACTAAGGGCGGC TACG GCCGCCCTTAAT-C AATGCAGCAACAGCA TERM 1368 970838 - 970813 - f 93 -15.5 -2.84098 | opp_overlap 970817, overlap 970810 970817 TCCTGTAATCAAGCA CTAAGGGCGGC TACG GCCGCCCTTAA TCAATGCAGCAACAG TERM 1369 970817 - 970834 + F 95 -14.1 -3.18264 | opp_overlap 970813 970810 970817 GTAATCAAGCACTAA GGGCGGC TACG GCCGCCC TTAATCAATGCAGCA TERM 1370 970834 - 970817 - f 100 -14.1 -3.30554 | opp_overlap 970817, overlap 970813 970810 GTAATCAAGCACTAA GGGCGGC TACG GCCGCCC TTAATCAATGCAGCA ihfB 970891 - 971175 + | integration host factor (IHF), DNA-binding protein, beta subunit TERM 1371 971197 - 971227 + F 81 -9.8 -4.11404 | opp_overlap 971205, overlap 971198 971205 ACTCAAACTTGAACG CGAGAAAAGCACCT GTC GGGTGCTTTTTTCA TTTCTCTAATCTGGA TERM 1372 971198 - 971226 + F 86 -13.3 -3.0636 | opp_overlap 971205, overlap 971197 971205 CTCAAACTTGAACGC GAGAAAAGCACCT GTC GGGTGCTTTTTTC ATTTCTCTAATCTGG TERM 1373 971219 - 971205 - f 77 -7.1 -4.42788 | opp_overlap 971198 971197 971205 TTGAACGCGAGAAAA GCACC TGTCG GGTGC TTTTTTCATTTCTCT TERM 1374 971205 - 971219 + F 95 -7.8 -5.4387 | opp_overlap 971205, overlap 971198 971197 TTGAACGCGAGAAAA GCACCT GTC GGGTGC TTTTTTCATTTCTCT TERM 1375 972035 - 972022 - g 79 -3.9 -5.13137 | CAAAGAAATCAAAAA TATCA TGCG TGATA CTGGAACGGCGCATT ycaI 971381 - 973645 + | conserved hypothetical protein; putative inner membrane protein TERM 1376 974524 - 974537 + G 77 -6.7 -4.44211 | GGATAGCCTGACTGC CGGTA CGAT TACCG TTGTTTTCTCTTCAA msbA 973682 - 975430 + | fused lipid transporter subunits of ABC superfamily: membrane component ; ATP-binding component TERM 1377 975562 - 975538 - g 75 -5.5 -4.61873 | overlap 975543 TGCTATAAACTAAAA CTGAAGCGCGC CTG GCGTGCCCCCG TACCGGTTGTCGTGG TERM 1378 975833 - 975823 - g 70 -6.8 -4.09685 | TCTGACGCGGTAAAA GCCA TTC TGGC GCAACACCCTGATGT lpxK 975427 - 976413 + | lipid A 4'kinase TERM 1379 977348 - 977359 + G 74 -2.2 -5.10154 | gap 1, opp_overlap 977348 TCTGGGATCGCAAAC GC-GC GGA GCAGC TTTTTGATTTTAGCT ycaQ 976450 - 977682 + | hypothetical protein ycaR 977734 - 977916 + | hypothetical protein kdsB 977913 - 978659 + | 3-deoxy-manno-octulosonate cytidylyltransferase ycbJ 978813 - 979706 + | hypothetical protein ycbC 980462 - 979683 - | conserved hypothetical protein; putative inner membrane protein TERM 1380 981144 - 981129 - g 100 -2.4 -5.93252 | overlap 981131 CCGAAAAAGAAAAAA CGGACG CTTT CGCCAG ATTATCCACGCGACC smtA 980598 - 981383 + | putative AdoMet-dependent methyltransferase TERM 1381 982520 - 982491 - g 70 -5.7 -4.36914 | gap 1, opp_overlap 982518 TTGCCGTGTACAAAA CCAGA-CAAGTGCC GCT GGATCTTGGTCTGG TGGTACGCGAATATC TERM 1382 982548 - 982577 + G 78 -9.3 -3.99374 | gap 1, opp_overlap 982546, overlap 982518 982549 ATCTGTCACAGTATC CGCGTGC-ACGTCA CTT TGACGTTGCGCGCA TTGTTATTGATCAGG TERM 1383 982549 - 982576 + G 79 -12.8 -2.99142 | gap 1, opp_overlap 982546, overlap 982518 982548 TCTGTCACAGTATCC GCGTGC-ACGTCA CTT TGACGTTGCGCGC ATTGTTATTGATCAG mukF 981380 - 982702 + | Involved in chromosome partioning, Ca2+ binding protein TERM 1384 982754 - 982769 + G 70 -10.4 -3.17901 | overlap 982767 GAATCCGTTATTTCC GGCGCT GGAT AGCGCC TTACGTTCAGGCTGT mukE 982710 - 983387 + | protein involved in chromosome partitioning TERM 1385 984622 - 984576 - g 70 -6.5 -4.15565 | gap 1, opp_overlap 984568, overlap 984580 TGGACGAGCTGAAAA GCCAGCTTGCT-GACTACCAGC AGGC GCTGGACGTCCAGCAAACGCGC GCGATCCAGTATAAC TERM 1386 984774 - 984759 - g 81 -4.7 -5.10497 | AAGCGACCGAAAAAA TGCTC TCTCTT GAGCA GAAAATGAGCATGGC mukB 983387 - 987847 + | fused chromosome partitioning protein: putative nucleotide hydrolase ; conserved hypothetical protein ; conserved protein TERM 1387 987875 - 987850 - f 74 -7.5 -4.1899 | opp_overlap 987854, overlap 987854 TCAGGCGAGTTAAAA TTAAGGCGGCA GCAA TGCCGCCTTTT CTTTTTCCGAAAACT TERM 1388 987854 - 987871 + F 100 -12.7 -5.26119 | opp_overlap 987850 987854 GCGAGTTAAAATTAA GGCGGCA GCAA TGCCGCC TTTTCTTTTTCCGAA TERM 1389 987871 - 987854 - f 95 -12.7 -3.69605 | opp_overlap 987854, overlap 987850 GCGAGTTAAAATTAA GGCGGCA GCAA TGCCGCC TTTTCTTTTTCCGAA TERM 1390 989027 - 989015 - g 82 -7.7 -4.57482 | TGATGGACAAACAAA CTACG TCT CGTAG TAAACCTGCGCCTGC ycbB 988108 - 989955 + | putative exported enzyme ycbK 990136 - 990684 + | hypothetical protein ycbL 990711 - 991358 + | putative metal-binding hydrolase TERM 1391 991366 - 991397 + T 85 -8 -4.62471 | opp_overlap 991373, overlap 991373 TCTGGTAAAGGTGCA TAAAAAAGCCCGCT TTCA AGCGGGCTTCATTG TTTTTAACGCTTACA TERM 1392 991373 - 991390 + T 100 -12.7 -3.74868 | opp_overlap 991373, overlap 991366 AAGGTGCATAAAAAA GCCCGCT TTCA AGCGGGC TTCATTGTTTTTAAC TERM 1393 991390 - 991373 - T 100 -12.7 -5.25803 | opp_overlap 991373 991366 AAGGTGCATAAAAAA GCCCGCT TTCA AGCGGGC TTCATTGTTTTTAAC aspC 992598 - 991408 - | aspartate aminotransferase, PLP-dependent TERM 1394 992085 - 992107 + g 77 -12 -3.18912 | ACAGCACTACGTCGC CAGCCTGGGC TTC GTTCAGGCTG TTAATCAGTGCATCG TERM 1395 992736 - 992751 + r 93 -9 -5.07107 | opp_overlap 992736 AAGGCATAAAAAAAA CAGGAC CAAA GTCCTG TTTTTTCGGCATTTA TERM 1396 992751 - 992736 - R 100 -9 -5.97575 | opp_overlap 992736 AAGGCATAAAAAAAA CAGGAC CAAA GTCCTG TTTTTTCGGCATTTA ompF 993871 - 992783 - | outer membrane porin 1a (Ia;b;F) TERM 1397 993303 - 993323 + g 70 -4.7 -4.57569 | gap 1, overlap 993305 CCGTCGCCGTTAGAG CG-GCGTG CAGTGT CACGCTCG TTTTTACCCAGGTAC TERM 1398 994322 - 994296 - R 83 -3 -5.4833 | opp_overlap 994297, overlap 994297 994300 TCAGCTAAGAAAAAA CTAATCCGCAAT AAG AATGCAGATTAT TTTTTGTGCGTAAAT TERM 1399 994297 - 994321 + r 80 -4.3 -5.28176 | opp_overlap 994297 994296 994300 CAGCTAAGAAAAAAC TAATCCGCAAT AAG AATGCAGATTA TTTTTTGTGCGTAAA TERM 1400 994458 - 994439 - R 100 -13.6 -5.75599 | opp_overlap 994441 GAAAGGATAAAAAAA GAGCCAGC GGGC GCTGGCTC TTGAAGACGCTAAAT TERM 1401 994441 - 994456 + r 73 -10.4 -3.02144 | opp_overlap 994439 AAGGATAAAAAAAGA GCCAGC GGGC GCTGGC TCTTGAAGACGCTAA asnS 995873 - 994473 - | asparaginyl tRNA synthetase TERM 1402 996033 - 996016 - R 100 -9.1 -5.58209 | opp_overlap 996013 TTAAAGGTAAAAAAA GGGAGCC GATT AGCTCCC TGATGATATTAACTG pncB 997244 - 996042 - | nicotinate phosphoribosyltransferase TERM 1403 999551 - 999541 - g 72 -6.8 -4.19472 | GAAGATATTGCAAAA CGCA CTC TGCG TAATGCCTGCCTGCG TERM 1404 1000052 - 1000040 - g 70 -4.7 -4.47328 | overlap 1000041 AACGTCAGGAGAAAA TGCGC GCG GCGCT GGAACAGTTGAAAGG pepN 997510 - 1000122 + | aminopeptidase N TERM 1405 1000202 - 1000258 + T 100 -15.2 -3.21924 | gap 1, opp_overlap 1000202 1000203, overlap 1000202 1000203 TTGTAGGCTGGATAA GGCGTTCA-CGCCGCATCAGGCAGTCG TGCC CAACTGCCTGATGCGACGCTTGACGCG TCTTATCAGGCCTAC TERM 1406 1000202 - 1000260 + T 83 -11.2 -3.30124 | gap 3, opp_overlap 1000202 1000203, overlap 1000202 1000203 TTGTAGGCTGGATAA GGCGT-TCACGC--CGCATCAGGCAGTCG TGCC CAACTGCCTGATGCGACGCTTGACGCGTC TTATCAGGCCTACAA TERM 1407 1000258 - 1000202 - T 100 -17.4 -3.30124 | gap 1, opp_overlap 1000202 1000202 1000203, overlap 1000203 TTGTAGGCTGGATAA GGCGTTCA-CGCCGCATCAGGCAGTCG TGCC CAACTGCCTGATGCGACGCTTGACGCG TCTTATCAGGCCTAC TERM 1408 1000257 - 1000203 - T 100 -20.9 -2.57931 | gap 1, opp_overlap 1000203 1000202 1000202, overlap 1000202 TGTAGGCTGGATAAG GCGTTCA-CGCCGCATCAGGCAGTCG TGCC CAACTGCCTGATGCGACGCTTGACGC GTCTTATCAGGCCTA TERM 1409 1000203 - 1000257 + T 100 -18.7 -2.5294 | gap 1, opp_overlap 1000202 1000203, overlap 1000202 1000202 TGTAGGCTGGATAAG GCGTTCA-CGCCGCATCAGGCAGTCG TGCC CAACTGCCTGATGCGACGCTTGACGC GTCTTATCAGGCCTA ssuB 1001084 - 1000317 - | alkanesulfonate transporter subunit ; ATP-binding component of ABC superfamily ssuC 1001872 - 1001081 - | alkanesulfonate transporter subunit ; membrane component of ABC superfamily ssuD 1003029 - 1001884 - | alkanesulfonate monooxygenase, FMNH(2)-dependent ssuA 1003985 - 1003026 - | alkanesulfonate transporter subunit ; periplasmic-binding component of ABC superfamily TERM 1410 1003070 - 1003082 + g 74 -3.3 -5.00616 | GCTGCCAGATGCGCT GGCGA ATA TCGAC TTTTTTCGGCACCAG ssuE 1004553 - 1003978 - | NAD(P)H-dependent FMN reductase TERM 1411 1005401 - 1005390 - g 74 -3 -4.91852 | GCGATTAAAAATAAA CAAA ATGA TTTG CAAGTGATGCACCAT TERM 1412 1005632 - 1005613 - g 70 -4.2 -4.65895 | overlap 1005617 CGCTTCAGTTAAAAA GCACCGAA ATTA TTCGCCGC TTGTCACAGGAATTA pyrD 1004790 - 1005800 + | dihydro-orotate oxidase, FMN-linked TERM 1413 1005822 - 1005865 + F 78 -10.6 -3.22448 | opp_overlap 1005832 1005833 1005835, overlap 1005829 1005833 CTTCAAATTCCTCTT TATAAGATAATCAGGGCT TTATTTTC AGCCCTGGTTGTTTTATA TTCATCGCTGTTGCT TERM 1414 1005829 - 1005858 + F 78 -6.5 -4.70583 | opp_overlap 1005832 1005833 1005835, overlap 1005822 1005833 TTCCTCTTTATAAGA TAATCAGGGCT TTATTTTC AGCCCTGGTTG TTTTATATTCATCGC ycbW 1005974 - 1006516 + | hypothetical protein ycbX 1007622 - 1006513 - | putative 2Fe-2S cluster-containing protein TERM 1415 1006695 - 1006711 + g 74 -8.7 -3.90922 | GATTTTCTAATTGCT CCAGCAG CAC CTGTTGG TTATTTCCACGAAAT TERM 1416 1007103 - 1007120 + g 75 -5.5 -4.62069 | opp_overlap 1007094 1007095 CGGAAACCACCAGAT TGGGGCG GAAT TGCTCCA TTTTTACACTGGCCG ycbY 1007720 - 1009828 + | putative conserved AdoMet-dependent methyltransferase with RNA interaction domain uup 1009840 - 1011747 + | fused ATP-binding subunits of ABC superfamily protein involved in precise excision of transposons TERM 1417 1011821 - 1011793 - f 82 -8.9 -4.21936 | overlap 1011794 CTGACAACGGTAAAA TTGCCTGATGAAC TGG GTTTATCAGGCAT GAAAACCAACACTTT TERM 1418 1011820 - 1011794 - f 83 -12.4 -3.1268 | overlap 1011793 TGACAACGGTAAAAT TGCCTGATGAAC TGG GTTTATCAGGCA TGAAAACCAACACTT TERM 1419 1012275 - 1012291 + G 72 -4.3 -4.62069 | opp_overlap 1012275 GGTCCGTTTAAAAGA GCAACTG GCA CGGGTGC TTTTTCAACTCAAAA TERM 1420 1012377 - 1012409 + G 71 -3.3 -4.84146 | overlap 1012382 GATGGCTTACGGCAG CATTGGGGTAGGCAG CAG CTTTCTCCCCTGGTG TTTATTTTGTGTCCT pqiA 1011877 - 1013130 + | paraquat-inducible membrane protein A TERM 1421 1013925 - 1013939 + G 70 -4.3 -4.58424 | GGCAGCCAGTGGCAC CGAAA ACAGC TTTCG TTTTGTATGATGATC pqiB 1013135 - 1014775 + | paraquat-inducible protein B ymbA 1014787 - 1015335 + | hypothetical protein TERM 1422 1015358 - 1015384 + F 100 -10.8 -6.02919 | opp_overlap 1015358 GATTTGTAAATATAA CCGTCTCCGGTA TGT TGCCTGAGGCGG TTTTTTTGTTTCTAA TERM 1423 1015524 - 1015550 + F 73 -3 -5.07652 | overlap 1015526 CGCGGTATTGCTTAA CTGTGATTGC ATATTTA GTAATCACTG TTTTCTTTTCCACCA rmf 1015591 - 1015758 + | ribosome modulation factor TERM 1424 1015773 - 1015803 + T 74 -8.2 -4.12475 | opp_overlap 1015776 1015780, overlap 1015780 ATTCTGTCTCTTTAA AAAGAAACCTCCGC ATT GCGGAGGTTTCGCC TTTATATACTCTGTC TERM 1425 1015800 - 1015776 - T 100 -18.7 -4.56597 | opp_overlap 1015773 1015780, overlap 1015780 CTGTCTCTTTAAAAA GAAACCTCCGC ATT GCGGAGGTTTC GCCTTTATATACTCT TERM 1426 1015796 - 1015780 - T 100 -13.7 -4.85782 | opp_overlap 1015780 1015773, overlap 1015776 CTCTTTAAAAAGAAA CCTCCGC ATT GCGGAGG TTTCGCCTTTATATA TERM 1427 1015780 - 1015796 + T 100 -13.7 -3.75418 | opp_overlap 1015776 1015780, overlap 1015773 CTCTTTAAAAAGAAA CCTCCGC ATT GCGGAGG TTTCGCCTTTATATA fabA 1016346 - 1015828 - | beta-hydroxydecanoyl thioester dehydrase ycbZ 1018175 - 1016415 - | putative ATP-dependent protease ycbG 1018361 - 1018813 + | hypothetical protein TERM 1428 1018870 - 1018855 - T 100 -11.8 -6.10489 | opp_overlap 1018855 AAGGCGAAAAAAAAA CCCCGC AGCT GCGGGG TTTTTCTACCAGACG TERM 1429 1018855 - 1018870 + T 100 -11.8 -4.82901 | opp_overlap 1018855 AAGGCGAAAAAAAAA CCCCGC AGCT GCGGGG TTTTTCTACCAGACG ompA 1019931 - 1018891 - | outer membrane protein A (3a;II*;G;d) ECS88_0979 1020085 - 1020303 + | hypothetical protein sulA 1020796 - 1020287 - | SOS cell division inhibitor yccR 1021015 - 1021644 + | hypothetical protein yccS 1023760 - 1021607 - | conserved hypothetical protein; putative inner membrane protein TERM 1430 1022362 - 1022336 - G 77 -2.9 -5.16572 | gap 1, overlap 1022338 1022341 1022356 ACGGAAGGCAAAAAA GAGCACGCCGGT AATA ACCAGCA-GCAC CAACTGCCCTTCCAG TERM 1431 1022504 - 1022493 - G 72 -4.4 -4.62441 | TGGCAGACAAACAAA CTTG TCAG CAAG ATCCAATACCCGTGA TERM 1432 1022914 - 1022889 - G 72 -8.3 -3.745 | gap 1, overlap 1022891 TGACGCAGCAAAATA CA-GCGTGACAG TTG CTGGCACGCCTG GCCCTGCATCGACAT TERM 1433 1022911 - 1022891 - G 78 -11.1 -3.45073 | overlap 1022889 ACGCAGCAAAATACA GCGTGACAG TTG CTGGCACGC CTGGCCCTGCATCGA yccF 1024225 - 1023779 - | conserved hypothetical protein; putative inner membrane protein TERM 1434 1023811 - 1023823 + g 71 -9.1 -3.52906 | overlap 1023814 GTGCATTGGCTTCGC GCGCA GCT TGCGC TGTTTCTACCGATAC TERM 1435 1024146 - 1024132 - G 75 -5 -4.74103 | GTGGTAAGGTAAAAA TCAGCA CAA TACTGA CCAGAGTCGCCAACA helD 1024348 - 1026402 + | DNA helicase IV TERM 1436 1026426 - 1026407 - T 100 -13.6 -4.24711 | opp_overlap 1026403 1026400 GAAAACCGTAAGAAA CAGGTGGC GTTT GCCACCTG TGCAATATTACTTCA mgsA 1026892 - 1026434 - | methylglyoxal synthase TERM 1437 1026978 - 1026965 - R 86 -8.1 -4.7889 | overlap 1026967 ATAAAGACTGAAAAA GCCTG CGCA CAGGC ACAAAAATCTCAGGA yccT 1027650 - 1026988 - | hypothetical protein TERM 1438 1028001 - 1027983 - g 77 -8.8 -4.08064 | overlap 1027985 AAGTTGCCGGCAAAA CACTGCTG GGC CAGCAGGG GTATGGCACGCTGGC TERM 1439 1027999 - 1027985 - g 77 -10 -3.63744 | overlap 1027983 GTTGCCGGCAAAACA CTGCTG GGC CAGCAG GGGTATGGCACGCTG yccU 1027823 - 1028236 + | putative CoA-binding protein TERM 1440 1028268 - 1028241 - T 100 -17.8 -5.63517 | opp_overlap 1028241 TGGCCAAATAAAAAA TCCCCGGAAGGC AAAA ACCTTCCGGGGA TTTGTTCAGGGATTA TERM 1441 1028241 - 1028268 + T 100 -17.1 -4.1673 | opp_overlap 1028241 TGGCCAAATAAAAAA TCCCCGGAAGG CAAAAA CCTTCCGGGGA TTTGTTCAGGGATTA yccV 1028598 - 1028281 - | DNA-binding protein, hemimethylated yccW 1029759 - 1028656 - | putative AdoMet-dependent methyltransferase, UPF0064 family TERM 1442 1028771 - 1028792 + gH 72 -5.9 -4.40358 | gap 1, opp_overlap 1028775, overlap 1028775 ACATCACGACCGGCA TCAATTGCGG CAT CCGCGAT-GA TTTTCTGAAATAAAT TERM 1443 1029323 - 1029351 + gH 70 -3.8 -4.64763 | overlap 1029325 GGCGGCAACTCGCCG GTGATGGGGC CCTGAGTCA GCTCCATCCC TTCTTTTTTACGTAC yccX 1029712 - 1030218 + | acylphosphatase TERM 1444 1030238 - 1030263 + Tr 75 -9.7 -3.54935 | ATTTTACCGGTTTAG GCAGGCCAGCA ATTT TGGTGGCTTGC TTTGCCGGACCTTTC tusE 1030544 - 1030215 - | subunit of enzyme for 2-thio modification of mnm5s2U of tRNA anticodon U TERM 1445 1030279 - 1030310 + g 91 -8 -5.06414 | opp_overlap 1030284 TTTGCCGGACCTTTC GGAAACAGTCGGTA TAAA TAGCGGCTGTTACC TTTTTCTTCGCCAAA TERM 1446 1030459 - 1030486 + g 75 -6.9 -4.44046 | opp_overlap 1030457, overlap 1030457 1030460 1030462 1030481 TTCTCTGCAATCACC ACCGCCAGTGG TTCACT CCACTGGCTGC TTTCTTTGAGATAGC TERM 1447 1030460 - 1030485 + g 70 -10.4 -3.25946 | opp_overlap 1030457, overlap 1030457 1030459 1030462 1030481 TCTCTGCAATCACCA CCGCCAGTGG TTCACT CCACTGGCTG CTTTCTTTGAGATAG TERM 1448 1030462 - 1030483 + g 77 -11.6 -3.18854 | opp_overlap 1030457, overlap 1030457 1030460 1030459 1030481 TCTGCAATCACCACC GCCAGTGG TTCACT CCACTGGC TGCTTTCTTTGAGAT TERM 1449 1030616 - 1030590 - R 95 -7.9 -5.46657 | overlap 1030594 CAGTGTAACAAAAAA CAAAGCCCCGC ATAAA GCGAGGCTCGG TAAGTAACCCTGGGC TERM 1450 1030612 - 1030594 - R 100 -9.5 -5.20735 | overlap 1030590 GTAACAAAAAACAAA GCCCCGC ATAAA GCGAGGC TCGGTAAGTAACCCT yccA 1031295 - 1030636 - | conserved hypothetical protein; putative inner membrane protein TERM 1451 1031077 - 1031090 + g 70 -5.2 -4.42386 | GGAGATAATCCCGGT CGGC TTATTC GCCG TTTTGTAGGTCAGGA TERM 1452 1031464 - 1031496 + H 79 -9.2 -3.90744 | opp_overlap 1031469, overlap 1031469 TTCGACAGGCAAAAG AAAAAGGGGTTAGC ATTTA GCTAACCCCTTATC TTATTTGGCGGAAGC TERM 1453 1031491 - 1031469 - H 100 -13.5 -5.48213 | opp_overlap 1031464 1031469 CAGGCAAAAGAAAAA GGGGTTAGC ATTTA GCTAACCCC TTATCTTATTTGGCG TERM 1454 1031469 - 1031491 + H 100 -13.5 -3.90464 | opp_overlap 1031469, overlap 1031464 CAGGCAAAAGAAAAA GGGGTTAGC ATTTA GCTAACCCC TTATCTTATTTGGCG TERM 1455 1032986 - 1032998 + G 71 -9.1 -3.54459 | overlap 1032992 1032994 GTACCCATTCCACCG CCGAC ACC GTCGG TTTAACCGCGCTTGG hyaA 1032016 - 1033134 + | hydrogenase 1, small subunit TERM 1456 1034342 - 1034328 - g 88 -11.4 -3.72893 | TACTCGTGGATCAAA GCGCCA CGC TGGCGC GGTAACGCGATGGAA TERM 1457 1034580 - 1034567 - g 72 -4.5 -4.67904 | overlap 1034568 GACCAACCTGAAAAA CGGCA ATCT TGCCA CCGCTTCCACGGAAA hyaB 1033131 - 1034924 + | hydrogenase 1, large subunit hyaC 1034943 - 1035650 + | hydrogenase 1, b-type cytochrome subunit hyaD 1035647 - 1036234 + | protein involved in processing of HyaA and HyaB proteins hyaE 1036231 - 1036629 + | protein involved in processing of HyaA and HyaB proteins hyaF 1036626 - 1037483 + | protein involved in nickel incorporation into hydrogenase-1 proteins TERM 1458 1038054 - 1038089 + G 70 -5.4 -4.34402 | gap 1, opp_overlap 1038054 GTTGTGGATATTGAA TGC-CAACGGTTGGATG CAA TACCCGACCGGTGCGCA TTTTGATATCGACAC TERM 1459 1038533 - 1038523 - g 77 -8.2 -4.0942 | CACTCATTAGATAAA CCCG TGC CGGG TCTGAAGAATTTGAT appC 1037617 - 1039161 + | cytochrome bd-II oxidase, subunit I appB 1039173 - 1040309 + | cytochrome bd-II oxidase, subunit II TERM 1460 1040455 - 1040424 - f 95 -14.4 -3.24166 | overlap 1040419 AGTTAACGAAGGTAA GCCTGATGAGGCGC ATTA GCGTCGCATCAGGC AATCAATAATGTCGG TERM 1461 1040862 - 1040848 - g 77 -10 -3.65542 | overlap 1040837 1040846 CGTACCCGTAAAACA GGCGAA GCC TTCGCC GCCGGGCTGGCACCT TERM 1462 1040961 - 1040948 - g 72 -4.5 -4.59853 | overlap 1040949 TTAATCCTCTAAAAA CTGGC GTTT GCCAA CTGGATAACGCGAAT appA 1040494 - 1041804 + | phosphoanhydride phosphorylase cspH 1042004 - 1041792 - | stress protein, member of the CspA-family ECS88_1004 1041906 - 1042049 + | hypothetical protein cspG 1042290 - 1042502 + | DNA-binding transcriptional regulator TERM 1463 1042723 - 1042707 - f 70 -9.4 -2.95962 | opp_overlap 1042707, overlap 1042704 CACAAAATAATATCA GGCTCC CTCGT GGAGCC TTTTTTATATCTGCC TERM 1464 1042707 - 1042723 + F 100 -9.4 -5.4251 | opp_overlap 1042707 1042704 CACAAAATAATATCA GGCTCC CTCGT GGAGCC TTTTTTATATCTGCC gnsA 1042896 - 1043069 + | putative regulator of phosphatidylethanolamine synthesis TERM 1465 1043074 - 1043106 + T 71 -7.8 -3.79909 | gap 1, opp_overlap 1043066 1043081, overlap 1043073 AAATAATGTGATTTT GT-GAACATCACCCC GTGC GAGGTGATGTTCCGC TTGTTGCTAATTTAG yccM 1044191 - 1043118 - | putative 4Fe-4S membrane protein TERM 1466 1044154 - 1044175 + g 100 -2.9 -5.71712 | gap 1, overlap 1044158 1044159 CCGCCCGTCGTGCCT GGCCGCCGCT GCC AGCGG-GTTC TTTTTTTCTCTGCCA TERM 1467 1044158 - 1044172 + g 80 -5.6 -4.92669 | overlap 1044154 1044159 CCGTCGTGCCTGGCC GCCGCT GCC AGCGGG TTCTTTTTTTCTCTG TERM 1468 1044159 - 1044171 + g 71 -9.1 -3.53161 | overlap 1044158 1044154 CGTCGTGCCTGGCCG CCGCT GCC AGCGG GTTCTTTTTTTCTCT torS 1047006 - 1044274 - | hybrid sensory histidine kinase in two-component regulatory system with TorR TERM 1469 1045904 - 1045916 + g 70 -5.5 -4.30719 | overlap 1045897 1045905 CCATCCAGCAAGCGT TGCAG CGC CTGCG TTTGTTCTGCAAGAG TERM 1470 1047214 - 1047236 + G 72 -7.6 -3.91072 | opp_overlap 1047215, overlap 1047215 GCCGCTAAAAGCCAA ACGCGCATGG AAA CTGTGCGCGC TTTATCCCAGTTTGA TERM 1471 1047215 - 1047235 + G 71 -11.1 -2.94161 | opp_overlap 1047215, overlap 1047214 CCGCTAAAAGCCAAA CGCGCATGG AAA CTGTGCGCG CTTTATCCCAGTTTG TERM 1472 1047243 - 1047265 + G 71 -9.2 -3.52093 | TGTGCGCGCTTTATC CCAGTTTGAA AGA TTCATACTGG TTATCGTTGAACTAT TERM 1473 1047750 - 1047720 - g 72 -8.2 -3.7456 | overlap 1047744 ATAACGATATTGAAA TCCAGCGTAACCTG CTG CAGGAGATGCTGGA ACGCCATCCAGAAAT TERM 1474 1047977 - 1048004 + G 70 -5.6 -4.30576 | gap 1 CAATTACAGGGGCAA TCGGT-GTCTGAT AAT GTCAGCCCACCGA TTTTAGTCATGACGC torT 1047089 - 1048117 + | periplasmic sensory protein associated with the TorRS two-component regulatory system torR 1048782 - 1048090 - | DNA-binding response regulator in two-component regulatory system with TorS torC 1048912 - 1050084 + | trimethylamine N-oxide (TMAO) reductase I, cytochrome c-type subunit TERM 1475 1050446 - 1050457 + G 72 -5.8 -4.38712 | CGACACCTCCCAACG CGGT GATA ACCG TTTTGTGCGCGTGAG TERM 1476 1050859 - 1050849 - g 72 -6.8 -4.21908 | overlap 1050856 TACGAGCAGCTAAAA GCGA AAG TCGC CGCCGGTGAAATTGA torA 1050084 - 1052630 + | trimethylamine N-oxide (TMAO) reductase I, catalytic subunit torD 1052627 - 1053226 + | chaperone involved in maturation of TorA subunit of trimethylamine N-oxide reductase system I TERM 1477 1053480 - 1053532 + T 71 -4 -4.84359 | gap 1, opp_overlap 1053453 1053505, overlap 1053453 1053497 GCATCAGGCATTATG GCGCAGTTGCCGGATGCGGCGAGAA CGCC TTATC-CGGCCTACGGGAACAGCGC TTTTTGTGGGCCTGA TERM 1478 1053603 - 1053633 + T 86 -14 -2.73364 | opp_overlap 1053601 1053600 1053608, overlap 1053609 GTGAGCCACAAACCG GGAAAGCCGCTGGC GCA GCAGGCGGTTTTCC TGCTTCAGGTGCGCA cbpM 1053887 - 1053582 - | modulator of CbpA co-chaperone TERM 1479 1053609 - 1053627 + g 78 -8 -4.3534 | opp_overlap 1053608 1053601 1053600, overlap 1053603 CACAAACCGGGAAAG CCGCTGGC GCA GCAGGCGG TTTTCCTGCTTCAGG cbpA 1054807 - 1053887 - | curved DNA-binding protein, DnaJ homologue that functions as a co-chaperone of DnaK TERM 1480 1054007 - 1054021 + g 86 -6.4 -5.14563 | overlap 1054016 TTTCAGTACCGCATA CAGATC GCC GGTCTG TTTTTTGCTCACCAG TERM 1481 1054527 - 1054507 - G 72 -6.9 -4.18494 | overlap 1054522 CATGCTGACCGAAAA TTGACGAGA AGA TATCGTCAA AATCTTCGGCGTTAA TERM 1482 1055193 - 1055221 + H 77 -6.9 -4.56775 | gap 1, opp_overlap 1055195 GAGGCCGGGGCTAAT CAGGCATAGTTT GCGTCA AAACT-TGCCTG TTTTTAAAGGGGAAT agp 1055342 - 1056583 + | glucose-1-phosphatase/inositol phosphatase TERM 1483 1056613 - 1056591 - T 100 -16.3 -4.84673 | opp_overlap 1056587 TGAAATAACAGAAAA CTCCCCCGC GTGAA GCGGGGGAG TCGCTGGTTAAACGT yccJ 1056848 - 1056621 - | hypothetical protein wrbA 1057465 - 1056869 - | putative conserved flavoprotein TERM 1484 1057735 - 1057720 - gH 93 -11.8 -3.82665 | opp_overlap 1057716 1057720 CAGGATATTACCAAA CGCGGG TCTG CCCGCG TCAGTTCACTAAGCT TERM 1485 1057720 - 1057735 + GH 79 -11.8 -2.55015 | opp_overlap 1057720, overlap 1057716 CAGGATATTACCAAA CGCGGG TCTG CCCGCG TCAGTTCACTAAGCT TERM 1486 1057785 - 1057770 - gH 76 -7.6 -4.19817 | opp_overlap 1057777 CCCACGTAGCGAAAA TATGGC AGCC GCCATA CGCCGCGTTAATTCT ECS88_1019 1057669 - 1057905 + | hypothetical protein ECS88_1020 1057869 - 1058027 + | hypothetical protein TERM 1487 1058067 - 1058085 + T 100 -13.1 -4.84918 | opp_overlap 1058064 GTCAAAAAGCCATCA CCGCCGG TTACC CCGGCGG TTTTCTGTTTATGGC rutF 1059831 - 1059337 - | flavin:NADH oxidoreductase subunit of alternative pyrimidine degradation pathway rutE 1060432 - 1059842 - | oxidoreductase subunit of the alternative pyrimidine degradation pathway TERM 1488 1060002 - 1059989 - G 73 -9.5 -3.57792 | GTATTGACGGTCAAA GCCCG ACAT CGGGC CGGTATCCAGCCCCA rutD 1061242 - 1060442 - | enzyme of the alternative pyrimidine degradation pathway rutC 1061636 - 1061250 - | enzyme of the alternative pyrimidine degradation pathway rutB 1062340 - 1061648 - | enzyme of the alternative pyrimidine degradation pathway TERM 1489 1061837 - 1061819 - G 79 -2.2 -5.26918 | opp_overlap 1061820 1061821 1061821, overlap 1061820 1061821 ATACTCCAGAAAAAA GCCGTCGC GTA GCGTCGAT TCTACGCAGACGTTG rutA 1063488 - 1062340 - | monooxygenase of the alternative pyrimidine degradation pathway TERM 1490 1063794 - 1063781 - g 82 -2.3 -5.45652 | overlap 1063767 AGCGCGAAGAAAAAA GCGAT TCTT AGCGC AGCACTGGACACTTT rutR 1063718 - 1064356 + | DNA-binding transcriptional regulator of the alternative pyrimidine degradation pathway TERM 1491 1064358 - 1064392 + T 71 -9.3 -3.35775 | gap 1, opp_overlap 1064358 1064360 1064361, overlap 1064358 1064356 TTCGACCACGTTAAA GAT-GCCGGAGGAGGT TGTA ACATCCTCCGGCTACC TGTTTAACCGATCGT TERM 1492 1064358 - 1064391 + T 74 -10.9 -2.61144 | opp_overlap 1064358 1064360 1064361, overlap 1064356 1064358 TTCGACCACGTTAAA GATGCCGGAGGAGGT TGTA ACATCCTCCGGCTAC CTGTTTAACCGATCG TERM 1493 1064392 - 1064358 - T 87 -11.5 -3.62096 | gap 1, opp_overlap 1064358 1064356 1064358, overlap 1064360 1064361 TTCGACCACGTTAAA GAT-GCCGGAGGAGGT TGTA ACATCCTCCGGCTACC TGTTTAACCGATCGT TERM 1494 1064389 - 1064360 - T 85 -12.1 -3.39018 | opp_overlap 1064358 1064358 1064356, overlap 1064358 1064361 CGACCACGTTAAAGA TGCCGGAGGAGGT TGTA ACATCCTCCGGCT ACCTGTTTAACCGAT TERM 1495 1064388 - 1064361 - T 93 -15.6 -2.63089 | opp_overlap 1064358 1064358 1064356, overlap 1064360 1064358 GACCACGTTAAAGAT GCCGGAGGAGGT TGTA ACATCCTCCGGC TACCTGTTTAACCGA TERM 1496 1064430 - 1064415 - T 80 -10.4 -3.73775 | opp_overlap 1064424 CCGATCGTCATTAAA CTGGCG TTAC CGCCAG CAGCAGCGGTATTCA putA 1068358 - 1064396 - | fused DNA-binding transcriptional regulator ; proline dehydrogenase ; pyrroline-5-carboxylate dehydrogenase TERM 1497 1066412 - 1066426 + g 75 -5.7 -4.62336 | opp_overlap 1066421 CGATTGTTCCAGCAT TGGCA AGGAC TGCCA TTTTTGCAGTGCACT TERM 1498 1067926 - 1067939 + g 93 -2.3 -5.63103 | opp_overlap 1067922 CCTGAACCATACCTG CGCGA CCAC TGGCG TTTTTTTGATTACGC TERM 1499 1068052 - 1068036 - G 70 -10.9 -2.82516 | overlap 1068040 TGTTCCAGCAGCATA GAAACCG CTT CGGTTTC CGGGCGGCGATAGGC putP 1068781 - 1070289 + | proline:sodium symporter TERM 1500 1070363 - 1070333 - f 87 -14.1 -2.76453 | opp_overlap 1070333 1070334, overlap 1070324 TCATAACCGGAAGCA GGCAGAGGGCAAT CAGTT ATTGCCCTCTGCG TTTTTTCTCAAAATA TERM 1501 1070333 - 1070363 + F 100 -14.1 -5.252 | opp_overlap 1070324 1070333, overlap 1070334 TCATAACCGGAAGCA GGCAGAGGGCAAT CAGTT ATTGCCCTCTGCG TTTTTTCTCAAAATA TERM 1502 1070334 - 1070362 + F 100 -17.6 -3.74397 | opp_overlap 1070333, overlap 1070333 CATAACCGGAAGCAG GCAGAGGGCAAT CAGTT ATTGCCCTCTGC GTTTTTTCTCAAAAT efeU 1070500 - 1071339 + | ferrous iron permease efeO 1071397 - 1072524 + | ferrous iron transport binding protein TERM 1503 1072573 - 1072550 - g 90 -9.6 -4.44797 | opp_overlap 1072548 1072564, overlap 1072564 GTATGAAGATGAAAA CGGCGTGA ATGAACCG TCACGCCG ACGTTTACTGAAAGG TERM 1504 1072652 - 1072642 - g 95 -6.8 -5.28176 | CTCATGCACAAAAAA CGCA AAG TGCG CCGGGTACGCTTTCA efeB 1072530 - 1073801 + | heme-binding periplasmic protein involved in iron transport; Tat-dependent exported TERM 1505 1073898 - 1073935 + F 72 -7.5 -4.12188 | opp_overlap 1073911 AATCGGTGCGGGTCG GTAGGCCGGATAAGGCG TTCA CGCCGCATCCGGCAAGC TTTTACCAGTACTGC TERM 1506 1074376 - 1074393 + G 70 -10.5 -2.80816 | opp_overlap 1074375 1074376 GTTCGTGCGCATAAT CGCGCTG CCAA CGGCGCG TGTGATGAATACAAA TERM 1507 1075200 - 1075167 - g 82 -13.3 -2.84504 | gap 1, overlap 1075164 1075162 ATTCGGTAAAGAGGA TTGCGTACGTTCGGCA CTT TGCC-AACGTACGCTA CATGCATACAGTTAA phoH 1074292 - 1075215 + | putative phosphate starvation-inducible protein with ATPase activity TERM 1508 1075230 - 1075254 + T 100 -13.6 -4.323 | overlap 1075234 AGTGTATTATCGGCG CAGAGCCCGG GCGAA CCGGGCTTTG TTTTGGGTGTTTACG TERM 1509 1075234 - 1075250 + T 95 -10.8 -4.71418 | overlap 1075230 TATTATCGGCGCAGA GCCCGG GCGAA CCGGGC TTTGTTTTGGGTGTT pgaD 1075678 - 1075265 - | putative inner membrane protein associated with biofilm formation pgaC 1077005 - 1075680 - | putative glycosyl transferase associated with biofilm formation pgaB 1079016 - 1076998 - | putative polysaccharide deacetylase associated with biofilm formation; putative lipoprotein TERM 1510 1080434 - 1080455 + H 90 -4.3 -5.48825 | opp_overlap 1080434, overlap 1080439 CCTTGTGATAAAAGA GCTCTGTCA TTAT TGACTGTGC TTTTTTTGGCTGCTG TERM 1511 1081935 - 1081903 - H 72 -7.9 -3.918 | opp_overlap 1081912, overlap 1081904 ATATAAAGCATTAAA GTGATAATAATTGCA TTC TGCAACTATCATCAT CGGTATTGTTTGTGG TERM 1512 1081934 - 1081904 - H 78 -11.4 -2.93995 | opp_overlap 1081912, overlap 1081903 TATAAAGCATTAAAG TGATAATAATTGCA TTC TGCAACTATCATCA TCGGTATTGTTTGTG ycdT 1082036 - 1083403 + | putative diguanylate cyclase TERM 1513 1083473 - 1083496 + F 81 -9.6 -3.98913 | opp_overlap 1083475, overlap 1083475 CAATATACGAAAAAA AAGCTCGTAC TTTC GTACGAGCTC TTCTTTAAATATGGC TERM 1514 1083494 - 1083475 - f 100 -12.2 -5.92337 | opp_overlap 1083475 1083473 ATATACGAAAAAAAA GCTCGTAC TTTC GTACGAGC TCTTCTTTAAATATG TERM 1515 1083475 - 1083494 + F 89 -12.2 -3.58256 | opp_overlap 1083475, overlap 1083473 ATATACGAAAAAAAA GCTCGTAC TTTC GTACGAGC TCTTCTTTAAATATG TERM 1516 1083719 - 1083729 + F 81 -3.2 -5.40072 | overlap 1083680 ATGCAGTTTTAATAA GCGA AAT TTGC TTTTTTTGCCACCGA ycdW 1083829 - 1084767 + | 2-ketoacid reductase ycdX 1084822 - 1085559 + | putative PHP hydrolase ycdY 1085583 - 1086137 + | hypothetical protein TERM 1517 1086676 - 1086658 - g 71 -2.2 -4.88407 | overlap 1086660 TTACGCAATGAAAAA CAGCGGCC TGT GGCTGGCG GCGCGTAGTACGAAG ycdZ 1086239 - 1086730 + | conserved hypothetical protein; putative inner membrane protein TERM 1518 1086747 - 1086721 - T 93 -9.5 -5.01811 | opp_overlap 1086725, overlap 1086725 GCAGCAAATCAAAAA TAAAGCGTGAG GGGCA CTCACGCTTTC GCTTAAACAGTAAAA TERM 1519 1086725 - 1086743 + T 80 -10.3 -3.75332 | opp_overlap 1086725 1086721 CAAATCAAAAATAAA GCGTGAG GGGCA CTCACGC TTTCGCTTAAACAGT TERM 1520 1086743 - 1086725 - T 93 -10.3 -5.00388 | opp_overlap 1086725, overlap 1086721 CAAATCAAAAATAAA GCGTGAG GGGCA CTCACGC TTTCGCTTAAACAGT TERM 1521 1086763 - 1086784 + T 91 -8.7 -5.03994 | opp_overlap 1086763 1086758 GCTTAAACAGTAAAA TGCCGGATT ATTA ATTCCGGCA TTTTTATCTATCAGG TERM 1522 1086784 - 1086763 - T 87 -8.7 -4.49756 | opp_overlap 1086763, overlap 1086758 GCTTAAACAGTAAAA TGCCGGATT ATTA ATTCCGGCA TTTTTATCTATCAGG csgG 1087628 - 1086795 - | putative outer membrane lipoprotein involved in curli production assembly/transport TERM 1523 1087265 - 1087278 + g 75 -4.5 -4.77165 | opp_overlap 1087265, overlap 1087266 GGATTCGGTTATTAA TGGCA ACCG TGCCG TTTTCTTGTGCCGCA TERM 1524 1087521 - 1087478 - G 85 -11.8 -3.70902 | opp_overlap 1087482, overlap 1087482 TGTTGTATACCGAAA CAAAGATCTTACCCGTCGGC GCTG GCAGATGGGTCAAATCTTTG TAGCTCTGAGCACGA TERM 1525 1087517 - 1087482 - G 77 -6.8 -4.48299 | opp_overlap 1087482, overlap 1087478 GTATACCGAAACAAA GATCTTACCCGTCGGC GCTG GCAGATGGGTCAAATC TTTGTAGCTCTGAGC csgF 1088071 - 1087655 - | putative transport/assembly protein for curli synthesis csgE 1088485 - 1088096 - | putative transport/assembly protein for curli synthesis csgD 1089140 - 1088490 - | DNA-binding transcriptional activator in two-component regulatory system TERM 1526 1088883 - 1088904 + g 93 -8.9 -4.77036 | opp_overlap 1088886 TTCAGGCGTATTTAG CAACAATAT TTTG ATATTGTTG TTTTTCCTGCTCAAA TERM 1527 1089688 - 1089676 - H 79 -4.9 -5.11836 | AGATTTAAAAGAAAA CAAAA TAT TTTTG CGTAGATAACAGCGT csgB 1089893 - 1090348 + | curlin nucleator protein, minor subunit in curli complex csgA 1090389 - 1090844 + | cryptic curlin major subunit TERM 1528 1090882 - 1090867 - gf 93 -10.4 -4.49556 | opp_overlap 1090867 TCTGTATTAAAGAAA CAGGGC GCAA GCCCTG TTTTTTTTCGGGAGA TERM 1529 1090867 - 1090882 + GF 100 -10.4 -5.75342 | opp_overlap 1090867 TCTGTATTAAAGAAA CAGGGC GCAA GCCCTG TTTTTTTTCGGGAGA csgC 1090744 - 1091235 + | putative curli production protein ymdA 1091356 - 1091667 + | hypothetical protein ymdB 1091762 - 1092295 + | hypothetical protein TERM 1530 1092345 - 1092357 + G 78 -5.5 -4.8048 | TGTTCGCAACATCCC GGTCA GTG TGGCC TTTTTCCTCTGGAGA TERM 1531 1093637 - 1093626 - g 70 -4.4 -4.46112 | CGTCATGCAAAGAAA GAGA TTGT TCTC AAAAAAGAACCCGCC TERM 1532 1093674 - 1093644 - g 100 -11.8 -5.00884 | opp_overlap 1093647, overlap 1093647 ATTGTTCTCAAAAAA GAACCCGCCACCAG TTT CTGGAAGCGGGTTA TGGTCAGACTGGCGT TERM 1533 1093671 - 1093647 - g 100 -13.5 -4.61482 | opp_overlap 1093647, overlap 1093644 GTTCTCAAAAAAGAA CCCGCCACCAG TTT CTGGAAGCGGG TTATGGTCAGACTGG TERM 1534 1093647 - 1093671 + G 80 -11.3 -3.41051 | opp_overlap 1093647 1093644 GTTCTCAAAAAAGAA CCCGCCACCAG TTT CTGGAAGCGGG TTATGGTCAGACTGG ymdC 1092297 - 1093718 + | putative hydrolase mdoC 1094883 - 1093726 - | membrane protein required for modification of periplasmic glucan TERM 1535 1094363 - 1094340 - G 100 -3.2 -5.64274 | gap 1, overlap 1094343 1094344 CGAGGCACAAAAAAA TCACCGATAGT TTT ACCATCGA-GA ATTTTTTATTCGTTT ECS88_1060 1095071 - 1094928 - | hypothetical protein ECS88_1061 1095233 - 1095075 - | hypothetical protein TERM 1536 1095721 - 1095711 - g 88 -5.4 -5.22289 | CAGCAAAGATAAAAA CGAT GAA ATCG TCAGCATGCTCGGGG mdoG 1095277 - 1096812 + | glucan biosynthesis protein, periplasmic mdoH 1096805 - 1099348 + | glucan biosynthesis: glycosyl transferase TERM 1537 1099503 - 1099473 - f 81 -11.3 -3.18094 | opp_overlap 1099479, overlap 1099479 AAAACAACGAGCCAA TAAAAATACCGGC GTTAT GCCGGTATTTTTT ACGGAAGAGGTATCA TERM 1538 1099497 - 1099479 - f 93 -10.3 -5.11063 | opp_overlap 1099479, overlap 1099473 ACGAGCCAATAAAAA TACCGGC GTTAT GCCGGTA TTTTTTACGGAAGAG TERM 1539 1099479 - 1099497 + F 100 -11 -5.00616 | opp_overlap 1099473 1099479 ACGAGCCAATAAAAA TACCGGCG TTA TGCCGGTA TTTTTTACGGAAGAG yceK 1099520 - 1099747 + | putative lipoprotein msyB 1100122 - 1099748 - | hypothetical protein mdtG 1101431 - 1100205 - | putative metabolite efflux transporter lpxL 1102523 - 1101603 - | lauryl-acyl carrier protein (ACP)-dependent acyltransferase TERM 1540 1101991 - 1102001 + g 70 -5.4 -4.41348 | TTTAAATCTTTGCGG TCGA GCA TCGA TTTATTTGAGCGCAA TERM 1541 1102342 - 1102364 + g 72 -8.4 -3.73224 | CACAGTTCCAGGTTG CGATGCACAA TTT TTGCGCGTCG TTTCATAAAACGTAA TERM 1542 1102803 - 1102790 - g 70 -6.7 -4.10429 | overlap 1102798 AACGACGCGTTAAAA GCCAA AATG TTGGC TGAGAGCGAACCGCG TERM 1543 1103451 - 1103475 + G 70 -4.1 -4.63218 | opp_overlap 1103440 AATACGCCCGTAAGG CGCGCGAGCAG GGC TTGCCGGTGCG TTTTATTGGCAAAAA TERM 1544 1103607 - 1103593 - g 70 -4.2 -4.67904 | opp_overlap 1103594, overlap 1103594 TACCAACTGTAAAAA TGATGG CTG CCATCT GTTGTTTATTCAGTG yceA 1102748 - 1103800 + | hypothetical protein TERM 1545 1103836 - 1103802 - T 72 -5.7 -4.46675 | opp_overlap 1103805 1103806, overlap 1103804 1103807 ATCCAACAGAATAAA TATCATTGCCGGATG CGTGC CATCCGGCAACATTT CACTCTTACTTCTGC TERM 1546 1103834 - 1103804 - T 75 -8.3 -3.83144 | opp_overlap 1103805 1103806, overlap 1103802 1103807 CCAACAGAATAAATA TCATTGCCGGATG CGTGC CATCCGGCAACAT TTCACTCTTACTTCT TERM 1547 1103806 - 1103832 + T 75 -10.9 -2.86618 | opp_overlap 1103804 1103802 1103807, overlap 1103805 AACAGAATAAATATC ATTGCCGGATG CGTGC CATCCGGCAAC ATTTCACTCTTACTT TERM 1548 1103831 - 1103807 - T 89 -14.4 -2.9735 | opp_overlap 1103806 1103805, overlap 1103804 1103802 ACAGAATAAATATCA TTGCCGGATG CGTGC CATCCGGCAA CATTTCACTCTTACT yceI 1104417 - 1103842 - | polyprenyl-pyrophosphate binding protein yceJ 1104987 - 1104421 - | putative cytochrome b561 TERM 1549 1104568 - 1104554 - G 75 -5.6 -4.66609 | overlap 1104555 CACGCGAGCCAAAAA TGCAGG GCA CCGGCA AAGTCAGCCTGTGCG yceO 1105388 - 1105248 - | hypothetical protein TERM 1550 1105320 - 1105310 - G 75 -5.4 -4.62163 | AGAGAAAAAGATAAA GCAT CAG ATGC TCGCGAATATTATTG TERM 1551 1105399 - 1105380 - G 95 -10.7 -4.57837 | opp_overlap 1105385 ATACTCCTGTAAAAA CGGCCTC ATTCTG GAGGCCG TAATGATGATTATTG solA 1106527 - 1105409 - | N-methyltryptophan oxidase, FAD-binding TERM 1552 1106512 - 1106526 + g 100 -3.6 -5.76633 | CGCTGCCAATAATGA TGAGAT CGT ATTTCA TTTTTTTCTCTCTGC TERM 1553 1106601 - 1106617 + r 84 -9.4 -4.20084 | opp_overlap 1106595 1106601 CCCAGAAATGGTAAA GGCACC GGTGA GGTGCC TTTTGGGTGGATGGT TERM 1554 1106617 - 1106601 - R 79 -9.4 -3.74347 | opp_overlap 1106601, overlap 1106595 CCCAGAAATGGTAAA GGCACC GGTGA GGTGCC TTTTGGGTGGATGGT bssS 1106896 - 1106642 - | biofilm regulator TERM 1555 1106871 - 1106882 + g 71 -3 -4.8236 | ACGAGCGGATGAGTC TGAA TGAC TTCA TTATTTTTTTCCATC TERM 1556 1107164 - 1107149 - R 100 -11.8 -5.85244 | AAGTAAAATAAAAAA GCCGGG GCGA CCCGGC AAAAACAAAAATCAC dinI 1107563 - 1107186 - | DNA damage-inducible protein I TERM 1557 1107396 - 1107360 - GR 71 -10.1 -2.73007 | overlap 1107359 AATACGGCGGGAAAG TTCGCCAGCCAGGGC GTCAATA GCCCCAGCTGGCAAT GGAGAAGTTTTCGCT pyrC 1108551 - 1107505 - | dihydro-orotase TERM 1558 1108650 - 1108635 - R 100 -11.8 -4.91852 | opp_overlap 1108632 TGCACGAAAAATAAA GGGCGC GAAT GCGCCC TCGTGATTAATCAGT yceB 1109217 - 1108657 - | putative lipoprotein TERM 1559 1109348 - 1109302 - R 80 -4.3 -5.31275 | gap 1, overlap 1109309 1109311 CGCCAGCAGAAAAAA CTGA-AAACGGCGGCAACCCGC GAAT ACAGGCTGCCGCGGCGGGTCAG GATTAAATCGCCATT TERM 1560 1109340 - 1109309 - R 100 -12.2 -4.55016 | overlap 1109302 1109311 AGAAAAAACTGAAAA CGGCGGCAACCCGC GAAT ACAGGCTGCCGCGG CGGGTCAGGATTAAA TERM 1561 1109338 - 1109311 - R 84 -13.4 -2.56715 | overlap 1109309 1109302 AAAAAACTGAAAACG GCGGCAACCCGC GAAT ACAGGCTGCCGC GGCGGGTCAGGATTA grxB 1109998 - 1109351 - | glutaredoxin 2 (Grx2) mdtH 1111270 - 1110062 - | putative metabolite efflux permease TERM 1562 1110087 - 1110097 + g 74 -8.2 -3.92373 | opp_overlap 1110084 1110087, overlap 1110066 CGTTCAAGCAAACGA CGCG CGG CGCG TTTCTGGCTAAACTG TERM 1563 1110773 - 1110757 - G 91 -7.9 -5.03227 | ACAGCACAAACAAAA CTGCCCC TGT GGCGCAG ACCAGGCGAAAGTCG TERM 1564 1110886 - 1110867 - G 87 -4.9 -5.30686 | opp_overlap 1110866 AACAGCGAGAAAAAA CGACCAC GCTGCT GTGGACG GATTAATTTCACCAC TERM 1565 1111771 - 1111783 + G 84 -7.7 -4.67556 | opp_overlap 1111771 ACGAAAAAGAGATTA TTGGC GTT GCCAA TTTTTCCAATGTTGT rimJ 1111506 - 1112090 + | ribosomal-protein-S5-alanine N-acetyltransferase yceH 1112101 - 1112748 + | hypothetical protein mviM 1112750 - 1113673 + | putative oxidoreductase with NAD(P)-binding Rossmann-fold domain TERM 1566 1113736 - 1113752 + F 100 -13.7 -4.11692 | ATTCGCCTCTTTCAG CGCCTGC CTT GCAGGCG TTTTGCCCGTGGGTC mviN 1113783 - 1115318 + | conserved hypothetical protein; putative inner membrane protein TERM 1567 1115354 - 1115322 - T 83 -10.8 -3.62597 | opp_overlap 1115323 1115325, overlap 1115323 1115326 CGGACGGTGTAACAA TGTAT-TCCGGCCTGC AGT GCAGGCCGGAGATA-A TCTTCAGATCGAAAT TERM 1568 1115323 - 1115354 + T 83 -12.4 -3.05963 | gap 1, opp_overlap 1115322 1115323 1115326, overlap 1115325 GGACGGTGTAACAAT GTAT-TCCGGCCTGC AGT GCAGGCCGGAGATAA TCTTCAGATCGAAAT TERM 1569 1115354 - 1115323 - T 82 -12.4 -2.77344 | gap 1, opp_overlap 1115323 1115325, overlap 1115322 1115326 GGACGGTGTAACAAT GTAT-TCCGGCCTGC AGT GCAGGCCGGAGATAA TCTTCAGATCGAAAT TERM 1570 1115325 - 1115351 + T 87 -14.4 -2.75074 | opp_overlap 1115322 1115323 1115326, overlap 1115323 ACGGTGTAACAATGT ATTCCGGCCTGC AGT GCAGGCCGGAGA TAATCTTCAGATCGA TERM 1571 1115350 - 1115326 - T 93 -15.7 -2.6563 | opp_overlap 1115325 1115323, overlap 1115322 1115323 CGGTGTAACAATGTA TTCCGGCCTGC AGT GCAGGCCGGAG ATAATCTTCAGATCG flgN 1115774 - 1115358 - | export chaperone for FlgK and FlgL flgM 1116072 - 1115779 - | anti-sigma factor for FliA (sigma 28) TERM 1572 1115816 - 1115843 + g 73 -4 -4.86621 | overlap 1115817 1115820 TGCGCTTCGTTGATC AGCGCATCGGCA ATTT TGCCGGTGTCCA TTTTTAGTTCACCGT flgA 1116807 - 1116148 - | assembly protein for flagellar basal-body periplasmic P ring TERM 1573 1117021 - 1117003 - g 72 -10.2 -3.38991 | overlap 1117001 ACGTTTTCAACAAGA GGCGCTCA ATC TGCGCGCC CAGCGTCAGGAAGTG flgB 1116962 - 1117378 + | flagellar component of cell-proximal portion of basal-body rod TERM 1574 1117408 - 1117420 + G 72 -10.5 -3.05816 | GAATATTTTTGATAT CGCCG GGT CGGCG TTAACTGCCCAGTCC flgC 1117382 - 1117786 + | flagellar component of cell-proximal portion of basal-body rod TERM 1575 1118216 - 1118200 - g 77 -8.7 -4.0371 | overlap 1118187 CAGGCGGCAGACAAA GTGACGG CCA CCATCAC CGATAAAAACGGCGC TERM 1576 1118240 - 1118226 - g 76 -3.5 -4.88736 | gap 1, opp_overlap 1118227, overlap 1118227 CATCACCGATAAAAA CGG-CG CGGT CGTCCG TACCATTGATATCGG flgD 1117798 - 1118493 + | flagellar hook assembly protein TERM 1577 1119449 - 1119437 - g 70 -5.5 -4.32951 | opp_overlap 1119441 1119442, overlap 1119442 ATTCCAACGAACAAA CCCAA CTG CTGGG GCAGATTGTACTGGC flgE 1118518 - 1119723 + | flagellar hook protein TERM 1578 1119811 - 1119799 - g 74 -10.5 -3.24329 | opp_overlap 1119797, overlap 1119797 GACGCTGAATCAACA GGCGG TAA CCGCC AGTAATCTGGCCAAT flgF 1119743 - 1120498 + | flagellar component of cell-proximal portion of basal-body rod flgG 1120670 - 1121452 + | flagellar component of cell-distal portion of basal-body rod TERM 1579 1121460 - 1121478 + F 72 -8.1 -3.96337 | AACTCTAAGGCTTAA CCGGTGG CAGGT TCACCGG TTTACTGATTTTTGA flgH 1121505 - 1122203 + | flagellar protein of basal-body outer-membrane L ring flgI 1122215 - 1123312 + | flagellar basal body P-ring protein flgJ 1123312 - 1124253 + | muramidase TERM 1580 1125627 - 1125616 - g 72 -5.8 -4.30014 | overlap 1125609 CTGACGAAGCGAAAA TCGC CATG GCGA GCGAAGAAGATGCGG flgK 1124319 - 1125962 + | flagellar hook-filament junction protein 1 TERM 1581 1126655 - 1126644 - g 77 -7.2 -4.56969 | overlap 1126631 1126645 1126646 AAGCGGATAAAGAAA CCGC CGCT GCGG CACTGGATAAAACCA flgL 1125974 - 1126927 + | flagellar hook-filament junction protein TERM 1582 1126969 - 1126997 + T 100 -16 -5.54264 | overlap 1126994 TGGGTATGTTTTGTC TGCCCGCTCTGG GATCG CCGGGGCGGGCA TTTTTTTGCCTATTT TERM 1583 1127082 - 1127101 + T 81 -10.7 -3.45634 | opp_overlap 1127082 AGATGAAATAAAAAA GCCCTGG CAGTTA CCAGGGC TTGATTGCTTGAGCT TERM 1584 1127101 - 1127082 - T 100 -11.4 -5.69793 | opp_overlap 1127082 AGATGAAATAAAAAA GCCCTGGC AGTT ACCAGGGC TTGATTGCTTGAGCT rne 1130307 - 1127122 - | fused ribonucleaseE: endoribonuclease ; RNA-binding protein ;RNA degradosome binding protein TERM 1585 1128030 - 1128065 + g 78 -8.3 -4.15044 | gap 1, overlap 1128019 GTTCTGTGCGTGGAG CTGGCGCTTCCTGAAC AATTG GTTC-GGCAGCGACAG TTTCTTCAACCACCG TERM 1586 1128285 - 1128312 + g 71 -3.3 -4.75174 | overlap 1128282 1128278 TACGTTCACGACGCG GCGCTTGCTGC TCGTCT GTGGTACGCGC TTTTTCCGTTACCTC TERM 1587 1129705 - 1129719 + g 88 -5.6 -5.18357 | CAGGAACGGAGCCGG GCGGCT TTC AGCGGC TTTTTTGATGGCTTC rluC 1130880 - 1131839 + | 23S rRNA pseudouridylate synthase TERM 1588 1131910 - 1131863 - T 79 -11.8 -2.64194 | opp_overlap 1131871 1131872, overlap 1131862 1131882 TATAAACCTGATAAT GGGCGGTTGGCCTGATAAGGCG TTTA CGCCGCATCAGGCCGCCAGCAC CGATTGCCGGATGCG yceF 1132535 - 1131951 - | hypothetical protein TERM 1589 1132666 - 1132694 + H 80 -10.3 -3.74077 | opp_overlap 1132672, overlap 1132672 GTGTGCGAATTATTG GCAAAAGGCAACC ACA GGCTGCCTTTTTC TTTGACTCTATGACG TERM 1590 1132672 - 1132688 + H 91 -7.9 -5.31519 | opp_overlap 1132672, overlap 1132666 GAATTATTGGCAAAA GGCAACC ACA GGCTGCC TTTTTCTTTGACTCT TERM 1591 1132688 - 1132672 - H 82 -10.1 -4.12902 | opp_overlap 1132666 1132672 GAATTATTGGCAAAA GGCAACC ACA GGCTGCC TTTTTCTTTGACTCT yceD 1132734 - 1133255 + | hypothetical protein rpmF 1133307 - 1133480 + | 50S ribosomal subunit protein L32 TERM 1592 1133496 - 1133481 - f 71 -9 -3.34895 | opp_overlap 1133467 GTCATCGCTAAGTAA TCACGC GTCT GCGTGA TGAAGCTTAGTGAGG TERM 1593 1133617 - 1133646 + G 78 -10.7 -3.51032 | overlap 1133618 1133621 TTTTGGCCCTTCCGT GACAGTGCCTGCA GCAT TGCAGGCACTGAA TTCTAATTCGCAACT TERM 1594 1133618 - 1133645 + G 85 -14.2 -2.70298 | overlap 1133617 1133621 TTTGGCCCTTCCGTG ACAGTGCCTGCA GCAT TGCAGGCACTGA ATTCTAATTCGCAAC TERM 1595 1133621 - 1133642 + G 90 -14.5 -2.63347 | overlap 1133618 1133617 GGCCCTTCCGTGACA GTGCCTGCA GCAT TGCAGGCAC TGAATTCTAATTCGC plsX 1133561 - 1134631 + | fatty acid/phospholipid synthesis protein TERM 1596 1134820 - 1134772 - g 79 -3.9 -5.03314 | gap 1, opp_overlap 1134781, overlap 1134774 CCGATTTGGAAAAAA TGGTGGATACCTCTGACGAGTG GATTGT CACTCGT-ACCGGTATCCGCGA ACGCCACATTGCCGC fabH 1134699 - 1135652 + | 3-oxoacyl-[acyl-carrier-protein] synthase III fabD 1135668 - 1136597 + | malonyl-CoA-[acyl-carrier-protein] transacylase TERM 1597 1136649 - 1136629 - g 90 -7.5 -4.86621 | overlap 1136631 ATTTTGAAGGAAAAA TCGCACTGG TAA CCGGTGCAA GCCGCGGAATTGGCC fabG 1136610 - 1137344 + | 3-oxoacyl-[acyl-carrier-protein] reductase acpP 1137555 - 1137791 + | acyl carrier protein (ACP) TERM 1598 1137827 - 1137799 - f 72 -9.6 -3.15056 | gap 1, opp_overlap 1137800 1137803, overlap 1137797 AGGCGTAAGTGAACA TCTCCAGGCGGTC GTTC GACCGCCTG-AGT TTTATCTTTTGTCCC TERM 1599 1137800 - 1137826 + F 100 -13.1 -4.94487 | gap 1, opp_overlap 1137799 1137797, overlap 1137803 GGCGTAAGTGAACAT CTCCAGGCGGTC GTTC GACCGCCTG-AG TTTTATCTTTTGTCC TERM 1600 1137803 - 1137824 + F 100 -15.9 -2.71413 | opp_overlap 1137799 1137797, overlap 1137800 GTAAGTGAACATCTC CAGGCGGTC GTTC GACCGCCTG AGTTTTATCTTTTGT TERM 1601 1138251 - 1138231 - g 70 -3.9 -4.68384 | overlap 1138236 ACTGATCGAAGAAAA CCACACATC TCT GATGAACGG TGGTCCACGTAAGAT TERM 1602 1138547 - 1138522 - g 74 -10.3 -3.51329 | TACCCGCAATGATAA CCCGCAAGCGG CGAG CCGCCCGTGGG ATAAAGAGCGTGATG fabF 1137878 - 1139119 + | 3-oxoacyl-[acyl-carrier-protein] synthase II TERM 1603 1139145 - 1139160 + F 100 -8.2 -5.52096 | opp_overlap 1139145 TCCACCCTTATAAAA GGTCCG CTTG CGGGCC TTTTTTCTTAGCTTT TERM 1604 1139160 - 1139145 - f 73 -6 -4.38712 | opp_overlap 1139145 TCCACCCTTATAAAA GGTCCG CTTG CGGGCC TTTTTTCTTAGCTTT pabC 1139239 - 1140048 + | 4-amino-4-deoxychorismate lyase component of para-aminobenzoate synthase multienzyme complex yceG 1140051 - 1141073 + | putative conserved membrane associated protein TERM 1605 1141522 - 1141507 - g 91 -11.8 -4.07885 | GAGGTTGGCTTAAAA CGCGCG CGTG CGCGCG GCGAGCTGGATCGTA tmk 1141063 - 1141704 + | thymidylate kinase TERM 1606 1141750 - 1141740 - g 81 -6.8 -4.59773 | CCTGATTTCGAAAAA CTGG TAG CCAG CTATCAGGCCGGAAG TERM 1607 1142282 - 1142309 + G 90 -12 -3.90922 | gap 1 CGCATTGCGCTTAAG CGCCGGT-TCGCC TGG GGCGGCACTGGCG TTGTTTCAGGGAGAT TERM 1608 1142484 - 1142472 - g 81 -9.1 -4.09864 | ATGGATGCGCTAAAA CGCCA TCA TGGCG CTGCGCAGGTGACCA holB 1141701 - 1142705 + | DNA polymerase III, delta prime subunit TERM 1609 1142886 - 1142896 + G 70 -6.8 -4.00512 | TCTGGTAGGCGAACG CGAC AAC GTCG TATTTTCTTGTGGCG ycfH 1142716 - 1143513 + | putative metallodependent hydrolase TERM 1610 1143585 - 1143558 - f 79 -9.2 -3.93057 | gap 1, overlap 1143559 GCTAAAACGAGTAAA GTTCACCG-CCGA AAA TCGGGCGGTGAAT AACCACGTTTGAAAT TERM 1611 1143584 - 1143559 - f 82 -12.7 -2.95111 | gap 1, overlap 1143558 CTAAAACGAGTAAAG TTCACCG-CCGA AAA TCGGGCGGTGAA TAACCACGTTTGAAA TERM 1612 1144652 - 1144635 - g 70 -4 -4.61566 | opp_overlap 1144635 1144633 TGCTAAACCAGAAAA CCGCGC GAAAGT GGGCGG TATTATGATCTCCGC ptsG 1143808 - 1145241 + | fused glucose-specific PTS enzymes: IIBcomponent ; IIC component TERM 1613 1145283 - 1145266 - T 86 -12.7 -3.25823 | opp_overlap 1145266 CGTTGGGGAGACTAA GGCAGCC AGAT GGCTGCC TTTTTTACAGGTGTT TERM 1614 1145266 - 1145283 + T 100 -12.7 -5.04987 | opp_overlap 1145266 CGTTGGGGAGACTAA GGCAGCC AGAT GGCTGCC TTTTTTACAGGTGTT fhuE 1147490 - 1145301 - | ferric-rhodotorulic acid outer membrane transporter TERM 1615 1145996 - 1146021 + g 79 -4.7 -4.88736 | gap 1, opp_overlap 1145994 1145996 CATTGATGTCAAACA CCAGACCAGCGT AAG GCG-TGGTGTGG TTTTTCTCCATGCTG TERM 1616 1148048 - 1148038 - g 75 -5.4 -4.59773 | CCGTAGCGGCAAAAA TTGC TGA GCAA GAAGGTATTGCCGAA hinT 1147824 - 1148183 + | purine nucleoside phosphoramidase ycfL 1148186 - 1148563 + | hypothetical protein ycfM 1148577 - 1149218 + | putative outer membrane lipoprotein TERM 1617 1149228 - 1149249 + G 91 -9.4 -4.58685 | CAATAATCCCCTCAC GCGCGACG AATTGC TGTCGCGC TTTTTCCCGCAGTTT ycfN 1149199 - 1150023 + | thiamin kinase TERM 1618 1150928 - 1150938 + G 70 -6.8 -4.08706 | opp_overlap 1150928 CCGATCAAGGCAGAA CGTG TTA CACG TTTGTATCATAAAGG nagZ 1150034 - 1151059 + | beta N-acetyl-glucosaminidase ycfP 1151082 - 1151624 + | hypothetical protein ndh 1152023 - 1153327 + | respiratory NADH dehydrogenase 2/cupric reductase TERM 1619 1153394 - 1153426 + F 79 -12 -2.60723 | opp_overlap 1153403, overlap 1153393 TGGTACGAGCGGTAG GCCTGATAAGACGC GTTAA GCGTCGCATCAGGC ATTCCTTCAGACTCC ycfJ 1153554 - 1154093 + | hypothetical protein TERM 1620 1154116 - 1154142 + T 91 -6.6 -5.41143 | opp_overlap 1154116 GTACTCTGCAATTTA GCCCCTCA TTCGCTCAAGC TGAGGGGC TTTTTTTGCGACCTA ycfQ 1154787 - 1154155 - | putative DNA-binding transcriptional regulator TERM 1621 1154743 - 1154753 + g 100 -2.4 -5.77853 | GTCGAACACTTTTGG GCGG CCA CGGC TTTTTTTTACACATT TERM 1622 1155058 - 1155045 - g 79 -2.3 -5.30575 | opp_overlap 1155050 GAAAAACGTAAAAAA CCTCA TCGC TGCGG CGATTTTAAGCTCCA TERM 1623 1155050 - 1155061 + G 70 -5.8 -4.15006 | opp_overlap 1155045 ACGTAAAAAACCTCA TCGC TGCG GCGA TTTTAAGCTCCATGT ycfR 1155028 - 1155285 + | hypothetical protein TERM 1624 1155324 - 1155350 + T 100 -18.8 -5.60993 | CTACTGCTGATTTTT TCCCCGCGACAT GCC GTGTCGCGGGGA TTTTTTTATCCGAGC ycfS 1156329 - 1155367 - | hypothetical protein mfd 1159920 - 1156474 - | transcription-repair coupling factor TERM 1625 1157436 - 1157448 + g 70 -6.9 -4.01564 | GTACCAGTTCTGCCA GCCGT TCG GCGGC TTTCTGGATGTTTTC TERM 1626 1158691 - 1158701 + g 70 -5.4 -4.4078 | opp_overlap 1158678 AAGACGCATAATGCG TTGC GGA GCAA TTTTAATTCGCGCGA TERM 1627 1158801 - 1158816 + g 82 -3.2 -5.20333 | opp_overlap 1158797, overlap 1158797 CGAGGAACTTACGCA GCGC ATCCAGCG GCGC TTTTTGTTGTGCCTG TERM 1628 1160043 - 1160026 - R 90 -12.7 -3.30701 | opp_overlap 1160026 GTTTAGCAAATTGAA TCGCCCC GGCT GGGGCGA TGGCTTAGCGGGAGT TERM 1629 1160026 - 1160043 + r 81 -12.7 -2.52543 | opp_overlap 1160026 GTTTAGCAAATTGAA TCGCCCC GGCT GGGGCGA TGGCTTAGCGGGAGT ycfT 1161121 - 1160048 - | conserved hypothetical protein; putative inner membrane protein TERM 1630 1160466 - 1160451 - G 78 -9 -4.0031 | opp_overlap 1160465 ACGGCCAGCAAAGAA GCCATC AGCA GATGGC GGCGCAACGGTACCG TERM 1631 1162113 - 1162100 - g 90 -8.1 -4.77157 | overlap 1162093 TTAAGTCAGCAAAAA CTGCC TGAA GGCAG CAAATGGCAGGACTG TERM 1632 1162207 - 1162219 + G 84 -10.5 -3.72051 | GCTGAGCCTGATTGT CGCCG TTG CGGCG TTTAACATTATTACC lolC 1161383 - 1162582 + | outer membrane-specific lipoprotein transporter subunit ; membrane component of ABC superfamily lolD 1162575 - 1163276 + | outer membrane-specific lipoprotein transporter subunit ; ATP-binding component of ABC superfamily lolE 1163276 - 1164520 + | outer membrane-specific lipoprotein transporter subunit ; membrane component of ABC superfamily ycfX 1164549 - 1165460 + | N-acetyl-D-glucosamine kinase TERM 1633 1165540 - 1165524 - g 75 -4.4 -4.85782 | gap 1, opp_overlap 1165524 1165527 1165530, overlap 1165526 TTTCGTAAAAATAAA CG-TCGC CTGC GCGAGCG TTTGCGTCAGCGTAT TERM 1634 1165543 - 1165554 + G 82 -2.2 -5.41143 | overlap 1165530 1165527 GCCTGCGCGAGCGTT TGCG TCAG CGTA TTTTTTTCAGAGATA cobB 1165476 - 1166297 + | deacetylase of acetyl-CoA synthetase, NAD-dependent ycfZ 1167325 - 1166435 - | conserved hypothetical protein; putative inner membrane protein TERM 1635 1167059 - 1167047 - GT 70 -4.7 -4.4522 | opp_overlap 1167047 TAAAACCACAATAAA CGGTG CAA CTCCG GTTTGTTGGCGAAAA ymfA 1167681 - 1167220 - | conserved hypothetical protein; putative inner membrane protein TERM 1636 1167729 - 1167708 - R 100 -10.1 -5.63517 | opp_overlap 1167708 1167707, overlap 1167709 TTGCTAAATAAAAAA CGGGCGGTA ATAC CACCGCCCA CTTGCTGAATTAACG TERM 1637 1167728 - 1167709 - R 91 -11.4 -3.97026 | opp_overlap 1167708 1167707, overlap 1167708 TGCTAAATAAAAAAC GGGCGGTA ATAC CACCGCCC ACTTGCTGAATTAAC potD 1168785 - 1167739 - | polyamine transporter subunit ; periplasmic-binding component of ABC superfamily potC 1169576 - 1168782 - | polyamine transporter subunit ; membrane component of ABC superfamily potB 1170400 - 1169573 - | polyamine transporter subunit ; membrane component of ABC superfamily potA 1171550 - 1170414 - | polyamine transporter subunit ; ATP-binding component of ABC superfamily ECS88_1141 1171780 - 1171529 - | hypothetical protein pepT 1171800 - 1173026 + | peptidase T TERM 1638 1173060 - 1173034 - T 100 -15.2 -4.32201 | opp_overlap 1173034, overlap 1173035 GGAAGTAAGCGAAAA GGGATGCGGCAT GTG ATGCCGCATCCG GCTTAAATCCAAACT TERM 1639 1173059 - 1173035 - T 100 -18.7 -3.18598 | opp_overlap 1173034, overlap 1173034 GAAGTAAGCGAAAAG GGATGCGGCAT GTG ATGCCGCATCC GGCTTAAATCCAAAC ycfD 1174196 - 1173075 - | hypothetical protein phoQ 1175732 - 1174272 - | sensory histidine kinase in two-compoent regulatory system with PhoP TERM 1640 1174881 - 1174891 + g 77 -8.2 -4.13014 | CGTACTTTGCAGCAC CGCC AGT GGCG TTTTCAGACTATGGG phoP 1176403 - 1175732 - | DNA-binding response regulator in two-component regulatory system with PhoQ TERM 1641 1176563 - 1176532 - R 77 -9.4 -3.6968 | gap 1, opp_overlap 1176533, overlap 1176533 1176535 GGATAATCTTAATAA GCAG-GCCGGACAGC ATC GCCATCCGGCACTGT TTTGAGGCTTATTTC TERM 1642 1176533 - 1176562 + r 80 -8.5 -4.17523 | gap 1, opp_overlap 1176532 1176533 1176535 GATAATCTTAATAAG CAG-GCCGGACAGC ATC GCCATCCGGCACTG TTTTGAGGCTTATTT TERM 1643 1176562 - 1176533 - R 85 -12.9 -2.81326 | gap 1, opp_overlap 1176533, overlap 1176532 1176535 GATAATCTTAATAAG CAG-GCCGGACAGC ATC GCCATCCGGCACTG TTTTGAGGCTTATTT TERM 1644 1176559 - 1176535 - R 70 -9.9 -2.94759 | opp_overlap 1176533, overlap 1176533 1176532 TAATCTTAATAAGCA GGCCGGACAGC ATC GCCATCCGGCA CTGTTTTGAGGCTTA purB 1177942 - 1176572 - | adenylosuccinate lyase TERM 1645 1176941 - 1176961 + g 74 -8.3 -3.90588 | opp_overlap 1176955 GTCGGTCAGGTCACG CTGCCAG CGGGAAA CTGGCAG TTTGCTTGCCAGGTG hflD 1178587 - 1177946 - | putative inner membrane protein; lambda lysogenization regulator, UPF0274 family TERM 1646 1178447 - 1178428 - G 75 -5.7 -4.59773 | gap 1, opp_overlap 1178429, overlap 1178429 CGCTACCGCCAAAAA CCGCCAGC GTTGA GCTGG-GG TTCATATCGATAATA trmU 1179729 - 1178623 - | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase TERM 1647 1179639 - 1179625 - G 72 -7.8 -3.86346 | opp_overlap 1179627 CCAGTTCTTCATAAA CAGGCC TTC GACCTG ATATCCCTGTTGTTG TERM 1648 1179757 - 1179780 + r 70 -6 -4.18018 | gap 1, opp_overlap 1179751 GACATTGAACTTCAA GGCGGCGT-AT TCT ATCACGCAGCC TTTTAGATGACACCC ymfB 1180244 - 1179783 - | bifunctional thiamin pyrimidine pyrophosphate hydrolase and thiamin pyrophosphate hydrolase ymfC 1180907 - 1180254 - | 23S rRNA pseudouridine synthase TERM 1649 1180855 - 1180867 + g 77 -2.7 -5.11613 | overlap 1180856 CGCTTAACCTGGTGA TTTCT AAA AGAAG TTTTTTGCATGGTAT icd 1181079 - 1182329 + | isocitrate dehydrogenase, specific for NADP+; e14 prophage TERM 1650 1182352 - 1182376 + T 89 -10 -4.49981 | opp_overlap 1182355, overlap 1182355 ATGTGTTAAATATTG AAACGGGCGT ATAAC ACGCCCGTTG TTTTATGATGATGTA TERM 1651 1182373 - 1182355 - T 100 -12.4 -3.81137 | opp_overlap 1182352 1182355 TGTTAAATATTGAAA CGGGCGTA TAA CACGCCCG TTGTTTTATGATGAT TERM 1652 1182355 - 1182373 + T 95 -11.7 -4.35644 | opp_overlap 1182355, overlap 1182352 TGTTAAATATTGAAA CGGGCGT ATAAC ACGCCCG TTGTTTTATGATGAT int 1183585 - 1182443 - | phage integrase TERM 1653 1182598 - 1182619 + g 72 -6.5 -4.39002 | opp_overlap 1182597 GCTGCTCATGAAATG TGGGCGCAG TTCC TTGCTCCCA TTTTATGCCACATTT ymfG 1183811 - 1183575 - | putative excisionase TERM 1654 1183903 - 1183945 + r 74 -2.2 -5.22289 | opp_overlap 1183905, overlap 1183886 1183904 1183905 1183907 1183911 TCTTGACTGGTCATA GAGATAAATTTAATGCTG AGAAATG CAGTATTGAATTTATCAA TTTTTCTATTTCCTG ECS88_1154 1184190 - 1183951 - | conserved hypothetical protein from phage origin ECS88_1155 1184503 - 1184174 - | conserved hypothetical protein from phage origin ECS88_1156 1184515 - 1184682 + | hypothetical protein; putative exported protein TERM 1655 1184797 - 1184783 - T 100 -7.8 -5.64873 | GCGAACAATAAAAAA GGAGCC TGT AGCTCC CTGATAATTTTGCTT ECS88_1157 1185097 - 1184915 - | conserved hypothetical protein from phage origin ECS88_1158 1185299 - 1185108 - | conserved hypothetical protein from phage origin ECS88_1159 1185460 - 1185272 - | conserved hypothetical protein from phage origin ECS88_1160 1186131 - 1185451 - | exonuclease from phage origin ECS88_1161 1186913 - 1186128 - | Recombination protein bet from phage origin ECS88_1162 1187215 - 1186919 - | putative host-nuclease inhibitor protein Gam of bacteriophage ECS88_1163 1187567 - 1187403 - | Regulatory protein CIII TERM 1656 1187614 - 1187599 - R 82 -6.8 -4.9755 | opp_overlap 1187599 ATACATAACGAAAAA CGCCTC GAGT GAAGCG TAATTGGTATGCGGT ECS88_1164 1188008 - 1187640 - | Putative single-stranded DNA binding protein of prophage TERM 1657 1188056 - 1188035 - R 95 -8 -5.4251 | overlap 1188037 CTCATAGATAAAAAA TCGCCCTC ACACTG GAGGGCAA AGAAGATTTCCAATA TERM 1658 1188108 - 1188153 + r 100 -12.7 -4.53119 | TTTAGTTACGAGCGA CATTGCTCCGTGTATTCACTC GTTG GAATGAATACACAGTGCAGTG TTTATTCTGTTATTT ECS88_1165 1188391 - 1188191 - | Restriction inhibitor protein ral (Antirestriction protein) ECS88_1166 1188461 - 1188375 - | conserved hypothetical protein from phage origin TERM 1659 1188769 - 1188787 + G 76 -7.4 -4.25859 | overlap 1188766 1188771 AATCCTTCCTCATTA CTGGATGT ATT ACATCCTG TTGTTTTGCGTTAGC TERM 1660 1188771 - 1188785 + G 72 -8.6 -3.72228 | overlap 1188769 1188766 TCCTTCCTCATTACT GGATGT ATT ACATCC TGTTGTTTTGCGTTA ECS88_1167 1188605 - 1189186 + | Superinfection exclusion protein B ECS88_1168 1189447 - 1189668 + | hypothetical protein ECS88_1169 1190012 - 1189860 - | hypothetical protein TERM 1661 1189889 - 1189906 + gT 79 -9.8 -3.77808 | opp_overlap 1189889 GTGAGGCAAAGAAAA CCCGGC GCTGAG GCCGGG TTGTATTATGCTGCA TERM 1662 1189906 - 1189889 - GT 100 -9.8 -4.90778 | opp_overlap 1189889 GTGAGGCAAAGAAAA CCCGGC GCTGAG GCCGGG TTGTATTATGCTGCA ECS88_1170 1190664 - 1189912 - | conserved hypothetical protein from phage origin ECS88_1171 1191959 - 1191258 - | Repressor protein CI from phage origin TERM 1663 1191953 - 1191965 + Gg 76 -4.1 -4.99056 | TACTGGAACCATCCA TGCAC AAT GTGTA TTTTTACTTGTATTC TERM 1664 1191987 - 1191997 + GH 100 -4 -5.85737 | opp_overlap 1191987 CTTGTATTCGCAAAG TACA TAT TGTA TTTTTTTATTCGTGT ECS88_1172 1191858 - 1192244 + | putative repressor protein from lambdoid phage (similar to Cro protein) TERM 1665 1192252 - 1192236 - fH 70 -6.5 -4.1891 | opp_overlap 1192232 1192246, overlap 1192237 CCGCCGGAACACAAA GCCGCTT AAT AAGCGGA TCCGCTCTTTGTAAC TERM 1666 1192251 - 1192237 - fH 73 -10 -3.11024 | opp_overlap 1192232 1192246, overlap 1192236 CGCCGGAACACAAAG CCGCTT AAT AAGCGG ATCCGCTCTTTGTAA TERM 1667 1192654 - 1192635 - g 100 -9.2 -5.5112 | opp_overlap 1192635 CTCACCAATAAAAAA CGCCCGGC GGCA ACCGAGCG TTCTGAACAAATCCA ECS88_1173 1192386 - 1192682 + | Regulatory protein CII from phage origin TERM 1668 1193147 - 1193116 - f 90 -4.4 -5.58051 | opp_overlap 1193121, overlap 1193118 1193119 1193121 1193133 AAAGAAAAAAGAAAA GATTATTCGTCAGA GAAT TCTGGCGAATCCTC TGACCAGCCAGAAAA ECS88_1176 1193544 - 1194245 + | putative replication protein P of bacteriophage ECS88_1177 1194242 - 1194532 + | Ren protein from phage origin TERM 1669 1194580 - 1194559 - f 74 -9.4 -3.42256 | opp_overlap 1194559, overlap 1194557 ACTGAGCTAATAACA GGCCTGCA GGTAAT CGCAGGCC TTTTTATTTGGGGGA TERM 1670 1194559 - 1194580 + F 95 -8.7 -5.27335 | gap 1, opp_overlap 1194559 1194557 ACTGAGCTAATAACA GGCCTGCAGG TAA TC-GCAGGCC TTTTTATTTGGGGGA ECS88_1178 1194588 - 1195046 + | recombination protein ninB from phage origin TERM 1671 1195093 - 1195103 + GF 75 -4.6 -4.7373 | overlap 1195085 1195083 GGACTGCTGGCAAAC GCCG CTT TGGC TTTTTGATGCACTGG ECS88_1179 1194983 - 1195570 + | putative DNA N-6-adenine-methyltransferase from phage origin ECS88_1180 1195704 - 1196087 + | conserved hypothetical protein, putative protein ninX from phage origin rusA 1196294 - 1196656 + | endonuclease RUS; DLP12 prophage ybcQ 1196879 - 1197262 + | putative antitermination protein Q homolog; DLP12 prophage TERM 1672 1197313 - 1197294 - T 90 -9.2 -4.79667 | overlap 1197295 AAAAGTTATTAAAAA TGGGGCGT GGAA ACGCCCCC AAAATAAAGGGTAAT TERM 1673 1197312 - 1197295 - T 93 -12.7 -3.46174 | overlap 1197294 AAAGTTATTAAAAAT GGGGCGT GGAA ACGCCCC CAAAATAAAGGGTAA TERM 1674 1197399 - 1197434 + T 100 -14.2 -4.7497 | gap 1, overlap 1197401 CTTGAGGGCTCCACT TATATGTTGC-GGAGGC AAA GCCTCCCGCAACATATC TTTTTCGTAAGTCAG TERM 1675 1197401 - 1197432 + T 100 -16.8 -3.99327 | gap 1, overlap 1197399 TGAGGGCTCCACTTA TATGTTGC-GGAGGC AAA GCCTCCCGCAACATA TCTTTTTCGTAAGTC nmpC 1198593 - 1197451 - | putative outer membrane porin TERM 1676 1198963 - 1198978 + H 84 -7.5 -4.95854 | opp_overlap 1198963 GTCACACAGCTTAAA CCCGC CGTCGA GCGGG TTTTTCCATTTTTTG TERM 1677 1199180 - 1199190 + G 72 -4.6 -4.67904 | overlap 1199162 1199175 CCTCAGCAGGTAGTG CCGG GTA CTGG TTTTTACAGTTGCTC essD 1199122 - 1199337 + | putative phage lysis protein S; DLP12 prophage ybcS 1199337 - 1199834 + | putative lysozyme; DLP12 prophage rzpD 1199831 - 1200292 + | putative murein endopeptidase; DLP12 prophage TERM 1678 1200317 - 1200292 - T 89 -14.1 -2.90212 | overlap 1200277 1200294 TGAGCAGTGCAGATA GAGCTGCCCAT ATCG ATGGGCAACTC ATGCAATTATTGTGA TERM 1679 1200315 - 1200294 - T 76 -10.9 -3.002 | overlap 1200277 1200292 AGCAGTGCAGATAGA GCTGCCCAT ATCG ATGGGCAAC TCATGCAATTATTGT borD 1200617 - 1200324 - | putative lipoprotein; DLP12 prophage ECS88_1188 1201044 - 1201424 + | putative tonB-like membrane protein encoded within prophage TERM 1680 1201539 - 1201517 - f 95 -12.8 -3.70853 | opp_overlap 1201514 1201514 1201509 GGAATGATGGAAGAA GGCGTTGTAT GCC ACACAACGCC TCACTGTTCATTTCT ECS88_1189 1201631 - 1201813 + | conserved hypothetical protein from phage origin TERM 1681 1202191 - 1202204 + G 73 -3.7 -4.7889 | overlap 1202190 CAACAGGTTACGGGG CGGCG ACCT CGCGG TTTTTCACTATTTAT ECS88_1190 1202040 - 1202294 + | hypothetical protein TERM 1682 1202350 - 1202296 - f 87 -11.5 -3.57462 | opp_overlap 1202296 TATTGCATCCGTAAA GGTCCGACATGAAAGTGTCCGAAAA TGCCT TTTTCTGGCGTTTTCATGTCGGGCC TTGTATTTGATAATG TERM 1683 1202296 - 1202350 + F 100 -20.3 -3.87323 | opp_overlap 1202296 TATTGCATCCGTAAA GGTCCGACATGAAAGTGTCCGAAAA TGCCT TTTTCTGGCGTTTTCATGTCGGGCC TTGTATTTGATAATG TERM 1684 1202664 - 1202649 - gf 73 -6.1 -4.3739 | TACCGGCTCACAAAA GCGCA GGCAGA TGCGC AGGAACTGAAAAATG ECS88_1191 1202376 - 1202924 + | Terminase small subunit (Gp1) TERM 1685 1203326 - 1203341 + GF 73 -4 -4.74132 | gap 1, opp_overlap 1203326 AACACCGCGATAATA CGC-TCA CCC TGAAGCG TTTTTCCTCCGGTGT TERM 1686 1203480 - 1203463 - gf 70 -4.1 -4.59773 | overlap 1203465 CCGGATGTTGAAAAA GAGGGTT CGCC AACCCTG CTGGGGGATAAACGT TERM 1687 1203587 - 1203571 - gf 72 -4.4 -4.70659 | gap 1 TGCCAGATCGAAAAA GCCG-CT AACG AGTCGGC ACACTTCATGCGTTT TERM 1688 1203649 - 1203665 + GF 71 -7.9 -3.77087 | CAGTATCTGAAATTT GGCGATG ATG CCTCGCC TTTCGGTCTTAAGTG TERM 1689 1203805 - 1203786 - gf 72 -7.1 -4.09685 | GTGGATCTGTGAAAA CACGGGC ATGTGG ACCCGTG ACGGCCTGATGTTTT TERM 1690 1204258 - 1204240 - gf 88 -2.3 -5.5112 | overlap 1204242 GCGATCAACAAAAAA TACCGCC ATGCA GACGGAA CCGAAATGACCATTT TERM 1691 1204423 - 1204409 - gf 89 -8.5 -4.63527 | TCACCATGCCAAAAA CCCGC AATCA GCGGG GCGTGTATCTGTGTG TERM 1692 1204531 - 1204549 + GF 76 -3.8 -5.00616 | overlap 1204533 TCGTATGCTATCCGT TTTCCTGA TGA TCCGGAGA TTTTTTCGCAGACAG ECS88_1192 1202854 - 1204824 + | Terminase large subunit (Gp2) ECS88_1193 1204808 - 1205014 + | Head-stabilizing protein (Head protein gp3) TERM 1693 1205427 - 1205395 - gf 93 -10.6 -4.41494 | opp_overlap 1205392, overlap 1205397 GACGTGGAAGGAAAA CGCACGTTCACGGA ATTTA TCCGTGAAGGTGTG GGCGTTCATGCGTTT TERM 1694 1205425 - 1205397 - gf 79 -11.8 -2.54166 | opp_overlap 1205392, overlap 1205395 CGTGGAAGGAAAACG CACGTTCACGGA ATTTA TCCGTGAAGGTG TGGGCGTTCATGCGT TERM 1695 1206524 - 1206505 - gf 73 -4.9 -4.59773 | overlap 1206506 GCTGAGCGGCAAAAA GCCGGAC TCTCAC GTCCGGT GTGGATAGAGCAGGC ECS88_1194 1204981 - 1206603 + | Portal protein (Head protein Gp4) TERM 1696 1206653 - 1206668 + G 91 -7.5 -5.07652 | CCGCTGCTTCTGGAG CCCGC CTATGC GCGGG TTTTCTTTTGCGCGC ECS88_1195 1206593 - 1208098 + | Head-tail preconnector protein GP5 [Contains: Scaffold protein GP6 (Head protein GP6)] TERM 1697 1208449 - 1208434 - g 77 -3.2 -5.1244 | opp_overlap 1208442, overlap 1208435 GGATGAACACAAAAA GGCCAA CGCC TTTGCC GGCAGTGCCCTGAGT ECS88_1196 1208135 - 1208482 + | Head decoration protein (Head protein GPshp) TERM 1698 1208487 - 1208515 + F 79 -9 -3.91897 | gap 1, overlap 1208489 CGCTGCCGTAACACG TTA-TCAGGCCAC CGCG GTGGCCTGACTGA TTTCTGAATGAAAGG TERM 1699 1208489 - 1208512 + F 76 -11 -3.02745 | overlap 1208487 CTGCCGTAACACGTT ATCAGGCCAC CGCG GTGGCCTGAC TGATTTCTGAATGAA TERM 1700 1208692 - 1208682 - g 88 -8.2 -4.652 | opp_overlap 1208682 1208684, overlap 1208673 1208683 1208684 AAATTACCGGAAAAA CGCC GGT GGCG GCCTATGTCTCCCCG ECS88_1197 1208540 - 1209568 + | Major head protein (Head protein gp7) TERM 1701 1209574 - 1209599 + GF 100 -9.7 -5.00616 | gap 1, opp_overlap 1209588 1209589, overlap 1209577 1209589 GGTGAAATAATCCGT GA-GCGGGGGCG AAA TGCCCCCGTGTC TTTTTTCACAGGGGG TERM 1702 1209577 - 1209595 + GF 100 -13.8 -3.66166 | opp_overlap 1209588 1209589, overlap 1209574 1209589 GAAATAATCCGTGAG CGGGGGCG AAA TGCCCCCG TGTCTTTTTTCACAG ECS88_1198 1209572 - 1209994 + | conserved hypothetical protein from phage origin ECS88_1199 1209951 - 1210340 + | Tail attachment protein (Minor capsid protein FII) ECS88_1200 1210286 - 1210930 + | Minor tail protein Z (GpZ) TERM 1703 1210980 - 1211014 + G 100 -10.7 -4.72272 | gap 1, opp_overlap 1210982, overlap 1210983 ACTGGAGAAGCATGA CACCGGGGCGACGCTT TTTG ATG-GTCGCCCCGCTG TTTTTGATGAGGAAG TERM 1704 1210983 - 1211011 + G 72 -11 -2.98472 | gap 1, opp_overlap 1210982, overlap 1210980 GGAGAAGCATGACAC CGGGGCGACGCTT TTTG ATG-GTCGCCCCG CTGTTTTTGATGAGG TERM 1705 1211036 - 1211047 + G 70 -7.2 -4.03234 | ATGAGGAAGATTTTC CGGC AATT GCCG TTTATCTCACCAGCG ECS88_1201 1210927 - 1211322 + | Minor tail protein U TERM 1706 1211979 - 1211942 - g 79 -2.6 -5.18371 | opp_overlap 1211971, overlap 1211943 1211944 GCGGATAAAACAAAA GCCACCGTGTCGGTCA GTGGTA TGACCATCACCGTGAA CGGCGTTGCTGCAGG ECS88_1202 1211300 - 1212070 + | Major tail protein V TERM 1707 1212120 - 1212134 + G 81 -10 -3.91144 | opp_overlap 1212118 1212115 1212119 CATTTGAACATAACG GCGTGA CCG TCACGC TTTCTGAACTGTCAG ECS88_1203 1212086 - 1212508 + | Minor tail protein G TERM 1708 1212654 - 1212681 + G 90 -9.2 -4.58395 | gap 1 GGATATGCACTTTTC CGGGCTGACGTAC ACC GTGC-TCAGCCTG TTTTTCAGCGATCCG ECS88_1204 1212490 - 1212924 + | Minor tail protein T TERM 1709 1213060 - 1213035 - g 91 -5.3 -5.44119 | overlap 1213054 GTGATGCGAAAAAAA CAGCGGCAGTC GTTG AACAGTCGCTG AGCCGACAGGCGCTG TERM 1710 1214290 - 1214275 - g 81 -6.8 -4.60041 | AGCGACGCTGAAAAA GCCGAA ACAG TCCGGC GTGAAGGTGTCTGCG ECS88_1205 1212917 - 1215478 + | Minor tail protein precursor H TERM 1711 1215496 - 1215482 - g 72 -6.4 -4.30576 | GGTGGACGATGAAAA CCTTCC GCT GGAAAG TGAAACCCGGGATGG ECS88_1206 1215475 - 1215804 + | Minor tail protein M TERM 1712 1215953 - 1215939 - g 80 -5.7 -4.94972 | GAGCAGAACGAAAAA GGTGA GCCGG TCACC TGGCAGGGGCGACAG TERM 1713 1216115 - 1216135 + G 90 -9.7 -4.42653 | overlap 1216117 CGGCGGAACGGTGGT CAGGCGTAA GGT TTACGCCCG TTTTCTGGATGCGGT ECS88_1207 1215804 - 1216502 + | Minor tail protein L TERM 1714 1216534 - 1216518 - gf 71 -9.5 -3.02649 | overlap 1216520 ATCCCATGACAGAGA CAGAATC AGC GATTCTG GCGCATGCCCGGCGA TERM 1715 1217012 - 1217044 + GF 81 -9.7 -3.96298 | CAGGTGCCGTTGTCA GCGGCGCAGCCGGGC GAT GTGCTGCTGTGCTGC TTTGGTTCATCGGTG ECS88_1208 1216508 - 1217251 + | putative tail fiber component K of prophage TERM 1716 1217737 - 1217752 + GF 73 -10.4 -3.00946 | opp_overlap 1217736 1217735, overlap 1217734 CTGTACGGTGAAATG CGCGTG GGGT CACGCG TGGTTTCTCAGGAGA ECS88_1209 1217149 - 1217820 + | Tail assembly protein I TERM 1717 1217837 - 1217860 + F 81 -11.8 -3.01125 | opp_overlap 1217842, overlap 1217842 GCAAAATGTTTTATG TGAAACCGCC TCCG GGCGGTTTTA TCGTTTATGGAGCAT TERM 1718 1217855 - 1217842 - f 77 -9.5 -3.60098 | opp_overlap 1217837 1217842 ATGTTTTATGTGAAA CCGCC TCCG GGCGG TTTTATCGTTTATGG TERM 1719 1217842 - 1217855 + F 91 -9.5 -4.64846 | opp_overlap 1217842, overlap 1217837 ATGTTTTATGTGAAA CCGCC TCCG GGCGG TTTTATCGTTTATGG TERM 1720 1218031 - 1218011 - g 90 -7.5 -4.7497 | TGGATGGATTAAAAA GCGTGCTGC TGA ACAGTACGC CGGTGCTGGACAGTG TERM 1721 1220077 - 1220089 + G 78 -9.1 -3.96148 | opp_overlap 1220069 CAGATAACCGCCACG CCGCA TCT TGCGG TTTATGATCCGACGG TERM 1722 1220487 - 1220476 - g 74 -5.8 -4.45068 | ACCGTCAATAAGAAA CTGG AAGA CCAG AGTGCAGCGATCCAG ECS88_1210 1217881 - 1221363 + | Host specificity protein J of prophage TERM 1723 1221383 - 1221400 + F 100 -12.7 -5.72622 | opp_overlap 1221373 1221381 TATAACCCAGATACG GGCGCCA GAAA TGGCGCC TTTTTTATTTGTGGA TERM 1724 1221562 - 1221547 - g 72 -6.1 -4.36914 | GGTGGCCTCAGAAAA TCCGG ATGAAG CCGGA CGTTACAGCATGGAT TERM 1725 1222059 - 1222043 - g 74 -5.8 -4.46212 | gap 1, overlap 1222044 1222045 GTCGCCACCACAAAA GC-GCGG GAGG CCGCAGC AGACGCAACAAAGGC ECS88_1211 1221416 - 1223482 + | putative side tail fiber protein homolog from lambdoid prophage ECS88_1212 1223479 - 1223757 + | conserved hypothetical protein from phage origin ECS88_1213 1223770 - 1224063 + | hypothetical protein sitD 1225012 - 1224155 - | iron transport protein, inner membrane component TERM 1726 1224184 - 1224194 + g 81 -6.8 -4.68424 | ACAGATCCTGTGTAT GGGA GTT TCCC TTTTTGCGTGCGTTG sitC 1225866 - 1225009 - | iron transport protein, inner membrane component TERM 1727 1225072 - 1225059 - G 74 -8.1 -4.10161 | GACGATTTGCCAAAA GCCCA TGGG TGGGC GCAAAGACAAATGCT sitB 1226690 - 1225863 - | iron transport protein, ATP-binding component sitA 1227604 - 1226690 - | iron transport protein, periplasmic-binding protein TERM 1728 1227640 - 1227655 + H 77 -7.6 -4.36914 | opp_overlap 1227640 CAAAATTAGAACAAA CATAGC AACG GCTATG TTTTATAGCACAACC TERM 1729 1227655 - 1227640 - H 80 -7.6 -4.4522 | opp_overlap 1227640 CAAAATTAGAACAAA CATAGC AACG GCTATG TTTTATAGCACAACC ECS88_1218 1228291 - 1229061 + | hypothetical protein TERM 1730 1229326 - 1229303 - g 93 -13.2 -3.65314 | AACTGAGACACATAA GGCCTCGCAA TGGC TTGCAAGGCC ACACATGTATTGAGA ECS88_1219 1229184 - 1229339 + | hypothetical protein TERM 1731 1229493 - 1229472 - T 74 -3.9 -4.96657 | ACAAAGACAAGAAAA TAATATTTA TGAT TAAATATCA GCGAGTTGAATACAT TERM 1732 1229708 - 1229732 + T 93 -10 -4.90455 | opp_overlap 1229711, overlap 1229711 ATGTGTTAAATATTG AAACGGGCGT ATAAC ACGCCCGTTG TTTTTATAAATATGT TERM 1733 1229711 - 1229729 + T 100 -11.7 -4.5448 | opp_overlap 1229711, overlap 1229708 TGTTAAATATTGAAA CGGGCGT ATAAC ACGCCCG TTGTTTTTATAAATA TERM 1734 1229729 - 1229711 - T 100 -12.4 -3.81137 | opp_overlap 1229711 1229708 TGTTAAATATTGAAA CGGGCGTA TAA CACGCCCG TTGTTTTTATAAATA ycgX 1230351 - 1229947 - | hypothetical protein TERM 1735 1230006 - 1230018 + g 70 -5.5 -4.3953 | GCGTATTATCAATGG CGTAG TAA CTGCG TTTGTTATGATTAAC ycgE 1231303 - 1230572 - | putative DNA-binding transcriptional regulator ECS88_1223 1231365 - 1231213 - | hypothetical protein TERM 1736 1231389 - 1231354 - GR 75 -9.3 -3.70109 | TACACGACCCAATAA TACTTTGTACAATAT ATGCTA AAATTGTACAAAGTA TAAATAAGATTTCAG ycgF 1232719 - 1231508 - | putative cyclic-di-GMP phosphodiesterase; blue-light sensing protein using FAD (BLUF) ycgZ 1233033 - 1233269 + | hypothetical protein ymgA 1233312 - 1233584 + | hypothetical protein ymgB 1233613 - 1233879 + | hypothetical protein ymgC 1233992 - 1234240 + | hypothetical protein TERM 1737 1234686 - 1234698 + F 71 -4.8 -4.57837 | GGGCTATAAATAATG GGGA GATCG TCCC TTTTTACCAACCTGT TERM 1738 1235675 - 1235659 - g 81 -9.4 -4.13945 | ATCCTTATTGCAAAA CCCAGC ACCGG GCTGGG AGAAGTGCTTGTGAC ymgF 1235563 - 1235781 + | hypothetical protein TERM 1739 1236335 - 1236322 - g 70 -3.9 -4.58698 | TGAAATCAAAAATAA TACTT CTAC AAGTA ATGGGGAGTATCTAA ECS88_1231 1236179 - 1236358 + | hypothetical protein; putative exported protein ECS88_1232 1236648 - 1237025 + | hypothetical protein ECS88_1233 1237171 - 1237698 + | hypothetical protein TERM 1740 1237741 - 1237719 - T 100 -14.9 -5.1101 | CCATTAGCTAAAAAA CCGCGTCGA ATTCA TCGACGCGG TAACATATGAAATAT ymgD 1238085 - 1237756 - | hypothetical protein ymgG 1238370 - 1238095 - | hypothetical protein TERM 1741 1239374 - 1239389 + r 74 -2.4 -5.27335 | overlap 1239376 CCATCAACGATTAAA CTGCGT TTCG GCGCTG TTTTTGTTTACCGGG TERM 1742 1239706 - 1239679 - R 100 -15 -4.76041 | overlap 1239680 GAGAGGGATGAAAAA CTCAAGGCAGAG ATGA CTCTGCCTTGAA GATAAATGCGCTTTT TERM 1743 1239705 - 1239680 - R 100 -16.3 -3.44902 | overlap 1239679 AGAGGGATGAAAAAC TCAAGGCAGAG ATGA CTCTGCCTTGA AGATAAATGCGCTTT minE 1239997 - 1239731 - | cell division topological specificity factor minD 1240813 - 1240001 - | membrane ATPase of the MinC-MinD-MinE system minC 1241532 - 1240837 - | cell division inhibitor TERM 1744 1241205 - 1241220 + g 74 -2.4 -5.04222 | overlap 1241207 GAGCCTGCGGTGCGG GAGCTG GACG CGGCGC TTTTTCCTTTCCTTC ycgJ 1242052 - 1242420 + | hypothetical protein TERM 1745 1242510 - 1242532 + T 75 -9.8 -3.50456 | overlap 1242507 1242511 GGGGCGTTAACGTTT ATGACGGGGA GAG TCCCCGTCGG TTGATATTTACTTAA TERM 1746 1242511 - 1242531 + T 85 -13.3 -2.6955 | overlap 1242510 1242507 GGGCGTTAACGTTTA TGACGGGGA GAG TCCCCGTCG GTTGATATTTACTTA ycgK 1242941 - 1242540 - | hypothetical protein ycgL 1243150 - 1243476 + | hypothetical protein ycgM 1243548 - 1244207 + | putative isomerase/hydrolase ycgN 1244299 - 1244745 + | hypothetical protein umuD 1245539 - 1245958 + | DNA polymerase V, subunit D umuC 1245958 - 1247226 + | DNA polymerase V, subunit C TERM 1747 1247262 - 1247245 - T 100 -12.7 -4.72986 | overlap 1247233 TAGCGGCAGGAAAAA GCGCTCC CGCA GGAGCGC CGAATGGATTAGCGA dsbB 1247801 - 1247271 - | oxidoreductase that catalyzes reoxidation of DsbA protein disulfide isomerase I TERM 1748 1247913 - 1247940 + r 79 -9.8 -3.79113 | opp_overlap 1247911 1247917, overlap 1247917 TATCGGGCGAAAAGG CAAACCGGGCAT TTAT ATGCCCGGTAAG TTGTTATCAAAGCGT TERM 1749 1247936 - 1247917 - R 100 -13.6 -3.92659 | opp_overlap 1247913 1247917, overlap 1247911 GGGCGAAAAGGCAAA CCGGGCAT TTAT ATGCCCGG TAAGTTGTTATCAAA TERM 1750 1247917 - 1247936 + r 86 -13.6 -2.68806 | opp_overlap 1247917 1247911, overlap 1247913 GGGCGAAAAGGCAAA CCGGGCAT TTAT ATGCCCGG TAAGTTGTTATCAAA nhaB 1249488 - 1247947 - | sodium:proton antiporter TERM 1751 1248430 - 1248412 - G 80 -5.3 -4.88736 | gap 1 GACTACTGAGAAAAA CACCGTCA ACAG TG-CGGTG AATGGCAGAGATTCG fadR 1249710 - 1250429 + | DNA-binding transcriptional dual regulator of fatty acid metabolism TERM 1752 1250590 - 1250564 - T 89 -10.3 -4.58395 | gap 1, opp_overlap 1250565 1250567, overlap 1250565 1250567 CGCATCCGGCAAAAA TGAGTCCTCCTC AAAC GAGGAGGACT-A TTTACAGATTTCCCA TERM 1753 1250590 - 1250565 - T 85 -11.9 -3.34716 | opp_overlap 1250565 1250567, overlap 1250564 1250567 GCATCCGGCAAAAAT GAGTCCTCCTC AAAC GAGGAGGACTA TTTACAGATTTCCCA TERM 1754 1250565 - 1250590 + T 89 -11.9 -3.63968 | opp_overlap 1250564 1250565 1250567, overlap 1250567 GCATCCGGCAAAAAT GAGTCCTCCTC AAAC GAGGAGGACTA TTTACAGATTTCCCA TERM 1755 1250567 - 1250588 + T 100 -14.5 -3.39772 | opp_overlap 1250564 1250565 1250567, overlap 1250565 ATCCGGCAAAAATGA GTCCTCCTC AAAC GAGGAGGAC TATTTACAGATTTCC TERM 1756 1250588 - 1250567 - T 95 -14.5 -3.23975 | opp_overlap 1250567 1250565, overlap 1250564 1250565 ATCCGGCAAAAATGA GTCCTCCTC AAAC GAGGAGGAC TATTTACAGATTTCC ycgB 1252124 - 1250592 - | hypothetical protein TERM 1757 1251535 - 1251547 + g 76 -4.1 -5.01732 | TGCCGGGCTTTCTCT TCTTG CAG CGAGA TTTTTTGCGGGCGTT TERM 1758 1252910 - 1252900 - g 81 -8.2 -4.36063 | ACAACAGTATGAAAA CGCG ACC CGCG ATATCGCCGTGCTGG dadA 1252454 - 1253752 + | D-amino acid dehydrogenase dadX 1253762 - 1254832 + | alanine racemase 2, PLP-binding cvrA 1256625 - 1254889 - | putative cation/proton antiporter ldcA 1257634 - 1256720 - | L,D-carboxypeptidase A emtA 1257734 - 1258345 + | lytic murein endotransglycosylase E ycgR 1259081 - 1258347 - | protein involved in flagellar function TERM 1759 1258413 - 1258471 + g 70 -10.4 -3.14257 | AATAATCCGCTGTAA TTGCCGCTCCACCGTC-GGGCTGACGTT AAGAA AACGGAAGCTCAGACGG-GGAGTGGTGA TGGTTTCATTTTTGC ymgE 1259282 - 1259536 + | putative inner membrane protein with transglycosylase-associated domain TERM 1760 1259579 - 1259548 - T 74 -9.4 -3.33583 | opp_overlap 1259549, overlap 1259549 ATAAGATTTTCATAA GGCGGATAGCGATA CAGA TGCCGCTATCCGCT TTCACATCAGAACGT TERM 1761 1259578 - 1259549 - T 84 -12.9 -2.59668 | opp_overlap 1259549, overlap 1259548 TAAGATTTTCATAAG GCGGATAGCGATA CAGA TGCCGCTATCCGC TTTCACATCAGAACG TERM 1762 1259549 - 1259578 + T 100 -12.9 -3.59979 | opp_overlap 1259549 1259548 TAAGATTTTCATAAG GCGGATAGCGATA CAGA TGCCGCTATCCGC TTTCACATCAGAACG prrA 1261577 - 1259586 - | putative outer membrane receptor, probably tonB dependent TERM 1763 1259731 - 1259750 + g 71 -2.7 -4.83615 | overlap 1259735 TCGGCTCGAATGTGG GTCACCG CAAAAC CGGCGGC TTTTTGTGAACCGTC TERM 1764 1260602 - 1260614 + g 100 -4.7 -5.93252 | opp_overlap 1260602 TGTAATCGGAATAAT GGCTG TAG CTGCC TTTTTTATTTTTCAA modD 1262436 - 1261582 - | putative pyrophosphorylase modD ECS88_1261 1263245 - 1262433 - | conserved hypothetical protein, putative SAM-dependent methyltransferase ECS88_1262 1264151 - 1263255 - | putative ABC transporter, ATP-binding protein TERM 1765 1263777 - 1263749 - GR 74 -2.4 -5.1166 | gap 2, opp_overlap 1263749, overlap 1263750 CACTAAAAGCAAAAA TGCCGTCGTGCGCC TGC GGCACCC-A-GGCA ATAGCCTGCGCGCGC ECS88_1263 1264990 - 1264010 - | putative ABC transporter permease protein TERM 1766 1264851 - 1264868 + gr 89 -8.5 -4.63218 | opp_overlap 1264850 TGCCAGAAGACAATT TGTTCCT GCAC AGGAACA TTTTCTTGACGAAGA ECS88_1264 1266054 - 1264990 - | putative ABC transporter periplasmic binding protein TERM 1767 1265891 - 1265925 + g 72 -8.7 -3.72984 | gap 1 ACGATGCGTGTAATG TTTTGGGCTTCG-GGA AGCG TCCGTGAGGCCCAGAA TTTGACTGATTGTGC TERM 1768 1266061 - 1266036 - G 72 -5.5 -4.48987 | overlap 1266037 TCCTGATAATTAAAA CCGCTATATAC TTAC ACATATAGCGA AAAAGATCATGTTTG TERM 1769 1266334 - 1266298 - R 72 -6.7 -4.24342 | TTCGTGATGAAGAAA GAGCAATGCCAAT TTTATGCACGT AATGGCATTGCTC GATATACAGTAAAGT TERM 1770 1266351 - 1266369 + r 79 -3 -5.45802 | opp_overlap 1266353, overlap 1266353 ATATACAGTAAAGTT AAGGCGTA GGT TCCGCCTC TTTTTGTTTTAGCGG TERM 1771 1266353 - 1266367 + r 70 -5.6 -4.3613 | opp_overlap 1266353, overlap 1266351 ATACAGTAAAGTTAA GGCGTA GGT TCCGCC TCTTTTTGTTTTAGC treA 1268046 - 1266349 - | periplasmic trehalase TERM 1772 1268357 - 1268326 - R 70 -9.6 -2.90078 | gap 1, opp_overlap 1268325 1268349, overlap 1268325 CAGTGCAGAGTAAAT TGCCGGATGACATCA GAA TGATGCCATCCGA-A CGGTGGTTTAACCCT dhaH 1269783 - 1268365 - | fused dihydroxyacetone-specific PTS enzymes: HPr component ; EI component TERM 1773 1269270 - 1269255 - G 74 -8.2 -4.00066 | overlap 1269258 TCGATAAGGTATAAA CCAGCC GGGA GGCCGG ACGTACATGCAGGCC dhaL 1270426 - 1269794 - | dihydroxyacetone kinase, C-terminal domain TERM 1774 1269842 - 1269898 + g 73 -9.4 -3.5774 | gap 1, opp_overlap 1269835 1269889, overlap 1269896 CATAAACATCACCGA GGTCGCGCCGG-GATCCTGGTGACC AATACTGC GTTCACCGAGATAACTGGCGCGGCC TTTGCGGGCTTGCAT dhaK 1271507 - 1270437 - | dihydroxyacetone kinase, N-terminal domain TERM 1775 1271622 - 1271642 + H 70 -9.9 -2.97934 | opp_overlap 1271622 1271621 1271624, overlap 1271624 AAAATTAGCCCAAAT TATGTTTCA TAG TGAAACATA TGCTTTAATGAATGT TERM 1776 1272616 - 1272628 + G 79 -4.7 -4.90302 | opp_overlap 1272616 ACCGATAATAGAAAC GCAGG GAA CCAGC TTTATTTTATTGCTC TERM 1777 1272982 - 1272994 + G 72 -6.9 -4.15788 | GCTGGAACTGGCGCA CGGCG GCA CGCTG TTTCTTGAAAAGATT dhaR 1271735 - 1273654 + | DNA-binding transcriptional regulator, dihydroxyacetone metabolism TERM 1778 1273652 - 1273680 + T 81 -12.6 -2.58767 | gap 1, overlap 1273647 TTTAAGCGCCGTGGA TA-GCGGGAGAGT ATGC ACTCTCCCGCGTA TGACTTGCTAATTAA ECS88_1270 1273922 - 1273692 - | conserved hypothetical protein; putative exported protein TERM 1779 1274000 - 1274026 + r 87 -13.9 -2.93073 | opp_overlap 1274000, overlap 1273989 1273997 AGCAGGCGTAAAAAA GCCATTATGTG CGACT CACATAATGGC TCGTTATTAACCGCC TERM 1780 1274026 - 1274000 - R 100 -13.9 -5.03715 | opp_overlap 1273989 1274000 1273997 AGCAGGCGTAAAAAA GCCATTATGTG CGACT CACATAATGGC TCGTTATTAACCGCC ychF 1275149 - 1274058 - | putative GTP-binding protein TERM 1781 1274614 - 1274628 + g 70 -7.1 -4.11216 | CTTAAATCCAGCGCA CGCAG CATAC CTGCG TTTTCCAGCTGGGGC TERM 1782 1274688 - 1274699 + g 72 -5.8 -4.38927 | TTTCGCGTCTTTATC GCCA CCTT TGGC TTTCTTCTGTACGCG pth 1275850 - 1275266 - | peptidyl-tRNA hydrolase TERM 1783 1275936 - 1275920 - H 74 -2.2 -5.24129 | opp_overlap 1275932, overlap 1275932 1275933 CCGCTTGACAAAAAA CTGCGT ATCAA ATGCAG ATAATGCAATTATTG ychH 1276128 - 1276406 + | conserved hypothetical protein; putative inner membrane protein TERM 1784 1276423 - 1276452 + T 78 -11.5 -2.87963 | overlap 1276423 AAATAATGCAGTTTG CTGACCAGTCAGT TTGC GCTGACTGGTCAA TCTCGTACTTATAAA ychM 1278140 - 1276461 - | putative transporter TERM 1785 1278233 - 1278246 + r 74 -9.5 -3.34894 | opp_overlap 1278233, overlap 1278231 TTACAGACAAAAAAA CCCGC CGCA GCGGG TCTTTGAGCCGGGTT TERM 1786 1278246 - 1278233 - R 100 -9.5 -5.76633 | opp_overlap 1278233 1278231 TTACAGACAAAAAAA CCCGC CGCA GCGGG TCTTTGAGCCGGGTT prsA 1279212 - 1278265 - | phosphoribosylpyrophosphate synthase TERM 1787 1279343 - 1279329 - R 78 -10 -3.62522 | CAACGTCTGGAACAA GGTGAC GTT GTCACC GAAACTCAGCTTGCC ispE 1280214 - 1279363 - | 4-diphosphocytidyl-2-C-methylerythritol kinase lolB 1280837 - 1280214 - | chaperone for lipoproteins TERM 1788 1280440 - 1280465 + g 73 -9.1 -3.5882 | CACTGGCGCAAGCTG TTGAGCGGAAT TGGC ATTCCGGTCAA TTTGCCAATCATCTC hemA 1281051 - 1282307 + | glutamyl tRNA reductase TERM 1789 1283216 - 1283204 - g 70 -6.2 -4.24002 | GCTGAAATGGCAAAA CGGC AACAG GCCG AAGCGTCTACCCGTC prfA 1282349 - 1283431 + | peptide chain release factor RF-1 TERM 1790 1284247 - 1284231 - g 72 -10.1 -3.31792 | TGACTATGGGGATAA CGAGCGC GTA ACGCTCG GCCGCTATTATCAAT prmC 1283431 - 1284264 + | N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2 ychQ 1284261 - 1284653 + | putative membrane protein; putative component of transcriptional regulator ychA 1284657 - 1285466 + | putative transcriptional regulator kdsA 1285502 - 1286356 + | 3-deoxy-D-manno-octulosonate 8-phosphate synthase TERM 1791 1286378 - 1286400 + T 100 -9.2 -5.64274 | opp_overlap 1286378 TGTTTGAAAAATAAA GTCTTAGCGT TCT GCGTTAAGAC TTTTTTTATGGGTGC TERM 1792 1286400 - 1286378 - T 80 -6.3 -4.85782 | opp_overlap 1286378 TGTTTGAAAAATAAA GTCTTAGCG TTCTG CGTTAAGAC TTTTTTTATGGGTGC TERM 1793 1286454 - 1286429 - T 100 -13.3 -5.36441 | opp_overlap 1286428 1286427 1286448 GCCGGATACAAAAAA GGCCGCAGG CTGTTACC CCTGCGGCC GGTTTCGGGCGCATA TERM 1794 1286460 - 1286495 + T 74 -7.5 -4.21768 | gap 1, overlap 1286448 CCCTGCGGCCGGTTT CGGGCG-CATATTGCC ATCAC GGCAGCCTGACGCCCG TTTTCACCTTACTTC ldrB 1286671 - 1286504 - | small toxic polypeptide TERM 1795 1286678 - 1286719 + r 91 -10.1 -4.78848 | gap 1, opp_overlap 1286677, overlap 1286641 1286640 ATGGTTCAAGATTAG CCCCCGTTCTGTTGTCAGGT TTT ACCTCTCAAC-GTGCGGGGG TTTTCTCTTTCCAGC TERM 1796 1287008 - 1286980 - R 74 -11.1 -2.67209 | CAGGAATTTATATTA TCTCCCCCGAT TTCCGTC ATCGGAGGAGA TATAACTGTCAGGCA chaA 1288117 - 1287017 - | calcium/sodium:proton antiporter TERM 1797 1288528 - 1288507 - g 72 -6.5 -4.30253 | overlap 1288510 TATAAAGATAAAGAA GATCGGCGT GATG ACGCCAGTC GCGAAGAAACAGCGC chaB 1288387 - 1288617 + | putative conserved cation transport regulator TERM 1798 1288730 - 1288718 - f 71 -4.1 -4.7871 | AATGAGCAGTAAAAA TGTCC GGA AGACA CCAAAAAGTTGTCGC chaC 1288754 - 1289470 + | regulatory protein for cation transport ychN 1289867 - 1289514 - | hypothetical protein ychP 1290193 - 1291446 + | putative adhesin/invasin narL 1292097 - 1291447 - | DNA-binding response regulator in two-component regulatory system with NarX (or NarQ) narX 1293886 - 1292090 - | sensory histidine kinase in two-component regulatory system with NarL TERM 1799 1292164 - 1292141 - G 70 -6 -4.15044 | gap 1, opp_overlap 1292141 TTTTTCGGGAATAAA GGTGACCACCA CTT CGGT-GCCACC TGATTCACGACGGCG TERM 1800 1292853 - 1292829 - G 79 -12.1 -3.04792 | TGATCATGGCTAAGA TGACGCCCCTG CGG CAGGGTCGCCA GCAAAATACCGTACT TERM 1801 1294092 - 1294074 - g 75 -5.4 -4.60487 | opp_overlap 1294050, overlap 1294076 CAGCACCGTGAAAAA TCTCATAA TTT TTATGAAA TCACTGTACTCACTA ECS88_1292 1293912 - 1294130 + | hypothetical protein TERM 1802 1294411 - 1294421 + G 81 -6.8 -4.67038 | opp_overlap 1294411 GTTGCGGTGAACTTA CCGA AAG TCGG TTTTAATTTTACGAC narK 1294225 - 1295616 + | nitrate/nitrite transporter TERM 1803 1295640 - 1295658 + F 100 -12.4 -5.64274 | ATTTGATTATCCTTT GCGCGGCA TGA TGTCGCGC TTTTTTTATGCGTCA TERM 1804 1296295 - 1296276 - g 76 -10.6 -3.32769 | opp_overlap 1296294, overlap 1296269 CTGCCAAACCATGAA CCTCGCGG CTGC CCGCGCGG TGCCAGCTACTCCTG TERM 1805 1298410 - 1298423 + G 72 -6.7 -4.1552 | ACGACATGAATACTT CGGAT ATGC ATCCG TTTATTCACCCGCTG narG 1296009 - 1299752 + | nitrate reductase 1, alpha subunit TERM 1806 1299846 - 1299832 - g 75 -5.6 -4.60041 | AGTGACCTGTAAAAA CGTCTG GAC CAGCCG TGAAGGCGTGGAATA narH 1299749 - 1301287 + | nitrate reductase 1, beta (Fe-S) subunit TERM 1807 1301400 - 1301416 + G 76 -8 -4.25848 | opp_overlap 1301400 1301395, overlap 1301406 TCTGCCAAAAGAGGA TGCCCA TGCGC TGGGCA TTTTCCTGCGCGATT narJ 1301284 - 1301994 + | molybdenum-cofactor-assembly chaperone subunit (delta subunit) of nitrate reductase 1 narI 1301994 - 1302671 + | nitrate reductase 1, gamma (cytochrome b(NR)) subunit ECS88_1298 1303953 - 1302724 - | putative transposase TERM 1808 1302776 - 1302798 + g 78 -8.4 -4.19238 | opp_overlap 1302777 1302780, overlap 1302777 CTGGTGAGGTGATTA AGAATGGTGC TTA GCACCGTTCG TTTTAAAATTAGCGG TERM 1809 1302777 - 1302797 + g 75 -11.9 -3.11222 | opp_overlap 1302777 1302780, overlap 1302776 TGGTGAGGTGATTAA GAATGGTGC TTA GCACCGTTC GTTTTAAAATTAGCG TERM 1810 1302797 - 1302777 - G 70 -9.7 -3.16564 | opp_overlap 1302777 1302776, overlap 1302780 TGGTGAGGTGATTAA GAATGGTGC TTA GCACCGTTC GTTTTAAAATTAGCG TERM 1811 1302840 - 1302807 - G 95 -12.5 -4.07568 | opp_overlap 1302818 CCGTTCGTTTTAAAA TTAGCGGGGAGTGTC GTAA GACATTCTCCGCTAA CGTCAGATACGAGAT TERM 1812 1303992 - 1304029 + r 100 -4.7 -5.93809 | gap 1 GCCTGTCTTTTTTTA CCCGCC-CATTACTGGGG ATT CCTCAGCGCTCCGGCGGG TTTTTTTTATGGGCA purU 1305558 - 1304716 - | formyltetrahydrofolate hydrolase TERM 1813 1304761 - 1304749 - G 77 -6.9 -4.44448 | ATTACCGTAAACAAA GACGC GCT GCGCC AGTACTTTGTATAGC ychJ 1306066 - 1305608 - | hypothetical protein rssA 1306140 - 1307084 + | putative esterase of the alpha-beta hydrolase superfamily rssB 1307176 - 1308189 + | response regulator of RpoS TERM 1814 1309015 - 1309003 - g 71 -3.3 -4.77757 | GTTGAAAAACCAAAA GCGGA TGT TGCGC CGTCTAATCTCGCTA galU 1308391 - 1309299 + | glucose-1-phosphate uridylyltransferase TERM 1815 1309347 - 1309326 - T 80 -10.1 -3.72576 | opp_overlap 1309326, overlap 1309303 GTGTTTTCCACGAAA CGGCGTTGA GCAA TCGACGCCG TTTTTTTATAGCTTA TERM 1816 1309326 - 1309347 + T 100 -12.3 -5.66684 | opp_overlap 1309303 1309326 GTGTTTTCCACGAAA CGGCGTTGA GCAA TCGACGCCG TTTTTTTATAGCTTA TERM 1817 1309399 - 1309415 + T 100 -13.7 -4.64766 | opp_overlap 1309399 CCGGACAATAAAAAA TCCCGCC GAT GGCGGGA TTTTTAGCATGTGCA TERM 1818 1309415 - 1309399 - T 100 -13.7 -5.55769 | opp_overlap 1309399 CCGGACAATAAAAAA TCCCGCC GAT GGCGGGA TTTTTAGCATGTGCA hns 1309856 - 1309443 - | global nucleic acid-binding transcriptional dual regulator H-NS TERM 1819 1309520 - 1309534 + g 77 -7.1 -4.55128 | CAGCTGGAGTACGGC CCTGG CCAGT CCAGG TTTTAGTTTCGCCGT tdk 1310460 - 1311077 + | thymidine kinase/deoxyuridine kinase ECS88_1307 1312409 - 1311204 - | transposase IS4 TERM 1820 1311351 - 1311380 + g 91 -9.3 -4.59109 | overlap 1311353 GCCCCAGAAGGGGTA ATGCCAGTCAGTT AAGC AACTGACTGGCTC TTTTTCGGGGCTGTG TERM 1821 1311353 - 1311378 + g 100 -16.3 -3.90762 | overlap 1311351 CCCAGAAGGGGTAAT GCCAGTCAGTT AAGC AACTGACTGGC TCTTTTTCGGGGCTG TERM 1822 1312448 - 1312411 - R 89 -14.4 -2.86164 | opp_overlap 1312417, overlap 1312417 TGCCCAATGAGCATA CAAAAATCCGGAAACG AGTGAG CGTTTCCGGATTCTTA CACAGCCACTGGATC TERM 1823 1312417 - 1312442 + r 100 -13.4 -3.61398 | opp_overlap 1312417 1312411 ATGAGCATACAAAAA TCCGGAAACG AGTGAG CGTTTCCGGA TTCTTACACAGCCAC TERM 1824 1312442 - 1312417 - R 100 -13.4 -5.01497 | opp_overlap 1312417, overlap 1312411 ATGAGCATACAAAAA TCCGGAAACG AGTGAG CGTTTCCGGA TTCTTACACAGCCAC TERM 1825 1312539 - 1312552 + r 80 -4.5 -5.28826 | opp_overlap 1312539 AGCGCTACTGATTAA GCGGA TTTT TTCGC TTTTTTCTCAGCTTT adhE 1315210 - 1312535 - | fused acetaldehyde-CoA dehydrogenase ; iron-dependent alcohol dehydrogenase ; pyruvate-formate lyase deactivase TERM 1826 1312569 - 1312579 + g 78 -8.2 -4.22554 | overlap 1312572 TTTTTCTCAGCTTTA GCCG GAG CGGC TTCTTTCTTCGCTGC TERM 1827 1315381 - 1315359 - H 71 -7.8 -3.71687 | CTAAAAGAGTTTAAA CATTAGAGTT ATT ATCTCTAATG CGTCACTTCCAGGTG ychE 1315687 - 1316334 + | conserved hypothetical protein; putative inner membrane protein TERM 1828 1316351 - 1316368 + T 76 -8.4 -3.98113 | opp_overlap 1316336 1316351 TCCTTTCAAATGAAA CGGAGC TGCCAT GCTCCG TTTACTTCGTCATTA TERM 1829 1316368 - 1316351 - T 78 -8.4 -4.05788 | opp_overlap 1316351, overlap 1316336 TCCTTTCAAATGAAA CGGAGC TGCCAT GCTCCG TTTACTTCGTCATTA ECS88_1310 1316806 - 1316492 - | hypothetical protein TERM 1830 1316894 - 1316872 - H 74 -7.8 -4.08557 | GTCGCGAAAGAATAA TGTGTCTC GACAGGG GAGACACA GTACGAATCGACATA oppA 1317072 - 1318703 + | oligopeptide transporter subunit ; periplasmic-binding component of ABC superfamily TERM 1831 1318706 - 1318746 + F 80 -7 -4.87786 | gap 2, opp_overlap 1318712, overlap 1318707 1318710 1318711 TGTGAAGCACTAATG GCA-ATAC-GTGGGGCAGGA GTG TCCTGCTCCACGGTGTCTGA TTTTTATCGCATTAC TERM 1832 1318707 - 1318745 + F 77 -10.5 -3.51948 | gap 2, opp_overlap 1318712, overlap 1318706 1318710 1318711 GTGAAGCACTAATGG CA-ATAC-GTGGGGCAGGA GTG TCCTGCTCCACGGTGTCTG ATTTTTATCGCATTA TERM 1833 1318710 - 1318741 + F 86 -12.4 -3.22077 | gap 1, opp_overlap 1318712, overlap 1318707 1318706 1318711 AAGCACTAATGGCAA TAC-GTGGGGCAGGA GTG TCCTGCTCCACGGTG TCTGATTTTTATCGC TERM 1834 1318711 - 1318739 + F 100 -15.3 -3.16187 | opp_overlap 1318712, overlap 1318710 1318707 1318706 AGCACTAATGGCAAT ACGTGGGGCAGGA GTG TCCTGCTCCACGG TGTCTGATTTTTATC TERM 1835 1318738 - 1318712 - f 100 -16.6 -3.10464 | opp_overlap 1318711 1318710 1318707 1318706 GCACTAATGGCAATA CGTGGGGCAGGA GTG TCCTGCTCCACG GTGTCTGATTTTTAT TERM 1836 1319198 - 1319216 + G 70 -4.4 -4.5442 | opp_overlap 1319198, overlap 1319183 1319200 TGGGGCTGGCAATGA CCGGGGTT GTT ATCCCCAG TTTTGTGGTTGCGCC TERM 1837 1319630 - 1319647 + G 74 -2.7 -4.93877 | overlap 1319637 TAAGTCTGACCATTC TGGTTGG CGCG TTAACCA TTTTGTTTAATGCCA oppB 1318789 - 1319709 + | oligopeptide transporter subunit ; membrane component of ABC superfamily TERM 1838 1319756 - 1319744 - g 100 -9.1 -5.1963 | GTTAAGTAAGAAAAA CAGCG AGA CGCTG GAAAATTTCAGTGAA oppC 1319724 - 1320632 + | oligopeptide transporter subunit ; membrane component of ABC superfamily oppD 1320644 - 1321657 + | oligopeptide transporter subunit ; ATP-binding component of ABC superfamily TERM 1839 1322510 - 1322492 - g 93 -8.8 -4.95547 | TGGAGAAGAACAAAA CCATCCAG TTA CTGGAAGG GGAATTACCGTCGCC oppF 1321654 - 1322658 + | oligopeptide transporter subunit ; ATP-binding component of ABC superfamily TERM 1840 1322693 - 1322661 - T 82 -10 -4.08216 | gap 1, opp_overlap 1322668, overlap 1322668 CGATCCGCTTTAAAA GCAATAAGGGCTGAC AGTT GTCAGCCCTTTTT-C ACGCCAAAAGCGATT TERM 1841 1322687 - 1322668 - T 100 -13.6 -3.965 | opp_overlap 1322668, overlap 1322661 CTTTAAAAGCAATAA GGGCTGAC AGTT GTCAGCCC TTTTTCACGCCAAAA TERM 1842 1322668 - 1322687 + T 100 -13.6 -4.56597 | opp_overlap 1322668 1322661 CTTTAAAAGCAATAA GGGCTGAC AGTT GTCAGCCC TTTTTCACGCCAAAA yciU 1323040 - 1322711 - | hypothetical protein cls 1324535 - 1323075 - | cardiolipin synthase 1 TERM 1843 1323116 - 1323104 - G 78 -9.1 -3.88577 | overlap 1323102 TGAAGAAGTAAAACA GTCGC TCG GCGAC ACGTTGCCATAATGG TERM 1844 1323742 - 1323713 - G 78 -8.5 -4.2461 | opp_overlap 1323715, overlap 1323716 1323717 AGTCGCAGGAATAAA TAATCCCCATCGC GGTG GCGATGGGGCCTT CCATACGCGCCATCA TERM 1845 1323739 - 1323716 - G 95 -12.4 -4.24413 | opp_overlap 1323715, overlap 1323713 1323717 CGCAGGAATAAATAA TCCCCATCGC GGTG GCGATGGGGC CTTCCATACGCGCCA TERM 1846 1323738 - 1323717 - G 100 -15.9 -3.13925 | opp_overlap 1323715, overlap 1323716 1323713 GCAGGAATAAATAAT CCCCATCGC GGTG GCGATGGGG CCTTCCATACGCGCC TERM 1847 1324002 - 1323979 - G 74 -3 -5.00616 | overlap 1323983 GGGCTGCGGAAAAAA GCCACACTCC CGGC GGAGTCGAGC ATCAATCGGCAATGA ECS88_1318 1324567 - 1324851 + | hypothetical protein TERM 1848 1324882 - 1324853 - T 75 -8.7 -3.79071 | gap 1, opp_overlap 1324849 1324848 1324853 1324854 1324857, overlap 1324854 1324857 TCTACAATATCTAAA TGTACTGGGCACCA TTG CGGTGCCCAATA-A GTTTACTCTTCCGTC TERM 1849 1324882 - 1324854 - T 72 -10.3 -2.86961 | opp_overlap 1324853 1324849 1324848 1324854 1324857, overlap 1324853 1324857 CTACAATATCTAAAT GTACTGGGCACCA TTG CGGTGCCCAATAA GTTTACTCTTCCGTC TERM 1850 1324879 - 1324857 - T 79 -12 -2.67958 | opp_overlap 1324854 1324853 1324849 1324848 1324857, overlap 1324853 1324854 CAATATCTAAATGTA CTGGGCACCA TTG CGGTGCCCAA TAAGTTTACTCTTCC kch 1326159 - 1324906 - | voltage-gated potassium channel TERM 1851 1326442 - 1326412 - R 77 -9.1 -3.74178 | opp_overlap 1326415, overlap 1326418 TAAGGAAAGGCCAAA CAAGAACACGGTT GCAAA AACCGTGCCCTTA AATATTGAATTTCTA TERM 1852 1326436 - 1326418 - R 80 -8.9 -4.1023 | opp_overlap 1326415, overlap 1326412 AAGGCCAAACAAGAA CACGGTT GCAAA AACCGTG CCCTTAAATATTGAA yciI 1326755 - 1326459 - | putative enzyme TERM 1853 1327609 - 1327599 - g 81 -6.8 -4.62069 | GCGTGAGGTGAAAAA TGCG ATG CGCA GATGGCGTTATGAGC tonB 1326979 - 1327695 + | membrane spanning protein in TonB-ExbB-ExbD complex TERM 1854 1327732 - 1327703 - T 100 -13.7 -4.08144 | opp_overlap 1327704 1327710, overlap 1327704 1327710 TTCAGTAAGCATAAA GTCAAAAGCCTCC GACC GGAGGCTTTTGAT TATTACTCAACGGGT TERM 1855 1327731 - 1327704 - T 100 -17.2 -3.04404 | opp_overlap 1327704 1327710, overlap 1327703 1327710 TCAGTAAGCATAAAG TCAAAAGCCTCC GACC GGAGGCTTTTGA TTATTACTCAACGGG TERM 1856 1327704 - 1327731 + T 100 -17.2 -3.71848 | opp_overlap 1327704 1327703 1327710, overlap 1327710 TCAGTAAGCATAAAG TCAAAAGCCTCC GACC GGAGGCTTTTGA TTATTACTCAACGGG TERM 1857 1327725 - 1327710 - T 87 -10.4 -4.40173 | opp_overlap 1327704 1327710, overlap 1327704 1327703 AGCATAAAGTCAAAA GCCTCC GACC GGAGGC TTTTGATTATTACTC TERM 1858 1327710 - 1327725 + T 89 -10.4 -4.5774 | opp_overlap 1327710 1327704 1327703, overlap 1327704 AGCATAAAGTCAAAA GCCTCC GACC GGAGGC TTTTGATTATTACTC yciA 1328133 - 1327735 - | putative hydrolase TERM 1859 1328186 - 1328152 - R 88 -10.8 -4.22948 | overlap 1328158 AAAACCGACTTAAAA GGAAAATCACAGGCGC GAT GCTACTATGATTTTCC TGAGGAGAACAGAGG yciB 1328778 - 1328239 - | putative intracellular septation protein involved in cell division TERM 1860 1328469 - 1328485 + g 72 -4.3 -4.7254 | overlap 1328470 GTTCTTTACCCAGCA TCCGCTG AAT TAGCGGC TTTTTCATCACCCAT yciC 1329551 - 1328808 - | conserved hypothetical protein; putative inner membrane protein ompW 1329907 - 1330545 + | outer membrane protein W TERM 1861 1330602 - 1330584 - T 93 -11.8 -4.08064 | opp_overlap 1330584 AACCCCTCTGCAAAA CTGGTCAT CAA ATGACCAG TTTTTTCCATTCCTT TERM 1862 1330584 - 1330602 + T 100 -11.8 -5.1848 | opp_overlap 1330584 AACCCCTCTGCAAAA CTGGTCAT CAA ATGACCAG TTTTTTCCATTCCTT ECS88_1327 1331721 - 1330591 - | phage integrase TERM 1863 1330963 - 1330973 + g 79 -2.4 -5.27779 | CAGAGGGATGGCAAT CCGG GTT CCTG TTTTTTGCTGTTCGA TERM 1864 1331032 - 1331020 - G 70 -6.3 -4.16943 | opp_overlap 1331019 CCGGATATCCGAAAA TTGCA TTT TGCAA ATATCTGAAAGGCGC TERM 1865 1331158 - 1331169 + g 95 -7.2 -5.43866 | TCGCTGTCTTGATAT CCGC ACCT GCGG TTTTTTTGCCGATTC TERM 1866 1331685 - 1331696 + g 76 -3.6 -4.89567 | opp_overlap 1331674 AATACGGAGATAATC CCGG AACA TCGG TTTTATATTTTCGCG ECS88_1328 1331947 - 1331699 - | phage excisionase TERM 1867 1332024 - 1332038 + r 71 -5 -4.58395 | ACATTAAAAATCAGC CTGATT TGG GATCAG TTTTTGCCAGATAGC ECS88_1329 1334483 - 1332012 - | putative exonuclease from phage origin TERM 1868 1332200 - 1332217 + g 76 -12.7 -2.55351 | opp_overlap 1332193, overlap 1332199 TGTAGTAACGCCACG GGCAGGG GATC CCCTGCC GTTCGTATGAACGGC TERM 1869 1332814 - 1332836 + g 77 -6.3 -4.67904 | gap 1 CAGTTGCCGCCGCCG GTCTG-ACCG CAGG CGGTGCAGGC TTTTTCCACTTCCTG TERM 1870 1333269 - 1333280 + g 71 -2.2 -4.89339 | ACCAGAAAGTTTGTT TGCG CGAC CGTA TTTTTCTCCGTCCTT ydfD 1334767 - 1334576 - | conserved hypothetical protein; Qin prophage ECS88_1331 1335057 - 1334764 - | putative regulator of cell division encoded by prophage ECS88_1332 1335302 - 1335517 + | hypothetical protein ydfC 1335739 - 1335518 - | conserved hypothetical protein; Qin prophage ydfB 1335897 - 1335769 - | conserved hypothetical protein; Qin prophage TERM 1871 1335846 - 1335871 + g 76 -7.5 -4.24963 | CTTCGCCTTCGGCAA GGCCTTCGAAG TATT CTTCGTAAGCC TTTTCCATGATTGTG ydfA 1336135 - 1335899 - | conserved hypothetical protein from phage origin TERM 1872 1336256 - 1336246 - R 71 -4 -4.87786 | TTAAGTTTAGAAAAA TGAA CTT TTCA GGTCAATGTTTTTTT ECS88_1336 1336985 - 1336347 - | putative repressor protein from phage origin TERM 1873 1337166 - 1337150 - gH 70 -3.7 -4.67904 | TAGGAACGTCAAAAA CCACA GTCAGCA TGTGG GGGGAAGAGGTTCCG ECS88_1337 1337029 - 1337319 + | conserved hypothetical protein from phage origin ECS88_1338 1337231 - 1337728 + | conserved hypothetical protein from phage origin TERM 1874 1338318 - 1338279 - g 70 -4.3 -4.49937 | gap 1, overlap 1338281 1338284 TCAAGAAGATCAAAA CACTATGGTCCATGGCGT AAAAA ACGCCACGAACCAG-GCA GGGGATGTTCAGACC TERM 1875 1338314 - 1338284 - g 86 -14.1 -2.97995 | overlap 1338281 1338279 AAGATCAAAACACTA TGGTCCATGGCGT AAAAA ACGCCACGAACCA GGCAGGGGATGTTCA ECS88_1339 1337794 - 1338870 + | conserved hypothetical protein from phage origin ECS88_1340 1338911 - 1339333 + | conserved hypothetical protein from phage origin TERM 1876 1339401 - 1339426 + G 77 -11.3 -3.19642 | gap 1, overlap 1339396 TAGAGCTAGCGTGGT TGTCCGCT-TTG TGC CAATAGCGGACA TTGCTGGCTCATGGT ECS88_1341 1339375 - 1340487 + | Conserved Hypothetical protein from phage origin ECS88_1342 1340503 - 1341504 + | conserved hypothetical protein from phage origin ECS88_1343 1341616 - 1341906 + | hypothetical protein TERM 1877 1342057 - 1342007 - f 100 -14.3 -4.64844 | gap 1, opp_overlap 1342018 GGCAGATAGAGAAAA GCCCCAG-TTAATATTACGCGTCC TGCA AGACGCTTAACATTAATCTGAGGC TCAATCTATGAACGG TERM 1878 1342151 - 1342136 - f 85 -9 -4.36411 | TATGAAGCAGCAAAA GGCGAT GTTA ATCGCC CTGATCGTCATCTGT TERM 1879 1342311 - 1342280 - f 78 -10.8 -3.17229 | opp_overlap 1342280 1342282, overlap 1342278 ACCTGAGGAGTAAGA GACCCGGCGAGGGA GAAA TCCCTCGCCACCTC TGATGTGTCAGGCAT TERM 1880 1342348 - 1342361 + F 100 -9.5 -5.45813 | opp_overlap 1342348 CGCACCCGCACGTAA CCCGC TTCG GCGGG TTTTGTTTTTTCCTG TERM 1881 1342361 - 1342348 - f 71 -9.5 -3.06183 | opp_overlap 1342348 CGCACCCGCACGTAA CCCGC TTCG GCGGG TTTTGTTTTTTCCTG ydfU 1342725 - 1343771 + | conserved hypothetical protein; Qin prophage ECS88_1346 1343777 - 1343977 + | hypothetical protein ECS88_1347 1343784 - 1344158 + | putative crossover junction endodeoxyribonuclease rusA (Holliday junction nuclease rusA) (Holliday juction resolvase) (Gp67) ECS88_1348 1344155 - 1344976 + | putative antitermination protein Q of prophage TERM 1882 1345010 - 1345048 + F 74 -3.8 -5.00616 | overlap 1345012 1345012 AATCTGTGGTAAATT TGCTCTAACGATGGGCGT TTT ATGCCTGACGTTAGAAGA TTTTTTACACCCCGC TERM 1883 1345059 - 1345074 + F 100 -11.8 -5.28176 | GAAGATTTTTTACAC CCCGCC GCCT GGCGGG TTTTTTATGACTGAA ECS88_1349 1345201 - 1345398 + | conserved hypothetical protein from phage origin TERM 1884 1345385 - 1345402 + F 100 -7 -5.73978 | opp_overlap 1345384 TCGGTTGTTACAGAC GCCTTC CGCAGT GAAGGC TTTTTTATTTGTGGT TERM 1885 1345461 - 1345421 - f 73 -8.9 -3.53811 | opp_overlap 1345425, overlap 1345422 TTTATTTGTGGTAAA TGGGCGGCTGGTGGGTG TTAGGGG CACCCACCAGCCATCTG CTCATGCGTCCGGAT TERM 1886 1345460 - 1345422 - f 82 -12.4 -2.72144 | opp_overlap 1345425, overlap 1345421 TTATTTGTGGTAAAT GGGCGGCTGGTGGGTG TTAGGGG CACCCACCAGCCATCT GCTCATGCGTCCGGA TERM 1887 1345425 - 1345457 + F 100 -16.3 -2.83164 | opp_overlap 1345422 1345421 TTTGTGGTAAATGGG CGGCTGGTGGGTGTT AGG GGCACCCACCAGCCA TCTGCTCATGCGTCC TERM 1888 1346460 - 1346471 + G 74 -2.2 -5.15634 | TAGCCGTCCTGGTGA TCTG GTTG CGGA TTTTTTCATGGGGTC ECS88_1350 1345549 - 1346598 + | putative DNA adenine methyltransferase ( DNA methylase) from phage origin TERM 1889 1346913 - 1346928 + F 100 -8.2 -5.83822 | CACTTATTTTCCCTG GCTCGC TTTT GCGGGC TTTTTTTTAAATGTC TERM 1890 1347134 - 1347151 + F 100 -12.7 -4.52857 | TAGCGCCACTCTCCA GCCCCTC TCCG GAGGGGC TTTTCTGTGCCGGAT TERM 1891 1347250 - 1347237 - f 71 -8.1 -3.75665 | TCAGATGTGATGAAA GCCTG TCAG CAGGC AGGGCGTATCGGAAA TERM 1892 1347347 - 1347368 + F 100 -12.3 -4.72272 | gap 1, overlap 1347360 ACCGCTATCCTTCCA GGCCCATCCG CTC CGG-TGGGCC TTTTTACTGCAGAAA TERM 1893 1347622 - 1347637 + F 91 -10.4 -4.77165 | GATACGCGGCTTTAG CCCCTC TCCG GAGGGG TTTTCTTGTGGGCAA TERM 1894 1347679 - 1347658 - f 100 -12.3 -5.40072 | gap 1 TTGTGGGCAAAAAAA GCCCGCG-CT GGG AGACGCGGGC GGCAAGGAATAAACA TERM 1895 1347748 - 1347763 + F 72 -8.2 -3.94933 | CCCATAGTAATCACT CTGCGC AACT GCGCGG TCTTTTTCGAATTGC TERM 1896 1348305 - 1348327 + G 100 -9.9 -5.77677 | opp_overlap 1348305 GCATGAGTTATCAGA GCCATCAGT AGTTA ACTGGTGGC TTTTTTATTGTTTTC ECS88_1353 1348264 - 1348584 + | Lysis protein S homolog from lambdoid prophage ECS88_1355 1349171 - 1348899 - | conserved hypothetical protein from phage origin TERM 1897 1349901 - 1349935 + H 81 -10.8 -3.46647 | opp_overlap 1349906, overlap 1349906 TAAGTGAATAAAAGT AAAAACCCCGTTTGTT GGC ACCAAGCGGGGTTTTG TGTTTCCTGACTCCG TERM 1898 1349906 - 1349930 + H 95 -10.7 -4.82128 | opp_overlap 1349906, overlap 1349901 GAATAAAAGTAAAAA CCCCGTTTGTT GGC ACCAAGCGGGG TTTTGTGTTTCCTGA TERM 1899 1349930 - 1349906 - H 95 -8.5 -5.17786 | opp_overlap 1349906 1349901 GAATAAAAGTAAAAA CCCCGTTTGTT GGC ACCAAGCGGGG TTTTGTGTTTCCTGA ECS88_1358 1349935 - 1350108 + | conserved hypothetical protein from phage origin rzpD 1350110 - 1350574 + | putative murein endopeptidase; DLP12 prophage ECS88_1361 1350836 - 1350738 - | hypothetical protein TERM 1900 1350808 - 1350797 - G 71 -2.2 -4.99435 | overlap 1350800 GGGAATAATCAAAAA CGAT GCAC ACCG GGGTTACCGGGTACA ECS88_1362 1351307 - 1350882 - | conserved hypothetical protein from phage origin TERM 1901 1350945 - 1350958 + g 83 -5.3 -5.13722 | opp_overlap 1350945 TAATGAATTATCAAA GGTAT AGTA ATACC TTTTGTTTTCGTGGA ynfO 1351583 - 1351350 - | conserved hypothetical protein; Qin prophage TERM 1902 1351786 - 1351799 + H 71 -3.7 -4.7889 | overlap 1351785 CGACAGGTTACGGGG CGGCG ACCT CGCGG TTTTTCACTATTTAT TERM 1903 1351891 - 1351945 + H 100 -14.5 -3.87323 | opp_overlap 1351891 1351892, overlap 1351892 TATTGCATTCATAAA TGTCCGACATGAAAGTGTCCGAAAA TGCCT TTTTCTGGCGTTTTCATGTCGGGCC TTGTATTTGATAATG TERM 1904 1351892 - 1351944 + H 100 -18 -2.91671 | opp_overlap 1351891 1351892, overlap 1351891 ATTGCATTCATAAAT GTCCGACATGAAAGTGTCCGAAAA TGCCT TTTTCTGGCGTTTTCATGTCGGGC CTTGTATTTGATAAT TERM 1905 1352258 - 1352243 - g 72 -6.1 -4.3739 | TACCGGCTCACAAAA GCGCA GGCAGA TGCGC AGGAACTGAAAAATG ECS88_1364 1351946 - 1352518 + | Terminase small subunit (gp1) TERM 1906 1352920 - 1352935 + F 71 -4 -4.74132 | gap 1, opp_overlap 1352920 AACACCGCGATAATA CGC-TCA CCC TGAAGCG TTTTTCCTCCGGTGT TERM 1907 1353181 - 1353165 - f 71 -4.4 -4.70659 | gap 1 TGCCAGATCGAAAAA GCCG-CT AACG AGTCGGC ACATTTCATGCGTTT TERM 1908 1353243 - 1353259 + F 71 -7.9 -3.77087 | CAGTATCTGAAATTT GGCGATG ATG CCTCGCC TTTCGGTCTTAAGTG TERM 1909 1353852 - 1353834 - f 81 -2.3 -5.5112 | overlap 1353836 GCGATCAACAAAAAA TACCGCC ATGCA GACGGAA CCGAAATGACCATTT TERM 1910 1354016 - 1354002 - f 89 -8.5 -4.63527 | TCACCATGCCAAAAA CCCGC AATCA GCGGG GCGTGTATCTGTGCG TERM 1911 1354124 - 1354142 + F 74 -3.8 -5.00616 | overlap 1354126 TCGTATGCCATCCGT TTTCCTGA TGA TCCGGAGA TTTTTTCGCAGACAG ECS88_1367 1354401 - 1354607 + | Head stabilization protein (Head protein GP3) TERM 1912 1356117 - 1356098 - g 72 -4.9 -4.61231 | overlap 1356099 GCAGAGCGGGAAAAA GCCGGAC TCTCAC GTCCGGT GTGGATAGCGCAGGC ECS88_1368 1354604 - 1356196 + | Portal protein (Head protein GP4) TERM 1913 1356246 - 1356261 + G 91 -7.5 -5.07652 | CCGCTGCTTCTGGAG CCCGC CTATGC GCGGG TTTTCTTTTGCGCGC TERM 1914 1357396 - 1357377 - g 72 -5.6 -4.58663 | gap 1, overlap 1357378 1357379 ATGACGGTGGAAAAA GCCCGCCCG ATC CTGGCGG-C TGCACCACTGGCGGA TERM 1915 1357522 - 1357485 - g 72 -4.6 -4.59773 | overlap 1357470 1357487 GCGCAGGCTGAAAAA CTGGCGGCCTGCCCGG GAATGA CCGTGGAGAACGCCCG GGCTGTGCTGGCTGC ECS88_1369 1356186 - 1357691 + | Head-tail preconnector protein GP5 [Contains: Scaffold protein GP6 (Head protein GP6)] TERM 1916 1358042 - 1358027 - g 91 -7.6 -5.1244 | overlap 1358033 GGATGAACACAAAAA GGCAAA TGCC TTTGCC GGCACAGCCCTGAGT ECS88_1370 1357728 - 1358075 + | Head decoration protein (gpD) (Major capsid protein D) TERM 1917 1358285 - 1358275 - g 88 -8.2 -4.652 | opp_overlap 1358275 1358277, overlap 1358266 1358276 1358277 AAATTACCGGAAAAA CGCC GGT GGCG GCCTATGTCTCCCCG ECS88_1371 1358133 - 1359161 + | Major head protein (Head protein GP7) TERM 1918 1359167 - 1359192 + GF 100 -9.7 -5.00616 | gap 1, opp_overlap 1359181 1359182, overlap 1359170 1359182 GGTGAAATAATCCGT GA-GCGGGGGCG AAA TGCCCCCGTGTC TTTTTTCACAGGGGG TERM 1919 1359170 - 1359188 + GF 100 -13.8 -3.66166 | opp_overlap 1359181 1359182, overlap 1359167 1359182 GAAATAATCCGTGAG CGGGGGCG AAA TGCCCCCG TGTCTTTTTTCACAG ECS88_1372 1359165 - 1359587 + | putative DNA packaging protein from phage origin ECS88_1373 1359544 - 1359933 + | Tail attachment protein (Minor capsid protein FII) TERM 1920 1360017 - 1360005 - g 77 -6.9 -4.56597 | CCGGGTTCGTAAAAA CGCCA TTC CGGCG GCTTCAGCAATGGCC ECS88_1374 1359949 - 1360482 + | Minor tail protein Z (GpZ) TERM 1921 1360533 - 1360566 + G 82 -7.5 -4.56597 | gap 1, opp_overlap 1360533 1360535, overlap 1360535 CTCGAGCAGCATGAA CA-CGGGGCGAC GCTGTTTGATG GTCGCCCCGTTG TTTTTGACGAAGAGG TERM 1922 1360563 - 1360535 - g 70 -10.3 -3.18023 | opp_overlap 1360535 1360533, overlap 1360533 CGAGCAGCATGAACA CGGGGCGAC GCTGTTTGATG GTCGCCCCG TTGTTTTTGACGAAG TERM 1923 1360535 - 1360563 + G 90 -10.3 -4.40561 | opp_overlap 1360533 1360535, overlap 1360533 CGAGCAGCATGAACA CGGGGCGAC GCTGTTTGATG GTCGCCCCG TTGTTTTTGACGAAG ECS88_1375 1360479 - 1360874 + | Minor tail protein U ECS88_1376 1360882 - 1361634 + | Major tail protein V ECS88_1377 1361648 - 1362079 + | Minor tail protein G TERM 1924 1362095 - 1362130 + F 85 -13.2 -2.71364 | ACTTTGCCCTCAGAC TGGCGCGTGAGATGGG GAGA CCCGACTGGCGCGCCA TGCTTGCCGGGATGA TERM 1925 1362225 - 1362252 + G 100 -11.4 -5.44119 | gap 1 GGATATGCATTTTTC CGGGCTGACGTAC GCT GTAC-TCAGCCTG TTTTTTTGCGATCCG ECS88_1378 1362106 - 1362519 + | Minor tail protein T TERM 1926 1362685 - 1362671 - g 71 -2.7 -4.82901 | CTGGCTGCACAAAAA GCCGG GATTT CCGTC GGGCAGTATAAAGCG TERM 1927 1362899 - 1362935 + G 85 -11.6 -3.64682 | gap 2 GCGGTGGCGACAGGT GCGCTGGCGTACGCCTGG TAC CAGGGCG-ACGCCA-CGC TTTCAGAATTTAATA TERM 1928 1363527 - 1363514 - g 82 -3.1 -5.252 | GAGGCGGATAAAAAA TGGCA GTGG TACCA GAGCCGGAGCCAGCG TERM 1929 1363665 - 1363652 - g 70 -3.7 -4.70659 | TCGGATATGGAAAAA GCCGG TGAA CTGGC GGCAAGGGACAGGGC TERM 1930 1363984 - 1363973 - g 70 -4.4 -4.58663 | AGGACGCTGGAAAAA CACA GCGG TGTG AATGAGAAAATCAGC TERM 1931 1364274 - 1364249 - g 72 -6.8 -4.17023 | gap 1, overlap 1364250 GCAATCAGCGCAAAA GCCCG-CGGCC TCACC GACCGTCAGGC GCAGCGGGAGTCGGA ECS88_1379 1362500 - 1365073 + | Minor tail protein precursor H TERM 1932 1365091 - 1365077 - g 72 -6.4 -4.30576 | GGTGGACGATGAAAA CCTTCC GCT GGAAAG TGAAACCCGGGATGG ECS88_1380 1365070 - 1365339 + | Minor tail protein M TERM 1933 1365548 - 1365534 - gf 80 -5.7 -4.94972 | GAGCAGAACGAAAAA GGTGA GCCGG TCACC TGGCAGGGGAGGCAG TERM 1934 1365710 - 1365730 + GF 90 -9.7 -4.42653 | overlap 1365712 CGGCGGAACGGTGGT CCGGCGTAA GGT TTACGCCCG TTTTCTGGATGCGGT TERM 1935 1365712 - 1365728 + GF 74 -10.9 -2.54745 | overlap 1365710 GCGGAACGGTGGTCC GGCGTAA GGT TTACGCC CGTTTTCTGGATGCG ECS88_1381 1365399 - 1366097 + | Minor tail protein L TERM 1936 1366128 - 1366112 - gf 71 -9.5 -3.02649 | overlap 1366114 ATCCCATGACAGAGA CAGAATC AGC GATTCTG GCGCACGCCCGGCGA ECS88_1382 1366060 - 1366845 + | putative tail fiber component K of prophage ECS88_1383 1366743 - 1367384 + | Tail assembly protein I from putative prophage ECS88_1384 1367446 - 1367796 + | conserved hypothetical protein from phage origin TERM 1937 1367822 - 1367838 + F 100 -11.5 -4.63048 | opp_overlap 1367819 TGTCGTAACTCATGA GCCGCCT TTT GGGCGGC TTTGTTGTTTATGGA TERM 1938 1368013 - 1367993 - g 90 -7.5 -4.7497 | TGGACGGATTAAAAA GCGTGCTGC TGA ACAGTACGC CGGTGCTGGACAGTG TERM 1939 1369624 - 1369599 - g 80 -11.9 -3.30441 | GAGTATCCGTGAGAA CGATGACGGCA CGTA TGCCATCACCG CCGTGCAGCATGTAC TERM 1940 1370469 - 1370458 - g 95 -5.8 -5.45652 | ACCGTCAATAAAAAA CTGG AAGA CCAG AGTGCGGCAATCCAG TERM 1941 1370526 - 1370497 - g 70 -6.5 -4.18367 | CAGCAGATACAGAAA GTTCAGGTTGATA CAAA TAATAACCTGAAC AGCATGTGGGCCGTG ECS88_1385 1367863 - 1371342 + | Host specificity protein J TERM 1942 1371362 - 1371379 + F 100 -12.7 -5.4505 | opp_overlap 1371352 1371353 1371360 TATAACCCATATACG GGCGCCA GAAA TGGCGCC TTTTTTATTGCAGAA ECS88_1386 1371410 - 1372009 + | Putative Lom-like outer membrane protein of phage origin TERM 1943 1372116 - 1372139 + F 100 -10.2 -5.84381 | TTACACTGTCCTGAA GCCCGTGGCG TCAC TGCTGCGGGC TTTTTTTATTGGTGG TERM 1944 1372579 - 1372548 - g 79 -4.5 -5.02074 | overlap 1372551 GCAGCCGCGAAAAAA TCAGCCAGC-GATGC CAGT GCATCAGCCAGC-GA GGCGGCAACTCATGC TERM 1945 1372773 - 1372744 - g 75 -4.9 -4.76041 | gap 1, overlap 1372745 CAGAGTCATCAAAAA GCGCGGCAGCTACC AGC GCCAG-TGCCGCGA AAACGTCAGAAACGA TERM 1946 1373001 - 1372987 - g 84 -7.8 -4.59853 | CGAAGGCGGCAAAAA CGTCCG AGA CGAACG CCAGGTCTTCTGAAA TERM 1947 1373310 - 1373290 - g 72 -4.5 -4.63542 | opp_overlap 1373294, overlap 1373291 1373292 CAGAATCCTCAAAAA CGGCTGCCG CAT CGTCCGCCA GTTCGGCGGCGTCAT ECS88_1387 1372161 - 1375268 + | putative tail fiber protein TERM 1948 1375685 - 1375669 - g 100 -6.5 -5.80003 | overlap 1375672 GGAAGAAACAAAAAA CAACCTG ATG CAGGTAG CCAGTGAGCATATTG TERM 1949 1375682 - 1375672 - g 86 -6.8 -4.9072 | overlap 1375669 AGAAACAAAAAACAA CCTG ATG CAGG TAGCCAGTGAGCATA tfaQ 1375268 - 1375852 + | putative tail fibre chaperone; Qin prophage TERM 1950 1375857 - 1375909 + T 87 -7.8 -5.08824 | gap 1, overlap 1375859 1375867 TCAGGGAGTAATCAT TGGGATTATGCCGCAGCACG-TCTT AAGC AAGAACGTGCTGCGGTTGGATGCTA TTTTTTCCCTGAAGC TERM 1951 1375859 - 1375907 + T 76 -8.2 -4.17608 | gap 1, overlap 1375857 1375867 AGGGAGTAATCATTG GGATTATGCCGCAGCACG-TCTT AAGC AAGAACGTGCTGCGGTTGGATGC TATTTTTTCCCTGAA TERM 1952 1375867 - 1375899 + T 100 -17.2 -3.16564 | gap 1, overlap 1375859 1375857 ATCATTGGGATTATG CCGCAGCACG-TCTT AAGC AAGAACGTGCTGCGG TTGGATGCTATTTTT ybcY 1376491 - 1375907 - | putative AdoMet-dependent methyltransferase; DLP12 prophage ECS88_1390 1376632 - 1376901 + | Putative tail fiber assembly protein ECS88_1391 1376905 - 1377186 + | putative tail component TERM 1953 1377399 - 1377385 - T 81 -3.6 -5.46698 | TGCAAAACTAAAAAA GATTTC AAT AAAATC AGACAGTTAAAAACA TERM 1954 1377650 - 1377629 - T 100 -14.5 -4.84017 | AATTCCGCACAAAAA TGACCCCGT AATT ACGGGGTCA ATAAGGACATGGTAT yciE 1378180 - 1377674 - | hypothetical protein yciF 1378726 - 1378226 - | hypothetical protein TERM 1955 1378768 - 1378747 - R 87 -13.7 -2.94144 | opp_overlap 1378744, overlap 1378744 TCTCCAGTGAAATCA CTGCGAGCC ATAC GGCCCGCAG ATGCAATTATCTTTA TERM 1956 1378808 - 1378830 + r 76 -10 -3.32562 | overlap 1378812 ATTAATAATTAACGG TGAATCAGGA TTT TCCTGATTTA TTATCACCGCTTTGT TERM 1957 1378812 - 1378826 + r 84 -8.6 -4.30987 | overlap 1378808 ATAATTAACGGTGAA TCAGGA TTT TCCTGA TTTATTATCACCGCT yciG 1378991 - 1378812 - | hypothetical protein TERM 1958 1379365 - 1379343 - R 100 -11.2 -4.45261 | opp_overlap 1379337, overlap 1379344 TAAAGAAAGTTAAAA TGCCGCCAGC GGA ACTGGCGGCT GTGGAATTAACTGCG TERM 1959 1379364 - 1379344 - R 95 -14.7 -3.2553 | opp_overlap 1379337, overlap 1379343 AAAGAAAGTTAAAAT GCCGCCAGC GGA ACTGGCGGC TGTGGAATTAACTGC trpA 1380178 - 1379372 - | tryptophan synthase, alpha subunit trpB 1381371 - 1380178 - | tryptophan synthase, beta subunit TERM 1960 1381242 - 1381260 + g 82 -7.4 -4.58395 | opp_overlap 1381244, overlap 1381245 GCAGGTCGTTGAACT GAGCCTGA AAT TCAGGATC TTTTTGCGCGCTGAC trpC 1382741 - 1381383 - | fused indole-3-glycerolphosphate synthetase ; N-(5-phosphoribosyl)anthranilate isomerase TERM 1961 1381474 - 1381486 + g 86 -10.5 -3.89614 | opp_overlap 1381473 1381472 1381469 GAATTAAAATCAAGC CCGGC GCA GCCGG TTTGTGCCGCTTCCA trpD 1384340 - 1382745 - | fused glutamine amidotransferase (component II) of anthranilate synthase ; anthranilate phosphoribosyl transferase TERM 1962 1382875 - 1382902 + g 71 -10.6 -2.88054 | gap 1, opp_overlap 1382859, overlap 1382872 1382872 1382874 1382900 ATGGCGACATTCGCC GCGACGGCTGCTT CGT GAGCGGC-GTCGC CTTTACCTTGTAACA TERM 1963 1383212 - 1383235 + g 78 -7.4 -4.30014 | GGTTAATTAATGGCC CCAGCACATT GAAC AGTGTGCGGG TTTTCAGTTGCTGGC TERM 1964 1383414 - 1383364 - G 77 -11.9 -3.26933 | gap 1, opp_overlap 1383382 1383410, overlap 1383362 ATATCAAGATTAATA CCG-AACGCCGCCAGCAGATCCGA CGAG CCGGATTTACTGGAGACGCTACGG TTGCCGTGTTTCGCC trpE 1385902 - 1384340 - | component I of anthranilate synthase TERM 1965 1385877 - 1385887 + g 82 -3.2 -5.20783 | TTGCAGGTTAGCAGT TCGA GAG TCGG TTTTTGTGTTTGCAT TERM 1966 1385950 - 1385932 - R 100 -8.8 -5.75342 | TTTGTTCAAAAAAAA GCCCGC TCATTAG GCGGGC TGGGTATCTGATTGC trpL 1386038 - 1385994 - | trp operon leader peptide yciV 1386176 - 1387057 + | hypothetical protein yciO 1387054 - 1387674 + | hypothetical protein TERM 1967 1387811 - 1387776 - g 100 -10.6 -4.62783 | gap 1, opp_overlap 1387776 1387779 1387779, overlap 1387778 1387779 GAGTTATGCGAAAAA CACGGAGATCCCTTCTT ATG AAGAAGGGATCT-CGCT CTTTGATGTTGAAGC TERM 1968 1387776 - 1387812 + G 78 -9.5 -3.92324 | opp_overlap 1387776 1387778 1387779, overlap 1387779 1387779 GAGTTATGCGAAAAA CACGGAGATCCCTTCTT ATG AAGAAGGGATCTCGCTC TTTGATGTTGAAGCC TERM 1969 1387809 - 1387778 - g 100 -15.4 -3.92746 | gap 1, opp_overlap 1387776 1387779 1387779, overlap 1387776 1387779 GTTATGCGAAAAACA CGGAGATCCCTTCTT ATG AAGAAGGGATCT-CG CTCTTTGATGTTGAA TERM 1970 1387809 - 1387779 - g 95 -15.6 -2.95166 | opp_overlap 1387776 1387779 1387779, overlap 1387778 1387776 TTATGCGAAAAACAC GGAGATCCCTTCTT ATG AAGAAGGGATCTCG CTCTTTGATGTTGAA TERM 1971 1387779 - 1387810 + G 100 -15.4 -3.55084 | gap 1, opp_overlap 1387778 1387779 1387776, overlap 1387776 1387779 TTATGCGAAAAACAC G-GAGATCCCTTCTT ATG AAGAAGGGATCTCGC TCTTTGATGTTGAAG TERM 1972 1387779 - 1387809 + G 95 -15.6 -2.72568 | opp_overlap 1387778 1387779 1387776, overlap 1387779 1387776 TTATGCGAAAAACAC GGAGATCCCTTCTT ATG AAGAAGGGATCTCG CTCTTTGATGTTGAA yciQ 1387702 - 1389597 + | conserved hypothetical protein; putative inner membrane protein TERM 1973 1389730 - 1389754 + F 72 -8.7 -3.61398 | AGACTTTACTATCAG TGAGTCAGA TGTAAGT TCTGACTCA TTGTTGCACAAAAGC rluB 1389810 - 1390685 + | 23S rRNA pseudouridylate synthase TERM 1974 1390694 - 1390714 + T 89 -8.3 -4.62872 | opp_overlap 1390694 1390691 CGGTTAATCAAAGTA TGCCGGA CGTCATA TCCGGCA TTTTTACAGATTAGT btuR 1391315 - 1390725 - | cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferase yciK 1392070 - 1391312 - | putative oxoacyl-(acyl carrier protein) reductase ECS88_1406 1392278 - 1392114 - | hypothetical protein TERM 1975 1392410 - 1392398 - g 82 -9.1 -4.2528 | GCTCAACGTAATAAA CGCCA GCG TGGCG AGTTACGAGTCAACA sohB 1392290 - 1393339 + | putative inner membrane peptidase TERM 1976 1393367 - 1393348 - Tf 93 -10.7 -4.46775 | opp_overlap 1393348 GATGTAAAAGACAAA CGCGAGG ATAAGA CCTCGCG TTTTGCTTTAATCAA TERM 1977 1393348 - 1393367 + TF 93 -10.7 -4.58773 | opp_overlap 1393348 GATGTAAAAGACAAA CGCGAGG ATAAGA CCTCGCG TTTTGCTTTAATCAA yciN 1393626 - 1393375 - | hypothetical protein ECS88_1410 1393619 - 1393774 + | hypothetical protein ECS88_1411 1393671 - 1393883 + | hypothetical protein TERM 1978 1394154 - 1394143 - g 72 -4.4 -4.62471 | CTCAACTGCCAAAAA GAGT GCCG ACTC TACCTCCACCAAGAC TERM 1979 1394810 - 1394795 - g 74 -6 -4.56775 | AGTCTGCTGGAAAAA GCGCGC TACA GCGTGC TGGAACGTGAAGACA TERM 1980 1394927 - 1394916 - g 90 -4.4 -5.40072 | TTGGCGTGAAAAAAA CCAT GATG ATGG CTCAGCGTTTGTATG topA 1394006 - 1396603 + | DNA topoisomerase I, omega subunit TERM 1981 1396627 - 1396659 + F 80 -10.8 -3.29121 | gap 1, opp_overlap 1396635, overlap 1396635 TCTGTCTGGTTTTTA TAAACAAAGGGTCGC GAAA GCGGCCCTTT-TTTA TTGCATATTATTTTT TERM 1982 1396635 - 1396652 + F 100 -10.5 -5.49234 | opp_overlap 1396635, overlap 1396627 GTTTTTATAAACAAA GGGTCGC GAAA GCGGCCC TTTTTTATTGCATAT TERM 1983 1396652 - 1396635 - f 87 -8.3 -4.55295 | opp_overlap 1396627 1396635 GTTTTTATAAACAAA GGGTCGC GAAA GCGGCCC TTTTTTATTGCATAT cysB 1396813 - 1397787 + | DNA-binding transcriptional dual regulator, O-acetyl-L-serine-binding TERM 1984 1397801 - 1397834 + F 72 -9.7 -3.25809 | overlap 1397798 AATTTCTTGCGTTAT TTTCGGCACCTTT TATGTAGC GAAGGTGCCGGAA TATATTCTCCTTTGT ECS88_1414 1398082 - 1398246 + | hypothetical protein ECS88_1415 1398228 - 1398416 + | hypothetical protein TERM 1985 1399139 - 1399178 + G 75 -7.3 -4.32034 | gap 2, overlap 1399138 TTAACCCACTCTCAC CGGTCGACCTGGTCATTGA CCAC TCGGTGACC-G-TCGATCG TTTTGGTGATGATGA TERM 1986 1400437 - 1400411 - g 70 -7.3 -4.07687 | gap 2, opp_overlap 1400411 1400428 ATCCGCTGGTTAAAA CCAACTGGCTGGC CTC GCC-GCC-GCTGG TGGTTGCCTATGCGC TERM 1987 1401069 - 1401059 - g 72 -8.2 -3.82433 | opp_overlap 1401058, overlap 1401049 ATAAGCAGGAGCAAA CGCC GCT GGCG GTGATTGCCGGGAAA acnA 1398775 - 1401450 + | aconitate hydratase 1 TERM 1988 1401457 - 1401491 + T 77 -11.6 -2.52896 | opp_overlap 1401454 TTGAAGTAACGAGTA TTTGCTTGCCGG TTATTTTGCTT CCGGCAAGCAAA TCAATTACACAATGC TERM 1989 1401510 - 1401536 + T 77 -6.6 -4.44974 | opp_overlap 1401511, overlap 1401511 1401535 ATTACACAATGCAAG AGGGTTATTTGT TCA GCAAATGACCCA TTTTCTCGGCTTTGG TERM 1990 1401511 - 1401535 + T 74 -10.1 -3.26262 | opp_overlap 1401511, overlap 1401510 TTACACAATGCAAGA GGGTTATTTGT TCA GCAAATGACCC ATTTTCTCGGCTTTG ribA 1402104 - 1401514 - | GTP cyclohydrolase II pgpB 1402274 - 1403038 + | phosphatidylglycerophosphatase B yciS 1403187 - 1403495 + | conserved hypothetical protein; putative inner membrane protein TERM 1991 1404309 - 1404295 - g 70 -7.1 -4.08945 | AGCAGTTGGGTAAAA CTGCC GAATG GGCAG AATTCCTGCAGCGCG yciM 1403502 - 1404671 + | hypothetical protein pyrF 1404863 - 1405600 + | orotidine-5'-phosphate decarboxylase yciH 1405600 - 1405926 + | hypothetical protein TERM 1992 1405935 - 1405954 + T 100 -13.6 -3.71687 | opp_overlap 1405935, overlap 1405928 CGGCTAACATAAAAA GCCACGGA TATA TCCGTGGC TTTCGAATATTTTAC TERM 1993 1405954 - 1405935 - T 100 -13.6 -5.0916 | opp_overlap 1405935 1405928 CGGCTAACATAAAAA GCCACGGA TATA TCCGTGGC TTTCGAATATTTTAC osmB 1406270 - 1406052 - | lipoprotein deoT 1407288 - 1406539 - | DNA-binding transcriptional repressor, DeoR family ECS88_1426 1407560 - 1407378 - | hypothetical protein gmr 1409684 - 1407699 - | modulator of Rnase II stability TERM 1994 1409907 - 1409883 - R 100 -13.6 -4.42062 | GAGCGGGGAAATAAA CGGCCCATCC ATGAG GAATGGGCCG TGAAAGGAGATTACG rnb 1411852 - 1409918 - | ribonuclease II TERM 1995 1410103 - 1410092 - G 72 -7.2 -4.15222 | opp_overlap 1410091 1410092 AGGTGCTGGAATAAA GGCG ATAG CGCC GTTATCAACCAAACG TERM 1996 1411558 - 1411571 + g 72 -4.5 -4.62336 | opp_overlap 1411558 GATGATCAGGAACGA TGGCC AGAC GGTCA TTTTTGCCCTGAACT yciW 1413047 - 1411920 - | putative amidase or amidotransferase TERM 1997 1412556 - 1412545 - G 75 -4.4 -4.75309 | opp_overlap 1412545 TGAAAGCCAATAAAA CCAA TGAT TTGG TTAATGATCACACAG TERM 1998 1413172 - 1413152 - R 95 -12.5 -3.71149 | opp_overlap 1413152 1413149, overlap 1413153 GTATAACAGAGATAA CGGGCGGCA GAA CGCCGCCCA ATATTTACCAACAGA TERM 1999 1413171 - 1413153 - R 86 -13.8 -2.81966 | opp_overlap 1413152 1413149, overlap 1413152 TATAACAGAGATAAC GGGCGGCA GAA CGCCGCCC AATATTTACCAACAG fabI 1413980 - 1413192 - | enoyl-[acyl-carrier-protein] reductase, NADH-dependent TERM 2000 1414432 - 1414415 - H 75 -4.9 -4.8269 | TATAATCAGCAAAAA TGAGAAC GATC ATTCTCA CTAAGTGATAGGCCA ECS88_1431 1414437 - 1415024 + | putative transcriptional repressor TERM 2001 1415045 - 1415062 + F 91 -11.3 -4.0825 | opp_overlap 1415044 1415043 1415041 GAATTAACCAATAGC GGGGGAT ATTA ATCCCCC TTATTTCATTGCGAA ECS88_1432 1415140 - 1416294 + | Putative efflux protein, membrane fusion (MFP) family precursor TERM 2002 1417612 - 1417638 + G 74 -10.8 -3.22102 | opp_overlap 1417597, overlap 1417610 1417615 CAATGGGCGAGATTT CTGGCGCACTGG TTG CCATTGCGCTGG TGTTGTCAGCCGTAT TERM 2003 1417615 - 1417635 + G 70 -11.1 -2.80074 | opp_overlap 1417597, overlap 1417612 1417610 TGGGCGAGATTTCTG GCGCACTGG TTG CCATTGCGC TGGTGTTGTCAGCCG TERM 2004 1417956 - 1417966 + G 72 -6.8 -4.16016 | CTGATGATGTGGAAG CTGC CGG GCAG TTTCTTACCCACTGA ECS88_1433 1416294 - 1419401 + | Putative efflux pump (Putative multidrug-efflux transport protein) ECS88_1434 1419405 - 1420778 + | putative outer membrane channel protein of an efflux system ECS88_1435 1420787 - 1421950 + | putative membrane transport protein of an efflux system TERM 2005 1421998 - 1421947 - T 77 -6.6 -4.50661 | gap 1, overlap 1421951 1421955 AATCGACAACCAAAA GTAATGAACACCTCATCCTGA-GGG GGG CCTGTCAGGATGAGGTGCAAAACAC TAACGGTCCTTACGC TERM 2006 1421994 - 1421951 - T 71 -8.2 -3.77325 | gap 1, overlap 1421947 1421955 GACAACCAAAAGTAA TGAACACCTCATCCTGA-GGG GGG CCTGTCAGGATGAGGTGCAAA ACACTAACGGTCCTT TERM 2007 1421990 - 1421955 - T 100 -15.6 -3.54779 | gap 1, overlap 1421951 1421947 ACCAAAAGTAATGAA CACCTCATCCTGA-GGG GGG CCTGTCAGGATGAGGTG CAAAACACTAACGGT sapF 1422804 - 1421998 - | antimicrobial peptide transporter subunit ; ATP-binding component of ABC superfamily transporter TERM 2008 1422747 - 1422764 + g 77 -6.9 -4.45664 | opp_overlap 1422742 1422745 GACGACGAAACCAGC CGGTCCG GTAG CGGAACG TTTTACTTAAATTGC sapD 1423798 - 1422806 - | antimicrobial peptide transporter subunit; ATP-binding component of ABC superfamily transporter sapC 1424688 - 1423798 - | antimicrobial peptide transporter subunit ; permease component of ABC superfamily transporter TERM 2009 1424404 - 1424383 - G 86 -10.9 -3.96892 | gap 1 AAGCGTCACCACAAA TGCGCC-ACC TAC GGTTGGCGCA GCTCCGCTCAGTAAA TERM 2010 1424626 - 1424659 + g 91 -10.9 -4.26188 | gap 1, opp_overlap 1424625 GTCACTATAAAATTT GCGCCAGGC-GGTACG CAG CGTGCCCGGCGGGCGC TTTTCGCTGTATACG sapB 1425640 - 1424675 - | antimicrobial peptide transporter subunit ; permease component of ABC superfamily transporter sapA 1427280 - 1425637 - | antimicrobial peptide transporter subunit; periplasmic-binding component of ABC superfamily transporter TERM 2011 1426074 - 1426094 + g 76 -7.6 -4.1899 | gap 1 CAACCTGTGCCATAT CCGCCTGAA TCAG TTC-GGCGG TTTTCAGTGGACTGG TERM 2012 1427188 - 1427177 - G 70 -3.6 -4.68545 | overlap 1427170 ACGCAATAGACAAAA CCGC TGTC ACGG ATATCAGCATGCGGG ymjA 1427838 - 1427593 - | hypothetical protein TERM 2013 1427963 - 1427922 - R 76 -11 -3.12668 | gap 1, opp_overlap 1427915, overlap 1427953 TATTTTTATAGTTAA TGGCGCGGTGCATTACCCT CAGGC AGGATAATACGCCGCG-CA TTCGACTATTACGTT pspF 1429242 - 1428265 - | DNA-binding transcriptional activator TERM 2014 1428364 - 1428378 + g 93 -8.6 -4.77438 | opp_overlap 1428363 1428366 CCCCTGTTGCAAACT GAGTTG CAG CAACTC TTTTTCCTGCTGCAT TERM 2015 1429991 - 1429981 - g 82 -3.2 -5.27335 | opp_overlap 1429984 TTCGGTAAACAAAAA TCGC TGG ACGA TCAGTTTGCCGAACT pspA 1429408 - 1430076 + | regulatory protein for phage-shock-protein operon pspB 1430130 - 1430354 + | DNA-binding transcriptional regulator of psp operon pspC 1430354 - 1430713 + | DNA-binding transcriptional activator pspD 1430722 - 1430943 + | peripheral inner membrane phage-shock protein pspE 1431018 - 1431332 + | thiosulfate:cyanide sulfurtransferase (rhodanese) TERM 2016 1431349 - 1431364 + F 100 -11.8 -5.36441 | AGAATTCACCATGAG CGGCGC TTAT GCGCCG TTTTTTCTGTCACAC TERM 2017 1432761 - 1432772 + G 81 -5.8 -4.75309 | GTGCCAGGTTTATTC TCGC CCAT GCGA TTTTGTTAAGTTTCC ycjM 1431542 - 1433221 + | putative glucosyltransferase TERM 2018 1434283 - 1434267 - g 76 -7.9 -4.15044 | CTGCCGGTGAACAAA GCGGTGG TGA CTACCGC CACCTGGAAAGACAA ycjN 1433235 - 1434527 + | putative sugar transporter subunit: periplasmic-binding component of ABC superfamily transporter ycjO 1434548 - 1435429 + | putative sugar transporter subunit: permease component of ABC superfamily transporter TERM 2019 1435939 - 1435903 - g 88 -10.9 -4.11216 | TGTTTATGCTGAAAA GCTACTTCGACACCATC CCT GATGAGATCGAAGAAGC GGCGATGATGGATGG ycjP 1435416 - 1436258 + | putative sugar transporter subunit: permease component of ABC superfamily transporter TERM 2020 1437522 - 1437511 - g 77 -7.2 -4.58308 | CAGCAATCAAAGAAA CCGG TTTA CCGG TGACCACCGCCTGCG ycjR 1437360 - 1438148 + | putative isomerase/epimerase TERM 2021 1438268 - 1438290 + G 100 -15.6 -3.53012 | opp_overlap 1438259 CAATGATCTGGAACT GGTGGCTGTC TGT GACAGCCGCC TTTCCCAGGCGCAGG ycjS 1438158 - 1439213 + | putative oxidoreductase, NADH-binding ycjT 1439210 - 1441477 + | putative glycosyl hydrolase/phosphorylase ycjU 1441474 - 1442133 + | putative glucose-1-phosphate phosphodismutase, beta-phosphoglucomutase TERM 2022 1443020 - 1442996 - g 79 -12.1 -3.09671 | ATCGTAATGGGAATA CGCCCGGAAGA TAT TCATCCGGACG CGCAAGAGGAAAATA ycjV 1442147 - 1443229 + | putative sugar transporter subunit: ATP-binding component of ABC superfamily transporter ompG 1443274 - 1444179 + | outer membrane porin TERM 2023 1444224 - 1444193 - T 74 -10.8 -2.74799 | opp_overlap 1444193, overlap 1444192 GATAATGTGCTAAAT TGCCGGATGCGGGG CGAG CGCCAAATCCGGCA TACATTTATTTCAAC ycjW 1445228 - 1444230 - | putative DNA-binding transcriptional regulator TERM 2024 1444349 - 1444363 + g 77 -11.4 -3.25823 | overlap 1444357 TCGGAACATCGATGC CGCCTG GTG CAGGCG TTAATATAAACGACA TERM 2025 1445005 - 1444995 - G 75 -4.6 -4.84017 | AACTTCCGAGAAAAA CGGA TTA CCCG CCGTAGTTTTGGTCG ycjX 1445384 - 1446781 + | conserved hypothetical protein; putative nucleoside triphosphate hydrolase domain ycjF 1446778 - 1447839 + | conserved hypothetical protein; putative inner membrane protein tyrR 1447987 - 1449528 + | DNA-binding transcriptional dual regulator, tyrosine-binding TERM 2026 1449577 - 1449523 - T 83 -11.1 -3.63862 | gap 2, opp_overlap 1449525 1449531, overlap 1449529 1449538 CAGAAGAAGAACGAA GAGTAAGCGTGAATATGCCTGATGGTG CAA CACCATCAGGCATATT-A-ACTTATGC TTTCAGTACAGCCAG TERM 2027 1449525 - 1449577 + T 100 -16.5 -3.64703 | opp_overlap 1449523 1449529 1449538, overlap 1449531 GAAGAAGAACGAAGA GTAAGCGTGAATATGCCTGATGGTG CAA CACCATCAGGCATATTAACTTATGC TTTCAGTACAGCCAG TERM 2028 1449573 - 1449529 - T 100 -15.9 -3.4382 | opp_overlap 1449525 1449531, overlap 1449523 1449538 AAGAACGAAGAGTAA GCGTGAATATGCCTGATGGTG CAA CACCATCAGGCATATTAACTT ATGCTTTCAGTACAG TERM 2029 1449531 - 1449571 + T 100 -22.9 -3.61609 | opp_overlap 1449529 1449523 1449538, overlap 1449525 GAACGAAGAGTAAGC GTGAATATGCCTGATGGTG CAA CACCATCAGGCATATTAAC TTATGCTTTCAGTAC TERM 2030 1449564 - 1449538 - T 100 -19.6 -3.06737 | opp_overlap 1449531 1449525, overlap 1449529 1449523 GAGTAAGCGTGAATA TGCCTGATGGTG CAA CACCATCAGGCA TATTAACTTATGCTT tpx 1450078 - 1449572 - | lipid hydroperoxide peroxidase TERM 2031 1450453 - 1450410 - g 70 -6.7 -4.1347 | gap 1, opp_overlap 1450446 1450447 CCGCAATTAGAGAAA GGGCTGACACGGGAGGAGTT GCAAA AAATCCTCCC-TGCCGGCGC AGCACGTAATGCGCT ycjG 1450197 - 1451162 + | L-Ala-D/L-Glu epimerase mpaA 1451925 - 1451137 - | murein peptide amidase A TERM 2032 1451846 - 1451831 - G 73 -11.8 -2.71712 | overlap 1451830 GTTCCGGGCGGAAAT GCGCCG CGTT CGGCGC GTGGGCGAGTTACGG TERM 2033 1451916 - 1451929 + g 75 -5.3 -4.63932 | TTGTGCAAATTTTGC GGATT ATCA AATCC TTTTCTTCAACGCTA TERM 2034 1452136 - 1452112 - R 100 -13.7 -4.22591 | AATAAGTTTAATAAA TCGTACTGCAC ATA GTACAGTACGA TGGTAGCTATATAAT ymjC 1452794 - 1452156 - | putative NAD(P) binding enzyme ycjY 1453797 - 1452865 - | putative hydrolase ycjZ 1453923 - 1454822 + | putative nucleic acid-binding regulator TERM 2035 1455398 - 1455384 - g 70 -7.1 -4.11884 | AATCAGAACGAGAAA GGGGA GATTG TCCCC GGCGTTGCGACTCAG TERM 2036 1456164 - 1456154 - g 70 -6.8 -4.09685 | opp_overlap 1456153 1456154 GGGGACGGGCGAAAA GCCA GCG TGGC ATTTTACACCAGATG mppA 1455159 - 1456772 + | murein tripeptide (L-ala-gamma-D-glutamyl-meso-DAP) transporter subunit ; periplasmic-binding component of ABC superfamily TERM 2037 1456784 - 1456811 + T 87 -14.2 -2.74525 | overlap 1456779 1456781 TTAATGTGATGGGAA CTGGCGTTACCC TTGT GGATAACGCCAG TGATGTCTGATTTAG ynaI 1457854 - 1456823 - | conserved hypothetical protein; putative inner membrane protein ynaJ 1458098 - 1458355 + | conserved hypothetical protein; putative inner membrane protein TERM 2038 1458385 - 1458364 - T 100 -10.1 -5.30155 | opp_overlap 1458366, overlap 1458366 GCAGTAAGTAAAAAA TAGGCCCGA TAAC TCGGGCCTT GTCAGTTATTGAAGA TERM 2039 1458366 - 1458383 + T 93 -12.7 -3.47751 | opp_overlap 1458366 1458364 AGTAAGTAAAAAATA GGCCCGA TAAC TCGGGCC TTGTCAGTTATTGAA TERM 2040 1458383 - 1458366 - T 100 -12.7 -4.27681 | opp_overlap 1458366, overlap 1458364 AGTAAGTAAAAAATA GGCCCGA TAAC TCGGGCC TTGTCAGTTATTGAA uspE 1459355 - 1458405 - | stress-induced protein TERM 2041 1459485 - 1459437 - R 95 -14.2 -3.23638 | opp_overlap 1459433 TGAAACAGTGATGAA CCTTCTGTCAGATCAATAAATC AGAAA AATTTAATGATATGACAGAAGG ATAGTGAGTTATGCG fnr 1460259 - 1459507 - | DNA-binding transcriptional dual regulator, global regulator of anaerobic growth TERM 2042 1460406 - 1460389 - R 78 -8.5 -4.14739 | opp_overlap 1460386 1460389 CTATCTATTTGAAAA CCCTTAA GTTG TTAAGGG TGACTTTACATAAAA ogt 1460969 - 1460454 - | O-6-alkylguanine-DNA:cysteine-protein methyltransferase TERM 2043 1461372 - 1461344 - R 100 -10.3 -5.9003 | AAATGAATAAAAAAA TAGAGCCTGTCGA CAT CCGCCAGACTCTA CAGTACACACAGCAG ECS88_1479 1462316 - 1461501 - | Putative HTH-type transcriptional regulator TERM 2044 1463325 - 1463315 - g 77 -6.8 -4.53303 | opp_overlap 1463314 1463315 GATTCCGATAGAAAA TGCC ACT GGCA ATTTCACCAAAATTG ECS88_1481 1462410 - 1463441 + | Putative HlyD family secretion protein TERM 2045 1463588 - 1463571 - g 74 -7.7 -4.01603 | opp_overlap 1463575 CAGGTAAAGACGAAA TGGCCTG GCTT CAGACCA GCTATTTAATTGCCG ECS88_1482 1463438 - 1464952 + | putative drug resistance transporter EmrB/QacA subfamily ydaL 1465147 - 1465710 + | hypothetical protein ydaM 1466963 - 1465731 - | putative diguanylate cyclase, GG[D/E]EF domain signalling protein TERM 2046 1466594 - 1466565 - G 82 -2.9 -5.28176 | gap 1, opp_overlap 1466565, overlap 1466566 1466567 GTTAGTCAGAAAAAA GCGCGCATAAAAAC CTT GTTTTT-TGCGCTG ATAATTTGCCGAGCG ydaN 1467218 - 1468201 + | putative divalent cation transporter TERM 2047 1468391 - 1468410 + F 100 -10 -5.85178 | ATTGATTCGTACGAC GCCGACTT TGAT GAGTCGGC TTTTTTTTGCCTGTT ECS88_1486 1468476 - 1468649 + | hypothetical protein dbpA 1468679 - 1470052 + | ATP-dependent RNA helicase, specific for 23S rRNA TERM 2048 1470170 - 1470147 - T 89 -14.6 -2.80074 | opp_overlap 1470144 1470136, overlap 1470144 1470142 GCCTCCATAAGAGTA GCCCGATACG CTTG CGCATCGGGC GCTATCCTGGTTATT ydaO 1471116 - 1470181 - | putative C32 tRNA thiolase TERM 2049 1470861 - 1470873 + g 84 -10.5 -3.71672 | CGGGCAGAACGTGTT CCGGG AAG CCCGG TTGCTTTTGATCGAG TERM 2050 1471046 - 1471056 + g 74 -2.4 -5.0809 | GCTTCGCCCACGTTA CGAC GCA GACG TTTTTGTAATTTGTT TERM 2051 1472304 - 1472326 + r 81 -3.4 -5.4659 | overlap 1472305 1472306 ATTGATGTTTGGTCA TGCCAATGCA CTA TGTATTGGGG TTTTTATTTCTATTA TERM 2052 1473014 - 1473000 - R 71 -4.3 -4.59853 | TTAATGTGGCAAAAA TGGTA GGCGA TACCA TGCAGAGTAAACCGT TERM 2053 1473120 - 1473101 - R 71 -2.1 -5.03747 | opp_overlap 1473102, overlap 1473102 AAATTCCTGAAAAAA CGATACC TATAAT GGTATCT TTCTTTATGATGCTA TERM 2054 1473102 - 1473119 + r 74 -5.6 -4.59944 | opp_overlap 1473102 1473101 AATTCCTGAAAAAAC GATACC TATAAT GGTATC TTTCTTTATGATGCT TERM 2055 1473238 - 1473215 - R 74 -9.6 -3.39327 | GCGGCATACCTATAA TCCAGGCATA GAAC TATGCCAGGA AACATTGCGTGGTTC TERM 2056 1473416 - 1473435 + r 74 -10.7 -2.55351 | opp_overlap 1473416, overlap 1473415 GAAATAAATCAAAAA GCCCGCA GCAATG TGCGGGC GTTAGTGTCAGCGCA TERM 2057 1473435 - 1473416 - R 100 -10.7 -5.13137 | opp_overlap 1473415 1473416 GAAATAAATCAAAAA GCCCGCA GCAATG TGCGGGC GTTAGTGTCAGCGCA uspF 1473877 - 1473443 - | stress-induced protein, ATP-binding protein TERM 2058 1474009 - 1473991 - R 93 -10.2 -4.91459 | overlap 1473981 GAATAGGCAGAAAAA GCCCGCCA AAA CAGCGGGC AGGGGGATTTAGAAC ompN 1475151 - 1474018 - | outer membrane pore protein N, non-specific TERM 2059 1475485 - 1475456 - R 70 -7.1 -3.97043 | opp_overlap 1475461, overlap 1475461 TCCAACACATAAGAA GACAAGCCCGAAC AGTC GTCCGGGCTTTTT TTTAGAATTGGATAA TERM 2060 1475480 - 1475461 - R 91 -11.4 -3.88971 | opp_overlap 1475461, overlap 1475456 CACATAAGAAGACAA GCCCGAAC AGTC GTCCGGGC TTTTTTTTAGAATTG TERM 2061 1475461 - 1475480 + r 100 -9.2 -5.81032 | opp_overlap 1475461 1475456 CACATAAGAAGACAA GCCCGAAC AGTC GTCCGGGC TTTTTTTTAGAATTG ydbK 1479041 - 1475517 - | putative 2-oxoacid-flavodoxin fused oxidoreductase:conserved protein; 4Fe-4S cluster binding protein TERM 2062 1477361 - 1477348 - G 77 -3.1 -5.1287 | overlap 1477349 GTCAGATGGAAAAAA GCCAT CTGC ATGAC GGTATTAATACGGGC TERM 2063 1477391 - 1477410 + g 70 -10 -3.16564 | gap 1 CCGCCAGGCCACATT CGCGGGCGA TTT TCGCC-GCG TTAATCACATAGAAG TERM 2064 1478045 - 1478057 + g 70 -6.9 -4.13903 | GATAGAGCGGTTCTG CCTGG GCA CCGGG TTCTTTGGTTCTGTC TERM 2065 1479234 - 1479219 - H 80 -4.6 -5.27769 | opp_overlap 1479224 ATAAAAAAGTAAAAA TGCGGG GCAA CGCGCA GGACAGCTCTCGACG ydbJ 1479315 - 1479581 + | hypothetical protein hslJ 1480000 - 1479578 - | heat-inducible protein TERM 2066 1480103 - 1480081 - R 100 -14.9 -3.66018 | GGATTATCTGAATAA GCTCCCCTG GAATG CAGGGGAGC GGCAAGATTAAACCA ldhA 1481100 - 1480111 - | fermentative D-lactate dehydrogenase, NAD-dependent TERM 2067 1480878 - 1480903 + g 84 -7.5 -4.66953 | overlap 1480876 TGAAACCGGCACAGC GCAAGGCGATA TATT TAACGCCGTGC TTTTTCAGCTCTTCC TERM 2068 1482307 - 1482282 - g 89 -13.3 -3.39862 | ATTAAGCATGGATAA CAGCCAGCTGC CTCT GCAGCTGACCG GTGAAGCGAAACAGG TERM 2069 1483641 - 1483626 - g 74 -10.4 -3.51934 | overlap 1483624 GCGGCTGGATAAAGA CACCGC AGAT GCGGTG GTGAAAGACAATATG ydbH 1481308 - 1483947 + | hypothetical protein ynbE 1483944 - 1484129 + | putative lipoprotein ydbL 1484137 - 1484463 + | hypothetical protein TERM 2070 1484789 - 1484810 + F 76 -8 -4.21773 | opp_overlap 1484788 TTTAAATAATCAATT GGTCGGGT CAGGGT ATCCGACC TTCTTTATATTCGCC TERM 2071 1484936 - 1484924 - g 70 -5.5 -4.43283 | overlap 1484925 TTACAGAAATAGAAA CCACC ACA GGTGA AAAGAAAAATACCAA TERM 2072 1485128 - 1485108 - g 86 -10.5 -3.92625 | CATAGTGGAACTAAA CGACGATGA TGA TCATCATCG CAATAATTCTCCACT TERM 2073 1485548 - 1485536 - g 75 -5.5 -4.67556 | overlap 1485540 ACAACACTGGAAAAA CCATC GTC GACGG CAAAGGCGCCACCGG TERM 2074 1486572 - 1486558 - g 70 -5.6 -4.30987 | overlap 1486560 ACGGTGGATAACAAA GGCGGT ATG ACCGTC ACCGATCCGGACTCC TERM 2075 1487076 - 1487056 - g 81 -9.7 -3.91473 | overlap 1487046 1487070 ATAAACGGTGACAAA GCCATCGTC AAC AACGACGGC GACAGCACGATCCTT TERM 2076 1489249 - 1489235 - g 77 -8.5 -4.06185 | opp_overlap 1489230 1489235 TAGATAAAGATCAAA CCGCG ACTAA CGCGG TAGATTATTTTTACG ydbA 1484839 - 1493154 + | putative autotransported outer membrane protein involved in cell adhesion TERM 2077 1493200 - 1493177 - f 95 -11.8 -4.21811 | gap 1, opp_overlap 1493177 CATGTAATACATAAA CCGCAACGCTG ATA CAG-GTTGCGG TTTTTTTATTGCCGG TERM 2078 1493177 - 1493200 + F 100 -11.8 -5.7946 | gap 1, opp_overlap 1493177 CATGTAATACATAAA CCGCAACGCTG ATA CAG-GTTGCGG TTTTTTTATTGCCGG ydbC 1493374 - 1494234 + | putative aldo/keto reductase, NAD(P)-binding TERM 2079 1494239 - 1494274 + T 83 -6.3 -5.15634 | opp_overlap 1494239 1494241 1494243 1494248, overlap 1494243 1494248 CGCGAGAATAACGAA TATACAAAAGGGAAA GATGCA TTTCCCTTTTGTTTC TTTTTTAATGGCATG TERM 2080 1494272 - 1494241 - T 71 -8.9 -3.36276 | opp_overlap 1494239 1494243 1494248, overlap 1494239 1494243 1494248 CGAGAATAACGAATA TACAAAAGGGAAA GATGCA TTTCCCTTTTGTT TCTTTTTTAATGGCA TERM 2081 1494270 - 1494243 - T 81 -11.5 -3.23854 | opp_overlap 1494239 1494243 1494248, overlap 1494241 1494239 1494248 AGAATAACGAATATA CAAAAGGGAAA GATGCA TTTCCCTTTTG TTTCTTTTTTAATGG TERM 2082 1494243 - 1494270 + T 100 -11.5 -5.0917 | opp_overlap 1494243 1494241 1494239 1494248, overlap 1494239 1494248 AGAATAACGAATATA CAAAAGGGAAA GATGCA TTTCCCTTTTG TTTCTTTTTTAATGG TERM 2083 1494265 - 1494248 - T 74 -5.6 -4.70453 | opp_overlap 1494243 1494239 1494248, overlap 1494243 1494241 1494239 AACGAATATACAAAA GGGAAA GATGCA TTTCCC TTTTGTTTCTTTTTT TERM 2084 1494248 - 1494265 + T 87 -5.6 -5.3472 | opp_overlap 1494248 1494243 1494241 1494239, overlap 1494243 1494239 AACGAATATACAAAA GGGAAA GATGCA TTTCCC TTTTGTTTCTTTTTT ECS88_1502 1494503 - 1494279 - | hypothetical protein TERM 2085 1494706 - 1494716 + G 71 -2.4 -4.89852 | CCTCTTTTTGCTATT GCCC ATC GTGC TTTTTATCCGTATGA ynbA 1494533 - 1495138 + | conserved hypothetical protein; putative inner membrane protein TERM 2086 1495989 - 1496001 + G 100 -3.3 -6.17669 | TGACTCATTAATTTT CACCG CTC CGGTA TTTTTTTATTTTATT ynbB 1495138 - 1496034 + | putative membrane associated CTP-phosphosubstrate transferase TERM 2087 1496944 - 1496971 + G 74 -8.4 -3.96148 | gap 1, opp_overlap 1496937 1496947 CATGAAGACCGCACA GGA-CCATCAGCG GAT CGCTGGCGGCTCC TTTCTGGTGGACCCG ynbC 1496050 - 1497807 + | putative hydrolase ynbD 1497821 - 1499113 + | putative membrane associated phosphatase azoR 1499772 - 1499167 - | NADH-azoreductase, FMN-dependent TERM 2088 1499968 - 1499942 - H 74 -3.1 -5.10933 | gap 1, overlap 1499949 TCATTTAAAAGAAAA TTAATCAGGCAG ACTA CTGCCC-ACTAA CGTTATGACAGAACA TERM 2089 1501626 - 1501605 - g 71 -2.9 -4.7373 | overlap 1501607 GCATCGGACGAAAAA CATCGTCGC TTCC ACGACAAAG AGTCTGACTTCCTCG TERM 2090 1501700 - 1501682 - g 75 -6.7 -4.30576 | opp_overlap 1501682 TGGCGAGCAGCAAAA GGCGCTT TCTTC AAACGCC TTCCGTCGCCTGTGC TERM 2091 1503815 - 1503843 + G 70 -6.8 -4.08216 | gap 1, overlap 1503817 CGCTCAACAACTTGG CACGCCTTATCCG ATTT CGGATAAG-CGTA TTTTGCAGGCGATGG TERM 2092 1503817 - 1503841 + G 73 -9.4 -3.63922 | gap 1, overlap 1503815 CTCAACAACTTGGCA CGCCTTATCCG ATTT CGGATAAG-CG TATTTTGCAGGCGAT hrpA 1500030 - 1503875 + | ATP-dependent helicase ydcF 1504148 - 1504948 + | hypothetical protein TERM 2093 1504988 - 1504952 - f 74 -5.8 -4.62069 | opp_overlap 1504953, overlap 1504953 TCGTTACGTTAAAAA TTGCCCGTTCGTGAAC CAATT GTTTGCAAACGGGCAT GACTTCTGACTTTTA TERM 2094 1504987 - 1504953 - f 71 -9.3 -3.3692 | opp_overlap 1504953, overlap 1504952 CGTTACGTTAAAAAT TGCCCGTTCGTGAAC CAATT GTTTGCAAACGGGCA TGACTTCTGACTTTT TERM 2095 1504953 - 1504987 + F 77 -11.5 -2.62718 | opp_overlap 1504953 1504952 CGTTACGTTAAAAAT TGCCCGTTCGTGAAC CAATT GTTTGCAAACGGGCA TGACTTCTGACTTTT aldA 1505145 - 1506584 + | aldehyde dehydrogenase A, NAD-linked TERM 2096 1506619 - 1506594 - T 80 -10.4 -3.71527 | overlap 1506596 TCGTAATGAGTGAAA GAGGCGGAGG TTTTTT CCTCCGCCTG TGCGCGTCAGAGTTT TERM 2097 1506617 - 1506596 - T 100 -13 -3.43853 | overlap 1506594 GTAATGAGTGAAAGA GGCGGAGG TTTTTT CCTCCGCC TGTGCGCGTCAGAGT gapC 1507627 - 1506626 - | glyceraldehyde-3-phosphate dehydrogenase C TERM 2098 1507790 - 1507773 - H 73 -4.9 -4.6971 | gap 1, overlap 1507774 1507775 GAAATTTTAAGAAAA GCCCGTTA TGT TAACGG-C AAATTATGTTAAAGC cybB 1507816 - 1508346 + | cytochrome b561 TERM 2099 1508396 - 1508364 - f 77 -4.9 -4.92385 | overlap 1508378 1508382 GATATTTAAAGAAAA CGCCTGTACTA AAACCGACCCG TGGTACAGGCG AAGAATACGGGCCTA TERM 2100 1508620 - 1508635 + G 70 -5.4 -4.38712 | ACTTATCCTGGTTAT GGGAAC GCTT GTTTCC TTTTATGCCGATGCC ydcA 1508591 - 1508764 + | hypothetical protein TERM 2101 1509424 - 1509403 - T 75 -8.7 -3.76413 | opp_overlap 1509401, overlap 1509406 TGTGAAAATGTTAAA GGAGGGATC GACA GATCCCTTC ACCTTTCAGAACGGC ydcI 1510353 - 1509430 - | putative DNA-binding transcriptional regulator TERM 2102 1510928 - 1510945 + G 75 -5.5 -4.7078 | ATGATGCTTCTCTGG CGCGTAA TCCC TTCCGCG TTTTTACCTCGTTAC ydcJ 1510570 - 1511913 + | hypothetical protein TERM 2103 1512671 - 1512693 + GT 70 -9.1 -3.15249 | overlap 1512669 TGTAGTATCATTCCT CGGCGCG AGTTATTTC CGCGCCG TTGATGACACATATC ECS88_1520 1513917 - 1513714 - | hypothetical protein mdoD 1512168 - 1513793 + | glucan biosynthesis protein, periplasmic TERM 2104 1513806 - 1513829 + gF 75 -11 -2.90075 | TAATCGTTTTTTCTT CGGCATCTTC TTCG GGAGGTGCCG TCTGGTTAAACACGA ydcH 1513933 - 1514157 + | hypothetical protein TERM 2105 1514168 - 1514184 + F 100 -10.8 -5.02074 | overlap 1514175 TGTAAACTTTCCTAA GCCGCC AGCCA GGCGGC TTTTTTAACAGCTGC rimL 1514220 - 1514759 + | ribosomal-protein-L7/L12-serine acetyltransferase ydcK 1515731 - 1514751 - | putative enzyme TERM 2106 1515182 - 1515170 - G 77 -3.3 -5.0925 | opp_overlap 1515170 TGGCAAAATCAAAAA CTTCG GCG CGATG TTCAATAAAAGCATA TERM 2107 1516337 - 1516355 + G 72 -5.3 -4.56597 | gap 1, overlap 1516334 TGGTGCGTTGGGCTA CACC-GAC GCCG GTCTGGTG TTTTTAGGCGCAGGC tehA 1515855 - 1516847 + | potassium-tellurite ethidium and proflavin transporter TERM 2108 1517383 - 1517354 - g 73 -9.2 -3.58428 | GTGAAATACAATGAA GACGTCGGCGAG CTGCAC CGCACCGACGCC AACGGTAATCGTATT tehB 1516844 - 1517437 + | putative AdoMet-dependent methyltransferase TERM 2109 1517473 - 1517453 - f 71 -5.3 -4.44667 | TCCGGTAAGAACAAA GCGCGTGAA AAT TCCCCACGC TGAGATGGTTTACTG TERM 2110 1517821 - 1517837 + G 79 -3.7 -5.03145 | TCTAAAATCACCCAG CCAGA TAAATAT TCTGG TTTTTTAAACAATTA TERM 2111 1517882 - 1517893 + G 70 -5.8 -4.28774 | AAACAACCTCGGCAA CAGG TAAA CCTG TTTTACGTTGGGTAG ydcL 1517740 - 1518408 + | putative lipoprotein TERM 2112 1518417 - 1518436 + T 100 -13.6 -5.21236 | AAAGTAGTTCCAGAC GCGCCATC GTTA GATGGCGC TTTTTATTATCGGTT ydcO 1519615 - 1518443 - | putative benzoate transporter TERM 2113 1518743 - 1518730 - G 100 -8.1 -5.68438 | overlap 1518732 CGATCAAATAAAAAA TGCCG GCAA CGGCA GCGGCCAGCCAACGT ydcN 1519707 - 1520243 + | putative DNA-binding transcriptional regulator TERM 2114 1520272 - 1520292 + F 78 -6.1 -4.63527 | overlap 1520274 TTCGCAACGTCGCGC TTGTGGCTA AAA TAGCCGCCA TTTTTCAGCTACTGG ydcP 1520316 - 1522277 + | putative peptidase yncJ 1522599 - 1522369 - | hypothetical protein TERM 2115 1523323 - 1523310 - g 81 -4.5 -5.12068 | CACAGGCAATAAAAA TGCCG AAAG CGACA GTCATTCCAGTCACA TERM 2116 1523990 - 1524002 + G 70 -5.5 -4.31688 | opp_overlap 1523982 1523981, overlap 1523981 GCGAAAGCGTGGGAT CGCCA CGA TGGTG TTTTGCATTGCTCTT ydcR 1523093 - 1524499 + | putative DNA-binding transcriptional regulator fused with a domain with PLP-binding motif ydcS 1524744 - 1525889 + | putative spermidine/putrescine transporter subunit ; periplasmic-binding component of ABC superfamily transporter ydcT 1525907 - 1526740 + | putative spermidine/putrescine transporter subunit ; ATP-binding component of ABC superfamily tranporter TERM 2117 1526960 - 1526976 + G 72 -6.5 -4.32177 | CCTTCACGTCCAGGT CTGGGTA AGG TGCCCGG TTTCTTCTGGCGTAA TERM 2118 1527224 - 1527234 + G 70 -6.8 -4.14243 | overlap 1527198 1527219 GTGACTATCGCCAGC GCCA TTC TGGC TTTTCCAATGGCGTG TERM 2119 1527668 - 1527684 + G 71 -2.9 -4.77165 | TCTATCTTTACCTTC TCACTCA CGC TGGGCGA TTTTATTGTCCCGCA ydcU 1526921 - 1527862 + | putative spermidine/putrescine transporter subunit ; permease of ABC superfamily transporter TERM 2120 1528263 - 1528276 + G 70 -3.8 -4.68994 | TTTTTCACCATCGTG GTCG GTCATG CGAC TTTTTGCGTAGTGGT TERM 2121 1528451 - 1528477 + G 74 -8.1 -4.08216 | gap 1 GCTGGCGTTTGCCTT GTCGTT-CGATG AAAT CATCGTGACGAC TTTTACGGCAGGTCA ydcV 1527852 - 1528646 + | putative spermidine/putrescine transporter subunit; permease component of ABC superfamily ydcW 1528668 - 1530092 + | medium chain aldehyde dehydrogenase ydcX 1530404 - 1530652 + | conserved hypothetical protein; putative inner membrane protein ydcY 1530738 - 1530971 + | hypothetical protein TERM 2122 1531005 - 1530978 - T 80 -8.4 -4.25283 | gap 1, overlap 1530981 ATCCTCTGATTAAAA TGAGCGTCTGGCC ACC AGCCAGGCGC-CA ACCACAAGTAAAATT TERM 2123 1531003 - 1530981 - T 81 -11.2 -3.13504 | overlap 1530978 CTCTGATTAAAATGA GCGTCTGGCC ACC AGCCAGGCGC CAACCACAAGTAAAA ydcZ 1531421 - 1530972 - | conserved hypothetical protein; putative inner membrane protein yncA 1531936 - 1531418 - | putative acyltransferase with acyl-CoA N-acyltransferase domain TERM 2124 1532409 - 1532386 - R 91 -8.8 -4.99645 | overlap 1532389 AGCCGATAAATAAAA TACGCCCGGC AAAT ACCGGGCTTA AAGATAATTACTCAA TERM 2125 1532406 - 1532389 - R 73 -10.5 -3.05964 | overlap 1532386 CGATAAATAAAATAC GCCCGGC AAAT ACCGGGC TTAAAGATAATTACT yncD 1534519 - 1532417 - | putative iron outer membrane receptor TERM 2126 1533848 - 1533863 + g 76 -4 -4.96848 | AATGCGTACGCCCAG TTTGGC ATTG GCTAAA TTTTTCTGTGCGCCG TERM 2127 1534942 - 1534919 - g 72 -4.4 -4.72497 | overlap 1534920 TAGCCAGCAAGAAAA CGCGCTGTGG CTTG CCACTTCGCA AAGCCGCAAACTGGA yncE 1534761 - 1535822 + | hypothetical protein TERM 2128 1535904 - 1535926 + T 100 -14.9 -4.19953 | GTCAGTAGTCTGAAT TTGCCCGGC ACGTA GCCGGGCAA TTTTGCAATTAACTC ansP 1537434 - 1535935 - | L-asparagine transporter TERM 2129 1536566 - 1536556 - G 74 -3.2 -4.9792 | CAGTTTAGAGAAAAA CGTC ACG AACG GACTTTGCCCCGCCT TERM 2130 1537587 - 1537609 + H 70 -7.1 -3.87815 | gap 1, opp_overlap 1537576 1537587 1537585 AAACGATGCAAAACA TCCCCTTACA ATCC TG-AAGGGGA TTTATACAACTGACG ECS88_1551 1538842 - 1539126 + | conserved hypothetical protein, PAAR motifs TERM 2131 1539546 - 1539525 - gf 81 -10.9 -3.52919 | gap 1, opp_overlap 1539525 1539524 1539522 ATTACTGAACGAGAA CGGCGT-CAC GGA GTGGACGCCG CTGTTTTATGAGGAC TERM 2132 1539525 - 1539546 + GF 75 -10.9 -2.8733 | gap 1, opp_overlap 1539525, overlap 1539524 1539522 ATTACTGAACGAGAA CGGCGT-CAC GGA GTGGACGCCG CTGTTTTATGAGGAC ECS88_1552 1539145 - 1541550 + | conserved hypothetical protein, putative VgrG/E protein associated with Rhs elements TERM 2133 1541995 - 1541983 - gf 100 -3.3 -5.79526 | opp_overlap 1541992 AGATGGCAAAAAAAA TCCAG TAA CGGGA AAGGATTCTCATGTT ECS88_1553 1541504 - 1542301 + | putative zinc-dependent metallopeptidase TERM 2134 1542387 - 1542376 - g 100 -3 -5.97575 | AAGCTATAAAAAAAA TCAT AATA ATGA CAATCGTAAATATTA ECS88_1554 1542354 - 1543073 + | conserved hypothetical protein; putative exported protein ECS88_1556 1543472 - 1543687 + | hypothetical protein yddH 1544573 - 1544004 - | hypothetical protein nhoA 1544748 - 1545593 + | N-hydroxyarylamine O-acetyltransferase TERM 2135 1545606 - 1545637 + T 79 -12.2 -2.52795 | opp_overlap 1545624, overlap 1545616 1545632 TAATTTATGTCAGGT TGCCGGATGTGGCG TAAA CGCCTTATCCGGCC TACATTAGCCCGGTT yddE 1546582 - 1545689 - | hypothetical protein narV 1547342 - 1546662 - | nitrate reductase 2 (NRZ), gamma subunit TERM 2136 1546971 - 1546946 - G 78 -5.4 -4.79174 | overlap 1546963 ACTGAATTAACAAAA TGGCGAGGAT CAGGAT ATCCGCACCA GAAGACGTCGCCCTG TERM 2137 1547303 - 1547285 - G 71 -2.3 -4.98255 | overlap 1547286 TTCCAAGGATAAAAA CCGTGCC GCACA AGTACGG GTAGATATCGTAAAA narW 1548034 - 1547339 - | nitrate reductase 2 (NRZ), delta subunit (assembly subunit) narY 1549578 - 1548034 - | nitrate reductase 2 (NRZ), beta subunit TERM 2138 1549481 - 1549495 + g 75 -5.6 -4.59773 | TACTCCATGCCTTCG CGTCCG GTC CAGACG TTTTTACAGGTCACC narZ 1553315 - 1549575 - | nitrate reductase 2 (NRZ), alpha subunit TERM 2139 1552092 - 1552118 + g 71 -3.1 -4.82901 | gap 1 GGTTTCCGTACCGGC GGCA-ATGGA TTCCAGGT TCCATTTGCC TTTTTCTCCCCAGCG TERM 2140 1552398 - 1552418 + g 85 -11.9 -3.64703 | opp_overlap 1552376, overlap 1552401 GCCCATTGCCATTGC CAGGGCACT ATC AGTGCCTTG TTTCGGTGCCAGCCA TERM 2141 1552401 - 1552415 + g 81 -10 -3.96216 | overlap 1552398 CATTGCCATTGCCAG GGCACT ATC AGTGCC TTGTTTCGGTGCCAG TERM 2142 1553029 - 1553048 + g 76 -10.6 -3.32769 | opp_overlap 1553023, overlap 1553022 CAGGAGTAACTTGCG CCACGCGG GCAG CCGCGAGG TTCATGATTTGGCAG narU 1554798 - 1553410 - | nitrate/nitrite transporter TERM 2143 1553568 - 1553554 - G 85 -2.7 -5.4505 | CTGCGGAATAAAAAA GCCGC CCACT GCGCC AATGGCTGAGATAAA TERM 2144 1553790 - 1553768 - G 72 -8.5 -3.79021 | gap 1 TAAAATGCGATGAAA TTACCGGAGC CTGT GC-CCGGTAA GGTAAGGAACAGCAG TERM 2145 1553846 - 1553829 - G 71 -2.7 -4.86033 | AAATCGCCATAAAAA TGAAGTT GATC AACGTCA CCCGCACGCCGCCGA TERM 2146 1554266 - 1554240 - G 71 -3.1 -4.84761 | gap 2, overlap 1554244 ATACGGGTACAAAAA TGAC-CAGC-GGT GCA ACCAGCTGCATCA CACTTACACCTAAGT TERM 2147 1555065 - 1555043 - R 72 -9.8 -3.1706 | opp_overlap 1555043 1555040 1555044 AATTTATCTGATTAA CTGCCGGGCC GTA GACCCGACAA TTATTTTAGCCACGA yddG 1555895 - 1555071 - | metabolite and drug efflux pump TERM 2148 1556958 - 1556930 - g 90 -7.6 -4.75174 | gap 1 GATGGAAGCGAAAAA CAACAACGATGCA ACCT TG-ATCGTTGTCG ATCCCCGTTTTACGC TERM 2149 1557742 - 1557714 - g 76 -9 -3.73775 | gap 1 GTTAGCCTGATGAAA TCTTTCTACGGCG ATGC CGC-GCAGAAAGA GAACAACTGGGGCTA fdnG 1556184 - 1559231 + | formate dehydrogenase-N, alpha subunit, nitrate-inducible TERM 2150 1560030 - 1560018 - g 71 -9.1 -3.5394 | opp_overlap 1560017 1560020, overlap 1560007 AAAGGCGCGTTGAAA CCGCT GGC AGCGG CTGGCTTTATTGCCA fdnH 1559244 - 1560128 + | formate dehydrogenase-N, Fe-S (beta) subunit, nitrate-inducible fdnI 1560121 - 1560774 + | formate dehydrogenase-N, cytochrome B556 (gamma) subunit, nitrate-inducible TERM 2151 1560819 - 1560800 - T 70 -6.4 -4.19238 | opp_overlap 1560800 GCTTTAAGCTGAAAA TGGCGC TGTAAAAG GCGCCA TTTTTTTATTGTAGA TERM 2152 1560800 - 1560819 + T 100 -7.1 -5.88565 | opp_overlap 1560800 GCTTTAAGCTGAAAA TGGCGCT GTAAAA GGCGCCA TTTTTTTATTGTAGA TERM 2153 1560978 - 1560997 + T 100 -6.4 -5.8187 | GTCATCAGTTTCAAA TGGCGCTT TATA AGGTGCCA TTTTTTTATTGCGTA ECS88_1571 1561565 - 1561287 - | conserved hypothetical protein, putative plasmid maintenance system killer protein adhP 1562761 - 1561751 - | alcohol dehydrogenase, 1-propanol preferring TERM 2154 1562890 - 1562863 - R 77 -7.6 -4.37534 | opp_overlap 1562873, overlap 1562864 1562865 AAAGGGAGAGGAAAA TTGCCCGGTAGC CTTC ACTACCGGGCGC AGGCTTAGATGGAGG TERM 2155 1562889 - 1562864 - R 78 -11.1 -3.21436 | opp_overlap 1562873, overlap 1562863 1562865 AAGGGAGAGGAAAAT TGCCCGGTAGC CTTC ACTACCGGGCG CAGGCTTAGATGGAG TERM 2156 1562888 - 1562865 - R 89 -14.6 -2.52138 | opp_overlap 1562873, overlap 1562864 1562863 AGGGAGAGGAAAATT GCCCGGTAGC CTTC ACTACCGGGC GCAGGCTTAGATGGA sfcA 1564592 - 1562895 - | malate dehydrogenase, (decarboxylating, NAD-requiring) (malic enzyme) TERM 2157 1563809 - 1563837 + g 100 -6.8 -5.60993 | gap 1, overlap 1563831 AAGAACAAATTTCAT TGCGATAGCGGTT AAGT AACGGC-ATCGCA TTTTTTTGTGCGAAG TERM 2158 1564694 - 1564715 + r 100 -13.1 -3.82031 | opp_overlap 1564694 AGATAAAAACAAAAA CACCATTGC GCAG GCAATGGTG TTTAATCGTCATTGA TERM 2159 1564715 - 1564694 - R 100 -13.1 -5.71295 | opp_overlap 1564694 AGATAAAAACAAAAA CACCATTGC GCAG GCAATGGTG TTTAATCGTCATTGA bdm 1565202 - 1564987 - | biofilm-dependent modulation protein osmC 1565547 - 1565978 + | osmotically inducible, stress-inducible membrane protein TERM 2160 1566154 - 1566141 - T 100 -9.5 -5.28942 | CACGTTAAATAAAAA CCCGC GAGT GCGGG CGAGAGGAATTTATC dos 1568567 - 1566168 - | cAMP phosphodiesterase, heme-regulated TERM 2161 1568544 - 1568531 - G 90 -4.5 -5.40072 | GGGCGGGGAAAAAAA TGCCA TCGG CGGCA GTATCCGCATCGGTT yddV 1568810 - 1568592 - | putative diguanylate cyclase YddV (partial) yddW 1570453 - 1569134 - | putative lipoprotein TERM 2162 1570536 - 1570558 + r 100 -14.2 -3.75378 | opp_overlap 1570536 AACAAGCACGAAAAA GGGAGCGATG AAT TATCGCTCCC TTGTCTTATAACCAT TERM 2163 1570558 - 1570536 - R 100 -13.5 -4.83593 | opp_overlap 1570536 AACAAGCACGAAAAA GGGAGCGAT GAATT ATCGCTCCC TTGTCTTATAACCAT gadC 1572119 - 1570584 - | glutamate:gamma-aminobutyric acid antiporter TERM 2164 1571138 - 1571151 + g 71 -3.1 -4.8667 | gap 1, opp_overlap 1571136, overlap 1571136 1571138 TCATTTTAGCGAATG CC-GCT GGC AGCAGG TTTTTCTGCGCTGTG TERM 2165 1571986 - 1571969 - G 75 -5.5 -4.67256 | GAATAAACCATAAAA TCCCGCC TAAT AGCAGGA AGAAGACTAATGAAA TERM 2166 1572161 - 1572189 + r 77 -7.6 -4.30416 | overlap 1572163 TCGGAACCGCACCTG TTTTGTTCTGAA GCGTA TTCAGAACAATA TTTTCCGTTGCTAAT TERM 2167 1572163 - 1572187 + r 80 -10.2 -3.75051 | overlap 1572161 GGAACCGCACCTGTT TTGTTCTGAA GCGTA TTCAGAACAA TATTTTCCGTTGCTA TERM 2168 1572256 - 1572227 - R 100 -15.1 -3.57387 | opp_overlap 1572231 1572233 1572254, overlap 1572228 AACAGACTTTGGAAA TTGTCCCGAAACG GCTT CGTTTCGGGACAC CGTTACCGTTAAACG TERM 2169 1572255 - 1572228 - R 100 -18.6 -2.7395 | opp_overlap 1572231 1572233 1572254, overlap 1572227 ACAGACTTTGGAAAT TGTCCCGAAACG GCTT CGTTTCGGGACA CCGTTACCGTTAAAC gadB 1573675 - 1572275 - | glutamate decarboxylase B, PLP-dependent TERM 2170 1574030 - 1574004 - R 89 -10.1 -4.4727 | opp_overlap 1574004 1574002 1573999 1573996, overlap 1574005 CGAATATTGATAAAA TCCCCGCCAAC GATGT GTTGACGGGGC TGTGATTATTTTGGC TERM 2171 1574029 - 1574005 - R 93 -13.6 -3.27639 | opp_overlap 1574004 1574002 1573999 1573996, overlap 1574004 GAATATTGATAAAAT CCCCGCCAAC GATGT GTTGACGGGG CTGTGATTATTTTGG pqqL 1576831 - 1574036 - | putative membrane-associated peptidase TERM 2172 1574546 - 1574567 + g 74 -2.3 -5.093 | gap 1, opp_overlap 1574551, overlap 1574551 ATAACGCTTCCACTG TGAAACCTGT GCC ACTGGTT-CA TTTTGTTCTTTTACA TERM 2173 1574864 - 1574883 + g 74 -7.8 -4.08767 | overlap 1574876 1574877 CTGGGCGAATTTCTC CGCTGGAC GCTG GTCGAGCG TTTTCAACGCCTGAA TERM 2174 1576284 - 1576306 + g 81 -11.2 -3.62572 | opp_overlap 1576282 1576281, overlap 1576285 GCCAGCAGGAAAGGG CGGCGCGCCT GAG AGGTGCGCCA TTTCGCATCCTGATG TERM 2175 1576285 - 1576305 + g 90 -14.7 -2.77222 | opp_overlap 1576282 1576281, overlap 1576284 CCAGCAGGAAAGGGC GGCGCGCCT GAG AGGTGCGCC ATTTCGCATCCTGAT yddB 1579248 - 1576876 - | putative porin protein TERM 2176 1576916 - 1576937 + g 76 -10.9 -3.32023 | gap 1, opp_overlap 1576910 1576907, overlap 1576914 CAGAAAGTACGGCCA CTGGCGTAGG TCG CC-ACGCCAG TATTCGTTGTATCAA TERM 2177 1577497 - 1577513 + g 78 -7.9 -4.39989 | GGTGGTTTTAGTCGC GCTGTCG GTA CGACTGC TTTTGCTGATTTGAT yddA 1580971 - 1579286 - | putative multidrug transporter fused subunits of ABC superfamily transporter: permease component; ATP-binding component TERM 2178 1580742 - 1580720 - G 76 -7.6 -4.2586 | GGATATTAATACAAA GATCCCCAGC AGG GCAGGGAACC AAAGGACAAGCTGCC TERM 2179 1581208 - 1581183 - R 82 -10.5 -3.95424 | opp_overlap 1581182 1581181 1581185 ATGATGAAGACGAAA CACCCGACA GGAATTTA TGTCGGGTG CCTTGTTAAGGTCAT ydeM 1582419 - 1581262 - | hypothetical protein TERM 2180 1582459 - 1582438 - R 87 -11.5 -3.61715 | opp_overlap 1582432, overlap 1582439 TATCTCGCTCAATAA GGCGGCGGA AAAA TCCGCCGCA TGAAGGTTAAGTTAT TERM 2181 1582458 - 1582439 - R 89 -15 -2.76815 | opp_overlap 1582432, overlap 1582438 ATCTCGCTCAATAAG GCGGCGGA AAAA TCCGCCGC ATGAAGGTTAAGTTA ydeN 1584153 - 1582471 - | putative sulfatase TERM 2182 1584486 - 1584506 + r 71 -9.7 -3.04089 | opp_overlap 1584485 1584484, overlap 1584485 GCCTAAAAACAACGC GGGGCAG GGAATGG CTGCCCC ATTTAATTCTTACGC ydeO 1585316 - 1584555 - | putative DNA-binding transcriptional activator, AraC-type ECS88_1588 1585588 - 1585391 - | hypothetical protein TERM 2183 1585822 - 1585792 - R 90 -12.8 -3.28537 | opp_overlap 1585786 ATAGTCAATGAGGAA TTCTTCTGCTGT GCGGATG ACAGCAGAAGAA ATGAGGAGGCGAATT ydeP 1588115 - 1585836 - | putative oxidoreductase; putative molybdoenzyme TERM 2184 1589202 - 1589233 + r 79 -9.4 -3.85165 | gap 1, overlap 1589203 CATTGGTGAATTTCT C-GGGTGTGCGTAGC CAT GCCACACACACCCTG TTTCAATTTCAGATG TERM 2185 1589203 - 1589231 + r 100 -13.1 -3.50832 | overlap 1589202 ATTGGTGAATTTCTC GGGTGTGCGTAGC CAT GCCACACACACCC TGTTTCAATTTCAGA ECS88_1591 1589884 - 1589273 - | putative major fimbrial subunit FmlA TERM 2186 1589927 - 1589913 - R 77 -7.2 -4.37886 | opp_overlap 1589912 TTATTGCTTATAAAA CAAGAA TCA TTCTTG ATTGGATGTTGCCCT ECS88_1592 1590486 - 1590199 - | conserved hypothetical protein, putative NAD(P)-binding Rossmann-fold domain TERM 2187 1590295 - 1590285 - G 70 -4 -4.62336 | opp_overlap 1590285 AGCCGAGTGTAAAAA TGAT GGC ATCA ATATCTTTCGGTAAA ECS88_1593 1590596 - 1590853 + | hypothetical protein hipA 1592434 - 1591112 - | regulator with hipB hipB 1592700 - 1592434 - | DNA-binding transcriptional regulator TERM 2188 1592461 - 1592476 + g 83 -5.4 -5.09225 | ATCTTGCTGTTCTGT TGCTTC TGGC GAGGCA TTTTTTGCGTCGCAT tam 1593008 - 1593766 + | trans-aconitate methyltransferase yneE 1594684 - 1593770 - | conserved hypothetical protein; putative inner membrane protein TERM 2189 1594502 - 1594489 - G 79 -2.3 -5.28166 | GAAAACCAAGAAAAA TGGCG ATGG CGACA CCGAGAATGCTGAAC TERM 2190 1594818 - 1594769 - R 95 -13.1 -3.41454 | opp_overlap 1594783, overlap 1594777 1594783 ACAAATTACCTACAA GCTTACAACATTAACAGGTGC TGCATGTG GCACCTGTTAATGATAAAAGC ACATAGAATGTTGTA TERM 2191 1594810 - 1594777 - R 100 -14.1 -3.38291 | opp_overlap 1594783, overlap 1594769 1594783 CCTACAAGCTTACAA CATTAACAGGTGC TGCATGTG GCACCTGTTAATG ATAAAAGCACATAGA TERM 2192 1594871 - 1594856 - R 89 -10.4 -4.58585 | TAGCGAAATAAGAAA CCCGGT CGAA ACCGGG TTCAGAGTATTAGCA uxaB 1596332 - 1594881 - | altronate oxidoreductase, NAD-dependent yneF 1597977 - 1596559 - | putative membrane-associated diguanylate cyclase (GGDEF domain) TERM 2193 1597260 - 1597223 - G 81 -12.1 -3.14404 | ATATCAATCACCGAA TTTGCCACCAGTACGAC TTCC ACCGCACCGGTGACAAA GGTCAACAGACATGT TERM 2194 1597918 - 1597908 - G 80 -5.4 -4.91109 | opp_overlap 1597908 TGGTTAGCACAAAAA TAGC GAT GCTA TTACGTAGCAGATGA yneG 1598475 - 1598116 - | hypothetical protein TERM 2195 1598249 - 1598231 - G 82 -11.7 -3.524 | opp_overlap 1598226 CACTTAGCCAGACAA CCGCGAC AACAG GTCGCGG TGGCGTGTTGAGCGA yneH 1599401 - 1598475 - | putative glutaminase TERM 2196 1599416 - 1599440 + r 75 -10.8 -2.87931 | gap 1 CTTTCTACTCCTGGA C-CGCAGGTCT GAAA AGACCTGCGAG TATATCAGAGCTGAA yneI 1600853 - 1599465 - | putative aldehyde dehydrogenase TERM 2197 1599865 - 1599877 + g 77 -3.3 -5.03715 | opp_overlap 1599860 1599859, overlap 1599858 AGTAACAAACGCGCA CCCTG CGC CAGTG TTTTTTCCACCTGAT TERM 2198 1601329 - 1601351 + G 85 -14.2 -2.78384 | TCACTTTCCACCGGC CCTTCCGGCA CTA TGCTGGAAGG TGTGCTGGAGGGAAA yneJ 1600954 - 1601835 + | putative DNA-binding transcriptional regulator TERM 2199 1602350 - 1602373 + G 70 -3.8 -4.70583 | GACAATTTATGCATG GGTAGTGGCG CTAA TGTCATTGCC TTTTATGTTAATGAC ydeA 1602174 - 1603364 + | wide-spectrum sugar (arabinose, isopropyl-beta-D-galactoside) exporter; MFS superfamily TERM 2200 1603371 - 1603384 + T 100 -9.5 -5.1861 | opp_overlap 1603371 ACACAATAGTCGAAA GGCCC ATTC GGGCC TTTTTTAATGATACG TERM 2201 1603384 - 1603371 - T 77 -9.5 -3.68662 | opp_overlap 1603371 ACACAATAGTCGAAA GGCCC ATTC GGGCC TTTTTTAATGATACG marC 1604054 - 1603389 - | putative wide-spectrum exporter marR 1604266 - 1604700 + | DNA-binding transcriptional repressor of multiple antibiotic resistance marA 1604721 - 1605104 + | DNA-binding transcriptional dual activator of multiple antibiotic resistance TERM 2202 1605240 - 1605273 + G 77 -8.9 -4.08485 | gap 1, overlap 1605240 TTCCTGTGGCAATGT C-GTGGTTGTTCCCAC ATC GCAGGAACAACCACCG TTTGATTTAAATCAC marB 1605136 - 1605354 + | conserved hypothetical protein associated with multiple antibiotic resistance operon TERM 2203 1605359 - 1605386 + T 100 -18.6 -3.71265 | opp_overlap 1605346 ACGCTATGTAGTTAT TGTCAGGCTCTG ATCA CAGAGCCTGACA TTTCCGTAATATCTT ECS88_1609 1606880 - 1605411 - | putative 6-phospho-beta-glucosidase TERM 2204 1606204 - 1606225 + g 85 -10.3 -4.1711 | opp_overlap 1606204 1606207, overlap 1606207 CTGGCAACTAACTCA TAATGTACC GCCT GGTACATTA TTTGTTCGCGCTCAT TERM 2205 1606207 - 1606222 + g 76 -7.6 -4.20768 | opp_overlap 1606207 1606204, overlap 1606204 GCAACTAACTCATAA TGTACC GCCT GGTACA TTATTTGTTCGCGCT ECS88_1610 1608547 - 1606874 - | putative carbohydrate-specific outer membrane porin ECS88_1611 1608916 - 1608602 - | putative phosphotransferase system PTS, lactose/cellobiose-specific IIA subunit ECS88_1612 1610302 - 1608941 - | putative phosphotransferase system IIC component TERM 2206 1609689 - 1609679 - G 82 -2.6 -5.32882 | CACCATGACAAAAAA TATT GGC AATA AAACTTTAAATGAAC ECS88_1613 1610689 - 1610378 - | putative cellobiose-specific phosphotransferase enzyme IIB component TERM 2207 1610802 - 1610790 - H 73 -6.3 -4.329 | overlap 1610792 TAATACAGCAATAAA GTTGT TCA ACAAC AGGGTGATAATTAAA ECS88_1614 1610888 - 1611586 + | putative DNA-binding transcriptional regulator HTH family TERM 2208 1611589 - 1611629 + T 72 -8.4 -3.63805 | gap 1, opp_overlap 1611589 1611590, overlap 1611590 1611594 TTTTCCGCGATAAAA GCAGACGCACAGAGTGCTG GCAT CA-CATTCTGTGCGTATGG TTTAGCCTCTGACCT TERM 2209 1611629 - 1611589 - T 73 -6.2 -4.36914 | gap 1, opp_overlap 1611589 1611590 1611594, overlap 1611590 TTTTCCGCGATAAAA GCAGACGCACAGAGTGCTG GCAT CA-CATTCTGTGCGTATGG TTTAGCCTCTGACCT TERM 2210 1611590 - 1611628 + T 79 -11.9 -2.77962 | gap 1, opp_overlap 1611589 1611590, overlap 1611589 1611594 TTTCCGCGATAAAAG CAGACGCACAGAGTGCTG GCAT CA-CATTCTGTGCGTATG GTTTAGCCTCTGACC TERM 2211 1611628 - 1611590 - T 72 -9.7 -3.21934 | gap 1, opp_overlap 1611590 1611589 1611594, overlap 1611589 TTTCCGCGATAAAAG CAGACGCACAGAGTGCTG GCAT CA-CATTCTGTGCGTATG GTTTAGCCTCTGACC TERM 2212 1611594 - 1611624 + T 79 -11.3 -3.01765 | gap 1, opp_overlap 1611590 1611589, overlap 1611590 1611589 CGCGATAAAAGCAGA CGCACAGAGTGCTG GCAT CA-CATTCTGTGCG TATGGTTTAGCCTCT eamA 1612530 - 1611631 - | cysteine and O-acetyl-L-serine efflux system TERM 2213 1612006 - 1612039 + g 77 -3.1 -5.07486 | gap 1, opp_overlap 1612011, overlap 1612008 1612012 CCAGATTACCAGCGA CATCACTGCCGGACGC GTT GCGTGCGACA-TGATC TTTTTATTGAAGATG TERM 2214 1612172 - 1612161 - G 77 -5.8 -4.63527 | opp_overlap 1612167 CCAGTACGCCAAAAA TCGC TAAG GCGA TCCCCGCCAATTGTT TERM 2215 1612228 - 1612216 - G 70 -6.9 -4.08485 | TTCACCGAAAGTAAA CGCGC CAA GCACG ATAGTAAAAAACGCT TERM 2216 1612262 - 1612240 - G 79 -2.6 -5.23316 | CACGATAGTAAAAAA CGCTTGTGCC TGT AACACCAACG AGGCCAGTCCAGCAG ydeE 1612725 - 1613912 + | putative transporter TERM 2217 1613888 - 1613904 + T 70 -5.7 -4.40298 | overlap 1613887 AATTCGTGCAAGACC GTGGGGG CAG CCCGCGC TTTGTTGATTTAAGT TERM 2218 1614159 - 1614195 + T 91 -10.2 -4.82901 | gap 1, opp_overlap 1614160, overlap 1614160 1614162 ATAATCCCTCACCTA ACCGGCCCCTTGTTACA GTTG TGTA-CAAGGGGCCTGA TTTTTATGACGGCGA TERM 2219 1614194 - 1614160 - T 87 -13.7 -3.06133 | gap 1, opp_overlap 1614159 1614160 1614162 TAATCCCTCACCTAA CCGGCCCCTTGTTACA GTTG TGTA-CAAGGGGCCTG ATTTTTATGACGGCG TERM 2220 1614160 - 1614194 + T 100 -13.7 -3.49419 | gap 1, opp_overlap 1614160, overlap 1614159 1614162 TAATCCCTCACCTAA CCGGCCCCTTGTTACA GTTG TGTA-CAAGGGGCCTG ATTTTTATGACGGCG TERM 2221 1614162 - 1614192 + T 100 -14.9 -3.31915 | gap 1, opp_overlap 1614160, overlap 1614160 1614159 ATCCCTCACCTAACC GGCCCCTTGTTACA GTTG TGTA-CAAGGGGCC TGATTTTTATGACGG TERM 2222 1614235 - 1614218 - T 100 -10.5 -5.76949 | GACGGCGAAAAAAAA CCGCCAG TAAA CCGGCGG TGAATGCTTGCATGG ydeH 1615243 - 1614353 - | hypothetical protein TERM 2223 1615489 - 1615454 - R 70 -9.1 -3.26188 | opp_overlap 1615454 1615457, overlap 1615450 1615457 AATAGCATAACCCAA TAACCTAATGGCCCA GTAGTT CAGGCCATCAGGCTA ATTTATTTTTATTTC TERM 2224 1615486 - 1615457 - R 75 -8.6 -3.76168 | opp_overlap 1615454 1615457, overlap 1615450 1615454 AGCATAACCCAATAA CCTAATGGCCCA GTAGTT CAGGCCATCAGG CTAATTTATTTTTAT TERM 2225 1615709 - 1615740 + r 77 -9.4 -3.60035 | opp_overlap 1615707 1615710, overlap 1615706 1615702 1615710 1615735 ATTACTGCTATAACG AGGCTGGTCTGG CGATAAAT CCAGGCCAGCCA TTGGTTGTGTTTATA TERM 2226 1615739 - 1615710 - R 74 -10.7 -2.83271 | opp_overlap 1615709 1615706 1615702 1615710 1615735, overlap 1615707 TTACTGCTATAACGA GGCTGGTCTGG CGATAAAT CCAGGCCAGCC ATTGGTTGTGTTTAT TERM 2227 1615710 - 1615739 + r 85 -12.9 -2.74937 | opp_overlap 1615710 1615707, overlap 1615709 1615706 1615702 1615735 TTACTGCTATAACGA GGCTGGTCTGG CGATAAAT CCAGGCCAGCC ATTGGTTGTGTTTAT dcp 1617796 - 1615751 - | dipeptidyl carboxypeptidase II ydfG 1617933 - 1618679 + | L-allo-threonine dehydrogenase, NAD(P)-binding TERM 2228 1618688 - 1618705 + F 80 -10.5 -3.8591 | TCAGTAATTTTTATA CCCGGCG TAAC TGCCGGG TTATTGCTTGTCACA ydfH 1618768 - 1619454 + | putative DNA-binding transcriptional regulator TERM 2229 1619463 - 1619486 + F 100 -13.2 -3.63922 | overlap 1619461 1619475 AGAGTAATTCATTTC CTCTCATCCC ATCC GGGGTGAGAG TCTTTTCCCCCGACT ydfZ 1619631 - 1619834 + | putative selenium carrying protein TERM 2230 1619841 - 1619864 + T 100 -11.8 -5.63103 | gap 1, overlap 1619844 ATGAACTAAGCGTGT G-AATGCCGCC GAT GGCGGCATTGC TTTTTTTACTTCACG TERM 2231 1619844 - 1619860 + T 100 -13.7 -4.07651 | overlap 1619841 AACTAAGCGTGTGAA TGCCGCC GAT GGCGGCA TTGCTTTTTTTACTT ydfI 1621330 - 1619870 - | putative mannonate dehydrogenase TERM 2232 1621410 - 1621387 - R 83 -6 -5.16841 | TTATATGAATAAAAA TCCCCTCTCC GGTA AGAGAAGAGA TTGAGGATTTACAGA ynfP 1621773 - 1621681 - | hypothetical protein rspB 1622850 - 1621831 - | putative oxidoreductase, Zn-dependent and NAD(P)-binding rspA 1624076 - 1622862 - | putative enolase/dehydratase TERM 2233 1623183 - 1623172 - G 74 -5.8 -4.44548 | TACAGCGAAGCAAAA TCGG CAAT CCGA CGCATACCGGTAATT TERM 2234 1624196 - 1624181 - R 100 -4.6 -5.67063 | GTGATCACAAAAAAA GGCGTA TATT TGCGCC GTGAATGGTTGACAA ynfA 1624608 - 1624282 - | conserved hypothetical protein; putative inner membrane protein ynfB 1624743 - 1625084 + | hypothetical protein speG 1625119 - 1625679 + | spermidine N1-acetyltransferase ynfC 1626392 - 1625682 - | hypothetical protein ynfD 1626500 - 1626805 + | hypothetical protein TERM 2235 1626844 - 1626822 - f 81 -12 -3.08642 | opp_overlap 1626821 1626822 ACATTATCGACTGAA CGCCGGATAC GAC ACATCCGGCG ATTTGAACATACAAC TERM 2236 1626822 - 1626844 + F 74 -10.6 -2.74144 | opp_overlap 1626822, overlap 1626821 ACATTATCGACTGAA CGCCGGAT ACGACAC ATCCGGCG ATTTGAACATACAAC TERM 2237 1628032 - 1628019 - g 74 -5.9 -4.47328 | overlap 1628021 AAGGCGATGATAAAA CAGCG AAAA CGCCG CAGTGGGCTTCGCAA TERM 2238 1628852 - 1628826 - g 100 -3.1 -5.96521 | gap 1 ACGAATTAAAAAAAA TGGGTATCTATA AGCG TAAAGAT-CCCA ATGGTCATTTTGTCG ynfE 1627004 - 1629430 + | oxidoreductase subunit TERM 2239 1630868 - 1630885 + G 76 -4.1 -4.93296 | opp_overlap 1630862 1630868 CGTGGAAAAGAAAAA CTGGATG TCCC CATCAAG TTTTTATGGTGCTAC TERM 2240 1630885 - 1630868 - g 86 -4.1 -5.45802 | opp_overlap 1630868, overlap 1630862 CGTGGAAAAGAAAAA CTGGATG TCCC CATCAAG TTTTTATGGTGCTAC TERM 2241 1631362 - 1631330 - g 85 -2.8 -5.45652 | overlap 1631310 ATCTTTAAGAAAAAA TGCCCGGAAGAAC-AC TAC GTCGCT-TTCCGCGCA TTCCGTGTAGATCCA TERM 2242 1631483 - 1631468 - g 86 -6.2 -5.15969 | opp_overlap 1631467 1631470 TGGGAATTGAAAAAA GATGAA ATTA TTCATC CTCTTCCAGCTTATA ynfF 1629491 - 1631914 + | oxidoreductase subunit ynfG 1631925 - 1632542 + | oxidoreductase, Fe-S subunit ynfH 1632544 - 1633398 + | oxidoreductase, membrane subunit TERM 2243 1633405 - 1633424 + F 75 -9.2 -3.6106 | opp_overlap 1633404 1633403, overlap 1633406 GCAGGTTAACAAATT GGTGCGGG GCAA CCCGCACA TTTCAGGATGTTAGG TERM 2244 1633406 - 1633423 + F 82 -12.7 -2.76315 | opp_overlap 1633404 1633403, overlap 1633405 CAGGTTAACAAATTG GTGCGGG GCAA CCCGCAC ATTTCAGGATGTTAG TERM 2245 1633478 - 1633500 + G 95 -9.8 -4.65916 | overlap 1633476 ATAATTTTTCTGTCG CGGCGCGC GTGTTGG GCGCGCTG TTTTATTACGCTCCA TERM 2246 1633516 - 1633537 + G 70 -10.9 -2.74012 | gap 1, opp_overlap 1633520, overlap 1633519 TTTTATTACGCTCCA GAGAGTGCGG AAG CCGCAC-CTC TGGTTGCGGTACTCA TERM 2247 1633534 - 1633520 - g 75 -11.4 -2.8805 | opp_overlap 1633519 1633516 ATTACGCTCCAGAGA GTGCGG AAG CCGCAC CTCTGGTTGCGGTAC TERM 2248 1633591 - 1633616 + G 70 -6.9 -4.07568 | gap 1, opp_overlap 1633591 1633592, overlap 1633591 TGGCCTCTACCAGAA G-CGTCATTAGC GCC GCTGGTGACGGC TTTTCAGACACAGAG TERM 2249 1633910 - 1633922 + G 72 -4.8 -4.70613 | CATGGCACCTTTTTC CGTG GTCAA CACG TTTTCTTGACGTTTT dmsD 1633441 - 1634055 + | twin-argninine leader-binding protein for DmsA and TorA TERM 2250 1634032 - 1634044 + F 71 -9.1 -3.41073 | overlap 1634031 CTGTTGATTCCTGTC GCGGT TAA ACCGC TGTTTCGATAGGATC TERM 2251 1634420 - 1634446 + G 76 -7.9 -4.2704 | gap 1 GCGACGGCTGCTAAC CCCGGCGCTCGG CGGA CTG-GCGGCGGG TTTGTTGCTGATGGG TERM 2252 1635346 - 1635316 - g 77 -9.7 -3.64599 | opp_overlap 1635319, overlap 1635319 TGATGATATGTGAAA TGACCGGGGAGTA TCAGC TACTCCCCGGTTT ATTGATTGCCTGCGT TERM 2253 1635343 - 1635319 - g 95 -15.8 -2.93585 | opp_overlap 1635319, overlap 1635316 TGATATGTGAAATGA CCGGGGAGTA TCAGC TACTCCCCGG TTTATTGATTGCCTG TERM 2254 1635319 - 1635343 + G 100 -15.8 -4.33621 | opp_overlap 1635319 1635316 TGATATGTGAAATGA CCGGGGAGTA TCAGC TACTCCCCGG TTTATTGATTGCCTG clcB 1634253 - 1635434 + | putative voltage-gated chloride channel ynfK 1636082 - 1635387 - | putative synthase (similar to dethiobiotin synthetase) dgsA 1637427 - 1636207 - | DNA-binding transcriptional repressor TERM 2255 1636871 - 1636860 - G 72 -7.2 -4.19624 | opp_overlap 1636860 1636870 CATGCTGAATATAAA CCGG TACG CCGG TATGCTGCTCCAGCG TERM 2256 1636870 - 1636905 + g 72 -6.8 -4.21908 | gap 1, opp_overlap 1636860, overlap 1636860 1636874 ATAAACCGGTACGCC GGTATGCTGCTCCAGCG CCT CGCCG-AGCGGCATCTC TTTTACATCCTCGTA TERM 2257 1637165 - 1637139 - G 70 -4.4 -4.5287 | overlap 1637129 1637141 GCAAAGCAAGGAAAA TCTCCCCGCG ACTAATG CGCAGAGAAA GATAGTGCCAGGCTT ynfL 1638455 - 1637562 - | putative DNA-binding transcriptional regulator TERM 2258 1638398 - 1638373 - G 76 -11.1 -3.34398 | overlap 1638371 GGTGGTTGCGAAATA TTCAGGCGGGC AGCG GCACGCCCGAA ATGCAGCTCTTCTGC TERM 2259 1638668 - 1638682 + G 82 -7.8 -4.52589 | CGCCGCAATTTATGC GCGTCA CCC TGGCGC TTTTCTCTGCCGGAC TERM 2260 1639105 - 1639116 + G 74 -2.2 -5.08824 | overlap 1639101 CGCTTAATTAGCGGT GTCT TCAC GGAC TTTTTTAACTGGCGA ynfM 1638562 - 1639815 + | putative transporter; MFS type TERM 2261 1639856 - 1639821 - f 100 -12.1 -5.02074 | gap 2, opp_overlap 1639821 1639824 GCACGCCTGAAAAAA TAAGTCCGGACTGAGGT AAAT ACC-C-GTCCGGACTTA TTGCCTGCTCAAACC TERM 2262 1639821 - 1639856 + F 81 -12.1 -3.09516 | gap 2, opp_overlap 1639821, overlap 1639824 GCACGCCTGAAAAAA TAAGTCCGGACTGAGGT AAAT ACC-C-GTCCGGACTTA TTGCCTGCTCAAACC TERM 2263 1639824 - 1639853 + F 77 -9.4 -3.69395 | gap 2, opp_overlap 1639821, overlap 1639821 CGCCTGAAAAAATAA GTCCGGACTGAGGT AAAT ACC-C-GTCCGGAC TTATTGCCTGCTCAA TERM 2264 1640400 - 1640390 - g 72 -6.8 -4.17477 | overlap 1640391 1640393 AAAAAACAGCATAAA GCAG CAC CTGC CCAGAAAGCGCAGGC asr 1640240 - 1640548 + | acid shock-inducible periplasmic protein TERM 2265 1640592 - 1640624 + F 71 -8.4 -3.53444 | opp_overlap 1640591 1640594, overlap 1640593 CTCGCGCCTGAAAAT TACGGTGCTAAGCG GGTAA CGTTTAGCACCGCC TTTAGCGGAGGGTAG TERM 2266 1640593 - 1640623 + F 79 -11.9 -2.71924 | opp_overlap 1640591 1640594, overlap 1640592 TCGCGCCTGAAAATT ACGGTGCTAAGCG GGTAA CGTTTAGCACCGC CTTTAGCGGAGGGTA TERM 2267 1640622 - 1640594 - f 86 -13.2 -3.08032 | opp_overlap 1640593 1640592, overlap 1640591 CGCGCCTGAAAATTA CGGTGCTAAGCG GGTAA CGTTTAGCACCG CCTTTAGCGGAGGGT ydgD 1640824 - 1641645 + | putative exported metallopeptidase TERM 2268 1641686 - 1641646 - T 85 -9.1 -4.40561 | gap 1, opp_overlap 1641652 1641654, overlap 1641643 1641654 CTGTCGCAAAAATAA TGTTCAA-ACGCTGCCCG ACAGCG CGGGCAGCGTGTTCATCA GGCAAGTTTCACCAT TERM 2269 1641652 - 1641679 + T 86 -12.7 -3.14463 | opp_overlap 1641643 1641646 1641654, overlap 1641654 CAAAAATAATGTTCA AACGCTGCCCG ACAGCG CGGGCAGCGTG TTCATCAGGCAAGTT TERM 2270 1641677 - 1641654 - T 100 -15.3 -3.65722 | opp_overlap 1641652 1641654, overlap 1641643 1641646 AAAATAATGTTCAAA CGCTGCCCG ACAGCG CGGGCAGCG TGTTCATCAGGCAAG TERM 2271 1641654 - 1641677 + T 100 -15.3 -3.13403 | opp_overlap 1641654 1641643 1641646, overlap 1641652 AAAATAATGTTCAAA CGCTGCCCG ACAGCG CGGGCAGCG TGTTCATCAGGCAAG mdtI 1642013 - 1641684 - | multidrug efflux system transporter mdtJ 1642365 - 1642000 - | multidrug efflux system transporter TERM 2272 1642190 - 1642202 + g 90 -4.7 -5.40072 | opp_overlap 1642191, overlap 1642191 CACAGCGCATAAGCT ACGCC TAA GGCGA TTTTTTTAACGGCGA TERM 2273 1642191 - 1642201 + g 72 -8.2 -3.83561 | opp_overlap 1642191, overlap 1642190 ACAGCGCATAAGCTA CGCC TAA GGCG ATTTTTTTAACGGCG TERM 2274 1642487 - 1642477 - H 72 -8.2 -3.92804 | overlap 1642478 GAAGAAAGGACTAAA GCGC GTT GCGC CAGTGCTGCTCACCT TERM 2275 1643645 - 1643660 + G 74 -3.2 -5.00765 | overlap 1643638 1643647 GCGTGGGCTGGGGCT TTCCAC ATTG GTGGTA TTTTTGTCGTTGATT ydgG 1642776 - 1643810 + | conserved hypothetical protein; putative inner membrane protein TERM 2276 1643834 - 1643805 - T 70 -6.3 -4.18488 | overlap 1643807 1643808 AGCGATCTCAATAAA GAGTGACGGCCTC CGCA GAGGCCGTCAGGG TTACAGAGCTTTCAG TERM 2277 1643832 - 1643807 - T 100 -13.3 -3.69068 | overlap 1643805 1643808 CGATCTCAATAAAGA GTGACGGCCTC CGCA GAGGCCGTCAG GGTTACAGAGCTTTC TERM 2278 1643831 - 1643808 - T 100 -16.8 -2.80958 | overlap 1643807 1643805 GATCTCAATAAAGAG TGACGGCCTC CGCA GAGGCCGTCA GGGTTACAGAGCTTT pntB 1645223 - 1643835 - | pyridine nucleotide transhydrogenase, beta subunit pntA 1646766 - 1645234 - | pyridine nucleotide transhydrogenase, alpha subunit TERM 2279 1648210 - 1648154 - g 70 -6 -4.15044 | gap 2, overlap 1648165 1648205 CGTGCCGCGAAGAAA GGTGCTAAGTATTACCACATCACCCGCC AGT GGCAGG-AACGTGGTAATAACCTG-ACC GTCAGCGCAGATCTG TERM 2280 1648200 - 1648165 - g 73 -12 -2.72855 | gap 1, overlap 1648154 GAAAGGTGCTAAGTA TTACCACATCACCCGCC AGT GGCAGG-AACGTGGTAA TAACCTGACCGTCAG ydgH 1647290 - 1648234 + | hypothetical protein TERM 2281 1648255 - 1648271 + F 85 -10.8 -3.81062 | opp_overlap 1648255, overlap 1648247 CAGTTACTCCTATAA GGCGGC TTGAT GCCGCC TTTCGCATTTTTAGT TERM 2282 1648271 - 1648255 - f 80 -10.8 -3.31461 | opp_overlap 1648255 1648247 CAGTTACTCCTATAA GGCGGC TTGAT GCCGCC TTTCGCATTTTTAGT TERM 2283 1648833 - 1648845 + G 73 -4.1 -4.77036 | TGCATCGACTTTATT GTGGA TTG TTCAC TTTTTGATCCTGCGC TERM 2284 1649139 - 1649149 + G 70 -4.6 -4.51743 | GCTGGCGGTTCTCTC CGCT CTG GGCG TTTATTTGCTGGTAA ydgI 1648420 - 1649802 + | putative arginine/ornithine antiporter transporter TERM 2285 1650080 - 1650062 - g 75 -4.5 -4.81685 | opp_overlap 1650062, overlap 1650052 ATGAAGTACTAAAAA GCACCCA TGGTC TGCGTGC TATTTTGCATAACGC TERM 2286 1650475 - 1650495 + G 76 -10.5 -3.34344 | opp_overlap 1650475, overlap 1650479 CCTGGCGAGAAAGAA GTGATCGAC CTG GTCGATTAC TTACTTACCAGCTGC TERM 2287 1650495 - 1650475 - g 77 -8.3 -4.06419 | opp_overlap 1650475 1650479 CCTGGCGAGAAAGAA GTGATCGAC CTG GTCGATTAC TTACTTACCAGCTGC folM 1649839 - 1650561 + | dihydrofolate reductase isozyme ydgC 1650893 - 1650558 - | conserved hypothetical protein; putative inner membrane protein associated with alginate biosynthesis rstA 1651013 - 1651741 + | DNA-binding response regulator in two-component regulatory system with RstB rstB 1651745 - 1653046 + | sensory histidine kinase in two-component regulatory system with RstA tus 1653122 - 1654051 + | inhibitor of replication at Ter, DNA-binding protein fumC 1655451 - 1654048 - | fumarate hydratase (fumarase C),aerobic Class II TERM 2288 1654568 - 1654537 - G 76 -12.2 -2.50443 | gap 1, opp_overlap 1654536, overlap 1654536 TGAGATTTCACCAAT TCCGCAGCGCGGGCC AGA GGCCAGC-CAGCGGA CATCATTGGCAATTT TERM 2289 1655571 - 1655588 + r 71 -8.3 -3.48884 | opp_overlap 1655572, overlap 1655569 1655567 1655572 GTGCCATGTAAAAAA ACCGCCC CGAA GGGCGGC TCTGTTTATTTCACA TERM 2290 1655572 - 1655587 + r 79 -11.8 -2.68607 | opp_overlap 1655572, overlap 1655571 1655569 1655567 TGCCATGTAAAAAAA CCGCCC CGAA GGGCGG CTCTGTTTATTTCAC TERM 2291 1655587 - 1655572 - R 100 -11.8 -5.47218 | opp_overlap 1655571 1655569 1655567 1655572 TGCCATGTAAAAAAA CCGCCC CGAA GGGCGG CTCTGTTTATTTCAC fumA 1657240 - 1655594 - | fumarate hydratase (fumarase A), aerobic Class I TERM 2292 1656214 - 1656229 + g 72 -4.7 -4.66163 | CCGGGATATATTTGC CTGGA TTATGT TCCAG TTTTTCGATCCAGAT TERM 2293 1657092 - 1657064 - G 72 -7.4 -3.97947 | overlap 1657079 CGGACGCAGCATAAA TGACGCATCATG AAACG CCTGACGCGCCA ACAGAGTTAACGCTT TERM 2294 1657174 - 1657192 + g 74 -2.4 -5.08824 | GTTCGCTGGTTAGCA GGTAATAC TCA GTATCATC TTTTTTGAGTGGAAA manA 1657439 - 1658614 + | mannose-6-phosphate isomerase TERM 2295 1658672 - 1658692 + F 100 -12.6 -4.27483 | opp_overlap 1658667 1658670 1658669 AGGCTTATAACACCT TCAGGCGG CCAGT CCGCCTGA TTTCATTTTATGGAT TERM 2296 1659242 - 1659225 - g 73 -4 -4.86773 | overlap 1659226 1659227 CAAAAGGATGAAAAA GTCGCC TTTAGC GGCGGC GAGTTCCAGTTAAAT TERM 2297 1659891 - 1659873 - g 74 -8.1 -4.04927 | gap 1 GCAACGACTAAAGAA GCGCC-GC AAAC GCTGGCGC AGGAAGTGGACCGCT ydgA 1658715 - 1660223 + | hypothetical protein TERM 2298 1660237 - 1660260 + T 100 -13.9 -5.5604 | opp_overlap 1660237 AATTCACAGCCAAAA CGCCGGAGA TTTTTC TCTCCGGCG TTTTTTCTTACTTCA TERM 2299 1660260 - 1660237 - T 100 -13.9 -4.24606 | opp_overlap 1660237 AATTCACAGCCAAAA CGCCGGAGA TTTTTC TCTCCGGCG TTTTTTCTTACTTCA uidC 1661533 - 1660268 - | outer membrane porin protein for glucuronides transport uidB 1662945 - 1661572 - | glucuronide transporter TERM 2300 1662491 - 1662525 + g 88 -12.1 -3.69395 | gap 1, opp_overlap 1662482 1662483, overlap 1662486 1662497 AATGAAGCGGCAATC CCGCGAGC-CGCGCCC AGAC GGGCGCGGGATTGTGG TTGTTGGGTCATCGC TERM 2301 1662497 - 1662518 + g 81 -12.9 -2.76171 | opp_overlap 1662483, overlap 1662486 1662491 GCGGCAATCCCGCGA GCCGCGCCC AGAC GGGCGCGGG ATTGTGGTTGTTGGG uidA 1664753 - 1662942 - | beta-D-glucuronidase TERM 2302 1663033 - 1663012 - G 70 -4.3 -4.46212 | opp_overlap 1663013, overlap 1663013 TTTTGCAGCAGAAAA GCCGCAGAC TTCG GTTTGCGGT CGCGAGTGAAGATCC TERM 2303 1663538 - 1663551 + g 73 -3.8 -4.82901 | opp_overlap 1663538, overlap 1663536 CAATACTCCACATCA CCAC GCTTGG GTGG TTTTTGTCACGCGCA TERM 2304 1664607 - 1664629 + g 72 -6.2 -4.30719 | opp_overlap 1664606 CTGATCGTTAAAACT GCCCGGCA CAGCAAT TGCCCGGC TTTCTTGTAACGCGC TERM 2305 1664815 - 1664829 + r 72 -8.6 -3.58726 | opp_overlap 1664814 ATTAGTTAACCAATT CTGTGT TGC ACACAG TTATCTGTGAGAAAC TERM 2306 1665127 - 1665101 - R 86 -10.9 -3.87318 | gap 1 AATTACGATATGAAA CGCGGGCTCAGT TGTC ACC-AGCCCGCG GAAAGAGAGAGAGGA uidR 1665733 - 1665143 - | DNA-binding transcriptional repressor TERM 2307 1665840 - 1665868 + r 95 -12.6 -3.65827 | gap 1, overlap 1665842 TTCGTAAGCTTTTTA TC-CGGCTATTGG TTAA CCAATAGCCGTGA TTTGGCTGCCAGTTG TERM 2308 1665842 - 1665865 + r 93 -15.4 -2.94144 | overlap 1665840 CGTAAGCTTTTTATC CGGCTATTGG TTAA CCAATAGCCG TGATTTGGCTGCCAG TERM 2309 1665919 - 1665949 + r 75 -9.8 -3.456 | opp_overlap 1665936 GTTGCACACGCTATC CCGGTAAACAAC ACATACG GCTGTTTACCGG TTCGTTAGTGTATTA hdhA 1666729 - 1665962 - | 7-alpha-hydroxysteroid dehydrogenase, NAD-dependent TERM 2310 1666779 - 1666763 - R 82 -5.1 -5.3104 | opp_overlap 1666772 TCAGTAAAAATAAAA GGCAC CGCCTGT GTGCC ACATTTTTTATCATT TERM 2311 1666772 - 1666782 + r 87 -5.4 -5.37345 | opp_overlap 1666763 ATAAAAGGCACCGCC TGTG TGC CACA TTTTTTATCATTAAC malI 1667869 - 1666841 - | DNA-binding transcriptional repressor TERM 2312 1668411 - 1668401 - g 72 -6.8 -4.24342 | TGGTTGACCAATAAA GGCA TTC TGCC AACCACGGACGCCGC malX 1668044 - 1669636 + | fused maltose and glucose-specific PTS enzymes: IIB and IIC components malY 1669646 - 1670818 + | bifunctional beta-cystathionase, PLP-dependent and regulator of maltose regulon TERM 2313 1670818 - 1670859 + F 89 -8.7 -4.652 | overlap 1670819 CCGCGCTGTTGGTTA ACCCCAATTGCGCAACG TAAAAAAT CGTTGCGCAATCGTGGA TTTTTACCCTGCTTT TERM 2314 1670819 - 1670858 + F 85 -12.2 -3.38036 | overlap 1670818 CGCGCTGTTGGTTAA CCCCAATTGCGCAACG TAAAAAAT CGTTGCGCAATCGTGG ATTTTTACCCTGCTT TERM 2315 1671199 - 1671179 - g 74 -11.1 -3.20387 | opp_overlap 1671178, overlap 1671177 TGAAAACATTGAAGA TGCAGCCCG TAA CGGCCTGCA CTATGTCGAGCTGCG TERM 2316 1671903 - 1671891 - g 75 -4.7 -4.80882 | AGCGCAGAGGAAAAA CGCGC ACT GCGAG AAAAAGTCGCCGCGA add 1670922 - 1671923 + | adenosine deaminase TERM 2317 1671930 - 1671954 + T 73 -10 -3.04398 | opp_overlap 1671930 1671931, overlap 1671929 GCGAAGTAACAAAAA TGGATGGTGC TAATT GCACCATCCC CTTTTCACGCAAGGC TERM 2318 1671954 - 1671930 - T 100 -10 -5.1963 | opp_overlap 1671930 1671929, overlap 1671931 GCGAAGTAACAAAAA TGGATGGTGC TAATT GCACCATCCC CTTTTCACGCAAGGC TERM 2319 1671953 - 1671931 - T 100 -13.5 -3.70694 | opp_overlap 1671930 1671929, overlap 1671930 CGAAGTAACAAAAAT GGATGGTGC TAATT GCACCATCC CCTTTTCACGCAAGG ydgJ 1672999 - 1671959 - | putative oxidoreductase blr 1673167 - 1673367 + | beta-lactam resistance membrane protein TERM 2320 1673388 - 1673410 + F 73 -6.3 -4.3208 | gap 1 GCACTTGTTGAGCGA CATGCTGCCC GTCC GGGT-GCATG TTTTCACTTGTCGGA ydgT 1673640 - 1673855 + | post-transcriptional regulator TERM 2321 1673979 - 1673998 + G 75 -7 -4.3014 | overlap 1673983 TATTGGAGGCTGGTT GCTTGGCC CGTT GGCCTGGC TTTTAGTCGCTCTGT ydgK 1673941 - 1674381 + | conserved hypothetical protein; putative inner membrane protein rsxA 1674458 - 1675039 + | putative inner membrane subunit of an electron transport system rsxB 1675039 - 1675617 + | putative iron-sulfur protein TERM 2322 1675658 - 1675642 - g 87 -4.5 -5.28176 | overlap 1675648 TGCATTCAGAAAAAA TAAAATC TGG GATTTCA ACGGCGGCATCCATC TERM 2323 1675707 - 1675734 + G 100 -12.7 -4.54821 | overlap 1675709 AGTCCAACGGTACGC CCCTGCGCCAG GTACCA CTGGCGCAGCG TTTTGTCATTCCACT TERM 2324 1675709 - 1675732 + G 84 -13.9 -2.5882 | overlap 1675707 TCCAACGGTACGCCC CTGCGCCAG GTACCA CTGGCGCAG CGTTTTGTCATTCCA TERM 2325 1676123 - 1676109 - g 72 -8.6 -3.80142 | GAGATAAGATTGAAA CGTTGA TTA TCAACG CTGCTGAGTGCGAGC rsxC 1675610 - 1677736 + | putative 4Fe-4S ferredoxin-type protein fused with unknown protein TERM 2326 1677831 - 1677847 + G 79 -2.2 -5.27477 | opp_overlap 1677831, overlap 1677832 CAGCCGTGCCAGGAA TCGCAG CGCAA CTGTGG TTTTTTGGTTGGGGT TERM 2327 1678618 - 1678637 + G 70 -6.4 -4.17048 | overlap 1678617 1678620 CCCGGTTACCGCTTC TACGACCA ATCG TGGTCGTC TTATTTTCGGCGCGC TERM 2328 1678620 - 1678635 + G 73 -9 -3.68435 | overlap 1678617 1678618 CGGTTACCGCTTCTA CGACCA ATCG TGGTCG TCTTATTTTCGGCGC rsxD 1677737 - 1678795 + | putative inner membrane oxidoreductase rsxG 1678799 - 1679419 + | putative oxidoreductase TERM 2329 1679813 - 1679789 - g 74 -3.4 -5.00616 | opp_overlap 1679789, overlap 1679790 TTCGCCGCCAAAAAA GGTCCGGCGC TTTCG GCACTGGACG GCTTTTCAATTGGTA TERM 2330 1679831 - 1679845 + G 72 -11.4 -2.50195 | overlap 1679830 1679827 1679832 TTTTCAATTGGTATG GGCGCA ACC TGCGCC ATGTTCGTGCTGGGT rsxE 1679423 - 1680118 + | putative inner membrane NADH-quinone reductase nth 1680118 - 1680753 + | DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III) TERM 2331 1681405 - 1681385 - g 76 -4 -4.99134 | opp_overlap 1681389 1681395, overlap 1681390 1681395 ACTGCAAACCAAAAA CCAACTGA AAGCG TCAGTTTG AACGCTTTTAAACAA TERM 2332 1681811 - 1681795 - g 76 -3.5 -4.91511 | opp_overlap 1681810 ATGCTATGAGAAAAA CGACCCG CGT CTGGACG GTGCATTCACCATGT ydgR 1681364 - 1682866 + | putative oligopeptide transporter TERM 2333 1682912 - 1682890 - f 100 -13.5 -3.30635 | opp_overlap 1682890 GAAACTCTTTTACAA GCCGCTAAC TTTTC GTTAGCGGC TTTTTTTTGTTCAGC TERM 2334 1682890 - 1682912 + F 100 -13.5 -6.09888 | opp_overlap 1682890 GAAACTCTTTTACAA GCCGCTAAC TTTTC GTTAGCGGC TTTTTTTTGTTCAGC TERM 2335 1683088 - 1683076 - g 84 -4.1 -5.28481 | GATTTAATGAAAAAA CGTCT CGA AAACG GTGACAATTACTTTG TERM 2336 1683261 - 1683251 - g 70 -5.4 -4.36914 | TTTCCCGCTATAAAA CCAT CGA ATGG CTGAATTACATCGCC gst 1682971 - 1683576 + | glutathionine S-transferase pdxY 1684483 - 1683620 - | pyridoxal kinase 2/pyridoxine kinase TERM 2337 1684331 - 1684308 - G 78 -11 -3.54638 | opp_overlap 1684307 1684303 1684300 ACAATTTCGGTTAAA TGGCTGGGTG GCAT CACACAGCCA GTCCATTTGCCGTAT TERM 2338 1684529 - 1684500 - R 95 -10.7 -4.82901 | opp_overlap 1684503, overlap 1684501 1684503 TTCCCTGTATAAAAA CCAGGGGGAGTGA TTTC TCACTCCCCCTTT CCACTTAATGCATTA TERM 2339 1684528 - 1684501 - R 100 -14.2 -3.49419 | opp_overlap 1684503, overlap 1684500 1684503 TCCCTGTATAAAAAC CAGGGGGAGTGA TTTC TCACTCCCCCTT TCCACTTAATGCATT TERM 2340 1684526 - 1684503 - R 100 -16.8 -3.31915 | opp_overlap 1684503, overlap 1684501 1684500 CCTGTATAAAAACCA GGGGGAGTGA TTTC TCACTCCCCC TTTCCACTTAATGCA TERM 2341 1684503 - 1684526 + r 100 -16.8 -3.67976 | opp_overlap 1684501 1684500 1684503 CCTGTATAAAAACCA GGGGGAGTGA TTTC TCACTCCCCC TTTCCACTTAATGCA tyrS 1685816 - 1684542 - | tyrosyl-tRNA synthetase TERM 2342 1684924 - 1684941 + g 84 -4.1 -5.21506 | gap 1, overlap 1684921 1684925 AGCACATACTGGGCG C-GCGGTG CTT TACCGCTG TTTTTATCTTCTTCT TERM 2343 1684925 - 1684939 + g 76 -7.8 -4.20977 | overlap 1684921 1684924 GCACATACTGGGCGC GCGGTG CTT TACCGC TGTTTTTATCTTCTT pdxH 1686601 - 1685945 - | pyridoxine 5'-phosphate oxidase TERM 2344 1686024 - 1685999 - G 73 -4 -4.83169 | gap 1 ACGCTGGTACAAAAA GCGGTCATGCA GGCGA TGC-TCACCGC CCTGCCAGAACTCAA TERM 2345 1686349 - 1686370 + g 81 -5.9 -4.78107 | gap 1, overlap 1686352 CTTTACGGCTGCCGA GGT-TGGTGT AAA ACACCATGCC TTTTTCGTCGTAATG TERM 2346 1686529 - 1686544 + g 72 -7.5 -3.93262 | overlap 1686541 CGGCGGGTAGATCGC GGCGG CGTAAC CCGCC TTTGGTGTATTCACG ydhA 1686989 - 1686660 - | putative lipoprotein anmK 1688196 - 1687087 - | anhydro-N-acetylmuramic acid kinase TERM 2347 1687213 - 1687251 + g 100 -16.8 -3.51924 | opp_overlap 1687227 CGCCAATGCTTCCAT GTCATCGCCACTAATGCC AAC GGCATCGGTGGTGGTGAC TTCTGTGCCTGGCAG slyB 1688470 - 1688937 + | putative outer membrane lipoprotein TERM 2348 1688939 - 1688981 + T 72 -8.5 -3.63968 | gap 1, opp_overlap 1688942, overlap 1688931 1688942 TTTCCCCGCGCTAAA T-AAGTTTGCGTGTGGTCAG GTTA CTGACCACACGCCCCCTTCA TTTCACCCTTTGGCC TERM 2349 1688977 - 1688942 - T 93 -11.8 -3.90744 | opp_overlap 1688939 1688931 1688942 CCCCGCGCTAAATAA GTTTGCGTGTGGTCAG GTTA CTGACCACACGCCCCC TTCATTTCACCCTTT TERM 2350 1688942 - 1688977 + T 88 -11.8 -3.5332 | opp_overlap 1688942, overlap 1688939 1688931 CCCCGCGCTAAATAA GTTTGCGTGTGGTCAG GTTA CTGACCACACGCCCCC TTCATTTCACCCTTT slyA 1689418 - 1688984 - | DNA-binding transcriptional activator ydhI 1689619 - 1689855 + | conserved hypothetical protein; putative inner membrane protein TERM 2351 1690524 - 1690510 - g 73 -4.2 -4.79955 | ATAGTGATAACAAAA CGTTAC AGG GTCACG TGTCCAGTATCGGTC ydhJ 1689858 - 1690715 + | undecaprenyl pyrophosphate phosphatase TERM 2352 1692634 - 1692655 + G 73 -11.5 -2.6914 | opp_overlap 1692633 1692632, overlap 1692633 1692635 CCGTCATCATCAACC TGCCGCCCG AGAA CTGGCGGCA ATTGTCTGGCGGCTG ydhK 1690715 - 1692727 + | conserved hypothetical protein; putative inner membrane protein sodC 1693249 - 1692728 - | superoxide dismutase, Cu, Zn TERM 2353 1692765 - 1692775 + g 72 -8.2 -3.78329 | opp_overlap 1692746, overlap 1692768 TAGCGTTCACCGCCA CCGC CCA GCGG TTTGGGTTGATCGGA ydhF 1694226 - 1693330 - | putative oxidoreductase ydhL 1694685 - 1694275 - | hypothetical protein ydhM 1694701 - 1695216 + | putative DNA-binding transcriptional regulator TERM 2354 1695203 - 1695222 + F 82 -4.9 -5.24129 | overlap 1695204 AAAACATTATTGCGA CGCCTGC CGTTTA GCAGGCA TTTTTTATCACCAGA TERM 2355 1695204 - 1695221 + F 75 -8.4 -3.73995 | overlap 1695203 AAACATTATTGCGAC GCCTGC CGTTTA GCAGGC ATTTTTTATCACCAG TERM 2356 1695478 - 1695454 - g 72 -7.2 -4.18018 | gap 1 TCTGCCCAGGCAAAA GGATACGCAGG TGCA CCTG-GCATCC ATAGCCCGGAACAAA nemA 1695253 - 1696350 + | N-ethylmaleimide reductase, FMN-linked TERM 2357 1696709 - 1696696 - g 71 -2.3 -5.01732 | overlap 1696697 AAGCGTGCGAAAAAA TCCGT CAAA ACGGG GGTAACGTAACCCGT gloA 1696431 - 1696838 + | glyoxalase I, Ni-dependent TERM 2358 1696844 - 1696871 + F 75 -9.9 -3.46647 | gap 1, overlap 1696842 GGGCAACTAATCTCC TGCCGGGCGTGA ACTCA TCGCGCCCG-CA TCTTTACTGCATCGA TERM 2359 1696964 - 1696978 + G 77 -7.1 -4.45077 | opp_overlap 1696963 TAACGCTCAACTTAC CGGTC TGTGC GACCG TTTTCGTGGTTTTTA rnt 1696941 - 1697588 + | ribonuclease T (RNase T) ECS88_1702 1697681 - 1697824 + | hypothetical protein, putative fragment of lhr gene TERM 2360 1697948 - 1697915 - T 81 -9.6 -4.12532 | opp_overlap 1697918 1697938, overlap 1697918 TTGGGGATAGAGAAA GGACTGACGGATGC CCGTTC GCATCCGTCAGTAT TGCAGGACGGATTAT TERM 2361 1697945 - 1697918 - T 93 -15.7 -3.09116 | opp_overlap 1697918 1697938, overlap 1697915 GGGATAGAGAAAGGA CTGACGGATGC CCGTTC GCATCCGTCAG TATTGCAGGACGGAT TERM 2362 1697918 - 1697945 + T 93 -15.7 -3.01791 | opp_overlap 1697915 1697918, overlap 1697938 GGGATAGAGAAAGGA CTGACGGATGC CCGTTC GCATCCGTCAG TATTGCAGGACGGAT ydhD 1698307 - 1697960 - | monothiol glutaredoxin TERM 2363 1698948 - 1698937 - g 70 -3.6 -4.65078 | overlap 1698925 ACACCGTCAATAAAA CGGC CTCA GCCA ACTTTACCGAAAAGT TERM 2364 1699039 - 1699010 - g 90 -7.9 -4.81249 | gap 1 TGTGAAAGTCAAAAA TGCCGCGTCAGGAA CCC TTGCCGACGCG-CA CAAAGCGAAGGTGCA TERM 2365 1699072 - 1699059 - g 84 -8.1 -4.62471 | GCGAAGGTGCAAAAA GCCAC AAAA GTGGC AATGAATAAACTGAT ydhO 1698642 - 1699457 + | putative exported hydrolase TERM 2366 1699490 - 1699460 - f 80 -9.2 -4.09511 | gap 1, opp_overlap 1699456 1699461 1699462, overlap 1699461 AACACTTCGCTAAAA CTTTACCCTGTTG TTACGG CAACAGGGT-AAG TTCATCTTTTGTCTC TERM 2367 1699490 - 1699461 - f 71 -9.4 -3.05224 | opp_overlap 1699456 1699461 1699462, overlap 1699460 ACACTTCGCTAAAAC TTTACCCTGTTG TTACGG CAACAGGGTAAG TTCATCTTTTGTCTC TERM 2368 1699461 - 1699490 + F 95 -12.3 -3.59432 | opp_overlap 1699460 1699461, overlap 1699456 1699462 ACACTTCGCTAAAAC TTTACCCTGTTGT TACG GCAACAGGGTAAG TTCATCTTTTGTCTC TERM 2369 1699462 - 1699489 + F 86 -13.6 -2.74575 | opp_overlap 1699460 1699461, overlap 1699461 1699456 CACTTCGCTAAAACT TTACCCTGTTGT TACG GCAACAGGGTAA GTTCATCTTTTGTCT sodB 1699585 - 1700166 + | superoxide dismutase, Fe TERM 2370 1700279 - 1700300 + T 100 -14.5 -5.38326 | opp_overlap 1700273 TGCCAGCAACTGTAA CGCAGAAGG TTAT CCTTCTGCG TTTTTGTTTAATTAG ydhP 1701481 - 1700312 - | putative efflux protein; MFS family TERM 2371 1700916 - 1700935 + g 73 -9.2 -3.68351 | TCTTTTTTCACTTCA GGTCGCGC CCCT GCGCCACC TTTAGGTAATGAGAA TERM 2372 1701598 - 1701564 - H 70 -3 -4.96276 | ACAAAAAAATGAAAA TAACAAAAAGAGAAAA CAC TTTTGCCATTTTGCTA ACAAACAGGAAGGAG TERM 2373 1702084 - 1702050 - g 79 -4.4 -4.90079 | gap 1, opp_overlap 1702050, overlap 1702052 ATGGCAACAATAAAA GATGTAGC-GAAACG AGCAAA CGTTTCCACTACAAC TGTGTCACACGTGAT TERM 2374 1702132 - 1702108 - g 91 -9.3 -4.71828 | overlap 1702129 ACGTGATCAACAAAA CACGTTTCGTC GCT GAAGAAACGCG CAATGCCGTGTGGGC TERM 2375 1702609 - 1702630 + G 81 -8.7 -4.37092 | gap 1, opp_overlap 1702609 1702607 CGCTGGAACGTAACA CCGGCGCAGG CCG CCT-TGCCGG TTTTATGAAGGCGAT TERM 2376 1702933 - 1702917 - g 70 -6.5 -4.21462 | overlap 1702919 ATCCATCAGCCAAAA GATTCGC TGG GCGAAAC AGCGTTCAACATGCT purR 1702035 - 1703060 + | DNA-binding transcriptional repressor, hypoxanthine-binding ydhB 1703989 - 1703057 - | putative DNA-binding transcriptional regulator; LysR-type TERM 2377 1703861 - 1703848 - G 70 -4.5 -4.57073 | gap 1, overlap 1703829 1703849 GACGTCGTTCAAAAA GC-GGC ACC GCCAGC CACTCTTCCAGCTGA ydhC 1704102 - 1705313 + | putative transporter; MFS superfamily cfa 1705604 - 1706752 + | cyclopropane fatty acyl phospholipid synthase (unsaturated-phospholipid methyltransferase) TERM 2378 1706764 - 1706784 + T 100 -14 -3.60475 | opp_overlap 1706754 CTAAAGGCTATTCTA TCGCCCCC TCTCC GGGGGCGA TTTCAGATCAGGCTT ribC 1707433 - 1706792 - | riboflavin synthase, alpha subunit TERM 2379 1707590 - 1707607 + H 80 -6.2 -4.85129 | overlap 1707605 CTGCTTCTTCTTTTT GCTGCC CATTCA GGCGGC TTTTTAGTCTCTCAT mdtK 1707648 - 1709021 + | multidrug efflux system transporter TERM 2380 1709028 - 1709058 + T 100 -12.7 -4.57073 | gap 1, opp_overlap 1709031, overlap 1709031 GCTCGCTAGTAAAGA CA-AGGCGCAACCT TCAC GGGTTGCGCCTGTG TTTTTACGCAGGCTG TERM 2381 1709031 - 1709054 + T 100 -14.6 -3.53855 | opp_overlap 1709031, overlap 1709028 CGCTAGTAAAGACAA GGCGCAACCT TCAC GGGTTGCGCC TGTGTTTTTACGCAG TERM 2382 1709054 - 1709031 - T 100 -13.9 -3.86252 | opp_overlap 1709031 1709028 CGCTAGTAAAGACAA GGCGCAACC TTCACG GGTTGCGCC TGTGTTTTTACGCAG ydhQ 1710318 - 1709062 - | hypothetical protein TERM 2383 1710496 - 1710485 - H 71 -2.2 -5.07486 | overlap 1710468 GATCCTGAATAAAAA TCGC CCTT GCAA ATCAACAAAATATAG TERM 2384 1710755 - 1710786 + H 80 -6.7 -4.76075 | gap 2, overlap 1710780 1710782 TTGACATGGTGGGGG TC-GGTG-GTTCGAG TCCA CTCGGACGCACCAGA TTTTCTTAATCTGGT TERM 2385 1711042 - 1711054 + G 83 -5.5 -5.1356 | opp_overlap 1711032 AAGAACCACGAAGCC GGTGG GAT CTACC TTTTTATTAATGAAA ydhR 1710892 - 1711197 + | hypothetical protein TERM 2386 1711197 - 1711179 - f 75 -9.6 -3.54676 | opp_overlap 1711175, overlap 1711175 ACTTAGTCAAATCAA TCAGGCAA AAC TCGCCTGA CAGAATTTAATCAAG TERM 2387 1711212 - 1711226 + F 91 -8.5 -4.90455 | opp_overlap 1711212 ACAGAATTTAATCAA GGGCG GTTAG CGCCC TTTTTATCCCTGTCT TERM 2388 1711226 - 1711212 - f 71 -8.5 -3.42379 | opp_overlap 1711212 ACAGAATTTAATCAA GGGCG GTTAG CGCCC TTTTTATCCCTGTCT TERM 2389 1711482 - 1711498 + G 72 -10.9 -3.05844 | opp_overlap 1711480 1711477 AACTCAAAACTGATG CTGGCAA ACA TTGCCAG TATTGAAATACCGCC TERM 2390 1712733 - 1712716 - g 72 -4.9 -4.6391 | gap 1, opp_overlap 1712719, overlap 1712719 AACAATTACAGAAAA CAGGGGAT GAA ATCCC-TG ATGTTGGCGAAGATT ydhS 1711323 - 1712927 + | conserved hypothetical protein; putative FAD/NAD(P)-binding domain ydhT 1713751 - 1712939 - | hypothetical protein ydhU 1714540 - 1713755 - | putative cytochrome b subunit of a reductase ydhX 1715205 - 1714537 - | putative 4Fe-4S ferridoxin-type subunit of oxidoreductase ydhW 1715916 - 1715269 - | hypothetical protein ydhV 1718022 - 1715920 - | putative ferredoxin:oxidoreductase subunit TERM 2391 1716013 - 1716026 + g 70 -4.5 -4.55295 | opp_overlap 1716009, overlap 1716008 CGGACAACCAAGCTG TGGGT CCCA GCCCA TTTCTTTGTAGAACA TERM 2392 1717096 - 1717112 + g 81 -6.5 -4.87037 | opp_overlap 1717099, overlap 1717097 ACAACGGATCGGGCA AGAGTGG CAG CCACTCA TTTTTACTGTGTATT TERM 2393 1717097 - 1717111 + g 74 -10 -3.50595 | opp_overlap 1717099, overlap 1717096 CAACGGATCGGGCAA GAGTGG CAG CCACTC ATTTTTACTGTGTAT TERM 2394 1717746 - 1717732 - G 76 -4.2 -5.00616 | TTGCGCTGCAAAAAA GCCC CCCATAT GGGC ATCGACGACTAAATT ydhY 1718669 - 1718043 - | putative 4Fe-4S ferridoxin-type subunit of oxidoreductase TERM 2395 1718854 - 1718844 - R 76 -2.6 -5.31275 | opp_overlap 1718844 GGTTAGGAGAAAAAA TAAT GTG ATTA TTCTGGGCTCTTAAC TERM 2396 1719121 - 1719090 - R 77 -8.9 -3.83675 | gap 1, opp_overlap 1719087, overlap 1719092 CAACTGAAGCAAGAA TATCAGGATGAAGC TTACC GCCTCATCCTGA-A TGGTCATTTTACCAG TERM 2397 1719120 - 1719092 - R 100 -14 -3.4945 | opp_overlap 1719087, overlap 1719090 ACTGAAGCAAGAATA TCAGGATGAAGC TTACC GCCTCATCCTGA ATGGTCATTTTACCA ydhZ 1719334 - 1719125 - | hypothetical protein TERM 2398 1720851 - 1720863 + G 81 -9.1 -4.08706 | opp_overlap 1720851 1720850 1720848 GCAAAAGGTAAATAC CCGCT GGA AGCGG TTTCTATCATGGCGA pykF 1719891 - 1721303 + | pyruvate kinase I TERM 2399 1721351 - 1721336 - f 81 -11.8 -3.12847 | opp_overlap 1721336 AATTTGTATATCGAA GCGCCC TGAT GGGCGC TTTTTTTATTTAATC TERM 2400 1721336 - 1721351 + F 100 -11.8 -5.99154 | opp_overlap 1721336 AATTTGTATATCGAA GCGCCC TGAT GGGCGC TTTTTTTATTTAATC TERM 2401 1721776 - 1721751 - g 70 -9.7 -3.17212 | gap 1 TGACCAGCTGAGCAA CGACGTGAACGC AAT GCGTTC-CGACG TTCAGGCTGCTAAAG lpp 1721614 - 1721850 + | murein lipoprotein TERM 2402 1721890 - 1721872 - T 100 -14.6 -4.74103 | opp_overlap 1721872 CTGTGAAGTGAAAAA TGGCGCAC GAT GTGCGCCA TTTTTTTGCCTGCTA TERM 2403 1721872 - 1721890 + T 100 -14.6 -5.48825 | opp_overlap 1721872 CTGTGAAGTGAAAAA TGGCGCAC GAT GTGCGCCA TTTTTTTGCCTGCTA ynhG 1722917 - 1721913 - | hypothetical protein TERM 2404 1722747 - 1722768 + g 71 -2.1 -4.88388 | opp_overlap 1722748 1722750, overlap 1722748 TGCCGCAGTATCAAA ACGTCGGGC GATG GCCTGAAGG TTTTTATCCCCTTCT sufE 1723482 - 1723066 - | sulfur acceptor protein TERM 2405 1723272 - 1723228 - G 74 -6.3 -4.57581 | opp_overlap 1723248 1723254 ATCGTAAAGAATAAA GACGACCGCAATAAGCCCTTT TAC AATGGCCGCATCGCTGTCGCC ATGTAATTCAATAAT sufS 1724715 - 1723495 - | selenocysteine lyase, PLP-dependent TERM 2406 1724162 - 1724173 + g 74 -5.8 -4.52589 | GCAAGTGTGATCATC TCCG CCAG CGGA TTTTCTGTCCCAAGC sufD 1725983 - 1724712 - | component of SufBCD complex sufC 1726704 - 1725958 - | component of SufBCD complex, ATP-binding component of ABC superfamily sufB 1728201 - 1726714 - | component of SufBCD complex TERM 2407 1727862 - 1727851 - G 81 -7.2 -4.65895 | opp_overlap 1727850 CTCTTTACTTAAAAA GGCG TTCG CGCC AGTTTGCTGCACCGC sufA 1728578 - 1728210 - | Fe-S cluster assembly protein TERM 2408 1728871 - 1728901 + r 100 -19.2 -3.86897 | opp_overlap 1728871 TCAGAAATAAGAAAA CCCTTAAGTCTGTG CGA CACAGGCTTAAGGG TTTCTACCCCATCCG TERM 2409 1728901 - 1728871 - R 100 -17 -5.05116 | opp_overlap 1728871 TCAGAAATAAGAAAA CCCTTAAGTCTGTG CGA CACAGGCTTAAGGG TTTCTACCCCATCCG ydiH 1729396 - 1729127 - | hypothetical protein TERM 2410 1729372 - 1729337 - G 74 -9.8 -3.48276 | overlap 1729339 1729340 CTCGCTTTTAGACAA GACCTGCACAGTATAC CACC GTTTACTGTGCAGATA ATAACCAAAAGCAAT TERM 2411 1729370 - 1729339 - G 83 -12.4 -3.31726 | overlap 1729337 1729340 CGCTTTTAGACAAGA CCTGCACAGTATAC CACC GTTTACTGTGCAGA TAATAACCAAAAGCA TERM 2412 1729369 - 1729340 - G 84 -13.7 -2.58822 | overlap 1729339 1729337 GCTTTTAGACAAGAC CTGCACAGTATAC CACC GTTTACTGTGCAG ATAATAACCAAAAGC ydiI 1729825 - 1729415 - | putative esterase ydiJ 1732878 - 1729822 - | putative conserved FAD-linked oxidoreductase TERM 2413 1731364 - 1731346 - G 81 -4.5 -5.14563 | opp_overlap 1731355 TTCCTCACCAAAAAA CGCCG GGCTGTATT CGGCG CGAAAACCTTTGCCG ydiK 1733092 - 1734204 + | conserved hypothetical protein; putative inner membrane protein TERM 2414 1734212 - 1734232 + F 100 -16.9 -3.62775 | opp_overlap 1734205 1734206 ATAAGTAATTTCTCA TCAGGCGGC TCT GCCGCCTGA TTGTTAACCCCTGCT TERM 2415 1734468 - 1734487 + F 100 -9.3 -5.82388 | CTGTGTGTAGTCTTT GCCCATC TCCCAC GATGGGC TTTTTTTTAACATTT ydiL 1734633 - 1734989 + | hypothetical protein ydiM 1735089 - 1736303 + | putative transporter; MFS superfamily ydiN 1736530 - 1737795 + | putative transporter TERM 2416 1738270 - 1738258 - g 70 -3.5 -4.66535 | opp_overlap 1738246 AAGGTTTAAAAGAAA TTAAA CTC TTTAA CCGTCGGGATGAGTT ydiB 1737807 - 1738673 + | quinate/shikimate 5-dehydrogenase, NAD(P)-binding TERM 2417 1739409 - 1739394 - g 91 -5.4 -5.40072 | gap 1 GGTGCGGTAAAAAAA GCCTCTG CGC CAG-GGC AAATCTCGGTAAATG aroD 1738704 - 1739462 + | 3-dehydroquinate dehydratase TERM 2418 1739503 - 1739470 - f 81 -9.6 -3.86312 | overlap 1739473 AGGCATAAGCAATAA TATTTCGGCGGGAA TACCCT CCCCCGCCGAACTA AAAAAAGTATTTTTA TERM 2419 1739500 - 1739473 - f 77 -11.3 -2.70018 | overlap 1739470 CATAAGCAATAATAT TTCGGCGGGAA TACCCT CCCCCGCCGAA CTAAAAAAAGTATTT TERM 2420 1740987 - 1740974 - g 81 -6.7 -4.62069 | opp_overlap 1740980, overlap 1740976 CTTTCAGTGGAAAAA TCGCT CTCA AGCGA GGGCTGGATGTTCGT ydiF 1739608 - 1741203 + | short chain acyl-CoA transferase: fused alpha subunit ; beta subunit TERM 2421 1741333 - 1741321 - g 70 -6.2 -4.2558 | overlap 1741330 CACCTGCGATCAAAA CGGG ACATA CCCG CGTGAGTTTATGCGG ydiO 1741217 - 1742368 + | putative acyl-CoA dehydrogenase TERM 2422 1742373 - 1742408 + T 72 -10.4 -2.91276 | opp_overlap 1742370 1742366 1742362, overlap 1742372 AGAACAAATAATCTG CAGGCGGCGCAG CCTCTTAACAAA CTGCGCCGCCAG ATTTATCCGGCAAGA ydiP 1743322 - 1742411 - | putative DNA-binding transcriptional regulator TERM 2423 1743387 - 1743355 - R 91 -6.3 -5.34309 | opp_overlap 1743362 1743386, overlap 1743363 ATGAGCAAACAAAAA CAATATATGCCGGAT AAA ATACGGCGTGTATTG CGGTTATACAACCGC ECS88_1747 1743601 - 1743425 - | hypothetical protein TERM 2424 1743783 - 1743764 - g 72 -10.8 -3.07994 | CTCAATGCCATTGAA GTTGCAAG CCAG CTTGCAAC AGATGACGATGAGAT ydiQ 1743638 - 1744402 + | putative electron transfer flavoprotein subunit (etfB-like) ydiR 1744422 - 1745360 + | putative electron transfer flavoprotein subunit, FAD-binding ydiS 1745415 - 1746704 + | putative oxidoreductase subunit with FAD/NAD(P)-binding domain ydiT 1746701 - 1746994 + | putative 4Fe-4S ferredoxin-type oxidoreductase subunit TERM 2425 1747005 - 1747030 + G 84 -11.2 -3.81755 | gap 1, overlap 1747007 GCTAATCATGCATCC CA-CAGGCCCG CATCT CGGGCCTGATG TTCTGTTTCGAGAGT TERM 2426 1747007 - 1747027 + G 84 -14 -2.69057 | overlap 1747005 TAATCATGCATCCCA CAGGCCCG CATCT CGGGCCTG ATGTTCTGTTTCGAG TERM 2427 1747187 - 1747172 - g 72 -5.4 -4.54047 | CGATGCCAGACAAAA TTGCCG TGGT CGACAA TCATGGTGCAACGTA TERM 2428 1747896 - 1747908 + G 91 -10.5 -4.16904 | TTGCACCTGTATGCT CGGCG CAA CGCCG TTTGTCTATGATCTT ydiD 1746997 - 1748697 + | short chain acyl-CoA synthetase, anaerobic TERM 2429 1748717 - 1748751 + T 76 -4.1 -5.10665 | opp_overlap 1748723, overlap 1748721 1748723 CATCTTCGGGGATCA CATAAACCCGGCGAC AAAAC GCCGCCGGGTATTTA TTTTATTTCTTCAGT TERM 2430 1748721 - 1748747 + T 93 -9.3 -5.02645 | opp_overlap 1748723, overlap 1748717 1748723 TTCGGGGATCACATA AACCCGGCGAC AAAAC GCCGCCGGGTA TTTATTTTATTTCTT TERM 2431 1748723 - 1748745 + T 93 -11.9 -4.08474 | opp_overlap 1748723, overlap 1748721 1748717 CGGGGATCACATAAA CCCGGCGAC AAAAC GCCGCCGGG TATTTATTTTATTTC TERM 2432 1748745 - 1748723 - T 100 -14.8 -4.08706 | opp_overlap 1748723 1748721 1748717 CGGGGATCACATAAA CCCGGCGACA AAA CGCCGCCGGG TATTTATTTTATTTC pps 1751132 - 1748754 - | phosphoenolpyruvate synthase TERM 2433 1749444 - 1749426 - G 78 -8 -4.36914 | opp_overlap 1749425, overlap 1749410 1749407 GCGCTTCGGATAAAA CGCGGCAC CCA GCGTCGCG ATCCCTTCAGTCAGA ydiA 1751465 - 1752298 + | hypothetical protein TERM 2434 1752285 - 1752315 + F 81 -9.9 -4.05512 | gap 1, opp_overlap 1752295 TCATGGGCCTTAGCC GCCGAATGTACTAG AGAA CTAGTGCATT-GGC TTACTTTTTTGTTAT TERM 2435 1753109 - 1753096 - g 86 -6.7 -4.96848 | opp_overlap 1753096, overlap 1753098 CTCGCCAGACAAAAA TGGTC AGAT GACCA TCTATCAGACCAGCG aroH 1752455 - 1753501 + | 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, tryptophan repressible TERM 2436 1753507 - 1753530 + F 100 -13.2 -3.86822 | TCGCTTCTGAATGCG TGCCCATTCC TGAC GGGATGGGCA TTTCTGCGCAACTTG ydiE 1753633 - 1753824 + | conserved hypothetical protein; putative hemin uptake protein ydiU 1755264 - 1753828 - | hypothetical protein ydiV 1756040 - 1755327 - | hypothetical protein TERM 2437 1756274 - 1756248 - R 100 -21 -3.79747 | opp_overlap 1756248 GTATTCAGGAGTAAA TGGACGGCGATG TAT CATCGCCGTCCA TTTTTCGACATACTA TERM 2438 1756248 - 1756274 + r 100 -21 -4.60487 | opp_overlap 1756248 GTATTCAGGAGTAAA TGGACGGCGATG TAT CATCGCCGTCCA TTTTTCGACATACTA nlpC 1756751 - 1756287 - | putative peptidase lipoprotein TERM 2439 1756458 - 1756443 - G 72 -5.4 -4.56775 | gap 1, overlap 1756445 ACCCGTTTTGAAAAA GACCAGG TCA CCTGG-C AGCAACTCGTCTTTA TERM 2440 1756457 - 1756445 - G 78 -9.1 -3.90048 | overlap 1756443 CCGTTTTGAAAAAGA CCAGG TCA CCTGG CAGCAACTCGTCTTT btuD 1757578 - 1756829 - | vitamin B12 transporter subunit : ATP-binding component of ABC superfamily btuE 1758129 - 1757578 - | putative glutathione peroxidase btuC 1759171 - 1758191 - | vitamin B12 transporter subunit: membrane component of ABC superfamily TERM 2441 1759254 - 1759240 - R 100 -12.8 -5.80951 | opp_overlap 1759240 AGTGAAAAGAAAAAA GGCCGC AGA GCGGCC TTTTTAGTTAGATCA TERM 2442 1759240 - 1759254 + r 100 -12.8 -4.88407 | opp_overlap 1759240 AGTGAAAAGAAAAAA GGCCGC AGA GCGGCC TTTTTAGTTAGATCA ihfA 1759571 - 1759272 - | integration host factor (IHF), DNA-binding protein, alpha subunit pheT 1761963 - 1759576 - | phenylalanine tRNA synthetase, beta subunit pheS 1762961 - 1761978 - | phenylalanine tRNA synthetase, alpha subunit TERM 2443 1762844 - 1762856 + g 71 -2.6 -5.0133 | GGGTCGTCATCTGAA GGGT TAAGT GCCC TTTTTTACCCAAATA TERM 2444 1763132 - 1763147 + r 100 -6.1 -5.61881 | opp_overlap 1763131 GGCTGCGACAATTAC GCCTG ATGAGA CAGGC TTTTTATTTTTCAAA TERM 2445 1763180 - 1763195 + r 77 -10.4 -3.55815 | opp_overlap 1763180 GCGCATACAAAAAAA GCCTCC ACTG GGAGGC TTTCAGGCGCTGTTT TERM 2446 1763195 - 1763180 - R 100 -10.4 -5.71712 | opp_overlap 1763180 GCGCATACAAAAAAA GCCTCC ACTG GGAGGC TTTCAGGCGCTGTTT pheM 1763289 - 1763245 - | phenylalanyl-tRNA synthetase operon leader peptide TERM 2447 1763382 - 1763400 + r 78 -10.3 -3.62418 | opp_overlap 1763382 GCGTTGAAACGAAAA GAGGGAG ACTAG CTCCCTC TTTCAACTGGCTTAT TERM 2448 1763400 - 1763382 - R 89 -10.3 -4.54727 | opp_overlap 1763382 GCGTTGAAACGAAAA GAGGGAG ACTAG CTCCCTC TTTCAACTGGCTTAT rplT 1763768 - 1763412 - | 50S ribosomal subunit protein L20 rpmI 1764018 - 1763821 - | 50S ribosomal subunit protein L35 TERM 2449 1764106 - 1764060 - R 74 -5.9 -4.66537 | gap 1, opp_overlap 1764065, overlap 1764056 1764069 AATAAACGAAACAAA GGCGAACAATGCCTGTGAAGCC CAAA GGCTCCACAGACAGTGCT-ACT TGAAGGCCTTACTGT TERM 2450 1764098 - 1764069 - R 100 -15.1 -3.72593 | opp_overlap 1764065, overlap 1764056 1764060 AACAAAGGCGAACAA TGCCTGTGAAGCC CAAA GGCTCCACAGACA GTGCTACTTGAAGGC TERM 2451 1764257 - 1764281 + r 73 -6.4 -4.39571 | gap 1 TGCTGGTGCGCCATC TCACGACCGCG GAAA CGCAG-CGTGA TTTTGGCTTTATCAC thrS 1766589 - 1764661 - | threonyl-tRNA synthetase TERM 2452 1765660 - 1765670 + g 71 -2.4 -5.00616 | ATCTTTGTAGTTGTC CCAG TGA CCGG TTTTTTCCCACAGGA TERM 2453 1765861 - 1765875 + g 73 -9.2 -3.62522 | ACCGATTTTACGGTG GTCGCG TTT CGCGGC TTCTTCCAGGCGTTG TERM 2454 1765898 - 1765908 + g 90 -4.6 -5.36441 | AGGCGTTGCAGGTAA GCGT TAA GCGC TTTTTTGTCTGCCCA TERM 2455 1767419 - 1767409 - H 83 -4 -5.34555 | opp_overlap 1767409 TTACACTATAAAAAA GAAA TCA TTTC CTTATTTCTGGAAAC ECS88_1771 1767595 - 1768035 + | hypothetical protein ECS88_1773 1768202 - 1768420 + | hypothetical protein TERM 2456 1768466 - 1768438 - T 95 -10.9 -4.62475 | opp_overlap 1768437, overlap 1768440 AGTGACAAACGAAAA CAGCCAGACCGCA TAA CACGGTCCGGCAG ATAATTTTACATGCT TERM 2457 1768464 - 1768440 - T 93 -12.1 -3.91676 | opp_overlap 1768437, overlap 1768438 TGACAAACGAAAACA GCCAGACCGCA TAA CACGGTCCGGC AGATAATTTTACATG ydiY 1769231 - 1768473 - | hypothetical protein TERM 2458 1768711 - 1768723 + g 73 -9.1 -3.67141 | opp_overlap 1768697, overlap 1768696 GCCCCGGAGGCATAG CCCAG CGG CTGGG TTTCACTGGCATTGT TERM 2459 1769098 - 1769108 + g 83 -5.4 -5.03314 | opp_overlap 1769098 CCTGCGTTCAGATTA CCTT CGA AAGG TTTTTTAGCGCTGGC TERM 2460 1769275 - 1769259 - H 100 -6.5 -5.88565 | CGTACAACAAAAAAA GAGACCA TCG CGGTCCC GGAAACTTTCTTAAG pfkB 1769517 - 1770446 + | 6-phosphofructokinase II TERM 2461 1770476 - 1770453 - f 84 -6.7 -5.06414 | overlap 1770455 TCCCGCTAACAAAAA CATTCCCCC TGCATT GGGGGAATC ACCACCAACCTGTCG TERM 2462 1770474 - 1770455 - f 82 -9.3 -4.16307 | overlap 1770453 CCGCTAACAAAAACA TTCCCCC TGCATT GGGGGAA TCACCACCAACCTGT ydiZ 1770547 - 1770837 + | hypothetical protein TERM 2463 1771239 - 1771251 + G 90 -9.1 -4.48713 | ACCTCGCCCGCTGGA TGCGC ATA GCGCA TTTATTCTTGGTCAG yniA 1770943 - 1771803 + | putative phosphotransferase/kinase TERM 2464 1771821 - 1771837 + T 90 -10.8 -4.43477 | opp_overlap 1771821 1771820 TGGGTTGAGGATAAT GGCCGC TCCGT GCGGCC TTTTGATTAAATAAA TERM 2465 1771837 - 1771821 - T 74 -10.8 -2.64099 | opp_overlap 1771821, overlap 1771820 TGGGTTGAGGATAAT GGCCGC TCCGT GCGGCC TTTTGATTAAATAAA yniB 1772380 - 1771844 - | conserved hypothetical protein; putative inner membrane protein TERM 2466 1772118 - 1772098 - G 81 -6.1 -4.84359 | overlap 1772101 CCAGTCCGACAAAAA TCAGGATGA AAA TCACCCAGA ACATAACGTTCACGC TERM 2467 1772195 - 1772184 - G 90 -7.2 -5.15381 | AACACATTCAAAAAA GGCG TATT CGCC TGCATCATATCGACC yniC 1772527 - 1773195 + | putative phosphoglycolate phosphatase TERM 2468 1773199 - 1773227 + F 100 -15.4 -4.16301 | gap 1, opp_overlap 1773199, overlap 1773203 CTTCTCGGTTAATGA CCAGGGGGCAGTG ATCG CACTGCCCC-TGG TTCTTTATCTGAATT TERM 2469 1773227 - 1773199 - f 93 -15.4 -2.70932 | gap 1, opp_overlap 1773199 1773203 CTTCTCGGTTAATGA CCAGGGGGCAGTG ATCG CACTGCCCC-TGG TTCTTTATCTGAATT TERM 2470 1773203 - 1773224 + F 100 -15.9 -3.09322 | opp_overlap 1773199, overlap 1773199 TCGGTTAATGACCAG GGGGCAGTG ATCG CACTGCCCC TGGTTCTTTATCTGA TERM 2471 1773349 - 1773320 - f 73 -4.3 -4.85599 | gap 1, opp_overlap 1773322 1773327, overlap 1773322 TGCACTGTATAAAAA CCCTATACTGTACG TAT CG-ACAGTTTAGTG AGTTTTATCATGACG TERM 2472 1773367 - 1773382 + G 73 -4 -4.74767 | gap 1, overlap 1773368 TTTTATCATGACGGC G-GAAGG TCA CCTTCTC TTTTCTATTGCTTGT TERM 2473 1773368 - 1773380 + G 72 -7.7 -3.97283 | overlap 1773367 TTTATCATGACGGCG GAAGG TCA CCTTC TCTTTTCTATTGCTT ydjM 1773359 - 1773949 + | conserved hypothetical protein; putative inner membrane protein regulated by LexA TERM 2474 1773965 - 1773953 - f 76 -5.5 -4.87626 | opp_overlap 1773953, overlap 1773946 GTTGAATACTAAAAA GGCAA AAA TCGCC TTTCTGGAATAAGCA TERM 2475 1774641 - 1774655 + G 70 -3.6 -4.59853 | CCAATCCGACGTCAA TTATCA GCG TGGTAA TTTTTGCCGCATTCC ydjN 1774082 - 1775473 + | putative cation-acid symporter TERM 2476 1775494 - 1775514 + T 100 -9 -5.95946 | opp_overlap 1775494 ATTTGTTACGTTAAA CGCCTGTC ATCCC GACAGGTG TTTTTTTATTCTTCG cedA 1775774 - 1775520 - | cell division modulator TERM 2477 1777385 - 1777407 + G 76 -7.6 -4.21194 | opp_overlap 1777369 1777370 1777383 1777385 TGGCCGCGCGAAACA CCGCCGGG GCCGAAA CGCGGCGG TTTTGAATCATACCA katE 1775966 - 1778227 + | hydroperoxidase HPII(III) (catalase) TERM 2478 1778268 - 1778229 - T 81 -10.8 -3.5394 | gap 1, opp_overlap 1778229 1778230, overlap 1778231 1778238 AAATCCCGGCGTAAA TATGGATAAGGTCACGCCC CTG GGGAGTGACCTTA-CCACC TTACTTACACATCAT TERM 2479 1778230 - 1778267 + T 79 -12.1 -2.60723 | gap 1, opp_overlap 1778229 1778231 1778238, overlap 1778229 AATCCCGGCGTAAAT ATGGATAAGGTCACGCCC CTG GGGAGTGACCTTA-CCAC CTTACTTACACATCA TERM 2480 1778266 - 1778231 - T 100 -15.6 -3.34517 | gap 1, opp_overlap 1778230 1778229, overlap 1778229 1778238 ATCCCGGCGTAAATA TGGATAAGGTCACGCCC CTG GGGAGTGACCTTA-CCA CCTTACTTACACATC TERM 2481 1778260 - 1778238 - T 100 -13.4 -3.452 | opp_overlap 1778230 1778229, overlap 1778231 1778229 CGTAAATATGGATAA GGTCACGCCC CTG GGGAGTGACC TTACCACCTTACTTA chbG 1779031 - 1778273 - | hypothetical protein chbF 1780396 - 1779044 - | cryptic phospho-beta-glucosidase, NAD(P)-binding chbR 1781342 - 1780500 - | DNA-binding transcriptional dual regulator TERM 2482 1781076 - 1781046 - G 79 -4.7 -5.00884 | ATGCTGCTCAAAAAA GCGTTTACTGATC CCAAC GTTCAATATACGC GTGGCACCAAATTCA TERM 2483 1781233 - 1781245 + g 71 -3.4 -4.79352 | TGCTGATGCAGTCCG CTGA TACTC TCAG TTTTATTGTAGATAA chbA 1781700 - 1781350 - | N,N'-diacetylchitobiose-specific enzyme IIA component of PTS TERM 2484 1781527 - 1781546 + g 70 -3.6 -4.72272 | gap 1 TTCATTCAATGCCAT CCGTGACTG ATC CA-TCATGG TTTTTGCTGCGGCAA chbC 1783109 - 1781751 - | N,N'-diacetylchitobiose-specific enzyme IIC component of PTS TERM 2485 1782999 - 1783020 + g 79 -4.4 -4.90013 | CCCCGCAAGGGTTAA CGGCATTA AGCGAA TAAAGCCG TTTTTGATTGCATTA TERM 2486 1783148 - 1783129 - R 74 -7.9 -4.11773 | opp_overlap 1783129 1783123 AAATACCCTTTAAAA CCGCAAT TTAAAT ATTGCGG TATTGATTTATGAAA chbB 1783514 - 1783194 - | N,N'-diacetylchitobiose-specific enzyme IIB component of PTS TERM 2487 1783763 - 1783778 + r 70 -7.5 -3.8646 | opp_overlap 1783763 ACAGGCCAAAAAAAA CCGGC GCAATG GCCGG TTTCCGTTGTTACTC TERM 2488 1783778 - 1783763 - R 100 -7.5 -5.79526 | opp_overlap 1783763 ACAGGCCAAAAAAAA CCGGC GCAATG GCCGG TTTCCGTTGTTACTC osmE 1784151 - 1783813 - | DNA-binding transcriptional activator TERM 2489 1785094 - 1785078 - g 71 -3 -4.74103 | gap 1 TCTGGAAGGGAAAAA CGTACCT GAAC AGGT-CG CCAGAACAATAGAGA nadE 1784353 - 1785180 + | NAD synthetase, NH3/glutamine-dependent TERM 2490 1785252 - 1785211 - f 89 -10.1 -4.56597 | opp_overlap 1785217 GGTTTGTGCGAAAAA GAGTACTTTGTTCACGCCG GATG CGGCGTGAACGCCTTACTC GACCTACAAAACTAT TERM 2491 1785750 - 1785734 - g 70 -6.5 -4.16016 | opp_overlap 1785739 CCACTGTTTAATAAA CGCTTGC GGC GCAATCG CCAGCTCTGTGCCCT ydjQ 1785410 - 1786297 + | endonuclease of nucleotide excision repair ydjR 1786832 - 1786257 - | hypothetical protein TERM 2492 1786959 - 1787013 + r 88 -12.1 -3.52779 | opp_overlap 1786961, overlap 1786961 GAGAAGAGAAAAGAA AACCGCCGATCCTGTCCACCGCATT ACTGC AAGGTAGTGGACAAGACCGGCGGTC TTACGTTTTTTGGCT TERM 2493 1787011 - 1786961 - R 100 -19.8 -5.26907 | opp_overlap 1786959 1786961 GAAGAGAAAAGAAAA CCGCCGATCCTGTCCACCGCATTA CTG CAAGGTAGTGGACAAGACCGGCGG TCTTACGTTTTTTGG TERM 2494 1786961 - 1787011 + r 100 -14.7 -3.3244 | opp_overlap 1786961, overlap 1786959 GAAGAGAAAAGAAAA CCGCCGATCCTGTCCACCGCATT ACTGC AAGGTAGTGGACAAGACCGGCGG TCTTACGTTTTTTGG spy 1787520 - 1787035 - | envelope stress induced periplasmic protein TERM 2495 1787808 - 1787857 + r 74 -3.5 -5.03145 | opp_overlap 1787811 1787820, overlap 1787811 1787817 1787818 1787819 GTATTAATTTATAAG AAAGCAACTTAATACCCGCAGAA TGAT TTCTGCGGGTAAGTATTAGCTTA TTTTTTCGAGCATTA TERM 2496 1787811 - 1787854 + r 73 -5.2 -4.61482 | opp_overlap 1787811 1787820, overlap 1787808 1787817 1787818 1787819 TTAATTTATAAGAAA GCAACTTAATACCCGCAGAA TGAT TTCTGCGGGTAAGTATTAGC TTATTTTTTCGAGCA TERM 2497 1787817 - 1787849 + r 71 -8.6 -3.43246 | gap 1, opp_overlap 1787811 1787820, overlap 1787811 1787808 1787818 1787819 TATAAGAAAGCAACT TA-ATACCCGCAGAA TGAT TTCTGCGGGTAAGTA TTAGCTTATTTTTTC TERM 2498 1787818 - 1787847 + r 70 -9.3 -3.25449 | opp_overlap 1787811 1787820, overlap 1787817 1787811 1787808 1787819 ATAAGAAAGCAACTT AATACCCGCAGAA TGAT TTCTGCGGGTAAG TATTAGCTTATTTTT TERM 2499 1787819 - 1787846 + r 81 -12.8 -2.53642 | opp_overlap 1787811 1787820, overlap 1787818 1787817 1787811 1787808 TAAGAAAGCAACTTA ATACCCGCAGAA TGAT TTCTGCGGGTAA GTATTAGCTTATTTT TERM 2500 1787845 - 1787820 - R 100 -16.3 -3.2827 | opp_overlap 1787819 1787818 1787817 1787811 1787808, overlap 1787811 AAGAAAGCAACTTAA TACCCGCAGAA TGAT TTCTGCGGGTA AGTATTAGCTTATTT astE 1788818 - 1787850 - | succinylglutamate desuccinylase TERM 2501 1788766 - 1788779 + g 81 -4.5 -5.055 | overlap 1788767 CCGTTGATTTCTCGC TCGGT GATG ACCGG TTTTTTACCCGTTAA astB 1790154 - 1788811 - | succinylarginine dihydrolase TERM 2502 1789716 - 1789701 - G 70 -4.7 -4.56597 | opp_overlap 1789688 CTTCGTCGTTAAAAA TCGCT TTTAAC AGCGA TTCGGTGACGGGGGC astD 1791629 - 1790151 - | succinylglutamic semialdehyde dehydrogenase TERM 2503 1791236 - 1791210 - G 100 -14.4 -3.56821 | opp_overlap 1791235 ATTATACGGCCCAAA CACCGCCAGCAC GCC GTGCGGGCGATG TCGCAGGCTCGCCGC astA 1792660 - 1791626 - | arginine succinyltransferase TERM 2504 1791760 - 1791723 - G 78 -8.3 -4.19735 | gap 1, opp_overlap 1791752 GCGGTTAAAATCAAA CGCTCGGTCGCTGGATCG GTA CGCACCAGC-ACCACGCG GAAATGGTGATAATT TERM 2505 1792304 - 1792286 - G 79 -10.2 -3.85698 | opp_overlap 1792278 CTTCGGGTCGAGAAA CAGCGTGC ACA GCTCGCTG CTGCCGGTGTGATCG astC 1793877 - 1792657 - | succinylornithine transaminase, PLP-dependent TERM 2506 1793180 - 1793198 + g 74 -7.4 -4.08144 | CAGGCATACAGTTCC CCGGTG CGCCCGA CACCGG TTTGTACTTCATCAA TERM 2507 1794545 - 1794559 + G 76 -9.2 -3.78775 | opp_overlap 1794535 1794533 AAAGAGACGCCGATT GCCGTG CGT CGCGGC TTTCCTGGTGACGAC xthA 1794323 - 1795129 + | exonuclease III ydjX 1795296 - 1796006 + | conserved hypothetical protein; putative inner membrane protein TERM 2508 1796532 - 1796522 - g 71 -2.4 -4.92791 | CAGAAGAGAAGAAAA CGGG TTG CCTG GTGTGTCTGGATAGC ydjY 1796011 - 1796688 + | hypothetical protein TERM 2509 1797027 - 1797040 + G 79 -2.3 -5.24129 | overlap 1797022 CCAGTTCGATGGCCG GCGCG GCAC TGTGC TTTTTTATCGCCAGA ydjZ 1796702 - 1797409 + | conserved hypothetical protein; putative inner membrane protein ynjA 1797409 - 1797957 + | hypothetical protein TERM 2510 1798642 - 1798606 - g 70 -5.8 -4.28045 | gap 2, opp_overlap 1798612 ACAGCATTAAAAGAA GCGCCG-GACG-ATGCGA CTT TCGCCCGCGTCACTGCGC CCTTGTGGCAATATC TERM 2511 1798793 - 1798805 + G 73 -9.1 -3.64703 | opp_overlap 1798793 1798795 ATGCGCAGCAAAAAA TCGCC AGC GGCGA TTTGCCTGCAAGCAG TERM 2512 1798805 - 1798793 - g 95 -9.1 -5.14965 | opp_overlap 1798793, overlap 1798795 ATGCGCAGCAAAAAA TCGCC AGC GGCGA TTTGCCTGCAAGCAG TERM 2513 1799016 - 1799002 - g 81 -7.1 -4.59773 | CTCGATCCGCAAAAA CTGCC TGACG GGCAG CGCGAATCATTGCAA ynjB 1797967 - 1799133 + | hypothetical protein ynjC 1799151 - 1800641 + | fused putative transporter subunits of ABC superfamily: membrane components ynjD 1800641 - 1801294 + | putative sulfate/thiosulfate transporter subunit: ATP-binding component of ABC superfamily transporter TERM 2514 1802641 - 1802626 - g 81 -4.6 -5.09895 | overlap 1802627 CAGCGATCCAAAAAA TCCGGT AGCA ACCGGT GAACGCGGCCCGGAC ynjE 1801361 - 1802668 + | putative exported thiosulfate sulfur transferase / thiosulfate binding protein TERM 2515 1802706 - 1802680 - T 93 -15.2 -2.75803 | ATAACATTGCAATTA CTGACGCTGGAG CGA CTTCAGCGTCAG ATACCCACTCCACAC ynjF 1803297 - 1802677 - | putative phosphatidyl transferase, inner membrane protein TERM 2516 1802827 - 1802809 - G 72 -6 -4.35604 | GCAACTCAGAACAAA CAGCAAAA TCG TCTCGCTG CCTTCGGTTAACCCG TERM 2517 1802961 - 1802974 + g 70 -5.9 -4.26903 | opp_overlap 1802950 1802945 1802952 1802955 CAAACAGCAGCCAGC CGCCT GCCA GGGCG TTTTGCTCCGGTGCG nudG 1803384 - 1803791 + | pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase TERM 2518 1803905 - 1803882 - f 100 -12.4 -3.87815 | overlap 1803898 TTTGATCCTGATAAA CGCAGCACTG AGTA CAGGGCTGCG CTGACTGCCCGCCTG TERM 2519 1804340 - 1804312 - g 70 -6.7 -4.12902 | gap 1 CAACCATGTCCAAAA GCGCG-ACCCGA ATCAAA CCGAGTTCGCGC AAGCCGTTCGTGAAG gdhA 1804265 - 1805608 + | glutamate dehydrogenase, NADP-specific TERM 2520 1805649 - 1805615 - T 77 -11.5 -2.81072 | gap 1, overlap 1805609 1805614 GTGATTTAAGACAAT TGTGCCGGATACAGCG CAAA CGCCTTATCCGGC-CA TAAAAATCTTCAGTA TERM 2521 1805703 - 1805725 + T 100 -11.3 -5.41143 | gap 1 TGTTATCACTCCATT GCCCGCC-TC TTCT GATGGCGGGC TTTTTTTCGGCGCTC topB 1807640 - 1805685 - | DNA topoisomerase III TERM 2522 1806252 - 1806264 + g 81 -6.9 -4.71426 | opp_overlap 1806247 CGCCACCACAGGCAG CGGCG TGC CGTCG TTTTCTTCATCGCGC TERM 2523 1806497 - 1806510 + g 74 -3.1 -4.91109 | gap 1 TCGGAATGATGGCGT GGTGCG CAT CG-ACC TTTTTGTCATCCCAA TERM 2524 1807217 - 1807266 + g 70 -7.1 -4.13945 | gap 1, opp_overlap 1807198 1807250, overlap 1807218 CGATCGCCCGCTCAA CCGCCTGCGGGTTCAG-GTCGTTT ATC AAACAACGCTGTATCTGCTGGCGC TTTTCCGGTGCCAGT TERM 2525 1807218 - 1807265 + g 72 -10.6 -3.08046 | gap 1, opp_overlap 1807198 1807250, overlap 1807217 GATCGCCCGCTCAAC CGCCTGCGGGTTCAG-GTCGTTT ATC AAACAACGCTGTATCTGCTGGCG CTTTTCCGGTGCCAG selD 1808688 - 1807645 - | selenophosphate synthase ECS88_1815 1808779 - 1808630 - | hypothetical protein ydjA 1809356 - 1808805 - | putative oxidoreductase TERM 2526 1809100 - 1809122 + g 74 -7.6 -4.005 | overlap 1809103 GTTATGATGAGCGGT GCGCGGAACG GCG CATTACGCGC TTTGTCGATTGCTTT TERM 2527 1809527 - 1809546 + G 77 -2.8 -5.08824 | overlap 1809529 AATACATGCGAACCC TTTGGCGA TTTA TTGCCGGA TTTTTTAAATGGACG ECS88_1817 1809410 - 1809574 + | hypothetical protein TERM 2528 1810410 - 1810397 - gf 79 -2.4 -5.22039 | CCGAAATCGAAAAAA CTCT GACCAA AGAG TTCGGCTGGAGTAAA sppA 1809517 - 1811373 + | protease IV (signal peptide peptidase) TERM 2529 1811382 - 1811413 + F 85 -8.1 -4.65895 | gap 1, opp_overlap 1811386, overlap 1811383 1811385 1811386 GCGTTAAGTCTTGTA CTAA-GTGGCCGAC AGATC GTCGGCCACATTAC TTTTTACGTCGACGA TERM 2530 1811383 - 1811412 + F 83 -11.6 -3.39216 | gap 1, opp_overlap 1811386, overlap 1811382 1811385 1811386 CGTTAAGTCTTGTAC TAA-GTGGCCGAC AGATC GTCGGCCACATTA CTTTTTACGTCGACG TERM 2531 1811385 - 1811409 + F 91 -11.4 -3.83042 | opp_overlap 1811386, overlap 1811383 1811382 1811386 TTAAGTCTTGTACTA AGTGGCCGAC AGATC GTCGGCCACA TTACTTTTTACGTCG TERM 2532 1811408 - 1811386 - f 100 -15.6 -3.14881 | opp_overlap 1811385 1811383 1811382 1811386 TAAGTCTTGTACTAA GTGGCCGACA GAT CGTCGGCCAC ATTACTTTTTACGTC TERM 2533 1811386 - 1811408 + F 89 -14.9 -2.89102 | opp_overlap 1811386, overlap 1811385 1811383 1811382 TAAGTCTTGTACTAA GTGGCCGAC AGATC GTCGGCCAC ATTACTTTTTACGTC TERM 2534 1812319 - 1812293 - g 73 -3.7 -4.77173 | overlap 1812295 GCGCCACAAAACAAA GCCTTCCTGCA GGAAT TACAAGAAGCC AGCGATCGCGGTATT ansA 1811540 - 1812556 + | cytoplasmic L-asparaginase I pncA 1812567 - 1813208 + | nicotinamidase/pyrazinamidase TERM 2535 1813256 - 1813209 - T 74 -10.2 -3.23984 | gap 1, opp_overlap 1813247 GAAACGCAGGAGTAA TTTTACGCTGGCCTACAATTC TGTACTG GCATTGTAGGCCAG-ATAAAA CACATCAGTGATACA ydjE 1814659 - 1813301 - | putative transporter; MFS superfamily TERM 2536 1814170 - 1814148 - G 100 -4.8 -5.63103 | CGCCAACTAAAAAAA GCGATAACCA CCA CGCCTATCGC CGCAGACAGCATGGG TERM 2537 1814362 - 1814346 - G 74 -6.5 -4.44245 | overlap 1814337 1814334 ATATCAGGGACAAAA GCGGC CCCTGTT GCCGC AATACCGACGATGAG TERM 2538 1814694 - 1814715 + r 78 -10.2 -3.60538 | opp_overlap 1814694 1814693, overlap 1814692 AAAAAAGGTAGCAAT TGCGGCAA ATTCAC TTGCCGCA TCTTTATCATCATTT TERM 2539 1814715 - 1814694 - R 74 -10.9 -2.57863 | opp_overlap 1814692 1814694, overlap 1814693 AAAAAAGGTAGCAAT TGCGGCAAA TTCA CTTGCCGCA TCTTTATCATCATTT ydjF 1815535 - 1814777 - | putative DNA-binding transcriptional regulator ydjG 1816652 - 1815672 - | putative oxidoreductase; similar to aldo/keto reductase TERM 2540 1816244 - 1816227 - G 74 -3.3 -5.0133 | TATCGGCGTAAAAAA TGGCGGC ACCG ACTGCCA GTGCGTCATGTAGAT TERM 2541 1816416 - 1816430 + g 86 -4.2 -5.41143 | GGTTTCTACTACAAC CTGTTC ACG GGGCAG TTTTTTTAACGCCTG ydjH 1817609 - 1816662 - | putative sugar kinase ydjI 1818450 - 1817614 - | putative aldolase ydjJ 1819514 - 1818471 - | putative iditol dehydrogenase ydjK 1820910 - 1819531 - | putative transporter; MFS superfamily TERM 2542 1820217 - 1820229 + g 78 -9.1 -3.9093 | AAGGTTTACCCGTCT GGCGT ATG ACGCC TTCTTCTATACTCCG TERM 2543 1820882 - 1820892 + g 71 -2.4 -4.90002 | CGATCCAGCCGTGCA CCAC AAT GCGG TTTTGTTATCTGTTC ydjL 1822013 - 1820937 - | putative oxidoreductase, Zn-dependent and NAD(P)-binding TERM 2544 1821894 - 1821911 + g 77 -8.3 -4.08485 | GTGCTTCATGTCTGC GCCGCAG ATTG CCGCGGC TTTAATTTCAATCAC TERM 2545 1822130 - 1822085 - R 76 -10.7 -3.05844 | opp_overlap 1822072 1822090 1822099, overlap 1822090 1822091 1822099 TTTTTGAGGTCAACA TCAAATCTGTAAAACACAGAT AATG ATCTGCGTTTTACAACTTGGA TCACAATTACGCAGA TERM 2546 1822125 - 1822090 - R 79 -9.2 -3.93038 | opp_overlap 1822090 1822099, overlap 1822085 1822091 1822099 GAGGTCAACATCAAA TCTGTAAAACACAGAT AATG ATCTGCGTTTTACAAC TTGGATCACAATTAC TERM 2547 1822124 - 1822091 - R 82 -12.7 -2.95341 | opp_overlap 1822090 1822099, overlap 1822090 1822085 1822099 AGGTCAACATCAAAT CTGTAAAACACAGAT AATG ATCTGCGTTTTACAA CTTGGATCACAATTA TERM 2548 1822116 - 1822099 - R 70 -6.3 -4.17491 | opp_overlap 1822099 1822090, overlap 1822091 1822090 1822085 ATCAAATCTGTAAAA CACAGAT AATG ATCTGCG TTTTACAACTTGGAT yeaC 1822655 - 1822383 - | hypothetical protein msrB 1823110 - 1822697 - | methionine sulfoxide reductase B TERM 2549 1823380 - 1823396 + H 73 -2.9 -5.09245 | ATTGACACGATTCCG CTTGACG CTG CGTAAGG TTTTTGTAATTTTAC gapA 1823452 - 1824447 + | glyceraldehyde-3-phosphate dehydrogenase A TERM 2550 1824474 - 1824491 + F 100 -11.3 -5.82316 | opp_overlap 1824474 TCTGTGATCTAAAAA GAGCGAC TTCG GTCGCTC TTTTTTTTACCTGAT TERM 2551 1824491 - 1824474 - f 100 -11.3 -4.65895 | opp_overlap 1824474 TCTGTGATCTAAAAA GAGCGAC TTCG GTCGCTC TTTTTTTTACCTGAT TERM 2552 1824747 - 1824737 - g 81 -6.8 -4.59109 | CACACCGTTCAAAAA TGGC GTC GCCA TTCGCGGTGGCATAC yeaD 1824531 - 1825415 + | hypothetical protein yeaE 1826320 - 1825466 - | putative oxidoreductase TERM 2553 1826358 - 1826374 + r 91 -9.4 -4.82901 | opp_overlap 1826358 CACCGTAATGCAAAA CAGGGC ATGAC GCCCTG TTTTTATGCACAAAA TERM 2554 1826374 - 1826358 - R 85 -10.1 -4.2803 | opp_overlap 1826358 CACCGTAATGCAAAA CAGGGCA TGA CGCCCTG TTTTTATGCACAAAA mipA 1827156 - 1826410 - | scaffolding protein for murein synthesizing machinery TERM 2555 1828555 - 1828542 - g 72 -4.5 -4.72127 | TAATAACAAAAACAA CGAAG CCTT CCTCG ACCGTGTTTACATCG TERM 2556 1829416 - 1829405 - g 70 -5.8 -4.19238 | CGTTTAACGCCAAAA CGTC AACC GACG AGCAGAAGAAACACG yeaG 1827592 - 1829526 + | conserved hypothetical protein; putative nucleoside triphosphate hydrolase domain yeaH 1829639 - 1830922 + | hypothetical protein TERM 2557 1830928 - 1830954 + F 91 -9.4 -4.67755 | TAAAGACTAAAACTG TCAGCCGGGTCA TTA TCGCCTGGCTGA TTTTTAGCTCACTGT TERM 2558 1832508 - 1832488 - g 74 -7.5 -4.13872 | ACGGAAGCAGATAAA GCCTTACGC GAA GCGAAAAGC GAAGGGGGCAACAAA yeaI 1831069 - 1832544 + | putative diguanylate cyclase TERM 2559 1832562 - 1832580 + F 76 -8.1 -4.20106 | GCAAAAATATTCAGA GCCATGC TTTTT GCGTGGC TTTTGCATACAATTT TERM 2560 1833270 - 1833287 + F 71 -9.9 -3.06492 | GATGAATAACTGGTC CTTCCTG CAGT CAGGAAG TATTGGCATCGATCG TERM 2561 1834369 - 1834394 + G 78 -10.5 -3.53012 | gap 1, opp_overlap 1834364 GTAGGTAAATGTGAA GCGGTGTCA-GA AAT TCGTGGCACCGC TTTAGGCCAGGGGGC yeaK 1834258 - 1834761 + | hypothetical protein ECS88_1842 1834914 - 1834762 - | hypothetical protein yeaL 1835036 - 1835482 + | conserved hypothetical protein; putative inner membrane protein yeaM 1836260 - 1835439 - | putative DNA-binding transcriptional regulator TERM 2562 1835501 - 1835522 + g 93 -11.5 -4.1711 | opp_overlap 1835499, overlap 1835518 1835519 ATCCCGCAATATATC GGCCTGGCG TTTG CCCCAGGCC TTTCTTAAACATAGT yeaN 1836357 - 1837538 + | putative transporter; MFS superfamily TERM 2563 1837913 - 1837889 - g 86 -6.5 -5.1675 | gap 1 CTACTCAGCAAAAAA CACCA-CGCA GAACCA TGCGCTGGTG CTGGCAGACTGGCTA yeaO 1837593 - 1837940 + | hypothetical protein yoaF 1838216 - 1837962 - | conserved hypothetical protein; putative outer membrane protein yeaP 1838399 - 1839424 + | putative diguanylate cyclase TERM 2564 1839679 - 1839649 - T 79 -4.8 -5.1287 | gap 1, opp_overlap 1839656, overlap 1839651 1839652 GTCACATCTAAAAAA TAGCAAAGGCTGC CTGTGT GCAGCCTTTG-TG CAATTTACGCGTTAA TERM 2565 1839678 - 1839651 - T 84 -9.9 -4.19215 | opp_overlap 1839656, overlap 1839649 1839652 CACATCTAAAAAATA GCAAAGGCTGC CTGTGT GCAGCCTTTGT GCAATTTACGCGTTA TERM 2566 1839677 - 1839652 - T 86 -13.4 -3.10444 | opp_overlap 1839656, overlap 1839651 1839649 ACATCTAAAAAATAG CAAAGGCTGC CTGTGT GCAGCCTTTG TGCAATTTACGCGTT TERM 2567 1839656 - 1839673 + T 76 -8.4 -3.95219 | opp_overlap 1839652 1839651 1839649 CTAAAAAATAGCAAA GGCTGC CTGTGT GCAGCC TTTGTGCAATTTACG yeaQ 1839939 - 1839691 - | conserved hypothetical protein; putative inner membrane protein yoaG 1840269 - 1840087 - | hypothetical protein yeaR 1840632 - 1840273 - | hypothetical protein yeaS 1841443 - 1840805 - | putative neutral amino-acid efflux system TERM 2568 1841403 - 1841392 - G 79 -2.2 -5.29716 | CCAACACAATAAAAA TGGC CCCA ACCA GATAGGTCCAGTAAT TERM 2569 1841543 - 1841528 - R 74 -5.4 -4.64846 | TTAGAAAGGAGAAAA TCAGGT TTTA ACCCGA TATCAACCCGATAAT TERM 2570 1841940 - 1841983 + r 100 -20.4 -4.36262 | overlap 1841942 CTGTTGGATTTGTAG TTTGCCGAAGCCGGACTGAG CGCG CCCAGTCCGGCTTCGGAAGA TTTTACTGTGGATAT TERM 2571 1841942 - 1841981 + r 100 -20.8 -2.52138 | overlap 1841940 GTTGGATTTGTAGTT TGCCGAAGCCGGACTGAG CGCG CCCAGTCCGGCTTCGGAA GATTTTACTGTGGAT rnd 1843113 - 1841986 - | ribonuclease D TERM 2572 1843162 - 1843146 - R 100 -10.8 -5.75342 | opp_overlap 1843159, overlap 1843157 GGGCGTCAAAAAAAA CGCCGG ATTAA CCGGCG TCTGACGACTGACTT fadD 1844868 - 1843183 - | acyl-CoA synthetase (long-chain-fatty-acid--CoA ligase) TERM 2573 1843336 - 1843325 - G 70 -4.4 -4.57569 | opp_overlap 1843325 TGACGGCGGCAAAAA GTCA CCAG TGAC TCTTCGGTAAGCGAT TERM 2574 1843913 - 1843901 - G 72 -7.7 -3.91144 | opp_overlap 1843900 1843897, overlap 1843887 1843886 TGCAGACTGGAGAAA TCCAG CTG CTGGA ACTCTTTATTGTTCA TERM 2575 1845027 - 1845051 + r 100 -14.4 -5.27335 | opp_overlap 1845027 1845031, overlap 1845046 TACCGTAAGAATGCA GAAACAGCGG ACCGG CCGCTGTTTC TTTTTCTTTAAAAAC TERM 2576 1845051 - 1845027 - R 87 -14.4 -2.66106 | opp_overlap 1845027 1845046, overlap 1845031 TACCGTAAGAATGCA GAAACAGCGG ACCGG CCGCTGTTTC TTTTTCTTTAAAAAC TERM 2577 1845047 - 1845031 - R 81 -9.4 -4.02253 | opp_overlap 1845027 1845046, overlap 1845027 GTAAGAATGCAGAAA CAGCGG ACCGG CCGCTG TTTCTTTTTCTTTAA yeaY 1845654 - 1845073 - | putative outer membrane-associated lipoprotein yeaZ 1846389 - 1845694 - | putative peptidase yoaA 1848357 - 1846447 - | putative ATP-dependent helicase TERM 2578 1846969 - 1846958 - G 72 -4.4 -4.64846 | opp_overlap 1846958 GTACAAAGCATAAAA CAAC GACC GTTG TTAGCTTCGATGATC yoaB 1848489 - 1848833 + | hypothetical protein TERM 2579 1848905 - 1848879 - f 72 -9.5 -3.25668 | overlap 1848877 AATTTATCGATAATA CTGGTCGGTTT TACAT AAATCGACCAG AGATTAAGATATTAC yoaC 1849195 - 1849554 + | hypothetical protein TERM 2580 1849584 - 1849614 + T 100 -11.3 -4.84359 | AGCATAAATGGGTCA GGACGCTTTTAAT CACAT ATGAAAAGCGTCC TTTTTCTCACAATCA yoaH 1849853 - 1849674 - | hypothetical protein TERM 2581 1850641 - 1850654 + G 83 -5.2 -5.055 | AATCAGGCCAACCGC GCGC CGTTTA GCGC TTTTTTACGCCTTGA pabB 1849927 - 1851288 + | aminodeoxychorismate synthase, subunit I yeaB 1851292 - 1851870 + | putative NUDIX hydrolase TERM 2582 1852894 - 1852878 - g 73 -3.5 -4.79174 | opp_overlap 1852880, overlap 1852880 AGTTAACGAAGAAAA CGCCGCC GGT GGCCGTG TGGTAACTGCGCCAA sdaA 1852054 - 1853418 + | L-serine deaminase I TERM 2583 1853428 - 1853454 + F 100 -17.4 -4.19371 | GACTAATACTTCTTA TTCGCCCATCTG CAA CGGATGGGCGAA TTTATTCCCGCTTTC TERM 2584 1855110 - 1855076 - g 100 -14.9 -3.54424 | opp_overlap 1855106 TGTGATTTTCCCAAA TGGCTGGCGGGCAGC CAACC GCCGCCCGCCCGGCA TAATGGACATATCAC adrB 1853549 - 1855147 + | putative cyclic di-GMP phosphodiesterase yoaE 1856707 - 1855151 - | putative membrane protein fused with conserved domain TERM 2585 1855537 - 1855526 - G 72 -5.8 -4.35483 | GGTCACGATAACAAA GCTC CCGC GAGC ACGACGCAGCACGCC TERM 2586 1856925 - 1856902 - H 71 -8.2 -3.72678 | opp_overlap 1856906 TAAACAGGAGTTAAA CATATCAGAG ACGC CTCTGATTTG GCAAAGATTTACCTT TERM 2587 1857603 - 1857578 - g 88 -8.9 -4.58685 | AAACCGGTTGAAAAA GCCGCGCCAGC ACCC GCTACCGCAGC ACCAAAAGCGGCTCC manX 1857170 - 1858141 + | fused mannose-specific PTS enzymes: IIA component ; IIB component manY 1858204 - 1859004 + | mannose-specific enzyme IIC component of PTS TERM 2588 1859067 - 1859053 - g 82 -2.8 -5.28778 | opp_overlap 1859054, overlap 1859054 ACCACCGAGAAAAAA CTCACT CAA AGTGAT ATTCGTGGCGTCTTC manZ 1859008 - 1859868 + | mannose-specific enzyme IID component of PTS TERM 2589 1859903 - 1859884 - f 74 -10.6 -2.62396 | opp_overlap 1859885 GACTGTTGTACACTA CCGGGGCC TTTT GGCCCCGT TTTTTTATCTGGAGG TERM 2590 1859885 - 1859902 + F 100 -14.1 -5.71712 | opp_overlap 1859884 ACTGTTGTACACTAC CGGGGCC TTTT GGCCCCG TTTTTTTATCTGGAG yobD 1859923 - 1860381 + | conserved hypothetical protein; putative inner membrane protein TERM 2591 1860392 - 1860443 + F 72 -9.8 -3.1577 | gap 1, opp_overlap 1860390 1860394, overlap 1860390 1860392 AATAAGTTATGAATT TAGCCAAAGCTATGTTTAGTGTATT TTT AATA-ATCAGACATAGCTTAGGCTA TATTACCTCTTCCCT yebN 1860810 - 1861376 + | conserved hypothetical protein; putative inner membrane protein rrmA 1862182 - 1861373 - | 23S rRNA m1G745 methyltransferase TERM 2592 1862305 - 1862275 - R 73 -9.1 -3.51271 | opp_overlap 1862281, overlap 1862281 GAAGATAAAACAAAG TAAAAAGCCTCGC ATTCG ACGAGGCTTTATA GCGAGATTGAAGCGT TERM 2593 1862281 - 1862299 + r 70 -7.4 -3.86822 | opp_overlap 1862275 1862281 AAAACAAAGTAAAAA GCCTCG CATTCGA CGAGGC TTTATAGCGAGATTG TERM 2594 1862299 - 1862281 - R 87 -8.1 -5.1517 | opp_overlap 1862281, overlap 1862275 AAAACAAAGTAAAAA GCCTCGC ATTCG ACGAGGC TTTATAGCGAGATTG TERM 2595 1862371 - 1862355 - R 70 -9.5 -2.94747 | opp_overlap 1862346 GGATTCGATCAGATA GCTGTTA CGT TAACAGC TGCCGGACCTTTCTG cspC 1862557 - 1862348 - | stress protein, member of the CspA-family yobF 1862713 - 1862570 - | hypothetical protein TERM 2596 1863370 - 1863339 - R 72 -9.6 -3.25729 | gap 1, opp_overlap 1863346 TATAATCAGCATGAA TTGAGTAAC-CCTTC AAC GACGGGGTTACTCAA GATTGAGGAAGGATT yebO 1863671 - 1863384 - | hypothetical protein yobG 1863889 - 1863746 - | hypothetical protein yobH 1864048 - 1864287 + | hypothetical protein TERM 2597 1864391 - 1864421 + T 83 -11.3 -3.29471 | opp_overlap 1864391, overlap 1864394 CTCATGCTAAATAAA GAACCTGTCTG TTTGATATT CAGACAGGTTC TTACTCTCATCAGAA TERM 2598 1864421 - 1864391 - T 93 -11.3 -4.44046 | opp_overlap 1864391 1864394 CTCATGCTAAATAAA GAACCTGTCTG TTTGATATT CAGACAGGTTC TTACTCTCATCAGAA kdgR 1865222 - 1864431 - | DNA-binding transcriptional repressor KdgR yebQ 1865399 - 1866772 + | putative transporter; MFS superfamily TERM 2599 1866772 - 1866803 + T 79 -11.7 -2.74026 | opp_overlap 1866778, overlap 1866778 ACGATCCAGGGCATA AAAAAAGCGCGTC GATCAG GACGCGCTTTTTA GTATTTACTTCATAT TERM 2600 1866778 - 1866797 + T 100 -10.7 -4.946 | opp_overlap 1866778, overlap 1866772 CAGGGCATAAAAAAA GCGCGTC GATCAG GACGCGC TTTTTAGTATTTACT TERM 2601 1866797 - 1866778 - T 100 -10.7 -5.626 | opp_overlap 1866778 1866772 CAGGGCATAAAAAAA GCGCGTC GATCAG GACGCGC TTTTTAGTATTTACT htpX 1867699 - 1866818 - | membrane-associated Zn-dependent endopeptidase; self-cleaved TERM 2602 1867739 - 1867729 - R 79 -6.8 -4.65916 | opp_overlap 1867736, overlap 1867731 1867736 1867737 CTCAGTTTAACAAAA CGCA ATA TGCG ATACCCACATCGTAT TERM 2603 1867884 - 1867861 - R 100 -14 -5.00616 | opp_overlap 1867861 GCCGCTGTTAAAAAA TCAGGCACAA TTTC TTGTGCCTGA TTGATATTACTTGAC TERM 2604 1867861 - 1867884 + r 100 -14 -3.42147 | opp_overlap 1867861 GCCGCTGTTAAAAAA TCAGGCACAA TTTC TTGTGCCTGA TTGATATTACTTGAC prc 1869939 - 1867891 - | carboxy-terminal protease for penicillin-binding protein 3 TERM 2605 1868363 - 1868373 + g 72 -8.2 -3.77219 | GGCATGATGATGTCT GGCG TTA CGCC TTTACGTTGCGTACT TERM 2606 1869514 - 1869532 + g 74 -8.1 -4.13767 | GTTATAAGTGTCGTT GCCGGTG AAATC CATCGGC TTTTCCAGTACCGAC TERM 2607 1869587 - 1869572 - G 77 -8.2 -4.14392 | opp_overlap 1869572 1869571, overlap 1869573 TGGTAACGTTCAAAA CGGCGC TTTT GCGCCA GATTGTAGAGATCGT proQ 1870657 - 1869959 - | ProP transporter amplifier TERM 2608 1870249 - 1870261 + g 70 -6.9 -4.06419 | overlap 1870214 GTGGCTTGCGTTCGC GGCGC GGT GCGTC TTCTTTCTCACCAGC yebR 1871305 - 1870754 - | hypothetical protein TERM 2609 1871323 - 1871299 - G 72 -6.6 -4.26903 | opp_overlap 1871302 GCCAGCCTATTAAAA TAAGCATTAA ATGCG TTAATGCTCA AGATCATTCCCATCA TERM 2610 1871620 - 1871642 + GH 72 -9.8 -3.14125 | overlap 1871617 CATGCTGTTGCTTAT GCCGTTTGCC TGG GGCGAACCGC TGTTGCATATCTGGC TERM 2611 1872466 - 1872484 + GH 78 -8.8 -4.08111 | overlap 1872468 GACCTGGATTGGTCG CTGGTCGA TGC TCGACCTG TTTGTCATATCTTTA TERM 2612 1872468 - 1872482 + GH 78 -10 -3.61777 | overlap 1872466 CCTGGATTGGTCGCT GGTCGA TGC TCGACC TGTTTGTCATATCTT yebS 1871381 - 1872664 + | conserved hypothetical protein; putative inner membrane protein TERM 2613 1873497 - 1873485 - gf 79 -4.8 -4.89477 | overlap 1873487 GGCGTAATAATAAAA CTGG AACTG CCAG GCGGTGCCGGATTAA yebT 1872633 - 1875266 + | hypothetical protein TERM 2614 1875274 - 1875299 + F 100 -14.7 -3.9712 | opp_overlap 1875268, overlap 1875275 CCAAATAATGCCCAC TGCTCCGGCGT GCCT GCGCCGGAGCG TTTATGCTAAACTGC TERM 2615 1875275 - 1875298 + F 100 -16 -2.97951 | opp_overlap 1875268, overlap 1875274 CAAATAATGCCCACT GCTCCGGCGT GCCT GCGCCGGAGC GTTTATGCTAAACTG TERM 2616 1875855 - 1875866 + G 70 -5.8 -4.25283 | TGGCATCAGTAATGT TGCG CTCA CGCA TTTTGATGGCCGCGT TERM 2617 1875991 - 1875981 - g 86 -6.8 -5.02074 | CGATGCGCTAAAAAA CTGG TCA CCAG AAAGCAATCAGGAAA yebU 1875346 - 1876785 + | putative RNA AdoMet-dependent methyltransferase TERM 2618 1876917 - 1876928 + G 70 -7.2 -4.13767 | GATGAAAACCAGTGT GCGC ATAG GCGC TTTTGAAATCGACGA TERM 2619 1876968 - 1876956 - g 71 -10.5 -2.90723 | CGACGGCGAATTACA CGGCG AAT CGCCG GGTGATCGAACGTTA yebV 1876903 - 1877139 + | hypothetical protein TERM 2620 1877151 - 1877167 + F 74 -7.9 -4.07535 | opp_overlap 1877148 1877151 CTGATCCAAAAAGAA CCCGTCG GCA TGGCGGG TTATTTGTCCGGGTT TERM 2621 1877167 - 1877151 - f 71 -5 -4.44608 | opp_overlap 1877151, overlap 1877148 CTGATCCAAAAAGAA CCCGTC GGCAT GGCGGG TTATTTGTCCGGGTT TERM 2622 1877357 - 1877368 + G 72 -7.2 -4.21933 | opp_overlap 1877356 GAGCGATCAACGGAT CCGC CATG GCGG TTGTTTTCCGATTGA yebW 1877160 - 1877435 + | hypothetical protein pphA 1878092 - 1877436 - | serine/threonine-specific protein phosphatase 1 TERM 2623 1878261 - 1878232 - R 79 -5.1 -5.10064 | gap 1, overlap 1878234 TTTAACAGATAAAAA GAGACCGAACAC GATTCCT GTATTCGGTC-C AGGGAAATGGCTCTT TERM 2624 1878260 - 1878234 - R 80 -8.8 -4.16832 | overlap 1878232 TAACAGATAAAAAGA GACCGAACAC GATTCCT GTATTCGGTC CAGGGAAATGGCTCT ECS88_1892 1878469 - 1878317 - | hypothetical protein TERM 2625 1878451 - 1878422 - G 75 -5.1 -4.70879 | gap 2, opp_overlap 1878422 CTTAAATGTTAAAAA CCGCC-C-GTTCT GGTGAA AGAACTGAGGCGG TTTTTTATTGGAAAT TERM 2626 1878422 - 1878451 + g 91 -5.1 -5.45652 | gap 2, opp_overlap 1878422 CTTAAATGTTAAAAA CCGCC-C-GTTCT GGTGAA AGAACTGAGGCGG TTTTTTATTGGAAAT yebY 1878828 - 1878487 - | hypothetical protein yebZ 1879713 - 1878841 - | conserved hypothetical protein; putative inner membrane protein TERM 2627 1879613 - 1879589 - G 74 -6.4 -4.51196 | opp_overlap 1879592 TGTAAACGCAGAAAA CGCTTCGTCA GCAAG CGACGAATCG TTAAGGGGGCCAGCC TERM 2628 1879694 - 1879684 - G 70 -6.8 -4.02132 | GGTGAAATGGATAAA TCGC AGC GCGA TCCAGGTAAACGCCA yobA 1880091 - 1879717 - | hypothetical protein holE 1880230 - 1880460 + | DNA polymerase III, theta subunit yobB 1880562 - 1881218 + | hypothetical protein TERM 2629 1881280 - 1881266 - g 70 -7.1 -4.1399 | overlap 1881262 TTATCGATACAGAAA CCTGC GGTTT GCAGG GAGGGATCGTAGAGA exoX 1881241 - 1881903 + | DNA exonuclease X ptrB 1883960 - 1881900 - | protease II TERM 2630 1883194 - 1883178 - G 71 -2.2 -4.97405 | gap 1, opp_overlap 1883179, overlap 1883179 AGGCAGAAAAACAAA CGGCTCG GCAT CG-GCCA TTTCCGCGTCCAGCA TERM 2631 1883596 - 1883586 - G 75 -5.4 -4.67982 | opp_overlap 1883594 GCCCATCGAATAAAA CTCA CTA TGAG CCGCGCGCTTGTTGG yebE 1884828 - 1884169 - | conserved hypothetical protein; putative inner membrane protein TERM 2632 1884575 - 1884587 + g 74 -3.3 -4.88684 | overlap 1884575 TGCGGTTCATCCTGA TGCGC CGC GCGAA TTTTATCTTTGTATT yebF 1885523 - 1885155 - | hypothetical protein TERM 2633 1885338 - 1885350 + g 75 -4.7 -4.73613 | overlap 1885339 TTGATCATCAGCCCA GCGCG CCA CGCGA TTTTGTTGGTAATCA yebG 1885868 - 1885578 - | conserved hypothetical protein regulated by LexA purT 1886002 - 1887180 + | phosphoribosylglycinamide formyltransferase 2 TERM 2634 1887234 - 1887195 - T 72 -3.1 -5.01732 | gap 3, opp_overlap 1887206, overlap 1887206 AACCCGGCCAAAAAA CGCTACAAAAATGCCCGATC CTC GATCGGGCATTTT-G-A-CT TTTACAGCTTAGCGC TERM 2635 1887206 - 1887226 + T 100 -15.5 -4.4267 | opp_overlap 1887206 1887195 AAAACGCTACAAAAA TGCCCGATC CTC GATCGGGCA TTTTGACTTTTACAG TERM 2636 1887226 - 1887206 - T 100 -15.5 -4.90296 | opp_overlap 1887206, overlap 1887195 AAAACGCTACAAAAA TGCCCGATC CTC GATCGGGCA TTTTGACTTTTACAG eda 1887877 - 1887236 - | multifunctional 2-keto-3-deoxygluconate 6-phosphate aldolase and 2-keto-4-hydroxyglutarate aldolase and oxaloacetate decarboxylase TERM 2637 1887832 - 1887820 - G 71 -9.1 -3.44051 | opp_overlap 1887828 1887829, overlap 1887829 TTTTTACCACGATAA CCGGT ACA ACCGG GCCGGTGGTCAGGAT TERM 2638 1887938 - 1887955 + rH 82 -7.7 -4.56597 | GATACAGGTTGCGCC CTGTTCG GCAC CGGACAG TTTTTCACGCAAGGC edd 1889725 - 1887914 - | 6-phosphogluconate dehydratase TERM 2639 1888405 - 1888425 + gH 76 -7.5 -4.2558 | overlap 1888406 CTTCAATCACCTGGT TCTCTACCG GCA CGGCAGAGG TTTTCATAACCGCTC ECS88_1908 1889688 - 1889846 + | hypothetical protein TERM 2640 1889880 - 1889855 - TR 100 -11.2 -5.80364 | gap 1 AGTGTAATAAAAAAA GCCTCGTG-GG TGAAT CCGCACGAGGC CTGAAAGTGTAAAAA zwf 1891435 - 1889960 - | glucose-6-phosphate dehydrogenase TERM 2641 1891395 - 1891361 - G 89 -13.6 -3.22388 | overlap 1891365 CAGGGAAGGCAGCAA TTTACGACGCGCAAGG TCG CCTTTCGCGCCGAAAA TGACCAGGTCACAGG TERM 2642 1891391 - 1891365 - G 90 -14.4 -2.57721 | overlap 1891361 GAAGGCAGCAATTTA CGACGCGCAAGG TCG CCTTTCGCGCCG AAAATGACCAGGTCA TERM 2643 1891807 - 1891792 - g 81 -4.7 -5.02476 | overlap 1891781 ATATGCTGGAAAAAA TCCAG TCTCAG CTGGA ACATTTGAGCAAATC yebK 1891773 - 1892642 + | putative DNA-binding transcriptional regulator TERM 2644 1892655 - 1892629 - f 74 -10.2 -3.19371 | opp_overlap 1892629, overlap 1892615 AGTTACTTAATTTAA GTGACGATCGCT AAA AACGATTGTCAC TGTCCTAATCTTATA TERM 2645 1892629 - 1892655 + F 72 -10.2 -2.87146 | opp_overlap 1892615 1892629 AGTTACTTAATTTAA GTGACGATCGCT AAA AACGATTGTCAC TGTCCTAATCTTATA TERM 2646 1893108 - 1893097 - g 95 -5.8 -5.38054 | GGCGACAAAGAAAAA GTCG GTAT CGAC TACAAAGGCCTGCCT pykA 1892770 - 1894212 + | pyruvate kinase II TERM 2647 1894258 - 1894213 - T 71 -9 -3.27994 | gap 2, opp_overlap 1894216, overlap 1894216 TTAACGGTAGAGTAA GTAC-GTTG-CCGGATGCGGCG AAAA CGCCTCATCCGGCCTACAGTTC AATGATAATTCAACA TERM 2648 1894254 - 1894216 - T 79 -11.7 -2.81725 | gap 1, opp_overlap 1894216, overlap 1894213 ACGGTAGAGTAAGTA CGTTG-CCGGATGCGGCG AAAA CGCCTCATCCGGCCTACA GTTCAATGATAATTC TERM 2649 1894319 - 1894339 + T 100 -6.8 -5.68438 | overlap 1894320 TTATCATCAGTCGAA GGCCTCTC CTCGC GAGAGGCA TTTTTTATTTGATGG TERM 2650 1894320 - 1894338 + T 82 -10.3 -3.99436 | overlap 1894319 TATCATCAGTCGAAG GCCTCTC CTCGC GAGAGGC ATTTTTTATTTGATG lpxM 1895315 - 1894344 - | myristoyl-acyl carrier protein (ACP)-dependent acyltransferase TERM 2651 1894826 - 1894814 - G 79 -4.7 -4.9755 | opp_overlap 1894814 AGACATAATCAAAAA CCGGG TTG CCCTG ATTATGGAACATCGC TERM 2652 1895417 - 1895395 - R 100 -10.6 -5.68438 | GCACCAAATAAAAAA GCCGGTAC TGACTGC GTACCGGC TGCGAATGGATGTTA yebA 1896756 - 1895434 - | putative metallopeptidase TERM 2653 1896135 - 1896151 + g 81 -10.1 -3.87815 | opp_overlap 1896146, overlap 1896122 CTGCGCTCACTTCGG CGCTGGT TAA ACCGGCG TTTCTGGCGCTGGCA znuA 1897704 - 1896772 - | zinc transporter subunit: periplasmic-binding component of ABC superfamily TERM 2654 1897048 - 1897059 + g 72 -4.4 -4.59773 | ATGACCAAGCGGTGT CAGT CCGA ACTG TTTTTCGAAGTAGCC TERM 2655 1897300 - 1897313 + g 77 -3.1 -5.03715 | overlap 1897289 1897298 GAAATCGCCGTGATG GTGAT CTTC GTCAC TTTTTTCCGCGTGAT TERM 2656 1897413 - 1897431 + g 75 -5.3 -4.65895 | TTACCTGTTTCGCTT CTGGTAA TTTAC TTACCGG TTTTTGCATGAACGC znuC 1897783 - 1898538 + | zinc transporter subunit: ATP-binding component of ABC superfamily znuB 1898535 - 1899320 + | zinc transporter subunit: membrane component of ABC superfamily TERM 2657 1899339 - 1899370 + T 85 -10.8 -3.76568 | overlap 1899340 TTCGCTGAACATATT TGTCGGATGCGGCG CGAG CGCCTTATCCGACC TTGTATTATCCCTCC TERM 2658 1899340 - 1899369 + T 89 -14.3 -2.85459 | overlap 1899339 TCGCTGAACATATTT GTCGGATGCGGCG CGAG CGCCTTATCCGAC CTTGTATTATCCCTC TERM 2659 1899520 - 1899482 - T 76 -10.2 -3.27771 | overlap 1899474 1899480 CTGATAAGACGAACA GCGTCGCATCAGGCAC ACTGCCA GTGTCGGATGCGGCGC GAGCGACCAATCCGA ruvB 1900547 - 1899537 - | ATP-dependent DNA helicase, component of RuvABC resolvasome TERM 2660 1900202 - 1900173 - G 86 -12.3 -3.48593 | gap 1, opp_overlap 1900171 CATTGCCGGATACAA CACC-TCTTCCACC ACT GGTGAAAGACGGTG GATCTCATCAATAAA ruvA 1901167 - 1900556 - | component of RuvABC resolvasome, regulatory subunit TERM 2661 1901236 - 1901217 - H 100 -6.4 -5.67063 | overlap 1901218 TGTATGATAAAAAAA TGCTGGAT AGAT ATCCAGCG AAGGATGAAGAAAAC TERM 2662 1901235 - 1901218 - H 81 -9.9 -3.99153 | overlap 1901217 GTATGATAAAAAAAT GCTGGAT AGAT ATCCAGC GAAGGATGAAGAAAA TERM 2663 1901400 - 1901390 - H 79 -2.6 -5.40072 | opp_overlap 1901390 GCCCCCTGAAAAAAA TAAA TTT TTTA TGCTATTACGTATAT TERM 2664 1901725 - 1901713 - g 85 -3.4 -5.35721 | ACAGAACAACAAAAA CAAC GAATT GTTG AACAGGTTCCCTCCC TERM 2665 1902039 - 1902014 - g 77 -10.4 -3.59979 | opp_overlap 1902030 CGGTGGGAGTTGAAA CGCCTCAGCC TGAACT GACCGAGGCG GTATAACTTAACGCA yebB 1901443 - 1902045 + | hypothetical protein ruvC 1902568 - 1902047 - | component of RuvABC resolvasome, endonuclease TERM 2666 1902181 - 1902210 + g 86 -7.1 -5.02074 | opp_overlap 1902185 TAGCGGGCAGTTTCA GCAAGGTGCGG ACCATATG CTGCACCTGGC TTTTTTCGGCACTAC yebC 1903343 - 1902603 - | hypothetical protein nudB 1903815 - 1903372 - | dATP pyrophosphohydrolase aspS 1905589 - 1903817 - | aspartyl-tRNA synthetase TERM 2667 1905935 - 1905921 - g 72 -7.1 -4.20354 | opp_overlap 1905921 1905921 1905922 AACTTAATGCTAAAA CCACC GCGCT GGTGG TGATTGATTTACAAG yecD 1905899 - 1906465 + | putative hydrolase TERM 2668 1906553 - 1906573 + G 74 -8.2 -3.89346 | CCCGCAACTTTAACT GCGTGGAG GGTAA CACCACGC TTTATGCCCTGCCGA yecE 1906462 - 1907280 + | hypothetical protein TERM 2669 1907416 - 1907439 + G 88 -11 -4.08767 | gap 1, opp_overlap 1907413 CCTGCGAATGCAGTA CCG-CGTTGCC TAT GGCGACGGCGG TTTTAGCGAACTGCA yecN 1907333 - 1907728 + | conserved hypothetical protein; putative inner membrane protein yecO 1907769 - 1908512 + | AdoMet-dependent methyltransferase yecP 1908509 - 1909480 + | hypothetical protein TERM 2670 1909617 - 1909634 + T 100 -14.1 -4.20712 | opp_overlap 1909613 GTTTGCATAACCTCA GCGCCCG TTTC CGGGCGC TTTTCACGTCTTATG torZ 1912074 - 1909645 - | trimethylamine N-oxide reductase system III, catalytic subunit TERM 2671 1911338 - 1911351 + g 74 -2.3 -5.06451 | opp_overlap 1911330 1911339, overlap 1911330 1911339 GGATCAATGGCAATC ACTGG TTTG CCAGA TTTTTTCAGCTGATG torY 1913199 - 1912099 - | TMAO reductase III (TorYZ), cytochrome c-type subunit TERM 2672 1913539 - 1913515 - R 100 -10 -5.64274 | TCAGGGATAAAAAAA GGCCCCTG TTGAAATTG CAGGGGCC TGGTACGAGCAAGCA cutC 1914333 - 1913587 - | copper homeostasis protein yecM 1914913 - 1914347 - | putative metal-binding enzyme TERM 2673 1915088 - 1915106 + H 78 -11 -3.20382 | ATTTCTTTAACTGGT GCGGGCAA TTT TTGCTCGC TTCATCAATGTAAGG TERM 2674 1915189 - 1915210 + G 70 -10.1 -3.18264 | ATTGCGGCAGGCGCG CCTGCGGAT TGCG AACCGCAGG TTCGTCAGTCAGCAA TERM 2675 1916449 - 1916439 - g 70 -4.6 -4.57569 | overlap 1916421 GGATCTCTCCAAAAA CCGC ACC ACGG ACTACATCTTCGACT argS 1915129 - 1916862 + | arginyl-tRNA synthetase TERM 2676 1916904 - 1916881 - T 83 -12.5 -3.07962 | opp_overlap 1916872 1916881 CGTTATACGGCAACA GCCGATGTC ATTGCA GACATCGGC TTTTTTATCATTAAC TERM 2677 1916881 - 1916904 + T 100 -12.5 -5.37345 | opp_overlap 1916881, overlap 1916872 CGTTATACGGCAACA GCCGATGTC ATTGCA GACATCGGC TTTTTTATCATTAAC flhE 1917307 - 1916915 - | hypothetical protein flhA 1919385 - 1917307 - | putative flagellar export pore protein flhB 1920526 - 1919378 - | flagellar export pore protein TERM 2678 1919429 - 1919409 - G 72 -4.6 -4.63218 | opp_overlap 1919415 TTCTCGTTAATAAAA TCCAGGGC TTCCG GCACCGGA AGATGTGTAGGTTGT TERM 2679 1919857 - 1919873 + g 72 -4.3 -4.62783 | CATCACGAATATCCT GCCGTGA CAT TCGCAGC TTTTTCAGGTGGCTG TERM 2680 1920443 - 1920469 + g 71 -2.2 -4.9218 | opp_overlap 1920433, overlap 1920444 AGTCAGTTCACGGGA ACGCGGGA TTTGCCCCTCT TCCCGCGC TTTTTCTAGTCGGTG TERM 2681 1920725 - 1920696 - R 79 -11.5 -3.0644 | ATCCAACCTTGAAGA TCTGATGTGACGC GGCC ACGTCACATCAGG CAATACAAATCAAAA cheZ 1921379 - 1920735 - | chemotaxis regulator, protein phosphatase for CheY TERM 2682 1921310 - 1921288 - G 74 -9.8 -3.53811 | overlap 1921303 CCCAGCTCCCGCAAA CTGTCGCGCA GCA TACGCGTCAG GCTGCCGATGCGCGC cheY 1921779 - 1921390 - | chemotaxis regulator transmitting signal to flagellar motor component cheB 1922843 - 1921794 - | fused chemotaxis regulator ; protein-glutamate methylesterase in two-component regulatory system with CheA cheR 1923706 - 1922846 - | chemotaxis regulator, protein-glutamate methyltransferase tar 1925658 - 1923997 - | methyl-accepting chemotaxis protein II TERM 2683 1924388 - 1924419 + g 74 -7.4 -4.10657 | gap 1 CCGGTATCAACGCGC GAGA-CGGAGTCTTC AAT GAGGACTTTGATCTC TTTTGCCGCCTGTGC TERM 2684 1924903 - 1924880 - G 73 -9.6 -3.64822 | opp_overlap 1924853, overlap 1924899 ACGGTGTCAGTCAAA GAGCGTTGCA TATG TGAAACGCTC TGCGCCAGGTCGCCC TERM 2685 1925754 - 1925774 + r 72 -8.3 -3.57106 | opp_overlap 1925754, overlap 1925750 AATTGAAATAAAAAA CCCGATG CGCAGAT CATCGGG TTCATTTCAATTGAG TERM 2686 1925774 - 1925754 - R 100 -8.3 -5.67283 | opp_overlap 1925754 1925750 AATTGAAATAAAAAA CCCGATG CGCAGAT CATCGGG TTCATTTCAATTGAG cheW 1926306 - 1925803 - | purine-binding chemotaxis protein TERM 2687 1925849 - 1925859 + g 71 -3.2 -4.74706 | opp_overlap 1925833 AGCGCCATCTCTTCG CTGT TCA GCAG TTTTTCGATGTTCAC cheA 1928291 - 1926327 - | fused chemotactic sensory histidine kinase in two-component regulatory system with CheB and CheY: sensory histidine kinase ; signal sensing protein TERM 2688 1926516 - 1926532 + g 72 -7.9 -3.89346 | opp_overlap 1926513 1926514 ATCCACCAGCAAGGC GTAGCGG CGA CCGCCAC TTTGTAAGATCACCA TERM 2689 1927882 - 1927904 + g 76 -11.2 -3.41527 | overlap 1927888 CTTAATCGGGTCACT GCGGATGGCG TTT CGCCTTTCGC TTCTAATGCCAGTTG TERM 2690 1927888 - 1927898 + g 72 -8.2 -3.82083 | overlap 1927882 CGGGTCACTGCGGAT GGCG TTT CGCC TTTCGCTTCTAATGC motB 1929222 - 1928296 - | protein that enables flagellar motor rotation TERM 2691 1928334 - 1928352 + g 85 -8.8 -4.56775 | TTGTGGGAACACTGA CCTGTGGT GCA ACCTCAGG TTTTTCCAGGGCGCT motA 1930106 - 1929219 - | proton conductor component of flagella motor TERM 2692 1930206 - 1930183 - R 100 -12.5 -4.65933 | opp_overlap 1930179 TAGGGGCAAAAGAAA GCAGCGGTA CATCGT TACCGCTGC TGGAATGTTTCGCCA flhC 1930811 - 1930233 - | DNA-binding transcriptional dual regulator with FlhD flhD 1931173 - 1930814 - | DNA-binding transcriptional dual regulator with FlhC TERM 2693 1931443 - 1931424 - H 77 -9.4 -3.63515 | TGCGATTTTCAATAA TGTGTGAT GCAG ATCACACA AAACGCTCAATTACT TERM 2694 1932286 - 1932319 + G 85 -14.1 -2.75382 | gap 1, opp_overlap 1932284, overlap 1932283 AATCACAATCACAGT TTCTTTTCGC-GAGCA TCC TGCTCGGCGAAAAGAG TGATTACCTCAAGTG yecG 1931944 - 1932372 + | universal stress protein otsA 1933803 - 1932379 - | trehalose-6-phosphate synthase otsB 1934578 - 1933778 - | trehalose-6-phosphate phosphatase, biosynthetic TERM 2695 1934012 - 1933999 - GR 75 -9.5 -3.5241 | overlap 1933986 1933997 CATCGCCCAGAAATA CGGGC GTTC GCCCG ATAAAGGGAGCTTCC TERM 2696 1934706 - 1934681 - R 100 -12.6 -3.81414 | opp_overlap 1934683 ATTTGCAACGAAGAA CAGCCAACCG TTGTGG CGGCTGGCTG TGGTGGGAAAAAATG araH 1935734 - 1934745 - | fused L-arabinose transporter subunits of ABC superfamily: membrane components araG 1937260 - 1935746 - | fused L-arabinose transporter subunits of ABC superfamily: ATP-binding components TERM 2697 1937290 - 1937316 + r 93 -10.8 -4.57341 | overlap 1937291 1937292 TCACTGGTCGTTCAC ACCCCCTCTGCA TCA TGCAGAGGGGAA TTTTTCCGGCAAATT TERM 2698 1937291 - 1937315 + r 100 -14.3 -3.33922 | overlap 1937290 1937292 CACTGGTCGTTCACA CCCCCTCTGCA TCA TGCAGAGGGGA ATTTTTCCGGCAAAT TERM 2699 1937292 - 1937314 + r 100 -17.8 -2.60032 | overlap 1937291 1937290 ACTGGTCGTTCACAC CCCCTCTGCA TCA TGCAGAGGGG AATTTTTCCGGCAAA araF 1938319 - 1937330 - | L-arabinose transporter subunit ; periplasmic-binding component of ABC superfamily TERM 2700 1938373 - 1938361 - H 78 -6.3 -4.62069 | opp_overlap 1938361 TGTGTAGGGCAAAAA CGAAT GAC ATTCG TTAAATTAATCGGAA yecI 1939116 - 1939619 + | putative ferritin-like protein TERM 2701 1939621 - 1939653 + T 100 -12 -4.56597 | overlap 1939623 ATCAGCTACATTGAT CATCATCGGCGCTA ATGCA TTGCGCCGATGAAG TTTTTGAGAAACCGC TERM 2702 1939623 - 1939651 + T 84 -13.2 -2.60032 | overlap 1939621 CAGCTACATTGATCA TCATCGGCGCTA ATGCA TTGCGCCGATGA AGTTTTTGAGAAACC TERM 2703 1939692 - 1939665 - T 100 -13.5 -3.86822 | opp_overlap 1939665 GAAGTTTTTGAGAAA CCGCTGCCTCA TTTTTT TGAAGCAGCGG TTTTTTAATGGGATT TERM 2704 1939665 - 1939692 + T 100 -11.3 -5.16237 | opp_overlap 1939665 GAAGTTTTTGAGAAA CCGCTGCCTCA TTTTTT TGAAGCAGCGG TTTTTTAATGGGATT yecJ 1939948 - 1939697 - | hypothetical protein TERM 2705 1940062 - 1940034 - H 72 -9.8 -3.27653 | gap 1, opp_overlap 1940035 1940042, overlap 1940042 ACCGTCATCAGAACA CAAAAAAACCTGC CGGA GCAGG-TTTTTTG TTATCGGAACATATT TERM 2706 1940035 - 1940062 + H 76 -10 -3.30007 | opp_overlap 1940034 1940042, overlap 1940042 CCGTCATCAGAACAC AAAAAAACCTGC CGGA GCAGGTTTTTTG TTATCGGAACATATT TERM 2707 1940042 - 1940055 + H 100 -8.1 -5.55769 | opp_overlap 1940034 1940042, overlap 1940035 CAGAACACAAAAAAA CCTGC CGGA GCAGG TTTTTTGTTATCGGA TERM 2708 1940055 - 1940042 - H 100 -8.1 -5.84432 | opp_overlap 1940042 1940035, overlap 1940034 CAGAACACAAAAAAA CCTGC CGGA GCAGG TTTTTTGTTATCGGA ECS88_1959 1940060 - 1940206 + | hypothetical protein TERM 2709 1940253 - 1940226 - f 70 -7.2 -3.89607 | overlap 1940213 1940211 1940210 CATCACAAAAATCAA TCTTTATGTGAT GTAA ATCACATAAATA CCCCTTTAATGTTAT TERM 2710 1940330 - 1940342 + F 75 -9.1 -3.64488 | opp_overlap 1940330 1940329 1940327 1940317, overlap 1940329 GATGGCAAGAAATAG CGCCT GCC AGGCG TCTTTTCCGGCCATT yecR 1940413 - 1940736 + | hypothetical protein TERM 2711 1940746 - 1940768 + F 76 -10.6 -3.07816 | opp_overlap 1940739 1940738 CTCTAAACGTTTTAA TCAGCGAGGG GGA TCTTCGCTGA TTAAATAAATAGCGG ftn 1940908 - 1941405 + | ferritin iron storage protein (cytoplasmic) TERM 2712 1941413 - 1941435 + T 100 -17 -3.61178 | overlap 1941412 AAAACTAATGCTCTC CGGCGGCAGG TTT TCTGCCGCCG TTTCAAATCAGTGAC yecH 1941682 - 1941443 - | hypothetical protein TERM 2713 1941493 - 1941480 - G 77 -6.7 -4.57569 | opp_overlap 1941470 1941478 TGATCGGTTGAAAAA CCTTC TTCT GAAGG TATAAATTTGCCTTT TERM 2714 1942834 - 1942844 + G 72 -8.2 -3.7229 | overlap 1942832 CAATTACCTTTCTGC CGCC ACT GGCG TTTGCACTGTTTTAT tyrP 1941873 - 1943084 + | tyrosine transporter yecA 1943800 - 1943135 - | conserved hypothetical protein; putative metal-binding protein TERM 2715 1943854 - 1943866 + r 78 -6.3 -4.69027 | CTTACATGCCGGTCC GTATC AGA GATAC TTTTTGAGTGGCTTT TERM 2716 1943949 - 1943936 - R 100 -8.1 -5.64274 | opp_overlap 1943936 GCAGGCACAAAAAAA CCACC CGAA GGTGG TTTCACGACACTGCT TERM 2717 1944037 - 1944057 + r 72 -10.5 -2.89742 | overlap 1944040 GCACAGCGCGAACGC CGAGGGATT TTA AATCCCTTG TGTCTACCGATTCCA TERM 2718 1944040 - 1944054 + r 72 -8.6 -3.5947 | overlap 1944037 CAGCGCGAACGCCGA GGGATT TTA AATCCC TTGTGTCTACCGATT TERM 2719 1944256 - 1944272 + r 74 -10.9 -2.62616 | TCGAACTCGCGACCC CGACCTT GGC AAGGTCG TGCTCTACCAACTGA pgsA 1944998 - 1944450 - | phosphatidylglycerophosphate synthetase uvrC 1946887 - 1945055 - | excinuclease UvrABC, endonuclease subunit uvrY 1947540 - 1946884 - | DNA-binding response regulator in two-component regulatory system with BarA TERM 2720 1947790 - 1947779 - H 73 -4.4 -4.80167 | CAGCAAAAATGAAAA TCAG CCCG CTGA ATATGTAACATTAAT TERM 2721 1948151 - 1948140 - g 81 -5.8 -4.77986 | TTAAAGATGGAAAAA CAGC TTGC GCTG ATCGAAGACGAAACC yecF 1947999 - 1948223 + | hypothetical protein TERM 2722 1948262 - 1948226 - T 86 -12.4 -3.14051 | opp_overlap 1948231, overlap 1948231 CTACCGTCAGTAATA TAAAACCGGCTGAGAG CGTGC CTTTCAGCCGGTTTTT GCATCTGGCACGCAG TERM 2723 1948257 - 1948231 - T 100 -12.3 -4.70583 | opp_overlap 1948231, overlap 1948226 GTCAGTAATATAAAA CCGGCTGAGAG CGTGC CTTTCAGCCGG TTTTTGCATCTGGCA TERM 2724 1948231 - 1948257 + T 100 -14.5 -4.70659 | opp_overlap 1948231 1948226 GTCAGTAATATAAAA CCGGCTGAGAG CGTGC CTTTCAGCCGG TTTTTGCATCTGGCA sdiA 1949013 - 1948291 - | DNA-binding transcriptional activator TERM 2725 1949202 - 1949232 + r 100 -5.3 -5.70522 | gap 1, opp_overlap 1949197 1949196, overlap 1949203 1949205 CGTTTGAAATGGCGT CCCGCCCCGACTGG TGAA TC-GTCGGGGCTGA TTTTTTCTTATTATT TERM 2726 1949203 - 1949231 + r 76 -8.8 -3.98653 | gap 1, opp_overlap 1949197 1949196, overlap 1949202 1949205 GTTTGAAATGGCGTC CCGCCCCGACTGG TGAA TC-GTCGGGGCTG ATTTTTTCTTATTAT TERM 2727 1949205 - 1949229 + r 77 -10 -3.54636 | gap 1, opp_overlap 1949197 1949196, overlap 1949203 1949202 TTGAAATGGCGTCCC GCCCCGACTGG TGAA TC-GTCGGGGC TGATTTTTTCTTATT yecC 1949995 - 1949243 - | putative transporter subunit: ATP-binding component of ABC superfamily transporter TERM 2728 1949379 - 1949353 - G 81 -6.4 -4.82901 | opp_overlap 1949374, overlap 1949355 CCTGGTCCATAAAAA TCGCCCGGTCCG CAA CATCCCGGGCAA AGCTCATTTCGTGCG yecS 1950660 - 1949992 - | putative transporter subunit: permease component of ABC superfamily transporter TERM 2729 1950217 - 1950205 - G 72 -7.7 -3.88291 | TACCAGGCTGATAAA GCTGT TCG ACAGC GGCGGCAACGCCACC TERM 2730 1950509 - 1950494 - G 81 -4.6 -5.08178 | overlap 1950495 ATAGAGATATAAAAA CGCGCC AGCC AGCGCA CGGGCCAGATTGGCG yedO 1951661 - 1950675 - | D-cysteine desulfhydrase, PLP-dependent TERM 2731 1951727 - 1951746 + r 87 -4.9 -5.39755 | opp_overlap 1951728, overlap 1951728 ACGCGTAAATAAAAA AGGCGCT AGTGAA AGCGCCC TTTTTTGTCATTATG TERM 2732 1951745 - 1951728 - R 100 -8.4 -5.63517 | opp_overlap 1951727 1951728 CGCGTAAATAAAAAA GGCGCT AGTGAA AGCGCC CTTTTTTGTCATTAT TERM 2733 1951728 - 1951745 + r 75 -8.4 -3.82226 | opp_overlap 1951728, overlap 1951727 CGCGTAAATAAAAAA GGCGCT AGTGAA AGCGCC CTTTTTTGTCATTAT fliY 1952566 - 1951766 - | cystine transporter subunit ; periplasmic-binding component of ABC superfamily TERM 2734 1951930 - 1951944 + g 84 -7.8 -4.63486 | CTTCACCGGTTACTG CCAGCG TAT CGTTGG TTTTCTTCACCAGAT TERM 2735 1952090 - 1952113 + g 79 -2.3 -5.22039 | CAGCCACTCTTCATA GTTGGTGCC CAGACC GACACCCAC TTTTTTGCCTTTCAG fliZ 1953205 - 1952654 - | putative regulator of FliA activity fliA 1953970 - 1953251 - | RNA polymerase, sigma 28 (sigma F) factor TERM 2736 1953927 - 1953915 - G 71 -9.1 -3.49653 | opp_overlap 1953914 1953913 ACCAGCGGGACATAA CGCTG CCA CAGCG AGTGTTTATCCATTA TERM 2737 1954116 - 1954100 - R 100 -15.1 -5.60993 | GCGGGCAGAAAAAAA CCCCGCC GTT GGCGGGG AAGCACATTGCTGAC FliC 1956047 - 1954290 - | flagellar filament structural protein (flagellin) TERM 2738 1954858 - 1954868 + g 77 -8.2 -4.08485 | GTAATTGAAGATGTC GCGG CAG CCGC TTTGGTTTCGCTCAA fliD 1956313 - 1957719 + | flagellar filament capping protein fliS 1957744 - 1958154 + | flagellar protein potentiates polymerization fliT 1958154 - 1958519 + | putative chaperone for FliD amyA 1958597 - 1960084 + | cytoplasmic alpha-amylase TERM 2739 1960089 - 1960111 + T 72 -10.5 -2.93853 | opp_overlap 1960087 1960086 1960090, overlap 1960088 AGGTGATTTAAATCC ATCCCCGGC GGCAA GCCGGGGAG ATTTCATTACGGCAG TERM 2740 1960110 - 1960090 - T 86 -14 -2.66272 | opp_overlap 1960089 1960088, overlap 1960087 1960086 GGTGATTTAAATCCA TCCCCGGC GGCAA GCCGGGGA GATTTCATTACGGCA TERM 2741 1960129 - 1960144 + T 71 -8.2 -3.85698 | TTCATTACGGCAGTG GCGTCG GTAA CGGCGC TTTATCCAGCGCGGC yedD 1960531 - 1960118 - | hypothetical protein TERM 2742 1961040 - 1961024 - g 79 -10.1 -3.72051 | opp_overlap 1961025 GCCAACAATGTCAAA CTGCGCA TGC CGCGCAG CCGTATCCGCATTAT yedE 1960718 - 1961923 + | conserved hypothetical protein; putative inner membrane protein yedF 1961920 - 1962153 + | hypothetical protein TERM 2743 1962159 - 1962187 + F 79 -11.7 -2.78422 | opp_overlap 1962155 1962154 1962150 1962147, overlap 1962156 1962181 TCAGAAGTAATCCCT CATTCCCGCTGTG GCC CACAGCGGGAACA TCGTTACCTCTCTAT yedK 1962262 - 1962930 + | hypothetical protein nmpC 1963443 - 1964525 + | outer membrane porin; DLP12 prophage TERM 2744 1964575 - 1964540 - T 100 -14.2 -3.68529 | gap 1, overlap 1964542 ATCTGATTACTCAAA GATATGTTGTGGGAGGC TTT GCCTCCC-CAACATATA AGTGGCCCCCTCAAG TERM 2745 1964573 - 1964542 - T 100 -16.8 -3.42395 | gap 1, overlap 1964540 CTGATTACTCAAAGA TATGTTGTGGGAGGC TTT GCCTCCC-CAACATA TAAGTGGCCCCCTCA TERM 2746 1964662 - 1964681 + T 100 -13.6 -4.78107 | TTACCCTTTATTTTC TGGGGCGT TTCA ACGCCCCA TTTTTAATAATACTC ybcM 1965824 - 1965027 - | putative DNA-binding transcriptional regulator; DLP12 prophage ybcL 1966385 - 1965834 - | putative kinase inhibitor; DLP12 prophage emrE 1967066 - 1966554 - | putative multidrug resistance protein; DLP12 prophage fliE 1967545 - 1967231 - | flagellar basal-body component TERM 2747 1967357 - 1967371 + g 93 -8.6 -4.88067 | TAGCGCCACGCCGGG TTCACC GAG GGTGAA TTTTTCTGCCTGCGT TERM 2748 1968777 - 1968761 - g 70 -5.7 -4.38472 | overlap 1968762 GGCAAATCAAAATAA CCGCCAG CAG CAGGCGA GCACCACCAGCAATA fliF 1967760 - 1969418 + | flagellar basal-body MS-ring and collar protein fliG 1969411 - 1970406 + | flagellar motor switching and energizing component fliH 1970399 - 1971085 + | flagellar biosynthesis protein TERM 2749 1971287 - 1971315 + G 77 -6 -4.72986 | opp_overlap 1971289, overlap 1971289 ACGAAGTAGAAAGCG AAGTCGTTGGCT TTAAC GGTCAACGACTG TTTTTAATGCCGCTG TERM 2750 1971289 - 1971313 + G 74 -8.6 -3.98256 | opp_overlap 1971289, overlap 1971287 GAAGTAGAAAGCGAA GTCGTTGGCT TTAAC GGTCAACGAC TGTTTTTAATGCCGC TERM 2751 1971418 - 1971401 - g 82 -11.3 -3.55622 | opp_overlap 1971414 1971416 CTGAAGGGCTGCAAA GCGGCAA GCAG TTGCCGC TCGGTCCGGCGTTAT TERM 2752 1971680 - 1971704 + G 74 -8.5 -3.95584 | TGATGGCCCGTTACA CCCGCGCCGAT GTC ATTGTCGTGGG TTTGATTGGTGAACG fliI 1971085 - 1972458 + | flagellum-specific ATP synthase fliJ 1972477 - 1972920 + | flagellar protein TERM 2753 1973708 - 1973689 - g 76 -7.9 -4.16842 | GCCAGGGGCAACAAA GTGCAGA GTTGCG TCTGCAC CCACAGGATTTAGGT fliK 1972917 - 1974044 + | flagellar hook-length control protein fliL 1974149 - 1974613 + | flagellar biosynthesis protein fliM 1974618 - 1975622 + | flagellar motor switching and energizing component fliN 1975619 - 1976032 + | flagellar motor switching and energizing component TERM 2754 1976225 - 1976204 - g 72 -10.9 -3.08211 | gap 1, opp_overlap 1976177, overlap 1976177 1976176 ACGGTCTGAAAATTA GCGC-CAGTG CTT CACTGGGCGC GCGTGAACGGGTTGT fliO 1976035 - 1976400 + | flagellar biosynthesis protein fliP 1976400 - 1977137 + | flagellar biosynthesis protein fliQ 1977147 - 1977416 + | flagellar biosynthesis protein TERM 2755 1978111 - 1978137 + G 72 -4.4 -4.58685 | overlap 1978113 CGGTATCTCTTTAAT GGCGGCATTAAT GCC GTTAATTGCGCC TTTTTGCGAACATTT fliR 1977425 - 1978210 + | flagellar export pore protein rcsA 1978495 - 1979118 + | DNA-binding transcriptional activator, co-regulator with RcsB TERM 2756 1979114 - 1979161 + T 80 -10.6 -3.36415 | opp_overlap 1979121 1979123, overlap 1979115 TTTTTGTCAACATGC GCTAACACATTCTGACTGGTGG TTTC CCACCAGTCAGGCTGAATTAGA TTACTCTGCTTTCTC TERM 2757 1979115 - 1979160 + T 87 -14.1 -2.61126 | opp_overlap 1979121 1979123, overlap 1979114 TTTTGTCAACATGCG CTAACACATTCTGACTGGTGG TTTC CCACCAGTCAGGCTGAATTAG ATTACTCTGCTTTCT TERM 2758 1979154 - 1979121 - T 87 -13.9 -3.04248 | opp_overlap 1979115 1979114, overlap 1979123 CAACATGCGCTAACA CATTCTGACTGGTGG TTTC CCACCAGTCAGGCTG AATTAGATTACTCTG TERM 2759 1979152 - 1979123 - T 76 -10.7 -3.07522 | opp_overlap 1979115 1979114, overlap 1979121 ACATGCGCTAACACA TTCTGACTGGTGG TTTC CCACCAGTCAGGC TGAATTAGATTACTC dsrB 1979350 - 1979162 - | hypothetical protein yodD 1979513 - 1979740 + | hypothetical protein TERM 2760 1979779 - 1979757 - f 100 -14.9 -5.88565 | opp_overlap 1979752 TGCACAATAAAAAAA TCCCGACCC TGAGG GGGTCGGGA TGAAACTTGCTTAAG TERM 2761 1979989 - 1979977 - f 70 -2.7 -5.00616 | TCGCTCCCGAAAAAA TCATC TTT GATAA TTTGTGCTGTTTTGA yedP 1980038 - 1980853 + | putative mannosyl-3-phosphoglycerate phosphatase (mngB-like) yedQ 1982544 - 1980850 - | putative diguanylate cyclase TERM 2762 1980918 - 1980906 - GT 81 -9.1 -4.0641 | opp_overlap 1980917 GTTTAGCGAGATAAA GCCGA CGG TCGGC CAGTGACTGGAGTTG ECS88_2010 1982653 - 1982465 - | hypothetical protein TERM 2763 1982661 - 1982712 + r 78 -10.2 -3.64049 | gap 1, opp_overlap 1982677, overlap 1982672 ACTATCATTCATTGC AGGCATTG-GGACACCAGGCCGGAT GTG ATCCGGCCTGGTGTTAATGATACCC TTTCAAACTTCTTCC TERM 2764 1982672 - 1982700 + r 100 -23.3 -3.22491 | opp_overlap 1982677, overlap 1982661 TTGCAGGCATTGGGA CACCAGGCCGGAT GTG ATCCGGCCTGGTG TTAATGATACCCTTT TERM 2765 1982695 - 1982677 - R 89 -14.6 -2.62983 | opp_overlap 1982672 1982661 GGCATTGGGACACCA GGCCGGAT GTG ATCCGGCC TGGTGTTAATGATAC yedI 1983893 - 1982976 - | conserved hypothetical protein; putative inner membrane protein yedA 1984066 - 1984986 + | conserved hypothetical protein; putative inner membrane protein vsr 1985445 - 1984975 - | DNA mismatch endonuclease of very short patch repair dcm 1986844 - 1985426 - | DNA cytosine methylase TERM 2766 1986873 - 1986853 - R 91 -13.3 -3.15999 | CCTGCATAGATTTAA CCGGCCATC TGA GATGGCCGA CAGGTTAACATAATT yedJ 1987606 - 1986911 - | putative metal-dependent phosphohydrolase yedR 1988011 - 1987646 - | conserved hypothetical protein; putative inner membrane protein TERM 2767 1987987 - 1988002 + g 77 -6.2 -4.62471 | opp_overlap 1987984 GACTTAGAACCATTA TGTGAT AAAA ATCACA TTTTTCCACATTGGA TERM 2768 1988092 - 1988104 + H 76 -4.1 -5.13648 | overlap 1988087 TGAATACAGGAAAAA TCGTT TTG AGCGA TTTTATTTATCTTTG TERM 2769 1988242 - 1988258 + H 100 -13.7 -5.66684 | GTTTATATTTTTTGG GCCGGCA TGA TGCCGGC TTTTTTTATGCCTTC ECS88_2017 1988547 - 1989692 + | outer membrane protein F precursor (Porin ompF) TERM 2770 1989765 - 1989736 - f 86 -13.7 -2.8032 | opp_overlap 1989736, overlap 1989733 1989731 TAAAACTTAACACTA GCCTGAGTTCG TCCCTCAT CGAACTCAGGC TTTTTTATTGGCATT TERM 2771 1989736 - 1989765 + F 100 -13.7 -5.4756 | opp_overlap 1989733 1989731 1989736 TAAAACTTAACACTA GCCTGAGTTCG TCCCTCAT CGAACTCAGGC TTTTTTATTGGCATT hchA 1990288 - 1991139 + | Hsp31 molecular chaperone TERM 2772 1991175 - 1991207 + T 100 -12.8 -4.62872 | gap 1, opp_overlap 1991175 1991174 AAGCGCATAATCAAT CGCAGCCGCGTTAGT ACTC AC-GACGTGGCTGCG TTTTTCACGGTTAAT yedV 1992604 - 1991246 - | sensory kinase in two-component regulatory system with YedW yedW 1993275 - 1992604 - | DNA-binding response regulator in two-component system with YedV yedX 1993408 - 1993821 + | hypothetical protein yedY 1993930 - 1994934 + | exported heme-molybdoenzyme molybdopterin-containing subunit YedY; TAT export yedZ 1994935 - 1995570 + | heme-molybdoenzyme heme-containing subunit YedZ; cytochrome b subunit yodA 1995827 - 1996477 + | conserved hypothetical protein; putative metal-binding protein TERM 2773 1996455 - 1996477 + F 81 -3.4 -5.44119 | overlap 1996460 GTAGCAAAGAAGTGG TCGAGGAGAT GAT GTCTCATTGA TTTTTTTGCGCTGAC TERM 2774 1996567 - 1996591 + F 100 -9.4 -5.62045 | gap 1, opp_overlap 1996564 1996567 AATAAGACAAACTCA GACACG-CTCA TGCT TGAGACGTGTC TTTTTTATTATGTCT yeeI 1997330 - 1998127 + | hypothetical protein ECS88_2030 1998665 - 1998438 - | hypothetical protein TERM 2775 1998733 - 1998704 - R 80 -10.7 -3.36273 | GGCGCTGAATATCAA CCCGGTACAGCAG CGGG CTGCTGTACGTGG CTCACGAACACCGGA TERM 2776 1999312 - 1999300 - R 72 -5.5 -4.56597 | opp_overlap 1999300, overlap 1999302 GCCGCGGGGCAAAAA TGCGA ATG CCGCA TATCGTCCCCCTCTC TERM 2777 1999786 - 1999758 - R 71 -10.3 -2.72829 | opp_overlap 1999763, overlap 1999757 1999760 CACACTCTGGCAAAT TACCACCACCTCC ACA GGAGGTGGTTCTA TATAGACTTTTATCA TERM 2778 1999781 - 1999760 - R 72 -10.1 -2.90813 | opp_overlap 1999763, overlap 1999758 1999757 CACTCTGGCAAATTA CCACCACCT CCAC AGGAGGTGG TTCTATATAGACTTT TERM 2779 1999763 - 1999781 + r 100 -14.6 -3.60814 | opp_overlap 1999760 1999758 1999757 TCTGGCAAATTACCA CCACCTCC ACA GGAGGTGG TTCTATATAGACTTT irp 2001225 - 1999921 - | Salicylate synthase TERM 2780 2000584 - 2000554 - G 82 -9 -4.21607 | gap 1 CTGACGGAACATAAA CGAGCGCACAGGC GTGTTT GCCTGC-CGCCCG TATAACAGCGTGGCG irp 2002656 - 2001253 - | putative permease of yersiniabactin-iron transporter YbtX irp 2004355 - 2002526 - | permease and ATP-binding protein of yersiniabactin-iron ABC transporter YbtQ TERM 2781 2003710 - 2003742 + gr 76 -8.5 -3.86346 | gap 1, overlap 2003710 2003713 CAACGATATCGCCGC T-CAGACGCTGGTG CGCTTC CCCCAGCGTCTGCA TTTGTCGCCGCATCG TERM 2782 2003710 - 2003741 + gr 72 -10.1 -2.91593 | overlap 2003710 2003713 CAACGATATCGCCGC TCAGACGCTGGTG CGCTTC CCCCAGCGTCTGC ATTTGTCGCCGCATC TERM 2783 2003713 - 2003738 + gr 71 -10.4 -2.70354 | overlap 2003710 2003710 CGATATCGCCGCTCA GACGCTGGTG CGCTTC CCCCAGCGTC TGCATTTGTCGCCGC TERM 2784 2004253 - 2004218 - GR 91 -13.4 -3.14881 | gap 1 GAATGCCGCCAGCAA CAGCGCCAGCATACTGC GTC GCAGCATCCTGGC-CTG ACTGCCAACGCTGGA irp 2006117 - 2004315 - | permease and ATP-binding protein of yersiniabactin-iron ABC transporter YbtP TERM 2785 2005992 - 2005982 - GH 75 -4.6 -4.85599 | TCCACGCCAGAAAAA GGAG CGC CCCC AGGCTGGTTAATGCC ybtA 2006284 - 2007243 + | AraC type regulator of yersiniabactin gene cluster (HPI) TERM 2786 2007276 - 2007306 + F 100 -21.3 -3.93658 | opp_overlap 2007280 TAAACTCCTCCCTGA CAGAGGCCCGGAT ACCTC ATCCGGGCCTCTG TTCTTTCCGCCTGTT TERM 2787 2007302 - 2007280 - f 93 -15.6 -2.87132 | opp_overlap 2007276 CTCCTCCCTGACAGA GGCCCGGATA CCT CATCCGGGCC TCTGTTCTTTCCGCC TERM 2788 2007358 - 2007327 - f 100 -15.2 -3.14132 | opp_overlap 2007322, overlap 2007334 2007348 TCCGCCTGTTACCAA CCCGAAACGGGCAT AAAT AAACCCGTTTCGGG TAGCATTCAATTGTT TERM 2789 2007358 - 2007348 - f 82 -8.2 -4.55697 | opp_overlap 2007322, overlap 2007334 2007327 ACGGGCATAAATAAA CCCG TTT CGGG TAGCATTCAATTGTT TERM 2790 2008581 - 2008616 + G 70 -10.5 -2.72379 | gap 2 TTAACATCACCTTAT TCGACCGCCAGCCGCTG CACC CGGCGGTTGGCG--CGA TGCTTGCCGACTTCA TERM 2791 2009252 - 2009233 - g 70 -10.7 -2.69799 | opp_overlap 2009231, overlap 2009230 TGAGCTGACAGACTA TGCCCGC CGTTGC GCGGGCA GGTTAATCGAGTGCG TERM 2792 2009337 - 2009357 + G 72 -8.2 -3.77241 | overlap 2009349 TTGTTGCGGTTCTGG CCGTCCTG CTGGC CGGGGCGG TTTACGTTCCGGTTT TERM 2793 2010137 - 2010119 - g 70 -10.2 -3.14132 | CGGGTGGTGGATGAA CAGGGCCG GGA CTGCCCTG ACTGGGTGCCGGGTG TERM 2794 2011695 - 2011667 - g 77 -6 -4.70659 | gap 1, opp_overlap 2011669 2011670, overlap 2011669 2011670 GGCGACATTGAAAAA CAG-GTTGCCGCC CTCT GGCAGCAACTCTT ATCAACTGGCAATGT TERM 2795 2011692 - 2011669 - g 74 -8.8 -3.96999 | opp_overlap 2011669 2011670, overlap 2011667 2011670 CGACATTGAAAAACA GGTTGCCGCC CTCT GGCAGCAACT CTTATCAACTGGCAA TERM 2796 2011691 - 2011670 - g 78 -12.3 -2.97476 | opp_overlap 2011669 2011670, overlap 2011669 2011667 GACATTGAAAAACAG GTTGCCGCC CTCT GGCAGCAAC TCTTATCAACTGGCA TERM 2797 2011670 - 2011691 + G 70 -10.1 -3.23393 | opp_overlap 2011670 2011669 2011667, overlap 2011669 GACATTGAAAAACAG GTTGCCGCC CTCT GGCAGCAAC TCTTATCAACTGGCA TERM 2798 2012604 - 2012588 - g 86 -7.2 -5.0133 | opp_overlap 2012589 2012592, overlap 2012589 CATCGGCTGAAAAAA CGGGCG GCTGA CGCCCA TCTCACCCCGTCGGC TERM 2799 2012612 - 2012645 + G 73 -9.5 -3.60525 | overlap 2012592 2012589 GACGCCCATCTCACC CCGTCGGCCGTACTG TTGT CGGTGTGGTCAACGG TTCTCTCTGCATGGA TERM 2800 2013170 - 2013153 - g 72 -8.3 -3.78775 | TGGCCGAGGATGAAA GCGGCTG GCAA CTGCCGC TCGCCGCGCTGGTGC TERM 2801 2013241 - 2013199 - g 76 -10.5 -3.34398 | gap 1, overlap 2013197 GCCTCCCGTTAAACA CGCAGGGCA-ATGCGCAGAG CGCT CACCGCGCGTATGCCCTGAG CACTCTCAGCCACAC irp 2007416 - 2013541 + | High-molecular-weight nonribosomal peptide/polyketide synthetase 2 (HMWP2) TERM 2802 2013564 - 2013594 + F 76 -10.5 -3.33711 | gap 1, overlap 2013559 CAAACTGATTTTCCC CGGAACGCCATCGC GAAC GC-ATGGCGTTCCA TTGACTTTGTGAATC TERM 2803 2014555 - 2014510 - gf 83 -11.1 -3.61715 | gap 1, opp_overlap 2014537, overlap 2014513 2014525 CAGCGCGGTCAATAA CGACGGCAACAGAAAGGTCGGC TAT ACCGCCCCTTCCGTCGCCGG-G CAGCAGGCGGTCATC TERM 2804 2014553 - 2014513 - gf 100 -18.3 -2.93073 | opp_overlap 2014537, overlap 2014510 2014525 CGCGGTCAATAACGA CGGCAACAGAAAGGTCGGC TAT ACCGCCCCTTCCGTCGCCG GGCAGCAGGCGGTCA TERM 2805 2015053 - 2015028 - gf 71 -3.2 -4.83169 | gap 1, opp_overlap 2015035 2015036, overlap 2015029 2015031 2015032 ATGGCGGCAGAAAAA GTACTGCGCTG CTGCT CAGCGCCGC-C AGCGACAGCGCGTTG TERM 2806 2016050 - 2016062 + GF 75 -4.7 -4.84359 | CAGGTGGCGCATCAG CTCGG CGC CCGCG TTTTTCTGGAGATGG TERM 2807 2018399 - 2018369 - gf 74 -3.2 -4.96848 | gap 1, overlap 2018370 2018371 TGGCTCAGAGAAAAA GGGGCGCGACGCA TCGCCC TGC-TGGCGCCGC GCGTGGATGAGTCAT TERM 2808 2018436 - 2018453 + GF 77 -11.3 -2.67747 | overlap 2018435 GCGACGTGGAGGGCG GGCAGAC GCGC GTCTGCC GTTGTGATGTGGGCG TERM 2809 2018587 - 2018630 + GF 86 -13.2 -3.02144 | gap 1 GCTTGATGACCACCA GCTGGC-TGCCGTTTTCGC GGTAAAA GCGCAGGCGGCAAGCCAGC TGTTGCAAACCCTGC TERM 2810 2018864 - 2018844 - gf 81 -11.1 -3.55444 | overlap 2018845 CGGCCACGCCGGAAA TGCTGGCGA CGC TCGCCAGCC GAGGTATGGGCGCGT TERM 2811 2018863 - 2018845 - gf 90 -14.6 -2.73124 | overlap 2018844 GGCCACGCCGGAAAT GCTGGCGA CGC TCGCCAGC CGAGGTATGGGCGCG TERM 2812 2019027 - 2019017 - gf 71 -2.4 -4.9725 | overlap 2019003 AGCGCCACAGAAAAA GCCG CAA CGCC GGTCATTCCTCCTGC TERM 2813 2019658 - 2019644 - gf 87 -11.4 -3.61398 | CTTTCCCCGGAAGAA CAGCGC ATC GCGCTG GAAAAACGGCGGCAT TERM 2814 2022837 - 2022817 - gf 74 -7.5 -4.07885 | overlap 2022818 TATGGTGTCGCAAAA CCTGACGCT GCA AGCGGCAGA AACGTGGCTCGACAA irp 2013629 - 2023120 + | High-molecular-weight nonribosomal peptide/polyketide synthetase 1 (HMWP1) TERM 2815 2023615 - 2023625 + GF 72 -5.4 -4.48713 | CGACAGTTGCTCTAC TCCA CTC TGGA TTTGTTGTTGCTGGC TERM 2816 2024172 - 2024183 + GF 70 -7.2 -3.86346 | GCCGCCGCACCACGA CCGG TTAG CCGG TTTCTACAACGATGA irp 2023057 - 2024217 + | Thiazolinyl-S-HMWP1 reductase YbtU irp 2024214 - 2025017 + | putative thioesterase YbtT TERM 2817 2025956 - 2025966 + G 72 -6.8 -4.2349 | overlap 2025963 CACCTTTGACTGTAC CCTG CAA CAGG TTTTCGGTATGGCGG TERM 2818 2026576 - 2026551 - g 100 -6.7 -5.46276 | opp_overlap 2026551, overlap 2026552 AAGATAGACAAAAAA CGCCTGACGGC TCTC GCCGTCGACCG TTATCGCCATTCTGC irp 2025021 - 2026598 + | salicyl-AMP ligase YbtE TERM 2819 2026645 - 2026606 - f 91 -11.5 -3.72051 | overlap 2026607 2026610 2026631 CCCAATAAGCGCAAA CCGACCCGAAACAGGTT GAAATA AACCCGTTTCGGGTAGC ACCACTATTAGAAAT TERM 2820 2026644 - 2026607 - f 89 -15 -2.82749 | overlap 2026606 2026610 2026631 CCAATAAGCGCAAAC CGACCCGAAACAGGTT GAAATA AACCCGTTTCGGGTAG CACCACTATTAGAAA TERM 2821 2026641 - 2026610 - f 93 -15.3 -2.66593 | overlap 2026607 2026606 2026631 ATAAGCGCAAACCGA CCCGAAACAGGTT GAAATA AACCCGTTTCGGG TAGCACCACTATTAG TERM 2822 2026641 - 2026631 - f 79 -8.2 -4.43208 | overlap 2026610 2026607 2026606 ACAGGTTGAAATAAA CCCG TTT CGGG TAGCACCACTATTAG TERM 2823 2026930 - 2026911 - g 76 -12.8 -2.60244 | overlap 2026907 GCCGGAATTAAGCGA CGCCGGCG TCAC CGCCAGCG ACAAACTCCCCAGAG TERM 2824 2028201 - 2028222 + G 70 -5.1 -4.36914 | gap 1 CTACGAAACCGCTGA CGTCAC-GCT GCA AGCCGCGACG TTTTATACCCACACC fyuA 2026729 - 2028750 + | Yersiniabactin/pesticin outer membrane receptor (IRPC) TERM 2825 2028762 - 2028782 + T 91 -11.2 -4.08945 | opp_overlap 2028762 CTGATTATTGTAAAA GGGATACC GAAAA GGTATCCC TTTTACACCACTAGT TERM 2826 2028782 - 2028762 - T 93 -11.2 -4.15565 | opp_overlap 2028762 CTGATTATTGTAAAA GGGATACC GAAAA GGTATCCC TTTTACACCACTAGT TERM 2827 2029430 - 2029413 - T 79 -2.7 -5.44721 | ATTATGTCAAAAAAA TATCAGC CATT GCTTATA ACTCATTATATGTCA ECS88_2047 2033484 - 2032369 - | hypothetical protein TERM 2828 2032711 - 2032721 + g 76 -4 -4.88228 | TATTGGCATATCTGT TTCA CTT TGAA TTTTTGCTATTAGAT TERM 2829 2034912 - 2034925 + G 70 -3.8 -4.64676 | GCCAGTGTGGTTGGC GGTG GATTTA CACC TTTTATTGCCGCTGC shiA 2033736 - 2035052 + | shikimate transporter TERM 2830 2035059 - 2035082 + F 79 -9.6 -3.78096 | opp_overlap 2035065, overlap 2035060 CGCTCGTGATAGCCT AGCGAAGATC ATCC GATCTTCGCC TTATACTTTTGTTTC TERM 2831 2035060 - 2035081 + F 86 -13.1 -2.85231 | opp_overlap 2035065, overlap 2035059 GCTCGTGATAGCCTA GCGAAGATC ATCC GATCTTCGC CTTATACTTTTGTTT TERM 2832 2035932 - 2035944 + G 72 -7.7 -3.91084 | opp_overlap 2035932 2035930 2035928 2035927 GGAAAAAATACCAGA TGCCA GCA TGGCA TTTAATTACCGCTGA amn 2035154 - 2036608 + | AMP nucleosidase TERM 2833 2036664 - 2036696 + F 85 -12.1 -3.34013 | opp_overlap 2036661 2036671, overlap 2036669 2036671 TAAGTAAGACATCTG GCAAATAGCCTGC AATAAAC GCGGGCTGTTTGC TTCCTTGGGCAGATG yeeN 2036951 - 2037667 + | hypothetical protein TERM 2834 2037675 - 2037709 + T 87 -13.9 -2.88212 | opp_overlap 2037680 2037684, overlap 2037680 2037684 ATCTCTAATTATATG TTAAAGAAATCTGTC TTTAT GGCAGATTTCTTTAA TCTCATATAATCCTT TERM 2835 2037680 - 2037704 + T 81 -9.4 -3.8766 | opp_overlap 2037680 2037684, overlap 2037675 2037684 TAATTATATGTTAAA GAAATCTGTC TTTAT GGCAGATTTC TTTAATCTCATATAA TERM 2836 2037782 - 2037767 - T 77 -3.2 -5.24531 | ATTGCTTATAAAAAA TCCCCG TTCC CAGAGA AATAATATTTATTAA TERM 2837 2038058 - 2038030 - T 100 -15.4 -5.07011 | CACAGAAATCAAAAA CCCGGCCACTTT TTTAC AAAGTGACCGGG TAAAAATAATTTTTA TERM 2838 2038059 - 2038073 + T 77 -4.4 -5.13473 | TACAAAGTGACCGGG TAAAAA TAA TTTTTA TTTTTTAACTGTCCT yeeO 2039937 - 2038297 - | putative Na+-driven multidrug efflux system TERM 2839 2039190 - 2039210 + g 72 -6.2 -4.43681 | TAAGAATATTCAGGC TACCGTTA ATCAG TAGCGGTA TTTTCGTATTCCCTG TERM 2840 2039526 - 2039516 - G 85 -3.2 -5.42862 | ATAGCTGCAAAAAAA GCCA TAA TGAC CATATTGAAGCTGTC TERM 2841 2040051 - 2040033 - R 93 -11.7 -4.12942 | opp_overlap 2040033 2040042 CCAAATTTCTGAAAA GCCCGCT TTTAT AGCGGGC TTTTTGCTATATCTG TERM 2842 2040033 - 2040051 + r 100 -11.7 -4.86133 | opp_overlap 2040033, overlap 2040042 CCAAATTTCTGAAAA GCCCGCT TTTAT AGCGGGC TTTTTGCTATATCTG cbl 2041008 - 2040058 - | DNA-binding transcriptional activator of cysteine biosynthesis nac 2042027 - 2041110 - | DNA-binding transcriptional dual regulator of nitrogen assimilation TERM 2843 2042082 - 2042099 + r 79 -4.9 -5.10163 | gap 1, opp_overlap 2042082 TTACTTACAACCAGA CT-GCAAG ATG CTTGCCAG TTTTATTTTGGCGTT TERM 2844 2042434 - 2042463 + r 83 -12.3 -3.02946 | opp_overlap 2042440, overlap 2042440 AGAGGAGCCAAATTC AAAAAAGCCTGCT TTCT AGCAGGCTTTTTG CTTTCTAATTACCAA TERM 2845 2042440 - 2042457 + r 100 -11.3 -5.05505 | opp_overlap 2042440, overlap 2042434 GCCAAATTCAAAAAA GCCTGCT TTCT AGCAGGC TTTTTGCTTTCTAAT TERM 2846 2042457 - 2042440 - R 100 -11.3 -5.22039 | opp_overlap 2042440 2042434 GCCAAATTCAAAAAA GCCTGCT TTCT AGCAGGC TTTTTGCTTTCTAAT erfK 2043416 - 2042484 - | conserved hypothetical protein; putative NAD(P)-binding Rossmann-fold domain cobT 2044560 - 2043481 - | nicotinate-nucleotide dimethylbenzimidazole-P phophoribosyl transferase cobS 2045315 - 2044572 - | cobalamin 5'-phosphate synthase cobU 2045857 - 2045312 - | bifunctional cobinamide kinase and cobinamide phosphate guanylyltransferase ECS88_2061 2046486 - 2046322 - | hypothetical protein TERM 2847 2047052 - 2047040 - R 82 -7.7 -4.48333 | ATAGACCAATTAAAA TGCAG TTT CTGCA GGTCAACGTCTGACC TERM 2848 2047588 - 2047605 + r 72 -5.5 -4.52857 | opp_overlap 2047587 2047588, overlap 2047577 2047590 CCACGCTGGGAAAAT CGCTGCT ATTC AGCAGAG TTTTGTATCGAGAAT ECS88_2063 2047848 - 2047732 - | transposase, IS3 family TERM 2849 2047937 - 2047956 + r 74 -5.7 -4.65838 | AATACAGCCCGTCTA CCGTCTT TTTTTC AGGACGG TTTTTCCAATCTCTG ECS88_2064 2048345 - 2048202 - | hypothetical protein ECS88_2065 2048392 - 2048544 + | hypothetical protein ECS88_2066 2048651 - 2048767 + | hypothetical protein ECS88_2067 2048963 - 2050177 + | putative carbohydrate kinase ECS88_2068 2050191 - 2050949 + | hypothetical protein TERM 2850 2050980 - 2050959 - f 72 -7.3 -4.14147 | opp_overlap 2050959 AGATAATAATAATAA TGGGGTAAC ACCA GTTACTCCA TTTACTATAATAGAA TERM 2851 2050959 - 2050980 + F 81 -9.5 -3.86202 | opp_overlap 2050959 AGATAATAATAATAA TGGGGTAAC ACCA GTTACTCCA TTTACTATAATAGAA TERM 2852 2051257 - 2051243 - g 72 -5.7 -4.49644 | opp_overlap 2051243 ATTAAAAACCGAAAA GTTCC TCTCT GGAAC TGGTTTGCCGGTCTC TERM 2853 2051586 - 2051573 - g 75 -6.7 -4.35524 | GCTGGAAATGCAAAA GTAGC TGAA GCTAC GGGATCCATGCTGGT ECS88_2069 2051006 - 2051971 + | hypothetical protein ECS88_2070 2051974 - 2053008 + | putative phosphotriesterase-related protein TERM 2854 2053047 - 2053011 - T 85 -9.3 -4.40358 | opp_overlap 2053011 2053015 2053032, overlap 2053012 2053014 2053015 ATTGACCGCATAAAA CCATTATCCCCCGGCAC ATT GCGCCGGGGGATGTCAA TTAATACCCCGCCGT TERM 2855 2053046 - 2053012 - T 78 -10.6 -3.23733 | opp_overlap 2053011 2053015 2053032, overlap 2053011 2053014 2053015 TTGACCGCATAAAAC CATTATCCCCCGGCAC ATT GCGCCGGGGGATGTCA ATTAATACCCCGCCG TERM 2856 2053044 - 2053014 - T 91 -13.2 -3.18044 | opp_overlap 2053011 2053015 2053032, overlap 2053012 2053011 2053015 GACCGCATAAAACCA TTATCCCCCGGCAC ATT GCGCCGGGGGATGT CAATTAATACCCCGC TERM 2857 2053043 - 2053015 - T 100 -16.7 -2.50345 | opp_overlap 2053011 2053015 2053032, overlap 2053014 2053012 2053011 ACCGCATAAAACCAT TATCCCCCGGCAC ATT GCGCCGGGGGATG TCAATTAATACCCCG TERM 2858 2053015 - 2053043 + T 100 -16.7 -2.56596 | opp_overlap 2053015 2053014 2053012 2053011, overlap 2053011 2053032 ACCGCATAAAACCAT TATCCCCCGGCAC ATT GCGCCGGGGGATG TCAATTAATACCCCG TERM 2859 2054829 - 2054854 + T 80 -11.9 -2.87132 | opp_overlap 2054827 2054823 AAAATACAAGCCATA GCGTCTGCCCT GAGC AGGGTAGATGC TGTATCCGGCGCCGA ECS88_2074 2055820 - 2055323 - | hypothetical protein ECS88_2075 2056128 - 2055721 - | hypothetical protein ECS88_2076 2056987 - 2056382 - | hypothetical protein TERM 2860 2056408 - 2056426 + g 74 -8.8 -3.94936 | TACAGCCAAAATTGC GCTCACCG GTG CAGTGAGC TTTGGTATGTTCCTT TERM 2861 2056980 - 2056960 - G 70 -10.5 -2.74263 | overlap 2056959 AGGTCATGGTTAAAT CTCCGTATG GTT CATACGGAA TAGCCACGTCGTAAA TERM 2862 2057129 - 2057119 - R 71 -2.4 -5.15969 | TTTTAATGTAAAAAA CCGG TTA CGGG TAAGGCTGTGAGGAG TERM 2863 2057713 - 2057752 + r 70 -8.9 -3.19463 | gap 2, opp_overlap 2057717 2057720, overlap 2057717 ACAGGAGTGAGTCTA TAAGTAAGCGTC-A-ACGG AGCA CCGTATTGACGCTTATTTA TTGGTGAGTACTACG TERM 2864 2057717 - 2057748 + r 74 -7.5 -4.258 | gap 2, opp_overlap 2057717 2057720, overlap 2057713 GAGTGAGTCTATAAG TAAGCGTC-A-ACGG AGCA CCGTATTGACGCTTA TTTATTGGTGAGTAC ECS88_2079 2059359 - 2057746 - | conserved hypothetical protein, putative transposase ORF1, IS66 family TERM 2865 2059355 - 2059385 + g 95 -9 -5.03145 | ATGAGGTATTTCTGA CTCATGACCGTTTT TAT AATGCGGTCAGGAG TTTTTTACAACATTG ECS88_2080 2059740 - 2059390 - | conserved hypothetical protein, putative transposase ORF2, IS66 family ECS88_2081 2060162 - 2059737 - | putative transposase OrfA from plasmid origin ECS88_2082 2060817 - 2061224 + | conserved hypothetical protein; putative InterPro motifs Prophage CP4-57 regulatory protein (AlpA) ECS88_2083 2061303 - 2061920 + | hypothetical protein TERM 2866 2061964 - 2061931 - f 100 -16.1 -3.30124 | opp_overlap 2061936 GTTGATGTCTGAGAA CCACAGGGCTGGC AGCAGAAA ACCAGCCCTGTGG TAAAATACAGTAATA TERM 2867 2062004 - 2061978 - f 77 -10.1 -3.46304 | overlap 2061980 GGTAAAATACAGTAA TAGCGGCGTAC ATCAG GCACGCCGCTC ACTCGTCCACAGATC TERM 2868 2062002 - 2061980 - f 90 -12.7 -3.29269 | overlap 2061978 TAAAATACAGTAATA GCGGCGTAC ATCAG GCACGCCGC TCACTCGTCCACAGA TERM 2869 2062265 - 2062244 - f 72 -10.1 -2.92371 | ACGCACTGAATCATA GCCTCCCAC CTCA GCAGGAGGC AGTCAGCTTTCAGGC ECS88_2085 2062348 - 2062608 + | hypothetical protein ECS88_2086 2062747 - 2062658 - | hypothetical protein ECS88_2087 2064447 - 2062879 - | putative transposase ORF 1, IS66 family TERM 2870 2063206 - 2063216 + g 71 -3.2 -4.84918 | CGCCAGTTCTGAGTG CCTT GAG AGGG TTTTCTGTTTCTCCC TERM 2871 2064138 - 2064185 + g 88 -11.9 -3.78775 | gap 1 TGCGGGTCTGACGCA GCGG-GCGCTGCACTGCCGGGT CATCC ACCCGGCCGGTCAGCGTATCGC TTTCCTGCTGCAGCA ECS88_2088 2064810 - 2064463 - | putative transposase ORF 2, IS66 family ECS88_2089 2065559 - 2065627 + | Insertion sequence IS21 putative ATP-binding protein TERM 2872 2066680 - 2066702 + F 81 -3.4 -5.43974 | overlap 2066681 2066682 ACTACCTGGTAGATT GTTCTGTACA TCA TGTACGGAGG TTTTTGTTTGCTTTT TERM 2873 2067855 - 2067832 - g 86 -3.9 -5.40072 | GTCCTCCCAAAAAAA CTGCTGAAT GAAATG ATTGAGCAG GCGTACCATGATTTG ECS88_2090 2066746 - 2067909 + | hypothetical protein TERM 2874 2067938 - 2067963 + F 100 -12.6 -5.06052 | gap 1 TTATTTCCGTGAATC CCCCGC-CACC TTTCC GGTGCGCGGGG TTTTGTCTTTTTTCA ECS88_2091 2067954 - 2068865 + | conserved hypothetical protein; putative GTP-binding domain TERM 2875 2069005 - 2069021 + F 70 -9.5 -2.98447 | opp_overlap 2068986 2068981 2069003 2069018 2069020, overlap 2068986 2069004 2069007 CGTTACTATCATATC GATCGTT ATA AACGATC ATTTGTAGTAAATGA TERM 2876 2069518 - 2069494 - g 75 -4.9 -4.74132 | ACACTGCAGGAAAAA CTCGCCACCCC GGC AGGACAGCAAG TCGCACAGACCCTGC TERM 2877 2071079 - 2071058 - g 74 -7.9 -4.015 | TTATGGAGGAAAGAA CGGAGACAG TCAC CCGTCGCCG TCGGAAGGATAGCTT ECS88_2092 2069083 - 2071479 + | hypothetical protein ECS88_2093 2071476 - 2072381 + | hypothetical protein TERM 2878 2072612 - 2072629 + G 85 -8.5 -4.45544 | overlap 2072609 2072606 2072606 AATCAGGTTCTGTCG GTAAACC GATC GGTTTAC TTTTCATTGCTGAAA ECS88_2094 2072378 - 2073448 + | hypothetical protein TERM 2879 2073468 - 2073484 + F 91 -10.1 -4.85129 | opp_overlap 2073467 2073465, overlap 2073467 2073465 GCCCCAAAGAAACGC CACCGCC TGT GGTGGTG TTTTTCCTGTCTGGT ECS88_2095 2073476 - 2074267 + | conserved hypothetical protein; putative exported protein ECS88_2096 2074283 - 2074693 + | hypothetical protein TERM 2880 2074837 - 2074862 + F 100 -16.9 -5.46129 | CATTTCACCCGTCAG GCCGCGTCTTC TCCG GGAGACGCGGC TTTTTTCATTTATTG ECS88_2097 2074914 - 2075735 + | hypothetical protein ECS88_2098 2075817 - 2076296 + | putative antirestriction protein of plasmid origin yeeS 2076342 - 2076788 + | putative DNA repair protein; CP4-44 prophage yeeT 2076851 - 2077072 + | conserved hypothetical protein; CP4-44 prophage TERM 2881 2077399 - 2077362 - g 74 -8.5 -4.00042 | gap 1 CTGCTGATGAAACAA CTGGAACTCATGCTCACC AGC GGTGAAC-TGAATCCCCG CCATCAGCATACCGT yeeU 2077146 - 2077514 + | antitoxin of the YeeV-YeeU toxin-antitoxin system; CP4-44 prophage TERM 2882 2077539 - 2077560 + F 70 -10.1 -2.55811 | overlap 2077538 2077537 ATAGCCTTCTGCTAC GGCCTGGTG TTTT CACCACGCC ACTTTTCCATTTTTA yeeW 2077973 - 2078167 + | conserved hypothetical protein; CP4-44 prophage TERM 2883 2078324 - 2078346 + F 91 -9.9 -4.61873 | gap 1, opp_overlap 2078307 CTTCATTTCCCCTGA CGCCAGCCTG AATA CAG-CTGGCG TTTTCATTTATAAAC TERM 2884 2078504 - 2078490 - f 77 -3.6 -5.26316 | TGACCTGACAAAAAA TGAATT CCA AATCCA CGGTCTGGGTAGGAA TERM 2885 2078553 - 2078584 + F 74 -7.5 -4.24342 | gap 2, opp_overlap 2078553 2078552 2078556, overlap 2078556 GAAAACGGATTAAAG TAAGCGTC-A-ACGG AGCA CCGTATTGACGCTTA TTTATTGGTGAGAAC TERM 2886 2078781 - 2078768 - g 70 -3.7 -4.72333 | opp_overlap 2078775, overlap 2078769 AATTAGAGGTAAAAA CGCCC TACC GGGCC ATGAATCACCCGGTC yoeF 2078608 - 2078964 + | hypothetical protein TERM 2887 2079055 - 2079019 - T 83 -10.9 -3.60998 | opp_overlap 2079026, overlap 2079015 2079022 2079026 ACAGATAAGAATCAA TGAGCAATGAGGGTTGC CGG GCAACCCTCATTGAATA AAACGGGAATTACTT TERM 2888 2079052 - 2079022 - T 100 -17 -2.91042 | opp_overlap 2079026, overlap 2079019 2079015 2079026 GATAAGAATCAATGA GCAATGAGGGTTGC CGG GCAACCCTCATTGA ATAAAACGGGAATTA TERM 2889 2079026 - 2079048 + T 100 -16.4 -3.05384 | opp_overlap 2079022 2079019 2079015 2079026 AGAATCAATGAGCAA TGAGGGTTGC CGG GCAACCCTCA TTGAATAAAACGGGA TERM 2890 2079048 - 2079026 - T 100 -16.4 -3.30956 | opp_overlap 2079026, overlap 2079022 2079019 2079015 AGAATCAATGAGCAA TGAGGGTTGC CGG GCAACCCTCA TTGAATAAAACGGGA yeeX 2079460 - 2079065 - | hypothetical protein TERM 2891 2079373 - 2079356 - G 70 -5.6 -4.329 | GAACAGACGAACAAA TTCCAG TACGTC CTGGAA TGAAGGCTTGGTAGT yeeA 2080624 - 2079566 - | conserved hypothetical protein; putative inner membrane protein sbmC 2081296 - 2080823 - | DNA gyrase inhibitor dacD 2082581 - 2081415 - | D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 6b) TERM 2892 2081705 - 2081739 + g 100 -10.8 -4.63218 | overlap 2081706 GTTCCGTACCGACCT TTTTCCCACGGTGCAA AAT TTGCACCGTAGTAAAG TTTTGTTGCCCCCAA TERM 2893 2081706 - 2081738 + g 83 -12.1 -3.3761 | overlap 2081705 TTCCGTACCGACCTT TTTCCCACGGTGCAA AAT TTGCACCGTAGTAAA GTTTTGTTGCCCCCA TERM 2894 2082516 - 2082505 - G 72 -4.4 -4.62069 | overlap 2082510 GGCTGAGGTGAAAAA GGAA TGTT TTCC GCCGCAAAACCAGAC sbcB 2082790 - 2084217 + | exonuclease I yeeD 2084487 - 2084260 - | hypothetical protein yeeE 2085559 - 2084501 - | conserved hypothetical protein; putative inner membrane protein TERM 2895 2085717 - 2085690 - R 100 -12.8 -6.04419 | opp_overlap 2085690 AAAAGAATAAAAAAA CCGGAGCCAAAT GTTC ATTCGACTCCGG TTTATTATTAGAAAA TERM 2896 2085690 - 2085717 + r 87 -8.4 -4.44667 | opp_overlap 2085690 AAAAGAATAAAAAAA CCGGAGCCAAAT GTTC ATTCGACTCCGG TTTATTATTAGAAAA yeeF 2087096 - 2085738 - | putative amino-acid/amine transporter TERM 2897 2087277 - 2087251 - R 91 -7.3 -5.26875 | opp_overlap 2087254, overlap 2087254 GTTTGAAGCAAAAAA TAACCGACGCT GATGA AACGTCGGTTT TTAGTCATTTTTTGA TERM 2898 2087254 - 2087274 + r 80 -6.8 -4.88129 | opp_overlap 2087251 2087254 TGAAGCAAAAAATAA CCGACGCT GATGA AACGTCGG TTTTTAGTCATTTTT TERM 2899 2087274 - 2087254 - R 90 -9 -4.72473 | opp_overlap 2087254, overlap 2087251 TGAAGCAAAAAATAA CCGACGCT GATGA AACGTCGG TTTTTAGTCATTTTT yeeY 2088292 - 2087363 - | putative DNA-binding transcriptional regulator yeeZ 2089162 - 2088338 - | putative epimerase, with NAD(P)-binding Rossmann-fold domain yoeB 2089499 - 2089245 - | toxin of the YoeB-YefM toxin-antitoxin system yefM 2089747 - 2089496 - | antitoxin of the YoeB-YefM toxin-antitoxin system hisL 2090031 - 2090081 + | his operon leader peptide TERM 2900 2090184 - 2090135 - f 95 -15.1 -3.14564 | gap 1, opp_overlap 2090146, overlap 2090146 CCAGTGGTGCATGAA CGC-ATGAGAGAGCCCCCGGAAGA TCA CCTTCCGGGGGCTTTTTTATTGCG CGGTTGATAACGGTT TERM 2901 2090172 - 2090146 - f 100 -20.2 -2.9627 | opp_overlap 2090146, overlap 2090135 TGAACGCATGAGAGA GCCCCCGGAAGA TCA CCTTCCGGGGGC TTTTTTATTGCGCGG TERM 2902 2090146 - 2090172 + F 100 -19.5 -5.4505 | opp_overlap 2090135 2090146 TGAACGCATGAGAGA GCCCCCGGAAG ATCAC CTTCCGGGGGC TTTTTTATTGCGCGG TERM 2903 2090530 - 2090542 + G 81 -10.5 -3.64703 | CGTCGACTGGATTTC GGCGG CTG CCGCC TTTCGCTGGCAACGC hisG 2090227 - 2091126 + | ATP phosphoribosyltransferase TERM 2904 2091618 - 2091600 - g 83 -6 -5.00616 | overlap 2091602 GCGGGCTGTAAAAAA GTGGTG CTGTGCT CACCAC CGCCGATTGCCGATG hisD 2091132 - 2092436 + | bifunctional histidinal dehydrogenase and histidinol dehydrogenase TERM 2905 2093292 - 2093306 + G 72 -7.1 -4.16943 | opp_overlap 2093289 2093290 2093287 CCCTGAAAGAGATCC CCTGC GTGGA GCAGG TTTTCGACTCTGAAA hisC 2092433 - 2093503 + | histidinol-phosphate aminotransferase TERM 2906 2094254 - 2094267 + G 70 -5.9 -4.28487 | opp_overlap 2094254, overlap 2094243 CCCTCGGCGATAAAC GCGGT ATTT GCCGC TTTGGTTTTGTGCTG hisB 2093503 - 2094570 + | fused histidinol-phosphatase ; imidazoleglycerol-phosphate dehydratase hisH 2094570 - 2095160 + | imidazole glycerol phosphate synthase, glutamine amidotransferase subunit with HisF hisA 2095160 - 2095897 + | N-(5'-phospho-L-ribosyl-formimino)-5-amino-1-(5'-phosphoribosyl)-4-imidazolecarboxamide isomerase hisF 2095879 - 2096655 + | imidazole glycerol phosphate synthase, catalytic subunit with HisH hisI 2096649 - 2097260 + | fused phosphoribosyl-AMP cyclohydrolase ; phosphoribosyl-ATP pyrophosphatase TERM 2907 2097380 - 2097415 + T 100 -14.8 -3.57144 | opp_overlap 2097385, overlap 2097385 ATCGCATCCGGCAAA AAAAACGGGCAAGGTG TCAC CACCCTGCCCGTTTTC TTTAAAGCTGCAAAG TERM 2908 2097410 - 2097385 - T 100 -16.9 -5.75945 | opp_overlap 2097385 2097380 ATCCGGCAAAAAAAA CGGGCAAGGTG TCAC CACCCTGCCCG TTTTCTTTAAAGCTG TERM 2909 2097385 - 2097410 + T 100 -14.7 -4.87803 | opp_overlap 2097385, overlap 2097380 ATCCGGCAAAAAAAA CGGGCAAGGTG TCAC CACCCTGCCCG TTTTCTTTAAAGCTG cld 2098409 - 2097432 - | regulator of length of O-antigen component of lipopolysaccharide chains TERM 2910 2098234 - 2098245 + g 81 -5.8 -4.86731 | TGAGTAACGATAGCT GTGG AAGT CCAC TTTTCTTTGGCAACG TERM 2911 2098545 - 2098525 - R 100 -15.5 -3.83921 | GGGAACATAAGAGAA TCAGGGCGA AAA TCGCCCTGA TAACAAGATGTTAGT ugd 2099722 - 2098556 - | UDP-glucose 6-dehydrogenase TERM 2912 2099943 - 2099921 - R 100 -7.6 -5.77853 | opp_overlap 2099921 AATTGGCAAAAAAAA GCCCGATGCA ATA TACGCCGGGC TTCAATTTTATTGTT gnd 2101377 - 2099971 - | gluconate-6-phosphate dehydrogenase, decarboxylating rmlA 2102424 - 2101558 - | glucose-1-phosphate thymidylyltransferase TERM 2913 2102551 - 2102577 + r 90 -4.6 -5.51402 | overlap 2102556 CTCCAGCTTATTTAC TTGTATTAAATG TCA CATTTAATCTAA TTTTTTTAGGTATGT wbvC 2103099 - 2102569 - | putative O-acetyltransferase wzy 2104156 - 2103065 - | O-antigen polymerase TERM 2914 2103971 - 2103961 - GR 74 -2.6 -5.02715 | ATACCAAAGTAAAAA TAAA TAT TTTA TCCACTACGCCAAAG wbvB 2105126 - 2104149 - | putative glycosyl transferase wzx 2106375 - 2105113 - | putative O antigen flippase TERM 2915 2105307 - 2105289 - G 70 -6 -4.20092 | opp_overlap 2105293, overlap 2105286 2105291 ATAATAAAAATACAA GACACCAT TTA ATGGTGTA ATAGTAGTAACTCTT TERM 2916 2106133 - 2106123 - G 100 -4 -5.75945 | ATCTTGCAAAAAAAA TTGT ATT ACAA TAAATCAATTTCTTG wbvA 2107360 - 2106362 - | hypothetical protein tll 2108177 - 2107362 - | putative dTDP-6-deoxy-D-xylo-4-hexulose reductase rmlC 2108782 - 2108240 - | dTDP-6-deoxy-D-glucose-3,5 epimerase rmlB 2109936 - 2108854 - | dTDP-glucose 4,6 dehydratase, NAD(P)-binding TERM 2917 2110268 - 2110213 - R 71 -4.9 -4.52857 | gap 1, opp_overlap 2110243 ATTGTTTATATAAAA CAACGGCAG-GAATATTCGCAACAAA TTACT TTCGCCACGAATCTTCACTGTCGTTA TAATTTTCTTATCAA galF 2111201 - 2110308 - | putative subunit with GalU wcaM 2112770 - 2111376 - | putative colanic acid biosynthesis protein TERM 2918 2111589 - 2111627 + g 70 -5.3 -4.39998 | TCCAACAGAGGATTT CTGCATCACCTTGATAT TACGC ATAAAAAGGTGTTGCGG TTTATTGTGTAGCTC TERM 2919 2112732 - 2112714 - G 70 -10.3 -3.18383 | AGGGGTATGGAGGAA GGCAAGC GCCGA GCTTGCC GTCAGGAAGGTGCGT wcaL 2114001 - 2112781 - | putative glycosyl transferase TERM 2920 2113417 - 2113427 + g 74 -2.4 -5.03145 | GGCGATTTTTTCCCT CGGG CAG CCCA TTTTTTGCAGCCTTC TERM 2921 2113999 - 2113987 - G 71 -3.4 -4.75404 | opp_overlap 2113987 AAATTTCAGTAAAAA GAAG CCGAC CTTC ATTTCACCTCCCCGA wcaK 2115278 - 2113998 - | putative pyruvyl transferase TERM 2922 2114541 - 2114572 + g 75 -4.4 -4.73682 | gap 1 GAGACGTTTGTCGAA CGGTGCCAGTT-CGC GCA GGGTAATTGCCACCG TTTTCTGTTGTGCGG TERM 2923 2115434 - 2115393 - R 100 -12.9 -3.54951 | opp_overlap 2115398 2115408 2115409, overlap 2115408 2115409 GACCCGAGCACAGAA CCGTAGGCCGGATAAGGCG TTCA CGCCGCATCCGGCATTCAG TGCCTGATGCGACGC TERM 2924 2115398 - 2115429 + r 73 -10 -3.08464 | opp_overlap 2115393 2115408 2115409, overlap 2115408 2115409 GAGCACAGAACCGTA GGCCGGATAAGGCG TTCA CGCCGCATCCGGCA TTCAGTGCCTGATGC TERM 2925 2115456 - 2115408 - R 83 -11.6 -3.30124 | opp_overlap 2115398 2115408 2115409 2115455, overlap 2115393 2115409 CCGTAGGCCGGATAA GGCGTTCACGCCGCATCCGGCA TTCAG TGCCTGATGCGACGCTGACGCG TCTTATCAGGCCTAC TERM 2926 2115408 - 2115458 + r 76 -10.5 -3.30124 | gap 2, opp_overlap 2115393 2115408 2115409, overlap 2115398 2115409 2115455 CCGTAGGCCGGATAA GGCGT-TCA-CGCCGCATCCGGCAT TCA GTGCCTGATGCGACGCTGACGCGTC TTATCAGGCCTACAG TERM 2927 2115455 - 2115409 - R 89 -15.1 -2.57931 | opp_overlap 2115398 2115408 2115409, overlap 2115393 2115408 CGTAGGCCGGATAAG GCGTTCACGCCGCATCCGGCA TTCAG TGCCTGATGCGACGCTGACGC GTCTTATCAGGCCTA TERM 2928 2115409 - 2115455 + r 86 -13.6 -2.5294 | opp_overlap 2115393 2115409 2115408, overlap 2115398 2115408 CGTAGGCCGGATAAG GCGTTCACGCCGCATCCGGCAT TCA GTGCCTGATGCGACGCTGACGC GTCTTATCAGGCCTA TERM 2929 2115455 - 2115507 + r 70 -7 -4.13767 | gap 1, opp_overlap 2115408 2115504 2115505, overlap 2115408 GATGCGACGCTGACG CGTCTTATCAGGCCTACAGGTCCCG AGCA CAGAACC-GTAGGATGGATAAGGCG TTTTACGCTGCACCC wzxC 2117032 - 2115554 - | colanic acid exporter wcaJ 2118428 - 2117034 - | putative UDP-sugar lipid carrier transferase cpsG 2119853 - 2118483 - | phosphomannomutase TERM 2930 2119879 - 2119901 + r 81 -3.4 -5.3658 | overlap 2119886 TTTTTCAGGCAATAG TTGGCCCT GACCGAA ACGGCCAA TTTTGTTTTTGTCGT TERM 2931 2120037 - 2119983 - R 70 -7.1 -3.88291 | gap 1, overlap 2120004 2120005 TATCAGGCCTACAAA TCCGAA-CCGTAGGTCGGATAAGGCG TTCA CGCCGCATCCGACAAACAGCTCCTGA TGCGACGTTTACACC cpsB 2121482 - 2120046 - | mannose-1-phosphate guanyltransferase wcaI 2122708 - 2121485 - | putative glycosyl transferase nudD 2123184 - 2122705 - | GDP-mannose mannosyl hydrolase fcl 2124152 - 2123187 - | bifunctional GDP-fucose synthetase: GDP-4-dehydro-6-deoxy-D-mannose epimerase and GDP-4-dehydro-6-L-deoxygalactose reductase gmd 2125276 - 2124155 - | GDP-D-mannose dehydratase, NAD(P)-binding wcaF 2125851 - 2125303 - | putative glycose-acyl transferase wcaE 2126613 - 2125867 - | putative glycosyl transferase wcaD 2127914 - 2126694 - | putative colanic acid polymerase TERM 2932 2127829 - 2127844 + gr 70 -6.1 -4.19238 | GTGATGGGGAAACTT TCGCC AAGCTG GGCGA TTTTGACGTTAACCA wcaC 2129106 - 2127889 - | putative glycosyl transferase TERM 2933 2128918 - 2128900 - GR 70 -6.7 -4.09503 | opp_overlap 2128912 AAACAGACGAAACAA CGCAATG TTCGC CATCGCG GTCATCCGCGGCGTA wcaB 2129591 - 2129103 - | putative acyl transferase wcaA 2130433 - 2129594 - | putative glycosyl transferase TERM 2934 2130551 - 2130518 - R 70 -10.3 -2.52464 | opp_overlap 2130508 2130545, overlap 2130528 2130530 TGCGGCGTGAACGTA GGTCGGATAAGATGC GTCA GCATCGCATCCGACA ACGGATCTCGTTATT wzc 2132724 - 2130562 - | protein-tyrosine kinase wzb 2133170 - 2132727 - | protein-tyrosine phosphatase wza 2134315 - 2133176 - | lipoprotein required for capsular polysaccharide translocation through the outer membrane TERM 2935 2135748 - 2135704 - g 75 -11.3 -2.90075 | opp_overlap 2135713, overlap 2135702 TTTCCGCTAACCAGA CGCTGCGCCAGCGGACTACCG AAG CGGTAATGCGCCTGCTTAGCG GGCAAAAAGAAGATG TERM 2936 2136390 - 2136378 - g 70 -4.1 -4.72272 | overlap 2136379 CCGCTGGATGAAAAA CGTGA ATA TCACA CCATTGCCGGGCTAT yegH 2134974 - 2136557 + | fused putative membrane protein ; putative membrane protein TERM 2937 2136597 - 2136563 - f 100 -13 -4.4017 | opp_overlap 2136565 2136570, overlap 2136565 CGAAGTGTGATAAAA CATCAAATGCGCAGGT TCA AACTGCGCATTTGATT TATACAAAATTTAGT TERM 2938 2136595 - 2136565 - f 100 -15.6 -3.80535 | opp_overlap 2136565 2136570, overlap 2136563 AAGTGTGATAAAACA TCAAATGCGCAGGT TCA AACTGCGCATTTGA TTTATACAAAATTTA TERM 2939 2136565 - 2136595 + F 100 -15.6 -3.88583 | opp_overlap 2136565 2136563, overlap 2136570 AAGTGTGATAAAACA TCAAATGCGCAGGT TCA AACTGCGCATTTGA TTTATACAAAATTTA TERM 2940 2136570 - 2136590 + F 81 -9.7 -4.13995 | opp_overlap 2136565 2136563, overlap 2136565 TGATAAAACATCAAA TGCGCAGGT TCA AACTGCGCA TTTGATTTATACAAA ECS88_2161 2136632 - 2136970 + | hypothetical protein ECS88_2162 2136942 - 2137250 + | hypothetical protein TERM 2941 2137293 - 2137260 - T 93 -11.8 -3.87815 | opp_overlap 2137260, overlap 2137262 GCTTAGTGCTATAAA TACAGATGGCGACA AATTGA CGCCGCCATCTGCA TAACTTGTCTTACAT TERM 2942 2137291 - 2137262 - T 88 -12.2 -3.52906 | opp_overlap 2137260, overlap 2137260 TTAGTGCTATAAATA CAGATGGCGACA AATTGA CGCCGCCATCTG CATAACTTGTCTTAC asmA 2139156 - 2137303 - | putative inner membrane protein involved in outer membrane protein assembly TERM 2943 2137935 - 2137954 + g 74 -8.6 -3.8709 | overlap 2137936 2137942 TACCAATCTCAACGT TTTCCAGC CGTG GCTGGAAG TTTATCCGCGGATTT TERM 2944 2138290 - 2138319 + g 70 -7.1 -4.128 | GTCAAGATTCAGTTG CGGGAATTGCAGT CTCA GCTGCCATTCCGG TTTCTCTGTCAACGT dcd 2139759 - 2139178 - | 2'-deoxycytidine 5'-triphosphate deaminase udk 2140492 - 2139851 - | uridine/cytidine kinase TERM 2945 2141249 - 2141274 + G 75 -4.6 -4.81551 | overlap 2141250 TGGTTATCCTGCTGA CGCCCGGAGA CGATCC TCTCAGGGCA TTTTTGATATGGGTA TERM 2946 2141366 - 2141380 + G 95 -10 -4.67353 | ATCTGCTGCGCCATC GCAACC CAC GGTTGC TTTTTGAGTCGCTGC TERM 2947 2141965 - 2141944 - g 71 -2.9 -4.75174 | overlap 2141955 TATTCAATGGAAAAA CGCTACTAC AACC GCAATGGCG ATGTTGTCTGGGCGT yegE 2140810 - 2144127 + | putative diguanylate cyclase, GGDEF domain signalling protein alkA 2145086 - 2144238 - | 3-methyl-adenine DNA glycosylase II TERM 2948 2145324 - 2145306 - g 72 -5.2 -4.4874 | opp_overlap 2145307, overlap 2145307 GCTAAAAATGGAAAA CGACAGCA CGC TGCTGCCT TCAATGCTTTGCGCG TERM 2949 2146061 - 2146048 - g 73 -3.8 -4.81249 | GGCGAAACCGAAAAA GGCA TCGCGC TGCC GATTCTGCCGTGGTG yegD 2145220 - 2146572 + | putative chaperone TERM 2950 2146619 - 2146581 - T 80 -6 -4.74103 | gap 1, opp_overlap 2146580 2146581 TCGTTAATTGAAAAA TGGCTCAG-CAGCGGCT TAAATC AGCCTTCGCCTGAGCCA GTTTTTCTGCCGCCT yegI 2148534 - 2146585 - | hypothetical protein TERM 2951 2147327 - 2147314 - G 76 -8.1 -4.18164 | AAGGCCGCAAAACAA CAGCG ATAA CGCTG ACAGTGCGATCTCAA yegK 2149283 - 2148522 - | hypothetical protein TERM 2952 2148788 - 2148772 - G 71 -9.5 -3.53444 | TCAGTGCTGGTGAAA GTTTCCA GTC TGGAAAC GGCATCTTCATCGGT TERM 2953 2149019 - 2148998 - G 72 -5.2 -4.56597 | gap 1, overlap 2149000 CCGCCTCGGCAAAAA GTCGCTGAC GAATG GTCAGC-AC AATGTCCGTTGCGAG yegL 2149939 - 2149280 - | hypothetical protein TERM 2954 2149751 - 2149761 + g 72 -5.4 -4.56597 | GAACGTCACAATGCC GAGT TCC ACTC TTTTTAAGGCCAGCG TERM 2955 2150233 - 2150252 + H 91 -11.4 -3.71649 | opp_overlap 2150232, overlap 2150243 CTTTCCTTATTTAAG GCCCCTTC CTCG GGAGGGGC TTTCCCGTTTCAGCG TERM 2956 2150260 - 2150278 + H 81 -11.8 -3.09968 | overlap 2150272 GGAGGGGCTTTCCCG TTTCAGCG TCC CGCTGAAA TCTTCGGCTTACCTC TERM 2957 2150561 - 2150580 + H 93 -11.4 -4.35524 | opp_overlap 2150560, overlap 2150571 CTTTCCTTATTTAAG GCCCCTTC CTCG GGAGGGGC TTTTCCGTTTCAGCG TERM 2958 2151803 - 2151779 - g 70 -4.1 -4.70169 | overlap 2151780 CGATACCGAACAAAA CGCCGTGGTGA TCC CCACCGCCGCA CTGCAAATGGGCAAC mdtA 2150820 - 2152067 + | multidrug efflux system, subunit A TERM 2959 2152064 - 2152053 - f 80 -5.8 -5.09173 | opp_overlap 2152063 GAATACGCGAAAAAA GGAG CGCG CTCC TGATGCAGGTGTTAC TERM 2960 2152092 - 2152111 + G 72 -6.4 -4.33819 | opp_overlap 2152094 TACCTCCGAGCAGCA CAGGCG GCCCGTCG CGCCTG TTTATTATGCGTCCT TERM 2961 2153363 - 2153351 - g 81 -6.2 -4.7657 | overlap 2153343 GAAAAAGGCGAAAAA CCGC TGGCG GCGG CGCTCAAGGGCGCGG TERM 2962 2154166 - 2154176 + G 70 -6.8 -4.04318 | opp_overlap 2154160 GGAAAAACTCCAGCA GCTG CCA CAGC TTTCTGATGTCTCCA mdtB 2152067 - 2155189 + | multidrug efflux system, subunit B TERM 2963 2155664 - 2155716 + G 79 -12.7 -3.01924 | opp_overlap 2155672 2155695 2155696 CTGTACGATTTCGCC TCGACACAGCTGGCTCCGACGATTT CGC AAATCGACGGTGTCGGTGATGTCGA TGTTGGCGGCAGCTC TERM 2964 2157254 - 2157239 - g 86 -6.1 -5.08011 | opp_overlap 2157246 2157250 AAAATCCGCAAAAAA CTGGC GACATT GCCAG AGCTGGCTGATGTTA mdtC 2155190 - 2158267 + | multidrug efflux system, subunit C TERM 2965 2159596 - 2159608 + G 72 -6.2 -4.32857 | CATGGCGTTTATCAT CGCC CTTCC GGCG TTTGTCTTTGCCAGA mdtD 2158268 - 2159683 + | multidrug efflux system protein baeS 2159680 - 2161083 + | sensory histidine kinase in two-component regulatory system with BaeR TERM 2966 2161514 - 2161525 + G 70 -5.8 -4.15106 | AAGCCCGTTGATTAT CGAC GAAG GTCG TTTTCAGGCTTCCTG TERM 2967 2161712 - 2161700 - g 78 -5.5 -4.81551 | overlap 2161701 CAGCCACATTAAAAA CCTGC GCC GCAAG CTGGAATCTCTCGAC baeR 2161080 - 2161802 + | DNA-binding response regulator in two-component regulatory system with BaeS yegP 2161982 - 2162314 + | hypothetical protein ECS88_2180 2163053 - 2162439 - | conserved hypothetical protein; putative exported protein ECS88_2181 2165252 - 2163105 - | hypothetical protein TERM 2968 2164047 - 2164018 - GR 76 -6 -4.52589 | gap 1, opp_overlap 2164017 2164018 2164022, overlap 2164023 TTTTGGCAGATAAAA TTATATATCCAGA ATGAA TCTGGATA-ATAA CTTAATGCAAATTTT ECS88_2182 2165940 - 2165224 - | hypothetical protein ECS88_2183 2167154 - 2165940 - | hypothetical protein TERM 2969 2167024 - 2167037 + g 75 -5.3 -4.69664 | opp_overlap 2167024 2167035 AGCCATCGATAAAAA TGGTT GAGT AACCA TTTTTGGATGGTCTC TERM 2970 2167037 - 2167024 - G 80 -5.3 -4.88067 | opp_overlap 2167024, overlap 2167035 AGCCATCGATAAAAA TGGTT GAGT AACCA TTTTTGGATGGTCTC TERM 2971 2168388 - 2168374 - g 73 -9.2 -3.69395 | overlap 2168371 TTTATGATCGAAGAA GCCCAG CGT CCGGGC GAGTATATGACCGCG yegQ 2167642 - 2169003 + | putative peptidase TERM 2972 2169137 - 2169168 + T 87 -8.1 -5.03314 | overlap 2169140 CCAGGAACCACCTCC TTAGCCTGTGTAA TCTCCC TTACACGGGCTTA TTTTTTACGCGTAAC TERM 2973 2169140 - 2169165 + T 91 -9.8 -4.62085 | overlap 2169137 GGAACCACCTCCTTA GCCTGTGTAA TCTCCC TTACACGGGC TTATTTTTTACGCGT TERM 2974 2169262 - 2169245 - T 100 -12.7 -5.29782 | opp_overlap 2169241 2169239 2169245 CACATCGACAAAAAA GCCCCTC GACT GAGGGGC TTCCTGTTTGTAATT TERM 2975 2169245 - 2169262 + T 93 -12.7 -3.52009 | opp_overlap 2169245, overlap 2169241 2169239 CACATCGACAAAAAA GCCCCTC GACT GAGGGGC TTCCTGTTTGTAATT ogrK 2169494 - 2169276 - | DNA-binding transcriptional regulator; prophage P2 remnant GpD 2170739 - 2169576 - | Phage late control gene D protein (GpD) TERM 2976 2169782 - 2169800 + g 74 -8.8 -3.89614 | opp_overlap 2169781 2169780 GGCTGATGGAGAACT CCGCAACG CCC CGTTGCAG TTTATCCCACTTCGC TERM 2977 2170111 - 2170138 + g 85 -3.4 -5.42259 | gap 1, opp_overlap 2170097, overlap 2170114 TGATGGCGGTCGCCG TCGCTGCGGGTGA TGG TGACCTGCGG-GA TTTTTTTACCGCTGG GpU 2171218 - 2170739 - | tail assembly protein (GpU) GpT 2173680 - 2171233 - | tail fiber protein T (tape measure) (GpT) TERM 2978 2172387 - 2172409 + g 75 -4.7 -4.83615 | overlap 2172399 2172401 2172402 2172404 TTTTCATGTATTCAG CCTGCTGGG CAGTA CCGAGCCGG TTTTTCTCAAAACTG TERM 2979 2172630 - 2172643 + g 86 -6.7 -5.00884 | CGGCGGTTTCTTCAA TGCTG ACAC CAGCA TTTTTTGCCACAGGT TERM 2980 2173550 - 2173560 + g 82 -3.2 -5.19879 | overlap 2173534 2173533 GCGTGACCGTTCAGC TCGC GCA GTGA TTTTTGTGTTTCCCG GpE 2174100 - 2173825 - | tail protein E (GpE) ECS88_2190 2174675 - 2174157 - | Major tail tube protein (Protein FII) ECS88_2191 2175878 - 2174688 - | Major tail sheath protein (Protein FI) TERM 2981 2175978 - 2176006 + H 73 -10.2 -3.0439 | opp_overlap 2175983, overlap 2175975 2175983 GAAACAACAGATAAA GAAAAGGCGGGC AATTC GCCCGCCTGTCC TGATTTGTACTCACT TERM 2982 2176001 - 2175983 - H 100 -13.8 -5.08878 | opp_overlap 2175983 2175978 2175975 AACAGATAAAGAAAA GGCGGGCA ATT CGCCCGCC TGTCCTGATTTGTAC TERM 2983 2175983 - 2176001 + H 86 -13.1 -2.90798 | opp_overlap 2175983, overlap 2175978 2175975 AACAGATAAAGAAAA GGCGGGC AATTC GCCCGCC TGTCCTGATTTGTAC ECS88_2192 2176197 - 2176586 + | conserved hypothetical protein from phage origin; putative membrane protein ECS88_2193 2177295 - 2176609 - | site-specific recombinase, phage integrase family TERM 2984 2177154 - 2177169 + g 70 -6.1 -4.16016 | GAAGTGGCCTTTTTT GACCG ATGGTA CGGTC TTTATTCCACGGTGA TERM 2985 2177190 - 2177230 + g 100 -15.7 -3.58726 | opp_overlap 2177201, overlap 2177191 2177201 TCCACGGTGACGTTT TCATATTCAAATCTCCTGC AAT GTGGGAGATTTGAGTATGG TTGTCTCTCAAGAGC TERM 2986 2177191 - 2177229 + g 100 -17 -2.75022 | opp_overlap 2177201, overlap 2177190 2177201 CCACGGTGACGTTTT CATATTCAAATCTCCTGC AAT GTGGGAGATTTGAGTATG GTTGTCTCTCAAGAG ECS88_2194 2178142 - 2177300 - | conserved hypothetical protein from phage origin ECS88_2195 2179091 - 2178564 - | putative phage tail fiber assembly protein (GpG) ECS88_2196 2181830 - 2179095 - | putative phage tail fiber protein H (GpH) TERM 2987 2179325 - 2179339 + g 75 -5 -4.84642 | opp_overlap 2179319 AGGGATTAACACGCC CCGTAA TAT TTATGG TTTTATTACTTTGAA TERM 2988 2179876 - 2179887 + g 70 -5.8 -4.29106 | TTATTAATTTTACGG GCTG TTTT CAGC TTTGTTGCTGTCGCC TERM 2989 2181101 - 2181120 + g 72 -4.3 -4.72986 | gap 1, opp_overlap 2181104 2181105, overlap 2181105 TATTGAGATCAGCAT CAACCGGC ATTTC GCCG-TTG TTTTTCATAAACGTC TERM 2990 2181105 - 2181117 + g 74 -6.2 -4.47707 | opp_overlap 2181104 2181105, overlap 2181101 GAGATCAGCATCAAC CGGC ATTTC GCCG TTGTTTTTCATAAAC TERM 2991 2181590 - 2181574 - G 73 -11.5 -2.61912 | overlap 2181573 TCACGCATCCAGAAG CCGCCCA CTT CGGGCGG TACAACCAGTTCAGC ECS88_2197 2182371 - 2181841 - | Tail protein I (GpI) ECS88_2198 2183272 - 2182364 - | Baseplate assembly protein J (GpJ) ECS88_2199 2183624 - 2183277 - | Baseplate assembly protein W (GpW) ECS88_2200 2184292 - 2183621 - | Baseplate assembly protein V (GpV) TERM 2992 2183837 - 2183880 + g 72 -5.8 -4.43309 | gap 1 TTTCACCATGACTAC CGG-CACCGTGGCGGTAACAG AAT CAGAAGCCGTCACGCTGGCCG TTTTAATTCCGCTTA TERM 2993 2183962 - 2183986 + g 73 -11.3 -2.57344 | overlap 2183961 AACGTATGTGCAGGG CATCCGCCGAC GCA GACGGCGGAGG GTTATCGCCGGAATA TERM 2994 2184997 - 2184979 - g 72 -6.1 -4.31379 | overlap 2184991 ATGAATTTATTAAAA TCAGAAA AAAGA TTTCTGA ACGGCAGAAAGAGGT TERM 2995 2185007 - 2184991 - g 70 -5.2 -4.32919 | overlap 2184979 AAATCAGAAAAAAGA TTTCTG AACGG CAGAAA GAGGTTGCAAAAGAA ECS88_2201 2184381 - 2185481 + | hypothetical protein from phage origin TERM 2996 2185537 - 2185509 - T 100 -15.4 -3.67611 | gap 1, overlap 2185511 CGTATTCTAACAGAA GACTGCTGCCGGT AAGC ACCGGCAGCAG-C GATGAGGTGTCGGGA TERM 2997 2185536 - 2185511 - T 100 -19.1 -3.41738 | overlap 2185509 TATTCTAACAGAAGA CTGCTGCCGGT AAGC ACCGGCAGCAG CGATGAGGTGTCGGG ECS88_2202 2186014 - 2185562 - | Tail completion protein S (GpS) ECS88_2203 2186474 - 2186007 - | Tail completion protein R (GpR) TERM 2998 2186327 - 2186337 + gr 70 -6.8 -4.13767 | TCACAATGACATTGA GCGT GTA ACGC TTTTCGAATGACAGC ECS88_2204 2186844 - 2186437 - | putative host lysis related protein from prophage TERM 2999 2186509 - 2186533 + gr 74 -9.9 -3.28712 | overlap 2186511 TTTAATCATTTTTAC CTGGCTGGCAC AGC GTGCCAGCGCG TTCTCAAGCAGCCGG TERM 3000 2186511 - 2186532 + gr 74 -10.9 -2.57132 | gap 1, overlap 2186509 TAATCATTTTTACCT G-GCTGGCAC AGC GTGCCAGCGC GTTCTCAAGCAGCCG ECS88_2205 2187007 - 2186582 - | putative Protein lysB from bacteriophage P2 ECS88_2206 2187420 - 2186995 - | putative protein lysA from Bacteriophage P2 TERM 3001 2187440 - 2187476 + r 82 -7.2 -4.62783 | overlap 2187442 TTTACTCCGTTTAAG CCGGTACGCCG-CCGGCG GTA CGCCAGACGGTG-ACCAG TTTTTCCAGTGAATG ECS88_2207 2187932 - 2187435 - | putative Lysozyme (Lysis protein) (Muramidase) (Endolysin) (Protein gpK) TERM 3002 2187860 - 2187904 + g 72 -10.1 -3.28714 | overlap 2187849 2187859 TCGTCAGCGGATGAT TCGCCGTCCCTTC-CGACACG GCCAG CATGTCGAGAAAGG-CGGCGA TATTCTGATGCGTGT ECS88_2208 2188213 - 2187932 - | putative phage lysis protein Y, holin ECS88_2209 2188489 - 2188217 - | Tail protein X (GpX) ECS88_2210 2188989 - 2188420 - | Head completion/stabilization protein (GpL) TERM 3003 2188584 - 2188572 - GR 79 -9.1 -3.89614 | GGTAACGCTCATAAA GCGAC GCG GTCGC CATCGCACACACGGC ECS88_2211 2189772 - 2189029 - | Terminase, endonuclease subunit (GpM) ECS88_2213 2190633 - 2192174 + | transposase ORF1, IS21 family ECS88_2214 2192186 - 2192935 + | transposase ORF2, IS21 family TERM 3004 2192975 - 2192950 - T 76 -5.5 -4.75776 | gap 1, overlap 2192973 2192974 AAGGTAATTTAAAAA CGGTTC-TGTGA AAG TGACACGAACCG ATCTCCATCGATGTT TERM 3005 2193334 - 2193345 + T 70 -3 -5.0133 | CTGGGTGACCGACGG TTCA ACGG TGAA TTTTTTCGACACATC ECS88_2216 2194414 - 2193494 - | putative capsid scaffolding protein (GpO) from prophage P2 TERM 3006 2194490 - 2194516 + H 81 -11.6 -3.14051 | overlap 2194487 GGCGCGACTCAGTAG CCTTGCCGTG TATTCAT CACGGCGAGG TATTCATGACCATCA ECS88_2217 2194492 - 2196294 + | Terminase, ATPase subunit (GpP) TERM 3007 2196332 - 2196316 - g 74 -6.5 -4.55016 | overlap 2196318 AGAAAAAAGGGAAAA CACCGCA ACC TGCGGCA AAAACAATGACTGCC TERM 3008 2196330 - 2196318 - g 76 -9.1 -3.85072 | overlap 2196316 AAAAAAGGGAAAACA CCGCA ACC TGCGG CAAAAACAATGACTG TERM 3009 2196927 - 2196896 - g 72 -5.8 -4.33105 | overlap 2196916 2196919 CAAGTATTACGAAAA TGGCGCACATGCCG GATA CATCATGTACGTCA CCGATGCCGTGCAGG TERM 3010 2197121 - 2197107 - g 100 -7.8 -5.27779 | TTTAATATCAAAAAA GCCAGC GCC GCTGAC CTGCTGGACGCACAC ECS88_2218 2196294 - 2197328 + | putative portal vertex protein (GpQ) TERM 3011 2197334 - 2197349 + T 100 -11.8 -5.09225 | opp_overlap 2197332 2197330 CAACGACTGAACATC GCCGCC TGCG GGCGGC TTTTTTACATCCCGT ECS88_2219 2199602 - 2197668 - | conserved hypothetical protein from phage origin TERM 3012 2199460 - 2199446 - G 79 -4.3 -4.89852 | opp_overlap 2199446 GTATATGCATAAAAA CACTA TAATC TAGTG TTTCAAGCTCTTCCC ECS88_2220 2201941 - 2199617 - | Replication gene A protein (GpA) TERM 3013 2200047 - 2200059 + gr 100 -10.5 -4.62069 | opp_overlap 2200038 ACAGGACTCCGAGGC GCGGC GAT GCCGC TTTTTAAAGTCAAAG TERM 3014 2200700 - 2200690 - GR 88 -5.4 -5.31275 | opp_overlap 2200698 GTGGATTACAAAAAA GCAT CAT ATGC CAGTGCGGCGTTCCG TERM 3015 2201660 - 2201648 - GR 83 -6.2 -4.93877 | opp_overlap 2201648 2201647 TGTGAGGAAATAAAA CCCG TGCAC CGGG CTTTTATTGCGCCGG TERM 3016 2201741 - 2201781 + gr 73 -9 -3.53012 | opp_overlap 2201722 2201719 2201743 2201745, overlap 2201743 ATTAATCGTGGATAA AACACCTTGCACCTGACG CATCT CGTCACGTGTAAGGGGTC TTTCGCGCCCGACGG TERM 3017 2201743 - 2201779 + gr 83 -11.6 -3.34398 | opp_overlap 2201722 2201719 2201743 2201745, overlap 2201741 TAATCGTGGATAAAA CACCTTGCACCTGACG CATCT CGTCACGTGTAAGGGG TCTTTCGCGCCCGAC TERM 3018 2201779 - 2201743 - GR 86 -9.4 -4.386 | opp_overlap 2201743 2201741, overlap 2201722 2201719 2201745 TAATCGTGGATAAAA CACCTTGCACCTGACG CATCT CGTCACGTGTAAGGGG TCTTTCGCGCCCGAC TERM 3019 2201777 - 2201745 - GR 85 -10.6 -3.79687 | opp_overlap 2201743 2201741, overlap 2201722 2201719 2201743 ATCGTGGATAAAACA CCTTGCACCTGACG CATCT CGTCACGTGTAAGG GGTCTTTCGCGCCCG TERM 3020 2201847 - 2201823 - GR 95 -12.9 -3.36327 | GCATTCCATGCATAA GCACCGGTAAA CGT CTCACCGGTGC CTGCGGCAAATGCTG ECS88_2221 2202164 - 2201889 - | hypothetical protein ECS88_2222 2202385 - 2202161 - | hypothetical protein ECS88_2223 2202944 - 2202687 - | hypothetical protein TERM 3021 2202835 - 2202822 - G 73 -3.7 -4.83722 | opp_overlap 2202822 2202828, overlap 2202823 AAGATGAGAAGAAAA GCGCG TCGC CGCGT CGGCCTGTGCTTCGG ECS88_2224 2203475 - 2202975 - | Replication gene B protein (GpB) ECS88_2225 2203666 - 2203472 - | hypothetical protein cox 2203928 - 2203653 - | regulatory protein ECS88_2227 2204043 - 2204342 + | repressor protein C TERM 3022 2204427 - 2204413 - T 79 -4.2 -5.1861 | GCCACCACGAAAAAA GCGATT AGT AGTCGC AAAAAAACACACCAC TERM 3023 2204567 - 2204555 - T 75 -4.8 -4.77567 | opp_overlap 2204555, overlap 2204556 AGTTTGATAAGAAAA GCGA AGCTG TCGC TTTCGAGAAATACAC TERM 3024 2204644 - 2204620 - T 80 -8.6 -4.2679 | opp_overlap 2204637, overlap 2204608 GAATGGCTATCAAAA CCAACAGACA AGCGA CGTCTGTCGG AGCTGACACAGATCT yegR 2206219 - 2205902 - | hypothetical protein TERM 3025 2207117 - 2207103 - g 71 -2.7 -4.77757 | opp_overlap 2207107 CCGGAAAAATTAAAA GCCGC GCTGG GTGGC GTCTCTTACATCATT yegS 2206635 - 2207534 + | hypothetical protein TERM 3026 2207609 - 2207565 - T 100 -18.8 -3.646 | gap 1 TTGAACCAGAGAGAA TCCGTAATGCCGGATGCGGTG TAAA CACCTCATCCGGCAT-ACAGA ACAATACTACACCGT gatR 2208395 - 2207616 - | Galactitol utilization operon repressor TERM 3027 2208238 - 2208251 + g 74 -2.3 -5.06414 | opp_overlap 2208237, overlap 2208239 GCACCGCCATGAAAG CGCGT AACC ACGCC TTTTTGTTCGAGAAA TERM 3028 2208465 - 2208492 + r 73 -9.1 -3.54424 | gap 1, opp_overlap 2208464 2208466 2208467, overlap 2208466 TCTGTTTTGCACAAT AC-CGGGCCAGC ATCAC GCTGGCCCGCGG TTTCAGGGAATGAGC TERM 3029 2208466 - 2208491 + r 82 -12.6 -2.72511 | gap 1, opp_overlap 2208464 2208466 2208467, overlap 2208465 CTGTTTTGCACAATA C-CGGGCCAGC ATCAC GCTGGCCCGCG GTTTCAGGGAATGAG TERM 3030 2208490 - 2208466 - R 93 -13.5 -3.21276 | opp_overlap 2208466 2208465, overlap 2208464 2208467 CTGTTTTGCACAATA CCGGGCCAGCA TCA CGCTGGCCCGC GGTTTCAGGGAATGA TERM 3031 2208489 - 2208467 - R 100 -17 -2.52623 | opp_overlap 2208466 2208465, overlap 2208466 2208464 TGTTTTGCACAATAC CGGGCCAGCA TCA CGCTGGCCCG CGGTTTCAGGGAATG gatD 2209535 - 2208495 - | galactitol-1-phosphate dehydrogenase, Zn-dependent and NAD(P)-binding TERM 3032 2208645 - 2208669 + g 70 -9.9 -3.15544 | overlap 2208642 CGCCGTTTCCCACTC CTGCCCCGGCC AAG GGCTGGAGTAG TTCATCCAACTGCCG TERM 3033 2209571 - 2209555 - R 72 -9.4 -3.21218 | ACTCCTGATTATTAA GGGGGA TAACC TCCCCC TCAGGTAAAAATTAT gatC 2210938 - 2209583 - | galactitol-specific enzyme IIC component of PTS gatB 2211226 - 2210942 - | galactitol-specific enzyme IIB component of PTS gatA 2211709 - 2211257 - | galactitol-specific enzyme IIA component of PTS gatZ 2212981 - 2211719 - | D-tagatose 1,6-bisphosphate aldolase 2, subunit gatY 2213864 - 2213010 - | D-tagatose 1,6-bisphosphate aldolase 2, catalytic subunit TERM 3034 2213315 - 2213296 - G 71 -3.4 -4.85599 | overlap 2213300 2213301 TCCAGTCGAGAAAAA TCAAGCGC CGGT GCGCTGGC ATACATCCCATGAGC TERM 3035 2213901 - 2213911 + r 70 -2.6 -4.89966 | opp_overlap 2213901 TTCGATTTCAAAACA TAAT GAA ATTA TTTGTTTTTAAATGT TERM 3036 2214008 - 2213989 - R 100 -11.4 -5.89947 | GAAAGGCAAAAAAAA CGGCCTCC CGGG GGAAGCCG TAACAAAGTACGCGT TERM 3037 2214041 - 2214052 + r 72 -7.2 -4.09685 | TTTTATGCCGGATGT GGCG TTAA CGCC TTTTCCGGCCTACGG fbaB 2215145 - 2214093 - | fructose-bisphosphate aldolase class I TERM 3038 2215246 - 2215258 + H 76 -4.1 -5.08011 | overlap 2215244 ACGGGCGAGTTTTTC CATCT TTT GGATG TTTTTTCAGCGTTTT TERM 3039 2215425 - 2215409 - g 85 -8.7 -4.56729 | opp_overlap 2215409 2215412 ATTAAAAGATGAAAA CAACAGC AAA GCTGTCG TTCATGATGTTTGTT TERM 3040 2216180 - 2216190 + G 70 -4.6 -4.56597 | overlap 2216189 AAATCTTCTTTATGC TGGC ATT GCCG TTTTTCACCAAACGC TERM 3041 2216419 - 2216386 - g 79 -2.3 -5.252 | TATGTCGATAAAAAA GCCCCCGTGCA TATGCGTACTGC CGCGCAGGGGC TGATCACGCTCTGCT TERM 3042 2216553 - 2216586 + G 86 -12.5 -3.4727 | CGGGATGTGGACTTT CGGCGCGGTGATGAT TGCC ATTATCGCCGTGCTG TTCATGATTTTTTTC yegT 2215402 - 2216679 + | putative hydrophilic substrate transporter; MFS superfamily TERM 3043 2216993 - 2216981 - g 77 -3.3 -5.06414 | overlap 2216985 CGCCTTTAACAAAAA CGTAC TAG GTCCG ACCTCGAAGATTGCG yegU 2216676 - 2217680 + | putative (phospho)hydrolase TERM 3044 2217744 - 2217774 + G 80 -11.9 -3.33162 | gap 1, overlap 2217735 CGGTGATGGTCGTCG GCG-CGGCGGTCAT TGAT GTGATCGCCGACGC TTATGCCCTCCCCTG yegV 2217677 - 2218642 + | putative kinase yegW 2219362 - 2218616 - | putative DNA-binding transcriptional regulator TERM 3045 2218677 - 2218725 + g 93 -11 -4.39568 | opp_overlap 2218677, overlap 2218679 ATGCTGTACTCAATA GGCCGTTGCTGTTGGTCAAGCG CCACT TGCTTGATCACCAGCACCGGTA TTTTGCTATCTAACT TERM 3046 2218679 - 2218723 + g 100 -15.8 -3.79993 | opp_overlap 2218677, overlap 2218677 GCTGTACTCAATAGG CCGTTGCTGTTGGTCAAGCG CCACT TGCTTGATCACCAGCACCGG TATTTTGCTATCTAA TERM 3047 2219230 - 2219261 + g 83 -5.1 -5.12707 | gap 1, opp_overlap 2219229 2219230 CACCGGGCAAAATAT TGCCATGCTCCAGC ACCCC GCTGC-GCACGGCA TTTTTTACCGTTTCG TERM 3048 2219311 - 2219293 - G 78 -8.8 -4.25401 | CAAACTTAATATAAA GCGGCG TGTTATC CGCCGC TAAAATACGCTCGTT yegX 2220232 - 2219414 - | putative membrane-bound hydrolase TERM 3049 2219862 - 2219844 - G 70 -5.2 -4.41633 | opp_overlap 2219850, overlap 2219847 2219849 GACGGGGAAAAATAA TGATACGC CCC GCGCAGCA GGCCATTTTCGCGGC thiD 2221097 - 2220297 - | bifunctional hydroxy-methylpyrimidine kinase and hydroxy-phosphomethylpyrimidine kinase TERM 3050 2220763 - 2220749 - G 73 -9.2 -3.57144 | opp_overlap 2220750 2220752, overlap 2220734 CCGCCGATGGTGAAA GCAGCG GGT CGCCGC TTTTTGCCAGCATAA TERM 3051 2220752 - 2220763 + g 77 -7.2 -4.57569 | opp_overlap 2220734 2220749, overlap 2220750 CCGATGGTGAAAGCA GCGG GTCG CCGC TTTTTGCCAGCATAA thiM 2221882 - 2221094 - | hydoxyethylthiazole kinase yohL 2222377 - 2222105 - | hypothetical protein TERM 3052 2222636 - 2222604 - g 70 -4 -4.65895 | overlap 2222607 CGGGGCACTCAAAAA CGATGATGGCGGCG TTTAT CATCGCCATCAAAG GCACCATTAAACAGG rncA 2222498 - 2223322 + | nickel and cobalt resistance TERM 3053 2223405 - 2223423 + G 74 -7.4 -4.08919 | CTCTCTGCTCGCTAA GGATGCTT TTA GGGCATCC TTTCATTTACACTTT yohN 2223361 - 2223879 + | hypothetical protein TERM 3054 2223906 - 2223886 - T 100 -8.2 -5.76949 | overlap 2223887 CATCGCTAAAAAAAA GCCCCCTC GGAGA GAGGGGGG AATGCAGACACCTTA TERM 3055 2223905 - 2223887 - T 93 -11.7 -4.05085 | overlap 2223886 ATCGCTAAAAAAAAG CCCCCTC GGAGA GAGGGGG GAATGCAGACACCTT yehA 2224995 - 2223961 - | putative exported fimbrial-like adhesin protein TERM 3056 2224708 - 2224720 + g 79 -4.1 -5.14163 | GGTCTGATTATTTGA CAACG TAA TGTTG TTTTTATTGGTCCAT yehB 2227491 - 2225011 - | conserved hypothetical protein; putative outer membrane protein yehC 2228181 - 2227507 - | putative membrane-associated pilin chaperone TERM 3057 2228225 - 2228204 - R 100 -12.3 -4.54727 | opp_overlap 2228204 2228203 2228201 CCTCTTAAATTAAAA GGCCGCCAT GGAG ATAGCGGCC ATGTTAATTACCTGA TERM 3058 2228204 - 2228225 + r 70 -10.1 -2.5507 | opp_overlap 2228204, overlap 2228203 2228201 CCTCTTAAATTAAAA GGCCGCCAT GGAG ATAGCGGCC ATGTTAATTACCTGA yehD 2228804 - 2228262 - | putative fimbrial-like adhesin protein TERM 3059 2228891 - 2228906 + r 80 -6.2 -4.84642 | CAAAAAAAGTTGCCG CAATGT AAAC ACATTG TTTTATTGATTTAAA TERM 3060 2229036 - 2229065 + r 86 -11 -3.92641 | opp_overlap 2229036 2229057 AATATCAATAAAAAA GCTTAAATCATT CATGTA AATGATTTAAGC TTTCTAAATCCGATT TERM 3061 2229065 - 2229036 - R 100 -11.7 -5.54885 | opp_overlap 2229036, overlap 2229057 AATATCAATAAAAAA GCTTAAATCATTC ATGT AAATGATTTAAGC TTTCTAAATCCGATT yehE 2229379 - 2229098 - | hypothetical protein TERM 3062 2229612 - 2229580 - R 91 -9.9 -4.85782 | opp_overlap 2229584, overlap 2229555 TGCGGCAAAAACAAA TACACCGCATCAATG TAA CATCTCTGCGGTGTA TGAAGAATAATCAGA mrp 2230751 - 2229642 - | antiporter inner membrane protein TERM 3063 2231250 - 2231233 - g 93 -8.5 -4.86731 | TCGTCTGAAAGAAAA CGGTTTT ATTA AAAACCG CACCATCTCTCAGCT TERM 3064 2231295 - 2231282 - g 70 -3.8 -4.60487 | opp_overlap 2231287 TACGATCCGGAAAAA GGCA TGTTCC TGCC GGACCGTTTTGTAAA TERM 3065 2231924 - 2231912 - g 76 -9.1 -3.73775 | opp_overlap 2231908 GGCACCTTTATTAAA GCCAG CAC CTGGC TGAATCATTTTGACG TERM 3066 2232830 - 2232807 - g 76 -7.5 -4.21194 | gap 1 TGGCACCACGTAAAA TGCGCTTCGG TATCT CCGAAG-GCA TGGTAATGGCTGCTG metG 2230883 - 2232916 + | methionyl-tRNA synthetase TERM 3067 2232928 - 2232947 + F 100 -10.7 -5.01553 | ATAATCCCCCTTCAA GGCGCTG CATCGA CAGCGCC TTTTCTTTATAAATT TERM 3068 2234378 - 2234347 - g 100 -13.7 -3.84961 | GATCGAATGACGAAA GCCTGCGCTGCGT TCCCAC ACGCAGCACTGGC AGCACTGGCGGAACT TERM 3069 2234890 - 2234916 + G 70 -3.7 -4.70659 | CATGCACCGTATCAG GGGGAGTGG CATCTCAAC TCACTTCCC TTTTTACCTATGCAA TERM 3070 2236063 - 2236049 - g 74 -2.1 -5.04868 | CCAAACCAAACAAAA GCGAT GATGA ATCAC AGGCGAACGATGCTG TERM 3071 2236276 - 2236266 - g 70 -6.8 -4.10657 | opp_overlap 2236266 2236261 TTATAGCGCCGAAAA CCAG CTA CTGG CTTGCTTTCGCGTAG TERM 3072 2236396 - 2236414 + G 82 -7.4 -4.58395 | opp_overlap 2236387 ATATCACCGACGGAT GCTGCC GCCTTCG GGCAGC TTTTTGCCGACTACG TERM 3073 2236545 - 2236528 - g 72 -5.5 -4.45083 | overlap 2236530 TGGACAGGCAGAAAA TGCCCGA GTGG TCGGGTA ATGGGGCTGGCGAAT ECS88_2257 2233057 - 2236845 + | putative Molybdate metabolism regulator (molR) TERM 3074 2237884 - 2237850 - g 71 -2.1 -4.90217 | gap 1, overlap 2237851 TAAATACAGTAAAAA CTTCCCCCA-TGCGAC GCTC GCCGCACTGGCAGAAC TGCTGGCGTTAAAAG TERM 3075 2237956 - 2237943 - g 81 -4.5 -5.10767 | CATCGAAGACAAAAA GCTGC CTGC ACAGC AAAAAGCACGTGATG TERM 3076 2238183 - 2238173 - g 100 -2.4 -5.8187 | GAGGTAAGAAAAAAA CGGC ATT GCTG CGCCTTGATTTAGTG yehI 2236855 - 2240487 + | hypothetical protein TERM 3077 2240519 - 2240492 - f 71 -7.7 -3.73042 | opp_overlap 2240495, overlap 2240490 2240494 2240495 TTTTCCATTAAAACA CAGCGGGCAGT GATGCA ACTGCCCGTTA TCAACACGACCTACC TERM 3078 2240495 - 2240516 + F 83 -11.6 -3.28791 | opp_overlap 2240494 2240492 2240490 2240495 TCCATTAAAACACAG CGGGCAGT GATGCA ACTGCCCG TTATCAACACGACCT TERM 3079 2240516 - 2240495 - f 77 -11.6 -2.66321 | opp_overlap 2240495, overlap 2240494 2240492 2240490 TCCATTAAAACACAG CGGGCAGT GATGCA ACTGCCCG TTATCAACACGACCT ECS88_2260 2240570 - 2240740 + | hypothetical protein TERM 3080 2240973 - 2240951 - f 79 -12.1 -2.72049 | opp_overlap 2240955, overlap 2240955 GACAGGGGTGAACGA CAAATCCGC ATGGA GCGGATTTG AACGCTACTTGTAGC TERM 3081 2240969 - 2240955 - f 72 -7.1 -4.05446 | opp_overlap 2240955, overlap 2240951 GGGGTGAACGACAAA TCCGC ATGGA GCGGA TTTGAACGCTACTTG TERM 3082 2241100 - 2241081 - f 77 -9.3 -3.75461 | opp_overlap 2241076 2241072 2241081 TAAAGCTTTATTAAA GGGGGAA ACGGTA TTCCCCC TTAAATGCGTTTCAA TERM 3083 2241501 - 2241533 + F 93 -10.1 -5.07567 | opp_overlap 2241501 2241506 2241509, overlap 2241509 CGTCAAAGTTGTAAA TAAAAGAACCTGC CTCACCA GCAGGTTTTTTTA TTTTTTGCGATCTGC TERM 3084 2241533 - 2241501 - f 72 -8.6 -3.63968 | opp_overlap 2241501 2241509, overlap 2241506 2241509 CGTCAAAGTTGTAAA TAAAAGAACCTGCC TCACC AGCAGGTTTTTTTA TTTTTTGCGATCTGC TERM 3085 2241528 - 2241506 - f 74 -4.1 -4.88405 | opp_overlap 2241501 2241509, overlap 2241501 2241509 AAGTTGTAAATAAAA GAACCTGCC TCACC AGCAGGTTT TTTTATTTTTTGCGA TERM 3086 2241525 - 2241509 - f 72 -5.8 -4.54026 | opp_overlap 2241509 2241501, overlap 2241506 2241501 TTGTAAATAAAAGAA CCTGCC TCACC AGCAGG TTTTTTTATTTTTTG TERM 3087 2241509 - 2241525 + F 100 -5.1 -6.28401 | opp_overlap 2241506 2241501 2241509, overlap 2241501 TTGTAAATAAAAGAA CCTGC CTCACCA GCAGG TTTTTTTATTTTTTG TERM 3088 2242495 - 2242476 - g 81 -5 -5.08255 | overlap 2242477 ACGGCGAAAAGAAAA CGTCAATG GATA CACTGACA GCGATTATGTCCACC yehL 2241644 - 2242732 + | putative ABC superfamily protein yehM 2242739 - 2245015 + | hypothetical protein yehP 2245008 - 2246144 + | hypothetical protein TERM 3089 2246189 - 2246208 + G 70 -4.2 -4.63218 | opp_overlap 2246175, overlap 2246190 ACACCACAGGCACTG ACGGCGTT AAGC AATGCCGG TTTTGTTAAGCGCAG TERM 3090 2247750 - 2247762 + G 70 -5.5 -4.36914 | overlap 2247741 CCGTGAGCCTGGTTT CTGGC TTT GTCAG TTTTGTAGAGGGGCA TERM 3091 2247830 - 2247813 - g 93 -8.3 -4.93296 | TGATGATGACAAAAA CCCGCGC CTGG GCGCTGG ACGCAGAAACTGCGC TERM 3092 2248004 - 2248017 + G 75 -4.5 -4.85599 | opp_overlap 2248003, overlap 2248003 TTGCTGGCGAATGAC CTCAC CGCG GTGGG TTTTTATCGGCTGGC yehQ 2246141 - 2248144 + | hypothetical protein TERM 3093 2248223 - 2248239 + F 81 -10.9 -3.46081 | opp_overlap 2248219 TATCCTATATAGCCC CTGGTGA GAG TCACCAG TTCCTTGATTAAATA TERM 3094 2248388 - 2248362 - g 84 -8 -4.62392 | GAAGAATCAAAGAAA TTCAGCGCCAAT CTG AACGGCACTGAA ATTGCCATTACCTAT yehR 2248269 - 2248730 + | hypothetical protein yehS 2249241 - 2248771 - | hypothetical protein yehT 2250007 - 2249288 - | response regulator in two-component system with YehU yehU 2251689 - 2250004 - | sensory kinase in two-component system with YehT mlrA 2251911 - 2252642 + | DNA-binding transcriptional regulator yohO 2252702 - 2252809 + | hypothetical protein yehW 2253521 - 2252790 - | putative transporter subunit: permease component of ABC superfamily transporter TERM 3095 2253213 - 2253189 - G 72 -8.5 -3.83026 | TGGTTTCAGACCAAA GCCGATCACCG GAA CGGCAATCGCC AGCACTGCAACGGGC TERM 3096 2253298 - 2253276 - G 76 -9 -3.75169 | CACCAGTGGACGAAA TCCCGCGCCC CAA GGGCGAGTGA CAGCAATTCCGGCAC yehX 2254452 - 2253526 - | putative transporter subunit: ATP-binding component of ABC superfamily transporter yehY 2255602 - 2254445 - | putative transporter subunit: permease component of ABC superfamily TERM 3097 2255429 - 2255415 - G 75 -5.6 -4.64676 | overlap 2255391 2255417 TTAGCGGGAATAAAA CAGGCT GTC AGCCAG GCGCAACCAACGCCC TERM 3098 2255541 - 2255531 - G 74 -8.2 -3.97368 | overlap 2255532 TGCGTAACTGATAAA CGGC AGC GCCG CTGCGATTGCCGTCA yehZ 2256526 - 2255609 - | putative transporter subunit: periplasmic-binding component of ABC superfamily TERM 3099 2255686 - 2255703 + g 79 -3.5 -5.14563 | gap 1 CCACTGCAATGCTGG CATT-CAG CTG CTGCAATG TTTTTTCATCGAGGC bglX 2259013 - 2256716 - | beta-D-glucoside glucohydrolase, periplasmic TERM 3100 2256864 - 2256882 + g 75 -6.6 -4.37658 | CTGACGGTCTGAGTT TCGCCCGG TTT CAGGGTGA TTTTCTCAAAGCCTT TERM 3101 2257727 - 2257700 - G 70 -9.8 -3.16785 | overlap 2257698 2257696 TAGCACAGTAACAGA TTGATCGGCGAC ACCT GCCGCCGACCAG CTTCCCATCACGTCA dld 2259209 - 2260924 + | D-lactate dehydrogenase, FAD-binding, NADH independent TERM 3102 2260957 - 2260928 - T 100 -10.1 -5.33026 | gap 1, opp_overlap 2260924 2260928 2260929 2260931, overlap 2260929 GAAGTGAAATAAAAA TTACGGATGGCAGA GTA TC-GCCATCCGTAC TTCATTTAATCGTTC TERM 3103 2260928 - 2260957 + T 78 -10.1 -3.59233 | gap 1, opp_overlap 2260928 2260929, overlap 2260924 2260929 2260931 GAAGTGAAATAAAAA TTACGGATGGCAGA GTA TC-GCCATCCGTAC TTCATTTAATCGTTC TERM 3104 2260956 - 2260929 - T 100 -13.6 -3.78189 | gap 1, opp_overlap 2260928 2260924 2260929 2260931, overlap 2260928 AAGTGAAATAAAAAT TACGGATGGCAGA GTA TC-GCCATCCGTA CTTCATTTAATCGTT TERM 3105 2260929 - 2260956 + T 86 -13.6 -2.74817 | gap 1, opp_overlap 2260929 2260928, overlap 2260928 2260924 2260931 AAGTGAAATAAAAAT TACGGATGGCAGA GTA TC-GCCATCCGTA CTTCATTTAATCGTT TERM 3106 2260931 - 2260954 + T 80 -11.8 -2.91027 | gap 1, opp_overlap 2260929 2260928, overlap 2260929 2260928 2260924 GTGAAATAAAAATTA CGGATGGCAGA GTA TC-GCCATCCG TACTTCATTTAATCG pbpG 2261895 - 2260963 - | D-alanyl-D-alanine endopeptidase TERM 3107 2260991 - 2261007 + g 100 -10.8 -5.8096 | overlap 2260975 GCCGTCTGCCCCGCC GCCGCC ATTTG GGCGGC TTTTTGTTTTTTATA TERM 3108 2261508 - 2261518 + g 81 -8.2 -4.3739 | opp_overlap 2261493 GGTGCGCAAGACTTG CCGC CGC GCGG TTTTCTGAAGACATC TERM 3109 2262056 - 2262021 - R 100 -14.8 -3.75015 | overlap 2262022 AGAATCGTGAGGAAA TGCTGCATTGCTGACA TTTA CGCCAGCAATGCAGCG CAAAAGAACTTTCTA TERM 3110 2262055 - 2262022 - R 100 -18.3 -2.84527 | overlap 2262021 GAATCGTGAGGAAAT GCTGCATTGCTGACA TTTA CGCCAGCAATGCAGC GCAAAAGAACTTTCT yohC 2262656 - 2262069 - | conserved hypothetical protein; putative inner membrane protein yohD 2262826 - 2263404 + | conserved hypothetical protein; putative inner membrane protein TERM 3111 2263400 - 2263386 - T 80 -5.6 -5.06414 | GCGCGGGAAGAAAAA GCCGGA TCA TCAGGC GTAAAACTATTGCCC yohF 2264285 - 2263524 - | putative oxidoreductase with NAD(P)-binding Rossmann-fold domain yohG 2265426 - 2264338 - | conserved hypothetical protein; putative outer membrane protein TERM 3112 2264424 - 2264410 - G 73 -9.2 -3.61398 | CTGCCCTTGCAATAA CAGGCC ATT GGCCCG CTCACGCAGCGCCGG TERM 3113 2264494 - 2264475 - G 77 -12.1 -2.81815 | overlap 2264472 GGGAACCAGCAATGA GGCCCGC GTTAAA GCGGGCC TGCGCAAGACCTACT TERM 3114 2264827 - 2264812 - G 70 -4.6 -4.46926 | GATGTCAGGATAAAA TGCCGC TTTT GCCGCA TCAATAGTGCTTAAC TERM 3115 2266323 - 2266362 + r 100 -17.2 -2.71364 | TTCGCCAGAGCCCGG GGGTGCAGGGGGAGGA GGCGATTG TCCTCCCCCTGCGCGC TCCTTGCGCCAGTGG dusC 2267418 - 2266468 - | tRNA-dihydrouridine synthase C TERM 3116 2267460 - 2267438 - H 100 -12 -5.42259 | overlap 2267439 TCACCCGCAAAAAAA TGAGGCGCTA TGT TAGCGCCTCC GGTCAACGGATTAAA TERM 3117 2267459 - 2267439 - H 100 -15.5 -3.84633 | overlap 2267438 CACCCGCAAAAAAAT GAGGCGCTA TGT TAGCGCCTC CGGTCAACGGATTAA TERM 3118 2267481 - 2267520 + H 74 -9.5 -3.32993 | gap 2, opp_overlap 2267486, overlap 2267486 2267488 ACGGATTAAAGGTCT GCA-A-AGAGGGATTGCTG CAAA CTGCAATCCCTCTCTATGC TTGATGTATGCCTGA TERM 3119 2267513 - 2267486 - H 100 -14.2 -3.56594 | opp_overlap 2267481 2267486 2267488 TTAAAGGTCTGCAAA GAGGGATTGCTG CAAA CTGCAATCCCTC TCTATGCTTGATGTA TERM 3120 2267486 - 2267513 + H 89 -14.2 -3.0281 | opp_overlap 2267486, overlap 2267481 2267488 TTAAAGGTCTGCAAA GAGGGATTGCTG CAAA CTGCAATCCCTC TCTATGCTTGATGTA TERM 3121 2267488 - 2267511 + H 76 -11 -3.06361 | opp_overlap 2267486, overlap 2267486 2267481 AAAGGTCTGCAAAGA GGGATTGCTG CAAA CTGCAATCCC TCTCTATGCTTGATG TERM 3122 2267713 - 2267732 + G 90 -9.3 -4.4959 | TTTCGTCCTGATTTA TGCCTGC CTGTAT GCAGGCA TTTTCATTGCTTCCC yohJ 2267657 - 2268055 + | conserved hypothetical protein; putative inner membrane protein yohK 2268052 - 2268747 + | conserved hypothetical protein; putative inner membrane protein TERM 3123 2268757 - 2268767 + F 80 -6.8 -4.82154 | overlap 2268752 GGCTAAAATTTGCGA TGCG TCG CGCA TTTTTGATGTAAGTT cdd 2268877 - 2269761 + | cytidine/deoxycytidine deaminase TERM 3124 2269829 - 2269845 + F 86 -10.9 -4.15044 | opp_overlap 2269827 TGGTGTCGAAAATCC CGGCAAA CAG TTTGCCG TTTCTTGCGCAAAAC TERM 3125 2270502 - 2270512 + G 79 -4.6 -5.00884 | opp_overlap 2270502 CTTTATATTTTTAAA CGTG AAC CGCG TTTTTTAGGGCCGCT sanA 2269911 - 2270630 + | hypothetical protein TERM 3126 2270763 - 2270746 - g 75 -5.5 -4.60924 | opp_overlap 2270748, overlap 2270748 TAAACGGGTTAAAAA TGCACCG GAAC CGGTGTA TGTCTGGCGAGCGAA yeiS 2270633 - 2270872 + | conserved hypothetical protein; putative inner membrane protein TERM 3127 2271363 - 2271373 + G 85 -6.8 -4.76123 | CCCATTGATATCGGT CGCT TAC AGCG TTTTGTTACTGATTT yeiT 2271066 - 2272304 + | putative Fe-S cluster containing oxidoreductase subunit TERM 3128 2272801 - 2272790 - g 70 -5.8 -4.25104 | TGTCGGGCAGTAAAA CGTG GTTC CACG CTGCCAATGCTGGCG yeiA 2272298 - 2273533 + | putative oxidoreductase subunit TERM 3129 2273636 - 2273669 + T 81 -9.5 -3.98282 | overlap 2273637 2273649 GTTGTGCTCATTGTA GGCCGGATAAAACGC GCCA GCGTTGCATCCGGCA TTTGGTTCCTGTCGC TERM 3130 2273637 - 2273668 + T 86 -13 -2.98487 | overlap 2273636 2273649 TTGTGCTCATTGTAG GCCGGATAAAACGC GCCA GCGTTGCATCCGGC ATTTGGTTCCTGTCG mglC 2274786 - 2273776 - | methyl-galactoside transporter subunit ; membrane component of ABC superfamily TERM 3131 2274811 - 2274848 + r 74 -4.1 -4.96848 | opp_overlap 2274817 CTAATCTTAAAGGTG CAAAGACGCAAGACGCA GAAT TTCGCTTTGCGTTGTTG TTTTTGTATCGACAA mglA 2276322 - 2274802 - | fused methyl-galactoside transporter subunits of ABC superfamily: ATP-binding components TERM 3132 2275682 - 2275697 + g 78 -7.6 -4.38154 | opp_overlap 2275682 2275681 ACTTCATCACATAAC TGGAAG ATTT CTTCCA TTTTATGCGAGATAT TERM 3133 2276374 - 2276352 - R 100 -14.9 -3.88232 | opp_overlap 2276365, overlap 2276365 TTGGCCATACAATAA GGGCGCAGT AAACG ACTGCGCCC AATCAGTCTTATTTC mglB 2277381 - 2276383 - | methyl-galactoside transporter subunit ; periplasmic-binding component of ABC superfamily TERM 3134 2276484 - 2276500 + g 70 -4.3 -4.57569 | TGCCATCAGCCGCAC CTTTGCC ATC GGCCAGG TTTTTCGCCAGATCA galS 2278701 - 2277661 - | DNA-binding transcriptional repressor TERM 3135 2278804 - 2278815 + Gr 70 -3.6 -4.63932 | TCACAGCAATGGAAA CGGT TACA GCCG TTTTGTTAACGAATG yeiB 2280000 - 2278843 - | conserved hypothetical protein; putative inner membrane protein ECS88_2298 2278691 - 2278894 + | hypothetical protein TERM 3136 2279230 - 2279212 - GT 75 -8.8 -3.8186 | CATCTGAAGTAAGAA GGCGCACC AAC GATACGCC CAGTCCAGTCGCCAT TERM 3137 2279596 - 2279612 + gT 70 -3.6 -4.59773 | CAGATAAAGCATGAC GCCGGT ATTAA ACAGGC TTTTTACCGATGGCG TERM 3138 2279903 - 2279933 + gT 73 -9.1 -3.44848 | gap 1, opp_overlap 2279906 2279907, overlap 2279901 2279907 CAGGCGGGATTGAGA TAAGCCGCCTTTGG TAGC CCAAAGGCG-CTGA TGTTTAATAGCAGGA TERM 3139 2279930 - 2279906 - GT 81 -10.8 -3.51924 | gap 1, opp_overlap 2279903 2279901 2279907, overlap 2279907 GCGGGATTGAGATAA GCCGCCTTTGG TAGC CCAAAGGCG-C TGATGTTTAATAGCA TERM 3140 2279930 - 2279907 - GT 74 -11 -2.7094 | opp_overlap 2279907 2279903 2279901, overlap 2279906 CGGGATTGAGATAAG CCGCCTTTGG TAGC CCAAAGGCGC TGATGTTTAATAGCA TERM 3141 2279907 - 2279930 + gT 75 -11 -2.87501 | opp_overlap 2279906 2279907, overlap 2279903 2279901 CGGGATTGAGATAAG CCGCCTTTGG TAGC CCAAAGGCGC TGATGTTTAATAGCA folE 2280685 - 2280017 - | GTP cyclohydrolase I ECS88_2301 2280839 - 2281015 + | hypothetical protein TERM 3142 2281747 - 2281764 + GT 71 -8.4 -3.4582 | TTTATAGAGGATCAC CTGCGC TTCCAT GCGCAG TATTTACTGAAGTGA frmC 2280943 - 2281779 + | S-formylglutathione hydrolase TERM 3143 2281786 - 2281801 + T 79 -11.8 -2.56271 | opp_overlap 2281782 2281783, overlap 2281785 CTGAAGTGAAAGTCC GCCCGG TTCG CCGGGC ATCTTCTCATCAGAA cirA 2283802 - 2281811 - | ferric iron-catecholate outer membrane transporter TERM 3144 2281991 - 2282005 + g 78 -9.2 -3.87373 | CGGTGTTTTAGCCGT CGCGCT GTC GGCGCG TTTCTGCCCGGTATA TERM 3145 2282172 - 2282193 + g 72 -5.9 -4.30448 | overlap 2282185 TAGTTGATCGACAGT TTCCATTCA TCGT TGAACGGAA TTTTCAGTTCGGTTT TERM 3146 2284072 - 2284053 - R 100 -13.6 -4.75776 | AATGGAATTGAAAAA GCCCTCTC GGTT GAGAGGGC TTAGCAAGGAAGGGA lysP 2285563 - 2284094 - | lysine transporter TERM 3147 2284991 - 2284956 - G 70 -6.8 -4.08945 | gap 1, opp_overlap 2284966 2284967, overlap 2284967 ATCATCGCCGCAAAA CCACCAG-CAAACGGCG CTT CGCCGATTGTCCAGTTG CTCCAGCCCGCAGGC TERM 3148 2284979 - 2284967 - G 84 -10.5 -3.83705 | opp_overlap 2284967 2284966, overlap 2284956 AAAACCACCAGCAAA CGGCG CTT CGCCG ATTGTCCAGTTGCTC ECS88_2305 2285855 - 2285547 - | hypothetical protein yeiE 2286649 - 2285768 - | putative DNA-binding transcriptional regulator TERM 3149 2287445 - 2287419 - g 75 -6.6 -4.42386 | CCCGGATGCAGAAAA CGCAGCAGTT ATTTCCA AAATGCTGCG CGTGATGATGCTGGC TERM 3150 2287717 - 2287699 - g 71 -2.2 -5.00884 | AGCGCGCTGAAAAAA GCCGGGGC GAA ACCTCTGC TGATGGCACTGGTAC yeiH 2286748 - 2287797 + | conserved hypothetical protein; putative inner membrane protein nfo 2287871 - 2288728 + | endonuclease IV with intrinsic 3'-5' exonuclease activity TERM 3151 2289127 - 2289117 - g 78 -8.2 -4.18934 | overlap 2289118 CATTACTGGAAGAAA CGCG CCG CGCG GGCGTGAACGTTTCA yeiI 2288732 - 2289820 + | putative kinase TERM 3152 2290076 - 2290041 - T 93 -11.8 -3.96148 | opp_overlap 2290043, overlap 2290043 TCTGCCCATCATAAA TAGCCGGGCCTGCATC TTGC GATACTGACCCGGCTT GTTATCAACACTTAA TERM 3153 2290074 - 2290043 - T 100 -14.4 -3.57406 | opp_overlap 2290043, overlap 2290041 TGCCCATCATAAATA GCCGGGCCTGCATC TTGC GATACTGACCCGGC TTGTTATCAACACTT TERM 3154 2290043 - 2290074 + T 80 -10 -3.79678 | opp_overlap 2290041 2290043 TGCCCATCATAAATA GCCGGGCCTGCATC TTGC GATACTGACCCGGC TTGTTATCAACACTT rihB 2291029 - 2290088 - | ribonucleoside hydrolase 2 TERM 3155 2290142 - 2290165 + g 100 -11.8 -4.66537 | opp_overlap 2290139 2290142 TAATCCCCAGAACCA GTCGGTATCA ATAG TGATGCCGAC TTTTGTATTGGCGGG TERM 3156 2291236 - 2291262 + G 71 -2.1 -5.02074 | opp_overlap 2291236, overlap 2291241 TTGCTTTTCAACGGA TGTTTCAGCCG ATACG CGGCTGTTTCA TTTTTTAGCGCGTGA TERM 3157 2291241 - 2291257 + G 86 -9.4 -4.42765 | opp_overlap 2291236, overlap 2291236 TTTCAACGGATGTTT CAGCCG ATACG CGGCTG TTTCATTTTTTAGCG TERM 3158 2291300 - 2291314 + G 76 -7.8 -4.18018 | GTGCAGGAAGGGCAA CAGCCG TCC TGGCTG TTTTACCTGACGCGA TERM 3159 2291320 - 2291341 + G 73 -11.5 -2.79175 | overlap 2291319 GTCCTGGCTGTTTTA CCTGACGCG AGGC CGCGCCAGG CTTTACGTCACGCTT yeiL 2291198 - 2291857 + | DNA-binding transcriptional activator of stationary phase nitrogen survival yeiM 2293174 - 2291924 - | putative sodium/proton nucleoside transporter TERM 3160 2292385 - 2292402 + g 70 -6.9 -4.08216 | overlap 2292383 ATGCCATTACCACCG TCGCCAC ACCG GCGGCGA TTTTCAGCCCAGTCA TERM 3161 2293162 - 2293179 + g 70 -5.7 -4.30014 | TCCCCACAACACTTC TCATTAT ATCC ATAATGA TTTTCCCTTCATGCC TERM 3162 2293218 - 2293201 - R 80 -10.5 -3.74693 | opp_overlap 2293201 CTTCATGCCAGTAAA CCCGGCG TCAG CGCCAGG TTTTGGTATGTTTGA TERM 3163 2293201 - 2293218 + r 87 -8.3 -4.46493 | opp_overlap 2293201 CTTCATGCCAGTAAA CCCGGCG TCAG CGCCAGG TTTTGGTATGTTTGA yeiN 2294206 - 2293268 - | hypothetical protein TERM 3164 2293307 - 2293319 + g 73 -9.1 -3.61517 | TTTGGCAATTTCGCT CGCCA GAA TGGCG TTATTAAAGACCAGT yeiC 2295249 - 2294194 - | putative kinase TERM 3165 2295403 - 2295384 - R 93 -9.3 -5.10461 | opp_overlap 2295397 GGCAGGCAAGAAAAA GGGCAGA GATGTT TCTGCCC TCAGATTGTTGACAA TERM 3166 2295537 - 2295590 + r 89 -12 -3.6185 | gap 2, opp_overlap 2295535 GCGCATCAGGCAATT TTGCGTTTGTCATCATCGGGGCAGAG ATGT CTCAGCCCCGATGATGA-AGA-GAAA TTATGCGTTTTTTTC fruA 2297282 - 2295591 - | fused fructose-specific PTS enzymes: IIBcomponent ; IIC components TERM 3167 2297012 - 2296991 - G 74 -10.9 -3.14344 | gap 1, opp_overlap 2296978 GACCGCTGGCAGCAA CCGGT-GCTG TCG CAGCGACCGG CGCAGTGTAAGGTTT fruK 2298237 - 2297299 - | fructose-1-phosphate kinase fruB 2299367 - 2298237 - | fused fructose-specific PTS enzymes: IIA component ; HPr component TERM 3168 2299382 - 2299402 + H 77 -10.5 -3.48276 | TAGTTCTCCTCTCTT GCTGAATTG AAA CGATTCAGC TTCTATGAGAAAAAA TERM 3169 2299454 - 2299418 - H 76 -2.9 -5.31275 | overlap 2299419 2299420 TTCTATGAGAAAAAA GCGCCAACCTGGCTT AGGGTTA AAGACAAGATCGCGC TGAAACGTTTCAAGA setB 2299734 - 2300915 + | lactose/glucose efflux system ECS88_2319 2301298 - 2300912 - | hypothetical protein TERM 3170 2301145 - 2301126 - Gg 72 -10 -3.27525 | gap 1, overlap 2301121 2301140 GGGCTGGAAATTGAA GGGGCAGTG CAA CAC-GCCCC GCAACCCGGACGGCA ECS88_2320 2301066 - 2301893 + | putative elongation factor TERM 3171 2301933 - 2301914 - fH 79 -7.8 -4.42386 | opp_overlap 2301914 GCCGCATGCAGAAAA GGGATAGC TCAG GCTGTCCC TTTTTTAATTTATTA TERM 3172 2301914 - 2301933 + FH 100 -10 -5.46129 | opp_overlap 2301914 GCCGCATGCAGAAAA GGGATAGC TCAG GCTGTCCC TTTTTTAATTTATTA yeiQ 2302116 - 2303582 + | putative sugar dehydrogenase, NAD-dependent TERM 3173 2303593 - 2303631 + F 74 -8.1 -4.03183 | opp_overlap 2303600 TTTAACGATTTCTGC GGTTAAAGCGGATGAAG CTCGC CTTCGTCCGCTCTCCCC TTCTCTTTTCTGCCT TERM 3174 2303624 - 2303600 - f 77 -10 -3.53091 | opp_overlap 2303593 ATTTCTGCGGTTAAA GCGGATGAAG CTCGC CTTCGTCCGC TCTCCCCTTCTCTTT yeiR 2303700 - 2304686 + | putative enzyme TERM 3175 2304746 - 2304736 - g 73 -4 -4.81734 | opp_overlap 2304736 AAATATGATTAAAAA TTTG CCG CAAA TAGTGTTGTTGAATA TERM 3176 2304986 - 2304976 - g 75 -4.6 -4.86731 | CTGGCTGAAAGAAAA CGCC CCT GGCA GACGACGTATCGTGA yeiU 2304725 - 2305438 + | undecaprenyl pyrophosphate phosphatase TERM 3177 2305787 - 2305798 + F 86 -2.2 -5.61596 | AGGTAATTAGTCTCG TGTC GCTT GGCA TTTTTTTATAACGAT TERM 3178 2306326 - 2306339 + G 70 -6.7 -4.08557 | overlap 2306325 GTTTGTCCATGCTTC CACCA GCAG TGGTG TTATTATTTCCAGCA spr 2305850 - 2306416 + | putative peptidase, outer membrane lipoprotein TERM 3179 2306483 - 2306466 - f 91 -11.3 -3.77219 | opp_overlap 2306466 ACGAGTTAACTGAAA GCACTGC TTAG GCAGTGC TTTTTTGTTTTCATT TERM 3180 2306466 - 2306483 + F 100 -11.3 -5.85244 | opp_overlap 2306466 ACGAGTTAACTGAAA GCACTGC TTAG GCAGTGC TTTTTTGTTTTCATT TERM 3181 2307089 - 2307070 - g 70 -4.9 -4.56597 | overlap 2307072 CCCTTTGCTGAAAAA TAGCGGC GTGTTT GCCGCTC TGAATCTCAACCTGA TERM 3182 2307087 - 2307072 - g 72 -7.5 -3.90048 | overlap 2307070 CTTTGCTGAAAAATA GCGGC GTGTTT GCCGC TCTGAATCTCAACCT TERM 3183 2307301 - 2307313 + G 73 -4.1 -4.7497 | CTGGACATGGAACGA TGTGT GGT ACGCA TTTTTACTGGGTGGC TERM 3184 2307431 - 2307462 + G 73 -9.6 -3.57144 | gap 1, overlap 2307431 CGCGAACAATTTTAC G-TGGTGTATCAACC GGT GGTTGATACACAAGC TTTGCGGGTAACGGG TERM 3185 2307879 - 2307897 + G 71 -9.6 -3.50447 | overlap 2307867 2307891 GCGCGCTTATCTATC TTGAGCGT TTT ACGCTCGA TTATCTGAAAATTGA rtn 2306597 - 2308153 + | hypothetical protein TERM 3186 2308318 - 2308345 + G 77 -8.5 -4.06055 | gap 1 GGAAAGCTATGCCTT TGCCGTACTGGG CGAAC CCCGGTACG-CA TTTAATTTCAACCAT TERM 3187 2309130 - 2309111 - g 79 -2.2 -5.25803 | gap 1, overlap 2309113 2309115 AATTTCGATAAAAAA TACATCATC AAA GATGA-GCA AAAGAACGAATCAGC yejA 2308235 - 2310049 + | putative oligopeptide transporter subunit ; periplasmic-binding component of ABC superfamily transporter TERM 3188 2310895 - 2310940 + G 80 -5.3 -5.02074 | overlap 2310908 TGTGTTCCGCAACGC CATGCTGCTGGTGATTGCCGG TTTT CCGGCGACGTTTATCAGCATG TTTTTTACCGGCTCG yejB 2310050 - 2311144 + | putative oligopeptide transporter subunit; permease component of ABC superfamily TERM 3189 2312009 - 2312029 + G 70 -11.2 -2.73875 | overlap 2312006 TCGGTCTGCCGCTCG GTTCACCG TCACT CGGTGAAC TGCTGTTACAAGGGA yejE 2311144 - 2312169 + | putative oligopeptide transporter subunit ; permease component of ABC superfamily transporter yejF 2312171 - 2313760 + | putative fused oligopeptide transporter subunits of ABC superfamily: ATP-binding components yejG 2314108 - 2313764 - | hypothetical protein TERM 3190 2314426 - 2314409 - R 76 -7.7 -4.26202 | opp_overlap 2314409 ACATGCATCAACAAA GGAAGCC TTTT AGCTTCC TCGTTGTGCAATAGA bcr 2315632 - 2314442 - | bicyclomycin/multidrug efflux system TERM 3191 2315124 - 2315110 - G 80 -11.4 -3.41878 | TTGCCGAAGCCAGAA TCGCCG CCA CGGCGA GGATCCAGAAGATGT rsuA 2316355 - 2315660 - | 16S rRNA pseudouridylate 516 synthase yejH 2316505 - 2318265 + | putative nucleic acid ATP-dependent helicase rplY 2318390 - 2318674 + | 50S ribosomal subunit protein L25 TERM 3192 2318690 - 2318719 + T 100 -15.9 -2.90219 | opp_overlap 2318697, overlap 2318697 TTGCTGAATAAGTTG TAAAAAACCCCGC TCCG GCGGGGTTTTTTG TCTCTGCAAATTATG TERM 3193 2318712 - 2318697 - T 100 -11.8 -5.06103 | opp_overlap 2318690 2318697 ATAAGTTGTAAAAAA CCCCGC TCCG GCGGGG TTTTTTGTCTCTGCA TERM 3194 2318697 - 2318712 + T 100 -11.8 -5.4251 | opp_overlap 2318697, overlap 2318690 ATAAGTTGTAAAAAA CCCCGC TCCG GCGGGG TTTTTTGTCTCTGCA TERM 3195 2318850 - 2318809 - T 71 -3.8 -4.74285 | gap 2, opp_overlap 2318832, overlap 2318810 ATTCAGAACACAAAA CCGATTAATTGC--CGCCAG ACGT CCGGCGCTGCAATTGATCGC GCAAGTTCGGCGGCG yejK 2319820 - 2318813 - | nucleotide associated protein TERM 3196 2319962 - 2319951 - H 100 -5.8 -6.04378 | opp_overlap 2319951 2319961 AAAGCAGAAAAAAAA CCGT TGCT ACGG TAATATGTTGCCCTT yejL 2320002 - 2320229 + | hypothetical protein TERM 3197 2320759 - 2320725 - g 70 -7.1 -4.09685 | opp_overlap 2320757 2320758 GTGGAGCTGGCAAAA GCTGCGCAGC-CTGACG CGT CGTCGGCGCTTCGC-GC GCCCGCTGGCCGCAT TERM 3198 2321086 - 2321099 + G 76 -8.1 -4.25104 | opp_overlap 2321079 2321084, overlap 2321098 TTCGAGAAGCAGATG CCTGC GCTG GCAGG TTTTGCTGAGCAAAA yejM 2320249 - 2322009 + | putative hydrolase, inner membrane-associated TERM 3199 2322176 - 2322193 + F 100 -7 -5.76633 | opp_overlap 2322176, overlap 2322168 AAAATCCCAAGAAAA CCAACC TATTGC GGTTGG TTTTTTTATATCTGC TERM 3200 2322193 - 2322176 - f 79 -7 -4.70613 | opp_overlap 2322176 2322168 AAAATCCCAAGAAAA CCAACC TATTGC GGTTGG TTTTTTTATATCTGC TERM 3201 2322220 - 2322251 + F 71 -4.4 -4.73682 | opp_overlap 2322224 CTGCATTTAATTCGA TAAACAGACAGCGA CACA TCACGGCCTGTTTA TTTTCTGTTATCAGA narP 2323379 - 2324026 + | DNA-binding response regulator in two-component regulatory system with NarQ or NarX TERM 3202 2324029 - 2324057 + T 100 -8.8 -5.35815 | opp_overlap 2324030 2324032, overlap 2324030 CGGGGCACAATAAAA ATAGCCCGATGG CATCA CCATCGGGCCAC TTTTTATTTACTCTC TERM 3203 2324030 - 2324056 + T 100 -12.3 -3.79862 | opp_overlap 2324030 2324032, overlap 2324029 GGGGCACAATAAAAA TAGCCCGATGG CATCA CCATCGGGCCA CTTTTTATTTACTCT TERM 3204 2324056 - 2324030 - T 100 -15.2 -5.18726 | opp_overlap 2324029 2324030, overlap 2324032 GGGGCACAATAAAAA TAGCCCGATGGC ATC ACCATCGGGCCA CTTTTTATTTACTCT TERM 3205 2324054 - 2324032 - T 100 -15.6 -4.22377 | opp_overlap 2324030 2324029, overlap 2324030 GGCACAATAAAAATA GCCCGATGGC ATC ACCATCGGGC CACTTTTTATTTACT ccmH 2325113 - 2324061 - | heme lyase, CcmH subunit TERM 3206 2324339 - 2324349 + g 81 -6.8 -4.62069 | CAGCGTATCCCAGTG CAGC ATC GCTG TTTTTCGGATCGAGG TERM 3207 2325120 - 2325108 - G 77 -3.3 -5.07486 | CACGCCCAATAAAAA CCTCA TTG TGCGG CCTCCTTACTGTATT ccmG 2325667 - 2325110 - | periplasmic thioredoxin of cytochrome c-type biogenesis ccmF 2327607 - 2325664 - | heme lyase, CcmF subunit TERM 3208 2326125 - 2326103 - G 72 -7 -4.2558 | TAGTTCTGACTAAAA GCAATGCCAA CAA TTGTCACTGC CAGCCCCAGGTGAGC TERM 3209 2327519 - 2327488 - G 78 -9.4 -3.9693 | gap 1 CAGCCAGGCAAACAA GCGGGAAGACGC-CA TCA TGCGCGCGTCCCCGC GCGCCACGCCCCATA ccmE 2328083 - 2327604 - | periplasmic heme chaperone ccmD 2328289 - 2328080 - | cytochrome c biogenesis protein TERM 3210 2328247 - 2328236 - G 95 -7.2 -5.42131 | CAACCAGACAAAAAA GGCG TAAC CGCC CATTGCGAAAAATTC ccmC 2329023 - 2328286 - | heme exporter subunit ; membrane component of ABC superfamily TERM 3211 2328443 - 2328408 - G 90 -7.5 -4.7629 | gap 1, opp_overlap 2328408 GCAGGAAGCCAAAAA TCGA-CCAGCGCAGCG GCGAA CGCATCGCCGGATCGA TACTTTGCTGCATCC ccmB 2329727 - 2329065 - | heme exporter subunit ; membrane component of ABC superfamily TERM 3212 2329196 - 2329180 - G 81 -10.8 -3.57797 | GGCAAATGCATAGAA GCCGCG TCCAT CGCGGC GGTGGCAAAGATGAG ccmA 2330347 - 2329724 - | heme exporter subunit ; ATP-binding component of ABC superfamily napC 2330962 - 2330360 - | nitrate reductase, cytochrome c-type,periplasmic TERM 3213 2330786 - 2330812 + g 81 -6.6 -4.66163 | ACGCATTTCGTGGCA GCTAATGCAGAA CTC TTCGGTATTGGC TTTTTCCATCCCGGT napB 2331421 - 2330972 - | nitrate reductase, small, cytochrome C550 subunit, periplasmic TERM 3214 2331086 - 2331063 - G 70 -5.9 -4.18674 | overlap 2331064 TGCAGACAGAAATAA CGACGCGGA GCCACT TCCGCGCCC ACTTTGCCGTCGCTG napH 2332281 - 2331418 - | ferredoxin-type protein essential for electron transfer from ubiquinol to periplasmic nitrate reductase (NapAB) TERM 3215 2331754 - 2331730 - G 86 -3.5 -5.35815 | overlap 2331744 TAGATCAAATAAAAA CAGCGCG AGAATAAGCAG CGCGCCG CTGCCGAAGCCCATT TERM 3216 2331758 - 2331744 - G 88 -11.4 -3.80174 | overlap 2331730 ACAGCGCGAGAATAA GCAGCG CGC CGCTGC CGAAGCCCATTACCA napG 2332963 - 2332268 - | ferredoxin-type protein essential for electron transfer from ubiquinol to periplasmic nitrate reductase (NapAB) TERM 3217 2332825 - 2332856 + g 81 -12.4 -3.21276 | gap 1, overlap 2332829 TGGCTCCGGGCGGGC GCAA-CCGCACGC CAGATGC GCGTGCGGTTTGC TGTTGTAACCCCAGC TERM 3218 2332829 - 2332851 + g 90 -12 -3.97088 | overlap 2332825 TCCGGGCGGGCGCAA CCGCACGC CAGATGC GCGTGCGG TTTGCTGTTGTAACC napA 2335456 - 2332970 - | nitrate reductase, periplasmic, large subunit TERM 3219 2334417 - 2334435 + g 79 -3.7 -5.02476 | overlap 2334412 2334418 AACTGGTCTTTCGGC ACGCCGG TCATT TCGGCGG TTTTTTCCAGCGTAT napD 2335716 - 2335453 - | assembly protein for periplasmic nitrate reductase napF 2336200 - 2335706 - | ferredoxin-type protein, putative role in electron transfer to periplasmic nitrate reductase (NapA) TERM 3220 2336343 - 2336333 - g 70 -6.8 -4.08767 | CCGATCGGGGTAAAA CCTG TAG CAGG ATCAAAAGAGTGGCG TERM 3221 2336432 - 2336450 + G 73 -3.9 -4.80453 | gap 1 ATAGCGATTAATTCG CCAG-AGA TATT TCTGCTGG TTTGTTTTCTCATCA ECS88_2356 2336300 - 2336473 + | hypothetical protein eco 2336608 - 2337096 + | ecotin, a serine protease inhibitor TERM 3222 2337206 - 2337242 + T 93 -15.2 -2.71011 | opp_overlap 2337208 2337227 CGCGTCTTATCAGCA TACGCCACATCCGGCA AACCA TGCCGGATGTGGCACA TCATTACAACGCAAT TERM 3223 2337240 - 2337208 - T 100 -20 -2.82516 | opp_overlap 2337206, overlap 2337227 CGTCTTATCAGCATA CGCCACATCCGGCA AACCA TGCCGGATGTGGCA CATCATTACAACGCA mqo 2338892 - 2337246 - | malate dehydrogenase, FAD/NAD(P)-binding domain TERM 3224 2338300 - 2338310 + g 72 -6.8 -4.19624 | CCAATTTCCGTACGC GTGG CTG CCAC TTTCTGTTGCGGATC TERM 3225 2338524 - 2338494 - G 78 -9.6 -3.92641 | overlap 2338495 2338498 AACGGTATTGATAAA TGAACGCGGTGTAC GCA GCACGCCGCGCTCG ACCTGGTGCGCCCAG TERM 3226 2338523 - 2338495 - G 82 -13.1 -2.95102 | overlap 2338494 2338498 ACGGTATTGATAAAT GAACGCGGTGTAC GCA GCACGCCGCGCTC GACCTGGTGCGCCCA TERM 3227 2338520 - 2338498 - G 81 -11.2 -3.61988 | overlap 2338495 2338494 GTATTGATAAATGAA CGCGGTGTAC GCA GCACGCCGCG CTCGACCTGGTGCGC TERM 3228 2339099 - 2339069 - R 86 -12.6 -3.22475 | opp_overlap 2339061 2339059, overlap 2339067 2339070 GGTATTTTTAGAATA TTGACCTGGCGG CAGCAGT CCGCCAGGTCAG CGTCGTAATATTATG TERM 3229 2339098 - 2339070 - R 100 -16.1 -2.53271 | opp_overlap 2339061 2339059, overlap 2339069 2339067 GTATTTTTAGAATAT TGACCTGGCGG CAGCAGT CCGCCAGGTCA GCGTCGTAATATTAT yojI 2340753 - 2339110 - | fused multidrug transport subunits of ABC superfamily transporter: permease component/ATP-binding component TERM 3230 2339375 - 2339385 + g 79 -2.4 -5.28826 | opp_overlap 2339374 2339376, overlap 2339366 GCCAGCGCCAGCAAC AGCG CCA CGCG TTTTTTCTGCCCTTT TERM 3231 2340275 - 2340263 - G 75 -5.5 -4.70583 | overlap 2340264 2340267 GCCACCAATATAAAA CCACC CCA GATGG TGACTGCCATCCAGA alkB 2341479 - 2340829 - | oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA lesions ada 2342543 - 2341479 - | fused DNA-binding transcriptional dual regulator ; O6-methylguanine-DNA methyltransferase yojL 2343672 - 2342617 - | putative thiamine biosynthesis lipoprotein; defective assembly or repair of ThiH Fe-S cluster TERM 3232 2343769 - 2343742 - R 83 -12.8 -3.10622 | opp_overlap 2343749, overlap 2343749 TACGCTGAAAACAAT GAAAAAAGGGCC CGCA GGCCCTTTGTTC GATATCAATCGAGAT TERM 3233 2343762 - 2343749 - R 100 -9.5 -5.43514 | opp_overlap 2343749, overlap 2343742 AAAACAATGAAAAAA GGGCC CGCA GGCCC TTTGTTCGATATCAA TERM 3234 2343749 - 2343762 + r 84 -9.5 -4.23213 | opp_overlap 2343742 2343749 AAAACAATGAAAAAA GGGCC CGCA GGCCC TTTGTTCGATATCAA ompC 2344875 - 2343784 - | outer membrane porin protein C TERM 3235 2345276 - 2345294 + H 100 -14.6 -5.81032 | TTACCCCTATTTCAA CCGGATGC CTC GCATCCGG TTTTTTTTACCCTTC TERM 3236 2346981 - 2346955 - g 70 -5 -4.56978 | opp_overlap 2346963 CTGGTAAACAAGAAA CTCAAGCAGGCG CAG CGTCTGTATGAG AAAAACCAGCAGGGG TERM 3237 2347397 - 2347382 - g 71 -3.2 -4.81083 | CGCAATTAGGAAAAA TCACCC TTGA GGTTGA TCAGGATGAGTCCTC rcsD 2345614 - 2348286 + | phosphotransfer intermediate protein in two-component regulatory system with RcsBC rcsB 2348303 - 2348953 + | DNA-binding response regulator in two-component regulatory system with RcsC and YojN TERM 3238 2348963 - 2348996 + T 100 -14.7 -3.55622 | opp_overlap 2348973, overlap 2348964 2348976 GACTAATCACCTGTA GGCCAGATAAGACGC GTTA GTGTCTTATCTGGCA TTTGCACGGATTGCC TERM 3239 2348964 - 2348995 + T 100 -18.2 -2.73159 | opp_overlap 2348973, overlap 2348963 2348976 ACTAATCACCTGTAG GCCAGATAAGACGC GTTA GTGTCTTATCTGGC ATTTGCACGGATTGC TERM 3240 2349077 - 2349110 + T 77 -9.5 -3.61178 | opp_overlap 2349077 2349074 2349087 2349089 2349090, overlap 2349078 2349089 2349090 GATTACATTAAAGTA GGCCAGATAAGACGC GTCA GCGTCGCATCTGGCA TTTGCACTGAATGCC TERM 3241 2349110 - 2349077 - T 81 -11.7 -3.00585 | opp_overlap 2349077 2349078 2349089 2349090, overlap 2349074 2349087 2349089 2349090 GATTACATTAAAGTA GGCCAGATAAGACGC GTCA GCGTCGCATCTGGCA TTTGCACTGAATGCC TERM 3242 2349078 - 2349109 + T 85 -13 -2.76492 | opp_overlap 2349077 2349074 2349087 2349089 2349090, overlap 2349077 2349089 2349090 ATTACATTAAAGTAG GCCAGATAAGACGC GTCA GCGTCGCATCTGGC ATTTGCACTGAATGC TERM 3243 2349145 - 2349087 - T 81 -11 -3.51137 | opp_overlap 2349078 2349077 2349089 2349090, overlap 2349077 2349074 2349089 2349090 AAGTAGGCCAGATAA GACGCGTCAGCGTCGCATCTGGCATT TGCACTG AATGCCAGATGCGGCGTAAACGCCTT ATCCGTCCTACGATT TERM 3244 2349089 - 2349143 + T 100 -17.2 -3.37796 | opp_overlap 2349077 2349074 2349089 2349087 2349090, overlap 2349078 2349077 2349090 GTAGGCCAGATAAGA CGCGTCAGCGTCGCATCTGGCATTTG CAC TGAATGCCAGATGCGGCGTAAACGCC TTATCCGTCCTACGA TERM 3245 2349143 - 2349089 - T 100 -13.6 -3.32698 | opp_overlap 2349078 2349077 2349089 2349090, overlap 2349077 2349074 2349087 2349090 GTAGGCCAGATAAGA CGCGTCAGCGTCGCATCTGGCATT TGCACTG AATGCCAGATGCGGCGTAAACGCC TTATCCGTCCTACGA TERM 3246 2349090 - 2349142 + T 100 -20.7 -2.62463 | opp_overlap 2349077 2349074 2349090 2349089 2349087, overlap 2349078 2349077 2349089 TAGGCCAGATAAGAC GCGTCAGCGTCGCATCTGGCATTTG CAC TGAATGCCAGATGCGGCGTAAACGC CTTATCCGTCCTACG TERM 3247 2349142 - 2349090 - T 100 -17.1 -2.59298 | opp_overlap 2349078 2349077 2349089 2349090, overlap 2349077 2349074 2349089 2349087 TAGGCCAGATAAGAC GCGTCAGCGTCGCATCTGGCATT TGCACTG AATGCCAGATGCGGCGTAAACGC CTTATCCGTCCTACG rcsC 2351954 - 2349153 - | hybrid sensory kinase in two-component regulatory system with RcsB and YojN TERM 3248 2351398 - 2351366 - G 70 -7 -4.0371 | gap 1, overlap 2351353 2351388 2351389 GATTCGCCAGATAAA CTGGCGTCAAGGCGT AAAA ATACCC-GACGCCAG GGCGCGGACCTTCGC TERM 3249 2351620 - 2351599 - G 75 -4.5 -4.8543 | gap 1, overlap 2351603 TAAGCCGCAGAAAAA TTATCGCGCC AGT AGCGC-ATAA ACCACGCCAATGACT TERM 3250 2353337 - 2353295 - g 86 -9 -4.41348 | overlap 2353299 CTGCCCGCAAAGAAA CCCAGCGCCGCATGGCGC AAGCAGA ACGCCTCGCCACACTGGG TGAGCTGATGGCTGG TERM 3251 2353831 - 2353821 - g 91 -5.4 -5.40072 | opp_overlap 2353821 CTCGCTGCAAAAAAA GATC TTC GATC CCTTTTTCACTACCA atoS 2352169 - 2353995 + | sensory histidine kinase in two-component regulatory system with AtoC atoC 2353992 - 2355377 + | fused response regulator of ato opeon, in two-component system with AtoS: response regulator ; sigma54 interaction protein TERM 3252 2355431 - 2355386 - f 82 -9.1 -4.21936 | gap 1, opp_overlap 2355386 2355403, overlap 2355387 TGTATAACGCCAAAA CTTGCTATGCAGAAATTTGCAC AGT GCGCAGTTTTCTGCATAGCC-G CTCATTCTCCTTATG atoD 2355573 - 2356235 + | acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit atoA 2356235 - 2356885 + | acetyl-CoA:acetoacetyl-CoA transferase, beta subunit TERM 3253 2356898 - 2356913 + G 75 -6.8 -4.3739 | TGATTGGTCGCATAT CGCGTT TTAT GACGCG TTTTGTCAGCCGATG TERM 3254 2357175 - 2357157 - g 82 -11.7 -3.53012 | opp_overlap 2357152 2357150 CGCCTCCGCCGCAAA GACGCCC GTACA GGGCGTC ATGCTGGTTACTTTC TERM 3255 2357386 - 2357374 - g 72 -10.5 -3.01712 | CTGTTGGCTGCAACA CCGGG CAA CCCGG TTGAGCATATCGCCG atoE 2356882 - 2358204 + | short chain fatty acid transporter atoB 2358235 - 2359419 + | acetyl-CoA acetyltransferase TERM 3256 2359430 - 2359455 + T 95 -11.1 -4.65747 | opp_overlap 2359430 ATTAACATGTAAAAA CGCCCGATAGC GAAA GTCATCGGGCG TTTTCTTGAACATTG TERM 3257 2359455 - 2359430 - T 95 -11.1 -4.75308 | opp_overlap 2359430 ATTAACATGTAAAAA CGCCCGATAGC GAAA GTCATCGGGCG TTTTCTTGAACATTG yfaP 2360269 - 2359493 - | hypothetical protein TERM 3258 2359727 - 2359739 + g 82 -7.7 -4.57073 | CGTGACATCCATATC CAGTG CAC CACTG TTTTTCAGCACGGTG yfaQ 2361923 - 2360274 - | hypothetical protein TERM 3259 2360512 - 2360527 + g 95 -6 -5.40072 | overlap 2360513 TCATCTTGTAACACG CGCCGC CACT GCGGCA TTTTTTTCGCCAGCC TERM 3260 2360513 - 2360526 + g 76 -9.5 -3.83561 | overlap 2360512 CATCTTGTAACACGC GCCGC CACT GCGGC ATTTTTTTCGCCAGC TERM 3261 2361220 - 2361194 - G 70 -7.3 -4.11216 | gap 1 TCGGCACTGGCAAAA CCCGATTAAGCG CCGT CGCATAA-CGGG TCAGTACCGTTTTGC ECS88_2376 2366543 - 2361924 - | putative large extracellular alpha-helical protein TERM 3262 2363032 - 2363053 + gr 76 -10.9 -3.08639 | GGCATGTTGTCCGCC TGCTCGGCA TAAC TGTCGAGCA TATGTTGCCAGTATT TERM 3263 2365547 - 2365530 - GR 71 -2.7 -4.82901 | GCTTTCGTAGAAAAA GTTCTCG GAGA CAAAAAC GCCGCCTTCAGCATC TERM 3264 2365560 - 2365547 - GR 71 -2.3 -4.96848 | overlap 2365548 TCTCGGAGACAAAAA CGCCG CCTT CAGCA TCCTTACCCAGAATA TERM 3265 2365882 - 2365898 + gr 70 -6.5 -4.16921 | GGCGAAATGAAATTG CTGGATG CGC CTTCCAG TTTTACCCCTTGTTG TERM 3266 2366388 - 2366367 - GR 72 -5.1 -4.4831 | gap 1, opp_overlap 2366367 AGCGAGCAAAAAGAA TGTTCC-CCC GGC GGGCGGCACA TAGTTACTGGAAGGA yfaT 2367085 - 2366462 - | hypothetical protein TERM 3267 2366679 - 2366693 + gr 91 -11.4 -4.08706 | opp_overlap 2366672 AAAAAAATCATATCG CCAGGC AGT GCCTGG TTTATGTCCTGGCCA yfaA 2368770 - 2367082 - | hypothetical protein TERM 3268 2367995 - 2368010 + g 79 -4.6 -5.02074 | overlap 2368000 GCGCTGACCACGATG CGCTGG CGTA CTGGCG TTTTTTCGGCAGTAC TERM 3269 2368000 - 2368027 + g 75 -11.3 -3.01712 | overlap 2367995 GACCACGATGCGCTG GCGTACTGGCG TTTTTT CGGCAGTACGC TCTTCCAGGCCAAAG TERM 3270 2368041 - 2368056 + g 81 -4.6 -5.03314 | opp_overlap 2368042, overlap 2368042 GCTCTTCCAGGCCAA AGCTGG CTTG CCAGCG TTTTTTACCACTCAA TERM 3271 2368516 - 2368506 - G 78 -5.4 -4.73682 | TCTGATAATAGAAAA CGAA ATC TTCG CTCAGAACATCGTGG TERM 3272 2368623 - 2368649 + g 79 -2.3 -5.24129 | gap 1, overlap 2368624 GATCGATTTGCAGAT TGTTGTGCACCA CCAG TGGCG-ACAACG TTTTTTCTGGCCCAC TERM 3273 2368867 - 2368846 - R 87 -8.7 -4.55023 | opp_overlap 2368846, overlap 2368841 CCTAATACGACAAAA GCCCAGACT TTAC AGCCTGGAC TTTTCAATTCAAAAA TERM 3274 2368884 - 2368897 + r 74 -8.1 -4.13767 | opp_overlap 2368884 TTTCAATTCAAAAAA GGGAG ATGG CTCCC TTTTGGCATGAAGCG TERM 3275 2368897 - 2368884 - R 87 -8.1 -5.15969 | opp_overlap 2368884 TTTCAATTCAAAAAA GGGAG ATGG CTCCC TTTTGGCATGAAGCG gyrA 2371546 - 2368919 - | DNA gyrase (type II topoisomerase), subunit A TERM 3276 2370674 - 2370694 + g 82 -2.4 -5.45802 | overlap 2370666 AGACTCGTCACGCAG CGCGCTGA TGCCT TCCACGCG TTTTTCTTTTACCAG ubiG 2371693 - 2372415 + | bifunctional 3-demethylubiquinone-9 3-methyltransferase and 2-octaprenyl-6-hydroxy phenol methylase TERM 3277 2372471 - 2372515 + T 100 -16.7 -3.53811 | opp_overlap 2372512, overlap 2372443 2372460 ATGCGACGCTTGCCG CGTCTTATCAGGCCTAC AAATGCTCCCC GTAGGCCTGATAAGGCG TTTACGCCGCATCCG yfaL 2376319 - 2372555 - | adhesin TERM 3278 2372595 - 2372582 - G 73 -3.7 -4.87665 | overlap 2372583 2372584 TGTCATCGACAAAAA CCCTG CCGT CTGGG CAAAATCATCACTCC TERM 3279 2375193 - 2375177 - G 74 -8.7 -3.86916 | overlap 2375172 GACCATCAGACCAAA GCAATCC TGC GGATCGC TCTGACAGTGCGTGT TERM 3280 2375371 - 2375394 + g 72 -6 -4.36914 | overlap 2375364 2375372 CAATCGCGCCATCGT TGCTGGTATT GCCT ATTACCAGCG TTTTATCGGCGGCAA TERM 3281 2376017 - 2376030 + g 76 -8.1 -4.28487 | opp_overlap 2376017, overlap 2376012 CGAGTTATCAGCAAA CAGGG TCAT CCCTG TTTCATTTTGTGGTG TERM 3282 2377970 - 2377957 - g 77 -6.7 -4.56597 | GCTGGTGTTGAAAAA CAACC GTGG GGTTG AAGGCAACCGCGTGC nrdA 2376995 - 2379280 + | ribonucleoside diphosphate reductase 1, alpha subunit TERM 3283 2379315 - 2379330 + F 74 -6.8 -4.3898 | gap 1, opp_overlap 2379293 GCGTGAACGCCTTAT CCG-GCC TAC GGCTCGG TTTTGTAGGCCTGAT nrdB 2379427 - 2380557 + | ribonucleoside diphosphate reductase 1, beta subunit, ferritin-like yfaE 2380557 - 2380811 + | putative 2Fe-2S cluster-containing protein; putative oxidoreductase subunit inaA 2381515 - 2380865 - | hypothetical protein TERM 3284 2381682 - 2381711 + r 77 -11.5 -2.76833 | opp_overlap 2381678, overlap 2381681 2381684 TTTAATGAAGAGTGG TATCGGATAGCAC ATAA GTGCCATCCGGTA GTTAATTTACTCTTT TERM 3285 2381684 - 2381709 + r 70 -9.7 -2.91429 | opp_overlap 2381678, overlap 2381682 2381681 TAATGAAGAGTGGTA TCGGATAGCAC ATAA GTGCCATCCGG TAGTTAATTTACTCT glpQ 2382794 - 2381718 - | periplasmic glycerophosphodiester phosphodiesterase glpT 2384157 - 2382799 - | sn-glycerol-3-phosphate transporter TERM 3286 2383004 - 2383020 + g 79 -3.5 -5.08824 | opp_overlap 2382988 AGCCCGGTAAAACCC GCTGCCG TAC CTGCCGC TTTTTTCGGTGCCAG TERM 3287 2383436 - 2383455 + g 76 -4.2 -4.94972 | gap 1 ATGAAGATCTGCTTC GCGG-TCAG CTC CTGTTCCGC TTTTTCGTTATAGTC TERM 3288 2383893 - 2383878 - G 70 -6 -4.25104 | CTGCGGGCAGGAAAA CGCGCG GATT CGAGCG ATCCGATACCGAACC glpA 2384430 - 2386058 + | sn-glycerol-3-phosphate dehydrogenase (anaerobic) , large subunit, FAD/NAD(P)-binding TERM 3289 2386132 - 2386117 - g 72 -4.6 -4.66833 | CTGCAACTGCAAAAA CACGGC CTGC GCTGTG CCATTGTCACTCGTG TERM 3290 2387070 - 2387060 - g 74 -8.2 -3.86897 | TTGATGTGCTACAAA CCGC TAC GCGG GGTGAATGGTATAAG glpB 2386048 - 2387307 + | sn-glycerol-3-phosphate dehydrogenase (anaerobic) , membrane anchor subunit glpC 2387304 - 2388494 + | sn-glycerol-3-phosphate dehydrogenase (anaerobic) , small subunit TERM 3291 2388507 - 2388534 + F 100 -14.2 -4.65895 | TAAACTCCTTTCTGA TGCCCGGTAAGC ATGT GGTTACCGGGCA TTTTTGCGTACACGA TERM 3292 2388828 - 2388789 - g 71 -9.4 -3.4376 | gap 1, opp_overlap 2388825 ATACATTTACCAGAA CCACTGCGCAAGCTTTGCA ACC TGCAAACCTTACGCC-TGG AACCCACCAGTTTTA TERM 3293 2388825 - 2388838 + G 70 -3.8 -4.63218 | opp_overlap 2388789 CTGCAAACCTTACGC CTGG AACCCA CCAG TTTTATTGAAAAAAG yfaD 2388687 - 2389646 + | Conserved hypothetical protein, putative transposase ypaA 2389659 - 2389844 + | Conserved hypothetical protein, putative transposase (fragment) yfaU 2390688 - 2389885 - | putative 2,4-dihydroxyhept-2-ene-1,7-dioic acid-like aldolase TERM 3294 2391837 - 2391821 - R 73 -3 -5.03227 | gap 1 ATACCACAAAGAAAA TGC-CTG CTCC CAGCGCA TAAGCTTCATTACTC yfaW 2393269 - 2392052 - | putative epimerase/enolase/dehydratase TERM 3295 2393010 - 2392992 - G 78 -5.2 -4.77165 | TTTTCGACAATAAAA CAGCCCAT TTC ACCGGCTG TCGAAACGGCGAATC TERM 3296 2393026 - 2393036 + g 70 -4.6 -4.54821 | TCGAAACGGCGAATC CGGT CTG GCCG TTTTCTGCTTCGACT yfaX 2394054 - 2393272 - | putative DNA-binding transcriptional regulator TERM 3297 2394271 - 2394255 - R 71 -7.9 -3.72576 | TGCCGGTGCAGTAAA CCGGCAC AGA GTGGCGG AATCAGACAGATAAG yfaY 2395476 - 2394274 - | hypothetical protein TERM 3298 2394980 - 2394962 - G 87 -4.5 -5.27335 | gap 1, overlap 2394963 TGTGGTAAAGAAAAA CGCTCGCG CAGG CGCG-GCA GGATTTCGTGCTCGA TERM 3299 2395568 - 2395546 - R 71 -9 -3.38832 | overlap 2395559 2395560 TAGTAAGAAACTGAA TGGCGCGACA GAA CGCCGCGCCG GAAGGCGTCAGAAGC yfaZ 2396118 - 2395576 - | putative outer membrane porin protein yfaO 2396397 - 2396822 + | putative NUDIX hydrolase TERM 3300 2396850 - 2396829 - T 86 -13.1 -2.93073 | opp_overlap 2396819, overlap 2396812 2396826 CTTCTTTAACAATGA TGACAGCCA TCAC TGGCTGTCA GATTGAAAATTTAGT ais 2397463 - 2396861 - | hypothetical protein TERM 3301 2397309 - 2397330 + g 73 -3.7 -4.79352 | gap 1, overlap 2397311 ACGACAACCGGGTGC TGCTGTGCCA GTC TGGC-CAGTG TTTTATTGTCGATGC TERM 3302 2397881 - 2397892 + G 72 -4.4 -4.62471 | TCCGAAGAATCAGGC GCTT GAAC AAGC TTTTTGCCAGTTGAC yfbE 2397753 - 2398910 + | uridine 5'-(beta-1-threo-pentapyranosyl-4-ulose diphosphate) aminotransferase, PLP-dependent yfbF 2398914 - 2399882 + | undecaprenyl phosphate-L-Ara4FN transferase TERM 3303 2400104 - 2400116 + G 91 -7.7 -5.0432 | opp_overlap 2400104 CGCATTGCCCAACTA TCACC AGA GGTGA TTTTCTCTTTTTATT yfbG 2399882 - 2401864 + | fused UDP-L-Ara4N formyltransferase ; UDP-GlcA C-4'-decarboxylase yfbH 2401861 - 2402751 + | hypothetical protein TERM 3304 2402973 - 2402934 - g 75 -5.7 -4.59773 | opp_overlap 2402932 2402934 2402935 2402972, overlap 2402935 CGTTATTTCGAAAAA CCCATTGCCGGATACTG GATTAA CAGCATTGGGCAATGGC TATTTGGCGCGAATA arnT 2402751 - 2404403 + | 4-amino-4-deoxy-L-arabinose transferase yfbW 2404400 - 2404735 + | conserved hypothetical protein; inner membrane protein yfbJ 2404453 - 2405121 + | hypothetical protein pmrD 2405381 - 2405115 - | polymyxin resistance protein B menE 2406846 - 2405491 - | o-succinylbenzoate-CoA ligase menC 2407805 - 2406843 - | o-succinylbenzoyl-CoA synthase TERM 3305 2407205 - 2407222 + g 70 -6.9 -4.09511 | opp_overlap 2407204 2407207 TTTCACGGGCAAACG CACGCGA ATCA TCGCGGG TTTTGCACGGCTCTT TERM 3306 2407719 - 2407729 + g 85 -8.2 -4.57837 | opp_overlap 2407719 2407718 2407716 CAGGCAAACATACAG CCCG TCG CGGG TTTTTAACCGCCTGT menB 2408662 - 2407805 - | dihydroxynaphthoic acid synthetase TERM 3307 2408707 - 2408684 - R 82 -10.4 -3.91897 | gap 1, opp_overlap 2408697 TCCTTTAGTCAGAAA CGCAAGATCTG CGC CAGA-CTTGCG ATTACGCCAGCGGGA yfbB 2409435 - 2408677 - | putative thioesterase, menaquinone synthesis TERM 3308 2408712 - 2408737 + g 74 -9.7 -3.48276 | gap 1, overlap 2408697 CCAGACTTGCGATTA CGC-CAGCGGGA TTT TCCCGGTGCGCG TTATGTCCGGCGCGA TERM 3309 2408844 - 2408833 - G 86 -5.8 -5.06472 | ACATAAATAATAAAA CGCA AATG TGCG GGCGCTAAGGTTAGC TERM 3310 2409406 - 2409384 - G 72 -7.7 -3.91164 | opp_overlap 2409388 2409389 2409392, overlap 2409382 2409389 AACCGTGCAAAAACA CCAACCAGG GTAAA CCTGGTTTG CCGTGTTTTGCCTGC TERM 3311 2409389 - 2409411 + g 72 -7 -4.18494 | opp_overlap 2409384 2409382 2409389, overlap 2409388 2409392 TGCAAAAACACCAAC CAGGGTAAAC CTG GTTTGCCGTG TTTTGCCTGCGCGTG menD 2411102 - 2409432 - | bifunctional 2-oxoglutarate decarboxylase and SHCHC synthase TERM 3312 2410462 - 2410472 + g 71 -3.2 -4.81249 | TGTCGCCAGAAGAAC CAGT CAC GCTG TTTTTCACTTTCCCG menF 2412486 - 2411191 - | isochorismate synthase 2 TERM 3313 2411724 - 2411742 + g 79 -10.2 -3.85698 | CTACCGTTCCCGCCA GCGCTTCG GTA CGCAGCGC TTTGTCACGCCGCCG elaB 2412870 - 2412565 - | hypothetical protein elaA 2413386 - 2412925 - | putative acyltransferase with acyl-CoA N-acyltransferase domain elaC 2413451 - 2414368 + | binuclear zinc phosphodiesterase TERM 3314 2414436 - 2414478 + T 72 -10.1 -2.85182 | gap 1, overlap 2414435 TTTGACATTTTTTCA TCTGTTTGCCGGATA-CG TTTGATGT CGATATCAGGCAAACAGA ATTATCATTTTTAGT yfbK 2416231 - 2414489 - | hypothetical protein TERM 3315 2416199 - 2416217 + g 82 -3.2 -5.28942 | CAAAATCAAACTACT TATAAGCA ACA TGATTATA TTTTTATTTCGCATA yfbL 2416369 - 2417340 + | putative membrane-associated peptidase yfbM 2417443 - 2417946 + | hypothetical protein TERM 3316 2417969 - 2417989 + T 72 -8.2 -3.97368 | opp_overlap 2417970, overlap 2417970 AGGGCACCAAAAAAA ACCGCCGA ACATG TCGGCGGC TTTCTGACTTACAAA TERM 3317 2417988 - 2417970 - T 100 -11.7 -5.86061 | opp_overlap 2417970 2417969 GGGCACCAAAAAAAA CCGCCGA ACATG TCGGCGG CTTTCTGACTTACAA TERM 3318 2417970 - 2417988 + T 80 -11.7 -2.981 | opp_overlap 2417970, overlap 2417969 GGGCACCAAAAAAAA CCGCCGA ACATG TCGGCGG CTTTCTGACTTACAA nuoN 2419290 - 2418013 - | NADH:ubiquinone oxidoreductase, membrane subunit N TERM 3319 2418652 - 2418640 - G 73 -9.1 -3.67296 | GATGATGGAGGCAAA GGCGA TAA TCGCC AGCACTACGCGAATC nuoM 2421006 - 2419477 - | NADH:ubiquinone oxidoreductase, membrane subunit M TERM 3320 2420798 - 2420786 - G 75 -6.9 -4.41956 | ATAGAGATACCAAAA CGCGG GAT CCACG GCATGTCGAATTCAG TERM 3321 2421090 - 2421132 + r 79 -9.2 -3.88232 | gap 1, overlap 2421091 TCTCTTCGGACTGGG GGTAGTGTCGGATGCGCCG CGAAGA CGGCTTATCCGAC-CTACG TTCTTATATGCCCAG TERM 3322 2421091 - 2421131 + r 82 -12.7 -2.92618 | gap 1, overlap 2421090 CTCTTCGGACTGGGG GTAGTGTCGGATGCGCCG CGAAGA CGGCTTATCCGAC-CTAC GTTCTTATATGCCCA nuoL 2423011 - 2421170 - | NADH:ubiquinone oxidoreductase, membrane subunit L TERM 3323 2421666 - 2421684 + g 72 -4.6 -4.68601 | overlap 2421664 CTGTGAGTTACCCCT TTCACG GCGTGAG CGTGAA TTTGTTCTTTTCCGT nuoK 2423310 - 2423008 - | NADH:ubiquinone oxidoreductase, membrane subunit K nuoJ 2423861 - 2423307 - | NADH:ubiquinone oxidoreductase, membrane subunit J nuoI 2424415 - 2423873 - | NADH:ubiquinone oxidoreductase, chain I nuoH 2425407 - 2424430 - | NADH:ubiquinone oxidoreductase, membrane subunit H TERM 3324 2424800 - 2424776 - G 77 -12.1 -2.71712 | overlap 2424775 TCCGGCTGGTCAAAC GGGTGACGGTG ACA CACCGCCACGC CCGCGATGGCAAAGG TERM 3325 2425250 - 2425230 - G 90 -14.7 -2.71364 | TCATGTCCGCAACCA GCTGGAGCG AAC CGCCCCAGC CAACACGGTTAGGTC nuoG 2428136 - 2425404 - | NADH:ubiquinone oxidoreductase, chain G TERM 3326 2427367 - 2427378 + g 70 -5.8 -4.18018 | TAGTGGTTTACCGTA CCGT TGTA ACGG TTTTCGATACGACGC TERM 3327 2428022 - 2428003 - G 73 -11.4 -2.71144 | CACTGGCGGCAAGCA CCGACGCT TCCC AGCGCCGG ATGCCAGCAAAAGTA nuoF 2429520 - 2428183 - | NADH:ubiquinone oxidoreductase, chain F TERM 3328 2428642 - 2428656 + g 88 -11.4 -3.84451 | GTCAGTCCCCGCGCC GCCTGG CTG CCAGGC TTTGAATTTCAGACC TERM 3329 2429443 - 2429457 + g 81 -10 -3.96148 | overlap 2429442 GCTGCGATATTCGTC CAGCCA CAC TGGCTG TTTGTCATCGCGCAG nuoE 2430017 - 2429517 - | NADH:ubiquinone oxidoreductase, chain E nuoC 2431822 - 2430020 - | NADH:ubiquinone oxidoreductase, chain C,D TERM 3330 2431542 - 2431531 - G 72 -5.8 -4.41548 | opp_overlap 2431540, overlap 2431539 2431540 TCAGATGGTAGAAAA CGGA AAAA TCCG CGGCAGGTAACCCTT TERM 3331 2431563 - 2431539 - G 74 -3.3 -4.89729 | opp_overlap 2431540, overlap 2431531 2431540 TAGAAAACGGAAAAA TCCGCGGCAGG TAA CCCTTCGCGGT GTGTGCGCAGACGTT nuoB 2432578 - 2431916 - | NADH:ubiquinone oxidoreductase, chain B nuoA 2433037 - 2432594 - | NADH:ubiquinone oxidoreductase, membrane subunit A TERM 3332 2432739 - 2432725 - G 100 -2.8 -5.71295 | ACACAAAAATAAAAA TTGCAG CTT CCACAA AGCCTACCCAGCCGC TERM 3333 2433589 - 2433624 + r 78 -6.2 -4.67556 | gap 1, opp_overlap 2433574 2433592 2433593, overlap 2433593 GCTTTTTACTAAAAA AAAGCCGCTGGGGTTTA AAA TAAACC-CAGCGGTTCG TTTTTACACTATTGT TERM 3334 2433621 - 2433592 - R 100 -10.1 -5.86061 | gap 1, opp_overlap 2433589 2433593, overlap 2433574 2433593 TTTTACTAAAAAAAA GCCGCTGGGGTTTA AAA TAAACC-CAGCGGT TCGTTTTTACACTAT TERM 3335 2433593 - 2433620 + r 100 -13.6 -3.81926 | gap 1, opp_overlap 2433593 2433592, overlap 2433589 TTTACTAAAAAAAAG CCGCTGGGGTTTA AAA TAAACC-CAGCGG TTCGTTTTTACACTA TERM 3336 2433620 - 2433593 - R 100 -13.6 -4.10552 | gap 1, opp_overlap 2433589 2433593, overlap 2433592 TTTACTAAAAAAAAG CCGCTGGGGTTTA AAA TAAACC-CAGCGG TTCGTTTTTACACTA lrhA 2434604 - 2433666 - | DNA-binding transcriptional repressor of flagellar, motility and chemotaxis genes TERM 3337 2433887 - 2433913 + g 77 -12.2 -2.78679 | overlap 2433886 GACTCATCATCTCGA CCGGCCTTGCCG TCA CGCCAAGACCGG CTTTCACTGCCGCAC TERM 3338 2434354 - 2434328 - G 72 -11.1 -3.12482 | opp_overlap 2434335, overlap 2434332 GAAGATTACTGAACA TTAATGATGAG CAGGC CTCATCATTAA AACGCAGGATTTTCC TERM 3339 2434374 - 2434357 - G 72 -6.3 -4.30576 | gap 1, overlap 2434359 GCCTCATCATTAAAA CG-CAGGA TTT TCCTGGCG TAACCAAGAAGTTGA TERM 3340 2435529 - 2435513 - H 74 -2.1 -5.30189 | GATAACAGCAAAAAA GGTCAAG ATT CATGTCC CCCATTGAAAAATCC yfbQ 2435524 - 2436741 + | putative aminotransferase TERM 3341 2436751 - 2436777 + F 100 -13.8 -3.28791 | CTGTAATCTTAATTT CACTGCCGGA GATTGCA TCCGGCAGTG TTATCCCGCCACAAT TERM 3342 2437130 - 2437120 - g 77 -3.2 -5.09225 | opp_overlap 2437120 AGGCTATTGAAAAAA TCGC TCA GCAA AAACTGGTCGATATG TERM 3343 2437333 - 2437306 - g 70 -4.8 -4.56597 | gap 1, overlap 2437308 2437321 TCTTGCTGGCAAAAA CGCGACTGGAAGC GAC GCTTGAAG-CGCG CCGCAGCCAGGAGAT TERM 3344 2437353 - 2437367 + G 72 -7.2 -4.1673 | AGCCAGGAGATGGAC TACTTC ATG GAAGTA TTTGTTCCCAGCTTC yfbR 2436825 - 2437424 + | deoxyribonucleoside 5'-monophosphatase TERM 3345 2437432 - 2437479 + T 90 -12.8 -3.28712 | gap 1, opp_overlap 2437457 CGCTGTAAGCAGTCG GAGTCTG-CGTCGCATCAGGC AATAAGC GCCGGATGCGACATCAGGCTC TTGTCAAAACGGAAA yfbS 2439315 - 2437483 - | putative transporter TERM 3346 2439382 - 2439365 - R 100 -9.8 -5.24129 | TTCTGCCATAAAAAA GCCCCG ACGAGA CGGGGC TAAATCATGATCAGG yfbT 2440052 - 2439402 - | putative phosphatase TERM 3347 2439678 - 2439697 + g 72 -6.4 -4.3739 | gap 1, opp_overlap 2439672, overlap 2439682 GGTTACAAACACCTC TGGCGCGGG AAG CCC-CGCTA TTTTATGACGCGCTC TERM 3348 2439682 - 2439695 + g 76 -9.5 -3.79419 | overlap 2439678 ACAAACACCTCTGGC GCGGG AAGC CCCGC TATTTTATGACGCGC yfbU 2440557 - 2440063 - | hypothetical protein TERM 3349 2440614 - 2440596 - R 100 -6 -5.76949 | opp_overlap 2440596 TACGGTGAAAAAAAA GAAGGC TGAGTAT GCCTTC TTTTATATGCGTAAT TERM 3350 2440596 - 2440614 + r 76 -6 -4.55689 | opp_overlap 2440596 TACGGTGAAAAAAAA GAAGGC TGAGTAT GCCTTC TTTTATATGCGTAAT yfbV 2441095 - 2440640 - | conserved hypothetical protein; putative inner membrane protein ackA 2441433 - 2442635 + | acetate kinase A and propionate kinase 2 TERM 3351 2442639 - 2442666 + F 100 -16.4 -4.36914 | gap 1, overlap 2442641 CTGACTGCCTGATTT CA-CACCGCCAGC TCA GCTGGCGGTGCTG TTTTGTAACCCGCCA TERM 3352 2442641 - 2442663 + F 100 -19.2 -2.8733 | overlap 2442639 GACTGCCTGATTTCA CACCGCCAGC TCA GCTGGCGGTG CTGTTTTGTAACCCG TERM 3353 2443217 - 2443201 - g 74 -2.9 -5.00616 | CGGCGGTGCAAAAAA CACCAAT ATT ACCGGCG TTATCGTTAACAAAC TERM 3354 2443681 - 2443696 + G 78 -9 -3.96148 | CGAACGTGCTTTCGC TACCGG CCTG CCGGTA TTTATGGTGAACACC pta 2442710 - 2444854 + | phosphate acetyltransferase TERM 3355 2444866 - 2444886 + F 82 -12.6 -2.87132 | GTAATCTCGTCATCA TCCGCAGC TTTGC GCTGCGGA TATCTGAACCGGAAA TERM 3356 2444895 - 2444917 + F 100 -15 -5.64304 | CTGCGGATATCTGAA CCGGAAATAG TCA CTATTTCCGG TTTTTTATTCTATTA yfcC 2445044 - 2446564 + | conserved hypothetical protein; putative inner membrane protein TERM 3357 2446574 - 2446591 + T 100 -12.7 -5.32944 | opp_overlap 2446569 2446576 CACTAAAAATGTTAA GAGCCGC GATT GCGGCTC TTTTTTCATTCTGCC TERM 3358 2446589 - 2446576 - T 72 -9.5 -3.17553 | opp_overlap 2446574, overlap 2446569 CTAAAAATGTTAAGA GCCGC GATT GCGGC TCTTTTTTCATTCTG yfcD 2447139 - 2446597 - | putative NUDIX hydrolase TERM 3359 2446685 - 2446703 + g 82 -9.6 -4.16016 | opp_overlap 2446684 GAGTCTGGAGTGAAC TCATCGCA GCG TGCGGTGA TTTCTTCCGGCGTCA yfcE 2447751 - 2447197 - | putative phosphatase yfcF 2448448 - 2447804 - | putative enzyme TERM 3360 2448140 - 2448155 + g 86 -9 -4.42386 | CCAGGCCTGAATCTG TCGTGC TCGC GCACGA TTTTCTAAATCAAGC TERM 3361 2448424 - 2448411 - G 79 -2.3 -5.27923 | TAAGGGGAGAAAAAA TGGGC ATCT GACCA AAGCGTGATAGCGGG yfcG 2448584 - 2449231 + | putative S-transferase folX 2449288 - 2449650 + | D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase and dihydroneopterin aldolase TERM 3362 2450128 - 2450088 - g 78 -9 -3.93583 | gap 1, overlap 2450073 GAATTTACCCATAAA CTCTGCGCCC-GCTGGGAA GAAA TTGCCTGCCGGGCACAAAG TGACAAAACGCGAGT yfcH 2449671 - 2450564 + | conserved hypothetical protein; putative NAD(P)-binding Rossmann-fold domain yfcI 2451502 - 2450612 - | putative transposase TERM 3363 2450840 - 2450822 - G 70 -5.9 -4.25056 | opp_overlap 2450835 TATCTCACCAATAAA TGCACGG AAACG CCGGGCA TCCCCCGTTTGTAAT TERM 3364 2451478 - 2451466 - G 71 -9.1 -3.51168 | overlap 2451464 AAAAAGATTTAAATA CCGCA TCA TGCGG CGTGGAAGTTGTCGA TERM 3365 2451691 - 2451668 - R 71 -8.8 -3.45027 | overlap 2451666 ATTCCCCATGAAATA CTCCGGCAGC GTTA ACCACCGGAG AGGAAATTATTTCAG hisP 2452471 - 2451698 - | histidine/lysine/arginine/ornithine transporter subunit ; ATP-binding component of ABC superfamily TERM 3366 2452504 - 2452517 + r 71 -4.5 -4.64766 | opp_overlap 2452495, overlap 2452505 GAAGAAGGTTTCACA TGCTG CAAC CAGCG TTTTTCAGCTCTACG hisM 2453195 - 2452479 - | histidine/lysine/arginine/ornithine transporter subunit ; membrane component of ABC superfamily TERM 3367 2453126 - 2453108 - G 70 -5.2 -4.33182 | overlap 2453119 CTACCGACAAAATAA GCAGCCAC AGA GTGATTGC CACGCCAGTAAAGCG hisQ 2453878 - 2453192 - | histidine/lysine/arginine/ornithine transporter subunit ; membrane component of ABC superfamily hisJ 2454750 - 2453968 - | histidine/lysine/arginine/ornithine transporter subunit ; periplasmic-binding component of ABC superfamily TERM 3368 2454610 - 2454622 + g 93 -6.3 -5.27477 | opp_overlap 2454609 ATCGAAGCCAACCAG TTCAC CTT GTGAA TTTTTTGATTCAAAT argT 2455753 - 2454971 - | lysine/arginine/ornithine transporter subunit ; periplasmic-binding component of ABC superfamily TERM 3369 2455097 - 2455120 + g 100 -5.2 -5.56264 | ATCTTTACGCAGCCC TACACCGGTG CCGT CACCGAAGTA TTTTTTGTCTTTCAC TERM 3370 2456010 - 2455992 - R 100 -13.2 -4.07687 | overlap 2456003 ATCGCGGTTGCAAAA TTGCCCTG AAA CAGGGCAA CAGCGGAGTTATGCG ubiX 2456588 - 2456019 - | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase TERM 3371 2456670 - 2456652 - R 81 -12.4 -2.53263 | GGGAGTTGCAAGTCA GGGTGCCA GAC CGGCACCC TGAGCGAAGGCATCA purF 2458200 - 2456683 - | amidophosphoribosyltransferase TERM 3372 2457102 - 2457115 + g 73 -3.7 -4.82901 | GGACGATAGAGTCGT CGACC AGCA GGACG TTTTTATCGCGGAAC TERM 3373 2457971 - 2457937 - G 72 -7.2 -4.28774 | gap 2 GGAGTTAACGTAAAA CGGCTG-C-GCTTCAG AGGCG CTGGAGCTGCCAGCCG TGGGGTAACGCACAT cvpA 2458725 - 2458237 - | membrane protein required for colicin V production TERM 3374 2458853 - 2458828 - R 93 -9.8 -5.1356 | GCGCATCAATAAAAA TGGCGCTGAA AAAATA TTCAACGCCA TCGACTTTTTATGCC TERM 3375 2458975 - 2458942 - R 79 -11.7 -2.78384 | opp_overlap 2458955, overlap 2458952 2458955 TTCTGCTCCAGCACA GGCCTGATAAGACGC GCTG GCGTCACATCAGGCA ACGGCTGTCGGATGC dedD 2459919 - 2459257 - | hypothetical protein folC 2461177 - 2459909 - | bifunctional folylpolyglutamate synthase and dihydrofolate synthase TERM 3376 2460576 - 2460589 + g 70 -3.7 -4.65895 | GGCATCTCCGGCTCA CCGAC AATT GCCGG TTTTTCGCTGCGAAA TERM 3377 2461153 - 2461129 - G 86 -9.1 -4.38927 | TTTCCAGATAAGAAA GCCACGAAGCC AGA GGCGACGCGGC TTGAGGAGTGCGTTT TERM 3378 2461214 - 2461236 + r 100 -14.8 -3.45054 | opp_overlap 2461214 GTGAGAATAGCAAAA GGGCAGAGCC AGT GGCCCTGCCC TTATCAGTTATCAGG TERM 3379 2461236 - 2461214 - R 100 -17 -4.46656 | opp_overlap 2461214 GTGAGAATAGCAAAA GGGCAGAGCC AGT GGCCCTGCCC TTATCAGTTATCAGG accD 2462161 - 2461247 - | acetyl-CoA carboxylase, beta (carboxyltranferase) subunit TERM 3380 2462305 - 2462293 - R 77 -3.3 -5.24531 | ACTTTGGATAAAAAA GTGGT CGA ACCGC AGAGTTACTTTTTAT dedA 2462976 - 2462317 - | conserved hypothetical protein; putative inner membrane protein TERM 3381 2463004 - 2463038 + r 76 -10.8 -3.03338 | overlap 2462993 CTTGTACTCGTCATC TATCAGGCTGTAACTA CGT TGGCTACAGCCTGAAA TGTTCCGAGCATTAT truA 2463871 - 2463059 - | pseudouridylate synthase I TERM 3382 2463620 - 2463651 + g 100 -13.6 -3.57144 | CGCATTTACGCCTAA CGTCCACGCAGCGT CTTT GCGCTGCGCGGTCG TTTCGAAATGCACCA usg 2464884 - 2463871 - | putative semialdehyde dehydrogenase TERM 3383 2464691 - 2464675 - G 88 -5.7 -5.24129 | GCCTGCGACAAAAAA CGCCAGC TGC GCCTGCG TCCAGTCGAATTCAG TERM 3384 2464937 - 2464910 - R 74 -7.7 -4.04579 | TCCAGAAATAGCAAA GCTCCCTGCCA ATGTTA CAGCAGAGAGC ATGAAGAAGAGATTA pdxB 2466086 - 2464950 - | erythronate-4-phosphate dehydrogenase TERM 3385 2467041 - 2467077 + G 70 -6.6 -4.08945 | gap 1, opp_overlap 2467041 AACGGCGGGTTAAAG GGATTGAGCCGCGTGAT ATGC AAC-CGCTGCTTAATCC TTTTCCACCGATGAT flk 2466185 - 2467180 + | flagella control of anti-sigma factor FlgM secretion into the periplasm yfcJ 2468355 - 2467177 - | putative transporter; UPF0226 family TERM 3386 2468302 - 2468286 - G 78 -5.1 -4.85599 | TGTAGGTGAGAAAAA CCGCA AAAGCGA TGCGG AAGAGCGAAAAATTG TERM 3387 2468517 - 2468546 + r 100 -13.7 -3.72576 | opp_overlap 2468523, overlap 2468523 GATTGTCAATGATGT GAAAAAGGGAACC ATAG GGTTCCCTTATTC TTTAGTACCGGAGGC TERM 3388 2468523 - 2468540 + r 91 -11.3 -4.12603 | opp_overlap 2468523, overlap 2468517 CAATGATGTGAAAAA GGGAACC ATAG GGTTCCC TTATTCTTTAGTACC TERM 3389 2468540 - 2468523 - R 100 -11.3 -4.64598 | opp_overlap 2468517 2468523 CAATGATGTGAAAAA GGGAACC ATAG GGTTCCC TTATTCTTTAGTACC fabB 2469840 - 2468620 - | 3-oxoacyl-[acyl-carrier-protein] synthase I TERM 3390 2469904 - 2469889 - H 71 -9 -3.281 | overlap 2469887 TTCGAATGCACAATA GCGTAC ACTT GTACGC CGAACAAGTCCGATC trmC 2469999 - 2472005 + | fused 5-methylaminomethyl-2-thiouridine-forming enzyme methyltransferase ; FAD-dependent demodification enzyme TERM 3391 2472083 - 2472041 - T 88 -12 -3.53811 | opp_overlap 2472033, overlap 2472080 CGGATGCGGCGTAAA CGCCTTATCCGACCTACGCG TTA CCTGTAGGCCTGATAAGACG CGATAAGCGTCGCAT yfcL 2472404 - 2472126 - | hypothetical protein yfcM 2472986 - 2472438 - | hypothetical protein yfcA 2473795 - 2472986 - | conserved hypothetical protein; putative inner membrane protein mepA 2474619 - 2473795 - | murein DD-endopeptidase TERM 3392 2474525 - 2474540 + g 72 -4.6 -4.61482 | ATCGATTGTGCGCTA CCCGGC ACAG GTTGGG TTATTTTTTGCCACG TERM 3393 2474565 - 2474609 + g 80 -5.5 -4.95211 | GCCACGGCGTCGCTG CCAGGCTGGCGCTACTGGC AAGCAGA GCCAGCAGCGCAATCGCGG TTTTGTTCATTTTTT aroC 2475708 - 2474623 - | chorismate synthase TERM 3394 2474720 - 2474694 - G 70 -5.9 -4.2828 | gap 1 GGTGATCCATTAAAA CGATCGCCAGCA TCGC TTCTG-CGATCG GCACCGCGCGGATCC TERM 3395 2475082 - 2475114 + g 71 -2 -5.00616 | overlap 2475070 2475085 TACGCCACTGGCAAC GACGGTGACTTT CGCACCAAT AGAGTCGCCTTC TTTTTTCAGCGCGCG TERM 3396 2475265 - 2475279 + g 85 -2.8 -5.44119 | opp_overlap 2475265, overlap 2475267 AATCTCAATGCCAAA TTTCTC GGC GAGATA TTTTTTTGCAATCGC TERM 3397 2475267 - 2475277 + g 70 -5.4 -4.36089 | opp_overlap 2475265, overlap 2475265 TCTCAATGCCAAATT TCTC GGC GAGA TATTTTTTTGCAATC prmB 2476675 - 2475743 - | N5-glutamine methyltransferase yfcN 2476841 - 2477392 + | hypothetical protein TERM 3398 2477702 - 2477671 - T 100 -14.4 -3.54951 | opp_overlap 2477675 2477678, overlap 2477675 GACCGCATGACATAA CGGACAACGGGGCC AGAT GGCCCCGTTGTGTG GTGTATACGCTACAG TERM 3399 2477675 - 2477698 + T 100 -18.2 -2.89177 | opp_overlap 2477671 2477675, overlap 2477678 GCATGACATAACGGA CAACGGGGCC AGAT GGCCCCGTTG TGTGGTGTATACGCT TERM 3400 2477698 - 2477675 - T 100 -18.2 -2.64051 | opp_overlap 2477675 2477678, overlap 2477671 GCATGACATAACGGA CAACGGGGCC AGAT GGCCCCGTTG TGTGGTGTATACGCT TERM 3401 2477678 - 2477695 + T 100 -14.1 -3.59109 | opp_overlap 2477675 2477671, overlap 2477675 TGACATAACGGACAA CGGGGCC AGAT GGCCCCG TTGTGTGGTGTATAC ECS88_2480 2478569 - 2477712 - | conserved hypothetical protein; putative exported protein TERM 3402 2477945 - 2477971 + g 74 -6.5 -4.44915 | CGTCACAGAGCTTGC CGCTTTCCATC AAGAA GGTGGGCAGCG TTTTCTCAATCGTTC yfcP 2479083 - 2478556 - | putative exported fimbrial-like adhesin protein TERM 3403 2478708 - 2478722 + g 91 -7.8 -5.08824 | TATTGTTAATCGGCA CCGGTG TTC CATCGG TTTTTTCCATGCCAA yfcQ 2479559 - 2479080 - | putative fimbrial-like adhesin exported protein yfcR 2480125 - 2479556 - | putative fimbrial-like adhesin exported protein yfcS 2480969 - 2480076 - | putative periplasmic pilus exported chaperone yfcU 2483502 - 2480848 - | putative export usher protein ECS88_2486 2484119 - 2483370 - | putative fimbrial-like adhesin protein TERM 3404 2483841 - 2483853 + gr 72 -5.5 -4.47183 | GTTAGTGCCGGTGAA CGTGG TCT CCATG TTTGTTTCAGTGGTA TERM 3405 2484677 - 2484647 - R 82 -10.5 -3.93695 | gap 1, opp_overlap 2484648, overlap 2484648 TGTATGACGGAGAAA CTGCCCGGTGTACG CGCA CGTA-ACCGGGCAT TGATTGCTTAAATTG TERM 3406 2484676 - 2484648 - R 87 -14 -2.95896 | gap 1, opp_overlap 2484648, overlap 2484647 GTATGACGGAGAAAC TGCCCGGTGTACG CGCA CGTA-ACCGGGCA TTGATTGCTTAAATT TERM 3407 2484648 - 2484676 + r 100 -14 -3.46482 | gap 1, opp_overlap 2484648 2484647 GTATGACGGAGAAAC TGCCCGGTGTACG CGCA CGTA-ACCGGGCA TTGATTGCTTAAATT sixA 2485170 - 2484685 - | phosphohistidine phosphatase yfcX 2487517 - 2485373 - | fused enoyl-CoA hydratase and epimerase and isomerase ; 3-hydroxyacyl-CoA dehydrogenase TERM 3408 2485720 - 2485732 + g 88 -2.6 -5.46698 | TGAGCGGGTAAATGG CGGG ATCGA CCTG TTTTTTGCTTTTACA yfcY 2488827 - 2487517 - | beta-ketoacyl-CoA thiolase, anaerobic, subunit TERM 3409 2488990 - 2488964 - R 100 -20.2 -5.26907 | opp_overlap 2488964 GAAGAGAAAAGAAAA CGCCCCTGCCAG CAA CTGACAGGGGCG TATGTACCCGAGAGG TERM 3410 2488964 - 2488990 + r 100 -18 -2.87132 | opp_overlap 2488964 GAAGAGAAAAGAAAA CGCCCCTGCCAG CAA CTGACAGGGGCG TATGTACCCGAGAGG yfcZ 2489292 - 2489008 - | hypothetical protein fadL 2489658 - 2491004 + | long-chain fatty acid outer membrane transporter TERM 3411 2491031 - 2491050 + T 100 -8.6 -5.82036 | opp_overlap 2491031 CTTAATAAGAAAAAA GGTGAGTT TTGC GACTCACC TTTTTTGTTTCTTAT TERM 3412 2491050 - 2491031 - T 100 -7.9 -5.64873 | opp_overlap 2491031 CTTAATAAGAAAAAA GGTGAGT TTTGCG ACTCACC TTTTTTGTTTCTTAT vacJ 2491817 - 2491062 - | putative lipoprotein ECS88_2493 2492013 - 2491843 - | hypothetical protein TERM 3413 2492511 - 2492492 - g 70 -4.2 -4.65895 | opp_overlap 2492492 CCCGTCATGCAAAAA CCGACAAT GAGC AACGTCGG CTTACTTATGCGGTT yfdC 2492111 - 2493043 + | conserved hypothetical protein; putative inner membrane protein TERM 3414 2493051 - 2493034 - f 74 -3.3 -5.1286 | GAAAAATGATAAAAA CCCGGCA TAAA TGGCGAG GGTTTAAGCAGTCGA TERM 3415 2493341 - 2493319 - f 91 -10 -4.60487 | CATGACGGGTAAAAA GTGGATAAAA TAA TTTTACCCAC CGGATTTTTACCCAT intS 2493355 - 2494512 + | putative prophage CPS-53 integrase; CPS-53 (KpLE1) prophage TERM 3416 2494664 - 2494683 + T 100 -9.2 -5.3236 | ATTACCGCGGTTAAT GCCCGTCG CTTC CAACGGGC TTTTTTGTAAATTAT TERM 3417 2495717 - 2495730 + T 74 -3.1 -5.04385 | TTTTATATTTAATTT CGTTG ACGT CAATG TTTTTTGCCAATGTA ECS88_2497 2498739 - 2495794 - | Endo-alpha-sialidase, phage head protein TERM 3418 2497488 - 2497478 - G 70 -5.4 -4.43307 | CCGTCAACAAAAGAA GGAA TAG TTCC AAGACTGGTTTTTCT TERM 3419 2497791 - 2497803 + g 78 -7.7 -4.44046 | opp_overlap 2497790 GGCGATCCCACAACT CTGCA ACC TGCAG TTTATTTCCGCTCAC TERM 3420 2498786 - 2498764 - R 70 -7.6 -3.98913 | opp_overlap 2498764 TCCAGATGCAAAGAA TCGCCGCAGC ATG GCCACGGTGA ATTTTGGGCATAAAA TERM 3421 2498820 - 2498805 - R 100 -10.4 -5.60993 | opp_overlap 2498805 2498802 TTGGGCATAAAAAAA CCCAGC CGAA GCTGGG TCGTTGCGTTGGTTA TERM 3422 2498805 - 2498820 + r 71 -10.4 -2.80398 | opp_overlap 2498805, overlap 2498802 TTGGGCATAAAAAAA CCCAGC CGAA GCTGGG TCGTTGCGTTGGTTA ECS88_2498 2499808 - 2498840 - | Antirepressor protein ant TERM 3423 2499337 - 2499348 + g 72 -4.4 -4.68384 | overlap 2499333 GAAGCGGAGTCCTGT CATC AACA GATG TTTTCTTCCGTGCAT TERM 3424 2499771 - 2499810 + g 70 -4.2 -4.72863 | opp_overlap 2499773 2499774 2499778, overlap 2499773 2499774 2499778 CACGGATTTACCGAC AACCGAAGCCCTGACTGT TCCA GCAGTTGGGGCTTCACTG TTTTGATTTCTTTGC TERM 3425 2499778 - 2499803 + g 72 -9.7 -3.30459 | opp_overlap 2499778 2499774 2499773, overlap 2499774 2499773 2499771 TTACCGACAACCGAA GCCCTGACTGT TCCA GCAGTTGGGGC TTCACTGTTTTGATT ECS88_2500 2500200 - 2500490 + | putative phage regulatory protein ECS88_2501 2500490 - 2501026 + | putative Clp protease TERM 3426 2501073 - 2501058 - T 100 -10.4 -5.24531 | opp_overlap 2501058 ACTCCTTATAAAAAA CCCACC TGAC GGTGGG TTTAGTCAAACATAG TERM 3427 2501058 - 2501073 + T 80 -10.4 -3.73224 | opp_overlap 2501058 ACTCCTTATAAAAAA CCCACC TGAC GGTGGG TTTAGTCAAACATAG ECS88_2503 2501524 - 2501075 - | hypothetical protein TERM 3428 2501409 - 2501439 + g 100 -12.8 -4.68908 | overlap 2501411 GGCAACGTTCCCGTA GACTTGTAGATGAT AAA ATCATCTACAAGTG TTTGTTTTAAATCAG TERM 3429 2501411 - 2501437 + g 100 -15.4 -3.95475 | overlap 2501409 CAACGTTCCCGTAGA CTTGTAGATGAT AAA ATCATCTACAAG TGTTTGTTTTAAATC TERM 3430 2501495 - 2501484 - G 82 -3 -5.24531 | ACCGGGGAGAAAAAA TAGT CAAA ACTA TCCTGATTATATTCC ECS88_2504 2502129 - 2501533 - | hypothetical protein ECS88_2505 2502275 - 2502625 + | hypothetical protein; putative membrane protein ECS88_2506 2504658 - 2502643 - | putative DNA transfer protein from bacteriophage TERM 3431 2502865 - 2502829 - G 77 -6.6 -4.49316 | gap 1, opp_overlap 2502829, overlap 2502825 AGCAGGAACAACAAA CGCAGCCGTTTTTAGCA TCCC CGCTAATA-CTGCTGCG TTTATGATGCCACCA ECS88_2507 2506106 - 2504655 - | DNA transfer protein ECS88_2508 2506809 - 2506117 - | DNA transfer protein TERM 3432 2506515 - 2506527 + g 72 -7.7 -3.99324 | TCTGATAGCGAGCCT GACCT GCA AGGTC TTTATACTGCTGAGA ECS88_2509 2507267 - 2506812 - | Head assembly protein ECS88_2510 2508070 - 2507267 - | Packaged DNA stabilization protein from phage ECS88_2511 2509386 - 2507968 - | Packaged DNA stabilization protein from phage TERM 3433 2509118 - 2509136 + gr 80 -8.8 -4.17701 | ACGCGACCACTTCCG GCGACGTC ACC GACTTCGC TTTCTCCTTTGTACA ECS88_2512 2509857 - 2509396 - | Putative DNA stabilization protein from phage TERM 3434 2509660 - 2509672 + g 91 -9.1 -4.60797 | opp_overlap 2509660 ATCATCGTCAGGTAA CGGCA TGA TGCCG TTTTCTGTATCAGCA ECS88_2513 2510065 - 2509838 - | hypothetical protein TERM 3435 2510061 - 2510046 - G 100 -10.4 -5.06414 | TTCTCCCAATAAAAA TGGGGC CGAA GCCCCA CCAAAATTACTGCCC ECS88_2514 2511321 - 2510068 - | Putative Coat protein from phage ECS88_2515 2512233 - 2511340 - | putative bacteriophage protein ECS88_2517 2514522 - 2512324 - | putative Bacteriophage portal protein TERM 3436 2513062 - 2513043 - G 81 -12.2 -3.14132 | TGCCGTCCTCATTAA CGATACGC ATCG GCGTATCG CTGCCATAGACTTCA TERM 3437 2513373 - 2513383 + g 74 -2.4 -5.08601 | overlap 2513365 TGACCATCGGCAGGA ACGC CGG GCGC TTTTTGTTGCGCTCC TERM 3438 2514492 - 2514508 + g 93 -2.2 -5.626 | opp_overlap 2514476 TGCACAGCACCTTGC GATGCC AGTCA GTCATC TTTTTTTCTGCCATA ECS88_2518 2515939 - 2514524 - | Terminase large subunit ECS88_2519 2516376 - 2515936 - | hypothetical protein ECS88_2520 2516621 - 2516379 - | hypothetical protein TERM 3439 2516722 - 2516682 - R 76 -10.5 -3.32844 | opp_overlap 2516695 CCGTGTAGGGTATAA GCCATTGTCGAGACCACTC ATT GAATGGTCTCTGCAATAAC CGATGTCTTTCCATC ECS88_2521 2517460 - 2516849 - | hypothetical protein TERM 3440 2517202 - 2517215 + g 70 -6.7 -4.04206 | opp_overlap 2517202 TGTTTTTATAGCAAA GCTCA AAGT TGAGC TTTGTATCAAACTCA TERM 3441 2517562 - 2517545 - R 100 -10.5 -5.4251 | TGCAGATATAAAAAA GCCCCGC GAAT GCGAGGC TAAATCCTGGTATTT ECS88_2522 2517749 - 2517597 - | putative bacteriophage protein (Gene 65) ECS88_2523 2518174 - 2517737 - | bacteriophage lysis protein r 2518647 - 2518171 - | Lysozyme (Muramidase) (Endolysin) ECS88_2525 2518954 - 2518631 - | lysis protein S and lysis inhibitor (holin protein) TERM 3442 2519110 - 2519079 - R 100 -15.3 -4.11692 | opp_overlap 2519053, overlap 2519080 TATGCACGGGCAAAA CGGCATGAGGTTG TTAGCG CAACCTCATGCCA CCCGCTTTCACGAAG TERM 3443 2519109 - 2519080 - R 100 -16.6 -3.06694 | opp_overlap 2519053, overlap 2519079 ATGCACGGGCAAAAC GGCATGAGGTTG TTAGCG CAACCTCATGCC ACCCGCTTTCACGAA TERM 3444 2519533 - 2519499 - R 100 -6.5 -5.63517 | gap 1, overlap 2519528 TGTGCAAACAAAAAA GCCACCGTT-GCAACT TAAG AGTCACTAACGGCAGC TTACCTTCTAATTAT ECS88_2526 2520069 - 2519551 - | putative phage antitermination protein Q ECS88_2527 2520254 - 2520066 - | conserved hypothetical protein ninH rusA 2520613 - 2520251 - | crossover junction endodeoxyribonuclease ECS88_2529 2520900 - 2520610 - | hypothetical protein roi 2521622 - 2520900 - | DNA-binding protein from phage origin TERM 3445 2521233 - 2521255 + g 70 -4.9 -4.46212 | gap 1, opp_overlap 2521233, overlap 2521239 TTTAGGTGCGACAAT TGCGAGCTGG TTTT CCAG-TTGCA TTTTCTGCTCAGCAA ninF 2521791 - 2521615 - | conserved hypothetical protein from phage origin ECS88_2532 2522245 - 2521784 - | conserved hypothetical protein ninX ECS88_2533 2522789 - 2522379 - | putative ninB protein ECS88_2534 2523303 - 2522989 - | hypothetical protein ECS88_2535 2523625 - 2523419 - | conserved hypothetical protein; putative exported protein TERM 3446 2523671 - 2523650 - R 95 -8.7 -5.27335 | gap 1, opp_overlap 2523650 TCCCCCAAATAAAAA GGCCTGC-GA TTA CCAGCAGGCC TGTTACAAGCTCAGT ECS88_2536 2523840 - 2523682 - | hypothetical protein ECS88_2537 2525074 - 2523698 - | Replicative DNA helicase ECS88_2538 2526018 - 2525071 - | hypothetical protein ECS88_2539 2526052 - 2525810 - | hypothetical protein ECS88_2540 2526566 - 2526021 - | hypothetical protein cII 2526696 - 2526316 - | Regulatory protein CII TERM 3447 2526344 - 2526363 + g 100 -9.2 -5.5112 | opp_overlap 2526344 TGTATTTGATCAGAA CGCTCGGT TGCC GCCGGGCG TTTTTTATTGGTGAG cro 2526903 - 2526718 - | Regulatory protein cro (Antirepressor) cII 2526984 - 2527634 + | Repressor protein CII TERM 3448 2527636 - 2527649 + F 100 -9.5 -6.4753 | opp_overlap 2527635 2527636 CAAACCTTCCATAAG GGGGC ATTC GCCCC TTTTTTTTTATTTCC N 2528063 - 2528455 + | regulatory protein N TERM 3449 2528745 - 2528727 - g 79 -2.4 -5.243 | overlap 2528719 GAAAGTAGCAAAAAA TGCAGAAA GAT CTTTTGCA TTCCCGACGAAGAAA ECS88_2545 2528464 - 2528934 + | hypothetical protein TERM 3450 2528981 - 2528944 - f 79 -9.9 -3.75738 | TATTAGTACGAATAA GCACTGTGTATTCATTC CAAC GAGTGAATACACGGAGC AATGTCGCTCGTAAC TERM 3451 2529039 - 2529056 + F 100 -8.4 -5.38047 | TTGGAAATCTTCTTT GCCCTC CAGTGT GAGGGC TTTTTTATATGCATA TERM 3452 2529079 - 2529094 + F 77 -6.8 -4.49389 | opp_overlap 2529079 TATGCATACCAATAA CGCTTC ACTC GAGGCG TTTTCGTTATGCAAT ECS88_2546 2529266 - 2529454 + | hypothetical protein ECS88_2547 2529375 - 2529545 + | hypothetical protein erf 2529526 - 2530161 + | DNA single-strand annealing protein; essential recombination function protein Erf TERM 3453 2530401 - 2530388 - gf 70 -5.3 -4.41206 | opp_overlap 2530388 AATTACCGGAGAAAA CATCA GGGT TGATG TTTATCAGGGGCAAA ECS88_2549 2530071 - 2530544 + | hypothetical protein TERM 3454 2530610 - 2530638 + G 72 -11.7 -2.52464 | GACCCGCGCCGCTGT TCCGGCAATTCCG TAT CGGAGGTGCTGGA TAAATTCAGAAAAAA abc 2530568 - 2530864 + | Anti-RecBCD protein 2 ECS88_2551 2530941 - 2531408 + | hypothetical protein ECS88_2552 2531473 - 2531772 + | hypothetical protein ECS88_2553 2531774 - 2532346 + | hypothetical protein ECS88_2554 2532464 - 2532631 + | hypothetical protein ECS88_2555 2532624 - 2532908 + | hypothetical protein TERM 3455 2532912 - 2532929 + F 90 -9.1 -4.83243 | opp_overlap 2532912 GACAATGAATGATAA TCCTCGC ACTC GCGGGGA TTTCTTTTATCTGAA TERM 3456 2532945 - 2532958 + F 83 -5.9 -5.18371 | TTTCTTTTATCTGAA CTCGC TACG GCGGG TTTTGTTTTATGGAG ECS88_2556 2532981 - 2533148 + | hypothetical protein TERM 3457 2533141 - 2533154 + F 100 -9.5 -5.4833 | opp_overlap 2533134 2533140 2533141, overlap 2533140 2533150 TGAAAGAACACCAAG CCGCC TGAT GGCGG TTTTTTATTGCCTGA torI 2533206 - 2533406 + | response regulator inhibitor for tor operon dsdC 2534529 - 2533594 - | DNA-binding transcriptional dual regulator TERM 3458 2534689 - 2534700 + H 86 -2.2 -5.626 | AATTTTATCGTTTGT CAGC CTGC GTTG TTTTTTTGTCCAATA dsdX 2534747 - 2536084 + | putative transporter TERM 3459 2536395 - 2536369 - g 77 -5.8 -4.65895 | overlap 2536389 CCTGCTATGCAAAAA CGGCTGGAAA AGGAATA TCACCAGCCG ATCGCCGGGCAATTG dsdA 2536102 - 2537430 + | D-serine ammonia-lyase emrY 2539076 - 2537538 - | putative multidrug efflux system TERM 3460 2538647 - 2538658 + g 82 -2.2 -5.31877 | TTGACCATAATGCCA GAGC AAAT GTTC TTTTTTCTGGTGGAT emrK 2540239 - 2539076 - | EmrKY-TolC multidrug resistance efflux pump, membrane fusion protein component TERM 3461 2539861 - 2539888 + g 83 -10 -4.1337 | gap 1, opp_overlap 2539861, overlap 2539864 ATTGTTGATACTGAA TAC-GTGCTGAAG CGA CTTCGGCACTGTA TTGTTTATCCTGTAA TERM 3462 2539864 - 2539884 + g 80 -11.9 -3.39301 | opp_overlap 2539861, overlap 2539861 GTTGATACTGAATAC GTGCTGAAG CGA CTTCGGCAC TGTATTGTTTATCCT evgA 2540655 - 2541269 + | DNA-binding response regulator in two-component regulatory system with EvgS TERM 3463 2541573 - 2541548 - g 75 -5.5 -4.60924 | overlap 2541537 TAAATCTTTTAAAAA GAGCGTTAAAT ATCA AATTAACACTC CGGGAATACGCAGAT TERM 3464 2542511 - 2542492 - g 100 -4.3 -5.66989 | opp_overlap 2542492 CAAACATTAAAAAAA GGAATGA AAGTTG CCATTCC ATATTATTATGAGCT TERM 3465 2543294 - 2543311 + G 70 -5.5 -4.42513 | CCTTATGTAATCTGC CAGCAAG CGAA CATGCTG TTTATATTTGTGGTT TERM 3466 2543405 - 2543386 - g 70 -3.6 -4.65722 | gap 1, overlap 2543394 GTAGAGAGAAATAAA GCGATCAAT GCA ACTG-TCGC AAAAAGCCAGTTTCT TERM 3467 2543423 - 2543411 - g 90 -9.1 -4.58283 | CAACTGTCGCAAAAA GCCAG TTT CTGGC AACAATGAGTCACGA evgS 2541274 - 2544867 + | hybrid sensory histidine kinase in two-component regulatory system with EvgA TERM 3468 2544874 - 2544900 + T 80 -10.9 -3.34517 | opp_overlap 2544871 2544872, overlap 2544872 AATGACTAAATAGCG GCTCCCACAAT GTTCA AATGTGGGAGC TATTTACCAGCACAT yfdE 2546068 - 2544923 - | putative acyl-CoA-transferase, NAD(P)-binding TERM 3469 2544996 - 2545011 + g 75 -4.6 -4.87786 | opp_overlap 2544990, overlap 2544967 GGCATAACATGCGGG TCCGCG CAGC CGCTGA TTTTTATCGGATTAC TERM 3470 2546113 - 2546089 - R 81 -6.5 -5.0133 | gap 1, opp_overlap 2546089 2546088 TATGCCTTGAAAAAA GCCGAAG-GT GAAAAG ACACTTCGGC ATTTATGTAAAATCA yfdV 2547086 - 2546142 - | putative transporter oxc 2548850 - 2547156 - | putative oxalyl-CoA decarboxylase TERM 3471 2548672 - 2548657 - G 77 -6.1 -4.63218 | overlap 2548659 TTTTGGGTAAGAAAA CCGCT TGCTGC AGCGG CATAGCCTGCCGACT frc 2550154 - 2548904 - | formyl-CoA transferase, NAD(P)-binding TERM 3472 2550611 - 2550575 - R 93 -11.9 -3.92542 | opp_overlap 2550574 2550573 GCGAGCGCCAAATAA TTTTATGACCACAAC CTGTCGT ATTGTGGTCATAAAA AATTGTCGACTGGAG yfdX 2551301 - 2550666 - | hypothetical protein TERM 3473 2551651 - 2551665 + r 73 -4.3 -4.85822 | GTCTCTATTATGGCA TGCAA TGTTT TTGCA TTTTCTATTTCTGGT TERM 3474 2551731 - 2551718 - R 91 -6.7 -5.46276 | AAGAGACAGAAAAAA CGTCA GCGA TGACG ACAACTCACTCTACA ECS88_2571 2551994 - 2551848 - | hypothetical protein yfdY 2552191 - 2551949 - | conserved hypothetical protein; putative inner membrane protein ddg 2552544 - 2553464 + | palmitoleoyl-acyl carrier protein (ACP)-dependent acyltransferase TERM 3475 2553525 - 2553498 - T 78 -11.4 -2.90496 | opp_overlap 2553498, overlap 2553495 TCCCTCCTCAAATCA GCCATAATAACC TCAT GGTTTTTATGGC TTTTTTCTTAAGGTT TERM 3476 2553498 - 2553525 + T 100 -11.4 -5.4756 | opp_overlap 2553498 2553495 TCCCTCCTCAAATCA GCCATAATAACC TCAT GGTTTTTATGGC TTTTTTCTTAAGGTT TERM 3477 2553933 - 2553914 - T 100 -13.6 -4.8622 | opp_overlap 2553914 CTGTGCAATGAAAAA CAGGAGCC ATCA GGCTCCTG TTTGCATTTCTGGCG TERM 3478 2553914 - 2553933 + T 100 -13.6 -3.89215 | opp_overlap 2553914 CTGTGCAATGAAAAA CAGGAGCC ATCA GGCTCCTG TTTGCATTTCTGGCG yfdZ 2555194 - 2553956 - | putative aminotransferase, PLP-dependent TERM 3479 2554402 - 2554413 + g 77 -5.8 -4.63218 | TAATACGTGCCAACG CGCT GACC AGCG TTTTGTTACCGACCA TERM 3480 2556178 - 2556165 - g 70 -3.7 -4.59773 | overlap 2556167 2556168 GTTGAGGGCGAAAAA GAGGC CAGC GCCGC GCGGCAGGCCAAGCT TERM 3481 2556188 - 2556167 - g 72 -7.9 -3.91506 | gap 1, overlap 2556165 2556168 TGAGGGCGAAAAAGA GGCCAG-CGC CGC GCGGCAGGCC AAGCTGGCGCTGGAT TERM 3482 2556439 - 2556418 - g 81 -6.7 -4.7078 | TGAATTACGGAAAAA TCATCATTA AAAA CAATGATGA AGCCCACCGCACACC ypdA 2555571 - 2557268 + | putative sensory kinase in two-component system with YpdB ypdB 2557283 - 2558020 + | putative response regulator in two-component system with YpdA TERM 3483 2558555 - 2558571 + G 84 -7.9 -4.60797 | overlap 2558542 ATGCCGCCGGGCAAT TCGCAGC CGC GCGGCGA TTTTCTCTATCACAG TERM 3484 2558624 - 2558647 + G 82 -3 -5.21709 | overlap 2558634 2558635 AATTATGCCCAGCCG CTCACCCGCG AGAG CGTGGCTCAG TTTTTTAATATCACG ypdC 2558033 - 2558890 + | putative DNA-binding protein ypdD 2561388 - 2558893 - | putative fused PTS enzymes (multiphosphoryl transfer protein): Hpr component ; enzyme I component ; enzyme IIA component TERM 3485 2559746 - 2559722 - G 78 -8.5 -4.23213 | opp_overlap 2559722 CCGATACTGAAGAAA TCGACCTCATC GCA GAAGTGGTCGA TGATGTAGCACACCG TERM 3486 2560274 - 2560308 + g 75 -5.1 -4.72486 | gap 2, opp_overlap 2560279, overlap 2560277 2560279 2560279 CGCTTTTTATCACGG GAATAGGC-CA-GCTGC GCG GCAGCTTGCGCCTGTTG TTTTTGGCGTTTATC TERM 3487 2560277 - 2560305 + g 77 -6.8 -4.45259 | gap 2, opp_overlap 2560279, overlap 2560274 2560279 2560279 TTTTTATCACGGGAA TAGGC-CA-GCTGC GCG GCAGCTTGCGCCTG TTGTTTTTGGCGTTT ypdE 2562450 - 2561413 - | broad substrate metalloaminopeptidase ypdF 2563535 - 2562450 - | Xaa-Pro and Met-Xaa peptidase TERM 3488 2562896 - 2562855 - G 100 -15.4 -3.22298 | gap 2 GCCATTCACCAGCAA GGTGCGCGTCATATCAGAGC AGTA GCCCTGATA-GA-GCGCACC GAAATCGAGAGTGAC TERM 3489 2562934 - 2562985 + g 81 -13 -2.62184 | gap 1, opp_overlap 2562933 CCCGCTGTAACAATC TTGTCGCTGGC-TTTGCCGTGCGGC AGC GCCCCACGCCAGCCGCTGGCGACAA TGGTGTCAAAAGAGG ypdG 2564798 - 2563551 - | putative enzyme IIC component of PTS TERM 3490 2564226 - 2564252 + g 76 -12.4 -2.54732 | opp_overlap 2564228 2564233, overlap 2564225 2564228 2564233 GGTTTTGAACGCTAA CAGGAAATCCGG TAA CTGGATTTTCTG GTTCATCCATTTCAC TERM 3491 2564233 - 2564245 + g 72 -5.5 -4.56607 | opp_overlap 2564228 2564233, overlap 2564228 2564226 2564225 AACGCTAACAGGAAA TCCGG TAA CTGGA TTTTCTGGTTCATCC ypdH 2565146 - 2564820 - | putative enzyme IIB component of PTS TERM 3492 2565352 - 2565327 - R 72 -8.3 -3.70674 | overlap 2565325 2565328 2565330 GTATGATTTAAAAGA TTATCGGGAGA GTTA CCTCCCGATAT AACAGGAAGGATTTA TERM 3493 2565351 - 2565328 - R 79 -11.8 -2.81922 | overlap 2565327 2565325 2565330 TATGATTTAAAAGAT TATCGGGAGA GTTA CCTCCCGATA TAACAGGAAGGATTT TERM 3494 2565349 - 2565330 - R 72 -10 -2.95081 | overlap 2565328 2565327 2565325 TGATTTAAAAGATTA TCGGGAGA GTTA CCTCCCGA TATAACAGGAAGGAT glk 2566330 - 2565365 - | glucokinase yfeO 2566534 - 2567790 + | putative ion channel protein ypeC 2567905 - 2568231 + | hypothetical protein TERM 3495 2568288 - 2568255 - T 75 -9.5 -3.44319 | opp_overlap 2568265, overlap 2568233 2568256 GTCAATGGAGCACAA TGCCTGATGCGACGC TAGC GCGTCTTATCAGGCC TACAAACCAGCTCTT TERM 3496 2568287 - 2568256 - T 84 -13 -2.6627 | opp_overlap 2568265, overlap 2568233 2568255 TCAATGGAGCACAAT GCCTGATGCGACGC TAGC GCGTCTTATCAGGC CTACAAACCAGCTCT mntH 2569610 - 2568372 - | manganese/divalent cation transporter TERM 3497 2569641 - 2569626 - H 72 -7.6 -4.07568 | opp_overlap 2569626 CTTGTGCCTCTAAAA CATAGC CTTT GCTATG TTTCATGCTACGTTA TERM 3498 2570539 - 2570560 + G 70 -7.3 -4.00782 | CGTCGTTGCGGCGCT GGTACTGAA CATG TTCAGCACC TTTATCGTGCTGTCG nupC 2569946 - 2571148 + | nucleoside (except guanosine) transporter TERM 3499 2571198 - 2571151 - T 100 -17.2 -3.01791 | opp_overlap 2571152 2571165, overlap 2571154 2571165 ACTGGTGCTGTAAGA CCATACATAAAAAAGCCGGGGA TAAT TCCCCGGCTTTTTTACGCCTGT TAATCAGCTAATGGC TERM 3500 2571152 - 2571197 + T 100 -16.3 -3.17212 | opp_overlap 2571151 2571154 2571165, overlap 2571165 CTGGTGCTGTAAGAC CATACATAAAAAAGCCGGGGA TAAT TCCCCGGCTTTTTTACGCCTG TTAATCAGCTAATGG TERM 3501 2571195 - 2571154 - T 100 -17.5 -2.73875 | opp_overlap 2571152 2571165, overlap 2571151 2571165 GGTGCTGTAAGACCA TACATAAAAAAGCCGGGGA TAAT TCCCCGGCTTTTTTACGCC TGTTAATCAGCTAAT TERM 3502 2571184 - 2571165 - T 100 -15 -5.43414 | opp_overlap 2571165 2571152, overlap 2571154 2571151 ACCATACATAAAAAA GCCGGGGA TAAT TCCCCGGC TTTTTTACGCCTGTT TERM 3503 2571165 - 2571184 + T 100 -15 -5.04987 | opp_overlap 2571154 2571151 2571165, overlap 2571152 ACCATACATAAAAAA GCCGGGGA TAAT TCCCCGGC TTTTTTACGCCTGTT yfeA 2573387 - 2571198 - | putative diguanylate cyclase TERM 3504 2572668 - 2572652 - G 77 -2.9 -5.03227 | AGATGATAAAGAAAA CAGGTAC CAG GTAACCG GCAATAAAGTCATTT TERM 3505 2573466 - 2573478 + H 79 -4.8 -5.09895 | opp_overlap 2573459, overlap 2573454 GAAGCAAACAGGGGC CAGC CTGTT GCTG TTTTTTCAGTCAGTG TERM 3506 2573565 - 2573584 + H 77 -9.2 -3.73107 | opp_overlap 2573565 GGCAGAGACAAAAAA CCCCCGCT TTGC AGCGAGGG TTTGAAATTTGGTGG TERM 3507 2573584 - 2573565 - H 100 -11.4 -5.4251 | opp_overlap 2573565 GGCAGAGACAAAAAA CCCCCGCT TTGC AGCGAGGG TTTGAAATTTGGTGG yfeC 2574020 - 2574364 + | putative nucleic acid-binding transcriptional regulator TERM 3508 2574491 - 2574477 - g 71 -2.8 -4.87318 | overlap 2574469 TGGAAAACGGAAAAA TTTCCC GGC GTGAAA GGCGGTCGTGCCAGA yfeD 2574366 - 2574758 + | putative nucleic acid-binding transcriptional regulator TERM 3509 2574803 - 2574753 - T 89 -14.9 -2.84059 | opp_overlap 2574767 2574802, overlap 2574767 GACATAGATGAATCA GCATAAATAAAAAACGGCAGGGG TATCT CTCCTGCCGTTTATCTTTTATGC GCTAATTAGTGCTGA TERM 3510 2574789 - 2574767 - T 100 -10.5 -5.73978 | opp_overlap 2574767, overlap 2574753 AGCATAAATAAAAAA CGGCAGGGG TATCT CTCCTGCCG TTTATCTTTTATGCG TERM 3511 2574767 - 2574789 + T 100 -12.7 -4.51238 | opp_overlap 2574767 2574753 AGCATAAATAAAAAA CGGCAGGGG TATCT CTCCTGCCG TTTATCTTTTATGCG gltX 2576224 - 2574809 - | glutamyl-tRNA synthetase TERM 3512 2576914 - 2576882 - R 72 -9.9 -3.19463 | opp_overlap 2576883 2576891 2576910, overlap 2576883 2576891 TGCACGACCCACCAA TGTAAAAAAGCGCCC TAA AGGCGCTTTTTTGCT ATCTGCAATTTGCGA TERM 3513 2576883 - 2576913 + r 89 -14.9 -2.9348 | opp_overlap 2576882 2576883 2576891, overlap 2576891 2576910 GCACGACCCACCAAT GTAAAAAAGCGCC CTAAA GGCGCTTTTTTGC TATCTGCAATTTGCG TERM 3514 2576913 - 2576883 - R 84 -13.4 -2.51464 | opp_overlap 2576883 2576891 2576910, overlap 2576882 2576891 GCACGACCCACCAAT GTAAAAAAGCGCCC TAA AGGCGCTTTTTTGC TATCTGCAATTTGCG TERM 3515 2576891 - 2576905 + r 95 -8.5 -5.24989 | opp_overlap 2576883 2576882 2576891, overlap 2576883 CACCAATGTAAAAAA GCGCC CTAAA GGCGC TTTTTTGCTATCTGC TERM 3516 2576905 - 2576891 - R 93 -9.2 -5.17576 | opp_overlap 2576891 2576883, overlap 2576883 2576882 CACCAATGTAAAAAA GCGCCC TAA AGGCGC TTTTTTGCTATCTGC xapR 2577875 - 2576991 - | DNA-binding transcriptional activator TERM 3517 2577800 - 2577787 - G 76 -9.5 -3.75535 | TGAGACATATTTAAA CGCGC TGCT GCGCG ACCAAAATGCAACTC TERM 3518 2578118 - 2578096 - R 72 -5.5 -4.4648 | ACCTTTATCATAAAA GCAGCCCCA AGGAA CAGAGCTGC GAATCCTTTTAATGT xapB 2579383 - 2578127 - | xanthosine transporter TERM 3519 2578807 - 2578819 + g 88 -5.5 -5.24129 | overlap 2578797 CCAGCTTGCTGGCAA GCGAT GTA GTCGC TTTTTTCTCCGCAAC TERM 3520 2579148 - 2579137 - G 79 -2.2 -5.24531 | ATGCCGCATAAAAAA GTAC GCCC GCAC ACACCAGGTGACACA TERM 3521 2579407 - 2579427 + r 100 -13.3 -4.66418 | opp_overlap 2579407, overlap 2579408 CCTTGTCGCATCATA TGGCCTCAC TCA GTGAGGCCG TTTATTGTTGTTTTA TERM 3522 2579427 - 2579407 - R 74 -11.1 -2.78384 | opp_overlap 2579407 2579408 CCTTGTCGCATCATA TGGCCTCAC TCA GTGAGGCCG TTTATTGTTGTTTTA TERM 3523 2579408 - 2579426 + r 100 -14.6 -3.37411 | opp_overlap 2579407, overlap 2579407 CTTGTCGCATCATAT GGCCTCAC TCA GTGAGGCC GTTTATTGTTGTTTT xapA 2580277 - 2579444 - | purine nucleoside phosphorylase II TERM 3524 2579731 - 2579743 + g 78 -9.1 -3.92832 | opp_overlap 2579720 2579719 ACACGCCCTCCGTCA GAGGG AAC CCCTC TTCTTTCGCCACTTT yfeN 2580526 - 2581290 + | putative outer membrane protein TERM 3525 2581296 - 2581318 + T 86 -13.5 -2.59526 | overlap 2581291 TAATTTCTGATTGAT TACTGCCGG AGCTC CCGGCAGTA TGAATTCACTTTATA yfeR 2582255 - 2581329 - | putative DNA-binding transcriptional regulator TERM 3526 2582563 - 2582578 + G 73 -9 -3.69354 | TTTGTGGGTAATGTG CAGCAC CTTC GTGCTG TTTCCGATTCTGGGC yfeH 2582345 - 2583343 + | putative sodium/bile acid symporter family (mazG-like) ECS88_2600 2583651 - 2583340 - | hypothetical protein ligA 2585575 - 2583560 - | DNA ligase, NAD(+)-dependent TERM 3527 2585614 - 2585598 - R 95 -10.8 -4.67904 | CATCAATGCTAAAAA CCCCCG ACAAG CGGGGG TTCGAAGAGGAGTTA zipA 2586644 - 2585646 - | cell division protein involved in Z ring assembly TERM 3528 2586745 - 2586779 + H 70 -2.8 -5.02476 | CACTATTAACTTTCA CAGCACAAAGATAGAT GAA ATCGTGCTTTTTGCTG TTTTTTCGAACATAT TERM 3529 2586898 - 2586908 + G 71 -2.4 -4.98616 | TCATTCACATCTGCC CCAC GCA GCGG TTTTTACTATTTTGC TERM 3530 2587177 - 2587187 + G 72 -6.8 -4.20516 | AACTGGATTGCTGCT CCGT TCA ACGG TTTATTGGCTGAACA cysZ 2586874 - 2587635 + | putative inner membrane protein TERM 3531 2587694 - 2587675 - f 80 -10.6 -3.34398 | opp_overlap 2587675, overlap 2587673 CGTTTGTGTGAAACA GGGGTGGC TTAT GCCGCCCC TTATTCCATCTTGCA TERM 3532 2587675 - 2587694 + F 100 -12.8 -3.7347 | opp_overlap 2587675 2587673 CGTTTGTGTGAAACA GGGGTGGC TTAT GCCGCCCC TTATTCCATCTTGCA TERM 3533 2588300 - 2588286 - g 82 -3.4 -5.19261 | overlap 2588287 AAATTCATGAAAAAA CCACCG GTC CGGAGA TCTGGGAAGATACCG cysK 2587820 - 2588791 + | cysteine synthase A, O-acetylserine sulfhydrolase A subunit TERM 3534 2588835 - 2588820 - f 93 -9 -5.08011 | opp_overlap 2588820, overlap 2588811 AAAATGCGTAAAAAA GCACCT TTTT AGGTGC TTTTTTGTGGCCTGC TERM 3535 2588820 - 2588835 + F 100 -9 -5.26316 | opp_overlap 2588811 2588820 AAAATGCGTAAAAAA GCACCT TTTT AGGTGC TTTTTTGTGGCCTGC ptsH 2589175 - 2589432 + | phosphohistidinoprotein-hexose phosphotransferase component of PTS system (Hpr) TERM 3536 2589800 - 2589759 - g 72 -8.9 -3.73402 | gap 1, opp_overlap 2589765 2589765, overlap 2589764 2589767 ATAGCCCTGATTAAA GATAAGCACATGA-CAGCTG ACG CAGCTGCTCATGAAGTTATC GAAGGTCAGGCTTCT TERM 3537 2589792 - 2589767 - g 75 -11.3 -3.00128 | gap 1, opp_overlap 2589765 2589765, overlap 2589764 2589759 GATTAAAGATAAGCA CATGA-CAGCTG ACG CAGCTGCTCATG AAGTTATCGAAGGTC ptsI 2589477 - 2591204 + | PEP-protein phosphotransferase of PTS system (enzyme I) crr 2591245 - 2591754 + | glucose-specific enzyme IIA component of PTS TERM 3538 2591791 - 2591774 - T 100 -12.7 -4.65895 | opp_overlap 2591774 TGCTGCAGTGAAAAA TGGCGCC CATC GGCGCCA TTTTTTTATGCTTCA TERM 3539 2591774 - 2591791 + T 100 -12.7 -5.71983 | opp_overlap 2591774 TGCTGCAGTGAAAAA TGGCGCC CATC GGCGCCA TTTTTTTATGCTTCA pdxK 2592648 - 2591797 - | pyridoxal-pyridoxamine kinase/hydroxymethylpyrimidine kinase TERM 3540 2592088 - 2592101 + g 77 -6.7 -4.56597 | CACCCACTTTAATGT GTCTG AAAG CAGAC TTTTTGCGGCAGCAA yfeK 2592753 - 2593121 + | hypothetical protein cysM 2594035 - 2593124 - | cysteine synthase B (O-acetylserine sulfhydrolase B) TERM 3541 2593197 - 2593181 - G 77 -12.3 -2.70354 | overlap 2593177 CCCGGTAGAAAGGTA GCGATCG CCA CGATCGC AGATGATCGCCACCA TERM 3542 2594148 - 2594121 - R 90 -9.1 -4.72272 | gap 1, opp_overlap 2594121 2594138 CCTTGCCATTAAAAA GCCCGGA-TCGC GGGAA GCGCCTCCGGGC GTTTAACATTCACTC cysA 2595267 - 2594170 - | sulfate/thiosulfate transporter subunit ; ATP-binding component of ABC superfamily TERM 3543 2594287 - 2594264 - G 72 -7.4 -3.99228 | gap 1, overlap 2594267 AGACCAACGTATAAA CGATCGCCACG CTG CGGGGC-ATCG TCGCCATGCATCACG cysW 2596132 - 2595257 - | sulfate/thiosulfate transporter subunit ; membrane component of ABC superfamily cysU 2596965 - 2596132 - | sulfate/thiosulfate transporter subunit ; membrane component of ABC superfamily cysP 2597981 - 2596965 - | thiosulfate transporter subunit ; periplasmic-binding component of ABC superfamily TERM 3544 2598126 - 2598103 - R 86 -11 -4.01135 | GGGAATAAGACGAAA TCCTCCCCAC AAAT GCAGGGAGGA AACAGAGGTGAATCA ucpA 2598930 - 2598139 - | putative oxidoredutase, sulfate metabolism protein yfeU 2599210 - 2600106 + | putative PTS component; possibly regulatory murP 2600110 - 2601534 + | putative fused PTS enzymes: IIB component ; IIC component TERM 3545 2601688 - 2601661 - T 100 -11.3 -5.16071 | opp_overlap 2601661 AAGCAGTAATAAAAA GGCCAGTCAGT TGTGTT ACTGGCTGGCC TTTAATCAATGAATC TERM 3546 2601661 - 2601688 + T 100 -13.5 -3.767 | opp_overlap 2601661 AAGCAGTAATAAAAA GGCCAGTCAGT TGTGTT ACTGGCTGGCC TTTAATCAATGAATC TERM 3547 2601719 - 2601709 - T 70 -6.8 -4.10331 | TCAATGAATCAGAAA CGCT TAC AGCG CCATCAGCTTGTCCA yfeX 2602611 - 2601712 - | hypothetical protein TERM 3548 2602146 - 2602171 + g 74 -6 -4.54047 | opp_overlap 2602139 2602137, overlap 2602148 TGATAACAGCCACTT CGCGGCGCGT CTCTTC ACCCGCCGGG TTTTCTGTACCGTCA TERM 3549 2602651 - 2602633 - R 85 -10.3 -4.20868 | opp_overlap 2602633 TCCTGAAAATAATAA TGCCACG CAATC CGTGGCA TTGTTGGGCGCTATT TERM 3550 2602633 - 2602651 + r 78 -10.3 -3.63341 | opp_overlap 2602633 TCCTGAAAATAATAA TGCCACG CAATC CGTGGCA TTGTTGGGCGCTATT yfeY 2603282 - 2602707 - | hypothetical protein TERM 3551 2603054 - 2603034 - G 77 -3.1 -5.06451 | CATCACTTCAAAAAA GCGCACCAC GTT GCCGTTCGC GGTTTTCATTCCGCT yfeZ 2603792 - 2603343 - | conserved hypothetical protein; putative inner membrane protein TERM 3552 2603587 - 2603571 - G 75 -4.3 -4.75372 | overlap 2603573 ACCACTCAGCAAAAA TGCCAGC ACC GCCGGAA TACCGGGAATCAACC ypeA 2604204 - 2603779 - | putative acyltransferase with acyl-CoA N-acyltransferase domain TERM 3553 2605219 - 2605208 - g 72 -5.8 -4.36914 | overlap 2605209 CGTTTCGCCAGAAAA TCGC CACA GCGA TTGCCGAAGGCGTGA amiA 2604418 - 2605287 + | N-acetylmuramoyl-l-alanine amidase I TERM 3554 2605515 - 2605561 + G 100 -13.9 -3.69323 | gap 2 GCCTGCTTCCGCCAC CGCTCATCGTC-CGGAACT-TGC CGG GCGCAGTTTCGAGGCGATGGGCG TTTCACTGGTAGTGC TERM 3555 2605822 - 2605848 + G 84 -10.8 -3.81951 | opp_overlap 2605813 2605815 2605825, overlap 2605825 CTCAAACATCGTAAC GAACAGCGCGGC ATT GGCGGGCTGTTC TTTGATGATCTGAAC TERM 3556 2605825 - 2605845 + G 70 -6.7 -4.03811 | opp_overlap 2605813 2605815 2605825, overlap 2605822 AAACATCGTAACGAA CAGCGCGGC ATT GGCGGGCTG TTCTTTGATGATCTG TERM 3557 2605974 - 2605954 - g 75 -6.7 -4.29738 | GTAGAGCGACGAAAA GCGATGGCC TAC GGCGAGCGC GAGCGCAATTTTCAG hemF 2605291 - 2606190 + | coproporphyrinogen III oxidase yfeG 2607248 - 2606196 - | putative DNA-binding transcriptional regulator yffI 2607794 - 2607294 - | putative ethanolaminosome structural protein with putative role in ethanolamine utilization TERM 3558 2607342 - 2607374 + g 70 -4.8 -4.56597 | overlap 2607344 TTTACGTAACGTCCC GGCAGAAAAGAGCT GTTCG AGCGCATTTCTGGC TTTTTCCAGCGGCCA eutL 2608466 - 2607807 - | putative carboxysome-related structural protein with putative role in ethanolamine utilization eutC 2609363 - 2608476 - | ethanolamine ammonia-lyase, small subunit (light chain) TERM 3559 2609399 - 2609429 + r 75 -8.9 -3.62096 | gap 1, opp_overlap 2609396 TCAGAAGAACAGTGA CGGATCGCCCGCCC GTTT GGTCAGGCGA-CCG TTTGCCATAATGCCC eutB 2610745 - 2609384 - | ethanolamine ammonia-lyase, large subunit, heavy chain eutA 2612160 - 2610757 - | reactivating factor for ethanolamine ammonia lyase TERM 3560 2611824 - 2611814 - G 77 -6.8 -4.46212 | overlap 2611815 CTGGCGACGACAAAA TCGC CCA GCGA CCGGGAGAGCGCCAT eutH 2613383 - 2612157 - | putative ethanolamine transporter TERM 3561 2613366 - 2613348 - G 74 -7.5 -4.12254 | opp_overlap 2613348 2613347 2613350 TATCAGCATAAAGAA CATCATG ATGTA CATGATG ATTTCGTTAATTCCC TERM 3562 2613514 - 2613545 + r 81 -12.2 -3.00022 | opp_overlap 2613477, overlap 2613477 2613524 ATTGCACCGCGCCAC TGGCGGATGCGGCG TGAA CGCCTTATCCGCCC TATATGTGCAATCCC TERM 3563 2613564 - 2613598 + r 84 -9.9 -4.1552 | opp_overlap 2613574 2613577, overlap 2613565 ATGTGCAATCCCGTC GGCCGGATAAGACGC GGCAA GCGTCGCATCCGGCA TTTATTGCGCCGCTG TERM 3564 2613565 - 2613597 + r 86 -13.4 -3.08991 | opp_overlap 2613574 2613577, overlap 2613564 TGTGCAATCCCGTCG GCCGGATAAGACGC GGCAA GCGTCGCATCCGGC ATTTATTGCGCCGCT eutG 2614787 - 2613600 - | putative alcohol dehydrogenase in ethanolamine utilization; ethanolaminosome eutJ 2615613 - 2614777 - | putative chaperonin, ethanolamine utilization protein TERM 3565 2614967 - 2614988 + g 79 -3.6 -5.14563 | CCCTGCCCTTCAATA TGCCGGGC CACAAT GTCCGCCA TTTTTTCGTACACCG TERM 3566 2615645 - 2615629 - R 71 -8.7 -3.55444 | overlap 2615632 CGGTTACTCCTTAAA CAATGCG AAA CGCATCG ACTAATACACAGCGA eutE 2617027 - 2615624 - | putative aldehyde dehydrogenase, ethanolamine utilization protein TERM 3567 2615688 - 2615653 - G 70 -9.8 -3.15699 | gap 2, opp_overlap 2615657, overlap 2615651 2615655 ACGCATCGACTAATA CACAGCGACGCAGACG GACAAA CGTCCGCG-CGCTG-G TTACCCCTTCACCGG TERM 3568 2615687 - 2615655 - G 85 -13.5 -3.13867 | gap 1, opp_overlap 2615657, overlap 2615653 2615651 GCATCGACTAATACA CAGCGACGCAGACG GACAAA CGTCCGCG-CGCTG GTTACCCCTTCACCG TERM 3569 2616305 - 2616337 + g 72 -6.2 -4.33803 | gap 1 TTCATCCACCACTAC CGGCGGGTTGCCAGC GCCT GC-GGCAATCAGACG TTTATTGGTGTGTTT TERM 3570 2616513 - 2616529 + g 71 -2.1 -5.00616 | overlap 2616514 TGGTTGAGCAGCGTG ATCGCCC GCT GGGAGAC TTTTTTCGCCGCCGG TERM 3571 2616732 - 2616746 + g 70 -3.5 -4.60924 | gap 1, opp_overlap 2616718, overlap 2616728 ACGCCTGGTGTGCCG CG-CGC CTGA GCGACG TTTTTGGCAAATTTA cchB 2617326 - 2617039 - | putative carboxysome-like ethanolaminosome structural protein, ethanolamine utilization protein TERM 3572 2617425 - 2617400 - R 70 -9 -3.15182 | overlap 2617398 ATGAAAAAGGAGAGA GCGTGACGCC CGAATC GACGTCACAC AGGGTGATTACAGGT eutI 2618780 - 2617764 - | putative phosphotransacetylase subunit eutT 2619580 - 2618777 - | putative cobalamin adenosyltransferase in ethanolamine utilization TERM 3573 2619430 - 2619419 - G 70 -5.8 -4.16842 | opp_overlap 2619422 TTCATCGTCAACAAA CAGG CGGC CCTG CTCGTCAATAAACTT eutQ 2620278 - 2619577 - | conserved hypothetical protein involved in degradation of ethanolamine eutP 2620732 - 2620253 - | putative nucleoside triphosphate hydrolase domain protein TERM 3574 2620631 - 2620641 + gr 77 -3.2 -5.06414 | ATTATCATTAAATTC CACG GCC TGTG TTTTTCTTGCGAGGG ypfE 2621080 - 2620745 - | putative carboxysome-like ethanolaminosome structural protein with putative role in ethanol utilization TERM 3575 2620915 - 2620929 + g 90 -11.4 -3.86822 | opp_overlap 2620914 TCAACGCTAAATCAC CGGCGA TCA TCGCCG TTTCTCCGGGAGTTA TERM 3576 2621356 - 2621327 - R 100 -15.1 -3.66378 | overlap 2621328 TATATTGCAGCTAAA CCGCTTACCCTGA ATAT TCAGGGTAAGCGT GAGAGTTAAAAAAGA TERM 3577 2621355 - 2621328 - R 100 -18.6 -2.79505 | overlap 2621327 ATATTGCAGCTAAAC CGCTTACCCTGA ATAT TCAGGGTAAGCG TGAGAGTTAAAAAAG maeB 2623652 - 2621373 - | putative fused malic enzyme oxidoreductase ; putative phosphotransacetylase TERM 3578 2622446 - 2622425 - G 72 -10.1 -3.32769 | CGTCGAAATCAGCAA TCGGACGCG TCGC CACGCCCGA CTCCATCGCCGCTTT TERM 3579 2622810 - 2622823 + g 70 -3.8 -4.6635 | CAGCGCCAGGATCAT TGGC GCACGG GCCA TTTTCTTCACCATTT TERM 3580 2623091 - 2623101 + g 71 -3.2 -4.82901 | opp_overlap 2623080 AAACCACCATCCGCA CGTC GGA GATG TTTTTCTCCACCACG TERM 3581 2624410 - 2624451 + G 100 -13.1 -5.04325 | opp_overlap 2624393, overlap 2624411 GCAACCTGACGCTGC TGTTTTCTTTTGCACAGGC GCGG GCCTGTGCAGAAGCAGGCG TTTTTCTGATTTCGC TERM 3582 2624411 - 2624450 + G 100 -14.4 -3.6151 | overlap 2624410 CAACCTGACGCTGCT GTTTTCTTTTGCACAGGC GCGG GCCTGTGCAGAAGCAGGC GTTTTTCTGATTTCG talA 2623941 - 2624891 + | transaldolase A TERM 3583 2625825 - 2625814 - g 85 -7.2 -4.7657 | overlap 2625815 2625816 GAAAAAGGCGAAAAA GCGC AGCA GCGC TGGAATGAGAAGTTT tktB 2624911 - 2626914 + | transketolase 2, thiamin-binding TERM 3584 2627032 - 2627009 - T 90 -12.4 -3.35798 | opp_overlap 2627023 ACGGGTGATCCACAA CGTGGGCCAG GCGT CTGGCCCATG CCAGTTATCGCAGGT ypfG 2628034 - 2626991 - | hypothetical protein TERM 3585 2628033 - 2628022 - G 77 -5.8 -4.6008 | AAAAGAGAAGGAAAA TGCG ATAT CGCA TGGACGGTACGACCC yffH 2628735 - 2628160 - | putative NUDIX hydrolase TERM 3586 2628736 - 2628785 + r 80 -9.3 -4.03234 | overlap 2628737 GATTTGTTGCGTCAT ACCGACTCCACAGCGCGAAATGA ACAA TTATCTTACGCTGTGAAGTCGGG TTTGTCTGCGCAGGC TERM 3587 2628737 - 2628784 + r 83 -12.8 -3.01726 | overlap 2628736 ATTTGTTGCGTCATA CCGACTCCACAGCGCGAAATGA ACAA TTATCTTACGCTGTGAAGTCGG GTTTGTCTGCGCAGG aegA 2630782 - 2628803 - | fused putative oxidoreductase: FeS binding subunit ; NAD/FAD-binding subunit TERM 3588 2631006 - 2631029 + G 100 -5.2 -5.55698 | gap 1, opp_overlap 2631003, overlap 2631006 ATTGTTAAACGACCC GTCTC-GGCCA GTC TGGCCCGGGCC TTTTTTTACATTGTG TERM 3589 2631006 - 2631028 + G 72 -7.6 -3.91792 | opp_overlap 2631003, overlap 2631006 ATTGTTAAACGACCC GTCTCGGCCA GTC TGGCCCGGGC CTTTTTTTACATTGT TERM 3590 2631705 - 2631695 - g 71 -3.2 -4.81212 | overlap 2631697 GTCAGTAGAAGAAAA GACC CGC GATC TCCACGAGGCCAAGC narQ 2630988 - 2632688 + | sensory histidine kinase in two-component regulatory system with NarP (NarL) TERM 3591 2632911 - 2632930 + G 82 -2.8 -5.26875 | gap 1, overlap 2632913 2632914 GGCAATCCTGTTGTG TCTGACAGG TAC CCTGGC-GA TTTTTTCATTGCCCG TERM 3592 2634846 - 2634829 - g 70 -6.9 -4.11363 | AACAAGATTAAAGAA GCTCGCG TTAT CGCCAGC AGCCCGCCAGCAATT acrD 2632852 - 2635965 + | aminoglycoside/multidrug efflux system TERM 3593 2636005 - 2635970 - f 73 -9.2 -3.53444 | opp_overlap 2635976 2635977, overlap 2635977 GCCCGGAATAAGCAA TAAAAAAGGCGACA TGCCAATG TGTCGCCCTTTTCA ACTTTCCGATTAAGA TERM 3594 2635998 - 2635977 - f 100 -7.3 -5.57396 | opp_overlap 2635977 2635976, overlap 2635970 ATAAGCAATAAAAAA GGCGACA TGCCAATG TGTCGCC CTTTTCAACTTTCCG TERM 3595 2636016 - 2636040 + F 77 -11.5 -2.79609 | opp_overlap 2636019 2636022, overlap 2636015 2636013 2636019 2636022 TTTCAACTTTCCGAT TAAGAACCTGC TCA GCGGGTTCTTG CTGTTTGTACTTTGT TERM 3596 2636019 - 2636037 + F 81 -11 -3.52009 | opp_overlap 2636019 2636022, overlap 2636016 2636015 2636013 2636022 CAACTTTCCGATTAA GAACCTGC TCA GCGGGTTC TTGCTGTTTGTACTT yffB 2636504 - 2636860 + | hypothetical protein dapE 2636864 - 2637991 + | N-succinyl-diaminopimelate deacylase ypfN 2638019 - 2638219 + | hypothetical protein TERM 3597 2638265 - 2638220 - T 75 -9.8 -3.55973 | opp_overlap 2638227, overlap 2638216 2638225 CAACCGAAGAAGTAA GC-TAAGTGGCCGGATAAGGCG TTAA CGCCGCATCCGGCCA-TGATGC CTGATACAGTCTTAT TERM 3598 2638260 - 2638225 - T 100 -15.4 -3.26428 | opp_overlap 2638227, overlap 2638220 2638216 GAAGAAGTAAGCTAA GTGGCCGGATAAGGCG TTAA CGCCGCATCCGGCCAT GATGCCTGATACAGT ypfH 2638998 - 2638300 - | putative hydrolase ypfI 2641087 - 2639072 - | putative hydrolase TERM 3599 2639221 - 2639231 + g 79 -4.6 -4.96848 | opp_overlap 2639216 TGGTACATAACTGCG CGTC ACT GGCG TTTTTCTGTAAACGC TERM 3600 2640698 - 2640687 - G 72 -5.8 -4.39002 | AAATGCTGGACAAAA TGCG GCGT CGCA ATAGGGTCAGGGCAA ypfJ 2641965 - 2641102 - | hypothetical protein purC 2642846 - 2642133 - | phosphoribosylaminoimidazole-succinocarboxamide synthetase TERM 3601 2643028 - 2643055 + r 74 -4 -4.90266 | opp_overlap 2643032, overlap 2643030 2643032 CGTATCATATCAGAA AAAAGGGCCGGA TGAC TCCAGCCCTGTA TTTTTACTTGCTAAA TERM 3602 2643030 - 2643053 + r 70 -6.6 -4.07008 | opp_overlap 2643032, overlap 2643028 2643032 TATCATATCAGAAAA AAGGGCCGGA TGAC TCCAGCCCTG TATTTTTACTTGCTA TERM 3603 2643051 - 2643032 - R 100 -11.4 -5.34555 | opp_overlap 2643032 2643030 2643028 TCATATCAGAAAAAA GGGCCGGA TGAC TCCAGCCC TGTATTTTTACTTGC TERM 3604 2643032 - 2643051 + r 75 -9.2 -3.61182 | opp_overlap 2643032, overlap 2643030 2643028 TCATATCAGAAAAAA GGGCCGGA TGAC TCCAGCCC TGTATTTTTACTTGC nlpB 2644093 - 2643059 - | lipoprotein TERM 3605 2643682 - 2643710 + g 77 -6 -4.62069 | opp_overlap 2643663, overlap 2643685 TGGTCAGTGTCTGAC CAGCATCATCAC GTTGG GTGATGGTGTAG TTTTTCGCCTGCAGC dapA 2644988 - 2644110 - | dihydrodipicolinate synthase gcvR 2645134 - 2645706 + | DNA-binding transcriptional repressor, regulatory protein accessory to GcvA bcp 2645706 - 2646176 + | thiol peroxidase, thioredoxin-dependent perM 2647336 - 2646275 - | putative permease TERM 3606 2648028 - 2648002 - g 100 -16.6 -3.07816 | opp_overlap 2648011 2648018, overlap 2648004 GCGCGAGCGATGGAA GATCAGCAGCGC AGC GCGCCGCTGACC TGGGTCGGCGCGTTA TERM 3607 2648026 - 2648004 - g 95 -15.6 -3.09878 | opp_overlap 2648011 2648018, overlap 2648002 GCGAGCGATGGAAGA TCAGCAGCGC AGC GCGCCGCTGA CCTGGGTCGGCGCGT yfgC 2647549 - 2649012 + | putative peptidase yfgD 2649033 - 2649392 + | putative oxidoreductase hda 2650276 - 2649530 - | ATPase regulatory factor involved in DnaA inactivation TERM 3608 2650286 - 2650328 + r 76 -7.7 -4.26393 | opp_overlap 2650282, overlap 2650292 TACCACAGAATCCCA TGATGTTTGAACCGGGCAG CAACA CTGCCCGGTCGGTACATTA TTTGTCTGTTATATC uraA 2651615 - 2650326 - | uracil transporter TERM 3609 2650835 - 2650850 + g 79 -4 -5.04987 | gap 1 AACGGTGCAGACCTG GATC-GC GCA GCAGATC TTTTTTGACGATATT TERM 3610 2651656 - 2651690 + r 84 -4.3 -5.44198 | opp_overlap 2651664, overlap 2651659 2651664 ATAGGCGCTTTACTC AAAAAAAAGCCGACT CTTAA AGTCGGCTTTAATTA TTTTTATTCTTTATT TERM 3611 2651659 - 2651687 + r 80 -6 -4.74161 | opp_overlap 2651664, overlap 2651656 2651664 GGCGCTTTACTCAAA AAAAAGCCGACT CTTAA AGTCGGCTTTAA TTATTTTTATTCTTT TERM 3612 2651682 - 2651664 - R 100 -11 -5.81412 | opp_overlap 2651664 2651659 2651656 TTTACTCAAAAAAAA GCCGACTC TTA AAGTCGGC TTTAATTATTTTTAT TERM 3613 2651664 - 2651682 + r 85 -10.3 -4.2711 | opp_overlap 2651664, overlap 2651659 2651656 TTTACTCAAAAAAAA GCCGACT CTTAA AGTCGGC TTTAATTATTTTTAT upp 2652327 - 2651701 - | uracil phosphoribosyltransferase TERM 3614 2651835 - 2651862 + g 72 -8.4 -3.80573 | overlap 2651836 CCAGCGCAGCGATAC CTTCTGGTGCAG CTAC CAGCACCAGAAC TTTGATGCTGCTGCA TERM 3615 2651836 - 2651861 + g 75 -11.9 -2.88023 | overlap 2651835 CAGCGCAGCGATACC TTCTGGTGCAG CTAC CAGCACCAGAA CTTTGATGCTGCTGC purM 2652651 - 2653688 + | phosphoribosylaminoimidazole synthetase TERM 3616 2653829 - 2653798 - g 100 -13.7 -3.72027 | opp_overlap 2653824 AGTTTTCAGCAATAA GGCTGACGCGTTC GGCCTT GAACGCGCCCGCC AGGCGGGTATTGCAA TERM 3617 2653824 - 2653836 + G 72 -10.5 -3.02144 | opp_overlap 2653798 TCGGCCTTGAACGCG CCCGC CAG GCGGG TATTGCAACGCATAC purN 2653688 - 2654326 + | phosphoribosylglycinamide formyltransferase 1 TERM 3618 2654363 - 2654344 - f 74 -10.7 -2.78679 | opp_overlap 2654344, overlap 2654343 CCCCCGTAGTTAAAG CGCCAGC TCTGCC GCTGGCG TTTTTCAATTCACCT TERM 3619 2654344 - 2654363 + F 95 -10.7 -4.74504 | opp_overlap 2654344 2654343 CCCCCGTAGTTAAAG CGCCAGC TCTGCC GCTGGCG TTTTTCAATTCACCT TERM 3620 2656334 - 2656297 - g 70 -6.9 -4.10657 | overlap 2656298 TTATATTTTTGAAAA TGGCGGCGATAAAAAGG TCTA CCTTTCTTCCGCCGACT GGATGACGCGCAATA ppk 2654498 - 2656564 + | polyphosphate kinase, component of RNA degradosome TERM 3621 2656592 - 2656618 + G 74 -10.8 -3.23853 | overlap 2656590 ACACGATAAATCCCC TCGTCCGCAGGA GTT TGCTGCGGTCGA TCTTGGTTCAAACAG ppx 2656569 - 2658110 + | exopolyphosphatase TERM 3622 2658116 - 2658144 + T 100 -18.2 -3.6279 | CGCCGCTTAATGCTT TGCGGGCCGACG AGAAA TGTCGGCCCGCA TTATTCAGGCACTTT yfgF 2660392 - 2658149 - | conserved hypothetical protein; putative inner membrane protein TERM 3623 2660277 - 2660266 - G 90 -4.4 -5.32599 | GATAAAAGAGAAAAA CTTC ACCG GAAG AAATATGCGCGAAAG ECS88_2676 2660899 - 2660609 - | hypothetical protein TERM 3624 2661087 - 2661118 + H 74 -3.8 -4.94222 | CGGCTGCGAAATAAA TACATCATTAATAC ATAT GTTGTGATGATGTA TTTTTATAAATTATT yfgH 2661246 - 2661764 + | putative outer membrane lipoprotein yfgI 2661780 - 2662319 + | hypothetical protein TERM 3625 2662360 - 2662389 + T 90 -12.3 -3.41693 | opp_overlap 2662347 2662365, overlap 2662365 AATTCTTTAGGATAA AAAAACCCTCTGT AGTA ACAGAGGGTTTTG TTCATTCATAGTGCA TERM 3626 2662365 - 2662384 + T 100 -12.2 -4.80178 | opp_overlap 2662365, overlap 2662360 TTTAGGATAAAAAAA CCCTCTGT AGTA ACAGAGGG TTTTGTTCATTCATA TERM 3627 2662384 - 2662365 - T 100 -12.2 -5.67063 | opp_overlap 2662360 2662365 TTTAGGATAAAAAAA CCCTCTGT AGTA ACAGAGGG TTTTGTTCATTCATA guaA 2663990 - 2662413 - | GMP synthetase (glutamine aminotransferase) TERM 3628 2664052 - 2664030 - R 100 -14.9 -4.33674 | AACAGATAATATAAA TCGCCCGAC ATGAA GTCGGGCGA AGAGAATCAGGAGCC guaB 2665525 - 2664059 - | IMP dehydrogenase TERM 3629 2664525 - 2664501 - G 74 -8.5 -3.86524 | opp_overlap 2664523, overlap 2664523 ATATCGCCTGAGAAA CGGATACCGCC GTC AGCGATAACCG GAATGCCGGTACCTT TERM 3630 2664977 - 2664991 + g 73 -4.2 -4.79667 | overlap 2664988 ATCATCAACCACCAG CGCTTT TTC AACGCG TTTTTCGTGCATTTT TERM 3631 2665247 - 2665261 + g 74 -2.8 -5.00616 | CTGTGGATCAGTCAC CACG CCAGATT CGTG TTTTTTCACACGGCG xseA 2665687 - 2667063 + | exonuclease VII, large subunit TERM 3632 2667076 - 2667050 - T 93 -5.1 -5.49729 | overlap 2667052 2667073 AATCACGTAAAAAAA CGTCTAATCCG TAGAC CGGATAAGAGG CGCCAGCATCGCATC ECS88_2682 2675183 - 2667132 - | putative outer membrane protein; RatA precursor homolog TERM 3633 2672119 - 2672129 + g 74 -2.4 -5.09426 | GTCACCTTTACCTGT AGCG TTT CGCC TTTTTTCAGCTTCGC TERM 3634 2673496 - 2673475 - G 70 -5.8 -4.2828 | opp_overlap 2673473 2673470 2673487 TCCGAGGCAGTAAAA TCACTGCG CATTCT CGCGGTGA TGTGAGTTTTCACCC TERM 3635 2674490 - 2674480 - G 71 -3.2 -4.77165 | CGTTTGATAACAAAA GGAA TAT TCCC CACAACATTACCGAC TERM 3636 2675262 - 2675228 - R 91 -13.2 -3.14132 | opp_overlap 2675217, overlap 2675230 2675261 CGCTTGTCGCATCAA TATATTTTGCTTAATC CGG GATTAAGCAAAATATG CGGAAACAGCATTCC TERM 3637 2675260 - 2675230 - R 100 -15.8 -3.13403 | opp_overlap 2675217, overlap 2675228 CTTGTCGCATCAATA TATTTTGCTTAATC CGG GATTAAGCAAAATA TGCGGAAACAGCATT TERM 3638 2675292 - 2675269 - R 100 -15.4 -3.63589 | opp_overlap 2675217, overlap 2675261 CAAAATATGCGGAAA CAGCATTCCC TTGC GGGAATGCTG CTGAGTACGCGTTAT TERM 3639 2676318 - 2676336 + r 71 -4.5 -4.69962 | overlap 2676321 CTTCAGCGACTGGCC GACTGGC CTTAC GCCAATC TTATTTTTTGGTATA ECS88_2685 2678598 - 2676337 - | putative intimin ((attaching and effacing protein) or invasin protein (sivH-like) TERM 3640 2676795 - 2676808 + g 74 -2.3 -5.11389 | overlap 2676790 GTAAGGTACTGGAGA GGGTG ACAG TGCCC TTTTCTTTATCTTGT TERM 3641 2677603 - 2677617 + g 81 -10 -3.87815 | overlap 2677599 GCTACCCATGAGCGA GTGAGC CGC GCTCAC TTTGTCAGGATCAAG TERM 3642 2678498 - 2678535 + g 95 -15.7 -3.07043 | opp_overlap 2678498 TCGTTTTGCTTAACA TTTATCTCTGGCGCCGC GAAA GCAGCACCAGAGATAAA TGTTAGAATAATACA TERM 3643 2678535 - 2678498 - G 100 -20.1 -3.01712 | opp_overlap 2678498 TCGTTTTGCTTAACA TTTATCTCTGGCGCCGC GAAA GCAGCACCAGAGATAAA TGTTAGAATAATACA ECS88_2686 2678992 - 2678777 - | hypothetical protein der 2680527 - 2679055 - | GTPase involved in ribosome synthesis and maintenance TERM 3644 2680625 - 2680594 - R 100 -13.8 -3.90048 | opp_overlap 2680600, overlap 2680595 2680600 TCGTTGTTAAAAACA GGAAAACGGCCCCT GTCC AGGAGCCGTTTTCA AAGTGAACGACAGAG TERM 3645 2680624 - 2680595 - R 100 -17.3 -2.93708 | opp_overlap 2680600, overlap 2680594 2680600 CGTTGTTAAAAACAG GAAAACGGCCCCT GTCC AGGAGCCGTTTTC AAAGTGAACGACAGA TERM 3646 2680619 - 2680600 - R 100 -11.4 -4.60746 | opp_overlap 2680600, overlap 2680595 2680594 TTAAAAACAGGAAAA CGGCCCCT GTCC AGGAGCCG TTTTCAAAGTGAACG TERM 3647 2680600 - 2680619 + r 80 -9.2 -4.11216 | opp_overlap 2680595 2680594 2680600 TTAAAAACAGGAAAA CGGCCCCT GTCC AGGAGCCG TTTTCAAAGTGAACG yfgL 2681823 - 2680645 - | protein assembly complex, lipoprotein component TERM 3648 2681071 - 2681055 - G 78 -8.7 -4.18506 | overlap 2681067 CCAGCGCGAAAACAA CGCCGTT AAC AACGACG GGAGTCGTGTCAACA TERM 3649 2681227 - 2681216 - G 72 -7.2 -4.25283 | ACGGCCGCACCAAAA GCCG TTGC CGGC GCAGACTCGCCACGC yfgM 2682454 - 2681834 - | hypothetical protein TERM 3650 2681997 - 2682015 + g 85 -8.2 -4.56775 | GCAGCCCACCCTTCA CCTTTGAT AGC ATCAAGGG TTTTTAGCGCGGCAT TERM 3651 2682266 - 2682278 + g 82 -9.1 -4.25104 | TTTGCCTTCGCTCAC TGCGG TAA CCGCA TTTTGATAGGCAAGA hisS 2683746 - 2682472 - | histidyl tRNA synthetase TERM 3652 2683710 - 2683735 + g 86 -6.1 -5.03747 | CGCCAGGCAGGTAAT CGTTCATGCCG CGAA TGGCTTGAATG TTTTTTGCCACGTTT TERM 3653 2683819 - 2683773 - R 73 -3 -5.0916 | gap 1 TTCTGAATATAAAAA TGAACCCTCAACGCTTCCC TCAATGTTTC GGGA-GCCATGCGGGTTCA ATCATACACGGGAAG TERM 3654 2683848 - 2683828 - R 86 -13.3 -3.00298 | opp_overlap 2683822 GGGTTCAATCATACA CGGGAAGCG AGG CGCTTCCCA TCACGTTATTATTTT ispG 2684975 - 2683857 - | 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase yfgA 2686009 - 2685002 - | conserved hypothetical protein; putative HTH-type transcriptional regulator TERM 3655 2686289 - 2686252 - R 95 -12.2 -4.42653 | gap 1, overlap 2686254 ACTTCATTCATAAAA GATTACGCCACGG-TAC ATAAA GTAACCGTGGCGTAATG GCTATCAGACCGCTT TERM 3656 2686287 - 2686254 - R 100 -14.8 -3.82117 | gap 1, overlap 2686252 TTCATTCATAAAAGA TTACGCCACGG-TAC ATAAA GTAACCGTGGCGTAA TGGCTATCAGACCGC yfgB 2687448 - 2686294 - | putative Fe-S containing enzyme TERM 3657 2686673 - 2686661 - G 78 -10.5 -3.48593 | GATTTCTCCAGATAA CGGCG CAC CGCCG CAAGGAACGTTTCGA TERM 3658 2687537 - 2687506 - R 91 -8.7 -5.04249 | gap 2, opp_overlap 2687505 2687502 2687501, overlap 2687508 GGTTGAAAAAAGAAA CG-CCCCGG-TGAGC GGCT GCTCGTCCGGGGGCG CTGCATTGTACAAAT TERM 3659 2687534 - 2687508 - R 71 -10.1 -2.75795 | gap 1, opp_overlap 2687505 2687502 2687501, overlap 2687506 TTGAAAAAAGAAACG CCCCGG-TGAGC GGCT GCTCGTCCGGGG GCGCTGCATTGTACA ndk 2688029 - 2687598 - | multifunctional nucleoside diphosphate kinase and apyrimidinic endonuclease and 3'-phosphodiesterase pbpC 2690490 - 2688178 - | fused transglycosylase ; transpeptidase TERM 3660 2688564 - 2688580 + g 76 -8 -4.25104 | opp_overlap 2688563 CCTGAGGGCAATCAG CGGCAA CACGT TTGCCG TTTTCATCCAGCCAG TERM 3661 2689466 - 2689453 - G 70 -3.8 -4.60949 | overlap 2689449 CAGACCATAAACAAA CGGT TTGAGC ACCG ATCCTGGCGATCGGA TERM 3662 2690128 - 2690112 - G 70 -10.1 -3.21099 | TGGGGTGAGGATCAA GCAGGCG CGC CACCTGC ATGGTGAGCGTGCTG TERM 3663 2690339 - 2690327 - G 71 -9.1 -3.56092 | TCAGCATCGGCGAAA CGCCA GAG TGGCG TACCATCCTGCGCCA TERM 3664 2690471 - 2690438 - G 82 -8 -4.51699 | opp_overlap 2690440 2690463 2690464, overlap 2690439 2690440 AGAATGATGATAAAA GGCGCGGCTGCCAG CATTAT CCAGCAGCCGCGTT TGGTTAACAGGCGAG TERM 3665 2690470 - 2690439 - G 80 -11.5 -3.29935 | opp_overlap 2690440 2690463 2690464, overlap 2690438 2690440 GAATGATGATAAAAG GCGCGGCTGCCAG CATTAT CCAGCAGCCGCGT TTGGTTAACAGGCGA TERM 3666 2690469 - 2690440 - G 90 -15 -2.57238 | opp_overlap 2690440 2690463 2690464, overlap 2690439 2690438 AATGATGATAAAAGG CGCGGCTGCCAG CATTAT CCAGCAGCCGCG TTTGGTTAACAGGCG TERM 3667 2690440 - 2690469 + g 86 -10.6 -3.90112 | opp_overlap 2690439 2690438 2690440, overlap 2690463 2690464 AATGATGATAAAAGG CGCGGCTGCCAG CATTAT CCAGCAGCCGCG TTTGGTTAACAGGCG yfhM 2695452 - 2690491 - | hypothetical protein TERM 3668 2690766 - 2690776 + g 72 -6.8 -4.19238 | overlap 2690750 2690749 TGGCGCTGCCGTTCG CCAG ATT CTGG TTTTCCAGTTCCAGC TERM 3669 2691476 - 2691489 + g 84 -8.1 -4.72272 | CAGATTTCACGCAGC GCACC CAGT GGTGC TTTTTGCTGACGGGC TERM 3670 2693028 - 2692986 - G 74 -10.9 -3.27408 | gap 2, overlap 2692984 GCGTACTTAAATACA GATCATGACGATTCCAGGT TTTATCG ACC-GGAATCGTCA-GATC CAGCCCTTGAGCCGG TERM 3671 2694386 - 2694406 + g 79 -3.9 -5.09245 | GTCCGACCGTTTTTA CGCGCCA GCAGTAA TGCCGCG TTTTTATCATTTTCC sseA 2695659 - 2696504 + | 3-mercaptopyruvate sulfurtransferase TERM 3672 2696513 - 2696556 + T 100 -18.4 -2.90194 | opp_overlap 2696505 2696520 2696527, overlap 2696516 2696520 2696527 AAAATAAGCTTTTTA CAGGCAATAAAAAACCGCCG AATC TGGCGGTTTTTTATTGCTGG TCTGGTTCGCGGCCT TERM 3673 2696516 - 2696553 + T 100 -20.9 -2.69964 | opp_overlap 2696505 2696520 2696527, overlap 2696513 2696520 2696527 ATAAGCTTTTTACAG GCAATAAAAAACCGCCG AATC TGGCGGTTTTTTATTGC TGGTCTGGTTCGCGG TERM 3674 2696520 - 2696549 + T 95 -14.5 -3.26433 | opp_overlap 2696505 2696520 2696527, overlap 2696516 2696513 2696527 GCTTTTTACAGGCAA TAAAAAACCGCCG AATC TGGCGGTTTTTTA TTGCTGGTCTGGTTC TERM 3675 2696549 - 2696520 - T 87 -13.8 -3.12351 | opp_overlap 2696520 2696516 2696513 2696527, overlap 2696505 2696527 GCTTTTTACAGGCAA TAAAAAACCGCC GAATCT GGCGGTTTTTTA TTGCTGGTCTGGTTC TERM 3676 2696527 - 2696542 + T 100 -8.2 -5.52023 | opp_overlap 2696520 2696527, overlap 2696520 2696516 2696513 ACAGGCAATAAAAAA CCGCCG AATC TGGCGG TTTTTTATTGCTGGT TERM 3677 2696542 - 2696527 - T 100 -7.5 -5.49234 | opp_overlap 2696527 2696520 2696516 2696513, overlap 2696520 ACAGGCAATAAAAAA CCGCC GAATCT GGCGG TTTTTTATTGCTGGT TERM 3678 2696634 - 2696665 + T 80 -9 -4.10144 | opp_overlap 2696624 2696637, overlap 2696637 CACAATACTCGCCAG TAACTCTCTTTT TGTCAAGT AAAAGAGAGTTA TTATTGTTCTGTTAG TERM 3679 2696922 - 2696908 - T 91 -11.4 -4.10744 | CGAGGTAAATAATAA CCGGAG TCT CTCCGG CAACAATTTACTGGT TERM 3680 2696971 - 2696994 + T 100 -12.4 -4.3208 | opp_overlap 2696966, overlap 2696973 CAGCAAGTAAGCCCG AATGCCGCCC TTTG GGGCGGCATG TTTTAAATTATCCGG TERM 3681 2696973 - 2696992 + T 100 -15 -3.76167 | opp_overlap 2696966, overlap 2696971 GCAAGTAAGCCCGAA TGCCGCCC TTTG GGGCGGCA TGTTTTAAATTATCC sseB 2697773 - 2696997 - | rhodanase-like enzyme, sulfur transfer from thiosulfate TERM 3682 2697502 - 2697531 + g 83 -13 -3.02263 | opp_overlap 2697499, overlap 2697506 ATCTCAAACAATGTG CGAACGGGCATT ACGACA AATGCCTGTTCG TCTTCAACCGCCTGT TERM 3683 2697874 - 2697909 + r 88 -11.8 -3.51976 | opp_overlap 2697886, overlap 2697870 2697877 GATTTTCGCAATTTG TAGGCCGGATAAGGCG TTTA CGCCGCATCCGGCATA TTAGTTTACGCCGTT TERM 3684 2697877 - 2697906 + r 86 -13.5 -2.59569 | opp_overlap 2697886, overlap 2697874 2697870 TTTCGCAATTTGTAG GCCGGATAAGGCG TTTA CGCCGCATCCGGC ATATTAGTTTACGCC pepB 2699198 - 2697915 - | aminopeptidase B TERM 3685 2699251 - 2699230 - R 100 -13.7 -4.4261 | opp_overlap 2699230 2699226 CGTTTAACAGCAAAA CGGGCTACC CCCA GGCAGCCCG TTCATTTACTCGGCC TERM 3686 2699230 - 2699251 + r 85 -11.5 -3.56704 | opp_overlap 2699230, overlap 2699226 CGTTTAACAGCAAAA CGGGCTACC CCCA GGCAGCCCG TTCATTTACTCGGCC yfhJ 2699457 - 2699257 - | hypothetical protein fdx 2699804 - 2699469 - | [2Fe-2S] ferredoxin hscA 2701656 - 2699806 - | DnaK-like molecular chaperone specific for IscU TERM 3687 2701137 - 2701149 + g 76 -9.1 -3.74693 | CATGCAACCCCGCCA GACGC GCC GCGTC TTTGGTGCCCTGACG hscB 2702188 - 2701673 - | DnaJ-like molecular chaperone specific for IscU TERM 3688 2702268 - 2702242 - R 89 -8.7 -4.6951 | gap 1, opp_overlap 2702242 ATCAGGTAAAACAAA CCCCACGCGCAG GCGA CCACG-GTGGGG TTATCGGTATGCGCA iscA 2702607 - 2702284 - | FeS cluster assembly protein iscU 2703010 - 2702624 - | scaffold protein iscS 2704252 - 2703038 - | cysteine desulfurase (tRNA sulfurtransferase), PLP-dependent iscR 2704852 - 2704364 - | DNA-binding transcriptional repressor TERM 3689 2704748 - 2704738 - G 75 -6.8 -4.38927 | GTTCCAGATAAGAAA GGGA AAT TCCC TGACGTTCGGAAATA TERM 3690 2704875 - 2704887 + r 100 -6.2 -5.55769 | TTCACCTCAAACTCG CCCC TGCCC GGGG TTTTTTATTGTAAAA TERM 3691 2704937 - 2704984 + r 72 -8.6 -3.6715 | overlap 2704939 GGGTCAAGTCTGACA TTCCCGAGTAAATTGGTCAACT ATTT ACTTGACTGATTTAGTCGGGTA TTTAACCTTCAGTGC TERM 3692 2704939 - 2704982 + r 83 -11.2 -3.4149 | overlap 2704937 GTCAAGTCTGACATT CCCGAGTAAATTGGTCAACT ATTT ACTTGACTGATTTAGTCGGG TATTTAACCTTCAGT yfhQ 2705862 - 2705122 - | putative methyltransferase TERM 3693 2705749 - 2705780 + g 70 -6 -4.25256 | gap 1, overlap 2705749 GTCTGGTTTCACTAG T-GGATTAACCAGCC ACA GATTGGTTAATCCCA TTGTTTTCATGGCAC TERM 3694 2705999 - 2706027 + G 79 -12.3 -3.02166 | opp_overlap 2706000, overlap 2705995 CATCCGATGCTGAAC ATCGCCGTGCGCG CAG CGCGCAAGGCGGG TAATTTAATTGCCAA TERM 3695 2706026 - 2706000 - g 87 -13.6 -3.04263 | opp_overlap 2705999 2705995 ATCCGATGCTGAACA TCGCCGTGCGCG CAG CGCGCAAGGCGG GTAATTTAATTGCCA suhB 2705981 - 2706784 + | inositol monophosphatase yfhR 2706902 - 2707783 + | putative peptidase csiE 2707974 - 2709254 + | stationary phase inducible protein hcaT 2710385 - 2709246 - | putative 3-phenylpropionic transporter TERM 3696 2709526 - 2709510 - G 70 -10.1 -3.23216 | opp_overlap 2709510 2709513 TTGCACCACTATCAA CCACGGC AAC GCCGTAG TTGCTCCCATAATGC TERM 3697 2709791 - 2709768 - G 72 -7.4 -3.9009 | overlap 2709769 2709790 AACGCAGGCCAGAAA GCGCCAGTTC TGGC GAACCAACGC CAACCACGCAGACCA yphA 2710709 - 2711176 + | conserved hypothetical protein; putative inner membrane protein TERM 3698 2711214 - 2711183 - T 77 -10 -3.44848 | opp_overlap 2711193, overlap 2711181 2711184 2711201 CGGCGTTAGGAAAGA TGCCGGATGCGGCG TAAA CGCCTTATCCGGCC TACCGCTCCAACACC TERM 3699 2711213 - 2711184 - T 86 -13.5 -2.66695 | opp_overlap 2711193, overlap 2711183 2711181 2711201 GGCGTTAGGAAAGAT GCCGGATGCGGCG TAAA CGCCTTATCCGGC CTACCGCTCCAACAC yphB 2712208 - 2711336 - | hypothetical protein yphC 2713281 - 2712220 - | putative oxidoreductase, Zn-dependent and NAD(P)-binding TERM 3700 2712913 - 2712924 + g 75 -7.2 -4.41047 | GCCGTCACGCTGCCA GCCG TAAG CGGC TTTTCCTTCACCGGT yphD 2714345 - 2713347 - | putative sugar transporter subunit: membrane component of ABC superfamily TERM 3701 2714094 - 2714083 - G 76 -3.6 -4.92385 | CACACTGAAACAAAA GCCA CCAT CGGC CCAACGCTGACATCA yphE 2715881 - 2714370 - | fused putative sugar transporter subunits of ABC superfamily: ATP-binding components TERM 3702 2714834 - 2714847 + g 70 -5.2 -4.41548 | overlap 2714821 ACCAGGGAATGATCC CCGC TTCTTT GCGG TTTTCTGGCGTATAG yphF 2716887 - 2715904 - | putative sugar transporter subunit: periplasmic-binding component of ABC superfamily TERM 3703 2716440 - 2716452 + g 77 -3.3 -5.03145 | TAAAATAATCGGCGG CTGCG TTA CCCAG TTTTTTACCAAATTC yphG 2720265 - 2716984 - | hypothetical protein TERM 3704 2718661 - 2718673 + g 95 -9.1 -5.06414 | AATCAAACTCGCCTG TCCGC ACT GCGGA TTTTTGTTCAGCGCA yphH 2720383 - 2721576 + | putative DNA-binding transcriptional regulator TERM 3705 2721613 - 2721596 - T 91 -11.3 -4.00066 | opp_overlap 2721596 GCGATAACGTAGAAA GGCTTCC CGAA GGAAGCC TTTTTTCAACAGATT TERM 3706 2721596 - 2721613 + T 100 -11.3 -5.01732 | opp_overlap 2721596 GCGATAACGTAGAAA GGCTTCC CGAA GGAAGCC TTTTTTCAACAGATT glyA 2722893 - 2721640 - | serine hydroxymethyltransferase TERM 3707 2722379 - 2722395 + g 70 -5.1 -4.40333 | opp_overlap 2722379 TATGCAGAGAAGCCA CCGATAA TCA TTTTCGG TTTGTGTTCTTTGGC TERM 3708 2723663 - 2723647 - g 72 -5.7 -4.50661 | opp_overlap 2723649, overlap 2723649 AATCTATAACGAAAA CGCCAGC AAA GCCGGTG GTTGGGAAGGTACTC TERM 3709 2724387 - 2724373 - g 70 -5 -4.49756 | opp_overlap 2724373 CGTGAAACAGGAAAA CATTCA TTA CGAATG CTTTGGCCCGCATAA hmp 2723222 - 2724412 + | fused nitric oxide dioxygenase ; dihydropteridine reductase 2 glnB 2724795 - 2724457 - | regulatory protein P-II for glutamine synthetase yfhA 2726190 - 2724856 - | putative DNA-binding response regulator in two-component system yfhG 2726893 - 2726180 - | hypothetical protein yfhK 2728485 - 2727058 - | putative sensory kinase in two-component system TERM 3710 2727688 - 2727698 + g 93 -8.2 -4.90266 | overlap 2727673 GCCCTCGCGCATACT CGCC AGT GGCG TTTTTAATTCATGAG TERM 3711 2728573 - 2728543 - R 100 -16.3 -2.91681 | opp_overlap 2728546 2728550, overlap 2728546 2728550 GGGGAAGTTCAGATA CAACAAAGCCGGG AATTA CCCGGCTTTGTTA TGGAATAAGGCGGTG TERM 3712 2728570 - 2728546 - R 100 -15.8 -3.60412 | opp_overlap 2728546 2728550, overlap 2728543 2728550 GAAGTTCAGATACAA CAAAGCCGGG AATTA CCCGGCTTTG TTATGGAATAAGGCG TERM 3713 2728546 - 2728570 + r 100 -15.8 -3.32844 | opp_overlap 2728546 2728543 2728550, overlap 2728550 GAAGTTCAGATACAA CAAAGCCGGG AATTA CCCGGCTTTG TTATGGAATAAGGCG TERM 3714 2728566 - 2728550 - R 90 -10.8 -4.42974 | opp_overlap 2728550 2728546, overlap 2728546 2728543 TTCAGATACAACAAA GCCGGG AATTA CCCGGC TTTGTTATGGAATAA TERM 3715 2728550 - 2728566 + r 90 -10.8 -4.32177 | opp_overlap 2728546 2728543 2728550, overlap 2728546 TTCAGATACAACAAA GCCGGG AATTA CCCGGC TTTGTTATGGAATAA TERM 3716 2728982 - 2728965 - R 100 -8.4 -5.51046 | TAAAGACACAAAAAA GCTCCC GAAGTT GGGAGC TCATAATAGCGGTTG purL 2732948 - 2729061 - | phosphoribosylformyl-glycineamide synthetase TERM 3717 2731752 - 2731763 + g 74 -2.2 -5.14163 | overlap 2731746 2731745 CAGCTCTTCGCCATT GTGG CTGT TCAC TTTTTCTTCATAAGT TERM 3718 2733064 - 2733053 - H 73 -4.4 -4.86731 | TGCGTGGAAATAAAA TCAC CATC GTGA ATTAGCAACGCGTGC TERM 3719 2733227 - 2733217 - H 76 -2.6 -5.1848 | opp_overlap 2733217 AACTAATTGAAAAAA TTAA AGA TTAA TTATCTGTTCATCGG yfhD 2733346 - 2734764 + | putative transglycosylase tadA 2735297 - 2734761 - | tRNA-specific adenosine deaminase yfhB 2735957 - 2735322 - | hypothetical protein TERM 3720 2735588 - 2735573 - G 74 -6.1 -4.46112 | overlap 2735585 GCGTATCGAAATAAA CCGCT TCAACC AGCGG CTGCGGAGAGCCGGT TERM 3721 2735953 - 2735931 - G 86 -6.2 -5.16572 | overlap 2735934 2735936 ATCTAAGTCAAAAAA CACCACACGA CGC TCGTGAGTTG CCAAACCATACTCCT TERM 3722 2736903 - 2736871 - g 72 -7.7 -3.94877 | opp_overlap 2736889 ATTGCCGAAGAACAA GCGACAAACAGTGCT TCA ATCTCTGCTTGTCAC GCGCAGGGAATGTTA yfhH 2736166 - 2737014 + | fused putative DNA-binding transcriptional regulator; putative isomerase yfhL 2737070 - 2737330 + | ferredoxin (4Fe-4S cluster-containing protein) (fdx-like) TERM 3723 2737504 - 2737475 - T 100 -13.6 -3.78022 | opp_overlap 2737475 TTTATAGTTATTAAA GGCGCGTCCGAT TGGTTC ACCGGACGCACC TTAAGTACGTTTCCT ECS88_2735 2737765 - 2737601 - | hypothetical protein TERM 3724 2738008 - 2737958 - R 93 -13.5 -3.15405 | opp_overlap 2737965 2737971, overlap 2737965 TGCACAAAATTAAAG TTAAAAAGTAAAACCCCCGTTCC TTACC AGTTCGGGGGTTTTACTTTATAA AGAGAACGGTATTAT TERM 3725 2738001 - 2737965 - R 100 -11.6 -4.83759 | opp_overlap 2737965 2737971, overlap 2737958 AATTAAAGTTAAAAA GTAAAACCCCCGTTCC TTACC AGTTCGGGGGTTTTAC TTTATAAAGAGAACG TERM 3726 2737965 - 2738001 + r 85 -10.9 -3.85698 | opp_overlap 2737958 2737965, overlap 2737971 AATTAAAGTTAAAAA GTAAAACCCCCGTTC CTTACCA GTTCGGGGGTTTTAC TTTATAAAGAGAACG acpS 2738405 - 2738025 - | holo-[acyl-carrier-protein] synthase 1 pdxJ 2739136 - 2738405 - | pyridoxine 5'-phosphate synthase recO 2739876 - 2739148 - | gap repair protein TERM 3727 2739299 - 2739309 + g 72 -6.8 -4.21275 | overlap 2739281 2739280 TCAGGAAATTCCCGC GCGT TTA ACGC TTTTAACTGCCTTCC era 2740793 - 2739888 - | membrane-associated, 16S rRNA-binding GTPase TERM 3728 2740232 - 2740222 - G 75 -6.8 -4.41548 | TCAGACGCCATAAAA CGCT GTG AGCG ATCGGTGATGTAATC TERM 3729 2740701 - 2740712 + g 70 -5.8 -4.16284 | GGTGATGGAGATCTT CTGC CCCA GCAG TTTATTCAACAATGT rnc 2741470 - 2740790 - | RNase III TERM 3730 2741723 - 2741691 - R 100 -21.5 -4.07877 | opp_overlap 2741679 TTATCTCATAAATAA TTCACGTTGTCGCCA TAA CGGCGACAACGTGAA CGAAGATGGGCTATT lepB 2742711 - 2741737 - | leader peptidase (signal peptidase I) TERM 3731 2742273 - 2742289 + g 76 -9.5 -3.76373 | GCAAACCCACCGCGC GCTTGAT GTA ATCAAGC TTTGGATCTTCCGGA lepA 2744526 - 2742727 - | GTP-binding membrane protein TERM 3732 2742825 - 2742838 + g 74 -2.3 -5.07486 | overlap 2742823 TCTTACCTTCTTTCT GCTTC TGCA GCAGC TTTTTCTTACGACTG TERM 3733 2744731 - 2744714 - R 93 -11.3 -4.32607 | GCAAAATGCAACAAA GCCAGTG AAAT CACTGGC TCGCGTCTTCCGAAG rseC 2745203 - 2744724 - | RseC protein involved in reduction of the SoxR iron-sulfur cluster rseB 2746156 - 2745200 - | anti-sigma factor TERM 3734 2746097 - 2746070 - G 77 -10.4 -3.61715 | CATCTGCTGTAATAA CGCCCCGGACGC GGGA GTGGCCGAGGCG TTAGCAGAGAATAAC rseA 2746806 - 2746156 - | anti-sigma factor TERM 3735 2746532 - 2746544 + g 78 -7.7 -4.43189 | opp_overlap 2746540, overlap 2746540 CACGGACGTACTTTC TGCCA GAA TGGCA TTTTCTGCCATTGAT rpoE 2747414 - 2746839 - | RNA polymerase, sigma 24 (sigma E) factor TERM 3736 2747706 - 2747723 + H 71 -8.3 -3.47361 | overlap 2747704 AACTTCTCGTTTTCT CGCCGCC CTGA GGCAGCG TGTTTAGTCACTGTA TERM 3737 2747845 - 2747823 - g 84 -3.5 -5.20222 | opp_overlap 2747844 ATTAAACAAAGAAAA TGAATACTC TCCCT GAACATTCA TGTGACGTGTTGATT TERM 3738 2747969 - 2747989 + G 72 -8.9 -3.73775 | overlap 2747972 TCAACATTTTATGCC CAGGGCGGT ATT GCCGCCGTG TTTGATGAAACTGAC nadB 2747822 - 2749444 + | quinolinate synthase, L-aspartate oxidase (B protein) subunit TERM 3739 2749461 - 2749448 - T 74 -3.1 -5.1634 | gap 1 ATAAACAGATAAAAA GC-CTG GGT CAGCGC CGTATACGCTTCGGA yfiC 2750166 - 2749429 - | putative S-adenosyl-L-methionine-dependent methyltransferase TERM 3740 2749545 - 2749519 - G 88 -12.4 -3.58269 | overlap 2749543 TAAGCGATCGCTAAA GCATTCTCCC GCCTGCG GGGAGAATGC CAGCAGCACCCGATG TERM 3741 2750204 - 2750191 - H 74 -5.9 -4.7254 | ACCTTGCAGGAAAAA CGGCG ATAG CACCG GGTGAGAACAATACC TERM 3742 2750735 - 2750724 - g 72 -4.4 -4.67943 | CTGCAATACATAAAA GAAG AGAA CTTC GATTGCCGCGCGGTT srmB 2750298 - 2751632 + | ATP-dependent RNA helicase TERM 3743 2751636 - 2751661 + T 100 -15.5 -4.82901 | opp_overlap 2751634 2751627 ACAGAAGAGTAATCT CAATGCCGGGT TTAA GCCCGGCATTG TTTTTATCCCGGCAA yfiE 2752546 - 2751665 - | putative DNA-binding transcriptional regulator TERM 3744 2751863 - 2751831 - G 70 -6.1 -4.15565 | TTTACCACCGCAAAA CGCGGCAGGTAACTG ACT CCGATATTTGCCGCG ACACAACGCTTGATG TERM 3745 2752348 - 2752358 + g 79 -2.4 -5.26875 | TAAGTTCATAGATGT GCGG CAG CAGC TTTTTTCCTTCGCGG TERM 3746 2752460 - 2752474 + g 70 -5 -4.57569 | overlap 2752463 AAAAGTCACCGTCGA TTGTGT GCA GCACAA TTTTTGCGAAGCTCG TERM 3747 2752495 - 2752475 - G 80 -11.3 -3.40403 | TTGTGTGCAGCACAA TTTTTGCGA AGC TCGCAAAAA GGAACCCTCTTCCAC TERM 3748 2752577 - 2752594 + H 83 -2.7 -5.52909 | opp_overlap 2752578, overlap 2752578 2752593 GAAAATATCGAATTT AGAATGT AAAA ACATTCA TTTTTTTAAATGTTC yfiK 2752649 - 2753236 + | neutral amino-acid efflux system TERM 3749 2753213 - 2753225 + T 73 -4.8 -4.66537 | CTGTTGCTGGTCTAT TGCG CGGTA CGCA TTTTCTATTAACGAA TERM 3750 2753246 - 2753269 + T 100 -16.8 -3.22884 | opp_overlap 2753246, overlap 2753238 TATTAACGAAAAAAA GCGGAAGAGG TCGC CCTCTTCCGC TTAGTAACTTGCTAC TERM 3751 2753269 - 2753246 - T 100 -16.8 -5.65513 | opp_overlap 2753238 2753246 TATTAACGAAAAAAA GCGGAAGAGG TCGC CCTCTTCCGC TTAGTAACTTGCTAC yfiD 2753675 - 2753292 - | pyruvate formate lyase subunit TERM 3752 2753819 - 2753803 - H 79 -3.7 -5.24551 | TTAAATCAACAAAAA CCACA TATCAAG TGTGG TCACAAATGGATTTT TERM 3753 2754442 - 2754459 + G 88 -5.5 -5.18726 | AGCCTCATAAATCAG CATCGCG AAGG CGTGGTG TTTTTGTTGTGGGGA ung 2753980 - 2754669 + | uracil-DNA-glycosylase TERM 3754 2754710 - 2754683 - T 100 -13.4 -4.0896 | opp_overlap 2754681 2754684 2754707 2754709, overlap 2754684 AAATTTGCGGGAAAA TGCCGGATGGCA GAGT TGCCACCCGGCT GATTTATCAGGCTTT TERM 3755 2754684 - 2754709 + T 89 -14.7 -3.0169 | opp_overlap 2754684 2754683, overlap 2754681 2754707 AATTTGCGGGAAAAT GCCGGATGGCA GAGT TGCCACCCGGC TGATTTATCAGGCTT TERM 3756 2754709 - 2754684 - T 100 -16.9 -3.04894 | opp_overlap 2754681 2754684 2754707, overlap 2754683 AATTTGCGGGAAAAT GCCGGATGGCA GAGT TGCCACCCGGC TGATTTATCAGGCTT yfiF 2755754 - 2754717 - | putative methyltransferase TERM 3757 2755553 - 2755541 - G 71 -9.1 -3.53012 | opp_overlap 2755521 CCGGCGCGCGGGAAA CCGTG CGC CACGG CGAATCTTCCCACTT ECS88_2756 2755947 - 2755744 - | conserved hypothetical protein, putative Z3866 protein trxC 2755961 - 2756380 + | thioredoxin 2 TERM 3758 2756387 - 2756407 + F 100 -14.7 -4.50976 | TCTCTTTAATCTTAC CGGGGCGCA TCT TGTGCCCCG TTTTCTCCTCTGCGA TERM 3759 2756491 - 2756507 + G 72 -4.3 -4.63218 | overlap 2756486 2756482 2756494 CGCGCCGAGCGTATT GCGCGTG CAA CACGTCC TTTTCTTGCCCGCGG TERM 3760 2756662 - 2756646 - g 72 -10.1 -3.3782 | opp_overlap 2756645 2756643 CACCGAGCCAATGAA GCCCAGT AAT ACCGGGC GTCTGATTGCTGATA yfiP 2756449 - 2757147 + | hypothetical protein yfiQ 2757179 - 2759839 + | fused acyl-CoA synthetase: NAD(P)-binding subunit ; ATP-binding subunit pssA 2759953 - 2761308 + | phosphatidylserine synthase (CDP-diacylglycerol-serine O-phosphatidyltransferase) TERM 3761 2761315 - 2761331 + F 93 -9.4 -5.04249 | opp_overlap 2761315 ATCCTGTAATCACAA CCCCGT CCTGT ACGGGG TTTGTTTTTTGGAGG TERM 3762 2761331 - 2761315 - f 75 -9.4 -3.51032 | opp_overlap 2761315 ATCCTGTAATCACAA CCCCGT CCTGT ACGGGG TTTGTTTTTTGGAGG yfiM 2761405 - 2761677 + | hypothetical protein kgtP 2762972 - 2761674 - | alpha-ketoglutarate transporter ECS88_2763 2763366 - 2764907 + | transposase for insertion sequence IS408 family (ORFA) ECS88_2764 2764919 - 2765668 + | transposase for insertion sequence IS408 family, putative ATP-binding protein (ORFB) TERM 3763 2765708 - 2765683 - T 76 -5.5 -4.75776 | gap 1, overlap 2765706 2765707 AAGGTAATTTAAAAA CGGTTC-TGTGA AAG TGACACGAACCG ATCTCCATCGATGTT TERM 3764 2765860 - 2765877 + T 100 -12.7 -4.02571 | opp_overlap 2765860 2765862 CAGGCATGCCAGACA CAGCGCC GTCA GGCGCTG TTGTTTCATCCCTTC TERM 3765 2765877 - 2765860 - T 82 -12.7 -2.89881 | opp_overlap 2765860, overlap 2765862 CAGGCATGCCAGACA CAGCGCC GTCA GGCGCTG TTGTTTCATCCCTTC TERM 3766 2765875 - 2765862 - T 71 -9.5 -3.00022 | opp_overlap 2765860, overlap 2765860 GGCATGCCAGACACA GCGCC GTCA GGCGC TGTTGTTTCATCCCT TERM 3767 2767115 - 2767170 + T 77 -3.2 -5.22104 | gap 1, opp_overlap 2767115, overlap 2767115 2767116 2767118 GACAGTTTCAGTTAA C-CGGCTTTTTGATACTCAGTCCGGTA TTC TACCGGGCTGAGTCCCCCAAGACTGAG TTTTATTCTTTTTTG ECS88_2768 2767833 - 2767111 - | transposase ORF B, IS3 family, IS150 group TERM 3768 2767657 - 2767669 + g 73 -9.1 -3.6761 | overlap 2767655 GAGTCCCATATTTCC CCGGT AAG ACCGG TATTTCTTCAGGCGC TERM 3769 2767970 - 2767980 + r 77 -2.4 -5.40072 | overlap 2767965 TTCGTTTTTTCTCCA GCTC CTG GCGC TTTTTTTCCAGAAGA TERM 3770 2768550 - 2768573 + r 78 -11 -3.26998 | opp_overlap 2768552, overlap 2768544 2768552 CGCACCAACGCAAAA AAGCCCAGTC TTCC GACTGGGCTC TTCGCTTAATTTGAT TERM 3771 2768571 - 2768552 - R 100 -13.6 -5.17576 | opp_overlap 2768552 2768550 2768544 CACCAACGCAAAAAA GCCCAGTC TTCC GACTGGGC TCTTCGCTTAATTTG TERM 3772 2768552 - 2768571 + r 93 -13.6 -3.19205 | opp_overlap 2768552, overlap 2768550 2768544 CACCAACGCAAAAAA GCCCAGTC TTCC GACTGGGC TCTTCGCTTAATTTG TERM 3773 2769908 - 2769919 + r 71 -4.4 -4.7254 | CCACTTTCGTGTTTG CACA GTGC TGTG TTTTTAATAAACAGT TERM 3774 2771209 - 2771221 + r 70 -6.2 -4.2354 | AGGTTCTTTTTCACT CCCC TCGCC GGGG TTCTTTTCGCCTTTC TERM 3775 2771763 - 2771787 + r 72 -8 -3.93061 | gap 1, opp_overlap 2771769 AAAATTTGAGAGACT CAC-GAACAAC TCTC GTTGTTCAGTG TTTCAATTTTCAGCT TERM 3776 2771989 - 2772002 + r 74 -6.7 -4.41177 | overlap 2771954 GTATCAGTCTGCTTC GCAAG ACGC CTTGC TTTTCACTTTCTATC TERM 3777 2774017 - 2774033 + r 89 -9.4 -4.56607 | opp_overlap 2774017, overlap 2774012 ACTTATAGACAAAAA CGAGCC CCGAA GGCTCG TTTTATCATTACTGG TERM 3778 2774033 - 2774017 - R 93 -10.1 -5.04597 | opp_overlap 2774012 2774017 ACTTATAGACAAAAA CGAGCCC CGA AGGCTCG TTTTATCATTACTGG clpB 2776615 - 2774042 - | protein disaggregation chaperone TERM 3779 2775811 - 2775791 - G 72 -7.5 -3.86822 | opp_overlap 2775791 TAATTCGTCGATAAA CAGGATGAC GTT GCCTTCCTG TTTGGCAAGATCGTT yfiH 2777476 - 2776745 - | hypothetical protein rluD 2778453 - 2777473 - | 23S rRNA pseudouridine synthase TERM 3780 2778488 - 2778498 + H 72 -8.2 -3.8766 | ATCGTTGGGGTTTTA CGGC TTT GCCG TTTAATATAGTGTGC yfiO 2778588 - 2779325 + | putative lipoprotein TERM 3781 2779369 - 2779341 - f 93 -12.5 -3.44991 | opp_overlap 2779346, overlap 2779346 CAGAAACCTGAAACA CAAAACGGCAGCC TTG AGCTGCCGTTTTT TTATTCTGTTAGTTG TERM 3782 2779364 - 2779346 - f 100 -12.4 -4.79451 | opp_overlap 2779346, overlap 2779341 ACCTGAAACACAAAA CGGCAGCC TTG AGCTGCCG TTTTTTTATTCTGTT TERM 3783 2779346 - 2779364 + F 100 -11.7 -5.94214 | opp_overlap 2779346 2779341 ACCTGAAACACAAAA CGGCAGC CTTGA GCTGCCG TTTTTTTATTCTGTT TERM 3784 2779889 - 2779856 - g 72 -6.7 -4.1822 | gap 1, overlap 2779857 CGGCAGCTCAATAAA CTGCAGCACAAAG-GC GAA GCACGTCGTGCCGCAA CATCGGTGAAAGACG yfiA 2779595 - 2779936 + | cold shock protein associated with 30S ribosomal subunit TERM 3785 2779962 - 2779977 + F 100 -11.8 -5.4505 | TGAGTGTATCGCCAA CGCGCC TTCG GGCGCG TTTTTTGTTGACAGC pheL 2780040 - 2780087 + | pheA gene leader peptide TERM 3786 2780136 - 2780156 + F 100 -11.8 -5.5112 | opp_overlap 2780136 GAAGACGAACAATAA GGCCTCCC AAATC GGGGGGCC TTTTTTATTGATAAC TERM 3787 2780156 - 2780136 - f 82 -10.3 -4.03167 | opp_overlap 2780136 GAAGACGAACAATAA GGCCTCCCA AAT CGGGGGGCC TTTTTTATTGATAAC pheA 2780186 - 2781346 + | fused chorismate mutase P ; prephenate dehydratase TERM 3788 2781347 - 2781388 + T 72 -9.5 -3.17219 | opp_overlap 2781354, overlap 2781350 2781351 2781354 GTTGATCCAACCTGA TGAAAAAGTGCCGGATGAT GTGA ATCATCCGGCACTGGATTA TTACTGGCGATTGTC TERM 3789 2781350 - 2781385 + T 77 -9 -3.72592 | opp_overlap 2781354, overlap 2781347 2781351 2781354 GATCCAACCTGATGA AAAAGTGCCGGATGAT GTGA ATCATCCGGCACTGGA TTATTACTGGCGATT TERM 3790 2781351 - 2781384 + T 82 -12.5 -2.83073 | opp_overlap 2781354, overlap 2781350 2781347 2781354 ATCCAACCTGATGAA AAAGTGCCGGATGAT GTGA ATCATCCGGCACTGG ATTATTACTGGCGAT TERM 3791 2781354 - 2781381 + T 100 -18.6 -2.67428 | opp_overlap 2781354, overlap 2781351 2781350 2781347 CAACCTGATGAAAAA GTGCCGGATGAT GTGA ATCATCCGGCAC TGGATTATTACTGGC TERM 3792 2781381 - 2781354 - T 100 -18.6 -4.74801 | opp_overlap 2781354 2781351 2781350 2781347 CAACCTGATGAAAAA GTGCCGGATGAT GTGA ATCATCCGGCAC TGGATTATTACTGGC tyrA 2782510 - 2781389 - | fused chorismate mutase T ; prephenate dehydrogenase TERM 3793 2781684 - 2781698 + g 71 -2.8 -4.77165 | GAGAGCGCCAGTAGT TGCTCA AGC TGAACA TTTTCTTCTGCCAGG aroF 2783591 - 2782521 - | 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, tyrosine-repressible yfiL 2783801 - 2784166 + | hypothetical protein yfiR 2784315 - 2784833 + | hypothetical protein yfiN 2784823 - 2786049 + | putative diguanylate cyclase yfiB 2786065 - 2786547 + | putative outer membrane lipoprotein TERM 3794 2786593 - 2786572 - T 100 -11.5 -5.82281 | opp_overlap 2786572 2786590 2786592 AAACAGACAAAAAAA GGGCCAGCC AATT GGCCAGCCC TTCTTAACAGGATGT rplS 2786971 - 2786624 - | 50S ribosomal subunit protein L19 trmD 2787780 - 2787013 - | tRNA (guanine-1-)-methyltransferase rimM 2788359 - 2787811 - | 16S rRNA processing protein rpsP 2788626 - 2788378 - | 30S ribosomal subunit protein S16 TERM 3795 2788682 - 2788650 - R 90 -9.2 -4.63218 | gap 1, opp_overlap 2788653, overlap 2788653 CTTGTGTGAATAAAA CAACCGGACCCCATC GAGG AACGGAGTCCGG-TG TCATATTAAAAGCCC TERM 3796 2788680 - 2788653 - R 95 -12 -4.43307 | opp_overlap 2788653, overlap 2788650 GTGTGAATAAAACAA CCGGACCCCATC GAGG AACGGAGTCCGG TGTCATATTAAAAGC ffh 2790124 - 2788763 - | Signal Recognition Particle (SRP) component with 4.5S RNA (ffs) TERM 3797 2790385 - 2790371 - g 85 -2.7 -5.40072 | overlap 2790373 TCTGCTGCAAAAAAA CGGCG GCTGG CGGCG CATGGCTATTATTTC ypjD 2790216 - 2791082 + | conserved hypothetical protein; putative inner membrane protein yfjD 2791193 - 2792389 + | conserved hypothetical protein; putative inner membrane protein TERM 3798 2792393 - 2792424 + T 86 -10.8 -4.15044 | opp_overlap 2792396, overlap 2792396 GTGGCGGAGTAACGA AAACGGCCCGGCAT TCGC ATGCTGGGCCGTGA TTTATTACGAAAGCA TERM 3799 2792396 - 2792421 + T 100 -16.9 -3.10244 | opp_overlap 2792396, overlap 2792393 GCGGAGTAACGAAAA CGGCCCGGCAT TCGC ATGCTGGGCCG TGATTTATTACGAAA TERM 3800 2792421 - 2792396 - T 100 -14.7 -4.45544 | opp_overlap 2792393 2792396 GCGGAGTAACGAAAA CGGCCCGGCAT TCGC ATGCTGGGCCG TGATTTATTACGAAA grpE 2793037 - 2792444 - | heat shock protein yfjB 2793160 - 2794038 + | NAD kinase TERM 3801 2794129 - 2794119 - f 70 -5.4 -4.39166 | TTTCATACAGGAAAA CAAC TAT GTTG GCACAACTGACCATC TERM 3802 2795719 - 2795696 - g 79 -2.2 -5.24129 | TCCCTGGATAAAAAA GCGCGGTTAC AAGA GTTGGCGCGC CTGCTTGGTGGCAGT recN 2794124 - 2795785 + | recombination and repair protein smpA 2795934 - 2796275 + | small membrane lipoprotein TERM 3803 2796295 - 2796334 + T 95 -12.4 -3.70444 | gap 1, opp_overlap 2796307, overlap 2796307 AAAGTTGCTCTCAAA GACGTTAAAAAAGGTGCTC AAT GAGCACCTTTTTTC-TGTC TGTTATTTATTCGCT TERM 3804 2796323 - 2796307 - T 100 -12.3 -5.10077 | opp_overlap 2796295 2796307 AAAGACGTTAAAAAA GGTGCTC AAT GAGCACC TTTTTTCTGTCTGTT TERM 3805 2796307 - 2796323 + T 100 -12.3 -5.46276 | opp_overlap 2796307, overlap 2796295 AAAGACGTTAAAAAA GGTGCTC AAT GAGCACC TTTTTTCTGTCTGTT yfjF 2796627 - 2796337 - | hypothetical protein TERM 3806 2796453 - 2796471 + g 74 -3 -4.96773 | overlap 2796455 CGCTGAGTTTTGCCG GACGGC TGTAAAT GCCGAC TTTGTTTTTAGTTAA yfjG 2797093 - 2796617 - | hypothetical protein TERM 3807 2797616 - 2797604 - g 70 -5.5 -4.35524 | GGTGCAAAGTGAAAA TCGGC GTC GCCAA AGGTAAGAAACAGCA smpB 2797225 - 2797707 + | trans-translation protein TERM 3808 2798021 - 2798006 - f 74 -3.2 -5.08011 | overlap 2798008 AAAAGCCGCAAAAAA TAGTCG CAAA CGACGA AAACTACGCTTTAGC TERM 3809 2798295 - 2798318 + F 100 -11 -5.34309 | opp_overlap 2798291 2798295 CACCAAATAAATCAA GGGGTTACGT AAAA GCGTAGCCCC TTTTTCTTTGGTAGT TERM 3810 2798318 - 2798295 - f 71 -8.1 -3.77491 | opp_overlap 2798295, overlap 2798291 CACCAAATAAATCAA GGGGTTACG TAAAAG CGTAGCCCC TTTTTCTTTGGTAGT ECS88_2808 2798408 - 2798890 + | hypothetical protein TERM 3811 2798894 - 2798907 + T 72 -8.1 -3.89695 | opp_overlap 2798894 CCAGATGAATAAAAA CCTGC CGTA GCAGG TTCTCTTTCTCAAAA TERM 3812 2798907 - 2798894 - T 87 -8.1 -5.16841 | opp_overlap 2798894 CCAGATGAATAAAAA CCTGC CGTA GCAGG TTCTCTTTCTCAAAA D 2800304 - 2799204 - | Late control gene D protein (GpD) TERM 3813 2799385 - 2799430 + g 78 -8.3 -4.18762 | gap 1, opp_overlap 2799399 2799404 CGCCCTTCCGCCAGT TGTAGCGAGAATGAC-GCAACG CCG CGTTGCAGGCGTTCCCACTGCA TTTTCGCTGCCCGTT U 2800786 - 2800301 - | bacteriophage tail protein GpU TERM 3814 2800656 - 2800624 - G 76 -9.1 -3.78934 | opp_overlap 2800634, overlap 2800626 TTTCCGGCATAAGAA CACCGGAAAGCGTCA GCA TGTCGTTTTCCGGTC CCAGAAACTGCGTGG TERM 3815 2800654 - 2800626 - G 82 -11.7 -3.4811 | opp_overlap 2800634, overlap 2800624 TCCGGCATAAGAACA CCGGAAAGCGTCA GCA TGTCGTTTTCCGG TCCCAGAAACTGCGT ECS88_2811 2803860 - 2800783 - | putative phage tail tape measure protein TERM 3816 2801110 - 2801134 + g 83 -9.9 -4.07885 | GCTGGTCACATTTGC CGGGCCGTTAA CAA TTTCCGGCCCG TTTTCACCGACGATG TERM 3817 2803509 - 2803519 + g 71 -2.4 -4.88388 | opp_overlap 2803500, overlap 2803507 GCACAAGCGCCGTCT GCCG CTG CAGC TTTTTCTGGCGTTCT TERM 3818 2803786 - 2803760 - G 73 -11.7 -2.62396 | gap 1 GATTTTTTGACAGCA GCA-GCCAGTTC TCTT GAACTGGCCTGC GCAGATCGAAATGGG ECS88_2812 2803972 - 2803853 - | putative phage tail protein TERM 3819 2803974 - 2803954 - G 88 -8.3 -4.65895 | GCGGCCAGTGAAAAA TGGTGGC GATATCT GCCACCA GATCGTCAACCGTCA ECS88_2813 2804289 - 2803987 - | putative phage tail protein E fII 2804859 - 2804344 - | Major tail tube protein (Protein FII) fI 2806041 - 2804869 - | Major tail sheath protein (Protein FI) TERM 3820 2806169 - 2806152 - R 91 -8.3 -5.0133 | overlap 2806139 2806153 GACGGGGCGAAAAAA TCCCCGC AGGC GCGGGGC AGGAATTTAAATTTC TERM 3821 2806168 - 2806153 - R 89 -11.8 -3.60316 | overlap 2806139 2806152 ACGGGGCGAAAAAAT CCCCGC AGGC GCGGGG CAGGAATTTAAATTT tfaE 2806778 - 2806176 - | Phage tail assembly chaperone ECS88_2817 2808403 - 2806778 - | putative variable tail fiber protein TERM 3822 2807599 - 2807641 + g 75 -4.7 -4.84359 | gap 1, overlap 2807601 ACTGCGCCGCCGTGG GAGCTGTTGGCG-TTCCGGT GAGT GCCGGACTCGACAGCGGCGC TTTTTGTGCCAGTGC I 2809005 - 2808400 - | Tail protein I (GpI) J 2809945 - 2808998 - | Baseplate assembly protein J (GpJ) W 2810252 - 2809893 - | Baseplate assembly protein W (GpW) V 2810827 - 2810249 - | Baseplate assembly protein V (GpV) TERM 3823 2810693 - 2810709 + g 74 -8.7 -3.92373 | overlap 2810684 GGCACGCAGGGTCAG CCAGCTG ATC CAGTTGG TTTCTAAGTCGCCTG TERM 3824 2811013 - 2810997 - g 79 -3.7 -5.10163 | AACTGCAAAATAAAA CTTCCCT GTT AGAAAAG TACGGGACTAGTAAC TERM 3825 2811537 - 2811491 - g 70 -4.1 -4.59511 | gap 2, overlap 2811492 AATAGTCTTGAAAAA TTGTATATTGCGCTATCACAACA AAT TGTTGTGACTG-ACAATATA-AA GTTCAATGGCGAACT TERM 3826 2811890 - 2811878 - g 77 -2.7 -5.09685 | opp_overlap 2811884 CAAGATATACAAAAA TTAGA TGG CCTAA AAGTCCTTTGTAAGG ECS88_2822 2810966 - 2812666 + | hypothetical protein TERM 3827 2812660 - 2812704 + T 90 -9.3 -4.80882 | opp_overlap 2812671, overlap 2812664 2812671 TCTTTCAAATCACCT TGAATAAATAACGGGTGGCCT CCT AGGCCACCCGTTCATAACTTA TTTTTAATCTAAAAT TERM 3828 2812664 - 2812700 + T 90 -12.3 -3.29508 | opp_overlap 2812671, overlap 2812660 2812671 TCAAATCACCTTGAA TAAATAACGGGTGGCCT CCT AGGCCACCCGTTCATAA CTTATTTTTAATCTA TERM 3829 2812671 - 2812693 + T 100 -19.2 -3.26842 | opp_overlap 2812671, overlap 2812664 2812660 ACCTTGAATAAATAA CGGGTGGCCT CCT AGGCCACCCG TTCATAACTTATTTT TERM 3830 2812693 - 2812671 - T 100 -19.2 -4.20768 | opp_overlap 2812671 2812664 2812660 ACCTTGAATAAATAA CGGGTGGCCT CCT AGGCCACCCG TTCATAACTTATTTT ECS88_2823 2813180 - 2812722 - | putative phage tail completion protein TERM 3831 2812892 - 2812943 + g 77 -6.7 -4.46212 | gap 1, opp_overlap 2812902 CAATGCGCTGTACCT TACCTTCAAACTGCACGCTGGC AGAGTCGGC GCTGGCG-GCAGTTTTCAGGTA TTTTGTGGTGCGCAG R 2813625 - 2813173 - | Tail completion protein R (GpR) TERM 3832 2813339 - 2813319 - GR 71 -9.1 -3.28924 | opp_overlap 2813318 2813321 CATCGTTGCGCAGAA TATCCACCT CAA AGGTGAATA GCTTTTCCCGTAACG ECS88_2825 2813857 - 2813567 - | Conserved hypothetical protein from phage ECS88_2826 2814128 - 2813700 - | putative Regulatory protein TERM 3833 2813995 - 2814007 + gr 86 -9.1 -4.3467 | opp_overlap 2813979 TGGCTATTGCTCTTT GCCAG TGC CTGGC TTTTGCTCTGCAGCT ECS88_2827 2814574 - 2814125 - | hypothetical protein R 2815016 - 2814504 - | putative lysozyme protein R of prophage ECS88_2829 2815212 - 2814997 - | putative secretory protein X 2815419 - 2815216 - | Phage tail protein X (GpX) L 2815946 - 2815419 - | Head completion/stabilization protein (GpL) TERM 3834 2815949 - 2815973 + r 100 -13.6 -3.48593 | gap 1 TGCCTTTCGCCACCC CGTGCCGCCCG TGCG CGGG-GGCACG TTCTGTCAGCGGCTG M 2816629 - 2815979 - | Terminase, endonuclease subunit (GpM) TERM 3835 2816560 - 2816579 + g 72 -10.6 -3.04144 | ACGCGTGGCGAACGC TGCCGCCC TCGC GGGCGGCC TGTTCAGCCTGAACG N 2817691 - 2816633 - | minor capsid protein H1 and H2, major capsid protein N* TERM 3836 2816897 - 2816923 + g 90 -8 -4.80396 | overlap 2816921 GCCACCCATGCGTTT CTGACTGATGAT CAT ATCAGCAGCCAG TTTTTCACTGTTTTC TERM 3837 2817199 - 2817212 + g 70 -5.9 -4.19704 | AGCCTTTGTTCACAT CCTGC AGCA GCGGG TTTTCGCTACGGTTG O 2818541 - 2817708 - | Presumed capsid scaffolding protein (GpO) TERM 3838 2817953 - 2817971 + g 77 -3.1 -5.14563 | gap 1 GCACATCAGAGAACC GGGC-GTC ATCG GACTGCTC TTTTTTGGTAAACAG P 2818684 - 2820450 + | Terminase, ATPase subunit (GpP) TERM 3839 2820480 - 2820470 - g 77 -8.2 -4.04071 | overlap 2820471 AAAGAGTAAGAAGAA CCGC GCT GCGG CGACGAAACAGATCC TERM 3840 2820536 - 2820516 - g 79 -12.6 -3.05455 | AAAAGTCAAACTACA GCCGAAGC ATTCA GCTTCGGC GATCCCGTTCCTGTT TERM 3841 2821452 - 2821442 - g 74 -2.6 -5.03314 | TTTATGGCTAAAAAA TAAT ATT ATTA CATTCAAAGAATATC ECS88_2836 2820447 - 2821484 + | putative phage portal protein TERM 3842 2821511 - 2821489 - T 100 -15 -3.43071 | opp_overlap 2821495, overlap 2821492 CCCTAGACTAATTAA TAACCACCTC TAT GAGGTGGTTA ACAAGAATAAACCTA TERM 3843 2821508 - 2821492 - T 100 -12.3 -3.84915 | opp_overlap 2821495, overlap 2821489 TAGACTAATTAATAA CCACCTC TAT GAGGTGG TTAACAAGAATAAAC ECS88_2837 2822941 - 2821532 - | hypothetical protein TERM 3844 2823127 - 2823108 - R 100 -15 -4.20084 | ATGATCTACGCAAAA GCCCGCCA GTTC TGGCGGGC CTTAGCAAAAACGAT ECS88_2838 2823568 - 2823263 - | putative DinI-like damage-inducible protein ECS88_2839 2823797 - 2823507 - | hypothetical protein ECS88_2840 2824205 - 2823849 - | conserved hypothetical protein of phage origin (partial) ECS88_2841 2826289 - 2824202 - | putative bacteriophage replication gene A protein (endonuclease) TERM 3845 2825177 - 2825164 - G 72 -5.9 -4.37886 | opp_overlap 2825165 2825166, overlap 2825165 2825166 TGATGGTGTAGAAAA CGGCG CAGT CACCG CGCATTTCCGCGATA TERM 3846 2826190 - 2826172 - G 74 -8.8 -3.95219 | overlap 2826163 2826164 TTGAAAGCGCAGAAA CCGGCG CGACTTC CGCCGG GTCCAGATAAGGGTT dam 2827203 - 2826286 - | Site-specific DNA-methyltransferase (adenine-specific) TERM 3847 2826677 - 2826687 + gr 77 -8.2 -4.04206 | GCGCATATAAACGTT GCCC GCT GGGC TTTCTCTGCAAATGC ECS88_2843 2827367 - 2827140 - | putative DksA/TraR protein family with a zinc finger ECS88_2844 2827606 - 2827367 - | hypothetical protein ECS88_2845 2828009 - 2827668 - | hypothetical protein ECS88_2846 2828256 - 2828032 - | hypothetical protein fil 2828453 - 2828127 - | conserved hypothetical protein fil of phage origin cII 2828940 - 2828431 - | regulatory protein cII ECS88_2849 2829215 - 2828973 - | putative phage regulatory protein TERM 3848 2829053 - 2829065 + g 82 -2.6 -5.36181 | ACATCAGATAACGAA GGCT TACGC GGCC TTTATTTTTTTCTTT cI 2829337 - 2829969 + | phage regulatory protein cI int 2829972 - 2830991 + | Integrase ECS88_2852 2830996 - 2832219 + | hypothetical protein TERM 3849 2832497 - 2832484 - f 71 -8.1 -3.75832 | AAAAGGATACGCAAA GGAGC CGCG GCTCC GAAGTGAAATGAAAG TERM 3850 2832512 - 2832527 + F 100 -11.8 -5.39221 | opp_overlap 2832512 CGAAGTGAAATGAAA GCCCGC TGAT GCGGGC TTTTTTGCTTCTTCT TERM 3851 2832527 - 2832512 - f 93 -11.8 -4.10672 | opp_overlap 2832512 CGAAGTGAAATGAAA GCCCGC TGAT GCGGGC TTTTTTGCTTCTTCT ECS88_2853 2832766 - 2832963 + | hypothetical protein TERM 3852 2833108 - 2833097 - g 93 -5.8 -5.19879 | TGGTAAATATAAAAA CTGG ATCG CCAG AGTGAAAAAGTTAAT ECS88_2854 2832960 - 2833748 + | hypothetical protein TERM 3853 2833781 - 2833831 + T 93 -11.9 -4.1043 | gap 1, opp_overlap 2833813 TTACAGGATTAGGTT TGCGGCCGTGCCAGCAGGAC GAGCATGAAAAA GGCC-GCTGGCACGGCCGGA TTTGTCATCTTTGCC TERM 3854 2833828 - 2833813 - T 86 -8.2 -4.78107 | opp_overlap 2833781 GACGAGCATGAAAAA GGCCGC TGGC ACGGCC GGATTTGTCATCTTT ECS88_2855 2834129 - 2833836 - | hypothetical protein ECS88_2856 2834332 - 2834186 - | hypothetical protein TERM 3855 2834284 - 2834265 - G 70 -5.6 -4.38154 | opp_overlap 2834265 AGACTTTGCACAAAA GAGCCAAC TATC GCGGGCTC TCTCTCATCATGTGC TERM 3856 2834365 - 2834347 - R 77 -5.2 -4.98531 | overlap 2834356 2834358 TTCCGAAATCAAAAA CCGGGAGA ATA TCTCACAG GAGACATAGCACCTT ECS88_2857 2835146 - 2834340 - | hypothetical protein TERM 3857 2834383 - 2834401 + g 70 -3.9 -4.70772 | GACATAGCACCTTTC TTTCTGA GATCA TCAGGAA TTTTCTTACCTATAT TERM 3858 2835353 - 2835336 - H 72 -8.4 -3.64685 | opp_overlap 2835336 AAAATCCCTTAAGAA CCAGCC TATTAT GGCTGG TTTTTTTATGATTGT TERM 3859 2835336 - 2835353 + H 100 -8.4 -5.73339 | opp_overlap 2835336 AAAATCCCTTAAGAA CCAGCC TATTAT GGCTGG TTTTTTTATGATTGT ECS88_2859 2835603 - 2835740 + | putative protein from DinI-like family TERM 3860 2835863 - 2835896 + F 77 -9.7 -3.66378 | gap 1, overlap 2835864 AAGTTCACCAGCCAG TCGTA-GCACGTCCTT GCA AACGACGTGCCTACGG TTTCAATCACCTCTC TERM 3861 2835864 - 2835895 + F 74 -11 -2.79505 | gap 1, overlap 2835863 AGTTCACCAGCCAGT CGTA-GCACGTCCTT GCA AACGACGTGCCTACG GTTTCAATCACCTCT TERM 3862 2836044 - 2836057 + F 74 -2.3 -5.30155 | opp_overlap 2836040, overlap 2836040 2836045 AAGCCCTAAAACGTC AGCGT TCAG ACGCG TTTTTTACTTAATCG ECS88_2860 2836105 - 2838054 + | hypothetical protein TERM 3863 2838100 - 2838077 - f 75 -11 -2.93712 | opp_overlap 2838071 2838069, overlap 2838069 2838072 2838070 AATAAAATGATTATA GTGGCCTTAC ATTA GTAAGGCCGC TACTCACTATTAAAT ECS88_2862 2838305 - 2838799 + | hypothetical protein TERM 3864 2839162 - 2839207 + G 72 -10.6 -3.06796 | gap 1, overlap 2839164 AATTCGTGGCTGGAT TATCTGGACGCACTGGAACTG GTCGA TACTTCCTGTGCG-CCAGATA TTGAATGGCCTACGC ECS88_2863 2838802 - 2839245 + | putative tail fibre assembly protein tfaE 2839819 - 2839217 - | putative tail fiber chaperone (assembly protein); e14 prophage ECS88_2865 2840562 - 2839819 - | putative phage tail protein TERM 3865 2839908 - 2839930 + g 89 -13.6 -3.25282 | overlap 2839904 CCGACACGGACTGGT CATTACCGTT GCT AACGGTAATG TTACTACTGGTTGAT TERM 3866 2840514 - 2840540 + g 86 -9.4 -4.41353 | overlap 2840536 TAAAACCGTTCTTAC CCGCGCCGAA CTTATCC TTCTGCGCGG TTTTCGTGTCTATAC ymfQ 2841150 - 2840566 - | conserved hypothetical protein; e14 prophage ECS88_2867 2842199 - 2841141 - | putative baseplate J-like phage protein TERM 3867 2842072 - 2842050 - G 70 -10.6 -2.74461 | opp_overlap 2842049, overlap 2842049 GATGTACCCGTAAAC CGTATGCAGC GCC GCCGCATACA CCTTTGCCCGCACGT ECS88_2868 2842614 - 2842186 - | putative tail protein ECS88_2869 2843159 - 2842611 - | putative baseplate assembly phage protein ECS88_2870 2844238 - 2843159 - | Tail protein ECS88_2871 2845605 - 2844235 - | Tail/DNA circulation protein TERM 3868 2844765 - 2844779 + g 70 -5.6 -4.37534 | overlap 2844757 2844766 CGTTACGCTGCTGCG TCGCCG TGG CGGTGG TTTTACTGTCCGTTT TERM 3869 2845600 - 2845585 - G 100 -9 -5.36441 | opp_overlap 2845584 TCCGTACATAAAAAA TCCCAC CGGA GTGGGA CTCATTAACAGATTA ECS88_2872 2847459 - 2845624 - | phage tail tape measure protein TERM 3870 2847027 - 2847041 + g 88 -2.1 -5.55698 | gap 1, opp_overlap 2847023, overlap 2847024 2847023 TTGCGGCAAACTCGG CAGCCG CTTC CGG-TG TTTTTTTCAGTTGTA TERM 3871 2847568 - 2847550 - R 95 -14.6 -3.22091 | ATTCGAAGGGATTAA TGCGCCAG TAG CTGGCGCA GTCAAAGAAGCGATC ECS88_2874 2847870 - 2847601 - | hypothetical protein ECS88_2875 2848226 - 2847870 - | putative phage tail protein TERM 3872 2848166 - 2848188 + g 73 -11.3 -2.75577 | overlap 2848163 2848162 GCACCTCAATGCCGC CGGTCAGCG ATAGC TGCTGACCG TCAATTTTGAAATAA ECS88_2876 2849722 - 2848226 - | Tail sheath protein TERM 3873 2848570 - 2848607 + g 78 -5.3 -4.81551 | overlap 2848562 TGGTATGCAGCGTCT CGCTGTCGAGGTAGCTG TTAT CCGCAACCCCGTAAGCG TTTTTCCTGTACGTG TERM 3874 2848889 - 2848909 + g 72 -9.7 -3.29511 | opp_overlap 2848889 GTGCTGCTGGTTAAA CTGGTCACC TGC GGTCACCAG TTCTGACAGCGTGCC TERM 3875 2848909 - 2848889 - G 74 -9.7 -3.53012 | opp_overlap 2848889 GTGCTGCTGGTTAAA CTGGTCACC TGC GGTCACCAG TTCTGACAGCGTGCC ECS88_2877 2849876 - 2849706 - | hypothetical protein ECS88_2878 2850445 - 2849885 - | hypothetical protein TERM 3876 2850265 - 2850282 + g 84 -4.1 -5.18371 | CCTCTTTCAGCTCCT GCCAG TAGTCGGT CTGGC TTTTGTTTTCTCCCG ECS88_2879 2850948 - 2850442 - | hypothetical protein TERM 3877 2850889 - 2850871 - GR 81 -9.5 -3.89881 | ACCAATCGTGACAAA CGCCCGC CGGAC ACGGGCG CGGTTAAAGCGCATC ECS88_2880 2851333 - 2850923 - | putative phage head-tail adaptor ECS88_2881 2851653 - 2851330 - | hypothetical protein ECS88_2882 2851856 - 2851656 - | hypothetical protein TERM 3878 2851900 - 2851876 - R 100 -13.6 -3.30124 | gap 1, opp_overlap 2851876, overlap 2851879 CTTCACCCGTCAGAA CAGGGGGCGCG GTTC CGCGCCC-CTG AGTGATTACGCCGCT TERM 3879 2851898 - 2851879 - R 100 -16.4 -2.5294 | opp_overlap 2851876, overlap 2851876 CACCCGTCAGAACAG GGGGCGCG GTTC CGCGCCCC TGAGTGATTACGCCG ECS88_2883 2853111 - 2851906 - | putative major capsid protein TERM 3880 2852989 - 2853000 + g 81 -5.8 -4.77438 | overlap 2852982 GGTTTCCACCTGCCC GGCA AGTT TGCC TTTTTCCTGCTCAAT ECS88_2884 2853812 - 2853126 - | putative phage pro-head protease TERM 3881 2853231 - 2853265 + gr 100 -2.7 -5.80817 | overlap 2853232 2853237 TGCTTTGGCCTGGGT ACGGGAGAGTCCGAC ATCAC GCAGGACTCTTTCGA TTTTTTTCTGTTCGG TERM 3882 2853443 - 2853462 + gr 100 -13.6 -3.33261 | opp_overlap 2853443 CGTACCCAATAGAAA GGCCGGTT AACG AACCGGCC TTCATGTGTGCATGT TERM 3883 2853462 - 2853443 - GR 100 -13.6 -4.21607 | opp_overlap 2853443 CGTACCCAATAGAAA GGCCGGTT AACG AACCGGCC TTCATGTGTGCATGT ECS88_2885 2854995 - 2853754 - | putative phage portal protein TERM 3884 2854911 - 2854964 + gr 73 -3.8 -4.87291 | gap 3, opp_overlap 2854917, overlap 2854912 CGGTATAGGTGTCGT ATGACAGC-CCGATAGCCTCCGCCAGC TCT GCTGGCGTGGTC-ACCGGCGC-GTCAC TTTTTCGTTGAAATA ymfR 2855177 - 2854995 - | conserved hypothetical protein; e14 prophage ECS88_2887 2856922 - 2855189 - | putative phage terminase TERM 3885 2855927 - 2855944 + g 77 -2.7 -5.07652 | gap 1 CGCCGAACGCGCCGA CACC-CAG ATA TTGAGGTG TTTTGTTTTAAAGAC TERM 3886 2856029 - 2856046 + g 72 -5.6 -4.57073 | GCGATAAACCGACAC GCCAAT ATTTGG ATTGGC TTTTTCCAGCACCTG ECS88_2888 2857422 - 2856919 - | putative phage terminase, small subunit TERM 3887 2857036 - 2857047 + g 74 -2.2 -5.1287 | CGTGCTGCTCATCTC GGAC TCCT GTTC TTTTTTGGCTGTCAG TERM 3888 2857104 - 2857123 + g 74 -6.5 -4.56775 | TTGCGCCGGTGATGG TATTGCC CTGTAT GGCAATA TTTTTCACAGCACGT ECS88_2889 2857889 - 2857539 - | putative endonuclease TERM 3889 2857847 - 2857868 + g 72 -7.1 -4.20696 | CAGTGGTGGTTTGGC GGCAGCCGC GAAC GCGGCAGGC TTTTGGGGTTCGTGG TERM 3890 2858298 - 2858309 + G 72 -4.4 -4.68511 | ATTGATTTATTTTTA TCCA AAGG TGGA TTTATTTATATTAGA ECS88_2890 2857929 - 2858432 + | hypothetical protein ECS88_2891 2858790 - 2858539 - | hypothetical protein rz 2859298 - 2858861 - | endopeptidase; bacteriophage lysis protein r 2859771 - 2859295 - | Lysozyme (Lysis protein) (Muramidase) (Endolysin) ECS88_2894 2860162 - 2859758 - | Putative holin protein TERM 3891 2860042 - 2860027 - G 72 -6.8 -4.27443 | overlap 2860024 TGATCAGCAAAACAA GCCAGA ACGC TCCGGC AAGATTCTCTTTTTC TERM 3892 2860152 - 2860168 + g 74 -5.9 -4.4891 | AAATTACATTCTAAT TCATCAG GCA TTGATGA TTTTATAATAATAAA TERM 3893 2860172 - 2860213 + r 100 -14.2 -4.68908 | gap 1, opp_overlap 2860177 2860180 2860184, overlap 2860174 2860177 AGGCATTGATGATTT TAT-AATAATAAAGGCCGT TCGTT ACGGCCTTTATTATTGATA TTTATTTTACATCCC TERM 3894 2860174 - 2860210 + r 100 -16.2 -2.962 | opp_overlap 2860177 2860180 2860184, overlap 2860172 2860177 GCATTGATGATTTTA TAATAATAAAGGCCGT TCGTT ACGGCCTTTATTATTG ATATTTATTTTACAT TERM 3895 2860207 - 2860177 - R 100 -15.7 -3.34043 | opp_overlap 2860177 2860174 2860172, overlap 2860180 2860184 TTGATGATTTTATAA TAATAAAGGCCGT TCGTT ACGGCCTTTATTA TTGATATTTATTTTA TERM 3896 2860177 - 2860207 + r 100 -15.7 -3.60072 | opp_overlap 2860177 2860180 2860184, overlap 2860174 2860172 TTGATGATTTTATAA TAATAAAGGCCGT TCGTT ACGGCCTTTATTA TTGATATTTATTTTA TERM 3897 2860204 - 2860180 - R 100 -13 -3.81 | opp_overlap 2860177 2860174 2860172, overlap 2860177 2860184 ATGATTTTATAATAA TAAAGGCCGT TCGTT ACGGCCTTTA TTATTGATATTTATT TERM 3898 2860200 - 2860184 - R 89 -9.4 -4.51812 | opp_overlap 2860177 2860174 2860172, overlap 2860180 2860177 TTTTATAATAATAAA GGCCGT TCGTT ACGGCC TTTATTATTGATATT ECS88_2895 2860550 - 2860215 - | hypothetical protein TERM 3899 2860612 - 2860627 + r 74 -10.4 -3.17219 | opp_overlap 2860612 ACAAGTAAATAAAAA CCCGCT CAAC AGCGGG TTCGTGAAAATTATC TERM 3900 2860627 - 2860612 - R 100 -10.4 -5.39681 | opp_overlap 2860612 ACAAGTAAATAAAAA CCCGCT CAAC AGCGGG TTCGTGAAAATTATC ydfT 2861488 - 2860736 - | putative antitermination protein Q; Qin prophage ECS88_2897 2862497 - 2861502 - | hypothetical protein TERM 3901 2861817 - 2861797 - G 72 -4.6 -4.66537 | overlap 2861800 GGGCGTAACATAAAA GACTCCGG CGACT CCGGATCC ACTTTCAGCGCCAGC ECS88_2898 2863296 - 2862499 - | putative KilA protein; KilA-N domain TERM 3902 2863122 - 2863145 + g 73 -9.6 -3.65314 | overlap 2863123 CTGGCTCTATATTGA CCGAGTTGCA AATC TGCAACTCGC TTATTAAACGTTCAG TERM 3903 2863123 - 2863144 + g 81 -13.1 -2.78867 | overlap 2863122 TGGCTCTATATTGAC CGAGTTGCA AATC TGCAACTCG CTTATTAAACGTTCA rusA 2863705 - 2863316 - | Crossover junction endodeoxyribonuclease ECS88_2900 2864028 - 2863702 - | putative regulatory protein; lexA-binding domain dam 2864711 - 2864025 - | putative AdoMet-dependent methyltransferase yfdN 2865172 - 2864678 - | conserved hypothetical protein; CPS-53 (KpLE1) prophage TERM 3904 2864724 - 2864739 + gr 72 -6.8 -4.18018 | CACTCTTCACCCGAT GCAGCG CGCT TGCTGC TTTTCCGTAAGCACC ECS88_2903 2866110 - 2865169 - | putative phage replication protein O TERM 3905 2865622 - 2865656 + g 100 -8.4 -5.71712 | CTCCTGTTCAGCCGT CTGCGTGTCCGGTTGC GAA GCGTCCGGACGAGAAG TTTTTTTATCTGACG TERM 3906 2865714 - 2865729 + g 81 -4.6 -5.03747 | overlap 2865715 CCCCGCCAGATTCTG ACGGGT GAAA ACCCGC TTTTTTGCCAGATTT TERM 3907 2865744 - 2865786 + g 81 -9.4 -4.09685 | gap 1 CTTTTTTGCCAGATT TC-GACGCATCAAATTTTG ACGGGG CAGATTTTGATGCGTCAGA TTTTGACGGGTCAGA ymfM 2866458 - 2866120 - | conserved hypothetical protein; e14 prophage ymfL 2867018 - 2866455 - | putative nucleic acid-binding protein; e14 prophage ECS88_2907 2867553 - 2867050 - | putative DNA-binding transcriptional regulator TERM 3908 2867126 - 2867142 + gH 88 -5.1 -5.25803 | opp_overlap 2867139 TGCTCAAGTTTTTTA GCCAG CACAAAA CTGGC TTTTTTATAGCCATT TERM 3909 2867303 - 2867327 + gH 73 -5 -4.62957 | opp_overlap 2867290 2867305, overlap 2867298 2867304 2867305 AATGAACCTTCAAGA TACTTGTACC TTAAC GGTACAAGGG TTTTAATTTCGTTAT TERM 3910 2867325 - 2867305 - GH 71 -9.8 -3.08867 | opp_overlap 2867298 2867305 2867304 2867303, overlap 2867290 TGAACCTTCAAGATA CTTGTACC TTAAC GGTACAAG GGTTTTAATTTCGTT ymfK 2867341 - 2868015 + | repressor protein phage e14; e14 prophage TERM 3911 2868030 - 2868043 + Tr 100 -8.1 -5.71983 | opp_overlap 2868030 ATCAATGTTTATGAA CCTGC TTCG GCAGG TTTTTTTATACTTGA ECS88_2909 2868169 - 2868023 - | hypothetical protein TERM 3912 2868189 - 2868174 - R 100 -8.2 -5.5112 | opp_overlap 2868174 GTTAGCAACAAAAAA GCGCCC TATA GGACGC TTCGCTCTTTAACAA ECS88_2910 2868730 - 2868218 - | conserved hypothetical protein; putative exported protein TERM 3913 2869015 - 2869056 + G 93 -10.1 -4.56597 | gap 1, overlap 2869013 2869016 GCTGTGTGTAGTCCT G-GCGGTACCAGCTTGTACC CTT GCTTCCGGCTGGTACCGCTC TTTTTACAAAACAGA TERM 3914 2869016 - 2869054 + G 100 -13.8 -3.90048 | overlap 2869013 2869015 CTGTGTGTAGTCCTG GCGGTACCAGCTTGTACC CTT GCTTCCGGCTGGTACCGC TCTTTTTACAAAACA TERM 3915 2869124 - 2869134 + G 70 -6.8 -4.02733 | opp_overlap 2869111 2869107, overlap 2869120 CACCCGGGCGGCTGC CACC GCA GGTG TTCTTCTCTGTTTTG ECS88_2911 2868881 - 2869561 + | hypothetical protein yfdQ 2869627 - 2870451 + | conserved hypothetical protein; CPS-53 (KpLE1) prophage TERM 3916 2870467 - 2870482 + F 82 -10.4 -3.86346 | opp_overlap 2870467 TTTCATTACTGCAAA TGCCCC TGCG GGGGCA TTTATGGAAACGTAA TERM 3917 2870482 - 2870467 - f 78 -10.4 -3.62096 | opp_overlap 2870467 TTTCATTACTGCAAA TGCCCC TGCG GGGGCA TTTATGGAAACGTAA TERM 3918 2870661 - 2870636 - g 84 -7.7 -4.60949 | gap 1, opp_overlap 2870636 2870637, overlap 2870638 GACAGGATAAATAAA GACGACATCGTT ATT AACGATATCG-C GGTTTCTCTTTCAAA TERM 3919 2870660 - 2870638 - g 90 -11.4 -3.90309 | opp_overlap 2870637 2870636, overlap 2870636 CAGGATAAATAAAGA CGACATCGTT ATT AACGATATCG CGGTTTCTCTTTCAA yfdR 2870579 - 2871103 + | conserved hypothetical protein; CPS-53 (KpLE1) prophage ECS88_2915 2871188 - 2872078 + | hypothetical protein ECS88_2916 2872081 - 2872326 + | hypothetical protein TERM 3920 2872460 - 2872437 - gT 78 -8.8 -4.04415 | overlap 2872439 CCAAAGAACATTAAA TACGCCGAGC GTAC ACTCGGCGAA ATCCATAATAAGATC TERM 3921 2872458 - 2872439 - gT 87 -11.4 -3.59781 | overlap 2872437 AAAGAACATTAAATA CGCCGAGC GTAC ACTCGGCG AAATCCATAATAAGA ECS88_2917 2872287 - 2873459 + | hypothetical protein ECS88_2918 2874068 - 2873451 - | hypothetical protein ECS88_2919 2874405 - 2874079 - | hypothetical protein ECS88_2920 2875321 - 2874410 - | hypothetical protein ECS88_2921 2875287 - 2875550 + | hypothetical protein TERM 3922 2875616 - 2875592 - fH 91 -6.3 -5.39721 | overlap 2875597 2875602 TGAGGAGACAAAAAA GGATACGCAAC GGA GTCGCGACTCC CTATGACATTAAAGC TERM 3923 2875645 - 2875630 - fH 93 -11.8 -3.86202 | opp_overlap 2875630 CCCTATGACATTAAA GCCCGC TGAT GCGGGC TTTTTTATTGGTCCT TERM 3924 2875630 - 2875645 + FH 100 -11.8 -5.52023 | opp_overlap 2875630 CCCTATGACATTAAA GCCCGC TGAT GCGGGC TTTTTTATTGGTCCT ygaT 2876182 - 2877159 + | hypothetical protein TERM 3925 2877291 - 2877281 - g 70 -4.6 -4.56597 | overlap 2877283 2877284 GCGTTGCTGGAAAAA GAGC CCG GCCC GGCCTGTCACCAGAC TERM 3926 2877808 - 2877826 + G 70 -5.2 -4.38927 | opp_overlap 2877807, overlap 2877809 CCGGCTGGTGAAAAT GCTCGG CCTCGAA CCGGGC TTTATTATCTGCCCG TERM 3927 2877918 - 2877928 + G 88 -8.2 -4.60041 | overlap 2877906 ACCCCATTCCCGACC CGGC AAT GCCG TTTTTGGGCGTGCAT ygaF 2877179 - 2878447 + | putative enzyme TERM 3928 2878975 - 2879027 + G 74 -9.9 -3.50393 | gap 3, opp_overlap 2878968 2878969 CCCGTAAAGCCGGTC CGGCG-CTGGC-GGCAGGCTGCA-CG ATGG TGCTGAAGCCCGCCAGTCAGACGCCG TTCTCTGCGCTGGCG TERM 3929 2879250 - 2879223 - g 79 -2.6 -5.28755 | gap 1, opp_overlap 2879235 2879237 2879237 AAAGACATCAAAAAA GTGTCGCTGGAGC TGG GCGGCAACG-CAC CGTTTATTGTCTTTG gabD 2878470 - 2879918 + | succinate-semialdehyde dehydrogenase I, NADP-dependent gabT 2879932 - 2881212 + | 4-aminobutyrate aminotransferase, PLP-dependent TERM 3930 2881234 - 2881246 + F 71 -9.1 -3.30124 | overlap 2881233 2881243 ACCCATGCCGGAGGC GACGC TGC GCGTC TTGTCCGGCCTACGC gabP 2881450 - 2882850 + | gamma-aminobutyrate transporter TERM 3931 2883076 - 2883099 + G 70 -6.8 -4.07568 | gap 1, overlap 2883078 ATCGGGTGGCGTCTA TGTCAGAGCAG GAG CTGCTC-GATA TTTTCGACGCCCGCG TERM 3932 2883441 - 2883466 + G 73 -11.8 -2.56596 | overlap 2883437 CTGACTGCGACGGTA CTGGCGCGAG ATACCG CGCGCGCCAG TGAGTTAATGCGCCA csiR 2882871 - 2883533 + | DNA-binding transcriptional dual regulator ygaU 2883983 - 2883534 - | hypothetical protein TERM 3933 2883561 - 2883583 + g 88 -8.4 -4.63184 | overlap 2883558 2883562 2883578 AATACGCAACACTTG CCCCGGGTAA ATT TTATCCGGGC TTTTTAGCATCGGTT TERM 3934 2883562 - 2883582 + g 80 -11.9 -3.37188 | overlap 2883558 2883561 2883578 ATACGCAACACTTGC CCCGGGTAA ATT TTATCCGGG CTTTTTAGCATCGGT TERM 3935 2883599 - 2883613 + g 71 -2.8 -4.77567 | overlap 2883601 TTTTTAGCATCGGTT TATTCG CTT CGAAGA TTTTATTGTACAGAT TERM 3936 2884051 - 2884032 - R 90 -12.8 -3.29649 | AGTGTAGCAGAGGAA CGCGGCGC GTTA ACGCCGCG GGGGTGAACACAGGT yqaE 2884225 - 2884067 - | hypothetical protein TERM 3937 2884276 - 2884264 - H 76 -6.3 -4.58395 | CTCATTGTTTAAAAA GAGAT TTT ATCTC TTAAGCGTAGTAATT ygaV 2884408 - 2884707 + | putative DNA-binding transcriptional regulator ygaP 2884717 - 2885241 + | conserved hypothetical protein; putative inner membrane protein with hydrolase activity stpA 2885692 - 2885288 - | DNA binding protein, nucleoid-associated TERM 3938 2885408 - 2885425 + g 83 -6.2 -5.00616 | overlap 2885407 GATGAATTTATATTT CGCCGG ACGCGG CTGGCG TTTTTTACCAGCGCG ygaW 2886360 - 2886809 + | conserved hypothetical protein; putative inner membrane protein TERM 3939 2886818 - 2886844 + T 89 -12.2 -3.68619 | overlap 2886820 AGCCTGACCCTTCTT TTCGCGACTGGC ATC GCCAGTCGCGTC TTTAACTGGCTTCGC TERM 3940 2886820 - 2886842 + T 100 -19.2 -3.42283 | overlap 2886818 CCTGACCCTTCTTTT CGCGACTGGC ATC GCCAGTCGCG TCTTTAACTGGCTTC ygaC 2887190 - 2886846 - | hypothetical protein TERM 3941 2887012 - 2887022 + g 70 -5.4 -4.43681 | overlap 2886998 2886995 GGTTCAGCCAGTGTT GAAC TAC GTTC TTTTAATGTTGGATG ygaM 2887330 - 2887671 + | hypothetical protein TERM 3942 2887703 - 2887723 + T 100 -16.9 -5.15969 | opp_overlap 2887693 AATACGCGTCTTTGA CCCCGAAGC CTG GCTTCGGGG TTTTTTAGCTTAAGG ECS88_2937 2889062 - 2887728 - | putative fused protein: aminotransaminase/transcriptional regulator, GntR family ECS88_2938 2889150 - 2889581 + | hypothetical protein nrdH 2889790 - 2890035 + | glutaredoxin-like protein nrdI 2890032 - 2890442 + | protein that stimulates ribonucleotide reduction TERM 3943 2891456 - 2891488 + GF 71 -7.7 -3.72141 | opp_overlap 2891485 AAATACCTCAACGCC CGTGATTTCTTCCAG CGA CTGGCAGAAATCCAG TTTGAGTCTGGCTAT TERM 3944 2891709 - 2891736 + GF 71 -8.4 -3.54129 | gap 1, overlap 2891709 ATTCCCCCGACTTTG CC-CGCACGGTAG AGA CTGCCGTACGCGG TTTAACGGCGGTGTC nrdE 2890415 - 2892559 + | ribonucleoside-diphosphate reductase 2, alpha subunit TERM 3945 2892966 - 2892952 - g 70 -3.5 -4.67982 | gap 1, overlap 2892953 2892954 CTGGAGCGAAGAAAA CGC-GC CGTT GCAGCG AAAAGCACAGATTAT TERM 3946 2893204 - 2893186 - g 76 -3.8 -5.00846 | overlap 2893189 TAAATATCAGAAAAA CCAGGAAA AGA TCTCCCAG GCACAGCGTGAAGAG nrdF 2892569 - 2893528 + | ribonucleoside-diphosphate reductase 2, beta subunit, ferritin-like TERM 3947 2893643 - 2893667 + F 100 -7.2 -5.62219 | CTCTGTTGCATTATT CGCCTGAA ACCACAATA TTCAGGCG TTTTTTTGCTATCTT proV 2893884 - 2895086 + | glycine betaine transporter subunit ; ATP-binding compoent of ABC superfamily TERM 3948 2895298 - 2895311 + G 72 -6.7 -4.28018 | opp_overlap 2895289 ACTGAAGGGATCGAC TGGGT CGTT ACCCA TTTTCGTCCCGTCTT proW 2895079 - 2896143 + | glycine betaine transporter subunit ; membrane component of ABC superfamily TERM 3949 2896153 - 2896171 + F 76 -10.2 -3.31144 | overlap 2896154 AAGTAACTCTGCACT TGCCCGGT GAC GCCGGGCG TTATCACCCTGCCAA TERM 3950 2896154 - 2896170 + F 77 -11.5 -2.58544 | overlap 2896153 AGTAACTCTGCACTT GCCCGGT GAC GCCGGGC GTTATCACCCTGCCA proX 2896201 - 2897193 + | glycine betaine transporter subunit ; periplasmic-binding component of ABC superfamily TERM 3951 2897185 - 2897173 - f 71 -9.1 -3.33696 | GGCTGGGTGAATGAA GCGCT GGC AGCGC AGAAGTAATTTTTAT TERM 3952 2897203 - 2897235 + F 75 -10.6 -2.87931 | gap 1 AAGTAATTTTTATTC G-GGCGGATAAGGCG TTTT TGCCTCATCCGCCGC TCTGTACACAATGCC ECS88_2946 2897385 - 2898569 + | putative transport protein (ousB-like) ygaZ 2898693 - 2899430 + | putative transporter TERM 3953 2899657 - 2899667 + G 70 -6.8 -4.03234 | GTCGGCTTCGCGGTA CTGG GTG CCAG TTTCTATAAAACACG ygaH 2899420 - 2899755 + | conserved hypothetical protein; putative inner membrane protein mprA 2899846 - 2900376 + | DNA-binding transcriptional repressor of microcin B17 synthesis and multidrug efflux TERM 3954 2900424 - 2900447 + F 100 -12.5 -4.56597 | opp_overlap 2900423 2900422 2900420 2900440 AAAGAAAAAATGACT GGCCAGCAT CGCAAC ATGCTGGCC TTTTTGGCAAGCAGG TERM 3955 2900914 - 2900903 - g 86 -5.8 -5.03314 | TTGAGGTGCAAAAAA TCGC CCTC GCGA AAGCACAAAGCGACT emrA 2900503 - 2901675 + | multidrug efflux system emrB 2901692 - 2903230 + | multidrug efflux system protein TERM 3956 2903241 - 2903256 + F 100 -10.4 -5.34309 | opp_overlap 2903241 ACTAAGGTTGTCAAA GGGAGC TGCG GCTCCC TTTTTATTTGCTCAT TERM 3957 2903256 - 2903241 - f 77 -10.4 -3.55801 | opp_overlap 2903241 ACTAAGGTTGTCAAA GGGAGC TGCG GCTCCC TTTTTATTTGCTCAT TERM 3958 2903350 - 2903367 + F 72 -7.7 -3.90608 | overlap 2903351 TCACCATTAACCGGT TCTGAGC ATTC GCTCAGG TTGTTAATTCTCTTT TERM 3959 2903631 - 2903620 - g 74 -2.2 -5.03994 | GTGCACACAGAAAAA CTCG ACGG CGAA AATAACTGCCTTAAC ECS88_2952 2903488 - 2904195 + | hypothetical protein TERM 3960 2904580 - 2904613 + G 72 -7.3 -4.24342 | overlap 2904593 GTCTGCATGGGTTAC CGCTATGGTTACTGG AACG CCCGGAACCGGAGCG TTTGTTGCTCACGGC ECS88_2953 2904192 - 2905304 + | putative RNA related enzyme TERM 3961 2905307 - 2905339 + T 75 -9.8 -3.51825 | gap 1, opp_overlap 2905310, overlap 2905309 2905310 GACTGACAGGTAACA AAAGCCGGGC-GGTG TTTT CACCAGCCCGGCCTC TTCTGCTTAAACTGA TERM 3962 2905309 - 2905337 + T 90 -12.4 -3.33214 | gap 1, opp_overlap 2905310, overlap 2905307 2905310 CTGACAGGTAACAAA AGCCGGGC-GGTG TTTT CACCAGCCCGGCC TCTTCTGCTTAAACT TERM 3963 2905310 - 2905336 + T 100 -15.9 -2.59447 | gap 1, opp_overlap 2905310, overlap 2905309 2905307 TGACAGGTAACAAAA GCCGGGC-GGTG TTTT CACCAGCCCGGC CTCTTCTGCTTAAAC TERM 3964 2905336 - 2905310 - T 100 -15.9 -4.70169 | gap 1, opp_overlap 2905310 2905309 2905307 TGACAGGTAACAAAA GCCGGGC-GGTG TTTT CACCAGCCCGGC CTCTTCTGCTTAAAC luxS 2905870 - 2905355 - | S-ribosylhomocysteinase TERM 3965 2905989 - 2906006 + r 100 -11.3 -5.4433 | CAGAGATGAAATTTT GGCCACT CACG AGTGGCC TTTTTCTTTATCTGT gshA 2907577 - 2906021 - | gamma-glutamate-cysteine ligase yqaA 2908078 - 2907650 - | conserved hypothetical protein; putative inner membrane protein yqaB 2908641 - 2908075 - | putative hydrolase csrA 2910016 - 2909831 - | pleiotropic regulatory protein for carbon source metabolism alaS 2912881 - 2910251 - | alanyl-tRNA synthetase recX 2913509 - 2913009 - | regulatory protein for RecA TERM 3966 2913563 - 2913534 - R 95 -8.5 -5.1925 | opp_overlap 2913540, overlap 2913535 2913540 TTACAACTTAAAAAA GCAAAAGGGCCGC AGAT GCGACCCTTGTGT ATCAAACAAGACGAT TERM 3967 2913562 - 2913535 - R 89 -12 -3.70465 | opp_overlap 2913540, overlap 2913534 2913540 TACAACTTAAAAAAG CAAAAGGGCCGC AGAT GCGACCCTTGTG TATCAAACAAGACGA TERM 3968 2913540 - 2913557 + r 72 -8.3 -3.58726 | opp_overlap 2913535 2913534 2913540 CTTAAAAAAGCAAAA GGGCCGC AGAT GCGACCC TTGTGTATCAAACAA TERM 3969 2913557 - 2913540 - R 91 -10.5 -4.86862 | opp_overlap 2913540, overlap 2913535 2913534 CTTAAAAAAGCAAAA GGGCCGC AGAT GCGACCC TTGTGTATCAAACAA recA 2914639 - 2913578 - | DNA strand exchange and recombination protein with protease and nuclease activity TERM 3970 2914384 - 2914364 - G 72 -7.5 -3.93695 | opp_overlap 2914380 2914381 2914383 TTCAGCATCGATAAA CGCACAGGT TTT ACCTTCGCG CTGCGCTGCGGCGAT ygaD 2915216 - 2914719 - | hypothetical protein TERM 3971 2915361 - 2915317 - R 82 -5 -5.28778 | gap 1, opp_overlap 2915318 2915322, overlap 2915318 AGGATTCAGAAAAAA GCTGATTAGCCAGAGGGAAGC TCAC GCCCCCCTCTTGCAAAT-AGT TACTGTACGCGCGCC TERM 3972 2915360 - 2915318 - R 75 -8.5 -3.76182 | gap 1, opp_overlap 2915318 2915322, overlap 2915317 GGATTCAGAAAAAAG CTGATTAGCCAGAGGGAAGC TCAC GCCCCCCTCTTGCAAAT-AG TTACTGTACGCGCGC mltB 2916446 - 2915361 - | membrane-bound lytic murein transglycosylase B TERM 3973 2915894 - 2915875 - G 71 -2.8 -4.83169 | gap 1, opp_overlap 2915878 AGCTCGCCAGAAAAA TACTC-CGC GCG GCGTGGGTA GTTAAATGACAGCGT TERM 3974 2916917 - 2916930 + G 70 -4.5 -4.51238 | overlap 2916914 GTTATCTGCTGCTAC CGTGC ATTG GTACG TTTGTCTTTTGTAAC srlA 2916703 - 2917266 + | glucitol/sorbitol-specific enzyme IIC component of PTS srlE 2917263 - 2918222 + | glucitol/sorbitol-specific enzyme IIB component of PTS srlB 2918233 - 2918604 + | glucitol/sorbitol-specific enzyme IIA component of PTS srlD 2918608 - 2919387 + | sorbitol-6-phosphate dehydrogenase TERM 3975 2919419 - 2919392 - f 70 -9.2 -3.14564 | gap 1, overlap 2919394 TGATGTTCTGATCAA CAGCGGAGATCTT TTA AGGATCTCCGC-G CGACTAATAGAATGC TERM 3976 2919418 - 2919394 - f 91 -12.9 -3.13522 | overlap 2919392 ATGTTCTGATCAACA GCGGAGATCTT TTA AGGATCTCCGC GCGACTAATAGAATG gutM 2919493 - 2919852 + | DNA-binding transcriptional activator of glucitol operon TERM 3977 2920613 - 2920589 - g 78 -10.8 -3.55444 | opp_overlap 2920611 TTTGTAGTCTTGAAA GCGTCGATAA GCTGA TTACCGACGC AGGTATCGATCCAGC srlR 2919919 - 2920692 + | DNA-bindng transcriptional repressor TERM 3978 2920883 - 2920896 + G 100 -3.7 -5.64274 | overlap 2920884 GCAACGCTTGCCAGC ACCGG CACA CCGGC TTTTTTTGTCCATCC gutQ 2920685 - 2921650 + | putative phosphosugar-binding protein norR 2923161 - 2921647 - | DNA-binding transcriptional activator TERM 3979 2923447 - 2923433 - g 90 -7.8 -4.76963 | overlap 2923434 GTACAGAATATAAAA CGCTGC GCG GCAGCA GCTACAACAGCTACC TERM 3980 2923446 - 2923434 - g 71 -9.1 -3.45093 | overlap 2923433 TACAGAATATAAAAC GCTGC GCG GCAGC AGCTACAACAGCTAC norV 2923348 - 2924787 + | flavorubredoxin oxidoreductase TERM 3981 2925092 - 2925116 + G 72 -7.8 -3.86015 | opp_overlap 2925093, overlap 2925093 GCAATACGACAAGTT AGTGCTGGCA ACCGG TGCCAGCGCC TTTGTCCCGCCAGTG TERM 3982 2925093 - 2925115 + G 75 -11.3 -2.91395 | opp_overlap 2925093, overlap 2925092 CAATACGACAAGTTA GTGCTGGCA ACCGG TGCCAGCGC CTTTGTCCCGCCAGT norW 2924784 - 2925917 + | NADH:flavorubredoxin oxidoreductase TERM 3983 2926067 - 2926034 - T 81 -9.5 -4.08767 | opp_overlap 2926041 2926042 2926044, overlap 2926035 TGCACTGTCCCAAAA TGTCGGATGCGACGC TGGC GCGTCTTATCCGACC TGCGGGGATGAATAT TERM 3984 2926066 - 2926035 - T 86 -13 -3.05046 | opp_overlap 2926041 2926042 2926044, overlap 2926034 GCACTGTCCCAAAAT GTCGGATGCGACGC TGGC GCGTCTTATCCGAC CTGCGGGGATGAATA hypF 2928393 - 2926141 - | carbamoyl phosphate phosphatase and maturation protein for [NiFe] hydrogenases TERM 3985 2926740 - 2926726 - G 90 -11.4 -3.86346 | opp_overlap 2926734 2926735 CCACTCCGGCACAAA GCGCAG GCA CTGCGC CAGCAGGTTTCGCCA TERM 3986 2928372 - 2928382 + g 77 -3.2 -5.09426 | opp_overlap 2928359 TACGCAGTTGGACAC CGCA AGA TGTG TTTTTTGCCATTGAG TERM 3987 2928558 - 2928572 + r 90 -9.2 -4.85599 | opp_overlap 2928555 2928557 TTTTTAGAACATCAG CGCCGT GCG GCGGCG TTTTTCTGCGCTCAG hydN 2929073 - 2928546 - | formate dehydrogenase-H, [4Fe-4S] ferredoxin subunit TERM 3988 2929209 - 2929179 - R 86 -7.7 -4.82667 | gap 1, opp_overlap 2929182 2929203, overlap 2929180 2929182 GTACTACAGGAAAAA CGATGTCATCGACA CTAG TGACGATGACAT-G TGATGACAATGTTTA TERM 3989 2929207 - 2929182 - R 76 -10.5 -3.30658 | opp_overlap 2929182 2929203, overlap 2929179 2929180 CTACAGGAAAAACGA TGTCATCGACA CTAG TGACGATGACA TGTGATGACAATGTT TERM 3990 2929182 - 2929207 + r 71 -10.5 -2.79679 | opp_overlap 2929179 2929180 2929182, overlap 2929203 CTACAGGAAAAACGA TGTCATCGACA CTAG TGACGATGACA TGTGATGACAATGTT ascG 2930235 - 2929222 - | DNA-binding transcriptional repressor ascF 2930492 - 2931949 + | fused cellobiose/arbutin/salicin-specific PTS enzymes: IIB component ; IIC component TERM 3991 2932735 - 2932746 + G 84 -3.6 -5.29782 | GCGCTGGAGAAAGAT CGGG AAAA CCTG TTTTTTATCGATGTG ascB 2931958 - 2933382 + | cryptic 6-phospho-beta-glucosidase TERM 3992 2933452 - 2933428 - T 79 -12.1 -2.57344 | opp_overlap 2933427 2933440, overlap 2933427 TATCCGGCCTACAAG GCCCGATAAGC GTT GCGCATCGGGC AATCTTGGGTTTGGC ECS88_2980 2933899 - 2933480 - | putative HTH-type transcriptional regulator ygjM ECS88_2981 2934110 - 2933925 - | conserved hypothetical protein; putative exported protein hycI 2934605 - 2934135 - | protease involved in processing C-terminal end of HycE TERM 3993 2934461 - 2934471 + g 70 -6.8 -4.14243 | GCAGTTCGCGGATAG CGAC AAT GTCG TTTTCCGGTGCGCTA hycH 2935008 - 2934598 - | protein required for maturation of hydrogenase 3 TERM 3994 2934929 - 2934952 + g 71 -11 -2.86747 | overlap 2934927 CTGTAATAGACCACC TGCTGCGCCT CGGC GGGCGTAGCA TCGTTCTCATCAATG hycG 2935772 - 2935005 - | hydrogenase 3 and formate hydrogenase complex, HycG subunit hycF 2936314 - 2935772 - | formate hydrogenlyase complex iron-sulfur protein hycE 2938033 - 2936324 - | hydrogenase 3, large subunit hycD 2938974 - 2938051 - | hydrogenase 3, membrane subunit hycC 2940803 - 2938977 - | hydrogenase 3, membrane subunit hycB 2941411 - 2940800 - | hydrogenase 3, Fe-S subunit TERM 3995 2940889 - 2940864 - G 74 -7.5 -4.08064 | opp_overlap 2940864 AAGTCCGTGTTAAAA GTCAGCTCACG CTTA CGTTTGCTGAC GCGGGCGATATCGGT TERM 3996 2941262 - 2941279 + g 74 -2.7 -4.99134 | gap 1, opp_overlap 2941264, overlap 2941264 2941265 TTCACAGTGGTGACA GAG-CTGC GGC GCAGATTC TTTTTCATTTAGCAT TERM 3997 2941487 - 2941449 - R 80 -8.3 -4.2558 | gap 1 CATTTTTGACGAAAA CATGCCGATGAAATGTCA TTTT CGACACT-CATCGACACG CCCATCCCCAAACAG TERM 3998 2941514 - 2941500 - R 87 -11.4 -3.57263 | opp_overlap 2941512 ACGCCCATCCCCAAA CAGGCG TAA CGCCTG CAAAACGGGCAAAGC hycA 2941997 - 2941536 - | regulator of the transcriptional regulator FhlA hypA 2942209 - 2942559 + | protein involved in nickel insertion into hydrogenases 3 hypB 2942563 - 2943435 + | GTP hydrolase involved in nickel liganding into hydrogenases TERM 3999 2943548 - 2943584 + G 88 -12.4 -3.60296 | gap 1 CGATGAAAACGGTCA GCCACGCGTGGGCCAGT GGGT ACTGGTTCACGT-TGGC TTTGCCATGAGCGTA hypC 2943426 - 2943698 + | protein required for maturation of hydrogenases 1 and 3 TERM 4000 2944047 - 2944037 - g 72 -6.8 -4.18018 | CTGTTGCAGGCAAAA GCAC GCG GTGC CGATGTGCGCATCGT TERM 4001 2944311 - 2944332 + G 72 -5.9 -4.36914 | GTCACGTTAGTATGG TTATCGGCA CTGA TGCCTATAA TTTTATCGCCAGCGA hypD 2943698 - 2944819 + | protein required for maturation of hydrogenases hypE 2944858 - 2945826 + | carbamoyl phosphate phosphatase, hydrogenase 3 maturation protein TERM 4002 2945866 - 2945882 + F 100 -13.7 -3.72576 | AGTCAATGACCTTTT GCACCGC TTT GCGGTGC TTTCCTGGAAGAACA TERM 4003 2945981 - 2945997 + G 72 -10.1 -3.35775 | overlap 2945980 CAGCAGCCCGATCTG GCCTCGC TGT GTGAGGC TCTTTCGCAACTGGT TERM 4004 2946068 - 2946016 - g 77 -10 -3.60792 | gap 2, opp_overlap 2946027 2946064 TTCGCAACTGGTAAA GCGTTCTGCGCTCGCCGACAACGC GGCGATT GTGTTGT-GGCAAGCGCAGA-CTC AACGTGCGTCTTATT TERM 4005 2946027 - 2946044 + G 72 -8.4 -3.7511 | opp_overlap 2946016 TAAAGCGTTCTGCGC TCGCCG ACAACG CGGCGA TTGTGTTGTGGCAAG TERM 4006 2947494 - 2947482 - g 85 -3.3 -5.44119 | overlap 2947483 GCGATCTGAAAAAAA TGGTC GCC GACCG AGAGTTCCGTAGCGA TERM 4007 2947883 - 2947870 - g 78 -5.2 -4.78326 | opp_overlap 2947877, overlap 2947871 GCTGAAAGAAACAAA CGGC GTGGTT GCCG GGCCTAAAGGCGCTG fhlA 2945900 - 2947978 + | DNA-binding transcriptional activator ECS88_2997 2947984 - 2948451 + | Putative molybdenum-pterin-binding-protein TERM 4008 2948460 - 2948488 + T 100 -16.1 -4.78326 | overlap 2948462 AGCGTAAGCGCCGTA TTTGCCGGAGAGT ATG GCTCTCCGGCAGA TTTATTTCTTTGGAC TERM 4009 2948462 - 2948486 + T 100 -16.5 -2.66462 | overlap 2948460 CGTAAGCGCCGTATT TGCCGGAGAGT ATG GCTCTCCGGCA GATTTATTTCTTTGG ygbA 2948834 - 2948490 - | hypothetical protein TERM 4010 2948960 - 2948974 + H 72 -5.6 -4.56597 | opp_overlap 2948961, overlap 2948961 TCGTCATCACGCAAA AGCTGC AAA GCAGCA TTTTTCGCGGAACCG TERM 4011 2948961 - 2948973 + H 71 -9.1 -3.33744 | opp_overlap 2948961, overlap 2948960 CGTCATCACGCAAAA GCTGC AAA GCAGC ATTTTTCGCGGAACC TERM 4012 2948973 - 2948961 - H 82 -9.1 -4.21194 | opp_overlap 2948960 2948961 CGTCATCACGCAAAA GCTGC AAA GCAGC ATTTTTCGCGGAACC TERM 4013 2950712 - 2950695 - g 70 -4.1 -4.62069 | opp_overlap 2950688 2950697 CTGGCACTGGAAAAA CAGCTTT ATGA AGAGCTG TTCGACCTGTTGCTG TERM 4014 2951643 - 2951612 - g 74 -8 -4.14739 | gap 1 CGAGGCATTGGAAAA CCTCGACCCGGATTC ACT GACTCCGCGTC-AGG CGCTGGAATGGATTT mutS 2949120 - 2951681 + | methyl-directed mismatch repair protein TERM 4015 2951688 - 2951714 + F 81 -11.7 -3.01924 | opp_overlap 2951688 CTGGTGTAATAATAA TTCCCGATAGT CTTTT GCTATCGGGAA TATTAACAACAACTG TERM 4016 2951714 - 2951688 - f 86 -11 -3.9461 | opp_overlap 2951688 CTGGTGTAATAATAA TTCCCGATAG TCTTTTG CTATCGGGAA TATTAACAACAACTG TERM 4017 2951781 - 2951746 - f 100 -10.6 -5.38326 | CGAATCAAATAAAAA TACCCTGTATAATAGG AAAG CTTATTTTACAGGGTA AAACCATGCCATCTA pphB 2951787 - 2952443 + | serine/threonine-specific protein phosphatase 2 TERM 4018 2952556 - 2952519 - T 79 -9.7 -3.78775 | TTCGCTACCAGCAAA GAGAGATCCAGCTTCGC CAGC GCGCGGCTGGCACTCTC CGGCAGACCGTCGTC ygbI 2953291 - 2952494 - | putative DNA-binding transcriptional regulator TERM 4019 2952774 - 2952756 - G 93 -8.9 -5.0065 | GATGCAGAAATAAAA GCCTGAT CAATC ATCAGGC TACGCAGCATGGTCG ygbJ 2953457 - 2954365 + | putative dehydrogenase, with NAD(P)-binding Rossmann-fold domain TERM 4020 2955368 - 2955381 + G 75 -6.7 -4.4009 | AAAAAGCCAGTCAGG CAGTG GAAA CACTG TTTTCTCAACTAGCG TERM 4021 2955416 - 2955426 + G 75 -6.8 -4.30719 | GGTTAGCAGCGGAAG GCGT GAC ACGC TTTATTGTCGCAGGC ygbK 2954362 - 2955624 + | hypothetical protein ygbL 2955621 - 2956259 + | putative class II aldolase ygbM 2956264 - 2957040 + | hypothetical protein TERM 4022 2957078 - 2957095 + F 77 -11.3 -2.56095 | opp_overlap 2957075, overlap 2957076 CGTACCCATACATCC CCCCATC TACG GATGGGG TAGGTTAACTATAAC ygbN 2957129 - 2958493 + | putative transporter TERM 4023 2958588 - 2958556 - T 79 -11.5 -3.06969 | opp_overlap 2958556, overlap 2958560 TAATGTATGCCAATA TTAACCTCGGTAA TATCTCG CTACCGAGGTTAA TTTTCACTTTGCAAT TERM 4024 2958556 - 2958588 + T 90 -10.8 -4.35926 | opp_overlap 2958556 2958560 TAATGTATGCCAATA TTAACCTCGGTA ATATCTCGC TACCGAGGTTAA TTTTCACTTTGCAAT ECS88_3008 2959679 - 2958636 - | putative exported Zn-dependent hydrolase TERM 4025 2959529 - 2959543 + g 88 -8.6 -4.63089 | AAAGGTTATTGAGTT TATCGC TTG GCGATA TTATTTTTTCCGCTG ECS88_3009 2959904 - 2960455 + | putative protein with flavodoxin fold TERM 4026 2960613 - 2960592 - T 100 -12.3 -6.11229 | opp_overlap 2960592 2960591 ACCAAAAGAAAAAAA GCCAGCCTC GCTT GAGACTGGC CTTTCTGACAGATGC TERM 4027 2960592 - 2960613 + T 72 -10.1 -2.91924 | opp_overlap 2960592, overlap 2960591 ACCAAAAGAAAAAAA GCCAGCCTC GCTT GAGACTGGC CTTTCTGACAGATGC rpoS 2961625 - 2960633 - | RNA polymerase, sigma S (sigma 38) factor nlpD 2962827 - 2961688 - | outer membrane lipoprotein TERM 4028 2961949 - 2961930 - G 70 -7 -4.07133 | opp_overlap 2961929 TACCGGCATAAACAA CGCGGCCA TCTG CGGTCGCG ATAATTGCCTGTCCT TERM 4029 2962152 - 2962166 + g 72 -5 -4.65078 | TGGTCGCAGTTGGCT TGTTGT TCG GCAACA TTTTGTTAGCACTCT TERM 4030 2962436 - 2962446 + g 74 -2.4 -5.04385 | opp_overlap 2962432 CAGGCGATATAGAAA AGCG TGT CGCC TTTTTTCACGGTGTA pcm 2963593 - 2962967 - | L-isoaspartate protein carboxylmethyltransferase type II TERM 4031 2963106 - 2963132 + g 70 -10.9 -2.72511 | overlap 2963105 AGAATCCCGCCTTCG TCCAGCTGCGT CATTA GCGCAGTTGGA ATTTCAGGCGGTGCC surE 2964348 - 2963587 - | broad specificity 5'(3')-nucleotidase and polyphosphatase truD 2965378 - 2964329 - | pseudoruidine synthase TERM 4032 2964409 - 2964396 - G 70 -6.7 -4.07687 | ACGCTGGTTGCAAAA CTTCC CGCC GGAAG CCAGAAATGGATTTC ispF 2965854 - 2965375 - | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase ispD 2966564 - 2965854 - | 4-diphosphocytidyl-2C-methyl-D-erythritol synthase TERM 4033 2966529 - 2966517 - G 71 -9.1 -3.53224 | CATTCGGCGGCCAAA TCCGG CCG CCGGA ACCACGGCGCAAACA ftsB 2966894 - 2966583 - | cell division protein TERM 4034 2966977 - 2966999 + r 77 -11.4 -2.82142 | opp_overlap 2966975, overlap 2966976 ATACCGCGACAACGC GGGCAAATGT ACC ACATTTGTCC ATTGTTACGTATACC ygbE 2967410 - 2967087 - | conserved hypothetical protein; putative inner membrane protein cysC 2968065 - 2967460 - | adenosine 5'-phosphosulfate kinase TERM 4035 2968005 - 2967975 - G 79 -12.6 -3.00525 | opp_overlap 2967971 2967980 2967983 2968003, overlap 2967970 2967978 2967981 GGCCGGTAAACCACA GCACAACACCACGA TGA CCGTGGTGCTGTTC GCGTTGTTGCGGAGT TERM 4036 2968002 - 2967978 - G 81 -12.9 -2.7314 | opp_overlap 2967971 2967980 2967983, overlap 2967975 2967970 2967981 CGGTAAACCACAGCA CAACACCACGA TGA CCGTGGTGCTG TTCGCGTTGTTGCGG TERM 4037 2967999 - 2967981 - G 78 -11 -3.50929 | opp_overlap 2967980 2967971 2967983, overlap 2967978 2967975 2967970 TAAACCACAGCACAA CACCACGA TGA CCGTGGTG CTGTTCGCGTTGTTG TERM 4038 2968028 - 2968064 + g 81 -9.4 -4.14627 | TGCGGAGTTACTGGG TGGCTATGCCAGACGA CGTTT TCGTCATGCAGAGCCA TTATTTATCTCCCAG cysN 2969492 - 2968065 - | sulfate adenylyltransferase, subunit 1 cysD 2970402 - 2969494 - | sulfate adenylyltransferase, subunit 2 TERM 4039 2970554 - 2970542 - H 75 -4.8 -4.88228 | opp_overlap 2970551 AGCTAATATCAAAAA GTGC TTAAG GCAC CGGATTTCGGGCGTT iap 2970654 - 2971691 + | aminopeptidase in alkaline phosphatase isozyme conversion TERM 4040 2971784 - 2971816 + T 72 -10.5 -2.96329 | opp_overlap 2971784 2971785 2971788, overlap 2971781 ACCAAACCATCACAA TTCAGTACGCGGGGT TTT ACCCCGCGTGGTGGC TACTTCTTCGATTCG ECS88_3025 2971968 - 2971816 - | similar to host killing peptides encoded by hok genes TERM 4041 2972026 - 2972056 + r 88 -9.1 -4.45083 | gap 1, opp_overlap 2972047 TAGGTTCGAACGTAG GCCTCAGGTTGATA GAAA TATCG-CCTGGGGC TTTTGTCCATCTGGA TERM 4042 2972212 - 2972187 - R 100 -9.7 -5.45802 | opp_overlap 2972187 CTCGCAAAATAAAAA CGCCCCCATCA TTTC TGACAGAGGCG TTTAATTTATCCGGC cysH 2972967 - 2972233 - | 3'-phosphoadenosine 5'-phosphosulfate reductase cysI 2974753 - 2973041 - | sulfite reductase, beta subunit, NAD(P)-binding, heme-binding TERM 4043 2973425 - 2973396 - G 95 -11.5 -4.37092 | gap 1, overlap 2973408 2973409 ATGTTGTCGATAAAA GACGGCAGGAAACG CTC CGCTTCC-GCCATC GCCAGCGGGCAAGTC cysJ 2976552 - 2974753 - | sulfite reductase, alpha subunit, flavoprotein TERM 4044 2974941 - 2974959 + g 76 -7.4 -4.28188 | TCCAGCGCCACAGCT CTGCGC CCTGTTC GCGCAG TTTGTCTTGTACGTA TERM 4045 2976461 - 2976447 - G 70 -7.1 -4.0056 | overlap 2976439 AGAAATAGCCAGAAA CCCAG GCAAG CTGGG TAGGAGTTAAATCGG TERM 4046 2976779 - 2976799 + H 70 -6.2 -4.21194 | AATAAGATAAATCAG CGATTTTG CGCAA CAAAGTCG TTTTAGATAATGCGA TERM 4047 2977199 - 2977211 + G 73 -9.1 -3.64198 | opp_overlap 2977199 TGATGGTAAAAGAAA CCTGC ACC GCAGG TTGTATCTATCGCGG TERM 4048 2977211 - 2977199 - g 91 -9.1 -4.67048 | opp_overlap 2977199 TGATGGTAAAAGAAA CCTGC ACC GCAGG TTGTATCTATCGCGG ygcM 2976868 - 2977233 + | 6-pyruvoyl tetrahydrobiopterin synthase (PTPS) TERM 4049 2977359 - 2977390 + G 91 -11.5 -4.0174 | overlap 2977360 2977384 2977387 GCCGGTATTGCTGGC ACCGCTTGCGCGT TACGCT GCGCGCGAGCGGG TTTATCCGTTCTGTT TERM 4050 2977360 - 2977389 + G 93 -15 -2.99959 | overlap 2977359 2977384 2977387 CCGGTATTGCTGGCA CCGCTTGCGCGT TACGCT GCGCGCGAGCGG GTTTATCCGTTCTGT TERM 4051 2978047 - 2978063 + G 74 -10.1 -3.53811 | overlap 2978043 GTCGTGTTCCGGCAA GCGAGCT GCT GGCTCGC TTTAAAACGCATCCG ygcN 2977311 - 2978582 + | putative oxidoreductase with FAD/NAD(P)-binding domain ygcO 2978573 - 2978833 + | putative 4Fe-4S cluster-containing protein TERM 4052 2978919 - 2978942 + G 82 -7.4 -4.49906 | opp_overlap 2978906 AATGCCAGCCTGCAA CTGGCAATCG ACTC TGAATGCCAG TTTATTTCCGTGTTG ygcP 2978850 - 2979425 + | putative anti-terminator regulatory protein ygcQ 2980433 - 2979573 - | putative flavoprotein TERM 4053 2980059 - 2980091 + g 87 -4.7 -5.19879 | GTTTTTATCTGCTCC CGCCTGACGTGCC AGCGAAA GGCATAGCGGGCG TTTTTCTGTTTGCAG ygcR 2981209 - 2980430 - | putative flavoprotein ygcS 2982524 - 2981187 - | putative transporter TERM 4054 2981221 - 2981249 + g 76 -7.4 -4.16182 | gap 1, overlap 2981225 TCATTCGCACCTCCT GCATTTCCCGCCG CCAC CAGCGGG-AGTGC TTTGGTTTCTGGTGC TERM 4055 2981915 - 2981905 - G 77 -8.2 -4.08216 | opp_overlap 2981905, overlap 2981906 TGAGCTTCTGCAAAA CGCC CCT GGCG CAGTAGCCAGCGTGG TERM 4056 2982113 - 2982098 - G 78 -8.2 -4.25283 | overlap 2982101 ACGCGCCCAGCAAAA CACCGC GATG GCGGCG CGGAGAAAATTCAGC TERM 4057 2982576 - 2982555 - R 100 -14.5 -3.9461 | GTCCGGTAATAAGAA CGGCTTCTC GCCT GAGAAGCCG AAAAGGCAACGCCCC TERM 4058 2982610 - 2982581 - R 93 -11.4 -4.21936 | CTGAGAAGCCGAAAA GGCAACGCCCCG TCATCG CGGAACGCTGCC TGACACATTATTTTT ygcU 2984072 - 2982618 - | putative FAD containing dehydrogenase TERM 4059 2983187 - 2983203 + g 70 -10.1 -3.17392 | TCCCTTCACCCGTCG CCTTCGC AAT GCGAGGG TTACCTTCAGCCATA TERM 4060 2983477 - 2983497 + g 75 -4.5 -4.76041 | overlap 2983479 TGACGAATGTCCGGG CCAGCCGCG CGA CGTGGCACG TTTTTAATGCGTGTG TERM 4061 2983969 - 2983980 + g 82 -2.2 -5.34309 | GGAAATTTACGAAAA CGGT CAAT ACTG TTTTTCTTTAATACT ygcW 2984927 - 2984142 - | putative deoxygluconate dehydrogenase TERM 4062 2984997 - 2984960 - H 100 -22.3 -5.86332 | opp_overlap 2984960 2984964 GTAAGGCAAAAAAAA GAAAGGTAACTTCCCCC GCGA GAGGGAAGTTACCTTTC TCATTATCTCTGGTA TERM 4063 2984960 - 2984997 + H 100 -20.1 -2.92712 | opp_overlap 2984960, overlap 2984964 GTAAGGCAAAAAAAA GAAAGGTAACTTCCCCC GCGA GAGGGAAGTTACCTTTC TCATTATCTCTGGTA TERM 4064 2984964 - 2984993 + H 100 -15.1 -4.13 | opp_overlap 2984960, overlap 2984960 GGCAAAAAAAAGAAA GGTAACTTCCCCC GCGA GAGGGAAGTTACC TTTCTCATTATCTCT TERM 4065 2985001 - 2985023 + H 85 -7.8 -4.62069 | AAGTTACCTTTCTCA TTATCTCTGG TAA CTGGAGATAA TTTTTAGCATAAGGG TERM 4066 2985173 - 2985212 + H 100 -13 -6.08563 | opp_overlap 2985180 AATTACTAGAGACCT GAGAAAAGTAATCCACCT GAAA GGGCGGCTTACTTTTCTC TTTTTTTTGTCTATT TERM 4067 2985205 - 2985180 - H 70 -5.4 -4.4195 | opp_overlap 2985173 AGAGACCTGAGAAAA GTAATCCACC TGAAAG GGCGGCTTAC TTTTCTCTTTTTTTT yqcE 2985245 - 2986522 + | putative transporter TERM 4068 2986900 - 2986919 + G 70 -4.2 -4.69622 | overlap 2986903 GAACACACTAATCCT GACGTGGC ATAT GTCACCTC TTTTTCGGGTTATCT TERM 4069 2987140 - 2987155 + G 74 -7.5 -4.06419 | overlap 2987141 CTGGCGACACATTTC CCGGC TGGGCT GCCGG TTGTTTGTACCACCA ygcE 2986549 - 2988027 + | putative kinase TERM 4070 2988059 - 2988036 - T 72 -9.4 -3.21912 | overlap 2988037 TGCGTAAGTGAGGAA GGCCGGGCGG GAAA CTGCCCGGCA TGAACATACCTGAAT TERM 4071 2988058 - 2988037 - T 84 -12.9 -2.52933 | overlap 2988036 GCGTAAGTGAGGAAG GCCGGGCGG GAAA CTGCCCGGC ATGAACATACCTGAA TERM 4072 2988068 - 2988109 + T 75 -5.2 -4.77036 | opp_overlap 2988068, overlap 2988078 CCCGGCATGAACATA CCTGA-ATGGTTATCCCCGC TGAC GCGGGGA-ACTCATATCCGG TTTTTGCTGGTGGGC TERM 4073 2988482 - 2988442 - T 81 -9.4 -4.08279 | gap 1, opp_overlap 2988475, overlap 2988448 AGAGGCGACAAAGAA TATAAATGAGTAGAAGTCT TTAC AGA-TTCCACCCATTTATA ACGCTTATAAATGTT TERM 4074 2988475 - 2988495 + T 75 -8.5 -3.72893 | opp_overlap 2988448 2988442 TTTACAGATTCCACC CATTTATAA CGC TTATAAATG TTTAATCAGGCAATA ygcF 2989172 - 2988501 - | hypothetical protein TERM 4075 2989024 - 2989013 - G 70 -5.8 -4.1585 | CCAGAATGCTGAAAA GGGA GACT TCCC GATCCTCAAGCTTTT TERM 4076 2989116 - 2989103 - G 84 -3.7 -5.24551 | overlap 2989104 GTAAACGAATAAAAA TGGCG GGGA CGCCG GTAAAGTAACCCTCA ECS88_3042 2989345 - 2989947 + | hypothetical protein ygcG 2989931 - 2990854 + | hypothetical protein ECS88_3044 2990869 - 2992017 + | hypothetical protein ECS88_3046 2992011 - 2992916 + | hypothetical protein TERM 4077 2992932 - 2992951 + T 90 -9.2 -4.66609 | opp_overlap 2992932 2992933, overlap 2992933 CTCAACCATAAAAAA CGCCAGCC CGAA GGCTGGCA TTTTTAAATCAGATA TERM 4078 2992951 - 2992932 - T 100 -11.4 -5.37345 | opp_overlap 2992932 2992933, overlap 2992933 CTCAACCATAAAAAA CGCCAGCC CGAA GGCTGGCA TTTTTAAATCAGATA TERM 4079 2992950 - 2992933 - T 100 -12.7 -3.81322 | opp_overlap 2992932 2992933, overlap 2992932 TCAACCATAAAAAAC GCCAGCC CGAA GGCTGGC ATTTTTAAATCAGAT TERM 4080 2992933 - 2992950 + T 90 -12.7 -3.39483 | opp_overlap 2992933 2992932, overlap 2992932 TCAACCATAAAAAAC GCCAGCC CGAA GGCTGGC ATTTTTAAATCAGAT eno 2994274 - 2992976 - | enolase TERM 4081 2994317 - 2994345 + r 79 -11.7 -2.7458 | opp_overlap 2994319 2994322, overlap 2994316 CTGAAACTCCAGACA AACAACGCGTACC CAG GGTACGCGTTGCC GTTCTAACTTTTTTA TERM 4082 2994343 - 2994319 - R 100 -18.7 -4.07562 | opp_overlap 2994317 2994316, overlap 2994322 GAAACTCCAGACAAA CAACGCGTACC CAG GGTACGCGTTG CCGTTCTAACTTTTT TERM 4083 2994340 - 2994322 - R 100 -14.6 -4.15029 | opp_overlap 2994317 2994316, overlap 2994319 ACTCCAGACAAACAA CGCGTACC CAG GGTACGCG TTGCCGTTCTAACTT pyrG 2995999 - 2994362 - | CTP synthetase mazG 2997018 - 2996227 - | nucleoside triphosphate pyrophosphohydrolase TERM 4084 2996556 - 2996568 + g 74 -7.7 -4.11869 | opp_overlap 2996552 2996556 TCCAGTCGAAACCAA CGTTG GCG CAACG TTTCTGGATTTTTTG chpA 2997425 - 2997090 - | toxin of the ChpA-ChpR toxin-antitoxin system, endoribonuclease TERM 4085 2997352 - 2997332 - G 78 -11.1 -3.42699 | opp_overlap 2997334, overlap 2997334 ACGGACTCAGGACAA CAGCCGGAC GAT GTCCGGCTT GCTCGCTACCTTTTG TERM 4086 2997350 - 2997334 - G 95 -13.7 -3.28447 | opp_overlap 2997334, overlap 2997332 GGACTCAGGACAACA GCCGGAC GAT GTCCGGC TTGCTCGCTACCTTT TERM 4087 2997334 - 2997350 + g 89 -13.7 -3.19656 | opp_overlap 2997332 2997334 GGACTCAGGACAACA GCCGGAC GAT GTCCGGC TTGCTCGCTACCTTT chpR 2997673 - 2997425 - | antitoxin of the ChpA-ChpR toxin-antitoxin system relA 2999985 - 2997751 - | (p)ppGpp synthetase I/GTP pyrophosphokinase rumA 3001334 - 3000033 - | 23S rRNA (uracil-5)-methyltransferase TERM 4088 3001930 - 3001945 + G 72 -5.4 -4.56961 | AGAGATCTTTATTTC CAGCGT GATG ATGCTG TTTTGTATCGGTATT TERM 4089 3002263 - 3002242 - g 70 -4.3 -4.57569 | opp_overlap 3002243, overlap 3002243 GGATCTGGCGAAAAA GCGCGCC CAGGAAGC GGCGCGT ATTAAATCCGAGTTT TERM 4090 3003368 - 3003355 - g 71 -2.3 -5.02323 | overlap 3003350 TCATCACAAACAAAA CACGC TTTT GCCTG TAACCGATGAAAGTA barA 3001391 - 3004147 + | hybrid sensory histidine kinase, in two-component regulatory system with UvrY TERM 4091 3004337 - 3004368 + T 95 -10.9 -4.67943 | opp_overlap 3004343, overlap 3004343 GCGTTTGGCATCAGT CTCAAACCGGCTC CAGATA GAGCCGGTTTTGG TTTTCTGTCTTAACG TERM 4092 3004343 - 3004362 + T 95 -10.7 -4.75518 | opp_overlap 3004343, overlap 3004337 GGCATCAGTCTCAAA CCGGCTC CAGATA GAGCCGG TTTTGGTTTTCTGTC TERM 4093 3004362 - 3004343 - T 87 -11.4 -3.58343 | opp_overlap 3004343 3004337 GGCATCAGTCTCAAA CCGGCTCC AGAT AGAGCCGG TTTTGGTTTTCTGTC gudD 3005718 - 3004378 - | (D)-glucarate dehydratase 1 TERM 4094 3005197 - 3005221 + g 70 -10.7 -2.83403 | opp_overlap 3005200, overlap 3005196 ATGACGCAGGCGATA CCAGTCGCATG AGT CATCCGGCTGG CTTTGATACGGCAGC gudX 3007079 - 3005739 - | glucarate dehydratase TERM 4095 3007017 - 3007040 + g 79 -10.4 -3.85092 | gap 1, opp_overlap 3007011 ATTAAGCAACATGCT GTCATGTCCGG CGA CCGGA-ATGAC TTTCATATCAGTAAT gudP 3008433 - 3007081 - | putative D-glucarate transporter TERM 4096 3008603 - 3008585 - R 75 -4.4 -4.93898 | overlap 3008548 3008546 ATAGCAGTATAAAAA GCGCGCCA TAG CGGCTCAC CGTGCAACAACACAA yqcA 3009316 - 3008867 - | putative flavoprotein truC 3010116 - 3009334 - | tRNA pseudouridine synthase yqcC 3010445 - 3010116 - | hypothetical protein TERM 4097 3010496 - 3010525 + r 81 -10.7 -3.51411 | opp_overlap 3010498, overlap 3010492 3010497 TAGCAGGAATAAAAA AAGGGAGCACTGT ATTC ACAGTGCTCCCGG TTCGTTTCGCAGCAT TERM 4098 3010497 - 3010524 + r 87 -14.2 -2.70525 | opp_overlap 3010498, overlap 3010496 3010492 AGCAGGAATAAAAAA AGGGAGCACTGT ATTC ACAGTGCTCCCG GTTCGTTTCGCAGCA TERM 4099 3010523 - 3010498 - R 100 -17.7 -5.84381 | opp_overlap 3010497 3010496 3010492 GCAGGAATAAAAAAA GGGAGCACTGT ATTC ACAGTGCTCCC GGTTCGTTTCGCAGC syd 3011612 - 3011067 - | hypothetical protein TERM 4100 3012382 - 3012360 - g 71 -10.6 -2.86271 | opp_overlap 3012358 3012372 3012373, overlap 3012357 3012372 CCGTCATCACAACGA GTTCCACGAA CAG TGCGTGGAAC GCATCTTTAATGACC queF 3011680 - 3012528 + | NADPH-dependent 7-cyano-7-deazaguanine reductase ygdH 3012640 - 3014004 + | hypothetical protein TERM 4101 3014015 - 3014036 + F 91 -10.1 -4.72556 | overlap 3014033 CATAATCTCCCCTCC CCCGGTGAC GTTT GTTGCCGGG TTTTCTCGTTTTTGG sdaC 3014561 - 3015850 + | putative serine transporter TERM 4102 3015859 - 3015878 + F 90 -12.8 -3.27786 | overlap 3015871 3015873 CAGCTAAGTCCTTTC GCGCCGCT TTCG GGCGGCGC TTCCTCCGTTTTAAC TERM 4103 3016685 - 3016665 - g 72 -5.3 -4.4767 | opp_overlap 3016665 TCAGCCAGGATAAAA CCACCACTG ACC CGATGGCGG TTGTTGACTGGATCA sdaB 3015908 - 3017275 + | L-serine deaminase II TERM 4104 3017556 - 3017545 - g 75 -7.2 -4.30576 | overlap 3017547 TTTTGATGATGAAAA CCGC AGTA GCGG CTGGCGTCATCAGCG exo 3017297 - 3018142 + | exonuclease IX (5'-3' exonuclease) TERM 4105 3018195 - 3018229 + T 100 -14.3 -3.32963 | opp_overlap 3018205 3018208 TTTCATGCACTTATA TGCCGGATAAGACGC GGCTA GCGTCGCATCCGGCA TTATCACATCAGCGT fucO 3019398 - 3018247 - | L-1,2-propanediol oxidoreductase fucA 3020070 - 3019423 - | L-fuculose-1-phosphate aldolase TERM 4106 3020806 - 3020823 + G 77 -6.3 -4.62957 | gap 1 ACAAATTTCCAGGCT GGCCTGAT CCA ATC-GGCC TTTTACTTTGGTTAT fucP 3020617 - 3021933 + | L-fucose transporter TERM 4107 3021987 - 3021976 - g 93 -2.2 -5.65513 | CAGTAATGAAAAAAA TCAG CTTA CCGA AAATTGGTATCCGCC TERM 4108 3022692 - 3022676 - g 71 -3 -4.82901 | gap 1, overlap 3022678 CTGGGCTGATAAAAA CTTCCGC TATG GCG-AAG ATGAAAATAACAAAC fucI 3021966 - 3023741 + | L-fucose isomerase TERM 4109 3023806 - 3023833 + F 86 -12.9 -3.01791 | overlap 3023808 ACAAGCAAGAGTGGT TAGCCGGATAA GCAATG TTATCCGGCTA TATTGCAGGAGCGAT TERM 4110 3023808 - 3023831 + F 76 -11.1 -3.06696 | overlap 3023806 AAGCAAGAGTGGTTA GCCGGATAA GCAATG TTATCCGGC TATATTGCAGGAGCG fucK 3023820 - 3025268 + | L-fuculokinase fucU 3025270 - 3025692 + | L-fucose mutarotase TERM 4111 3025688 - 3025678 - f 77 -2.4 -5.40474 | ATTCTTTTAAAAAAA GGGG TAA CACC GTAATCTCATACCGG TERM 4112 3025705 - 3025725 + F 74 -9.6 -3.34043 | overlap 3025706 TAATCTCATACCGGT ACGCCCGC ATGAC GCGGGCGG TTATCGAATGATGGG TERM 4113 3025706 - 3025724 + F 84 -13.1 -2.60212 | overlap 3025705 AATCTCATACCGGTA CGCCCGC ATGAC GCGGGCG GTTATCGAATGATGG TERM 4114 3025998 - 3026016 + G 72 -11.6 -2.52464 | opp_overlap 3025997 GCATAAAGCAGATAT CGCGCGCG AGG CGCTCGCG TGGATTGAAGAAGGG fucR 3025750 - 3026481 + | DNA-binding transcriptional activator ygdE 3027625 - 3026525 - | putative methyltransferase ygdD 3028013 - 3027618 - | conserved hypothetical protein; putative inner membrane protein TERM 4115 3027986 - 3027972 - G 74 -8.5 -3.88603 | AGCTACAAAAATGAA GCCGC TAATG GCGGC GAAAATCAGCATAAA gcvA 3028949 - 3028032 - | DNA-binding transcriptional dual regulator TERM 4116 3029191 - 3029205 + r 93 -10 -5.17576 | opp_overlap 3029190 TGCGATTCAGACCAT GGTAGC AAA GCTACC TTTTTTCACTTCCTG TERM 4117 3029256 - 3029275 + r 100 -10.7 -5.86332 | opp_overlap 3029256 ATAGTGATTAATGTA GCACCGC CTAATT GCGGTGC TTTTTTTTACCTTGC TERM 4118 3029275 - 3029256 - R 74 -10.7 -2.57423 | opp_overlap 3029256 ATAGTGATTAATGTA GCACCGC CTAATT GCGGTGC TTTTTTTTACCTTGC ygdI 3029527 - 3029300 - | hypothetical protein csdA 3029719 - 3030924 + | cysteine sulfinate desulfinase ygdK 3030924 - 3031367 + | putative Fe-S metabolism protein (sufE-like) TERM 4119 3031376 - 3031413 + T 100 -12.7 -3.92542 | opp_overlap 3031376 3031377, overlap 3031377 3031379 GGTTTAAGCACAGAA CCAGGTCGGATAAGACG TTCG CGTCGCATCCGACCTGA TTGTTTACCCCTGAC TERM 4120 3031413 - 3031376 - T 100 -17.1 -3.59946 | opp_overlap 3031376 3031377 3031379, overlap 3031377 GGTTTAAGCACAGAA CCAGGTCGGATAAGACG TTCG CGTCGCATCCGACCTGA TTGTTTACCCCTGAC TERM 4121 3031412 - 3031377 - T 100 -18.4 -2.75647 | opp_overlap 3031377 3031376 3031379, overlap 3031376 GTTTAAGCACAGAAC CAGGTCGGATAAGACG TTCG CGTCGCATCCGACCTG ATTGTTTACCCCTGA TERM 4122 3031377 - 3031412 + T 100 -16.2 -2.95204 | opp_overlap 3031376 3031377, overlap 3031376 3031379 GTTTAAGCACAGAAC CAGGTCGGATAAGACG TTCG CGTCGCATCCGACCTG ATTGTTTACCCCTGA TERM 4123 3031379 - 3031410 + T 86 -13 -3.02639 | opp_overlap 3031377 3031376, overlap 3031377 3031376 TTAAGCACAGAACCA GGTCGGATAAGACG TTCG CGTCGCATCCGACC TGATTGTTTACCCCT ygdL 3032224 - 3031418 - | hypothetical protein TERM 4124 3031489 - 3031478 - G 70 -5.8 -4.23707 | overlap 3031486 AGAAACCGCAACAAA GCCA AAAG TGGC GGTCACCATCGTCGC TERM 4125 3032244 - 3032264 + r 82 -12.6 -2.8655 | opp_overlap 3032244 CCTCAGAATTAAAAA GGGTGAGG TTACC CCTCACCC TGTCATATCCGTAAA TERM 4126 3032264 - 3032244 - R 100 -12.6 -4.93365 | opp_overlap 3032244 CCTCAGAATTAAAAA GGGTGAGG TTACC CCTCACCC TGTCATATCCGTAAA mltA 3033398 - 3032301 - | membrane-bound lytic murein transglycosylase A TERM 4127 3033925 - 3033949 + H 93 -5 -5.54079 | gap 1, opp_overlap 3033925 TAGAATGCTGACAAA CCGCAAAGCTG CTAT TGGCTT-GCGG TTTTTTCGTTTTTAC ECS88_3083 3034518 - 3035039 + | hypothetical protein TERM 4128 3035063 - 3035034 - f 74 -10.9 -2.64099 | overlap 3035033 GCGCCGCAGGAGAAC GTTTAACCCGAAC ACGT ATTCAGGTTAAAC CGGAGAAGAAAGGAT TERM 4129 3035250 - 3035238 - g 82 -9.1 -4.15006 | AGATTTATGGCAAAA CAGCG AAA CGCTG GCTGATGCCTCACCC TERM 4130 3036181 - 3036192 + G 70 -5.8 -4.2008 | CGCGAATTTGAATTT GCCA ACCT TGGC TTTATTCCGCTCTCT ECS88_3084 3035092 - 3036636 + | hypothetical protein TERM 4131 3036676 - 3036707 + G 71 -9.4 -3.53012 | overlap 3036677 TTCATCGACCACTGT GGGCTGAGGGGACA TTCC TGTCCTCTCAGCAG TTTCAGCAGCAGGCC TERM 4132 3036677 - 3036706 + G 81 -12.9 -2.71712 | overlap 3036676 TCATCGACCACTGTG GGCTGAGGGGACA TTCC TGTCCTCTCAGCA GTTTCAGCAGCAGGC TERM 4133 3036835 - 3036853 + G 95 -11.7 -4.30576 | opp_overlap 3036835 CCGGAAAGCTGAAAA CGCAGGC AGTAC GCCTGCG TTTTGCTGATGGCAC TERM 4134 3036853 - 3036835 - g 95 -12.4 -4.24002 | opp_overlap 3036835 CCGGAAAGCTGAAAA CGCAGGCA GTA CGCCTGCG TTTTGCTGATGGCAC ECS88_3085 3036654 - 3037991 + | hypothetical protein TERM 4135 3038008 - 3037997 - g 82 -3 -5.21709 | GCGCACATGAAAAAA GATA TGGA TATC AATATCGATGCGCTG ECS88_3086 3037988 - 3038653 + | conserved hypothetical protein; putative membrane associated protein ECS88_3087 3038666 - 3040318 + | hypothetical protein ECS88_3088 3040376 - 3040867 + | hypothetical protein TERM 4136 3040875 - 3040896 + F 100 -14.5 -5.25699 | opp_overlap 3040872 CCGCCTGATAACTGC GGCAGACAG GAAA CTGTCTGCC TTTTTGTTGTGTGCT TERM 4137 3040900 - 3040957 + F 71 -10.1 -2.78816 | gap 1 AAACTGTCTGCCTTT TTGT-TGTGTGCTTTGTCCAGTGCCG CAGGCAC CGGTACTGAGCAAAGCATACCCACAA TCTGGTGAAACCTGA TERM 4138 3041695 - 3041683 - g 100 -10.5 -4.66609 | opp_overlap 3041690, overlap 3041685 GACGTGACGGAAAAA GCCCG CAG CGGGC GAATCGACCCGGTAT TERM 4139 3041795 - 3041772 - g 81 -8.9 -4.40561 | overlap 3041769 TCGCCGCAAAAACAA CCCGATTCT GGTGGG AGAACCGGG GGTGGGCAAAACCGC TERM 4140 3042874 - 3042860 - g 77 -8.5 -4.07568 | TGCGGGCGGCTAAAA CCGGC CTCAC GCCGG AGAACGGCCCACAGG ECS88_3089 3041059 - 3043704 + | ATPases with chaperone activity, ATP-binding subunit TERM 4141 3043808 - 3043759 - gf 85 -10.2 -4.22338 | gap 1, opp_overlap 3043774 ACCACAAGCTCAAAA TTCGCGGCCTG-AAAAGCCCG GTGGACGTG CTGACTTTTACAGGCCACGAA CAGCTCAGCTCACCC TERM 4142 3043931 - 3043976 + GF 78 -10.4 -3.60234 | gap 1, opp_overlap 3043930 GCCCGTACAGGGAAT GCCGGTACAGACTGCCCTGCG CACCC TGCACGGC-GTCATTACCGGC TTTAAACATCTCTCA TERM 4143 3045620 - 3045601 - gf 75 -5.6 -4.62336 | overlap 3045602 AGGTTACGCCAAAAA GCCTGCAG CTGT CCGCAGGA GAAAACATCATTAGC TERM 4144 3045619 - 3045602 - gf 71 -9.1 -3.3692 | overlap 3045601 GGTTACGCCAAAAAG CCTGCAG CTGT CCGCAGG AGAAAACATCATTAG ECS88_3090 3043716 - 3046196 + | hypothetical protein TERM 4145 3047165 - 3047182 + GF 77 -3.4 -5.03314 | TCTTAGGTCGTAATG CAGCTG AAATGG TAGCTG TTTTTTCCCAGTCGC ECS88_3091 3046168 - 3047382 + | hypothetical protein ECS88_3092 3047361 - 3047975 + | hypothetical protein ECS88_3093 3047950 - 3048783 + | hypothetical protein ECS88_3094 3048752 - 3049045 + | hypothetical protein ECS88_3096 3049660 - 3050907 + | hypothetical protein TERM 4146 3051428 - 3051418 - gf 95 -6.8 -5.40474 | opp_overlap 3051427 ACCGCCTTAAAAAAA CTGC GCC GCAG CCGTCCGCTGGACGG TERM 4147 3051427 - 3051445 + GF 70 -10.2 -2.62616 | opp_overlap 3051418 AAAAAACTGCGCCGC AGCCGTCC GCT GGACGGCA TCATCTGGCCGCTGA TERM 4148 3051710 - 3051725 + GF 73 -10.4 -2.98493 | overlap 3051707 GCATGTCGCAACTGC TGGCGG ATAA CCGCCA TGATTTCCTGCTGCG TERM 4149 3052410 - 3052422 + GF 72 -4.7 -4.65895 | opp_overlap 3052410 TTCCCGCCCGGAAAA GGCCG ACG CTGCC TTTTTCAGTACCACG TERM 4150 3054231 - 3054189 - gf 70 -4 -4.62069 | gap 1, opp_overlap 3054195, overlap 3054191 GCTGGAGCTGAAAAA CTTCCGCCTGCCGGGACAG GTATTT CTGAC-CGGCAGGAGTATG AAGGATGCGGAAGAG ECS88_3097 3050917 - 3054270 + | hypothetical protein ECS88_3098 3054236 - 3055873 + | hypothetical protein TERM 4151 3055928 - 3055916 - g 75 -6.9 -4.37886 | overlap 3055919 TCAGGGGGGACAAAA CCACC TGC GGCGG GAAGATTATTGAAGG TERM 4152 3056104 - 3056118 + G 82 -9.2 -4.2123 | AGCCAGAGCAGTTGC CCGTGC AAG GCGCGG TTTATTGCGTCAATG TERM 4153 3057263 - 3057243 - g 74 -6.2 -4.46652 | gap 1, overlap 3057251 3057256 TAAAGAAAAAGCAAA GGGGAATAC TGAA GT-TTCCCC TCCAGTGAAACCAGA ECS88_3099 3055873 - 3057456 + | hypothetical protein TERM 4154 3057483 - 3057508 + G 77 -8.3 -4.08706 | overlap 3057487 AGAAAATGGTATTAC GCAGTGACGAC ATCT GTCGTCATTAC TTTGTGTGGTGGAGG TERM 4155 3057487 - 3057504 + G 77 -9.9 -3.66365 | overlap 3057483 AATGGTATTACGCAG TGACGAC ATCT GTCGTCA TTACTTTGTGTGGTG ECS88_3100 3057444 - 3058085 + | hypothetical protein TERM 4156 3059290 - 3059315 + GF 79 -4 -5.14563 | gap 1 GCACGCGATCCCTAT GTGGAGCGCCT GTTCG AGG-GCTTCGC TTTTTTAATGGGCCG ECS88_3102 3059155 - 3060915 + | hypothetical protein TERM 4157 3061017 - 3061036 + GF 70 -7 -4.08216 | opp_overlap 3061016 3061017, overlap 3061021 GGCAGTACCGACAAC CCCGCCGC CGAT GCGGTGCG TTTTCGCCCCCATCC TERM 4158 3061579 - 3061562 - gf 76 -4.1 -5.00616 | GGGTCTGTCAAAAAA TTCACGC ATCA GCCTGAA AACGCGAACGCTGCT TERM 4159 3061682 - 3061719 + GF 70 -6.9 -4.05033 | gap 1 TGGCTGGCTGCCCGG CGGGCAACTGCAC-AGCG ATT TGCTGGTGCTGCTGCGCG TTTATCTGGGCTGGC ECS88_3103 3060870 - 3061958 + | hypothetical protein ECS88_3104 3061939 - 3062475 + | hypothetical protein ECS88_3105 3062479 - 3062907 + | hypothetical protein ECS88_3106 3062907 - 3064283 + | hypothetical protein TERM 4160 3064551 - 3064527 - T 91 -11.5 -3.90328 | opp_overlap 3064527 TAGAATGCTGACAAA CCGCAATGTGT TCT ACAAATTGCGG TTTTTTTGTATTTAA TERM 4161 3064527 - 3064551 + T 100 -11.5 -5.88197 | opp_overlap 3064527 TAGAATGCTGACAAA CCGCAATGTGT TCT ACAAATTGCGG TTTTTTTGTATTTAA ECS88_3107 3065541 - 3064585 - | 2-hydroxyacid dehydrogenase TERM 4162 3064989 - 3065007 + g 78 -9.6 -3.86346 | opp_overlap 3064992, overlap 3064992 CTCCAGCTTTGTCAG CAACCTGA TAG TCGGGTTG TTTGTCAAAAGCTAA TERM 4163 3065574 - 3065555 - R 72 -7.8 -3.94188 | overlap 3065556 ACTCACTTCAAAGAA CGCCACCC CAAA AGATGGCG TGACCGGTTACTGTA ECS88_3108 3066200 - 3065604 - | putative phosphosugar isomerase ECS88_3109 3067378 - 3066203 - | putative aminotransferase TERM 4164 3067085 - 3067064 - G 85 -11.7 -3.65224 | opp_overlap 3067058 ATGCGATGTCAATAA CTCTATTGC TTTT GCAATAGAG TACATCACACTGGGG ECS88_3110 3068958 - 3067378 - | Phosphotransferase system system, maltose and glucose-specific IIABC component ECS88_3111 3069871 - 3068990 - | putative transcription antiterminator TERM 4165 3069692 - 3069679 - G 100 -8.1 -5.36441 | TTCTGACATAAAAAA TCCGG TTAG CCGGA TGCTCAGGGACCGAC TERM 4166 3069880 - 3069835 - G 100 -13.5 -6.06723 | gap 1, opp_overlap 3069832 3069835 GGCTCCAAAAAAAAA GGCAAGGC-ACGTCAGAAGTAA TAA CTACTTCAAACATTGCCTTGCC TGATTTAACAGTTAC amiC 3071325 - 3070072 - | N-acetylmuramoyl-L-alanine amidase TERM 4167 3070384 - 3070394 + g 81 -8.2 -4.4078 | opp_overlap 3070384 GGTGTGGTCGACATA GCGG TCA CCGC TTTTGCTTACGCCAC TERM 4168 3070665 - 3070689 + g 70 -3.5 -4.61527 | TCAGAGAGCGCAGAC GGCGAGCTATT TGC AATACCACGTC TTTTTCGCGCGTTTT TERM 4169 3072849 - 3072834 - g 73 -4 -4.8048 | GCCCGAGAGCAAAAA GCAGTT GTAC AACTAC CAGCGTAAATCCAAA argA 3071557 - 3072888 + | fused acetylglutamate kinase homolog (inactive) ; amino acid N-acetyltransferase TERM 4170 3072943 - 3072899 - T 84 -8.5 -4.30978 | opp_overlap 3072899, overlap 3072901 GGTAAGCGATGAAAA TCGCCGGATGCGACATGCG TAACACT CGTGCGTCGCATCAGGCAA TTACGTTTATCCCCG recD 3074776 - 3072950 - | exonuclease V (RecBCD complex), alpha chain TERM 4171 3073688 - 3073704 + g 79 -4.3 -5.00616 | opp_overlap 3073686 ACCAATGCCAGAATC GCTGCCG AAA CGATAGC TTTTTTGCAGCAGGC TERM 4172 3074480 - 3074458 - G 70 -4.8 -4.46112 | TGCGATTCAAATAAA GACGATCGCC ACA GAGGATCATC GGCGTTGGTTCATCT recB 3078318 - 3074776 - | exonuclease V (RecBCD complex), beta subunit TERM 4173 3074922 - 3074907 - G 70 -6 -4.21954 | overlap 3074904 3074908 GGAACAGATAAATAA CGCCGC CAAA GTGGCG CTCATAGTCGTAATC TERM 4174 3075768 - 3075780 + g 76 -9.1 -3.75505 | AGGTACGAAGCCCTG CCGCA TCT TGCGG TTCTCCTTTTTGCAG TERM 4175 3077277 - 3077289 + g 74 -6.2 -4.57569 | overlap 3077276 3077284 CATCAAAACCCAATT CGCC ACGGC GGCG TTTTTCACGCGCTAC TERM 4176 3077400 - 3077421 + g 76 -9.3 -3.76379 | CCTCAAACAGTGGAT GTCGCGGGG TTTC CCCCCCGGC TTTCGTGCGATCTTC TERM 4177 3078186 - 3078172 - G 71 -9.2 -3.53224 | overlap 3078183 CAGCGGGCGGGGAAA GGCGGC AGA ACCGCC TAGTCCAAGTAACAG TERM 4178 3078287 - 3078261 - G 90 -14.4 -2.72049 | CAGAGGCTTCAATCA GGCGCTCGCCCT GTA AGGGCAAGCGCA AAGGATCTAGTGTCT ptr 3081199 - 3078311 - | protease III TERM 4179 3078941 - 3078952 + g 74 -5.8 -4.58395 | CAGTGCGGAGTCGGT GCTG TTAC CAGC TTTTTCAAAGATGAC TERM 4180 3080385 - 3080413 + g 84 -3.7 -5.28755 | overlap 3080380 3080386 3080393 ATGCCCTTTTGCGCG TCGGTGACTACCG GCA CGGTGATTTCCGG TTTTTTGCTCTCTTT recC 3084743 - 3081375 - | exonuclease V (RecBCD complex), gamma chain TERM 4181 3081764 - 3081752 - G 78 -5.5 -4.82901 | CTTTGCGTAGAAAAA GGCGA CTT TCACC ATTACCACCGCTGGC TERM 4182 3083788 - 3083770 - G 70 -4.4 -4.45083 | opp_overlap 3083773 GTCACATCGACAAAA GCGTCCAG CTC CTGGCTGC TCTCCAGGTCAGAAA ppdC 3085079 - 3084756 - | prepilin peptidase-dependent protein C precursor ygdB 3085471 - 3085064 - | hypothetical protein TERM 4183 3085145 - 3085132 - G 74 -3.1 -5.00616 | CGCGTGGCGAAAAAA CAATG TTTC CATCG ATGACTTCGCCTGTT ppdB 3086031 - 3085468 - | prepilin peptidase-dependent protein B ppdA 3086492 - 3086022 - | prepilin peptidase-dependent protein A TERM 4184 3086655 - 3086636 - R 100 -10.7 -5.78622 | GGAGGGCAAAAAAAA CCGACGC ACACTG GCGTCGG CTCTGGCAGGATGTT thyA 3087471 - 3086677 - | thymidylate synthetase TERM 4185 3087344 - 3087314 - G 72 -11.1 -3.09516 | TCGTGGATGATGGAA CGCAGGTGGCAAC GTTTA GTTGTCACCAGCG GGAATCCATCCTGCA lgt 3088353 - 3087478 - | phosphatidylglycerol-prolipoprotein diacylglyceryl transferase ptsP 3090750 - 3088504 - | fused PTS enzyme: PEP-protein phosphotransferase (enzyme I) ; GAF domain containing protein nudH 3091293 - 3090763 - | nucleotide hydrolase TERM 4186 3091935 - 3091950 + H 77 -4.7 -5.04249 | TACACTGCGAATATT CAGCA CATAAT TGCTG TTTGTTTTTTAACCA TERM 4187 3092231 - 3092216 - g 76 -7.6 -4.27316 | opp_overlap 3092216 3092214 GCGTGGAACTTAAAA CTATCC CTGT GGATAG TCTTGGTCGTCCACT TERM 4188 3092589 - 3092607 + G 71 -3.1 -4.86731 | gap 1, overlap 3092596 CCGGGGCGAACGGAT TCTGACGC TGCC GCG-CGGA TTTTATTTGAAGAAG mutH 3091978 - 3092667 + | methyl-directed mismatch repair protein ygdQ 3092736 - 3093449 + | conserved hypothetical protein; putative inner membrane protein ygdR 3093587 - 3093805 + | hypothetical protein TERM 4189 3093834 - 3093810 - f 80 -8.6 -4.20918 | opp_overlap 3093809 3093808, overlap 3093813 TTGAACGTTAACAAA TAAGGTCAGC ATCCG GCTGGCCTTA AGATTTTTCTCTTTC TERM 4190 3094739 - 3094729 - g 93 -8.2 -4.82855 | opp_overlap 3094728 3094726, overlap 3094731 GAGCAAACGCAAAAA GCCG TCG CGGC GTATGTTGATATCGC tas 3093913 - 3094953 + | putative oxidoreductase, NADP(H)-dependent aldo-keto reductase TERM 4191 3094955 - 3094982 + T 86 -12.8 -3.13403 | opp_overlap 3094956 3094960 3094972, overlap 3094960 ATCCTGCACCATAAG ATTAACGCCGGT TAAA ACCGGCGTTAAA TATTAATGACGGCGC TERM 4192 3094981 - 3094956 - T 100 -16.3 -3.27475 | opp_overlap 3094955 3094960, overlap 3094960 3094972 TCCTGCACCATAAGA TTAACGCCGGT TAAA ACCGGCGTTAA ATATTAATGACGGCG TERM 4193 3094977 - 3094960 - T 93 -12.7 -3.43203 | opp_overlap 3094955 3094960, overlap 3094956 3094972 GCACCATAAGATTAA CGCCGGT TAAA ACCGGCG TTAAATATTAATGAC TERM 4194 3094960 - 3094977 + T 86 -12.7 -3.20348 | opp_overlap 3094960 3094956 3094972, overlap 3094955 GCACCATAAGATTAA CGCCGGT TAAA ACCGGCG TTAAATATTAATGAC TERM 4195 3095019 - 3094989 - T 73 -9 -3.45571 | opp_overlap 3094992, overlap 3094972 3094983 3094992 GGCGTTAAATATTAA TGACGGCGCTGC CAGATCC ACAGCGCCGTTA TTGCCAGCGCAAACA TERM 4196 3094992 - 3095016 + T 78 -10 -3.61398 | opp_overlap 3094972 3094989 3094983 3094992 GTTAAATATTAATGA CGGCGCTG CCAGATCCA CAGCGCCG TTATTGCCAGCGCAA TERM 4197 3095016 - 3094992 - T 75 -10.7 -2.8742 | opp_overlap 3094992, overlap 3094972 3094989 3094983 GTTAAATATTAATGA CGGCGCTGC CAGATCC ACAGCGCCG TTATTGCCAGCGCAA ygeD 3096178 - 3094985 - | conserved hypothetical protein; putative inner membrane protein TERM 4198 3095515 - 3095502 - G 75 -6.7 -4.30719 | GCTCCCCAGAATAAA CTGGT GCCC ACCAG CGAAAAACGCGTTTC aas 3098330 - 3096171 - | fused 2-acylglycerophospho-ethanolamine acyl transferase ; acyl-acyl carrier protein synthetase TERM 4199 3098426 - 3098443 + H 86 -12.7 -3.14211 | opp_overlap 3098426 AGGTGCGAAAAAAAA CCTGCGC ATCC GCGCAGG TTGGTGCAAGAGACT TERM 4200 3098443 - 3098426 - H 100 -12.7 -5.75945 | opp_overlap 3098426 AGGTGCGAAAAAAAA CCTGCGC ATCC GCGCAGG TTGGTGCAAGAGACT TERM 4201 3098646 - 3098629 - H 100 -12.7 -6.07627 | opp_overlap 3098628 3098625 3098635 ACCGGCAAAAAAAAA CCTGCGC ATCT GCGCAGG CTGGTGTAATTCATG TERM 4202 3098845 - 3098865 + H 88 -11.1 -4.18494 | opp_overlap 3098843 ACAATGAAAACACGC CGCCCCTTG AAC CAACGGGCG TTTTCCGTAACACTG TERM 4203 3099170 - 3099184 + G 93 -3.6 -5.5604 | GGTCGAACAGGTGGC TTATCA CAC TGGTAA TTTTTTATTGATTGG galR 3098916 - 3099947 + | DNA-binding transcriptional repressor lysA 3101216 - 3099954 - | diaminopimelate decarboxylase, PLP-binding lysR 3101338 - 3102273 + | DNA-binding transcriptional dual regulator ygeA 3102952 - 3102260 - | putative racemase TERM 4204 3103074 - 3103048 - R 100 -18.8 -5.30155 | CTATTAACGAAAAAA GGGCCGGATGTA CAG CACATCCGGCCC GTGAAATCAGACGCC araE 3104499 - 3103081 - | arabinose transporter TERM 4205 3104556 - 3104538 - R 77 -4.6 -5.14477 | overlap 3104540 3104541 GACATAGTGAAAAAA TACGTGAA CAA TTCACACA GGTGTCAGGTCGGAA TERM 4206 3104791 - 3104774 - R 100 -12.7 -5.29782 | TACAGGTATAAAAAA CCCTGCC ATGC GGCAGGG TCATAAAAGTAAGAG kduD 3105575 - 3104814 - | 2-deoxy-D-gluconate 3-dehydrogenase TERM 4207 3105418 - 3105403 - G 93 -8.2 -5.03314 | GTCAGGCTTAAAAAA CGACGC CCCA GCGCCG TGACCTGCTTGATGG kduI 3106441 - 3105605 - | 5-keto 4-deoxyuronate isomerase TERM 4208 3106386 - 3106401 + g 72 -4.6 -4.65895 | overlap 3106388 AATTCATTGCGCAGC CCCTGG GTAT CCAGCG TTTTTGCGTGCGCAC TERM 4209 3106487 - 3106501 + r 73 -5 -4.60797 | opp_overlap 3106484 3106481 3106487 3106488, overlap 3106488 AATAGAAAACAACAA TGAAAC ACT GTTTCG TTTTCTCTATGAGGG TERM 4210 3106646 - 3106633 - R 80 -6.7 -4.78752 | ATGAGAATGGAAAAA TCAGG GTGC CCTGA AAAGGTATGTCGACT yqeF 3107909 - 3106728 - | Acetyl-CoA acetyltransferase TERM 4211 3107996 - 3107983 - H 81 -3.1 -5.41746 | AATTGTTTAAAAAAA GTGAC TATT ATCAC AAAGGAAATACGCCT TERM 4212 3108205 - 3108188 - g 78 -8.5 -4.17316 | ATTTGGTCAAAAGAA GAAACTC TGTG GAGTTTC GCGCTCTACGGCACA yqeG 3108164 - 3109393 + | putative transporter TERM 4213 3109400 - 3109441 + T 100 -17.7 -4.35461 | gap 1, opp_overlap 3109418, overlap 3109401 TTTAGCTAATATCCG TTGTGGATGGTTCAAAATTG CTT CAATTTTGAACCATCC-CAG TTTTCATAATGTTCA TERM 4214 3109401 - 3109440 + T 100 -19 -3.20553 | gap 1, opp_overlap 3109418, overlap 3109400 TTAGCTAATATCCGT TGTGGATGGTTCAAAATTG CTT CAATTTTGAACCATCC-CA GTTTTCATAATGTTC ygeR 3110617 - 3109862 - | Tetratricopeptide repeat transcriptional regulator TERM 4215 3111217 - 3111235 + G 88 -8.8 -4.65895 | opp_overlap 3111208, overlap 3111219 GAACAAGCCAGGAGT TTGCCGGG CGT CCTGGCGA TTTTTACCTGGGAAG TERM 4216 3112634 - 3112663 + G 76 -10.7 -3.38812 | gap 1, overlap 3112632 3112635 CACGTCAGAGCTATG TTGCCGCGCCTGCG CTG CGCAG-TGCGGCAC TGTTATTAAAAGAGA TERM 4217 3112635 - 3112662 + G 84 -14.2 -2.63073 | gap 1, overlap 3112634 3112632 ACGTCAGAGCTATGT TGCCGCGCCTGCG CTG CGCAG-TGCGGCA CTGTTATTAAAAGAG TERM 4218 3112723 - 3112682 - g 80 -5.2 -4.91977 | gap 1, overlap 3112713 TATTAAAAGAGAAAA TCATCGCTCAC-GCCGCAG TCATG CTACATCAGTCAGCGATGA ATCTGACCCTGATAA xdhA 3111070 - 3113328 + | xanthine dehydrogenase, molybdenum binding subunit xdhB 3113339 - 3114217 + | xanthine dehydrogenase, FAD-binding subunit xdhC 3114214 - 3114693 + | xanthine dehydrogenase, Fe-S binding subunit TERM 4219 3114727 - 3114696 - T 93 -10.8 -4.5528 | opp_overlap 3114701, overlap 3114697 3114701 GAAAACGAAGTAAAA GGATATCCGGCCTG AATT CAGGCCGGATTCTC AGAGGTTATGTGTTT TERM 4220 3114725 - 3114697 - T 100 -14 -3.31541 | gap 1, opp_overlap 3114701, overlap 3114696 3114701 AAAACGAAGTAAAAG GATATCCGGCCTG AATT CAGGCCGGAT-TC TCAGAGGTTATGTGT TERM 4221 3114722 - 3114701 - T 100 -15.9 -3.14708 | opp_overlap 3114701, overlap 3114697 3114696 CGAAGTAAAAGGATA TCCGGCCTG AATT CAGGCCGGA TTCTCAGAGGTTATG TERM 4222 3114701 - 3114722 + T 100 -15.9 -3.31799 | opp_overlap 3114697 3114696 3114701 CGAAGTAAAAGGATA TCCGGCCTG AATT CAGGCCGGA TTCTCAGAGGTTATG ygeV 3116511 - 3114733 - | putative DNA-binding transcriptional regulator TERM 4223 3117135 - 3117125 - g 70 -6.8 -4.07568 | GCCGCCGCGTTAAAA GCAC TGC GTGC TGAAAACATCTCAAC TERM 4224 3117306 - 3117282 - g 70 -6.3 -4.2331 | AAGGAAAATCACAAA TCGCTCACGGC GAA ACCGTGCGTGA AACCGCCAATATGAT TERM 4225 3117594 - 3117558 - g 100 -7.3 -5.58209 | overlap 3117560 TGAAAGGTAAAAAAA TCGCCATGACCTGGG CCTACTC CCCAAGCTATGGCAA ACCGCTCTCTGTACC ygeW 3116987 - 3118177 + | hypothetical protein TERM 4226 3118184 - 3118205 + F 93 -13.7 -3.24232 | overlap 3118182 GTGAAATAACCCCTC GGGCCGATC AGCT GGTCGGCCC TCTATTTCCAGAGGC TERM 4227 3118336 - 3118325 - g 70 -5.8 -4.22346 | overlap 3118314 3118318 3118315 3118326 CAAAGCCAGGCAAAA CTGG CACG CCAG TTCCACCAGAAAATT TERM 4228 3118523 - 3118511 - g 70 -4.9 -4.57569 | opp_overlap 3118519 TTATTGTGTGAAAAA TATCA TCT TGATA TCGAAACGCTGTCAT ygeX 3118235 - 3119431 + | 2,3-diaminopropionate ammonia-lyase ygeY 3119489 - 3120700 + | putative peptidase TERM 4229 3120718 - 3120737 + F 100 -15 -4.71482 | ACTCTTCACTTATCC CCCTCCGG TTCG CCGGAGGG TTTTTGGAGTTTGCT TERM 4230 3120792 - 3120773 - g 79 -2.1 -5.28176 | overlap 3120775 CGTATTGATAAAAAA CGGCATT GTTGTT AATGCAG ATGGACAGGCGAAGC hyuA 3120753 - 3122138 + | D-stereospecific phenylhydantoinase yqeA 3122186 - 3123118 + | amino acid (carbamate) kinase TERM 4231 3123124 - 3123151 + T 100 -12.7 -4.54727 | opp_overlap 3123125, overlap 3123125 TTGTCAGTAATTTAA AGGCCGGATGG GTAATA CCATCCGGCCA TTTTCATTTAAGCCA TERM 4232 3123125 - 3123150 + T 100 -16.2 -3.32354 | opp_overlap 3123125, overlap 3123124 TGTCAGTAATTTAAA GGCCGGATGG GTAATA CCATCCGGCC ATTTTCATTTAAGCC TERM 4233 3123150 - 3123125 - T 100 -16.2 -3.78329 | opp_overlap 3123124 3123125 TGTCAGTAATTTAAA GGCCGGATGG GTAATA CCATCCGGCC ATTTTCATTTAAGCC yqeB 3124784 - 3123159 - | conserved hypothetical protein; putative NAD(P)-binding Rossman fold TERM 4234 3124828 - 3124814 - R 70 -9.2 -3.14683 | opp_overlap 3124810 ATATCCTTTCAGTAA CCCGGA ATA CCCGGG CCGCTAATTCACAAA yqeC 3125602 - 3124832 - | hypothetical protein TERM 4235 3124975 - 3124962 - G 74 -3.1 -4.89852 | overlap 3124963 TCACATTGAGAAAAA CGGTT AATG AACCA GACTCGCCGACAACC TERM 4236 3125026 - 3125009 - G 71 -9.1 -3.54424 | gap 1 CGGTACGTTTTTAAA CGCC-CCC TGA GGGTGGCG AACCAGCGCAACGAG TERM 4237 3125165 - 3125175 + g 72 -6.8 -4.2349 | opp_overlap 3125157 3125164 CATCACAGCAATCAC GCAG CAA CTGC TTTTAGGTATGCAAG ygfJ 3125706 - 3126284 + | hypothetical protein TERM 4238 3127718 - 3127728 + G 73 -4 -4.78107 | TGCCAGTCAGCTGAC TATC CGC GATA TTTTTGATACTGGTA TERM 4239 3128741 - 3128721 - g 71 -3.2 -4.84359 | opp_overlap 3128722 3128725, overlap 3128722 3128725 CCAGGCGTAGAAAAA GCAACGGT CGTTT ACCGTCGT TCACTGCAAGAGATG ygfK 3126606 - 3129704 + | putative oxidoreductase, Fe-S subunit TERM 4240 3130122 - 3130132 + G 81 -6.8 -4.62471 | GGTCGCTCTCCACAT TGCG CAA CGCA TTTTTAAAAGTTGGC TERM 4241 3130297 - 3130312 + G 85 -11.8 -3.60098 | GGTGGAAGCTCATAT CGGCGC TCAC GCGCCG TTTACCGTGCCGGAT ssnA 3129707 - 3131035 + | putative chlorohydrolase/aminohydrolase TERM 4242 3131074 - 3131040 - f 74 -7.9 -4.06419 | overlap 3131042 3131043 CGCTGGCATAAATAA CAGCTCCCCTCTTCT TTCAG AGAAGAGGGGAAATT AAGGAAAGACGATGA TERM 4243 3131072 - 3131042 - f 78 -10.5 -3.62695 | overlap 3131040 3131043 CTGGCATAAATAACA GCTCCCCTCTTCT TTCAG AGAAGAGGGGAAA TTAAGGAAAGACGAT TERM 4244 3131071 - 3131043 - f 86 -14 -2.77135 | overlap 3131042 3131040 TGGCATAAATAACAG CTCCCCTCTTCT TTCAG AGAAGAGGGGAA ATTAAGGAAAGACGA ygfM 3131086 - 3131865 + | putative oxidoreductase xdhD 3131862 - 3134732 + | fused putative xanthine/hypoxanthine oxidase: molybdopterin-binding subunit ; Fe-S binding subunit TERM 4245 3134758 - 3134741 - f 84 -8.3 -4.39107 | opp_overlap 3134740 3134742, overlap 3134742 AATATAAGTAATAAA TGGCCGC TTCG GCGGCCT GTTTCTCTGTTTGAA TERM 4246 3134742 - 3134757 + F 93 -11.8 -3.73323 | opp_overlap 3134742 3134741, overlap 3134740 ATATAAGTAATAAAT GGCCGC TTCG GCGGCC TGTTTCTCTGTTTGA TERM 4247 3134757 - 3134742 - f 83 -11.8 -3.21837 | opp_overlap 3134740 3134742, overlap 3134741 ATATAAGTAATAAAT GGCCGC TTCG GCGGCC TGTTTCTCTGTTTGA ygfO 3134897 - 3136297 + | putative transporter guaD 3136312 - 3137631 + | guanine deaminase TERM 4248 3138670 - 3138654 - g 73 -11.5 -2.77182 | overlap 3138651 3138664 GTTTATATCGAATCA GCGGCAG GAA CCGCCGC CGGGGGGAAAACCGG ygfQ 3137667 - 3139034 + | putative transporter TERM 4249 3139064 - 3139039 - T 78 -11.1 -3.1352 | opp_overlap 3139040, overlap 3139037 3139035 GGGCAATCTAATAGA TTCTCCGCGCC TTTC AGCGCGGAGAT TTCTTTCACAGAGGA TERM 4250 3139040 - 3139063 + T 100 -13.9 -4.41348 | opp_overlap 3139039 3139037 3139035 GGCAATCTAATAGAT TCTCCGCGC CTTTCA GCGCGGAGA TTTCTTTCACAGAGG ygfS 3139558 - 3139070 - | putative oxidoreductase, 4Fe-4S ferredoxin-type subunit ygfT 3141477 - 3139558 - | fused putative oxidoreductase: Fe-S subunit ; nucleotide-binding subunit TERM 4251 3140993 - 3141006 + g 78 -8.1 -4.30844 | CTGCGAGATGGCTGA GCGTC TGAT GACGC TTTTCCTGCTGCCGT TERM 4252 3141759 - 3141775 + H 83 -10.9 -3.60661 | GTTCTCTTCTCATTT TCGTGGT TTA ACCACGA TTATGTGATTGCCTC ECS88_3166 3141780 - 3141968 + | hypothetical protein ygfU 3141913 - 3143361 + | transporter idi 3143611 - 3144159 + | isopentenyl diphosphate isomerase TERM 4253 3144181 - 3144164 - T 100 -10.5 -5.64421 | opp_overlap 3144164 AGCTTAAATAAAAAA CCCCGAC GGTT GCCGGGG TTGTGAGCATAACGT lysS 3145719 - 3144202 - | lysine tRNA synthetase, constitutive prfB 3146827 - 3145729 - | peptide chain release factor RF-2 TERM 4254 3146820 - 3146834 + g 74 -2.8 -4.87892 | TTTACCGGATTAATT TCAAAC ATG GTCTGA TTTCTTTTATTGAGC TERM 4255 3146870 - 3146896 + r 100 -11.7 -5.24129 | gap 1, opp_overlap 3146870 AAAATGCGGTGATAA GAGCG-GGATTG TACC CAATCCACGCTC TTTTTTATAGAGAAG TERM 4256 3146896 - 3146870 - R 85 -11.7 -3.30903 | gap 1, opp_overlap 3146870 AAAATGCGGTGATAA GAGCG-GGATTG TACC CAATCCACGCTC TTTTTTATAGAGAAG recJ 3148651 - 3146918 - | ssDNA exonuclease, 5'--> 3'-specific TERM 4257 3148052 - 3148040 - G 70 -4.7 -4.58395 | CTGATCGCGCAAAAA GGTGC GCA GCGCC AGCATCAGATAAAAC dsbC 3149367 - 3148657 - | protein disulfide isomerase II TERM 4258 3148860 - 3148870 + g 84 -4 -5.19879 | CTGCCATCACATCAT CAAA CGC TTTG TTTTTATCTTTCGCA xerD 3150288 - 3149392 - | site-specific tyrosine recombinase fldB 3150400 - 3150921 + | flavodoxin 2 TERM 4259 3150928 - 3150957 + T 95 -8.5 -5.20783 | TACGCCTGATGTCAC TGACGGCTTAGCG CATA TGCTTTGCCGTCA TTTTTATCTTTGCGT ygfX 3151368 - 3150961 - | hypothetical protein ygfY 3151615 - 3151349 - | hypothetical protein ygfZ 3151858 - 3152838 + | enzyme component involved in 2-methylthio-6-iodeadenosine formation TERM 4260 3152883 - 3152840 - T 79 -8.9 -3.92324 | gap 1, opp_overlap 3152838 3152841 3152842 3152845 3152875, overlap 3152841 CGCTGGAAGAGTAAA TCTCTGTATCGCATCAGGCA TTTAT CGCCTGATGCGACACTG-GT GTGTCTTTTCAGGCC TERM 4261 3152882 - 3152841 - T 82 -12.4 -2.95073 | gap 1, opp_overlap 3152841 3152838 3152842 3152845 3152875, overlap 3152840 GCTGGAAGAGTAAAT CTCTGTATCGCATCAGGCA TTTAT CGCCTGATGCGACACTG-G TGTGTCTTTTCAGGC TERM 4262 3152842 - 3152882 + T 83 -11.9 -3.26779 | opp_overlap 3152841 3152840, overlap 3152841 3152838 3152845 3152875 CTGGAAGAGTAAATC TCTGTATCGCATCAGGC ATTTATC GCCTGATGCGACACTGG TGTGTCTTTTCAGGC TERM 4263 3152845 - 3152879 + T 87 -14.4 -2.80859 | opp_overlap 3152841 3152840, overlap 3152842 3152841 3152838 3152875 GAAGAGTAAATCTCT GTATCGCATCAGGC ATTTATC GCCTGATGCGACAC TGGTGTGTCTTTTCA TERM 4264 3152875 - 3152888 + T 70 -6.7 -4.09685 | opp_overlap 3152841 3152840, overlap 3152845 3152842 3152841 3152838 TTTATCGCCTGATGC GACAC TGGT GTGTC TTTTCAGGCCTACAA yqfA 3153574 - 3152915 - | putative hemolysin, inner membrane subunit yqfB 3154049 - 3153738 - | hypothetical protein bglA 3154088 - 3155527 + | 6-phospho-beta-glucosidase A TERM 4265 3155654 - 3155667 + T 81 -9.5 -3.90318 | opp_overlap 3155654 TTAACAAGCGAAAAA GGCGC CGAA GCGCC TTTATAAGATAGTCG TERM 4266 3155667 - 3155654 - T 91 -9.5 -4.8143 | opp_overlap 3155654 TTAACAAGCGAAAAA GGCGC CGAA GCGCC TTTATAAGATAGTCG gcvP 3158566 - 3155693 - | glycine decarboxylase, PLP-dependent, subunit (protein P) of glycine cleavage complex gcvH 3159073 - 3158684 - | glycine cleavage complex lipoylprotein TERM 4267 3159120 - 3159100 - R 70 -8.9 -3.16667 | overlap 3159098 3159097 CAAAAAAGTAAATCA CGCGACGGC TTT GCCGTTACG CACAAAAACAGGTTT gcvT 3160191 - 3159097 - | aminomethyltransferase, tetrahydrofolate-dependent, subunit (T protein) of glycine cleavage complex TERM 4268 3159563 - 3159582 + g 71 -2.8 -4.8622 | gap 1 CCAGCTTCCACCAGC GCGCGCC AGAAATC GGC-CGC TTTTTCATTGGGCAG TERM 4269 3160595 - 3160572 - R 87 -10.3 -4.39386 | overlap 3160566 TTCAAATGAGGAAAA TCTCCCGGC GAAAAA ACCGGGAGA TGAAAGTGTGATGGG visC 3161841 - 3160639 - | putative oxidoreductase with FAD/NAD(P)-binding domain TERM 4270 3161241 - 3161253 + g 73 -9.1 -3.67775 | opp_overlap 3161229 AAACCTGCCGCGCCA CCGCA TCA TGCGG TTCTTCCGTGCGAAT ubiH 3163042 - 3161864 - | 2-octaprenyl-6-methoxyphenol hydroxylase, FAD/NAD(P)-binding pepP 3164364 - 3163039 - | proline aminopeptidase P II TERM 4271 3164297 - 3164283 - G 75 -5.6 -4.72272 | opp_overlap 3164283 3164287, overlap 3164284 3164286 3164287 CTGGTGCAGCAAAAA TCAGCG CGG CGCTGC CGGGTTGCATTTGCT TERM 4272 3164296 - 3164284 - G 71 -9.1 -3.43042 | opp_overlap 3164283 3164287, overlap 3164283 3164286 3164287 TGGTGCAGCAAAAAT CAGCG CGG CGCTG CCGGGTTGCATTTGC ygfB 3164968 - 3164390 - | hypothetical protein TERM 4273 3165362 - 3165343 - g 77 -3.4 -5.08601 | overlap 3165350 TTAGCGCAAGAAAAA GCGAAGAC TCGT GACTACGC GGCAAGTATGGAACA zapA 3165136 - 3165465 + | protein that localizes to the cytokinetic ring TERM 4274 3166256 - 3166245 - g 83 -5.8 -4.9218 | opp_overlap 3166246, overlap 3166246 CAGTTAGTAGAAAAA CTCC CAGT GGAG AAATGGGATATTCCA ygfA 3165765 - 3166313 + | putative ligase TERM 4275 3166491 - 3166510 + T 87 -11.4 -3.66178 | ACCCTTCTCCTTCAA GCCCTCGC TTCG GTGAGGGC TTTACCGTTACAGCC TERM 4276 3166655 - 3166685 + T 74 -8.2 -4.07568 | opp_overlap 3166659, overlap 3166659 TGGAGAAGGGATAAA AAAACGGGCAAGTC AGT GACCTGCCCGTTAA TTTTCAGAGAAGGGG TERM 4277 3166659 - 3166681 + T 100 -13.4 -3.66908 | opp_overlap 3166659, overlap 3166655 GAAGGGATAAAAAAA CGGGCAAGTC AGT GACCTGCCCG TTAATTTTCAGAGAA TERM 4278 3166681 - 3166659 - T 100 -15.6 -5.66684 | opp_overlap 3166659 3166655 GAAGGGATAAAAAAA CGGGCAAGTC AGT GACCTGCCCG TTAATTTTCAGAGAA serA 3167935 - 3166703 - | D-3-phosphoglycerate dehydrogenase TERM 4279 3167367 - 3167380 + g 72 -4.5 -4.70515 | overlap 3167366 3167368 TGTACCTGAGTGGCG TTGCC CAGC GGCAG TTTGTTTTCAATATC TERM 4280 3168020 - 3168002 - R 77 -3.2 -5.27399 | overlap 3168005 CAACATATCAAAAAA TAATATTG CGG CAATATGA ACGTTTGCGTCGCGA TERM 4281 3168017 - 3168005 - R 73 -4.9 -4.69962 | overlap 3168002 CATATCAAAAAATAA TATTG CGG CAATA TGAACGTTTGCGTCG TERM 4282 3168164 - 3168190 + r 78 -11.6 -2.91873 | opp_overlap 3168157, overlap 3168161 AATGAATAGAATTTT TTTAACGGGGGA GGT TCCCCCGTCAGA TCATTTCACAATAGT rpiA 3168850 - 3168191 - | ribose 5-phosphate isomerase, constitutive TERM 4283 3168277 - 3168299 + g 72 -7 -4.20531 | AACCAACAGTCACCA CGCCAGGAAT CGC ATTTATGGCG TTTTCCATCGCTATC yqfE 3169136 - 3168906 - | hypothetical protein argP 3169277 - 3170170 + | DNA-binding transcriptional activator, replication initiation inhibitor TERM 4284 3170208 - 3170180 - T 100 -14.8 -3.80114 | opp_overlap 3170183, overlap 3170183 GATTAATCCATCAAA TAACGCCTGATA GCACA TATCAGGCGTTA TCCTCACTTCTTTTT TERM 4285 3170205 - 3170183 - T 93 -12.1 -4.02571 | opp_overlap 3170183, overlap 3170180 TAATCCATCAAATAA CGCCTGATA GCACA TATCAGGCG TTATCCTCACTTCTT TERM 4286 3170183 - 3170205 + T 88 -12.1 -3.45434 | opp_overlap 3170183 3170180 TAATCCATCAAATAA CGCCTGATA GCACA TATCAGGCG TTATCCTCACTTCTT TERM 4287 3170807 - 3170828 + T 72 -5.9 -4.57353 | gap 1, overlap 3170806 GATGACCATGAATGG CG-CAGTGCT ACC AGTACTGGCG TTTTATATCGTCGCC TERM 4288 3171204 - 3171214 + T 70 -6.8 -4.06419 | opp_overlap 3171191 AACGCCGCCATGTTG CGTG CGG CACG TTATTTATGGAGCGA TERM 4289 3171429 - 3171485 + T 83 -12.6 -3.0682 | TCGATGCTGGGTTAA TGGTTTGTCCCGTCACGAT-CTTCAGCA ATA TGCTGAAGCATCGTGGCGGTATAA-CGA TGATTTCTGATTGAA ygfI 3172321 - 3171425 - | putative DNA-binding transcriptional regulator TERM 4290 3172446 - 3172476 + r 74 -10.5 -3.19602 | gap 1, opp_overlap 3172435 3172445 3172444 3172448, overlap 3172444 AATATCGGGTAAAGG CAT-TAGCCCGACG AATA CGTCGGGCTACAAG TATTAATGTGCAGCA TERM 4291 3172473 - 3172448 - R 84 -13.3 -2.64472 | opp_overlap 3172446 3172444, overlap 3172435 3172445 3172444 TATCGGGTAAAGGCA TTAGCCCGACG AATA CGTCGGGCTAC AAGTATTAATGTGCA yggE 3173219 - 3172479 - | hypothetical protein argO 3173944 - 3173312 - | arginine transporter TERM 4292 3174074 - 3174049 - R 85 -11.9 -3.33839 | opp_overlap 3174047, overlap 3174047 AAAACTAATAAGAGA GAGGCCAGAGA GTAT TATCTGGCCTC AGCGTTGATTACGCA mscS 3174943 - 3174083 - | mechanosensitive channel TERM 4293 3175109 - 3175093 - R 100 -11.5 -5.40072 | TTTTGGCGAAAAAAA GACCCGC AGA GCGGGCC TTGAGATAAGCAGAA fbaA 3176213 - 3175134 - | fructose-bisphosphate aldolase, class II TERM 4294 3176397 - 3176423 + r 95 -7.3 -5.37865 | gap 1, opp_overlap 3176401, overlap 3176398 3176401 TAAAAGCGCGCTGAA ACA-AGGGCAGG TTTC CCTGCCCTGTGA TTTTTTACTTCTTAG TERM 4295 3176398 - 3176422 + r 85 -10.8 -3.81092 | gap 1, opp_overlap 3176401, overlap 3176397 3176401 AAAAGCGCGCTGAAA CA-AGGGCAGG TTTC CCTGCCCTGTG ATTTTTTACTTCTTA TERM 4296 3176401 - 3176418 + r 90 -12.7 -3.27687 | opp_overlap 3176401, overlap 3176398 3176397 AGCGCGCTGAAACAA GGGCAGG TTTC CCTGCCC TGTGATTTTTTACTT TERM 4297 3176418 - 3176401 - R 100 -12.7 -3.90922 | opp_overlap 3176401 3176398 3176397 AGCGCGCTGAAACAA GGGCAGG TTTC CCTGCCC TGTGATTTTTTACTT pgk 3177591 - 3176428 - | phosphoglycerate kinase epd 3178660 - 3177641 - | D-erythrose 4-phosphate dehydrogenase TERM 4298 3178738 - 3178752 + H 72 -10 -2.87756 | opp_overlap 3178730 3178731, overlap 3178735 GGGGAAACCTTACCT GTCGCA AAC TGCGAC TGATTGGTTAATTGT ECS88_3204 3179032 - 3179463 + | conserved hypothetical protein with PD1-like DNA-binding motif TERM 4299 3179717 - 3179766 + G 71 -9.3 -3.51411 | gap 2 GCCGCCGCATTTGCG CCCG-TCGCGATGGTCA-TCGGC CTGGTC GCCGGTTGGCTGGCGCGAGCGGG TTGGTTTCGCACCCT ECS88_3205 3179486 - 3180064 + | putative ABC-type transport system ECS88_3206 3180065 - 3180772 + | putative ABC-type transport system TERM 4300 3180846 - 3180858 + GF 71 -7.7 -3.72576 | overlap 3180843 CTATGTCAAACCGGG GATGG TCG CCATC TTTGGTGACAACGGC TERM 4301 3181200 - 3181186 - gf 73 -10 -3.03124 | CGTCACCCGGCAACA CTCTCC GGT GGAGAG ACACAGCGTGTGGTC ECS88_3207 3180754 - 3181437 + | putative ATP-binding protein of ABC transport system TERM 4302 3181659 - 3181646 - gT 78 -5.2 -4.7657 | opp_overlap 3181657, overlap 3181648 GAAAAACCTGAAAAA CCGC CAGCGC GCGG CAAAGATTGGCGTAC TERM 4303 3181990 - 3181973 - gT 70 -6.9 -4.08064 | overlap 3181960 AAGCTGGCTGGAAAA GTGCCGC CAGC GAGGCAC GAGCGTCGTAGCAAT TERM 4304 3182012 - 3182035 + GT 81 -9.6 -4.11805 | opp_overlap 3182008 CGTAGCAATCAGTCA TGACGCCG CATTTACC CGGCGTCA TTTCTCTCGTGTGGT ECS88_3208 3181398 - 3182108 + | putative ATP-binding protein of ABC transport system yggC 3182793 - 3182080 - | conserved hypothetical protein; putative nucleoside triphosphate hydrolase domain TERM 4305 3182269 - 3182243 - G 77 -12.2 -2.78384 | opp_overlap 3182244 TTGCGCCCCACCAGA CGCTCCCGCAAC GCA GATGCGGGAGCT TTGATAAAGATCGAG TERM 4306 3182244 - 3182268 + g 100 -15.7 -3.73775 | opp_overlap 3182243 TGCGCCCCACCAGAC GCTCCCGCAAC GCA GATGCGGGAGC TTTGATAAAGATCGA yggD 3183299 - 3182790 - | putative DNA-binding transcriptional regulator TERM 4307 3183578 - 3183597 + r 87 -13.6 -3.05384 | overlap 3183580 CAGCCGGTTTGCGGC CAGGCAGC CAAC GCTGCCTG TTCCGTAACGCGAAA TERM 4308 3183580 - 3183595 + r 73 -10.4 -3.08679 | overlap 3183578 GCCGGTTTGCGGCCA GGCAGC CAAC GCTGCC TGTTCCGTAACGCGA yggP 3184910 - 3183633 - | putative dehydrogenase cmtA 3186313 - 3184925 - | fused mannitol-specific PTS enzymes: IIB component ; IIC component cmtB 3186784 - 3186341 - | putative mannitol-specific enzyme IIA component of PTS ECS88_3216 3187161 - 3188069 + | putative membrane protease TERM 4309 3188092 - 3188075 - T 100 -14.1 -5.65513 | TACTAAGTAAAAAAA GGGCCGC TTTC GCGGCCC TTGAGATTGATAGCA TERM 4310 3188272 - 3188243 - T 89 -12.1 -3.62046 | opp_overlap 3188249 GCACTTTGCCAACAA TCTGAAGGGCCGC ATTT GCGGCCCTTCTCA CAAAGCATCTTACCG TERM 4311 3188249 - 3188266 + T 100 -14.1 -3.28924 | opp_overlap 3188243 TGCCAACAATCTGAA GGGCCGC ATTT GCGGCCC TTCTCACAAAGCATC tktA 3190280 - 3188289 - | transketolase 1, thiamin-binding TERM 4312 3189975 - 3189991 + g 83 -10.1 -4.13945 | opp_overlap 3189974, overlap 3189976 TGCGGTGTAACCCAC TTCCGGG TGA CCCGGAG TTTTCGAGTGCAGCT TERM 4313 3189976 - 3189990 + g 75 -11.4 -3.08046 | opp_overlap 3189974, overlap 3189975 GCGGTGTAACCCACT TCCGGG TGA CCCGGA GTTTTCGAGTGCAGC TERM 4314 3190710 - 3190699 - g 81 -4.4 -5.0538 | GCGCAGGTGAAAAAA CTGA GCGA TCAG GCATGCCAGGAGATG yggG 3190558 - 3191316 + | putative peptidase speB 3192440 - 3191520 - | agmatinase TERM 4315 3192073 - 3192063 - G 72 -6.8 -4.1822 | CGGCAGCGTAACAAA GTGG TCA CCAC CGAAGGAGAGCATAC TERM 4316 3192400 - 3192388 - G 77 -3.4 -5.03314 | opp_overlap 3192397 GGCAGGCGTAAAAAA CCAA AGGCG TTGG AAACCAGTGAGTTAT TERM 4317 3192476 - 3192508 + r 100 -14.9 -3.32997 | opp_overlap 3192476, overlap 3192471 GTCGATATAAAAAAA CCCTTCCGCGTCG TTAGGCC CGACGAGGAAGGG TTGGATTTGTGAAAC TERM 4318 3192508 - 3192476 - R 100 -14.9 -5.71712 | opp_overlap 3192471 3192476 GTCGATATAAAAAAA CCCTTCCGCGTCG TTAGGCC CGACGAGGAAGGG TTGGATTTGTGAAAC ECS88_3220 3193307 - 3192576 - | conserved hypothetical protein; putative exported protein TERM 4319 3193439 - 3193400 - R 100 -13.6 -5.1383 | overlap 3193404 3193428 AAGAATATATAAAAA GAAAGCGGGGCGATTTAC TTAA ATAAATCGCCCCGCCAGC GGAATAATCTTAATT TERM 4320 3193435 - 3193404 - R 100 -19.6 -5.02777 | overlap 3193400 3193428 ATATATAAAAAGAAA GCGGGGCGATTTAC TTAA ATAAATCGCCCCGC CAGCGGAATAATCTT speA 3195429 - 3193453 - | biosynthetic arginine decarboxylase, PLP-binding TERM 4321 3193758 - 3193748 - G 81 -6.8 -4.59342 | overlap 3193750 CCGACCATAAAGAAA CCGA GCA TCGG CGGATTCTCCGGATC yqgB 3195584 - 3195438 - | hypothetical protein TERM 4322 3195646 - 3195629 - H 87 -8.5 -4.52703 | opp_overlap 3195619 3195641, overlap 3195619 GAAACCACGAGAAAA CTCTTGT TTTT ACAAGAG CGCCCTTGTTCAGTC TERM 4323 3195885 - 3195909 + G 79 -2.2 -5.27335 | gap 1, overlap 3195889 ACCCGGCTGGAAGTG GCAACACGA AAGAAACG TCGTGT-GC TTTTTATTTAAGCCG yqgC 3195705 - 3195920 + | hypothetical protein TERM 4324 3195923 - 3195933 + F 79 -8.2 -4.36914 | GCTTTTTATTTAAGC CGCG CGC CGCG TTTTATACCCCACAA TERM 4325 3196700 - 3196688 - g 91 -9.1 -4.59853 | TGAAGTGCGTAAAAA CGGCA CTC TGCCG TGGCTGCGCCCGGAC TERM 4326 3197299 - 3197287 - g 72 -5.5 -4.57482 | opp_overlap 3197287 CGATCTACAAAGAAA CCGCA GCA TACGG TCACTTTGGTCGTGA metK 3196224 - 3197378 + | methionine adenosyltransferase 1 TERM 4327 3197401 - 3197419 + F 100 -11.7 -5.48213 | opp_overlap 3197401 TCACCTGCTTTCAAA GGCCAGC CTCGC GCTGGCC TTTTTCTTTTACCTC TERM 4328 3197419 - 3197401 - f 88 -11.7 -3.53444 | opp_overlap 3197401 TCACCTGCTTTCAAA GGCCAGC CTCGC GCTGGCC TTTTTCTTTTACCTC TERM 4329 3197734 - 3197753 + F 78 -6.5 -4.68994 | opp_overlap 3197714, overlap 3197714 GTAAGCGATTACACT GATGTGA TTTGCT TCACATC TTTTTACGTCGTACT galP 3197815 - 3199209 + | D-galactose transporter TERM 4330 3199362 - 3199349 - g 70 -4.5 -4.56597 | overlap 3199350 3199351 CGCCTGCGGGAAAAA CTCGC CCAG GCGAA CCTGAAGCTAGGGCG sprT 3199286 - 3199783 + | hypothetical protein endA 3199878 - 3200585 + | DNA-specific endonuclease I TERM 4331 3200633 - 3200655 + F 71 -4.7 -4.71061 | opp_overlap 3200634, overlap 3200634 TACCCCACGCGTACA ACCGCGTGG GGAGA CGACGCGGA TTTTTAACTATGCGT TERM 4332 3201363 - 3201377 + G 76 -7.8 -4.17089 | GCTCACCGCCATTAC CGCGCT ACA AGTGCG TTTTGGCGATTTGGG yggJ 3200665 - 3201396 + | hypothetical protein TERM 4333 3202298 - 3202318 + G 74 -11.2 -3.1552 | opp_overlap 3202296, overlap 3202296 AGATTGAAGCAGAGT TTCCGGTG TCGAT CACCGGAA TGTTAATGGATGCCA gshB 3201409 - 3202359 + | glutathione synthetase yqgE 3202468 - 3203031 + | hypothetical protein TERM 4334 3203402 - 3203385 - g 76 -7.7 -4.15044 | opp_overlap 3203398 CGGGCGCTCAACAAA GGCAAAG TCGA CTCTGCC TCTGCGGTTATTATT yqgF 3203031 - 3203447 + | Holliday junction resolvase yggR 3204601 - 3203621 - | transporter TERM 4335 3204668 - 3204689 + G 83 -12.3 -3.28791 | GGGACAAAATCTCAG CGGCTGCAA CGCG TTGCGGCCG TTCTCCAGAAGAAAT TERM 4336 3204752 - 3204733 - g 83 -5.7 -5.13722 | overlap 3204734 GTCAGTAAAACAAAA CCTGCGA GCGCCA TCGCAGA AGCCATTGATGCCGG TERM 4337 3204899 - 3204887 - g 72 -4.7 -4.65916 | opp_overlap 3204890, overlap 3204854 3204888 TGCAGTCTAATAAAA GCCGC CTG GTGGC AGAGCATTTCGACTG yggS 3204619 - 3205323 + | putative enzyme yggT 3205341 - 3205907 + | conserved hypothetical protein; putative inner membrane protein TERM 4338 3206129 - 3206114 - g 70 -3.9 -4.65895 | GTGGTGATTGAAAAA GGCGA ACTTGG CCGCC ACAAACAAATTAAAA yggU 3205904 - 3206194 + | hypothetical protein TERM 4339 3206438 - 3206461 + G 77 -10.2 -3.65046 | overlap 3206430 AGATGCGCTGGGTGG CGCGCCGGGT ATTT ACTCCGCGCG TTATTCCGGTGAAGA yggV 3206202 - 3206795 + | dITP/XTP pyrophosphatase TERM 4340 3207650 - 3207638 - g 72 -6.2 -4.30576 | opp_overlap 3207636 3207638 TGCGTACCACCAAAA CGCG TCATC CGCG TGGTTTTATGCAGGG yggW 3206788 - 3207924 + | putative oxidoreductase TERM 4341 3207976 - 3207926 - T 79 -9.8 -3.72576 | gap 1, overlap 3207927 TTCTGGCGGAGTAAA TTTG-TATTGCCGGATGCGGCGT GCGTGT ACGCAGCATCCGGCAACAACTCA TGCGTCATCGCAAAA TERM 4342 3207972 - 3207927 - T 79 -12.1 -2.83403 | gap 2, overlap 3207926 TCTGGCGGAGTAAAT TTGTATTGCCGGATGCGGCGT GCGTGT ACGCAGCATCCGGCAA--CAA CTCATGCGTCATCGC yggM 3209000 - 3207993 - | hypothetical protein TERM 4343 3208878 - 3208890 + g 71 -3.3 -4.76892 | opp_overlap 3208878 ATCAAGCTTGAGAAT GCCGT GAT ACTGC TTTTTGAATTGATCT TERM 4344 3209109 - 3209089 - R 100 -14.7 -3.73068 | opp_overlap 3209085 GTCTGAAGTGAATAA GCCCCGGCA CGA TACCGGGGC GAAGTGATTAGTACT ansB 3210163 - 3209117 - | periplasmic L-asparaginase II TERM 4345 3209466 - 3209452 - G 83 -10 -4.09117 | opp_overlap 3209432 3209452 3209451 CGTAGTTATAAACAA TGCCGA CTT TCGGCA GTTCATTCAGCTTAG TERM 4346 3210323 - 3210301 - R 80 -9.2 -4.12315 | opp_overlap 3210301 AAACGAAGAATTAAA CGGCATAAAA AAG TATTATGCCG TCTTAAAATAGAGGA yggN 3211058 - 3210339 - | conserved hypothetical protein; periplasmic protein TERM 4347 3210416 - 3210435 + g 77 -6.4 -4.63184 | opp_overlap 3210415 CATCTTTGCCAAACT GCTGGAAA TCTT TTTCCTGC TTTTTCCACTCGGTT TERM 4348 3210987 - 3210965 - G 73 -12 -2.82623 | overlap 3210962 3210967 GCGGGCTGACAATCA CATCGTCACG CGG CGTGACGCTG CACTGGTAGTCGGCG TERM 4349 3211029 - 3211045 + g 74 -8 -4.12188 | opp_overlap 3211029 3211028 TGCCGTCACTGAAAG TGCTGC CGCCA GCAGCA TTTTGCGCATCATAG TERM 4350 3211102 - 3211079 - R 87 -8.8 -4.44667 | overlap 3211082 TCCCTCAAGAACAAA TCAGGCCAGC ATTT GCTGGCCCCA GATTGATAACAAAGT TERM 4351 3211099 - 3211082 - R 86 -12.7 -3.19055 | overlap 3211079 CTCAAGAACAAATCA GGCCAGC ATTT GCTGGCC CCAGATTGATAACAA yggL 3211568 - 3211242 - | hypothetical protein yggH 3212287 - 3211568 - | tRNA (m7G46) methyltransferase, SAM-dependent TERM 4352 3213276 - 3213253 - g 70 -6 -4.24342 | gap 1, opp_overlap 3213266 3213267, overlap 3213254 TTGCCGATGAAGAAA GTTTGCGGCAG TGG CTGGCGCA-AC GACAGATTTCTGCCG mutY 3212448 - 3213500 + | adenine DNA glycosylase TERM 4353 3213710 - 3213690 - g 73 -4 -4.78981 | overlap 3213704 ATTAATGAAAAGAAA CTCAACAT GATGA ATGCCGAG CACCGCAAGCTGCTG yggX 3213528 - 3213803 + | protein that protects iron-sulfur proteins against oxidative damage TERM 4354 3213834 - 3213807 - f 100 -6.3 -5.8096 | gap 1, opp_overlap 3213809, overlap 3213809 3213810 GATAAAAAATAAAAA CAGT-GCCGGAG CACGC CTCCGGCAACTT GCATAAAAACAAACA TERM 4355 3213831 - 3213809 - f 88 -9.1 -4.48934 | opp_overlap 3213809, overlap 3213807 3213810 TAAAAAATAAAAACA GTGCCGGAG CACGC CTCCGGCAA CTTGCATAAAAACAA TERM 4356 3213830 - 3213810 - f 86 -12.6 -3.257 | opp_overlap 3213809, overlap 3213809 3213807 AAAAAATAAAAACAG TGCCGGAG CACGC CTCCGGCA ACTTGCATAAAAACA mltC 3213868 - 3214947 + | membrane-bound lytic murein transglycosylase C TERM 4357 3214982 - 3214957 - f 70 -9 -3.19653 | overlap 3214958 CGATAATTCCACTAA CCGCCCCTGA CGATGC TCAGGGGCAA AAATGTTATCCACAT TERM 4358 3214981 - 3214958 - f 70 -10.3 -2.51471 | overlap 3214957 GATAATTCCACTAAC CGCCCCTGA CGATGC TCAGGGGCA AAAATGTTATCCACA nupG 3215149 - 3216405 + | nucleoside transporter TERM 4359 3216410 - 3216453 + T 100 -14 -3.34013 | opp_overlap 3216421, overlap 3216421 TTAGCCACTAATTAC GCAAAGAAAAACGGGTCGCC AGAA GGTGACCCGTTTTTTTATTC TTACTTCAACACATA TERM 4360 3216442 - 3216421 - T 100 -11.5 -5.30616 | opp_overlap 3216421 3216410 TTACGCAAAGAAAAA CGGGTCGCC AGAA GGTGACCCG TTTTTTTATTCTTAC TERM 4361 3216421 - 3216442 + T 100 -13.7 -5.95946 | opp_overlap 3216421, overlap 3216410 TTACGCAAAGAAAAA CGGGTCGCC AGAA GGTGACCCG TTTTTTTATTCTTAC speC 3218589 - 3216454 - | ornithine decarboxylase, constitutive TERM 4362 3216763 - 3216774 + g 76 -3.6 -4.92363 | CGGGAAACTCTGCTG GCGG AACA TCGC TTTTTGTAGGTCTTT TERM 4363 3217495 - 3217506 + g 82 -3 -5.29782 | ACGCGCCTGTCCACG GATA TGGT TATC TTTTTTATGGATCTG TERM 4364 3218182 - 3218197 + g 77 -6.8 -4.56597 | opp_overlap 3218182 GAAATCGTAAAAATG GCGTCC GGCA GGATGC TTTTTAAAGAACGCA TERM 4365 3218431 - 3218410 - G 90 -7.3 -5.0916 | overlap 3218427 TTCGGAATACAAAAA CACCGGT AGATGAAA ACCGGTG CGCTTAAGCAACGCA TERM 4366 3218610 - 3218600 - H 76 -8.2 -4.21936 | TTCATAAGCGCAAAA CCCG TTT CGGG GAAGTAAGAATACCG TERM 4367 3218694 - 3218724 + H 74 -9.9 -3.41602 | opp_overlap 3218693 3218696 3218703 CCGACCGCCAGACAT CAGTAAAAGCAGA AACGC TCTGATTTTACTG TTGTCCTGCAGTGAG yqgA 3218988 - 3219695 + | conserved hypothetical protein; putative inner membrane protein TERM 4368 3219843 - 3219827 - f 74 -10.9 -2.62616 | opp_overlap 3219826 3219825 3219822 TCAGTCGGTAGAGCA GGGGATT GAA AATCCCC GTGTCCTTGGTTCGA TERM 4369 3219889 - 3219908 + F 100 -13.6 -4.98531 | opp_overlap 3219889 CCAAATTCATATCAA CGGACCTC CACG GAGGTCCG TTTTTCGTTTCAGAA TERM 4370 3219908 - 3219889 - f 100 -13.6 -3.31196 | opp_overlap 3219889 CCAAATTCATATCAA CGGACCTC CACG GAGGTCCG TTTTTCGTTTCAGAA TERM 4371 3220288 - 3220275 - g 70 -5.2 -4.386 | GAAGCTCGTACAAAA CGGG ATGAGG CCCG AAAACTGATTTCAGA int 3220074 - 3221336 + | Prophage integrase TERM 4372 3221330 - 3221378 + F 91 -6.9 -5.38958 | gap 2, opp_overlap 3221334 3221336 3221340, overlap 3221333 3221340 GATTAACAATCCATT AAAATAG-T-AAGCAGTCCGGGC AATCA GCCCGGACTGCTTTAACTGATTA TTTTTCTTTGTAAAT TERM 4373 3221333 - 3221375 + F 89 -8.6 -4.76311 | gap 2, opp_overlap 3221334 3221336 3221340, overlap 3221330 3221340 TAACAATCCATTAAA ATAG-T-AAGCAGTCCGGGC AATCA GCCCGGACTGCTTTAACTGA TTATTTTTCTTTGTA TERM 4374 3221370 - 3221334 - f 90 -11.1 -4.32651 | gap 2, opp_overlap 3221333 3221330 3221340, overlap 3221336 3221340 AACAATCCATTAAAA TAGTAAGCAGTCCGGGC AATCA GCCCGGACTGCTT--TA ACTGATTATTTTTCT TERM 4375 3221370 - 3221336 - f 100 -14.3 -3.75571 | opp_overlap 3221333 3221330 3221340, overlap 3221334 3221340 CAATCCATTAAAATA GTAAGCAGTCCGGGC AATCA GCCCGGACTGCTTTA ACTGATTATTTTTCT TERM 4376 3221340 - 3221366 + F 100 -19.5 -3.74658 | opp_overlap 3221334 3221336 3221340, overlap 3221333 3221330 CCATTAAAATAGTAA GCAGTCCGGGC AATCA GCCCGGACTGC TTTAACTGATTATTT TERM 4377 3221366 - 3221340 - f 100 -19.5 -3.55966 | opp_overlap 3221340 3221333 3221330, overlap 3221334 3221336 CCATTAAAATAGTAA GCAGTCCGGGC AATCA GCCCGGACTGC TTTAACTGATTATTT TERM 4378 3221988 - 3221962 - g 78 -5.1 -4.87665 | opp_overlap 3221964 TTTGAGGGAGAAAAA GACGATGTCGA AACGG TCGATGTCGTC TTGCGCCCAAAAGTT TERM 4379 3223244 - 3223225 - g 85 -2.9 -5.34365 | gap 1, overlap 3223226 3223227 3223229 GGACAAGAACAAAAA GTCACTCT ACTGA AGAGTG-C TAAAACGGAATGGAA ECS88_3251 3221776 - 3225303 + | Putative superfamily I DNA helicase TERM 4380 3226260 - 3226238 - f 74 -5.5 -4.67607 | gap 1 CCGTCAATAAATAAA CCGGGAGCTG TATT CAGC-CACGG CGTGGTTGGCACGGG ECS88_3253 3226497 - 3228038 + | Putative transposase for ISEc12, catalytic region (orf1) ECS88_3254 3228050 - 3228799 + | putative transposase iISEc12, ATP-binding protein (orf2) TERM 4381 3228839 - 3228814 - T 76 -5.5 -4.75776 | gap 1, overlap 3228837 3228838 AAGGTAATTTAAAAA CGGTTC-TGTGA AAG TGACACGAACCG ATCTCCATCGATGTT TERM 4382 3229474 - 3229455 - T 87 -6.4 -5.18715 | ATAAAAACAATAAAA TCCGGG GTGTATTG CCCGGA CAAAACAGTTTTCTG TERM 4383 3229595 - 3229568 - T 79 -7.8 -4.41348 | gap 1, opp_overlap 3229569 3229571, overlap 3229571 CTCCTGTGAAACAAA TAACCCTGCGGTA TAT TACTGCAGGG-TA TTTCTGTTTAGTTGC TERM 4384 3229569 - 3229595 + T 93 -11.6 -4.40184 | opp_overlap 3229568 3229571, overlap 3229571 TCCTGTGAAACAAAT AACCCTGCGGTA TAT TACTGCAGGGTA TTTCTGTTTAGTTGC TERM 4385 3229593 - 3229571 - T 95 -12 -4.32678 | opp_overlap 3229571 3229569, overlap 3229568 CTGTGAAACAAATAA CCCTGCGGTA TAT TACTGCAGGG TATTTCTGTTTAGTT TERM 4386 3229571 - 3229593 + T 100 -14.2 -3.79096 | opp_overlap 3229568 3229571, overlap 3229569 CTGTGAAACAAATAA CCCTGCGGTA TAT TACTGCAGGG TATTTCTGTTTAGTT tia 3230427 - 3229672 - | Tia invasion determinant TERM 4387 3229718 - 3229728 + g 70 -5.4 -4.40003 | TCGTGACTTTTAACG TCAG CCT CTGA TTTATATTTATCCCC TERM 4388 3230524 - 3230506 - R 84 -7.4 -4.98672 | overlap 3230507 3230516 3230520 GGTAAAAAGAGAAAA TTCGATCG AAT CGATCGAC AAAATCGATCATGCA TERM 4389 3230523 - 3230507 - R 83 -10.9 -3.57576 | overlap 3230506 3230516 3230520 GTAAAAAGAGAAAAT TCGATCG AAT CGATCGA CAAAATCGATCATGC papG 3231788 - 3230778 - | Fimbrial PapG protein (P pilus class II adhesin) (PapGII) TERM 4390 3231177 - 3231190 + g 70 -6.7 -4.10007 | GAATAACATTTCATT CTCTC TTGG GAGAG TTTTGGCCACATTGT papF 3232362 - 3231832 - | Fimbrial adapter PapF precursor papE 3232946 - 3232407 - | Fimbrial tip protein PapE papK 3233494 - 3232955 - | Fimbrial adapter PapK precursor TERM 4391 3233329 - 3233343 + g 70 -7 -4.07687 | opp_overlap 3233328 3233329 GCGGATACCAGAAAT CCCTGG ACG CCCGGG TTTTGAAGACGACAT papJ 3234082 - 3233501 - | Protein PapJ precursor, P pilus assembly TERM 4392 3233670 - 3233636 - G 75 -5 -4.8048 | overlap 3233640 CCGGCACAGTAAAAA GGTATCACCATCGTGT ATA ACAAGATGGTCACAGC CGGATAGCTTACGGT papD 3234853 - 3234119 - | Chaperone protein PapD precursor TERM 4393 3234533 - 3234521 - G 77 -3.3 -5.16132 | GAGATTAAAATAAAA CAGTG ATT CCCTG TCCTGAGGAAGTTTA papC 3237455 - 3234924 - | Outer membrane usher protein PapC precursor TERM 4394 3237410 - 3237379 - G 71 -9.6 -3.48115 | opp_overlap 3237384, overlap 3237377 3237375 3237381 GCGTTACAAAACAGA GACAACAATATCAC ACAG GTAATATTGTTGAC TGCAAAAGGTATTCT TERM 4395 3237408 - 3237381 - G 76 -10.8 -3.30825 | opp_overlap 3237384, overlap 3237379 3237377 3237375 GTTACAAAACAGAGA CAACAATATCAC ACAG GTAATATTGTTG ACTGCAAAAGGTATT papH 3238080 - 3237493 - | minor pilin protein PapH papA 3238724 - 3238143 - | major pilin protein PapA papB 3239212 - 3238898 - | pap operon regulatory protein PapB TERM 4396 3239524 - 3239507 - H 79 -2.7 -5.41941 | TAAAGCAAATAAAAA GCAAATT CACT AAATTGC ACAAATAAAGCAAAC TERM 4397 3239606 - 3239581 - H 76 -2.7 -5.27206 | gap 1, opp_overlap 3239583, overlap 3239583 3239584 CACAGAGAATAAAAA TACCTTTCCGTT GAT AACAGAAAG-CA TGATTTTTATTATTC TERM 4398 3239604 - 3239584 - H 70 -9.1 -3.13245 | opp_overlap 3239583, overlap 3239583 3239581 AGAGAATAAAAATAC CTTTCCGTT GAT AACAGAAAG CATGATTTTTATTAT papI 3239644 - 3239877 + | pap operon regulatory protein PapI TERM 4399 3240032 - 3240015 - T 72 -3.3 -4.99638 | overlap 3240017 AGACTTACAGAAAAA CACTCCG GCAC CGGTGTA ATGCCAGTTATAATC ECS88_3268 3240335 - 3240072 - | hypothetical protein ECS88_3269 3240456 - 3240220 - | conserved hypothetical protein; putative phage regulatory protein ECS88_3270 3241130 - 3240525 - | hypothetical protein ECS88_3271 3241924 - 3241358 - | hypothetical protein ECS88_3272 3242019 - 3242174 + | hypothetical protein pgtP 3245285 - 3243921 - | Phosphoglycerate transporter protein TERM 4400 3244781 - 3244759 - G 70 -6.2 -4.15565 | CCGAGTAGGGCAAAA GCGGCACCAA CAA TCGGTGCAAC AATACCACCACCGAT TERM 4401 3245394 - 3245377 - H 95 -8.5 -5.22943 | ATCAAACTGAAAAAA TGTGTCA CAAT TGACACA AAATAATAAAATCAA TERM 4402 3246319 - 3246297 - g 93 -4.1 -5.54907 | gap 2, opp_overlap 3246298, overlap 3246298 3246299 CCGATAAAATAAAAA GCGGACTCGGC GTT GCCG-GCCC-C GTTATCGATAACTAT pgtC 3245594 - 3246901 + | Phosphoglycerate transport regulatory protein TERM 4403 3246929 - 3246906 - g 79 -4.6 -4.99134 | gap 1, opp_overlap 3246911, overlap 3246911 AGCTGAAATGAAAAA CATAA-CGCTG TGG CAGCGTTTAAG ACAGGTCAGTATCAG TERM 4404 3246911 - 3246923 + G 71 -9.1 -3.53811 | opp_overlap 3246911 3246906 AAATGAAAAACATAA CGCTG TGG CAGCG TTTAAGACAGGTCAG TERM 4405 3246923 - 3246911 - g 81 -9.1 -4.14792 | opp_overlap 3246911, overlap 3246906 AAATGAAAAACATAA CGCTG TGG CAGCG TTTAAGACAGGTCAG TERM 4406 3248695 - 3248732 + G 71 -9.1 -3.53444 | opp_overlap 3248703 3248704, overlap 3248714 3248717 CTGAACGTATTCATT GGCGATAATGGCCCGGG CTGG CCTGAGGCATTGTTGCC TTCGTTATTGAAGCC pgtB 3246898 - 3248907 + | Phosphoglycerate transport system sensor protein TERM 4407 3249228 - 3249215 - g 72 -5.2 -4.57073 | GATTTTTTGCAAAAA CCGG TCGATC CCGG CAAATTGCTTTCTCT pgtA 3248888 - 3250144 + | Phosphoglycerate transport system transcriptional regulatory protein TERM 4408 3250236 - 3250263 + F 76 -10.6 -3.01912 | opp_overlap 3250239 3250242, overlap 3250239 3250243 AGACCTGTCTCTTAT ACACAAGTCCCC ACCC GGGGATTTGTGA TGTCTGTCAGTCTGC TERM 4409 3250239 - 3250260 + F 74 -10.9 -2.73275 | opp_overlap 3250239 3250242, overlap 3250236 3250243 CCTGTCTCTTATACA CAAGTCCCC ACCC GGGGATTTG TGATGTCTGTCAGTC TERM 4410 3250243 - 3250256 + F 74 -8.1 -4.05389 | opp_overlap 3250242 3250239, overlap 3250239 3250236 TCTCTTATACACAAG TCCCC ACCC GGGGA TTTGTGATGTCTGTC ECS88_3281 3250353 - 3250628 + | hypothetical protein TERM 4411 3250705 - 3250728 + GT 74 -3.2 -4.88485 | overlap 3250707 CTGGATATATAGTCA GTGTATAAAT GCTT GTTTATACCC TTATTTTTTTACTTA ECS88_3283 3251060 - 3250737 - | hypothetical protein ECS88_3282 3250685 - 3250834 + | hypothetical protein TERM 4412 3250968 - 3250985 + gT 95 -7.1 -5.40072 | CCGAATGATTAACTT GATATTG TGAG CAATATC TTTTTTTGGCACAGA ECS88_3284 3251769 - 3251125 - | hypothetical protein ECS88_3285 3252098 - 3251790 - | conserved hypothetical protein; putative transcriptional regulator TERM 4413 3252028 - 3252002 - G 79 -2.3 -5.18726 | gap 2, overlap 3252006 TTCCCATAACAAAAA GCCAGCGGGCAGA AGC TCTGC--GCCAGC AACCCGCCGCCTCCA TERM 4414 3252538 - 3252549 + r 70 -5.8 -4.30719 | ATCTTTCTCCAGTGA CTGC TTCA GCAG TTTCTTCTCACCCGG TERM 4415 3252687 - 3252702 + r 72 -3.2 -4.94902 | TGCGCAGATGATTCA GAGCCT GTAT AGTCTC TTTTTCTGATCGTTC ibrA 3254000 - 3252768 - | immunoglobulin-binding regulator ECS88_3289 3254789 - 3254136 - | hypothetical protein ECS88_3290 3256434 - 3254974 - | putative overcoming lysogenization defect protein (old-like) TERM 4416 3255120 - 3255130 + g 84 -4 -5.24291 | opp_overlap 3255120 ACAAATTAATTATAA GATT TTG AATC TTTTCTTTTAATTTT TERM 4417 3256061 - 3256047 - G 74 -2.8 -5.02074 | GCATTGCCCAAAAAA GAGC TCGTCTT GCTC CTGTCCCCTGTTGCC ECS88_3291 3257480 - 3256593 - | transposase ORF B, IS629 ECS88_3292 3257806 - 3257480 - | transposase ORF A, IS629 TERM 4418 3259159 - 3259188 + r 74 -7.9 -4.11404 | gap 1, overlap 3259163 ACTGATTACTACACT GGT-ACCTGAGGCT CAC GGCCTCAGGTTGTC TTTATATACTCTCAG TERM 4419 3259163 - 3259183 + r 100 -13.3 -3.94344 | overlap 3259159 ATTACTACACTGGTA CCTGAGGCT CAC GGCCTCAGG TTGTCTTTATATACT ireA 3261248 - 3259200 - | iron-regulated outer membrane virulence protein TERM 4420 3261597 - 3261584 - R 81 -2.3 -5.54907 | opp_overlap 3261588 3261591, overlap 3261585 GGTAGAAAATAAAAA TGGGC GACT GACCA GATATGGGAGTCTCC ECS88_3296 3261942 - 3261724 - | hypothetical protein TERM 4421 3261977 - 3261994 + r 70 -9.1 -3.27022 | opp_overlap 3261977 3261969 3261970 CAGAAAACGAGCTAA GGGCGTT GGCT GACGCCC TTACTGTGGCATAAG ECS88_3297 3262770 - 3262030 - | hypothetical protein TERM 4422 3262347 - 3262325 - G 70 -4.1 -4.59773 | gap 1, overlap 3262327 3262329 GTCCACCTGGAAAAA TGGACCAGGC CATC GCCTTG-CCA GGGCTCAAGATGCAG ECS88_3298 3262875 - 3263123 + | hypothetical protein ECS88_3299 3263365 - 3263129 - | hypothetical protein TERM 4423 3263244 - 3263232 - G 74 -3.4 -4.97666 | AACACACCATAAAAA CGAT TAACC ATCG ATAACGTAAATCTCA ECS88_3300 3263635 - 3263778 + | hypothetical protein TERM 4424 3263910 - 3263893 - T 76 -6.3 -4.56597 | TTTCTGTCCTAAAAA CAGAGCA GATT TACTCTG GAATTATTTTTCTGC ECS88_3301 3264076 - 3263903 - | hypothetical protein TERM 4425 3265191 - 3265165 - g 100 -10.8 -4.59773 | CGCCATCCGCAAAAA GCGCTCTGGACA GAC TGACCAGAGAGC GGAAAACAACACAGC ECS88_3302 3264375 - 3265250 + | hypothetical protein TERM 4426 3265263 - 3265275 + T 91 -7.7 -5.18715 | TAACTTTCACCACTT TCGCT CCT AGCGA TTTTCTTCTTTTTGT ECS88_3303 3266200 - 3265247 - | hypothetical protein TERM 4427 3266258 - 3266276 + H 71 -9.6 -3.06796 | opp_overlap 3266258 3266254 TACCTGAATGATAAA CCGGATTA GTG TGATCCGG TTCAGTGAAATCAAC TERM 4428 3266276 - 3266258 - H 72 -7.4 -4.0616 | opp_overlap 3266258, overlap 3266254 TACCTGAATGATAAA CCGGATTA GTG TGATCCGG TTCAGTGAAATCAAC TERM 4429 3266737 - 3266751 + G 71 -2.1 -4.91194 | gap 1, opp_overlap 3266736, overlap 3266732 TTTACTGAATGAAGG CGCAGA TCCC TC-GCG TTTTCTGTTTGTTCT ECS88_3304 3266303 - 3267187 + | putative GTP-binding protein TERM 4430 3267995 - 3268006 + G 74 -5.8 -4.52857 | CATCCACAGTCTGGT CGCT GAAG AGCG TTTTATCTCCGCCCT yfjR 3267390 - 3268070 + | putative HTH-type transcriptional regulator ECS88_3307 3268113 - 3268895 + | conserved hypothetical protein; putative exported protein ECS88_3308 3268901 - 3269134 + | hypothetical protein TERM 4431 3269156 - 3269183 + F 100 -19.2 -4.61873 | TCATTTCATCCATCA GGCCGCGTCTTC TCCG GGAGACGCGGCC TTTTCATTTATACCG ECS88_3309 3269224 - 3270042 + | hypothetical protein ECS88_3311 3270133 - 3270618 + | putative antirestriction protein (klcA-like) TERM 4432 3270875 - 3270839 - g 74 -8.8 -3.92963 | gap 1 GAACAACCAGAATAA GCTGATTGCCGGTGAAA CCCT CTTCACCGGCA-CCATC AACCGCACGGAAGTC yeeS 3270663 - 3271109 + | putative DNA repair protein; CP4-44 prophage yeeT 3271178 - 3271399 + | conserved hypothetical protein; CP4-44 prophage TERM 4433 3271731 - 3271694 - gf 76 -8.5 -4.00042 | gap 1 CTGCTGATGAAACAA CTGGAACTCATGCTCACC AGC GGTGAAC-TGAATCCCCG CCATCAGCATACCAT yeeU 3271478 - 3271855 + | antitoxin of the YeeV-YeeU toxin-antitoxin system; CP4-44 prophage TERM 4434 3272135 - 3272111 - gf 70 -7.2 -3.90048 | gap 2 TCTCGTTGAAAAATA CGCGCTGGTACG TAC CG-ACCAGC-CG GGATTCAGCGCAGGA yeeV 3271788 - 3272279 + | toxin of the YeeV-YeeU toxin-antitoxin system yeeW 3272276 - 3272764 + | hypothetical protein ECS88_3317 3272731 - 3272973 + | hypothetical protein TERM 4435 3273003 - 3273025 + F 86 -9.9 -4.39166 | gap 1 ACTTCATTCCCCTGA CGCCAGCCTG AATA CAG-CTGGCG TTTTCGTCTATAAAC ECS88_3318 3273058 - 3273903 + | hypothetical protein ECS88_3319 3273974 - 3275509 + | conserved hypothetical protein; putative EAL domain TERM 4436 3275710 - 3275726 + F 100 -10.8 -5.10154 | opp_overlap 3275710 CACTATTCTAAAGAA CCCGCC CACAA GGCGGG TTTTTGCTTTTGGAT TERM 4437 3275726 - 3275710 - f 91 -11.5 -3.94634 | opp_overlap 3275710 CACTATTCTAAAGAA CCCGCCC ACA AGGCGGG TTTTTGCTTTTGGAT TERM 4438 3276552 - 3276565 + F 74 -3.9 -4.89233 | opp_overlap 3276552 TTACGAGGAAATAAT CAATT GATA AATTG TTTTTGGTCTTAATA TERM 4439 3277283 - 3277269 - g 70 -4.2 -4.65895 | opp_overlap 3277270, overlap 3277270 TCCTTCACTGAAAAA TTTCGG CAA CCGAAT TATCGCCATTACCAA kpsF 3276850 - 3277869 + | Polysialic acid capsule expression protein kpsE 3277941 - 3279089 + | Capsule polysaccharide export inner-membrane protein kpsD 3279110 - 3280789 + | Polysialic acid transport protein precursor kpsU 3280799 - 3281539 + | 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) TERM 4440 3281586 - 3281611 + G 77 -8.3 -4.08706 | opp_overlap 3281587, overlap 3281587 TCCGCATCTGGAGAA ATTTCTGGCGC AACC GTGCCAGAAAC TTTCTCTGCTGCGCC TERM 4441 3281610 - 3281587 - g 78 -9.6 -3.87815 | opp_overlap 3281587 3281586 CCGCATCTGGAGAAA TTTCTGGCGC AACC GTGCCAGAAA CTTTCTCTGCTGCGC TERM 4442 3281587 - 3281610 + G 75 -11.8 -3.04902 | opp_overlap 3281587, overlap 3281586 CCGCATCTGGAGAAA TTTCTGGCGC AACC GTGCCAGAAA CTTTCTCTGCTGCGC TERM 4443 3281688 - 3281646 - g 72 -10.4 -3.28745 | overlap 3281641 TCCGCAAGAAGTTAA TGCTATCGCCGTGTGGGGAC ATC GTCCCAGCGCGGCGAAACCA GTCGCCATCGCCAAA TERM 4444 3282377 - 3282397 + G 77 -6.1 -4.60041 | TATCTGCCCGACGCG GTTCTGCCA CGC TGGAGGAAC TTTTTGCCGCTGCAT kpsC 3281536 - 3283563 + | Capsule polysaccharide export protein TERM 4445 3283655 - 3283668 + G 79 -3.7 -5.09225 | TATCTGCTATTGCAG GGGCC GATG GGACC TTTTTTCAATGACGT kpsS 3283598 - 3284803 + | Capsule polysaccharide export protein TERM 4446 3286120 - 3286108 - T 87 -5.5 -5.32944 | TTTAGAATTAAAAAA CCATG AGT CACGG AAAAACCCAATTGGA neuE 3287407 - 3286172 - | polysialic acid biosynthesis protein neuC 3288488 - 3287313 - | UDP-N-acetylglucosamine 2-epimerase neuA 3289741 - 3288485 - | N-acylneuraminate cytidylyltransferase neuB 3290781 - 3289741 - | N-acylneuraminate-9-phosphate synthase neuD 3291401 - 3290778 - | NeuD protein involved in sialic acid synthesis TERM 4447 3291121 - 3291089 - G 90 -7.1 -5.1356 | opp_overlap 3291115 TTTTACCAATAAAAA TTCCATCACCCAGTA TAA TATTTGGTGATAGAA TAGCAGTTTTATCTA kpsT 3292110 - 3291451 - | Polysialic acid transport ATP-binding protein kpsM 3292943 - 3292107 - | Polysialic acid transport protein TERM 4448 3293033 - 3293022 - R 79 -3 -5.42862 | opp_overlap 3293022, overlap 3293024 ATAGCCGCAAAAAAA TTTC AGCA GAAA TTATTTCCGCAGGGA TERM 4449 3293154 - 3293171 + r 100 -5.7 -5.66229 | opp_overlap 3293157, overlap 3293162 TTTAGAATGCAGAGT TAATTTC TCAG GAAATTA TTTTTTGTTATTACT yghD 3294477 - 3293941 - | putative secretion pathway M-type protein, membrane anchored yghE 3295657 - 3294479 - | putative secretion pathway protein, L-type protein TERM 4450 3294730 - 3294748 + g 74 -3 -5.00884 | overlap 3294732 CGAGCAGCCGGGTAT CATCGGCC TGC GGGCGATA TTTTTTCAGCGCCAT ECS88_3337 3296631 - 3295654 - | putative type II secretion protein (GspK-like) TERM 4451 3296396 - 3296378 - G 100 -10.2 -5.03314 | opp_overlap 3296378 3296377, overlap 3296390 GGCAGTGGGAAAAAA CGCGGGCC AGA AGCCCACG GTTGTGCCAGATGCA ECS88_3338 3297233 - 3296628 - | conserved hypothetical protein; putative exported protein TERM 4452 3297190 - 3297179 - G 77 -5.8 -4.67353 | CCAGTGAGGCAAAAA TGGC TATC GCCA CCAGCATTTCCAGTA ECS88_3339 3297601 - 3297230 - | putative type II secretion protein (GspI-like) TERM 4453 3297567 - 3297556 - G 77 -5.8 -4.62783 | CAGCCAGCGCAAAAA TCGC CAGC GCGA GCATCACTTCCAGCA ECS88_3340 3298161 - 3297598 - | conserved hypothetical protein; putative exported protein TERM 4454 3297928 - 3297912 - G 93 -12.3 -3.85817 | overlap 3297898 ACCGGGTCGCAGAAA CGGGCAA CCA TTGCCCG TGACGACGCTGCATA ECS88_3341 3298647 - 3298165 - | putative general secretion pathway protein G precursor (epsG-like) TERM 4455 3298468 - 3298491 + g 72 -5.3 -4.46072 | gap 1 CAGCGCCACGATATC GCTGAT-GGC TTTTT GCCGATCGGC TTTCTCTTTGTTGCC epsF 3299860 - 3298637 - | General secretion pathway protein F TERM 4456 3298881 - 3298899 + g 75 -11.6 -2.84098 | opp_overlap 3298870 3298868 3298871, overlap 3298878 AACAGGCGCAGATCC GCCAGCGC GGC GCGCAGGC TGCTTCCTTCGCGGA TERM 4457 3299061 - 3299040 - G 70 -4.3 -4.57341 | overlap 3299041 AACGTGCGGGAAAAA CGCGCCG TATTCAGT CCGCGCG CAACACGCCCCGTCA epsE 3301353 - 3299860 - | general secretion pathway protein E TERM 4458 3300669 - 3300682 + g 75 -4.5 -4.83169 | opp_overlap 3300654 3300653, overlap 3300670 CCAGACGCTCCAGCG TCAGG CGAG CCTGG TTTTTGTCCAGCAGT TERM 4459 3301092 - 3301072 - G 83 -5.3 -5.05782 | opp_overlap 3301074, overlap 3301074 AGCGAGGGTAAAAAA GTCCTCGGC GGA ACCGAGATC TTCCATCAGCTGGCG epsD 3303413 - 3301353 - | general secretion pathway protein D precursor TERM 4460 3303200 - 3303211 + g 72 -4.4 -4.68103 | CCTGAACGCCCGGCC CCAT AATG ATGG TTTTATTAAGGTTAG TERM 4461 3303340 - 3303318 - G 81 -10.6 -3.59946 | CGGTGAACTACACAA TGCCGCTG CCAGCAT CAGCGGCA GTAAACGCTTTTTTG yghF 3304273 - 3303443 - | putative secretion pathway protein, C-type protein TERM 4462 3303794 - 3303805 + g 84 -3.6 -5.1861 | overlap 3303793 3303792 AGCTTGCTTTGCTTC GTCG CTGG CGGC TTTTTTGCTGGTCAC TERM 4463 3304153 - 3304165 + g 70 -6.2 -4.16016 | opp_overlap 3304142, overlap 3304160 CGAACGGTTTTGCAT CCGC ACGGA GCGG TTTATTCACCGATGA TERM 4464 3304386 - 3304372 - R 78 -8.6 -4.13872 | ATTGAATGAGATAAA TTCGTG CGT CACGAA AAACAACCCGCGCCA yghG 3304830 - 3304420 - | hypothetical protein TERM 4465 3304723 - 3304738 + g 93 -10.4 -4.50058 | TTGCGCCTGTTTTTT CGCCAG TAAA CTGGCG TTTTCATTATGGCTG pppA 3305705 - 3304896 - | bifunctional prepilin leader peptidase and methylase TERM 4466 3305788 - 3305821 + r 100 -14.7 -3.54475 | gap 1, opp_overlap 3305786 3305785, overlap 3305775 CAGGCCCGATAAGCT GGCGCATCGGG-CA TATGTGT TGACCCGATGCGCC TTATATCATGCCGGA TERM 4467 3305861 - 3305830 - R 70 -10 -2.62263 | opp_overlap 3305840 ATGCGCCTTATATCA TGCCGGATGCGGCG TGAA CGCCTTATCCGGCC TACAGGCTTACTCGG yghJ 3310449 - 3305869 - | inner membrane lipoprotein TERM 4468 3310878 - 3310906 + r 77 -8.9 -3.73068 | opp_overlap 3310875 3310869 3310879, overlap 3310879 GAATAATGTAAACGA AGCCGGATGAT ATTAACG ATCATCCGGCA TTATTGACTTACGAA TERM 4469 3310905 - 3310879 - R 95 -12.4 -3.58779 | opp_overlap 3310878 3310879, overlap 3310875 3310869 AATAATGTAAACGAA GCCGGATGAT ATTAACG ATCATCCGGC ATTATTGACTTACGA TERM 4470 3310879 - 3310905 + r 82 -12.4 -2.8352 | opp_overlap 3310879 3310875 3310869, overlap 3310878 AATAATGTAAACGAA GCCGGATGAT ATTAACG ATCATCCGGC ATTATTGACTTACGA yghK 3312597 - 3310915 - | glycolate transporter TERM 4471 3311257 - 3311245 - G 71 -3.3 -4.86033 | overlap 3311256 AAACGGTGAGAAAAA CGGGA ACA TCACG CCTGTACCTGCCAGT TERM 4472 3311461 - 3311448 - G 81 -4.5 -5.06414 | overlap 3311434 3311451 TCGCCGCAATAAAAA TAGCG GTGC CGCCA GCCGAGAGAGGGTCG TERM 4473 3311767 - 3311779 + g 72 -5.5 -4.56597 | TTGTCCCATGCTGAT TGCCG TTT CGGTA TTTTTCGGCCGCCAG TERM 4474 3312101 - 3312091 - G 72 -8.2 -3.794 | GCCCAACGCACCAAA CGCC ACC GGCG CAGTGTTGGCAATCA TERM 4475 3312189 - 3312167 - G 73 -12 -2.82635 | AGGCCCACCAGTAGA GCACCGGTAA TCG CCACCGGTGC GCCAAAGCCAGCCGC TERM 4476 3312938 - 3312913 - R 82 -12.6 -2.83164 | opp_overlap 3312913 GCAGTTACTATCATA GCCCCGACAA TAAATC TTGCCGGGGC TTTTTTTGACGCTAT TERM 4477 3312913 - 3312938 + r 100 -10.4 -5.42862 | opp_overlap 3312913 GCAGTTACTATCATA GCCCCGACAA TAAATC TTGCCGGGGC TTTTTTTGACGCTAT glcB 3315124 - 3312953 - | malate synthase G glcG 3315550 - 3315146 - | hypothetical protein TERM 4478 3315352 - 3315367 + g 72 -7.5 -3.96327 | TTTCACGACGCCCCA GCGCG GCGGTA CGCGC TTTCTCCTGGGAGAT glcF 3316778 - 3315555 - | glycolate oxidase iron-sulfur subunit TERM 4479 3316743 - 3316703 - G 79 -12.4 -3.07575 | opp_overlap 3316695 3316703, overlap 3316693 3316705 3316707 AAAATCCGCAGTGAA CACAGGCGCGCAGGATGC TGTCG GCTTCCAGCGCGCGCGCG TTCTGCCGCATCTCT TERM 4480 3316741 - 3316705 - G 75 -11.4 -3.09175 | opp_overlap 3316703 3316695, overlap 3316703 3316693 3316707 AATCCGCAGTGAACA CAGGCGCGCAGGATGC TGTCG GCTTCCAGCGCGCGCG CGTTCTGCCGCATCT glcE 3317841 - 3316789 - | glycolate oxidase FAD binding subunit TERM 4481 3316911 - 3316874 - G 85 -9.7 -4.19678 | gap 1, overlap 3316875 TGATAGCGGAATAAA GGTGCCGGTAGCGG-GGC AAA GCCACCGTCTCCGGCACT AAACCGGGTCGCATG TERM 4482 3316910 - 3316875 - G 83 -13.2 -3.11325 | gap 1, overlap 3316874 GATAGCGGAATAAAG GTGCCGGTAGCGG-GGC AAA GCCACCGTCTCCGGCAC TAAACCGGGTCGCAT glcD 3319340 - 3317841 - | glycolate oxidase subunit, FAD-linked glcC 3319591 - 3320355 + | DNA-binding transcriptional dual regulator, glycolate-binding yghO 3321504 - 3320362 - | putative DNA-binding transcriptional regulator TERM 4483 3320917 - 3320928 + g 90 -4.4 -5.40072 | CACTTTTTTGCGCAC CTGA TCCA TCAG TTTTTTTAGCGCCGG TERM 4484 3322108 - 3322085 - H 86 -7.4 -5.09426 | gap 1, opp_overlap 3322090 CTGAACCTGAAAAAA GGCGATC-GCG TGG CGCTGATTGCC GAAACGAGTAGCGGG ECS88_3358 3323386 - 3324510 + | putative epimerase ECS88_3359 3324542 - 3324790 + | hypothetical protein ECS88_3360 3324790 - 3325962 + | Putative 8-amino-7-oxononanoate synthase TERM 4485 3326000 - 3325963 - T 100 -13.5 -3.30741 | gap 1, opp_overlap 3325965 3325969, overlap 3325964 ACTCAGAAGCAGTAA TGTGAACCCGCCGTGGTG TTG CGCCACGGCGGGTTTA-A TGTTGTCTGTCATAC TERM 4486 3326000 - 3325964 - T 89 -15.1 -2.57963 | opp_overlap 3325965 3325969, overlap 3325963 CTCAGAAGCAGTAAT GTGAACCCGCCGTGGTG TTG CGCCACGGCGGGTTTAA TGTTGTCTGTCATAC TERM 4487 3325965 - 3325999 + T 100 -23 -2.62712 | opp_overlap 3325963 3325964, overlap 3325969 TCAGAAGCAGTAATG TGAACCCGCCGTGGTG TTG CGCCACGGCGGGTTTA ATGTTGTCTGTCATA TERM 4488 3325969 - 3325995 + T 100 -21.6 -3.99878 | opp_overlap 3325963 3325964, overlap 3325965 AAGCAGTAATGTGAA CCCGCCGTGGTG TTG CGCCACGGCGGG TTTAATGTTGTCTGT ECS88_3361 3327157 - 3325997 - | hypothetical protein ECS88_3362 3328143 - 3327073 - | hypothetical protein TERM 4489 3327513 - 3327540 + gr 72 -7.8 -3.90318 | gap 1, opp_overlap 3327512, overlap 3327518 GATCGAGAAGATAGG CGGTACCGTTATG CAA CATAACGGT-CGG TTTCTCGGGTGATGG TERM 4490 3327518 - 3327536 + gr 79 -11.8 -2.7083 | opp_overlap 3327512, overlap 3327513 AGAAGATAGGCGGTA CCGTTATG CAA CATAACGG TCGGTTTCTCGGGTG ECS88_3363 3328734 - 3328174 - | Putative transcriptional regulator ECS88_3364 3329570 - 3328734 - | hypothetical protein ECS88_3365 3330919 - 3329570 - | putative membrane protein, conserved protein yghR 3331723 - 3330965 - | conserved hypothetical protein; putative nucleoside triphosphate hydrolase domain TERM 4491 3331417 - 3331441 + g 72 -7 -4.24384 | opp_overlap 3331417 3331420, overlap 3331412 AGAAGCAGTACATAA TCACCGCCGC CCATA GCGCCGGAGA TTTGGTTTTCATGCT yghS 3332468 - 3331755 - | conserved hypothetical protein; putative nucleoside triphosphate hydrolase domain yghT 3332643 - 3333335 + | conserved hypothetical protein; putative nucleoside triphosphate hydrolase domain TERM 4492 3333377 - 3333343 - T 100 -13.7 -4.68994 | opp_overlap 3333349 ATCACTAGTGAAAAA TGGAAATGCCCGATC GCCAG GACCGGGCATTTTCA GGAAGGTTAAATCAA TERM 4493 3333349 - 3333371 + T 80 -9.1 -4.08692 | opp_overlap 3333343 AGTGAAAAATGGAAA TGCCCGATC GCCAG GACCGGGCA TTTTCAGGAAGGTTA pitB 3334883 - 3333384 - | phosphate transporter TERM 4494 3335160 - 3335124 - R 100 -16.8 -3.16668 | opp_overlap 3335114 3335125, overlap 3335112 3335114 GAATATTTTGATTAA TCCCCGTACTGATTAT TCTTC ATAATCAGTACGGGGT TGCTACAACATGTAT TERM 4495 3335125 - 3335159 + r 100 -20.3 -3.15249 | opp_overlap 3335124 3335112 3335114, overlap 3335114 AATATTTTGATTAAT CCCCGTACTGATTAT TCTTC ATAATCAGTACGGGG TTGCTACAACATGTA gss 3337034 - 3335175 - | fused glutathionylspermidine amidase ; glutathionylspermidine synthetase TERM 4496 3335792 - 3335806 + g 74 -10 -3.54919 | GCAGTTCCTCTAACC CGCGTA AAA TACGCG TTTCAAAGCCTGCTT yghU 3337239 - 3338105 + | S-transferase TERM 4497 3338177 - 3338146 - T 79 -12.2 -2.58892 | overlap 3338132 3338156 3338157 ATCCAGACCAATGTA GGCCGGATAAGGCG TTCA CGCCGCATCCGGCA ATCGAGCACAATGCC TERM 4498 3338222 - 3338189 - T 75 -9.5 -3.44319 | opp_overlap 3338196 3338197 3338199, overlap 3338157 3338190 GGCAATCGAGCACAA TGCCTGATGCGACGC TGCC GCGTCTTATCAGGCC TACAAAAGCTAATCA TERM 4499 3338221 - 3338190 - T 84 -13 -2.6627 | opp_overlap 3338196 3338197 3338199, overlap 3338157 3338189 GCAATCGAGCACAAT GCCTGATGCGACGC TGCC GCGTCTTATCAGGC CTACAAAAGCTAATC hybG 3338486 - 3338238 - | hydrogenase 2 accessory protein hybF 3338840 - 3338499 - | protein involved with the maturation of hydrogenases 1 and 2 hybE 3339321 - 3338833 - | hydrogenase 2-specific chaperone TERM 4500 3338883 - 3338865 - G 83 -12.4 -3.34398 | opp_overlap 3338864, overlap 3338836 3338863 TCCTGCGGCCAAATA GCAGGGCA CGA CGCCCTGC GTGTGGTACATCCGG hybD 3339808 - 3339314 - | maturation element for hydrogenase 2 TERM 4501 3339455 - 3339470 + g 70 -4.6 -4.57569 | TGATTCCGGGATCAC GCCGAC CAGG GTCAGC TTTTTCGGAAACTCG hybC 3341511 - 3339808 - | hydrogenase 2, large subunit TERM 4502 3341357 - 3341371 + g 72 -4.9 -4.61633 | opp_overlap 3341349, overlap 3341360 3341364 ACAATCATCCATGCA TCGCG CGGAT CGCGG TTTTTCACGATCTCT TERM 4503 3341530 - 3341541 + r 77 -4.4 -5.07652 | overlap 3341519 3341524 TTGCTCGCCTCATGA CGAT TATG ATCG TTTTGTTTTAAAGGA hybB 3342686 - 3341508 - | hydrogenase 2 cytochrome b type component hybA 3343662 - 3342676 - | hydrogenase 2 4Fe-4S ferredoxin-type component TERM 4504 3343319 - 3343332 + g 72 -6.7 -4.29106 | CAGTTCGGATCGACG CAGTG CATA CACTG TTTCTTAATGTACGC hybO 3344783 - 3343665 - | hydrogenase 2, small subunit TERM 4505 3343784 - 3343820 + g 70 -6.6 -4.03234 | gap 1, opp_overlap 3343778 AACCAATAGCGCCTG CCGAGACGTTGCCGC CTTCTTTA GCGTTAACGTC-CGG TTTCTGTGAACGCGG ECS88_3380 3344975 - 3344790 - | hypothetical protein yghW 3345259 - 3344972 - | hypothetical protein TERM 4506 3345272 - 3345297 + r 72 -8.5 -3.63744 | overlap 3345271 CATCGTTCACCTCAT TCGTTATATAT TGTC ATATATAGCGA TATTTTAGGCAAAGA ECS88_3382 3346304 - 3345378 - | putative enzyme yghZ 3346422 - 3347462 + | aldo-keto reductase TERM 4507 3347494 - 3347474 - T 100 -16.1 -3.62775 | overlap 3347463 ATGACCTGTTAATAA CGGGCGCGA GAA CCGCGCCCG AATCAGATCAGTGAT yqhA 3347996 - 3347502 - | conserved hypothetical protein; putative inner membrane protein yghA 3348187 - 3349071 + | putative glutathionylspermidine synthase, with NAD(P)-binding Rossmann-fold domain TERM 4508 3349074 - 3349106 + T 100 -8.4 -5.34381 | opp_overlap 3349077, overlap 3349056 3349075 3349077 GCATTTAGGTTAAAA AAATGCCCGGTTGT GAAAA GCAACCGGGCATCA TTTTTATTTCGCTTT TERM 4509 3349075 - 3349105 + T 93 -11.9 -3.78189 | opp_overlap 3349077, overlap 3349056 3349074 3349077 CATTTAGGTTAAAAA AATGCCCGGTTGT GAAAA GCAACCGGGCATC ATTTTTATTTCGCTT TERM 4510 3349077 - 3349103 + T 100 -14.5 -3.45131 | opp_overlap 3349077, overlap 3349056 3349075 3349074 TTTAGGTTAAAAAAA TGCCCGGTTGT GAAAA GCAACCGGGCA TCATTTTTATTTCGC TERM 4511 3349103 - 3349077 - T 100 -13.8 -5.44119 | opp_overlap 3349056 3349077 3349075 3349074 TTTAGGTTAAAAAAA TGCCCGGTTG TGAAAAG CAACCGGGCA TCATTTTTATTTCGC exbD 3349535 - 3349110 - | membrane spanning protein in TonB-ExbB-ExbD complex exbB 3350276 - 3349542 - | membrane spanning protein in TonB-ExbB-ExbD complex TERM 4512 3350525 - 3350515 - H 75 -4.6 -4.89852 | CCAGACGTATAAAAA CAGG AAT CCCG ACATGGCGGACAAAA TERM 4513 3350599 - 3350582 - g 74 -2 -5.1675 | gap 1 GGACGCAGCAAAAAA TACACGC TCGGT GCG-GTA AATAGCGTGATTCAG TERM 4514 3350675 - 3350659 - g 70 -5.8 -4.20888 | opp_overlap 3350672, overlap 3350671 GGAAGCCAAAAAACA CGCGAC ACGTA ATCGCG CCAATGGCGAGTTGT metC 3350528 - 3351715 + | cystathionine beta-lyase, PLP-dependent TERM 4515 3352217 - 3352243 + G 73 -4.2 -4.76213 | CATGTTTGACCGCCA CGGTCTGCTGGC GCT GCTGGCTGGACG TTTTCTTGCATTTGT yghB 3351855 - 3352514 + | conserved hypothetical protein; putative inner membrane protein TERM 4516 3352523 - 3352552 + T 72 -7.8 -3.91911 | overlap 3352525 CGCCTGACGATTTTC CCCGTTCCCGGT TGCTGT ACCGGGAACGTA TTTAATTCCCCTGCA TERM 4517 3352525 - 3352550 + T 100 -14.8 -3.5486 | overlap 3352523 CCTGACGATTTTCCC CGTTCCCGGT TGCTGT ACCGGGAACG TATTTAATTCCCCTG yqhC 3353510 - 3352554 - | putative DNA-binding transcriptional regulator TERM 4518 3352689 - 3352713 + g 76 -10.7 -3.29144 | GCTGGCCTTCATGCC GTCGTGGATGA TCA TCATCCGCGCC TTATGCAGACGGTAA TERM 4519 3354550 - 3354535 - g 75 -4.6 -4.8622 | CTGTGGAATGAAAAA CGCGAT ACCA AGCGCG CTAAGCTGCTGCAAT yqhD 3353647 - 3354810 + | alcohol dehydrogenase, NAD(P)-dependent TERM 4520 3354897 - 3354868 - f 80 -10.7 -3.36968 | opp_overlap 3354871, overlap 3354870 3354871 GACTTAAGTTCACAA CACCTCACCGGAG CCTG CTCCGGTGAGTTC ATATAAAGGAGGAAC TERM 4521 3354895 - 3354870 - f 91 -13.3 -3.25192 | opp_overlap 3354871, overlap 3354868 3354871 CTTAAGTTCACAACA CCTCACCGGAG CCTG CTCCGGTGAGT TCATATAAAGGAGGA TERM 4522 3354894 - 3354871 - f 100 -16.8 -2.54794 | opp_overlap 3354871, overlap 3354870 3354868 TTAAGTTCACAACAC CTCACCGGAG CCTG CTCCGGTGAG TTCATATAAAGGAGG TERM 4523 3354871 - 3354894 + F 100 -16.8 -3.25823 | opp_overlap 3354871 3354870 3354868 TTAAGTTCACAACAC CTCACCGGAG CCTG CTCCGGTGAG TTCATATAAAGGAGG dkgA 3354915 - 3355742 + | 2,5-diketo-D-gluconate reductase A TERM 4524 3355754 - 3355784 + F 72 -7.4 -4.10429 | overlap 3355755 CTAACGTGCAAATTC TCCCGGTGGCGGTA ATG TTCCGCTACCGGAC TTTTCAGAAATCATT TERM 4525 3355755 - 3355783 + F 76 -10.9 -3.05775 | overlap 3355754 TAACGTGCAAATTCT CCCGGTGGCGGTA ATG TTCCGCTACCGGA CTTTTCAGAAATCAT yqhG 3355942 - 3356868 + | hypothetical protein yqhH 3356919 - 3357176 + | putative outer membrane lipoprotein TERM 4526 3357183 - 3357213 + T 93 -10.4 -5.0538 | opp_overlap 3357185, overlap 3357185 GCAGAATGATAAAAA AATCCCCGGCAGCA TTC TGTTACCGGGGATA TTTTTTAACGTCCAA TERM 4527 3357211 - 3357185 - T 100 -13 -5.73339 | opp_overlap 3357185 3357183 AGAATGATAAAAAAA TCCCCGGCAGCA TTC TGTTACCGGGGA TATTTTTTAACGTCC TERM 4528 3357185 - 3357211 + T 100 -13 -4.15748 | opp_overlap 3357185, overlap 3357183 AGAATGATAAAAAAA TCCCCGGCAGCA TTC TGTTACCGGGGA TATTTTTTAACGTCC ygiQ 3359437 - 3357218 - | hypothetical protein TERM 4529 3357277 - 3357289 + g 90 -4.8 -5.44119 | TCTGCAGGCGAGATT GCGT AGACG ACGC TTTTTTTGCCGTAGC ECS88_3397 3359689 - 3360438 + | putative regulator TERM 4530 3361280 - 3361296 + G 72 -6.5 -4.38171 | opp_overlap 3361280, overlap 3361294 TTGCAACAACGTAAA GCGGC AGGACTC GCCGC TTTTAGTGTGCTCTC TERM 4531 3361957 - 3361940 - g 75 -4.9 -4.77036 | TTGCATCAGCAAAAA CAAAACA ATGC TGTTCTG TCACTGCTCGTTGCT TERM 4532 3362171 - 3362160 - g 95 -5.8 -5.41941 | TAAATGAAATAAAAA TCGC CTTT GCGA ATATAAAAAACAAAG ECS88_3398 3360725 - 3362233 + | putative Fructuronate reductase ECS88_3399 3362230 - 3363246 + | putative L-threonine 3-dehydrogenase TERM 4533 3363711 - 3363721 + G 85 -8.2 -4.58395 | overlap 3363702 TGGCTCCCCATGGCG GCGC CGA GCGC TTTTTGGGAACTAAC ECS88_3400 3363257 - 3364267 + | Ureidoglycolate dehydrogenase ECS88_3401 3364340 - 3365323 + | putative c4-dicarboxylate transport system binding protein; putative secreted protein TERM 4534 3365332 - 3365348 + F 84 -9.4 -4.25283 | TATGTAACCCTAATG GGCAGG TAATT CCTGCC TTTTCATGGAAGACT ECS88_3402 3365365 - 3365847 + | putative membrane protein; putative TRAP-type C4-dicarboxylate transport system, small permease component ygiK 3365816 - 3367162 + | c4-dicarboxylate permease TERM 4535 3367226 - 3367191 - T 74 -10.5 -3.20382 | opp_overlap 3367193, overlap 3367192 CTGCATACTGAGTAA TTTTCAATGCCCCAC CACTCT GTGGGGCATTGAATT GGTCCATTACGGTAC TERM 4536 3367225 - 3367192 - T 86 -14 -2.52015 | opp_overlap 3367193, overlap 3367191 TGCATACTGAGTAAT TTTCAATGCCCCAC CACTCT GTGGGGCATTGAAT TGGTCCATTACGGTA TERM 4537 3367193 - 3367224 + T 100 -17.5 -3.22091 | opp_overlap 3367192 3367191 GCATACTGAGTAATT TTCAATGCCCCAC CACTCT GTGGGGCATTGAA TTGGTCCATTACGGT sufI 3368645 - 3367233 - | repressor protein for FtsI plsC 3369457 - 3368720 - | 1-acyl-sn-glycerol-3-phosphate acyltransferase parC 3371950 - 3369692 - | DNA topoisomerase IV, subunit A TERM 4538 3371121 - 3371142 + g 84 -10.9 -3.74693 | ACCATCGGCAGCTTT TTGTTGCGC ATTT GCGCAGCAA TTTGCTCCAGTACGC TERM 4539 3372079 - 3372053 - R 89 -15.1 -3.0497 | AGATCAGCGTGAATA GCGCCGCCGGA CGTGC TCCGGCGGCGA TAAAGGCATCAATGT ygiS 3373695 - 3372088 - | transporter subunit: periplasmic-binding component of ABC superfamily TERM 4540 3373375 - 3373358 - G 72 -5.5 -4.46926 | overlap 3373359 CAGCCGAGGACAAAA TCCTCTG CCGT CAGAGGC TGACCGTCTGACCAC ygiV 3374286 - 3373804 - | putative transcriptional regulator ygiW 3374731 - 3374339 - | hypothetical protein qseB 3374883 - 3375542 + | DNA-binding response regulator in two-component regulatory system with QseC TERM 4541 3375791 - 3375770 - g 70 -3.7 -4.72863 | CCAAATAAATTAAAA CACGGTCAT GTTG ATGACGATG CGCTGACTTTTGCCA qseC 3375539 - 3376888 + | sensory histidine kinase in two-component regulatory system with QseB TERM 4542 3376896 - 3376929 + T 100 -16.9 -3.78775 | opp_overlap 3376906 GCTGGTAACTTCTCT GTCTATGAGAGCCGT TAAA ACGACTCTCATAGAC TTTACTAATAGCAAA ygiZ 3377266 - 3376934 - | conserved hypothetical protein; putative inner membrane protein ECS88_3414 3378010 - 3377273 - | hypothetical protein ECS88_3415 3378465 - 3377986 - | hypothetical protein TERM 4543 3378832 - 3378777 - g 81 -12.6 -3.18199 | gap 1, opp_overlap 3378776 3378785 3378809, overlap 3378780 CAATGGTCAACTGAA CGACACCCTGACCGAAGTCGCGGA-TG GCA CACTGCGCGACCTCGGGCATGATGTCC GCATTGTTCGCGCCG TERM 4544 3378829 - 3378780 - g 81 -12.9 -2.78712 | gap 1, opp_overlap 3378776 3378785 3378809, overlap 3378777 TGGTCAACTGAACGA CACCCTGACCGAAGTCGCGGA-TG GCA CACTGCGCGACCTCGGGCATGATG TCCGCATTGTTCGCG mdaB 3378715 - 3379296 + | NADPH quinone reductase ygiN 3379327 - 3379641 + | quinol monooxygenase TERM 4545 3379677 - 3379654 - T 85 -8.1 -4.61231 | TGACATTTCTAAAAA GAGGCCGGT GCTGCT ACCGGTCTC AGCCCAGATTAGCCA ECS88_3418 3380573 - 3379686 - | putative bifunctional protein: transcriptional regulator and sugar phosphate isomerase ECS88_3419 3381580 - 3380570 - | putative iron compound-binding protein of ABC transporter family ECS88_3420 3382577 - 3381528 - | putative iron compound permease protein of ABC transporter family ECS88_3421 3383557 - 3382574 - | putative iron compound permease protein of ABC transporter family TERM 4546 3383017 - 3383044 + g 72 -8.4 -3.72374 | opp_overlap 3383016 3383014 3383013, overlap 3383014 GCCCCGCTAAATCAC CTGCTAGCCATG TCCG CATCGCCAGCAG TGTTTGTTCGTCAAG ECS88_3422 3384363 - 3383554 - | ferric enterobactin transport ATP-binding protein (fepC-like) TERM 4547 3384699 - 3384716 + H 89 -8.4 -4.62069 | AAGAAACAATTTTCA CTCGCG ACAATC CGCGAG TTTTTGGGATAACAG TERM 4548 3386831 - 3386818 - g 70 -6.7 -4.07133 | CATCGCCACAAATAA TCTGG GCAA CCAGA TTGGCGATCCGCGTG ECS88_3423 3384737 - 3386878 + | putative iron compound receptor TERM 4549 3386883 - 3386916 + T 100 -12.5 -4.95547 | opp_overlap 3386887, overlap 3386885 3386887 TGGAATTTTGATCAA AAAAGCCCGGTATAC ACTT GTATACCGGGCTATG TTTTATTCTTCTGGC TERM 4550 3386885 - 3386914 + T 100 -15.1 -4.08992 | opp_overlap 3386887, overlap 3386883 3386887 GAATTTTGATCAAAA AAGCCCGGTATAC ACTT GTATACCGGGCTA TGTTTTATTCTTCTG TERM 4551 3386887 - 3386912 + T 100 -17.7 -3.60952 | opp_overlap 3386887, overlap 3386885 3386883 ATTTTGATCAAAAAA GCCCGGTATAC ACTT GTATACCGGGC TATGTTTTATTCTTC TERM 4552 3386912 - 3386887 - T 100 -17.7 -5.14965 | opp_overlap 3386885 3386883 3386887 ATTTTGATCAAAAAA GCCCGGTATAC ACTT GTATACCGGGC TATGTTTTATTCTTC parE 3388834 - 3386942 - | DNA topoisomerase IV, subunit B TERM 4553 3387852 - 3387864 + g 75 -5.5 -4.72272 | opp_overlap 3387852 GTCTGCCCGGCAAAC TGCGG ATC CTGCA TTTTTACTGACAGCA yqiA 3389444 - 3388863 - | putative esterase cpdA 3390271 - 3389444 - | cyclic 3',5'-adenosine monophosphate phosphodiesterase yqiB 3390718 - 3390296 - | putative dehydrogenase TERM 4554 3390385 - 3390395 + g 83 -5.4 -5.08601 | GATGCTTTTCGTCGC GTTG ATG CAAC TTTTTATTAGGATAA TERM 4555 3390743 - 3390795 + r 72 -6.9 -4.20712 | overlap 3390751 CTCATTTTTTAACGC TTGATGATGCAGCTGCAGCCATTGC AAA GCGATGACCGACGCTGCGTTGTCGA TTTTCCCCTCTTCTA nudF 3391348 - 3390719 - | ADP-ribose pyrophosphatase TERM 4556 3392645 - 3392617 - g 77 -9.7 -3.61398 | TTCCTCCTTCAACAA CATTAATGCTTCT ATC AGTAGCATTAACG CCTACAAACAAGCCG tolC 3391553 - 3393034 + | transport channel TERM 4557 3393526 - 3393511 - g 70 -4.6 -4.46926 | CATGGCACCAGAAAA CCAGGC GCAG GCCCAG CAATCCAGCGGGAGT TERM 4558 3393712 - 3393682 - g 88 -8.3 -4.59773 | gap 1, overlap 3393683 3393685 CGCGACCGGTAAAAA CTATGGCGCAGCCC AGCC AGGCCGCACCAT-G ACCGTACCGAAGACG TERM 4559 3393710 - 3393685 - g 74 -11.1 -3.24422 | overlap 3393682 3393683 GACCGGTAAAAACTA TGGCGCAGCCC AGCC AGGCCGCACCA TGACCGTACCGAAGA TERM 4560 3393819 - 3393801 - g 70 -5.2 -4.41348 | CTGTTGCCAAACAAA GCACTATG CAG CGTAGCGC AACCGGCACCTCTTC ygiB 3393278 - 3393853 + | conserved hypothetical protein; putative outer membrane protein TERM 4561 3393921 - 3393965 + G 70 -10.2 -3.16742 | gap 1, opp_overlap 3393935, overlap 3393924 CCACGAATACGGTTT CAATTTTCACACCATGTACGG CGAG CCGTAC-TGGTGTGAAGATGC TTACTACAAGTTGAC TERM 4562 3393924 - 3393962 + G 100 -16.3 -2.78395 | gap 1, opp_overlap 3393935, overlap 3393921 CGAATACGGTTTCAA TTTTCACACCATGTACGG CGAG CCGTAC-TGGTGTGAAGA TGCTTACTACAAGTT ygiC 3393859 - 3395019 + | putative enzyme TERM 4563 3395030 - 3395054 + F 74 -10 -3.27475 | opp_overlap 3395032, overlap 3395028 3395032 AGTAATACAGCTTAA TATTGCCCCG ATAAG CGGGGCAATC TCTTATAATCCACCA TERM 4564 3395052 - 3395032 - f 83 -12.6 -3.09648 | opp_overlap 3395032 3395030 3395028 TAATACAGCTTAATA TTGCCCCG ATAAG CGGGGCAA TCTCTTATAATCCAC TERM 4565 3395032 - 3395052 + F 86 -12.6 -3.20322 | opp_overlap 3395032, overlap 3395030 3395028 TAATACAGCTTAATA TTGCCCCG ATAAG CGGGGCAA TCTCTTATAATCCAC TERM 4566 3396079 - 3396052 - g 82 -3.4 -5.24799 | gap 1, opp_overlap 3396068 3396070 TGAGAAAGATAAAAA TGCCGGTATCC TTGATGC GGGT-CCGGCA ACCGGCGCACTCCCT assT 3395504 - 3397300 + | arylsulfate sulfotransferase TERM 4567 3397559 - 3397537 - g 70 -3.5 -4.62069 | CCGGTATCGGAAAAA GTGAAAG ATATCGTTG CTTTCAC GCCATTCCATCTGGA dsbA 3397318 - 3397986 + | Thiol:disulfide interchange protein dsbA precursor ECS88_3434 3398001 - 3398672 + | putative protein-disulfide oxidoreductase TERM 4568 3398680 - 3398712 + T 100 -12 -4.66987 | opp_overlap 3398681 3398683, overlap 3398683 GAGGCTAACTCAGCA ACACCCGAAGCCAG TCGTT CTGGCTTCGGGTTC TTTTATTAACCTATC TERM 4569 3398711 - 3398681 - T 100 -15.5 -3.22091 | opp_overlap 3398680 3398683, overlap 3398683 AGGCTAACTCAGCAA CACCCGAAGCCAG TCGTT CTGGCTTCGGGTT CTTTTATTAACCTAT TERM 4570 3398683 - 3398709 + T 100 -18.1 -4.43909 | opp_overlap 3398681 3398683, overlap 3398680 GCTAACTCAGCAACA CCCGAAGCCAG TCGTT CTGGCTTCGGG TTCTTTTATTAACCT TERM 4571 3398709 - 3398683 - T 100 -18.1 -3.17319 | opp_overlap 3398683 3398680, overlap 3398681 GCTAACTCAGCAACA CCCGAAGCCAG TCGTT CTGGCTTCGGG TTCTTTTATTAACCT zupT 3399533 - 3398718 - | putative dioxygenase ygiE 3399649 - 3400422 + | zinc transporter TERM 4572 3400435 - 3400466 + T 73 -10.3 -3.01745 | opp_overlap 3400435 3400432 3400437, overlap 3400429 3400437 3400439 TAAAGACGATAATGA CAGATGTTGCC CATTGCTAAA GGCAACATCTG TATCGTTATTAAAGG TERM 4573 3400466 - 3400435 - T 82 -12.4 -2.90598 | opp_overlap 3400429 3400435 3400437 3400439, overlap 3400432 3400437 TAAAGACGATAATGA CAGATGTTGCCCAT TGCT AAAGGCAACATCTG TATCGTTATTAAAGG ECS88_3438 3400669 - 3400484 - | hypothetical protein TERM 4574 3400982 - 3400994 + H 72 -3.4 -5.00884 | GGCGTAAACCTTTGT CAAC AAACG GTTG TTTTTTCGCCGCAAT ygiL 3401225 - 3401788 + | putative fimbrial-like adhesin protein TERM 4575 3401844 - 3401825 - f 88 -12.2 -3.55563 | opp_overlap 3401823 ACGCCAGGCGGTAAA GCCGATGA AATT TCATCGGC AACTTTGGGCCTTTT TERM 4576 3402995 - 3402982 - g 74 -8.1 -4.11394 | ACGTCACTGGGAAAA CCGAC ATCC GTCGG GCATAACGATATCAA TERM 4577 3403516 - 3403494 - g 73 -3.5 -4.86621 | ATCTGTAAGCAAAAA CTTTGATAT TGGCG ATTTCAAAG GTATATCTGCATCGC yqiG 3401875 - 3404397 + | putative outer membrane usher protein TERM 4578 3404824 - 3404801 - g 88 -12.4 -3.66095 | overlap 3404815 AAATCGCCATGCAAA GCCGCCTGAA GCTA TTCTGGCGGC CAAAAGCGATTGAGT yqiH 3404404 - 3405153 + | putative periplasmic pilin chaperone TERM 4579 3405171 - 3405188 + G 77 -3.3 -5.12707 | overlap 3405173 ACGCTTTTTCGTTTA CTGGCGA TTCT TTGCCTG TTTTTTAACGTTTCA yqiI 3405150 - 3406199 + | putative fimbrial adhesin TERM 4580 3406232 - 3406204 - T 81 -12.5 -2.50779 | opp_overlap 3406204 3406209, overlap 3406209 ACTATAACTGAACAG CAAAATGCCGGGA ACA CCCCGGCATTTTC ATATTTAGTATTTCA TERM 4581 3406204 - 3406232 + T 79 -11.8 -2.74755 | opp_overlap 3406204 3406209, overlap 3406209 ACTATAACTGAACAG CAAAATGCCGGG AACAC CCCGGCATTTTC ATATTTAGTATTTCA TERM 4582 3406227 - 3406209 - T 100 -12.4 -4.44284 | opp_overlap 3406204 3406209, overlap 3406204 AACTGAACAGCAAAA TGCCGGGA ACA CCCCGGCA TTTTCATATTTAGTA TERM 4583 3406209 - 3406227 + T 100 -11.7 -4.51363 | opp_overlap 3406209 3406204, overlap 3406204 AACTGAACAGCAAAA TGCCGGG AACAC CCCGGCA TTTTCATATTTAGTA ribB 3406906 - 3406253 - | 3,4-dihydroxy-2-butanone-4-phosphate synthase TERM 4584 3406621 - 3406649 + g 90 -10.3 -4.41206 | opp_overlap 3406626 CTTCAATGGTCACGG TAAAACCGGTGCC ATA GGCGCTGGTGTTA TTTTCTACCATCATT TERM 4585 3407186 - 3407172 - H 71 -8.6 -3.4252 | GCGGATTCACTATAA CGCTAA TGA TTAGCG CCAGCAACGCATAGC yqiC 3407220 - 3407579 + | hypothetical protein TERM 4586 3407608 - 3407593 - T 100 -11.8 -4.95806 | opp_overlap 3407593 AAAGCACCACAAAAA CGGGCC AGAC GGCCCG TAATATCAGTGTTCT TERM 4587 3407593 - 3407608 + T 79 -11.8 -2.67055 | opp_overlap 3407593 AAAGCACCACAAAAA CGGGCC AGAC GGCCCG TAATATCAGTGTTCT glgS 3407814 - 3407614 - | putative glycogen synthesis protein TERM 4588 3408633 - 3408622 - g 74 -3 -4.99435 | overlap 3408616 CTGAAGAAGGAAAAA CTTT CACT AAAG GAGACAAAGTGTTAA yqiJ 3408084 - 3408713 + | conserved hypothetical protein; putative inner membrane protein TERM 4589 3408769 - 3408805 + G 74 -6.5 -4.4634 | overlap 3408771 TAATTCTGTGCCCTC CTGGATGTTTACCGCGA TTA TCGCCGTATGCATTCTG TTTATTATTGGAATT TERM 4590 3409971 - 3409955 - g 72 -4.4 -4.59919 | gap 1, opp_overlap 3409955, overlap 3409956 AAAGCAGAAAAAGAA GCC-GCA GAGA TGCAGGC GGCGGCTATCGTTGA yqiK 3408740 - 3410401 + | hypothetical protein TERM 4591 3410420 - 3410442 + T 100 -8.4 -5.4251 | opp_overlap 3410420 CTCTTCTATGAATAA TCCCTGGC CCAAAAA GCCGGGGA TTTTTTATATCTGCG TERM 4592 3410621 - 3410602 - T 91 -11.4 -3.71649 | opp_overlap 3410601 3410602, overlap 3410585 3410595 GGCTGAAACGGGAAA GCCCCTCC CGAG GAAGGGGC CTTATAGAAGGAAAG TERM 4593 3410602 - 3410621 + T 70 -10 -2.57132 | gap 1, opp_overlap 3410585 3410595 3410602, overlap 3410601 GGCTGAAACGGGAAA GCCCC-TCC CGA GGAAGGGGC CTTATAGAAGGAAAG rfaE 3412253 - 3410820 - | fused heptose 7-phosphate kinase ; heptose 1-phosphate adenyltransferase glnE 3415141 - 3412301 - | fused deadenylyltransferase ; adenylyltransferase for glutamine synthetase TERM 4594 3413294 - 3413269 - G 72 -11.1 -3.06261 | opp_overlap 3413261 3413291 CCGCAATGCGTAACA GCTGCGCCTGT TTGA ACTGACGCAGC GCCTCAAGCTGTTGT ygiF 3416465 - 3415164 - | putative adenylate cyclase TERM 4595 3415520 - 3415494 - G 72 -5 -4.65895 | opp_overlap 3415494, overlap 3415495 TTTGGCATCTAAAAA CGGCTGCCAGGC TTT GCTTACCAGCCA TTCGGTCAACGCCAG ECS88_3452 3416688 - 3416482 - | hypothetical protein TERM 4596 3417139 - 3417129 - g 83 -5.4 -5.093 | GTTAAAAGAAGAAAA TCAG AAA CTGA AAAACGAGCTGATTG htrG 3416707 - 3417327 + | putative signal transduction protein (SH3 domain) TERM 4597 3417497 - 3417524 + G 95 -11.2 -4.47397 | overlap 3417498 CACAGGAGATGCTCG ACGCGGGCTACC AGCA GGTAGGCCGCGA TTTTCCTGTGTTTCT TERM 4598 3417498 - 3417523 + G 95 -14.7 -3.26811 | overlap 3417497 ACAGGAGATGCTCGA CGCGGGCTACC AGCA GGTAGGCCGCG ATTTTCCTGTGTTTC TERM 4599 3417596 - 3417608 + G 82 -9.1 -4.22652 | opp_overlap 3417583 3417590 AACGGAAATCCGGTT CCGGT TAC ACCGG TTTTACCTGCTATGC TERM 4600 3417784 - 3417809 + G 78 -8.3 -4.2679 | gap 1, opp_overlap 3417783, overlap 3417784 3417793 3417795 3417799 GCTTTTGGCGAAGAT C-CGTTACGCGT GTT GCGCGTAGCGCG TTTTGCTGCGCGTTA TERM 4601 3417982 - 3418003 + G 75 -5.1 -4.63218 | gap 1, overlap 3417992 TTCTTCCAGGTACTG CGCG-ATTGC GGC GCACTGCGCG TTTTATTCCCGGAAA cca 3417391 - 3418629 + | fused tRNA nucleotidyl transferase ; 2'3'-cyclic phosphodiesterase and 2'nucleotidase and phosphatase TERM 4602 3418709 - 3418660 - T 81 -11.8 -3.06796 | gap 3, opp_overlap 3418653 3418678 3418695 3418696 3418708, overlap 3418705 3418707 3418708 CCGGATGCGACGTAA GCGTCTTATCCGG-CTAC-A-TGTC AAC GACAGTTGTAGGCCTGATAAGACGC GCGAGCGTCGCATCA TERM 4603 3418695 - 3418728 + T 74 -9.5 -3.34344 | opp_overlap 3418660 3418705 3418707 3418708, overlap 3418696 3418708 3418725 TCAACGACAGTTGTA GGCCTGATAAGACGC GCGA GCGTCGCATCAGGCG TTGATTGCCGGATGC TERM 4604 3418696 - 3418727 + T 84 -13 -2.60392 | opp_overlap 3418660 3418705 3418707 3418708, overlap 3418695 3418708 3418725 CAACGACAGTTGTAG GCCTGATAAGACGC GCGA GCGTCGCATCAGGC GTTGATTGCCGGATG bacA 3419638 - 3418817 - | undecaprenyl pyrophosphate phosphatase folB 3420097 - 3419729 - | bifunctioal dihydroneopterin aldolase ; dihydroneopterin triphosphate 2'-epimerase plsY 3420202 - 3420819 + | 1-acyl glycerol-3-phosphate synthetase component ygiP 3421764 - 3420832 - | putative DNA-binding transcriptional regulator TERM 4605 3421920 - 3421906 - H 73 -2.8 -5.06052 | opp_overlap 3421906 GCAAAAAATATAAAA CCAC ATTTTTA GTGG TAGTTTGTGGCGGTG ttdA 3421971 - 3422882 + | L-tartrate dehydratase, alpha subunit TERM 4606 3423433 - 3423418 - g 93 -4 -5.46706 | gap 1 AGCCGAAAACAAAAA GCTGTTC GCC GAAC-GC CGCGATCCCATCGTG ttdB 3422879 - 3423484 + | L-tartrate dehydratase, beta subunit TERM 4607 3423492 - 3423511 + F 90 -9.3 -4.83615 | opp_overlap 3423485 3423486 TCAAATAACCCTCCC GGAGAGG CTCGCC CCTCTCC TTTTTCTCAGGCATA TERM 4608 3423701 - 3423730 + G 100 -15.1 -3.92542 | TGCCGGGTGCCGTGG TGGCGATGGTGGG TATA TCCATCATCGCCA TTCTTTCGCCGTGGC ygjE 3423532 - 3424995 + | putative tartrate:succinate antiporter gcp 3426051 - 3425038 - | O-sialoglycoprotein endopeptidase TERM 4609 3425434 - 3425422 - G 72 -5.5 -4.50976 | overlap 3425429 TTTCAGACCAGAAAA GCTGA AAT CCAGC CCCGGACGGTCGGTC TERM 4610 3425970 - 3425985 + g 71 -3.2 -4.78107 | CCTGACTATACAATT GGTTGG CTAA CAAACC TTTTTCATCGTCGTA TERM 4611 3426256 - 3426239 - H 76 -8.4 -3.9281 | ACCATTTTGAAATAA GCTGGC GTTGAT GCCAGC GGCAAACCGAATTAA rpsU 3426289 - 3426504 + | 30S ribosomal subunit protein S21 TERM 4612 3426548 - 3426581 + F 82 -7.6 -4.62475 | overlap 3426552 ACCGAGTTGTAGTTG TAAGGCCGTGC-TTCC GAAA GGAATGCGCGGC-TTA TTTTCGTTTATGAAT TERM 4613 3426552 - 3426578 + F 90 -10.9 -4.40882 | gap 1, overlap 3426548 AGTTGTAGTTGTAAG GCCGTGC-TTCC GAAA GGAATGCGCGGC TTATTTTCGTTTATG TERM 4614 3427065 - 3427050 - g 70 -3.9 -4.60487 | CAGTATCTGGAAAAA CGCGG ATTAAG CCACG AGGTTATCGCCCGCT TERM 4615 3427947 - 3427914 - g 70 -5.9 -4.20696 | opp_overlap 3427914 3427925, overlap 3427906 CGATTAATGCCAAAA GCGGCAGAGAGCG GCGTTTCT CGCCCTGTTCCGC AGCTAAAACGCACGA dnaG 3426615 - 3428360 + | DNA primase TERM 4616 3429328 - 3429308 - g 73 -9.1 -3.60948 | GAAGAGATCCTGAAA CTGTCTGAA GTA TTCAAACAG TTCCGCCTGGTGCCG rpoD 3428555 - 3430396 + | RNA polymerase, sigma 70 (sigma D) factor TERM 4617 3430452 - 3430470 + T 100 -11.7 -5.24129 | opp_overlap 3430452 GTCCCTCCGCACAAA CGCCACC TTTTC GGTGGCG TTTTTTATCGCCCAC TERM 4618 3430470 - 3430452 - T 93 -11.7 -3.85698 | opp_overlap 3430452 GTCCCTCCGCACAAA CGCCACC TTTTC GGTGGCG TTTTTTATCGCCCAC ygjF 3430981 - 3430475 - | G/U mismatch-specific DNA glycosylase TERM 4619 3431193 - 3431214 + r 100 -14.5 -5.71295 | opp_overlap 3431193 ACCAGATATAGCAAA GGCTGACGA GAAA TCGTCAGCC TTTTTCTTTTTATAT TERM 4620 3431214 - 3431193 - R 100 -14.5 -3.91597 | opp_overlap 3431193 ACCAGATATAGCAAA GGCTGACGA GAAA TCGTCAGCC TTTTTCTTTTTATAT yqjH 3431999 - 3431235 - | putative siderophore interacting protein TERM 4621 3432399 - 3432442 + G 82 -8 -4.49556 | gap 1, overlap 3432400 CATGAACACGGTCAA TGCTG-CGGTGGTCGCCACGG TCG CGGCGGCGGTCGTCGGCAGCG TTTCTTTGGTCACGG TERM 4622 3432863 - 3432848 - g 100 -3.3 -5.72622 | opp_overlap 3432855 TGCACAAATAAAAAA GATCA TTGCGG TGATC GACCGCGCCGCTTTT yqjI 3432276 - 3432899 + | putative transcriptional regulator TERM 4623 3432944 - 3432900 - T 78 -10.6 -3.1886 | opp_overlap 3432917, overlap 3432901 ACGCAACTGGATTAA TCGCCGCATCCGCCAGTGGC GCGGT GCAATTGCCGGATGCGACGC TTGACGCGCCTTATC TERM 4624 3432943 - 3432901 - T 87 -14.1 -2.50994 | opp_overlap 3432917, overlap 3432900 CGCAACTGGATTAAT CGCCGCATCCGCCAGTGGC GCGGT GCAATTGCCGGATGCGACG CTTGACGCGCCTTAT TERM 4625 3432988 - 3433019 + T 77 -11.6 -2.64099 | opp_overlap 3432997 3432999, overlap 3432987 CTACACACCCCGTAG GCCTGATAAGATGC GCCA GCATCGCATCAGGC ATTGTGCTCCAACCG TERM 4626 3433068 - 3433097 + T 87 -11.3 -3.57144 | TTAATGCAGCACCGT CACCGCGTCTTCC AGTC GGCTGGCGCGGTG TTTCACCATCGCCGA aer 3434573 - 3433053 - | fused signal transducer for aerotaxis sensory component ; methyl accepting chemotaxis component TERM 4627 3434302 - 3434319 + g 70 -4.1 -4.59773 | opp_overlap 3434296, overlap 3434287 CGCACCCAATAATGG TCGCC ATTTTTGC GGCGA TTTTTCACGATGCCG TERM 4628 3434783 - 3434764 - H 72 -5.8 -4.57073 | gap 1, overlap 3434767 TATCTTGCCCAAAAA TCA-GGCAA TTA TTGCCCTGA AAGCGTGCATTTGCG ygjG 3434964 - 3436370 + | putrescine:2-oxoglutaric acid aminotransferase, PLP-dependent TERM 4629 3436376 - 3436408 + T 100 -12.8 -4.85599 | opp_overlap 3436378, overlap 3436378 AGAAGCGTAATATCA AATCGGATGGCGAT ACGAC GTCGCCATCCGATC TTTTTATACGATACG TERM 4630 3436406 - 3436378 - T 100 -14.7 -3.9344 | opp_overlap 3436378 3436376 AAGCGTAATATCAAA TCGGATGGCGA TACGACG TCGCCATCCGA TCTTTTTATACGATA TERM 4631 3436378 - 3436406 + T 100 -15.4 -4.05067 | opp_overlap 3436378, overlap 3436376 AAGCGTAATATCAAA TCGGATGGCGAT ACGAC GTCGCCATCCGA TCTTTTTATACGATA ygjH 3436744 - 3436412 - | tRNA-binding protein TERM 4632 3437890 - 3437872 - g 100 -10.2 -4.7373 | opp_overlap 3437884 CTAGTGTATGAAAAA GCCCGCGA TGG TCGCGCGC TGCCGCTGTTGGTCT ebgR 3436963 - 3437946 + | DNA-binding transcriptional repressor TERM 4633 3437953 - 3437995 + F 100 -11.4 -4.73614 | gap 1, overlap 3437954 3437955 ACCCGTTAAATCCCC TTGCA-CGCTGTCCGGCAA TCGTTT TTGCCGGACAGTGCTGCCG TTTATTTTCGTGATC TERM 4634 3437954 - 3437994 + F 93 -12.7 -3.43084 | gap 1, overlap 3437953 3437955 CCCGTTAAATCCCCT TGCA-CGCTGTCCGGCAA TCGTTT TTGCCGGACAGTGCTGCC GTTTATTTTCGTGAT TERM 4635 3437955 - 3437993 + F 100 -16.2 -2.64766 | gap 1, overlap 3437954 3437953 CCGTTAAATCCCCTT GCA-CGCTGTCCGGCAA TCGTTT TTGCCGGACAGTGCTGC CGTTTATTTTCGTGA TERM 4636 3438270 - 3438282 + G 91 -7.7 -5.03314 | GCTCTTAAGCGGTCA GTGGA ATT TCCAC TTTTTTGACCATCCG TERM 4637 3438953 - 3438940 - g 75 -4.5 -4.74103 | opp_overlap 3438934 3438940 TTGGCAATTGAAAAA CTGAC CAGC GCCAG TTTTGCTTTTACTGT TERM 4638 3439196 - 3439161 - g 72 -9.8 -3.41527 | gap 1 CAACCGCCACGACAA CGATC-ATCGCAAAGGC CGC GCCGTTGGGATGGATCG CGTCGAGAAAGATCT TERM 4639 3440093 - 3440071 - g 72 -7.6 -3.93664 | ACGCAACAGATTAAA CTGCGCGACG TTG CGCCGAACAG CGAAGCCCCCTTACA ebgA 3438130 - 3441222 + | cryptic beta-D-galactosidase, alpha subunit TERM 4640 3441637 - 3441649 + G 72 -7.7 -3.96216 | opp_overlap 3441637 3441634 3441633 TGGTTCTCAAAGTCA CCATC GAA GATGG TTATTTCCATAACAA ebgC 3441219 - 3441668 + | cryptic beta-D-galactosidase, beta subunit TERM 4641 3441705 - 3441669 - f 76 -8 -4.27512 | overlap 3441672 3441675 TTCCATAACAAATAA CAACTACGGCGGCAAA AGGAG TTTGCCGCCACTGCTA CCCTACTCATTTTCG TERM 4642 3441702 - 3441672 - f 84 -9.7 -4.24183 | overlap 3441669 3441675 CATAACAAATAACAA CTACGGCGGCAAA AGGAG TTTGCCGCCACTG CTACCCTACTCATTT TERM 4643 3441699 - 3441675 - f 81 -12.2 -3.09866 | overlap 3441672 3441669 AACAAATAACAACTA CGGCGGCAAA AGGAG TTTGCCGCCA CTGCTACCCTACTCA TERM 4644 3441977 - 3441963 - g 72 -5.6 -4.56775 | ACGCGTGGGTAAAAA GTTCGC TGG GCGGAC GTTGGGCATTTATTA TERM 4645 3442732 - 3442720 - g 70 -4.7 -4.45664 | CGAACTGAACGAAAA CGGCG TTC CGGCG CGCGCAGCGTGGATC ygjI 3441731 - 3443164 + | putative transporter TERM 4646 3443189 - 3443225 + F 93 -11.8 -4.04922 | gap 1, opp_overlap 3443184, overlap 3443183 3443191 TAAAAAATGAGCAGG C-ATTTTCCCTCTTCCT GGAT GGGGAGAGGGAAAATAG TTTCTGCCTTTATAT TERM 4647 3443191 - 3443222 + F 89 -14.6 -3.05274 | opp_overlap 3443184, overlap 3443189 3443183 AAAAATGAGCAGGCA TTTTCCCTCTTCCT GGAT GGGGAGAGGGAAAA TAGTTTCTGCCTTTA ygjJ 3443298 - 3444368 + | hypothetical protein TERM 4648 3444976 - 3444953 - g 78 -8.2 -4.15833 | gap 1 ACTATCAGCGCAAAA TCAGCGCCACC CGT GATGGC-CTGA AAGTCACCTTTGGCA ygjK 3444385 - 3446736 + | putative glycosyl hydrolase fadH 3446907 - 3448925 + | 2,4-dienoyl-CoA reductase, NADH and FMN-linked TERM 4649 3449028 - 3448997 - T 100 -21.8 -2.52795 | opp_overlap 3449007 3449023, overlap 3449007 AATGTGCTGAACGTA TGCCAGATAAGGCG TTTA CGCCTTATCTGGCA GGTAGCTGCCAATCT ygjO 3450179 - 3449043 - | putative methyltransferase small domain ygjP 3450264 - 3450767 + | putative metal dependent hydrolase TERM 4650 3451002 - 3451025 + G 76 -7.4 -4.24342 | gap 1, overlap 3451002 3451005 CTGGAGCGATGTCAA CGC-CGTTCCG GCG CGGAACGTGGG TTTATTGCTGGGGGC TERM 4651 3451005 - 3451021 + G 77 -12.3 -2.77283 | overlap 3451002 3451002 GAGCGATGTCAACGC CGTTCCG GCG CGGAACG TGGGTTTATTGCTGG ygjQ 3450844 - 3451536 + | putative thioredoxin-like TERM 4652 3452386 - 3452368 - g 70 -3.8 -4.65895 | opp_overlap 3452368 CTGGTGATTGAAAAA CTGTCTGA ATG CCAGAAAG TTTGCTTTGTACCGC ygjR 3451597 - 3452601 + | putative NAD(P)-binding dehydrogenase TERM 4653 3452778 - 3452759 - f 83 -10.8 -3.66178 | opp_overlap 3452759 CCGGGCAACCCGAAA GGAATACG CAGA CGTATTCC TTTTTTGTTGTAAGT TERM 4654 3452759 - 3452778 + F 100 -10.8 -5.56673 | opp_overlap 3452759 CCGGGCAACCCGAAA GGAATACG CAGA CGTATTCC TTTTTTGTTGTAAGT TERM 4655 3452817 - 3452796 - f 70 -10.1 -2.52464 | opp_overlap 3452798 TTTTGTTGTAAGTGA GACCTTGCC GGAA GGCGAGGTC TATGCATAAAAAGCA TERM 4656 3452834 - 3452859 + F 100 -9.7 -5.76633 | opp_overlap 3452834 ATGCATAAAAAGCAG CGGCTGATGTC TTCC GACGTTGGCCG TTTTTTTATGTGTAA alx 3452884 - 3453849 + | conserved hypothetical protein; putative inner membrane protein, part of terminus sstT 3454173 - 3455417 + | sodium:serine/threonine symporter TERM 4657 3455425 - 3455449 + T 100 -14.3 -4.44974 | GTAACTAATACTTAG CCCCTTTCGTC TAC GGCGGAAGGGG TTTTCTCCACTTTAA ygjV 3455972 - 3455421 - | conserved hypothetical protein; putative inner membrane protein TERM 4658 3456004 - 3456028 + r 100 -10 -5.4505 | opp_overlap 3456004 GTATGGAAAAGCAAA CGGCGCTTCA CATTA TGAAACGCCG TTTTTTATTAACAAC TERM 4659 3456028 - 3456004 - R 100 -12.9 -4.21922 | opp_overlap 3456004 GTATGGAAAAGCAAA CGGCGCTTCAC ATT ATGAAACGCCG TTTTTTATTAACAAC uxaA 3457542 - 3456055 - | altronate hydrolase TERM 4660 3456231 - 3456257 + g 77 -8.7 -4.11216 | TCCAGTGTTTTTTCT TCGCCGCCAGT TCACT GTTGGTGGCGA TTTTCACCGTCGGCA uxaC 3458969 - 3457557 - | uronate isomerase TERM 4661 3457776 - 3457755 - G 72 -7.9 -3.88291 | opp_overlap 3457756 3457768, overlap 3457768 CAGCATGCCGACAAA GCGGCTCAG CAGA CCGAGCTGC GCCAGTTGGGTCATC TERM 4662 3460310 - 3460330 + G 72 -8.9 -3.83502 | overlap 3460296 3460314 CTCGGTGGTTACCTG CCGCCGCTG TTC CAGCGTTGG TTTGGTGTGAACCTG TERM 4663 3460314 - 3460326 + G 73 -9.1 -3.59402 | overlap 3460296 3460310 GTGGTTACCTGCCGC CGCTG TTC CAGCG TTGGTTTGGTGTGAA exuT 3459332 - 3460750 + | hexuronate transporter TERM 4664 3460782 - 3460799 + F 100 -12.7 -4.7497 | opp_overlap 3460782 TAGTTTCCCTTCAAA GCCGCCT TCTC AGGCGGC TTTTTCATCACTGCG TERM 4665 3460799 - 3460782 - f 93 -12.7 -3.53224 | opp_overlap 3460782 TAGTTTCCCTTCAAA GCCGCCT TCTC AGGCGGC TTTTTCATCACTGCG TERM 4666 3461441 - 3461414 - g 74 -2.6 -5.0538 | overlap 3461416 CCGTACTGGAAAAAA CTGCACGAACAC ATTG ATGCCCGTACCG TCGATAACTGGTGTG exuR 3460880 - 3461656 + | DNA-binding transcriptional repressor TERM 4667 3461670 - 3461689 + F 86 -10.7 -4.0942 | opp_overlap 3461660 GAAATTCCTGTCCGA CAGGCGC TACAGT GCGCCTG TTTGTCTCGTCGGTA yqjA 3462001 - 3462663 + | conserved hypothetical protein; putative inner membrane protein yqjB 3462667 - 3463050 + | conserved hypothetical protein; puttaive outer membrane protein TERM 4668 3463113 - 3463140 + F 81 -10.6 -3.48924 | opp_overlap 3463113 3463114 3463116, overlap 3463114 3463117 ACTGTCTATGATTAA TGAGGCGGTGGT TAAC ACTACCGCTTCG TTGTCTGGACAATCG TERM 4669 3463114 - 3463139 + F 79 -11.9 -2.6914 | opp_overlap 3463114 3463113 3463116, overlap 3463113 3463117 CTGTCTATGATTAAT GAGGCGGTGGT TAAC ACTACCGCTTC GTTGTCTGGACAATC TERM 4670 3463117 - 3463136 + F 77 -10 -3.49618 | opp_overlap 3463116 3463114 3463113, overlap 3463114 3463113 TCTATGATTAATGAG GCGGTGGT TAAC ACTACCGC TTCGTTGTCTGGACA yqjC 3463197 - 3463565 + | hypothetical protein yqjD 3463603 - 3463908 + | hypothetical protein yqjE 3463911 - 3464315 + | conserved hypothetical protein; putative inner membrane protein TERM 4671 3464355 - 3464377 + G 71 -9.2 -3.54741 | opp_overlap 3464365 3464368 3464369 GCAACTGCTTAGCCA GATCCAGC AACAACG GCTGGATC TTTCCGCCAGTCGTC yqjK 3464305 - 3464604 + | hypothetical protein TERM 4672 3464615 - 3464633 + F 90 -12.4 -3.37071 | GTTAACTTCCTCTCT GGCCGGAG AAA TTCCGGCC TTATCCCTCAAATTT TERM 4673 3464770 - 3464759 - f 75 -4.4 -4.89054 | overlap 3464762 TGCACAAAAAAACAA TCAG CAGC CTGA GCGGCGCAGTGGAGA TERM 4674 3465029 - 3465039 + G 82 -3.2 -5.27335 | overlap 3465027 CTGCGGGCTTTACGC TGCT GAC GGCA TTTTTATTTCACAGC yqjF 3464791 - 3465183 + | putative quinol oxidase subunit TERM 4675 3465228 - 3465211 - f 91 -6.9 -5.37345 | opp_overlap 3465211 CTTAACGATAAAAAA CGAGGGG GAAG CTCCTCG TTTTTGCTATTGGAG TERM 4676 3465211 - 3465228 + F 90 -9.1 -4.87626 | opp_overlap 3465211 CTTAACGATAAAAAA CGAGGGG GAAG CTCCTCG TTTTTGCTATTGGAG yqjG 3465253 - 3466239 + | S-transferase TERM 4677 3466245 - 3466262 + F 78 -11.3 -2.8664 | opp_overlap 3466245 CTTCGGTTAAAAAAA GGCACCT TACG AGGTGCC TCTGATAATTAGCTA TERM 4678 3466262 - 3466245 - f 100 -11.3 -5.40072 | opp_overlap 3466245 CTTCGGTTAAAAAAA GGCACCT TACG AGGTGCC TCTGATAATTAGCTA yhaH 3466522 - 3466890 + | conserved hypothetical protein; putative inner membrane protein TERM 4679 3466888 - 3466926 + T 78 -8.5 -4.13767 | gap 1, opp_overlap 3466894, overlap 3466890 3466894 3466898 AAACTGGAACAAGAA TAAT-AATTAAGCACCTT GTAA AAGGTGCTTAATCGATTA TTTTCCGCTAAAAAG TERM 4680 3466890 - 3466923 + T 70 -6.1 -4.19746 | opp_overlap 3466894, overlap 3466888 3466894 3466898 ACTGGAACAAGAATA ATAATTAAGCACCTT GTAA AAGGTGCTTAATCGA TTATTTTCCGCTAAA TERM 4681 3466894 - 3466919 + T 86 -13.5 -2.75865 | opp_overlap 3466894, overlap 3466890 3466888 3466898 GAACAAGAATAATAA TTAAGCACCTT GTAA AAGGTGCTTAA TCGATTATTTTCCGC TERM 4682 3466919 - 3466894 - T 100 -13.5 -4.15654 | opp_overlap 3466894 3466890 3466888 3466898 GAACAAGAATAATAA TTAAGCACCTT GTAA AAGGTGCTTAA TCGATTATTTTCCGC TERM 4683 3466898 - 3466915 + T 72 -9.9 -3.26842 | opp_overlap 3466894, overlap 3466894 3466890 3466888 AAGAATAATAATTAA GCACCTT GTAA AAGGTGC TTAATCGATTATTTT yhaJ 3467820 - 3466924 - | putative DNA-binding transcriptional regulator yhaK 3467925 - 3468626 + | putative pirin-related protein yhaL 3468649 - 3468813 + | hypothetical protein yhaM 3470255 - 3468945 - | hypothetical protein TERM 4684 3469661 - 3469650 - G 75 -7.2 -4.36206 | AGAATCGAGAATAAA GCGG ATCG CCGC AAACGGAACTTCATT TERM 4685 3470278 - 3470264 - R 70 -2.8 -4.90217 | CAAACATATTAAAAA CCTTAA AAT TTCAGG TAAATCAAGAAAATG yhaO 3471551 - 3470283 - | putative transporter TERM 4686 3471864 - 3471847 - R 100 -11.3 -6.00086 | AGATCACAAAAAAAA GGTGCAC ATTT GTGCACC CAAGGATGAAAGCTG TERM 4687 3471893 - 3471876 - R 79 -9.9 -3.84961 | overlap 3471888 CACCCAAGGATGAAA GCTGACA GCAA TGTCAGC CGCAGACCACTTTAA tdcG 3473253 - 3471889 - | L-serine dehydratase 3 TERM 4688 3473318 - 3473284 - R 91 -11.5 -3.72576 | gap 1, overlap 3473298 TTGCCGTTCAGTAAA GTGGAGCGGAACGACC TTGC GACCGTCCCGCTC-AC GAGGCCTTACGCACT tdcF 3473714 - 3473325 - | L-PSP (mRNA) endoribonuclease tdcE 3476022 - 3473728 - | pyruvate formate-lyase 4/2-ketobutyrate formate-lyase tdcD 3477276 - 3476056 - | propionate kinase/acetate kinase C, anaerobic TERM 4689 3477090 - 3477120 + g 70 -11 -2.74144 | overlap 3477090 ATGCACCTTCGTAGC TGTGGTGAGCCAGC GGT GCTGGCTCTCCCCC ATTTACGGATAAGAA TERM 4690 3477090 - 3477121 + g 73 -9.4 -3.57263 | gap 1, overlap 3477090 ATGCACCTTCGTAGC T-GTGGTGAGCCAGC GGT GCTGGCTCTCCCCCA TTTACGGATAAGAAT tdcC 3478621 - 3477290 - | L-threonine/L-serine transporter tdcB 3479632 - 3478643 - | catabolic threonine dehydratase, PLP-dependent TERM 4691 3478695 - 3478716 + g 79 -2.1 -5.28983 | GAAAGATCGATATTG CCGCCGGAA ATAA TACTGACGG TTTTTCTGTTTTGAA TERM 4692 3479279 - 3479260 - G 70 -6.4 -4.21908 | opp_overlap 3479276 TATCACCATGCAAAA CGACTTCT GCGG AGTAGTCG CACGTTGCCGCGACT tdcA 3480663 - 3479725 - | DNA-binding transcriptional activator TERM 4693 3481754 - 3481727 - R 100 -15 -4.25104 | opp_overlap 3481734, overlap 3481734 CCCTGTGCACCAAAA GCAAAAACCCGC CGAA GCGGGTTTTTAC GTAAATCAGGTGAAA TERM 4694 3481747 - 3481734 - R 93 -9.5 -5.1166 | opp_overlap 3481734, overlap 3481727 CACCAAAAGCAAAAA CCCGC CGAA GCGGG TTTTTACGTAAATCA TERM 4695 3481734 - 3481747 + r 91 -9.5 -4.67353 | opp_overlap 3481734 3481727 CACCAAAAGCAAAAA CCCGC CGAA GCGGG TTTTTACGTAAATCA garK 3483397 - 3482171 - | glycerate kinase I TERM 4696 3483339 - 3483350 + g 75 -7.2 -4.34263 | opp_overlap 3483339 CCTGTTACCACATGA CGCC GGAG GGCG TTTCTCTTATTCGGC garR 3484303 - 3483413 - | tartronate semialdehyde reductase TERM 4697 3483973 - 3483987 + g 77 -10 -3.57561 | overlap 3483967 CAATGCCTTTCGCTT TCAGCG CTT CGCTGA TTTCACGGCTTGCCA garL 3485103 - 3484333 - | alpha-dehydro-beta-deoxy-D-glucarate aldolase garP 3486453 - 3485119 - | putative (D)-galactarate transporter TERM 4698 3485753 - 3485767 + g 76 -4.2 -4.9218 | TTGGGTCCGCTTGCT GCCG CACTGCC CGGC TTTTTGTGGTCCATA garD 3486828 - 3488399 + | (D)-galactarate dehydrogenase TERM 4699 3488415 - 3488445 + T 76 -10.6 -3.05384 | overlap 3488417 TAATTCAATTCGTAT TATGCCCGATAG CACACGT TTATCGGGCATA TTGAGTCACAGCGAA agaR 3489275 - 3488451 - | DNA-binding transcriptional dual regulator kbaZ 3489524 - 3490804 + | tagatose 6-phosphate aldolase 1, kbaZ subunit agaV 3490827 - 3491300 + | N-acetylgalactosamine-specific enzyme IIB component of PTS ECS88_3520 3491311 - 3492090 + | putative enzyme IIC component of PTS ECS88_3521 3492074 - 3492958 + | putative hexose/hexosamine family PTS permease IID component ECS88_3522 3492976 - 3493410 + | putative phosphotransferase system enzyme subunit (N-acetyl-galactosamine / galactosamine PTS system enzyme IIA component) agaA 3493386 - 3494540 + | N-acetylglucosamine-6-phosphate deacetylase (GlcNAc 6-P deacetylase) TERM 4700 3494638 - 3494678 + F 71 -9.2 -3.34715 | gap 2, overlap 3494638 3494637 GCGACGCTAATGCGT CTT-ATCCGACC-TACGGTT GGT GACCGTAAGGCCGGATAAAG TATTTACGCCGCATC TERM 4701 3494822 - 3494812 - f 74 -5.4 -4.59212 | AACCAACGAAAGAAA TCAC CAA GTGA AATGAAACGAAAGGC agaS 3494889 - 3496043 + | tagatose-6-phosphate ketose/aldose isomerase kbaY 3496056 - 3496916 + | tagatose 6-phosphate aldolase 1, kbaY subunit TERM 4702 3496944 - 3496973 + F 70 -9.3 -3.21099 | opp_overlap 3496948, overlap 3496945 3496948 TATGATTTATCCCAA TGTACTTCCCGAT TAAT ATCGGGGAGTGCC TTAATGGTAAAGGAG TERM 4703 3496945 - 3496972 + F 81 -12.8 -2.52516 | opp_overlap 3496948, overlap 3496944 3496948 ATGATTTATCCCAAT GTACTTCCCGAT TAAT ATCGGGGAGTGC CTTAATGGTAAAGGA TERM 4704 3496948 - 3496969 + F 74 -10.9 -2.57795 | opp_overlap 3496948, overlap 3496945 3496944 ATTTATCCCAATGTA CTTCCCGAT TAAT ATCGGGGAG TGCCTTAATGGTAAA agaB 3497083 - 3497559 + | N-acetylgalactosamine-specific enzyme IIB component of PTS TERM 4705 3497668 - 3497678 + G 81 -6.8 -4.63592 | TGGGGATTGATTTTT GGCT GGA AGCC TTATTTTTATTCCGC agaC 3497598 - 3498401 + | N-acetylgalactosamine-specific enzyme IIC component of PTS agaD 3498391 - 3499182 + | N-acetylgalactosamine-specific enzyme IID component of PTS TERM 4706 3499220 - 3499184 - g 78 -10.8 -3.55444 | opp_overlap 3499190, overlap 3499185 3499189 3499192 TCGGCATTTTGTAAA TGGAACGAGGCACCGC GTCTG GCGGTGCCTCTTTACT TAAGGAATTTCATCC TERM 4707 3499219 - 3499185 - g 85 -14.3 -2.73124 | opp_overlap 3499190, overlap 3499184 3499189 3499192 CGGCATTTTGTAAAT GGAACGAGGCACCGC GTCTG GCGGTGCCTCTTTAC TTAAGGAATTTCATC TERM 4708 3499215 - 3499189 - g 95 -13.7 -3.27704 | opp_overlap 3499190, overlap 3499185 3499184 3499192 ATTTTGTAAATGGAA CGAGGCACCGC GTCTG GCGGTGCCTCT TTACTTAAGGAATTT TERM 4709 3499190 - 3499214 + G 100 -17.2 -3.90856 | opp_overlap 3499189 3499185 3499184 3499192 TTTTGTAAATGGAAC GAGGCACCGC GTCTG GCGGTGCCTC TTTACTTAAGGAATT TERM 4710 3499212 - 3499192 - g 85 -14 -2.81888 | opp_overlap 3499190, overlap 3499189 3499185 3499184 TTGTAAATGGAACGA GGCACCGC GTCTG GCGGTGCC TCTTTACTTAAGGAA TERM 4711 3499409 - 3499391 - g 82 -3 -5.24531 | opp_overlap 3499395 ATCTGGTAGAAAAAA TCCACCAG CAG CAGGTTGA TGTCAGCCAGCTCAC agaI 3499183 - 3499950 + | galactosamine-6-phosphate isomerase yraL 3500863 - 3500000 - | putative methyltransferase TERM 4712 3500923 - 3500912 - H 89 -3 -5.75945 | ATTGCGTAAAAAAAA TATC ACTG GATA CATTATGGTACCCTC TERM 4713 3501344 - 3501326 - gH 78 -5.3 -4.79352 | opp_overlap 3501333 3501336, overlap 3501306 3501333 CGATTTAGAACAAAA CCAGCAA GCCCG TTACTGG CAGGCAAAAATCGAT TERM 4714 3501882 - 3501859 - gH 72 -8.8 -3.5764 | gap 1 AACCTCAGCCGCAAA CCGTGGATGGC GTT GCCAGCC-CGG CACAAGCTTCGGTTA yraM 3500928 - 3502964 + | hypothetical protein yraN 3502922 - 3503317 + | hypothetical protein yraO 3503337 - 3503927 + | DnaA initiator-associating factor for replication initiation ecfH 3503937 - 3504512 + | conserved hypothetical protein; putative periplasmic or secreted lipoprotein TERM 4715 3504570 - 3504512 - T 77 -10.5 -3.45324 | gap 2, opp_overlap 3504530 3504535 3504546, overlap 3504565 TACGTTTATTAAATA GCAGCCCTTGTAATGCCTGATGCGACGCT TGC AGCGTCTTATCAGGC-CTACAACGA-TGC AAACCGTAGGTCGGA TERM 4716 3504535 - 3504549 + T 76 -10 -3.30124 | opp_overlap 3504512, overlap 3504530 3504546 TGTAATGCCTGATGC GACGCT TGC AGCGTC TTATCAGGCCTACAA TERM 4717 3504577 - 3504612 + T 76 -8.2 -4.1899 | opp_overlap 3504589, overlap 3504546 3504579 3504580 CAACGATGCAAACCG TAGGTCGGATAAGGCG TTTA CGCCGCATCCGACATG TTTTCCCTCAAATCA TERM 4718 3504579 - 3504610 + T 72 -8.6 -3.69483 | opp_overlap 3504589, overlap 3504546 3504577 3504580 ACGATGCAAACCGTA GGTCGGATAAGGCG TTTA CGCCGCATCCGACA TGTTTTCCCTCAAAT TERM 4719 3504580 - 3504609 + T 79 -12.1 -2.81208 | opp_overlap 3504589, overlap 3504546 3504579 3504577 CGATGCAAACCGTAG GTCGGATAAGGCG TTTA CGCCGCATCCGAC ATGTTTTCCCTCAAA yraQ 3505665 - 3504625 - | putative permease yraR 3506373 - 3505738 - | putative nucleoside-diphosphate-sugar epimerase yhbO 3506501 - 3507019 + | putative intracellular protease yhbP 3507442 - 3506999 - | hypothetical protein yhbQ 3507493 - 3507795 + | putative endonuclease yhbS 3508285 - 3507782 - | putative acyltransferase with acyl-CoA N-acyltransferase domain TERM 4720 3507863 - 3507819 - G 95 -15.9 -2.93164 | opp_overlap 3507856, overlap 3507814 3507855 TGATACTCAACCAGA CCAGTTACACCGTTCAGCG CGTCATC CGCTAAACGATGTACCTGG AAGGCACTTTCAGTG yhbT 3508803 - 3508279 - | putative lipid carrier protein TERM 4721 3509418 - 3509440 + G 71 -9 -3.43676 | overlap 3509420 GCCATTTTGACGTTG CCCGCGTGGT GCT GCCGCGCGTG TTGTCGATTCATCAG TERM 4722 3509420 - 3509438 + G 72 -10.2 -3.28814 | overlap 3509418 CATTTTGACGTTGCC CGCGTGGT GCT GCCGCGCG TGTTGTCGATTCATC yhbU 3509012 - 3510007 + | peptidase (collagenase-like) TERM 4723 3510822 - 3510810 - g 70 -5.5 -4.4078 | CCGCGCCAATGAAAA TGGCG CTG CACCA CTGCCGTTGACGGCA yhbV 3510016 - 3510894 + | protease yhbW 3510975 - 3511982 + | putative enzyme mtr 3513344 - 3512100 - | tryptophan transporter of high affinity TERM 4724 3512361 - 3512371 + g 70 -6.8 -4.07568 | opp_overlap 3512368 AGGCGGGGCAAAGGT CAGC AAC GCTG TTTTCAAACGGCCCA TERM 4725 3512450 - 3512434 - G 70 -4.3 -4.48902 | AGATAGTCAAACAAA CCCAGCG TTA CGCCAAG GAACGAACTCGCTAC TERM 4726 3513317 - 3513290 - G 76 -10.6 -3.28712 | gap 1, opp_overlap 3513289 3513309 TGGTGCCGCCGATAA TCACCA-CGCCGC CAA GCAGCGACGGTGA CGTTTGGGTGGTGGT TERM 4727 3513454 - 3513432 - R 100 -10.6 -5.9667 | opp_overlap 3513430 3513428 3513426 3513432 AAAAACAGAAAAAAA GCCCCGAT GGTTAAA ATCGGGGC TGTATATATTATTTT TERM 4728 3513432 - 3513454 + r 78 -10.6 -3.17888 | opp_overlap 3513432, overlap 3513430 3513428 3513426 AAAAACAGAAAAAAA GCCCCGAT GGTTAAA ATCGGGGC TGTATATATTATTTT deaD 3515387 - 3513498 - | ATP-dependent RNA helicase TERM 4729 3515532 - 3515507 - R 72 -7.5 -4.04023 | overlap 3515508 ATTAACGAACAACAA CGCCCTCACCC GTTA AGGTGATGGCA ATCAAAAAAGATTAC nlpI 3516451 - 3515567 - | lipoprotein precursor TERM 4730 3516548 - 3516527 - R 100 -15.1 -4.07568 | CCTGCCCGGTTAAAA GCCCCCCGC CGCA GCGGAGGGC AAATGGCAACCTTAC pnp 3518764 - 3516560 - | polynucleotide phosphorylase/polyadenylase TERM 4731 3518903 - 3518921 + r 77 -7.3 -4.38712 | opp_overlap 3518904, overlap 3518904 CGTCAGCTTGAAAAA AGGGGCC ACTCA GGCCCCC TTTTCTGAAACTCGC TERM 4732 3518920 - 3518904 - R 100 -10.8 -5.03314 | opp_overlap 3518903 3518904 GTCAGCTTGAAAAAA GGGGCC ACTCA GGCCCC CTTTTCTGAAACTCG TERM 4733 3518904 - 3518920 + r 78 -10.8 -3.22906 | opp_overlap 3518904, overlap 3518903 GTCAGCTTGAAAAAA GGGGCC ACTCA GGCCCC CTTTTCTGAAACTCG rpsO 3519211 - 3518942 - | 30S ribosomal subunit protein S15 TERM 4734 3519046 - 3519067 + g 85 -2.9 -5.34555 | opp_overlap 3519048, overlap 3519048 3519049 AAACCATGCGCAGCA GACCACGAC GGCT GTGGTGATC TTTTTTGTGCTCTGC truB 3520304 - 3519360 - | tRNA pseudouridine synthase rbfA 3520705 - 3520304 - | 30s ribosome binding factor TERM 4735 3520643 - 3520654 + g 75 -4.4 -4.82855 | overlap 3520635 TTCACGCTGCAGGAT GAGA GCGA TCTC TTTTTGCATTTCCTG TERM 4736 3520728 - 3520742 + r 100 -11.4 -4.68506 | opp_overlap 3520728 TCTCCTGACAAAAAA GGGGCT GTT AGCCCC TTTTTAAAATTAATT TERM 4737 3520742 - 3520728 - R 100 -11.4 -5.24129 | opp_overlap 3520728 TCTCCTGACAAAAAA GGGGCT GTT AGCCCC TTTTTAAAATTAATT TERM 4738 3520856 - 3520817 - R 73 -10 -3.09516 | overlap 3520795 CGTCGCATCAGGCAA TCCATGCAGGATGCGACA TAAA CGCCTTATCCCGCATGGA ACCCTAAAAACCTTA infB 3523541 - 3520869 - | translation initiation factor IF-2 nusA 3525053 - 3523566 - | transcription termination/antitermination L factor TERM 4739 3523707 - 3523697 - G 74 -8.2 -3.89346 | opp_overlap 3523702, overlap 3523698 CTTCCAGCGTACAAA CGCC ACG GGCG GCCAGTTTGAATGCC TERM 4740 3523800 - 3523818 + g 82 -7.4 -4.57569 | TTCTTCCTGGGCCTG TGCAATGG TGG CCAGTGCA TTTTTAGCACGCTCG yhbC 3525533 - 3525081 - | hypothetical protein TERM 4741 3525570 - 3525558 - H 100 -6.9 -5.80248 | opp_overlap 3525557 CAAGACATAAAAAAA GGGCC TAA AGCCC AGTTATTCTGTAGTC TERM 4742 3525598 - 3525615 + H 70 -6.9 -4.0641 | opp_overlap 3525599, overlap 3525599 GTCAGATAACAAAAA ACCCCGA TAAA TCGGGGC TTTATATAACTGAAC TERM 4743 3525599 - 3525614 + H 73 -10.4 -3.03525 | opp_overlap 3525599, overlap 3525598 TCAGATAACAAAAAA CCCCGA TAAA TCGGGG CTTTATATAACTGAA TERM 4744 3525614 - 3525599 - H 100 -10.4 -5.60689 | opp_overlap 3525599 3525598 TCAGATAACAAAAAA CCCCGA TAAA TCGGGG CTTTATATAACTGAA argG 3526164 - 3527507 + | argininosuccinate synthetase TERM 4745 3527519 - 3527539 + T 70 -8.9 -3.25356 | opp_overlap 3527519, overlap 3527533 GTAATTCGACATCAA CCCTGCCCT TCA GGGGTGGGG TTACCTTGCTTATCC yhbX 3529140 - 3527515 - | putative hydrolase, inner membrane TERM 4746 3529026 - 3529015 - G 83 -5.8 -4.93365 | GGTCAGAACGAAAAA CAGC AATC GCTG AACCATATGTGCTCC TERM 4747 3529567 - 3529582 + r 79 -9 -3.95621 | opp_overlap 3529567 ACCAAAACGAAAAAA GACGCT TTTC AGCGTC TTTCTGGAATTTGGT TERM 4748 3529582 - 3529567 - R 100 -9 -5.48054 | opp_overlap 3529567 ACCAAAACGAAAAAA GACGCT TTTC AGCGTC TTTCTGGAATTTGGT TERM 4749 3529719 - 3529741 + r 79 -7.7 -4.32607 | overlap 3529737 GATATCGCTGGTCGG CTTAGCCGG AGCAG CTGGCTGAG TTTGTTCGGTTTTCG secG 3530027 - 3529695 - | preprotein translocase membrane subunit TERM 4750 3530207 - 3530185 - R 81 -3.5 -5.41746 | gap 1 AACTGCGGAAAAAAA CAGCAAA-AC CGAT GTGTTCGCTG AGAAAAAAGGCGACA TERM 4751 3530228 - 3530216 - R 100 -9.1 -5.24129 | opp_overlap 3530215 3530216, overlap 3530218 TTCGCTGAGAAAAAA GGCGA CAA TCGCC GCCTTTTTAGCCAGC TERM 4752 3530216 - 3530231 + r 76 -6 -4.56775 | opp_overlap 3530216 3530218, overlap 3530215 TTCGCTGAGAAAAAA GGCGAC AATC GCCGCC TTTTTAGCCAGCCAT glmM 3531592 - 3530255 - | phosphoglucosamine mutase folP 3532433 - 3531585 - | 7,8-dihydropteroate synthase TERM 4753 3532039 - 3532028 - G 70 -7.2 -4.0942 | opp_overlap 3532028 TATGCATCAGACAAA CCGG TAAA CCGG TTTCTGCAGCCGCCT TERM 4754 3532487 - 3532468 - R 100 -12.8 -5.56673 | opp_overlap 3532468 ATTGATAAGAAAAAA CCCCGGAG CACG CCCCGGGG TTTTCGGTACAAATA TERM 4755 3532468 - 3532487 + r 88 -10.6 -4.18494 | opp_overlap 3532468 ATTGATAAGAAAAAA CCCCGGAG CACG CCCCGGGG TTTTCGGTACAAATA ftsH 3534457 - 3532523 - | protease, ATP-dependent zinc-metallo rrmJ 3535186 - 3534557 - | 23S rRNA methyltransferase TERM 4756 3535353 - 3535336 - g 90 -4.9 -5.34309 | gap 1, overlap 3535341 AGTACTAAACAAAAA CAGCACCT GAA AGGT-CTG GCACATCCGCTCAAG yhbY 3535312 - 3535605 + | putative RNA-binding protein TERM 4757 3535691 - 3535718 + T 93 -13.6 -3.25946 | gap 1, opp_overlap 3535698, overlap 3535698 CACGCTCTGTTCGTT GATAAAAGGCCGC ATA GCGGCCTTTT-TC CTTTCTTTACAATAC TERM 4758 3535712 - 3535698 - T 100 -12.8 -4.36914 | opp_overlap 3535698 3535691 TGTTCGTTGATAAAA GGCCGC ATA GCGGCC TTTTTCCTTTCTTTA TERM 4759 3535698 - 3535712 + T 100 -12.8 -5.13137 | opp_overlap 3535698, overlap 3535691 TGTTCGTTGATAAAA GGCCGC ATA GCGGCC TTTTTCCTTTCTTTA greA 3536237 - 3535761 - | transcription elongation factor TERM 4760 3535799 - 3535810 + g 72 -7.2 -4.25104 | CTTCAAATTCTACTT CGCC GCCC GGCG TTTTGATGACCACAA TERM 4761 3536370 - 3536339 - H 100 -5.2 -5.68023 | gap 1, overlap 3536341 CCAGAAGCAAAAAAA TA-CCGACCCGGG TACAAGT CCCAGGTCAGCTA CAATTCACATTTTGA TERM 4762 3536367 - 3536341 - H 89 -9.4 -4.46828 | overlap 3536339 AGAAGCAAAAAAATA CCGACCCGGG TACAAGT CCCAGGTCAG CTACAATTCACATTT TERM 4763 3537512 - 3537469 - g 100 -16.8 -3.02043 | gap 1 AATGTGCCTGGAACA TGGCGG-GCAGGATCGGACGC CGT GCGTCAGATCCTGCGCCAGCA AGCCGGTGTCGATAT dacB 3536485 - 3537918 + | D-alanyl-D-alanine carboxypeptidase TERM 4764 3537925 - 3537955 + T 85 -13.3 -2.74019 | opp_overlap 3537931, overlap 3537931 AATAATTAGCCTAAA GAGAAACCCCGGC ACATG GCCGGGGTTTTGC TGATTAACGCTTGTA TERM 4765 3537949 - 3537931 - T 100 -13.1 -4.33928 | opp_overlap 3537925 3537931 TAGCCTAAAGAGAAA CCCCGGC ACATG GCCGGGG TTTTGCTGATTAACG TERM 4766 3537931 - 3537949 + T 100 -13.1 -4.3534 | opp_overlap 3537931, overlap 3537925 TAGCCTAAAGAGAAA CCCCGGC ACATG GCCGGGG TTTTGCTGATTAACG obgE 3539131 - 3537959 - | GTPase involved in cell partioning and DNA repair yhbE 3540112 - 3539147 - | conserved hypothetical protein; putative inner membrane protein TERM 4767 3539379 - 3539342 - G 76 -9.1 -3.74198 | gap 1, overlap 3539335 AAAAAACAGCGTAAA CAGTG-GGGTGAGCGTGA TGA TCGCGCTCACCTGCGCTG CCTGCCAGCGAGCCA TERM 4768 3540189 - 3540210 + r 100 -15.9 -3.794 | opp_overlap 3540189 TATCGAATGTAAAAA GCCCCGCAA CGTG TTGCGGGGC TTTCATCCGTTACCG TERM 4769 3540210 - 3540189 - R 100 -15.9 -4.75174 | opp_overlap 3540189 TATCGAATGTAAAAA GCCCCGCAA CGTG TTGCGGGGC TTTCATCCGTTACCG rpmA 3540496 - 3540239 - | 50S ribosomal subunit protein L27 rplU 3540828 - 3540517 - | 50S ribosomal subunit protein L21 TERM 4770 3541774 - 3541764 - g 81 -6.8 -4.67755 | ACAGTTAGGTAAAAA CGTC GGC GACG ATCTGAACGAAGGTA ispB 3541087 - 3542058 + | octaprenyl diphosphate synthase TERM 4771 3542072 - 3542090 + F 100 -16 -2.7386 | AATCCCCTCCCCTCA TCCCGCGC AGT GCGCGGGA TGATTCCAGTAAATT sfsB 3542291 - 3542569 + | DNA-binding transcriptional activator of maltose metabolism murA 3543876 - 3542617 - | UDP-N-acetylglucosamine 1-carboxyvinyltransferase TERM 4772 3543374 - 3543396 + g 86 -10.6 -3.92075 | opp_overlap 3543372 GCAGCACACATGATG GTCACCGTTG CGC CAACGCTGAC TTTATCCATCACGAT yrbA 3544185 - 3543931 - | putative DNA-binding transcriptional regulator TERM 4773 3544027 - 3544050 + g 76 -3.8 -5.00884 | CGCAATATATTCCAT CAGCGGGC CATAGACC GTCTGCTG TTTTTTAACCCGACT TERM 4774 3544285 - 3544261 - R 86 -7.2 -5.05712 | gap 1, overlap 3544280 ATAAATAAGCAAAAA GCCTCG-CTGA TAAA TCAGACAAGGC TCGACTTGCAGGCAG yrbB 3544638 - 3544345 - | hypothetical protein yrbC 3545273 - 3544638 - | toluene transporter subunit: membrane component of ABC superfamily yrbD 3545843 - 3545292 - | toluene transporter subunit: membrane component of ABC superfamily TERM 4775 3545797 - 3545778 - G 72 -5.6 -4.46112 | CTTCAGGCAAACAAA CAGCGCCG CAAG CAGTGCTG CTAATAAAAAGATAC yrbE 3546630 - 3545848 - | toluene transporter subunit: membrane component of ABC superfamily yrbF 3547447 - 3546638 - | toluene transporter subunit: ATP-binding component of ABC superfamily TERM 4776 3548495 - 3548506 + G 70 -4.4 -4.47888 | ACTACAGCGTGATGT TGCT GGTG AGCA TTATTTTTGCGTTGC yrbG 3547657 - 3548634 + | putative calcium/sodium:proton antiporter TERM 4777 3549564 - 3549582 + G 84 -11 -3.79138 | ATATCACCTCCGTGA TGGTTGCC GAT GGCGACCA TTTACTCGGTGTGTT kdsD 3548648 - 3549634 + | D-arabinose 5-phosphate isomerase TERM 4778 3549981 - 3549961 - g 82 -7.5 -4.46112 | opp_overlap 3549965, overlap 3549963 GGGCAGTCAAACAAA CTGATCGCC TTT AGCGATCTG CTGGAAAAACTGGCG kdsC 3549655 - 3550221 + | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase TERM 4779 3550310 - 3550299 - gf 70 -3.6 -4.59511 | AATATGGCCGAAAAA GACG ATAC CGCC CAGGTGGTCGTCAAC yrbK 3550218 - 3550793 + | hypothetical protein TERM 4780 3551301 - 3551287 - gf 71 -3.4 -4.80417 | overlap 3551288 GACAAAAACAATAAA GGCCAG ACC CCGGCA CAGAAGAAGGGTAAT lptA 3550762 - 3551319 + | putative lipopolysaccharide transport protein A: periplasmic-binding component of ABC superfamily lptB 3551326 - 3552051 + | putative lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily rpoN 3552099 - 3553532 + | RNA polymerase, sigma 54 (sigma N) factor yhbH 3553555 - 3553842 + | ribosome-associated, sigma 54 modulation protein TERM 4781 3553870 - 3553896 + F 100 -13 -3.93236 | overlap 3553871 TTAGCATGTGCATGG CGGCCTGTTGTG CGG CACAACGGGCCA TTTGTACGGTTAATG TERM 4782 3553871 - 3553895 + F 100 -16.5 -2.95459 | overlap 3553870 TAGCATGTGCATGGC GGCCTGTTGTG CGG CACAACGGGCC ATTTGTACGGTTAAT ptsN 3553960 - 3554451 + | sugar-specific enzyme IIA component of PTS TERM 4783 3554505 - 3554491 - f 76 -8.6 -3.96148 | CGTTGTGAGGAGAAA CAGTAC ATG GTACTG ATGATCGTCAGCGGA yhbJ 3554497 - 3555351 + | conserved hypothetical protein; putative nucleoside triphosphate hydrolase domain TERM 4784 3555405 - 3555380 - g 88 -11.1 -4.13654 | overlap 3555383 TGTTGAAATCACAAA CAAGCTGGGCA TGCA TGCCCGGCCTG CAATGAAGCTGTTTG TERM 4785 3555402 - 3555383 - g 82 -9.2 -4.1851 | overlap 3555380 TGAAATCACAAACAA GCTGGGCA TGCA TGCCCGGC CTGCAATGAAGCTGT npr 3555348 - 3555620 + | phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr) TERM 4786 3555608 - 3555629 + F 71 -10.3 -2.79671 | overlap 3555607 CTTTAACTCTGGTTT TGATGAAGA TTAA TCTTCATCA CTTTGACATTCAAAT yrbL 3555834 - 3556466 + | hypothetical protein mtgA 3557191 - 3556463 - | biosynthetic peptidoglycan transglycosylase TERM 4787 3556564 - 3556525 - G 77 -8.4 -4.08394 | ACATCTGCCGTAAAA TCCACGCCTGACGGCTAC GCAC GTAGCCCGATGGCGCGGA GACTTTGAAACGAAG elbB 3557841 - 3557188 - | isoprenoid biosynthesis protein with amidotransferase-like domain TERM 4788 3558051 - 3558073 + r 83 -5.4 -5.19261 | overlap 3558052 3558054 TGGCGCAGTATTCGC GCACCCCGGT CTA GCCGGGGTCA TTTTTTAGTGGCTTT TERM 4789 3558052 - 3558072 + r 75 -8.9 -3.6993 | overlap 3558051 3558054 GGCGCAGTATTCGCG CACCCCGGT CTA GCCGGGGTC ATTTTTTAGTGGCTT TERM 4790 3558054 - 3558070 + r 83 -11.5 -3.41701 | overlap 3558052 3558051 CGCAGTATTCGCGCA CCCCGGT CTA GCCGGGG TCATTTTTTAGTGGC arcB 3560407 - 3558071 - | hybrid sensory histidine kinase in two-component regulatory system with ArcA TERM 4791 3558468 - 3558484 + g 70 -6.5 -4.2704 | GTACTCTCCTCATCA TCCTGGG TAT CCCAGAA TTTCTTGATCATCGC TERM 4792 3559804 - 3559828 + g 74 -2.8 -4.92239 | CCGGTGAGTAAACAT CAGCAGGTTT CAGGT GAACCAGTTG TTTTTCGCTTTTTCC yhcC 3561432 - 3560503 - | putative Fe-S oxidoreductase TERM 4793 3561909 - 3561929 + H 71 -8.3 -3.54 | overlap 3561908 3561910 3561912 CGCTGGAAGCTTTCT GGATGAGCA GCC TGCTCATCA TATTTATGCAGTAAT TERM 4794 3561910 - 3561928 + H 79 -11.8 -2.71918 | overlap 3561909 3561908 3561912 GCTGGAAGCTTTCTG GATGAGCA GCC TGCTCATC ATATTTATGCAGTAA TERM 4795 3563284 - 3563271 - g 72 -5.2 -4.58283 | GAAGTGGTCGAAAAA GGCC GCGTAG GGCC AGGCGAACTGATGGT TERM 4796 3565745 - 3565718 - g 70 -6.2 -4.1899 | opp_overlap 3565740, overlap 3565721 CTACTGCACCGAAAA CAACCCGCCGTT TGAT AACGGCCTGCTG AACGCGCAGTTGCTG gltB 3562014 - 3566567 + | glutamate synthase, large subunit TERM 4797 3567040 - 3567024 - g 74 -2.1 -5.07107 | opp_overlap 3567034, overlap 3567026 CAAACCGGTAAAAAA GTGGCGA TTA TCGGCGC TGGCCCGGCGGGTCT TERM 4798 3567110 - 3567093 - g 70 -6.9 -4.11484 | overlap 3567094 CGCAACGGCGTAAAA GCGGTCG TCTT CGACCGT CACCCGGAAATTGGC TERM 4799 3567354 - 3567332 - g 74 -7.6 -4.07568 | overlap 3567338 CGGCGGGCTGGAAAA CGAAGACGCC GAT GGCGTGTACG CAGCGCTGCCGTTCC gltD 3566580 - 3567998 + | glutamate synthase, 4Fe-4S protein, small subunit TERM 4800 3568041 - 3568011 - T 100 -20 -3.69283 | opp_overlap 3568015, overlap 3568015 TAAGCGAGGTAACAA TAAATTCGCCAGAC AGT GTCTGGCGAATTTA TAAAACGAGCGATCC TERM 4801 3568037 - 3568015 - T 100 -16.4 -4.46854 | opp_overlap 3568015, overlap 3568011 CGAGGTAACAATAAA TTCGCCAGAC AGT GTCTGGCGAA TTTATAAAACGAGCG TERM 4802 3568015 - 3568037 + T 100 -16.4 -3.85698 | opp_overlap 3568011 3568015 CGAGGTAACAATAAA TTCGCCAGAC AGT GTCTGGCGAA TTTATAAAACGAGCG yhcH 3568530 - 3568066 - | hypothetical protein nanK 3569402 - 3568527 - | putative N-acetylmannosamine kinase nanE 3570088 - 3569399 - | putative N-acetylmannosamine-6-P epimerase TERM 4803 3570128 - 3570109 - R 74 -10.7 -2.78679 | overlap 3570108 TTCCCTTAGCGAAAG GCCCGGT ACAGAG ACCGGGC AACAGGATTAACTTT nanT 3571626 - 3570136 - | sialic acid transporter TERM 4804 3571639 - 3571660 + r 100 -12.3 -3.8377 | gap 1 CATTGTGAGTCTCCC GCG-GTGGGC GAT GCCCACACGC TTTGGTATGAAAATT TERM 4805 3571737 - 3571688 - R 75 -10.9 -2.89683 | gap 1, opp_overlap 3571718 3571720 ATTGTAGGGTACAGA TGCGTTTATTTCCCCTCACCCG GTAGGGG CGAGCGAGGGGAAAC-AACTCA CCCGCGCTCTTGCAT nanA 3572628 - 3571735 - | N-acetylneuraminate lyase nanR 3573541 - 3572750 - | DNA-binding transcriptional dual regulator TERM 4806 3573619 - 3573645 + r 72 -9.5 -3.24146 | opp_overlap 3573624, overlap 3573624 AAAGATGACAGATAG CAAAACAGGCC ACATG GGCCTGTTTTC ATTTTACTTCACAAC TERM 4807 3573624 - 3573640 + r 91 -9.4 -4.72729 | opp_overlap 3573624, overlap 3573619 TGACAGATAGCAAAA CAGGCC ACATG GGCCTG TTTTCATTTTACTTC TERM 4808 3573640 - 3573624 - R 86 -9.4 -4.41353 | opp_overlap 3573624 3573619 TGACAGATAGCAAAA CAGGCC ACATG GGCCTG TTTTCATTTTACTTC sspB 3574146 - 3573649 - | ClpXP protease specificity-enhancing factor sspA 3574790 - 3574152 - | stringent starvation protein A TERM 4809 3575133 - 3575146 + r 93 -9.5 -5.03145 | opp_overlap 3575133 TTAGCCATAAAAAAA CCCGC CGAA GCGGG TTTTTTCGCAAATTG TERM 4810 3575146 - 3575133 - R 100 -9.5 -5.64274 | opp_overlap 3575133 TTAGCCATAAAAAAA CCCGC CGAA GCGGG TTTTTTCGCAAATTG rpsI 3575577 - 3575185 - | 30S ribosomal subunit protein S9 rplM 3576021 - 3575593 - | 50S ribosomal subunit protein L13 TERM 4811 3575883 - 3575898 + g 70 -6.8 -4.05446 | CACCGGTATCTACGT GCGGAG TGTA TTCCGC TTTGTGCTTACCGCG TERM 4812 3576200 - 3576218 + r 91 -8.8 -5.06735 | opp_overlap 3576198 GATTATAGAGAAGTC GGGGTCAA AGA TCGACCCC TTTTTGTGATTTGTG yhcM 3577368 - 3576241 - | conserved hypothetical protein; putative nucleoside triphosphate hydrolase domain TERM 4813 3577205 - 3577243 + g 76 -12.4 -2.5007 | overlap 3577204 3577207 CACAGCTTACCGACC CGCGCCATTAGCCCAC TCGTCCT GGGGGCTGGTGGCGTG CTATTGATGAGTTCC TERM 4814 3577207 - 3577241 + g 73 -11.4 -2.78266 | overlap 3577205 3577204 CAGCTTACCGACCCG CGCCATTAGCCCAC TCGTCCT GGGGGCTGGTGGCG TGCTATTGATGAGTT yhcB 3577562 - 3577960 + | putative cytochrome d ubiquinol oxidase subunit III TERM 4815 3577971 - 3577989 + F 82 -12.4 -2.83517 | ACTAATTTATTTTTC GGGCGCAG CCA TTGCGCCC TCCTCTTCTCTCCCT degQ 3578114 - 3579481 + | serine endoprotease, periplasmic TERM 4816 3579491 - 3579520 + F 76 -10.7 -3.11192 | opp_overlap 3579491 CGTTAATGTCGTAAA CCGGGCATCAGGC TGAC GTGTGATGTCCGG TTAACTCGTGGTATG TERM 4817 3580338 - 3580311 - g 78 -10.6 -3.42124 | gap 1, opp_overlap 3580325, overlap 3580305 CAAAATTATGGATAA GCTGATC-CGCGA TGG TCGCGTGATCCGC GGCTACATTGGCATT degS 3579571 - 3580638 + | serine endoprotease, periplasmic TERM 4818 3580684 - 3580655 - T 100 -9.4 -5.44119 | opp_overlap 3580661, overlap 3580661 GTCAGCGTAAAAAAA CAAAAACCGGAG TCTGTG CTCCGGTTTTTT ATTATCCGCTAATCA TERM 4819 3580678 - 3580661 - T 100 -8.4 -5.86609 | opp_overlap 3580661, overlap 3580655 GTAAAAAAACAAAAA CCGGAG TCTGTG CTCCGG TTTTTTATTATCCGC TERM 4820 3580661 - 3580678 + T 100 -9.1 -5.55769 | opp_overlap 3580661 3580655 GTAAAAAAACAAAAA CCGGAGT CTGT GCTCCGG TTTTTTATTATCCGC TERM 4821 3580720 - 3580732 + T 71 -9.1 -3.41738 | opp_overlap 3580712, overlap 3580719 TTATTAACGAACTCT TCGCC CAG GGCGA TATCTTTCTTCAGCG mdh 3581639 - 3580701 - | malate dehydrogenase, NAD(P)-binding argR 3582074 - 3582544 + | DNA-binding transcriptional dual regulator, L-arginine-binding TERM 4822 3582547 - 3582577 + F 75 -9.6 -3.4243 | overlap 3582546 CCAGGAGCTTTAATC TCTGCCCCGTCGCT TCT GGCGGCGGGGAAAA TGTTGCTTTTGCCTA TERM 4823 3582694 - 3582684 - f 77 -3.2 -5.25893 | ACATATAGTAAAAAA GCAC ATT ATGC AAAATTCATTATCTA yhcN 3582908 - 3583171 + | hypothetical protein TERM 4824 3583199 - 3583215 + T 100 -15.1 -5.44721 | opp_overlap 3583197 TTGTCCGACGATATT GCCCCCG GTT CGGGGGC TTTTTTTGCGCTAAT yhcO 3583498 - 3583226 - | putative barnase inhibitor TERM 4825 3583582 - 3583564 - R 100 -11.7 -5.17353 | opp_overlap 3583564 ATAGCCATGAAAAAA CCGACGC TTCAG GCGTCGG TTTTGACTTAACTAT TERM 4826 3583564 - 3583582 + r 100 -12.4 -4.29176 | opp_overlap 3583564 ATAGCCATGAAAAAA CCGACGCT TCA GGCGTCGG TTTTGACTTAACTAT aaeB 3585557 - 3583590 - | p-hydroxybenzoic acid efflux system component aaeA 3586495 - 3585563 - | p-hydroxybenzoic acid efflux system component TERM 4827 3586268 - 3586282 + g 76 -4.2 -5.0133 | CGGCTGGTCGATGGT GAACAG TAC CTGTCC TTTTTTCACCAGCTG aaeX 3586706 - 3586503 - | membrane protein of efflux system aaeR 3586889 - 3587818 + | DNA-binding transcriptional regulator, efflux system tldD 3589391 - 3587946 - | putative peptidase TERM 4828 3588801 - 3588772 - G 74 -6.3 -4.50661 | gap 1, opp_overlap 3588788 AACTCATAACCAAAA CGACCGCCGCCGCC ACT GGC-ACCGCGTTCG CGTTTGCCATCTTCT TERM 4829 3588941 - 3588963 + g 72 -9.8 -3.28712 | TCACTTCTTGTACGC GCTTGTCCGC TTC GCGGGCAACC TTATCGACGCGACGC TERM 4830 3589099 - 3589117 + g 76 -8.1 -4.15044 | overlap 3589105 CTATCACGGACGATG GTGCGCG CCGCT TGCGCAC TTTGTTCCAGCGCCA TERM 4831 3589434 - 3589473 + r 70 -9.8 -2.85459 | overlap 3589433 3589461 GTAGAGGATTTTTTA CGGCTGCCGGATGCGGCG TGAA CGCCCTATCCGGCCTACG GTTATGTTCTGGCTC yhdP 3593347 - 3589547 - | conserved hypothetical protein; putative membrane protein, putative transporter TERM 4832 3590165 - 3590176 + g 74 -5.8 -4.54727 | opp_overlap 3590146 GGCGGCATCAATTTT CTGC CCGC GCAG TTTTCCTTTCAGCGA TERM 4833 3590504 - 3590516 + g 71 -9.1 -3.51411 | overlap 3590500 TGCGTTATTACGCAT CGCCA GCG TGGCG TTGATTTCACGCCCT rng 3594884 - 3593415 - | ribonuclease G TERM 4834 3594237 - 3594281 + g 74 -2 -5.05782 | gap 2, opp_overlap 3594223 3594220 3594232 3594230, overlap 3594234 3594274 ACGCAGAACACGCTG CGCCAGC-G-CCAGTTCTCCGT ACA GCTGATAACGGGTCTGCGGGCG TTTTTTACGCTCCAT yhdE 3595467 - 3594874 - | putative septum formation protein mreD 3595964 - 3595476 - | cell wall structural complex MreBCD transmembrane component MreD ECS88_3625 3596079 - 3595948 - | hypothetical protein mreC 3597067 - 3595964 - | cell wall structural complex MreBCD transmembrane component MreC TERM 4835 3596744 - 3596773 + gr 76 -7.7 -4.27117 | opp_overlap 3596746, overlap 3596752 ACGCAGCGGGGAACC CAGCAGCTCGCGC AGAC GCGCGTTCTCCTG TTTGTATTGTCCAAG TERM 4836 3596752 - 3596765 + gr 77 -9.5 -3.59627 | opp_overlap 3596746, overlap 3596744 GGGAACCCAGCAGCT CGCGC AGAC GCGCG TTCTCCTGTTTGTAT mreB 3598176 - 3597133 - | cell wall structural complex MreBCD, actin-like component MreB TERM 4837 3597928 - 3597945 + g 74 -8.3 -3.90291 | opp_overlap 3597928, overlap 3597930 TTCAGTCACGAAGAA GTCGGCG ATAA CGCCGTC TTTCATTGGGCGAAT TERM 4838 3597945 - 3597928 - G 72 -8.3 -3.73647 | opp_overlap 3597928 3597930 TTCAGTCACGAAGAA GTCGGCG ATAA CGCCGTC TTTCATTGGGCGAAT TERM 4839 3597930 - 3597943 + g 71 -9.5 -3.54146 | opp_overlap 3597928, overlap 3597928 CAGTCACGAAGAAGT CGGCG ATAA CGCCG TCTTTCATTGGGCGA ECS88_3628 3598284 - 3598472 + | hypothetical protein csrD 3600421 - 3598481 - | inner membrane associated factor modulating specific RNAseE dependent RNA degradation pathways TERM 4840 3599199 - 3599182 - G 72 -8.3 -3.85698 | CCGGTTTTTGATAAA GGCGCGG GCCG CCGCGAC TGAGCATTTGCTCGA TERM 4841 3601282 - 3601334 + G 70 -5.7 -4.33819 | gap 3, overlap 3601275 ATTACGGCGGCTGCG TGGCG-GCCTGTGGTCTGGC-GGGTG GTTT TACTCTGCCA-ACCACGGTCATGCCA TTTATTCTGCGTAAT yhdH 3600573 - 3601547 + | putative oxidoreductase, Zn-dependent and NAD(P)-binding accB 3602525 - 3602995 + | acetyl CoA carboxylase, BCCP subunit TERM 4842 3603395 - 3603381 - g 74 -2.1 -5.14563 | gap 1 GCGGCGATGAAAAAA GC-AGG CGTT CCTTGC GTACCGGGTTCTGAC accC 3603006 - 3604355 + | acetyl-CoA carboxylase, biotin carboxylase subunit TERM 4843 3604404 - 3604430 + T 93 -9.4 -5.10208 | opp_overlap 3604404, overlap 3604426 AAAGAACGTAATCAA CGCCGGGC CTGTTAACGCT GCCCGGCG TTTTTATTGCCGTTA TERM 4844 3604430 - 3604404 - T 75 -9.4 -3.43651 | opp_overlap 3604404 3604426 AAAGAACGTAATCAA CGCCGGGC CTGTTAACGCT GCCCGGCG TTTTTATTGCCGTTA ECS88_3633 3605493 - 3604447 - | hypothetical protein ECS88_3634 3606452 - 3605490 - | putative carbohydrate kinase ECS88_3635 3607463 - 3606474 - | putative sugar transporter subunit: membrane component of ABC superfamily TERM 4845 3607163 - 3607152 - G 71 -2.2 -4.90302 | GACCAATAAAACAAA TGGA ATTC CCCA TGAAGCCCCAAGCGC ECS88_3636 3608993 - 3607464 - | putative sugar transporter subunit: ATP-binding component of ABC superfamily TERM 4846 3608121 - 3608103 - G 93 -8.8 -5.06451 | CACCAGGCCAAAAAA TCCGAGGA CTT CCCCCGGA CGCACAGCGAAACTG ECS88_3637 3609920 - 3609024 - | putative ABC-type sugar transport system, periplasmic component TERM 4847 3609918 - 3609929 + g 71 -3 -4.85599 | opp_overlap 3609918 AATATTTTTCATAAA CAAT CCTC ATTG TTTTTGTAGGGTACA ECS88_3638 3610804 - 3609950 - | Putative fructose/tagatose biphosphate aldolase TERM 4848 3610999 - 3611010 + H 70 -3 -4.89966 | opp_overlap 3610999 AACCCTGCATAAATA TGAA TATA TTCA TTTATTTTTCAATGT ECS88_3639 3611145 - 3611975 + | putative DEOR-type transcriptional regulator yhdT 3613035 - 3613277 + | conserved hypothetical protein; putative inner membrane protein TERM 4849 3613784 - 3613796 + G 70 -10.5 -2.71791 | overlap 3613774 3613783 GCATTGCGTTGTATA CCGCC TTT GGCGG CTTTCGCGCCAGCGT panF 3613267 - 3614718 + | pantothenate:sodium symporter TERM 4850 3614793 - 3614821 + G 77 -8.9 -4.11216 | opp_overlap 3614802, overlap 3614794 GATCTTAGCGATGCG CTGATGGAAGCGG GTG CCGTTTCTATCAC TTTTCAGGATACCCA TERM 4851 3614794 - 3614820 + G 79 -12.4 -3.06515 | opp_overlap 3614802, overlap 3614793 ATCTTAGCGATGCGC TGATGGAAGCGG GTG CCGTTTCTATCA CTTTTCAGGATACCC prmA 3614730 - 3615611 + | methylase for 50S ribosomal subunit protein L11 TERM 4852 3615705 - 3615665 - f 70 -5.5 -4.40358 | AGCGATGTCACAAAA GGCACGTTAATTTGC CGATTATTTAC GCAAATTTGCGTGCC AAAATTTTCATTCAT TERM 4853 3615745 - 3615730 - f 81 -3.3 -5.38958 | opp_overlap 3615730 3615739, overlap 3615741 ATTCATAAAGAAAAA TTGAG AACTTA CTCAA ATTTCTTTGAGTGTA TERM 4854 3615905 - 3615891 - f 74 -4.2 -5.00884 | overlap 3615892 ATCTCGTGCAAAAAA TGCGTA ATA TACGCC GCCTTGCAGTCACAG dusB 3615940 - 3616905 + | tRNA-dihydrouridine synthase B fis 3616931 - 3617227 + | global DNA-binding transcriptional dual regulator TERM 4855 3617284 - 3617259 - f 78 -6 -4.7254 | opp_overlap 3617259 ATGCTTGATTAAAAA GGCGCTACTC GGCATG GGGAAGCGCC TTTTTTATAGGTGTC TERM 4856 3617259 - 3617284 + F 91 -8.2 -5.29782 | opp_overlap 3617259 ATGCTTGATTAAAAA GGCGCTACTC GGCATG GGGAAGCGCC TTTTTTATAGGTGTC TERM 4857 3618150 - 3618136 - g 88 -5.6 -5.21683 | AGTGAAAAAAAGAAA GACCGG CAA CCTGTC AAAACGAAGCCGGTT yhdJ 3617315 - 3618199 + | methyltransferase yhdU 3618283 - 3618462 + | hypothetical protein envR 3619127 - 3618465 - | DNA-binding transcriptional regulator acrE 3619527 - 3620684 + | cytoplasmic membrane lipoprotein acrF 3620696 - 3623800 + | multidrug efflux system protein TERM 4858 3623830 - 3623815 - f 77 -7.5 -4.42513 | opp_overlap 3623815 AATCAGAAACATAAA GGCGC TTTCAG GCGCC TTTTTTATTTTCAGT TERM 4859 3623815 - 3623830 + F 100 -8.2 -5.80951 | opp_overlap 3623815 AATCAGAAACATAAA GGCGCT TTCA GGCGCC TTTTTTATTTTCAGT yhdV 3624053 - 3624274 + | conserved hypothetical protein; putative outer membrane protein TERM 4860 3624308 - 3624275 - f 82 -10.3 -3.90744 | opp_overlap 3624282, overlap 3624276 3624280 3624282 GCTCTGTCGAAATAA CTAAACAGGGCGCGG AGCT CCGCGCTCTTTTTAA CGATACAGTATCTTT TERM 4861 3624307 - 3624276 - f 78 -11.6 -2.94232 | opp_overlap 3624282, overlap 3624275 3624280 3624282 CTCTGTCGAAATAAC TAAACAGGGCGCGG AGCT CCGCGCTCTTTTTA ACGATACAGTATCTT TERM 4862 3624303 - 3624280 - f 74 -8 -4.14764 | opp_overlap 3624282, overlap 3624276 3624275 3624282 GTCGAAATAACTAAA CAGGGCGCGG AGCT CCGCGCTCTT TTTAACGATACAGTA TERM 4863 3624282 - 3624301 + F 100 -12.8 -4.59773 | opp_overlap 3624280 3624276 3624275 3624282 CGAAATAACTAAACA GGGCGCGG AGCT CCGCGCTC TTTTTAACGATACAG TERM 4864 3624301 - 3624282 - f 83 -10.6 -3.66237 | opp_overlap 3624282, overlap 3624280 3624276 3624275 CGAAATAACTAAACA GGGCGCGG AGCT CCGCGCTC TTTTTAACGATACAG TERM 4865 3624501 - 3624519 + F 78 -10.3 -3.695 | opp_overlap 3624489 3624498 3624496, overlap 3624499 AACGCGTAAATATTT TGCGCCA AAATG TGGCGCA TGTTTCATTTTCGCA TERM 4866 3624670 - 3624654 - f 84 -9.5 -4.27259 | opp_overlap 3624656, overlap 3624667 CACAGACAGGTAAAA GACGTTT CCC AAACGTC CTATAACGATAATTT aapJ 3624813 - 3625730 + | amino-acid transporter subunit ; periplasmic-binding component of ABC superfamily TERM 4867 3625747 - 3625768 + F 87 -13.7 -3.07233 | opp_overlap 3625746 3625749, overlap 3625749 3625764 TCGGTGTGAGGTAAC GAGCGTCGC TACG GCGGCGCTC TCTTCAGCGTTATGC TERM 4868 3625749 - 3625766 + F 73 -10.5 -3.09135 | opp_overlap 3625746 3625749, overlap 3625747 3625764 GGTGTGAGGTAACGA GCGTCGC TACG GCGGCGC TCTCTTCAGCGTTAT aapQ 3625798 - 3626979 + | amino-acid transporter subunit ; membrane component of ABC superfamily aapM 3626989 - 3628092 + | amino-acid transporter subunit ; membrane component of ABC superfamily aapP 3628100 - 3628858 + | amino-acid transporter subunit ; ATP-binding component of ABC superfamily TERM 4869 3628885 - 3628904 + F 100 -13.6 -3.83214 | opp_overlap 3628885, overlap 3628874 TTCGAAAAGCAAAAA GGCCATCC TTTC GGATGGCC TTTCGCTTGATTTGA TERM 4870 3628904 - 3628885 - f 100 -13.6 -5.0925 | opp_overlap 3628874 3628885 TTCGAAAAGCAAAAA GGCCATCC TTTC GGATGGCC TTTCGCTTGATTTGA TERM 4871 3630485 - 3630496 + F 71 -4.4 -4.7254 | CCACTTTCGTGTTTG CACA GTGC TGTG TTTTTAATAAACAGT TERM 4872 3631786 - 3631798 + F 70 -6.2 -4.2354 | AGGTTCTTTTTCACT CCCC TCGCC GGGG TTCTTTTCGCCTTTC TERM 4873 3632340 - 3632364 + F 72 -8 -3.93061 | gap 1, opp_overlap 3632346 AAAATTTGAGAGACT CAC-GAACAAC TTTC GTTGTTCAGTG TTTCAATTTTCAGCT TERM 4874 3632403 - 3632440 + F 100 -6.3 -5.68438 | opp_overlap 3632399 3632405, overlap 3632405 ATTTTTAAAGAGCAA AACTTCGCAGTGAACCT TTGC AGGTACACTCTGAAGTA TTTTTTATTTAATCA TERM 4875 3632405 - 3632438 + F 88 -8.9 -4.47052 | opp_overlap 3632399 3632405, overlap 3632403 TTTTAAAGAGCAAAA CTTCGCAGTGAACCT TTGC AGGTACACTCTGAAG TATTTTTTATTTAAT TERM 4876 3632438 - 3632405 - f 77 -6.7 -4.49756 | opp_overlap 3632405 3632403, overlap 3632399 TTTTAAAGAGCAAAA CTTCGCAGTGAACCT TTGC AGGTACACTCTGAAG TATTTTTTATTTAAT TERM 4877 3634450 - 3634462 + G 74 -7.7 -4.00532 | CACTGTCGCGAGGTG GCGTA TAT TACGC TTTCCTCTTTCAGAG TERM 4878 3634482 - 3634496 + G 100 -4.2 -5.61913 | opp_overlap 3634482, overlap 3634483 CTCTTTCAGAGTCAA CCCTGA ACT TCAGGA TTTTTTCTCTTTGTT TERM 4879 3634483 - 3634495 + G 72 -7.7 -3.93487 | opp_overlap 3634482, overlap 3634482 TCTTTCAGAGTCAAC CCTGA ACT TCAGG ATTTTTTCTCTTTGT yrdA 3634415 - 3635296 + | hypothetical protein yrdB 3635529 - 3635272 - | hypothetical protein aroE 3636344 - 3635526 - | dehydroshikimate reductase, NAD(P)-binding yrdC 3636921 - 3636349 - | putative ribosome maturation factor yrdD 3637468 - 3636926 - | putative DNA topoisomerase TERM 4880 3636981 - 3636971 - G 70 -5.4 -4.38712 | TTTACTGGCACAAAA GTGT TTT ACAC CCTGCGCGGTTTTCT TERM 4881 3637342 - 3637306 - G 89 -13.1 -3.34233 | overlap 3637309 3637335 CCAGAACTTTGACAA TATGTCCATCCGCTGAA GAT TTCAGAGGACGGACGTA GTCACACGCCGGATA TERM 4882 3637339 - 3637309 - G 89 -14.8 -2.53747 | overlap 3637306 3637335 GAACTTTGACAATAT GTCCATCCGCTGAA GAT TTCAGAGGACGGAC GTAGTCACACGCCGG smg 3637970 - 3637497 - | hypothetical protein smf 3639066 - 3637942 - | hypothetical protein def 3639196 - 3639705 + | peptide deformylase TERM 4883 3639766 - 3639788 + G 100 -14.9 -3.7821 | GTACACCTGACTTTG CAGCGCGTC ATCTC GACGCGCTG TTGTCTTCTGGTCAT TERM 4884 3639868 - 3639858 - g 74 -3.2 -5.02074 | GGACGCGGTAAAAAA CTGA TGC CCAG CCCGGTTAAAGTTCT TERM 4885 3639951 - 3639941 - g 85 -6.8 -4.77165 | overlap 3639942 GCGTCCACAAGAAAA CCAG CAA CTGG TCGCCGATCTGCAGG fmt 3639720 - 3640667 + | 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet) N-formyltransferase TERM 4886 3640681 - 3640703 + F 77 -7.6 -4.42513 | overlap 3640683 3640684 GATAGTCCACTCTTC TAAGCCCGGT CTT ACCGGGCATC TTTATATTTATACTT TERM 4887 3640683 - 3640701 + F 80 -10.2 -3.79866 | overlap 3640681 3640684 TAGTCCACTCTTCTA AGCCCGGT CTT ACCGGGCA TCTTTATATTTATAC TERM 4888 3640684 - 3640700 + F 87 -13.7 -2.86835 | overlap 3640683 3640681 AGTCCACTCTTCTAA GCCCGGT CTT ACCGGGC ATCTTTATATTTATA TERM 4889 3640744 - 3640728 - g 88 -5.1 -5.17353 | overlap 3640731 ATACTTATGAAAAAA CAACGTA ATT TACGTAG CATGGCGGCCCAGGC TERM 4890 3640741 - 3640731 - g 75 -5.4 -4.67552 | overlap 3640728 CTTATGAAAAAACAA CGTA ATT TACG TAGCATGGCGGCCCA rsmB 3640719 - 3642008 + | 16S rRNA m5C967 methyltransferase, S-adenosyl-L-methionine-dependent trkA 3642030 - 3643406 + | NAD-binding component of TrK potassium transporter TERM 4891 3643408 - 3643435 + F 100 -15.8 -3.89938 | opp_overlap 3643411 3643414, overlap 3643411 3643414 CTTTCTTCTTGTAAT TAATAAGGCGTC TAAT GACGCCTTATTA TTTCCCTTTGATTAT TERM 4892 3643432 - 3643411 - f 95 -13.1 -3.33696 | opp_overlap 3643408 3643411 3643414, overlap 3643414 TCTTCTTGTAATTAA TAAGGCGTC TAAT GACGCCTTA TTATTTCCCTTTGAT TERM 4893 3643411 - 3643432 + F 100 -13.1 -4.05629 | opp_overlap 3643411 3643414, overlap 3643408 3643414 TCTTCTTGTAATTAA TAAGGCGTC TAAT GACGCCTTA TTATTTCCCTTTGAT TERM 4894 3643429 - 3643414 - f 80 -10.4 -3.81146 | opp_overlap 3643411 3643408 3643414, overlap 3643411 TCTTGTAATTAATAA GGCGTC TAAT GACGCC TTATTATTTCCCTTT TERM 4895 3643414 - 3643429 + F 82 -10.4 -4.13254 | opp_overlap 3643414 3643411, overlap 3643411 3643408 TCTTGTAATTAATAA GGCGTC TAAT GACGCC TTATTATTTCCCTTT mscL 3643536 - 3643949 + | mechanosensitive channel TERM 4896 3644012 - 3643966 - T 100 -19.7 -2.90992 | overlap 3643954 3643969 AAGCGTCTGAAAGCA GAAGGCCAGTGGTAAAAAAGT GATTT ACTTTCTTGCCACTGGCCTCC CAGTTCCCCCGATTG TERM 4897 3644009 - 3643969 - T 100 -17.8 -3.60151 | overlap 3643966 CGTCTGAAAGCAGAA GGCCAGTGGTAAAAAAGT GATTT ACTTTCTTGCCACTGGCC TCCCAGTTCCCCCGA yhdL 3644164 - 3643946 - | hypothetical protein zntR 3644645 - 3644220 - | DNA-binding transcriptional activator in response to Zn(II) TERM 4898 3644308 - 3644282 - G 70 -5.9 -4.26871 | gap 1, overlap 3644274 3644284 GAATCGAGCAATAAA CACTGCTATGGG CGGT CCCACAACAG-G TATCATTAAGGCGTT TERM 4899 3644307 - 3644284 - G 76 -9.6 -3.72775 | overlap 3644274 3644282 ATCGAGCAATAAACA CTGCTATGGG CGGT CCCACAACAG GTATCATTAAGGCGT yhdN 3645024 - 3644656 - | hypothetical protein TERM 4900 3645087 - 3645120 + r 85 -11.9 -3.37879 | opp_overlap 3645097, overlap 3645088 3645097 TGGGGATGCTACGGG TATAAAAAAACCCGC CGGG GCGGGTTTTTTTACG TTGCTTCAGATTACT TERM 4901 3645088 - 3645119 + r 84 -13.2 -2.62246 | opp_overlap 3645097, overlap 3645087 3645097 GGGGATGCTACGGGT ATAAAAAAACCCGC CGGG GCGGGTTTTTTTAC GTTGCTTCAGATTAC TERM 4902 3645110 - 3645097 - R 100 -9.5 -5.61596 | opp_overlap 3645088 3645087 3645097 ACGGGTATAAAAAAA CCCGC CGGG GCGGG TTTTTTTACGTTGCT TERM 4903 3645097 - 3645110 + r 100 -9.5 -5.54192 | opp_overlap 3645097, overlap 3645088 3645087 ACGGGTATAAAAAAA CCCGC CGGG GCGGG TTTTTTTACGTTGCT TERM 4904 3645120 - 3645145 + r 72 -8.3 -3.67102 | overlap 3645141 GGCGGGTTTTTTTAC GTTGCTTCAGA TTAC TCTGCAGCAGC TTCTGCTTTCTCTGA TERM 4905 3645141 - 3645151 + r 70 -6.8 -4.0371 | overlap 3645120 TCAGATTACTCTGCA GCAG CTT CTGC TTTCTCTGAACGATC rplQ 3645514 - 3645131 - | 50S ribosomal subunit protein L17 rpoA 3646544 - 3645555 - | RNA polymerase, alpha subunit TERM 4906 3645638 - 3645650 + g 74 -3.4 -5.01732 | CCAGCACGTCTTTAA TCTC AGTAA GAGA TTTTTTACCAAGGTT TERM 4907 3646585 - 3646567 - R 74 -10.4 -3.14132 | TCTCTTTGGTACTAA GCTTTACT TGG AGTAAAGC TCGACGATCAGGTGT rpsD 3647190 - 3646570 - | 30S ribosomal subunit protein S4 TERM 4908 3646680 - 3646690 + g 70 -6.8 -4.12188 | overlap 3646677 CAGCATCAACTTCCA GCCA GGT TGGC TTTTCACGCTGCTCA TERM 4909 3647217 - 3647235 + r 75 -4.4 -5.00616 | opp_overlap 3647208 3647217 AACAAACCTGGAAAA CGAGGCGT TAT ACGCGACG TTTTTTCGGCGGACG rpsK 3647613 - 3647224 - | 30S ribosomal subunit protein S11 TERM 4910 3647647 - 3647672 + r 71 -8.9 -3.39449 | overlap 3647648 ATTTCTTGATCGGTT TGCGCGGACCC TTAC GGGTACGTGCG TTGGTCTTGGTACGC TERM 4911 3647648 - 3647671 + r 70 -10.2 -2.63348 | overlap 3647647 TTTCTTGATCGGTTT GCGCGGACCC TTAC GGGTACGTGC GTTGGTCTTGGTACG rpsM 3647986 - 3647630 - | 30S ribosomal subunit protein S13 TERM 4912 3647811 - 3647829 + g 77 -8.8 -4.05446 | ACAAATTTGGCAACT TCGTCACG CAG CGTGTCGA TTTGTCCTTCAGACA TERM 4913 3648103 - 3648074 - R 100 -12.3 -4.6645 | gap 1 CACAGACATACAAAA GATTG-GCTGGCTA ATC TAGCCAGCTCAACC CAACTTTGCAAGAAA secY 3649612 - 3648281 - | preprotein translocase membrane subunit TERM 4914 3648814 - 3648768 - G 73 -9.4 -3.56921 | opp_overlap 3648774 3648782, overlap 3648766 GGGAACAGAATAATA CTGGAAGCGAAGATTGCCGGGA TTA CCCCCGCCATATTCACTTTCAG CGGTAAATGTGTGCT TERM 4915 3649179 - 3649148 - G 74 -10.2 -3.51032 | opp_overlap 3649154, overlap 3649154 AGCGGTGAAGTAGAA TGCAAAGCCCGG GTTAATGA CCAGGCCTTGCA TACCAGGCATATTCG rplO 3650054 - 3649620 - | 50S ribosomal subunit protein L15 TERM 4916 3650000 - 3650013 + g 75 -5.2 -4.59853 | opp_overlap 3649993, overlap 3649993 CGATACCACGACCCA GGCG TTTACC CGCC TTTTTGGAGCCTTCG rpmD 3650237 - 3650058 - | 50S ribosomal subunit protein L30 rpsE 3650744 - 3650241 - | 30S ribosomal subunit protein S5 rplR 3651112 - 3650759 - | 50S ribosomal subunit protein L18 rplF 3651655 - 3651122 - | 50S ribosomal subunit protein L6 rpsH 3652060 - 3651668 - | 30S ribosomal subunit protein S8 rpsN 3652399 - 3652094 - | 30S ribosomal subunit protein S14 rplE 3652953 - 3652414 - | 50S ribosomal subunit protein L5 TERM 4917 3652791 - 3652809 + g 93 -6 -5.24531 | TTGCTGCCAGGTCTG CTGCTG CGTTATC CAGCAG TTTTTTGTCAGCGAT TERM 4918 3652897 - 3652908 + g 81 -4.4 -5.12617 | opp_overlap 3652897, overlap 3652876 AGAATTGTAGTTAAA CTCA GTCA TGAG TTTTTTAACTACTTC rplX 3653282 - 3652968 - | 50S ribosomal subunit protein L24 rplN 3653664 - 3653293 - | 50S ribosomal subunit protein L14 TERM 4919 3653804 - 3653779 - R 100 -14.9 -5.252 | opp_overlap 3653779 3653783 TATGGGTAGAAAAAA TAAACGGCTCA TTTC TGAGCCGTTTA TTCGTATCGAGAGAG TERM 4920 3653779 - 3653804 + r 95 -14.9 -3.25823 | opp_overlap 3653779, overlap 3653783 TATGGGTAGAAAAAA TAAACGGCTCA TTTC TGAGCCGTTTA TTCGTATCGAGAGAG TERM 4921 3653783 - 3653800 + r 93 -11.3 -4.29106 | opp_overlap 3653779, overlap 3653779 GGTAGAAAAAATAAA CGGCTCA TTTC TGAGCCG TTTATTCGTATCGAG rpsQ 3654083 - 3653829 - | 30S ribosomal subunit protein S17 TERM 4922 3654051 - 3654004 - G 86 -9.5 -4.36914 | gap 2, opp_overlap 3654023 GGGTGTTTCACAAAA CGTTCGATAGCAACAACAATGGA TTTC TCCATT-TTGTCGCTAAC-AACG CGACCTTGCAGAGTA rpmC 3654274 - 3654083 - | 50S ribosomal subunit protein L29 rplP 3654684 - 3654274 - | 50S ribosomal subunit protein L16 rpsC 3655398 - 3654697 - | 30S ribosomal subunit protein S3 rplV 3655748 - 3655416 - | 50S ribosomal subunit protein L22 rpsS 3656041 - 3655763 - | 30S ribosomal subunit protein S19 rplB 3656879 - 3656058 - | 50S ribosomal subunit protein L2 TERM 4923 3656915 - 3656935 + r 77 -9.7 -3.57462 | opp_overlap 3656918, overlap 3656918 CTCAGCGCCGCCAAC GAAGTCCAG ATT CTGGCCTTC TTTCAGGGTGACGTA rplW 3657199 - 3656897 - | 50S ribosomal subunit protein L23 TERM 4924 3657166 - 3657154 - G 78 -9.1 -3.85817 | ACGCTTTTTCAGAAA CGTGC GGT GCACG CAGCACCTTCAGCAG rplD 3657801 - 3657196 - | 50S ribosomal subunit protein L4 TERM 4925 3657769 - 3657781 + g 78 -10.5 -3.42663 | opp_overlap 3657764, overlap 3657768 TTCGGAAACAGTCAG CGCGC TCT GCGCG TCTTTCAATACTAAT rplC 3658441 - 3657812 - | 50S ribosomal subunit protein L3 rpsJ 3658785 - 3658474 - | 30S ribosomal subunit protein S10 pioO 3659442 - 3659023 - | part of gsp divergon involved in type II protein secretion gspA 3660913 - 3659444 - | general secretory pathway component, cryptic gspC 3661093 - 3661908 + | general secretory pathway component, cryptic TERM 4926 3663101 - 3663088 - g 70 -4.5 -4.56153 | overlap 3663089 TGATTATAAAAAGAA TGGCG GGAT CACCA GCGCGAATCCTGCCT gspD 3661892 - 3663844 + | general secretory pathway component, cryptic TERM 4927 3664286 - 3664257 - g 82 -2.7 -5.19261 | opp_overlap 3664268, overlap 3664260 3664261 AAACCTATGAAAAAA CAATGTCGATCCG TTTT CGCATCGACGGCG TTTTGCGGACAATTT TERM 4928 3664283 - 3664260 - g 75 -5.2 -4.67552 | opp_overlap 3664268, overlap 3664257 3664261 CCTATGAAAAAACAA TGTCGATCCG TTTT CGCATCGACG GCGTTTTGCGGACAA gspE 3663854 - 3665335 + | general secretory pathway component, cryptic TERM 4929 3666239 - 3666221 - g 73 -9.6 -3.64049 | TCAACAACCTCGAAA TTCGCCAG CGC CTGGCAAA TGCGGCAGAAAACGT gspF 3665332 - 3666528 + | general secretory pathway component, cryptic gspG 3666538 - 3666975 + | pseudopilin, cryptic, general secretion pathway gspH 3666983 - 3667492 + | putative general secretory pathway component, cryptic gspI 3667489 - 3667884 + | general secretory pathway component, cryptic gspJ 3667877 - 3668464 + | putative general secretory pathway component, cryptic TERM 4930 3669364 - 3669378 + G 86 -4.2 -5.41143 | opp_overlap 3669354, overlap 3669366 ACGAACAATCCCAGG GATGGC AAA GCCATA TTTTTTTCAACCGTA TERM 4931 3669366 - 3669376 + G 75 -6.8 -4.34482 | opp_overlap 3669354, overlap 3669364 GAACAATCCCAGGGA TGGC AAA GCCA TATTTTTTTCAACCG gspK 3668457 - 3669440 + | general secretory pathway component, cryptic gspL 3669455 - 3670618 + | general secretory pathway component, cryptic TERM 4932 3670652 - 3670642 - g 71 -3.2 -4.82901 | TGGTGGGCAGAAAAA TCCA CAT CGGA AAAACAGATCGTTGC TERM 4933 3670893 - 3670873 - g 70 -4.7 -4.56133 | CTCGAAGAAGCAAAA CGTGAGAAT TTG ACTATCACG CTGGAAAACGGTCCG gspM 3670615 - 3671076 + | general secretory pathway component, cryptic gspO 3671076 - 3671753 + | bifunctional prepilin leader peptidase and methylase TERM 4934 3671775 - 3671754 - T 93 -13.7 -3.14931 | TGGATCTCTTATTAA CCGGGAGGG TTCT CCCTCCCGA CACGGCTCAACCTTC bfr 3672258 - 3671782 - | bacterioferritin, iron storage and detoxification protein bfd 3672524 - 3672330 - | bacterioferritin-associated ferredoxin TERM 4935 3672652 - 3672626 - R 100 -10.2 -5.20606 | overlap 3672629 AAATATGAATAAAAA TAATGGGCTACC AAA AGTAGCCCATTG ACAAAAAATGCGGCG TERM 4936 3672649 - 3672629 - R 100 -11.9 -4.66002 | overlap 3672626 TATGAATAAAAATAA TGGGCTACC AAA AGTAGCCCA TTGACAAAAAATGCG TERM 4937 3672689 - 3672661 - R 100 -10.4 -5.28176 | gap 1, opp_overlap 3672660 3672661, overlap 3672663 CCCATTGACAAAAAA TG-CGGCGATACC GGAA GGTATCGCCAACA CATTTATTGCTTAGT TERM 4938 3672686 - 3672663 - R 86 -13.2 -2.84986 | opp_overlap 3672661 3672660, overlap 3672661 CATTGACAAAAAATG CGGCGATACC GGAA GGTATCGCCA ACACATTTATTGCTT chiA 3675395 - 3672693 - | periplasmic endochitinase TERM 4939 3673701 - 3673691 - G 74 -2.4 -5.10461 | opp_overlap 3673691, overlap 3673685 TCCAGTCAACAAAAA CACG CCA CGGG TTGCTGTCAGAAGGA TERM 4940 3674708 - 3674724 + g 72 -8.7 -3.80893 | GACCTTTCCAGGCTA CGACAGC ATA GTTGTCG TTTGACTTATCAGCT TERM 4941 3675541 - 3675590 + r 73 -6.2 -4.36596 | opp_overlap 3675542 3675544 3675585, overlap 3675542 3675544 3675584 3675585 ATTTTAAAAACAGAA ACATTCATATTTAAAATATTAA ATTGAA TTGATATTTTAAATATGAATAA TTTATTCGTTCTGAC TERM 4942 3675589 - 3675542 - R 89 -9.7 -4.55887 | opp_overlap 3675541 3675542 3675544 3675584 3675585, overlap 3675544 3675585 TTTTAAAAACAGAAA CATTCATATTTAAAATATTAA ATTGAA TTGATATTTTAAATATGAATA ATTTATTCGTTCTGA TERM 4943 3675542 - 3675589 + r 72 -9.7 -3.21235 | opp_overlap 3675542 3675544 3675585, overlap 3675541 3675544 3675584 3675585 TTTTAAAAACAGAAA CATTCATATTTAAAATATTAA ATTGAA TTGATATTTTAAATATGAATA ATTTATTCGTTCTGA TERM 4944 3675587 - 3675544 - R 82 -10.1 -3.87576 | opp_overlap 3675544 3675542 3675541 3675584 3675585, overlap 3675542 3675585 TTAAAAACAGAAACA TTCATATTTAAAATATTAA ATTGAA TTGATATTTTAAATATGAA TAATTTATTCGTTCT TERM 4945 3675544 - 3675587 + r 86 -12.3 -3.15732 | opp_overlap 3675542 3675544 3675585, overlap 3675542 3675541 3675584 3675585 TTAAAAACAGAAACA TTCATATTTAAAATATTAA ATTGAA TTGATATTTTAAATATGAA TAATTTATTCGTTCT TERM 4946 3675657 - 3675642 - R 100 -11.8 -4.86939 | opp_overlap 3675642 CAACAAATGCAAAAA GGGCGC CGAA GCGCCC TTTTCAATTCAAAAC TERM 4947 3675642 - 3675657 + r 95 -11.8 -4.27316 | opp_overlap 3675642 CAACAAATGCAAAAA GGGCGC CGAA GCGCCC TTTTCAATTCAAAAC tufA 3676871 - 3675687 - | protein chain elongation factor EF-Tu (duplicate of tufB) TERM 4948 3676916 - 3676891 - R 93 -15.5 -2.78935 | opp_overlap 3676887 3676886 ATATTCCTTACTATA GTGCTCTCCCC TTCA GGAGAGAGCAC GGGACTTTGGTATTA fusA 3679056 - 3676942 - | protein chain elongation factor EF-G, GTP-binding TERM 4949 3679128 - 3679103 - R 87 -11.2 -3.63895 | gap 1, opp_overlap 3679093, overlap 3679093 TTTAAGTAGCCCAAA GCGGGCTGCTT ACTGG AAGC-GCCCGC CTGGTGACTAAAACT rpsG 3679623 - 3679153 - | 30S ribosomal subunit protein S7 rpsL 3680094 - 3679720 - | 30S ribosomal subunit protein S12 TERM 4950 3680164 - 3680142 - R 100 -12.8 -4.7268 | AAACACGTAATAAAA CGTCCTCACA CAA TATGAGGACG CCGAATTTTAGGGCG tusB 3680507 - 3680220 - | methylsulfur transfer protein tusC 3680873 - 3680514 - | methylsulfur transfer protein tusD 3681259 - 3680873 - | methylsulfur transfer protein yheO 3681981 - 3681259 - | putative DNA-binding transcriptional regulator TERM 4951 3681776 - 3681807 + g 76 -7.4 -4.21194 | gap 1 ATCTTCCGGCCTGTA TGTTCA-CCGTTAGC AAT GCGAATGGCTGAACA TTTTAGATCCTGCAA TERM 4952 3682006 - 3681993 - R 79 -6.7 -4.59226 | opp_overlap 3682003 3682004 ACATGAAAAAAAACA CTCCT TTTC AGGAG CCTGTCGTTAACTTT TERM 4953 3682065 - 3682077 + r 73 -9.1 -3.54919 | opp_overlap 3682063 3682061 3682065 AACTAAATTAATACA GCGGA GGT TCCGC TTTCCAGCACTAATT TERM 4954 3682077 - 3682065 - R 70 -9.1 -3.24804 | opp_overlap 3682065, overlap 3682063 3682061 AACTAAATTAATACA GCGGA GGT TCCGC TTTCCAGCACTAATT TERM 4955 3682104 - 3682147 + r 71 -4.7 -4.61482 | gap 2, opp_overlap 3682116, overlap 3682105 3682116 AATTATATCCGGCCT GTAATAAAAAAACCGCCGCCT GGTC AGGCGGCGG--TTCTTAGTGC TTATTTTTTAGCAGA TERM 4956 3682105 - 3682150 + r 74 -4.2 -5.0133 | gap 2, opp_overlap 3682116, overlap 3682104 3682116 ATTATATCCGGCCTG TAA-TA-AAAAAACCGCCGCCT GGTC AGGCGGCGGTTCTTAGTGCTTA TTTTTTAGCAGAGTC TERM 4957 3682116 - 3682137 + r 100 -17.3 -3.79396 | opp_overlap 3682116, overlap 3682104 3682105 CCTGTAATAAAAAAA CCGCCGCCT GGTC AGGCGGCGG TTCTTAGTGCTTATT TERM 4958 3682137 - 3682116 - R 100 -17.3 -5.7946 | opp_overlap 3682116 3682104 3682105 CCTGTAATAAAAAAA CCGCCGCCT GGTC AGGCGGCGG TTCTTAGTGCTTATT fkpA 3682960 - 3682148 - | FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) slyX 3683181 - 3683399 + | hypothetical protein TERM 4959 3683438 - 3683400 - T 100 -16.8 -3.24747 | opp_overlap 3683400 3683412, overlap 3683412 CCGCCACATTATTAA GGCGTAAAAAAAGCGGGG ATT CCCCGCTTTTTTGTCACC TTTTCGGTATTAGTG TERM 4960 3683400 - 3683438 + T 100 -14.6 -4.29325 | opp_overlap 3683400 3683412, overlap 3683412 CCGCCACATTATTAA GGCGTAAAAAAAGCGGGG ATT CCCCGCTTTTTTGTCACC TTTTCGGTATTAGTG TERM 4961 3683426 - 3683412 - T 100 -12.8 -5.43866 | opp_overlap 3683412 3683400, overlap 3683400 TAAGGCGTAAAAAAA GCGGGG ATT CCCCGC TTTTTTGTCACCTTT TERM 4962 3683412 - 3683426 + T 100 -12.8 -5.28826 | opp_overlap 3683400 3683412, overlap 3683400 TAAGGCGTAAAAAAA GCGGGG ATT CCCCGC TTTTTTGTCACCTTT TERM 4963 3683453 - 3683474 + T 77 -10.1 -3.53012 | CTTTTCGGTATTAGT GGCAACCGC AACC GCCGTTGCC TTTACCGCCACAGCA slyD 3684038 - 3683448 - | FKBP-type peptidyl prolyl cis-trans isomerase (rotamase) TERM 4964 3684012 - 3684023 + g 72 -5.8 -4.39989 | overlap 3683996 CTGATAGGCCAGGCT GACC ACCA GGTC TTTTGCTACTTTCAT yheV 3684333 - 3684133 - | hypothetical protein kefB 3686148 - 3684343 - | potassium:proton antiporter TERM 4965 3685664 - 3685645 - G 77 -10 -3.63569 | CGAACCCGCCAACAA CGGCACTA ACGC CAGTGCCG GGATCACCGCCAGAT kefG 3686702 - 3686148 - | component of potassium effux complex with KefB TERM 4966 3688127 - 3688103 - g 93 -12.9 -3.60798 | overlap 3688099 3688112 AGGGCGATAAAGTAA CCGAAGAAACG CGC CGCTTCTCCGG TGGGGAAAAAGCCCG TERM 4967 3688154 - 3688138 - g 70 -5 -4.56597 | opp_overlap 3688138, overlap 3688112 TCCGGTGGGGAAAAA GCCCGC CTGGT GCTGGC ATTAATTGTCTGGCA yheS 3686830 - 3688743 + | fused putative transporter subunits of ABC superfamily: ATP-binding components TERM 4968 3688896 - 3688909 + G 70 -4.5 -4.45083 | TGGCAGCGGCTGGAG TTGCC CGAC GGCGA TTTTGTCGATCTCGC TERM 4969 3688948 - 3688963 + G 72 -7.5 -3.86835 | overlap 3688959 AAGATCCTGCACAGG CGCGG CATAAA CCGCG TTTAGTGGTATTTCA yheT 3688743 - 3689765 + | putative hydrolase yheU 3689759 - 3689977 + | hypothetical protein prkB 3690031 - 3690900 + | phosphoribulokinase yhfA 3691359 - 3690955 - | hypothetical protein TERM 4970 3691305 - 3691293 - G 76 -7.7 -4.25104 | TGCCGTCCATTAAAA TCTGG TGA CCAGA GGCGGATTCGCCCAG ECS88_3747 3691439 - 3691654 + | hypothetical protein TERM 4971 3691771 - 3691746 - g 70 -10.5 -2.76171 | overlap 3691743 ACCCATCCAAGAGCA CGCTTATTCAC CAGG GTGAAAAAGCG GAAACGCTGTACTAC crp 3691661 - 3692293 + | DNA-binding transcriptional dual regulator TERM 4972 3692300 - 3692334 + F 100 -18 -3.55071 | overlap 3692295 3692305 ACTCGTTAATCCCGT CAGAGTGGCGCGTTAC CTG GTAGCGCGCCATTTTG TTTCCCCCGATGTGG TERM 4973 3692305 - 3692329 + F 100 -16.5 -4.86731 | overlap 3692295 3692300 TTAATCCCGTCAGAG TGGCGCGTTAC CTG GTAGCGCGCCA TTTTGTTTCCCCCGA yhfK 3692332 - 3694434 + | conserved hypothetical protein; putative inner membrane protein TERM 4974 3694476 - 3694449 - T 70 -9.8 -2.93853 | opp_overlap 3694448 3694447 3694466 3694468, overlap 3694446 3694439 3694437 ATACAGGCTAAACCA TCGGATGAGGTG TTCA CGCCGCATCCGA CATCTTTTGCCTGAT argD 3695721 - 3694501 - | bifunctional acetylornithine aminotransferase and succinyldiaminopimelate aminotransferase pabA 3696370 - 3695807 - | aminodeoxychorismate synthase, subunit II fic 3697004 - 3696402 - | stationary-phase protein, cell division TERM 4975 3696699 - 3696713 + g 75 -5.6 -4.59773 | opp_overlap 3696692 3696691, overlap 3696701 CTCCAAATCCTGCAT CAGGGC ATT GCCCTC TTTTTCGAGATAGGC TERM 4976 3696701 - 3696711 + g 74 -8.2 -3.91506 | opp_overlap 3696692 3696691, overlap 3696699 CCAAATCCTGCATCA GGGC ATT GCCC TCTTTTTCGAGATAG yhfG 3697161 - 3696994 - | hypothetical protein TERM 4977 3697256 - 3697235 - R 100 -17.3 -3.46602 | GCCGGGAGAGCAGAA GCGCGGGCA AGAT TGCCCGCGC GAGAAATCATTACGG ppiA 3697838 - 3697266 - | peptidyl-prolyl cis-trans isomerase A (rotamase A) TERM 4978 3698063 - 3698082 + H 87 -6.4 -5.26119 | overlap 3698064 AAAATCGCCCGCTCG CGGCATAG CCCG CTATGCCA TTTTATTTTTGAACG TERM 4979 3698064 - 3698081 + H 79 -9.9 -3.74587 | overlap 3698063 AAATCGCCCGCTCGC GGCATAG CCCG CTATGCC ATTTTATTTTTGAAC TERM 4980 3698154 - 3698177 + G 72 -8.8 -3.78934 | GGATTAGCTTTCTTT CCTACGCACT GACC GGTGCGTTGG TTATTGTCACCGGGA tsgA 3698108 - 3699289 + | putative transporter TERM 4981 3699297 - 3699324 + F 84 -8.3 -4.43815 | overlap 3699296 3699298 CTCATTAATTGTTCA TGCCGGGCGGC ACTATC GTCGTCCGGCC TTTTCCTCTCTTACT TERM 4982 3699298 - 3699323 + F 83 -11.8 -3.25205 | overlap 3699296 3699297 TCATTAATTGTTCAT GCCGGGCGGC ACTATC GTCGTCCGGC CTTTTCCTCTCTTAC TERM 4983 3700903 - 3700874 - g 72 -7.1 -4.24342 | gap 1, overlap 3700847 GCTGCTATCAACAAA GGCTGCCA-CACCG TTG CGGCGCTGAAAGCC GAAACCAAAGCCGGT TERM 4984 3701363 - 3701340 - g 70 -5.2 -4.3467 | gap 1, opp_overlap 3701340 3701351, overlap 3701326 ATCTCTACACCAAAA TCACC-GGCTC TCA GCGCCTGGCGA TGTTTGGCGCACAGA nirB 3699551 - 3702094 + | nitrite reductase, large subunit, NAD(P) H-binding TERM 4985 3702302 - 3702317 + G 70 -6.1 -4.27316 | opp_overlap 3702313 TGTGGGTCGCCAGTC CGCTG AAAAAG CAGCG TTTTCGCTTAAGCGA nirD 3702091 - 3702417 + | nitrite reductase, NAD(P)H-binding, small subunit TERM 4986 3702426 - 3702446 + F 90 -8.9 -4.68994 | overlap 3702427 CGGTTAATATTTTAA CGGGAGGCG CAA TGCCTCCCC TTTTTGCATGGTCCT TERM 4987 3702427 - 3702445 + F 90 -12.4 -3.40674 | overlap 3702426 GGTTAATATTTTAAC GGGAGGCG CAA TGCCTCCC CTTTTTGCATGGTCC TERM 4988 3702456 - 3702489 + F 91 -8.3 -5.16472 | gap 1, overlap 3702457 CTCCCCTTTTTGCAT GGTCCTGTAATA-ACC TTC GGTATATTGCAGGACA TTTTTTAAACTTTTT TERM 4989 3702457 - 3702488 + F 89 -11.8 -3.67443 | gap 1, overlap 3702456 TCCCCTTTTTGCATG GTCCTGTAATA-ACC TTC GGTATATTGCAGGAC ATTTTTTAAACTTTT TERM 4990 3702996 - 3702979 - g 74 -7.7 -4.07568 | opp_overlap 3702979 TTGCGCTGGCTAAAA CCACTGC ACCG GCAATGG TACTGTTCTTCAAAG nirC 3702543 - 3703349 + | nitrite transporter TERM 4991 3703635 - 3703613 - g 81 -13.5 -2.7035 | opp_overlap 3703632, overlap 3703610 3703628 TGCAGCGACAGATGA TGACGCGCT TAACC AGCGCGTCA GCGAAGCCGCTGAAT TERM 4992 3704148 - 3704163 + G 82 -9 -4.25104 | ATGAATCTGATACGC CGCGAT GCTG ATCGCG TTTTCGTCGGCAAAC TERM 4993 3704633 - 3704597 - g 81 -9.3 -4.11484 | opp_overlap 3704609, overlap 3704602 GGCAATTGTCGAAAA CGGAACGGCAGTCACGC AGC GCGTGATTGACGGTACG CTCACGCAGCTGGGC TERM 4994 3704628 - 3704602 - g 76 -10.8 -3.36823 | opp_overlap 3704609, overlap 3704597 TTGTCGAAAACGGAA CGGCAGTCACGC AGC GCGTGATTGACG GTACGCTCACGCAGC cysG 3703368 - 3704741 + | fused siroheme synthase 1, 3-dimethyluroporphyriongen III dehydrogenase and siroheme ferrochelatase ; uroporphyrinogen methyltransferase TERM 4995 3704751 - 3704768 + F 100 -11.3 -4.98531 | opp_overlap 3704750 CATTAATTTAACCAG GGCCAGA GAAG TCTGGCC TTTTTCGTTTACAAC yhfL 3704993 - 3705160 + | conserved hypothetical protein; putative secreted peptide TERM 4996 3705200 - 3705227 + T 100 -15.6 -4.59089 | overlap 3705202 CCGGTTTAATTGCCT GACGCCCTCGGA GTTA TCCGAGGGCGTA TTTGTTTCTGCATTC TERM 4997 3705202 - 3705225 + T 100 -18.2 -3.89305 | overlap 3705200 GGTTTAATTGCCTGA CGCCCTCGGA GTTA TCCGAGGGCG TATTTGTTTCTGCAT yhfS 3706353 - 3705268 - | hypothetical protein yhfT 3707669 - 3706365 - | conserved hypothetical protein; putative inner membrane protein yhfU 3708034 - 3707681 - | hypothetical protein php 3708923 - 3708045 - | putative hydrolase TERM 4998 3708239 - 3708261 + g 76 -7.6 -4.26076 | opp_overlap 3708229 ACCCACGGTCACGTA GCGCATGGAG CAT CGCAATGCGC TTTTCGTCCGGGTAG yhfW 3710146 - 3708920 - | putative mutase yhfX 3711310 - 3710147 - | putative amino acid racemase TERM 4999 3711275 - 3711289 + g 76 -9.2 -3.72984 | opp_overlap 3711274, overlap 3711260 3711287 TGCGGCGGAAATCAG CGCCGG ATT CTGGCG TTTCAATGCTTCTAC TERM 5000 3711334 - 3711348 + r 83 -2.9 -5.54264 | opp_overlap 3711343, overlap 3711338 3711343 CTCGTTTCTGTTCCT TGAAT TAAAT ATTCA TTTTTTTGAATATTT yhfY 3711756 - 3711394 - | hypothetical protein yhfZ 3712678 - 3711773 - | hypothetical protein TERM 5001 3712632 - 3712651 + g 70 -4.2 -4.67552 | overlap 3712633 AACAAATAACGGGCC AGTGTCGT GATA ACGACGCC TTCTTTTTTGATAAA TERM 5002 3712817 - 3712804 - R 100 -9.5 -5.67967 | opp_overlap 3712804 ATGAGGATAAAAAAA CCGGG TTTC CCCGG TTTTTGGCATTAATG TERM 5003 3712804 - 3712817 + r 91 -9.5 -4.67904 | opp_overlap 3712804 ATGAGGATAAAAAAA CCGGG TTTC CCCGG TTTTTGGCATTAATG trpS 3713842 - 3712838 - | tryptophanyl-tRNA synthetase gph 3714593 - 3713835 - | phosphoglycolate phosphatase rpe 3715263 - 3714586 - | D-ribulose-5-phosphate 3-epimerase TERM 5004 3715268 - 3715280 + r 78 -6.3 -4.61482 | TACTGTTTCATCCGC TTCTC CTT GAGAA TTATTTTTTCGCGGG dam 3716117 - 3715281 - | DNA adenine methylase TERM 5005 3715677 - 3715697 + g 79 -2.5 -5.24129 | AGCGAAGTGATACAA CTCTGCTTC CGG GAAATAGGG TTTTTTGTAGCGGCC TERM 5006 3715808 - 3715788 - G 82 -3.1 -5.19879 | overlap 3715790 3715793 GTTCAAATATAAAAA CAGTACCGC CCG ACGGAACGG ATCCTGGCTTTTGTT TERM 5007 3716001 - 3715980 - G 100 -13.1 -4.60073 | overlap 3715995 GATATAACGAGAAAA GTCGGTGTT GAGA AACACCGAC CCGGCACCTACAAAA TERM 5008 3716213 - 3716186 - R 81 -12 -3.05596 | opp_overlap 3716181 3716181 CAGCGCTTCAGGCAA CGCCCGCAATGA TAAA CCATTGCGGGAG ATAACCTTGATTACT damX 3717510 - 3716224 - | hypothetical protein TERM 5009 3717586 - 3717568 - R 78 -11 -3.15621 | opp_overlap 3717565, overlap 3717566 AACCTGAAGCTAATA GACCGCTT GAT AAGCGGCC TGACCTTTCTTGTTG aroB 3718690 - 3717602 - | 3-dehydroquinate synthase aroK 3719268 - 3718747 - | shikimate kinase I TERM 5010 3719056 - 3719074 + g 72 -4.5 -4.64676 | AATACCCTGTTTCTC GGTCAAC TCATT GATGACC TTTTCTTCGCGATCG TERM 5011 3719332 - 3719306 - R 82 -10 -4.05446 | TTCGTTAATGATAAA CCCGCTTCGCTC AGA GAGCGCCGCAGG ACATGAACTGAAACC TERM 5012 3719527 - 3719511 - R 83 -6.5 -5.06451 | GATTAGCGTAAAAAA GACAGCA AAA TGCCGCC TGAATGATAAATCAT hofQ 3720907 - 3719669 - | fimbrial transporter TERM 5013 3719835 - 3719821 - GR 75 -5.6 -4.59773 | TTTTACGGGTAAAAA TGCCGC CCA GCGCCA ACGTTTCTCCGCTTT yrfA 3721223 - 3720819 - | hypothetical protein yrfB 3721653 - 3721213 - | hypothetical protein yrfC 3722176 - 3721637 - | putative fimbrial assembly protein (pilN-like) yrfD 3722955 - 3722176 - | putative pilus assembly protein mrcA 3723075 - 3725627 + | fused penicillin-binding protein 1a: murein transglycosylase ; murein transpeptidase TERM 5014 3725628 - 3725655 + T 77 -11.4 -2.83522 | opp_overlap 3725635, overlap 3725635 3725644 CAGGAATTGTTCTGA TTAAAAAGGCGC TTCG GCGCCTTTTTCA GTTTGCTGACAAAGT TERM 5015 3725648 - 3725635 - T 91 -9.5 -4.72272 | opp_overlap 3725628 3725635 3725644 TGTTCTGATTAAAAA GGCGC TTCG GCGCC TTTTTCAGTTTGCTG TERM 5016 3725635 - 3725648 + T 91 -9.5 -4.82855 | opp_overlap 3725635, overlap 3725628 3725644 TGTTCTGATTAAAAA GGCGC TTCG GCGCC TTTTTCAGTTTGCTG TERM 5017 3725733 - 3725722 - T 79 -3 -5.4505 | opp_overlap 3725722 CCGGCCAACAAAAAA TTGA AAAT TCAA TAAATTGCAGGAACT nudE 3726353 - 3725793 - | ADP-ribose diphosphatase igaA 3726673 - 3728808 + | intracellular growth attenuator protein TERM 5018 3728850 - 3728809 - f 77 -9.5 -3.67775 | gap 1, opp_overlap 3728813, overlap 3728812 AGCCTTATCGAATAA CACGTTTGCGCGGCAGGTTA TGC TACCCTGTCGCGCAAAT-TG CTTCACTCTGGAGAT TERM 5019 3728848 - 3728812 - f 81 -12.3 -2.64872 | opp_overlap 3728813, overlap 3728809 CTTATCGAATAACAC GTTTGCGCGGCAGGTTA TGC TACCCTGTCGCGCAAAT TGCTTCACTCTGGAG TERM 5020 3728813 - 3728847 + F 100 -18 -3.39142 | opp_overlap 3728812 3728809 TTATCGAATAACACG TTTGCGCGGCAGGTTA TGC TACCCTGTCGCGCAAA TTGCTTCACTCTGGA yrfG 3728873 - 3729541 + | putative hydrolase TERM 5021 3729597 - 3729607 + G 75 -4.6 -4.82901 | CTGGATAAATGGCTA TGGG CTG CCCG TTTTTATAAAACCCG hslR 3729552 - 3729953 + | ribosome-associated heat shock protein Hsp15 TERM 5022 3730305 - 3730280 - g 93 -10.4 -4.44974 | opp_overlap 3730279 CGAAATTCCAGAAAA TGCCGACCTG AAAACG CTGGTCGGCA ATGGTTACGTGGTGA hslO 3729978 - 3730856 + | heat shock protein Hsp33 TERM 5023 3730865 - 3730888 + T 100 -16.8 -4.12188 | opp_overlap 3730860 TCATTAATGAGTATG TCCGGCAGAG AGGA CTCTGCCGGA TTTTACGACTAATAC yhgE 3732643 - 3730919 - | conserved hypothetical protein; putative inner membrane protein TERM 5024 3732509 - 3732497 - G 70 -5.5 -4.34771 | overlap 3732498 TAAAACGGATGAAAA CGCGA CGG TCGCA GGCACGCCATAAACA ECS88_3789 3732850 - 3732719 - | hypothetical protein TERM 5025 3732885 - 3732906 + H 76 -3 -5.26918 | overlap 3732886 CGATAATAGCAACCG TTTCGTGA CAGGAA TCACGGAG TTTTTTGTCAAATAT TERM 5026 3734615 - 3734596 - g 73 -11.4 -2.59797 | overlap 3734595 3734593 CTTCGATAAATACAC CGACACCC CAGC GGGTGCCG CGCTGGTAGCGGCTG pck 3733022 - 3734644 + | phosphoenolpyruvate carboxykinase TERM 5027 3734719 - 3734688 - T 73 -10.2 -3.02698 | opp_overlap 3734693, overlap 3734693 GTATCTTATAGAAAG CAAAACGGGAGGCA CCTT CACCTCCCGTTTTT TTACCCTTCTTTTGT TERM 5028 3734693 - 3734714 + T 100 -8.7 -5.48303 | opp_overlap 3734688 3734693 TTATAGAAAGCAAAA CGGGAGG CACCTTCA CCTCCCG TTTTTTTACCCTTCT TERM 5029 3734714 - 3734693 - T 91 -10.1 -4.65153 | opp_overlap 3734693, overlap 3734688 TTATAGAAAGCAAAA CGGGAGGCA CCTT CACCTCCCG TTTTTTTACCCTTCT envZ 3736072 - 3734720 - | sensory histidine kinase in two-component regulatory system with OmpR TERM 5030 3736017 - 3735985 - G 73 -12 -2.73443 | overlap 3735984 GCACCACCAGATAAG TCGTCACCAGGCTG ACGAA CAGCAAGGTGACGA TGAGCAATAACGTAC ompR 3736788 - 3736069 - | DNA-binding response regulator in two-component regulatory system with EnvZ TERM 5031 3736308 - 3736294 - G 77 -10 -3.63895 | opp_overlap 3736305, overlap 3736298 CTTAAGTACCGCAAA CTCACC ACT GGTGAG CGGCATCGGCTCGTC greB 3737016 - 3737492 + | transcription elongation factor TERM 5032 3739482 - 3739461 - g 84 -7.9 -4.62904 | gap 1, opp_overlap 3739460 3739459, overlap 3739462 AAAGAGCTGGAAAAA CCGGGTCGCG ATC CGCGTCC-GG AATTTAAAACCGCTC yhgF 3737589 - 3739910 + | transcriptional accessory protein TERM 5033 3739968 - 3739935 - f 72 -10.3 -2.94118 | overlap 3739934 3739947 TAGACAAACGTAAAC CTGCCAGATAAAGCG TTCA CGCCGCATCTGGCAA CGAACGCCTTGCCTG TERM 5034 3740013 - 3739992 - f 93 -10.9 -4.52589 | gap 1, opp_overlap 3739993 3739994, overlap 3739993 3739994 TTGCCTGACATAAAA GTGCCGGAGA ATA TCTCCGGC-C TTTTTATTCCACAAG TERM 5035 3739993 - 3740013 + F 100 -11.1 -5.06414 | opp_overlap 3739992 3739993 3739994, overlap 3739994 TGCCTGACATAAAAG TGCCGGAGA ATA TCTCCGGCC TTTTTATTCCACAAG TERM 5036 3740013 - 3739993 - f 80 -11.1 -3.31232 | opp_overlap 3739993 3739994, overlap 3739992 3739994 TGCCTGACATAAAAG TGCCGGAGA ATA TCTCCGGCC TTTTTATTCCACAAG TERM 5037 3739994 - 3740012 + F 100 -14.6 -3.63367 | opp_overlap 3739992 3739993 3739994, overlap 3739993 GCCTGACATAAAAGT GCCGGAGA ATA TCTCCGGC CTTTTTATTCCACAA TERM 5038 3740012 - 3739994 - f 89 -14.6 -2.58418 | opp_overlap 3739994 3739993, overlap 3739992 3739993 GCCTGACATAAAAGT GCCGGAGA ATA TCTCCGGC CTTTTTATTCCACAA feoA 3740350 - 3740577 + | ferrous iron transporter, protein A TERM 5039 3741441 - 3741452 + G 74 -5.8 -4.53036 | TGCTCAACCGTTTCC TCGG TCTG CCGA TTTTCCTCTTTGTGA TERM 5040 3742104 - 3742089 - g 72 -6.8 -4.17657 | TACCACACGTTAAAA GCCTGG TTAT CCAGAC CTGGCAGCGTCTGAA TERM 5041 3742224 - 3742206 - g 88 -8.2 -4.62069 | overlap 3742219 CGCTGAGCGGAAAAA TCGTCGAT AAC ATCAACGA CTCGGCGCTGGCTTC feoB 3740594 - 3742915 + | fused ferrous iron transporter, protein B: GTP-binding protein ; membrane protein yhgG 3742926 - 3743162 + | putative DNA-binding transcriptional regulator TERM 5042 3743213 - 3743189 - f 93 -12.2 -4.07885 | gap 1, opp_overlap 3743189 CACCTGTTTTGAAAA GCCCGGTATGC GTTT GCAT-CCGGGC TTTTTTGCGTGCGGC TERM 5043 3743189 - 3743213 + F 100 -12.2 -5.08824 | gap 1, opp_overlap 3743189 CACCTGTTTTGAAAA GCCCGGTATGC GTTT GCAT-CCGGGC TTTTTTGCGTGCGGC TERM 5044 3743253 - 3743241 - f 80 -6.3 -4.82901 | GGCTTTCCATAAAAA TGCAA CCC TTGCA GCGCGACGTAAATTC TERM 5045 3743392 - 3743376 - g 71 -2.9 -4.77036 | overlap 3743379 CGCCATGAGCAAAAA GCAGAGT TCC ACCCCAC ACGATGCGCTGTTCA yhgA 3743365 - 3744258 + | putative transposase TERM 5046 3744437 - 3744463 + T 74 -10.8 -2.72829 | overlap 3744436 AGAAGAGTTGGCTGC GGCGAGTCAGTA AAG TTCTGTCTCGCC ATTTCAAAAGCTGTC bioH 3745248 - 3744478 - | carboxylesterase of pimeloyl-CoA synthesis TERM 5047 3744551 - 3744538 - G 70 -5.2 -4.44046 | opp_overlap 3744538 CGGATGCGAAATAAA CGGC GCATGG GCCG CTTTGGCGAAAATGT TERM 5048 3744934 - 3744923 - G 72 -7.2 -4.27443 | overlap 3744920 CGAGCACTAAAACAA GGCG ACGA CGCC ACGGTGACCAGCGCC gntX 3745286 - 3745969 + | gluconate periplasmic binding protein with phosphoribosyltransferase domain, GNT I system gntY 3746028 - 3746603 + | putative gluconate transport associated protein gntT 3746964 - 3748280 + | gluconate transporter, high-affinity GNT I system TERM 5049 3748319 - 3748284 - T 74 -9.8 -3.32963 | gap 1, overlap 3748286 3748287 ATGGTGATTTGATAA CACTGACTGCCGGATGC ATC GCATCCGGCA-TCAACC GCACTCTACTTCTTC TERM 5050 3748317 - 3748286 - T 95 -14.6 -3.23393 | gap 1, overlap 3748284 3748287 GGTGATTTGATAACA CTGACTGCCGGATGC ATC GCATCCGGCA-TCAA CCGCACTCTACTTCT TERM 5051 3748316 - 3748287 - T 100 -15.9 -2.53822 | gap 1, overlap 3748286 3748284 GTGATTTGATAACAC TGACTGCCGGATGC ATC GCATCCGGCA-TCA ACCGCACTCTACTTC malQ 3750409 - 3748325 - | 4-alpha-glucanotransferase (amylomaltase) TERM 5052 3748424 - 3748436 + g 74 -3.3 -4.93296 | opp_overlap 3748403 3748424 AAGCGTTGCGGAAAG CTTGC GTC GCCAG TTTTTATACTGGTAA TERM 5053 3749362 - 3749348 - G 74 -10 -3.56092 | overlap 3749349 CCAGCAGGCGGCAAA CTGGCT GTA AGCCAG CCACTGCAACCAGAG TERM 5054 3750254 - 3750280 + g 85 -13.1 -3.18582 | gap 1, overlap 3750251 3750250 3750271 3750272 GACATTCGGGACTGG CGTTACCGCCAC TTTC GTGGCGGTA-CG TTGATGCATCGCGTC malP 3752812 - 3750419 - | maltodextrin phosphorylase TERM 5055 3751329 - 3751345 + g 70 -3.7 -4.62872 | TATTGCTGACGGAAT TTCGC ATCATCA GCGAA TTTTTCCAGATTGAT TERM 5056 3751996 - 3752012 + g 72 -5.1 -4.57073 | CACACTGGAAGTATT GCTGC ATCAGGC GCAGC TTTTTACCGGCAGTA TERM 5057 3753246 - 3753263 + H 70 -6.3 -4.21676 | gap 1, overlap 3753246 3753248 GTACAACCCAGTATT C-ACGCTG GAT CAGCGTCG TTTTAGGTGAGTTGT TERM 5058 3753744 - 3753732 - g 72 -5.5 -4.58663 | overlap 3753733 ACGATGGCGCAAAAA CGGCA ATA TGCCA GCCTGACGTCACTCT TERM 5059 3755753 - 3755775 + G 73 -9.1 -3.65522 | opp_overlap 3755745 3755755 3755766 CATCGAAGGCGAAGC GATGGCGCA ACAAC TGCGCCAGC TTATTCAACTCAATA malT 3753435 - 3756140 + | fused conserved hypothetical protein ; DNA-binding transcriptional activator, maltotriose-ATP-binding rtcA 3757199 - 3756183 - | RNA 3'-terminal phosphate cyclase TERM 5060 3756571 - 3756556 - G 74 -3.2 -4.88407 | opp_overlap 3756561, overlap 3756560 TCATGCAAGGAAAAA CTACCC GCCA GTGTAG CGATTTCACGCTCAG rtcB 3758429 - 3757203 - | hypothetical protein glpR 3760955 - 3760197 - | DNA-binding transcriptional repressor TERM 5061 3760709 - 3760721 + g 90 -6.9 -5.12068 | GCTCCGCCACTTTGC GGGCG ATG CGCTC TTTTTCTTCGGTCTG glpG 3761802 - 3760972 - | putative intramembrane serine protease TERM 5062 3761656 - 3761615 - G 74 -10.1 -3.48276 | opp_overlap 3761604 3761615, overlap 3761616 3761642 CTGGCCGCCAGATAA CGCGGATCTGCCGGGTTTT CGAG AAAACGCGCCAGCTCCGCC CGCACGCGCTCGGCC TERM 5063 3761655 - 3761616 - G 84 -13.6 -2.68823 | opp_overlap 3761604 3761615, overlap 3761615 3761642 TGGCCGCCAGATAAC GCGGATCTGCCGGGTTTT CGAG AAAACGCGCCAGCTCCGC CCGCACGCGCTCGGC TERM 5064 3761662 - 3761642 - G 75 -6.7 -4.36914 | overlap 3761616 3761615 GGGTTTTCGAGAAAA CGCGCCAGC TCC GCCCGCACG CGCTCGGCCTGGGAC TERM 5065 3761776 - 3761758 - G 72 -5.8 -4.33621 | overlap 3761754 3761760 CATGTAATCAACAAA CGCCTGCG CCA CGCGGGGG TTAGCAAAAGAGGTA glpE 3762173 - 3761847 - | thiosulfate:cyanide sulfurtransferase (rhodanese) TERM 5066 3761889 - 3761877 - G 71 -9.1 -3.53224 | CACCTCTGCGGGAAA CTGGC GCT GCCAG GCTTCAAAACCGCCA TERM 5067 3762313 - 3762328 + H 70 -7.6 -3.95219 | opp_overlap 3762313 GATTCTTTGCTAATA TGTTCG ATAA CGAACA TTTATGAACTTTAAC glpD 3762363 - 3763868 + | sn-glycerol-3-phosphate dehydrogenase, aerobic, FAD/NAD(P)-binding TERM 5068 3763875 - 3763902 + T 100 -12.8 -3.81027 | gap 1, opp_overlap 3763872, overlap 3763876 GCGTCGTAAGGATGA T-GCCCGGTTGCG AAG TGCAACCGGGCTA TTTGAATTCCTTAGA TERM 5069 3763876 - 3763900 + T 100 -17.9 -3.48598 | opp_overlap 3763872, overlap 3763875 CGTCGTAAGGATGAT GCCCGGTTGCG AAG TGCAACCGGGC TATTTGAATTCCTTA ECS88_3816 3764527 - 3763922 - | hypothetical protein ECS88_3817 3765297 - 3764530 - | hypothetical protein ECS88_3818 3766010 - 3765300 - | hypothetical protein TERM 5070 3765629 - 3765660 + g 70 -4.5 -4.46073 | gap 1, overlap 3765633 CCCGCTCATCCGGGT TGAGCATCGCCGTA AATTG TACGGTGAAG-TCA TTTGTTGTGTTCAGA aufG 3767304 - 3766183 - | putative fimbrial-like adhesin protein AufG aufF 3768119 - 3767319 - | putative fimbrial chaperone AufF aufE 3768641 - 3768126 - | putative minor fimbrial subunit AufE aufD 3769158 - 3768586 - | putative minor fimbrial subunit AufD aufC 3771743 - 3769149 - | putative outer membrane export usher protein AufC TERM 5071 3771397 - 3771411 + g 84 -4.2 -5.1963 | opp_overlap 3771388 3771394, overlap 3771394 GATGAAGCCAAAGCC TGCTCT GGC AGCGCA TTTTTGTTAATTCCA TERM 5072 3771665 - 3771696 + g 70 -5.1 -4.3739 | opp_overlap 3771665 3771666 3771671, overlap 3771666 ATGCAGGCATAATAA CCAGAAGAAGCGG CACAAC CCGTTTCATCTGC TTTTGTGCCGCCATC aufB 3772559 - 3771780 - | putative fimbrial chaperone AufB TERM 5073 3772629 - 3772582 - R 91 -11.6 -3.75665 | opp_overlap 3772586 3772588 3772591, overlap 3772585 3772586 TCATACTCTATTAAA TAATTTCAATCTCAGGTTACAA CTTT TTGTAACCTGAAATCGTATTTA TATTTACTCGTACAG TERM 5074 3772626 - 3772585 - R 80 -8.9 -4.00756 | opp_overlap 3772586 3772588 3772591, overlap 3772582 3772586 TACTCTATTAAATAA TTTCAATCTCAGGTTACAA CTTT TTGTAACCTGAAATCGTAT TTATATTTACTCGTA TERM 5075 3772586 - 3772625 + r 79 -8 -4.37506 | opp_overlap 3772585 3772582 3772586, overlap 3772588 3772591 ACTCTATTAAATAAT TTCAATCTCAGGTTACAA CTTT TTGTAACCTGAAATCGTA TTTATATTTACTCGT TERM 5076 3772625 - 3772586 - R 83 -12.4 -2.99972 | opp_overlap 3772586 3772588 3772591, overlap 3772585 3772582 ACTCTATTAAATAAT TTCAATCTCAGGTTACAA CTTT TTGTAACCTGAAATCGTA TTTATATTTACTCGT TERM 5077 3772588 - 3772623 + r 85 -10.6 -3.78193 | opp_overlap 3772586 3772585 3772582, overlap 3772586 3772591 TCTATTAAATAATTT CAATCTCAGGTTACAA CTTT TTGTAACCTGAAATCG TATTTATATTTACTC TERM 5078 3772591 - 3772620 + r 75 -10.9 -2.96288 | opp_overlap 3772586 3772585 3772582, overlap 3772588 3772586 ATTAAATAATTTCAA TCTCAGGTTACAA CTTT TTGTAACCTGAAA TCGTATTTATATTTA aufA 3773337 - 3772633 - | Auf fimbriae major fimbrial subunit AufA TERM 5079 3773813 - 3773770 - R 80 -9 -4.0371 | opp_overlap 3773770 3773809 TATTGTGTATAGAAA TACCGTGAGTTCCACT CTGTATTACTTC AGCGGAACACACGGTA TTTAGCCGTATTTGA glgP 3776278 - 3773831 - | glycogen phosphorylase TERM 5080 3774070 - 3774049 - G 72 -10.1 -3.38316 | opp_overlap 3774048 TGATCAGCGAATCAA CCAGATCGC GATA GCGACCCGG ATCTTCCGGACTGAA TERM 5081 3775896 - 3775928 + g 81 -6.7 -4.72497 | opp_overlap 3775887, overlap 3775897 AAGCAAGCCGCCAGA CGGCCCAGGCCACCG TTA CCGAGGCCCGGGTCA TTTTCTTCATCAATC TERM 5082 3775897 - 3775927 + g 74 -10.2 -3.42775 | opp_overlap 3775887, overlap 3775896 AGCAAGCCGCCAGAC GGCCCAGGCCACCG TTA CCGAGGCCCGGGTC ATTTTCTTCATCAAT glgA 3777730 - 3776297 - | glycogen synthase TERM 5083 3776964 - 3776976 + g 82 -7.7 -4.46212 | opp_overlap 3776957 AACAGTAAGTCCGTC TCTGG ACT CCAGA TTTTCTCGTCCACGC glgC 3779025 - 3777730 - | glucose-1-phosphate adenylyltransferase TERM 5084 3778534 - 3778548 + g 95 -10 -4.60487 | opp_overlap 3778533 3778534 TGGCATACAAGCAAC GGTGCA ACG TGCACC TTTTTCGACGTGGTC glgX 3781016 - 3779043 - | glycogen debranching enzyme glgB 3783199 - 3781013 - | 1,4-alpha-glucan branching enzyme TERM 5085 3781590 - 3781600 + g 83 -5.4 -5.0538 | overlap 3781571 3781568 TCGCCCGGCATCCGG TCGA GAA TCGA TTTTTTACCGTGGAC TERM 5086 3782476 - 3782494 + g 91 -7.4 -5.09173 | CATAAATAGAGATTG GCGCATCA AAC TGATTCGC TTTTTTGCGCTCTTC TERM 5087 3782557 - 3782545 - G 72 -7.7 -3.91716 | opp_overlap 3782550, overlap 3782549 GCAGGCCGCAAATAA GAGAC GCG GTCTC CGGGCGCATTTGCGC asd 3784575 - 3783472 - | aspartate-semialdehyde dehydrogenase, NAD(P)-binding yhgN 3784767 - 3785360 + | putative antibiotic transporter TERM 5088 3785407 - 3785384 - T 71 -10.3 -2.78032 | overlap 3785383 GTTTTTCGAAAAGAG CCCGGTAGC GTCAGA ACTACCGGG TAAACAAACTTAACT gntU 3786757 - 3785417 - | gluconate transporter, low affinity GNT 1 system TERM 5089 3786732 - 3786704 - G 73 -3.9 -4.77036 | overlap 3786706 3786707 CTTCATGACTAAAAA CAGCAGCAG TAAAACAGACC CTACTGCTG TTAAAACAAGCGTTA gntK 3787288 - 3786761 - | gluconate kinase 2 ; gluconate transport, GNT I system TERM 5090 3787346 - 3787320 - R 77 -5.2 -5.01845 | opp_overlap 3787320 TACAAGAATTAAAAA TGTTACGGGTAA CTG TTATCGGTAACA TTGTCCAGCCGGACA gntR 3788422 - 3787427 - | DNA-binding transcriptional repressor TERM 5091 3788151 - 3788163 + g 76 -9.1 -3.75629 | opp_overlap 3788146 GTTTGATAACCGTGC GCGTC GGT GACGC TTTCGATTCCGCGTA TERM 5092 3788500 - 3788479 - R 81 -10.9 -3.42699 | opp_overlap 3788479 ACGGACGCATCAGAA CCTTCCCGA TTCC TCAGGAAGG TTTGTGAGATAAATT TERM 5093 3788479 - 3788500 + r 76 -8.7 -3.9009 | opp_overlap 3788479 ACGGACGCATCAGAA CCTTCCCGA TTCC TCAGGAAGG TTTGTGAGATAAATT yhhW 3789210 - 3788515 - | hypothetical protein TERM 5094 3788827 - 3788839 + g 81 -6.9 -4.63932 | opp_overlap 3788813 3788826 ACGCTGTTCATAACG CGGCG TAA TGCCG TTTTCTTCAGGCATG yhhX 3790370 - 3789333 - | putative oxidoreductase with NAD(P)-binding Rossmann-fold domain ECS88_3838 3790215 - 3790475 + | hypothetical protein TERM 5095 3790513 - 3790497 - fH 100 -9.4 -6.10489 | AAGGTCAAAAAAAAA GCCAGC ACCCG GCTGGC TAAGTAATACTGGAA yhhY 3790704 - 3791192 + | putative acetyltransferase TERM 5096 3791200 - 3791224 + F 72 -10.1 -2.90723 | TGAAGTAAGATAGTG CCCTTTTTCTG AGA TGGAAAAAGGG TGTCATTCAAAATCG TERM 5097 3792304 - 3792282 - f 73 -2.9 -5.08601 | gap 1, opp_overlap 3792287, overlap 3792284 3792287 GGAGTTTAATAAAAA TG-TAAGAAA AAAT TTTCTTATCA AACTTGCAAAAACCT yrhA 3792606 - 3793097 + | hypothetical protein yrhB 3793547 - 3793831 + | hypothetical protein TERM 5098 3793865 - 3793835 - T 80 -10.6 -3.28712 | gap 1, overlap 3793837 GGCTTGCCCTGACAA TA-CGGCCCTCTT CCCACT AAGAGGGCCGCTA ACCTTAATACCCCGC TERM 5099 3793862 - 3793837 - T 95 -14.8 -3.21276 | overlap 3793835 CTTGCCCTGACAATA CGGCCCTCTT CCCACT AAGAGGGCCG CTAACCTTAATACCC ggt 3795602 - 3793869 - | gamma-glutamyltranspeptidase TERM 5100 3795117 - 3795129 + g 71 -9.1 -3.51934 | opp_overlap 3795117, overlap 3795115 CACCACTTTATTCAA CGGCA TGG TGCCG TATTTATCCAGCGCC TERM 5101 3795576 - 3795593 + g 90 -9.1 -4.51699 | AGCAGCAATGGCCAC CCGGCGT AAAA ACGTCGG TTTTATCATCGTTAT TERM 5102 3795744 - 3795757 + G 72 -8.1 -3.95219 | overlap 3795754 GACTTCTGCTTTTGA CGGCA CTCC TGCCG TTTGTCGGCTTTGCA TERM 5103 3796129 - 3796096 - g 81 -9.5 -4.0162 | GCCGGAGAGGAGAAA CGGCGACATGCTGAA TCAG CCCAGCACGCCGCAG CCTGACATTCCGTTG yhhA 3795722 - 3796162 + | hypothetical protein ugpQ 3796892 - 3796149 - | glycerophosphodiester phosphodiesterase, cytosolic TERM 5104 3796210 - 3796241 + g 95 -12.2 -4.17556 | gap 1, opp_overlap 3796208 3796204 CAGATGCAATCCACG CCCCAGCGCAGCAAC TCT GCCGC-GCGCTGGGG TTTATTGACGGTATA ugpC 3797959 - 3796889 - | glycerol-3-phosphate transporter subunit ; ATP-binding component of ABC superfamily ugpE 3798806 - 3797961 - | glycerol-3-phosphate transporter subunit ; membrane component of ABC superfamily TERM 5105 3798264 - 3798250 - G 70 -3.5 -4.65263 | overlap 3798237 3798252 ATGTCGCAAAAGAAA CGCAT TGGCG ACGCG CCGTCGATCCGCGCG ugpA 3799690 - 3798803 - | glycerol-3-phosphate transporter subunit ; membrane component of ABC superfamily ugpB 3801104 - 3799788 - | glycerol-3-phosphate transporter subunit ; periplasmic-binding component of ABC superfamily TERM 5106 3800186 - 3800199 + g 72 -5.9 -4.38154 | opp_overlap 3800179, overlap 3800197 CCCATAGACTGGCTC CGCCG ATAA TGGCG TTTTGTGGCGCATCT TERM 5107 3801132 - 3801145 + r 71 -5.2 -4.46212 | opp_overlap 3801130 3801142, overlap 3801131 TTGTTGTACCGAATG CGCG AATTCA CGCG TTTTATGCTCGCGGA TERM 5108 3801482 - 3801467 - R 73 -9 -3.53811 | opp_overlap 3801459 3801461 3801467 GTCACCTGTCTCAAA GGAGTC TTTT GACTCC TTATCAATCAACGTG TERM 5109 3801467 - 3801482 + r 71 -9 -3.35996 | opp_overlap 3801467, overlap 3801459 3801461 GTCACCTGTCTCAAA GGAGTC TTTT GACTCC TTATCAATCAACGTG livF 3802214 - 3801501 - | leucine/isoleucine/valine transporter subunit ; ATP-binding component of ABC superfamily TERM 5110 3801767 - 3801745 - G 70 -4.7 -4.51994 | TCAAGCAACAACAAA CGCGGGTTG CTCAT CAGCGCGCG ACCAATCGCCAGCAT livG 3802983 - 3802216 - | leucine/isoleucine/valine transporter subunit ; ATP-binding component of ABC superfamily livM 3804257 - 3802980 - | leucine/isoleucine/valine transporter subunit ; membrane component of ABC superfamily livH 3805180 - 3804254 - | leucine/isoleucine/valine transporter subunit ; membrane component of ABC superfamily TERM 5111 3805061 - 3805045 - G 79 -10.1 -3.71527 | opp_overlap 3805045 TGCCAATCATGTAAA CCTCGCC GTG GGCGAAG TTGATCATGCCGATA livK 3806337 - 3805228 - | leucine transporter subunit ; periplasmic-binding component of ABC superfamily TERM 5112 3805473 - 3805495 + g 74 -8.4 -3.90318 | overlap 3805474 CTTTCTTGTCGGCTT TCAGCGCATC AAC GATGCCCTGG TTTGTCGGATCCTGG TERM 5113 3806705 - 3806695 - H 81 -3.2 -5.43514 | AAAAGAATTAAAAAA GAGA AAG CCTC CGATTAAATTATTTC yhhK 3806761 - 3807144 + | hypothetical protein TERM 5114 3807305 - 3807323 + T 70 -10.3 -2.5785 | opp_overlap 3807296 3807300, overlap 3807304 ATATTAGCAATTTGG CGGCAAC CCAAA GTTGCCG ATTAATGATTACTTC livJ 3808435 - 3807332 - | leucine/isoleucine/valine transporter subunit ; periplasmic-binding component of ABC superfamily TERM 5115 3808163 - 3808174 + g 70 -5.8 -4.15044 | CACGTATTTAATGCC GTCG TTAA CGAC TTTGTTCGCCACCGC ECS88_3858 3809370 - 3809771 + | putative component of a paralog of phosphotransferase system, mannose/fructose-specific component IIA ECS88_3859 3809778 - 3810263 + | putative component of a paralog of phosphotransferase system, mannose/fructose-specific component IIA TERM 5116 3810262 - 3810251 - f 76 -3 -5.27769 | overlap 3810258 ACAAAAAATCAAAAA TAAG TTAC CTTA ATTAAGGAGAGGAGC ECS88_3860 3810280 - 3811026 + | putative phosphotransferase system enzyme IIC ECS88_3861 3810947 - 3811873 + | putative phosphotransferase system enzyme IID ECS88_3862 3811845 - 3812795 + | putative Phosphoglycerate dehydrogenase TERM 5117 3813280 - 3813268 - g 81 -6.3 -4.80882 | AGCCGATATCAAAAA TATCG TAG CGATA AAAGACAGTAGCGGT ECS88_3863 3812795 - 3813679 + | putative paralog of dihydrodipicolinate synthase TERM 5118 3813752 - 3813731 - T 100 -10.1 -5.28942 | opp_overlap 3813731 TAGCGTAAACAAAAA CCCCCGGAC TCAA ATCCAGGGG TTATCTGTGGCAACT rpoH 3814637 - 3813783 - | RNA polymerase, sigma 32 (sigma H) factor ftsX 3815940 - 3814882 - | transporter subunit: membrane component of ABC superfamily ftsE 3816601 - 3815933 - | transporter subunit: ATP-binding component of ABC superfamily ftsY 3818100 - 3816604 - | fused Signal Recognition Particle (SRP) receptor: membrane binding protein ; conserved hypothetical protein TERM 5119 3817026 - 3817016 - G 72 -8.2 -3.83921 | opp_overlap 3817011 TCGAAGATAACAGAA GCGG AAT CCGC ACCGGTATGCTGGGC TERM 5120 3818272 - 3818259 - gH 87 -4.5 -5.1861 | TTTATCATGAAAAAA CCGAA TCAT TCCGG CAGCGGCCAAATCCG yhhF 3818250 - 3818846 + | putative methyltransferase TERM 5121 3819024 - 3819060 + GT 75 -8.9 -3.62572 | gap 1, opp_overlap 3819007 3819023, overlap 3819027 TGGCCCGCAGATGAC CACCGCCGAAAAGG TGCGGATTTT CCTTTTCGGCG-TG TTTGAACTGCTGGTC TERM 5122 3819027 - 3819058 + GT 85 -11.7 -3.39018 | opp_overlap 3819023, overlap 3819024 CCCGCAGATGACCAC CGCCGAAAAGG TGCGGATTTT CCTTTTCGGCG TGTTTGAACTGCTGG ECS88_3869 3818713 - 3819105 + | hypothetical protein yhhM 3819467 - 3819108 - | hypothetical protein TERM 5123 3819839 - 3819853 + G 71 -3.4 -4.8048 | overlap 3819840 3819841 CGTCAACGTCTGATG TACGCC ATC GGCGCG TTTTTCCTCTCGCAC yhhN 3819608 - 3820234 + | conserved hypothetical protein; putative inner membrane protein TERM 5124 3820245 - 3820264 + F 81 -12.2 -3.01984 | opp_overlap 3820241 3820240 TCTGATAAAACTTGA CTCTGGAG TCGA CTCCAGAG TGTATCCTTCGGTTA TERM 5125 3821041 - 3821020 - g 83 -10.1 -4.13654 | CGCTGAAACCAGAAA CCGCCACGC GCCT GCGTAACGG TGAGCGTGAAGAGGT zntA 3820308 - 3822506 + | zinc, cobalt and lead efflux system TERM 5126 3822616 - 3822598 - T 81 -11 -3.4252 | opp_overlap 3822589 3822588 TCGTAGGCATGATAA GACGCGAC AGC GTCGCATC AGGCATTGTGCACCG tusA 3823020 - 3822775 - | sulfurtransferase TERM 5127 3823693 - 3823711 + G 70 -6.6 -4.0342 | overlap 3823694 CACACTGTTCGGTAA CGTCAGCG ACA CGCTGGCC TTCTTCTTCATTGCC yhhQ 3823241 - 3823906 + | conserved hypothetical protein; putative inner membrane protein dcrB 3823979 - 3824536 + | periplasmic protein TERM 5128 3824554 - 3824581 + T 100 -10.5 -5.52384 | opp_overlap 3824549, overlap 3824548 TTTAAGATGATGAGG CGGCCTCAGGT ATTTCC ACCGGGGGCCG TTTTTTTAATCGCCA yhhS 3825757 - 3824540 - | putative transporter TERM 5129 3826301 - 3826285 - g 75 -5.1 -4.60041 | opp_overlap 3826299 ATGGACTCGGAAAAA GTGGTTA CCT TCACCAC GGCGCTAATGACCGG yhhT 3825889 - 3826938 + | conserved hypothetical protein; putative inner membrane protein TERM 5130 3827218 - 3827186 - g 82 -11.3 -3.53224 | opp_overlap 3827176, overlap 3827207 CATTCGCGCCGGAAA CGCCGCTATGGTTCA ACT TAAGCCATAGCGGTG ACGATATCGCCCTGC acpT 3826993 - 3827580 + | holo-(acyl carrier protein) synthase 2 TERM 5131 3827626 - 3827653 + F 70 -7.1 -3.91984 | opp_overlap 3827618 3827616 CAGAACAGGTAATCA GTATGACGAAT ACTTAA AATCGTCATAC TTATTTCCGCCATCT TERM 5132 3828353 - 3828335 - g 81 -6 -4.7497 | GCCAGCGATTAAAAA GATCACCT TTA ACGTGATC CCGGACCCGACTACC nikA 3827691 - 3829265 + | nickel transporter subunit ; periplasmic-binding component of ABC superfamily TERM 5133 3829311 - 3829331 + G 100 -7.5 -5.55664 | overlap 3829314 TGCTGATCCCGATGG TGCTCGCCG CCT CGGTGATCA TTTTTTTGATGCTGC nikB 3829265 - 3830209 + | nickel transporter subunit ; membrane component of ABC superfamily nikC 3830206 - 3831039 + | nickel transporter subunit ; membrane component of ABC superfamily nikD 3831039 - 3831803 + | nickel transporter subunit ; ATP-binding component of ABC superfamily nikE 3831800 - 3832606 + | nickel transporter subunit ; ATP-binding component of ABC superfamily nikR 3832612 - 3833013 + | DNA-binding transcriptional repressor, Ni-binding ECS88_3885 3833203 - 3833958 + | putative transcriptional regulator ECS88_3886 3833983 - 3834456 + | putative phosphotransferase system enzyme subunit IIA ECS88_3887 3834453 - 3834734 + | putative phosphotransferase system enzyme IIB ECS88_3888 3834781 - 3836169 + | putative phosphotransferase system permease component IIC ECS88_3889 3836162 - 3837670 + | putative carbohydrate kinase ECS88_3890 3837660 - 3837929 + | putative phosphocarrier HPr protein of a carbohydrate phosphotransferase system ECS88_3891 3837961 - 3838812 + | putative aldolase TERM 5134 3838915 - 3838874 - T 79 -8.1 -4.32607 | gap 1 CTAAAATTCAATAAA TTGCACCAATGCGTAGACCC TAT AAGCTTACGCATCGG-GCAA CTGTAATTACGCCAT yhhJ 3840046 - 3838922 - | putative transporter subunit: membrane component of ABC superfamily TERM 5135 3839266 - 3839250 - G 90 -10.1 -4.41348 | GTGGTGGCAAACAAA CTGAGCG CCA CGCCCAG CATAAACAGCGGGAT rbbA 3842781 - 3840046 - | fused ribosome-associated ATPase: ATP-binding protein ; ATP-binding protein ; putative membrane protein TERM 5136 3842469 - 3842450 - G 71 -2.1 -5.00884 | AGGCGGGCGAAAAAA TCGACGT TTTCAT ACACCGA CAAGGTGTGGTAGAG yhiI 3843845 - 3842778 - | putative HlyD family secretion protein TERM 5137 3842849 - 3842860 + g 72 -7.2 -4.1964 | GCACCCACGCTACGC CCGG CAAT CCGG TTTTGACATATTCCA TERM 5138 3843547 - 3843557 + g 72 -6.8 -4.15396 | overlap 3843511 TGCGCGGCGGCAACG GCAC TTT GTGC TTCTTTGATTTGCGC TERM 5139 3844999 - 3844989 - g 72 -4.6 -4.59773 | GTTGATCCCCAAAAA CGCC TCG GGCA GTAAGAGTGACGGTA yhiM 3844579 - 3845631 + | conserved hypothetical protein; putative inner membrane protein TERM 5140 3845643 - 3845671 + T 100 -14.7 -4.68103 | opp_overlap 3845640 3845651, overlap 3845644 ATAATAAAAAAGGCT TCAGATAAGGCGT TGA GCGCCTTATCTGG TTTTATTCAGGTTAA TERM 5141 3845644 - 3845670 + T 100 -16 -3.40139 | opp_overlap 3845640 3845651, overlap 3845643 TAATAAAAAAGGCTT CAGATAAGGCGT TGA GCGCCTTATCTG GTTTTATTCAGGTTA yhiN 3846911 - 3845718 - | putative oxidoreductase with FAD/NAD(P)-binding domain TERM 5142 3847762 - 3847743 - g 70 -4.2 -4.65933 | overlap 3847739 GAGCGTGAAAAGAAA GACGGC AAGAAAAA GCCGCC GTTCTGGACGCGTAT pitA 3847143 - 3848642 + | phosphate transporter, low-affinity TERM 5143 3848684 - 3848659 - T 70 -8.9 -3.16647 | opp_overlap 3848661, overlap 3848658 3848661 CGTACGCACCAAAAC GAGCGGGTCAG TTTA CTGGCCCGCTT TTTTTATGCGTCATT TERM 5144 3848661 - 3848682 + T 100 -13.7 -5.64274 | opp_overlap 3848659 3848658 3848661 TACGCACCAAAACGA GCGGGTCAG TTTA CTGGCCCGC TTTTTTTATGCGTCA TERM 5145 3848682 - 3848661 - T 81 -11.5 -3.14218 | opp_overlap 3848661, overlap 3848659 3848658 TACGCACCAAAACGA GCGGGTCAG TTTA CTGGCCCGC TTTTTTTATGCGTCA yhiO 3849048 - 3848713 - | putative universal stress (ethanol tolerance) protein B uspA 3849439 - 3849873 + | universal stress global response regulator TERM 5146 3849900 - 3849917 + F 100 -14.1 -4.77757 | CGACGTGTTCCTGAA CGCCCGC ATAT GCGGGCG TTTTGCTTTTTGGCG TERM 5147 3851256 - 3851266 + G 70 -4.6 -4.58395 | TCGGCATGTTTATGT GCTC ACT GGGC TTTTTGACGGCTGCA yhiP 3850190 - 3851659 + | transporter TERM 5148 3851675 - 3851700 + T 100 -20.5 -4.19735 | opp_overlap 3851675 TTATTCTTGCAGAAA GCGGGGTAGCG TTAT CGCTACCCCGC TTTACTTTTACACCG TERM 5149 3851700 - 3851675 - T 100 -20.5 -3.86346 | opp_overlap 3851675 TTATTCTTGCAGAAA GCGGGGTAGCG TTAT CGCTACCCCGC TTTACTTTTACACCG yhiQ 3852460 - 3851708 - | putative SAM-dependent methyltransferase TERM 5150 3852414 - 3852435 + g 88 -11.5 -3.794 | opp_overlap 3852416, overlap 3852416 GCCGCCAGAACAGAT AAGGCGCCG TCTC CGGCGCCTG TTTCATCAATTAAGC TERM 5151 3852433 - 3852416 - G 100 -14.1 -3.72788 | opp_overlap 3852414 3852416 CGCCAGAACAGATAA GGCGCCG TCTC CGGCGCC TGTTTCATCAATTAA TERM 5152 3852416 - 3852433 + g 95 -14.1 -3.48105 | opp_overlap 3852416, overlap 3852414 CGCCAGAACAGATAA GGCGCCG TCTC CGGCGCC TGTTTCATCAATTAA prlC 3854510 - 3852468 - | oligopeptidase A TERM 5153 3852552 - 3852574 + g 74 -10.6 -3.21276 | opp_overlap 3852539, overlap 3852551 CAGCTCCATCGGCTC TTCTGAACCG CCA CGGCTCAGAA TGTTGTCGAGGAACG TERM 5154 3853631 - 3853641 + g 70 -4.6 -4.46581 | opp_overlap 3853625, overlap 3853625 TTAAGAAATCCAGCA CCTG CTG CGGG TTTTCTGCCATTTTA TERM 5155 3854113 - 3854126 + g 79 -2.3 -5.24531 | overlap 3854105 TCGAAGTCGCGCAGT GCGTT ATCA ACCGC TTTTTTCTGCGCCGT TERM 5156 3854666 - 3854685 + H 75 -4.8 -4.8622 | overlap 3854667 CTGATAGGCTTTTGT GCGCCCCG AATA CGGGCCGA TTTTTACTTACCGGA TERM 5157 3854667 - 3854684 + H 71 -8.3 -3.5125 | overlap 3854666 TGATAGGCTTTTGTG CGCCCCG AATA CGGGCCG ATTTTTACTTACCGG TERM 5158 3855154 - 3855136 - g 70 -4.4 -4.56597 | opp_overlap 3855126 GCGCGCGTCGAAAAA GCCGACGG TTT CCAGCAGC TTAAGGCCAAGCTGC TERM 5159 3855238 - 3855224 - g 75 -5.6 -4.58773 | CGTATGAAATGAAAA CCGACT ATC AGGCGG TGGTCAGCGGGATAG yhiR 3854713 - 3855555 + | putative DNA (exogenous) processing protein gor 3855627 - 3856979 + | glutathione oxidoreductase TERM 5160 3856988 - 3857014 + TF 100 -16 -3.11732 | opp_overlap 3856988, overlap 3856981 GCGTTAAATGTTAAA GGGCTAAGAGTA GTG TGCTCTTAGCCC TTAGCTACGTTTCCG TERM 5161 3857014 - 3856988 - Tf 100 -13.8 -3.71649 | opp_overlap 3856988 3856981 GCGTTAAATGTTAAA GGGCTAAGAGTA GTG TGCTCTTAGCCC TTAGCTACGTTTCCG ECS88_3906 3857182 - 3857033 - | hypothetical protein ECS88_3907 3857138 - 3857317 + | hypothetical protein TERM 5162 3857438 - 3857479 + FH 82 -12.6 -2.7185 | gap 1, opp_overlap 3857443 3857452, overlap 3857452 CACCAACTCAGGGCT GAACAGTAAAAAAACCGAC GCGAA GTCGGTTTTTTTAC-GTCC TGATTCAGACCTCCT TERM 5163 3857475 - 3857443 - fH 100 -16.6 -3.03243 | opp_overlap 3857438 3857452, overlap 3857452 ACTCAGGGCTGAACA GTAAAAAAACCGAC GCGAA GTCGGTTTTTTTAC GTCCTGATTCAGACC TERM 5164 3857452 - 3857466 + FH 100 -7.1 -5.48825 | opp_overlap 3857443 3857452, overlap 3857438 TGAACAGTAAAAAAA CCGAC GCGAA GTCGG TTTTTTTACGTCCTG TERM 5165 3857466 - 3857452 - fH 100 -7.1 -5.63374 | opp_overlap 3857452 3857438, overlap 3857443 TGAACAGTAAAAAAA CCGAC GCGAA GTCGG TTTTTTTACGTCCTG TERM 5166 3858024 - 3858013 - g 70 -3.6 -4.61231 | CCAGATGCGCAAAAA GGCG CGTT CACC AAGGAAGATGGCGAG arsC 3857650 - 3858075 + | arsenate reductase TERM 5167 3858130 - 3858144 + F 70 -5.6 -4.37886 | TTTATTTATGTCGGA TGCGAC GCT GGCGCA TTTTATCCGACCTAC slp 3859259 - 3859825 + | outer membrane lipoprotein TERM 5168 3859865 - 3859837 - f 80 -10.4 -3.72009 | opp_overlap 3859836 3859860, overlap 3859829 ATAACACCACCGAAA GATGCAGATGCT TTCTC AGTATCTGCATC ATGCATTACATCAAA yhiF 3859978 - 3860508 + | putative DNA-binding transcriptional regulator TERM 5169 3860550 - 3860527 - T 84 -8.8 -4.34866 | ATTGAACAATATAAA GAGGCCCAGC AACA GCCAGACCTC CCGTTAATTATACGT chuS 3861593 - 3860565 - | Heme oxygenase TERM 5170 3861239 - 3861249 + g 86 -6.8 -4.97158 | opp_overlap 3861226, overlap 3861242 TACTCTGGCGTTCGC CACG AGC CGTG TTTTCTTTGATGTGG TERM 5171 3861636 - 3861617 - R 100 -13.6 -4.03234 | opp_overlap 3861615 TTCCTTCCAGATAAA TGCCCCGA AATA TCGGGGCA GATGATTACCATTGA chuA 3863624 - 3861642 - | outer membrane hemin receptor chuT 3864230 - 3865222 + | putative periplasmic binding protein ECS88_3915 3865242 - 3866579 + | putative oxygen independent coproporphyrinogen III oxidase (chuW-like) ECS88_3916 3866592 - 3867086 + | conserved hypothetical protein (chuX protein) TERM 5172 3867412 - 3867427 + G 75 -4.6 -4.82901 | GACCTCTTTGGGATG CGGCGA TAGC TGGCCG TTTTTATCAGAGCGG TERM 5173 3867508 - 3867492 - g 78 -10.9 -3.5394 | opp_overlap 3867492, overlap 3867481 AAACGCTGGCGGAAA GCTGGTT GCA AACCAGC CAGCTTGATTATGCC TERM 5174 3867492 - 3867512 + G 71 -9 -3.45832 | opp_overlap 3867492 3867481 AAACGCTGGCGGAAA GCTGGTTG CAAAC CAGCCAGC TTGATTATGCCATTC ECS88_3917 3867086 - 3867709 + | conserved hypothetical protein (chuY) TERM 5175 3867715 - 3867735 + F 93 -15.4 -2.66316 | opp_overlap 3867701 3867702, overlap 3867712 ACCGGCGTGATCCCC CGGCGCGG CATGT CCGCGCCG TAATGTCGTAACGGA chuU 3867758 - 3868750 + | putative hemin transport system permease chuV 3868594 - 3869517 + | putative hemin ABC-type transport system ATP-binding protein TERM 5176 3869551 - 3869520 - T 79 -8.1 -4.30576 | gap 1, overlap 3869524 CCTCGATCATTAAAA CCAACAGGAGTACC GCACT GGTACTCCTGC-GA ATAAATAACTATACA TERM 5177 3869548 - 3869524 - T 100 -14.4 -3.72743 | overlap 3869520 GATCATTAAAACCAA CAGGAGTACC GCACT GGTACTCCTG CGAATAAATAACTAT yhiD 3870216 - 3869569 - | putative Mg(2+) transport ATPase inner membrane protein TERM 5178 3870232 - 3870262 + r 100 -12.6 -4.93968 | opp_overlap 3870232 ATAAAAATGCAAAAA GGAGCAGCAAGATG GCT CAACTTGCTACTCC TTTTTACTTGTACCT TERM 5179 3870262 - 3870232 - R 100 -14.8 -4.93595 | opp_overlap 3870232 ATAAAAATGCAAAAA GGAGCAGCAAGATG GCT CAACTTGCTACTCC TTTTTACTTGTACCT hdeB 3870606 - 3870280 - | acid-resistance protein hdeA 3871054 - 3870722 - | stress response protein acid-resistance protein hdeD 3871309 - 3871881 + | acid-resistance membrane protein TERM 5180 3871898 - 3871932 + F 100 -20.3 -3.28003 | opp_overlap 3871908 TATCCCTATTTCCAC CTGGATCATAGTCAC ATTAA GTGACTATGATCCAG TTAATACTCTCTTAG TERM 5181 3872327 - 3872307 - f 100 -14.1 -4.65263 | ATGCGTTAAAAGAAA GCTGGCAAT CCA ATTGCCAGC CTAAGTCGAAACAAG gadE 3872680 - 3873207 + | DNA-binding transcriptional activator TERM 5182 3873370 - 3873388 + F 100 -3.1 -6.02345 | opp_overlap 3873370, overlap 3873347 CATGCTGGCAGAAAC TGTTGGC AGAAC GGCAACA TTTTTTTTGTCGTTG TERM 5183 3873899 - 3873861 - g 71 -9.6 -3.55622 | gap 1 CTGAACTCCGCCAAA GGC-TCGCTGGCGAAAG CGCTCT CTACCGCCAGCAATGCC CGCATCACCTTTAAC mdtE 3873546 - 3874703 + | multidrug resistance efflux transporter mdtF 3874728 - 3877841 + | multidrug transporter, RpoS-dependent TERM 5184 3877853 - 3877886 + T 100 -14.8 -3.78953 | opp_overlap 3877850 3877853 3877855 GTAACGTGTAAATGA GAGTAAGGTTGAAC GTGAGG GTTCAGCCTTACTC TTTCCTGCTAACCAT TERM 5185 3877886 - 3877853 - T 82 -12.6 -2.92667 | opp_overlap 3877853, overlap 3877850 3877855 GTAACGTGTAAATGA GAGTAAGGTTGAAC GTGAGG GTTCAGCCTTACTC TTTCCTGCTAACCAT TERM 5186 3877884 - 3877855 - T 71 -9.4 -3.01269 | opp_overlap 3877853, overlap 3877853 3877850 AACGTGTAAATGAGA GTAAGGTTGAAC GTGAGG GTTCAGCCTTAC TCTTTCCTGCTAACC TERM 5187 3878132 - 3878119 - T 71 -9.5 -3.00128 | overlap 3878116 TACGAAAGAGAACTA GCCGG TAGC CCGGC AGAAATCATCAGGAA gadW 3878932 - 3878204 - | DNA-binding transcriptional activator TERM 5188 3878848 - 3878865 + g 82 -2.7 -5.28683 | overlap 3878850 CCAGCAGCAGGATAC TCTCGTT ATGC AACGATA TTTTTTGCTGTTCAT TERM 5189 3879026 - 3879040 + r 77 -7.2 -4.37092 | opp_overlap 3879018 GCAAAAACTGCCATA TTTGGT AGG ACCAAA TTTTATCCACAAAGT TERM 5190 3879258 - 3879276 + r 100 -5.2 -6.06529 | GCAGACTATCCTCTT CCCGGT CCCCTAT GCCGGG TTTTTTTTATGTCTG gadX 3880125 - 3879301 - | DNA-binding transcriptional dual regulator TERM 5191 3880437 - 3880473 + r 87 -8.8 -4.58663 | gap 1, opp_overlap 3880436 3880444 GCAATTAATAAGTAG CCGAATACCC-ACCTGT TTTT AAAGGTTGGGCATTCGG TTTTTACAACGTGAT gadA 3881893 - 3880493 - | glutamate decarboxylase A, PLP-dependent TERM 5192 3882094 - 3882069 - R 100 -14.1 -5.08601 | opp_overlap 3882065 TTATCGTAATAAAAA TCGCCCAAACA CTCC TGTTCGGGCGA TCAAATTAATTATTG yhjA 3883501 - 3882104 - | cytochrome C peroxidase (cpp-like) TERM 5193 3882623 - 3882646 + g 70 -3.8 -4.62471 | gap 1, overlap 3882626 CGGATAGACTTCGAG GAACTGC-GCT TTA AGCTGCGGATC TTTTTCCAGCTTAGC TERM 5194 3885110 - 3885099 - g 72 -5.8 -4.30576 | CTGGGATGATGAAAA CGGT ATCT ACCG CGATTACGACTGGCG TERM 5195 3885513 - 3885527 + G 74 -7.8 -4.06001 | opp_overlap 3885513, overlap 3885515 3885518 GTTTGGCTGGACTAA CGGTGT GGT ACGCCG TTTAATTGGTTTGTA treF 3883906 - 3885555 + | cytoplasmic trehalase TERM 5196 3885599 - 3885556 - T 85 -11.2 -3.51329 | opp_overlap 3885559 3885598, overlap 3885559 TACGGCGAACCATAA TATTTTTACAGCCAGCCG CTAACTTC CTGCTGGCTGTAAAATTA TCCTCTTCAGGAGGA TERM 5197 3885596 - 3885559 - T 84 -12.9 -2.59447 | opp_overlap 3885559, overlap 3885556 GGCGAACCATAATAT TTTTACAGCCAGCCG CTAACTTC CTGCTGGCTGTAAAA TTATCCTCTTCAGGA TERM 5198 3885559 - 3885596 + T 100 -12.9 -3.52073 | opp_overlap 3885559 3885556 GGCGAACCATAATAT TTTTACAGCCAGCCG CTAACTTC CTGCTGGCTGTAAAA TTATCCTCTTCAGGA yhjB 3886208 - 3885606 - | putative DNA-binding response regulator in two-component regulatory system TERM 5199 3886764 - 3886798 + G 72 -4.8 -4.62772 | opp_overlap 3886764 3886765, overlap 3886765 3886766 CAGTTGTTCATCAAA GTCGCGGAGCTGGAAA GTT TTTCCCGCGCGGCGGA TTTCTTTGCTTTGCC yhjC 3886656 - 3887627 + | putative DNA-binding transcriptional regulator yhjD 3887676 - 3888689 + | conserved hypothetical protein; putative inner membrane protein TERM 5200 3888738 - 3888769 + F 85 -13 -2.78596 | opp_overlap 3888747 3888749 CCTGGCTCCCCGTAG GCCGGATAAGATGC GCCA GCATCGCATCCGGC TATAATGCGCACATA TERM 5201 3889163 - 3889183 + G 79 -9.7 -3.73106 | GTCCTTGTCGCCTCT CTCATTGGC ACG GCCATTGAG TTCTTCGACTTTTAC TERM 5202 3889318 - 3889328 + G 75 -4.6 -4.86773 | CGTCGCGCGCCCCAT TGGC TCT GCCG TTTTTGGTCATTTTG TERM 5203 3889673 - 3889684 + G 70 -5.8 -4.27117 | TTTATGAGCTGGGGC TGGC GTGT GCCA TTTATCTTCTCGGCG TERM 5204 3890092 - 3890125 + G 71 -3.2 -4.73614 | gap 1, overlap 3890092 3890093 CCTGTTTGCCTTTAA C-CCACTGTTGGGTT CTGGT AATCCAGCATTGGTG TTTGTTTTCCTGCTG yhjE 3889082 - 3890404 + | putative transporter TERM 5205 3890413 - 3890439 + T 70 -9.4 -2.84619 | overlap 3890404 GTTGTAGTCGTTTTA ACTGCCGGATGT CAG ACATCCGGCAAC TATCATCACTTCTTC TERM 5206 3890519 - 3890468 - T 88 -8.9 -4.4767 | overlap 3890510 TCATCTACGACAAAA TTGTCCGGCACTGAT-TAGCCTCCC CTTC GGAAGGTGAGATCAGTGCCAG-CAA TGCTGCCGCTGGCGT yhjG 3892520 - 3890457 - | putative outer membrane biogenesis protein TERM 5207 3890565 - 3890520 - G 74 -11.1 -3.15861 | gap 1, overlap 3890510 3890540 3890563 GATCAGTGCCAGCAA TGCTGCCGCTGGCGTAACCAGC GTT GCCAGTGCCGCC-GCAACAGCA CCACGGGCAATCAAC TERM 5208 3892445 - 3892423 - G 72 -7 -4.1899 | overlap 3892436 CGATTCCAGTCAAAA GTTGCAATCA AAA TGATCGCCAC GACAATCAACAACAA yhjH 3893342 - 3892575 - | EAL domain containing protein involved in flagellar function ECS88_3939 3893296 - 3893490 + | hypothetical protein TERM 5209 3894352 - 3894339 - g 82 -3.1 -5.27335 | CTGCCGAAAGAAAAA GTGAT CGAT ACCAC CGCAGCTGGCGACTC kdgK 3893574 - 3894503 + | ketodeoxygluconokinase TERM 5210 3894552 - 3894521 - T 93 -11.6 -4.24948 | overlap 3894522 GCAGCATATGCAAAA GGCTGGATAGAGTG TTAC CCCTCTATCCAGCT CATCCATAAATACCT TERM 5211 3894551 - 3894522 - T 95 -15.1 -3.14487 | overlap 3894521 CAGCATATGCAAAAG GCTGGATAGAGTG TTAC CCCTCTATCCAGC TCATCCATAAATACC yhjJ 3896095 - 3894599 - | putative zinc-dependent peptidase TERM 5212 3896148 - 3896131 - R 91 -6.9 -5.4505 | CCTGGTAATAAAAAA CTGCCCG TTGT CGGTCAG TCTAAATGACGTTAA TERM 5213 3896249 - 3896221 - R 100 -14 -4.52669 | opp_overlap 3896228 AAGAAGTGAAATAAA CCTGAACTCACC CAGGT GGTAAGTTCAGG CACAGGGGTCAATTA TERM 5214 3896302 - 3896273 - R 75 -9.3 -3.59315 | overlap 3896275 TCAATTATGCGCAAA CACCCGCACTC GGGGAAGG GAGTGCGGGCA TAAGTGGTGAGATTA TERM 5215 3896300 - 3896275 - R 85 -11.9 -3.37259 | overlap 3896273 AATTATGCGCAAACA CCCGCACTC GGGGAAGG GAGTGCGGG CATAAGTGGTGAGAT dctA 3897601 - 3896315 - | C4-dicarboxylic acid, orotate and citrate transporter TERM 5216 3897379 - 3897367 - G 74 -7.7 -4.08317 | opp_overlap 3897378 CAATTTCAAAGTAAA GCAGT GCG ACTGC GCCGGTACGACCGAC TERM 5217 3897746 - 3897725 - R 73 -4.4 -4.7657 | opp_overlap 3897729 3897731 CAAAAAGGTTAAAAA GTTTGAGC TGGCTC GCACAAAC CAGCACTTTTTAAAG yhjK 3899733 - 3897784 - | putative diguanylate cyclase bcsC 3903327 - 3899854 - | cellulose synthase subunit TERM 5218 3901998 - 3902019 + g 75 -4.4 -4.83615 | gap 1, opp_overlap 3901998, overlap 3901998 3901999 GCTGGCTGGCAGAGA G-CGAGGCG ATATA CGCTTCGGC TTTTTCTGGCGACTG TERM 5219 3902803 - 3902814 + g 70 -5.8 -4.24294 | ATTGCCCGGCGTATC CGCA TTAA TGCG TTTTAGCTGATTAAT TERM 5220 3903064 - 3903078 + g 71 -2.8 -4.83615 | CGGCGCTAACTGCGA CAGC CGATCGA GCTG TTTTTGTGCGCCATC bcsZ 3904415 - 3903309 - | endo-1,4-D-glucanase TERM 5221 3903474 - 3903486 + g 75 -6.9 -4.36914 | opp_overlap 3903448, overlap 3903451 3903455 CTGGCGCTGAACGGC CTGCG CAT CGCGG TTTTGTAAAAAGGGC bcsB 3906761 - 3904422 - | regulator of cellulose synthase, cyclic di-GMP binding TERM 5222 3905403 - 3905423 + g 84 -11.1 -3.79519 | opp_overlap 3905390 TACCGGAATCCGCAG CAGCAGGCG GTT CGCCTCCTG TTTGCTGCTCAGGTT TERM 5223 3906911 - 3906875 - R 72 -10.3 -2.84173 | gap 1, overlap 3906866 3906882 3906899 3906907 AGAGAAGTCAGCACA CGGAATATGC-CCTTC ACCGAA GAAGGCGCAAATTCCG CCAGATGGCGGTAGC TERM 5224 3908116 - 3908105 - R 70 -5.8 -4.31433 | opp_overlap 3908104 GAGCCGCAGAAGAAA GTGG CATC CCAC ATATCATTGCCGTCC TERM 5225 3909170 - 3909152 - R 70 -10.2 -2.68784 | overlap 3909148 GAATAAGATAACGGA CCGGGTCC AGC GGACGCGG ACGCGAGGCGTTGAT yhjR 3910338 - 3910150 - | hypothetical protein TERM 5226 3910868 - 3910849 - g 71 -2.2 -5.01732 | AAGGGCCGGAAAAAA TAACATTA TTTT CAATGCTA AATCATGAAAAAGGT bcsE 3910611 - 3912182 + | putative protease involved in cellulose biosynthesis bcsF 3912179 - 3912370 + | hypothetical protein TERM 5227 3913878 - 3913891 + G 70 -5.3 -4.36914 | TCTGGTAGTTCGCGT TCTTG ATGG CAAGA TTTTCTCCGAAGACA bcsG 3912367 - 3914046 + | putative endoglucanase involved in cellulose biosynthesis TERM 5228 3914081 - 3914057 - T 100 -15 -5.00339 | AGTAAGAACGAAAAA GGCCGCAGAG TTTCC CCCTGCGGCC TGATCCGGGCGCAAA ldrD 3914374 - 3914132 - | toxic polypeptide, small TERM 5229 3914306 - 3914347 + g 100 -13.2 -4.60797 | gap 2, opp_overlap 3914305 AAGGTTCAAGATTAG CCCCCGTGATGTTGTCAGGT GCAT ACCTG-CAACGT-GCGGGGG TTTTCTCTCTCCAGC TERM 5230 3914510 - 3914522 + r 83 -6.3 -5.06414 | AGAATATTATCCGCT TGCAA CCG TTGCA TTTTTCTTACGAAAA TERM 5231 3914564 - 3914539 - R 100 -16.2 -4.72272 | TTTTCTTACGAAAAA GGCCGCAGAG TTTCAC CTCTGCGGCC TGGTCCGGGCGCAAA ldrD 3914857 - 3914615 - | toxic polypeptide, small TERM 5232 3914789 - 3914830 + g 100 -13.2 -4.60797 | gap 2, overlap 3914753 TAGATGCAAGAATGG CCCCCGTGATGTTGTCAGGT GCAT ACCTG-CAACGT-GCGGGGG TTTTCTCTCTCCAGC TERM 5233 3914993 - 3915005 + r 83 -6.3 -5.06414 | AGAATATTATCCGCT TGCAA CCG TTGCA TTTTTCTTACGAAAA TERM 5234 3915046 - 3915022 - R 100 -15 -4.72272 | TTTTCTTACGAAAAA GGCCGCAGAG TTTCC CCCTGCGGCC TGATCCGGGCGCAAA ldrD 3915372 - 3915097 - | toxic polypeptide, small TERM 5235 3915271 - 3915312 + g 100 -13.2 -4.60797 | gap 2, opp_overlap 3915270 CAGGTTCAAGATTAG CCCCCGTGATGTTGTCAGGT GCAT ACCTG-CAACGT-GCGGGGG TTTTCTCTCTCCAGC ECS88_3958 3915530 - 3915369 - | hypothetical protein yhjV 3915680 - 3916951 + | transporter TERM 5236 3916953 - 3916971 + T 80 -7.3 -4.4715 | opp_overlap 3916953 AGTTGATTGAGTAAA CCGGAGC GCATG GCCCCGG TTTTGTGAGTTAACG TERM 5237 3916971 - 3916953 - T 79 -9.5 -3.76402 | opp_overlap 3916953 AGTTGATTGAGTAAA CCGGAGC GCATG GCCCCGG TTTTGTGAGTTAACG dppF 3917985 - 3916981 - | dipeptide transporter ; ATP-binding component of ABC superfamily dppD 3918965 - 3917982 - | dipeptide transporter ; ATP-binding component of ABC superfamily dppC 3919878 - 3918976 - | dipeptide transporter ; membrane component of ABC superfamily dppB 3920907 - 3919888 - | dipeptide transporter; membrane component of ABC superfamily dppA 3922665 - 3921058 - | dipeptide transporter ; periplasmic-binding component of ABC superfamily TERM 5238 3921809 - 3921825 + g 81 -9.5 -4.02424 | TTCAGCCCCGGCATT TCCATCA GGT TGATGGA TTTATCCTGCTTCAT TERM 5239 3923380 - 3923398 + r 100 -14.6 -4.25074 | opp_overlap 3923380 TACAGATGCAAAAAA GCCTGCTC GTT GAGCAGGC TTTTCGAATTTGGTC TERM 5240 3923398 - 3923380 - R 100 -14.6 -5.14477 | opp_overlap 3923380 TACAGATGCAAAAAA GCCTGCTC GTT GAGCAGGC TTTTCGAATTTGGTC eptB 3925265 - 3923574 - | putative metal dependent hydrolase TERM 5241 3925504 - 3925487 - R 100 -12.7 -4.88129 | opp_overlap 3925486 3925485 3925484 AAAAAGCAGTAAAAA GGGCCAG CTAA CTGGCCC AAATTTTATGCGTTA yhjX 3926797 - 3925589 - | putative transporter TERM 5242 3926891 - 3926877 - R 76 -6.4 -4.56775 | overlap 3926878 ATGCCTGGGGAAAAA CGGCAT GAA ATGCCA TCAGAACGGAATGAA yhjY 3927724 - 3927026 - | hypothetical protein TERM 5243 3927316 - 3927286 - G 79 -12.6 -3.06133 | overlap 3927288 3927303 CAAGCCGGGAGTCAA CACGCCAGCCTAAG GTA CTCACGCTGGCATG CCATAACGGATCGGC TERM 5244 3928053 - 3928038 - g 83 -6.1 -5.00884 | ACCGTCCTCAAAAAA CGCGA AAACTA TCGCG CATGCTTTCATCAGT tag 3927882 - 3928445 + | 3-methyl-adenine DNA glycosylase I, constitutive TERM 5245 3928547 - 3928570 + G 72 -11 -3.06696 | AGTTACTGGCGTGAC TGCATTCCGC TGGT GCGGGATGCG TATCTTGCCAACGCG yiaC 3928442 - 3928882 + | putative acyltransferase with acyl-CoA N-acyltransferase domain bisC 3931130 - 3928851 - | biotin sulfoxide reductase TERM 5246 3928945 - 3928967 + g 73 -11.3 -2.66695 | overlap 3928944 3928943 TTACCCGCACAGCCA TTCCCCAGC CGCGA GCTGGGGAG ATCTTTGGTCAGCAC TERM 5247 3930075 - 3930059 - G 75 -11.5 -3.10344 | CCTGCATGGAAGAGA GCACCGC AGC GCGGCGC GTGGGGTTACCACCA TERM 5248 3930297 - 3930309 + g 77 -6.2 -4.70659 | overlap 3930295 ACCACAAATCTCTGC CGCC CATTC GGCG TTTTTCGCTATACCG TERM 5249 3930505 - 3930534 + g 72 -4.3 -4.61231 | gap 1, opp_overlap 3930492 3930497, overlap 3930506 AAGAAATCGATGGTT TCCGATC-GCATTG GAT CAATGCAGATCAGC TTTTTCCCGCTGTCA TERM 5250 3931311 - 3931284 - H 71 -9.2 -3.30124 | gap 1 GCTCACGCGGCATAA TCTCCCGCCACGG AAC CCGTGGCAA-AGA ATAAAAAGGTTATTA yiaD 3931337 - 3931996 + | putative outer membrane lipoprotien TERM 5251 3932006 - 3932033 + F 85 -10.7 -3.82481 | CTGTAATCCCTTTCA TGTCAGGTGAT GCAGAA ATCACCTGGCA TTCTTCAGTTTTCCT TERM 5252 3932234 - 3932216 - g 70 -3.8 -4.64334 | overlap 3932218 3932220 AACCGTCGAACAAAA TGCAGCAA TTT TTGCCGAA GCTGAAGGCTTGCTG tiaE 3932100 - 3933074 + | 2-oxo-carboxylic acid reductase (glyoxalate reductase) (2-ketoaldonate reductase) TERM 5253 3933089 - 3933122 + T 85 -10.5 -4.2528 | gap 1, opp_overlap 3933096, overlap 3933096 AGCCGCGACTGCGTG GAGTAA-AGCCCGA TAATCGC TCGGGCTTTTACTC TTTATTGGGTTGCAG TERM 5254 3933096 - 3933114 + T 80 -7.4 -4.55446 | opp_overlap 3933096, overlap 3933089 ACTGCGTGGAGTAAA GCCCGA TAATCGC TCGGGC TTTTACTCTTTATTG yiaF 3933834 - 3933124 - | hypothetical protein yiaG 3934268 - 3934558 + | putative transcriptional regulator TERM 5255 3934585 - 3934604 + F 100 -13.6 -4.08692 | CTTTATTTCTGTTTA CGGTCCTG ATAA CAGGACCG TTTTCCAACCGATTA cspA 3934839 - 3935051 + | major cold shock protein TERM 5256 3935099 - 3935080 - T 70 -9.2 -3.19511 | opp_overlap 3935080, overlap 3935070 3935065 3935078 GCACAGAATCTAAGA TCCCTGCC ATTT GGCGGGGA TTTTTTTATTTGTTT TERM 5257 3935080 - 3935099 + T 100 -11.4 -6.11392 | opp_overlap 3935070 3935065 3935080 3935078 GCACAGAATCTAAGA TCCCTGCC ATTT GGCGGGGA TTTTTTTATTTGTTT TERM 5258 3935230 - 3935211 - T 100 -13.6 -4.20749 | opp_overlap 3935227 CAACACCGTAAGAAA GGCGGGAA TAAT TTCCCGCC GAAGACGCTTACTCT TERM 5259 3935458 - 3935487 + T 78 -6.5 -4.64844 | gap 1 TCTATGCATAGAGGG GCCTCACTTTGATT TAT AGTCAG-GTGGGGC TTTTCTCTGTCTGCC TERM 5260 3935619 - 3935597 - T 86 -3.5 -5.48303 | opp_overlap 3935597 ATAATCCTAAAAAAA TCTCATAAA ATTAA TATATGAGA TAATCTTTATTCAGC TERM 5261 3935695 - 3935678 - T 100 -12.7 -5.64274 | opp_overlap 3935678 TTAGCGATAAAAAAA GCCTGCC AGAT GGCAGGC TTTTTAATAACGGCG TERM 5262 3935678 - 3935695 + T 100 -12.7 -4.72272 | opp_overlap 3935678 TTAGCGATAAAAAAA GCCTGCC AGAT GGCAGGC TTTTTAATAACGGCG glyS 3937783 - 3935714 - | glycine tRNA synthetase, beta subunit TERM 5263 3937224 - 3937214 - G 72 -8.2 -3.85698 | CGGCTCGCCCATAAA GCGG TGG CCGC GAATCACGCGATCGG glyQ 3938704 - 3937793 - | glycine tRNA synthetase, alpha subunit TERM 5264 3937999 - 3938017 + g 70 -6.7 -4.12254 | gap 1 GCAGCGGATTTTCCA GCGCCAGC AACT GCTG-CGC TTCTTTCTCGTACTG TERM 5265 3938223 - 3938233 + g 72 -8.2 -3.75153 | CCGTAGGTGATCTCA CCGG TAA CCGG TTTACATTCCAGACC ysaB 3939098 - 3938799 - | hypothetical protein TERM 5266 3938905 - 3938923 + g 77 -3 -5.14563 | overlap 3938910 CTTCCCTGGAACTGT TCGAAGGC GGT GACGTCGA TTTTTTGCTCGCCGG yiaH 3939273 - 3940268 + | conserved hypothetical protein; putative inner membrane protein TERM 5267 3940275 - 3940300 + T 81 -11.9 -3.11619 | opp_overlap 3940275 GTGAGTTAAGTAGAA GCCCGGTCA CATTGGAC TGACCGGGC TTACGTGAATTATTC TERM 5268 3940300 - 3940275 - T 88 -11.9 -3.52652 | opp_overlap 3940275 GTGAGTTAAGTAGAA GCCCGGTCA CATTGGAC TGACCGGGC TTACGTGAATTATTC yiaA 3940747 - 3940310 - | conserved hypothetical protein; putative inner membrane protein yiaB 3941134 - 3940793 - | conserved hypothetical protein; putative inner membrane protein TERM 5269 3940859 - 3940841 - G 82 -2.4 -5.42131 | CAAGCAGACAAAAAA GGCGAT GGGATAG ATCACC ATTTCATAAGCATTG xylB 3942757 - 3941303 - | xylulokinase TERM 5270 3942807 - 3942779 - R 87 -5.3 -5.40072 | gap 1, opp_overlap 3942804, overlap 3942780 CGTTCCTTAAAAAAA TGCCCGG-TATC GCTACT GATAACCGGGCC AACGGACTGCACAGT TERM 5271 3942806 - 3942780 - R 75 -8.8 -3.83561 | gap 1, opp_overlap 3942804, overlap 3942779 GTTCCTTAAAAAAAT GCCCGG-TATC GCTACT GATAACCGGGC CAACGGACTGCACAG xylA 3944151 - 3942829 - | D-xylose isomerase TERM 5272 3943694 - 3943711 + g 74 -8.3 -3.86822 | GGGTTCGTCGCCGCA CCCGCGC CATA GCGAGGG TTTGTAAAGCAGTTA xylF 3944517 - 3945509 + | D-xylose transporter subunit ; periplasmic-binding component of ABC superfamily TERM 5273 3945513 - 3945541 + F 100 -12.4 -4.0641 | opp_overlap 3945500 AGCGAGCTGTAAGCG TTACGCCCCGGC GCGGA GCGGGGGCGTGA TTTCTCTCCATGCCG TERM 5274 3945933 - 3945909 - g 78 -9.5 -3.90112 | opp_overlap 3945912 3945913, overlap 3945912 TCCTGGGTAACGAAA TAACCCATAAT GGC ATTATGGATTA TGACCTGATGACGCT TERM 5275 3945930 - 3945912 - g 70 -6.8 -4.0825 | opp_overlap 3945912 3945913, overlap 3945909 TGGGTAACGAAATAA CCCATAAT GGC ATTATGGA TTATGACCTGATGAC TERM 5276 3946836 - 3946826 - g 95 -6.8 -5.1963 | opp_overlap 3946820 3946826, overlap 3946827 GGCAATCAACAAAAA GCGA TCC TCGC TCGCTGTCTGTTACT xylG 3945587 - 3947128 + | fused D-xylose transporter subunits of ABC superfamily: ATP-binding components xylH 3947106 - 3948287 + | D-xylose transporter subunit ; membrane component of ABC superfamily TERM 5277 3948304 - 3948335 + GF 100 -16.8 -4.7078 | opp_overlap 3948310 3948311 TTTGATAAAAATTTT CTCAAAGCCGGTAA CGTA TTACCGGTTTTGAG TTTTTGCATGATTCA ECS88_3987 3948199 - 3948375 + | hypothetical protein TERM 5278 3948676 - 3948694 + G 81 -6 -4.81249 | opp_overlap 3948676 3948691 TGCCACCGATAACTA TGCGCT GGTTGAA AGCGCA TTTTTGCATTTAAAA TERM 5279 3948712 - 3948732 + G 74 -3.2 -4.98436 | TTTGCATTTAAAAGA GAAAGGCG TTAAC CGCTTTGC TTTTTATGGTCTTCC xylR 3948365 - 3949516 + | DNA-binding transcriptional activator, xylose-binding TERM 5280 3949625 - 3949596 - T 100 -15.1 -4.33274 | CTGATACGAGCAAAA GCCTTATCCGCCT GACA AGTCGGATAAGGC TCGAGGAAATGCAAT bax 3950464 - 3949640 - | hypothetical protein TERM 5281 3950221 - 3950231 + g 71 -2.4 -4.92777 | overlap 3950221 AAGGCATTACAGTCC GGAG AAA CGCC TTTTTCCTTGGTGTT TERM 5282 3952739 - 3952757 + G 72 -6.6 -4.2461 | overlap 3952746 ACAAACGACACTTTC GCTGAAGC AGG GCTACGGC TTTGTTCGTGAGCAT malS 3950784 - 3952814 + | alpha-amylase TERM 5283 3954084 - 3954072 - g 71 -9.1 -3.54741 | TACCAGCGCCTGAAA GCACG CGG CGTGC TGATGGTGCCGGGGC avtA 3952992 - 3954245 + | valine-pyruvate aminotransferase yiaI 3954870 - 3954397 - | putative hydrogenase, 4Fe-4S ferredoxin-type component yiaJ 3955820 - 3954972 - | DNA-binding transcriptional repressor TERM 5284 3955889 - 3955901 + H 73 -2.7 -5.10029 | GATAATTTATAACCA CTTGA TTT TTAAG TTTTTTGAAATTCAT TERM 5285 3956019 - 3956007 - H 86 -3.3 -5.54894 | AAGCGATCAAAAAAA CAAGG AAG CCTGG GATGAAAGTGACATT yiaK 3956021 - 3957019 + | 2,3-diketo-L-gulonate dehydrogenase, NADH-dependent TERM 5286 3957453 - 3957441 - g 83 -5.5 -5.10461 | GGCATGTAATAAAAA TGCCA CTA CGGCA ATACGCAAGATCGTG yiaL 3957031 - 3957495 + | hypothetical protein TERM 5287 3958391 - 3958366 - g 72 -6.2 -4.44046 | gap 1 GCTACTGGAAATAAA TGCGACGGCTG ATGTG CA-CCATCGCA TCGAAATATTACGCA ECS88_3996 3957518 - 3958438 + | hypothetical protein TERM 5288 3958570 - 3958601 + GF 70 -6.6 -4.0281 | opp_overlap 3958574, overlap 3958565 3958577 AAACGGATACTCGAA GGCATTCTTGCGAT CATC ATCGCAATACTGTC TTGTATTATTTTTAT yiaM 3958552 - 3959019 + | transporter YiaM TERM 5289 3959853 - 3959842 - gf 77 -5.8 -4.59853 | opp_overlap 3959842 3959845, overlap 3959845 TTAACGCGGCAAAAA CCAC ATCC GTGG TGATGTTCCTGGTGG TERM 5290 3960214 - 3960204 - gf 77 -8.2 -4.10161 | opp_overlap 3960204 GACGATGCGGTAAAA GGCG TTG CGCC TTACGTCATGGTTTT yiaN 3958824 - 3960299 + | transporter yiaO 3960312 - 3961298 + | transporter lyxK 3961302 - 3962798 + | L-xylulose kinase TERM 5291 3963154 - 3963174 + G 72 -11.1 -3.05844 | CAACTGGACGCTGGA CGATGCCCG TGA CTGGCATCG TATTGGCGTGCGGCA sgbH 3962795 - 3963457 + | 3-keto-L-gulonate 6-phosphate decarboxylase TERM 5292 3963658 - 3963685 + G 75 -5.5 -4.70319 | CGGGTGTTGCTATTC CGTCAATGTGC CTGTCC GCACATCGTCG TTTTCCTTTTGGTAG sgbU 3963450 - 3964310 + | putative L-xylulose 5-phosphate 3-epimerase sgbE 3964304 - 3964999 + | L-ribulose-5-phosphate 4-epimerase aldB 3966584 - 3965046 - | aldehyde dehydrogenase B TERM 5293 3965868 - 3965856 - G 71 -9.1 -3.55444 | opp_overlap 3965855 3965862 CGTTGAGCCGGTAAA CGCCA CTT TGGCG ATGCGTTTCGAGGTC TERM 5294 3966335 - 3966315 - G 85 -11.9 -3.66356 | overlap 3966320 ATCGGCAATCTTAAA CAGAATCGC CGC GCGATCCTG CACCGAGGTGTGCGC TERM 5295 3966694 - 3966728 + r 82 -10 -3.95647 | opp_overlap 3966692 3966695, overlap 3966695 3966697 TTACGGGCAAAAGCT ACAGCGGGTAGTGTGC GAC GTACACTGCTTGCTGG TTATTAATTCTTTTC TERM 5296 3966695 - 3966727 + r 87 -13.5 -2.95762 | opp_overlap 3966692 3966695, overlap 3966694 3966697 TACGGGCAAAAGCTA CAGCGGGTAGTGTGC GAC GTACACTGCTTGCTG GTTATTAATTCTTTT TERM 5297 3966697 - 3966725 + r 73 -10.3 -3.0062 | opp_overlap 3966692 3966695, overlap 3966695 3966694 CGGGCAAAAGCTACA GCGGGTAGTGTGC GAC GTACACTGCTTGC TGGTTATTAATTCTT ECS88_4005 3967987 - 3966692 - | hypothetical protein TERM 5298 3967228 - 3967218 - G 72 -5.4 -4.46212 | TGGGCCAGCATAAAA TGCA GAA TGCA GGCACGGACCAACGG TERM 5299 3967817 - 3967835 + g 71 -3 -4.76171 | overlap 3967810 3967832 CGCCAGACGGGTAAG CGTCCACG CCA CATCGACG TTTTCTCCTTTTTTG TERM 5300 3968071 - 3968042 - R 79 -8.1 -4.37506 | opp_overlap 3968045, overlap 3968036 AGCAGGAAAGAGAAA CTATCTCAAAA AAAGCAAG TTTTGAGATAG TTGAAAAAGCGGCTG TERM 5301 3968102 - 3968080 - R 82 -7.6 -4.65838 | opp_overlap 3968081, overlap 3968081 GAGATAGTTGAAAAA GCGGCTGACA ACT CGCCAGCCGT TGTGGGAATGATGAT TERM 5302 3968101 - 3968081 - R 80 -11.1 -3.3878 | opp_overlap 3968081, overlap 3968080 AGATAGTTGAAAAAG CGGCTGACA ACT CGCCAGCCG TTGTGGGAATGATGA yiaY 3969268 - 3968117 - | Fe-containing alcohol dehydrogenase TERM 5303 3968438 - 3968422 - G 70 -5.8 -4.2558 | CATGCGGCAGCAAAA CGGCGT TACAT ACACCG TGTGGCAGGTTGTAG TERM 5304 3969397 - 3969371 - R 80 -5.9 -5.07486 | opp_overlap 3969371 TATTTTTAATAAAAA GCACGTTACAT TCATC AAATAACGTGC CTTCTTAACATTAAT TERM 5305 3969490 - 3969480 - R 70 -6.8 -4.08557 | overlap 3969481 TTCCGGAAATAATAA TGCG TCG CGCA ATAAATGATCATTTC selB 3971303 - 3969459 - | selenocysteinyl-tRNA-specific translation factor TERM 5306 3970599 - 3970615 + g 85 -10.1 -4.22009 | GTTAAGCGCGATACG CTGCCCG GCA TGGGCAG TTTCTGTTGGCTGAT TERM 5307 3970858 - 3970911 + g 71 -11.2 -2.94322 | gap 2, opp_overlap 3970875, overlap 3970856 3970875 ATTCCCCGACCTTCG GTTGCTGCGGTGATAAACAGTTTTGC CTCA GCAAAACCGTAT-TC-CCGCAGCACC TCCTTTACCTGGCGT TERM 5308 3970896 - 3970875 - G 76 -9.5 -3.85698 | opp_overlap 3970858 3970856 3970875 TGCTGCGGTGATAAA CAGTTTTGC CTCA GCAAAACCG TATTCCCGCAGCACC selA 3972691 - 3971300 - | selenocysteine synthase yibF 3973397 - 3972789 - | putative glutathione S-transferase TERM 5309 3972940 - 3972926 - G 70 -10 -3.12999 | CGACGGCACAGGCAA TGGCGA TAG TCGCCA GATTGACCGTATCGG TERM 5310 3973368 - 3973355 - G 70 -5.3 -4.35348 | ACAACAGAATAGAAA GTTTG CGTA CAAAC GGGCTGGTGTAGCTA yibH 3974604 - 3973468 - | hypothetical protein TERM 5311 3973865 - 3973885 + g 78 -12.5 -2.91264 | AAGACCATCACCGGA CGCAGCGGC AAG GCAGCTGCG TATGTACCTGGGCGG yibI 3974969 - 3974607 - | conserved hypothetical protein; putative inner membrane protein TERM 5312 3975244 - 3975229 - H 86 -3.3 -5.50723 | opp_overlap 3975229 CCATCAAAATAAAAA TGTGA CATAAC TCACA TTTAAATGCCATTTT TERM 5313 3977148 - 3977125 - g 75 -5.2 -4.59773 | opp_overlap 3977125 TTGGATCGTGAAAAA CTGACCCCGA CTTA TCTGGGTGAG TCTATCGCGGTGCCA mtlA 3975505 - 3977418 + | fused mannitol-specific PTS enzymes: IIA components ; IIB components ; IIC components TERM 5314 3977591 - 3977558 - f 75 -9.5 -3.48924 | opp_overlap 3977565 3977566 3977568 3977578, overlap 3977525 3977559 GCAGTCGGTACACAA TGCCTGATGCGACGC TGAC GCGTCTTATCAGGCC TACAGGTCAGTGCCA TERM 5315 3977590 - 3977559 - f 84 -13 -2.6914 | opp_overlap 3977565 3977566 3977568 3977578, overlap 3977525 3977558 CAGTCGGTACACAAT GCCTGATGCGACGC TGAC GCGTCTTATCAGGC CTACAGGTCAGTGCC TERM 5316 3977578 - 3977628 + F 88 -11.8 -3.53811 | opp_overlap 3977559 3977558 3977611 3977625 3977626, overlap 3977565 3977568 GATGCGACGCTGACG CGTCTTATCAGGCCTACAGGTCAG TGC CAAACACGTAGGCCGGATAAGGCG TTTACGCCGCATCCG TERM 5317 3977674 - 3977651 - f 77 -6.6 -4.58395 | opp_overlap 3977653, overlap 3977626 3977652 3977653 CGCATCCGGCAAAAA GCCCCTCTCC TCAC GGAGAGGGTT TGGGTGAGGGAAAAG TERM 5318 3977673 - 3977652 - f 76 -10.1 -3.34716 | opp_overlap 3977653, overlap 3977651 3977653 GCATCCGGCAAAAAG CCCCTCTCC TCAC GGAGAGGGT TTGGGTGAGGGAAAA TERM 5319 3977653 - 3977672 + F 100 -13.6 -3.64703 | opp_overlap 3977653 3977652 3977651 CATCCGGCAAAAAGC CCCTCTCC TCAC GGAGAGGG TTTGGGTGAGGGAAA TERM 5320 3977672 - 3977653 - f 86 -13.6 -2.60508 | opp_overlap 3977653, overlap 3977652 3977651 CATCCGGCAAAAAGC CCCTCTCC TCAC GGAGAGGG TTTGGGTGAGGGAAA mtlD 3977737 - 3978885 + | mannitol-1-phosphate dehydrogenase, NAD(P)-binding TERM 5321 3979313 - 3979340 + G 85 -12 -3.57144 | gap 1, overlap 3979313 TGGTGAACTGCATTG C-GTGGCGGCGTT ACC ACCGCCGCCACAG TTTGAACCTGCAGAC TERM 5322 3979313 - 3979339 + G 77 -12.2 -2.74144 | overlap 3979313 TGGTGAACTGCATTG CGTGGCGGCGTT ACC ACCGCCGCCACA GTTTGAACCTGCAGA mtlR 3978885 - 3979472 + | DNA-binding repressor yibT 3979692 - 3979483 - | hypothetical protein yibL 3979976 - 3980338 + | hypothetical protein TERM 5323 3980383 - 3980406 + F 79 -11.8 -2.61144 | gap 1, overlap 3980382 3980380 TCTCACCATTTACTC GCTCCTGC-TG GCA CATGCAGGAGC CTGTTTCAGAGATCG TERM 5324 3980924 - 3980913 - g 71 -2.2 -4.94058 | TGAACCTAAAGAAAA CACT GTTA AGCG TGTTAATGATATTGC ECS88_4017 3980897 - 3981055 + | conserved hypothetical protein; putative exported protein ECS88_4018 3981131 - 3981580 + | hypothetical protein TERM 5325 3981598 - 3981578 - f 100 -4.7 -5.93252 | opp_overlap 3981582, overlap 3981583 CGGAAAAACAAAAAA TAAATGCAG CTT CTGCGCTTA TATCAAGGAATAGAG TERM 5326 3981940 - 3981957 + G 72 -9.9 -3.33171 | GGAGTTCCGCTATTG GTGCACT TACC AGTGCAC TTGGTGATTCTTCAA TERM 5327 3983210 - 3983187 - g 81 -13.2 -2.64794 | TGGAACGGCACAGCA TTCAGTGCCG CGCA CGGCACCGAA GCCACCAGCAAAATC TERM 5328 3983455 - 3983410 - g 84 -8.1 -4.67982 | overlap 3983412 TGCTATGGAACAAAA CAGCTGGCGCATTCAGCGCCG CTCA CGGCACTGACGCCACCAGCAA GATCACCAATGTCAA TERM 5329 3983453 - 3983412 - g 100 -12.9 -3.95554 | overlap 3983410 CTATGGAACAAAACA GCTGGCGCATTCAGCGCCG CTCA CGGCACTGACGCCACCAGC AAGATCACCAATGTC TERM 5330 3984586 - 3984565 - g 72 -6.6 -4.28361 | opp_overlap 3984565 GCAATGCCAGCAAAA TCACCAAC GTTGCG GCTGGTGA TCTCTCCACAACCAG ECS88_4019 3981624 - 3986375 + | putative exported adhesin TERM 5331 3986520 - 3986545 + F 100 -14.1 -5.10665 | opp_overlap 3986516 AGATCAACAATCTGA GGGCAATTCTC TGAT GGGAATTGCCC TTTTCTTTATTACCT lldP 3986785 - 3988440 + | L-lactate permease TERM 5332 3988997 - 3989010 + G 76 -3.7 -5.02074 | overlap 3988989 CCGCCAGCGGATGTA CCTGG TACC CCCGG TTTTTTCACAGCTGA lldR 3988440 - 3989216 + | DNA-binding transcriptional repressor TERM 5333 3989329 - 3989311 - g 72 -11 -3.05343 | overlap 3989313 GGCATATTCTGAATA CACGCTGC GCC GCAACGTG GAAGATTTGTCAGAA TERM 5334 3989602 - 3989617 + G 74 -8.2 -3.91897 | GTTCCAGCTTTATGT GCTGCG CGAT CGCGGC TTTATGCGTAACGCC lldD 3989213 - 3990403 + | L-lactate dehydrogenase, FMN-linked TERM 5335 3990427 - 3990449 + F 79 -12 -2.79302 | opp_overlap 3990418 3990416 CGAATATCTGCTATC CTGCCCCC GCACTAA GGGGGCAG TATGCTAAACATCGT yibK 3990451 - 3990924 + | putative rRNA methylase TERM 5336 3990973 - 3990927 - T 74 -10.1 -3.22777 | gap 1, overlap 3990925 3990944 GTTGAGAGATTAAGA TGCGGTAG-GCCGGATAAGGCG TTCA CGCCGCATCCGGCACGATCACA GAATGTCAGATCCCA cysE 3991800 - 3990979 - | serine acetyltransferase TERM 5337 3991854 - 3991825 - R 71 -7.9 -3.78879 | gap 1, overlap 3991828 CACACGATAAGATAA TGA-CCGACCCG TTCTGCG CGGGCCGGGTCA TAGTGGTAACAAAGG TERM 5338 3991850 - 3991828 - R 70 -9.8 -2.97393 | overlap 3991825 ACGATAAGATAATGA CCGACCCG TTCTGCG CGGGCCGG GTCATAGTGGTAACA gpsA 3992899 - 3991880 - | glycerol-3-phosphate dehydrogenase (NAD+) TERM 5339 3992793 - 3992819 + g 78 -8.7 -4.1552 | gap 1 ATATGTTCAGGGTCA TGGCCCCAGAGG ACAA CCTC-GTGGCCA TTTCTTGCCAGGGTA TERM 5340 3992897 - 3992913 + g 81 -10.9 -3.69283 | overlap 3992908 AGCATTACGTTGGTT CATCAGG CAT CCTGATG TTCTTCAGTACCTTC secB 3993366 - 3992899 - | protein export chaperone grxC 3993681 - 3993430 - | glutaredoxin 3 TERM 5341 3993831 - 3993811 - R 71 -3.9 -4.77036 | CTGCATCATGAAAAA CGGCAGGTA AAT TATTTGCCG CGCACCAAAGGCAAG yibN 3994253 - 3993822 - | putative rhodanese-related sulfurtransferase gpmI 3994498 - 3996042 + | phosphoglycero mutase III, cofactor-independent TERM 5342 3996113 - 3996162 + G 81 -9.3 -4.07568 | gap 1, opp_overlap 3996113, overlap 3996124 GCAGGTTTGCAATCA GGCCCATCAT-CTACGCCAGCGTT CTG AGCGCTGGCGTATTGTTGTGCGCC TTTTCCGCCCACGCG TERM 5343 3996124 - 3996150 + G 100 -17.4 -3.81022 | opp_overlap 3996113, overlap 3996113 ATCAGGCCCATCATC TACGCCAGCGTT CTG AGCGCTGGCGTA TTGTTGTGCGCCTTT TERM 5344 3996444 - 3996406 - g 93 -8.6 -4.79223 | opp_overlap 3996406 3996429 3996433, overlap 3996396 3996394 3996391 3996408 CTAGAGCAGCAAAAA GCCGCCCAGGAGCGCAGC CTC GCCGCGCAACTGGATGCC GCGTTTCGTCAGGGT envC 3996076 - 3997335 + | protease with a role in cell division TERM 5345 3997471 - 3997461 - g 77 -6.8 -4.48987 | opp_overlap 3997443 CCCGCACAACGAAAA CCAG GTG CTGG CGATGCCTTCCGCTA yibQ 3997339 - 3998298 + | putative polysaccharide deacetylase yibD 3999319 - 3998285 - | putative glycosyl transferase TERM 5346 3999531 - 3999548 + r 100 -12.7 -3.83155 | opp_overlap 3999531 TATCCTCAGGCAAAA GGGCTGG AATA CCAGCCC TTGTTCGTGTTAATC TERM 5347 3999548 - 3999531 - R 100 -12.7 -4.18494 | opp_overlap 3999531 TATCCTCAGGCAAAA GGGCTGG AATA CCAGCCC TTGTTCGTGTTAATC tdh 4000583 - 3999558 - | threonine 3-dehydrogenase, NAD(P)-binding TERM 5348 4000406 - 4000423 + g 74 -2.7 -5.00884 | ATTCATGGCCCACGA CCATC GGCACCGG GATGG TTTTTTGCGACCACT kbl 4001789 - 4000593 - | glycine C-acetyltransferase TERM 5349 4002424 - 4002408 - g 81 -6.5 -4.87626 | opp_overlap 4002408, overlap 4002401 CGCGAATATGAAAAA CCGTTGA ATG TCTACGG TTACTCAAAATTCCT TERM 5350 4002596 - 4002584 - g 73 -9.1 -3.65522 | overlap 4002594 CACCCAGCTTAATAA CGGTG AAT CACCG AAGCTGTTCGAAGGT waaD 4002003 - 4002935 + | ADP-L-glycero-D-mannoheptose-6-epimerase, NAD(P)-binding waaF 4002945 - 4003991 + | ADP-heptose:LPS heptosyltransferase II waaC 4003995 - 4004975 + | ADP-heptose:LPS heptosyl transferase I TERM 5351 4005039 - 4004998 - T 75 -9 -3.68024 | opp_overlap 4004999 4005006 4005011, overlap 4004999 4005006 4005011 CTCTTTAATAGATAA TTTTGAAATAAAATCAGC TTCCTT GCTGATTTTATTTCACAT ATTCATTACTTATCT TERM 5352 4004999 - 4005038 + T 90 -12.5 -3.30798 | opp_overlap 4004999 4004998 4005006 4005011, overlap 4005006 4005011 TCTTTAATAGATAAT TTTGAAATAAAATCAGC TTCCTT GCTGATTTTATTTCACA TATTCATTACTTATC TERM 5353 4005038 - 4004999 - T 82 -12.5 -2.80493 | opp_overlap 4004999 4005006 4005011, overlap 4004998 4005006 4005011 TCTTTAATAGATAAT TTTGAAATAAAATCAGC TTCCTT GCTGATTTTATTTCACA TATTCATTACTTATC TERM 5354 4005031 - 4005006 - T 75 -9.2 -3.63305 | opp_overlap 4004999 4005006 4005011, overlap 4004999 4004998 4005011 TAGATAATTTTGAAA TAAAATCAGC TTCCTT GCTGATTTTA TTTCACATATTCATT TERM 5355 4005006 - 4005031 + T 75 -9.2 -3.67918 | opp_overlap 4005006 4004999 4004998 4005011, overlap 4004999 4005011 TAGATAATTTTGAAA TAAAATCAGC TTCCTT GCTGATTTTA TTTCACATATTCATT TERM 5356 4005026 - 4005011 - T 75 -4.7 -4.88405 | opp_overlap 4005011 4005006 4004999, overlap 4005006 4004999 4004998 AATTTTGAAATAAAA TCAGC TTCCTT GCTGA TTTTATTTCACATAT TERM 5357 4005011 - 4005026 + T 75 -4.7 -4.89521 | opp_overlap 4005006 4004999 4004998 4005011, overlap 4005006 4004999 AATTTTGAAATAAAA TCAGC TTCCTT GCTGA TTTTATTTCACATAT waaL 4006298 - 4005045 - | lipid A-core surface O-antigen ligase waaV 4007327 - 4006344 - | putative beta1,3-glucosyltransferase waaW 4008437 - 4007409 - | UDP-galactose:(Galactosyl) LPS alpha1, 2-galactosyltransferase TERM 5358 4007792 - 4007772 - G 74 -7.7 -4.05529 | ACAATGACTAAAGAA CAGAATATT TAA AATATCCTG ATCAAGGCATTTATA waaY 4009155 - 4008463 - | lipopolysaccharide core biosynthesis protein waaT 4010160 - 4009165 - | UDP-galactose:(Glucosyl) LPS alpha1, 2-galactosyltransferase TERM 5359 4010220 - 4010202 - R 79 -4 -5.27938 | opp_overlap 4010181, overlap 4010180 4010177 ATCTTTAAATAAAAA TAATAAAT ATA ATTCATTA TCCCGTTAATTGGTT waaO 4011193 - 4010177 - | UDP-glucose:(Glucosyl) LPS alpha1, 3-glucosyltransferase waaP 4012015 - 4011209 - | kinase that phosphorylates core heptose of lipopolysaccharide waaG 4013123 - 4011999 - | glucosyltransferase I waaQ 4014178 - 4013120 - | lipopolysaccharide core biosynthesis protein TERM 5360 4015212 - 4015187 - g 84 -7.5 -4.61482 | opp_overlap 4015185 GGGCGCAAAAAATAA TCAGGTGACCG TTAC CGGTAGCCTGA AATTCGATATTTCTG TERM 5361 4015738 - 4015728 - g 70 -6.8 -4.08945 | opp_overlap 4015728 ACTACGCTTGCAAAA GAGG TTT CCTC TTTACTCACCGACGC kdtA 4014591 - 4015868 + | 3-deoxy-D-manno-octulosonic-acid transferase (KDO transferase) coaD 4015876 - 4016355 + | pantetheine-phosphate adenylyltransferase mutM 4017203 - 4016394 - | formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase TERM 5362 4016688 - 4016676 - G 71 -9.1 -3.53224 | GATCCCCGCCGCAAA CAGCG ATT CGCTG GCATAGATATTCCCT TERM 5363 4017286 - 4017251 - R 100 -18.6 -2.90194 | opp_overlap 4017254 4017261, overlap 4017254 4017261 ATGGGGGCAAGCAGA TAACAAAAAACCCCGC CGGG GCGAGGTTTTTTGTTA CATCAAAGCGAGAAT TERM 5364 4017283 - 4017254 - R 100 -15.9 -3.59946 | opp_overlap 4017254 4017261, overlap 4017251 4017261 GGGGCAAGCAGATAA CAAAAAACCCCGC CGGG GCGAGGTTTTTTG TTACATCAAAGCGAG TERM 5365 4017254 - 4017283 + r 87 -13.7 -3.05384 | opp_overlap 4017254 4017251 4017261, overlap 4017261 GGGGCAAGCAGATAA CAAAAAACCCCGC CGGG GCGAGGTTTTTTG TTACATCAAAGCGAG TERM 5366 4017276 - 4017261 - R 100 -8.2 -5.60689 | opp_overlap 4017254 4017261, overlap 4017254 4017251 GCAGATAACAAAAAA CCCCGC CGGG GCGAGG TTTTTTGTTACATCA TERM 5367 4017261 - 4017276 + r 100 -6 -5.4833 | opp_overlap 4017261 4017254 4017251, overlap 4017254 GCAGATAACAAAAAA CCCCGC CGGG GCGAGG TTTTTTGTTACATCA rpmG 4017468 - 4017301 - | 50S ribosomal subunit protein L33 TERM 5368 4017345 - 4017369 + g 70 -3.6 -4.62872 | gap 1, opp_overlap 4017345 CGTGCTGGCGAACAA CTGGATC-GAA TTTT TTCAGTTCCAG TTTTTCCGGCTTAGT rpmB 4017725 - 4017489 - | 50S ribosomal subunit protein L28 TERM 5369 4017929 - 4017916 - R 72 -6.7 -4.2074 | overlap 4017919 TCCCGAACAGACAAA GATCC CGAA GGATC GCGCATAGCGGGTTA yicR 4018610 - 4017942 - | protein associated with replication fork, putative DNA repair protein dfp 4018782 - 4020002 + | fused 4'-phosphopantothenoylcysteine decarboxylase ; phosphopantothenoylcysteine synthetase, FMN-binding TERM 5370 4020312 - 4020340 + G 77 -3 -5.08601 | opp_overlap 4020304 4020316, overlap 4020317 4020327 GGACAACTTCACCAT TCAACCTGGCGA ACGCA TCGCCCAGATGA TTTTTGTTCCGGTAG dut 4019983 - 4020438 + | deoxyuridinetriphosphatase TERM 5371 4020491 - 4020471 - f 79 -11.9 -2.50817 | overlap 4020470 4020468 4020466 AACGTCATAACATAG CCGCAAACA TTT CGTTTGCGG TCATAGCGTGGGTGC ttk 4020545 - 4021141 + | division inhibitor TERM 5372 4021145 - 4021172 + T 86 -9.8 -4.41348 | opp_overlap 4021144 4021142 4021147, overlap 4021146 4021147 CAGTTGCAGTAATAT GACGCCGGATGA CTTT TCATCCGGCGAG TTTCTTTAAACGCCG TERM 5373 4021146 - 4021171 + T 91 -13.3 -3.24488 | opp_overlap 4021144 4021142 4021147, overlap 4021145 4021147 AGTTGCAGTAATATG ACGCCGGATGA CTTT TCATCCGGCGA GTTTCTTTAAACGCC TERM 5374 4021170 - 4021147 - T 100 -16.8 -2.77523 | opp_overlap 4021146 4021145 4021147, overlap 4021144 4021142 GTTGCAGTAATATGA CGCCGGATGA CTTT TCATCCGGCG AGTTTCTTTAAACGC TERM 5375 4021147 - 4021170 + T 100 -16.8 -2.54371 | opp_overlap 4021147 4021144 4021142, overlap 4021146 4021145 GTTGCAGTAATATGA CGCCGGATGA CTTT TCATCCGGCG AGTTTCTTTAAACGC pyrE 4021819 - 4021178 - | orotate phosphoribosyltransferase TERM 5376 4021877 - 4021860 - R 100 -11.3 -6.06529 | TACAGACAAAAAAAA GGCGACT CATC AGTCGCC TTAAAAATCAGTTTG rph 4022625 - 4021885 - | ribonuclease PH yicC 4022728 - 4023591 + | hypothetical protein TERM 5377 4024200 - 4024212 + G 75 -4.8 -4.83615 | opp_overlap 4024191 AGGCAACTTCGTGAA GACG AAAAG CGTC TTTTTCTGAGAAATG dinD 4023801 - 4024637 + | DNA-damage-inducible protein yicG 4024929 - 4025546 + | conserved hypothetical protein; putative inner membrane protein TERM 5378 4025566 - 4025591 + T 93 -11.9 -3.89354 | CAAAACCTGTGATCT GCTGGGCAG CCAGCCAA CTGCCCAGC TTCTTGATTTGCGCA ligB 4027225 - 4025543 - | DNA ligase, NAD(+)-dependent TERM 5379 4026604 - 4026568 - G 79 -4.4 -4.9725 | gap 2, overlap 4026570 ATGCCCAGACAAAAA CAGCCAGTGAGTTTAGCG TAT CGCTATTCCC-CTGGC-G CATCATCAGGCCAGC TERM 5380 4026603 - 4026570 - G 74 -8.1 -4.11141 | gap 1, overlap 4026568 GCCCAGACAAAAACA GCCAGTGAGTTTAGCG TAT CGCTATTCCC-CTGGC GCATCATCAGGCCAG TERM 5381 4027306 - 4027325 + H 70 -6.4 -4.18488 | AACGGAGTCTGCGAG GACGCTTC CTGA GAATCGTC TTTATTGCAGTGAAT TERM 5382 4027538 - 4027550 + G 82 -9.1 -4.15044 | opp_overlap 4027534 4027538 GCGCGGGTAAATCCA GCCTG ATT CAGGC TTTATTAAAAACCCA gmk 4027483 - 4028106 + | guanylate kinase rpoZ 4028161 - 4028436 + | RNA polymerase, omega subunit TERM 5383 4029011 - 4028993 - g 70 -5.2 -4.371 | opp_overlap 4028993, overlap 4028987 TCCACCACATTAAAA CCGAACTC GAG GAGCTGGG TTTTGAGGCGCTGTA spoT 4028455 - 4030563 + | bifunctional (p)ppGpp synthetase II and guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase trmH 4030570 - 4031259 + | tRNA (Guanosine-2'-O-)-methyltransferase TERM 5384 4031622 - 4031579 - g 75 -4.5 -4.8622 | gap 1, overlap 4031581 TGCGGCAATGAAAAA TAGCCTGGCGACAGGCC-GC CGCGT GCTGGCCTATGGCGAAGCAA AGCGCGGCAAATATG TERM 5385 4031594 - 4031581 - g 74 -8.1 -4.05402 | overlap 4031579 CGGCAATGAAAAATA GCCTG GCGA CAGGC CGCCGCGTGCTGGCC recG 4031265 - 4033346 + | ATP-dependent DNA helicase TERM 5386 4033350 - 4033371 + T 91 -13 -3.21912 | opp_overlap 4033350 4033365 TCGAATGCGTAAAAA GCGGCGGT GAGAAG ACCGCCGC TTCATCGGTTAACCG TERM 5387 4033371 - 4033350 - T 100 -13 -4.62471 | opp_overlap 4033350, overlap 4033365 TCGAATGCGTAAAAA GCGGCGGT GAGAAG ACCGCCGC TTCATCGGTTAACCG gltS 4034585 - 4033380 - | glutamate transporter TERM 5388 4033467 - 4033449 - G 77 -8.8 -4.10188 | GATATCGATAAAGAA CGCACCGA CCA TCGGCACG ACCAGGAACGCCATG TERM 5389 4034249 - 4034259 + g 72 -6.8 -4.18018 | opp_overlap 4034249 GGCTAGCCATACCAA TGCC AAT GGCA TTTTGCATCACCAAC TERM 5390 4034799 - 4034810 + H 73 -4.4 -4.80455 | TTAGATGAGGATGTG GCAA ACGT TTGC TTTTCTCTTTCGGTC TERM 5391 4034911 - 4034894 - g 90 -9.9 -4.42386 | CCTCGAGTCAGAAAA TGCGCAA CCGG TTGCGCA GACTCAAAACAGCGA TERM 5392 4035798 - 4035786 - g 76 -9.1 -3.83026 | CCGCTGTACATGAAA CGCCT GAA AGGCG GCGTACTGGCAAACG TERM 5393 4036133 - 4036146 + G 72 -6.7 -4.24002 | CGGTCTGGGCGTGTC TCAGC AGCC GCTGA TTTTGCAGTTTGCCC yicE 4034865 - 4036256 + | putative transporter TERM 5394 4036263 - 4036251 - f 74 -4.1 -4.91109 | opp_overlap 4036230, overlap 4036257 4036258 4036261 TTCCCACCAGAAAAA CAGTA ATT CACTG GCGGCGGTAAGATAA TERM 5395 4036290 - 4036261 - f 84 -13 -2.63644 | gap 1, overlap 4036251 4036258 4036257 AAAAACAGTAATTCA CTGGCGGCGGTAA GATAA TTACCGCCGC-AG TCTCACCTCTTTCAC TERM 5396 4036675 - 4036621 - g 70 -4.8 -4.56597 | CCCTGGTGGCAAAAA GTGTCGACATTGCGCTAAGCAGTCGG CAA CTGACCGAACCACGCCATGTCGATAC CATCCTGCTGGAAAA yicH 4036377 - 4038086 + | hypothetical protein TERM 5397 4038122 - 4038093 - T 88 -9.3 -4.47707 | opp_overlap 4038091, overlap 4038090 4038096 GTGCAGTAAAAATAA GGACGCTAGCG GATATCAG CGCTAGCGTTC CCCGTTATTAGCGCA TERM 5398 4038119 - 4038096 - T 72 -9.6 -3.19331 | opp_overlap 4038091, overlap 4038093 4038090 CAGTAAAAATAAGGA CGCTAGCG GATATCAG CGCTAGCG TTCCCCGTTATTAGC ECS88_4072 4038849 - 4038130 - | conserved hypothetical protein, putative sugar related regulatory protein TERM 5399 4038761 - 4038747 - GT 70 -5.6 -4.41616 | opp_overlap 4038759 ACTCTGGCAAACAAA CGCGGA AGG TCTGCG CAATGGCATGTGCTT ECS88_4073 4039756 - 4038791 - | putative sugar kinase/transcriptional regulator. ATPase domain TERM 5400 4039746 - 4039763 + gr 71 -8.3 -3.43676 | opp_overlap 4039747, overlap 4039747 TCCTTGTTGCGTAAA AGGCGGG TCAC CCCGCCC TTCTGGCTTAGTACA TERM 5401 4039747 - 4039762 + gr 79 -11.8 -2.65884 | opp_overlap 4039747, overlap 4039746 CCTTGTTGCGTAAAA GGCGGG TCAC CCCGCC CTTCTGGCTTAGTAC TERM 5402 4039762 - 4039747 - GR 93 -11.8 -4.07568 | opp_overlap 4039747 4039746 CCTTGTTGCGTAAAA GGCGGG TCAC CCCGCC CTTCTGGCTTAGTAC ECS88_4074 4040631 - 4039771 - | putative fructose-bisphosphate aldolase TERM 5403 4040169 - 4040153 - G 75 -5 -4.73613 | opp_overlap 4040152 4040156 4040160, overlap 4040154 GTACGAGCAATAAAA TCGGCG GCCTG CGCCGG ATCTGTGTAGGTCAC ECS88_4075 4041563 - 4040712 - | putative sugar aldolase ECS88_4076 4042666 - 4041575 - | putative phosphotransferase system, fructose-specific IIC component TERM 5404 4042058 - 4042010 - G 72 -7.6 -3.89822 | gap 2 GATTGAGCCGACAAA TTTC-ACGGCTT-CTGGTCCGTAG ACG CCACTGACCAGCAAGCCATCGGAA AACAGCGACATGGTT TERM 5405 4042335 - 4042321 - G 70 -5.7 -4.3534 | GTTTAAGTAGCAAAA TGGTG TAGCC CACCA GGAAACCACCCAACA TERM 5406 4042508 - 4042521 + g 79 -4.5 -5.00884 | CTGATTAAGCATCCA CGGGA TTGT TCCTG TTTTTTCACCAACAT TERM 5407 4042634 - 4042650 + g 91 -5.1 -5.34857 | TAAATGTTTTTTAAT TTCCTGT GAA ACCGGAA TTTTATTTTCTTTCA ECS88_4077 4043005 - 4042691 - | putative phosphotransferase system, fructose-specific IIB subunit TERM 5408 4042784 - 4042801 + g 83 -5.5 -5.09259 | CACAATACGTTTATT GGTGAAG CGTT CTTCTCC TTTTATTTTCACATC ECS88_4078 4043493 - 4043023 - | putative phosphotransferase system (PTS), fructose-specific IIA component ECS88_4079 4045073 - 4043520 - | putative PTS system transcriptional antiterminator TERM 5409 4045196 - 4045176 - R 77 -6.8 -4.50841 | overlap 4045177 ACAACAATACTAAAA TCTGTCCG TAATC CGGACAGT GATAAAACAAAGCAA TERM 5410 4045195 - 4045177 - R 76 -10.3 -3.28878 | overlap 4045176 CAACAATACTAAAAT CTGTCCG TAATC CGGACAG TGATAAAACAAAGCA yicI 4047686 - 4045368 - | putative alpha-glucosidase yicJ 4049078 - 4047696 - | putative transporter TERM 5411 4049749 - 4049729 - g 80 -11.9 -3.36823 | opp_overlap 4049732, overlap 4049699 4049724 TTGTTCAAAACTCAA CCATCCGGA AAT TCCGGATAG TTCGCCAGGAAGGAA ECS88_4082 4049389 - 4050555 + | conserved hypothetical protein, putative RhuM-like cytoplasmic protein ECS88_4083 4051125 - 4051493 + | hypothetical protein yicL 4051790 - 4052713 + | conserved hypothetical protein; putative inner membrane protein nlpA 4053535 - 4052717 - | cytoplasmic membrane lipoprotein-28 yicS 4053688 - 4054050 + | hypothetical protein yicM 4055446 - 4054091 - | transporter TERM 5412 4054860 - 4054825 - G 72 -6.8 -4.20368 | gap 1, overlap 4054810 4054837 4054840 CCAGCGCAATAGAAA CCGCGCCGAAGATCACC GAC AGCG-CCTTCGGCACCG TACGCGGCGGTACCA TERM 5413 4055248 - 4055258 + g 77 -8.2 -4.09864 | GTCGGGTGATGGCAT CCGC GCC GCGG TTTTCAGCAATAAAT yicN 4055944 - 4055492 - | hypothetical protein yicO 4057331 - 4055997 - | putative xanthine/uracil permease TERM 5414 4056818 - 4056840 + g 83 -5.6 -5.16237 | opp_overlap 4056793 TCACCAGGGTGTCTT TATTGGCG ACAATAA CGCCAGTA TTTTTTAATCCCATT TERM 5415 4057527 - 4057505 - H 73 -2.8 -5.09245 | TCAAAATGAGAAAAA TATGAATAAT TCT ATTAACCATA AATTTCATCACATTA ade 4057506 - 4059272 + | cryptic adenine deaminase TERM 5416 4059300 - 4059282 - T 100 -13.1 -6.22691 | GAATAATAAAAAAAA GCCCGGC GTCAT GCCGGGC AAAAGTCACCAGTTA uhpT 4060710 - 4059319 - | hexose phosphate transporter TERM 5417 4060143 - 4060129 - G 77 -6.4 -4.67048 | CGACGGGAAAATAAA CATGCC GAT GACATG ACCATCGAACAGGTA TERM 5418 4060671 - 4060693 + g 71 -9.1 -3.53012 | CTTCGAGCGGAAGGT CCAGGGTCG GCTTG CGAACCTGG TTTAAGAAAGCCAGC uhpC 4062167 - 4060848 - | membrane protein regulates uhpT expression TERM 5419 4061130 - 4061118 - G 73 -9.1 -3.65581 | ACCAATGGTGAAGAA GCAGG TTG CCTGC ATCACGTAGCTGGCA TERM 5420 4061793 - 4061781 - G 72 -5.5 -4.57569 | CCAGCCCTGGAAAAA GGCGT TCA ACACC CAAAGCACGGCAAAC uhpB 4063679 - 4062177 - | sensory histidine kinase in two-component regulatory sytem with UhpA TERM 5421 4062615 - 4062601 - G 72 -7 -4.21631 | AACCGACCTAACAAA CGGCGC ACC GCGTCG TAAACGCCCAGCGAT uhpA 4064269 - 4063679 - | DNA-binding response regulator in two-component regulatory system wtih UhpB TERM 5422 4063993 - 4063979 - G 70 -7 -4.03234 | GCGTTTGGAGAGAAA GCCGCG CGC CCCGGC GTTAAGCGCCTGCTC TERM 5423 4064319 - 4064295 - R 100 -12.2 -4.65916 | opp_overlap 4064294 4064292 4064295 TGGAGGGTAATAAAA CGCGCTTACC TTAAC GATAAGCGCG ATGTTGTTCAAGCCT TERM 5424 4064295 - 4064319 + r 70 -10 -2.63252 | opp_overlap 4064295, overlap 4064294 4064292 TGGAGGGTAATAAAA CGCGCTTACC TTAAC GATAAGCGCG ATGTTGTTCAAGCCT ilvN 4064632 - 4064342 - | acetolactate synthase I, small subunit TERM 5425 4064473 - 4064484 + g 74 -5.8 -4.45485 | overlap 4064480 CGTCATTGACCAGTA GCCA GATG TGGC TTTTGTCGCTGTCCT ilvB 4066324 - 4064636 - | acetolactate synthase I, large subunit TERM 5426 4066378 - 4066402 + r 93 -11.4 -4.16279 | gap 1, opp_overlap 4066378, overlap 4066355 AGCTTAAACGAAAAA CCCCGCCCGGT TTGC GCCG-GCGGGG TTTTGGAATCGTGTG TERM 5427 4066402 - 4066378 - R 100 -10.7 -4.99134 | gap 1, opp_overlap 4066355 4066378 AGCTTAAACGAAAAA CCCCGCCCGG TTTGCG CCG-GCGGGG TTTTGGAATCGTGTG ivbL 4066528 - 4066430 - | ilvB operon leader peptide TERM 5428 4066465 - 4066501 + g 70 -5.8 -4.27584 | gap 1, overlap 4066474 CCACCACCACACGCA CGACGACC-ACTGCGGC GGAT GGCGCAGTTGGTAGTAG TTTTGCGTTGAACAT TERM 5429 4066763 - 4066782 + H 72 -3.5 -4.93288 | overlap 4066764 GCACCATCACTGTTT CCGGCAA CATTTA TTGCCGC TTTTGTTTACATATT TERM 5430 4067677 - 4067696 + G 80 -5.6 -5.02074 | overlap 4067679 TCAGTATTTTGTTTA TTCTGCCG ATTC CGGCGGCA TTTTTTGGCGCATGG emrD 4066929 - 4068113 + | multidrug efflux system protein yidF 4068618 - 4068121 - | putative DNA-binding transcriptional regulator TERM 5431 4068550 - 4068536 - G 73 -4.2 -4.86033 | opp_overlap 4068540, overlap 4068538 AAATTGTGATAAAAA TCGGCA GGT TGCAGA GCATCCTTATACTCT yidG 4068977 - 4068615 - | conserved hypothetical protein; putative inner membrane protein yidH 4069314 - 4068967 - | conserved hypothetical protein; putative inner membrane protein TERM 5432 4069363 - 4069331 - H 100 -13.5 -3.53012 | GTTGCTCCTTGTAAA CTGTTCCTCGCCGAA AAA TTAGGCCAGGAACAG CAATAATGCATCAGA TERM 5433 4069375 - 4069385 + H 93 -5.4 -5.47159 | ACAGCAATAATGCAT CAGA ACT TCTG TTTTTTCTCTTCCAC TERM 5434 4071847 - 4071866 + H 73 -10 -3.07915 | opp_overlap 4071847, overlap 4071846 CCAATCGGCAAGGGA TCGGTCGG GCCG CCGACTGA GTTTAATTTCTCGGC yidL 4072702 - 4073598 + | putative DNA-binding transcriptional regulator yidE 4075349 - 4073688 - | putative transporter TERM 5435 4075530 - 4075510 - g 100 -14.7 -6.18768 | AAAAGACAAAAAAAA GCCCCACCA GAA TGGCGGGGC AAAGAGAATAGCTAG ECS88_4108 4075379 - 4075549 + | hypothetical protein ibpB 4075974 - 4075546 - | heat shock chaperone ibpA 4076499 - 4076086 - | heat shock chaperone yidQ 4076805 - 4077137 + | conserved hypothetical protein; putative outer membrane protein yidR 4078355 - 4077141 - | hypothetical protein TERM 5436 4077229 - 4077215 - G 70 -5.6 -4.3739 | opp_overlap 4077215 CATCCGGCGAGAAAA CCACGG CGT CCGCAG AAGGTGGATTGGCGT TERM 5437 4077827 - 4077837 + g 70 -4.6 -4.4715 | TACCGCTGTATTCAC GCGG ATG CTGC TTTTGTACGTTGACC TERM 5438 4078571 - 4078557 - g 81 -6.4 -4.82901 | overlap 4078560 4078561 CGCGCTGGATAAAAA GCACCA GCA TGGTAC TGAAGGTTTCAGCAA TERM 5439 4079331 - 4079345 + G 70 -10 -3.20348 | overlap 4079316 4079315 CTATGCGCTGGATAG CGCAGA GAT TCTGCG TTCGGTATTACTGAA TERM 5440 4079462 - 4079441 - g 95 -9.4 -4.87807 | opp_overlap 4079441 GCAAGATAGTAAAAA GCCGATGC CTGACC GCACCGGC TTTAAGAAAGTGGAT TERM 5441 4079506 - 4079472 - g 85 -10.1 -4.15222 | opp_overlap 4079480 ACCGGCTTTAAGAAA GTGGATTATGCGC AGTGGAGTG GCGCATATTCCAC AGTTGAAAGATTATC cbrA 4078456 - 4079556 + | putative oxidoreductase with FAD/NAD(P)-binding domain dgoT 4080809 - 4079517 - | D-galactonate transporter TERM 5442 4080049 - 4080039 - G 77 -3.2 -5.08601 | overlap 4080027 CCAGGTTAAGAAAAA CCAC AGT GTAG AAGCCACCGCAAATT dgoD 4082077 - 4080929 - | galactonate dehydratase dgoA 4082691 - 4082074 - | 2-oxo-3-deoxygalactonate 6-phosphate aldolase TERM 5443 4082253 - 4082265 + g 70 -5.5 -4.39989 | overlap 4082251 AGACCGCGATGTCCG GTGGT AAT ACCGC TTTTAATGCTTTGAT dgoK 4083553 - 4082675 - | 2-oxo-3-deoxygalactonate kinase dgoR 4084239 - 4083550 - | putative DNA-binding transcriptional regulator yidX 4084500 - 4085174 + | putative lipoprotein C TERM 5444 4085181 - 4085209 + T 93 -14 -3.1485 | gap 1, overlap 4085179 4085175 AATTGTTAATCGCTG CGGGCAAAC-GCA TTCA TGCCGTTTGCCCG TTCACTGATTAATTC yidA 4086030 - 4085218 - | putative hydrolase TERM 5445 4085938 - 4085950 + g 72 -5.5 -4.56775 | GCCACGGGCGCGAGC TGCGG CAA TCGCA TTTTTAACGGCAGGT TERM 5446 4086110 - 4086138 + r 79 -8.2 -4.4078 | gap 2, opp_overlap 4086110 4086109, overlap 4086109 CACCCGAGGGAAAAG GGGGATGCAACGCG CAT TGCGT-GC-TCCCC TTTTGCTTAGCGGAA yidB 4086543 - 4086145 - | hypothetical protein TERM 5447 4086621 - 4086651 + r 100 -17 -3.47751 | opp_overlap 4086626, overlap 4086626 GCGGATTGCAGAAAT AAAAAGGGCGGAGA TGA TCTCCGCCCTTTTC TTATAGCTTCTTGCC TERM 5448 4086646 - 4086626 - R 100 -16.9 -5.38054 | opp_overlap 4086621 4086626 TTGCAGAAATAAAAA GGGCGGAGA TGA TCTCCGCCC TTTTCTTATAGCTTC TERM 5449 4086626 - 4086646 + r 100 -16.9 -4.80959 | opp_overlap 4086626, overlap 4086621 TTGCAGAAATAAAAA GGGCGGAGA TGA TCTCCGCCC TTTTCTTATAGCTTC gyrB 4089197 - 4086783 - | DNA gyrase, subunit B TERM 5450 4087965 - 4087979 + g 74 -10 -3.53012 | CGCCGGATCGCGTTC CTGGCA GTC TGCCAG TTTGCCCGGCAGGCC TERM 5451 4088787 - 4088810 + g 77 -6.6 -4.56597 | ACGGTGAATTTTACC CTCGCGCTGG ATAA CCAGCTCCAG TTTTTGCGACAGGGC recF 4090299 - 4089226 - | gap repair protein TERM 5452 4089741 - 4089781 + g 70 -10.3 -3.1372 | overlap 4089739 GCCAGGTGCTGATTT GCTCCGCCAGCGGGATCAG TTC TTTATCCCACGGGCGTAGC TGTTCGTAACGAGTC TERM 5453 4090166 - 4090147 - G 73 -9.2 -3.63968 | overlap 4090140 CTGCAAACTGCGAAA CGCCCGAC CGTG GCCGAGCG TATAGATGGCTTCCA dnaN 4091399 - 4090299 - | DNA polymerase III, beta subunit dnaA 4092807 - 4091404 - | chromosomal replication initiator protein DnaA, DNA-binding transcriptional dual regulator TERM 5454 4092332 - 4092372 + g 72 -8.3 -3.75153 | gap 1, opp_overlap 4092320 4092317, overlap 4092336 4092340 GCACCGCCAGGGTTA TCT-GCCACCTGGCGAGC CGCCGC GCGCGCCAGTTGGTTAGA TTTACCTTCAACGAA TERM 5455 4092336 - 4092367 + g 80 -11.5 -3.30781 | opp_overlap 4092320 4092317, overlap 4092332 4092340 CGCCAGGGTTATCTG CCACCTGGCGAGC CGCCGC GCGCGCCAGTTGG TTAGATTTACCTTCA TERM 5456 4092340 - 4092363 + g 71 -9.5 -3.43217 | opp_overlap 4092320 4092317, overlap 4092336 4092332 AGGGTTATCTGCCAC CTGGCGAGC CGCCGC GCGCGCCAG TTGGTTAGATTTACC TERM 5457 4092478 - 4092497 + g 74 -10 -3.54129 | gap 1, opp_overlap 4092477 4092476, overlap 4092496 CGAGCGCGTAGAAGG CGCAGCACG TTG CG-GCTGCG TTTGCGCCACCTGTG rpmH 4093414 - 4093554 + | 50S ribosomal subunit protein L34 TERM 5458 4093755 - 4093735 - gf 74 -2.6 -5.06816 | gap 1 AGTCGCCAAGAAAAA CGTTCGACG CGCC CAT-GAACG CAATCGGATTAAACG rnpA 4093571 - 4093930 + | protein C5 component of RNase P yidD 4093894 - 4094151 + | hypothetical protein yidC 4094154 - 4095800 + | cytoplasmic insertase into membrane protein, Sec system TERM 5459 4095844 - 4095825 - f 82 -9.2 -4.17048 | opp_overlap 4095826, overlap 4095826 TTTTCGCTAAAATAA GGGCGGTC AGTT GACCGCCT TTTTTCTTTTCGTAG TERM 5460 4095843 - 4095826 - f 83 -12.7 -3.09908 | opp_overlap 4095826, overlap 4095825 TTTCGCTAAAATAAG GGCGGTC AGTT GACCGCC TTTTTTCTTTTCGTA TERM 5461 4095826 - 4095843 + F 100 -12.7 -5.83211 | opp_overlap 4095826 4095825 TTTCGCTAAAATAAG GGCGGTC AGTT GACCGCC TTTTTTCTTTTCGTA TERM 5462 4096928 - 4096914 - g 76 -7.8 -4.15044 | GTGGTGCGCAATAAA GCCGAT ATC ACCGGC GAAACGTTGGGGATG trmE 4095906 - 4097270 + | GTPase TERM 5463 4097279 - 4097314 + F 100 -21.4 -3.53712 | gap 1, opp_overlap 4097271, overlap 4097273 4097275 TAAGTAACCGCGCTT GCGAAGCCGCATTCTGA CTG TCAGA-TGCGGCTTCGC TTCATTGTTAGCACT tnaC 4097512 - 4097586 + | tryptophanase leader peptide TERM 5464 4098456 - 4098440 - g 78 -8 -4.35524 | CTGGCAAACTTAAAA GCGATG TACAG CATCGC GAAGAAATACGATAT tnaA 4097807 - 4099222 + | tryptophanase/L-cysteine desulfhydrase, PLP-dependent TERM 5465 4099239 - 4099229 - f 70 -5.4 -4.43309 | opp_overlap 4099235 4099237, overlap 4099232 GAAGTTTAATTAAAA CACT CAG AGTG GCTATAAGGATGTTA TERM 5466 4099417 - 4099427 + G 90 -4.6 -5.40474 | TACCTGTTGACCTTG CCGG AGC CTGG TTTTTTTGGGGCGCT tnaB 4099314 - 4100561 + | tryptophan transporter of low affinity TERM 5467 4100571 - 4100593 + F 87 -13.5 -3.12351 | opp_overlap 4100574, overlap 4100574 GGCTAAATCCTTCAG GAAGCCAGC CATTC GCTGGCTTC TTGCCTGTCAGGAAA TERM 5468 4100574 - 4100590 + F 77 -9.4 -3.70773 | opp_overlap 4100574, overlap 4100571 TAAATCCTTCAGGAA GCCAGC CATTC GCTGGC TTCTTGCCTGTCAGG TERM 5469 4100590 - 4100574 - f 72 -9.4 -3.16055 | opp_overlap 4100571 4100574 TAAATCCTTCAGGAA GCCAGC CATTC GCTGGC TTCTTGCCTGTCAGG TERM 5470 4101508 - 4101520 + GF 71 -7.7 -3.71848 | ACGTACGTTGATGAT CACCT CAC AGGTG TTATTCCTGGCGGCG mdtL 4100693 - 4101868 + | multidrug efflux system protein yidZ 4101843 - 4102802 + | putative DNA-binding transcriptional regulator yieE 4102947 - 4103708 + | putative phosphopantetheinyl transferase TERM 5471 4104122 - 4104132 + G 72 -6.8 -4.2828 | TCAGTATCACCTGCG CCAG ATT CTGG TTTTCCTCGATACAA yieF 4103730 - 4104296 + | chromate reductase, Class I, flavoprotein TERM 5472 4104304 - 4104328 + T 100 -12.2 -4.57837 | gap 1, opp_overlap 4104304, overlap 4104320 4104322 AGATCTAAATAAAAA CCCGCCA-GCA ATCA TGCATGGCGGG TTTTTAACGCGCTAT TERM 5473 4104328 - 4104304 - T 100 -12.2 -5.31519 | gap 1, opp_overlap 4104304 4104320 4104322 AGATCTAAATAAAAA CCCGCCA-GCA ATCA TGCATGGCGGG TTTTTAACGCGCTAT yieG 4105686 - 4104349 - | conserved hypothetical protein; putative inner membrane protein TERM 5474 4105565 - 4105551 - G 83 -5.7 -5.06414 | GCGGGTTAACAAAAA CGATG TAAAC CATCG TCAGGAAGGTGGTAA TERM 5475 4105839 - 4105827 - H 73 -6.3 -4.30576 | TTGGCATGACGAAAA CGTTA AAC TAACG ATAAAGGAAAGACAT yieH 4105853 - 4106518 + | putative hydrolase yieI 4106585 - 4107058 + | conserved hypothetical protein; putative inner membrane protein TERM 5476 4107100 - 4107127 + T 79 -7.7 -4.44355 | gap 1, opp_overlap 4107098 4107100 AAATGTTGGAGAACA GGCCGGA-GCGT AATTC ACACATCCGGCC TTATTTTTAAGCTTA TERM 5477 4107127 - 4107100 - T 78 -10.6 -3.22668 | gap 1, opp_overlap 4107100, overlap 4107098 AAATGTTGGAGAACA GGCCGGA-GCGTA ATT CACACATCCGGCC TTATTTTTAAGCTTA yieK 4107862 - 4107140 - | putative 6-phosphogluconolactonase yieL 4109073 - 4107877 - | putative xylanase TERM 5478 4108101 - 4108076 - G 72 -11.2 -3.01791 | gap 1 AGTTGCTGGTTAATA GCTG-CCGGCT CGTTC AGCCGGGCAGC GACACCTTCATCCGG TERM 5479 4109024 - 4109001 - G 86 -11 -3.97947 | opp_overlap 4108994, overlap 4109004 CCCACTGAGCAGAAA TACCGCTGGC AATA GCCAGCGTTA AAGCAGCAATTTTTA TERM 5480 4109021 - 4109004 - G 77 -12.7 -2.7439 | opp_overlap 4108994, overlap 4109001 ACTGAGCAGAAATAC CGCTGGC AATA GCCAGCG TTAAAGCAGCAATTT bglH 4110689 - 4109073 - | carbohydrate-specific outer membrane porin, cryptic TERM 5481 4110377 - 4110393 + g 74 -2.1 -5.16206 | opp_overlap 4110378, overlap 4110378 TGGAAGAATAAATCG AGCCTGT CTC ACTGGCA TTTTTCTCTTCATTT TERM 5482 4110754 - 4110722 - R 72 -8.6 -3.71389 | gap 1, opp_overlap 4110723, overlap 4110718 4110715 4110723 4110726 CAAAGAAAGAATTAA TGCATCGCATCCAGA CTGT TCTGAATGCGACG-A TAATTAAGGTGCTTT TERM 5483 4110754 - 4110723 - R 71 -10.2 -2.81207 | opp_overlap 4110723, overlap 4110722 4110718 4110715 4110726 AAAGAAAGAATTAAT GCATCGCATCCAGA CTGT TCTGAATGCGACGA TAATTAAGGTGCTTT TERM 5484 4110751 - 4110726 - R 81 -12.7 -2.64572 | opp_overlap 4110723, overlap 4110722 4110723 4110718 4110715 GAAAGAATTAATGCA TCGCATCCAGA CTGT TCTGAATGCGA CGATAATTAAGGTGC bglB 4112169 - 4110775 - | cryptic phospho-beta-glucosidase B bglF 4114062 - 4112188 - | fused beta-glucoside-specific PTS enzymes: IIA component ; IIB component ; IIC component bglG 4115032 - 4114196 - | transcriptional antiterminator of the bgl operon TERM 5485 4114312 - 4114288 - G 87 -4.9 -5.24551 | opp_overlap 4114288 GCAAACCAATAAAAA TGGCGATCCGC TCC GCACATTGCCA TGCTTGCGGGTAATT TERM 5486 4115095 - 4115062 - R 100 -7.4 -6.02919 | opp_overlap 4115062 TTATAAACAAAAAAA CCCGACTTCACCAG TATTCT CTGGTTATGTCAGG TTTTGCCTGCGAATG TERM 5487 4115308 - 4115278 - R 100 -13.6 -3.63054 | opp_overlap 4115282 4115305, overlap 4115282 TAAAGTTATATATAA CAAATCCCAATAAT TAA ATTATTGGGATTTA CTTGGTGAATTATTT TERM 5488 4115304 - 4115282 - R 95 -12.2 -4.42974 | opp_overlap 4115282, overlap 4115278 GTTATATATAACAAA TCCCAATAAT TAA ATTATTGGGA TTTACTTGGTGAATT TERM 5489 4115282 - 4115304 + r 93 -12.2 -3.967 | opp_overlap 4115282 4115278 GTTATATATAACAAA TCCCAATAAT TAA ATTATTGGGA TTTACTTGGTGAATT phoU 4116043 - 4115318 - | negative regulator of PhoR/PhoB two-component regulator pstB 4116831 - 4116058 - | phosphate transporter subunit ; ATP-binding component of ABC superfamily pstA 4117812 - 4116922 - | phosphate transporter subunit ; membrane component of ABC superfamily pstC 4118771 - 4117812 - | phosphate transporter subunit ; membrane component of ABC superfamily pstS 4119898 - 4118858 - | phosphate transporter subunit ; periplasmic-binding component of ABC superfamily TERM 5490 4119611 - 4119634 + g 81 -6.6 -4.72272 | AATCACGGTCGGGAA CTGGAACAGG CCTT CCTGAGCCAG TTTTTCATCAGACAG TERM 5491 4120203 - 4120184 - R 100 -11.4 -5.19251 | opp_overlap 4120181 4120184 TAACAGGAAGAAAAA TGCCCCGC TTAC GCAGGGCA TCCATTTATTACTCA glmS 4122041 - 4120212 - | L-glutamine:D-fructose-6-phosphate aminotransferase TERM 5492 4121210 - 4121244 + g 81 -6.4 -4.74801 | gap 1, opp_overlap 4121209 4121213, overlap 4121213 CCAGCTCGCTTAAAT CAACCTGACCGTGGC TGATGC GCC-CGGTAAGGGTG TTTTTGATCGCGTTC glmU 4123572 - 4122202 - | fused N-acetyl glucosamine-1-phosphate uridyltransferase ; glucosamine-1-phosphate acetyl transferase TERM 5493 4122810 - 4122797 - G 70 -5.2 -4.34402 | overlap 4122798 CCGCGCAGATCAAAA CGCG CCGGAT CGCG CAGCATAACACCTGC TERM 5494 4122822 - 4122834 + g 84 -7.7 -4.62302 | opp_overlap 4122821 4122822 CGCGCAGCATAACAC CTGCT AAC AGCAG TTTTTCAGCCTGTTC TERM 5495 4123877 - 4123908 + r 73 -10.2 -3.08032 | opp_overlap 4123882, overlap 4123882 GTCAATACGCGTAAA AAAAAGCCAGCCTG TTGC CAGACTGGCTTTTG TGCTTTTCAAGCCGG TERM 5496 4123903 - 4123882 - R 100 -12.3 -5.76949 | opp_overlap 4123882 4123877 TACGCGTAAAAAAAA GCCAGCCTG TTGC CAGACTGGC TTTTGTGCTTTTCAA TERM 5497 4123882 - 4123903 + r 91 -10.1 -4.67635 | opp_overlap 4123882, overlap 4123877 TACGCGTAAAAAAAA GCCAGCCTG TTGC CAGACTGGC TTTTGTGCTTTTCAA atpC 4124345 - 4123926 - | F1 sector of membrane-bound ATP synthase, epsilon subunit atpD 4125748 - 4124366 - | F1 sector of membrane-bound ATP synthase, beta subunit TERM 5498 4125515 - 4125538 + g 76 -7.4 -4.18018 | CGCTTTACCTACCGG GACTTCGATC GGGT GTTCGAGGTC TTTTACATCCAGACC TERM 5499 4125792 - 4125806 + r 70 -10 -2.57244 | opp_overlap 4125781 4125780, overlap 4125789 AAACCGCGGCGGCCC CCGAGA CGA TCTCGG TGAGTTCCTGAGTAA atpG 4126638 - 4125775 - | F1 sector of membrane-bound ATP synthase, gamma subunit TERM 5500 4126463 - 4126496 + g 100 -14.7 -3.91897 | opp_overlap 4126463 TTATATTCCAGATTA CCGTGTGCAAGGTGA CCAA TCACTTTGCGCATGG TTTCTGCATAAGGAC atpA 4128230 - 4126689 - | F1 sector of membrane-bound ATP synthase, alpha subunit TERM 5501 4127668 - 4127704 + g 77 -8.7 -4.13014 | overlap 4127669 CATTTGATACCGGAA TCGCGCTGGTTGATGAT GGC ATCGATAGCCAGTGCGG TTTTACCGGTCTGAC atpH 4128776 - 4128243 - | F1 sector of membrane-bound ATP synthase, delta subunit TERM 5502 4128602 - 4128646 + g 72 -5.1 -4.50686 | gap 3, opp_overlap 4128597 4128600, overlap 4128597 4128603 CTGCGATAAACGACT CGGC-GAGCGT-T-TCTGGCGC AAGC GCGCCAGAGAGAAGCTCTGCCA TTTGTTCGTTTTTGG atpF 4129261 - 4128791 - | F0 sector of membrane-bound ATP synthase, subunit b TERM 5503 4129135 - 4129156 + g 70 -3.7 -4.67353 | CTGCGGAAGCAAGGC CGTCAGCAA TTTC TTTTTGACG TTTTTCGATGGCTGC TERM 5504 4129162 - 4129190 + g 73 -11.8 -2.77899 | gap 1, overlap 4129159 CTTTTTGACGTTTTT CG-ATGGCTGCCA TTAA TGGCGGCCATACG TACTTCATGCAGAAC atpE 4129562 - 4129323 - | F0 sector of membrane-bound ATP synthase, subunit c atpB 4130424 - 4129609 - | F0 sector of membrane-bound ATP synthase, subunit a TERM 5505 4130111 - 4130091 - G 74 -11.1 -3.17051 | overlap 4130089 GGTTCATCAGGAATA CCCAGACGA AGA TCGTCAGGG CCAGCGGAGCAATCA TERM 5506 4130210 - 4130227 + g 70 -4.1 -4.66609 | gap 1 GTCTGAAACTTACCT GGCACGCC GCT GGT-TGCC TTTTTGGCTACACTA atpI 4130813 - 4130433 - | ATP synthase, membrane-bound accesory subunit TERM 5507 4130615 - 4130587 - G 70 -10.9 -2.7264 | opp_overlap 4130587 4130598 4130604, overlap 4130576 4130586 AAAGCTTCGCCAAAT GCGAATGTCCAGG CCA CCCGGCCTTTCGC TGGTGTATGCGCCTG TERM 5508 4131342 - 4131305 - R 93 -5.2 -5.52384 | gap 3, overlap 4131333 TGCTTACCAAAAAAA GCCACGTT-A-TCTTGTTG ATA CAA-AAGAGTGAACGTGGC GTTAAATGTAACCAG gidB 4132053 - 4131430 - | methyltransferase, SAM-dependent methyltransferase, glucose-inhibited cell-division protein TERM 5509 4132078 - 4132105 + r 100 -18.6 -4.77759 | overlap 4132102 4132103 CTGTTCTTGATGCGT TGCCTGGTAAGC GGGT GCTTACCAGGCA TTTTTAATGCGTTAT gidA 4134006 - 4132117 - | glucose-inhibited cell-division protein mioC 4134828 - 4134385 - | FMN-binding protein MioC asnC 4135376 - 4134918 - | DNA-binding transcriptional dual regulator TERM 5510 4135570 - 4135581 + G 70 -4.4 -4.46926 | CGTCAAATTAGCTTC GTGA AATC TCAC TTTTCTCGTCAACTG TERM 5511 4135837 - 4135782 - g 100 -17.1 -2.75074 | gap 2 CTTAGGGCAACACGA CTTCAGCGCGGGCGAAGGGCTGTACAC GCAC ATGAA-AGCCCTTCGCCC-CGATGAAG ACCGTCTTTCCCCGT asnA 4135528 - 4136520 + | asparagine synthetase A yieM 4137976 - 4136525 - | putative von Willibrand factor containing protein TERM 5512 4137610 - 4137598 - G 75 -4.8 -4.83169 | AGCGCTGGAGAAAAA GCGT GTGTA ACGC TGAAGTGATCGTGCT ravA 4139466 - 4137970 - | fused regulatory ATPase variant A ; conserved hypothetical protein TERM 5513 4139242 - 4139223 - G 71 -2.9 -4.75404 | gap 1 AAAGGGGACCAAAAA CTTCTTCC GGCGT GGA-GAAG CGGGTCATCAGATAT TERM 5514 4139617 - 4139631 + H 79 -4.2 -5.24129 | overlap 4139616 ATTTTGCCGTTAATC GTGCAT ACT GTGCGC TTTTTTGTGGGCCAA TERM 5515 4139818 - 4139841 + G 76 -3.8 -4.88736 | overlap 4139815 4139814 CAGTTTGGTTTTGGC GTTGAACGCG ATGC CGTGTTTGGC TTTTTATCGCTGATC TERM 5516 4140180 - 4140166 - g 70 -4.2 -4.68593 | TTCATGATTCAAAAA CATGGC ACG GCTATG GTCGGTAAGCTGTTT trkD 4139689 - 4141557 + | potassium transporter TERM 5517 4141565 - 4141589 + F 100 -9.3 -5.50723 | AAATCTAACGCCAGA CGCCTCCTT TCTCCAT AAGGGGGCG TTTTTGTTTTCATGG TERM 5518 4142082 - 4142112 + G 75 -11.3 -3.00907 | gap 1, overlap 4142076 4142091 4142110 GAAGTCAGGCGGTAA TTCGCA-GCGGAGA ATGT TCTCCGTATGCGAA TATCATTCTCTGTGC rbsD 4141724 - 4142143 + | putative cytoplasmic sugar-binding protein TERM 5519 4142216 - 4142205 - g 70 -7.2 -4.07568 | TTCCCGGGCGTAAAA GCCC TCTC GGGC GCAGCGTTAAATGTC TERM 5520 4142297 - 4142331 + G 70 -4.3 -4.5442 | CACCATGATGAAAGT GCTTACTGGTATC TATACTCGC GATGCCGGTACGC TTTTATGGTTGGGGA rbsA 4142151 - 4143656 + | fused D-ribose transporter subunits of ABC superfamily: ATP-binding components rbsC 4143661 - 4144626 + | D-ribose transporter subunit ; membrane component of ABC superfamily rbsB 4144651 - 4145541 + | D-ribose transporter subunit ; periplasmic-binding compoent of ABC superfamily TERM 5521 4145623 - 4145647 + F 86 -9.9 -4.38712 | opp_overlap 4145619 4145616, overlap 4145624 AAGAAAAGCAGGGCA CGCGCCACCCT AAC ACGGTGGCGCA TTTTATGGACATCCC TERM 5522 4145624 - 4145646 + F 91 -13.4 -3.22906 | opp_overlap 4145619 4145616, overlap 4145623 AGAAAAGCAGGGCAC GCGCCACCCT AAC ACGGTGGCGC ATTTTATGGACATCC rbsK 4145667 - 4146596 + | ribokinase TERM 5523 4146620 - 4146636 + G 90 -11.5 -3.91897 | opp_overlap 4146618, overlap 4146621 TACAATGAAAGATGT TGCCCGC CTG GCGGGCG TTTCTACCTCAACAG TERM 5524 4146621 - 4146635 + G 78 -12.8 -2.94924 | opp_overlap 4146618, overlap 4146620 ACAATGAAAGATGTT GCCCGC CTG GCGGGC GTTTCTACCTCAACA rbsR 4146600 - 4147592 + | DNA-binding transcriptional repressor of ribose metabolism hsrA 4148985 - 4147558 - | multidrug or homocysteine efflux system yieP 4149700 - 4149008 - | putative transcriptional regulator TERM 5525 4151792 - 4151779 - R 74 -6.7 -4.41177 | overlap 4151783 GATAGAAAGTGAAAA GCAAG GCGT CTTGC GAAGCAGACTGATAC TERM 5526 4152018 - 4151994 - R 72 -8 -3.93061 | gap 1, opp_overlap 4152001 AGCTGAAAATTGAAA CACTGAACAAC GAAA GTTGTTC-GTG AGTCTCTCAAATTTT TERM 5527 4152572 - 4152560 - R 70 -6.2 -4.2354 | GAAAGGCGAAAAGAA CCCC GGCGA GGGG AGTGAAAAAGAACCT TERM 5528 4153873 - 4153862 - R 71 -4.4 -4.7254 | ACTGTTTATTAAAAA CACA GCAC TGTG CAAACACGAAAGTGG TERM 5529 4155210 - 4155224 + r 71 -10 -2.82742 | opp_overlap 4155209 4155210 AAATTTAGCAGTAAG CCGGTT ATA AACCGG TGGTTGTAAAAGAAT TERM 5530 4155224 - 4155210 - R 70 -10 -2.53908 | opp_overlap 4155210, overlap 4155209 AAATTTAGCAGTAAG CCGGTT ATA AACCGG TGGTTGTAAAAGAAT TERM 5531 4155432 - 4155413 - R 76 -10.8 -3.00946 | opp_overlap 4155413, overlap 4155410 CCCTGCCAGAAATCA TCCTTAGC GAAA GCTAAGGA TTTTTTTTATCTGAA TERM 5532 4155413 - 4155432 + r 100 -10.8 -6.02914 | opp_overlap 4155413 4155410 CCCTGCCAGAAATCA TCCTTAGC GAAA GCTAAGGA TTTTTTTTATCTGAA hdfR 4156340 - 4155501 - | DNA-binding transcriptional regulator TERM 5533 4155698 - 4155715 + g 72 -9.9 -3.31144 | CAATCTGTTGCTGTG CCAGTTC AGCA GAACTGG TTGTCAGAATGGGAA TERM 5534 4156132 - 4156152 + g 78 -7.6 -4.36914 | opp_overlap 4156145 CAGGTGCTCATGAGC GTTTCTGC ATAAG GCAGAAGC TTTTCTCCGGCAGCG yifE 4156459 - 4156797 + | hypothetical protein TERM 5535 4156804 - 4156816 + T 100 -6.9 -5.72616 | opp_overlap 4156804 4156798 GACGATTAATAAAAA GGGCG AAA TGCCC TTTTTTTATGTCAGT TERM 5536 4156816 - 4156804 - T 83 -6.2 -5.15167 | opp_overlap 4156804, overlap 4156798 GACGATTAATAAAAA GGGC GAAAT GCCC TTTTTTTATGTCAGT yifB 4158372 - 4156822 - | putative bifunctional enzyme and transcriptional regulator TERM 5537 4157127 - 4157156 + g 82 -9.3 -4.26076 | opp_overlap 4157117, overlap 4157110 TTACACGTTGTTTAA CGGTGGTGCTG TTTTCTCC CGGCACTACCG TTTTACTCAAAATGC TERM 5538 4157714 - 4157726 + g 71 -10.5 -2.93089 | overlap 4157711 AGTAAAAGGTTGTGC CCGCC AGC GGCGG TAATTTCCAGTCCTC TERM 5539 4158195 - 4158210 + g 70 -6 -4.22535 | opp_overlap 4158187 TGATAATGGCGCTGC GCACGC GATC GCGAGC TTCTTTTACCGTTGT TERM 5540 4158492 - 4158482 - H 72 -5.4 -4.57569 | TGATGCTCGCAAAAA TGCA GCG TGCA AAGGATGAACTACGA TERM 5541 4158594 - 4158571 - H 74 -4 -5.00616 | opp_overlap 4158577 TTTCTTTTTAAAAAA CAACAATTTC TCTT GAAATTATTA AAGACATCATAAAAA ilvL 4158695 - 4158793 + | ilvG operon leader peptide TERM 5542 4158843 - 4158816 - f 85 -11.2 -3.45366 | opp_overlap 4158818, overlap 4158801 4158818 GCCTTAACGAACTAA GACCCCCGCACC GAAA GGTCCGGGGGTT TTTTTTGACCTTAAA TERM 5543 4158841 - 4158818 - f 100 -13.8 -3.29727 | opp_overlap 4158818, overlap 4158816 CTTAACGAACTAAGA CCCCCGCACC GAAA GGTCCGGGGG TTTTTTTTGACCTTA TERM 5544 4158818 - 4158841 + F 100 -13.8 -5.81032 | opp_overlap 4158818 4158816 CTTAACGAACTAAGA CCCCCGCACC GAAA GGTCCGGGGG TTTTTTTTGACCTTA TERM 5545 4159736 - 4159747 + G 70 -5.8 -4.25283 | overlap 4159718 CGATCTACTGATCGC CGTG GGCG CACG TTTTGATGACCGGGT ilvG 4158933 - 4160579 + | Acetolactate synthase isozyme II large subunit (ALS-II) (Acetohydroxy-acid synthase II large subunit) (AHAS-II) ilvM 4160576 - 4160839 + | acetolactate synthase II, small subunit TERM 5546 4160846 - 4160829 - f 70 -5.5 -4.3767 | overlap 4160831 CCACATCACAACAAA TCCGCGC CTGA GCGCAAA AGGAATATAAAAATG ilvE 4160859 - 4161788 + | branched-chain amino-acid aminotransferase TERM 5547 4161820 - 4161799 - f 100 -12.3 -5.61913 | opp_overlap 4161799 AATAAATACAAAAAA TGGGACGGC ACGC ACCGTCCCA TTTACGAGACAGACA TERM 5548 4161799 - 4161820 + F 85 -11.6 -3.53012 | opp_overlap 4161799 AATAAATACAAAAAA TGGGACGG CACGCA CCGTCCCA TTTACGAGACAGACA ilvD 4161853 - 4163703 + | dihydroxyacid dehydratase TERM 5549 4163805 - 4163787 - g 70 -10.2 -3.14132 | overlap 4163760 GCGCCGGTCTACGAA GCGGCGCA GGT CACGCCGC TACAAAAAATGGAAA ilvA 4163706 - 4165250 + | threonine deaminase ilvY 4166137 - 4165247 - | DNA-binding transcriptional dual regulator TERM 5550 4165285 - 4165301 + g 95 -9.4 -4.82901 | opp_overlap 4165275 4165285 AGAACGCCTCAATCA GCGGCT CATGC AGCCGC TTTTTCTGCGCACAG TERM 5551 4166103 - 4166088 - G 83 -10.4 -4.07568 | opp_overlap 4166078 4166094 4166094 GCGCTGCGGCCAAAA TGGCGG CTTT CCGCCA GATGCAGGAAGGTTT TERM 5552 4167102 - 4167085 - g 73 -9.1 -3.5774 | overlap 4167076 ACCGAAGCGCTGAAA CAGGGCG GCAT CACCCTG ATGATGGACCGTCTT ilvC 4166287 - 4167762 + | ketol-acid reductoisomerase, NAD(P)-binding TERM 5553 4167777 - 4167805 + T 100 -16.1 -3.24825 | overlap 4167778 4167781 ATAGCGATTCAGAGT TCAAGGCCTTCTC CCG GAGAAGGCCTTGC TGTTAGTTACGGTAC TERM 5554 4167778 - 4167804 + T 100 -19.6 -2.54574 | overlap 4167777 4167781 TAGCGATTCAGAGTT CAAGGCCTTCTC CCG GAGAAGGCCTTG CTGTTAGTTACGGTA TERM 5555 4167781 - 4167801 + T 100 -15.5 -3.42147 | overlap 4167778 4167777 CGATTCAGAGTTCAA GGCCTTCTC CCG GAGAAGGCC TTGCTGTTAGTTACG ppiC 4168089 - 4167808 - | peptidyl-prolyl cis-trans isomerase C (rotamase C) TERM 5556 4169291 - 4169303 + G 74 -3.3 -5.01497 | overlap 4169292 CCCGTACAAAATATC TGGCG GTA CGTCG TTTTTCTCTCGTCCT TERM 5557 4169714 - 4169687 - g 84 -10.6 -3.72592 | AATGCGCATGAAGAA CGTCAACCAACT GTTT AGCTGGATGACG GAGATGCTCGAAGGC TERM 5558 4170033 - 4170018 - g 81 -10.4 -3.90922 | ACGCTGTGTAAAGAA CGCCGT CAGT ACGGCG AACTGGTGCGCCCGG rep 4168176 - 4170197 + | DNA helicase and single-stranded DNA-dependent ATPase TERM 5559 4170261 - 4170287 + T 75 -8.8 -3.79747 | gap 1 AATGCACTTCCAGCG GCCAGTGGACA TAGCTC TG-CCACTGGC TTTCCTGATCAATAA gpp 4171728 - 4170244 - | guanosine pentaphosphatase/exopolyphosphatase TERM 5560 4171607 - 4171617 + g 81 -6.8 -4.65916 | AGGCCGGCAGCCAGA CGCA CTT TGCG TTTTATTCGCGTCAG ECS88_4201 4171913 - 4171734 - | hypothetical protein rhlB 4173129 - 4171864 - | ATP-dependent RNA helicase TERM 5561 4172381 - 4172399 + gH 100 -7.4 -5.5604 | overlap 4172382 CACTCTTCTTCGATC AGCGTTTG CAG CAAACGCA TTTTTTCTTCGTTAG TERM 5562 4172382 - 4172398 + gH 86 -10.9 -3.91997 | overlap 4172381 ACTCTTCTTCGATCA GCGTTTG CAG CAAACGC ATTTTTTCTTCGTTA trxA 4173260 - 4173589 + | thioredoxin 1 rhoL 4173730 - 4173831 + | rho operon leader peptide TERM 5563 4174319 - 4174307 - g 70 -4.1 -4.63486 | ACGCCCGCAACAAAA TCCTC TTT GAGAA CTTAACCCCGCTGCA rho 4173916 - 4175175 + | transcription termination factor TERM 5564 4175190 - 4175219 + F 100 -13.7 -3.38183 | opp_overlap 4175195, overlap 4175195 AATTTGTCTTATGCC AAAAACGCCACGT GTTT ACGTGGCGTTTTG CTTTTATATCTGTAA TERM 5565 4175195 - 4175214 + F 100 -13.6 -4.75518 | opp_overlap 4175195, overlap 4175190 GTCTTATGCCAAAAA CGCCACGT GTTT ACGTGGCG TTTTGCTTTTATATC TERM 5566 4175214 - 4175195 - f 100 -13.6 -4.62069 | opp_overlap 4175195 4175190 GTCTTATGCCAAAAA CGCCACGT GTTT ACGTGGCG TTTTGCTTTTATATC TERM 5567 4175435 - 4175451 + G 100 -8.1 -5.7946 | TTTACTGACAGTGAG TACTGAT CTC ATCAGTA TTTTTTTATTCACGA TERM 5568 4175856 - 4175894 + G 89 -14 -3.14881 | opp_overlap 4175864, overlap 4175842 4175864 TTTGCCGTCTGGGCG GCCATTAATGCGTTCAAC ATG GTTGATGGCATTGATGGC TTGCTGGGCGGGTTG TERM 5569 4176481 - 4176471 - g 70 -6.8 -4.11751 | overlap 4176461 ATTAAGCGCGTAAAA CGCA GAC TGCG TAGAAATCGTGGTGG rfe 4175415 - 4176518 + | UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase TERM 5570 4176944 - 4176924 - g 72 -11.1 -3.02144 | opp_overlap 4176928 4176929, overlap 4176929 GGATGGTGGGCAATA GCAAAGCCG ATG CGGCGTTGC TGGATGAAATGATTA TERM 5571 4176939 - 4176929 - g 74 -8.2 -3.92324 | opp_overlap 4176929 4176928, overlap 4176924 GTGGGCAATAGCAAA GCCG ATG CGGC GTTGCTGGATGAAAT wzzE 4176530 - 4177576 + | Entobacterial Common Antigen (ECA) polysaccharide chain length modulation protein TERM 5572 4177587 - 4177612 + F 100 -18.3 -3.61517 | opp_overlap 4177576 4177580 4177583 AATAGCAACACTGCT GCGGTGAGCGC AAAG GCGCTCGCCGC TTATTCGAAGAGAAT TERM 5573 4178323 - 4178305 - g 100 -13.2 -4.15044 | GTGGCTTTGAAGAAA TCTGCCAG GCG CTGGCAGA CATCGCCACCACGCA rffE 4177632 - 4178762 + | UDP-N-acetyl glucosamine-2-epimerase TERM 5574 4178937 - 4178952 + G 76 -3.9 -5.00616 | CGAGCGTAGTAAAAA CTGCC GTAGAA GGCGG TTTTTTACGAGCGAG TERM 5575 4179414 - 4179429 + G 70 -5.4 -4.31692 | CCGAAAACAGCTTCC GCGATG TGAA TATCGC TTTTGCTAATGAATT rffD 4178759 - 4180021 + | UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase TERM 5576 4180543 - 4180513 - g 74 -7.5 -4.07885 | gap 1, opp_overlap 4180530 4180539 4180540 TATTCCGCGTCAAAA GCCAGCAGCG-ACC ATCT GGTGCGCGCCTGGC TGCGGACCTATGGTC rffG 4180021 - 4181088 + | dTDP-glucose 4,6-dehydratase TERM 5577 4181359 - 4181373 + G 72 -7.8 -3.97947 | opp_overlap 4181337 4181346 CAGCCCAGTCCGGAC GGTCTG GCG CAGGCC TTTATCATCGGTGAA rffH 4181107 - 4181988 + | glucose-1-phosphate thymidylyltransferase TERM 5578 4182365 - 4182352 - g 76 -8.1 -4.19258 | opp_overlap 4182355 4182356 ACAGTGGATTGAAAA TGCCG TGCG CGGCA CCTTTGATCATCAAT rffC 4182095 - 4182640 + | TDP-fucosamine acetyltransferase TERM 5579 4182744 - 4182772 + G 81 -9.6 -4.07568 | gap 1, opp_overlap 4182720 4182771, overlap 4182771 GATGGTGGTTTTACC CGTCGCTGCCAGC AGTG GCTGG-AGCAACG TTTTGGCAGCGCCAA rffA 4182645 - 4183775 + | TDP-4-oxo-6-deoxy-D-glucose transaminase TERM 5580 4183891 - 4183911 + G 76 -11.1 -3.36289 | CCGGCGGGGCTTGGG CTGGCGGCA AAT TTCCGCCAG TTGATTACCGTGCTC wzxE 4183777 - 4185027 + | O-antigen translocase TERM 5581 4185076 - 4185086 + G 70 -4.6 -4.56597 | overlap 4185048 CTCACCATAACCGAA CCGT TCT GCGG TTTTTCAACGACGCG TERM 5582 4185127 - 4185098 - g 73 -11.4 -2.70932 | gap 1, opp_overlap 4185094 4185107 GCGGTTTTTCAACGA CGCGC-TGGCCGC GACGA GCGGGCACGCGCG CGAGTTTATGGTTGC TERM 5583 4185297 - 4185332 + G 85 -6.8 -4.8667 | overlap 4185327 AATCCCAAACTGTGG CTGGCTCTGCTGAGTG GTGG CATTAAGCCCAGCCAG TTTTTCTGGCATATC TERM 5584 4185379 - 4185393 + G 71 -2.1 -5.02074 | ATGAGCTTTCCAGTG GCTTG AGATA TAAGC TTTTTTACCCGCTAC rffT 4185024 - 4186103 + | TDP-Fuc4NAc:lipidIIFuc4NAc transferase TERM 5585 4186404 - 4186385 - g 73 -9.2 -3.64822 | opp_overlap 4186400, overlap 4186373 ACCCGTCTACGCAAA CGCGTTGC TGAT GCACCGCG CCGTCCGCTGTTTAC wzyE 4186100 - 4187452 + | putative Wzy protein involved in ECA polysaccharide chain elongation rffM 4187455 - 4188195 + | UDP-N-acetyl-D-mannosaminuronic acid transferase TERM 5586 4188213 - 4188238 + F 72 -9.7 -3.18764 | opp_overlap 4188214, overlap 4188211 4188209 TTCCTCTCTTTGTAA AGCGACGGAGT GGTC ACTTCGTCGCC TGTCTGCTTTTTTAT TERM 5587 4188237 - 4188214 - f 81 -11 -3.53012 | opp_overlap 4188213 4188211 4188209 TCCTCTCTTTGTAAA GCGACGGAGT GGTC ACTTCGTCGC CTGTCTGCTTTTTTA TERM 5588 4188356 - 4188346 - f 70 -6.8 -4.10612 | ACCCATAACGATAAA CGGT AAC ACCG GAAAGCATGCAAACA TERM 5589 4188712 - 4188722 + G 77 -8.2 -4.06892 | opp_overlap 4188711 4188708 GATCTCAGAAATCAC CGCC ATT GGCG TTTATGTCCAGTTCT TERM 5590 4188878 - 4188858 - g 71 -10.5 -2.87051 | opp_overlap 4188858, overlap 4188857 TCGCGATGATCAAAG TCACCACGA TTA TCGTGATGA TTGTCATTGGCCTGG TERM 5591 4189349 - 4189333 - g 72 -5.7 -4.58395 | CGCACTGGCGAAAAA CCGTCAG TTA CCGGCGG CAATGGCGAAAGTTT yifK 4188386 - 4189771 + | putative amino acid transporter TERM 5592 4190319 - 4190334 + F 100 -11.8 -5.8901 | CCGACCAATTTTGAA CCCCGC TTCG GCGGGG TTTTTTGTTTTCTGT aslB 4190457 - 4191692 + | regulator of arylsulfatase activity TERM 5593 4191866 - 4191911 + T 71 -7.7 -3.74077 | gap 1 TAGTCAGATTTAATC TGCGCGCGTG-GTGGATATTTT TTC AGGATCTCCATATACGCGTGCA TTTCGGTCTGTAGCG aslA 4193505 - 4191850 - | arylsulfatase-like enzyme TERM 5594 4193247 - 4193261 + g 100 -3.5 -5.63504 | opp_overlap 4193225, overlap 4193248 AGAAAACAACCACGT TCGGT TTCTT ACCGG TTTTTTTCTCAAGTT TERM 5595 4193622 - 4193612 - R 70 -2.6 -4.91459 | opp_overlap 4193612 TAATAGTGATAAAAA TAAA TTA TTTA TTTATCCAGAAAATG TERM 5596 4194104 - 4194129 + r 100 -11.9 -5.76633 | ACAGACCTGTTTTAA CGCCTGCTC CGTAATAA GAGCAGGCG TTTTTTTATATATCA hemY 4195380 - 4194184 - | putative protoheme IX synthesis protein hemX 4196570 - 4195383 - | putative uroporphyrinogen III methylase TERM 5597 4196316 - 4196327 + g 70 -3.6 -4.62336 | CAGCTCGGCTTTTTG GCTC TCCT GGGC TTTTTGCAGTGCCGT hemD 4197332 - 4196592 - | uroporphyrinogen III synthase hemC 4198270 - 4197329 - | hydroxymethylbilane synthase TERM 5598 4199156 - 4199133 - g 76 -7.4 -4.2828 | CCTGATTGATGAAAA CCGCTTCCGT CATA ATGAAAGCGG CAGCCTGGGGGGCGA TERM 5599 4200819 - 4200799 - g 75 -6.8 -4.30987 | overlap 4200795 ATTTCGCATAACAAA CTGCACGG CCTGT CAGTGCAG GTTGAAACCAATCAC cyaA 4198657 - 4201203 + | adenylate cyclase TERM 5600 4201236 - 4201209 - T 77 -9.2 -3.72576 | gap 1, overlap 4201210 TTTTTCGTGATGAAA GTGCCGGA-AAGC GAG GCTTATCCGGCAT GCAATCTTAGCGGAA TERM 5601 4201235 - 4201210 - T 82 -12.7 -2.83403 | gap 1, overlap 4201209 TTTTCGTGATGAAAG TGCCGGA-AAGC GAG GCTTATCCGGCA TGCAATCTTAGCGGA cyaY 4201563 - 4201243 - | frataxin, iron-binding and oxidizing protein ECS88_4231 4202927 - 4201611 - | conserved hypothetical protein; putative exported protein TERM 5602 4204766 - 4204743 - g 71 -3 -4.82901 | gap 1, opp_overlap 4204753, overlap 4204744 GGTGCCGGACAAAAA CGACC-GCGCC ACT GGCGATGGTCC ATCCCAGGTGAATTA yifL 4204582 - 4204785 + | putative lipoprotein TERM 5603 4205034 - 4205058 + G 77 -10 -3.67737 | gap 1, opp_overlap 4205029, overlap 4205032 TGGCAGTGAAGTGGC GCAGTGCG-GC AACG GCGCGCGCTGC TTTGCCCGTTTTGTG dapF 4204822 - 4205646 + | diaminopimelate epimerase TERM 5604 4205798 - 4205761 - g 76 -12.8 -2.64099 | gap 1, opp_overlap 4205761 4205766, overlap 4205760 CGCGCGCAGTAGAAG CGATACGTGTGCCGCAT CCGGT ACGCGGCAC-CGTTTCG TTGGTCGAGTGGCAC TERM 5605 4205761 - 4205798 + G 74 -10.6 -3.16564 | gap 1, opp_overlap 4205761 4205760, overlap 4205766 CGCGCGCAGTAGAAG CGATACGTGTGCCGCAT CCGGT ACGCGGCAC-CGTTTCG TTGGTCGAGTGGCAC TERM 5606 4205766 - 4205793 + G 72 -7.7 -3.95852 | gap 1, opp_overlap 4205761 4205760, overlap 4205761 GCAGTAGAAGCGATA CGTGTGCCGCAT CCGGT ACGCGGCAC-CG TTTCGTTGGTCGAGT TERM 5607 4205874 - 4205897 + G 77 -6.6 -4.52047 | opp_overlap 4205874 4205876, overlap 4205866 GCGCTGTTGATGGAA CAGGCAATCG CCAA CGAAGGCCTG TTTTATCGTCTACTC yigA 4205643 - 4206350 + | hypothetical protein TERM 5608 4206698 - 4206685 - g 77 -6.7 -4.57569 | TCATCTGCCGAAAAA CATCG ACGT CGATG ATATGAATCGGCTGC xerC 4206347 - 4207243 + | site-specific tyrosine recombinase yigB 4207243 - 4207959 + | putative hydrolase TERM 5609 4208110 - 4208082 - g 83 -10.1 -4.05714 | opp_overlap 4208093, overlap 4208084 AGCCTTAATGACAAA CAGCGCGAAGCGG TGG CCGCGCCACGCAG CAACCTTCTGGTGCT TERM 5610 4208108 - 4208084 - g 85 -11.3 -3.6217 | opp_overlap 4208093, overlap 4208082 CCTTAATGACAAACA GCGCGAAGCGG TGG CCGCGCCACGC AGCAACCTTCTGGTG TERM 5611 4208093 - 4208115 + G 71 -9 -3.44051 | opp_overlap 4208084 4208082 CAAACAGCGCGAAGC GGTGGCCGCG CCA CGCAGCAACC TTCTGGTGCTGGCGG uvrD 4208043 - 4210205 + | DNA-dependent ATPase I and helicase II TERM 5612 4210201 - 4210249 + T 90 -12.4 -3.34192 | overlap 4210202 CCCGGTTGGAGACGG TGTGACGTTGCGGAATGCGGTG CGCCA TACCGCATTCCGCATCAGCACC TTACTTAGCGCACTT TERM 5613 4210202 - 4210248 + T 100 -15.9 -2.60194 | overlap 4210201 CCGGTTGGAGACGGT GTGACGTTGCGGAATGCGGTG CGCCA TACCGCATTCCGCATCAGCAC CTTACTTAGCGCACT ECS88_4240 4211152 - 4210250 - | conserved hypothetical protein; putative exported protein yigE 4211999 - 4211235 - | hypothetical protein TERM 5614 4211432 - 4211418 - G 79 -3.5 -5.06414 | CTGGCTCAACAAAAA CACGG CGTTC CCATG TTTATTAATCCCAAC corA 4212369 - 4213319 + | magnesium/nickel/cobalt transporter TERM 5615 4213355 - 4213326 - T 82 -9.3 -4.1891 | opp_overlap 4213327, overlap 4213327 TGGTTGTAATATAAA TGCCGGGTAAAGA TTGT TCTTTATCCGGCT TATTGCTGAAAATTG TERM 5616 4213327 - 4213354 + T 100 -15 -3.72592 | opp_overlap 4213327 4213326 GGTTGTAATATAAAT GCCGGGTAAAGA TTGT TCTTTATCCGGC TTATTGCTGAAAATT TERM 5617 4213354 - 4213327 - T 83 -12.8 -3.11024 | opp_overlap 4213327, overlap 4213326 GGTTGTAATATAAAT GCCGGGTAAAGA TTGT TCTTTATCCGGC TTATTGCTGAAAATT ECS88_4243 4213852 - 4213355 - | hypothetical protein ECS88_4244 4214697 - 4213849 - | hypothetical protein TERM 5618 4214955 - 4214984 + r 93 -9.4 -5.04385 | opp_overlap 4214957, overlap 4214983 CTGTCAGCATGGCAA TATGCCCACTCT CATGCA AGAGTCGGCATA TTTTTTCAGAATATA rarD 4215898 - 4215008 - | putative chloramphenicol resistance permease TERM 5619 4215096 - 4215106 + g 72 -4.6 -4.59773 | AAAGTTACCATCTTA TCGG CAC CCGG TTTTTCACCATAAAA TERM 5620 4215343 - 4215325 - G 72 -8.8 -3.82208 | TAGCAAACAGGTAAA TCGCCGCC ACG GGCAGCAA CCACATAGTTTCGAT TERM 5621 4215794 - 4215761 - G 85 -3.1 -5.40464 | gap 1, overlap 4215769 CACCATAAAGAAAAA CGACCAGATCACG-CG ATG CGTCAGGATCTCATCG GCGGGCACGTAGTAA TERM 5622 4215884 - 4215849 - G 74 -3.2 -4.89521 | gap 1, opp_overlap 4215851 4215852, overlap 4215852 ATACCCCAAATAAAA TAAGCGGCAAGAGCG AGTAATA CGC-CCTGCCGCGTT TGTTTTGCATCCATC TERM 5623 4215851 - 4215882 + g 70 -3.6 -4.68908 | gap 1, opp_overlap 4215849 4215852, overlap 4215852 ACCCCAAATAAAATA AGCGGCAAGAGCG AGTAATA CGCCCT-GCCGCG TTTGTTTTGCATCCA TERM 5624 4215881 - 4215852 - G 90 -9.3 -4.54026 | gap 1, opp_overlap 4215852 4215851, overlap 4215849 CCCCAAATAAAATAA GCGGCAAGAGCG AGTAATA CGC-CCTGCCGC GTTTGTTTTGCATCC TERM 5625 4215927 - 4215939 + r 73 -4.8 -4.67943 | opp_overlap 4215927, overlap 4215920 4215922 TTTTAATTGGTAACA GCAG TTTAC CTGC TTTTATGTCTTCAAC yigI 4216417 - 4215950 - | hypothetical protein pldA 4216582 - 4217451 + | outer membrane phospholipase A TERM 5626 4217527 - 4217548 + F 100 -12.3 -5.27335 | overlap 4217534 TTGCAGTTTCTCGCG CAGGCGCTG AAAA TAGCGCCTG TTTTTATTTCAGGCA TERM 5627 4218080 - 4218103 + F 76 -8.8 -3.87994 | overlap 4218076 4218075 GCCCTCGGTCAGCTG CGTCAGCGTT TTCC GACGCTGCCG TTTATGGCGCTGACT TERM 5628 4219057 - 4219041 - f 75 -9.5 -3.5394 | opp_overlap 4219040 AAACTGTTCGCCAAA TTACGCA AAC TGCGTAA ATCGATTGCCGATGA rhtC 4219320 - 4219940 + | threonine efflux system TERM 5629 4219961 - 4219997 + T 78 -8.8 -4.09864 | gap 1, opp_overlap 4219964 4219973, overlap 4219963 4219964 GATGCGTCATCAGAG TAA-GTCGGATAAGGCG TTTA CGCCGCATCCGACATTA TTTTCACGCATGCCT TERM 5630 4219963 - 4219994 + T 80 -8.6 -4.17762 | opp_overlap 4219964 4219973, overlap 4219961 4219964 TGCGTCATCAGAGTA AGTCGGATAAGGCG TTTA CGCCGCATCCGACA TTATTTTCACGCATG TERM 5631 4219964 - 4219993 + T 81 -12.1 -3.10175 | opp_overlap 4219964 4219973, overlap 4219963 4219961 GCGTCATCAGAGTAA GTCGGATAAGGCG TTTA CGCCGCATCCGAC ATTATTTTCACGCAT TERM 5632 4219993 - 4219964 - T 100 -14.3 -3.29471 | opp_overlap 4219964 4219963 4219961, overlap 4219973 GCGTCATCAGAGTAA GTCGGATAAGGCG TTTA CGCCGCATCCGAC ATTATTTTCACGCAT rhtB 4220621 - 4220001 - | neutral amino-acid efflux system TERM 5633 4221687 - 4221702 + G 74 -3.2 -5.00616 | opp_overlap 4221667 TGCGCTCAGTCGCGC TCCACG CTAT CGTTGA TTTTTTCAACAGGCA pldB 4220732 - 4221754 + | lysophospholipase L(2) yigL 4221762 - 4222562 + | putative hydrolase metR 4224378 - 4223425 - | DNA-binding transcriptional activator, homocysteine-binding yigM 4222638 - 4223537 + | conserved hypothetical protein; putative inner membrane protein TERM 5634 4223828 - 4223808 - Gf 72 -7.5 -3.89346 | opp_overlap 4223820, overlap 4223812 GCTGCACCGGATAAA TCAACAGCG TTT CGCTGGCGA GGTCTTCCGGCGTGA TERM 5635 4223824 - 4223812 - Gf 75 -9.1 -3.61244 | opp_overlap 4223820, overlap 4223808 CACCGGATAAATCAA CAGCG TTT CGCTG GCGAGGTCTTCCGGC TERM 5636 4224343 - 4224353 + gF 72 -6.8 -4.23434 | overlap 4224339 GCCGCAGTTCCGCAA CGCT TGT AGCG TTTTCAGGTGTTTTA TERM 5637 4224673 - 4224651 - g 70 -4.1 -4.71426 | gap 1, opp_overlap 4224671, overlap 4224655 CTGGGATCAACAAAA GCAAGCGGGT ATCG ACCTGCT-GC CGGTGGGCGATTTTG TERM 5638 4226709 - 4226684 - g 74 -7.5 -4.07687 | overlap 4226702 ACTGTGGCCTGAAAA CGCGCGGCT GGCCAGAA ACCCGCGCG GCACTGGCGAACATG metE 4224496 - 4226757 + | 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase TERM 5639 4226796 - 4226817 + T 100 -13.1 -4.19817 | opp_overlap 4226782 4226796 ATTGCAGTACGATAA TGGCTTCCA GTAC TGGAAGCCA TTTTGCATGAGTGCC TERM 5640 4226817 - 4226796 - T 100 -13.1 -3.44229 | opp_overlap 4226796, overlap 4226782 ATTGCAGTACGATAA TGGCTTCCA GTAC TGGAAGCCA TTTTGCATGAGTGCC ECS88_4258 4227186 - 4226926 - | hypothetical protein ECS88_4259 4227503 - 4227246 - | hypothetical protein ECS88_4262 4229085 - 4229675 + | conserved hypothetical protein; putative sugar phosphate isomerase involved in capsule formation ptsG 4229717 - 4231225 + | fused glucose-specific PTS enzymes: IIBcomponent and IIC component TERM 5641 4231255 - 4231236 - f 89 -15 -2.64973 | ACTAATTCGAGATTA GCGGGCTG GTTT CAGCCCGC CAGACAGAGAGAGCT ECS88_4264 4231276 - 4233273 + | transketolase 1, thiamin-binding TERM 5642 4233318 - 4233275 - T 75 -8.8 -3.77087 | overlap 4233284 TACTGAACAGCTAAA CCTGCACAAGGGGTGAAAGG ATGA CCTTTTACCCCTTGAAACGG GAGCCAAGAAACTCT TERM 5643 4233309 - 4233284 - T 85 -11.9 -3.3506 | overlap 4233275 GCTAAACCTGCACAA GGGGTGAAAGG ATGA CCTTTTACCCC TTGAAACGGGAGCCA ECS88_4265 4234148 - 4233303 - | hypothetical protein TERM 5644 4233926 - 4233937 + g 72 -4.4 -4.68994 | GATTAATGACTTCTT TTGC TAAT GCAA TTTTTAAATGGTAAT ECS88_4266 4235254 - 4234349 - | putative transcritional regulator TERM 5645 4235304 - 4235279 - R 71 -10.5 -2.74144 | opp_overlap 4235276, overlap 4235278 TGGTCAGTGGTAAAG TGGCTGAATCT CTCC AGATTCAGCCG TAATCATTGCCTGAG ECS88_4267 4236555 - 4235332 - | putative permease; putative Purine-cytosine permease and related proteins TERM 5646 4236182 - 4236153 - G 73 -3.5 -4.8667 | overlap 4236177 TAGAGGCGACAAAAA TGACACAGCCAGC CGCC ACTAACAGTGCCA GTGGAACTTCCAGTC ECS88_4268 4236970 - 4236581 - | hypothetical protein ECS88_4269 4238030 - 4236987 - | Putative Carbamate kinase TERM 5647 4237053 - 4237067 + gr 91 -11.4 -3.8646 | opp_overlap 4237052 4237053 4237055 TTGCGGTGAAGTAAT CAGGCC GCT GGCCTG TTTGCCTTGTTGCTG TERM 5648 4237067 - 4237053 - GR 77 -11.4 -2.60075 | opp_overlap 4237053, overlap 4237052 4237055 TTGCGGTGAAGTAAT CAGGCC GCT GGCCTG TTTGCCTTGTTGCTG TERM 5649 4237780 - 4237767 - GR 72 -5.9 -4.30719 | opp_overlap 4237772 GCGGCGCAGAATAAA GCCCA CCTG CGGGC CATTACCGTGGGTTA ECS88_4270 4239411 - 4237936 - | hypothetical protein ECS88_4271 4240916 - 4239357 - | Putative enzyme, Putative Succinyl-CoA synthetase, alpha subunit ECS88_4272 4241871 - 4241011 - | hypothetical protein TERM 5650 4241060 - 4241038 - G 71 -9.1 -3.54424 | opp_overlap 4241036 GTTCAGGGTTCGAAA GCCATGCAG CATTC CTGCAAGGC AATCTACTCCTGACG ECS88_4273 4242545 - 4241877 - | conserved hypothetical protein; putative Isochorismate hydrolase TERM 5651 4242705 - 4242737 + r 88 -10.7 -4.19238 | opp_overlap 4242712 4242716, overlap 4242706 4242708 GGGAGTCAAAGAGTG GCATACAGCAACAAA TTT TTTGATGCTGTATGG TTTTGAGATTAAAAA TERM 5652 4242706 - 4242736 + r 89 -14.2 -3.11222 | opp_overlap 4242712 4242716, overlap 4242705 4242708 GGAGTCAAAGAGTGG CATACAGCAACAAA TTT TTTGATGCTGTATG GTTTTGAGATTAAAA TERM 5653 4242708 - 4242734 + r 76 -11 -3.11289 | opp_overlap 4242712 4242716, overlap 4242706 4242705 AGTCAAAGAGTGGCA TACAGCAACAAA TTT TTTGATGCTGTA TGGTTTTGAGATTAA ysgA 4243611 - 4242802 - | putative hydrolase udp 4243873 - 4244637 + | uridine phosphorylase TERM 5654 4244664 - 4244643 - T 100 -13.7 -5.95539 | GCTGAAATAAAAAAA CGCTCCCCA ACTT CGGGGAGCG ATACCAGTTATTGAC ECS88_4276 4246162 - 4244672 - | hypothetical protein ECS88_4277 4246684 - 4246175 - | putative permease subunit TERM 5655 4246382 - 4246370 - G 85 -6.9 -4.73682 | opp_overlap 4246370 4246380, overlap 4246371 CGCCACAATATAAAA CGCGG TTG CCGCA ATTCCTGTTGCTGTT ECS88_4278 4247672 - 4246698 - | putative periplasmic binding protein ECS88_4279 4248401 - 4247697 - | phospho acidic carbohydrate aldolase ECS88_4280 4249320 - 4248316 - | acidic carbohydrate kinase ECS88_4281 4250198 - 4249344 - | putative transcriptional regulator TERM 5656 4249993 - 4250014 + g 72 -4.3 -4.68593 | overlap 4249997 GTTGTGCTCCGGGTC GTGCCGGTG AACT CGCCGATAC TTTTTAGGTCATGGC TERM 5657 4250943 - 4250929 - g 85 -7.1 -4.78839 | AAGGCGACAATAAAA CCCAG GGCAA CTGGG GCGAGGTAGTATTGA rmuC 4250328 - 4251755 + | recombination limiting protein ubiE 4251850 - 4252605 + | bifunctional 2-octaprenyl-6-methoxy-1, 4-benzoquinone methylase and S-adenosylmethionine:2-DMK methyltransferase yigP 4252619 - 4253224 + | hypothetical protein TERM 5658 4253340 - 4253303 - g 83 -9.9 -4.1196 | gap 1, opp_overlap 4253303 4253306 AACTGATCCCCAAAA TGCGTATCACCCT-GCCG CTA CGGCTATGGCGATACTCA TTATTCTGGATGCCA ubiB 4253221 - 4254861 + | 2-octaprenylphenol hydroxylase tatA 4254940 - 4255209 + | TatABCE protein translocation system subunit tatB 4255213 - 4255728 + | TatABCE protein translocation system subunit TERM 5659 4256069 - 4256081 + G 70 -4.8 -4.53303 | overlap 4256060 GCCGCTGCTGGTTTC CAGC TCTCT GCTG TTTTATATCGGCATG tatC 4255731 - 4256507 + | TatABCE protein translocation system subunit TERM 5660 4256534 - 4256509 - f 88 -8.9 -4.49364 | opp_overlap 4256511 4256514, overlap 4256510 4256511 4256514 AAACTGAAGAATAAA TTCAACCGCCC GTCA GGGCGGTTGTC ATATGGAGTACAGGA TERM 5661 4256533 - 4256510 - f 90 -12.4 -3.27992 | opp_overlap 4256511 4256514, overlap 4256509 4256511 4256514 AACTGAAGAATAAAT TCAACCGCCC GTCA GGGCGGTTGT CATATGGAGTACAGG TERM 5662 4256511 - 4256532 + F 100 -15.9 -2.63596 | opp_overlap 4256510 4256509 4256511 4256514, overlap 4256514 ACTGAAGAATAAATT CAACCGCCC GTCA GGGCGGTTG TCATATGGAGTACAG TERM 5663 4256532 - 4256511 - f 100 -15.9 -2.5571 | opp_overlap 4256511 4256514, overlap 4256510 4256509 4256514 ACTGAAGAATAAATT CAACCGCCC GTCA GGGCGGTTG TCATATGGAGTACAG TERM 5664 4256529 - 4256514 - f 85 -11.8 -3.41554 | opp_overlap 4256514 4256511, overlap 4256511 4256510 4256509 GAAGAATAAATTCAA CCGCCC GTCA GGGCGG TTGTCATATGGAGTA TERM 5665 4256514 - 4256529 + F 88 -11.8 -3.47078 | opp_overlap 4256511 4256510 4256509 4256514, overlap 4256511 GAAGAATAAATTCAA CCGCCC GTCA GGGCGG TTGTCATATGGAGTA tatD 4256549 - 4257331 + | DNase, magnesium-dependent rfaH 4257816 - 4257328 - | DNA-binding transcriptional antiterminator TERM 5666 4258395 - 4258383 - g 85 -3.3 -5.4505 | overlap 4258384 CCTGCCAACAAAAAA TCGTC TCT GGCGA TGACGTCGATCTCAA TERM 5667 4258613 - 4258631 + G 70 -6.6 -4.04206 | TGGTGTGCGGCGCAT CCGGGCGA ACG TTTCCCGG TTTCTGTGGCGCTGG ubiD 4257983 - 4259476 + | 3-octaprenyl-4-hydroxybenzoate decarboxylase TERM 5668 4259481 - 4259469 - f 70 -6.2 -4.24123 | opp_overlap 4259469 4259468 4259464 TTAACAACGGTAAAA GCGC CTGAT GCGC GTTTGTTTTGCCCTA TERM 5669 4259582 - 4259605 + G 79 -3.7 -5.14626 | overlap 4259584 GATACCGTATATCGT GTCCGCATC GTGCCA GACGCGGCC TTTTCTTTTCGTGCT fre 4259522 - 4260223 + | flavin reductase TERM 5670 4260254 - 4260236 - T 100 -9.5 -5.76633 | TGAGATATAAAAAAA CCCGCCC CTGAC AGGCGGG AAGAACGGCAACTAA TERM 5671 4260323 - 4260356 + T 79 -11.7 -2.56596 | overlap 4260330 4260333 GCAATTGGTGCACGA TGCCTGATGCGACGC TGGC GCGTCTTATCAGGCC TACATTGGTGCCGGA TERM 5672 4260448 - 4260414 - T 75 -10.7 -2.87931 | gap 1, opp_overlap 4260389 4260422 4260425, overlap 4260389 CGTATCCGGCATACA GTGCCCGATGCGACGC TGCC GCGTCTTATCGGGC-C TACAAAAGTTCTGAA fadA 4261669 - 4260506 - | 3-ketoacyl-CoA thiolase (thiolase I) fadB 4263868 - 4261679 - | fused 3-hydroxybutyryl-CoA epimerase and delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase and enoyl-CoA hydratase ; 3-hydroxyacyl-CoA dehydrogenase TERM 5673 4263673 - 4263653 - G 76 -3.9 -4.91459 | overlap 4263654 GAACAGGGACAAAAA TTCGGTGAT ATC AGCACCGAC GATAAAGGCTGCTTT pepQ 4264058 - 4265389 + | proline dipeptidase yigZ 4265389 - 4266003 + | putative elongation factor TERM 5674 4266282 - 4266301 + G 78 -5.6 -4.73682 | TTCTGGACCGTGCTG GGTAGCGT CGGT GCGCTCCC TTTTATCTTCTCGGA TERM 5675 4266971 - 4267001 + G 77 -9.7 -3.57144 | gap 1 TAACCAGGCGTTTTT CCAGGTGG-TGTCG ATGG CGACAACCGCCGGG TTTACAACTGACAGC TERM 5676 4267219 - 4267238 + G 75 -5 -4.84761 | CACTGCCGGAACGTA TCCTCGAA GCCG TTTGGGGA TTTTTCTCCGCCTAT trkH 4266042 - 4267493 + | potassium transporter hemG 4267505 - 4268050 + | protoporphyrin oxidase, flavoprotein TERM 5677 4270291 - 4270254 - T 100 -6.3 -5.68438 | opp_overlap 4270256 4270271, overlap 4270256 TGATTAAATAAAAAA TACTTCAGAGTGTACCT GCAA AGGTTCACTGCGAAGTT TTGCTCTTTAAAAAT TERM 5678 4270256 - 4270289 + T 77 -6.7 -4.49756 | opp_overlap 4270256 4270254, overlap 4270271 ATTAAATAAAAAATA CTTCAGAGTGTACCT GCAA AGGTTCACTGCGAAG TTTTGCTCTTTAAAA TERM 5679 4270289 - 4270256 - T 88 -8.9 -4.47052 | opp_overlap 4270256 4270271, overlap 4270254 ATTAAATAAAAAATA CTTCAGAGTGTACCT GCAA AGGTTCACTGCGAAG TTTTGCTCTTTAAAA TERM 5680 4270354 - 4270330 - T 72 -8 -3.93061 | gap 1, opp_overlap 4270337 AGCTGAAAATTGAAA CACTGAACAAC GAAA GTTGTTC-GTG AGTCTCTCAAATTTT TERM 5681 4270908 - 4270896 - T 70 -6.2 -4.2354 | GAAAGGCGAAAAGAA CCCC GGCGA GGGG AGTGAAAAAGAACCT TERM 5682 4272209 - 4272198 - T 71 -4.4 -4.7254 | ACTGTTTATTAAAAA CACA GCAC TGTG CAAACACGAAAGTGG TERM 5683 4273563 - 4273544 - T 100 -13.6 -3.83214 | opp_overlap 4273544 TCAAATTAAGCGAAA GGCCATCC GTCA GGATGGCC TTTTTGCATTGGAGC TERM 5684 4273544 - 4273563 + T 100 -13.6 -4.74103 | opp_overlap 4273544 TCAAATTAAGCGAAA GGCCATCC GTCA GGATGGCC TTTTTGCATTGGAGC mobB 4274142 - 4273630 - | molybdopterin-guanine dinucleotide biosynthesis protein B TERM 5685 4274134 - 4274144 + g 71 -3.2 -4.7373 | AGCAAAGGCGAGTAA CGGT ATC ATCG TTTTTCCTGCCATCG mobA 4274723 - 4274139 - | molybdopterin-guanine dinucleotide synthase yihD 4274793 - 4275062 + | hypothetical protein TERM 5686 4275387 - 4275405 + G 72 -8.8 -3.78953 | TAACGATGAAGTTCC GGTCGCAG CAC CTGTGGCC TTTAATGGTCAGACT TERM 5687 4276096 - 4276084 - g 72 -6.3 -4.31043 | ATAGAACAGGCAAAA GTTCT ACA AGAAC CCCCTTTGCAATTAA yihE 4275139 - 4276125 + | putative kinase TERM 5688 4276251 - 4276241 - g 77 -6.8 -4.58663 | opp_overlap 4276232 4276241, overlap 4276242 4276245 ACTACCCTGGAAAAA CCAG TTG CTGG CGCGCCGCAAGTGCT dsbA 4276142 - 4276768 + | periplasmic protein disulfide isomerase I TERM 5689 4276782 - 4276766 - f 77 -3.1 -5.24129 | overlap 4276774 CTGTCCGAGAAAAAA TAATTCA ATG TAAATTA CATAAAGCCCGTGAA TERM 5690 4276808 - 4276789 - f 100 -13.6 -4.17516 | opp_overlap 4276789 TGTAAATTACATAAA GCCCGTGA ATAT TCACGGGC TTTTTTTATTATTTA TERM 5691 4276789 - 4276808 + F 100 -13.6 -6.01369 | opp_overlap 4276789 TGTAAATTACATAAA GCCCGTGA ATAT TCACGGGC TTTTTTTATTATTTA TERM 5692 4277349 - 4277334 - g 71 -3.2 -4.85782 | GCCGCGAAAAATAAA TCGCCC GTGG AAGCGA CATTGCGATTCGCGT yihF 4276923 - 4278353 + | hypothetical protein TERM 5693 4278392 - 4278356 - T 82 -8.9 -4.25104 | gap 1, opp_overlap 4278356 4278357 4278387, overlap 4278358 4278359 TTTTGTTCATTAAAA TACTCACTCGCCTCTG CTCATT CAGAGGCGAGTAAA-A CTTACTTTTCCTGCC TERM 5694 4278391 - 4278358 - T 100 -14 -3.73042 | opp_overlap 4278357 4278356 4278387, overlap 4278356 4278359 TTGTTCATTAAAATA CTCACTCGCCTCTG CTCATT CAGAGGCGAGTAAA ACTTACTTTTCCTGC TERM 5695 4278390 - 4278359 - T 93 -15.3 -2.83504 | opp_overlap 4278357 4278356 4278387, overlap 4278358 4278356 TGTTCATTAAAATAC TCACTCGCCTCTG CTCATT CAGAGGCGAGTAA AACTTACTTTTCCTG yihG 4279326 - 4278394 - | putative endonuclease TERM 5696 4278900 - 4278863 - G 70 -6.3 -4.22554 | gap 1 TGACGTAATAAATAA GCGCGGGA-ATAACGCTT CAT AAACGGCATATCCAGCGC CCAGCACGCCAGGCC TERM 5697 4279169 - 4279154 - G 77 -3.2 -5.10601 | overlap 4279155 ATAAAATCACAAAAA CGCGAA ACCT TTCGCC AAATGACTGGCACAG TERM 5698 4279256 - 4279236 - G 100 -6.9 -5.4833 | overlap 4279239 GGACGGAACAAAAAA TAGTGACCA AAA TGGTCAATA CGATACTCAGCAAAA TERM 5699 4279355 - 4279345 - H 72 -8.2 -3.9122 | overlap 4279332 CAGTGCGCTAAAGAA GCGC AAG GCGC AGATTTTAGCAGAAA TERM 5700 4280083 - 4280072 - g 90 -7.2 -5.09426 | GCGAAGCCGAAAAAA CCGG GCGT CCGG TGCTGATCAGCACTG TERM 5701 4280318 - 4280288 - g 76 -3.8 -5.00616 | GCGTCGGTGAAAAAA CCGCGCAGGCATTG CTG CAAGGTCTTGGCGG GCTGGATACGCTGTA TERM 5702 4280617 - 4280599 - g 77 -10.2 -3.5936 | opp_overlap 4280614, overlap 4280575 GCTAAAGGGGCGAAA CCCGCAGC CAG GCCGCAGG AAACCAGTGTTGCAG TERM 5703 4281505 - 4281494 - g 81 -7.2 -4.64334 | AACCGCTGAAGAAAA CGCC GGGT GGCG CGCCGTCAACGTCGG polA 4279690 - 4282476 + | fused DNA polymerase I 5'->3' exonuclease ; 3'->5' polymerase ; 3'->5' exonuclease TERM 5704 4282700 - 4282725 + T 100 -19.1 -5.4505 | opp_overlap 4282693 GCTGAATATTTTAGC CGCCCCAGTCA GTAA TGACTGGGGCG TTTTTTATTGGGCGA yihA 4283454 - 4282858 - | GTP-binding protein TERM 5705 4283963 - 4284008 + H 100 -19.3 -3.69341 | opp_overlap 4283975, overlap 4283975 CGTTAAGGGTTATGA GTCAGGAAAAAAGGCGACAGA GTAA TCTGTCGCCTTTTTTCTTTGC TTGCTTTCTGTTAGA TERM 5706 4283975 - 4283996 + H 100 -14.5 -5.72053 | opp_overlap 4283975, overlap 4283963 TGAGTCAGGAAAAAA GGCGACAGA GTAA TCTGTCGCC TTTTTTCTTTGCTTG TERM 5707 4283996 - 4283975 - H 100 -14.5 -5.1675 | opp_overlap 4283975 4283963 TGAGTCAGGAAAAAA GGCGACAGA GTAA TCTGTCGCC TTTTTTCTTTGCTTG yihI 4284072 - 4284581 + | hypothetical protein TERM 5708 4284704 - 4284663 - f 72 -10.2 -2.91144 | overlap 4284660 4284665 4284686 4284688 TTATTCGTTAAACTA CAG-CGGTTGTCGCGGCGAC AAAA GTGGCTGCG-CAACCGGCTG ATGACTCGAAACGGG TERM 5709 4284743 - 4284686 - f 84 -8.4 -4.36914 | gap 3, overlap 4284665 4284663 4284660 4284688 GTCGCGGCGACAAAA GTGGCTGC-GCA-ACCGGCTGATGACTCG AAA CGGG-CATCCGCCGGTACGCCGTAGCCGC CAGAGACGCCATCGG hemN 4284770 - 4286143 + | coproporphyrinogen III oxidase, SAM and NAD(P)H dependent, oxygen-independent glnG 4287912 - 4286503 - | fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator ; sigma54 interaction protein glnL 4288973 - 4287924 - | sensory histidine kinase in two-component regulatory system with GlnG TERM 5710 4288533 - 4288545 + g 75 -4.7 -4.82667 | opp_overlap 4288534, overlap 4288534 CGCCGCGCCACGTAA ACCGC CAA GCGGA TTTTTAATCTCATGC TERM 5711 4289085 - 4289068 - R 87 -7 -5.28176 | TTGACGGAGAAAAAA GCCCAT GCAGAG ATGGGC TGAAAGTTTCCACGG TERM 5712 4289130 - 4289109 - R 76 -8.6 -3.91911 | overlap 4289110 TCCACGGCAACTAAA TCCCGGCG TTGTTG CGCCGGGT AGTACAACTTCAACT TERM 5713 4289129 - 4289110 - R 80 -12.1 -2.94825 | overlap 4289109 CCACGGCAACTAAAT CCCGGCG TTGTTG CGCCGGG TAGTACAACTTCAAC glnA 4290556 - 4289147 - | glutamine synthetase TERM 5714 4289769 - 4289779 + g 70 -6.8 -4.13945 | CCGGAACCGTTATCA CCGA ACA TCGG TTTTGGCATAAAGGT TERM 5715 4290776 - 4290762 - H 76 -10 -3.37959 | opp_overlap 4290737 4290724 4290725, overlap 4290737 CAATGGGAACATTAA GCACCA TAT TGGTGC AATGACCTTTGGATA bipA 4290929 - 4292752 + | GTP-binding protein TERM 5716 4292765 - 4292804 + T 100 -13.8 -3.28712 | opp_overlap 4292776, overlap 4292776 TAATTTCGTTTTTTA GTTATAAAAAACCTGCCA TCGC TGGCAGGTTTTTTTTGGC TTATGGAAAACAAAA TERM 5717 4292776 - 4292793 + T 100 -11.3 -5.87688 | opp_overlap 4292776, overlap 4292765 TTTAGTTATAAAAAA CCTGCCA TCGC TGGCAGG TTTTTTTTGGCTTAT TERM 5718 4292793 - 4292776 - T 100 -11.3 -5.28176 | opp_overlap 4292776 4292765 TTTAGTTATAAAAAA CCTGCCA TCGC TGGCAGG TTTTTTTTGGCTTAT TERM 5719 4292845 - 4292815 - T 84 -9.8 -4.18018 | opp_overlap 4292820 4292834, overlap 4292820 TTGGCTTATGGAAAA CAAAATCCGCTGAA ATT CCCAGCGGATTTTC CGAAGTTTCAATTTC TERM 5720 4292820 - 4292840 + T 78 -8.3 -4.12942 | opp_overlap 4292815 4292820, overlap 4292834 TTATGGAAAACAAAA TCCGCTG AAATTCC CAGCGGA TTTTCCGAAGTTTCA TERM 5721 4292840 - 4292820 - T 93 -9.7 -5.10933 | opp_overlap 4292820 4292834, overlap 4292815 TTATGGAAAACAAAA TCCGCTGAA ATT CCCAGCGGA TTTTCCGAAGTTTCA ECS88_4322 4293647 - 4292859 - | Putative DEOR-type transcriptional regulator TERM 5722 4292969 - 4292953 - G 88 -2.1 -5.55664 | GCATCAGTAAAAAAA GCCCTGA CAT TCCGTGC ATTGCCAATTGAAAC ECS88_4323 4294634 - 4293687 - | putative sugar kinase TERM 5723 4295021 - 4294992 - g 70 -4.3 -4.56597 | gap 1, opp_overlap 4294992 4294993, overlap 4294993 CTGTTGGGGGAAAAA GGCGTCTG-TGAAA CTG TTTCATCTGACGCG TTAGTGATTGATATG TERM 5724 4295111 - 4295091 - g 93 -6.1 -5.24416 | overlap 4295093 GAATTACAAGAAAAA GGCATCAAT ATG ATGGACGCC CCCGTGGGCAGAACG ECS88_4324 4294686 - 4295633 + | putative oxidoreductase with NAD(P)-binding Rossmann-fold domain, putative 3-hydroxyisobutyrate dehydrogenase TERM 5725 4295927 - 4295943 + G 71 -2.9 -4.83615 | TAATTCTTGCGGCCT GATTGTC GCT GCCGATC TTTTTATCCCAGGTA ECS88_4325 4295658 - 4296545 + | putative aldolase yihT ECS88_4326 4296578 - 4297588 + | Conserved hypothetical protein, putative dehydrogenase, putative GroES-like protein TERM 5726 4297908 - 4297939 + G 71 -9.6 -3.53012 | gap 1, opp_overlap 4297894 4297936, overlap 4297894 4297896 4297935 TCGCCGCGTTAATTG GCGGTTTATTA-GCG AAC CGAGTAATAAACCGC TTTGGGCAAAAGCGG TERM 5727 4297954 - 4297936 - g 78 -8.9 -4.26871 | opp_overlap 4297908 4297935 GAACCGAGTAATAAA CCGCTTT GGGCA AAAGCGG GCATTTATTATTGGC ECS88_4327 4297658 - 4299091 + | putative transporter TERM 5728 4299130 - 4299089 - f 100 -15.4 -4.2528 | opp_overlap 4299097, overlap 4299093 GCTGAATTGAAGAAA TAATTTAATGCGCATCGG TTTAAG CCGATGCGCATTAATTCA AACTGCCCACGTTTA TERM 5729 4299126 - 4299093 - f 100 -18.4 -3.13412 | opp_overlap 4299097, overlap 4299089 AATTGAAGAAATAAT TTAATGCGCATCGG TTTAAG CCGATGCGCATTAA TTCAAACTGCCCACG TERM 5730 4299097 - 4299122 + F 100 -15.5 -3.34895 | opp_overlap 4299093 4299089 GAAGAAATAATTTAA TGCGCATCGGT TTAA GCCGATGCGCA TTAATTCAAACTGCC TERM 5731 4299704 - 4299718 + GF 73 -4.2 -4.86133 | overlap 4299706 CGTCTGTGGGTATTA TGCTGG CAA CCGGTA TTTTTGCTCTCTGTA TERM 5732 4300142 - 4300170 + GF 76 -7.4 -4.26832 | AAAGTCTGTATTTGT CGGGAGCAGGAT TTTGT GTCCTGTTCGCG TTTCCTTTCTTCTTA ECS88_4328 4299190 - 4300539 + | putative transport protein (shikimate homolog) ECS88_4329 4300472 - 4301416 + | conserved hypothetical protein, putative Galactose mutarotase and related enzymes yihX 4301557 - 4302156 + | putative hydrolase rbn 4302150 - 4303022 + | conserved hypothetical protein; putative inner membrane protein dtd 4303019 - 4303456 + | D-tyr-tRNA(Tyr) deacylase yiiD 4303453 - 4304442 + | putative acetyltransferase TERM 5733 4304483 - 4304465 - T 85 -10.4 -4.1899 | opp_overlap 4304465 TTACTTGACTGAAAA GGTTTTCA ATC TGAAAACC TTTTCTGGGCCCTGG TERM 5734 4304465 - 4304483 + T 87 -10.4 -4.37886 | opp_overlap 4304465 TTACTTGACTGAAAA GGTTTTCA ATC TGAAAACC TTTTCTGGGCCCTGG ECS88_4334 4305489 - 4304506 - | putative lipase ECS88_4335 4305643 - 4305954 + | hypothetical protein ECS88_4336 4305955 - 4306245 + | conserved hypothetical protein, putative transcriptional regulator TERM 5735 4306286 - 4306322 + F 85 -9.3 -4.34402 | opp_overlap 4306286 4306297 CACCAGCATTCAGAA CTCCTATGAAAGCGGCA TAG TGCCGCCTGCTCAGGAG TTTTGCTATGACCCG TERM 5736 4306322 - 4306286 - f 100 -13.7 -3.38272 | opp_overlap 4306286, overlap 4306297 CACCAGCATTCAGAA CTCCTATGAAAGCGGCA TAG TGCCGCCTGCTCAGGAG TTTTGCTATGACCCG TERM 5737 4306311 - 4306297 - f 91 -11.4 -3.75015 | opp_overlap 4306286, overlap 4306286 AGAACTCCTATGAAA GCGGCA TAG TGCCGC CTGCTCAGGAGTTTT ECS88_4337 4306604 - 4306882 + | hypothetical protein TERM 5738 4306890 - 4306918 + F 85 -11.7 -3.37975 | opp_overlap 4306891, overlap 4306878 4306891 4306893 ACTACTAACAATTAA AGACCGGTTGGTG CGG CACTGACCGGTCG TTATGAATGGTAGAT TERM 5739 4306917 - 4306891 - f 86 -10.8 -4.09805 | opp_overlap 4306890 4306878 4306891 4306893 CTACTAACAATTAAA GACCGGTTGGTG CGG CACTGACCGGTC GTTATGAATGGTAGA TERM 5740 4306891 - 4306917 + F 93 -15.2 -2.62463 | opp_overlap 4306891, overlap 4306890 4306878 4306893 CTACTAACAATTAAA GACCGGTTGGTG CGG CACTGACCGGTC GTTATGAATGGTAGA TERM 5741 4306893 - 4306915 + F 80 -12 -2.85216 | opp_overlap 4306891, overlap 4306891 4306890 4306878 ACTAACAATTAAAGA CCGGTTGGTG CGG CACTGACCGG TCGTTATGAATGGTA yiiE 4307278 - 4307496 + | putative transcriptional regulator fdhE 4308641 - 4307712 - | formate dehydrogenase formation protein TERM 5742 4308589 - 4308570 - G 86 -10.7 -3.97307 | opp_overlap 4308570 4308567 CCGAGGGAACAATAA CGGCGGA ATCATA TCCGCCG TACGTTTCTCGCTCG TERM 5743 4308570 - 4308589 + g 70 -10.7 -2.71325 | opp_overlap 4308570, overlap 4308567 CCGAGGGAACAATAA CGGCGGA ATCATA TCCGCCG TACGTTTCTCGCTCG fdoI 4309273 - 4308638 - | formate dehydrogenase-O, cytochrome b556 subunit fdoH 4310172 - 4309270 - | formate dehydrogenase-O, Fe-S subunit TERM 5744 4309581 - 4309592 + g 70 -5.8 -4.28018 | overlap 4309578 GCTCCGCCACGCGCT CGCT CGCC AGCG TTTTCATCGACTCTT TERM 5745 4309962 - 4309987 + g 85 -11.3 -3.61715 | gap 1, opp_overlap 4309961 4309962 4309964 ATTTGGCACTTAAAT CATTGGGGTTGT CGT ACA-CCCCAATG TTATTGCCGACGGTA TERM 5746 4309987 - 4309962 - G 73 -11.3 -2.78798 | gap 1, opp_overlap 4309962, overlap 4309961 4309964 ATTTGGCACTTAAAT CATTGGGGTTGT CGT ACA-CCCCAATG TTATTGCCGACGGTA fdoG 4313235 - 4310185 - | formate dehydrogenase-O, large subunit TERM 5747 4312206 - 4312245 + g 75 -5.1 -4.60487 | overlap 4312212 4312215 4312220 TGGCGAAGCCGTTTT CGTCCAGTTCG-TAAGTCC AGGT GGACTTATCGTACTTG-CG TTTTTCCGCGTCGTA TERM 5748 4312779 - 4312789 + g 77 -8.2 -4.10657 | AGCGGTTAACAGTCA CGCC TTC GGCG TTTTGCGCAATGTAG fdhD 4313429 - 4314262 + | formate dehydrogenase formation protein TERM 5749 4314303 - 4314269 - f 82 -8 -4.50193 | opp_overlap 4314269 4314272 AGCAATTAATTAAAA TAAGTCCTGCGATATA TAT TAAATTACAGGACTTA TTCATTTCGTGAATT TERM 5750 4314304 - 4314316 + F 76 -2.7 -5.22104 | AAATTACAGGACTTA TTCAT TTC GTGAA TTTTGTTATTTTTTC ECS88_4347 4315392 - 4316786 + | putative glycoporin TERM 5751 4316821 - 4316793 - T 71 -10.2 -2.83403 | opp_overlap 4316792, overlap 4316792 TTCTTCTGATGAAAG GGCGGTGCTGGA TATTT TCCGGCACCGCA ACTCATTAAGGCAGG yiiL 4317141 - 4316827 - | L-rhamnose mutarotase rhaD 4317975 - 4317151 - | rhamnulose-1-phosphate aldolase TERM 5752 4318102 - 4318069 - R 74 -9.5 -3.34344 | opp_overlap 4318074, overlap 4318046 4318043 4318070 GCATCCGGCAATCAA TGCCTGATGCGACGC TGTC GCGTCTTATCAGGCC TACAACTGTTGCTGA TERM 5753 4318101 - 4318070 - R 84 -13 -2.60392 | opp_overlap 4318074, overlap 4318046 4318043 4318069 CATCCGGCAATCAAT GCCTGATGCGACGC TGTC GCGTCTTATCAGGC CTACAACTGTTGCTG TERM 5754 4318074 - 4318092 + r 80 -11 -3.30124 | opp_overlap 4318046 4318043 4318070 4318069 CGGCAATCAATGCCT GATGCGAC GCT GTCGCGTC TTATCAGGCCTACAA TERM 5755 4318194 - 4318161 - R 74 -9.5 -3.34344 | opp_overlap 4318166 4318180, overlap 4318138 4318135 4318162 GCATCCGGCAATCAA TGCCTGATGCGACGC TGTC GCGTCTTATCAGGCC TACAACTATTGCCGA TERM 5756 4318193 - 4318162 - R 84 -13 -2.60392 | opp_overlap 4318166 4318180, overlap 4318138 4318135 4318161 CATCCGGCAATCAAT GCCTGATGCGACGC TGTC GCGTCTTATCAGGC CTACAACTATTGCCG TERM 5757 4318166 - 4318184 + r 80 -11 -3.30124 | opp_overlap 4318138 4318135 4318162 4318161, overlap 4318180 CGGCAATCAATGCCT GATGCGAC GCT GTCGCGTC TTATCAGGCCTACAA rhaA 4319511 - 4318252 - | L-rhamnose isomerase TERM 5758 4318743 - 4318727 - G 74 -10.1 -3.53444 | TCAGTCGGGTGGAAA TGCCCGG CGT CCAGGCA CAGCGCTGTCTGGCG rhaB 4320977 - 4319508 - | rhamnulokinase rhaS 4321265 - 4322101 + | DNA-binding transcriptional activator, L-rhamnose-binding TERM 5759 4322621 - 4322595 - T 73 -10.1 -3.05596 | opp_overlap 4322595 GATTCCGGGATTTAA CGCCAGCGCAG GGCAA CCACACTGGCG TTTAGGTAGCGTGGG TERM 5760 4323075 - 4323100 + T 70 -10.5 -2.52464 | opp_overlap 4323072 4323071, overlap 4323080 TACCCGGGAAACCGG GATGACGCC CAGCCAGT GGCGTCATC TCAATTCGCAGAAAG rhaT 4324151 - 4323117 - | L-rhamnose:proton symporter sodA 4324436 - 4325056 + | superoxide dismutase, Mn TERM 5761 4325136 - 4325110 - f 79 -5 -5.0538 | opp_overlap 4325114, overlap 4325057 4325114 TTGCAGCTTAAAAAA TGAACCATCGCC AAC GGCGGTGGTTTT TTTGTGATCAATTTC TERM 5762 4325114 - 4325132 + F 100 -12.4 -5.67063 | opp_overlap 4325110 4325114 AGCTTAAAAAATGAA CCATCGCC AAC GGCGGTGG TTTTTTTGTGATCAA TERM 5763 4325132 - 4325114 - f 82 -10.2 -3.93769 | opp_overlap 4325114, overlap 4325110 AGCTTAAAAAATGAA CCATCGCC AAC GGCGGTGG TTTTTTTGTGATCAA TERM 5764 4325355 - 4325344 - g 72 -5.8 -4.42386 | opp_overlap 4325348 4325350 GCTCGATTGAGAAAA TCCC GGGG GGGA TGATGCTCGTCCCGC kdgT 4325316 - 4326299 + | 2-keto-3-deoxy-D-gluconate transporter TERM 5765 4326323 - 4326346 + F 100 -13.2 -4.30448 | CCTTAATCCCCACAG CCGGATGAAC TAAC GTTCGTCCGG TTTTCAATTGCGTTT yiiM 4326448 - 4327122 + | hypothetical protein TERM 5766 4327160 - 4327146 - T 76 -10 -3.30124 | opp_overlap 4327149, overlap 4327149 GTGTAGGCCTGATAA GACGCT ATC AGCGTC GCATCAGGCATCCTG TERM 5767 4327238 - 4327220 - T 75 -8.8 -3.86015 | opp_overlap 4327221, overlap 4327221 TATCCTGCCTACAAA TGCGGAGT TTA ACTCCGCT TATACAGCGGCAACC TERM 5768 4327237 - 4327221 - T 82 -12.3 -2.91395 | opp_overlap 4327221, overlap 4327220 ATCCTGCCTACAAAT GCGGAGT TTA ACTCCGC TTATACAGCGGCAAC TERM 5769 4327221 - 4327237 + T 90 -12.3 -3.28712 | opp_overlap 4327221 4327220 ATCCTGCCTACAAAT GCGGAGT TTA ACTCCGC TTATACAGCGGCAAC cpxA 4328601 - 4327228 - | sensory histidine kinase in two-component regulatory system with CpxR cpxR 4329296 - 4328598 - | DNA-binding response regulator in two-component regulatory system with CpxA cpxP 4329446 - 4329946 + | periplasmic protein combats stress TERM 5770 4329987 - 4330005 + F 100 -14.6 -5.9873 | CACCATCCCTGTCTT CCCCCACA TGA TGTGGGGG TTTTTTTTATCCTCA TERM 5771 4330619 - 4330633 + G 72 -10 -3.30106 | overlap 4330618 4330616 4330626 GTCCTGGTACGGCTG GCATCG CGC CGATGC TCTGTTTGCATTGGG fieF 4330095 - 4330997 + | zinc transporter TERM 5772 4331236 - 4331206 - g 76 -11.1 -3.28712 | opp_overlap 4331231, overlap 4331231 TCGGTGTGTTGACAA GCGGCGGTGATGC GCCAG GCATGAACGCCGC AATTCGCGGGGTTGT TERM 5773 4331466 - 4331454 - g 77 -3.3 -5.15117 | GAAAACCTGAAAAAA CGTGG GAT CGACG CGCTGGTGGTTATCG TERM 5774 4331834 - 4331823 - g 93 -5.8 -5.22039 | overlap 4331825 4331826 GCGAAAGGTAAAAAA CACG CGAT CGTG GCGATTACTGAACAT pfkA 4331178 - 4332140 + | 6-phosphofructokinase I TERM 5775 4332222 - 4332196 - f 100 -10.8 -4.96646 | opp_overlap 4332184 4332181 TGACAGAAGCAAAAA GGCCTGATGCGC TTC GCTTATCAGGCC TACATGAATTCTGTA TERM 5776 4332326 - 4332342 + F 91 -9.4 -4.72272 | opp_overlap 4332326 4332323 TTGTCAGCAATATGA GGCGGA TTTCT TCCGCC TTTTTAATCCCCCAA TERM 5777 4333232 - 4333216 - g 84 -3.6 -5.24129 | overlap 4333218 4333227 GTGGTCGAGAAAAAA GGCACC AAAGA GGTGGC GGAAGCCTACCTGAA sbp 4332460 - 4333449 + | sulfate transporter subunit ; periplasmic-binding component of ABC superfamily TERM 5778 4333472 - 4333494 + F 100 -9.1 -5.72622 | opp_overlap 4333472 4333471 AGGATAATTATCAAG CCCGGTGGT TTCTC GCCACTGGG TTTTTTATTTGTCAC cdh 4333556 - 4334311 + | CDP-diacylglycerol phosphotidylhydrolase TERM 5779 4334356 - 4334334 - T 100 -13.5 -3.56972 | overlap 4334330 AGTTTAGGAAAGTAA GTGCCGGAT ATGAA ATCCGGCAC CTGTCAGACTTAAGC tpiA 4335133 - 4334366 - | triosephosphate isomerase yiiQ 4335840 - 4335241 - | hypothetical protein TERM 5780 4335833 - 4335820 - G 88 -2.3 -5.53436 | ACATAAGAGAAAAAA CAGCG TACA CCCTG GCTTCATTGACAGTA yiiR 4335941 - 4336381 + | conserved hypothetical protein; putative inner membrane protein TERM 5781 4336409 - 4336456 + F 87 -13.8 -2.84566 | gap 1, overlap 4336406 CTCTTATCGCTATTT TTTTCCGGG-ATTGTTATTTCCA CGA TGCAAGTGACAATGCCCGGAAAA TCCTTCTGAACTCTT yiiS 4336593 - 4336892 + | hypothetical protein TERM 5782 4337111 - 4337089 - g 76 -10.8 -3.41024 | opp_overlap 4337083, overlap 4337084 4337087 CCCTGCAACAGAAGA TATTCTTCAA TTG TTGAAGAATA AGTCGGATAACAAGC TERM 5783 4337184 - 4337168 - g 70 -3.6 -4.66537 | overlap 4337163 4337170 TGGCCGAAGACAAAA CTGCGT ATTGA ACGCGG AGAAATGCCGGAAAC yiiT 4336919 - 4337347 + | stress-induced protein fpr 4338098 - 4337352 - | ferredoxin-NADP reductase TERM 5784 4337822 - 4337808 - G 81 -10 -3.97947 | overlap 4337811 4337815 TTCATCCAGCACAAA GAAGCC AGC GGCTTC GCTAACCACCTGCAC TERM 5785 4338174 - 4338153 - R 100 -13.1 -5.7946 | CTCCGAACAAAAAAA TTCCAGTCC CGAA GGACTGGAA GGCTCAATCGATCAA glpX 4339205 - 4338195 - | fructose 1,6-bisphosphatase II TERM 5786 4339098 - 4339116 + g 95 -9.5 -4.83169 | opp_overlap 4339085 4339084 ACGCATGGCGTTTAC CGCCGCG CCGTC CGCGGTG TTTTTATCGCCGCGT TERM 5787 4339270 - 4339293 + r 78 -10.2 -3.5944 | overlap 4339271 GGCGGGATTATTGAT GTGTGCGGGG TTGC CCCCGCACGG TTTCAGAGTCTGCGT TERM 5788 4339271 - 4339292 + r 86 -13.7 -2.75343 | overlap 4339270 GCGGGATTATTGATG TGTGCGGGG TTGC CCCCGCACG GTTTCAGAGTCTGCG glpK 4340884 - 4339376 - | glycerol kinase TERM 5789 4339404 - 4339417 + g 74 -3.1 -5.02074 | gap 1 TCTTCCCATGCCATC GCGCGT TTG AC-CGC TTTTTTCCAGCCTGC TERM 5790 4339858 - 4339868 + g 72 -6.8 -4.25074 | opp_overlap 4339858, overlap 4339866 CCGGAACCACATACA CACC ATT GGTG TTTTGCACTTTGGTG glpF 4341752 - 4340907 - | glycerol facilitator TERM 5791 4342303 - 4342287 - g 74 -2.9 -5.01858 | GAAAGAAAAAAACAA CTCACTG TCG CAGGAAG TTCAAAATGCCCAGC yiiU 4342177 - 4342422 + | hypothetical protein TERM 5792 4342506 - 4342477 - T 81 -12.3 -2.57067 | opp_overlap 4342477 4342484, overlap 4342484 CCAACAGGTAACGCA GAAAAAAGGCACC TTGC GGTGCCTTTTTTA TCATTCAATATCCAG TERM 5793 4342477 - 4342506 + T 82 -12.3 -2.77182 | opp_overlap 4342477 4342484, overlap 4342484 CCAACAGGTAACGCA GAAAAAAGGCACC TTGC GGTGCCTTTTTTA TCATTCAATATCCAG TERM 5794 4342484 - 4342499 + T 100 -10.4 -5.37345 | opp_overlap 4342477 4342484, overlap 4342477 GTAACGCAGAAAAAA GGCACC TTGC GGTGCC TTTTTTATCATTCAA TERM 5795 4342499 - 4342484 - T 100 -10.4 -5.31456 | opp_overlap 4342484 4342477, overlap 4342477 GTAACGCAGAAAAAA GGCACC TTGC GGTGCC TTTTTTATCATTCAA rraA 4342992 - 4342507 - | ribonuclease E (RNase E) inhibitor protein menA 4344011 - 4343085 - | 1,4-dihydroxy-2-naphthoate octaprenyltransferase TERM 5796 4344047 - 4344030 - R 93 -9.1 -5.06816 | opp_overlap 4344017, overlap 4344017 ACGCGCCAATAAAAA TGGGGCC TTTC AGCCCCA TCAAACAATGATGAA hslU 4345409 - 4344078 - | molecular chaperone and ATPase component of HslUV protease TERM 5797 4344578 - 4344542 - G 74 -10.1 -3.53224 | CATGTTTGGTGGAAA CAGTGCAACCTTCTACC AGC GGCAGCAGGTCACGCTG AACGCCTTCACGAGA hslV 4345949 - 4345419 - | peptidase component of the HslUV protease TERM 5798 4346004 - 4345985 - R 100 -13.6 -4.05991 | opp_overlap 4345983, overlap 4345976 4345974 4345978 AATACAGAGTACAAA CCCCGTAC AAAA GTACGGGG CATAATGTAATTATA ftsN 4347001 - 4346042 - | essential cell division protein TERM 5799 4346458 - 4346469 + g 70 -5.8 -4.21974 | overlap 4346468 GCGACGTACGCGTCT GCTG CTGC CAGC TTTGTTCAGTCGTAC TERM 5800 4346551 - 4346573 + g 70 -11.2 -2.71011 | overlap 4346545 4346556 GGCGCTGTAGCGTTT GCTGACGCTG TTC CGGCGTCTGC TCATTCCACGGAACT cytR 4348118 - 4347093 - | DNA-binding transcriptional dual regulator priA 4350472 - 4348274 - | Primosome factor n' (replication factor Y) TERM 5801 4348768 - 4348755 - G 74 -8.1 -4.10453 | overlap 4348744 TAAAGCTGGGCAAAA CGCTC CGCC GAGCG GAAATCGGCAGAAAA rpmE 4350675 - 4350887 + | 50S ribosomal subunit protein L31 TERM 5802 4350907 - 4350920 + T 100 -9.5 -5.64274 | opp_overlap 4350907 GGATTTCCGAAAAAA GCGCC GTAC GGCGC TTTTTTTGTGCCTGA TERM 5803 4350920 - 4350907 - T 93 -9.5 -5.02074 | opp_overlap 4350907 GGATTTCCGAAAAAA GCGCC GTAC GGCGC TTTTTTTGTGCCTGA yiiX 4351556 - 4350948 - | putative peptidoglycan peptidase TERM 5804 4351604 - 4351582 - R 73 -2.6 -5.1675 | gap 1, opp_overlap 4351582 4351580 CCATGTATGAAAAAA GCGGC-TGG TTAACT CCGCGCCGC TCTTTTCCGCTTTAG metJ 4352071 - 4351616 - | DNA-binding transcriptional repressor, S-adenosylmethionine-binding TERM 5805 4352510 - 4352566 + G 76 -7.4 -4.24413 | gap 2, opp_overlap 4352549, overlap 4352513 4352514 4352544 GCGCCGCACGACTGC TACGGCGGTAGCTATCGCCTGTTCGACA GCC TGGCGAA-ACGCGGTTGCTATCGC-GTG TTGTTTGTTGATCAA TERM 5806 4352514 - 4352563 + G 73 -11.5 -2.81784 | gap 1, opp_overlap 4352549, overlap 4352513 4352510 4352544 CGCACGACTGCTACG GCGGTAGCTATCGCCTGTTCGACA GCC TGGCGAA-ACGCGGTTGCTATCGC GTGTTGTTTGTTGAT TERM 5807 4352544 - 4352569 + G 70 -6.1 -4.24342 | opp_overlap 4352549, overlap 4352514 4352513 4352510 TGTTCGACAGCCTGG CGAAACGCGGT TGCT ATCGCGTGTTG TTTGTTGATCAAGGC metB 4352210 - 4353370 + | cystathionine gamma-synthase, PLP-dependent TERM 5808 4354856 - 4354884 + G 74 -11 -3.23274 | gap 1, overlap 4354852 TTGAATTTGTGCTGG CAGGC-GTGGTGG ACAG CCGCCGCAGCCTG TTGAGTTATGACGGG metL 4353373 - 4355805 + | fused aspartokinase II ; homoserine dehydrogenase II TERM 5809 4355817 - 4355842 + T 100 -16.3 -3.30124 | opp_overlap 4355817 4355822, overlap 4355822 GTAGTGATTATTGAA CAAAAGCTGGC AGTT GCCAGCTTTTG TTGTCACCCCTAAAC TERM 5810 4355842 - 4355817 - T 100 -16.3 -3.10164 | opp_overlap 4355817 4355822, overlap 4355822 GTAGTGATTATTGAA CAAAAGCTGGC AGTT GCCAGCTTTTG TTGTCACCCCTAAAC TERM 5811 4355822 - 4355837 + T 91 -10.4 -4.77165 | opp_overlap 4355817 4355822, overlap 4355817 GATTATTGAACAAAA GCTGGC AGTT GCCAGC TTTTGTTGTCACCCC TERM 5812 4355837 - 4355822 - T 91 -10.4 -4.69053 | opp_overlap 4355822 4355817, overlap 4355817 GATTATTGAACAAAA GCTGGC AGTT GCCAGC TTTTGTTGTCACCCC TERM 5813 4355875 - 4355857 - T 72 -8.8 -3.57144 | opp_overlap 4355857 4355854 GTTGTCACCCCTAAA CCTCTTCC TGG GGAAGTGG TGATTGATTGTCATT TERM 5814 4355906 - 4355925 + T 85 -7.8 -4.66537 | TTGCCTTTGGTCAGT GCCCCC GGTAATAA GGGGGC TTTTGTGTTGAGCGA tsx 4356883 - 4356023 - | nucleoside channel, receptor of phage T6 and colicin K TERM 5815 4356785 - 4356807 + g 70 -3.5 -4.58773 | AATGACATTCAAGCT TTGATGTAA CCAGC TTTCATCAA TTTTAATTTCCTGAG ECS88_4393 4358585 - 4356960 - | putative 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases TERM 5816 4357530 - 4357550 + g 85 -3.2 -5.45652 | overlap 4357531 TGATTCACCGACTGG TTGGCGTA CAAGA TCCGCCAG TTTTTTATTCCAGCT ECS88_4394 4360173 - 4358620 - | putative 5'-nucleotidase TERM 5817 4359767 - 4359786 + g 72 -4.3 -4.70319 | opp_overlap 4359767, overlap 4359774 TCGGTGTAGTAGATA TTTCCCA GCAGAA TGGGGAA TTTTGCTTTTGATAA TERM 5818 4360221 - 4360233 + r 70 -5.5 -4.38141 | opp_overlap 4360221, overlap 4360218 ATTATTTAAATAAAA GGCAC ATC GTGTC TTATTTTATGTAAGC TERM 5819 4360233 - 4360221 - R 72 -3.3 -4.9138 | opp_overlap 4360221 4360218 ATTATTTAAATAAAA GGCAC ATC GTGTC TTATTTTATGTAAGC ECS88_4395 4361527 - 4360403 - | hypothetical protein ECS88_4396 4361654 - 4363213 + | putative phosphoesterase metF 4363595 - 4364485 + | 5,10-methylenetetrahydrofolate reductase TERM 5820 4364560 - 4364598 + F 70 -10.4 -2.60392 | overlap 4364557 4364562 4364571 GCTGCCTCGAAATGA GGGCGGGAAAATAAGGTT ATC AGCCTTGTTTTCTCCCTC ATTACTTGAAGGATA TERM 5821 4364562 - 4364596 + F 70 -9.4 -2.84098 | overlap 4364560 4364557 4364571 TGCCTCGAAATGAGG GCGGGAAAATAAGGTT ATC AGCCTTGTTTTCTCCC TCATTACTTGAAGGA katG 4364814 - 4366994 + | catalase/hydroperoxidase HPI(I) TERM 5822 4367004 - 4367036 + F 100 -19.3 -4.41616 | CTGTAATCTGACCTT CTTCAGCGACTGCCT TTC ATGCAGTCGCTGAAG TTTCTTTACCGGCGT TERM 5823 4367484 - 4367495 + G 77 -7.2 -4.53398 | TTCGCGATACTGATT GCCG CTTT CGGC TTATTTTTGGTGTTG yijE 4367088 - 4367993 + | putative permease yijF 4368637 - 4368020 - | hypothetical protein TERM 5824 4368743 - 4368729 - R 95 -3.5 -5.63504 | AAGCGGATAAAAAAA CACCC GAACA AGGTG GAAGTTTCAGATTAC TERM 5825 4368871 - 4368912 + r 77 -9.6 -3.65201 | gap 1, opp_overlap 4368883, overlap 4368876 4368883 AGCGCATCAGGCAAT TTTGCGTTCAAACTCCCGG ACAAG CCGGGAGTTTGGA-GTAGG TTATTCCCACTCTTG TERM 5826 4368876 - 4368908 + r 81 -12.8 -2.65808 | opp_overlap 4368883, overlap 4368871 4368883 ATCAGGCAATTTTGC GTTCAAACTCCCGG ACAAG CCGGGAGTTTGGAG TAGGTTATTCCCACT TERM 5827 4368901 - 4368883 - R 88 -11.7 -3.53343 | opp_overlap 4368876 4368871 4368883 AATTTTGCGTTCAAA CTCCCGG ACAAG CCGGGAG TTTGGAGTAGGTTAT TERM 5828 4368883 - 4368901 + r 89 -11.7 -3.62418 | opp_overlap 4368883, overlap 4368876 4368871 AATTTTGCGTTCAAA CTCCCGG ACAAG CCGGGAG TTTGGAGTAGGTTAT gldA 4370016 - 4368913 - | glycerol dehydrogenase, NAD fsaB 4370689 - 4370027 - | fructose-6-phosphate aldolase 2 TERM 5829 4370204 - 4370192 - G 71 -9.1 -3.53091 | ACGTGGTGTTTTAAA GCTGG CAG CCAGC ACCATGCTTTCTGGC ptsA 4373202 - 4370701 - | fused putative PTS enzymes: Hpr component ; enzyme I component ; enzyme IIA component TERM 5830 4371638 - 4371651 + g 87 -4.5 -5.27335 | overlap 4371639 TTACGCAGTTGCTGT TTGGC TTCC GCCAG TTTTTCTTTCACCCA TERM 5831 4371791 - 4371763 - G 74 -8.2 -3.90744 | opp_overlap 4371742 4371742, overlap 4371785 TTGTGTGGTAAACAA CGACGCGTATTC TTCAT AAATACGCACCG CGCGATAACCGAGGA TERM 5832 4373046 - 4373057 + g 72 -7.2 -4.19506 | opp_overlap 4373046 TATCGGTGCCAATCA GCGC AAGG GCGC TTTTGGCGTTGCCCT frwC 4373511 - 4374590 + | enzyme IIC component of PTS frwB 4374605 - 4374925 + | putative enzyme IIB component of PTS TERM 5833 4374934 - 4374951 + F 95 -14.1 -3.27525 | overlap 4374929 CGCTTAAGTTCTTAT CCCGCCC GCAA GGGCGGG TTCGCTTTCCCACAG TERM 5834 4375363 - 4375339 - gf 81 -6.6 -4.59773 | gap 1, opp_overlap 4375316 CCGTACTGGGAAAAA CGTTCGATGAA AGAT TTCATC-AACG GGCAGATGACGGATG TERM 5835 4375707 - 4375722 + GF 77 -9 -3.8512 | opp_overlap 4375696 4375695 TAAGCCGCAGACGTT CTGGCA GGCG TGCCAG TTATTCTGGTACATG pflD 4374976 - 4377273 + | putative formate acetyltransferase 2 (pyruvate formate lyase II) TERM 5836 4377283 - 4377308 + GF 70 -6.7 -4.14392 | opp_overlap 4377285, overlap 4377284 CTGTAACGTTGTGGA AACGCGCCGCA ATGA TGTGGCGCGCA TTTTCAACATTCAGC TERM 5837 4377284 - 4377307 + GF 73 -10.2 -3.08314 | opp_overlap 4377285, overlap 4377283 TGTAACGTTGTGGAA ACGCGCCGCA ATGA TGTGGCGCGC ATTTTCAACATTCAG TERM 5838 4377306 - 4377285 - gf 85 -11.5 -3.54459 | opp_overlap 4377284 4377283 GTAACGTTGTGGAAA CGCGCCGCA ATGA TGTGGCGCG CATTTTCAACATTCA TERM 5839 4377494 - 4377508 + GF 85 -11.4 -3.55801 | opp_overlap 4377494 CGTGATGCGGATGAA TGCCCC TCC GGGGCA TTTGAACGGATTGGT TERM 5840 4377508 - 4377494 - gf 81 -11.4 -3.15544 | opp_overlap 4377494 CGTGATGCGGATGAA TGCCCC TCC GGGGCA TTTGAACGGATTGGT pflC 4377239 - 4378117 + | pyruvate formate lyase II activase frwD 4378119 - 4378460 + | enzyme IIB component of PTS yijO 4379298 - 4378447 - | putative DNA-binding transcriptional regulator TERM 5841 4378951 - 4378975 + g 74 -6.3 -4.52347 | opp_overlap 4378934 4378931, overlap 4378945 4378947 AATGCGCGGGCCGCG TCGGGCGACGT GTT GCTTCGCCAGA TTTTGATATTGTTTG TERM 5842 4379372 - 4379352 - R 91 -7.6 -5.1861 | gap 1, overlap 4379336 GGCATTATGAAAAAA GGCCAC-CT GAAA AGTGTGGCC TGATGGGAGTTCGAT TERM 5843 4379483 - 4379439 - R 100 -12.9 -3.53811 | overlap 4379440 4379480 CGGATGCGGCGTAAA TGCCTTACCCGGCCTACCG CCGCGAT CTGTAGGCCGGATAAGACG CGTCAAGCGTCGCAT TERM 5844 4379482 - 4379440 - R 100 -16.4 -2.72144 | overlap 4379439 4379480 GGATGCGGCGTAAAT GCCTTACCCGGCCTACCG CCGCGAT CTGTAGGCCGGATAAGAC GCGTCAAGCGTCGCA TERM 5845 4379534 - 4379578 + r 74 -2.2 -5.18726 | gap 2, overlap 4379539 GATAATTACTGATTA CCCACCTGATCGCCATACGGCA GAG TGTCGTAAT-CGATCAG-TGCG TTTTTCTTATACGGG yijP 4381257 - 4379524 - | conserved hypothetical protein; putative inner membrane protein TERM 5846 4381205 - 4381189 - G 75 -4.3 -4.84033 | opp_overlap 4381199, overlap 4381192 AGAGAAAAACCAAAA GTAGAGC AGT GCCCAAC CCAGGGCTTTCCAGC TERM 5847 4381401 - 4381422 + r 85 -11.5 -3.53012 | opp_overlap 4381401 AAGTATTTCAGAAAA CCCTCGCGC AAAA GCACGAGGG TTTGCAGGAGAGGAA TERM 5848 4381422 - 4381401 - R 100 -13.7 -4.41206 | opp_overlap 4381401 AAGTATTTCAGAAAA CCCTCGCGC AAAA GCACGAGGG TTTGCAGGAGAGGAA ppc 4384091 - 4381440 - | phosphoenolpyruvate carboxylase TERM 5849 4384343 - 4384376 + r 72 -8.1 -3.94188 | opp_overlap 4384353 4384355, overlap 4384344 AACACCAAAGGTGTA GGTCGGATAAGATGC GCAA GCATCGCATCCGACA TTGTTTGGCCTACGT TERM 5850 4384344 - 4384375 + r 78 -11.6 -2.96031 | opp_overlap 4384353 4384355, overlap 4384343 ACACCAAAGGTGTAG GTCGGATAAGATGC GCAA GCATCGCATCCGAC ATTGTTTGGCCTACG argE 4385544 - 4384393 - | acetylornithine deacetylase TERM 5851 4384472 - 4384489 + g 72 -9.9 -3.33696 | opp_overlap 4384468 GTCTCCAGATATTCA TCAGGCT GATG AGCCTGA TTAATTGAGCCAGGC TERM 5852 4385622 - 4385604 - H 71 -2.4 -5.14163 | ATTTATGAATAAAAA TACACTAA CGT TGAGCGTA ATAAAACCCACCAGC argC 4385698 - 4386702 + | N-acetyl-gamma-glutamylphosphate reductase, NAD(P)-binding TERM 5853 4386982 - 4386969 - g 71 -2.3 -4.90525 | GAACGGCAAATAAAA CCCTG CTGG CATGG GCGAAGAAGCATCAG argB 4386713 - 4387486 + | acetylglutamate kinase TERM 5854 4388874 - 4388858 - g 76 -7.9 -4.25848 | overlap 4388859 AAGCGTGCAGCAAAA GGCGGTG TCT CACCGCA ACAGGTGGCGCAGGC TERM 5855 4388873 - 4388859 - g 77 -11.4 -3.15027 | overlap 4388858 AGCGTGCAGCAAAAG GCGGTG TCT CACCGC AACAGGTGGCGCAGG argH 4387547 - 4388920 + | argininosuccinate lyase TERM 5856 4388952 - 4388996 + F 71 -10.2 -2.72144 | opp_overlap 4388994, overlap 4388951 CCCTGAAAATGGGGA G-CTTACCACGCCTACAAAGTG TGA CACTTCGTAGGCG-GATAAGGC GTTTACGCCGCATCA TERM 5857 4389291 - 4389307 + F 100 -3.7 -5.65496 | TTTTTGAGGGTGTTT TTTCTCC TCG GTAGAAA TTTTTATTTTTAATG TERM 5858 4389950 - 4389940 - g 74 -8.2 -3.98113 | GAACCAGCAACCAAA GGCC TGT GGCC AGAAGAGCAGTTGTG TERM 5859 4390389 - 4390403 + G 76 -7.8 -4.1721 | ATCGCCTGTTTGTCA TGCGGC GGC GCTGCA TTTTGACCTCTGGGT rspA 4389418 - 4390632 + | putative enolase/dehydratase TERM 5860 4391067 - 4391079 + G 78 -9.1 -3.91897 | TATCGGTCTGGGTAT TGGCG AAG CGCCA TTTATGCCTGCGGGA TERM 5861 4391821 - 4391839 + G 83 -6.1 -4.95957 | TCCATCGCCGGGATT CAAAACT TTGGC AGTTTTG TTTTTGCTTCCTTTG ECS88_4417 4390699 - 4391982 + | Putative transporter TERM 5862 4392048 - 4392030 - f 100 -11 -6.17268 | GTAGAATAAAAAAAA GCGGATCC TGG AGATCCGC AAAAGTTCACGTTGG oxyR 4392234 - 4393151 + | DNA-binding transcriptional dual regulator sthA 4394534 - 4393134 - | pyridine nucleotide transhydrogenase, soluble TERM 5863 4394717 - 4394728 + H 86 -2.2 -5.68489 | gap 1 TGATAGTTTTATCTT GC-CG AAG CGTGC TTTTTTGTTATTGTC TERM 5864 4395358 - 4395373 + G 83 -5.4 -5.06816 | opp_overlap 4395352, overlap 4395359 GCACAACATGCCGGG TTTGCC GGTC GGCAAG TTTTTCTTCCAGCCT ECS88_4420 4394864 - 4396030 + | Hippurate hydrolase (Benzoylglycine amidohydrolase) (Hippuricase) TERM 5865 4396127 - 4396114 - g 74 -2.3 -5.07486 | opp_overlap 4396116, overlap 4396115 4396116 GAGTGTGAAGAAAAA GCCCA GCGG CAGGC GGGTGATCTTTGCCT TERM 5866 4396670 - 4396681 + G 93 -3.6 -5.46657 | ATGGCAGAATGGGGC TGGC GTGT GCCG TTTTTTATTGGCGTG TERM 5867 4396783 - 4396772 - g 95 -5.8 -5.4505 | GTGCGCAATAAAAAA GCTG CTAC CAGC GAAAGCGCGTTTTCT ECS88_4421 4396073 - 4397389 + | putative proton/ carboxylic acid permease TERM 5868 4397541 - 4397527 - g 100 -2.7 -6.01725 | opp_overlap 4397536 AACAAAAAGAAAAAA CCCGC CGTTC GCTGG TGGAAGCCGCATTTA fabR 4397439 - 4398143 + | DNA-binding transcriptional repressor yijD 4398143 - 4398502 + | conserved hypothetical protein; putative inner membrane protein TERM 5869 4398508 - 4398539 + T 100 -15.2 -4.41494 | overlap 4398509 4398510 TGCTGAGTAATCGGT ATCATGCCGGATGC AAGC GCATCCGGCATGGG TTTTACTTCGCGGTC TERM 5870 4398509 - 4398538 + T 100 -18.7 -3.24414 | overlap 4398508 4398510 GCTGAGTAATCGGTA TCATGCCGGATGC AAGC GCATCCGGCATGG GTTTTACTTCGCGGT TERM 5871 4398510 - 4398537 + T 100 -20 -2.54166 | overlap 4398509 4398508 CTGAGTAATCGGTAT CATGCCGGATGC AAGC GCATCCGGCATG GGTTTTACTTCGCGG trmA 4399642 - 4398542 - | tRNA (uracil-5-)-methyltransferase TERM 5872 4398606 - 4398633 + g 74 -9.8 -3.45839 | opp_overlap 4398604 4398602 4398606, overlap 4398600 AACTGATCAAATAGA GCCAGACGTTCG ACCT TGTGCGTCTGGC TTAATGTTTCCAGAT btuB 4400011 - 4401855 + | vitamin B12/cobalamin outer membrane transporter TERM 5873 4401863 - 4401898 + GF 100 -14 -3.41125 | gap 1, opp_overlap 4401860, overlap 4401865 CCTTCTGAACCACGT CCCACCG-TGCTGGTGT TTG ACTCCGGCGTCGGTGGG TTGTCGGTCTATGAC TERM 5874 4402598 - 4402646 + GF 85 -10.4 -4.18094 | gap 1, opp_overlap 4402595 4402598, overlap 4402599 GAAGCTGAACAATTA TTGCCCGTTTTAC-AGCGTTACG GCTT CGAAACGCTCGAAAAACTGGCAG TTTTAGGCTGATTTG TERM 5875 4402599 - 4402645 + GF 81 -11.7 -3.10134 | gap 1, opp_overlap 4402598 4402595, overlap 4402598 AAGCTGAACAATTAT TGCCCGTTTTAC-AGCGTTACG GCTT CGAAACGCTCGAAAAACTGGCA GTTTTAGGCTGATTT murI 4401800 - 4402657 + | glutamate racemase TERM 5876 4404643 - 4404630 - f 74 -6.7 -4.41177 | overlap 4404634 GATAGAAAGTGAAAA GCAAG GCGT CTTGC GAAGCAGACTGATAC TERM 5877 4404869 - 4404845 - f 72 -8 -3.93061 | gap 1, opp_overlap 4404852 AGCTGAAAATTGAAA CACTGAACAAC GAGA GTTGTTC-GTG AGTCTCTCAAATTTT TERM 5878 4405423 - 4405411 - f 70 -6.2 -4.2354 | GAAAGGCGAAAAGAA CCCC GGCGA GGGG AGTGAAAAAGAACCT TERM 5879 4406724 - 4406713 - f 71 -4.4 -4.7254 | ACTGTTTATTAAAAA CACA GCAC TGTG CAAACACGAAAGTGG TERM 5880 4408054 - 4408088 + F 100 -15.9 -3.02966 | gap 1, opp_overlap 4408060, overlap 4408060 CAGGCATCAAATTTA GC-GAAAGGCCCAGTC GGAA GACTGGGCCTTTTTGC GTTTCTATAAACTCT TERM 5881 4408081 - 4408060 - f 100 -15.9 -3.70076 | opp_overlap 4408054 4408060 TCAAATTTAGCGAAA GGCCCAGTC GGAA GACTGGGCC TTTTTGCGTTTCTAT TERM 5882 4408060 - 4408081 + F 100 -15.9 -4.85433 | opp_overlap 4408060, overlap 4408054 TCAAATTTAGCGAAA GGCCCAGTC GGAA GACTGGGCC TTTTTGCGTTTCTAT murB 4408180 - 4409208 + | UDP-N-acetylenolpyruvoylglucosamine reductase, FAD-binding birA 4409205 - 4410170 + | bifunctional biotin-[acetylCoA carboxylase] holoenzyme synthetase and DNA-binding transcriptional repressor, bio-5'-AMP-binding TERM 5883 4410192 - 4410175 - T 90 -9.1 -4.80417 | opp_overlap 4410175 CAGAAAAATAAGAAA GGGGAGC ATTA ACTCCCC TTTAAATTATTTGCG TERM 5884 4410175 - 4410192 + T 76 -8.4 -3.89435 | opp_overlap 4410175 CAGAAAAATAAGAAA GGGGAG CATTAA CTCCCC TTTAAATTATTTGCG coaA 4411149 - 4410199 - | pantothenate kinase TERM 5885 4411751 - 4411739 - H 74 -7.7 -4.15222 | ACCGGCTCGAATAAA GAGAG CTT CTCTC GATATTCAGCGCAGA TERM 5886 4412113 - 4412097 - g 70 -4.4 -4.4715 | gap 1, opp_overlap 4412097 TTTGAACGTACAAAA CCGCACG TTAA CGT-CGG TACTATCGGCCACGT tufB 4412067 - 4413251 + | protein chain elongation factor EF-Tu (duplicate of tufA) TERM 5887 4413315 - 4413274 - f 89 -14.5 -3.0792 | opp_overlap 4413275 4413286, overlap 4413286 TAACATTTGACGCAA TGCGCACTAAAAGGGCATC ATTT GATGCCCTTTTTGCACGCT TTCGTACCAGAACCT TERM 5888 4413275 - 4413314 + F 100 -13.6 -3.72576 | opp_overlap 4413274 4413286, overlap 4413286 AACATTTGACGCAAT GCGCACTAAAAGGGCATC ATTT GATGCCCTTTTTGCACGC TTTCGTACCAGAACC TERM 5889 4413303 - 4413286 - f 93 -11.3 -4.2679 | opp_overlap 4413275 4413286, overlap 4413274 CAATGCGCACTAAAA GGGCATC ATTT GATGCCC TTTTTGCACGCTTTC TERM 5890 4413286 - 4413303 + F 100 -11.3 -4.60924 | opp_overlap 4413286 4413274, overlap 4413275 CAATGCGCACTAAAA GGGCATC ATTT GATGCCC TTTTTGCACGCTTTC TERM 5891 4413773 - 4413787 + G 73 -11.4 -2.65264 | CCACGCTGATTGTGG CTGCGG TTA CCGCAG TAATGTCACTGATCC secE 4413481 - 4413864 + | preprotein translocase membrane subunit nusG 4413866 - 4414411 + | transcription termination factor TERM 5892 4414446 - 4414428 - f 73 -3 -5.1675 | CCAGCGATCAAAAAA GCGGCGAT TTA ATCGTTGC ACAAGGCGCGAGATT TERM 5893 4414446 - 4414484 + F 100 -16.9 -4.8543 | opp_overlap 4414451, overlap 4414451 4414482 GCGATTTAATCGTTG CACAAGGCGCGAGATTG GAATA CAATTTCGCGCCTTTTG TTTTTATGGGCCTTG TERM 5894 4414479 - 4414451 - f 95 -13.2 -3.30159 | opp_overlap 4414446 4414451 TTAATCGTTGCACAA GGCGCGAGATTG GAATA CAATTTCGCGCC TTTTGTTTTTATGGG TERM 5895 4414451 - 4414479 + F 100 -15.4 -5.35224 | opp_overlap 4414451, overlap 4414446 TTAATCGTTGCACAA GGCGCGAGATTG GAATA CAATTTCGCGCC TTTTGTTTTTATGGG TERM 5896 4414482 - 4414511 + F 95 -7.3 -5.36441 | gap 1, overlap 4414446 4414485 ACAATTTCGCGCCTT TTGTTTTTATGGGC CTT GCCCGTA-AAACGA TTTTTTATATCACGG TERM 5897 4414894 - 4414871 - g 77 -8.2 -4.13343 | gap 1, overlap 4414863 ACAAAGTGGGTAAAA TTTCCCGC-GC TCA GCTGCAGGAAA TCGCGCAGACCAAAG rplK 4414570 - 4414998 + | 50S ribosomal subunit protein L11 TERM 5898 4415545 - 4415505 - g 74 -3.1 -4.98255 | opp_overlap 4415513 CCGTAACGACAAAAA CGGCATCATCCACACCACC ATC GGTAAAGTGGACTTTGACG CTGACAAACTGAAAG rplA 4415002 - 4415706 + | 50S ribosomal subunit protein L1 rplJ 4415998 - 4416495 + | 50S ribosomal subunit protein L10 rplL 4416562 - 4416927 + | 50S ribosomal subunit protein L7/L12 TERM 5899 4416967 - 4416992 + F 100 -17.7 -4.64766 | opp_overlap 4416960 4416958 4416957, overlap 4416938 AGAAATCAGGCTGAT GGCTGGTGACT TTTT AGTCACCAGCC TTTTTGCGCTGTAAG TERM 5900 4417701 - 4417711 + G 74 -2.4 -5.08824 | overlap 4417694 CCCAGCTGCACCGTA GTCC GGG GGTC TTTTTTGACTCCGAC TERM 5901 4418063 - 4418042 - g 75 -4.3 -4.87665 | gap 1 GTGTACGTAGAAAAA GGC-CGCCGC ATT ACTGCGCGCC ATATTCGCCAGCTGG TERM 5902 4420289 - 4420273 - g 86 -6.5 -5.10033 | overlap 4420274 CGAAGAGAAACAAAA TCAGCTG GAA CAGCTGG CTGAGCAGTATGACG TERM 5903 4420288 - 4420274 - g 77 -10 -3.64393 | overlap 4420273 GAAGAGAAACAAAAT CAGCTG GAA CAGCTG GCTGAGCAGTATGAC TERM 5904 4421177 - 4421167 - g 74 -3.2 -4.91459 | overlap 4421155 TAAGATGTATAAAAA CATC GTG GACG GCAACCATCAGATGG rpoB 4417247 - 4421275 + | RNA polymerase, beta subunit TERM 5905 4421294 - 4421323 + F 73 -9.2 -3.4252 | opp_overlap 4421312, overlap 4421295 TCGCTCAAACAGGTC ACTGCTGTCGGG GTAAAA CCCGGCAGCGGA TTGTGCTAACTCCGA TERM 5906 4421295 - 4421322 + F 81 -12.7 -2.65298 | opp_overlap 4421312, overlap 4421294 CGCTCAAACAGGTCA CTGCTGTCGGG GTAAAA CCCGGCAGCGG ATTGTGCTAACTCCG TERM 5907 4422692 - 4422708 + G 72 -7.9 -3.87373 | opp_overlap 4422681 4422691 4422688 CGAAGGTAAAGCTAT CCAGCTG CAC CCGCTGG TTTGTGCGGCATATA TERM 5908 4423187 - 4423203 + G 78 -7.9 -4.40561 | CTGCTACCGCATTCT CGGTCTG AAA CCGACCG TTATTTTTGCGGACC rpoC 4421352 - 4425575 + | RNA polymerase, beta prime subunit TERM 5909 4425602 - 4425615 + T 100 -9.5 -5.65177 | opp_overlap 4425602 CAAATAACGTAAAAA CCCGC TTCG GCGGG TTTTTTTATGGGTGT TERM 5910 4425615 - 4425602 - T 91 -9.5 -4.8384 | opp_overlap 4425602 CAAATAACGTAAAAA CCCGC TTCG GCGGG TTTTTTTATGGGTGT thiH 4426948 - 4425815 - | thiamin biosynthesis ThiGH complex subunit thiG 4427715 - 4426945 - | thiamin biosynthesis ThiGH complex subunit TERM 5911 4427195 - 4427181 - G 80 -11.4 -3.37796 | opp_overlap 4427190 TGCCAGCATCGACAA CCACCG GAA CGGTGG CCTGCTGGATAATAA thiS 4427917 - 4427717 - | sulphur carrier protein TERM 5912 4427765 - 4427743 - G 72 -4.9 -4.70626 | overlap 4427734 CAATAACCTGAAAAA GCAGGAT CTGGTCGCC ATCCTGC ACGATATGTTGCGCC thiF 4428656 - 4427901 - | thiamin (thiazole moiety) biosynthesis protein thiE 4429284 - 4428649 - | thiamin phosphate synthase (thiamin phosphate pyrophosphorylase) thiC 4431179 - 4429284 - | thiamin (pyrimidine moiety) biosynthesis protein rsd 4431888 - 4431412 - | stationary phase protein, binds sigma 70 RNA polymerase subunit TERM 5913 4432040 - 4432004 - g 75 -4.3 -4.78149 | opp_overlap 4432003, overlap 4432007 4432009 CGTATAATTGAAAAA TTAGATCACGGCTGGTG GGT CGTCAGCCATGAACAAA AATTATGGTTGCCGA nudC 4431983 - 4432756 + | NADH pyrophosphatase TERM 5914 4432914 - 4432929 + G 74 -6 -4.56358 | opp_overlap 4432911, overlap 4432915 AATATAAAGCCACGC GCGCCC AGGC GGGCGA TTTTATGTCGCTGTG hemE 4432796 - 4433860 + | uroporphyrinogen decarboxylase TERM 5915 4433957 - 4433945 - g 72 -7.7 -3.89822 | overlap 4433947 GATCGACTCGATAAA GATCC GCC GGATC TGATCGCCGGAGCCG TERM 5916 4434279 - 4434269 - g 74 -2.4 -5.08824 | opp_overlap 4434269 GGCGTAGCGAAAAAA CGGC TCT GCGG TAAATTCGAACCGCT nfi 4433870 - 4434541 + | endonuclease V yjaG 4434584 - 4435174 + | hypothetical protein hupA 4435361 - 4435633 + | HU, DNA-binding transcriptional regulator, alpha subunit TERM 5917 4435679 - 4435664 - g 72 -10.4 -3.35639 | opp_overlap 4435664 AACAGTTTTAACGAA GGGGTG GTTT CACCCC TTTTGTCTTTCTGGC TERM 5918 4435664 - 4435679 + G 100 -10.4 -4.84918 | opp_overlap 4435664 AACAGTTTTAACGAA GGGGTG GTTT CACCCC TTTTGTCTTTCTGGC yjaH 4435646 - 4436341 + | hypothetical protein zraP 4436762 - 4436343 - | Zn-binding periplasmic protein TERM 5919 4436865 - 4436892 + H 86 -7.8 -4.81083 | gap 1, opp_overlap 4436865 ATAAACGAGTAAAAA TGACTCGCCTGCT GCG GGTAG-CGAGTCA TTTTTACTCATTGAA TERM 5920 4436892 - 4436865 - H 80 -6.2 -4.85267 | opp_overlap 4436865 ATAAACGAGTAAAAA TGACTCGCCTGC TGCG GGTAGCGAGTCA TTTTTACTCATTGAA TERM 5921 4437198 - 4437236 + G 80 -11.6 -3.34013 | TCCGGCTCGCGCGTC GGCATGGGGATGCGCATG CAT CATGCGCAGCAGCAGGCC TTACTTGAAGAAATG zraS 4437000 - 4438376 + | sensory histidine kinase in two-component regulatory system with ZraR TERM 5922 4439047 - 4439018 - g 72 -4.9 -4.72272 | opp_overlap 4439042, overlap 4439019 4439020 4439042 TTCGGTCACGAAAAA GGGGCGTTTACCG GGGC CGACAAACGCCGG GAAGGGCGCTTTGTT TERM 5923 4439045 - 4439020 - g 73 -11.9 -2.65504 | opp_overlap 4439042, overlap 4439019 4439018 4439042 CGGTCACGAAAAAGG GGCGTTTACCG GGGC CGACAAACGCC GGGAAGGGCGCTTTG TERM 5924 4439649 - 4439622 - g 90 -10.4 -4.36914 | CGGCGCTGGAGAAAA CGGGCGGCAACA AAAC CGAAGCCGCCCG CCAGTTAGGGATCAC zraR 4438373 - 4439698 + | fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator ; sigma54 interaction protein purD 4440984 - 4439695 - | phosphoribosylglycinamide synthetase phosphoribosylamine-glycine ligase TERM 5925 4439803 - 4439776 - G 77 -11.3 -3.15249 | opp_overlap 4439783, overlap 4439783 GATATCGGTCATTAA GGCATAAGCGC GTTTCT GCGCTTCTGCC ACGGTATGACCCAGC purH 4442585 - 4440996 - | fused IMP cyclohydrolase ; phosphoribosylaminoimidazolecarboxamide formyltransferase TERM 5926 4442657 - 4442616 - H 100 -20.5 -2.96216 | opp_overlap 4442651 4442653, overlap 4442618 4442653 TTTGACTATTACAGA GAGCGTTAGCTGAATTTTT CGCG AAAAACTCAGCTAACGCCC CTAACGGGGCATCCT TERM 5927 4442655 - 4442618 - H 100 -19.5 -3.03443 | opp_overlap 4442651 4442653, overlap 4442616 4442653 TGACTATTACAGAGA GCGTTAGCTGAATTTTT CGCG AAAAACTCAGCTAACGC CCCTAACGGGGCATC TERM 5928 4442702 - 4442720 + H 74 -2.4 -5.20783 | opp_overlap 4442700, overlap 4442706 ATTGTAACGAAAACG TTTGCG CAACGCT CGCGAA TTTTTCTCTTTCAAT TERM 5929 4442989 - 4442975 - H 76 -4.2 -5.0916 | opp_overlap 4442975, overlap 4442976 4442983 GGTTGAAGAGAAAAA TCCTGA AAT TCAGGG TTGACTCTGAAAGAG TERM 5930 4443021 - 4443009 - H 72 -7.7 -4.00532 | CTCTGAAAGAGGAAA GCGTA ATA TACGC CACCTCGCGACAGTG TERM 5931 4444813 - 4444800 - H 74 -6.7 -4.41177 | overlap 4444804 GATAGAAAGTGAAAA GCAAG GCGT CTTGC GAAGCAGACTGATAC TERM 5932 4445039 - 4445015 - H 72 -8 -3.93061 | gap 1, opp_overlap 4445022 AGCTGAAAATTGAAA CACTGAACAAC GAGA GTTGTTC-GTG AGTCTCTCAAATTTT TERM 5933 4445593 - 4445581 - H 70 -6.2 -4.2354 | GAAAGGCGAAAAGAA CCCC GGCGA GGGG AGTGAAAAAGAACCT TERM 5934 4446894 - 4446883 - H 71 -4.4 -4.7254 | ACTGTTTATTAAAAA CACA GCAC TGTG CAAACACGAAAGTGG TERM 5935 4448248 - 4448228 - H 93 -9.6 -5.05228 | opp_overlap 4448228 ATCAAATTAGAAAAA CCCCGGTC AATAA GGCCGGGG TTTTTTGCATATCAA TERM 5936 4448228 - 4448248 + H 100 -11.8 -5.1287 | opp_overlap 4448228 ATCAAATTAGAAAAA CCCCGGTC AATAA GGCCGGGG TTTTTTGCATATCAA yjaA 4448289 - 4448672 + | hypothetical protein yjaB 4449179 - 4448736 - | putative acetyltransferase metA 4449336 - 4450265 + | homoserine transsuccinylase TERM 5937 4450311 - 4450326 + F 100 -10.4 -5.63517 | CAGCACCTTACCTCA GGCACC TTCG GGTGCC TTTTTTATTTCCGAA aceB 4450534 - 4452135 + | malate synthase A TERM 5938 4452369 - 4452354 - g 77 -3.2 -5.0538 | GGCGAGTCGAAAAAA GGCTAC ATCA ACAGCC TCGGTGCACTGACTG aceA 4452165 - 4453469 + | isocitrate lyase TERM 5939 4453502 - 4453477 - f 77 -10.3 -3.53712 | AGTTCTAACAACCAA CGCCCCTTTCC GTAA GGCGAGGGGCG AATTAAGGAGAGGCG TERM 5940 4453799 - 4453820 + G 70 -3.6 -4.62783 | opp_overlap 4453796 GTTGCCAGATTACCC GCGCTTCG AGATTG CGGAGAGC TTTTTCAACTCCGTG TERM 5941 4453855 - 4453878 + G 88 -5.2 -5.20783 | overlap 4453856 GTCGGTTATTTGACC ACCGCTCG CTTACTCC CGAGCGGC TTTTTATCTTTAGCT TERM 5942 4454168 - 4454180 + G 77 -3.3 -5.07486 | opp_overlap 4454161, overlap 4454169 ACTAATAACGCCTTC CGGCA CGT TGCCA TTTTTATTGCCGATC TERM 5943 4454734 - 4454719 - g 90 -6.8 -5.07053 | AAGCAGCGGAAAAAA TCACCG ATCT CGGCGA ACAAATTGTGATTCG TERM 5944 4454909 - 4454933 + G 74 -6.3 -4.54821 | overlap 4454912 ATTTAAAAACTTTGG CGTCACCCGTC ACG GGCGCGTGGTG TTTTATGATTACGAT aceK 4453518 - 4455242 + | isocitrate dehydrogenase kinase/phosphatase iclR 4456083 - 4455259 - | DNA-binding transcriptional repressor TERM 5945 4456107 - 4456121 + H 77 -3.6 -5.18726 | CCTTTTTCTGTATCG TGGAAA TCA TTTTCA TTTTTATTATCAGCG TERM 5946 4457436 - 4457420 - g 72 -6.5 -4.41237 | overlap 4457422 ATCAAAGAAGAGAAA TACAGCG AGG CGCTGGA TGTGGCGCGTCAGCA TERM 5947 4457434 - 4457422 - g 76 -9.1 -3.79177 | overlap 4457420 CAAAGAAGAGAAATA CAGCG AGG CGCTG GATGTGGCGCGTCAG TERM 5948 4458155 - 4458119 - g 70 -11 -2.75064 | gap 2, overlap 4458116 CTGCCTACCGAACTA CGCGACGCGGTGGAGGAT GTG ATCCTCAACCG--TCGCG ACGATGGCACCGAGC metH 4456283 - 4459966 + | homocysteine-N5-methyltetrahydrofolate transmethylase, B12-dependent TERM 5949 4459976 - 4459993 + F 91 -10.5 -4.82667 | opp_overlap 4459976 4459974 GAGTAAGTGATAACA CCGGGGT ATTT GCCCCGG TTTTTAATGTCATAA TERM 5950 4459993 - 4459976 - f 74 -9.8 -3.28814 | opp_overlap 4459976, overlap 4459974 GAGTAAGTGATAACA CCGGGG TATTTG CCCCGG TTTTTAATGTCATAA ECS88_4484 4460020 - 4460346 + | hypothetical protein ECS88_4485 4460389 - 4460838 + | hypothetical protein TERM 5951 4461167 - 4461140 - g 86 -4 -5.41143 | opp_overlap 4461164 GAGCGTCGAAAAAAA GCCGCTCGCC TTTTGCGC GGGGATCGGC GTTACCGCACTGGTG TERM 5952 4462377 - 4462389 + G 71 -3.3 -4.84311 | overlap 4462372 CTCAGTAATTTAAAA CTGGC AAT GTCGG TTTTCTTCTCTGGCG TERM 5953 4462557 - 4462574 + G 70 -4.1 -4.68384 | TTACTGGGAGATATG CAGCG TCTGAACT CGCTG TTTTGTTCGGTGGCT yjbB 4461009 - 4462640 + | putative transporter TERM 5954 4462723 - 4462703 - T 85 -11.2 -3.45742 | opp_overlap 4462702, overlap 4462701 GCACTATGAACAAGA TGCCGGAT CATGC ATCCGGCA ATTCACTTAAAAACG TERM 5955 4462761 - 4462737 - T 82 -7.2 -4.68424 | gap 2, opp_overlap 4462736 4462737 CAATTCACTTAAAAA CGGTGACCCGCT TCC AGCGG--CACCG CTTCTTCACCAGCCT pepE 4463419 - 4462730 - | (alpha)-aspartyl dipeptidase TERM 5956 4463668 - 4463689 + r 72 -5.8 -4.48967 | overlap 4463671 ACTTTGCCACCAATT TGAGCGCC CCTTAA GGCGCTGA TGTTTTTTTATCCTT ECS88_4488 4465042 - 4463801 - | L-sorbose 1-phosphate reductase TERM 5957 4464827 - 4464868 + g 95 -6 -5.4588 | overlap 4464831 ATCGCCGCAAAATTC GTGGCCGATGATGATGG-GA TTGG TCGCCA-CATCGTCGGGTAC TTTTTTATGGTTTTC ECS88_4489 4465936 - 4465082 - | sorbose permease IID component ECS88_4490 4466714 - 4465917 - | sorbose permease IIC component (PTS system) TERM 5958 4466111 - 4466092 - G 74 -2.8 -4.91852 | CCGAGGAAAAAGAAA GGCATCAA ATAT TTCACGCC CATCATGCGAAGCAC TERM 5959 4466280 - 4466264 - G 72 -10.1 -3.36273 | GTGCCGGAATAGCAA CGCGCAG TGC CTGCACG CCAAGCGCGGAGACA ECS88_4491 4467274 - 4466780 - | sorbose-specific phosphotransferase enzyme IIB component (PTS system) ECS88_4492 4467681 - 4467274 - | sorbose-specific phosphotransferase enzyme IIA component (PTS system) TERM 5960 4467680 - 4467669 - G 71 -2.2 -5.00616 | CGTGGGCGCAAAAAA TGGC ATTG ACCA TAAAGCCTCCTTAGC ECS88_4493 4468497 - 4467691 - | sorbitol-6-phosphate 2-dehydrogenase ECS88_4494 4469598 - 4468567 - | sorbitol/sorbose operon activator TERM 5961 4469307 - 4469329 + g 74 -6.2 -4.51174 | GGCCAAACTTTTGCT TCACTTGCTG CTC CAGCCAGAGA TTTTCGTTGTAGTCA TERM 5962 4470689 - 4470669 - g 72 -4.5 -4.61527 | overlap 4470671 AAAACGGCGGAAAAA GGCGGTCGC CCG GCGTCCAAC GGTAAGCGTTTTACC yjbC 4469862 - 4470734 + | 23S rRNA pseudouridine synthase yjbD 4471007 - 4470735 - | hypothetical protein TERM 5963 4471256 - 4471220 - R 100 -13.1 -5.24416 | opp_overlap 4471220 4471218 4471223 TAATGACAAGAAAAA CAATACGGCCCGAAATA ATG TCTTCCGGGCCATACTG TGTTTACTCAAACAA TERM 5964 4471291 - 4471279 - R 85 -7.7 -4.72863 | TCAAACAAATTAAAA TGCAG CTT CTGCA CTACCTGCTCGGCAT lysC 4472609 - 4471260 - | aspartokinase III TERM 5965 4472025 - 4472039 + g 70 -4.2 -4.68908 | overlap 4472017 4472026 GCCTCCACGGCCAAG CGTCGT TGT ACGACC TTTATTTTCGCTGCC TERM 5966 4473210 - 4473243 + G 100 -14.8 -4.93318 | gap 1, opp_overlap 4473206 4473203 AAATGAAAGACGTTA CGATCGCCGATCTTT TTGCT AAAGA-CGGCGATCG TTTTTCTAAGTTCTC pgi 4473134 - 4474783 + | glucosephosphate isomerase TERM 5967 4474858 - 4474810 - T 95 -13 -3.30243 | opp_overlap 4474810 4474811 4474842, overlap 4474811 4474837 ATGTAGGCCGGATAA GGCGTTCACGCCGCATCCGGCA ACCGA TGCCTGATGCGACGCGGTCGCG TCTTATCAGGCCTAC TERM 5968 4474810 - 4474858 + T 78 -10.8 -3.21924 | opp_overlap 4474810 4474811 4474837, overlap 4474811 4474842 ATGTAGGCCGGATAA GGCGTTCACGCCGCATCCGGCA ACCGA TGCCTGATGCGACGCGGTCGCG TCTTATCAGGCCTAC TERM 5969 4474857 - 4474811 - T 100 -16.5 -2.57931 | opp_overlap 4474810 4474811 4474842, overlap 4474810 4474837 TGTAGGCCGGATAAG GCGTTCACGCCGCATCCGGCA ACCGA TGCCTGATGCGACGCGGTCGC GTCTTATCAGGCCTA TERM 5970 4474811 - 4474857 + T 87 -14.3 -2.5294 | opp_overlap 4474811 4474810 4474837, overlap 4474810 4474842 TGTAGGCCGGATAAG GCGTTCACGCCGCATCCGGCA ACCGA TGCCTGATGCGACGCGGTCGC GTCTTATCAGGCCTA TERM 5971 4474842 - 4474860 + T 80 -11 -3.30124 | opp_overlap 4474811 4474810 4474837, overlap 4474811 4474810 CGGCAACCGATGCCT GATGCGAC GCG GTCGCGTC TTATCAGGCCTACAG TERM 5972 4474969 - 4474945 - T 100 -17.3 -4.62904 | opp_overlap 4474945 AAATAGCCTTAAAAA CAATGCCGACT ATA AGTCGGCATTG TTTTATCAGATAAAT TERM 5973 4474945 - 4474969 + T 100 -17.3 -4.40358 | opp_overlap 4474945 AAATAGCCTTAAAAA CAATGCCGACT ATA AGTCGGCATTG TTTTATCAGATAAAT ECS88_4499 4475510 - 4475262 - | hypothetical protein TERM 5974 4475614 - 4475593 - H 79 -11.7 -2.79023 | opp_overlap 4475593 4475596, overlap 4475596 GAAGGGGATTAACCA TAACCACAC TCCG GTGTGGTTA TTCTGCCCCTCTGGA TERM 5975 4475593 - 4475614 + H 85 -11.7 -3.32343 | opp_overlap 4475593 4475596, overlap 4475596 GAAGGGGATTAACCA TAACCACAC TCCG GTGTGGTTA TTCTGCCCCTCTGGA TERM 5976 4475596 - 4475611 + H 77 -9 -3.80174 | opp_overlap 4475593 4475596, overlap 4475593 GGGGATTAACCATAA CCACAC TCCG GTGTGG TTATTCTGCCCCTCT TERM 5977 4475611 - 4475596 - H 73 -9 -3.54029 | opp_overlap 4475596 4475593, overlap 4475593 GGGGATTAACCATAA CCACAC TCCG GTGTGG TTATTCTGCCCCTCT yjbF 4475638 - 4476276 + | putative lipoprotein yjbG 4476273 - 4477010 + | hypothetical protein TERM 5978 4477163 - 4477134 - g 72 -7.7 -4.00038 | gap 1, overlap 4477135 TAGGATTATTACAAA CGCCCACCGCGCGC ATG GCGCGGGAAGGG-G AGCTGAGCCTGAACT yjbH 4477010 - 4479106 + | putative porin TERM 5979 4479145 - 4479118 - T 72 -8.5 -3.6215 | opp_overlap 4479114 4479118 CTAAGTCATGGGAAA GGTGCCAGT TTTCGCACTC ACTGGCACC TTCATTCTTAATGGC TERM 5980 4479118 - 4479145 + T 71 -8.5 -3.56142 | opp_overlap 4479118, overlap 4479114 CTAAGTCATGGGAAA GGTGCCAGT TTTCGCACTC ACTGGCACC TTCATTCTTAATGGC ECS88_4503 4479431 - 4479153 - | conserved hypothetical protein; putative exported protein TERM 5981 4479433 - 4479447 + H 71 -8.6 -3.5616 | AGGTTACGTTTCATT TGTTCC AGA GGAACA TTGTCGATTTTTCGC TERM 5982 4479483 - 4479498 + H 87 -5.4 -5.45726 | GCTGGTGGCTGGGAA TCACCT GAAT GGGTGA TTTTTTTGGGCTGTG ECS88_4504 4479491 - 4479649 + | hypothetical protein yjbA 4479646 - 4480056 + | putative phosphate starvation inducible protein TERM 5983 4480079 - 4480062 - T 100 -12.7 -5.52384 | GCGGGAGTAAAAAAA GGCGCTC CGTG GAGCGCC GAATAACAGTCACAA malG 4481040 - 4480150 - | maltose transporter subunit ; membrane component of ABC superfamily malF 4482599 - 4481055 - | maltose transporter subunit ; membrane component of ABC superfamily TERM 5984 4482689 - 4482656 - R 70 -9.5 -2.88118 | opp_overlap 4482663 4482664 4482666 4482676, overlap 4482655 TTATCCGACAACAAC TGCCTGATGCGACGC TGAC GCGTCTTATCAGGCC TACATACGTTTCAAT TERM 5985 4482711 - 4482742 + r 77 -10 -3.55801 | opp_overlap 4482721, overlap 4482676 4482712 CGTTTCAATTTCGTA GGCCGGATAAGGCG TTTA CGCCGCATCCGGCA TTTCACAGCATTACT TERM 5986 4482712 - 4482741 + r 86 -13.5 -2.73159 | opp_overlap 4482721, overlap 4482676 4482711 GTTTCAATTTCGTAG GCCGGATAAGGCG TTTA CGCCGCATCCGGC ATTTCACAGCATTAC malE 4483943 - 4482753 - | maltose transporter subunit ; periplasmic-binding component of ABC superfamily TERM 5987 4484745 - 4484769 + G 75 -4.4 -4.7497 | gap 2, overlap 4484712 TGTGGCGATTGGCCG TACGCTGGTGGC CGA GCCA--AGCGTA TTTTTGCTCGATGAA TERM 5988 4484979 - 4485003 + G 72 -7.9 -3.97368 | gap 1 GGAGCTGTATCACTA TCCGGCAGAC CGTTTT GTC-GCCGGA TTTATCGGTTCGCCA malK 4484308 - 4485423 + | fused maltose transport subunit, ATP-binding component of ABC superfamily ; regulatory protein TERM 5989 4485997 - 4486021 + G 81 -9.9 -3.8613 | opp_overlap 4486000, overlap 4486000 AACTCTCTCTGGCAG CAACCCGCTCC TCT GAAGCGGGTGG TTCTTCCTCTTTCGC TERM 5990 4486018 - 4486000 - g 81 -12.4 -3.14132 | opp_overlap 4485997 4486000 TCTCTCTGGCAGCAA CCCGCTCC TCT GAAGCGGG TGGTTCTTCCTCTTT lamB 4485495 - 4486835 + | maltose outer membrane porin (maltoporin) TERM 5991 4486863 - 4486901 + F 78 -10.9 -3.21726 | opp_overlap 4486846 4486845 4486858 4486859 4486885 4486886, overlap 4486865 4486892 4486895 GGCCGGATAAGGTGC TTGCGCCGCATCCGGCA ACCAA TGCCTGATGCGACGCTG TTGCGTCTTATCAGG TERM 5992 4486865 - 4486899 + F 100 -15.7 -3.16961 | opp_overlap 4486846 4486845 4486858 4486859 4486885 4486886, overlap 4486863 4486892 4486895 CCGGATAAGGTGCTT GCGCCGCATCCGGCA ACCAA TGCCTGATGCGACGC TGTTGCGTCTTATCA TERM 5993 4486918 - 4486885 - f 74 -9.5 -3.34344 | opp_overlap 4486865 4486863 4486892 4486895 4486907, overlap 4486858 4486859 4486886 GCATCCGGCAACCAA TGCCTGATGCGACGC TGTT GCGTCTTATCAGGCC TACAACCGCTGCCGA TERM 5994 4486917 - 4486886 - f 84 -13 -2.60392 | opp_overlap 4486865 4486863 4486892 4486895 4486907, overlap 4486858 4486859 4486885 CATCCGGCAACCAAT GCCTGATGCGACGC TGTT GCGTCTTATCAGGC CTACAACCGCTGCCG TERM 5995 4486954 - 4486992 + F 78 -10.9 -3.21726 | opp_overlap 4486939 4486936 4486949 4486950 4486976 4486977, overlap 4486956 4486983 4486986 GGCCGGATAAGGTGC TTGCGCCGCATCCGGCA ACCAA TGCCTGATGCGACGCTG TTGCGTCTTATCAGG TERM 5996 4486956 - 4486990 + F 100 -15.7 -3.16961 | opp_overlap 4486939 4486936 4486949 4486950 4486976 4486977, overlap 4486954 4486983 4486986 CCGGATAAGGTGCTT GCGCCGCATCCGGCA ACCAA TGCCTGATGCGACGC TGTTGCGTCTTATCA TERM 5997 4487009 - 4486976 - f 74 -9.5 -3.34344 | opp_overlap 4486956 4486954 4486983 4486986 4486996, overlap 4486949 4486950 4486977 GCATCCGGCAACCAA TGCCTGATGCGACGC TGTT GCGTCTTATCAGGCC TACAACTGCTGCCGA TERM 5998 4487008 - 4486977 - f 84 -13 -2.60392 | opp_overlap 4486956 4486954 4486983 4486986 4486996, overlap 4486949 4486950 4486976 CATCCGGCAACCAAT GCCTGATGCGACGC TGTT GCGTCTTATCAGGC CTACAACTGCTGCCG TERM 5999 4486996 - 4487043 + F 75 -9.8 -3.53811 | opp_overlap 4486977 4486976 4487027 4487028 4487030 4487041, overlap 4486983 4486986 GATGCGACGCTGTTG CGTCTTATCAGGCCTACAACTG CTGC CGAAAGTAGGCCGGATAAGGCG TTTACGCCGCATCCG TERM 6000 4487064 - 4487027 - f 77 -10.5 -3.53761 | opp_overlap 4486996, overlap 4487028 4487030 4487041 CAACTGCTGCCGAAA GTAGGCCGGATAAGGCG TTTA CGCCGCATCCGGCATAA AAACAGCTTTAAGGG TERM 6001 4487063 - 4487028 - f 86 -14 -2.72043 | opp_overlap 4486996, overlap 4487027 4487030 4487041 AACTGCTGCCGAAAG TAGGCCGGATAAGGCG TTTA CGCCGCATCCGGCATA AAAACAGCTTTAAGG TERM 6002 4487061 - 4487030 - f 80 -12.2 -2.90496 | opp_overlap 4486996, overlap 4487028 4487027 4487041 CTGCTGCCGAAAGTA GGCCGGATAAGGCG TTTA CGCCGCATCCGGCA TAAAAACAGCTTTAA TERM 6003 4487077 - 4487090 + F 70 -9.5 -2.97017 | overlap 4487073 TAAAAACAGCTTTAA GGGGC GAAA GCCCC TCTGATTATCGGGTT malM 4487158 - 4488078 + | maltose regulon periplasmic protein TERM 6004 4488111 - 4488130 + F 100 -11.4 -5.67967 | opp_overlap 4488110 4488109 GATTTTGCAACAACT GGTGCGTC TCCT GGCGCACC TTTTTTTCTCCTCCT ubiC 4488257 - 4488754 + | chorismate pyruvate lyase ubiA 4488767 - 4489639 + | p-hydroxybenzoate octaprenyltransferase TERM 6005 4489652 - 4489669 + T 93 -11.3 -4.35604 | opp_overlap 4489652 TGATGATGTAAAAAA GCCGGAT GATC ATCCGGC TTTCTTCTGGGTTGC TERM 6006 4489669 - 4489652 - T 100 -11.3 -5.1101 | opp_overlap 4489652 TGATGATGTAAAAAA GCCGGAT GATC ATCCGGC TTTCTTCTGGGTTGC plsB 4492215 - 4489792 - | glycerol-3-phosphate O-acyltransferase TERM 6007 4489997 - 4490025 + g 72 -5.1 -4.58395 | ATACCGTGCAGCACG GAGAGACGTTGCG CGA CGGTGCGGCTCTC TTTTTCCAGCGTACC dgkA 4492386 - 4492754 + | diacylglycerol kinase lexA 4492864 - 4493472 + | DNA-binding transcriptional repressor of SOS regulon TERM 6008 4493486 - 4493509 + F 100 -16 -4.94262 | AACATATCTCTGAGA CCGCGATGCC GCCT GGCGTCGCGG TTTGTTTTTCATCTC dinF 4493491 - 4494870 + | DNA-damage-inducible SOS response protein TERM 6009 4494962 - 4494943 - f 73 -4.3 -4.77567 | opp_overlap 4494929 ACGTTCAGAAGAAAA GTGAACG TACTCT CATTCAC AACCTAACGATGAGG yjbJ 4494986 - 4495195 + | putative stress response protein zur 4495752 - 4495237 - | DNA-binding transcriptional repressor, Zn(II)-binding TERM 6010 4495634 - 4495622 - G 71 -9.1 -3.49858 | TCAAGCAGATCATAA GCGCT GAT AGCGC CATCCTGCAGACTCA TERM 6011 4495680 - 4495706 + g 77 -3 -5.03314 | gap 1, overlap 4495683 CGAGACGCTGTGGGG TCAGGCGCACA TTACGC TGTGCG-CAGA TTTTTTCAGCCTGCG yjbN 4495908 - 4496903 + | tRNA-dihydrouridine synthase A TERM 6012 4496941 - 4496957 + GT 100 -15.1 -4.43681 | opp_overlap 4496931 4496928 ATTCACCACGCCCTG CGCCCCG TCG CGGGGCG TTTTGCTGTTAAATC TERM 6013 4497244 - 4497232 - gT 70 -5.5 -4.3898 | opp_overlap 4497243, overlap 4497243 ATCAGGGCGATAAAA GCACC AAA AGTGC CGAAATATCAGCGTT yjbO 4496827 - 4497279 + | putative membrane protein of unknown function TERM 6014 4497411 - 4497441 + T 70 -5.6 -4.40358 | gap 2, opp_overlap 4497415, overlap 4497413 4497414 4497415 AGCCGAACTATAAAA GAAA--GGGCTTCC CAGGT GGAAGCCCAATTTC TTTTATGGAATCAAT TERM 6015 4497413 - 4497437 + T 76 -5.6 -4.77775 | opp_overlap 4497415, overlap 4497411 4497414 4497415 CCGAACTATAAAAGA AAGGGCTTCC CAGGT GGAAGCCCAA TTTCTTTTATGGAAT TERM 6016 4497414 - 4497436 + T 73 -9.1 -3.45581 | opp_overlap 4497415, overlap 4497413 4497411 4497415 CGAACTATAAAAGAA AGGGCTTCC CAGGT GGAAGCCCA ATTTCTTTTATGGAA TERM 6017 4497435 - 4497415 - T 100 -12.6 -4.82863 | opp_overlap 4497414 4497413 4497411 4497415 GAACTATAAAAGAAA GGGCTTCC CAGGT GGAAGCCC AATTTCTTTTATGGA TERM 6018 4497415 - 4497435 + T 81 -12.6 -2.66625 | opp_overlap 4497415, overlap 4497414 4497413 4497411 GAACTATAAAAGAAA GGGCTTCC CAGGT GGAAGCCC AATTTCTTTTATGGA qor 4498427 - 4497444 - | quinone oxidoreductase, NADPH-dependent TERM 6019 4497884 - 4497896 + g 91 -9.1 -4.59853 | overlap 4497891 ACGCGCCCGCTTTTA GCGCA CTC TGCGC TTTTTGCGCGGTTCC ECS88_4524 4500698 - 4498533 - | putative oxidoreductase TERM 6020 4499956 - 4499967 + gr 70 -4.4 -4.5442 | ATGGCGATCACCCCC TCGA CTCG TCGA TTTTCTCCTTCACCA TERM 6021 4500515 - 4500496 - GR 77 -11.4 -2.63631 | TTAAGGTCGATACTA CCGCTGAC TTGA GCCAGCGG TGCGTAATGGGGCAT ECS88_4525 4501971 - 4500571 - | putative transmembrane transport protein TERM 6022 4500903 - 4500893 - GR 75 -6.8 -4.42653 | AGTTCAGGCAGAAAA GCAC CTT GTGC ACCAAACATACCCCA TERM 6023 4501540 - 4501552 + gr 73 -10.5 -3.01712 | TTCGGTCATCAGTAC GGCGG CTC CCGCC TGTTCAGCCCCAGCA TERM 6024 4501853 - 4501842 - GR 74 -5.8 -4.47707 | GTGGACCAAAAATAA TGGC GGAT GCCA GGCTGTAAAGTGCGA ECS88_4526 4502841 - 4502062 - | putative Enoyl-CoA hydratase/carnithine racemase ECS88_4527 4504405 - 4502834 - | putative Acyl CoA:acetate/3-ketoacid CoA transferase, alpha and beta subunits TERM 6025 4503182 - 4503172 - G 75 -6.8 -4.38744 | AGCCAGAGAAAATAA TGCG CTT CGCA TGTGAGGTGATATCA TERM 6026 4503718 - 4503730 + g 70 -5.5 -4.41047 | GTTTCAGACTTCCGG CGGCA ACC TGTCG TTTTACTTGCGCAAT ECS88_4528 4504634 - 4505695 + | putative transcriptional regulator TERM 6027 4505699 - 4505727 + F 72 -9.7 -3.17325 | opp_overlap 4505698 4505697, overlap 4505698 4505695 4505702 4505704 CGGGGGCGTTAAATG CTGTAGCGAGAAA CTG TTTCTCGCTATAC TCTCTTGTCCCCCAT TERM 6028 4505702 - 4505724 + F 86 -13.6 -2.78526 | opp_overlap 4505698 4505697, overlap 4505699 4505698 4505695 4505704 GGGCGTTAAATGCTG TAGCGAGAAA CTG TTTCTCGCTA TACTCTCTTGTCCCC TERM 6029 4505704 - 4505722 + F 80 -11.8 -2.93633 | opp_overlap 4505698 4505697, overlap 4505702 4505699 4505698 4505695 GCGTTAAATGCTGTA GCGAGAAA CTG TTTCTCGC TATACTCTCTTGTCC TERM 6030 4506120 - 4506103 - g 77 -3.3 -5.02476 | overlap 4506105 AGAGCTGTCAAAAAA TACGCCA AGTG CGGCGAA CATCAGTGCATATGC TERM 6031 4506440 - 4506420 - g 100 -6.7 -5.80364 | opp_overlap 4506420 4506419 ATCTCAACAAAAAAA CCGCTGGCT TGC AGCCGTCGG ATTTGATCATCGTTG TERM 6032 4507116 - 4507091 - g 74 -8.9 -3.9281 | ATTATCGGTAAACAA CGTAACGGCCC AATC GGGACGGTACG CCTGACCTTTAACGG dnaB 4505768 - 4507183 + | replicative DNA helicase TERM 6033 4507808 - 4507824 + G 72 -5.8 -4.34402 | TGGTCAACGTTCCAT TGCCGC GTCGG GTGGCA TTTTACTCTGGCCAC alr 4507236 - 4508315 + | alanine racemase 1, PLP-binding, biosynthetic TERM 6034 4508357 - 4508377 + GF 77 -9 -3.71873 | CTTATTCAGAAATCG CCGCGTGT CTGGC ATACGCGG TTTCCGTCTGGCTGG ECS88_4531 4508338 - 4508895 + | putative transporter ECS88_4532 4508868 - 4509890 + | putative transcriptional regulator tyrB 4509972 - 4511165 + | tyrosine aminotransferase, tyrosine-repressible, PLP-dependent TERM 6035 4511176 - 4511195 + F 93 -13.6 -3.18264 | opp_overlap 4511176 TGTGATTTTAATCAA CAGGCGGA TCTC TCCGCCTG TTCCTGACTCCAGCC TERM 6036 4511195 - 4511176 - f 100 -13.6 -3.35813 | opp_overlap 4511176 TGTGATTTTAATCAA CAGGCGGA TCTC TCCGCCTG TTCCTGACTCCAGCC TERM 6037 4511358 - 4511346 - g 74 -3.4 -4.93296 | CCATCAGGAGAAAAA CATG GAGAA CATG ACCTCGCCCGGCACG sucA 4511272 - 4514091 + | 2-oxoglutarate dehydrogenase E1 component sucB 4514124 - 4515278 + | dihydrolipoamide succinyltransferase (E2 component) ECS88_4536 4515290 - 4516708 + | putative dihydrolipoyl dehydrogenase, E3 component (lpd-like) TERM 6038 4517814 - 4517797 - g 88 -12.7 -3.61398 | opp_overlap 4517796 TCTCTCCGGTAATAA CGCTGCC GAAG GGCAGCG GTTACTGGCAGAAAG sucC 4516730 - 4517899 + | Succinyl-CoA synthetase beta chain (SCS-beta) TERM 6039 4518056 - 4518068 + G 71 -2.6 -4.88407 | GGCGGGCAACGGCAT CTGG ATCGC CCGG TTTTTGATTCAATGA sucD 4517912 - 4518784 + | Succinyl-CoA synthetase alpha chain (SCS-alpha) TERM 6040 4518803 - 4518819 + F 100 -9.4 -5.77988 | opp_overlap 4518797 4518803 ATAAATGAATATCAA GGGAGC ATATC GCTCCC TTTTTTTATCTGTGT TERM 6041 4518819 - 4518803 - f 77 -10.1 -3.44936 | opp_overlap 4518803, overlap 4518797 ATAAATGAATATCAA GGGAGCA TAT CGCTCCC TTTTTTTATCTGTGT TERM 6042 4518950 - 4518968 + F 100 -3.1 -5.93252 | opp_overlap 4518940 AAAGATGGCATAGCT CCTGC AATAGCCAG GCAGG TTTTTTATTTTTCAC TERM 6043 4520075 - 4520095 + GF 70 -9 -3.18264 | overlap 4520062 4520059 CAGCCTGGGGTCCAC GCTGCTTG ATACG CAGGCAGC TTCATGGATGGCGAA ECS88_4539 4518990 - 4520495 + | putative membrane protein; putative transporter ECS88_4540 4520369 - 4521580 + | Putative malate/L-lactate dehydrogenases ECS88_4543 4524740 - 4522920 - | putative C4-dicarboxylate transport sensor protein (dctB-like) TERM 6044 4524093 - 4524104 + g 70 -5.8 -4.19238 | TTGCAGTGTTCGCAT TCGC CATG GCGA TTTTGAACTTAAAAA TERM 6045 4524482 - 4524517 + g 71 -10.6 -2.92175 | gap 1, opp_overlap 4524503, overlap 4524473 TGAGTTCGCTGGACG TCATATCGTCAGGCG TAATTAC CGCCTGACGG-ATGA TATGGTCTGTTGAGA TERM 6046 4524659 - 4524646 - G 81 -4.5 -5.09426 | CGCAAGTGCAAAAAA GCGAT TGAA ACCGC GAGCATGATAAGAAA TERM 6047 4525291 - 4525276 - g 86 -4 -5.40072 | GGCGCGGCAAAAAAA CCTTCT CGCC AGAAAG CGAAGATTATCTGAA aphA 4525017 - 4525730 + | acid phosphatase/phosphotransferase, class B, non-specific yjbQ 4525841 - 4526257 + | hypothetical protein TERM 6048 4526429 - 4526415 - g 74 -7.8 -4.07568 | overlap 4526418 CTGTTTCGCTGAAAA CCAGCC CGG AGCTGG CGGAGCTGCTACGTC yjbR 4526261 - 4526617 + | hypothetical protein TERM 6049 4526644 - 4526626 - T 100 -12.4 -4.08958 | ACTCTGAAAGAAGAA GGCCGCTC TGA AAGCGGCC TTAACGATTACAGCA uvrA 4529474 - 4526652 - | ATPase and DNA damage recognition protein of nucleotide excision repair excinuclease UvrABC ssb 4529728 - 4530264 + | Single-stranded DNA-binding protein TERM 6050 4530356 - 4530334 - T 100 -13.5 -5.28176 | opp_overlap 4530337 GCCAGCCATAAAAAA GAAGCCTCC GTTAT GGAGGCTTC TACATATCAAGTCAA TERM 6051 4530337 - 4530353 + T 76 -10.1 -3.39505 | opp_overlap 4530334 AGCCATAAAAAAGAA GCCTCCG TTA TGGAGGC TTCTACATATCAAGT yjcB 4530644 - 4530363 - | conserved hypothetical protein; putative inner membrane protein TERM 6052 4530767 - 4530747 - H 76 -4.1 -5.1523 | opp_overlap 4530747 TGCAGAACACAAAAA TGAAACA CTCTGTT TGTTTCA TGAATTTTGTGAACT TERM 6053 4532656 - 4532627 - g 85 -12.9 -3.19389 | CAATGGATGGAGCAA TTACCCGCGCG GGAGTTAA CGCGCGGGCAA TAAAACTACAGGCGG yjcC 4531073 - 4532659 + | putative signal transduction protein (EAL domain containing protein) soxS 4532985 - 4532662 - | DNA-binding transcriptional dual regulator soxR 4533071 - 4533535 + | DNA-binding transcriptional dual regulator, Fe-S center for redox-sensing TERM 6054 4533532 - 4533556 + F 100 -14.4 -4.67651 | opp_overlap 4533532 GGAAGATGAACAAAA CTAAAGCGCC ACAAG GGCGCTTTAG TTTGTTTTCCGGTCT TERM 6055 4533556 - 4533532 - f 100 -14.4 -4.78753 | opp_overlap 4533532 GGAAGATGAACAAAA CTAAAGCGCC ACAAG GGCGCTTTAG TTTGTTTTCCGGTCT TERM 6056 4533703 - 4533716 + F 71 -5.3 -4.57073 | GGCGTTTCTTCGCCA GTGTA AAAG TACAC TTTTTAGCCGCAATA TERM 6057 4534250 - 4534238 - g 78 -10.5 -3.53811 | opp_overlap 4534247 GGCATGCTGGGTAAA GCGGG CTT CCCGC CTGCGGCAGTTTTCG yjcD 4534082 - 4535431 + | putative permease TERM 6058 4535447 - 4535478 + F 100 -12.4 -4.37658 | opp_overlap 4535453, overlap 4535453 TCTTACATAGGATTC TGAAAACGGGTGGC AATG GCTGCCCGTTTTTA TTTTCTCCGCACATT TERM 6059 4535453 - 4535472 + F 100 -9.2 -5.54907 | opp_overlap 4535453, overlap 4535447 ATAGGATTCTGAAAA CGGGTGGC AATG GCTGCCCG TTTTTATTTTCTCCG TERM 6060 4535732 - 4535749 + G 74 -2.7 -4.94672 | TTTGGTTTGCATGTG GAGTTTG ATCC TGAACTC TTTTTAGTCTTGTTT TERM 6061 4536107 - 4536133 + G 72 -7.4 -3.87815 | gap 1 ATGGGGACAATGATC TTC-ACCGTCG GCGGTG CGACGGTCGAA TTTATGAAAGTGGCA yjcE 4535582 - 4537231 + | putative cation/proton antiporter TERM 6062 4537235 - 4537266 + T 76 -10 -3.27994 | opp_overlap 4537232 GAAAATCAGTAATCT GCATGGTTGGCGGG CGAG CCCGCCAACCCGAC TTACTCTGGCGTTAA ECS88_4557 4538151 - 4537267 - | putative transcriptional regulator (LysR family) TERM 6063 4537832 - 4537821 - G 77 -7.2 -4.57341 | AACGCTGGCGAAAAA GGCC AATC GGCC CGGCCATCAACATCC ECS88_4558 4538255 - 4538665 + | hypothetical protein ECS88_4559 4538658 - 4539347 + | hypothetical protein TERM 6064 4539376 - 4539353 - T 100 -13.2 -4.1552 | GATGTTCTGAAGAAA TTCCCCGATC AAGC GACCGGGGAA GGGGAGAGATTAATG actP 4541035 - 4539386 - | acetate transporter TERM 6065 4541000 - 4541028 + g 72 -6 -4.33105 | gap 1 GTTAGCTGCGAAAGG GAG-TGTGGCGGC AAGC GCCGTCAGAACTC TTTTCATGATGCTTG yjcH 4541346 - 4541032 - | conserved hypothetical protein; putative inner membrane protein involved in acetate transport TERM 6066 4541268 - 4541283 + g 75 -5.4 -4.62783 | overlap 4541269 TAATCGACAGGATGG TGGCAA ACCG TTGCCG TTTTTCGACTAACTC TERM 6067 4541470 - 4541438 - R 87 -14.1 -2.52464 | overlap 4541448 4541449 CCCTTGCCGAATGTA GGCCGGATAAGGCGT TAT ACGCCGCATCCGGCA ATCAATGCCTGATGC TERM 6068 4541460 - 4541448 - R 71 -9.1 -3.30243 | overlap 4541438 4541449 ATGTAGGCCGGATAA GGCGT TAT ACGCC GCATCCGGCAATCAA TERM 6069 4541509 - 4541476 - R 74 -9.5 -3.34344 | opp_overlap 4541481, overlap 4541449 4541477 GCATCCGGCAATCAA TGCCTGATGCGACGC TGTC GCGTCTTATCAGGCC TACAGCCGTTGCCGA TERM 6070 4541508 - 4541477 - R 84 -13 -2.60392 | opp_overlap 4541481, overlap 4541449 4541476 CATCCGGCAATCAAT GCCTGATGCGACGC TGTC GCGTCTTATCAGGC CTACAGCCGTTGCCG TERM 6071 4541481 - 4541499 + r 80 -11 -3.30124 | opp_overlap 4541449 4541477 4541476 CGGCAATCAATGCCT GATGCGAC GCT GTCGCGTC TTATCAGGCCTACAG TERM 6072 4541561 - 4541530 - R 79 -12.2 -2.52464 | opp_overlap 4541541, overlap 4541540 4541541 CCGTTGCCGAATGTA GGCCGGATAAGGCG TTCA CGCCGCATCCGGCA ACCAGCGCCTGATGC acs 4543596 - 4541638 - | acetyl-CoA synthetase TERM 6073 4542957 - 4542994 + g 81 -4.7 -5.06414 | CCACCACATGCTCTA CGCTGGTGACGTTCGGG TTTT TCAGCGCGTCATCAACG TTTTTCTTCAGCGGA TERM 6074 4543314 - 4543330 + g 77 -6.5 -4.64676 | opp_overlap 4543314, overlap 4543315 CGCCTTCCCAGATGA TGGCGGT ACG ATCGCCG TTTTCTTGCAGATGG TERM 6075 4543970 - 4543950 - H 100 -9.7 -5.51353 | overlap 4543951 GAAAAACAATAAAAA CCGCCATTG CAA CAATGGCGC AATTCGGATGAAGCC TERM 6076 4543969 - 4543951 - H 100 -13.2 -3.87151 | overlap 4543950 AAAAACAATAAAAAC CGCCATTG CAA CAATGGCG CAATTCGGATGAAGC TERM 6077 4544600 - 4544582 - g 72 -8 -3.8709 | opp_overlap 4544596 AAACCTTTCGAGAAA GCCGGACG TTT CGACCAGC AATCGATGGTTTGCG nrfA 4543988 - 4545424 + | nitrite reductase, formate-dependent, cytochrome nrfB 4545469 - 4546035 + | nitrite reductase, formate-dependent, penta-heme cytochrome c TERM 6078 4546135 - 4546184 + G 75 -11.5 -2.93703 | gap 1, overlap 4546137 TGAATATCAATGGTG TGCGTTACGGCATGGTGCATGACG AGT CGTTATGCATCG-GCTGTACCGCC TGTATGGATGCTTGT nrfC 4546032 - 4546703 + | formate-dependent nitrite reductase, 4Fe4S subunit nrfD 4546700 - 4547656 + | formate-dependent nitrite reductase, membrane subunit TERM 6079 4549177 - 4549165 - g 76 -10.5 -3.34344 | opp_overlap 4549165 GCATTGGTGAATTAA CGCCG GAG CGGCG TTTTTACGAAGCACG TERM 6080 4549165 - 4549177 + G 95 -10.5 -4.56597 | opp_overlap 4549165 GCATTGGTGAATTAA CGCCG GAG CGGCG TTTTTACGAAGCACG nrfE 4547736 - 4549394 + | heme lyase (NrfEFG) for insertion of heme into c552, subunit NrfE nrfF 4549387 - 4549770 + | heme lyase (NrfEFG) for insertion of heme into c552, subunit NrfF nrfG 4549767 - 4550363 + | heme lyase (NrfEFG) for insertion of heme into c552, subunit NrfG TERM 6081 4551829 - 4551845 + G 70 -6.5 -4.17958 | overlap 4551840 GCAGCGTAGGGATCC CGCTGGA AGG TCTGGCG TTTATTGCCGGTGTT gltP 4550706 - 4552019 + | glutamate/aspartate:proton symporter TERM 6082 4552054 - 4552025 - T 83 -12.1 -3.21695 | opp_overlap 4552027, overlap 4552027 GGATCAGTAATTGAA GATTGCCGGGGGG ATAT CCACCCGGCAATG TGTGGATGCCTGACT TERM 6083 4552027 - 4552052 + T 89 -14.7 -2.91912 | opp_overlap 4552025 4552027 ATCAGTAATTGAAGA TTGCCGGGGGG ATAT CCACCCGGCAA TGTGTGGATGCCTGA TERM 6084 4552052 - 4552027 - T 95 -14.7 -3.16944 | opp_overlap 4552027, overlap 4552025 ATCAGTAATTGAAGA TTGCCGGGGGG ATAT CCACCCGGCAA TGTGTGGATGCCTGA TERM 6085 4552120 - 4552151 + T 75 -8.6 -3.73775 | opp_overlap 4552112 4552113 CGGATAAGGCGTTTA CGCCGCATCCGACA TCAA TGCCTGATGCGACG TTTGCTGCGCCTACC yjcO 4552856 - 4552167 - | hypothetical protein ECS88_4572 4553671 - 4552967 - | putative ABC transporter ATP-binding protein (yddO) TERM 6086 4553608 - 4553622 + g 70 -5.6 -4.36914 | overlap 4553610 TAACCGAAAAACTGG CGGCAG AAA CTGCGG TTTTCTCAGCAAAAG ECS88_4573 4554554 - 4553658 - | putative dipeptide/oligopeptide/nickel transport system, ATPase component TERM 6087 4554158 - 4554176 + gr 70 -4.4 -4.46493 | overlap 4554149 GTTGATGGAGCGTAA GCGCCTCT TCC AGTTGCGC TTTTACTGTCTTTAC ECS88_4574 4555320 - 4554487 - | putative dipeptide/nickel transporter, Inner membrane permease subunit (yddQ) ECS88_4575 4556462 - 4555320 - | putative dipeptide/nickel transporter, Inner membrane permease subunit precursor (yddR) TERM 6088 4556425 - 4556392 - G 100 -13.9 -3.96531 | gap 1, opp_overlap 4556410, overlap 4556393 4556395 4556414 CCATACAGTGATAAA TCAGCGGCTGGCCTGC AAT ACAGGCCAGCC-CTGG TACCGCGCCCGGTAA TERM 6089 4556424 - 4556393 - G 100 -17.4 -2.97436 | gap 1, opp_overlap 4556410, overlap 4556392 4556395 4556414 CATACAGTGATAAAT CAGCGGCTGGCCTGC AAT ACAGGCCAGCC-CTG GTACCGCGCCCGGTA TERM 6090 4556422 - 4556395 - G 87 -14.2 -3.03459 | gap 1, opp_overlap 4556410, overlap 4556393 4556392 4556414 TACAGTGATAAATCA GCGGCTGGCCTGC AAT ACAGGCCAGCC-C TGGTACCGCGCCCGG TERM 6091 4556451 - 4556414 - G 100 -19.9 -3.06696 | opp_overlap 4556410, overlap 4556395 4556393 4556392 CTGGCCTGCAATACA GGCCAGCCCTGGTACCG CGCC CGGTAACAGGGCTGGAC GCGAGTTGCATACAG ECS88_4576 4558037 - 4556469 - | putative ABC-type dipeptide transport system, periplasmic component TERM 6092 4556584 - 4556600 + g 76 -9.5 -3.84389 | overlap 4556587 ATAAAGACATACGGG GAACTAC GTT GTAGTTC TTGTTGCATTTTCTT TERM 6093 4556651 - 4556665 + g 75 -5.6 -4.70117 | TGCTATCAGGTTCAG CGATGG CCG CCAGCG TTTCTTTGTTCAGTT TERM 6094 4557312 - 4557330 + g 71 -3 -4.77036 | overlap 4557313 GATCAGCAGGCGACG CGTTGCCG GAT CGGGAACA TTTTTGATGATGACG TERM 6095 4558357 - 4558332 - R 100 -11.3 -5.64274 | gap 1, opp_overlap 4558332 GTATGTATAAAAAAA TCCGGAAACAGA GAG TC-GTTTCCGGA TTGATACAAAGGCGT TERM 6096 4558332 - 4558357 + r 81 -11.3 -3.14211 | gap 1, opp_overlap 4558332 GTATGTATAAAAAAA TCCGGAAACAGA GAG TC-GTTTCCGGA TTGATACAAAGGCGT fdhF 4560559 - 4558412 - | formate dehydrogenase-H, selenopolypeptide subunit TERM 6097 4558470 - 4558522 + g 76 -7.9 -4.19177 | gap 4, opp_overlap 4558468 TACTCGTCAATCACG TACTGC-TCG-GCG-G-CGCGCTGATC GGC GATCGGCTCGACGCGCACGGCGCAGTA TTTGTATTCCGGCGT TERM 6098 4558698 - 4558731 + g 74 -8.3 -3.91897 | gap 1 ACCAATGCCTCATCT TCAATACC-CAGACGT TTG GCGTCTTCGGTATTGA TTTGTGCGTAGCCAG TERM 6099 4559245 - 4559256 + g 75 -7.2 -4.30576 | GTAAAATGACATCCG CCGC CGAC GCGG TTTTGGTCATAAAGA TERM 6100 4559730 - 4559751 + g 79 -12.3 -3.06815 | opp_overlap 4559728 GCCGCCTGACGAATC TCACTGGCG CTGA CGCCGGTGA TATCTTCAACCGACT TERM 6101 4559811 - 4559846 + g 95 -9.9 -4.69053 | gap 1 TACTCTTCAAAGCCT TCTGTACGG-GAAGCG ACGAA CGCTTTGTCGTACAGA TTTTCTTCAATAATG TERM 6102 4559882 - 4559900 + g 72 -4.4 -4.66609 | opp_overlap 4559882 4559884, overlap 4559884 GCCCATCGCATTCAA CAGCGCGA TGT TCGAGCCG TTTTTCAATGCAATG TERM 6103 4560750 - 4560725 - R 100 -14.1 -4.10552 | opp_overlap 4560723 4560722 CGTGACGAAACGAAA TACCGCGTGAC AGCC ATCACGCGGTA GACATTTTATTTTTT yjcP 4562223 - 4560757 - | outer membrane factor of efflux pump TERM 6104 4561242 - 4561225 - G 70 -4.1 -4.70659 | overlap 4561226 4561240 GTCCAGACCGAAAAA CGCTTTG ATAT CAAAGCT CGGGTAGAACAGCGC TERM 6105 4562069 - 4562094 + g 72 -6.9 -4.21141 | gap 1 TGCGGCCAGCCGGAG CTGGCAAGATGA ATA TCATCG-GCCAG TTTGATTTGTTCCGG yjcQ 4564271 - 4562220 - | multidrug efflux system component TERM 6106 4564023 - 4563999 - G 71 -2.7 -4.8048 | overlap 4564001 4564002 TTTGTAGATCAAAAA CAGGCTGCCGA TCT CCAGCACCGTG GCAACCACAAACAAG yjcR 4565302 - 4564271 - | membrane fusion protein of efflux pump TERM 6107 4564813 - 4564827 + g 85 -11.4 -3.62597 | TAAGGTCCGCTTCTG CCGCAC GCT GTGCGG TTCTTGCACGGTCAA TERM 6108 4564905 - 4564927 + g 73 -4 -4.85599 | overlap 4564873 CGTAACGTATCGCTG GCTTGTTTCG CGG CGGCACGGGC TTTTTCTACCGTGGC ECS88_4582 4565644 - 4565321 - | conserved hypothetical protein; putative membrane protein; putative Formate dehydrogenase H TERM 6109 4565796 - 4565766 - R 72 -7.6 -4.06502 | gap 1, opp_overlap 4565756, overlap 4565762 4565767 TATTTTTAAAGCAAA TGCTTT-GGGGGC TTCAGC GCCCCCAAAAGCG AGTGACATTAATTTG TERM 6110 4565795 - 4565767 - R 76 -11.1 -3.03419 | gap 1, opp_overlap 4565756, overlap 4565762 4565766 ATTTTTAAAGCAAAT GCTTT-GGGGGC TTCAGC GCCCCCAAAAGC GAGTGACATTAATTT yjcS 4567789 - 4565804 - | putative alkyl sulfatase TERM 6111 4568020 - 4568058 + r 71 -8 -3.78953 | overlap 4568021 TATATATTGTACCTG TCGTTGGCACAGCGGGAC ATT GCGCTACTGTGCCAACGC TTTACTCATGGGACT TERM 6112 4568021 - 4568057 + r 78 -11.5 -2.87051 | overlap 4568020 ATATATTGTACCTGT CGTTGGCACAGCGGGAC ATT GCGCTACTGTGCCAACG CTTTACTCATGGGAC alsK 4568993 - 4568064 - | D-allose kinase TERM 6113 4568733 - 4568713 - G 74 -7.5 -4.11404 | overlap 4568714 GCGAGATCATATAAA TCTGCCGCT GTT AACGGCAGG TTAGGCGTAGAAATA TERM 6114 4568732 - 4568714 - G 72 -11 -3.0636 | overlap 4568713 CGAGATCATATAAAT CTGCCGCT GTT AACGGCAG GTTAGGCGTAGAAAT TERM 6115 4568963 - 4568937 - G 77 -7.3 -4.52589 | opp_overlap 4568922 TGTCCGCAGACAAAA GCGGATATGCG TTGCC CCCATATCCAC GCCCGCTACGACGTT alsE 4569672 - 4568977 - | allulose-6-phosphate 3-epimerase TERM 6116 4570569 - 4570552 - R 87 -7.7 -4.89009 | ACAGCGAACCAAAAA TGGCGAC GATG ATCGCCA GGATAAAAAAGGTGC alsA 4572174 - 4570642 - | fused D-allose transporter subunits of ABC superfamily: ATP-binding components TERM 6117 4571135 - 4571122 - G 75 -5.2 -4.58685 | opp_overlap 4571122 4571133 AAAGTTGGGGAAAAA GCCG TTATCC CGGC GGCTTTCAGTGATGT TERM 6118 4571144 - 4571160 + g 71 -2.2 -5.0133 | overlap 4571135 4571133 TCCCGGCGGCTTTCA GTGATG TAAGC CATCCC TTTTTTCACGGCATC alsB 4573236 - 4572301 - | D-allose transporter subunit ; periplasmic-binding component of ABC superfamily TERM 6119 4573068 - 4573082 + g 86 -7.1 -4.92777 | opp_overlap 4573064 4573068 AGGCAAAAATATCAA CGCTG ACGCC CAGCG TTTTTGCTTCATCTT TERM 6120 4573257 - 4573294 + r 93 -12.1 -3.90744 | opp_overlap 4573268, overlap 4573263 TGTTCTCACGGTAAG GGGAGAGGTAACTCCGC GATG GCGGAATTACCTTTTTC TTATTTCAGCGCGCC TERM 6121 4573263 - 4573288 + r 100 -11.9 -5.38549 | opp_overlap 4573268, overlap 4573257 CACGGTAAGGGGAGA GGTAACTCCGC GATG GCGGAATTACC TTTTTCTTATTTCAG rpiR 4574185 - 4573295 - | DNA-binding transcriptional repressor TERM 6122 4573721 - 4573700 - G 75 -5.2 -4.62471 | gap 1, overlap 4573701 4573702 GCCAATGCGCAAAAA CTTGTGCTG TACAT CAGCAC-AG ATAGCATTTGATCCT rpiB 4574544 - 4574993 + | ribose 5-phosphate isomerase B/allose 6-phosphate isomerase yjdP 4575062 - 4575391 + | hypothetical protein phnP 4576177 - 4575419 - | carbon-phosphorus lyase complex accessory protein phnO 4576613 - 4576179 - | putative acyltransferase with acyl-CoA N-acyltransferase domain phnN 4577157 - 4576600 - | ribose 1,5-bisphosphokinase phnM 4578293 - 4577157 - | carbon-phosphorus lyase complex subunit phnL 4578970 - 4578290 - | carbon-phosphorus lyase complex subunit TERM 6123 4578409 - 4578419 + g 72 -4.6 -4.62069 | GGATCAGTTCCACTA CGGC GGC GCTG TTTTTAGCGTCCAGC TERM 6124 4579011 - 4579057 + r 93 -12.4 -3.53811 | opp_overlap 4579054, overlap 4579001 4579041 GATGCGACGCTGATG CGTCTTATCCGACCTACGGG GAGCGCA TTTGTAGGCCGGATAAGGCG TTTACGCCGCATCCG phnK 4579839 - 4579081 - | carbon-phosphorus lyase complex subunit phnJ 4580681 - 4579836 - | carbon-phosphorus lyase complex subunit phnI 4581738 - 4580674 - | carbon-phosphorus lyase complex subunit phnH 4582322 - 4581738 - | carbon-phosphorus lyase complex subunit TERM 6125 4581936 - 4581898 - G 79 -12.5 -3.01712 | gap 2 CGTTCTTCGGCAATA CCTGCGCCGGTGAGGCGCA ACA TACGCC-CACCG-CTCAGG CTGGTGACCTGTAAA phnG 4582771 - 4582319 - | carbon-phosphorus lyase complex subunit phnF 4583497 - 4582772 - | putative DNA-binding transcriptional regulator of phosphonate uptake and biodegradation TERM 6126 4583013 - 4582992 - G 70 -5.1 -4.36914 | gap 1 TGCTCGCGCAGAAAA TCGTGCAGCG AAC CGCTGT-CGA AACGTTGCAGCGTCG phnE 4584360 - 4583518 - | phosphonates transport system, permease protein phnD 4585419 - 4584403 - | phosphonate/organophosphate ester transporter subunit ; periplasmic binding component of ABC superfamily TERM 6127 4584777 - 4584791 + g 76 -7.8 -4.21936 | overlap 4584778 TCAGTTCTTTGAGCT TCTCCG GCG CGGAGG TTTTCAGCTTGTCGA phnC 4586232 - 4585444 - | phosphonate/organophosphate ester transporter subunit ; ATP-binding component of ABC superfamily TERM 6128 4585822 - 4585842 + g 74 -8.9 -3.96327 | CATGCCAACGCGGGT CAGCGCCTG TAA CGCGCGCTG TTTCTGCTCGCGGGT TERM 6129 4585906 - 4585885 - G 72 -10.1 -3.29263 | opp_overlap 4585877, overlap 4585874 ACAGGTTCGCCAGAA TGGCGTGCT GCCG AGCGCGCCA ATCAGCACGTTCTCC phnB 4586808 - 4586365 - | hypothetical protein TERM 6130 4586906 - 4586874 - R 95 -14.2 -3.15708 | opp_overlap 4586886, overlap 4586883 4586885 4586886 ACAGATGAGAGGGAA GCCTGATAAGACGC GGTCA GCGTCGCATCAGGC AGTCGCCACCGTTGC ECS88_4609 4587450 - 4586968 - | putative alkylphosphonate uptake protein in phosphonate metabolism TERM 6131 4587358 - 4587346 - G 95 -9.1 -5.08011 | AAAAGCGCCAAAAAA CGGCA GAT TGCCG AAAAAGGCCGCAATT TERM 6132 4588229 - 4588243 + G 71 -2.1 -4.96646 | TCGAAAAATATTATC TGGGT GCTCA ACCTA TTTTTCATTGTCTGA TERM 6133 4588469 - 4588457 - g 77 -3.4 -5.03314 | CGCATCTGCAAAAAA TGCT TAACC AGCA GCTGGCACGCGCCTC yjdA 4587706 - 4589934 + | conserved hypothetical protein; putative nucleoside triphosphate hydrolase domain yjcZ 4589931 - 4590809 + | hypothetical protein proP 4591073 - 4592575 + | proline/glycine betaine transporter TERM 6134 4592727 - 4592746 + T 73 -5 -4.65722 | gap 1, overlap 4592730 TAACTACCGTGTTCA GCGTGCTGG TGG TCAGCA-GC TTTCTTTATATCTGG basS 4593843 - 4592752 - | sensory histidine kinase in two-component regulatory system with BasR TERM 6135 4593427 - 4593454 + g 74 -9.8 -3.53012 | CCTTTCGTTATCCAG CGTGCTGGTCAG GCGA CTGACCAGATCG TTTAACGCCGAAACC basR 4594521 - 4593853 - | DNA-binding response regulator in two-component regulatory system with BasS eptA 4596161 - 4594518 - | putative metal dependent hydrolase TERM 6136 4596242 - 4596209 - R 89 -9.7 -4.54727 | opp_overlap 4596213, overlap 4596213 GCTCGCAAAGCAAAA TTAAGCCAACCTTAA GTTC TTAAGGTTGGCTTTT ATGTTTGCTTGATTA TERM 6137 4596213 - 4596238 + r 100 -14.9 -4.84539 | opp_overlap 4596209 4596213 GCAAAGCAAAATTAA GCCAACCTTAA GTTC TTAAGGTTGGC TTTTATGTTTGCTTG TERM 6138 4596238 - 4596213 - R 100 -14.9 -3.78998 | opp_overlap 4596213, overlap 4596209 GCAAAGCAAAATTAA GCCAACCTTAA GTTC TTAAGGTTGGC TTTTATGTTTGCTTG adiC 4597602 - 4596265 - | arginine/agmatine antiporter TERM 6139 4597568 - 4597536 - G 80 -12 -3.33162 | overlap 4597539 CACCTGACCCCATAA TATTCCCCGACACC ATCAG GGTGACGGGGATTA AGCCCACTTTGTGAG TERM 6140 4597565 - 4597539 - G 84 -13.7 -2.53822 | overlap 4597536 CTGACCCCATAATAT TCCCCGACACC ATCAG GGTGACGGGGA TTAAGCCCACTTTGT adiY 4598500 - 4597739 - | DNA-binding transcriptional activator TERM 6141 4597830 - 4597820 - G 75 -5.4 -4.69487 | opp_overlap 4597820 4597818 AAAGACAGAAATAAA GTAC GAC GTAC TGTTGTAGCCGCAGG TERM 6142 4598718 - 4598700 - R 100 -8.8 -5.85178 | overlap 4598701 AACAGGCAAAAAAAA GCGCGG GGTGGGA CCGCGC AAAAAGCATGACATT TERM 6143 4598719 - 4598701 - R 70 -6.6 -4.08666 | overlap 4598700 ACAGGCAAAAAAAAG CGCGGGGT GGG ACCGCGCA AAAAGCATGACATTT adiA 4601106 - 4598836 - | biodegradative arginine decarboxylase TERM 6144 4599151 - 4599169 + g 90 -7.4 -4.86731 | opp_overlap 4599154 GGAATAGGCTTCATT CAACCGTG CGC CAGGGTTG TTTTCTTTCAGCCAG TERM 6145 4599438 - 4599449 + g 72 -7.2 -4.20918 | CTGTGACCAGCGCCG CCGG AACA CCGG TTTCTTCCAGTTCAC TERM 6146 4599646 - 4599657 + g 70 -5.8 -4.20367 | TTTGCCGGTTTGTGG GTCG GTGA CGAC TTCTTTGTTCCACGG TERM 6147 4599982 - 4599972 - G 70 -6.8 -4.07687 | opp_overlap 4599972 AGTGGGTGGCGAAAA CGGT AGG ACCG TTGTGATCGCCAGGT melR 4602210 - 4601302 - | DNA-binding transcriptional dual regulator TERM 6148 4601655 - 4601641 - G 72 -5.6 -4.52589 | opp_overlap 4601651, overlap 4601643 CTGGCTGACATAAAA TTGCGC ATG GCGCGA GACGCTGTTTTTGTG TERM 6149 4601651 - 4601662 + g 74 -2.2 -5.03994 | gap 1, opp_overlap 4601643 4601641 TAAAATTGCGCATGG C-GCG AGA CGCTG TTTTTGTGTGTGCGC TERM 6150 4603145 - 4603133 - g 70 -6.9 -4.14511 | opp_overlap 4603133 4603135, overlap 4603134 AACTGGAGCGCAAAA CCGCC GAC GGCAG TTACGTGAATCTCTA TERM 6151 4603135 - 4603178 + G 80 -11.6 -3.28712 | opp_overlap 4603133 4603134, overlap 4603133 CTGGAGCGCAAAACC GCCGACGGCAGTTACGTGAA TCTC TACCCGGAACTGCTGGCGGC TTATGAAGCAGGGCA TERM 6152 4603738 - 4603713 - g 76 -7.6 -4.18494 | gap 1 TATTCTTACGGAAAA TCGCGACCGTG TTTAC CACG-CCGCGA TGATGGACCCGCATA melA 4602493 - 4603848 + | alpha-galactosidase, NAD(P)-binding yjdF 4604495 - 4603845 - | conserved hypothetical protein; putative inner membrane protein fumB 4606264 - 4604618 - | anaerobic class I fumarate hydratase (fumarase B) TERM 6153 4605238 - 4605253 + g 72 -4.7 -4.66163 | CTGGAATGTACTGGC CTGGA TTGTGT TCCAG TTTTTCGATCCAGAT TERM 6154 4605599 - 4605618 + g 75 -7.2 -4.36914 | gap 1 GTACGGCGGGCAGGC TGCAGTACC GAG GGTAC-GCA TTTTCTCGACGAGGA TERM 6155 4605619 - 4605635 + g 73 -3.7 -4.81249 | overlap 4605620 TACCGAGGGTACGCA TTTTCTC GAC GAGGAAG TTTTTCAGTTTGCCG TERM 6156 4606334 - 4606303 - R 78 -8.7 -4.13767 | opp_overlap 4606327 TTTGTTATTCGAAAA TGGCGTGCCGC GTAGTCACGG GCGGCACGCAA AGTGCATTTATAAGA dcuB 4607682 - 4606342 - | C4-dicarboxylate antiporter TERM 6157 4606778 - 4606789 + g 74 -2.2 -5.0538 | GCGATCATACCGGAA CGGA AGAC TTCG TTTTTTGAGATAGAC dcuR 4608972 - 4608253 - | DNA-binding response regulator in two-component regulatory system with DcuS dcuS 4610600 - 4608969 - | sensory histidine kinase in two-component regulatory system with DcuR, regulator of anaerobic fumarate respiration TERM 6158 4609418 - 4609405 - G 74 -2.3 -5.14563 | TTGCTGATTAAAAAA CCAGC GATA ACCGG AGATTTGATCTTACC yjdI 4610781 - 4611011 + | hypothetical protein yjdJ 4611023 - 4611295 + | putative acyltransferase with acyl-CoA N-acyltransferase domain yjdK 4611523 - 4611819 + | hypothetical protein TERM 6159 4612084 - 4612137 + T 73 -5.3 -4.62441 | opp_overlap 4612063 4612062 4612095 4612099 4612103, overlap 4612099 4612103 TCCTCAAAACTGGAT TTGCGGAATGACGAACGAAGCAGTC GCCT GACTGCTTCGTTCATTAAAGTGAAA TTTATTTCTGTGGGC TERM 6160 4612126 - 4612095 - T 100 -18.2 -2.71364 | opp_overlap 4612084 4612099 4612103, overlap 4612063 4612062 4612099 4612103 GGATTTGCGGAATGA CGAACGAAGCAGTC GCCT GACTGCTTCGTTCA TTAAAGTGAAATTTA TERM 6161 4612122 - 4612099 - T 100 -15.4 -3.27298 | opp_overlap 4612084 4612099 4612103, overlap 4612095 4612103 TTGCGGAATGACGAA CGAAGCAGTC GCCT GACTGCTTCG TTCATTAAAGTGAAA TERM 6162 4612099 - 4612122 + T 100 -15.4 -3.35813 | opp_overlap 4612099 4612095 4612103, overlap 4612084 4612103 TTGCGGAATGACGAA CGAAGCAGTC GCCT GACTGCTTCG TTCATTAAAGTGAAA TERM 6163 4612118 - 4612103 - T 73 -9 -3.43151 | opp_overlap 4612103 4612099 4612084, overlap 4612099 4612095 GGAATGACGAACGAA GCAGTC GCCT GACTGC TTCGTTCATTAAAGT TERM 6164 4612103 - 4612118 + T 73 -9 -3.45634 | opp_overlap 4612099 4612095 4612103, overlap 4612099 4612084 GGAATGACGAACGAA GCAGTC GCCT GACTGC TTCGTTCATTAAAGT lysU 4613656 - 4612139 - | lysine tRNA synthetase, inducible yjdL 4615350 - 4613893 - | putative transporter TERM 6165 4614737 - 4614750 + g 79 -2.3 -5.28778 | overlap 4614738 GGTAAGGCAAATTTG ACGCT TGTG AGCGC TTTTTTATCCATACT TERM 6166 4615374 - 4615395 + r 100 -14.5 -3.30619 | opp_overlap 4615374 CTTATGAGCAAAAAA GGGAAGTGG CAAG CCACTTCCC TTGTACGAGCTAATT TERM 6167 4615395 - 4615374 - R 100 -14.5 -5.1861 | opp_overlap 4615374 CTTATGAGCAAAAAA GGGAAGTGG CAAG CCACTTCCC TTGTACGAGCTAATT cadA 4617556 - 4615409 - | lysine decarboxylase 1 TERM 6168 4617618 - 4617579 - R 73 -2.7 -5.08824 | TCTCCAGGTAAAAAA GGCCCCTCCCAACACAT GGGACA AAATGAAAGGAGGAGCC TCGGAAAATACTTTT cadB 4618970 - 4617636 - | putative lysine/cadaverine transporter TERM 6169 4619264 - 4619238 - R 79 -5.1 -5.10461 | opp_overlap 4619236 4619238, overlap 4619239 4619241 TTTATGTAATAAAAA TTATGCGGCAA ATAAA TTGCCGCAACA TATTATACCAACGGG TERM 6170 4619261 - 4619241 - R 83 -11.2 -3.39664 | opp_overlap 4619238 4619236, overlap 4619239 4619238 ATGTAATAAAAATTA TGCGGCAA ATAAA TTGCCGCA ACATATTATACCAAC cadC 4620874 - 4619336 - | DNA-binding transcriptional activator TERM 6171 4620932 - 4620947 + H 72 -5.4 -4.49906 | overlap 4620933 CCATAACCTATTTTT TCCATC TATA GATGGG TTTATTTACATATTA ECS88_4638 4621161 - 4621379 + | hypothetical protein TERM 6172 4621478 - 4621459 - T 100 -13.6 -4.98531 | opp_overlap 4621459 TCCTGAAACGAAAAA CGGACCTC CGTG GAGGTCCG TTTATATGAATTTGG TERM 6173 4621459 - 4621478 + T 100 -13.6 -4.11295 | opp_overlap 4621459 TCCTGAAACGAAAAA CGGACCTC CGTG GAGGTCCG TTTATATGAATTTGG ECS88_4639 4622269 - 4621706 - | hypothetical protein TERM 6174 4622324 - 4622302 - R 100 -12.7 -4.61873 | GTTTATAAACGAAAA CGCCAGCCC TGTTC AGGCTGGCG TCAGGAGAATGGAGT TERM 6175 4622340 - 4622360 + r 71 -8.3 -3.42699 | TCAGGAGAATGGAGT CTGGTGAGT GAG ATTCACCGG TTCTGGTGCATAAGT yeeW 4622776 - 4622354 - | hypothetical protein TERM 6176 4622575 - 4622608 + g 76 -11.1 -3.41073 | overlap 4622573 TCACTGTATTGTCTT CCGGCAACTGATG AGGGCTGG CATAAGTTGCCGG TGTTTCGGTAGAGTC yeeV 4623150 - 4622773 - | toxin of the YeeV-YeeU toxin-antitoxin system; CP4-44 prophage TERM 6177 4623215 - 4623194 - R 70 -10.1 -2.55811 | overlap 4623193 4623192 GAAAAATGGAAAAGT GGCGTGGTG AAAG CACCAGGCC GAGCAGAAGGTTATT yeeU 4623607 - 4623239 - | antitoxin of the YeeV-YeeU toxin-antitoxin system; CP4-44 prophage TERM 6178 4623354 - 4623391 + g 74 -8.5 -4.00042 | gap 1 ACGGTATGCTGATGG CGGGGATTCA-GTTCACC GCT GGTGAGCATGAGTTCCAG TTGTTTCATCAGCAG yeeT 4623908 - 4623687 - | conserved hypothetical protein; CP4-44 prophage yeeS 4624441 - 4623995 - | putative DNA repair protein; CP4-44 prophage ECS88_4645 4625037 - 4624486 - | conserved hypothetical protein; Putative antirestriction protein TERM 6179 4625136 - 4625086 - R 73 -9.1 -3.54129 | gap 2 GATATTCGGCTGAAA TTCCGGACAGCCGTACGCGTAACCG TTC CGGTCACA-G-ACGGATGGCCAGAA GATGCCATTGCCTGT TERM 6180 4625153 - 4625172 + r 80 -10.8 -3.29144 | ATGCCATTGCCTGTA CTCAGTCT GCAC AGACTGAG TTCTCCGGGGCGTCG ECS88_4646 4626049 - 4625231 - | hypothetical protein TERM 6181 4626117 - 4626090 - R 100 -19.2 -4.61873 | CGGTATAAACGAAAA GGCCGCGTCTCC CGGA GAAGACGCGGCC TGATGGATGAAATGA ECS88_4647 4626372 - 4626139 - | hypothetical protein ECS88_4648 4627163 - 4626378 - | conserved hypothetical protein; putative exported protein ECS88_4649 4627886 - 4627206 - | putative HTH-type transcriptional regulator yfjR TERM 6182 4627281 - 4627270 - G 74 -5.8 -4.52857 | AGGGCGGAGATAAAA CGCT CTTC AGCG ACCAGATTGTGGATG ECS88_4650 4628973 - 4628089 - | conserved hypothetical protein; putataive GTPase TERM 6183 4629000 - 4629018 + H 72 -7.4 -4.0616 | opp_overlap 4629000, overlap 4628996 GTTGATTTCACTGAA CCGGATCA CAC TAATCCGG TTTATCATTCAGGTA TERM 6184 4629018 - 4629000 - H 71 -9.6 -3.06796 | opp_overlap 4629000 4628996 GTTGATTTCACTGAA CCGGATCA CAC TAATCCGG TTTATCATTCAGGTA TERM 6185 4629763 - 4629753 - g 71 -3.2 -4.73614 | overlap 4629762 TAGCACGAAAACAAA CCTC AGA AAGG AATAAAGGCGGTCTC TERM 6186 4629809 - 4629797 - g 100 -6.3 -5.89921 | opp_overlap 4629797 ACCAGAATAAAAAAA GAAAG TGA CTTTC TTTCTATGGATAGAT ECS88_4651 4629074 - 4630297 + | hypothetical protein TERM 6187 4631507 - 4631517 + F 72 -3.2 -4.88405 | AAAGCGTTCTGATTG CGTT TCT GACG TTTTGTTTGCGCGTT ECS88_4652 4631750 - 4632481 + | hypothetical protein ECS88_4653 4632639 - 4633403 + | hypothetical protein ECS88_4654 4633472 - 4633705 + | hypothetical protein ECS88_4655 4633932 - 4633741 - | hypothetical protein TERM 6188 4633851 - 4633865 + g 74 -7.8 -4.08974 | TCATTCCCTTCGTCC CGCCAG TCA CTGGTG TTTGTATCGTACCGT ECS88_4657 4634454 - 4635518 + | hypothetical protein TERM 6189 4635566 - 4635530 - f 71 -8.1 -3.82433 | overlap 4635533 ATAAGCATGAGTAAA TATTCAGGTGCAGTA AACAACA TACTGCGCCTGAGTA AATGGCTGTTGGGTT TERM 6190 4635696 - 4635707 + G 72 -5.8 -4.36914 | CAAATCCTGGATGTG GCAG AGTT CTGC TTTTGTGAGACGGGC ECS88_4658 4635618 - 4635989 + | hypothetical protein TERM 6191 4636471 - 4636441 - g 76 -7.6 -4.29508 | AGGTATATTAATAAA TGCAGCAGAAGAAC TAC GTTCTACTACTGAA TCGGTCACGACTATC ECS88_4659 4636261 - 4636470 + | hypothetical protein TERM 6192 4636868 - 4636886 + T 77 -2.2 -5.4387 | opp_overlap 4636868, overlap 4636872 GGGGCCGTGTCAAAG CCGCCCGC TAT GCAGATGG TTTTTTACTTTATCT TERM 6193 4636945 - 4636916 - T 100 -10.1 -5.63103 | TGTTAAGCAAAAAAA TGCCGCGATAA AGAAATTG TTACCGCGGCA GCGTCATAGCAATTT ECS88_4661 4637604 - 4636963 - | conserved hypothetical protein with microcompartments protein domain metK 4638704 - 4637553 - | S-adenosylmethionine synthetase (Methionine adenosyltransferase) ECS88_4664 4639888 - 4638833 - | hypothetical protein ECS88_4665 4641167 - 4639905 - | conserved hypothetical protein with histidine kinase domain TERM 6194 4639945 - 4639955 + g 72 -6.8 -4.1711 | overlap 4639938 AGTTTAATGGTTGTA CCCA TCC TGGG TTTGTTAGGGCTCAT TERM 6195 4641352 - 4641338 - R 93 -11.4 -4.27117 | CTGCCACAATACAAA CGCCAG TTA CTGGCG ATACGAATGGAATGA TERM 6196 4641403 - 4641422 + r 76 -7.8 -4.20696 | opp_overlap 4641402 CCCCACATGAACGAT CACCACCT ACAT AGGAGGTG TTTTAAAATTGATCG TERM 6197 4641539 - 4641516 - R 76 -11 -3.05844 | opp_overlap 4641499 4641493 4641528 CGGTTCATGTTAACA CTGGAACTGC CTCT GCTGTTCCAG CAGTGATATCAGACC TERM 6198 4641528 - 4641542 + r 70 -10 -2.62396 | opp_overlap 4641516, overlap 4641493 ACACTGGAACTGCCT CTGCTG TTC CAGCAG TGATATCAGACCCTG TERM 6199 4641667 - 4641681 + r 70 -7.1 -3.91488 | CTGTCCTTACTCAGT CCTGC TCTTT GCAGG TTCTTTGCCCGGGTT ECS88_4667 4642238 - 4641717 - | putative maturase-related protein TERM 6200 4641979 - 4641996 + g 86 -10.5 -3.8917 | AACTTCCGATCCCAC GGGCGCG CCAC CGCGCTC TTCTTCTCATTCACC ECS88_4669 4642805 - 4642266 - | putative maturase-related protein TERM 6201 4643251 - 4643273 + r 100 -10.6 -5.18726 | opp_overlap 4643251 CGCACATAACAAAAA GCCAGCAG GCAGACA CTGCTGGC TTTTTGTTATGGCGG TERM 6202 4643273 - 4643251 - R 100 -10.6 -5.24796 | opp_overlap 4643251 CGCACATAACAAAAA GCCAGCAG GCAGACA CTGCTGGC TTTTTGTTATGGCGG ECS88_4670 4644196 - 4643291 - | conserved hypothetical protein; putative membrane protein; putative permease TERM 6203 4643634 - 4643621 - G 72 -4.5 -4.59773 | CTTCAGGCCTAAAAA GCCTG CCAT CAAGC CAATACCCAAGCCCA ECS88_4671 4645250 - 4644333 - | putative pyruvate formate-lyase 3-activating enzyme TERM 6204 4645350 - 4645325 - R 95 -12.7 -3.6053 | opp_overlap 4645325, overlap 4645321 TCGTGGAGAAAGTAA CGGGCTATATA TTGA TACATAGCCCG TCTGGTATTTACGAC TERM 6205 4645325 - 4645350 + r 72 -10.5 -2.97021 | opp_overlap 4645321 4645325 TCGTGGAGAAAGTAA CGGGCTATATA TTGA TACATAGCCCG TCTGGTATTTACGAC ECS88_4672 4647911 - 4645359 - | putative Formate C-acetyltransferase TERM 6206 4645459 - 4645476 + g 78 -5.6 -4.87786 | opp_overlap 4645459, overlap 4645452 4645469 ACGCGTACCACCAGA TCCTGA TGTTGC TCAGGA TTTTTCTGGGCTTCG TERM 6207 4647120 - 4647108 - G 76 -7.7 -4.1552 | CATGCTCTGAATAAA CCAGA ATG TCTGG CATGCTTCCCAGAAT ECS88_4673 4648670 - 4647960 - | conserved hypothetical protein with intracelllular protease 1 domain ECS88_4674 4648845 - 4648546 - | hypothetical protein ECS88_4675 4650386 - 4648869 - | putative acetaldehyde/propionaldehyde dehydrogenase (eutE-like) TERM 6208 4649030 - 4649053 + g 72 -6 -4.30034 | gap 1, overlap 4649014 CATTTTTAACAAAGA TGGTG-GTCTG GAT CAGGCGCGCCA TTTTGGTCAGCTTTT TERM 6209 4649554 - 4649570 + g 74 -2.1 -5.1101 | opp_overlap 4649539 GCTGGCGGGTTACCT GCGCCTG CAC CAATCGC TTTTTTACCTGATGA TERM 6210 4649969 - 4649979 + g 75 -4.6 -4.78764 | CTGGCGTTTTCAGCG CTGC GAC GCGG TTTTTGATCAGTTTG ECS88_4676 4651232 - 4650447 - | putative propanediol utilization protein, polyhedral bodies (pduB-like) TERM 6211 4650719 - 4650731 + g 70 -6.2 -4.1552 | AGGATTTACCAATCG GCGC ACCCA GCGC TTTATTCAGCGCGTA TERM 6212 4651166 - 4651180 + g 73 -4.2 -4.73297 | CTGCTGTTTTAGCTT CCGGTG AGA TATCGG TTTGTTTATTCATTA ECS88_4677 4651586 - 4651254 - | putative propanediol utilization protein, polyhedral bodies (pduA-like) ECS88_4678 4653127 - 4651820 - | Putative Acetate/propionate kinase ECS88_4680 4653542 - 4653045 - | hypothetical protein ECS88_4681 4653839 - 4653570 - | putative Ethanolamine utilization protein (eutN-like) ECS88_4682 4654576 - 4653851 - | hypothetical protein ECS88_4683 4655318 - 4654560 - | putative ethanolamine utilization protein (eutJ-like) ECS88_4684 4656059 - 4655373 - | conserved hypothetical protein involved in propanediol utilization protein (pduL-like) TERM 6213 4655969 - 4655986 + g 100 -12.7 -5.55664 | opp_overlap 4655953 TCAGCGCGACAGGCG CGGCAGC AGGC GCTGCCG TTTTTTTACTGGTGG ECS88_4685 4657317 - 4656199 - | putative propanol dehydrogenase TERM 6214 4657590 - 4657622 + H 93 -11.4 -4.15833 | gap 1, opp_overlap 4657589 AAAGGCTTCAATGAC TCTCCGCC-ATGGCA AACA TGCCATAGGGGGAGA TTTTCAGATAATGAT ECS88_4686 4657766 - 4658167 + | hypothetical protein ECS88_4687 4658188 - 4658496 + | hypothetical protein ECS88_4688 4658740 - 4658549 - | hypothetical protein ECS88_4689 4659188 - 4659316 + | hypothetical protein TERM 6215 4659693 - 4659679 - g 82 -2.7 -5.24129 | overlap 4659680 TGCCTTTACAAAAAA TCGCC AACGG GGCGG TCGGGCACTGTCTGG ECS88_4690 4659333 - 4659770 + | conserved hypothetical protein; putative exported protein ECS88_4691 4659842 - 4660240 + | hypothetical protein ECS88_4692 4660254 - 4660355 + | hypothetical protein TERM 6216 4660386 - 4660396 + F 74 -5.4 -4.63863 | overlap 4660382 4660388 GGAGGGGATATGTCT GTCA GGC TGAC TTGTTTTTCTCTTAA TERM 6217 4660388 - 4660399 + F 71 -2.2 -5.10767 | overlap 4660382 4660386 AGGGGATATGTCTGT CAGG CTGA CTTG TTTTTCTCTTAAATA TERM 6218 4660718 - 4660706 - g 71 -2.7 -4.87626 | TCCTAAGAGTAAAAA TAAGT GTA ACTCA AAGAATAATAAAAAG ECS88_4693 4660479 - 4662077 + | hypothetical protein TERM 6219 4662537 - 4662522 - g 73 -4 -4.8048 | overlap 4662528 CCCTTATATCAAAAA CTAAGA GACT CCTTAG TCGAGTTGATGGTTT TERM 6220 4662746 - 4662717 - g 95 -10.9 -4.52669 | overlap 4662718 AAGAAGGTAAAGAAA CTGCTTGTGGTTT GATT AAACCACAAACAA AAAAAAGCCCCCCTC TERM 6221 4662745 - 4662718 - g 83 -12.2 -3.29975 | overlap 4662717 AGAAGGTAAAGAAAC TGCTTGTGGTTT GATT AAACCACAAACA AAAAAAAGCCCCCCT TERM 6222 4663389 - 4663403 + G 77 -5.8 -4.59109 | opp_overlap 4663389 TGGATGAAGCAATTA TTACTA AGC TAGTAA TTTTTGAACGCTGTG ECS88_4694 4662209 - 4663993 + | hypothetical protein ECS88_4695 4663993 - 4664745 + | hypothetical protein ECS88_4696 4664727 - 4666046 + | hypothetical protein ECS88_4697 4666043 - 4666768 + | conserved hypothetical protein; putative DNAse ECS88_4698 4666990 - 4667187 + | hypothetical protein ECS88_4699 4667896 - 4667321 - | hypothetical protein TERM 6223 4667376 - 4667356 - G 73 -3.9 -4.81551 | overlap 4667359 CAGCTATAGTAAAAA TGATCGCCA GAC TGGCGAGAA AGCAGAGCGAAAGCG TERM 6224 4667373 - 4667359 - G 72 -10 -3.30658 | overlap 4667356 CTATAGTAAAAATGA TCGCCA GAC TGGCGA GAAAGCAGAGCGAAA ECS88_4700 4669232 - 4667904 - | hypothetical protein TERM 6225 4668734 - 4668776 + g 70 -4.9 -4.46212 | gap 1, opp_overlap 4668748, overlap 4668735 4668736 GCAGATTATTGGATT TATCT-CGCGAAAATGCGGT CATG GCCGCCTTTTCGTGAAGAGG TTTTGTAATGCGCCA TERM 6226 4669024 - 4669046 + g 77 -6.3 -4.66987 | opp_overlap 4669025, overlap 4669025 GGGGGCATAATATAA AGCATATCC AGATC GGATATGCC TTTTATTGCGGTATG TERM 6227 4669045 - 4669025 - G 91 -10.5 -4.27117 | opp_overlap 4669024 4669025 GGGGCATAATATAAA GCATATCCA GAT CGGATATGC CTTTTATTGCGGTAT TERM 6228 4669025 - 4669045 + g 72 -9.8 -3.39469 | opp_overlap 4669025, overlap 4669024 GGGGCATAATATAAA GCATATCC AGATC GGATATGC CTTTTATTGCGGTAT TERM 6229 4669301 - 4669290 - R 73 -4.4 -4.8667 | TACACCTTATAAAAA CCAA GATC TTGG GAGGTGAGCGTTCTG ECS88_4702 4670385 - 4669573 - | Transposase insF for insertion sequence IS3A/B/C/D/E/fA ECS88_4703 4670765 - 4670442 - | transposase ORF A, IS3 family ECS88_4704 4671176 - 4670799 - | conserved hypothetical protein; putative Zn-dependent alcohol dehydrogenases ECS88_4705 4671763 - 4671539 - | hypothetical protein ECS88_4706 4672158 - 4671799 - | transposase InsB (ORF2) IS1 ECS88_4707 4672457 - 4672185 - | transposase InsA (ORF1) IS1 ECS88_4708 4672710 - 4674179 + | putative membrane protein of unknown function TERM 6230 4674378 - 4674390 + G 72 -6.9 -4.21098 | opp_overlap 4674372 4674377, overlap 4674379 AGCTTCAAACCGAAC TCGCG GAA CGCGG TTTTAAAATTCATAT TERM 6231 4674451 - 4674468 + G 70 -4.1 -4.72272 | CATCGAAAAAAGCCC CCAATAC AGCG GGATTGG TTTTTACTGGGAGCC ECS88_4709 4674284 - 4676653 + | putative Orn/Lys/Arg decarboxylase TERM 6232 4676699 - 4676670 - f 100 -15.1 -4.08557 | opp_overlap 4676670 4676669 4676667, overlap 4676672 CGGGGGAAAGAACAA TACCGTCGGATCG CCTG CAATCCGACGGCA ATATTATAGAATAGC TERM 6233 4676670 - 4676699 + F 74 -10.7 -2.53822 | opp_overlap 4676670 4676672, overlap 4676669 4676667 CGGGGGAAAGAACAA TACCGTCGGATCG CCTG CAATCCGACGGCA ATATTATAGAATAGC TERM 6234 4676697 - 4676672 - f 100 -15.5 -3.63464 | opp_overlap 4676670 4676669 4676667, overlap 4676670 GGGGAAAGAACAATA CCGTCGGATCG CCTG CAATCCGACGG CAATATTATAGAATA TERM 6235 4676816 - 4676759 - g 95 -12.1 -4.19215 | opp_overlap 4676760 4676766, overlap 4676760 CAGATGTAAAAAATA GTGACAATAGCGCCGGAGGACATAAGC TGGG GCTTATATCCCTCATCGCTATTGTCGT TAGCTCCATGCTGGG TERM 6236 4676815 - 4676760 - g 95 -15.6 -3.10444 | opp_overlap 4676760 4676766, overlap 4676759 AGATGTAAAAAATAG TGACAATAGCGCCGGAGGACATAAGC TGGG GCTTATATCCCTCATCGCTATTGTCG TTAGCTCCATGCTGG TERM 6237 4676760 - 4676815 + G 83 -13.4 -3.08464 | opp_overlap 4676759 4676760, overlap 4676766 AGATGTAAAAAATAG TGACAATAGCGCCGGAGGACATAAGC TGGG GCTTATATCCCTCATCGCTATTGTCG TTAGCTCCATGCTGG TERM 6238 4676907 - 4676920 + G 75 -4.5 -4.77173 | CATTGCATGGATTAT TGCCG GGAT CGGTA TTTATTTTATCGCAA TERM 6239 4677980 - 4677970 - g 88 -2.4 -5.48825 | opp_overlap 4677971 4677972 4677977, overlap 4677972 CAGTATGCAAAAAAA GGCC GCA GGCT GGCTTTGTCCAGCGG ECS88_4710 4676728 - 4678227 + | putative membrane protein; putative Amino acid transporters insA 4678370 - 4678645 + | IS1 repressor protein InsA insB 4678564 - 4679067 + | IS1 transposase InsAB' ECS88_4713 4680085 - 4679534 - | Putative HTH-type transcriptional regulator TERM 6240 4680766 - 4680724 - R 100 -11.2 -4.65916 | opp_overlap 4680733, overlap 4680725 4680728 TGCAGGCGAATAAAA CTGATGTCGCCGCACCAGAC GCG GTCTGGTGCGGCGGGGTGAA ATTGCCGGTTCAGTA TERM 6241 4680765 - 4680725 - R 90 -12.5 -3.39068 | opp_overlap 4680733, overlap 4680724 4680728 GCAGGCGAATAAAAC TGATGTCGCCGCACCAGAC GCG GTCTGGTGCGGCGGGGTGA AATTGCCGGTTCAGT TERM 6242 4680762 - 4680728 - R 89 -14.2 -2.84841 | opp_overlap 4680733, overlap 4680725 4680724 GGCGAATAAAACTGA TGTCGCCGCACCAGAC GCG GTCTGGTGCGGCGGGG TGAAATTGCCGGTTC insB 4681563 - 4681060 - | IS1 transposase InsAB' insA 4681757 - 4681482 - | IS1 repressor protein InsA TERM 6243 4682215 - 4682195 - R 100 -13.3 -3.7697 | ATATTCAGAAGATAA CCCCTGGCT GAC AACCAGGGG AAGGGAGCATTAACA ECS88_4719 4683360 - 4682287 - | putative homolog to shiA (SHI-2 pathogenicity island of Shigella flexneri) TERM 6244 4683506 - 4683483 - R 71 -10.4 -2.75712 | gap 1, opp_overlap 4683488, overlap 4683480 4683486 TGAGTTATTGAATGA GAACC-TCAGC CTG GCTGATGGTTC CGCCGGCATAAAAAA TERM 6245 4683540 - 4683565 + r 81 -11.9 -3.0094 | ATTGATTGAGGCGGG TGCTCTTCCCC TTAA GAGGAAGAGCA TGTGTGTAAATGGCG ECS88_4720 4684851 - 4683586 - | integrase TERM 6246 4684637 - 4684650 + g 70 -5.2 -4.386 | TCCGAAATCAGTTTT CGGG CCTCAT CCCG TTTTGTACGAGCTTC TERM 6247 4685017 - 4685036 + r 100 -13.6 -3.27994 | opp_overlap 4685017 TTCTGAAACGAAAAA CGGACCTC CGTG GAGGTCCG TTGATATGAACTTGG TERM 6248 4685036 - 4685017 - R 100 -13.6 -4.98531 | opp_overlap 4685017 TTCTGAAACGAAAAA CGGACCTC CGTG GAGGTCCG TTGATATGAACTTGG TERM 6249 4685082 - 4685098 + r 74 -10.9 -2.62616 | opp_overlap 4685081 4685079 4685076 TCGAACCAAGGACAC GGGGATT TTC AATCCCC TGCTCTACCGACTGA yjdC 4685806 - 4685231 - | putative transcriptional regulator dipZ 4687540 - 4685843 - | fused thiol:disulfide interchange protein: activator of DsbC ; conserved hypothetical protein cutA 4687854 - 4687516 - | copper binding protein, copper sensitivity TERM 6250 4687960 - 4687941 - R 100 -16.4 -4.41348 | opp_overlap 4687956 TCGGCGGGAAAGAAA GCGGGGCG TGAA CGCCCCGC GATGGGTCATTACAG dcuA 4689271 - 4687970 - | C4-dicarboxylate antiporter TERM 6251 4689340 - 4689365 + r 82 -7.5 -4.59342 | opp_overlap 4689343, overlap 4689343 ACTACTCACAAGAAA AAAGGCACGCC ATCT GACGTGCCTTC TTTATTTGTACTACC TERM 6252 4689343 - 4689362 + r 85 -9.2 -4.39652 | opp_overlap 4689343, overlap 4689340 ACTCACAAGAAAAAA GGCACGCC ATCT GACGTGCC TTCTTTATTTGTACT TERM 6253 4689362 - 4689343 - R 100 -11.4 -5.56673 | opp_overlap 4689340 4689343 ACTCACAAGAAAAAA GGCACGCC ATCT GACGTGCC TTCTTTATTTGTACT aspA 4690825 - 4689389 - | aspartate ammonia-lyase TERM 6254 4690254 - 4690266 + g 74 -7.7 -4.13282 | overlap 4690245 ACTGCGTCCTGCAGC TGGGT ACG ACCCA TTTTCAGGATGTCCT TERM 6255 4690689 - 4690704 + g 71 -2.6 -4.92757 | gap 1, opp_overlap 4690689, overlap 4690684 ATACCGCGAACAAAT TCAG-GA ATA TCACTGA TTTTGTTGTTGCTGA TERM 6256 4691123 - 4691144 + H 71 -9.4 -3.01712 | overlap 4691120 TCGCAACCCATTCAG GTAGCCGG GTTTAA CCGGCTGC TATTACAGGAGAAAC fxsA 4691162 - 4691638 + | inner membrane protein yjeH 4692910 - 4691654 - | transporter TERM 6257 4692784 - 4692772 - G 77 -6.9 -4.56314 | opp_overlap 4692777, overlap 4692773 CTAAGATAATCAAAA CGGGC CAC GCCCA CAGGCTGTTATTGCC TERM 6258 4692875 - 4692889 + g 70 -7.1 -4.10744 | opp_overlap 4692865 TAGCAGGCCGATGCC CTGGG CCAGC CCCAG TTCTTGTTTGAGTCC groS 4693186 - 4693479 + | Cpn10 chaperonin GroES, small subunit of GroESL TERM 6259 4694534 - 4694506 - g 76 -9.5 -3.72374 | overlap 4694504 TGTGATCAACAAAGA CACCACCACCATC ATC GATGGCGTGGGTG AAGAAGCTGCAATCC groL 4693523 - 4695169 + | Cpn60 chaperonin GroEL, large subunit of GroESL TERM 6260 4695222 - 4695199 - f 86 -8 -4.83246 | opp_overlap 4695199 GCAGAAATAAACAAA CCCCCGGGCA GAAA TGTCTGGGGG TTTTTCTTTTGGTCA TERM 6261 4695199 - 4695222 + F 100 -12.4 -5.50723 | opp_overlap 4695199 GCAGAAATAAACAAA CCCCCGGGCA GAAA TGTCTGGGGG TTTTTCTTTTGGTCA yjeI 4695307 - 4695660 + | hypothetical protein yjeJ 4696579 - 4695710 - | hypothetical protein TERM 6262 4696824 - 4696845 + r 79 -7.9 -4.30978 | ATCAGTTACTGCTGG CGTAGCTGG AGAT CCAGCGGCG TTTTGCTGGGTTCGC yjeK 4697842 - 4696814 - | putative lysine aminomutase efp 4697884 - 4698450 + | Elongation factor EF-P TERM 6263 4698455 - 4698486 + F 100 -13 -3.65046 | overlap 4698459 GCGTGAAGTAATGCG GTTGTGGTGCGGCC TGCA GGCTGCACCATCAC TTATTCAGGTCAGAG TERM 6264 4698459 - 4698482 + F 89 -14.6 -2.66106 | overlap 4698455 GAAGTAATGCGGTTG TGGTGCGGCC TGCA GGCTGCACCA TCACTTATTCAGGTC ecnA 4698502 - 4698627 + | entericidin A membrane lipoprotein, antidote entericidin B ecnB 4698738 - 4698884 + | entericidin B membrane lipoprotein TERM 6265 4698888 - 4698919 + F 91 -8 -5.26316 | opp_overlap 4698892, overlap 4698892 GCGCAGCAATAAGCA ATAACGGTACGACA GCTG TGTCGTGCCGTTTG TTTTTTCTGCGATAG TERM 6266 4698915 - 4698892 - f 86 -11 -3.90559 | opp_overlap 4698888 4698892 AGCAATAAGCAATAA CGGTACGACA GCTG TGTCGTGCCG TTTGTTTTTTCTGCG TERM 6267 4698892 - 4698915 + F 100 -13.2 -5.13354 | opp_overlap 4698892, overlap 4698888 AGCAATAAGCAATAA CGGTACGACA GCTG TGTCGTGCCG TTTGTTTTTTCTGCG sugE 4699060 - 4699377 + | multidrug efflux system protein blc 4699907 - 4699374 - | outer membrane lipoprotein (lipocalin) TERM 6268 4699985 - 4699968 - R 100 -11.3 -4.46581 | overlap 4699959 GAAAAGCGGAGAAAA GGTCCGA AAAT TCGGACC CGATGAAATTTTACT ampC 4701129 - 4699996 - | beta-lactamase/D-alanine carboxypeptidase TERM 6269 4701151 - 4701174 + r 80 -10.2 -3.75629 | gap 1, opp_overlap 4701152 4701153, overlap 4701152 TGGTTTCCATACAAA AC-GGCCCGCC ATA GGCGGGCCAGA TTTACATTGGCGATG TERM 6270 4701152 - 4701173 + r 87 -13.7 -2.85056 | gap 1, opp_overlap 4701152 4701153, overlap 4701151 GGTTTCCATACAAAA C-GGCCCGCC ATA GGCGGGCCAG ATTTACATTGGCGAT TERM 6271 4701172 - 4701152 - R 100 -16.1 -4.52589 | opp_overlap 4701152 4701151, overlap 4701153 GGTTTCCATACAAAA CGGCCCGCC ATA GGCGGGCCA GATTTACATTGGCGA TERM 6272 4701171 - 4701153 - R 100 -17.4 -3.31232 | opp_overlap 4701152 4701151, overlap 4701152 GTTTCCATACAAAAC GGCCCGCC ATA GGCGGGCC AGATTTACATTGGCG frdD 4701551 - 4701192 - | fumarate reductase (anaerobic), membrane anchor subunit frdC 4701957 - 4701562 - | fumarate reductase (anaerobic), membrane anchor subunit frdB 4702702 - 4701968 - | fumarate reductase (anaerobic), Fe-S subunit frdA 4704503 - 4702695 - | fumarate reductase (anaerobic) catalytic and NAD/flavoprotein subunit TERM 6273 4703506 - 4703531 + g 79 -2.6 -5.24129 | gap 1, overlap 4703508 GCTTTCGCCAGTTCG CAG-ATGAACG GCAGA CGTTCATGCAG TTTTTTCTCGCCGAG TERM 6274 4703592 - 4703570 - G 75 -12 -2.94144 | opp_overlap 4703568 4703561 4703570 4703580, overlap 4703567 4703572 GGTCGAGGTAAACCA CATCGCCACG TGG CGTGGAGATG GTGTTGCCTTTACGC TERM 6275 4703570 - 4703592 + g 72 -12 -2.51888 | opp_overlap 4703570 4703567 4703572, overlap 4703568 4703561 4703580 GGTCGAGGTAAACCA CATCGCCACG TGG CGTGGAGATG GTGTTGCCTTTACGC TERM 6276 4705632 - 4705644 + G 70 -10.5 -2.71712 | overlap 4705631 CAAGATAACCGTAAG CGCGC GGC GCGCG GTTTGCCGCAGCACC poxA 4704828 - 4705805 + | lysyl-tRNA synthetase TERM 6277 4705857 - 4705835 - f 70 -9.2 -3.21806 | opp_overlap 4705830 4705829 4705838, overlap 4705830 4705838 TGAATTAACAGCGAA GAATGGCG TGATAAG CGCCATTC TGTAGCATATGTTTT TERM 6278 4706065 - 4706044 - g 82 -3 -5.26316 | opp_overlap 4706044 4706046 4706061, overlap 4706046 TCACTCGATAAAAAA GATGAGTC TGATAG GACTCATA TTGATGATCTTTACT TERM 6279 4706550 - 4706564 + G 83 -5.8 -4.91084 | ATTTAGTATTGCTGT TAGTAA GCA TTACTA TTTTGTTATTAAATG yjeM 4706024 - 4707526 + | putative transporter TERM 6280 4707576 - 4707537 - f 82 -10.1 -3.8647 | gap 1, opp_overlap 4707545 ACTGATCATATGAAA TCCTG-CAACTCATCGTC TCTCC GGCGATGAGTTGTCTGGA AAGGAAGACGTTATG TERM 6281 4707545 - 4707567 + F 75 -9.9 -3.48276 | opp_overlap 4707537 TATGAAATCCTGCAA CTCATCGTC TCTCC GGCGATGAG TTGTCTGGAAAGGAA yjeN 4707589 - 4707903 + | hypothetical protein TERM 6282 4708154 - 4708128 - g 85 -3 -5.40072 | gap 1, opp_overlap 4708146 TTGTGGCGAAAAAAA CGCGGCTGG TTTATGTACG CCA-CCGCG CTGGCTATTTTCGGC yjeO 4707900 - 4708214 + | conserved hypothetical protein; putative inner membrane protein TERM 6283 4708234 - 4708215 - T 100 -13.6 -3.28924 | CAGTTTTGCTTATAA GCCGGATG GGTT CATCCGGC CACAAAGACCTTACA yjeP 4711568 - 4708245 - | putative mechanosensitive channel TERM 6284 4708751 - 4708772 + g 72 -5.7 -4.56775 | opp_overlap 4708729 GATCGCGGATCGTTA CCGTATCGC CAAT GCGAATCGG TTTTTCGAACAGGAT psd 4712558 - 4711590 - | phosphatidylserine decarboxylase rsgA 4713707 - 4712655 - | ribosome small subunit-dependent GTPase A orn 4713802 - 4714347 + | oligoribonuclease TERM 6285 4714467 - 4714449 - Tf 72 -3.2 -4.9792 | CACTTGAGATAAAAA CTCAAAAA AAA TTTTTTAG GGGGGTTGCAGAGGG TERM 6286 4714600 - 4714584 - Tf 74 -10.9 -2.62616 | TCAGTTGGTAGAGCA CGACCTT GCC AAGGTCG GGGTCGCGAGTTCGA TERM 6287 4714658 - 4714645 - Tf 72 -6.7 -4.28049 | TCCAAAATTTGAAAA GTGCT GTAA AGCAC AGACCACCCAAGCGG TERM 6288 4714712 - 4714696 - Tf 74 -10.9 -2.62616 | TCAGTTGGTAGAGCA CGACCTT GCC AAGGTCG GGGTCGCGAGTTCGA TERM 6289 4714823 - 4714807 - Tf 74 -10.9 -2.62616 | TCAGTTGGTAGAGCA CGACCTT GCC AAGGTCG GGGTCGCGAGTTCGA TERM 6290 4714879 - 4714906 + TF 77 -3.4 -5.27206 | gap 1, overlap 4714882 CTCTCAATAAAATAT CCA-CAGCGACGC GAT GCGTTATTGCTGG TTTTTGTTGTCTCTG TERM 6291 4715046 - 4715068 + TF 75 -4.9 -4.78753 | overlap 4715048 AATTAAGATTCCGTT TTGTCGAGT CGATC ACTTGACGA TTTTATTCATCTTGA yjeS 4716265 - 4715126 - | putative Fe-S electron transport protein TERM 6292 4715972 - 4715958 - Gf 76 -10 -3.32844 | opp_overlap 4715957 4715956 CGGCCCAGCGCATAA CGGCTA ACA TAGCCG AGTTTGGGATTTTTC TERM 6293 4716807 - 4716793 - gH 73 -9.2 -3.53012 | GCCTTCTGGCTGAAA CCGGCG CTA CGCCAG GCGCGGTAATCAACG yjeF 4716264 - 4717811 + | putative carbohydrate kinase yjeE 4717783 - 4718244 + | ATPase with strong ADP affinity TERM 6294 4719384 - 4719343 - g 70 -6 -4.27886 | gap 3, opp_overlap 4719352 4719357 4719363 GGCGAAATACATAAA CGCCG-AC-CAGAACACGCGA GTC TCG-GCGTTCTGCGTTCGCCG GATATTCCGTCAGTA amiB 4718263 - 4719600 + | N-acetylmuramoyl-l-alanine amidase II TERM 6295 4719832 - 4719805 - g 90 -6.8 -5.14563 | TGCGGTATCAAAAAA GACGAGCTGGCG CTGG CGCTGGCGCGTC ATGCCACCAGTAAAA TERM 6296 4720900 - 4720867 - g 73 -3.7 -4.78661 | overlap 4720868 ATGCAAAAACCAAAA GCGCCAGAACCGCAG GAAC CTGCACTTGCGGCGA ACAGTCAGAGTTTTG mutL 4719610 - 4721457 + | methyl-directed mismatch repair protein miaA 4721450 - 4722400 + | delta(2)-isopentenylpyrophosphate tRNA-adenosine transferase TERM 6297 4722514 - 4722541 + G 81 -12.8 -3.14528 | gap 1, opp_overlap 4722513 4722510, overlap 4722507 AATCTTTACAAGATC CGTTCCTGAACGC ACT GCGT-CGGGAACG TGTTCCAGTTTCTAT TERM 6298 4722717 - 4722707 - g 72 -8.2 -3.78778 | overlap 4722708 TCATCACAGTAACAA CGCC GGT GGCG GTACCAGCAGTAACT hfq 4722486 - 4722794 + | HF-I, host factor for RNA phage Q beta replication TERM 6299 4723763 - 4723751 - g 71 -3.3 -4.77165 | GCGTGTACAAGAAAA CATCG AAG CGGTG AATACGGTTCTTGAA TERM 6300 4723914 - 4723878 - g 90 -9.5 -4.4768 | overlap 4723874 GATGAAGAGAACAAA CCGATCCGTGTCTG-GC TTTCT GCGCAGAC-CGGAGCGG GGATACCACAGCTTT hflX 4722870 - 4724150 + | putative GTPase TERM 6301 4724450 - 4724473 + G 70 -10.9 -2.73364 | opp_overlap 4724413 GTTCATCGCAAGGCC CGCGCCCGC AGCTTG GCGGTCGCG TCGTTACCATCGCAG TERM 6302 4724553 - 4724542 - g 70 -7.2 -4.03811 | opp_overlap 4724552 TATACCATTAAAGAA GCCG AACG CGGC GTGGTAACACGCTTT TERM 6303 4725248 - 4725235 - g 75 -5.3 -4.69664 | GAGACGATGGAAAAA GTGTT GGGC AACAC CCGCAAAGTGCTGGT TERM 6304 4725467 - 4725448 - g 81 -12.8 -3.1994 | GATATTATGGACCAA CGCCGCGC CAAC GCGCAGCG TAACGACTACCAGCG hflK 4724236 - 4725495 + | modulator for HflB protease specific for phage lambda cII repressor hflC 4725498 - 4726502 + | modulator for HflB protease specific for phage lambda cII repressor TERM 6305 4726559 - 4726531 - f 76 -8.2 -4.19678 | gap 1, opp_overlap 4726532, overlap 4726532 GTACAGGTCAATAAA GCCACC-ACATCC TCAG GGATGTCGGTGGT TTTCTTTTTCTATAA TERM 6306 4726558 - 4726532 - f 81 -11.7 -3.11325 | gap 1, opp_overlap 4726532, overlap 4726531 TACAGGTCAATAAAG CCACC-ACATCC TCAG GGATGTCGGTGG TTTTCTTTTTCTATA TERM 6307 4726532 - 4726558 + F 100 -11.7 -5.38839 | gap 1, opp_overlap 4726532 4726531 TACAGGTCAATAAAG CCACC-ACATCC TCAG GGATGTCGGTGG TTTTCTTTTTCTATA yjeT 4726584 - 4726781 + | conserved hypothetical protein; putative inner membrane protein TERM 6308 4727255 - 4727245 - g 74 -8.2 -3.86194 | overlap 4727232 4727246 AACGCGCGTGAGAAA GCGC GTG GCGC GAAAGCGATCGGCAC TERM 6309 4727400 - 4727368 - g 72 -5.6 -4.56775 | opp_overlap 4727368 4727390, overlap 4727391 ACCTTCGCTGAAAAA CTGAAAGAAGTGAT GGAAT ATCACAACTTCCAG TTGGTTAACTACTAC purA 4726885 - 4728183 + | adenylosuccinate synthetase TERM 6310 4728238 - 4728272 + F 71 -9.4 -3.10975 | gap 1 CAGTGTGATACATTG CTGTGTCGGTTAAGC CATTAC GCT-ATCCGACACAG TGTTAAATCCTCGCT nsrR 4728388 - 4728813 + | DNA-binding transcriptional regulator TERM 6311 4728975 - 4728951 - g 75 -5.7 -4.71482 | gap 1, overlap 4728952 ACCAAACGTGAAAAA CCGGCCAGCC GTGATG AGCTGGC-GG TAGAACTGCACATTG rnr 4728852 - 4731293 + | exoribonuclease R, RNase R TERM 6312 4731340 - 4731282 - f 100 -8.9 -5.4505 | opp_overlap 4731288 4731297, overlap 4731283 4731297 GCGGCGAAGAAAAAA GTGGCAGAGTGATAATTCACCCTCTTC AAACA GAAGAGGGTGAATTATCCGTAGGCCGG GCAAGCGTGGCGCTC TERM 6313 4731339 - 4731283 - f 100 -12.4 -3.86307 | opp_overlap 4731288 4731297, overlap 4731282 4731297 CGGCGAAGAAAAAAG TGGCAGAGTGATAATTCACCCTCTTC AAACA GAAGAGGGTGAATTATCCGTAGGCCG GGCAAGCGTGGCGCT TERM 6314 4731325 - 4731297 - f 100 -16.2 -3.39327 | opp_overlap 4731288 4731297, overlap 4731283 4731282 GTGGCAGAGTGATAA TTCACCCTCTTC AAACA GAAGAGGGTGAA TTATCCGTAGGCCGG TERM 6315 4731297 - 4731325 + F 100 -16.2 -3.35679 | opp_overlap 4731283 4731282 4731297, overlap 4731288 GTGGCAGAGTGATAA TTCACCCTCTTC AAACA GAAGAGGGTGAA TTATCCGTAGGCCGG TERM 6316 4731504 - 4731529 + G 76 -10.5 -3.36492 | gap 1, overlap 4731505 TCTGTTACCGCTGAT TCACGCCCTTGA GTC TCA-GGGCGTGG TTATCCAGTTGGCAA TERM 6317 4731505 - 4731528 + G 73 -11.8 -2.61681 | gap 1, overlap 4731504 CTGTTACCGCTGATT CACGCCCTTGA GTC TCA-GGGCGTG GTTATCCAGTTGGCA TERM 6318 4731599 - 4731569 - g 74 -6 -4.4648 | opp_overlap 4731569 4731576 ATCTCGATGAGAAAA GCGACGGTGCCGTG CAT CAGGGCATTATCGC TCGTGTGAAGCCAGG TERM 6319 4731700 - 4731754 + G 81 -12.9 -2.82623 | opp_overlap 4731699 4731709, overlap 4731708 4731710 GACGGCGTAACCGAT CCGCA-CAACCTCGGCGCGTGTCTGCG TAG CGCGGACGC-CGCTGGTGTTCATGCGG TGATTGTGCCGAAAG TERM 6320 4731708 - 4731745 + G 74 -10.5 -3.17688 | gap 1, opp_overlap 4731699 4731709, overlap 4731700 4731710 AACCGATCCGCACAA CCTCGGCGCGTGTCTGCG TAG CGCGGACGC-CGCTGGTG TTCATGCGGTGATTG TERM 6321 4731710 - 4731743 + G 77 -11.7 -3.1478 | gap 1, opp_overlap 4731709 4731699, overlap 4731708 4731700 CCGATCCGCACAACC TCGGCGCGTGTCTGCG TAG CGCGGACGC-CGCTGG TGTTCATGCGGTGAT rlmB 4731385 - 4732116 + | 23S rRNA (Gm2251)-methyltransferase TERM 6322 4732155 - 4732136 - f 73 -6.4 -4.3534 | opp_overlap 4732137, overlap 4732137 TCTGAATTATGAAAA GCCATCCA GATT TGGATGGT TTTTTTTTGTCTATA TERM 6323 4732154 - 4732137 - f 72 -9.9 -3.20722 | opp_overlap 4732137, overlap 4732136 CTGAATTATGAAAAG CCATCCA GATT TGGATGG TTTTTTTTTGTCTAT TERM 6324 4732137 - 4732154 + F 100 -9.9 -6.32216 | opp_overlap 4732137 4732136 CTGAATTATGAAAAG CCATCCA GATT TGGATGG TTTTTTTTTGTCTAT yjfI 4732243 - 4732644 + | hypothetical protein yjfJ 4732663 - 4733361 + | putative transcriptional regulator effector protein TERM 6325 4733365 - 4733393 + F 75 -8.9 -3.65542 | opp_overlap 4733362, overlap 4733363 4733366 CAGGGCGAGTAATTT TTTGCCAGCCT CACTGCA AGGCTGGCAAC TATTTTAAGGATAAA TERM 6326 4733366 - 4733392 + F 82 -12.4 -2.79004 | opp_overlap 4733362, overlap 4733365 4733363 AGGGCGAGTAATTTT TTGCCAGCCT CACTGCA AGGCTGGCAA CTATTTTAAGGATAA TERM 6327 4733806 - 4733818 + G 74 -3.3 -5.00616 | opp_overlap 4733807, overlap 4733807 AAACTGGCAGGAAAA ACGCT GGC AGCGA TTTTTTAACAGCGAA TERM 6328 4733817 - 4733807 - g 85 -6.8 -4.73388 | opp_overlap 4733806 4733807 AACTGGCAGGAAAAA CGCT GGC AGCG ATTTTTTAACAGCGA TERM 6329 4733899 - 4733887 - g 71 -3.4 -4.74012 | AGTAGAAAATCAAAA CCAT GCTAA ATGG GAAGTGCATAATTTT yjfK 4733411 - 4734070 + | hypothetical protein TERM 6330 4734435 - 4734457 + G 72 -5.5 -4.57341 | gap 1, overlap 4734437 4734448 AGGAATGTTTATGGG AACCGCC-GC GCTG GCTGGCGGTA TTTTTAACGCAGCTT TERM 6331 4734437 - 4734455 + G 72 -8.1 -3.90048 | gap 1, overlap 4734435 4734448 GAATGTTTATGGGAA CCGCC-GC GCTG GCTGGCGG TATTTTTAACGCAGC yjfL 4734088 - 4734486 + | conserved hypothetical protein; putative inner membrane protein TERM 6332 4734630 - 4734641 + G 79 -2.2 -5.27779 | gap 1, overlap 4734621 4734620 AACGTTGGCACTAAT G-GGC GGT GCCGC TTTTTTCGTATTGAA TERM 6333 4735043 - 4735033 - g 80 -5.4 -5.00616 | GGTTCTGGCAAAAAA GAGT CTT ACTC TTCGGGCGGCTTTAC yjfM 4734496 - 4735134 + | hypothetical protein yjfC 4735137 - 4736300 + | putative synthetase/amidase TERM 6334 4736369 - 4736332 - f 95 -14.3 -3.14132 | opp_overlap 4736336 TCTTTCTGTCATGAA TCCATGGCAGTGACCAT ACTA ATGGTGACTGCCATTGA TGGAGGGAGACACAG TERM 6335 4736336 - 4736365 + F 93 -13.7 -3.14132 | opp_overlap 4736332 TCTGTCATGAATCCA TGGCAGTGACCAT ACTA ATGGTGACTGCCA TTGATGGAGGGAGAC TERM 6336 4736730 - 4736742 + G 100 -10.5 -4.68724 | overlap 4736711 CCGGCGCATTTGTGG CGCGC GCG GCGCG TTTTATGTTACATGC TERM 6337 4737064 - 4737094 + G 100 -8.3 -5.24129 | gap 1 CGATGCGCATCTGGT GCTGGCACAGACCG CGGG CGGTTTGT-CCTGC TTTTTTGTGCCGCGC aidB 4736384 - 4738009 + | isovaleryl CoA dehydrogenase yjfN 4738401 - 4738126 - | hypothetical protein TERM 6338 4738370 - 4738412 + g 76 -3.5 -4.98531 | gap 1 GGATAAGTCACTAAT TGCAGC-GAGGGTGAGGCAA GTAA TTGTTTCATCGTCAGCTCCA TTTTTCGTTTCCCCA yjfO 4738879 - 4738550 - | hypothetical protein yjfP 4739061 - 4739810 + | putative hydrolase ulaR 4740562 - 4739807 - | DNA-binding transcriptional dual regulator TERM 6339 4740394 - 4740409 + g 87 -4.6 -5.22039 | overlap 4740395 GTTGGGTAATAGCTT CTGCGC CATT GCGCAC TTTTTTCAGTTTGCC TERM 6340 4740661 - 4740620 - R 88 -11.7 -3.47762 | gap 1, overlap 4740618 4740623 AATAGCCAGGAAATA CTATGCCGGATAGCGC-GAG CAT CTCCACGCTATCCGGTACAA GCGACAGATTACAGG TERM 6341 4740658 - 4740623 - R 86 -13.4 -2.87769 | gap 1, overlap 4740620 4740618 AGCCAGGAAATACTA TGCCGGATAGCGC-GAG CAT CTCCACGCTATCCGGTA CAAGCGACAGATTAC ulaG 4741734 - 4740670 - | putative L-ascorbate 6-phosphate lactonase TERM 6342 4742044 - 4742064 + H 70 -9 -3.24423 | opp_overlap 4742043 TGAGAGCACAACATT CCGGGTGT GCGAA ATACCCGG TTACCTCTTCTTCAG ulaA 4742089 - 4743486 + | L-ascorbate-specific enzyme IIC component of PTS TERM 6343 4743795 - 4743763 - g 71 -9.1 -3.53224 | GATTTTGGCCCGAAA CTGCTGGAAGTGATC AAA GAGCATTTCCCGCAG GACGTGAAGTAAGGA ulaB 4743502 - 4743807 + | L-ascorbate-specific enzyme IIB component of PTS ulaC 4743817 - 4744281 + | L-ascorbate-specific enzyme IIA component of PTS ulaD 4744295 - 4744945 + | 3-keto-L-gulonate 6-phosphate decarboxylase TERM 6344 4745014 - 4744994 - g 100 -12.5 -4.7497 | GGCATCTACGAAAAA GCGCTCCCC GCT GGGGAGTGC TGGCTGGAACGACTG ulaE 4744955 - 4745809 + | L-xylulose 5-phosphate 3-epimerase TERM 6345 4745827 - 4745817 - g 75 -6.8 -4.3208 | overlap 4745818 CGGCATAATGCAAAA GCTG AAA CAGC AGGTGTTTGAGGCCA ulaF 4745809 - 4746495 + | L-ribulose 5-phosphate 4-epimerase TERM 6346 4746583 - 4746566 - T 100 -12.7 -5.40072 | CGTTTTTCAAAAAAA GCCCCCT GCGA AGGGGGC AAAGCAAACTATGGC yjfY 4746899 - 4746624 - | hypothetical protein rpsF 4747227 - 4747622 + | 30S ribosomal subunit protein S6 priB 4747629 - 4747943 + | primosomal protein N rpsR 4747948 - 4748175 + | 30S ribosomal subunit protein S18 rplI 4748217 - 4748666 + | 50S ribosomal subunit protein L9 TERM 6347 4748687 - 4748715 + F 100 -16.1 -3.05597 | opp_overlap 4748692, overlap 4748692 TATTCAACGAGACGT AAAAACGCCGACC AGT GGTCGGCGTTTTG CTTTTAAGCGATAAA TERM 6348 4748692 - 4748710 + F 100 -16 -4.67038 | opp_overlap 4748692, overlap 4748687 AACGAGACGTAAAAA CGCCGACC AGT GGTCGGCG TTTTGCTTTTAAGCG TERM 6349 4748710 - 4748692 - f 100 -16 -4.72333 | opp_overlap 4748692 4748687 AACGAGACGTAAAAA CGCCGACC AGT GGTCGGCG TTTTGCTTTTAAGCG TERM 6350 4749047 - 4749027 - f 81 -11.3 -3.15197 | CAATAAATGCTAATA TTATGGCTA TCA TAGCCATAA AAAGATAAAATATTA TERM 6351 4749064 - 4749051 - f 74 -3.9 -4.89852 | TCATAGCCATAAAAA GATAA AATA TTATC ACTATGGGTAAAAAA ECS88_4790 4749068 - 4749559 + | hypothetical protein ECS88_4791 4749562 - 4750830 + | hypothetical protein TERM 6352 4750962 - 4750928 - T 100 -11 -4.92783 | opp_overlap 4750930 4750934 4750943 AATTTATGAGAAAAA TAGAAACGCTACAA AGCTAAA TTATAGCGTTTCTA TGTAAAATAATTAGC ECS88_4792 4752250 - 4750973 - | putative Hexuronate transporter TERM 6353 4753004 - 4752978 - R 81 -6.4 -4.89233 | opp_overlap 4752996, overlap 4752971 4752979 4752994 GACGAACAGCAAAAA CCTGCCCGGCAT TCA ATGCCGCGCCGC CAGGTCGGGTGACGC TERM 6354 4753003 - 4752979 - R 75 -9.9 -3.52455 | opp_overlap 4752996, overlap 4752971 4752978 4752994 ACGAACAGCAAAAAC CTGCCCGGCAT TCA ATGCCGCGCCG CCAGGTCGGGTGACG TERM 6355 4754338 - 4754359 + r 71 -8.7 -3.54424 | opp_overlap 4754331 CGTGACAACCCATGC GGGTTCTGC CTGT GCAAAACCC TTTGGGAAAGTAACG ECS88_4795 4755953 - 4754412 - | putative CoA transferase TERM 6356 4755601 - 4755584 - G 77 -6.9 -4.58283 | CAACGTGGGTAAAAA GTCCCGG ACGT CCGGCAC CGATCTCCCGCAGCA ECS88_4796 4756745 - 4755963 - | putative acyl-CoA hydratase TERM 6357 4756627 - 4756645 + g 72 -6 -4.34737 | opp_overlap 4756627 ATTTCATTTAAATAA TGGTCGAG AGA TTCGATCA TTTCTTCATTAATAG ECS88_4797 4757591 - 4756749 - | putative enzyme ECS88_4798 4758434 - 4757601 - | putative dehydrogenase ytfA 4758581 - 4759252 + | putative transcriptional regulator ytfB 4759874 - 4759236 - | putative cell envelope opacity-associated protein TERM 6358 4759315 - 4759345 + g 76 -7.4 -4.17089 | opp_overlap 4759307, overlap 4759316 4759325 GTATCAATGGTTAAG CCCGTCACCACGCC GCT GGCGTTCTGGCGGA TTTTCACCATTTGCC TERM 6359 4759316 - 4759344 + g 72 -10.9 -3.09772 | opp_overlap 4759307, overlap 4759315 4759325 TATCAATGGTTAAGC CCGTCACCACGCC GCT GGCGTTCTGGCGG ATTTTCACCATTTGC fklB 4760093 - 4760713 + | FKBP-type peptidyl-prolyl cis-trans isomerase (rotamase) cycA 4761022 - 4762434 + | D-alanine/D-serine/glycine transporter TERM 6360 4762447 - 4762471 + T 100 -16.5 -4.30014 | opp_overlap 4762435 TAACCGCATTATCAT GCTGGATGGCG CAA TGCCATCCAGC TTTTAGATTACTCAC ytfE 4763141 - 4762479 - | regulator of cell morphogenesis and cell wall metabolism ytfF 4764223 - 4763249 - | conserved hypothetical protein; putative inner membrane protein ytfG 4765183 - 4764323 - | NAD(P)H:quinone oxidoreductase ytfH 4765272 - 4765652 + | putative transcriptional regulator TERM 6361 4765716 - 4765743 + T 85 -12 -3.35467 | opp_overlap 4765704 4765706, overlap 4765710 4765717 TAAGATGCGCCAGCA TCGCATCCGACA AAAG TGCCGGATGCGG TTGATGATTTATAGG TERM 6362 4765717 - 4765742 + T 84 -13.3 -2.60798 | opp_overlap 4765706, overlap 4765716 4765710 AAGATGCGCCAGCAT CGCATCCGACA AAAG TGCCGGATGCG GTTGATGATTTATAG cpdB 4767718 - 4765775 - | 2':3'-cyclic-nucleotide 2'-phosphodiesterase TERM 6363 4766429 - 4766440 + g 70 -3.6 -4.59773 | GGCGGCATTACGGAA GGTC AACT GGCC TTTTTCCACCTCCAC TERM 6364 4767092 - 4767037 - G 75 -11.8 -2.88663 | opp_overlap 4767079 ACGGATCGGCAGATA GCCCGGAATGCGCCAGAACGACAACG ACAT CGGCACCTTTCTCGCGCATTTCAGGC ACGTATTTGCGCACG cysQ 4767908 - 4768648 + | PAPS (adenosine 3'-phosphate 5'-phosphosulfate) 3'(2'),5'-bisphosphate nucleotidase ytfJ 4769195 - 4768638 - | putative transcriptional regulator ytfK 4769520 - 4769726 + | hypothetical protein TERM 6365 4769744 - 4769777 + T 70 -7.5 -3.89614 | gap 1, opp_overlap 4769749 4769751, overlap 4769746 4769751 AAAGTGCTATGCAGT AATAAGACGGCTCCTG ATT CAGGAGCCGT-TGATG TTTCTGGGGGTTACG TERM 6366 4769746 - 4769775 + T 77 -10.1 -3.5362 | gap 1, opp_overlap 4769749 4769751, overlap 4769744 4769751 AGTGCTATGCAGTAA TAAGACGGCTCCTG ATT CAGGAGCCGT-TGA TGTTTCTGGGGGTTA TERM 6367 4769773 - 4769749 - T 100 -14.3 -3.73647 | opp_overlap 4769746 4769744 4769751, overlap 4769751 GCTATGCAGTAATAA GACGGCTCCTG ATT CAGGAGCCGTT GATGTTTCTGGGGGT TERM 6368 4769751 - 4769771 + T 100 -16.9 -3.50335 | opp_overlap 4769749 4769751, overlap 4769746 4769744 TATGCAGTAATAAGA CGGCTCCTG ATT CAGGAGCCG TTGATGTTTCTGGGG TERM 6369 4769771 - 4769751 - T 100 -16.9 -3.44998 | opp_overlap 4769751 4769746 4769744, overlap 4769749 TATGCAGTAATAAGA CGGCTCCTG ATT CAGGAGCCG TTGATGTTTCTGGGG ytfL 4771131 - 4769788 - | conserved hypothetical protein; putative inner membrane protein msrA 4772092 - 4771454 - | methionine sulfoxide reductase A TERM 6370 4772223 - 4772236 + H 71 -2.4 -5.06816 | TAGTCTGCTTTTTAA TCCA TATTAC TGGA TTTTTGTTAAGCCGT TERM 6371 4773685 - 4773697 + G 79 -4.7 -5.00616 | ATTTCGACAAAGTAC CGCCG GAT CTGCG TTTTTTCGCCGGGGG ytfM 4772298 - 4774031 + | conserved hypothetical protein; putative outer membrane protein and surface antigen TERM 6372 4774638 - 4774627 - g 72 -5.8 -4.43272 | ACCGAAAATTGAAAA TCCG CAGC CGGA GGAAAAGCCGCTCGG TERM 6373 4776162 - 4776123 - g 79 -2.1 -5.22794 | gap 1, overlap 4776124 4776126 ATAAGGAGCAAAAAA TCAGCAT-CGGGCCACAC TGCTG GCTTAACCCGAATGCGGA ACTGTGCGTGCCGCA TERM 6374 4777757 - 4777778 + G 70 -10.9 -2.70315 | overlap 4777755 4777754 CTATATCTGGAAGCC GTGTCTGGT GTAG ACCAGGCAC TGGATTTGCTCTATC ytfN 4774028 - 4777807 + | hypothetical protein TERM 6375 4777887 - 4777873 - g 72 -11.4 -2.52834 | opp_overlap 4777872 4777871, overlap 4777849 4777854 4777872 CACTGGATGACCAAT GCCCAG TTA CTGGGC GATTTCAGTATCGAT ytfP 4777810 - 4778151 + | hypothetical protein TERM 6376 4778188 - 4778155 - T 85 -11.1 -3.81414 | opp_overlap 4778161 4778163, overlap 4778160 4778163 AGGGGTAAGTAATAA TAAAAGCACGCCACC TTCG GGTGGCGTTGTTTTA TGCGATGTATCTCGC TERM 6377 4778183 - 4778160 - T 82 -6.6 -4.95167 | opp_overlap 4778161 4778163, overlap 4778155 4778163 TAAGTAATAATAAAA GCACGCCACC TTCG GGTGGCGTTG TTTTATGCGATGTAT TERM 6378 4778161 - 4778183 + T 86 -9.9 -4.4195 | gap 1, opp_overlap 4778160 4778155 4778163, overlap 4778163 AAGTAATAATAAAAG CA-CGCCACC TTCG GGTGGCGTTG TTTTATGCGATGTAT TERM 6379 4778180 - 4778163 - T 90 -12.7 -3.32865 | opp_overlap 4778163 4778161, overlap 4778160 4778155 GTAATAATAAAAGCA CGCCACC TTCG GGTGGCG TTGTTTTATGCGATG TERM 6380 4778163 - 4778180 + T 100 -12.7 -4.32067 | opp_overlap 4778160 4778155 4778163, overlap 4778161 GTAATAATAAAAGCA CGCCACC TTCG GGTGGCG TTGTTTTATGCGATG ppa 4779061 - 4778531 - | inorganic pyrophosphatase TERM 6381 4779559 - 4779543 - g 70 -7.3 -4.12902 | GAATTACGCTGAAAA TTGCCGA TGG TCAGCAA AAGCAGGAAAACCAG ytfQ 4779371 - 4780327 + | putative sugar transporter subunit: periplasmic-binding component of ABC superfamily TERM 6382 4781529 - 4781503 - g 70 -5.1 -4.43213 | gap 1, overlap 4781504 CGGAAGACAGGAAAA CCGATGGCATCA TCGC TGCCGCC-TCGG TGCGGGAAAATATCA ytfR 4780467 - 4781969 + | putative sugar transporter subunit: ATP-binding component of ABC superfamily ytfT 4781983 - 4783005 + | putative sugar transporter subunit: membrane component of ABC superfamily TERM 6383 4783286 - 4783300 + G 72 -7.8 -3.92143 | overlap 4783240 GTGCTGGTGATGGGC TGTGCC TTC GGCGCA TTTATGGGGCTTTTG yjfF 4782992 - 4783987 + | putative sugar transporter subunit: membrane component of ABC superfamily TERM 6384 4784012 - 4783991 - T 100 -15.9 -4.87665 | GCGCAGCGATAAAAA CGCCTCTCC GTGT GGAGAGGCG CAGGAGATTACGCGT fbp 4785018 - 4784020 - | fructose-1,6-bisphosphatase I TERM 6385 4784963 - 4784986 + g 81 -9.6 -4.09864 | GCAGTGAGCTCACCG GTAGCATGAG AAAA CTCGTGCTGC TTTTCGACAATAAAT mpl 4785194 - 4786567 + | UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase TERM 6386 4786597 - 4786628 + T 78 -10 -3.58343 | opp_overlap 4786607, overlap 4786598 4786614 4786615 GATATAGTGTGCGTA GGCCGGATAAGGCG TTCA CGCCGCATCCGGCA TTTGAGCATAGTGCC TERM 6387 4786598 - 4786627 + T 86 -13.5 -2.74792 | opp_overlap 4786607, overlap 4786597 4786614 4786615 ATATAGTGTGCGTAG GCCGGATAAGGCG TTCA CGCCGCATCCGGC ATTTGAGCATAGTGC TERM 6388 4786615 - 4786653 + T 74 -11 -2.53255 | opp_overlap 4786607 4786639, overlap 4786598 4786597 4786614 4786650 CGGATAAGGCGTTCA CGCCGCATCCGGCATT TGAGCAT AGTGCCTGATGCGACG CTTGATGCGTCTTAT yjgA 4787274 - 4786723 - | hypothetical protein pmbA 4787368 - 4788720 + | peptidase required for the maturation and secretion of the antibiotic peptide MccB17 TERM 6389 4788746 - 4788725 - f 71 -2.1 -5.14563 | overlap 4788726 CCGGGCAGTAAAAAA CTGGCGCGA CCTG CCGCGCTAT AAACTAAAAAATTAC TERM 6390 4789039 - 4789026 - g 75 -5.2 -4.58685 | overlap 4789028 AAAGTGGTCGAAAAA GCCG ATAACG CGGC GCAAGTCAAAGACGC cybC 4788903 - 4789289 + | soluble cytochrome b562 TERM 6391 4789297 - 4789330 + T 100 -14.7 -3.4072 | overlap 4789298 ATCGTTAATTCCTCA TTTCCCTGTTGCCTG CACT CAGGTAACAGGGAAC TTATCATCGCAAATG TERM 6392 4789298 - 4789329 + T 100 -18.2 -2.64218 | overlap 4789297 TCGTTAATTCCTCAT TTCCCTGTTGCCTG CACT CAGGTAACAGGGAA CTTATCATCGCAAAT nrdG 4789798 - 4789334 - | anaerobic ribonucleotide reductase activating protein TERM 6393 4789881 - 4789848 - R 74 -9.5 -3.34344 | opp_overlap 4789853 4789868, overlap 4789849 GCATCCGGTAATCAA TGCCTGATGCGACGC TGTC GCGTCTTATCAGGCC TGGAGCAGTTGCCAA TERM 6394 4789880 - 4789849 - R 84 -13 -2.60392 | opp_overlap 4789853 4789868, overlap 4789848 CATCCGGTAATCAAT GCCTGATGCGACGC TGTC GCGTCTTATCAGGC CTGGAGCAGTTGCCA TERM 6395 4789853 - 4789871 + r 80 -11 -3.30124 | opp_overlap 4789849 4789848, overlap 4789868 CGGTAATCAATGCCT GATGCGAC GCT GTCGCGTC TTATCAGGCCTGGAG TERM 6396 4789933 - 4789902 - R 79 -12.2 -2.64472 | opp_overlap 4789868 4789902 4789903, overlap 4789898 4789912 CAGTTGCCAAATGTA GGCCGGATAAGGCG TTTA CGCCGCATCCGGCA TTTGCTTAACGTAGA TERM 6397 4789902 - 4789933 + r 82 -10 -3.91911 | opp_overlap 4789902 4789898 4789912, overlap 4789868 4789903 CAGTTGCCAAATGTA GGCCGGATAAGGCG TTTA CGCCGCATCCGGCA TTTGCTTAACGTAGA TERM 6398 4789903 - 4789932 + r 87 -13.5 -2.94825 | opp_overlap 4789902 4789898 4789912, overlap 4789868 4789902 AGTTGCCAAATGTAG GCCGGATAAGGCG TTTA CGCCGCATCCGGC ATTTGCTTAACGTAG nrdD 4792094 - 4789956 - | anaerobic ribonucleoside-triphosphate reductase TERM 6399 4791785 - 4791812 + g 77 -6.2 -4.67234 | gap 1, opp_overlap 4791784 4791787, overlap 4791787 TCTGCTCGACCAGAC CACGGATCTCCTG GTT CAGGCGA-CCGCG TTTTTCACGTTCAAT TERM 6400 4792307 - 4792317 + r 72 -5.4 -4.57275 | overlap 4792302 ATATATAGTGCTTTG CATC AAG GATG TTTTAACTTTTTTTG TERM 6401 4792475 - 4792450 - R 91 -9.8 -4.60797 | gap 1 TGCTGACAGACAAAA CCCCGG-AATG ACCGG CATTACCGGGG CTTAGGGGAGATTTA treC 4794143 - 4792488 - | trehalose-6-P hydrolase TERM 6402 4792599 - 4792613 + g 75 -11.4 -3.1247 | GTTGCCGCGCATTTG CCCTGG CTG CCAGGG TTGGATCTCACGGCT treB 4795614 - 4794193 - | fused trehalose(maltose)-specific PTS enzyme: IIB component ; IIC component TERM 6403 4795053 - 4795067 + g 91 -5.6 -5.41143 | opp_overlap 4795041 4795046 4795050 4795053, overlap 4795055 GCACGATACCAAGGA TCGGCG TGC CGCCCA TTTTTTTCACCGCTG TERM 6404 4795693 - 4795680 - R 87 -8.1 -4.92239 | GGAAAAATTTAAAAA CGGGA ACGT TCCCG AAACGCAGCGAAGAT treR 4796680 - 4795733 - | DNA-binding transcriptional repressor TERM 6405 4797392 - 4797408 + G 70 -5.1 -4.41348 | ATTCTCGGCGCTATT TCTTACG CCA CGGAAGA TTTATTTGCCGCGGG mgtA 4797059 - 4799755 + | magnesium transporter TERM 6406 4799929 - 4799948 + T 83 -10.7 -3.65827 | opp_overlap 4799929 TGTCATCAGACTTAA TCCGGGC ATGATA GCCCGGA TTTCCATCAAGATTA TERM 6407 4799948 - 4799929 - T 78 -10.7 -3.14468 | opp_overlap 4799929 TGTCATCAGACTTAA TCCGGGC ATGATA GCCCGGA TTTCCATCAAGATTA yjgF 4800347 - 4799961 - | ketoacid-binding protein TERM 6408 4800376 - 4800401 + r 91 -10.5 -4.63218 | opp_overlap 4800376 TTACAGCGGTAAAAA GTCTGGCTC ATTATAGG GAGCCAGAC TTTTATTACCAACCG TERM 6409 4800401 - 4800376 - R 91 -10.5 -4.61231 | opp_overlap 4800376 TTACAGCGGTAAAAA GTCTGGCTC ATTATAGG GAGCCAGAC TTTTATTACCAACCG pyrI 4800881 - 4800420 - | aspartate carbamoyltransferase, regulatory subunit pyrB 4801829 - 4800894 - | aspartate carbamoyltransferase, catalytic subunit pyrL 4801967 - 4801833 - | pyrBI operon leader peptide TERM 6410 4801878 - 4801861 - G 100 -12.7 -5.75342 | CCTGGGCAAAAAAAA GCCCCTC GATT GAGGGGC TGGGAATGGGTGATC TERM 6411 4802136 - 4802150 + r 76 -2.8 -5.18355 | TCGGTATCAATAATT GCAG ACATTCC CTGC TTTTTCCTTTTTCAC yjgH 4802643 - 4802248 - | putative mRNA endoribonuclease TERM 6412 4802754 - 4802729 - R 91 -8.3 -4.93877 | opp_overlap 4802728 4802729 CGTGAGTAAACAAAA CCCAGACATCA TGGA TAATGGCTGGG CTTAATTGAGCGTAG yjgI 4803487 - 4802774 - | putative oxidoreductase with NAD(P)-binding Rossmann-fold domain yjgJ 4803558 - 4804151 + | putative transcriptional regulator yjgK 4804296 - 4804748 + | hypothetical protein ECS88_4840 4804871 - 4806454 + | conserved hypothetical protein; length varies in various strains; absent from some TERM 6413 4806579 - 4806610 + T 82 -10.3 -3.88787 | gap 1, opp_overlap 4806578 4806577 TACATAAAATAATGT GATGCCGGGATAGT TTTGT ATT-TCCCGGCATC TTTATAGCGATATCA argI 4807631 - 4806627 - | ornithine carbamoyltransferase 1 yjgD 4807793 - 4808209 + | hypothetical protein TERM 6414 4808249 - 4808224 - T 86 -9.7 -4.31379 | opp_overlap 4808224 ATTAATTGATTAAAA TGCCCGATAGC ACAC ACTAGCGGGCA TTTTTTTAGAGTTCG TERM 6415 4808224 - 4808249 + T 100 -9 -5.47399 | opp_overlap 4808224 ATTAATTGATTAAAA TGCCCGATAG CACACA CTAGCGGGCA TTTTTTTAGAGTTCG yjgM 4808758 - 4808255 - | putative acetyltransferase TERM 6416 4810105 - 4810094 - g 70 -5.8 -4.17263 | opp_overlap 4810093 GAACAACCAGATAAA GGCT TCTT AGCC AGTATTTCACGGGGA yjgN 4808951 - 4810147 + | conserved hypothetical protein; putative inner membrane protein TERM 6417 4810155 - 4810182 + T 84 -9.8 -4.26344 | opp_overlap 4810159, overlap 4810159 TTCTGTAAGAGATAA AAAAGGCCGGAG CATT CTCCGGCCTTCG TTTTCATCACGGTGT TERM 6418 4810178 - 4810159 - T 100 -15 -5.47431 | opp_overlap 4810159 4810155 GTAAGAGATAAAAAA GGCCGGAG CATT CTCCGGCC TTCGTTTTCATCACG TERM 6419 4810159 - 4810178 + T 100 -15 -3.71672 | opp_overlap 4810159, overlap 4810155 GTAAGAGATAAAAAA GGCCGGAG CATT CTCCGGCC TTCGTTTTCATCACG valS 4813056 - 4810201 - | valyl-tRNA synthetase TERM 6420 4811561 - 4811581 + g 74 -7.5 -4.07568 | overlap 4811563 ACGCTGGTTGGGTGG AACTGACGC AGG GCGTCGGTG TTTTCCGGCCAGCCA TERM 6421 4811563 - 4811579 + g 77 -10.1 -3.63744 | overlap 4811561 GCTGGTTGGGTGGAA CTGACGC AGG GCGTCGG TGTTTTCCGGCCAGC TERM 6422 4812825 - 4812841 + g 72 -4.3 -4.62783 | overlap 4812828 CGGCGTGGTCAGTAC CGACCTG CCA CAGGGTG TTTTTGCCCTGCATG holC 4813499 - 4813056 - | DNA polymerase III, chi subunit TERM 6423 4813220 - 4813238 + g 70 -4.5 -4.56597 | gap 1, opp_overlap 4813220 GACTAATCAATATAT CGC-GCGG GCTG CTGCTGCG TTTTTGCGGCCAGGC TERM 6424 4813669 - 4813716 + r 70 -9.3 -3.14931 | gap 1, opp_overlap 4813648 4813645 4813714, overlap 4813656 4813659 4813694 GATGCGACGCTGCCG CGTCTTATCAGGCCTACG-AGT TCGGT GCTGTGTAGGTCGGATAAGGCG TTCATGCCGCATCCG pepA 4815364 - 4813853 - | aminopeptidase A, a cyteinylglycinase TERM 6425 4813902 - 4813927 + g 70 -4.5 -4.54727 | opp_overlap 4813904, overlap 4813903 4813904 AGGAACTGTGCCAGC AACGCTACCGG ACGA CCGGTTGCGCC TTTTGCTTTACCAGA TERM 6426 4813925 - 4813904 - G 77 -11.5 -3.14881 | opp_overlap 4813904 4813903 4813902 GAACTGTGCCAGCAA CGCTACCGG ACGA CCGGTTGCG CCTTTTGCTTTACCA TERM 6427 4813904 - 4813925 + g 73 -11.5 -2.5893 | opp_overlap 4813904, overlap 4813903 4813902 GAACTGTGCCAGCAA CGCTACCGG ACGA CCGGTTGCG CCTTTTGCTTTACCA TERM 6428 4816521 - 4816552 + G 75 -4.4 -4.73613 | gap 1, overlap 4816524 TCAGGGACGCGTACT GTCGATGCTGCCAGC CAT GCTG-CTGTATCTAC TTTTCTTCCTGATCC yjgP 4815631 - 4816731 + | conserved hypothetical protein; putative inner membrane protein yjgQ 4816731 - 4817813 + | conserved hypothetical protein; putative inner membrane protein TERM 6429 4817841 - 4817818 - T 80 -11 -3.40141 | opp_overlap 4817822 4817826, overlap 4817822 4817826 GAAAATCGTAACCAA GCAAGGGAGC GAAA GCTCCCTTTC ACATTGTTGATAAAG TERM 6430 4817837 - 4817822 - T 77 -10.4 -3.45634 | opp_overlap 4817822 4817826, overlap 4817818 4817826 ATCGTAACCAAGCAA GGGAGC GAAA GCTCCC TTTCACATTGTTGAT TERM 6431 4817822 - 4817837 + T 80 -10.4 -3.72453 | opp_overlap 4817822 4817818 4817826, overlap 4817826 ATCGTAACCAAGCAA GGGAGC GAAA GCTCCC TTTCACATTGTTGAT yjgR 4819434 - 4817932 - | putative ATPase TERM 6432 4819558 - 4819534 - R 70 -9.2 -3.21872 | TCCAAAGAGATTTAA GTGCCGGGCG ACAGG CACCCGGCAA AGGGATCAGAAGTCG yjgB 4820583 - 4819564 - | putative alcohol dehydrogenase, Zn-dependent and NAD(P)-binding ECS88_4852 4820864 - 4820658 - | hypothetical protein ECS88_4853 4821397 - 4822221 + | Conserved hypothetical protein, putative phage-related protein ECS88_4854 4822896 - 4822270 - | putative lysogenic conversion protein from Bacteriophage P2-EC53 insI 4824364 - 4823213 - | IS30 transposase; KpLE2 phage-like element ECS88_4855 4822907 - 4823293 + | transposase ORF A, IS3 family TERM 6433 4824345 - 4824328 - Gf 81 -7 -4.64766 | opp_overlap 4824330 TCCATAGTTCAAAAA CAGAGG CTTTTT CCTCTG CTGTAAATGTTCGTC TERM 6434 4824574 - 4824554 - g 72 -4.6 -4.65838 | CAGATACTGGAAAAA CCGTCCTG AAAAA CCAGACGG CAGACGGGCTGTATT TERM 6435 4824926 - 4824915 - g 77 -5.8 -4.63218 | opp_overlap 4824920 CTGTTCGCAAGAAAA CCAG TGGG CTGG GCCATGTCGTTCTCG insO 4824495 - 4825094 + | transposase ORF B (fragment), IS911 TERM 6436 4825276 - 4825261 - g 76 -9 -3.71552 | ACCGCACGAATATAA TGGTGG GTTA CCACCA AACGAATCAGAAAAC yjhV 4825260 - 4825673 + | conserved hypothetical protein; KpLE2 phage-like element TERM 6437 4825864 - 4825886 + T 87 -6.2 -5.21709 | overlap 4825865 ACCAGCTCCGTGAAT GTCCGCTCTG GCA CAGAGCGAAA TTTTTTGATCTCCCC TERM 6438 4825865 - 4825885 + T 79 -9.7 -3.72302 | overlap 4825864 CCAGCTCCGTGAATG TCCGCTCTG GCA CAGAGCGAA ATTTTTTGATCTCCC TERM 6439 4826168 - 4826150 - T 72 -7.4 -4.10657 | opp_overlap 4826161 TCAGAGTCCGGAAAA GTTCAGCC CCA GTCTGAAC AGGCTTGCTGGCGCC fecE 4826998 - 4826231 - | iron-dicitrate transporter subunit ; ATP-binding component of ABC superfamily; KpLE2 phage-like element fecD 4828465 - 4826999 - | iron-dicitrate transporter subunit ; membrane component of ABC superfamily fecC 4828950 - 4827952 - | iron-dicitrate transporter subunit ; membrane component of ABC superfamily; KpLE2 phage-like element TERM 6440 4828929 - 4828899 - GR 95 -11.8 -4.22309 | overlap 4828896 AGAAAATAATAATAA GTGCTGCAACGGGA AGC CCCCACAGCAGCAC CGGGTGTTTTATCGC fecB 4829849 - 4828947 - | iron-dicitrate transporter subunit ; periplasmic-binding component of ABC superfamily; KpLE2 phage-like element TERM 6441 4829724 - 4829743 + g 86 -6.4 -5.07567 | overlap 4829726 GAACGAGAGTTCCAG CACCACAA TCCG TTGTGGCG TTTTTTCGAGTGTAA TERM 6442 4829884 - 4829869 - R 95 -11.8 -4.19258 | ACATTCCAGCTAAAA GCCCGG CAAG CCGGGC GTTAACACATCAGAA fecA 4832218 - 4829894 - | ferric citrate outer membrane transporter; KpLE2 phage-like element fecR 4833258 - 4832305 - | transmembrane signal transducer for ferric citrate transport; KpLE2 phage-like element fecI 4833776 - 4833255 - | RNA polymerase, sigma 19 factor; KpLE2 phage-like element insA 4834068 - 4834346 + | IS1 repressor protein InsA; KpLE2 phage-like element TERM 6443 4836728 - 4836714 - g 85 -11.4 -3.57144 | CTGTTCACCGGTAAA CAGGGC GAT GCCCTG ACATTCGCAACCATT TERM 6444 4836804 - 4836788 - g 70 -3.7 -4.6856 | GAAAGAGGGGAAAAA CGAAACT AAA ATTTTCG TTACGCCAGATTTCG TERM 6445 4837356 - 4837324 - g 70 -4.1 -4.66833 | gap 1 CGGCAAGCGGAAAAA CCGCGATGTACGGT TATCCT ATCG-ACAGCGCGG CCTACAGCAAAAACA TERM 6446 4837380 - 4837370 - g 71 -3.2 -4.8048 | GGCCTACAGCAAAAA CAGC GAC GCTA AAATCGGAGACATCG ECS88_4873 4836504 - 4837877 + | conserved hypothetical protein; putative exported protein ECS88_4877 4839908 - 4839561 - | conserved hypothetical protein, putative transposase ORF2, IS66 family ECS88_4878 4840306 - 4839905 - | conserved hypothetical protein, putative transposase, IS3 family TERM 6447 4840317 - 4840327 + r 70 -6.8 -4.14541 | overlap 4840315 4840320 CCCACTACTTATTTG GTGG ACA CCAC TTTGTCTAATTCGTC TERM 6448 4840657 - 4840637 - R 73 -10.5 -3.05384 | opp_overlap 4840636 4840637 CTGCTCCGGAGGCAA CCATTACAG CCT CTGTAACGG ATTATCAGCCCTGGC ECS88_4879 4841161 - 4840640 - | hypothetical protein ECS88_4880 4841469 - 4841062 - | hypothetical protein ECS88_4881 4842328 - 4841723 - | hypothetical protein TERM 6449 4841749 - 4841767 + g 74 -8.8 -3.87318 | TACAGCCAAAATTGC GCTCACCG GTG CAGTGAGC TTTGGTATGCTCCTT TERM 6450 4842321 - 4842301 - G 70 -10.5 -2.74263 | overlap 4842300 AGGTCATGGTTAAAT CTCCGTATG GTT CATACGGAA TAGCCACGTCGTAAA TERM 6451 4842469 - 4842459 - R 71 -2.4 -5.15969 | TTTTAATGTAAAAAA CCGG TTA CGGG TAAGGCTGTGAGGAG ECS88_4883 4843033 - 4842869 - | hypothetical protein ECS88_4884 4843213 - 4843037 - | putative transcriptional regulator ECS88_4885 4843780 - 4843514 - | hypothetical protein ECS88_4886 4843726 - 4844127 + | hypothetical protein TERM 6452 4844176 - 4844196 + FH 73 -8.9 -3.49475 | opp_overlap 4844165, overlap 4844165 4844174 4844178 GTAATCCCCGGCCTG CCGGCGGCA TTC TGCTGCCTG TTATATCCCCGTGAG TERM 6453 4844178 - 4844194 + FH 76 -10.1 -3.32202 | opp_overlap 4844165, overlap 4844165 4844174 4844176 AATCCCCGGCCTGCC GGCGGCA TTC TGCTGCC TGTTATATCCCCGTG ECS88_4887 4844207 - 4844824 + | hypothetical protein ECS88_4888 4844996 - 4845193 + | hypothetical protein TERM 6454 4846182 - 4846170 - f 100 -3.4 -6.02914 | overlap 4846174 4846179 CTTACATAAAAAAAA CAGA GAAAA TCTG AACATCACACTTTCA ECS88_4889 4846228 - 4846941 + | hypothetical protein TERM 6455 4846969 - 4846996 + G 95 -9.1 -5.06052 | gap 1 ATTATCTCCGTGAGT CCCCCAC-CACC TTTCC GGTGTGCGGGGG TTTTGTCTTTTTTCA ECS88_4890 4846963 - 4847898 + | conserved hypothetical protein with GTPase domain TERM 6456 4848040 - 4848016 - f 91 -8.7 -4.91285 | opp_overlap 4848016 4848034 4848035, overlap 4848031 ATTAATAGAATAAAA CGATCGATA AAACAGG TATCGATCG TTGCTATCGATCGTT TERM 6457 4848035 - 4848053 + F 72 -7.4 -4.02424 | opp_overlap 4848016 4848031, overlap 4848016 4848034 CGATAAAACAGGTAT CGATCGTT GCT ATCGATCG TTTATAGTGGTTAAT TERM 6458 4848211 - 4848238 + G 100 -17.8 -5.45652 | TGCTGTTTTGTACCT GCCGGTATCCAC TTTT GTGGGTACCGGC TTTTTTATTCACCCT TERM 6459 4848600 - 4848587 - g 82 -8.1 -4.57474 | GCAATGGATACAAAA TGGCG GTAT CGCCA ACAACACTACTGTCA TERM 6460 4849419 - 4849399 - g 74 -10.5 -3.17075 | CCGGTGGTAAGGCAA CAGATGTCA CCA TGACATCCG GTAGTGCCCTGATTG ECS88_4891 4848195 - 4851116 + | antigen 43 precursor (AG43) (Fluffing protein) TERM 6461 4851139 - 4851161 + F 100 -19.2 -4.98531 | GTCACTCTCCTTCAG GCCCCGGTCA TCA TGACCGGGGC TTTTTACTTTCAGGG ECS88_4892 4851151 - 4851345 + | hypothetical protein TERM 6462 4851424 - 4851449 + F 100 -13.3 -5.09521 | CATTTCATCTGTCAG GCCGCGTCTTC TCCG GGAGACGTGGC TTTTTCATTTATTAC TERM 6463 4851503 - 4851516 + GF 77 -6.7 -4.48987 | AAGGAGCAAATTATG CGACT AGCC AGTCG TTTTGGTTATGCGAA ECS88_4893 4851500 - 4852318 + | hypothetical protein TERM 6464 4852362 - 4852391 + GF 100 -16.5 -3.34455 | gap 1, opp_overlap 4852360 4852357, overlap 4852357 GGCACCAGAATCACC CGACGCCCCGG-AG GCG CTGCCGGGGTGTCG TTCCATTTCTGATGA TERM 6465 4852471 - 4852454 - gf 75 -8.5 -3.85817 | opp_overlap 4852432 ACCGTCCCGGAGAAA TCAGTCT GTGC AGACTGA GTATACAGGCAATGG ECS88_4894 4852279 - 4853133 + | conserved hypothetical protein; putative antirestriction protein yeeS 4853179 - 4853625 + | putative DNA repair protein; CP4-44 prophage TERM 6466 4853736 - 4853746 + G 88 -2.4 -5.55698 | ATTCACCGTCAGCAT CCGG CAT CCCG TTTTTTTCCGTTCTG yeeT 4853688 - 4853909 + | conserved hypothetical protein; CP4-44 prophage ECS88_4897 4853909 - 4854022 + | hypothetical protein TERM 6467 4854073 - 4854098 + T 76 -5.5 -4.75776 | gap 1, overlap 4854063 4854062 AACATCGATGGAGAT CGGTTCGTGTCA CTT TCACA-GAACCG TTTTTAAATTACCTT ECS88_4898 4854862 - 4854113 - | putative transposase ORF2, IS21 family ECS88_4899 4856415 - 4854874 - | putative transposase ORF1, IS21 family yeeU 4856658 - 4857026 + | antitoxin of the YeeV-YeeU toxin-antitoxin system; CP4-44 prophage TERM 6468 4857555 - 4857575 + F 81 -11.9 -3.04263 | AGACTCACCTCTGTT GCTCCATCA TGA TGATGGGGC TGTTGGCCCTCGAAT TERM 6469 4857667 - 4857656 - f 73 -4.4 -4.80729 | AAAGACAATAGAAAA GTAC ATAT GTAC AAAAAGTGTGATTTA mtnK 4857954 - 4859213 + | Methylthioribose kinase (MTR kinase) mtnA 4859223 - 4860338 + | methyl-thioribose-1-phosphate isomerase TERM 6470 4860420 - 4860397 - g 91 -5.4 -5.31877 | AGTTAGCAGAAAAAA TCATTTCC ACTTGTCG GGAAATGA ATGCGTCAGGTCTTA mtnB 4860369 - 4861010 + | methyl-thioribulose-1-phosphate dehydratase TERM 6471 4861065 - 4861039 - f 76 -10.2 -3.31329 | opp_overlap 4861039 4861041 4861044, overlap 4861035 4861037 4861042 4861044 TTAATTAATAACATA TGACAGCCATTC GCA GAATGGCTGCTA TTCCCTCTGTCCACA TERM 6472 4861039 - 4861065 + F 74 -10.2 -3.15999 | opp_overlap 4861039 4861035 4861037 4861042 4861044, overlap 4861041 4861044 TTAATTAATAACATA TGACAGCCATTC GCA GAATGGCTGCTA TTCCCTCTGTCCACA TERM 6473 4861041 - 4861063 + F 78 -10.6 -3.14125 | opp_overlap 4861039 4861035 4861037 4861042 4861044, overlap 4861039 4861044 AATTAATAACATATG ACAGCCATTC GCA GAATGGCTGC TATTCCCTCTGTCCA TERM 6474 4861062 - 4861042 - f 87 -14.1 -2.81625 | opp_overlap 4861041 4861039 4861044, overlap 4861039 4861035 4861037 4861044 ATTAATAACATATGA CAGCCATTC GCA GAATGGCTG CTATTCCCTCTGTCC TERM 6475 4861060 - 4861044 - f 75 -10.9 -2.94704 | opp_overlap 4861041 4861039 4861044, overlap 4861042 4861039 4861035 4861037 TAATAACATATGACA GCCATTC GCA GAATGGC TGCTATTCCCTCTGT TERM 6476 4861044 - 4861060 + F 74 -10.9 -2.77232 | opp_overlap 4861044 4861042 4861039 4861035 4861037, overlap 4861041 4861039 TAATAACATATGACA GCCATTC GCA GAATGGC TGCTATTCCCTCTGT TERM 6477 4861823 - 4861813 - g 77 -3.2 -5.14563 | CTGGTCATGAAAAAA CCTA TTT CAGG AGAACCGGTCAACGG ECS88_4904 4861114 - 4862118 + | putative integral membrane protein; putative sugar permease TERM 6478 4862148 - 4862121 - T 80 -6.2 -4.78572 | opp_overlap 4862123, overlap 4862122 4862123 CGCTAATCAATAAAA TCCTGCCCCATA TCTA CATGGGGCAGTT GTTCATTCTTTTAGT TERM 6479 4862147 - 4862122 - T 75 -9.7 -3.4642 | opp_overlap 4862123, overlap 4862121 4862123 GCTAATCAATAAAAT CCTGCCCCATA TCTA CATGGGGCAGT TGTTCATTCTTTTAG TERM 6480 4862146 - 4862123 - T 84 -13.2 -2.67129 | opp_overlap 4862123, overlap 4862122 4862121 CTAATCAATAAAATC CTGCCCCATA TCTA CATGGGGCAG TTGTTCATTCTTTTA TERM 6481 4862123 - 4862146 + T 100 -12.5 -3.95647 | opp_overlap 4862123 4862122 4862121 CTAATCAATAAAATC CTGCCCCAT ATCTAC ATGGGGCAG TTGTTCATTCTTTTA yjhU 4863145 - 4862159 - | putative DNA-binding transcriptional regulator; KpLE2 phage-like element ECS88_4906 4863436 - 4863245 - | hypothetical protein TERM 6482 4863305 - 4863341 + g 100 -22.6 -3.15544 | opp_overlap 4863314, overlap 4863314 CCCGCTGTTCCCCCA TACTGTAAAGCCGGAG ACATG CTCCGGCTTTACAGTA TTACTGAGAATACAC TERM 6483 4863314 - 4863332 + g 85 -11.7 -3.67517 | opp_overlap 4863314, overlap 4863305 CCCCCATACTGTAAA GCCGGAG ACATG CTCCGGC TTTACAGTATTACTG TERM 6484 4863332 - 4863314 - G 85 -11.7 -3.63627 | opp_overlap 4863314 4863305 CCCCCATACTGTAAA GCCGGAG ACATG CTCCGGC TTTACAGTATTACTG yjhF 4864841 - 4863492 - | putative transporter; KpLE2 phage-like element TERM 6485 4863535 - 4863524 - G 87 -4.4 -5.22006 | overlap 4863528 CGAGCAGAATAAAAA TCAG CCCA CTGA TGGATAAGAGTGTGG yjhG 4866915 - 4864948 - | putative dehydratase; KpLE2 phage-like element TERM 6486 4866294 - 4866280 - G 77 -10 -3.58726 | opp_overlap 4866284 GTCCTGTAGAGATAA TTCGCC ATT GGCGAA GCGTGCGCCAATGGT TERM 6487 4866284 - 4866308 + g 93 -12.9 -3.60971 | opp_overlap 4866280, overlap 4866300 TGTAGAGATAATTCG CCATTGGCGAA GCG TGCGCCAATGG TTTGCACCTTGCCGT yjhH 4867831 - 4866926 - | putative lyase/synthase (dapA-like); KpLE2 phage-like element yjhI 4868624 - 4867836 - | putative DNA-binding transcriptional regulator; KpLE2 phage-like element sgcR 4869709 - 4868927 - | putative DNA-binding transcriptional regulator; KpLE2 phage-like element sgcE 4870358 - 4869726 - | putative epimerase; KpLE2 phage-like element TERM 6488 4869813 - 4869841 + g 73 -11.7 -2.71731 | ATGTTGCGCCCCAGC TGCTGCCAGTTGC TGT GCAGCTGCCAGCG TAATTCCACCGTCGG sgcA 4870801 - 4870370 - | putative phosphotransferase enzyme IIA component; KpLE2 phage-like element TERM 6489 4870901 - 4870931 + r 76 -10.4 -3.32819 | overlap 4870903 4870904 GGGTTATTGCTCTTT GCCGGGGATAAGCG CTC TGCTTATCCCCATC TTATCGGCGTATATG TERM 6490 4870903 - 4870929 + r 81 -11.6 -3.22951 | overlap 4870901 4870904 GTTATTGCTCTTTGC CGGGGATAAGCG CTC TGCTTATCCCCA TCTTATCGGCGTATA TERM 6491 4870904 - 4870928 + r 89 -15.1 -2.53449 | overlap 4870903 4870901 TTATTGCTCTTTGCC GGGGATAAGCG CTC TGCTTATCCCC ATCTTATCGGCGTAT sgcQ 4871738 - 4870932 - | putative nucleoside triphosphatase; KpLE2 phage-like element TERM 6492 4871102 - 4871116 + g 78 -7.8 -4.42464 | opp_overlap 4871099 4871102 TGTTGGCCAACACGA CGGTGT CAG GCACCG TTTCTTTGACCCGTT sgcC 4873064 - 4871751 - | putative phosphotransferase enzyme IIC component; KpLE2 phage-like element TERM 6493 4872070 - 4872060 - G 72 -6.8 -4.2028 | CATACAGATAAAGAA CGGT GCT ACCG GCAGGTCTGCGAGGG TERM 6494 4872459 - 4872475 + g 90 -6.6 -5.1675 | AGCATCGATATTGCG TCCCTT CATGA AAGGGA TTTTTTCATAGATAG sgcB 4873354 - 4873076 - | putative enzyme IIB component of PTS; KpLE2 phage-like element sgcX 4874472 - 4873351 - | putative endoglucanase with Zn-dependent exopeptidase domain; KpLE2 phage-like element yjhP 4876004 - 4875258 - | putative methyltransferase; KpLE2 phage-like element yjhQ 4876605 - 4876060 - | putative acetyltransferase; KpLE2 phage-like element yjhX 4876874 - 4876617 - | conserved hypothetical protein; KpLE2 phage-like element TERM 6495 4877209 - 4877222 + r 79 -6.7 -4.67982 | overlap 4877199 CGGCTTTTCCCTTCG GGAGA TTAT TCTCC TTTTGTTAAATCCAG ECS88_4923 4877496 - 4877365 - | hypothetical protein TERM 6496 4877588 - 4877611 + H 73 -10.2 -3.10975 | opp_overlap 4877589 ACTGCCCACGATTAA AGGTGGCCGC TCAG GCGGTCACCG TATTCGATAATAAAT TERM 6497 4877610 - 4877589 - H 91 -11.5 -3.78775 | opp_overlap 4877588 CTGCCCACGATTAAA GGTGGCCGC TCAG GCGGTCACC GTATTCGATAATAAA yjhR 4877836 - 4878852 + | putative frameshift suppressor; KpLE2 phage-like element TERM 6498 4879279 - 4879289 + T 71 -4.6 -4.63542 | AATAACAACGGTTTA TGCG GTG CGCG TTTTTCACCCTTGTG yjhS 4880415 - 4879435 - | hypothetical protein TERM 6499 4880472 - 4880453 - R 79 -12.1 -2.69246 | opp_overlap 4880446 4880445, overlap 4880448 4880445 GACAAATTGATAGCA GGGCCCC TTTACC GGGGCCC TGAAGCGTTAGTTTT yjhT 4881586 - 4880480 - | hypothetical protein TERM 6500 4880709 - 4880723 + g 70 -5 -4.4648 | TCATGCGCATAGTTC TTACCG TTC TGGTAA TTTTCTCGTGAACCT yjhA 4882322 - 4881606 - | N-acetylnuraminic acid outer membrane channel protein ECS88_4929 4883516 - 4883121 - | hypothetical protein TERM 6501 4883740 - 4883717 - H 75 -4.6 -4.94902 | overlap 4883738 TAATCAGGATAAAAA TGTTGGATTA TTGC TAACCCAGCA CAGCTAGTGCGCGTC TERM 6502 4884070 - 4884096 + G 95 -9.4 -4.85599 | AGTATCCGTACTTCG TACCCGCATGCT GAG AGCGAGTGGGTA TTTTTATCGCGTAAG fimB 4883776 - 4884378 + | tyrosine recombinase/inversion of on/off regulator of fimA TERM 6503 4884358 - 4884370 + F 85 -9.1 -4.3898 | opp_overlap 4884355 AGAGCCAGAGGACGA CAGCG TCA CGCTG TTTTATAGAGATAGT TERM 6504 4884690 - 4884705 + F 91 -6.2 -5.38839 | opp_overlap 4884685 AATGAAAATAGATGT TATCAC ATCA GTGATA TTTTATTTTTGTATG TERM 6505 4884740 - 4884769 + F 100 -10.9 -5.10064 | gap 1 TTAATGTAATTGACT GATAGCCACATCAC TTC GTG-TGTGGTTATC TTTTTATCTATTGGG fimE 4884855 - 4885451 + | tyrosine recombinase/inversion of on/off regulator of fimA TERM 6506 4886130 - 4886164 + G 72 -6.6 -4.19506 | gap 2, opp_overlap 4886140 4886149 4886150, overlap 4886115 4886150 GTTCGTACCGCTAGT CTGA-AGCAGA-CTGG AGCAA CCAGCTCTGCTGTCGG TTTTAACATTCAGCT fimA 4885932 - 4886486 + | major type 1 subunit fimbrin (pilin) fimI 4886551 - 4887090 + | fimbrial protein involved in type 1 pilus biosynthesis TERM 6507 4887295 - 4887283 - g 77 -6.3 -4.62069 | CCGGCAGGGCAAAAA CAAGT GCA ACTTG CCGTGACAAATAATG TERM 6508 4887438 - 4887418 - g 88 -2.6 -5.54192 | opp_overlap 4887420, overlap 4887420 ATGAAGGGAAAAAAA GAGAATAC CTTAC GTATTCTT GATGCAACAAATAAC TERM 6509 4887436 - 4887420 - g 70 -5.2 -4.40173 | opp_overlap 4887420, overlap 4887418 GAAGGGAAAAAAAGA GAATAC CTTAC GTATTC TTGATGCAACAAATA fimC 4887127 - 4887852 + | chaperone, periplasmic fimD 4887919 - 4890555 + | outer membrane usher protein, type 1 fimbrial synthesis TERM 6510 4890628 - 4890657 + G 82 -12.9 -2.87931 | GTAAGTCACGCTTTG GCTGCGGATAGCA CGAT TACTATCCGCGGC TATGTCAGAGATAAC fimF 4890565 - 4891095 + | minor component of type 1 fimbriae fimG 4891108 - 4891611 + | minor component of type 1 fimbriae TERM 6511 4891737 - 4891707 - g 70 -6.9 -4.07885 | gap 1, opp_overlap 4891729 4891731 CATTCGCCTGTAAAA CCGCCAAT-GGCAC CGCT ATCCCTATTGGCGG TGGCAGCGCCAATGT TERM 6512 4891729 - 4891751 + G 70 -7 -4.0492 | opp_overlap 4891707, overlap 4891731 TGGCACCGCTATCCC TATTGGCGGT GGC AGCGCCAATG TTTATGTAAACCTTG fimH 4891631 - 4892533 + | minor component of type 1 fimbriae TERM 6513 4892670 - 4892701 + T 77 -9.4 -3.6692 | gap 1, opp_overlap 4892667 4892675 4892677, overlap 4892668 4892672 CTTTACCGACAATCC G-AACAGAGCCTGCC AAT GGCAGGCTCAGGTGC TCTTTTACGCTACCA TERM 6514 4892672 - 4892698 + T 80 -12.2 -2.94337 | opp_overlap 4892667 4892675 4892677, overlap 4892670 4892668 TTACCGACAATCCGA ACAGAGCCTGCC AAT GGCAGGCTCAGG TGCTCTTTTACGCTA TERM 6515 4892695 - 4892675 - T 100 -16.9 -3.11291 | opp_overlap 4892672 4892670 4892668, overlap 4892667 4892677 CCGACAATCCGAACA GAGCCTGCC AAT GGCAGGCTC AGGTGCTCTTTTACG TERM 6516 4892693 - 4892677 - T 87 -13.7 -3.11326 | opp_overlap 4892672 4892670 4892668, overlap 4892675 4892667 GACAATCCGAACAGA GCCTGCC AAT GGCAGGC TCAGGTGCTCTTTTA gntP 4894049 - 4892706 - | fructuronate transporter TERM 6517 4895448 - 4895418 - g 70 -6.9 -4.0098 | gap 1 GCGGAAGGCAAAGAA GACC-TGATCCCGA TGCG TCCGGACCACGGTC ATCAGATGCTGGACG uxuA 4894389 - 4895573 + | mannonate hydrolase TERM 6518 4895580 - 4895604 + F 100 -15 -3.58329 | opp_overlap 4895576, overlap 4895576 AGCCGTTAATATCCA CCGGCATGGC TGCGC GCCGTGCCGG TTCCTTCTTCCTTGC TERM 6519 4895887 - 4895876 - g 86 -5.8 -5.15117 | GAAAACCTGAAAAAA CAGC AACT GCTG TACACCGTGGCGGAA TERM 6520 4895920 - 4895906 - g 70 -4.9 -4.56775 | overlap 4895907 ACCGTGGCGGAAAAA GGCGC GGAAA GCACC GAGCTGAAAATTATC uxuB 4895654 - 4897114 + | D-mannonate oxidoreductase, NAD-binding TERM 6521 4897139 - 4897170 + F 100 -12.5 -4.94243 | TACCCTACAGACTTA CTGGTCAATCAAA CTGATA TTTGGTTGACCAG TTTTCGTTTTTTTGC uxuR 4897329 - 4898102 + | DNA-binding transcriptional repressor TERM 6522 4898140 - 4898116 - T 71 -8.6 -3.44527 | opp_overlap 4898116 4898124 4898129 4898131 4898132, overlap 4898129 4898131 4898132 GACTTATTATGATAA GCGCAAGG GTAAACATT CCTTGCGC TTTCTTAAATTAAGA TERM 6523 4898116 - 4898140 + T 82 -9.3 -4.2528 | opp_overlap 4898116 4898129 4898131 4898132, overlap 4898124 4898129 4898131 4898132 GACTTATTATGATAA GCGCAAGGG TAAACAT TCCTTGCGC TTTCTTAAATTAAGA yjiC 4899073 - 4898243 - | hypothetical protein TERM 6524 4899354 - 4899368 + H 70 -5.8 -4.40333 | GTATTTTTGATGTAT TTGATA TGT TATCAA TTTATATTATTTACA ECS88_4944 4899636 - 4899779 + | hypothetical protein yjiD 4899745 - 4900137 + | DNA replication/recombination/repair protein yjiE 4901041 - 4900130 - | putative DNA-binding transcriptional regulator iadA 4902278 - 4901106 - | isoaspartyl dipeptidase TERM 6525 4902112 - 4902091 - G 75 -5.1 -4.71426 | gap 1, overlap 4902092 4902093 TGTTGATCAATAAAA CCTGGGCAGA GGA TCTGCCC-GC TGAGATCGACAACCG yjiG 4902752 - 4902291 - | conserved hypothetical protein; putative inner membrane protein TERM 6526 4902465 - 4902449 - G 70 -6.5 -4.25104 | opp_overlap 4902448 TCGCGGGCAGTAAAA CGGTGAC ATC GTGACCG GTTAATGCGCCAGCG TERM 6527 4902704 - 4902729 + g 70 -4.7 -4.57569 | opp_overlap 4902693 4902697 4902694 TAAAGCCACGGCGCG CGCCATCGATA AACA TATCCATGACG TTTTTGCGGACCTGA yjiH 4903432 - 4902749 - | conserved hypothetical protein; putative inner membrane protein TERM 6528 4903435 - 4903446 + H 93 -3 -5.90231 | opp_overlap 4903435 CTTGTTGTGTCATAA CAAT CCCC ATTG TTTTTTTGTGTTTGT kptA 4903682 - 4904266 + | 2'-phosphotransferase TERM 6529 4904346 - 4904369 + T 78 -11.1 -3.17212 | opp_overlap 4904346 GTTATCAGTCTGAAA GGATACCCT CGCACA AGGGTATCC TTAATAACCTACTAA TERM 6530 4904369 - 4904346 - T 89 -11.8 -3.58343 | opp_overlap 4904346 GTTATCAGTCTGAAA GGATACCCTC GCAC AAGGGTATCC TTAATAACCTACTAA ECS88_4952 4909627 - 4904387 - | putative invasin/intimin protein TERM 6531 4908710 - 4908694 - G 73 -11.5 -2.71712 | opp_overlap 4908694, overlap 4908693 CTTCCGCGCGTAAAT CCCAGCC GTT GGCCGGG CGGGCTTCGTAGTCA TERM 6532 4908873 - 4908860 - G 76 -3.8 -5.00616 | GTCGTGGTCAAAAAA CAGG TTGATG CCTG ACATCCAGCTGGGGG yjiJ 4911016 - 4909838 - | conserved hypothetical protein; putative inner membrane protein TERM 6533 4910716 - 4910705 - G 86 -3.6 -5.4588 | opp_overlap 4910713 4910714, overlap 4910706 4910707 GAAAACCAGAAAAAA CGGC GGTA GCCA CGCCATCGCGAGGAT yjiK 4911962 - 4911087 - | hypothetical protein TERM 6534 4912052 - 4912035 - R 81 -9.8 -4.02719 | opp_overlap 4912035 4912034 4912031 CGATGAAATAGTAAA CGCCGC AGGGGG GCGGCG GTTGTCTCTGGATGG TERM 6535 4912131 - 4912101 - R 72 -10.5 -2.954 | overlap 4912100 CATCGACTGATAAAT GCGCCTCATCCAT GAATG ATAGATGAGGCGG TTAGCAATTTATATC ECS88_4955 4914276 - 4912183 - | hypothetical protein TERM 6536 4912724 - 4912738 + g 74 -2.9 -5.00895 | opp_overlap 4912724, overlap 4912718 CTAATATTAGTAAGA TCTTT GTCTG AAAGA TTTTTCTCTGATAGA TERM 6537 4912811 - 4912800 - G 79 -4.4 -4.9138 | ATGACGGAAAGAAAA TCAC TTTT GTGA AATCTATGTGTGCAA TERM 6538 4914121 - 4914147 + g 74 -2.4 -5.06585 | opp_overlap 4914116 4914125, overlap 4914116 4914125 4914129 AATCAAACCATCATT CAAATGATTTAT ATC ATAATTAATTTG TTTTTGTATGGTTTC TERM 6539 4914336 - 4914368 + r 82 -12.3 -2.70932 | opp_overlap 4914340 4914345, overlap 4914340 ATCAGGGGGTGTGGG TAAAGATAAGCTTCA CAC TGAAACTTATCTTTA TCATTACCACACCCG TERM 6540 4914340 - 4914364 + r 78 -8.7 -4.05446 | opp_overlap 4914340 4914345, overlap 4914336 GGGGGTGTGGGTAAA GATAAGCTTCA CAC TGAAACTTATC TTTATCATTACCACA TERM 6541 4914364 - 4914340 - R 81 -10.9 -3.53012 | opp_overlap 4914340 4914336, overlap 4914345 GGGGGTGTGGGTAAA GATAAGCTTCA CAC TGAAACTTATC TTTATCATTACCACA ECS88_4956 4914726 - 4914472 - | hypothetical protein ECS88_4957 4914854 - 4914588 - | hypothetical protein hgdC 4915618 - 4914851 - | ATPase, activator of (R)-hydroxyglutaryl-CoA dehydratase TERM 6542 4915556 - 4915539 - G 84 -10.5 -3.84246 | GTTGGAACGAGGAAA CGGCGCG TAAT CACGCCG TCTGCCAGTAAGATC yjiM 4916779 - 4915628 - | putative 2-hydroxyglutaryl-CoA dehydratase (hgdB-like) TERM 6543 4916244 - 4916258 + g 72 -5.6 -4.57073 | overlap 4916245 TAAAAATTAGCCAGT GCGCGA CGT TCGCGG TTTTTCAGCGCAATG TERM 6544 4916428 - 4916439 + g 82 -3 -5.27023 | GCTTAAACTCCGCCA TGTA TTCA TACA TTTTCTTTTTGCCGT TERM 6545 4916831 - 4916847 + r 71 -5.1 -4.55209 | GAGGCCACATTATTA CCATTCT TTT AGTATGG TTTATTTGATCTCTC yjiN 4918175 - 4916895 - | conserved hypothetical protein; putative inner membrane protein TERM 6546 4918150 - 4918133 - G 80 -11.3 -3.32233 | opp_overlap 4918131, overlap 4918131 4918129 TAAGCAGTAAAGAGA GCGCCAA CATT TTGGCGC GTCTGAGTTCAATGA yjiO 4919448 - 4918216 - | multidrug efflux system protein TERM 6547 4919587 - 4919566 - H 75 -10.9 -2.97166 | overlap 4919561 ATGTAATCAACCACA CTGCCTGTG AACA CACAGACAG AGAAATACCTTCTGA TERM 6548 4919619 - 4919593 - H 76 -8.1 -4.20086 | opp_overlap 4919597 ACACAGACAGAGAAA TACCTTCTGAC TCCAG GTCAGAATGTA TAACGATTACAAATA ECS88_4962 4919915 - 4920859 + | Conserved hypothetical protein, putative transposase yjiR 4922514 - 4921102 - | fused putative DNA-binding transcriptional regulator ; putative aminotransferase yjiS 4922691 - 4922855 + | hypothetical protein yjiW 4923292 - 4922897 - | hypothetical protein TERM 6549 4923405 - 4923453 + r 73 -9.2 -3.54741 | gap 2, opp_overlap 4923403 4923416 4923417, overlap 4923417 GAAGAGAAATTAACG TTAATTCAGAATGGCCGGATAACA AAG TGT-ATCCGGCC-TTCATAATTAA TTTAAAGCACTCATA TERM 6550 4923443 - 4923416 - R 73 -9.2 -3.42621 | gap 1, opp_overlap 4923405 4923417, overlap 4923403 4923417 AACGTTAATTCAGAA TGGCCGGATAACA AAG TGT-ATCCGGCCT TCATAATTAATTTAA TERM 6551 4923417 - 4923442 + r 90 -12.7 -3.31625 | gap 1, opp_overlap 4923416 4923403 4923417, overlap 4923405 ACGTTAATTCAGAAT GGCCGGATAACA AAG TGT-ATCCGGCC TTCATAATTAATTTA TERM 6552 4923442 - 4923417 - R 81 -12.7 -2.65091 | gap 1, opp_overlap 4923417 4923405, overlap 4923416 4923403 ACGTTAATTCAGAAT GGCCGGATAACA AAG TGT-ATCCGGCC TTCATAATTAATTTA ECS88_4966 4926725 - 4923450 - | type I restriction-modification system (hsdR-like) TERM 6553 4925861 - 4925883 + g 75 -4.9 -4.7373 | opp_overlap 4925879 TTACTTCGTGCTTGG CTTTATCCG GGAAG CAGATAAAG TTTTTAATCACATCC TERM 6554 4926153 - 4926163 + g 78 -8.2 -4.27316 | overlap 4926152 ATTGGCTTCCTGCTC GCGC ACC GCGC TTTTAAATTCAAAGA TERM 6555 4926799 - 4926780 - R 86 -10.7 -3.98236 | AAACCTTACCAGAAA GCCCCTG ATTTTA CAGGGGC AAAATGCGTTATGCA ECS88_4967 4928199 - 4926808 - | type I restriction-modification system (hsdS-like) ECS88_4968 4929808 - 4928189 - | putative type I restriction-modification system methyltransferase subunit; (hsdM-like) TERM 6556 4929614 - 4929633 + g 82 -2 -5.41143 | opp_overlap 4929615, overlap 4929615 4929617 CATCTCAAGGAAGTC AGCTTGCC CATC GGCAATCA TTTTTTTGCGGCGTG ECS88_4970 4931038 - 4930418 - | hypothetical protein TERM 6557 4931222 - 4931191 - H 71 -9 -3.38291 | overlap 4931194 GCTATAATTGCAGAA TAATTGTAGATACA TTTT TGTATATACAATTA GGGATGGCAACTATG ECS88_4971 4931208 - 4931522 + | hypothetical protein ECS88_4972 4931368 - 4931811 + | hypothetical protein TERM 6558 4931837 - 4931812 - T 73 -4.5 -4.84921 | overlap 4931813 4931816 CAGAACAAAAAATAA TTCAGGCCGCC ACAT GGCGGCCATCA TCCATCATCCAAAAT TERM 6559 4931833 - 4931816 - T 89 -14.1 -2.84096 | overlap 4931812 4931813 ACAAAAAATAATTCA GGCCGCC ACAT GGCGGCC ATCATCCATCATCCA yjiA 4932808 - 4931852 - | putative GTPase yjiX 4933022 - 4932819 - | hypothetical protein TERM 6560 4933062 - 4933045 - R 100 -14.1 -4.51812 | TCTGATAAGAACAAA GCCCCGC CGAA GCGGGGC TAAACACGGTTAGTG yjiY 4935222 - 4933072 - | conserved hypothetical protein; putative inner membrane protein TERM 6561 4935427 - 4935458 + H 71 -9 -3.41454 | opp_overlap 4935433, overlap 4935429 4935433 4935457 CGTCGTTTAAGTGAC GATAAATATGTGAT TCAT ATCACATATTTATA TTGTGAATAATTTAT TERM 6562 4935429 - 4935456 + H 81 -11.6 -3.27012 | opp_overlap 4935433, overlap 4935427 4935433 TCGTTTAAGTGACGA TAAATATGTGAT TCAT ATCACATATTTA TATTGTGAATAATTT TERM 6563 4935433 - 4935452 + H 76 -8 -4.28188 | opp_overlap 4935433, overlap 4935429 4935427 TTAAGTGACGATAAA TATGTGAT TCAT ATCACATA TTTATATTGTGAATA TERM 6564 4935452 - 4935433 - H 72 -8 -3.99405 | opp_overlap 4935433 4935429 4935427 TTAAGTGACGATAAA TATGTGAT TCAT ATCACATA TTTATATTGTGAATA TERM 6565 4935625 - 4935639 + G 72 -7.1 -4.20883 | GTATCAAAATTGTGA CCAGC TTACT GCTGG TTTTGGCCGTTTTTG TERM 6566 4935950 - 4935911 - g 91 -5.6 -5.42862 | gap 1, opp_overlap 4935945, overlap 4935927 4935928 ACAGGCGGAAAAAAA CTG-GGCGGATTACGAAGC GTT GCCGCGTGACCCGCGTCAG AGCACCGCCGCAGCG TERM 6567 4936699 - 4936681 - g 70 -5.2 -4.37886 | opp_overlap 4936682, overlap 4936682 CCAGTTCGCAGAAAA TCGCCGAT ATT ATCAGCGT AATTGACGGCATTGC tsr 4935600 - 4937255 + | methyl-accepting chemotaxis protein I, serine sensor receptor TERM 6568 4937295 - 4937268 - T 95 -12.2 -4.2679 | gap 1, overlap 4937248 TAATCGCCATGAAAA TGCCCGATAAGCA AAA TG-TTATCGGGCA TAAGGAGATTAATCT yjiZ 4938665 - 4937304 - | putative transporter yjjM 4939794 - 4938880 - | putative DNA-binding transcriptional regulator TERM 6569 4939521 - 4939531 + g 70 -4 -4.69656 | TGAAAAAAGCCTGCT CAAA CAC TTTG TTTTGTTCACTCATT yjjN 4939933 - 4940955 + | putative oxidoreductase, Zn-dependent and NAD(P)-binding TERM 6570 4940983 - 4941009 + T 100 -5.8 -6.32017 | opp_overlap 4940974 ATTAAAGTTGCCATG CAGCGTCCGG GGAAGTG TTGGGCGCTG TTTTTTTTGTTTCTT TERM 6571 4941083 - 4941049 - T 100 -15.8 -3.33261 | TTGTAAGCCGTAGAA GGCGTGTAGGTCGCAC CCT ATGCGACCTACACATC AGTCAGGAATTACCC mdoB 4943384 - 4941093 - | phosphoglycerol transferase I TERM 6572 4942380 - 4942366 - G 75 -5.7 -4.62984 | GTACGAGAGATAAAA CCATC CGGGT GATGG GTATCGACTGTCAGG yjjA 4944132 - 4943638 - | hypothetical protein dnaC 4944918 - 4944181 - | DNA biosynthesis protein TERM 6573 4944789 - 4944816 + g 77 -7 -4.56597 | gap 1, overlap 4944796 GATTTTCACGTTCGA GAGCGGCGGAGCG GAT CGCTCC-TTGTTC TTTTTGCCAGGCCAG TERM 6574 4944796 - 4944810 + g 95 -11.4 -4.31587 | overlap 4944789 ACGTTCGAGAGCGGC GGAGCG GAT CGCTCC TTGTTCTTTTTGCCA dnaT 4945460 - 4944921 - | DNA biosynthesis protein (primosomal protein I) TERM 6575 4945017 - 4945031 + g 77 -2.7 -5.07486 | GGCACGACCGATTTG CAGGC TGCGC GCCAG TTTTTGTTGCCACTG TERM 6576 4945550 - 4945515 - R 91 -13.4 -3.26947 | opp_overlap 4945517 4945519 4945549 TAACTTTTATAGTAA CACACGGAGGAGAG GAGGCTGT CTCTCATCCGTGTG CTTAAGCGAGGCAAT TERM 6577 4945517 - 4945548 + r 74 -10.9 -2.70932 | opp_overlap 4945515, overlap 4945519 ACTTTTATAGTAACA CACGGAGGAGAGG AGGCTG TCTCTCATCCGTG TGCTTAAGCGAGGCA ECS88_4984 4946055 - 4945567 - | hypothetical protein yjjP 4946801 - 4946031 - | conserved hypothetical protein; putative inner membrane protein TERM 6578 4946761 - 4946751 - G 70 -5.4 -4.43397 | TTGCAAAAGAAATAA TCCA CAC TGGA TACAAAGCCGTGTTA TERM 6579 4946780 - 4946768 - G 81 -9.1 -4.05747 | opp_overlap 4946765 CACACTGGATACAAA GCCGT GTT ACGGC TCGCTGTTGCTCAGT TERM 6580 4948007 - 4947989 - g 86 -3.9 -5.41143 | gap 1 CAGCGCCCAAAAAAA CAGTGCGA TGCG TCG-ACTG GCAATTCACAGCAAC yjjQ 4947420 - 4948145 + | putative DNA-binding transcriptional regulator bglJ 4948157 - 4948780 + | DNA-binding transcriptional activator fhuF 4949606 - 4948818 - | ferric iron reductase involved in ferric hydroximate transport ECS88_4990 4949636 - 4949983 + | hypothetical protein rsmC 4951643 - 4950612 - | 16S RNA m2G1207 methylase TERM 6581 4952002 - 4951972 - gH 87 -4.7 -5.26316 | gap 1, overlap 4951974 TGACGCCAGAAAAAA TCGCGATG-CTGCC GCAA GGCAGTCACTGCAA CAGTTGGCGGTTGGG holD 4951746 - 4952159 + | DNA polymerase III, psi subunit rimI 4952128 - 4952574 + | acetylase for 30S ribosomal subunit protein S18 TERM 6582 4952874 - 4952889 + G 70 -6.8 -4.1347 | gap 1, opp_overlap 4952867 GCGGAAATCTGCACG CCGCTGC CGG GC-GCGG TTTCTCTGCTTAACG yjjG 4952589 - 4953266 + | dUMP phosphatase TERM 6583 4953322 - 4953336 + F 70 -9.2 -3.14132 | opp_overlap 4953320 4953321 TCGTTTTCAACAAGC GCGGCG CGA TGCCGC TTACTCAAGAAGAAA TERM 6584 4953375 - 4953408 + F 80 -8.9 -4.06419 | gap 1, opp_overlap 4953383, overlap 4953383 ACGTTGTCTCCTTAT TTGCAAGAG-GTGGCG AAG CGCCGCACTTTTGCCA TTATTTCTCACCCCA ECS88_4996 4953652 - 4954866 + | putative integrase TERM 6585 4954933 - 4954943 + T 72 -5.4 -4.54047 | overlap 4954922 TTGAGCTGCGGACAT TGCT AGC AGCA TTTTCTGTGAGGTAA ECS88_4997 4956258 - 4955242 - | hypothetical protein ECS88_4998 4957425 - 4956805 - | hypothetical protein from phage origin yfdS 4957787 - 4957425 - | conserved hypothetical protein; CPS-53 (KpLE1) prophage yfdR 4958314 - 4957778 - | conserved hypothetical protein; CPS-53 (KpLE1) prophage TERM 6586 4958232 - 4958257 + g 72 -4.8 -4.60949 | gap 1, opp_overlap 4958231, overlap 4958233 TTTGAAAGGGAAACC G-CGATATCGT TAATC ACGATGTCGTC TTTATTTATCCTGTC TERM 6587 4958233 - 4958255 + g 74 -8.5 -3.90309 | opp_overlap 4958231, overlap 4958232 TTGAAAGGGAAACCG CGATATCGT TAATC ACGATGTCG TCTTTATTTATCCTG TERM 6588 4958426 - 4958411 - R 82 -10.4 -3.86346 | opp_overlap 4958411 TTACGTTTCCATAAA TGCCCC CGCA GGGGCA TTTGCAGTAATGAAA TERM 6589 4958411 - 4958426 + r 78 -10.4 -3.62096 | opp_overlap 4958411 TTACGTTTCCATAAA TGCCCC CGCA GGGGCA TTTGCAGTAATGAAA yfdQ 4959266 - 4958442 - | conserved hypothetical protein; CPS-53 (KpLE1) prophage ECS88_5002 4959880 - 4959332 - | hypothetical protein TERM 6590 4959769 - 4959759 - G 70 -6.8 -4.02733 | CAAAACAGAGAAGAA CACC TGC GGTG GTAGCCGCCCGGATG TERM 6591 4959877 - 4959839 - G 72 -7.4 -3.90048 | opp_overlap 4959874 4959876, overlap 4959837 TGTTTTGTAAAAAGA GCGGTACCAGCCGGAA GCAAGTG TACAAACTGGTACCGC CAAAGCAGTGGCTGT TERM 6592 4960380 - 4960395 + r 71 -10.4 -2.77899 | opp_overlap 4960380, overlap 4960377 AATGGGTAATGAAAA GCCACC TTCG GGTGGC TAATTGATGAGGAGG TERM 6593 4960395 - 4960380 - R 87 -10.4 -4.41895 | opp_overlap 4960377 4960380 AATGGGTAATGAAAA GCCACC TTCG GGTGGC TAATTGATGAGGAGG ECS88_5003 4961109 - 4960417 - | putative transcriptional regulator from phage origin TERM 6594 4961068 - 4961082 + g 74 -10 -3.52668 | GGCGATTTTCATGTT CTTCGC CTG GCGAAG TTGTCTGACTCGGTT ECS88_5004 4961207 - 4961467 + | conserved hypothetical protein from phage origin TERM 6595 4961772 - 4961759 - g 76 -8.1 -4.15061 | overlap 4961747 GAACGCAGATATAAA CCAGC GCCT GCTGG AAGTCATCGAACAGA TERM 6596 4961941 - 4961923 - g 72 -6.1 -4.3739 | CACTGGTCTACAAAA TTTTCTG CGCTC CAGAAAA GAGTGACGCCCGCGA ymfL 4961460 - 4962011 + | putative nucleic acid-binding protein; e14 prophage TERM 6597 4962424 - 4962437 + G 100 -5.9 -5.74122 | opp_overlap 4962416 4962424, overlap 4962416 CACCAAAGCGCACAA CCGCG CTCT TGCGG TTTTTTTGTGTCATG TERM 6598 4963018 - 4963028 + G 70 -6.8 -4.06505 | AATTCATCAGGTCTG GCTG CAG CAGC TTTATCCTATGTTGG ECS88_5007 4962008 - 4963159 + | Conserved Hypothetical protein from phage origin TERM 6599 4963379 - 4963353 - g 76 -3.6 -5.00616 | overlap 4963359 TTGCTCCGGAAAAAA CATGAAGCATCT CGG AGGTGCAGCATG AGTATGGAGCTGATG ECS88_5008 4963156 - 4963380 + | conserved hypothetical protein from phage origin ECS88_5009 4963338 - 4964195 + | replication protein from phage origin yfdN 4964198 - 4964686 + | conserved hypothetical protein; CPS-53 (KpLE1) prophage ECS88_5011 4964653 - 4965012 + | conserved hypothetical protein from phage origin with LexA DNA binding domain ECS88_5012 4965009 - 4965398 + | Crossover junction endodeoxyribonuclease from phage origin TERM 6600 4965393 - 4965379 - f 77 -7 -4.51097 | opp_overlap 4965380, overlap 4965380 GTAAGTACGAGAAAA CGGCGG GTG CAGCCG CCTGATTAAGAGGAG TERM 6601 4965592 - 4965569 - g 73 -9.6 -3.62597 | overlap 4965570 CTGAGCGTTTAATAA GCGAGTTGCA GATT TGCAACTCGG TCAATATAGAGCCAG TERM 6602 4965591 - 4965570 - g 81 -13.1 -2.77344 | overlap 4965569 TGAGCGTTTAATAAG CGAGTTGCA GATT TGCAACTCG GTCAATATAGAGCCA ECS88_5013 4965418 - 4966215 + | conserved hypothetical protein from phage origin TERM 6603 4966897 - 4966917 + G 72 -4.6 -4.66537 | overlap 4966900 GCTGGCGCTGAAAGT GGATCCGG AGTCG CCGGAGTC TTTTATGTTACGCCC ECS88_5014 4966217 - 4967212 + | hypothetical protein ydfT 4967226 - 4967978 + | putative antitermination protein Q; Qin prophage TERM 6604 4968112 - 4968080 - T 76 -4.2 -5.08601 | gap 1, opp_overlap 4968088, overlap 4968083 4968088 CGACGTTAAGAAAAA GTAGAAAA-CCCGCT GATG AGCGGGTTTTTGTGC TTTAGATAGGGTAAT TERM 6605 4968108 - 4968083 - T 76 -10.5 -3.39061 | opp_overlap 4968088, overlap 4968080 4968088 CGTTAAGAAAAAGTA GAAAACCCGCT GATG AGCGGGTTTTT GTGCTTTAGATAGGG TERM 6606 4968103 - 4968088 - T 91 -10.4 -4.73912 | opp_overlap 4968088, overlap 4968083 4968080 AGAAAAAGTAGAAAA CCCGCT GATG AGCGGG TTTTTGTGCTTTAGA TERM 6607 4968088 - 4968103 + T 93 -10.4 -5.04325 | opp_overlap 4968088 4968083 4968080 AGAAAAAGTAGAAAA CCCGCT GATG AGCGGG TTTTTGTGCTTTAGA cspF 4968606 - 4968394 - | cold shock protein; Qin prophage cspB 4968907 - 4969122 + | cold shock protein; Qin prophage TERM 6608 4969407 - 4969420 + F 100 -9.5 -5.60689 | opp_overlap 4969407 TACCACAATATTAAA CCCGC TCAG GCGGG TTTTTTATTATCTGC TERM 6609 4969420 - 4969407 - f 81 -9.5 -3.98159 | opp_overlap 4969407 TACCACAATATTAAA CCCGC TCAG GCGGG TTTTTTATTATCTGC essQ 4969875 - 4970090 + | putative S lysis protein; Qin prophage TERM 6610 4970571 - 4970548 - g 100 -5.2 -5.94597 | opp_overlap 4970548 GAAGATGAAAAAAAA CGCCGCGA TGAGCAGT TTGCGGCG TTTTACGATTATTGC TERM 6611 4970548 - 4970571 + G 76 -7.4 -4.24123 | opp_overlap 4970548 GAAGATGAAAAAAAA CGCCGCGA TGAGCAGT TTGCGGCG TTTTACGATTATTGC ECS88_5019 4970074 - 4970646 + | hypothetical protein ydfQ 4970968 - 4971501 + | putative membrane-associated lysozyme; Qin prophage ydfP 4971498 - 4971995 + | conserved hypothetical protein; Qin prophage cspI 4972359 - 4972571 + | cold shock protein; Qin prophage TERM 6612 4972779 - 4972792 + F 91 -8.1 -5.31059 | opp_overlap 4972775 4972778 4972779 AAAGTGAAAATGAAG GCTCC TTCG GGAGC TTTTTTGCTTAGTGT ECS88_5023 4972804 - 4973073 + | hypothetical protein ECS88_5024 4973153 - 4973419 + | hypothetical protein TERM 6613 4973485 - 4973500 + F 82 -6.8 -4.95302 | opp_overlap 4973477 4973485 CAAATTACCCATAAA CCTCGT TTTT ACGGGG TTTTGTTATATTTAA ECS88_5025 4973715 - 4973921 + | hypothetical protein ECS88_5026 4974474 - 4974965 + | conserved hypothetical protein from putative prophage ECS88_5027 4974965 - 4977067 + | putative DNA packaging protein of putative prophage ( terminase large subunit) TERM 6614 4977212 - 4977224 + G 71 -10.5 -2.90075 | GGCAGGAGTGGGAGC GCCGC CTT GCGGC TCTGATTACACGACG ECS88_5028 4977058 - 4977276 + | conserved hypothetical protein from putative prophage TERM 6615 4977771 - 4977797 + GF 74 -7.2 -4.1822 | opp_overlap 4977743, overlap 4977772 TCTGCCGGTGTTCAT TTCTGGCTGGAG GCG CTCGAGCCGGAC TTTATTCCCATGACC TERM 6616 4977772 - 4977796 + GF 76 -10.7 -3.10611 | opp_overlap 4977743, overlap 4977771 CTGCCGGTGTTCATT TCTGGCTGGAG GCG CTCGAGCCGGA CTTTATTCCCATGAC TERM 6617 4977912 - 4977892 - gf 100 -12.5 -4.37092 | ATCTGGTGTATAAAA GCCGTCCCG TAT CCGGACGGC AGATGGAAACCAAAG TERM 6618 4978714 - 4978673 - g 70 -5.1 -4.33165 | gap 1, overlap 4978674 CGAAATTGATGAAAA CCGCAAGCTGGATCTGGTAT TTG ATACC-GATCCGGCCAGTGA TAAAGGAGGCAGCAG ECS88_5029 4977204 - 4978784 + | putative portal protein (head-tail preconnector protein) from putative prophage TERM 6619 4978941 - 4978966 + GF 100 -14.1 -4.7373 | opp_overlap 4978933, overlap 4978933 TATTAATTCACCGGG TGGCGATGTCT TTGA AGGCATCGCCA TTTTTAATGCACTGA ECS88_5030 4978537 - 4980756 + | putative ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp) TERM 6620 4980781 - 4980792 + F 100 -7.2 -5.64274 | ACAACAACTCTGATG GCCC GTAA GGGC TTTTTTTGTACCTGA TERM 6621 4980829 - 4980811 - g 73 -11.7 -2.75844 | opp_overlap 4980827, overlap 4980810 4980813 TTTTGTACCTGAAAT CAGCCCC TGAAC GGGGCTG TGCGGAGACAGTTAT TERM 6622 4980909 - 4980874 - g 71 -2.4 -5.01845 | TAGAAGAAGGAAAAA CGGTGGCGATTGTTGC CAGT GCAGCCATCAGCAGCG GAGATCTGGTGCAGG TERM 6623 4981100 - 4981082 - g 95 -14.6 -3.16683 | opp_overlap 4981076 4981088 AGTTCAGCTGACTAA CAGCGGCT CTG AGCCGCTG GTCGGGGTTGTCTGG ECS88_5031 4980798 - 4981166 + | conserved hypothetical protein from putative prophage TERM 6624 4981345 - 4981357 + G 70 -6.9 -4.06419 | GGATACCGCCCACGG CGCGG GGA TCGCG TTGTTTATGACGGAC ECS88_5032 4981159 - 4981434 + | conserved hypothetical protein from putative prophage TERM 6625 4981565 - 4981529 - g 72 -8 -3.86897 | gap 1 CGCATGGGCGATAAA CCGTGTGGC-ACAGAAA GCGG TCTCGGTTGCCACCCGG CAGGTTGCCGGGAAT ECS88_5033 4981446 - 4982024 + | Minor tail protein Z (GPZ) of prophage TERM 6626 4982075 - 4982092 + GF 74 -3.3 -5.01732 | overlap 4982076 CGCCTTCGGGAACAG TGTGGAG ACAG CGCCACG TTTTTTGACGGGCTT ECS88_5034 4982009 - 4982422 + | Minor tail protein U ECS88_5035 4982358 - 4983176 + | Major tail protein V TERM 6627 4983197 - 4983214 + G 100 -10.5 -5.03314 | CGATACTCATCATTT GCCCCGG TTAT TCGGGGC TTTTTTGCAGGTGGA ECS88_5036 4983195 - 4983623 + | putative minor tail component of putative prophage TERM 6628 4983835 - 4983848 + GF 74 -8.1 -4.07568 | overlap 4983811 CAGTGATGCTGCGGT GGCTG ATTT CAGCC TTTTACCGGAAGAGA ECS88_5037 4983632 - 4983961 + | putative minor tail protein T of putative prophage TERM 6629 4984467 - 4984450 - gf 74 -7.7 -4.11394 | AGGTTACTGCGAAAA CCCGTGT TCTT ACACAGG CTGAGGAAGAGGCTA ECS88_5038 4983903 - 4986998 + | putative tail length tape measure protein from putative prophage TERM 6630 4987193 - 4987224 + G 89 -13.1 -3.35679 | gap 1, overlap 4987187 4987189 4987188 TTTCTGGAACGGCAC GGTGGCGTCCG-TG CATTT CAGTGGACGCCACC TTATGACTGGAAACC ECS88_5039 4986998 - 4987327 + | Minor tail protein M TERM 6631 4987561 - 4987577 + GF 72 -7.9 -3.91144 | opp_overlap 4987543 CAAGGGCAGTGCTGC CCGTCCG ACA CTGACGG TTTCTAACCTGTACG TERM 6632 4987648 - 4987668 + GF 90 -9.7 -4.42653 | overlap 4987650 CGGCGGAACGGTGGT CCGGCGTAA GGT TTACGCCCG TTTTCTGGATGCGGT TERM 6633 4987650 - 4987666 + GF 74 -10.9 -2.54745 | overlap 4987648 GCGGAACGGTGGTCC GGCGTAA GGT TTACGCC CGTTTTCTGGATGCG TERM 6634 4987795 - 4987820 + GF 72 -5.3 -4.57073 | gap 1, overlap 4987797 CTCTTTTGTACTGTC CA-CGCCGACGG AAA CGGACGGCGCTG TTTTTCCGGGACGTA ECS88_5040 4987337 - 4988035 + | Minor tail protein L TERM 6635 4988066 - 4988050 - gf 71 -9.5 -3.02649 | overlap 4988052 ATCCCATGACAGAGA CAGAATC AGC GATTCTG GCGCACGCCCGGCGA TERM 6636 4988545 - 4988575 + GF 76 -6 -4.45945 | overlap 4988544 4988542 AGGTGGCGTTGTCAT CAGCACAACCGGGC GAT GTGCTGCTGTGCTG TTTTGGTTCATCGGT ECS88_5041 4987998 - 4988783 + | putative tail fiber component K of prophage ECS88_5042 4988681 - 4989328 + | Tail assembly protein I from putative prophage TERM 6637 4989363 - 4989350 - g 73 -9.5 -3.60098 | opp_overlap 4989345 4989350 ACGTTTTATGTGAAA CCGCC TCCG GGCGG TTTTGTCGTTTATGG TERM 6638 4989350 - 4989363 + G 91 -9.5 -4.64846 | opp_overlap 4989350, overlap 4989345 ACGTTTTATGTGAAA CCGCC TCCG GGCGG TTTTGTCGTTTATGG TERM 6639 4989539 - 4989519 - g 90 -7.5 -4.7497 | overlap 4989537 TGGATGGATTAAAAA GCGTGCTGC TGA ACAGTACGC CAGTGCTGGACACTG ECS88_5043 4989344 - 4992784 + | Host specificity protein J TERM 6640 4992804 - 4992821 + F 100 -12.7 -5.4505 | opp_overlap 4992794 4992795 4992802 TATAACCCATATACG GGCGCCA GAAA TGGCGCC TTTTTTATTGCAGAA TERM 6641 4993284 - 4993274 - g 81 -6.8 -4.70626 | CAACAAGGGGAAAAA GCAC GAT GTGC TGACCGGAAGTGATG ECS88_5044 4992852 - 4993451 + | Putative Lom-like outer membrane protein of phage origin TERM 6642 4993498 - 4993479 - f 79 -12.1 -2.79501 | opp_overlap 4993479 CACAGTGTTATGACA GCCCGCC GGTTCA GGCGGGC TTTTTTGTGGAGTGG TERM 6643 4993479 - 4993498 + F 100 -12.1 -5.26316 | opp_overlap 4993479 CACAGTGTTATGACA GCCCGCC GGTTCA GGCGGGC TTTTTTGTGGAGTGG TERM 6644 4993548 - 4993532 - g 71 -3 -4.77036 | overlap 4993534 TGGCAGCAGTAAAAA TCTCAG GTGTG CTGAAA GATGGTGCGGGAAAA ECS88_5045 4993510 - 4995894 + | conserved hypothetical protein, putative side tail fiber protein homolog from prophage TERM 6645 4995926 - 4995941 + G 81 -10.4 -3.92641 | opp_overlap 4995925 CAAATTTGCAGACAG GGCCGA CTTT TCGGCC TTTATGGATAGCATT ECS88_5046 4995894 - 4996175 + | hypothetical protein ECS88_5047 4996185 - 4996889 + | hypothetical protein ECS88_5048 4996900 - 4997193 + | hypothetical protein pinR 4998011 - 4997421 - | putative site-specific recombinase; DNA invertase; Rac prophage ydfK 4998594 - 4998328 - | conserved hypothetical protein; putative DNA-binding transcriptional regulator; Qin prophage TERM 6646 4999101 - 4999068 - R 85 -8.2 -4.59853 | gap 1, opp_overlap 4999068 TGAATGGTTGAAAAA CCGCAGACACGTCGT ATGCA AGAACGTG-CTGCGG TTGGCTGGTGAACTT ECS88_5053 4999418 - 4999170 - | DNA damage-inducible protein in prophage (dinI-like) TERM 6647 4999432 - 4999451 + H 80 -7.2 -4.46215 | overlap 4999430 ATAAAAATCCCTCTA CACTGTGT TTGT ATACAGTG TTATTTTTAACTGTA TERM 6648 5000139 - 5000125 - g 72 -7.1 -4.17425 | opp_overlap 5000125, overlap 5000117 AGAACGAGCTGAAAA TCGGC TGTGC GCCGA TCACCTGGCCGATTG TERM 6649 5000563 - 5000542 - g 70 -5.9 -4.18018 | gap 1 GCTTCGTATTTAAAA TTCAGG-CCA ACA TGGACCCGAA ACACCGCGACCGCGT prfC 4999611 - 5001224 + | peptide chain release factor RF-3 TERM 6650 5001235 - 5001260 + F 89 -14.7 -2.68338 | overlap 5001233 5001232 ATTAATTCTTGCCTC CAGGGCGCGGT AGCC GCTGCGCCCTG TCAATTTCCCTTCCT osmY 5001617 - 5002222 + | periplasmic protein ytjA 5002331 - 5002510 + | hypothetical protein TERM 6651 5002560 - 5002542 - f 100 -14.6 -3.67989 | opp_overlap 5002542 AAAATTTTATCCAAA GCCAGTCC AGC GGACTGGC TTTTGCGGTTTTAGC TERM 6652 5002542 - 5002560 + F 100 -14.6 -4.28049 | opp_overlap 5002542 AAAATTTTATCCAAA GCCAGTCC AGC GGACTGGC TTTTGCGGTTTTAGC TERM 6653 5002999 - 5003009 + G 74 -8.2 -3.90744 | opp_overlap 5002997 CGTTGCAAATGGATA CCGC CGC GCGG TTGTTTGACAGCGGC yjjU 5002632 - 5003705 + | putative esterase yjjV 5003702 - 5004481 + | putative DNase TERM 6654 5004547 - 5004491 - T 76 -10.3 -3.30124 | opp_overlap 5004491 5004492 5004535, overlap 5004492 5004525 5004526 CCGTAGGCCGGATAA GGCGTTCA-CGCCGCATCCGGCAGTTG GCGCA CAA-TGCCTGATGCGACGCTTAACGCG TCTTATCATGCCTAC TERM 6655 5004492 - 5004546 + T 77 -11.6 -2.56747 | opp_overlap 5004491 5004492 5004525 5004526, overlap 5004491 5004535 CGTAGGCCGGATAAG GCGTTCA-CGCCGCATCCGGCAGTTG GCGCA CAA-TGCCTGATGCGACGCTTAACGC GTCTTATCATGCCTA TERM 6656 5004546 - 5004492 - T 86 -13.8 -2.57931 | opp_overlap 5004492 5004491 5004535, overlap 5004491 5004525 5004526 CGTAGGCCGGATAAG GCGTTCA-CGCCGCATCCGGCAGTTG GCGCA CAA-TGCCTGATGCGACGCTTAACGC GTCTTATCATGCCTA TERM 6657 5004600 - 5004639 + T 77 -11.5 -2.62003 | gap 1, opp_overlap 5004592 5004593 5004626 5004627, overlap 5004599 5004631 CGGATAAGGCGTTCA CGCCGCATCCGGCAGTTG GCGCA CAA-TGCCTGATGCGACG CTTGTCGCGTCTTAT TERM 6658 5004631 - 5004650 + T 77 -10 -3.4252 | opp_overlap 5004593 5004627 5004626, overlap 5004600 5004599 TGGCGCACAATGCCT GATGCGAC GCTT GTCGCGTC TTATCATGCCTACAA TERM 6659 5004732 - 5004751 + T 77 -10 -3.4252 | opp_overlap 5004728 5004727, overlap 5004701 5004700 CGGCGCATAATGCCT GATGCGAC GCTT GTCGCGTC TTATCATGCCTACAG TERM 6660 5004849 - 5004795 - T 74 -10.8 -2.57931 | opp_overlap 5004794 5004795 5004838, overlap 5004794 5004828 5004829 CGTAGGCCGGATAAG GCGT-TCGCGCCGCATCCGGCAGTTG GCGCA CAA-TGCCTGATGCGACGCTTGACGC GTCTTATCAGGCCTA TERM 6661 5004795 - 5004849 + T 74 -10.8 -2.5294 | opp_overlap 5004795 5004794 5004828 5004829, overlap 5004794 5004838 CGTAGGCCGGATAAG GCGTT-CGCGCCGCATCCGGCAGTTG GCGCA CAA-TGCCTGATGCGACGCTTGACGC GTCTTATCAGGCCTA TERM 6662 5004861 - 5004829 - T 79 -12 -2.57344 | opp_overlap 5004795 5004794 5004838, overlap 5004795 5004794 5004828 CAGTTGGCGCACAAT GCCTGATGCGACGC TTGAC GCGTCTTATCAGGC CTACAAGTCTGTGCC yjjW 5005764 - 5004901 - | putative pyruvate formate lyase activating enzyme TERM 6663 5005466 - 5005498 + gT 76 -10.7 -3.01924 | gap 1, opp_overlap 5005461 TGGCTAAGCACTTCG T-CCACGCTCATGG ATTGCG CCATGGGCGTGGCA TGTTGCGGACACCTC TERM 6664 5005711 - 5005687 - GT 76 -6.4 -4.57569 | gap 1, overlap 5005689 GCAGCCCTGCAAAAA CAGAGCCAGAC GACT GCCTGGCCC-G TCAACGCAGGAGAAG TERM 6665 5005710 - 5005689 - GT 82 -10.1 -3.90316 | overlap 5005687 AGCCCTGCAAAAACA GAGCCAGAC GACT GCCTGGCCC GTCAACGCAGGAGAA yjjI 5007286 - 5005736 - | hypothetical protein TERM 6666 5008153 - 5008133 - g 88 -5.3 -5.24129 | TGGGCGTAGAAAAAA CCGTTGGTT TCA AACCGGCGG GCGGCGTGCGTACTG deoC 5007544 - 5008323 + | 2-deoxyribose-5-phosphate aldolase, NAD(P)-linked TERM 6667 5008904 - 5008946 + G 72 -8.5 -3.85698 | gap 1, overlap 5008893 AAGACGTCGGCGTGG CGATTATCGGTCAGA-CCAG TTCA CTGGCTCCGGCTGATAAACG TTTCTACGCGACCCG deoA 5008450 - 5009772 + | thymidine phosphorylase deoB 5009824 - 5011047 + | phosphopentomutase TERM 6668 5011056 - 5011075 + F 90 -10.7 -4.38927 | GTTCTGATGGATTTG GGCGGAG CGTTGA CTCCGCC TTTGTTATGTCACAA deoD 5011104 - 5011823 + | purine-nucleoside phosphorylase TERM 6669 5011857 - 5011880 + F 100 -12.4 -5.28561 | CGATTGTCGTGTGAA GCCGGAGTGG GAGA CTGCTCCGGC TTTTTATTATCTATT TERM 6670 5013287 - 5013269 - g 85 -10.3 -4.16284 | ACATTGCGCAAGAAA TGCCGGA AAAAA TCCGGCA AATCGAAGAGAAAGT yjjJ 5011990 - 5013321 + | putative DNA-binding transcriptional regulator TERM 6671 5013322 - 5013301 - T 85 -10.1 -4.25401 | opp_overlap 5013301 CAAATCGAAGAGAAA GTTGCCCGC ATGG GCGGGTAAC TACCTTACAGCCCCC TERM 6672 5013301 - 5013322 + T 81 -12.3 -2.52464 | opp_overlap 5013301 CAAATCGAAGAGAAA GTTGCCCGC ATGG GCGGGTAAC TACCTTACAGCCCCC lplA 5014338 - 5013322 - | lipoate-protein ligase A TERM 6673 5013944 - 5013956 + g 70 -6.9 -4.07687 | overlap 5013945 CCTGAGACTTTGCGA TCGCC TTC GGCGG TTTTCACCACCAGAT ytjB 5015010 - 5014366 - | hypothetical protein TERM 6674 5014708 - 5014722 + g 70 -10 -3.24188 | opp_overlap 5014707 5014706 GCTTTCGCCAGAACG GGCGAT AAG ATCGCC TTGCTCATCATATAC TERM 6675 5016026 - 5016011 - g 87 -4.6 -5.29385 | opp_overlap 5016020 5016021, overlap 5016020 AAGTGAATGAAAAAA CGGAAG TCAC CATCCG TCACGCTGACCTGAT serB 5015116 - 5016084 + | 3-phosphoserine phosphatase TERM 6676 5016922 - 5016909 - g 80 -5.2 -4.88067 | ACGCAGCCATAAAAA CCGC TTCGGC GCGG TGAATGAGCTGGGTG radA 5016133 - 5017515 + | repair protein radA homolog TERM 6677 5017684 - 5017660 - g 72 -5 -4.67641 | gap 1, overlap 5017661 ATGCCAAAATTAAAA GCC-CCAGC GCACAAAA GCTGGAGGC ATTGCACCGTTATTT TERM 6678 5018414 - 5018395 - g 70 -5 -4.4891 | gap 1, opp_overlap 5018395, overlap 5018397 CCGACTACGATAAAA TCGCGC-TG GGA CATGCGCAA TATATTGATTTTGCA nadR 5017536 - 5018768 + | bifunctional DNA-binding transcriptional repressor and NMN adenylyltransferase TERM 6679 5018976 - 5018956 - g 70 -4.7 -4.58563 | overlap 5018957 GAATTACAAAAAGAA CTCATCGGA ACT CCCGATAAA GGTGATCTCATTCAG ECS88_5072 5018782 - 5019192 + | hypothetical protein TERM 6680 5019233 - 5019219 - g 70 -6.4 -4.15565 | TTGATGAGTTGAAAA CCTCTC TGG AAGAGG CTGTCGAGATTAAAC ECS88_5073 5019194 - 5019478 + | hypothetical protein TERM 6681 5019491 - 5019524 + T 100 -13.1 -4.15508 | opp_overlap 5019491 5019493 TAATCATTTAACTAA TACCGGATGCGATGC TGGT GCGCCGCATCCGGCA TTTTACGCATTACTT TERM 6682 5019524 - 5019491 - T 100 -15.3 -3.3903 | opp_overlap 5019491, overlap 5019493 TAATCATTTAACTAA TACCGGATGCGATGC TGGT GCGCCGCATCCGGCA TTTTACGCATTACTT TERM 6683 5019522 - 5019493 - T 100 -15.7 -3.25919 | opp_overlap 5019491, overlap 5019491 ATCATTTAACTAATA CCGGATGCGATGC TGGT GCGCCGCATCCGG CATTTTACGCATTAC yjjK 5021201 - 5019534 - | fused putative transporter subunits of ABC superfamily: ATP-binding components slt 5021408 - 5023345 + | lytic murein transglycosylase, soluble TERM 6684 5023416 - 5023390 - f 88 -12.2 -3.4252 | overlap 5023391 CTTTAGCGAGTACAA CCGGGGGAGGCA TTT TGCTTCCCCCGC TAACAATGGCGACAT TERM 6685 5023415 - 5023391 - f 93 -15.7 -2.65298 | overlap 5023390 TTTAGCGAGTACAAC CGGGGGAGGCA TTT TGCTTCCCCCG CTAACAATGGCGACA TERM 6686 5023477 - 5023496 + G 72 -6.4 -4.3898 | opp_overlap 5023477 5023476 GCGATGGCAGAACAG CGTCACCA GGAG TGGTTACG TTTTGTCGACCTGCT trpR 5023435 - 5023761 + | DNA-binding transcriptional repressor, tryptophan-binding TERM 6687 5023824 - 5023781 - T 70 -10.3 -2.62616 | gap 1, overlap 5023783 5023809 GTAGGCCTGATAGGA CATGGCGCATCAGGCA-TCG TGCAC CGAATGCCGGATGCGGCGTG AACGCCTAATCAGGC yjjX 5024361 - 5023834 - | thiamin metabolism associated protein TERM 6688 5024195 - 5024210 + g 72 -8.2 -3.76224 | TTGGCTACCCTATTT CGTGCG CCAG CGCGCG TTTCCTCACTGCCAA ytjC 5024413 - 5025060 + | phosphoglyceromutase 2, co-factor independent rob 5025926 - 5025057 - | DNA-binding transcriptional activator TERM 6689 5026583 - 5026571 - g 74 -6.2 -4.56775 | opp_overlap 5026570 5026571 AGGTTCGCCGAAAAA CGCG ATTAG CGCG GTTCCTGTCATGCCG creA 5026137 - 5026610 + | hypothetical protein creB 5026623 - 5027312 + | DNA-binding response regulator in two-component regulatory system with CreC creC 5027312 - 5028736 + | sensory histidine kinase in two-component regulatory system with CreB or PhoB, regulator of the CreBC regulon TERM 6690 5029468 - 5029482 + G 77 -2.8 -5.13521 | opp_overlap 5029468 GACCTTAACCAGCAA CTGG CCGCATC CCAG TTTTTTAGGTGATTT creD 5028794 - 5030146 + | inner membrane protein TERM 6691 5030186 - 5030157 - T 100 -18.1 -4.94222 | opp_overlap 5030163, overlap 5030163 AATAAGGTAGAAAAA TAAAAACGGCGCT AAAA AGCGCCGTTTTTA TTGACGGTGGTAAAG TERM 6692 5030163 - 5030180 + T 100 -12.7 -5.07486 | opp_overlap 5030157 5030163 GTAGAAAAATAAAAA CGGCGCT AAAA AGCGCCG TTTTTATTGACGGTG TERM 6693 5030180 - 5030163 - T 100 -12.7 -5.69262 | opp_overlap 5030163, overlap 5030157 GTAGAAAAATAAAAA CGGCGCT AAAA AGCGCCG TTTTTATTGACGGTG arcA 5030922 - 5030206 - | DNA-binding response regulator in two-component regulatory system with ArcB or CpxA TERM 6694 5030431 - 5030443 + g 71 -9.1 -3.44051 | opp_overlap 5030418 CATGGCGCGGAACTC GCTGC GCG GCAGC TTGTACTGCTCGCCA yjtD 5031558 - 5032244 + | rRNA methyltransferase